gi|339277069|ref|FR875178.1| Streptococcus thermophilus JIM 8232 complete genome. [asmbl_id: NC_000000].1929905, gc%: 38.92% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 32542..32787 PHAGE_Pseudo_Lu11: hypothetical protein; STH8232_0047; phage(gi388685003) 1e-05 MSRVEILQEMQLVIQEQLDREDIVLTEATKLNDLGVDSIELMEFIINLEDEFSLEISDNTIDHMDKVSDLLDYLSEQLNNK 33072..33779 PHAGE_Prochl_Syn1: phosphoribosylaminoimidazole-succinocarboxamide synthase; STH8232_0048; phage(gi326784002) 6e-43 MSNQLIYTGKAKDIYSTEDENVIKSVYKDQATMLNGARKETIKGKGVLNNQISSLIFEKLNASGVATHFIERISDTEQLNKKVTIIPLEVVLRNVTAGSFSKRFGVEEGLDLKTPIVEFYYKNDDLDDPFINDEHVKFLNIANDEQIAYIKDETRRINELLKDWFEQIGLRLIDFKLEFGFDKDGKIILADEFSPDNCRLWDAEGHHMDKDVFRRDLGSLTDVYEVVLEKLQGLK 33835..37560 PHAGE_Microb_Min1: putative phosphoribosyl formylglycinamidine (FGAM) synthase II; STH8232_0049; phage(gi149882852) 6e-41 MDKRIFVEKKADFRVKSRSLLKELQHNIQLKTLNDLRIVQVYDVFNLAEDLFARAEKYIFSEQVTDTVLDEATVKTDLEKYAFFAIESLPGQFDQRAASSQEALLLLGSSSDVTVNTAQLYLVNKDIAANELEAVKNYLLNPVDSRFKDITVGIAKQDFSESDKTIPNLDFFETYTAEDFAQYKADQGLAMEVDDLLFIQDYFKSIGRVPTETELKVLDTYWSDHCRHTTFETELKNIDFSASKFQKQLQATYDKYIAMRDELGRAEKPQTLMDMATIFGRYERANGRLDDMEVSDEINACSVEIEVDVNGVKEPWLLMFKNETHNHPTEIEPFGGAATCIGGAIRDPLSGRSYVYQAMRISGAGDITTPIAETRAGKLPQQVISKKAAHGYSSYGNQIGLATTYVREYFHPGFVAKRMELGAVVGAAPKENVVREKPEAGDVVILLGGKTGRDGIGGATGSSKVQTVESVETAGAEVQKGNAIEERKIQRLFRNGEVTRLIKKSNDFGAGGVCVAIGELADGLEIDLDKVPLKYQGLNGTEIAISESQERMAVVVRPEDVDIFVAECNKENIDAVVVATVTEKPNLVMHWNGKTIVDLERRFLDTNGVRTVVDVKVVDKDVKLPEERKTSAETLEADTLEVLADLNHASQKGLQTMFDSSVGRSTVNHPLGGRYQITPTEASVQKLPVQYGVTTTASVIAQGFNPYIAEWSPYHGAAYAVIEATARLVAVGANWSKARFSYQEYFERMDKKAERFGKPVSALLGSIEAQIQLGLPSIGGKDSMSGTFEELTVPPTLVAFGVTTADSRKVLSPEFKAAGENIYYIPGQALAQEIDFDLIKSNFAQFEAIQADHKVTAASAVKYGGVIEALALATFGNHIGATVTLENLETALTAQLGGFIFTSPEEIASVGKIGQTVADFTLAVNGVTLDGYKLDSAFQGKLEEVYPTEFAQATELEEVPAVTSDTVIKAKEVVEKPVVYIPVFPGTNSEYDSAKAFEKEGAKVNLVPFVTLNEEAIVKSVDTMVDNIEKANIIFLAGGFSAADEPDGAAKFIVNILLNEKVRAAIDSFIERGGLIIGICNGFQALVKSGLLPYGNFEDASSTSPTLFYNDANQHVAKMVETRIANTNSPWLAGVKVGDIHTIPVSHGEGKFVVTTEEFAELRDNGQIFSQYVDFEGKPSMDSKYNPNGSVNAIEGITSKNGQIIGKMGHSERFEDGLFKNIPGNKEQHLFASAVKYFTGK 37729..39168 PHAGE_Parame_FR483: hypothetical protein FR483_N035R; STH8232_0050; phage(gi155370133) 1e-22 