LOCUS NC_015424 4551783 bp DNA circular BCT 05-JUL-2011 DEFINITION Aeromonas veronii B565 chromosome, complete genome. ACCESSION NC_015424 VERSION NC_015424.1 GI:330827700 DBLINK Project: 66323 KEYWORDS . SOURCE Aeromonas veronii B565 ORGANISM Aeromonas veronii B565 Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas. REFERENCE 1 (bases 1 to 4551783) AUTHORS Li,Y., Liu,Y., Zhou,Z., Huang,H., Ren,Y., Zhang,Y., Li,G., Zhou,Z. and Wang,L. TITLE Complete Genome Sequence of Aeromonas veronii Strain B565 JOURNAL J. Bacteriol. 193 (13), 3389-3390 (2011) PUBMED 21551296 REFERENCE 2 (bases 1 to 4551783) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-APR-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4551783) AUTHORS Li,Y., Liu,Y., Zhou,Z., Huang,H., Ren,Y., Zhang,Y., Li,G., Zhou,Z. and Wang,L. CONSRTM The Key Laboratory of Molecular Microbiology and Technology, Ministry of Education & Feed Research Institute, Chinese Academy of Agricultural Sciences TITLE Direct Submission JOURNAL Submitted (18-MAR-2011) TEDA School of Biological Sciences and Biotechnology, Nankai University, 23 Hongda Street, TEDA, Tianjin 300457, China COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002607. Source DNA and Bacteria are available from the Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..4551783 /organism="Aeromonas veronii B565" /mol_type="genomic DNA" /strain="B565" /db_xref="taxon:998088" gene 221..1591 /locus_tag="B565_0001" /db_xref="GeneID:10490088" CDS 221..1591 /locus_tag="B565_0001" /codon_start=1 /transl_table=11 /product="chromosomal replication initiator protein DnaA" /protein_id="YP_004390653.1" /db_xref="GI:330827701" /db_xref="GeneID:10490088" /translation="MTASLWQQCLNRLQDELPSAEFSMWIRPLQAELSDNTLTLYAPN RFVLDWVRDKYLIRVNGIINELCGVDGPALRFDIGNRPHPVAVARAPVQGAAPVNNLQ KSWESKAEAKPEPNHKSNTNVNYTFENFVEGKSNQLARAAARQVADNPGGAYNPLFLY GGTGLGKTHLLHAVGNAIKESKKDAKVIYMHSERFVQDMVKALQNNAIEEFKRYYRSV DALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFG WGLTVAIEPPELETRVAILMRKADENQIHLPDEVAFFIAKRLRSNVRELEGALNRVIA NANFTGRAINIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKLADLLSKRRSRSV ARPRQLAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLKEESHDIKEDYSNL IRTLSS" misc_feature 221..1588 /locus_tag="B565_0001" /note="chromosomal replication initiation protein; Reviewed; Region: dnaA; PRK00149" /db_xref="CDD:178902" misc_feature <224..>424 /locus_tag="B565_0001" /note="hypothetical protein; Validated; Region: PRK06672" /db_xref="CDD:180654" misc_feature 626..1057 /locus_tag="B565_0001" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 701..724 /locus_tag="B565_0001" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(704..727,890..892,992..994) /locus_tag="B565_0001" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature <869..1279 /locus_tag="B565_0001" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 878..895 /locus_tag="B565_0001" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 1028..1030 /locus_tag="B565_0001" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 1313..1582 /locus_tag="B565_0001" /note="C-terminal domain of bacterial DnaA proteins. The DNA-binding C-terminal domain of DnaA contains a helix-turn-helix motif that specifically interacts with the DnaA box, a 9-mer motif that occurs repetitively in the replication origin oriC. Multiple...; Region: Bac_DnaA_C; cd06571" /db_xref="CDD:119330" misc_feature order(1382..1384,1406..1411,1430..1432,1448..1456, 1481..1495,1502..1504,1511..1516) /locus_tag="B565_0001" /note="DnaA box-binding interface [nucleotide binding]; other site" /db_xref="CDD:119330" gene 1675..2778 /locus_tag="B565_0002" /db_xref="GeneID:10485919" CDS 1675..2778 /locus_tag="B565_0002" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit beta" /protein_id="YP_004390654.1" /db_xref="GI:330827702" /db_xref="GeneID:10485919" /translation="MQLEISREALLRPLQLVSGALGGRPTLPILGNVLLDVSNGLLSL TGTDLEVEMIGQVYLNGASEDGRTTVPARKLLDICRGLPEGAEIRLNTEGERLIIRSG RSRFNLSTLPATEYPNIEDWESVLEFDISQLELKKLIDATQFSMASQDVRYYLNGMLF ESEGHGLRTVATDGHRLATCRREVVGESLPDHQVILPRKGVLELVRLLEAEDKPVRLQ IGRSNLRAALDGFIFTSKLVDGRFPDWRRVIPRNSDKALIAGREDLRQAFARAAILSN EKFRGVRLNLQENLLRITANNPEQEEAEELLDVQYAAGEMEIGFNVSYVLDVLNTLKC DQIRISLSDSISSAIIEDFEHQDAQYVVMPMRI" misc_feature 1675..2775 /locus_tag="B565_0002" /note="DNA polymerase III subunit beta; Validated; Region: PRK05643" /db_xref="CDD:180180" misc_feature 1675..2772 /locus_tag="B565_0002" /note="Beta clamp domain. The beta subunit (processivity factor) of DNA polymerase III holoenzyme, refered to as the beta clamp, forms a ring shaped dimer that encircles dsDNA (sliding clamp) in bacteria. The beta-clamp is structurally similar to the...; Region: beta_clamp; cd00140" /db_xref="CDD:29053" misc_feature order(1744..1746,1891..1893,1912..1914,2269..2271) /locus_tag="B565_0002" /note="putative DNA binding surface [nucleotide binding]; other site" /db_xref="CDD:29053" misc_feature order(1894..1896,1903..1905,1981..1983,1987..1989, 2491..2493,2584..2589) /locus_tag="B565_0002" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29053" misc_feature order(2188..2190,2194..2205,2635..2637,2761..2772) /locus_tag="B565_0002" /note="beta-clamp/clamp loader binding surface; other site" /db_xref="CDD:29053" misc_feature order(2188..2190,2194..2199,2416..2418,2521..2523, 2560..2565,2644..2646,2761..2772) /locus_tag="B565_0002" /note="beta-clamp/translesion DNA polymerase binding surface; other site" /db_xref="CDD:29053" gene 2781..3884 /locus_tag="B565_0003" /db_xref="GeneID:10485920" CDS 2781..3884 /locus_tag="B565_0003" /codon_start=1 /transl_table=11 /product="DNA replication and repair protein recF" /protein_id="YP_004390655.1" /db_xref="GI:330827703" /db_xref="GeneID:10485920" /translation="MSLVKLQLSDFRNIQQASLKLSPGLNILVGCNGSGKTSVLEAIH YLGLGRSFRTHLTGRVIRQGERAFTLFAQCELEGRQVPIGLAKDKSGETQLKIAGAQA QRLADLVELLPVQLIHPDGFNLLTGGPQARRAWLDWGVFHQEPTFFALWGRVRRLLKQ RNALLRQSTQYRQLAFWDQELVRLGGELAEFRASYCQAITPLIKEMTADFLPEFDISL GFYRGWEKDTPLGDLLEAGFERDRALGYTGVGPQKADVRLKANGVPAQDILSRGQLKL LVCAMRLAQGLYLNQHSSRGCIFLIDDFASELDVDKRRLLAARLKQCASQVFITAIDT GQLADMMDANDCKLFHVEQGKISETLEKAESKL" misc_feature 2781..3854 /locus_tag="B565_0003" /note="recombination protein F; Reviewed; Region: recF; PRK00064" /db_xref="CDD:178835" misc_feature 2787..>3278 /locus_tag="B565_0003" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 2868..2891 /locus_tag="B565_0003" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(2877..2882,2886..2894,3135..3137) /locus_tag="B565_0003" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 3126..3137 /locus_tag="B565_0003" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature <3495..3851 /locus_tag="B565_0003" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 3585..3614 /locus_tag="B565_0003" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 3672..3689 /locus_tag="B565_0003" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 3696..3707 /locus_tag="B565_0003" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 3765..3785 /locus_tag="B565_0003" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene 3881..6292 /locus_tag="B565_0004" /db_xref="GeneID:10485921" CDS 3881..6292 /locus_tag="B565_0004" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit B" /protein_id="YP_004390656.1" /db_xref="GI:330827704" /db_xref="GeneID:10485921" /translation="MSENTYDSSNIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEV VDNSIDEALAGYCSDILVKIHSDGSVSVRDNGRGIPVDMHEEEGRSAAEVIMTVLHAG GKFDDNSYKVSGGLHGVGVSVVNALSDKLLLTIRRNGHVYEQTYHLGEPQAPLKQIGD STGTGTEVRFWPSPAIFSDTLFHYEILAKRLRELSFLNSGVSIRLQDERDGREAHFCY EGGIKAFVEYLNQNKTPIHPKVFHFTTEQDGIGVEVAMQWNDAYQEGVYCFTNNIPQR DGGTHLVGFRTALTRTLNSYMDKEDYSKKAKSAASGDDVREGLIAVISVKVPDPKFSS QTKDKLVSSEVKTAVEQAMGEKLADFLLENPGDAKIVVNKIIDAARAREAARKARELT RRKGALDIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKI LNVEKARFDKMISSQEVGTLITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGAHIRT LLLTFFYRQMPEIIERGYVYIAQPPLYKVKKGKQEQYLKDEDALLQYQTAMALDGATL HVNESAPAIGGEALERLVNQHRSVSHLITRMSRRAPEAVLTQLIYQPELNEALLNSES DLLVWCQGMEAVLNESNHGIQYQIQVRRDEERSLYVPHAVVRQHGVDREYPLSYDFLQ SGEYRQLVSLGKEIANLIEEGGFIKRGEKVKPVANFVEAVEWLMGEGKRGIYIQRYKG LGEMNPDQLWETTMDPEARRMLRVTIDDAVGADQLFSTLMGDAVEPRRDFIETNALRV ANLDV" misc_feature 3881..6289 /locus_tag="B565_0004" /note="DNA gyrase subunit B; Provisional; Region: gyrB; PRK14939" /db_xref="CDD:184903" misc_feature 3977..>4213 /locus_tag="B565_0004" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cl00075" /db_xref="CDD:193644" misc_feature 4538..5011 /locus_tag="B565_0004" /note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having a ribosomal S5 domain 2-like fold, of the type found in proteins of the type IIA family of DNA topoisomerases similar to the B subunits of E. coli DNA gyrase and E. coli Topoisomerase IV which are...; Region: TopoII_Trans_DNA_gyrase; cd00822" /db_xref="CDD:48467" misc_feature 4691..4693 /locus_tag="B565_0004" /note="anchoring element; other site" /db_xref="CDD:48467" misc_feature order(4865..4867,4874..4879,4883..4885) /locus_tag="B565_0004" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48467" misc_feature order(4883..4885,4889..4891) /locus_tag="B565_0004" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:48467" misc_feature 5132..5476 /locus_tag="B565_0004" /note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in proteins of the type IIA family of DNA topoisomerases similar to the Escherichia coli GyrB subunit. TopoIIA enzymes cut both strands of...; Region: TOPRIM_TopoIIA_GyrB; cd03366" /db_xref="CDD:173786" misc_feature order(5150..5155,5162..5164,5372..5374,5378..5380, 5384..5386) /locus_tag="B565_0004" /note="active site" /db_xref="CDD:173786" misc_feature order(5150..5152,5372..5374) /locus_tag="B565_0004" /note="putative metal-binding site [ion binding]; other site" /db_xref="CDD:173786" misc_feature 6062..6256 /locus_tag="B565_0004" /note="DNA gyrase B subunit, carboxyl terminus; Region: DNA_gyraseB_C; pfam00986" /db_xref="CDD:189792" gene complement(6405..7355) /locus_tag="B565_0005" /db_xref="GeneID:10485922" CDS complement(6405..7355) /locus_tag="B565_0005" /codon_start=1 /transl_table=11 /product="AraC-like transcriptional regulator" /protein_id="YP_004390657.1" /db_xref="GI:330827705" /db_xref="GeneID:10485922" /translation="MPTPIVAVVTFDHFSPFHCAVPCLIFGDILPGQPLFELMICCGD GNPHSRSAQGFTIQAPHGLEVLAEAEIIVIPFWHDPAARPPAQLLNALIAARARGARL VGLCLGTYVLAYAGLLNGRKASTHWEYEQDFCHRFPCVQLDTNALYVDDEGLVTSAGT AAGLDCCLYLVRQYHGSAIANKVARRLVIPPHREGGQAQFIEQPVPTSTRDVRMNQLL DHLRAHLAEPHTLDSLAAHTLMSRRTFTRRFHQATGLSVGEWLLAERLRRSQELLEVS GHSIDRIAELVGFKSATSLRNHFRARFSISPSEWRRSFRG" misc_feature complement(6408..7355) /locus_tag="B565_0005" /note="transcriptional activator FtrA; Provisional; Region: ftrA; PRK09393" /db_xref="CDD:181818" misc_feature complement(6786..7340) /locus_tag="B565_0005" /note="AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain; Region: GATase1_AraC_1; cd03137" /db_xref="CDD:153231" misc_feature complement(7038..7040) /locus_tag="B565_0005" /note="conserved cys residue [active]" /db_xref="CDD:153231" misc_feature complement(6420..6530) /locus_tag="B565_0005" /note="Bacterial regulatory helix-turn-helix proteins, AraC family; Region: HTH_AraC; pfam00165" /db_xref="CDD:143933" gene complement(7447..8217) /locus_tag="B565_0006" /db_xref="GeneID:10485923" CDS complement(7447..8217) /locus_tag="B565_0006" /codon_start=1 /transl_table=11 /product="Zn-dependent hydrolase-like protein" /protein_id="YP_004390658.1" /db_xref="GI:330827706" /db_xref="GeneID:10485923" /translation="MKITLVRNATLLLDYAGTRFLIDPMLSAKGAFPGFEGTANSHLR NPLVELPLPIDELVDVDAVIVTHDHPDHWDDAARALIPKHLPLLVQHKKDADAIRASG FEDVRLLSDQPEFAGIRLQQTGGQHGSDPLMAVLGERMGEVCGVVFSHPNEQSLYLAG DTIWHPSVEQALQQHQPEVIILNCGDAQVPGLGSIIMGKEDVAAVYQAAPQATLIASH MEAVNHAVLSRQELRNYLAKRGMTDRVRVPQDGEAISL" misc_feature complement(7525..8217) /locus_tag="B565_0006" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" gene 8498..8911 /locus_tag="B565_0007" /db_xref="GeneID:10485924" CDS 8498..8911 /locus_tag="B565_0007" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit B" /protein_id="YP_004390659.1" /db_xref="GI:330827707" /db_xref="GeneID:10485924" /translation="MRSIDFSPLYRSAIGFDRLANLIESAASNGNAGYPPYNIEQLGD NDYRISMAVAGFTQEELELSFQENLLTVKGNKQADTGRNYLYQGIAERGFERRFQLAD YVRVKGADLKNGLLHIELVREVPEAMKPRKIEING" misc_feature 8498..8905 /locus_tag="B565_0007" /note="Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]; Region: IbpA; COG0071" /db_xref="CDD:30420" misc_feature 8600..8863 /locus_tag="B565_0007" /note="Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins. IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein...; Region: ACD_IbpA-B_like; cd06470" /db_xref="CDD:107227" misc_feature order(8606..8620,8645..8647,8651..8653,8657..8662, 8783..8785,8837..8842) /locus_tag="B565_0007" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:107227" gene 9004..9444 /locus_tag="B565_0008" /db_xref="GeneID:10485925" CDS 9004..9444 /locus_tag="B565_0008" /codon_start=1 /transl_table=11 /product="16 kDa heat shock protein A" /protein_id="YP_004390660.1" /db_xref="GI:330827708" /db_xref="GeneID:10485925" /translation="MRNLDFSHLYSNAVGFERMARELEGLFEQKTVAYPPYNIEKRDQ DGYRITVAVAGFEREELELETENGTLKVKGRKGAAAGERQFLHQGIAERDFELAFKLS QHVEVQGAKLEHGLLTIDLARELPEALKPRAIPIGKPDQLALPG" misc_feature 9004..9411 /locus_tag="B565_0008" /note="Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]; Region: IbpA; COG0071" /db_xref="CDD:30420" misc_feature 9106..9372 /locus_tag="B565_0008" /note="Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins. IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein...; Region: ACD_IbpA-B_like; cd06470" /db_xref="CDD:107227" misc_feature order(9112..9126,9151..9153,9157..9159,9163..9168, 9292..9294,9346..9351) /locus_tag="B565_0008" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:107227" gene complement(9516..10766) /locus_tag="B565_0009" /db_xref="GeneID:10485926" CDS complement(9516..10766) /locus_tag="B565_0009" /codon_start=1 /transl_table=11 /product="class I and II aminotransferase" /protein_id="YP_004390661.1" /db_xref="GI:330827709" /db_xref="GeneID:10485926" /translation="MEFSLFGEKFTRHAGITQLMDDLNQGLTNPDAIMLGGGNPAPIP AMLERFQAEAKSLLDNGELVKAMANYDGPQGKDRFTKALASLLSKELGWDISARNIAL TNGSQNAFFYLFNLLAGEFADGRKKKVLFPLAPEYIGYADSALTDDYFVAYKPTIEKL PDGQFKYHVDFESLQVGDDIGVICVSRPTNPTGNVLTDEEIEHLDQIARDKGIPLLID NAYGVPFPGIIFSEAKPFWNANTILCMSLSKLGLPGTRCGIVIADEKIIQAITNLSGI INLAPGSLGPAITIPMIESGDIITLSEQVVKPFYQQKAELAVQLLREAIPDQRFHIHK PEGALFLWLWFEGLPLHCQELYERLKAKNLLIVPGHYFFPGIDDPEWRHSQECIRLNY SQSEELVRRGIAILADEINTLYAG" misc_feature complement(9543..10670) /locus_tag="B565_0009" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature complement(order(9999..10001,10020..10025,10029..10031, 10104..10106,10197..10199,10356..10358,10446..10454)) /locus_tag="B565_0009" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(9903..9905,9912..9914,9999..10007, 10125..10127,10308..10310,10443..10445)) /locus_tag="B565_0009" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(10020..10022) /locus_tag="B565_0009" /note="catalytic residue [active]" /db_xref="CDD:99734" gene complement(11222..12046) /locus_tag="B565_0010" /db_xref="GeneID:10485927" CDS complement(11222..12046) /locus_tag="B565_0010" /codon_start=1 /transl_table=11 /product="putative AraC/XylS family transcriptional regulator" /protein_id="YP_004390662.1" /db_xref="GI:330827710" /db_xref="GeneID:10485927" /translation="MAFILPDHPFDPDQLTGSVIGIASALGWHDSGLHQHQRHQLLFA QSGCMTMELEGRVCLLPPTRAAWLPAGTAHRVLMRGVVAYRSLYFQPHPELPGTVEVL AVNPLLHELIERMALWPWDKPQEQLQRTIALFMEELGLAPRESWQLPLPTDPRLGDWL QQLKRGNALPDRLNRLAERVGASDKTIGRIFMRETGMSYQAWRQQWRLLRAMELLAES ESISRIAAALEFSSDSAFISFFKQHTGQTPLRYLSSRGESPQPGSLPPPGYPAPAA" misc_feature complement(11291..11539) /locus_tag="B565_0010" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:128636" gene 12139..13266 /locus_tag="B565_0011" /db_xref="GeneID:10485928" CDS 12139..13266 /locus_tag="B565_0011" /codon_start=1 /transl_table=11 /product="multidrug resistance protein D" /protein_id="YP_004390663.1" /db_xref="GI:330827711" /db_xref="GeneID:10485928" /translation="MNNKLPPLWLVVGLMMFPQIVETIYSPVLTHIATQFRVSEGQAS QTLSVYFLAFAVGVVCWGRLCDLIGRRPAMLAGLLTYGVGTLLALLANQFETLLLARV ISAFGAAVGSVVTQTMLRDSYQGSDLARVFSVMGIALSLSPVLGLLSGGQLASGFGYL GVFSGLLVLAVGLLLVTCWQLPETRPVTTQRVALWPLACRMMKDGGLWRSAMLVALFN TMLFGYYSLAPFLFAGLGLSTGEFGYSGILLALATLLGSLLNKHLLGRGWLPSSLVRL ACALALVAGLLVWATQASLWFLLPMMGVVIAFGLAIPNVLSQALLAYREVAGSAGALF GLGYYLLLSLGLAVAAGLQDLGLLLSGCGLLALICSGRRST" misc_feature 12160..>12552 /locus_tag="B565_0011" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" gene complement(13271..13954) /locus_tag="B565_0012" /db_xref="GeneID:10485929" CDS complement(13271..13954) /locus_tag="B565_0012" /codon_start=1 /transl_table=11 /product="KDP operon transcriptional regulatory protein KdpE" /protein_id="YP_004390664.1" /db_xref="GI:330827712" /db_xref="GeneID:10485929" /translation="MAHILVIDDEAAIRRFLRISLIAEGHQVSEAVGVNEGLEQYRHL NPDLVILDLGLPDGDGIQVLQAIREHHPNPVLVLSARDSEQEKVRLLDAGANDYMSKP FGIGEMMARIRVLLRQRAGVSSGERRHFPQCGLTLDISSHKVTMKEEEIPLSRKEFAL LQALVCHPGKLVMQTQLLNDIWGPSHKEDTHYLRIVIASLRKKLGDNPQQPTLIETES GIGYRFIGN" misc_feature complement(13280..13954) /locus_tag="B565_0012" /note="DNA-binding transcriptional activator KdpE; Provisional; Region: PRK10529" /db_xref="CDD:182522" misc_feature complement(13607..13942) /locus_tag="B565_0012" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(13649..13654,13661..13663,13718..13720, 13775..13777,13799..13801,13928..13933)) /locus_tag="B565_0012" /note="active site" /db_xref="CDD:29071" misc_feature complement(13799..13801) /locus_tag="B565_0012" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(13775..13783,13787..13792)) /locus_tag="B565_0012" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(13646..13654) /locus_tag="B565_0012" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(13283..13555) /locus_tag="B565_0012" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cd00383" /db_xref="CDD:29475" misc_feature complement(order(13292..13294,13307..13309,13343..13348, 13370..13372,13379..13381,13433..13438,13493..13495)) /locus_tag="B565_0012" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29475" gene complement(14013..16601) /locus_tag="B565_0013" /db_xref="GeneID:10485930" CDS complement(14013..16601) /locus_tag="B565_0013" /codon_start=1 /transl_table=11 /product="two-component system potassium sensor histidine kinase KdpD" /protein_id="YP_004390665.1" /db_xref="GI:330827713" /db_xref="GeneID:10485930" /translation="MRDEVRADALLASLEQEHKGKLKVFLGAAPGVGKTYAMLQAVRE QAKEGVDILIGVVETHGRQETLALLDKLAIMPRKIHMHRQQRLEEMDLDGLLARKPAI AVVDELAHSNAPGSRHEKRWQDVEELLNAGIDVYTTLNVQHLESLNDLVWQLTGVRVK ETLPDQVLLEADSLVLIDLPPKELLGRLKEGKVYVPHQAKAALQSFFSLNNLTALREL AMQTAASHVEGDLQLQWQAAGKSTLPLRGKLMVCLGDLHGSALVRYGHRFAQRRQLPW LVVHVDSNGRRSADVEQALALASHLGAKVLTLSSPAVANTLLETAEQQQVSQLLLGKP HKAPWRRSLVQHLLKQAQGLEITLVDTEKQKPEVGMRVPTPKDIHHSLLAVTIMGITS AAAWGLSYWLPPAALPLIFVLGVLATALTTSLVPATLAAVLGFIAHNLLFTAPYFSLS VANHSDLLTLFVLLIVGMTAGRLASRQRQQLIGLRETQQLGNALLSLSQGLATASSPE EVLRQGAQAISLALGQPTVVIDKEFNDRLGNEKHRPGQTDKAAIDWCLAQKQSAGAHT ATLNAAEAQYHHLSDDLVIGITLANPLSSSAEHQLQALLTDIRAALARIDLNERLADS QLQAETDRMRAALLSSVSHDLKTPLATIMGAGSTLLEYGDRIPAEDRDELLHSVQEEA RRLHSYVQNLLDMTRIGSPDFQLKRDWVDLADLVESARKRLDSSWRQHKLRVHFDQHV PQLYVHGALIEQVLVNILDNASRYSPAGTPIEFKVMVAEPDLIIDIIDIGVGIAESDR EKIFNLFYTQPVGDCGSRGTGLGLAISRAMIEAHGGKIWAFSGPNGNGTCMRISLPLA LNSPEV" misc_feature complement(14019..16586) /locus_tag="B565_0013" /note="Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]; Region: KdpD; COG2205" /db_xref="CDD:32387" misc_feature complement(15921..16553) /locus_tag="B565_0013" /note="Osmosensitive K+ channel His kinase sensor domain; Region: KdpD; pfam02702" /db_xref="CDD:145711" misc_feature complement(15525..15860) /locus_tag="B565_0013" /note="USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium...; Region: USP_OKCHK; cd01987" /db_xref="CDD:30174" misc_feature complement(order(15570..15578,15597..15602,15606..15611, 15759..15761,15843..15848)) /locus_tag="B565_0013" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30174" misc_feature complement(14511..14711) /locus_tag="B565_0013" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature complement(order(14526..14528,14538..14540,14547..14549, 14559..14561,14568..14570,14580..14582,14637..14639, 14646..14648,14658..14660,14667..14669,14679..14681, 14691..14693)) /locus_tag="B565_0013" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature complement(14673..14675) /locus_tag="B565_0013" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature complement(14043..14354) /locus_tag="B565_0013" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(14055..14057,14061..14066,14082..14084, 14088..14090,14136..14147,14223..14228,14232..14234, 14238..14240,14244..14246,14313..14315,14322..14324, 14334..14336)) /locus_tag="B565_0013" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(14322..14324) /locus_tag="B565_0013" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(14139..14141,14145..14147,14226..14228, 14232..14234)) /locus_tag="B565_0013" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(16728..17255) /locus_tag="B565_0014" /db_xref="GeneID:10485931" CDS complement(16728..17255) /locus_tag="B565_0014" /codon_start=1 /transl_table=11 /product="potassium-transporting ATPase, C chain" /protein_id="YP_004390666.1" /db_xref="GI:330827714" /db_xref="GeneID:10485931" /translation="MIAIRTLLTLTLLLGVGYPLAVTGLAQLLFPWQANGSQLTDSKQ QLIGSALLGQKFERADYFHPRPSASDFNTIGGSASNLGMSSPLRAEFAEQAAKAQPGT SSPAMLTRSASGLDPHLPLDAVLAQVDRVAKERGLDPAQLTEQVKSATQAGILGPQVV NILQLNLQLEHQKGA" misc_feature complement(16785..17213) /locus_tag="B565_0014" /note="K+-transporting ATPase, c chain; Region: KdpC; cl00944" /db_xref="CDD:186274" gene complement(17318..19357) /locus_tag="B565_0015" /db_xref="GeneID:10485932" CDS complement(17318..19357) /locus_tag="B565_0015" /codon_start=1 /transl_table=11 /product="potassium-transporting ATPase subunit B" /protein_id="YP_004390667.1" /db_xref="GI:330827715" /db_xref="GeneID:10485932" /translation="MSTDTMLVKGKKQKSQIIQAMVEALYRFNPKALFGSPILFTLWL AAVMATVESLLGQPFSGVAPSLAWQLTAWLWLTLWFANFAETLAEGRGKARADSLKAG MSQLKARRVANAKDGQGEWVPATSLMKGDLVLVRSGEMIPADGEVIAGIASVNEAAIT GESAPVIRESGTDRSGVTGNTTVVSDEIWVRVSNNPGESTLDRMIALVEGAKRQKTPN EMALDALLVGLTLIFLLVVATLPWFLDYNGTQVPRLYLIALFITLIPTTIGGLLSAIG IAGMDRLVKLNVIAKSGRAVEAAGDVRTLLLDKTGTITFGNRMADELIPAPGVDPALL AQAAMLASLGDNTPEGKSILTLASKSMAKPSQLESDKVIPFSAETRLSGLDRNGHQYR KGAVDAVLNYLSLDRKAVPELVLKSVDSIARQGGTPLLVCTHEQLLGVVYLKDIIKPG IKARFQILRHMGIRTVMITGDNPKTAAAIAAEAGVDDFIAEATPEKKLAYIRQEQADG RLVAMCGDGANDAPALAQADVGLAMNEGTQAAKEAGNLVDLDSNPTKLLDVVLVGKQL LVTRGALTTFSIANDVAKYFAILPALFIAAYPQLGALNLMQLGSPQSAILSAIIFNAL IIVALVPLALRGVDLKGSAASLLRRNLLIYGVGGLLVPFIGIKLIDLVITGLGLV" misc_feature complement(17321..19318) /locus_tag="B565_0015" /note="potassium-transporting ATPase subunit B; Provisional; Region: PRK01122" /db_xref="CDD:179229" misc_feature complement(18464..19105) /locus_tag="B565_0015" /note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122" /db_xref="CDD:189402" misc_feature complement(17786..18082) /locus_tag="B565_0015" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" gene complement(19443..21137) /locus_tag="B565_0016" /db_xref="GeneID:10485933" CDS complement(19443..21137) /locus_tag="B565_0016" /codon_start=1 /transl_table=11 /product="potassium-transporting ATPase A chain" /protein_id="YP_004390668.1" /db_xref="GI:330827716" /db_xref="GeneID:10485933" /translation="MWQEIIYPVAFVLLVLLPAPLLGNYIYRVFEGKIRWLAPVERAT LACCGTDGREQDWKSYALSLLAFNGAGFGLLFLILMAQGLLPLNPQQLPGLSWQLAFN TAVSFMTNTNWQAYSGEASLSYFSQMVGLTTQNFVSAGTGAAVAIALFRGIARQQTIN LGNFWQDLVRFCLYVLLPIALIMALVLVWQGVPQSLSAYLSFHGVEGQEQLLPLGPAA SQIAIKQLGSNGGGFFGINSAHPFENPTALSNWLEMVALLTIAAAMVFTLGRYVKDMA HSRAILGAMTLMLVLGLFVSLSQELKPDPALAQLTTDASNMAGNWEGKESRFGPVLSS IWEVATTAASNGAVNAMHDSFTPLGGMVGMINMLLGEVIFGGVGSGIYGMMLFVLLTV FLCGLMVGRTPTYLGKRLGITEMKWVVASMLVMPVGVLVIGGVTLLMPDASSIIGHDG PHGLSRLIYAYASAAGNNGSAFAGFAAGDNWQCIAIGLAMLLGRFGYIIPVLAIAGQL ARAPRQETSVGDFPISGPLFVTLLIITVLLIGGLSFLPVLALGPVAEHLSLIGGAF" misc_feature complement(19455..21137) /locus_tag="B565_0016" /note="K+-transporting ATPase, A chain [Inorganic ion transport and metabolism]; Region: KdpA; cl00903" /db_xref="CDD:186248" misc_feature complement(19461..21071) /locus_tag="B565_0016" /note="Potassium-transporting ATPase A subunit; Region: KdpA; pfam03814" /db_xref="CDD:112618" gene complement(21698..23047) /locus_tag="B565_0017" /db_xref="GeneID:10485934" CDS complement(21698..23047) /locus_tag="B565_0017" /codon_start=1 /transl_table=11 /product="glutathione reductase Gor" /protein_id="YP_004390669.1" /db_xref="GI:330827717" /db_xref="GeneID:10485934" /translation="MAQHFDYIAIGGGSGGIASANRAAMYGKKVALIEAKELGGTCVN VGCVPKKAMWYAGQIADALKYGADYGFDTTLNHFNWAKLVESRQAYIGRIHQSYQNVL GKNQITVIKGFARFVSSNTIEVNGEHYTADHILIATGGRPEIPAIPGAELGIDSDGFF DLQSQPKRVAVVGAGYIAVEIAGVMQALGSETHLVVRKHAPLRNFDPMIHETLVEIMA QEGPKLHTHAIPKAVLKNADNSLTLQLEDGRHLTVDCLIWAIGRVPATDNLNLAAAGI ALDEKGFIPTDKFQNTTVANIYAVGDNTGRIQLTPVAVAAGRRLSERLFNNKPNEHLN YDLVPTVVFSHPPIGTIGLTEPEAIAEYGEDQVKVYRSQFTAMYSALTQHRQPTRMKL VCVGPEEKVVGLHGIGFAMDEILQGFGVAMKMGATKADFDNCVAIHPTSAEEFVTMR" misc_feature complement(21701..23047) /locus_tag="B565_0017" /note="glutathione reductase; Validated; Region: PRK06116" /db_xref="CDD:180410" misc_feature complement(22304..22546) /locus_tag="B565_0017" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(21701..22036) /locus_tag="B565_0017" /note="Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Region: Pyr_redox_dim; pfam02852" /db_xref="CDD:190451" gene complement(23124..25091) /locus_tag="B565_0018" /db_xref="GeneID:10485935" CDS complement(23124..25091) /locus_tag="B565_0018" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /protein_id="YP_004390670.1" /db_xref="GI:330827718" /db_xref="GeneID:10485935" /translation="MSGLFSKTARAVGRNGLSYRLLSYILVCSTVLAMIITALQLAWD YRKDVAVIEDSIGQIEASFLQPIAASLWNLDEEQVKVQIEGIMNLPNMQFVMVKEMLG NSEVPLLTQGVERESYDISREFNLTYQGEIVGKLFVAASLEQIYQRLIEKSVLIMVSQ TIKTLVVSFCILIIIYYLVVRHINRIANYAQKFNLDRLDMALELEGRPQPRKKPDELD TLVSTLNQMRTRLRDELVARHQAVEQLQKERDFSATLINSANMVICCMEPDLTIASIN PAAILLTGYHQQELLQHNWLDLFVSPAQREELNDILAAEGSLADKEVIMHDQQAHELV LQWTFVPFYDGPNLKYQIGFGYDITQLKKVEREIIQLNEQLEGKVVERTRSLSEANNQ LGKAYDDLKQAQQTLVESEKMASLGSLVAGVAHEINTPIGISVTASSYLQERVADFKS HIESKQLSRSYLNEFTVNLDESMQLLQSNLRRASELIASFKQVAVDQSSEARYNFSLA DNLHQVVVSLGHKLKKSQCEVDIQCDPKLSIFSFPGSFTQIYSNLILNSINHGFDSWD KPKKITIKVEQQGEELFIDYSDNGRGIPPEILPRIFDPFVTSKRGQGGSGLGTHIIYN LVVQLLKGRISCASEPGQGAQFHIRLPIQHN" misc_feature complement(24393..24602) /locus_tag="B565_0018" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(24156..24335) /locus_tag="B565_0018" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature complement(24006..24323) /locus_tag="B565_0018" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:117025" misc_feature complement(23139..>24014) /locus_tag="B565_0018" /note="Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]; Region: COG4191" /db_xref="CDD:33926" misc_feature complement(23142..23450) /locus_tag="B565_0018" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(23154..23156,23160..23165,23178..23180, 23184..23186,23235..23246,23313..23318,23322..23324, 23328..23330,23334..23336,23415..23417,23424..23426, 23436..23438)) /locus_tag="B565_0018" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(23424..23426) /locus_tag="B565_0018" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(23238..23240,23244..23246,23316..23318, 23322..23324)) /locus_tag="B565_0018" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(25210..28290) /locus_tag="B565_0019" /db_xref="GeneID:10485936" CDS complement(25210..28290) /locus_tag="B565_0019" /codon_start=1 /transl_table=11 /product="RND multidrug efflux transporter" /protein_id="YP_004390671.1" /db_xref="GI:330827719" /db_xref="GeneID:10485936" /translation="MRFTDIFIKRPVLAISLSFLIALLGFQAIFKMQVREYPEVTNTV ITVSTGYYGASSDLIQGFITQPLEQAVAQADNIDFMTSSSQLGSSTITAYMKLNTDPN AALSDILAKVNSVRSQLPKEAEDPSVTSSTGSTTAVLYLGFTSPELNSSQITDYLERV IKPQLFTVGGVSKVDLYGGVEFALRVWLDPAKMAAFNLTASDVMTVLNSNNYQSATGQ ATGYFTLFNGNAETQVKDVDELKRLVVATRDGKVIRLSDIAKVTLEKSHDIYRASANG REAVVMAVNAAPTANPINIAHDVLALLPSLERNMPSTMRLNVMYDSTVAINESIHEVI KTILEAAAIVLVVITLFLGSFRAVIIPIITIPLSLIGVVMMMDMFGFSINLMTLLAMV LAIGLVVDDAIVVLENVDRHIKEGEEPFRAAIIGTREIAVPVIAMTVTLAAVYAPIAL MGGITGSLFKEFALTLAGAVFVSGIIALTLSPMMCSKMLKANEQPGKFESTVHHLLER MTDRYDSMLHAVMKKRPVIVVFAVIVFASLPLLFKFIPSELAPSEDKGVMAVLGTAPS NANLDYIENTMADVNKILDDQPEIAFSQVFSGVFNANQAFGIASMVPWSQREASQKEV LDRVANLVKDIPGMAITTFQFPELPGASSGLPIQFVITTPNSFESLFLVAGEILAAAQ SNGQFVYSDLDLNYDSATMKIRIDKDKAGAYGITMQDIGITMGTMMADGYVNRIDLDG RSYEVIPQVERKYRLNPESIKGYYVRAADGKSIPLGSLISIEVVGEPRALPHFNQLNS ATIGAVPAPGVAMGDAINWFQTTADEKLPQGYRYDFMGEARQFVTEGNALYATFALAL AIIFLVLAIQFESVRDPLVIMVSVPLAISGALIALAWGMATMNIYSQVGLITLVGLIT KHGILICEVAKEEQLLRGMNRMEAVMQAAKVRLRPILMTTAAMIAGLIPLLYAAGAGA AQRFSIGIVIVAGLAIGTLFTLFVLPVIYTYLASEHKPLPVFDETIPPKANGGH" misc_feature complement(25261..28290) /locus_tag="B565_0019" /note="multidrug efflux protein; Reviewed; Region: PRK09579" /db_xref="CDD:169983" misc_feature complement(26872..>27300) /locus_tag="B565_0019" /note="Protein export membrane protein; Region: SecD_SecF; cl14618" /db_xref="CDD:176628" gene complement(28306..29439) /locus_tag="B565_0020" /db_xref="GeneID:10485937" CDS complement(28306..29439) /locus_tag="B565_0020" /codon_start=1 /transl_table=11 /product="hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter,MFP subunit" /protein_id="YP_004390672.1" /db_xref="GI:330827720" /db_xref="GeneID:10485937" /translation="MKKWMAIMLLIAIALFGSVIGFNLFKQKMIAQYMANRPEPEFPV TAMVTKAQDWVPTIEAIGFIEPNQGVTLSTELAGTIDAITFESGKPVKADQLLLSLDS TVERANLRASQAKLPAAKAKFDRFQNLYKTSSISKEQLDEAEAAYRSLEADIESLKAT IARREVRAPFSGVVGLRNVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQTDISKIKLGQ TIKINVDAYPQTQFDGHITAIEPAVNFQSGLIQVQADIPNNDGQLRSGMFARASIILP TVKDQIVIPQTAISFTLYGQNVYVLKEGEETDKEGNKVKVLRAKQVVVKAGERRGNDV HVLSGIQAGDQIVLSGQVRLSNDTKVHVVENDALAVPAQTPML" misc_feature complement(28351..29310) /locus_tag="B565_0020" /note="RND family efflux transporter, MFP subunit; Region: RND_mfp; TIGR01730" /db_xref="CDD:162505" gene complement(29436..30032) /locus_tag="B565_0021" /db_xref="GeneID:10485938" CDS complement(29436..30032) /locus_tag="B565_0021" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_004390673.1" /db_xref="GI:330827721" /db_xref="GeneID:10485938" /translation="MILDKKESIFNAAHEVLGERGFHGLSIAEVAKKANVATGTIYRY FGDKDDLIRQLHQHTILQCVPMVMADVAIDKVSFQQFRQLWLNIHAIFVNEPNAIRCK LQYESSPLGAELETNPVILAAWEPLDRFFEQGVEQGLFIDLPIRALQVLSLDSVMHLA LQCRVHNITLTESQLETAIRASWNAILSPNLSTSGACS" misc_feature complement(29472..30023) /locus_tag="B565_0021" /note="Transcriptional regulator [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:31500" misc_feature complement(29868..30008) /locus_tag="B565_0021" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene 30265..30341 /locus_tag="B565_t001" /db_xref="GeneID:10485939" tRNA 30265..30341 /locus_tag="B565_t001" /product="tRNA-Arg" /db_xref="GeneID:10485939" gene 30393..30468 /locus_tag="B565_t002" /db_xref="GeneID:10489986" tRNA 30393..30468 /locus_tag="B565_t002" /product="tRNA-His" /db_xref="GeneID:10489986" gene 30489..30574 /locus_tag="B565_t003" /db_xref="GeneID:10489987" tRNA 30489..30574 /locus_tag="B565_t003" /product="tRNA-Leu" /db_xref="GeneID:10489987" gene 30651..30727 /locus_tag="B565_t004" /db_xref="GeneID:10489988" tRNA 30651..30727 /locus_tag="B565_t004" /product="tRNA-Pro" /db_xref="GeneID:10489988" gene 30907..31422 /locus_tag="B565_0022" /db_xref="GeneID:10489989" CDS 30907..31422 /locus_tag="B565_0022" /codon_start=1 /transl_table=11 /product="Ricin-type beta-trefoil lectin domain" /protein_id="YP_004390674.1" /db_xref="GI:330827722" /db_xref="GeneID:10489989" /translation="MNNKISFACSPTLLAALLLGGCTIKPPSTDVMMGSIASQPQEER SLSPLLTSGDFCVAVSQQKVLAQPCSGKDDQLFEWDLGELRLQDLCLQAKNDSEVMLA PCDGQAQWEWQKDRLFNSKVSRCLDVAGRRHTPGTPLRLAECYGGANQSFSWQRPNPW LETLKKQSLTW" misc_feature 31090..31368 /locus_tag="B565_0022" /note="Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly...; Region: RICIN; cd00161" /db_xref="CDD:29101" misc_feature order(31099..31101,31105..31107,31129..31131,31180..31182, 31204..31206,31210..31212,31285..31287,31324..31326, 31330..31332,31354..31356) /locus_tag="B565_0022" /note="putative sugar binding sites [chemical binding]; other site" /db_xref="CDD:29101" misc_feature order(31129..31137,31231..31236,31354..31362) /locus_tag="B565_0022" /note="Q-X-W motif; other site" /db_xref="CDD:29101" gene complement(31457..32272) /locus_tag="B565_0023" /db_xref="GeneID:10485940" CDS complement(31457..32272) /locus_tag="B565_0023" /codon_start=1 /transl_table=11 /product="Cof family hydrolase" /protein_id="YP_004390675.1" /db_xref="GI:330827723" /db_xref="GeneID:10485940" /translation="MFKVVVSDLDGTLLNKQHQISPRTRDTLHRLVEQGVKFVVATGR HHVDVRSFRDALGMDIYLITSNGAVVHDKQDQLIFNQPLPTEIAAELIALERDPSIHL NVYQGDDWVVEEELPWLLQFHDESGFTYRLVDDLKQEPKEQINKVFYIGDHEKLLKIE AHLNQRYGDQLNVTFSLPDCLEVMHAGVHKGNAVRAVLEQNGFDMSEAIAFGDGMNDF EMLTMVGRGIVMGNAHDRLKMALPEYEQTLTSDEDGVAVYLEKLFELESVSAA" misc_feature complement(31484..32272) /locus_tag="B565_0023" /note="putative hydrolase; Provisional; Region: PRK10976" /db_xref="CDD:182878" misc_feature complement(<32027..32263) /locus_tag="B565_0023" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature complement(order(32144..32149,32243..32251)) /locus_tag="B565_0023" /note="active site" /db_xref="CDD:119389" misc_feature complement(32234..32251) /locus_tag="B565_0023" /note="motif I; other site" /db_xref="CDD:119389" misc_feature complement(32147..32149) /locus_tag="B565_0023" /note="motif II; other site" /db_xref="CDD:119389" misc_feature complement(31559..>31714) /locus_tag="B565_0023" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" gene complement(32362..33402) /locus_tag="B565_0024" /db_xref="GeneID:10485941" CDS complement(32362..33402) /locus_tag="B565_0024" /codon_start=1 /transl_table=11 /product="Lysophospholipase L2" /protein_id="YP_004390676.1" /db_xref="GI:330827724" /db_xref="GeneID:10485941" /translation="MKPLSLSLLALTLFSAGALAVTNTYQLTSEADVPSLYQQTLPDF WRQHAVEGEFKGKDGVTIRYAALRQAKVDRAILIVNGRVESYLKYQELAWDLWRQGYS LYLIDHRGQGMSDRMLNDPQKGYVDQFDDYVVDLKQFHDQIIMADQPAKLFLLAHSMG GAISARYLERWPDDIKAAVLSSPMLGINLGGLPKWLAKGLASTIGTVGGWIGEPPYGP GQGAYQDHGFADNELTHSQSRYQAFRQLYEQHPQIKLGGATAHWIYQGITGADAAIAD AGAIKTPLLVLQAGSDSVVDNAAQERFCTIAKCEGGKPLRIEGAWHELFIESDDKRQP ALTAMVDFFARF" misc_feature complement(32365..33282) /locus_tag="B565_0024" /note="lysophospholipase L2; Provisional; Region: PRK10749" /db_xref="CDD:182697" misc_feature complement(32986..33228) /locus_tag="B565_0024" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" gene complement(33402..34061) /locus_tag="B565_0025" /db_xref="GeneID:10485942" CDS complement(33402..34061) /locus_tag="B565_0025" /codon_start=1 /transl_table=11 /product="transferase hexapeptide repeat containing protein" /protein_id="YP_004390677.1" /db_xref="GI:330827725" /db_xref="GeneID:10485942" /translation="MENPFGSWLESQIIRDHLTNPNIEAGDYSYYSGYYHGKPFEDHC VRYLLGDGSTRDTWESGLWGEVDRLIIGKFCSIGSGATFMLAGNQGHRLDWVSTFPFN PDTFGEGARSGFLRKGDTRIGNDVWIGSEAMIMPGITIGDGAVIATRAVVTKDVAPYT IVGGNPAQPIRRRFSDEQILMLQEMQWWDWPLPRLQASMALLCSGDIAALYHHWQQEC A" misc_feature complement(33489..33863) /locus_tag="B565_0025" /note="Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and...; Region: LbH_XAT; cd03349" /db_xref="CDD:100040" misc_feature complement(order(33543..33545,33567..33569,33615..33617, 33672..33674,33681..33683,33687..33689,33759..33761, 33765..33767,33771..33773,33786..33791,33834..33836)) /locus_tag="B565_0025" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:100040" misc_feature complement(order(33552..33554,33564..33566,33570..33575, 33579..33581,33603..33605,33618..33623,33672..33674, 33681..33683,33756..33758,33783..33785,33789..33791, 33798..33800)) /locus_tag="B565_0025" /note="active site" /db_xref="CDD:100040" misc_feature complement(order(33552..33554,33564..33566,33570..33575, 33579..33581,33603..33605,33618..33623,33657..33659, 33672..33674,33681..33683,33711..33713,33783..33785, 33789..33791)) /locus_tag="B565_0025" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:100040" gene complement(34061..34792) /locus_tag="B565_0026" /db_xref="GeneID:10485943" CDS complement(34061..34792) /locus_tag="B565_0026" /codon_start=1 /transl_table=11 /product="tRNA guanosine-2'-O-methyltransferase" /protein_id="YP_004390678.1" /db_xref="GI:330827726" /db_xref="GeneID:10485943" /translation="MTPERFKRITDMLAQRQLDLTVCMEEVHKPHNLAAIVRTADAIG IHRVHAVWPKTWIHKRKGTARGSQNWVDVKLHPDIGTAVAELKASGMQILATHLSDSS VDFRAIDYTKPTAILVGQEKHGIGEEALALADHHIVIPMVGMVQSLNVSVAAAAILYE AQRQRELAGCYQRGCPLTLEEQNSILFEGGYPIYAQLCKEKEMPYPQLGPAGEILADE EWWQRMQLTRKGWAQQSEQDDLQEE" misc_feature complement(34109..34792) /locus_tag="B565_0026" /note="tRNA guanosine-2'-O-methyltransferase; Provisional; Region: PRK11081" /db_xref="CDD:182949" misc_feature complement(34316..34738) /locus_tag="B565_0026" /note="SpoU rRNA Methylase family; Region: SpoU_methylase; cl00362" /db_xref="CDD:193788" misc_feature complement(34133..34306) /locus_tag="B565_0026" /note="C-terminal; Region: SpoU_methylas_C; pfam12105" /db_xref="CDD:152540" gene complement(34837..36954) /locus_tag="B565_0027" /db_xref="GeneID:10485944" CDS complement(34837..36954) /locus_tag="B565_0027" /codon_start=1 /transl_table=11 /product="Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase" /protein_id="YP_004390679.1" /db_xref="GI:330827727" /db_xref="GeneID:10485944" /translation="MYLFENLKEIASSYLPPEQVEKLKQAYVVARDAHQGQMRSSGEP YITHPVAVARILGDMRLDHETLMAAVLHDVIEDTSVTKADLAEQFGNAVAELVAGVSK LDKLKFRDRKEAQAENFRKMVMAMTQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR ETLEIFAPIANRLGIHTMKNELEELGFEALYPMRSRVLRESVRRARGNRREIIDSIQS EISGRLKEAGIEHQVSGREKNLFSIYNKMEKKELQFHEVMDIYAFRVKVKDIDTCYRV LGQMHSLYKPRPGRFKDYIAIPKTNGYQSLHTSLVGPHGVPVEVQIRTEFMDQMADKG VAAHWAYKQDGDSSGTTAQIRAQRWMQSLLELQQSAGSSFEFIEGVKTDLFPDEIYVF TPEGRIMELPAGATPVDFAYTVHTDIGHACVGSRVDRHPYPLSSPLHSGQTVEIITAP GARPNAAWLNFVVTTKARSKIRQFLKNLRTEESVVLGRRLLNHALGAKNIEDIPEPRI KQVLADTKHENLQGLLADVGLGNAMSVMVARRMLGDELPPEEQPKTSSKKMPIKGADG MLVTFANCCRPIPGDAIIAHISPGKGLVIHQEACRNIKGYSKEPDKYLPVQWEVDKEQ EQEFRTGISIEIVNHQGALAELANVIAATGANIHAISTEEKDGRVYQVSLLITTKSRI HLANIMRKIRVMPNVLKVSRQKN" misc_feature complement(34840..36954) /locus_tag="B565_0027" /note="bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; Provisional; Region: PRK11092" /db_xref="CDD:182957" misc_feature complement(36523..36822) /locus_tag="B565_0027" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" misc_feature complement(35962..36315) /locus_tag="B565_0027" /note="Nucleotidyltransferase (NT) domain of RelA- and SpoT-like ppGpp synthetases and hydrolases; Region: NT_Rel-Spo_like; cd05399" /db_xref="CDD:143389" misc_feature complement(order(35962..35964,35986..35988,35992..35994, 35998..36000,36034..36036,36046..36048,36052..36054, 36058..36060,36073..36075,36079..36081,36163..36165, 36175..36180,36241..36243,36247..36249)) /locus_tag="B565_0027" /note="synthetase active site [active]" /db_xref="CDD:143389" misc_feature complement(order(35962..35964,35992..35994,35998..36000, 36034..36036,36046..36048,36052..36054,36058..36060, 36073..36075,36079..36081,36247..36249)) /locus_tag="B565_0027" /note="NTP binding site [chemical binding]; other site" /db_xref="CDD:143389" misc_feature complement(order(35998..36000,36178..36180)) /locus_tag="B565_0027" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143389" misc_feature complement(35611..35790) /locus_tag="B565_0027" /note="TGS_RelA_SpoT: The RelA (SpoT) protein, also referred to as ppGpp hydrolase/synthetase, is a ribosome-associated protein that is activated during amino acid starvation and thought to mediate the stringent response. RelA contains a TGS domain, named...; Region: TGS_RelA_SpoT; cd01668" /db_xref="CDD:133438" misc_feature complement(34849..35061) /locus_tag="B565_0027" /note="ACT domain found C-terminal of the RelA/SpoT domains; Region: ACT_RelA-SpoT; cd04876" /db_xref="CDD:153148" gene complement(37086..37361) /locus_tag="B565_0028" /db_xref="GeneID:10485945" CDS complement(37086..37361) /locus_tag="B565_0028" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit omega" /protein_id="YP_004390680.1" /db_xref="GI:330827728" /db_xref="GeneID:10485945" /translation="MARVTVEDAVKQVGNRFDLVLVAARRARQIAVQGKDPLVDEEND KPTVIALREIELGLVNNQVMDTQDRYEQQEQEAAELAAVAAIAEGRG" misc_feature complement(37155..37361) /locus_tag="B565_0028" /note="RNA polymerase Rpb6; Region: RNA_pol_Rpb6; cl14651" /db_xref="CDD:189264" gene complement(37441..38067) /locus_tag="B565_0029" /db_xref="GeneID:10485946" CDS complement(37441..38067) /locus_tag="B565_0029" /codon_start=1 /transl_table=11 /product="Guanylate kinase family" /protein_id="YP_004390681.1" /db_xref="GI:330827729" /db_xref="GeneID:10485946" /translation="MAQQGTLYIISSPSGAGKSSLLNALLTQHNAAGKMQLSVSHTTR ATRPGEEHGVHYHFVQVEEFKALIERGDFLEWAEVFGNYYGTSRAAIEACLAKGIDVF LDIDWQGARQIRKQMPTKSIFILPPSREELERRLIGRGQDSAEVIAGRMAKAIAEMVH YDEYDYVIINEDFEQALFQLRSIIECQRLEMRHQQQAQKNLLQQLLAE" misc_feature complement(37525..38049) /locus_tag="B565_0029" /note="Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to guanosine monophosphate (GMP) to yield adenosine diphosphate (ADP) and...; Region: GMPK; cd00071" /db_xref="CDD:73180" misc_feature complement(order(37816..37818,37831..37833,37900..37902, 37927..37929,37936..37938,37957..37959,38014..38016, 38032..38034)) /locus_tag="B565_0029" /note="catalytic site [active]" /db_xref="CDD:73180" misc_feature complement(order(38014..38016,38032..38034)) /locus_tag="B565_0029" /note="G-X2-G-X-G-K; other site" /db_xref="CDD:73180" gene complement(38170..38295) /locus_tag="B565_0030" /db_xref="GeneID:10485947" CDS complement(38170..38295) /locus_tag="B565_0030" /codon_start=1 /transl_table=11 /product="Guanylate kinase" /protein_id="YP_004390682.1" /db_xref="GI:330827730" /db_xref="GeneID:10485947" /translation="MQADVGYAPAASYEYFDRLEYDSGRFFIRRILVKFAAFTSS" gene complement(38371..39435) /locus_tag="B565_0031" /db_xref="GeneID:10485948" CDS complement(38371..39435) /locus_tag="B565_0031" /codon_start=1 /transl_table=11 /product="ADP-heptose--LPS heptosyltransferase III" /protein_id="YP_004390683.1" /db_xref="GI:330827731" /db_xref="GeneID:10485948" /translation="MRHNMPLFQTPPSSICILRLSAIGDCCHALALVRIIQREWPQTR ITWITGKIEATLFADLPGVEVIPFDKSKGWRGYRDLWQTLKGRKFDALLHLQAAMRAS IATLGIKAKVKLGFDKERANDGQWLFTNHKVPSPASPHVLDGFLAFAKELGIKDLTPD WQLPISAEHQAWAREKIGGKPTLLICAAASKAFKNWTAAGYAALADHAASKGFQVYLC GGPAKLERDLAAEIRQLSQSKPVDLVGQTNLKQLLALIGEASLVLAPDTGPTHMATIV GTPVIGLYAHHNPARTGPYLCRDYVVSVYQELVEQETGKPLAELSWRTRLKDPEAMRK ITSEQVTAAFDRLCADRQLP" misc_feature complement(38398..39396) /locus_tag="B565_0031" /note="ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaF; COG0859" /db_xref="CDD:31200" misc_feature complement(38407..39396) /locus_tag="B565_0031" /note="Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from...; Region: GT1_LPS_heptosyltransferase; cd03789" /db_xref="CDD:99964" misc_feature complement(order(38620..38622,38629..38634,38641..38643, 38677..38682,38782..38784,38878..38883)) /locus_tag="B565_0031" /note="putative active site [active]" /db_xref="CDD:99964" gene 39646..40359 /locus_tag="B565_0032" /db_xref="GeneID:10485949" CDS 39646..40359 /locus_tag="B565_0032" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonic-acid transferase" /protein_id="YP_004390684.1" /db_xref="GI:330827732" /db_xref="GeneID:10485949" /translation="MRVQTKHNQICWYAEGAFRDPSPQLFDPAWWQNNRQVVGTSIGR GVTWFVKDESRHLVLRHYYRGGMVGKVVRDRFWFEGVESSRAMAEYTLLAKLCELGLP VPRPFGARMVKQGPFYRADILIERIRGAKDMVALLKQGPVATEVWHKIGQTVRQLHDA GVYHADLNSHNLLLDKEGKVWVIDFDKGAIRSPGEWQKANLERLLRSFNKESQLHTSF HFVPENWQTLMNGYQGKAI" misc_feature 39757..40200 /locus_tag="B565_0032" /note="Protein Kinases, catalytic domain; Region: PKc_like; cl09925" /db_xref="CDD:195926" misc_feature order(39769..39771,39784..39786,39820..39822,39826..39828, 39955..39957,40015..40026,40051..40053,40156..40158, 40162..40164,40192..40197) /locus_tag="B565_0032" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:88273" misc_feature <40078..40350 /locus_tag="B565_0032" /note="Protein Kinases, catalytic domain; Region: PKc_like; cl09925" /db_xref="CDD:195926" misc_feature order(40141..40143,40294..40296) /locus_tag="B565_0032" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:88612" gene 40430..41293 /locus_tag="B565_0033" /db_xref="GeneID:10485950" CDS 40430..41293 /locus_tag="B565_0033" /codon_start=1 /transl_table=11 /product="GGDEF domain-containing protein" /protein_id="YP_004390685.1" /db_xref="GI:330827733" /db_xref="GeneID:10485950" /translation="MEMLKTPLVDVTARLDPGLLSDAMALLEAGIWSWSAQHGLQRDP SCLRLLGLGECWPDDLGWLDRVHPDDVARLEDALLACQSGRSSGLRLEYRILHHHGHY IRLEERMRRDERGYLLGVVRHLDPAAVLVEERHGTDPLTGLESRGRFEQLLEERLATE SGTFSLLQFSVDHMAKIQQLFGEVACDAMLAKLARIVRHELRREDPFARWDEDGFILM LSQTERMSALEIAERLRLEIADASLLSQRPVTVSIGLVQSQAGEQLDHLLARLASCHS QARREHNTVVG" misc_feature 40556..40792 /locus_tag="B565_0033" /note="PAS fold; Region: PAS_3; pfam08447" /db_xref="CDD:117024" misc_feature 40838..41239 /locus_tag="B565_0033" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(40937..40939,41066..41068) /locus_tag="B565_0033" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(40952..40954,40961..40966,40976..40978,40988..40990, 41054..41056,41060..41071) /locus_tag="B565_0033" /note="active site" /db_xref="CDD:143635" misc_feature order(41042..41044,41126..41128) /locus_tag="B565_0033" /note="I-site; other site" /db_xref="CDD:143635" gene complement(41300..42154) /locus_tag="B565_0034" /db_xref="GeneID:10485951" CDS complement(41300..42154) /locus_tag="B565_0034" /codon_start=1 /transl_table=11 /product="drug/metabolite transporter superfamily permease" /protein_id="YP_004390686.1" /db_xref="GI:330827734" /db_xref="GeneID:10485951" /translation="MNYLIGVTLLWSFSFSLIGVYLAGQVDAYFSVLTRIALASLVFL PFLRRRWLRPDLAAKLMALGAIQLGIMYLFYYHSFLLLTVPEVLVFTIFTPIYVTLLH DLLERRFKPVYLWGALLAVLGAAVIRFDGLTESYVLGFMVVQGANLCFALGQVGYKVL LAREAEQPPQLAVFGCFYLGALMIALPAWWLLGKPQYPTSGLQWGILLWLGVGASGLG YFLWNKGATLVTSGVLAIMNNALIPAGLLVNLLLWGKDTDLTRLTIGGLLMLASLWVC QRDKSGQP" misc_feature complement(41336..42124) /locus_tag="B565_0034" /note="Carboxylate/Amino Acid/Amine Transporter; Region: 2A78; TIGR00950" /db_xref="CDD:162128" gene 42194..42655 /locus_tag="B565_0035" /db_xref="GeneID:10485952" CDS 42194..42655 /locus_tag="B565_0035" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390687.1" /db_xref="GI:330827735" /db_xref="GeneID:10485952" /translation="MMAEMEAAIQRLWARLPQVGAFSFTASNGEGSATDWSGRGEGRV QVTDHQGGWLYNEQGRYTTPHGKELAMHNRFWWQRSERGIRLSHLRYEAPVELFELLP QGDGRWLTAEPHLCGADHYSAELTEIDGGFLLSWQITGPRKNERLSYRYLI" gene complement(42780..42941) /locus_tag="B565_0036" /db_xref="GeneID:10485953" CDS complement(42780..42941) /locus_tag="B565_0036" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390688.1" /db_xref="GI:330827736" /db_xref="GeneID:10485953" /translation="MSGILTTLCGGLVLIAGWQYRQRLAGILGLLMVLLPWFFDSKLQ AMLSYALNA" gene complement(42926..43825) /locus_tag="B565_0037" /db_xref="GeneID:10485954" CDS complement(42926..43825) /locus_tag="B565_0037" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390689.1" /db_xref="GI:330827737" /db_xref="GeneID:10485954" /translation="MRSYLLLLAIGLLWGSQFIFMHQAVAELPPILVAAGRALCGSLT LGLLCLFMRLKSEHTPWRTYMLIALLDATIPFIMVAWGQQYVDSAIAAVVMGCIPFVT ILAAPLFISGERITKTGLLSVIIGFAGVLTLFWPKLSQGMNAGLLGAMAILLGASCFA IGLLMIKRFAKDHPVVVARNILISSAIQLLLVAPFMVDLSSLTLPSTQALSAITVLGT LCTGLVYFLYMALIQKAGPTFASFSNYLVPLFGVMLGALFLGEQIHPTTGVALALILG SVAMNQWAQQRRMQREVSLCQAS" misc_feature complement(42962..43786) /locus_tag="B565_0037" /note="putative DMT superfamily transporter inner membrane protein; Provisional; Region: PRK11272" /db_xref="CDD:183067" misc_feature complement(43421..43786) /locus_tag="B565_0037" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" misc_feature complement(42986..43354) /locus_tag="B565_0037" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene 43917..44876 /locus_tag="B565_0038" /db_xref="GeneID:10485955" CDS 43917..44876 /locus_tag="B565_0038" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004390690.1" /db_xref="GI:330827738" /db_xref="GeneID:10485955" /translation="MDSSLARLDLNLLAVFDMLMQERNVTRAAERLHLSQSTVSHALG RLRVALDDPLFVMSRREMMPTERAKALAGPVRQALAMLEQGLRQAKGFDPATARRIFR IATPGSVEHGLVPVLVDRLHQQAPHCRLEVCELADSDYERELEKGELDLVIGFAGANH LSPRLWREEWFNNPLVCLSPLGSELPDVLTPVELVSRPHIHTSSWGHSQAMVELWLAR FGVERELGVRLPSFMAVPPLMATGRYLVVVPEMIGRHFCRYYPLRMHQLDPAIPIVYL MAGHPLTAHDEAIGWFKSMLHQLVFDLYGDDALGTPAQRMLAK" misc_feature 43938..44825 /locus_tag="B565_0038" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature 43944..44123 /locus_tag="B565_0038" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 44217..44813 /locus_tag="B565_0038" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold; Region: PBP2_Nitroaromatics_like; cd08417" /db_xref="CDD:176109" misc_feature order(44232..44234,44238..44243,44253..44255,44433..44435, 44541..44543,44739..44741) /locus_tag="B565_0038" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176109" misc_feature order(44235..44237,44244..44249,44256..44261,44268..44273, 44277..44282,44289..44294,44298..44312,44316..44318, 44508..44510,44592..44606,44613..44618,44625..44630, 44637..44639) /locus_tag="B565_0038" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176109" gene complement(44855..45868) /locus_tag="B565_0039" /db_xref="GeneID:10485956" CDS complement(44855..45868) /locus_tag="B565_0039" /codon_start=1 /transl_table=11 /product="tryptophanyl-tRNA synthetase II" /protein_id="YP_004390691.1" /db_xref="GI:330827739" /db_xref="GeneID:10485956" /translation="MHNPVILTGDRPTGKLHIGHYVGSLRQRVEAQHHYRQFVMIADL QALTDNGHNPAKVTDNVLEVMADYLAVGLDPAKTTFCLQSALPALAELTCYYLNLVSV ARLERNPTVKAEIQQKGFERTLPAGFLVYPVSQAADITAFRASHVPVGEDQLPMLEQT NEIVRRFNSLVGKEVLTECQPILSDTGRLPGIDGKAKMSKSLGNTIELGMPTEEVKQA VFAMYTDPNHLKVSDPGQVEGNTVFAYLDAFHPDKALVADMKAHYRRGGLGDMRCKQV LNDCLQTLLAPMRERRTAAIADKKMLLELLYQGTEQARIITDEVLAEVKSAMGLDYFA SIR" misc_feature complement(44870..45859) /locus_tag="B565_0039" /note="tryptophanyl-tRNA synthetase II; Reviewed; Region: PRK12282" /db_xref="CDD:183400" misc_feature complement(45017..45853) /locus_tag="B565_0039" /note="catalytic core domain of tryptophanyl-tRNA synthetase; Region: TrpRS_core; cd00806" /db_xref="CDD:173903" misc_feature complement(order(45269..45271,45275..45280,45305..45307, 45401..45403,45410..45415,45419..45424,45428..45430, 45455..45457,45464..45466,45476..45478,45620..45622, 45734..45736,45749..45751,45800..45802,45809..45814, 45818..45820,45836..45850)) /locus_tag="B565_0039" /note="active site" /db_xref="CDD:173903" misc_feature complement(45809..45820) /locus_tag="B565_0039" /note="HIGH motif; other site" /db_xref="CDD:173903" misc_feature complement(order(45467..45472,45479..45484,45488..45490, 45551..45556,45560..45571,45575..45580,45587..45595, 45599..45604,45725..45730,45737..45739)) /locus_tag="B565_0039" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173903" misc_feature complement(45266..45280) /locus_tag="B565_0039" /note="KMSKS motif; other site" /db_xref="CDD:173903" gene complement(46061..46498) /locus_tag="B565_0040" /db_xref="GeneID:10485957" CDS complement(46061..46498) /locus_tag="B565_0040" /codon_start=1 /transl_table=11 /product="Universal stress protein A" /protein_id="YP_004390692.1" /db_xref="GI:330827740" /db_xref="GeneID:10485957" /translation="MSGTTYYKHILAAIDLSEDNRKVIDKAVDRARSNGAKLSVIHVD VDLKDLYTEMIDIDIDNVQDQVIAEAKEKLEAFLASVDYPIEKKLVICGDLSERVNQA VKEYEIDLLVCGHRQSFWSLLTSSARQLMNTVPCDLLVVPLQK" misc_feature complement(46076..46474) /locus_tag="B565_0040" /note="Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to...; Region: USP_Like; cd00293" /db_xref="CDD:30165" misc_feature complement(order(46118..46129,46151..46156,46157..46162, 46370..46372,46454..46462)) /locus_tag="B565_0040" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30165" gene 46900..48087 /locus_tag="B565_0041" /db_xref="GeneID:10485958" CDS 46900..48087 /locus_tag="B565_0041" /codon_start=1 /transl_table=11 /product="Short-chain alcohol dehydrogenase family protein" /protein_id="YP_004390693.1" /db_xref="GI:330827741" /db_xref="GeneID:10485958" /translation="MIIHPQIQGCVARNCHPIGCRAAVQQQIERIKAAGPFNGPKRVL VLGASSGFGLASRIALAFGAGADTIGISFERGPSDKGLGSAGWYNNIWFRKEAEQEGR IAINLIGDAFSDGMRQQAIDTIRQQLGQVDLVIYSLASGIRVLPDGTQVRSVLKTTGQ PFSGWGLDLERDILVQQSLAPATPEEIRDTVTVMGGEDWQLWMQALQQAGCLAPGAQT VAYSYIGPESTYPLYRDGTIGYAKEHLHATAETINLQLAEIGGHAWVSVCKALVTKAS AYIPVLPVYLGLLMGVMKERGVHEGCIEQMQRLFAAKMYGPNGVVADGNRLIRMDDYE LDPAIQAAVSALWPKVTPDNFHALGDFAGLRQDFMQLNGFELPGVDYAAPVDVASLGE LTP" misc_feature 46900..48084 /locus_tag="B565_0041" /note="trans-2-enoyl-CoA reductase; Provisional; Region: PRK13656" /db_xref="CDD:184213" misc_feature 46903..47136 /locus_tag="B565_0041" /note="NAD(P)H binding domain of trans-2-enoyl-CoA reductase; Region: Eno-Rase_NADH_b; pfam12242" /db_xref="CDD:152677" misc_feature 47137..47844 /locus_tag="B565_0041" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 47866..48051 /locus_tag="B565_0041" /note="Enoyl reductase FAD binding domain; Region: Eno-Rase_FAD_bd; pfam07055" /db_xref="CDD:148584" gene 48180..48704 /locus_tag="B565_0042" /db_xref="GeneID:10485959" CDS 48180..48704 /locus_tag="B565_0042" /codon_start=1 /transl_table=11 /product="ferritin-like protein 2" /protein_id="YP_004390694.1" /db_xref="GI:330827742" /db_xref="GeneID:10485959" /translation="MLAQAMIEKLNEQINLEFYSSNLYLQMSAWCEDKGFEGAATFLR QHAVEERQHMERLFTYVSETGAMPKLGAIDAPPHEFKSLGDVFRTTLEHEYHITKCIN GLAHVAFTTQDYSTFNFLQWYVAEQHEEEKLFKSIVDRLGLVGEDGKGLYFIDKELAE LAKGAPASIMDSNA" misc_feature 48189..48653 /locus_tag="B565_0042" /note="nonheme-containing ferritins; Region: Nonheme_Ferritin; cd01055" /db_xref="CDD:153113" misc_feature 48198..48611 /locus_tag="B565_0042" /note="Ferritin-like domain; Region: Ferritin; pfam00210" /db_xref="CDD:189451" misc_feature order(48228..48230,48324..48329,48336..48338,48459..48461, 48555..48557,48564..48569) /locus_tag="B565_0042" /note="ferroxidase diiron center [ion binding]; other site" /db_xref="CDD:153113" gene 48854..50038 /locus_tag="B565_0043" /db_xref="GeneID:10485960" CDS 48854..50038 /locus_tag="B565_0043" /codon_start=1 /transl_table=11 /product="pyridine nucleotide-disulfide oxidoreductase family protein" /protein_id="YP_004390695.1" /db_xref="GI:330827743" /db_xref="GeneID:10485960" /translation="MKQVDVVVIGAGAAGLMCAAQAGYRGRSVLVLDNAKKPGRKILI SGGGRCNFTNHQAGAHAYLSENPHFSKSALARYTQQDFIDLVDRHGVNYHERTLGQLF CLESAKDIVDVLLTECDWAGVTLQFQTEILTVSKQDEGFVLTTSKGEIGCHSLVVATG GLSMPKLGATPYGFKLAEQFGLKVLPTRAGLVPFTLHQAEKEAFADLAGISLPVAVTA EDGTRFKEAMLFTHRGLSGPVILQISSYWHAGEKIHINLLPELDIPAALREWAQAHPA QELKTVLGRELPKRFVDKLVELGQLVSKPMRQYNERELEAVANLLGDWQILPNGTEGY RTAEVTLGGVDTNELSSKTMEARKVPGLYFIGEVVDVTGWLGGYNFQWAWSSGWVAGQ YC" misc_feature 48926..50032 /locus_tag="B565_0043" /note="Predicted flavoproteins [General function prediction only]; Region: COG2081" /db_xref="CDD:32264" misc_feature 48926..50032 /locus_tag="B565_0043" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" gene 50120..51793 /locus_tag="B565_0044" /db_xref="GeneID:10485961" CDS 50120..51793 /locus_tag="B565_0044" /codon_start=1 /transl_table=11 /product="signal transduction histidine kinase, LytS" /protein_id="YP_004390696.1" /db_xref="GI:330827744" /db_xref="GeneID:10485961" /translation="MLENQMMLLAVFERAALMLMTLFFLTRTRPFQRLFQKRDHTPAE LVLVASIFGLFAVFSTYTGIPVEGALINVRIIAIISGGILFGPWVGIPAGVISGLHRY LIDMDGHTSIPCLIASIIAGLLATWLHLRCRKSRLWLYGILAGMLCEGLTMLLIWLLT EPHEVGVEIVNHIAYPMIAGALCIGLIIKLVQDLDDEKELIAAKQAKLALDIANKTLP FFQNIDRHSLSQVCDVIRRDISADAVAITDTHDVLAYVGVGKDYYELDEHHAISGMTQ QAVLLDQIIINNDLRQYHLSDFHSVIIIPLRENGSVSGTLKIYYRRTHSITSSLREMA VGLSQLISTQMEVSRIEQLKEMTRKAEFTALQSKINPHFLFNALNAISSLIRIRPQQA RQLIANLADYLRYNLNKGDTLIDIKEELQQVRDYVAIEQARFGDKLEVVFDVDDVHIE VPSLLLQPLVENAILHGIQPRSAPGRVTIEVKQLAGGIRVAVRDTGYGISQEVIDGVA AGRVGSRSIGLMNVHQRVKLLYGDGLHLKRLEPGTEVSFYLPDQESMPC" misc_feature 50225..51778 /locus_tag="B565_0044" /note="Putative regulator of cell autolysis [Signal transduction mechanisms]; Region: LytS; COG3275" /db_xref="CDD:33086" misc_feature 50240..50506 /locus_tag="B565_0044" /note="Protein of unknown function (DUF1393); Region: DUF1393; cl01942" /db_xref="CDD:194214" misc_feature 51200..51445 /locus_tag="B565_0044" /note="Histidine kinase; Region: His_kinase; pfam06580" /db_xref="CDD:191560" misc_feature 51482..51766 /locus_tag="B565_0044" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(51491..51493,51503..51505,51512..51514,51593..51595, 51599..51601,51605..51607,51611..51616,51665..51676, 51722..51724,51728..51730,51743..51748,51752..51754) /locus_tag="B565_0044" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 51503..51505 /locus_tag="B565_0044" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(51605..51607,51611..51613,51665..51667,51671..51673) /locus_tag="B565_0044" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene 51840..52583 /locus_tag="B565_0045" /db_xref="GeneID:10485962" CDS 51840..52583 /locus_tag="B565_0045" /codon_start=1 /transl_table=11 /product="LytTR family two component transcriptional regulator" /protein_id="YP_004390697.1" /db_xref="GI:330827745" /db_xref="GeneID:10485962" /translation="MLKAIIVEDEYLAREELIYLVNQHSTIEIVASFEDGLEAFKYLQ DHEVDVVFLDIQIPSIDGLLLAKNLHKSSHPPHIVFVTAYKEFAVEAFELEAFDYILK PYNEPRIINLLQKLEHAGKSQPATTGEASGEGSSPHNRTVNLVKGERIIVTPCEQIYY AEADEKLTYVYTRDDRYVMTMTISEFVSRLPAEGFFRCHRSYCVNINKIREIVPWFNS TYLIRLHDLPFEVPVSRSNIKAFRQLMRL" misc_feature 51840..52580 /locus_tag="B565_0045" /note="Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]; Region: LytT; COG3279" /db_xref="CDD:33090" misc_feature 51852..52187 /locus_tag="B565_0045" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(51861..51866,51999..52001,52023..52025,52083..52085, 52134..52136,52143..52148) /locus_tag="B565_0045" /note="active site" /db_xref="CDD:29071" misc_feature 51999..52001 /locus_tag="B565_0045" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(52008..52013,52017..52025) /locus_tag="B565_0045" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 52143..52151 /locus_tag="B565_0045" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 52281..52574 /locus_tag="B565_0045" /note="LytTr DNA-binding domain; Region: LytTR; cl04498" /db_xref="CDD:156100" gene 52693..53883 /locus_tag="B565_0046" /db_xref="GeneID:10485963" CDS 52693..53883 /locus_tag="B565_0046" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="YP_004390698.1" /db_xref="GI:330827746" /db_xref="GeneID:10485963" /translation="MTIDLNRTRYLTLIGTIITQFALGSVYTWSLFNAQLSDKLDEPV SQVAFAFGLLSLSLAVASSMAGKLQERFGVRNVTLGAGVLLGIGFFLTAHASNLAMLY LCAGILVGFADGTGYLMTLSNCVKWFPERKGLISACSIGAYGLGSLGFKYINLLLLSS SGLETTFQLWGLIAMSMVLVGGMLMKDAPKQAASVQQSESRDFTLAEAMRKPQYWMLA LMFLTACMSGLYVIGVAKDIGEKMVGLPAVVAANAVAIIAMANLGGRLVLGILSDKMS RIRVITIAQLITLAGMALLLFVPLNANLFFVAVACVAFSFGGTITVYPSLVSDFFGLN NLTKNYGVIYLGFGLGSIIGSIVASLFGGFMATFHLILVLLVVALVLSLTIRLPAPVA VERA" misc_feature 52714..53793 /locus_tag="B565_0046" /note="Oxalate/Formate Antiporter; Region: 2A0111; TIGR00890" /db_xref="CDD:162091" misc_feature 52885..53718 /locus_tag="B565_0046" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature order(52885..52890,53029..53034,53041..53046,53053..53058, 53065..53067,53098..53103,53110..53115,53131..53133, 53359..53361,53368..53373,53380..53385,53392..53394, 53440..53442,53452..53454,53464..53466,53473..53475, 53485..53487,53629..53631,53638..53643,53650..53652, 53662..53667,53674..53676,53707..53712) /locus_tag="B565_0046" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene complement(53957..55081) /locus_tag="B565_0047" /db_xref="GeneID:10485964" CDS complement(53957..55081) /locus_tag="B565_0047" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole carboxylase, ATPase subunit" /protein_id="YP_004390699.1" /db_xref="GI:330827747" /db_xref="GeneID:10485964" /translation="MILPPATLGMLGGGQLGRYFVMAAHRLGYKVVVLDPDPASIAGA AADHHIVAPYDDPTALHELASRCEAISYEFENVPAATLALLENQKPVRPAASAVRICQ DRREEKAFLRGANIRVAPYLALLPEEPIPTQASELLPAILKTAREGYDGKGQWQVNNL DELATALAASGVPCVLEQRLALEGEFALTLARSPSGAISALPLVQNWHSGGILDQTRS PANVPALESEAKGIAEHIIAALDYVGVLTVEFFLVEGRLLVNELAPRPHNSGHPSLDN AACNQFELQVRALCDLPLPEQIAVRPALLINLLGDLWQNGTPDWAALLALPGLHLHLY GKSEPRPGRKMGHITVTGDDWSTVEESCRQARQLLGLAPR" misc_feature complement(53981..55072) /locus_tag="B565_0047" /note="phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed; Region: PRK06019" /db_xref="CDD:180352" misc_feature complement(54251..54751) /locus_tag="B565_0047" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" gene complement(55078..55587) /locus_tag="B565_0048" /db_xref="GeneID:10485965" CDS complement(55078..55587) /locus_tag="B565_0048" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole carboxylase, catalytic subunit" /protein_id="YP_004390700.1" /db_xref="GI:330827748" /db_xref="GeneID:10485965" /translation="MNTPPLIGLVMGSDSDWPVLQAAARILKEHGVPYEAQVVSAHRT PDLLFEYAATARERGLRAIIAGAGGAAHLPGMVAAKTTLPVLGVPIPSRHLKGMDSLL SIVQMPKGVPVATFAIGEAGAANAALFAVSLLSVARDDDAPRYRQQINDFRTHERDRV LALQLEEPT" misc_feature complement(<55252..55575) /locus_tag="B565_0048" /note="AIR carboxylase; Region: AIRC; cl00310" /db_xref="CDD:153673" gene complement(55651..55953) /locus_tag="B565_0049" /db_xref="GeneID:10485966" CDS complement(55651..55953) /locus_tag="B565_0049" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390701.1" /db_xref="GI:330827749" /db_xref="GeneID:10485966" /translation="MQTETRTLLTVITEANLEPTLLRTLTREGLRGYTITDARGRGDH GERNASWSESGNIRLEAICSREQAERLLAHLQSRYYPDYAMIAFLQPVEIVRPEKF" gene complement(55958..56884) /locus_tag="B565_0050" /db_xref="GeneID:10485967" CDS complement(55958..56884) /locus_tag="B565_0050" /codon_start=1 /transl_table=11 /product="sodium bicarbonate cotransporter" /protein_id="YP_004390702.1" /db_xref="GI:330827750" /db_xref="GeneID:10485967" /translation="MLDVVVLFFLFGLLAGLVRSELKMPPALYDTLSLFLLLAIGLKG GVGLAQQSLQPLLPQLALVILLGVVQTLLGFAVLRLKMNRVDAAATAAHYGSVSVATF AVGVNWLTERGISFESQLSIFLAVMEIPAILVGIVLARGISRETRWRMLAHETFLGKG VTLLLGGMAIGYLAGPDGIAPLKPLFVDLFKGALALFLLEMGLIVARQCQDLRRHGLF LLGFALLMPLASAGLGLAAGQLMGLSLGGLTLLATLAASASYIAVPATMRIAVPQANP GLSLSAVLGVTFPFNIMLGIPLYHSWARHFTE" misc_feature complement(55973..56830) /locus_tag="B565_0050" /note="Domain of unknown function (DUF897); Region: DUF897; cl01312" /db_xref="CDD:120556" gene 56994..57896 /locus_tag="B565_0051" /db_xref="GeneID:10485968" CDS 56994..57896 /locus_tag="B565_0051" /codon_start=1 /transl_table=11 /product="Regulatory protein" /protein_id="YP_004390703.1" /db_xref="GI:330827751" /db_xref="GeneID:10485968" /translation="MLNYKQLYYFWHVARSGSVTQAAEQLHLTPQTISGQVAELEQSL GVALFNRVGRRLVLTAAGRQAQEQAGAIFSLGAELEHTLRHASQELTMQVGIADSVPR TLAFELLAPAMALATPLRLVCHEERAEQLFSELARHKLDMVLIDRPLPPDSGVRGYNH ELGRSPLALFASPELAARARDGFPASLEGLPLLIPGEKSATHDRLLEWYRQQGIHPHL VGQFDDSTLMKSFGKAGMGIFPAPLAMADEIGRLYGVERIATLTDVTLSYYLVSAGRH LSHPGVQAVMEGAQQRLAVLAGNK" misc_feature 56997..57854 /locus_tag="B565_0051" /note="transcriptional activator NhaR; Provisional; Region: nhaR; PRK11062" /db_xref="CDD:182938" misc_feature 57006..57170 /locus_tag="B565_0051" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 57270..57872 /locus_tag="B565_0051" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature order(57309..57314,57318..57323,57330..57332,57342..57344, 57348..57368,57648..57665,57681..57686,57690..57695) /locus_tag="B565_0051" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene 58162..60027 /locus_tag="B565_0052" /db_xref="GeneID:10485969" CDS 58162..60027 /locus_tag="B565_0052" /codon_start=1 /transl_table=11 /product="Vitamin B12 transporter BtuB" /protein_id="YP_004390704.1" /db_xref="GI:330827752" /db_xref="GeneID:10485969" /translation="MSKKFLAAALLPTAAFAQQLTIPVNPTMVVTATRVAQPASSVLA PVNVVTRDEIDRLQAQTVTDVVKTLPGVEVVSNGGRGQLSSLRVRGGTSSQTLVLVDG VRSASLTAGMTELNNLPLNQVERIEYIRGPRATIYGSDAIGGVINIITRPDKGTNQHK FNIGAGSHQQRQAAFSSASQVGEAGQLKVAGGFDDEEGYNVHPLPGINDGDRHGHQGY NAMLDYQQALGSNWDLFGTTRWFRNVAQYDRSSAASAWGPATHQRNETWTENQSYQLG SRYHDDRYLSELRGAFSKQDAYDYQDNSGRDQANTRTYTRQYSLNWVNSLKLNESWTL GGGADWQSDRLDDRSRSSGSTYPVDAKERDNTGLYALAQFDNQIWQGELSGRSDDNEQ YGRHNTWQTGAGWRFAEDYRLSARYGTGFRAPTFNDLYYPGSGNLNLKPEESKSSELM LDGQTAGVEWRMTGYRNDFEQMIQWAPNGNGGSSPQNVGKARIEGVELEGEFDTGWLS HRVSAEYKDPKDKVTDKQLQLISRKGAKWITQAQWQQFDGSLSWIYQGERYGNVANTT ELGGYSLWNLAVGYKVTPALKVSGKINNLLDKEYQTAVGYPADERAYYVTMDYSL" misc_feature 58240..60021 /locus_tag="B565_0052" /note="vitamin B12/cobalamin outer membrane transporter; Provisional; Region: btuB; PRK10641" /db_xref="CDD:182610" misc_feature 58294..60021 /locus_tag="B565_0052" /note="TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel; Region: ligand_gated_channel; cd01347" /db_xref="CDD:73259" misc_feature order(58294..58323,58351..58380,58417..58434,58453..58476, 58519..58551,58585..58611) /locus_tag="B565_0052" /note="N-terminal plug; other site" /db_xref="CDD:73259" misc_feature order(59011..59013,59098..59100) /locus_tag="B565_0052" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:73259" gene 60136..60939 /locus_tag="B565_0053" /db_xref="GeneID:10485970" CDS 60136..60939 /locus_tag="B565_0053" /codon_start=1 /transl_table=11 /product="glutamate racemase" /protein_id="YP_004390705.1" /db_xref="GI:330827753" /db_xref="GeneID:10485970" /translation="MANILVFDSGMGGLTIYREIRRVLPAHNYFYCFDNANFPYGELS EPALIAACTRLVTTMVARHQIDLVVIACNTASTIALPALREALDIPVVGVVPAIKPAA AQTRNGCIGLLATPGTVSRDYTHELIAQFAPSKRVLLKGTTELVIEAEHKLSGLPVNM ALLREVLADWLEGEEKPDTLVLGCTHFPLLNEEIGQLMPQCMLIDSGSAVAKRVAWLL NNGGHAAVQSVHIEEVIARAYCTRLDGEAQKLTAPLQAWGLSSLEEVKY" misc_feature 60139..60933 /locus_tag="B565_0053" /note="Asp/Glu/Hydantoin racemase; Region: Asp_Glu_race; cl00518" /db_xref="CDD:193849" gene complement(60947..61411) /locus_tag="B565_0054" /db_xref="GeneID:10485971" CDS complement(60947..61411) /locus_tag="B565_0054" /codon_start=1 /transl_table=11 /product="RNA-binding protein" /protein_id="YP_004390706.1" /db_xref="GI:330827754" /db_xref="GeneID:10485971" /translation="MQAAILALVLAVVGYLVAQALQFSLKAEVIFAAGLAIGGFVVPL FLKRTPANVAESIANQETCTLYVGNLPYRANEIAVRELFAEQGQVISVRLMKDKATGK RRGFGFVEMPAADAAKAIAALNDKEYQQRTLKVREANDKRDKEEREGSETDA" misc_feature complement(61004..61222) /locus_tag="B565_0054" /note="RRM (RNA recognition motif), also known as RBD (RNA binding domain) or RNP (ribonucleoprotein domain), is a highly abundant domain in eukaryotes found in proteins involved in post-transcriptional gene expression processes including mRNA and rRNA...; Region: RRM; cd00590" /db_xref="CDD:100104" misc_feature complement(order(61088..61090,61094..61096,61214..61216)) /locus_tag="B565_0054" /note="RNA/DNA binding site [nucleotide binding]; other site" /db_xref="CDD:100104" misc_feature complement(61004..61009) /locus_tag="B565_0054" /note="RRM dimerization site [polypeptide binding]; other site" /db_xref="CDD:100104" gene 62055..63604 /locus_tag="B565_r001" /db_xref="GeneID:10485972" rRNA 62055..63604 /locus_tag="B565_r001" /product="16S ribosomal RNA" /db_xref="GeneID:10485972" gene 63798..63873 /locus_tag="B565_t005" /db_xref="GeneID:10489955" tRNA 63798..63873 /locus_tag="B565_t005" /product="tRNA-Glu" /db_xref="GeneID:10489955" gene 64287..67002 /locus_tag="B565_r002" /db_xref="GeneID:10489990" rRNA 64287..67002 /locus_tag="B565_r002" /product="23S ribosomal RNA" /db_xref="GeneID:10489990" gene 67080..67199 /locus_tag="B565_r003" /db_xref="GeneID:10489956" rRNA 67080..67199 /locus_tag="B565_r003" /product="5S ribosomal RNA" /db_xref="GeneID:10489956" gene 67365..68228 /locus_tag="B565_0055" /db_xref="GeneID:10489957" CDS 67365..68228 /locus_tag="B565_0055" /codon_start=1 /transl_table=11 /product="HesA/MoeB/ThiF family protein" /protein_id="YP_004390707.1" /db_xref="GI:330827755" /db_xref="GeneID:10489957" /translation="MAALKQGGGMKAEYLQRFGGIARLYGQNALRSFSQAKVCVVGIG GVGSWAAEALARAGISQITLIDMDDICITNTNRQIHAMQGTVGRLKTEVMAERIRAIN PDCEVIEVDDFVTADNLAEHIKREFDYVVDAIDSVKAKVALIAFCKRNKIPVIVAGGA GGQMDPTQITVADLAKTIQDPLAAKVRSDLRRLHNFSKNPARKFGVECVFSTEQLSYP DGNGGTCQAKAASDGTMKMDCASGFGAVTPVTATFGLVAASRVLKKIAERGARAEKES GNEEAGSIGEA" misc_feature 67404..68180 /locus_tag="B565_0055" /note="sulfur acceptor protein CsdL; Provisional; Region: PRK15116" /db_xref="CDD:185071" misc_feature 67437..68150 /locus_tag="B565_0055" /note="Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-...; Region: YgdL_like; cd00755" /db_xref="CDD:30110" misc_feature order(67488..67490,67494..67496,67500..67502,67560..67562, 67566..67568,67593..67595,67632..67634,67761..67763, 67779..67781) /locus_tag="B565_0055" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:30110" misc_feature order(67500..67502,67782..67784,67836..67841,67857..67859) /locus_tag="B565_0055" /note="putative substrate interface [chemical binding]; other site" /db_xref="CDD:30110" gene complement(68250..68684) /locus_tag="B565_0056" /db_xref="GeneID:10485973" CDS complement(68250..68684) /locus_tag="B565_0056" /codon_start=1 /transl_table=11 /product="SufE protein" /protein_id="YP_004390708.1" /db_xref="GI:330827756" /db_xref="GeneID:10485973" /translation="MNSLATYTRIGVEPDTNSIRQQFAAVNGWENQYRLIIQLGKQLP ALPSEWQQEAFRLKGCESQAWLKGEQSEDGCWHFACDSDARIVRGLIVIVLAALNHQS SAAIQAFDMEGYLTELGLEKHLSPSRGNGLRAIVLAIREQAV" misc_feature complement(68253..68633) /locus_tag="B565_0056" /note="Fe-S metabolism associated domain; Region: SufE; cl00951" /db_xref="CDD:193985" gene complement(68698..69918) /locus_tag="B565_0057" /db_xref="GeneID:10485974" CDS complement(68698..69918) /locus_tag="B565_0057" /codon_start=1 /transl_table=11 /product="Cysteine desulfurase" /protein_id="YP_004390709.1" /db_xref="GI:330827757" /db_xref="GeneID:10485974" /translation="MNQQQHDQLRSQFPALAQEVNGHPLVYLDNAATTQKPRAVLDAI AHYYGADNANVHRAAHALSGRATRAFEAARETVARFINAPHSHEVIWTRGTTEAINLV AQSWGMSELKAGDEIILSTLEHHANIVAWQLVAQRTGAVIRVIPLNERGDLDLAAYHA MLGPRTRLVSVAHVSNALGTVNPVTWIVEAAKAVGAVTLIDGAQAVAHLEVDVQAIGC DFYAFSGHKLYGPTGIGVLWGCTELLERMPPWQAGGEMIDRVSFSGTTFNTLPFKFEA GTPHIAGAIGLAAAIDFVMGQDRQWLANHEQALTDYLVAGLQQVPGLRLIGEPDQRAG AVSFLLEDIHPQDAATLLDMQGIALRVGHHCAMPLMESLGIGGTIRASLACYNNRDDV DALLAALHKLSDFF" misc_feature complement(68713..69900) /locus_tag="B565_0057" /note="Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]; Region: csdA; COG0520" /db_xref="CDD:30866" misc_feature complement(68722..69843) /locus_tag="B565_0057" /note="Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS...; Region: SufS_like; cd06453" /db_xref="CDD:99746" misc_feature complement(order(69238..69243,69247..69249,69307..69312, 69316..69318,69547..69549,69622..69624,69631..69636)) /locus_tag="B565_0057" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99746" misc_feature complement(69238..69240) /locus_tag="B565_0057" /note="catalytic residue [active]" /db_xref="CDD:99746" gene 70100..72112 /locus_tag="B565_0058" /db_xref="GeneID:10485975" CDS 70100..72112 /locus_tag="B565_0058" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase Rep" /protein_id="YP_004390710.1" /db_xref="GI:330827758" /db_xref="GeneID:10485975" /translation="MKLNPNQNEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCG YSARNIAAVTFTNKAAREMKERVGQTLGRKEARGLMVSTFHTLGLDIIRREHKSLNLK ANFSLFDDTDQLALLKELTEDELDNDKDKLSALISQISNWKNDLILPARAMRIARGPE EVLMAQLYERYHRQMVAYNALDFDDLIVMPTLLLKSNQEVRERWQNKIRYLLVDEYQD TNTSQYELVKQIVGERARFTVVGDDDQSIYSWRGAKPQNLVLLSEDFPSLKLIKLEQN YRSKRRILKCANILIANNPHVYDKALFSELDEGVKLKVLFAKNEEHEAERIAAEMMGH KFMNRTRFKDYAILYRGNHQSRIFEKALMTNRIPYRISGGTSFFSRTEIKDIMAYLKL LVNPDEDTAFLRVVNLPRREIGPTTLEKLGQYANQRGKSLFAASFELGLEQHLSGRGL VALQAFTNWLVRLGDQALRGNPVEAVRDMIKEIHYEEWLYETSPSPKAAEMRMQNVST LYRWITEMLEGDELEESMTLAQVVTRLTLRDMMERNEGEDDADQVQLMTLHASKGLEF PYVYMVGMEEGLLPHQTSIDEDNVEEERRLAYVGITRAQTELTFTLCKERRQFGESVR PEPSRFLLELPQDDLEWENQKKVTAEERQQKGQVGVANLRALFKKG" misc_feature 70100..72109 /locus_tag="B565_0058" /note="ATP-dependent DNA helicase Rep; Provisional; Region: PRK10919" /db_xref="CDD:182838" misc_feature 70106..71554 /locus_tag="B565_0058" /note="UvrD/REP helicase; Region: UvrD-helicase; cl14126" /db_xref="CDD:196784" gene complement(72115..74391) /locus_tag="B565_0059" /db_xref="GeneID:10485976" CDS complement(72115..74391) /locus_tag="B565_0059" /codon_start=1 /transl_table=11 /product="Gaf domain/GGDEF domain/eal domain-containing protein" /protein_id="YP_004390711.1" /db_xref="GI:330827759" /db_xref="GeneID:10485976" /translation="MSAQSIEPHYSTPLLALVSAIMDFPAPQTATSDDYDALIQQIDQ LCPLQHFGMLGLSDTGLNWLYAYKVSDIFKQQLGREQSRITDQLTQLDEAEGWCVFPI EHGQIQWLLARGTPADLPTLRLLLECLAKRLTETQAGSHLTELPSPLIRKDPNWKKKI ESISRIMRLANTLPAQALFSQLEAVLRQMLTIEDMLLVRLTSQKLEKIYPAHPHQGDE FISGLCHSTSNIEVSRESRYWHSMPLRLQQQYFAHFIISTAQPLETDDKLFLDFLRGQ LTLLLELRRIRQQLNDINTEDSINQRLQQLRQTNLRLQKQLKQHQELERRLQFDALHD PLTQLPNRALLMNHLNHAMTHYNRYKSPGFAVIFIDVDHFKQINDTLGHSAGDQLLKE VSRRLQTCIRQNDLVARLGGDEFVIYLDSSKSDDDISPVLNRIISRLSYPFRLLGNEL SITVSLGVSSVSEQTSDISQLLHQADLAMYQAKRNGRSRIVSYSDDCINQNWNSPEEM LARALREGRIVPYFQPVIRLQDSRLTGLEVMARWLTEEGILKDAFDFIPLAEQCGLIL ELDYQILRHTCQQLKNWLPISGQGKFKVAINLSGKHLVNHDHIMRLMGIIEEEGVAPG YLIFEFNERELSRQDSDALASLHDLRAKGIQISLDDFGTGFSSLNALFHFPVDYIKVD DSFTQRMLQSPKDLALIRAMRDICQDLDYTLVVEGIENQQQLQKLIDIGCRMGQGRYI SPPMPGADIVPLLTPANP" misc_feature complement(72919..73398) /locus_tag="B565_0059" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(73153..73155,73282..73284)) /locus_tag="B565_0059" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(73150..73161,73165..73167,73231..73233, 73243..73245,73255..73260,73267..73269)) /locus_tag="B565_0059" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(73090..73092,73177..73179)) /locus_tag="B565_0059" /note="I-site; other site" /db_xref="CDD:143635" misc_feature complement(72148..72867) /locus_tag="B565_0059" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:30163" gene complement(74476..74931) /locus_tag="B565_0060" /db_xref="GeneID:10485977" CDS complement(74476..74931) /locus_tag="B565_0060" /codon_start=1 /transl_table=11 /product="cytochrome c5" /protein_id="YP_004390712.1" /db_xref="GI:330827760" /db_xref="GeneID:10485977" /translation="MSVLKKLSYLLAVGMTAASLSGAVLAADEISPEAIAERIKPIGQ VYTAKDLEGIAGASAAPTAAASSGPRDGETVYKGACFACHDTGAAGAPKRGDKAAWDP RIAQGIDTLKKHAIEGFTGKSGMMPPRGTCANCSDEEIENAIHYMIDKL" misc_feature complement(74479..>74721) /locus_tag="B565_0060" /note="Cytochrome c; Region: Cytochrom_C; cl11414" /db_xref="CDD:196222" gene complement(75129..76157) /locus_tag="B565_0061" /db_xref="GeneID:10485978" CDS complement(75129..76157) /locus_tag="B565_0061" /codon_start=1 /transl_table=11 /product="L-threonine 3-dehydrogenase" /protein_id="YP_004390713.1" /db_xref="GI:330827761" /db_xref="GeneID:10485978" /translation="MKALSKLHKEVGIWMTDVPAPELGHNDLLIKIRKTAICGTDIHI YNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVRGFAIGDRVSGEGHITCGHCRNCRAG RTHLCRNTIGVGVNRPGAFAEYLVIPAFNAFKLPDNIPDELAAIFDPFGNAVHTALSF DLVGEDVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVAKE KLADVMSELGMTEGFDVGLEMSGVPSAFQEMLDKMNHGGKIAMLGIPPSTMAIDWNKV IFKGLFIKGIYGREMFETWYKMASLIQSGLDLSPIITHRFHIDEFQQGFDAMRSGHSG KVILSWDK" misc_feature complement(75135..76157) /locus_tag="B565_0061" /note="L-threonine 3-dehydrogenase; Validated; Region: tdh; PRK05396" /db_xref="CDD:180054" misc_feature complement(75144..76157) /locus_tag="B565_0061" /note="Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; Region: MDR; cl14614" /db_xref="CDD:196795" misc_feature complement(order(75294..75302,75369..75374,75438..75443, 75513..75515,75558..75560,75570..75575,75630..75647, 75702..75704,75714..75716,76029..76031,76038..76046)) /locus_tag="B565_0061" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176178" gene complement(76213..77403) /locus_tag="B565_0062" /db_xref="GeneID:10485979" CDS complement(76213..77403) /locus_tag="B565_0062" /codon_start=1 /transl_table=11 /product="2-amino-3-ketobutyrate coenzyme A ligase" /protein_id="YP_004390714.1" /db_xref="GI:330827762" /db_xref="GeneID:10485979" /translation="MSNGFYRHLTEQLNQVQAEGLYKQERIITSAQQASIAVGGEQVL NFCANNYLGLANHPDLIAAAHQGLDSHGFGMASVRFICGTQDQHKALEQKMSAFLGTE DTILYSSCFDANGGLFETLFGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMAEL EAQLKQADADGARFKLIATDGVFSMDGVIADLKSICDLADKYDALVMVDDSHAVGFIG ENGRGTHEYCGVMDRVDIITGTLGKALGGASGGYTSGKKEVIDWLRQRSRPYLFSNSL APSIVAATIKVIDMLAEGHDLRARLKENSRYFRERMSAAGFTLAGADHAIIPVMLGDA KLASEMASRMLAAGIYVVGFSFPVVPKGQARIRTQMSAAHTREQLDKAIDAFIRIGRE LGVI" misc_feature complement(76234..77391) /locus_tag="B565_0062" /note="7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]; Region: BioF; COG0156" /db_xref="CDD:30505" misc_feature complement(76234..77283) /locus_tag="B565_0062" /note="KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-...; Region: KBL_like; cd06454" /db_xref="CDD:99747" misc_feature complement(order(76303..76305,76675..76677,76684..76686, 76768..76773,76777..76779,76849..76854,76864..76866, 76999..77001,77071..77079,77257..77259)) /locus_tag="B565_0062" /note="substrate-cofactor binding pocket; other site" /db_xref="CDD:99747" misc_feature complement(order(76675..76677,76684..76686,76768..76773, 76777..76779,76852..76854,76864..76866,76999..77001, 77071..77079)) /locus_tag="B565_0062" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99747" misc_feature complement(76675..76677) /locus_tag="B565_0062" /note="catalytic residue [active]" /db_xref="CDD:99747" gene complement(77519..78163) /locus_tag="B565_0063" /db_xref="GeneID:10485980" CDS complement(77519..78163) /locus_tag="B565_0063" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_004390715.1" /db_xref="GI:330827763" /db_xref="GeneID:10485980" /translation="MKTRDRIIHSATELFNDQGERNITTNHIAAHMGISPGNLYYHFR NKEDIIHSIFDQYARHLSESFVPTRNREITLQDLMGYLDAIFYLMWQFRFFYANLPDI LSRDEPLQQKYLKAQEQMRSSVVALLRSLREGGIIDVSDEDLPDLGQTIKMVVTCWIP FQIAQAPNTRITKPLLYQGVLKVLFLLRPYVQPQVAGQIQQLEQHYRQLAQPAG" misc_feature complement(<77732..78160) /locus_tag="B565_0063" /note="Transcriptional regulator [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:31500" misc_feature complement(78005..78145) /locus_tag="B565_0063" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene 78322..79278 /locus_tag="B565_0064" /db_xref="GeneID:10485981" CDS 78322..79278 /locus_tag="B565_0064" /codon_start=1 /transl_table=11 /product="ADP-L-glycero-D-manno-heptose-6-epimerase" /protein_id="YP_004390716.1" /db_xref="GI:330827764" /db_xref="GeneID:10485981" /translation="MIVVTGGAGFIGSNLVKQLNAQGRTDIVVIDDLTDGTKFVNLVD LTIADYMDKDEFQARIVSGDEFEEWDNGIEVIFHEGACSATTEWNGKFIMEVNYEYSK DLFHYCIEREIPFIYASSAATYGGRNDNFIEDPKFEQPLNVYGYSKQLFDQYVRRWMP EINSQVVGLKYFNVYGPREQHKGSMASVAFHLNTQVKKGENPKLFEGCDGFPNGGQMR DFIYIDDVCKVNLWFWQNPQHSGIFNCGTGRAEPFQNVAEAVIKHHQKGAIEYIPFPD HLKGRYQSFTQADMTKLRSVGYDAEFKTVAEGVADYMAWLNR" misc_feature 78322..79275 /locus_tag="B565_0064" /note="ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs; Region: ADP_GME_SDR_e; cd05248" /db_xref="CDD:187559" misc_feature 78322..79275 /locus_tag="B565_0064" /note="ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional; Region: rfaD; PRK11150" /db_xref="CDD:182998" misc_feature order(78334..78339,78346..78354,78409..78417,78433..78435, 78478..78480,78556..78564,78568..78570,78595..78597, 78607..78609,78619..78621,78673..78681,78751..78753, 78763..78765,78832..78837,78841..78843,78862..78867) /locus_tag="B565_0064" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:187559" misc_feature order(78418..78423,78427..78432,78436..78438,78445..78450, 78454..78471,78475..78477,78583..78594,78601..78603, 78613..78615,78625..78627,78724..78726,78736..78750, 78757..78759,78769..78771,78778..78783,78790..78792) /locus_tag="B565_0064" /note="homopentamer interface [polypeptide binding]; other site" /db_xref="CDD:187559" misc_feature order(78574..78576,78838..78840,78871..78879,78883..78885, 78892..78894,78973..78975,79078..79080) /locus_tag="B565_0064" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187559" misc_feature order(78610..78612,78679..78681,78751..78753,78763..78765) /locus_tag="B565_0064" /note="active site" /db_xref="CDD:187559" gene 79397..81157 /locus_tag="B565_0065" /db_xref="GeneID:10485982" CDS 79397..81157 /locus_tag="B565_0065" /codon_start=1 /transl_table=11 /product="putative glycosyltransferase" /protein_id="YP_004390717.1" /db_xref="GI:330827765" /db_xref="GeneID:10485982" /translation="MNILMALSQLEVTGAEVYATTVGNELTRRGHHVFYVSDTLTKPT LGPVFKLRFNKRSILRRFWHVFYLIYLIKKHHIQLVHAHSRASGWSSYVACKLTGTPM ITTVHGRQPVHASRKAFHALGLRAVAVCEDIAHQIVDNLGVDPAIVQVLRNGIETDKF QPVPAPDNPKPVIAIIGRLSGPKGELCYRLLDEVLDLDACKVRIVSGTKVPERFARFE GRAEFVGYVDDVPALLASCDLVIGAGRVAMEALLCGRPAFAIGEARAIGLVTEQNLDD ALASNFGDIGPKDLAIDFAALEGEIEPALASKTVPEVIRQRIQDEYGLQGVVSGLETI YQDAVVETLRREMPVIMYHRFIEQDSEKGVHGTWMPITMFEKHLRLMKWLGYETLTFR DLADKGFIHRLQYGKKYLMITADDGYQDNLTRMLPLLEKYGYKAVVYVVTGEGYNRWD VEHPTNPDTKVSLMSGEQVKALAASGHVEIGGHTLTHPRLSKLTPEQQAHEIQENKRQ LEALLGHPLLSFAYPYGDMNESAKEQAITAGYRFAVATNSGPKAMHQDPFQIRRIAIF PRTDVFGLWRKIRGNYVFRK" misc_feature 79397..80419 /locus_tag="B565_0065" /note="Glycosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaG; COG0438" /db_xref="CDD:30787" misc_feature 79397..80275 /locus_tag="B565_0065" /note="This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core; Region: GT1_WavL_like; cd03819" /db_xref="CDD:99989" misc_feature order(79436..79438,79922..79930,80084..80086,80144..80146) /locus_tag="B565_0065" /note="putative ADP-binding pocket [chemical binding]; other site" /db_xref="CDD:99989" misc_feature 80612..81025 /locus_tag="B565_0065" /note="Polysaccharide deacetylase; Region: Polysacc_deac_1; cl12061" /db_xref="CDD:189245" gene 81161..82405 /locus_tag="B565_0066" /db_xref="GeneID:10485983" CDS 81161..82405 /locus_tag="B565_0066" /codon_start=1 /transl_table=11 /product="lipid A core - O-antigen ligase-like enzyme" /protein_id="YP_004390718.1" /db_xref="GI:330827766" /db_xref="GeneID:10485983" /translation="MAICSPLIMPFRSHLTHNLVQTSAFFFGALCLAIPSGYSYGPVL LSIMSLFVFWRADYWLAMSREAKILFWIFIFYFMVQAISISLDNGALKELDRPSRALM AAIILPLLSKHRVHLVSIMSGFALGAVISGFIAIYDKIYIGMERAFGDGMPIQSGNIS MTLGLFCLCAYFWHRENNEYVFSKIMLAACLMGMLGSFLSGTRGGWVLLPVIITTIVM HYQRSGRRYFLWVFTCIVIGGFGIISTPQTGVLDRIKTAKSDIVQFIDGENPDTSLGI RFQLWSSAWDAFQKKPIFGWGNNGIRQIHKQQLEQGKISEFIYNFNYHAHNQFLDEMA KRGIIGLFALCLVYFYPISVFYKYKKSLSMKYILMAVASLTLIDYSLSQAFISHNSGI VFFFVCFSLLITSLNETNKEEV" misc_feature 81236..82384 /locus_tag="B565_0066" /note="Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]; Region: RfaL; COG3307" /db_xref="CDD:33116" misc_feature 81722..82195 /locus_tag="B565_0066" /note="O-Antigen ligase; Region: Wzy_C; cl04850" /db_xref="CDD:194980" gene 82437..83345 /locus_tag="B565_0067" /db_xref="GeneID:10485984" CDS 82437..83345 /locus_tag="B565_0067" /codon_start=1 /transl_table=11 /product="family 2 glycosyl transferase" /protein_id="YP_004390719.1" /db_xref="GI:330827767" /db_xref="GeneID:10485984" /translation="MISIVLLNYNSSIYTIKCIESLLQSDYQDFEIIVVDNSSLSADV ELLAAGLNKINCNHIRLIKNKINHGFAMGNVIGANNAVGDYILFLNNDTTVEKNALKE LVSYMEKNNQVSLSIPSIYEVDGRRTASFAYLPGIINSIFGDKVYCAIKGRRFPDRKK EYCEPIYVEMGSGAAMCFRKSDYFKVGGFDSNYFLYCEEEDICLRLQRENMKVSYVPS SKIVHLGGGSTTRNINIEKEFYISLFYFLSKNYSWLSASVIKFKFILKELIRCVRFRG RWRVLFFMICSAKLGNSMRHHQRNVC" misc_feature 82437..83291 /locus_tag="B565_0067" /note="Predicted glycosyltransferases [General function prediction only]; Region: COG1216" /db_xref="CDD:31409" misc_feature 82446..83111 /locus_tag="B565_0067" /note="Subfamily of Glycosyltransferase Family GT2 of unknown function; Region: GT_2_like_c; cd04186" /db_xref="CDD:133029" misc_feature order(82545..82547,82707..82712) /locus_tag="B565_0067" /note="Probable Catalytic site [active]" /db_xref="CDD:133029" misc_feature order(82710..82712,83031..83033,83037..83039) /locus_tag="B565_0067" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:133029" gene 83591..84790 /locus_tag="B565_0068" /db_xref="GeneID:10485985" CDS 83591..84790 /locus_tag="B565_0068" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonic-acid transferase" /protein_id="YP_004390720.1" /db_xref="GI:330827768" /db_xref="GeneID:10485985" /translation="MLYKGYLGAYEGVWLSYGNAASAVGNVPGSLSAWLIGGPLLLWD SPYAPMVLLLAMRLVGFLLFDAVIRQVFDDRVRLLFLVLCWLNPWFQYESLLYNPSYL FLFSAMHCWSAWHMRERASFWHMIVHLLAIGMAMQLHYSWPLLAVMSTYLFWRRILKV SWSGVVVATLLIGASLIPYAMEVMSNSHITQNVDPEARQRYIGWGLVHVYPVLKSVLY WLRYGSWLFASKLVNDTQFIWLAGHEYLQMAAVWLWRVVIYGVGSATVLLAAKANWQL WRELKPRLLRSDRAPVDGESWLGLYALAAVLAVLVSAALSPIIFNYWHLMLIFPYALF PILLLLVRWSRRYPLWVGKGLLAATLFCTAVNLIAACDSTKFSYQADYKTQVLEYLQE MKLQPKQ" gene complement(84834..85373) /locus_tag="B565_0069" /db_xref="GeneID:10485986" CDS complement(84834..85373) /locus_tag="B565_0069" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390721.1" /db_xref="GI:330827769" /db_xref="GeneID:10485986" /translation="MRLFLLLLSLFAATVSSDEKPRLPYYDWGRCPFEGCTYKTWTTK QEVIVRAEPSLTAKALFRLPRGQQVEGLTGVVITEQPGIVEILRSVKLGYSKEGKGPL LNMKAGETLYILGGLGEGNSLFWYKGKTYILDYDYARKELRYGRSPQNQWWVKIRDKQ GREGWVAEAKNFAHMDRFE" gene 85673..86389 /locus_tag="B565_0070" /db_xref="GeneID:10485987" CDS 85673..86389 /locus_tag="B565_0070" /codon_start=1 /transl_table=11 /product="putative amino-acid ABC transporter" /protein_id="YP_004390722.1" /db_xref="GI:330827770" /db_xref="GeneID:10485987" /translation="MTISQAVAINAPLLGCVFQLAPLVTIDQQGEVSGPVIDYFRRHI EPAIGRTIEWQGLNVARLLSNLESGECDLTPLLSYSPERARHFRYIDPHLLLLRPVLV VLVPSRLHSVERQEDLFGTTIGWSSQAIVPPLLQHPQIHIDTLSQLSWEHGNMQKLLR GRIDAALFSNDISANHFRAKLPAATRLIYLPVTPLQVHIVLNKSLGDGNSELVQHMRQ MVERVPLASLVEPTPRLWGR" misc_feature 85730..86362 /locus_tag="B565_0070" /note="Bacterial periplasmic substrate-binding proteins; Region: PBPb; smart00062" /db_xref="CDD:128376" misc_feature 85730..86341 /locus_tag="B565_0070" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature order(85730..85732,85847..85849,85919..85921,86048..86050, 86180..86182) /locus_tag="B565_0070" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(86108..86110,86138..86140,86156..86158) /locus_tag="B565_0070" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 86255..86272 /locus_tag="B565_0070" /note="hinge residues; other site" /db_xref="CDD:29040" gene 86450..87271 /locus_tag="B565_0071" /db_xref="GeneID:10485988" CDS 86450..87271 /locus_tag="B565_0071" /codon_start=1 /transl_table=11 /product="AraC/XylS family transcriptional regulator" /protein_id="YP_004390723.1" /db_xref="GI:330827771" /db_xref="GeneID:10485988" /translation="MNTTDSLIRYWQSPHLPGVELSHSHHRAFSYGRHVHLDYHIGLV QRGGQKFIHKGNSHHLVRGVLSTVNPDEVHDGLSLLPEGYEVRVFAIDPQQLALWLPE QPEPFFDKGLQSRPDLYQGFAQLHGYLDNPKADGLLIESQLLALLGELLHLAPEVHQL ADPQLRFLRDYLMAALDEPHSLEELAGLLGLDRFAFLRQFKKRSGMTPYAWLKRLRLE QGKRLLASGMAVSEVALAVGFFDQSHFHHGFRQAFGLTPAEFRAQMQSFTSHAPR" misc_feature 86495..86842 /locus_tag="B565_0071" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" misc_feature 86984..87232 /locus_tag="B565_0071" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:128636" misc_feature 87119..87232 /locus_tag="B565_0071" /note="Bacterial regulatory helix-turn-helix proteins, AraC family; Region: HTH_AraC; pfam00165" /db_xref="CDD:143933" gene 87312..87947 /locus_tag="B565_0072" /db_xref="GeneID:10485989" CDS 87312..87947 /locus_tag="B565_0072" /codon_start=1 /transl_table=11 /product="LysE family transporter" /protein_id="YP_004390724.1" /db_xref="GI:330827772" /db_xref="GeneID:10485989" /translation="MLTSLFVTLGLMHLIALASPGPDFALILRTSLHRPTALGAALGI SLAIMVHATLSLTGISMLIASHPLLFMVIKCCGALYLGWLGWGALMAARQQSSPVMAS AANELRGWGRGVRTGLATNLLNPKALVFFIGLLAAMVTPEVDGMTRSLLVGELFIISL CWFGLLAWSLSTDRAQRLLLRVQRPLNLVTGVLFAVVSLSILVSMGAELVA" misc_feature 87366..87908 /locus_tag="B565_0072" /note="LysE type translocator; Region: LysE; cl00565" /db_xref="CDD:186083" gene 88005..89135 /locus_tag="B565_0073" /db_xref="GeneID:10485990" CDS 88005..89135 /locus_tag="B565_0073" /codon_start=1 /transl_table=11 /product="spermidine/putrescine-binding periplasmic protein-like protein" /protein_id="YP_004390725.1" /db_xref="GI:330827773" /db_xref="GeneID:10485990" /translation="MRLLPLCWLLGMTPALAAPVQLKLLEWGYLPAGYEQQFSDYAKA HGVEATVSRIEPLLTDFDSVYRALRTRSADVVLPTSYFYKAHHQPLFKLLLPIDFSRL QHYPEVKPALKNTEYDKQGERNYSVPFSYAMFSLAYDSKQVPQAPTSWQVLANSSPSG QFAEFCDQFEPLLFSVLLSLGKSPALFASGEMLADKTLQQEVEQQLSQRLRASRGFWF NQANRCEDLRQQTFATTWGLELVECNKQNDQQWRIAMVQEGAIYALDAISIARHVGDD PARLKAAYLLVDFLLSAPLQRQMLVGTPTISASNIASRPPLSPQEQAVLPDRPLPEFD ERLLVPALPAHIKNRYKRMVQQAIVASGKEGLVKQCPWDLDN" misc_feature 88089..88985 /locus_tag="B565_0073" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(89328..89492) /locus_tag="B565_0074" /db_xref="GeneID:10485991" CDS complement(89328..89492) /locus_tag="B565_0074" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390726.1" /db_xref="GI:330827774" /db_xref="GeneID:10485991" /translation="MDFAPHGWITRAGCRQCHREITYSSPSHKGQLRIVQLTSKLSQL RHFCTGSARV" gene 89526..90182 /locus_tag="B565_0075" /db_xref="GeneID:10485992" CDS 89526..90182 /locus_tag="B565_0075" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390727.1" /db_xref="GI:330827775" /db_xref="GeneID:10485992" /translation="MKKVVMVAVAAALLGGCAVKNQVSHSLQAIPLTAFQQSESNPNQ RVYKEPGVDLRQYNEVLLDPLQFIRQENGQWYLLTANEQNQIGRYYHDKFQSELIKQG VKIATAPGPKVMRIQAAVTNFDLTRPDPKLRDLLPAKIAINVTREVIGKEPYLLKVGS MAQLLDSRSGKLLVRVMDARETPDTTHKDSPITAGEMEKMIDQWAASRAKQLADNLGK " misc_feature 89631..90143 /locus_tag="B565_0075" /note="Protein of unknown function (DUF3313); Region: DUF3313; pfam11769" /db_xref="CDD:152205" gene 90437..90949 /locus_tag="B565_0076" /db_xref="GeneID:10485993" CDS 90437..90949 /locus_tag="B565_0076" /codon_start=1 /transl_table=11 /product="Hemolysin" /protein_id="YP_004390728.1" /db_xref="GI:330827776" /db_xref="GeneID:10485993" /translation="MNRHPCIKHWRELQEQTPRYYSGSQEPLSRGCALGKHFGFSRIG IHHEIVEPGHRTSWPHAEKTEDEFVHVLEGTPDVWLDGVLYRLQPGDSVGFKAGDGLA HAFINNTEETVRLLCIGNTDREDNRIHYAVHPERNITLGKLRWDDVPERELGDHDGLP DKLRESNGPF" misc_feature 90446..90940 /locus_tag="B565_0076" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene complement(91051..91551) /locus_tag="B565_0077" /db_xref="GeneID:10485994" CDS complement(91051..91551) /locus_tag="B565_0077" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390729.1" /db_xref="GI:330827777" /db_xref="GeneID:10485994" /translation="MNRDITVQFIKMLTNLDHCLAKAEAHAAAKQFNVENFFGERLIV DMLPLSKQVLICCDSARAVVATASHSELPVLGDDPKTMADLRAHLGKTISYLQGKLDA DYSQYASGRYVPHWAGGKGMDGHTCVHEYGIPNFYFHLTMAYALLRRAGVDLGKRDYL GGLNMQ" misc_feature complement(91069..91542) /locus_tag="B565_0077" /note="Domain of unknown function (DUF1993); Region: DUF1993; cl01567" /db_xref="CDD:154475" gene 91863..92060 /locus_tag="B565_0078" /db_xref="GeneID:10485995" CDS 91863..92060 /locus_tag="B565_0078" /codon_start=1 /transl_table=11 /product="Selenium-binding protein YdfZ" /protein_id="YP_004390730.1" /db_xref="GI:330827778" /db_xref="GeneID:10485995" /translation="MKIYDRNRNVLNLGQRVMIAATGAVDFLKEAHTDNMTPYQAEHE KCVLLANSGERYAPIELIRLG" misc_feature 91863..92057 /locus_tag="B565_0078" /note="putative selenium-binding protein YdfZ; Region: YdfZ_fam; TIGR03318" /db_xref="CDD:132361" gene 92322..92546 /locus_tag="B565_0079" /db_xref="GeneID:10485996" CDS 92322..92546 /locus_tag="B565_0079" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390731.1" /db_xref="GI:330827779" /db_xref="GeneID:10485996" /translation="MANWRRAWWPGGTWFFTVNLLERRNNRLLVEQIDLLRRSVAKVQ QAHLQDRAGCFLSKGFFESARYLASLSPRF" gene complement(93242..95413) /locus_tag="B565_0080" /db_xref="GeneID:10485997" CDS complement(93242..95413) /locus_tag="B565_0080" /codon_start=1 /transl_table=11 /product="DNA helicase II" /protein_id="YP_004390732.1" /db_xref="GI:330827780" /db_xref="GeneID:10485997" /translation="MDVSTLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIA WLMQVERCSPFSIIAVTFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHH LDAGLPQDFQILDSDDQYRLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDID LYGDPVTRTYQQIYETYQETCDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNIL VDEFQDTNGIQYAWLRMLAGNSGKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAET IRLEQNYRSTANILKAANSVIANNAERLGKELWTEGAEGEPISLYAAFNEVDEARFVV GRLKDWKEKGGLLADCAILYRSNAQSRVLEEALMQDAMPYRIYGGLRFFERQEIKDAM AYLRLINNRGDDASFERVVNTPTRGIGDRTLEILRGNARDQGLNLWQSAKALLNDKVL TGRAGNAVRGFVDLIDALEEQVSLLPLHQQADIAIQNSGLKAMYLAEKGEKSQARVEN LDELVTACRQYQRPDELEDMSDLSAFLAHAALESGENQADEYADAVQLMTLHSAKGLE FPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCYVGMTRAMEKLYICYAESRRIYGRE MFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFSQNEVQQSFDASGIKLGQRVLHP KFGEGVVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARLEAL" misc_feature complement(93245..95413) /locus_tag="B565_0080" /note="DNA-dependent helicase II; Provisional; Region: uvrD; PRK11773" /db_xref="CDD:183307" misc_feature complement(93968..95386) /locus_tag="B565_0080" /note="UvrD/REP helicase; Region: UvrD-helicase; cl14126" /db_xref="CDD:196784" gene 95921..96919 /locus_tag="B565_0081" /db_xref="GeneID:10485998" CDS 95921..96919 /locus_tag="B565_0081" /codon_start=1 /transl_table=11 /product="periplasmic component/surface lipoprotein" /protein_id="YP_004390733.1" /db_xref="GI:330827781" /db_xref="GeneID:10485998" /translation="MTKVLKLATVASLTLAALSAQAASEPAVIYDTAGKYDKSFNEAV FRNGVELYNKDKGVKVKEFEPQNEAQREQGLRRLASRGNGPIVAVGFNMGSAVEKVAT EFPKTQFTIIDMVVDKPNVQSVIFKEHEGSFLVGALAAIASKSGKVGFVGGMDIPLIR KFQCGYEQGAKFVNPKIEVFQNMAGSTPAAFADPAKGAELAKSQFAKGADVVYAAAGG TGIGVYQAAKDSGKFAIGVDSNQNHLQPGTMLTSMVKSVGLAAYQTWDDAAKGEWKPG IKNLGLAEGGVDWALDKDNEKLITPEMKAKVDAIKAEIIAGKVKVHDYMSDNTCKY" misc_feature 95993..96787 /locus_tag="B565_0081" /note="Periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea; Region: PBP1_BmpA_PnrA_like; cd06354" /db_xref="CDD:107349" misc_feature order(96011..96016,96041..96043,96257..96259,96395..96397, 96491..96493,96569..96571,96632..96634,96683..96685) /locus_tag="B565_0081" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:107349" gene 97005..98570 /locus_tag="B565_0082" /db_xref="GeneID:10485999" CDS 97005..98570 /locus_tag="B565_0082" /codon_start=1 /transl_table=11 /product="ABC transporter nucleotide binding/ATPase protein" /protein_id="YP_004390734.1" /db_xref="GI:330827782" /db_xref="GeneID:10485999" /translation="MDQTDRYAIELRGIDKRFGEVYANKLIDLKVRKGSIHGIVGENG AGKSTLMSIIYGFYHADKGEMLIDGNPFKPHGSQDAIAAGVGMVHQHFMLVNNFTVLE NVILGAENGWHLQQSVASAEKLLGELARDYGLDVPLHEKVEDLPVGLQQRVEILKALY RGARILILDEPTGVLTPQEADHLFEVLKKLRDQGATIILITHKLREILAITDQVSIMR RGEMVAHVATKDTDKEQLAELMVGRKVRLKVDKGPTQPGEAKLKIEGLSYFDASKVER VKSVSFEVRAGEVVGIAGVSGNGQSELLSLLGGILKPSKGSFTISSRSGVHKVSAEHP ADPELVRNYGLGHVPEDRHKMGLINRFEAKEAFILGYHRRPQYNKGWLQNKEAIQQDC QAKMEKWDVRPPHPDHKTANFSGGNQQKLVIAREVEQDPDVLLIGQPTRGVDIGAIEY IHQQIIAMRDKGKAVLLVSVELDEIMSLADRILVIADGRIVGELDGAKADERTIGLMM ANIVPDDVAKEAH" misc_feature 97020..98531 /locus_tag="B565_0082" /note="ABC-type uncharacterized transport systems, ATPase components [General function prediction only]; Region: COG3845" /db_xref="CDD:33636" misc_feature 97029..97679 /locus_tag="B565_0082" /note="This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and...; Region: ABC_Carb_Monos_I; cd03216" /db_xref="CDD:72975" misc_feature 97125..97148 /locus_tag="B565_0082" /note="Walker A/P-loop; other site" /db_xref="CDD:72975" misc_feature order(97134..97139,97143..97151,97272..97274,97509..97514, 97608..97610) /locus_tag="B565_0082" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72975" misc_feature 97263..97274 /locus_tag="B565_0082" /note="Q-loop/lid; other site" /db_xref="CDD:72975" misc_feature 97356..97385 /locus_tag="B565_0082" /note="ABC transporter signature motif; other site" /db_xref="CDD:72975" misc_feature 97497..97514 /locus_tag="B565_0082" /note="Walker B; other site" /db_xref="CDD:72975" misc_feature 97521..97532 /locus_tag="B565_0082" /note="D-loop; other site" /db_xref="CDD:72975" misc_feature 97596..97616 /locus_tag="B565_0082" /note="H-loop/switch region; other site" /db_xref="CDD:72975" misc_feature 97773..98474 /locus_tag="B565_0082" /note="This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (; Region: ABC_Carb_Monos_II; cd03215" /db_xref="CDD:72974" gene 98570..99688 /locus_tag="B565_0083" /db_xref="GeneID:10486000" CDS 98570..99688 /locus_tag="B565_0083" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="YP_004390735.1" /db_xref="GI:330827783" /db_xref="GeneID:10486000" /translation="MSQVRIPAWVSVGVLSAVNILLAFLVSAILFYYLDINPVDAAKI MWYGAFGTGEGVGFTLYYATGFIFTGLSVAVAFHAGLFNIGGEGQAYIGGLGVGLVCL MLGDVLPFALLLPLSIIAGGLFGAAWAFIPAWLQAKRGSHIVITTIMFNFIAASLMAY LLVEVFKPPGSMATESKVFAEASWLPKMSGLANLFGMEIPNSPLNISFFWALICAALV WVFIWHTRWGYEIRSVGASQSASAYAGISYPKVVILAMVISGILSGFFALNVLQGELH QIKLNFVEGFGFTGIAVALMGRNHPVGVIIASLLFGFLYQGGAELSFEFGVDRNIVVV LQGLVILFCGALEHMMRPRIEQLYLAFANRSAAQAKGV" misc_feature 98756..99595 /locus_tag="B565_0083" /note="Transmembrane subunit (TM) of Treponema pallidum (Tp) RbsC-1, RbsC-2 and related proteins. This is a functionally uncharacterized subgroup of TMs which belong to a larger group of TMs of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (; Region: TM_PBP1_transp_TpRbsC_like; cd06580" /db_xref="CDD:119322" misc_feature 99284..99340 /locus_tag="B565_0083" /note="TM-ABC transporter signature motif; other site" /db_xref="CDD:119322" gene 99691..100656 /locus_tag="B565_0084" /db_xref="GeneID:10486001" CDS 99691..100656 /locus_tag="B565_0084" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="YP_004390736.1" /db_xref="GI:330827784" /db_xref="GeneID:10486001" /translation="MFEILILMLDATIRTAPPLILAAMAGMFCERSGVVNIALEGKLL AAAFASGAAAAVSGSAWVGLGAGVGVSILFALMHGFATITHRGDQVVSGMAINILAAG LTVTLGRYWFDQGGQTPALSGDARFAPIDLPYAKELWDVPVIGQLYSELLSGHSLLEY VAFACVPLAWWVMFRTRFGLRLRAVGEAPAAVDTAGISVVRMRYIALLIGGLLAGIGG TYLAVAQTAQFIPNMSAGKGFMALAALVFGKWRPWNAMAACLLFGFLDAVAIRLQGVS IGGFAIPVQAIEALPYILTVFLLAGFIGRAVAPKALGTPYVKERE" misc_feature 99736..100587 /locus_tag="B565_0084" /note="Transmembrane subunit (TM) of Treponema pallidum (Tp) RbsC-1, RbsC-2 and related proteins. This is a functionally uncharacterized subgroup of TMs which belong to a larger group of TMs of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (; Region: TM_PBP1_transp_TpRbsC_like; cd06580" /db_xref="CDD:119322" misc_feature 100258..100314 /locus_tag="B565_0084" /note="TM-ABC transporter signature motif; other site" /db_xref="CDD:119322" gene complement(100923..102914) /locus_tag="B565_0085" /db_xref="GeneID:10486002" CDS complement(100923..102914) /locus_tag="B565_0085" /codon_start=1 /transl_table=11 /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase" /protein_id="YP_004390737.1" /db_xref="GI:330827785" /db_xref="GeneID:10486002" /translation="MKTTLKLSAVAVIFLLSGCDDNNSQAPGDLTLRLIETSDIHSNL LSYDYYQNKPDASLGFARTAVLIRKAREENANNLLIDNGDLIQGTPLADYIHDQQVKQ QWLSKQTHPAIKALNTMSYDVGNLGNHEFNFGLDFLSETLKGANYPYINANVFQADAF SRDGKGTIDWSKQKFKPYVVLDRQVKDANGNTQTIKVGVLGLTPPQITQWDKRNLEGK VVVADMVETAEHYVPEIRAKGADIVVVVAHTGIIGDPREPMMENAALPLAKVKGVDAL LLGHAHRTFPGDYPNMTDVDNEKGTLAGVPTVMPGVWGNHLGIIDLHMTWKEGRWEVA SSQSQLRKIDSSATGTEDQAVVDQVIAEHEQANQWLDEPLSKITKPIHSFFALVQDDP SIQIVSDAQLWHAKKLQQDGQLKEKWPILSAAAPFRGGRNGPTDFTYVPAGDISLRNV ADLYVYPNTLQVVAINGATVQEWLEKSAVQFNKIDAASTATQWLVNEKYRTYNFDVID GVNYQVDVTKPTRYDVDGNKVSDSYRITNLTYQGKAIDPAQMFYVVTNNYRASGGGNF PGINAKVIVHEDQFETREVLSEYLKDLAEKNPAGFEPPADNNWQLAPLPANLDLRIYS SPRSEAQALTGGKLNYVETLPPTDAKHPGFGVYKLVLAP" misc_feature complement(100929..102914) /locus_tag="B565_0085" /note="bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed; Region: cpdB; PRK09420" /db_xref="CDD:181840" misc_feature complement(101886..102821) /locus_tag="B565_0085" /note="Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain; Region: MPP_CpdB_N; cd07410" /db_xref="CDD:163653" misc_feature complement(order(102069..102071,102075..102077, 102171..102173,102528..102533,102663..102665, 102792..102794,102798..102800)) /locus_tag="B565_0085" /note="active site" /db_xref="CDD:163653" misc_feature complement(order(102069..102071,102075..102077, 102171..102173,102531..102533,102663..102665, 102792..102794,102798..102800)) /locus_tag="B565_0085" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163653" misc_feature complement(101205..101798) /locus_tag="B565_0085" /note="5'-nucleotidase, C-terminal domain; Region: 5_nucleotid_C; pfam02872" /db_xref="CDD:190457" gene 102927..103097 /locus_tag="B565_0086" /db_xref="GeneID:10486003" CDS 102927..103097 /locus_tag="B565_0086" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390738.1" /db_xref="GI:330827786" /db_xref="GeneID:10486003" /translation="MLWVCQRGAFYRQQKNPIVSRLAIRANYSLVNRVMALIFICFLS FFRAATFAAFPP" gene 103273..104214 /locus_tag="B565_0087" /db_xref="GeneID:10486004" CDS 103273..104214 /locus_tag="B565_0087" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390739.1" /db_xref="GI:330827787" /db_xref="GeneID:10486004" /translation="MKMHNKALLAIACAAALSACDSEKAANSIAKRVPLALPEAGLYQ ANLMSRDGDKATPRMIKELDGLALVYPKGETVQHWGVWVDHQVGKVETNSQWLGQADQ KADKDGIYPVQLIRNSERLGTSTALSSVTNDHNLITFQDQPVIDLQGKESKRWVFDFT RTGTKFSDNSPIYSGFSGHVAVTALTTKAVTTASWSATGSDGFSSDMVGKVDTTNNGG KLTVAIEFPAAGCTLVGEGSATAGLSKLTMTGFGKCNFKQSAAATPIENLWNAALARA MDNRVAYVTTYTTDAKKEALVIGFPDTNGLLITADKR" gene complement(104295..105719) /locus_tag="B565_0088" /db_xref="GeneID:10486005" CDS complement(104295..105719) /locus_tag="B565_0088" /codon_start=1 /transl_table=11 /product="Magnesium transporter" /protein_id="YP_004390740.1" /db_xref="GI:330827788" /db_xref="GeneID:10486005" /translation="MSLPIKNSARQRADDRSRILTLLLRDDALTDSLLDPQVVQDAEQ RDQTSELTTLVNGLPAADVADALESLPPDERHALWALVEEEKRGQILVEASETVWDSL ISGMSDKELLHALRTLDIDDQIYLGQYLPRNLMGRLLTYMAPAERDRVREVIRYGKHT VGAMMDFEIITIRPEVTLATVQRYLRLRGKIPANTDKLFVIDRRNHLLGELALTTVLL HKPATLVSDVMERDPVTFDPEDNDEAAARTFERDDLLSAAVVDGKGKLMGRLTVEEVV DLVYEESDTDLRRMGGISEDEDVFAPVSKAVKTRWAWLAINLCTAFVASRVIGLFEHT ISQLVALAALMPIVAGIGGNTGNQTITMIVRALALQHIQAGNLSFLLLRELGVAFING LVWGGTMGIATYLLYQDAALGAVMTLAMMLNLLVAALMGVIIPMTMTRLGRDPAVGAS VMITAITDTGGFFIFLGLATLFLL" misc_feature complement(104298..105605) /locus_tag="B565_0088" /note="Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]; Region: MgtE; COG2239" /db_xref="CDD:32420" misc_feature complement(105252..105548) /locus_tag="B565_0088" /note="MgtE intracellular N domain; Region: MgtE_N; cl15244" /db_xref="CDD:197452" misc_feature complement(104883..105209) /locus_tag="B565_0088" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain in the magnesium transporter, MgtE. MgtE and its homologs are found in eubacteria, archaebacteria, and eukaryota. Members of this family transport Mg2+ or other...; Region: CBS_pair_Mg_transporter; cd04606" /db_xref="CDD:73106" misc_feature complement(104313..104633) /locus_tag="B565_0088" /note="Divalent cation transporter; Region: MgtE; cl00786" /db_xref="CDD:120115" gene complement(105866..107266) /locus_tag="B565_0089" /db_xref="GeneID:10486006" CDS complement(105866..107266) /locus_tag="B565_0089" /codon_start=1 /transl_table=11 /product="Uroporphyrin-III C-methyltransferase" /protein_id="YP_004390741.1" /db_xref="GI:330827789" /db_xref="GeneID:10486006" /translation="MDYLPIFCRLDNKPVLLVGGGEVAERKARLLLDAGAQLTVVAPE LDPELAELAANGSIEWLAGEFAPQQLAGKWLVVAATDRREVNALVYQSANQARIFANV VDDPKRSSFIMPSIIDRSPLMVAISSGGKAPVLARLLREKLEALLPQHLGAVATFAGS LRERVKARFATMGERRRFWERLLGADRLGQALARGDSASAHQLADNLFADGSQTGGEV VLVGAGPGDPGLLTLHALRQMQQADVVVYDRLVSDEVMALVRRDAKRIFVGKQAGNHC VPQEGINQLLLEEAKKGQRVVRLKGGDPFIFGRGGEELETLVGTGIGFQVVPGITAAS GCAAYAGIPLTHRDHAQSVRFVTAHGKGGARDLDWPLLAKDKQTLVFYMGLSSCATIR EQLLAHGKAGDTPVALIERGTQPCQRVIRGTLDELPALAVGVESPALIMVGSVVTLAD RLAWFGEAPQRQRALA" misc_feature complement(105902..107266) /locus_tag="B565_0089" /note="siroheme synthase; Provisional; Region: cysG; PRK10637" /db_xref="CDD:182606" misc_feature complement(106868..107254) /locus_tag="B565_0089" /note="precorrin-2 dehydrogenase; Validated; Region: PRK06719" /db_xref="CDD:180668" misc_feature complement(106640..106822) /locus_tag="B565_0089" /note="Sirohaem synthase dimerisation region; Region: CysG_dimeriser; pfam10414" /db_xref="CDD:150995" misc_feature complement(105893..106621) /locus_tag="B565_0089" /note="Tetrapyrrole (Corrin/Porphyrin) Methylases; Region: TP_methylase; cl00304" /db_xref="CDD:197405" gene complement(107279..108091) /locus_tag="B565_0090" /db_xref="GeneID:10486007" CDS complement(107279..108091) /locus_tag="B565_0090" /codon_start=1 /transl_table=11 /product="Nitrite transporter" /protein_id="YP_004390742.1" /db_xref="GI:330827790" /db_xref="GeneID:10486007" /translation="MYTETINKCAANAARINRFERSDKLGFWLSSAMAGAYVGLGIIL IFTLGNLVDPAIRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKTGKITMADLL RILPQTWAGNLIGSIVVALIYSYGGSLLPDAGSLAHKVALAKTQAPTLTLFMKGILCN WLVCLAIWMALRTEGAARFIAIWWCLLAFIASGYEHSIANMTLFALSWFGAHSDAYTL GGIGHNLLWVTLGNTVSGVLFMGLGYWYATPKAERPVAVSETTSTANQTQTA" misc_feature complement(107291..108091) /locus_tag="B565_0090" /note="Formate/nitrite transporter; Region: Form_Nir_trans; cl00927" /db_xref="CDD:193975" gene complement(108228..108548) /locus_tag="B565_0091" /db_xref="GeneID:10486008" CDS complement(108228..108548) /locus_tag="B565_0091" /codon_start=1 /transl_table=11 /product="Nitrite reductase (NAD(P)H), small subunit" /protein_id="YP_004390743.1" /db_xref="GI:330827791" /db_xref="GeneID:10486008" /translation="MMKLACQLNDILPGTGVCALIEGRQIALFRPSAAAEVFAIDNRD PFFAANVLSRGLICEHDGELWVASPLKKQRFRLSDGHCFDNPAMSVQSYPVEVRDQQV WVAV" misc_feature complement(108234..108536) /locus_tag="B565_0091" /note="Assimilatory nitrite reductase (NirD) family, Rieske domain; Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium. Members include bacterial and fungal proteins. The bacterial NirD contains a single Rieske domain...; Region: Rieske_NirD; cd03529" /db_xref="CDD:58552" gene complement(108545..111124) /locus_tag="B565_0092" /db_xref="GeneID:10486009" CDS complement(108545..111124) /locus_tag="B565_0092" /codon_start=1 /transl_table=11 /product="Nitrite reductase [NAD(P)H], large subunit" /protein_id="YP_004390744.1" /db_xref="GI:330827792" /db_xref="GeneID:10486009" /translation="MMFYYSKLEAIMSKVRLVVVGNGMVGHRFIEELIERADPGRYEI TVFGAEPRPAYDRVHLSSYFSHHTSEDLSLVKPGFYDKHGIRLLLGEAVKKIDRANRE VHSNKGTVVGYDKLVLATGSYPWVPPIAGSQHHECFVYRTIEDLKAIRSAARSGKSGV VIGGGLLGLEAAGALKALGLETHVVEFAPVLMAEQLDGQGGQLLRRKIESMGVQVHTS KSTSEILMHGGEQAKHRLAFADGSQLEVDVVVFSTGIRPQDTLGRYGDLAIAERGGIV IDDHCLTSDPDIYAIGECAAWQGRFFGLVAPGYKMAQITVDHLQGGDSRFEGADMSAK LKLLGVSVGSIGDAHGRTPGSHSYVFQDDQAGVYKKIVVSEDNSRLLGAVLVGDVEDY GNLLQMMLNALPLPSHPDTLILPAYAGAKPTLGVDALPESAQICSCFDVSKGDIAKAV AEGHTTLAAIKQHTKAGTGCGGCVPLISQVLNAELVKQGIEVNNHLCAHFPHSRQELF HLVKVEGIKSFDELLAKHGQGYGCEVCKPTVGSILASCWNEHVLSPRNIPLQDTNDIF LGNMQKDGSYSVIPRMAGGEVTPEGLLAVAEVARDYKLYTKITGAQRIGLFGAQKDDL PAIWRKLLAAGFETGQAYAKALRMAKTCVGSTWCRFGVQDSVGLGVFLENRYKGIRTP HKMKFGVSGCTRECAEAQGKDVGIIATDAGWNLYVGGNGGMKPRHADLLASDLDRETL IKLIDRFMMFYVTSADKLQRTSVWLGNLEGGVDYLREVIVDDKLGLAETLERDIQTLI DSYECEWSRTLSEEEALKRFSHFINSDKRDPDVQFVSERDQHRPATPAERIPVYQIEV ETK" misc_feature complement(108551..111091) /locus_tag="B565_0092" /note="nitrite reductase subunit NirD; Provisional; Region: PRK14989" /db_xref="CDD:184951" misc_feature complement(109670..109828) /locus_tag="B565_0092" /note="BFD-like [2Fe-2S] binding domain; Region: Fer2_BFD; cl01093" /db_xref="CDD:194032" misc_feature complement(109223..109414) /locus_tag="B565_0092" /note="Nitrite/Sulfite reductase ferredoxin-like half domain; Region: NIR_SIR_ferr; pfam03460" /db_xref="CDD:190643" gene complement(111388..112476) /locus_tag="B565_0093" /db_xref="GeneID:10486010" CDS complement(111388..112476) /locus_tag="B565_0093" /codon_start=1 /transl_table=11 /product="inner membrane transport permease ybhR" /protein_id="YP_004390745.1" /db_xref="GI:330827793" /db_xref="GeneID:10486010" /translation="MLIRLWWLIRKELQALMGNTQGRFLLIMPVLLQTALFPFAATLE VTGNTLAIYNQDGGAQSRELLERLTHMPAFTTIIPVQGEAGMTEAITGQQALLGLIIP GDFSRRLARGEPAKVQLIIDGRRSNGGQVAAGYISQVIARWQSEGKGQPELAVRNLYN PNVEFHWHILPALVAIITTTGCLIVTALSVAREREEGTFDQLLVSPLTAGWIMAGKAV PGIMVAVGQGCIVALAARFVFHLPFAGSLSLLMAGMVCYGLALAGIGLFISSFCSTQQ QAFLGVFSFTVPAVILSGYISPVENMPQVFQWLAAIDPLTHFIVLLKGVFLKGFDWSA AWPLLWPLLAIAGVTLSLALAMFRRHIA" misc_feature complement(111496..