gi|328675182|ref|CP002558.1|  Francisella cf. novicida 3523, complete genome. [asmbl_id: NC_000000].1945310, gc%: 32.32%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1011763..1011809                   attL                                                                                 N/A                 CCTTGACATGGTAGGGGTCACTGGTTCGAATCCAGTTGCGAGTACCA
1011884..1011895                   attL                                                                                 N/A                 ATAACAAAATTT
complement(1021637..1023439)       PHAGE_Stenot_S1: putative major head protein; FN3523_1002; phage(gi213163906)        5e-16               MSITVQQLQNLTRDFKSQILTRDLIIDKSEVKKYDDRTIEFSFSSSKPYERWPDVYEVLLHTEEALDLERLNNNAATLFNHNWNKQIGVVKSAWIDFSAEKGICKVKFSKRSEADEIYQDILDEIIVNVSVGYRVIDAEYSENEKTFYVTKWQPYEVSIVTIPADDSVGIGRISNFNQQKNQQEGENMDPINNQSTEDAIKLERARVSALSTLAKEHSCEQLLEKHIEAGTSENEFRSIVLNTISARNKERLTVMEKSSPNLSSAKSGAIGMSDKEVRQFSILRAIDYLSNPNDITRERAAFEIEASNTAIRTLNKDASFVIPADVLQRDFTTTEGAGIIADNLQPNSFVKMLQNRSVVFALARKLTGLVGNIDIPIQTASSDIFWVGENVAVGDGDYDTTNLRLTPKTCGAKLNITRKLLLNSTPSAEMLVRDDLVTKIALAIDRAGLYGTGGVQPTGIANTTGVGAHAITTNASFADYVTMETLISQNNADVQAMRYLMNPVSRGAAKSTTKNANGDTMIWEANGTINGYGTGVSNQVNANNIFFGDFSQLIFGMWDGLALTTDPYTGLDKGNIRVVAMQDIDVGVAQPESFVVGTIS
complement(1023402..1024823)       PHAGE_Halomo_1: portal protein; FN3523_1003; phage(gi167832349)                      3e-56               MFGFLKKKKSTKQRGYSTRGAHYNSATSQLLANLRISGSNIDDIIESQYMSLVSRARSAYANNDYVKGFISQACINVIGNNGIKIQVKTAKEELNKLVEAKFKKWCKRGNCEVTGIQSFIDIQLMTVKSLLRDGEFFIIKNIIKNQLKLQVIEPTRIDVTYKATLSNNIKVINGIEVDQYGKAIAFYYVTDDNQRKRIPAENIIHGFIQEYVSQKRGISAAATALIRLGLLGEFETAAIDHARQSAKILGFVSKPASDFEPMGTSFDEEEEKATSVDIGEGARLSIVEDGLTMQKIDSQFPSSEYGNFKDAILRAISLSLGYGVNFINMGNNLEKVNYSSARQGLLAERDSWKLLQRLIIDTLIEPVFTAWFEVEYLSGRLGVMTELQYEDILDKVRFQPRSWAWIDPLKDAKGITENINNLTMSLSDAIIEAGRDPDDVFEQIARDNQKLADLNIQKGEANVDNSTTITEFN
complement(1024823..1025089)       hypothetical protein; FN3523_1004                                                    N/A                 MTVEELAALEGEIAFKKQQIELVKTQITKLRSTIVASYSYSGNSAAYISLDQAKKDLSTLQKEVQMLELKKDGINPEQSMFQSFVRFS
complement(1025305..1025637)       PHAGE_Cronob_vB_CsaM_GAP32: hypothetical protein; FN3523_1005; phage(gi414087359)     3e-07               MNQLVVSVNDSNRVVYLGFEYKNIVVPQGFEFNGNSIPRAFNWFLGKYEYLQASCVHDYLYNSRSNKLNISRKQADEIYKKILIELGCPKLKAHICYFFIRFFGSKYYKK
complement(1025612..1026163)       hypothetical protein; FN3523_1006                                                    N/A                 MKYFKDDSNRVFAFSEKDLSLDFVKERISTLDEITEEEKEAIINQPKNPQQIRQSLKEEIRKLREKEILTAEIEYKDKKFKADRGTALEVNAYINAFQRALPLGLRQQTDIVARWRTQDNSYIDLYLEDMISISLLQTQVVATAFAKQEALELQLSTIQDEELLDFDVEEFWSNVDESASSIS
