gi|42516522|ref|NC_002967.9| Treponema denticola ATCC 35405 chromosome, complete genome. [asmbl_id: NC_002967].2843201, gc%: 37.87% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 1175279..1175294 attL N/A AACTCCCGCATAGCCT complement(1182958..1184901) PHAGE_Salmon_SPN1S: hypothetical protein; TDE1145; phage(gi374531205) 4e-26 MLVTNFAGGEVSKNLYGRIDLPIYQNSVSRLENFDIMQTGGIKRRGGTERIGKLKGYARLIPFIVNNTLSFIFEIGSEYIRIWKNGSLLTLAGFPVEFSPTPDLPLYQKSDLSEIQYAQTYDSLYLAHRHYKPYVIKWQGGDAFTFGSLNITGNAHKLPFQGSDNYPSCVALFQGRLFFASTIREPQKIWASKVFEYENFTYFDTVVSKTTQLKNPDLRVFSAKAVKDSDVLTELTKDFTDITNITDYYVSGHKGIPKDTKVLSVTSDSMKISKPATVDKEDIVLSIHLWRNADSPQADDYKDTEIINNVTAPDHAFYFEIGSDKNDKIKWITPSKDLIIGTESSEWVMSDGVTAQRIEVQLQSRYGVADLQGSLIGRSVIYIGQGGRSLRDYAYDFQEHTYKSIDLTQAASHLLIESKAVDFDYTNSPVQKIYLSLEDGSACVLLYDKNTGIAAWTKIVLGNGKIKNIVTVPGLKGFDDVYFEVERKGIFYLEKITETEKDKTIYLDSFSKYTSETKPDEYELSSVFIPKEKKIFKLEELPDEYKDFSKEMYIGYEYTSTVESLPVINSADNNKKRIAALLIRFLDSYLPLVSQTETREQTIYEDEPFSGVVSVPVEGNFNRDVFFKLEMKRPERCEILAVNANLA complement(1184914..1185504) PHAGE_Salmon_SPN1S: hypothetical protein; TDE1146; phage(gi374531204) 3e-05 MNIDRQLANRALSAVGEPQLNETDKESKSFLLVKKFYLPTMLESLEMIPWTSGKKRARLEKDLSENHTDYSGAFKLPIDCGKIIELKDKSYYIVEGKTLYTDAAEAVLLYITNGKLPEGMGNVDDDFPDYDPPEYEAMFYQAFELRLASKFALELSGKPELHKMLLQEAAMIEEAAYRNTKTLSAGKKKGNSWWFD complement(1185619..1186050) hypothetical protein; TDE1147 N/A MAKKNKTKNEVREELKASNPHFTDEQIDELLEESFDGEDTASDETSGGAETGDAAALRAELEAERAELEKEKEALALERAELEKEKAKLDKELTSLNETLDTAITGEEKEYVCNTACTFDGAYYKAGDILVTSKETSEFFDPV complement(1186064..1186447) PHAGE_Salmon_SPN1S: hypothetical protein; TDE1148; phage(gi374531201) 3e-06 MINLYLDKRLELSSDQAITTTAESQNAIDFGTDSCSADGKRIDFRIKEKFQGGTSLKFILQDSANGTSFDDKLTSTTFNTAVLVESQKEPFYSLVIPKGLRRYIRVKYDVQGTFTKGKIHAILNTEM complement(1186516..1187478) PHAGE_Entero_phiV10: hypothetical protein PhiV10p10; TDE1149; phage(gi89152431) 6e-41 MPNLSMTDSMTALEVMRRANNQDGFHIVELMAQTNEILKDMPMIEANDGTIHNTLVRTSLRSGTHRKYNEGIAPGATTTDTIRDRITMLEDYSIVDKDLADHSGNVKALRASEADAFLQGMGQTQAEELIYGDHGRNEAEINGLAVRLNKLTNKNVINAGGSGNKCTSIYVCAIGNRFAHLIYPRGRKDCGIKTEDMGLQNWPMEQGKVMPAYVQFFSTHYGLSIAHPDAVKRICNIDNTVPGDKIVEMILEAMLRLPQGAQGVSIYCNQDILVKIDKAAWSKGNAVFTKEDPWGDMITHIRSGRCRRVDAILSTEQALV complement(1187491..1188333) PHAGE_Salmon_SPN1S: putative