gi|28376974|ref|NC_004567.1| Lactobacillus plantarum WCFS1, complete genome. [asmbl_id: NC_004567].3308274, gc%: 44.47% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 589962..589975 attL N/A GTTACCCTTAAGTA complement(590128..591330) PHAGE_Strept_5: putative phage integrase; lp_0624; phage(gi28876436) 2e-42 MPRQWKPLKRHPGIYEYETKRGKKYGIRRSYTDINHKYRTWSKSGFITWRDADIELKKFEVTLGTGQITASISDTITLQAYFDKVLKRNIDLKLWRPATITQKKNYWNNQLKPVFGNQKINEITRQSYQNFIDQMIKDGYAKNTIITTNSVMQILMNDAVRNDVIVKNKLSGISIDGGKSPSSKTITEKQYNQLMTIAPSVLSKYQYCMLALLTLGERREELMGLQFSSFKFSQWNDEEVCAIQFKKGRTNAEPEGGDLKNNSSYRTIYVRGEMLNICHYAITYSQNIYSKTHRNINDESFLFVNEKTGMPMGVQQANKVLNKVGEATGIHITPHIFRHYFATMALTNGQVATDVMHWLGHSSLQMTQSYTRENVRGALNVFNGMAPTLLGDSDDEHQSL complement(591410..591480) tRNA N/A GCGAGTGTAGTTTAGTGGTAAAACGACAGCCTTCCAAGCTGTAGTCGCGGGTCCGATTCCCGTCACTCGCT complement(591510..592673) PHAGE_Strept_3: putative mitogenic factor; lp_0625; phage(gi28876265) 1e-23 MKKRLTIGAVLLASLALASCGNSTNKSSELSSNSSSLVAAKRKKATSLSESKVKASSESSSTAKTATNNSTQVLTKLVSYTDKESAGPTQNYYWDNGKAKLTNFDSMKAGKYAFSADNQGRSSVAKAMLTYAEYQASKGSRQGTPLDPPSWPSTNPKVAIHYGLTDRVYHGFLYNRSHSIADSLLGSGSYTSEYNFTTGTRPQNVGANQEGGMRYAEELVENYWNTHSNSKNTVSYETTPLYKGNERIPRGSLVDIKSSDNQLNKEVVVINSVEGIKINYNNGSNDAKAYQSSSRSESSKKYVSEAPKKHSETSTTNSSSSVSTKQNSAYTTNGSWTVAASGMVFVSNSNKYYSQVTNPGNYQYISQSSAQADGAQQASRGNQYARP complement(593037..593120) tRNA N/A GCGAGTGTAGTTCAACGGTAGAATGGTTCCTTTAATTCAAATATAGCCTACCTTCCAATGCAGGTTCGACTCCTGCCGCTCGCA complement(593163..593339) prophage Lp1 protein 4; lp_0627 N/A MDNEISKYELIATMKKDIQTFMDSESMLYLKKDSYSTEEYDRMLTEVKDDLKTRLLQK complement(593365..593450) tRNA N/A GCGAGCGTAGTTCAACGGTAGAACAGTACTCCTATGAATTGCTAACTAGATACTTTCAGACGTAGGTTCGACTCCTGCCGCTCGCT complement(593481..594527) PHAGE_Lactob_Lj965: putative superinfection immunity protein; lp_0628; phage(gi41179219) 6e-29 MSKDNAEEYHRSYKAKKPFYKRVWFWALAVIVIFIVGGSLGGKDNSNATNNAGKTTSASDSQNTKVYSTQDLKVTVSKAIVHNTDWLIKGKTKAPNNSKIAAVIIDNSSDAITDIPISTSDDIKWAKVKDGNFSAYIEPLQAFNASKRHAGDTVTVYIVALENYEKKDTDTIPAHVRKQIKKTKPYTLTLTKAQADYQNSLDGSKKDSKKASSSSSKETSSSSNIDKNDDSESLSSSNSSTSSSKVSSEDKAALEKAQDYATEMNMSKQGVYEQLTSSAGEGFSSEAAQYAVNHLTDIDWNANALAKAKDYQSEMSMSRSAILDQLTSSAGEQFTQSQAQYAIDHLPK complement(594557..594925) PHAGE_Bacill_phiAGATE: putative tail lysin 2; lp_0629; phage(gi448260828) 7e-05 MKTKNLALTNGIVGLVGGIILLFGGWFVAGGALSDAATGSATSTSGTVALLNILKIAILALGIIALIYYKGDSRVNTAPGVLLIVGGAIALIPFLGWIGGIIAIIGGSLYLAALKNFSQPQQ complement(594998..595414) PHAGE_Lactob_phig1e: hypothetical protein phig1ep06; lp_0630; phage(gi23455774) 2e-08 MDRVKDIVKAIVNRYHTADPFVIAEKLNIQVEWCDFWAMPLGKNAYDNKEPIILLNNSIKHTPTQYFILGHELGHVIFHEGLIGYYTSVKHGHSKFEREADEFSVGLMGMLFIEENGHIPYSYRELAHQYGVPSDIDD complement(595426..595788) PHAGE_Lactob_phig1e: repressor; lp_0631; phage(gi23455773) 8e-17 MFAERLKELRKREAGLTQERLAMQLGMAKTTLASYEQGKRQPDLETLSKIADRFSVTTDYLLGKNGTPKWATKKDTIDLKDFLEANEGSMTYGGEDLTEEEKQQVRVAMATIFWKRHKHD 595961..596191 PHAGE_Lister_B054: gp42; lp_0632; phage(gi157325326) 2e-05 MRHWLKEWRDINGLTQKKAAEFLDMPETTLASYEQGHRTPSVGRAKKMAVRMNDISKKKRVKWTYFFEDKVHNTSK complement(596264..596578) prophage Lp1 protein 10; lp_0633 N/A MLTATIHFLDGETLTLNVHDFVWGIRTAPINDRPKKFSKKNWEKITYDFPNKDEINGPFELNEHIKLGLVPSITKLLNNYTFFFTDDDPGTVFASSKVVKIVSH complement(596616..596852) prophage Lp1 protein 11; lp_0634 N/A MKTDGEFVSEHLMELITQQNLTINRVATLAGLNQSTVNAMFEGRSKRPTITTIRKVCGTLGISVHDFFDFPPYNEVEK 596999..597199 PHAGE_Thermo_THSA_485A: transcriptional regulator, XRE family; lp_0635; phage(gi397912660) 2e-06 MTYTLRIRELRQKLGLSQSALADKSGVPQTTISAIESGTNLTYETAKKLARALGVSTDELSVEVTE 597358..597540 prophage Lp1 protein 13; lp_0636 N/A MQAIKNHKRELVDSIIELLPAVSPSLINAKTFWMSEGELQELIGMIHDGDRNEFYEMINS 597601..598155 PHAGE_Lactob_phig1e: hypothetical protein phig1ep61; lp_0637; phage(gi23455781) 2e-101 MSTQSSSVFAGSTLTDVMNHNSVAPIELSGKVGYSVTLIYKQRHDQARIRIESVPAFLAALPNQNQFFAIELAHRFVGVTTPVIDGDRIMKEPLAMAVKTMPELSQALAAIQDSLDELTIPKEDLKPNDFDDPKKLVAECFDAVLYLLNLIAYVCRGFDLSMQDQLKQRMKKWFKDGVVKHRKE 598161..598445 prophage Lp1 protein 15; lp_0638 N/A MMISMQNDAEFIDAVAVAVADRIMPQLEVLVKEYYTPDQGLNQQQAASMLGCSVDTLKDFYYYQPGFPHFKKGTKDSFSQKALEKWMADNQIRA 598766..599203 prophage Lp1 protein 17; lp_0640 N/A MYSETVTKTTFSTEVGEMIPAQAGLNEHWQQRNDSRDWVLDADNYCYDGDEFDKAQLFQDYIDNNDFEQWATDMQADMLSAICIVTFGSTDVSVLYPDQGEEPNWQWLIDVFGQSRLWDELLVHIDTDTMMTRLGYHWVSEGEEA 599200..600087 PHAGE_Lactob_LF1: RecT protein; lp_0641; phage(gi418489428) 7e-68 MSNELVTMVNNNIEDMKNNEGLSLPPDYSVGNALNSAYLILSDTSKGQPLLDKCDQGSVIKALMNMAIQGLSPAKNQCYFIPYGNQLVMQRSYFGSISVVKRLSNVKDIQAQVVHKDDTFKIGGKDGVLVVKEFEPSFENLDKPIIGAFAWIEDINGNRTYTVMTKKDIDISWSHAKTKKVQNEFPEEMAKRTVINRAAKFYINSSSDNDLFVKAVNETTSNEYENDERKDVTPAKRSLVADVAENKAEKVESAEPAKEPVRTAVKEASSNDQEPVKGEVDQQNLFDNLGDFDAS 600011..600871 PHAGE_Lactob_LF1: hypothetical protein; lp_0642; phage(gi418489429) 5e-63 MIKNLSKAKSTSKTSSTTSETLTPANYYDRWTDQSFMSATWFKKFLACEAEALAELTGKWQPVRDAKALVVGNWLHSYFESKQAHEKFKDEHPESISKRGPTKGQLKSDFKVANAMIQSLTNDHDFNLLYQGDKEVIVTGEIGGYPWKGKIDCLNLKQGYFVDLKTTADIYKVYWNPETREKESFVYAYNYPLQMAVYQELIKQQFGVTCKPYIVAVSKQDPPDKQAIDLPEYRLTNAMNQVLESQQHLQDIIKGEADPIQCGHCAYCRSTKKLESVVSADDLLID 600953..601885 PHAGE_Entero_phiFL1A: recombinase; lp_0643; phage(gi281416341) 6e-50 MARPVKEGLDYFPLDVDFAVNDKTEAIMGEFGPKGVLFMIYLLSAVYQNGYYLQWNKLKQMQLANRIEGVSPELANQIVNRLIAYGTFSEELFNSAKVLTSQRIQETYEDATKRRKSQKPTKYWINADINKDTSVVNVDINTQSKVNKSKSNKSKVNNYDDDAGVTREQVINDWTNLWGFPNGIARPEIDEWLEEFKPEVIAYAIWVAGEHQIGSNACLKYVRAIVAGWKKRNITTLEQAKKAAANHDDRMKSERKPSGYSKPRRKEVTPKWMQNGASQADSKPSSSDNEQDDMSDEAFLAFMNSQEEAK 601882..602169 prophage Lp1 protein 21; lp_0644 N/A MNWGNQLVKLAANHAYEPAALHWTKQRMKRHLKTGGSAQDEVCAHEYKLFALEVLIIEYQRDGLNFDLNQCWGKPAEYFIDLEQARQGLQTGVSA 602166..602696 PHAGE_Mycoba_LeBron: gp117; lp_0645; phage(gi304361052) 1e-07 MIDDISTAFKWNQKDALFAEQILAYEGTPAAIKYFSAHSSELSDYGYWFFLSTLWVSYTEYSDLKIWKTLFASQRPNKAIGIMKPSELKAFDNLPNKLTLYRAHRPNESDWIAYTLDTTVAKHFAKEHKVNQISVYRVKKNHVLALFLRRSEQEIIVLDKSLVKLKKIIPLSEVSA 602693..603226 PHAGE_Lactob_phig1e: hypothetical protein phig1ep52; lp_0646; phage(gi23455787) 6e-38 MTETQVLVINADLPDIDHPLAIGPEPEMFKLAQHNYKSGEWPFPVRLVKPGTNVRSDEAYLASMKQDPKQGEREDIKAIRQAHKHGKHSLRQISESTAIEFKRVKDLVHKYSLPLTNDYWRAEKYNNPDEVIAYQTLARLCEKIDAPEFSIRQASMSNGVVNGYYISWVPGLKNKHD 