gi|53851018|ref|NC_006357.1|  Human papillomavirus type 62, complete genome. [asmbl_id: NC_006357].8092, gc%: 46.05%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1..447                             PHAGE_Human__90: putative transforming protein E6; HPV62gp1; phage(gi22138123)       3e-37               MTAGPARPTNLFLLCKEYDVDLDDLHLTCIFCKTDLSAGELLSFAIRELHVVRRKDWPFGVCAACLLREIKVRELRRWQHSCFGITVEEETGSPLAQIYIRCHACCMPLTCQEKEYQVERGVHFHKIAGVWTGRYRNCRGVCTARQQL
423..713                           PHAGE_Human__90: putative transforming protein E7; HPV62gp2; phage(gi22138124)       2e-25               MHGQAATIKDIVLQERPDVVDLHCHEQLLDSSEEEVDDRDSAEQPVERAQQAHRVVTTCGICNCLVRLVVLSGDAELRRLQQLLTDALEIVCPGCA
719..2677                          PHAGE_Human__90: putative replication protein E1; HPV62gp3; phage(gi22138125)        0.0                 MADAEGTNGGDGIDGTNGAGGWFMVEVIVEQTTGYQVSSDEDENSIDTGEDLVDFIDNTRHPGDGQEVPLELFVQQNARDDAAAVQALKRKYTYSPATSSCVSWVDCELSPRLNAISLDRGHERARRRLFDQDSGYGHTQVDTGPSEGQVPGDTQQTDENVEQEVQEDVRGGGDGEPERSVDVQQSQERTASIVELLKTSNLRATLLSKFKELYGLAFGELVRQFKSDKSVCGDWVVCAFGVYHAVAEAIKTLIQPVCLYAHIQSQTCSWGMVILMLIRFKCSKSRETVAKCIGTLLNVPDKQMLIEPPKIRSAPCALYWFRTAMGNASEILGETPEWITRQTVVGHAMQETQFSLSVLVQWAYDNDIVDESDLAYQYALLGNDDPNAAAFLASNCQAKYIKDAITMCKYYKRAEQKRMSMAQWIAHRSQKVADTGDWRPIVRFLRYQKIEFVTFMSALKMFLRNIPKKSCIVIYGPSDTGKSLFCMSLLKFLGGAVISYVNSTSHFWLSPLTDAKVGLLDDATYPCWVYIDTHLRSVLDGNQISIDRKHKNLTQIQCPPLFITTNINPLEDANLKYLHSRIAVFHFMYKCPLDDKGDPVYQFNNENWKSFFQRSWAQIEGTPEEEEEEEEEDNGNTGRPFRCVPGETNRLL
2619..3758                         PHAGE_Human__90: putative regulatory protein E2; HPV62gp4; phage(gi22138126)         1e-96               MATLADRLDACQEKLIDFYEKDSDKLDDQVKHWQCIRLEHAILFKARQAGLTQLGHQVVPALSVTKGKAHLAIEVHLALKSLYASVYKDEPWTLQSTSLDMWNAKPQKCWKKKGRTVTVKFDCEDSKIMEYVSWGYIYVQTDTEQWCKVQGKVSYEGLYYELEGHRHYYVVFADEAKKYGDLDKWEVHWGNTVIYEPCNSVSSTQDIVREIPPAETTRLLHTPEPTTSAQHVGTTQTTKATPVPTPPCKRQRVHGHGAERQPTVTEADSRVVDNNEYGTNSYPDSTKGRHVCDGGAAPVIHLRGEPNKLKCLRYRLRGSVPHLFVKASSTWHWTCGDSTEKDAFVTFWYANIEQRTEFLQRVTIPKGIQAMQGYMTMCM
3202..3516                         PHAGE_Human__90: putative E4 protein; HPV62gp5; phage(gi22138127)                    7e-13               MNHATLYLAPRTLCERYPLLKLLDCYTPPNPPPVPSTWAPPRPPKPPRCRRRLVSDSESTDTERSGSPPLQKRTAGSWTITSTGPTVTLTAQKDDTCVTVALHL
4372..5799                         PHAGE_Human__90: putative minor capsid protein L2; HPV62gp6; phage(gi22138128)       9e-170              MPKVLHRRKRASATDLYRTCKVSGTCPSDVIPKVEGNTLADKILKWASLGVFFGGLGIGTASGTGGRTGYIPIGGRPPSVVDIGPVSRPPVVIEPVGATDPSIVTLVEDSSIIEAGAVHPNFTGSSGFEVTTSSTATPAVLDISPTGTTVQVSSTNFLNPAYTEPSIIDPPQTGELSGHVLTSTPTAGSHSYEEIPMVTFASNAGTGSEPISSTPLPGVRRVAGPRLGLYTKATQQVPVADPAFVSRPASFATFDNPIYDPEETIIFEHPSIYTPPDPDFLDIVTLHRPALTSRQGTVRLSRVGQRASLRTRSGKRIGARVHFYHDISPIPSTTTGDIELQPLLPSGSSSADTLYDVYADDQHLDAVLQSVPSMSSRPLVPSNATISATSVASSHTNVTVPLSTGLSVPASTGPDVELPQFSVPVSVLTPSFPATTPYSIYIVGSDYYLFPSYIFFPKKHKRLHYFFTDGYVAAW
5777..7288                         PHAGE_Human__90: putative major capsid protein L1; HPV62gp7; phage(gi22138129)       0.0                 MAMWRPGDGKVYLPPTPVSKVLSTDTYVTRTNLFYYGGSSRLLTVGHPYCTLQVGQGKRATIPKVSGYQYRVFRVKLPDPNKFTLPDATLYNPDTERMVWACRGIEVGRGQPLGVGTSGHPLYNRLDDTENTSLLAAANDDSRDNISVDYKQTQLLIVGCKPPIGEHWTKGTLCPNAAPAPTECPPLEFKNTTIQDGDMVETGYGAIDFKSLQESKSEVPLDICTSTCKYPDYLQMAAEPYGDCMFFCLRREQMFARHFFNRHGTMGEALPTDLYMKGTPGSDRQMPGSYIYAPTPSGSMVSSDSQLFNKPYWLQRAQGHNNGICWFNELFVTVVDTTRSTNFTICTASTAAAEYKATNFREFLRHTEEFDLQFIFQLCKIQLTPEIMAYLHNMNKDLLDDWNFGVLPPPSTSLDETYHYLQSRAITCQKGAASPSPKVDPYAQMTFWTVDLKDKLSTDLDQFPLGRKFLLQAGSRPRSVAVSRKRSAPTKQSPTSAKRKRRK