gi|309972265|ref|CP002276.1|  Haemophilus influenzae R2846, complete genome. [asmbl_id: NC_000000].1819370, gc%: 38.02%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1069777..1069788                   attL                                                                                 N/A                 TTTTAATGAAAG
complement(1084777..1085829)       PHAGE_Megavi_lba: putative Sel1-like repeat-containing protein; R2846_1037; phage(gi448826087)     3e-07               MKKKLTLAVLLLAVIGGGAVYFTQYYPEYREIKQLERLVSAQEYYGDQQARKALEDFSPARLRALAEKGNAVTQYQLGRYYFIKGQKNLATEWFLKASNQNYPLAYRGLATIYNDKGNKESSKHYMKMAADAGDNFAKIILAIDAVNKDKDFLTGYMLVEQAANNGYPMAEAQLGRWYFDGNDNIKPDWEKAFYWLDKAYKSSLLHHQPAVFRQVENNRFRPNSVYRELAILYILGIGTVKDENKAEQLLQEHNKETKDEMTVIGTKVKLIKLKKLKDEAPNDDVKAKFETLQLELENSQDPAVFVELGNAFLYKDEQKAKSYYGMACDLRSQEGCDKYRELNQKQDTNK
complement(1085829..1086593)       PHAGE_Megavi_chiliensis: putative Sel1-like repeat-containing protein; R2846_1038; phage(gi363540752)     3e-19               MKLTKTLLTTALFGASIFSFQSTVYAMEEEQVDKIVHLFEQKDFKSALAIIRPLAEQGDGIAQGMLAVLYKNGDGIKQDYFEAIKWYKKSAEQGVRIAQYDLAGMYINGLGVKQNYQEGFKWLKEAAEQDDVDAQFKVGMMYKDGVGVKQNNTEAVKWLKKAANQNDTESQMILGDMYYDGDGVKENKTEAIKWYQKAAENNNSRAQAIVGLAYMGGIGVKQNFATAKKWFGKACDNKEQKGCEMYKQLNQGTK
complement(1086606..1087817)       Hypothetical protein; R2846_1039                                                     N/A                 MPTLQCEFWNVGQGLFSSGRIQMGDAPAFHWVYDCGTNSSQKLIQNAVQKYNQQENNANIDLLVLSHFDKDHISGVKELLKNKRKIKRWVVPYYPLWQRLVIASLLDIQPDDEEWAFYQNPIQYLKADFAEELKETQFLLLPAKENESEILITLEPSNFDDVLSFKTTEKLSNEFDNLKQNVHWLNPDKALLFRKGEEQFEFVLYNVPFHLLAKVPTNLTAFQKQVEQIIQSHQSNSTDPTPALKTLYTLAFGNGNKNKNIISQYLYIRNITSTAVWGLGNNYIYDIPKNDGNEILVFPKDRNKNAILYTGDAFLNDLPLLTDLTQSLGVERMARIYCLQVPHHGSKHNWQQGLANIFSPCLSVFSADSQRRNGHPHSEVLKDFSTYTPILVNKNKRLFIHSI
complement(1087817..1088863)       PHAGE_Megavi_chiliensis: putative Sel1-like repeat-containing protein; R2846_1040; phage(gi363540607)     2e-30               MLLFILSIAWADTLEQQFQQGLEATKRGDYQTAFKLWLPLAEQGNASIQFNLGLMYKKGQGIKQDDFEAVKWYRKAAEQGVADAQLNLGNMYAKGLGVKQDDVEAVKWYRQAAEQGNAKAQFNLGLMYDNGRGVKQDYFEAVKWFRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYANGRGVKQDYFEAVKWYRKAAEQGYADAQANLGSAYSAGHGVRQDYIEAVKWFKKAAENGSADGQFKLGLVYLIGQGIQKDRTLAKEWLGKACDNGNQNGCEYYGELNRGER
complement(1089016..1089552)       Conserved hypothetical protein; R2846_1041                                           N/A                 MEHKLEDIIAIFNQCFEEEYNTRLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIAHWLVAGKERRKLEDFGYWYEPDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADNLNGNPGDTQPFKQAVYEQVKTYAEKGLPKRAETLCHALAIFYGTEDRIDLSKFDVARI
complement(1089943..1090077)       PHAGE_Haemop_SuMu: Mu-like prophage protein gpG; R2846_1042; phage(gi418489082)      9e-05               MIDIEINNAQEVTALLERLAQATAHRAPLMRSIAGSMESAVAQL