endoprotease; TDE1150; phage(gi374531199) 4e-06 MGELDQNNGNQTPQGNGSGETQATGTSVLDAFKGAGTGSNQNPATKGDENAKGGQANKEAETYALKAWGAQLSKELKENEEAVKVLSKFEDISGLANSYIELEKKQGSMHTIPGEKATQEELDAFYKRLGKPEAADKYSFDQKYEAEKRFAEAAFKANLSDKQAKELYDFFLNIGQSQQAQYKEIIVKKAQETDALLQKEYGNLFEQKIGNYTKALKLLGGGEVMKQLEETGLAYDPGFVKLMINAGEALGESKAVIGNGTTPNGIKSAREGGTFSFFNE complement(1188358..1188624) hypothetical protein; TDE1151 N/A MSKCVIPGYETSSPDEQIEALRKTFKRVFKTEDGKIIFNALLNDLFYFTEAKTEAEKALCEYAKFFLRERLGIIKTLNITNSLIDNLD complement(1188617..1190299) PHAGE_Salmon_SPN1S: phage head-tail connector protein; TDE1152; phage(gi374531197) 2e-58 METKKDSKELLDDIKGLFDILKDKRSMHEAEWQDVCTYIGSNVFDWSENKEEIKRPKRHTGRPSEYLKKLVSGLMGYTISPNVTWLKLSLNNTEMLEYAGVKDWLEQSEKALYEEFNRNNLYSQVSLFISNAASFGHGVMLIDEKKENSIRFLTIAEPEIYIAENEYGDIDTVFRYFSMTVKNIIARFGEENVSEQIKNDAKDIKGKNKEIKILHAVLPRDDYDESKLDGKNMEFASYYIDMDNNTILEESGYYELPYSVFIWEKETSSAYGGSPAREAIPDMRLLNKVEEARLKLAQLVSEPPMNVPDSMRGFESVVPAGYNYYERPDMIMTPINIGANFPITLETIQDIESRLRDKFHVDFMLMLQAQTAQKTATEVIELQGEKSALLSSLIVNQNKALSEIVIRTLNIMYRQGRFPEPPNILNGSDAVLNVDFVGPLAQAQKRYHQTGGVQTSLAISQPIIQMNPEVLDYIDTDKLLKNVLDTNGFPQSAIREDDEVEKIRQQRAEAQMQAMQAQMQMQAQSNITNNFDKLNEPVKEGSPIQELSEQLTGGLGGDNE complement(1190352..1190948) PHAGE_Bacill_phBC6A51: hypothetical protein BC1875; TDE1153; phage(gi31415769) 9e-33 MSKLFPDHIIFYIKENVKGKSTAELTELVNQVFATNYTEAQIRTCKHNRHIKSGLTGHFPKGHTPYNKGRKGYYSPGCEKGWFKKGNIPKNHRPVGSERIDTNGYVYIKIKEPNVWCLKHVRIYEKKHGSVPKGMIVTFKDGNKQNCSIENLLLMSRAEAAVMTHFKLRGNTPELMETGVLVSKIILQKSKLKKKQKK complement(1190941..1191186) PHAGE_Staphy_vB_SepiS_phiIPLA5: hypothetical protein; TDE1154; phage(gi399528947) 2e-13 MKNKLTDLNNHLFEQIERLMDDEVMEKNADLEIKKADAVVKVAEAIIKNANLSLQAYKYADEWKTGNAKVPEMLRIGVGNE complement(1191246..1191545) PHAGE_Synech_S_CRM01: hypothetical protein; TDE1155; phage(gi333798317) 5e-11 MSNETDTRNKINEIMEAMEDLLLYKNRLYGNSALNPKQIFYKGDAVNSILIRLDDKLGRIMANTDEKPRINDVADIIGYCTLLLISMGVDKADIDNLRD complement(1191711..1192025) hypothetical protein; TDE1156 N/A MALAEITEQEKEIPEGLILTGFVKMKPDVKSEAACVLDNFLESLDWNFSYYDDIATEPTERMKKAALRFVKEVLKDYEVSVYEQVCIKKINVKRWLKKNSDWYK complement(1192130..1193383) PHAGE_Pseudo_MP1412: terminase, large subunit; TDE1157; phage(gi399529013) 2e-53 