gi|159162017|ref|NC_006814.3|  Lactobacillus acidophilus NCFM chromosome, complete genome. [asmbl_id: NC_006814].1993560, gc%: 34.71%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
863952..863969                     attL                                                                                 N/A                 TAAAAACAAAATAAAAAG
complement(869317..870294)         PHAGE_Parame_FR483: hypothetical protein FR483_N093R; LBA0892; phage(gi155370191)     1e-25               MCTSIIFSPKDHYFGRNLDLEITFGQQVVITPRNYTFKFRKMPSLKKHYAMIGISLDMDDYPLYFDATNEKGLGMAGLNYPGNATYYEEKENKDNIASFEFIPWILGQCSTISEVKDLLSRINIADLNFSEKMQASSLHWLIADKTGTSLVVETDKDGMHIYDNPVGCLTNNPQFPKQLFNLNNYADVSPKMPKNNFSDKVNMAGYSRGLGSHNLPGGMDSESRFVRVAFNKFNAPIAETEEENIDTYFHILHSVEQQKGLDEVGPNSFEYTIYSDGTNLDKGIFYYTTYSNKQINVVDMNKEDLDSSNLITYDMLDKTKFNHQN
870429..870517                     tRNA                                                                                 N/A                 GGAGTGTTGGCAGAGTGGTAATGCACCGGACTCGAAATCCGGCGAACCAAGTTTTCCTTGGCGCGCAGGTTCAAATCCTGTACACTCCT
complement(870710..871660)         PHAGE_Lactob_Sha1: phage integrase; LBA0893; phage(gi418489824)                      7e-72               MEVAKDQQQISDANPVFADYFKSWYGTYKIPGKSRTTVVRYETIYKKLNAYYGKAKLAKVTRKSYQIFMNEYGKKHAKDTVYKTNGSIRSCVRDGVADGIIQKDFTQKINLTWNSERTRKIDYLNYEEIQSLKNSLLHNIKHTYISRYMILTALYTGMRPGEIAVLTWSDIDFKNQTININKSYNHDKGRVDNYDSSEIDKSTKNTNSVRIIKVDKKFLDILSQLKQNDHEKIFIGKDGTIPTSNAVNKVWRKQLEKLNIDKPSFHFHSVRHTHVALLPFKGVPLYAISKRLGHANMSTTAKKYAYMLDELKQQVR
complement(871880..872080)         hypothetical protein; LBA0894                                                        N/A                 MGPMRTLTVAIDWILIILFVISIILLIYALVKKNKKMAKYAGIAAAIIFILLFIAMRFALTVKPGQ
complement(872083..872736)         PHAGE_Lactob_Lj965: putative superinfection immunity protein; LBA0895; phage(gi41179219)     2e-05               MFTYLLITIFGIGLLIWAFWYDKNMFKPEKKKNGKMTKPLHTRWYFWVLVVFSIVGGIGNMLGLGADDDDSDNNSAQTVQTSKKAKQSKAENHSKAKKSGTKKSKEISDEEKEAAALLLLRKNFKGKAKVWYDSDNKAFMIQPTGTEFKEELLDIIATQDTSDWKDLTDSMDSLSRSLYKNLQLADFVSIVNPDNPDKVLYSSLNGHSEYDFLKDDE
complement(873265..873603)         PHAGE_Lactob_Lj965: putative repressor; LBA0896; phage(gi41179224)                   1e-26               MTNQTNLAQKITNYREAQDMTQAELADKSGIERTALNKIEKGTRKVSSDELKAIALALNISADTLLDLNGSELTWADLGMPYGGEIPDELKDTYADIARGYFKRHPEYLNKN
873767..873970                     PHAGE_Lactob_Lj965: putative cro repressor; LBA0897; phage(gi41179225)               1e-16               MKKEINLALIRERRLKRGFSNEDMAKSLGLASSDKYFRREHGIYKFQASELPALSKKLGIPLEKFFI
874230..875621                     transporter protein; LBA0899                                                         N/A                 MGKKNKVPQLSRSMTAGQMEMISLGGAIGVGLFMGSTSTIKWTGPSVLLAYMFVGLILYIVMRALGEMLYINPGTGSFADYATEYVHPLAGYLAEWANVFEYIVVGMSEVVAATEYLKYWWPNISALWSGVIIIAFLLLANLASAKAYASLEFWFAMIKVITIILMIILGFIVIFFGVGNGGKPIGFSNLWAHGGFFTGGVKGFFFSMSIIVGSYEGIELLGISAGEVANPQKAIVKSVKSVLLRILIFYVGAIFVIVTIYPWNKLSSLGSPFVTTFAKVGITAAASIINFVVLTAALSGANSGIYSSSRMLFKLSHDNEAPSVFKHISKRIVPDRAIMGISGGIFIGFILNIIASQFNHSASDLFVIVFSSSVLPGMIPWFVILLAELRFRRHNQDMMKDHPFKLPLYPFSNYFAFLMLLVIVIFMFINPDTRISVITGALVLIVATIVYLVRHKDEFSKNN
875749..876705                     PHAGE_Bacill_BCP78: putative thymidylate synthase; LBA0901; phage(gi410492791)       6e-79               MAILEQPYLDLINKIMIEGHDKNDRTGTGTRSYFGAQMRFDLSKGFPILTTKKVPFGLIKSELLWFLRGDTNIRFLLEHKNHIWDEWAFKNWVNSDEYTGPDMTDFGLRSQSDPEFNKIYQAELKKFDRRILDDENFAKKYGNLGDVYGAQWRHWQKRDGSFIDQIENVIEQIKNNPDSRRMIVTAWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARETGLQVGEFIHTLGDAHIYSNHFSQVKEMLSRKPYESPQLWLNPEKKHIEDFDMQDIKLVDYKHHGTIKAPVAV
876715..877218                     PHAGE_Bacill_phiAGATE: putative dihydrofolate reductase; LBA0902; phage(gi448260875)     6e-18               MIEYVWAEDKEKNIGLNGHLPWYLPADMKHFKEVTINHPIIMGRKTFESFPNLLPKRKHIVLTHNEELKNKYQNNDQVTILPTVEDLHNFVAEHQDERMCAIGGVSIFNALMDQVEVLEKTEIDAIFEADTKMPEIDYSRFNLVAKKHYEPDEKNKYPYTFLTYKLK
890013..890030                     attR                                                                                 N/A                 TAAAAACAAAATAAAAAG