complement(1090296..1090487)       PHAGE_Haemop_SuMu: hypothetical protein; R2846_1043; phage(gi418489083)              2e-07               MDKLLGQDWQECYPNTLSQNEKACLKQALLHRFTYSQGESFGLQSYLRDLRIINDYPETSEVN
complement(1090638..1091309)       PHAGE_Haemop_SuMu: MuF; R2846_1044; phage(gi418489084)                               1e-66               MVEVERPADKQGNREKTVGFKLPDGTIRVTDKGFDYNVGRLNYKPNLDLYPEKLAHAFAKVEMKGGEFKHDFELLAKHVAEMKQTLSPDGKKLTAEQMLQVRDSLTKNFKFAAGVLSAESKDFLKSKTGTVWLSDDTLIKQFNSRDGQDFGLESYALFPDLFNQPDIVLQDNDRFYFIKNFEKQRILGVIKHLSKFNEIFVLSAREINIKEVEKMKGKLAVIK
complement(1091366..1091605)       PHAGE_Haemop_SuMu: portal protein gp29; R2846_1045; phage(gi418489080)               6e-23               MSLRHLAQTITQQIILPYLQINVDPNIAPHRIPYFEFDTKEYEDLSVFADAIPKLTGIGVQISESWVRDKLGIPEPQEG
1091599..1092129                   PHAGE_Haemop_HP2: rep; R2846_1046; phage(gi17981825)                                 9e-25               MTKRGDQPICIEYEECEPNKYGEIRKKIVGVKNRFTEKKIITKLKNWVIKSAKSALGSTALNSESTETNKAHRAAWTCVNNCNRSKIEQQANLLMLPIGSPLKPSQIDLLMSHGRLPLNDYRWICCENDEVFIKEEKIPLAQAFGWGESLGDFRVNFMFIISTSSWCWRFWFLKIF
complement(1092237..1092545)       PHAGE_Mannhe_phiMHaA1: integrase; R2846_1047; phage(gi109289985)                     2e-22               MATIIKNGKRWRAQVWREQIRYFFDSSRRKKWAEMLEKQLESGKYNEIPDITLDELIDKYLKEVTVTKCGKREERIRLLRLSQTPLAAISLQEIGKAHFREW
complement(1092758..1092834)       tRNA                                                                                 N/A                 GCGACTATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCACTGGTTCGAGTCCAGCTAGTCGCACCA
1093063..1094499                   Pyruvate kinase; R2846_1049                                                          N/A                 MSRRLRRTKIVCTMGPSTDRDNNLEKIIAAGANVVRMNFSHGTPDDHIGRAERVRSIAKKLGKTVAILGDLQGPKIRVSTFKDGKIFLNVGDKFILDAELPKGEGTQESVGLDYKTLPQDVVPGDILLLDDGRVQLKVLSTDGAKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKADIITAARIGVDFLAVSFPRSSADLNYARELAQQAGLNAKIVAKVERAETVANDEAMDDIILASDVIMVARGDLGVEIGDPELVGVQKKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMASVCLGAEKMPSINVSRHRMDKEFETIEESVAMSAMYAANHMKGVAAIVTLTSTGRTPLLMSRISSGLPIFALSRNQETLNLCALYRGVTPIYHGEESRTEAGAKAALQSLKEKGYLSTGDLVLVTQGGQGATQTNVCRTLIVE
1094533..1096047                   PHAGE_Entero_P1: Ban; R2846_1050; phage(gi46401697)                                  1e-172              MDFSTVFYFLFSPHFSLKSNRYLRYHRRHSSIEISPMASQPQIKSSDKKTAQVSIPPHSIEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTEMEHLMRNQSPIDLITLDQALRSRGVSDEVGGFAYLAELSNNTPNAINILAYADIVREKAILRELISVGNRIAENSYSPKGQDIKLILDEAEREVFAIAEKRTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTGVTTGFTDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDEIEWNKIASVVGMFKQKNNLFIDDSSGLTPTDVRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLKFNGQFSRFDNLAEQREYRDDY
1097216..1097227                   attR                                                                                 N/A                 TTTTAATGAAAG