>gi|340783893|ref|YP_004750510.1| type I restriction-modification system, M subunit, putative [Acidithiobacillus caldus SM-1]
MVDTRKPTYIPGSSFPNESDALHQEGNWLWIPLCKEWRDVTNKPEEIVRQKFIRTLVEHYGYALEQMDQE
RRTQHGHKSPRADIVVWQTAMEKEAGRTPVLVVECKTDTIEIQERDYYQGESYTRATGCEFFIATNARHT
AVFKLVPGLPGGFVAINEIPKATDWGSARRLKEIRESLRAFNRKEFQDLLFVCHSILRDVHKMDPGRAFD
TISKILFIKMYVERSGQHGTFTTDYLDRRAAVRLPTDPAVHDGLFEQTKAYYKADDLFAASDKLDISEET
FRRIVKQLERFDLSKTGDDIKGLAFEKFLGTTFRGELGQFFTPRPVVEFMVDLLNPREGERICDPASGSG
GFLIRAFEHVRAQIVADIQRQKDEERARIEALGLPEEEEERQIEEAFSRLNRELLPSDDNNKPIDTRVGR
LAWQCIYGTDAEPRAARTAKMNMIMHGDGHGGIHYHDGLLDINGIFGGRFDVVLTNPPFGSNVGRDQKVG
GSDETRVPKDEAYLARCREGGYGPAWEESHQSLLAAAAARKPILDLFEIGKGKKNRPTELIFVERCLNLL
KPGGRMGIVLPDGNLNNPSLAWLRRWAEGKAKLLAVVSLPEATFRSSNATVKASLVFLRKFTEAEAAQWE
AAWAQAHAELDARFDQQRDEAHAAYAPRIVCGDDAEVQRLLDELAALGIQRTLLRWQHGEAPAYPRQARP
TVQNKPAWTGEAAKEHKEHKKAAAELKKQADAALAAVRKRSDALFSELKAKYKAIDEAHTAALWARVRER
FDYPVFVAAPKSVGITSTGETGEGVANDLPELLKAYREFAHWLAQGAQPEATPNFPGPSTA
>gi|340783894|ref|YP_004750511.1| conjugative transfer protein TrbL [Acidithiobacillus caldus SM-1]
MKKYGIWCLFLLLGLFVSPDVLAAPAPSINGSGAGVILNAFDSETLRWYQSLKADAEEIFYMLFGLDFVY
LVSQWLIGGKDVHEVFTSFIKKMMSFAFFYTLLLNGHKLIGWVENGFQQSAIQATGASGGLLSWIFGTAS
KVFMACLVGPRIPDKSTGVLESIWQTITGGPTVLLSDILGMLVGLVVGIIALLAMIYLALEYIAIQMEVA
MVASIGIILMGFAGSRWTVQHAEGYLKYALSVGVRFLVILLWIGFLQKSAGTVITQILSQVNSNHPTANL
SGAVVAYGEVLIFVLLIAWMTKKLPSIASSIMSGASSLSGGSEGTALLAGAAIAGGAGLMGGAALAGRGG
AGALTGAQAANMGGAAGELKGAGGGGTFPGGGGGIAGGLSGSGGGGVRDMEDFPGAENAVPAPDPGTLKT
KRQDAGFVLPPSNWGASPSAGASPSASPKPAPGSSASSPLRGAAILRGAALAGRSPAPAGSNTMDSGPAG
GTPAGATPAPGDVVATDTGAESGPAQVTQGAGGSDDLGTDAGASRVTESAKPASGGGTSASQETPTTSAT
PSAGQQAPTPQEALRAALQQSIQQAFAPMQESLNKLNDTLAEGAGRQEKPEGFMDKVGKYQKRHQLTESL
LSPGQAEKTGVQAANHGLKHSE
>gi|340783895|ref|YP_004750512.1| P-type conjugative transfer protein TrbJ [Acidithiobacillus caldus SM-1]
MSTRVRRIVSVLLGGMLVLPVCADAGGGLTGGATLPEQIVQEATLIQSKISGAERLVEQIQQYENMVQNM
VTLPQTLMNQVLQPVDQLYGLVSQAQALTTNAINISQQFQNLNAGFNPQITAEYSSQYESISQGLNNALN
TLIQTAGLNPNDFANQAQAQQAIANAMANPNSRNALLQGAVAVGQQTTASLTQLYNLTRAEAQTEADWRK
AQLEHTTHQDELNQTGSQMLFGSNPLDERITTHGGTLNATSNALTASVN
>gi|340783896|ref|YP_004750513.1| NADH oxidase-like protein [Acidithiobacillus caldus SM-1]