MDFLAGCNKHRENWRGILFRRTYKELEDIIVRAKELYIPMGAVYKKTDNIFNFPTGSFLRLRYLERDDDVSNYQGHQYTWIGFDELGNYSSDYCWRYMMSRCRSAKGIPCYMRGTGNPGGVGHGWLKKRFIDNQNPNTIYTDEDGNTRCFIPSRLDDNDYLIKNDKGYEKRLRLLPKYLYEALRKGNWDIIAGSAFEEFSRESHVIKPIALDPGVWFKFCSMDWGYSRPFSIGWWAVSRDGRMIRYRELYGCENGEANKGVRRSASSIAKEAYALSIAEGVNTMVADPAVWGKTDDGPTIADKFEVEGWKLIKADNDRINGKMQFHQLLKSKGEDGKPMLLVFDTCFDFIRTIPLLLPSTTRPEDIDTTLEDHIYDETRYAIMSEYARHPGRALEKQNGQWNFKNKRTRGASFDPYG complement(1193503..1194114) PHAGE_Staphy_SpaA1: phage terminase, small subunit; TDE1158; phage(gi399498865) 3e-06 MAKIAKAKDESKAKIKPKVEDWAEELNEQQRLFVLYYCTDEWCFLNGTLAYRKAYPKCKSDEAAATGASKLLRIAKVKKSARSLLKLTRELDDELTAYKILKTYEHLAFYNPADIITNTGELLKPLKELGPLAICVEQIQTFYTKDGAPCTVVKLANRHKALTVLMKYLSLVKPEINMEAMMPVAMISDKTSIAEWQTETKTS complement(1194118..1194510) hypothetical protein; TDE1159 N/A MIFFESLGLVEFFIEIEKYYGEYEENIRIVVFSFIKKLNDWERAALYNELIEHYSRGFSPPDVYRFNLHLKKAKEAAKRLKPSMVLSKKEENKEDIQKNLAEAAKEYGLDPNGKDLLKKMFACEIKKRKG complement(1194507..1195931) PHAGE_Atelin_3: orf 48; TDE1160; phage(gi9631239) 7e-10 MADGKTLTWRKFPRDTITNPALLFIAKKLPKERQHQVFTLFVALYCNADDDGVVDLSDLAVFSYTCIMSEDDLVDLLYRFLDRHIIEEITISGVPAYRIAGWLDPYPGRMTAAEKQAAYRSRIAEKKQPEKRSFLGSKGRQAPPAENPIDTPKPDVSDDTDAVYDEAGELSDDEILALFLRLEKEDEMEAPIKIVEPPESAAAETPKSVTERYPDVTGVTGEKNEVTAENCSVTQRYPTPLKTEETDRRDRERQTEGEEIETEEREMRDRETERETDRGEIDIEDTEQKKRKGRKRKDKTHTDRAENPARAPTGEILKEREAEEKETEEPPEREREPAPELAAVAEDTKKTKREAERRRACFKILWTFFNDKNPMGFVDEEAELLACAELAKMIVKLEDEKNTAEIIACQFTNSFNRLLNKGGYFENMPCTPIMLLKPGNYSKVFYSVSKILHPKDQGGMHWAAELKKVMDNEL complement(1195910..1196131) hypothetical protein; TDE1161 N/A MGEPFMITNLFIIISGARIFLLQKILELLPELVKARYKEFLQLYHSPILFTKRVTENTHYLKTRIYKWQTAKL complement(1196146..1197774) PHAGE_Clostr_st: putative ParB protein; TDE1162; phage(gi80159871) 2e-07 MAERKTILVSEVLPNLDRKMGGYGNIDTLAASIKEIGLINPITVRYESGDNEFPYTIIAGRRRLEAVKTLGLKEIEAVVYAEDELIPNEEIALAENVNRLDMHPVDEGANFKKLLKEGKTIDELSKTFDRSPSHIYQRIKLTELTDNMKEFFKKGSINISQAARIACLPTEVQENIYNAISKDTWFDGNADYAIRRYAKNRLDFPCTLCKNCTKRTRYTDNNLFPELNDRDDYCLDHECYEQEIVKHYREKIEKGVSNYSDLDFLFVNGIKEEFLMSLQKFFDFKIDLCSFMDYTQLDQRVDVCTLFDEVRKCIIPWYDVIDDKIKFVMKDEDYNKYFKTKREITDEEKLIIEALPDEYKEEAKKTADKQNLFNYSMERQAKTNTVCTLLKKEFLKPNPTFYLSDNFFDCIFRSSNKDFICDAFKIMTGANLTNLKDTKRFNFKHIDFLNLFFYAFILRILDSNIYEGLDTVIKLLGLDIKEAKKIFNEELKNLVIKDLKKAPDEESDDESEYELEETEDEDITDDSFRSEKNEDGEKVCYI complement(1197790..1198020) hypothetical protein; TDE1163 