603219..603638 PHAGE_Lister_B054: gp57; lp_0647; phage(gi157325341) 9e-26 MIKHTFMLTPVQQQRPRATHYGRSIRLYDPKAVKQFKQAIAEEAMLTYRHQPLSGSLAVALVFYRPVQQSLSKVEKQRRIDGKHLPVVKPDLDNYIKSFLDALHSIYWQDDALITDIVASKRYGRQPRIEIEVKEIEQG 603635..603865 PHAGE_Lactob_phig1e: hypothetical protein phig1ep50; lp_0648; phage(gi23455788) 7e-26 MTSLSMVLGKEAVVAYMVVLTFQGEITKNYPKIYKRYGDAFKRCEHLNHVIKSDDYRWKLMCAKGWYDVDPNDKGD 603868..603999 PHAGE_Lactob_phig1e: hypothetical protein phig1ep49; lp_0649; phage(gi23455789) 2e-17 MDAEIPAWAIQAACEAMGYADESEVAWEGYPLVMAMVESMEGE 603996..604367 prophage Lp1 protein 27; lp_0650 N/A MMKIVGKLYCIDGNVHSPRDQTLYVVGTNEVDKEQVREACIAYIDDYFGKEYFEKERGTSLKDLVESADLSISYERHIPINEASFDYDIWGSGMYTVGNASGRGARKVWVLSFNDDPFGTEGE 604367..604474 prophage Lp1 protein 28; lp_0651 N/A MTIKDLLADWVAWTIICFMVVGGIKLLVIVLGWLF 604488..604670 prophage Lp1 protein 29; lp_0652 N/A MSDELRWHITIVREIEGLEVQTEFDTPFELKHLLKTMSDYIGDDKPKMVSIKVIGDGDDD 604663..605010 PHAGE_Lactob_phig1e: possible sensor protein; lp_0653; phage(gi23455793) 3e-59 MIKFRVWDNECKVIRDYDELKGLTLDALDASDFKLEQFTGLKDVNGKDIYEGDVLKTKAGLIQIVEQGILETDREDIINGFYANNLSDEKPHTFSYDDEVIGNVHENPELLEADK 605007..605447 PHAGE_Lactob_LP65: hypothetical protein LP65_gp009; lp_0654; phage(gi56693057) 5e-16 MIKVYLKQPVYVERIDELGTGLIDKYEIYSLSGGMWHPHDEVGHSMLCSGHLEWGDWIATGANGSHWIIPNALYEQQYGELPVIPKAVADYMKDCKNPTNSAFHSTLYEAFDELFAASQDVEHWIEHNSDVFARAWLDGYQVEEDK 605444..605611 PHAGE_Lactob_Sha1: LP1-like protein; lp_0655; phage(gi418489797) 7e-16 MSDTEYAKAIRMKATVANLEMNAALTTEQQAQIGQDFIADIMELSDHESKQKAAY 605739..606200 PHAGE_Lactob_phig1e: hypothetical protein phig1ep41; lp_0656; phage(gi23455797) 2e-22 MMGEQQVISDEIFPPIDQEKTIKQVRRFLDKKLPQAVRASGHSVADLKSPSMDGIPKSAPAGNSAEDRITRRLYAEQIVRQTIQAMARCDHECQEILDRLYLQGYSDTMCYMDIGYSKTQYFDRWKPLAMLQFAQSYYLEDLNIYQNRTQTGL 606324..606396 tRNA N/A GTGGCCTTAGCTCAGTTGGTAGAGCACCTGACTGTTAATCAGGTTGTCGCTGGTTCGAGTCCAGCAGGCTACG 606572..607354 prophage Lp1 protein 35; lp_0658 N/A MGIVRSISFFGIVCITYLLSLFANLNSPDWDGWLGFFGSIFGSIIAILGVYWQVSVQAKKAKEDAKQQQDLLRKQLNNEKENQYRQARPFFIVSKELIDPQERNKESISCIYSTFYRSEVPCSILGLTHIVINNVSKRDMYAVKVLVSTSTDDNFKQEFQKYSSAAALKSDEFYKSCISIDKIAANEKVGLLFDHYNEIEQVWIWYITEMRESIKLYFENENGGLIYRPDEKRLENQQKDGSANYDLSDFEETNRLSDEY 607422..607724 prophage Lp1 protein 36; lp_0659 N/A MSCHDQFTANTGMSHPNGCKLMPGWIGGTWIRSVVQISMALLVWIKIRRCSMELPANVPKSDELIECLRMERVIDDALHEANKRRAAYYDQKIMDELLKW 607764..608360 PHAGE_Lactob_phig1e: putative terminase small subunit; lp_0660; phage(gi23455798) 3e-19 MTRKLTPKQRKFANEFIKTNNAYQSAINAGYAKGTARNATKQLLENTGIHEYIIKKTGNVEKRESEEADEVLKNIYRISAGKEIERHYVKIDNLAKEVAGGDDSIEARMEYMTDETTITPASTKEQVAAAELWFKLSGRLKNDSKDVEDQKIRKLKADADIAEAKAKQISNTDETVRIVFNDNLTPDREDIQGNENQS 608344..609630 PHAGE_Staphy_IPLA88: putative terminase large subunit; lp_0661; phage(gi215401206) 2e-112 MKIKVNLAKTIGHGYTDFWRDHHFYRVIKGSRGSKKSVTTAHNLIYRLVKYHWSNILVVRRNANTNKTSTFVECKKAINDFHLERYFKYNESLPEITYLPTGQKIVFRGLDDPLKLTSVNVPTGELCWLWVEEAYEIESFSKLQTVIESLRGNDPQVFYQVTLTFNPWNEHHWLKREFFDQPRDDTFVRTTTVRCNEFVSDEYKQRLYSLYQTNPRRAKTVVDGEWGVAEGLVFEDNIEQIEFNAMDKIQECGQTGFGLDYGFSNDPNAFVAVAVDVRNKQLWVYNEMYTYHQTTPHIAEWLKVNGYERARIYADSANSERTAQLNDLGITNADSVVKTPVEAGIDQLWQYQIHVHPKCKNLWRELNSYVFDSDRMGNTLSKPKDQDNHAIDALRYAVRQYMGDYDGSLGVKWDEQYAIGRQMGVSDY 609620..611278 PHAGE_Entero_phiFL2A: portal protein; lp_0662; phage(gi281416526) 2e-69 MIINSIYGKRRFDREANRDYTMPVGTYTAVAEQPLELMKIVPQFINHHQNHQVSRLQTLYDYYQANNAIKKQVDSNNPYHANNRVAAAFARYMTSIRVGYLIGNPIQLKLQDDTEVDDSQAEKFQDVLNDFTSHSNADYVNQQLAKDLSITGRAYDLVYVKNGVTDLGLVRVDPEQAFVIYDDTVDHKPLVGVRYYQTGILDNQLVEHYEVYTDSQLFTFHSEGGLPQTNSPVANAVLDDTLPHFFDTVPLTEYRNNDERLGDWEPELDQLDALDKSVSMMADFQEDFNNANIVLTGKFSNMTEPKYLLDENGNKKIGQDGQPIIIEPAHPNVDPKNHMWYLEPFAASGGVGSTAKHIIQPDAKYLTKQYDAAGWSTYTNFLINEIHKYTNTPNVNDPNFASNASGVAMSYKLWGSDQERKLQETLFKRGLHARLNACVNYWQTLNQISADNWNTMIKANFMPNLPKNDDATAQLITLLNGTGKFSDETIRDMAEPITGINADTEAERIKEDAQAAQEGDSNYAQGDGGLGKIFATGEKTPVPNQNSKGADN 611278..612222 PHAGE_Strept_1: minor head protein; lp_0663; phage(gi39653715) 7e-10 MDINKLAHALAKILDVKDPVFQQLFALIESSHHSQVKNLTYFLRENVDWNANASEADIKDLTDAVLDLKQNANREEEQVLATLLNNLPYKTNLDVAQAQARVNIANMGLKVNKLVQSKQVDIVQQVTKLTGSGLGGYNTQLRRRALYRVTAQNEPENTSLDLIFKHANKLAIDLDNIIKFQMQNHVNPNSISKIVAKELGVAGKPNPNEDLWETAMQKRYMSTKADMERILVTESKATQTRECAKQYSNLGFTKLKIVTRDNPHVCKYCEGHDGTIVEIKDAVVGMNVPPLHPRCHCNVIPVQMDYKDVLSELN 612330..612977 PHAGE_Staphy_187: ORF021; lp_0664; phage(gi66395236) 9e-13 MNKEPNNPETNPDGGKPSDEPVTFTDEQQAKIDELIGQQHAKWSKKLDQQQADFKKQLADVQKQAEERAKMTAEQKAEADRKQREADMAKHDQELATQIQEYKTKSMLLDKGISPDMLPLVMGADEETTNDNLGLLQKYVDDQVQAATEKLLTGKQAVTAGDNHTSPLETGTDNPWSEDGWNLTKQTEIYNTDKEQAQKLIASAQPISQSFYVGK 612991..614061 PHAGE_Entero_phiFL3A: coat protein; lp_0665; phage(gi281416261) 6e-48 MVNGNITQLSDMQIPENWGAYLAEKSTQNNAFFTSGVVQNVPQIAALLGAGKVANMPLFKPLADDDPQVPDDTTDLLVNKITTDLAQARKLGFDQAWSATDLSAELSGADPLSAIGDQVSDYWSHVYEKLLLQTLTGVFSSTSMKGVNQLDTTTDKTDTTFSLKNFNKARFLLGDRYKDLAIVAVHSDILRQLQDANLVDAKNNSTFVLNGNSNVPTAIQTPDAGDKIKGVQIVVDDSLPVDNGKYTSYLFAQGAVGYSELPVTNAVETNRDPLKNHGIDYLVNRRRFVFAPQGLSWNESNFVTKNPGKTYPSMTDLADGTNWSKVYDHKLIPMAQFVTSADAIVPSTTADPQTGK 614076..614441 PHAGE_Lactoc_ul36: hypothetical protein ul36_44; lp_0666; phage(gi21716115) 5e-09 MSDTQDSSKTLKNVITLLGIAPTDSEKERLTLYIDHAEQAIVLYLGRSVRISELPSGLDYIVENLAVTKFNKFHNEGEKSHSEEGLSFQFNVNDLAPYYPDLQAWIDGQSNTTRGATAIGW 614446..614769 prophage Lp1 protein 44; lp_0667 N/A MRYPDKVYLLTKLPDDDPNGLNHQVSYQSQVVPANMQQVNLTFAPNGTVYNATVIRVYGRYQADAIGLDGEYVEGVNDTVHEIQKVSQHDKQTAFYIIHNEVILHGE 614759..615313 prophage Lp1 protein 45; lp_0668 N/A MANNYDKIPAVKFSIDVDYFNQLFETARRLAHNGMPEAIEEANKEYQRAVALSKAFIKNAGAREKEAAQGLERTQVGHGKSGYEPTGTLQGSLEIKISDDGKSVSVMPMATVADQKRALAAIAGSGSKKPITSQDGVDYYGVYVEYGTYKMAAEPFMKPTGEKIATRLENDFDRIMRLAVLGSE 615314..615700 prophage Lp1 protein 46; lp_0669 N/A MSPEEDLLLSVKQCLRALNVPVYDFGQQRPTQFPQVVVSLQNEQEQTDIKVMDYFLGTVAVDVYTDVANVGQAYALGRQVINAMQRLELTEWPARYDSSTMRKLSDNSLESRPLTRLAYLFDIFVYGK 615712..616299 prophage Lp1 protein 47; lp_0670 N/A MAGVKLQTKNADKILYGIKFPWDDKAAQIQMLGLQATSSTTNTRASSAIKLKQGVVHTSGSRTETFVVDSYWIIGDKIHEGLKKVVEKDVAVGIWRMDFNEAKLDANGNVKSVPAEFGMAKPNGLPETEAVNNLLHANITYNIDGNTQDGVLDVSEIDPQLLVDGLKMFDFAHNTDIGTSSKIDNDNSIKPQFGK 