MTRLLIIGGSDAGISAALRAHELDPQTEVSVLLADEYPNYSICGLPFYLSGETPDHRQLAHRTAFDGIEI
LTNHRAVSVHPAAKTVDVVRGANGSVKTLRYDHLVIATGAVPVRPQGLPGLDLPGVYLLHTMGDGFAVHS
RLMGGETRSAIIIGAGYIGVEMADALRHRGIDVTLVSHTDPVFPSVDPSFGRLIGEELSRHGVRVVVGCT
VERIEAADNRRGLTVSGSGGFTASADLVLVATGARPDTTLAAAAGIALGPSGAIRVTQRMETTLPGIWAA
GDCAETWHRILQRPAYLPLGTTAHKQGRVAGENAVGGERLFAGSVGTQTVKVFELAIARTGLREAEARTA
DFDPVTIETETWDHKAYYPGAQKLRVRVTGDRRTGRLLGAQILGPWRSEVSKRIDVFATALFHGMGVEDL
NDLDLSYTPPFGSPWDAVQMGAQAWTSVMKNEVASCSPPIDPQILGRCARFPLVTLSTRQSG
>gi|340783897|ref|YP_004750514.1| arsenite transporter ATPase-like protein [Acidithiobacillus caldus SM-1]
MLFLQNPPAFLFFTGKGGVGKTSLSCATAIHLAGQGKKILLVSTDPASNVGQVFSQEIGNKITTISTVAG
LSALEIDPQQAAQQYRERIVGPVRGALPDDVVKGIEEQLSGACTTEIAAFDEFTALLTDATLIADYDHII
FDTAPTGHTIRLLQLPGAWSGFIEKNPEGASCLGPLAGLEKQRQRYAEAVKALSDPERTRLILVARAQKT
TLDEVARTHEELAAIGLSRQNLVINGVLPESEAVHDALAAAIHRREQEAIANMPAVLRDLPLDQLPLKAF
NLVGVEALSSLFSDRDEAAPVVAGAPAKPVDLPPLSTLVDEIAETGHGLIMMMGKGGVGKTTLAAAVAVA
LAERGLPVHLTTSDPAAHLTDTLAGSLDNLEVSRIDPQAETERYRQHVLVTKGKDLDAEGRAMLEEDLRS
PCTEEIAVFQAFSRVIREAGKKFVVMDTAPTGHTLLLLDATGAYHREVARHAESNVRYTTPMMQLQDPAR
AKVMIVTLAETTPVLEAANLQEDLRRAGIEPWAWLINNSLSAAPTASPLLKRRAAFELTQIEAVRTRYTK
RVALVPMQAEEPIGIEPLLALVEPRNGFGLGGAKHQKVAL
>gi|340783898|ref|YP_004750515.1| trans acting repressor-like protein [Acidithiobacillus caldus SM-1]
MKKIEVFDPSLCCSTGVCGVEVDQALVTFAADVDWAKQNGAHIERYNLAQQPQMFAENATVKGFLQRSGQ
DALPLILVDGEVALAGRYPTRDELVRWAGLAAAPSMKTPSGGCCGGGSRTC
>gi|340783899|ref|YP_004750516.1| ArsR family transcriptional regulator [Acidithiobacillus caldus SM-1]
MRRNGCCLELRQGTVARPVTHSNESDNMNILFLCTGNSCRSILAEATFNHLAPTGWKAMSAGSQPTGTVH
PRSLALLAREGIDTNGLHSKSWDNLPLAPDVVITVCSNAAGETCPAYLGSVLRAHWGVDDPAHATGTEAE
IEAAFTTAYRILRRRIEAFHALPLAQLAHDRTRLKAELDRIGVLSA
>gi|340783900|ref|YP_004750517.1| arsenic operon regulator-like protein [Acidithiobacillus caldus SM-1]
MEKQAATSIFESLSSGLRLDVFRLLVKKGPDGMVAGEIANALDIPPANLSFHLKALSQARLVTVEQEGRF
QRYRADIPLMLDLIAYLTDECCTGSPAKCVEMVAASNCAKELLPALSPTPTKAIT
>gi|340783901|ref|YP_004750518.1| resolvase-like protein [Acidithiobacillus caldus SM-1]
MTQAAQGHRFIPDTFLFGGILQGQRIGYVRVSSFDQNPERQLEQVEVGKVFTDKASGKDTQRPELDSLLA