MTYEVKSLNEECGVFGIWGHPDAAKLTYFGLYSLQHRGQEGAGILSNDAGQLKRHRDMGLLSEVFRDPANLDKLTGKAAIGHVRYATAGEASVDNIQPFMFKFHDGQLGLAHNGNLTNAVSLRRELEKNGAIFSSTSDSEILAHLIRRSHNPSFMGKVKEALNTVKGGFAYLLMIEDKLIAALDPNGFRPLSIGKMANGAIVVSSETCAFEVVGAEWIRDVNPGEVVIIDDNGITYDNYTTDTQLAVCSMEYIYFARPDSNIRGVNVHTARKRMGAQLAREFKHEADIVVGVPNSSLSAAMGFAEESGLPNEMGLIKNQYTQRTFIQPTQELREQGVRMKLSAVSGVVKGKRVVMIDDSIVRGTTSRRIVQLLKEAGATEVHVAIGSPALAYPCFYGIDIQTRKELIAANHTVEEIREIIGADSLTYLSIDGLIDSIGIDTDEPNGGLCVDYFTGKYSTPLYDYEKSYLESLEEHTSFY 39199..40218 PHAGE_Synech_S_SKS1: glycinamide ribonucleotide formyltransferase; STH8232_0051; phage(gi472340860) 4e-64 MSKNAYAQSGVDVEAGYEVVERIKKHVARTERAGVMGGLGGFGGMFDLSKTGVKEPVLISGTDGVGTKLMLAIKYDKHDTIGQDCVAMCVNDIIAAGAEPLYFLDYVATGKNEPAKLEQVVAGVAEGCVQSGVALIGGETAEMPGMYGEDDYDLAGFAVGVAEKSQIIDGSKVAEGDVLLGLASSGIHSNGYSLVRRVFADYTGEEVLPELEGQKLKDVLLEPTRIYVKAALPLIKEELVNGIAHITGGGFIENVPRMFSDDLAAEIDESKVPVLPIFKALEKYGEIKHEEMFEIFNMGIGLMFAVKPENVERVKELLDEPVYEIGRIVKKDGASVVIK 40218..40772 PHAGE_Synech_S_SKS1: cyanobacterial phosphoribosylglycinamide formyltransferase; STH8232_0052; phage(gi472340960) 6e-27 MAKRIAVFASGNGSNFQVIAEQFPVEFVFSDHRDAYVLERAKNLGVASHAFELKEFDNKEAYEEAIVKLLDEHQIDLVCLAGYMKIVGPTLLAAYEGRIINIHPAYLPEFPGAHGIEDAWNAGVDQSGVTIHWVDSGVDTGKVIKQVRVPRLEGDTLDTFETRIHETEYKLYPEVLDSLGVARK 40841..42388 PHAGE_Prochl_P_SSM2: 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase; STH8232_0053; phage(gi61806062) 7e-76 MTKRALISVSDKAGIVEFAQELKKLGWDIISTGGTKVTLDNAGVDTIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDLHSHLQAAKDNNIELIDLVVVNLYPFKETILKPDVTYADAVENIDIGGPSMLRSAAKNHASVTVVVDPADYAVVLDELSANGETTYETRQRLAAKVYRHTASYDALIAEYFTAQVGETKPEKLTLTYDLKQPMRYGENPQQDADFYQKGLPTAYSIASAKQLNGKELSFNNIRDADAAIRIIRDFKDRPTVVALKHMNPCGIGQADDIETAWDYAYEADPVSIFGGIVVLNREVDAATAKKMHGVFLEIIIAPSYTDEALEILTTKKKNLRILELPFDAQDASEAEAEYTGVVGGLLVQNQDVVKESPADWQVVTKRQPTDTEVTALEFAWKAVKYVKSNGIIVTNDHMTLGVGPGQTNRVASVRIAIDQAKGRLDGAVLASDAFFPFADNVEEIAKAGIKAIIQPGGSVRDQESIEAADKYGLTMIFTGVRHFRH 42560..43078 PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; STH8232_0054; phage(gi17546156) 6e-10 MKLTYEDKVQIYELRKHGQTFNQLSKRFGVDASGLRYMTRLIERYGIEIIKKGKHRYDSPDLKQEMIDKVLLEGRSQKSVSLDYCLSSGGMLPNWIAQYKKNGYTLLEKRGGRVPKMGRKPKKKPEEMTELERLQAENEYLRAENAILKKLRELRLRDEKEQEEKQKLFKDW 43072..43425 PROPHAGE_Escher_MG1655: IS150 transposase B; STH8232_0055; phage(gi16131429) 1e-21 MVTEFPLDILLNIIKLARSTYYYHLKKLNQVDKNQSIKVEIQAIYDEHKGNYGYRRITFELRNRGFVVNQKKVQRLMKLLGSSSQIRRKRKYSSYQGEVGKKADNLSDQGWQYQHQY 43462..43680 PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; STH8232_0056; phage(gi17546155) 3e-17 