>111963) /locus_tag="B565_0093" /note="ABC-2 type transporter; Region: ABC2_membrane; cl11417" /db_xref="CDD:196223" gene complement(112480..113589) /locus_tag="B565_0094" /db_xref="GeneID:10486011" CDS complement(112480..113589) /locus_tag="B565_0094" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="YP_004390746.1" /db_xref="GI:330827794" /db_xref="GeneID:10486011" /translation="MSINRRRLLALCRKETLQIVRDPSSILIAFIMPVVLLVVMGYAI NLDVDHLRLGIWRTDSGAPAVRLEQALRGSTALEIHSGPSKESLLTSLARGEIRGLLV IDDGFSRALAGQGNGTPQALLLTDGSEPNTANFVTNYVQGIWQGWLAGEGIAMPVSIE SRAWFNPALVSRNFLVPGSIAVVMTIIGALLTSLVVAREWERGTMEALLATPVTKGEL LLSKLLPYYGLGIIAMLLCLLFSVAVMGVPWRGSLLLLFLVTSVFLGSALGLGLFLST VMRSQFNAAQAALIAAFLPAVMLSGFVFEIASMPPLLRAITHLIPARYFASSLQTLYQ AGSVFSILLVNGFCLLLLAGFWLALTARKTRRTLE" misc_feature complement(<112948..113577) /locus_tag="B565_0094" /note="ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism]; Region: NatB; COG1668" /db_xref="CDD:31854" misc_feature complement(112555..>113136) /locus_tag="B565_0094" /note="ABC-type multidrug transport system, permease component [Defense mechanisms]; Region: COG0842" /db_xref="CDD:31184" misc_feature complement(<112948..113103) /locus_tag="B565_0094" /note="ABC-2 type transporter; Region: ABC2_membrane; cl11417" /db_xref="CDD:196223" gene complement(113586..115340) /locus_tag="B565_0095" /db_xref="GeneID:10486012" CDS complement(113586..115340) /locus_tag="B565_0095" /codon_start=1 /transl_table=11 /product="multidrug ABC transporter ATPase" /protein_id="YP_004390747.1" /db_xref="GI:330827795" /db_xref="GeneID:10486012" /translation="MNSAISLEGLTKRFGERVALNAISATIPTGGITGLVGPDGAGKS TLLRLLAGLLIPEAGTIRVLGLDPVSEGDLLRQRLGYMPQQFGLYEDLSVQENLTLYA DLHGVLEPERTPTFARLLAFTDLARFTARPAGKLSGGMKQKLGLACALLGTPDVLLLD EPGVGVDPISRRALWQMVRELAKGGMTVLWSTAYLDEAELCDHVLLMADGEVRTSGTP ADLMGAMASRCWLLEAGQLDGRERRALLRRALAHPAVMDGAVAGERVRLLLHPGMTPP PLPELQLANGAFQPAQPRLEDAFIDLLGGGPGGESSLAAGMREAELPQGVSPEAVIEA RHLTKRFGDFAATDDVSFAVRRGEIFGLLGPNGAGKSTTFKMECGLLRPSEGQALVTG IDLAHSPSAARQRLGYMAQKFSLYKQLTVAQNLSFFAGIYGLFGRHQQTRIDAMVTAF ALTPWLDQKAESLPLGLRQRLSLACALLHEPPLLFLDEPTSGVDPVTRREFWSHINAL ADHGVTVLVTTHFMDEAEYCDRIALIYRGKLLALGTPDDLKGLAAKEAATSLPTGSLP TMEEAFITLVERASEEDA" misc_feature complement(114705..115328) /locus_tag="B565_0095" /note="This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding...; Region: ABC_DR_subfamily_A; cd03230" /db_xref="CDD:72989" misc_feature complement(114441..115307) /locus_tag="B565_0095" /note="daunorubicin resistance ABC transporter ATP-binding subunit; Region: drrA; TIGR01188" /db_xref="CDD:130256" misc_feature complement(115209..115232) /locus_tag="B565_0095" /note="Walker A/P-loop; other site" /db_xref="CDD:72989" misc_feature complement(order(114762..114764,114858..114863, 115089..115091,115206..115214,115218..115223)) /locus_tag="B565_0095" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72989" misc_feature complement(115089..115100) /locus_tag="B565_0095" /note="Q-loop/lid; other site" /db_xref="CDD:72989" misc_feature complement(114906..114935) /locus_tag="B565_0095" /note="ABC transporter signature motif; other site" /db_xref="CDD:72989" misc_feature complement(114858..114875) /locus_tag="B565_0095" /note="Walker B; other site" /db_xref="CDD:72989" misc_feature complement(114840..114851) /locus_tag="B565_0095" /note="D-loop; other site" /db_xref="CDD:72989" misc_feature complement(114756..114776) /locus_tag="B565_0095" /note="H-loop/switch region; other site" /db_xref="CDD:72989" misc_feature complement(113607..114350) /locus_tag="B565_0095" /note="ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]; Region: NatA; COG4555" /db_xref="CDD:34199" misc_feature complement(113694..114347) /locus_tag="B565_0095" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(114228..114251) /locus_tag="B565_0095" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature complement(order(113781..113783,113877..113882, 114108..114110,114225..114233,114237..114242)) /locus_tag="B565_0095" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature complement(114108..114119) /locus_tag="B565_0095" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature complement(113925..113954) /locus_tag="B565_0095" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature complement(113877..113894) /locus_tag="B565_0095" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature complement(113859..113870) /locus_tag="B565_0095" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature complement(113775..113795) /locus_tag="B565_0095" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene complement(115337..116305) /locus_tag="B565_0096" /db_xref="GeneID:10486013" CDS complement(115337..116305) /locus_tag="B565_0096" /codon_start=1 /transl_table=11 /product="membrane fusion protein family auxiliary transport protein" /protein_id="YP_004390748.1" /db_xref="GI:330827796" /db_xref="GeneID:10486013" /translation="MKQRIAIVALLLTVIGGYLWWQGRPADGSILYGNVDIRDVNLAF RVGGRVDQVLVDEGDRVKAGQLLARLDPAPLTHSRDSARANLAALTAANALIHKGYRS EETDRARAALAAAEAAALEADQQWRRQSALAATGAISRGQLDTARSQRDQTRAQVRSA REQLAQLETGYRPEEIAQSDAQLEGAKAALASAELALADASLTAPSDGIIISRAIENG SMVQSGATAFNLSLTAPVWVRAYVEEPWLGHFPSGARVTLTTDSRPDQPYHGVVGFVS PTAEFTPKSVETPDLRTHLVYRLRIVVQDPDPALRQGMPVTVRLAP" misc_feature complement(115340..116293) /locus_tag="B565_0096" /note="putative efflux pump membrane fusion protein; Provisional; Region: PRK03598" /db_xref="CDD:179602" misc_feature complement(116096..>116170) /locus_tag="B565_0096" /note="Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2...; Region: Biotinyl_lipoyl_domains; cl11404" /db_xref="CDD:197439" gene complement(116302..116943) /locus_tag="B565_0097" /db_xref="GeneID:10486014" CDS complement(116302..116943) /locus_tag="B565_0097" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_004390749.1" /db_xref="GI:330827797" /db_xref="GeneID:10486014" /translation="MNPTRQKLLDTGLAIATEKGLRGLTVRELAAAAEVNLGSFVYHF GNRDAFIDELVELWYAPLYDELKSVAAKGSYPSAIAMFEATMEALIGLVARQRGFINH LFGDALAGEGAAQRFLLSLPRRHPLLLIEQVRMAQAEGSLVAGHPLQLMIFIMGSVGL PLVIAGSGRQLGWLPEQAAPFISQIDNPEAARQRLVWALRGLRPTDMKEGEAA" misc_feature complement(116782..116922) /locus_tag="B565_0097" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene complement(117150..118478) /locus_tag="B565_0098" /db_xref="GeneID:10486015" CDS complement(117150..118478) /locus_tag="B565_0098" /codon_start=1 /transl_table=11 /product="ATP-dependent protease ATPase subunit HslU" /protein_id="YP_004390750.1" /db_xref="GI:330827798" /db_xref="GeneID:10486015" /translation="MSEMTPREIVHELDRHIIGQADAKRAVAVALRNRWRRMQLNEEM RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD LTDAAIKLVRETEMEKMKYRAEEAAEERILDALLPNPRNTWGEEEKADNSNTRQIFRK KLREGQLDDKEIELELSASPMGVEIMTPPGMEEMANQLQGLFQNLGQNQKKKRKIKVK EAMKALIEEEAARLVNPEELKQKAIAAVENNGIVFLDEIDKICKRGESSGPDVSREGV QRDLLPLVEGCTVNTKHGMVKTDHILFVASGAFQIAKPSDLIPELQGRLPIRVELTAL TTDDFERILTEPNASLTDQYKALMATEGVNIEFTKDGIRRLAEAAWQVNERTENIGAR RLHTVMERLMEDISYDASEKSGETFVIDTDYVNAHLGALVEDEDLSRFIL" misc_feature complement(117153..118478) /locus_tag="B565_0098" /note="ATP-dependent protease ATP-binding subunit HslU; Provisional; Region: hslU; PRK05201" /db_xref="CDD:179962" misc_feature complement(<118053..118427) /locus_tag="B565_0098" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(118287..118310) /locus_tag="B565_0098" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(118284..118307) /locus_tag="B565_0098" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(117495..>117791) /locus_tag="B565_0098" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" gene complement(118558..119091) /locus_tag="B565_0099" /db_xref="GeneID:10486016" CDS complement(118558..119091) /locus_tag="B565_0099" /codon_start=1 /transl_table=11 /product="ATP-dependent protease subunit HslV" /protein_id="YP_004390751.1" /db_xref="GI:330827799" /db_xref="GeneID:10486016" /translation="MTTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVL AGFAGGTADAFTLLERFEAKLQAHQGNLERAAVALAKDWRTDRALRRLEALLAVADEH KSFIITGNGDVVQPEHDLIAIGSGGNFAQSAAIALLENTELDARTIVEKSLKIAGDIC VFTNGNHTIEVLDYLAK" misc_feature complement(118576..119088) /locus_tag="B565_0099" /note="Protease HslV and the ATPase/chaperone HslU are part of an ATP-dependent proteolytic system that is the prokaryotic homolog of the proteasome. HslV is a dimer of hexamers (a dodecamer) that forms a central proteolytic chamber with active sites on the...; Region: protease_HslV; cd01913" /db_xref="CDD:48442" misc_feature complement(order(118717..118719,118990..118992, 119032..119034,119038..119040,119086..119088)) /locus_tag="B565_0099" /note="active site" /db_xref="CDD:48442" misc_feature complement(order(118609..118611,118615..118620, 118627..118629,118639..118641,118672..118674, 118696..118698,118705..118710,118747..118749, 118759..118761,118840..118842,119011..119019)) /locus_tag="B565_0099" /note="HslU subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:48442" gene complement(119279..120124) /locus_tag="B565_0100" /db_xref="GeneID:10486017" CDS complement(119279..120124) /locus_tag="B565_0100" /codon_start=1 /transl_table=11 /product="cell division protein" /protein_id="YP_004390752.1" /db_xref="GI:330827800" /db_xref="GeneID:10486017" /translation="MATRDYVGSRPRRRAGGRNTKKAAPRRFPVIPVLLVVALLAGFG GFLYMINGKGNDAPTIEEQVKANKPKAQNNGLPQEKWSYIERLENKQVDIIEPPTQPG VLPPPPADTMTLQPEKLPQPVPTDIPQPGTPIGQPKPYQPNPATTPSTSGAPVASAQE QVIDRKAERERMEREIRAELERERAEAAKAKAATPPAQTAAADSGRYMMQCAALRSQD SAESLKARIAFTAGLSSSLQVINGANGTVYKVMVGPFNGKAAADAANSKLQSSGISGC IPKKG" misc_feature complement(119291..119944) /locus_tag="B565_0100" /note="cell division protein FtsN; Provisional; Region: PRK12757" /db_xref="CDD:183727" misc_feature complement(119294..119518) /locus_tag="B565_0100" /note="Sporulation related domain; Region: SPOR; cl10051" /db_xref="CDD:186898" gene complement(120128..121873) /locus_tag="B565_0101" /db_xref="GeneID:10486018" CDS complement(120128..121873) /locus_tag="B565_0101" /codon_start=1 /transl_table=11 /product="arginyl-tRNA synthetase" /protein_id="YP_004390753.1" /db_xref="GI:330827801" /db_xref="GeneID:10486018" /translation="MKEHIHHLLEQTVANLKSAGVLPADLEARVQVDRCKEKAHGDLA TNLAMLLAKPARKNPRELAAAIIEHLPASDLIAKVEIAGPGFINFFFDQRWLAGQVEA MVTSANANVRLPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVAARALEFLGHKVIRA NHIGDWGTQFGMLIAYLEKMSNEHASDMALKDLEAFYTQAKRCYDEDEAFAERARNYV VKLQGGDEYCRTMWKKLVDMTMEQNQINYDRLNVSLTNKDIMGESMYNDMLPEIVADL KAKGLAVESEGATVVFLDEFKNKDGEAMGVIIQKSDGGFLYTTTDIACAKYRYETLGA DRVMYFIDSRQHQHLMQAWTITRKAGYVPESVPLEHHAFGMMLGKDGRPYKTRSGGTV KLVDLLNEAEERAAALLESRNSDLSAEEKANVVNAIAMGAVKYADLSKNRTTDYIFDW DLMLSFEGNTAPYLQYAYTRIQSIFRKANIDAETLTGNVTLNEEAEEVLAQKLIQFSD AVNGVADKGMPHLLCTYLYELSGNFMTFYEACPINKDGVDEATRQSRLLLCAATAKVL KLGLGVLGIHTLERM" misc_feature complement(120131..121873) /locus_tag="B565_0101" /note="arginyl-tRNA synthetase; Reviewed; Region: argS; PRK01611" /db_xref="CDD:179308" misc_feature complement(121601..121867) /locus_tag="B565_0101" /note="Arginyl tRNA synthetase N terminal domain; Region: Arg_tRNA_synt_N; pfam03485" /db_xref="CDD:190660" misc_feature complement(120707..121522) /locus_tag="B565_0101" /note="catalytic core domain of arginyl-tRNA synthetases; Region: ArgRS_core; cd00671" /db_xref="CDD:185675" misc_feature complement(order(120830..120832,120839..120841, 120911..120913,120923..120925,121466..121468, 121475..121477,121493..121495,121499..121501, 121508..121510)) /locus_tag="B565_0101" /note="active site" /db_xref="CDD:185675" misc_feature complement(121466..121477) /locus_tag="B565_0101" /note="HIGH motif; other site" /db_xref="CDD:185675" misc_feature complement(120713..120724) /locus_tag="B565_0101" /note="KMSK motif region; other site" /db_xref="CDD:185675" misc_feature complement(120131..120595) /locus_tag="B565_0101" /note="Anticodon-binding domain of arginyl tRNA synthetases; Region: Anticodon_Ia_Arg; cd07956" /db_xref="CDD:153410" misc_feature complement(order(120197..120199,120263..120265, 120269..120271,120281..120283,120302..120304, 120329..120331,120443..120445,120452..120457, 120464..120469,120476..120478,120485..120487, 120497..120508)) /locus_tag="B565_0101" /note="tRNA binding surface [nucleotide binding]; other site" /db_xref="CDD:153410" misc_feature complement(order(120131..120136,120197..120199, 120245..120256,120263..120265,120443..120445, 120452..120457,120464..120469,120476..120478)) /locus_tag="B565_0101" /note="anticodon binding site; other site" /db_xref="CDD:153410" gene 122184..122750 /locus_tag="B565_0102" /db_xref="GeneID:10486019" CDS 122184..122750 /locus_tag="B565_0102" /codon_start=1 /transl_table=11 /product="ATP-dependent protease La (LON) domain-containing protein" /protein_id="YP_004390754.1" /db_xref="GI:330827802" /db_xref="GeneID:10486019" /translation="MRLALFPLSAHLLPGGVMPLRIFEPRYQRMIAEAGESGFALCMV DPRQPDALRNMLPIATRVTIIDFDRLPDGMLGITVQGMERVQIEDLWQEQDGLRIGEV TPLTAWPPRRLHPDQQPLVDALREVFADYPDYAALYPAPRWDDGNWVAQRWLEVLPIP PEQKQLLLAAADNQPAIALLKGVLVASH" misc_feature 122184..122723 /locus_tag="B565_0102" /note="Found in ATP-dependent protease La (LON); Region: LON; cl01056" /db_xref="CDD:141077" misc_feature 122187..122699 /locus_tag="B565_0102" /note="ATP-dependent protease La (LON) domain; Region: LON; pfam02190" /db_xref="CDD:190239" gene 122891..123460 /locus_tag="B565_0103" /db_xref="GeneID:10486020" CDS 122891..123460 /locus_tag="B565_0103" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma-70 factor, ECF subfamily" /protein_id="YP_004390755.1" /db_xref="GI:330827803" /db_xref="GeneID:10486020" /translation="MDNPDGDLKSLLIRVAEQADKAAFARLFQHFAPRIRSYGLRHLG SEANAMELVQETMLLVWQKARLYHPEKGAPTTWIYTVMRNQCFDMLRRRRASKEDLCA EELWPVLEFQAEEEHLSGGEDAVLTRQMAHYLGTLPEPQQQVVRGIYLQEFSQQELAE RLGVPLGTIKSRLRLALQKLKEQVEQGHD" misc_feature 122918..123445 /locus_tag="B565_0103" /note="RNA polymerase sigma factor; Provisional; Region: PRK11924" /db_xref="CDD:183384" misc_feature 122969..123175 /locus_tag="B565_0103" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature 123272..123433 /locus_tag="B565_0103" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cd06171" /db_xref="CDD:100119" misc_feature order(123302..123304,123332..123334,123350..123355, 123383..123385,123389..123394,123398..123406, 123410..123415,123419..123421) /locus_tag="B565_0103" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:100119" gene 123453..124148 /locus_tag="B565_0104" /db_xref="GeneID:10486021" CDS 123453..124148 /locus_tag="B565_0104" /codon_start=1 /transl_table=11 /product="ChrR family transcriptional regulator" /protein_id="YP_004390756.1" /db_xref="GI:330827804" /db_xref="GeneID:10486021" /translation="MIKAHPTDPMLRAFAADELPLPLAVGLSAHCELCPDCAARLKTF EEELAQQYLASPAEPELASRDEVGLDAGFDAMLADILAQPLAEPLSEPTHDQPRTQHG ELEVAGHAYRLPRVLARYRSPKWRHIGVIRQQSLPLDEMGARASLLHIEAGGRIPEHT HQGYELTLLLAGNIQDGDTLYKAGDFIWRDASHSHSPHTPDGCLCYTVQDAPVQFTKG LSRLLNGISQHLY" misc_feature 123456..124124 /locus_tag="B565_0104" /note="Transcriptional activator [Transcription]; Region: ChrR; COG3806" /db_xref="CDD:33600" misc_feature 123465..124124 /locus_tag="B565_0104" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene complement(124215..125030) /locus_tag="B565_0105" /db_xref="GeneID:10486022" CDS complement(124215..125030) /locus_tag="B565_0105" /codon_start=1 /transl_table=11 /product="Undecaprenyl-diphosphatase UppP" /protein_id="YP_004390757.1" /db_xref="GI:330827805" /db_xref="GeneID:10486022" /translation="MTDTYSLLVAFILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGPK AATFEVVIQLGSILAVVAVFWRRLFGLIGIHFGQKPSRDHATLSLVHVILGMMPAIVV GLAIHSWIKANLFGPQTVMYALVAGGILLIIAEKFRPAVTAETLDDISYKQAFGIGLF QCLALWPGFSRSGATISGGMLMGISRHAAAEFSFIMAVPMMVAASGLDLYKSRDFLSM ADFPMFAVGFITAFVVAMFAIKTFLTLIRRIDFIPFAIYRFIVAFAVYLVFVA" misc_feature complement(124218..125024) /locus_tag="B565_0105" /note="Bacitracin resistance protein BacA; Region: BacA; cl00858" /db_xref="CDD:186224" gene complement(125146..126135) /locus_tag="B565_0106" /db_xref="GeneID:10486023" CDS complement(125146..126135) /locus_tag="B565_0106" /codon_start=1 /transl_table=11 /product="galactose mutarotase" /protein_id="YP_004390758.1" /db_xref="GI:330827806" /db_xref="GeneID:10486023" /translation="MSSAMTPFELENEEGLRLRGLDFGATLTSLTLPVAGKRREVLLG CADDAYPTQQVWLGAVAGRFANRIGGAELVRDGQRWPLNANQAPNCLHGGQAGFHRQR WQIKELEADRVKLALLSRAGDQGFPGNLRVTLEYRLEQSDLVVDFVASTDATTPVSLT SHAYFNLDGQTDGGDVRDHLISINADHFLPTDPNGLPITITPVEGPFDLRRERLIGQD WLNHPQQQQAKGYDHAFVLNGPTSEWAARVVSGDRQLAMEVYTNQPSLQFYTGNWLAN TPNRSGLSHRDHDGFCLEAQQLPDSPNRPELGNPWLLPGGRYHHQTRYRFIRD" misc_feature complement(125158..126072) /locus_tag="B565_0106" /note="galactose mutarotase_like; Region: galactose_mutarotase_like; cd09019" /db_xref="CDD:185696" misc_feature complement(order(125254..125256,125329..125331, 125440..125442,125644..125646,125650..125652, 125860..125862,125935..125937,125968..125970)) /locus_tag="B565_0106" /note="active site" /db_xref="CDD:185696" misc_feature complement(order(125254..125256,125650..125652)) /locus_tag="B565_0106" /note="catalytic residues [active]" /db_xref="CDD:185696" gene complement(126132..127280) /locus_tag="B565_0107" /db_xref="GeneID:10486024" CDS complement(126132..127280) /locus_tag="B565_0107" /codon_start=1 /transl_table=11 /product="galactokinase" /protein_id="YP_004390759.1" /db_xref="GI:330827807" /db_xref="GeneID:10486024" /translation="MTPSQRVSTVFAEQFAKAPDLLVRAPGRVNLIGEHTDYNDGFVL PCAIDYETCVAIGLRDDRQVQVIAADYDNQRDQFDLDQPIEHHPNQRWSDYIRGVVKY LQERGYALRGLDLVVSGNVPQGAGLSSSASLEVAIGQAFKEALGLDISQAEIALNGQQ AENKFVGCNCGIMDQMISASGKTDHALLLDCRSLETRLITMPADLAVLIVNSNVRRGL VDSEYNTRRQQCEAAARHYGVKALRDLDLAGLEAGKAGLDEACYRRARHIVGENARTL AAADALASHDLTSLGELMAESHAAMRDDFEITVPAIDGLVEIIKARIGTDGGVRMTGG GFGGCVVALLRPEKVAEVIAAVEAEYPAISGLKADCYVCSASAGAGKL" misc_feature complement(126135..127280) /locus_tag="B565_0107" /note="galactokinase; Provisional; Region: PRK05101" /db_xref="CDD:179937" misc_feature complement(127104..127256) /locus_tag="B565_0107" /note="Galactokinase galactose-binding signature; Region: GalKase_gal_bdg; pfam10509" /db_xref="CDD:192609" misc_feature complement(126759..126941) /locus_tag="B565_0107" /note="GHMP kinases N terminal domain; Region: GHMP_kinases_N; cl08256" /db_xref="CDD:195670" gene complement(127277..128335) /locus_tag="B565_0108" /db_xref="GeneID:10486025" CDS complement(127277..128335) /locus_tag="B565_0108" /codon_start=1 /transl_table=11 /product="galactose-1-phosphate uridylyltransferase" /protein_id="YP_004390760.1" /db_xref="GI:330827808" /db_xref="GeneID:10486025" /translation="MFNPVDHPHRRFNPLTGQYVLVSPHRAKRPWQGQVEKVSQAPKQ AHDPDCFLCAGNTRVTGDINPDYKGTFVFTNDFAALMQDTPAANSASDPLLKLEAARG TSRVICFSPDHGKTLPELPLLAIEGVITTWRDQVAELSAQWEWVQVFENKGAVMGCSN PHPHGQIWGSDFLPNEIAREEQHQRDWLAEHGRPMLLEYVERELADRSRIVVETEHWL AVVPFWAAWPFETLLLPKAHVPSMLNMTQAQQQDLAVALKELTSRYDNLFECSFPYSM GWHFAPPKSECPEAWQLHAHFYPPLLRSATVRKFMVGFEMLAETQRDLTPEQAAERLR ALSPVHYNQTSHTNEEAL" misc_feature complement(127304..128335) /locus_tag="B565_0108" /note="galactose-1-phosphate uridylyltransferase; Provisional; Region: PRK11720" /db_xref="CDD:183290" misc_feature complement(127328..128311) /locus_tag="B565_0108" /note="Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme...; Region: GalT; cd00608" /db_xref="CDD:29587" misc_feature complement(order(127394..127396,127406..127411, 127448..127450,127499..127501,127511..127513, 127655..127657,127664..127669,127709..127711, 127730..127732,127775..127777,127808..127816, 127820..127822,127826..127828,127832..127834, 127856..127861,127865..127876,127883..127885, 128099..128101,128183..128185,128237..128245, 128249..128251,128258..128260,128267..128269, 128279..128284,128294..128296,128300..128311)) /locus_tag="B565_0108" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29587" misc_feature complement(order(127838..127840,127859..127861, 127865..127867,127883..127885,128108..128113)) /locus_tag="B565_0108" /note="active site" /db_xref="CDD:29587" gene complement(128396..129409) /locus_tag="B565_0109" /db_xref="GeneID:10486026" CDS complement(128396..129409) /locus_tag="B565_0109" /codon_start=1 /transl_table=11 /product="UDP-glucose 4-epimerase" /protein_id="YP_004390761.1" /db_xref="GI:330827809" /db_xref="GeneID:10486026" /translation="MKVLVTGGCGYIGSHTSLALQAAGMNPVVVDNLGNSKRSVLARV AAISGQQPLFYQGDIRDAALLDRIFAEQNIDAVIHFAALKAVGESTRIPLDYYENNLG GTLTLLQAMKRANVHNLVFSSSATVYGDPASLPIREDFPRSATNPYGRSKLIIEEILE DLQLAEPHWSMTLLRYFNPVGAHESGTMGEDPQGIPNNLMPYITQVAIGRRDCLSVFG NDYPTPDGTGVRDYIHVMDLAEGHVKALQHCASKGGVHTYNLGTGQGQSVLQLVAAFS AACGKPLPFRIEPRRPGDIAACWADPAKAERELGWRATRNIDAMCADSWRWQSANPNG YEE" misc_feature complement(128423..129406) /locus_tag="B565_0109" /note="UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs; Region: UDP_G4E_1_SDR_e; cd05247" /db_xref="CDD:187558" misc_feature complement(128402..129403) /locus_tag="B565_0109" /note="UDP-glucose 4-epimerase; Region: PLN02240" /db_xref="CDD:177883" misc_feature complement(order(128873..128875,128879..128884, 128954..128956,128966..128968,129038..129046, 129113..129115,129158..129160,129164..129172, 129233..129241,129302..129319,129374..129385, 129389..129391)) /locus_tag="B565_0109" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:187558" misc_feature complement(order(128924..128932,128936..128941, 128948..128950,128960..128962,128969..128971, 129074..129076,129083..129088,129092..129097, 129104..129109,129116..129121,129128..129136, 129140..129142)) /locus_tag="B565_0109" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187558" misc_feature complement(order(128954..128956,128966..128968, 129038..129040,129110..129112)) /locus_tag="B565_0109" /note="active site" /db_xref="CDD:187558" misc_feature complement(order(128528..128530,128537..128539, 128606..128608,128714..128716,128720..128722, 128726..128728,128759..128770,128813..128821, 128876..128884,128966..128968,129032..129040)) /locus_tag="B565_0109" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187558" gene 129584..130618 /locus_tag="B565_0110" /db_xref="GeneID:10486027" CDS 129584..130618 /locus_tag="B565_0110" /codon_start=1 /transl_table=11 /product="transcriptional regulator GalR" /protein_id="YP_004390762.1" /db_xref="GI:330827810" /db_xref="GeneID:10486027" /translation="MHSERSENSMSTIKDVARLANVSVATVSRVMNNSPKASAASREV VQKAMAELGYTPNANARALVSQTCDTMGVVVGDVADPFFGALVKGVSGIAVEQNLHLL MGNGFHKARQEREAIELLIGKRCEALVVHSKALSDEELYDYAMRVPGMVLINRDIPAL KGRCIALNNRLGAATATRHLIELGHRHIAFISSDHAIEDATLRLQGYQDGLMEAGLAA DPELIESGTPNEEGGERAMLNLLAKGLKVTAVVAYNDAMAAGAISVLADNGLRVPEEV SVVGFDDIIYARYLRPKLSTMRYPIELMAAQAAKLAIQLAAGESDATQSRIYTPTLIN RHSVAPVRAG" misc_feature 129611..130603 /locus_tag="B565_0110" /note="DNA-binding transcriptional regulator GalR; Provisional; Region: PRK10727" /db_xref="CDD:182681" misc_feature 129623..129778 /locus_tag="B565_0110" /note="Helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators; Region: HTH_LacI; cd01392" /db_xref="CDD:143331" misc_feature order(129623..129625,129647..129661,129665..129670, 129677..129679,129692..129697,129704..129706, 129743..129745,129752..129754,129761..129766, 129770..129775) /locus_tag="B565_0110" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature 129743..129772 /locus_tag="B565_0110" /note="domain linker motif; other site" /db_xref="CDD:143331" misc_feature 129791..130594 /locus_tag="B565_0110" /note="Ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism; Region: PBP1_GalS_like; cd06270" /db_xref="CDD:107265" misc_feature order(129791..129793,129812..129814,129830..129832, 129845..129847,129854..129856,129881..129892, 129896..129898,129938..129940,129950..129952, 130271..130276,130370..130372,130448..130453) /locus_tag="B565_0110" /note="dimerization interface (closed form) [polypeptide binding]; other site" /db_xref="CDD:107265" misc_feature order(129827..129829,129974..129976,130190..130192, 130265..130267,130343..130345,130427..130429) /locus_tag="B565_0110" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:107265" gene 130808..133867 /locus_tag="B565_0111" /db_xref="GeneID:10486028" CDS 130808..133867 /locus_tag="B565_0111" /codon_start=1 /transl_table=11 /product="glycoside hydrolase family 2 TIM barrel" /protein_id="YP_004390763.1" /db_xref="GI:330827811" /db_xref="GeneID:10486028" /translation="MLREIVARQDWQTQAITSVNRLAAHTPMFSWRSEADARGDLAST SRLLLDGEWRFSFFAAPERVPESWLARDLVDACPITVPGNWQLDAAYPAARPLTDGPI YTNIKYPFPCDPPRVPAENPTGCYSREFELPADWLASGQSRIIFDGVSSAFHLFCNGR WVGYSQDSRLPAEFDLTPYLQSGRNRLAVLVLRWSDGSYLEDQDMWWLSGIFRSVSLL HKPARHLMDMRVTPELDACYRDGRLKIALQVANGAGLSVEANLYDGSERVATLLQPIG TQAIDEKGAYDDRAEFWLDVAAPRKWSAETPHLYRFTLTLLDEQGLAIESEACDVGFR VVEIRGGLLRVNGQPLLVRGANRHEHHPAKGYAIDRATMERDLLLMKRHNFNAVRCSH YPNHPDFYRLCDRLGLYVVDEANLETHGMTPMGRLARDPAWSNAFLERATRMVARDFN HPSIIIWSLGNESGYGPAHDAMYGWIKRSDPSRPVQYEGGGADTPATDIICPMYARTH QDQPFPAVPKWALAKWIGLPGEHRPLILCEYAHAMGNSLGGYAHYWQAFRDHPRLQGG FVWDWVDQGLDKYTADGRHYWGYGGDFGDVQNDRQFCCNGLLFPDRTPHPTLFEAKRA QQPFRFSLLEHTPLRVRIESEYLFRETDNERLCWQLCENGHVQQQGEFSLELAPQGVV ELTLSEALPPFAAGSLAWLDLAIVQPQATPWSQADHKVARQQFTLPTPLALPAPVAAA TLSEQPDGWRITAANSQWRLDKQSGRITSWQKSGQEQLLAPIMDHFYRAPLDNDIGTS EADHADPNSWIARWQGCGLGQWQHRCLGIAVAGGDIRVSHGYFHRDELLLVSHWHHHF TDDGAMSLEIETELAQVLPSLPRIGLLLHLAKVPARAEWLGRGPHENYPDRLLGADLG RWSLPLEAMHTPYIFPSDNGLRCDTRQLQLGSTTVSGSFHFSASRFSQQQLAAARHQS DLVAEEGLWVCLDGAHMGVGGDDSWSQSVRPEYQLLERRYRWGCTLR" misc_feature 130808..133864 /locus_tag="B565_0111" /note="beta-D-galactosidase; Reviewed; Region: lacZ; PRK09525" /db_xref="CDD:181928" misc_feature 130934..131470 /locus_tag="B565_0111" /note="Glycosyl hydrolases family 2, sugar binding domain; Region: Glyco_hydro_2_N; pfam02837" /db_xref="CDD:145805" misc_feature 131477..131809 /locus_tag="B565_0111" /note="domain; Region: Glyco_hydro_2; pfam00703" /db_xref="CDD:189679" misc_feature 131813..132697 /locus_tag="B565_0111" /note="Glycosyl hydrolases family 2, TIM barrel domain; Region: Glyco_hydro_2_C; cl14895" /db_xref="CDD:196856" misc_feature 133058..133864 /locus_tag="B565_0111" /note="Beta galactosidase small chain; Region: Bgal_small_N; pfam02929" /db_xref="CDD:111779" gene 134144..135130 /locus_tag="B565_0112" /db_xref="GeneID:10486029" CDS 134144..135130 /locus_tag="B565_0112" /codon_start=1 /transl_table=11 /product="galactose ABC transporter periplasmic binding protein" /protein_id="YP_004390764.1" /db_xref="GI:330827812" /db_xref="GeneID:10486029" /translation="MKKLTTVAALLMGMMAGANAQADTRIGVTVYKYDDNFMAVVRKA IEKEAAATPGVELLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAPVVIEKAR GEDIPVVFYNKEPSATDLASYDKAYYVGTDSKESGIIQGQLIAKHWKAHPEWDLNKDG VIQFVLLKGEPGHPDAEARTSYVVKTLNDGGVKTEQLHMDTGMWDTAMAKDKMDAWIS GPNANKIEVVIANNDGMAMGAVESLKAQGKTAIPVFGVDALPEALAMVKSGAMAGTVL NDAANQAKATFELTKNLAEGKPAGEGTKWNIVDKVVRVAYVGVDKDNLSQFE" misc_feature 134216..135100 /locus_tag="B565_0112" /note="Periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species; Region: PBP1_GGBP; cd01539" /db_xref="CDD:107252" misc_feature order(134252..134257,134402..134404,134477..134482, 134666..134668,134678..134680,134753..134755, 134837..134839,134912..134914,134972..134974) /locus_tag="B565_0112" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:107252" misc_feature order(134606..134608,134612..134614,134618..134620, 134624..134626,134630..134632,134819..134821) /locus_tag="B565_0112" /note="calcium binding site [ion binding]; other site" /db_xref="CDD:107252" gene 135316..136704 /locus_tag="B565_0113" /db_xref="GeneID:10486030" CDS 135316..136704 /locus_tag="B565_0113" /codon_start=1 /transl_table=11 /product="galactoside ABC transporter ATPase component mglA" /protein_id="YP_004390765.1" /db_xref="GI:330827813" /db_xref="GeneID:10486030" /translation="MGENGAGKSTLLKCLFGIYEKDQGKIFFKGQEINFTSSKEALEN GVSMVHQELNLVLQRTVMDNMWLGRYPTKGWFIDHGKMYDDTKRIFDELDIDIDPKVK VATLSVSQMQMIEIAKAFSYDAKIVIMDEPTSSLTEKEVNHLFKIINKLKEKGCGIVY ISHKMEEIFQLCDEITILRDGQWVATQPLKGMTMDQIIGMMVGRELTQRFPEKTNQPK EVILEIEHLTAKNQPSIQDVSFNLHKGEILGIAGLVGAKRTDIVETLFGIRDRSQGSI KLHGKEVANHNAHEAIRNGFALVTEERRSTGIYSRLDIAFNSLIANMDSYKGSMGLLS DNKMKSDTQWVIDSMRVKTPTQQTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRG IDVGAKFEIYQLILELAKKDKGIIIISSEMPELLGITDRIMVMSNGRVAGIVNTKETD QSEILRLASLYL" misc_feature 135316..136701 /locus_tag="B565_0113" /note="galactose/methyl galaxtoside transporter ATP-binding protein; Provisional; Region: PRK10982" /db_xref="CDD:182880" misc_feature 135316..135873 /locus_tag="B565_0113" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 135319..135342 /locus_tag="B565_0113" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(135328..135333,135337..135345,135466..135468, 135703..135708,135802..135804) /locus_tag="B565_0113" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 135457..135468 /locus_tag="B565_0113" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 135631..135660 /locus_tag="B565_0113" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 135691..135708 /locus_tag="B565_0113" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 135715..135726 /locus_tag="B565_0113" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 135790..135810 /locus_tag="B565_0113" /note="H-loop/switch region; other site" /db_xref="CDD:72971" misc_feature 135970..136635 /locus_tag="B565_0113" /note="This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (; Region: ABC_Carb_Monos_II; cd03215" /db_xref="CDD:72974" gene 136721..137731 /locus_tag="B565_0114" /db_xref="GeneID:10486031" CDS 136721..137731 /locus_tag="B565_0114" /codon_start=1 /transl_table=11 /product="galactoside ABC transporter permease MglC" /protein_id="YP_004390766.1" /db_xref="GI:330827814" /db_xref="GeneID:10486031" /translation="MESAKNFNLMQALKENAIYLVLLVLLMVIVIQEPSFLSLTNFSN ILTQSSVRVIIALGVAGIIITQGTDLSAGRQVGLAALIAATMLQALTNVNKVFPTLGE VPIPAVILLVCVVGALIGLVNGLIVAYLNVTPFITTLGTMIIVYGINSLYFDSVGASP VAGFDPRFSSFAQGFIRIGGFKLSYLTFYAAIASVFVWVLWNKTRFGKNIFAIGGNPE AAKVSGVNVAVNLVMIYALAGVFYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGG VSFAGGVGTVAGVITGVLIFTLINYGLTYIGVSPYWQFIIKGGIIILAVALDSMKYAK KK" misc_feature 136913..137704 /locus_tag="B565_0114" /note="Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the TM of a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of the monosaccharide arabinose. This group...; Region: TM_PBP1_transp_AraH_like; cd06579" /db_xref="CDD:119321" misc_feature 137372..137428 /locus_tag="B565_0114" /note="TM-ABC transporter signature motif; other site" /db_xref="CDD:119321" gene 137783..139516 /locus_tag="B565_0115" /db_xref="GeneID:10486032" CDS 137783..139516 /locus_tag="B565_0115" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004390767.1" /db_xref="GI:330827815" /db_xref="GeneID:10486032" /translation="MPFKVKIYLLLLLAILVTIGTAGLSVNHFISGYIRTQATHNINE QITLVKEKLASDINQKILLAANLNFGVTNVKKTLQETGFHNIVKVIGDMAFDVSGVIN DTAKVDALRKLIPAANNQITVSPLQQVDGKPIITILVPRGADSAYLYYLDMSEFKSLL EKMSGDGRYFSLADSQGNSLYDSKPQGESEARPNQLDIRGSSWTLTGYIDLDYIRAMT RALNGQIIMALCGVAIVVMVLAMLALNVAYRPILSLRDLVLELSRGSGDLTRRLAVTS KDDLGQISAGINRFIERLQEMMGEVRQASGQLNSGIEGLASQTGAAQSLLADHVRETE QVVTAINEMSRTAVSVSESAASTAQLTGQSQQLASQSRQVVDQAMASVMALVDEVEAT ARSIEAMQQDVQQIGSVLGVIGSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRS LAARTQQSTAEIQTMLASLQRGTRTVVEAMGNTKQSCQGAAENTTRVNESLDLMAGEV VEINDLISHIATAAEQQSAVAEEINRNMSAIAEVIRQLTHNGEATVASSAAMQQTYDR LREIVGHFRLE" misc_feature 138527..138679 /locus_tag="B565_0115" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 138725..139507 /locus_tag="B565_0115" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 138869..139513 /locus_tag="B565_0115" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(139584..140717) /locus_tag="B565_0116" /db_xref="GeneID:10486033" CDS complement(139584..140717) /locus_tag="B565_0116" /codon_start=1 /transl_table=11 /product="tRNA (uracil-5-)-methyltransferase" /protein_id="YP_004390768.1" /db_xref="GI:330827816" /db_xref="GeneID:10486033" /translation="MTQSQQPSANAPAPRTAADYQAQLDEKRARLTELFAGFTLPALE VHSSPAEYYRMRAEFRIWHEGDDLFHCMYAPATKEIIKIDHFPTASRLINQLMPLLLE GLRPHPVLRRKLFQIDYLSTQSGQIIVSLLYHRKLEAEWQQAAEALQADLRAKGFELQ LIGRAHKQKICLGDDFVIEQLNVAGRQLIYKQVENSFTQPNATINEQMLAWALDVTKG SEGDLLELYCGNGNFSIALAQNFRKVLATEIAKPSVDSAQFNIAANGVDNLIILRMSA EEFTMAMRGEREFNRLKGVDLKSYQCNTIFVDPPRAGLDDATVKLVQEYDNILYISCN PETLQANMAVLGETHEIARFALFDQFPWTHHMEAGVYLRRKAG" misc_feature complement(139593..140666) /locus_tag="B565_0116" /note="tRNA (uracil-5-)-methyltransferase; Validated; Region: PRK05031" /db_xref="CDD:179917" misc_feature complement(139596..>140132) /locus_tag="B565_0116" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene complement(140714..140884) /locus_tag="B565_0117" /db_xref="GeneID:10486034" CDS complement(140714..140884) /locus_tag="B565_0117" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390769.1" /db_xref="GI:330827817" /db_xref="GeneID:10486034" /translation="MSSHHACRSAIGLTEHFLTTKCWTICGWLLKSGPFGWPVAFPRF RPGPAGVHVRYL" gene 140888..142030 /locus_tag="B565_0118" /db_xref="GeneID:10486035" CDS 140888..142030 /locus_tag="B565_0118" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390770.1" /db_xref="GI:330827818" /db_xref="GeneID:10486035" /translation="MQIEGVGAAQPKGVGVSPKSPQPAEQKQVKSEEAVSLHKPPKWA QVLIQQALQFSLEINGQGYQAPKVKEPEEITPETLFDFQSVADNVLQFVTGRLGAARA DGKSDDDLTGMMEQARKGVDKGFDEAKKQLGKWATDNDDIKTGIDQSYKLIQKGLEEF EKEFFGKVSPTDMGQAEMASRQQGYLEIQTKDGDKVVLRFNDSWQTKSQTSESGSQFS LKSSQSFSFSLEGDLSSDEMESIGKLVKGIDELAGSFFPGNFEDLLDKAGELKLDDSQ LASYSLKLKQSVKLSQTYQGAHSLQDLIKPFADYLPKLDQVQKQADSLLPPSQQQALT PAVLAARGEEEPAQVDRFTSFNQRMLEALRMINQFQPSTEPASKNA" gene 142120..142653 /locus_tag="B565_0119" /db_xref="GeneID:10486036" CDS 142120..142653 /locus_tag="B565_0119" /codon_start=1 /transl_table=11 /product="adenosyltransferase" /protein_id="YP_004390771.1" /db_xref="GI:330827819" /db_xref="GeneID:10486036" /translation="MNPKKPRDKRELCYPFIFETSFKCDFEIATDELCCQVGAVLSHL APDADTEPMLADLAALQRLIYNLNGSVRGKLGIFDADLEWLKARYDHYNEASRGSVTG FVLPQGPQPIPTLHLCRCGSKKVVRLLVRLEESGVAFDPILYRFANLLANFFFVLTVY LKQRWQVLEVPYVSINY" misc_feature 142189..142602 /locus_tag="B565_0119" /note="Cobalamin adenosyltransferase; Region: Cob_adeno_trans; cl00920" /db_xref="CDD:193973" gene complement(142754..144583) /locus_tag="B565_0120" /db_xref="GeneID:10486037" CDS complement(142754..144583) /locus_tag="B565_0120" /codon_start=1 /transl_table=11 /product="maltodextrin glucosidase" /protein_id="YP_004390772.1" /db_xref="GI:330827820" /db_xref="GeneID:10486037" /translation="MTHPFLFHPQVAPWFKESADALQLTLFSELDAPIREVWLRHEPD NEEYLIPMTAVSTRDRLQVWQATLPLIKGQDIHLYSFKCLTDEEQWWLHGAGVSASMP PREQHFRFNSLHQPPAWVQDQVFYQIFPDRFCNGDPSLSVKHHEYEYRGKAVISKAWG EPVSRHEEGHGACEFYGGDLAGIDAKLHYLQSLGVTALYLNPIFDSPSNHKYDTQDYF KVDAHLGSNEQFAELTRNLHQRGMKIILDAVVNHTSTEHPWFCPPLGAQSNPDSPWRS FYTFDKEGDYVSWKGIRSLPKLDFSCEKVQDAVYRADDAILRYWMRAPYQIDGWRFDV IHMLGERGTAEGNRSHVRAIRGAVKQENPDAYVLGEHFFEASQWLQGDQEDGAMNYYG FAHPIRAFLAGKDIAYHPIKISAEELDRWLKLARAHIPFKNQLAQFNLLDSHDTARFL HLLGEDKQRMQLAATLLLTYIGVPSIYYGDEVGLSGGNDPDCRRCFPWDTTDWDHVLH DHYRRLIQIRRQRPSLRRGDIQTLYAGPHSYVFARTLQSDQVVVACNRHPSEPRTISL PLWQTASPASRFTDAFNGEKFEVVQGEVQLTIPANSARVLISS" misc_feature complement(142784..144580) /locus_tag="B565_0120" /note="maltodextrin glucosidase; Provisional; Region: PRK10785" /db_xref="CDD:182728" misc_feature complement(144227..144568) /locus_tag="B565_0120" /note="CD and pullulan-degrading enzymes N-terminus domain. Members of this subgroup include: Cyclomaltodextrinase (CDase), maltogenic amylase, and neopullulanase all of which are capable of hydrolyzing all or two of the following three types of substrates:...; Region: CD_pullulan_degrading_enzymes_N_term; cd02857" /db_xref="CDD:30344" misc_feature complement(order(144251..144253,144350..144352, 144356..144358)) /locus_tag="B565_0120" /note="homodimer; other site" /db_xref="CDD:30344" misc_feature complement(143114..144052) /locus_tag="B565_0120" /note="Alpha amylase, catalytic domain; Region: Alpha-amylase; cl07893" /db_xref="CDD:164103" misc_feature complement(142766..142969) /locus_tag="B565_0120" /note="Alpha amylase, C-terminal all-beta domain; Region: Alpha-amylase_C; cl02706" /db_xref="CDD:194419" gene complement(144589..145419) /locus_tag="B565_0121" /db_xref="GeneID:10486038" CDS complement(144589..145419) /locus_tag="B565_0121" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390773.1" /db_xref="GI:330827821" /db_xref="GeneID:10486038" /translation="MSMDRLFDKIKQLPTIPKLLHELMQSFNDENARIDEIAAKIAMD QVISVKVLRMANSAALRRGNEVTSIEQAVIRLGFNRLRSVVVASGIIGTFKAPPSFDK NKFWTETFQVATIAKTLAQEAKVMDPETAFTCALIHNIGELLIQSTLPEEAELINMAI QNGSSRVEAQREMLGYDYAQLGAELARRWNLSEAFVDAISQQLDPLSHDPVSKEAVLI RLAVFISFAWNAGVPAQAIIARFPKPLADQLGLDPKSLAGQLETLHEQGNALADLLTQ " misc_feature complement(144805..145383) /locus_tag="B565_0121" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" misc_feature complement(<144619..>144912) /locus_tag="B565_0121" /note="aminopeptidase; Provisional; Region: PRK09795" /db_xref="CDD:182080" gene complement(145508..145927) /locus_tag="B565_0122" /db_xref="GeneID:10486039" CDS complement(145508..145927) /locus_tag="B565_0122" /codon_start=1 /transl_table=11 /product="Heat shock protein HslJ" /protein_id="YP_004390774.1" /db_xref="GI:330827822" /db_xref="GeneID:10486039" /translation="MPRLPFLLLIPLLLLAGCSSTAFVQQDLQHHHWVLSKLDGEPIK APRDNPPDFEIGEHFTVNGIAGCNRYFGQGHLEDDKLWVTSLGSTEMACMPPLDTIEQ AVLNTLIEGATLSGTSQNLILQGKQHRLEYTLRDWVF" misc_feature complement(145514..145882) /locus_tag="B565_0122" /note="META domain; Region: META; cl01245" /db_xref="CDD:194076" gene complement(146093..147454) /locus_tag="B565_0123" /db_xref="GeneID:10486040" CDS complement(146093..147454) /locus_tag="B565_0123" /codon_start=1 /transl_table=11 /product="Molecular chaperone" /protein_id="YP_004390775.1" /db_xref="GI:330827823" /db_xref="GeneID:10486040" /translation="MFIGFDYGTSNCAVAVMEQGSPRLLNLGASRYLPSTLHAPHRDA IVGLLAEGLAPAQQAEYLKLRGPVVTRAQMVRRQMREEGLIDELSFGGAALERYLEEP DDGYYIKSPKSFLGAYGLKAPQIALFEDIVCAMMLHVRQQAEQQLGAPIRQAVIGRPV NFQGLAGEESNQQAIAILTEAARLAGFEQVEFLYEPVAAGFEFEARLTEDAVVLVVDI GGGTTDCSMLRMGPSYRDQLDRSGDLLGHSGQRIGGNDFDIRLTVEGMMPLLGMHETL KTGKPLPHPLFWDAAAINDVSAQSRFYSLDTARQLQDLQLDSQPGSKLGRLASLRAHK LSHQLVWRAEQGKIALSEQELNRQSLAELEKGLEAELTREQLANASALLLEKIGELMD EAIAAAGVQPDRIFVTGGSARSPLIASFIRQKLPSIPLEGGDDFGSVAAGLARYAERL FAN" misc_feature complement(146099..147454) /locus_tag="B565_0123" /note="putative chaperone; Provisional; Region: PRK11678" /db_xref="CDD:183274" gene complement(147547..148536) /locus_tag="B565_0124" /db_xref="GeneID:10486041" CDS complement(147547..148536) /locus_tag="B565_0124" /codon_start=1 /transl_table=11 /product="D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein" /protein_id="YP_004390776.1" /db_xref="GI:330827824" /db_xref="GeneID:10486041" /translation="MKVAVFSTKSYDKEHFNQANSQYGFDLEFFDVRLEAKTARLAHG FPVVCLFVNDDADREVLTELAANGTQVIALRCAGYNNVDLAAAKELGLKVVRVPAYSP EATAEHAVGMMMCLNRRIHKAYQRTRDANFSLEGLVGFNMHGKTVGVIGTGKIGLAAL RILKGFGVRLLVNDPYQNPAAIELGAEYVDLDTLFRQSDIISLHCPLFKENYHLLNKE AFAKMKDGVMIINTSRGGLLDSNAAIEALKTSRIGALGLDVYEEEEDLFFSDKSNEVI TDDVFRRLSACHNVLFTGHQAFLTREALHAIADTTLGNIRAIESQGRCDNEVE" misc_feature complement(147553..148536) /locus_tag="B565_0124" /note="Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]; Region: LdhA; COG1052" /db_xref="CDD:31252" misc_feature complement(147748..148209) /locus_tag="B565_0124" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene complement(148611..149105) /locus_tag="B565_0125" /db_xref="GeneID:10486042" CDS complement(148611..149105) /locus_tag="B565_0125" /codon_start=1 /transl_table=11 /product="CreA family protein" /protein_id="YP_004390777.1" /db_xref="GI:330827825" /db_xref="GeneID:10486042" /translation="MTHNHTRHNALRRALPLLLGALFAGPALADKADPVGEVSTAFKL FGPNHKILVEAFDDPRIDGVACYLARPKTGGVKGGLGLAEDPSHASLSCHQIGPITLP EKLKAGEEVFDVSTSLVFKEQKVVRFYDKKRNALVYLTYSTKLVDGSYKSAVSAVPIM PWGQ" misc_feature complement(148614..149015) /locus_tag="B565_0125" /note="CreA protein; Region: CreA; cl01154" /db_xref="CDD:186361" gene complement(149132..149578) /locus_tag="B565_0126" /db_xref="GeneID:10486043" CDS complement(149132..149578) /locus_tag="B565_0126" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390778.1" /db_xref="GI:330827826" /db_xref="GeneID:10486043" /translation="MKGIQEWFEEYGQSHCHPVNVAIHKLAVPGIYLCSLALLWCLPH GPLPEPLNWAAVAAIPVLLFYLQLSFSLFAGMAGLTALGLAFCHQWQGPLLWPAVAAF VLLWIAQFVGHKIEGKRPSFLADLQFLLIGTAWVLASLYRRLGIPY" misc_feature complement(149147..149578) /locus_tag="B565_0126" /note="Protein of unknown function (DUF962); Region: DUF962; cl01879" /db_xref="CDD:194204" gene complement(149641..150498) /locus_tag="B565_0127" /db_xref="GeneID:10486044" CDS complement(149641..150498) /locus_tag="B565_0127" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390779.1" /db_xref="GI:330827827" /db_xref="GeneID:10486044" /translation="MKWLIKLCLCLPLLAQAQVLTVKVPSRPVNNLDQEYQYKLLELA LTRSGQPFRIQPVELDLNQFTLQQQLSKGKTINVFWMGTSSALESSLIAVPIPLFRGL EGLRLSFIHADAQEKFNQINTLADLKQLKAAQGVGWADNKILENAGIPTLSGRYSSLF RLINDGDKIDFFPRALVEIFAERSELVAQYSNLAIEQHLLIRYPFAQFFFVSPEYPKL AKAIQTGLERAYADGSFMKFFNDNPKIREALASANLDQRVTIALPNPDMTPLLKSIPA QYWEYPPQG" misc_feature complement(149794..>150174) /locus_tag="B565_0127" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" gene complement(150646..151032) /locus_tag="B565_0128" /db_xref="GeneID:10486045" CDS complement(150646..151032) /locus_tag="B565_0128" /codon_start=1 /transl_table=11 /product="DnaK suppressor protein" /protein_id="YP_004390780.1" /db_xref="GI:330827828" /db_xref="GeneID:10486045" /translation="MCDFMTEDQLAFYKGQIERQIVELEERLNSQASQAIATDTNEMA DEIDRASIEEARRLELNRIEHDKLHLRKLRGALKRISEGDFGYCESCGDEISLKRLHA RPESRFCVECQSTKEFNDTHVFRRVA" misc_feature complement(150691..151020) /locus_tag="B565_0128" /note="Prokaryotic dksA/traR C4-type zinc finger; Region: zf-dskA_traR; cl00755" /db_xref="CDD:193930" gene 151513..152844 /locus_tag="B565_0129" /db_xref="GeneID:10486046" CDS 151513..152844 /locus_tag="B565_0129" /codon_start=1 /transl_table=11 /product="glutamine synthetase" /protein_id="YP_004390781.1" /db_xref="GI:330827829" /db_xref="GeneID:10486046" /translation="MDSIKGWMESNRITEVECLFPDFTGNARGKIIPANKFLREGGMR LPEVIFTQTVTGEYPDDDSMIDPLERDMQLYPDPNTIRFVPWALEPTAQVIHDCFDVN GKLIDIAPRSVLRRVLSFYEKQGWKPVVAPELEFYLVTRNEDPDYPLVPPVGRNGRPE TARQSFSIDAVNEFDPIFEDMYDYCEAQELEVDTLIHESGAAQMEINFLHGDAIDLAD QVFLFKRTMREAAHRHGIYATFMAKPMSDEPGSAMHIHQSLEDVNGHNLFGTPNGGNS EQFMHFIAGLQKYTPAVTALLAPNVNSYRRLTFGESAPRNVQWGVENRTCGLRVPFSD PSARRVENRFAGADANPYLALAATLACGYLGMMEKLEPLPEMKSSAYDLPYSLPRSLE EALSHLEQCEPIKEMLGERFTRAFVAVKRKEYETYFGVISRWEREFLLLNV" misc_feature 151516..152838 /locus_tag="B565_0129" /note="Glutamine synthetase [Amino acid transport and metabolism]; Region: GlnA; COG0174" /db_xref="CDD:30523" misc_feature 151840..152598 /locus_tag="B565_0129" /note="Glutamine synthetase, catalytic domain; Region: Gln-synt_C; pfam00120" /db_xref="CDD:189401" gene 153122..154483 /locus_tag="B565_0130" /db_xref="GeneID:10486047" CDS 153122..154483 /locus_tag="B565_0130" /codon_start=1 /transl_table=11 /product="class III aminotransferase" /protein_id="YP_004390782.1" /db_xref="GI:330827830" /db_xref="GeneID:10486047" /translation="MQQTTREWQQLDASHHLHPFTDFQALNKKGSRIITKASGVYLED SEGKRILDGMAGLWCVNMGYGRQELVDAATRQMQQLPYYNLFFQTAHPPVIELATLLA EVTPAHLNHVFFTGSGSECNDTVLRMVRHYWASKGLPDKQVIISRHNAYHGSTVAGAS LGGMKGMHAQGGLPIPGIVHIDQPYHFGEGQGMSAHEFGLERARQLEQKILELGVDKV AAFIGEPIQGAGGVIIPPDSYWPEIQRICDHYGILLIADEVICGFGRTGHWFASEGFG IKPDLMCLAKGITSGYLPLGAVMVSDRVAKGLVEEGGEFNHGFTYSGHPVSCAVAVAN IQLMQKESIVKRVHDTIGPYLQRRWAELADHPLVGETRGKGLVAALEIVEDKQTNRRF PAQANAGMTCREFCFNNGLVMRAVGDTMIISPPLVITEEQVDELVDLARRSLDLTAAK LKG" misc_feature 153122..154480 /locus_tag="B565_0130" /note="putative aminotransferase; Validated; Region: PRK07480" /db_xref="CDD:180994" misc_feature 153143..154453 /locus_tag="B565_0130" /note="Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase...; Region: OAT_like; cd00610" /db_xref="CDD:99735" misc_feature order(153470..153478,153572..153577,153581..153583, 153791..153793,153890..153892,153896..153901, 153977..153979) /locus_tag="B565_0130" /note="inhibitor-cofactor binding pocket; inhibition site" /db_xref="CDD:99735" misc_feature order(153473..153478,153572..153577,153791..153793, 153890..153892,153899..153901,153977..153979) /locus_tag="B565_0130" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 153977..153979 /locus_tag="B565_0130" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 154534..155634 /locus_tag="B565_0131" /db_xref="GeneID:10486048" CDS 154534..155634 /locus_tag="B565_0131" /codon_start=1 /transl_table=11 /product="putrescine ABC transporter periplasmic binding protein" /protein_id="YP_004390783.1" /db_xref="GI:330827831" /db_xref="GeneID:10486048" /translation="MMSFKTGVIAASVALVMASAGAMAEEKVLHVYNWSDYIAPDTLD NFQKETGIKVVYDVFDSNEVLEAKLLAGSSGYDIVVPSNPFLAKQIKAGVFQKLDKSK LSNWQNMDVDLLKALEPSDPGNQYSIPYLWGTIGYAYNAEKVKAVLGADAPVNSWDLV FKPENMAKLKECGVSFLDSPTEMLPAALQYLGFKPDSQKPAELKKAEELFLSIRPYTA YFHSSKYISDLANGNLCVAVGYSGDLQQSKARAAEAKNGVALTYTIPKEGAGSFFDMI AIPADAKNVEAAHTFINYLMKPEVIANITNVVQFPNGNKAATPLVDEAIRTDPGIYPD AATLQKIYTFPDLPAKVQRLMTRSWTKIKSGK" misc_feature 154534..155631 /locus_tag="B565_0131" /note="Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]; Region: PotD; COG0687" /db_xref="CDD:31031" misc_feature 154549..155631 /locus_tag="B565_0131" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene 155754..156839 /locus_tag="B565_0132" /db_xref="GeneID:10486049" CDS 155754..156839 /locus_tag="B565_0132" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein" /protein_id="YP_004390784.1" /db_xref="GI:330827832" /db_xref="GeneID:10486049" /translation="MNTTRLLTIALTMGLANVAQAAPVLHFYNWSDYIGETTLSDFQQ ATGIKTVYDVFDSNETLEGKLLTGRTGYDLVVPSNNFLAKQIKAGAFQKLDKSLLPNL ANLDPVLLKQLDKVDPGHQYAVPYLWGTNGIGYNVDKIKAVLGVDKIDSWATIFEPEN MAKLSRCGVAFLDSADEMIPAALNYLGLDPNSHATGDIKQAEALLLKVRPYVAYFHSS KYIGDLANGDICVAAGFSGDILQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPSD ATNVKEAHALINYVLQPEVIAKVSDYVGYANPNSRAGEFMDEAVRNNEEVYPPQAVLE RLYVQEAHPRSVQRLITRSWTKIKSGT" misc_feature 155769..156836 /locus_tag="B565_0132" /note="Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]; Region: PotD; COG0687" /db_xref="CDD:31031" misc_feature 155772..156833 /locus_tag="B565_0132" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene 156918..158072 /locus_tag="B565_0133" /db_xref="GeneID:10486050" CDS 156918..158072 /locus_tag="B565_0133" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter ATPase" /protein_id="YP_004390785.1" /db_xref="GI:330827833" /db_xref="GeneID:10486050" /translation="MAIASSAYKKALEGSQQRKEVLVKIDRVSKQFDETLAVDNVSLN IHKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRLFLDGVDITDMPPYERPINMMFQS YALFPHMTVAQNIAFGLKQDGLPKAEIDARVEEMLKLVQMTQYARRKPHQLSGGQRQR VALARSLAKRPKLLLLDEPMGALDKKLRSKMQLELVEIIERVGVTCVMVTHDQEEAMT MAERIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGLLVEDEQDHATIACA DLEQPIYVGHGISSRAENKKVTYALRPEKLLMSLQKPEEIEHPDFNWTKGEVYDIAYL GGHSVYHIQLPSGKIVQAFIANAERHGKRPTWDDQVFLYWEDDSGVVLQS" misc_feature 156981..158063 /locus_tag="B565_0133" /note="putrescine transporter ATP-binding subunit; Provisional; Region: potG; PRK11607" /db_xref="CDD:183226" misc_feature 156984..157679 /locus_tag="B565_0133" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 157080..157103 /locus_tag="B565_0133" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(157089..157094,157098..157106,157218..157220, 157446..157451,157548..157550) /locus_tag="B565_0133" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 157209..157220 /locus_tag="B565_0133" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 157374..157403 /locus_tag="B565_0133" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 157434..157451 /locus_tag="B565_0133" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 157458..157469 /locus_tag="B565_0133" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 157536..157556 /locus_tag="B565_0133" /note="H-loop/switch region; other site" /db_xref="CDD:72971" misc_feature 157815..158063 /locus_tag="B565_0133" /note="TOBE domain; Region: TOBE_2; cl01440" /db_xref="CDD:163979" gene 158069..158974 /locus_tag="B565_0134" /db_xref="GeneID:10486051" CDS 158069..158974 /locus_tag="B565_0134" /codon_start=1 /transl_table=11 /product="Putrescine ABC transporter permease PotH" /protein_id="YP_004390786.1" /db_xref="GI:330827834" /db_xref="GeneID:10486051" /translation="MKFLQRLKRVGGRRLVIGIPFFWLFLFFLLPFVIVVKISFAEAD VAIPPYTDVVSWADNQLTILLNMGNYLLLQEDELYIAAYLGSLKMAFVSTLLCLLIGY PMAYSIARANKETQTVLLLLIMMPTWTAILIRVYAWMGILSNNGLLNSVLLGIGVIDE PLQILNTNLAVYIGIVYSYLPFMVLPLYANLVKHDQSLLEAASDLGARNLTRFWQITV PLSKNGIIAGCMLVFIPVVGEFVIPEMLGGPETLMIGKVLWQEFFNNRDWPVASALAV VMLAVLIIPIILFNRNQAKELEGKA" misc_feature 158315..158863 /locus_tag="B565_0134" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(158363..158368,158375..158380,158393..158395, 158423..158434,158438..158467,158474..158479, 158483..158485,158594..158599,158606..158608, 158612..158614,158621..158626,158630..158632, 158642..158647,158654..158656,158705..158707, 158747..158752,158759..158761,158780..158791, 158798..158803,158840..158845) /locus_tag="B565_0134" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(158441..158485,158780..158797) /locus_tag="B565_0134" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(158483..158485,158579..158581,158798..158800, 158834..158836,158843..158845) /locus_tag="B565_0134" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(158657..158695,158711..158716,158726..158728) /locus_tag="B565_0134" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 158971..159816 /locus_tag="B565_0135" /db_xref="GeneID:10486052" CDS 158971..159816 /locus_tag="B565_0135" /codon_start=1 /transl_table=11 /product="Putrescine ABC transporter permease PotI" /protein_id="YP_004390787.1" /db_xref="GI:330827835" /db_xref="GeneID:10486052" /translation="MMKRFGFAKLMLWLGLLFIYLPMIIMVIYSFNASKLVTVWGGWS LKWYFGLLDNKQLIGSVFRSLEIAFYTAIAAVALGTVAAFVLTRIPHFRGRTLFGGMV TAPLVMPEVITGLSLLLLFVAMAQLVGWPAERGMLTIWIAHTTFCTAYVAIVVSARLR ELDLSIEEAAMDLGAKPWKVFFLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPG STTLPMEVFSAVRLGVKPEINAVASLILLSVSLFTFGSWYLMARAEKRRRAEIAMTTQ MQAVV" misc_feature 159244..159642 /locus_tag="B565_0135" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(159262..159273,159277..159306,159313..159318, 159322..159324,159400..159402,159406..159408, 159412..159414,159418..159420,159427..159432, 159436..159438,159448..159453,159460..159462, 159511..159513,159553..159558,159565..159567, 159586..159597,159604..159609) /locus_tag="B565_0135" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(159280..159324,159586..159603) /locus_tag="B565_0135" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(159322..159324,159385..159387,159604..159606, 159640..159642) /locus_tag="B565_0135" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(159463..159501,159517..159522,159532..159534) /locus_tag="B565_0135" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 159862..160566 /locus_tag="B565_0136" /db_xref="GeneID:10486053" CDS 159862..160566 /locus_tag="B565_0136" /codon_start=1 /transl_table=11 /product="Mosc domain-containing protein" /protein_id="YP_004390788.1" /db_xref="GI:330827836" /db_xref="GeneID:10486053" /translation="MRISLFSGRGTELVPGLTSAIHKQPISAPVRCTFAGLEGDEQCD LHHHGGPDRALHYYPADHYLWWQTWQTALGLPAPRTSWQPAAFGENLSGIGLTEVQAC IGDVYRLGEALIQISQPRSPCFKLNQRFGYGQMSQVMQLNGRCGWLLRVLEEGIVSPE SAMEPVDRPYPELTVKRTADILFNQVRNEADLLMLLENPALSPNWRQHAADWLEHGTV ADWQRRLLGPASLRLA" misc_feature 159868..160542 /locus_tag="B565_0136" /note="6-N-hydroxylaminopurine resistance protein; Provisional; Region: PRK11536" /db_xref="CDD:183182" misc_feature 159967..160356 /locus_tag="B565_0136" /note="MOSC domain; Region: MOSC; pfam03473" /db_xref="CDD:146227" misc_feature 160375..160515 /locus_tag="B565_0136" /note="3-alpha domain; Region: 3-alpha; pfam03475" /db_xref="CDD:190652" gene 160722..160798 /locus_tag="B565_t006" /db_xref="GeneID:10486054" tRNA 160722..160798 /locus_tag="B565_t006" /product="tRNA-Pro" /db_xref="GeneID:10486054" gene complement(161058..161585) /locus_tag="B565_0137" /db_xref="GeneID:10489991" CDS complement(161058..161585) /locus_tag="B565_0137" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390789.1" /db_xref="GI:330827837" /db_xref="GeneID:10489991" /translation="MSAKLAIKPSRALLTQLESMLDEVQTPECRHWLEQELEGYSLSS PLPWYRIVPCRQRGHFLDLKTGKYLTCHINSQTLSQRDLAQIQFIYAREPAAHYLLQR NSGIEPWPEQLLEDYQEQLIPGHLCLQAWHEPVISLRAQLMEGIEHFISEYPKHAALL PQHSFKALRHQHWHI" gene complement(161710..162174) /locus_tag="B565_0138" /db_xref="GeneID:10486055" CDS complement(161710..162174) /locus_tag="B565_0138" /codon_start=1 /transl_table=11 /product="thioesterase (4HBT) superfamily protein" /protein_id="YP_004390790.1" /db_xref="GI:330827838" /db_xref="GeneID:10486055" /translation="MKQMLKKMALSGIANLFAEKMPFNKLIGMQVTHYDFDKVELRIK MDEKLIGNPFHNILHGGVTATLLDVAGGMIVAASCIDELEEFSPSYLKERFARLGTID LRVDYLRPGRGNEFIATAHIIRAGSKVAVARMELHNEEGTHIAFGTGTYLVG" misc_feature complement(161716..162099) /locus_tag="B565_0138" /note="PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not...; Region: PaaI_thioesterase; cd03443" /db_xref="CDD:48038" misc_feature complement(order(161845..161856,161875..161877, 162001..162003)) /locus_tag="B565_0138" /note="CoenzymeA binding site [chemical binding]; other site" /db_xref="CDD:48038" misc_feature complement(order(161854..161856,161860..161874, 161983..161985,161992..161994,161998..162000)) /locus_tag="B565_0138" /note="subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:48038" misc_feature complement(order(161875..161877,161956..161961, 161968..161973,161995..161997)) /locus_tag="B565_0138" /note="PHB binding site; other site" /db_xref="CDD:48038" gene 162308..164143 /locus_tag="B565_0139" /db_xref="GeneID:10486056" CDS 162308..164143 /locus_tag="B565_0139" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase RecQ" /protein_id="YP_004390791.1" /db_xref="GI:330827839" /db_xref="GeneID:10486056" /translation="MTAIAETLPDPQPESPLALLQAVFGYQQFRPGQLEIIEQIVAGR DALVLKPTGGGKSLCYQIPALLRPGLGVVVSPLISLMKDQVDSLRANGVAAVYINSAL SREEMIQNFAAMRRGEIKLVYVSPERLLQHEFMDRLAELPLGLFAIDEAHCVSQWGHD FRPEYAALGRLKQWFPQVPVVALTATADEATRSDMLHRLELNDPFIHTASFDRPNIRY SLVEKFKAAEQLLRYVQSQKGNCGIVYCSSRNRVEEVAERLSRHGCKAAPYHAGLPLE QRQQTQDAFLKDDIEIVVATVAFGMGIDKPNVRFVVHYDIPKNIESYYQETGRAGRDG TPAEALLLYDPADIGRVRRLLDNIENPQQLQVEQYKLNVMAAFAEAQTCRRQVLLNYF GEYNDKPCGNCDICLDPPKSYDGTEDAQKALSCVWRVGQNFGVGYVVEVLRGSLNQRI KDHGHDKLSTYGIGKDQSHEYWMSVIRQLIHKGLLTQNITRNLVLQLTEAARPVLRGD VKLELAVPRLQPISSRKEKRNGLLDNANYDKRLFKELRGLRKQIAEDEEVPPYVVFND ATLVEMAQLMPMTEDEMLAINGVGHRKLERFGEAFMDLIIDYCRR" misc_feature 162362..164131 /locus_tag="B565_0139" /note="ATP-dependent DNA helicase RecQ; Provisional; Region: PRK11057" /db_xref="CDD:182933" misc_feature 162437..162865 /locus_tag="B565_0139" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 162464..162478 /locus_tag="B565_0139" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 162752..162763 /locus_tag="B565_0139" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature 162953..163333 /locus_tag="B565_0139" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(163046..163057,163115..163120,163193..163201) /locus_tag="B565_0139" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(163217..163219,163280..163282,163292..163294, 163301..163303) /locus_tag="B565_0139" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature 163547..163822 /locus_tag="B565_0139" /note="RQC domain; Region: RQC; pfam09382" /db_xref="CDD:192276" misc_feature 163919..164122 /locus_tag="B565_0139" /note="HRDC domain; Region: HRDC; cl02578" /db_xref="CDD:154997" gene complement(164211..164513) /locus_tag="B565_0140" /db_xref="GeneID:10486057" CDS complement(164211..164513) /locus_tag="B565_0140" /codon_start=1 /transl_table=11 /product="cytochrome c553" /protein_id="YP_004390792.1" /db_xref="GI:330827840" /db_xref="GeneID:10486057" /translation="MQKWVYALPLLALAWGHQAKAADIEAGKAKAAVCAACHGVEGKA MIPNYPHLAGQNAAYLVKQLKAFKDGTRKEPLMDPFMAPLTDADIDNLAAFYASLK" misc_feature complement(164214..>164393) /locus_tag="B565_0140" /note="Cytochrome c; Region: Cytochrom_C; cl11414" /db_xref="CDD:196222" gene 164619..166046 /locus_tag="B565_0141" /db_xref="GeneID:10486058" CDS 164619..166046 /locus_tag="B565_0141" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390793.1" /db_xref="GI:330827841" /db_xref="GeneID:10486058" /translation="MKLINTFATELPWACEPVAPQPLQQPRLLHLNRALLDELGLGGV SEADWIACCGEGKVLPGMQPVAQVYAGHQFGGYSPRLGDGRALLLGEQLAPDGQRWDL HLKGAGKTPFSRFGDGRAVLRSSIREYLASEALHALGIPTTRALVLVGSQEPVYRERV ETGATVLRTTPSHLRFGHIEYFAWSGQGEKIPPLIDYLLRYHFPELESGAELFAEVVR RTARLIAKWQAAGFCHGVMNTDNMSLLGLTLDYGPYGFIDAYVPDFVCNHSDPAGRYA LDQQPAVGYWNLQKLAQALAGHVDGDALAAALAQYEQQLMLHYSELMRAKLGLAVWEE DDPALFRELFRLLAAHKVDYHLFLRRLGEVTQEGAWPASLLVLLPEPLGWQAWLERYR ARLMREGSEDVVRKAQMDAINPKYVLRNALAQQVIEAADAGDMQPFGRLFAALQRPYD EQPEYEDLATPTPAWYCGGELSCSS" misc_feature 164631..166043 /locus_tag="B565_0141" /note="Uncharacterized conserved protein [Function unknown]; Region: COG0397; cl00428" /db_xref="CDD:193814" gene 166057..166344 /locus_tag="B565_0142" /db_xref="GeneID:10486059" CDS 166057..166344 /locus_tag="B565_0142" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390794.1" /db_xref="GI:330827842" /db_xref="GeneID:10486059" /translation="MSWQIKQVDSEAGVVTLDCPALDWDTFPLLAQALLREWELQPLE QDAGADRHSWLLVFEGSQFRLEYEHYSGCWLEAVRPADREALLWLARQHKA" misc_feature 166063..166338 /locus_tag="B565_0142" /note="Protein of unknown function (DUF3630); Region: DUF3630; pfam12305" /db_xref="CDD:152740" gene 166504..167178 /locus_tag="B565_0143" /db_xref="GeneID:10486060" CDS 166504..167178 /locus_tag="B565_0143" /codon_start=1 /transl_table=11 /product="putative preQ0 transporter" /protein_id="YP_004390795.1" /db_xref="GI:330827843" /db_xref="GeneID:10486060" /translation="MNLTPAQYQTALVRLSLFHILIIASSNYLVQLPITVFGFHTTWG AFSFPFIFLATDLTVRIFGAGLARKIIQTVMLPALAVSYALSVLFFEGSFQGVGHLAE FNLFVARIALASFMAYLVGQFMDVVVFNRLRLLKQWWIAPAASTLFGNLVDTIAFFSV AFWRTTDPFMAEHWVEIATVDYVFKLLISLGLFVPLYGVLLRYLSRKLVGEAGLSSLQ TATRQA" misc_feature 166504..167127 /locus_tag="B565_0143" /note="Uncharacterized ACR, YhhQ family COG1738; Region: DUF165; cl00756" /db_xref="CDD:193931" gene complement(167449..167934) /locus_tag="B565_0144" /db_xref="GeneID:10486061" CDS complement(167449..167934) /locus_tag="B565_0144" /codon_start=1 /transl_table=11 /product="Regulator of ribonuclease activity A" /protein_id="YP_004390796.1" /db_xref="GI:330827844" /db_xref="GeneID:10486061" /translation="MEYNTSELCDIYQDMVDVLEPMLCSFGGRASFGGVITTVKCFES NGLIRELVKENGLGRVLLIDGGGSMRRALIDSDIATTAAENDWEGIVCYGCVREVDIL EDLDIGIQALAAIPVGADSKDVGETDLPVNFGGVTFLPDDHLYADTTGVILSPEALDI E" misc_feature complement(167458..167934) /locus_tag="B565_0144" /note="Demethylmenaquinone methyltransferase; Region: Methyltransf_6; cl00480" /db_xref="CDD:186024" gene 168081..169934 /locus_tag="B565_0145" /db_xref="GeneID:10486062" CDS 168081..169934 /locus_tag="B565_0145" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004390797.1" /db_xref="GI:330827845" /db_xref="GeneID:10486062" /translation="MLIRHKLILNTVLVAVAMLVLSGLFIYSSQVHRHLTEAQRNIDQ LEIAMLNLRRAEKDFLIRKDMTFVERFNQGLSDFHLHNRELVTDDNLAAVEGELTRLD QQISGYGKAFNDLVAQQQKIGLGPEEGLYGKLRAAVHEVENGLKQLDQQGLLITMLQL RRAEKDFMLRSDIQYLERFETLHKSFQDSLATLPEADRGKLEQASKQYRQDFVALVQG MQVLGLKEDEGLRNQMRDLVHQTEQGFAAVDQHIVAELERQSARLNSLMLVCGGVIVV LIGIMSVLLGRSIDRPITQVNDTVNRIRQDNDLRLKIELRGADEMAQLAGNLDVMLGG FRNLIGDVKQSVHTLTEAADHLSANVKRTSEGAARQLQETDMVATASTEMGSTIEEIA RNTEQAANNAQATNNKAMEGRAAVENTVEQIRSLAGNLESSSREVSQLQKESETIGSV LDVIRGIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLAIRTQKSTQEIAGIIS SLQKQTGSIVEVMATCREQGNRSSDQASTAGELLGQITQDVTNIMDMSTQIAAAIEQQ SLVANEVNRNVNNIRDIAQESSIMAEENARSSEGLNEQAQLLNKAVAKYRV" misc_feature 169143..169928 /locus_tag="B565_0145" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 169314..169931 /locus_tag="B565_0145" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 170057..170707 /locus_tag="B565_0146" /db_xref="GeneID:10486063" CDS 170057..170707 /locus_tag="B565_0146" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390798.1" /db_xref="GI:330827846" /db_xref="GeneID:10486063" /translation="MAKLLVAAFGLLCSCLVLAGPAPQATPLKPGMEPLLSWFNGAFT SREQASYDSRFTSAELRLMEIWPGYQGYRWVYAEQYLSLRSVRPFRQRIYRFSPAPDG RILMAELTMPRATDFAGAWHDPALLDSLTPQQLSLRHGCEIWLTRTPSGEYAGHTRVG HCSTDFGGATTLVQHIWIGPDSVRLLDRAYDNAGSPRWGSPGEGYVYLRRSKGFGQ" misc_feature 170153..170683 /locus_tag="B565_0146" /note="CpeT/CpcT family (DUF1001); Region: CpeT; pfam06206" /db_xref="CDD:191471" gene complement(170808..171023) /locus_tag="B565_0147" /db_xref="GeneID:10486064" CDS complement(170808..171023) /locus_tag="B565_0147" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L31" /protein_id="YP_004390799.1" /db_xref="GI:330827847" /db_xref="GeneID:10486064" /translation="MKAGIHPDYVAITAKCSCGNVINTFSTIGKDLNLDVCSECHPFY TGKQKEVSSGGRVDKFNKRFGAMTTKK" misc_feature complement(170811..171023) /locus_tag="B565_0147" /note="Ribosomal protein L31; Region: Ribosomal_L31; cl00377" /db_xref="CDD:185951" gene 171171..173378 /locus_tag="B565_0148" /db_xref="GeneID:10486065" CDS 171171..173378 /locus_tag="B565_0148" /codon_start=1 /transl_table=11 /product="Primosomal protein" /protein_id="YP_004390800.1" /db_xref="GI:330827848" /db_xref="GeneID:10486065" /translation="MNSSQTLDLVRVAVPVPLRRHFDYLSPLPLPAPGCRVEIPFGPQ TLVGLVVDHPADSQVPRNKLKPIKRVLDTAPVLGPDILALMNWSASYYQHPLGEVLPH ALPVLVRKGEPAAYRELEFWFATEAGMAIDLNELKRAAKQQQALALLRKGPQTPSALK QEEIQGAALTALEKKGLLEKRSLEPSHDGDWAARFEPGEGLRLNGEQALAVSAVTSQS DKFGAFLLDGITGSGKTEVYLSILEPLLKAGKQALVMVPEIGLTPQTINRFRRRFNVP VVAMNSAMNDRERLDAWLACRDGGAAILIGTRSAVFTPFHNLGIIIIDEEHDGSFKQQ DGFRYHARDLAVMRAHRAGIPILLGSATPSLETLHNARTGKYHHLTLTRRAGNAQTAR QVILDIKNVRLQAGLSPQLEQLMAEHLAAGNQVMLFLNRRGYAPALICHQCGWSAACE RCDAWYTWHQAGRRLHCHHCDSVRPLPHHCPECGSNELIGSGVGTEQLEQLLTTVFPQ YPVVRIDRDNTRRKGELETHLGDIKAGKYKILIGTQMLAKGHHFPDVTLVGLLDVDGA LFSADFRAAEKLAQLYTQVAGRAGRASKPGLVVLQSHHPEHALLQDLTQNGYGHFADT ALKERRLLGLPPFSYQGLFRAEANGRDEVQLFLARLADTLRRARYPHVQVLGPISGFM ERKAGKFRMQLLVQGPNRAPLAQLLDWAVKELEGWPETKRVRWSLDIDPTELS" misc_feature 171234..173372 /locus_tag="B565_0148" /note="primosome assembly protein PriA; Validated; Region: PRK05580" /db_xref="CDD:180144" misc_feature 171840..172259 /locus_tag="B565_0148" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 171861..171875 /locus_tag="B565_0148" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 172140..172151 /locus_tag="B565_0148" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature 172656..172946 /locus_tag="B565_0148" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cl14882" /db_xref="CDD:197446" gene complement(173442..174509) /locus_tag="B565_0149" /db_xref="GeneID:10486066" CDS complement(173442..174509) /locus_tag="B565_0149" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390801.1" /db_xref="GI:330827849" /db_xref="GeneID:10486066" /translation="MRIDHYDLQGEVQYRQQQTQSRKVRNLAPVPPVVNPPEDNNAAA AGERSSTLTLTSALTLQTTRQSAASQQAATPPAPPAADVGKEQDGIPDDGLDNRQRLI KLMIEAMLGHEIELPKPINPSEEGGDGVTQGDAAAQAAEPDQLVEVTDTLLQQEQLNV VASASVATRDGQTIQLDLGFVLDWRQLEVSQRRTTLNALKDPLVLSLDGKIADLTEAR VTFDIDQDGKEDSLPGLSEGSGFVALDRNGNGTIDDGGELFGARSGNGFGELATLDED GNGVLDEGDSQFSALQFWHPEHAPIALVELGIGAILLRPLDTPFNHLGESGSQGVLRQ SGLYLTEQGKGGWVQQIDLRV" gene 174732..176165 /locus_tag="B565_0150" /db_xref="GeneID:10486067" CDS 174732..176165 /locus_tag="B565_0150" /codon_start=1 /transl_table=11 /product="nucleoside-diphosphate-sugar epimerase" /protein_id="YP_004390802.1" /db_xref="GI:330827850" /db_xref="GeneID:10486067" /translation="MRNCLVMGAAGYIGSYLVPHLQTLGYRVIAGARRPCRLPEGVEF RLADSLKPITLLPALAGIDTVFYLVHAMGAGADFHRLEQQGVKNFAAAARAAGVRRII YLGAIQPEQCNSRHLNSRRHCGELFRDSGVPTVELRAGIIIGPGSAAFEVMRDLVFNL PMMVTPKWVRSRTPPIALSNLLHYLGGLVEADEVDGLIFNAVGPELLSYQQQLQKFAA HIGKRCPIIPIPFLSPRLSAWWLQFVTSVPQPVAKALVGGLKHDIPADDGPLRALLPQ TLLSFDEALAESLALEQKLGAEQQGQETPLGLRWRHPEYGFYDRTASGDAICLASPEV VWQVLQQLGGEQRYFYMNELWVVREWMDHLIGGPARTRGRTNPDRFVKGDMLDSWQIL GVDEGRRLDLLFNMKAPGVGRLEFNILPEESGLTRIRVTAHWHPQGAWGLAYWLAMLP FHLFIFQGMTEAIARQAEARAGIPVMD" misc_feature 174741..175601 /locus_tag="B565_0150" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 174744..175559 /locus_tag="B565_0150" /note="Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]; Region: COG0702" /db_xref="CDD:31046" misc_feature order(174753..174755,174759..174764,174768..174770, 174825..174833,174933..174941,175041..175049, 175077..175079,175089..175091,175146..175157) /locus_tag="B565_0150" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature order(174975..174977,175047..175049,175077..175079, 175089..175091) /locus_tag="B565_0150" /note="active site" /db_xref="CDD:187535" gene 176263..177561 /locus_tag="B565_0151" /db_xref="GeneID:10486068" CDS 176263..177561 /locus_tag="B565_0151" /codon_start=1 /transl_table=11 /product="Tryptophan permease, tryptophan/tyrosine permease family" /protein_id="YP_004390803.1" /db_xref="GI:330827851" /db_xref="GeneID:10486068" /translation="MAKAGIMPRSCLPRIDNQSEKEGIMKKKPSILGGACIIASVCVG AGMLGLPSSGAGAWTLWSVLALTVTMVMMTLSGWMLLESFQHHDMRVSFNTVTRELLG EKLNLLNNLSVYFVGGILLYAYITSSGAILQGILGIDSKLASVLFVALFSAVVWHSTR AVDRISVVLIAFMILSFALGVAGLLGSIKLPTLLDLAGSESRYAPYAMAMLPVALTSF GYHHSVASLRAYYQNEQQARWAILGGTLIALALYVLWLLGIFGNLPRQDFAPVIAKGG DVSVLLSALSGVIESEKVASAINGFSMAAILSSFIGVGLGVFDYLADLFKFDNSRAGR CKTWAVTFLPPLVLSLLFPFGFLLAIGYAGAAATIWTCIIPALLVLRTRARAERGEVT PHFVTPGGKLMAWLLILFGLATALFHFLSMANLLPVYLGN" misc_feature 176329..177540 /locus_tag="B565_0151" /note="Amino acid permeases [Amino acid transport and metabolism]; Region: SdaC; COG0814" /db_xref="CDD:31156" misc_feature 176359..177495 /locus_tag="B565_0151" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene 177816..179057 /locus_tag="B565_0152" /db_xref="GeneID:10486069" CDS 177816..179057 /locus_tag="B565_0152" /codon_start=1 /transl_table=11 /product="putative NADP-dependent malic enzyme" /protein_id="YP_004390804.1" /db_xref="GI:330827852" /db_xref="GeneID:10486069" /translation="MSDLRQEALDYHALPVPGKIAIALTKPAETARDLALAYSPGVAE PVREIAANPADAYRYTGKGNLVAVISNGTAILGLGNLGPLASKPVMEGKALLFKRFAG IDAIDIEVKHETSQQFIDTVAAIADTFGGINLEDIKAPECFEIEEALIARCDIPVFHD DQHGTAIVTAAGLLNALEVQGKQISDSRIVCMGAGAAATACMDLLIKCGARAHNIFML DRQGVIHTGRSDLNKYKQRFANETPLRTLMDVIEGADVFVGVSGPDVLPAEAVALMAP NPVIFACSNPDPEIKPALAHAVRSDLIMGTGRSDYPNQINNVLCFPFIFRGALDARAS RINDAMKIAAVEAIRALAKEPVPVEVLIAAGVSELAFGKDYVIPKPMDARLLPRVARA VALAAVASGIARIELPADYML" misc_feature 177816..179039 /locus_tag="B565_0152" /note="Malic enzyme [Energy production and conversion]; Region: SfcA; COG0281" /db_xref="CDD:30629" misc_feature 177864..178265 /locus_tag="B565_0152" /note="Malic enzyme, N-terminal domain; Region: malic; pfam00390" /db_xref="CDD:144108" misc_feature 178299..178961 /locus_tag="B565_0152" /note="NAD(P) binding domain of malic enzyme (ME), subgroup 2; Region: NAD_bind_2_malic_enz; cd05311" /db_xref="CDD:133453" misc_feature order(178395..178406,178470..178475,178593..178598, 178608..178610,178662..178670,178734..178736, 178758..178760,178764..178766) /locus_tag="B565_0152" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:133453" gene 179234..180106 /locus_tag="B565_0153" /db_xref="GeneID:10486070" CDS 179234..180106 /locus_tag="B565_0153" /codon_start=1 /transl_table=11 /product="YihY family protein" /protein_id="YP_004390805.1" /db_xref="GI:330827853" /db_xref="GeneID:10486070" /translation="MQQPVSGRLAHVLSFLRHDGRHFAQFVWGRFQQDRLTVTAGYLA YVTLLSLVPMIAVVFGMMSAFPVFQSLKQAMEQFVYHNFVPTAGDMLKEYIDGFVANA TNTTAVGIGALVVVALMLISAIDKNLNYIWRSTQGRPLAQAFAMYWMILTLGPVLIGA SIAISSYIFSLRLFGAESLFGIGYLLLRGLPFLFSVLTFLLVYTVVPNCKVRLIHAFI GALVAATLFELAKRGFAIYITNFPSYQAIYGALATIPILFVWVYLSWLVVLLGAETTA CLGEYEKPASEELG" misc_feature 179267..180100 /locus_tag="B565_0153" /note="Ribonuclease BN-like family; Region: Ribonuclease_BN; cl07918" /db_xref="CDD:195647" gene 180193..180630 /locus_tag="B565_0154" /db_xref="GeneID:10486071" CDS 180193..180630 /locus_tag="B565_0154" /codon_start=1 /transl_table=11 /product="D-tyrosyl-tRNA(Tyr) deacylase" /protein_id="YP_004390806.1" /db_xref="GI:330827854" /db_xref="GeneID:10486071" /translation="MIALIQRVSEASVTVEGEVTGAIGQGLLVLLGVEQGDDEAKADK LLHRVSGYRIFPDQEGKMNLNVSQIGGSLLVVSQFTLAADTKRGMRPSFSCGAHPSEA ERLYDYFVAKASASGIPTETGRFAADMKVALVNEGPTTFWLQV" misc_feature 180193..180627 /locus_tag="B565_0154" /note="D-Tyrosyl-tRNAtyr deacylases; a class of tRNA-dependent hydrolases which are capable of hydrolyzing the ester bond of D-Tyrosyl-tRNA reducing the level of cellular D-Tyrosine while recycling the peptidyl-tRNA; found in bacteria and in eukaryotes but...; Region: Dtyr_deacylase; cd00563" /db_xref="CDD:29648" misc_feature order(180211..180213,180421..180435,180469..180471, 180613..180615) /locus_tag="B565_0154" /note="putative active site [active]" /db_xref="CDD:29648" misc_feature order(180322..180324,180331..180339,180343..180354, 180421..180426,180430..180435,180439..180447, 180451..180465,180469..180471,180571..180624) /locus_tag="B565_0154" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29648" misc_feature order(180334..180336,180349..180351,180451..180453, 180460..180462) /locus_tag="B565_0154" /note="putative tRNAtyr binding site [nucleotide binding]; other site" /db_xref="CDD:29648" gene complement(180619..181299) /locus_tag="B565_0155" /db_xref="GeneID:10486072" CDS complement(180619..181299) /locus_tag="B565_0155" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390807.1" /db_xref="GI:330827855" /db_xref="GeneID:10486072" /translation="MDFNLQAYQADHLLHLSVKPQRRLTVQENDQHRWLEIDGVVQSA MSLANPATLCLPHQRVIACLLPERAEQILELGLGGGDLTRHLCQRWPDARHECVDLDE EVLTVYQQFFQHQESDERAAPALHQADALAFLEQSEQQYDLILLDLFSQDGNPLLLFQ ERLYRALAPRLCGTLVINLLPRTELELTHALTLIEQWIGPATPYPVAGLINVIVHVTP RDETSSDL" misc_feature complement(<180754..181194) /locus_tag="B565_0155" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene 181351..182259 /locus_tag="B565_0156" /db_xref="GeneID:10486073" CDS 181351..182259 /locus_tag="B565_0156" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004390808.1" /db_xref="GI:330827856" /db_xref="GeneID:10486073" /translation="MYRVVTPQTAAELDAYYQLRWELLRKPFNLPVGSERDEYDSVAI HRLMLAPDGTPIAVGRLFIGGDEAQIRFMALRPEYRGQGLGAQMVEDLEQLARSEKVK RLVMNARQEAVEFYRKCGFLEVGGGPVSFGRIPHRQMIKSLSPLQTIQYRPEWCQDLT TRWSRGVPISEKMGMHISHYDGQTFHLKANLAANFNVHGSMFAGSVYSQCVLAGWGLI WLQLKEEGLVGEPVLAESTIKYHGPVDEEPEARVAREGMPAVLQPLKRGEPATFSLKI QLFSGSKLAAEFCGHYVVQPPRRPGQ" misc_feature 181387..181725 /locus_tag="B565_0156" /note="ribosomal-protein-alanine acetyltransferase; Region: rimI; TIGR01575" /db_xref="CDD:162430" misc_feature 181504..181665 /locus_tag="B565_0156" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cd04301" /db_xref="CDD:173926" misc_feature order(181567..181575,181603..181608) /locus_tag="B565_0156" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" misc_feature 181816..182238 /locus_tag="B565_0156" /note="The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated...; Region: hot_dog; cl00509" /db_xref="CDD:193847" gene complement(182314..184431) /locus_tag="B565_0157" /db_xref="GeneID:10486074" CDS complement(182314..184431) /locus_tag="B565_0157" /codon_start=1 /transl_table=11 /product="AsmA family" /protein_id="YP_004390809.1" /db_xref="GI:330827857" /db_xref="GeneID:10486074" /translation="MNSWLRGLLYTFAFLLLFVWVALGLFDAERAKGPIASWISQQTG VPVTIGRLVFNPLHPYTLLAEQVRYGDAVSLDKIYLEIESIDWLSRDVRIAHLDLIRP AIKLPLPNQLPSLPVHSLTISDSTIDRLSLESPELTLRGLNATLSDWELIDPKRQPQA NLSLNIGQLETPQFTFARLNLQGQLEGEVLRTDKLVTNLFDGLLETGMVLDWPARTLQ LHDLKARGMRVELGDLTQQGFPQRFPLQSVSLDRGQLDGVSLNDINQELSFNNFSGQL TAFNWQAGNQPTGYLSGTLGDMGRGLFQLEEIKGKLAFSPQQIDGELQGKAYEGEFNV ELSLDTQQQKLTLKDVALSGMDISLPQGWWQDWQSWRPQQVDIRKLAFDKLKVLSFDD TLPLSLTGWQLYLSDLALRDNQPGPLLGRARIESKWFELVWDGLSARNGELDGELTPS SWQLGKLTSSLPDEGTLSLSGQWGREPGQGSRLQLQATKLDLQQWGKIFHSPVSFAGK ADVSADLQAEHGKTAGEWRQTLQGSFALDADEPFWDKVKIDPLLDEWFKGATPPTLTP EQLWQAMQEGDTPFYRIKLQGKIDKGQLQVEQAGASTITHLLALQGGIDLVNEQWQLD LGVLNGNRCAELLGQWRGPLTEPTLAWSFPQKQDACGWEVGVRYPPQGNSAPLWRPAP APKAQNQAQVQTQAGQTSESQQG" misc_feature complement(182824..183891) /locus_tag="B565_0157" /note="AsmA family; Region: AsmA; pfam05170" /db_xref="CDD:147383" gene complement(184575..186644) /locus_tag="B565_0158" /db_xref="GeneID:10486075" CDS complement(184575..186644) /locus_tag="B565_0158" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase RecG" /protein_id="YP_004390810.1" /db_xref="GI:330827858" /db_xref="GeneID:10486075" /translation="MKLDKIPLDSLKGVGSKMQEKLERLGLATVQDLLFHLPLRYEDR TQVWPIGDLPPGLHGAVEGEIQDTQLVMGRRRMMVCRISDGTGTLTLRFFNFTAAQKN SLAAGRLIRCFGEVRPGKYGLEMAHPEYKLLGEEQAGQTEEALTPVYPTTEGLRQLTL RNLTDQALAQLDLYGVEELLPAGLYPHQIELAAALKLLHRPPPSVALPLLESGQHPAQ QRLVLEELLAHNLSVLKVRAQAQTQLARALKPAPELVEQLLGALPFKPTGAQSRVVTE ISKDLQQSHPMMRLVQGDVGSGKTLVAALAALQAIGNGCQVGLMAPTELLAEQHAINF AKWLEPLGIGVGWLAGKQKGKAREESLAAIKDGSVKMVVGTHAIFQEQVVFQRLALVI IDEQHRFGVHQRLALREKGEREGVHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPP GRTPITTVALPDSRRGDVIERVKLACTEGKQAYWVCTLIEESEVLECQAAEDTAAELQ NLLPGLHIGLVHGRMRPVEKQRVMEEFKAGILQLLVATTVIEVGVDVPNASLMIIENP ERLGLAQLHQLRGRVGRGAVASHCVLLYHAPLSKTAQSRLGVLRETNDGFLIAQRDLE LRGPGELLGTRQTGLADLKIADLVRDQPLIPQVQKMARFLMDRHPSHVEPLIRRWLGL RDHYSNA" misc_feature complement(184578..186644) /locus_tag="B565_0158" /note="ATP-dependent DNA helicase RecG; Provisional; Region: PRK10917" /db_xref="CDD:182836" misc_feature complement(<186543..>186638) /locus_tag="B565_0158" /note="Y-family of DNA polymerases; Region: PolY; cl12025" /db_xref="CDD:196304" misc_feature complement(186246..186464) /locus_tag="B565_0158" /note="RecG_wedge_OBF: A subfamily of OB folds corresponding to the OB fold found in the N-terminal (wedge) domain of Escherichia coli RecG. RecG is a branched-DNA-specific helicase, which catalyzes the interconversion of a DNA replication fork to a four-...; Region: RecG_wedge_OBF; cd04488" /db_xref="CDD:72960" misc_feature complement(order(186270..186272,186348..186350, 186363..186365,186414..186416,186432..186434)) /locus_tag="B565_0158" /note="ssDNA binding site; other site" /db_xref="CDD:72960" misc_feature complement(order(186249..186251,186306..186308, 186312..186314,186318..186320)) /locus_tag="B565_0158" /note="generic binding surface II; other site" /db_xref="CDD:72960" misc_feature complement(185364..185780) /locus_tag="B565_0158" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature complement(185745..185759) /locus_tag="B565_0158" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature complement(185454..185465) /locus_tag="B565_0158" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature complement(184866..185285) /locus_tag="B565_0158" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature complement(order(185001..185009,185082..185087, 185151..185156,185181..185186)) /locus_tag="B565_0158" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(order(184896..184898,184905..184907, 184917..184919,184983..184985)) /locus_tag="B565_0158" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene complement(186835..188184) /locus_tag="B565_0159" /db_xref="GeneID:10486076" CDS complement(186835..188184) /locus_tag="B565_0159" /codon_start=1 /transl_table=11 /product="phosphatidylserine synthase" /protein_id="YP_004390811.1" /db_xref="GI:330827859" /db_xref="GeneID:10486076" /translation="MHSSAHYRQLLARLPQIAVAADQFEVLYSAQDFKRRILALIASA TRRIYLVALYLQDDEAGREILSALYAAKQLNPALDIKLFVDFHRAQRGLIGKGKQGGN HLMYQAMAAEHEHQIEIYGVPVKGRELLGVLHLKGFIFDDVVLYSGASLNDIYLHQQD RYRFDRYHQITSPELARSMVNYVDDLFVKSDAVQRLDHNDIPSAKQLKGPIRRFKQNL RQSQYRFSTMPVNTQEVAVTPMVGLGKRNNQLNLMIRNLVRATEREIFICTPYFNPPK ELSKDIEDLLQRGCKVTIVVGDKTANDFFIPPEEKFSTIGGLPYLYETNLRKFAERNQ RHIDDGRLNLMLWCCERNSYHLKGIFVDDEWALLTGNNLNPRAWALDLENGLLVHDRR HLLRPQFNAERENILTNTKRISHFDQVEQIQDYPEQVRKLLGRIHRVKAHLLLKRII" misc_feature complement(186838..188184) /locus_tag="B565_0159" /note="phosphatidylserine synthase; Provisional; Region: pssA; PRK09428" /db_xref="CDD:181848" misc_feature complement(187627..188145) /locus_tag="B565_0159" /note="Catalytic domain, repeat 1, of phosphatidylserine synthases from gram-negative bacteria; Region: PLDc_PSS_G_neg_1; cd09134" /db_xref="CDD:197232" misc_feature complement(order(187627..187629,187639..187641, 187648..187653,187663..187665,187675..187677, 187681..187683,187687..187701,187741..187743, 187747..187749,187777..187797,187807..187821, 188107..188109,188113..188115)) /locus_tag="B565_0159" /note="domain interface [polypeptide binding]; other site" /db_xref="CDD:197232" misc_feature complement(order(187690..187692,187735..187737, 187741..187743,187777..187779,187783..187785)) /locus_tag="B565_0159" /note="putative active site [active]" /db_xref="CDD:197232" misc_feature complement(187783..187785) /locus_tag="B565_0159" /note="catalytic site [active]" /db_xref="CDD:197232" misc_feature complement(186838..187482) /locus_tag="B565_0159" /note="Catalytic domain, repeat 2, of phosphatidylserine synthases from gram-negative bacteria; Region: PLDc_PSS_G_neg_2; cd09136" /db_xref="CDD:197234" misc_feature complement(order(186967..186972,186979..186981, 186991..186993,187000..187002,187018..187020, 187024..187047,187057..187059,187075..187086, 187117..187131,187456..187458,187462..187482)) /locus_tag="B565_0159" /note="domain interface [polypeptide binding]; other site" /db_xref="CDD:197234" misc_feature complement(order(187036..187038,187069..187071, 187075..187077,187114..187116,187120..187122)) /locus_tag="B565_0159" /note="putative active site [active]" /db_xref="CDD:197234" misc_feature complement(187120..187122) /locus_tag="B565_0159" /note="catalytic site [active]" /db_xref="CDD:197234" gene complement(188335..189675) /locus_tag="B565_0160" /db_xref="GeneID:10486077" CDS complement(188335..189675) /locus_tag="B565_0160" /codon_start=1 /transl_table=11 /product="Low-affinity gluconate transporter" /protein_id="YP_004390812.1" /db_xref="GI:330827860" /db_xref="GeneID:10486077" /translation="MSDLSLIMTAAGSIVLLLFLVMKARLHAVVALILVSMVAGLAAG MNPADIANTIQKGMGGTLGFVAVVVALGAMFGKVMEVTGALDRVAHTLLGKFGVKRAN WAMALTGFVCALPLFFDVAVVLLIGVAFAIVRRGGGSVVKIGIALLAGIATCQAFLIP APGPILVASQLGADFGYMILFGLIAAVPALILAGPLFGDFISKIVDVPLPADAQNSVH DDSKSLPSFGLAMGLIGLPLLLIGLKTIVGRFVEAGSTLHNWLEFIGHPFTAIMVACL AAFYLLGIRRGMSRDEVMSVCNSAIQPAGVIILVTGAGGVFKQVLVDSGVGAALGNML ADSGLPIVALAFILAAAVRVIQGSATVAMLTACGLVLPMLEPLGLNGAQLAAVTIAIG GGAIVLSHVNDSGFWLANRYLGLTEKQTLQTWTVMETIIGTTGGVMAMIIYSFL" misc_feature complement(188338..189675) /locus_tag="B565_0160" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature complement(188338..189666) /locus_tag="B565_0160" /note="gluconate transporter; Region: gntP; TIGR00791" /db_xref="CDD:129873" gene 189921..190430 /locus_tag="B565_0161" /db_xref="GeneID:10486078" CDS 189921..190430 /locus_tag="B565_0161" /codon_start=1 /transl_table=11 /product="Shikimate kinase" /protein_id="YP_004390813.1" /db_xref="GI:330827861" /db_xref="GeneID:10486078" /translation="MAGKCIIVMGVCGSGKSSVGLKVAEALGAKFIDGDDLHPKANIQ KMAGGNPLNDEDRAPWLERIRDAAYSLEQKNETGIIVCSALKKKYRDQIREGNESVSF IFLDGSQPLILERMRARKGHFMRESMVQSQFDTLERPDGEAGVFHIDIDGTFEQVVDR AVTALEQAQ" misc_feature 189933..190370 /locus_tag="B565_0161" /note="Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate. The resulting product gluconate-6-phoshate is an important precursor of gluconate metabolism. GntK acts as a dimmer composed of two identical subunits; Region: GntK; cd02021" /db_xref="CDD:30194" misc_feature 189945..190418 /locus_tag="B565_0161" /note="Gluconate kinase [Carbohydrate transport and metabolism]; Region: GntK; COG3265" /db_xref="CDD:33076" misc_feature order(189948..189971,190017..190019,190023..190025, 190263..190265,190275..190277) /locus_tag="B565_0161" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:30194" misc_feature order(189954..189959,190275..190277) /locus_tag="B565_0161" /note="Gluconate-6-phosphate binding site [chemical binding]; other site" /db_xref="CDD:30194" gene 190427..192223 /locus_tag="B565_0162" /db_xref="GeneID:10486079" CDS 190427..192223 /locus_tag="B565_0162" /codon_start=1 /transl_table=11 /product="phosphogluconate dehydratase" /protein_id="YP_004390814.1" /db_xref="GI:330827862" /db_xref="GeneID:10486079" /translation="MIHQVISDVTARIRERSVARRQAFLARIQRQAEQGKTRAALACG NLAHAVAACSSDEKGRILDMTRANVGIVTAYNDMLSAHQPYQGYPDQIKAVLAELGHS AQVAGGVPAMCDGVTQGQPGMDMSLFSRDLIAQATALSLSHNTFDATLLLGICDKIAP GQIMGALSHAHLPTAFVPAGPMASGISNDEKVKVRQKYAAGEVGRDALLEMECGAYHA AGTCTFYGTANTNQLVFEAMGLMLPGSAFVHPHSELRRALTAEAARRISAMIPGSPAY RPLSEVLDERSLVNGLVALLASGGSTNHSIHMVALARAAGLVLTWDDISDLSDVVPLL VRMYPNGPADVNAFEQAGGVPGLMRRLAQEGLIHMDATPVFGEMQDYLSRPALVDGQL VWQPVGESGDASVLSPSGSVFQATGGTKLLAGNLGRAVVKVSAVAPEYRVIEAPARVF SSQHAVEAAYKAGELNQDAVIVVRHNGPAANGMPELHKLMPVLGNLQKAGYKVALVTD GRLSGASGKIPAAIHVTPEALHGGAIGLLADGDLLRVDAVNGSLDCLTDLSGRTQAEI DLTLEQEGWGRELFSVMRRAVSSAECGATIFD" misc_feature 190430..192220 /locus_tag="B565_0162" /note="Dehydratase family; Region: ILVD_EDD; cl00340" /db_xref="CDD:185921" misc_feature 190433..192217 /locus_tag="B565_0162" /note="6-phosphogluconate dehydratase; Region: edd; TIGR01196" /db_xref="CDD:130264" gene 192233..192874 /locus_tag="B565_0163" /db_xref="GeneID:10486080" CDS 192233..192874 /locus_tag="B565_0163" /codon_start=1 /transl_table=11 /product="multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase" /protein_id="YP_004390815.1" /db_xref="GI:330827863" /db_xref="GeneID:10486080" /translation="MQNWKVTPAEVFAASPLVPVMVINELDQALPMAKALLDGGISVF EITLRTPVALDAIALIAKAMPDAMVGAGTVLNCEQFDAAVAAGARFVISPGMTPALLA HAAKSTAPLIPGVATPSEVMQALEAGYDHLKFFPAEANGGTKALSAIAAPLPQVKFCP TGGIGPKNVADYLALKCVATVGGSWMLPADAVKSGNWEEVTRLSREAVELVKR" misc_feature 192233..192868 /locus_tag="B565_0163" /note="keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase; Provisional; Region: PRK05718" /db_xref="CDD:180220" misc_feature 192266..192841 /locus_tag="B565_0163" /note="KDPG and KHG aldolase; Region: KDPG_aldolase; cd00452" /db_xref="CDD:188632" misc_feature order(192290..192292,192365..192367,192377..192379, 192449..192451,192629..192631,192635..192637, 192713..192715) /locus_tag="B565_0163" /note="active site" /db_xref="CDD:188632" misc_feature order(192377..192379,192449..192451,192455..192457, 192512..192523,192581..192592,192596..192598, 192608..192610,192635..192640,192674..192676, 192686..192691) /locus_tag="B565_0163" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:188632" misc_feature 192629..192631 /locus_tag="B565_0163" /note="catalytic residue [active]" /db_xref="CDD:188632" gene complement(192959..193966) /locus_tag="B565_0164" /db_xref="GeneID:10486081" CDS complement(192959..193966) /locus_tag="B565_0164" /codon_start=1 /transl_table=11 /product="HTH-type transcriptional regulator GntR" /protein_id="YP_004390816.1" /db_xref="GI:330827864" /db_xref="GeneID:10486081" /translation="MSPTRKRRPTLQDIADQTGVTKMTVSRYLRDPQTVAEGTRERIA AVVEELGYIPNRAPDILSNATSKAIGILIPSLSNQVFSAVIHGIESVTRPAGYQTLLA HYGYSPEREEEQVASLLSYHVDGLILSDSQHTERTRKMIATAGIPVVETMDLPQTPID MVVGMDHRAAARAMVTEMLHRGRRKVVYLGARLDVRTQLRMEGYYQAMTDFGLTGQHL LTEQSSSFTLGGELLDQALVRYPDLDGLFCTNDDLAVGALLQCQAKWIPVPQQIAIAG CNALDIGHAMTPKLASIATPREAIGREAATMLLARLNGQSQPDTRKDIGFSLYVGESL G" misc_feature complement(192965..193954) /locus_tag="B565_0164" /note="gluconate operon transcriptional regulator; Provisional; Region: PRK14987" /db_xref="CDD:184949" misc_feature complement(193796..193933) /locus_tag="B565_0164" /note="Helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators; Region: HTH_LacI; cd01392" /db_xref="CDD:143331" misc_feature complement(order(193802..193804,193811..193813, 193850..193852,193859..193864,193877..193879, 193886..193891,193895..193909,193931..193933)) /locus_tag="B565_0164" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature complement(193796..193813) /locus_tag="B565_0164" /note="domain linker motif; other site" /db_xref="CDD:143331" misc_feature complement(192968..193762) /locus_tag="B565_0164" /note="Ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators; Region: PBP1_GntR; cd01575" /db_xref="CDD:107260" misc_feature complement(order(193082..193084,193133..193135, 193295..193297,193367..193369,193472..193474, 193511..193513,193580..193582,193715..193717, 193724..193729)) /locus_tag="B565_0164" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:107260" misc_feature complement(order(193178..193183,193190..193192, 193202..193204,193286..193288,193601..193609, 193616..193618,193625..193627,193658..193660, 193664..193678,193697..193702,193706..193711, 193718..193726)) /locus_tag="B565_0164" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:107260" gene 194056..194706 /locus_tag="B565_0165" /db_xref="GeneID:10486082" CDS 194056..194706 /locus_tag="B565_0165" /codon_start=1 /transl_table=11 /product="Quinolone resistance determinant QnrA" /protein_id="YP_004390817.1" /db_xref="GI:330827865" /db_xref="GeneID:10486082" /translation="MSRGKQFVDVRFEQQDVEGEQFSECRFIGCNFSWLDLSDSRFID CSFYDRESERGCLLQGCDLREASFLRCDLTMADCSRSQCLGLEMRDCQAVGINFSHAS FANQITAKSYFCEAHLTGNNFSYASFEGSLLEKCELTGNRWQGANLFGASLVGSDLSG SEFGQIDWTSFKLQGCDLRQCDLPGLDLRRVDLQGVQINEDQQQTLLEQIGLVVFP" misc_feature 194071..194670 /locus_tag="B565_0165" /note="Pentapeptide repeats containing protein [Function unknown]; Region: COG1357" /db_xref="CDD:31548" gene complement(194840..196192) /locus_tag="B565_0166" /db_xref="GeneID:10486083" CDS complement(194840..196192) /locus_tag="B565_0166" /codon_start=1 /transl_table=11 /product="Nonpeptidase" /protein_id="YP_004390818.1" /db_xref="GI:330827866" /db_xref="GeneID:10486083" /translation="MRGCEVISQKTSRVGLLAGALFFCLSFGASKPALAANQQLGTMQ SQIKEQQQTIKLSKQELAKLNTQLKADEQAISAAAAKLNQTKKQLKQNQQTLATLQKD KLGLEVQAKHQKQLLAKQAESAFQAGNHDYLKLLLNQQDPAKLSRSLDYYDYLNKARI EAIDTLRATRDKLAKNQQATKETETRLQTLLAEQQEHHQTLLASQQSRAKVRNQLQQS VQDDEQKLTKLVKAEKALKARLEELRRKREEQERRERAERERLAKLKAEQERQRKLAE QRRAEQQRLAAQQNKTVKPAEPAEEVASSKPERGSGISSAGHYSGLKTNGSLRWPVQG PILISYGSPRTAQLKWKGTLIGASEGTQVKAVAPGQVVYADWLDGFGMLLVIDHGKGY MSLYGHNQSLLRQVGQNVEQGEPVALVGDSGGQDRPGLYFEIRYQGEAINPTKWLAKG " misc_feature complement(<195506..196156) /locus_tag="B565_0166" /note="Membrane-bound metallopeptidase [Cell division and chromosome partitioning]; Region: COG4942" /db_xref="CDD:34550" misc_feature complement(194864..195148) /locus_tag="B565_0166" /note="Peptidase family M23; Region: Peptidase_M23; pfam01551" /db_xref="CDD:190031" gene complement(196202..197731) /locus_tag="B565_0167" /db_xref="GeneID:10486084" CDS complement(196202..197731) /locus_tag="B565_0167" /codon_start=1 /transl_table=11 /product="2,3-bisphosphoglycerate-independent phosphoglycerate mutase" /protein_id="YP_004390819.1" /db_xref="GI:330827867" /db_xref="GeneID:10486084" /translation="MSTAKKPLVLVIMDGWGYSTKQEHNAVAAAKTPNLDRLARDYTS TLISGSGLDVGLPDGQMGNSEVGHVNIGAGRIVYQELTRISKDIQDGEFFQNVELAKA VDAAVTNGKAVHIMGLMSPGGVHSHEEHIMGMIEMAAKRGAEKIYLHAFLDGRDVPPR SAQSSIELFDALFAKLGKGRFASMIGRYFAMDRDNRWDRVQQAYDLMTQGKGEFTAES ATEALSAAYARDENDEFVKATRIGEAAPMEDGDALIFMNFRADRAREITRAFVDTDFT GFARAVEPKLNFVMLTEYAADIKTACAYPPTALVNTLGEWLAKQGKTQLRISETEKYA HVTFFFNGGEESCFTGEDREIVASPKVATYDLQPEMSSEELTDKLVAAIKSGKYDVII CNYPNGDMVGHTGVFDAAVKACEAVDHCIGRVTDALAEVGGECLITADHGNAEKMLDE ETGQAHTAHTNLPVPLIYFGRKAEVVEGGKLSDLAPTMLTLMGLPVPPEMTGKPLMIL K" misc_feature complement(196211..197728) /locus_tag="B565_0167" /note="Sulfatase; Region: Sulfatase; cl10460" /db_xref="CDD:195965" misc_feature complement(196208..197725) /locus_tag="B565_0167" /note="Phosphoglyceromutase [Carbohydrate transport and metabolism]; Region: GpmI; COG0696" /db_xref="CDD:31040" gene 197978..198409 /locus_tag="B565_0168" /db_xref="GeneID:10486085" CDS 197978..198409 /locus_tag="B565_0168" /codon_start=1 /transl_table=11 /product="Rhodanese domain-containing protein" /protein_id="YP_004390820.1" /db_xref="GI:330827868" /db_xref="GeneID:10486085" /translation="MQEYLDFAARNPLLTAAWLGLAGTLVYTTVRARLSPVKTVNNHT ATLLINRENATVVDIRSQEEYAKGHLAGAQHLPLTQIQSNNLGPVEKHKDDPIIVVCE SGMTAGGAGRQLSKAGFKQVYVLGGGMAQWRAENLPVTKKR" misc_feature 198107..198376 /locus_tag="B565_0168" /note="Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins...; Region: RHOD; cd00158" /db_xref="CDD:29073" misc_feature 198278..198280 /locus_tag="B565_0168" /note="active site residue [active]" /db_xref="CDD:29073" gene 198460..198930 /locus_tag="B565_0169" /db_xref="GeneID:10486086" CDS 198460..198930 /locus_tag="B565_0169" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecB" /protein_id="YP_004390821.1" /db_xref="GI:330827869" /db_xref="GeneID:10486086" /translation="MADEINNQEVQPEFHIQRVYTKDVSFEAPNTPHIFQKEWQPDVK LDMDTKTNILAENVYEVVLTLTVTCKLETETAFLCEVQQAGIFTIGNLPEPQLAHCLA AFCPNILFPYAREAVANMVSKGSFPQLNLAPVNFDALFAQHMAQAQAQQATAEA" misc_feature 198499..198870 /locus_tag="B565_0169" /note="Preprotein translocase subunit SecB. SecB is a cytoplasmic component of the multisubunit membrane-bound enzyme termed Sec protein translocase, which is the main constituent of the General Secretory (type II) Pathway involved in translocation of nascent...; Region: Translocase_SecB; cd00557" /db_xref="CDD:29643" misc_feature order(198526..198528,198538..198540,198691..198693, 198697..198699) /locus_tag="B565_0169" /note="SecA binding site; other site" /db_xref="CDD:29643" misc_feature order(198688..198690,198694..198696,198700..198702, 198706..198708) /locus_tag="B565_0169" /note="Preprotein binding site; other site" /db_xref="CDD:29643" gene 198933..199937 /locus_tag="B565_0170" /db_xref="GeneID:10486087" CDS 198933..199937 /locus_tag="B565_0170" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate dehydrogenase" /protein_id="YP_004390822.1" /db_xref="GI:330827870" /db_xref="GeneID:10486087" /translation="MADQIAISVLGAGSYGSALAISLARNGHPTLLWGHDPVHVAELE QDRCNKAFLPDVPFPADLQLTADLQRAVQAAPVLLLVVPSHVFGDVLTRIKPFLRPDT RIAWATKGLEPDSGRLLQDVAREVLGDEIPLAVISGPTFAKELAAGLPTAISVASTHD EFADDLSHLLHCGRSFRVYTNPDFVGLQLGGAVKNVIAIGAGLSDGLGFGANARTALI TRGLVEMQRLGAALGADAKTFMGMAGLGDLVLTCTDNQSRNRRFGLALGAGKDVNTAM TEIGQVVEGYRNTKEVHLLAARCGVEMPICEQIFKVLYEGKNPKEAAIALLSRDKKDE " misc_feature 198951..199919 /locus_tag="B565_0170" /note="NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated; Region: gpsA; PRK00094" /db_xref="CDD:178859" misc_feature 198951..199421 /locus_tag="B565_0170" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 199476..199910 /locus_tag="B565_0170" /note="NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; Region: NAD_Gly3P_dh_C; pfam07479" /db_xref="CDD:116100" gene complement(200007..200585) /locus_tag="B565_0171" /db_xref="GeneID:10486088" CDS complement(200007..200585) /locus_tag="B565_0171" /codon_start=1 /transl_table=11 /product="Fe/S biogenesis protein nfuA" /protein_id="YP_004390823.1" /db_xref="GI:330827871" /db_xref="GeneID:10486088" /translation="MISISDAAQAHFRKLLEKQPDGTNIRVFVVNPGTQNAECGVSYC PPDAVDPEDQHLPFSGFDCMVDPLSAPFLVDATIDFVTDQMGSQLTLKAPNAKMRKVA DDAPLIERIEYVLMSEVNPMLAGHGGKVTLVELTEDKLAILQFGGGCNGCSMVDYTLK EGIEKQLLEKFPGELNGVKDATEHQRGDHSYY" misc_feature complement(200010..200585) /locus_tag="B565_0171" /note="Fe/S biogenesis protein NfuA; Provisional; Region: PRK11190" /db_xref="CDD:183027" misc_feature complement(200295..200585) /locus_tag="B565_0171" /note="Iron-sulphur cluster biosynthesis; Region: Fe-S_biosyn; cl00400" /db_xref="CDD:189093" misc_feature complement(200016..200294) /locus_tag="B565_0171" /note="NifU-like domain; Region: NifU; cl00484" /db_xref="CDD:153799" gene complement(200666..201394) /locus_tag="B565_0172" /db_xref="GeneID:10486089" CDS complement(200666..201394) /locus_tag="B565_0172" /codon_start=1 /transl_table=11 /product="Competence protein F" /protein_id="YP_004390824.1" /db_xref="GI:330827872" /db_xref="GeneID:10486089" /translation="MLKRLLAKASPLLGNHGDWQGSCLLCHQPCDNEPLLCSWCRQAL HQSQPRCHLCAAPLADYIEESIPVCGRCQRRPPPWERLQVIGDYQTPYPMLIPRLKYS GQILLAPLLARLLADHLDSREPPEAIIPVPLHWWRQWRRGFNQAEEIAQALGEFTGIP CDNTLLQRIKATPQQTTLSAGQRRRNLREAFRIRSHQYRHVALLDDVVTTGATAGQLS RLLHESGITKVEVWAICRTLRHSK" misc_feature complement(200681..201334) /locus_tag="B565_0172" /note="DNA utilization protein GntX; Provisional; Region: PRK11595" /db_xref="CDD:183221" misc_feature complement(200687..201286) /locus_tag="B565_0172" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene 201433..202197 /locus_tag="B565_0173" /db_xref="GeneID:10486090" CDS 201433..202197 /locus_tag="B565_0173" /codon_start=1 /transl_table=11 /product="carboxylesterase BioH" /protein_id="YP_004390825.1" /db_xref="GI:330827873" /db_xref="GeneID:10486090" /translation="MSISVEQFGQGPDLALLHGWGMNGAVWHGIAQQLAPHYRVHLVD LPGFGNSLLADEVDYSLPWLAEQVVAILPQKCHLLGWSLGGLVASQLALTHPDRLHSL ITVASSPCFMARDEWPGIAPKVLTGFNQMLAGDFRQTIERFLAIQAMGSEHARDDIRQ LRHWLAERPAPQFAALEAGLTLLADIDLREPLRELDLPWLRIYGRLDSLVPKAAIPLL DDLYPASRSVTLNKASHAPFISHPDEFIEIVRDFVG" misc_feature 201448..202179 /locus_tag="B565_0173" /note="carboxylesterase BioH; Provisional; Region: PRK10349" /db_xref="CDD:137836" misc_feature <201667..