616317..616829 PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp53; lp_0671; phage(gi122891837) 6e-05 MENLMIDGTTCTPKLNYAFANQVKKELSADGRDGFDVLVDGLLDEDPEQIVNAYYYALAYFKRSQPSRDKVVEALEDTIFADDDKTNAAYSDIIQSLHADNFLARKLTSFVKGYNKILDIMQKKLDSEKEGSDQYNKDQLGMEQLQTQLDKLNKVLQPGTPQLVTPEVPA 616898..617134 prophage Lp1 protein 49; lp_0672 N/A MLNQQREQMHARLMPQATYGVELNQPLDEVVERSDEQITNEINKLTDFRTVEERQPDTPQMTMYRKLMEAKADREEAD 617134..621138 PHAGE_Lactob_Sha1: minor tail protein; lp_0673; phage(gi418489814) 2e-87 MSAVVEKTFVWKFMDQISQGVANARQAMGEAVRAATSMGSKVSESGEQWRNYASKQKEAMDEAKANFNEYKDQVTNSSNSIREKINGLIDHLKEIPHDVMTTLKSKINDENIGLFSRKVRDVPKERSVFLRAKDKFTNMFKHLSERIKQIPKEHSLLLKVKDGFSKGFQKFNESAKKTRENGHRLRDIIEGTFIGNALYGAYDKVKDGIIEATKAGYDFDKEQQVMLQTWTTLTGSANQAKGMVSTINDLSKKTGQASSLVNELEQGFYHLHSSKSEADDLSKAMLNMGDAVGLTGDQMKSVTQDMVHGLATGKVSAGELNQIGAYFPMIDEALAKHEHTTVAGMRNMARQGKITGKDLESVFTELGNHKYGEAADNMLQTMTGMQRTVKAQMPKLLGEIEEPLLKAQNPIFGTISKWVSESHTENLFKDLGNKVNKGFATVTKAFAGDNFTGKGFTNSLDQMIENAGKSVNKLSAWLAKNAGNIKEFGSIVKSSLTIAFKVMGAAINDVVSVLGFVVNPLGRVSNHSKDASKSVGGLANGLKSLSSNGPAIQTFGKILAGAFVLKNVSKFIGGIKSINDNLKITTGLKNLGKPVTEFATSLKSGSGVLSSFGAALKAVPFTIWIIAIAAIVLALVELYKHNKKFREFVNGLVDTIKVWYKDATKWLGNAVAWIKKTFGPFFKSAVKSIQSVWKEIEPVVSAGIKMVQKVLKLGMAVVSALWKVAWGYLSLEVKETWAIIKPIIDIGMAVIKGLISAGMDIIKAVWKAAWKVISTVVRSVWNVIKPLIIGAMNVISDVIQTILDIIHGNWSKVWGDIKNIFSDIWKAISQAIKAYMSGMHDIISSVLDTISTVWHGMWQGLGDFFKNIWKGIKQAAQDGINGVLSVINAGVDAIDSVWKFFTGHKTSIRHLDPVKFAQGGVVHTRLSMVNDGAGQNWKELLQLPSGELKMTHQRNAVLPLPVGTRVYNGDETASIMTSAGVDHYANGGIVGDAINWTKGKLSDIGSWIGDKAEAVEKFLKDPLGNISKLLHKATDGLFKRAASFGDLASGTISKLSSIAVDKFKEMLNSNKKSLEVSDGKAGHYNPGLIEKATKMMHIDSLPAGFSELLQATIMSESGGKSVIQTIHDGNSGGNEAGGILQFTPGTFAAFAMPGRTNRMNPLDELLAFFNNSDWRNSIGHTVIWGVPKVDWLHSGPQGHRRFAHGGEVFDEQTVIVGDNSQHHEFVINPYDVTAYPLLAKAMDTTMRAQPIADVNTNIDHRDSSETNSLLRKLLKVITDDQQSTEDDSLTNMLSRILVALKQDRPVYLNANGRLIDITNEQLGERMEDERRYRW 621132..621869 PHAGE_Strept_5093: hypothetical protein st5093phage_28; lp_0674; phage(gi238801908) 1e-37 MVMDHDIYFGYQRPRPTEYVQFANFDSRQLNLYLAGRIANNPPTKEVTESIGYMDGIIDFSDILGRRIFDNRTIEYQFKALNINYHDRKLLEQKCKRLLLIPMRQPIYDSHDLPFYWFGKASSVTANDDHVNNVLEITVQFNVSPYALRKGQFDDIWDNFSLETGYAQFTKYSVKGTKKISLYNDSDLKSRLKVICQNDMTINGKYKYTKNYQDNPNFRLEPGINDLTVNGNGDIEFQWESEVML 621869..623743 PHAGE_Clostr_phi8074_B1: putative phage tail protein; lp_0675; phage(gi431810378) 9e-27 MYKILVRETYRGNEEAINEPDVYGNRIVSGSLSLVSGGIDTGTLAISLENTLFNRILPYRWFIRIEDLQTKETIFRGRFIKVSKVYSTTHTQTLSFESELAYLHDSAQVYREIHNTSVNDFLQIIIDEHNRQVDDFKKITLGTIDVINSTDNVYRYLDETKDTLDNITDKLVNRLGGFLRIGRNPHSQLILDYVNRLGTDTKQTIELGVNLKSFTRDLNVNNLITRLVPLGAEKAQKDDQRDSNKPIPKIDISSVNNGSRYLDDPKLIDKFGIIQKVNVWDDVHDARILKTKGEQYLKEQVSAEIAWSVDIVNLALIDKRFQSFAVGNSYRIIDKFMDIDETISVSEKEVDLVNPQTVTIKIGNQNKKLTSQQINQIRIINQLKKFSEYITSFNTQNNVPDSPNGSQPNQPHDKPHDQPHDQPSYYNGAIVDVSEFQSDINWSQVRNAGLALGVIRIQDGENYIDVKHVKNLQGVLANNLNYAVYAFFRGVNEADSQAEARAFYQRVQNVVKGQQQPRFYALDIEAIENNNMRGTVNAYISQLNDLGILNSQIVLYIANHLYQQLNLDTTKVGSIWIPSYGTKPRYPYDLWQYTDKGTLAGIPTKVDMSQDPSTRFKNQYLTRR 623748..624740 PHAGE_Staphy_vB_SepiS_phiIPLA5: virion associated hydrolase; lp_0676; phage(gi399528912) 2e-40 MSNTDKYYRDRSHITGKLDLQKLPKAIREKQYGIDVREAMAQTAEAIAGVQSTAQKFNQDTKNQVNQLDEKYTREIRAIVLGDTTSVATPPIQEPNSEASNPLSNLYETARGQVLYDFVKQSSLTKVSKIGVIGDSVAATAGGFPDILAHQYNIYVENLSVGGAKMSDYNHDAIVNQASRLQQCDVVIIQGTDDDWVHDISLGYAGDTNIKTYLGGLRETIKRVKNNNPKAKLIVVNCTRQCVDVHGKYRTEQSKNTFGLTLIDYMEAQKKYLNQQDVPYVDLMKPTSIFEPDNPAFKKTMMHDGLHPTPEAHQYIVQEIAKDYSYYYDK 624755..625369 PHAGE_Lactob_phig1e: minor capsid protein; lp_0677; phage(gi23455814) 4e-16 MANQELVYDITKQPNLQPAQQAIYARVGDGGLKTVTVKLNANNYPYDLTGKHVNFEGVKADSTRIIDTSGGIVLDPQGGIFRYVFPAQTFTARGRFQQAFFKVMLGDKVDTTIDVVVDVSPNLVEFGINSESYLSEYEQLISELKDKQQTFLTDLGQKVDLSKTQLQNISDRLDNIKTQLATNDVVSKTEFNTKLKNVVFIKEG 625375..626115 PHAGE_Staphy_187: ORF006; lp_0678; phage(gi66395221) 1e-08 MSIKELQDVTGTVIHPRTETAAIVDADKLVNTTSTQNNIAGIKNFVDGISIKGVPLLDIDFNKVKLVPNDDVYQIKQAGLYFYTTNTKNVPLLSSRFHDGFVLYGAKDTKTAFLYYIGARVYQERFQGKWLRQESSIPQDLWVGEGKVGDVLKLRDTLDNYRQLRFRCYFTIGNTLQFIPAWASDNMLYLTQPALNFDGTILRALEVALQIGQDQRSLIIKSAKYFANGKSTSITDGFLKEVGGML 626116..626436 prophage Lp1 protein 56; lp_0679 N/A MQVKLDETKHVVSYALVGGLEDAIDYDESQLPADFLTATDSSAYWLIDGVLTKDPNYAPSIQPVVEDQPSNEQQSLTKLAQQVTEQQEHIASLEESLTQLVKGGTH 626436..626612 prophage Lp1 protein 57; lp_0680 N/A MYIIFKFAYQLWHTMTKEEVSLEVIKGGITPVEYQTITGEAYIEMATGDEQDETTLKA 626590..627738 PHAGE_Lactob_phig1e: lysin; lp_0681; phage(gi254733530) 6e-60 MKQPLKHKIILTGAAMMAAFFLGVNANAARMDMVDVSNNNGYMSTAEYVSMRNEFGVRALTVKISEGTTFKDGYAASNIANGQAAGLYVNSYHFAHYKTKAQAIAEADFAGQTAKAAGLPVGAVLATDVESAEEQEILSQATNDRNNAAFMKEIQKFGYRADIYTSGSWANNKMTIKSKTGWVAGYPYVMSGQKWYTNNNAWQWSGSAHFRISYGGFDVSQLYTDYYTAGQKSTVKPTDPDAVKANNNTFKPSTSAKWVKETKTYTLKAAVKLRTGASTSSSVVAILPAGTTVKTDQAIIQGGYRWVRQPRFNGYGYLATGPASNTLEYVNSGVTHMYYTVKPGDSWWSIAQRNGLSMTTLANQNGKTIYTTIYPGQRLVVR 627739..628035 prophage Lp1 protein 59; lp_0682 N/A MHTLLGLGWDEWGSIVAIVTSICVLANWILNKTVRIPLNDLGKRLSRFTDESLKVRQQNADTMNAIENRVIKVEGRLDGHDIEFKHLYEKEAKGNEKD 628022..628381 PHAGE_Staphy_IPLA88: putative holin; lp_0683; phage(gi215401230) 1e-06 MKKISLKNADGSFNGKLIAGIISLLIVLIQQILAVFGIKFAGDWTSIVAVVNTVLTILGMLGVITDVQTVNVSEDATGTLEQATNEVDSTSQADKAPTSASVSNVTDISADVKVDDKTE complement(629228..629434) prophage Lp1 protein 61; lp_0684 N/A MSQFNHLNDIPDKIMNCSKCGKKFSISISDGSMWGGHDSESIQCPWCGANNGKEYGGDMIMVFTSRLK 631770..631783 attR N/A GTTACCCTTAAGTA complement(632146..633123) PHAGE_Strept_3: putative mitogenic factor; lp_0688; phage(gi28876265) 5e-09 MALIGTILLFATLYWFWRLHRRYRGRQWWRHSWPAIIALLVSFSILGTSDESTQPTVKTKTVTKTHLVTANNDKQLTALQAANRASASSLKQAAKKLSSSQQHIDKLKATNKQAGATSTTAPTKVNSDHNPSNTTLASKTYNGQQTITINQNQPAFTAKELSTSQGAWQQYGNLDSLNRVTAANALLNQSLMPKAEREALNVRPTGWHNKRISSGWLYNRSHLIGYQLTGQNNNIKNLMTGTRSLNDPEMTTYENQVAAYLKESPKNYVRYQVTPIFKGNELLARGVQMRGQSVGSNAVSFNVYIFNIQPGMTLNYTDGTSQVSH #### region 2 #### 2156166..2156177 attL N/A TTTTGATTACTT complement(2157270..2159159) PHAGE_Bacill_SPBc2: ABC transporter; lp_2394; phage(gi9630145) 3e-38 