MSRKGNSPDNGMMESFFGILKSEIFYGYEKTFNSLEQLEQTIVDYIDYYNNKRIKVKLKGLSPVQYRTKSFG complement(43785..44624) PHAGE_Strept_M102: hypothetical protein M102_gp12; STH8232_0057; phage(gi242345583) 7e-12 MKKKLLNYLILLACLATVSVSCSGSAQAAVLGDDYPFSWKYGGFGVDPWTMYWRQCTSFAAYRLSNTNGFTLPIGYGNAITWGNIARANGYRVDMNPAVGSIAWFSAGVNGAGHMGHVAWVAEVHGDQVTIEEYNYDAGQGPEKYHKRSFHKSQVSGYIHFKDLESGTQNRNPTNSSIKVGDSVRFTGTFRVTSVSGNTITSQDLAGGTPTKHNIVDPSPVLEVDAQGNPTSDQYLNPGETFTIPGNFKVLAIDPPSDGILVQIGNLKTWVTQSVLEKI #### region 2 #### 136098..136109 attL N/A GAGTATGAAAAA 137248..137622 PROPHAGE_Escher_CFT073: transposase; STH8232_0168; phage(gi26246249) 5e-09 MTQFTKELLNFLAQKQDIDEFFRTSLETAMNDLLQAELSAFLGYEPYDKLGYNSGNSRNGSYARKFETKYGTVQLSIPRDRNGNFSPALLPAYGRRDDHLEEMVIKLYQTGVTTREISDIIERM 137923..138423 PROPHAGE_Escher_CFT073: transposase; STH8232_0169; phage(gi26246249) 1e-20 MTDGFKGLEEIINQAYPLAKQQRCLIHISRNLASKVKRADRAVILEQFKTIYRAESLEMAVQALESFIAEWKPKYRKVMESLENTDNLLTFYQFPYQIWHSIYSTNLIESLNKEIKRQTKKKVLFPNEEALERYLVTLFEDYNFKQNQRIHKGFGQCADTLESLFD 138461..139363 hypothetical protein; STH8232_0170 N/A MTVSIKQDDYLILYENEDLEEARNKIYTDCIMLLWNAFTGLNITGSFKVWLFQKIRSKELTKLMYGTIGCQLEEVSYCNEFAREVDDGYKFLRNYLIYDGSFDLVQMFVLKNETLFVLAKVFVESLESQGKTFEEWFEETVNRLKQCGQEGLFRHPCSTICTSLNKRNHDNSLDYLEAFYKQLKNLINEKSSPIGADALSPDKRCLADIGEEGVRDNLQRGYLLLNNILKQIYKEQQGTIALYWIKDYLGKGEKVFKDVLCNHCTMEFNKKYNSSGYDFEIINEIRRLHNKVSAFRNKWS 139389..142256 PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; STH8232_0171; phage(gi9631364) 1e-10 MIVITSLVENLLTEMLGNYFKGILGKIKLKCFTKRLKDEIGDSILKQYGKKEYYLDFDRFLIEQNVLDKIIKNFLNQDILQSKTVNQSVDYYLNLFIEDYPKYKLYKNDFKQIIQKYFEIIFKQLNKLDTHESQALSRIIKEISNGLDQQLQYLKLIVDDNNAMLKQVVNGNFRIHPYIETLLATSGESFVQSDYFERYLFQDTEGSKEKDSLDILLQYHKVVLAGEAGSGKTFETFKLINQLCTKYSNYQLIPIYIPLMEYEDSLGTLFEIIQSKMEPFCEGNSKEAINQLFVNNQLALFFDGIDDIIDERKRLKFFSEANLLMAQYNQNFFFFTTRKNRYQHELGEEKSFFLTNLSESIIQSDLIRLGWYSNLPKAYLELFRNPLLYKIGKTILANRKNKELFNRTQIFTQYFEKNYRYKNSYSELSLHETLNLFGKFSYEHFDQSSFTYSEVDKIISAYPVSTQNKRNIIDYFINFGIFSTSDRITFSHKLFKEFCAAYYITNSLTVSSDTELLEKLIYNEEWREVVIFISGLFSTIEEQDKFLDFILQHNLPLYIECVNSKNDLLRNNGKTDVSIDSSMERILSEIHKTYTFIVENYFRPISEKFEPFITESQKSGYKIGITGGIIKNSLYYWFDIVDKGTPNAKIVSPNLLGQVSQEYQATIFLKTTRMVQHSTNLELSGLVGDSGRKIALDLIKSNLKDILENKSLVSSNYILCELLKEIKNKLPWLKEIDDISLMSIEVRKKIDEILKNFPEVTTSEGIELFSLNNLLDILLNSGINYKSSIIPGRDKEYSEAGGLMLNLYSTKRKMEIVETFFNFAEASYLEMVKYNFPNIYRCFSKFQDMPYKLLITYRDDERNPWIDYYHVASAEDENLVEVSQSDVSKDCEEIYKEVLQSYHSLDRTPKTVSIRGCAFLTLLSSRRLGLGENTPLSDFVYKEIKSSLEEILGKI 