LOCUS NT_167352 6847 bp DNA linear BCT 22-APR-2010 DEFINITION Borrelia afzelii PKo clone fragment c. ACCESSION NT_167352 VERSION NT_167352.1 GI:294679245 DBLINK Project:17057 KEYWORDS . SOURCE Borrelia afzelii PKo ORGANISM Borrelia afzelii PKo Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Borrelia; Borrelia burgdorferi group. REFERENCE 1 (bases 1 to 6847) AUTHORS Glockner,G., Schulte-Spechtel,U., Schilhabel,M., Felder,M., Suhnel,J., Wilske,B. and Platzer,M. TITLE Comparative genome analysis: selection pressure on the Borrelia vls cassettes is essential for infectivity JOURNAL BMC Genomics 7, 211 (2006) PUBMED 16914037 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 6847) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (12-APR-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 6847) AUTHORS Gloeckner,G., Schulte-Spechtel,U., Schilhabel,M.B., Felder,M., Suehnel,J., Wilske,B. and Platzer,M. TITLE Direct Submission JOURNAL Submitted (08-JUN-2006) Genome Analysis, Fritz Lipmann Institute, Beutenbergstr. 11, Jena 07745, Germany COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..6847 /organism="Borrelia afzelii PKo" /mol_type="genomic DNA" /strain="PKo" /db_xref="taxon:390236" /clone="fragment c" /plasmid="lp31" /note="low passage strain" gene complement(<1..176) /locus_tag="BAPKO_6050" /db_xref="GeneID:9006589" CDS complement(<1..176) /locus_tag="BAPKO_6050" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003579866.1" /db_xref="GI:294679246" /db_xref="GeneID:9006589" /translation="MATLRESGVLEQDADIVIFLHQDDEKCKENTGTLIDNLVEVKVL VDKNRNGPTGTVTM" gene complement(224..637) /locus_tag="BAPKO_6051" /db_xref="GeneID:9006580" CDS complement(224..637) /locus_tag="BAPKO_6051" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003579867.1" /db_xref="GI:294679247" /db_xref="GeneID:9006580" /translation="MSKRYYHNELTYRDLENLEKQFGIKIDNLVSKIDSVEKNLNTKI DGIKNEFNAKIDGLNIKIENLNTKINSVEKNLKRDMYNLAQDLKKDIQINSKLLLEKL KVSNRIIILITVLVVPIAISSMANIVMSIIGSYLK" gene complement(980..1057) /locus_tag="BAPKO_6052" /db_xref="GeneID:9006581" CDS complement(980..1057) /locus_tag="BAPKO_6052" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003579868.1" /db_xref="GI:294679248" /db_xref="GeneID:9006581" /translation="MGSLEQDANIVIFLHQENSGIKGEI" gene complement(1550..1825) /locus_tag="BAPKO_6053" /db_xref="GeneID:9006582" CDS complement(1550..1825) /locus_tag="BAPKO_6053" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003579869.1" /db_xref="GI:294679249" /db_xref="GeneID:9006582" /translation="MDKKTNIITIPNLKRGLDKVPLFDINNKIQRIKILYEIKQKELY KYDDFAHFGDFIEFFEVAKSKAYTYLKIYEKVLDSKVSIDKNKESGF" gene 2601..3212 /locus_tag="BAPKO_6054" /db_xref="GeneID:9006583" CDS 2601..3212 /locus_tag="BAPKO_6054" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003579870.1" /db_xref="GI:294679250" /db_xref="GeneID:9006583" /translation="MKKYIINLILCLLFSSCNLFSNDSRSSQKYNFKVKAKSVLNSTD KNNIDTKKGTNTTLCIKEENSRIVVKDCINNQELFKVKSKRRYDFKKAMLLGIKTALK VINIGNNKLSSIKKYNDHILLEFKDNKIYIIQLSELKKHLLKNKKKPLLGSPVPGGGE AEFIDDPYGIIEGELQAEREEEMLDREEFGDEEDEELEEEIGE" gene complement(3650..3769) /locus_tag="BAPKO_6055" /db_xref="GeneID:9006584" CDS