gi|317176808|ref|AP011940.1|  Helicobacter pylori F16 DNA, complete genome. [asmbl_id: NC_000000].1575399, gc%: 38.88%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
980907..980919                     attL                                                                                 N/A                 TTAAAATAAGGTT
complement(989888..990652)         PHAGE_Human__8: LANA; HPF16_0937; phage(gi139472804)                                 2e-08               MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQALQDANAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKHKSEKQEDLKKEMLELERLALELESLVENEVKNIKETQQIIFKKKEELVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGAYENSAQPPKESQEESQELV
complement(990662..991393)         hypothetical protein; HPF16_0938                                                     N/A                 MALVKEVLEVLERLSPFELQESWDNSGLNVGSENHEFSQIIACLEITLKIALNAPKNALIITHHPLIFKPLKTLNDEAYPGNILKILIQKNISVISMHTNFDKTHLNKHFASALLGFDGLMKKGLMLVKENANIEFDALVKKIKSSLGVGSLACVKSSPIIKDLAFVCGSGASMFSSLKAQSCLITGDVKYHDAMIAQSLNISLIDATHYYSERGFALIVAEILHSFNYLVTIENFKNPLQII
complement(991395..992291)         glycyl-tRNA synthetase subunit alpha; HPF16_0939                                     N/A                 MQDFSSLLLKLQEYWKNQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRPTDGRYGENPNRLGSYYQFQVIIKPSPSNIQELYLKSLEVLGINLNEHDIRFVEDNWESPTLGAWGLGWEVWLDGMEVTQFTYFQQVGGIPCNPIPVEITYGLERLAMYVQKVENILEIEWAKKDHDSVNYAQVHLESEYEFSKYHFEIASVKRLLEMFKNAQAEALHCLENKLPLPAYDFVMLCSHFFNVLDARKAISVAERQNYILQIRDLAKGCAVLYKEQEEEREERLKNALTKA
complement(992305..993243)         NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; HPF16_0940                     N/A                 MEIAVFGGGAWGRALAFAFGEKSEVKIISRRDLNEPLKKLNDALISKGSAPIEQVDLQRGLKAALYVIAISVQHLREWFQNASLPKNAKVLIASKGIEVLNRAFVSEIAKDFIDPNSLCFLAGPSFATEIIQGLPCALVIHSNNQALALEFANKTPSFIRAYAQQDIIGGEIAGAYKNVIAIAGGVCDGLKLGNSAKASLLSRGLVEMQRFGAFFGGKTETFLGLSGAGDLFLTANSILSRNYRVGLGLAQNKPLEVVLEELGEVAEGVKTTNAIVEIARKYGIYTPIASELALLLKGKSVLESMNDLIRRA
993539..993550                     attL                                                                                 N/A                 TCTTTAGCTTCA
complement(993561..995084)         PHAGE_Clostr_phiCD6356: putative phage tail tape measure protein; HPF16_0941; phage(gi326536862)     6e-07               MFSKAENHQNEKPLKERYDLIAHVLNAKIENKGLEEYQCILDNNLLLEFASGVDSLKEKEIALLELQEIKKELQLVASYPSLFQKNMVAVGGGFSAGKSTFLNHLLGLNLKLSANSTPTTAIPTYCLKGEREVLMGCSQNGGMVELPHLTFDHKFLDSLGFNLKEVMPSMLLSAPSVPFEFLCFIDTPGYDAPNQGYTGGDRQDSKEYLANAKYILWVIDCQHGTIQSDDLDYLQELYEEHGKQVFIVLNKADLKITIQLEEIAVQTKETLEDNGIEFLGIGAYSSKNYEKCKEINENSSIFTPLEGFLHSLDKKSEKQNEILKVLYKVGLAYEKAIQQDADKFKRYQDALHSIKLDLMQKGFDDFSDASFNKIESLKKEFSEQERSKRENLEKLNQVINLFKKSIDKVFDRVSAFTLEKYKEENDDEENDEENYREFEEIKKMVLYFRDCWMFVVEQLDGKSSQTELQKYKGFVSRNNKLLQSEFSMKNLLTLRQFKDTYREWYSN