MSEKNTSSTKPARPAGGHGPGGHAGLVEKPKSFWKTAIRLMRYMSDRWVGLAVVMIFAIASVIFQIRTPKILGKATTELYKGIMKGAAQQKAGISQSGYPINFEKIGQIIMIVLIMYLASALFNFIQQYIMTRISQRTVYKLRRSFKGKMQKVPISYYDTHSNGDIMSRAVNDMDNIANTLQQNLTQAVTSTVTFVGTLWMMLTISWKLTLIALVTIPLSVVVVGVIAPKSQKFFGTQQKSLGLLNNQVEENYAGHVVIKSFNKEQDAIDDFEIQNNNYYQSAWKAQFISGIIMPLMMFLNNIGYVFVAIIGGIDVANGNVSLGNIQAFLQYTQQFSQPISQMANLLNTIQSTVASAERVFEVLDEEEMKQTKSNLPAEPDSDNLISLQHVQFGYADNDLLMKDYNLDVKRGQQVAIVGPTGAGKTTIINLLERFYDIKGGSIKLKGTDTRDLDREDLRSHFAMVLQDTWLFTGTIFDNLKYGREDASDEEIYAAAKAAHVDSFVRKLPDGYQTVLNEEASNISQGQRQLLTIARAFVANPEILILDEATSSVDTRTEVHIQHAMERLLKNRTSFVVAHRLSTIQGADNIIVMNHGSVVETGTHEQLMAQNGFYADLYNSQFTGNISLD complement(2159159..2160889) PHAGE_Bacill_SPBc2: ABC transporter; lp_2395; phage(gi9630145) 6e-23 MLKIAKGRISYPAVIGAVLFMIVQVIATLNLPSLTSNIVNNGVATGDISYIWKIGFEMIGFSLLSVVAAFGNVFLAARSSQQLGKNLRSDIYKKVINFSNDEFDKVETSSLITRTTNDVVQIQNVAMMALRMMIMAPIMLIGASFLAYTKSHELTWIFVVSIPVLLIFIGLIMAFAIPLFRAMQTKTDRINLVFREGLTGVRVIRAFRQDKFEQDRFEDANQDYTHNAIKVNTIVALAYPVMTLIMSGTNVAIVWFGGQLISSQTMQVGNMIAFMTYAMQVLMSFMMLAMVFAFIPRAAASASRIQEVLSIEPKITDPDKAATLPATTEHSLEFDHVNYRYQSAEQLALADIDFKAHSGQTVAIIGGTGSGKTTLVNLIPRFYDIESGAVKLDGKDVRQLKLADLHQAVSFVPQTATLFTGTIRENMQFGNEHATDDEIWHALEIARSTDFVKEEGGLDAHVEQGGGNFSGGQRQRLAIARALVKQASAYVFDDSFSALDFKTDAQLRAELRQDKQIQQSVVVIVAQRIATVADADLILVLDNGKLVGKGTHAELKANNEVYQEIMKSQLREEDQL complement(2161117..2161509) hypothetical protein; lp_2396 N/A MNKKWAVWLVAIIMMISVGTLLIVPTMTKNQGSELAMAVDNLNPFVKVQTVYGRTNQAIGHSTGQMGEDIYTYRMLTSDAQGKQRWLTFTADHRLKQRHYLKIETKGQNVNSWEAVVTNQVPQNIQEVLA 2161732..2162583 prophage Lp2 protein 59; xylanase/chitin deacetylase (putative); lp_2397 N/A MHMRGINFVLGLGVALGLLAGCQAASPATKQASSQSSKTSAKSVHSSAKHQAQARPYQHWHTVKDVHLPILMYHSISSGNQLRVPAKEFQTEMTYLKAHGYRTLTANEAVYALKHRRIPQKKIVWITLDDSYKDNMTAAWPILKQTHQHATINFITGFTHKKNHLTLADAKRMQASGNIDFQSHTVRHLDLNNLTYQVQLTELSSSKKWLDHNLQQNTQVICYPAGRANQQTIKADKQAGYQYALSTAPGIATSTQNPYNLTRQRVVPGMSLTAFQTLLTSNN complement(2163940..2164317) PHAGE_Staphy_phiMR11: putative holin protein; lp_2399; phage(gi162290172) 1e-06 MKKISFKNADGSLNGKLIAGIISLLIVLIQQVFAMFGIKFTGDWSAIVAVINTVLTILGMLGVVTDVQTVTAPTVKNDEESQVEAAANEVADETPTPTSTVAVVNSSAASDTEMASESASQASQK complement(2164304..2164600) prophage Lp2 protein 57; lp_2400 N/A MHTLLGLGWDEWGSIVAIVASICVLANWILNKTVRVPLNDLGKRLSRFTDESLKVRQQNADTMNAIENRVIKVEGRLDGHDIELKHLYEKEVKQNEEN complement(2164601..2165755) PHAGE_Lactob_phig1e: lysin; lp_2401; phage(gi254733530) 9e-72 MKFKNKLALTGAATMAALFLGLNASAARMDMVDVSNNNGYMSTAEYVSMRNEFGVKAVTVKISEGGTYKDPYAASNIANVQAAGMYINGYHFARYATKSQAIAEADFAGRTAKSAGLPVGAVLATDVESQEANNQSKATNDRNNAAFMQEIQKFGYRADIYTSGSWANNKMTIKGKTGWIAGYPFVPAGKKWYTNNNAWQWSGSAHCRISYGGFDVSQLYTDYYTAGQKSTVKPTNKAAVKANNRKANKHIYRPSASAKWVKESKTYTLKTAVKLRTGASTSSSVITILPAGTTVKTDQAIIQGGYRWVRQPRFNGYAYLATGPASSTLEYVKSGASHTYYTVKSGDSWWAIAQRNGLNMTTLASQNGKTIYTTIYPGQRLAVR complement(2165767..2165886) PHAGE_Lactob_Sha1: endolysin; lp_2402; phage(gi418489821) 3e-10 MNKHKLKALILTVGAIFMAFLMVNVTSQASATVDNNGVQ complement(2165898..2166137) prophage Lp2 protein 54; lp_2403 N/A MSFDLGKFLTEGLIDSVNNGLIPSDLATVYAGNYLVKSLITQAQVIQVSDAIVAYKAAQAEAAKQADSSLATQTEDTVH complement(2166134..2167309) PHAGE_Lactob_Sha1: prophage Lp2 protein 53-like protein; lp_2404; phage(gi418489820) 5e-70 MFSWLKRRNLKMEKTLNFTDTSPQTVKIGDTTTSFTLICGNDNMSVDLTHANSITVKLGNASGYLKSTTIDPTSLIDPTAGQVTVKFDADLMTSLPAGSYAIEVWVVDSTGTSIYPSDGSAGFTITNNIQNTIGETITTITFDDFVKAMNKAAHTIAKGDKGDTGPQGKQGEPGPIGKTGPQGATGPQGAKGDTGTVDNAGLTTAPAFVELKTQVNNSAVGTNLITNSNFSSGLNHWYINPGDKKDCKATATTDSDGDTCIHITGTGNACGLYCSPVSFNQNQITTGSVLAKGTGTLLMVGLEGRQVSTFGTTSTESYSKVSSTMQASSSTNNFVIYFGLVDGIVDAYIKFPKLEIGSHETDWCPNSSEVLTQSDYAKIKAAIVSLGGHLS complement(2167331..2169526) prophage Lp2 protein 52; lp_2405 N/A MNIDDHTLATNELAVLPLNHNWYQKVASNFEILQQYLNVFNGLGYYPNVGIISAGTLTIDLLNKHVDLRAGTMIERIGSAEVKVPTNVGIDLTNLGSVDYLVYDIQTNALMELSAIDKLKSTQILLNAIADQQLVFAYNRHTTKLFNSSEMMAPTNRATVVGDTIYVDWDQSAILIPKTTLIETTDNQFYTAKTDTDTRLDFSEYRNKGVDFMLIYDTLAKKYALSEIANQDYVTTNQGLYNSQLLLCIVNSNGLKLVEHGSNIVMKPFGESKQGNVTILNGTLTIDTNAHTIAFSDDFILGLTQAGRFQSLNHANNLTYQDKATGSAINTLYYHITLTERYFYVDVYPHNVDDFRILTFWNGKVFGIDDLDRVIVNGVGNGGRAALINKIDLRQLSTMMYSKEHPTVKIANLGDSTYQITGVSSTNGRWSDLLQPALIAETGNPNIKVVNGGFSGKSIQWIHDNFDTYFGHGKQFDGVQFVILGMGLNNATEFYNLDVIKGITKDVIQKIQALGMSVVLATTQANNLTTLSDRQEWYMYAAENAMRKELAHEMNLQLLDLNDATQKFLQYSHVKNSEITFDGLHFAPRGHQFEADWFESQLLTRPITITDNFQVDSTVQNTKSSAPQDWVVDNPNFTDGFKTKFNTSNNKGDTMLLDTLIMNMNTNPKALIAYTGPQNNGAYAVINGKKYPLSTGKTVLLDYAEMGLYHIKIMSGANNSVDVEGLKFKDA complement(2169516..2169773) prophage Lp2 protein 51; lp_2406 N/A MSIALKNAVKIVTDAVDAINKRFPIKWEDIANKPNIDVTNFYTKEEIGKILNANNQLVSPDGAAWKPTIDNNGVVSWKKVMPNEH complement(2169770..2170951) PHAGE_Lister_A118: gp18; lp_2407; phage(gi16798801) 2e-23 MMIQYPKLTISDRLNQHRERLPLADLQETFKESWTVNEKWQVTFAITDSLAYEQAIKLLDVQNIVHYDGQSYVIIQCTKTVSGGVSVYEVTASHLFYRLANNARQNNVKTGTLTYGLSEAVNFMLDNNDQGLTAKFIGDFPRIKIENLGNSSFNKFLQDYTSKFDASYVIDNQQIIFYSATYLKHQPVIDTLFYQHDVENVKLSLDTTSLANEVRCLGKPIDKSSGNNDSQTKYQVDFTYRDDASIQKWGLQRGDPLSDERFTDQGSMTEYARQTVQAQPIATLTTTAWNVTIKQCETVKLVMPNLDWQTTVALNGYERNPFNQFSLPTITFDNASLAVNDINVAMFKHITNAHNHVGKTMVQLMAALGDIQNGDLITDEDTIDKLNELGGIS complement(2170948..2171844) PHAGE_Lister_B025: gp15; lp_2408; phage(gi157325232) 1e-19 MKVFSERADKPHAYLFGEYTNPLGFDPVELALSEDGQAWQSIFDDPNLSNVYLVDFDWLPPVIADTYRTAGTRDGQQLANSRLDQRDIVLKFIAYCRGDADEKLTFQSLSNFLIRRHNYWVAFDNDGSRMYHVREKTITAEYYGDKMMMITVTLNNFTGVAQSIMPSAHINEMPNIGLGLPTDIVNYVFRTSEFDVNNIGELPVDPLVQGDYFDITLTGIGSPTIANTTTGDAITCTKSLTTGDTFKLIGVNPQINGQAAGINTDNGIIRLASGNNHFKITGCQDLNCTVNFYFKYLN complement(2171854..2175927) PHAGE_Lactob_phiAT3: putative minor tail protein; lp_2409; phage(gi48697271) 1e-94 MSAVVEKTFVWKFMDQISQGVANARQAMDEAVHAAADMGSKVSESGEKWHNYASKQKEAMDEAKANFNEYKDQVTNSSNSIREKISGLIDRLKEIPHDVVTTLKSKINDENIGIFSRKVRDVPKERSVLLRVKDHFTDIFKHFRERIKQTPKKHSLLLKIKDGFSNGFKKFNENAKKTRENGHRLRDIIEGTFVGNALYSAYDKVKDGIVEATKAGYDFDKEQQVMLQTWTTLTGSASQAKGMVSTINDLSKKTGQASDLVNELEQGFYHLHSSKPEADELSKAMLNMGDAVGLTGDQMKSVTQDMVHGLATGKVSAGELNQIGAYFPMIDEALAKHEHTTVAGMRNMARQGKITGKDMESVFTELGNHKYGKAADNMLKTMTGMQRTVKAQMPKLLGDIEQPLLKAQNPIFGTISKWVSETHTENLFKDLGNKVSKGFATVTKAFTGGNFTGKGFTNTLNKMVENAGKSVDKFSAWLAKNAGNIKAFGSIVKSSLTIAFKVVGAVISDVVSVLGFLANPLGKVSNNSKTASRSVGSLASGLKTLANNKGAIKAIAAALTTFFIAKKILTTVMALKNMNDVLHLTTIAGRMVSAAFTPWLLIPAIIIAIGVGLYELYKHNKKFRDFVNGIWKAVTSTFGKIGKFISNTFKGAGKWFSGLIKGAQKALNTVKKFFTGKLGWEKAIGKEIGNIIKTVSKGFRQVLKTIGNILKGFGKVLMYAFLFPVGLAALILKPFIKPFTNLIKATIKTVKNLWSKLVDFLRTVFTPVINVWKVVWKAISTFFHIVWEGIYSIVKVIFKAISNFIHLELKGISIIWHIVWHAISSFFGTIWRGMKAFLLPIVEAIWNAIKDALDLIKRIWHSIWNSISSFFSNIWDRISQIAKTATHWLSSHISDVLDSISNVWHSMWQGLSDFFGDVWKGIKKAAQDGINGVLSVINAGVDAIDSVWKFFTGHKTSIHHLEPVKFAQGGVVHTRLSMVNDGAGQNWKELLQLPSGELKMTHQRNAVLPLPAGTRVYNGDETAAIMASAGVDHYAHGGIVGNAINWTKGKLSDIGSWIGDKAKAVDKFLKDPLGNISNLLHKATDGLFKGAASFGELASGAIGKLSSIAVNKFKEMLNSTKKKLEVTDGKAGHYNPGLIDKAARMMGIDSLPAGFSELLQATIMSESGGKSVIQTLHDVNSGGNEAGGILQYTPGTFAAFAMPGHTNRMNPLDELLAFFNNSDWRNSIGHTSIWGVPKVDWLHSGPQGSRRFAHGGEVFDEQTTIIGDNSQHHEFVINPYDVTAYPLLAKAMDTTMRAQPVSTQTNNNHENDNETNSLLRQANALLQIIADKKPELLDDLAAKLRQKDAQTFRMQNS