complement(3650..3769) /locus_tag="BAPKO_6055" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003579871.1" /db_xref="GI:294679251" /db_xref="GeneID:9006584" /translation="MEKKVYEFYNKKLKDEGVINKWIKKKPIIITLASLKGGG" gene complement(4212..4385) /locus_tag="BAPKO_6056" /db_xref="GeneID:9006585" CDS complement(4212..4385) /locus_tag="BAPKO_6056" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003579872.1" /db_xref="GI:294679252" /db_xref="GeneID:9006585" /translation="MRKTAPYKTDFYTLAGKFKDTYTTKWKVNKITSFSGHAGIIANN ILANILTKGLKFE" gene 5138..5422 /locus_tag="BAPKO_6057" /db_xref="GeneID:9006586" CDS 5138..5422 /locus_tag="BAPKO_6057" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003579873.1" /db_xref="GI:294679253" /db_xref="GeneID:9006586" /translation="MRMIEGYSFYKVSEAQEILKNKFDYKITKSHLRYKLEVFECYIR IGNIMMIPEDFLKYLTLSLVLFKKNEKYKIEIKKEIKEKMPKFRELIKKG" gene 5481..5621 /locus_tag="BAPKO_6058" /db_xref="GeneID:9006587" CDS 5481..5621 /locus_tag="BAPKO_6058" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003579874.1" /db_xref="GI:294679254" /db_xref="GeneID:9006587" /translation="MCTEVKFLTNIGFIIATFLFKFLFPLTYNDETNNSEETDNLLVE TL" gene complement(6005..6628) /locus_tag="BAPKO_6059" /db_xref="GeneID:9006588" CDS complement(6005..6628) /locus_tag="BAPKO_6059" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003579875.1" /db_xref="GI:294679255" /db_xref="GeneID:9006588" /translation="MKKKIFFGLLLVCIFLVFFLFVKKENNIIYNKIIEKSEDRVFID ETYTYLFKDGNLKELVFIKSEIMSPEIDEYKKNINLTGYLIDSYRALYPGYKFDFTVH DNKIIGFKSVIFEGLEDAQVSRHENNLPSEKWQQLKDYNIGDPNINEKFFNLKFPFVV KNTLRVTLSKRFFKKIKKLKRLKIVLITNEDREYKINIENFLPKYNL" ORIGIN 1 tccatagtta cagtaccagt aggtccattt ctatttttat caactaacac ttttacttca 61 actaaattat caattaaagt accggtattt tctttacatt tttcatcgtc ttgatgtaaa 121 aaaatcacaa tgtcagcatc ctgttctaat acacccgact cccttaaagt tgccaaacta 181 ggctctctac cctctgttat gggtaaaaaa ttccttgtga tttctatttg agatagctgc 241 caattatcga cataacaata tttgccatac tagatatagc aataggaact actaatactg 301 taataagaat tattatcctg ttacttacct tgagtttttc caataataat ttgctattaa 361 tttgaatatc tttttttaga tcttgtgcca aattatacat atctcgtttt aaattctttt 421 ctacgctatt aatcttagta tttagatttt ctatcttaat atttaaacca tctattttag 481 cattaaattc gttttttata ccatctatct tggtatttaa attcttttct acactatcaa 541 tcttagaaac aagattatca atctttattc caaattgttt ttctaaattt tctaaatctc 601 tatatgtaag ctcattgtga taatatcttt ttgacaaatc ttgtgctatt agttactcca 661 ttcccagccg caagaattct ttatagattt attcttcagt aacatttgtt attgtcaaca 721 ctgatttcat aatttattta cctgctaagc acattgtaac ataaattaag gccaaattaa 781 cagcacattt tcaaaattga cgaaggcaag agactcaaac tcaaaatttt tagaaatttt 841 acaaaaaagt aaataatgtt caaatacttt tttgcattac tttctatctc taaacctacc 901 aaacttaggt gtaaagtcta tagttgcaat actaatagcg ccccacattt atttttagca 961 acgataactt ttattttagc taaatctccc cctttattcc actattttct tgatgtaaaa 1021 aaattacaat attagcatcc tgctctaatg aacccaattc tcctaaagtc gataaaccag 1081 aatccctacc ctcatagttt ctggcaactt gcgacagaac tattattgaa atttcaaact 1141 caaaaaagca agtgcacgta tattgcggct caaaaatgca acttgctcat aacaaggagt 1201 attattatgc aatgtagtaa ttaagctaat atagccaatg acaataatat caatattaca 1261 atttcttttc atttgcctag cttcgtcctt taacaaagaa taacaaagaa tgctccacct 1321 ataattttta tgaaattata ggtggagcat tctttgttaa aatctccttt ttttatttat 1381 aaattctttc aataataaag tacaatctta tagaatcttg