FVREGDTVVVHSMDRLARNLDDLRRLVQKLTRRGVRIEFVKECLTFTGEDSPMANLMLSVMGAFAEFERA
LIRERQREGIALAKQRGAYRGRKKALSPERAAELLQRVKAGEQKAKLAREFGISRETLYQYLREIGA
>gi|340783902|ref|YP_004750519.1| hypothetical protein Atc_3p10 [Acidithiobacillus caldus SM-1]
MHWLTNSPQGFVVVLVLGTAIGLIGYAIPSVLAGIGHARHRRGIALLNLSLGWTVLGWIAALVWVLFDEH
GNDPEWP
>gi|340783903|ref|YP_004750520.1| hypothetical protein Atc_3p11 [Acidithiobacillus caldus SM-1]
MRHRIGWILVLVSTGALAATPASDLPKLTPAEHRYFVHHSLGFHDTFMPYHPGPRWDLQHAQALHLTKAQ
ILALRRQVVGMVRDTKAALQRVHTAQAHYLAQAHQPDPSIRTIRADFAALGLAEAAAASAMMEHHLEAYR
LLDPAQQKRYQQLAKDMREQH
>gi|340783904|ref|YP_004750521.1| integration host factor subunit A-like protein [Acidithiobacillus caldus SM-1]
MTVTRKDLAYYLADTLGFTVTEARTIVDRFFDQIRQTLAQGEEVKLSGFGNFVLRDKRARPGRNPKTKVP
VEITARRVVTFHASQSLKGHCNPPPPPAEEVPPVPVQSHRSR
>gi|340783905|ref|YP_004750522.1| hypothetical protein Atc_3p13 [Acidithiobacillus caldus SM-1]
MPSKIERITQQLAEYEAKSKAARAELQKLRKEQDRQARIAARKERSKAIFAAGTVVEAAGLLSLDRTTLL
GILLEAKGNLQDPQKVASWKRLGEQQDPSQKSTDTGTGATA
>gi|340783906|ref|YP_004750523.1| relaxase/mobilization nuclease domain-containing protein [Acidithiobacillus caldus SM-1]
MINPETRATDKIANLHGDGMAIYHLHAKTWSKGAGQGAGGHARYVLRQGPYARRVIERVDGSAVRRVEED
RAAEVVASYSGHLPAWADGDPLAYWDAADAYERANGTVYRELEFALPGELSERRNLKLAQAFAEALARVD
RGATPYTLVLHRSTRDPELLHCHLMLSDRVNDGYERSPELWFRRAANRGKDPARGGAPKTQARIAQDWLG
TVVRPLWAELANAALEQARCGARIDHRSLEAQRRERELLAEQAQGRGDELAAARYRKAAGILDRPAQPKR
GRVLEHGGPDKAPGQALVWARYQEDLARRRAARERLAEADGVVRELREEIARERRREERRAAAKRELDAS
HGWRPDRVATAQMVLAAVLDLGQAHREAVQERWDARRERRRVAIEAQRRVEQERQERRGQLLGLAASLAA
DAECRLRLREAYEAAGFRLEQRPDGKWVFVYLHGDLLEERQAVREARRAWDERRAALEAQRAAAREAEER
RRREGERDRATEQEQGPGVRHPDKPRWQVERELILTEVYGSAVAEHMGRWYRIERRADALVLSNREASVT
DFGDRVVAHEGNDKEIEALVLLAQAKGWERVTLTGPREFQERAAQAFVKAGIALEDQALEARAKEAIERQ
RREDIRERALLRQGYRRDAWEIRERWHWRQQERARRLEAERELARIEEEAEQARDAWRTVWRKTGHLVDA
DAQEPIPWGIWREQTLAERYGPDIAARAEAEYWYTRLRPDLGGLDISRNGQEVVDAGAALQVCSAGSMSL
AVDLVRAKGWKRVAIGGPEDFRERAARALIEAGMVLADEALEQRAKAALDAERVQQERERALRRAMEGIK
AHRIRWRRKDGTMGEQRALDYLEDRLFRGFTIQETAEGFRWWSADGKPGAVVGDAQLMALFRAAKAADQD
LVRVVERIRMEVGMPNAAADRARGRTVTPKRGLGDDW