complement(1026177..1027151)       PHAGE_Salmon_S16: long tail fiber proximal subunit; FN3523_1007; phage(gi456351333)     2e-08               MLDKLAFANINGDSIVISDYSVTDSSVNDESTVGNIIHSDSITSTQDDPNNINTIIVKVVIPSSVNSNNTVRKIYLYDQDGDVFGYGLVPPFTLSANNNIEAELNFYITNSNISTVTITTASMTYVTQDMLDDALANDIPNATETIKGIAQIATNADVDAKIDDTKIVTVAKCERAIDNRIATDAEVLSGNVTNKFVTPQTLNNYKSLGQDWQAAELVNTGAVFSDGAPKYRQIGVTYTNTTARSIVISFIATAQSTSNDRNAIISSNIFVDGIVIGADSSYGYFDDGIVSHFSAIVPSGSTYLINCTFGASTINQFIEWSELR
complement(1027191..1027778)       PROPHAGE_Salmon_Ty2: putative phage tail protein; FN3523_1008; phage(gi29143753)     1e-13               MSKLLPTNSTKLEKDIVESFHYVVQNKEILIKKIWNVQECPSEFLVYLAYFVGVDFDIYNDLDDAQKRDYITKSIDIYRHKGTLGALRKALSVTGYTINIIEWYQDGSTPHTAKVRVESPTATIDVNLVLKIIKKTKNVQTVIQVSVVIDSQANIFRSIAQRLKIKQVFSNFTATPVYTNNIYKSLAYQMRIKHK
complement(1027780..1028625)       PROPHAGE_Xylell_Temecula1: phage-related baseplate assembly protein; FN3523_1009; phage(gi28198989)     1e-29               MSVNFDLNKLPYPNAITKVSYEDNLAALLAKYQELEPNWTAFLESDPIAKIFEAAAYVITVKDQERNDQIKAVLVSSAEANDLDNLGAFYALPREVDESDERYRTRILLAPDKMSSAGAAGYYEALSYDADSRVIDVKAHDDILQPGKAFVVLKSNENDDGVASQELIDTVSAYLNDEDRKPLGCQVLVSSVIPVMYTVEANVELNDNVDSVLIIQTMIKNIQELVESKKVIGGSIALSEIYASLNIEGVAIVQDLISPTANIATDVTELPFCTDIIINEV
complement(1028622..1028861)       PHAGE_Vibrio_vB_VpaM_MAR: baseplate assembly protein; FN3523_1010; phage(gi428782737)     9e-08               MLRDYGSDLPKYRDYPINRTLIAKIYKATAEAIDRWEPRVRLSGSKFKIETDETGKLALSIDFIYRPNGEIYSLNEVFL
complement(1029038..1029433)       hypothetical protein; FN3523_1011                                                    N/A                 MDNKELYDRIDVVNRDLQELKTKQAVAEKAQEIINKDTTEKIKEINTNLDLIKKHIQKIFDMLKEISGVKKLVVAIAGIVIAAVPVLTYYNEYLRNEPSPVIQQKEIGDLWSNVDSLNKMLAKMQGEIQKK
complement(1029501..1030010)       hypothetical protein; FN3523_1012                                                    N/A                 MSCEAVKGLAPSWGSSETNSATSNDSAQLQVKPNMALSATGDSKSNQGSVDKSTTSKVDTNNDAQSSTGSKNVLGKLEDKSVNSNQSSTTTKNSTDDDHYIAHGVQTINDSELQKYIIGLLVMTLIASLVINLILAILILFAYILGKRQRSKRELSLDNQVWAKQGFQL
complement(1030054..1031862)       PHAGE_Stenot_S1: putative terminase large subunit; FN3523_1013; phage(gi213163902)     2e-66               MSLYFLELLNKSINTYLKPVKELDISSWANEHVFLPPGTSAKPGRWKTIPYQQGVFDAIEDPKVSKISLEWGAQLGKTALLNNTIGYYIEHKPESQIMMQPSESDLKTWLETKFNPMVDYSKSVQEKLAKPRGRDGVNNQKMKKYKGGFLMFAWAGSPNTQRGRSAPKIYCDEVDGYERSPEGHPVNLVWQRAATFGRKRKLILTSTPTIKGNSFIDDSFNSGDRRRYYIPCPHCGHYQTLKWQNVQWQKDEKGIHLPYTAMYFCDECGAGINDGEKISMLRKGEWRAEMPFTGHASFHLSELYSPFRKFSDIVESFLEKKATRDLKSFVNVSLAETWEEEGEHVDPESLEARVEDLDVLPENCFFLTAGIDVQIDRIEVQTIGWGVGEESHVLDYHFIYGDTDKPIVWLKLNEYLDTKTFTHVSGRPLRIEYAGLDTGGSGNMTSRAYEYVRSRLYGRPLAFKGKGGAGVPLYTKPTLKLEKGKKRMFLYTIGVDEAKNVIYNRLQSDEAGPGKIHFNKKVCDKTYFNQLTAEKRMIKYEKGFPKFEWHNVAPDKRNEALDTFVYALATLRIAVGSGVDLDRIYAQNFKKKGKTKNESNNR