>201759 /locus_tag="B565_0173" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" gene 202269..202502 /locus_tag="B565_0174" /db_xref="GeneID:10486091" CDS 202269..202502 /locus_tag="B565_0174" /codon_start=1 /transl_table=11 /product="flagellar hook protein FlgE" /protein_id="YP_004390826.1" /db_xref="GI:330827874" /db_xref="GeneID:10486091" /translation="MRIDSAFNSGVQGFQRAEQIADKASNQIARLNTLSGDQVQVTDE LVNLKVAEQQAGASAKVVQTASDMMGTLIDIRV" misc_feature 202383..202493 /locus_tag="B565_0174" /note="Domain of unknown function (DUF1078); Region: DUF1078; pfam06429" /db_xref="CDD:191521" gene 202504..203271 /locus_tag="B565_0175" /db_xref="GeneID:10486092" CDS 202504..203271 /locus_tag="B565_0175" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390827.1" /db_xref="GI:330827875" /db_xref="GeneID:10486092" /translation="MNINVSLPPLIPTQLQPQVEAARTDNRRAELIPQARAGQASVAE SEVGSQKEKSKVGQASSNQTSQNSRETGQLAPTTLPDNRFVEATGEDGQRKQQDPKQQ EQQQRQEQQVQDLVERDKEVRTHEQAHQSAGGEYASSPTYQFTQGPDGKRYATGGEVQ IDTSVVPGDPAATIAKMQQIRAAALAPAEPSAQDLAVARSAAASEAKARKELMAEQSA KSGGVLSAYMDKRNSVIAGHYRQAVSPASTQSLSLHI" misc_feature 202561..203157 /locus_tag="B565_0175" /note="SprA-related family; Region: SprA-related; pfam12118" /db_xref="CDD:152553" gene 203357..203635 /locus_tag="B565_0176" /db_xref="GeneID:10486093" CDS 203357..203635 /locus_tag="B565_0176" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390828.1" /db_xref="GI:330827876" /db_xref="GeneID:10486093" /translation="MHFDEVKAEDFTTFSRVPPPHLQMEQFLMQLGGGGTEGTSFKKK VMLAAGWSHTGVVSYGKYPQEACKAFNRLREVLAQHGEPESILAALTQ" gene complement(203705..206062) /locus_tag="B565_0177" /db_xref="GeneID:10486094" CDS complement(203705..206062) /locus_tag="B565_0177" /codon_start=1 /transl_table=11 /product="paral putative RNase R" /protein_id="YP_004390829.1" /db_xref="GI:330827877" /db_xref="GeneID:10486094" /translation="MAPDGADSTTEALNNIMMQTIERQIAGELHARPEQVQAAVRLLD EGSTVPFIARYRKEVTGGLDDSQLRTLESRLGYLRELEDRRQVIIRSIEEQGKLTPEL MRELNGADSKTRLEDLYLPYKPKRRTKGQMAIEAGLEPLANLLLSDPMQDPEQAAAAF LNPEQGIADNKAALDGARYILMERFAEQADLLEKLRDYLWQNATLRARVVAGKEQEGA KFKDYFEHDEPLHKAPSHRVLAMLRGRNEGILNLALVTGDDESASPCEGIIAHHLKLN LQNRPADKWLQGVVSWTWKIKLSLQMETELIGRIRESAEEEAIKVFAMNLKDLLMAAP AGMRCTMGLDPGIRTGVKVAVVDATGKLVDHATIYPFEPKRQIDQSLKTLSELCQKHK VELISIGNGTASRETDRLVSDLFERYPAAKAQKIVVSEAGASVYSASELASQEFPDLD VSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVGQSQLARRLDAVVEDCVNAVG VDVNTASVALLNRVSGLSQTLAQNIVAYRDEHGAFKSRQQLLKVSRLGPKAFEQCAGF LRIRGGNNPLDSSAVHPESYPVVERILAKLEQTVESLLGNSSLLRSLKPADYTDEQFG VPTVTDIIGELDKPGRDPRPEFKTATFKEGVEQISDLVPEMVLEGVVTNVTNFGAFVD IGVHQDGLVHISSLTDRFVKDPREVVKAGDIVRVKVLEVDAPRKRISLTMRLDEKAGQ PARKPAEARNSSAGNTKPRNEPRQSPPMGGAMGNAFAAALSKAKK" misc_feature complement(203708..206023) /locus_tag="B565_0177" /note="Transcriptional accessory protein [Transcription]; Region: Tex; COG2183" /db_xref="CDD:32366" misc_feature complement(205412..205990) /locus_tag="B565_0177" /note="Tex-like protein N-terminal domain; Region: Tex_N; pfam09371" /db_xref="CDD:150144" misc_feature complement(204752..205045) /locus_tag="B565_0177" /note="Uncharacterised protein family (UPF0081); Region: UPF0081; cl00525" /db_xref="CDD:186059" misc_feature complement(203870..204070) /locus_tag="B565_0177" /note="S1_Tex: The C-terminal S1 domain of a transcription accessory factor called Tex, which has been characterized in Bordetella pertussis and Pseudomonas aeruginosa. The tex gene is essential in Bortella pertusis and is named for its role in toxin...; Region: S1_Tex; cd05685" /db_xref="CDD:88440" misc_feature complement(order(203987..203989,203993..203995, 204023..204025,204047..204049)) /locus_tag="B565_0177" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88440" gene complement(206216..206689) /locus_tag="B565_0178" /db_xref="GeneID:10486095" CDS complement(206216..206689) /locus_tag="B565_0178" /codon_start=1 /transl_table=11 /product="transcription elongation factor GreB" /protein_id="YP_004390830.1" /db_xref="GI:330827878" /db_xref="GeneID:10486095" /translation="MKTKLITREGYNKLKEELDFLWRQERPEVTRKVAWAASLGDRSE NADYQYNKKRLREIDRRVRYLRKCLEELGIVDYAPAQEGKVFFGAWVEVENEEGETKR FRIVGYDEIFERKDYISIDSPMARALLKKEVGDEAIVRTPVGDVCWYINEISYPK" misc_feature complement(206222..206689) /locus_tag="B565_0178" /note="transcription elongation factor GreB; Reviewed; Region: greB; PRK01885" /db_xref="CDD:179345" misc_feature complement(206480..206674) /locus_tag="B565_0178" /note="domain; Region: GreA_GreB_N; pfam03449" /db_xref="CDD:190636" misc_feature complement(206225..206452) /locus_tag="B565_0178" /note="C-term; Region: GreA_GreB; pfam01272" /db_xref="CDD:189919" gene 206939..207661 /locus_tag="B565_0179" /db_xref="GeneID:10486096" CDS 206939..207661 /locus_tag="B565_0179" /codon_start=1 /transl_table=11 /product="winged helix family two component transcriptional regulator" /protein_id="YP_004390831.1" /db_xref="GI:330827879" /db_xref="GeneID:10486096" /translation="MSQQQYKVLVVDDDLKLRSLLERYLTEQGFVVRGVANGEQADRL LTRENFSLMVLDLMLPGEDGLSICRRLREAGNQIPVLMLTAKGDEVDRIVGLEMGADD YLPKPFNPRELLARIRAVLRRHTVELPGAPSAAEKVVNFGAFQLNLATRELSRDGEPM ALTSGEFAVLKVLVSHPREPLSRDKLMNLARGREYTATERSIDVQVSRLRRLLEQDPA QPRYLQTVWGLGYVFVPDGDGA" misc_feature 206939..207649 /locus_tag="B565_0179" /note="osmolarity response regulator; Provisional; Region: ompR; PRK09468" /db_xref="CDD:181883" misc_feature 206963..207301 /locus_tag="B565_0179" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(206972..206977,207104..207106,207128..207130, 207188..207190,207245..207247,207254..207259) /locus_tag="B565_0179" /note="active site" /db_xref="CDD:29071" misc_feature 207104..207106 /locus_tag="B565_0179" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(207113..207118,207122..207130) /locus_tag="B565_0179" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 207254..207262 /locus_tag="B565_0179" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 207353..207637 /locus_tag="B565_0179" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cd00383" /db_xref="CDD:29475" misc_feature order(207425..207427,207482..207487,207539..207541, 207548..207550,207572..207577,207611..207613, 207626..207628) /locus_tag="B565_0179" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29475" gene 207658..208968 /locus_tag="B565_0180" /db_xref="GeneID:10486097" CDS 207658..208968 /locus_tag="B565_0180" /codon_start=1 /transl_table=11 /product="two-component system osmolarity sensor histidine kinase EnvZ" /protein_id="YP_004390832.1" /db_xref="GI:330827880" /db_xref="GeneID:10486097" /translation="MKKVGSMFSRMLWFLAAVLVVYQAVSYVTFYNYLLAPTVKQISH LLANQVKLIFPVNTEQLALSEDAEALVYVTTGTDIYTQSEAVQHGFNDAKPYPYLEEN ISRELGGPAKVRVEIQDHYIIWIQPPQASKIWVRIPLTEIEDDDIEPLIIYLSVLLVI TLFAAWRFARQLVRPLEDLEAGAVAVARGHFPEALGELGSREVRRLTRTFNHMSHSIK SLIEERNLMMAGVSHDLRTPLTRIRLATEMMSSGDEYLKESINADIDESNAIIDQFID YIRPDEGLDLEPIDLTQLVHDTLLIYSEQGLEVDLALPQEAVRVACNPVSIRRVLNNL SSNSQRYGASRLHAELKDDGHWVRLRLSDDGPGIPEQDYSRVLKPFTQGNVARTVGGS GLGLAIVAKIVAQHHGTIRLGSSDLGGLLVEMRLPKHQPQEWMD" misc_feature 207673..208938 /locus_tag="B565_0180" /note="osmolarity sensor protein; Provisional; Region: envZ; PRK09467" /db_xref="CDD:181882" misc_feature 208117..208314 /locus_tag="B565_0180" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 208318..208494 /locus_tag="B565_0180" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature order(208336..208338,208348..208350,208360..208362, 208369..208371,208381..208383,208390..208392, 208420..208422,208435..208437,208444..208446, 208456..208458,208465..208467,208477..208479) /locus_tag="B565_0180" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature 208354..208356 /locus_tag="B565_0180" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature 208636..208935 /locus_tag="B565_0180" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(208654..208656,208666..208668,208675..208677, 208738..208740,208744..208746,208750..208752, 208756..208761,208834..208845,208891..208893, 208897..208899,208912..208917,208921..208923) /locus_tag="B565_0180" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 208666..208668 /locus_tag="B565_0180" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(208750..208752,208756..208758,208834..208836, 208840..208842) /locus_tag="B565_0180" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(209006..209920) /locus_tag="B565_0181" /db_xref="GeneID:10486098" CDS complement(209006..209920) /locus_tag="B565_0181" /codon_start=1 /transl_table=11 /product="drug/metabolite family transporter" /protein_id="YP_004390833.1" /db_xref="GI:330827881" /db_xref="GeneID:10486098" /translation="MLKDQKKAYQYGLCAVALWSTVATAFKISLAYFEPVQLLLVAAF TSTLTLTAVVAKQGKLPLLGSYIKARPFYYLTLGVLNPFLYYLLLFKAYDLLPAQQAQ TLNYTWAITLSLLAVPFLGQKLRRRDGVAIVLGYFGALVIATRGDVFGLQFDSPLGVT LALVSTLIWASYWILNTRNQGDPIVSLLLGFMISLPFIVVATWLLSDFAMTAWQGWAG AIYVGLFEMGFGFVLWLMALRHATNTAPISNLIFISPFASLVLLNLLIGEAIHPATPI GLALIVAALLIQQLKYGKRYRASVETKS" misc_feature complement(209090..209920) /locus_tag="B565_0181" /note="Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:31041" misc_feature complement(209489..209869) /locus_tag="B565_0181" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" misc_feature complement(209090..209422) /locus_tag="B565_0181" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene 210277..210588 /locus_tag="B565_0182" /db_xref="GeneID:10486099" CDS 210277..210588 /locus_tag="B565_0182" /codon_start=1 /transl_table=11 /product="ribosomal protein S10" /protein_id="YP_004390834.1" /db_xref="GI:330827882" /db_xref="GeneID:10486099" /translation="MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPT RKERFTVLISPHVNKDARDQYEIRTHKRLVDIVEPTDKTVDALMRLDLAAGVDVQISL G" misc_feature 210277..210582 /locus_tag="B565_0182" /note="Ribosomal protein S10p/S20e; Region: Ribosomal_S10; cl00314" /db_xref="CDD:193763" gene 210611..211243 /locus_tag="B565_0183" /db_xref="GeneID:10486100" CDS 210611..211243 /locus_tag="B565_0183" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L3" /protein_id="YP_004390835.1" /db_xref="GI:330827883" /db_xref="GeneID:10486100" /translation="MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETD GYNAIQVTTGAKKASRVTKPEAGHFAKAGVEAGRGLWEFRLNNGETFTVGSELKVDLL ADVKLVDVTGTSKGKGFAGTVKRHNFRTQDMTHGNSLSHRVPGSIGQNQTPGRVFKGK KMAGHMGAERVTTQNLELVRVDAERNLLLIKGAVPGATNGNVIVKPAVKA" misc_feature 210611..211240 /locus_tag="B565_0183" /note="Ribosomal protein L3; Region: Ribosomal_L3; cl00324" /db_xref="CDD:189082" gene 211261..211866 /locus_tag="B565_0184" /db_xref="GeneID:10486101" CDS 211261..211866 /locus_tag="B565_0184" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L4" /protein_id="YP_004390836.1" /db_xref="GI:330827884" /db_xref="GeneID:10486101" /translation="MELVMKDAKSALEVSETTFGREFNEALVHQVVVAYAAGARQGTR AQLTRSEVSGGGKKPWRQKGTGRARAGSIRSPIWRSGGVTFAAKPQDHSQKVNKKMYR GAIRSILSELVRQERLIVVEKFGIEAPKTKELIAKLKEMELTDVLIVTAEVDENLFLA ARNLYKVDVRDVAGIDPVSLIAFDKVLMTADAVKQIEEMLA" misc_feature 211261..211863 /locus_tag="B565_0184" /note="Ribosomal protein L4/L1 family; Region: Ribosomal_L4; cl00325" /db_xref="CDD:197406" gene 211863..212165 /locus_tag="B565_0185" /db_xref="GeneID:10486102" CDS 211863..212165 /locus_tag="B565_0185" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L23" /protein_id="YP_004390837.1" /db_xref="GI:330827885" /db_xref="GeneID:10486102" /translation="MIREERLLKVLKAPHISEKSTMVAEKQNTIVFKVAVDATKAEVK AAVAKLFEVEVETVRTLNMKGKTKRAGARVGRRSDWKKAYVTLKAGQDIDFMGAAE" misc_feature 211884..212159 /locus_tag="B565_0185" /note="Ribosomal protein L23; Region: Ribosomal_L23; cl00326" /db_xref="CDD:185908" gene 212181..213002 /locus_tag="B565_0186" /db_xref="GeneID:10486103" CDS 212181..213002 /locus_tag="B565_0186" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L2" /protein_id="YP_004390838.1" /db_xref="GI:330827886" /db_xref="GeneID:10486103" /translation="MAIVKCKPTSPGRRHVVKIVNQELYKGKPFAALLDSKSKSGGRN NNGRITTRHIGGGHKQHYRIVDFKRDKDGIPAKVERLEYDPNRTANIALVLYADGERR YILAPKGLKAGDAIASGADAAIKVGNALPMRNIPVGSTVHAVEMKPGKGAQLARSAGT FIQILAREGNYVTLRLRSGEVRKVLAECRATIGEVGNSEHMLRQLGKAGANRWRGIRP TVRGMAMNPVDHPHGGGEGRNKGMQPVSPWGQKAKGFKTRKNKRTDKYIVRRRNK" misc_feature 212181..212999 /locus_tag="B565_0186" /note="50S ribosomal protein L2; Validated; Region: rplB; PRK09374" /db_xref="CDD:181807" misc_feature 212304..212510 /locus_tag="B565_0186" /note="Ribosomal Proteins L2, RNA binding domain; Region: Ribosomal_L2; pfam00181" /db_xref="CDD:109247" misc_feature 212556..212930 /locus_tag="B565_0186" /note="Ribosomal Proteins L2, C-terminal domain; Region: Ribosomal_L2_C; pfam03947" /db_xref="CDD:146530" gene 213025..213303 /locus_tag="B565_0187" /db_xref="GeneID:10486104" CDS 213025..213303 /locus_tag="B565_0187" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S19" /protein_id="YP_004390839.1" /db_xref="GI:330827887" /db_xref="GeneID:10486104" /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPVKTWSRRSMIIPNM IGLTIAVHNGRQHVPVFVTEEMIGHKLGEFAPTRTYRGHAADKKAKKR" misc_feature 213025..213300 /locus_tag="B565_0187" /note="Ribosomal protein S19; Region: Ribosomal_S19; cl00350" /db_xref="CDD:185929" gene 213314..213658 /locus_tag="B565_0188" /db_xref="GeneID:10486105" CDS 213314..213658 /locus_tag="B565_0188" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L22" /protein_id="YP_004390840.1" /db_xref="GI:330827888" /db_xref="GeneID:10486105" /translation="MEAIAKHRYARTSAQKARLVADQVRGLSVDKALNILTFSPKKAA VLVKKVLESAIANAEHNEGADIDALRVATIMVDEGPSMKRIRPRAKGRADRILKRTAH ITVVVSDAKAGR" misc_feature 213320..213634 /locus_tag="B565_0188" /note="Ribosomal protein L22/L17e. L22 (L17 in eukaryotes) is a core protein of the large ribosomal subunit. It is the only ribosomal protein that interacts with all six domains of 23S rRNA, and is one of the proteins important for directing the proper...; Region: Ribosomal_L22; cd00336" /db_xref="CDD:48343" misc_feature order(213320..213325,213389..213397,213401..213406, 213410..213415,213476..213493,213518..213535, 213629..213634) /locus_tag="B565_0188" /note="putative translocon binding site; other site" /db_xref="CDD:48343" misc_feature order(213329..213331,213335..213337,213344..213346, 213350..213358,213365..213367,213377..213379, 213386..213388,213470..213472,213482..213484, 213491..213493,213530..213532,213536..213544, 213548..213550,213557..213559,213593..213610) /locus_tag="B565_0188" /note="protein-rRNA interface [nucleotide binding]; other site" /db_xref="CDD:48343" gene 213662..214375 /locus_tag="B565_0189" /db_xref="GeneID:10486106" CDS 213662..214375 /locus_tag="B565_0189" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S3" /protein_id="YP_004390841.1" /db_xref="GI:330827889" /db_xref="GeneID:10486106" /translation="MGQKVHPNGIRLGITKPWNSTWFANTKDFADNLYSDFQVRQFLT KELKNASLSKITIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRKAVATIAGVPAQIN ISEVRKPELDGKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA EIARTEWYREGRVPLHTLRADIDYATSEAHTTYGVIGVKVWIFKGEVLGGLAAVNAAA AQEQAPAKPKRDNKRRAAK" misc_feature 213662..214276 /locus_tag="B565_0189" /note="ribosomal protein S3, bacterial type; Region: rpsC_bact; TIGR01009" /db_xref="CDD:130082" misc_feature 213665..213988 /locus_tag="B565_0189" /note="K homology RNA-binding (KH) domain of the prokaryotic 30S small ribosomal subunit protein S3. S3 is part of the head region of the 30S ribosomal subunit and is believed to interact with mRNA as it threads its way from the latch into the channel. The...; Region: 30S_S3_KH; cd02412" /db_xref="CDD:48410" misc_feature 213893..213904 /locus_tag="B565_0189" /note="G-X-X-G motif; other site" /db_xref="CDD:48410" misc_feature 214016..214267 /locus_tag="B565_0189" /note="Ribosomal protein S3, C-terminal domain; Region: Ribosomal_S3_C; pfam00189" /db_xref="CDD:189441" gene 214389..214802 /locus_tag="B565_0190" /db_xref="GeneID:10486107" CDS 214389..214802 /locus_tag="B565_0190" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L16" /protein_id="YP_004390842.1" /db_xref="GI:330827890" /db_xref="GeneID:10486107" /translation="MLQPKRTKFRKTHKGRNRGLATSGNEVSFGTFGLKATSRGQLTA RQIEAARRAMTRHVKRQGKIWIRVFPDKPITEKPLEVRMGKGKGNVEYWVCPIQPGKV LYEMDGVPEALAREAFALAAAKLSVQTTFVIKTVM" misc_feature 214458..>214718 /locus_tag="B565_0190" /note="Ribosomal_L16_L10e: L16 is an essential protein in the large ribosomal subunit of bacteria, mitochondria, and chloroplasts. Large subunits that lack L16 are defective in peptidyl transferase activity, peptidyl-tRNA hydrolysis activity, association with...; Region: Ribosomal_L16_L10e; cd01433" /db_xref="CDD:88606" misc_feature order(214461..214466,214473..214475,214521..214526, 214533..214535,214542..214544,214554..214556, 214563..214565,214581..214589,214593..214595, 214599..214601,214611..214616,214635..214649, 214689..214691) /locus_tag="B565_0190" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88606" misc_feature 214500..214505 /locus_tag="B565_0190" /note="5S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88606" misc_feature order(214536..214544,214551..214556) /locus_tag="B565_0190" /note="putative antibiotic binding site [chemical binding]; other site" /db_xref="CDD:88606" misc_feature order(214563..214565,214572..214577,214581..214583, 214707..214709) /locus_tag="B565_0190" /note="L25 interface [polypeptide binding]; other site" /db_xref="CDD:88606" misc_feature order(214629..214634,214641..214646) /locus_tag="B565_0190" /note="L27 interface [polypeptide binding]; other site" /db_xref="CDD:88606" gene 214802..214993 /locus_tag="B565_0191" /db_xref="GeneID:10486108" CDS 214802..214993 /locus_tag="B565_0191" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L29" /protein_id="YP_004390843.1" /db_xref="GI:330827891" /db_xref="GeneID:10486108" /translation="MKAQDLRQKSVEELNQELLGLLREQFNMRMQASTGQLAQTHTLK QVRRDVARIKTVLTEKAGA" misc_feature 214811..214981 /locus_tag="B565_0191" /note="Ribosomal L29 protein/HIP. L29 is a protein of the large ribosomal Subunit. A homolog, called heparin/heparan sulfate interacting protein (HIP), has also been identified in mammals. L29 is located on the surface of the large ribosomal subunit, where...; Region: Ribosomal_L29_HIP; cd00427" /db_xref="CDD:88602" misc_feature order(214811..214813,214820..214822,214922..214924, 214952..214957,214961..214966,214976..214978) /locus_tag="B565_0191" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88602" misc_feature order(214811..214819,214823..214825,214835..214840, 214844..214849,214856..214861,214868..214873, 214880..214882,214889..214894,214916..214918, 214925..214927,214937..214939,214946..214951, 214958..214963,214970..214972) /locus_tag="B565_0191" /note="putative translocon interaction site; other site" /db_xref="CDD:88602" misc_feature order(214859..214861,214871..214873,214880..214882, 214892..214894,214937..214939) /locus_tag="B565_0191" /note="signal recognition particle (SRP54) interaction site; other site" /db_xref="CDD:88602" misc_feature order(214877..214879,214886..214891) /locus_tag="B565_0191" /note="L23 interface [polypeptide binding]; other site" /db_xref="CDD:88602" misc_feature 214898..214903 /locus_tag="B565_0191" /note="trigger factor interaction site; other site" /db_xref="CDD:88602" gene 214993..215241 /locus_tag="B565_0192" /db_xref="GeneID:10486109" CDS 214993..215241 /locus_tag="B565_0192" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S17" /protein_id="YP_004390844.1" /db_xref="GI:330827892" /db_xref="GeneID:10486109" /translation="MTDKIRTLQGRVISDKMDKSITVAIERKVKHPIYGKIIKRTTKL HVHDENNECKAGDLVEIRECRPLSKTKSWTLVAVVEKA" misc_feature 214993..215238 /locus_tag="B565_0192" /note="Ribosomal protein S17; Region: Ribosomal_S17; cl00351" /db_xref="CDD:189087" gene 215389..215757 /locus_tag="B565_0193" /db_xref="GeneID:10486110" CDS 215389..215757 /locus_tag="B565_0193" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L14" /protein_id="YP_004390845.1" /db_xref="GI:330827893" /db_xref="GeneID:10486110" /translation="MIQMQSMLGVADNSGARSVMCIKVLGGSHRRYAGIGDIIKVSIK EAIPRGKVKKGDVYNAVVVRTRKGVRRPDGSVIRFDNNAAVLLNNNQQPIGTRIFGPV TRELRNEKFMKIVSLAPEVL" misc_feature 215389..215754 /locus_tag="B565_0193" /note="Ribosomal protein L14p/L23e; Region: Ribosomal_L14; cl00328" /db_xref="CDD:193771" gene 215769..216086 /locus_tag="B565_0194" /db_xref="GeneID:10486111" CDS 215769..216086 /locus_tag="B565_0194" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L24" /protein_id="YP_004390846.1" /db_xref="GI:330827894" /db_xref="GeneID:10486111" /translation="MAAKIRREDEVIVLTGKDKGKRGKVTQVLIAKGKVIVEGINQVK KHQKPVPALGQAGGIVTKEAPIDVSNVALFNSATGKADRVGFRIEDGKKVRFFKSTGE LVK" misc_feature 215769..216083 /locus_tag="B565_0194" /note="KOW motif; Region: KOW; cl00354" /db_xref="CDD:185933" gene 216100..216639 /locus_tag="B565_0195" /db_xref="GeneID:10486112" CDS 216100..216639 /locus_tag="B565_0195" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L5" /protein_id="YP_004390847.1" /db_xref="GI:330827895" /db_xref="GeneID:10486112" /translation="MAKLHDYYKSDVVNELSKQFGYKTIMQVPRIEKITLNMGVGEAI SDKKLLENAAADMAAISGQKPLITKARKSVAGFKIREGYPIGCKVTLRGERMWEFLER LICISVPRIRDFRGLNAKAFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTSA NTDEEGRALLAAFNFPFRK" misc_feature 216100..216636 /locus_tag="B565_0195" /note="50S ribosomal protein L5; Validated; Region: rplE; PRK00010" /db_xref="CDD:178791" misc_feature 216172..216339 /locus_tag="B565_0195" /note="Ribosomal protein L5; Region: Ribosomal_L5; pfam00281" /db_xref="CDD:109342" misc_feature 216349..216633 /locus_tag="B565_0195" /note="ribosomal L5P family C-terminus; Region: Ribosomal_L5_C; pfam00673" /db_xref="CDD:144317" gene 216650..216955 /locus_tag="B565_0196" /db_xref="GeneID:10486113" CDS 216650..216955 /locus_tag="B565_0196" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S14" /protein_id="YP_004390848.1" /db_xref="GI:330827896" /db_xref="GeneID:10486113" /translation="MAKTSMKAREAKRAKLVAKYATKRAELKAIIVDMNASEEARWDA VLQLQQLPRDSSPSRQRNRCNITGRPHGFLRKFGLSRIKVREHAMKGEIPGLKKASW" misc_feature 216650..216952 /locus_tag="B565_0196" /note="Ribosomal protein S14p/S29e; Region: Ribosomal_S14; cl00355" /db_xref="CDD:193782" gene 216977..217369 /locus_tag="B565_0197" /db_xref="GeneID:10486114" CDS 216977..217369 /locus_tag="B565_0197" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S8" /protein_id="YP_004390849.1" /db_xref="GI:330827897" /db_xref="GeneID:10486114" /translation="MSMQDPIADMLTRIRNGQAASKVAVSMPSSKLKVAIAKVLKEEG YIAGYSVAGDVKPELEIELKYFQGKPVVELIQRVSRPGLRIYKRTTDLPKVMGGLGVA IVSTSKGVMTDRAARKASMGGEIICYVA" misc_feature 216980..217366 /locus_tag="B565_0197" /note="Ribosomal protein S8; Region: Ribosomal_S8; cl00330" /db_xref="CDD:185911" gene 217383..217916 /locus_tag="B565_0198" /db_xref="GeneID:10486115" CDS 217383..217916 /locus_tag="B565_0198" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L6" /protein_id="YP_004390850.1" /db_xref="GI:330827898" /db_xref="GeneID:10486115" /translation="MSRVAKAPVTIPAGVEVTLNGQELTIKGGKGSLVRSIHAGVEVT KEDNVLKFAPRGSIAGADAQAGTARALVNNMVIGVTQGFERKLQLVGVGYKASIKGNA VALALGFSHPVEHALPAGVTAECPTATEIVLRGVDKQLVGQVAADIRAYRAPEPYKGK GVRYANEQVRTKEAKKK" misc_feature 217383..217913 /locus_tag="B565_0198" /note="50S ribosomal protein L6; Validated; Region: rplF; PRK05498" /db_xref="CDD:180118" misc_feature 217413..217628 /locus_tag="B565_0198" /note="Ribosomal protein L6; Region: Ribosomal_L6; pfam00347" /db_xref="CDD:109407" misc_feature 217650..217874 /locus_tag="B565_0198" /note="Ribosomal protein L6; Region: Ribosomal_L6; pfam00347" /db_xref="CDD:109407" gene 217977..218279 /locus_tag="B565_0199" /db_xref="GeneID:10486116" CDS 217977..218279 /locus_tag="B565_0199" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L18" /protein_id="YP_004390851.1" /db_xref="GI:330827899" /db_xref="GeneID:10486116" /translation="MQELGATRLVVHRTPRHIYAQVIAANGSEVLASASTVEKAISEA LKYTGNADAATAVGKAIAERAIAKGVQNVSFDRSGFKYHGRIAALAAAARDAGLQF" misc_feature 217998..218234 /locus_tag="B565_0199" /note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA...; Region: Ribosomal_L18_L5e; cd00432" /db_xref="CDD:88603" misc_feature order(217998..218000,218010..218027,218031..218033, 218037..218039,218058..218066,218073..218075, 218196..218198,218229..218231) /locus_tag="B565_0199" /note="5S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88603" misc_feature 218214..218216 /locus_tag="B565_0199" /note="L5 interface [polypeptide binding]; other site" /db_xref="CDD:88603" gene 218384..218794 /locus_tag="B565_0200" /db_xref="GeneID:10486117" CDS 218384..218794 /locus_tag="B565_0200" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S5" /protein_id="YP_004390852.1" /db_xref="GI:330827900" /db_xref="GeneID:10486117" /translation="MSFTALTVVGDGNGRVGYGYGKAREVPAAIQKAMEQAKRNLNKV ELNNGTLHHPVRGVHSGSTVFMKPASQGTGIIAGGAMRAVLEVAGIHNVLAKTYGSTN PINVVRATVDALVHGQSPEQIAAKRGLRVEEILG" misc_feature <218387..218521 /locus_tag="B565_0200" /note="Ribosomal protein S5, N-terminal domain; Region: Ribosomal_S5; pfam00333" /db_xref="CDD:144065" misc_feature 218546..218767 /locus_tag="B565_0200" /note="Ribosomal protein S5, C-terminal domain; Region: Ribosomal_S5_C; pfam03719" /db_xref="CDD:190724" gene 218801..218980 /locus_tag="B565_0201" /db_xref="GeneID:10486118" CDS 218801..218980 /locus_tag="B565_0201" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L30" /protein_id="YP_004390853.1" /db_xref="GI:330827901" /db_xref="GeneID:10486118" /translation="MANTVKVTQTRSSIGRLPKHKATLRGLGLRRIGHTVELEDTPCV RGMINQVYYMVKVEG" misc_feature 218813..218974 /locus_tag="B565_0201" /note="Ribosomal protein L30, which is found in eukaryotes and prokaryotes but not in archaea, is one of the smallest ribosomal proteins with a molecular mass of about 7kDa. L30 binds the 23SrRNA as well as the 5S rRNA and is one of five ribosomal proteins...; Region: Ribosomal_L30; cd01658" /db_xref="CDD:100100" misc_feature order(218831..218836,218840..218845,218849..218857, 218864..218869,218876..218884,218888..218890, 218897..218899,218912..218917,218924..218932, 218936..218941) /locus_tag="B565_0201" /note="23S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:100100" gene 218983..219420 /locus_tag="B565_0202" /db_xref="GeneID:10486119" CDS 218983..219420 /locus_tag="B565_0202" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L15" /protein_id="YP_004390854.1" /db_xref="GI:330827902" /db_xref="GeneID:10486119" /translation="MRLNTLSPAAGSKPEKQRRGRGIGSGLGKTGGRGVKGQTSRSGG GKVRNGFEGGQMPLKIRLPKFGFFSRKSLVSAEVRLNEIALVEGDVVDLSTLKQAGVV TKNIVFAKVVLSGNIDRAVTVRGLSVTKGARAAIEAAGGKIEE" misc_feature 218983..219369 /locus_tag="B565_0202" /note="Ribosomal protein L18e/L15; Region: Ribosomal_L18e; cl12022" /db_xref="CDD:196303" gene 219429..220757 /locus_tag="B565_0203" /db_xref="GeneID:10486120" CDS 219429..220757 /locus_tag="B565_0203" /codon_start=1 /transl_table=11 /product="Preprotein translocase subunit secY" /protein_id="YP_004390855.1" /db_xref="GI:330827903" /db_xref="GeneID:10486120" /translation="MAKKPGLDVKAQGGLSELKSRLLFVLGAIIVFRAGSYVPIPGID AAVLAELFQQQKGTIIEMFNMFSGGALSRASILALGIMPYISASIIIQLLTVVHPALA ELKKEGESGRRKISQYTRWGTLVLGTFQAIGIATGLPNMMHGLVTNPGLGFYFTAVVS LVTGTMFLMWLGEQITERGIGNGISLIIFTGIVAGLPHAIGATAEQARQGELHILLLL LLGLIVFAVTYFVVFVERGQRRIVVNYAKRQQGRQVFAAQSTHLPLKVNMAGVIPAIF ASSIILFPGTITSWFGQGEGKVADILQQVSMVLQPGQPLYEMLYAAAIIFFCFFYTAL VFNPRETADNLKKSGAFIPGIRPGEQTARYIDKVMTRLTLAGALYITFICLVPQFLMT AWNVQFYFGGTSLLIIVVVIMDFMAQVQTHMMSHQYGDVLRKANLKGYGR" misc_feature 219468..220712 /locus_tag="B565_0203" /note="preprotein translocase subunit SecY; Reviewed; Region: secY; PRK09204" /db_xref="CDD:181698" misc_feature 219651..220676 /locus_tag="B565_0203" /note="SecY translocase; Region: SecY; pfam00344" /db_xref="CDD:189510" gene 221038..221394 /locus_tag="B565_0204" /db_xref="GeneID:10486121" CDS 221038..221394 /locus_tag="B565_0204" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S13" /protein_id="YP_004390856.1" /db_xref="GI:330827904" /db_xref="GeneID:10486121" /translation="MARIAGINIPDHKHAVIALTAIYGVGRTRSKAICAAAGIAENVK IKDLDEAQIESLREQVGKFTVEGDLRRQISMNIKRLMDLGCYRGLRHRRSLPVRGQRT KTNARTRKGPRKAIKK" misc_feature 221038..221391 /locus_tag="B565_0204" /note="Ribosomal protein S13/S18; Region: Ribosomal_S13; cl00331" /db_xref="CDD:185912" misc_feature 221038..221391 /locus_tag="B565_0204" /note="Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]; Region: RpsM; COG0099" /db_xref="CDD:30448" gene 221625..221798 /locus_tag="B565_0205" /db_xref="GeneID:10486122" CDS 221625..221798 /locus_tag="B565_0205" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S11" /protein_id="YP_004390857.1" /db_xref="GI:330827905" /db_xref="GeneID:10486122" /translation="MAKEYGVKNLEVMVKGPGPGRESSIRALNAAGFRITNITDVTPI PHNGCRPPKKRRV" misc_feature <221625..221795 /locus_tag="B565_0205" /note="Ribosomal protein S11; Region: Ribosomal_S11; cl00332" /db_xref="CDD:193772" gene 221838..222458 /locus_tag="B565_0206" /db_xref="GeneID:10486123" CDS 221838..222458 /locus_tag="B565_0206" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S4" /protein_id="YP_004390858.1" /db_xref="GI:330827906" /db_xref="GeneID:10486123" /translation="MARYIGPKLKLSRREGTDLFLKSGVRAIDSKCKIDTAPGQHGAR KARLSDYGVQLREKQKVRRIYGVLEKQFRNYYRDAARQKGNTGENLLQLLEGRLDNVV YRMGFGATRAESRQLVSHKAIMVNGRVVNIPSFQVSPEDVICVREKAKKQARIKASLE VAGQREKPTWVEVDAAKMEGAFKRLPERSDLSADINEQLIVELYSK" misc_feature 221838..222455 /locus_tag="B565_0206" /note="30S ribosomal protein S4; Validated; Region: rpsD; PRK05327" /db_xref="CDD:180018" misc_feature 221841..222122 /locus_tag="B565_0206" /note="Ribosomal protein S4/S9 N-terminal domain; Region: Ribosomal_S4; pfam00163" /db_xref="CDD:143931" misc_feature 222126..222305 /locus_tag="B565_0206" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cd00165" /db_xref="CDD:29105" misc_feature order(222126..222128,222162..222167,222171..222176, 222180..222185,222192..222197,222201..222203, 222222..222245,222249..222251) /locus_tag="B565_0206" /note="RNA binding surface [nucleotide binding]; other site" /db_xref="CDD:29105" gene 222559..223473 /locus_tag="B565_0207" /db_xref="GeneID:10486124" CDS 222559..223473 /locus_tag="B565_0207" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit alpha" /protein_id="YP_004390859.1" /db_xref="GI:330827907" /db_xref="GeneID:10486124" /translation="MTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYS SKEGVQEDILEILLNLKGIAVKLEGKDEVTLSLTKSGTGPVTAGDITYGDEVEIVNPE HVICHLTGANAEISMRLKVQRGRGYVPASARVHNDDEERPIGRLLLDSAFSPIVRIAY NVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRSATILAEQLEAFVDLRDVSVPEKK EEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLT EIKDVLASRGLSLGMRLENWPPASIADE" misc_feature 222562..223431 /locus_tag="B565_0207" /note="DNA-directed RNA polymerase subunit alpha; Provisional; Region: PRK05182" /db_xref="CDD:179956" misc_feature 222565..223176 /locus_tag="B565_0207" /note="N-terminal domain of the Alpha subunit of Bacterial RNA polymerase; Region: RNAP_alpha_NTD; cd06928" /db_xref="CDD:132904" misc_feature order(222565..222567,222574..222576,222580..222588, 222595..222597,222607..222609,222616..222621, 222631..222633,223144..223146,223153..223158, 223162..223167,223171..223176) /locus_tag="B565_0207" /note="alphaNTD homodimer interface [polypeptide binding]; other site" /db_xref="CDD:132904" misc_feature order(222592..222594,222604..222606,222613..222618, 222679..222681,222685..222687,222691..222693, 222697..222708,222721..222723,222739..222741, 222883..222885,222937..222939,223003..223005, 223009..223011,223027..223035,223039..223050, 223078..223080,223087..223089,223093..223095) /locus_tag="B565_0207" /note="alphaNTD - beta interaction site [polypeptide binding]; other site" /db_xref="CDD:132904" misc_feature order(222685..222687,222721..222723,222730..222732, 222739..222744,222934..222939,222943..222945, 223009..223011,223024..223029,223054..223056) /locus_tag="B565_0207" /note="alphaNTD - beta' interaction site [polypeptide binding]; other site" /db_xref="CDD:132904" misc_feature 223234..223410 /locus_tag="B565_0207" /note="Bacterial RNA polymerase, alpha chain C terminal domain; Region: RNA_pol_A_CTD; cl11613" /db_xref="CDD:187104" gene 223517..223900 /locus_tag="B565_0208" /db_xref="GeneID:10486125" CDS 223517..223900 /locus_tag="B565_0208" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L17" /protein_id="YP_004390860.1" /db_xref="GI:330827908" /db_xref="GeneID:10486125" /translation="MRHRLSGRQLNRNSSHRQAMFRNMASSLVRHEIIKTTLPKAKEL RRVVEPLITLAKTDSVANRRLAFARTRDNAIVAKLFNELGPRYLERAGGYTRILKCGF RAGDNAPMAYIELVDRPAAAEAAAE" misc_feature 223526..223864 /locus_tag="B565_0208" /note="Ribosomal protein L17; Region: Ribosomal_L17; cl00356" /db_xref="CDD:193783" gene 224933..226482 /locus_tag="B565_r004" /db_xref="GeneID:10486126" rRNA 224933..226482 /locus_tag="B565_r004" /product="16S ribosomal RNA" /db_xref="GeneID:10486126" gene 226687..226762 /locus_tag="B565_t007" /db_xref="GeneID:10489958" tRNA 226687..226762 /locus_tag="B565_t007" /product="tRNA-Glu" /db_xref="GeneID:10489958" gene 227176..229891 /locus_tag="B565_r005" /db_xref="GeneID:10489992" rRNA 227176..229891 /locus_tag="B565_r005" /product="23S ribosomal RNA" /db_xref="GeneID:10489992" gene 230003..230125 /locus_tag="B565_r006" /db_xref="GeneID:10489959" rRNA 230003..230125 /locus_tag="B565_r006" /product="5S ribosomal RNA" /db_xref="GeneID:10489959" gene 230220..230296 /locus_tag="B565_t008" /db_xref="GeneID:10489960" tRNA 230220..230296 /locus_tag="B565_t008" /product="tRNA-Asp" /db_xref="GeneID:10489960" gene 230883..232835 /locus_tag="B565_0209" /db_xref="GeneID:10489993" CDS 230883..232835 /locus_tag="B565_0209" /codon_start=1 /transl_table=11 /product="outer membrane protein" /protein_id="YP_004390861.1" /db_xref="GI:330827909" /db_xref="GeneID:10489993" /translation="MTTVKPNKLALLICSLLATQAYAAEQEVMVVTASGFQQKIEDSA ASISVITREQLEKRAYRDVTDALKDVPGVVVTGGGSSSDISIRGMGSKYTLMLVDGKK VDSRGTRPNSDGPGIEQGWLPPLQAIERIEVVRGPMSSRYGSDAMGGVINVITRKTTG LAWQGSVHADSTFQENKDAGNSFQTDAYTAGSLIDGVLGLRFNGQLAHRGEDKFIQGF AEQETRSGTAVLSFKPDDHNRFDLEASRSLQDRDRTAGNSLAAKAKDSLNRYERTNYA LTHDGQYDFGSSSSYLQQETNTNPGRKMELTNTIADTHTQFILGDHYLSVGGQYRYED LHDQGNTLKVANPAEQLTRWSWAMFVEDEWSLTDSFALTGGARMDRDQNYGSHWSPRL YGVWHLDDSWTLKGGVSTGYRSPDLRMSAANWGQVTGGGSLDGMLVGNPDLKPETSVS EEIGLLWNGHQGFNAGVTLFNTDFKNKISEVRRCTSKSDPACTLNGHSYDFISDRVNV DKANMRGVEGMMDWAINEDWSVSSSYTFTQSEQKSGPLAGHALNQMPRHMFNGSVDWQ TTEDLSLWSRVNFRGETSEYLSRVKMAEGTPSYTFFDMGLVYKANKHLDLTAGVYNLF DKTVDYSSYGTVLDGRRYNLGVTYNF" misc_feature 230883..232832 /locus_tag="B565_0209" /note="putative outer membrane receptor; Provisional; Region: PRK13513" /db_xref="CDD:184104" misc_feature 231018..232832 /locus_tag="B565_0209" /note="TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel; Region: ligand_gated_channel; cd01347" /db_xref="CDD:73259" misc_feature order(231018..231047,231075..231104,231138..231155, 231168..231191,231255..231287,231321..231347) /locus_tag="B565_0209" /note="N-terminal plug; other site" /db_xref="CDD:73259" misc_feature order(231777..231779,231792..231794) /locus_tag="B565_0209" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:73259" gene complement(232903..234291) /locus_tag="B565_0210" /db_xref="GeneID:10486127" CDS complement(232903..234291) /locus_tag="B565_0210" /codon_start=1 /transl_table=11 /product="GGDEF domain-containing protein" /protein_id="YP_004390862.1" /db_xref="GI:330827910" /db_xref="GeneID:10486127" /translation="MASSRTGVIVSIGWGLLLLALALPAWAKAPEEPIIITNSKAWQP FSYINESGQPDGLLIDLWREYARVTGQKIEFRLVDWQGSLDLLHEGKADVHAGLLWSP ERDKLFDYGRPLAQLDSQLFFSSELRGTDVHYYLLHETVGVVAGGYEEYYARRYFPGT RLQTFNDNDTLLAAAFKGEVKAFIADLQVANFYIYTSDDPTRFIPVRHLYTDQIRFAV RKGDLALLHRLEEGFAKLKESDRERIIRKWMHVETVYPIHLGPWLLLAGVLIMVAYIV QLRRAVASRTAELSRANARLEKQASTDPLTGLLNRRAFMPAMEQRLASGAPCALLLFD VDHFKETNDRFGHGIGDLLLEKLATTVTNLLPEEALLARIGGEEFCLLLPLATLAETE EWAERICLEINRQTLHTSSGEVTLSISTGAVWVAAEREADADQLLRQADALMYQAKGL GRNTWQAAPYQA" misc_feature complement(233545..234192) /locus_tag="B565_0210" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature complement(233548..234162) /locus_tag="B565_0210" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature complement(order(233734..233736,233848..233850, 233980..233982,234052..234054)) /locus_tag="B565_0210" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature complement(order(233755..233757,233773..233775, 233785..233787)) /locus_tag="B565_0210" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature complement(233647..233664) /locus_tag="B565_0210" /note="hinge residues; other site" /db_xref="CDD:29040" misc_feature complement(232924..233388) /locus_tag="B565_0210" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(233161..233163,233290..233292)) /locus_tag="B565_0210" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(233158..233169,233173..233175, 233239..233241,233251..233253,233263..233268, 233275..233277)) /locus_tag="B565_0210" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(233101..233103,233185..233187)) /locus_tag="B565_0210" /note="I-site; other site" /db_xref="CDD:143635" gene complement(234432..235823) /locus_tag="B565_0211" /db_xref="GeneID:10486128" CDS complement(234432..235823) /locus_tag="B565_0211" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /protein_id="YP_004390863.1" /db_xref="GI:330827911" /db_xref="GeneID:10486128" /translation="MGTLRRLWARMWPKGLTGQIILVALAGLILIQLLSIQIYRTDRE EALGFVNSRNAMQRIISVVRLLSLSPPSLYDEILKASRSETLLLRLSDEPLQPDNRSP RFEQLVRSRLNYPLGLTVEISAELKEDNQRSKAWEHHARMMRDRKGPPPPRDMRLYGS IELPQGGWLQFSSLVDKEAGSWSWQTTLNLMLVASLVIGLMVLLFRRATRPLKQLAGN AERLGRGEDIEPLKEEGPTEIRESIQAFNRMHTRLDRFVQDRTRMLAAISHDLRTPIT SLRLRTEFLADGEDKERIQQTLQQMEQMLAATLSFAREEGQQEATRELDLVSLLVSLC DDYADTGQPVTCLAEGKEVYACRANTLRRVLQNLIGNAIKYAGSAEVSLERRKEELLI RVCDNGPGIDPARLEDVFKPFVRLDEARNTESGSVGLGLSIARTLVHQHGGELTLLNR PQGGLEARISLPL" misc_feature complement(234435..235358) /locus_tag="B565_0211" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:30987" misc_feature complement(235065..235256) /locus_tag="B565_0211" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(234885..235052) /locus_tag="B565_0211" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature complement(order(234900..234902,234912..234914, 234921..234923,234933..234935,234942..234944, 234981..234983,234990..234992,235002..235004, 235011..235013,235023..235025,235035..235037)) /locus_tag="B565_0211" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature complement(235017..235019) /locus_tag="B565_0211" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature complement(234441..234743) /locus_tag="B565_0211" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(234453..234455,234459..234464, 234477..234479,234483..234485,234531..234542, 234621..234626,234630..234632,234636..234638, 234642..234644,234702..234704,234711..234713, 234723..234725)) /locus_tag="B565_0211" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(234711..234713) /locus_tag="B565_0211" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(234534..234536,234540..234542, 234624..234626,234630..234632)) /locus_tag="B565_0211" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(235827..236549) /locus_tag="B565_0212" /db_xref="GeneID:10486129" CDS complement(235827..236549) /locus_tag="B565_0212" /codon_start=1 /transl_table=11 /product="winged helix family two component transcriptional regulator" /protein_id="YP_004390864.1" /db_xref="GI:330827912" /db_xref="GeneID:10486129" /translation="MNQGNTHILVVDDHSEIRDLLKRFLEQHGLRVSCARDGKEMKRL LEEREFDLLVLDLMMPGEDGLTLCRELRVKSNLPIIMLTAMGEETDRIIGLEMGADDY LAKPFNPRELLARIKAVMRRTQAETQPAAETLTRDLRFDRWLLDVNRRELVDEDGVGL SLSTAEFDLLKVFLERPQRVLSRDQLLDLARGREAVAFDRAIDTLVSRLRRKLERDPK NPELIKTIWGGGYMFSADVTQV" misc_feature complement(235842..236549) /locus_tag="B565_0212" /note="osmolarity response regulator; Provisional; Region: ompR; PRK09468" /db_xref="CDD:181883" misc_feature complement(236190..236525) /locus_tag="B565_0212" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(236232..236237,236244..236246, 236301..236303,236358..236360,236382..236384, 236511..236516)) /locus_tag="B565_0212" /note="active site" /db_xref="CDD:29071" misc_feature complement(236382..236384) /locus_tag="B565_0212" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(236358..236366,236370..236375)) /locus_tag="B565_0212" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(236229..236237) /locus_tag="B565_0212" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(235851..236138) /locus_tag="B565_0212" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cd00383" /db_xref="CDD:29475" misc_feature complement(order(235860..235862,235875..235877, 235911..235916,235938..235940,235947..235949, 236001..236006,236061..236063)) /locus_tag="B565_0212" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29475" gene 236749..237099 /locus_tag="B565_0213" /db_xref="GeneID:10486130" CDS 236749..237099 /locus_tag="B565_0213" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390865.1" /db_xref="GI:330827913" /db_xref="GeneID:10486130" /translation="MKKLTKTLLTATLILGLPLGAYAASEAAPTGQPGAMVDCPMDGG GMMGGKHHGGRHDKMARMQNMTPEQIQANLQQRYDRIEDPAKKAEFIKKLNERAAGMT KHAEAMKQFAEANQ" gene complement(237279..237698) /locus_tag="B565_0214" /db_xref="GeneID:10486131" CDS complement(237279..237698) /locus_tag="B565_0214" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390866.1" /db_xref="GI:330827914" /db_xref="GeneID:10486131" /translation="MKKSLLVALTTLPLFANAGLMDSLTDSVTSSVKDAANTAVSGAV DSASNEAIKKALDIKEGGSNKQAIKEKLGAPATTKTESGLEVWTYDLDALNKASPLLA ETTKTLLKDTDAAKKNVVIKFEGETVKKVELTDKAQG" gene complement(237798..238712) /locus_tag="B565_0215" /db_xref="GeneID:10486132" CDS complement(237798..238712) /locus_tag="B565_0215" /codon_start=1 /transl_table=11 /product="putative HTH-type transcriptional regulator YeeY" /protein_id="YP_004390867.1" /db_xref="GI:330827915" /db_xref="GeneID:10486132" /translation="MAKESNKERALTLEAIRVLDAIDRRGSFAAAADELGKVPSALSY TVQKLEDELDAMLFDRSGHRTKFTPAGRMLLERGRVLLEAAEHLVGETRALARGWETD ITIAVDALVPVQALYPLVEKLAEQTDTRLRLRAEVLAGSWECLEDGRADLLISSINPD IMMTGIKHQVIKDEVMLYVAHPDHPLHQEPEPLADETLRRYRAIAVADTALRKPVLTY RLLDKQPRLTVSTMTEKRDALLAGIGVGTMPQSWIEEDIRAGRLKVISPEYRHQLQVV LAWRRDTMGKAKSWLVREIPKLFATGEK" misc_feature complement(238497..238676) /locus_tag="B565_0215" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(237837..238661) /locus_tag="B565_0215" /note="putative DNA-binding transcriptional regulator; Provisional; Region: PRK11074" /db_xref="CDD:182948" misc_feature complement(237828..238409) /locus_tag="B565_0215" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature complement(order(237990..237995,237999..238004, 238020..238037,238308..238328,238332..238334, 238350..238355,238359..238364)) /locus_tag="B565_0215" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene 238971..239303 /locus_tag="B565_0216" /db_xref="GeneID:10486133" CDS 238971..239303 /locus_tag="B565_0216" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390868.1" /db_xref="GI:330827916" /db_xref="GeneID:10486133" /translation="MNMKNVIKMLAVAGLMTTGFAQASVPADFNAMPGVLFVNWNATA AMDGKANPMLEVRDESGDLLASVHANLTGTQQVRIPSRTQGNLTVSLADQSSEYRIPF GIGSGKQR" gene 239334..240020 /locus_tag="B565_0217" /db_xref="GeneID:10486134" CDS 239334..240020 /locus_tag="B565_0217" /codon_start=1 /transl_table=11 /product="Cupin domain-containing protein" /protein_id="YP_004390869.1" /db_xref="GI:330827917" /db_xref="GeneID:10486134" /translation="MMQLRAAEARGKANFGWLDARHSFSFGHYYDPEWMGHSVLRVIN QDLVAPGGGFATHPHANMEILTCVLQGTIEHKDSLGHAEQIPAGDFQLMSAGSGIRHS EYNPSQTDPLSLLQIWIEPNEFGTPPGYQQKKIESRPGMTLVASPDGEDGSLRIRQQA RVWRLELAPGETLEWALAGRHGYLQMISGELTANGLAARPGDGVLSRDEYRWELVATS ASQALLFDLP" misc_feature 239343..239690 /locus_tag="B565_0217" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene 240060..240452 /locus_tag="B565_0218" /db_xref="GeneID:10486135" CDS 240060..240452 /locus_tag="B565_0218" /codon_start=1 /transl_table=11 /product="inner membrane protein YqjF" /protein_id="YP_004390870.1" /db_xref="GI:330827918" /db_xref="GeneID:10486135" /translation="MDKMKDVALLAGRVLLALMFVMAGWSKIGGYAGTQGYMEAMGVP GFMLPLVILLELGGGLAVVLGLFTRSLSVLLAGFTLMAAFIFHYQPAEQMQMLMFMKN VSVAGGFLALAAAGAGAFSLDARLGKNW" misc_feature 240114..240320 /locus_tag="B565_0218" /note="DoxX; Region: DoxX; cl00976" /db_xref="CDD:154119" gene 240711..244079 /locus_tag="B565_0219" /db_xref="GeneID:10486136" CDS 240711..244079 /locus_tag="B565_0219" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease V subunit gamma" /protein_id="YP_004390871.1" /db_xref="GI:330827919" /db_xref="GeneID:10486136" /translation="MFTLYHSNQLDLLKELLVSRIRQAPLSHPFDREQILVQSPGMAQ WLKLELAKAFGIAANIDFPLPASFIWEMFTRVLADVPRQSPYNKGSMSWQLMTILPAL LERPAFAPLAAYLGGGDEEDSARDPEQVRLWQLCQKVADLFDQYLVYRPDWIARWEEG EGLSQELAGVSGQDWQPELWRELVARTLALSPSGYHRANLYEEFIHELARTADLPGKL PQRVFVFGISALPPRYVEALLALGSRPEVEVHLFVTNPCRYYWGDLLDRKTLARLETK LKPGTDIETLQGPANPLLASMGKLGRDYLHQLMELEVPQIEAFVDIDEVDAKGNVSLL RAIQKDVLELAERGAGQFDLDSSHHKSPIDPADGSLQIHACHGPMRELEVLHDRLLAL FEQDPTLTPKDVVVMMPDVNSYGPYIQAVFGKEKSGARGQIPFAVSDRAASQESPLLQ SFLALLRLPNARFGAGELLAILEVPAVLRRFELDDDEFNQLRVWVQETGIRWGLDDGY PVRFDLPPMSGNSWLFGLRRMLLGFAMGDGEPVAGILPYADIEGQQGLALGKLAWFVD SLAEFLPRLQQAQPLAEWHACLLALLERFYLADEDEERQLQLIRSQLVEWQTRLGEAR FEQPITADLLQDYLGSVLGESRSSQRFLAGQVNFCTLMPMRSIPFKQVCLLGMNDGVY PRTLAPMGFDLMAVASRRGDRSRRDDDRYLFLEALLSAQQGLYISYQGFSAQDNSDKV PSVLLAELIDYVRQGFVLVGDEDLDDETSGKRLLNHLMVAHPLTPYSRNYFYPEAGSR LFTYAADWLPALNPVRGAANFQSGELPLPPEWGKEQGLELAELLRFYRQPTKYFLNRR LKVWFELNEANIEDSEPFELDGLQHYQLKDLLLDAHLAEGDSTERRERLQLTGLLPQG WFGSLLLDDLDAEMGKLADRLRPWIAADESEKQAVEIDISLTQGQLQGWIDTQKGRLL VVKPGSFNGKDLLLGWIQHLCLSLSSVPGDTLLFDAKQSLRLPKLSADEARPKLAALV ACWAQGMKRPLPFFPNTAWDWLKAIEKDPDKPEAADKAALTRFNGGWMINGEGQDVYV ARCFPELDDEVLGQLQALAREHLTPLLKTLEELK" misc_feature 240711..244031 /locus_tag="B565_0219" /note="exonuclease V subunit gamma; Provisional; Region: recC; PRK11069" /db_xref="CDD:182943" misc_feature 240714..243965 /locus_tag="B565_0219" /note="exodeoxyribonuclease V, gamma subunit; Region: recC; TIGR01450" /db_xref="CDD:162367" gene 244079..247678 /locus_tag="B565_0220" /db_xref="GeneID:10486137" CDS 244079..247678 /locus_tag="B565_0220" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease V subunit beta" /protein_id="YP_004390872.1" /db_xref="GI:330827920" /db_xref="GeneID:10486137" /translation="MANPLNTLRFPLHGERLIEASAGTGKTYTIAGLYLRLLLGHGPL IEEGADAGQPSAHERPLSVTEILVVTFTEAATAELRGRIRGRIHEARLAFMRGHSSDT LLAQLLAEVEDHELAARRLLAAERQMDEAAVFTIHGFCQRMLKQNAFESGALFETEFL TDDSQLRLQAVSDYWRAEFYPVDKTLASSVRALWPSPAALLREMGSWLDNSELEIHPA LGDETLAARHQAAMSRIAAVKGEWLAQTDEIRRQTDGQISRYTGKNYEGWLAKIADWA QDEGSGYAIPKELERFGQTVLEENLKKGGAVPTLPLFSQIDELLASRPGIRDLILQRA AKVVRSRMQASKRQAHQLSFDDLLKDLDGALGSSLGERLCERIRATYRVAMIDEFQDT DPQQYRIFHRLYGGHTDTALLMIGDPKQAIYGFRGADIFTYIQARRNVSAHYTLGRNW RSSSALVGAVNGLFERAKDPFIYEADIPFLPVEAQGKSKALLLDGATAPVLHCWQLSG QPTFNKGDYQSKLARATAVEIHRLLTLAREGKAKIGDQAVKAGDIAVLVRTGAEGKLV QQELARLAIASVYLSNRESVLEQTEAREILLILHACQNPSEERSLRAALATGLFDLDA KALDGLASDERAWESAVQEFMEYRKIWHRRGVLAMLRALLHRRNLASSLLASPYGERR LTNFLHLGELLQQVSSELDGEYALLRWLGEAVSRPNGQDAEQVLRLESERKLVQIVTI HKSKGLEYPLVFLPFICSHRTAETPLYHEADEAGNRTILDLTGAEGSLAEADRERLAE DLRLLYVALTRGVYATWLGLAPVRAGAGKSEKTDLHHTAIGYLLQKGEEGDAQTLATA LTELAQALPGVAVGEPSLTRPAPLPPEEEQLGEPQVRHFSGSLERDWWISSYSGLAAQ GHGHSKGVLANPGFDVEVVAEAAVVHEEDELQPSIFTFPKGARPGTLLHSLFETIDFQ SAGGEPLAEHVATLLAQDGFDESWAPVLQQQVEAVLDTPLDTGFGEPVRLRDLAPERK QVELEFFLPMGRVTAPALTALCQQHDPLSRGNKPLSFATVQGMLKGFIDLVFEWQGRW YLLDYKSNHLGMSPADYSRPALERAMAEHRYDLQYQLYSLALHRLLTLRLPGYDFEQH FGGVFYLFLRGMPQGGIFHTRPSRELVLGLDELFRNGDRSGGVSSAELNEVEA" misc_feature 244082..247645 /locus_tag="B565_0220" /note="exonuclease V subunit beta; Provisional; Region: recB; PRK10876" /db_xref="CDD:182801" misc_feature 244109..>244591 /locus_tag="B565_0220" /note="UvrD/REP helicase; Region: UvrD-helicase; cl14126" /db_xref="CDD:196784" misc_feature <245201..246187 /locus_tag="B565_0220" /note="UvrD/REP helicase; Region: UvrD-helicase; cl14126" /db_xref="CDD:196784" gene 247675..249738 /locus_tag="B565_0221" /db_xref="GeneID:10486138" CDS 247675..249738 /locus_tag="B565_0221" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease V subunit alpha" /protein_id="YP_004390873.1" /db_xref="GI:330827921" /db_xref="GeneID:10486138" /translation="MSGTMISTATSAMMVEQLKTLALAGRIRQLDLQFARLVADLGGS PELVLGAALTCFELGRGHVCLPLEMLATGSLRPFGLDPQQSRDLLGDLADPARWPALF AASPLVGTEQDEGPAPRWPLRLWHGRLYLTRYHDFELGVARHLRALSERAEWPEIAPA LSRLFARDYGLVFAALLKARLAPDFSARHFIEKYLDLVFPSEVDWPAIEALLASAQAA SDLSKLDALVPEALCCNGQKLAAATAAARPFAVISGGPGTGKTTTVAKLLAILVETGL QAGKAPAIRLVAPTGKAAARLTESIGSALQALDLPPEWVEAIPTEAGTLHRLLGVIPG RSQFRHHAGNPLHLDLLVVDEASMVDLPMMARLLDALPSHARLILLGDKDQLASVEAG AVLGDICSFIEQGISPAQADWLSRQTGYRLQGTPAGAPVRDSLCLLAKSWRFDQHSGI GQLARACNSGDATAVESVWGMGFADISLHPWAGEAYDALIAQGVAGYGGYLKAARAGE APAAVFKAFNSFQILCALRDGPFGVQGLNERLELALSRAGLIARDGDWYAGRPVMVVR NDHGVGLYNGDMGLCLPDESGRLKVWFEQPDGTLRALLPSRLPPHETVYAMTIHKSQG SEFAHTVLVLPDSPSPLLTRELVYTGITRAKARLDLYGDRALLAQAVRKKTERYSGLA ERLGE" misc_feature 247756..249729 /locus_tag="B565_0221" /note="exonuclease V subunit alpha; Provisional; Region: recD; PRK10875" /db_xref="CDD:182800" misc_feature 248524..>248811 /locus_tag="B565_0221" /note="Putative ATPase (DUF699); Region: DUF699; pfam05127" /db_xref="CDD:191197" gene 249834..250718 /locus_tag="B565_0222" /db_xref="GeneID:10486139" CDS 249834..250718 /locus_tag="B565_0222" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390874.1" /db_xref="GI:330827922" /db_xref="GeneID:10486139" /translation="MSEQKINPHQVTKPIQLLAAWLVGLILINGSFLSAAKIIESPEW VSGFLVIAAVLNVPIFLVLIFFLQTKFRAELQEDTYYSKHLEKVTGTYKNADEIALIA ERAKQVNNDKIDVLIDAVENLSFSLASDDIRSDALPMRPRKEGEIKEPIVNIGSGNHR SIVKVALNDLIPGYKVILKSLIRAGYSITEIFGSTSKDKRPPKNLIITCNSDVPKAAL KEIYEIIKPYGFDRIDIDINPRPMELANIYIGSYVDDYSEQRESIEIDGDLEDLLFDD NISGEQLAEYVRNIRFSS" gene 251071..251550 /locus_tag="B565_0223" /db_xref="GeneID:10486140" CDS 251071..251550 /locus_tag="B565_0223" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004390875.1" /db_xref="GI:330827923" /db_xref="GeneID:10486140" /translation="MRLEFKTIDLERDYEFCVQARRDAYFCSFHTHDGFADFIDGYRE RIRERLGQAQWHYLHVWAGEQRVGQLEFRSFSDEPETGYVQLIYLFPEYRGTGLAAVL QAYIRQQLLGAGCKWAMLSVSRTNVRALNHYRRFGWIFLRPNPKHQETDFYRLTLAE" misc_feature 251248..251484 /locus_tag="B565_0223" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene 251817..252815 /locus_tag="B565_0224" /db_xref="GeneID:10486141" CDS 251817..252815 /locus_tag="B565_0224" /codon_start=1 /transl_table=11 /product="sensory box protein" /protein_id="YP_004390876.1" /db_xref="GI:330827924" /db_xref="GeneID:10486141" /translation="MVQDSDTIRISDVSEAVVHGILEVTSDGIWDWHANTGFVYRNPG WYRMLGYEPHSLGNTVFTWENVIHPDDLAAVMAKFDLCLSGSAHEYRAEYRCRCRDGS YLWIEDCGRIIERNPDGSVARMIGAHRDIHARKLLLEQLERRNQSLEPQVAERTADLV RLNEALQQKAEENRLLAETDALTGAASRYRLERALQLECERARRFHQPFTVIAMDVDN FKQINDSYGHNAGDQTLINIVALVRRHIREIDLLARWGGDEFMVLLPNTGREDALVVA SKFQALMASEPICPHAPATMSFGLAEYQQDEQKESLMVRADRALYQAKQLGKDQIC" misc_feature 251889..252209 /locus_tag="B565_0224" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature 251928..252200 /locus_tag="B565_0224" /note="PAS fold; Region: PAS_3; pfam08447" /db_xref="CDD:117024" misc_feature order(251937..251939,251949..251951,251967..251969, 252012..252023,252102..252104,252117..252119) /locus_tag="B565_0224" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature order(252003..252005,252015..252017,252039..252041, 252048..252053,252138..252140,252144..252146) /locus_tag="B565_0224" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature 252351..252812 /locus_tag="B565_0224" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(252459..252461,252588..252590) /locus_tag="B565_0224" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(252474..252476,252483..252488,252498..252500, 252510..252512,252576..252578,252582..252593) /locus_tag="B565_0224" /note="active site" /db_xref="CDD:143635" misc_feature order(252564..252566,252648..252650) /locus_tag="B565_0224" /note="I-site; other site" /db_xref="CDD:143635" gene complement(252902..253528) /locus_tag="B565_0225" /db_xref="GeneID:10486142" CDS complement(252902..253528) /locus_tag="B565_0225" /codon_start=1 /transl_table=11 /product="outer membrane protein" /protein_id="YP_004390877.1" /db_xref="GI:330827925" /db_xref="GeneID:10486142" /translation="MNKFNKIAAFSLLALAMNGGAHAEGWYAGLDLTTSKMDLDGAAK DAYDAKVIDDQLDGGSLIVGYSFKPWLAVEGGLHAQQMDQLTWVTSPIASGFADTTIE TRSISLAAKLSQPLAWGFSAYAKPGIAYTRTEVEVVGNATFLGFSGQVNESATKSKVH PNLEVGLDYAFNDHFSAGIGYERQFDALSLGDEHYSLDTFKLGLRYHF" misc_feature complement(252905..253453) /locus_tag="B565_0225" /note="Surface antigen; Region: Surface_Ag_2; cl01155" /db_xref="CDD:194055" gene 253827..254018 /locus_tag="B565_0226" /db_xref="GeneID:10486143" CDS 253827..254018 /locus_tag="B565_0226" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390878.1" /db_xref="GI:330827926" /db_xref="GeneID:10486143" /translation="MVLNFHSSVAVMSCLKIGISDVTDWHQVIFDDFLNASQGETVRK KSIFLPVFCSFLGLGLFPL" gene complement(253992..254201) /locus_tag="B565_0227" /db_xref="GeneID:10486144" CDS complement(253992..254201) /locus_tag="B565_0227" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390879.1" /db_xref="GI:330827927" /db_xref="GeneID:10486144" /translation="MASIYKTTKLINQYYQYLLITPRPHPNNCCRVKRKATHKNPPTH LVGNMAHAKTASKDHQKSQWEQSQT" gene 254805..255569 /locus_tag="B565_0228" /db_xref="GeneID:10486145" CDS 254805..255569 /locus_tag="B565_0228" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390880.1" /db_xref="GI:330827928" /db_xref="GeneID:10486145" /translation="MTYSQTLANNILDTLKKTLTDKGIRYQTLAEAMGVSIATVKRMM NKPSLPFDTLLEICHLVGLSFEELLDRTQDAQSRRAVFTQEQDEAFHNEPGLYAFLAN IFWRDKTLIDLKREYGLTDASCYLYLRKLEKLGILQLGIDNSYHFLISERISFEQHSR FARQQARQAMSVLGEYLVENMHKSNNYMALCQLHLNEGEAMALIDRMKEYWHQEIKLN RPAIGQQEHAKTYTMSLQLADCGYQSFDDMIPNIDN" misc_feature 254844..255029 /locus_tag="B565_0228" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cl09100" /db_xref="CDD:195788" gene complement(255610..256419) /locus_tag="B565_0229" /db_xref="GeneID:10486146" CDS complement(255610..256419) /locus_tag="B565_0229" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_004390881.1" /db_xref="GI:330827929" /db_xref="GeneID:10486146" /translation="MTEPRLSEQRVNEQSMADGRSSSKCEQICQTLRRYIGSGQLGAG QQLPAERALSERFATTRITIKEALSSLEADGLIYRAERRGWFVAPPRLTYDPAIHTHF HQWIGEQQRTAETRVLAHGSELASSELCRWMGLEPFTPLYEIRRQRLIDGRPVLHVSH HLLANRFPDIASAPLASSLTELYQQRYGIGQGGASLEITPSAARGAIARALNLAEGSA VLRLVRVNYDERGGLVDCDIEHWRPDAIRICLDTRALQPIAGKLQQTRVAD" misc_feature complement(256156..256344) /locus_tag="B565_0229" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature complement(255664..256341) /locus_tag="B565_0229" /note="transcriptional regulator protein; Region: phnR; TIGR03337" /db_xref="CDD:132380" misc_feature complement(order(256165..256176,256180..256185, 256213..256215,256222..256227,256231..256245, 256267..256272,256276..256278)) /locus_tag="B565_0229" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature complement(255679..256098) /locus_tag="B565_0229" /note="UTRA domain; Region: UTRA; cl06649" /db_xref="CDD:195338" gene 256636..257700 /locus_tag="B565_0230" /db_xref="GeneID:10486147" CDS 256636..257700 /locus_tag="B565_0230" /codon_start=1 /transl_table=11 /product="Fe3+ ABC transporter periplasmic protein-like protein" /protein_id="YP_004390882.1" /db_xref="GI:330827930" /db_xref="GeneID:10486147" /translation="MMKSVIASALAMVAISQPLFATNSYAAENIADLEKAARGEGQLH SIGMPDSWANWKDTWQQLGSIYGIKHQDTDMSSAQEIAKFAAEKANATADIGDVGGAF GPVAVKQGVTQPYKPSTWADIPNWAKDADGHWMLAYTGTIAFLINKDLVKAAPTSWQS LLGGDYKVTLGDVGVASQANNGVLAAAYATGGSEKNLKPALELFGQLAKQGRLSLNDP TIANIEKGEVEVGVLWDFNALNYRDQIDPKKFDVVIPSDGSVIAGYTTIINKWAKNPN AAKLAREYILSDAGQINLARGYARPIRSNVTLPDDVKAKLLPAEQYANAKPVQDHAAW EQSSKALPRQWQETVMINMQ" misc_feature 256831..257682 /locus_tag="B565_0230" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene 257710..258543 /locus_tag="B565_0231" /db_xref="GeneID:10486148" CDS 257710..258543 /locus_tag="B565_0231" /codon_start=1 /transl_table=11 /product="type I phosphodiesterase / nucleotide pyrophosphatase family protein" /protein_id="YP_004390883.1" /db_xref="GI:330827931" /db_xref="GeneID:10486148" /translation="MQHKVIVVLVDGLAAEVAHTMGYLGGMVEAGRGLHTTLNAALPS LSRPLYECILTGVPPVVSGITHNGVSRLSLHDSIFHLARAAGKRTAAAAYYWVSELYN RSPWLAARDRFTHDEQLPIQHGCFYWDDHYPDSHLLMDGEWLRTQYDPDYLLIHPMGV DDAGHKFGLDSRQYRNQARRMDSLLADLLPQWLAEGYQVVITSDHGMNNDLSHGGTLP EERTVPLWLFGDAFIERWPDGVVIAQTQLCALMADLLGIPHDKPAAPPLLKAAFMREV H" misc_feature 257710..>258474 /locus_tag="B565_0231" /note="Sulfatase; Region: Sulfatase; cl10460" /db_xref="CDD:195965" gene 258543..259442 /locus_tag="B565_0232" /db_xref="GeneID:10486149" CDS 258543..259442 /locus_tag="B565_0232" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="YP_004390884.1" /db_xref="GI:330827932" /db_xref="GeneID:10486149" /translation="MMPATTEILVDQPVVTKHKVRRHWLPALVLLPFILLMILFQLAP MVWVLVGSFQTPDGWGLDYYREILSSPFYLQSFGNSLRIAGIASLAGLAIGTLGAAAL RHSGERVKRLLLAFVTMTGNFSGVPLAFAFIIILGINGAVTLLLKSWGLIDGFNLYSG SGLILIYTYFQIPLALLLLYPAFDALQDEWPQAAALLGASKGQYVWHVALPVLTPALL GTLIILFANAVGAYASAYALTTGNFNLVTIRVASLVSGDIFLEPNMAAALAVILMVLL GVVTAANQWLLKKSYVNKGQSHA" misc_feature 258669..259415 /locus_tag="B565_0232" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cl00427" /db_xref="CDD:193813" gene 259435..260211 /locus_tag="B565_0233" /db_xref="GeneID:10486150" CDS 259435..260211 /locus_tag="B565_0233" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="YP_004390885.1" /db_xref="GI:330827933" /db_xref="GeneID:10486150" /translation="MHDLTPRWPKWVLGGLVATLLLPLLATFLYSISTRWGATLLPDG FTLDWYLKLWGDPRFLAAFGRSLLVCFATLLLGTLVLVPTVLVVAYYFPKLDPWMNLL ILLPFAVPPVVSSVGLLQIYADGVLPIIGTPWILIGTWFTVVLPFMYRALANSLQGVP LRDLMDAAHLLGASSRRAFLLVVIPCLRKGLLAALFLSLSFLLGEFVFANMLVGTRYE TLQVYLYNMRATSGHFTSALVMSYFLLTLLLTWAANRFHR" misc_feature 259699..260187 /locus_tag="B565_0233" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(259699..259701,259729..259740,259744..259773, 259780..259785,259789..259791,259864..259869, 259873..259875,259882..259887,259891..259893, 259903..259908,259918..259920,259969..259971, 260011..260016,260023..260025,260044..260055, 260062..260067,260104..260109,260137..260142, 260149..260154,260158..260163,260170..260175, 260182..260187) /locus_tag="B565_0233" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(259747..259791,260044..260061) /locus_tag="B565_0233" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(259789..259791,259849..259851,260062..260064, 260098..260100,260107..260109,260137..260139) /locus_tag="B565_0233" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(259921..259959,259975..259980,259990..259992) /locus_tag="B565_0233" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 260218..261225 /locus_tag="B565_0234" /db_xref="GeneID:10486151" CDS 260218..261225 /locus_tag="B565_0234" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="YP_004390886.1" /db_xref="GI:330827934" /db_xref="GeneID:10486151" /translation="MFHLEVNQLHKSYGDTPVFEGIEFGIRKGELVTLLGPSGCGKST LLRALAGLTPVDGGQVRVAGEEITWQAPQKRGIGMVFQSYALFPNMTVWDNVAFGLKM KPQPGRELAASVQEALALVELTGFERRYPAELSGGQRQRVALARALVVQPRILLLDEP LSALDARIRRSLRQQIREIQQRLELTTIFVTHDQEEALTMSDRIFLMNKGSIVQSGTP EEIYTRPASEFVASFIGNYNLLGAEQGKSLFGPRFQGKLALRPESITLLPAGATSSEP SLPGIVRQQQLLGNVIRYQVQCEAGLLTVDCLNRSASDLLATGSAVTLAVARDQLCEV A" misc_feature 260218..261210 /locus_tag="B565_0234" /note="ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]; Region: PotA; COG3842" /db_xref="CDD:33633" misc_feature 260227..260922 /locus_tag="B565_0234" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 260323..260346 /locus_tag="B565_0234" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(260332..260337,260341..260349,260461..260463, 260689..260694,260791..260793) /locus_tag="B565_0234" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 260452..260463 /locus_tag="B565_0234" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 260617..260646 /locus_tag="B565_0234" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 260677..260694 /locus_tag="B565_0234" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 260701..260712 /locus_tag="B565_0234" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 260779..260799 /locus_tag="B565_0234" /note="H-loop/switch region; other site" /db_xref="CDD:72971" misc_feature 260986..261210 /locus_tag="B565_0234" /note="TOBE domain; Region: TOBE_2; cl01440" /db_xref="CDD:163979" gene 261265..261918 /locus_tag="B565_0235" /db_xref="GeneID:10486152" CDS 261265..261918 /locus_tag="B565_0235" /codon_start=1 /transl_table=11 /product="HAD-superfamily subfamily IB hydrolase" /protein_id="YP_004390887.1" /db_xref="GI:330827935" /db_xref="GeneID:10486152" /translation="MALALFDLDETLIAGDSASLWLEYMVAEELAPASMIAEEQAMMS LYHQGKMDMHQYMAFTLQPLAGKTRQWLDSLSTRFAEQVLRERLYPEGLARIEWHRER GDDLVLISASGEHLVAPMAKMLGMDHCVAILLDEEEGMLTGQTRGTLSFREGKVARIN QLFTGRDHLWQGSFGYSDSHNDLPMLRAVSHPHAVNPAPALRQQAEELGWPMLEWQR" misc_feature 261271..261867 /locus_tag="B565_0235" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" misc_feature 261271..261831 /locus_tag="B565_0235" /note="haloacid dehalogenase-like hydrolase; Region: Hydrolase; pfam00702" /db_xref="CDD:189678" gene complement(262036..263670) /locus_tag="B565_0236" /db_xref="GeneID:10486153" CDS complement(262036..263670) /locus_tag="B565_0236" /codon_start=1 /transl_table=11 /product="Pas:GGDEF" /protein_id="YP_004390888.1" /db_xref="GI:330827936" /db_xref="GeneID:10486153" /translation="MSPAKPKNTWSLITRMRLGLLLLFIPVLLLGSIYYLHMERTLRH EQQQYLIARNTQYFHTLIEPYLATLKRQFTLIYQQVNYQDFSGPEILNGERYLQQWQA YHKVMELDYVYVGTEHRKMLIHPSWQADEKFDPRTRPWYLLAASHPGQIVWTDPYYDY TLGTLTMALARVIEDPDGKRVGVLSLDTQLTPLASWLNSRHDQSHHLGNGYQILLNHD GLVLAHPDRERVFKPLAHPDWLARMQQPQGFFLDDASGLMVSYYRIPEQRWILLSVEP TASMQQVIDSVSINVQLMIAVACILYLLLALLWSRYFRRMLGEITLLIRASRSGGIAY NGRRMLELAKVYEEMDAASQDFAQIRLQAHQDKLTGLYNRRFFDECLQKQLNSGAPFG VVMFDLDDFKRVNDTHGHQAGDVVLKRVSKLGMNLFHEWGWFCRYGGEELVLIFRYGE EQPMLPSLLEAFRLGVEQLEWREPDLTITISGGVAFSRSGLSAKELVELADKGVYQAK REGKNRICFPLRHTPHQSAEEDIPAFGEPRQQTNEG" misc_feature complement(262993..263214) /locus_tag="B565_0236" /note="Cache domain; Region: Cache_1; pfam02743" /db_xref="CDD:145738" misc_feature complement(<262429..263061) /locus_tag="B565_0236" /note="regulatory protein CsrD; Provisional; Region: PRK11059" /db_xref="CDD:182935" misc_feature complement(262123..262581) /locus_tag="B565_0236" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(262351..262353,262480..262482)) /locus_tag="B565_0236" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(262348..262359,262363..262365, 262429..262431,262441..262443,262453..262458, 262465..262467)) /locus_tag="B565_0236" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(262288..262290,262375..262377)) /locus_tag="B565_0236" /note="I-site; other site" /db_xref="CDD:143635" gene 263754..264194 /locus_tag="B565_0237" /db_xref="GeneID:10486154" CDS 263754..264194 /locus_tag="B565_0237" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390889.1" /db_xref="GI:330827937" /db_xref="GeneID:10486154" /translation="MLNHTLLSMIHYGSIAVLILALCVEYLIFRRGLNMLRVRRLLLA DGVAALALFSIFATGCLLALEHASSVAEIFAHPAHGLKMGLFLLIVGSLVYPSRLFYR WRRALRLGKAPMISIQQHFRVVWILRGNLLLIALLAVFTKPSLL" misc_feature 263754..264140 /locus_tag="B565_0237" /note="Predicted membrane protein (DUF2214); Region: DUF2214; cl01427" /db_xref="CDD:194133" gene 264332..265231 /locus_tag="B565_0238" /db_xref="GeneID:10486155" CDS 264332..265231 /locus_tag="B565_0238" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="YP_004390890.1" /db_xref="GI:330827938" /db_xref="GeneID:10486155" /translation="MRSNLMLLMAATIWGMGFVAQRLGMDHMGPYTFNGLRFLLGALS LLPLLWWLKSRQPVAVAGDHSQLLIGGVLAGLVLFCAASLQQVGLLYTTAAKAGFITG LYIILVPVLGLLLRHKSGLNTWIGALIALTGLYVLSVTDEFTIGFGDLLQVVGALFWA VHLLLVDHYSNRVAPIKLAGVQFVVCGLLSLATAFVIETPTVAGAVAGWQALLYAGLV SVGVGYTLQVVGQRGAHPAHAAIILSLETVFAAVGGVLLLGETLDERAIAGCALMLAG MLISQIRLRWWWKSRRDKVPATK" misc_feature 264800..265168 /locus_tag="B565_0238" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene complement(265298..265924) /locus_tag="B565_0239" /db_xref="GeneID:10486156" CDS complement(265298..265924) /locus_tag="B565_0239" /codon_start=1 /transl_table=11 /product="glutathione S-transferase III" /protein_id="YP_004390891.1" /db_xref="GI:330827939" /db_xref="GeneID:10486156" /translation="MIVLHHLNKSRSQRIIWLLEELGQPYEIKAYQRDAATFLAPPEL KAIHPLGKSPVIEFDGRVLAESGAITEYLIARHAPDQLAPAPDSPDYPEYLQWLHFAE SSGILPLLLDMFVRKDGSPMRFLPDYAKAECAKVLGYLNEVLANRHYLVGARLSGADI MNSFLVDLLAQSGQLAHFPHLQAYWERLNTHPARQKAVELERELDQRP" misc_feature complement(265310..265924) /locus_tag="B565_0239" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: Gst; COG0625" /db_xref="CDD:30970" misc_feature complement(265691..265921) /locus_tag="B565_0239" /note="GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins...; Region: GST_N_GTT1_like; cd03046" /db_xref="CDD:48595" misc_feature complement(order(265712..265717,265724..265726, 265862..265867,265874..265879,265883..265888, 265892..265894)) /locus_tag="B565_0239" /note="putative C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48595" misc_feature complement(order(265727..265732,265763..265771, 265892..265894)) /locus_tag="B565_0239" /note="putative GSH binding site (G-site) [chemical binding]; other site" /db_xref="CDD:48595" misc_feature complement(order(265712..265714,265721..265726, 265730..265735,265769..265771)) /locus_tag="B565_0239" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:48595" misc_feature complement(265349..265675) /locus_tag="B565_0239" /note="GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins...; Region: GST_C_GTT1_like; cd03189" /db_xref="CDD:48116" misc_feature complement(order(265424..265426,265433..265435, 265442..265447,265454..265456,265619..265621, 265640..265642)) /locus_tag="B565_0239" /note="putative N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48116" misc_feature complement(order(265508..265510,265628..265630, 265637..265642)) /locus_tag="B565_0239" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:48116" misc_feature complement(order(265424..265426,265592..265597, 265604..265609,265619..265621)) /locus_tag="B565_0239" /note="putative substrate binding pocket (H-site) [chemical binding]; other site" /db_xref="CDD:48116" gene complement(266031..267299) /locus_tag="B565_0240" /db_xref="GeneID:10486157" CDS complement(266031..267299) /locus_tag="B565_0240" /codon_start=1 /transl_table=11 /product="O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase subfamily protein" /protein_id="YP_004390892.1" /db_xref="GI:330827940" /db_xref="GeneID:10486157" /translation="MKDATLALHHGFSNDPTTKAVAVPIYQTVAYEFESAQHGADLFN LAVPGNIYTRIMNPTNDVLEQRMAALEGGIAALVVSAGSAAITYAIQALTAAGDNIVS TPQLYGGTYTLFAHMLPSFGVEVRFAKDDSAEAIAALIDDKTKAVYCESIGNPAGNIV DLAALAKAAHARGVPLIVDNTVATPVLCKPIEHGADIVVHSLTKYVGGHGNSLGGVVV DSGKFPWADHAERFPQLTKPEPSYHGVVYTEAFGPAAFIGRVRTVPLRNTGAALAPMN AFLLLQGLETLSLRMERHVDNALRVAHHLKHHPKVAWVSYAGLPGHPHYLLAEKYMAG RPSAILSFGLKDGYEAGVRFYDALKIFKRLVNIGDAKSLACHPASTTHRQLSEEEQAK AGVKPEMIRLSVGIEAIEDILADLDQALEA" misc_feature complement(266034..267299) /locus_tag="B565_0240" /note="O-acetylhomoserine aminocarboxypropyltransferase; Validated; Region: PRK06084" /db_xref="CDD:180392" misc_feature complement(266037..267245) /locus_tag="B565_0240" /note="CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of...; Region: CGS_like; cd00614" /db_xref="CDD:99738" misc_feature complement(order(266232..266234,266472..266477, 266481..266483,266514..266516,266661..266663, 266667..266669,266691..266693,266955..266957, 266964..266966,266979..266981,267048..267053, 267057..267062,267138..267140,267144..267146, 267201..267206,267210..267221)) /locus_tag="B565_0240" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99738" misc_feature complement(order(266661..266663,266688..266693, 266697..266699,266763..266765,266850..266852, 266979..266981,267051..267059)) /locus_tag="B565_0240" /note="substrate-cofactor binding pocket; other site" /db_xref="CDD:99738" misc_feature complement(order(266688..266693,266697..266699, 266754..266756,266763..266765,266979..266981, 267051..267059)) /locus_tag="B565_0240" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99738" misc_feature complement(266688..266690) /locus_tag="B565_0240" /note="catalytic residue [active]" /db_xref="CDD:99738" gene complement(267450..267626) /locus_tag="B565_0241" /db_xref="GeneID:10486158" CDS complement(267450..267626) /locus_tag="B565_0241" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390893.1" /db_xref="GI:330827941" /db_xref="GeneID:10486158" /translation="MSHANPIKPNRIQQTLRRYFKRILPRPLPLIEDPMQQLNRLMQW DMNQIDDKEYRRRL" gene 267727..269430 /locus_tag="B565_0242" /db_xref="GeneID:10486159" CDS 267727..269430 /locus_tag="B565_0242" /codon_start=1 /transl_table=11 /product="ABC transporter periplasmic binding protein" /protein_id="YP_004390894.1" /db_xref="GI:330827942" /db_xref="GeneID:10486159" /translation="MPTGRLYQQFQRLAQLLGSDEREISLAEVADLLCCTPRNARLLL RRMQDQGWLSWSAEAGRGRRSRLTLLDSQESLTRRRLRDLLSQGQLAQAVRLAEDRLD LLTPLLIEQLGQATREGRQILRVPYYRPLPQLLPTGPMRRSEIHLSRQIFNGLTRRNE ENGEIEGDLAHHWECLGPCHWRFYLRPAVRFHHGRELVVEDVMESLLALRDRPLFSHL TRLESPWPRTLDLYLDSPDPWLPHLLAEPVATILPRELKGEAGFALQPVGTGPYRVAA NDPLHLCLAAFDDYFGLRALLDEIDIWMLPELAERLETHLQLGRDSPELGTMRGESEL ESGCYFLLQDDRSGSLQDPALRQWLGQLLNPVALMGRVAPELQRGWTSALGLLPHWRE ALPAPLPTPEQLPTTLVLACFNQHLEFNECANAMSSLLAEQGIRLEVRTLDYGRWVSG EDEDVDLWLGTLNLEHAGPFAPYAWLLGTPLLRKVWSSQHELWQGLMQWRASGEEPGP RALLATVQQQSWFVPLFHHWLELESRVGVHGVRMTALGWFDFRSAWLRPEPPHQLAEA P" misc_feature 267727..269406 /locus_tag="B565_0242" /note="transcriptional regulator SgrR; Provisional; Region: PRK13626" /db_xref="CDD:184188" misc_feature 267739..268083 /locus_tag="B565_0242" /note="Sugar transport-related sRNA regulator N-term; Region: SgrR_N; pfam12793" /db_xref="CDD:193269" misc_feature 268075..269394 /locus_tag="B565_0242" /note="The C-terminal solute-binding domain of DNA-binding transcriptional regulator SgrR is related to the ABC-type oligopeptide-binding proteins and contains the type 2 periplasmic-binding fold; Region: PBP2_SgrR_like; cd08507" /db_xref="CDD:173872" gene 269654..271753 /locus_tag="B565_0243" /db_xref="GeneID:10486160" CDS 269654..271753 /locus_tag="B565_0243" /codon_start=1 /transl_table=11 /product="Catalase/peroxidase HPI" /protein_id="YP_004390895.1" /db_xref="GI:330827943" /db_xref="GeneID:10486160" /translation="MEWWPKSLNLDILHQHDTKTNPLGAGFNYREALKGLDMAALKQD VTALMTDSQEWWPADWGHYGGLMIRMAWHSAGTYRIADGRGGGGSGNQRFAPLNSWPD NANLDKARRLLWPIKKKYGNKISWADLIILAGTVAYESMGLKTFGFAFGREDIWHPEK DIYWGSEKEWLAPSGKPGGRYSGERDLENPLAAVMMGLIYVNPEGVDGKPDPLKTAQD MRVTFARMAMDDEETVALTAGGHTVGKAHGNGDAKQLGPEPEGASLEEQGLGWINHHS RGIGRNTVTSGIEGAWTTHPTQWDNGYFELLFKYDWWLQKSPAGAHQWEPINIAEEDM PVDVEDPSIRCKPMMTDADMALKFDPEYRKIAERFRDDPAAFSDAFARAWFKLTHRDM GPKSRYVGPYVPTEDLIWQDPVPAGRADYDVAAVKARIAASGLSISERVSTAWDSART FRGSDKRGGANGARIRLAPQKDWPGNEPAKLAKVLAVYDKLAAECGVSVADLIVLGGN LAIEQAAQAAGVTVSVPFAPGRGDATQAQTDVASFEVLEPLADGFRNWLKQDYVVTAE ELLLDRAQLMGLTACEMTALVGGMRVLGTNHGGTGHGVFTDRVGVLSNDFFVNLTDMG YQWLPKASNLYEIRDRRSGALKWTATRVDLVFGSNSVLRAYAEVYAQDDNKEKFVCDF ITAWNKVMNADRFDLLG" misc_feature 269654..271744 /locus_tag="B565_0243" /note="catalase/hydroperoxidase HPI(I); Provisional; Region: PRK15061" /db_xref="CDD:185021" misc_feature 269657..270877 /locus_tag="B565_0243" /note="N-terminal catalytic domain of catalase-peroxidases; Region: catalase_peroxidase_1; cd00649" /db_xref="CDD:173824" misc_feature order(269657..269665,269672..269674,269678..269680, 269693..269695,269816..269818,269930..269941, 269945..269950,269984..269986,269993..269995, 270005..270007,270014..270019,270029..270031, 270119..270127,270131..270133,270137..270142, 270155..270163,270425..270427,270431..270433, 270443..270448,270452..270460) /locus_tag="B565_0243" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173824" misc_feature order(269846..269851,269855..269860,269867..269869, 270254..270256,270260..270262,270320..270322, 270359..270364,270371..270376,270380..270394, 270506..270511,270527..270529,270701..270703, 270707..270709,270791..270793,270803..270805) /locus_tag="B565_0243" /note="active site" /db_xref="CDD:173824" misc_feature order(269846..269851,269855..269860,269867..269869, 270254..270256,270260..270262,270320..270322, 270359..270364,270371..270376,270380..270394, 270506..270511,270527..270529,270701..270703, 270707..270709,270791..270793,270803..270805) /locus_tag="B565_0243" /note="heme binding site [chemical binding]; other site" /db_xref="CDD:173824" misc_feature 270887..271735 /locus_tag="B565_0243" /note="C-terminal non-catalytic domain of catalase-peroxidases; Region: catalase_peroxidase_2; cd08200" /db_xref="CDD:173828" gene 272017..272412 /locus_tag="B565_0244" /db_xref="GeneID:10486161" CDS 272017..272412 /locus_tag="B565_0244" /codon_start=1 /transl_table=11 /product="thioesterase family protein" /protein_id="YP_004390896.1" /db_xref="GI:330827944" /db_xref="GeneID:10486161" /translation="MLEMQIQPRFQETDALGHINNTVPAVWFESARDPLFRIFSPDLD VHNWHLIIAGYTVQFKRELFYGQPVTIKTGVRRIGTSSFTVWQEAWQGGELAVTAETT LIHFDYRARQSLPLSDAHREGLRAWLTES" misc_feature 272023..272337 /locus_tag="B565_0244" /note="4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active...; Region: 4HBT; cd00586" /db_xref="CDD:48031" misc_feature order(272101..272103,272164..272166,272170..272172, 272251..272262) /locus_tag="B565_0244" /note="active site" /db_xref="CDD:48031" gene 272445..273158 /locus_tag="B565_0245" /db_xref="GeneID:10486162" CDS 272445..273158 /locus_tag="B565_0245" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390897.1" /db_xref="GI:330827945" /db_xref="GeneID:10486162" /translation="MYNSMRNTAIALTLGFCSLPSLAASLAEQFTLMEKGAESALDTR QFSHDGVDIKAWIDGAPVIIAVPIMNELGKLEGESRYYFKGGKLFGVKEPAAQFAFDD SGKLTQWLDEKGQPAEFVSKMSMQQRQEWLTKRAAELSKLFVVSAAEQKVAKGGVKLK GADLAHWLCNGKLMDLAHGDKVIFEQDKLKIGEQGIEGEVSLRQDKGWQELSLKCEVQ GTQVTRLTWQPLPGANKPQ" gene complement(273195..273944) /locus_tag="B565_0246" /db_xref="GeneID:10486163" CDS complement(273195..273944) /locus_tag="B565_0246" /codon_start=1 /transl_table=11 /product="Lipase chaperone" /protein_id="YP_004390898.1" /db_xref="GI:330827946" /db_xref="GeneID:10486163" /translation="MKIATLLVVPCAITLLLGGVLLWPTAPTADSSPAQTSQHAQSHP HDPEQEAADALQARYRTFVSAQSSLTVPTEITLASLQILFDEREQLRQQSFTPAEQAQ LFAEDRLMEQLTLRRRALAEARDSDKSQLASELDLWLAEQPGWFREAEANSRLLEELQ ELAQMDPAKREALLLETGGPEAVDRMRQLEQNRQGFEEQLSGFLAELRQLPNEARAEQ QQELLARWFEPGQWRRVEALTRLKLGEPHTE" misc_feature complement(273246..273785) /locus_tag="B565_0246" /note="Proteobacterial lipase chaperone protein; Region: Lipase_chap; cl02224" /db_xref="CDD:194279" gene complement(273941..274855) /locus_tag="B565_0247" /db_xref="GeneID:10486164" CDS complement(273941..274855) /locus_tag="B565_0247" /codon_start=1 /transl_table=11 /product="Lipase" /protein_id="YP_004390899.1" /db_xref="GI:330827947" /db_xref="GeneID:10486164" /translation="MMKRWLLVLLCTLPMLAHASGYTQTRYPIVLVHGLFGFDKLLGV DYFYGIPQALSRDGAKVYVAQVSATASSEQRGEQLLAQVELLLAATGAEKVNLIGHSH GGPTIRYVASVAPELVASATSVGGVNYGSEIADLVRANAAPGSAAEKLAAAAAHALSG MISLLSGGSQLPQDPVAALDALTSKGASQFNQRYPEGLPSRYCGEGPMQATNGVYYFS WSGRGNLTNLLDPVDPALALTGAFFKEPNDGLVGVCSSHLGKVIGTDYRMNHLDEVNQ SFGIHHLFETDPVTLYRQHANRLKELGL" misc_feature complement(273953..274807) /locus_tag="B565_0247" /note="Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]; Region: LipA; COG1075" /db_xref="CDD:31273" gene complement(275021..276286) /locus_tag="B565_0249" /db_xref="GeneID:10486165" CDS complement(275021..276286) /locus_tag="B565_0249" /codon_start=1 /transl_table=11 /product="Tyrosyl-tRNA synthetase" /protein_id="YP_004390900.1" /db_xref="GI:330827948" /db_xref="GeneID:10486165" /translation="MINPHLLDELTERGLVAQNSDTAALADHLATPRTVYCGFDPTAG SLHIGHLVPLLMLRRFQLAGHTPVALVGGATGLIGDPSFKATERSLNSTDTVQGWVAS LSAQIRALLPADEGLSAPQLVNNGDWMGQMSALDFLRDIGKHFSVNAMLARESVRQRL ARPDQGISFTEFSYALLQSYDFAVLHQRLGCTLQIGGNDQWGNITSGMDLTRRLHQAQ VHGMTLPLITKADGTKFGKTEGGAVWLDPALTSPYAFYQFWLGTADEDVYRFLRYYSF MSLSEIDALEAEDAKRQGRKQAQQVLANELTELVHGKAALAAVQRISELLFSGDVARL GESDLAQLAQDGMPCSTVSGETDLVSLLVSCGLANSRRIARELLAAGAISLNGVLKQD DQLSATDRLFGRYLLLRRGKKQYHLVEWQ" misc_feature complement(275027..276286) /locus_tag="B565_0249" /note="tyrosyl-tRNA synthetase; Validated; Region: PRK05912" /db_xref="CDD:180311" misc_feature complement(275360..276187) /locus_tag="B565_0249" /note="catalytic core domain of tyrosinyl-tRNA synthetase; Region: TyrRS_core; cd00805" /db_xref="CDD:173902" misc_feature complement(order(275576..275587,275606..275611, 275687..275689,275696..275701,275705..275707, 275744..275746,275753..275755,275765..275767, 276137..276142,276146..276148,276167..276175, 276179..276181)) /locus_tag="B565_0249" /note="active site" /db_xref="CDD:173902" misc_feature complement(276137..276148) /locus_tag="B565_0249" /note="HIGH motif; other site" /db_xref="CDD:173902" misc_feature complement(order(275756..275761,275768..275773, 275777..275779,275834..275839,275843..275854, 275858..275863,275870..275878,275882..275887, 276053..276058,276065..276067)) /locus_tag="B565_0249" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173902" misc_feature complement(275573..275587) /locus_tag="B565_0249" /note="KMSKS motif; other site" /db_xref="CDD:173902" gene 276272..276436 /locus_tag="B565_0248" /db_xref="GeneID:10486167" CDS 276272..276436 /locus_tag="B565_0248" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390901.1" /db_xref="GI:330827949" /db_xref="GeneID:10486167" /translation="MGVDHGFSNSRGKSRHPRRSGRWRICPLRDSFATLVLAFSHSGE SLPVTGNVSP" gene 276433..277281 /locus_tag="B565_0250" /db_xref="GeneID:10486166" CDS 276433..277281 /locus_tag="B565_0250" /codon_start=1 /transl_table=11 /product="LuxR family transcriptional regulator" /protein_id="YP_004390902.1" /db_xref="GI:330827950" /db_xref="GeneID:10486166" /translation="MTQPSTTDALTRSMTEVVDALHSSAFAAALVRLIQQQVAFDCAL LLGVGQRPVYLYDNLNHQRALLFDRYLTSHFSQDPFMQALEQDLPAGVWTLAQVSQGR LDPEYRHHFYQATGWQEEVGLILPVRDGLTLMLFLGRLDKRSTLSRDELARLEQLFPL VHSLCRQQWRQSQPLLAQSTVLPDSASLKSAVELAMASVGGDGLTRRERQVAELLLQG LDTEAIAAELGIGSGTVKNHRKHLYGKLRLGSRAELFNLFLNHLITAPVEASQASSAG DKENPP" misc_feature <276811..277191 /locus_tag="B565_0250" /note="transcriptional regulator MalT; Provisional; Region: PRK04841" /db_xref="CDD:179885" misc_feature 277042..277212 /locus_tag="B565_0250" /note="C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors...; Region: LuxR_C_like; cd06170" /db_xref="CDD:99777" misc_feature order(277045..277053,277090..277098,277120..277125, 277129..277134,277138..277152,277183..277185) /locus_tag="B565_0250" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:99777" misc_feature order(277078..277080,277084..277086,277090..277092, 277183..277191,277198..277200,277207..277212) /locus_tag="B565_0250" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:99777" gene complement(277294..278070) /locus_tag="B565_0251" /db_xref="GeneID:10486168" CDS complement(277294..278070) /locus_tag="B565_0251" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter periplasmic binding protein" /protein_id="YP_004390903.1" /db_xref="GI:330827951" /db_xref="GeneID:10486168" /translation="MRRLLPALASLALFIALPAPALIYYSEQNMPLNGQDKNGQPVGL AVELLRLMWREMGEPEQPIHFLPWARGWYLLTQQQEAVLFTTAHTKERDPHFLWVCPI SHSRVALVGRKQDAPKVSSKADLAKLQIGVMQADVGEQLLLNRGISPSNMMSVERMDQ VVRQLIMARTDLVAGNEVMLRHQAKELGFPSEDFVTVAIIEEQDNCFAFNLRANKQQV ARLQQALDKVKQGDEYKQLMKRYQLLSILPETTPTIPRIE" misc_feature complement(277348..277980) /locus_tag="B565_0251" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature complement(277348..277980) /locus_tag="B565_0251" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature complement(order(277543..277545,277660..277662, 277795..277797,277867..277869)) /locus_tag="B565_0251" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature complement(order(277564..277566,277582..277584, 277594..277596)) /locus_tag="B565_0251" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature complement(277441..277458) /locus_tag="B565_0251" /note="hinge residues; other site" /db_xref="CDD:29040" gene complement(278180..279436) /locus_tag="B565_0252" /db_xref="GeneID:10486169" CDS complement(278180..279436) /locus_tag="B565_0252" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390904.1" /db_xref="GI:330827952" /db_xref="GeneID:10486169" /translation="MRIMPLLQAACLSLMLSACVAPLLMMSPTSQLMWALLKPLVGFD PNEVNLFEQPLIKDRMTAILGPNYDSTMQLLKTADKLQQEGPLFYVVSEYAPVPDIAK QAGMVWNSQTNQMSVLLQKGDGTTLTFGENLAGTAPTWPTAMQGWQTPTSQLTPATNA LTGAATSQSGASPFSLGSALGTVTRGVTGSLTNSASQAISGAAANATGQAARQATGQA TQAVTQSATDLTRSATTAVTAPAKQAVSSAAATATQEATKAVATPAKQAVSSTAATAT QEATKAVTVPAKQAVSSAAAAATQEATKAAVAPAKQAVSSAAAAATQEATKAVAAPAK QAVSSAAATATQEATKAVTAPAKQAVSSAAATETQEATKAVAAPAKQAVSAASHTAGE SVADAARAAEAKARAKAEAEMEALLK" gene 279659..279976 /locus_tag="B565_0253" /db_xref="GeneID:10486170" CDS 279659..279976 /locus_tag="B565_0253" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390905.1" /db_xref="GI:330827953" /db_xref="GeneID:10486170" /translation="MKNLLLCLLASLWLAPALAVSKTTVVGESVSPELVLPLGSLPER VCWFADQKYSEGARILQGDIWLECGPQNDLESNGALAWRSPAVVLPATRGAKDQKTIS VGQ" misc_feature 279755..279913 /locus_tag="B565_0253" /note="Protein of unknown function (DUF1496); Region: DUF1496; pfam07383" /db_xref="CDD:191736" gene complement(280287..281735) /locus_tag="B565_0254" /db_xref="GeneID:10486171" CDS complement(280287..281735) /locus_tag="B565_0254" /codon_start=1 /transl_table=11 /product="Catalase" /protein_id="YP_004390906.1" /db_xref="GI:330827954" /db_xref="GeneID:10486171" /translation="MTDKTLHSANGAPVVDNNNSLTAGPRGPILMQDIWLMEKLAHFD RERIPERVVHAKGSGAYGTFTVTHDISQFSKADLFSAIGKQTPVFLRFSTVAGEKGAA DAERDVRGFALKFYTEQGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPRTNLRSATA AWDFWSRHPESLHQVTILFSDRGIPKSLREMNGYGSHTFSFINDANERFWVKFHFKTE QGHSFYTDEEAATAVGQDRETSQADLFNAIERGDFPRWKVYVQVMPEAEAQTYNIHPF DLTKVWPHSDYPLIPVGVLELNQNPDNYFAHVEQAAFTPANVVPGIGFSPDRMLQGRL FSYGDTQRYRLGVNHGLLPVNAPRCPFHHGAHRDGAMRADSNGGASPNYQPNRFGTQQ PSEQHEPALSLEGAALHYDFRDYDSDYYSQPGNLFRIMDEGQRSRLAANLARSLINVE DDAIVAAQLKHFEQADPEYAKRVELALAALQR" misc_feature complement(280305..281735) /locus_tag="B565_0254" /note="Catalase [Inorganic ion transport and metabolism]; Region: KatE; COG0753" /db_xref="CDD:31096" misc_feature complement(280305..281597) /locus_tag="B565_0254" /note="Clade 3 of the heme-binding enzyme catalase; Region: catalase_clade_3; cd08156" /db_xref="CDD:163712" misc_feature complement(order(280365..280367,280380..280382, 280386..280388,280392..280397,280575..280592, 280620..280628,280632..280634,280644..280646, 280650..280655,280665..280667,280677..280688, 280692..280697,280701..280709,280716..280721, 280728..280736,280743..280745,280752..280754, 280758..280760,280782..280787,280806..280808, 280815..280817,280821..280826,280830..280832, 280908..280910,280914..280916,280929..280934, 281001..281003,281010..281015,281022..281024, 281034..281039,281046..281048,281055..281057, 281247..281249,281256..281258,281268..281285, 281301..281303,281310..281312,281316..281330, 281373..281378,281433..281438,281580..281582, 281595..281597)) /locus_tag="B565_0254" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:163712" misc_feature complement(order(280725..280727,280737..280739, 281316..281318,281340..281342,281355..281357, 281457..281459,281574..281576)) /locus_tag="B565_0254" /note="heme binding pocket [chemical binding]; other site" /db_xref="CDD:163712" misc_feature complement(order(280458..280463,280470..280472, 280884..280895,281088..281090,281094..281096, 281160..281162,281190..281192,281196..281198, 281205..281207,281217..281219,281346..281348)) /locus_tag="B565_0254" /note="NADPH binding site [chemical binding]; other site" /db_xref="CDD:163712" gene 281897..282394 /locus_tag="B565_0255" /db_xref="GeneID:10486172" CDS 281897..282394 /locus_tag="B565_0255" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004390907.1" /db_xref="GI:330827955" /db_xref="GeneID:10486172" /translation="MQITIRHAEPADAPALRDLYAMPNAQAGTLHLPMPPLSQWQKRL ESDSVVALVADVDGLLVGQLSLLVEPNPRRKHVAGIGMGVRDDWAGKGVGSTLMAAAL DLADNWLNLHRIELTVYTDNEAAQALYRKFGFTEEGRARDYAFRQGRYVDALYMARVA GSVSR" misc_feature 281900..282373 /locus_tag="B565_0255" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene 282399..283259 /locus_tag="B565_0256" /db_xref="GeneID:10486173" CDS 282399..283259 /locus_tag="B565_0256" /codon_start=1 /transl_table=11 /product="DNA gyrase inhibitor" /protein_id="YP_004390908.1" /db_xref="GI:330827956" /db_xref="GeneID:10486173" /translation="MVDYQARLRPVIRALEQNPDLSIETLASSACLSFYHFHRVFTAV AGETPGEMCRRLRIQRAAWQLCYSDASVTAIALGAGLASSQAFAKVFRRYYGCTPGEF RRDKSKNGHLMSKDGHALVLPNPYAEGHSSARSNTMKTTEMDARTLAYMRVTGPYGEG YDPVSRQLHQWASARGLEGGEWIFIYHDNPEVTPPAQCRTDIGVTVPAGTVGMGAVEI QLIPAGRYAQSRYLITDRSQYGPRWQEHIGDIVAAGLEFGNGPCFELYHSMSDDPVQD DVSFCSSLKG" misc_feature 282456..282707 /locus_tag="B565_0256" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:128636" misc_feature 282600..282710 /locus_tag="B565_0256" /note="Bacterial regulatory helix-turn-helix proteins, AraC family; Region: HTH_AraC; pfam00165" /db_xref="CDD:143933" misc_feature 282822..283217 /locus_tag="B565_0256" /note="Bacterial transcription activator, effector binding domain; Region: AraC_E_bind; cl01368" /db_xref="CDD:194113" gene complement(283356..283943) /locus_tag="B565_0257" /db_xref="GeneID:10486174" CDS complement(283356..283943) /locus_tag="B565_0257" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390909.1" /db_xref="GI:330827957" /db_xref="GeneID:10486174" /translation="MKRWIQHFYQLNRLNWLMVWLLLCCSIILLFPAGLMKGAVSQWA ADHAAWLGVGMLIAISYFCSQGFLIAWEWACEEWQARRQQDQLAQMIGFLDFNEKAVL REFVLQRKSVINLPITEPAVKNLMDAGVLTYAYGKPTREKDDENQIRALMIALPARPL LTYKVLGLSRGKMSDEQVEQIMNARPKFAQKGFQR" gene 284311..285297 /locus_tag="B565_0258" /db_xref="GeneID:10486175" CDS 284311..285297 /locus_tag="B565_0258" /codon_start=1 /transl_table=11 /product="Ca2+/Na+ antiporter" /protein_id="YP_004390910.1" /db_xref="GI:330827958" /db_xref="GeneID:10486175" /translation="MLITLLLFLVSAVTIYLACEYFVNGIEWTGHHFKLSQSATGSLL AALGTALPECIVTLTALLMGNTTAQQEIGIGAALGGPLVLATIGYAAVGLTLLLCMGR TERAIDGEVQREIGRDQRWFMGIFLVATALGLVAFTGKSWLALLFVLVYLVYVRRELK QSDSHEVELPEPLKLAPDAGIPPLGKVLLQTLAALVVVALAAQLFVHQLESMGELFGL SPVLAALLLSPVATEMPELMNVLIWVRQGKNRLALANISGAMMIQGSIPKAFCLLFTP WLLDGAMMASSLVTLLAVGLLWWGFRKGTMTAGRLALVGLLYLGFCSWLLVS" misc_feature 284311..285291 /locus_tag="B565_0258" /note="Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]; Region: ECM27; COG0530" /db_xref="CDD:30876" gene complement(285365..288217) /locus_tag="B565_0259" /db_xref="GeneID:10486176" CDS complement(285365..288217) /locus_tag="B565_0259" /codon_start=1 /transl_table=11 /product="Valyl-tRNA synthetase" /protein_id="YP_004390911.1" /db_xref="GI:330827959" /db_xref="GeneID:10486176" /translation="MEKTFNHNAIEQALYQHWEAQGYFKPHGDTSKDSFCIMIPPPNV TGSLHMGHAFQQTLMDTLIRYNRMQGKNTLWQAGTDHAGIATQMVVERKIAAEEGKTR HDYGRDAFIDKIWQWKEESGGTITRQMRRLGDSVDWERERFTMDEGLSAAVQEVFVRL YEDGLMYRGKRLVNWDPKLNTAISDLEVENREIKGHMWHLRYPLANGAKTAEGKDYLI VATTRPETMLGDTAVAVNPEDPRYKALIGQHILLPLVNRLIPIVADEHADMEKGTGCV KITPAHDFNDNEVGKRHSLPMINIFTLDAHVRAEAEVVDTNGNPSTAYDAALPAEFAG LERFAARKAILAKLEELGLLDEIKDHVLQQPYGDRGGVPIEPMLTDQWYVRVAPMAKT AIAAVEDGRIQFVPKQYENMYFSWMRDIQDWCVSRQLWWGHRIPAWYDDAGNVYVGRS EDEVRAKHSIPSVTTLRQDEDVLDTWFSSALWTFSTLGWPNNTEALKTFHPTDVLMSG FDIIFFWIARMIMMTMHFIKDENGQPQVPFKTVYITGLIRDEEGQKMSKSKGNVLDPL DMIDGISLEDLLEKRTGNMMQPQMAEKIAKRTAKQFPEGIDAHGTDALRFTLAALAST GRDINWDMKRLDGYNNFCNKLWNASRYVLMNTEDQDCGFNGGEMQFSLADRWIQSQLQ VAIRDFRTALDTYRFDIAAGVLYEFIWNQFCDWYLELTKPVLTKGSEAEQRAARHTLV TVLETLLRLAHPIIPFITETIWKSVAPLAGVHADTIMIQAFPEFDAAKVDEAAMADQE WVKEFIVSIRNIRAEMNVAPSVPLNVLLQCDAKDAQRAADNEAFLKSLARLESIRVLA DGETAPLSVKKLIGATELMIPMAGLIDKDAELARLAKEVARLVGECGRIEGKLGNEAF VAKAPEAVIAKEREKLEDYRLQLTKLEAQQAEIAAL" misc_feature complement(285371..288217) /locus_tag="B565_0259" /note="valyl-tRNA synthetase; Reviewed; Region: valS; PRK05729" /db_xref="CDD:180225" misc_feature complement(<287645..288121) /locus_tag="B565_0259" /note="catalytic core domain of valyl-tRNA synthetases; Region: ValRS_core; cd00817" /db_xref="CDD:185677" misc_feature complement(288062..288073) /locus_tag="B565_0259" /note="HIGH motif; other site" /db_xref="CDD:185677" misc_feature complement(286328..>287119) /locus_tag="B565_0259" /note="catalytic core domain of valyl-tRNA synthetases; Region: ValRS_core; cd00817" /db_xref="CDD:185677" misc_feature complement(order(286553..286555,286577..286588, 286673..286675,286685..286690,286694..286699, 286781..286783,286790..286792)) /locus_tag="B565_0259" /note="active site" /db_xref="CDD:185677" misc_feature complement(286544..286558) /locus_tag="B565_0259" /note="KMSKS motif; other site" /db_xref="CDD:185677" misc_feature complement(285932..286330) /locus_tag="B565_0259" /note="Anticodon-binding domain of valyl tRNA synthetases; Region: Anticodon_Ia_Val; cd07962" /db_xref="CDD:153416" misc_feature complement(order(286055..286057,286064..286069, 286091..286093,286112..286114,286121..286123, 286265..286270,286274..286279,286286..286291, 286298..286303,286307..286309,286316..286321, 286325..286327)) /locus_tag="B565_0259" /note="tRNA binding surface [nucleotide binding]; other site" /db_xref="CDD:153416" misc_feature complement(order(286055..286057,286064..286069, 286079..286081,286265..286270,286274..286279, 286286..286288)) /locus_tag="B565_0259" /note="anticodon binding site; other site" /db_xref="CDD:153416" misc_feature complement(285374..285571) /locus_tag="B565_0259" /note="Valyl tRNA synthetase tRNA binding arm; Region: Val_tRNA-synt_C; pfam10458" /db_xref="CDD:151031" gene complement(288283..288738) /locus_tag="B565_0260" /db_xref="GeneID:10486177" CDS complement(288283..288738) /locus_tag="B565_0260" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit chi" /protein_id="YP_004390912.1" /db_xref="GI:330827960" /db_xref="GeneID:10486177" /translation="MSQVTFYLMSEQDDAQASAVERLACTLAAESWGAGHIYLFCNDE AQALRLDELLWQLPPERFVPHQLQGESGQAPVEIGHQPPRRRYARLINLAKQTPLFAG HFAQVVDFVPTDETQKQQARERYKHYRQAGHALEMRDQPVLAAPDPAQP" misc_feature complement(288328..288738) /locus_tag="B565_0260" /note="DNA polymerase III chi subunit, HolC; Region: DNA_pol3_chi; cl01106" /db_xref="CDD:194036" gene complement(288913..290421) /locus_tag="B565_0261" /db_xref="GeneID:10486178" CDS complement(288913..290421) /locus_tag="B565_0261" /codon_start=1 /transl_table=11 /product="cytosol aminopeptidase PepA" /protein_id="YP_004390913.1" /db_xref="GI:330827961" /db_xref="GeneID:10486178" /translation="MEFSVKSGSPEKQRSACVVVGVFEPRRLSPVAEQLDKISDGYIS SLLRRGDLEGKPGQMLLLHQVPGVLSERVLLVGCGKERELDERQYKQIINKTITTLNE TGSMEAVCFLTELHVKGRDTYWKVRQAVETTKAGLYSFDQFKTNKAEPRRPLRKLVFN VPTRRELTIGEKAIAHGLAVAKGVRVCRDVANMPPNVCNPAYLASQARRLADAYDNIT TKVVGEQEMAELGMNSYLAVARGSDNEAMMAIIEYKGHPDAKPIVLVGKGLTFDSGGI SIKPADGMDEMKYDMGGAASVLGTMHALAQLQLPINVIGVLAGCENMPGGNAYRPGDI LTSMSGQTIEVLNTDAEGRLVLCDALTYVDRFDPETVIDVATLTGACVIALGHHTSGL LANHNPLAHELLNASEQAGDRAWRLPLFDEYQEQIDSPFADMANIGGRPAGTITAAAF LSRFTKKYNWAHLDIAGTAWKSGKDKGSTGRPVPLLTQFLLNRAGVDIEEKE" misc_feature complement(288940..290421) /locus_tag="B565_0261" /note="multifunctional aminopeptidase A; Provisional; Region: PRK00913" /db_xref="CDD:179165" misc_feature complement(288952..290379) /locus_tag="B565_0261" /note="Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein...; Region: Peptidase_M17; cd00433" /db_xref="CDD:48344" misc_feature complement(order(288994..288996,289087..289089, 289093..289098,289123..289125,289129..289131, 289144..289149,289153..289155,289168..289170, 289174..289179,289255..289257,289264..289278, 289384..289386,289396..289398,289402..289404, 289420..289434,289438..289440,289444..289455, 289459..289461,289555..289560,289567..289569, 289576..289578,289591..289593,289609..289611, 289693..289695,289699..289701,289834..289842, 289846..289848,290161..290163,290206..290208, 290233..290235,290272..290277)) /locus_tag="B565_0261" /note="interface (dimer of trimers) [polypeptide binding]; other site" /db_xref="CDD:48344" misc_feature complement(order(289291..289293,289363..289365, 289369..289371,289375..289377,289552..289554, 289585..289587,289606..289608,289621..289623)) /locus_tag="B565_0261" /note="Substrate-binding/catalytic site; other site" /db_xref="CDD:48344" misc_feature complement(order(289369..289371,289375..289377, 289552..289554,289606..289608,289621..289623)) /locus_tag="B565_0261" /note="Zn-binding sites [ion binding]; other site" /db_xref="CDD:48344" gene 290618..291706 /locus_tag="B565_0262" /db_xref="GeneID:10486179" CDS 290618..291706 /locus_tag="B565_0262" /codon_start=1 /transl_table=11 /product="putative permease" /protein_id="YP_004390914.1" /db_xref="GI:330827962" /db_xref="GeneID:10486179" /translation="MFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAADGEVPTRLVST LLLLNLPNMALLMLPISLFLAILFAHGRLYAESEMTVMHAVGFSHRFVMRSAMLLALL TAVVAAFNTGWIAPQAKEREYQVIDEFKADPGISFLQAGRFMDLDKGRLVAYIQDLND NGSKLQKIFVLQRAEGNNPPSVVVATEGVVTVDENGLQWLTLMDGSRYEGNFSGKQFQ ISDFREYGLVIRQQEMERSNRKAAAKPTMELFGTQDNAMMAELQWRISLPLSIPVLTL LVVPLARVNPRQGRYAKLLPAIMLYLSYFLLLSAARSAIDSGRLPYWPGMFLVPLGYL LFIGLPLNLQGTSWWNGVKGRYFNRKSA" misc_feature 290618..291625 /locus_tag="B565_0262" /note="Predicted permease YjgP/YjgQ family; Region: YjgP_YjgQ; pfam03739" /db_xref="CDD:190734" misc_feature 290624..291682 /locus_tag="B565_0262" /note="Predicted permeases [General function prediction only]; Region: COG0795; cl12074" /db_xref="CDD:189246" gene 291732..292802 /locus_tag="B565_0263" /db_xref="GeneID:10486180" CDS 291732..292802 /locus_tag="B565_0263" /codon_start=1 /transl_table=11 /product="putative permease" /protein_id="YP_004390915.1" /db_xref="GI:330827963" /db_xref="GeneID:10486180" /translation="MFGILDRYIGRVIFMSILLCEITLVGLAGLIKYVEQLKSVGDGN YDMINALYYVLLSMPKEAVLFFPLAALLGGLIGLGQLATSSELVVMQAAGRSKISIVM AALKTAIPLMIMVGLMGEYVAPIAKRMADDIKAGALSEGRLTVSAYGVWARDGNNFVN INGVRNDGALTGITLYRFTPERKLIDVVQAQEGVFERHHWLLKQTQVTRFDDPAQIRS EQHDKMEWSSELTPKQLGVVSIDPENLSVSGLLDYIGYLDANKQDAGRYKLEMWRKLL SPLSVVAMILLASSFIFGPLRSVSMGARMLMGIMTGFAVYVSDRVFGPISLVYAVPPI LAAIAPSLLFGGISFYILSRKQ" misc_feature 291732..292799 /locus_tag="B565_0263" /note="Predicted permeases [General function prediction only]; Region: COG0795; cl12074" /db_xref="CDD:189246" misc_feature 291750..292793 /locus_tag="B565_0263" /note="Predicted permease YjgP/YjgQ family; Region: YjgP_YjgQ; pfam03739" /db_xref="CDD:190734" gene complement(292877..293410) /locus_tag="B565_0264" /db_xref="GeneID:10486181" CDS complement(292877..293410) /locus_tag="B565_0264" /codon_start=1 /transl_table=11 /product="Proline-rich antigen" /protein_id="YP_004390916.1" /db_xref="GI:330827964" /db_xref="GeneID:10486181" /translation="MAKPKKVQQKSPSPATQPYPSAGLLRRLGALIYDALVVTSLLII AGFIGMGVAKLLLVTGMASVPAGEDTVWLLTRHHLSLIYTLWLAFVICGFYAWFWTRA GQTVGMRAWRLRIQNEDGSHIRVTQALIRLATAAFGLGNLMCLFNRQRPRAFQDIWAE CEVIVLSKEANLELLNK" misc_feature complement(292934..293347) /locus_tag="B565_0264" /note="RDD family; Region: RDD; cl00746" /db_xref="CDD:193923" gene 293554..293639 /locus_tag="B565_t009" /db_xref="GeneID:10486182" tRNA 293554..293639 /locus_tag="B565_t009" /product="tRNA-Leu" /db_xref="GeneID:10486182" gene complement(293877..294500) /locus_tag="B565_0265" /db_xref="GeneID:10489994" CDS complement(293877..294500) /locus_tag="B565_0265" /codon_start=1 /transl_table=11 /product="PepSY-associated TM helix family" /protein_id="YP_004390917.1" /db_xref="GI:330827965" /db_xref="GeneID:10489994" /translation="MKRRRVPLHNNKWVRRLHAWAGFFTLALMLMYGITGLWLQHRAV LPIPGPHTDKSSEEIVLKAPLASPEQLKILLQQRYPDTFADGRTMITPAQTLPTPNGP LTLPAKWEMRGVTLSQSVAASYVEGTLLVRTDLQLANFAASLNRLHRGMGTGLGWQLF GDIAALALLLLALTSLFMWTKLHGTPRAIIALTLAGSLGTLLFALLG" misc_feature complement(293940..294470) /locus_tag="B565_0265" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3295" /db_xref="CDD:33104" gene complement(294565..296607) /locus_tag="B565_0266" /db_xref="GeneID:10486183" CDS complement(294565..296607) /locus_tag="B565_0266" /codon_start=1 /transl_table=11 /product="outer membrane receptor protein" /protein_id="YP_004390918.1" /db_xref="GI:330827966" /db_xref="GeneID:10486183" /translation="MQHPHFRRTLVSLALLGTGFTAQATDETMTVVGKRSQHQEVATA TRTNTPAKLVPQTIDSVKVSELTAFGQPTLSEALSGIPGVNASGDTRFDGVNIRGFSA SNDFYLDGFRDDMQYTRDLGNIERVEVLKGPAAVLYGRGSTGGIVNRVSKKPQKGQES SVTARVGSFDSQRLAADLNGEASEQVQLRLNMAQEDKDSFRNGVKSKRTLLAPSANWE ISDNLNWLVQYERNEHDRTPDRGIPGVNGRPADVPREYVYSDTSRDFIDDVAQSTRSR LSWDINDQWQLRQQLGYSTLDSQFDNTYVTSVKGDKVTRSRWQQDLKAKNLISNTEAE GLFQTGPVEHRLLAGFEQNWQERTPKLYQNATAIPSGNLYDPGSLPTYNGAMKLSSDA KHKVRGNGLYLQDQLSLGDWHLVGGLRRDDFTVTSRRYDLNKEESVSVNSLSPRLGLV WNPLEDHAFYTSYSKTFTPVGGELIGITPGDKNNGLEPQHTRLYEGGVKSDWLNGKLA TTLSLYRLEMYNKRTKDPLDPTKVILTGLQRTEGVELSARAELTDEIYLRGGFAIQDA EQVKADTDLQGKRPMNVSRQNGQLYLGYKSGEQGWFGETGVTAVGDRFADNANTTTLP GYARFDARAGYRWQQWEAELSAENLTDHEYFVSATSATQIMPGTPRQLSLTGTYRF" misc_feature complement(294568..296448) /locus_tag="B565_0266" /note="TonB-dependent siderophore receptor; Region: TonB-siderophor; TIGR01783" /db_xref="CDD:162535" misc_feature complement(294568..296439) /locus_tag="B565_0266" /note="TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel; Region: ligand_gated_channel; cd01347" /db_xref="CDD:73259" misc_feature complement(order(296155..296181,296215..296247, 296278..296292,296308..296325,296353..296382, 296410..296439)) /locus_tag="B565_0266" /note="N-terminal plug; other site" /db_xref="CDD:73259" misc_feature complement(order(295642..295644,295714..295716)) /locus_tag="B565_0266" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:73259" gene complement(296901..297938) /locus_tag="B565_0267" /db_xref="GeneID:10486184" CDS complement(296901..297938) /locus_tag="B565_0267" /codon_start=1 /transl_table=11 /product="Fucose 4-O-acetylase" /protein_id="YP_004390919.1" /db_xref="GI:330827967" /db_xref="GeneID:10486184" /translation="MRISSIECGRVLAILAVMTIHVSPFANPFNPALWGSGSWLWLSG TINQLCRFAVPLFFLCAGYFLQPRLSREAPLTVAWRYCRPLLLLWLVWSLVYLLVPFN PLDAVQQGYLASLRGQWQFQLGDPLNGWLVGGMIHLWFLPALIMAVALLALCYRLGRP SLAIWLGLGLYLLALLGGSYAKPLLGAEWPLLTRNGPFFSLLFVALGALLRQRQWQPD ARTGWQLLLVGVALYGCEAWALQHFAGVPLTRHDFLLGSLPWTIGLFGLLLANPEWGK GSWLERQAPKVLGIYCLHMMLVVWLFVFGPQGASILWEIAKVPLLLGSSLLAYRLMAA LPLAHRLLRTH" misc_feature complement(297024..297938) /locus_tag="B565_0267" /note="Predicted O-acyltransferase [General function prediction only]; Region: COG3274; cl00792" /db_xref="CDD:197413" misc_feature complement(297027..297932) /locus_tag="B565_0267" /note="Acyltransferase family; Region: Acyl_transf_3; pfam01757" /db_xref="CDD:190093" gene complement(298162..299016) /locus_tag="B565_0268" /db_xref="GeneID:10486185" CDS complement(298162..299016) /locus_tag="B565_0268" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase family protein" /protein_id="YP_004390920.1" /db_xref="GI:330827968" /db_xref="GeneID:10486185" /translation="MDSAHANPFSASSKSSSGFLERRDVPNLSSAAFVVANHRTGEVI SERNGNRVMPIASLTKLMTALVVLDANLRLNEMLTVTNADIDRIKGTGSRLAIGSRLS RAEMLHIALMSSENRAASALARHYPGGQRAFVEAMNAKARMLGMWNTRYADSTGLNPR NVSTAQDLAKLAAAAASYPLIRQYSTDEQSYVRTNKRQLHYLNSNRLIREGQWEFTLS KTGYIREAGRCLVLGTKVNREPVIMVLLNAETTNDRVADAKRIKTWLESSGRTTLAAN QSSMLTHQ" misc_feature complement(298201..298953) /locus_tag="B565_0268" /note="Beta-lactamase; Region: Beta-lactamase; cl01009" /db_xref="CDD:194006" misc_feature complement(298267..298941) /locus_tag="B565_0268" /note="D-alanyl-D-alanine carboxypeptidase; Region: Peptidase_S11; pfam00768" /db_xref="CDD:189710" gene complement(299332..300798) /locus_tag="B565_0269" /db_xref="GeneID:10486186" CDS complement(299332..300798) /locus_tag="B565_0269" /codon_start=1 /transl_table=11 /product="amino acid transporter-like protein" /protein_id="YP_004390921.1" /db_xref="GI:330827969" /db_xref="GeneID:10486186" /translation="MSAKKLKLGAFILMILTSVFGVTNIGIGFYRMGYAAIPMFVIGG LFFFIPFILMMIEFGTGFRKEAGGIFTWMRHSVSTRFAFIGLTMWFASYVIWMFGKAL SMWVPLSFMLFGRDITVIPVTLGTGIDFGPFILGVVAIALVATVTKLITLGSARFAKV AAIGGLSVVALNVLLLVGGVFTFAVSGMTLQEPFTQASLTASPNAAFNDIIPFLGFMV FAIFAYGGVEAMAGVADELEDPERDLKRGIFLSGAFIVLCYIIGFLAVGSIMRWSDFP AEGITSLSALFIIMLELGRHLGGEWLGQVFMRFAGLGMFLSYLGAFIALSYAPLRQFI TGTPSYFWPERFQRENENGVRIEALKVQAWVVCLFIAAKSIFTLINPEGAAALYELII TMTNVGMTLPYMFLIYAWYRYRNNPALGKDLIFFKSSSSVLLATIISLILVAFGNVFT VVAPFISGDISTGVWTIIGPLLFVVIAMRFKIKQEDAH" misc_feature complement(299359..300795) /locus_tag="B565_0269" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene complement(301234..302112) /locus_tag="B565_0270" /db_xref="GeneID:10486187" CDS complement(301234..302112) /locus_tag="B565_0270" /codon_start=1 /transl_table=11 /product="Drug/metabolite transporter (DMT) superfamily protein" /protein_id="YP_004390922.1" /db_xref="GI:330827970" /db_xref="GeneID:10486187" /translation="MLLTPISREPFPMSTTVFFAVLLAALLHASWNALVKIGEERLVG VSLVAIFSGLIAAVALLPMGLPSAAELPWLGLSVLLHIGYCLFLSHAYNQGDFGQIYP LARGSAPLLAMVLSALLLGDYPGYGGIIGACVLIMGVLLMAWRGGQQRLDSKAVRAAL ITAMFTATYTLSDGAGARAGGEPVRYTLWLFTCTGLAMLLVLLVHQKRNAWRQIRQYA LVGATGGAMSLLAYGIVIWAMTQAPIGVVAALRESSVLFAMLLSVWLLKEPLGRMRLT AAAIITGGVLLTRLGG" misc_feature complement(301249..302025) /locus_tag="B565_0270" /note="phosphonate utilization associated putative membrane protein; Region: phn_DUF6; TIGR03340" /db_xref="CDD:163219" misc_feature complement(301243..301566) /locus_tag="B565_0270" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene complement(302146..303072) /locus_tag="B565_0271" /db_xref="GeneID:10486188" CDS complement(302146..303072) /locus_tag="B565_0271" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390923.1" /db_xref="GI:330827971" /db_xref="GeneID:10486188" /translation="MIMVRLLFVLLLLLALPAHALSIAMVLWRGETAAEAGFRAELTR LGYQATITTYNADQDRTALATMLRQQMLPKLAEYDYIYTFGTTATTMTKSLVANRKPL IFNVVSDPVGADILSEDKTQNSMVAGVSNMVPMALQLANASEHLATGKRLLLPFNPRE QNTLLVADMLLNEAKRYQWQMVTWRMAPDPRRLDNELKRLQQDAKNDIVFLAADSYLL SIAPRLLNALNAAAIPTICSAELFVEHGCSVGTISSYEALGKMAAGIIHRHQQGTELQ DIPLQTDPHPKLVLGQLGNAITQESTPEKPKP" misc_feature complement(302203..302979) /locus_tag="B565_0271" /note="Type 1 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_1; cl10011" /db_xref="CDD:195943" gene complement(303187..304266) /locus_tag="B565_0272" /db_xref="GeneID:10486189" CDS complement(303187..304266) /locus_tag="B565_0272" /codon_start=1 /transl_table=11 /product="outer membrane porin" /protein_id="YP_004390924.1" /db_xref="GI:330827972" /db_xref="GeneID:10486189" /translation="MKKLTVVALALTAAFQAQAVEVYKNDTSMLDLYGRIYAGQFFGD KKENVDTANPNGTKDYSAKQGANQFVRFGAKAETQIQSGLKALAQYEVQMYINDSEKT LGKDGSTDNLRTRLAFAGVGADWGTVTFGRQKGAPGFLADWTDVSLSDGYGNEALGAK TDTFATNRAGSVLKYSGLFNGFQFDASYKFDGGQEEDKSSNKTSAADPAYGAAVAYTF PFNLSLGTAYNVGQRQEKNTEDAKLWLISAKFDNKAAYAALSYADGSDFVQSGTDHTG WEAALGYNFENGFGLMALWNKQEQEVTGGKKTDAIDYYTLGAQYKFNKNLRVIGEYRI NNLDSVAGKATANKDDFQLAARYDF" misc_feature complement(303190..304185) /locus_tag="B565_0272" /note="Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane. Individual 16-strand anti-parallel beta-barrels form a central pore, and trimerizes thru mainly hydrophobic interactions at the interface...; Region: gram_neg_porins; cd00342" /db_xref="CDD:30071" misc_feature complement(order(303190..303192,303196..303198, 303202..303204,303289..303291,303298..303303, 303754..303759,303763..303765,303871..303879, 303904..303918,303922..303927,303976..303987, 303991..303993,303997..304005,304009..304011, 304027..304041,304147..304155,304159..304161, 304177..304179,304183..304185)) /locus_tag="B565_0272" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:30071" misc_feature complement(order(303763..303765,303832..303834, 303922..303924,304054..304056,304162..304164)) /locus_tag="B565_0272" /note="eyelet of channel; other site" /db_xref="CDD:30071" gene 304488..305498 /locus_tag="B565_0273" /db_xref="GeneID:10486190" CDS 304488..305498 /locus_tag="B565_0273" /codon_start=1 /transl_table=11 /product="fructose-1,6-bisphosphatase, class II" /protein_id="YP_004390925.1" /db_xref="GI:330827973" /db_xref="GeneID:10486190" /translation="MRRELAIEFSRVTEAAALAGYKWLGRGDKNIADGAAVAAMRHIL NQIEIDGEIVIGEGEIDEAPMLYIGEKVGTGHGDAVDIAVDPIEGTRMTAMGQANALA VLAVGDKGSFLKAPDMYMEKLIVGPKAKGAIDLDQALELNLKSVAKALGKPLSRLTVI TLAKPRHDKAIKEMQGLGVRVFAIPDGDVAASILTCLPDSEVDMLYGIGGAPEGVISA AVIRALDGDMQARLVPRHRVKGDSPEVRALGEQEIARCEALGIDVNKVLKLEDMAKND NVIFSATGITKGDLLDGITSDGVMATTETLLIRGKSRTIRRIKSIHYLERKDSVVRDI IL" misc_feature 304488..305486 /locus_tag="B565_0273" /note="Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins [Carbohydrate transport and metabolism]; Region: GlpX; COG1494" /db_xref="CDD:31683" misc_feature 304494..305453 /locus_tag="B565_0273" /note="Bacterial fructose-1,6-bisphosphatase, glpX-encoded. A dimeric enzyme dependent on Mg(2+). glpX-encoded FPBase (FBPase class II) differs from other members of the inositol-phosphatase superfamily by permutation of secondary structure elements. The core...; Region: FBPase_glpX; cd01516" /db_xref="CDD:30132" misc_feature order(304584..304586,304653..304658,304740..304754, 305049..305051,305124..305126) /locus_tag="B565_0273" /note="putative active site [active]" /db_xref="CDD:30132" gene 305633..305884 /locus_tag="B565_0274" /db_xref="GeneID:10486191" CDS 305633..305884 /locus_tag="B565_0274" /codon_start=1 /transl_table=11 /product="proteinase inhibitor" /protein_id="YP_004390926.1" /db_xref="GI:330827974" /db_xref="GeneID:10486191" /translation="MECRSGCAACCIAPSISSAIPGMPDGKPAGVPCIQLDSALGCKI FGQPERPAVCGGFRPMMDVCGSHRAEAIWLIGELERLTT" gene complement(305955..307118) /locus_tag="B565_0275" /db_xref="GeneID:10486192" CDS complement(305955..307118) /locus_tag="B565_0275" /codon_start=1 /transl_table=11 /product="HemY protein" /protein_id="YP_004390927.1" /db_xref="GI:330827975" /db_xref="GeneID:10486192" /translation="MIRIIILVAVMVAGLIFGPQASGNKGYVLIALGNYTIESSVTSA VILAVLFYGALLIVEWLLGRVFGLRRKTLGWYGSRRRRKANQQTVAATLAMAEGHYSQ AEKLMIKGASNSDTPLLNYLSAAKAAQARGDDARRDQYLQKAQEENPKAELALTLTQT QLQIEQGQYDTALAMLESVYALNPRHPMVLDQLRQVHLARQDWSALCDLIPALHKVGK LTPKQEEDLLQQAWCGRLQQAAGSLETLKAVWQDLPRKLRLEPELLACYGDLLRQLGA DSEAATLWQEALRKQPMPQLLARLPKLKLDSYQPLLALLQKQQGQPDVDTALAQLYLL AGQLDDAQKLLEQEVERAPSAAAYHALGQLMDKRRLTNKANEYYRQALELAGI" misc_feature complement(305964..307118) /locus_tag="B565_0275" /note="Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]; Region: HemY; COG3071" /db_xref="CDD:32885" misc_feature complement(306753..307043) /locus_tag="B565_0275" /note="HemY protein N-terminus; Region: HemY_N; pfam07219" /db_xref="CDD:191703" gene complement(307129..308178) /locus_tag="B565_0276" /db_xref="GeneID:10486193" CDS complement(307129..308178) /locus_tag="B565_0276" /codon_start=1 /transl_table=11 /product="Uroporphyrin-III C-methyltransferase" /protein_id="YP_004390928.1" /db_xref="GI:330827976" /db_xref="GeneID:10486193" /translation="MTEQQESQVKPQPTAAVNGSKSRSGAVLGGVAILLALGLTGGLY LHGHKNAVAQQAELAQLKQQLASALSKIDQTSSKDAEQLAALDQTQQRLQGEMQGLQN RVLDLNDKRPNDWMLAESEYLVRMAGRKLWLEHDLVSAITLLGNADERIAALNDPSLM PIRKALAEDIAKLKGMPRIDREGLTLKLAALSDQIELLPLSTVSMPEAKAEPDQAVST NPDEWESNLKKNWVKFTENFVTIRRRDGAVEALLSPQQEIFLRENLKTKLLQAQLSVY REQQALYEDSLDKAQRWLTQYFDTDNSATRYMQGEIDKLKGEQIQIDYPAQFKTQAML EQVLTERLQRILASS" misc_feature complement(307147..