tttacaaaaa tcatataatt 1441 ctttatattt tactaaaatt ccaataggaa tactttcgtt gatatcttta ggtgcactat 1501 aaatatcttc gtttaagaat ttttaccttc tatatctttt aatatcctct taaaatccac 1561 tttctttatt tttatcaatg gatactttac tatctaaaac cttttcataa atttttaaat 1621 atgtataagc tttgcttttt gcaacttcaa aaaattctat aaaatcgcca aaatgagcaa 1681 aatcatcata tttatacaat tctttttgtt taatttcata caaaatttta attctttgaa 1741 ttttattatt aatatcaaat aatggcactt tgtccaaacc tcttttaaga ttcgggattg 1801 ttataatatt tgttttttta tccatttata tatcactcct gctttttttt actttttatt 1861 gtaaaaaagt cttttctaat ttattcaagc catattttat tcttagaaat ttattatctt 1921 cttttaagga gaagaaatta attaaataat aattattttt attattaagt ttttgaaaag 1981 ttggacttaa tttactttct ttatgataat tcctaaattt tatcaaatgt ttaaaatttt 2041 tttataatat atttttttat tatctatttc ttcaattcta gtaaaagcag ttattttttt 2101 gcttatttat atttacatta tattttaatt cttttttatt tattgttttt ttttcttttt 2161 aatttcttgt ttattagaat tttttaaaaa atatatttaa cagctcttat tctatatatt 2221 attataattg gttatacata tagtgacatt tcagctttaa gattgccctt ttatttttac 2281 tttcctctat aaaagcatgc tttatgctac taaaacaaac atagatcagc ttatacaata 2341 ggtgatacct tatctacaca tagcattcct ttacattaca cctaaaaatg gatcaataaa 2401 aaattgtttt gtttaggatt tgcttttaat accatcctta taagtttgta tttttacact 2461 tacatctttt attgcttcta taaaaatttt atttttaaaa agatatttat taattataat 2521 gttaatatta ttagaaaata attaataaaa aatttaatat atacttttaa atgaagtatt 2581 tttaaattaa ggagtataaa ttgaaaaaat atattattaa tttaatttta tgtttattat 2641 tttcttcatg taatcttttt tcaaatgatt cccgatcaag ccaaaaatac aattttaaag 2701 taaaggccaa atcagttttg aattccactg ataaaaacaa tatagatact aaaaagggga 2761 ctaatactac actttgtata aaagaagaaa atagtaggat tgtagttaaa gattgtatta 2821 ataatcaaga gctttttaaa gtaaaatcta aaagaagata tgattttaaa aaagctatgc 2881 tcctcggcat taaaacagct ttaaaagtta tcaatattgg caataataaa ttaagttcta 2941 taaaaaaata taatgatcat attttattgg aatttaaaga taataagata tatataattc 3001 aattatctga acttaaaaaa catttgctaa aaaacaagaa aaaaccatta ttagggagcc 3061 cggtgccggg aggaggagag gcagaattta tagatgaccc ttatggtata atagaaggag 3121 aattacaagc agaaagagaa gaggagatgc tagacagaga agaatttgga gacgaagaag 3181 acgaagaatt agaagaagaa ataggtgaat aacaatctaa tgattgagaa ataagatata 3241 ttgattaaat atttagtaat tctagctagc agcctaacaa taattataaa cttattgtta 3301 ggcttattga attgacctgg attagaaaaa attataagaa gatttatatt attttataat 3361 aagaaaaatt cctatgtgat ttatacatta aagcattctt taaaaggaaa tttctactag 3421 aagaagtatc tattataaaa aaatcgaaat atattcatta attttatttt cacatttatc 3481 aaaataggta tttcctttta aaaattcata aacattgtgt tttttaatat tagaaatata 3541 ttaattaaaa taagaagtta aagaattttg tggatccaaa acaattaata gtactttttt 3601 gcctaattct tttaatatat aagaaaaaat tatagaaagt gagcttttct cacccccccc 3661 cctttaaact tgctagtgta attataattg gttttttttt gatccattta ttgataaccc 3721 cctcatcttt taatttttta ttataaaatt catatacttt tttttccatt tttttcaagt 3781 gtgataaatt aaattgataa tactcggtgt tttctttatt ctttcttaga agtgttctta 3841 aagattgaac atatgcttta atagagccct ttttaaaggc aaattctata taatagagtt 3901 tttttattgc ataggtttta ttattttctt ttttaagaaa aagggtttat cgagtttatc 3961 atgcctatat cttatttcta agaacttatc atattctttt aaagaaaaga gattaaaaaa 4021 aataaaatct tcagcgttat taaatttttg aaaagtaagc cttagccttt ctcctttgtt 4081 tgtaattcta aaaccaatta aatgtttaaa tattttggtg tagtatattc ttctactatt 