gi|58036264|ref|NC_004307.2|  Bifidobacterium longum NCC2705 chromosome, complete genome. [asmbl_id: NC_004307].2256640, gc%: 60.12%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1288882..1288893                   attL                                                                                 N/A                 GCGCAGCACGCG
1298692..1299417                   PHAGE_Rhodoc_RRH1: HNH endonuclease; BL0372; phage(gi372449820)                      4e-05               MKRKRVPPNMAAQVLLTFGSDCWLDMPGCTHRGTETMDHVKPYSLYGPTVPSNLRPACKHCNSLRADRVVSGFGAQVTAVIGPPCVGKTAYVRDHMAPGDIVVDPSRLAVACVDGGSEAHALADTLWGSAYRRVSRMVTARHVWLVRALPTSRNSPNMLAEWIALNYDVVVLDADDQLLRGRMAECRRGREDVELLKRWRRLGITQAKVDGMLETRRTQLSRLRLIDGPSSPPAVSARPRW
1299533..1299895                   hypothetical protein; BL0373                                                         N/A                 MKPVPDSNTDRLGAQIMDDNDKQMTLPGMEDSDELTNPLTSSTKELVTELLQDAAQLTPQRRALCTLLLTCARTIDRLCRKGRDISRMVTSYNETIDRLQPSETSAKAGDLAQLLKDMAQ
1300267..1301343                   PHAGE_Rhodoc_RRH1: terminase large subunit; BL0374; phage(gi372449802)               9e-39               MSNGSMALPLVNGSTLRPGSMTESSGHGFQGDFINLDEVWALSALQAKQILDGFIPTTTTRMRATGVRPQLWITSTEGTAESEYYNALLDRCRAGDIPKRWAFFDWGLDPAKDSEDLDAVASAHPGCGYLFDRRQLKDFRDQFADDPAGWRRAFCNLRDTSSTERVYPAALWTETETAPLDLSALDLDTLAFGVAVGMESESTAIAAACRRDGVTVVQIVDVLPGTAGAAERLADLQSRYGGAPIAIDRRGPSAPLADRLHEVAADGTPEYRLSDIGNTEIVAAGVLMLDRLMQRQVLHVPDPALDDAAAVAVRRWVADSWVLSRRNSEQAINALEAAQLAVTASLHAQPAAPLQIFG
1301430..1302551                   PHAGE_Strept_TG1: putative portal protein; BL0375; phage(gi410491911)                4e-28               MSFISRISNTAALLLRAAQTTDDVEEADAPTLPPRLSTSHDPLALSTVFRGVQIIETAVSKLPLIQYAPDGSRMRPSTLITRPDLNRSRRDLFGDLVSALALNGNAFLLKVEAGGVLVGVRSLPPQLVTVTDLNMDPANPRLRYSYRGVDYGADRIVHLKLLNVAGRLRGMGPISAAREEIEGAQDTRAYASNWLDNTARPAGILKSDQILSDQDARTASERWAKGGAGGVRVLGKGLDYTPLALSPEDLQFIESQQFNTTQIARLLGIPASLMLAKVEGTSLTYSNIEQEWLTFAEYTLSAYADEICEALTSLLPEGQWCMPDWDSLHRSDTNTRYSAYQTAISAGFMTVDEARAREGWAPINQTTPQEVTL
1302548..1304122                   PHAGE_Marino_P12026: phage prohead protease; BL0376; phage(gi399528321)              5e-09               MSEEVRTITVKGIELREDQGDGTRIEGIAVPFGQRIGLWRGAAEEFAPDCDFGDTTRTKLSRDHDRLIGKVTNATREADGLHITASISDTAEGRDAVQLIRDGVLDSFSVGFMPVTTDKRTEGDTSVYVRRAVKLLEVAVTGIPAYTGAAITGQRDQEHVNQETDTKEETVENEQQPATESRFDQLEMQIRSLADTIGRQKPDPPHVIGGQYRSAGEFAKALAAGDDTAYEFMREARDLISSADTNNTNEWVADQIKLIQSRRSVANLFQHAALPATGMTLEYLKLGSNTLKVAEQTAEGAALTTGKITLTSATAAVKTYGGYAPLSRQVIERSNTPALDTALRALTIAYSNAVEAAARAQLTAAITGAAANKLETPAAVSALTADQWITVIINAAEAADGRGAQLGTLAVSKDVFDKMAKITRSGDALMDVSGEGVDKLGSLSLTGITGRMLSVPVQMVPGAAANTAAFIDPTALQMWEAGGPFQLQQDDTTKLLSNYSVYGYAAFATVFTGGVMPLGPKATA
1304133..1304459                   hypothetical protein; BL0377                                                         N/A                 MDQLHDKFLSMMNVIGSDDETRADDCLATARAYLSTNLGETWDTVPDLIQSDCVLAVAADLFNQKDARNGVMNVDSDAIEPFRVSADPLRAAWPKLRAAGVLAGMGIA
1304456..1304821                   hypothetical protein; BL0378                                                         N/A                 MTNTITGKIDALMEQVAGACGDLVEHVTIDETEVKPPRGKVCVWVKPPEVAWPYAGAENELSVRLVFVAGSPWAQASALPLLLAAMDRLAASALPVTSAEPVGFTRGDATLAAYQITLNEI
1304839..1305261                   PHAGE_Rhodoc_RRH1: putative tail protein; BL0379; phage(gi372449810)                 3e-15               MADKIRTLGPGSLVIGSSDDQYKLDVDCTSVELSPDNSSEDPDTYLDGHEEGGALSTSWKLSGSIGEDFSMNGAQVYCLNNAGETKPAKFIPNTSGALQLDMTVTIAPIAFGGDVKTKNKKDFEFSATGVKASAYTKPSA