>307953) /locus_tag="B565_0276" /note="HemX; Region: HemX; cl14667" /db_xref="CDD:187421" gene complement(308175..308909) /locus_tag="B565_0277" /db_xref="GeneID:10486194" CDS complement(308175..308909) /locus_tag="B565_0277" /codon_start=1 /transl_table=11 /product="Uroporphyrinogen-III synthase" /protein_id="YP_004390929.1" /db_xref="GI:330827977" /db_xref="GeneID:10486194" /translation="MTPLVVRPAAQATELVQLLRRHGHAPLCCPLLETVAGSELPLLP DLLRSADAVIAVSIHAVHFAHDFLLQTGQTWPHIEYFAVGQASADAFAAIGITASCPD DPRSEGLLALPALQQVAGKRVLILRGNGGRDLIASTLASRGALVHYCAAYERHYPELD GDTLTRHWQAAGLDSLLITSGELLQRLLELVPTSQQPWLFDRLLVVPSPRVAEMASAA GFIHITIAQGASNQALTAALELRKME" misc_feature complement(308190..308909) /locus_tag="B565_0277" /note="uroporphyrinogen-III synthase; Reviewed; Region: hemD; PRK05928" /db_xref="CDD:180313" misc_feature complement(308196..308900) /locus_tag="B565_0277" /note="Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations...; Region: HemD; cd06578" /db_xref="CDD:119440" misc_feature complement(order(308361..308375,308448..308450, 308454..308456,308526..308528,308652..308654, 308733..308741,308889..308891)) /locus_tag="B565_0277" /note="active site" /db_xref="CDD:119440" gene complement(308906..309898) /locus_tag="B565_0278" /db_xref="GeneID:10486195" CDS complement(308906..309898) /locus_tag="B565_0278" /codon_start=1 /transl_table=11 /product="Porphobilinogen deaminase" /protein_id="YP_004390930.1" /db_xref="GI:330827978" /db_xref="GeneID:10486195" /translation="MKARAKGGNIDFLLKMKQLIDMAARTLKIATRKSPLALWQANFV KDRLEALHPQLQVELVPMSTQGDKILDTPLAKVGGKGLFVKELETAMLEGRADIAVHS MKDVPVEFPEGLGLHTICEREDPRDAFVSNRFKAIAELPQGAVVGTSSLRRQCQLRAA RPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRITAFIEPEQSLPANG QGAVGIECRLDDVELHALLAPLEHTETRARVLTERAMNRALQGGCQVPIGAYALVEGE QIWLRGLVGSPDGTQVIRDEIRGPLADGEALGEQLAQRLLAAGADEILAEVYRA" misc_feature complement(308948..309826) /locus_tag="B565_0278" /note="porphobilinogen deaminase; Reviewed; Region: hemC; PRK00072" /db_xref="CDD:178840" misc_feature complement(308948..309820) /locus_tag="B565_0278" /note="Hydroxymethylbilane synthase (HMBS), also known as porphobilinogen deaminase (PBGD), is an intermediate enzyme in the biosynthetic pathway of tetrapyrrolic ring systems, such as heme, chlorophylls, and vitamin B12. HMBS catalyzes the conversion of...; Region: HMBS; cd00494" /db_xref="CDD:29604" misc_feature complement(order(309017..309019,309023..309025, 309032..309034,309041..309043,309056..309058, 309092..309094,309098..309100,309110..309112, 309131..309133,309140..309145,309155..309157, 309164..309166,309185..309187,309239..309262, 309308..309313,309320..309322,309383..309385, 309422..309424,309434..309439,309443..309445, 309518..309535,309539..309544,309569..309571, 309575..309592,309782..309784,309797..309799)) /locus_tag="B565_0278" /note="domain interfaces; other site" /db_xref="CDD:29604" misc_feature complement(order(309110..309112,309239..309244, 309251..309253,309308..309310,309317..309319, 309326..309334,309371..309373,309392..309394, 309440..309445,309449..309457,309584..309589, 309593..309595,309779..309781,309791..309793)) /locus_tag="B565_0278" /note="active site" /db_xref="CDD:29604" gene 310237..312678 /locus_tag="B565_0279" /db_xref="GeneID:10486196" CDS 310237..312678 /locus_tag="B565_0279" /codon_start=1 /transl_table=11 /product="adenylate cyclase" /protein_id="YP_004390931.1" /db_xref="GI:330827979" /db_xref="GeneID:10486196" /translation="MSRYGQQVFQLLPVMLHFNHPLLPGYVSGDVPHGIWSFSATAEQ QAFIDDLCRNANCQSGLATHDRAIQGLYSMGSTSSIGQCCHSDLDIWVCHVAGLSQER LDLLELKCQQLSKWAEQRGVDLNFFLIPEDKFRQTNDAQMQGESCGSAQHLLLLDEFY RSAMRIAGKRLIWYLVPTECDDHYDAYVNELFESGKLRQDDWLDLGSFDRIPAEEYFG SALWQLYKGIDSPYKAVLKSVLMEAYSHEYPNTRLLSMIGRDWFQHNEGMHYRLDNYC LMLDKVTNYLKSIGDMARLDLVRRCFYLKVCDGLSHPKDDHSPEWRREQMSQLVSYWG WSQDKLYQLDHRHEWKIEEVKIAHAELLEALMQSYRNLIQFARRNNISESINPEDIGI LSRKLYAAFESLPGKVQRINLKIAPDLSEPDLSFVQVPHGRLNRAGWYLYKHSLEPVD IIGRAPLEFNGYISKLVSWAYFNDLLTPQSRVHLFNQGSDLHIDNLHQFCRDLSGCFP EKYPLATNLALSRPCEIRQLSIFLNLEMDPTSHWVGQVIEFDANTVDVFSFGRNQECL VGSVDLVYRNSWSEIRTLHFQGDEAVVDALTTILGKMHQDAAAPEMIEVFCYSQHFRS LVRSRFQTLVAECIDLRLARDKQQLVKTMALGREKYGIFFERRGVSVKKLENAIDFYR HISHNKLDHLPLRLDKTHSQHLPSIVDAYASEGLVQFFFDTRDAGTNIYILDEANRVE IYQHFAGNKDELVAGVNRFYTSNHERFSDDGQFINFNLPQYYEIVQVNGELDVIPYRS QGTLREQVPPAREVG" misc_feature 310237..312633 /locus_tag="B565_0279" /note="adenylate cyclase; Provisional; Region: cyaA; PRK09450" /db_xref="CDD:181866" misc_feature 310237..310758 /locus_tag="B565_0279" /note="Adenylate cyclase NT domain; Region: Adenyl_cycl_N; pfam12633" /db_xref="CDD:193111" misc_feature 310837..312630 /locus_tag="B565_0279" /note="Adenylate cyclase, class-I; Region: Adenylate_cycl; pfam01295" /db_xref="CDD:189931" gene complement(312745..313398) /locus_tag="B565_0280" /db_xref="GeneID:10486197" CDS complement(312745..313398) /locus_tag="B565_0280" /codon_start=1 /transl_table=11 /product="carboxylesterase 2" /protein_id="YP_004390932.1" /db_xref="GI:330827980" /db_xref="GeneID:10486197" /translation="MIDLHPQGARHAVIWLHGLGDSGAGLAPLVDALDLPAELPVRHL LPDAPERPITINMGYKMRGWYDIRSFEDPTERAVESHVRESANQIAVLLDQLVADGFA PEHIVLAGFSQGGVIASFTALRYQATLAGLLCMSTYLAAPDKLLGEMSEAARTLPICY MHGIYDDVVSLSLGWDAKNRLEAAGLAPEWHEYPMRHEICRPQLGDIRSWLLARLGA" misc_feature complement(312754..313374) /locus_tag="B565_0280" /note="Phospholipase/Carboxylesterase; Region: Abhydrolase_2; pfam02230" /db_xref="CDD:190253" gene complement(313395..313709) /locus_tag="B565_0281" /db_xref="GeneID:10486198" CDS complement(313395..313709) /locus_tag="B565_0281" /codon_start=1 /transl_table=11 /product="protein cyaY" /protein_id="YP_004390933.1" /db_xref="GI:330827981" /db_xref="GeneID:10486198" /translation="MKDHEYHALTDAFFQYVEDTLDEGYPDIDCERNGGVLTLSFENK TKVIINKQEPLHQIWVATRENGFHFELQDDTWIDNRFGHELKALLSQSCTAQAGEEVV FP" misc_feature complement(313401..313709) /locus_tag="B565_0281" /note="Frataxin is a nuclear-encoded mitochondrial protein implicated in Friedreich's ataxia (FRDA), an human autosomal recessive neurodegenerative disease; Frataxin is found in eukaryotes and in purple bacteria; lack of frataxin causes iron to accumulate in...; Region: Frataxin; cd00503" /db_xref="CDD:29607" misc_feature complement(order(313623..313625,313629..313631, 313641..313646,313653..313655,313665..313667, 313674..313679,313701..313703)) /locus_tag="B565_0281" /note="putative iron binding site [ion binding]; other site" /db_xref="CDD:29607" gene 313992..315242 /locus_tag="B565_0282" /db_xref="GeneID:10486199" CDS 313992..315242 /locus_tag="B565_0282" /codon_start=1 /transl_table=11 /product="diaminopimelate decarboxylase" /protein_id="YP_004390934.1" /db_xref="GI:330827982" /db_xref="GeneID:10486199" /translation="MDHFNYDADGQLQAEQTSLQQLAEQYGTPLYVYSRATLERHWHA FDKAAGDIPHLICYAVKANSNLALLNLLARLGSGFDIVSGGELSRVLAAGGDPAKVVF SGVAKSEAEMRLALEKEILCFNLESEAELERLNRVAGNMGKKARVSVRVNPDIDAGTH PYISTGLKQNKFGIPIELAPAIYRKAAAMANIEIVGVDCHIGSQLTELNPFMEAADKL LRLIDGLAAEGIHIHHLDVGGGLGVNYGSEQPPHPTEYAEALKQKLAGRDLTLLFEPG RAIVANAGVLLTRVEYLKPGETRNFALIDAGMNDMLRPSLYGAWMNIIEVDSRAGHAP AIYDVVGPVCETGDFLGKERTLAIAEGSLLAVRSAGAYGFTMSSNYNTRPRAAEVLVD GAEAHLIREREQLADLWRGEHLLP" misc_feature 314001..315227 /locus_tag="B565_0282" /note="diaminopimelate decarboxylase; Region: lysA; TIGR01048" /db_xref="CDD:188105" misc_feature 314067..315164 /locus_tag="B565_0282" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase; Region: PLPDE_III_DapDC; cd06828" /db_xref="CDD:143501" misc_feature order(314166..314168,314172..314174,314229..314231, 314298..314300,314439..314441,314583..314585, 314589..314591,314598..314600,314706..314711, 314811..314822,314928..314930,314940..314942, 315021..315023,315105..315107,315117..315119, 315129..315131) /locus_tag="B565_0282" /note="active site" /db_xref="CDD:143501" misc_feature order(314166..314168,314172..314174,314229..314231, 314298..314300,314439..314441,314583..314585, 314589..314591,314598..314600,314706..314711, 314811..314822,315021..315023,315105..315107) /locus_tag="B565_0282" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143501" misc_feature order(314172..314174,314589..314591,314598..314600, 314820..314822,314928..314930,314940..314942, 315021..315026,315105..315107,315117..315119, 315129..315131) /locus_tag="B565_0282" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143501" misc_feature order(314172..314174,315021..315023) /locus_tag="B565_0282" /note="catalytic residues [active]" /db_xref="CDD:143501" misc_feature order(314187..314192,314235..314240,314244..314249, 314304..314312,314322..314324,314367..314369, 314376..314378,314499..314510,314865..314867, 314871..314873,314892..314894,314898..314900, 315012..315029,315033..315035,315114..315122, 315126..315137,315144..315146) /locus_tag="B565_0282" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143501" gene 315428..316258 /locus_tag="B565_0283" /db_xref="GeneID:10486200" CDS 315428..316258 /locus_tag="B565_0283" /codon_start=1 /transl_table=11 /product="diaminopimelate epimerase" /protein_id="YP_004390935.1" /db_xref="GI:330827983" /db_xref="GeneID:10486200" /translation="MLIDFSKMHGLGNDFMVVDGVTQKVFFSNDVIKKLADRHFGIGF DQLLLVEPPYDPELDFHYRIFNADGSEVEQCGNGARCFARFVRLKGLINRDRIAVSTA RGRIVLQLEGENQVTVNMGVPQFEPGKIPFRAQKAEKTYLLRAQEHTVMCGVVSMGNP HCVIEVPSVADAPVETLGAIMERHERFPERVNVGFMEMVNATEIKLRVFERGCGETLA CGTGACAAAVIGISQGKLKERVTVSLPGGKLTIAWKGPGQPVYMTGPAEHVFDGQIEV " misc_feature 315428..316252 /locus_tag="B565_0283" /note="diaminopimelate epimerase; Provisional; Region: dapF; PRK00450" /db_xref="CDD:179032" misc_feature 315440..315802 /locus_tag="B565_0283" /note="Diaminopimelate epimerase; Region: DAP_epimerase; cl14668" /db_xref="CDD:187422" misc_feature 315890..316234 /locus_tag="B565_0283" /note="Diaminopimelate epimerase; Region: DAP_epimerase; cl14668" /db_xref="CDD:187422" gene 316350..317030 /locus_tag="B565_0284" /db_xref="GeneID:10486201" CDS 316350..317030 /locus_tag="B565_0284" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390936.1" /db_xref="GI:330827984" /db_xref="GeneID:10486201" /translation="MSELKRQEQSVDEATVLEYLARYPEFFQRHAAVLDRIRIPHERK GSVSLVERQLERQRERIEQLEQEITELMGIASENERIFRVYADLYGELYGCQTLFEVS AVMGKAFVQRLRLTGLRLWLNPKKFALSGPEQRFLAQGKQLESLLGQRLPGQDYYFGR LSQSEKQALFGHDVLVNSVALMRLGDLGVLAFASSDPGHFTPHNDTLLLGQLGRLLQL RLPELTHG" misc_feature 316368..316967 /locus_tag="B565_0284" /note="Protein of unknown function, DUF484; Region: DUF484; cl01228" /db_xref="CDD:186393" gene 317023..318000 /locus_tag="B565_0285" /db_xref="GeneID:10486202" CDS 317023..318000 /locus_tag="B565_0285" /codon_start=1 /transl_table=11 /product="Tyrosine recombinase XerC" /protein_id="YP_004390937.1" /db_xref="GI:330827985" /db_xref="GeneID:10486202" /translation="MARTPAKAPAKAPVIAPPLPAALADELAAFIEYLRVERQLSPHT RNNYQAHLEAMTAELVALGLTDWGRLEASQVRTLVTRMHKAGLAPRSLSTKVSALRSF CDWQVRQGRLTANPARGIVTPKQGRPLPKNLDVDEMHQLLNITDEQDPLAVRDRAIME LMYSSGLRLAELVGINLVDLKLDDRQLKVTGKGSRERVLPIGRMAVEWLQKWLKVRPL LAGDESEALFVSSRKQRLSARSVQARLDGWGNKQALNAHVHPHKLRHSFATHMLESSG DLRAVQELLGHADLSTTQIYTHLDFQHLAKVYDSAHPRAKRDPDAQDDE" misc_feature 317110..317967 /locus_tag="B565_0285" /note="site-specific tyrosine recombinase XerC; Reviewed; Region: xerC; PRK00236" /db_xref="CDD:178942" misc_feature 317110..317946 /locus_tag="B565_0285" /note="N- and C-terminal domains. XerD-like integrases are involved in the site-specific integration and excision of lysogenic bacteriophage genomes, transposition of conjugative transposons, termination of chromosomal replication, and stable plasmid...; Region: INT_XerDC; cd00798" /db_xref="CDD:29499" misc_feature order(317524..317526,317596..317598,317803..317805, 317812..317814,317881..317883,317908..317910) /locus_tag="B565_0285" /note="Int/Topo IB signature motif; other site" /db_xref="CDD:29499" misc_feature order(317524..317526,317803..317805,317812..317817, 317908..317910) /locus_tag="B565_0285" /note="active site" /db_xref="CDD:29499" gene 318033..318743 /locus_tag="B565_0286" /db_xref="GeneID:10486203" CDS 318033..318743 /locus_tag="B565_0286" /codon_start=1 /transl_table=11 /product="HAD superfamily hydrolase" /protein_id="YP_004390938.1" /db_xref="GI:330827986" /db_xref="GeneID:10486203" /translation="MHFYRRWQPVAAISFDLDDTLYDNGPAIVRAEQWMLNHLRSEYL ATAMLDKPRWLELKRSVLNGSPELRHDVSLARQQTIRAAMVEGGMADQQASREAEQVF AAFLAERSKIEVSESTHLLLARLAERYPLVVITNGNLDLVQAGLDRYFTLVCKAGAGA RMKPAPDMFEQTRSALKLPAERILHVGDHPETDVLGARLHGFRAAWLNERQQPWQQLQ LLPDVELMALEELAELLL" misc_feature 318051..318662 /locus_tag="B565_0286" /note="Predicted hydrolase (HAD superfamily) [General function prediction only]; Region: COG1011" /db_xref="CDD:31215" misc_feature 318345..318650 /locus_tag="B565_0286" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature 318435..318437 /locus_tag="B565_0286" /note="motif II; other site" /db_xref="CDD:119389" gene complement(318820..319218) /locus_tag="B565_0287" /db_xref="GeneID:10486204" CDS complement(318820..319218) /locus_tag="B565_0287" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390939.1" /db_xref="GI:330827987" /db_xref="GeneID:10486204" /translation="MLLTTLALAASMQFDCPATIETRQQLLTPQQGWQAFTRNDDGKP DETLSHRLDNLALFDGDPAELAQLKPDNGDSDEIHYWSQLDSSLRPLYLICRYQNSAI TLQQALPVGISYCRVNQRDRYTLLGLVCRK" gene complement(319264..320790) /locus_tag="B565_0288" /db_xref="GeneID:10486205" CDS complement(319264..320790) /locus_tag="B565_0288" /codon_start=1 /transl_table=11 /product="small conductance mechanosensitive ion channel (MscS) family transporter" /protein_id="YP_004390940.1" /db_xref="GI:330827988" /db_xref="GeneID:10486205" /translation="MAGENLTALPTLIWISEHPFWTLLTLSLMLLHFWRRPGQRRELL SELSFVMISAVVILLIQLEGGWFKLPLPHQLLIEISTLLAGLILVKIWGILLFEFLLP LCHVRIPRIIADIVITIGYIGWGLFRLYASGMALGEIVTTSAVITAVIAFAMQDTLGN LLAGVSIQLDNSIAIGDWLQVDTTQGRVVEINWRATTIETRNWETVVIPNSHLLKQRF TVLGRRRGEPLQWRRWVWFDLTLDTLPTQIIALIEKSLRETKLPCVAKHPQPDCLLMN VEGGIARYAVRYWLTDLARDDPTDSMVRSLIDAALRRNDRRLTPPIFNVFMAKEKQHL DARHKRHTAERTDTLRKLPLFAMLQENELLQLADQVKFAPFVSGDIMLEQGDVSSWLF VLVKGEAEMVVNVEGRELKLGTLNAGDFFGELSLLTGEPSSFTVRAVATVETYRINQA MFQELVMQREALVEPLYRVLSDRQQEQRALLEREAEAMKQPPQQLDLLDKLMKLFGGR " misc_feature complement(319768..320646) /locus_tag="B565_0288" /note="Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]; Region: MscS; COG0668" /db_xref="CDD:31012" misc_feature complement(319846..320460) /locus_tag="B565_0288" /note="Mechanosensitive ion channel; Region: MS_channel; pfam00924" /db_xref="CDD:144501" misc_feature complement(319390..319731) /locus_tag="B565_0288" /note="effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO...; Region: CAP_ED; cd00038" /db_xref="CDD:28920" misc_feature complement(order(319489..319497,319522..319527)) /locus_tag="B565_0288" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:28920" misc_feature complement(order(319405..319413,319423..319431)) /locus_tag="B565_0288" /note="flexible hinge region; other site" /db_xref="CDD:28920" gene 320906..321319 /locus_tag="B565_0289" /db_xref="GeneID:10486206" CDS 320906..321319 /locus_tag="B565_0289" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390941.1" /db_xref="GI:330827989" /db_xref="GeneID:10486206" /translation="MKFSKKIICLMALLPLAGCDLLAEKYRVEFRDGSWREIAITPFS SEARWREGCATGEVLSDMKVPIKRGDTVNGREQLLIGGEKFELDDNNLYRSNGMVFGH SPDHIQRGLKGMDICRTLRPERGGLPKLKARGFGD" gene complement(321332..322114) /locus_tag="B565_0290" /db_xref="GeneID:10486207" CDS complement(321332..322114) /locus_tag="B565_0290" /codon_start=1 /transl_table=11 /product="class I glutamine amidotransferase" /protein_id="YP_004390942.1" /db_xref="GI:330827990" /db_xref="GeneID:10486207" /translation="MPNPQPPATRKPVVLMTMGAQPRNGHAYQVMTHKYIMPLVEISG CVPLLVPTCCGTADLEQYLDLADGVYLSGAGSNIDPALYGQENLTPEKQQDRDRDLFD LPLIKGALARGLPLLGICRGMQEINVALGGDIHQKVYNEPGYDDHREDADDPVDEQYG PSHQIKLLPGSWFAELMGEEQIPVNSLHGQGINRLGKGLEPLAHAEDGLIEALHAPAL SPFLLAVQWHPEWKANENPHSIKIFQAFGHACRQRCALMAAS" misc_feature complement(321425..322081) /locus_tag="B565_0290" /note="Peptidase C26; Region: Peptidase_C26; pfam07722" /db_xref="CDD:116336" misc_feature complement(321374..322075) /locus_tag="B565_0290" /note="Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; Region: GATase1_2; cd01745" /db_xref="CDD:153216" misc_feature complement(order(321425..321427,321431..321433, 321755..321757)) /locus_tag="B565_0290" /note="catalytic triad [active]" /db_xref="CDD:153216" gene complement(322511..323035) /locus_tag="B565_0291" /db_xref="GeneID:10486208" CDS complement(322511..323035) /locus_tag="B565_0291" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390943.1" /db_xref="GI:330827991" /db_xref="GeneID:10486208" /translation="MSQYQDDNEFEDWGPSKSQLKRDAEALQKMGEEIVSLSHSELEK IPLDEELAEAVELGRKLKPKKDESFRRHLQFIGRLMRSRDIEPIAEALSIIKNRHSTV NARLHRLEQWRERLITEGDSALNELMSQFHELDRQKLRQLIRSANKERELNKPPVAYR EMYQYLRGEIEDLL" misc_feature complement(322523..323029) /locus_tag="B565_0291" /note="Protein of unknown function (DUF615); Region: DUF615; cl01147" /db_xref="CDD:194052" gene 323150..324493 /locus_tag="B565_0292" /db_xref="GeneID:10486209" CDS 323150..324493 /locus_tag="B565_0292" /codon_start=1 /transl_table=11 /product="Modulator of DNA gyrase PmbA" /protein_id="YP_004390944.1" /db_xref="GI:330827992" /db_xref="GeneID:10486209" /translation="MDQQDQIRQDQAHLEAVVAEALEIAKGLGASLAEVSISKQTGLS VNTRGCELESIEFNKDGALGIAVYRDGCKGSSSTTDLSKPAIRAAVEAAIEIARHTSA DDCAGLADAELLAWDAPDLQLCHQIELDPQRGIELAIECERLALGRDARIKHSDGAGF SSHLGIKVYGNSHGFVKGYAASRNSLSCVLIGEQDGDMQRDYGYSSSRTLDGLWSPQR IADEAVERTVSRLGARKISTRHAPVLFHPDTASGLWGHLVMAISGGNLYRKSSFLLDK LGKQILPEWLTIQEFPHLLGGLASTPFDGEGVRTRDMDIIRNGELVSWLLTSYSARKL GLTTTGHAGGIHNWQVSNTGQDFQGMLKEMGTGLLVTELMGQGVNIVNGDYSRGAAGF WVENGEIAYPVEEITIAGNLAEMFSHIVAVGRDEDERSSLKTGSVLVENMKLAGH" misc_feature 323150..324487 /locus_tag="B565_0292" /note="Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]; Region: TldD; cl00398" /db_xref="CDD:193802" misc_feature 323246..324121 /locus_tag="B565_0292" /note="Putative modulator of DNA gyrase; Region: PmbA_TldD; pfam01523" /db_xref="CDD:190021" gene complement(324581..325837) /locus_tag="B565_0293" /db_xref="GeneID:10486210" CDS complement(324581..325837) /locus_tag="B565_0293" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /protein_id="YP_004390945.1" /db_xref="GI:330827993" /db_xref="GeneID:10486210" /translation="MDKFKIDGRCTLNGEVTISGAKNAALPILFATLLCDEEVHLSNV PRLKDVGTTIKLLEMLGATTKVNGNVTVLTGAVNNHVAPYELVKTMRASILALGPLAA RFGAADVSLPGGCAIGARPVNLHVHGLELMGAKITIEDGYIKARVDGRLKGAHILMDM VSVTGTENLMMAATLADGRTVIENAAREPEVVDLANFLNTLGAKIQGAGTDTLTIDGV ERLHGGNYSVQPDRIETGTFLVGAAVTGGKITCRKTDPTLLEAVLVKLEEAGALIEKG EDWITLDMTGRTLKPVTIKTAPYPAFPTDMQAQFTVLNAVAKGTGMVTETIFENRFMH VPELVRMGADIELQGNVAICRDTEQLKGAQVMATDLRASASLVLAGFVAEGSTIVDRI YHIDRGYEDIEQKLQGLGGRIERIKG" misc_feature complement(324590..325837) /locus_tag="B565_0293" /note="UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated; Region: PRK09369" /db_xref="CDD:181804" misc_feature complement(324611..325804) /locus_tag="B565_0293" /note="UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall. The reaction is phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine =...; Region: UdpNAET; cd01555" /db_xref="CDD:30128" misc_feature complement(order(325145..325156,325775..325786)) /locus_tag="B565_0293" /note="hinge; other site" /db_xref="CDD:30128" misc_feature complement(order(324923..324925,325346..325351, 325358..325360,325463..325480,325553..325555, 325565..325567,325769..325771)) /locus_tag="B565_0293" /note="active site" /db_xref="CDD:30128" gene complement(325856..326113) /locus_tag="B565_0294" /db_xref="GeneID:10486211" CDS complement(325856..326113) /locus_tag="B565_0294" /codon_start=1 /transl_table=11 /product="BolA-like protein" /protein_id="YP_004390946.1" /db_xref="GI:330827994" /db_xref="GeneID:10486211" /translation="MQVSEIEAILLEALPLSEVHVKGDGSHYQVIAVGDMFDGMSRVK KQQAIYAPLMDKIASNAIHALSIKAFTDAEWKRERKFLLPS" misc_feature complement(325874..>326059) /locus_tag="B565_0294" /note="BolA-like protein; Region: BolA; cl00386" /db_xref="CDD:185958" gene complement(326113..326385) /locus_tag="B565_0295" /db_xref="GeneID:10486212" CDS complement(326113..326385) /locus_tag="B565_0295" /codon_start=1 /transl_table=11 /product="anti-anti-sigma factor family protein" /protein_id="YP_004390947.1" /db_xref="GI:330827995" /db_xref="GeneID:10486212" /translation="MTLSGELLAPQVNDLWQRRAEWWQDDQLELGGVTTLDSAGLALL VKWAKAVLARGATPQLVGASSDFYTLANLYGVAGLFQSTPLTTEDA" misc_feature complement(326140..326385) /locus_tag="B565_0295" /note="Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors; Region: STAS; cl00604" /db_xref="CDD:153881" gene complement(326382..327014) /locus_tag="B565_0296" /db_xref="GeneID:10486213" CDS complement(326382..327014) /locus_tag="B565_0296" /codon_start=1 /transl_table=11 /product="Toluene tolerance protein Ttg2D" /protein_id="YP_004390948.1" /db_xref="GI:330827996" /db_xref="GeneID:10486213" /translation="MFKKIALLLGLMTSMLFSLSAQAAVDATDPNALVDQAAKQTFAR LKADQAQVKSNPDHLRVIIREELLPYVDNRFAAYKVLGNQIKETTEAQRNAFVEVFTE YMVSSYADALAHFDKQTVKVEPGKAPSGNITAVNVSVKEAGKPDIFLEFKLRKNNKTG EWKAFDMVAEGISLLSAKQSELGGLIRQNGIDAVIAQLREHNAKPLVLKP" misc_feature complement(326388..327014) /locus_tag="B565_0296" /note="ABC-type transport system involved in resistance to organic solvents, auxiliary component [Secondary metabolites biosynthesis, transport, and catabolism]; Region: Ttg2D; cl01074" /db_xref="CDD:186320" misc_feature complement(326409..326915) /locus_tag="B565_0296" /note="Toluene tolerance, Ttg2; Region: Tol_Tol_Ttg2; pfam05494" /db_xref="CDD:191284" gene complement(327017..327514) /locus_tag="B565_0297" /db_xref="GeneID:10486214" CDS complement(327017..327514) /locus_tag="B565_0297" /codon_start=1 /transl_table=11 /product="Toluene tolerance protein TTG2C" /protein_id="YP_004390949.1" /db_xref="GI:330827997" /db_xref="GeneID:10486214" /translation="MKFSKVEFLVGTFMLAGIGAILALALQVAGLSFKPEGETYTLRA HFDNIGGLKVRSPVKVGGVVVGRVSDIVLDPQTQVPEVTLMMQKSAGQFADTSSLSIL TSGLLGEQYIGLAPGFSDEEMGTEMLKDGDLIEDTKSAIVLEDLIGKFLYSQSSDSKS DSKKE" misc_feature complement(327164..327400) /locus_tag="B565_0297" /note="mce related protein; Region: MCE; cl03606" /db_xref="CDD:186584" gene complement(327522..328301) /locus_tag="B565_0298" /db_xref="GeneID:10486215" CDS complement(327522..328301) /locus_tag="B565_0298" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="YP_004390950.1" /db_xref="GI:330827998" /db_xref="GeneID:10486215" /translation="MLISQISKLGRVGVRFISSVGRATIMLFHALAGKPEPRKHFPLL IQQLYVVGVQSVAIILVSGLFIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPV VTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAF MFSLIGIFGGKLVGVDWLGVDEGGFWSAMQASVDWHEDIMQGAIKSLIFALVVTWIAL FNGYDAKPTSAGISQATTRTVVHSSLAVLGLDFILTAVMFG" misc_feature complement(327525..328286) /locus_tag="B565_0298" /note="Domain of unknown function DUF140; Region: DUF140; cl00510" /db_xref="CDD:186046" gene complement(328301..329089) /locus_tag="B565_0299" /db_xref="GeneID:10486216" CDS complement(328301..329089) /locus_tag="B565_0299" /codon_start=1 /transl_table=11 /product="organic solvents resistance ABC transporter, ATPase component" /protein_id="YP_004390951.1" /db_xref="GI:330827999" /db_xref="GeneID:10486216" /translation="MNNDLITISDLTFSHGDRLLYDGINLTIPRGKVTAVMGPSGIGK TTLLRLIGGQLKPESGHILFDGEDIPTLSRSRLYEVRKRMSMLFQSGALFTGMTVYDN VAFPLREHSGLPEELIHTIVMMKLQAVGLRGAAKLMPSELSGGMARRAALARAIALDP DLIMYDEPFVGQDPITMAVLVKLIKELNDALGITSVIVTHDVKEVLSIADYAYIIANR KVVAHGTPDQLREEHNPEVEQFLKGLPDGPVPFHFPAGDLLQDL" misc_feature complement(328304..329083) /locus_tag="B565_0299" /note="putative ABC transporter ATP-binding protein YrbF; Provisional; Region: PRK11831" /db_xref="CDD:183331" misc_feature complement(328370..329074) /locus_tag="B565_0299" /note="ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex...; Region: ABC_Org_Solvent_Resistant; cd03261" /db_xref="CDD:73020" misc_feature complement(328955..328978) /locus_tag="B565_0299" /note="Walker A/P-loop; other site" /db_xref="CDD:73020" misc_feature complement(order(328490..328492,328589..328594, 328823..328825,328952..328960,328964..328969)) /locus_tag="B565_0299" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73020" misc_feature complement(328823..328834) /locus_tag="B565_0299" /note="Q-loop/lid; other site" /db_xref="CDD:73020" misc_feature complement(328637..328666) /locus_tag="B565_0299" /note="ABC transporter signature motif; other site" /db_xref="CDD:73020" misc_feature complement(328589..328606) /locus_tag="B565_0299" /note="Walker B; other site" /db_xref="CDD:73020" misc_feature complement(328571..328582) /locus_tag="B565_0299" /note="D-loop; other site" /db_xref="CDD:73020" misc_feature complement(328484..328504) /locus_tag="B565_0299" /note="H-loop/switch region; other site" /db_xref="CDD:73020" gene 329309..330304 /locus_tag="B565_0300" /db_xref="GeneID:10486217" CDS 329309..330304 /locus_tag="B565_0300" /codon_start=1 /transl_table=11 /product="putative sugar phosphate isomerase involved in capsule formation" /protein_id="YP_004390952.1" /db_xref="GI:330828000" /db_xref="GeneID:10486217" /translation="MSVKPEKVSELFDFRRSARAVLDTEKQAIDGLYQYLNDAFDKAC EMVLRCGGKIVVTGMGKSGHIGSKIAATLASTGTPAFFLHPGEASHGDLGMISSGDLI IAISNSGESDEILALLPVLKRRGIPLICMTGNPASTMAKEANVHLCIKVEKEACPLGL APTSSTTATLVMGDALAVALLEARGFTADDFALSHPGGSLGKRLLLRVGDLMHSGDLL PRVGIDATISQALLEVSRKGLGMTAVVDGNGLLAGLFTDGDLRRILDQQIDIHHTPIS RVMTANCVTVGPEMMAAEAVKLMETRKINGLLVVDEEKRPLGAFNMHDLLKAGVI" misc_feature 329342..330301 /locus_tag="B565_0300" /note="D-arabinose 5-phosphate isomerase; Provisional; Region: PRK10892" /db_xref="CDD:182814" misc_feature 329462..329845 /locus_tag="B565_0300" /note="KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-...; Region: SIS_Kpsf; cd05014" /db_xref="CDD:88409" misc_feature order(329492..329494,329624..329626) /locus_tag="B565_0300" /note="putative active site [active]" /db_xref="CDD:88409" misc_feature 329951..330292 /locus_tag="B565_0300" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with KpsF/GutQ domains in the API [A5P (D-arabinose 5-phosphate) isomerase] protein. These APIs catalyze the conversion of the pentose pathway...; Region: CBS_pair_KpsF_GutQ_assoc; cd04604" /db_xref="CDD:73104" gene 330304..330858 /locus_tag="B565_0301" /db_xref="GeneID:10486218" CDS 330304..330858 /locus_tag="B565_0301" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonate 8-phosphate phosphatase" /protein_id="YP_004390953.1" /db_xref="GI:330828001" /db_xref="GeneID:10486218" /translation="MQNVPTLYGPVTRSQFEKAAQIRLLVCDVDGVLSNGLIYMGNNG EELKTFCTRDGAGMRALLNAGIEIAIITGRNSRIVSDRMKSLGVAHVVQGADKKLPHF EALLAKLGLAAEQAAYMGDDTIDLPVMAACGLGIAVADAHPLVLSRADMVTRLGGGMG AVREVCDLILQAQGHDDYQPEASV" misc_feature 330319..330825 /locus_tag="B565_0301" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" gene 330855..331415 /locus_tag="B565_0302" /db_xref="GeneID:10486219" CDS 330855..331415 /locus_tag="B565_0302" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390954.1" /db_xref="GI:330828002" /db_xref="GeneID:10486219" /translation="MSRQTLLFALLFLVALVAWQLGKVELVPESAVKIENYQPDFVAK DLVTTRFDINGKRTERLESTYAEYYQILEQATFDKPVVYMYDDQGAAEWKVTAETGVL NTGDNVILRDKVHLDGLLPTSFISTLDTPYLELDLVTQDVRSNREVNILGRDFQTQGV GLKGHLDRKYFELLDQGHAIYFNEKR" misc_feature 330909..331397 /locus_tag="B565_0302" /note="Lipopolysaccharide-assembly, LptC-related; Region: LptC; pfam06835" /db_xref="CDD:148442" misc_feature 330942..331382 /locus_tag="B565_0302" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3117; cl01200" /db_xref="CDD:186380" gene 331387..331929 /locus_tag="B565_0303" /db_xref="GeneID:10486220" CDS 331387..331929 /locus_tag="B565_0303" /codon_start=1 /transl_table=11 /product="protein YhbN" /protein_id="YP_004390955.1" /db_xref="GI:330828003" /db_xref="GeneID:10486220" /translation="MPSISMKNANLALAALLLCGAVTAKESDFAEKVYVDAVKQVAEM QDNRITFEEDVTINQGTIRIKADKVVVTRSGEKGAEVMTAYGKPATFFQILDNGKPVN AHGNTIRYELKNRLVTITGNGQLKQEDSQVNGDLIRYDIVKQKMIAESKSPSQRVKTV FLPDQVENFDKPADQKKQGK" misc_feature 331456..331878 /locus_tag="B565_0303" /note="OstA-like protein; Region: OstA; cl00844" /db_xref="CDD:193952" gene 331933..332658 /locus_tag="B565_0304" /db_xref="GeneID:10486221" CDS 331933..332658 /locus_tag="B565_0304" /codon_start=1 /transl_table=11 /product="ABC transporter ATPase" /protein_id="YP_004390956.1" /db_xref="GI:330828004" /db_xref="GeneID:10486221" /translation="MAVLKAVGLQKSYKRRMVVSDVSLEVGTGQIVGLLGPNGAGKTT SFYMIVGLVQRDAGLITIDDQDISLQPMHVRARNGIGYLPQEASIFRRLSVFDNLMGV MQTRKGLSREEREDKVQQLLEEFNITHIRDNLGQSLSGGERRRVEIARALAAEPRFIL LDEPFAGVDPISVIDIKKIIQHLKDRGLGVLITDHNVRETLDVCEKAYIVSHGKMIAE GAPADILADEQVKRVYLGDQFSL" misc_feature 331933..332655 /locus_tag="B565_0304" /note="lipopolysaccharide ABC transporter ATP-binding protein; Provisional; Region: PRK10895" /db_xref="CDD:182817" misc_feature 331942..332640 /locus_tag="B565_0304" /note="The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in...; Region: ABC_YhbG; cd03218" /db_xref="CDD:72977" misc_feature 332038..332061 /locus_tag="B565_0304" /note="Walker A/P-loop; other site" /db_xref="CDD:72977" misc_feature order(332047..332052,332056..332064,332185..332187, 332416..332421,332515..332517) /locus_tag="B565_0304" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72977" misc_feature 332176..332187 /locus_tag="B565_0304" /note="Q-loop/lid; other site" /db_xref="CDD:72977" misc_feature 332344..332373 /locus_tag="B565_0304" /note="ABC transporter signature motif; other site" /db_xref="CDD:72977" misc_feature 332404..332421 /locus_tag="B565_0304" /note="Walker B; other site" /db_xref="CDD:72977" misc_feature 332428..332439 /locus_tag="B565_0304" /note="D-loop; other site" /db_xref="CDD:72977" misc_feature 332503..332523 /locus_tag="B565_0304" /note="H-loop/switch region; other site" /db_xref="CDD:72977" gene 332724..334163 /locus_tag="B565_0305" /db_xref="GeneID:10486222" CDS 332724..334163 /locus_tag="B565_0305" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma-54 factor" /protein_id="YP_004390957.1" /db_xref="GI:330828005" /db_xref="GeneID:10486222" /translation="MKPTLQLRLGQSLTMTPQLQQAIRLLQLSTLELQQEIQQALENN PLLEQEESEAQETSPEAPVDASQLDSSDAMAQEQMPDELPVDTTWDEVYSAGTAQSAG PIHDGEDSVYQGETTENLQDYLLWQMRLTPFSDVDAAIALAIIDAIDESGYLTVALED IQAAVTSDDVEVELDEVEAVLKRVQHFDPVGIAARSVQECLLIQLDQYDPQTPWLNEA KEVILEHMELLGNRDYRTLARKTKLKESDLKEVLDLIQLLEPRPGNGIIQSDSQYVIP DVSVVKKGSKWVVELNPDSAPRIRVNETYAAMARNARSSTDTQFIRSHLQEAKWFIKS LESRNDTLLKVASCIVEQQQGFFEYGEEAMKPMVLNDIAEAVEMHESTISRVTTQKYM HTPRGIFELKFFFSSHVNTEGGGECSSTAIRALIKKLVTAENPAKPLSDSKIADLLAE QGIMVARRTIAKYRESLFIPPSNQRKRLV" misc_feature 332724..334157 /locus_tag="B565_0305" /note="RNA polymerase factor sigma-54; Reviewed; Region: PRK05932" /db_xref="CDD:180314" misc_feature 332730..332876 /locus_tag="B565_0305" /note="Sigma-54 factor, Activator interacting domain (AID); Region: Sigma54_AID; pfam00309" /db_xref="CDD:189497" misc_feature 333039..333641 /locus_tag="B565_0305" /note="Sigma-54 factor, core binding domain; Region: Sigma54_CBD; pfam04963" /db_xref="CDD:147239" misc_feature 333675..334154 /locus_tag="B565_0305" /note="Sigma-54, DNA binding domain; Region: Sigma54_DBD; pfam04552" /db_xref="CDD:113327" gene 334184..334471 /locus_tag="B565_0306" /db_xref="GeneID:10486223" CDS 334184..334471 /locus_tag="B565_0306" /codon_start=1 /transl_table=11 /product="ribosomal subunit interface protein" /protein_id="YP_004390958.1" /db_xref="GI:330828006" /db_xref="GeneID:10486223" /translation="MQINLTGHHVEITEALRDYVNNKFAKLERHFDHINNVHVVLSVE KLNQIAEAKLHVSGGEVFANSEHADMYAAIDTLLDKLDRQIIKHKDKLNKK" misc_feature 334187..334456 /locus_tag="B565_0306" /note="RaiA ('ribosome-associated inhibitor A', also known as Protein Y (PY), YfiA, and SpotY, is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site...; Region: RaiA; cd00552" /db_xref="CDD:29642" misc_feature order(334193..334195,334199..334201,334205..334207, 334259..334261,334268..334270,334286..334291, 334301..334303,334313..334315,334340..334342, 334349..334360,334367..334369,334373..334375, 334382..334384,334388..334390,334397..334399, 334439..334444,334454..334456) /locus_tag="B565_0306" /note="30S subunit binding site; other site" /db_xref="CDD:29642" gene 334474..334920 /locus_tag="B565_0307" /db_xref="GeneID:10486224" CDS 334474..334920 /locus_tag="B565_0307" /codon_start=1 /transl_table=11 /product="PTS IIA-like nitrogen-regulatory protein PtsN" /protein_id="YP_004390959.1" /db_xref="GI:330828007" /db_xref="GeneID:10486224" /translation="MQLEHILSRDCTKSAVPCTSKKRALEIISELAAERLGTSRQALF ECLLAREKMGSTGIGAGIAIPHGRIDDEFPPTAILMTFADPIPFDSIDNQPVDLLFAL LVPESECKQHLKTLSLMASKLGDKAVCRQLRQATSDEELYQIMTSA" misc_feature 334492..334905 /locus_tag="B565_0307" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cd00211" /db_xref="CDD:29266" misc_feature order(334621..334623,334669..334671) /locus_tag="B565_0307" /note="active site" /db_xref="CDD:29266" misc_feature 334669..334671 /locus_tag="B565_0307" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29266" gene 334966..335832 /locus_tag="B565_0308" /db_xref="GeneID:10486225" CDS 334966..335832 /locus_tag="B565_0308" /codon_start=1 /transl_table=11 /product="nucleotide-binding protein" /protein_id="YP_004390960.1" /db_xref="GI:330828008" /db_xref="GeneID:10486225" /translation="MQLIVVSGRSGSGKTVALRVLEDLGYYCVDNLPVNLLPQLIVSV ESQYDKLAVSIDVRNLPSDPEKLENLLAQVRNEGRVEFSSFFFDADNGTLLKRYGESR RLHPLSRNKLSLDEAIREETHLLAPISSTADLRIDTTTLSIHDLSELIKTRVLGKKEN ELVLVFESFGFKYGIPKDADFVFDARFLPNPHWIPELKPFTGKDEPVANYLSAQADVM LFTQQIENMLATWLPHLERNNRSYLTVGIGCTGGQHRSVFIAERLASAFRLLGKNVQI RHRTLDKSAPQS" misc_feature 334966..335820 /locus_tag="B565_0308" /note="P-loop ATPase protein family; Region: ATP_bind_2; cl10035" /db_xref="CDD:186894" gene 335853..336125 /locus_tag="B565_0309" /db_xref="GeneID:10486226" CDS 335853..336125 /locus_tag="B565_0309" /codon_start=1 /transl_table=11 /product="phosphotransferase system, phosphocarrier protein HPr" /protein_id="YP_004390961.1" /db_xref="GI:330828009" /db_xref="GeneID:10486226" /translation="MTVSASVEVKNKLGIHARPAMMLFELVQGFDAHVLLRNEDGVEA DADSIIGLLMLDSAQGRQVEVQVEGPEEVEALAAVVELFTSGFNEE" misc_feature 335871..>336032 /locus_tag="B565_0309" /note="Histidine-containing phosphocarrier protein (HPr)-like proteins. HPr is a central component of the bacterial phosphoenolpyruvate sugar phosphotransferase system (PTS). The PTS catalyses the phosphorylation of sugar substrates during their translocation...; Region: PTS-HPr_like; cd00367" /db_xref="CDD:29444" misc_feature 335871..335879 /locus_tag="B565_0309" /note="dimerization domain swap beta strand [polypeptide binding]; other site" /db_xref="CDD:29444" misc_feature order(335895..335897,335901..335906,335910..335915, 335925..335927,335934..335936,335991..336002, 336009..336014) /locus_tag="B565_0309" /note="regulatory protein interface [polypeptide binding]; other site" /db_xref="CDD:29444" misc_feature 335898..335900 /locus_tag="B565_0309" /note="active site" /db_xref="CDD:29444" misc_feature 335994..335996 /locus_tag="B565_0309" /note="regulatory phosphorylation site [posttranslational modification]; other site" /db_xref="CDD:29444" gene complement(336143..338047) /locus_tag="B565_0310" /db_xref="GeneID:10486227" CDS complement(336143..338047) /locus_tag="B565_0310" /codon_start=1 /transl_table=11 /product="transcription antiterminator, BglG family" /protein_id="YP_004390962.1" /db_xref="GI:330828010" /db_xref="GeneID:10486227" /translation="MIKLPHPRLHQLLIQLHAEPLPQEELARRLNVSTRTVRTDVATL NELIATHGAHLIHQRGSGYQLKIYNQGLFEALLAAQGQDSGLPRTSRERVLHLQILLL TAEQGIKLDELADTWYLSRAALQGDMAEVREQLSHFRLSVESKPRLGMRIQGEETAIR ACLTQLLYQELLHNNQLQTLLPNLCPSKTMEVVGNHIHAQLARHQLRLADESLQQLTI YCAVALLRQASGHELRHFASEDLTLPLLAVSRDIYAVLPTLTPPVEDEIAGLAIQIQA RLIADTPQLSPAMAAESEQLVEHLLTYIHQHYPYDLRGDQQLRADLQTHISAMLLRVK YQIGNHNPLADHIKQYYPLAYDITLAAISEWIKQTPYRLTHHEIGYLVIHIGVGLERH YDIGYTRRPQALLLCDAGNATFRVLEARIKREYPQLQLTMLESVRDYEGLAQIAQDFV ISTVKVNEKNAPVVLVAPFPTQYQLEQLGKLVLIDRTRPYMLDKYFDADHFMVVKEPL TQAELFARICDQLEAEDLVESGFRASLQERERIVSTMLGEGIALPHSLDLLARRTLVY TVLAPQGIDWGNGEIATLIFVLAISKADYEEAMGLYDLFLALMNEKASRNLLACRDFA SFKALARTGS" misc_feature complement(336584..338026) /locus_tag="B565_0310" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:33506" misc_feature complement(337856..338026) /locus_tag="B565_0310" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(337547..337765) /locus_tag="B565_0310" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(336893..337156) /locus_tag="B565_0310" /note="PRD domain; Region: PRD; pfam00874" /db_xref="CDD:189750" misc_feature complement(336599..336847) /locus_tag="B565_0310" /note="PTS_IIB_bgl_like: the PTS (phosphotransferase system) IIB domain of a family of sensory systems composed of a membrane-bound sugar-sensor (similar to BglF) and a transcription antiterminator (similar to BglG) which regulate expression of genes involved...; Region: PTS_IIB_bgl_like; cd05568" /db_xref="CDD:99910" misc_feature complement(order(336806..336814,336818..336829)) /locus_tag="B565_0310" /note="P-loop; other site" /db_xref="CDD:99910" misc_feature complement(order(336806..336811,336818..336823, 336827..336829)) /locus_tag="B565_0310" /note="active site" /db_xref="CDD:99910" misc_feature complement(336827..336829) /locus_tag="B565_0310" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99910" misc_feature complement(336161..336562) /locus_tag="B565_0310" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cd00211" /db_xref="CDD:29266" misc_feature complement(order(336386..336388,336434..336436)) /locus_tag="B565_0310" /note="active site" /db_xref="CDD:29266" misc_feature complement(336386..336388) /locus_tag="B565_0310" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29266" gene complement(338155..338895) /locus_tag="B565_0311" /db_xref="GeneID:10486228" CDS complement(338155..338895) /locus_tag="B565_0311" /codon_start=1 /transl_table=11 /product="4-hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase" /protein_id="YP_004390963.1" /db_xref="GI:330828011" /db_xref="GeneID:10486228" /translation="MSLTPNYYRDRVCLNVLAGSKENAGEVYDAAEGHVLVGVLSKNY PDIPSAVADMKEYAKLIDNALSIGLGAGDPRQSAMVAELACQLQPQHVNQVFTGVGAS RALLGQSQTLVNGLISPTGMPGMVRISTGPLSAGQPDGIVPIDTAIALLKDMGGSSVK FFPMGGLACRDEYQAVAEACARHDFWLEPTGGIDLENFEEIVRIALDAGVEKVIPHVY SSIIDNTNGHTRPEDVRTLLAIVKRLLA" misc_feature complement(338227..338874) /locus_tag="B565_0311" /note="Protein of unknown function (DUF1341); Region: DUF1341; cl06211" /db_xref="CDD:195273" gene complement(338895..340010) /locus_tag="B565_0312" /db_xref="GeneID:10486229" CDS complement(338895..340010) /locus_tag="B565_0312" /codon_start=1 /transl_table=11 /product="L-seryl-tRNA selenium transferase family" /protein_id="YP_004390964.1" /db_xref="GI:330828012" /db_xref="GeneID:10486229" /translation="MPSVYEKYQLKPVINASGRMTILGVSTPEQEVVDAVNFGLGHYF EIKDLVNKTGAYLAGLLDVEDAVVVSCASAGIAQSVAAMIVRGDPYRLEHLHAHHHEV PSEIVLPKGHNVNFGAPVGTMVNLGGGKVVEAGYANECSPSQLAAAINANTAAILYIK SHHCVQKSILSVAEAAEVAKTHGLPLIVDAAAEEDLRLYYNQGADLVIYSGAKAIEGP TSGLVLGKRQYVEWVKQQANGIGRAMKVGKEGILGLTHAIERYLAKEKESGAAMVAKM SPFIERLNQLPGVTAKVVWDSAGRDIARTDIAFDHQQIGMTTVQVVTRLQQGTPAIYC RGYKANEGHIEIDVRSVTVPQLDQIHSAIANLVQENR" misc_feature complement(338910..340001) /locus_tag="B565_0312" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl00321" /db_xref="CDD:193768" gene complement(339994..341133) /locus_tag="B565_0313" /db_xref="GeneID:10486230" CDS complement(339994..341133) /locus_tag="B565_0313" /codon_start=1 /transl_table=11 /product="adenine deaminase dihydroorotase" /protein_id="YP_004390965.1" /db_xref="GI:330828013" /db_xref="GeneID:10486230" /translation="MYDMIIRAGRQGDGQLVDIAIREGKIAAIGSLLETATARQILDL AGRIHVSAGWIDGHTHCYPASPIYHDEPDKVGVESGVTTVIDAGSTGADDVDDFQRLT AGCKTRVHALLNISRIGLLRQNELADNRDLDMDLTSAAIRRHPDFIVGIKARMSGSVV GENGLQPLRMAKALQQAHGQLPLMVHVGNTPPDLDEIVALLGDGDLLTHCFNGKPNRI LTPAGELRVAVREAMKRGLLLDIGHGGASFSFEVAELAIAQGILPHTISSDIYCKNRI KGPVYSLAHVMSKFLAIGMTLEQVLACVTHQAADALRLSGKGRLEVGADADLTLFEVA SGPTLFMDTEAQSRSGDQQLQPLAALVGGELVLTHYGKSHHAFCL" misc_feature complement(340033..341130) /locus_tag="B565_0313" /note="probable amidohydrolase EF_0837/AHA_3915; Region: EF_0837; TIGR03583" /db_xref="CDD:132622" misc_feature complement(340066..341082) /locus_tag="B565_0313" /note="Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the...; Region: Met_dep_hydrolase_B; cd01307" /db_xref="CDD:30050" misc_feature complement(order(340327..340329,340507..340509, 340576..340578,340954..340956,340960..340962)) /locus_tag="B565_0313" /note="active site" /db_xref="CDD:30050" gene complement(341176..341826) /locus_tag="B565_0314" /db_xref="GeneID:10486231" CDS complement(341176..341826) /locus_tag="B565_0314" /codon_start=1 /transl_table=11 /product="phosphotransferase system" /protein_id="YP_004390966.1" /db_xref="GI:330828014" /db_xref="GeneID:10486231" /translation="MDEKLKNNFWYADWSFPIFVGLLSAGVFAGTHMFYLYGVGAFNE VAFVAMLKAGMDTGAYGAVAAFGASFLFARIIEGSLVGILDIGGAIQTGVGLGVPALL LGAGIVYPVENFGASLATGMGIGLAIGYVIILARKFTINQSNSTYGADVMMGAGNSSG RFLGPLIILSAMGASIPIGIGSLLGALLFYVWGKPITGGAILGAMLLGTFFPVALV" misc_feature complement(341182..341808) /locus_tag="B565_0314" /note="conserved hypothetical protein EF_0833/AHA_3914; Region: EF_0833; TIGR03579" /db_xref="CDD:132618" gene complement(341838..342614) /locus_tag="B565_0315" /db_xref="GeneID:10486232" CDS complement(341838..342614) /locus_tag="B565_0315" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="YP_004390967.1" /db_xref="GI:330828015" /db_xref="GeneID:10486232" /translation="MFLIIFIKSLIIGGLVGVGVGAGAARMFHAPTVQGMGAFRTLGE LNSCEGDPASHFSFGLGFFFNAWASTVAAGAFTQDVDHRIIPHWATAALLFKNRDLAT TLHDPKKMAIAGGIIGAIVVAFLNSTAAAVPAALQVTAVKVLVPAANLLVNTVMPVIF WLAAIEAGKKSGFWATIFGGLAQLIMGNAVPGLVLGILIGKGVEESGWNHVTKVMMAA IVLLFVLSGFFRGFDMKLIESFHMGVPLWLESVHNLLSGK" misc_feature complement(341841..342539) /locus_tag="B565_0315" /note="conserved hypothetical protein EF_0832/AHA_3913; Region: EF_0832; TIGR03580" /db_xref="CDD:188341" gene complement(342654..342950) /locus_tag="B565_0316" /db_xref="GeneID:10486233" CDS complement(342654..342950) /locus_tag="B565_0316" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390968.1" /db_xref="GI:330828016" /db_xref="GeneID:10486233" /translation="MKENFITQVIVNGKGTTRQQAFASALSQVQPTLLKDNQQVLLRI EPVDVQVLKAEESVRVEKFLFFFLPRQRREYRVQLEIKVQVTSLDVAKVTFTQV" misc_feature complement(342660..342947) /locus_tag="B565_0316" /note="conserved hypothetical protein EF_0831/AHA_3912; Region: EF_0831; TIGR03578" /db_xref="CDD:132617" gene complement(342950..343315) /locus_tag="B565_0317" /db_xref="GeneID:10486234" CDS complement(342950..343315) /locus_tag="B565_0317" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="YP_004390969.1" /db_xref="GI:330828017" /db_xref="GeneID:10486234" /translation="MTAIKLVIGDRLGKGQKVGAGAEAAGANVTIIPGMAADMKLGDV MNKEQADLGISFCGSGGAGAITAQTKYGYKCRYGMRSVEEGVTAINEGCVVLGFGFMD KEELGQKLVEAFAKKHGRA" misc_feature complement(342962..343306) /locus_tag="B565_0317" /note="conserved hypothetical protein EF_0830/AHA_3911; Region: EF_0830; TIGR03577" /db_xref="CDD:132616" gene complement(343333..343692) /locus_tag="B565_0318" /db_xref="GeneID:10486235" CDS complement(343333..343692) /locus_tag="B565_0318" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="YP_004390970.1" /db_xref="GI:330828018" /db_xref="GeneID:10486235" /translation="MQTETHDQTLTPNSPELLRQTDHILARIYPLLAEQGIIPNEVQR QMLASHVKAMVWRSHSGEPLPEVDLSLFEEISPLSLRLAEQVVSWLDQLAYEEAHLLS VHFEVAKENELSSVQNP" misc_feature complement(343360..343686) /locus_tag="B565_0318" /note="PRD domain protein EF_0829/AHA_3910; Region: EF_0829; TIGR03582" /db_xref="CDD:132621" gene complement(344016..345131) /locus_tag="B565_0319" /db_xref="GeneID:10486236" CDS complement(344016..345131) /locus_tag="B565_0319" /codon_start=1 /transl_table=11 /product="periplasmic serine peptidase DegS" /protein_id="YP_004390971.1" /db_xref="GI:330828019" /db_xref="GeneID:10486236" /translation="MKIPPLVSYLGKSVGFGLTVAALLLLLFPHFRGGAQLPGIITNA RELSFSYAAHRAGPAVVNIYTRSFAPNQGNQGELRPQGLGSGVIMNQRGYVLTNYHVI ADADQIIVALQDGRVFSAELVGTDQLTDLAVLYIESDNLPVIPQDPERLPEVGDVVLA IGNPYNVGQTITQGIISATGRTGLSSMGPDSNGRQDLLQTDAAINEGNSGGALVNGRG DLVGINTATYHLNGNQESYGISFAIPYRLAKRIMDELIANGRVIRGYLGISSVEINPI VARMMNLGDLRGLVVESLDPNGPAAKGGLQRGDVLLKINGEAISGVRGAMDKIVESRP GTKLTISVFRSGKPLEVVVTIEEDLRYQQRTASSSAA" misc_feature complement(344055..345005) /locus_tag="B565_0319" /note="Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]; Region: DegQ; COG0265" /db_xref="CDD:30614" misc_feature complement(344454..344978) /locus_tag="B565_0319" /note="Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic...; Region: Tryp_SPc; cl00149" /db_xref="CDD:193682" misc_feature complement(344073..344342) /locus_tag="B565_0319" /note="PDZ domain of tryspin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-...; Region: PDZ_serine_protease; cd00987" /db_xref="CDD:29044" misc_feature complement(order(344154..344159,344166..344171, 344322..344324,344328..344339)) /locus_tag="B565_0319" /note="protein binding site [polypeptide binding]; other site" /db_xref="CDD:29044" gene complement(345241..346632) /locus_tag="B565_0320" /db_xref="GeneID:10486237" CDS complement(345241..346632) /locus_tag="B565_0320" /codon_start=1 /transl_table=11 /product="serine peptidase DegQ" /protein_id="YP_004390972.1" /db_xref="GI:330828020" /db_xref="GeneID:10486237" /translation="MQLFLGAVFHMRKPLSMLSVLALSVGIAMSAAPAQAALPSLLGS NQEMPSLAPVLEQVTPAVVNISVSGKKITRQRLPEQFKFFFGPNMPDEQVSEQPFQAL GSGVIVDAKKGYVITNAHVVHEADEIKVNLKDGREYAAKKIGEDKQSDIALLQIKAED LVQIKFADSDELRVGDYALAIGNPFGLGQTVTSGIVSALGRSGLNIENLENFIQTDAA INSGNSGGALLNLRGELIGINTAILGPNGGNIGIGFAIPSNMVRDLTEQIVKYGEVRR GQLGITGTELTSDIAKTFGYNKKDGAFVNQVMPDSAADKAGIKAGDIIVSIDGKPVRS FGELRAKIATMGAGKQVELGLIRDGKSQTAKVTLKQADDSEVRASALHPALEGAKLST TTDPVSGVAVADIDPRSPAAASGLQKGDIIIGVNRLRINTLGELTKALKNKPDVLALN IQRGDSSLYLVIR" misc_feature complement(345244..346584) /locus_tag="B565_0320" /note="serine endoprotease; Provisional; Region: PRK10942" /db_xref="CDD:182855" misc_feature complement(345913..346347) /locus_tag="B565_0320" /note="Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic...; Region: Tryp_SPc; cl00149" /db_xref="CDD:193682" misc_feature complement(345535..345804) /locus_tag="B565_0320" /note="PDZ domain of tryspin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-...; Region: PDZ_serine_protease; cd00987" /db_xref="CDD:29044" misc_feature complement(order(345616..345621,345628..345633, 345784..345786,345790..345801)) /locus_tag="B565_0320" /note="protein binding site [polypeptide binding]; other site" /db_xref="CDD:29044" misc_feature complement(345247..>345444) /locus_tag="B565_0320" /note="PDZ domain of tryspin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-...; Region: PDZ_serine_protease; cd00987" /db_xref="CDD:29044" gene complement(346684..347064) /locus_tag="B565_0321" /db_xref="GeneID:10486238" CDS complement(346684..347064) /locus_tag="B565_0321" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="YP_004390973.1" /db_xref="GI:330828021" /db_xref="GeneID:10486238" /translation="MSLLTGILLAVAALIIGVVLGRFSVRSRDAGRLEQELKKAHKEL ESYQGQINTHFADSAALMEQLAEQYQTLYRHMAEQSKFLAKAQEPLFRESLVEEAPAN VAEEPGVPPRDYAGASSGLLKQPN" misc_feature complement(346696..347034) /locus_tag="B565_0321" /note="Protein of unknown function (DUF1043); Region: DUF1043; cl11473" /db_xref="CDD:187059" gene 347205..348299 /locus_tag="B565_0322" /db_xref="GeneID:10486239" CDS 347205..348299 /locus_tag="B565_0322" /codon_start=1 /transl_table=11 /product="ATPase" /protein_id="YP_004390974.1" /db_xref="GI:330828022" /db_xref="GeneID:10486239" /translation="MTPQQKYQQDLLRPGFVADPAQGMAISRLERLYQDLLRRPTPTR SRGLLGWLQKPKPPEPVLGIYMWGGVGRGKTWLMDTFFDSLPGTRKMRSHFHRFMHRI HDELQGLSGQSDPLKLVASKLASETDIICFDEFFVSDITDAMLLGTLFQELFGHGVVL VATSNIPPQDLYRNGLQRARFLPAIELIERHCEVLNVDGGIDYRLRTLEQAEIYHCPL DLQAKANLDHYFQQLSGGHTACEGAFEVNHRQLASLGVGEGVLYMEFEQLCCTPRSQN DYIELARLFHTVLLANVQPMGTGTDDAARRFIAMVDEFYERHVKLIMSAAVPMTELYG EGLLNFEFKRCLSRLQEMQSHEYLARVHLP" misc_feature 347205..348287 /locus_tag="B565_0322" /note="AFG1-like ATPase; Region: AFG1_ATPase; pfam03969" /db_xref="CDD:112768" gene 348566..348994 /locus_tag="B565_0323" /db_xref="GeneID:10486240" CDS 348566..348994 /locus_tag="B565_0323" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L13" /protein_id="YP_004390975.1" /db_xref="GI:330828023" /db_xref="GeneID:10486240" /translation="MKTFVAKPETVKRDWYIVDAEGKTLGRIATEIAARLRGKHKAEY TPHVDTGDYIIVVNAEKVHVTGKKFTDKMYHAHSGFPGGIKSISFDKLIQRKPEMVIE AAVKGMLPKGPLGRAMFRKLKVYAGAEHAHAAQQPQVLDI" misc_feature 348608..348949 /locus_tag="B565_0323" /note="Ribosomal protein L13. Protein L13, a large ribosomal subunit protein, is one of five proteins required for an early folding intermediate of 23S rRNA in the assembly of the large subunit. L13 is situated on the bottom of the large subunit, near the...; Region: Ribosomal_L13; cd00392" /db_xref="CDD:88313" misc_feature order(348635..348637,348641..348646,348653..348655, 348662..348664,348674..348676,348758..348760, 348764..348766,348848..348853,348869..348877, 348881..348889,348893..348901,348905..348907, 348911..348913,348923..348925,348932..348937) /locus_tag="B565_0323" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88313" misc_feature 348851..348853 /locus_tag="B565_0323" /note="L3 interface [polypeptide binding]; other site" /db_xref="CDD:88313" gene 349010..349402 /locus_tag="B565_0324" /db_xref="GeneID:10486241" CDS 349010..349402 /locus_tag="B565_0324" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S9" /protein_id="YP_004390976.1" /db_xref="GI:330828024" /db_xref="GeneID:10486241" /translation="MAENQYYGTGRRKSSTARVFIKAGSGKIVINQRSLEQYFGRPTA RMVVRQPLELVEMTEKLDLYITVNGGGISGQAGAIRHGITRALMQYDETLRSELRKAG FVTRDARKVERKKVGLHKARKRPQYSKR" misc_feature 349010..349399 /locus_tag="B565_0324" /note="Ribosomal protein S9/S16; Region: Ribosomal_S9; cl00334" /db_xref="CDD:193774" gene 349698..350288 /locus_tag="B565_0325" /db_xref="GeneID:10486242" CDS 349698..350288 /locus_tag="B565_0325" /codon_start=1 /transl_table=11 /product="Ubiquinol-cytochrome c reductase iron-sulfur subunit" /protein_id="YP_004390977.1" /db_xref="GI:330828025" /db_xref="GeneID:10486242" /translation="MSNAPVDTGRRRFLTWSTVAVGGVGAAFTAVPFIKSWNPSAKAK AAGAPVEVDISKLEPGQLIRVEWRGKPVWVVKRTKQTLDALAAHDDKLRDPSSEEPQQ PDYAHNGYRSIKPEIFVAVGICTHLGCSPSYLPDSFGEQVQGVTSGFFCPCHGSKFDM AGRVFQGVPAPLNLVIPPYQFINDTTIQVGADGKEA" misc_feature 349698..349817 /locus_tag="B565_0325" /note="Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; Region: UCR_Fe-S_N; pfam10399" /db_xref="CDD:150981" misc_feature 349722..350267 /locus_tag="B565_0325" /note="ubiquinol-cytochrome c reductase, iron-sulfur subunit; Region: Rieske_proteo; TIGR01416" /db_xref="CDD:188138" misc_feature 349842..350267 /locus_tag="B565_0325" /note="Iron-sulfur protein (ISP) component of the bc(1) complex family, Rieske domain; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. The bc(1) complex is a multisubunit enzyme found in many different organisms including...; Region: Rieske_cytochrome_bc1; cd03470" /db_xref="CDD:58540" misc_feature order(350067..350069,350073..350078,350148..350150, 350157..350159,350163..350165) /locus_tag="B565_0325" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:58540" gene 350291..351508 /locus_tag="B565_0326" /db_xref="GeneID:10486243" CDS 350291..351508 /locus_tag="B565_0326" /codon_start=1 /transl_table=11 /product="cytochrome b" /protein_id="YP_004390978.1" /db_xref="GI:330828026" /db_xref="GeneID:10486243" /translation="MLSKLMGWIDYRFPLTAMYNDHMAKYPAPKNLNFWYFFGSLAML VLVNQIITGIWLTMNYNPSAEGAFASVEYIMRDVEYGWLLRYMHSTGASAFFIVVYMH MFRGMIYGSYQKPRELLWIFGMLIFLVLMAEAFMGYLLPWGQMSFWGAQVIISLFGAI PVIGDDLTLWIRGDYVISGATLNRFFALHVIALPLVLVMLVAMHILALHEVGSNNPDG IDIKKHKDENGWPLDAVAFHPYFTVKDMIGVAGFLFFFCAIIFFKPDMWGYFLEKPNF EVANGLKTPEHIAPVWYFTPFYAILRAVPDKLLGVIMMGLSIVVLFLLPWLDRCKVRS VRYRSMLHKLNIAQFVVCFIILGVLGVLPSTPTLTLVAQICSLGYFGFFVLLFFYSKN ESTKPLPERVTFK" misc_feature 350330..351418 /locus_tag="B565_0326" /note="cytochrome b; Provisional; Region: CYTB; MTH00145" /db_xref="CDD:177203" misc_feature 350330..350932 /locus_tag="B565_0326" /note="Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria...; Region: Cytochrome_b_N; cd00284" /db_xref="CDD:29347" misc_feature order(350354..350359,350408..350410,350417..350419, 350903..350905,350927..350929) /locus_tag="B565_0326" /note="Qi binding site; other site" /db_xref="CDD:29347" misc_feature order(350357..350362,350372..350380,350396..350401, 350408..350413,350420..350422,350492..350494, 350537..350539,350546..350551,350558..350563, 350567..350572,350576..350581,350588..350590, 350609..350626,350636..350641,350648..350653, 350660..350662,350669..350674,350702..350704, 350714..350734,350744..350749,350771..350773, 350930..350932) /locus_tag="B565_0326" /note="intrachain domain interface; other site" /db_xref="CDD:29347" misc_feature order(350360..350365,350369..350371,350378..350380, 350441..350443,350453..350455,350462..350467, 350492..350497,350504..350509,350516..350530, 350534..350542,350549..350551,350633..350635, 350915..350920) /locus_tag="B565_0326" /note="interchain domain interface [polypeptide binding]; other site" /db_xref="CDD:29347" misc_feature order(350396..350398,350405..350410,350414..350419, 350573..350575,350585..350587,350594..350599, 350603..350605,350645..350650,350657..350662, 350666..350671,350891..350893,350900..350905, 350912..350914,350927..350932) /locus_tag="B565_0326" /note="heme bH binding site [chemical binding]; other site" /db_xref="CDD:29347" misc_feature order(350426..350428,350435..350440,350447..350452, 350456..350461,350468..350470,350501..350503, 350543..350545,350552..350557,350564..350566, 350687..350692,350699..350704,350708..350713, 350855..350857,350861..350863,350870..350872) /locus_tag="B565_0326" /note="heme bL binding site [chemical binding]; other site" /db_xref="CDD:29347" misc_feature order(350672..350674,350681..350686,350693..350698, 350735..350737,350744..350749,350759..350761, 350843..350845,350852..350854) /locus_tag="B565_0326" /note="Qo binding site; other site" /db_xref="CDD:29347" misc_feature 350984..351415 /locus_tag="B565_0326" /note="Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria...; Region: cytochrome_b_C; cl00193" /db_xref="CDD:185816" misc_feature order(350984..350998,351005..351013,351017..351022, 351029..351031,351038..351043,351050..351052, 351059..351064,351071..351076,351080..351082, 351110..351112,351116..351121,351281..351286, 351302..351307) /locus_tag="B565_0326" /note="interchain domain interface [polypeptide binding]; other site" /db_xref="CDD:29371" misc_feature order(350987..350995,350999..351001,351011..351013, 351020..351025,351032..351037,351044..351046, 351056..351061,351065..351073,351080..351082, 351107..351109,351113..351115,351119..351133, 351137..351145,351152..351154,351158..351169, 351212..351214,351242..351244,351251..351256, 351260..351268,351272..351274) /locus_tag="B565_0326" /note="intrachain domain interface; other site" /db_xref="CDD:29371" misc_feature order(350999..351001,351023..351025) /locus_tag="B565_0326" /note="Qi binding site; other site" /db_xref="CDD:29371" misc_feature order(351152..351154,351158..351163,351170..351172, 351179..351184,351230..351232) /locus_tag="B565_0326" /note="Qo binding site; other site" /db_xref="CDD:29371" gene 351505..352239 /locus_tag="B565_0327" /db_xref="GeneID:10486244" CDS 351505..352239 /locus_tag="B565_0327" /codon_start=1 /transl_table=11 /product="Ubiquinol--cytochrome c reductase, cytochrome c1" /protein_id="YP_004390979.1" /db_xref="GI:330828027" /db_xref="GeneID:10486244" /translation="MKRIIFAVLTLLPSLVFASGGAVHLDKANYDLSDKASLQRGAAT FMNYCAGCHSTQYQRYNRVAEDLGIPEDLMKENLIFTGAKVGDLMKSAMSEKDAAKWF GAPPPDLTLVARVRGADWIYTYLRSFYVDETRPFGVNNAVFPSVGMPHVLEPLQGTPR AEFATHTVDGVETQQVVSIKSDGNGEMDDEEYDQTVLDLVNFLVYSAEPVQQERERMG FWVLGFIVIFFIFTVLLKKEFWRDVH" misc_feature 351577..352233 /locus_tag="B565_0327" /note="Cytochrome C1 family; Region: Cytochrom_C1; pfam02167" /db_xref="CDD:190231" gene 352327..352956 /locus_tag="B565_0328" /db_xref="GeneID:10486245" CDS 352327..352956 /locus_tag="B565_0328" /codon_start=1 /transl_table=11 /product="glutathione S-transferase, N-terminal domain-containing protein" /protein_id="YP_004390980.1" /db_xref="GI:330828028" /db_xref="GeneID:10486245" /translation="MAVAANKRSVMTLFSGANDMFSHQVRIVLAEKGVSVDICQVDPA NLPDELAELNPYNSVPTLVDRELALYTSRIIMEYLDERFPHPPLMPVYPVARGNSRLM MHRIELDWYSLADKIMAGTDAEAARNELRDNLLAIAPIFGEMPYFMSEEFGLVDCYMA PLLWRLPSLGIDLTGRGAKELKAYMVRLFERESFQASLTEAEREIRAGV" misc_feature 352327..352950 /locus_tag="B565_0328" /note="stringent starvation protein A; Provisional; Region: sspA; PRK09481" /db_xref="CDD:181895" misc_feature 352357..352575 /locus_tag="B565_0328" /note="GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival...; Region: GST_N_SspA; cd03059" /db_xref="CDD:48608" misc_feature order(352375..352380,352387..352389,352393..352398, 352402..352407,352414..352419,352543..352545, 352552..352557) /locus_tag="B565_0328" /note="C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48608" misc_feature order(352387..352389,352498..352506,352537..352542) /locus_tag="B565_0328" /note="putative GSH binding site (G-site) [chemical binding]; other site" /db_xref="CDD:48608" misc_feature order(352492..352494,352525..352530,352543..352545, 352555..352557,352567..352569) /locus_tag="B565_0328" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48608" misc_feature 352603..352920 /locus_tag="B565_0328" /note="GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival...; Region: GST_C_SspA; cd03186" /db_xref="CDD:48113" misc_feature order(352612..352614,352618..352620,352624..352629, 352639..352641,352651..352653) /locus_tag="B565_0328" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48113" misc_feature order(352624..352626,352657..352659,352795..352800, 352807..352809,352819..352821,352897..352899, 352903..352905,352915..352917) /locus_tag="B565_0328" /note="N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48113" gene 352971..353378 /locus_tag="B565_0329" /db_xref="GeneID:10486246" CDS 352971..353378 /locus_tag="B565_0329" /codon_start=1 /transl_table=11 /product="ClpXP protease specificity-enhancing factor" /protein_id="YP_004390981.1" /db_xref="GI:330828029" /db_xref="GeneID:10486246" /translation="MTPSRPYLLRAFFDWLLDNDLTPHLVVNVNIPHVMVPMQFAQDG QIVLNIAPRAVMQFHMDNEAISFSARFGGVSQQVYIPMAAVLAIHARENGVGTMFPPE PGYDIWLEQAEAPVEPEPEPPRPSGRPTLKVIK" misc_feature 352971..353375 /locus_tag="B565_0329" /note="Stringent starvation protein B; Region: SspB; cl01120" /db_xref="CDD:194042" gene complement(353423..354001) /locus_tag="B565_0330" /db_xref="GeneID:10486247" CDS complement(353423..354001) /locus_tag="B565_0330" /codon_start=1 /transl_table=11 /product="secreted protein" /protein_id="YP_004390982.1" /db_xref="GI:330828030" /db_xref="GeneID:10486247" /translation="MKKHTILLGLLVSTLLLQGCAALVVGGAAGTAKASGDRRTLGAQ WDDQTIELKAANLLADNKPLSAASKISVYSNNGRVLLVGQTPSDVYKIEAGKIVSRIE GVRHVYNELRIGQPASFTTRSNDSWITSKVKADMFGTKNFDSTKVKVVTENGEVFLIG LVTRQEGEQAVNIARHVTGVKRVIKAFEFAQN" misc_feature complement(353657..353842) /locus_tag="B565_0330" /note="BON domain; Region: BON; cl02771" /db_xref="CDD:155094" misc_feature complement(353450..353617) /locus_tag="B565_0330" /note="BON domain; Region: BON; cl02771" /db_xref="CDD:155094" gene complement(354006..354596) /locus_tag="B565_0331" /db_xref="GeneID:10486248" CDS complement(354006..354596) /locus_tag="B565_0331" /codon_start=1 /transl_table=11 /product="phosphoheptose isomerase" /protein_id="YP_004390983.1" /db_xref="GI:330828031" /db_xref="GeneID:10486248" /translation="MTDRIKENYTESIQTKIAAAEALPDAIHTAAQMITICLLNGHKV LACGNGPSAALAQLFISELVNCYETQRPSLPGMALTPDMATISAIATDHGFEEVYAKQ IRALGQPGDILVVITTSGHSRSLIKAAEAALSRDMTIVVLSGGDGGEMAGLLGPNDVE IRVPSARRPRILEVNLLTLHCLCDLIDQTLFPQQED" misc_feature complement(354033..354572) /locus_tag="B565_0331" /note="Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of...; Region: SIS_GmhA; cd05006" /db_xref="CDD:88403" misc_feature complement(order(354033..354035,354045..354047, 354057..354059,354066..354068,354078..354083, 354423..354428,354444..354446,354504..354506, 354513..354515,354549..354551,354561..354563)) /locus_tag="B565_0331" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:88403" misc_feature complement(order(354081..354083,354093..354095, 354231..354233,354240..354248,354444..354452)) /locus_tag="B565_0331" /note="active site" /db_xref="CDD:88403" gene complement(354606..354830) /locus_tag="B565_0332" /db_xref="GeneID:10486249" CDS complement(354606..354830) /locus_tag="B565_0332" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390984.1" /db_xref="GI:330828032" /db_xref="GeneID:10486249" /translation="MHQGQTLVFVEVRYRATGSHGGAASSVTRSKQHKIMLAARHYLK QHAINEANQACRFDVIAFEGDQPAWIQNAF" misc_feature complement(354609..>354830) /locus_tag="B565_0332" /note="Uncharacterised protein family UPF0102; Region: UPF0102; cl00516" /db_xref="CDD:186051" gene complement(354919..356706) /locus_tag="B565_0333" /db_xref="GeneID:10486250" CDS complement(354919..356706) /locus_tag="B565_0333" /codon_start=1 /transl_table=11 /product="LppC superfamily" /protein_id="YP_004390985.1" /db_xref="GI:330828033" /db_xref="GeneID:10486250" /translation="MPSAFSNLTKNAQWYLEQVDPAKPAEAFTWQMLAARSYLALGQA KPASALFQQLQKQAKDPVQKAQLQLLQAHLLLAQGHANQALILLEGKPEVVLDADTQK DWYRQRVVLQLDINNKFGAAKSLIALEPYLNQSEQATNHQQIWSLLKSMTPSTLQALE EAPAPDVTTGWLRLAALVNEFGAQPNLLARQLAGWKRDFPNHPAQKDMPAGLGDLAAT ASTSVQQIAVLLPLSGNLEPQGAAIRNGMLMSYKENQGQFTLNFYDTQSKSTGDLYKQ AIQEGADMIIGPLLKDRVEELLKANPTVPVLALNELDKPVVNDTTYYFSLSAAADAAQ AAQYLYTQGYRKPLLIAAQGRIGYSSIKAFEQSWATLSQDKPVVATFGARNEVQGMVK NALSGRSTARAGEVVQLSDAAPRSIDAVYVVANSLETRMIKPYVDVSVNPMGSLPIYT SSRGYDSAATEVASELNGMHIADMPLLLGGYEKQREQIALLWPQTQGDLLRLFAMGYD AVSLAENLQQMRKVGGMQQAGMSGQLSVDAQGNIVRMLSWGTYQNGKLVDENAVQQLE EPSNEGTMETDAPAVAEPVPLTNEQGTAL" misc_feature complement(355045..356676) /locus_tag="B565_0333" /note="LppC putative lipoprotein; Region: LppC; pfam04348" /db_xref="CDD:113131" misc_feature complement(355063..356034) /locus_tag="B565_0333" /note="Periplasmic binding component of lipoprotein LppC, an immunodominant antigen; Region: PBP1_YraM_LppC_lipoprotein_like; cd06339" /db_xref="CDD:107334" misc_feature complement(order(355351..355353,355432..355434, 355639..355641,355774..355779,355834..355842)) /locus_tag="B565_0333" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:107334" gene 356978..357739 /locus_tag="B565_0334" /db_xref="GeneID:10486251" CDS 356978..357739 /locus_tag="B565_0334" /codon_start=1 /transl_table=11 /product="tetrapyrrole methylase family protein" /protein_id="YP_004390986.1" /db_xref="GI:330828034" /db_xref="GeneID:10486251" /translation="MDILRSVDLVAAEDTRHTGILLSHYQISVPTFALHDHNEQQKAD VLIGRIKEGKSVALVSDAGTPLISDPGYHLVTRCREAGVKVVPLPGPCAAITALSAAG LPTDRFAFEGFLPAKSKGRDDRLQAVIEDTRSLVFYESPRRVQDTVEAIARILGERQV VVCRELTKTFESIHGLPASEMLTWLGEDDNRCRGEIVLVVAGAAKEEEDLPAEAIRTL GLLVAELPLKKAAALTAEIHGVKKNALYKYGLEHY" misc_feature 356978..357733 /locus_tag="B565_0334" /note="Predicted methyltransferases [General function prediction only]; Region: COG0313" /db_xref="CDD:30661" misc_feature 356978..357730 /locus_tag="B565_0334" /note="Tetrapyrrole (Corrin/Porphyrin) Methylases; Region: TP_methylase; cl00304" /db_xref="CDD:197405" gene 358227..358412 /locus_tag="B565_0335" /db_xref="GeneID:10486252" CDS 358227..358412 /locus_tag="B565_0335" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004390987.1" /db_xref="GI:330828035" /db_xref="GeneID:10486252" /translation="MIATRGNPVQNPAYRPTPTSFRRAPRFIAGLFFMHEKIWLRWQD ILGLVILNEIICFKSIE" gene 358726..359184 /locus_tag="B565_0336" /db_xref="GeneID:10486253" CDS 358726..359184 /locus_tag="B565_0336" /codon_start=1 /transl_table=11 /product="MraZ protein" /protein_id="YP_004390988.1" /db_xref="GI:330828036" /db_xref="GeneID:10486253" /translation="MLRGAHAISLDSKGRLAIPTKFRDWLRDESDGQLVCTIDIAHPC LLLYPLNEWEEVERKLKTLSSMNPQERRLQRLLLGHATECELDGNGRLLLSQPLRNHA GLDKKIMLVGQLNKFELWDEARWQQQVNDDILGLPGDDWASSPRLQDFSL" misc_feature 358726..359142 /locus_tag="B565_0336" /note="cell division protein MraZ; Reviewed; Region: PRK00326" /db_xref="CDD:178978" misc_feature 358726..358953 /locus_tag="B565_0336" /note="MraZ protein; Region: MraZ; pfam02381" /db_xref="CDD:111290" misc_feature 358954..>359109 /locus_tag="B565_0336" /note="MraZ protein; Region: MraZ; pfam02381" /db_xref="CDD:111290" gene 359185..360123 /locus_tag="B565_0337" /db_xref="GeneID:10486254" CDS 359185..360123 /locus_tag="B565_0337" /codon_start=1 /transl_table=11 /product="ribosomal RNA small subunit methyltransferase H" /protein_id="YP_004390989.1" /db_xref="GI:330828037" /db_xref="GeneID:10486254" /translation="MTQAAEHITVLLHEAVEGLAIKPDGVYVDGTFGRGGHSRLILQH LGPNGRLIAIDRDPQAIAEAAKIQDPRFEIVHGPFSGIASYLDERGLLGKVDGFLLDL GVSSPQLDDAERGFSFMKDGPLDMRMDPTSGQSAAEWLAKADVDDIAWVLKTFGEERF AKKIARAIVHDRVTEPYVRTRQLAEMIARVNPSKEKGKHAATRSFQAIRIYINSELDE IETALNGALEVLAPHGRLSVISFHSLEDRLVKHFIRKHEKGPEVPYGIPLTEAQLAGG RKLKSVGKALKPSDHEVSENSRSRSSVLRVAERLAE" misc_feature 359185..360054 /locus_tag="B565_0337" /note="Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane]; Region: COG0275" /db_xref="CDD:30623" misc_feature 359203..360054 /locus_tag="B565_0337" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene 360127..360441 /locus_tag="B565_0338" /db_xref="GeneID:10486255" CDS 360127..360441 /locus_tag="B565_0338" /codon_start=1 /transl_table=11 /product="cell division protein FtsL" /protein_id="YP_004390990.1" /db_xref="GI:330828038" /db_xref="GeneID:10486255" /translation="MSEVRVHLAKEIVADLWRHKLQIFLSVAVLVTAFAVILVTNMTR GLTAKQNDLMAEEDRLNIEWRHLLLEQGTLAEHSRVASLAMDKLQMGRPLVTTEKVIT QP" misc_feature 360148..360435 /locus_tag="B565_0338" /note="Septum formation initiator; Region: DivIC; cl11433" /db_xref="CDD:187037" gene 360438..362192 /locus_tag="B565_0339" /db_xref="GeneID:10486256" CDS 360438..362192 /locus_tag="B565_0339" /codon_start=1 /transl_table=11 /product="peptidoglycan synthetase FtsI" /protein_id="YP_004390991.1" /db_xref="GI:330828039" /db_xref="GeneID:10486256" /translation="MKRKATAKAAKANVKAPSIYPWRFRTLAVFIGIAFVGLILRLAW IQVINPDRLRQEGDMRSLRTTSTQAVRGMITDRNGEQLAVSVPVEAVWADPKTVHESG AINNERAWLALSAVLKLDINTLKHRIANPSKRFVYLQRQVTPAVAEYIKGLKLGGVYL RPEARRFYPTGEISAHLVGVTNIDGSGIEGIERSYNEWLTATPGEMRVRKDRQGRVIE RLGIVKEGKNANDLQLSIDQRVQALAYRALKRATDENKATSGSMVMLDIKTGEVLAMV NTPSYNPNNRGQYQSFRVRNRVVTDTYEPGSTVKPLILLSALQAGVTSWKDFIPGGPL FIGAKQIKDVSIHKATNLYDILRYSSNIGMSRIALRMPAQEMINTLSMFGFGMDTGSG LMGESSGMLPQRRRWSDIERATLSFGYGLRVTPLQLASAYATLANKGKRVPLSIVKVT TPPKGEQVIDHNNAAAMLQALEYVVDNAIPKAKIPGYRVGGKSGTAKVAVAGGYGKDY MAWFAGFAPASDPRFVMVVVINEPKGSAYYGGAVATPPFAEAMGGVLQLFNIRPDAVP PAVPTKLARTEASLVPRT" misc_feature 360489..362138 /locus_tag="B565_0339" /note="peptidoglycan synthase FtsI; Provisional; Region: PRK15105" /db_xref="CDD:185060" misc_feature 360636..361100 /locus_tag="B565_0339" /note="Penicillin-binding Protein dimerisation domain; Region: PBP_dimer; pfam03717" /db_xref="CDD:190723" misc_feature 361215..362090 /locus_tag="B565_0339" /note="Penicillin binding protein transpeptidase domain; Region: Transpeptidase; cl01039" /db_xref="CDD:154162" gene 362176..363657 /locus_tag="B565_0340" /db_xref="GeneID:10486257" CDS 362176..363657 /locus_tag="B565_0340" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelateligase" /protein_id="YP_004390992.1" /db_xref="GI:330828040" /db_xref="GeneID:10486257" /translation="MSRALDALLRPFGIQAPALTLTDIQLDSRRVGPGSLFVAIRGHQ VDGRRFIEQAVAQGATAVVFEEDGEFIPPSTPVPCIGMRDLPAHLSALAGYFYDQPAQ KLDLVGITGTNGKSTTALLVANWRTLLGGKAGVMGTIGNGLFGNLIEAENTTGSAVQV QANLAALQAQGADLVAMEVSSHGLVQHRVAALPFAAAVFTNLSRDHLDYHGTMEAYGA AKEQLLQLVDESNAVINRDDELGAKWLEKYPAAVAFSVNGPIEHHSGRQLTAQQLDFH QQGFRAQINSSWGNGVLSAPLLGRFNVSNVLAAMGVMLVLGYDFNELLATAPKLQPVT GRMECFGGGDTPLAVVDYAHTPDALEKALQALRVHCTGQLWCLIGCGGDRDRGKRPMM AAMAEQYADRVILTDDNPRTEEPARIMADMVAGLRDPAAVQVEHDRVKAIALAIGQAS KQDIILVAGKGHEDYQIIGTDKRHYSDRETVAAALHTLLESFK" misc_feature 362176..363630 /locus_tag="B565_0340" /note="UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Provisional; Region: murE; PRK00139" /db_xref="CDD:178894" misc_feature 362233..362466 /locus_tag="B565_0340" /note="Mur ligase family, catalytic domain; Region: Mur_ligase; pfam01225" /db_xref="CDD:144716" misc_feature 362500..363111 /locus_tag="B565_0340" /note="Mur ligase middle domain; Region: Mur_ligase_M; pfam08245" /db_xref="CDD:191979" misc_feature 363172..363432 /locus_tag="B565_0340" /note="Mur ligase family, glutamate ligase domain; Region: Mur_ligase_C; pfam02875" /db_xref="CDD:190458" gene 363654..365009 /locus_tag="B565_0341" /db_xref="GeneID:10486258" CDS 363654..365009 /locus_tag="B565_0341" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase" /protein_id="YP_004390993.1" /db_xref="GI:330828041" /db_xref="GeneID:10486258" /translation="MMTLRLAELAQVLDARLIGDDGEITVVSTDTRTLGAGALFVALR GERFDAHDFCEQAVQAGASALLVERELPLAIPQLVVTDSLKGLGRLGKLVRERINPKV LAITGSCGKTTVKEMATAILRNEGEVLATAGNFNNEVGVPLTLLRLEPQHKFAVMELG ANHPGEIAWTTSLAKPDAAIINNVAAAHLEGFGSLEGVFHAKSEIFEGLSEGGTAIVN ADNEFWPKWRERGIQCAFSIEGQSQPFHARNLVLNERGCAEFVMVTPQGELSLTLAIP GRHNVANALAAAAGCLALGASLGSVKAGLEQMAPVKGRFCVQRWGGLTLVDDTYNASV ESVLAGIDALTAMGGFKVLVFGDMRELGEESAEQHARVGRHARERGLDAVLTVGEESR HTADAAAGRHFDNKASLFEVLAQMINTHQEISILVKGARGSRMEDIVEMVKGHQESAT C" misc_feature 363654..365006 /locus_tag="B565_0341" /note="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed; Region: murF; PRK10773" /db_xref="CDD:182718" misc_feature 363720..363899 /locus_tag="B565_0341" /note="Mur ligase family, catalytic domain; Region: Mur_ligase; pfam01225" /db_xref="CDD:144716" misc_feature 363966..364496 /locus_tag="B565_0341" /note="Mur ligase middle domain; Region: Mur_ligase_M; pfam08245" /db_xref="CDD:191979" misc_feature 364584..364850 /locus_tag="B565_0341" /note="Mur ligase family, glutamate ligase domain; Region: Mur_ligase_C; pfam02875" /db_xref="CDD:190458" gene 365003..366085 /locus_tag="B565_0342" /db_xref="GeneID:10486259" CDS 365003..366085 /locus_tag="B565_0342" /codon_start=1 /transl_table=11 /product="phospho-N-acetylmuramoyl-pentapeptide- transferase" /protein_id="YP_004390994.1" /db_xref="GI:330828042" /db_xref="GeneID:10486259" /translation="MLVWLAELLTPHFTFFNVFSYLTFRAILSIITGLGVALWMGPRL IRRLQILKFGQVIRNDGPESHLSKRGTPTMGGLMIIAAIFTSVLLWCRLDNPYVWLVL FVLGAYGAIGFADDYLKVVRKNTDGLIARWKYFWQSAVALAVAVFLYATATHEGQTQL VVPFLKDVMPQLGLMFIVLTYFVIVGTSNAVNLTDGLDGLAIMPTVMVAGGFALIAWA TGNVNFASYLHIPYVPYTSELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA LGTIAVLVRQEFLLVIMGGVFVMETVSVILQVGSYKLRGVRIFRMAPIHHHYEKKGWP EPRVIVRFWIITLVLVLLGLATLKVR" misc_feature 365048..366037 /locus_tag="B565_0342" /note="phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional; Region: mraY; PRK00108" /db_xref="CDD:178869" misc_feature 365183..366037 /locus_tag="B565_0342" /note="Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the formation of the first lipid intermediate in the synthesis of bacterial cell wall peptidoglycan. It catalyzes the formation of undecaprenyl-pyrophosphoryl-N-...; Region: GT_MraY; cd06852" /db_xref="CDD:133462" misc_feature 365345..365350 /locus_tag="B565_0342" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:133462" misc_feature 365792..365803 /locus_tag="B565_0342" /note="putative catalytic motif [active]" /db_xref="CDD:133462" misc_feature order(365951..365953,365969..365983) /locus_tag="B565_0342" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:133462" gene 366090..367373 /locus_tag="B565_0343" /db_xref="GeneID:10486260" CDS 366090..367373 /locus_tag="B565_0343" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanine--D-glutamate ligase" /protein_id="YP_004390995.1" /db_xref="GI:330828043" /db_xref="GeneID:10486260" /translation="MVIIIGLGKTGLSCVDYFLGRGVTPLVMDTRANPPGKDQLPPEV ELIHGLDEALLKQAHMIVASPGIALATPELKAAAECGVQIVGDIELFVRETQTPVIAI TGSNGKSTVTTLVGEMIAEAGLNVGVGGNIGTPALELLKQPMDLCVLELSSFQLETTH SLRAAASVVLNLSEDHMDRYQGMADYRAAKMEIHQHSKHILVNRDDAQTLPDVGQVWQ SFGLDCNGYGRCLLDGRHWLTLHGEPLLAVDEMKIVGAHNQANALAAMALCDAVGIPR AAQLTVLRRFEGLPHRARFVREVNGVRWINDSKATNVGATLAAVAGVRESVKGRLLLL AGGQGKGQDFGPIQALLGNQIDHMYCFGQDAEVLLALGEQTERVADLAAAVANAAVDA KPGDWVLLAPACASLDQFKSFEVRGDRFTEMVLAL" misc_feature 366093..367352 /locus_tag="B565_0343" /note="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional; Region: murD; PRK03806" /db_xref="CDD:179651" misc_feature 366393..>366707 /locus_tag="B565_0343" /note="Mur ligase middle domain; Region: Mur_ligase_M; pfam08245" /db_xref="CDD:191979" misc_feature 366957..>367064 /locus_tag="B565_0343" /note="Mur ligase family, glutamate ligase domain; Region: Mur_ligase_C; pfam02875" /db_xref="CDD:190458" gene 367370..368551 /locus_tag="B565_0344" /db_xref="GeneID:10486261" CDS 367370..368551 /locus_tag="B565_0344" /codon_start=1 /transl_table=11 /product="cell division protein FtsW" /protein_id="YP_004390996.1" /db_xref="GI:330828044" /db_xref="GeneID:10486261" /translation="MNALRAAAGLFQRWLLPARPAGLYDRQLVLLALSLMAVGVVIVA SASIPEGIALGDDPFMFVKRHALFLVMALGISWFVLQVPMARWQQHNGPMLLLAILML VLVLLVGRNVNGAVRWLPLGPFNLQPAEFGKLALFVYLAGYLVRRQSEVREAWIGFLK PLAVFGVLAVLLLLQPDLGSTVVMFVTSFGMLFLAGARLGQFLTLIGAGLGSVVMLII VEPYRMRRVTSFMDPWADPFGSGYQLTQSLMAFGRGSWFGEGLGNSIQKMEYLPEAHT DFVFAILGEELGYVGVLGALFLIFALAVKALKLGHRALVAERLYDGYLAIGIGIWFSF QTFVNVGAASGMMPTKGLTLPLVSYGGSSLIIMSVAVSMLIRIDFELRQATAQARVRE V" misc_feature 367370..368542 /locus_tag="B565_0344" /note="Cell cycle protein; Region: FTSW_RODA_SPOVE; cl00511" /db_xref="CDD:189110" gene 368551..369633 /locus_tag="B565_0345" /db_xref="GeneID:10486262" CDS 368551..369633 /locus_tag="B565_0345" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase" /protein_id="YP_004390997.1" /db_xref="GI:330828045" /db_xref="GeneID:10486262" /translation="MSKTLLVMAGGTGGHVFPGLAVADRLKAQGWTVHWLGTADRMEA ELVPAHGYPISFIDIQGVRGNGIKRLLVAPYRIVKSILQARQVLKTVRPDVVLGMGGF ASGPGGVAAWFSGIPLLLHEQNAAAGMTNKLLARIARRVLMAFPGAFAPSRRTAVVGN PVRPEVVALPDPQLRSGAEPLHLLIVGGSLGARVLNEQVPAAVAASGVPIEVRHQCGK GNAETVSAAYAQHGITAEVSEFIKDMASAYAWADLVVCRAGALTVSEVAAAGVAAIFV PLPHAVDDHQTRNALTLVDGGAAEFLPQSELNTASLAARLTWLAGRRETLFNMAKAAR RVAITDAAERVADECKQLATGQRGKD" misc_feature 368554..369609 /locus_tag="B565_0345" /note="undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional; Region: murG; PRK00726" /db_xref="CDD:179100" misc_feature 368560..369594 /locus_tag="B565_0345" /note="MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl...; Region: GT1_MurG; cd03785" /db_xref="CDD:99961" misc_feature order(368590..368592,368920..368922,369115..369117, 369193..369195,369268..369270,369280..369282, 369325..369336,369343..369345,369382..369384, 369403..369408,369415..369417) /locus_tag="B565_0345" /note="active site" /db_xref="CDD:99961" misc_feature order(368761..368763,368770..368772,368803..368805, 368887..368889,368962..368964) /locus_tag="B565_0345" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99961" gene 369745..371199 /locus_tag="B565_0346" /db_xref="GeneID:10486263" CDS 369745..371199 /locus_tag="B565_0346" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramate--L-alanine ligase" /protein_id="YP_004390998.1" /db_xref="GI:330828046" /db_xref="GeneID:10486263" /translation="MTKVELAKLRTVIPEMRRVRRIHFIGIGGAGMGGIAEVLANEGY QVTGSDLTRNAVTERLAGLGAHIFVGHSAEHVEGASVVVVSTAIKQDNPELLAARELR IPVVRRAEMLAELMRFRHGIAIAGTHGKTTTTSLVASIYAEADRDPTFVIGGLLNSAG TNARLGSSRYLIAEADESDASFLHLQPMVSIVTNIEADHMDTYGGDFSKLKATFIEFL HNLPFYGLAVVCIDDPVIRGMLPEIARPTLTYGLSDDADVQVLDFVQTTNHSCFRVRR KEAGELLVTLNLPGIHNALNAAAAIAVATEDGVSDEAIISALAKFEGVGRRFQQYGEF ETGRGKAMLVDDYGHHPSEVKVTINAARAGWPEKRLVMVFQPHRYTRTRDLYEDFADV LSKVDVLVMLEVYAAGEEPIPGADGRALCRSIRSRGNLEPIFVATPDDVPAVLADLIG EGDLVLTQGAGNVGALARRLGEMKLSIDSMKSGA" misc_feature 369781..371169 /locus_tag="B565_0346" /note="UDP-N-acetylmuramate--L-alanine ligase; Provisional; Region: murC; PRK00421" /db_xref="CDD:179018" misc_feature 369805..370104 /locus_tag="B565_0346" /note="Mur ligase family, catalytic domain; Region: Mur_ligase; pfam01225" /db_xref="CDD:144716" misc_feature 370114..370623 /locus_tag="B565_0346" /note="Mur ligase middle domain; Region: Mur_ligase_M; pfam08245" /db_xref="CDD:191979" misc_feature 370714..370989 /locus_tag="B565_0346" /note="Mur ligase family, glutamate ligase domain; Region: Mur_ligase_C; pfam02875" /db_xref="CDD:190458" gene 371297..372049 /locus_tag="B565_0347" /db_xref="GeneID:10486264" CDS 371297..372049 /locus_tag="B565_0347" /codon_start=1 /transl_table=11 /product="cell division protein FtsQ" /protein_id="YP_004390999.1" /db_xref="GI:330828047" /db_xref="GeneID:10486264" /translation="MEARAQGRTKGGFIAGVAFFLLVIWGCYRTALDVKGWLTDANRL PMSELLLQGQHQYLQTEELRMAVLDGAELRNFFELDVNELQARLNALPWVASVSVRKK WPNKIKIYLTEQDVAARWNGNRFVNTKGKVFSAPDRVKTPLLQLSGPDDQAARVLKES RQYESQLAAKGYKLLGVNLTPRHAWELTLDGNIKLFLGRNDIALRLQRFIDAFPVIEP RAQVAYVDLRYDTGMAVGWKKSEEKVHDQHRR" misc_feature 371462..371638 /locus_tag="B565_0347" /note="POTRA domain, FtsQ-type; Region: POTRA_1; pfam08478" /db_xref="CDD:149506" misc_feature 371645..371980 /locus_tag="B565_0347" /note="Cell division protein FtsQ; Region: FtsQ; pfam03799" /db_xref="CDD:190754" gene 372030..373289 /locus_tag="B565_0348" /db_xref="GeneID:10486265" CDS 372030..373289 /locus_tag="B565_0348" /note="involved in recruitment of FtsK to Z ring" /codon_start=1 /transl_table=11 /product="cell division protein with ATPase domain" /protein_id="YP_004391000.1" /db_xref="GI:330828048" /db_xref="GeneID:10486265" /translation="MTNTADRNLIVGLDIGTTKVAVLVGEVLPDGELNVIGMGSHASR GMEKGGVNDLDSVVKSLRRAVEEAEMMADCQISSVYLGLSGKHIDCRNETGMVPISDE EVTQEDVDNVIHTAKSVRLSDELRVLHVLPQEFAIDYQEGIKNPVGLSGVRMAAKVHL ITCHNDMARNIEKCVEKVGLRVDQLIFSALASSYAVLTEDEKELGVCVVDIGGGTMDM SLFTGGALRHTKVIPYAGSTVTSDIAYAFGTPPLDAEAIKVRYGCALGRLVSKEDNIE VPSVGGRPARSLQRQTLAEVIEPRYTELLSMVNDELVRVQSELKAQGVKHQLAAGVVL TGGAAQIEGIVECAEQIFQSQVRVGEPMNIRGLSDYVQAPVYSTAVGLLQYGRTHQAT GSNKEYAAKASVGGLVKRVSNWLRGEF" misc_feature 372030..373286 /locus_tag="B565_0348" /note="cell division protein FtsA; Reviewed; Region: ftsA; PRK09472" /db_xref="CDD:181887" misc_feature 372057..372617 /locus_tag="B565_0348" /note="Cell division protein FtsA; Region: FtsA; cl11496" /db_xref="CDD:196250" misc_feature 372645..373109 /locus_tag="B565_0348" /note="Cell division protein FtsA; Region: FtsA; cl11496" /db_xref="CDD:196250" gene 373329..374480 /locus_tag="B565_0349" /db_xref="GeneID:10486266" CDS 373329..374480 /locus_tag="B565_0349" /codon_start=1 /transl_table=11 /product="cell division protein ftsZ" /protein_id="YP_004391001.1" /db_xref="GI:330828049" /db_xref="GeneID:10486266" /translation="MFEFMDSHTDEAVIKVIGVGGGGGNAVEHMVRQNIEGVEFITVN TDAQALRNSSANTTLQIGGGITKGLGAGANPEVGRDAAMEDREALRELLTGSDMVFIA AGMGGGTGTGAAPIVAEVAREMGILTVAVVTKPFSFEGKKRMGFAAHGIEELSKNVDS LITIPNDKLLKVLGRGISLLDAFKAANDVLLGAVQGIAELITRPGLINVDFADVRTVM REMGTAMMGTGSASGDDRAEEAAEKAISSPLLEDVDLAGARGILVNITAGMDMTIEEF ETVGNAVKAFASENATVVVGTVIDPEMHDELRVTVVATGIGAERKPDITLVKSSQVQE RPVRQPLVSDMMQGRVMDEAPAKVVNAEPQARREPDYLDIPAFLRKQAD" misc_feature 373329..374477 /locus_tag="B565_0349" /note="cell division protein FtsZ; Validated; Region: PRK09330" /db_xref="CDD:181781" misc_feature 373401..374273 /locus_tag="B565_0349" /note="FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum...; Region: FtsZ_type1; cd02201" /db_xref="CDD:100021" misc_feature order(373401..373403,373473..373475,373638..373658, 373731..373736,373755..373757,373824..373826, 373875..373877,373884..373889,373896..373898) /locus_tag="B565_0349" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:100021" misc_feature order(373947..373952,373956..373958,374136..374147, 374154..374156) /locus_tag="B565_0349" /note="SulA interaction site; other site" /db_xref="CDD:100021" gene 374697..375503 /locus_tag="B565_0350" /db_xref="GeneID:10486267" CDS 374697..375503 /locus_tag="B565_0350" /codon_start=1 /transl_table=11 /product="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase" /protein_id="YP_004391002.1" /db_xref="GI:330828050" /db_xref="GeneID:10486267" /translation="MRTDLNPVVELPANADQVRDTVLCTALVNEAGVRVSTIEHLSAA LAGMGIDNLYVEVDAPEIPVMDGSAHPFIYLLQEVGIREQNAAKQFVRIKKSIRVEDG DKWAEFHPYRNGFKMDLEIDFQHPVFEGRNQRCVLDFSGASFVKEISRARTFGFMRDI EYLRSQNLALGGSLENAVVLDDYRVLNEDGLRYEDEFVKHKMLDAIGDLYMCNRSIIG EFRAYKTGHALNNKLLRALLAEQEAWELVTFEGEGDKAPIAYYDNGLVLA" misc_feature 374700..375476 /locus_tag="B565_0350" /note="UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane]; Region: LpxC; cl00512" /db_xref="CDD:189111" gene 375644..376549 /locus_tag="B565_0351" /db_xref="GeneID:10486268" CDS 375644..376549 /locus_tag="B565_0351" /codon_start=1 /transl_table=11 /product="membrane peptidase, M23/M37 family" /protein_id="YP_004391003.1" /db_xref="GI:330828051" /db_xref="GeneID:10486268" /translation="MSITLILHGKQRRKLHLPKQRLAWVGGILFSLLALGGGWLWQSW HQKMEALEVALAVAEQQSVDQSGDEAREQLAMLAAQVGTMQGQLGRLNALGERLTEQA DLDPDEFNFKELPPMGGPSYDEELEVSLNELQASMKHLSQQLSSREEQLSVLESFIMN HHITDAGFISGTPVKQERVWVSSGFGGRVDPFNGRAKMHKGVDFRGKPGTPILATGPG IVSWAGRHPEFGNMVEINHGNGLVTRYAHNSKLLVEVGTLVDQGQKIALMGRTGRATG VHLHYEVLKDGRQVNPARFLSARRG" misc_feature 376232..376519 /locus_tag="B565_0351" /note="Peptidase family M23; Region: Peptidase_M23; pfam01551" /db_xref="CDD:190031" gene 376609..379329 /locus_tag="B565_0352" /db_xref="GeneID:10486269" CDS 376609..379329 /locus_tag="B565_0352" /codon_start=1 /transl_table=11 /product="protein translocase subunit secA" /protein_id="YP_004391004.1" /db_xref="GI:330828052" /db_xref="GeneID:10486269" /translation="MISTLLTKIIGSRNDRTLKALRKIVKQINAMEPQFEALSDAELQ AKTAEYRQRIEQGETLEQLLPEAFATVREASKRVFGMRHFDVQLIGGMVLNSNRIAEM KTGEGKTLTATLPAYLNALSGRGVHVVTVNDYLAKRDAEANRPLFAFLGMTVDCNVPG MDASQKRDAYAADITYGTNNEFGFDYLRDNMAFSPEQRVQRPLNYALVDEVDSVLIDE ARTPLIISGPAEDSSELYIRVNKLIPLLVKQDKEDTEEYTGDGHYTVDEKNRQALLTE NGQIFVEELLKKEGLLDENDSLFSASNISLLHHVNAGLRAHTLFERNVDYIVQKDEIV IVDEHTGRTMPGRRWSDGLHQAVEAKEGVKIQNENQTLASITFQNYFRLYNKLAGMTG TADTEAFEFQQIYGLDTVVIPTNKPMVRKDMGDLVYLTANEKYAAIIEDIRQCVAKGQ PVLVGTVSIENSELLSGILTKEKIPHKVLNAKFHAMEAEIVAQAGQTGAVTIATNMAG RGTDIVLGGNWQAEIAKLENPTSEQIAELKAAWQVRHDAVLAAGGLHIIGTERHESRR IDNQLRGRSGRQGDPGSSRFYLSMEDTLMRIFASDRVTGMMKKLGMEEGEAIEHPWVT KAIENAQRKVEGRNFDIRKSLLEFDDVANDQRKVVYEQRNELLDTNDISETIHVIRDD VYGAVIDEYIPPQSLEEMWDVPGLEARLKADFALDLPLQQWLAEDDKLYEEKLRERIL DEATKLYAHKEELVGKEVLRNFEKAVMLQTLDGLWKEHLAAMDHLRQGIHLRGYAQKN PKQEYKRESFDLFTQMLETLKRDVVSILSRVQVQERDVEAMEEQQRQQAEAAPRTYTH AAAESQLADEQAAGEEGHTTFVRDEQKVGRNDPCPCGSGKKYKHCHGQLT" misc_feature 376612..379104 /locus_tag="B565_0352" /note="preprotein translocase subunit SecA; Reviewed; Region: PRK12904" /db_xref="CDD:183826" misc_feature 376891..377349 /locus_tag="B565_0352" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cl14882" /db_xref="CDD:197446" misc_feature 377290..377682 /locus_tag="B565_0352" /note="SecA preprotein cross-linking domain; Region: SecA_PP_bind; pfam01043" /db_xref="CDD:144583" misc_feature <379210..379311 /locus_tag="B565_0352" /note="hypothetical protein; Provisional; Region: PRK00183" /db_xref="CDD:166842" misc_feature 379264..379326 /locus_tag="B565_0352" /note="SEC-C motif; Region: SEC-C; cl12132" /db_xref="CDD:196349" gene 379404..379808 /locus_tag="B565_0353" /db_xref="GeneID:10486270" CDS 379404..379808 /locus_tag="B565_0353" /codon_start=1 /transl_table=11 /product="7,8-dihydro-8-oxoguanine-triphosphatase" /protein_id="YP_004391005.1" /db_xref="GI:330828053" /db_xref="GeneID:10486270" /translation="MEQKKRIWVAVGVIENERGDIFIARRSSDRHQGDRWEFPGGKVE SGEDLLTALDRELWEEIGIRVLDCAPFMELHHDYPEKQVLLDIWKVTRFSGEPFGKEG QECLWVPVAELNNYHFPDANGPIVARLQGLQA" misc_feature 379422..379793 /locus_tag="B565_0353" /note="The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic...; Region: MutT_pyrophosphohydrolase; cd03425" /db_xref="CDD:72883" misc_feature order(379422..379424,379428..379430,379524..379529, 379533..379535,379569..379571,379578..379583, 379650..379652,379704..379706,379767..379769) /locus_tag="B565_0353" /note="active site" /db_xref="CDD:72883" misc_feature order(379422..379424,379428..379430,379524..379529, 379644..379646,379650..379652,379767..379769) /locus_tag="B565_0353" /note="8-oxo-dGMP binding site [chemical binding]; other site" /db_xref="CDD:72883" misc_feature 379524..379592 /locus_tag="B565_0353" /note="nudix motif; other site" /db_xref="CDD:72883" misc_feature order(379569..379571,379578..379583) /locus_tag="B565_0353" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:72883" gene complement(379886..380080) /locus_tag="B565_0354" /db_xref="GeneID:10486271" CDS complement(379886..380080) /locus_tag="B565_0354" /codon_start=1 /transl_table=11 /product="Dephospho-CoA kinase" /protein_id="YP_004391006.1" /db_xref="GI:330828054" /db_xref="GeneID:10486271" /translation="MVTKVKCPTCQSEVEWGPQSPFRPFCSKRCQLIDLGEWADEEKR IPGEINPDLLPEPEEGDQWL" misc_feature complement(379892..380080) /locus_tag="B565_0354" /note="Domain of unknown function (DUF329); Region: DUF329; cl01144" /db_xref="CDD:194050" gene complement(380090..380812) /locus_tag="B565_0355" /db_xref="GeneID:10486272" CDS complement(380090..380812) /locus_tag="B565_0355" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391007.1" /db_xref="GI:330828055" /db_xref="GeneID:10486272" /translation="MIYDFPLNEKSRTYLRLESLFSQIRDNLESEQSWAHIAFFKGLF DLQELLERGDLRADLIKDLERLGQRLSHWASLPDVDLEQIKLMQQESSQLSRNLLNSP RPGARLKEDRLLGSIRQRFSIPGGLCAFDVPQLHHWLGTPAIARHQQMQGWLSDINLL MNAITLLLRLWRESGSFSEQVASNGFFQDTAESAELIRIKLPGNLFCYPTLSGHKNRF ALRFLPTAEQPIGDVPFQLACC" misc_feature complement(380093..380812) /locus_tag="B565_0355" /note="Protein of unknown function (DUF1342); Region: DUF1342; cl01892" /db_xref="CDD:186493" gene complement(380850..381464) /locus_tag="B565_0356" /db_xref="GeneID:10486273" CDS complement(380850..381464) /locus_tag="B565_0356" /codon_start=1 /transl_table=11 /product="Dephospho-CoA kinase" /protein_id="YP_004391008.1" /db_xref="GI:330828056" /db_xref="GeneID:10486273" /translation="MYVVAITGGIGSGKTTIANQFAALGIEVVDADVIAREVVEPGTP ALAAIADHFGPDVIEPSGQLDRRALRERVFSDPQAKGWLNALLHPLIRSEMLRQCAAA SSPYCLLVVPLLVENKLTGLANRVLVIDVDEATQIERTCRRDGVSAEQARAIIAAQAS RVERLAAADDVIENHNGSEMAIKTRILALHETYLAIASQQGRQV" misc_feature complement(380862..381464) /locus_tag="B565_0356" /note="Dephospho-CoA kinase [Coenzyme metabolism]; Region: CoaE; COG0237" /db_xref="CDD:30586" misc_feature complement(380928..381413) /locus_tag="B565_0356" /note="Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis; Region: DPCK; cd02022" /db_xref="CDD:30195" misc_feature complement(order(380991..380993,381126..381131, 381201..381203,381369..381371)) /locus_tag="B565_0356" /note="CoA-binding site [chemical binding]; other site" /db_xref="CDD:30195" gene complement(381478..382350) /locus_tag="B565_0357" /db_xref="GeneID:10486274" CDS complement(381478..382350) /locus_tag="B565_0357" /codon_start=1 /transl_table=11 /product="N-methyltransferase" /protein_id="YP_004391009.1" /db_xref="GI:330828057" /db_xref="GeneID:10486274" /translation="MTLLLELAHSLPWLYFSLVFLFSLMIGSFLNVVIHRLPIMLERE WQAEYRGYFSPDEEATAPERYNLMVPRSACPHCGHAITALENIPLLSWLWLKGRCRDC QAPISARYPLVELLTALLSVAVAMVISPGWGALAALLLTWVLVALTFIDLDKMLLPDQ LTLPLLWGGLLFNLASGFVPLADAVIGAMAGYLVLWSLYWAFKLLTSKEGMGYGDFKL LAALGAWLGWQALPIILLLSSLVGAVIGISLIALQKHHQGKPIPFGPYLAIAGWIALL WGDTITRWYLSTLL" misc_feature complement(381481..382314) /locus_tag="B565_0357" /note="Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]; Region: PulO; COG1989" /db_xref="CDD:32172" misc_feature complement(381961..382290) /locus_tag="B565_0357" /note="Bacterial Peptidase A24 N-terminal domain; Region: DiS_P_DiS; pfam06750" /db_xref="CDD:191601" misc_feature complement(381610..>381828) /locus_tag="B565_0357" /note="Type IV leader peptidase family; Region: Peptidase_A24; cl02077" /db_xref="CDD:154734" gene complement(382412..383653) /locus_tag="B565_0358" /db_xref="GeneID:10486275" CDS complement(382412..383653) /locus_tag="B565_0358" /codon_start=1 /transl_table=11 /product="type IV pilus assembly protein tapC" /protein_id="YP_004391010.1" /db_xref="GI:330828058" /db_xref="GeneID:10486275" /translation="MATLTKKNNAPKKVFAFRWHGVNRKGQKVSGELQADSINTVKTE LRKQGVNVTKVAKKSQGLFSKGGAKIKPMDIAIVSRQITTMLSAGVPLVQSLQIIARS HEKASMRELMGQIAADVETGTPMSEALRRHPLYFDDLYCDLVEAGEQSGALETIYDRI ATYREKSEALKSKIKKAMFYPTMVILVAIVVTSILLLFVIPQFEDIFKSFGAELPVFT QFVIGISRFMQNWWYVFFGGTALGIFLYVRAWRASQKVKDNTDKFVLTIPVVGMILHK AAMARFARTLSTTFSAGIPLVDALISAAGASGNYVYRTAVMAIRNEVVAGMQINVAMR TVDLFPDMVIQMVMIGEESGAIDDMLSKVATIFEQEVDDLVDGLTSLLEPLIMVVLGV LVGGMVIAMYLPIFKLGDVVG" misc_feature complement(382415..383608) /locus_tag="B565_0358" /note="Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]; Region: PulF; COG1459" /db_xref="CDD:31648" misc_feature complement(383051..383419) /locus_tag="B565_0358" /note="Bacterial type II secretion system protein F domain; Region: GSPII_F; cl00906" /db_xref="CDD:154078" misc_feature complement(382442..382810) /locus_tag="B565_0358" /note="Bacterial type II secretion system protein F domain; Region: GSPII_F; cl00906" /db_xref="CDD:154078" gene complement(383894..385600) /locus_tag="B565_0359" /db_xref="GeneID:10486276" CDS complement(383894..385600) /locus_tag="B565_0359" /codon_start=1 /transl_table=11 /product="type IV-A pilus assembly ATPase PilB" /protein_id="YP_004391011.1" /db_xref="GI:330828059" /db_xref="GeneID:10486276" /translation="MTSSPNSGLALSLAASSLISEEDSQRYLSQAKAQRKPFVTFLIE NDILDSKALADFCELEYGVPLLDLAAFDLAEIPQKYLNQKLIEKHHVLPIYTQGHTLY IAMSDPTNVSALEDFGFSFGLHTEALLVEENKLTAAIGKLLESENDALGMEDIDESEI SDLEVSDENSRLDESVNTADDDAPIVKYINKILMDAIKRGASDLHFEPYEFKYRVRFR IDGILHEIATPPVNLSNRFSARLKVMARLDIAERRLPQDGRIKLKLSRNKSMDMRVNT LPTMWGEKIVIRLLDSSAARLNIEQLGFDDRQKAQYLRALSKPQGMILVTGPTGSGKT VSLYTGLNILNTTEVNISTAEDPVEINLPGVNQVQVNPKAGLTFASALRSFLRQDPDV VMVGEIRDLETAEIAIKAAQTGHLVLSTLHTNSAAETLTRMMNMGVPAFNIASSVTLI MAQRLARKLCDHCKAPEVVPEAELLELGFTPQQLAAGLRLFKPVGCKECSGGYKGRVG IYEIMLMSENIAKLIMQGANSLQIAAIAQKEGMRTLRTSGLEKARLGVTSLAEVNRVT TN" misc_feature complement(383897..385540) /locus_tag="B565_0359" /note="type IV-A pilus assembly ATPase PilB; Region: type_IV_pilB; TIGR02538" /db_xref="CDD:162908" misc_feature complement(385163..385477) /locus_tag="B565_0359" /note="GSPII_E N-terminal domain; Region: GSPII_E_N; pfam05157" /db_xref="CDD:191212" misc_feature complement(384083..384883) /locus_tag="B565_0359" /note="PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP). It is responsible for the export the majority of Gram-negative bacterial exoenzymes and toxins. PulE is a cytoplasmic protein of the GSP, which...; Region: PulE-GspE; cd01129" /db_xref="CDD:29995" misc_feature complement(384599..384622) /locus_tag="B565_0359" /note="Walker A motif; other site" /db_xref="CDD:29995" misc_feature complement(order(384410..384415,384533..384538, 384542..384544,384599..384607,384617..384619)) /locus_tag="B565_0359" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29995" misc_feature complement(384410..384427) /locus_tag="B565_0359" /note="Walker B motif; other site" /db_xref="CDD:29995" gene complement(386345..387220) /locus_tag="B565_0360" /db_xref="GeneID:10486277" CDS complement(386345..387220) /locus_tag="B565_0360" /codon_start=1 /transl_table=11 /product="Quinolinate phosphoribosyltransferase" /protein_id="YP_004391012.1" /db_xref="GI:330828060" /db_xref="GeneID:10486277" /translation="MFQQDVSRAVRAALLEDLGDALTTLDQPDASADITAQLIPADRM ASARVITREAGVFCGQPWVDEVFLQLKAQLGGEVKVEWLVQDGEVLSPNQELFRLHGP ARLLLTGERNALNFVQTLSGVATLTARYVAELEGTDCRLLDTRKTIPGLRTAQKYAVT CGGGKNHRIGLYDAYLIKENHILACGGIAEAINEARHLNPGKPVEVEVESLAELEQAL AAKADIVMLDNFDVTMMREAVAINQGRAKLEVSGNVTLDTLAEFAATGVDFISVGALT KHVRALDLSMRFIQQ" misc_feature complement(386357..387214) /locus_tag="B565_0360" /note="quinolinate phosphoribosyltransferase; Validated; Region: PRK09016" /db_xref="CDD:181612" misc_feature complement(386360..387202) /locus_tag="B565_0360" /note="Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-...; Region: QPRTase; cd01572" /db_xref="CDD:29619" misc_feature complement(order(386390..386392,386636..386638, 386669..386671,386678..386683,386687..386689, 386693..386695,386705..386710,386765..386770, 386780..386782,386786..386788,386876..386878, 386888..386893,387113..387118)) /locus_tag="B565_0360" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29619" misc_feature complement(order(386390..386392,386399..386404, 386408..386410,386465..386470,386537..386539, 386717..386722,386783..386791)) /locus_tag="B565_0360" /note="active site" /db_xref="CDD:29619" gene complement(387224..387694) /locus_tag="B565_0361" /db_xref="GeneID:10486278" CDS complement(387224..387694) /locus_tag="B565_0361" /codon_start=1 /transl_table=11 /product="putative aspartyl protease" /protein_id="YP_004391013.1" /db_xref="GI:330828061" /db_xref="GeneID:10486278" /translation="MQHTARWMWLLTWLSLMGLLTLYFHSRNQPSVTASGELLLRADQ SGHYRLEGAINGQPVQLLLDTGATRITIPQQVAERLGLTAYGSSQVNTAAGQIRVGNG TIETLAMGPLTLYDLAIFINPAADGDEVLVGMNALGRLELVQKERQLLLRPLQE" misc_feature complement(387281..387559) /locus_tag="B565_0361" /note="Bacterial aspartate proteases, retropepsin-like protease family; Region: retropepsin_like_bacteria; cd05483" /db_xref="CDD:133150" misc_feature complement(387497..387505) /locus_tag="B565_0361" /note="catalytic motif [active]" /db_xref="CDD:133150" misc_feature complement(387503..387505) /locus_tag="B565_0361" /note="Catalytic residue [active]" /db_xref="CDD:133150" gene 387825..388400 /locus_tag="B565_0362" /db_xref="GeneID:10486279" CDS 387825..388400 /locus_tag="B565_0362" /codon_start=1 /transl_table=11 /product="N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD" /protein_id="YP_004391014.1" /db_xref="GI:330828062" /db_xref="GeneID:10486279" /translation="MIQLASQPCFSIDAAGWCQQARRVPSPHHNERASPDDISLLVVH GISLPPGEFGGPFIDDLFMGRLDPEAHPYFAGIHQLRVSAHCLIRRDGELVQYVPFGA RAWHAGVSSWQGREACNDFSIGIELEGTDETPYTEAQYRALAGLTRAISERYPAITHE KIVGHCDIAPGRKTDPGASFQWDYYRQLLNS" misc_feature <388044..388355 /locus_tag="B565_0362" /note="Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20...; Region: PGRP; cd06583" /db_xref="CDD:133475" misc_feature order(388062..388064,388074..388076,388116..388118, 388137..388142,388179..388181,388317..388319, 388329..388331,388341..388349) /locus_tag="B565_0362" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133475" misc_feature order(388074..388076,388317..388319,388341..388343, 388347..388349) /locus_tag="B565_0362" /note="amidase catalytic site [active]" /db_xref="CDD:133475" misc_feature order(388317..388319,388347..388349) /locus_tag="B565_0362" /note="Zn binding residues [ion binding]; other site" /db_xref="CDD:133475" gene 388679..389443 /locus_tag="B565_0363" /db_xref="GeneID:10486280" CDS 388679..389443 /locus_tag="B565_0363" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase complex repressor" /protein_id="YP_004391015.1" /db_xref="GI:330828063" /db_xref="GeneID:10486280" /translation="MPYRKITQPKLADSIVAELEQMILEGSLQPGQKLPPERELAIQF QVSRPSLREAIQRLEARGLLYRRQGGGTYVQNALSKGIADPLFELLSTHPEAQYDLLE FRHALEGICAYYAALRGTGSDFERIRQVQTTIEEAGQLGSLVAESAAVTQFYLAVAEA SHNVVLLHLLRAMSPMLEQNILQNNEILNRRPGVVAKIRRHRANLIEAILSGAPERAR TACHEHLAFIEDTLLDMQREDSRIQRSMRRIRQQEN" misc_feature 388679..389395 /locus_tag="B565_0363" /note="transcriptional regulator PdhR; Reviewed; Region: pdhR; PRK09464" /db_xref="CDD:181879" misc_feature 388706..388900 /locus_tag="B565_0363" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature order(388706..388708,388712..388714,388781..388783, 388787..388792,388814..388828,388832..388837, 388844..388846,388874..388879,388883..388894) /locus_tag="B565_0363" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature 388973..389356 /locus_tag="B565_0363" /note="FCD domain; Region: FCD; cl11656" /db_xref="CDD:196275" gene 389523..392183 /locus_tag="B565_0364" /db_xref="GeneID:10486281" CDS 389523..392183 /locus_tag="B565_0364" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase E1 component" /protein_id="YP_004391016.1" /db_xref="GI:330828064" /db_xref="GeneID:10486281" /translation="MSDILKNDVDPIETLEWLASLESLLREEGPQRAQFILEQLAEKA RVSGVDVAAKANRDYINTIPSSDEPDYPGDLEMERRIRAIIRWNAMMIVLRASKKDLD LGGHMSSFASSATIYDVCFNHFFRARNEKDGGDLVYFQGHISPGIYARAFAEGRLTEE QLDNFRQEVDGKGIPSYPHPKLMPDFWQFPTVSMGLGPIAAIYQARFLKYLTDRGIKD CSEQTVYAFLGDGEMDEPEAKGALTVAVREKLDNLVFVVNCNLQRLDGPVVGNGKVIN ELEGLFAGAGWDVTKVIWGRKWDELLKKDTSGKLIQLMNETVDGDYQTMKSRDGGYIR EHFFNRYPETAALVKDMTDEEIFALNRGGHDPRKLFAAFNKATQTKGKPTVILAKTIK GYGMGEAAEGKNIAHQVKKMELDSVRHLRDRFNLPVADEQLADLPYLKIEAGSAEHKY LHDRRTALKGYVPTRLRESTTKLEIPALDAFGPLLGEQAREISTTMAFVRSLNVMLKD KSIGKRIVPILADEARTFGMEGLFRQIGIYSPHGQQYTPQDRDIVSYYKEDKQGQVLQ DGINELGAMSSWLAAATSYSTNDCPMIPFYIYYSMFGFQRIGDMAWAAGDQQARGFLL GATSGRTTLNGEGLQHEDGHSHILANTIPNCISYDPSYAYEVAVIVQDGLRRMYGENP ENVFYYITTLNENYAMPAMPEGAEEGIRKGIYKLESVAGAKAKVQLLGCGSILGHVRK AAQILASEYGIGSDVFSVTSFNELARDGQDADRWNMLHPTAEARVPYIAQVLGSEATI AATDYMKSFADQVRAFVPTENYRVLGTDGYGRSDSRANLRRHFEVNEFYVVVAALTEL AKRGEVDKQVVADAIAKYGIDADKVNPLYA" misc_feature 389523..392180 /locus_tag="B565_0364" /note="pyruvate dehydrogenase subunit E1; Reviewed; Region: aceE; PRK09405" /db_xref="CDD:181825" misc_feature 389745..390902 /locus_tag="B565_0364" /note="Thiamine pyrophosphate (TPP) family, E1 of E. coli PDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the Escherichia coli pyruvate dehydrogenase multienzyme complex (PDC). PDC catalyzes the oxidative...; Region: TPP_E1_EcPDC_like; cd02017" /db_xref="CDD:48180" misc_feature order(389823..389831,390018..390029,390048..390053, 390057..390059,390063..390065,390090..390092, 390096..390104,390222..390233,390240..390242, 390249..390251,390261..390263,390309..390317, 390327..390329,390351..390353,390360..390365, 390372..390374) /locus_tag="B565_0364" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48180" misc_feature order(389847..389849,389940..389942,389946..389948, 390096..390098,390102..390104,390210..390218, 390225..390227,390300..390302,390306..390308, 390696..390698) /locus_tag="B565_0364" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:48180" gene 392303..394192 /locus_tag="B565_0365" /db_xref="GeneID:10486282" CDS 392303..394192 /locus_tag="B565_0365" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase" /protein_id="YP_004391017.1" /db_xref="GI:330828065" /db_xref="GeneID:10486282" /translation="MSKQIMVPDIGADEVEVTEIMVAVGDKVELDQSIIAVEGDKASM EVPAPSAGIVKEILIKVGDKVATGSQIMIFEAEGAAAPAEVAAPVAAAPAAAPAAAVR KDVHVPDIGDDEVDVTEIMVAVGDMVEADQSIIAVEGDKASMEVPAPFAGRVVEIKVA AGAKVSTGSLVMVFEVAGAAPAAVAAPAQAAAPVAAAPVAAAAKEVNVPDIGGDEVEV TEIMVAVGDKVEADQSLIAVEGDKASMEVPAPFAGVVKEIKVKAGDKVSTGSLIMVFE VAGAAPAAAPVAQAAAPVAAAPVAAAPAPVAQATAAATDFVANDAYVHASPAVRRLAR EFGVNLAKVKASGRKGRIVKEDVQAYVKDAIKRAESAPASAGVAGGNGLGVLPWPKVD FSKFGDVEEVELTRIQKISGPNLHRNWVMIPHVTQFDEADTTELEAFRKEQNAMLEKQ KADVKITPLVFILKAAAKALEAHPRFCSSLSEDGSKLIMKKYIHIGVAVDTPNGLVVP VVRDVNKKGIMELSRDLAEISKKARAGKLTAADMQGGCFTISSLGGIGGTSFTPIVNA PEVAILGVSKSEMKPKWNGKEFAPRLMLPLALSYDHRVIDGADGARFITTMNGVLSDI RRLVL" misc_feature 392303..394189 /locus_tag="B565_0365" /note="pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated; Region: aceF; PRK11854" /db_xref="CDD:183337" misc_feature 392309..392524 /locus_tag="B565_0365" /note="Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid...; Region: lipoyl_domain; cd06849" /db_xref="CDD:133458" misc_feature order(392393..392395,392414..392431,392441..392443) /locus_tag="B565_0365" /note="E3 interaction surface; other site" /db_xref="CDD:133458" misc_feature 392423..392425 /locus_tag="B565_0365" /note="lipoyl attachment site [posttranslational modification]; other site" /db_xref="CDD:133458" misc_feature 392609..392824 /locus_tag="B565_0365" /note="Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid...; Region: lipoyl_domain; cd06849" /db_xref="CDD:133458" misc_feature order(392693..392695,392714..392731,392741..392743) /locus_tag="B565_0365" /note="E3 interaction surface; other site" /db_xref="CDD:133458" misc_feature 392723..392725 /locus_tag="B565_0365" /note="lipoyl attachment site [posttranslational modification]; other site" /db_xref="CDD:133458" misc_feature 392912..393127 /locus_tag="B565_0365" /note="Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid...; Region: lipoyl_domain; cd06849" /db_xref="CDD:133458" misc_feature order(392996..392998,393017..393034,393044..393046) /locus_tag="B565_0365" /note="E3 interaction surface; other site" /db_xref="CDD:133458" misc_feature 393026..393028 /locus_tag="B565_0365" /note="lipoyl attachment site [posttranslational modification]; other site" /db_xref="CDD:133458" misc_feature 393269..393379 /locus_tag="B565_0365" /note="e3 binding domain; Region: E3_binding; pfam02817" /db_xref="CDD:111687" misc_feature 393491..394189 /locus_tag="B565_0365" /note="2-oxoacid dehydrogenases acyltransferase (catalytic domain); Region: 2-oxoacid_dh; cl02008" /db_xref="CDD:194225" gene 394338..395768 /locus_tag="B565_0366" /db_xref="GeneID:10486283" CDS 394338..395768 /locus_tag="B565_0366" /codon_start=1 /transl_table=11 /product="dihydrolipoyl dehydrogenase" /protein_id="YP_004391018.1" /db_xref="GI:330828066" /db_xref="GeneID:10486283" /translation="MMSKEIKTQVVVLGAGPAGYSAAFRAADLGLDTIIVERYSTLGG VCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGAPQTDIDKIRLWKEKVINQLTGGL AGMAKMRKVQVVNGLGKFTGPNTLEVTGEDGKTTVTFDNAIIAAGSRPVKLPFIPHDD PRVWDSTDALELKTVPGKLLVIGGGIIGLEMGTVYSSLGSEIDVVEFADQLVPAADKD IVKIYTKRVAKKFNVMLETKVTAVEAREDGLYVSYEGKHAPAEPVRYDNVLVAVGRVP NGKMLDAEKAGVAVTERGFIEVDKQLRTNVAHIHAIGDIVGQPMLAHKGVHEGHVAAE VIAGKKHYFDPKVIPSIAYTEPEMAWVGLTEKEAKQQGLNFEVATFPWAASGRAIASD CSDGMTKLIFDKESGRVIGGAIVGTNGGELLGEIGLAIEMGADAEDIALTIHAHPTLH ESVGLAAEVFEGSITDLPNAKAKKKK" misc_feature 394347..395756 /locus_tag="B565_0366" /note="dihydrolipoamide dehydrogenase; Reviewed; Region: PRK06467" /db_xref="CDD:180579" misc_feature 394347..