4141 tacttcttca attctgttaa atataatttt tttctatgtt attttttttg tttctgagtt 4201 tttaaagtaa attactcaaa ttttaatccc tttgtcaaaa tgttagctaa aatgttatta 4261 gctattatgc cagcatgtcc tgaaaagcta gttattttat ttactttcca tttagtagta 4321 taagtatctt taaattttcc tgcaagagta tagaaatcgg ttttataagg tgcagttttt 4381 ctcataaagt gaattttgtg tttgtagagg tttagtttag ataagaaaaa ttctttaata 4441 tcttttactt cataatcata ttttagataa tttttaaaat ctttatagtt taataaggta 4501 ttttttagtg ttttaattgg ttctttagta ttagaaatta ttgatttaat tcttttaaag 4561 aaagagtttt ctatagaatt cttattatat atatttatat attgttttag gaactataac 4621 ttctattaat agtacattat ctcgtatatt ttcattttta gcactaggca tatgttcaat 4681 tttaattaat tttataagtg ctataaataa atataatatg ctcttcttgt aacttgttct 4741 acaaaatcat atacttctct attacttatt aaaattctaa taaaaatatc attattattt 4801 aatttactta tattgtaatt taaataaaag taaaacaaat ttataattat tagcaaagca 4861 tctaccaaat aaataaggca aacttttatt tatgtaaaaa ttactaaata atggtataac 4921 gatttacaat tatttaaatt aaatttttta aagtcttttt aaaagattag gcaccatttt 4981 ttaatggtgc ctaatccaaa taactaactt ccccaaaatg gagagaaatg gagaagctgt 5041 gaaaaacata gaatttatac cttataatat acaccatata aatatatatg tcctattttg 5101 gagttttttt attatgaatt aaatctatat ttattttatg agaatgatag aaggatattc 5161 attttacaaa gtttctgaag ctcaagaaat tcttaaaaat aaatttgatt ataaaatcac 5221 aaaaagccac ttaagatata aactagaggt ttttgaatgt tatattagaa taggaaatat 5281 aatgatgatt ccagaagatt tcttgaaata tttaacactt agcttagtct tgtttaaaaa 5341 aaacgaaaaa tataagatag aaataaaaaa agaaattaaa gaaaaaatgc ctaaatttag 5401 agaattaata aaaaaaggat aaatatattt ataaaaatac tctatctcct aatattaaaa 5461 acaaaaaact tctcccttat atgtgtacag aagtaaaatt tttaacaaac attggcttta 5521 ttattgcaac ttttcttttt aaatttttat tccctttaac ctacaatgat gaaacaaata 5581 attccgaaga aacagataat ttattagtag aaaccttata attttttacg ctaacatttt 5641 gaaccctagc ttgcttttac ctagatgaaa aaactttcct ttattaccta taggaatcca 5701 atttagtaat taattataag aaaatttgaa tcataatcta ccacccattg ctgatgttgt 5761 caaaatttat ttcctgccgt taacatataa aatatttttt taggaatttt tcttttaaat 5821 tatattcacc caaatcagat accatttacc cttcatgcca aaaaatatca tcttgaataa 5881 tggaattaaa aatgtttcta attttttaaa attatcaata ttacaactca gcaacaatat 5941 aattttataa aaaagtttca atattaatta gaaacatact atttttcaaa aatttcagtt 6001 caaattaaag attatatttt ggtaaaaaat tttctatatt tattttatat tctctgtctt 6061 cattagtaat taaaacaatt tttaatcgtt ttaatttttt gattttctta aaaaaccttt 6121 tagatagagt aacacgcaag gtatttttta ctacaaaagg aaattttaaa ttgaaaaatt 6181 tttcatttat atttggatct ccaatgttat aatcttttaa ttgttgccat ttctcacttg 6241 gcaaattatt ttcatgccta gaaacttgag catcttccaa tccttcaaaa atcacacttt 6301 taaagcctat aattttattg tcatgcactg tgaaatcaaa cttataacca ggatataacg 6361 ctctataaga atctatcaaa taacctgtta gatttatatt ctttttatac tcatcaatct 6421 caggactcat aatctctgat tttataaaaa ccaattcttt taagttgcca tctttaaaaa 6481 gatatgtata agtctcatca ataaagactc tatcttcaga cttttcaata attttattat 6541 aaataatatt attttctttt tttacaaaca aaaagaaaac taaaaaaata caaactaata 6601 ataacccaaa aaatattttc tttttcatta aaaatctatc ctacttatga aaaatcatat 6661 caaacgcact ataaaaatac atactatttt ctttacttac tttgaaagaa tatttttttt 6721 tctcattatt tatttcatct ctaccatctt attttatata tttttatata gtgttatata 6781 atttttataa tttttatttc atttcaccgt cagtaaatag gctcatatca aaattaaaat 6841 aattaag //