1305264..1305647                   PHAGE_Strept_phiBT1: gp40; BL0380; phage(gi29366760)                                 8e-09               MADKALYVVGQKRFVQTMRKAGADMQELKEVNRRAADIAKPEAVARAPRGKTGRLAGSIRAGATQKAGIIRAGRKTVPYAGPINYGWPARNIRPRTFVNDAVASTESQWAKEYETFVKKTMNQIKGA
1306092..1308143                   PHAGE_Lactoc_jj50: tail tape measure; BL0381; phage(gi115315642)                     8e-46               MSVRITGNSDDAVKALSKVTAKASAFGTFMGGAALKGVSALWDTLKGFTSAVMDMSDSTDKFKNTMNFAGFDTSAVEAATKATREYADKTVYDLTTVQNTTAQLAANGIQDYVGLTEAAGNLNAVAGGNAETFKSVAMVMTQTAGAGKLTTENWNQLTDAIPGAAGKLQEAMLNAGAYTGNFREAMEKGEITADEFNKAIMDLGMTDVAKEAATSTQTMEGALGNLEAAVTGGLTDAFNLFKPAVTSAMTVAADKISAFSGKATTGLQGVIKLVRDGDFSSELREAFNIDEDSPVVDFLLTIRDNAVSAFDTAKQKAGEFVAAFQNTGPMQAAADIFGAVWEACKNLAGAAGDVIGQFTPLADSMGGASGAGQALGDAFNGAADIVGMVSDKLTAFSDWVSEHAEPVASALVGIAAGFAAFKVASAISAVVSALQGFSVATTAASVAQWAMNAAMNANPIAIVITAIAALVAALVYFFTQTETGRQIWASFTSWLGSCVGNIVGFFQALPGKIGGFFQSAAQFATDKWDAVVAWFRGIPGRITGAIGNVGHLLYNAGASIISGFLDGLKSMWDSVTGWISGIGDWITEHKGPPEYDAVMLVNNGRLIMQGFAKGLRSGFDTDVRRTISRINGRMGGLSLDAGMNGGTVGGTVVNVTFNAPVDREGVAREIRKILGDYDRKRGN
1308158..1309666                   hypothetical protein; BL0382                                                         N/A                 MFLDWGDGWKSVNDHAEDVAALAGFSIQWGTDDLAEQPEPSVMSFTLRDRTGWLTGRALTLAGARVLVQISEQPTWGMLRDDMGPWSAQHMRVEAMHQAYTPGLPSSTFSTAITLFDGLVQNGGDARPHGDGWLLELSASGRMILWKRLQKQGPTSSDARYAGLHWVAGMSGRVEELNRRAADADAPRVSVSGLTSTDSMAAYKTDDYPSQLDLLHRTFAHESMWPIWYEYPDRAVSRLDYMPFGVPVTLGVDTVGRFTVTDWTGETLDGLDAAEIIIDDEQTLTIPEPVTQFVIQGKTAKASDGVLEFDQHDTELSDLGTLPANLKTTQSSVTVEADVVSADESGGVWTRAGGTVWTPGDDERAAFSRLLVTVDRRLRPETIVFDSRRLDPATHARLYLTASSGPLVIQGATSSRLAGDDGNPAASGAWASIGGTLTYQWRSGRPLLRNEVTLWPLPVAAAAVATWADMGSWPVTWTQAAFTLAELALIHDYQQQTTMEES
1310172..1310441                   hypothetical protein; BL0383                                                         N/A                 MGAVPQQPHEHVGHDVRGEFLLVRLVGLGERHAGRYRQRSRRVQAPVVDRHAADYRNAAVGVPLRLFREVAAGNGPETAETHGPGWLRP
1310902..1311780                   PHAGE_Lactoc_asccphi28: hypothetical protein ASCCphi28_gp19; BL0384; phage(gi168983493)     3e-06               MVGYAKAVWRGSPNHYQGRNGYKVTHITLHIMVGSLQGTDTVFQRSSYRASSTYGVGTDGTVYQWVDEINGAWCDANMASDCSGISIEHAGGIAGIAPTDAEYEASAQLCADIARRYGWTKLWHDETGNRTGNIVLHREVPGTDHAGCPDRAVNGLDVARVINRANQILNNQGGTDMSCALMIRDDDTGVVYYWSPETGRIGLGHPDQMKVLEDAGVKLIHSSKKATWAARADQISGYVQAKTTAYEKAQTAALEALAKSVGANPSDITKTVSEAVNAALKNLTVTLTNKEA
1311777..1312040                   PHAGE_Lactoc_bIL309: holin; BL0385; phage(gi13095860)                                3e-07               MMDYGEEQVEGGDPRTPGVSGATIARALVLLLGLINACLVMFGVDTIPIADETVNQLVALVWNVGAALWAWWKDNPITPKSRAQHAA
1312023..1312034                   attR                                                                                 N/A                 GCGCAGCACGCG
complement(1312037..1312867)       PHAGE_Mycoba_BPs: integrase; BL0386; phage(gi189043119)                              5e-54               MSMHKKLPPAQWRDEITLWLESLTAAGLSQDTVNTRRCKIGHAARCLDKSPYDVTSEDLVHWTASQSWKAETRKGYRNTLVGFFRWLHATGRRADDPAAALPKVRKTRPHPRPCPDVHIYAAMCAANDVERLMLRLGAEAGLRLSEIAAVHSRDVLEGDAGPSLIVRGKGDKQRIVPISEDLAKRITAAPGWLFPGRWRGHVEKSYVSRHLTRLLPDGWGPHSLRHRYATRMYETTHDLLLVSKLLGHSSVETTQIYVAMPDSRLRVGLDAVTLAG