142867..143871 PHAGE_Burkho_KS5: ISBmu23 transposase; STH8232_0173; phage(gi327198044) 2e-24 MHLFTDDEKILSKLTEKGNPLERLDAVMDWQLFLPLLSELFSRKNKVIGRGGRPHLDYLMMFKVLLLQRLHNLSDDAMEYQLLDRLSFRRFVGCHEDNVPDSKTIWLYRDRLTQSGREKELFDLFYTQLSDEGLIAHTGQIVDASFVECPKQRNSREENEKIKAHETVEGWNKAKRCQKDIDGSWTQKGGVRYFGYKNHVCVDRKSKLIKDYGVTTASIHDSNVLASLCDANEPVFDDSAYVGKSVPDNCQHHTVRRAFRNKPLTDTDKNINRHIAKVRCRVEHVFGFIENSMKGSTFRGIGMDRAKTNVTLTNLLYNIFRFEQIKRLGLKSWA complement(143984..144697) PROPHAGE_Oceano_HTE831: integrase; STH8232_0174; phage(gi23097608) 3e-11 MLILFSIGLRNSEYIPSNKLRKTISRIKANKKILLKESKREEDLSLDKEELKLWLQAFDIDLEKGLIDLKDYTLFYTTFFLSDRKSESYALQWKHINFSTGETLIEQALDRFGNIKPTKGRKKTLFKTPIELIELLANWKARQQEELKLFGLRQTQKQFVFTYNDRSHNINLPLHVDYLNYRMKSVRRRHLELAPASPHKLIHTGVTLAKQAGYSLEAISEALTHSDKQITKTYGNL complement(144642..145148) site-specific recombinase, phage integrase family (fragment); STH8232_0175 N/A MSIKKTKNGTYQLRLYIPEDVQAKLGLGKLFKRKYKTRREAKEVELKLSIDIKNAKSGKSHINIKNKGEIIFKKFYEDIWLEPYKAGQTTTTIKPPTKATVFQTENIFRLHILPILGKYSIEYPNNNKQLILSLLTPKANSYANFKVIRSYVNSVFDWAEELRIYSIK complement(145159..145431) helix-turN-helix, Fis-type:excisionase/Xis,DNA-binding; STH8232_0176 N/A MLVQLPEEQTQEIQQMIATLIKSEIHHFKEDIGADSTCLNKKQTCNYLGISNNTLDIGIAMGLPYIRIGKSIRFNKKSINQWMTRLEISA complement(145656..146687) hypothetical protein; STH8232_0177 N/A MIKESFPFDILNLFDTKGTPPFNFSNQYLNPNTKILDFNNATLYEVDFDSLSPDTKAKLQEGAYKIGESRKVEGNLRAVIVDTTDQKNRVEDLTLRKMTNNNENQVPSDLIAQAQLKQIYNLLLDIKENQDYQIRWERNNSILAPFYSARTKVIEANNSKDFREKVKSLKDANTLFEESVSAIKSDIISNRDEIIKKISQPTYRQASLQTHADFLLQDIEIMTKIVGMQIYIDLTLNNEGIAHDRLLSFQGSMELVSKQNIPYKTNYLKELAKKLLYVKELKWIKNNSIPKVSLLELIHNHYSYSKNNRDLFININTKLIEFHQDSNVNLSNTETAKIETEKK complement(146717..146833) hypothetical protein; STH8232_0178 N/A MNEVAKSEKQKEESIKKTYNLLIYLKMRQISKQQISLK complement(146934..147428) PHAGE_Staphy_GH15: putative tail lysin; STH8232_0179; phage(gi418488020) 1e-10 MQKLDTYIDEHGGTPKAPEQTKGKTRDGGGVTTGDVPQGYSLTKEINTSSHTGLSYPWGQCTWFVYNRGKEVGVSFGKYMGNGGQWMNAPGYQTTHTPTEHSALSFSPGQAGADPTYGHIAFVEQVKSDGSILISESNIKGLGVVSYRTFDAETAKQITYVIGH complement(147699..148379) PROPHAGE_Brucel_1330: transposase, putative; STH8232_0180; phage(gi23502708) 6e-34 MNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDEIYIKIKGKWHYLYRAIDADGLTLGIWLRKKRDTQTAYAFLERLVKQFDEPKVVVTDKAPSITSAFKKLREYGFYQGTEHCTIKYLNNLIEQDHRPVKRHNKFYRSLRIASTTIKGMEAIRGLYKKTRKEGTLFGFSVSTEIKVLMGITA 148514..148525 attR N/A GAGTATGAAAAA