>gi|340783907|ref|YP_004750524.1| hypothetical protein Atc_3p15 [Acidithiobacillus caldus SM-1]
MTTLKVTAKGQVTLRKSVLHHVGIRYGDQIEVELLPGGRVLLTAGRPAGTVEGFIGVLAGKTRRVASIED
MNEAIAQGWSGKE
>gi|340783908|ref|YP_004750525.1| hypothetical protein Atc_3p16 [Acidithiobacillus caldus SM-1]
MKVAVDTNVLVRAAVCDDPAQAQAAAAVLREAERVAVSLPCLCEFVWVLLRVYGFTESDVAGAIRALLSA
GNVDVDRAGAEAGLLVLEAGGDFADGVIAYEGYCLGGETFVSFDKRAVRILAAQGHSVRLL
>gi|340783909|ref|YP_004750526.1| ABC transporter sulfonate/nitrate transport system substrate-binding protein [Acidithiobacillus caldus SM-1]
MKRLPVFTFACFVAVSPIVYAKTINISIGYQSMCTDTYPAGTVIKGLHLLQKYLPHSGKYANVKYNIIWR
DYSSGAPITNMMIANKLDFGTMGDYPLVVNGAKFQQTKNERSYLITMTGYNLDGAGNGIVVPIKSKITNV
GELEGKVISTPIGSSSWGMLYEMAQDKHIPMSSLHIINQSPMAGIAAITADKIAAHADFCPISEYMEYKG
VGRMIYNGIDTRVPYLHGAVVTKSFAEKYPQIVVAFDKAVIAADAWITKNPYVASKMMAKWTMIPKEVLY
LYFSHGGYLTLNPAITEKWVDTLKYDHSILSKYAGSSSFQVGSLRSSLPRIR
>gi|340783910|ref|YP_004750527.1| ISAtc1-like protein [Acidithiobacillus caldus SM-1]
MVPEELFSLALGLVPPWLVDHVTFTVEEKRLDLHINFPKGSRFACSVCGEECPVHDTRDHTWRHMDFFQH
EAYLHARVPRVKCQEHGVHQISVPWAREGSRFTLLFEALIMTLVREMPVLTAARMVGETDKLLWRVIDHY
VPEARAAVDMANVHAVGVDETSSRHGHDYITLFVDLNARRLLFATPGKDAKTFEKFSADLQAHGGSAEAI
TDVSMDLSPAFQKGAAEHLPNAEITFDRFHLMKLVNEAVDDVRKGEVLTQPNLKKTRWLWLKNDCNLKMK
QKEKLQELLKDQNLKTAQAYQFRLTFQDIFTIKNRHQGATLLKAWLENARTSDLPPIVRVAYTIMNHWDG
VLRWFESQITNGILEGFNSLIQSAKAKARGYRTHKNFINMAYLILGKLDLRLPT
>gi|340783911|ref|YP_004750528.1| succinate dehydrogenase subunit A-like protein [Acidithiobacillus caldus SM-1]
MDKNFSETTVDIIVVGGGTAGPMAAIAAKEANRDLAVLLIEKANVKRSGAISMGMDGLNNAVIPGHASPE
QYVKEITIANDGIVDQSAILTYASKSFDMITRLDRMGVKFEKDETGDFNVKKVHHLGNYVLPMPEGHDMK
KILYRHLKKHRVEITNRLFVRLSG
>gi|340783912|ref|YP_004750529.1| gntR regulator-like protein [Acidithiobacillus caldus SM-1]
MHSTTSKRAAILAMQPLYLQIKDDIRANIVEGTYKADDKLPSEHEMVLMYNASRTTIRQSIKDLQNEGLV
YTIPGKGTFISRPKVSQTLLSLQGFGEAMSPNGHETYSTIISQRYGIADKLVQNKLRLTQSQIFELQRIR
YLDREPISLDVTYLPSDVGSKLENEDLTGKDLFMLLESRLGIALGNAEVQLEAILAGDNLAHLLNIEQGS
PILRMERLTYTSLGVPLDFEYLYYRGDYLKYSLLLSRHGG
>gi|340783913|ref|YP_004750530.1| invertase/recombinase-like protein [Acidithiobacillus caldus SM-1]
MALIGYARVSTADQDTALQADALKKAGCTRIFEDTASGAKSDRPGLAAALAYLRDGDVLVVWRLDRLGRS
