gi|317181290|ref|AP011945.1| Helicobacter pylori F57 DNA, complete genome. [asmbl_id: NC_000000].1609006, gc%: 38.73% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 734227..734239 attL N/A TAAAAAGATTATC 734480..735547 PHAGE_Vibrio_K139: Int; HPF57_0696; phage(gi17975106) 3e-09 MKHPLEELKDPIENLLLWIGRFLRYKCTSLSNSQVKDQNKVFECLNELNQACSASHLEKICKKARNAGLLGINTYALPLLKFHEYTKKISLKSLKSIDEVLLAEFLSVYTGGLSLATKKNYRIALLGLFSYIDKQNQDENEKSYIYNITLKNISGVNQSAGNKLPTHLNNEELEKFLDGIDKIEMSAKVRTRNRLLIKIIVFTGMRSNEALQLKIKDFTLENGCYTILIKGKGDKYRAVMLKAFHIESLLKEWLMERELYPVKNDLLFCNQKGSALTQAYLYKQVERIINFAGLRREKNGAHMLRHSFATLLYQKRHDLILVQEALGHASLNTSRIYTHFDKQRLEEAASIWEED complement(735696..736118) PHAGE_Acanth_mimivirus: probable methylated-DNA--protein-cysteine methyltransferase; HPF57_0697; phage(gi311978100) 9e-20 MVLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHNTPMNTPLKLSVQALERYFLGQLFEFNAPLDLIGTFFQKQVWSALMTIPYGKTKSYDEIAKLINNPRSCRAIGNANRNNPISLIVPCHRVVRKNGALGGV complement(736122..736496) hypothetical protein; HPF57_0698 N/A MQGLKLFLIGTLTGFFAITLGIGGGMLMVPLMHYFLGYDSKKCVALGLFFILFSSISGAFSLIYHHIINKEVLLAGAIVGLGSVMGVSVGIKWIMGLLNEKMHKALILGVYGLSLLIVLYKLFF complement(736507..736890) hypothetical protein; HPF57_0699 N/A MGIYALYIAIGLFTGILSGIFGIGGGMIIVPIMLATGHSFEESIGISILQMALSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFALLVVYSMIQFVLKPKKKRFYSGY complement(737006..737953) putative lipopolysaccharide biosynthesis protein; HPF57_0700 N/A MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDVHDSVGVLDEYFAQSEFFTNIEDFEKHLEQSKAMGKEINYLSVCTPTHTHFDHIRFGLRNGMHVICEKPLVLDPSEIQELKDLEVKYQKRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTYISVQGKWYFSSWRADVNKSGGLATQMGVNIFDTLLYLFGGVKDKVINREEPDCVGGILFLEHAKIRWFFSINPEHMGVAKEKVYHKMILEGEEVNLTQGFDNLYIESYKQILAQGGFGLDDAMASIKLAYELRNLSVSEPNEDSHTLCCKNKTNQ complement(738015..740381) PHAGE_Bacill_SPO1: gp2.9; HPF57_0701; phage(gi209972894) 1e-133 