gi|320456974|ref|AP010889.1| Bifidobacterium longum subsp. infantis JCM 1222 DNA, complete [asmbl_id: NC_000000].2828958, gc%: 59.86% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 312143..312154 attL N/A TGTACAGTAAAC complement(319549..320034) PHAGE_Ralsto_phiRSA1: transposase IRSO15-like; BLIJ_0273; phage(gi145708108) 3e-05 MTSSVDRVRKAEGGHNALLKRTKYLWPGNESSLTELQLETKRGLQKQRLKTARACRMRETLQDIYADSASRAEAEAGFRALCSWMMHSRLEPMKALARQLRRHWDYILAYFDHRRTNAVLEGLNSVIRHVKTRARGFRNMEYFSTMIYLTCGRLDLRTVTT complement(320058..321440) PROPHAGE_Escher_CFT073: transposase; BLIJ_0274; phage(gi26246249) 4e-77 MVTEAVKPMAGDVAGNDNGAVTDSRSLVDSLVASGALDPLFERIDGGQIELTGDGGLPGELTRAALERGLQTEMTSHLGYAPGDRESKAGGGHANSRNGSYPKTPSTPVGEAAVQVPRDRDGSFTPRLAPKHSRRLGGLDEMIISLYAGGMTVRDIQHHLAKTIGTDLSPETISNITDAVSDAVLEWQERPLDESYPVVYLDAVRVKVRDNGRVLPKAAHIAIGVDMDGFKHVPGMWVQDNEGASFRAHVCAEMANRGMADALIVCCDGLKGLPEAVEATWPKAIARTCVAHPIRAANRFVADHDRKRVCAALRSVYRAPNGQAAEKALGEFAESELGRRYPSVAATWKRSWDRFVPFPRFPPMLRRVAYTTNSIESPDYQSRKVSRNRSQFPNDQAVVKLFWLAICDIEDKRSLKRAKDGNKTRRKSEGRLIEGRMTTNWKQALAQLAAAYPERMEPYL 321551..323014 PHAGE_Lactob_1: integrase; BLIJ_0275; phage(gi219563220) 2e-08 MPGVVFCRVWTQAGLAWPKAGKRPRPYDFRHRLAFANIERWARDGMDVMAMLPYLAAYMGHAGIGSTPYYVHAGPDFMDGYADIVADAERVVPGNGGTMNTARPMNTRPDEPDFWRVARGWLHHRLSRVRGNSPKTVEACRIGLESYIRWLETMEGVERDDIGFGHFDRAHLGRWVEWMRAGRGYSDRTIMLRMTTMRAFLGHASLEHPTLTALANDAAGIRVRPPARKPVDHLGEEHTKALLTAWGTGDAKSRRNRMLPILMYDTAARIGELAALTLEDVRMDEPARITITGKRGKTRIVPMGERTRRHLTSYLDEFHPDTDGSDGARPLFHSTRNGTIRPLSVDRIDEILKTAASKARGTCPSMPGRIHCRLIRRTRAMDLYQQGVPLPTVMQLLGHESMSTTSAFYAFATLDMMRKAVDAADPGPDPPRRHGSANNGSDSSAPSNSQKTLNRETTRNAALPPQSRTVSRLNNKPGLITVKPISV 323022..323303 PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; BLIJ_0276; phage(gi17546155) 8e-17 MGWQYQHPWWREELERLNIRQSMSRKGNCLDNAATERVFGHLKDEFYRGREFDSYEQFKAELDAYIVHWNTKRRQIRLEGHTPEEFRNMSLTA 323381..323770 chorismate mutase; BLIJ_0277 N/A MSETSSDWQKTTIDSAQAAAHPETAQAVARIKALRQTIDNIDSAAIALLAERFKTTSQVGVLKANAGFAPEDTKREDYQIERLHRIAIDAGLDPEIAEMYREFVVTEAKKRHQRIADAGGDPGVLDVFA 