complement(1031871..1033886)       PHAGE_Salini_CW02: putative tail fiber; FN3523_1014; phage(gi423261944)              1e-15               MGLISRFSAAVGGGASGSGAVDSVNGLTGNVIITATGLGALTTAIVKTTDDTTRQAITNPNEKVLYVQDDGKVYIYSNSAWIDVTNTIEIVDNLTSTDTDKSISANQARILNGNDIDSISYDSVTDSIIVTKKDTTNISISLATRTAIQVALNSATMNNITAATVHEGFVGVDADLTTIKDKLDKLEEKNIYVDLTSLQADTANHKTNTLYYTKLEQSFFEYDGTNIILVLAISGSAGAINYGIYSTLAALQAAHPTVAAGDQAYVDTGAGNPMSLYYYDVDDGWITSGATSSLTAAEIKTLYEDNADTNAFTDAEKTKLASLVSNYYGSVSSSMTLMTSSWALGDYAWHSAMNLNSGAYVFRGNSTSDIRIMIDSSLVVDSLTSTSITQPLSARQGFELDQKKLDKTAQRVQSISLAGNNLQYVDELDNTNTINLSNINNSDESSTFSISLAGVSYWGDAQYNGSVDFPTVANFWNSMGNNIRSLTQINSANQPIYGVDIFSPGVSGISFNGGQWLNVPFDCRKAATPELAYIAVIQPINITAAPLGKLFGSDGGWGRVFGFDNRVAGFNFGIFNGSGVQGITTLEQGVTYVVACRWSIRDGVSVWVNLQKFGRYLVFPEGQTSASIGAQVGGFESFIGRKGDIILCRAAMSDERIESIISFLMRKYGLS
complement(1033888..1034169)       hypothetical protein; FN3523_1015                                                    N/A                 METRFADITTVAENIEDIMLRAGYSLAEIASMSAIKVYRTGSNQVYWNEGPSDQGMQNSVPFTEIAEMFAPPYNTIWLRSQVASTRVVFVRLA
complement(1034169..1034687)       hypothetical protein; FN3523_1016                                                    N/A                 MSEYVSSKELSEYLEISQRRVQQLANEKILLKDSRNSFALKENVKRYIRYISPTFKNDEEQEESNEELNVKYKKEKIRLTKYQADEQQIKAQLAQKRVVPVDDVISALADLFSLMRTKLFNIPERAEMEILGETDADVLNKKLTAEIRDALYEICDHEEQTLQNIVEGKGEN
complement(1034927..1035313)       hypothetical protein; FN3523_1017                                                    N/A                 MGNNNETSGFKILSRYVGDSWARVICENVKNKSRGRLVIPYKTTDKIDRFYEIIGDKKVADILIENFGGYRLFARRYRSKLYEKAINSLKRDGFNDSQIVAIIRADIELLGYQQKRNKKNDNQLDLDI
complement(1035460..1036728)       PHAGE_Stenot_S1: putative integrase; FN3523_1018; phage(gi213163927)                 2e-31               MTNKTITSTYLNKLEHSGDKSYRELILVDTNLYLAIQPNNKKSWIYRYRHRHQNKQFGLGRFPTVTLKKAKEIATEYNRLKEEGVDIAGYRKYQEINKDKLFQNVANKWYKKKEKELRKRTLTEYRKILNKDIIPTFQNKSVAKITLRDVVLFLQKTCQDSYTKFKKYQVILSGIFSYATVLQLCDYNIMTNDLSHIQPPKKAGGFAFINPILDSSNLSILLKKFDSIEYRPSYRRALQLAPLVAFRPSVLATLKWEYIIWSKSLLVIPAKIMKMKQDFIQPLPSQALKILEQQAKPKANNDDSEYIFTCSKGRPICPNKLREIVQQDLGFDGNKLPRQTIHGFRHIVSTGLYHLQIQYGWQSEAIELVLDHRKRNRIQATYNQYQYIEERREILQVWADYLDNLKNSSTPNFTPYIGDSKK
