gi|332672788|ref|CP002605.1|  Helicobacter pylori 83, complete genome. [asmbl_id: NC_000000].1617426, gc%: 38.72%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
78964..78975                       attL                                                                                 N/A                 AAAGATAAAATC
79123..80088                       integrase/recombinase; HMPREF0462_0080                                               N/A                 MLNNKLTKSQRELFDNLKAFLYTNVKNFTPIQDVNDMALILNTQDKILKCHNIEQLKQLCHILYNQGIKHTVMMQGLFLFFDYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKYVMYLRQFFDYLDRKKHYSFDFVLKNLAFAKTKESLPRHLNYKDLKAFLKTLLEYSPATSFEKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPSLNAWLSDDYRLKYFNGVYLFKKDKQKAQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLFRHSFATLIYQETQDLVLTSRAL
complement(80504..81481)           conserved hypothetical protein; HMPREF0462_0081                                      N/A                 MPTIDFTFCEINPKKGFGGVNGNKISLLYNNELYMVKFPPKPSTHKEMSYTNGCFSEYVACHIVNSLGLKVQETLLGTYKNKIVVACKDFTTHQYELVDFLSLKNTMIELEKSGKDTNLNDVLYAIDNQHFIEPKVLKCFFWDMFVADTLLGNFDRHNGNWGFLRASNSKEYQIAPIFDCGSCLYPQADDVVCQKVLSNIDELNARIYNFPQSILKDDNDKKINYYDFLTQTNNKDCLDALLRIYPHIDMNKIHSIIDNTPFMSEIHKEFLHTMLDERKSKIIDVAHTRAIELSLQHKQAHSNPYDNTDNLDNSNECTPTPKRRR
81671..82441                       conserved hypothetical protein; HMPREF0462_0082                                      N/A                 MMSEIIKFQSKGIKMIRLKDLNKILRIGLLAGALLGIATPLMAKPLFTDTELAKRISVYNKVLNNEDILACNRSVDSTKYFSAGWDYKQKIPSEWKKEFQQCVLDKVQQKIDTKIKATEKERKEKIAKENKEIMQKAKENAKKVMEKFIAFEIKEKSNYVSNEKQLRMIIDRAYETGISRWLDDLHRKYGYKNTEETIEALGFSEYGEEAKIIRYGVENYIEEQEKGLRDNSNHIALLKTQAFNNEENKIAFKYKH
complement(82463..83719)           PHAGE_Glossi_virus: hypothetical protein SGHV062; HMPREF0462_0083; phage(gi168804078)     3e-06               MKGLTMKKLVFSMLLCCKSVFAEGETPLIVNDPELHAGQATVIGKMVDSIKKYEEIISKAQAQINQLQKVNNMINTTNSLISGSAITLANPMQVIQNAQYQIESIRYNYENLKQSIENWNAQNLLRNKYLQQQCPFFNFNKLTNKKIVNLSNLNNAITKTGEQTTRMRDMQNLIQALSSSGYENMQSLVGQLSGRAWGEMLCKEMTRANNNDRIALLKTRGQYKQAFIQQIKQNIAEEQGLNDKAKLLSKRLDALQTNFGVTDPTANHNKQGIPYCRENKETGKCDPIDNVFRTTRLDNDLEQEIQTLTQDLSKAPNKDAQSQAYANFNQRVRLLTVKYLKEITNQMLFLNQTMAMQSEIMADDYFKRYSNGYNTPKSHKYEELEQERINQRERARRYFQNPNVKFDQFGFPIFSIWE
complement(83716..84966)           conserved hypothetical protein; HMPREF0462_0084                                      N/A                 MNFFDVILDMFVEPAQKVAESLAKHASSFFHAQLILNTIISILFMIWAYKRVKEGDMFEFKTAMGVVVFIAFVGFINWGIKNPNDFNTYFINTIFYPSEKLAILIAQSLNDGLEIPTNANLSPSEIFSIGNLASSAYAMIVNLWDNAFNGVTMFNWLTMIPKLIMFFLVVLGELLFLGLLLIIVLLVTAEIFLWSALGLIVLPLGLIPQTKGMLFSYLKKLISLTFYKPCMMLVAFLNYGIIYKVNALMPTKTEIAQGFYGSADKMAKEGHIIDAFGNVLKGDWNSYIAHSSIVGFLTIIALGSVVCFFLIKRVPDFINNIFGTSGGVGAVTEMMQKIGMTIGGAVVGGSMVIVANQMKQAYQNAGGGLAGLQAGAKAFGLGAISGGASAMANHRSVKAGVKHFVASVKNGFDNNR
complement(84963..85616)           conserved hypothetical protein; HMPREF0462_0085                                      N/A                 MGFLLGWFKSFFNQLHNRQQWEYNNYLREESQWQELVRQGRASDDFNSVVVETYTDIIKNYQREKHTPIYNKRVEKTREYRKPKPINKPQESFNIILAFDNDIKCKEYREKCEGILYALTQQFPTIYEPFSKDCNDDLKLVHIIESKTINIRIMAEFLESSLEKLNSNDTPIQEKENIMDKLEQIDNIKPFNERLKGILENAKENLQTQSYTKGRGR