complement(2175927..2176211) prophage Lp2 protein 47; lp_2410 N/A MTPAEFKAVWHGYQVNMLNQQREQMHARLMPQATYGVELSQPLGEVVERSDEQIANEISKLTDYRTVEERQPDTPQMAMYRRLMEAKADRGEAN complement(2176256..2176744) PHAGE_Staphy_vB_SepiS_phiIPLA5: tail protein; lp_2411; phage(gi399528908) 4e-05 MENLIIDGTTCTPKLNYAFANQVKKELSENGRDGFDVLVDGLLDEDPDQIVNAYYYALAYFKRSQPSRDKVVEALEDTIFADDDKTNAAYSDIIQSLHADNFLARKLTSFVKGYNKIMDIMQKKLESEKEGSDQYNQDQLGMEQLQAQLDKLKKVLQPGTPQ complement(2176778..2177344) prophage Lp2 protein 45; lp_2412 N/A MAGLKLQTKSADKILYGIKFPWDDKATLIQMLGLQAATSTTNTRASSAVNLKQGVLHTSGSRSQTFVVDSYWTIGDKIHDGLKKAVQQDVAVGIWRMDFNEATLDTAGKVKTVPAEFGMAKPNGLPETEAVNNLLHANITYNIDGNTQDGVLDVAELDPQLLADGLKMFDFAHNTDVGSASVSSGLGH complement(2177356..2177742) prophage Lp2 protein 44; lp_2413 N/A MSPEEDLLLNVKKCLRAFNVPVYDFGQQRPTKFPQVVVSLQNEQEQTDIKVLDYFLATVAVDVYADVANVGQAYALGRKVANAMQRLELTEWPSKYDSSSMHKLIDNSLEGRPLTRLAYLFDIFVYGK complement(2177744..2178298) prophage Lp2 protein 43; lp_2414 N/A MANNYDKIPVVTFSIDVDYFNQLFETARGLARNGMPEAMEEANKEYRRAVALSKAFIKNAGAREQEAAQGLERTQVGHGKSGYVPTGTLQGSLEIKISDDGKSVSIMPMATVADQKRALAAIAGSGSKKPITSQDGVDYYGVYVEYGTYKMAAEPFMKPTGEKVAMRLNNEFERIMRLAVLGSD complement(2178288..2178626) prophage Lp2 protein 42; lp_2415 N/A MAGDSMRYSDKVYLLTKLLDDDPDSLNHQVRYRSQVVPANVQQVNLTFAPNGTVYNATVIRVYGRYQADAIGLNGEYVEGDNDTVHEIQKVSQHDKRTAFYIIRNEVILHGE complement(2178616..2178981) PHAGE_Entero_phiFL1A: hypothetical protein; lp_2416; phage(gi281416369) 2e-07 MSGVQDSGKTLENVITLLGITPTDNERKRLTLYIDHAEQAIVLYLGRSVRISGLPEGLDYIVENLAVTKFNKFHNEGEKSHSEEGLSFQFNVNDLAPYYPDLQAWVDGQAKTTRSATAIGW 2178988..2178999 attL N/A CCTCCTGACTAG complement(2178996..2180054) PHAGE_Entero_phiFL3A: coat protein; lp_2417; phage(gi281416261) 2e-51 MVNGNITQLSDMKIPEHWGAYLAEKSTQNNAFFTSGVVQSVPQIAALLGAGKVANMPLFKPLADNDPQVPDDTTDLLVNKITTDLAQARKLGFDQAWSATDLSAELSGADPLSAIGDQVSDYWSHIYEKLLLKTLTGVFSSASMKGVNQLDATADKTDTTFSLKNFNKARFLLGDRYKDLAIVAVHSDVLRQLQDANLVDAKNNSTFVLNGNSNVPTSIQAPDAGDKIKGVQIVVDDSLPVSGGKYTSYLFAQGAVGYSELPVINAVETNRDPLKNHGVDYLVNRRRFVFAPQGLSWNESNFTSKHSGKAYPTMDDLADGTNWTKVYDQKLIPMAQFVTSADPIVPGSGLGH complement(2180071..2180718) PHAGE_Staphy_187: ORF021; lp_2418; phage(gi66395236) 3e-12 MSEEPKNPETNPEGGQQSDEPVTFTDEQQAKIDELIGQQHAKWSKKLDRQQADFKQQLVVAQKQAEERAKMTADQKAEADRKQHEADMAKKNQELATQIQEYKTKSMLLDKGISPDMLPLVMGADEDSTSDNLGLLQKYVDDQVQAATEKLLAGKQAVTTGSNNTSSQEAGTNNPWSKDGWNLTKQTEIYNTDKEQAQKLIASAQPISQSFYVGK complement(2180825..2181769) PHAGE_Entero_phiFL2A: phage head protein; lp_2419; phage(gi281416528) 1e-08 MDINKLAHALAKILDVKDPVFQQLINIIEHSHHAQVKNLTYFLHKNVTWQDDADAADIKELTDTVLELKQSANREEEQVLATLLNNLPYKTNLDVAQAQARVNIANMGLKVNKLVQAKQADIVQQVTKLTGSGLGGYNKQLRHRALYRVAAQNEPENTSLDLIFKHANNLAIDLDNIIKFQMQNHVNPNSISKIVAKELGVAGKPNPNEDLWETAMQKRYMSTKADMERILVTESKATQTRECAKQYSNLGFTKLKIVTRDNPHVCRYCEGHDGTIVEIKDAVVGMNVPPFHPRCHCNVIPVQTDYKDVLSELD complement(2181772..2183424) PHAGE_Entero_phiFL2A: portal protein; lp_2420; phage(gi281416526) 2e-67 MIINNIYGKQRFDREANRDYTMPVGTYTAVSEQPLELMKIVYQFINHHQNHQVSRLQTLYDYYQANNAIKKQGDSDNPYHANNRVAAAFARYMTSIRVGYLIGNPIQLKLQDDTGVDDSHAQKFQNVLDTFITNTNADYVNQQLAKDLSITGRAYDLVYVKNGVTDLGLVRVDPEQAFVIYDDTVDHKPLIGVRYYQTGILDNQLVEHYEVYTDSRLFTFHSQGGLPQTNSPVANAVLDDTLPHFFGIVPLTEYRNNDERLGDWEPELDQLDALDKSVSMMADFQEDFNNANIVLTGKFSNMTEPKYLLDENGTKKIGQDGQPIIIEPAHPNVDPKNHMWYLEPFAASGGVGSTAKHIIQPDAKYLTKQYDAAGWSTYTNFLINEIHKYTNTPNVNDPNFASNASGVAMSYKLWGSDQERKLQETLFKRGLHARLNACVNYWQTLNQISPDKWNTMIKANFMPNLPKNDDATAQLITLLNGTGKFSDETIRDMAEPITGINADTEAERIKKGIHDAKEDEDNYAQGGGGLGNIFATGEKASLPDNNNKEG complement(2183414..2184115) PHAGE_Staphy_IPLA88: putative terminase large subunit; lp_2421; phage(gi215401206) 6e-40 MSSSLTNISSDSIGLYQTNPRRAKTVVDGDWGVAEGLVFEDNIEQIEFNTMDKIQECGQTGFGLDYGFGNDPNAFVAVAVDVRNKQLWVYDEMYTYHQTTPHVAEWLKANGYERARIYADSANPERTAQLNDLGIVNADSVVKTPIEAGIDQLWQYQIHVHPKCKNLWRELNSYVFDSDRMGNTLSKPKDQDNHAIDALRYAVRQYMGDYDGSLGVKWDEQYAIGRQMGVNDY complement(2184054..2184713) PHAGE_Staphy_phiMR25: putative terminase, large subunit; lp_2422; phage(gi189427164) 5e-68 MSTTQQFNLSLRQLIGSGYTDFWRDHHFYRVIKGSRGSKKSVTTAHNLIYRLVKYHWSNILVVRRNANTNKTSTFVECKNAINDFHLERYFKYNESLPEITYLPTGQKIIFRGLDDPLKLTSVNVLTGELCWLWVEEAYEIESFSKLQTVIESLRGNDPQVFYQVTLTFNPWNEHHWLKREFFDQKRDDAFVRTTTVRCNEFVSDEYKQRLYRFIPNQP complement(2184918..2185427) PHAGE_Lactob_phig1e: putative terminase small subunit; lp_2423; phage(gi23455798) 1e-51 MKRKLTPKQQKFADEYIKSGNATQSAILAGYKKRSARSVGQENLTKPDIKKYIDEQMAEIESSKIADAKEVMEFYTRVLRGEELETVVVGTADGAESIERPPTTKDKTAVAKEILKRYPGNDKLVEQQIRKLKAEADIAEAKAKRSSKDNQQVVINFTDDLPDDGQQNA complement(2185625..2185888) PHAGE_Acinet_133: hypothetical protein; lp_2424; phage(gi326536185) 1e-15 MRAQKKPVVIEYEVFQDTVTCFNALQDKLRLDPLRVSYHDPDHPILKIETLEGTMTANIGDYIIKGVRGELYPCKPDIFKQTYDLLD complement(2185857..2186036) PHAGE_Lactob_Sha1: HNH nuclease; lp_2425; phage(gi418489799) 3e-10 MPVMIHSKYGYESPEWVQADARLDKWCKNRKRRAKQHGAFRLDKNKEVQHASTKEASSY complement(2186916..2186987) tRNA N/A GCAGATATGATCTAATTGGCAAGATGGCGGTCTCCAAAACCGTCTATGTTGGTTCAAATCCAGCTATCTGTG complement(2187057..2187129) tRNA N/A GTGGCCTTAGCTCAGTTGGTAGAGCACCTGACTGTTAATCAGGTTGTCGCTGGTTCGAGTCCAGCAGGCTACG complement(2187251..2187712) PHAGE_Lactob_phig1e: hypothetical protein phig1ep41; lp_2426; phage(gi23455797) 1e-22 MMGEQQVISDEIFPPIDQEKTIKQVRRFLDKKLPQAVRASGHSVADLKSPSMDGMPKSASAGNSAEDRITRRLYAEQIVRQTIQAMARCDHECQEILDRLYLQGYSDTMCYMDIGYSKTQYFDRWKPLAMLQFAQSYYLEDLNIYQNRTQTGL complement(2187791..2187991) prophage Lp2 protein 30; lp_2427 N/A MLPIEIIESLAPKLPFELLTDLNQRMMDWKASGGSDTDAYMYQQSRAAENYYRLVLKIDPMAYEDK complement(2188022..2188351) prophage Lp2 protein 