N/A MKTIYTVESELLSQRITITETDGKYEIDTEDGVHYSDKEVFLCCFADPRPKFPKRVHRIKKLFDGEVLGIEYLKDH complement(1198023..1198256) hypothetical protein; TDE1164 N/A MKTKSADVSSQWNEKRKTVLGLTLTFPSSEEKQKALEFLNSGGRKPAAFMLYLLDKEMERAGLKKMVVGKPADSYRL complement(1198271..1198480) hypothetical protein; TDE1165 N/A MKTGSNFYATMNEMLDNLNSNIIELKRAYESRNPIKTHTEKLYGLINRNINEARNLLKEDLSLELNKNF complement(1198484..1198807) hypothetical protein; TDE1166 N/A MKRQINYYRKQVDYKNIHTHGEIMEAVIFNTPELTYKYHIFILHNGKQTEKLYRRSLSGAKKSAYKQLQIPQKNGQAMLIEKAKPVFIRIDGRKVEVPEYMEIPIRG complement(1198804..1199028) hypothetical protein; TDE1167 N/A MKITKNTLIQINSSRHPTFNAIAVKDFDTNDEWYPVSLTDDYLEGMSKYWLKGEEVPCRKSLVRSFKIITEAKK complement(1199039..1199572) hypothetical protein; TDE1168 N/A MKFDVDLYKVKALEHCEDPKEEHILCGFYYEVAGVDFLDVGNEGFTERLECPINTYPIRPYTVCRNTGVKINGEYLYEFDLVIFGNDDRMGIIVWNEFVMSYVINPSNNYSSFLRLKGPDSHIKKIIGNYMLSDADSKKFQKYSDDLDAKYRGPEPTVECRSQQHINREIKRFLPKN complement(1199569..1199814) phage DNA-binding protein excisionase; TDE1169 N/A MIMNMKQVMELTGYTQSYIYNLVHKKMIPVYKPNGGRLFFVKEEIEQWLLGGRQMTSEEMHKEADKMLLDMAARRSKRRTK 1199940..1200302 DNA-binding protein; TDE1170 N/A MAFRENVKKLMDKHGLIAKELALRAKISVNTLNMYLGYKESLPNVDIGVKIAKALDTTVEYLVTGIESSSGIVIAPEDIELIKKIHLLDDIDKKVVEDLIQSFIDRKRSEVSAMETSRIG 1200315..1201118 PHAGE_Acanth_mimivirus: putative sel1-like repeat-containing protein; TDE1171; phage(gi311977376) 1e-25 MKKIFFCLILFMIALLCFADKKFEKVKAAAEQGDAFAQFNLAAMYDKGDESLVDKKQAVYWYTKAAEQGYDVAQLFLAFMYDIGDGIPIDKKQAFYWYTKAAEQGNVAAQCILGLMYSNGDGTPVDKKQAFYWFKKAAEQGYAKAQFNLGGMYYKGNGILTDKKQAFYWFKKAAEQGYAEAQFNLALMYYNGDGILADKKQAFYWYTKSAEKGLAFAQFNLGLMYSNGDGILADKKQAAYWIKQAYENGYEPAKELWDADELWKYQD 1201146..1201340 hypothetical protein; TDE1172 N/A MRYKMRYFLAVLLCIVLYFVIFGGLGVILDMPLYNLGAMFYLLNIGYIGLCVFLWKKITKKNDK complement(1201347..1202411) PHAGE_Lactob_JCL1032: integrase; TDE1173; phage(gi418489141) 1e-13 MSVKLWINRNKIYLSIYISGKRWRESTGLTVTTDKAQNKVVMDMAEVLRSKREVSLIAVSNGLSDPALTKITVLEYVKNAAAEKNKKHPLHKVVLWIEKISPTLKMDALTPTWFENFQQTLQRETELSPYTCENYACSLRTLFKKAVRDGVLVKDPTIGVKHIHCPESIKEFLMPEDIRKLAAEPIGGILGADVKKAFLFACCTGLRISDLKSLKWGGVSFEKKTLTKIQQKTKRAVYLPIKDEAIAFLHLLAEENPNRTDEDFIFPHVATTGTNMNQYLIEWGKRAGVRQKIGWHLARHTHATLLLESGADLYTVQKLLGHTKISTTAQYTQVTDRKKKEAIDLLPDYGIVGD 1214754..1214769 attR N/A AACTCCCGCATAGCCT