complement(85843..86001)           conserved hypothetical protein; HMPREF0462_0086                                      N/A                 MAYISNLTSLPLHEILLDNGYTYNKNKTSKNNPCLKHENEEGSLVICEAPNR
complement(86011..88080)           PHAGE_Microm_12T: hypothetical protein; HMPREF0462_0087; phage(gi472342674)          2e-18               MQDFINGFLKAWKAWSDDGKDAFLESFLDEVKNSKTDLSNFLGILEQEIKSLSQEGLKDDISSMLEVIESMKNEISHTKDNENVSDFMNVLQNEISQGQNNPNDNPNEFVESLAQAIIETQENANKNDIELTEQKRVLGMIEDEYYEYQQEQHIQMNEDDGIARATDELEQQELESKALQEHEENQIKRAEEISITENENELAKQELEKYALEAENKSLKQYNESQNPDTLYEQQIAQEQSKEEKRSNKQDLELETLRDNNIKKGLDDESLGLLESLQILKNETNEVANYLKANEIDYSRPTDENTTSKIASLALEENNQLNEKETNTQEQAKHTEKEQEKPKIAPNNDIDLKDKYANLHSFFKQTELDIKQKRIKTKLDFKESFLNYAKNHMNEDELKVLLVVSQKKPTKLTKEHINLIKDCLEQAHGNKHMQDKGLQLSVKSILGHELEKEHHEVLKDYLAKSKDSLEPMDNRVYEVMQKHLDKQQEKALKNLDSATQSVGVNAIKEQNKANENVQQETKNSQAQETTSSQAYESVSQSNAQTTTQANESIKPQTNNTETQQENAKESQAIEQNRATQEPHAKEEPKKVSHPDELVYNPKNHAGLKERQENQEKTPSKGNDEPWIEFAKLEQARAKAHYQAMVEKEQAKQQAQQNAKNTNSINTTNKEVEIIDYGYTQNAPAKNRRR
complement(88080..89147)           PHAGE_Yoka_poxvirus: truncated A-type inclusion protein; HMPREF0462_0088; phage(gi345107317)     1e-05               MKTWNEMDIKEQKELFVKFLASEIAQSLDAGLEFKANNRAYNGNVGNAYNGLNALILDAKQHENGYESNVWVGLDDALKLGANPKEVEFIKNNTKSKNNKEGIYDKASIAYIRDYEMRYVKARDEQGNFIPVLDKEGNARRNAKGEIIYENEKVPQRDKLGNIKYTQDGKTPFYEFKKEKIDIEPTLEIKNLYNVNIFQTLDKTKLKELDTKTLRTQYVSKTFSMDNQNLVIYDLSKHLNESQYKKVLDYVEQYGTTHSEKRKQYHISQSYQQENKIENTPNTENNVKENNTKENNNNSEMNMEQFNKMLEMAQSNPQMLAMLQQTLNKGAEQQKHDHYFANDEVAVTQSKGRGR
complement(89148..89312)           conserved hypothetical protein; HMPREF0462_0089                                      N/A                 MTQDFLEFTEGNYPISEEQMLDFMEMGVEPKGKQEVKLELKNSLENEVNKSKEN
89946..90623                       PHAGE_Burkho_KS14: gp40; HMPREF0462_0090; phage(gi327198309)                         2e-11               MTICIANEKGGSGKSTLCLNLAVQLLKDNKEVVVLDTDSQKSMETFTEIRSNNEYKTFSLFNRSSGFSDTLKQMVSKYENILIDTKGEYSKETQKAMLLSDIVLVPTTPSQLDTEVLANMLERIEQLQELNENLRALIIINRMPTIPTLKERKALIDFIKENNPSDKITLLESSLSERIVYKRSVSEGLGVIEYSDKKAINEWSHFYNELKGYLVKREKTCGLKE
90605..91042                       PHAGE_Acanth_mimivirus: putative KilA-N domain-containing protein; HMPREF0462_0091; phage(gi311978293)     9e-05               MRFKRVKKHKNKYKEHTNMDLQQIDELEKKFEQQEEQTNEQESHLKQEISIKEIKTPKKRGRKKSVLDKDKKKSFNIAFSPSVIKELDEFLLEFGSFKETRSAFIEEALIRHLKYRKNTQEQKLLKQLERLQNKEKGNNENNELE
91020..91592                       conserved hypothetical protein; HMPREF0462_0092                                      N/A                 MKTMNLNEFFTNKVIYKDTPLKLKEKLEQEISQASLKKKLVIANALSNMVFAKIDNENAPKILISRFMCKFNPIDYESTIPSDFRPIDEEEYEDDLEWLNEEKEDRLFDYYLFLNGVKESDLIEVVSESIETYDECMIEIAQNILKNKFSYDIDLLQVLIEGYAKEIMEFLNNELTKESFKELLVSKRIN