LPHLIETIATLEAQGVGFRSLTEHIDTTTPGGRLIFHVFGALGQFERDLIRERTRAGLTAAAARGRKGGR
KPVMTPEKLQRAREYLANGLNVREAAARIKVSKTSLYAALQAARAVDS
>gi|340783914|ref|YP_004750531.1| hypothetical protein Atc_3p22 [Acidithiobacillus caldus SM-1]
MASPPRYELERWWVREWEKVLPEEGIFRFYRLALEQNLWGEWELTTSWGRIGRRPSRVLVRVLEDPAAAA
PILENVERVRRKREYVPVQATG
>gi|340783915|ref|YP_004750532.1| hypothetical protein Atc_3p23 [Acidithiobacillus caldus SM-1]
MVLDASALLAYLYEEPGADAVEHALSFGSSISAVNWAEVLSKAADIGIAPERLVSELRERGVLNNALKIF
PLIAEDGLEIARLRPLTQNLGLSLGDRACLALGKRLKLPVMTADRVWSAVPGMEIKLIR
>gi|340783916|ref|YP_004750533.1| hypothetical protein Atc_3p24 [Acidithiobacillus caldus SM-1]
MVPTDDHLWAFWYNGIFPKVGYREMNHSYTVHIDRRGRMVLPSRLRRQLGIEQDQILILELQEEGGIRLL
SQKQLAQGGRGLLRAMAPTTEKDRALSEELIAERRSAAARE
>gi|340783917|ref|YP_004750534.1| hypothetical protein Atc_3p25 [Acidithiobacillus caldus SM-1]
MKRKPDLSGIKQSLHRDPNDFLDGADSEQEKPAKHTLDGLVPRKPEPTVQKLFRLRWDVANALKMEAARS
SVELGRRVTETEIVEELIRQRCGIIDS
>gi|340783918|ref|YP_004750535.1| plasmid partitioning-like protein [Acidithiobacillus caldus SM-1]
MAIFACVNTKGGVGKTTTAVHLAAMLAIHNPTLLIDGDPQASAASWAAWRRDNTDFKSSPTTTCLVGKAI
VSEGRQLSQGFAHTVVDAGGRDSVGLRSALLLAQEAIVPVGASNLDAAAMTDLLTVVDMAKDYNPDLRVR
ILLTRLDPRTKDVIDMLSFLKEQELEVFNTTVCERVVYRRAVGDGATVHEIGKDRAAIAEMDAFLKEATS
>gi|340783919|ref|YP_004750536.1| plasmid replication-like protein [Acidithiobacillus caldus SM-1]
MCASRARHVFGQYGLDLWGPNEHYDLLHREQRGAVILWERAILGGKRWIKLKPNDPRIPEMLRAQEGQND
AYITPNEFDGWRLVRLLRSLRACYVDLDGCTDIEAVLDALSARQLPCPSFILLSGRGLHLYWLLEAVPAQ
ALPVWQRIQDALIAALVDLGADSAAKDCTRLLRLAGTRNSKNAVEIVGHIFDGHRWSLRQLAFEVLGRDG
KGRRPAEVRDLRAKRKGPDRAIQGSIYARWLLVFQDLIRISEHHRHDIPEGHRDKWLFLCGAALSWFTHP
QGIAAEIASLGRLHTGLDPQEILSTTKPNLERAIDAAAGKKLTWNGQEVDPRYRFKRQTLYDWLSPIIPD
NIFPELRAIVPDELARERRKPHDNRQRNRAAEGRYRDSYTKAGVRVSNQDKRAQAQVMRAQGQSYRQIAE
GLGISHETARLWSKSVK
>gi|340783920|ref|YP_004750537.1| hypothetical protein Atc_3p28 [Acidithiobacillus caldus SM-1]
MKNQIRIKPAISMANAMKASALLAVSAALLSGCSAIGGNDSAYRAAMQTYLESVMKSDNGSPQTAFCLSV
YSGGTGTDYSSDCNSEVAKGYSFATPVSQLKNQNLIALESAGLIHIGKQFDCVVKGIGFFGPAPVYHYPV
IPVKMNKGATYVDNFGGQKICFGGVKVAHVLSATKPHFNSKYSMKTSVVRFSVGYSGISMDLVKKSPDLK
KKILGDRHESVREAMRKSEIVTAVLGKESSNHWKVLKLVSAKPA