323892..325934 PHAGE_Equid__9: envelope glycoprotein J; BLIJ_0278; phage(gi216905924) 2e-07 MRCGTALVSCALCVASILGGAWMSRPTPVDYGPVLATASDMYAVTDAEGEPVRWYVVGKGGAGNGASADSGNSGSTDTDSANSDSGTSKVSRVPASAATLPWKVSVTYSLDGPNVEANEVAGASGLIGVYIDIKPQTKEANRTIPVVAFTVPTQVADDVSADNSITVTMQGSNTVVAAAGKAATGLEFSCYMNAKDFSMSSVALAVLPSNSSSPAVGANPDAANAAAQPAADTDVAQLTASAATLVDALTDAGSGEQQQLIEQLQTLRDNERALNKSVVAERETAHKRTFEDYMAAYVGSYTTHLSGSIGTSTQLPALMGTAGELSGDTPLAQAVLDLANAVNNVSAAHQHAGAVDALDEVIRRIQQQGTSGLVDDLTAEASEEATRGSKQYADGQSQLSAAMIPYSMKYTDFYTANLSALTGGTSSGATAYESQAIAETNGSDELADAQSKVDAAMSTLATASEHTGKATALRQIVLRFSDQFEGGTSSASGSDGDGSSGDVSSGPVTEAQALTSLVDSQSQSFYGKTRATQAKRKADAARKQAKAVQQQQSQHSKASLVDDTMSMSAGDVMNYAGGLTSAIGGGDKSDSSKSAGSGTNDSAKSSDTDDSGNNLDTAPVLFGFGTGGTLLKHDMNALINETVKISDAGTLLAQAVAQLDSPNTQQKTAETRYLIVIPTV complement(326292..329027) PHAGE_Megavi_lba: isoleucyl-tRNA synthetase; BLIJ_0279; phage(gi448825309) 1e-15 MTEGKSIINANLTPLPDKVGVDGLEDKWRAVWDEDGTYKFRNTRDRKAVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRMRGYDVFYPMGWDDNGLPTERRVQNYYGVRVDVSLPYDPDFKPPFEGTDGKKIDAKDQVPISRKNFIELCERLTAQDEKLFEALWRKLGLSIDWSQTYHTIGQHPQRVAQKAFLRNLARGEAYQQDAPGLWDVTFQTAVAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQYVYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWRDLKLPTRPIIQRNGRIVMDTPDWIEDPAGREVFAETAGKTTFSARKIIVDKLRESGDLDGEPTPTKRMTNFYEKGDKPLEIVTSRQWYLKNGGTDAKLNAELIERGKELEFHPDFMRVRYENWVHGLNGDWLISRQRFFGVPFPLWYPVNASGEPDYDHPITPSEDRLPIDPTIDVPEGYDESQRDVPGGFTAEKDIMDTWATSSLTPQIVTHWAEPDEASQALFKSTFPMDLRPQGQDIIRTWLFSTVDRAHLENKCLPWAHATLSGWILDPDHKKMSKSKGNVVVPNEPIEKFGADAVRYWAAAARLGLDATYDIGQMKIGRRLAIKLLNATKFALAIGREDENHHVGAAAEAAWNPADVTEPLDRAAMAKLAVVVRQATEALESYEHSKALEVIESYFWQFCDDYIELVKNRAYGTPDEHGNVPSEKAVKSARTALGLGLDAFARLLAPYLPYATEEVWSWMHAGSGSVHRAAWPVVDPYVEAATGASPELLTWAGKAVEQLRKIKSEAKVSMKTPILSVALSAASEGVDAIHAALGDIAQAGRVVGKFDLVAKHAEESAAEDAPETEVAVEASELGEPPVKKPKH 329066..329077 attR N/A TGTACAGTAAAC #### region 2 #### complement(1802506..1804557) PHAGE_Lactob_KC5a: putative minor tail protein; BLIJ_1706; phage(gi90592623) 6e-06 MTSQKNAELGSATSSVKPIDPHTRFIVVGVIVVGSFIALLNQTVMSPALPALMRDFNITTGTVQWVTSVYMLVSGIMVPISGYLIDKFSTRKLFAGALATFMVGTLLCAVAPNFMLLLVGRILQSAGSGVLLPLVAVVPMLVYPPDKRGTAMGLAGIVMAAGPAIGPVVGGLVIDSFGWRPMFIGIAVVALVILVGGTMMLKNVSELKNPKLNILSVILSTIAFGGLLYGFSSASTMVWSSPVVIISIVVGLVAFVAFVYKQVKLDEPLLRVDTLATRNFRNSVILVTLINAAVAATNVTLPIFIQNVLGQSATVTGMVMLPAAAVGIILSPVAGAAFDKFGPRGVGIGGLALMTISLGLLGTINTRTSVLFVAVFCALQASGQAIANMPINTWGVNALPNDMIAHGNAIANTGRQIAAAIATSLLVTAETSMTASHMSQGVKSATASGIAFSYLLCAAISLVALIICIFTVTSRAKEKAARNAKASEAQASAEVAAETTEGQPAEHHYAGAYVAPAASLFKQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMKSIATYESRTVSTGTGSTMVVFDDETVTSKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRLVGVIRRKSVMEHAFDALFPKDDR 1804603..1804884 conserved hypothetical protein; BLIJ_1707 N/A MLVSRREDTDESGRKGKAAIRSAFIYGKRFAALRKLMAMVSDSCDVDCGWAIGTSRHKACPRYTSIENRAIRGLANRTLPTNDPRQARAMNIA 1805162..1805341 conserved hypothetical protein; BLIJ_1708 N/A MRVLGNILWIILGGLAIAIGWALVGLILCISIIGIPFGIQAFKMAKLALWPFGAEIVNL complement(1805810..1806031) PHAGE_Lactoc_ul36: putative holin; BLIJ_1709; phage(gi21716128) 3e-09 MDDEETAGYLIPDRVYDVLKWVGLIALPALAVCVQTIGTAAGWTGTDLTVTILTALGTLVGALIGASRLKPDA complement(1806091..1807209) PHAGE_Entero_EF62phi: endolysin type Endo-N-acetylmuramidase; BLIJ_1710; phage(gi384519788) 1e-30 MDIKNKSKPSLVTRILAVVIALLLGVSPTTALADAGVDVSNWQGCVNAAALKADGADFLIAKVTEGNGYTDPVGDCNIQAAIDAGMYTGAYHFARPDLGNSPEAEADWFLSQTVGYRAQHVLPILGWEPGGAYNGWTWWAKRWLDRVHEVWGVKPLIYMSGSVVTSNDWSAVVAADYGLWLAAYPNGYAAETIREAGSPTWSTGQWPFAAVWQYTSSAYGGGIGPLDANTFYGDATTWAAYAGGNPAQPDGSAVDITPSGNTGGAATTPDAGSTGGCGSSCVTIQSGQTVSQFWSDWWNVTVPSGDPNRVHPGDVVCHNGDTTANGGSRTYVVQSGDYLSGIAARLGISWTQLTGYRSGNPSLIYPGEVLYY complement(1807357..1807689) PHAGE_Mycoba_First: hypothetical protein; BLIJ_1711; phage(gi472437700) 6e-06 MNPPAGTPLWAVILIAVVPSLAMVIVAVIQSRQIRGLRDQQSATKWEITNDHQAPLRVDMDEKHEKVMDAIDALRDDMNGEFKTVNERVANAEREHLELREDIRELRRHR 1807721..1808515 