complement(1036750..1036944)       hypothetical protein; FN3523_1019                                                    N/A                 MPIQQYNSIKNKLKKKKITNPQKKIKINDIFVKNFSNYKAENNNTPLCIYRDDRLVLIPIRKPY
complement(1037067..1037285)       hypothetical protein; FN3523_1020                                                    N/A                 MTKKTSNHCHTIDESICEITGVKVENHITDPELYYQQRAQYVQTPTPPAQKRKIMIGNGNLVEFDFNKGLEK
1037653..1037664                   attR                                                                                 N/A                 ATAACAAAATTT
complement(1037714..1038436)       PHAGE_Clostr_phiC2: putative antirepressor; FN3523_1021; phage(gi134287384)          1e-44               MNITNFNKNIEMTSREIAKLTYKEHKNVKRDIENMLLGLELDRLKFERIYSDSMNREQLEYILPKDEILCLIAGYNVKLRMAIIKRIDELEKQLSSNSLQLPDFSNPAIAARAWADQVEKNLLVSKQLQEAQPKILFANAVSASKSSILVGELAKILKQNGVDTGANRLFSWLRDNGYLIKRFGSDYNTPTQKSMNLKLFELKETAITHSDGHVSISKTTKVTPKGQEYFINKFLTLIAA
complement(1038438..1038800)       PHAGE_Staphy_phi13: possible sensor protein; FN3523_1022; phage(gi29028688)          6e-12               MREIKFRAWDKKNKKMLKFNEIYPSMYTYDDSLEAMFSNAKDDGLEFMQYTGFEDENGVEIYTGDIVEYANTVDSYVGVVEYVNRYTAFRCVFPDGRWTDLYECIKVIGNKFENLEILEK
complement(1038797..1039099)       hypothetical protein; FN3523_1023                                                    N/A                 MKMRNGLFLDFILTQVAEPIYDALNEADKKFELMKAQNRLVVDFANDSKENIQLLSDYIYRNKHISKGHAKQAIKELQHQHETLEKKYKQITKLINDGEL
complement(1039206..1039463)       hypothetical protein; FN3523_1024                                                    N/A                 MGNEIDLVTERAIELITESAKAIELIKLFDEKTFPPAVIADLTNTKVRTVQNWFETGKLTNVSPAGKVKTAKFKEFKHLIPRGAK
complement(1039473..1040111)       hypothetical protein; FN3523_1025                                                    N/A                 MQELDRRRILEFLDANYGLFDGKTDDQAKIITWSWYEVIKPYSFNDVLTACKQYLANNKSKPKPADIKAELDTMRAKRHTVHLQVTNNPDYDADTRLTRQNFADIIKRELAPFMYMRLPEHIKEELQAKHNPSHIDDFINVAWGYMMHSDFKVIEVEMALGTIRGTRFQLKDFMKALLNAHEHNEEMKANPNKLEALKQAVFSMTQRQNKAA
complement(1040111..1040833)       PHAGE_Clostr_phiCD6356: putative phage replication protein; FN3523_1026; phage(gi326536888)     1e-25               MNDIYYVVHYWQRTDLGIDSQKYPKAVDIFAVIYGFSQDGKSLFSGDYEYLSRLVGTSVRTAKTVIKYLSDELEIIKKFKSEFGASNTYLYNSEKVALLRKESAMVALQQGNNCTFNSAMVARHYKDNNKDNNKDNNKDKKINKKDSDICTKVIDYLNQVAKTNYKPNSKQTRNLIQARINEGFTLEDFLTVIDNKTKQWISNPEMVAYLRPQTLFGTKMEAYLNEPKPKSRLDNIFGDM
complement(1040836..1041006)       hypothetical protein; FN3523_1027                                                    N/A                 MKINHVIKHFKTKAELARVLKIEPSAVSHWVKKDEIPAKRQLQIQKITKGKLKAGL