29; lp_2428 N/A MNKAFILYRRFGMFYMIGYIFAGLILVIIASFGVVAAIETLREKRDTRPDIITNGNIKIKIDDGPTKYYRVDEVITNLNDKGSNEYQNDIKELVLHQLTDEDVAMKLLA complement(2188385..2188516) prophage Lp2 protein 28; lp_2429 N/A MKQIFEVIWNATPWQLVSWIGSIVLGVVIAFGLILLFLSMYHR complement(2188531..2188842) prophage Lp2 protein 27; lp_2430 N/A MKYEAKMEDVAVKSNYPIDIERVKELVEWSLPSWTKQVIIEGPLADDNWEGGDTVGDLINELKKLPEDMPVECDYAGMSVETVRHQGPDDETLYLYSALVVSD complement(2188915..2189391) PHAGE_Lactob_phig1e: possible sensor protein; lp_2431; phage(gi23455793) 2e-08 MKPIKEVATMIKFRGVPLEDVSEMRCVNFDGDFVYGYYIKNGDGALIVGDKTKELDDVGLSRWFANVVPETVGQFTGLKDVNGKDIYEGDIVKVWSDMSELTMVPVINEIVSEDLFGIPGMFLKPVGTHLIEPCLHDSWSNQFEIIGNVHENPELLKG complement(2189540..2189707) PHAGE_Lactob_Sha1: hypothetical protein; lp_2432; phage(gi418489791) 5e-09 MPKHTKKRSTIKRKHRRMKQHAEANKAKAQDSKQLAKEYEPYNIRKWAFEAFKED complement(2189700..2190080) PHAGE_Lister_A118: gp63; lp_2433; phage(gi16798850) 1e-29 MNKVVIKGELPSLNEYIKAERANRYAAANLKKRYTALCSVYARASRNSGVEFSWPCKLKFTWYTKNNRKDADNIAFAKKFVLDGFMKAGLLGNDNRKHITGFQDEFAVDKRNPRVEIDEITEDEDA complement(2190077..2190595) PHAGE_Lactob_phig1e: hypothetical protein phig1ep52; lp_2434; phage(gi23455787) 1e-36 MTETQVLVINANLPDIDHPLAIGPEPEMFKLAQHNYKSGEWPFPVRLVKPGTKVRSDAAYLSSMKQDPKQGEREDIKAIRQAHKHGKHTLRELADSTAIELNRVKDLVHKYSLPLSNGYWRAEKHNNPDEVIAYQTLARLCERIDASELSIRKASMSNGKVNGYYISWVPKV complement(2190592..2191122) PHAGE_Mycoba_LeBron: gp117; lp_2435; phage(gi304361052) 1e-07 MIDDISTAFKWNQKDALFAEQILAYEGTPAAIKYFSAHSSELSDYGYWFFLSTLWVSYTEYSDLKIWKTLFASQRPNKAIGIMKPSELKAFDNLPNKLTLYRAHRPNESDWIAYTLDTTVAKHFAKEHKVNQISVYRVKKNHVLALFLRRSEQEIIVLDKSLVKLKKIIPLSEVSA complement(2191119..2191406) prophage Lp2 protein 21; lp_2436 N/A MNWGNQLVNLAANHAYEPAALHWTKQRMKRHLKAGGSAQDEVCAHEYKLFALEVLIIEYQRDGLNFDLTQCWGKPAEYFIDLEQARQGLQTGVSA complement(2191403..2192380) PHAGE_Lactob_phig1e: hypothetical protein phig1ep54; lp_2437; phage(gi254854754) 2e-38 MNAAVTESTEWVKGPLIRTGGANLDYFKQRRAYRNFKMYEASVSNGQNNLYRELLDYANDEGKLDVQFRMKNSALLSLTGLSEPGLDKARNSLVQLGLIKYARGKKNVKPPEYRIINLYSRSAGYPTSNPTTSHKSRPTGLDEVGQLVGQGGGQPVEHKELTNTDPDLTDTDSYDDDAGVTREQVINDWTNLWGFPNGVARPEIDEWLAVLKPELVAYAIQIAGEHDVQSRGALKYVRAIIAGWKKRNITTLEQAKKAAANHDDRMKSERKPSGYSKPRRKEVTPKWMQKGASQADSKSNSSDDQQDDMSDEAFLAFMNSQEEAK complement(2192478..2193143) PHAGE_Lactob_phig1e: hypothetical protein phig1ep56; lp_2439; phage(gi23455784) 1e-72 MALFTVDTNNILGQAVEEAGTYNVVVAPSSQYTTTQQAGNPMAVFDYEVLDGKYKGGRIRFDNEVWDTSTEEKGNLSIKRFNTIAVALGAANGTSFDSIQQFVSQAVGNKLAVTVDWETGQNGKTYLSVKSHKPFMQDGSKPNGVKRPNGSSTQSGGFAPRNSSGFGGQNHNNGFGSTSAPNPSNNSVPKQQGNNNSFANQTGAGYKGGQPFDNVPDGLPF complement(2193146..2193808) PHAGE_Lactob_phig1e: hypothetical protein phig1ep57; lp_2440; phage(gi23455783) 6e-110 MKFYEDGNIPEIPNMYFIYGDGGTGKTSLLKQLKGHKFVFSFDMSSNVLIGDKDVDVVIFEHNDAPNIQAMVEECIIRAIQNAKYQVIVLDNVTALQNLVLENIDNAAKDNRQNYQKLQLWFRDLGTILKESGKTIYATAHQLDNGSSGISGEGRFQADMNEKTFNAFTSMFDLVGRIYLAAGERMIDLDPEKGNHAKNRLDDRKLIKANELIQSEKGEK complement(2193815..2194324) PHAGE_Lactob_phig1e: hypothetical protein phig1ep58; lp_2441; phage(gi254854755) 3e-58 MIKEETAGMTLDEMEVKLEQATRDKKAFKKAMLKPQMEVDKYRKAIKTVDEQIDQLQELQRMAMGDQEQVDTEFFHFKMGTVNPSTSRNWNLERDKDATPKELTAVFERFDDTLIKTSRSVNETEIKNRLASGELYVTPDGKIMDSSLKALPGYSGALKKPKISVKAKG 2194512..2194943 prophage Lp2 protein 14; lp_2443 N/A MKLLSVLAARVLPILEQLFSYSNLAFSDTLRTSNSFGLLKCVKNIIQFFNRDLLVKHISNPECKFHCIFASSRPLRYTCYKGVIMMYFSIKKASNGQYYFVIRSSNNEIVATSETYLTKYSAEKTIESIKNDISPSSIVIDMT complement(2195192..2195704) prophage Lp2 protein 13; lp_2444 N/A MKNKFTEQLSLALGRDKAQTQQQIADRTHVSPGQLSRLKSGSRSTDSQIRKSLANVINDFWLSYSGARENFGVLSFQNDRQLQGDMFSALMKQKKEQRQRERIEAEFEEAITVKPRDRTPAQQLVIERYPREYAEEISAEITDLAKKAEYAGIPMDKLQEVIDKVNQENG complement(2195772..2196077) prophage Lp2 protein 12; lp_2445 N/A MSDTILIRHEAPKGFQFISEEEYERFQAWKQAQRGIRTWKLKDLAKYKYGTKSTERASRYLTKHRHDLDIEQGGFIDYVNTHNGWQIPAAEMMDYLLDHPD complement(2196119..2196259) prophage Lp2 protein 11; lp_2446 N/A MKPITRDVLINALAKVKPETPRVMFEALSDKALDAEFRAVTAEYNE complement(2196256..2196483) PHAGE_Geobac_GBSV1: immunity repressor protein; lp_2447; phage(gi115334658) 1e-06 MILKLKYYREAMNLTQEELARHAKVSVAMVQSMENGRRKGSTDTILKLSDALNVTVDDLLRGNNMTISHKKETSK 2196612..2196974 PHAGE_Lactob_phig1e: repressor; lp_2448; phage(gi23455773) 6e-15 MTIGKRIANLRKQKSLTQPMLADAMNVSQSTIASWESDRRSVSNDDLIKLSDYFGVTTDYLLGKNGTPKWANEKDTKDLQDFLDANEGSMTYGGEDLTEEEKQQVRVAMATIFWKRHKHD 2197016..2197399 PHAGE_Lactob_phig1e: hypothetical protein phig1ep06; lp_2449; phage(gi23455774) 4e-09 MVNRYHTADPFVIAEKLNIQVEWCDFGAMPLGKNAYDNQEPIILLNDSIKHTPTQYFILGHELGHVIFHEGLIGYYTSVKHGHSKFEREADEFSVGLMGMLFIEENGHIPYSYRELSYQYGVPFDGD 2197426..2197761 PHAGE_Lactob_Lj928: hypothetical protein Ljo_1464; lp_2450; phage(gi41179289) 2e-24 MKKMSIGFIAVIAIIFTLTGCGNKKPDYTASTAESALNTNKDIEGKTVQFKISKVVPNSAFGYNLETGKHLNFVSSENPKVNKGETVTVRVKKASSSVGSWVISYTNLKKD 2197887..2198948 PHAGE_Halovi_HF1: putative methyltransferase-endonuclease; lp_2451; phage(gi32453891) 1e-05 MEKSEFENKINGLSKKVDSMSEMLKTEEATKNALVMPFFAALNYNVFDPTEFVPEYTADFGSKKGERVDYAVVINGEVQILVETKELSDDLNKRDSQLFRYFTATKAKFGILTNGDTYKFYTDLEEPNVMDKTPFLTIKLSDIKDTQITELFKFTKDNFDIDNITDSASDLKYVGLTKEYLKKQMNNPADDFVRLILAEIYDGMKTQQVVDQFRPVISKGFTQIISEQVNSKLSNALNQTVKDATASTESLKDTPDPKAEIVTTPDELESFAVTKVILRETIGQDRIVYRDNRSYFNVLIDDSNRKWVLRIYFHTNRNFIILHDDDNTELDFESPVDIMNYSDQIKKVAEQFK 2199001..2199086 tRNA N/A GCGAGCGTAGTTCAACGGTAGAACAGTACTCCTATGAATTGCTAACTAGATACTTTCAGATGCAGGTTCGACTCCTGCCGCTCGCT 2199112..2199288 prophage Lp2 protein 5; lp_2452 N/A MDSEISKYELIATMKKDIQTFMDSESMLYLKKDSYSTEEYDRMLTEVKDALKTRLLQK 2199331..2199414 tRNA N/A GCGAGTGTAGTTCAACGGTAGAATGGTTCCTTTAATTCAAATATAGCCTACCTTCCAATGCAGGTTCGACTCCTGCCGCTCGCA 2199699..2199772 tRNA N/A GGACCTTTAGCTCAGTTGGTCAGAGCAGACGGCTCATAACCGTCCTGTCGTTGGTTCGAGTCCAACAAGGTCCA 2199778..2199848 tRNA N/A GCGAGTGTAGTTTAGTGGTAAAACGACAGCCTTCCAAGCTGTAGTCGCGGGTCCGATTCCCGTCACTCGCT 2199896..2201644 prophage Lp2 protein 4; lp_2453 N/A