hypothetical protein; BLIJ_1712 N/A MGNRFCRICGEHKPLTLEHIPPRSTGNDHVVVVHRGDEAVMHSLFDMEVRDDDGYRQSHGMTFKTLCEDCNEYLGANYVETFKGLYLDFAHESGDILDGLDRDRNESETDGVERYCEFDLGEGFRPLAFVKQVVSNFCATTAPGSMLDCKDFLLDRGNISLPARYRLHMAVLPKLDGESVFSGWMRVLFDDGTFCDMAFIRMPPFGFVLYDTESSTYLPDRAGDITPMSRMGWDETGKITLVLPTVTGRNASRPYLWGRYQNAV complement(1808531..1808716) hypothetical protein; BLIJ_1713 N/A MSYHEYNQSVTGDVTAKIMDRVDRCWKIDAYGRIAIDPGAIRYNEGWIQLMGIVPLDEPDR complement(1808674..1809279) PHAGE_Rhodoc_REQ2: terminase large subunit; BLIJ_1714; phage(gi372449823) 6e-19 MTRGTNPSTPALSEAARYLAIPTGIVSTGFGKVRTITGRLGIRFDRWQEGIGQLMLAKRSDGAYAAGVGGVVMSICRQMGKTFTVGNDPGARHMGETGQHVWAARLAAWLDGQEWEPYFRVPVSVHDDLLAIDPDAYVNPGIITVDGGLLRVNVSLVARNPTIRASRTSTHSRSTAGTPRCWAWDDTRCPTTSTTRASPAT complement(1809728..1809997) PHAGE_Strept_3: hypothetical protein SpyM3_1123; BLIJ_1716; phage(gi28876293) 2e-16 MLAAYDVCAICGRPVDKTLRSPHPMSAEVDELIPVSRGGDPLSFNNCRLTHRRCNRIKSDKTDAYARSHLGGAAAQPKATSIPFELSDW complement(1810044..1810235) hypothetical protein; BLIJ_1717 N/A MMPPTITLKITDNADRRLAVMSVPVPLSGEPGECAMFDAERFEQLLDKGCIAFRKVFDDECQE complement(1810830..1811888) hypothetical protein; BLIJ_1718 N/A MVRSTVDYYAFTVKTRKKNPDIPRDVLDVGGGYSVLAYLCSYLEHVKGTILKDERRERIYSVSDYEVHGRLVLIDVLSGQYGESGQLLDILRGNVVRDINPDEAAVKTVRIVFCCPRGDDVKMAIFAVEHMNSINGKFVIDYFAKCLRAFIPGLVAKIDGILEKEAWLDSSSLISMKIPISSTDQQLTVDNGLDDDPKETMYGRMALVVLPPKGVSVLNPRFWRALRKKNMGREGMLTIPSLNNESIPKQGVLVEAAGIDGRKKTFTIGNEKSPKIREVITGDGEPRLDNGQLRRVLSDSIFSKYHDEQIRLETGWDSGEMHEEIPDSEVIDWNTLFEQVNPQNGDRYELES 1812055..1813161 PHAGE_Spirop_R8A2B: putative transposase; BLIJ_1719; phage(gi9626114) 4e-06 MGQQYSHLSSEERILIEKLHCEQHPGIRRTAERIGRDKSTVSRELRRGLWFASNENGSYRPYRPKRLKTGPWTSGPFYSALAAQRKADLRRRESRKPRRMDSGPLRAWVLDSLRRGWSPELIEGRLKAQCAGDPSMRISHECLYQWIYAKPQRALDLRQYLARGRKRRTRKKGRKAKGPRIPMRVPIADRPEAVGSRKGFGHFESDTVVGAAPSRRCVNTQVERRSRRLFARLVDDKSASATARAEYEIFKDMPPAARVDRTWDNGTEASLHMLVDEALGMLTYFADPYSSWQRGSNENRNGRIRRYLPKGTSFEDLTQDELDAIVGEINDTPMKLLGYKTPNEVWDEEMAKLQSKATNTKTGVALTN