>394469 /locus_tag="B565_0366" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 394905..395105 /locus_tag="B565_0366" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 395379..395708 /locus_tag="B565_0366" /note="Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Region: Pyr_redox_dim; pfam02852" /db_xref="CDD:190451" gene 395932..396855 /locus_tag="B565_0367" /db_xref="GeneID:10486284" CDS 395932..396855 /locus_tag="B565_0367" /codon_start=1 /transl_table=11 /product="GAF sensor-containing diguanylate cyclase" /protein_id="YP_004391019.1" /db_xref="GI:330828067" /db_xref="GeneID:10486284" /translation="METLRRLSLLDSEAEERFDRLTRMARRLFNVPIALVSLVDEDRQ WFKSCIGLEVSETARDISFCGHAIMGNETFIVPDASQDPRFADNPLVVGGPGIRFYAG QPLRIANGCKLGTLCIIDTVPRELSDEDVGLLKDLAAMVVRELEAVQLATIDELTLIS NRRGFVMLAEKSLSLAGRLQMPLALLYLDLNGFKGINDRWGHAEGDRALIAFATLLKQ AFRGADVFARMGGDEFAVLLPNVLEAQAQLAYERFNAMLAEHNQHSGCGYALTCSTGI VCYDGRGCVSLAELLTSADELMYQRKRDGKG" misc_feature 395932..396381 /locus_tag="B565_0367" /note="FOG: GAF domain [Signal transduction mechanisms]; Region: FhlA; COG2203" /db_xref="CDD:32385" misc_feature 395968..396366 /locus_tag="B565_0367" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" misc_feature 396385..396852 /locus_tag="B565_0367" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(396496..396498,396625..396627) /locus_tag="B565_0367" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(396511..396513,396520..396525,396535..396537, 396547..396549,396613..396615,396619..396630) /locus_tag="B565_0367" /note="active site" /db_xref="CDD:143635" misc_feature order(396601..396603,396685..396687) /locus_tag="B565_0367" /note="I-site; other site" /db_xref="CDD:143635" gene complement(396940..398886) /locus_tag="B565_0368" /db_xref="GeneID:10486285" CDS complement(396940..398886) /locus_tag="B565_0368" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004391020.1" /db_xref="GI:330828068" /db_xref="GeneID:10486285" /translation="MSVVNLNLLSTFMLATLTLKQKILATVTLAVVVSCLLVGYFSQR SAQQLIENRMFEQELPNLTQRISKEIEQDLHGIAQAARQLATDRFILDWVDRGMPKEQ EPILINQLKDVANQYGLVTASFADRQTAAYYNQDGFLRNLTPTQDAWFYDYTKSQKEM TLSIFRESNGEVKLFVNFQQLYGRGLAGFAKSLDTMVTMVSNFRLEESGIVFMVDGSG KVKLHPEANRIERDTLGNIASGDTGSLLAKRPFAVINAEVNGEPMVLASSYIPLLDWY LVAQVPEAEIYAELDQTRNEILMISLVIALAMGLMGMLLAGSVSRPLNELARLFKELG SGDGDLTQRLKVEGRDELSQVATGFNNFVAKIHGSIEQVAENSRQLAATANEVANKAQ LTQHNCTAQRDRTVQVATAIHEMGATVSEIAGNASLAAEVARQANDQADAGAVVVAQA RHGIVDLSGEIEQVAGVIESLASQTDSIGSILETIRSISEQTNLLALNAAIEAARAGE QGRGFAVVADEVRNLANRSAASTAEIQGMINRLQEQSARAVSAMAQGRNQSLEVVSQA DEANAALGQITAHITQINDMNIQVATATEEQSSVVGEINRNVEDINQLTMETADIAHQ LTESSRSLQQLSGQLDKLVGNFRL" misc_feature complement(396943..398127) /locus_tag="B565_0368" /note="Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:31182" misc_feature complement(397774..397935) /locus_tag="B565_0368" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(397009..397509) /locus_tag="B565_0368" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 399085..401346 /locus_tag="B565_0369" /db_xref="GeneID:10486286" CDS 399085..401346 /locus_tag="B565_0369" /codon_start=1 /transl_table=11 /product="serine protease" /protein_id="YP_004391021.1" /db_xref="GI:330828069" /db_xref="GeneID:10486286" /translation="MRSLGAGWTRLLLVMLAACPLLAVAAQGDRPKIAVVLSGGGAKG SAHIGILKVLEQKRIPVDIIVGTSMGSYVAGMYAMGLSAEEVERTTLAIDWNKGYQDK VGRDELSLRKKQQNEQYQLRTDIGVNGDTTQLPDGFFQGQSMASLLRGATSNLPVQES FDDLPIPYRAMATDMETVTPFVLDHGSLAKAMQASMSIPGALKPVEWEGHILADGGSV NNMPVDVAKAMGADVVIAVDIGAKLRTRESLKSGLAMIDQLTTYMTQVGTDKQKALMG PKDILIAPEFGDMGIADFARMPEGIKIGETAADKVSLQLDKLSLTKAQYNAYRNQKLS RRAERSGQPAYFIDKVEIINKSRLSDETVRAMLKVRPDKVQTNESLEAGIRRLYALES FDRITYEVEERDGENVLLVDASEKNWGPGYLNFQFGFTDDFENTSNYNVGMSYTLTNV NEWGAEWLTEASLGTAKHIKTDFYTPLEPSQTFYGEASLAYDQTLRRLFFPNPDPEAV SISYLDSEYSFFSGDLAVGWNRQPWSRLSMGLEGQLGTIDVKNFKGLEMDATAWGPYV RFEHDNLDSRYFPYQGMKWDMKLGHSHVSVDGLESADGRSEGWNYQLSMIKPWSWDRH SLNLILEGGGSGSEEVVPLHIQDLGGLFRLSGFQRYQLSGRYSLFGGLRYIYRVADND FGALKMPLYLGGSLEQGGVWNKGEDISLESSFTAGSLYVGVESFLGPVFLGYGMAEGG NDVFYLQLGSTFE" misc_feature 399175..400029 /locus_tag="B565_0369" /note="Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]; Region: RssA; COG1752" /db_xref="CDD:31938" misc_feature 399181..399801 /locus_tag="B565_0369" /note="Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1; Region: Pat_PNPLA6_PNPLA7_NTE1_like; cd07205" /db_xref="CDD:132844" misc_feature order(399202..399207,399211..399213,399286..399288, 399724..399726) /locus_tag="B565_0369" /note="active site" /db_xref="CDD:132844" misc_feature 399280..399294 /locus_tag="B565_0369" /note="nucleophile elbow; other site" /db_xref="CDD:132844" misc_feature <400030..401340 /locus_tag="B565_0369" /note="Outer membrane protein [Cell envelope biogenesis, outer membrane]; Region: COG0729" /db_xref="CDD:31073" misc_feature 400117..400332 /locus_tag="B565_0369" /note="Surface antigen variable number repeat; Region: Surf_Ag_VNR; cl10520" /db_xref="CDD:195983" gene 401576..404173 /locus_tag="B565_0370" /db_xref="GeneID:10486287" CDS 401576..404173 /locus_tag="B565_0370" /codon_start=1 /transl_table=11 /product="bifunctional aconitate hydratase 2/2-methylisocitrate dehydratas e" /protein_id="YP_004391022.1" /db_xref="GI:330828070" /db_xref="GeneID:10486287" /translation="MLETYRKHVAERAAEGVVAKPLDAEQVAALVELLKNPPAGEEDF LKELLSSRIPPGVDEAAYVKAGFLTAVAKGEAHSPILTAAEAVELLGTMQGGYNIQPL IDLLDHATLAPLAAKGLSHTLLMFDSFHDVEEKAKAGNVHAKQVMQSWADAEWFLSRP ELAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNARPGITPDKDGAVG PIKTIDALKEKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPFVPNKRAGGVCLGG KIAPIFFNTMEDAGALPIEVDVSKLEMGDVIDIYPYAGKICKHGTEQVLAQFELKTDV LIDEVRAGGRIPLIIGRGLTDKAREALGLPFSTVFRRPQPVADTGKGFTLAQKMVGKA CGVKGIRPGTYCEPKMTTVGSQDTTGPMTRDELKDLACLGFSADLTMQSFCHTAAYPK PIDVQTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF PAGSGLVAFAAATGVMPLDMPESVLVRFKGELQPGITLRDLVHAIPYAAIQKGLLTVE KAGKKNIFSGRILEIEGLPTLKVEQAFELADASAERSAAGCTIKLDKEPIIEYLKSNI VMLKWMLSEGYGDVRTITRRIKGMEEWLANPTLMEADKDAEYAEIIEIDLATIKEPIL CAPNDPDDARLLSDVAGDKIDEVFIGSCMTNIGHFRAAGKLLEKYQGELPTRMWIAPP TKMDKDQLTEEGYYGIFGRVGARIEIPGCSLCMGNQARVAEGASVVSTSTRNFPNRLG KGANVYLASAELAAVAAILGKIPTVAEYLQYAKALDATAADTYRYLNFNEIASYTKKA DAVILQQAV" misc_feature 401576..404113 /locus_tag="B565_0370" /note="bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated; Region: PRK09238" /db_xref="CDD:181718" misc_feature 402086..402508 /locus_tag="B565_0370" /note="Aconitase B swivel domain. Aconitate hydratase B is involved in energy metabolism as part of the TCA cycle. It catalyses the formation of cis-aconitate from citrate. This is the aconitase swivel domain, which undergoes swivelling conformational change...; Region: AcnB_Swivel; cd01576" /db_xref="CDD:29525" misc_feature 402305..402313 /locus_tag="B565_0370" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:29525" misc_feature 402725..404035 /locus_tag="B565_0370" /note="Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle; Region: AcnB; cd01581" /db_xref="CDD:153131" misc_feature order(402815..402817,402824..402826,403064..403069, 403892..403894,403946..403948,403961..403963) /locus_tag="B565_0370" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:153131" misc_feature order(403070..403072,403703..403705,403880..403882, 403889..403894,403943..403945) /locus_tag="B565_0370" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:153131" gene 404454..406040 /locus_tag="B565_0371" /db_xref="GeneID:10486288" CDS 404454..406040 /locus_tag="B565_0371" /codon_start=1 /transl_table=11 /product="EAL domain-containing protein" /protein_id="YP_004391023.1" /db_xref="GI:330828071" /db_xref="GeneID:10486288" /translation="MFLFRIDLSRTGLRFGGALLVFTLPLLVGAWLIHSNYVQELKAE SSASAHKARTLMESMLDHAEQANRSVLPLVNAPCRDNLLVLRKKVAIEPFLRSVNLVR NGIINCTSLFGEANDADDGSIYTGRKLLLMSGNRVRQNHPLLVVRTEQGKDAALSAID STQLSFMLSMSGKSSALYLQVGSAWLNESGRYLSEAPTLHRGISQALTSSHYPFTIHA GYAMPVYWKSLWAARHVALSWLAVSSLLLAWLVWWVLGRPGSPTDELRRALRAREFVP YLQPLIASHDGKMMGAEVLMRWEHVNEGVIRPDLFIPQAEESGLIVPMTTHIMKQVAT RLNRSQEQLPDGFHISFNISAAHCHDFALLAECRAFLGHFLPGKVVLVLELTERELLM SDPQTLSLFRQLDEMGVKLAIDDFGTGHSSLAYLQQFHVDYLKIDKSFIARIGTESLS EHIVDNVIDLATRLGLALVAEGVESERQADYLRAKGVDYLQGYLFARPMPLRQFCEEL LPEEAQTRQPDGVRGIPNAT" misc_feature 404487..406013 /locus_tag="B565_0371" /note="Predicted signal transduction protein containing sensor and EAL domains [Signal transduction mechanisms]; Region: COG4943" /db_xref="CDD:34551" misc_feature 404568..405146 /locus_tag="B565_0371" /note="CSS motif domain associated with EAL; Region: CSS-motif; pfam12792" /db_xref="CDD:193268" misc_feature 405243..405962 /locus_tag="B565_0371" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:30163" gene 406203..407597 /locus_tag="B565_0372" /db_xref="GeneID:10486289" CDS 406203..407597 /locus_tag="B565_0372" /codon_start=1 /transl_table=11 /product="FAD binding domain-containing protein" /protein_id="YP_004391024.1" /db_xref="GI:330828072" /db_xref="GeneID:10486289" /translation="MTVQFQAFHSIKAIGNREVLFNWSRTNPLGALDQVWRPKSRDEL QALLREHPERKLRLIGSGLSFEPIHSVYAEGSQALLVDLHHLRGQLAKTADTVTYQAG TPLDTVYAELIAMERMLPASPGVIGIQTLGGALSTGTHGQGLHQSALCDAVEAMTVML ANGDIIRVDRTDPRFGAFVMGMGMLGILLDVTLRTVPNRIMRCAKFTTDYPFLLEHNE RLNREHGFVKSWWFAWTGESHIWLVDPASDEEVARYRAGGSEPLLLDGDIDARMNATI DATLQKMAKDTKDETLAGEHFETVRRFKDASDLVGNVYQILCKGIPAPQINCEVAVPL HRMNEALETLQAWQEANPGVLHYPFILRCTGPSEAWLSAAYGQSVCWIGFLVYLAADG TFVNGSMEQMRELQQLLAPLGGIPHFGKHLAMDLYDFPALLPRWNDFVALKAELDPHG RFENRWLSDLFANR" misc_feature 406311..407585 /locus_tag="B565_0372" /note="FAD-linked oxidoreductase; Region: bact_FAD_ox; TIGR01679" /db_xref="CDD:130740" misc_feature 406311..406709 /locus_tag="B565_0372" /note="FAD binding domain; Region: FAD_binding_4; pfam01565" /db_xref="CDD:190040" misc_feature 406773..407573 /locus_tag="B565_0372" /note="D-arabinono-1,4-lactone oxidase; Region: ALO; cl04370" /db_xref="CDD:174818" gene 407607..408734 /locus_tag="B565_0373" /db_xref="GeneID:10486290" CDS 407607..408734 /locus_tag="B565_0373" /codon_start=1 /transl_table=11 /product="Cobalamin synthesis protein/P47K family protein" /protein_id="YP_004391025.1" /db_xref="GI:330828073" /db_xref="GeneID:10486290" /translation="MTDMQDTRIPVTLLTGFLGSGKTTLLNHWVKQPELGECAVLINE FGSVGLDHHLVQQVDEQVMLLDSGCICCSVQGSLVEALQGLFMKAIQRKIKPFKRLII ETTGLADPAPVLFTLREEGFIAQRYRFDGTVTVVDAGHIEQQLAAQYEAVKQVALADL LVVSKGDLVDGEQLARVEAQLAALNPAAPIQQVTNGELSPAVLEKLGAYNEAAGRDVR QLLAWLRTESPKQGLASPMQPKMQPFAAKVGTAAPTHFEHGNIESFSLRIGEPLKPSR LLAAIDAVQAQYGDALLRLKGILQLEGESQPVVIHGVHGQLYPLQALGDWPEGKAQSR LVFIVKSQDKAGIEQLFMATLKAPEPTLEERLKAMLGQPDN" misc_feature 407631..408674 /locus_tag="B565_0373" /note="Putative GTPases (G3E family) [General function prediction only]; Region: COG0523" /db_xref="CDD:30869" misc_feature 407634..408110 /locus_tag="B565_0373" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" misc_feature 408387..408671 /locus_tag="B565_0373" /note="Cobalamin synthesis protein cobW C-terminal domain; Region: CobW_C; cl08458" /db_xref="CDD:158345" gene complement(408719..411826) /locus_tag="B565_0374" /db_xref="GeneID:10486291" CDS complement(408719..411826) /locus_tag="B565_0374" /codon_start=1 /transl_table=11 /product="RND multidrug efflux transporter" /protein_id="YP_004391026.1" /db_xref="GI:330828074" /db_xref="GeneID:10486291" /translation="MIRPFIENGRLLLLTVALLLTAALAALQTLPRTEDPQLTSRFAS VVTHFPGASAERVEALVSEPIENRLRAQSEIKLIESSSRPGLSIINLELKDEVSDVEP VWSRVRDRLADLAAGLPAGASAPRLDDEKGYPFTRLVNVVWRGPGQPQLDRLARYSAE LERRARQLPGTEYVERVGAPQEEIEVRFDPLALSASGMSGEQLAQALSGADAKVAAGE LQGSHNRFQVEIRGALDTLERIRQIPLRTGEQGQTLRLGELAEVRRTLHQPESQLAFA NGERAVVVGLRMAQDHRIDLWSARVDTMLAQLQQDLPDNIGLVTSFDQQRYTDQRLNT LLINIVQGFLIIVAVLLVTLGVKAAIIVALSLPLTVAFSFACMNLINLPIHQMSVTGL VVALGIMVDNAIVMADRVQYQRRHGMAMSAAALEAIGHLWLPLLGSTLTTMLAFMPII LMPGPAGEFVGGIAWAVICSLLGSYLIAHTLVAGLAARWIGSDQGGRWYQDGLHLPRV SARFQQSIAMALAHPWRTLLLVSLLPLLGFWVAGRLTEQFFPPADRDMIHIEASLSPQ ASLARTRELALGISAELDNLPELVRQDWVVGDNAPSFYYNLVPRKQGRADYAQGMITL QDADAAERLIPQLQQRLDATFPEAQILVRKLEQGPPFNAPVELRLFGPDLEQLHRLGE ELRSLLANTPAVVQTRATLQAGAPKLWLQVDEEAARLAGMSLTDVASRLAGALDGRLG GTVLEGTESIPVRVRLAEPLRQDPDALLNVPLSLTGTGQQGAANLTLRALATPELLPS WGEISRRDGERVNVLEAYLAVGVLPQTVLEQVKERLAAKALALPPGYRLEFGGEAAKR DESVGNLMAHVSLVAVLLVAVLVLSFNSFRLAGIVTLVAIQSAGLGLLWVWLLGYPFG FTVIIALLGLMGLAINAAIVILAELKADPLAQQGNLPQIRDLVAGCSRHIVSTTITTV GGFIPLLLGGGGFWPPFAIAIAGGTALATLLSFYFVPVAFVLFNRRRPDPVQESCNAQ DQLSG" misc_feature complement(408911..411736) /locus_tag="B565_0374" /note="Cation/multidrug efflux pump [Defense mechanisms]; Region: AcrB; COG0841" /db_xref="CDD:31183" gene complement(411823..412923) /locus_tag="B565_0375" /db_xref="GeneID:10486292" CDS complement(411823..412923) /locus_tag="B565_0375" /codon_start=1 /transl_table=11 /product="RND family efflux transporter MFP subunit" /protein_id="YP_004391027.1" /db_xref="GI:330828075" /db_xref="GeneID:10486292" /translation="MTLCLILLALLLSGCSPVTESEETPALTRVIAQPLQASDHYPVL HRFNGRVIAPEHSQVGFELAGRIATLHKGRGEPVAAGELLATLDTRLLAVEAKELAAR AAQNEAELTLARQTLDRLTALRQQQFSSRQALDEQQGKVRMLEASANQLAAALEANRV KQEKSQLRAPFNGIVVSREQALGAVVAAGQPLFSLTRSGQWEADIGVPVKQAESLIVG QHYPLQSGEQSLEGRLLNLGVQVDGQTHTRTARFQLTRGGEQLAEGQLITLLHQTREP TRAYEVPLTALTQGLRGSWTLYLLNDETPPRVVSRDVTLLQQDGERAWISGALNGQEQ LVTDGLHKLVPGQQVTLTTSMDHQAGHPEPQS" misc_feature complement(411874..412785) /locus_tag="B565_0375" /note="RND family efflux transporter, MFP subunit; Region: RND_mfp; TIGR01730" /db_xref="CDD:162505" gene 413014..413622 /locus_tag="B565_0376" /db_xref="GeneID:10486293" CDS 413014..413622 /locus_tag="B565_0376" /codon_start=1 /transl_table=11 /product="putative TetR family transcriptional regulator" /protein_id="YP_004391028.1" /db_xref="GI:330828076" /db_xref="GeneID:10486293" /translation="MNISPRSQQKRAAILDAAGRLFCQHGLHLVSMDMVASEAGVSKQ TVYSHFANKESLFAEAVGSKCVSSELMPEVLLRGNNVRESLIAFGRSFRKLILSDDAI NIFRTCISCNDAQLATLFFEAGPLYVTEMLSNWLEQQKQQGLLCHQDSEQAALQLLLM WQGKERMLRELGLPLTQSAAEQDAWTLSCVDLFLTAAAPPQK" misc_feature 413014..413607 /locus_tag="B565_0376" /note="Transcriptional regulator [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:31500" misc_feature 413053..413193 /locus_tag="B565_0376" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene 413634..415049 /locus_tag="B565_0377" /db_xref="GeneID:10486294" CDS 413634..415049 /locus_tag="B565_0377" /codon_start=1 /transl_table=11 /product="EmrB/QacA family drug resistance transporter" /protein_id="YP_004391029.1" /db_xref="GI:330828077" /db_xref="GeneID:10486294" /translation="MSHTVTDAQRKWLPLLAAVGFFMQALDGTILNTALPSMAETLGE SPLQMQSVIIAYMLTVALLIPASGWLADRFGTRRIYLAAISLFTLGSLACAASNSLSM LVAARVLQGIGGALLMPVGRLAVLRVYDKHELLRVMSFVTIPGLLGPLMGPALGGWLV EVASWHWVFLINLPVGLLGFIASWHFMPELRQQTARFDWQGFVMFSVGMVLVSVGLQG LGEHSISTGWALFALIFGLAAMASYWLYAANAQQPLFSLNLFKTTTFAIGIWGNLFAR LGSGAMPFLTPLFLQLGLGFSPSKAGMTMIPTVIGAMLTKTLVNKLIPKVGYRRILIG NTLLLGAMIASFYFIDNQLPYGVLLGWLAIFGAINSLQFSAMNTLTLQDLSPTLASSG NGLLSVVMQLSMSLGVAIAASLLGLFSAGTSAGTLAAEGQWLAGFHLTYLCVGLLSML AALIFAQLARDGATPSGRADS" misc_feature 413664..415016 /locus_tag="B565_0377" /note="putative transporter; Provisional; Region: PRK10504" /db_xref="CDD:182502" misc_feature 413676..414527 /locus_tag="B565_0377" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature order(413715..413717,413724..413732,413736..413741, 413790..413792,413799..413804,413811..413813, 413823..413828,413832..413837,413973..413978, 413985..413990,413997..414002,414009..414011, 414045..414050,414057..414062,414078..414080, 414234..414236,414243..414248,414255..414260, 414267..414269,414309..414311,414321..414323, 414333..414335,414342..414344,414354..414356, 414498..414500,414507..414512,414519..414521) /locus_tag="B565_0377" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene complement(415021..415509) /locus_tag="B565_0378" /db_xref="GeneID:10486295" CDS complement(415021..415509) /locus_tag="B565_0378" /codon_start=1 /transl_table=11 /product="DNA-binding protein" /protein_id="YP_004391030.1" /db_xref="GI:330828078" /db_xref="GeneID:10486295" /translation="MPLDTIHHFNCQLLAELPHQRYKHEPILDYATDEKVKARLGWQA EFSKTLFLKFKDGRFALLLTHRDGRLDNKAVKAALGAKPSICTAEEMQAEIGCLPGAV CPFLPRADIPLLVDPQLLNHSAFTWTPGHPEQTFLLATEHLAEVLAQLPCEVSYLPAP TA" misc_feature complement(415066..415458) /locus_tag="B565_0378" /note="YbaK-like. The YbaK family of deacylase domains includes the INS amino acid-editing domain of the bacterial class II prolyl tRNA synthetase (ProRS), and it's trans-acting homologs, YbaK, ProX, and PrdX. The primary function of INS is to hydrolyze...; Region: YbaK_like; cd04332" /db_xref="CDD:88583" misc_feature complement(order(415126..415128,415207..415212, 415366..415368)) /locus_tag="B565_0378" /note="putative deacylase active site [active]" /db_xref="CDD:88583" gene complement(415636..416145) /locus_tag="B565_0379" /db_xref="GeneID:10486296" CDS complement(415636..416145) /locus_tag="B565_0379" /codon_start=1 /transl_table=11 /product="2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase" /protein_id="YP_004391031.1" /db_xref="GI:330828079" /db_xref="GeneID:10486296" /translation="MTTIYISLGSNIERDRHIRAGLDALHAEFGELRVSRVFESEAVG FNGRPFYNLVAAAETDLPLTTVCQRLRAMEFAHGREPDAKKFAPRTLDLDLLLYGDLV CDTPLVLPRGEVLTNAFVLWPLAELAPKLRHPVDGRTMGELWQAYDKASQQLCPIPFH WEACELQHH" misc_feature complement(415765..416136) /locus_tag="B565_0379" /note="7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after...; Region: HPPK; cd00483" /db_xref="CDD:29601" misc_feature complement(order(415789..415791,415795..415797, 415810..415815,415822..415824,415861..415866, 415870..415872,415879..415881,415888..415890, 415903..415905,415909..415911,415924..415926, 415933..415935,415945..415947,415990..415992, 415996..415998,416017..416019,416023..416028, 416119..416121)) /locus_tag="B565_0379" /note="catalytic center binding site [active]" /db_xref="CDD:29601" misc_feature complement(order(415795..415797,415810..415815, 415822..415824,415861..415866,415879..415881, 415903..415905,415909..415911,415924..415926, 415933..415935,415945..415947)) /locus_tag="B565_0379" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29601" gene complement(416145..416516) /locus_tag="B565_0380" /db_xref="GeneID:10486297" CDS complement(416145..416516) /locus_tag="B565_0380" /codon_start=1 /transl_table=11 /product="dihydroneopterin aldolase" /protein_id="YP_004391032.1" /db_xref="GI:330828080" /db_xref="GeneID:10486297" /translation="MDKVFIRGLEVLTTIGVYEWEKGIRQKLRFDLEMGFDNRPAAAT DDINLALDYADLSNKICEHVSGKVVELVETMAEQVAMLVLADERVQWVKVTLTKPGAV PNAAGVGVEILRHRTPAASSN" misc_feature complement(416175..416516) /locus_tag="B565_0380" /note="Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines...; Region: DHNA_DHNTPE; cd00534" /db_xref="CDD:29762" misc_feature complement(order(416181..416204,416214..416219, 416439..416465,416481..416513)) /locus_tag="B565_0380" /note="homooctamer interface [polypeptide binding]; other site" /db_xref="CDD:29762" misc_feature complement(order(416187..416189,416223..416225, 416298..416309,416454..416456,416463..416471)) /locus_tag="B565_0380" /note="active site" /db_xref="CDD:29762" gene 416626..417336 /locus_tag="B565_0381" /db_xref="GeneID:10486298" CDS 416626..417336 /locus_tag="B565_0381" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate acyltransferase" /protein_id="YP_004391033.1" /db_xref="GI:330828081" /db_xref="GeneID:10486298" /translation="MWPASYPIHIVVKTTKMTALTILMIILAYLGGSLSSAVLVSRCS GLPDPRDHGSHNPGATNVLRLGGRMAALVVLLLDVLKGTVPVYLAWYLQIKPVYLGFI GVAACLGHMYPIFFHFRGGKGVATALGTMMPIGFTMGGAVIGTWLLVLLVSGYSSLAS IITVLLTPLFTYLLKPEYTLPVSLLSCLILIRHHENISRLLKGEEPRVWGRKRAACAE EVAEMDDVAQKRDERDKK" misc_feature 416674..417261 /locus_tag="B565_0381" /note="Domain of unknown function (DUF205); Region: DUF205; cl00410" /db_xref="CDD:193806" gene 417384..417459 /locus_tag="B565_t010" /db_xref="GeneID:10486299" tRNA 417384..417459 /locus_tag="B565_t010" /product="tRNA-Phe" /db_xref="GeneID:10486299" gene 417512..417587 /locus_tag="B565_t011" /db_xref="GeneID:10489995" tRNA 417512..417587 /locus_tag="B565_t011" /product="tRNA-Thr" /db_xref="GeneID:10489995" gene 417591..417666 /locus_tag="B565_t012" /db_xref="GeneID:10489996" tRNA 417591..417666 /locus_tag="B565_t012" /product="tRNA-Phe" /db_xref="GeneID:10489996" gene 417675..417750 /locus_tag="B565_t013" /db_xref="GeneID:10489997" tRNA 417675..417750 /locus_tag="B565_t013" /product="tRNA-Asn" /db_xref="GeneID:10489997" gene 417913..419028 /locus_tag="B565_0382" /db_xref="GeneID:10489998" CDS 417913..419028 /locus_tag="B565_0382" /codon_start=1 /transl_table=11 /product="transporter gate domain-containing protein" /protein_id="YP_004391034.1" /db_xref="GI:330828082" /db_xref="GeneID:10489998" /translation="MEPVLVLLILGSLFGYLGSQMGLSAMVNTLFNTAHQLLLNTVLF IMGITVLSGALSQLLSEFGVIRLLEVLLAPLMKPVFRLPGRTALAALMTFFSDNPAVI SLAKDSRFRKGFTPWQLVSLTNFGTAFGMGLIVVTFMATLQLPSGESTASAALIGLLG ALVGSVVSTRLMQRMIRPLVGEVLNDDAVSSDGRKVGVTKEAAPGWLRILNSLLDGGK SGVELGMAVIPGVLIISTFVMLLTFGPGDKGYTGEAFQGVALLPVLAAKVSWLFDLLF GFQQPELVAFPATSLGAVGAAMSLVPPFIAKGWITGNEVAVFTAMGMCWSGFLSTHTA MLDALGYRHLTSRAIVAHTIGGLCAGVAAHQLYLLLG" misc_feature 418036..418332 /locus_tag="B565_0382" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" gene 419581..420096 /locus_tag="B565_0383" /db_xref="GeneID:10486300" CDS 419581..420096 /locus_tag="B565_0383" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391035.1" /db_xref="GI:330828083" /db_xref="GeneID:10486300" /translation="MGIPQNKAELLLAIETNFGKLLKALQAVPESRVREPTLAGHSKG TSMSVANLLAYLIGWNELLIKWIERDAVGLAVDFPETGFKWNELGRLAHTFYRDYEGL SYQALLQRLAAARGRIIELVEARSDQQLYGCFWYEKWTLGRMIQFNSASPYLNANGRL RKWLKELAIRV" misc_feature 419581..420075 /locus_tag="B565_0383" /note="Protein of unknown function (DUF1706); Region: DUF1706; cl01748" /db_xref="CDD:154568" gene 420331..420786 /locus_tag="B565_0384" /db_xref="GeneID:10486301" CDS 420331..420786 /locus_tag="B565_0384" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391036.1" /db_xref="GI:330828084" /db_xref="GeneID:10486301" /translation="MISSLLPLASIALKLGSQLLGSSAKPQPVPQTVQEDRLPPTVQS LFQRLGIKDADSEQNRAAINHFMGDLMQTLGQENSGQSLPAAINSARNQLASGTQSTR LDALQSELDTLKGTLGASDLNLDQLLGAFKQTLPNGKGEGVGKLLNASA" gene complement(420862..422247) /locus_tag="B565_0385" /db_xref="GeneID:10486302" CDS complement(420862..422247) /locus_tag="B565_0385" /codon_start=1 /transl_table=11 /product="amino-acid acetyltransferase" /protein_id="YP_004391037.1" /db_xref="GI:330828085" /db_xref="GeneID:10486302" /translation="MALWGGRFSQGADSRFKQFNDSLRFDYRLAEQDIQGSMAWAKAL VKVGVLTADEQGKLQQAMEVLLASVQQDPQQILSSDAEDIHSWVESQLIAAVGDLGKK LHTGRSRNDQVATDLKLWCKAQGELLLGSITALQQGLIASARANQAAVLPGYTHLQRA QPVTYAHWALAYVEMLERDYSRLQDALKRLDTSPLGCGALAGTAYAIDREALALDMGF AGATRNSLDSVSDRDHVVELMHVASLSMTHLSRFAEDLIFYNTGEAGFVELSDAVTSG SSLMPQKKNPDALELIRGKTGRVVGAQMGMLMSLKALPLAYNKDMQEDKEGLFDALDT WHDCLDMAALVLIDLKVNGERTMAAAQGGYANATELADYLVAKGIPFREAHHIVGETV VFAISVGKPLEELSIGEFQRFSPVIEFDVYPNLELEATLAKRVAKGGVAREQVEAALT AAETWLAKRVG" misc_feature complement(420913..422247) /locus_tag="B565_0385" /note="argininosuccinate lyase; Provisional; Region: PRK04833" /db_xref="CDD:179883" misc_feature complement(420913..422184) /locus_tag="B565_0385" /note="Argininosuccinate lyase (argininosuccinase, ASAL); Region: Argininosuccinate_lyase; cd01359" /db_xref="CDD:176463" misc_feature complement(order(421273..421278,421282..421284, 421291..421293,421297..421299,421378..421380, 421387..421389,421393..421395,421417..421419, 421423..421425,421552..421554,421780..421785, 421909..421911,421918..421926,421993..421995, 421999..422001,422170..422172,422182..422184)) /locus_tag="B565_0385" /note="active sites [active]" /db_xref="CDD:176463" misc_feature complement(order(420928..420942,420946..420948, 421084..421086,421093..421095,421102..421107, 421120..421122,421132..421134,421147..421149, 421228..421230,421237..421239,421270..421272, 421279..421281,421288..421299,421321..421329, 421333..421335,421342..421350,421354..421371, 421375..421380,421387..421389,421393..421401, 421405..421416,421432..421434,421456..421458, 421465..421470,421483..421488,421495..421500, 421504..421509,421516..421518,421528..421530, 421537..421539,421549..421551,421555..421560, 421567..421581,421621..421623,421630..421632, 421636..421650,421681..421683,421693..421695, 421702..421707,421714..421716,421732..421737, 421747..421749,421765..421788,421933..421938, 421945..421947,421954..421956)) /locus_tag="B565_0385" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:176463" gene complement(422459..423694) /locus_tag="B565_0386" /db_xref="GeneID:10486303" CDS complement(422459..423694) /locus_tag="B565_0386" /codon_start=1 /transl_table=11 /product="argininosuccinate synthase" /protein_id="YP_004391038.1" /db_xref="GI:330828086" /db_xref="GeneID:10486303" /translation="MSGINKIVLAYSGGLDTSAIIPWLKEHYDAEIIAFVADVGQERD DLEGIEQKAIASGATKCIIKDLREEFVKEYVYPTLKTGAVYEGTYLLGTSMARPVIAK AMVEAALAEGADAISHGCTGKGNDQVRFEGAVAALAPQLKVIAPWRIWDMRSREDLLA YLETRNIPCKATLKKIYSRDANAWHISTEGGELESTWNEPSEAVWQWTVPAEQAPDQP EYVKLTVAQGEVVAVDDQPLSPHQILMTLNERAGKHGVGRIDITENRMVGMKSRGCYE TPGGTVMVAALRAVEELVLDRPTRAWREKLGAEFSHLVYDGRWFTPLCKAILASANAI AEDLDGEVVLKMYKGQVTAVQKKSPNSLYSEDFATFGADEVYDQSHAEGFIRLYTLAS RIRAMKEQHQAIGGDHTHG" misc_feature complement(422498..423694) /locus_tag="B565_0386" /note="Argininosuccinate synthase [Amino acid transport and metabolism]; Region: ArgG; COG0137" /db_xref="CDD:30486" misc_feature complement(422525..423676) /locus_tag="B565_0386" /note="Argininosuccinate synthase. The Argininosuccinate synthase is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate . In...; Region: Argininosuccinate_Synthase; cd01999" /db_xref="CDD:30186" misc_feature complement(order(423158..423163,423305..423307, 423338..423340,423404..423406,423572..423574, 423584..423586,423590..423592,423644..423646, 423665..423667)) /locus_tag="B565_0386" /note="ANP binding site [chemical binding]; other site" /db_xref="CDD:30186" misc_feature complement(order(422750..422752,422870..422872, 422906..422908,423128..423130,423134..423136, 423155..423163,423308..423310,423320..423322, 423413..423418,423428..423430)) /locus_tag="B565_0386" /note="Substrate Binding Site II [chemical binding]; other site" /db_xref="CDD:30186" misc_feature complement(order(423317..423325,423332..423337)) /locus_tag="B565_0386" /note="Substrate Binding Site I [chemical binding]; other site" /db_xref="CDD:30186" gene complement(423750..424661) /locus_tag="B565_0387" /db_xref="GeneID:10486304" CDS complement(423750..424661) /locus_tag="B565_0387" /codon_start=1 /transl_table=11 /product="Ornithine carbamoyltransferase" /protein_id="YP_004391039.1" /db_xref="GI:330828087" /db_xref="GeneID:10486304" /translation="MQHLLKDSDLNKAQIEALIALGKAVKADPKKYNQALAGKSVVTL FEKPSLRTRVTFDIGIAKLGGHSVYLDQQNGALGKRESVKDFAANLSRWCDAIVARVF DHQTLVELAEHGTVPVVNSLCNLYHPCQGLADFMTIAEHYDDLSKVKLAYLGDGNNVS HSLLLLGATLGTDVTLICPKGHGPDTQIFLQAQALAAKSGATIHISDDVADIEGFDVA YTDTWVSMGDNTPMEQVKDLFMPYQINQALLDRTGIQHVLHCQPAHRELEITSQVMDG PASLIMDEAENRMHIQNAVLLTLLGGK" misc_feature complement(423756..424661) /locus_tag="B565_0387" /note="ornithine carbamoyltransferase; Provisional; Region: PRK14805" /db_xref="CDD:184827" misc_feature complement(424239..424658) /locus_tag="B565_0387" /note="Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Region: OTCace_N; pfam02729" /db_xref="CDD:190401" misc_feature complement(423765..424220) /locus_tag="B565_0387" /note="Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Region: OTCace; pfam00185" /db_xref="CDD:189438" gene complement(424687..425466) /locus_tag="B565_0388" /db_xref="GeneID:10486305" CDS complement(424687..425466) /locus_tag="B565_0388" /codon_start=1 /transl_table=11 /product="acetylglutamate kinase" /protein_id="YP_004391040.1" /db_xref="GI:330828088" /db_xref="GeneID:10486305" /translation="MDKQTLVIKLGGALIENDEALTALFATLKTFLDDQHRPLVLVHG GGCLVDDLLKGLGLTSTKKNGLRVTPFEQIPFIAGALAGTANKQMMAKAIATGIPAVG LCLADGGLCQVTQLDPDLGAVGECKPGNPALVAGILGQGFLPVVSSIGITAEGQLMNV NADQAATAIAEALGADLVMLSDVSGILDGKGKLVPQLDKLTALDLMEKGVIRDGMAVK VEAALHAAETLGKPVCVASWRYPDQLLKLLAGGAVGTQVAI" misc_feature complement(424696..425451) /locus_tag="B565_0388" /note="Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that...; Region: AAK; cl00452" /db_xref="CDD:193824" misc_feature complement(order(424906..424911,424918..424923, 425428..425436,425440..425442)) /locus_tag="B565_0388" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:58599" misc_feature complement(order(424978..424986,425329..425337, 425431..425436,425440..425442)) /locus_tag="B565_0388" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:58599" gene complement(425489..426496) /locus_tag="B565_0389" /db_xref="GeneID:10486306" CDS complement(425489..426496) /locus_tag="B565_0389" /codon_start=1 /transl_table=11 /product="N-acetyl-gamma-glutamyl-phosphate reductase" /protein_id="YP_004391041.1" /db_xref="GI:330828089" /db_xref="GeneID:10486306" /translation="MLNTVIVGASGYAGAELAALVQNHPQLKLFGLYVSAGSQDAHKR FSSLHPQWVGALDQPLLPLDDDGMTRILTQADLVLLATAHEVSAELAPKFLAKGLPVF DLSGAFRVKDQGFYDSFYGFTHDSEQWLDQAVYGLAEWNADAIATAQLIAVPGCYPTA SLCAIKPLQQDGLIAKGWQPIINAVSGVSGAGRKAAINTSFCEVSLNPYGTFNHRHQP EISHHLGKEVLFQPHLGNYVRGILATIYVQLADGVTPTQVDQAFLKAYEGKPLVRLTG QMPSIRGVAGTPYCDIAWQQQGNMLVVVSAIDNLLKGAASQAMQCINIKFGFEPATGL I" misc_feature complement(425495..426496) /locus_tag="B565_0389" /note="N-acetyl-gamma-glutamyl-phosphate reductase; Validated; Region: argC; PRK00436" /db_xref="CDD:179024" misc_feature complement(426053..426481) /locus_tag="B565_0389" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(425561..426004) /locus_tag="B565_0389" /note="Semialdehyde dehydrogenase, dimerisation domain; Region: Semialdhyde_dhC; pfam02774" /db_xref="CDD:145758" gene 426768..427913 /locus_tag="B565_0390" /db_xref="GeneID:10486307" CDS 426768..427913 /locus_tag="B565_0390" /codon_start=1 /transl_table=11 /product="acetylornithine deacetylase" /protein_id="YP_004391042.1" /db_xref="GI:330828090" /db_xref="GeneID:10486307" /translation="MANLDFFSLYKNIIAIPSISSTDPKWDQSNEAVIRLLADWFGQL GFQCEVTALPDLPGKFNLVATIGQGEGGLLLAGHTDTVPFDEGGWSKDPFKVTEEGNR LYGLGTIDMKGFFAFIVEALKEIDLTKLTKPLRILATADEETTMAGARAIAAAAELKP DYAVIGEPTGLVPVVAHKGHMSEAIRITGKSGHSSDPANGVNAMEIMHKAMGQVLRLQ QDLKERFADHRFAVPQPTLNLGYIQGGDSPNRICGCCELHIDLRPTPQVGPDELMGML KEALSPIEIHQPGCLHLQHLHEPIPAYACADDSVLVREAEKASGRAAESVNYCTEAPF IQQLGCQTIVMGPGHITQAHQPDEYLDLSFVKPTTTVLQHLIRRFCL" misc_feature 426768..427910 /locus_tag="B565_0390" /note="acetylornithine deacetylase; Provisional; Region: PRK05111" /db_xref="CDD:179939" misc_feature 426789..427895 /locus_tag="B565_0390" /note="M20 Peptidase acetylornithine deacetylase; Region: M20_ArgE; cd03894" /db_xref="CDD:193514" misc_feature order(426999..427001,427095..427097,427191..427196, 427266..427268) /locus_tag="B565_0390" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193514" misc_feature order(427311..427313,427344..427355,427371..427373, 427377..427382,427389..427394,427398..427403, 427410..427412,427473..427475,427479..427502, 427518..427523,427545..427547,427551..427553, 427746..427748) /locus_tag="B565_0390" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:193514" gene 428145..430778 /locus_tag="B565_0391" /db_xref="GeneID:10486308" CDS 428145..430778 /locus_tag="B565_0391" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate carboxylase" /protein_id="YP_004391043.1" /db_xref="GI:330828091" /db_xref="GeneID:10486308" /translation="MNEKYAALRANVGMLGQLLGKSIKDHQGQAFLDKIETIRQLAKS SRKGNESDRERLLDTLRTLSDDELLPVARAFSQFLNLANVAEQFHTISRRCEEQVCTP DPLEQMFDKLKASNLSQEAIIQAVRELDIDLVLTAHPTEVTRRTLIHKHVQLNDCLEA LELSDLLPRERDKILNRIEQLINQAWHTNEIREQRPTPVDEAKWGFAVVENSLWPAIP EFMRNLDERLQHHLGVRLPLDAAPVKFTSWMGGDRDGNPFVTAKVTAEVLELGRWMAV SLFYKDIKELTSELSMSDCTDAVRARVGDHPEPYRALVRELREALRETKEHLTAKVQG QASESQDLVKTTAQLREPLELCYHSLHACGMGNIADGMLLDVLRKVACFGIHLVKLDI RQDGERHGLVFSELTRYLGLGDYAEWSEDDKQAFLLNELNSRRPLIPHDWEPSAEVRE TLDTCQVIAEHDPDAFGIYIISMAGAPSDVLSVQLLLKEAGCKFRMPVAPLFETQDDL MAGTAVMERLLSVDWYRGYIQGRQYVMIGYSDSAKDAGMMAAGWAQYAAMESLVGLAE ANNIRLTLFHGRGGTVGRGGAPAHQAILSQPPGSLRGGLRTTEQGEMIRFKFGLPKVA IKSLELYTSAVLEGNLLPPPKPKECWREVMEQLAADSCDHYRSIVRGHPDFVPYFRAA TPEMELGKLPLGSRPSKRKPNGGVESLRAIPWIFAWTQNRLMLPAWLGAHKALQQAID GGKLAVLEEMSAQWPFFRTRLEMLEMVFLKADVWLAEYYDTRLVPQELWGLGKQLRQE LAESIEVVLKLSTRGDLLEDQPWIKESIKLRNPYTDPLNVLQAELLNRSRNHPETLHP ELDKALMVTIAGIAAGMRNTG" misc_feature 428145..430775 /locus_tag="B565_0391" /note="Phosphoenolpyruvate carboxylase [Carbohydrate transport and metabolism; Energy production and conversion]; Region: COG1892; cl14656" /db_xref="CDD:187410" misc_feature 428148..430775 /locus_tag="B565_0391" /note="Phosphoenolpyruvate carboxylase [Energy production and conversion]; Region: Ppc; COG2352" /db_xref="CDD:32499" gene complement(431150..431725) /locus_tag="B565_0392" /db_xref="GeneID:10486309" CDS complement(431150..431725) /locus_tag="B565_0392" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391044.1" /db_xref="GI:330828092" /db_xref="GeneID:10486309" /translation="MKLCLTTALLLCSISSANANTCPLSNCNTLHAGENYSINADGKY CINFNKENITVVNLSSRYIEIEDKNSNPTVIYPGEFVDVDTISTIANSTKVVISIEHD SFIVIRDINESKRNKRAAPALVWAGGGAVMGAMGVIANNPDASMREIAAGVFGGAVTG RLSPIMGSGVAGMMASGSAGLAASGGCASCH" gene complement(431950..432267) /locus_tag="B565_0393" /db_xref="GeneID:10486310" CDS complement(431950..432267) /locus_tag="B565_0393" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391045.1" /db_xref="GI:330828093" /db_xref="GeneID:10486310" /translation="MKNAIVTARFDAISTEGEQLTLKIAIKAPEPDPKSASGDWRCKV KLAGLSDKTFIYGIDSLQALSLAIKFVETELRAFSDAGWQFYLPNCPDHPIDMSACYF PAL" gene 432616..433506 /locus_tag="B565_0394" /db_xref="GeneID:10486311" CDS 432616..433506 /locus_tag="B565_0394" /codon_start=1 /transl_table=11 /product="GGDEF family protein" /protein_id="YP_004391046.1" /db_xref="GI:330828094" /db_xref="GeneID:10486311" /translation="MALSVTQLYEVMAQLPDPVFILSEDGYYVEYIGGMEQQSYHDGN PLAGKQLADVLPPEMAMWVKAQVAESLANGQVRVVEYELSAVEVGGINAAVGPQGIQR FEGKIAPLPSLYDGKRAVAWVTRNITRQYELQQRLLRQSETDQLTGLYNRRFFFEHCQ PLRAGEAPCGLIMLDIDHFKQLNDRYGHQQGDRALQRFSSCIDALLRADDLFVRSGGE EFLILLPRIDEAGLLQMAEQIRAAVEALPADPVAITVSLGTTLVQPEEEINQALARAD EWLYRAKRAGRNRVAHCSAG" misc_feature 433042..433488 /locus_tag="B565_0394" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(433138..433140,433267..433269) /locus_tag="B565_0394" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(433153..433155,433162..433167,433177..433179, 433189..433191,433255..433257,433261..433272) /locus_tag="B565_0394" /note="active site" /db_xref="CDD:143635" misc_feature order(433243..433245,433327..433329) /locus_tag="B565_0394" /note="I-site; other site" /db_xref="CDD:143635" gene 433978..435252 /locus_tag="B565_0395" /db_xref="GeneID:10486312" CDS 433978..435252 /locus_tag="B565_0395" /codon_start=1 /transl_table=11 /product="serine transporter" /protein_id="YP_004391047.1" /db_xref="GI:330828095" /db_xref="GeneID:10486312" /translation="MSVSIAEKSNPVSKLKWEKSDSVWTMGLYATAVGAGTLFLPITV GSNSPVILLFILLLAFPLSYYSHRALSRFVLSSSHREGDITHVVEEHFGAKAGKLLML VYLMAFYPIILVYSISITNAIQSFVVHQLGDAELPRGLLVLGVMLGLHLVLLAGKQIV VSAISVLALPMVAFLIGLSIYLLPQWSLSYFSESQSVDWRDPAFWKSLWLIVPVMVFS FSHAPIISSFSAAQKKRCQENADLRAKRIIKCSSMLICGSVLFFVVSCVMSLSQAEMA LARTDNISVLSALANKFSNPLIAYVGPLIAILAMSKSFLGTSMGVSEGTVSMVSGACQ GLGLSLKESTIARVSSVILFMVTAVITYLNPNVLDIIERVSGPLIAVILFLLPACSIY RLPALKRYRGPSTLFVLVMGLLAISALIYDLL" misc_feature 434008..435240 /locus_tag="B565_0395" /note="Amino acid permeases [Amino acid transport and metabolism]; Region: SdaC; COG0814" /db_xref="CDD:31156" misc_feature 434026..435219 /locus_tag="B565_0395" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene complement(435319..435957) /locus_tag="B565_0396" /db_xref="GeneID:10486313" CDS complement(435319..435957) /locus_tag="B565_0396" /codon_start=1 /transl_table=11 /product="protein ExoD" /protein_id="YP_004391048.1" /db_xref="GI:330828096" /db_xref="GeneID:10486313" /translation="MVAAQLNDPKTTLADTLRATAHAIDESHISLRQMLALVGEQGML LFCVLLTVPFLLPVSIPGVSTPFGLLILFIGIGITLNRVPWLPSMLMERRFAADQLKP TLHKGAELLARVDRVIRPRLLVLTGSNTVNRCNGLLIMLAALLLMLPLGAIPFTNAMP AWAILLLATGMLQRDGLFIASGYLLVSATLVWFSVLAIGLLMAGQSASGLLG" misc_feature complement(435367..435921) /locus_tag="B565_0396" /note="Exopolysaccharide synthesis, ExoD; Region: ExoD; cl01617" /db_xref="CDD:154502" gene 436170..436832 /locus_tag="B565_0397" /db_xref="GeneID:10486314" CDS 436170..436832 /locus_tag="B565_0397" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391049.1" /db_xref="GI:330828097" /db_xref="GeneID:10486314" /translation="MLSAQSHREQGMMMKRAGIAMMGLLLPLGQAWSSEAAITSGWQV TPFFGYSSAIDFEKSDEVVLPVPVSASLDSLQGQGSGSWGLFISKEVDDPGMIELLYS HQSTTLSPDLPDRLTVDTLHFAGALTLSDNLMAPYIGAGIGVTRFAAYDSEVTPSMSL ALGVQPRLAEHLALRAEVRGYGSLVNDNNQFLCNPEQCVFKVRGELVTQWQANIGLTF RF" gene complement(436923..437846) /locus_tag="B565_0398" /db_xref="GeneID:10486315" CDS complement(436923..437846) /locus_tag="B565_0398" /codon_start=1 /transl_table=11 /product="GGDEF domain-containing protein" /protein_id="YP_004391050.1" /db_xref="GI:330828098" /db_xref="GeneID:10486315" /translation="MQFDRLDISLSHYRHLDREHRVHISLLGIVMLAIMALHLLLLPH FPYERFYAVSFGFEVINWLTMLFLFWVVQCAHLPTHTYRMLSCGLMLWIMGATADIMD ELVAQPLWLAIYAEDLLRSSGILLSSIGILSTMHHLFHINTQLRQQALFDDLTRLPNR RYFHQQLFLEQGICHTLILLDLDHFKLINDNYGHDIGDRVLQQFGELLQQHCPPGALA ARVGGEEFALLLPVAHEAELQQLANTLLTATRTIAPDPTHTMTVSLGVGIREPKEPAV SLFKRVDQALYGAKEAGRNCAVWAMPTNKEV" misc_feature complement(436953..437399) /locus_tag="B565_0398" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(437175..437177,437304..437306)) /locus_tag="B565_0398" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(437172..437183,437187..437189, 437253..437255,437265..437267,437277..437282, 437289..437291)) /locus_tag="B565_0398" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(437121..437123,437199..437201)) /locus_tag="B565_0398" /note="I-site; other site" /db_xref="CDD:143635" gene 438352..439779 /locus_tag="B565_0399" /db_xref="GeneID:10486316" CDS 438352..439779 /locus_tag="B565_0399" /codon_start=1 /transl_table=11 /product="Ammonium transporter" /protein_id="YP_004391051.1" /db_xref="GI:330828099" /db_xref="GeneID:10486316" /translation="MVKKWMMAGLTMLPALLVTPSWAEEVAQVQAAVAPVAAMTINKG DNTWMLLSAALVILMSIPGLALFYGGLVRAKNMLSVLMQVFTLFCLICVLWVIYGYSL AFTEGGNFYGSFSKVLLKGVTPDSIAATFSKGVGISELIYVVFQGAFAAITCGLIVGA FAERIKFAAVLLFSVIWFTFAYIPLAHMVWYWAGPDAYTSAEAAATATATAGYLFQHG ALDFAGGTVVHINAAVAGLVGAYLVGKRLGYGRDPMTPHSLTMTMIGASLLWFGWFGF NAGSALEANGIAALAFINTWVAPAAAALSWTLAEWVMKGRPSLLGAASGAVSGLVVIT PAAGFVGVGGGLVMGLISGVAGLWGVHGLKRLLGADDSLDVFGVHGVCGILGALLTGV FASPDLGGTGVWDYVTNQVAEGYSILTQVKIQAIGVGVTLLWSGAVAAIAFKAVDMLV GLRVNGDAEREGLDVTSHGEKAYSM" misc_feature 438469..439770 /locus_tag="B565_0399" /note="Ammonium Transporter Family; Region: Ammonium_transp; cl03012" /db_xref="CDD:194508" gene complement(439862..440329) /locus_tag="B565_0400" /db_xref="GeneID:10486317" CDS complement(439862..440329) /locus_tag="B565_0400" /codon_start=1 /transl_table=11 /product="15kd peptidoglycan-associated outer membrane lipoprotein" /protein_id="YP_004391052.1" /db_xref="GI:330828100" /db_xref="GeneID:10486317" /translation="MLKRMTLIALLAATTITGCANSDVYSGDVYTKDRAKQVQTVSYG TIISTRPVKIQADENSLIGTIGGAVVGGLLGSTVGGGTGRDIAAAGGAIAGAAAGNAI GNKMNQVDGVELEIKKENGEAIVVVQKASPTFTPGARVRMTQGNGSINVAVVN" misc_feature complement(439874..440278) /locus_tag="B565_0400" /note="Glycine zipper 2TM domain; Region: Rick_17kDa_Anti; cl10470" /db_xref="CDD:195970" gene complement(440427..440924) /locus_tag="B565_0401" /db_xref="GeneID:10486318" CDS complement(440427..440924) /locus_tag="B565_0401" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004391053.1" /db_xref="GI:330828101" /db_xref="GeneID:10486318" /translation="MHHNPPLLRPATHHDMHAIWQIDAKVFGEDVYPAFFFRQAMDLW PELLLVAEYEGQLVGYVLGGFGQERSQGWVLSLAVLPEARGFGLAERMMRQMEANQQA LQISELRLTVDPANPAQRLYYRLGYTLQAEIADYFGPGEDRLLLVKTLSSTAAIQGQN RLQNA" misc_feature complement(440487..440882) /locus_tag="B565_0401" /note="ribosomal-protein-alanine acetyltransferase; Region: rimI; TIGR01575" /db_xref="CDD:162430" misc_feature complement(440592..440783) /locus_tag="B565_0401" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cd04301" /db_xref="CDD:173926" misc_feature complement(order(440655..440660,440688..440696)) /locus_tag="B565_0401" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene complement(441036..441362) /locus_tag="B565_0402" /db_xref="GeneID:10486319" CDS complement(441036..441362) /locus_tag="B565_0402" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391054.1" /db_xref="GI:330828102" /db_xref="GeneID:10486319" /translation="MREQQTVSAMIRLYCQHHHQDPHCRHCRQLRDFAHQRLRRCRYG HDHKPTCANCNIHCYAPAMRKQIQQVMKWSGPRMLLRHPWLTLRHLLDGLRKAPKLPQ SRPLPP" misc_feature complement(441048..441359) /locus_tag="B565_0402" /note="Nitrous oxide-stimulated promoter; Region: YgbA_NO; cl08119" /db_xref="CDD:186778" gene complement(441529..443331) /locus_tag="B565_0403" /db_xref="GeneID:10486320" CDS complement(441529..443331) /locus_tag="B565_0403" /codon_start=1 /transl_table=11 /product="aminopeptidase P" /protein_id="YP_004391055.1" /db_xref="GI:330828103" /db_xref="GeneID:10486320" /translation="MNNFEIIETRVAQVRAELAMQELDAFIVPHDDEHLGEYIPAYAE RLDWITGFNGSAGVAIIMAQRAALFVDGRYTVQARMQTPAELFEFLHLIENPHVQWLA EQLPSGSRVGFDARLHSLTWYKNAKAVLADRGIELIRVEQNPIDLNWSDRPEPTKSPV ILYSEELAGQSSQSKREQLAADLRKRGLDAVLLTQAEPINWLLNLRGRDIDRLPVVLG FAVLYANTSMDFFVDTDKIDCFAFTQHVGQDVSVYPIDKLGDVLQRIGEDQQKVLADP DSANAWTQLVMEEAGAILVAGQDPTMLPKACKNEIELTGMRAAHLRDGVAMTRFLAWL DRLVASGEFEGVDEGTLADQVEAFRREQEHYVEPSFDTISALGPNAAMCHYHHTNGTP RAFGQDSLYLLDSGAQYMDGTTDITRTIKVGEVSDEQKAMFTRVLQGHIALDQARFPR GTAGIQLDVLARMPLWQAGYNYDHGTGHGVGHFLSVHEGPQRIAPKGSMVALQPGMVL SNEPGYYREDGFGIRCENLVVVTELEQVGELPMLGFERLTYVPFDTRLIDRSLLSPAE FRWINEYHVEVFRRLSPLLEGEDLAWLEQATSLI" misc_feature complement(442906..443304) /locus_tag="B565_0403" /note="Creatinase/Prolidase N-terminal domain; Region: Creatinase_N; pfam01321" /db_xref="CDD:189940" misc_feature complement(441661..442818) /locus_tag="B565_0403" /note="Xaa-Pro aminopeptidase [Amino acid transport and metabolism]; Region: PepP; COG0006" /db_xref="CDD:30356" misc_feature complement(441727..442389) /locus_tag="B565_0403" /note="X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline...; Region: APP; cd01085" /db_xref="CDD:29970" misc_feature complement(order(441757..441759,441799..441801, 441886..441888,442087..442089,442120..442122, 442180..442182)) /locus_tag="B565_0403" /note="active site" /db_xref="CDD:29970" gene complement(443365..444030) /locus_tag="B565_0404" /db_xref="GeneID:10486321" CDS complement(443365..444030) /locus_tag="B565_0404" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_004391056.1" /db_xref="GI:330828104" /db_xref="GeneID:10486321" /translation="MTPPYKTRTQMVMENLRGRILRGEFPAGAPLRQDAIAKELAVSR IPVREALMQLEAQGLVKFEAHRGAVVTMLDASAIEELFYLRALLEADTLFHAVDKMTE ATFAQAEAILAQFDHALESGTQIEHWAELNHSFHATLYQAAGRPQALELIAQINLSCD RYVRFELLFASDGVDKAEREHAQLLELCRARRKHEAVVLLRQHIEAAGQSIKRILASG HKN" misc_feature complement(443377..444030) /locus_tag="B565_0404" /note="Transcriptional regulators [Transcription]; Region: GntR; COG1802" /db_xref="CDD:31987" misc_feature complement(443818..444012) /locus_tag="B565_0404" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature complement(order(443827..443838,443842..443847, 443875..443877,443884..443889,443893..443907, 443929..443934,443935..443937,444004..444006, 444010..444012)) /locus_tag="B565_0404" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature complement(443413..443793) /locus_tag="B565_0404" /note="FCD domain; Region: FCD; cl11656" /db_xref="CDD:196275" gene complement(444224..445849) /locus_tag="B565_0405" /db_xref="GeneID:10486322" CDS complement(444224..445849) /locus_tag="B565_0405" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate carboxykinase" /protein_id="YP_004391057.1" /db_xref="GI:330828105" /db_xref="GeneID:10486322" /translation="MTIVAEPTLAQQLGLDQYGIKNSQEIVRNPSYEQLFAEETRPDL EGFERGVVTELGAVNVNTGIFTGRSPKDKYIVKDATTQDTVWWSDQGKNDNKAITPEV WSHLKGLVTKQLSGKRLFVVDGFCGANPDTRLAVRIITEVAWQAHFVKNMFIRPSDEE LKTFKPDFVVMNGAKCTNPNWKEQGLNSENFVAFNMTEKMQLIGGTWYGGEMKKGMFS MMNYFLPLRGIASMHCSANVGQDGDVAIFFGLSGTGKTTLSTDPKRQLIGDDEHGWDD HGVFNFEGGCYAKTIKLSEEAEPDIYHAIRRDALLENVTVAADGTIDFDDGSKTENTR VSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSKLTKEQTKYHFLSGFTAKL AGTERGITEPTPTFSSCFGAAFLSLHPTKYGQELVKRMEAAGAEAYLVNTGWNGTGKR ISIKDTRAIIDAILDGSIEKAETKVLPIFNLEIPTALHDVNPAILDPRDTYADKAEWD AKAVDLAGRFIKNFERFTDNDEGKRLVAAGPQL" misc_feature complement(444236..445780) /locus_tag="B565_0405" /note="Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis. It catalyzes the reversible decarboxylation and...; Region: PEPCK_ATP; cd00484" /db_xref="CDD:29830" misc_feature complement(order(444482..444484,444491..444493, 444500..444502,444848..444850,444956..444958, 444983..444985,444989..444991,445040..445045, 445079..445099,445151..445153,445208..445213, 445220..445222,445226..445228,445646..445648)) /locus_tag="B565_0405" /note="active site" /db_xref="CDD:29830" misc_feature complement(order(444848..444850,444989..444991, 445208..445213,445220..445222,445226..445228, 445646..445648)) /locus_tag="B565_0405" /note="substrate-binding site [chemical binding]; other site" /db_xref="CDD:29830" misc_feature complement(order(444989..444991,445040..445045, 445082..445084,445151..445153,445208..445210)) /locus_tag="B565_0405" /note="metal-binding site [ion binding]" /db_xref="CDD:29830" misc_feature complement(order(444482..444484,444500..444502, 444956..444958,445079..445099)) /locus_tag="B565_0405" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29830" gene complement(445999..446886) /locus_tag="B565_0406" /db_xref="GeneID:10486323" CDS complement(445999..446886) /locus_tag="B565_0406" /codon_start=1 /transl_table=11 /product="33 kDa chaperonin" /protein_id="YP_004391058.1" /db_xref="GI:330828106" /db_xref="GeneID:10486323" /translation="MMSNQDLLYRYLFEEYEVRGELVQLDHTYRHVVEAQNYPVQVQK LLGELLVATSLLTATLKFEGSITVQLQGDGPVRLAVINGDNNQQLRGVARYEGELPSD GKLQSLIGNGQLIITITPEQGERYQGIIALDADTLAGCLEHYFARSEQLATKLWIRTG YHEGAPRAAGIMLQELPAQSEDHSNDFDHLTQLTSTIKDEELFGLQAEEILYRLYHQD KVRVFDPQAVEFRCTCSRERCEGALLQIEKEEVMEMVQELGKIDMHCDYCGAQYQFNG IDVETLFSRAPGNDANQLH" misc_feature complement(446026..446877) /locus_tag="B565_0406" /note="Hsp33-like chaperonin; Reviewed; Region: hslO; PRK00114" /db_xref="CDD:178874" misc_feature complement(446062..446865) /locus_tag="B565_0406" /note="Heat shock protein 33 (Hsp33): Cytosolic protein that acts as a molecular chaperone under oxidative conditions. In normal (reducing) cytosolic conditions, four conserved Cys residues are coordinated by a Zn ion. Under oxidative stress (such as heat...; Region: Hsp33; cd00498" /db_xref="CDD:29605" misc_feature complement(order(446191..446193,446365..446367, 446437..446445,446455..446457,446830..446832)) /locus_tag="B565_0406" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29605" misc_feature complement(order(446356..446367,446377..446379, 446383..446385,446830..446832)) /locus_tag="B565_0406" /note="domain crossover interface; other site" /db_xref="CDD:29605" misc_feature complement(order(446083..446085,446092..446094, 446185..446187,446191..446193)) /locus_tag="B565_0406" /note="redox-dependent activation switch; other site" /db_xref="CDD:29605" gene complement(446961..447359) /locus_tag="B565_0407" /db_xref="GeneID:10486324" CDS complement(446961..447359) /locus_tag="B565_0407" /codon_start=1 /transl_table=11 /product="Heat shock protein 15" /protein_id="YP_004391059.1" /db_xref="GI:330828107" /db_xref="GeneID:10486324" /translation="MPNHAESALEVRLDKWLWAARFYKTRSIARDQIDGGKVHYNGQR SKPGKQVEVGALIRFWQGQDEREVRVLALSEQRKSAPLAQQLYEETAESLKKRAENSE ARRFNSQFAPSPERRPDKQERRQLLKVKQY" misc_feature complement(447114..447329) /locus_tag="B565_0407" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cd00165" /db_xref="CDD:29105" misc_feature complement(order(447204..447206,447210..447227, 447228..447230,447249..447251,447255..447260, 447267..447272,447276..447281,447285..447290, 447324..447326)) /locus_tag="B565_0407" /note="RNA binding surface [nucleotide binding]; other site" /db_xref="CDD:29105" gene complement(447616..448041) /locus_tag="B565_0408" /db_xref="GeneID:10486325" CDS complement(447616..448041) /locus_tag="B565_0408" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391060.1" /db_xref="GI:330828108" /db_xref="GeneID:10486325" /translation="MAAIFNVMQQPLEPSMRQFGFFLGIAIGVILILFGSIVIFQALP AALDVLEMPSSIPFVREVYTWLMTSANGLTAQLEQNFLEAFQTVLKLILLITFMWVCV KLVNMGVLIIRAGVDLIRTAIAHSEGPHDQKKPDQHDHF" gene 448182..449570 /locus_tag="B565_0409" /db_xref="GeneID:10486326" CDS 448182..449570 /locus_tag="B565_0409" /codon_start=1 /transl_table=11 /product="PAP2 superfamily protein" /protein_id="YP_004391061.1" /db_xref="GI:330828109" /db_xref="GeneID:10486326" /translation="MSRTLFLLLLALFAALPALSAEPAGPTAAACAIRHQGQLLLVQD RISSRYSLSGGYIDGGESPQQAALRELYEETGLRGEVVQELGRWQRAVIFACRTLEPI VAQQDSDFVSLLKAPNLGGEILNARLIAIDQLPREQRRFPDQLDWLQSRLDKVPESEV HWQADFVAQGNALHQAEIPLMLHLQQWLGPDVWWLSVSNLFGSGGFQLALIPLLLPLL GWPRLRQLLFAMLWLGLLVQASKEGIGWPRPFHLQPELATHSAQGFGMPSGHTASALL FWGALLGWLWPARRGLAYSLALLLALTTGLARVWLGVHFISDVAVGLLIGALLLAVRP YWRLDQRSSAWGLLIAAALVCAGLSQSAHLAGIGLAALGLWLGGRATLVRDGYSPWLT GAVVLAGMLLMVVGAWALPLLTSSSLTILLGQFVLFFGLGLWLSAGLWWILSFLKCDT RPKGNGSDKGTL" misc_feature 448278..448616 /locus_tag="B565_0409" /note="Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or...; Region: Nudix_Hydrolase; cl00447" /db_xref="CDD:189099" misc_feature order(448344..448352,448380..448406) /locus_tag="B565_0409" /note="nudix motif; other site" /db_xref="CDD:72880" misc_feature 448863..>449135 /locus_tag="B565_0409" /note="PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid...; Region: PAP2_like; cl00474" /db_xref="CDD:193835" gene 449567..450652 /locus_tag="B565_0410" /db_xref="GeneID:10486327" CDS 449567..450652 /locus_tag="B565_0410" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391062.1" /db_xref="GI:330828110" /db_xref="GeneID:10486327" /translation="MNVKKVDLAKITLGVLFLSILIISCFLVLQPFLPALVWATMITI ATWPLMLMVQRLLWGKRTLAALFMTLVLLLMFVIPLFMTLANVAEKAPMLIELGTHIS QSPPPELLWLQQIPLVGDKLYDFWQQILASGGQVLFAKLAPYFGQTARWLASQAGNLG LLFVHFLLTVGICGVLYHSGEVVATGIRRFAHRLAGQRGDNATVLASQAIRAVAMGVV VTALVQSSVAGVGLLIAGIPYAMVLVVVMFLLIVAQIGPFPVLLACIGYLYWSGDTTW GTFLLVWSLIAGTMDNFLRPFLIKRGADLPLILILVGVIGGLLTMGIIGLFIGPVVLA VGYTLLDAWIKEDDQPAAAAVEAPKAE" misc_feature 449576..450604 /locus_tag="B565_0410" /note="Domain of unknown function DUF20; Region: UPF0118; cl00465" /db_xref="CDD:186015" gene complement(450739..450942) /locus_tag="B565_0411" /db_xref="GeneID:10486328" CDS complement(450739..450942) /locus_tag="B565_0411" /codon_start=1 /transl_table=11 /product="IS3 family transposase B" /protein_id="YP_004391063.1" /db_xref="GI:330828111" /db_xref="GeneID:10486328" /translation="MTDGYDCYQNALAERVNGILKGELLLQSPQDLAQAREMVREAVD IYNAERPHHALKYRTPDAVHRGF" misc_feature complement(450763..>450927) /locus_tag="B565_0411" /note="putative transposase OrfB; Reviewed; Region: PHA02517" /db_xref="CDD:177368" gene complement(451560..451958) /locus_tag="B565_0412" /db_xref="GeneID:10486329" CDS complement(451560..451958) /locus_tag="B565_0412" /codon_start=1 /transl_table=11 /product="IS3 family transposase A" /protein_id="YP_004391064.1" /db_xref="GI:330828112" /db_xref="GeneID:10486329" /translation="MGQGVKRTQRDYSLTFKLALVEQIEKGELTYKQAQVRYGIQGRS TVLVWLRKHGRQDWSQGASVRAGRSITMPDPDNQTPEQRIKELEQQLALMSQKAQFFE AVVDVLKNDYGVSIVKKRPGKSSRSGKSRS" gene complement(452118..452639) /locus_tag="B565_0413" /db_xref="GeneID:10486330" CDS complement(452118..452639) /locus_tag="B565_0413" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391065.1" /db_xref="GI:330828113" /db_xref="GeneID:10486330" /translation="MTQFQTTLFEKSDFRKLVNDLNKANKSNMLEESVLNTVFEKFWP DLESRVKSILEENVTKDEQNISMRSERELLEEILDLSRALAIQKSGGFKANTELNKLV SDFISAFYMTFEADWEHTKSCLENSKFFISPEGNFINPCVKDEANNWSARAFLLNSYR QLISYIEKHGLGI" gene complement(453146..453391) /locus_tag="B565_0414" /db_xref="GeneID:10486331" CDS complement(453146..453391) /locus_tag="B565_0414" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391066.1" /db_xref="GI:330828114" /db_xref="GeneID:10486331" /translation="MSRPFNHASAPDSVTCLRGWQPRPPLGPVRLRIWRQGRRQWWNS LHHPPPTRLRLIYPLITRGIATPRVIYPCPFLLTTSP" gene 453410..455317 /locus_tag="B565_0415" /db_xref="GeneID:10486332" CDS 453410..455317 /locus_tag="B565_0415" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase operon regulator" /protein_id="YP_004391067.1" /db_xref="GI:330828115" /db_xref="GeneID:10486332" /translation="MTMPSDLQPLLAWPDYLQASWLRCAHQTSATLWHPPHCAKGQTL QSLRQRKRDLLTTGEMALEDLYEFMEGRPCALLLTDESGCLLAQTGHPDTLRELAALG FGPGAFFSEGRIGTNAINLAALEGVPLCVSGAQHFNQTLHPWHSCASPVYNSNGRQVA IIALICKVEEASAGDLALTVSAGRELAHLLQMETLMQESQHHLSELYALLDGMDDGVL AWDPQGRLRYLNALAANRLRLDPALCLGQPLEQHLLLPHRLQLAIRGQTPLSHVEVTL ERLGAQEGEFINALVSLKPLPGPEGVSFIALLHPVDRLRAIHQLRQTVPELSALVGES SAMHKLLRYARQAAQSQGPILLRGEEEVGKAQLAEAIHFGSERAAGPLITLNCKALPS ERMALELMGSDEAGQERAGKFELAHGGTLVLEQVECLSAPMQAALLQLLKTGRIQRFD SARILPLKVRIIATSSAPLEQLVQEGLFGRQLLYALQACELWLPGLRERAADLPGLIS QQLAAQGREPVRQFSPAALDCLLAYPWPGNLGELRSAVEHALLHAGQGPIPPEALPAA IRHGYQRVADEVVGQPLLTLAELERQAILRCAHACKGQVSQMAQHLGISRTTLWRRLK LLEIDPADYHG" misc_feature 453416..455314 /locus_tag="B565_0415" /note="DNA-binding transcriptional regulator DhaR; Provisional; Region: PRK11388" /db_xref="CDD:183114" misc_feature 454400..454849 /locus_tag="B565_0415" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 454481..454504 /locus_tag="B565_0415" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(454484..454507,454679..454681,454805..454807) /locus_tag="B565_0415" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 454667..454684 /locus_tag="B565_0415" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 454847..454849 /locus_tag="B565_0415" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 455162..455281 /locus_tag="B565_0415" /note="Bacterial regulatory protein, Fis family; Region: HTH_8; cl01091" /db_xref="CDD:186327" gene complement(455412..456494) /locus_tag="B565_0416" /db_xref="GeneID:10486333" CDS complement(455412..456494) /locus_tag="B565_0416" /codon_start=1 /transl_table=11 /product="glycerol dehydrogenase CgrD" /protein_id="YP_004391068.1" /db_xref="GI:330828116" /db_xref="GeneID:10486333" /translation="MDRIIISPSKYVQGNGALANIGNYVNALGSKPLILADAFVTKLV GDTVATSFHGAGIQPEFDCFNGECSRPEIDRLLARCNQTPFDVIIGIGGGKTLDTAKS VAFYQKVPVVIVPTIASTDAPTSALAVIYTPEGQFSEYLMIPTNPNMVIMDTGVVSRA PVRLLVSGMGDALSTYFEARANKVSGCQTMAGGASTLAAQAIAELCYKTLLADGYKAK LAVEQGICTKAVENIIEANTYLSGIGFESSGLAAAHAIHNGLTQLAECHHLYHGEKVA FGTLVQLVLENAPMAEIETVLAFCRSVGLPTNLHMMGVKELDMARLMEVAKASTAEGE TIHNMPFKVTAEDVLAAIVTAHQLGL" misc_feature complement(455421..456473) /locus_tag="B565_0416" /note="Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation; Region: GlyDH; cd08170" /db_xref="CDD:173929" misc_feature complement(455451..456473) /locus_tag="B565_0416" /note="Iron-containing alcohol dehydrogenase; Region: Fe-ADH; pfam00465" /db_xref="CDD:189559" misc_feature complement(order(455790..455792,455799..455804, 455871..455873,455880..455882,456453..456458, 456462..456470)) /locus_tag="B565_0416" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173929" misc_feature complement(order(455682..455684,455721..455723, 455733..455735,455970..455972,455982..455984, 456003..456005,456027..456029,456078..456083, 456138..456140,456144..456149,456192..456194, 456201..456203,456210..456218,456384..456386)) /locus_tag="B565_0416" /note="active site" /db_xref="CDD:173929" misc_feature complement(order(455682..455684,455733..455735, 455982..455984)) /locus_tag="B565_0416" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173929" gene complement(456620..457336) /locus_tag="B565_0417" /db_xref="GeneID:10486334" CDS complement(456620..457336) /locus_tag="B565_0417" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase, phosphotransferase subunit" /protein_id="YP_004391069.1" /db_xref="GI:330828117" /db_xref="GeneID:10486334" /translation="MIGIVVVSHSAMLAAGLKALADQLGSPARLLLAAGVDDADHPIG TNAIAVMSAIEEADDGSGVLVLMDLGSALLSAETALELLPPELSARVRLCPAPLVEGT LAAVVAAGSGLTLDEVAAEALGALGPKQAMLPASPAQAAIETAPVADDGWLRCEVVVD NPHGLHVRPAARLVAALKPFAAELKLQKGDKEANPRSLTRLAMLNVRQGDQLTLLARG EDANAALTCFQQLAAERFGD" misc_feature complement(456959..457333) /locus_tag="B565_0417" /note="PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_man; cl00025" /db_xref="CDD:193618" misc_feature complement(456644..456871) /locus_tag="B565_0417" /note="Histidine-containing phosphocarrier protein (HPr)-like proteins. HPr is a central component of the bacterial phosphoenolpyruvate sugar phosphotransferase system (PTS). The PTS catalyses the phosphorylation of sugar substrates during their translocation...; Region: PTS-HPr_like; cd00367" /db_xref="CDD:29444" misc_feature complement(456860..456871) /locus_tag="B565_0417" /note="dimerization domain swap beta strand [polypeptide binding]; other site" /db_xref="CDD:29444" misc_feature complement(order(456728..456733,456740..456751, 456803..456805,456812..456814,456824..456829, 456833..456838,456842..456844)) /locus_tag="B565_0417" /note="regulatory protein interface [polypeptide binding]; other site" /db_xref="CDD:29444" misc_feature complement(456839..456841) /locus_tag="B565_0417" /note="active site" /db_xref="CDD:29444" misc_feature complement(456746..456748) /locus_tag="B565_0417" /note="regulatory phosphorylation site [posttranslational modification]; other site" /db_xref="CDD:29444" gene complement(457338..457967) /locus_tag="B565_0418" /db_xref="GeneID:10486335" CDS complement(457338..457967) /locus_tag="B565_0418" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase, ADP-binding subunit" /protein_id="YP_004391070.1" /db_xref="GI:330828118" /db_xref="GeneID:10486335" /translation="MLSKHHIVNWLLDCEHIFTEQRDYLTALDTDIGDGDHGLNMQRG FAKVAEKLPAVADKDIGQVLKTTGMTLLSSVGGASGPLYGTFFIRAAASTDACQSLSL SQLCKMLSDGVEGIVSRGRAEPGDKTMCDAWWPALAALQQAQQQELPLNEALDKAVAA AAAGTEATIQMQARKGRASYLGERSIGHQDAGATSTLLLLTALRDRARL" misc_feature complement(457392..457967) /locus_tag="B565_0418" /note="DAK2 domain; Region: Dak2; cl03685" /db_xref="CDD:194673" gene complement(457977..459047) /locus_tag="B565_0419" /db_xref="GeneID:10486336" CDS complement(457977..459047) /locus_tag="B565_0419" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase, kinase subunit" /protein_id="YP_004391071.1" /db_xref="GI:330828119" /db_xref="GeneID:10486336" /translation="MKKLINAVDAVVREQLMGMAAAHPELKVRIEPHYITRADSPVMG KVALVSGGGSGHEPMHGGLVGKGMLDGACPGEIFTSPTPDQMYECGQAVDGGAGVLFL VKNYTGDVLNFETAVELLHGDGVKVGFALIDDDVAVKDSLYTAGRRGVATTVLCEKLV GAAAEAGYDLARCEALARRINNQSRTIGVAMHACTVPAAGKPSFTLADNELEFGVGIH GEPGIERRPFTDLNTLVDDMFSELADNTPYGRTLRHWDRTSGSWQEEHTFIEPLNKGD RVIALVNSLGGTPISELYGVYGRLATLCEEAGIHLVRNLIGPYCTSLDMTGISITLLK VDDELMTLWDAPVHTPALRRGC" misc_feature complement(457980..459047) /locus_tag="B565_0419" /note="dihydroxyacetone kinase subunit DhaK; Provisional; Region: PRK14481; cl10557" /db_xref="CDD:187009" misc_feature complement(457983..459002) /locus_tag="B565_0419" /note="Dak1 domain; Region: Dak1; pfam02733" /db_xref="CDD:111609" gene complement(459286..460644) /locus_tag="B565_0420" /db_xref="GeneID:10486337" CDS complement(459286..460644) /locus_tag="B565_0420" /codon_start=1 /transl_table=11 /product="xanthine/uracil permease and YjcD" /protein_id="YP_004391072.1" /db_xref="GI:330828120" /db_xref="GeneID:10486337" /translation="MAKQDMAAQTGTGGFLDSYFSISARGSSVRQELVAGLTTFLAMV YSIIVVPNMLGAAGFEQGPVFVATCLIAAFGSLLMGLWAKLPMAIGCAISLTAFTAFS LVLGQGLSIPVALGAIFLMGVLFTLISVTGVRQWILDNLPSGIAHGTGIGIGLFLLLI ATNGVGMVIKNEGAGLPVQLGEVTAFPVIMTVLGLAAIFGLERRKVPGGILMVIIAIS ILGLIFDPKVTWQGFFAMPSLTGEKGSLVGSMDLLGALNPVVIPTVLALVMTAVFDAT GTIRAVAGQAGLINERGHIISGGKALTADSVSSMVAGAVGGAPAAVYIESAAGTAAGG KTGLTAALVGVLFLLMIFLSPLSYLVPAYATAPALMYVGLLMLGNVTKLDFSDSVDAL SGMLCAVFIVLTCNIVTGIMLGFVALVVGRIFAAEWKKLNVGTVIIALALVVFYAGGW AI" misc_feature complement(459295..460608) /locus_tag="B565_0420" /note="Sulfate transporter family; Region: Sulfate_transp; cl00967" /db_xref="CDD:193990" misc_feature complement(459406..460557) /locus_tag="B565_0420" /note="Permease family; Region: Xan_ur_permease; pfam00860" /db_xref="CDD:189745" gene complement(460949..461161) /locus_tag="B565_0421" /db_xref="GeneID:10486338" CDS complement(460949..461161) /locus_tag="B565_0421" /codon_start=1 /transl_table=11 /product="Cold shock-like protein cspI" /protein_id="YP_004391073.1" /db_xref="GI:330828121" /db_xref="GeneID:10486338" /translation="MSNKMTGTVKFFNAEKGFGFISPADGSKDVFVHFSAIQSTSFKT LDEGQRVEFTIEQGQKGPAAANVVGL" misc_feature complement(460961..461149) /locus_tag="B565_0421" /note="Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein...; Region: CSP_CDS; cd04458" /db_xref="CDD:88424" misc_feature complement(order(460982..460984,461069..461071, 461102..461104,461129..461131)) /locus_tag="B565_0421" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:88424" misc_feature complement(order(461063..461074,461093..461113)) /locus_tag="B565_0421" /note="RNA-binding motif; other site" /db_xref="CDD:88424" gene complement(461756..462040) /locus_tag="B565_0422" /db_xref="GeneID:10486339" CDS complement(461756..462040) /locus_tag="B565_0422" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391074.1" /db_xref="GI:330828122" /db_xref="GeneID:10486339" /translation="MKKLEMKDLTEAEKAEIALLLQKAQANADHQLTNGERNKIREEG RLKIVADRAEAAKAASKLAREKAKERAKNQVLPETFSWIDSVSNKFRSKR" misc_feature complement(461759..462040) /locus_tag="B565_0422" /note="YjbD family (DUF3811); Region: DUF3811; cl08125" /db_xref="CDD:174956" gene complement(462187..463089) /locus_tag="B565_0423" /db_xref="GeneID:10486340" CDS complement(462187..463089) /locus_tag="B565_0423" /codon_start=1 /transl_table=11 /product="Cation efflux family protein" /protein_id="YP_004391075.1" /db_xref="GI:330828123" /db_xref="GeneID:10486340" /translation="MNRKTRAAMVSVCSNISLIIMKMVAGFASGSVSIISEAIHSAMD LVAALIALFAVKKSDLPPDERHPYGHDKIENVSGVIEALLILLAAGWIIFEAVDKLLT PSPIESIGWGVLVMVISALVNSGVSAYLYKVAREEESVALAADALHLKADVLTSAGVA VGLGGIWLAGLFGHSLAILDPLVAIAVAIFIVREAISMLNEAFQPLIDQSMSPEELAM TSRIITECCPAASGFHDLRSRRAGRRRHIDFHLTLPPEMSIGEAHDICDRIEHAIMAQ LPHAIVLIHVEPEEQEMPSPLAIN" misc_feature complement(462214..463089) /locus_tag="B565_0423" /note="Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]; Region: MMT1; COG0053" /db_xref="CDD:30402" misc_feature complement(462223..463038) /locus_tag="B565_0423" /note="Cation efflux family; Region: Cation_efflux; cl00316" /db_xref="CDD:193765" gene complement(463748..464503) /locus_tag="B565_0424" /db_xref="GeneID:10486341" CDS complement(463748..464503) /locus_tag="B565_0424" /codon_start=1 /transl_table=11 /product="polar amino acid ABC transporter" /protein_id="YP_004391076.1" /db_xref="GI:330828124" /db_xref="GeneID:10486341" /translation="MKSAMKLLTPLLLLLTSILSGQLQAKPLKVGVSFAIPPYVIEGE NRGIELDLLKEAFTGSGYEPSFEFLPLERTFRLFESGKLDAIINVRPGMVDPHVLTQP VITFHNRIFTLRSTHISTLDDLHSKRVTAFQRARIILGGAFATMANQNPHYEEVAKQQ VQVHQLMRGRVDAVVLEERVFYYYLDQLIATAQAGEHYERNQVRQADLFPPTVYHFAF RTADARNLFDKRLEAMRQDGRYHQIFAAYGATP" misc_feature complement(463760..464422) /locus_tag="B565_0424" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature complement(463760..464422) /locus_tag="B565_0424" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature complement(order(463973..463975,464081..464083, 464225..464227,464291..464293,464396..464398)) /locus_tag="B565_0424" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature complement(order(463994..463996,464012..464014, 464018..464020)) /locus_tag="B565_0424" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature complement(463853..463870) /locus_tag="B565_0424" /note="hinge residues; other site" /db_xref="CDD:29040" gene complement(464628..465215) /locus_tag="B565_0425" /db_xref="GeneID:10486342" CDS complement(464628..465215) /locus_tag="B565_0425" /codon_start=1 /transl_table=11 /product="Single-stranded DNA-binding protein" /protein_id="YP_004391077.1" /db_xref="GI:330828125" /db_xref="GeneID:10486342" /translation="MASRGINKVILIGNLGQDPEVRYMPSGGAVTNITLATSETWRDK QTGEQKERTEWHRVVFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQSGQERYTTEV LVDSFTGVMQMLGGRPQGGQGMGQNMGGQSQGNWGQPQQSMPAQQPMNQQRPAPAPQQ NMQPQGGYGRPAQQPQSAPPVYNEPPMDFDDDIPF" misc_feature complement(464895..465191) /locus_tag="B565_0425" /note="SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date...; Region: SSB_OBF; cd04496" /db_xref="CDD:72968" misc_feature complement(order(464916..464918,464925..464927, 464958..464960,464985..464987,465048..465050, 465054..465056,465099..465107,465180..465191)) /locus_tag="B565_0425" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:72968" misc_feature complement(order(464907..464909,464913..464915, 464952..464957,464961..464963,464967..464969, 464991..464996,465033..465035,465039..465041, 465045..465047,465051..465053,465057..465062, 465096..465101,465120..465122,465150..465152, 465168..465176)) /locus_tag="B565_0425" /note="ssDNA binding site [nucleotide binding]; other site" /db_xref="CDD:72968" misc_feature complement(order(464973..464975,464979..464981, 464985..464987)) /locus_tag="B565_0425" /note="tetramer (dimer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:72968" misc_feature complement(464631..>464720) /locus_tag="B565_0425" /note="Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold; Region: RPA_2b-aaRSs_OBF_like; cl09930" /db_xref="CDD:195928" gene 465642..466289 /locus_tag="B565_0426" /db_xref="GeneID:10486343" CDS 465642..466289 /locus_tag="B565_0426" /codon_start=1 /transl_table=11 /product="putative csgAB operon transcriptional regulatory protein" /protein_id="YP_004391078.1" /db_xref="GI:330828126" /db_xref="GeneID:10486343" /translation="MKAACPIALVTENNVQASTFAAYLISHLSRPVQLIHEINQLDNQ CDGTLFLIDLDYIRSGQSLGWNRAISERFGMATTVLLNAPTATDRDLLLMWPQICGLF FRQDPLDRLVAGLQKILLGEYWMPRHLLCELVEYYRQGNSYLQRNDTLLTAREQEIIR YLMTGASNVEIADSLFVSEHTVKSHLYNVFKKLNVKNRIQAVSWAKEYLDAPDSH" misc_feature 465666..466268 /locus_tag="B565_0426" /note="DNA-binding transcriptional regulator CsgD; Provisional; Region: PRK10100" /db_xref="CDD:182241" misc_feature 466092..466262 /locus_tag="B565_0426" /note="C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors...; Region: LuxR_C_like; cd06170" /db_xref="CDD:99777" misc_feature order(466095..466103,466140..466148,466170..466175, 466179..466184,466188..466202,466233..466235) /locus_tag="B565_0426" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:99777" misc_feature order(466128..466130,466134..466136,466140..466142, 466233..466241,466248..466250,466257..466262) /locus_tag="B565_0426" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:99777" gene 466346..466732 /locus_tag="B565_0427" /db_xref="GeneID:10486344" CDS 466346..466732 /locus_tag="B565_0427" /codon_start=1 /transl_table=11 /product="CsgE-like protein" /protein_id="YP_004391079.1" /db_xref="GI:330828127" /db_xref="GeneID:10486344" /translation="MAAEADTPLESVQPEQESDRLDVDGLVLDRTFTRFGQGFYNEFT RLRSDEDPDARENLTIHERPTARWGSLIWITHNRKVIFKTALSPGRNQQEQSAKLAWS QVRQTLEQQKIATLFMDTFDLEHDEL" misc_feature 466436..466729 /locus_tag="B565_0427" /note="Curli assembly protein CsgE; Region: CsgE; cl08115" /db_xref="CDD:186776" gene 466744..467145 /locus_tag="B565_0428" /db_xref="GeneID:10486345" CDS 466744..467145 /locus_tag="B565_0428" /codon_start=1 /transl_table=11 /product="Curli production assembly/transport component CsgF" /protein_id="YP_004391080.1" /db_xref="GI:330828128" /db_xref="GeneID:10486345" /translation="MRARLWLVAALIAPTLHASELVYRPINPSFGGNPLNSSHLLGTA NAQNDYKDPASGSGSSGTSALDRLTSNLQSRLISQLLADIGKDGSQSGSLVTDDFAIN VVDEDGTLVVSITDRVTNQTTMIEVNGLIAD" misc_feature 466762..467136 /locus_tag="B565_0428" /note="Curli production assembly/transport component CsgF; Region: Tafi-CsgF; cl08082" /db_xref="CDD:186759" gene 467153..467992 /locus_tag="B565_0429" /db_xref="GeneID:10486346" CDS 467153..467992 /locus_tag="B565_0429" /codon_start=1 /transl_table=11 /product="Curli production assembly/transport component CsgG" /protein_id="YP_004391081.1" /db_xref="GI:330828129" /db_xref="GeneID:10486346" /translation="MKRQLLLIVPLLALAGCATHIGSPVADEKATLMPRSVSYKELIS LPKPKGKIVAAVYDFRDQTGQYLPAPASNFSTAVTQGGVAMLSTALWDSQWFVPLERE GLQNLLTERKIVRAAQNKPNVPGNNANQLPSLVAANILIEGGIVAYDSNVRTGGAGAK YFGIGASGEYRVDQVTVNLRAVDIRSGRILNSVTTSKTVLSQQVQAGVFRFVEYKRLL EAEAGFSTNEPVQMCVMSAIESGVIRLIANGVRDNLWQLADQRDIDNPILQEYLQDNA PLL" misc_feature 467195..467983 /locus_tag="B565_0429" /note="Curli production assembly/transport component CsgG; Region: CsgG; cl00639" /db_xref="CDD:193894" gene 468180..468701 /locus_tag="B565_0430" /db_xref="GeneID:10486347" CDS 468180..468701 /locus_tag="B565_0430" /codon_start=1 /transl_table=11 /product="Curlin associated repeat-containing protein" /protein_id="YP_004391082.1" /db_xref="GI:330828130" /db_xref="GeneID:10486347" /translation="MKHLLSALFFLLISGAPQLAAEPAVFDELAMASELDSGLQTDGN QALLWQLGSEQQLRLTQQGELNQARLLQQGWANELALSQVGDENWVNGAQLGEGNSAE LYQAGINNRIWLLQQGSGNEAWISQQGANNQARAIQLGDGNQASIEQNGYGLAATVIQ TGANQQVNVVQTN" misc_feature <468372..468692 /locus_tag="B565_0430" /note="curlin minor subunit CsgB; Provisional; Region: csgB; PRK10101" /db_xref="CDD:182242" gene 468736..470325 /locus_tag="B565_0431" /db_xref="GeneID:10486348" CDS 468736..470325 /locus_tag="B565_0431" /codon_start=1 /transl_table=11 /product="Curlin associated protein" /protein_id="YP_004391083.1" /db_xref="GI:330828131" /db_xref="GeneID:10486348" /translation="MFKRTIIASAVLLATSTAWAASTGNQAEVTQAQFSSGNLAYIQQ VEESTANKAAIYQQGNDNLASTEQRNTGASTADIKQAGGQNEGEVLQQGVTNKSTATI DTNGQLNKASITQQYYNGEATARVSQLGDSNNALIKQDDGNGAISVIEQQADGNSAQI NNYWSDYASATITQSGEGGHIADVDQRESDGAVASVAQEGGNNTALVAQRTSNFGYGA NEGTSAVVKQSGNDNTAEVTQLGLANVATVEQSGTAGSVTAQQSGATAGQGNNLLAKQ AGSGETALLTQTGSRNQIDSEQRGSEDLLTITQNGNENIANARQSGTGETAVVTQLGN GNQADTNQQGSGNTAQVTQNGSNNQAVVDQLATSVGGSVTIDQLGSDNYANAVQEEGS RNKVDIDQNGTGNQVAAARGVEGKGAWTWGSDNKLVVAQKGTDNWAYADASHSDSVVK VTQDGELNNAKVESYLGSDNTLTVSQFGEKHVANVYVNGGMGGGNNEVDVAQTDSLNT ANVTVYGSDNMAYVYQGSGSN" misc_feature <469294..469662 /locus_tag="B565_0431" /note="curlin minor subunit CsgB; Provisional; Region: csgB; PRK10101" /db_xref="CDD:182242" misc_feature <469576..469836 /locus_tag="B565_0431" /note="curlin minor subunit CsgB; Provisional; Region: csgB; PRK10101" /db_xref="CDD:182242" misc_feature <469693..470094 /locus_tag="B565_0431" /note="curlin minor subunit CsgB; Provisional; Region: csgB; PRK10101" /db_xref="CDD:182242" gene 470367..470750 /locus_tag="B565_0432" /db_xref="GeneID:10486349" CDS 470367..470750 /locus_tag="B565_0432" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391084.1" /db_xref="GI:330828132" /db_xref="GeneID:10486349" /translation="MVLLCGLMLVYRVPSPATARETEIEPDPSIRLSLNMVQSEQGLS LAPTLLSKRNLTVSFRLLVYGEGAAGSTTQRQSRNLSLQAGVVMAVGKIGLGLRCPYR VEVTARIWQNERLLVEKKEQMACAG" gene 470840..473668 /locus_tag="B565_0433" /db_xref="GeneID:10486350" CDS 470840..473668 /locus_tag="B565_0433" /codon_start=1 /transl_table=11 /product="Excinuclease ABC subunit A" /protein_id="YP_004391085.1" /db_xref="GI:330828133" /db_xref="GeneID:10486350" /translation="MEKIVVRGARTHNLKNINLTLPRDKLIVVTGLSGSGKSSLAFDT LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTIT EIYDYLRLLFARVGEPRCPTHAIPLAAQTISQMVDQVLAQPEGSKLMLLAPVVRDRKG EHTKLLENLAAQGYIRARIDGEVCDLSDPPTLELHKKHTIEVVVDRFKVREDLALRLA ESFETALTLSGGIVLVVPMDGEEGVTPMTFSANFACPECGYSMSELEPRIFSFNNPAG ACPTCDGLGVQQYFDPAKVIGDPAISLANGAIRGWDKRSFYYFQMLKSLSEHYKFDLE TPWEDLPVKTQEVILRGSGRTEIEFRYMNDRGDVVVRKHPFEGILHNMERRYRETESN SVREELSKYIANKSCTSCGGSRLREEARHVFVDNRNLPAIAEQSIGDALAFFEGLNLT GQRAQIAEKILKEIVERLGFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVG VMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVIVVEHDEDAIRLADHVLDIGPGAG VHGGEIVAQGTPQQIIDNPESLTGDYLSGRKQIAIPAERTPLTGKWLKLKGASGNNLR NVNLDLPIGVMTCVTGVSGSGKSTLINDTLFRITHRELNKATESTPAPYRSVEGLEHL DKVVDIDQSPIGRTPRSNPATYTGLFTPIRELLSGTQEARSRGYQPGRFSFNVKGGRC EACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVKYKGKNIHEILEMTVEDARE FFDPVPAVARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLARELSKRDTGQTLYIL DEPTTGLHFHDIQQLLKVLHQLRDRGNTIVIIEHNLDVVKTADWIVDLGPEGGAGGGR ILVTGTPEEICTNKESHTARFLRPLLAR" misc_feature 470840..473665 /locus_tag="B565_0433" /note="excinuclease ABC subunit A; Reviewed; Region: uvrA; PRK00349" /db_xref="CDD:178984" misc_feature 470849..>471187 /locus_tag="B565_0433" /note="The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep...; Region: ABC_UvrA_I; cd03270" /db_xref="CDD:73029" misc_feature <472229..472567 /locus_tag="B565_0433" /note="The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep...; Region: ABC_UvrA_I; cd03270" /db_xref="CDD:73029" misc_feature 472676..473602 /locus_tag="B565_0433" /note="The excision repair protein UvrA domain II; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep...; Region: ABC_UvrA_II; cd03271" /db_xref="CDD:73030" gene 473790..475463 /locus_tag="B565_0434" /db_xref="GeneID:10486351" CDS 473790..475463 /locus_tag="B565_0434" /codon_start=1 /transl_table=11 /product="GGDEF domain-containing protein" /protein_id="YP_004391086.1" /db_xref="GI:330828134" /db_xref="GeneID:10486351" /translation="MAQAPRTIDHQLAYSMFPIWLGAILLLLVLLAWAQIPAASRIEE QRMKEHLLRVTKAVQADVAALDAFSRDWGIWDDSHRFVDNKSRGYIESNLFSDMPMRD FSLNLMSFMDLTGYEIWTRTLLPDAPGINPDQFPYFLDELKKQLRERSVAQGGINLHG IRASQWGPLMYSWQPIRNSDESAPFNGFLLVVRWLDKAYLEQVSERTALPLAISHANL DVTATFKPLKPQITYRLIDLGLTRLRGEVRLLNSDNQPVLTLVIEEERKIFSGVMEGA LWTFIGMLFISFICVMIAMYRLNSIVLTPLQQLVSALQRFGDRPDATLIPYIDSSAEM ATLSGKFKEMASKVSQQHDDLLEKSSQMEMAAFTDPLTRCFNRRYLDGWLQANRAKPC LLLLLDLDHFKRINDRLGHDIGDLVLKQLADLLRKVVTGEREPIIRLGGEEFLLLLQV DDEQELALRVEYLRQRVAQHRFGREDAPLWLTVSLGFCRYPLHPEYQDSFWSHSFKLA DMALYQAKVGGRNRWCGYAGPLSAEGMGQTPEQLAEGGNITLLHSVNPD" misc_feature 473952..474431 /locus_tag="B565_0434" /note="CHASE4 domain; Region: CHASE4; cl01308" /db_xref="CDD:154325" misc_feature 474627..474839 /locus_tag="B565_0434" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 474888..475361 /locus_tag="B565_0434" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(474981..474983,475113..475115) /locus_tag="B565_0434" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(474996..474998,475005..475010,475020..475022, 475032..475034,475101..475103,475107..475118) /locus_tag="B565_0434" /note="active site" /db_xref="CDD:143635" misc_feature order(475089..475091,475173..475175) /locus_tag="B565_0434" /note="I-site; other site" /db_xref="CDD:143635" gene 475921..476535 /locus_tag="B565_0435" /db_xref="GeneID:10486352" CDS 475921..476535 /locus_tag="B565_0435" /codon_start=1 /transl_table=11 /product="outer membrane protein W" /protein_id="YP_004391087.1" /db_xref="GI:330828135" /db_xref="GeneID:10486352" /translation="MKKLLPLMIAAAVTSPFAMAHQAGDILVRGGLAIVSPQESSDNV LGTGEFEINSNQQLGLTLGYMITDNWGVELLAATPFSHRVSTRDLGEIAKVKHLPPTL MAQYYFGDAQSKVRPYVGVGVNYTTFFDEKGVGALDGANISLDDSWGLAGQVGIDMAV TDRWFVNGSAWIMDIDTDVKVDGVGTFKTHIDPMAFMVGVGYRF" misc_feature 475921..476532 /locus_tag="B565_0435" /note="Surface antigen; Region: Surface_Ag_2; cl01155" /db_xref="CDD:194055" gene 476758..478737 /locus_tag="B565_0436" /db_xref="GeneID:10486353" CDS 476758..478737 /locus_tag="B565_0436" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004391088.1" /db_xref="GI:330828136" /db_xref="GeneID:10486353" /translation="MGLSIVQRIIAGFVLMLLLLILLGVISTFKIKGINDGLSAVSDR ATPLVVAVAGLKGALQDSNRWVLVYRTSEDAAQLPQLANQFKEQQNRFAQLSQEMGKF TDVADARARFQQVESATTQFYGLADQVLAQHRQWVSALEQRHKLEMEFIRLEDTYQWA ADLLLQQTASKRSMRNKAELITSGIARDLKNIRRADAKTDLNELEKVLSKDIEMARKR LERVLVPDDVKARFVSNLDRMQELALGAQGLLATMRQAQQLALSLATQNQQLDASLVN SLNLLDEMGKSAGAIASDSRINADAAVSSASFWILVVAAMSAAAALVIGYTTARSIQR PLQMINKELDYMAAGDMTRRINYRSSCEFGSLSRSIDTLAGKTGELLSQINAGSRHLV DEASRAAEISERAMSRVQEQKSQTDQVAAAITELEVSATEVARSTDGTKREVDLADEE ARNGRQKVATTRRITEQLAGAMEEAVGITYKLGEFSNNIGSILDVIRSIAEQTNLLAL NAAIEAARAGDAGRGFAVVADEVRALANRTQTSTEEIQGMIENLQSSSKHVVEVMGRS QEQTQSCVDQTREMDVALQSIAERMGAIKSMADQVAHAAQEQISVSQGVARHIAGIAD VAYETEREARESASSSEVLADLVAKQQQLIAHFKV" misc_feature 476764..>477150 /locus_tag="B565_0436" /note="Four helix bundle sensory module for signal transduction; Region: 4HB_MCP_2; pfam12729" /db_xref="CDD:193205" misc_feature 477685..477879 /locus_tag="B565_0436" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 477982..478731 /locus_tag="B565_0436" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 478150..478734 /locus_tag="B565_0436" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 478746..480215 /locus_tag="B565_0437" /db_xref="GeneID:10486354" CDS 478746..480215 /locus_tag="B565_0437" /codon_start=1 /transl_table=11 /product="sugar ABC transporter periplasmic protein" /protein_id="YP_004391089.1" /db_xref="GI:330828137" /db_xref="GeneID:10486354" /translation="MSKKWIGALSLLLCGQLMASELVIESWRTDDKALWEQKIIPAFE AAHPGIKVSFHPVQNVNYMPTLWESLKGGKAGDLITCRPFDDSLALFKAGHLAELTEM AGMENFPSFAQSPWQTDSGAQTFCVPMASVIHGFFYNKKIFSELGITLPQTRDQFFAV LDKIKADGRYVPLAMSGSESWVASELGFQNIGPNYWKGEDGRLALIGGQERLDNPQYV KVFDELARWRSYLGEGGESRDYATSNELFTSGKAAFYVAGSWEIAPFTGKVDFGVMRP PVAKQGDGCFFTDHTDIGMGMNPASKNKVGAMAFLQWLTTPQFAELYTNSLPGFFSLS NHFFDVTNPAAKEMMEWRDQCDSTIRVATQILSRGTPKLGDELAEVSQAVLLGKMEPK AAADRLESGLKGWYAPHQGNKAKSVDCQCDAVAPAPAPASASAPATEVSAAPATSETP AVVAPVEPASAAAAPLPAPSDEVEQALSNELEAPQLPQQ" misc_feature 478761..479972 /locus_tag="B565_0437" /note="ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]; Region: UgpB; COG1653" /db_xref="CDD:31839" misc_feature 478839..479723 /locus_tag="B565_0437" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(480288..481088) /locus_tag="B565_0438" /db_xref="GeneID:10486355" CDS complement(480288..481088) /locus_tag="B565_0438" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_004391090.1" /db_xref="GI:330828138" /db_xref="GeneID:10486355" /translation="MDTHPGFATDLLFDRYQGEVVQHDQFWAVRTPDAPDYYFGNYLL LPNPPSDRDKGWLEATFDQLIGQDPRVRHRTFQWPLAAGQNSRIAGFVATGYQYMECV VLALDEQSCPPPHDDMNKVEARTFTTADWPEWLDFELHERDEGHSEQSYLPYLRSRQA LYQAMIADGLGDWWGIWKEGQLVASCGLFFCGTLGRFQLVRTHHAWRNQGLCRQLLSQ VARAGLSRAKQLIIVADEHYHAQRIYRSLGFAPVARIGSLCRWPHEAQ" misc_feature complement(480333..>480569) /locus_tag="B565_0438" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(481187..481429) /locus_tag="B565_0440" /db_xref="GeneID:10486356" CDS complement(481187..481429) /locus_tag="B565_0440" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391091.1" /db_xref="GI:330828139" /db_xref="GeneID:10486356" /translation="MKTHLLFSLSCNPSAYVKTDVWTSKRLYIYEQNDTKSTGIYLTS DLTNFIFTKLTVRNRKVPIPKLPQSSYDGGRSSWTF" gene 481418..482308 /locus_tag="B565_0439" /db_xref="GeneID:10486358" CDS 481418..482308 /locus_tag="B565_0439" /codon_start=1 /transl_table=11 /product="methylenetetrahydrofolate reductase" /protein_id="YP_004391092.1" /db_xref="GI:330828140" /db_xref="GeneID:10486358" /translation="MGFHSARQVEALNQSLADLNGDISVSFEFFPPNSEGMENTLWQS IERLKVLEPKFVSVTYGANSGTRDRTHKVIKDIKERTGLIAAPHLTCIDASRDELRTI ARDYWNSGIRHIVALRGDLPQGLEKPDMYATDLVALLKSEADFDISVAAYPEGHPEAK SAQSDLLNLKRKIDAGANRAITQFFFDVETYLRFRDRCAAIGIDAEIVPGILPVSNYQ TLAKFAGFTNVKIPRWMHQRFEGLDNDQMTRNLVGASIAIDQVRVLSQEGVKDFHFYT LNRSELTYAICHTLGVRPKG" misc_feature 481451..482290 /locus_tag="B565_0439" /note="Methylenetetrahydrofolate reductase; Region: MTHFR; pfam02219" /db_xref="CDD:145399" misc_feature 481490..482287 /locus_tag="B565_0439" /note="Methylenetetrahydrofolate reductase (MTHFR). 5,10-Methylenetetrahydrofolate is reduced to 5-methyltetrahydrofolate by methylenetetrahydrofolate reductase, a cytoplasmic, NAD(P)-dependent enzyme. 5-methyltetrahydrofolate is utilized by methionine...; Region: MTHFR; cd00537" /db_xref="CDD:29637" misc_feature order(481595..481597,481679..481681,481766..481774, 481808..481813,481865..481867,481871..481873, 481883..481885,481889..481891,481910..481912, 481919..481921,481928..481933,481958..481960, 481964..481966,482240..482242) /locus_tag="B565_0439" /note="FAD binding site [chemical binding]; other site" /db_xref="CDD:29637" gene complement(482378..483442) /locus_tag="B565_0441" /db_xref="GeneID:10486357" CDS complement(482378..483442) /locus_tag="B565_0441" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391093.1" /db_xref="GI:330828141" /db_xref="GeneID:10486357" /translation="MKNQAVLLLLAILGATSVQAADTDRELARQLALQQKNLLPLLSN QQYQSPLPNLLQKASPRLKRQASDANQAAISRQGLDGEVKQLMQLRLANTDQATALQQ GVEPLVAYVPSGDEKSWSAIEAFDSAGNPVYLDADKAPARPVLVVEADPVKAKNAGLK VMRKALADADLQSAPRVAASTAPLKTSILKKIRLKDDQEPWLLGAAEVYAVVAGVNPS RDEPVVDIVDMPYLDYDNTDYTPNQILVYWDRYRWGAVDVVMMEQDDNVNYKELSALL IEALKLGFTAGGVPEALPFLDLGGRIVKALPDSWMTNNDDYLDTFYTLEQDQVYRQYP GAAGNAVIDLEPKEIAPTRP" misc_feature complement(482387..483304) /locus_tag="B565_0441" /note="Protein of unknown function (DUF3103); Region: DUF3103; pfam11301" /db_xref="CDD:151742" gene complement(483565..484740) /locus_tag="B565_0442" /db_xref="GeneID:10486359" CDS complement(483565..484740) /locus_tag="B565_0442" /codon_start=1 /transl_table=11 /product="Benzoate transporter" /protein_id="YP_004391094.1" /db_xref="GI:330828142" /db_xref="GeneID:10486359" /translation="MPFAIPHLIAGFIAVMVGYTSSVILIIQAATAAGADTAQVASWL WTLGIGMGVSCIGLSLYYRMPVLTAWSTPGAALLIATLGNFTLAEAIGAFVISSLLIT LCGISGWFDRLMKHIPAPLAAAMLAGVLLRFGLDLFKVAPQDPLLLGTLLLAFLLGRH LWPRYTMVLVLGVGMLICSVREDLQMGTLHWQLASPVWTWPAFSLDALFGIALPLFIV TMTSQNMPGIAILRAHGYQPATSSLISWTGLTGLLLAPFGGYAFNLAAITAAICMGKE VDPDTKRRWPAAVWAGCFYFVTGCFGATVAALFSAFPAALVTCVAGLALLGTIGSSLH SALQEDEAREAALLTFIITASGISLLGIAAACWGLLIGLAIYQFQSYRQRNQLNLKP" misc_feature complement(483613..484740) /locus_tag="B565_0442" /note="Sulfate transporter family; Region: Sulfate_transp; cl00967" /db_xref="CDD:193990" misc_feature complement(483589..484725) /locus_tag="B565_0442" /note="Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]; Region: BenE; COG3135" /db_xref="CDD:32949" gene 484860..485429 /locus_tag="B565_0443" /db_xref="GeneID:10486360" CDS 484860..485429 /locus_tag="B565_0443" /codon_start=1 /transl_table=11 /product="DNA-binding protein" /protein_id="YP_004391095.1" /db_xref="GI:330828143" /db_xref="GeneID:10486360" /translation="MQEMSQHLAARLKGLRSERGWSLDATARETSVSKAMLGQIERGE SSPTVATLWKIATGFRVSFSSFIEPIPAAQAEVLYRTADAIRQQPAGEGMQVAPLFPY ENRFGFELLELTLLPGYQRESEPHEPGVTEHVIVISGMMEVLVEGEWRSFEQGEAVRF AADRPHGYRNLGIAPAIFHNLIHYPVATP" misc_feature 484860..485369 /locus_tag="B565_0443" /note="DNA-binding transcriptional repressor PuuR; Provisional; Region: PRK09943" /db_xref="CDD:182158" misc_feature 484884..485057 /locus_tag="B565_0443" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cd00093" /db_xref="CDD:28977" misc_feature order(484896..484898,484908..484910,484983..484985) /locus_tag="B565_0443" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28977" misc_feature order(484905..484907,484980..484982) /locus_tag="B565_0443" /note="salt bridge; other site" /db_xref="CDD:28977" misc_feature order(484926..484931,484962..484964,484971..484973, 484983..484988) /locus_tag="B565_0443" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28977" misc_feature 485199..485393 /locus_tag="B565_0443" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene complement(485446..486642) /locus_tag="B565_0444" /db_xref="GeneID:10486361" CDS complement(485446..486642) /locus_tag="B565_0444" /codon_start=1 /transl_table=11 /product="Heme/copper membrane protein" /protein_id="YP_004391096.1" /db_xref="GI:330828144" /db_xref="GeneID:10486361" /translation="MHQILDSHKEEQIVSLFRLGFRPFFLFGALFAAVAMLLWLGQLN GWLTLPGIANPIWWHGHEMLFGFGAAIVAGFLLTAVQNWTAHPGVRSWPLAMVVGVWM LPRTLLPWLGEENTILMLADLLWLPLCAWFLAKPILITRQWRNLFFVPLLLILTLLNG ASWLWQADWTTVEHLLITTVLLFTTLIAVMGGRVIPFFTARATGQEKAAPRLWLERTA LATQWLILLCWLLLPTQWVTSIYIVPLYIVAASLHLWRQLRWHLPSTLAHPLLWSLHL AYLFIPLGLLALAAHSAGQPITLSMASHLLSAGCMGTMILGMIARVSLGHSGRALQVG RRITGAFALVIAAATMRVAIPLFWPAYTLHGWNLSALAWIAAYGLFVWVYTPILIRPR ADGRPG" misc_feature complement(485464..486528) /locus_tag="B565_0444" /note="NnrS protein; Region: NnrS; cl01258" /db_xref="CDD:194085" gene 487145..488694 /locus_tag="B565_r007" /db_xref="GeneID:10486362" rRNA 487145..488694 /locus_tag="B565_r007" /product="16S ribosomal RNA" /db_xref="GeneID:10486362" gene 488761..488837 /locus_tag="B565_t014" /db_xref="GeneID:10489961" tRNA 488761..488837 /locus_tag="B565_t014" /product="tRNA-Ile" /db_xref="GeneID:10489961" gene 488854..488929 /locus_tag="B565_t015" /db_xref="GeneID:10489999" tRNA 488854..488929 /locus_tag="B565_t015" /product="tRNA-Ala" /db_xref="GeneID:10489999" gene 489344..492059 /locus_tag="B565_r008" /db_xref="GeneID:10490000" rRNA 489344..492059 /locus_tag="B565_r008" /product="23S ribosomal RNA" /db_xref="GeneID:10490000" gene 492171..492293 /locus_tag="B565_r009" /db_xref="GeneID:10489962" rRNA 492171..492293 /locus_tag="B565_r009" /product="5S ribosomal RNA" /db_xref="GeneID:10489962" gene 492389..492465 /locus_tag="B565_t016" /db_xref="GeneID:10489963" tRNA 492389..492465 /locus_tag="B565_t016" /product="tRNA-Asp" /db_xref="GeneID:10489963" gene 492866..493183 /locus_tag="B565_0445" /db_xref="GeneID:10490001" CDS 492866..493183 /locus_tag="B565_0445" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391097.1" /db_xref="GI:330828145" /db_xref="GeneID:10490001" /translation="MEQVNKSTFSDVLEYVRMSRRQNKLKREIADNEKKIRDNQKRVL LLDNLSDYIKPGMSIDDVQAIIANMRADYEERVDDHIIKNAELSKERKELSTKLKGMS SHK" misc_feature 492869..493180 /locus_tag="B565_0445" /note="Protein of unknown function (DUF496); Region: DUF496; cl09955" /db_xref="CDD:186882" gene 493392..496475 /locus_tag="B565_0446" /db_xref="GeneID:10486363" CDS 493392..496475 /locus_tag="B565_0446" /codon_start=1 /transl_table=11 /product="membrane carboxypeptidase" /protein_id="YP_004391098.1" /db_xref="GI:330828146" /db_xref="GeneID:10486363" /translation="MGASEQTDLTQVASQDSSVQTSDGNPKRKRRPWWRWLFCFLFLL CLGAVIALVGYEMKTSKLQSQEISRYAAKLTYQVEPGQSKQIAFPEDGPFDKRLGYVQ LPMMQERLLQRGYEVSKQVHFSDALYDYASRGFFVPYTEKVQAGLTLHDCRAEPFYQF KYPTHHYPDFDSIPPLVIQSLLFIENRDLLSNEEPLANPAVDWPRFAKAALSQVGKAL DMQDQSAGGSTLATQVEKYRHSPDGLTLSPTEKIRQMASASVRAYRLGPETLEARKLV AWAYLNSVPLSAAPGYGEVHGLGDGLWVWFGANVDDVNRLLDPARNQNAPLAEQGLAL RQVVSLMIAHRRPSYYLAQGREALATLTDSYLRLFVQEGMITPPLMEAALKAKITFRD FLQSPAITRVNNNKGLQVARTRLSRQLGVQLYDLDRMDLTADTSLNMPLQNEISRYLQ QLADPTFAAQVGLFGERLLSPEKTGDVRYSFTLFEKSPEGFKVRVQTDNTDQPFDINE GSKLELGSTAKLRVLTTYLEIVAELHDNYAGMPVENLRKLAAVSQDNLSRWAISYLMT AQDKSLPVMLEAALDRKYSASPNEGFFTGGGMHTFNNFRREDNNRIPTLRDSLRESIN LPFVRLMRDIVRYSLYKEGNRAQLLKDDKDPRRQEYLAKFADKEGQTYLLRFWRKYRG KTPEEQLDTFLDGLKPSAVRLAAVHRYLMPEASEAAFAAFLAERLPREKLSAKRVNQL YVSYGPGKYSLPDQGYIARVHPLELWLLAYLKEFDKATFADAVAASRDERQEVYSWLF KTRHRSARDSRIRTMLEVEAFLDIHQRWAKLGYPFDHLVPSLATALGSSGDRPAALAE LMGIIQNGGVRSPTLRIEHLSFAKGTPFETEFEPQHTEGTRVMPAEVAAALRSALSKV VEGGTARRIAGAFTLPDGTVLQMGGKTGTGDNRIETVGRYGNVTSSLARNRTATFVFY LGEDHFGTLTAYVPGSQSDKFRFTSALPVQVLKGMAPLLTPYLQPSSHTQCLANQ" misc_feature 493653..496259 /locus_tag="B565_0446" /note="Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]; Region: MrcB; COG0744" /db_xref="CDD:31087" misc_feature 493854..494441 /locus_tag="B565_0446" /note="Transglycosylase; Region: Transgly; cl07896" /db_xref="CDD:195645" gene complement(496585..497394) /locus_tag="B565_0447" /db_xref="GeneID:10486364" CDS complement(496585..497394) /locus_tag="B565_0447" /codon_start=1 /transl_table=11 /product="HAD superfamily hydrolase" /protein_id="YP_004391099.1" /db_xref="GI:330828147" /db_xref="GeneID:10486364" /translation="MYKLIALDMDGTLLNPQGQITPRTHAAISAARAKGVTVVLASGR PLEGMSRYLEELGLTTEHDYVICYNGALVQQVADKRIIRSQLLTGRDASAVARLADEL EVNVHGFSVTQGLISPRVSTYTEHESRLIGMPINLIDFATLPADEQIMKVMMIDEPPQ LSRAIERLPAELYERYTVVQSAPFFLEFMNKQSNKGTGVAALAEHLGLTAAQVICVGD AGNDRHMIEYAGLGVAMGNATDEIKALAQHTTARNDEDGVAQVIEQFVLNA" misc_feature complement(496591..497388) /locus_tag="B565_0447" /note="sugar phosphate phosphatase; Provisional; Region: PRK10513" /db_xref="CDD:182509" misc_feature complement(<497173..497385) /locus_tag="B565_0447" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature complement(order(497266..497271,497365..497373)) /locus_tag="B565_0447" /note="active site" /db_xref="CDD:119389" misc_feature complement(497356..497373) /locus_tag="B565_0447" /note="motif I; other site" /db_xref="CDD:119389" misc_feature complement(497269..497271) /locus_tag="B565_0447" /note="motif II; other site" /db_xref="CDD:119389" misc_feature complement(496606..>496821) /locus_tag="B565_0447" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" gene complement(497509..499176) /locus_tag="B565_0448" /db_xref="GeneID:10486365" CDS complement(497509..499176) /locus_tag="B565_0448" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391100.1" /db_xref="GI:330828148" /db_xref="GeneID:10486365" /translation="MLSKEWLLLSSDMELVCLRIAAGLTKPVTEQDVQALLLASNCRR YQPLPEGIKQAISLLNTLLTNPAAPVPANPIPVGKRQDARLAVIVEKDRMSAIAQITA DWGGKYVTLEQLKEAIAISEIKQGVSEQLLTAAIQSAKEAAPGSQLKLVIANGQPAVN GQDTRYERLVETPAERILKPQELGHGKVDLRDLGSIVTVKAGAPLMRRHPATVGVPGF TVTGQDLPAKDGKDSPMSAGEGTFISPDDPDLLIAGRAGLPCQEKAGMKVDEVLSVKQ VDARHGHIDFEGGLIVSGDVNPGMKIRVSGDIVIGGFIEGGWIEAGGSITVRHGIIGR RNEQGEYLCQLNAQGEIHASYAQYAQLEAGGDIQIQSQLSHCYSRSGQDIKVGDSNMR KGTLLGGTSIANRLIMAPSLGAEAANHTRLQILGGYFTHKEQEHQLKLRQQACQAQLE KIKELVMKLLQLPSDKRNPDTLRKLKPIRDHQLAELAQLDEQLTANQEELRNLMAQME VIATQHLYSGIEVEMASFKRKVTITRGPTRLTIHDETLEMTPYEGHK" misc_feature complement(497539..498924) /locus_tag="B565_0448" /note="Protein of unknown function (DUF342); Region: DUF342; pfam03961" /db_xref="CDD:146542" gene complement(499427..500575) /locus_tag="B565_0449" /db_xref="GeneID:10486366" CDS complement(499427..500575) /locus_tag="B565_0449" /codon_start=1 /transl_table=11 /product="Competence/damage-inducible protein CinA" /protein_id="YP_004391101.1" /db_xref="GI:330828149" /db_xref="GeneID:10486366" /translation="MRIEIISTGDEIVTGLVVDTNAAWLSALLLEQGWQVRRRLTVGD NLADLKTVLQESASRAEVVLVCGGLGPTADDLTAQAAAEAFDQPLTLFPDWLATIEAR YASRGRPMAQSNAKQAWLPQGSEILDNPVGTACGFVVRSGQSQLFFTPGVPFEFKQMV REQILPRLKQLAGAQIDTELRRFYTFGVSESALSDMLDGNPWPAGIELGYRSSMPLIE LKLIGHGASAADMESAERRLLDTIRPWLVGSGDTEPAQQILALLQGKPLALLEGESGG ALLALCHGHPRLEANFSTQLADELAQLPTADAGLQLTIGREGTEGVPLLLSADGMHIG QTVKVSHPDPESRRKILAFAALDMLRRHMLGEPVLGDYLTLARTAQRS" misc_feature complement(499460..500575) /locus_tag="B565_0449" /note="hypothetical protein; Provisional; Region: PRK03673" /db_xref="CDD:179629" misc_feature complement(500063..500572) /locus_tag="B565_0449" /note="Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of...; Region: cinA; cd00885" /db_xref="CDD:58166" misc_feature complement(order(500102..500104,500111..500113, 500123..500128,500366..500374)) /locus_tag="B565_0449" /note="putative MPT binding site; other site" /db_xref="CDD:58166" gene complement(500629..501867) /locus_tag="B565_0450" /db_xref="GeneID:10486367" CDS complement(500629..501867) /locus_tag="B565_0450" /codon_start=1 /transl_table=11 /product="HD-GYP domain-containing protein" /protein_id="YP_004391102.1" /db_xref="GI:330828150" /db_xref="GeneID:10486367" /translation="MTGIKISVDRLQVGNYVSLPLGWREHPFLFSSFKIKSEEEIELI RRLGLKLVTIIPDKSDVPPKPLNQVQPQQQESADAAQRQAQMQQEKDRRIEQLQLYRR NLQQCEKQFQQSLAQVRSVMSKIQSRPLNAIGEAQELVNAMTEQLLSVDEMVLHLVSD SEDGNNLYFHSLNVSVLSMLLAKECCMTADEIRQVGMGALFHDIGKLKIPSQILRKTE PLTKPEQNLMAQHPRYGLDLLNLAKDFPAEAKGIVLHHHEYLDGSGPEGLKGGQLDPL TQMVSLINEYDNLCHMQAKVPYSALSGLYKQRKAQFNPEYLSMLIRLMGIYPPGSVVQ LSNGQVGLVMSVNASRLLYPSVLVYDPRIPRQEAAIIDLQQAELSIAKVIHPKRLPPA VFEYLNPRTRISYYFEHNKA" misc_feature complement(501454..501858) /locus_tag="B565_0450" /note="Domain of unknown function (DUF3391); Region: DUF3391; pfam11871" /db_xref="CDD:152307" misc_feature complement(501001..501372) /locus_tag="B565_0450" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature complement(order(501016..501018,501259..501264, 501358..501360)) /locus_tag="B565_0450" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature complement(501259..501261) /locus_tag="B565_0450" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene 502012..502959 /locus_tag="B565_0451" /db_xref="GeneID:10486368" CDS 502012..502959 /locus_tag="B565_0451" /codon_start=1 /transl_table=11 /product="Homoserine O-succinyltransferase" /protein_id="YP_004391103.1" /db_xref="GI:330828151" /db_xref="GeneID:10486368" /translation="MPIKIPDQLPAAEVLGQENIFVMTESRAVTQNIRPLRVLILNLM PKKIETEIQLMRMLSNSPLQVDVDLLRIDDRESKNTPQAHLENFYHDFEQVRGNNYDG MIITGAPLGLVEFEEVVYWPRIVEIIEWSHQHVTSTLFLCWAVQAALKALYGMEKQTH GEKLSGVYRHHRLDEHEPLLRGFDDEFVAPHSRYAAFDGDLIRAQTDLQIFAESEEAG VYLAATKDCRQVFVTGHPEYDALTLDGEYQRDLAAGLEPAIPVNYYPNNDPGKTPRAS WRSHGHLLFANWLNYYVYQLTSYRVEDIGKVFTYDQGGK" misc_feature 502123..502650 /locus_tag="B565_0451" /note="Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS); Region: GATase1_HTS; cd03131" /db_xref="CDD:153225" misc_feature 502150..502152 /locus_tag="B565_0451" /note="proposed active site lysine [active]" /db_xref="CDD:153225" misc_feature 502435..502437 /locus_tag="B565_0451" /note="conserved cys residue [active]" /db_xref="CDD:153225" gene complement(502960..503478) /locus_tag="B565_0452" /db_xref="GeneID:10486369" CDS complement(502960..503478) /locus_tag="B565_0452" /codon_start=1 /transl_table=11 /product="phosphatase family protein" /protein_id="YP_004391104.1" /db_xref="GI:330828152" /db_xref="GeneID:10486369" /translation="MHPYHPFWSLEVPRVDGQLLLTPCPGTQQVPLTLALDQLRLAGA HGVVTLMTNAELIRLEVAQLGQQVEHEGMRWFHLPIEDDLAPDAAFEAAWQQALPQLR ELLGDGKHLVIHCKGGSGRTGLVAAALLMTLGQPQQEAMAAIKAHRPKAFTLACHRQW LDQLAQRLAQGD" misc_feature complement(503017..503451) /locus_tag="B565_0452" /note="Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (; Region: PTPc; cl00053" /db_xref="CDD:193631" gene 503622..504092 /locus_tag="B565_0453" /db_xref="GeneID:10486370" CDS 503622..504092 /locus_tag="B565_0453" /codon_start=1 /transl_table=11 /product="AsnC family transcriptional regulator" /protein_id="YP_004391105.1" /db_xref="GI:330828153" /db_xref="GeneID:10486370" /translation="MRNLDQLDLDILAHLFRDAGMTNKDLAALVGVAPSTCLERVRKL QQDGVLKGAHCEVDYQALGGHIQAMVSLQLARHSRQIIDAFRDAILALPEVISLFHMG GKDDFLVHLCVSDTEHLRNFVFDHFTSREEVVHLETSLVFEHKFSRSLPCFPQP" misc_feature 503622..504074 /locus_tag="B565_0453" /note="Transcriptional regulators [Transcription]; Region: Lrp; COG1522" /db_xref="CDD:31711" misc_feature 503631..503954 /locus_tag="B565_0453" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene complement(504184..506148) /locus_tag="B565_0454" /db_xref="GeneID:10486371" CDS complement(504184..506148) /locus_tag="B565_0454" /codon_start=1 /transl_table=11 /product="sulfatase" /protein_id="YP_004391106.1" /db_xref="GI:330828154" /db_xref="GeneID:10486371" /translation="MTDLKQRLGPFWPFTVFCALALFSLSFSRIALGLWQLERVDAVA GWQEMLLQGIRVDFATLCWVWGVPAMLTLLLAGPHAIGRGWLQLMRVWLTVGLWLMLF LEISTPSFVTEYGVRPNRLYVEYLIYPKEVFAMLWAGRKAELLLALLFSGAALTSGWW LSGRLVRGLSFPRWYLRPAFALLILAIGFLGARSSLGHRALNPAMVAFAEDPLVNSLT VNSAYSLFFAIKQMGAEEDAGQFYGEMTPQKVLEVMRKESGRPASDFNSDLLPSQTFN EASFQGKPKNLVILLQESLGAQFVGSLGGLPLTPNIDALSQQGWAFEQLYATGTRSVR GIEAVLTGFTPTPAQAVVKLGKSQTNFFTIADLLKQRGYDTSFIYGGESHFDNMRSFF LGNGFTTIVEQKDFDNPVFKGSWGASDEDLMAKADETFKALHKEGKPFFSLVFSSSNH DPFEFPDNRIELFEQPKQTRNNAAKYADYAIGEFFKRAKQSEYWKDTLFLVIADHDSR VGGASLVPIPRFHIPGVIVGDGIAPRKDPRIVSQIDMAPTLLSLMGISADYPMLGKDL TRMPADWPGRAIMQYDKNFALMRGKDVVILQPERAAEGYVYDNASEKLTLAAQPDALK ENALGLALWGSMAYQKSLYQTAKDERTAAN" misc_feature complement(504220..506148) /locus_tag="B565_0454" /note="Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]; Region: MdoB; COG1368" /db_xref="CDD:31559" misc_feature complement(504394..505296) /locus_tag="B565_0454" /note="Sulfatase; Region: Sulfatase; cl10460" /db_xref="CDD:195965" gene 506408..506665 /locus_tag="B565_0455" /db_xref="GeneID:10486372" CDS 506408..506665 /locus_tag="B565_0455" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391107.1" /db_xref="GI:330828155" /db_xref="GeneID:10486372" /translation="MPVFIDVEYVRGWRLFLVLSDGTTGVLDLTPWRTQPLFAKLESE RHCARVFINRHHQLEWPVGCTLSAHEVYHLISPIDEREAFS" misc_feature 506411..506632 /locus_tag="B565_0455" /note="Protein of unknown function (DUF2442); Region: DUF2442; pfam10387" /db_xref="CDD:150972" gene 506911..508878 /locus_tag="B565_0456" /db_xref="GeneID:10486373" CDS 506911..508878 /locus_tag="B565_0456" /codon_start=1 /transl_table=11 /product="TonB-dependent copper receptor" /protein_id="YP_004391108.1" /db_xref="GI:330828156" /db_xref="GeneID:10486373" /translation="MACHMRTPLALLVGGLACHGAAGQEPVQQLDPMVVVATRPASTL EVTLDPKKPGSPMPAADGAGYLKNVTGMSMVRKGGLGGDPVLRGMGMSRLNVQMDGGM LAGGCGGRMDPPTAYVFPQSFDRIRVLKGPQSLEQGATLAGTVLFERDRPEFTAPGLK ADASALYGSFGRDDQMVDMTAGSTDGYLRGQFTHSDSDDYRDGHGDKVRSFYRRENGT AQLGWTPGEHTWLELTAERSNARAAYADRTMDGPMFDRESFGLKLKQEQITTHWQRSE LTLWDNYIDHIMDNFSLRQNSGMKMLSNPDRRNTGGRWANDIALPADWLLTAGLDSNR DQHRSRSGVDYATKDRQRTLRFEQQGGFAELGRQQGAHSYKGGYRQDRVETTRYGAGE QTLYSDTLSLNSGFGRYEYQWSPRWSSYLAWGQAERAPDYWERSKDSTPFTLNPERSR QWDAGLALRSRELDLTLSLFSADIKDYLLYNSKSNKVRNIDAQTRGGELEGRWQFAEQ WRLDGGLAVVYGENQSDNKPLAQMPPLDGKLALGWQPDEALSFTLLGRAVAAQDRVDV GSGTVAGQDQGETPGFFTMNLSGAWQFAKGWQLSAGVDNLFDTFYYEHLSKSVHASQA GLGYEQSGRIPEPGRSYWLSLNYRFASAGVL" misc_feature 507046..508857 /locus_tag="B565_0456" /note="TonB-dependent copper receptor; Region: TonB-copper; TIGR01778" /db_xref="CDD:162530" misc_feature 507082..508857 /locus_tag="B565_0456" /note="TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel; Region: ligand_gated_channel; cd01347" /db_xref="CDD:73259" misc_feature order(507100..507129,507163..507165,507166..507177, 507196..507219,507268..507300,507331..507357) /locus_tag="B565_0456" /note="N-terminal plug; other site" /db_xref="CDD:73259" misc_feature 507820..507822 /locus_tag="B565_0456" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:73259" gene 508988..510616 /locus_tag="B565_0457" /db_xref="GeneID:10486374" CDS 508988..510616 /locus_tag="B565_0457" /codon_start=1 /transl_table=11 /product="glycoside hydrolase family 13" /protein_id="YP_004391109.1" /db_xref="GI:330828157" /db_xref="GeneID:10486374" /translation="MKQGTLRYGGLLGAALLLAACGGSGSSGGESAPPVVNPPVTHPP VATASRACYGDDQPACNLRIYQVMVESFADGDGSANYGVGYGTSQHNGDLQGIIDSLD HIKSLNVNAIWLTPVFDSCAGQGGDNKLDATGYFACDFFTVDPNFGSNAKLKQLVDAA HQRGLYVFLDGVFGHVNKVGVSKPSPEGRLPALTSGGAGYPGQLVDYSKPESLAYFKE VARYWVEQYGIDGWRLDQAYQLGLDDWRAIRSEVEQASAARKAAGQQWGTLGYMVGEV WKGADDIRAQAYGSSDNPALSSAFDFPLRYGIVQALAVEESGKGGQGASVLDASWNKV ENYPNHAMPNLMLGNHDLVRFGDLLERGNFKSTEYWQRHKAAFSFMAARSGPITFYYG EEFGDEVPGFAAKVSGDCAAQGLCDDHVARSDGKVPAVTGFVPSSEQAELKEWLAQLL AMRAAHPALYQGERVKLVADGSLYGDIKQTAGEQIVYLLNLSTTALSYNLPAGKLRSG SALVDLQSGESLAIGGSSVTVEIPPLSGRFLRLQ" misc_feature 509177..510526 /locus_tag="B565_0457" /note="Glycosidases [Carbohydrate transport and metabolism]; Region: AmyA; COG0366" /db_xref="CDD:30715" misc_feature 509261..510175 /locus_tag="B565_0457" /note="Alpha amylase, catalytic domain; Region: Alpha-amylase; cl07893" /db_xref="CDD:164103" gene complement(510700..512139) /locus_tag="B565_0458" /db_xref="GeneID:10486375" CDS complement(510700..512139) /locus_tag="B565_0458" /codon_start=1 /transl_table=11 /product="glutathione synthase/ribosomal protein S6 modification family protein" /protein_id="YP_004391110.1" /db_xref="GI:330828158" /db_xref="GeneID:10486375" /translation="MSTYVIVEELGDWPCHADYLLTARTYLQHGVPTTGGRPRIINLC RNLEHLSAGYYCSLLAQARGHHCLPGLQAISRLQPQQPPAKLWRKAQGWLAQQSEDRI RVRAIFGQCEQNELAGLARYYYGLSQLPLQELTLKRGRHGWSVRQQQSLSPLELSPSE KELMLHHAQALVGTGDEEQAAPLYQLAILVDPDDGRASSDGLALERFIRAAATQGIRA EILPPSAIERLPEFDTLWLRAETAVGHYTFEFAHRAEQLKMPVIDSSRAILACSNKLY LYELMVRSGVPMPPTMVVTRRGRHHVDELVQRLGLPLMVKVPDGAQGRDLAMASDEQQ LARLLDEGLGRSALLLVQSRIPAEFDWRIGFLDGSPLFACRRYRPEPGNRIRRRKHPL DMSRIEALPLNEVPERVLQTARRAVHQLGNGLYGLDLRQQGRDCVLLEIVDNPWIRGD IEDKEAQDLYERLARAFRQRLENRGQTTA" misc_feature complement(510724..511611) /locus_tag="B565_0458" /note="Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis]; Region: RimK; COG0189" /db_xref="CDD:30538" misc_feature complement(510742..511326) /locus_tag="B565_0458" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" gene 512326..512847 /locus_tag="B565_0459" /db_xref="GeneID:10486376" CDS 512326..512847 /locus_tag="B565_0459" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004391111.1" /db_xref="GI:330828159" /db_xref="GeneID:10486376" /translation="MLTVRAARTDDLGAIVNLERYCFPPEVAFGRSRWHYLLAHAKGR TLLLLDEKHQLMGYLCLLEHRGWDRLVIQALAIRWTVRRLGWARRLLEQVIREGKAAG WGAIRLEVADANEEALALYQELGFRPQQRLADYYGRDQHAHRLVLPLVSDEERERRTV ARTQARKPSSQAN" misc_feature 512356..512733 /locus_tag="B565_0459" /note="ribosomal-protein-alanine acetyltransferase; Region: rimI; TIGR01575" /db_xref="CDD:162430" misc_feature 512470..512706 /locus_tag="B565_0459" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene 512879..513124 /locus_tag="B565_0460" /db_xref="GeneID:10486377" CDS 512879..513124 /locus_tag="B565_0460" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391112.1" /db_xref="GI:330828160" /db_xref="GeneID:10486377" /translation="MSCDNCLATAIRAKLGRCPVCAGQAFVIGLIGWLVWWWCGADTS VNALTGLLFALGGSGLLLLHLVVFVWRKATGRELSDE" misc_feature 512879..513103 /locus_tag="B565_0460" /note="Protein of unknown function (DUF3624); Region: DUF3624; pfam12292" /db_xref="CDD:152727" gene 513121..513927 /locus_tag="B565_0461" /db_xref="GeneID:10486378" CDS 513121..513927 /locus_tag="B565_0461" /codon_start=1 /transl_table=11 /product="Short-chain alcohol dehydrogenase family" /protein_id="YP_004391113.1" /db_xref="GI:330828161" /db_xref="GeneID:10486378" /translation="MNLNRFKQINNNIGVDMEVQMIAMVTGASSGFGEAISRQLVQAG YKVIGTGRRAERLAALADELGEQFLPLVFDVQDKAATRAAIAALPAEWSEVDLLVNNA GLALGLEPAHKADLEDWEQMIATNISGLTLLTRLLLPGMVARNRGHVINIGSIAGTYP YPGGNVYGATKAFVKQFSLNLRADLAGTAIRVTNVEPGLCGGTEFSNVRFHGDDAKAA TVYQGVEAIQPEDIANTVLWVSQQPAHVNINSIEIMPVAQTFGPLNISRR" misc_feature 513181..513915 /locus_tag="B565_0461" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 513184..513858 /locus_tag="B565_0461" /note="3-ketoacyl-(acyl-carrier-protein) reductase; Validated; Region: fabG; PRK05653" /db_xref="CDD:180183" misc_feature order(513199..513201,513205..513210,513214..513216, 513271..513279,513421..513429,513574..513582, 513619..513621,513631..513633,513709..513720) /locus_tag="B565_0461" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature order(513496..513498,513580..513582,513619..513621, 513631..513633) /locus_tag="B565_0461" /note="active site" /db_xref="CDD:187535" gene complement(513988..515469) /locus_tag="B565_0462" /db_xref="GeneID:10486379" CDS complement(513988..515469) /locus_tag="B565_0462" /codon_start=1 /transl_table=11 /product="Dipeptidase D-type, U34 family" /protein_id="YP_004391114.1" /db_xref="GI:330828162" /db_xref="GeneID:10486379" /translation="MKKHTLSLLSATLLTLLTLLGTSADACTGLIVGKGASLDGSVMI ARNEDFGVNNWNKYLAFRPAQQNEGKLWKLGNGLEVPMPKAFFAYSAIHDWDATTSDP AGKYYEERGINEFNVAISATTSAEVNDKARKADPLIEKGVIEAIIPTLILPQAKTAKE GVELLGRYVEQYGAGEGNSLYLADVNEAWLMEIGSGHHWIAVRVPDDSYAMVANGLRI HGVNLDSADVLHSPKLLEFVREHKLLDNADPKDFNFAKAFGVIADPYNVDREWLGQNM LTASHKQATRQAQYPLFMKPDAPIAVPDVARVLSATYDGTPLAGKAERPIRVDRQLES HVIQLRKEMPKELQGLIWQSYGVLAESVMVPLYNSLENYPLPYRTGSDSYSDDSAYWQ FRSLTALASADPDKYLPLLRGVWSKESNKLYKEVAILDKSLKQAYASDKATAIGLAAD YSYGQLEQTYQMAKELRYKLMTDLTKRSEKKYSPEEFKKIMSL" misc_feature complement(514225..515394) /locus_tag="B565_0462" /note="Peptidase family C69; Region: Peptidase_C69; cl01920" /db_xref="CDD:120966" gene 515944..516399 /locus_tag="B565_0463" /db_xref="GeneID:10486380" CDS 515944..516399 /locus_tag="B565_0463" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391115.1" /db_xref="GI:330828163" /db_xref="GeneID:10486380" /translation="MDIKPYSQQLAQSASNNRALATLNSASSGGQGGGWEEMVSLSTQ RMTGQAQQVLTYEHLAKNSKLPPALDMSSDKGGVVQQLVDKALGFDRKKFNEIEEKLK TIADNKKLTPEERAEQSKPLNEQREVMLKEAMDRLTGKKSSSKDEAKTA" gene 516543..517694 /locus_tag="B565_0464" /db_xref="GeneID:10486381" CDS 516543..517694 /locus_tag="B565_0464" /codon_start=1 /transl_table=11 /product="NADH-dependent iron-containing alcohol dehydrogenase" /protein_id="YP_004391116.1" /db_xref="GI:330828164" /db_xref="GeneID:10486381" /translation="MYNFQYANPTRICFGEGQIASLPELIPPGGRLLVLYGGGSIKQN GVYEQLTRALEGVTWQEFSGIGANPRFELLMEAVAQVKRERIDFLLAVGGGSVVDGTK FVAAAACYEGDDPWDICGKQASVHKALPMGCVLTLPATGSESNPTSVVSRGDVKISFR SPLVQPQFAVLDPATTYSLPPRQTGNGVVDAFVHIAEQYLTFPVGGEVQDRLAEGLLQ VLVENGPRALAEPTNYQVRANLMWAASLALNGLIGCGVPQDWASHAIGHQLTALYGLD HGQSLAVVLPSLLRERASQKQDKLAQFAERVWHSTREDKALRIEEAIIRTEQFFQKMG LGTRLADYGLSESCIPAVCSNLKRVGRTALGEQQDIDPDRVARILARAL" misc_feature 516549..517679 /locus_tag="B565_0464" /note="Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process; Region: BDH; cd08187" /db_xref="CDD:173946" misc_feature 516567..517607 /locus_tag="B565_0464" /note="Iron-containing alcohol dehydrogenase; Region: Fe-ADH; pfam00465" /db_xref="CDD:189559" misc_feature order(516567..516569,516573..516578,516582..516587, 517194..517196,517206..517208,517254..517259, 517266..517268) /locus_tag="B565_0464" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173946" misc_feature order(516654..516662,516741..516746,516822..516830, 516837..516839,516948..516953,516960..516962, 516966..516968,516975..516977,516981..516983, 516987..516989,517008..517010,517065..517067, 517074..517079,517110..517112,517122..517124, 517329..517331,517371..517373) /locus_tag="B565_0464" /note="active site" /db_xref="CDD:173946" misc_feature order(517110..517112,517122..517124,517329..517331, 517371..517373) /locus_tag="B565_0464" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173946" gene complement(517784..518242) /locus_tag="B565_0465" /db_xref="GeneID:10486382" CDS complement(517784..518242) /locus_tag="B565_0465" /codon_start=1 /transl_table=11 /product="methylglyoxal synthase" /protein_id="YP_004391117.1" /db_xref="GI:330828165" /db_xref="GeneID:10486382" /translation="MEQIAREMAPHKRVALVAHDNMKTPLLNWVMRRKEELKLHHLYA TGTTGTMLGKQAQLPITCLFSGPMGGDQQLGALIAEGKIDVLIFFWDPLNAVPHDPDV KALLRLAAVWNIPVATNEATADFIMDSPHMRQAFSVQIPDYAGYLKARTE" misc_feature complement(517862..518206) /locus_tag="B565_0465" /note="Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to...; Region: MGS; cd01422" /db_xref="CDD:29634" misc_feature complement(order(517949..517951,518030..518032, 518045..518050,518099..518104,518108..518110, 518174..518176,518192..518194)) /locus_tag="B565_0465" /note="active site" /db_xref="CDD:29634" misc_feature complement(order(517868..517870,517877..517888, 517895..517912,517916..517924,517931..517933, 517940..517942,517967..517969,518006..518008, 518024..518029,518039..518044,518048..518053, 518102..518104,518183..518185)) /locus_tag="B565_0465" /note="dimer interfaces [polypeptide binding]; other site" /db_xref="CDD:29634" misc_feature complement(order(517949..517951,518030..518032)) /locus_tag="B565_0465" /note="catalytic residues [active]" /db_xref="CDD:29634" gene complement(518427..518903) /locus_tag="B565_0466" /db_xref="GeneID:10486383" CDS complement(518427..518903) /locus_tag="B565_0466" /codon_start=1 /transl_table=11 /product="Bacterioferritin" /protein_id="YP_004391118.1" /db_xref="GI:330828166" /db_xref="GeneID:10486383" /translation="MKGDPKIIAHLNKVLANELIAINQYFLHARIYDDWGLKALGHKE YHESIDEMKHADELVKRVLFLEGLPNLQDLGKLRIGETVEEMLRCDLSLEMDAIPDLK VAIAYAESVQDYISRDLFQEILEDEEEHVDWLETQLDLIDRIGLENYQQSQLHHGS" misc_feature complement(518442..518900) /locus_tag="B565_0466" /note="Bacterioferritin, ferritin-like diiron-binding domain; Region: Bacterioferritin; cd00907" /db_xref="CDD:153099" misc_feature complement(518472..518882) /locus_tag="B565_0466" /note="Ferritin-like domain; Region: Ferritin; pfam00210" /db_xref="CDD:189451" misc_feature complement(order(518736..518738,518748..518750, 518769..518771,518814..518816,518835..518837, 518859..518861)) /locus_tag="B565_0466" /note="heme binding site [chemical binding]; other site" /db_xref="CDD:153099" misc_feature complement(order(518523..518528,518601..518603, 518613..518615,518622..518627,518742..518744, 518751..518753,518829..518831,518841..518846, 518850..518855)) /locus_tag="B565_0466" /note="ferroxidase pore; other site" /db_xref="CDD:153099" misc_feature complement(order(518514..518516,518523..518525, 518601..518603,518622..518624,518742..518744, 518751..518753,518829..518831,518850..518852)) /locus_tag="B565_0466" /note="ferroxidase diiron center [ion binding]; other site" /db_xref="CDD:153099" gene complement(519048..519392) /locus_tag="B565_0468" /db_xref="GeneID:10486384" CDS complement(519048..519392) /locus_tag="B565_0468" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391119.1" /db_xref="GI:330828167" /db_xref="GeneID:10486384" /translation="MVISSGCQHCPQGVAQWQAGDLITNGYLHYEPFSFRFHLIPQEV TIMYVCLCRGITDTQIRKAVQSGKSEFRQLKQSLEVGAQCGKCVRMTMEIIAAELDKM EQEQPVLYYEVA" misc_feature complement(519066..519254) /locus_tag="B565_0468" /note="BFD-like [2Fe-2S] binding domain; Region: Fer2_BFD; cl01093" /db_xref="CDD:194032" gene 519391..519702 /locus_tag="B565_0467" /db_xref="GeneID:10486386" CDS 519391..519702 /locus_tag="B565_0467" /codon_start=1 /transl_table=11 /product="transcriptional activator HlyU" /protein_id="YP_004391120.1" /db_xref="GI:330828168" /db_xref="GeneID:10486386" /translation="MLKKLFSALFGGEPTKAPEVTPTEYAGYLIYPEPMAEGGQYRLA GRITKELDGVLQTHRFIRSDLFANPADAERFMVQKAHTFIDQMGDRMFEPRKPADSQA S" misc_feature 519397..519666 /locus_tag="B565_0467" /note="Transcriptional activator HlyU; Region: HlyU; cl02273" /db_xref="CDD:154831" gene 519699..521764 /locus_tag="B565_p001" /note="hypothetical protein" /pseudo /db_xref="GeneID:10486385" gene complement(521751..522470) /locus_tag="B565_0469" /db_xref="GeneID:10489946" CDS complement(521751..522470) /locus_tag="B565_0469" /codon_start=1 /transl_table=11 /product="short chain dehydrogenase/reductase family oxidoreductase" /protein_id="YP_004391121.1" /db_xref="GI:330828169" /db_xref="GeneID:10489946" /translation="MSEGVVVIGASGGIGAALVAHWLATGVGPVIAISRQPAPAGASS PALHWLCCDYSDEQMTEVVARIAELAPRPHRVVICNGILHQGEIQPEKRLEAINLDAM TRLYQTNALLPLRWISQLLPLFGREPCTLAVLSARVGSIGDNRAGGWYGYRASKAALN MLLKCAAIELARRAPGVKLLAFHPGTVDTQLSRPFHANVPAGNVQSPELVADHLINLM NRLQPDGELSFLDWQGKPIEW" misc_feature complement(521754..522383) /locus_tag="B565_0469" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(order(521910..521921,522003..522005, 522015..522017,522063..522071,522228..522230, 522231..522233,522363..522371)) /locus_tag="B565_0469" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature complement(order(522003..522005,522015..522017, 522063..522065,522144..522146)) /locus_tag="B565_0469" /note="active site" /db_xref="CDD:187535" gene 522652..523668 /locus_tag="B565_0470" /db_xref="GeneID:10486387" CDS 522652..523668 /locus_tag="B565_0470" /codon_start=1 /transl_table=11 /product="CheY-like receiver" /protein_id="YP_004391122.1" /db_xref="GI:330828170" /db_xref="GeneID:10486387" /translation="MMSKDGEERKSILTESGTNELEIIEFHLKKQLPDGREKTAYYGI NVAKVREVIRVPETTDYPNAQRHMVGVFSLRDRLIPLVDLAGWLGIKTNPDPSHKVVI VTDFNKMANGFLIDSVSRIHRVSWEDVESPSQFLEAGENDCVVAVVRRDGNLIMILDF EKIIADINPELSMEKYDVTQDRKVLIDDRMMALRQGKTILVVDDSAFIRKMIETTLRT AGYNVITAKDGGEGLEMMTDFDRLAQEERMPVTGFVNAVITDVEMPRMDGMHLLKRLR DTPSYKEMPIVMFSSLMSDDNRQKALQLGANDTITKPEIGRMVGMMDHMLLGIAPPSP ANNI" misc_feature 522709..523152 /locus_tag="B565_0470" /note="CheW-like domain. CheW proteins are part of the chemotaxis signalling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and...; Region: CheW_like; cl00256" /db_xref="CDD:185867" misc_feature 523249..523590 /locus_tag="B565_0470" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(523258..523263,523429..523431,523453..523455, 523519..523521,523576..523578,523585..523590) /locus_tag="B565_0470" /note="active site" /db_xref="CDD:29071" misc_feature 523429..523431 /locus_tag="B565_0470" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(523438..523443,523447..523455) /locus_tag="B565_0470" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 523585..523590 /locus_tag="B565_0470" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" gene 523858..524322 /locus_tag="B565_0471" /db_xref="GeneID:10486388" CDS 523858..524322 /locus_tag="B565_0471" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391123.1" /db_xref="GI:330828171" /db_xref="GeneID:10486388" /translation="MKGWVESTEGGSSMSHWKQQTREGNRLFDCGEYHQALAHYQQAL WLARQQLVQWHDADEAVAALVVAHHNLADLLVAMTLPDRAADLLCYVHDCLLATCHSP ACSSRLREAALRHTRTTRAELLTFVQRHGSHAGIMRSLGHCLCQSEPSSRLH" gene 524340..524954 /locus_tag="B565_0472" /db_xref="GeneID:10486389" CDS 524340..524954 /locus_tag="B565_0472" /codon_start=1 /transl_table=11 /product="Superoxide dismutase" /protein_id="YP_004391124.1" /db_xref="GI:330828172" /db_xref="GeneID:10486389" /translation="MSHTLPALNYAYDALEPHIDALTMEIHHSRHHQTYINNLNAALE TAPELAALPVEALLRRFDTLPATLQGAVRNHGGGHANHSLFWLVMSPQGGGEPGGELA LAIERELGGFDAFKQAFTQAALSRFGSGWAWLVVDKAGRLQVESSANQDSPLMHGHTP ILGLDVWEHAYYLKYQNKRPDYIAAFYQVVDWAEVARRYQAARG" misc_feature 524340..524948 /locus_tag="B565_0472" /note="Superoxide dismutase [Inorganic ion transport and metabolism]; Region: SodA; COG0605" /db_xref="CDD:30950" misc_feature 524343..524609 /locus_tag="B565_0472" /note="Iron/manganese superoxide dismutases, alpha-hairpin domain; Region: Sod_Fe_N; pfam00081" /db_xref="CDD:189380" misc_feature 524652..524933 /locus_tag="B565_0472" /note="Iron/manganese superoxide dismutases, C-terminal domain; Region: Sod_Fe_C; pfam02777" /db_xref="CDD:145761" gene complement(525039..525986) /locus_tag="B565_0473" /db_xref="GeneID:10486390" CDS complement(525039..525986) /locus_tag="B565_0473" /codon_start=1 /transl_table=11 /product="SanA protein" /protein_id="YP_004391125.1" /db_xref="GI:330828173" /db_xref="GeneID:10486390" /translation="MKKFAKILLACLVLLLALIAMLLGYSEWIVSDARHYTYDRVDKV PYNRVAVVLGTSKYLSGGGPNHYFKYRIKAAAELYNNAKVDFIIVSGDNATVQYNEPR QMRRALIKAGIPASAIYMDFAGFRTLDSVVRAKEVFGQERFTVVSQGFHNERAIFIAR HFGIDAVGFNAEDPSAYQGIRTRVREVFARLMGLLDLYVLDKGPKFLGAPVPIGLPVP CQSLSTIGSLQPCLKQPKPAVDEAKPAAVSAAVATESATSSASATTEQVTPALSAAAT TDPVTPAKSAAETTAEAPSAALPTLPMTPSAASVSTATP" misc_feature complement(525417..525842) /locus_tag="B565_0473" /note="YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been...; Region: YdcF-like; cd06259" /db_xref="CDD:99750" misc_feature complement(order(525429..525431,525525..525527, 525534..525536,525546..525548,525597..525599, 525606..525608)) /locus_tag="B565_0473" /note="putative active site [active]" /db_xref="CDD:99750" gene complement(526174..528933) /locus_tag="B565_0474" /db_xref="GeneID:10486391" CDS complement(526174..528933) /locus_tag="B565_0474" /codon_start=1 /transl_table=11 /product="Collagenase family" /protein_id="YP_004391126.1" /db_xref="GI:330828174" /db_xref="GeneID:10486391" /translation="MNRSGTGWLLLASPLLLATSSAQANYSPNDWRQYQLTGESSRQL AARITEITYELKARSSNAPYQQLRVYRRFDWQSSDLAALAEQQCGEPQLKVDAGWQIR FVRCEDRIPAGKLIPASSYDFGYGLKQGRWEQLAGTPTAQRQDRLPLPQAIILGQSER ELDRCELNAQGHCAESEWHYQPQDWQQLQVLEETPSERDGRLEQIFFRLQPVAGSQAA AQVSEIHVWRRYQWQLDQLTPQQECDEPQERKEGSNTIRYRICRQVIPAGSEVQVTLQ DSGYQYPVAGGEWQPLPESKEWQESRVLNRPIVLASKEEQLECRRANGRLCSEPEQPD VDLLDSDAAKLVADVSGQNSPAWQADYGHDDAKLMAVVRGMRALLAANQPTHPAMDKL LYYVRAHNYHGGVGKESDQAARALAGVMIDLLNHPLLLGAEPQDQAGTVLEAWSVAAQ GQLGQAAFRQSAAPMLAQLNQALGYAVQHAAQINGHKPWADGLFELLNLVDQSASYGQ QADFSAAVLQQEAALRQSLLQLGLSELALWKQRDGSRDLFIFNNILDAHSRLYQMMRY LHHTSPDKAIAYRQQLDRDVIAIMRQQGLVPGGQHPAAMLEEVSLTLSSYYLTYTDRT SEACVSGEFAGLCTPIRMEDILPFEHTCSPTLRLRAQDLTQAQAEGICRELGDEEQRF HQQMETGWQPVADDHNEALELVIFNSSADWGRYGSALFGVSTDNGGIYIEGDPARPDN QARFFAYEAEWKRPAFQVWNLRHEYVHYLDGRFNQYGSFGHYPLNRTTWWAEGIAEYI AHGQCFARGLDNVANRPANQRPTLAAILHLDYDQGGEMVYSWSYTVHRFLNDTGRGAS WLALAQALRNPDRQQAMSDFEGELDRLIANDSDAYQAWLARDLLPWWQANKESDACKG NDSAH" misc_feature complement(526384..527001) /locus_tag="B565_0474" /note="Collagenase; Region: Peptidase_M9; pfam01752" /db_xref="CDD:110729" gene 530740..531282 /locus_tag="B565_0475" /db_xref="GeneID:10486392" CDS 530740..531282 /locus_tag="B565_0475" /codon_start=1 /transl_table=11 /product="Fimbrial protein" /protein_id="YP_004391127.1" /db_xref="GI:330828175" /db_xref="GeneID:10486392" /translation="MKANKILVAMGVGSMLLCGSAFAAGGAGSGKVTFNGEIINAPCS VAPESVDQVVEMGQISTKELANGGESSSKPFSIKLLNCEISDKEDAVKVTFSGAKDPV DSSLLVIGGGDAAGAGIKMTAPGGAPIVLGTPTAAFGLVNGDNELPFSAVLKGYASQD TNPLKAGAFTAVTNFTLSYE" misc_feature 530830..531279 /locus_tag="B565_0475" /note="Fimbrial protein; Region: Fimbrial; cl01416" /db_xref="CDD:186430" gene 531382..531771 /locus_tag="B565_0476" /db_xref="GeneID:10486393" CDS 531382..531771 /locus_tag="B565_0476" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391128.1" /db_xref="GI:330828176" /db_xref="GeneID:10486393" /translation="MMAAMVLQLVMMAGSVHANELTDGLAESGCTLEVLRSIPLQAQQ PGTLKISGCQVDGATVASLPFISMSVRGAMSDELGILNNGQYHKVSGERFIVSDIVNS DLEFNLGLISSQLFFPDSTTLLELNYM" gene 531839..534373 /locus_tag="B565_0477" /db_xref="GeneID:10486394" CDS 531839..534373 /locus_tag="B565_0477" /codon_start=1 /transl_table=11 /product="outer membrane usher protein" /protein_id="YP_004391129.1" /db_xref="GI:330828177" /db_xref="GeneID:10486394" /translation="MSVSTSDSVRKKHYSKMAFMLCVSGLMAVANHAWAETEFNIDAL DLDERTKIDLSQFADEGYILPGDYYLEIEVNKNKLPLQKIPFYESDTGKGKGGVACLP QDVIPKLALTDEAIAKIDTWHDGQCANLLALDGVVVSNDIGNGLLRIAIPQAWMKYSD PNWIPPEQWDEGIPGMMLDYNINAQVNEGDGYSNHNISSYGTLGFNYGAWRLRGDYQA SSYWGDNERTSTELNRIYAYRPLPNMAAKLTVGEQQLNSQLIDGFRYTGVNLANDERM LPPSLQGYAPEVSGIAKTNAKVTISQSGRIIYETNVPAGPFRIQGLDSSVRGRLDVRV EEQDGSVNSFQVDTATVPYLTRPGYVRYNLAVGAPSEQTDSVHDVHGPAFVTGDFSWG VANSWSLYGGSLIAGEYNSMGLGIGRDLYAFGAISADLTQSIAKLPGLSTKIGQSVRV NYAKQFDEYNSSITFAGYRFSQHDFMTMSQFLNNKDRLENNTTTSSDDYNTWGDKELY TITANKTFWAEDAAKALTVYLDYTHRTYWEHDAEDRYGLTINKNVNIGSFKDVSVYVS AYKTKTENYEDDKSVMLTLSVPIGDRKSAGYSVQSSNGKVTHLATYQDYSRPDDTYQL GAGVQSNGHAVARGYYNHNSDIGAVSLNAYSVQSEYTSVGASLRGGLTATQHGAALHQ ATRRGGTRMMVDTDNTSGVSFNNGRAVTNRFGVAVISDMTDYRKSDTRVDVDQLSDDI DAMNAIKQGTLTEGAIGYNAFEIAEGFKLLANVRLPDGSVPPFGATVVKDSGRVLSVV DEDGLVYLTGVKPNEAFELSWGGARQCKIVAPQQVTDLSMKTLTCK" misc_feature 531944..534340 /locus_tag="B565_0477" /note="pilin outer membrane usher protein SafC; Provisional; Region: PRK15223; cl14650" /db_xref="CDD:189263" misc_feature 531950..534319 /locus_tag="B565_0477" /note="Fimbrial Usher protein; Region: Usher; pfam00577" /db_xref="CDD:109627" gene 534384..535115 /locus_tag="B565_0478" /db_xref="GeneID:10486395" CDS 534384..535115 /locus_tag="B565_0478" /codon_start=1 /transl_table=11 /product="Fimbrial chaperone protein" /protein_id="YP_004391130.1" /db_xref="GI:330828178" /db_xref="GeneID:10486395" /translation="MKKLLSYICLAALGMTSLNVSAAIVLDRTRAVYPGGAKSISLNI KNENQKLPYLAQAWIEDAQGQKISSPFVVLPPVQRVDANQKSIVRIASVPAIESLPKD RESIYYFNLREIPPKSEKSNVMQIAVQSKIKLFYRPEAILPERGAVWQDQVLITKQGK ALKVNNPTPYYITYVGLGHPQGKERTTIKGFSAFMVSPKSELTVTIPETLGNEFVISY VNDYGGYMDIKYQCAGNACKAVKSE" misc_feature 534387..535097 /locus_tag="B565_0478" /note="putative periplasmic fimbrial chaperone protein SteC; Provisional; Region: PRK15274" /db_xref="CDD:185177" misc_feature 534450..534806 /locus_tag="B565_0478" /note="Gram-negative pili assembly chaperone, N-terminal domain; Region: Pili_assembly_N; pfam00345" /db_xref="CDD:189511" misc_feature 534867..535064 /locus_tag="B565_0478" /note="Gram-negative pili assembly chaperone, C-terminal domain; Region: Pili_assembly_C; pfam02753" /db_xref="CDD:190409" gene 535121..536149 /locus_tag="B565_0479" /db_xref="GeneID:10486396" CDS 535121..536149 /locus_tag="B565_0479" /codon_start=1 /transl_table=11 /product="type I pilus assembly protein FimE" /protein_id="YP_004391131.1" /db_xref="GI:330828179" /db_xref="GeneID:10486396" /translation="MLRSIFCSSLMLLAGTALANGYVTPNPTHDYYISLDKADIQNRP GFTTKAFEWNLGGQYSGIVTCPDRSIPQSPVYYKATMTDGLPQVGDGFVKLNDFLDMK VEIWIAGWKKKFVTAPFPNESNDYPNYSCTKGKETRINNFESGSRGKVTFRVKKQIIN GVQISDRQVVEMYGRLGATTTDFNSLPMSRITITSAILYVPEECVINGGQTIEVEFGD LPGSGLDGNNFEKTVPLTFQCRGGVFEGDALKINLGISGKPTTFSQDYLRTTRDGYQG GNVISDLGIKFKQLDGSQLKLNTFYPVSMQGNIGDWGFIAAPVTPTGADIPAGDFYAT ATIVAEFQ" misc_feature 535151..536146 /locus_tag="B565_0479" /note="Fimbrial protein; Region: Fimbrial; cl01416" /db_xref="CDD:186430" gene 536185..536712 /locus_tag="B565_0480" /db_xref="GeneID:10486397" CDS 536185..536712 /locus_tag="B565_0480" /codon_start=1 /transl_table=11 /product="Fimbrial protein" /protein_id="YP_004391132.1" /db_xref="GI:330828180" /db_xref="GeneID:10486397" /translation="MVLYPLLGVTAAPRASNDLELLGNTVHLHGRIIDQPCVVSPESL DQEVEMGVVDVKELYANGVAELVPFSIRLTNCKPGIFRMAKVTFTGSQDTELSGGLAF TAGIAKGAGIRLYDVAQSPLNLGSASRGYLLGGAADNELQFFARVEGHPAALTAKNIQ PGDYSAVANFIVAYE" misc_feature 536257..536709 /locus_tag="B565_0480" /note="Fimbrial protein; Region: Fimbrial; cl01416" /db_xref="CDD:186430" gene complement(536715..537950) /locus_tag="B565_0481" /db_xref="GeneID:10486398" CDS complement(536715..537950) /locus_tag="B565_0481" /codon_start=1 /transl_table=11 /product="transcriptional regulatory protein, C terminal protein" /protein_id="YP_004391133.1" /db_xref="GI:330828181" /db_xref="GeneID:10486398" /translation="MSNRIYKIAEDIFFSAAIFRISKGDKDIKLSNKEAELLEMLCDE AGTVIPRSKLQDALWPNQDNTDTNLNRQILSLRRKLESFGLMDAIDTIPRVGYMFCAP IELAGESEEPAPAEEIHAPTPSPAPQARRQYTRRKYDRYFSPKRILLFALLLVSLTSL ALVIYNYATANTLRTINLGQISLYMTSETEKALNVKIDSLTPLIKPVSRKADEQISIL VGKEAISYFSINNSSRKLSENIFLLRSGHPVAEEVQCVITTMNQQGNNVSNNYYNNQE TTVRYHRDCQAPDNWVEMTRKSKYIVTMNREIVVATVIATDNQGKTLFNLDSVGDLER DNGDISVEIKNTIVNFIDQQALTNNALVATLVAALTPPKQKAKFIQLPGGIYLSSYLG GVITWPSHGNTKVIQRNDF" misc_feature complement(537654..537920) /locus_tag="B565_0481" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cd00383" /db_xref="CDD:29475" misc_feature complement(order(537663..537665,537678..537680, 537711..537716,537738..537740,537798..537803, 537858..537860)) /locus_tag="B565_0481" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29475" gene complement(538251..539654) /locus_tag="B565_0482" /db_xref="GeneID:10486399" CDS complement(538251..539654) /locus_tag="B565_0482" /codon_start=1 /transl_table=11 /product="O-succinylbenzoate-CoA ligase" /protein_id="YP_004391134.1" /db_xref="GI:330828182" /db_xref="GeneID:10486399" /translation="MIDPSRSPEQTPCPVRHRAITAPNRIAIHAASPLSYRQLDARLN SLCQQLEQAGVRRGAHLAAVVRGALEDVLLAWACVRSGVVFCPLNPAFPLEKQRELAV QLDADAFWSAGEIPADNWQPLQLDFTRKLPASEETWPLESTQLNNMILTSGSSGTPKA VVHRLCNHLASARGSATLIPLDEKSGWLLSLPLFHVGGYAILFRVFLAGATLVLDQRE RSLKERLECQPITHLSLVPTQLWRLLAEGFDPARTRLRELLLGGAAIPQPLVKRLCAM GLEPKVSYGLSEMGSQVCTAIPGDAGIVGKPLPGREVCIREQEICVRGATLFAGYYRD GEQELPLDDEGWFHTRDKGRFTAAGELLVEGRLDNLFISGGENIQPETIEQRLVDHPA VAQALVVPVPSDEWGQRPAAFIDWHGEPVPYPELATWIRSTLPGFMVPDHWLPWPDLG GNLKPQRKQFQNIIRSQ" misc_feature complement(538254..539615) /locus_tag="B565_0482" /note="O-succinylbenzoic acid--CoA ligase; Provisional; Region: PRK09029" /db_xref="CDD:181616" misc_feature complement(538281..539546) /locus_tag="B565_0482" /note="Acyl-protein synthetase, LuxE; Region: LuxE; cl10450" /db_xref="CDD:186997" gene complement(539647..540576) /locus_tag="B565_0483" /db_xref="GeneID:10486400" CDS complement(539647..540576) /locus_tag="B565_0483" /codon_start=1 /transl_table=11 /product="O-succinylbenzoic acid (OSB) synthetase" /protein_id="YP_004391135.1" /db_xref="GI:330828183" /db_xref="GeneID:10486400" /translation="MTLALYRYQLPFTQPLTFHGKVEVAREGLLVRINDGWGEIAPLP GFSKESLQQAEAEALATLAALAAGDTPNPVLPSVQFGLDCARRTWPEQRNPLPEPYPL IQGSPQELLRNWKEWLHRTPGKAKLKVARYPMRDELALIRLLCDRLPSLKLVLDANQG WTREEAWTFCGHLDPNRIEYLEDPCADFADIAFVANRTGMPVALDELLAQGKPWEPIP QLRALVLKPTLLGSLANCEALIARARELRLKVIISSCFESDLGLNQLFHLAGEWAPEQ APGLDTRRWMAGNLLGENGKPELSRLEQLYYRD" misc_feature complement(539662..540573) /locus_tag="B565_0483" /note="O-succinylbenzoate synthase; Provisional; Region: PRK05105" /db_xref="CDD:179938" misc_feature complement(539731..540564) /locus_tag="B565_0483" /note="o-Succinylbenzoate synthase (OSBS) catalyzes the conversion of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate (o-succinylbenzoate or OSB), a reaction in the menaquinone biosynthetic pathway...; Region: OSBS; cd03320" /db_xref="CDD:73346" misc_feature complement(order(539740..539742,539815..539820, 539899..539901,539962..539964,540031..540033, 540103..540105,540109..540111,540199..540201)) /locus_tag="B565_0483" /note="active site" /db_xref="CDD:73346" gene complement(540576..541436) /locus_tag="B565_0484" /db_xref="GeneID:10486401" CDS complement(540576..541436) /locus_tag="B565_0484" /codon_start=1 /transl_table=11 /product="Naphthoate synthase" /protein_id="YP_004391136.1" /db_xref="GI:330828184" /db_xref="GeneID:10486401" /translation="MIEAMTEAELYAPVEWQDCSAGYEDILYHKSNDGIAKITINRPQ VRNAFRPRTVKEMLQALADARYDDQIGTIILTGFGEKAFCAGGDQKIRGDYGGYRDDE GTHHLNVLDFQRDIRTCPKPVVAMVAGYAVGGGHVLHMMCDLTIAADNAQFGQTGPKV GSFDGGWGASYMARIVGQKKAREIWFLCRMYDAQQALDMGLVNTVVPLAELERETVRW CREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNEKRR PDFSKYKRNP" misc_feature complement(540579..541406) /locus_tag="B565_0484" /note="dihydroxynaphthoic acid synthetase; Validated; Region: PRK07396" /db_xref="CDD:180958" misc_feature complement(540771..541361) /locus_tag="B565_0484" /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase...; Region: crotonase-like; cd06558" /db_xref="CDD:119339" misc_feature complement(order(540957..540959,540966..540971, 541035..541043,541047..541049,541170..541184, 541194..541196,541293..541295,541299..541301)) /locus_tag="B565_0484" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(541035..541037,541176..541178)) /locus_tag="B565_0484" /note="oxyanion hole (OAH) forming residues; other site" /db_xref="CDD:119339" misc_feature complement(order(540771..540776,540783..540785, 540828..540830,540837..540839,540870..540872, 540879..540884,540888..540893,540897..540902, 540915..540920,540924..540932,540936..540938, 540954..540965,540999..541010,541071..541073, 541095..541097)) /locus_tag="B565_0484" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene complement(541429..542196) /locus_tag="B565_0485" /db_xref="GeneID:10486402" CDS complement(541429..542196) /locus_tag="B565_0485" /codon_start=1 /transl_table=11 /product="putative hydrolase or acyltransferase" /protein_id="YP_004391137.1" /db_xref="GI:330828185" /db_xref="GeneID:10486402" /translation="MANKNAHVPLVMLHGLLGDSGDWQPVIDRLPAIRCIALDLPGHG QHRALTVSNFEQSHQWLVAELASRNIERYLLAGYSLGGRLALYHASRKPTGLRGLLLE NCNPGLPACERAARIQHDEQWARRFEQEPLADVLADWYRQGVFADLDDAARASQIARR LGNDGQGIATMLRATSLGKQPDLAPWLMASQLPVTWVSGKRDHKFHQLACQLANQDRR INHLVLDGGHNLHAHQPDNFARLLAEWVNQQEETSHD" misc_feature complement(541456..542172) /locus_tag="B565_0485" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Region: menH_SHCHC; TIGR03695" /db_xref="CDD:188374" misc_feature complement(541432..542169) /locus_tag="B565_0485" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" gene complement(542186..543943) /locus_tag="B565_0486" /db_xref="GeneID:10486403" CDS complement(542186..543943) /locus_tag="B565_0486" /codon_start=1 /transl_table=11 /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase" /protein_id="YP_004391138.1" /db_xref="GI:330828186" /db_xref="GeneID:10486403" /translation="MPTRKEPASEEFACPPFSSQHATFNHVWSSLLLEELFRLGVRDI ALAPGSRSAPLTMAAAAHQGFRRHLHFDERGLGFMALGLAKGSNRPVAVIMTSGTAVA NLWPAVAEAQLTGVPLIILSADRPHELIDNGANQAIDQQGIFGRYPVYQQNLPSPTPT IPAAFVLSSVDQALAKQALTPGVVHFNCMYPEPLYPGEHYQDFSDYLAPLGDWLGSHK PWSPWQQSAPSCPPQAEWETFRQQRGIIVAGRITDPEQAQVVAALAEQLGWPLLADLQ SQIRFDSRNLIHMDMALNDPEFVAELGRAEVLLQFGARLVSKRLGQFIKHHSWQDYWL VDPQPARLDPDYRLRNRLLCSASAFAAAHPVTTQAPWHTLAELQHNASQQIAAACEHF SELGVCHRLNRLIEGQLFVGNSMPARLMDMLGETGKGPSRVMTNRGASGIDGLIATAY GFAQSIEQGSNEPTTLLLGDLSALHDLNSLALLSKASRPLVVILLNNDGGSIFRMLPV PTEGELLESYYRLPHGLSFEHAAAMFGLAYRAPTTLAEFERDYRAALQHGVTLIEIRV PSEQVADDLKALGAAIRGK" misc_feature complement(542192..543883) /locus_tag="B565_0486" /note="2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase; Validated; Region: PRK07449" /db_xref="CDD:180980" misc_feature complement(543374..543856) /locus_tag="B565_0486" /note="Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1- carboxylate synthase (MenD) and related proteins; Region: TPP_PYR_MenD; cd07037" /db_xref="CDD:132920" misc_feature complement(order(543503..543508,543515..543517, 543527..543529,543536..543541,543560..543562, 543617..543619,543626..543631,543635..543640, 543647..543649,543722..543739,543743..543745, 543785..543787,543797..543802,543806..543808)) /locus_tag="B565_0486" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132920" misc_feature complement(order(543503..543508,543515..543517, 543527..543529,543536..543541,543560..543562, 543617..543619,543626..543631,543635..543640, 543647..543649,543722..543739,543743..543745, 543785..543787,543797..543802,543806..543808)) /locus_tag="B565_0486" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:132920" misc_feature complement(order(543536..543541,543605..543607, 543614..543616,543626..543628,543635..543637, 543647..543649,543686..543691,543695..543703, 543707..543712,543719..543745,543785..543787, 543797..543802,543806..543808)) /locus_tag="B565_0486" /note="PYR/PP interface [polypeptide binding]; other site" /db_xref="CDD:132920" misc_feature complement(543725..543727) /locus_tag="B565_0486" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132920" misc_feature complement(542243..542770) /locus_tag="B565_0486" /note="TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD). SHCHC synthase plays a key role in the menaquinone biosynthetic pathway, converting...; Region: TPP_SHCHC_synthase; cd02009" /db_xref="CDD:48172" misc_feature complement(order(542447..542449,542453..542455, 542528..542539,542618..542620)) /locus_tag="B565_0486" /note="TPP-binding site; other site" /db_xref="CDD:48172" gene complement(543976..545298) /locus_tag="B565_0487" /db_xref="GeneID:10486404" CDS complement(543976..545298) /locus_tag="B565_0487" /codon_start=1 /transl_table=11 /product="Menaquinone-specific isochorismate synthase" /protein_id="YP_004391139.1" /db_xref="GI:330828187" /db_xref="GeneID:10486404" /translation="MLAQTHIKQQLDALRHSNVSGFVRLRVAIEIRSFLGWLAAQTLY PRIYWQARGEARPEYVALGAIHELTEPHAIKQVCTNTANQHHDNSPRYYGGLAFDPAQ SGWQGFGPCRFVLPRIELVRRGECVSLCLNLWLDENNLEAELQAAEAALDALRPEAPL PALQKQPWQRQDCPGPAQWQTLVERVTAPDFQAHTPKVVLSRESLLTSPNHDADINPW AMLDQWARHAQDCFHFGFQFSPEQAFIACSPERLYRREDRHLFTEALAGTIRRSGDEE VDAQLAAELLADSKNRLENRLVHADILSRLAPLTHDATLTEPRILKLRLLQHLKCDIE AELKLGVCDWQLLDALHPTPAVGGAPREAALAFIREFEPYDRGWYAGACGMLSRETSE FSVAIRSARIQPGSVTLFAGAGIVAGSEPVAEWAELDNKIANVLSLLG" misc_feature complement(543979..545223) /locus_tag="B565_0487" /note="Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]; Region: MenF; COG1169" /db_xref="CDD:31363" misc_feature complement(543982..545031) /locus_tag="B565_0487" /note="chorismate binding enzyme; Region: Chorismate_bind; cl10555" /db_xref="CDD:195988" gene 545489..546412 /locus_tag="B565_0488" /db_xref="GeneID:10486405" CDS 545489..546412 /locus_tag="B565_0488" /codon_start=1 /transl_table=11 /product="1,4-dihydroxy-2-naphthoate octaprenyltransferase" /protein_id="YP_004391140.1" /db_xref="GI:330828188" /db_xref="GeneID:10486405" /translation="MFGHHKMTNTFSVWLLAARLRTLPLACSSILLGSGLAASRGAFD GTIMALSLLTAILLQILSNLANDYGDAVSGADNGERIGPQRAVVSGLITKKQMCVAMG LTALAAVASGLLLLGCAFGGQWLQILAFVVLGGAAIVAAVTYTVGKTPYGYRGFGDIS VFLFFGLLGVLGSYYLFTKTLEWELLLPATACGLLATAVLNINNVRDIETDAASGKIT LAVRLGRNRAIAYHWVLLGAALLATIVFILIQPASFWPWIFLPAMKPLSDAAKTLRES YDGEVLTGSLKKTAISAFLFSLLLSIGLAFS" misc_feature 545681..546355 /locus_tag="B565_0488" /note="UbiA prenyltransferase family; Region: UbiA; cl00337" /db_xref="CDD:193776" gene 546519..546734 /locus_tag="B565_0489" /db_xref="GeneID:10486406" CDS 546519..546734 /locus_tag="B565_0489" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391141.1" /db_xref="GI:330828189" /db_xref="GeneID:10486406" /translation="MRASLKQKIIQVCQQKIARKGETVGLSFYAFFANRNDDPDLLME AATWWIQTHKLDHFEKAKKILLLVEQE" gene complement(546815..548209) /locus_tag="B565_0490" /db_xref="GeneID:10486407" CDS complement(546815..548209) /locus_tag="B565_0490" /codon_start=1 /transl_table=11 /product="Propeptide, PepSY amd peptidase" /protein_id="YP_004391142.1" /db_xref="GI:330828190" /db_xref="GeneID:10486407" /translation="MKNRDSSHYQRIWRWHFYAGLFVAPFLILLSLTGIVYLFKPQLD NLMYPELMKVATASQTLSADQLLAKAMMTMPDASLRKYLPPAAPDLSAQFIVNQGDRE LTLFLDPASSALLSTMDNKWNLQAVARSLHADLLLGTTGDRLIELAAGWGLVLLISGL YLWWPRKGPGVGGILWPRVSQRGRLWWRDLHAVIGFWGAGFLLLLLLSGMTWTGFWGD QFAAVWNRFPAAMWNEVPKSAPLARTLNQAHEQTVPWAVENTPMPSSQPVDEGHDHGA MNHGEHEGVVMASQRIPLQRVVEIAHERGVQPGYSITPPVGATGVYTIAIFADDPRND ATLHIDQYSGKVLADVRWQDYGPVAKTVESGVMLHMGKLYGWPHQLAMLLICLMVLAS AVSGLWIWWCRRPQGRLAAPPLPAKLPSMRGAIALLILLGIAFPLVGASMVAIWLLDT LLFSRRPLKVARAS" misc_feature complement(546839..548191) /locus_tag="B565_0490" /note="Uncharacterized iron-regulated membrane protein [Function unknown]; Region: PiuB; COG3182" /db_xref="CDD:32995" misc_feature complement(547163..547339) /locus_tag="B565_0490" /note="Peptidase propeptide and YPEB domain; Region: PepSY; pfam03413" /db_xref="CDD:190629" gene 548520..548885 /locus_tag="B565_0491" /db_xref="GeneID:10486408" CDS 548520..548885 /locus_tag="B565_0491" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391143.1" /db_xref="GI:330828191" /db_xref="GeneID:10486408" /translation="MLICRPSGPFNLAGAMAYEARFRHELAGLMDGPWGIVEVATEFE AAGPEVLARFRRQFGWCAESGCQFLAVVFVGGFKRYLADNIFTGLPFRAVRYFEQEAA AIQWLGEQLNTAPCEPASA" gene complement(548912..549202) /locus_tag="B565_0492" /db_xref="GeneID:10486409" CDS complement(548912..549202) /locus_tag="B565_0492" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391144.1" /db_xref="GI:330828192" /db_xref="GeneID:10486409" /translation="MTQAIQTDVSCQNCEACCCRLEVMLFTDTGVPDRYVLERDGEIP VMRRLDDGWCAALDRNTMMCRIYEVRPLICREFEMGEPDCVDERDKWFIKLD" misc_feature complement(<548936..549172) /locus_tag="B565_0492" /note="Flagellin N-methylase; Region: FliB; cl00497" /db_xref="CDD:186037" gene complement(549292..550671) /locus_tag="B565_0493" /db_xref="GeneID:10486410" CDS complement(549292..550671) /locus_tag="B565_0493" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase DbpA" /protein_id="YP_004391145.1" /db_xref="GI:330828193" /db_xref="GeneID:10486410" /translation="MNNSEFSSLNLSPALQENLTSLGYLQMTPIQAQSLPLVLDGKDL IAKAKTGSGKTAAFGLGLLAKLNVNRLEVQALVLCPTRELADQVAQEIRRLARALPNV KLVTLCGGTPTAPQSATLSFGAHIAVGTPGRILKHLEQGTLELSGLKTLVLDEADRML DMGFGEDINRVISYAPERRQTLLFSATYPEGIAQMSRGVQRNPVEVSVESLHEGSAIE QKLYEVPAGQRLDALTWLLSHYQPSSCVVFCNTKRACNDVADHLAAKGFSALALNGDL EQRERDQVLVRFANGSATILVATDVAARGLDIKELGAVINYELTYDPEVHVHRIGRTG RAGQQGLALSLYQPNEAQRVNFIEEYQQAPMPLGDLDSIGRDIKPIAPQMVTLSIDAG RKTKVRAGDILGALTGEGGIAGADVGKIQISEQYSYVAVKRSVASAALKRLQEGKIKG RSYRARKLG" misc_feature complement(549298..550671) /locus_tag="B565_0493" /note="ATP-dependent RNA helicase DbpA; Provisional; Region: PRK11776" /db_xref="CDD:183308" misc_feature complement(550051..550656) /locus_tag="B565_0493" /note="DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (...; Region: DEADc; cd00268" /db_xref="CDD:28928" misc_feature complement(550507..550521) /locus_tag="B565_0493" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28928" misc_feature complement(550201..550212) /locus_tag="B565_0493" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:28928" misc_feature complement(550111..550119) /locus_tag="B565_0493" /note="motif III; other site" /db_xref="CDD:28928" misc_feature complement(549637..550023) /locus_tag="B565_0493" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature complement(order(549769..549777,549850..549855, 549913..549924)) /locus_tag="B565_0493" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(order(549667..549669,549676..549678, 549688..549690,549751..549753)) /locus_tag="B565_0493" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(549298..549519) /locus_tag="B565_0493" /note="DbpA RNA binding domain; Region: DbpA; pfam03880" /db_xref="CDD:146487" gene 551214..552419 /locus_tag="B565_0494" /db_xref="GeneID:10486411" CDS 551214..552419 /locus_tag="B565_0494" /codon_start=1 /transl_table=11 /product="nucleoside permease NupC" /protein_id="YP_004391146.1" /db_xref="GI:330828194" /db_xref="GeneID:10486411" /translation="MEYVHFVLGLVMVLALSLLANRHNWKQIKLRYIGQLLVVELALA WFMLNSEVGLAVVGGFAAGFTKLMEFAKQGTDFVFGGLVNEGAFSFFLMVLMPIVFIS VLIGILQYIRLLPLVIRGIGTVLAKINGMGKLESFNAISSMIVGQSENFIALKNILPH LNEKQMYTLAATAMSTVSMSIVGAYMQLIEPRYVVAALVLNMFSTFVVLSLINPYEPD NSVTDIKAIAEGDEHHTPKKENFFEMLGEYIMAGFTVAVIVGAMLVGFIALIALINYL FEMAFGVNFQFVMGYLFYPVAWILGIPSGEALQAGSIMATKLVTNEFVAMMDLGKVAA ELSPRTVGILSIFMVSFANFSSIGIIAGAVKALNEEKGNMVSRFGLKLVYGSTLVSLL SAVIAGIMI" misc_feature 551283..552416 /locus_tag="B565_0494" /note="Nucleoside permease [Nucleotide transport and metabolism]; Region: NupC; COG1972" /db_xref="CDD:32155" misc_feature 551283..551462 /locus_tag="B565_0494" /note="Na+ dependent nucleoside transporter N-terminus; Region: Nucleos_tra2_N; pfam01773" /db_xref="CDD:145105" misc_feature 551484..551780 /locus_tag="B565_0494" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" misc_feature 551790..552416 /locus_tag="B565_0494" /note="Na+ dependent nucleoside transporter C-terminus; Region: Nucleos_tra2_C; pfam07662" /db_xref="CDD:191803" gene complement(552484..553017) /locus_tag="B565_0495" /db_xref="GeneID:10486412" CDS complement(552484..553017) /locus_tag="B565_0495" /codon_start=1 /transl_table=11 /product="putative membrane-bound metal-dependent hydrolase" /protein_id="YP_004391147.1" /db_xref="GI:330828195" /db_xref="GeneID:10486412" /translation="MRRHLVHAVIIMTAQGHLLFSVTCTLIAHKLQLTPALADASLWQ SIPIALASALLPDLDHPKSLLGQQLPWISKPLSRLFGHRGFTHSLLAVAAAVWGLNQS LPPDTLPMGVKDALIVGYLSHLLGDWLTPAGIPLFWPIKRRYRLPGWPLRSGGAIETG FCTLTLLVAGWWCGWRL" misc_feature complement(552505..552984) /locus_tag="B565_0495" /note="Predicted membrane-bound metal-dependent hydrolase (DUF457); Region: DUF457; cl00868" /db_xref="CDD:186230" gene complement(553110..553559) /locus_tag="B565_0496" /db_xref="GeneID:10486413" CDS complement(553110..553559) /locus_tag="B565_0496" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391148.1" /db_xref="GI:330828196" /db_xref="GeneID:10486413" /translation="MPIWVDADACPIPVKEILYRAAHRAQVVTTLVANQGLRVPPSPF IKTQQVEKGFDVADHVIAQQVQPGDLVITGDIPLASWVIDAGGEALNPRGETYTRETI KARLGMRNFMEELRSAGVQTGGPAPFNAADKQRFANALDKWLVKGKL" misc_feature complement(553122..553511) /locus_tag="B565_0496" /note="Uncharacterized BCR, YaiI/YqxD family COG1671; Region: DUF188; cl00727" /db_xref="CDD:186163" gene 553700..554665 /locus_tag="B565_0497" /db_xref="GeneID:10486414" CDS 553700..554665 /locus_tag="B565_0497" /codon_start=1 /transl_table=11 /product="transporter, CorA-like family" /protein_id="YP_004391149.1" /db_xref="GI:330828197" /db_xref="GeneID:10486414" /translation="MDRVPGEVIYALTLDGKGGMAPLTAGSEVPAAHPGWLHLDYGNP DSARWLLQTPLLSEAARESLLGQSNRPKLVRMGETVLLILRGINHNKDHRPEEMVALR IFITPDLIISSRRRPLLSEQDVFNQLKLGGGADTPADWLVEICDALTDRAGEFVEELH DKILDLEEMVLMRDMPANGRLALIRKQLIMIRRYLSPQRDLVARLANEKISWLDEDDR RRLLDIADRLRRWLDDLDAGVARTAVLADEINNLMAEATNRRAYQMSVMALLFLPASF LTGLFGINLGGIPGAENPTAFWVFCGSLVALASGLAIWLKHRRWW" misc_feature 553700..554662 /locus_tag="B565_0497" /note="magnesium/nickel/cobalt transporter CorA; Provisional; Region: PRK11085; cl00459" /db_xref="CDD:187900" misc_feature 553805..554647 /locus_tag="B565_0497" /note="CorA-like Mg2+ transporter protein; Region: CorA; pfam01544" /db_xref="CDD:144948" gene 554679..555191 /locus_tag="B565_0498" /db_xref="GeneID:10486415" CDS 554679..555191 /locus_tag="B565_0498" /codon_start=1 /transl_table=11 /product="Small-conductance mechanosensitive channel" /protein_id="YP_004391150.1" /db_xref="GI:330828198" /db_xref="GeneID:10486415" /translation="MWQSIGLTLLLLLGHTLIRRLIHKSLLALGQSRQVSENRVLYVA HVFHFLLGCATLLVLAGVWGLDFSRLVVLASSFFAVLGVAMVAQWSILSNITASITIF FAFPYKIGDRIRILDKDDSVTGVITEIGLFYVRVRDDNGDLVTYPANLILQKPVRKLE GKVAEPLQPE" misc_feature 554814..>555146 /locus_tag="B565_0498" /note="Mechanosensitive ion channel; Region: MS_channel; pfam00924" /db_xref="CDD:144501" gene complement(555253..555501) /locus_tag="B565_0499" /db_xref="GeneID:10486416" CDS complement(555253..555501) /locus_tag="B565_0499" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391151.1" /db_xref="GI:330828199" /db_xref="GeneID:10486416" /translation="MTVSELRKLYQQQILQEAEILHDVAIPGWIIEFRGKDGALYELT DTLGCPVSFGTVEQAREHLHQVADCPVQVEHLYRFFER" gene complement(555566..556138) /locus_tag="B565_0500" /db_xref="GeneID:10486417" CDS complement(555566..556138) /locus_tag="B565_0500" /codon_start=1 /transl_table=11 /product="DnaJ family molecular chaperone" /protein_id="YP_004391152.1" /db_xref="GI:330828200" /db_xref="GeneID:10486417" /translation="MSEATHNPLIAPLLALLQQAAGSYKVHELMADLRQQGAIPPLAD DEQLQLFRVNFLIMNALYQLQAELWQEGWWLVISTLDIRLEPLAGNQEVNHGFAVGEN LRSYYLDWQVFWQTDRAEVETLLNRFWRTYDGEGHKEEALALFQLDEGASQEAIRRRW RERALQHHPDRGGNAETFVRIRWAWEVLRG" misc_feature complement(555743..556075) /locus_tag="B565_0500" /note="DNA-J related protein; Region: DNAJ_related; pfam12339" /db_xref="CDD:152774" misc_feature complement(555575..555712) /locus_tag="B565_0500" /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of...; Region: DnaJ; cd06257" /db_xref="CDD:99751" misc_feature complement(order(555590..555595,555602..555607, 555614..555616,555629..555637)) /locus_tag="B565_0500" /note="HSP70 interaction site [polypeptide binding]; other site" /db_xref="CDD:99751" gene complement(556135..557922) /locus_tag="B565_0501" /db_xref="GeneID:10486418" CDS complement(556135..557922) /locus_tag="B565_0501" /codon_start=1 /transl_table=11 /product="sodium/hydrogen exchanger family protein" /protein_id="YP_004391153.1" /db_xref="GI:330828201" /db_xref="GeneID:10486418" /translation="MIALSLAGIALVSVLAQWLAWSLRVPAILFLLLTGLTLGPVSGL LDPDALLGDLLFPLVSLSVAIILFEGALTLHLAELKGIGKVVRNLCSTGMLVSFAVIG SAGYFLLGLDWRVATMLGAVLVVTGPTVIAPMLNVIRPTREVDRILRWEGIVIDPIGA LFAVLVFEAVRLGSQGDLISHTLLALGKTVLVGSLIGVAAGWLTTLLIRKDWLPVSLH KFGVLALVLVTFSLSNWLSHESGLLAVTVFGIWLANQEGLDLEEVLAFKEDLAVILIS SLFILLAARLDLAQLWQLGPMVLALLCVVQFVARPLCILVSTWGSDLSWRARALLSWI APRGIVAAAVSASFAISLHQAEIPDADKLVPLVFAVIISTVVLQSLTSAPLASLLKMR QSAPNTWLIIGANSVARAIGKALADLGVPVQLCDPAWEFCKQARMSNLPCYFGNPQSE HAELHLPLTSISTVLALSPNRHNNALGVLHFAHLYGEEQVYSLRSSEQHGKANRESAT FRARQNLFGPDINYAKLSGLLSRGGQIKATRLSEAFDWAQYQAANPGAIPLFVMDSKG KPHIVTGPVTPQAGELLIALQPPREQGAE" misc_feature complement(556687..557922) /locus_tag="B565_0501" /note="NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]; Region: NhaP; COG0025" /db_xref="CDD:30375" misc_feature complement(<557188..557745) /locus_tag="B565_0501" /note="Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]; Region: KefB; cl10482" /db_xref="CDD:164194" gene complement(558113..558634) /locus_tag="B565_0502" /db_xref="GeneID:10486419" CDS complement(558113..558634) /locus_tag="B565_0502" /codon_start=1 /transl_table=11 /product="mannitol operon repressor" /protein_id="YP_004391154.1" /db_xref="GI:330828202" /db_xref="GeneID:10486419" /translation="MTTHQEDEVLERLNEQDGPRGFFLEAVTILEEAVDSLMRRAFRQ EEYAVKYAIEPLLNQSGPLGQLEVRLKLIFALGLISLERYQDLEAYLKIRDFLVRDPK DYRFSDKPIRDLLDRLHGVNQGGMMKLEPPASEEDWAFYQMQLNRLDQMVRSALVLAL ADCVGELHKESPI" misc_feature complement(558116..558628) /locus_tag="B565_0502" /note="Mannitol repressor; Region: MtlR; cl11450" /db_xref="CDD:187046" gene complement(558757..559902) /locus_tag="B565_0503" /db_xref="GeneID:10486420" CDS complement(558757..559902) /locus_tag="B565_0503" /codon_start=1 /transl_table=11 /product="mannitol dehydrogenase domain-containing protein" /protein_id="YP_004391155.1" /db_xref="GI:330828203" /db_xref="GeneID:10486420" /translation="MKTLHFGAGNIGRGFIGKVLADASHQVTFADVNDTLIDQLNHRQ EYKVHVVGADQKLDVVRNVAAVSSAGHEVIARIITADLVTTAVGPNILDKIASTLAKG LQARFDAGNLTPLNVIACENMVRGTSHLKREVLKYLPVAYHATLESCIGFVDSAVDRI VPPAAAANDDPLEVTVESFSEWIVDQTQFKGELPQVAGMEPTDNLMAFVERKLFTLNT GHIVTAYLGKLRGYRTVREAIEDPVIRSKVRRAMEESGAVLVKRYGFDPRLHAAYIEK ILARFANPYLVDEIDRVGRQPLRKLAAGDRLVKPLLGTLEYSLPSDQLQEGIAAALHY RNADDPQAVELQQLLAELGPAKALARVTGLDAESEIVHTIVARYETL" misc_feature complement(558760..559902) /locus_tag="B565_0503" /note="mannitol-1-phosphate 5-dehydrogenase; Provisional; Region: PRK02318" /db_xref="CDD:179414" misc_feature complement(559534..559902) /locus_tag="B565_0503" /note="Mannitol dehydrogenase Rossmann domain; Region: Mannitol_dh; pfam01232" /db_xref="CDD:144722" misc_feature complement(558790..559455) /locus_tag="B565_0503" /note="Mannitol dehydrogenase C-terminal domain; Region: Mannitol_dh_C; pfam08125" /db_xref="CDD:149275" gene complement(559940..561805) /locus_tag="B565_0504" /db_xref="GeneID:10486421" CDS complement(559940..561805) /locus_tag="B565_0504" /codon_start=1 /transl_table=11 /product="phosphotransferase system mannitol-specific" /protein_id="YP_004391156.1" /db_xref="GI:330828204" /db_xref="GeneID:10486421" /translation="MVMPNIGAFIAWGFITALFIPTGWLPNETLAKLVGPMITYLLPL LIGYTGGKLMGGERGGVVGAITTMGVIVGTDIPMFMGAMMVGPLGGWAIKRFDKAMDG RVKSGFEMLVNNFSAGLIGMLLAILAFFVIGPFVKVLSGVLAGGVGFLVDNHMLPLTS IFVEPAKILFLNNAINHGIFSPLGIQQATEHGSSIFFLIEANPGPGMGVLLAYMVFGR GAAKQSAAGASIIHFFGGIHEIYFPYVLMNPRLILAVIAGGMTGVFTLTLFNAGLVSP ASPGSIFAVLLMTPKASLIGVALSIISATLVSFLVAAVFVRAQQPEADEADALGEATR KMKAMKGGKPETAAAKKPGGELMAVRNIVVACDAGMGSSAMGAGMLRKRVQAAGLDIS ITNRAIDQLDDQVDWVITHKDLTERARRHAPHAHHISLTNFLDNGLYQELVQSLTQAA NDDVANPQLLVAANDDSYEPQAAEVFTLSRHDVHLGLKADSKEAAILTAGRLLAERGY VAPDYVNAMLEREQLVSTYLGESIAVPHGTIAAKEFVKRTGIVICQYPAGVAFGEAAD EVARLVIGIAARNDEHMQVITRLTNALDEPGLIDRLASTTDPQAFLDLLGAEQAA" misc_feature complement(559946..561805) /locus_tag="B565_0504" /note="PTS system mannitol-specific transporter subunit IICBA; Provisional; Region: PRK15083" /db_xref="CDD:185041" misc_feature complement(560828..561805) /locus_tag="B565_0504" /note="Phosphotransferase system, EIIC; Region: PTS_EIIC; cl00557" /db_xref="CDD:186079" misc_feature complement(560468..560728) /locus_tag="B565_0504" /note="PTS_IIB_mannitol: subunit IIB of enzyme II (EII) of the mannitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a mannitol-specific permease with two cytoplasmic domains (IIA and IIB) and a...; Region: PTS_IIB_mannitol; cd05567" /db_xref="CDD:99909" misc_feature complement(560687..560713) /locus_tag="B565_0504" /note="active site" /db_xref="CDD:99909" misc_feature complement(order(560687..560695,560699..560710)) /locus_tag="B565_0504" /note="P-loop; other site" /db_xref="CDD:99909" misc_feature complement(560708..560710) /locus_tag="B565_0504" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99909" misc_feature complement(559961..560374) /locus_tag="B565_0504" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cd00211" /db_xref="CDD:29266" misc_feature complement(order(560198..560200,560246..560248)) /locus_tag="B565_0504" /note="active site" /db_xref="CDD:29266" misc_feature complement(560198..560200) /locus_tag="B565_0504" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29266" gene complement(562490..563413) /locus_tag="B565_0505" /db_xref="GeneID:10486422" CDS complement(562490..563413) /locus_tag="B565_0505" /codon_start=1 /transl_table=11 /product="lipid A biosynthesis lauroyl acyltransferase" /protein_id="YP_004391157.1" /db_xref="GI:330828205" /db_xref="GeneID:10486422" /translation="MAHDNAPRLEPRLFHPRYWASWFGLGLLWLLTLLPWRSQMWLGR QLGRLAARILKSRVKIARRNLELAMPELTRDEREKLLKANFESVGCAVFEVGIAWFWP DWRMRNLMKVEGEEHVIAAMEKGQGMLLLSCHFLTLELNARCFGLVRPGVGVYRPNTN PVLEYAQYHGRCASNKYLVDRMDVKGMIKALRNGDALWYAPDHDYGSHASVFVPYFAV EQAATITGTATLARVKNTVTLPCYNIRTSEGYTLHIGAPLADYPSGDDMIDAARANRE IEAAVRKAPEQYMWLHRRFKTRPSPEDAGFY" misc_feature complement(562526..563095) /locus_tag="B565_0505" /note="Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like; Region: LPLAT_LABLAT-like; cd07984" /db_xref="CDD:153246" misc_feature complement(order(562799..562807,562940..562951, 562997..562999,563003..563005,563012..563014)) /locus_tag="B565_0505" /note="putative acyl-acceptor binding pocket; other site" /db_xref="CDD:153246" gene 563618..565045 /locus_tag="B565_0506" /db_xref="GeneID:10486423" CDS 563618..565045 /locus_tag="B565_0506" /codon_start=1 /transl_table=11 /product="D-alpha,beta-D-heptose 7-phosphate 1-kinase /D-beta-D-heptose 1-phosphate adenylyltransferase" /protein_id="YP_004391158.1" /db_xref="GI:330828206" /db_xref="GeneID:10486423" /translation="MKITLPDFEKARVLVVGDVMLDRYWHGPTGRISPEAPVPVVKVE HIEERPGGAANVALNSAALGAHAVLLGLTGQDEAADALAGQMAGVKVACDFVRLADFP TITKLRVLSRNQQLLRLDFEEPFHSVDATLLMSKVEQALPNSDVMILSDYGKGALNDV PGMIQRARAAGIPVLVDPKGTDFEKYRGATLLTPNMSEFEAVVGKVKSEEELVAKGLD LVKRFELDALLVTRSENGMTLIREGQPELHLPAQAHEVYDVTGAGDTVISTLATSLAA GKSLDEACALANTAAGIVVGKLGTSTVSPVELANALYTEQETGFGVMSEAQLKVAVRA ARLRGEKVVMTNGCFDILHAGHVSYLANAGKLGDRLIVAVNTDESVRRLKGPGRPVNP TERRMAVLAALGAVDWVVPFGEDTPQRLIAEILPDLLVKGGDYKPEDIAGYAEVTANG GEVRVLNFEDGCSTTDIIKTIRERG" misc_feature 563618..565036 /locus_tag="B565_0506" /note="bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional; Region: PRK11316" /db_xref="CDD:183085" misc_feature 563651..564541 /locus_tag="B565_0506" /note="RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer...; Region: RfaE_like; cd01172" /db_xref="CDD:29356" misc_feature order(563669..563671,563675..563677,563768..563773, 563780..563782,563837..563839,563843..563845, 564398..564400,564404..564409) /locus_tag="B565_0506" /note="putative ribose interaction site [chemical binding]; other site" /db_xref="CDD:29356" misc_feature order(564200..564202,564209..564211,564308..564310, 564314..564316,564371..564373,564377..564379, 564482..564484,564488..564490,564500..564502) /locus_tag="B565_0506" /note="putative ADP binding site [chemical binding]; other site" /db_xref="CDD:29356" misc_feature 564629..565033 /locus_tag="B565_0506" /note="nucleotidyl transferase superfamily; Region: nt_trans; cl00015" /db_xref="CDD:193613" misc_feature order(564674..564685,565004..565015) /locus_tag="B565_0506" /note="active site" /db_xref="CDD:173912" misc_feature order(564674..564676,564683..564685,565007..565009) /locus_tag="B565_0506" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:173912" misc_feature 564674..564685 /locus_tag="B565_0506" /note="HIGH motif; other site" /db_xref="CDD:173912" misc_feature 565004..565015 /locus_tag="B565_0506" /note="KMSKS motif; other site" /db_xref="CDD:173912" gene complement(565162..566484) /locus_tag="B565_0507" /db_xref="GeneID:10486424" CDS complement(565162..566484) /locus_tag="B565_0507" /codon_start=1 /transl_table=11 /product="HAS ABC exporter outer membrane component" /protein_id="YP_004391159.1" /db_xref="GI:330828207" /db_xref="GeneID:10486424" /translation="MKRTLLSVMVLLGVSAGAHAENLLDIYQQAQIKDPQLLQSKAVR DQAFEKINESRAPLLPQIDLGAGLNYLQNKNDTQSNTNAKGEVTLSQSLYRRSNWVNL DISEKQATQSDVAYNLEIQNLMVRTAKAYFDVLKAMDTLEFVRANKVAVERQLEQTQQ RFEVGLTAITDVHEAEASRDQALADEINAENSLDNSYETLRELTGIDHRNLDVLNTDR FSPQKTAFGSDKWLELALDKNLQLHSARISKDIAKEQIDLAKTGHEPTLDLGAGLQTS NTDYKLDNIQSGGNDNQANIGLTFKLPIYSGGATSSKVKQAQYNYVAASELLEKNFRS VQSTVRSSYNNVNASIGSVRAYSQSVVSADSALKATEAGYEVGTRTIVDVLDSTRKLY EAKQKLSEARYNYILNILSLKQAAGILEAQDLVEVNQGLMPATAKAKG" misc_feature complement(565180..566478) /locus_tag="B565_0507" /note="outer membrane channel protein; Reviewed; Region: tolC; PRK09465" /db_xref="CDD:181880" misc_feature complement(565870..566418) /locus_tag="B565_0507" /note="Outer membrane efflux protein; Region: OEP; pfam02321" /db_xref="CDD:190278" misc_feature complement(565234..565800) /locus_tag="B565_0507" /note="Outer membrane efflux protein; Region: OEP; pfam02321" /db_xref="CDD:190278" gene 566789..567430 /locus_tag="B565_0508" /db_xref="GeneID:10486425" CDS 566789..567430 /locus_tag="B565_0508" /codon_start=1 /transl_table=11 /product="ADP-ribose pyrophosphatase" /protein_id="YP_004391160.1" /db_xref="GI:330828208" /db_xref="GeneID:10486425" /translation="MSQQPLPQDRHYAADDVKIIEKSAGYNGFFKVNVYRLQHRLFAG GWNQPIVRELFERGHAAALLPYDPVRDQIVLVEQFRIGAMETSPTPWLLELVAGIIDE GETAEAVVRREAVEEAGIEVARCEHAISYLVSPGGSTERIEVFVGEVDASKAEGLHGL ADEGEDIRVHVVSREQAYAWLKEGRIDNAASVIALQWLALNHGELRARWLADR" misc_feature 566822..567418 /locus_tag="B565_0508" /note="ADP-ribose pyrophosphatase NudF; Provisional; Region: nudF; PRK10729" /db_xref="CDD:182682" misc_feature 566957..567391 /locus_tag="B565_0508" /note="ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as...; Region: ADPRase_NUDT5; cd03424" /db_xref="CDD:72882" misc_feature order(566957..566959,566963..566965,567017..567019, 567023..567025,567029..567031,567059..567061, 567176..567187,567191..567193,567197..567211, 567281..567286,567290..567292,567329..567334, 567353..567355,567365..567367,567374..567376, 567386..567391) /locus_tag="B565_0508" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:72882" misc_feature order(566966..566968,567026..567028,567083..567085, 567125..567127,567137..567139,567206..567208) /locus_tag="B565_0508" /note="ADP-ribose binding site [chemical binding]; other site" /db_xref="CDD:72882" misc_feature order(567026..567028,567077..567085,567125..567127, 567137..567139,567206..567208,567281..567283) /locus_tag="B565_0508" /note="active site" /db_xref="CDD:72882" misc_feature order(567080..567091,567095..567148) /locus_tag="B565_0508" /note="nudix motif; other site" /db_xref="CDD:72882" misc_feature order(567125..567127,567137..567139,567281..567283) /locus_tag="B565_0508" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:72882" gene 567432..567881 /locus_tag="B565_0509" /db_xref="GeneID:10486426" CDS 567432..567881 /locus_tag="B565_0509" /codon_start=1 /transl_table=11 /product="phosphohydrolase" /protein_id="YP_004391161.1" /db_xref="GI:330828209" /db_xref="GeneID:10486426" /translation="MALTLQQSRRYVPDLMSLQRTCEVNYMALMKLLPPDGEVGAERR YRVGNDLQFQLTIIGESRFTNQVILSQHNPELPEYLQAQIEIRLYHDVRMAEVCAAQQ ISRLQPRYDYPNKKMHQRDEKEQVNLFLAEWLKFCLRHGTSPINISS" misc_feature 567456..567872 /locus_tag="B565_0509" /note="Protein of unknown function (DUF1249); Region: DUF1249; cl01223" /db_xref="CDD:194069" gene 567940..568722 /locus_tag="B565_0510" /db_xref="GeneID:10486427" CDS 567940..568722 /locus_tag="B565_0510" /codon_start=1 /transl_table=11 /product="Icc protein" /protein_id="YP_004391162.1" /db_xref="GI:330828210" /db_xref="GeneID:10486427" /translation="MRLLQITDTHLFASAEGRLLAVRTAESLAAVLEQVQANEHPYEV ILATGDLSQDHSPESYQRFASMMAPLGRPIYWLPGNHDDSPLMTEYLHAAGISESKQL VGDHWQVILLDTQVRGKPHGMIGDHQLAALDRALRQYPDRHALITLHHQAVPVGCAWL DQHNLKNADDLFAVLARHPQQKTILFGHVHQEFDEVHRGVRLIASPSTCIQFKPLSDG FALDESGPGWRYLTLYPDGRVASEVWRLPVGQFVPDPNATGY" misc_feature 567940..568512 /locus_tag="B565_0510" /note="Calcineurin-like phosphoesterase; Region: Metallophos; pfam00149" /db_xref="CDD:189420" misc_feature 567943..568653 /locus_tag="B565_0510" /note="Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain; Region: MPP_GpdQ; cd07402" /db_xref="CDD:163645" misc_feature order(567961..567963,567967..567969,568087..568089, 568096..568098,568177..568182,568384..568386, 568501..568503,568507..568509,568567..568569) /locus_tag="B565_0510" /note="active site" /db_xref="CDD:163645" misc_feature order(567961..567963,567967..567969,568087..568089, 568177..568179,568384..568386,568501..568503, 568507..568509) /locus_tag="B565_0510" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163645" misc_feature order(568006..568008,568015..568017,568024..568029, 568036..568041,568096..568098,568105..568107, 568132..568134,568396..568398,568402..568407, 568486..568488,568492..568494,568513..568527, 568534..568542,568546..568548,568633..568635, 568642..568644,568648..568650) /locus_tag="B565_0510" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:163645" gene 568735..569322 /locus_tag="B565_0511" /db_xref="GeneID:10486428" CDS 568735..569322 /locus_tag="B565_0511" /codon_start=1 /transl_table=11 /product="esterase YqiA" /protein_id="YP_004391163.1" /db_xref="GI:330828211" /db_xref="GeneID:10486428" /translation="MKSVLLYLHGFNSSPGSAKAQQMAAWVAANRPDIEVIIPAQPNT PAAAWAAIEQTIADLQGRYGSEFKLGAVGSSLGGFMATRVSERFGCRAALINPAVRPH ELLCDYLGPQTNPYTGEQYELLPEHMDELRALAVPVTAPERLWILQQQGDEVLDYRKA LDEYRFARLSLECGGNHAFVAFERYPAQIIRFLGL" misc_feature 568741..569319 /locus_tag="B565_0511" /note="Uncharacterised protein family (UPF0227); Region: UPF0227; cl14886" /db_xref="CDD:196847" gene 569455..571365 /locus_tag="B565_0512" /db_xref="GeneID:10486429" CDS 569455..571365 /locus_tag="B565_0512" /codon_start=1 /transl_table=11 /product="DNA topoisomerase IV subunit B" /protein_id="YP_004391164.1" /db_xref="GI:330828212" /db_xref="GeneID:10486429" /translation="MSTQYNADAIEVLNGLEPVRRRPGMYTDTTRPNHLGQEVIDNSV DEALAGHARNLEVILHEDQSLEVIDDGRGMPVDIHPEEGVSGVELILCKLHAGGKFSN KNYQFSGGLHGVGISVVNALSDRVEVTVRRDGQVYDIAFERGEKVQELTITGTCGRRN TGTRVRFWPQASYFDSPKFSVTKLEHLLKAKAVLCPGLTIKFLDKNTGIKLEWCYEDG LKDYLVDAVKQFTCLPEQPFIGSFSSEQSAVDWALCWLPEGGECLAESYVNLIPTAQG GTHVNGLRQGLLDAMREFCEFRNLLPRGVKLTPEDIWDRCAYILSIKMQDPQFAGQTK ERLSSRQSSAFVSGVVKDAFSLYLNSNTELAEQIAEICISSAQRRMRAAKTVVRKKIT QGPALPGKLTDCNCADPMQGELFLVEGDSAGGSAKQARDREFQAIMPLRGKILNTWEV EAGQVLASQEVHDISVAIGLDPDSEDLSGLRYGKVCILADADSDGLHIATLLCALFVK HFRTLVEKGHVYVAMPPLYRIDIGKEVYYALDEDEKNGVLQRVEAEKKKGKVMVTRFK GLGEMNPKQLRETTMDPNTRRLVQLTMEPAGESEGDAADETLQLMDMLLAKKRASDRR EWLEEKGNLAII" misc_feature 569455..571362 /locus_tag="B565_0512" /note="DNA topoisomerase IV subunit B; Reviewed; Region: PRK05559" /db_xref="CDD:180127" misc_feature 569563..569856 /locus_tag="B565_0512" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(569566..569568,569578..569580,569587..569589, 569653..569655,569659..569661,569665..569667, 569671..569676,569791..569802,569836..569838, 569842..569844) /locus_tag="B565_0512" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 569578..569580 /locus_tag="B565_0512" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(569665..569667,569671..569673,569791..569793, 569797..569799) /locus_tag="B565_0512" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature 570103..570606 /locus_tag="B565_0512" /note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having a ribosomal S5 domain 2-like fold, of the type found in proteins of the type IIA family of DNA topoisomerases similar to the B subunits of E. coli DNA gyrase and E. coli Topoisomerase IV which are...; Region: TopoII_Trans_DNA_gyrase; cd00822" /db_xref="CDD:48467" misc_feature 570259..570261 /locus_tag="B565_0512" /note="anchoring element; other site" /db_xref="CDD:48467" misc_feature order(570430..570432,570439..570444,570448..570450, 570583..570588,570598..570600) /locus_tag="B565_0512" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48467" misc_feature order(570448..570450,570454..570456) /locus_tag="B565_0512" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:48467" misc_feature 570691..571026 /locus_tag="B565_0512" /note="Topoisomerase-primase domain. This is a nucleotidyl transferase/hydrolase domain found in type IA, type IIA and type IIB topoisomerases, bacterial DnaG-type primases, small primase-like proteins from bacteria and archaea, OLD family nucleases from...; Region: TOPRIM; cl00718" /db_xref="CDD:193916" misc_feature order(570706..570711,570718..570720,570922..570924, 570928..570930,570934..570936) /locus_tag="B565_0512" /note="active site" /db_xref="CDD:173773" misc_feature order(570706..570708,570922..570924) /locus_tag="B565_0512" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173773" misc_feature 571117..571338 /locus_tag="B565_0512" /note="DNA gyrase B subunit, carboxyl terminus; Region: DNA_gyraseB_C; pfam00986" /db_xref="CDD:189792" gene 571437..573713 /locus_tag="B565_0513" /db_xref="GeneID:10486430" CDS 571437..573713 /locus_tag="B565_0513" /codon_start=1 /transl_table=11 /product="Topoisomerase IV subunit A" /protein_id="YP_004391165.1" /db_xref="GI:330828213" /db_xref="GeneID:10486430" /translation="MSDAIELSLDGVERQPMRTFTEQAYLNYSMYVIMDRALPHIGDG LKPVQRRIIYAMSELGLSALSKHKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSY RYPLVDGQGNWGAPDDPKSFAAMRYTEARLSRFSELLLSELGQGTVEWTPNFDGTMKE PVVLPARLPHILLNGVTGIAVGMATDIPPHNAREVAYACAELLDNPNAGLDVLMQHIQ GPDYPTNAEIITPRDDIRKIYETGKGSIKQRAVWSEEDGDIVITALPHQASGAKIMEQ IAAQMVAKKLPMVTDLRDESDHENPTRLVIVPRSNRVDVEGLMAHLFATTDLEKNYRV NLNILGLDNRPQVKCLKTILSEWIQFRRETVRRRLQFRLDKVLARLHILEGLLIAYLN IDEVIEIIRTEDEPGKVMVERFNITETQAEAILELKLRHLAKLEEFKLRAEQNELAEE RDKLELILGSERRLNTLLKKELLADAEKYGDDRRTPLVERATAVALTEKELIPSEPVT VILSDKGWVRAAKGHDVDVAGLSYKAGDSYLAHACGRSNQQAVFLSTLGRTYALESHT LPSARSQGEPLTGRFALGAGEEVRHLVMGNEGEPYLIASDAGYGFVCTYDDLIGKNKN GKALLTVPEGGQVMAPQKIGSPETDLCMAISNEGRMLLFPLNTLPVLGKGKGNKLISI PSARVKAREEFVVMAAVIPQGQSVTLFAGKRKLTLKPSDLDYYRGERGRRGAKLPRGL QRVDRIEIEPAAGENQEG" misc_feature 571461..573674 /locus_tag="B565_0513" /note="DNA topoisomerase IV subunit A; Validated; Region: PRK05561" /db_xref="CDD:180129" misc_feature 571536..572831 /locus_tag="B565_0513" /note="DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC), bacterial DNA gyrases (A subunit, GyrA),mammalian DNA toposiomerases II. DNA topoisomerases are essential enzymes that regulate the conformational changes in...; Region: TOP4c; cd00187" /db_xref="CDD:29149" misc_feature order(571536..571619,571632..571781,571785..571790, 571794..571844,571848..571919,571926..571928) /locus_tag="B565_0513" /note="CAP-like domain; other site" /db_xref="CDD:29149" misc_feature 571815..571817 /locus_tag="B565_0513" /note="Active site [active]" /db_xref="CDD:29149" misc_feature order(572607..572615,572622..572633,572655..572660, 572700..572750) /locus_tag="B565_0513" /note="primary dimer interface [polypeptide binding]; other site" /db_xref="CDD:29149" gene 573772..574410 /locus_tag="B565_0514" /db_xref="GeneID:10486431" CDS 573772..574410 /locus_tag="B565_0514" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391166.1" /db_xref="GI:330828214" /db_xref="GeneID:10486431" /translation="MYDFIKDFSPVFLAFFGLFVPIYQAQRERRANFKKEHQIKIFEQ LLSVSNALTSTCDELSLKALIWRVNKADGHEVDLPKRMDYAMQLEHVTYLFCKELECH EILNPLLFRTTRFMIQAKLYELSREQPYLEKIDFFSKLEWVSREISCFTRDLISCLQN EIYGELFLTKVSPRETTMDSLKVIRNEPDKLYALLEYVQCETHYGKEVLKVS" gene complement(574514..575422) /locus_tag="B565_0515" /db_xref="GeneID:10486432" CDS complement(574514..575422) /locus_tag="B565_0515" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004391167.1" /db_xref="GI:330828215" /db_xref="GeneID:10486432" /translation="MRTGMELNALKIFIAVVENSSFVGASKTLQIPTSNVSRSISQLE EALNLQLIERSTRHMKLTQSGQLLYTRVKPLLESLEQTEAELTSQQIQLKGPLRICIP NEAGPKLLGTAIADFACQHPEITISCITNLSGLESLREDLDMAIIIHRGKMDDCDYIA SHLTTIPCTVVGSPSLIQKWGLPNHTSQLKTLPCITTVSALKGMPWQFTRTSSEFSTI QVNEHYRVNSGELALKAAIAGVGFAILAKVSCQEFIDNGSLVEIELELPAAPLQLFAV YANRQYLPAKTRVFIEFIRQNIISYQ" misc_feature complement(574529..575410) /locus_tag="B565_0515" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature complement(575225..575404) /locus_tag="B565_0515" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(574541..575140) /locus_tag="B565_0515" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature complement(order(574604..574606,574685..574687, 574736..574738,574925..574927,574931..574933, 574979..574981,575096..575098,575108..575110)) /locus_tag="B565_0515" /note="putative effector binding pocket; other site" /db_xref="CDD:176114" misc_feature complement(order(574709..574711,574718..574723, 574742..574756,574844..574846,575039..575053, 575057..575059,575069..575071,575078..575083, 575087..575092,575102..575107)) /locus_tag="B565_0515" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 575546..576766 /locus_tag="B565_0516" /db_xref="GeneID:10486433" CDS 575546..576766 /locus_tag="B565_0516" /codon_start=1 /transl_table=11 /product="multidrug transporter" /protein_id="YP_004391168.1" /db_xref="GI:330828216" /db_xref="GeneID:10486433" /translation="MGERTHHNRSVMNFNVVWLAALIQLVSALDFMMIMPLGPDLSRA LNISPTYIGYLGGGYALAAALSSLLCARYLDRFDRKHVALITLLGITLSTWACALAWD MESLFFTRLLAGMFAGPATSIALAIVVDATPVQQRGRAMAIVMGAFSLSAIAGVPLGL ELAMLKGWSAPFYVLGGLGLCICVVVYTRLPGMTAHLGLSQKAFSSIEMLKRPVVLNA FMAIGLAIFSTFLIVPNIAAYFQFNLDVPRGDMSQYYVMGGIFSLFSMQLGGLFIDRF GAMKVTILMGALTIAVVWDGFLHEPGLPTIVIFTLFMVVTSTRTITVAAVNSQVAAPW ERAGFMSLQNVFQHIFSGSAAVVSSMILTNVDGHLGNITLLAWLTIVLTIIQPLFLYR LLKLLRLGTPKSDV" misc_feature 575594..576700 /locus_tag="B565_0516" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature 575606..576568 /locus_tag="B565_0516" /note="Major Facilitator Superfamily; Region: MFS_1; pfam07690" /db_xref="CDD:191813" misc_feature order(575636..575638,575645..575653,575657..575662, 575711..575713,575720..575725,575732..575734, 575744..575749,575753..575758,575894..575899, 575906..575911,575918..575923,575930..575932, 575966..575971,575978..575983,575999..576001, 576221..576223,576230..576235,576242..576247, 576254..576256,576296..576298,576308..576310, 576320..576322,576329..576331,576341..576343, 576491..576496,576503..576505,576515..576520, 576527..576529,576560..576565,576572..576577, 576584..576589,576596..576598) /locus_tag="B565_0516" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene complement(576964..578451) /locus_tag="B565_0517" /db_xref="GeneID:10486434" CDS complement(576964..578451) /locus_tag="B565_0517" /codon_start=1 /transl_table=11 /product="amino acid/peptide transporter" /protein_id="YP_004391169.1" /db_xref="GI:330828217" /db_xref="GeneID:10486434" /translation="MSASNQHPTIPPGSGALFFIQTFSTLGFAVLYSTLVLYATKRLG FSESQANAMMGVFGAFNYGLHLFGGYLGGRYLSNRNLFVMGMVLQVIGCYFIAEMGIT GLYWGLAMFLTGSGLNVTCLNMMLTQRFAPDDHRRESAFLWNYAGMNLGFFIGFTVAG YFQLTEDYRTLFLFATLGNIIAIIATFACWPILADISTPLRHVKGSGFYRRMLAGIAI LAMLVPALRLLLTHASFSGSFVLILGSVVLVLLCVMTARHPDAAERSRMVAYLILALG SLIFWSLYQLAPMGLMLFSEHNINLNVFGLRVAPQWIQNINTLVIVIGGPLMALLFKR LREQGWNIDIPSQFAASLFCMGFGMLVLPLGIHLAGADGLVAFKWIAISYVLQSFGEL LISPIGYAMIGKLAPASLQGLMMGCWMMVTGVASVLAGYVSSAMPQNIGSSPVATNPG YSSVFNMLGWGSLAGGVVLLLLVPRLRQLIASKITPPPAATAIPV" misc_feature complement(577087..578451) /locus_tag="B565_0517" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cl11420" /db_xref="CDD:196224" misc_feature complement(577147..578421) /locus_tag="B565_0517" /note="amino acid/peptide transporter (Peptide:H+ symporter), bacterial; Region: yjdL_sub1_fam; TIGR00924" /db_xref="CDD:162111" gene complement(578977..579879) /locus_tag="B565_0518" /db_xref="GeneID:10486435" CDS complement(578977..579879) /locus_tag="B565_0518" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391170.1" /db_xref="GI:330828218" /db_xref="GeneID:10486435" /translation="MQLVIRDANQGPFLTQVLRFGRDNELLSQQQLAAIKGKAVLMSL KFADKYYNKYKMHLLEQAAHDVIGVVSLGLQELSARDPAKALALLQAPEGPIKPFQKG WSMLITVSPKQAGNSLYGDVDARLLDKISSPPDVEEWQGWQEYEKALTEHNKSRLMEL IDQHFFACESDHPTMEDKLAEALLYRILCGKGSGAAPLKVKQDLKRKLAREIELDESW YDTDYLAAQLALMLSALPADMAAALRQELSPGFVPNLLHTLGFVRQYQLLQKENASPE KLDNIEMRAGLKHPLLGWPLYHDF" gene complement(579891..580658) /locus_tag="B565_0519" /db_xref="GeneID:10486436" CDS complement(579891..580658) /locus_tag="B565_0519" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391171.1" /db_xref="GI:330828219" /db_xref="GeneID:10486436" /translation="MSNSLIEITAIEIKELAVIEPKQASEKFELIAKTMSDDQLAEVI ENIDIVTLTQINGQHDISFPSIISELMTPERIRDIVCQQPLYWEEAIKNNADELQQHT FDFLNYLIRTQDSEAKQREILECVAEDPAGLFYLAIPFIEFYRGDRYEEDEGYRDVLH AEEEDLEESLRYSERQQSEDVHDYALDDPRSLLMLIRELAPEVEKAIKALLRNEHSTW DGIINKFAAELVMQAKEKNKVEEDEYGDVDDMFSFLD" gene complement(580671..581213) /locus_tag="B565_0520" /db_xref="GeneID:10486437" CDS complement(580671..581213) /locus_tag="B565_0520" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391172.1" /db_xref="GI:330828220" /db_xref="GeneID:10486437" /translation="MQKRWDQARLKSLQSDASENIESYRDQDDPKGLEQFTDQMKSLL LADMSMLEFMPEYLPLALYGRVQFPAKAKSQWNKWLTSGEQPGWDEFKVSVGFNNAAL PLVKAVRAQSEDQLMEACAVLFLLDNPLPRGSHRGDDDYELRDEEDEDGEDADADYHG GSDRYGDDDGDQDMYDEVRF" gene complement(581237..581521) /locus_tag="B565_0521" /db_xref="GeneID:10486438" CDS complement(581237..581521) /locus_tag="B565_0521" /codon_start=1 /transl_table=11 /product="Heat shock protein DnaJ-like protein" /protein_id="YP_004391173.1" /db_xref="GI:330828221" /db_xref="GeneID:10486438" /translation="MNNYFRVLGVKSNASENDIKKAYRRLSNQYHPDKLHGASEEEKE QAAIKLHQVKQAYEVLSDPKQRAAFIKDFNNVIVTDPASAMQEMWDQFYP" misc_feature complement(581336..581515) /locus_tag="B565_0521" /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of...; Region: DnaJ; cd06257" /db_xref="CDD:99751" misc_feature complement(order(581357..581362,581369..581374, 581396..581398,581423..581431)) /locus_tag="B565_0521" /note="HSP70 interaction site [polypeptide binding]; other site" /db_xref="CDD:99751" gene complement(581823..582575) /locus_tag="B565_0522" /db_xref="GeneID:10486439" CDS complement(581823..582575) /locus_tag="B565_0522" /codon_start=1 /transl_table=11 /product="Short-chain dehydrogenase/reductase SDR" /protein_id="YP_004391174.1" /db_xref="GI:330828222" /db_xref="GeneID:10486439" /translation="MNERTNHTPIALVTGAAGGIGRQLCIGLAEAGYRVIATDLAPHA FDHPEIHFHPLDLRDEQAIERLFAEVHAQHGGMHLLINNGAISKFHTRFEDLSTAQFD QVMTVNVRGAMLCARAFVQANRGLPYGRIINIASTRWQQNEPGWDAYGASKGALVALT QSLANSLADHPVTVNAISPGWIQAEDYHTLTEADHRQHPSGRVGRPDDITRACLFLAD PQNDFINGANLVVDGGMSKKMIYHTSASFWKE" misc_feature complement(581871..582548) /locus_tag="B565_0522" /note="3-ketoacyl-(acyl-carrier-protein) reductase; Provisional; Region: fabG; PRK05565" /db_xref="CDD:180133" misc_feature complement(581880..582545) /locus_tag="B565_0522" /note="classical (c) SDRs; Region: SDR_c; cd05233" /db_xref="CDD:187544" misc_feature complement(order(582021..582026,582030..582041, 582117..582119,582129..582131,582168..582176, 582255..582257,582321..582329,582405..582413, 582459..582461,582516..582527,582531..582533)) /locus_tag="B565_0522" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187544" misc_feature complement(order(582117..582119,582129..582131, 582168..582170,582252..582254)) /locus_tag="B565_0522" /note="active site" /db_xref="CDD:187544" gene complement(582572..583450) /locus_tag="B565_0523" /db_xref="GeneID:10486440" CDS complement(582572..583450) /locus_tag="B565_0523" /codon_start=1 /transl_table=11 /product="6-phosphogluconate dehydrogenase NAD-binding protein" /protein_id="YP_004391175.1" /db_xref="GI:330828223" /db_xref="GeneID:10486440" /translation="MRHLSVIGLGAMGSALATTLLKAGHPVTVWNRSAAKAAPLQALG ATLAPSVGAAIAASDITLVCVDNYSVSQQLLDEARDAVAGKLLVQLSTGSPQGARALE SWSHAHGARYLDGAILCFPDQIGTSDASIICSGASAAFSEAEPVLRLLAPTLDHVAEA VGAAAAQDCAVAAYFAGGLLGALHGALICEAEGLPVAKVCAQFSELSPILGGDVAHLG KTLASGDFDHPYASLKTWSAAISRLAGHATDAGIDSRFPRFAADLFEEGVAQGFGQQE VSALIKVLRARNGAAQ" misc_feature complement(582596..583444) /locus_tag="B565_0523" /note="3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]; Region: MmsB; COG2084" /db_xref="CDD:32267" misc_feature complement(<582983..583444) /locus_tag="B565_0523" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene 583581..584405 /locus_tag="B565_0524" /db_xref="GeneID:10486441" CDS 583581..584405 /locus_tag="B565_0524" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulatory protein" /protein_id="YP_004391176.1" /db_xref="GI:330828224" /db_xref="GeneID:10486441" /translation="MDVRTLRAFVAVFEERNITAAATRLFITQPTLSTTIKTLEDELG VPLFVRQARGVEGTEAAHRLYPRAKRLIADTDSLAREFRETSPCLELTVGIEADLGDG VVGALVQGALAHEEILLTLEEGCCGDVRLGCESLRCGDELFIPLLEEEFVLVLPPDHP LTGKGALTPAVLADEPWVTCLRHDSHLRLIAILGNQAPLYPRRAGSLRLAATMVAAGA GIAWLPRSLCPPGCTVAELAASSFKRRVGLCYAPDALRSAAVTALLEQVRGMQLPV" misc_feature 583581..584384 /locus_tag="B565_0524" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature 583590..583766 /locus_tag="B565_0524" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature <584052..584381 /locus_tag="B565_0524" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cd05466" /db_xref="CDD:176102" gene complement(584482..584997) /locus_tag="B565_0525" /db_xref="GeneID:10486442" CDS complement(584482..584997) /locus_tag="B565_0525" /codon_start=1 /transl_table=11 /product="Copper-sensitivity suppressor D protein" /protein_id="YP_004391177.1" /db_xref="GI:330828225" /db_xref="GeneID:10486442" /translation="MTTNPQPRWRRWGKEALWLLLIALVISTLLDLWRSPTLPEGAMS APVTLQDGTSTDLATLSRGKPLLVYYWASWCGVCRFTTPAVQQLWQEGENVLTVALRS GNSEQLAKGMSKKGLTFPTHNDESGALAAKWQVGVTPTFLVIRDGTLVSSTTGWSSKW GLQLRLWWASL" misc_feature complement(584497..584862) /locus_tag="B565_0525" /note="TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif...; Region: TlpA_like_ScsD_MtbDsbE; cd03011" /db_xref="CDD:48560" misc_feature complement(order(584764..584766,584773..584775)) /locus_tag="B565_0525" /note="catalytic residues [active]" /db_xref="CDD:48560" gene complement(585001..585744) /locus_tag="B565_0526" /db_xref="GeneID:10486443" CDS complement(585001..585744) /locus_tag="B565_0526" /codon_start=1 /transl_table=11 /product="secreted protein, suppressor for copper-sensitivity C" /protein_id="YP_004391178.1" /db_xref="GI:330828226" /db_xref="GeneID:10486443" /translation="MKPTLSALTLLASLSATLLAPALHAAPFTPEQEARIKELIRETL IANPKILDEAAESWEKQNAAAQEAQLGNFIKGNKDVLFNSATSPRLGAKNPKLTLVLF TDYNCPYCKQFDPQLTKLLKAYPDDLGLVIKLLPFKGQTSAKAAQYSLTLWQQDPARF LTLHDKLMSKQGMLTEADINKALAATGNTALKPAAKATEELRNSLRIGTILGVQGTPA TLIGNQLVPGAIPYEELEQLVKAELAKQG" misc_feature complement(<585355..585615) /locus_tag="B565_0526" /note="Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; Region: Thioredoxin_like; cl00388" /db_xref="CDD:193797" misc_feature complement(585025..585474) /locus_tag="B565_0526" /note="DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a...; Region: DsbA_Com1_like; cd03023" /db_xref="CDD:48572" misc_feature complement(585025..585453) /locus_tag="B565_0526" /note="DSBA-like thioredoxin domain; Region: DSBA; pfam01323" /db_xref="CDD:189942" misc_feature complement(order(585415..585417,585424..585426)) /locus_tag="B565_0526" /note="catalytic residues [active]" /db_xref="CDD:48572" gene complement(585754..587808) /locus_tag="B565_0527" /db_xref="GeneID:10486444" CDS complement(585754..587808) /locus_tag="B565_0527" /codon_start=1 /transl_table=11 /product="membrane protein, suppressor for copper-sensitivity B" /protein_id="YP_004391179.1" /db_xref="GI:330828227" /db_xref="GeneID:10486444" /translation="MSNLFKAALLLGGLLWQSMGLASDTGWLTSPQNDHARVRLQADR STADQTRILLDVELESGWKTYWHSPGEGGIAPQILWDEPVGDFQWRWPVPRHFEVAGL STQGYQGDVTFPLSLNYPTGQPLKGTLRLSTCSNVCILTDFPFTLTVDGQAPADFDFA WAKAMSTLPQQLPAETRVELGYQHNQLQLRAERAEGWQSPALFIDALEGAEFGKPALE VEGNTLIARVPVSDGWQGDAPDLRGQSLGLLLTSGEQAWQGKGTIGAPLALPNQSHSL FWLLGAALLGGLILNLMPCVLPVLALKLGTVLQHQDREQGTVRKQFLAASAGIIASFW VLAAMSSLLRAPGFGMSGAVGWGIQFQSASFIGLMVLVTLLFCANLLGLFEIRLPSAL STRLATSGGNGLGGHFLQGSFATLLATPCSAPFLGTAVAFALAAPLGQLWLIFTALGI GMSLPWLLVAALPRLALWLPKPGRWMNHLRILLGLMMLGSSLWLTSLLDNHLGSYATG WLMVAMLLALLTGIVWRYGMRGFTLAIALTALIGSPLLLSGAFSAQGSASVDKVVWQP LSERAIADALAQNKRVFIDVTADWCVTCKANKYNVLLRDEVQLVLSAPDVVALRGDWS KPSDTIAAFLRKRGAAAVPFNQIYGPELPQGVTLSPLLDKDDLLTTLHKAGLLQAGTT RF" misc_feature complement(587017..587808) /locus_tag="B565_0527" /note="Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]; Region: COG4233" /db_xref="CDD:33958" misc_feature complement(586366..586929) /locus_tag="B565_0527" /note="Cytochrome C biogenesis protein transmembrane region; Region: DsbD; cl00515" /db_xref="CDD:153822" misc_feature complement(<585859..586104) /locus_tag="B565_0527" /note="DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD...; Region: DsbDgamma; cd02953" /db_xref="CDD:48502" misc_feature complement(order(585880..585888,586009..586014, 586024..586026,586030..586032,586036..586044)) /locus_tag="B565_0527" /note="DsbD alpha interface [polypeptide binding]; other site" /db_xref="CDD:48502" misc_feature complement(order(586027..586029,586036..586038)) /locus_tag="B565_0527" /note="catalytic residues [active]" /db_xref="CDD:48502" gene complement(587861..588238) /locus_tag="B565_0528" /db_xref="GeneID:10486445" CDS complement(587861..588238) /locus_tag="B565_0528" /codon_start=1 /transl_table=11 /product="membrane protein, suppressor for copper-sensitivity A" /protein_id="YP_004391180.1" /db_xref="GI:330828228" /db_xref="GeneID:10486445" /translation="MMLQQRVAKHLLLLVCLLVLNCAAQPLARLALLDHALSCQALPV PGSATDQEDAKPASPQPTSCQLNGKWLSAATLLCVEQLFFAVAVLIALLAPLWRYTPP LPPPRVISPPERRLHLTLCVWRE" gene 588424..589152 /locus_tag="B565_0529" /db_xref="GeneID:10486446" CDS 588424..589152 /locus_tag="B565_0529" /codon_start=1 /transl_table=11 /product="1-acyl-sn-glycerol-3-phosphate acyltransferase" /protein_id="YP_004391181.1" /db_xref="GI:330828229" /db_xref="GeneID:10486446" /translation="MLKIARVLLLGLLLIFWFLFGLLLCLVRPRHPNNVYVFARMYHA VCPLIGLRVKVTVADEVKSVGPAVYVCNHQSNFDIFTVTGAVQPGVVAVGKKSLLWLP LFGLIFWLSGNVLIDRSNRSRAIGTIGQVVDRIKNRGTSIWMFPEGTRSQGRGLLPFK AGAFHTAVQAEVPVVPIVCSSYFGQVDLNRWDNGEVLVEVMAPVCSKEHGASGIRDLS DTCRARMEAKLTELDSKLGHSHAA" misc_feature 588550..589035 /locus_tag="B565_0529" /note="Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like; Region: LPLAT_AGPAT-like; cd07989" /db_xref="CDD:153251" misc_feature order(588640..588642,588649..588651,588655..588657, 588703..588714,588865..588873) /locus_tag="B565_0529" /note="putative acyl-acceptor binding pocket; other site" /db_xref="CDD:153251" gene 589201..590025 /locus_tag="B565_0530" /db_xref="GeneID:10486447" CDS 589201..590025 /locus_tag="B565_0530" /codon_start=1 /transl_table=11 /product="phage shock protein A" /protein_id="YP_004391182.1" /db_xref="GI:330828230" /db_xref="GeneID:10486447" /translation="MVKITTWLAILTNNLLLNFLGKFPSICKTTIIFLGTALVMLWEE IAIPSIRSQTMSVFSRLTDVINANLHSLLDKSEEPEKMLRLMIEEMELVQVEMRTQAA RVIAEQKQLERHQQALQAQILEWSAKAELAIQKGREDLARAALTEKLAEVKKCEQLEQ DKARVAEVLAQLTADSERLAAKLTEAREKQKLLTLREQTAHSRIRARAQVDNQRMHEL MARFDGFQGRVDQLEAQLEAATLGQNPSLEAQFRELELNDEIERELARLKGQKAEV" misc_feature 589363..590019 /locus_tag="B565_0530" /note="phage shock protein A; Region: phageshock_pspA; TIGR02977" /db_xref="CDD:132022" misc_feature 589363..590004 /locus_tag="B565_0530" /note="phage shock protein PspA; Provisional; Region: PRK10698" /db_xref="CDD:182657" gene 590028..590234 /locus_tag="B565_0531" /db_xref="GeneID:10486448" CDS 590028..590234 /locus_tag="B565_0531" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391183.1" /db_xref="GI:330828231" /db_xref="GeneID:10486448" /translation="MSPWPKDLVHRKLSGVCAGIARRLGVSRVTVRVVALLALILMPP LALAAYLLAVLVMPPRYELKRWLD" gene 590283..590501 /locus_tag="B565_0532" /db_xref="GeneID:10486449" CDS 590283..590501 /locus_tag="B565_0532" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391184.1" /db_xref="GI:330828232" /db_xref="GeneID:10486449" /translation="MLEFFILLVVLLVMALTGFTLVAMLLVSGLFVLLGALGGMLALI IKLAPWLLLVLAVCWLISNRSKRSNTYL" gene complement(590592..590936) /locus_tag="B565_0533" /db_xref="GeneID:10486450" CDS complement(590592..590936) /locus_tag="B565_0533" /codon_start=1 /transl_table=11 /product="GIY-YIG nuclease superfamily protein" /protein_id="YP_004391185.1" /db_xref="GI:330828233" /db_xref="GeneID:10486450" /translation="MREPATTTPAQQPSAPSRWSVYMVRTATGLLYTGISTDPLRRLR QHQSGKGARALRGKGPLTLAWQQEVGEKGAALRIEYRLKQQPKSFKEQLIHSPALWQS WSHQWLPAATQP" misc_feature complement(590646..590897) /locus_tag="B565_0533" /note="GIY-YIG catalytic domain; Region: GIY-YIG; cl01061" /db_xref="CDD:194023" gene 590981..591715 /locus_tag="B565_0534" /db_xref="GeneID:10486451" CDS 590981..591715 /locus_tag="B565_0534" /codon_start=1 /transl_table=11 /product="ABC transporter periplasmic binding protein" /protein_id="YP_004391186.1" /db_xref="GI:330828234" /db_xref="GeneID:10486451" /translation="MRVWFWLWLLLSVPALGETIRLYDYHQHPPFNTGVDAGLSRELV KYLNEKLGGEPRIELWLVNRARLALEMADPDFDGLVVWVNPAWVGDPHRERYLWTFPV MRDTNELVSNIDNPVTYRGPDSLKGLVFGGVEGYRYQGIDDAASRGELVRQDAKKVKT NLELLVRGRIDVTLVSGSSLGFFIDAQHYQGKLFISPFPQSSYTRHILLPKSRPELHA TLNDIAEQMDRDPRWHKVLESYRGTP" misc_feature 591065..591709 /locus_tag="B565_0534" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature 591077..591700 /locus_tag="B565_0534" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature order(591170..591172,591254..591256,591389..591391, 591506..591508) /locus_tag="B565_0534" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(591467..591469,591485..591487) /locus_tag="B565_0534" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 591581..591598 /locus_tag="B565_0534" /note="hinge residues; other site" /db_xref="CDD:29040" gene complement(591697..592587) /locus_tag="B565_0535" /db_xref="GeneID:10486452" CDS complement(591697..592587) /locus_tag="B565_0535" /codon_start=1 /transl_table=11 /product="RarD protein" /protein_id="YP_004391187.1" /db_xref="GI:330828235" /db_xref="GeneID:10486452" /translation="MKNWLGTGTATLSFILWGMLPLYYQFMPEVNMWELISHRVLWSV VLLGALFLLLGHQVPWARLRSEPRQLGLILLAGPVMSISWCMFTWCLTTGQVLTTSLA FFMTPLFNIVFAVIFLKERLTPQKHLAVALALAGLAYMLFCYGQLPWFSLIMGANFAC YGLIKKKIHYDTGTSLYLEAMVQLPVALIIIGTLAWYGEGAFVNGDLADKLLLMGSAP ATLLPVGLFCYAVARTRMSTVGLLQYIEPSLAFLLAIYWFGEAPDPIKAVGFAFVWAG LLVSLLPLHRLKRRPQGVPR" misc_feature complement(591718..592572) /locus_tag="B565_0535" /note="Predicted permeases [General function prediction only]; Region: RarD; COG2962" /db_xref="CDD:32782" misc_feature complement(591742..>592029) /locus_tag="B565_0535" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene 592687..593274 /locus_tag="B565_0536" /db_xref="GeneID:10486453" CDS 592687..593274 /locus_tag="B565_0536" /codon_start=1 /transl_table=11 /product="Uracil-DNA glycosylase superfamily" /protein_id="YP_004391188.1" /db_xref="GI:330828236" /db_xref="GeneID:10486453" /translation="MQRIDKLFEQIRACRLCEAHLPLGPRPVIRGAESARLLIIGQAP GTRVHASGIPWDDPSGDRLRQWLGVDKATFYDESRIAIMPMGLCYPGRGKSGDLPPRP ECAPTWHDKVLMLLPNIELTLLIGQYAQAYYLRGAAKGSLTDTVRSWADYGPGWLPLP HPSPRNTLWLRKNPWFEDEIVPHLQQRVAPLLGRP" misc_feature 592687..593253 /locus_tag="B565_0536" /note="Uracil DNA glycosylase superfamily; Region: UDG; cl00483" /db_xref="CDD:193838" gene complement(593278..594135) /locus_tag="B565_0537" /db_xref="GeneID:10486454" CDS complement(593278..594135) /locus_tag="B565_0537" /codon_start=1 /transl_table=11 /product="drug/metabolite family transporter" /protein_id="YP_004391189.1" /db_xref="GI:330828237" /db_xref="GeneID:10486454" /translation="MNAVGIGILYLVLGNMVAVFSDALVKVLEPDQPIFQFVFFRQLS AAILLMPLLLWSWRRNPPVAIKWHLLRAHIWAVGVCLMVVALTRLPLATANALFYAAP LMMVPLAVWMAGEAISRQKVLTAVIGFIGVLIVLRPTEVNWAALAALGVALSMALNNL LIKRIPLKQPIAQTLFFTNVLSMPFILALAWWEGGDWQWQMWWPAFGSSALIMVYAGL CVVAYRKAEASKIASAEYTGLLMAVAIGVWLFDEQPGLPLLLGCICIVLPLIAMARSK PKPLAEPAL" misc_feature complement(593320..>593868) /locus_tag="B565_0537" /note="phosphonate utilization associated putative membrane protein; Region: phn_DUF6; TIGR03340" /db_xref="CDD:163219" gene 594227..595117 /locus_tag="B565_0538" /db_xref="GeneID:10486455" CDS 594227..595117 /locus_tag="B565_0538" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004391190.1" /db_xref="GI:330828238" /db_xref="GeneID:10486455" /translation="MKLPPLRAVQYFEVVARLLSFSRAALELNVSQSAVSHQIRLLED FLGERLLLRQGRLLSLTPQGESYFEGIAAGLSQIAQSSEQLRGGGEMRVRLAVYSSFA VKWLIPRLAGLRQLYPELDLSLEMVAEDPELSDRVADCFITVSPHGRGYCHDLIYQER LFPVCSRRLLQQVSGEWPDAIWQLPLLSVQSIYKARGEDWQRWAKAGGLVIPDEARMH HFSHVLLAMEAAAWDQGVAFVNDYMLRPDDPQLVALPVHQLETGDAFYFTCKRSRAHE PAISRLRQWLMMETRQSMPL" misc_feature 594230..595102 /locus_tag="B565_0538" /note="DNA-binding transcriptional activator GcvA; Provisional; Region: PRK11139" /db_xref="CDD:182990" misc_feature 594242..594421 /locus_tag="B565_0538" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 594500..595084 /locus_tag="B565_0538" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature order(594545..594550,594554..594559,594566..594568, 594578..594580,594584..594604,594875..594892, 594908..594913,594917..594922) /locus_tag="B565_0538" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene complement(595127..595906) /locus_tag="B565_0539" /db_xref="GeneID:10486456" CDS complement(595127..595906) /locus_tag="B565_0539" /codon_start=1 /transl_table=11 /product="high affinity zinc ABC transporter permease" /protein_id="YP_004391191.1" /db_xref="GI:330828239" /db_xref="GeneID:10486456" /translation="MDSFLLYALAAGLGIALLAGPLGSFVVWRKMAYFGDTLSHACLF GIALGILLQVDLTLAVVVCCLAMAMLLVIMSRNQQVATDTLLGILAHSALSLGLVTLS FMDNVRVDLMAYLFGDLLSVQPMDLLWIYGGGALVLLTLWRLWDPLLSMTISEELARV EGIRVDVLRCVLMLLIGLVIAVAMKFVGALIITSLLIIPAATARRFSQTPEQMAGFAA LIGCLAVLGGLTLSWYQDTPAGPSVVVCATSLFVLSQFKRA" misc_feature complement(595145..595837) /locus_tag="B565_0539" /note="Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+. PBP-dependent ABC transporters consist...; Region: TM_ABC_iron-siderophores_like; cd06550" /db_xref="CDD:119348" misc_feature complement(order(595277..595279,595298..595300, 595424..595432,595436..595453,595457..595462, 595466..595474,595478..595483,595820..595828)) /locus_tag="B565_0539" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119348" misc_feature complement(order(595151..595156,595163..595165, 595172..595177,595184..595186,595331..595333, 595559..595561,595568..595573,595601..595603, 595607..595612,595619..595621,595628..595633, 595640..595645,595652..595657,595661..595663, 595802..595804,595817..595819,595823..595825)) /locus_tag="B565_0539" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119348" misc_feature complement(order(595193..595195,595208..595210, 595343..595345,595355..595357,595529..595531, 595601..595603)) /locus_tag="B565_0539" /note="putative PBP binding regions; other site" /db_xref="CDD:119348" gene complement(595928..596704) /locus_tag="B565_0540" /db_xref="GeneID:10486457" CDS complement(595928..596704) /locus_tag="B565_0540" /codon_start=1 /transl_table=11 /product="high-affinity zinc ABC transporter ATP-binding protein" /protein_id="YP_004391192.1" /db_xref="GI:330828240" /db_xref="GeneID:10486457" /translation="MSQLVELKEVSLSFDGRSVLDKVSFTLNKGKITTLVGPNGAGKS TLSKLVLGLLTPDSGKITRSRDLRVGYVPQRLYLDPTLPLTVRRFLQLGKNSRLSIEE ALARVGAEGLLENRMQKLSGGEMQRVLLARALLVKPELLVLDEPVQGVDITGQIELYA LIGQLAAEFNCAVLMVSHDLHLVMASTHEVICLNRHVCCHGEPESVARHPEFARLFGR PEQEVLAVYTHHHHCDGEHHHHEPQAPVIRLPSRNNAHSK" misc_feature complement(596024..596704) /locus_tag="B565_0540" /note="high-affinity zinc transporter ATPase; Reviewed; Region: znuC; PRK09544" /db_xref="CDD:181939" misc_feature complement(596102..596689) /locus_tag="B565_0540" /note="ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-...; Region: ABC_Metallic_Cations; cd03235" /db_xref="CDD:72994" gene 596798..597730 /locus_tag="B565_0541" /db_xref="GeneID:10486458" CDS 596798..597730 /locus_tag="B565_0541" /codon_start=1 /transl_table=11 /product="high affinity zinc ABC transporter periplasmic binding protein" /protein_id="YP_004391193.1" /db_xref="GI:330828241" /db_xref="GeneID:10486458" /translation="MRIIALFTALLAVSLPVRAIEVLTTIKPLGFIAAAITDGVSEPK VLLPTGASPHDFSLRPSDIRNINSADLVVWVGPELEGFMAKPLANHSHAPALTQVEGM PLFNYATQDSHDSHDHDDHVHAAHEHGDHDEGHEGHHHEGVDPHIWLGPTQAKVIAKA IASELGKLDPANQARYDANLAAFDAKVDAKDKVIAGQMKTVNEKGYFVFHEAYGYWER HYGMSSKGHFTVSPERRPGAKTLVDIRKALEEKQASCIYAEPQFSPAVIESVARNTGA KVLLLDEVGEQVPLGPDGYPQFMQQLADAFAQCR" misc_feature 596852..597724 /locus_tag="B565_0541" /note="Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism; Region: ZnuA; cd01019" /db_xref="CDD:29738" misc_feature 596861..597724 /locus_tag="B565_0541" /note="Periplasmic solute binding protein family; Region: SBP_bac_9; pfam01297" /db_xref="CDD:189932" misc_feature order(596957..596959,597233..597235,597425..597427, 597641..597643) /locus_tag="B565_0541" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:29738" gene 597798..598472 /locus_tag="B565_0542" /db_xref="GeneID:10486459" CDS 597798..598472 /locus_tag="B565_0542" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391194.1" /db_xref="GI:330828242" /db_xref="GeneID:10486459" /translation="MKWLLIPACTLALCCANVQASRLSEYIASPDLRAKLQEVYGGRA IQRAEAFSRLLTPRAGTTDQQKIELVNNYFNNLTYSEDPKLWGDEDYWANPLEFIGAR GGDCEDYSISKYYTLMELGVDEKKLRLAYVKAVRYNQFHMVTLYFPTPKADPLVLDNI NSRILPGSKRTDLIPVYSFDAKSIWIMKSRREGTLAGSADRLAQWTSMKTRFSSEQLR SPRRQL" misc_feature <597915..598364 /locus_tag="B565_0542" /note="Bacterial protein of unknown function (DUF920); Region: DUF920; cl01479" /db_xref="CDD:154425" gene complement(598467..599408) /locus_tag="B565_0543" /db_xref="GeneID:10486460" CDS complement(598467..599408) /locus_tag="B565_0543" /codon_start=1 /transl_table=11 /product="TRAP-type transport system, periplasmic component" /protein_id="YP_004391195.1" /db_xref="GI:330828243" /db_xref="GeneID:10486460" /translation="MKKLAMLLPLLWQPGLMAETVTITTGGEQGIYHQITKEFCRLAH EVDEQLACTLQSSSGSIENLTRLKSGETSYAMVQSDWLYQASQGLGPFTTQPQPELRA LFATHAEPFTIVIRADGDITSLEQLKLAPIDIGLKNSGTRQTALTLFNILGAKEQDLD LKSMANLPDALCSKQIDAFALVMGHPNRIVLDTAKRCAVSFLPIDGATRDQLLKGVKY YQRSQVPARIYPGNLKATPTFAIAATLVTNATMPEESVYRLTRAMLTQQTKFNEQTYG YANMFHRARNKTGPVLSIEQHPGAAKYFDELKAAGKL" misc_feature complement(598491..599408) /locus_tag="B565_0543" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(599405..600703) /locus_tag="B565_0544" /db_xref="GeneID:10486461" CDS complement(599405..600703) /locus_tag="B565_0544" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391196.1" /db_xref="GI:330828244" /db_xref="GeneID:10486461" /translation="MSLAKLLIRIIVVLFLIGAALLFALEVTTVRQSILDQMSANLET AITALGLVLQGTLLNDDNVLAETIVNAMFDGGFVSSVTLIDPDGQLLFQKVFHSTQQN VPGWLPSVIGMPPVKIEQELTDGWRMLGTLTLEGHSGYAYQHLWNAISRTGLALLAGL VVFTLIISLVCKRLLQPLEQINLQLIRIRKHQFNSTLPTPWLQDLKEVALSINQLVSE RKRDLLQQRLKITQLGKQLPLMTPQPLQGVSPLPEGGQLQKFVSTQGEIALYQRFLPS QPLGADSDLATIQSALQQWQHSHIEGILLPLSLLNHPQWSEISPLLSQGHGKTLDWRW DVATFPAHGQATLAALQEQGCELAFSAIPLNADTFNQLDPLNPIFISCQLTDAPLYWN LLSQTMHAAGYTLLAESGECRDIDKLRTWGIDGYAKEAQS" gene 601039..602301 /locus_tag="B565_0545" /db_xref="GeneID:10486462" CDS 601039..602301 /locus_tag="B565_0545" /codon_start=1 /transl_table=11 /product="metalloprotease, opacity-associated protein A family" /protein_id="YP_004391197.1" /db_xref="GI:330828245" /db_xref="GeneID:10486462" /translation="MLMLTAMTLSAVALLPAPGDILERPLRLELPIDTAGTATNENNT DFNEIPDHELVDQSAPDDDIPVDTTPQWQDYRVRNGENLTAIFNNLGLSTTTLYKVLD ADNKNYLARLKPGQNIELLIDQDNILQQLKIRLNIKQTLVMARSDDAYTASMINEKVE WQPQRYNGVINGSFYVSARNAGIPANHIQKIANLFQWRMNFAKDLQKGDKFKVLVRQE TVEGKSTGNSQLLGVEVTSQGKTVSAWLSDDGNYYDGQGNSLERGFRRYPTHSRYRIS SNFNPARKHPVTGMVRPHEGTDFAVPVGTPVLATGDGIVQKATSHPLAGTYIVIKHGR TLSTRYLHLSKLLVKTGQRVKMGDKIGLSGNTGRSTGAHLHYELRINNRPVNAMTAKL PMAEPLSGKERRQFLAKVKSYRKELAAG" misc_feature 601048..602289 /locus_tag="B565_0545" /note="putative peptidase; Provisional; Region: PRK11649" /db_xref="CDD:183257" misc_feature 601912..602196 /locus_tag="B565_0545" /note="Peptidase family M23; Region: Peptidase_M23; pfam01551" /db_xref="CDD:190031" gene complement(602373..603317) /locus_tag="B565_0546" /db_xref="GeneID:10486463" CDS complement(602373..603317) /locus_tag="B565_0546" /codon_start=1 /transl_table=11 /product="D-isomer specific 2-hydroxyacid dehydrogenase family protein" /protein_id="YP_004391198.1" /db_xref="GI:330828246" /db_xref="GeneID:10486463" /translation="MSQRTLLLLSQDNAHYERLLKAANLPHLRILRADNQSDAEKLIG EAHILMAEPARAKPLLPKANKLSWFQSTYAGVDVLLDPDSRRDYQLTNVRGIFGPLMS EYVFGHLLSLMRQIPLYREQQKQRLWQSHPYQGLKGRTMLILGTGSIGQHIAHTGKHF GMKVLGISRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRDTRHLFNAARFEHC KPGAILFNVGRGSAVHSDDLLTALRTGKLAMAVLDVFEQEPLPADSPLWGQPNLIVTP HNSAYSFPDDVAQIFVRNYIRFIDGQPLDGKIDFDKGY" misc_feature complement(602481..603002) /locus_tag="B565_0546" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene 603480..604061 /locus_tag="B565_0547" /db_xref="GeneID:10486464" CDS 603480..604061 /locus_tag="B565_0547" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391199.1" /db_xref="GI:330828247" /db_xref="GeneID:10486464" /translation="MFGDKFYKRLAELQPWQQTVYTLALAERMYPNYALFSQASGFGN AGAFRHALDQMWVYLTVKGSRVNLGAILEEFESHIPDPRKFESYGAYPALDACVALGC AYNSVICRVGEEANDASHASVGTVAGFIELLEERDLTEEELYEHEYMEAELEFQVELL KRVAHERDSDRILAIRVFASQDGVSNIGISLEE" misc_feature 603489..604052 /locus_tag="B565_0547" /note="Protein of unknown function (DUF416); Region: DUF416; cl01166" /db_xref="CDD:194057" gene complement(604133..604612) /locus_tag="B565_0548" /db_xref="GeneID:10486465" CDS complement(604133..604612) /locus_tag="B565_0548" /codon_start=1 /transl_table=11 /product="putative transcription regulator MarR family protein" /protein_id="YP_004391200.1" /db_xref="GI:330828248" /db_xref="GeneID:10486465" /translation="MEKHDEVLVALRQIIRAIDMHSRRLIKEAGLTSPQLLLLKGIDE LGQISMRQLADHTNMSQATATTIMDRLESRQLVQRVRSNTDKRKVHATLTDAGRALLA QAPTPLQERFIQRFQALEAWEQTLLLSSLQRISSMMNADEIDAAPVLSVRPLTEEQA" misc_feature complement(604214..604579) /locus_tag="B565_0548" /note="Transcriptional regulators [Transcription]; Region: MarR; COG1846" /db_xref="CDD:32031" misc_feature complement(604241..604525) /locus_tag="B565_0548" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene 604773..605303 /locus_tag="B565_0549" /db_xref="GeneID:10486466" CDS 604773..605303 /locus_tag="B565_0549" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391201.1" /db_xref="GI:330828249" /db_xref="GeneID:10486466" /translation="MMNDELDIKSLVAELRVVRVRYELPDTSAFVRYQPAYDEDPNNL KVHHYDGELPLSCSETGTFNLKELVNELRYAYVLVHLFPDESAMNFYLTGLDTGLAQL EFIGGSYDFNRLWITSGISNLGVPMAIFLGKRHAVNGQPSVSLVDHREQAAGKLVYRA IGGAGDHVGEDFFNND" gene 605313..606911 /locus_tag="B565_0550" /db_xref="GeneID:10486467" CDS 605313..606911 /locus_tag="B565_0550" /codon_start=1 /transl_table=11 /product="betaine/carnitine/choline family transporter" /protein_id="YP_004391202.1" /db_xref="GI:330828250" /db_xref="GeneID:10486467" /translation="MRASKGLLKGLNPTMAMTALTVITLFLLFGVFVPDTAAAWFVGA KDQIIAGFKWYYILVVALFLFFAVYLMFSRFGSIRLGDDDQVPEFGYFAWFSMLFSAG MGIGLVFWSIAEPMNHLQGNPFITEGMTPEAAQIAMRLTFFHWGLHPWAIYVIVGLSL AFFSYRRKLPLAIRSVLYPILGERIYGFWGHAADVLAVFGTVFGVATSLGLGVSQMNT GLNQMFGMDVSQSNQLWLIGGISLIATLSAVSGVGRGVKILSELNIWLSVFVLALFLV LGPTTYILNAYVQNIGDYLQNIVKLSFWTNTEANGTSAWQSSWTAFYWGWWIAWAPFV GMFIARISKGRTIREFVLGVLLVPSLLGMFWLTVFGGTAMNLELFGGGGVVAAVNQDV TLALYKTVELLHWDTFGWIAKAVLTLLICTYFITSSDSGTLVITTLLSIGDQEPPVLH RAVWGLGQGLVAAILLVSGGLAALQAASIIAALPFSVIMLAMCYSLMLGLKQESQRQF EYRQNLKRHDGSSHMSLMERIGPA" misc_feature 605364..606821 /locus_tag="B565_0550" /note="BCCT family transporter; Region: BCCT; cl00569" /db_xref="CDD:189118" gene complement(607030..608193) /locus_tag="B565_0551" /db_xref="GeneID:10486468" CDS complement(607030..608193) /locus_tag="B565_0551" /codon_start=1 /transl_table=11 /product="multifunctional Cca protein" /protein_id="YP_004391203.1" /db_xref="GI:330828251" /db_xref="GeneID:10486468" /translation="MVGATVEQMLALGFTQVGRDFPVFLHPKTQQEYALARTERKQGQ GYTGFVCHAAPDVTLEQDLLRRDLTINAIAEDDQGQLHDPYGGIKDLEKRLLRHVSPA FAEDPLRILRVARFAARFHAQGFTIAPETLALMSEMTAAGELAHLTPERVWKELEKVL LGPTPQIFIEVLRQCGALKALFPEIDALFGVPAPAKWHPEIDTGIHTLMVLEQACRIS PELTVRFAALCHDLGKGVTPKEFWPSHHGHGQKGLPLIRALCERFRVPNECRDLALLV SDLHTHIHIAFELKPATLLKVFDKADAWRRPERFAQLLDACRADFHGRTGFEERVYAE PDYVAEALAAAQAVPVKEIVAAGYKGEEIKEQLAKKRTDAISRIKDEWTFIEE" misc_feature complement(607051..608190) /locus_tag="B565_0551" /note="multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; Reviewed; Region: cca; PRK10885" /db_xref="CDD:182810" misc_feature complement(607915..>608187) /locus_tag="B565_0551" /note="Nucleotidyltransferase (NT) domain of DNA polymerase beta and similar proteins; Region: NT_Pol-beta-like; cl11966" /db_xref="CDD:196289" misc_feature complement(607627..607824) /locus_tag="B565_0551" /note="Probable RNA and SrmB- binding site of polymerase A; Region: PolyA_pol_RNAbd; pfam12627" /db_xref="CDD:193105" misc_feature complement(607285..607587) /locus_tag="B565_0551" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" gene 608197..608382 /locus_tag="B565_0552" /db_xref="GeneID:10486469" CDS 608197..608382 /locus_tag="B565_0552" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391204.1" /db_xref="GI:330828252" /db_xref="GeneID:10486469" /translation="MIPVALRQSQQAIPHCAPNQISLQTVSPVINRGAEYIVFVTALL PDHHLPAAPVSAALTWA" gene 608506..609558 /locus_tag="B565_0553" /db_xref="GeneID:10486470" CDS 608506..609558 /locus_tag="B565_0553" /codon_start=1 /transl_table=11 /product="A/G-specific adenine glycosylase MutY" /protein_id="YP_004391205.1" /db_xref="GI:330828253" /db_xref="GeneID:10486470" /translation="MNQSTFASRVLEWYQLHGRKTLPWQQEKTPYRVWVSEIMLQQTQ VATVIPYYQRFMARFPDVVALADAPVDEVLHHWTGLGYYARARNLHKAAQQIRDHHHG LFPESFDEVMALPGIGRSTAGAVLSLSLGQPHAILDGNVKRVLTRWLALPGWPGQKQV ENELWEIAIRLTPKLGVAQYNQAMMDIGATICTRSKPACDRCPVRGDCQGLSQGNPTA YPNSKPKKSIPARDGIMLLIRHGDELLLEKRPPQGIWGGLYCFPQVASLAEVDGLLAS LGLSHHGYRELAGFRHTFSHFHLDIQPLLIDIDEAQPLRLMEADNRLWYNLRHPAEVG LAAATARLLAYPELQP" misc_feature 608506..609534 /locus_tag="B565_0553" /note="adenine DNA glycosylase; Provisional; Region: PRK10880" /db_xref="CDD:182805" misc_feature 608596..609069 /locus_tag="B565_0553" /note="endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases; Region: ENDO3c; cd00056" /db_xref="CDD:28938" misc_feature order(608629..608637,608644..608646,608758..608760) /locus_tag="B565_0553" /note="minor groove reading motif; other site" /db_xref="CDD:28938" misc_feature 608845..608868 /locus_tag="B565_0553" /note="helix-hairpin-helix signature motif; other site" /db_xref="CDD:28938" misc_feature order(608875..608877,609046..609048,609058..609060) /locus_tag="B565_0553" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:28938" misc_feature 608917..608919 /locus_tag="B565_0553" /note="active site" /db_xref="CDD:28938" misc_feature 609079..609129 /locus_tag="B565_0553" /note="Iron-sulfur binding domain of endonuclease III; Region: EndIII_4Fe-2S; pfam10576" /db_xref="CDD:192633" misc_feature 609211..609537 /locus_tag="B565_0553" /note="DNA glycosylase (MutY in bacteria and hMYH in humans) is responsible for repairing misread A*oxoG residues to C*G by removing the inappropriately paired adenine base from the DNA backbone. It belongs to the Nudix hydrolase superfamily and is important...; Region: DNA_Glycosylase_C; cd03431" /db_xref="CDD:72889" misc_feature order(609262..609270,609379..609381,609388..609393) /locus_tag="B565_0553" /note="DNA binding and oxoG recognition site [nucleotide binding]" /db_xref="CDD:72889" gene 609567..609839 /locus_tag="B565_0554" /db_xref="GeneID:10486471" CDS 609567..609839 /locus_tag="B565_0554" /codon_start=1 /transl_table=11 /product="putative Fe(2+)-trafficking protein" /protein_id="YP_004391206.1" /db_xref="GI:330828254" /db_xref="GeneID:10486471" /translation="MSRTVFCQRLKKEGPGLDFQLYPGELGKRIFDNISKEAWAEWQK KQVMLINEKKLNMMNLEHRQLLEKEMVSYLFDAGEVQIEGYTPPAQ" misc_feature 609567..609836 /locus_tag="B565_0554" /note="Bacterial Fe(2+) trafficking; Region: Iron_traffic; cl01104" /db_xref="CDD:186337" gene 609956..611059 /locus_tag="B565_0555" /db_xref="GeneID:10486472" CDS 609956..611059 /locus_tag="B565_0555" /codon_start=1 /transl_table=11 /product="membrane-bound lytic murein transglycosylase C" /protein_id="YP_004391207.1" /db_xref="GI:330828255" /db_xref="GeneID:10486472" /translation="MGRIFWLLCTLLFLSACSSSPKPSGSEDDDLVNGKDIRGFEHMI SALSHNVNEIWGREALFAGKFDYVKYTDQYKSRAHIDFSSGHIMVETVSGIDPRAHLR RAIIETLLTPDDPAEVDLYSDREILTGGEPFLYGQVLDNQRQPIRASWRAERYADYLL NTAMKKRTLGIRTIFFVDIPMVANHEDRRGYKYAGIIREASRKYGVPESLIYAVIKTE SSFNPYAVSHANAYGLMQVIPATAGRDVYVRVKGKNGQPTREELFNPAYNIDVGTAYL HLLQTVYLADIQDPRSRRYAVISAYNGGAGGVLNTFSSDRKAAPGRINRLSPEAVYQV LTEQHPKEEARRYLYKVNQAEKGFKRAFASRAG" misc_feature 609962..610531 /locus_tag="B565_0555" /note="Domain of unknown function (DUF3393); Region: DUF3393; pfam11873" /db_xref="CDD:152309" misc_feature 610058..611035 /locus_tag="B565_0555" /note="murein transglycosylase C; Provisional; Region: mltC; PRK11671" /db_xref="CDD:183271" misc_feature 610580..610909 /locus_tag="B565_0555" /note="Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain. Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic 'goose-type' lysozymes (GEWL). LTs catalyze...; Region: LT_GEWL; cd00254" /db_xref="CDD:29556" misc_feature order(610607..610609,610667..610669,610778..610780, 610856..610858) /locus_tag="B565_0555" /note="N-acetyl-D-glucosamine binding site [chemical binding]; other site" /db_xref="CDD:29556" misc_feature 610607..610609 /locus_tag="B565_0555" /note="catalytic residue [active]" /db_xref="CDD:29556" gene complement(611145..611531) /locus_tag="B565_0556" /db_xref="GeneID:10486473" CDS complement(611145..611531) /locus_tag="B565_0556" /codon_start=1 /transl_table=11 /product="OB-fold nucleic acid binding domain-containing protein" /protein_id="YP_004391208.1" /db_xref="GI:330828256" /db_xref="GeneID:10486473" /translation="MNKASASVIGLLTLMSVSSFAMAAYTGPQEQNKVSVAQLKDLAD DSWATLEGKLVKHLGGENYLFRDASGEVEVEVDQDVWRGTEVGPDDQIRIRGEVDHSW NKTEVEVKTLEKVGAAPQTKGGFIAK" misc_feature complement(611187..>611459) /locus_tag="B565_0556" /note="Bacterial OB fold (BOF) protein; Region: BOF; cl01196" /db_xref="CDD:194065" gene 611786..612823 /locus_tag="B565_0557" /db_xref="GeneID:10486474" CDS 611786..612823 /locus_tag="B565_0557" /codon_start=1 /transl_table=11 /product="phosphatidylcholine-sterol acyltransferase" /protein_id="YP_004391209.1" /db_xref="GI:330828257" /db_xref="GeneID:10486474" /translation="MKKWLVCLLGLMALTAQAAEGRQPFSRVVMFGDSLSDTGKMYKK MRGYLPSSPPYFNGRFSNGPVWLEQLGDERFPGLVVANEAEGGATAVAYNHLGALNGW LGFWSWDPKYQVINNLDYEIDQFLKKDKFRPDDLVVIWVGANDYLAYGWNTERDADRV IDTIRLASNRLVLNGAQQILLFNIPGLGQTPSARSMKVVEKVRHVASYHNQKLQNLTR ELAPLGIVKLFEVDKQFDEMMRDPQQFGLSDTEHACYGGGYTWKPFSGSAAEVAATPA LSVSERVAIAGNPILAQAVVSGQAKGRAATLNCDEHMFWDQVHPTKTVHKVLSQRVAD FIDQHYEFVRH" misc_feature 611864..612790 /locus_tag="B565_0557" /note="Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its...; Region: fatty_acyltransferase_like; cd01846" /db_xref="CDD:58521" misc_feature order(611885..611887,612044..612046,612215..612217, 612731..612733,612740..612742) /locus_tag="B565_0557" /note="active site" /db_xref="CDD:58521" misc_feature order(611885..611887,612731..612733,612740..612742) /locus_tag="B565_0557" /note="catalytic triad [active]" /db_xref="CDD:58521" misc_feature order(611885..611887,612044..612046,612215..612217) /locus_tag="B565_0557" /note="oxyanion hole [active]" /db_xref="CDD:58521" gene 613089..614126 /locus_tag="B565_0558" /db_xref="GeneID:10486475" CDS 613089..614126 /locus_tag="B565_0558" /codon_start=1 /transl_table=11 /product="outer membrane protein A" /protein_id="YP_004391210.1" /db_xref="GI:330828258" /db_xref="GeneID:10486475" /translation="MKKSLITLLVTGLLAANAQAAGQDNTWYGGAKLGWSNFYGIDES NALTLGNETNDALGAGVFGGYQINKNLGLELGYDYLGNYKYDATTAAGAFSDEVKAQL AQLTLKLGFPVTDNLDLYGRVGGGYGWADTKSDVYKDDSRFVMVGALGAEYAFNLDWA ARLEYQYTTPYGSRDDTGLRMDNGLLSLAAVYRFGQVAPVAPAPAPEPAPAPVMVEKQ FTLSSDVLFDFNKATLKPEASQALDSLYSQIEEARPKDGVATVIGHTDRIGSDAYNQK LSEQRAQTVANYLVGKGIPAAKINVEGRGKSSPVTGDSCVSKSKRELIVCLAPDRRVD VKVEGVSEVQE" misc_feature 613089..614120 /locus_tag="B565_0558" /note="outer membrane protein A; Reviewed; Region: PRK10808" /db_xref="CDD:182748" misc_feature 613167..613673 /locus_tag="B565_0558" /note="Surface antigen; Region: Surface_Ag_2; cl01155" /db_xref="CDD:194055" misc_feature 613758..614099 /locus_tag="B565_0558" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature order(613773..613778,613881..613886,613893..613895, 613905..613910,613917..613919,614049..614051, 614079..614081) /locus_tag="B565_0558" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene complement(614257..615279) /locus_tag="B565_0559" /db_xref="GeneID:10486476" CDS complement(614257..615279) /locus_tag="B565_0559" /codon_start=1 /transl_table=11 /product="GGDEF domain-containing protein" /protein_id="YP_004391211.1" /db_xref="GI:330828259" /db_xref="GeneID:10486476" /translation="MSKDTFAQSAAYLKQAVPLMIKYQIPTTPDNYHLWYNYVSASMP ELNQAIDQAVKMQGTCSLTTCERLYHQYLAAQDEKQMEAMKLSLAAMANELGHSMQDA ISDTGMFQEMLDKSFDKLSKIDDEGLSLEDTMGILRELVRESRDVRMSTMHFRNQLSN AEKEIKELRAALNETRKLANEDALTSLLNRRAFDLELEGLIRSQQSFSLILTDIDRFK SFNDEYGHLLGDQVLRAFSKRLRDASKEGVTAYRIGGEEFALLLPHRSLALARQMAES MRRAIERMSILDRKSGRRIDHITASFGVGEFNGQESADSLVERTDKLLYKAKELGRNR VMPLPS" misc_feature complement(614275..614736) /locus_tag="B565_0559" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(614512..614514,614641..614643)) /locus_tag="B565_0559" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(614509..614520,614524..614526, 614590..614592,614602..614604,614614..614619, 614626..614628)) /locus_tag="B565_0559" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(614452..614454,614536..614538)) /locus_tag="B565_0559" /note="I-site; other site" /db_xref="CDD:143635" gene 615414..617807 /locus_tag="B565_0560" /db_xref="GeneID:10486477" CDS 615414..617807 /locus_tag="B565_0560" /codon_start=1 /transl_table=11 /product="ribonuclease R" /protein_id="YP_004391212.1" /db_xref="GI:330828260" /db_xref="GeneID:10486477" /translation="MSQKDPFLEREAEKYDNPIASRELILELIKGHEKPMSREELAKV LKLKDEEPLEALRRRLRAMERDGQLVFTRNQCYALPDRLNLVKGYVIGHKDGFGFLRP EGGGPDLYLNNREMQRLMHGDYVLVQPTEIDRKGRQEARLVRLLKSREADIVGRYFVE NGVGFVVPDDSRIGQDIIIPEGENKGARQSQVVVVRINQRATSRINAVGTVLEVLGEN MAPGMEIEIALRTHGIPHTWPEEVTKEVAGLGEQVPEKAKEGRIDLRALPLVTIDGED ARDFDDAVFCEAKRGGGWRLWVAIADVSAYVKPGTALDAEAYQRGNSVYFPEFVVPML PEVLSNGLCSLNPQVDRLCMVCEMTISAAGRMSGYKFYEAVMNSHARLTYTKVAAILD GDPKLRQQYDPLVGHIEELNNLYKALKHARHQRGAVEFESEETRFIFNAQRKIDRIVP LVRNDAHKIIEECMIQANVAAARYIEKNEAFALFRVHDRPGEERLTGFRDFLAELGLE LKGGLEPEPKDFAELAAKFEGRPDAELLSTMLLRSMRQAIYQADNIGHFGLALKSYAH FTSPIRRYPDLILHRAIKYQTAKEQQGNLRHKWTPSGGYHYQLEEVDPMGEHCSMTER RADDATRDVADWLKCEYMLDHVGDEFDGVIASVTGFGFFVRLAEIHIDGLVHVSTLTN DYYQFDPLHMQLIGENFRRRYRLGDKVRVKVMGVNLDDRKIDFVMVEEPLKATGKNAK EMARKQAEIKKEKAKSAQRHEKRKEGKDHGKSDKGGRAKPSNRRPSKKARDKAKSTK" misc_feature 615414..617804 /locus_tag="B565_0560" /note="exoribonuclease R; Provisional; Region: PRK11642" /db_xref="CDD:183253" misc_feature 615675..615845 /locus_tag="B565_0560" /note="S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain...; Region: S1_like; cl09927" /db_xref="CDD:195927" misc_feature 616194..617165 /locus_tag="B565_0560" /note="RNB domain; Region: RNB; pfam00773" /db_xref="CDD:189712" misc_feature 617349..617597 /locus_tag="B565_0560" /note="S1_RNase_R: RNase R C-terminal S1 domain. RNase R is a processive 3' to 5' exoribonuclease, which is a homolog of RNase II. RNase R degrades RNA with secondary structure having a 3' overhang of at least 7 nucleotides. RNase R and PNPase play an...; Region: S1_RNase_R; cd04471" /db_xref="CDD:88436" misc_feature order(617376..617378,617400..617402,617433..617435, 617439..617441) /locus_tag="B565_0560" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88436" gene 617804..618553 /locus_tag="B565_0561" /db_xref="GeneID:10486478" CDS 617804..618553 /locus_tag="B565_0561" /codon_start=1 /transl_table=11 /product="TrmH family RNA methyltransferase" /protein_id="YP_004391213.1" /db_xref="GI:330828261" /db_xref="GeneID:10486478" /translation="MSTELIYGIHAVTALLERTPERFIEVWALKGRDDDRLQPLLTEL ESLGLKVQSVNRKTLDDKAEGNNHQGIMARVKEAPKLAEHDLASLLDELAAQQSQPFL LVLDGVTDPHNLGACLRSADAAGAHAVIVPRDKATGLTPIVRKVACGAAEVVPLIQVT NLARTLRELQERGVWIVGTAGEADHDLYQAKLTGPMALVMGAEGKGMRRLTREHCDEL VSIPMAGAVSSLNVSVATGVCLFEAVRQRRG" misc_feature 617807..618550 /locus_tag="B565_0561" /note="23S rRNA (guanosine-2'-O-)-methyltransferase; Provisional; Region: PRK11181" /db_xref="CDD:183021" misc_feature 617816..618040 /locus_tag="B565_0561" /note="RNA 2'-O ribose methyltransferase substrate binding; Region: SpoU_sub_bind; pfam08032" /db_xref="CDD:149230" misc_feature 618101..618526 /locus_tag="B565_0561" /note="SpoU rRNA Methylase family; Region: SpoU_methylase; cl00362" /db_xref="CDD:193788" gene 618556..619128 /locus_tag="B565_0562" /db_xref="GeneID:10486479" CDS 618556..619128 /locus_tag="B565_0562" /codon_start=1 /transl_table=11 /product="Crp family transcription regulator" /protein_id="YP_004391214.1" /db_xref="GI:330828262" /db_xref="GeneID:10486479" /translation="MLTDRPPFDWAQVADREEAARLLSFARPLTLSPKSCLWHAGDSP DLLVRVEQGLLRAKLVLEDGREYIKEFYWEGDEFLDFHHLLSGEPARYSVEALEPCRL QLFSLADLRQLPGWPRWYQHLLEVQLRIKEEKEQLLLTGSPQARYQHFLDSFPALDAR VPDHQIAAYLGITPISLSRIRKRLKELNKG" misc_feature 618598..618894 /locus_tag="B565_0562" /note="effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO...; Region: CAP_ED; cd00038" /db_xref="CDD:28920" misc_feature order(618793..618798,618823..618831) /locus_tag="B565_0562" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:28920" gene 619185..619640 /locus_tag="B565_0563" /db_xref="GeneID:10486480" CDS 619185..619640 /locus_tag="B565_0563" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004391215.1" /db_xref="GI:330828263" /db_xref="GeneID:10486480" /translation="MNWILKPWSELTTDELYELLALRAEVFVVEQTCPFQDLDGLDRR DGVWHLLGYQGELLAAYARIMAPGIGDESGAAIGRVVTSPKARGGGLGHQLIGEAVKA CEARWPTHSIWLGAQAHLQGFYGQHGFVAEGEGYLEDDIPHMGMRRVVA" misc_feature 619185..619628 /locus_tag="B565_0563" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(619713..620936) /locus_tag="B565_0564" /db_xref="GeneID:10486481" CDS complement(619713..620936) /locus_tag="B565_0564" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase SrmB" /protein_id="YP_004391216.1" /db_xref="GI:330828264" /db_xref="GeneID:10486481" /translation="MSQSFDDFDLHPALNRALAEMGFTRPTTIQQMVLEPALDGRDIL ASAPTGTGKTASFLLPALQHLLDFPRRKPGPCRMLILTPTRELALQVTAHAKALAAHT NLSIETIIGGVSHEEQLPALTKTTDIVVATPGRLLEYIEKEEFESHDIEVLVLDEADR MLDMGFIKDVNRIVAEARYRKHTMLFSATLEGAGLEKFANEILKDPVELHAEPPRSER RPITQWIHLADDAAHKLALLTHILKDPETQKAIIFVKTRERLAELSGQLQAAGISCAW IRGEMEQSKRIESIRKFHEGEVPFLIATDVAARGIDLPNVSHVINYDMPYGADVYVHR IGRTGRAGNRGCAISLVEAHDMAMVAKIERYTEERLKRRVIDELRPKHKEARVPVKKK KPVDKKKSAKKKKKK" misc_feature complement(620310..620924) /locus_tag="B565_0564" /note="DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (...; Region: DEADc; cd00268" /db_xref="CDD:28928" misc_feature complement(620274..620885) /locus_tag="B565_0564" /note="DEAD-like helicases superfamily; Region: DEXDc; smart00487" /db_xref="CDD:128763" misc_feature complement(620775..620789) /locus_tag="B565_0564" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28928" misc_feature complement(620460..620471) /locus_tag="B565_0564" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:28928" misc_feature complement(620370..620378) /locus_tag="B565_0564" /note="motif III; other site" /db_xref="CDD:28928" misc_feature complement(619887..