MRILIDKIKINKFRKFSELGQIQLGHRITVLSGHNGVGKSSIMSLISSTVGQNKVRLNGSKFQPEFNDYFTIDPEREGHDFPAYEILVDFISQTNTGNYEFAKRVGFKDDRNQDRGIRPLPRPALPLINKNGYQTISQAQDAAFKMIGDIIGKSGSSRVHLPCIYISLSRIMPPGETTLIIEDFDGKTKKLSEELSNKYVEWYNEVLPNSINENSIIAKSVEKKSTGKTRLFILLADATASTQSVGQDNLGGIISALVDFYYLSKTSDDYNGGVLCIDEIEASLHPNAQLKLMLLLDKLSQELKLQILITSHSLTILKEILIQQSKSAVDYQLVYFKGETYPYASKIDSYRSLKADLFNEITVSKPYVKIYCEDEFTVPLLNHLLKAAYDNEILSKSLPEYKIINVALGKDNLRSLIQLDSYFSHVLIVLDGDAKLKDRIKIETYFKNPHVFEGRTERNQPKNVLTLPGFMSPEEFSYVILWEYVNNESQHLQFWRNLERNQDLALMTADKAREAFTPKGDQVKFKDIHDKHDLKLLDFIGKSNILSDYYSLDDNQIKLKDWTNSFKKILVSFEKDLKAMRY 2201698..2202612 PHAGE_Synech_S_MbCM6: putative cytosine-specific protein; lp_2454; phage(gi418487528) 2e-06 MPQTSSVFRYPGGKTQLYSFVHHLLKINSITDISLEPFAGGAGIPLKLLIDNRINTVWINDYDKAIYSVWDTILNDPVALISLIESVPFDYHSGHKISPEFSISFWKKQKDIYLNNKNHQHSIELAFSTLFLNRTNTSGIITAGPLGGFKQNRKTQIYARFNKETLINKINLIHSFKSQIKLTRLNTLDMIPKIRNSVDPKNSFIFFDPPYFEQGKELYYSSFNEQGHKELANGILSLKQYHWITTYDTAPQIQEDYTMAKQKYEYSLNYSANNKNRGKTAEFMFASPVTRLSSFEKVDLTPLA 2202699..2203820 PHAGE_Lactob_phig1e: integrase; lp_2455; phage(gi23455777) 6e-38 MSVTKLNNGKWQARVSYKDDDGNYKSVTHLEKRKTDAVEWETKTKNALLEGADLSRSTESLKHYFLDWIRIYKTDGVSRHTHELYMGNWRHIAAYFKDRPMSAIKRPDYQKFLNEFGRSHGIATSHKLHQQVHTAIKDAVADGILKRDFAYKAHVTGRPPKPVEEKYLTLSDYKKLRKYLIKTADYDHMTMLMMLFQLETGTRFEEAAGLTWDNLDLNNGIVHIKQQWDARRQTFRPTKGNGQADGDITIGPAYCRFMRSYRSTQKDYLELHEMKNPKNLVFWSKLGKIVGNGNANEELGRICNRLKINKVTTHAMRHTHASILILNHESLPYVQHRLRHQKLETTVNTYVHLIEEENGVSDKKATELMDEGF complement(2204049..2204121) tRNA N/A TGCCCGCTGGTCAAATTGGTTAAGACGTCGCCCTCTCAAGGCGGAGTTACGGGTTCGATCCCCGTGCGGGTGA complement(2204171..2204377) prophage Lp3 protein 24; lp_2457 N/A MSKSELDHLFDHLRQQLIVWAVTAIGLAVMRSFLLPQLLTFVFWCSVAYCLLLFVGLVVVTIFRWQKS 2204512..2204584 tRNA N/A TGGGTATTCGCCAAATTGGTAAGGCAGCGGACTCTGAATCCGTAATTTACTGGTTCGAGCCCAGTATACCCAA complement(2204797..2205102) prophage Lp3 protein 21; lp_2460 N/A MNSFIKKWLFEVTLNITLLIVPAYLIVSSIFQDGPIVLCLSTPVPVFGIKLLTFNFMVLSVLDFLHWPSDYHEPKTIRKVIFVIHITIAVIALIISVRLMA complement(2205185..2205565) PHAGE_Lactob_Lrm1: hypothetical protein Lrm1_gp49; lp_2461; phage(gi195661249) 3e-06 MILMRQDVKKICNLLKQYAKLKRELTAFNQVSSPSFDGVSSHSSRNGAESRLINHVDLSYQLKEVEDVLNAIDDPQYQFILHDYIIKKRFSRSEACGQLSVSVSKFNYMKNEALHAFAKFYSDLTV complement(2205707..2205976) PHAGE_Strept_YMC_2011: putative DNA packaging protein; lp_2462; phage(gi399498724) 3e-06 MAVTVDDIKLSLRIDVTEDDPMIKSYLDAAKDYVQTAVSKNEDLTIYKQYDFAVSLLTQFWYQNRVTDMTKTPYQVVSMIQQLRGLVAG complement(2206071..2207573) PHAGE_Entero_EFRM31: major capsid protein; lp_2463; phage(gi327198115) 3e-44 MTPNCEHKRRSQKHPKTGPAENSADPQPKDSQTSKGKTISGYAIVWNSPSKDLGGFTEVVTPKALDGVDLSNVLMLNNHDYTQVLASVKAGTLTLETDDKGLHFTAQLPNTSFANDVYEEVQSGNVDSCSFGFDSDDDTDEWTKDDGGNITRTINQVKSLFDVSVVAVPAYDDTNVQVDTRSYEKFINQEKEPDNMAKQTIIDPNGNENKTGIPAFEQYVRTHGETRDGLKTDGVSAVIPKELITPVFQLKQSNYNLAQYATVKQVSSGSGTYPIATSRQSAVLATKEELAEIADINANMFTEVPFDVKTRAGKIALSNEVVEDAEVDIVGEVKNQLQQLVDNTDNTQIMSLLTGTSFTKATATNIDDLKKVFNVTLDPALSKMWLVNQSGFNYLDTLKDSEGRYLLQPNPTAPSGFTLLGAPVVMISDKLLANNVDGTSPMIVGDLSQAVAVFRRNQVTAQWDKFDQFSQGLSVIVRNDYKVIDKTAVINVALKTTPGK complement(2207595..2208695) PHAGE_Staphy_StB20: portal HK97 family; lp_2464; phage(gi431809767) 1e-51 MSFFVKSNTTSGTHDPVADALVSLSSNDPYTFVSAAVLRNSDIYAAINIIASDIASNPIMCDTAIFNTMINQAPNSQMDGYHFKYALAANLLLNGNSFAEILPNHTLKLIANNQLTVEQDDVSGALTYTYTPIGGNSRQIAPNNILHFKYFTKDGVSGISPLYALKDERQIQSAGNKLLTGFFTAGVHGTTIIKVHQSDLGPEAKGNIRKQFDEANTGDNAVNTIVTDDTMDISNLSLNTDVLKLVNSNDWTTRQIAKAFGLPPERLGVENDHSNQEQSGVQYLQGTLQHYFDSFTSELSFKFGHDFTFNTDKLLSLDPQTQQAQAVAGFTGGVMSRNEARAKIGLPPTDDGNIFLNLQKNGVTNS complement(2208850..2210553) PHAGE_Lactob_LF1: bacteriophage terminase large subunit; lp_2466; phage(gi418489385) 2e-114 MIEYVDQVLSGQVLAGQKIKWACERFKRDLSRSKDDSFPFYYDEDKAAQAVKFIELMPKTDGSQLTMQPFQKWIISELYGWREKTTGNRRYDRAFISMARKNGKTYLASGMAANGLLRERQPARNRQVLFVSNALKQAKLGYDMLSSGLRQVRKQSKYMRQRIKVQKQAITDLETDSQALALASDTSTLDGYAGTTVILDEWHEAKDRKVYNVLKSGQAQEDNSLLAVISTSGLNLNVPMHAEYDMLTDVLKGKTEADRYFVAIWELDDREEVYDQANWIKANPLFSEPHVKQRMTEKIQADVDLAIKQNNLIPILVKNFNMWLQASEDSYISADDWAAGKLAKVPDLHNRVAYIGIDLSKSNDLTAVSWLIPIGNGQFYCDSHSFIGIKYGLSSKIKRDGIDYRSMERAGECSITRLDSGIIDYDDLFDFVQKLIGKYNWKVKAIAYDPYNSQTLITKFEKLNYPLFEVRQGTKTLNIPTRNFRDQLYDNKIKHNGNKILAYAVNNAILKVLNNGWQLDKARNSNRIDPIAALINAFVAGMDYYQESEDQQHAEDYYKTATMADLF complement(2210550..2211023) PHAGE_Strept_2: hypothetical protein SpyM3_0947; lp_2467; phage(gi28876231) 1e-14 MGRKVKPLASMKKHLTNDERDQRKDAEKALFDYPSLDLTPPDWLHDRALTEWQRVAPYLKANTPISELDRAMLASYCRAYATVQTCENDIRKNGLVQTNQKSGVRKPNPYVALQSQAMKDVKALANDLGMSLSSRARMELNKQKDETPEDTFEAMLS complement(2211806..2212195) PHAGE_Staphy_phiPV83: phi PVL ORF 63 homologue; lp_2469; phage(gi9635713) 5e-21 MAKPMKQCEHPGCRTLVAYDTRYCEKHRKATNKWRYHKRMYDSDESKYQQFYKSSAWRKLSRRFLESNPVCVQCYQDNVIRKANVVDHVIEIKDDWSRRLDESNLQPLCYRHHNRKTRLAREQREQTTK complement(2212188..2212526) PHAGE_Lactob_JCL1032: putative head-tail adapter; lp_2470; phage(gi418489120) 2e-08 MKNYNLSRLNKRVQFGTVKTVQNLINGTTKQQFVPLFTVWYGEYTLTISNTISLTGMTATTNQLIAVRHDDRITTALVAILDGVTYKVAGVSSDSDLNAYDVVTLTKVNGHG complement(2212513..2212704) prophage Lp3 protein 10; lp_2471 N/A MKIKMVHADNMEELFAQVSEVSKAQDIDDELIDNGFDFIKVSDSKMIYCEALVYRTGDEDEEL complement(2212726..2213199) prophage Lp3 protein 9; lp_2472 N/A MKWQEMQLLRDTKYSSSENLKKFEDVFKFDKCAVYERPHSLEKLLAGKRSYNAGNKYDTPPYLGEWLDHAELQKVSGTARVVAIAHDYGPADSVHSKIAEHVLSLDLVGVIFDSKVDWYYPGQSLLVMIMSKETYNYYYYDLLANHHVVDVVKKQYY complement(2213345..2214739) PHAGE_Staphy_2638A: ORF003; lp_2473; phage(gi66395453) 7e-71 MGKAMDLPAETREAANNVIKMQRDADWQNDFKKNSDDGIKTQSLYNIRLIMEHDEMLKGLVAFDEFSEQIVKTPQAENSLFKKGFWNDGDDTLLRSYIEDHYNLLFSKENITDAVVTEARRKTINPVKARIEAVEWDGQPRAERYFINYLGAEDNHYTRTITKKWLTGLIARAYVPGVKFEIVPILEGSQGLGKSTAGKNLYPDKFNDSLKGMGKQKDDYQQLQGSWIIEVAELSAMKKTDIEGIKNFISAQSDTYRNSYGRYALPHPRKCVFIGTTNQTDYLKDATGERRFYPIKCGVNKAKLDVWHPDENYMLQVLAEAAYWFKNGEPLYLDQATMKEAKAYQMAAEAVDPMRDAIEAFLAMEVPTDWENMSTSLKQSYVSDYGHHSKWLQDQVSNERKLLNQTTTREIMEVVFHKTVDRYLTGRTNSEAKRIKLLMDNMDGWKSQRIRMNGQRLHGYMREV complement(2214739..2215539) PHAGE_Lactoc_bIL310: hypothetical protein bIL310p24; lp_2474; phage(gi13095885) 6e-20 MREFSTLDKAIELAQQGYSVYPLIENMKNPPKGVAGYKDATIDQGTIFAWFENHPNYNLGLRLDLSDLLVVDVDMHDQTKNGRNSLAQLFKQGQTLPNDTYIERTANGGVHYFLKYAGAKVRKVDVWPGIDLLSDFTVIAPSEINGKPYEPLDDRTLTDIKPAPQWLVDKLAGQKVNWTSEHAYTTRQKKYTGRLLDEMVTGTTQGNRNAWLTKIAGRMFGVGAAPKTVYNMLSVINDSFVDPALPSKEVNVIFRSILKRESKGVH complement(2215536..2215790) prophage Lp3 protein 6; lp_2475 N/A