MITVVKRNGRIEPLDITKIQKYTKDATDNLEGVSQSELEVDARLQFRDKITTEEIQQTLIKTAVDKIDIDTPNWSFVASRLFLYDLYHKVSGFTGYRHLKEYFENAEEKGRILKGFKEKFDLEFLNGQIKPERDFQFNYLGIKTLHDRYLLKDANNNPIELPQHMFMSIAMFLAQNEQEPNKIALEFYEVLSKFEAMCATPTLANARTTKHQLSSCYIGSTPDNIEGIFDSYKEMALLSKYGGGIGWDFSLVRSIGSYIDGHKNASAGTIPFLKIANDVAIAVDQLGTRKGAIAVYLEIWHIDVMEFIDLRKNSGDERRRAHDLFPALWVCDLFMKRVLEDAMWTLFDPYECKDLTELYGQDFEKRYLEYEKDPKIIKEYINAKDLWKKILMNYFEAGLPFLAFKDNANRCNPNAHAGIIRSSNLCTEIFQNTAPNHYYMQIEYTDGAIEFFEEKQLVTTDNNITKCANKLTSTDILKGKPIYIATKVAKDGQTAVCNLASINLSKINTEEDIKRVVPIMVRLLDNVIDLNFYPNRKVKATNLQNRAIGLGVMGEAQMLAEHQIAWGSKEHLEKIDALMEQISYHAIDTSANLAKEKGVYKDFENSEWSKGVFPIDKANNEALKLTEKGLFNHACDWQGLREKVKANGMRNGYLMAIAPTSSISILVGTTQTIEPIYKKKWFEENLSGLIPVVVPNLSAETWNFYTSAYDINAKDLIKAAAVRQKWIDQGQSINVFLRIENASGKTLHEIYTLAWKLGLKSTYYLRSESPSIDEKSVLDRSVECFNCQ complement(740545..741015) hypothetical protein; HPF57_0702 N/A MNIKERLSISEYRWAVAIVYAGCISTFRCSQGAVDPLFSPKDSYCAWLTLLIAALLSNLLFDPRGRDCYKSFQVRYPRFLKAIFKARFFGAFHDAVLGARLRDFYVALLTMPFVAAIHEISAYFGHPSNLLIEGLVIFSFVCVFGLCVKLCAKWGW complement(741039..741419) PHAGE_Lister_vB_LmoM_AG20: putative tail lysin; HPF57_0703; phage(gi472437346) 3e-07 MCQTCLESQLMKGFVMSGLKTFGCVVVLCGAMANVAIADPRIEARGELGRFWGEAVGAGMGGAMGGMIGSLVGPWSTVFGAGIGGGIGAYSGAEIGDRVEDFIRGVDREPQTPREPTYDRHFVYDR complement(741686..742192) hypothetical protein; HPF57_0704 N/A MDTTKENLNGSKDRLSGSEYSRAMGLVYAICISIATRIFYEINGSASDPIFNPKYSYYVWLVALIAALLSNLLFNPKGKSVGYLMIETWQGFPKFFKAIFKARFFGAFYDAVLGARLRDFYLMLSIMPFVIAMHEISAYCGHPSNFLVEGLVILGFQGFLKFCAKWGW complement(742232..742582) PHAGE_Brocho_A9: gp99; HPF57_0705; phage(gi327197735) 1e-05 MNLNFMKGFVMSGLKTFSCIVVLCGAMANMAIAGPKIEARGELGKFIGGGVGGFVGDKMGGFVGGAIGGYIGSEVGDRVEDFIRGVDREPQTREPQAPREPIRDFYDYGYSFGHAW complement(742816..744117) PHAGE_Acanth_mimivirus: probable UDP-N-acetylglucosamine pyrophosphorylase; HPF57_0706; phage(gi311978096) 4e-24 MLSVIILAAGKGTRMHSSLPKTLHTICGEPMLFYILETAFSISDDVHLILHHQQERIKEAVLKRFKGVIFHTQIVEKYSGTGGAIMQEDKTPIPTQHDRVLILNADMPLITKDALAPLLKSHNNAIGLLHLADPKGYGRIILEDYQVKKIVEEKDANIKEKEIKSVNAGVYGFEREFLEKYLPQLNDQNAQKEYYLTDLIALGINENENIDAIFLEEECFLGVNSQTERAKAEEIMLERLRKNAMDLGVVMQLPNSIYLEKGVSFKGECVLEQGVRLSGNCLIEDAHIKAYSVIEESQIVNSSVGPFAHARPKSVICNSHVGNFVETKNAKLQGAKAGHLSYLGDCEIGKNTNVGAGVITCNYDGKNKHQTIIGENVFIGSDSQLVAPINIGSNVLIGSGTTITKDIPSGSLSLSRVPQTNIENGYFKFFKKS 754727..754739 attR N/A TAAAAAGATTATC