>620195) /locus_tag="B565_0564" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature complement(order(620019..620027,620100..620105, 620163..620174)) /locus_tag="B565_0564" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(order(619917..619919,619926..619928, 619938..619940,620001..620003)) /locus_tag="B565_0564" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene 621056..621766 /locus_tag="B565_0565" /db_xref="GeneID:10486482" CDS 621056..621766 /locus_tag="B565_0565" /codon_start=1 /transl_table=11 /product="tRNA (adenine-N(6)-)-methyltransferase" /protein_id="YP_004391217.1" /db_xref="GI:330828265" /db_xref="GeneID:10486482" /translation="MGRSRGFTFKQFHINHDRCAMKVGTDGILLGAWAPVEQARRVLD IGTGSGLIALMLAQRSRSDCRLDAVELDINAASQARENAAASPWADRVTVIESAIQDY QADPYDLVVSNPPYFVAGQSFSDPARALARHTGALDSHALLAACDRLLSPNGQVALVL PTAMADEILCISANYDLHGICYTAVITREGKEANRVLLLLGRGLNRCERGEIVIHSAN GAYSDRYIQLTNPFYLKM" misc_feature 621068..621763 /locus_tag="B565_0565" /note="Predicted O-methyltransferase [General function prediction only]; Region: COG4123" /db_xref="CDD:33880" misc_feature 621176..621544 /locus_tag="B565_0565" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature order(621188..621208,621263..621268,621344..621346, 621392..621394) /locus_tag="B565_0565" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 622003..623262 /locus_tag="B565_0566" /db_xref="GeneID:10486483" CDS 622003..623262 /locus_tag="B565_0566" /codon_start=1 /transl_table=11 /product="Branched-chain amino acid transport system II carrier protein" /protein_id="YP_004391218.1" /db_xref="GI:330828266" /db_xref="GeneID:10486483" /translation="MTFAFYLGAGNIIFPPLAGYMAGEHLSLAMFGFLVTAVGLPLVT ILAVAKAGNGWAGMTKLLPAGVATALAVAIYIIIGPAFAAPRTGLVAYEMGLKPFIGD MGQAGLAAYTVIFFGVAILVSMNQGKLMDAIGKYLTPVLMLLLLTLAIGVFVAPQGTM PDASGDYQNSPFVKGILEGYNTMDTLASLMFGALIVDLLRQKGINDYKSQFKYLAIAG LISAVGLSVVYVSLFQLGNTAAGVATDVSNGGAIVNAYVLSLFGQPGQFILAAIITLA CFTTAVGLISACSDFFHNLTGMAYKKLVVLLGVICAVVANVGLSQLISLSIPVLVAIY PVAVALVLVTFLKGYFGRPRLVFRGVLMVAFLFGCLDGLGAAGMKMDAFAFLPLFDKG LAWLMPTLLACVVGVMVRPTEMAAEAA" misc_feature 622003..623220 /locus_tag="B565_0566" /note="Branched-chain amino acid transport protein; Region: Branch_AA_trans; cl00547" /db_xref="CDD:186073" gene 623712..624989 /locus_tag="B565_0567" /db_xref="GeneID:10486484" CDS 623712..624989 /locus_tag="B565_0567" /codon_start=1 /transl_table=11 /product="Branched-chain amino acid transport system II carrier protein" /protein_id="YP_004391219.1" /db_xref="GI:330828267" /db_xref="GeneID:10486484" /translation="MTFAFYLGAGNIIFPPLAGFMAGEHLLAAMCGFLLTAVGLPLIT LIAVAKGSSGGGASGWTGMTRYLPAGAATALAIAIYIIMGPAFAIPRTGLVAYEMGLK PWLGDAGHAGLLIYTLSFFALVILVALDRGKLLDAVGKYLTPALMAMLLILAVGVFMT PQGTMPDASGEYIDAALTKGMLEGYNTMDTLASLMFGALIIGLLRQKGIEDYRSQFKY LTIAGLISAVGLSAVYVSLFQLGNSAGGVASDISNGGAIVNAYVLSLFGQPGQFILAA IITLACFTSAVGLLCAGADYFHGLTGWAYRNWVILLGALCAVVANVGLSELIGLSIPV LVAIYPVAIALVLVTFLKGWFAQPRLAFRGVLTVAFLFGCLDGLGAAGMAMDGFAFLP LFDKGLAWLLPTLLACIVGILVRLSGKLAAEAA" misc_feature 623712..624953 /locus_tag="B565_0567" /note="Branched-chain amino acid transport protein; Region: Branch_AA_trans; cl00547" /db_xref="CDD:186073" gene complement(625063..625281) /locus_tag="B565_0568" /db_xref="GeneID:10486485" CDS complement(625063..625281) /locus_tag="B565_0568" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391220.1" /db_xref="GI:330828268" /db_xref="GeneID:10486485" /translation="MKWIFICWALLLILSDIQISTSLYKYEDNRVLINFPRWEAKQPW GTFEWHAGRVETHWYGLEGKPKPKGPPI" gene complement(625298..625759) /locus_tag="B565_0569" /db_xref="GeneID:10486486" CDS complement(625298..625759) /locus_tag="B565_0569" /codon_start=1 /transl_table=11 /product="CheC-like protein" /protein_id="YP_004391221.1" /db_xref="GI:330828269" /db_xref="GeneID:10486486" /translation="MKADFVNPFLLSLLNVLSTMAQLELKPGKPKRKMDELARGDVSG LIGMVGPQTRGSLSISFEKGLALEIMRRMLGEAPANINEEVTDMVGEITNMVTGGAKR MLGEKGYEFDMATPIIVSGPNHTITHRADGTKIMMPFESDFGRATIEICFE" misc_feature complement(625301..625759) /locus_tag="B565_0569" /note="Predicted inhibitor of MCP methylation, homolog of CheC [Cell motility and secretion]; Region: COG1406" /db_xref="CDD:31596" gene complement(625749..626207) /locus_tag="B565_0570" /db_xref="GeneID:10486487" CDS complement(625749..626207) /locus_tag="B565_0570" /codon_start=1 /transl_table=11 /product="Zinc uptake regulation protein" /protein_id="YP_004391222.1" /db_xref="GI:330828270" /db_xref="GeneID:10486487" /translation="MNQDQLLQRAERLCIQRGIRFTPTRRQVFRLLAAHGNAISAYDL LAQLQQTEANAKPPTVYRALDFLLEQGFAHKVESLNAFIFCCHFDHAHPMQLLICDEC GDVVELHDTAIDSAFSEQAHLHGFTITNKTIEAHGQCARCTPTVGSHHEG" misc_feature complement(625791..626135) /locus_tag="B565_0570" /note="Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators; Region: Fur_like; cd07153" /db_xref="CDD:133478" misc_feature complement(order(625887..625889,625932..625934, 625938..625940,625959..625961,626094..626096)) /locus_tag="B565_0570" /note="metal binding site 2 [ion binding]; metal-binding site" /db_xref="CDD:133478" misc_feature complement(625998..626042) /locus_tag="B565_0570" /note="putative DNA binding helix; other site" /db_xref="CDD:133478" misc_feature complement(order(625815..625817,625866..625868, 625935..625937,625941..625943)) /locus_tag="B565_0570" /note="metal binding site 1 [ion binding]; metal-binding site" /db_xref="CDD:133478" misc_feature complement(order(625794..625820,625824..625832, 625857..625862,625908..625916)) /locus_tag="B565_0570" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133478" misc_feature complement(order(625791..625793,625902..625904, 625911..625913)) /locus_tag="B565_0570" /note="structural Zn2+ binding site [ion binding]; other site" /db_xref="CDD:133478" gene 626345..627331 /locus_tag="B565_0571" /db_xref="GeneID:10486488" CDS 626345..627331 /locus_tag="B565_0571" /codon_start=1 /transl_table=11 /product="tRNA-dihydrouridine synthase A" /protein_id="YP_004391223.1" /db_xref="GI:330828271" /db_xref="GeneID:10486488" /translation="MQAQRFSIAPMLDWTDRHCRYFHRLMSRQTLLYTEMVTTGAIIH GKGDYLGYSEQEHPISLQLGGSNPADLARCAKLAEERGYDEVNINVGCPSDRVQNGRF GACLMGEPALVADCVKAMRDVVDIPVTVKTRIGIDDQDSYEFLQAFIEQVRDAGCDTF IVHARKAWLSGLSPKENREIPPLDYPRVYRVKQDYPELTIALNGGVTSMEQTLEHLQH VDGVMMGREAYQNPYILAQVDNLVFGQNNAVPSRHEVVRMMLPYIEQELAKGNYLSHM TRHMLGLFQNMQGARAWRRHLSENACKPGADIQVVLDAMAKVPEFTASETAE" misc_feature 626345..627319 /locus_tag="B565_0571" /note="tRNA-dihydrouridine synthase A; Provisional; Region: PRK11815" /db_xref="CDD:183323" misc_feature 626357..627073 /locus_tag="B565_0571" /note="Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and...; Region: DUS_like_FMN; cd02801" /db_xref="CDD:73368" misc_feature order(626369..626377,626450..626452,626528..626530, 626609..626611,626735..626737,626831..626833, 626951..626953,626957..626959,627017..627022) /locus_tag="B565_0571" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73368" misc_feature order(626528..626530,626618..626623,626735..626737, 626741..626743,626828..626833,626837..626842, 626954..626959,627020..627022) /locus_tag="B565_0571" /note="active site" /db_xref="CDD:73368" misc_feature order(626618..626620,626741..626743,626831..626833, 626837..626839) /locus_tag="B565_0571" /note="catalytic residues [active]" /db_xref="CDD:73368" misc_feature order(626621..626623,626735..626737,626828..626830, 626840..626842,626954..626959) /locus_tag="B565_0571" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73368" gene complement(627401..628960) /locus_tag="B565_0572" /db_xref="GeneID:10486489" CDS complement(627401..628960) /locus_tag="B565_0572" /codon_start=1 /transl_table=11 /product="Aerotaxis receptor Aer" /protein_id="YP_004391224.1" /db_xref="GI:330828272" /db_xref="GeneID:10486489" /translation="MTKLHQEGEIHFPDNIALISTTDPASHITYANQHFCDVAGYGAA EMEGVPHNLVRHPDMPKVAFADMWQRLRQGKSWMGLVKNRAKSGQFYWVNAYVTPILN AQKEIVEFQSVRTKPAASDVAWAEQLYGLLRSGKALPWLSRCHIEPGQLTLWLSASAL FTTLATFATGNLLWLLPTALLLLAQATHGWRLQQRLAHLLTLADQDKGTRLCQVLYTR RRDTLAAVELALRMKQAELKAVVGRSADTNQQILQAAEDDRGNIQTIDTHLQQQRAHS EQLATAITELSHSIRDVAHSAHEASNLVIEVQQVSDEGLQALATTRSAVNQLHQELDA NHAVLAQLTSDSQKISGILEVISQIADQTNLLALNAAIEAARAGEQGRGFAVVADEVR ALAQKTRASTSEIHEMIQALQQTTRQLSDGMTQGAQTSVRCQQHSGITADVLTQINRM LGQVTRTSDEIAQAVSQQADVTATLDEGVHQIHQLASHTADNSRLALDGITLLVERLQ DLSRLINQFRY" misc_feature complement(628622..628906) /locus_tag="B565_0572" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(628619..628879) /locus_tag="B565_0572" /note="PAS fold; Region: PAS_3; pfam08447" /db_xref="CDD:117024" misc_feature complement(order(628697..628699,628712..628714, 628790..628801,628838..628840,628856..628858, 628868..628870)) /locus_tag="B565_0572" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(628670..628672,628676..628678, 628760..628765,628772..628774,628796..628798, 628808..628810)) /locus_tag="B565_0572" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(627407..628177) /locus_tag="B565_0572" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(627407..628036) /locus_tag="B565_0572" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(629098..629397) /locus_tag="B565_0573" /db_xref="GeneID:10486490" CDS complement(629098..629397) /locus_tag="B565_0573" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391225.1" /db_xref="GI:330828273" /db_xref="GeneID:10486490" /translation="MRYLILLSLLWTLPAQANSESQCQQEFVGWMLHQQQQFSDRKSD KMERRRAERAIELARQEYDKQASFCKTMQLVHEYKDDDPRLAPRKGEVHDFTPAS" gene complement(629516..631120) /locus_tag="B565_0574" /db_xref="GeneID:10486491" CDS complement(629516..631120) /locus_tag="B565_0574" /codon_start=1 /transl_table=11 /product="oligopeptide ABC superfamily ATP binding protein" /protein_id="YP_004391226.1" /db_xref="GI:330828274" /db_xref="GeneID:10486491" /translation="MKGWTPLLALLGCAAVQAADIPAGTQLAAEQIVVRHLKDEPASL SPLKLVGLPELQVLRDLFEGLLTQGPDGKPVAGVAASWENKGNQFFTFHLRPDARWSN GDPVKAGDFVYGWRKLVDPKEAATFAWFAQLARFDKVDEIVAGKLPVSELGVKALDDH TLQVTLSQPVPYFLNLLSHPSLSPLHQASIEQYGNQWTQPGKLVGNGAFVLNNRVVNE KLELTPNPYYWDRAHTVLTKVIFMPINQESAATNRYLAGDLHITESFPKEQYDKLKQQ IPNEVYTPDQLGTYYYAFNTKQAPLNDVRVRKALSYTIDRALIADKVLGTGEKPAYHF TPDVTASFTPAANLLSTSSQPALDSKAKALLKDAGYGPDKPLKLTLLYNTAEIHKKMA LAIASMWKQKLGAEVELTNQEWKTYLDSRQSGQFEVIRSSWVADYNDPSAFLGLWGSR HSGNMAGFANARYDQLLAEAASTQDAASRSKLFGEAEAILLDQAPIAPIYQYTNARLI KPWLKGYPINNPEDVAYSRQLYLVKH" misc_feature complement(629519..631102) /locus_tag="B565_0574" /note="oligopeptide ABC transporter substrate-binding protein OppA; Provisional; Region: PRK15104" /db_xref="CDD:185059" misc_feature complement(629528..631030) /locus_tag="B565_0574" /note="The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold; Region: PBP2_OppA; cd08504" /db_xref="CDD:173869" misc_feature complement(order(629615..629617,629813..629827, 629831..629833,629879..629881,630263..630265, 630332..630334,630956..630958)) /locus_tag="B565_0574" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173869" gene 631305..632012 /locus_tag="B565_0575" /db_xref="GeneID:10486492" CDS 631305..632012 /locus_tag="B565_0575" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391227.1" /db_xref="GI:330828275" /db_xref="GeneID:10486492" /translation="MKAWLLLACVLSQSAWALAPCQSDTAVGNWCEIGIDALHPTQGG VGQIQVDETQATLAGMSAKQLDKLMKKKEIPVVIAPDGSYWLVDRHHLTKALWQQGVK DARVKVIGRLQDKANFWSQMQNNHWAWLKDEKGQPLTPEQLPTRIDKLPDYPYRTLAG LLQNAGYFRKDKQVYFVEFAWASWLGKQMQWMPVDSANLAARLQQAKRLACGSDAKDL PGYPGKQCSLNQSKSAQ" misc_feature 631323..631976 /locus_tag="B565_0575" /note="Putative ParB-like nuclease; Region: ParBc_2; cl01772" /db_xref="CDD:120877" gene complement(632114..632773) /locus_tag="B565_0576" /db_xref="GeneID:10486493" CDS complement(632114..632773) /locus_tag="B565_0576" /codon_start=1 /transl_table=11 /product="isoleucine patch superfamily acetyltransferase" /protein_id="YP_004391228.1" /db_xref="GI:330828276" /db_xref="GeneID:10486493" /translation="MNPCQHWSQVEYLHLTVTNPNISLKGQHSYYSGAWDGPFEEVAV RYLHGDPFSRSPDTGWEPLWHIDRLHIGDYVQIAAGVKIIMGGNHTHNTAFISTYPFA DLAALKRSYRPAGDTRIGNDVWIGMEAMIMPGVTIGDGAIIAARSLVNQDVPPYAMVA GTPARVVRMRFGEEEIARLQALAWWDWRDQQVNDLLPLIQQGDVALLEQAAARWAERH E" misc_feature complement(632213..632620) /locus_tag="B565_0576" /note="Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and...; Region: LbH_XAT; cd03349" /db_xref="CDD:100040" misc_feature complement(order(632264..632266,632288..632290, 632336..632338,632393..632395,632402..632404, 632408..632410,632471..632473,632477..632479, 632483..632485,632504..632509,632546..632548, 632612..632614,632618..632620)) /locus_tag="B565_0576" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:100040" misc_feature complement(order(632273..632275,632285..632287, 632291..632296,632300..632302,632324..632326, 632339..632344,632393..632395,632402..632404, 632468..632470,632501..632503,632507..632512, 632606..632608,632612..632614)) /locus_tag="B565_0576" /note="active site" /db_xref="CDD:100040" misc_feature complement(order(632468..632470,632510..632512, 632606..632608,632612..632614)) /locus_tag="B565_0576" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100040" misc_feature complement(order(632273..632275,632285..632287, 632291..632296,632300..632302,632324..632326, 632339..632344,632378..632380,632393..632395, 632402..632404,632432..632434,632501..632503, 632507..632509)) /locus_tag="B565_0576" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:100040" gene 633060..633488 /locus_tag="B565_0577" /db_xref="GeneID:10486494" CDS 633060..633488 /locus_tag="B565_0577" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391229.1" /db_xref="GI:330828277" /db_xref="GeneID:10486494" /translation="MTPQSWQRYMLEAERAWQAGSLGAAICFYQQALGDVYEMTQVEL TELATMRVATCHRLADFWRAMDEPTYELRYLKLASELVTALVPQCPNRECEALISELG CCRGALLAFLKRHPNPEIARLIQLQDKVQGCELIGRFRLN" misc_feature 633075..633485 /locus_tag="B565_0577" /note="Protein of unknown function (DUF2753); Region: DUF2753; pfam10952" /db_xref="CDD:151399" gene complement(633506..634255) /locus_tag="B565_0578" /db_xref="GeneID:10486495" CDS complement(633506..634255) /locus_tag="B565_0578" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /protein_id="YP_004391230.1" /db_xref="GI:330828278" /db_xref="GeneID:10486495" /translation="MAPILIAEQQDGLLTLTLNRPDKRNALNTELYQQLVAALREAAA DEEVHVLLLQGQQDCFTAGNDLADFMGKSALEPDDPILQFLHTLADFPKPVIAAVAGP AVGIGTTILLHCDLVYLGDNARLLLPFVELGLVPEFASSLLLPRLVGHLKAAELLLLA EAMDAEEALRLGLANKVVAADGLLSFAREQGLKLAAKPPRALQKSKALLKQELKQAVH FVIDLEARAFAQALQGEEAQQRIAQKLKRRG" misc_feature complement(633545..634255) /locus_tag="B565_0578" /note="enoyl-CoA hydratase; Provisional; Region: PRK06688" /db_xref="CDD:180658" misc_feature complement(633674..634243) /locus_tag="B565_0578" /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase...; Region: crotonase-like; cd06558" /db_xref="CDD:119339" misc_feature complement(order(633860..633862,633869..633874, 633938..633946,633950..633952,634058..634072, 634082..634084,634178..634180,634184..634186)) /locus_tag="B565_0578" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(633938..633940,634064..634066)) /locus_tag="B565_0578" /note="oxyanion hole (OAH) forming residues; other site" /db_xref="CDD:119339" misc_feature complement(order(633674..633679,633686..633688, 633731..633733,633740..633742,633773..633775, 633782..633787,633791..633796,633800..633805, 633818..633823,633827..633835,633839..633841, 633857..633868,633902..633913,633974..633976, 633998..634000)) /locus_tag="B565_0578" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene 634346..634795 /locus_tag="B565_0579" /db_xref="GeneID:10486496" CDS 634346..634795 /locus_tag="B565_0579" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="YP_004391231.1" /db_xref="GI:330828279" /db_xref="GeneID:10486496" /translation="MFKRAFYSLLVLGMTAPALAKVEAVDGYVRLLPPGSPNTAAFMV LKNDADQPVKLVAAASAAAGRAELHTHLHENGVMKMRQVENIEIPAKGEAVLKPGSLH IMLFEVGTLSEQTPFPLTLTMDDGQQLDLSLPVKPIEPMAEMKHMKH" misc_feature 634421..634738 /locus_tag="B565_0579" /note="Protein of unknown function (DUF461); Region: DUF461; cl01071" /db_xref="CDD:194027" gene 634891..635523 /locus_tag="B565_0580" /db_xref="GeneID:10486497" CDS 634891..635523 /locus_tag="B565_0580" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391232.1" /db_xref="GI:330828280" /db_xref="GeneID:10486497" /translation="MKKTLIAGFVLALCSQSAMAADDWRFAAGADVWAAKGSGQAYGT SADGSYDDSYNWNGYLQLEHGIIFLPNAKFEVSDFSTSGGNFKNDLTAYDLSLYYRLF NNDLFKIDLGMTGRHYDGEQVYFGRKGYDEDTLMAYAGSEVKIPGTGIAFFGDLRTHD ADNYDYRLGGSYKFSSMPIKLRAGWREAKVDFANIDQSVDGWFMGGEFTF" gene 635555..636235 /locus_tag="B565_0581" /db_xref="GeneID:10486498" CDS 635555..636235 /locus_tag="B565_0581" /codon_start=1 /transl_table=11 /product="short chain dehydrogenase/reductase family oxidoreductase" /protein_id="YP_004391233.1" /db_xref="GI:330828281" /db_xref="GeneID:10486498" /translation="MGHIIVTGAGSGLGRALTIGLVERGHKVSMMGRRYQRLQEQEQL LGSAVIGIAADLAHHEEVDVAFAAAVEWGGQPDMVIHCAGVGEFGPVGVYTAEQIRRV VESNLISTILVAQQTVRLIGEKGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESL RAELKGSPLRLVNLYPSGIRSEFWDNSDHVDPSSFMTPEDAAAYMLDALEARSSCHVT DLFIGRNP" misc_feature 635555..636223 /locus_tag="B565_0581" /note="3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR; Region: KDSR-like_SDR_c; cd08939" /db_xref="CDD:187643" misc_feature 635561..636208 /locus_tag="B565_0581" /note="Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]; Region: FabG; COG1028" /db_xref="CDD:31231" misc_feature order(635576..635578,635582..635593,635648..635656, 635714..635722,635798..635806,635867..635869, 635945..635953,635990..635992,636002..636004, 636080..636091,636095..636100) /locus_tag="B565_0581" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187643" misc_feature order(635729..635731,635822..635830,635834..635836, 635849..635851,635861..635863,635885..635887, 635897..635899,635906..635911,635969..635980, 635984..635986,635993..635998,636005..636010, 636014..636022,636026..636034,636038..636043, 636062..636064,636152..636154,636164..636166, 636176..636178,636182..636187,636206..636223) /locus_tag="B565_0581" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:187643" misc_feature order(635870..635872,635951..635953,635990..635992, 636002..636004) /locus_tag="B565_0581" /note="active site" /db_xref="CDD:187643" misc_feature order(636056..636058,636062..636064,636152..636154, 636161..636166,636176..636178,636182..636184, 636206..636223) /locus_tag="B565_0581" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187643" gene complement(636330..638054) /locus_tag="B565_0582" /db_xref="GeneID:10486499" CDS complement(636330..638054) /locus_tag="B565_0582" /codon_start=1 /transl_table=11 /product="Prolyl-tRNA synthetase, family II" /protein_id="YP_004391234.1" /db_xref="GI:330828282" /db_xref="GeneID:10486499" /translation="MRTSQYLLSTLKETPSDAEVVSHQLMLRAGMIRKLASGMYAWLP TGLRVLKKIENIVREEMNNAGAVEVSMPVVQPAELWQESGRWDDYGPELCRLTDRHNR PFVLGPTHEEVITALVRYEVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDA YSFHIDKESLVDTYEKMHAAYCKAFTRMGLNFRPVQADTGSIGGTGSHEFQVLAESGE DLIAFSDSSDYAANIEMAEALAPAGERAAATAALTKVATPNVHTIDEVAAFLNVAPTA IAKTLLVLAEEDEHGKQAVIALVLRGDHELNEIKAEKLAGVANPLTFANDEQIKAAAG CDAGSIGPVGFAGRIIVDRSAAHLADFVCGANQTGFHLTGANWGRDIASYEVADLRNV VEGDPSPCGQGKLLLKRGIEVGHIFQLGTKYSEAMKASVLNEAGKSVTMEMGCYGIGV SRLVAAAIEQNNDQYGIIWPDAIAPFEVAIVPMNMHKSERVAEQAQQFYAELKAAGVD VLFDDRKERPGVMFADMELLGIPHAIVIGDRGLDNGVVEYKCRRTGEKQEVAISDIIA MLKAKLGR" misc_feature complement(636336..638054) /locus_tag="B565_0582" /note="prolyl-tRNA synthetase; Provisional; Region: PRK09194" /db_xref="CDD:181689" misc_feature complement(<637410..638006) /locus_tag="B565_0582" /note="Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation...; Region: ProRS_core_prok; cd00779" /db_xref="CDD:73229" misc_feature complement(order(637593..637595,637644..637646, 637704..637706,637758..637772,637776..637778, 637836..637841,637845..637853,637902..637904, 637923..637934,637953..637958)) /locus_tag="B565_0582" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73229" misc_feature complement(637836..637859) /locus_tag="B565_0582" /note="motif 1; other site" /db_xref="CDD:73229" misc_feature complement(order(637578..637580,637584..637586, 637590..637592,637599..637607,637629..637631, 637635..637637,637722..637724,637728..637730)) /locus_tag="B565_0582" /note="active site" /db_xref="CDD:73229" misc_feature complement(637629..637640) /locus_tag="B565_0582" /note="motif 2; other site" /db_xref="CDD:73229" misc_feature complement(636888..637379) /locus_tag="B565_0582" /note="INS is an amino acid-editing domain inserted (INS) into the bacterial class II prolyl-tRNA synthetase (ProRS) however, this CD is not exclusively bacterial. It is also found at the N-terminus of the eukaryotic/archaea-like ProRS's of yeasts and single-...; Region: ProRS-INS; cd04334" /db_xref="CDD:88585" misc_feature complement(order(636963..636965,637038..637043, 637218..637220)) /locus_tag="B565_0582" /note="putative deacylase active site [active]" /db_xref="CDD:88585" misc_feature complement(636675..>636842) /locus_tag="B565_0582" /note="Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it...; Region: class_II_aaRS-like_core; cl00268" /db_xref="CDD:193739" misc_feature complement(order(636699..636701,636708..636713, 636717..636722,636810..636812,636822..636827)) /locus_tag="B565_0582" /note="active site" /db_xref="CDD:29813" misc_feature complement(order(636699..636701,636708..636710)) /locus_tag="B565_0582" /note="motif 3; other site" /db_xref="CDD:29813" misc_feature complement(636348..636632) /locus_tag="B565_0582" /note="ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-...; Region: ProRS_anticodon_short; cd00861" /db_xref="CDD:29801" misc_feature complement(order(636408..636410,636414..636416, 636444..636446,636468..636470,636486..636488, 636603..636608)) /locus_tag="B565_0582" /note="anticodon binding site; other site" /db_xref="CDD:29801" gene 638329..639681 /locus_tag="B565_0583" /db_xref="GeneID:10486500" CDS 638329..639681 /locus_tag="B565_0583" /codon_start=1 /transl_table=11 /product="23S rRNA (Uracil-5-)-methyltransferase RumA" /protein_id="YP_004391235.1" /db_xref="GI:330828283" /db_xref="GeneID:10486500" /translation="MPLVGHQHQIEILELTDKGDGKGRLFDRPLFVEGLLPGEQALVE LTEVKPNYLHGKVAELLQPSADRVADFCPNTECGGCQVRPLAYPAQLKLKQALVQSAL EQVGLGDTPVKDILGMESPFAYRNKAQYAVRGCDAGAEIGFYRKHSHDLITADDCAVQ DPLHVELNARVRNWMREHNIAAYDEVNHSGCVRNLMTRKGFKSGELMVVLVTLGEALP FEAELLAALSDLPVTTLVQNINDERTNRILGATNRVLLGEGVIRDKIHELEFEISPLS FFQNNPTQTDVLYSSALEYAELTGNETVFDIYCGIGTISLFLAGKAAKVVGIESVESA ISDARRNAALNGIEHTEFHVGKAEQLMPELHAQGVTADVVVMDPPRKGCDKAVLQTLV AMAPRRLVYVSCNPQTLARDLAWLVKQGFVLDEVQPVDMFPHSMHVEAVARLSLPAKA " misc_feature 638353..639648 /locus_tag="B565_0583" /note="SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]; Region: TrmA; COG2265" /db_xref="CDD:32446" misc_feature 638356..638499 /locus_tag="B565_0583" /note="TRAM domain; Region: TRAM; cl01282" /db_xref="CDD:120537" misc_feature 639235..>639465 /locus_tag="B565_0583" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature order(639247..639267,639313..639318,639391..639399, 639457..639459) /locus_tag="B565_0583" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(639762..640331) /locus_tag="B565_0584" /db_xref="GeneID:10486501" CDS complement(639762..640331) /locus_tag="B565_0584" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="YP_004391236.1" /db_xref="GI:330828284" /db_xref="GeneID:10486501" /translation="MKKEILTLALLGLLAGCSSQPSLHYYSLDADSQQPVTAPAKPQH QLVLRPVALASQLDRISLVYQLEGQELHFTEYHRWAGALDDQLNRLTLNGLSTRLPGW VVRQDGARKGPVLTILVERFQGRHDGSAMLSGRWRLLAEDGTVLRDAPFRQERVLPAD GYNALVNELGQGWQQLLDQIAAEVRQSAR" misc_feature complement(639789..640250) /locus_tag="B565_0584" /note="Protein of unknown function (DUF330); Region: DUF330; cl01135" /db_xref="CDD:194047" gene complement(640328..641977) /locus_tag="B565_0585" /db_xref="GeneID:10486502" CDS complement(640328..641977) /locus_tag="B565_0585" /codon_start=1 /transl_table=11 /product="paraquat-inducible protein B" /protein_id="YP_004391237.1" /db_xref="GI:330828285" /db_xref="GeneID:10486502" /translation="MSERKKRWKPGSDFLSSAAAIWMVPLLALFIGLWMLFQHWYSQG PSFTLTVATAEGIVAGKTVIRSREVDVGRIEAVELSDDYSHAVLKGRLTNAASGMLRG DSQFWVVKPRVGREGVSGLSTLLSGAYIELAPGKKGRARDEYAMLDKPPLASLDAKGL RLTLSSRDTRALGEGSPINYQGFTIGQVEEAKFLPEKSEMQYQIFIHAPYDILVSSNS RFWMTPGFEVSMSSEGMKVKMDSLESLIDGGITMGLPPGWAPGEPVKQMEGFTLFQDE ASVLAGSLDQFIDYVFLFDDNVGGLHPGAAVQYRGIRVGTVISAPYLIEDKGVQIFKS RQIPVLARIEVQRLSHRYAKAEKDQWRALFGKQFKEGLRASLKTSSLLTGGKIIDLNF YPDAPRFEQAKLAGYQVFPTVQGGLDQIERKVNLILDKFVDMDMATTLTKVNGSLTTL DGTLKNISAVSANLNKLTAKDSTQQLPASLNESLKQLQETLQAYDAQSQTNQDLRQSV QTLNQLMRELQPLVHSLNEQPSSLIFDRAHPSDPEPKRGKQ" misc_feature complement(640331..641971) /locus_tag="B565_0585" /note="paraquat-inducible protein B; Provisional; Region: PRK10807" /db_xref="CDD:182747" misc_feature complement(641573..641851) /locus_tag="B565_0585" /note="mce related protein; Region: MCE; cl03606" /db_xref="CDD:186584" misc_feature complement(640802..641116) /locus_tag="B565_0585" /note="mce related protein; Region: MCE; cl03606" /db_xref="CDD:186584" gene complement(641970..643241) /locus_tag="B565_0586" /db_xref="GeneID:10486503" CDS complement(641970..643241) /locus_tag="B565_0586" /codon_start=1 /transl_table=11 /product="paraquat-inducible protein A" /protein_id="YP_004391238.1" /db_xref="GI:330828286" /db_xref="GeneID:10486503" /translation="MHPVSHQHHTTYVHDATACEECDLLIPATPLEVGQASCCPRCGH TLSRHLPQQELRPISYGFAALIMFVLANAFTFMSFSAKGVGQEMTFLQSITTLVDEGY LFLGAVLSLTLIGLPLVYMGSIMLVLWRVDKDLHSNALRSLGRLLCRIKPWLMVDVFL VGVLISLVKLMGMADIKMGLSFWAFVGYTVLLIKMISSLDQMWLWQRLFGPTESRDID PEAGALESGLVGCHICGALSEVGSHSCSRCGGKLHARKPGGLNRTWALLFTSAILYIP ANVYPIMDTVFLGDDSPSTILGGVVLLWAMGSYPIAAVIFFASVVVPLVKILALFWLC YMVQRGNVTSPLGKLKLYRMTEFVGRWSMIDVFVVAILAGLIRLDNLMTIYPGPAAVA FAGVVLITMVAAMSFDSRLIWDLQQGERERE" misc_feature complement(642000..643229) /locus_tag="B565_0586" /note="paraquat-inducible membrane protein A; Provisional; Region: PRK15103" /db_xref="CDD:185058" misc_feature complement(642618..643076) /locus_tag="B565_0586" /note="Paraquat-inducible protein A; Region: PqiA; pfam04403" /db_xref="CDD:190970" misc_feature complement(641982..642464) /locus_tag="B565_0586" /note="Paraquat-inducible protein A; Region: PqiA; pfam04403" /db_xref="CDD:190970" gene 643418..643777 /locus_tag="B565_0587" /db_xref="GeneID:10486504" CDS 643418..643777 /locus_tag="B565_0587" /codon_start=1 /transl_table=11 /product="Hfq protein" /protein_id="YP_004391239.1" /db_xref="GI:330828287" /db_xref="GeneID:10486504" /translation="MTTESPSYSTIEQAFSLGNGQDSALNWLRKNRSQVAIFLVSGIK LEGTISGFDQYSVLLTDAHGNQQLVYKAKISTIAMHTGRPQVSIQRARKPRVSMAPRP HGAPGRYDDNQGGGNNE" misc_feature 643481..643660 /locus_tag="B565_0587" /note="The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members...; Region: Sm_like; cl00259" /db_xref="CDD:193733" misc_feature order(643520..643540,643544..643597) /locus_tag="B565_0587" /note="Sm1 motif; other site" /db_xref="CDD:99752" misc_feature order(643529..643531,643535..643540,643544..643546, 643550..643552,643568..643570,643589..643591, 643613..643621,643625..643630,643634..643651) /locus_tag="B565_0587" /note="D3 - B interaction site; other site" /db_xref="CDD:99752" misc_feature order(643529..643531,643535..643537,643547..643549, 643628..643630,643637..643651) /locus_tag="B565_0587" /note="D1 - D2 interaction site; other site" /db_xref="CDD:99752" misc_feature order(643532..643540,643574..643576,643616..643633, 643637..643651) /locus_tag="B565_0587" /note="Hfq - Hfq interaction site; other site" /db_xref="CDD:99752" misc_feature order(643574..643576,643580..643582,643625..643627) /locus_tag="B565_0587" /note="RNA binding pocket [nucleotide binding]; other site" /db_xref="CDD:99752" misc_feature 643613..643648 /locus_tag="B565_0587" /note="Sm2 motif; other site" /db_xref="CDD:99752" gene complement(643910..644500) /locus_tag="B565_0588" /db_xref="GeneID:10486505" CDS complement(643910..644500) /locus_tag="B565_0588" /codon_start=1 /transl_table=11 /product="CbbY family protein" /protein_id="YP_004391240.1" /db_xref="GI:330828288" /db_xref="GeneID:10486505" /translation="MTLSGFQGLVFDLDGTLVDSMPLHLAAWEHTAREFGFHFDADWF YELGGMPSRKIALLVAQEQQIPLDPLEVTRCKTAHYVANLHKATVFPAMQALVERYHG VIPMGIGTGSPRINAEAVLRNTGLDRYFSVVVTADDVELHKPNPDTFLLVASKLGVEP SGCLVFEDTGIGVQAGEAAGMQTCMVKEGQPVGITA" misc_feature complement(643943..644485) /locus_tag="B565_0588" /note="beta-phosphoglucomutase family hydrolase; Region: PGMB-YQAB-SF; TIGR02009" /db_xref="CDD:162658" misc_feature complement(643943..644272) /locus_tag="B565_0588" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature complement(644171..644173) /locus_tag="B565_0588" /note="motif II; other site" /db_xref="CDD:119389" gene complement(644567..645670) /locus_tag="B565_0589" /db_xref="GeneID:10486506" CDS complement(644567..645670) /locus_tag="B565_0589" /codon_start=1 /transl_table=11 /product="sensory box/GGDEF family protein" /protein_id="YP_004391241.1" /db_xref="GI:330828289" /db_xref="GeneID:10486506" /translation="MLLRRYPIFNRRLALVAYGIDYQLSSPVEWPSLAQHCRLLAQGR QYLVPFTHEQLDEQRPMLLDQDAIPLVEASSERQPNSFPVLEQWRDSRRRLAVHGANR DPRWLGASRLLVYWMGEEGICQPTEHKRMALNIETWADFLPLREAGVDFFAGGFLARP ELVNQRANQPDMALVQQILQLICHEEFSFAQVARLLEQDAWLPGLLLTYVNAPGFDHA APITSVPRALSYLGEQEIRKFVLINGLARVSQHMPEACTRMAIARGRFCELIALTALG KAEASWAFLVGLVLDGSLLSEPLMAHLPKSVQRAIELHEGPLFHLFQLVSTYEQGNWA LLEQLAPKYQLDPAQLTPVYFQSQMWGQAFLTS" misc_feature complement(644573..645667) /locus_tag="B565_0589" /note="Predicted signal transduction protein containing EAL and modified HD-GYP domains [Signal transduction mechanisms]; Region: COG3434" /db_xref="CDD:33240" misc_feature complement(<644858..645151) /locus_tag="B565_0589" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" gene complement(645675..647315) /locus_tag="B565_0590" /db_xref="GeneID:10486507" CDS complement(645675..647315) /locus_tag="B565_0590" /codon_start=1 /transl_table=11 /product="GGDEF family protein" /protein_id="YP_004391242.1" /db_xref="GI:330828290" /db_xref="GeneID:10486507" /translation="MQEWDPEHFTNFAQLCEVSLATIREKTDAERLYLWLKAPEPQLY SFQLDQGLTTLDLAHLGQLTLPHHLIDKAMEKGQLVIEQLQAPPDPGENVEPAQPQLR ACFPLKRHMKLEGVIYLETRRRIDRLSSHQRQGIQLLIHYLTAELSNHLLSSQVNQER DQRLHTQTDLVQSQALQGSFLTMLQALHMVSVTLSRSRSENDLLRDAVLLARKELQFD RVAIFLIEPDGKTMRGTWGTSEEGELMDEHNFISPIPDHPTVQEALRRKDYVLVMEDT PLYYEKQQVGRGWNAMVSLWDGTTPIGWIAADNLLWHRPLKAYQSEIFKQYAAILSQL LIRQRTQEQLETLNRQLEARVAERTMQLAETNRALEEANHRLSLLSLEDPLTGIANRR QWDITMQREWEWARRTQNLLAVLMIDVDEFKAYNDHFGHAKGDLCLQQVAHVLRDAER RCTNLVARYGGEEFVILLCAPQPGEAEQLAGRIHDGLARLKMPHPASRVADFITVSIG FSYLVPSLDGAWQTLTEQADQALYHAKSQGRARTLAYR" misc_feature complement(646281..646712) /locus_tag="B565_0590" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" misc_feature complement(<646152..>646286) /locus_tag="B565_0590" /note="two component system sensor kinase SsrA; Provisional; Region: PRK15347" /db_xref="CDD:185245" misc_feature complement(645693..646169) /locus_tag="B565_0590" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(645930..645932,646062..646064)) /locus_tag="B565_0590" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(645927..645938,645942..645944, 646011..646013,646023..646025,646035..646040, 646047..646049)) /locus_tag="B565_0590" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(645870..645872,645954..645956)) /locus_tag="B565_0590" /note="I-site; other site" /db_xref="CDD:143635" gene complement(647570..649606) /locus_tag="B565_0591" /db_xref="GeneID:10486508" CDS complement(647570..649606) /locus_tag="B565_0591" /codon_start=1 /transl_table=11 /product="Exoribonuclease II" /protein_id="YP_004391243.1" /db_xref="GI:330828291" /db_xref="GeneID:10486508" /translation="MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSY FVPPPYMKKVMHGDRVTALIRTEKEKEVAEPDTLLEQSVTRFVARVKMFRDRLNVVAD HPLIKDAIKARVKKGLDEKEFKEGDWVVATLKRHALVDGNFSAEIIQKIAAQEDHNVP WWVVLARHNLAQVEPADLPEWKVIEEEELPRRDLTKVPFFTIDGAKTKDMDDALAITK LDNGWELLVAIADPTAYVAEGSELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKE GEERNTLCARLLIAEDGLLLEETEFFAARICSHARLNYDDVSDWAEHGKELSIDAGVL AQLPLMKAMTEARIAWRTEHALVFPDRPDYDFELGENGEVLAIHVEPRRIANRMVEES MIAANICAGRVLGKSVGYGIFNVHTGFDEESLDGAIDLLKSAEAPFERDEIASLSGFC ALRRWIDNLDTRWLDGKIRRFQSYALMSSEPGAHYGLGLDAYATWTSPIRKYGDMVNH RLLKAVIAGKTPGERPSTELTEHLTACRRLHRMVERDIGDWLYVRYLKAAAGTDQVFN AEIIDVMRAGLKLRLQENGAVVFMPARHILDNKDRLECNWDNGRVYLDKTEVVYELGQ LIEVKLTEAVEETRSLIAKPAVGLVPGPAPEAPAAESAPADSSETPAEAAPKAE" misc_feature complement(647672..649606) /locus_tag="B565_0591" /note="exoribonuclease II; Provisional; Region: PRK05054" /db_xref="CDD:179920" misc_feature complement(649367..649537) /locus_tag="B565_0591" /note="S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain...; Region: S1_like; cl09927" /db_xref="CDD:195927" misc_feature complement(648062..649036) /locus_tag="B565_0591" /note="RNB domain; Region: RNB; pfam00773" /db_xref="CDD:189712" gene complement(649706..650605) /locus_tag="B565_0592" /db_xref="GeneID:10486509" CDS complement(649706..650605) /locus_tag="B565_0592" /codon_start=1 /transl_table=11 /product="transcriptional regulator ArgP" /protein_id="YP_004391244.1" /db_xref="GI:330828292" /db_xref="GeneID:10486509" /translation="MKELDYKLLRALDAVLQEQNFDRAAKSLHITQSAISQRIKQLEQ QFAEPLLIRSQPLQATSLGQKLLAHYRQVHQLELELAGELTPDQPQGPIRISIAVNAD SLATWFLPAIAPLLKLHPIELNLLVDDESRTLDKVREGQAFGAVSLHPQPLAGCCVDE LGEMNYLLTASPTFVARHFPAGLTREALAKAPAVAFDQRDDMHVSFMREHFGLEPGGY PCHTVHSSEAFVAMAEQGLAYCLIPELQIRGQLAGGSLLNLSPDHVLTERLYWHRWVL EKGVHKQLSQRLIDHASSQLKPR" misc_feature complement(649718..650599) /locus_tag="B565_0592" /note="chromosome replication initiation inhibitor protein; Validated; Region: PRK03635" /db_xref="CDD:179616" misc_feature complement(650414..650587) /locus_tag="B565_0592" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(649742..650326) /locus_tag="B565_0592" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator, ArgP (IciA), for arginine exporter (ArgO); contains the type 2 periplasmic binding fold; Region: PBP2_IciA_ArgP; cd08428" /db_xref="CDD:176119" misc_feature complement(order(649901..649906,649910..649915, 649931..649948,650219..650239,650246..650248, 650258..650260,650267..650272,650276..650281)) /locus_tag="B565_0592" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176119" gene complement(650807..651295) /locus_tag="B565_0593" /db_xref="GeneID:10486510" CDS complement(650807..651295) /locus_tag="B565_0593" /codon_start=1 /transl_table=11 /product="LuxI-like protein" /protein_id="YP_004391245.1" /db_xref="GI:330828293" /db_xref="GeneID:10486510" /translation="MLIEDEQGLCGCIRLLNCADAYMLPTIFPTALAGESAPRTPDVW ELTRLAIDAQRAPRMSNGVSELTCVIFREVYAFAHAHGIRELVAVVSLPVERIFRRLG LPIERLGHRQAVDLGAVRGVGIRFHLDERFAQAVSQPLLGHYQTSHYPPQQPSPVLAV HS" misc_feature complement(650906..>651295) /locus_tag="B565_0593" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene 651496..652302 /locus_tag="B565_0594" /db_xref="GeneID:10486511" CDS 651496..652302 /locus_tag="B565_0594" /codon_start=1 /transl_table=11 /product="LuxR-like protein" /protein_id="YP_004391246.1" /db_xref="GI:330828294" /db_xref="GeneID:10486511" /translation="MSGQGGFHMNRDQLLEYLEHFTSVTDGNRLAELIGRFTLGMGYD YYRFALILPMSMQRPKVVLFNQCPDSWVQAYTENNMLACDPVIRLARKQTLPIYWNRL DERASFLQEGTMDVMGLAAEFGLRNGISFPLHGAAGENGILSFITSERASSDLLLESS PILSWMSNYIFEAAIRVVRFSMMDSAGKDPLTERETECLFWASEGKTSSEIACILGIT ERTVNYHLNQVTRKTGSMNRYQAIAKGVSTGLLLPNLEQVVVTNFPRLLQ" misc_feature 651514..652248 /locus_tag="B565_0594" /note="DNA-binding transcriptional activator SdiA; Provisional; Region: PRK10188" /db_xref="CDD:182292" misc_feature 651583..652017 /locus_tag="B565_0594" /note="Autoinducer binding domain; Region: Autoind_bind; pfam03472" /db_xref="CDD:190651" misc_feature 652066..652236 /locus_tag="B565_0594" /note="C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors...; Region: LuxR_C_like; cd06170" /db_xref="CDD:99777" misc_feature order(652069..652077,652114..652122,652144..652149, 652153..652158,652162..652176,652207..652209) /locus_tag="B565_0594" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:99777" misc_feature order(652102..652104,652108..652110,652114..652116, 652207..652215,652222..652224,652231..652236) /locus_tag="B565_0594" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:99777" gene 652507..653118 /locus_tag="B565_0595" /db_xref="GeneID:10486512" CDS 652507..653118 /locus_tag="B565_0595" /codon_start=1 /transl_table=11 /product="putative amino-acid transporter yggA" /protein_id="YP_004391247.1" /db_xref="GI:330828295" /db_xref="GeneID:10486512" /translation="MMLATTLQGFTIGLAMIIPIGAQNAFVLSRGIHRNHHLLTATLC SFCDLTLIAIGVFGGANVLAASPLGMALLTWGGVLFLGWFGGRSLLSAWRGKGEGLAD SAQQMGAKSVLAMTLGVTLLNPHVYLDTLMLLGSLGSQVSESLRPAFAAGAMLASLVW FYSLALGAAALTPWLARGRVQQGIDLLVGIIMLSLAVQLAIGR" misc_feature 652552..653082 /locus_tag="B565_0595" /note="LysE type translocator; Region: LysE; cl00565" /db_xref="CDD:186083" gene complement(653200..655209) /locus_tag="B565_0596" /db_xref="GeneID:10486513" CDS complement(653200..655209) /locus_tag="B565_0596" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004391248.1" /db_xref="GI:330828296" /db_xref="GeneID:10486513" /translation="MKIVTTSNLGLAILLGCTLGMGVVGWYGSQRLANLLSYVLGAAW QTADGAMEGSIELGNQQLQIQKMQNGTPLNRAELDAAKAATDDALARVSQGQLIDGAA LATMEQHKQGYQQQQEKLLALYHAYTEVDQALHHNADLMARLSTQLEVIGDGAVEALT QSPDQTISWNSGLSTRWEAADGGMESNIGFLRQLYALEKMRRQGVTEAIKAELKEATD FYHEAVDSMLGTGLFDIEGTGEFAGKTLSAEYRALLARHQQLMGQWVDALGSYQAQQS AYEVSADELRQQLVAIEESGDATVEDQVAQLNGIISQTRTLLLGGLLLSLIMVTLCGF WLTRKLVTPLLQVDKRMQDIAAGEGDLNARINLQRDDEIGSLANSVDRFIEKLQKMIS STMDNNQHISEHVHTSVNRVEAISQSSRQTAEHALALHHDSEQMVQVATGISDNCSMA AHNANEVRQLTTESSQYVTSASAGMQRVVQEVSECAIAINSLKEQAGQIGQIISTISG ISEQTNLLALNAAIEAARAGEMGRGFAVVADEVRTLANRTATSSAEISQVISSIQQQT ETAYLMMQRNLKTVESGMQDSENTKQILFKVEGAIDQLADMVQQVAVATGQLSHTLSH SSDKVSGISLQARTGEQEAQECLQLASSLHQASLLQQRLLSQFRV" misc_feature complement(653275..654429) /locus_tag="B565_0596" /note="Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:31182" misc_feature complement(654043..654231) /locus_tag="B565_0596" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(653311..>653604) /locus_tag="B565_0596" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 655395..656084 /locus_tag="B565_0597" /db_xref="GeneID:10486514" CDS 655395..656084 /locus_tag="B565_0597" /codon_start=1 /transl_table=11 /product="Holliday junction ATP-dependent DNA helicase ruvA" /protein_id="YP_004391249.1" /db_xref="GI:330828297" /db_xref="GeneID:10486514" /translation="MLDTYPVILYAMSQFTNSCIGEERAVIGRLRGIVIEKQPPEVLL EVGGVGYEVQMPMSCFYDLPEIGKEATIHTHFVVREDAQLLYGFNHKQERALFRELIK TNGVGPKLALAILSGMTATQFVLSVEREEISSLVKLPGVGKKTAERLVVEMKDRLKGW VSHDLFSPAMVTLPASEPELRAPDVTEEAASALVALGYKPQQASQIVSKIAKEGMSVE DIIRESLRSLV" misc_feature 655473..656078 /locus_tag="B565_0597" /note="Holliday junction DNA helicase RuvA; Reviewed; Region: ruvA; PRK00116" /db_xref="CDD:178876" misc_feature 655473..655655 /locus_tag="B565_0597" /note="RuvA N terminal domain; Region: RuvA_N; pfam01330" /db_xref="CDD:110340" misc_feature 655944..656078 /locus_tag="B565_0597" /note="RuvA, C-terminal domain; Region: RuvA_C; pfam07499" /db_xref="CDD:148866" gene 656093..657103 /locus_tag="B565_0598" /db_xref="GeneID:10486515" CDS 656093..657103 /locus_tag="B565_0598" /codon_start=1 /transl_table=11 /product="Holliday junction ATP-dependent DNA helicase ruvB" /protein_id="YP_004391250.1" /db_xref="GI:330828298" /db_xref="GeneID:10486515" /translation="MIEADRLISASAAREDDIIDRAIRPKKLADYTGQDTVCEQMEIF IEAARQRGEALDHLLIFGPPGLGKTTLANIVANEMGVNIKTTSGPVLEKAGDLAALLT NLEPNDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGA TTRAGSLTSPLRDRFGIVQRLEFYNVKDLTDIVSRSARCLGLDMTEDGAIEVARRSRG TPRIANRLLRRVRDFAQVKSDGRIDGPIAARAMDMLDVDNEGFDFMDRKLLLAVIDKF MGGPVGLDNLAAAIGEEKDTIEDVLEPYLIQQGYLQRTPRGRIATTRAYAHFGLQRPD EK" misc_feature 656108..657085 /locus_tag="B565_0598" /note="Holliday junction DNA helicase RuvB; Reviewed; Region: ruvB; PRK00080" /db_xref="CDD:178847" misc_feature 656213..656626 /locus_tag="B565_0598" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 656276..656299 /locus_tag="B565_0598" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(656279..656302,656429..656431,656576..656578) /locus_tag="B565_0598" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 656417..656434 /locus_tag="B565_0598" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 656612..656614 /locus_tag="B565_0598" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 656861..657085 /locus_tag="B565_0598" /note="Holliday junction DNA helicase ruvB C-terminus; Region: RuvB_C; pfam05491" /db_xref="CDD:191283" gene 658038..659594 /locus_tag="B565_0599" /db_xref="GeneID:10486516" CDS 658038..659594 /locus_tag="B565_0599" /codon_start=1 /transl_table=11 /product="cytochrome d ubiquinol oxidase subunit I" /protein_id="YP_004391251.1" /db_xref="GI:330828299" /db_xref="GeneID:10486516" /translation="MIAEHVVDLSRFQFAATALYHFLFVPLTLGMAFLLAIMESVYVM TNNTIYRDMTKFWGKLFGINFALGVTTGLAMEFQFGTNWAYYSHYVGDIFGAPLAIEG LMAFFLESTFVGMFFFGWDRLSKHQHLAATWLMALGTNLSALWILVANGWMQNPVGAE FNFESMRMEMMSFADVVLNPVAQVKFVHTVAAGYTCGAMFVLGISSYYLLKNRDVAFA RRSFAIAAAFGMASIVSVLILGDESGYETGEVQKVKLAAIEAEWETEPAPAAFTLFGI PNQEEMRTDYAIKIPYALGIIATRSLDGQVTGLKDLKSEHELRVRNGMTAYDLLTKLQ SGDKSDETRARFDEVKQDLGYGLLLKRYTSNVTDATDEQIKAAVDDSIPQVLPLFFAF RIMVAVGMLMLVLIGMAFYDSARHQIGKRKWLLKGLLWGIPLPWIAIEAGWFVAEYGR QPWTIAEVLPTSLSASNLPAAEIWFSLIGICLFYTVLLVIEMYLMFKYARLGPSSLKT GKYHFEQIKA" misc_feature 658053..659582 /locus_tag="B565_0599" /note="Bacterial Cytochrome Ubiquinol Oxidase; Region: Bac_Ubq_Cox; cl00562" /db_xref="CDD:193871" gene 659606..660742 /locus_tag="B565_0600" /db_xref="GeneID:10486517" CDS 659606..660742 /locus_tag="B565_0600" /codon_start=1 /transl_table=11 /product="cytochrome d ubiquinol oxidase subunit II" /protein_id="YP_004391252.1" /db_xref="GI:330828300" /db_xref="GeneID:10486517" /translation="MFDYETLRVIWWALVGVLLIGFAITDGFDMGVGALLPFVGKKDV ERRVMLNTMGPHWEGNQVWLVTAGGALFAAWPMVYAATFSGFYIAMILTLMALFLRPV GFKYRSLRADAKWRSNWDWALFAGSAVPPIVFGVAFGNLLQGVPFEFNQFMMLTYHGN FFGLLNPFGILAGLVSLFMLLTQGATWLMMKTDGEVLARSRTAAMICSLLTLVLFAAA GWWVSGMEGYVIVKAAATDAVSNPMNKEVVLQAGAWMNNYTLYPWMVAAPVLGLAMSL LTALFARMNIGWLAFTSSSLAIAGVILTAGFSMFPFVMPSSLEPSLSLTMWDATASFN TLQVMTVAAAIFVPIVLGYTIWTYIKMFGRVTNKHIEDNQQSLY" misc_feature 659606..660739 /locus_tag="B565_0600" /note="cytochrome d ubiquinol oxidase subunit 2; Provisional; Region: PRK15003; cl12219" /db_xref="CDD:187194" misc_feature 659621..660679 /locus_tag="B565_0600" /note="Cytochrome oxidase subunit II; Region: Cyto_ox_2; pfam02322" /db_xref="CDD:190279" gene 660757..660873 /locus_tag="B565_0601" /db_xref="GeneID:10486518" CDS 660757..660873 /locus_tag="B565_0601" /codon_start=1 /transl_table=11 /product="Cyd operon protein YbgT" /protein_id="YP_004391253.1" /db_xref="GI:330828301" /db_xref="GeneID:10486518" /translation="MWYFTWILGLLLACAFGIINALWLEHTENMDRQIDENK" misc_feature 660757..660840 /locus_tag="B565_0601" /note="Membrane bound YbgT-like protein; Region: YbgT_YccB; cl02039" /db_xref="CDD:154718" gene 660977..661171 /locus_tag="B565_0602" /db_xref="GeneID:10486519" CDS 660977..661171 /locus_tag="B565_0602" /codon_start=1 /transl_table=11 /product="protein YbgE" /protein_id="YP_004391254.1" /db_xref="GI:330828302" /db_xref="GeneID:10486519" /translation="MIAANTSEHGLWLAPWLMWAVCCGVLNGLGFHLKSLPGRVLFNP WLAWPSLLYGLWLTHSYFLS" misc_feature <660980..661147 /locus_tag="B565_0602" /note="Cyd operon protein YbgE (Cyd_oper_YbgE); Region: Cyd_oper_YbgE; cl11451" /db_xref="CDD:187047" gene 661277..661684 /locus_tag="B565_0603" /db_xref="GeneID:10486520" CDS 661277..661684 /locus_tag="B565_0603" /codon_start=1 /transl_table=11 /product="acyl-CoA thioester hydrolase YbgC" /protein_id="YP_004391255.1" /db_xref="GI:330828303" /db_xref="GeneID:10486520" /translation="MGEVFEFPVRVYYEDTDAGGIVYNANYLKFMERARTEFLRAKGV EQDVWLKEGYAFVVSRTEIDFRSAARFNELLNVLTQVIEVKRASLRFSQQILAADGRL ITQAMVQIACVSHPQMKPVAIPEKIKGVLLSAR" misc_feature 661289..661618 /locus_tag="B565_0603" /note="4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active...; Region: 4HBT; cd00586" /db_xref="CDD:48031" misc_feature order(661370..661372,661442..661444,661448..661450, 661529..661540) /locus_tag="B565_0603" /note="active site" /db_xref="CDD:48031" gene 661674..662363 /locus_tag="B565_0604" /db_xref="GeneID:10486521" CDS 661674..662363 /locus_tag="B565_0604" /codon_start=1 /transl_table=11 /product="protein TolQ" /protein_id="YP_004391256.1" /db_xref="GI:330828304" /db_xref="GeneID:10486521" /translation="MHAEISFIGLFWQASLLVKLVMMTLMSMSIVSWALIIQRSKAIK AANLASEQFEDRFWSGVDLNRLYQESSSRRDDIEGMEDIFYSGFKEYARLLKAGARGQ DAVMDGTYRAMRVSLSRAVDDLESNLPVLATIGSISPYIGLFGTVWGIMNAFIALGQV QQATLQMVAPGIAEALIATAMGLFAAIPAVIFYNRFSNKVERLENAYANFMDEFTTIL NRQIAQQQGDQ" misc_feature 661689..662333 /locus_tag="B565_0604" /note="MotA/TolQ/ExbB proton channel family; Region: MotA_ExbB; cl00568" /db_xref="CDD:186086" misc_feature 661701..662345 /locus_tag="B565_0604" /note="Biopolymer transport proteins [Intracellular trafficking and secretion]; Region: TolQ; COG0811" /db_xref="CDD:31153" gene 662363..662809 /locus_tag="B565_0605" /db_xref="GeneID:10486522" CDS 662363..662809 /locus_tag="B565_0605" /codon_start=1 /transl_table=11 /product="Biopolymer transport protein" /protein_id="YP_004391257.1" /db_xref="GI:330828305" /db_xref="GeneID:10486522" /translation="MQTYQRIRRKKVAEINVVPYIDVMLVLLIIFMAVTPVITQGVKV DLPQAESEQLPEDAKPPFIVSVNTEGEYVIKAGEADDEPVPSGTPEAMQQYITEKAMG YLAINQNAPVVVAGDKAVRYEEVILLMVALKKAGVPQVGLMTDPVN" misc_feature 662396..662797 /locus_tag="B565_0605" /note="Biopolymer transport protein ExbD/TolR; Region: ExbD; cl00537" /db_xref="CDD:193858" gene 662815..663948 /locus_tag="B565_0606" /db_xref="GeneID:10486523" CDS 662815..663948 /locus_tag="B565_0606" /codon_start=1 /transl_table=11 /product="TolA protein" /protein_id="YP_004391258.1" /db_xref="GI:330828306" /db_xref="GeneID:10486523" /translation="MDVKRGISGYLIASFLLHLIIGIILFVGLDFSKPKRPESKGQIV NAVMLDENFLNEQAKQIQQQKSQPKPQKVEKEKDKEDTDLAKRELAQKQEQLRIAETK RKQAEEATRKAEAEKQKKVAEQKQAEEKAQKAEEARKLEEQKAKKAEAERKAAEAESK ALALKKKKEQEKKEAEEKAKAAEAKAKKAEADKKAKAEAEKKAKAEAEKKAKAEAEKK AKEEAEKKAKADAEKKAKAEAEKQAKIAAERKRKAAEQAKLQKEMEEMMQQQLSAEAN ARSQAASAAAQGEVDKYAALIKATVERYMILDPTMRGKTCTIGVRLASSGFVISVDNG QGDPAVCRSGKAAVLKANQLPVPKDPAAFEMLKEFNLKLEPSI" misc_feature 663673..663927 /locus_tag="B565_0606" /note="TolA C-terminal; Region: TolA; pfam06519" /db_xref="CDD:148245" gene 664044..665369 /locus_tag="B565_0607" /db_xref="GeneID:10486524" CDS 664044..665369 /locus_tag="B565_0607" /codon_start=1 /transl_table=11 /product="protein tolB" /protein_id="YP_004391259.1" /db_xref="GI:330828307" /db_xref="GeneID:10486524" /translation="MIRKVFFALVGCLLLGQSAQAALDIVITGGIDSARPIAVAPFKW EGNGQLPQDIAEVVSNDLMRSGKFKPLARGQMPQTPSSSSEINFAPWASQGVEAVVVG SISAVGDGTYKVNFELVDVLKGQLAKAQGGESNGYILDSRMATIPGAQMRQFAHRISD IVYERLTGERGAFLTRLAYVSVQQGTQFPYQLRISDYDGYNEKTLLRSREPLMSPAWS PDGSKLAYVSFENQKSEIYVQDIYTQQRSLITSFRGINGAPEWSPDGRRLAIVLSKDG SPNLYVVDVASKQLTRVTTSRVIDTEPSWMPDGQNLLFTSERGGKPQIYSVNLATGMT RRMTWEGESNQGASITPDGKIMVMVTRVQGQYRIARQDMENNALLVLTQSALDESPSV APNGSMIIYATIYQGRKSLALVSTDGRFKAVLPTSSGEIRAPAWSPFLN" misc_feature 664044..665363 /locus_tag="B565_0607" /note="translocation protein TolB; Provisional; Region: tolB; PRK04792" /db_xref="CDD:179879" misc_feature 664110..664421 /locus_tag="B565_0607" /note="TolB amino-terminal domain; Region: TolB_N; pfam04052" /db_xref="CDD:190844" misc_feature 664650..664757 /locus_tag="B565_0607" /note="WD40-like Beta Propeller Repeat; Region: PD40; pfam07676" /db_xref="CDD:191808" misc_feature 664779..664889 /locus_tag="B565_0607" /note="WD40-like Beta Propeller Repeat; Region: PD40; pfam07676" /db_xref="CDD:191808" misc_feature 664911..665018 /locus_tag="B565_0607" /note="WD40-like Beta Propeller Repeat; Region: PD40; pfam07676" /db_xref="CDD:191808" gene 665419..665943 /locus_tag="B565_0608" /db_xref="GeneID:10486525" CDS 665419..665943 /locus_tag="B565_0608" /codon_start=1 /transl_table=11 /product="peptidoglycan-associated lipoprotein" /protein_id="YP_004391260.1" /db_xref="GI:330828308" /db_xref="GeneID:10486525" /translation="MQLNKLLKGLAIALPLFTLAACSSSSDSDAAGAESGMTDGMGGV QTGGANGMLSPEEQMRQKFEALQRDNVIYFPFDGYDIQGQYADLLDAHASYLRERPSV KVLIEGHADERGTPEYNIALGERRAKAVAKYLQTLGVQAEQLSIVSYGEEKPLDMSHT EDAFAKNRRAVLVY" misc_feature 665419..665940 /locus_tag="B565_0608" /note="peptidoglycan-associated outer membrane lipoprotein; Provisional; Region: PRK10802" /db_xref="CDD:182744" misc_feature 665629..665937 /locus_tag="B565_0608" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature order(665644..665649,665746..665751,665758..665760, 665770..665775,665782..665784,665908..665910, 665920..665922) /locus_tag="B565_0608" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene 666111..666902 /locus_tag="B565_0609" /db_xref="GeneID:10486526" CDS 666111..666902 /locus_tag="B565_0609" /codon_start=1 /transl_table=11 /product="TPR domain-containing protein" /protein_id="YP_004391261.1" /db_xref="GI:330828309" /db_xref="GeneID:10486526" /translation="MYKQAVVALAVMVVLNAQAAAPVSDLGGDSGGGVVLSGNNGAIV PTGSLEDRVALLERTLNARLRLQAELQQQVDSLQGEVSELRGQLEQQTYQMEQSQERQ RQLYQELDKVASSQQAAPAAPAPAAATPAAAANYSTNQDENQAYDAAVNMVLKEKNYD KAIPAFQGFIKQYPNSGYVPNAHYWLGQLLFNKGDRAGASAQFSTVANKYSKSPKRAD ALLKLGMLAQLDGKKTEAKSFYEQVIKGYPNTSPAQLAKQSLAKL" misc_feature 666240..666899 /locus_tag="B565_0609" /note="tol-pal system protein YbgF; Provisional; Region: PRK10803" /db_xref="CDD:182745" misc_feature 666561..666857 /locus_tag="B565_0609" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature order(666561..666566,666660..666665,666669..666674, 666681..666686,666771..666776,666783..666788, 666795..666800) /locus_tag="B565_0609" /note="binding surface" /db_xref="CDD:29151" misc_feature order(666594..666596,666606..666608,666615..666617, 666669..666671,666705..666707,666717..666719, 666726..666728,666780..666782,666816..666818, 666828..666830,666837..666839) /locus_tag="B565_0609" /note="TPR motif; other site" /db_xref="CDD:29151" gene 667077..667152 /locus_tag="B565_t017" /db_xref="GeneID:10486527" tRNA 667077..667152 /locus_tag="B565_t017" /product="tRNA-Lys" /db_xref="GeneID:10486527" gene 667170..667245 /locus_tag="B565_t018" /db_xref="GeneID:10490002" tRNA 667170..667245 /locus_tag="B565_t018" /product="tRNA-Val" /db_xref="GeneID:10490002" gene complement(667550..668863) /locus_tag="B565_0610" /db_xref="GeneID:10490003" CDS complement(667550..668863) /locus_tag="B565_0610" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="YP_004391262.1" /db_xref="GI:330828310" /db_xref="GeneID:10490003" /translation="MSQVQWSSRLGHVLAAAGTAIGLGAIWKFPYVTATNGGGAFLLV FLLFSFTLGVAVQVGETLLGSHSQRGVLGAFRKLVGPNWRWMGYMGIACGFFIYSFYS VVGGWTVGYAALAMAGKLNLSEGSALTALFNGYVSNPWWPVLTHLIFAGLTWWFVQGG IQKGVERALRWMMPALFIMMLLLVGVGLSMPGSMAGVRQLLLPDFSMLTGQSVLDALG LAFFSLSIGLGVHTTYGAYLPNSEGVLRSGVWVVTLASLISVLAGLMIFPALASTGID PTAGPGLTFMTMPAVFSHLPLGQGLGVVFFLLLLVAALSSSISMLEHLVRFTTEEWGW SRRGACRVLTLLIMASGIPVSLSFGPWSDLTLFGKTIFELLDYLTSNLMMPLFGLVLT LLLGWRLGDAILPVGLSPALRLALLWCWRVVAPLLISGILIRGIM" misc_feature complement(667721..668860) /locus_tag="B565_0610" /note="Sodium:neurotransmitter symporter family; Region: SNF; cl11976" /db_xref="CDD:196291" gene 669296..670015 /locus_tag="B565_0611" /db_xref="GeneID:10486528" CDS 669296..670015 /locus_tag="B565_0611" /codon_start=1 /transl_table=11 /product="ABC transporter periplasmic binding protein" /protein_id="YP_004391263.1" /db_xref="GI:330828311" /db_xref="GeneID:10486528" /translation="MRWMVLPWLLISLSVSAQPGLTLLSHDLPPFTEYRDGKLDGFAI RLIDEVQEELGTRYPVRIYPLKRALALARVEPGYGLFVVQRLPERESHFKWVGPLFIN RVFIYQAPDSRHPLTSLAQLRDLPRVGVVLGNADDVRLTHEGYTNLVRYKTVGEAIER LMLGKIDALPMAELVMEATLDKMGLSRRSIVSSGVLLHQAGLYIVFSKGTDDAEITRW QHALDAVRVAQGRADGPTREE" misc_feature 669374..669997 /locus_tag="B565_0611" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature 669374..669997 /locus_tag="B565_0611" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature order(669377..669379,669560..669562,669695..669697, 669809..669811) /locus_tag="B565_0611" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(669758..669760,669770..669772,669788..669790) /locus_tag="B565_0611" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 669893..669910 /locus_tag="B565_0611" /note="hinge residues; other site" /db_xref="CDD:29040" gene complement(670019..671332) /locus_tag="B565_0612" /db_xref="GeneID:10486529" CDS complement(670019..671332) /locus_tag="B565_0612" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="YP_004391264.1" /db_xref="GI:330828312" /db_xref="GeneID:10486529" /translation="MKQSQWSSRLGYILAAAGSAVGIGAIWKFPYVTAVNGGGAFLLV FLLFSFTLGVAVLMGETLLGSMSRRGVVGAFSDLLGKQWRWVGVMGVISTLLIYCFYS VVGGWTLGYTGMAISGQLNHGDAAALTARFNDYVSGDVWPILTHLLFAAFTWMVVQGG IQKGVERTLRWMMPALFLMILMLVAFGLTLPNAMAGVRHFLMPDFSKLGMSGVLDAMG LAFFSLSIGLGIHTTYGAYLPTSEGVGRSSLWVVLLASMVAVLAGLMIFPVLASTGID PASGPGLTFMTMPAVFQLLPFGQVLEVIFFALLVFAALSSAISLLEHLQCFLCETWGW SRRMACSAITGFVMVSGVPVSLSFGPLQHATLFGKTIFELLDFVTSNLMMPLFGLMLT LLLGWKLGRKALPQGIASHWHHLLMNCWRWVAPLLIGGILIRGLV" misc_feature complement(670190..671329) /locus_tag="B565_0612" /note="Sodium:neurotransmitter symporter family; Region: SNF; cl11976" /db_xref="CDD:196291" gene complement(671544..672383) /locus_tag="B565_0613" /db_xref="GeneID:10486530" CDS complement(671544..672383) /locus_tag="B565_0613" /codon_start=1 /transl_table=11 /product="putative oxidoreductase iron/ascorbate family" /protein_id="YP_004391265.1" /db_xref="GI:330828313" /db_xref="GeneID:10486530" /translation="MKVLTVDYRSPDAAQRFTESLRTTGFGVLTNHPIPKELVQSIYD NWYRFFMSEQKQDFLFNRETQDGYFPPSVSEVAKGHSQKDIKEYFHIYPWGQMPEELK EQAMEYYRLANGLAAELLGWVEQYTPADIDAHYSCPLSSMIEESQKTLLRVLHYPPFD GTEEPGAIRAAAHEDINLLTILPAANEPGLQVKGSDGEWMDVPCDFGTLIINIGDMLQ EASRGYYPSTTHRVINPTDGSAAKSRISLPLFLHPRPDVVLSERHTAHSYLMERLREL GVI" misc_feature complement(671604..672350) /locus_tag="B565_0613" /note="Isopenicillin N synthase and related dioxygenases [General function prediction only]; Region: PcbC; COG3491" /db_xref="CDD:33294" misc_feature complement(671625..671933) /locus_tag="B565_0613" /note="2OG-Fe(II) oxygenase superfamily; Region: 2OG-FeII_Oxy; cl01206" /db_xref="CDD:194067" gene 672590..673153 /locus_tag="B565_0614" /db_xref="GeneID:10486531" CDS 672590..673153 /locus_tag="B565_0614" /codon_start=1 /transl_table=11 /product="DNA repair ATPase" /protein_id="YP_004391266.1" /db_xref="GI:330828314" /db_xref="GeneID:10486531" /translation="MSPKILLLTLPVLLAGCSALSEDECRTMSWYNLGYQDGSEGKTR QASRDYVSSCSEYGLKVDEAEWKRGYDKGLELYCIPELAYSKGKEGQAYLGVCPNDAR FLKQYQRGYEEYKLAARMREISDELERTERDIDTLERSIRNETNTEQRDYYRAKRDRA IRHYESLRREYNRLRYPDRVIQFSFGG" misc_feature 672671..672931 /locus_tag="B565_0614" /note="Protein of unknown function (DUF2799); Region: DUF2799; pfam10973" /db_xref="CDD:151420" gene complement(673205..674023) /locus_tag="B565_0615" /db_xref="GeneID:10486532" CDS complement(673205..674023) /locus_tag="B565_0615" /codon_start=1 /transl_table=11 /product="HAD superfamily hydrolase" /protein_id="YP_004391267.1" /db_xref="GI:330828315" /db_xref="GeneID:10486532" /translation="MSEYKAIALDMDGTLLTRDHKISSATRAALAQARAHGIKVLLVT GRHYMTARPFHHELALDTPLICSNGAYLYDPVQNGILSGDPLAAAPLTELLAAVEAQQ MGALFHLSEGIGYIGCEEHVTRIRHWSANQPDHLKIAIHPVEELAGWLDNPVWKLELF NQDPARLHTFMGEVVEQMPFTRDWAAPYAVELVQPGCSKGNRLAQWAASEGIAMEQVV AFGDNNNDISMFEQVGLAVAMGNAAPQIQSHAHRVTADHNEDGIALALQRWVLP" misc_feature complement(673211..674023) /locus_tag="B565_0615" /note="pyridoxal phosphate (PLP) phosphatase; Provisional; Region: PRK10530" /db_xref="CDD:182523" misc_feature complement(<673772..674008) /locus_tag="B565_0615" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature complement(order(673889..673894,673988..673996)) /locus_tag="B565_0615" /note="active site" /db_xref="CDD:119389" misc_feature complement(673979..673996) /locus_tag="B565_0615" /note="motif I; other site" /db_xref="CDD:119389" misc_feature complement(673892..673894) /locus_tag="B565_0615" /note="motif II; other site" /db_xref="CDD:119389" misc_feature complement(673220..>673432) /locus_tag="B565_0615" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" gene complement(674134..675363) /locus_tag="B565_0616" /db_xref="GeneID:10486533" CDS complement(674134..675363) /locus_tag="B565_0616" /codon_start=1 /transl_table=11 /product="putative MFS transporter" /protein_id="YP_004391268.1" /db_xref="GI:330828316" /db_xref="GeneID:10486533" /translation="MEKHEHKNPLWVLVMTVTLAVAGFSLPSPVLAPLLLDPAQGMLT PDASDWSRKVWLGVIMGLYPLFQLVGSPWLGRLSDRYGRKPLLLLSLAGVLAGYALMA LGIAWRSLPLLLLSRIVEGLCNGNIAIVQAMAADLAGKEHKARSFAWINIGMNLGWVV GPMIGGYAAVISGDYSLAAWLAVGMTLLNLLLVYWLIPYRPPVAATRQTATLSSRQLL LQPALLPYFALTLISYGAVQLYFTYFNIWLVERLAWDPAQLAQAAVLVSLPMMAGSWL GSRIARHWRGSSLGIVGHLVMATGMLLFILPVHWWGLALTFVPAGIGMSLGELATSVA ISNRSHPEQQGQAMGLYRALAVGSEILAVLLGSLVLLAGTEWPFYLATLCSLASAAGF YLLRRRADRRQQLASCT" misc_feature complement(674185..675201) /locus_tag="B565_0616" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature complement(order(674290..674292,674299..674301, 674308..674313,674320..674325,674356..674358, 674365..674370,674380..674382,674389..674394, 674401..674403,674542..674544,674554..674556, 674563..674565,674575..674577,674587..674589, 674629..674631,674638..674643,674650..674655, 674662..674664,674890..674892,674908..674913, 674920..674925,674959..674961,674968..674973, 674980..674982,674989..674994,675139..675144, 675148..675153,675163..675165,675172..675177, 675184..675186)) /locus_tag="B565_0616" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene 675470..676093 /locus_tag="B565_0617" /db_xref="GeneID:10486534" CDS 675470..676093 /locus_tag="B565_0617" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_004391269.1" /db_xref="GI:330828317" /db_xref="GeneID:10486534" /translation="MNASTDKILFLLKSHGPQSAAALGEQLQMTSMGARQHLLALEQE GWVTFSDEARGRGRPVRLWQLTEQAWQRFPDSHSDLTVQLIDNVRELFGEEGMEGLIQ QRELQMLARYQEALGSHGLSGRLAALKELRSREGYMAEIRREEDGSWLLWESHCPICA AARTCRGFCRSELALFRQLLAPATVEREQYLLEGAHRCLYRITPPAL" misc_feature 675485..676084 /locus_tag="B565_0617" /note="Predicted transcriptional regulator [Transcription]; Region: COG2345" /db_xref="CDD:32494" gene 676405..676881 /locus_tag="B565_0618" /db_xref="GeneID:10486535" CDS 676405..676881 /locus_tag="B565_0618" /codon_start=1 /transl_table=11 /product="Bkd operon transcriptional regulator" /protein_id="YP_004391270.1" /db_xref="GI:330828318" /db_xref="GeneID:10486535" /translation="MLKLDRIDRHILELMQENGRISNLELAELVGLSPSPCSRRVKAL EDAGLIDTHVTLLNARQLGLTLTAYIHISMDRHTPERFENFDRAISELPEVLECDLIT GNDADYQLKVVVRDMEHYQHFLLDKLTHIPGVTGVRSSFVLRRIKHKTALPLNHLG" misc_feature 676414..676875 /locus_tag="B565_0618" /note="leucine-responsive transcriptional regulator; Provisional; Region: PRK11169" /db_xref="CDD:183009" misc_feature 676414..676746 /locus_tag="B565_0618" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene complement(677017..677334) /locus_tag="B565_0619" /db_xref="GeneID:10486536" CDS complement(677017..677334) /locus_tag="B565_0619" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391271.1" /db_xref="GI:330828319" /db_xref="GeneID:10486536" /translation="MQTSIVGLSILWGLASFGVQGDFIESRDSVAPSWQAESRVEMEG YLIESLGEDRWLFDNGSESLLVSLPEGQWVPTGERLRVSGEPQQEQSGWLLQVEDISQ VSA" misc_feature complement(677026..>677244) /locus_tag="B565_0619" /note="Bacterial OB fold (BOF) protein; Region: BOF; cl01196" /db_xref="CDD:194065" gene complement(677480..677707) /locus_tag="B565_0620" /db_xref="GeneID:10486537" CDS complement(677480..677707) /locus_tag="B565_0620" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391272.1" /db_xref="GI:330828320" /db_xref="GeneID:10486537" /translation="MKKLLPLCALLLTACQTTQPPNSLAIDDADAWQAICKDGTRVRA VVAEGICGDHRGVAMWTNKPRAERMAEEAAK" gene 677914..678369 /locus_tag="B565_0621" /db_xref="GeneID:10486538" CDS 677914..678369 /locus_tag="B565_0621" /codon_start=1 /transl_table=11 /product="Nudix hydrolase 1" /protein_id="YP_004391273.1" /db_xref="GI:330828321" /db_xref="GeneID:10486538" /translation="MSTLYPRVGVGVILTNAQGQVLLGKRKGSHAPYWSIPGGHLELG ESFESAAIREVAEETGLEIHGPEVVAVTNNLETWRESGLHYISVTLHARADGEPQLLE PEKCEGWVWCDPRELPEPHFDASRQSITCWLAGRCYLPGDMPMVSAESV" misc_feature 677929..678300 /locus_tag="B565_0621" /note="Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly...; Region: Nudix_Hydrolase_19; cd04678" /db_xref="CDD:72913" misc_feature 678028..678096 /locus_tag="B565_0621" /note="nudix motif; other site" /db_xref="CDD:72913" gene 678428..679594 /locus_tag="B565_0622" /db_xref="GeneID:10486539" CDS 678428..679594 /locus_tag="B565_0622" /codon_start=1 /transl_table=11 /product="chromate transport protein ChrA" /protein_id="YP_004391274.1" /db_xref="GI:330828322" /db_xref="GeneID:10486539" /translation="MRGKIVGQVFIQFLWLGCISFGGPAAHIGYFQRTFVQRLGWLTQ AEFARLLALCQLLPGPASSQLGFAIGRHRAGLGGALSAFLGFTLPSFLLLLAAAVGIG QLGSNLWLDAALHGLKLLALIVVADAVLTMSRQFCATGMTQGIMVVTAAALWWQPGLL TQLLMLAGAALICARSQRGAGSVPASAELPAAASSQPHWPTLLLFGILFIGLPLLGSP IGQLVADFYRAGSLVFGGGHVVLPLLQESVGHTLNAQQFLTGYSLAQLVPGPMFTLAT YLGAQLQPEMPMIGALSATLALFAPGFLLLWAVGPCWQQWLASPRLAGAVTGINAAVV GLLLAALYQPVWQSAVLAPTDLALAAIGFYLLRVLKLPVPAIAALLVMAAILLA" misc_feature 678440..>678775 /locus_tag="B565_0622" /note="Chromate transporter; Region: Chromate_transp; pfam02417" /db_xref="CDD:190304" misc_feature 678464..679528 /locus_tag="B565_0622" /note="chromate transporter, chromate ion transporter (CHR) family; Region: 2A51; TIGR00937" /db_xref="CDD:162120" misc_feature 679103..679525 /locus_tag="B565_0622" /note="Chromate transporter; Region: Chromate_transp; pfam02417" /db_xref="CDD:190304" gene complement(679668..680054) /locus_tag="B565_0623" /db_xref="GeneID:10486540" CDS complement(679668..680054) /locus_tag="B565_0623" /codon_start=1 /transl_table=11 /product="peptide methionine sulfoxide reductase" /protein_id="YP_004391275.1" /db_xref="GI:330828323" /db_xref="GeneID:10486540" /translation="MSSNNPEQWRSKLTPEQFHVCWEKGTERPYSGALLHNRKSGDYL CVCCKSVLFHSGAKFDSGCGWPSFDKAIEGTVEYTEDNSHGMKRVEITCRQCGSHLGH VFPDGPTETGQRYCVNSLSLDFDPDA" misc_feature complement(679677..680054) /locus_tag="B565_0623" /note="SelR domain; Region: SelR; cl00369" /db_xref="CDD:185947" gene complement(680123..682279) /locus_tag="B565_0624" /db_xref="GeneID:10486541" CDS complement(680123..682279) /locus_tag="B565_0624" /codon_start=1 /transl_table=11 /product="glycogen debranching enzyme GlgX" /protein_id="YP_004391276.1" /db_xref="GI:330828324" /db_xref="GeneID:10486541" /translation="MLVMEKGVGHPLGARLDENGCHFCVWAPQSDKVEICLYDEQEQE LMRLELPGRRGQYRFGYVRGVKAGQRYGYRVYGTPQEGMLFDPQKLLIDPYARALSRP TYWDEALYQGDSAGMIAKSVVVDDSFDWQGVGKPGISPARTIIYETHVKGFTKQHPGI PKALQGTYLGISHPLVIEHMKSLGITSVQLMPVAAFMSEPRLEQLGLTNYWGYNPIAF FAPEPRYSTRADEAVTEFKTMVRELHRAGLEVILDVVYNHTAASGFDGPTLSFKGFDN AGYYAFEAGPHGPDYTRHANVTGCGNSVNLDHPNTLRLVLDALRYWVTEMQVDGFRFD LAVTLAREAGEFEPMGAFFKAVMADPVLSQVKLIAEPWDIGPFGYRLGQFPSQWQEIN DRYRDTVRAFWRGDAGKMGDFATRLVGSRDIFPKNWRSPHTSVNYLCYHDGFTLEDLV SYNQRHNQANGEDNRDGHGNNLSYNHGVEGPTLDPRVNSLRQQQKRNLIATLLLSQGT PHFLAGDEMGRSQLGNNNAYCQDNQISWVNWQWRPEDERLFAFTQQMMALRAESCVFS NLQLSDDSWNGTPSSCHQVNWYHPDGHQLTDQDWHAPMGQAFAMDIGMINCVGERWYV LFNASDYDIQFRLPPPGEGLEWIQTIDTATNDGLPFLPDDIKRQVAVGRAHSLKLLER VALASTAEDAQPPQQEILPASGEEMVATSITDTGKA" misc_feature complement(680315..682261) /locus_tag="B565_0624" /note="glycogen debranching enzyme GlgX; Region: glgX_debranch; TIGR02100" /db_xref="CDD:131155" misc_feature complement(681950..682249) /locus_tag="B565_0624" /note="E or 'early' set of sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end; Region: E_set; cl09101" /db_xref="CDD:195789" misc_feature complement(<681488..681751) /locus_tag="B565_0624" /note="Alpha amylase, catalytic domain; Region: Alpha-amylase; cl07893" /db_xref="CDD:164103" misc_feature complement(<681278..>681571) /locus_tag="B565_0624" /note="The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-...; Region: GH31; cl11402" /db_xref="CDD:196216" misc_feature complement(681278..681280) /locus_tag="B565_0624" /note="catalytic site [active]" /db_xref="CDD:133121" gene complement(682279..684456) /locus_tag="B565_0625" /db_xref="GeneID:10486542" CDS complement(682279..684456) /locus_tag="B565_0625" /codon_start=1 /transl_table=11 /product="1,4-alpha-glucan branching protein" /protein_id="YP_004391277.1" /db_xref="GI:330828325" /db_xref="GeneID:10486542" /translation="MLVERLVAARCSDPFSHLGLQANPDGPGLKLTAWLPDALEVRVK DLKSGKVVATLAPTDESGLFETVFTRRKNSFPYQLIASYQDATTEVIDPYQFQDAAWA GLAELTAQPENLYHTLGAQLRTVEHLGQQVEGVRFAVYAPSATAVSLIGDFNFWDGRR HPMQRSLCGHWVLFVPGLKVGDRYKFELKDPMGNRLPHKSDPVGFYCEQYPSFASVVY DHAQYQWQDAEWIASQHNDKREQPLSIYELHVGSWKRHPNGDSLSWRELAVELVAYVK EMEYTHIELLPVSEHPFSGSWGYQPVGMFSPTSRYGTADDFKYFVDQCHQAGIGIILD WVPAHFPSDAHGLARFDGTPLYEYEDPRRGWHPDWNSYIYDFGRDTVRQFLVASALFW LDKFHIDGLRVDAVASMLYLDYSRNAGEWVPNVDGGNHNYEAISLLKWTNEEVYGKYP HAMTIAEESTAFAGVSRPTFLGGLGFGFKWNMGWMHDTLTYMQKEPIHRRYHHNDMTF SMVYHYDENFILSLSHDEVVHGKHSMLYKMPGDEWQQAANLRAYMGFMYAHPGKKLNF MGTEIAQSNEWNHDAQLPWHLLQYPKHAGQQRLIHDLNHLYRHEPALYQADYEQTGFR WLDHNDADNSIFAWLRADKEGKQAIVVACNFTPVPRLEYRIGVPAAGHYRVVLNTDSE YYWGSNYDVGLVFAAEPTPWQGMAHSIVLDLPPLATLFIKQES" misc_feature complement(682282..684450) /locus_tag="B565_0625" /note="glycogen branching enzyme; Provisional; Region: PRK05402" /db_xref="CDD:180057" misc_feature complement(683803..684129) /locus_tag="B565_0625" /note="Glycogen branching enzyme N-terminus domain. Glycogen branching enzyme (AKA 1,4 alpha glucan branching enzyme) catalyzes the formation of alpha-1,6 branch points in either glycogen or starch by cleavage of the alpha-1,4 glucosidic linkage yielding a...; Region: Glycogen_branching_enzyme_N_term; cd02855" /db_xref="CDD:30342" misc_feature complement(<683440..683667) /locus_tag="B565_0625" /note="Alpha amylase, catalytic domain; Region: Alpha-amylase; cl07893" /db_xref="CDD:164103" misc_feature complement(682291..682575) /locus_tag="B565_0625" /note="Alpha amylase, C-terminal all-beta domain; Region: Alpha-amylase_C; cl02706" /db_xref="CDD:194419" gene complement(684539..686728) /locus_tag="B565_0626" /db_xref="GeneID:10486543" CDS complement(684539..686728) /locus_tag="B565_0626" /codon_start=1 /transl_table=11 /product="4-alpha-glucanotransferase" /protein_id="YP_004391278.1" /db_xref="GI:330828326" /db_xref="GeneID:10486543" /translation="MTTLIEQLAAAKGIASEYVDAWGHPAQVSEESKAAMLGAMGYRV DDEEALVQQLEEEHRQHWLRALDPVMVVRTGDAVTLEVRLPIEFVNDALTWQLQQEQG AVLSGQFTPIEGELVGVAEFEEMECQAYRVTLDMAPELGYHQLVLLEEGNDEPLATMR LIVAPKACYKQAPIANGRKVWGPSVQLYCLRSRHNWGIGDFSDLGQLVEKAAAWGAHF VGLNPIHALYPANPESASPYSPSSRRWLNVAYINVEAVPEFRQSDRLKAEVASPAFQQ HLADLRAKENVDYTGVLQTKLGMLRQVFNEATLSAERQAAFDAFVAAGGDSLQQQAAF DALQAHFYAKGENAWGWPVWPQELRDYHNPAVAAWMAAHPQDVNFYLYLQFLADEQLA QADARAKAAGMVMGIYRDLAVGVSEGSTEIWANQDLYCPKASVGAPPDILGPLGQNWG LPPMNPNKLFEAAYQPMVDLFRANMRSCGALRIDHVMALLRLWWVPPGASAAKGAYIY YPVNDLLGILALESHRNQCLLIGEDLGTVPEGIDVTLKENGVHSYKVFFFERSKEDGG FISPAHYTEQAMSALTTHDMPTLKGFWHCDDLALGRQLGLYPDEDVLKTLYADRHQAK QRILDSLHAHKVISDNISHDVNWVGMNTELNHGLQIHMSRGSCALFSTQLEDWLEMDK PVNVPGTSYEYPNWRRKLSADLEDIFANEALKALAGKMSQARDEASR" misc_feature complement(684542..686728) /locus_tag="B565_0626" /note="4-alpha-glucanotransferase; Provisional; Region: malQ; PRK11052" /db_xref="CDD:182928" misc_feature complement(684545..686227) /locus_tag="B565_0626" /note="4-alpha-glucanotransferase; Region: Glyco_hydro_77; cl00711" /db_xref="CDD:186157" gene 687076..688071 /locus_tag="B565_0627" /db_xref="GeneID:10486544" CDS 687076..688071 /locus_tag="B565_0627" /codon_start=1 /transl_table=11 /product="23S rRNA methyltransferase A" /protein_id="YP_004391279.1" /db_xref="GI:330828327" /db_xref="GeneID:10486544" /translation="MTIKVGINGFGRIGRFVFRLACERADIEVVGINDLIDVDYMAYM LKYDSTHGRFNGTVEVKDGNLVVNGKTVRVTAERDPANLKWGEIGVDVVAEATGLFLT DETARKHIAAGAKKVVLTGPSKDATPMFVMGVNDSTYAGQDIVSNASCTTNCLAPIAK VLNDTFGIESGLMTTVHATTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGVV IPELKGLLTGMAFRVPTPDVSVVDLTVNLKKAATYAEICEAMKAASEGAMKGVLGYTE DEVVSTDFLGERQTSVFDAKAGIQLNDKFVKVVSWYDNEMGYSSKVLDLIAHISK" misc_feature 687076..688068 /locus_tag="B565_0627" /note="glyceraldehyde-3-phosphate dehydrogenase A; Provisional; Region: gapA; PRK15425" /db_xref="CDD:185323" misc_feature 687082..687525 /locus_tag="B565_0627" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 687538..688011 /locus_tag="B565_0627" /note="Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Region: Gp_dh_C; pfam02800" /db_xref="CDD:145777" gene 688158..689024 /locus_tag="B565_0628" /db_xref="GeneID:10486545" CDS 688158..689024 /locus_tag="B565_0628" /codon_start=1 /transl_table=11 /product="Aldose 1-epimerase family protein" /protein_id="YP_004391280.1" /db_xref="GI:330828328" /db_xref="GeneID:10486545" /translation="MQSIRPLTANCKLANNAAGLPVLTINNDYAKAEISLFGAHVLSY QRHGEPASIWLSDKAVLDGSKPVRGGIPICWPWFGPAPARVGSGKPSHGFARTTLWML DGVSDHTDGTLVHLSLHDSDATRALWDHPFELELDVLVGKELSLVLTTRNTGAQPLTY SGALHTYLQISAPEAVSVTGLGEPYADKLTGQDAKQQGALTLNGPLDRVYWQPEALVR VQDGERETRVVSGNHDSVVVWTPWLEGATAMADMSDDGYRTMLCVEAAIAGDAGVTVA PDEEHSFSTVII" misc_feature 688188..689018 /locus_tag="B565_0628" /note="Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism]; Region: GalM; COG2017" /db_xref="CDD:32200" misc_feature 688221..689018 /locus_tag="B565_0628" /note="D-hexose-6-phosphate epimerase-like; Region: D-hex-6-P-epi_like; cd09020" /db_xref="CDD:185697" misc_feature order(688359..688361,688431..688433,688443..688445, 688650..688652,688656..688658,688776..688778, 688872..688874,688947..688949) /locus_tag="B565_0628" /note="active site" /db_xref="CDD:185697" misc_feature order(688359..688361,688443..688445) /locus_tag="B565_0628" /note="phosphate binding residues; other site" /db_xref="CDD:185697" misc_feature order(688650..688652,688947..688949) /locus_tag="B565_0628" /note="catalytic residues [active]" /db_xref="CDD:185697" gene complement(689095..690168) /locus_tag="B565_0629" /db_xref="GeneID:10486546" CDS complement(689095..690168) /locus_tag="B565_0629" /codon_start=1 /transl_table=11 /product="Quinolinate synthase A protein" /protein_id="YP_004391281.1" /db_xref="GI:330828329" /db_xref="GeneID:10486546" /translation="MSNALSSVPPVVAMDYPFPAKPLPLSAEQRTTLTTEIKALLKER KAVLVAHYYTDPEIQALAEATGGFVGDSLEMARFGRDHEAQTLIVAGVRFMGETSKIL SPHKRVLMPTLEAECSLDLGCPIEQFSAFCDANPDHTVVVYANTSAAVKARADWVVTS SIALEIVEHLDSLGHKIIWGPDRHLGAYIEKKTGAQMLRWQGHCIVHDEFKARALREL REQNPDAAVLVHPESPASVIELADAVGSTSQLIKAAKELPQQKLIVATDRGIFYKMQQ ACPEKEMVEAPTGGDGATCRSCAHCPWMAMNGLVAIKEALTDGAERHEIHVDEDLRVK ALIPLDRMLNFAAELKLKTQGNA" misc_feature complement(689128..690132) /locus_tag="B565_0629" /note="Quinolinate synthetase A protein; Region: NadA; cl00420" /db_xref="CDD:185987" gene 690309..692414 /locus_tag="B565_0630" /db_xref="GeneID:10486547" CDS 690309..692414 /locus_tag="B565_0630" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis transducer" /protein_id="YP_004391282.1" /db_xref="GI:330828330" /db_xref="GeneID:10486547" /translation="MKQRSLKFKLLCLTMGLFLLTGLAMTLLQSASFSSLRNMVMTQT SDALEEEVSRSLQYQAERYAIQIASLMQNSYQIPLTVTAQIEAGMAKPELRLSRPQVE SLLGSSLQQASGISSIYAQFEPDGYDGEDGNWLGGASHSVAGKGSLEVYFTKDQGGAV AQQAVDAAASEAKFDTSLNEFGIRNSEWYLCGRDTRQPCLMEPYLYEISPGNKMLMTS LTVPVLRDGKFVGLAGVDMNLPIFQQLAENLGKSLYDNKADVTLVSKMGLIVGSNRYA DKLGRPLKEVGLTLPDGQPVSSDSDFILHQPIRVEAANTQWWLMIKVPKALALGKAHA ISNELGTLLVDAQRQQIIAMGGITLLVLGLLVWFIQTITAPLSLISRHVGHLSSNEGD LTQQMEIDTHQELIDLGSQLNAFLGKLRGMVQMSKGIGQQVYQQAREMKHTADTMRNS LDEQNLELESVVSAMHQMSTTAVSVAGYAEQAAQESEAATHHINTAQQTLSNARNEIH TLVGDMHEADKAVALVAQRSTNISRILDVIRAIAEQTNLLALNAAIEAARAGDMGRGF AVVADEVRALATKTRESTDEIGQLIGSLQTEVSSSQRLMNTGIERSTTTVQGTEQAFE ALNRVVAQIQQIHDHISQVATAAEQQSAVSDTINQNLMRIGDTANVIGQEASSSHQLS EALEQAATALASQLDRLRT" misc_feature 691359..691568 /locus_tag="B565_0630" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 691635..692408 /locus_tag="B565_0630" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 691794..692408 /locus_tag="B565_0630" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(692484..692939) /locus_tag="B565_0631" /db_xref="GeneID:10486548" CDS complement(692484..692939) /locus_tag="B565_0631" /codon_start=1 /transl_table=11 /product="Nodulation efficiency family protein" /protein_id="YP_004391283.1" /db_xref="GI:330828331" /db_xref="GeneID:10486548" /translation="MTALLEGLTHWHWLGLGFILLAIEVLGSVGFLLWTGIAALEVGL LLLIWPFGWQAQLLLFAVQSLLTTWAWWRWQHQRDNSGQDAASTINERMQSYMGRELT LLDDVAQGTSRVHLDDTVWTVRCDESLPAGSKVRVVGADSHILLVEPRN" misc_feature complement(692493..692912) /locus_tag="B565_0631" /note="NfeD-like C-terminal, partner-binding; Region: NfeD; cl00686" /db_xref="CDD:120037" gene complement(692936..693862) /locus_tag="B565_0632" /db_xref="GeneID:10486549" CDS complement(692936..693862) /locus_tag="B565_0632" /codon_start=1 /transl_table=11 /product="protease YbbK" /protein_id="YP_004391284.1" /db_xref="GI:330828332" /db_xref="GeneID:10486549" /translation="MMNESLIVLGIFVFLVLATLSAGIKIVPQGYNWTVERFGRYTRT LTPGLNLLIPYVDRVGHKIIMMEQVLDIPAQEVISRDNANVTIDAISFVQVVDARKAG YEVNDLTSAIRNLTMTNMRTVLGAMELDEMLSQRDTINEKLLRTMDAATAPWGIKVTR IEIKDVRPPLALVEAMNAQMKAERQKRAEVLEAEGVRQSKILKAEGEKQSQILKAEGE RQAAFLAAEARERAAEAEAKATHMVSQAIAEGDLQAINYFVAQKYTEALARIGEGPNS KIIMMPLEAGSLIGSVAGMAELFNKDGKGSKS" misc_feature complement(692972..693805) /locus_tag="B565_0632" /note="Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones]; Region: HflC; COG0330" /db_xref="CDD:30678" misc_feature complement(693215..693784) /locus_tag="B565_0632" /note="Band_7_stomatin_like: A subgroup of the band 7 domain of flotillin (reggie) like proteins similar to stomatin and podicin (two lipid raft-associated integral membrane proteins). Individual proteins of this band 7 domain family may cluster to form...; Region: Band_7_stomatin_like; cd03403" /db_xref="CDD:48215" gene 694057..695505 /locus_tag="B565_0633" /db_xref="GeneID:10486550" CDS 694057..695505 /locus_tag="B565_0633" /codon_start=1 /transl_table=11 /product="Sirohydrochlorin ferrochelatase" /protein_id="YP_004391285.1" /db_xref="GI:330828333" /db_xref="GeneID:10486550" /translation="MDYLPMFAKLEGRPVLLVGGGEVALRKARLLLAAGARLTLVSPE LEPEFAEFTGRFTHLAERFTPAHLAGQILVVAATDNLEVNALVYQSANQLGLFVNVVD DPKRSSFIFPSIIDRSPLMVAVSSGGKAPVLVRLLRERLESLLPRHLGGLTELSGRVR DKAKRVLSSISDRRRFWERAFASNTLASLIEKEDWQGAEQWLSDGLDQAKSEVGEVVL VGAGPGDPGLLTLKALQQIQQAEVVLYDQLVSAEILDLVRRDATLVSVGKKAGAHSVP QEETNRLLVEYAKAGNRVVRLKGGDPFMFGRGGEELEVLADEGIPFSVVPGITAAAGA TAYAGIPLTHRDYAQSAVFITGHCKQNGQKEGKEPDWQQLAATSQTLVIYMGLMRSEH IQQQLVDHGRSQATPIAIIERGTTSRQRVLTGTLADLAELAKQAVSPSLIVIGEVVAL RDRLAWFGELGGEQQRANPDLDGCDLKLVQLA" misc_feature 694057..695427 /locus_tag="B565_0633" /note="siroheme synthase; Provisional; Region: cysG; PRK10637" /db_xref="CDD:182606" misc_feature 694069..694443 /locus_tag="B565_0633" /note="precorrin-2 dehydrogenase; Validated; Region: PRK06719" /db_xref="CDD:180668" misc_feature 694504..694677 /locus_tag="B565_0633" /note="Sirohaem synthase dimerisation region; Region: CysG_dimeriser; pfam10414" /db_xref="CDD:150995" misc_feature 694696..695436 /locus_tag="B565_0633" /note="Tetrapyrrole (Corrin/Porphyrin) Methylases; Region: TP_methylase; cl00304" /db_xref="CDD:197405" gene 695602..696510 /locus_tag="B565_0634" /db_xref="GeneID:10486551" CDS 695602..696510 /locus_tag="B565_0634" /codon_start=1 /transl_table=11 /product="sulfate adenylyltransferase subunit 2" /protein_id="YP_004391286.1" /db_xref="GI:330828334" /db_xref="GeneID:10486551" /translation="MDRERLTHLQQLEAESIHIIREVAAEFENPVMMYSIGKDSSVML HLARKAFYPGKIPFPLLHVDTDWKFKEMIKFRDETAKKYGLDLIVHKNPEGLAMGINP FVHGSGKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERVYSFRDKSHRWDP KNQRPELWRVYNSQVNKGESIRVFPLSNWTELDIWQYIYLEKIDIVPLYFAAYRPVVE RNGIKIMVDDERMPLTAEDEVKQELVRFRTLGCYPLTGAIESDATTLPEIIEEMLLTT SSERQGRLIDHDQAGSMEQKKRQGYF" misc_feature 695626..696507 /locus_tag="B565_0634" /note="sulfate adenylyltransferase, small subunit; Region: CysD; TIGR02039" /db_xref="CDD:131094" misc_feature 695686..696252 /locus_tag="B565_0634" /note="This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. A highly...; Region: PAPS_reductase; cd01713" /db_xref="CDD:30168" misc_feature order(695944..695946,696028..696030,696133..696135, 696145..696147) /locus_tag="B565_0634" /note="Active Sites [active]" /db_xref="CDD:30168" gene 696523..697950 /locus_tag="B565_0635" /db_xref="GeneID:10486552" CDS 696523..697950 /locus_tag="B565_0635" /codon_start=1 /transl_table=11 /product="sulfate adenylyltransferase subunit 1" /protein_id="YP_004391287.1" /db_xref="GI:330828335" /db_xref="GeneID:10486552" /translation="MNSHIQTAITEQGIEAYLHAQQHKSLLRFLTCGSVDDGKSTLIG RLLHDSQQIYEDQLKALESDSQKLGTTGEKLDLALLVDGLQAEREQGITIDVAYRYFS TAKRKFIISDTPGHEQYTRNMATGASTCDLAIILIDARKGVLDQTRRHSFIASLLGIK QFVVAVNKMDLVEFSQEVFERISADYREFAKKLSVDTIHIVPVSALDGDNVVNQSDKL AWYEGETLLSLLESAEVERELERHPVRLPVQYVNRPNLDFRGFAGTLASGILRVGDKL AVLPSGKESTVTRIVTFDGDLEYALPGQAITVTFADEIDISRGDLLVDAAKRPQVTQN VLAHIVWMGEESLQPGRVYDVKLATKKSRGQVEAIRHRIEINKLDELPASELKLNEIG LCELSLTDPVAFDPYQEIRDTGSFILIDRLTNVTVGAGMIVEGLAAKAVKGHYSEFEI ELNALVRKHFPHWQALAIGNDTSKE" misc_feature 696523..697926 /locus_tag="B565_0635" /note="sulfate adenylyltransferase subunit 1; Provisional; Region: cysN; PRK05124" /db_xref="CDD:179943" misc_feature 696604..697233 /locus_tag="B565_0635" /note="CysN_ATPS subfamily. CysN, together with protein CysD, form the ATP sulfurylase (ATPS) complex in some bacteria and lower eukaryotes. ATPS catalyzes the production of ATP sulfurylase (APS) and pyrophosphate (PPi) from ATP and sulfate. CysD, which...; Region: CysN_ATPS; cd04166" /db_xref="CDD:133366" misc_feature order(696604..696606,696805..696810,696814..696816, 696820..696822,696841..696843,696847..696849, 696895..696897,696904..696906) /locus_tag="B565_0635" /note="CysD dimerization site [polypeptide binding]; other site" /db_xref="CDD:133366" misc_feature 696619..696642 /locus_tag="B565_0635" /note="G1 box; other site" /db_xref="CDD:133366" misc_feature order(696622..696624,696628..696630,696640..696645, 696652..696654,696661..696666,696811..696816, 696868..696873,696940..696945,697063..697065, 697075..697077) /locus_tag="B565_0635" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:133366" misc_feature order(696628..696630,696634..696645,696775..696777, 697021..697026,697030..697035,697132..697140) /locus_tag="B565_0635" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133366" misc_feature 696781..696813 /locus_tag="B565_0635" /note="Switch I region; other site" /db_xref="CDD:133366" misc_feature 696799..696801 /locus_tag="B565_0635" /note="G2 box; other site" /db_xref="CDD:133366" misc_feature 696856..696867 /locus_tag="B565_0635" /note="G3 box; other site" /db_xref="CDD:133366" misc_feature 696862..696918 /locus_tag="B565_0635" /note="Switch II region; other site" /db_xref="CDD:133366" misc_feature 697021..697032 /locus_tag="B565_0635" /note="G4 box; other site" /db_xref="CDD:133366" misc_feature 697132..697140 /locus_tag="B565_0635" /note="G5 box; other site" /db_xref="CDD:133366" misc_feature 697252..697494 /locus_tag="B565_0635" /note="CysN_NodQ_II: This subfamily represents the domain II of the large subunit of ATP sulfurylase (ATPS): CysN or the N-terminal portion of NodQ, found mainly in proteobacteria and homologous to the domain II of EF-Tu. Escherichia coli ATPS consists of...; Region: CysN_NodQ_II; cd03695" /db_xref="CDD:58086" misc_feature 697510..697818 /locus_tag="B565_0635" /note="TCysN_NoDQ_II: This subfamily represents the domain II of the large subunit of ATP sulfurylase (ATPS): CysN or the N-terminal portion of NodQ, found mainly in proteobacteria and homologous to the domain II of EF-Tu. Escherichia coli ATPS consists of...; Region: CysN_NoDQ_III; cd04095" /db_xref="CDD:58077" gene 697955..699679 /locus_tag="B565_0636" /db_xref="GeneID:10486553" CDS 697955..699679 /locus_tag="B565_0636" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="YP_004391288.1" /db_xref="GI:330828336" /db_xref="GeneID:10486553" /translation="MTWQQFLVLGLLAALVALLIQGKLRPALLFSGAVLITYLSGLAD INAVVAGYTNSALLTLVLLLLVSLAVEKTRIMSWFANLVGTGSFNKVLVKVWFSTAFL SAFVNNTAVVASMLGAVKRNPNHAPSRLLLPMCFAATFGGVLTLIGTSTNLIVNSFLI KMGAPPLGMFDFFMVGAGTLLTGLVAVLLFARHLPEQDTEMSRESGYFLEAKVGAGSP LAGRSVKENGLRSLKSLYLAEIIRGEQVICPVQPEHELHEGDVLLFCGDVESVGVLQE MKGLDLYGQHRLNGQHLVEVIVSHSSRLVGQTIKDAEFRTHFDAVVLAVRRGETQLTG GLGQIELHAGDTLLLAPGPQFARNKSLGREFVVVSGLEASTRLDGKRSAAVVLGFLGV LALSVFDLVPLFKGLLLMLVALLLTRILTLDEIRRRFPLDIWLVVGGALAIADQLEKS GLAKLIADWLMGEFNGASPIIAFIGIYVFTLVLTELMSNNAAAALAFPMGYQLALSMD VSTMPFILAVLFGASSSFILPYGYQTNLMVYAAGNYKMPDYLKLALPVSLAYSLGVIV MVPLLFPF" misc_feature 698012..>698476 /locus_tag="B565_0636" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature 698576..698791 /locus_tag="B565_0636" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature 698831..>699004 /locus_tag="B565_0636" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature <699221..699670 /locus_tag="B565_0636" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene 699818..700408 /locus_tag="B565_0637" /db_xref="GeneID:10486554" CDS 699818..700408 /locus_tag="B565_0637" /codon_start=1 /transl_table=11 /product="sulfate adenylyltransferase, large subunit" /protein_id="YP_004391289.1" /db_xref="GI:330828337" /db_xref="GeneID:10486554" /translation="MSNIVWHKHAVDKQSRAELKGQKPLVIWFTGLSGAGKSTLAGAL EQALAAQGKHTYLLDGDNVRHGLCGDLGFDDAARQENIRRVGEVAKLMVDAGLIVLTA FISPFRAERALVRSLLGEGEFVEVFVDAPLAICEERDPKGLYKKARAGEITNFTGIDS AYEAPEQPEIHLLNAGKPLDTLVEELLTALRQGNYL" misc_feature 699893..700333 /locus_tag="B565_0637" /note="Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS). The end-product PAPS is a biologically 'activated' sulfate form important for the assimilation...; Region: APSK; cd02027" /db_xref="CDD:30200" misc_feature order(699914..699919,699923..699934,700007..700009, 700034..700036,700049..700051,700058..700060, 700127..700135,700229..700231,700280..700285) /locus_tag="B565_0637" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:30200" gene complement(701072..701794) /locus_tag="B565_0638" /db_xref="GeneID:10486555" CDS complement(701072..701794) /locus_tag="B565_0638" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391290.1" /db_xref="GI:330828338" /db_xref="GeneID:10486555" /translation="MAINIVECTDWNDFKNKIISDLYVEGRFKKGKYLFRGQGGEDWS LSSSFDRWYHGELKNKVATAKELLNQFKMECELEDLPENVRDNDIMMMSLGQHHHLPT RLLDWSESPYVSAFFAFSLHVRATEESSKKVAIWVLNTEDPIWNPEFGCEIVNVPSFG NERIKNQHGKFTYLKTLESSIEEYVEHSPNEGTLIKYVLPARDAVKALSDLDSMGINF ARIYPGIYGNAMSAQIRVLVKL" misc_feature complement(701387..701710) /locus_tag="B565_0638" /note="FRG domain; Region: FRG; pfam08867" /db_xref="CDD:149812" gene complement(702373..704010) /locus_tag="B565_0640" /db_xref="GeneID:10486556" CDS complement(702373..704010) /locus_tag="B565_0640" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004391291.1" /db_xref="GI:330828339" /db_xref="GeneID:10486556" /translation="MRINQPVTQRERLYPDHQSLISTTDLESRITYANDEFCDIAGFS LDELKGEHHNLVRHPDMPKQAFADLWGHIRDGKSWMGPVKNRCKNGDHYWVSAFVTPI KDASGRVVEYQSVRTAPSEEIKQRAEKVYADLRNNKLPLALKLPTFSHTLTINLCLLL SLLAMFALGYSHDMNWQLALAALPLAIAAITLNALSRRLGKLNKMARSRFDNPLMQLL YTNKVDNIAAIELSMVMNQAEFNAVLARTQQTCSKILQAAEGDLRNAESITDNLQQQQ AETNQVATAVTEMSESIREVSQSSTDSSSLLDETAVLFKSGNSSVAETVAAVAGMNSE LITSKSVISALVGHCRDIDGILDVINNIANQTNLLALNAAIEAARAGEAGRGFSVVAD EIRTLAIKTQSSTSEIQKMITELQNSSGEAEQAMEKGCQLADSCQQKATATGTILQQI NNMLQQVASGSSQIAQAVQEQSHVTAEINRNVLSIKTLADDSSVGSQHAVHGITQLVN QLSDLDRLVRQFQKGAPASQSRYEVATTRAVPVRQAR" misc_feature complement(703666..703950) /locus_tag="B565_0640" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(703663..703923) /locus_tag="B565_0640" /note="PAS fold; Region: PAS_3; pfam08447" /db_xref="CDD:117024" misc_feature complement(order(703741..703743,703756..703758, 703834..703845,703882..703884,703900..703902, 703912..703914)) /locus_tag="B565_0640" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(703714..703716,703720..703722, 703804..703809,703816..703818,703840..703842, 703852..703854)) /locus_tag="B565_0640" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(702448..703218) /locus_tag="B565_0640" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(702448..>702852) /locus_tag="B565_0640" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 703984..704163 /locus_tag="B565_0639" /db_xref="GeneID:10486558" CDS 703984..704163 /locus_tag="B565_0639" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391292.1" /db_xref="GI:330828340" /db_xref="GeneID:10486558" /translation="MGNRLIDSHGLAPELWWLNFDLHQDICKGRASWQKLMIDVLLAR FGEEKRVVVCNMQRS" gene complement(704287..705147) /locus_tag="B565_0641" /db_xref="GeneID:10486557" CDS complement(704287..705147) /locus_tag="B565_0641" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391293.1" /db_xref="GI:330828341" /db_xref="GeneID:10486557" /translation="MADLPPPKKESSILSSQEQTLRLARSRGIDGMLTRNTDSTFEQR ATFRHLADQAARQRNLEAIMVMASRHCEETAAGGEMDSDWLTRFLQLAEDISMVPMQQ LWGRIFALEVATPGRFSIRALATLKEMTQREAQLFQRICSLTCHYTGSDEQRLLLGLH KGATLLSRAKATRLGLGKYRLPYNALLQLFELGLLHRAELESGPLPADGVELEFGNQR WRLQCKQNNITLLYYRLTPVGNELAQLLQESPLEEYLQDLKTVLVQGIQIEVMQLVSP PSSPAPDPLP" misc_feature complement(704344..705081) /locus_tag="B565_0641" /note="Protein of unknown function (DUF2806); Region: DUF2806; cl12560" /db_xref="CDD:189248" gene complement(705252..705722) /locus_tag="B565_0642" /db_xref="GeneID:10486559" CDS complement(705252..705722) /locus_tag="B565_0642" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391294.1" /db_xref="GI:330828342" /db_xref="GeneID:10486559" /translation="MKWKIVALLASLLVLPALAADYKTIDWDVLIPEGEKLLPPPQVN HEDPMSVPQPVGGVNKTLDNQDVRIPGFVVPLEGDAKKITAFLLVPYFGACIHVPPPP TNQVIYVSYPKGAPVDDLWDAIWVKGKMRTVSSSHEMATASYSMEAVEVSVYEE" misc_feature complement(705258..705650) /locus_tag="B565_0642" /note="Protein of unknown function (DUF3299); Region: DUF3299; cl01387" /db_xref="CDD:154372" gene complement(705758..707005) /locus_tag="B565_0643" /db_xref="GeneID:10486560" CDS complement(705758..707005) /locus_tag="B565_0643" /codon_start=1 /transl_table=11 /product="antimicrobial peptide ABC transporter permease" /protein_id="YP_004391295.1" /db_xref="GI:330828343" /db_xref="GeneID:10486560" /translation="MLKLALQSLWARRLTAGLTLLAVAISVTLLLGVERVRTQARESF SNTVSGTDLIVGARSGQVNLLLYSVFRIGNPTNNVGWDSYQAIKQKPGVAWTIPLSLG DSHKGFRVLGTNGDYFTHLKYGQQQSLQLREGRPFETPFEAVLGAQVAEKLGYHLDQS IVIAHGAGNTSFSQHDNLPFKVVGILAPTGTPIDRTIHVPLAGIEAIHLGWDTGRHSK NVTPEQALAQDLTPKTITAFMVGLSNRILAFQLQRSVNTYPKEPLMAILPGAALQELW SLMSVAETALSVIAGFVVVAGLIGMLTTLLAGLNERRRELAILRSLGAGPAHLFLLLA LEAMALTTVGIALGVAVLYLGQGLASPWLLSHYGLQLSLGLPSTYEWQLLGVVWLAGM VIGLLPAARAYRYSLSDGMSIRV" misc_feature complement(<706403..706765) /locus_tag="B565_0643" /note="MacB-like periplasmic core domain; Region: MacB_PCD; pfam12704" /db_xref="CDD:193180" misc_feature complement(706043..>706255) /locus_tag="B565_0643" /note="Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]; Region: COG3127" /db_xref="CDD:32941" misc_feature complement(705785..706147) /locus_tag="B565_0643" /note="FtsX-like permease family; Region: FtsX; pfam02687" /db_xref="CDD:190390" gene complement(706999..707688) /locus_tag="B565_0644" /db_xref="GeneID:10486561" CDS complement(706999..707688) /locus_tag="B565_0644" /codon_start=1 /transl_table=11 /product="antimicrobial peptide ABC transporter ATP binding protein" /protein_id="YP_004391296.1" /db_xref="GI:330828344" /db_xref="GeneID:10486561" /translation="MKKAVVEIRDLAFAWPGGDAVLDLPALTIREGERVFIKGPSGSG KSTLLGLLAGIQTANHGTLEVLGQPLARLSGRARDHFRAANLGYIFQQFNLLPFLSVQ DNVTAALTFSPAKRARLQGSPEQEARRLLAELQLPDEALHRPVHALSIGQQQRVAAAR ALIGSPPLVIADEPTSALDTDNRAAFIKLLFEECDKQGSTLIFVSHDPYLEPLFPRVE NLQQLNRRATC" misc_feature complement(707026..707676) /locus_tag="B565_0644" /note="ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]; Region: SalX; COG1136" /db_xref="CDD:31331" misc_feature complement(707023..707673) /locus_tag="B565_0644" /note="This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together...; Region: ABC_MJ0796_Lo1CDE_FtsE; cd03255" /db_xref="CDD:73014" misc_feature complement(707551..707574) /locus_tag="B565_0644" /note="Walker A/P-loop; other site" /db_xref="CDD:73014" misc_feature complement(order(707071..707073,707170..707175, 707416..707418,707548..707556,707560..707565)) /locus_tag="B565_0644" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73014" misc_feature complement(707416..707427) /locus_tag="B565_0644" /note="Q-loop/lid; other site" /db_xref="CDD:73014" misc_feature complement(707218..707247) /locus_tag="B565_0644" /note="ABC transporter signature motif; other site" /db_xref="CDD:73014" misc_feature complement(707170..707187) /locus_tag="B565_0644" /note="Walker B; other site" /db_xref="CDD:73014" misc_feature complement(707152..707163) /locus_tag="B565_0644" /note="D-loop; other site" /db_xref="CDD:73014" misc_feature complement(707065..707085) /locus_tag="B565_0644" /note="H-loop/switch region; other site" /db_xref="CDD:73014" gene complement(707693..708289) /locus_tag="B565_0645" /db_xref="GeneID:10486562" CDS complement(707693..708289) /locus_tag="B565_0645" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391297.1" /db_xref="GI:330828345" /db_xref="GeneID:10486562" /translation="MKAVTLLLAAAAFGAHANHDEHESHSHGAHEHGHGHLNLVVDGD QLMIELQAPAADLVGFEHAAKSDEEKAQYAKAVARLQQPDALFRFDPAAGCKLTQQEL QAAKEEHDHDHDHDHDHDHDKAASDKHEDHHDHDEAGHADMGAMYTYTCATPAKLTGL EATLFSVYPSLEKLSVQGILPTGQTAGELTPSANKLSW" misc_feature complement(707702..708181) /locus_tag="B565_0645" /note="Protein of unknown function (DUF2796); Region: DUF2796; pfam10986" /db_xref="CDD:151433" gene complement(708322..708621) /locus_tag="B565_0646" /db_xref="GeneID:10486563" CDS complement(708322..708621) /locus_tag="B565_0646" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391298.1" /db_xref="GI:330828346" /db_xref="GeneID:10486563" /translation="MGRIKLKIWILLLGWLWLQPALARHQFESVLPGHDDHHCLVCAL HLDGKQVITATPYCFPGSTSVLPAVATMQRSADTATLHSYAIRAPPASVFIYPFV" gene complement(708666..709208) /locus_tag="B565_0647" /db_xref="GeneID:10486564" CDS complement(708666..709208) /locus_tag="B565_0647" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391299.1" /db_xref="GI:330828347" /db_xref="GeneID:10486564" /translation="MKHLVLTLALLPSLVFAHNFKDGNTVPLVNVSDKGELVLNGKDI GYQPWQSTSLTGKVFLIQHIAGRSSAKELNAPMIEAIKAAKLPQDKYQTVTVINSNDA IWGTSGFVKSSAEDSKKEFPWSAMVLDAKGMARNAWDLTPESSAIILLDKEGKVLFAK DGQLDANNIATVMGLIKSHL" misc_feature complement(708672..709151) /locus_tag="B565_0647" /note="Bacterial protein of unknown function (YtfJ_HI0045); Region: YtfJ_HI0045; cl01158" /db_xref="CDD:194056" gene complement(709429..710319) /locus_tag="B565_0648" /db_xref="GeneID:10486565" CDS complement(709429..710319) /locus_tag="B565_0648" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391300.1" /db_xref="GI:330828348" /db_xref="GeneID:10486565" /translation="MKLTPALLLSLTLSTTLGATSNASEINMSWQWQSTDGQRKHFQL TTDDQVMAASRHEMSLLKASLTNPLETLYAYISPRLYNSINLINQSSPETATKFRNLE QAFTLRDDSMESLLFWQAYQQYQEDAFYQMRVIPCVHPANRKLPCVRPDYSQLFYHFK GHLKPLAQQFAAKDLATSVSLLQEWLNAIPTQPEQLDHFAPPLQALQDNKADSDEKAL LMASLLAELAPQYVLSIIYPDISIGSVSPAWLAITADSGVPGDVVVINNQRHVLLTGS SLLAQQMTMAKIPLISESLY" gene 710459..710806 /locus_tag="B565_0649" /db_xref="GeneID:10486566" CDS 710459..710806 /locus_tag="B565_0649" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391301.1" /db_xref="GI:330828349" /db_xref="GeneID:10486566" /translation="MKPWSIVLFGLLSLPAMAGQVIVNKGMSVADTFALRDQLAREHE WQEWLRYQQAIKWLEVLPVNCELMSQPGGGYRCGGDYYRPYQKDGREIYIQGNPAEDA AGQLPQIPTKKAP" gene complement(710835..711365) /locus_tag="B565_0650" /db_xref="GeneID:10486567" CDS complement(710835..711365) /locus_tag="B565_0650" /codon_start=1 /transl_table=11 /product="Inorganic pyrophosphatase" /protein_id="YP_004391302.1" /db_xref="GI:330828350" /db_xref="GeneID:10486567" /translation="MSLNLVPAGKSLPDDIYVIIEIPQNADPIKYEVDKDSGAIFVDR FMSTPMFYPCNYGYVNATLSLDGDPVDVLVPTPYPLLAGSVIRCRPVGVLKMTDESGE DAKIVAVPHSKLTKQYDHIQDVNDLPELLKAQIQHFFERYKELEAGKWVKVEGWGDKA AAEAEIKTSAERYAAK" misc_feature complement(710853..711326) /locus_tag="B565_0650" /note="Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers; Region: pyrophosphatase; cd00412" /db_xref="CDD:29533" misc_feature complement(order(711129..711134,711291..711296)) /locus_tag="B565_0650" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29533" misc_feature complement(order(710937..710942,711198..711200, 711234..711236,711276..711278)) /locus_tag="B565_0650" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:29533" misc_feature complement(order(711057..711059,711072..711074, 711153..711155,711168..711170,711270..711272)) /locus_tag="B565_0650" /note="metal binding sites [ion binding]; metal-binding site" /db_xref="CDD:29533" gene complement(711582..713162) /locus_tag="B565_0651" /db_xref="GeneID:10486568" CDS complement(711582..713162) /locus_tag="B565_0651" /codon_start=1 /transl_table=11 /product="putative sensory transduction protein" /protein_id="YP_004391303.1" /db_xref="GI:330828351" /db_xref="GeneID:10486568" /translation="MSSAQDKDDILLDDDIIELDDEEVVVPKALNPWQVLIVDDEPDI HHATRLALSNIHYKSRPLELLNAYSGAEAGRMLEANPRIALILLDVVMETEDAGLRLV HRIRNEMHNSLVRIVLRTGQPGQAPEQRVILDYDINDYKTKTELTVQKLYTTVIASLR SYETLSAIDKSRQGLGKILEGAGDLYHLHSLKEFASGVLKQISAILDVGTEGAICAER RPGEQGLEILAATGDYETLLDDGKITDFPTLNDSVMKALAARCNRFEHPQDSLYIAAQ NGREFVLSFTPTQPLDPLECDLLDVFCQRISAAYDNLYLYNQLLRAQEATVVALAALA EFRDSDTGEHVLRVQKLSDAIVAELKQMTAYPEQLTPEFVEMIGMASILHDVGKVGTP DHILHKPGRFDPEERAIMEQHAGIGANILHKAGEMVEGTSYLSLGAEIARGHHEHFDG KGYPQQLAGQQIPLSARIVAVVDVFDALLSKRPYKEPWTLAQTMEYIQSRSGTQFDPH VVTALSRLVNESRLPYSL" misc_feature complement(712698..713078) /locus_tag="B565_0651" /note="FOG: CheY-like receiver [Signal transduction mechanisms]; Region: CheY; COG0784" /db_xref="CDD:31127" misc_feature complement(712734..713057) /locus_tag="B565_0651" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(712734..712736,712743..712745, 712803..712805,712869..712871,712896..712898, 713043..713048)) /locus_tag="B565_0651" /note="active site" /db_xref="CDD:29071" misc_feature complement(712896..712898) /locus_tag="B565_0651" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(712869..712871,712875..712880, 712884..712889)) /locus_tag="B565_0651" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(711591..712811) /locus_tag="B565_0651" /note="Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms]; Region: COG3437" /db_xref="CDD:33243" misc_feature complement(712206..712700) /locus_tag="B565_0651" /note="Domain of unknown function (DUF3369); Region: DUF3369; pfam11849" /db_xref="CDD:152285" misc_feature complement(711672..712145) /locus_tag="B565_0651" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature complement(order(711744..711746,712008..712013, 712131..712133)) /locus_tag="B565_0651" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature complement(712008..712010) /locus_tag="B565_0651" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene complement(713272..714153) /locus_tag="B565_0652" /db_xref="GeneID:10486569" CDS complement(713272..714153) /locus_tag="B565_0652" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004391304.1" /db_xref="GI:330828352" /db_xref="GeneID:10486569" /translation="MKLYQIELFVESANSGSIANTARRLGKSRSAVSTAIAALEVELG VELFERGANQSRLTEIGELVLDDCTRLLQAANSLQQKCKHYASGAEVALRVARDDAIP EPVWREMLASLHNQFPGTSISLVLASPPELPALVEEGFVDAAFGLITEDQERSGLNID VLNPIRTLMVVAPSHPLAGLKRVKQQDLTDHTQVTLSYVDEFSVKSLLPVGGQHIGLS SFELMRNAVLDGLGWAVLPSPLIQSQLRQGSLLTLKHKFSLQWRDYGVYLAENAYHGK VLAWLKKSIQGYLEPFE" misc_feature complement(713284..714153) /locus_tag="B565_0652" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature complement(713968..714147) /locus_tag="B565_0652" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(713311..713832) /locus_tag="B565_0652" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cd05466" /db_xref="CDD:176102" misc_feature complement(order(713467..713472,713476..713481, 713497..713502,713776..713796,713800..713802, 713812..713814,713821..713826,713830..713832)) /locus_tag="B565_0652" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene 714312..714698 /locus_tag="B565_0653" /db_xref="GeneID:10486570" CDS 714312..714698 /locus_tag="B565_0653" /codon_start=1 /transl_table=11 /product="multidrug resistance protein, SMR family" /protein_id="YP_004391305.1" /db_xref="GI:330828353" /db_xref="GeneID:10486570" /translation="MLLSRMFLARLFLTGAIVTEVAGTSSMAMIPEQGAGWMNYIPMW LLIGFSYWLLAKAAKTISIGIAFALWEGLGITLITIVSVMFLGYDVTVQELIGLALAI VGIVMVTMGETHDEPSDKSVDAEATA" misc_feature 714342..714689 /locus_tag="B565_0653" /note="Small Multidrug Resistance protein; Region: Multi_Drug_Res; cl00910" /db_xref="CDD:186252" gene 714695..715015 /locus_tag="B565_0654" /db_xref="GeneID:10486571" CDS 714695..715015 /locus_tag="B565_0654" /codon_start=1 /transl_table=11 /product="putative multidrug transmembrane resistance signal peptide protein" /protein_id="YP_004391306.1" /db_xref="GI:330828354" /db_xref="GeneID:10486571" /translation="MSPFVIVLGAALIDIGANMAINRSKGFRYKGWGFLGIMLVLGAF TLLSEAVSGGQIDLAVAYATWGAIGIVGTALGGLLFFGERLKPIGWAGMMVMALAVVM LTTA" misc_feature 714722..714970 /locus_tag="B565_0654" /note="Small Multidrug Resistance protein; Region: Multi_Drug_Res; cl00910" /db_xref="CDD:186252" gene complement(715094..715495) /locus_tag="B565_0655" /db_xref="GeneID:10486572" CDS complement(715094..715495) /locus_tag="B565_0655" /codon_start=1 /transl_table=11 /product="Glyoxylase I family protein" /protein_id="YP_004391307.1" /db_xref="GI:330828355" /db_xref="GeneID:10486572" /translation="MTFPLFDAIHHVAIIASDYPRSRHFYHEVLGLPIIAETLREARQ SWKLDLALPDGSQLELFSFPSPPERPSRPEACGLRHLAFRVSDLDRVIAHLLAHRIEV EPVRVDELTGKRFTFFADPDGLPLELYEAPR" misc_feature complement(715106..715480) /locus_tag="B565_0655" /note="This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases; Region: Glo_EDI_BRP_like_1; cd08352" /db_xref="CDD:176700" misc_feature complement(order(715115..715117,715256..715258, 715463..715465)) /locus_tag="B565_0655" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:176700" gene complement(715554..717872) /locus_tag="B565_0656" /db_xref="GeneID:10486573" CDS complement(715554..717872) /locus_tag="B565_0656" /codon_start=1 /transl_table=11 /product="Penicillin-binding protein 1B" /protein_id="YP_004391308.1" /db_xref="GI:330828356" /db_xref="GeneID:10486573" /translation="MATQRRKRAPKKAAPKRTIWRKLFWLGFKLSLVVAAFMVVFGIY LDTKVRERFDGEKWQLPVMVYSRPLELYPSQRLSRDQMLRELNMLSYKQVRQPHTPGE YTINGNRIELIRRPFEFYDGADGARGLRLTFNGPRLEGIQSLENQRQLGYAQMDPVLL DRLNTEDREDRLLVRIAEVPDSLLVTLLTTEDRDFYQHGGVSPVAIMRAMFANLIAGR TVQGGSTLTQQLAKNFFLTRERSLWRKLQEAYMAVLIDYRYSKDEILESYLNEVYLGQ NFSQGVYGFGLASYFYFGIPVNELDIDQVALLVGLVKGPSYYDPWRFPERAKTRRDLV LKLLMDHGSLTQAEYELASRQPLGIIARGQMSYGRTPAFMGLLKREIQSRFGADLLKQ SGLKIFTSLDPIAQHAAERAVESGLADIEKLRGKKKLEAAMVVSDWHKGEVVALVGGR DPRYAGFNRALDARRQIGSLVKPAVYLTGLSNGLTLATPLKDQPIRIRGQDGQVWTPQ NYDRKFRQSVPLMDALASSLNVPTVNLGLQVGLEKVVDTLHKLGVQQEIQPYPSLVLG AVALSPLEVNQMYLPIANQGLTQPLSAIRAVVNGDGSLLYQHDQTAKRVTDQQASWLT LFAMTKTVSQGTARALSAKFPGATMAAKTGTTNELRDSWFAGMDNNELVSIWVGRDDN TPAGLTGASGALQLFSGYMSQRGVNSLGLKMPEGVTWANFSRASGTRVTSDCPGSLQV PAKASTMGSPAGCASSVTPRSALDDWFGGFFN" misc_feature complement(715650..717800) /locus_tag="B565_0656" /note="penicillin-binding protein 1B; Region: PBP_1b; TIGR02071" /db_xref="CDD:162683" misc_feature complement(716859..717392) /locus_tag="B565_0656" /note="Transglycosylase; Region: Transgly; cl07896" /db_xref="CDD:195645" misc_feature complement(715791..716582) /locus_tag="B565_0656" /note="Penicillin binding protein transpeptidase domain; Region: Transpeptidase; cl01039" /db_xref="CDD:154162" gene complement(717946..720393) /locus_tag="B565_0657" /db_xref="GeneID:10486574" CDS complement(717946..720393) /locus_tag="B565_0657" /codon_start=1 /transl_table=11 /product="ATP-dependent helicase HrpB" /protein_id="YP_004391309.1" /db_xref="GI:330828357" /db_xref="GeneID:10486574" /translation="MSQLPIVSVLPELFAALDSHTSVILQAPPGAGKSTLLPLELVRQ NRLPGRIIMLEPRRLAARNIATFLARQLGEKVGERIGLRVRGESRTSSATRLEIVTEG VLTRMLQQDPELTGVSLVIFDEFHERSLHADTALAFAIESQQGLRDDLKLLVMSATLD GMALETLLPDAPVVRSEGRGFPIDYHYRPANRQQWLEPQVGAVVLEALAEQDGSLLVF LPGQGEIERLAQWLADKLPDDVTLAPLYGRLDMAAQQAAIEPAPAGRRKLVLTTNVAE TSLTIEGISVVIDSGLERRASFDLKSGVTRLETRQIAKSSATQRAGRAGRLGPGICYR LWSSEVQERLAEQSPPDILTQELTGLLLDAAQWGAKVEDLPLLDMPPAAAVASAQRLL VALGAMKPEGEQQLTPAGRAMAAFGTHPRLARMLLRARELEAEGLTGIVADAAYLVAL QEEDLRGSERLSVLFHRRQNALRQSAARWFERLGARPASAQGQWLGLLCALAWPDRIG KLRSGSRYQLSGGVSCDLVEGHPCQGQAALIAIEMGQNDRGSRIFIAEPIELDELARL LPELVSERQWFDWDEREERVRAERQQVIGELVLSQRPLTELSDEQKGRCLLQGIRRKG LHVLPWDESSEGLLARLRCARDWLPDEEWPAMDDESLLATLEQWLLPAVSGMTRLEQL KKLNLGDILRQSLPWPLPKRLDEALPSHFAAPTGSRVRIRYQPGQAPVIPVRIQEMFG QGSTPCVADGRVPLVVELLSPAQRPLQITADLAAFWAGSYEQVKKEMKGRYPRHYWPD NPLEAMPTKVTKKKMGI" misc_feature complement(717961..720393) /locus_tag="B565_0657" /note="ATP-dependent RNA helicase HrpB; Provisional; Region: PRK11664" /db_xref="CDD:183267" misc_feature complement(719917..720330) /locus_tag="B565_0657" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature complement(720292..720306) /locus_tag="B565_0657" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature complement(720016..720027) /locus_tag="B565_0657" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature complement(719389..719784) /locus_tag="B565_0657" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature complement(order(719572..719580,719653..719658, 719725..719736)) /locus_tag="B565_0657" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(order(719416..719418,719425..719427, 719437..719439,719554..719556)) /locus_tag="B565_0657" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(717994..718392) /locus_tag="B565_0657" /note="ATP-dependent helicase C-terminal; Region: HrpB_C; pfam08482" /db_xref="CDD:149509" gene 720572..721114 /locus_tag="B565_0658" /db_xref="GeneID:10486575" CDS 720572..721114 /locus_tag="B565_0658" /codon_start=1 /transl_table=11 /product="2'-5' RNA ligase" /protein_id="YP_004391310.1" /db_xref="GI:330828358" /db_xref="GeneID:10486575" /translation="MAKLFFALPVKELAPELIAWRDKLPWPGQPVPQANLHLTLAFLG EADELTTRRLIAAVERQHCPPFSIRLDETGWFSRAKAAWIGPKEWPNELTVLAKALRR HGEKQRLGNGEQGYRPHVTLSRKAGEAPAILPAPNFLLQADEFCLYQSISTPDGVRYK PLACWPLRARVKEDARRANP" misc_feature 720581..721072 /locus_tag="B565_0658" /note="2'-5' RNA ligase; Region: 2_5_ligase; TIGR02258" /db_xref="CDD:162789" misc_feature 720596..720802 /locus_tag="B565_0658" /note="2',5' RNA ligase family; Region: 2_5_RNA_ligase; pfam02834" /db_xref="CDD:190445" misc_feature 720686..>720970 /locus_tag="B565_0658" /note="RNA 2'-phosphotransferase, Tpt1 / KptA family; Region: PTS_2-RNA; cl00804" /db_xref="CDD:193941" gene 721111..721854 /locus_tag="B565_0659" /db_xref="GeneID:10486576" CDS 721111..721854 /locus_tag="B565_0659" /codon_start=1 /transl_table=11 /product="sugar fermentation stimulation protein" /protein_id="YP_004391311.1" /db_xref="GI:330828359" /db_xref="GeneID:10486576" /translation="MIFDPPLQSGQLVARYKRFLTDVQLDNGEVITIHCANTGAMTGC ADPGTRVWYSTSDNPKRKLPNSWEIAESPAGHFICVNTARANQIARELIEQEAIAPLA GYSRLRTEVKYGEENSRIDLLLEDDEKGNCYIEVKSVTLLDEREQPGMGYFPDAVTAR GAKHLRELMAMKAAGHRAVLLFMVLHSGISRMRPATHIDPHYSLLIEQAIAAGVEILC YRPHVGVQGMVAQGFIPFESGHLLPEGSA" misc_feature 721111..721821 /locus_tag="B565_0659" /note="Sugar fermentation stimulation protein; Region: SfsA; cl00647" /db_xref="CDD:186125" gene 722061..722423 /locus_tag="B565_0660" /db_xref="GeneID:10486577" CDS 722061..722423 /locus_tag="B565_0660" /codon_start=1 /transl_table=11 /product="RNA polymerase factor controlling rRNA transcription with ppGpp as a modulator; DnaK suppressor protein" /protein_id="YP_004391312.1" /db_xref="GI:330828360" /db_xref="GeneID:10486577" /translation="MNDQQKAHFRKILGAWRNQLMQEVDRTVDHMKDEAANFPDPVDR AAQEEEFALELRTRDRERKLIKKIEKTLQLLEDDDFGYCEHCGIEIGIRRLEARPTAD LCVDCKTLAEIKEKQMAG" misc_feature <722061..722420 /locus_tag="B565_0660" /note="Prokaryotic dksA/traR C4-type zinc finger; Region: zf-dskA_traR; cl00755" /db_xref="CDD:193930" gene 722541..723443 /locus_tag="B565_0661" /db_xref="GeneID:10486578" CDS 722541..723443 /locus_tag="B565_0661" /codon_start=1 /transl_table=11 /product="glutamyl-Q tRNA(Asp) synthetase" /protein_id="YP_004391313.1" /db_xref="GI:330828361" /db_xref="GeneID:10486578" /translation="MNPLSSPLARPYVGRFAPSPSGPLHFGSLIAALGSFLQARAQQG RWLVRIEDIDPPREMAGAADLILKTLEAYGLEWDGEVMFQSARHGRYDEIIDQLYRAG DLYWCRCTRREIMAAGGLYSGHCRTLGLAAEGCAARLRQHHPVYHFDDRLQGHIAVPA ALAEEDFIIRRRDGLYAYNLAVVVDDMDSGITEIVRGADLLEPTVRQIALYQTLGAPV PDWVHLPLAVLADGNKLSKQNHAPALALDEVRPALWQALHFLGQCPPPELMASRIDEI IRWGIANWLLERVPASEKIPLADC" misc_feature 722583..723416 /locus_tag="B565_0661" /note="nucleotidyl transferase superfamily; Region: nt_trans; cl00015" /db_xref="CDD:193613" misc_feature order(722613..722624,723246..723257) /locus_tag="B565_0661" /note="active site" /db_xref="CDD:173912" misc_feature order(722613..722615,722622..722624,723249..723251) /locus_tag="B565_0661" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:173912" misc_feature 722613..722624 /locus_tag="B565_0661" /note="HIGH motif; other site" /db_xref="CDD:173912" misc_feature 723246..723257 /locus_tag="B565_0661" /note="KMSKS motif; other site" /db_xref="CDD:173912" gene 723701..725167 /locus_tag="B565_0662" /db_xref="GeneID:10486579" CDS 723701..725167 /locus_tag="B565_0662" /codon_start=1 /transl_table=11 /product="poly(A) polymerase" /protein_id="YP_004391314.1" /db_xref="GI:330828362" /db_xref="GeneID:10486579" /translation="MKRCTIFSQIANFCRKVLGKEDGEQSVESPIPARVAGQRRTLSR DQHPISRKEISENALKVLYRLNKGGYEAYLVGGGVRDLLLGKTPKDFDIATDATPEQI KALFSNCRLIGRRFRLAHIVFGRDVIEVATFRGHHHQVNTSKHVSAQSDEGMLLRDNV YGTIEEDAERRDFTVNALYYSAKDFTLHDFEGGLEDLAERKLELIGDPETRYREDPVR MLRAVRFAAKLDMTISPRTAAPIKELAPLLQDIPAARLFEETLKLFLAGDGLATYKLL REYGLFQQLFPQVAALFTPHGNSPYEQFIEQALIDTDTRVREDKRVTPAFLYATLLWG CVEARGRVLENESGLPWYDAFMLAINEVLDNQVRIIAVPRRFTTDVRDIWALQQRLTR RQGKHPERAMEHPKFRAAFDFLLLRNRVERGLGELASWWERYVASNPDVRPQLQREAT RRPASGERGEARSHDGEKRSSNSRNRRRPRRRKPKVAE" misc_feature 723707..725083 /locus_tag="B565_0662" /note="poly(A) polymerase I; Provisional; Region: pcnB; PRK11623" /db_xref="CDD:183239" misc_feature 723863..724291 /locus_tag="B565_0662" /note="Nucleotidyltransferase (NT) domain of ClassII CCA-adding enzymes; Region: NT_ClassII-CCAase; cd05398" /db_xref="CDD:143388" misc_feature order(723926..723931,723938..723943,723968..723970, 723974..723976,724046..724048,724085..724087, 724100..724102,724208..724219,724226..724228) /locus_tag="B565_0662" /note="active site" /db_xref="CDD:143388" misc_feature order(723926..723931,723938..723940,723968..723970, 723974..723976,724208..724216,724226..724228) /locus_tag="B565_0662" /note="NTP binding site [chemical binding]; other site" /db_xref="CDD:143388" misc_feature order(723968..723970,723974..723976,724085..724087) /locus_tag="B565_0662" /note="metal binding triad [ion binding]; metal-binding site" /db_xref="CDD:143388" misc_feature 724388..724579 /locus_tag="B565_0662" /note="Probable RNA and SrmB- binding site of polymerase A; Region: PolyA_pol_RNAbd; pfam12627" /db_xref="CDD:193105" misc_feature 724733..725074 /locus_tag="B565_0662" /note="Polymerase A arginine-rich C-terminus; Region: PolyA_pol_arg_C; pfam12626" /db_xref="CDD:193104" gene 725179..725688 /locus_tag="B565_0663" /db_xref="GeneID:10486580" CDS 725179..725688 /locus_tag="B565_0663" /codon_start=1 /transl_table=11 /product="2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase" /protein_id="YP_004391315.1" /db_xref="GI:330828363" /db_xref="GeneID:10486580" /translation="MTEVFIAIGSNLSDPLGQARRAVAALARLPESVLVEASSFYSSR PMGPADQPDYVNAVARLNTRLAPLALLDQLQKIELEQGRVRKDERWGPRTLDLDLLLY GDQVINHERLIVPHYGMKEREFVLLPLAEIAPALVLPCGTPLARLVARCPHNDLAIIA PRADVQEPL" misc_feature 725188..725574 /locus_tag="B565_0663" /note="7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after...; Region: HPPK; cd00483" /db_xref="CDD:29601" misc_feature order(725203..725205,725305..725310,725314..725316, 725338..725340,725344..725346,725389..725391, 725401..725403,725410..725412,725425..725427, 725431..725433,725446..725448,725455..725457, 725464..725466,725470..725475,725515..725517, 725524..725529,725542..725544,725548..725550) /locus_tag="B565_0663" /note="catalytic center binding site [active]" /db_xref="CDD:29601" misc_feature order(725389..725391,725401..725403,725410..725412, 725425..725427,725431..725433,725455..725457, 725470..725475,725515..725517,725524..725529, 725542..725544) /locus_tag="B565_0663" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29601" gene 725685..726479 /locus_tag="B565_0664" /db_xref="GeneID:10486581" CDS 725685..726479 /locus_tag="B565_0664" /codon_start=1 /transl_table=11 /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" /protein_id="YP_004391316.1" /db_xref="GI:330828364" /db_xref="GeneID:10486581" /translation="MSKITTASLLKMKQEGQKFTAITAYDATFAKLFDDEGAHVLLIG DSLGMVLQGGQDTLAVNMDEMVYHTRCVARGASKALVVADMPFMSYATPEQTYQNAAR LMAAGARMVKMEGGDWLCDSIRHLTRNGVPVCGHLGLTPQSVHVFGGFKVQGRDEFQA QEIYRQALELQAAGIQLLVLECVPTALAERITKALRIPVIGIGAGPATDGQILVMHDA FGVTSGYVPKFTKNFLAETGDVRAAIRLYVQQVSEGSFPGPEHCFN" misc_feature 725700..726455 /locus_tag="B565_0664" /note="Ketopantoate hydroxymethyltransferase (KPHMT) is the first enzyme in the pantothenate biosynthesis pathway. Ketopantoate hydroxymethyltransferase (KPHMT) catalyzes the first committed step in the biosynthesis of pantothenate (vitamin B5), which is a...; Region: KPHMT-like; cd06557" /db_xref="CDD:119342" misc_feature order(725700..725705,725760..725771,725778..725780, 725823..725825,725829..725846,725856..725861, 725874..725876,725883..725888,725895..725897, 725904..725906,725943..725948,725973..725975, 725985..725987,725994..725999,726009..726011, 726063..726080,726108..726113,726117..726128, 726210..726212,726330..726332,726339..726344, 726384..726386,726393..726407) /locus_tag="B565_0664" /note="oligomerization interface [polypeptide binding]; other site" /db_xref="CDD:119342" misc_feature order(725751..725753,725808..725810,725814..725822, 725934..725936,726018..726020,726090..726092, 726105..726107,726225..726227,726318..726320, 726324..726326) /locus_tag="B565_0664" /note="active site" /db_xref="CDD:119342" misc_feature order(725817..725819,725934..725936,726018..726020) /locus_tag="B565_0664" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:119342" gene 726636..727538 /locus_tag="B565_0665" /db_xref="GeneID:10486582" CDS 726636..727538 /locus_tag="B565_0665" /codon_start=1 /transl_table=11 /product="Pantothenate synthetase" /protein_id="YP_004391317.1" /db_xref="GI:330828365" /db_xref="GeneID:10486582" /translation="MQPVSLFDLSEGELLMLVVNNPVVLREQISQWRREGRAIAFVPT MGNLHQGHLTLVKEAHSHAEKVVVSIFVNPMQFDKAEDLANYPRTLEQDCAALEAAGV DMVFTPTPEIMYPQGLASQTFVEVPGLSNLLEGALRPGHFRGVSTVVTKLFNLVQPDV ACFGQKDYQQLALIRKMVADMAMPIEIVGVPTVRAEDGLALSSRNGYLTAAERAIAPE LARTMNWIAEQIEAGDHHLPSLVAQASQRLDNAGFRTDAIDIVDAATLESATDESAQL VILMAAYLGKARLIDNQVVTLQQA" misc_feature 726711..727520 /locus_tag="B565_0665" /note="pantoate--beta-alanine ligase; Region: panC; TIGR00018" /db_xref="CDD:161666" misc_feature 726711..727511 /locus_tag="B565_0665" /note="Pantoate-beta-alanine ligase; Region: PanC; cd00560" /db_xref="CDD:185673" misc_feature order(726762..726773,726780..726782,726786..726791, 726798..726800,726852..726854,726861..726863, 726891..726893,727068..727070,727077..727082, 727122..727127,727131..727136,727143..727145, 727206..727214,727236..727247) /locus_tag="B565_0665" /note="active site" /db_xref="CDD:185673" misc_feature order(726762..726770,726780..726782,726789..726791, 726798..726800,726861..726863,727077..727082, 727122..727127,727131..727136,727143..727145, 727209..727214,727233..727238) /locus_tag="B565_0665" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:185673" misc_feature order(726762..726764,726768..726770,726852..726854, 726861..726863,727077..727082,727089..727091, 727143..727145) /locus_tag="B565_0665" /note="pantoate-binding site; other site" /db_xref="CDD:185673" misc_feature 726780..726791 /locus_tag="B565_0665" /note="HXXH motif; other site" /db_xref="CDD:185673" gene 727563..727913 /locus_tag="B565_0666" /db_xref="GeneID:10486583" CDS 727563..727913 /locus_tag="B565_0666" /codon_start=1 /transl_table=11 /product="antibiotic biosynthesis monooxygenase domain-containing protein" /protein_id="YP_004391318.1" /db_xref="GI:330828366" /db_xref="GeneID:10486583" /translation="MSKKVYCIAQFLPKPGQEQALFQVLQALEPNTLREDGCLQYRVT RHIASPFAEGESFPIVFNEIWQDMAAFEAHCQRAEIKAFFERYCLAEDGLAAKWNVCV YSDEPEQYDAPVKK" misc_feature 727584..