1041157..1041954                   hypothetical protein; FN3523_1028                                                    N/A                 MNMSHIKIELRKKGITQKELAEKLGITTNAIQKWFKGETSPTMNRYLQILDILGITTGEAEMYKLGRTSTGNIIHSQRTVDGDITNLAVSNNKGIVGSNNSNIAFGKNSNVSINSDAPSNDGSLASIPVIKREDILDFKNAKRIDSVAMKLPADKHNKCFAFEYTGTDMRYDTNSMLPAYSYYSIDDGSKIFVDISKDAINSLTSGDLVVCIADNKVNVRVLYNDGYDTTLMPLNSIAQNKDQNKELSKNKIVGRVFLIRFDRSV
1041954..1042835                   hypothetical protein; FN3523_1029                                                    N/A                 MYMSKKIIEFPKVLKLRENFAKIVEVLIDIKASFKDYELISLDFRKTSNADIETLLCITALTYKLNSFSRKIEIFIENLPKDEKIKRMLYQLGTIDKTKAKRLIDITEKKEKGIRIITGKNHSEEIVNKICDILFPLTKLGNKKLHKQCYFALDEAMANAEEHGYKHISDEWWLCSRETKYKKTFAIYDLGFGIFDSIKNKKTTDKGFEKFRTLASTNKHELIRQMCNGDMKYEYGRGNGITQFAKLVSKQFAYGSLNIYTCNTEYNFHADKFKEYNKAIDGTLIVWSIRKKK
1042811..1043149                   hypothetical protein; FN3523_1030                                                    N/A                 MVNKEKEVIQYNFAKEFNPRPGKRFESLTPGRSGEKFRDEVLEKIFQENKKIVIDASEISNPMIPSFLDEAFGAIATKYGLDKFLESVDIFSKKDKEIKDDMLYYVNRRFNP
1043524..1044318                   hypothetical protein; FN3523_1031                                                    N/A                 MLYLFDMRFFLSELQRIGNQTTVNGDIKNFSETLVIEKQIVQNDKHADILAAFDDNTLIVHGKFSKDLFVKLSEFISSKVKSGNNSLDTFLSERDIYFKEYQLCINLRKFIIQPGYLQFIDYTANYSNICVMYGTVAKIIKCKDGYIIKAIAKNGHKIIMTSSDSVILDGIAFYAFGRAEMLSEGFIKFHIHKDFIHLLPCKYGYDIKDRIIDSNYDINQQIDVMLGNKTVEVDLIEHDCNKIDSHSDLKPIDHLKAFWKSLFN
1044349..1044741                   PHAGE_Serrat_phiMAM1: hypothetical protein; FN3523_1032; phage(gi440789441)          5e-20               MGKYIDQHLRKDEVIEYRASVSNWVFLIPVIIAILIFPIGLILLLYPIIIKLTTEMAITNQKVIGKTGFISRNSIDLRFEKVESVKLSQGVLGRILNYGTITVSGTGSTQANFKFISNPVAFRNFVNDKI
complement(1044743..1045870)       PHAGE_Escher_HK639: integrase; FN3523_1033; phage(gi356870629)                       3e-20               MKFTKTSIAEIENPEKQTDYHDSDISGLILRVFPSGIKSFRLRYTIGNKRKIYTIGKLGSITLTQAKKEAQRLIGLISQGIDPVQERKSKTTSNHDITLREYINDFYYDWYNKNNKNTKALEFSLGRRLEKIMDKSLKELNDKKVMIKYLNDYQKINKTSDATYNRMLSTLKGMFSRAYEFGYIETNNIKDVKLLKINATKVRYLSSSETTRFFESLELITSQQAKEIIIIAYYTGMRKSEILTLTFDDIDFDTKQIVLKSENTKSSKVRYIPMHEKVLQILSNKNQKSGYIFVSEKTGKPYDNIDRSWTKLMKLSEIENFRFHDLRHNFCSMLVMKGVPIYTVAQLAGHADVKTTQIYAHLSPDVKKSAIDLLL
1046022..1046068                   attR                                                                                 N/A                 CCTTGACATGGTAGGGGTCACTGGTTCGAATCCAGTTGCGAGTACCA