complement(995077..995328)         hypothetical protein; HPF16_0942                                                     N/A                 MGWVVKKVIEDVREQKPYLASLINKPSKLNSEIESVMQQSLIKNAKLEIEKINLSFSKDFHAEFKSLNNTQLPSDLSVKLEHV
complement(995401..996360)         PHAGE_Clostr_st: putative IS transposase (OrfB); HPF16_0943; phage(gi80159731)       9e-43               MSYPKFKKKREFQGSFYIGGDQIKIIQTASTYYLKIPNLPPIKLTEKLRFQGKINNVTITQKGDHFYVSISCCVDESEYKRTHKLQDSHNKLGIDIGIRSFVSLSNGLNIYAPKPLDKLTRKLVRISRQLSKKIHPKTKGDKTKKSNNYLKHSKKLTHLHEKIANIRLDFLHKLTSSLIRHSNSFCLESLKVKNMFKNHRLAKSLSDVSMSVFNTLLEYKVKYSNKEILRADTYYPSSKTCSNCQKVKQDLKLKDRIYQCLECGFELDRDINAAINLLKHLVGRVTAEFTPMDLTALLNDLSKNRLVTSKVELGIQQKS
complement(996495..996662)         PHAGE_Staphy_vB_SauM_Romulus: transposase; HPF16_0944; phage(gi472437926)            3e-05               MSAISITHKIALKPNNKHITYFKKAFGCARFAYNWGLAKWKENYQLGIKTSHLQL
complement(996637..996822)         PHAGE_Microc_LMM01: putative site-specific integrase-resolvase; HPF16_0945; phage(gi117530307)     3e-12               MVIINKGDENVRFEEELAKDVLEIITVFSARLYGSRSKKNKKLLDEMQEVITNNVSYLNHA
996830..996841                     attR                                                                                 N/A                 TCTTTAGCTTCA
complement(996839..997249)         PHAGE_Microc_LMM01: putative site-specific integrase-resolvase; HPF16_0946; phage(gi117530307)     4e-34               MGVTIQTLRNWDKKDLLKPDELTKGGERRYKLESLRRINRNIVFNQDELKTIAYARVSSHDQQDDLIRQVQVLELYCTRCGFNYEVIQDLGSGMNYYKKGLTKLLNLILDNQVKRLVLTHKDRLLRFGAELVFSIL
complement(997342..997482)         hypothetical protein; HPF16_0947                                                     N/A                 MIESFDYPKEKALEEIKALDLSVKDIEKTYEKLRGYKQKLKSYNNL
complement(997488..997679)         hypothetical protein; HPF16_0948                                                     N/A                 MEEISHYIQDQIQDHLDLTTHLIYSDKDNNALLEVADKIDAEKLFSSLYLKRLKSLIPGYKTA
complement(997694..998305)         hypothetical protein; HPF16_0949                                                     N/A                 MILHAQTNFVKFLEQVLEVLKEVEIDKTECSILLESIQKQQLVIPVVGNFSAGKSTLLNRFLEKSVLPTAITPETSLATELHYSANERIEAFSNNDEKAESFELNEQSFEVIKENAPKYSYLKVYLNNEALKNSAPLVFVDMPGFDSPISSHTHAILEYLERGVHFVILTSSEEGNLTKRMVRELKNLLEFDKGLSFILSKRN
complement(998588..998815)         virulence associated protein D; HPF16_0950                                           N/A                 MYAVTFDLDTNCLNESAVNLSKVYSDIRKFMEQHGFKWQQGSVYFGDEAINAVTCVATVQILAKQIPSFAICVKM
1011083..1011095                   attR                                                                                 N/A                 TTAAAATAAGGTT