complement(91714..92514)           conserved hypothetical protein; HMPREF0462_0093                                      N/A                 MDNNKPHYRVSLSEQALNHEKLMRAIVKNLADTPMVLKGGTALYLGYGLNRFSEDLDFDCHKKINLLGRVKSAIPNGIILNDIHIKKDTDSVGRYMVRYATKDNKEEQTLKLEISYRDAPKESEVNVIEGMRIAKIERIIDNKLCACFDGEHTRTKARDLFDLHFLAKHYEEHFNLDLATRLKDFSKDPDKLVSDYLVDVKLDALLNQIMDLEETALELGVMAQLIHKKLEKQSHSLNALQEQQNHNNNDLLDNANENTHTPKRKR
complement(92484..92969)           conserved hypothetical protein; HMPREF0462_0094                                      N/A                 MREFSMLYIPPTSKEVYVSSIVALNIHSPQGTGDWHSSYALMENAFDDIGVYIYGEKQAHNTNKLLGNLGIIDGTARLNKMGYYPKHTPTYIAEHPRACVDCLYVSVLQTGKLGVVMLDEWFPSIEDKESVYALIEVMKPKLNKQERENLDKWITINPIIE
complement(93009..93227)           topoisomerase I; HMPREF0462_0095                                                     N/A                 MGFLLGWFKEHEFFEKNNKKASSSNNNEIRPATPKQINFAEMLAKKHNVKLPKDYKSNIKVCGDFINEYSKK
complement(93294..93740)           PHAGE_Clostr_st: putative transposase; HMPREF0462_0096; phage(gi80159828)            3e-18               MNKDRGMRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNHFMKSVVDEIATQSDFIIIAMESDIDHLHLMVQYIPRMSISSIISRIKQITTYRVWRNKIFIPLLQKHFWKEKTFWTDGFFACSIGEANPETIKSYIENQG
93792..94139                       PHAGE_Lactob_1: transposase; HMPREF0462_0097; phage(gi226377679)                     2e-16               MLNAVKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIKRQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKTLNNLLQSPKT
94214..95074                       PHAGE_Gifsy_1: transposase; HMPREF0462_0098; phage(gi169257226)                      2e-35               MPKDSVIKQAFISCIADQYFCSLSYETKEPIPKPTIIKKAIGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKLKGSNNRKKQAKKVARLHLACKNTREDYLHKISDEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFFTMLEYKAQRKGKTLLSIDKFFPSSQLCSYCGVNTGKKHEGITKFTCPHCKTTHHRDYNASVNIRNYALGMLDERHKIKIDKSRVGIIRTDYAHYTNECIKACGASSNGVISKYGNILDLASYGVMKQEKAQSL
complement(95071..95715)           conserved hypothetical protein; HMPREF0462_0099                                      N/A                 MDLHLKKALFLASLSCLNANESFVDNSDFLAIMPSDKEEENTPQVKLEHKLEQKVAPQNVLKEQEVTPLKSAELLQSQVKREFKEKKKAQKHFKAMQTKNGFFLGSEIAITGTKLTQSLNLISNATDDLITYSHTSSNANFNMGVLMGYQHYFGATKKHGIKFSMHLYGGTPSSITTNIDIYKSKVSSNYTPLNFGLDIKYLFDFLNVSELPNR
complement(95728..97572)           PHAGE_Synech_S_CRM01: collagen triple helix repeat protein; HMPREF0462_0100; phage(gi333798181)     4e-15               MGYTSGYGVTSNNTGSNGTSANGVNGTSGNNGAKGENGSSGANGANGTSGYQGVGSNPFPPIAGSGNGSSGSSNSGYTPFMSGGGGIGGMGGGFIPFPYSPGLQNGSGANGSNGTNGVNGANGTNGVNGANGTSGANGNNSANGGAASTDSHYTNEFCTAPIRNGNTMSLDIVDRNGSCFKMQAFRNDNVCQYSYDFENMKAIKQTQFYFINRENKSVNIGGCVDLYGKQFEFTMYEDANKCKLDTTTNKGYGSGSASFFQTEILFRGLDNLIHVAKSCTDFAGVQEQLVKYDNDPATRTVQRVVNQYYIDPITKQKVFISHNVVSPLKFSYQTYACGKWQFDDAKLEAYRPTQIRIFDTVANQYYNVTGCDYTSDMNKVPKIVQPYTKINVASSVKGEEVGDLDTTDGSNDNLPQYTTFEIQEMSLNSSQWTATSHCRDLWGSWTKTYGYTGYSQGNLRTLAKWVTQYKTINQGTTIEYIRPRNEGDSDAVYDTYKYYYASQAQKTLRRIPLTIYINSLNLSDEYRKNFELTTLSQELNLNNGVKQLINTQDFTNWKANHYRPNGNGNLCMSYSFSPGSPWKSSDKGKYCSWAQTPNANYSCASHNNWIVPNR
103565..103576                     attR                                                                                 N/A                 AAAGATAAAATC