MDIEDLRGEVIKTLGLHEALSDIVDSLSDSLEENKQNSSMVQYNLKREIRPLSSLTWAINNELIKIADATDELTIKCARAGDKK complement(2215911..2216018) prophage Lp3 protein 5; lp_2476 N/A MIATAILWAIKFMIVSFVGNVAFELIKNPRRYFGM complement(2216061..2216249) PHAGE_Lactob_Sha1: prophage Lp3 protein 4-like protein; lp_2477; phage(gi418489838) 3e-06 MMNMKNSFPRYMTYKQAMECLNIKSYNTLYKYIKQGLRVVAINGTKRIDQLDADKFMEAHKI 2216441..2216452 attR N/A CCTCCTGACTAG 2216566..2217132 PHAGE_Lactob_AQ113: putative transcriptional regulator; lp_2479; phage(gi446730276) 2e-08 MNKIKELRQYMGLSQAELAEKLNVTRQSISLYEKGQRVPRINVLKNMEAIFGVPISYIQGQTTYLSPIDKANLVSQKIKFGKDEQLSVLTQVLDDSKKDDVQKLKKQLNDLDKIIDTLSDTTIKSLYTSVNFLLELDQSDDSLLQQAYFSLISKLELALNSKTEISRKFAEHIFKDFFNRLKEFSYKK 2217185..2218342 PROPHAGE_Oceano_HTE831: integrase; lp_2480; phage(gi23097608) 6e-65 MATIKKYQDKDGNTRYQFQVYLGVDPLTGKKKNTRRRGFKTKKEAQIVLSRLELDIYNHGLPTKNDNTIFKDIYQLWFTQYKQTVKESTWVTTQRLFRLHILPIFSDYRIAKISIKDCQKAINQWFNAGLAKYHTLMNYVAKVLDYAINIDLISENPAKRVIVPVNKNDRSRKNLENYFDKAELQHFFECLTDDDNTPQASVFFRLAAFTGMRKSEMLCLEWSDIDFSNHTIRVNKTQSRGDGARLLVQAPKTARSNRTVYLDPTTIKILQHWQVDQKKWLLRFGFNINQGNHYVFANENNEMFQPSKPRKWLEHTLTKYDLKHVTVHAFRHTYATLAFEAHASIKSVQDQLGHSSYRTTLDIYTAVTAKQKNEATEKLANYLNF 2218833..2219066 hypothetical protein; lp_2482 N/A MLLVYKDVFGIDHNDCHIVQTRHEFNRIFIIENEVGSRFTCIKDDAPLEKKMSGHWKYAKASDAPKNYAVPYKAQKN 2219091..2219363 hypothetical protein; lp_2483 N/A MRRYQPLTKSNGRVPHSLNHNTNPYYGQHGADWVKDTNASLFNAQHEHLQSKSHVERRVRHNVRQVLWVVVAILAMLLGGFILFSLAINI complement(2219412..2219897) transcription regulator (putative); lp_2484 N/A MMKTNTKKAKYDDAELFEKVLVGMSWLESHLREIIQTMVTDADVSFEQFLILYYLDHSTDHRITVKELAADRHVSSSAISRKLTYLINNDLIVLNIDPYDRRYRYLTLTAKGEKLARVIEKVNEERLGKFLDEFGRIRTSELTDELRMVSKVLVDTKEIKG complement(2219952..2221928) PHAGE_Human__8: LANA; lp_2485; phage(gi139472804) 4e-08 MKMFNKKRRDKNEDYRNHSERATATSTVAAQKPKPKATQSSTTPNVRSSAGVRPTSSSVTASTSAPVKGQNRVNQRRATQTAAKNSVAIEREMADLNKQYQTLRGELKVQLVQDRKHEKQQYETLVAEQLNLEQQLKDAKVTLSKQDKVVNTNDSERQGMVKTINAAQKRYDDAKKALAKSDQTIKSLEKKITQSEQSLADLKQNEADMRKAIQGEQDLKKLFVLMKQQEKQAQDLYQKSDAINSELVKLQKREQTETRERSRKEHAITSAEKDLHTAQDALVAYDRKKKSAQDEQERSLNLINQKINRLQHDYDQNATIVKGLQQKIESIDAKLKSDYGTTHLVSPVEFDQSAKYFLFSTDLIQSLSGDEKASMEMIMGLLKSEVKDKANVITVNYNDSLPEIWNSYQSAGLVDKRTGLYNMYYTIQAKVPGAVAKTKPELPDNPAWQYKRNADKQIVSIADDGGNPIMTLKYRKNGAIWYMTYFNGSLATRRDVYDAAGFLSVTQYLDRTNNSQVTLENFYRPDHSLAMVKQYGSNHELSIQLVNKEEAITNVFHSEAQLLNWWLASVLQQQNSVLVMGVNAPLFDQCLQATNDNFHLLPIVSADDLDNQHVQDIINGKSKLSSLVVTDRDVQTAIEKQMTRDLEITVMPAAEVRA 2225484..2225495 attR N/A TTTTGATTACTT #### region 3 #### 2983800..2983811 attL N/A TTCATCAAAAGT complement(2998563..2998805) prophage Lp4 protein 13; lp_3377 N/A MDKITIVLWVLAIGTTIFQYIAGYLKWSRCQWICPVLFSIFMLWFYFNGKDVSLISAVTAFIIGNIWYMAYAEMGKRKRN complement(2998911..2999324) prophage Lp4 protein 12; lp_3378 N/A MRVLYPKLVEEAYNYIAKAEPAVKNAPNAVKSEIYSKMVNDGIIDENGEPTQTAIDRGFVDGDSELDYEPATLAEFKAMHPCYKEYDDSHFSHTDQGWVIDSYVMKSLSLKALHDPNSSEEQRSFARHALEEIERFS complement(2999326..2999724) PHAGE_Strept_M102: hypothetical protein M102_gp29; lp_3379; phage(gi242345600) 8e-09 MRKNRSDGMMLSMTEFKVLNMLPRGAGYPMTTPNICKVTGLKERDVREAISILINQHGVPIVANRSGHNTGMFIATDEAELNIGVTSFKNQVTTMNARIRAIEQADLNGWEKALRPDIKRLETQVSHDKEAN complement(2999780..2999956) prophage Lp4 protein 10; lp_3380 N/A MQIERFWEVFHGQDLDRLVDKAHEDAPLSSEVYQVQVKYLNNEYVLTAIYEHEVNVDD complement(2999983..3000441) prophage Lp4 protein 9; lp_3381 N/A MKWEPIKLLRDVPNSSGRLLIKFTNYFGFDRCAWYERPYSFAKLLAGQHSYNAGYEFDTPRFNSRWLDHGELYKVNGTSLVVAVGHNYGPYEDIIKCATDVAQPLGLRAIVYDRAVDWYYPNETVLVVYMADETFKRYEHKLLSFASVEALI complement(3000950..3002452) PHAGE_Lactoc_bIL310: helicase; lp_3382; phage(gi13095886) 4e-89 MDDEIKKAITNYDDRPAMTKSTQKVFKNQQEMRTVLRDEVEVWQLIHQTDKQAEANIKPKLPPLAGARIMFRHFDFCLFSHDESERMAAYLPNDGIYTQNYRYLKRLIALMYPSYNLRQALDVIYHLEMMAPVRALTIDRYLVPVNNGIWNLHQHQLIPFSPKYVFTTKIATNYRDNATTPNIKGWTIDNWFDELACGDDEIVELLWEVINDCLNGNYTRKKAIFLFSELGNSGKGTFQELITNLVGMDNVGTLKVNEFDVRFRLAGLVGKTVCIGDDIAPDIYIKDSSNFNSVVTGDLVNIEFKGQDGYTSALRCTIVQSCNGLPNFHNKGGTMRRLVIVPFNNHFQGKGDNWSIRNDYITRKDVLEYVLYKALQLDFDKFSVPEVSKKALADFELDNNPLIGFKVSFFDKLKVDKVPTYYLYEYYKKYCSINGLKALGQSKFIRRFMTCVPLYEKKQAKLSATDINTLDVFKQQDEIIAWPREPLAGKKYNCIVQSTL complement(3002467..3003246) PHAGE_Strept_Sfi19: putative replication protein; lp_3383; phage(gi9632925) 2e-22 MKANDRLMRALQLARDGVAVYPLASNSKVPLKGTQGYKDATTDVEKIKGWFEHVPGANLGIRLDQVKLLVVDVDRHGDIDGVQTLKRLNEHGKTLPSDTYIEQTPNDGLHYLFKLPDKLDMKRRTGLYPGIDVLADFVLVAPSVINGSAYRAIEPTNEITTAPQWLIDDLLPSQRMNKAPQPASQIRKTWAGRMLDDLVAGTGEGSRNSYLTSLLGKLLRTGCNGMTAYELLQYANERLQPPLPDKEVNTIFKSIIKRT complement(3003259..3003480) prophage Lp4 protein 6; lp_3384 N/A MNNAQTRLNHARTTLQGTLLQLDYLQELVNETAMQDSQRAKISQQIHNIEVNNQGALKQLASVYEVPLVGIAK complement(3003473..3003901) prophage Lp4 protein 5; lp_3385 N/A MGKPIYELSKLNDISKACKQAAITIERVNVANASISAISELVTPTLKQAITGDDNVNYFELNDDELRDFIDEQGNTIYNTMCVLTEMDELSALIDSKTAALSGVIGDINSTVNGINDSINSVFDGGNSDYSDDNSQGATDHE complement(3004213..3004509) prophage Lp4 protein 4; lp_3387 N/A MVRTITEPIKVLLSDEQAQALRDFVYQLTTDSISQAKRDVGASQQWLRKKKAAAYADVSEGTFAGWTKHGLTGHVINGSVLFNKHDIDFYINHNGKMK complement(3004648..3005337) PHAGE_Lactoc_bIL311: Orf3; lp_3388; phage(gi13095661) 9e-22 MNDLVTLTSQRLDAEAYTTAEIISQYAEIGLRTVNNRINQYKDDLMEFGMLRFSTINVQNYPDGRPQKYYQLNEDQAMLLITYLGNTKPVRQFKKALIKQFSDMKRELILRQAKFELGKEFSKSLHEAIRESPALGEHGHLYVNINKLVYKQALGVNVNELRKARNIPKTEAITHYLSSSEADAVKRVKQQIRTLLEMKMDYQQVKQALQIQGVIYRIELQLPAKASVK 3005702..3006082 PHAGE_Bacill_phIS3501: transcriptional regulator XRE family protein; lp_3389; phage(gi422934302) 5e-06 MSIVSLAKQSGLSVSSISAYENNKRQPKIESLQKISKVLGVSSAYLNGMSEEKNILNVNSQSLKNNTIDIDVIGFLLNVRSTYPGKVPIFIQDVLAGAPIYIDDNGNKLDAKKRKLLITFLKTLLN 3006114..3007280 PROPHAGE_Oceano_HTE831: integrase; lp_3390; phage(gi23097608) 1e-56 MKGIINMATFKQYKTKSGAFWEAFTSVGKDTNGKAKRMHKRGFKTKKEAQLWTSNVQTDFTKNGFIANDNITFAELYTKWFNEDYKEQVKESTYMITDDIFRLHILPELGSQRVKRITVAQCQSIVHKWLNQGFKTYRRFRTYAISVFDFGVRMELTTRNPMAKTSIPKQKTKPQAPHVDFYEKSELLHFLDCASKHENPQAFMFFRLLAFTGLRRGEALALQWSDINFETNELTVNKTQAVGKRWRTIIQTPKTNTSYRTIVLDPDTAQWLHKWKMTQARQCFELGFNANDPSQLVFTNQQNKLMSPSTVNYFNWSICKKYGLRHIKIHAFRHTFCTLAFEAHAGINEVSKTLGHADLKITEQIYLHVTKKQKNETASKLARYMSEL 3011137..3011148 attR N/A TTCATCAAAAGT