>727820 /locus_tag="B565_0666" /note="Antibiotic biosynthesis monooxygenase; Region: ABM; cl10022" /db_xref="CDD:195949" gene 728066..729430 /locus_tag="B565_0667" /db_xref="GeneID:10486584" CDS 728066..729430 /locus_tag="B565_0667" /note="Part of a kinase, putative domain shared with transporter" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391319.1" /db_xref="GI:330828367" /db_xref="GeneID:10486584" /translation="MFVLIASLVFCLLCFALTRIPSTVPLSRKVLAGLLLGALFGLAL QLGWGADDAGVQQTLEWVNIIGGGYVSLLKVVMMPLVFTSILSAINKLEQAQSLGKIS AVLIGSMLTLVMIAGVVGMTITHLSGLTAAGLLSHGSDSATLQQSMSTIDSAQTLPAL LLSLVPTNFAADMAGSRSLSVIGVVIFTVLAGVALLQLKAEHPQAGARAAVAIDTLQL WVMKMVRVVIALTPYGVMALIARVVAHYPLSEILSLLGFILVCYVAILAMFAVHMVIL LLIGQNPLHYLREVWGVLTFAFVSRSSAASIPLSIETQQRLGVPASIANFAASFGANL GQNGCAGIYPAMMVAMIAPMLGINPFDPLFLLTLLPVIALGSIGVAGVGGGGTFAALI VLSTLNFPIALVGVMIAIEPLVDMGRTALNVNGSIMAAMITKRLLGKQQLANVETVQT QAAS" misc_feature 728072..729382 /locus_tag="B565_0667" /note="Sodium:dicarboxylate symporter family; Region: SDF; cl00573" /db_xref="CDD:193876" gene complement(729514..730041) /locus_tag="B565_0668" /db_xref="GeneID:10486585" CDS complement(729514..730041) /locus_tag="B565_0668" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391320.1" /db_xref="GI:330828368" /db_xref="GeneID:10486585" /translation="MMTLRSRTLLASLIAASFALAGCGDNQFEQEVKLEQSAVQLAQE AQQGGYQLLTVAELKTRMDKGEELVIIDTMPYEDSYKKEHIPGAKNFVFVKEAKSGDN WSEIVEGSGTAEQFQALLGEDKSRPVVIYCGFVKCGRSHNAAAWAVTQGYQQVYRVPG GIFAWKGAGYPVSAE" misc_feature complement(729544..729873) /locus_tag="B565_0668" /note="Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins...; Region: RHOD; cd00158" /db_xref="CDD:29073" misc_feature complement(729646..729648) /locus_tag="B565_0668" /note="active site residue [active]" /db_xref="CDD:29073" gene complement(730046..730465) /locus_tag="B565_0669" /db_xref="GeneID:10486586" CDS complement(730046..730465) /locus_tag="B565_0669" /codon_start=1 /transl_table=11 /product="methylamine utilization protein-like protein" /protein_id="YP_004391321.1" /db_xref="GI:330828369" /db_xref="GeneID:10486586" /translation="MPALLRMLANLALGGFFLASAGFKLVSPALFIEQIAAFGLIWPS LIPPVAWGLIALELCAGLAVIANRRWGLWLVIGLLALFIPVLGYGVAIGLDISCGCLG RADLSSLPEAIVRDLLLLTLAGALLRTSRPVFPVLKE" gene complement(730588..730941) /locus_tag="B565_0670" /db_xref="GeneID:10486587" CDS complement(730588..730941) /locus_tag="B565_0670" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391322.1" /db_xref="GI:330828370" /db_xref="GeneID:10486587" /translation="MAGQTATTLTINDELVLTLAEDEDHLVIYLLLPGHAMPNTPLLN HLGDEPVFLLDQTERGETLIWAREWLDHLTVDSLLVLLERAIELAAELLTHQHDREQS TQPQHPASTTATIRV" gene 731241..733343 /locus_tag="B565_0671" /db_xref="GeneID:10486588" CDS 731241..733343 /locus_tag="B565_0671" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391323.1" /db_xref="GI:330828371" /db_xref="GeneID:10486588" /translation="MKIASPDIDVSRHQQTSPDATPPATACLGNARLRLLDAGNREFD RGIRRGIGHRQSPELKAVKQAVRHYQAQPTPSLAGLAKIEQVLQFWIDSGKNRSRQQD PVLQKLVDDIAVRRQALAQGGKPPSFQLAWVCNEQGRVNQPIESNQQVRQWCSELARL QQEGANDLFKQELQGGLDLMFGVSEGMMARRLERVPTREEVAESHEWQLFCGTLRQAL PALGELKPQATAEENGRDILLTHSQLLELGHLKEVLDLSIQQQVSKQGEIGLLRTELL TALVDGLDEPWLEREAQEKALWQGEAASGKHYQSGVRAELKSSLSAASKELKPGEPVS HKAFGGLGLVSTSALVEAFAKIEIGKWEGRRDTPVGEFAGKVALTQENKASAKAELVI GKAEGSLVFNPVNKIVNDTDGSRYTPGPHDLSLLRIGASAELVSRLGLSVEGSWTIGN LLNAKLAGSAEVVANAKLEAGAAAIMTPNGPVVSVTANASAFAGMKAEGSAQLNLLKS QYADAYSLSAKVRASANLGVGASAGATAAFGPEGAKFHTTLGVTLGVGSDVGWEGGVN AMATKAYALELAARAVSNFDQRKGEQLDGLAMAAGNENRLFELAQRVDNRIVTLATQL DELQLAASENRIRMQESLIDPELAAGRTAMAQAIDDAFGQERVDEQGGVTVPERAAER NEKLELTARLLKDHAIRV" misc_feature <731829..>732137 /locus_tag="B565_0671" /note="exonuclease subunit SbcC; Provisional; Region: PRK10246" /db_xref="CDD:182330" gene complement(733403..734176) /locus_tag="B565_0672" /db_xref="GeneID:10486589" CDS complement(733403..734176) /locus_tag="B565_0672" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="YP_004391324.1" /db_xref="GI:330828372" /db_xref="GeneID:10486589" /translation="MNLAIYYIAFKSILAKEVSRFTRIWIQTLVPPAITMSLYFVIFG NLIGSRIGDMGGFTYMEFIVPGLIMMSVITNSYSNVASSFFSAKFQRNIEEMLVAPVP NYVIIAGYVGGGVARGLCVGLIVTLVSLFFVPLQIHHLFSVCFTVLLTAILFSLGGLI NAVFAKTFDDISIIPTFVLTPLTYLGGVFYSISLLPPFWQSVSQVNPIIYMVNAFRYG FLGISDVPLGTAYLIIIGFIVALYGIAWWLISRGTGLRH" misc_feature complement(733406..734176) /locus_tag="B565_0672" /note="ABC-2 type transporter; Region: ABC2_membrane; cl11417" /db_xref="CDD:196223" gene complement(734173..735090) /locus_tag="B565_0673" /db_xref="GeneID:10486590" CDS complement(734173..735090) /locus_tag="B565_0673" /codon_start=1 /transl_table=11 /product="multidrug ABC transporter ATPase" /protein_id="YP_004391325.1" /db_xref="GI:330828373" /db_xref="GeneID:10486590" /translation="MNALEISGLKKTYQGGVEALKGIDLTVRQGDFFALLGPNGAGKS TTIGVISSLVNKSAGKVKVFGYDIDSDLEQAKAQLGLVPQEFNFSQFEKVIQIVTHQA GFYGVPKAEAKIRAEKYLRQLDLWEKRDMPARTLSGGMKRRLMIARALMHEPKLLILD EPTAGVDIEIRRSMWTFLKDLNEQGVTIILTTHYLEEAEMLCRNIGIIDKGRLIENTS MKNLLGKLGRETFLLDLAPGSAVPEVPEFNGRMPDERTLEVDLDKSQSLNSLFEQLSN QQVQVVSMRNKANRLEELFVNLVEEGRKA" misc_feature complement(734188..735090) /locus_tag="B565_0673" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:31326" misc_feature complement(734425..735081) /locus_tag="B565_0673" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(734959..734982) /locus_tag="B565_0673" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature complement(order(734512..734514,734608..734613, 734839..734841,734956..734964,734968..734973)) /locus_tag="B565_0673" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature complement(734839..734850) /locus_tag="B565_0673" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature complement(734656..734685) /locus_tag="B565_0673" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature complement(734608..734625) /locus_tag="B565_0673" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature complement(734590..734601) /locus_tag="B565_0673" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature complement(734506..734526) /locus_tag="B565_0673" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene complement(735202..735732) /locus_tag="B565_0674" /db_xref="GeneID:10486591" CDS complement(735202..735732) /locus_tag="B565_0674" /codon_start=1 /transl_table=11 /product="hypoxanthine phosphoribosyltransferase" /protein_id="YP_004391326.1" /db_xref="GI:330828374" /db_xref="GeneID:10486591" /translation="MKHTVEVMISEAEVAARIAKLGEEITARYQGSDEVVMIALLRGS CIFLADLCRQCQLPLTLDFMTASSYGSGMHSTRDVRILKDLDDDIKGKDVVIVEDIID TGYTLNKVREILSLREPKSLAICTLLDKPSRREVQVPVDWIGFAIPDEFVVGCGIDYA QKYRNLPFIGKVVPQE" misc_feature complement(735214..735732) /locus_tag="B565_0674" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene 735934..736548 /locus_tag="B565_0675" /db_xref="GeneID:10486592" CDS 735934..736548 /locus_tag="B565_0675" /codon_start=1 /transl_table=11 /product="LitR, transcriptional regulator" /protein_id="YP_004391327.1" /db_xref="GI:330828375" /db_xref="GeneID:10486592" /translation="MEPRAEIRRRTRLSPEARRSQLMECAIEVFSRRGIGRAGHAEIA EQAKVSVATVFNYFNTREELVDEVLAEIERFVNQMLSQAYGDQGSIFDKIQRHVRLSV DAAYDQPDYAGIWLEWSSSVREEVWPRYTRLLDQCLELIASELQTAMDAGEITSVLSA QDLARSLTGFGYVMMQMINQPQRPVRQEVTDFLFKYVTAPIQAR" misc_feature 735958..>736308 /locus_tag="B565_0675" /note="transcriptional repressor BetI; Region: betaine_BetI; TIGR03384" /db_xref="CDD:132427" misc_feature 735997..736137 /locus_tag="B565_0675" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene complement(736622..737233) /locus_tag="B565_0676" /db_xref="GeneID:10486593" CDS complement(736622..737233) /locus_tag="B565_0676" /codon_start=1 /transl_table=11 /product="3-octaprenyl-4-hydroxybenzoate decarboxylase UbiX" /protein_id="YP_004391328.1" /db_xref="GI:330828376" /db_xref="GeneID:10486593" /translation="MNKAITLALTGASGAPYALRLLQCLVQADYRVYLLASSAARVVL KTEQQQDWPGSPKELSAYLCRQYGAKEGQIVACGKEEWFSPVASGSAAPKQMVVCPCS MGTVSAIANGTSDNLLERAADVVIKERGQLILVPRETPFSAIHLENMLKLARLGVTIM PAAPGFYHEPKSIEDLVDFMVARILDHLGVEHELTRRWGYGHQ" misc_feature complement(736625..737233) /locus_tag="B565_0676" /note="aromatic acid decarboxylase; Validated; Region: PRK05920" /db_xref="CDD:180312" misc_feature complement(736823..737221) /locus_tag="B565_0676" /note="Flavoprotein; Region: Flavoprotein; cl08021" /db_xref="CDD:195652" gene complement(737230..738600) /locus_tag="B565_0677" /db_xref="GeneID:10486594" CDS complement(737230..738600) /locus_tag="B565_0677" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramate-alanine ligase" /protein_id="YP_004391329.1" /db_xref="GI:330828377" /db_xref="GeneID:10486594" /translation="MHIHILGICGTFMGGLAVLAKQLGYRVTGSDANVYPPMSTQLEQ QGIELTEGYDPSQLDPAPDLVVIGNAMSRGNPCVEYVLDRNLPYISGPQWLLEHVLQD RWVLAVAGTHGKTTTASMLAWVLEYAKLEPGFLIGGVPGNFPVSARLGSAPFFVIEAD EYDCAFFDKRSKFVHYHPRTLVMNNLEFDHADIFPDLAAIQRQFHHLMRTVPSNGRVL FPQADDNLTAVRKMGCWSEVELVGQDDAKWQAVKLADDGSAFEVWLDGEKQGEVHWEC IGEHNVNNGLMAIAAARHAGVMVEHGIAALCQFKSPKRRMELKGEVAGISVYDDFAHH PTAIETTLGGLRAKVGCSRILAVLEPRSNTMKLGVHKEELAGCFDGADEVFFFQPPNI GWDLGEVTAHMTRPAKVFNDLETLINRLVAESRDGDHILIMSNGGFGGIHDKLIARLK DYHGEL" misc_feature complement(737251..738597) /locus_tag="B565_0677" /note="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Region: mpl; TIGR01081" /db_xref="CDD:130153" misc_feature complement(738316..738597) /locus_tag="B565_0677" /note="Mur ligase family, catalytic domain; Region: Mur_ligase; pfam01225" /db_xref="CDD:144716" misc_feature complement(737725..738279) /locus_tag="B565_0677" /note="Mur ligase middle domain; Region: Mur_ligase_M; pfam08245" /db_xref="CDD:191979" misc_feature complement(<737527..737667) /locus_tag="B565_0677" /note="Mur ligase family, glutamate ligase domain; Region: Mur_ligase_C; pfam02875" /db_xref="CDD:190458" gene 738859..739560 /locus_tag="B565_0678" /db_xref="GeneID:10486595" CDS 738859..739560 /locus_tag="B565_0678" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391330.1" /db_xref="GI:330828378" /db_xref="GeneID:10486595" /translation="MGKFLLCYLVGGLVAISWAALPAHGPWDQWDLTIFHTVNGWLGQ SALWADLVAITNNRLFDLAVLACMGLILARCFFARDLAGRRQLVAMGIVMLLSALVIN QLGHRLPVERPSPTLMVADALRVTQISAIPTKDSSGDSFPGDHALFLMIFAGYALRYL PRWAGVTALLMVPIFSAPRILAGAHWFTDVYVGALGLATLCLPWLLLTPLADRLIERI APRLARVPLLRSQTH" misc_feature 739132..739440 /locus_tag="B565_0678" /note="PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid...; Region: PAP2_like; cl00474" /db_xref="CDD:193835" gene complement(739630..740643) /locus_tag="B565_0679" /db_xref="GeneID:10486596" CDS complement(739630..740643) /locus_tag="B565_0679" /codon_start=1 /transl_table=11 /product="UDP-glucose 4-epimerase / UDP-N-acetylglucosamine 4-epimerase" /protein_id="YP_004391331.1" /db_xref="GI:330828379" /db_xref="GeneID:10486596" /translation="MTILVTGGAGYIGSHTLVELLNVGQQVVVLDNLSNSSPESLKRV EQITGKPVTFVEGDVLDRACLQQLFANHQIESVIHFAGLKAVGESSQIPLTYYQNNIS GTLVLCEEMARAGVFRLVFSSSATVYGDPASVPLREDFPTSATNPYGRSKLMVEEILR DLAKSDPRWAIVLLRYFNPVGAHESGLIGEDPNGIPNNLLPYISQVGVGKLKELGVFG NDYPTPDGTGVRDYIHVVDLAIGHLKALARIKSDTGVFTYNLGTGQGYSVLEMVKAFE AASGRPIPYQIKPRRPGDIAECWAEPTLARAELGWQAERGLEQMMVDTWRWQSNNPNG YQG" misc_feature complement(739633..740640) /locus_tag="B565_0679" /note="UDP-glucose 4-epimerase; Region: PLN02240" /db_xref="CDD:177883" misc_feature complement(739657..740640) /locus_tag="B565_0679" /note="UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs; Region: UDP_G4E_1_SDR_e; cd05247" /db_xref="CDD:187558" misc_feature complement(order(740107..740109,740113..740118, 740188..740190,740200..740202,740272..740280, 740347..740349,740392..740394,740398..740406, 740467..740475,740536..740553,740608..740619, 740623..740625)) /locus_tag="B565_0679" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:187558" misc_feature complement(order(740158..740166,740170..740175, 740182..740184,740194..740196,740203..740205, 740308..740310,740317..740322,740326..740331, 740338..740343,740350..740355,740362..740370, 740374..740376)) /locus_tag="B565_0679" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187558" misc_feature complement(order(740188..740190,740200..740202, 740272..740274,740344..740346)) /locus_tag="B565_0679" /note="active site" /db_xref="CDD:187558" misc_feature complement(order(739762..739764,739771..739773, 739840..739842,739948..739950,739954..739956, 739960..739962,739993..740004,740047..740055, 740110..740118,740200..740202,740266..740274)) /locus_tag="B565_0679" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187558" gene complement(740760..741749) /locus_tag="B565_0680" /db_xref="GeneID:10486597" CDS complement(740760..741749) /locus_tag="B565_0680" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster-binding protein" /protein_id="YP_004391332.1" /db_xref="GI:330828380" /db_xref="GeneID:10486597" /translation="MTYLTLTCIGRQQNTHDVVSWQLAPLSGSLPPVLAGQCITLHTE IDGQPEYRAYTLSSSPQDACWQVTIKDVGRVSRHLHQTLQVGDEIRVDGPFGDFNLTA LPCERPLLLSAGSGITPMWSMLRNELAKRPDADIRFIHSARSPADVIFADDLAAVAEA HAGVRHALILEDAPADHPWIGRLTPAMLAELAPDLRERHVYLCGPAPYMAAVRTMLTE LGLPPEQLHQESFGLPPAEPATTTNEHFWLTLKKSGKKVKILPGQTLLAALEAAGETI MAACRAGVCGSCRCTTTGDIERQSVMTLSAQDLESGVALACSCTAKGDIGLDY" misc_feature complement(740769..741749) /locus_tag="B565_0680" /note="HCP oxidoreductase, NADH-dependent; Provisional; Region: PRK10684" /db_xref="CDD:182647" misc_feature complement(741057..741734) /locus_tag="B565_0680" /note="Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron...; Region: FNR_iron_sulfur_binding_1; cd06215" /db_xref="CDD:99811" misc_feature complement(order(741057..741059,741063..741065, 741396..741398,741405..741407,741522..741530, 741534..741536,741540..741548,741585..741596, 741636..741638)) /locus_tag="B565_0680" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99811" misc_feature complement(order(741585..741590,741594..741596)) /locus_tag="B565_0680" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99811" misc_feature complement(order(741462..741464,741468..741470, 741492..741494,741513..741515,741522..741524, 741531..741533)) /locus_tag="B565_0680" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99811" misc_feature complement(order(741393..741395,741399..741410, 741420..741422)) /locus_tag="B565_0680" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99811" misc_feature complement(order(741135..741140,741321..741329, 741402..741407)) /locus_tag="B565_0680" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99811" misc_feature complement(740775..741008) /locus_tag="B565_0680" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature complement(order(740799..740804,740886..740897, 740901..740903,740910..740912,740919..740924)) /locus_tag="B565_0680" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature complement(order(740799..740801,740886..740888, 740895..740897,740910..740912)) /locus_tag="B565_0680" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" gene complement(741861..743513) /locus_tag="B565_0681" /db_xref="GeneID:10486598" CDS complement(741861..743513) /locus_tag="B565_0681" /codon_start=1 /transl_table=11 /product="hydroxylamine reductase" /protein_id="YP_004391333.1" /db_xref="GI:330828381" /db_xref="GeneID:10486598" /translation="MMFCVQCEQTIRTPAGNGCAYAQGMCGKTAETSDLQDVLIYTLQ GLSAWALAAREQGIMDREVDAFVPKAFFATLTNVNFDSNRIVAYVNQALAYRQQLANR LTAMAVQVNDLPQSAYFEPGAELLEQLAHAAPAAPNRGKSEVNEDIMGLRLLCLYGLK GAAAYMEHARVLDQQSDEVAAEFHRIMSWLSTDPSEMGRLFSCAMEIGQLNFKIMEML DLGETSAFGHPEPTRVRVTPIPGKCILVSGHDMMDLKLILEQTKGTGIHVYTHGEMLP ALAYPFFKQYPHLVGNYGSAWQNQQKEFANFPGAVVMTSNCIIDPNVGNYSDRIFTRS IVGWPGVTHLEGDDFSAVIAKAQALEGFKHTELEHFITIGFARNALMQAAPAVIEKVK AGEISHFFLVGGCDGDKAERAYFTEFAKAAPHDSLLLTLGCGKYKFNKLDFGDIGGIP RLLDVGQCNDAYSAIQLALALSEAFECGVNDLPLTLVLSWFEQKAIVILLTLLSLGVK DIRTGPTAPAFLTPALLKVLEEQFGLKGTTTAEADLAEILAA" misc_feature complement(741864..743510) /locus_tag="B565_0681" /note="hybrid cluster protein; Provisional; Region: PRK05290" /db_xref="CDD:179995" misc_feature complement(<743247..743510) /locus_tag="B565_0681" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" misc_feature complement(order(743370..743375,743382..743387, 743391..743393)) /locus_tag="B565_0681" /note="ACS interaction site; other site" /db_xref="CDD:73219" misc_feature complement(order(743352..743354,743361..743363, 743373..743375,743382..743384)) /locus_tag="B565_0681" /note="CODH interaction site; other site" /db_xref="CDD:73219" misc_feature complement(741870..743096) /locus_tag="B565_0681" /note="Hybrid cluster protein (HCP), formerly known as prismane, is thought to play a role in nitrogen metabolism but its specific function is unknown. HCP has three structural domains, an N-terminal alpha-helical domain, and two similar domains comprising a...; Region: HCP; cd01914" /db_xref="CDD:73287" misc_feature complement(order(742038..742040,742140..742142, 742215..742217,742299..742301,742563..742565, 742695..742697,742767..742769)) /locus_tag="B565_0681" /note="hybrid metal cluster; other site" /db_xref="CDD:73287" gene complement(743800..744270) /locus_tag="B565_0682" /db_xref="GeneID:10486599" CDS complement(743800..744270) /locus_tag="B565_0682" /codon_start=1 /transl_table=11 /product="DPS family protein" /protein_id="YP_004391334.1" /db_xref="GI:330828382" /db_xref="GeneID:10486599" /translation="MMKSPIGLDTAQSQALAAELNKLLASYQILYMNVRGFHWNIRGN QFFELHLKFEEIYNDLLLKVDALAERILTLDGVPMHSFSDYLQVSAIPEQKGLHDGRA CVESLLESFRELLVAQRRILGQAAEAGDEGTASILSDYVQQQEKLVWMLRAYLA" misc_feature complement(743806..744222) /locus_tag="B565_0682" /note="Ferritin-like domain; Region: Ferritin; pfam00210" /db_xref="CDD:189451" misc_feature complement(743806..744219) /locus_tag="B565_0682" /note="DPS protein, ferritin-like diiron-binding domain; Region: DPS; cd01043" /db_xref="CDD:153102" misc_feature complement(order(744064..744069,744076..744078, 744088..744090,744121..744123,744154..744159, 744163..744165,744175..744180)) /locus_tag="B565_0682" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:153102" misc_feature complement(order(744064..744066,744076..744078, 744109..744111,744121..744123,744157..744159)) /locus_tag="B565_0682" /note="DPS ferroxidase diiron center [ion binding]; other site" /db_xref="CDD:153102" misc_feature complement(order(743854..743859,743878..743880)) /locus_tag="B565_0682" /note="ion pore; other site" /db_xref="CDD:153102" gene complement(744423..745268) /locus_tag="B565_0683" /db_xref="GeneID:10486600" CDS complement(744423..745268) /locus_tag="B565_0683" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="YP_004391335.1" /db_xref="GI:330828383" /db_xref="GeneID:10486600" /translation="MAGGWRWRCLLPLFFLPLVLLLGACTPSEYQLSTRYQSANQNER IAFLILHYTDEDDANSLRLLTELEHKVSAHYLIPRDSHETPLPVYQLVPDSARAWHAG RSRWHQYAGLNASSLGIEIVNLGYPAEDEPLAPDARRWQPYTPQQIAAVGALSRELVA RYQIPPTQVLGHSDVAPERKQDPGPHFPWRQLYLTYGVGAWPDEGRVAELLASPLPHW DAAMWQQQLARYGYGLPRSGQWDEQSRAVMGAFQLHFRASKVDSKPDRECQAILMALL EKYFP" misc_feature complement(744435..745184) /locus_tag="B565_0683" /note="N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]; Region: ampD; COG3023" /db_xref="CDD:32839" misc_feature complement(744711..745139) /locus_tag="B565_0683" /note="Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20...; Region: PGRP; cd06583" /db_xref="CDD:133475" misc_feature complement(order(744723..744725,744729..744731, 744753..744755,745050..745052,745116..745118)) /locus_tag="B565_0683" /note="amidase catalytic site [active]" /db_xref="CDD:133475" misc_feature complement(order(744723..744725,744753..744755, 745116..745118)) /locus_tag="B565_0683" /note="Zn binding residues [ion binding]; other site" /db_xref="CDD:133475" misc_feature complement(order(744723..744731,744741..744743, 744753..744755,744930..744932,744969..744974, 744993..744995,745050..745052,745062..745064, 745110..745115)) /locus_tag="B565_0683" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133475" gene complement(745345..745824) /locus_tag="B565_0684" /db_xref="GeneID:10486601" CDS complement(745345..745824) /locus_tag="B565_0684" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391336.1" /db_xref="GI:330828384" /db_xref="GeneID:10486601" /translation="MTNNDILRRLRYALTISNDQMVEMFAKGNLTVTHAQLHSWLMKE AAEGEEQEAGYVACPDSALSQFLDGFIIARRGVREDAPAQVIPNRINNNMILRKLRIG LNFKEEDMLGTLKLADFNLSKSELSALFRSKDHKHYQDCGDQILRNFLIGLTAKYRG" misc_feature complement(745348..745824) /locus_tag="B565_0684" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG4807" /db_xref="CDD:34416" misc_feature complement(745597..745818) /locus_tag="B565_0684" /note="Protein of unknown function (DUF1456); Region: DUF1456; pfam07308" /db_xref="CDD:191723" misc_feature complement(745348..745551) /locus_tag="B565_0684" /note="Protein of unknown function (DUF1456); Region: DUF1456; pfam07308" /db_xref="CDD:191723" gene complement(745914..748631) /locus_tag="B565_0685" /db_xref="GeneID:10486602" CDS complement(745914..748631) /locus_tag="B565_0685" /codon_start=1 /transl_table=11 /product="two-component system hybrid sensor histidine kinase/response regulator" /protein_id="YP_004391337.1" /db_xref="GI:330828385" /db_xref="GeneID:10486602" /translation="MTKYGLRARVLAFTILPTLIIGGLMAGYFTFHRYQQLENNLIDQ GINIIEPLAIASEYGMTQHSRESLKRLIGLTHRKNSPFIKSIAVFTQDNQLFVTSNYH RDFTRLRLPDGEPIPDLTSVTFQGDDIILRTPIQAETSLDGFPLPSDVEPPMIGYISM QMATDRAMLLQYRDTFFAVIMVLIGVAFSTLFGFRLVKSVTQPITNMVQAVHKIREGR LDTRVSGQLTGELDMLKNGINAMAKALSEYHEEMQQNIDQATSDLRETLEQIEIQNVE LDMAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQLLKTSLTPSQTDYMQTIEK SARNLLGIINDILDFSKLEAGKLQLEHIPFSLRDTLNETMHLLGPSAHDKQLELSLRV DADVPDYLTGDPMRLQQVLTNLTGNAIKFTEQGNVDVHIEQTGSGNHKVRLNVQIRDT GIGISQEQQHQLFQAFNQADSSISRRYGGTGLGLVITQKLVQQMGGQIRFESELGKGS IFSFSLDVEVSPLPQTDQLPLDRIRGKRLWLLEPDPFAQASLLALLAEWHLDVHPLTS DDPWPEMSEQEMVIIGSSTLHTPQQVIGRLDRLNGQQQNIIVLLSSHEPALYEAMLAH GAQHCLSKPVNHRKLLHALLSPESSRQKLPAQPAPRQLQPIKVLAVDDNAANLKLIAA MLKEMVSQVVVCKNGKEAVKQAQSQPFDIIFMDIQMPIMDGISATQAIRNQSLNTTTP IVAVTAHAIPGERERLIRQGMDDYLAKPIDESMLAQLITDFAHRRHQNNGAQQIDWTL AVRQAAGKEHLAREMLTMLLASFDEVEPVLDSALAGEIEDSEVLAQLHRLNGGCAYSG VPGLQRLLSQLEQQLRDGVPVSELEPELLELQDALELVRQEAPRYLGKA" misc_feature complement(745923..748631) /locus_tag="B565_0685" /note="hybrid sensory histidine kinase BarA; Provisional; Region: PRK11107" /db_xref="CDD:182968" misc_feature complement(748104..748541) /locus_tag="B565_0685" /note="Uncharacterized signal transduction histidine kinase domain (DUF2222); Region: DUF2222; pfam09984" /db_xref="CDD:150635" misc_feature complement(747891..748100) /locus_tag="B565_0685" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(747579..747767) /locus_tag="B565_0685" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature complement(order(747594..747596,747606..747608, 747615..747617,747627..747629,747636..747638, 747648..747650,747696..747698,747705..747707, 747717..747719,747726..747728,747738..747740, 747750..747752)) /locus_tag="B565_0685" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature complement(747732..747734) /locus_tag="B565_0685" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature complement(747090..747413) /locus_tag="B565_0685" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(747102..747104,747108..747113, 747126..747128,747132..747134,747180..747191, 747270..747275,747279..747281,747285..747287, 747291..747293,747372..747374,747381..747383, 747393..747395)) /locus_tag="B565_0685" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(747381..747383) /locus_tag="B565_0685" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(747183..747185,747189..747191, 747273..747275,747279..747281)) /locus_tag="B565_0685" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature complement(746697..747044) /locus_tag="B565_0685" /note="Uncharacterized domain of BarA-like signal transduction histidine kinases [Signal transduction mechanisms]; Region: COG4999" /db_xref="CDD:34604" misc_feature complement(746298..746630) /locus_tag="B565_0685" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(746328..746333,746340..746342, 746397..746399,746463..746465,746487..746489, 746616..746621)) /locus_tag="B565_0685" /note="active site" /db_xref="CDD:29071" misc_feature complement(746487..746489) /locus_tag="B565_0685" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(746463..746471,746475..746480)) /locus_tag="B565_0685" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(746325..746333) /locus_tag="B565_0685" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(<746058..746255) /locus_tag="B565_0685" /note="Histidine Phosphotransfer domain, involved in signalling through a two part component systems in which an autophosphorylating histidine protein kinase serves as a phosphoryl donor to a response regulator protein; the response regulator protein is...; Region: HPT; cl00086" /db_xref="CDD:193652" gene 748785..750107 /locus_tag="B565_0686" /db_xref="GeneID:10486603" CDS 748785..750107 /locus_tag="B565_0686" /codon_start=1 /transl_table=11 /product="23S rRNA (uracil-5-)-methyltransferase rumA" /protein_id="YP_004391338.1" /db_xref="GI:330828386" /db_xref="GeneID:10486603" /translation="MAQFFKPQKKSTQLQRIEFTIDTLDHHCVGIGRHQGKAIFVEGA LPGETVKARITEEKKQYGHAALQQVVTPAANRIAPFCSHYRECGGCSAQHMSVADQQA AKAAGLVSLFERLGNIKAPALEPVLTGEDRAYRRVCRLAIKFDKNGRCTRVGFRRRNS NDLVEIDSCPVLAEPLSALIAPLRECLNRLKSQRELGHAELIQAEQGIMMLLRHTGRP NEADRALLVEFAKAQGIDLYLQAADDRIEALQQQFSPSYSLDGLSLAFAPGDFIQVNG PINQSMVEQALKWLGASKDDKVLDLFCGIGNFTLPLARQAREVVGVEGELAMVQRAEE NARRNGITNARFYKADLSDDIVGMSWAREGFDLVLLDPARPGALEVMGHVVKLSPKRV VYVSCNPVTLARDSQVLVKGGYRLVRLGMLDMFPHTGHLESMALFERE" misc_feature 748788..750104 /locus_tag="B565_0686" /note="23S rRNA m(5)U1939 methyltransferase; Reviewed; Region: rumA; PRK13168" /db_xref="CDD:183875" misc_feature 748812..748976 /locus_tag="B565_0686" /note="TRAM domain; Region: TRAM; cl01282" /db_xref="CDD:120537" misc_feature 749673..749975 /locus_tag="B565_0686" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature order(749685..749705,749751..749756,749829..749837, 749895..749897) /locus_tag="B565_0686" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 750419..752632 /locus_tag="B565_0687" /db_xref="GeneID:10486604" CDS 750419..752632 /locus_tag="B565_0687" /codon_start=1 /transl_table=11 /product="GTP pyrophosphokinase" /protein_id="YP_004391339.1" /db_xref="GI:330828387" /db_xref="GeneID:10486604" /translation="MVAVRDIHLKDNFTLEEWVSSLSLSDSEKDQLRTVYQYCLTLGD EALTSKLLVRGIEMVGILQMLSMDIGTLKAAIIYPFVEAGLISQERMDEDFGSKIAKL VEGVLEMEAIRSLQTLHRSETSPEQVDNVRRMLLAMVEDVRAVVIKLAERIACLREAK TADEETRVLMAQEITNIYAPLANRLGIGQLKWELEDLAFRYLHPDTYKQIAKQLDEKR LDRERYIREFVQSLRNGLKEAGVDAEVYGRPKHIYSIWRKMQKKHLEFNELFDVRAVR VVTKRLQDCYAALGIVHTQFHHIPREFDDYVANPKPNGYQSIHTVVVGPEGKTVEIQI RTDQMHQDAELGVAAHWRYKEGAQAGGKANTFEDKIEWLRKLLAWQEDLSESGSLLED LRSQVFEDRVYVFTPKGDVIDLPAGATPLDFAYHVHSMIGHRCIGAKIDGRIVPFTYA LQTGDQVEVITQKEPNPSRDWMNPNAGFLRSSRARAKVATWFRKLDRDKNIVAGRELF EKELDRHNLSMSKIDKGNMLRRFNLESTDDLLAGIGSGDIRINQVLNYLDTCYNKPTA EEEDRRLLEKLEQKANAPMRHKPKDHIVVEGVGNLMTHIARCCQPIPGDSIQGFITMG RGVSIHREDCEQLKELSRRNPERLIDAVWGENYSGGYGLTIRIISNDRSGLLRDITTV LANEKINVMGVRSRSNVREQTAEIDMELEIYNINAFNRALAKLSQLNDVISAKRL" misc_feature 750419..752629 /locus_tag="B565_0687" /note="(p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional; Region: relA; PRK10872" /db_xref="CDD:182797" misc_feature 751082..751453 /locus_tag="B565_0687" /note="Nucleotidyltransferase (NT) domain of RelA- and SpoT-like ppGpp synthetases and hydrolases; Region: NT_Rel-Spo_like; cd05399" /db_xref="CDD:143389" misc_feature order(751160..751162,751166..751168,751229..751234, 751244..751246,751328..751330,751334..751336, 751349..751351,751355..751357,751361..751363, 751373..751375,751409..751411,751415..751417, 751421..751423,751445..751450) /locus_tag="B565_0687" /note="synthetase active site [active]" /db_xref="CDD:143389" misc_feature order(751160..751162,751328..751330,751334..751336, 751349..751351,751355..751357,751361..751363, 751373..751375,751409..751411,751415..751417, 751445..751447) /locus_tag="B565_0687" /note="NTP binding site [chemical binding]; other site" /db_xref="CDD:143389" misc_feature order(751229..751231,751409..751411) /locus_tag="B565_0687" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143389" misc_feature 751622..751801 /locus_tag="B565_0687" /note="TGS_RelA_SpoT: The RelA (SpoT) protein, also referred to as ppGpp hydrolase/synthetase, is a ribosome-associated protein that is activated during amino acid starvation and thought to mediate the stringent response. RelA contains a TGS domain, named...; Region: TGS_RelA_SpoT; cd01668" /db_xref="CDD:133438" misc_feature 752411..752626 /locus_tag="B565_0687" /note="ACT domain found C-terminal of the RelA/SpoT domains; Region: ACT_RelA-SpoT; cd04876" /db_xref="CDD:153148" gene 752706..753503 /locus_tag="B565_0688" /db_xref="GeneID:10486605" CDS 752706..753503 /locus_tag="B565_0688" /codon_start=1 /transl_table=11 /product="MazG protein" /protein_id="YP_004391340.1" /db_xref="GI:330828388" /db_xref="GeneID:10486605" /translation="MSQRYDLPQLLDIMARLRDPQNGCPWDLKQNFQTIVPHTLEEAY EVADAIETEDWQGLKGELGDLLFQVVFYAQLGKERGLFDFADIVDTVSEKLIRRHPHV FSDADLGDEKAVKANWEAEKAKERAALDKESVLDDIPLSLPALTRAAKIQKRCATVGF DWKTLGPVVDKIHEEIDEVMEEALMADVDEARVSDELGDLLFATVNLVRHLGKDPEQV LRGANAKFERRFRQVEQIIAAEGLKMTDCTLEKLDAAWDKAKETEQS" misc_feature 752706..753494 /locus_tag="B565_0688" /note="nucleoside triphosphate pyrophosphohydrolase; Reviewed; Region: mazG; PRK09562" /db_xref="CDD:181956" misc_feature 752793..753014 /locus_tag="B565_0688" /note="MazG nucleotide pyrophosphohydrolase domain; Region: MazG; cl00345" /db_xref="CDD:193780" misc_feature 753225..753392 /locus_tag="B565_0688" /note="MazG nucleotide pyrophosphohydrolase domain; Region: MazG; cl00345" /db_xref="CDD:193780" gene 753645..755282 /locus_tag="B565_0689" /db_xref="GeneID:10486606" CDS 753645..755282 /locus_tag="B565_0689" /codon_start=1 /transl_table=11 /product="CTP synthetase" /protein_id="YP_004391341.1" /db_xref="GI:330828389" /db_xref="GeneID:10486606" /translation="MTTKYIFVTGGVVSSLGKGIAAASLAAILEARGLDVTIMKLDPY INVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFIRTKMTRRNNFTTGRIYADVLRK ERRGDYLGATIQVIPHITNAIKERVIAGAEGHQVAIVEVGGTVGDIESLPFLEAIRQL AAEVGRNNAMFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRAIPA NERAKIALFCNVPERAVISMKDVDSIYKIPALLKSQNLDSYFTERFGLECKEADLSEW EQVIYEEANPTGEVTIGMVGKYVSLPDAYKSVNEALKHGGLKTRHSVNIKYIDSQDIE TRGAELLEGLDAILVPGGFGERGVEGKILAAQYARENKIPYLGICLGMQVAMIEFARN VAGMEGAHSSEFKKDCAYPVVGLITEWVDEEGNVETRTEKSDLGGTMRLGSQLCHLVE DSKVRQMYGSPTIYERHRHRYEVNNKLLPQIEAAGLKVTGLSADKKLVEIIEIPDHPW FVAAQFHPEFTSTPRDGHALFAGFVKAAGEYQKRNLK" misc_feature 753651..755273 /locus_tag="B565_0689" /note="CTP synthetase; Validated; Region: pyrG; PRK05380" /db_xref="CDD:180047" misc_feature 753654..754412 /locus_tag="B565_0689" /note="CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain. The enzymes hydrolyze the amide bond of glutamine to ammonia and glutamate at the glutaminase domains and transfer...; Region: CTGs; cd03113" /db_xref="CDD:48377" misc_feature order(753684..753686,753693..753704,753762..753764, 753768..753776,753852..753854,753858..753860, 753867..753872,754062..754064,754068..754070) /locus_tag="B565_0689" /note="Catalytic site [active]" /db_xref="CDD:48377" misc_feature order(753687..753701,753762..753764,754071..754073, 754203..754211,754311..754313) /locus_tag="B565_0689" /note="Active site [active]" /db_xref="CDD:48377" misc_feature order(753762..753776,754068..754073,754089..754091, 754203..754211,754311..754313) /locus_tag="B565_0689" /note="UTP binding site [chemical binding]; other site" /db_xref="CDD:48377" misc_feature 754512..755243 /locus_tag="B565_0689" /note="Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase; Region: GATase1_CTP_Synthase; cd01746" /db_xref="CDD:153217" misc_feature order(754692..754706,754779..754784,754791..754793, 754851..754853,755046..755057,755187..755189, 755193..755195) /locus_tag="B565_0689" /note="active site" /db_xref="CDD:153217" misc_feature order(754698..754700,754782..754784) /locus_tag="B565_0689" /note="putative oxyanion hole; other site" /db_xref="CDD:153217" misc_feature order(754779..754781,755187..755189,755193..755195) /locus_tag="B565_0689" /note="catalytic triad [active]" /db_xref="CDD:153217" gene 755372..756673 /locus_tag="B565_0690" /db_xref="GeneID:10486607" CDS 755372..756673 /locus_tag="B565_0690" /codon_start=1 /transl_table=11 /product="Enolase" /protein_id="YP_004391342.1" /db_xref="GI:330828390" /db_xref="GeneID:10486607" /translation="MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG SREALELRDGDKSRFLGKGVLKAIEAVNGPIAQALLGKDAKDQATVDQIMIDLDGTEN KSKFGANAILAVSLANAKAAAAAKGMPLYAHIAELNGTPGVYSMPLPMMNIINGGEHA DNNVDIQEFMIQPVGAKTLKEAVRMGAEVFHNLAKVLKSKGYNTAVGDEGGFAPNLKS NAEALEVIAEAVAAAGYKLGTDITLAMDCAASEFYDAEKKEYNLKGEGRVFTSNGFSD FLADLTTKFPIVSIEDGLDESDWEGFAYQTAELGKKIQIVGDDLFVTNTKILKRGIDN GIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQ IKTGSMSRSDRVAKYNQLIRIEEALGAKAPFRGLKEVKNQA" misc_feature 755372..756670 /locus_tag="B565_0690" /note="enolase; Provisional; Region: eno; PRK00077" /db_xref="CDD:178845" misc_feature 755387..756616 /locus_tag="B565_0690" /note="Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions; Region: enolase; cd03313" /db_xref="CDD:48188" misc_feature order(755393..755395,755399..755425,755435..755437, 755471..755473,755849..755857,755918..755923, 755930..755935,755942..755947,755984..755989, 756008..756010,756014..756016,756494..756502, 756569..756577,756581..756586,756593..756595, 756602..756607,756614..756616) /locus_tag="B565_0690" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48188" misc_feature order(755495..755497,756107..756109,756242..756244, 756323..756325) /locus_tag="B565_0690" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:48188" misc_feature order(755846..755848,755996..755998,756398..756400, 756482..756490,756551..756553) /locus_tag="B565_0690" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:48188" gene complement(756736..757557) /locus_tag="B565_0691" /db_xref="GeneID:10486608" CDS complement(756736..757557) /locus_tag="B565_0691" /codon_start=1 /transl_table=11 /product="putative hydrolase protein" /protein_id="YP_004391343.1" /db_xref="GI:330828391" /db_xref="GeneID:10486608" /translation="MQSQTHTYIVNDSPQPCLQAGSGEPLLLIHGALANHTLWLEHIE QLSRHYTVYAPTLRHFGEAGKNGPFGLETHASDLLALLKQLPCGPVHLAGWSYGADVA LTAALMAPEQFISLYLVEPGCPGALDEQGIAAFMADAGAMFGPVFGQVAEGLLQEAVA TLIDGSGGHAGYFAAQPLKWQQAQLAEADSLPKQLSQSERPDWSPGRLAMLNMPTCIV QGVDTRALFALVCEAIGNAIPACDRLQVPNAGHLYPIEQPALFVQHLQRWLEQQA" misc_feature complement(756766..757482) /locus_tag="B565_0691" /note="Alpha/beta hydrolase family; Region: Abhydrolase_6; pfam12697" /db_xref="CDD:193173" gene complement(757751..758236) /locus_tag="B565_0692" /db_xref="GeneID:10486609" CDS complement(757751..758236) /locus_tag="B565_0692" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004391344.1" /db_xref="GI:330828392" /db_xref="GeneID:10486609" /translation="MKPDLTGTRIILRTIGPQDAADLFEIYGNPLTMEFASDPCFTSP AMVAQMMASVVRLEQAGESLEWAIVEREGNKVIGTCGLHSFSEAGRYCEVGCLLNAAY WRRGFMSEALGLLFAHASTLGVTCLTADIDADNVRSIALFEKLGFKAHAGRYQRMLPF I" misc_feature complement(757793..758026) /locus_tag="B565_0692" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(758493..760754) /locus_tag="B565_0693" /db_xref="GeneID:10486610" CDS complement(758493..760754) /locus_tag="B565_0693" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391345.1" /db_xref="GI:330828393" /db_xref="GeneID:10486610" /translation="MNHKEIADAIRNKKFSELTLLDCPILLEQNKYYYGFRYFLLDAK GIDTSTALDDILKKHGSLSKAYEYLGTIARDIYPNIGDEYISESYFQRAVYYDINNTN AWWSLYRLNNDSDAFFKSLKLDYDANNFGLVSKKLNDTYLSLSYMPSDRQRKDDWSLL LQITQDDRVSLNDNGKQILALAYFHLGDFENGIDIINSLSKVHLNIASKYYTAHKIDK ETVISKISTHEKARFLLEEPEKLYKEYLDDVKESEQSILKSSLMEIAFKAKLHSDVIK IYCTNQESDEPFTYKLKSKTLFAISKFLLGENVDNGILQEIKNRSHIIDIESTGLYKV FLLAMHLNTLEGYFAEHRVLETPIHFNHEYQSAQELLDDPELTAHFLYDDLYQKYNKL EEDWNYTQSTSNLKQLLEKERDSLSKNERINIFRLEIQNENYESAFKRINEFHDRYEP TITTYNLLGVCLERQNQYSDAYHYYKAALELMKKHSEYSYVIIGNYLKCANKIKQTIP EGEYSSLREKLNLGLVSEFIWNMSIGGRHRIIYKYYPFNINTIDALVNQYFYFPSKDH LNDPIELPTLDGIGGDQLIDSDYRICSFTDNNNSMLMWSHYTQNHEGIMIEYKFGHEL PEGVGVSKVEYTNEHKKNKEQSKYLFNQYLLTKNRDWSYEKEIRLISYKRDKVYFEKC NHIQRDRNKIHAEILSITLGCKFPEAKLNLIKNIISTINNRKGAHEPKIKMRKAMISK DNPFKLEYFDLNL" misc_feature complement(758748..758948) /locus_tag="B565_0693" /note="Protein of unknown function (DUF2971); Region: DUF2971; pfam11185" /db_xref="CDD:151627" gene 761361..762536 /locus_tag="B565_0694" /db_xref="GeneID:10486611" CDS 761361..762536 /locus_tag="B565_0694" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391346.1" /db_xref="GI:330828394" /db_xref="GeneID:10486611" /translation="MKSQLKVALAMLALFVVQGCTAPDSSTKRNAPGPVLTVHYESAP LIPVTIAGEQYQFLLDTGASITFIDRRLASRFKALTLSELPRAYQADFATVNSVSSQL GSEQLGFVEPQPFSLGSVTIDDSDLWATVDFDLFSQSLGSRIDGILGIDTIRRFNWVF DRDKHQLTVLLTAPSAATFERCIGYEDSYNRSPAVYLTHGESSVRMYLDTGADQSYAD HAFIDFMASQKAISGEDATPRKGVDASGMVEGRDHILTGLHFDERQLGELRVSENSNE QYGLGLDFVNRFNRFAIMPGRMMLCYDADSLARKVPPILRNIGVRFDGEHLQIYYSDE RDLAPYGLANGDILEQINGVAYRPLEIDKVRELLSTGKPGSLKLRIVREGKPLDIAI" misc_feature 761490..761822 /locus_tag="B565_0694" /note="Bacterial aspartate proteases, retropepsin-like protease family; Region: retropepsin_like_bacteria; cd05483" /db_xref="CDD:133150" misc_feature 761538..761546 /locus_tag="B565_0694" /note="catalytic motif [active]" /db_xref="CDD:133150" misc_feature 761538..761540 /locus_tag="B565_0694" /note="Catalytic residue [active]" /db_xref="CDD:133150" gene complement(762577..763173) /locus_tag="B565_0695" /db_xref="GeneID:10486612" CDS complement(762577..763173) /locus_tag="B565_0695" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391347.1" /db_xref="GI:330828395" /db_xref="GeneID:10486612" /translation="MNKTLLATLLFAPLLASAATPSFDCTKASGSVETLICKDAGLAA LDNELAALYPKAIAALSPEQLKTERAMQRGWIKGRNDCWKGQDLRQCVEDNYLLRITE LQISGGQLMVPAPVNYKCGKNVMLSTYFYNDAKLPAAVINLSEGDKQQQVLAYEAPSA SGARYEGQNLTFFTKGDDATLERYGQPTLTCMENPTKG" misc_feature complement(762865..763104) /locus_tag="B565_0695" /note="Protein of unknown function (DUF1311); Region: DUF1311; cl01530" /db_xref="CDD:194158" misc_feature complement(762601..762822) /locus_tag="B565_0695" /note="Membrane-bound lysozyme-inhibitor of c-type lysozyme; Region: MliC; cl01604" /db_xref="CDD:194175" gene 763467..763847 /locus_tag="B565_0696" /db_xref="GeneID:10486613" CDS 763467..763847 /locus_tag="B565_0696" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391348.1" /db_xref="GI:330828396" /db_xref="GeneID:10486613" /translation="MFRLMTGALLAIMLSGCAAMFNGTSQQVSIRSQDPDAEIYVNDM LLGHGNVITSFKKKENYTITVKSADCYSVTVPVSKSFDATTLLGIFVDFGVVSILVVD GVGTGAWQKFDQNAFIVDPICKKA" gene complement(763980..764345) /locus_tag="B565_0697" /db_xref="GeneID:10486614" CDS complement(763980..764345) /locus_tag="B565_0697" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391349.1" /db_xref="GI:330828397" /db_xref="GeneID:10486614" /translation="MKKTISFAILHFGVAFTVAYLLTGELLTASLIALIEPAVNTVAF YFHDLGWHKFKPNHSLQAKTSSFAVVHFSVAFGVAFLLSGELLTGGVMAMIEPAINTL VFFFHERLWRARSQQLALA" misc_feature complement(764187..764345) /locus_tag="B565_0697" /note="Predicted membrane protein (DUF2061); Region: DUF2061; cl01257" /db_xref="CDD:154299" misc_feature complement(764013..764162) /locus_tag="B565_0697" /note="Predicted membrane protein (DUF2061); Region: DUF2061; cl01257" /db_xref="CDD:154299" gene 764537..764743 /locus_tag="B565_0698" /db_xref="GeneID:10486615" CDS 764537..764743 /locus_tag="B565_0698" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391350.1" /db_xref="GI:330828398" /db_xref="GeneID:10486615" /translation="MNINATLLGQFIALLMVIVGVIAWRLARRKSEHPALITLICSLL CLFPPFGLLALLLVALKQDLPARS" gene complement(764847..765701) /locus_tag="B565_0699" /db_xref="GeneID:10486616" CDS complement(764847..765701) /locus_tag="B565_0699" /codon_start=1 /transl_table=11 /product="protein involved in external DNA uptake" /protein_id="YP_004391351.1" /db_xref="GI:330828399" /db_xref="GeneID:10486616" /translation="MLSYRHAFHAGNHADVLKHAVQALIIESLKKKEKPFIVLDTHAG GGLYDLRGDWSQKKAEYADGIGRLWDERAQWSAMAPYLGVIEEMNSDGQLHYYPGSPE LSRRLTREQDKLALMELHNNEVEDLRANMGYDPRVAVHHRDGFEGLIALLPPTPRRGL VLIDPPYELKEDYFAVVDTLKKAQKRWATGIYALWYPILGQEADKSRDMLRAIKRENF GNVLVAELEVAGQTADWGMNGSGMLIISPPWMLDEQIEAFLKPLCAKLAQGTGAQYKV EWLNKAEG" misc_feature complement(764865..765698) /locus_tag="B565_0699" /note="Protein of unknown function (DUF519); Region: DUF519; cl04492" /db_xref="CDD:123118" gene complement(765695..766156) /locus_tag="B565_0700" /db_xref="GeneID:10486617" CDS complement(765695..766156) /locus_tag="B565_0700" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391352.1" /db_xref="GI:330828400" /db_xref="GeneID:10486617" /translation="MRDEQLMASERVAVHELPTPIGFWHWSGKVYGERSQDWLTVQEQ GGNVNLALLLHRLDQLGIVVDLTDLQPALVQTEAVLTPWRALRQSAKTRLDEQQYQSM LAHELELERLQQGVLLQILRSLSLFRGNSRNLLNYLSLLGAQQGPLRDLIC" misc_feature complement(765803..766090) /locus_tag="B565_0700" /note="Protein of unknown function (DUF2390); Region: DUF2390; cl02376" /db_xref="CDD:164018" gene complement(766149..768059) /locus_tag="B565_0701" /db_xref="GeneID:10486618" CDS complement(766149..768059) /locus_tag="B565_0701" /codon_start=1 /transl_table=11 /product="ABC transporter ATPase" /protein_id="YP_004391353.1" /db_xref="GI:330828401" /db_xref="GeneID:10486618" /translation="MIVASQIELIRGGRKLLDNASATIHPGHKVGLVGKNGCGKSTFF ALVRGELAIDSGTFSLPAGWQIAGVAQETPALDCSALEYVIDGDKEFRSLEAQLVQAE QDDNGLLVAELHGRLDTIGAYSIRARAAELLHGLGFSDDQLSSPVRSFSGGWRMRLNL AQALLCRSDLLLLDEPTNHLDLDAVIWLEKWLKGYQGTLVLISHDRDFLDSVISRIIH IENGKLNEYTGGYSDFELQRAEQLAQQQSMYEKQQREMSHMQAYVDRFRYKASKARQA QSRLKAMERMEKILPAHADSEFSFEFREPSALPTPLIAMENLSAGYGDKVILEKIKLN LVPGSRIGLLGRNGAGKSTFIKMLSGSNPPLSGKLEVSAGVSIGYFAQHQLETLRLDD SPLDHLARLAPDKTEQELRNYLGSFGFHGDKALDKVAPFSGGEKARLVLALITWQKPN LLLLDEPTNHLDLEMRHALTMALQGFEGAMVVVSHDRHLLRTTTDDFYLVHGGRVEPF DGDLDDYHKWLGEQEKEANAKPADGPVAANSAVARKDQKRREAEFRQATRPLRQKLEK LEASMEKLQGKLGDIESQLADPAIYEESAKTKLSDLLKSQGPLKEQLEEVELEWMSLS EELETMEQAFFA" misc_feature complement(766230..768059) /locus_tag="B565_0701" /note="putative ABC transporter ATP-binding protein; Provisional; Region: PRK10636" /db_xref="CDD:182605" misc_feature complement(<767847..768056) /locus_tag="B565_0701" /note="ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by...; Region: ABCF_EF-3; cd03221" /db_xref="CDD:72980" misc_feature complement(767391..>767612) /locus_tag="B565_0701" /note="ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by...; Region: ABCF_EF-3; cd03221" /db_xref="CDD:72980" misc_feature complement(767160..767411) /locus_tag="B565_0701" /note="ABC transporter; Region: ABC_tran_2; pfam12848" /db_xref="CDD:193322" misc_feature complement(766548..767123) /locus_tag="B565_0701" /note="ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by...; Region: ABCF_EF-3; cd03221" /db_xref="CDD:72980" gene 768214..768627 /locus_tag="B565_0702" /db_xref="GeneID:10486619" CDS 768214..768627 /locus_tag="B565_0702" /codon_start=1 /transl_table=11 /product="CBS domain-containing protein" /protein_id="YP_004391354.1" /db_xref="GI:330828402" /db_xref="GeneID:10486619" /translation="MHIRDIMTTRVATVSMDDRLSVIKDIFEQAHFRHLLVLEEEELV GVISDRDLFRAISPYLDSEAEMSRDTETLNKRAHQIMSRQLVTIAPHLTVRDGVKLML EKGVSCLPVLENGALVGIISWKDFLKAALESDALV" misc_feature 768220..768594 /locus_tag="B565_0702" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature 768238..768600 /locus_tag="B565_0702" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair_24; cd04637" /db_xref="CDD:73135" gene complement(768743..770404) /locus_tag="B565_0703" /db_xref="GeneID:10486620" CDS complement(768743..770404) /locus_tag="B565_0703" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391355.1" /db_xref="GI:330828403" /db_xref="GeneID:10486620" /translation="MTILLLEEDPLLRSAITRELTEQGVPADRIHYHSHPNHERSGLL ALLQQHAFDAIICQQDKQQDLDGARLLHEAHYLGLLQPGCVLLLLDADQSEQEFLPSD LYFSLYLPLPFMTQQLTAVLGQLVKLSNLTRTLAAPILLREWQLATALCEDLLFQREN RSLTPWLDRLKGYLLLQSAERITAAQHYALCANEYQASWPRAGLFYAMLGLGKLQSAQ TDLQRHQASVSMATRLELQLASQLHQHHWLAAWETMGELLRIRPHQPRWHQLAMLLGL VLQDEEKVLEQANSLTLRHFGEQRVRLAIDSFMLNASLAVLWHAPSSNRIRSLQQEWE HLKRTVHLQPHEYELLQALMLGLDYRFDEALILIAHHQPDEGSDNHLTLLLGFAVSQF CGLPHHAQRYLTQLTQYRVRVAPHPLTRQLFHHLVTELGQRLTAREQRLSELRQLRHK AMQASQYQTALQAGLQLLEEFPALPGDAWQLLELLQHCWPAGMAAPRVALLVDTLERR LKHSPAFLDQHAQQYQRTLQEIRTHLQPHLSGSGPSCLVAGQPEP" gene complement(770573..771040) /locus_tag="B565_0704" /db_xref="GeneID:10486621" CDS complement(770573..771040) /locus_tag="B565_0704" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391356.1" /db_xref="GI:330828404" /db_xref="GeneID:10486621" /translation="MPPIRAALLLATLLLGGCASSTTHQQLGAALNELEGELQRLEEE LAAMNGLHYQKAIDAPLSLRRALGAPQPTPEGLVPVASKLEDGPLLRYQYRLPAGMAS LPQDNLCQRYEFELRHLGRLGKLKLSWLGEQGKGSRLIRQSDCPFGTQIRPRQ" gene complement(771094..772470) /locus_tag="B565_0705" /db_xref="GeneID:10486622" CDS complement(771094..772470) /locus_tag="B565_0705" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator/class I and II aminotransferase family protein" /protein_id="YP_004391357.1" /db_xref="GI:330828405" /db_xref="GeneID:10486622" /translation="MTIWAPDLAAFDGPLYLKLVKAIEQGIANGELPPQTRLPTHRSL ADRLGVTVGTVTRAYSEAERRGLLAARVGHGTWVKGANTDPANEWVIRQEEGHRIELW QNLPVQLDRAAIIRPMLGEVADGDLNALLGYDKEAGRPDQRQQFVNWLAEQGVACSED RLLFSHGAQHGIMLALLATGCVGETILCEGLSYPGMLGNARQLKNQVVGLAMDEEGLL PEALDAACRTRRAKLLYLTPTLQNPTTAIMSLARREAIVAIARRHDLLIIEDDVNGLL PQQPVIPLVNLAPERVIYLGSLAKIACGGLRVGFVLTPPALRSAFAQTMRLSSWMVSP LLIELACKMVSQRQIMPLVEQQREILKRRGELLRHLLPAARWQPGSMHAWLPLPEPWR SQQFAAAADALDVGVASGEHFAAGQFAAPQGVRLSLSQPATDARVGEGLARLAQLLQG TPPSNPLL" misc_feature complement(771124..772437) /locus_tag="B565_0705" /note="Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:31361" misc_feature complement(772234..772431) /locus_tag="B565_0705" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature complement(order(772243..772254,772258..772263, 772291..772293,772300..772305,772309..772323, 772345..772350,772354..772356,772423..772425, 772429..772431)) /locus_tag="B565_0705" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature complement(771133..772176) /locus_tag="B565_0705" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature complement(order(771550..771552,771571..771576, 771580..771582,771652..771654,771745..771747, 771892..771894,771964..771972)) /locus_tag="B565_0705" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(771454..771456,771463..771465, 771550..771558,771673..771675,771862..771864, 771961..771963)) /locus_tag="B565_0705" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(771571..771573) /locus_tag="B565_0705" /note="catalytic residue [active]" /db_xref="CDD:99734" gene 772587..773183 /locus_tag="B565_0706" /db_xref="GeneID:10486623" CDS 772587..773183 /locus_tag="B565_0706" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391358.1" /db_xref="GI:330828406" /db_xref="GeneID:10486623" /translation="MTMEWYVTLFGFAVLTCGTPGPNNLMLTASGANFGVRRTLPHLL GVGLGQPVLQLVLALGLYPLFERWPLLRLGLQIFGSLYLLWLAWRIAVAGAPGDPARR ARPLTMLEGLGFQFLNPKAWMMGISAISLFSLPGASYWSSQLAVMVMFVLVALPVCFV WVLFGHQLSNWISSDRGWRRLNGSLGLLTALCVVMLWY" misc_feature 772587..773180 /locus_tag="B565_0706" /note="LysE type translocator; Region: LysE; cl00565" /db_xref="CDD:186083" gene 773381..773899 /locus_tag="B565_0707" /db_xref="GeneID:10486624" CDS 773381..773899 /locus_tag="B565_0707" /codon_start=1 /transl_table=11 /product="Lysine exporter protein" /protein_id="YP_004391359.1" /db_xref="GI:330828407" /db_xref="GeneID:10486624" /translation="MLLTSAGAAQGFRRTIPLLVGVVGGINLMILATALGLGVVFEKV PLLHDGLKLIGSAYLLWLAWKVATASGPAEGNRPLIPAHQGAMLQLLNPKAWMMALSA ISGFTLAGEAYWPSALWVLVIFFITGLYTGAFWVLFGAQVRQIIRTARGWRRFNLGMG LATAACVGMIWI" misc_feature 773381..773866 /locus_tag="B565_0707" /note="LysE type translocator; Region: LysE; cl00565" /db_xref="CDD:186083" gene 774026..774724 /locus_tag="B565_0708" /db_xref="GeneID:10486625" CDS 774026..774724 /locus_tag="B565_0708" /codon_start=1 /transl_table=11 /product="amino acid recemase" /protein_id="YP_004391360.1" /db_xref="GI:330828408" /db_xref="GeneID:10486625" /translation="MKCIGLLGGMSWESTVSYYQALNRGVRAQLGGLHSARVLLNSVD FAAIERLQHAGDWPATARLLAAEARKLQAGGADFLLIGTNTMHKVAPEIEAAIDIPLL HIADATAAKLRADGITRVGLLGTRFTMEQDFYKGRLQERFGLAVLVPDEAGRERVHRI IYDELCLGEIRASSRAEYLAIIEGLAAAGAEAVILGCTEIALLVGDARAAVPLYDTTA IHAEAAVALALAAD" misc_feature 774026..774676 /locus_tag="B565_0708" /note="Asp/Glu/Hydantoin racemase; Region: Asp_Glu_race; cl00518" /db_xref="CDD:193849" misc_feature 774026..774676 /locus_tag="B565_0708" /note="aspartate racemase; Region: asp_race; TIGR00035" /db_xref="CDD:129146" gene 774855..775961 /locus_tag="B565_0709" /db_xref="GeneID:10486626" CDS 774855..775961 /locus_tag="B565_0709" /codon_start=1 /transl_table=11 /product="acyltransferase family protein" /protein_id="YP_004391361.1" /db_xref="GI:330828409" /db_xref="GeneID:10486626" /translation="MTEVDRFADIRPYRDEEVPAAIERLIQDDEFIGAIAKYRFGSLM SWLGWAIRPLIRLFLRRKWSKVTTVHQVQMGVTRYMSRMIATSTKGVTFSGIEHLKKE QGYLFVSNHRDIAMDPAFVNWGLHTHGFDTVRIAIGDNLLRKPCATELMKLNKSFIVK RSAKGPREMMKALGELSAYIGNSVHEGHSIWIAQKEGRAKNGDDKTDPAILKMFYVDG KKQKIDFVDYMRSLNIVPVSISYELDPTDKAKARELYEKSVNGSYEKGEFEDIESIVA GIVGMKGRVHVSFGAPITEGFSDPDELAALIDKAIWSSYHLFPSNYLAADVSGKANTI EQAAFLTRQSEVPEEHKAIWRAMYAKPVENAKKA" misc_feature 775125..775733 /locus_tag="B565_0709" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" misc_feature order(775185..775187,775194..775196,775203..775205, 775266..775277,775440..775448) /locus_tag="B565_0709" /note="putative acyl-acceptor binding pocket; other site" /db_xref="CDD:153244" gene 776276..776746 /locus_tag="B565_0710" /db_xref="GeneID:10486627" CDS 776276..776746 /locus_tag="B565_0710" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391362.1" /db_xref="GI:330828410" /db_xref="GeneID:10486627" /translation="MITGSLNTLQRTPLPAPLARIMAEVVKSVAHWGDAPLGKTEIDG LNLFCLVSEELTEPAADRRGEFHQQYLDIQLLLRGAEWIGVGPHDYVSDGADHPHPDL WFVDDEQTSYLALQPGDFAIFWPGELHRPLCTFNQPATVKKLVVKVHKDLLAIA" misc_feature 776276..776692 /locus_tag="B565_0710" /note="Domain of unknown function (DUF386); Region: DUF386; cl01047" /db_xref="CDD:186309" gene complement(776832..777005) /locus_tag="B565_0711" /db_xref="GeneID:10486628" CDS complement(776832..777005) /locus_tag="B565_0711" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391363.1" /db_xref="GI:330828411" /db_xref="GeneID:10486628" /translation="MLRLYADSVVSSKRGWDSPAGGLWSQEGASNFSILALERVIATC GAYHWFQFLLLKE" gene 777021..778220 /locus_tag="B565_0712" /db_xref="GeneID:10486629" CDS 777021..778220 /locus_tag="B565_0712" /codon_start=1 /transl_table=11 /product="acetate kinase A and propionate kinase 2" /protein_id="YP_004391364.1" /db_xref="GI:330828412" /db_xref="GeneID:10486629" /translation="MSKLVLILNCGSSSLKFAVMDAETGEDMLSGLAECFNLDDARIK WKLHGVKGEAMLGAGAAHQEALDHIVGHILPQDPTLAEQLVAIGHRIVHGGEQFSRSV RIDDGVIAGIEAAIPFAPLHNPAHLIGIRAALKVFPQLSEKNVAVFDTAFHQTLPQEA YLYALPHKLYREHGIRRYGAHGTSHRYIAEEAAKELGKPLNELNIINCHLGNGASVCA IKNGESVDTSMGLTPLEGLAMGTRSGDIDPAVVFFMHDQLGYSVEQINHTLTRESGLL GMTEASSDCRYVTTNYATDAGAKRALDVFTYRVAKYVGAYAAAMDGRLDAVVFTGGIG ENAAMVREMVLNRLALFGFKVDKEANNAAVLGGEGRITTADSRCAMVIPTNEELVIAR DALSLVC" misc_feature 777027..778214 /locus_tag="B565_0712" /note="Acetokinase family; Region: Acetate_kinase; cl01029" /db_xref="CDD:194013" gene 778364..779605 /locus_tag="B565_0713" /db_xref="GeneID:10486630" CDS 778364..779605 /locus_tag="B565_0713" /codon_start=1 /transl_table=11 /product="Mechanosensitive ion channel" /protein_id="YP_004391365.1" /db_xref="GI:330828413" /db_xref="GeneID:10486630" /translation="MKEAFFNWLSGLGVEVTSLMALVIALGFIVITSLLLHMALHRVL LVRLVGILGKAKQVWLPPQLQQRLFNRLAFVLQGAVLLGQAEIWLPRQSDSLKLIEMV AQLWILLFLLLAFFALLDCLLSVSRYTRLGRDLPLRGIFQGAKLVGSILVGILMIALL LGKSPLFLFSGLGAMTAVLMLVFKDPILGLVAGIQLSANRMLSVGDWLQMDKYGADGE VTDIGLTTVKVSNWDKTITTIPTYALISDSFKNWQGMTESGGRRIKRSVNIDMTSVRF LTAEEQLQLKQAQLLAPYLSRKEQELSAYNQQLSDALSCPINGRHLTNLGTLRAYLDA YLRAHPGIRKDMTLMVRQLAPTSDGLPLEIYCFTATTAWADYEGIQADIFDHIFAIIE QFHLRLHQSPTGYDMRAWQRG" misc_feature 778796..779560 /locus_tag="B565_0713" /note="Mechanosensitive ion channel; Region: MS_channel; pfam00924" /db_xref="CDD:144501" gene 779793..780719 /locus_tag="B565_0714" /db_xref="GeneID:10486631" CDS 779793..780719 /locus_tag="B565_0714" /codon_start=1 /transl_table=11 /product="peptidoglycan-binding LysM" /protein_id="YP_004391366.1" /db_xref="GI:330828414" /db_xref="GeneID:10486631" /translation="MKLLRNSVATLCYSLLLTAAPVFAVEYALPAANSRLVGENLEYV VPAEENGQPLEAIAAKFQLGLTNMTEANPDADPLLVQTGEKLVIPQQLILPDAPREGI VLNVAEMRLYYYPKGKKVVEVLPIGIGQLGTDTPENWVTSVQRKKAGPTWTPTAKMHA EYAARGESLPAVWPAGPDNPMGLFALYIGKMYAIHGTNANFGIGLRVSHGCVRLRNDD IAYLFKQVPVGTRVQFVNQPIKASLEPNGVRYLEVHQPLSRSEEEFNSKLPAPLPMTP AVTRFIAHADSDSQLVKQALEQRNGMPMAINR" misc_feature 779826..780713 /locus_tag="B565_0714" /note="L,D-transpeptidase; Provisional; Region: PRK10190" /db_xref="CDD:182294" misc_feature 779919..780059 /locus_tag="B565_0714" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature order(779919..779921,779937..779939,779946..779948, 779961..779963,779970..779972) /locus_tag="B565_0714" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature 780096..780488 /locus_tag="B565_0714" /note="L,D-transpeptidase catalytic domain; Region: YkuD; pfam03734" /db_xref="CDD:190732" gene complement(780789..781682) /locus_tag="B565_0715" /db_xref="GeneID:10486632" CDS complement(780789..781682) /locus_tag="B565_0715" /codon_start=1 /transl_table=11 /product="YbjX" /protein_id="YP_004391367.1" /db_xref="GI:330828415" /db_xref="GeneID:10486632" /translation="MSSHLSHLRTLARRLHPVEESGHLIRRAKYVGRLWLNPGARALY RQQQEQPLLAQAISRFPDILEKPIHPYRHKGLRKRLRAGLLSGHYQQLARQLPKAQQL AIYSGRGLLLAQWQSDKLTAPLTLQLDYQTHMGKEGEMSLTLKLGDAALYYMALNLRP APNPTLEICSLQGGKGQSEEIKLVTKACGGLRPMSLLVYMAAELARGLACKSLLGIRT QSHVYQSSKRTADRVKFDLDGLWQEHQGSVQDELWMSLPLEMPRKTLEEIPSRKRASY KARYKLLDQLGSELQANLLRS" misc_feature complement(780801..781607) /locus_tag="B565_0715" /note="Protein of unknown function (DUF535); Region: DUF535; cl01128" /db_xref="CDD:154215" gene 782060..783526 /locus_tag="B565_0716" /db_xref="GeneID:10486633" CDS 782060..783526 /locus_tag="B565_0716" /codon_start=1 /transl_table=11 /product="Proline permease" /protein_id="YP_004391368.1" /db_xref="GI:330828416" /db_xref="GeneID:10486633" /translation="MVLIGFVAYRATRNFDDYILGGRRMGSWVTALSAGASDMSGWLL MGLPGAVFVSGISESWIAIGLVIGAYLNWRWVAGRLRVHTEKNRNALTLPDYFTYRFE DHSKVLRILSALVILLFFTIYCASGVVAGARLFESTFGMDYNTALWVGAAATITYTFF GGFLAVSWTDTVQATLMIFALILTPVFVIIAVGGVDSAMIEVAAKSATNLDMFKNLDV IAIVSLMAWGLGYFGQPHILARFMAADSHHSMANARRISMTWMVFCLAGAVAIGFFGL AYFARFPEVAAGVTGNPERVFIELSKILFNPWIAGVLLSAILAAVMSTLSCQLLVCSS AITEDLYKPFLRKNASQRELVWVGRLMVLLIAVIAIAVAMNPENRVLGLVSYAWAGFG AAFGPVVLLSVLWPRMTRNGALAGMLVGAITVIVWKQFGWLGLYEIIPGFLFALLAIV VGSLLGEAPSKAMLERFRDAEEEYNTPAESAGEPVAVN" misc_feature 782060..783499 /locus_tag="B565_0716" /note="Sodium:solute symporter family; Region: SSF; cl00456" /db_xref="CDD:186007" misc_feature 782069..783460 /locus_tag="B565_0716" /note="Predicted symporter [General function prediction only]; Region: DhlC; COG4147" /db_xref="CDD:33899" gene 783735..784052 /locus_tag="B565_0717" /db_xref="GeneID:10486634" CDS 783735..784052 /locus_tag="B565_0717" /codon_start=1 /transl_table=11 /product="cell division protein FtsB" /protein_id="YP_004391369.1" /db_xref="GI:330828417" /db_xref="GeneID:10486634" /translation="MRLFTLILILLLGGLQYDLWLGKNGLSDYQNLSEAISQQQRDNQ TLKDRNDLIYREIDDLTSGLEAIEELSRNDLGYIKQGETFYRIIPKEKDKETAPDDEP YDD" misc_feature 783735..784028 /locus_tag="B565_0717" /note="Septum formation initiator; Region: DivIC; cl11433" /db_xref="CDD:187037" gene 784045..784737 /locus_tag="B565_0718" /db_xref="GeneID:10486635" CDS 784045..784737 /locus_tag="B565_0718" /codon_start=1 /transl_table=11 /product="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" /protein_id="YP_004391370.1" /db_xref="GI:330828418" /db_xref="GeneID:10486635" /translation="MTDASRVSGLTAIVPAAGIGSRMGADCPKQYLQLAGKTILEHTL ERLLSHPAIAQVIVALAPHDRWFEALPVAADPRIVRVEGGAERAFSVLNGLHVAQGEW VLVHDAARPCLTHGDLDALIAAAMNCGGAILGSRVRDTMKRSDGEGNIIATVEREQLW HALTPQMFQTRALKRALEEGLLLGATITDEASAMERAGFTVRMVEGRADNIKVTRPED LSLAGLFLSQQA" misc_feature 784075..784710 /locus_tag="B565_0718" /note="CDP-ME synthetase is involved in mevalonate-independent isoprenoid production; Region: CDP-ME_synthetase; cd02516" /db_xref="CDD:133009" misc_feature order(784087..784089,784093..784110,784129..784131, 784294..784305,784312..784314,784363..784371, 784678..784680) /locus_tag="B565_0718" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133009" misc_feature order(784372..784374,784429..784431,784453..784455, 784459..784461,784513..784530,784606..784611, 784615..784620,784627..784629,784642..784653, 784663..784668) /locus_tag="B565_0718" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133009" gene 784884..785360 /locus_tag="B565_0719" /db_xref="GeneID:10486636" CDS 784884..785360 /locus_tag="B565_0719" /codon_start=1 /transl_table=11 /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" /protein_id="YP_004391371.1" /db_xref="GI:330828419" /db_xref="GeneID:10486636" /translation="MMRIGHGFDVHKFGGVGPCMLGGVPVPYEQGLVAHSDGDVVLHA VSDALLGAIGAGDIGRHFPDTAAEFKGIDSRILLRDVFARVQKAGYAIGNLDVTIIAQ APKMAPHIDAMCAVLAADLQCDLNRVNVKATTTEQLGFTGRKEGIATEAVVLLVKQ" misc_feature 784890..785348 /locus_tag="B565_0719" /note="MECDP_synthase (2-C-methyl-D-erythritol-2,4-cyclodiphosphate synthase), encoded by the ispF gene, catalyzes the formation of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MEC) in the non-mevalonate deoxyxylulose (DOXP) pathway for isoprenoid...; Region: MECDP_synthase; cd00554" /db_xref="CDD:100025" misc_feature order(784890..784895,784899..784901,784905..784907, 784911..784919,784929..784931,785034..785036, 785040..785045,785049..785054,785163..785165, 785169..785171,785175..785177,785196..785198, 785202..785204,785268..785270,785274..785279, 785286..785294,785331..785333,785337..785339, 785343..785345) /locus_tag="B565_0719" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100025" misc_feature order(784908..784910,784914..784916,785010..785012) /locus_tag="B565_0719" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:100025" misc_feature order(785052..785054,785058..785060,785184..785189, 785193..785204,785277..785285) /locus_tag="B565_0719" /note="CDP-binding sites; other site" /db_xref="CDD:100025" gene 785360..786418 /locus_tag="B565_0720" /db_xref="GeneID:10486637" CDS 785360..786418 /locus_tag="B565_0720" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase D" /protein_id="YP_004391372.1" /db_xref="GI:330828420" /db_xref="GeneID:10486637" /translation="MLEQLAYLHGAPTARGILKAEAADFVVNEDLGFEPCGEGEHIFV RVRKTGENTAWVAGLLADAAGVNRNAVTWAGLKDRHAVTEQWFGIHLPGKAEPDLSVI ESDSIQILQARRHNRKLRVGYLKGNHFTLRLTGLEQADGLEARLQAIATQGVPNYYGE QRFGRDGNNLEAAKAMFAGKRIKDRNKRSLYLSAARSMLFNAIVSARIEQGLAHQLLA GDCVMLKGSHSIFSEESVTPELEARLASGDVQLTAPQWGRGRLASQGAAAEFEQGVLA PYSDWCDGLEKAGLDQDRRPLLLKPEQMSWQLDGEALTLSFFLPAGAFATSVVRELMQ AEEADHGFRNQTDANSGQ" misc_feature 785363..786355 /locus_tag="B565_0720" /note="tRNA pseudouridine synthase D (TruD); Region: TruD; pfam01142" /db_xref="CDD:144656" misc_feature 785405..786052 /locus_tag="B565_0720" /note="PseudoU_synth_EcTruD: Pseudouridine synthase, TruD family. This group consists of bacterial pseudouridine synthases similar to Escherichia coli TruD. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to...; Region: PseudoU_synth_EcTruD; cd02575" /db_xref="CDD:73315" misc_feature 785432..785452 /locus_tag="B565_0720" /note="Permutation of conserved domain; other site" /db_xref="CDD:73315" misc_feature 785582..785593 /locus_tag="B565_0720" /note="active site" /db_xref="CDD:73315" misc_feature <786212..786358 /locus_tag="B565_0720" /note="PseudoU_synth: Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). Pseudouridine synthases contains the RsuA/RluD, TruA, TruB and TruD families. This group consists of...; Region: PseudoU_synth; cl00130" /db_xref="CDD:193668" gene 786399..787160 /locus_tag="B565_0721" /db_xref="GeneID:10486638" CDS 786399..787160 /locus_tag="B565_0721" /codon_start=1 /transl_table=11 /product="5'-nucleotidase surE" /protein_id="YP_004391373.1" /db_xref="GI:330828421" /db_xref="GeneID:10486638" /translation="MRILVSNDDGVHAEGIRALSEALRACGEVIVVAPDRNRSGASHS LTLEVPLRVTRIAENGFNGCESYAVKGTPTDCVHLAVNELVRPEPDMVVAGINHGANL GDDVIYSGTVAAATEGRHLGYPSIAISLVGKTHFATAAHYAALLVKGLMKHPLPADQI LNVNVPDLPLEQIKGIKTTRLGNRHRAESVICTEDPRGQPIYWIGPPGSQQDAGEGTD FAAIEQGYVSITPLTIDMTAYDSLAGLGAWLDLQG" misc_feature 786399..787148 /locus_tag="B565_0721" /note="Survival protein SurE; Region: SurE; cl00448" /db_xref="CDD:193823" gene 787168..787785 /locus_tag="B565_0722" /db_xref="GeneID:10486639" CDS 787168..787785 /locus_tag="B565_0722" /codon_start=1 /transl_table=11 /product="protein-L-isoaspartate O-methyltransferase" /protein_id="YP_004391374.1" /db_xref="GI:330828422" /db_xref="GeneID:10486639" /translation="MIVQRLLNQLIAQDIRDFRVLATIAKVPRQLFVDEAMAHKAWDN TALPIGHGQTISQPYMVARMTELLMQNNPAHVLEIGTGSGYQTAILAHLVEHVYTVER IKSLQFQARRRLRQLDLHNVSAKHGNGWLGWPNKGPYDAILVTAAASEIPTALTDQLA EGGRLVLPVGDSQQTLQLIERSGSQLTSRILEPVRFVPLIDGDVE" misc_feature 787177..787776 /locus_tag="B565_0722" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene 787782..788363 /locus_tag="B565_0723" /db_xref="GeneID:10486640" CDS 787782..788363 /locus_tag="B565_0723" /codon_start=1 /transl_table=11 /product="DedA family membrane protein" /protein_id="YP_004391375.1" /db_xref="GI:330828423" /db_xref="GeneID:10486640" /translation="MKLFSRLYVLVMQWARHKHAPWYLSITAFIESVFWPIPVDVMLA PMALAKPHKAWHYATLATVFSVLGALFGYALGYALWDPVVLPLVESVGYQDKIEIARN WFEQWGIWVIFIASFTPIPYKVFTVTAGLLQMALLPFIITSLIGRGMRFFLVAGLMRW GGEKMERKLMHYVDVLGWLCIGLAVVAYFWFSR" misc_feature 787791..788273 /locus_tag="B565_0723" /note="SNARE associated Golgi protein; Region: SNARE_assoc; cl00429" /db_xref="CDD:193815" gene 788406..789443 /locus_tag="B565_0724" /db_xref="GeneID:10486641" CDS 788406..789443 /locus_tag="B565_0724" /codon_start=1 /transl_table=11 /product="lipoprotein NlpD" /protein_id="YP_004391376.1" /db_xref="GI:330828424" /db_xref="GeneID:10486641" /translation="MVLSWLLLACSSSKNAAPVDGVDEGQFVSTIPARQSGAQVSAPI QGGSYVVKRGDTLYSIAFNSGNDVPSLASLNNISPPYNIYPGQRLRLDGSSASVGSSR SAGTYEVRRGDTLSSIGRQFGMTPQALAQSNNLSAPYALQPGQVLNVQTAGGGSTQMV AATRPATVTPVAVSRPSSGPRPLAEPSGSGQTTPFISQKSVAPAAPKEYAQVKEQKIN NSQSRLAWHWPAKGRIVEGFSVAEQGNKGIDIAGQKGQPVYAASSGKVVYAGSALRGY GKLIILKHDDDYLSAYAHNDELRVKEGDSVKGGSVIANMGSTDAPDVRLHFEIRYRGK SINPMSYLPKR" misc_feature 788406..789440 /locus_tag="B565_0724" /note="lipoprotein NlpD; Provisional; Region: nlpD; PRK10871" /db_xref="CDD:182796" misc_feature 788550..788678 /locus_tag="B565_0724" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature order(788550..788552,788559..788561,788568..788570, 788583..788585,788592..788594) /locus_tag="B565_0724" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature 788721..788852 /locus_tag="B565_0724" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature order(788724..788726,788733..788735,788742..788744, 788757..788759,788766..788768) /locus_tag="B565_0724" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature 789135..789419 /locus_tag="B565_0724" /note="Peptidase family M23; Region: Peptidase_M23; pfam01551" /db_xref="CDD:190031" gene 789489..790472 /locus_tag="B565_0725" /db_xref="GeneID:10486642" CDS 789489..790472 /locus_tag="B565_0725" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="YP_004391377.1" /db_xref="GI:330828425" /db_xref="GeneID:10486642" /translation="MSQEQLVMQDAELEFDAEPESHEVEELQEVAAEADETISDELLA PELNKVMDATQLYLGEIGFSPLLTAEEEVYYARRALRGDKAARKRMIESNLRLVVKIA RRYNNRGLVLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRT IRLPIHVVKELNVYLRTARELSHRLDHEPTAEDIAFALDRSVDDVNRMLKLNEKITSV DTPIGGDRDKALLDVLSDERGMGPELESQEDDMRSSIVHWLEELNPKQREVLARRFGL LGYEPATLEDVGAEIGLTRERVRQIQVEGLRRLREILLSQGLSIEALFRTN" misc_feature 789633..790460 /locus_tag="B565_0725" /note="RNA polymerase sigma factor RpoS; Region: rpoS_proteo; TIGR02394" /db_xref="CDD:131447" misc_feature 789642..789749 /locus_tag="B565_0725" /note="Sigma-70 factor, region 1.2; Region: Sigma70_r1_2; pfam00140" /db_xref="CDD:189414" misc_feature 789756..789968 /locus_tag="B565_0725" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature 789993..790217 /locus_tag="B565_0725" /note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539" /db_xref="CDD:146934" misc_feature 790242..790418 /locus_tag="B565_0725" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cd06171" /db_xref="CDD:100119" misc_feature order(790275..790277,790305..790307,790335..790340, 790368..790370,790374..790379,790383..790391, 790395..790400,790404..790406) /locus_tag="B565_0725" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:100119" gene complement(790587..791624) /locus_tag="B565_0726" /db_xref="GeneID:10486643" CDS complement(790587..791624) /locus_tag="B565_0726" /codon_start=1 /transl_table=11 /product="Xenobiotic reductase B" /protein_id="YP_004391378.1" /db_xref="GI:330828426" /db_xref="GeneID:10486643" /translation="MNTLFQPYRLNDTLTLANRFMMAPLTRCMAGPGLVPTEQMAAYY GRRADIGLIVSEAVIIRPDAQGYPNTPGLFTQAQIDGWKRVTSAVHAKGGKIFAQLWH VGRLSHPFFHQAEVLAPSAVAHEGTVPRMRELTYQVPRALTEAEIAQLVQDYATAAAN AIEAGFDGVEIHGANGYLIDQFLHHSTNLRTDNYGGSPEKMSRFALEVVDAISARIGG DRVGIRLSPGAYVHLAGSPEDRAVFDYLLGKLNDRPLAYIHLGIFDDNLTFDYLGGRA SDYLRAHYKGNLVGVGNYDAERAAAAIEANRFDLVAIGRPLIANPDYLAKVKNGEALV PYADTMLAELV" misc_feature complement(790626..791624) /locus_tag="B565_0726" /note="NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]; Region: NemA; COG1902" /db_xref="CDD:32086" misc_feature complement(790617..791618) /locus_tag="B565_0726" /note="Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a...; Region: OYE_like_FMN; cd02933" /db_xref="CDD:73381" misc_feature complement(order(790677..790685,790689..790691, 790749..790751,790953..790955,791328..791330, 791454..791456,791547..791549,791553..791555)) /locus_tag="B565_0726" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73381" misc_feature complement(order(790680..790685,790689..790691, 790749..790751,790932..790934,790953..790955, 791094..791096,791100..791102,791109..791111, 791301..791303,791322..791324,791328..791330, 791454..791456,791547..791549,791553..791555)) /locus_tag="B565_0726" /note="active site" /db_xref="CDD:73381" misc_feature complement(order(790680..790682,791094..791096, 791100..791102,791109..791111,791322..791324, 791547..791549)) /locus_tag="B565_0726" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73381" misc_feature complement(791094..791096) /locus_tag="B565_0726" /note="catalytic residue [active]" /db_xref="CDD:73381" gene 791824..792390 /locus_tag="B565_0727" /db_xref="GeneID:10486644" CDS 791824..792390 /locus_tag="B565_0727" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_004391379.1" /db_xref="GI:330828427" /db_xref="GeneID:10486644" /translation="MRIAEFDRDEVLRNAMEAFRAKGYAKTTMQELVAATGLHPGSIY GAFGNKRGLLLAAVDHYVEGKRTLRRSLLDNPSPLAGLAAYLDRIVGEALCGSCLVTR TMMELSEQDEELTQWVKGIYGELEQDLAELLTQAQAKGELAPDSNIHTLTALLLINLQ GLVTFAQCRPDRPLLDDVVAQLMRALRA" misc_feature 791845..792381 /locus_tag="B565_0727" /note="Transcriptional regulator [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:31500" misc_feature 791866..791994 /locus_tag="B565_0727" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene complement(792449..793402) /locus_tag="B565_0728" /db_xref="GeneID:10486645" CDS complement(792449..793402) /locus_tag="B565_0728" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_004391380.1" /db_xref="GI:330828428" /db_xref="GeneID:10486645" /translation="MKLHQLDLNLLLAFDALMTQGSVTRAAEALFISQPAMSHSLNRL RTFLGDPLLVRTPQGMLPTPRAQRLHLGVQQALRLLEQQLTEEEEFEPSQSKRRFVLC TTDYVECVLIPPLIQRLRGLAPGVTIEIRILRDTLPEAELASGEIDLVLGFDEYMQVP GYLGKETWLTEPLAGLVRADLPIAKSAPAGAEDDPSQWQERITLQQLIAMPHVFHSPL GTSEASLDRYLKSQGFSRTISVNSQSYMSAAAIVSQSDHLLVLPSMVAELLATHWPLK SLPLPEDVPDYHLNCVWHPVHAQQPALVWLKDLMKELVGPR" misc_feature complement(792452..793351) /locus_tag="B565_0728" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature complement(793202..793351) /locus_tag="B565_0728" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(792464..793111) /locus_tag="B565_0728" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold; Region: PBP2_Nitroaromatics_like; cd08417" /db_xref="CDD:176109" misc_feature complement(order(792536..792538,792737..792739, 792890..792892,793070..793072,793082..793087, 793091..793093)) /locus_tag="B565_0728" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176109" misc_feature complement(order(792641..792643,792650..792655, 792662..792667,792674..792688,792770..792772, 793007..793009,793013..793027,793031..793036, 793043..793048,793052..793057,793064..793069, 793076..793081,793088..793090)) /locus_tag="B565_0728" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176109" gene 793558..794655 /locus_tag="B565_0729" /db_xref="GeneID:10486646" CDS 793558..794655 /locus_tag="B565_0729" /codon_start=1 /transl_table=11 /product="Porphyromonas-type peptidyl-arginine deiminase" /protein_id="YP_004391381.1" /db_xref="GI:330828429" /db_xref="GeneID:10486646" /translation="MSIKTINSTPAADGFTMPAEWAHQQAVWMIWPFRPDNWRVAGRF AQETFAKVADAIGGATPVFMGVPAQFMEQARAIMPAHVTLVEMDSDDCWARDTGPTIV TNAAGECRGVDWGFNAWGGHKGGLYYPWNQDEEVAAQMLAQHGMARYDAPLILEGGSI HVDGEGTCLTTAECLLNENRNPHLTKEQIEAYLRDYLGVTSFIWLDEGVYMDETDGHI DNMCCFVRPGEVALHWTDDQNDPQYARSVAALKVLEAAVDAKGRKLKVWKLPQPGPLF CTEEESAGVESGSGVPREAEGRLAGSYVNFLITNDRIVYPLLDAATDGEAQRILEEIF PEHTVIGVPAREILLGGGNIHCITQQIPSGQ" misc_feature 793573..794652 /locus_tag="B565_0729" /note="Porphyromonas-type peptidyl-arginine deiminase; Region: PAD_porph; cl01113" /db_xref="CDD:186340" misc_feature 793579..794643 /locus_tag="B565_0729" /note="agmatine deiminase; Region: agmatine_aguA; TIGR03380" /db_xref="CDD:132423" gene 794783..796495 /locus_tag="B565_0730" /db_xref="GeneID:10486647" CDS 794783..796495 /locus_tag="B565_0730" /codon_start=1 /transl_table=11 /product="amidase family protein" /protein_id="YP_004391382.1" /db_xref="GI:330828430" /db_xref="GeneID:10486647" /translation="MIEVTEVSIAELRAALESGRTTAVELVKAYLARIEAYNGPETAT KLNALVVANPDALKEAEASDARRARGETLGPLDGIPYTAKDSYLVKGLTAASGSPAFK DLVAQRDAFTVERLRAAGAICLGKTNMPPMANGGMQRGVYGRAESPYNADYLTAPFAS GSSNGAGTATAASFSAFGLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTM DVVVPYARTMNDLLEVLDVVVADDADTRGDLWRMQPWVQLPKASEVRPASYLELAAKP DALKGKRLGVPRMFINKDELAGTSENPGIGGPTGQRIHTRETVISLWEQARQALEAAG AEVIEVDFPLVSNCEGDRPGAPTVFNRGIVSPEFLNDELWELSGWAFDDFLRANGDPK LNKLADVDGPKIFPHDPGTLPNREGDLAAGMDEYVNMAKRGLKSWDEIVTVPDGLRGL EKTRKLDLEDWMDGLKLDAVLFPTVADVAPADADVNPASADIAWSNGIWVANGNLAIR HLGVPTVTVPMGVMADIGMPVGLTFAGRAYDDNNLLRFASAFESTGSKRMVPPRTPPL GDIS" misc_feature 794783..796480 /locus_tag="B565_0730" /note="amidase; Validated; Region: PRK06565" /db_xref="CDD:180626" misc_feature 794855..>795826 /locus_tag="B565_0730" /note="GGCT-like domains, also called AIG2-like family. Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is...; Region: GGCT_like; cl11426" /db_xref="CDD:196230" misc_feature <796292..796435 /locus_tag="B565_0730" /note="GGCT-like domains, also called AIG2-like family. Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is...; Region: GGCT_like; cl11426" /db_xref="CDD:196230" gene complement(796664..797026) /locus_tag="B565_0731" /db_xref="GeneID:10486648" CDS complement(796664..797026) /locus_tag="B565_0731" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391383.1" /db_xref="GI:330828431" /db_xref="GeneID:10486648" /translation="MIEFSFHARKVNELCGFRKDNFNNINNLIVRISSNDPGNWETNY HNALNAFMHIKSYIIGNVQVMHRIIFPRSSACLQSTYVIISTDRHAEKTISICGLVFC FLNEVIPKIKEKHPEIKF" gene 797714..798478 /locus_tag="B565_0732" /db_xref="GeneID:10486649" CDS 797714..798478 /locus_tag="B565_0732" /codon_start=1 /transl_table=11 /product="CphA-like beta-lactamase" /protein_id="YP_004391384.1" /db_xref="GI:330828432" /db_xref="GeneID:10486649" /translation="MMKSWMKCTLAGAVVLMASFWGGSVRAAGISLKQVSGPVYVVED NYYVKENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVSSKPVLEVINTNYHTDRAG GNAYWKSIGAKVVSTRQTRDLMKSDWAEIVAFTRKGLPEYPDLPLVLPNVVHDGDFTL QEGKVRAFYAGPAHTPDGIFVYFPDEQVLYGNCILKEKLGNLSFANVKAYPQTIERLK AMKLPIKTVIGGHDSPLHGPELIDHYEELIKAAPQS" misc_feature 797864..798406 /locus_tag="B565_0732" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" gene 798694..799965 /locus_tag="B565_0733" /db_xref="GeneID:10486650" CDS 798694..799965 /locus_tag="B565_0733" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391385.1" /db_xref="GI:330828433" /db_xref="GeneID:10486650" /translation="MQYASLARLKQAFITGMWASLVSIVIGFAFKVWLAQWVAKGELA LFNSVVDLISLSFILMTGFRSSMVVSYSQTKNDRDIINIFRYFLIGIVLLTWGAVIPY IKHGLHIRVEYLQLVGVIFGLGLKVYFTNLVAMYRMYELSNRVTWLEPLANGLLFMAC YFGLGMDALPSLFYGLTFSSLAIAGYMYVSRRRAIATKPLAKVALGPEMVSYVKKSFT ASLEAGASILMIYITVLLTIRHFSIDELGDFQVVVRPIFTYMTTLFVFPIYRFVLPEL AVNLRNGDHHQIRLIRRWIFRLSAIVSLAFFGLMLLAGKPLVLLFFPADYVGAVPVLF HFSIFFIFMMLNGYQLAYIKAHGHFTQSLLIRLAGIVALVAAYYLVAEFTANVVAIIV ALGLGYMVMFILSTLAERQILRSLPLVLATR" gene complement(800049..801299) /locus_tag="B565_0734" /db_xref="GeneID:10486651" CDS complement(800049..801299) /locus_tag="B565_0734" /codon_start=1 /transl_table=11 /product="DEAD box family ATP-dependent RNA helicase" /protein_id="YP_004391386.1" /db_xref="GI:330828434" /db_xref="GeneID:10486651" /translation="MSTASFAELALSPRLQQTLTELGYAAPTPIQARAIPVILAGRDL MAGAQTGTGKTAAFVLPLLEQLLAQPQMESQRPIRALVLVPTRELAVQVAESVARYGQ GTGLTSTQVYGGVSIAAQVDALKNGVDLLIATPGRLLDHLRQGALSLDSLRHLVFDEA DRMLDMGFMDEITALLKQLPVDRQTLLFSATCDDNLFALSKVLLRDPELIEVAPRNTT AAEVEQRVYTVDSDRKLALVEHMLKVKGWAPALIFSRTRQGADKLAQQLGKSGINALA FHGDLSQSAREKVLLEFRAGTLQALVATDVAARGLDITDLNYVINLEFPFVAEDYVHR IGRTGRAGNKGLAITLFSPEDTPLLEKVEAVLDTRLPQQWFPGFEPDLTRFEPEPRRN SKAAQKQRARKQALAGNKGGKGKR" misc_feature complement(800190..801287) /locus_tag="B565_0734" /note="helicase 45; Provisional; Region: PTZ00424" /db_xref="CDD:185609" misc_feature complement(800667..801284) /locus_tag="B565_0734" /note="DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (...; Region: DEADc; cd00268" /db_xref="CDD:28928" misc_feature complement(801135..801149) /locus_tag="B565_0734" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28928" misc_feature complement(800817..800828) /locus_tag="B565_0734" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:28928" misc_feature complement(800727..800735) /locus_tag="B565_0734" /note="motif III; other site" /db_xref="CDD:28928" misc_feature complement(800250..800639) /locus_tag="B565_0734" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature complement(order(800382..800390,800463..800468, 800526..800537)) /locus_tag="B565_0734" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(order(800280..800282,800289..800291, 800301..800303,800364..800366)) /locus_tag="B565_0734" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene complement(801397..802866) /locus_tag="B565_0735" /db_xref="GeneID:10486652" CDS complement(801397..802866) /locus_tag="B565_0735" /codon_start=1 /transl_table=11 /product="diguanylate cyclase domain-containing protein" /protein_id="YP_004391387.1" /db_xref="GI:330828435" /db_xref="GeneID:10486652" /translation="MRWPLAFARQFIVKVAGLALLALTGLGTVFYYTYLTIQHDMDLI TARQKNVFEVFYQRAKILKVENITSYLAQHHLLDQPPPPNSVGSDYLYGYDLKSKYRF ADIPLQYPAANILNTFRYALSYPEVINIYTIWNDYRLIGMVADNNVLPARLAPIKVDL MTLPAWYHYFGCASFAPGRPLCSTDEAFVSDIEIDSFSMRNTIVMYFPFIHQSGRGGY KYGLLGIDIAVDEAFNDVLRPFDTINPTRTNISFEAAEPCRPRHLCLSKPFMRTKAGD DLYLKWSYSWVDFVKLALQSAAFKVYLIVLLLGMVAWKQIYLRLRTLAHTDHLTRLPR RDVLCQSLLHEHDYLMILDIDNFKSINDTYGHGVGDLALLAFARHLRSNIRKVDSAIR WGGEEFIVLFKGMEDDEMMIHSAGRLLDRPLGIPELPTPITFSAGVIRIRDYLSVTEA VHLADELLYHVKQHGKHNIACYEGKKIRLIRPLPDDAEA" misc_feature complement(801457..801894) /locus_tag="B565_0735" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(801679..801681,801808..801810)) /locus_tag="B565_0735" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(801676..801687,801691..801693, 801757..801759,801769..801771,801781..801786, 801793..801795)) /locus_tag="B565_0735" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(801616..801618,801703..801705)) /locus_tag="B565_0735" /note="I-site; other site" /db_xref="CDD:143635" gene complement(803023..803487) /locus_tag="B565_0736" /db_xref="GeneID:10486653" CDS complement(803023..803487) /locus_tag="B565_0736" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391388.1" /db_xref="GI:330828436" /db_xref="GeneID:10486653" /translation="MTQPVPEMMTLLLEIGEQSSQLWLSQPDAAPSHYPLAFGTHAIQ PGPFRNAPPTPLELERAIMVVEDELMRIAPQIPPGLQLTLRSQPSLAEVLGDNQLDRD LVEQAFGQLAAMAEGDPLAASLLPRDEHFAAVLLIVREWLHHLASESVLIVE" gene 803686..804594 /locus_tag="B565_0737" /db_xref="GeneID:10486654" CDS 803686..804594 /locus_tag="B565_0737" /codon_start=1 /transl_table=11 /product="acetolactate synthase 3 regulatory subunit" /protein_id="YP_004391389.1" /db_xref="GI:330828437" /db_xref="GeneID:10486654" /translation="MDIRTAPRAIVLALMLASGIAAANEALVIQTDFGLKDGAVSAMK GVAFGVDRTLPLYDLTHEIPAYNIWEASYRLYQTLQYWPKGTVFVSVVDPGVGTERKS VVLKTKSGQYIVTPDNGTLTLVAEHFGIEAVRQIDEKLNRLKGSEKSYTFHGRDVYAY TGARLASGAISYEQVGPLLPAEVVKIPYQPAVAEKDGTLKGTIPILDVQYGNVWTNID DALLTKAGINKGDNACIKIREGDVVKYDGKAPYVSSFGDVPEGQPLVYLNSLLQVSVA LNMDSFAAKHQVQSGANWHISLKKCS" misc_feature 803752..804582 /locus_tag="B565_0737" /note="Uncharacterized conserved protein [Function unknown]; Region: COG1912" /db_xref="CDD:32096" misc_feature 803761..804579 /locus_tag="B565_0737" /note="S-adenosyl-l-methionine hydroxide adenosyltransferase; Region: SAM_adeno_trans; pfam01887" /db_xref="CDD:190151" gene complement(804865..805041) /locus_tag="B565_0739" /db_xref="GeneID:10486655" CDS complement(804865..805041) /locus_tag="B565_0739" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391390.1" /db_xref="GI:330828438" /db_xref="GeneID:10486655" /translation="MHADPGGDLSHLELCTRPQSISHIDLNGQRNPGMSFRRHCWLRD GRFGRLDDRWGHIG" gene 805036..807822 /locus_tag="B565_0738" /db_xref="GeneID:10486657" CDS 805036..807822 /locus_tag="B565_0738" /codon_start=1 /transl_table=11 /product="cytochrome-c peroxidase" /protein_id="YP_004391391.1" /db_xref="GI:330828439" /db_xref="GeneID:10486657" /translation="MQQAIEPGQLTRITLPEGLQLDQPLELLGSDEGYLLRAVSVRVA DLSAGITLARRNSVPRLGLNEEETALFLLADQSGDGSLSQAEWGRAEEIRLQQQAALQ DYAAFLLAQRQPGAVLDYTDSWQMLLALRDDKQARSWYQRSNSAQIQSARTQLYPANP SQPDEPETADLLRLDEQGLLVVHGPWQCLHDVRTVSGVKGSQYWLYGSDTSALKVASQ PQLAAGLTACGRSDWRLPTLTEFERLLSSDKSAWRYPNIFAVSLPAQIWLQDGAGQPR LYQLATRTWLDEGEGSLLWYALAPYPVRPSVVRDSSKPDMAALRAQYSGSSAQWPAAR VDEGVEWQELGPLPAVPFPVDNPYSRAKVVLGQQLFFDKQLSKGRNISCASCHDPQKG WSDGLSVSVGHLGQKGNRNAPSILNSAFSSTQFWDGRVATLEEQSLHPIQNPIEMALS HDELLARLQASPDYQAAFATAFGDQGITLERIAKAIATFERTIISRGSDFERFVKGDS QALSDKALWGMHLYRTDGRCMNCHSGPLLSQHGFESVGLTYYGRGKLEDRGRFLQTRN KADIGRFKTPSLRDVAFTGPYMHNGIFPILAQRIGGSVQGVVAMYNFGVTKWSSGVGF PTGADQYDPFFPKASDHLHALGLSNDELDAIGEFLRSASAEPRRTPATVAELGVSEAD DPTPVGAVITGLAVLPAQPQLEVGRLLPLQLQWQLSDGSLGPLDGPVEWRSEQLEFAT VSPQGEVRGVAVGTARLVATTARHTLNVTVQVVDAQPDFARGCRQPELVAGKLAFVCQ LTRDEAERLSISYDGVSSDSDGDYNPFPLEYVTMGQARARDYCQQLVARGHDDWRLPT RAELEVLFAAYNKDGATDQLLQQQGWPLYNRYWSSDATANDDGELPLLDLSTGDPLWD LADEAHAATCVRAI" misc_feature 806116..806568 /locus_tag="B565_0738" /note="Di-haem cytochrome c peroxidase; Region: CCP_MauG; pfam03150" /db_xref="CDD:190544" misc_feature <807526..807624 /locus_tag="B565_0738" /note="Protein of unknown function (DUF1566); Region: DUF1566; pfam07603" /db_xref="CDD:148943" gene complement(808005..808565) /locus_tag="B565_0740" /db_xref="GeneID:10486656" CDS complement(808005..808565) /locus_tag="B565_0740" /codon_start=1 /transl_table=11 /product="transferase hexapeptide domain-containing protein" /protein_id="YP_004391392.1" /db_xref="GI:330828440" /db_xref="GeneID:10486656" /translation="MIRKNPSGHLPVIDESAYIDKTAIICGKVIIKENVFVGPYAVIR ADEVDANGEMEPIVIGANSNIQDGVVIHSKSGAAVTIGEYTSIAHRSIVHGPCEVGNR VFIGFNSVLFNCHIGDGAVVRHNSVIDGCDLPPEFYVPSTTRINQQSDLTHIPRVSVD AAEFSEDVAHTNIDLVKGYKALSNEF" misc_feature complement(808014..808565) /locus_tag="B565_0740" /note="Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]; Region: PaaY; COG0663" /db_xref="CDD:31007" misc_feature complement(808023..808541) /locus_tag="B565_0740" /note="Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide...; Region: LbH_gamma_CA; cd00710" /db_xref="CDD:100039" misc_feature complement(order(808245..808247,808284..808286, 808290..808301,808350..808352,808362..808367, 808428..808430,808434..808436,808440..808445, 808452..808454,808488..808490,808497..808502, 808506..808508,808512..808514)) /locus_tag="B565_0740" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:100039" misc_feature complement(order(808284..808286,808299..808301, 808350..808352)) /locus_tag="B565_0740" /note="active site" /db_xref="CDD:100039" gene 808769..809410 /locus_tag="B565_0741" /db_xref="GeneID:10486658" CDS 808769..809410 /locus_tag="B565_0741" /codon_start=1 /transl_table=11 /product="ribonuclease T2 family" /protein_id="YP_004391393.1" /db_xref="GI:330828441" /db_xref="GeneID:10486658" /translation="MKKMIALLAGGLLLSSAVQAKGEAGAFDYYAMALSWSPEHCAVK PADRDQCSRKLGFVLHGLWPQYDRGYPSNCTRERLNPDMESEFADLYPSRFLYRHEWE KHGTCSGLSQQAFHKLASDLRQKVKIPAAYQSPEEPLRKTSFQLKADLASANEWLAPD NITVACADGGRFLREVYICVNKEGTDAVTCSAEMQKRERRSCGQPDFLLRSVR" misc_feature 808847..809317 /locus_tag="B565_0741" /note="Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far. This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf...; Region: RNase_T2_prok; cd01062" /db_xref="CDD:29474" misc_feature order(808859..808861,808955..808957,809297..809299) /locus_tag="B565_0741" /note="B1 nucleotide binding pocket [chemical binding]; other site" /db_xref="CDD:29474" misc_feature order(808871..808873,808886..808888,809054..809056, 809291..809293) /locus_tag="B565_0741" /note="B2 nucleotide binding pocket [chemical binding]; other site" /db_xref="CDD:29474" misc_feature order(808937..808960,809054..809089) /locus_tag="B565_0741" /note="CAS motifs; other site" /db_xref="CDD:29474" misc_feature order(808946..808948,808955..808957,808961..808963, 809063..809068,809075..809080) /locus_tag="B565_0741" /note="Active site [active]" /db_xref="CDD:29474" gene 809542..810588 /locus_tag="B565_0742" /db_xref="GeneID:10486659" CDS 809542..810588 /locus_tag="B565_0742" /codon_start=1 /transl_table=11 /product="2-nitropropane dioxygenase, NPD" /protein_id="YP_004391394.1" /db_xref="GI:330828442" /db_xref="GeneID:10486659" /translation="MSLFAELGMRYLIIQAPMAGVQGSELALAVTRAGGLGSLPAAML TPAELRGELGRLAQSGLGPFNINFFCHRQREPDPVALARWQQRLAPYYAEFGLEPSAV TTAPSRAPFNEVHAAMVAEFRPAVVSFHFGLPAPELLVQVKAAGAKVFASATTVAEAV WLAHHGADAIIAQGLEAGGHRGHFLSDDLALQQSTLTLLAQILAVTDLPVIAAGGIVD GKGIANALAMGASAVQMGTAFLCCHEATTSALHRAAIHSPEGQQTALTNLFSGRPARG IVNRLMRDLGPLSDLAPHFPYASGALAPLRAAAEKAGDSGFSPLWAGQNVSGCRDLPA SELIACWVKEAGLG" misc_feature 809545..810573 /locus_tag="B565_0742" /note="Nitronate monooxygenase; Region: NMO; pfam03060" /db_xref="CDD:145943" misc_feature 809566..810372 /locus_tag="B565_0742" /note="2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin...; Region: NPD_like; cd04730" /db_xref="CDD:73392" misc_feature order(809590..809595,809746..809748,809929..809931, 809995..809997,810058..810060,810070..810075, 810178..810186,810241..810252) /locus_tag="B565_0742" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73392" misc_feature 810076..810081 /locus_tag="B565_0742" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73392" misc_feature 810079..810081 /locus_tag="B565_0742" /note="putative catalytic residue [active]" /db_xref="CDD:73392" gene 811185..812734 /locus_tag="B565_r010" /db_xref="GeneID:10486660" rRNA 811185..812734 /locus_tag="B565_r010" /product="16S ribosomal RNA" /db_xref="GeneID:10486660" gene 812953..813028 /locus_tag="B565_t019" /db_xref="GeneID:10489964" tRNA 812953..813028 /locus_tag="B565_t019" /product="tRNA-Glu" /db_xref="GeneID:10489964" gene 813458..816173 /locus_tag="B565_r011" /db_xref="GeneID:10490004" rRNA 813458..816173 /locus_tag="B565_r011" /product="23S ribosomal RNA" /db_xref="GeneID:10490004" gene 816285..816407 /locus_tag="B565_r012" /db_xref="GeneID:10489965" rRNA 816285..816407 /locus_tag="B565_r012" /product="5S ribosomal RNA" /db_xref="GeneID:10489965" gene 816590..817096 /locus_tag="B565_0743" /db_xref="GeneID:10489966" CDS 816590..817096 /locus_tag="B565_0743" /codon_start=1 /transl_table=11 /product="MutT/nudix family protein" /protein_id="YP_004391395.1" /db_xref="GI:330828443" /db_xref="GeneID:10489966" /translation="MFCPKCGGQTLQSVSPKEFRCGCGFHFFQNVATAVMVALCWQDE VLVAVRARNPGKGLLDLPGGFVDPGESLEAALVRELQEELGLDVSAHPCTYLGSFPNI YPYDGITYHTCDTFFAIVLSEKPVIQPADDVAACQWLKISDIPLPRFAFESTRTAMAR LQQSSLQA" misc_feature 816683..817072 /locus_tag="B565_0743" /note="Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly...; Region: Nudix_Hydrolase_22; cd04681" /db_xref="CDD:72916" misc_feature 816779..816847 /locus_tag="B565_0743" /note="nudix motif; other site" /db_xref="CDD:72916" gene 817229..819382 /locus_tag="B565_0744" /db_xref="GeneID:10486661" CDS 817229..819382 /locus_tag="B565_0744" /codon_start=1 /transl_table=11 /product="AsmA protein" /protein_id="YP_004391396.1" /db_xref="GI:330828444" /db_xref="GeneID:10486661" /translation="MKKIVLILLGIAVAALLAIVTLISLIDPNQFKPQLAEQVRKSTG RELVMAGEIDWRFWPSLGLSLEKVALRNPAGFAEPDLVRFEQGEASVALLPLFSHRLE VGKVTLSGAHLFIQTKADGSSNLSGLIKDATADASEPVVPATPAPTADSKPWQISLQG VALSQASALVQDDRSGTSLRLDRLDLDMGQLATGEWVPVALAAKGSADKLAFDVKGQT QIKLAQEVMASELKDLSLSGSLSAPSLRLDSFSIKGDRLAFGEWSNLTLALKGAKVEG QQALLAGSLEGTLKGRLDKEMKLAELSDVLLTAALEGDALPRPQMKLKLAGFARVELD KQLITLSKLVMSADEALLSGDGTVQLGATPAITFDLHGEKLDLDKWLAKSTPAPTAQP KEGKPAANAAASGSKAVTGKSETLSAVEPDLGALKGVDLDGRLQLGSLRLKGLDLGAV DLQVALAKGLLTLKQFSATVAGGQVNANGVLDARQQPATYKVHKQVAGVNIRPLLQTL AQSDLLEGKGDLDVQVQGRGLSALALRNGMQGKVTLKLSDGALHGINLPEMIREARAT LSGKGAEQVKEARKTDFSALTASFQIADGIARSNDIQLFAPALRVKGEGQTALVPQSL DFLFLTSIVESSKGQGGKDVDELKEITIPVRIGGHWQAPSYRLDVKALLSNNKLLEDK VRKEAERGLKKLLGDKADNEAVKGVADQLLKGLFK" misc_feature 817307..>817855 /locus_tag="B565_0744" /note="AsmA family; Region: AsmA; pfam05170" /db_xref="CDD:147383" misc_feature <818147..819361 /locus_tag="B565_0744" /note="putative assembly protein; Provisional; Region: PRK10833" /db_xref="CDD:182764" gene 819528..820910 /locus_tag="B565_0745" /db_xref="GeneID:10486662" CDS 819528..820910 /locus_tag="B565_0745" /codon_start=1 /transl_table=11 /product="putative sensor histidine kinase" /protein_id="YP_004391397.1" /db_xref="GI:330828445" /db_xref="GeneID:10486662" /translation="MRLILLLCSLICYGMAYPVLAGPLADRLAGELAELAPEQVLPLD EVQRLDRRLIAPDSLYPGWQRYPLRQLQAIYRYQQECGTENALPAEWLPLLLALCGQG AAPSTRWFAAHPIYPLGGSSAAHWLAGHPAAGLDALLHVRERRDRLGQLGELDDDNLD ALLRGDRWLLQSGQLWLLADGQWRRYGAGQWQPLAERFGVMLDSRVDGSCQERVGALC INERPTLHWQWLALASSLGFILLLGWASWQRWRLLRERRVALQMLTHELRTPIMALSG ISEELRHDFDRLPPSAQQSVGQLLGSVARLHQLAQASRHYLAAETLEDERVAVSLAEW LTLACERHGATFCLEREMTLALPFYWLDLALDNLLRNASQHGRAPVRICASWQAGRLI LAVSDGGELPSYRLATLLRRGARAEGLGLGLAIVRHLLRRLGGHLALSGPPTTFTLTL PCQLWSDIES" misc_feature 819681..820298 /locus_tag="B565_0745" /note="Domain of unknown function (DUF3404); Region: DUF3404; pfam11884" /db_xref="CDD:152320" misc_feature 820284..820454 /locus_tag="B565_0745" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature order(820302..820304,820314..820316,820326..820328, 820335..820337,820347..820349,820356..820358, 820410..820412,820422..820424,820431..820433, 820443..820445,820452..820454) /locus_tag="B565_0745" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature 820320..820322 /locus_tag="B565_0745" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" gene 820907..821554 /locus_tag="B565_0746" /db_xref="GeneID:10486663" CDS 820907..821554 /locus_tag="B565_0746" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_004391398.1" /db_xref="GI:330828446" /db_xref="GeneID:10486663" /translation="MKTILLVEDEALLAENLQRYLTREGYRCLWCDTLTAAEQQWLAA DLVLLDRTMPEGDALDWLPQWLARKALPVIVLTARVEVSDRVAGLDAGARDYLTKPFS HDELLARIRAQLRQLGDGTQAVGGLQLHPARMQASWQDAEVSFTPTEFALLTLLVRMA GRVLSREEILNRVWGYQAFPSTRTVDTHILQLRQKLPGLAIETVRGIGYRLEVPA" misc_feature 820916..821551 /locus_tag="B565_0746" /note="Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]; Region: OmpR; COG0745" /db_xref="CDD:31088" misc_feature 820919..821221 /locus_tag="B565_0746" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(820928..820933,821054..821056,821078..821080, 821135..821137,821192..821194,821201..821206) /locus_tag="B565_0746" /note="active site" /db_xref="CDD:29071" misc_feature 821054..821056 /locus_tag="B565_0746" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(821063..821068,821072..821080) /locus_tag="B565_0746" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 821201..821209 /locus_tag="B565_0746" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 821276..821539 /locus_tag="B565_0746" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cd00383" /db_xref="CDD:29475" misc_feature order(821342..821344,821399..821404,821456..821458, 821465..821467,821489..821494,821513..821515, 821528..821530) /locus_tag="B565_0746" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29475" gene 821635..822399 /locus_tag="B565_0747" /db_xref="GeneID:10486664" CDS 821635..822399 /locus_tag="B565_0747" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391399.1" /db_xref="GI:330828447" /db_xref="GeneID:10486664" /translation="MATDRLLEADRADPLQPATLALLQGDNRHAWQSLQQAWPALTSD AERRSWQGMLAALSAQHCGKDFPLTLPDGVSELRLELIQRDAPLLRDYRVQLTGEGPI TAAELIDPAGRDRLAGAQWEAEENSGVRVVGSDLPTPLPAGLYQLRLTVAGQRWQVAL PLPAVQDLDWLSRSPQAVANPPANPASCTPLWLDQAVLARPQFSLLWWHRIAPDEPVK WPAITPNSWRTLSLVQTSQRGQLVLQLSHSQAGPVE" misc_feature 821671..822354 /locus_tag="B565_0747" /note="Protein of unknown function (DUF2861); Region: DUF2861; pfam11060" /db_xref="CDD:151506" gene 822508..824709 /locus_tag="B565_0748" /db_xref="GeneID:10486665" CDS 822508..824709 /locus_tag="B565_0748" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391400.1" /db_xref="GI:330828448" /db_xref="GeneID:10486665" /translation="MTLLPVLTSRIRPLLLLAPLFSLPAEALTLANDQWRIELDPATL AAEAVLPSGKHLLISSPGPRQPVTVLQQEGERASWLTRADGEVRALARLEGNRLILTL SRASAGELVWPRVPAGAQALMLPIHEGFRIPATHTAWRKALAQEYQGINTTDNLTLPV VGLDHGDQQLAILFANPFNNRLTFAPKKDGIALTATHSVNRLNQAAPYEVAVSLQPGN DWLAAGKAYRHWLQARGELVSLESKLAAVKDGRRLIGASHLYLWGERLLVPQDVKSWP ALRRLIPADWLKGESKRALQAPDLARNRYLQNRVLAGVEQALALRHPGQQPADFAARR ALAARQLGAALNEPQSWGDGSSAKMIYALKQADLPRLWLGLPQWTAGFAASEGIELAK AAGYLIAPYDSYDTALPEGNRQQSWLTAQMGQDIYLRCGIMQENGRRKSGFQNSGVYT NQACVRPVMEQRVPKLQQASHYNSWFLDVAATGMVFDDFDPAKPTSQAQDAQNRMAGI AWIARSQGVLVGSEEGGSVANRTAAFAHGPQTSGFGWQDPDMRRNKRSPYYLGVWYPD YQPAFFFRQSHLKPEYQGLYFDPALRLPLLQSVFHDSIVTTHHWTMDSLKFRESRQVT ELLQQLYNVPPLLNMSLDSASVRIPYLRRLDAFFRPLHERLYNQPLTGFRWLDKRGVV QQSEFADGTRLVANFGPATELAGIKLAAQSVLALLPDGSQQQFVSQPDGAR" misc_feature 823555..824601 /locus_tag="B565_0748" /note="Protein of unknown function (DUF3111); Region: DUF3111; pfam11308" /db_xref="CDD:151749" gene 824769..825335 /locus_tag="B565_0749" /db_xref="GeneID:10486666" CDS 824769..825335 /locus_tag="B565_0749" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004391401.1" /db_xref="GI:330828449" /db_xref="GeneID:10486666" /translation="MNVLQNGLEVVLMIESEVIREVNHPAWPLVWQIYGESFPRYEQR QSQHQPQKMRDPRYHCQIFYQDGLLLGFIFWWACGEQIYIEHLAINPALRGRNYGSRL LAEFCEQAGKTVILEIDPPEDEIAIRRLRFYQGLGFCLNDYAHVHPPYHPDYQGHTLR VLSYPGLLEEEAYQRFNSMLVETVMDHG" misc_feature 824958..825182 /locus_tag="B565_0749" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(825424..828297) /locus_tag="B565_0750" /db_xref="GeneID:10486667" CDS complement(825424..828297) /locus_tag="B565_0750" /codon_start=1 /transl_table=11 /product="glutamate-ammonia ligase adenylyltransferase" /protein_id="YP_004391402.1" /db_xref="GI:330828450" /db_xref="GeneID:10486667" /translation="MAQHSPSFSALSPLLQEQAERQWQRLVELAPDYGSLPEPVRQTL LTLLGLSDFVADSLFKQPELLTELLASGDLEQAERWPAYQRALTALLAEVSDEEALKR ILRQFRRSRMLVIAWRELLGHSEVEESFIHLTKLADALICSARDWLYAKQCGELGTPM DGNGNPQPLLILGMGKLGGGELNFSSDIDLIFTFPENGYTVGGRRELANQQFFIKLGQ RIINALHQPTQDGQVFRVDMRLRPFGDAGPLAISFAAMEDYYQHHGRNWERYAMVKAR VLGPQCEHAVELAEMLRPFVFRRYIDFGVIDGLRQMKAMIAAEVRRKGLEGNIKLGAG GIREVEFIAQALQLIRGGREPALRVRHLPEALAAIAQCGALESAHCDRLLDAYRFLRR VENILQEIGDQQTQTLPTEERDRQRLIAALGFADWGAFMAHLDEEMAAVHQEFAAVVG EEKEAPAHLEQLWLDLWRTELDAAELEKLLTAQGVAEPAPLCAALLRFKEEYKRRQVG PQGRIALDWLMPELLRLVVASEQPSRLFERVCELLTRIFTRSAYLQLLAENPGALRQL VRLCDASHLVSEQLARYPILLDELLDPQHLYHPTPLDQYKPQLRQFLLRIPEEDVEQQ MEALRQFKQVQLLRIVAADIAGALPLMKVSDHLTWLAEAITEEVVNQAWAQMSERYGV PPEVALSGQRGFAVVAYGKLGGIELGYGSDLDLVFLHGGDPNSYTDGRKPIDSRQFYL RLAQRILHLFSTRTPSGILYEIDMRLRPSGDSGLLVSSLSAYEQYQQNEAWTWEHQAL VRARPIYGDDAIVAEFARIRRDVLAKERDLPTLAREVREMRHKMRDHLLKAGAGEFDL KQSPGGMVDIEFIAQYLVLAHACGEPDALTRWSDNVRIFDECVMAGVLTLEQAEGLKQ AYLEIRNLGHRLNLSEISRKVSDDQLQSERSHVLAVWRTLLGE" misc_feature complement(825430..828264) /locus_tag="B565_0750" /note="bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; Reviewed; Region: PRK11072" /db_xref="CDD:182946" misc_feature complement(827401..827982) /locus_tag="B565_0750" /note="Nucleotidyltransferase (NT) domain of Escherichia coli adenylyltransferase (GlnE), Escherichia coli uridylyl transferase (GlnD), and similar proteins; Region: NT_GlnE_GlnD_like; cd05401" /db_xref="CDD:143391" misc_feature complement(order(827587..827589,827731..827733, 827737..827739)) /locus_tag="B565_0750" /note="metal binding triad; other site" /db_xref="CDD:143391" misc_feature complement(826951..827370) /locus_tag="B565_0750" /note="GlnD PII-uridylyltransferase; Region: GlnD_UR_UTase; pfam08335" /db_xref="CDD:149407" misc_feature complement(825835..826410) /locus_tag="B565_0750" /note="Nucleotidyltransferase (NT) domain of Escherichia coli adenylyltransferase (GlnE), Escherichia coli uridylyl transferase (GlnD), and similar proteins; Region: NT_GlnE_GlnD_like; cd05401" /db_xref="CDD:143391" misc_feature complement(order(826009..826011,826156..826158, 826162..826164)) /locus_tag="B565_0750" /note="metal binding triad; other site" /db_xref="CDD:143391" misc_feature complement(<825520..825801) /locus_tag="B565_0750" /note="GlnD PII-uridylyltransferase; Region: GlnD_UR_UTase; pfam08335" /db_xref="CDD:149407" gene complement(828457..828903) /locus_tag="B565_0751" /db_xref="GeneID:10486668" CDS complement(828457..828903) /locus_tag="B565_0751" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004391403.1" /db_xref="GI:330828451" /db_xref="GeneID:10486668" /translation="MQQNATHPPLELSDDKGQLDVPLIHRFLSQEAYWCRGIPHSTVV RAINHSLCVGGYVDGQQVAFARVITDKATFGYLADVFVLPEYRGRGYSKALVATIVDH PELQGLRRLALATSDAHGLYAGFGFAPPASPDSLMEIYNPAIYQRT" misc_feature complement(828565..828750) /locus_tag="B565_0751" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cd04301" /db_xref="CDD:173926" misc_feature complement(order(828625..828630,828658..828666)) /locus_tag="B565_0751" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene complement(828987..830237) /locus_tag="B565_0752" /db_xref="GeneID:10486669" CDS complement(828987..830237) /locus_tag="B565_0752" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004391404.1" /db_xref="GI:330828452" /db_xref="GeneID:10486669" /translation="MQLNLLEKRMSNIRLVPKVVLLMVFSTLLLLTKLWFDANNLEAT LLSEGLDPAKADAISNRLLWTGLMETAIMGLLFVILLLTGSRLMVKQVHYLVGLLERF AKRDLSHKVLLKSRDEFGDIAKAVSHSQENLKEVFGNQRAACKELNDIASQVTLCMEE ANEAINEEFTQIEQLASAMSQMVGAIREVAAHADQASHATAETSQLAEEGSRCVADTV STIDTLSGNIQRSATVVNEVEQGVERIGSVVDTIRGISEQTNLLALNAAIEAARAGEA GRGFAVVASEVRELANRAQAATVEIQKMIEQLQGNAHQAGELMAQSVQQADKGVEQVT QAGTQLATIVQRVQGVADMNRHIAAASEQQSSVAEEMRGNLEQVKQIAEGSVVVLREL QEASELVEQHSKELDSQIQSFKLV" misc_feature complement(829833..830030) /locus_tag="B565_0752" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(828996..829766) /locus_tag="B565_0752" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(828993..829631) /locus_tag="B565_0752" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 830339..831091 /locus_tag="B565_0753" /db_xref="GeneID:10486670" CDS 830339..831091 /locus_tag="B565_0753" /codon_start=1 /transl_table=11 /product="Ion transporter" /protein_id="YP_004391405.1" /db_xref="GI:330828453" /db_xref="GeneID:10486670" /translation="MRHHLTHLRAMDLLMAFLSIISVVLVTARWWGHESLTPQTLQLF YDLDSLICYFFLAHFAYGWIRASDRKAYFKANWIYLPGSLPMAEQLRWARLIQLWRVY QLFKEHPDLWAMFRRERNETTLSGILFLFFLLLGVGSGVMYWIESGQPGSQIETPYDA FWWTLVTLSTVGYGDLVPKTEEGRFVASLLILFGVGLFGAISGFMASLFLQPNKGDGE TDKWRHHYNNQQEELLREIRALRSEVQELKNK" misc_feature <830804..830941 /locus_tag="B565_0753" /note="Ion channel; Region: Ion_trans_2; cl11596" /db_xref="CDD:196264" gene 831238..831843 /locus_tag="B565_0754" /db_xref="GeneID:10486671" CDS 831238..831843 /locus_tag="B565_0754" /codon_start=1 /transl_table=11 /product="Arylsulfatase" /protein_id="YP_004391406.1" /db_xref="GI:330828454" /db_xref="GeneID:10486671" /translation="MRALLGILICLCAQQALADTRYVSDNIFTYIHNGPGTQYRILGS VKAGEPLEVKAVNSEAGFTQVVDGRGREGWIKNSELQSQISLRERLPQVEKERDELKD RLQNLNGDNEKRFTEKDGQIAAQSKEIAALKAQLVSQGEEMSNLKEQNDALTQSYDNQ EHDMQMDWFIRGGAMVGAGILLGILLPMLPRRRSRGDRWMN" misc_feature 831244..831840 /locus_tag="B565_0754" /note="SH3 domain-containing protein; Provisional; Region: PRK10884" /db_xref="CDD:182809" misc_feature 831289..831480 /locus_tag="B565_0754" /note="Bacterial SH3 domain; Region: SH3_3; cl02551" /db_xref="CDD:141512" gene 832158..835322 /locus_tag="B565_0755" /db_xref="GeneID:10486672" CDS 832158..835322 /locus_tag="B565_0755" /codon_start=1 /transl_table=11 /product="Delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase" /protein_id="YP_004391407.1" /db_xref="GI:330828455" /db_xref="GeneID:10486672" /translation="MFKATQVLAADYIPSDLAALREAITQNYVVDENAYLAELSAMLP GDGASLEQVTQRARTLVTKVRKESGSGDGIDAFLQEYSLDTQEGIILMCLAEALLRIP DAETADALIKDKLSGANWSSHFRKSDSTLVNASTWGLMLTGKIIKLDKKLDGNPANLL GRMVNKLGEPVVRSAMYAAMKIMGKQFVLGRDMKEALKASRKSRELGYTHTYDMLGES ALTMQDADKYLTDYRNAIEAVGNERISDGGPAPSISIKLSALHPRYDVANRERVLGEM CERLVGLVRLARDKDVAISIDAEEMDRLELSLDLFEQLYRSDANRGWGKLGMVVQAYS KRALPVLCWLTALAREQGDLIPVRLVKGAYWDSELKYAQQAGLPGYPLFTRKAGTDIS YLACARYLLSEPTRGFIAPQFATHNANTVVSILEMVGDRQFEFQRLHGMGEELHNAVL NDNPGLHCRIYAPVGAHKDLLPYLVRRLLENGANTSFVHKLVDPNTPVDSLAEHPLRT LKRYSGFANDRIPQPVNLFTDRKNSSGVNMNILSIQRPFFARLKELESKQWLAGPIVD GETLKRSEARTVLSPQDVSLTVGKIHWADEQAVEQALASAHAAFPRWRETPVSERAAA LEKLADLLEANREQFVSLCTREAGKLLQDGIDEVREAVDFCRYYAVQARSLMGQATLL PGYTGEQNELFLQGRGVFVCISPWNFPLAIFLGQIAAALATGNTVIAKPAEQTGLIAH LAVTLAHQAGIPGDVLQLLPGDGATVGAKLTADPRIGGVCFTGSTEIAKLINMTLAQR DGAILPLIAETGGQNAMIVDSTALPEQVVRDVVSAAFQSAGQRCSALRVLYLQEEIAE RVLEILTGAMQELKVGNPAEHNTDVGPVIDADAKAGLDAHLARMIPRARLIAQAPMPA ATMEGHFVQPTALEIGSIRELAKEQFGPILHVVRYATRDLDKVISDINGTGYGLTLGI HSRNESHAEELASRINVGNVYINRNQIGAMVGVQPFGGQGLSGTGPKAGGPHYLGRFV TEKTRTINTTAVGGNASLLAMGDA" misc_feature 832179..835307 /locus_tag="B565_0755" /note="bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed; Region: PRK11904" /db_xref="CDD:183371" misc_feature 832635..833639 /locus_tag="B565_0755" /note="Proline dehydrogenase; Region: Pro_dh; cl03282" /db_xref="CDD:186561" misc_feature 833604..835304 /locus_tag="B565_0755" /note="Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA; Region: ALDH_PutA-P5CDH; cd07125" /db_xref="CDD:143443" misc_feature order(834135..834137,834276..834281,834579..834581, 834675..834686,835134..835136,835179..835181) /locus_tag="B565_0755" /note="Glutamate binding site [chemical binding]; other site" /db_xref="CDD:143443" misc_feature order(834264..834269,834345..834347,834351..834356, 834444..834446,834498..834500,834507..834509, 834516..834518) /locus_tag="B565_0755" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:143443" misc_feature order(834276..834278,834579..834581,834672..834674, 834681..834683) /locus_tag="B565_0755" /note="catalytic residues [active]" /db_xref="CDD:143443" gene 835544..836323 /locus_tag="B565_0756" /db_xref="GeneID:10486673" CDS 835544..836323 /locus_tag="B565_0756" /codon_start=1 /transl_table=11 /product="NUDIX family hydrolase" /protein_id="YP_004391408.1" /db_xref="GI:330828456" /db_xref="GeneID:10486673" /translation="MSLTEQARWFVLGGDHLVLLDQQGEVPQGSKACLPTALADAHFE RFDEWQGLPCYLLDLGDEADTSAMSPLRQLMVAGDEEGFRLAGRAWQLATFRRTHRFC GECGAPMTPKAGEWAQVCHLGHTAYPRISPCIIVAVRKGPEILLAAHRRHYQADDPMY TVLAGFVEAGENLEQCVAREVFEESGIRVRNVRYVASQPWPFPHSLMMGFTADYESGE IRVQDDELVAADFFTADRLPRLPPHGTIARRLIERSLAGEG" misc_feature 835562..835828 /locus_tag="B565_0756" /note="NADH pyrophosphatase-like rudimentary NUDIX domain; Region: NUDIX-like; pfam09296" /db_xref="CDD:150083" misc_feature 835568..836311 /locus_tag="B565_0756" /note="NADH pyrophosphatase; Reviewed; Region: nudC; PRK00241" /db_xref="CDD:178944" misc_feature 835832..>835906 /locus_tag="B565_0756" /note="NADH pyrophosphatase zinc ribbon domain; Region: zf-NADH-PPase; pfam09297" /db_xref="CDD:150084" misc_feature 835937..836314 /locus_tag="B565_0756" /note="NADH pyrophosphatase, a member of the Nudix hydrolase superfamily, catalyzes the cleavage of NADH into reduced nicotinamide mononucleotide (NMNH) and AMP. Like other members of the Nudix family, it requires a divalent cation, such as Mg2+ or Mn2+, for...; Region: NADH_pyrophosphatase; cd03429" /db_xref="CDD:72887" misc_feature order(835940..835942,836033..836041,836141..836143, 836150..836152,836156..836158,836162..836164) /locus_tag="B565_0756" /note="putative NADH binding site [chemical binding]; other site" /db_xref="CDD:72887" misc_feature order(836036..836041,836045..836047,836081..836083, 836090..836095,836141..836143,836150..836152, 836156..836158,836162..836164) /locus_tag="B565_0756" /note="putative active site [active]" /db_xref="CDD:72887" misc_feature 836036..836104 /locus_tag="B565_0756" /note="nudix motif; other site" /db_xref="CDD:72887" misc_feature order(836081..836083,836090..836095,836216..836218) /locus_tag="B565_0756" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:72887" gene 836506..837573 /locus_tag="B565_0757" /db_xref="GeneID:10486674" CDS 836506..837573 /locus_tag="B565_0757" /codon_start=1 /transl_table=11 /product="Uroporphyrinogen decarboxylase" /protein_id="YP_004391409.1" /db_xref="GI:330828457" /db_xref="GeneID:10486674" /translation="MKELKNDRYLRALLRQDVDMTPVWMMRQAGRYLPEYKATRAQAG DFMSLCRNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEQGEGPRFERP ITSMADVQALPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS SKAFTKIKQMMYAEPQTLHLLLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRD YRDFSLQYMHKIVDGLIREHDGRRVPVTLFTKNGGQWLEQIAATGCDALGLDWTTDIA DAKRRVGDKVALQGNMDPSMLYATPARIREEVASILAGFGHGNGHVFNLGHGIHQDVN PEHAGVFVNAVHELSAQYHGR" misc_feature 836533..837546 /locus_tag="B565_0757" /note="Uroporphyrinogen decarboxylase (URO-D) is a dimeric cytosolic enzyme that decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, without requiring any prosthetic groups or cofactors. This...; Region: URO-D; cd00717" /db_xref="CDD:48141" misc_feature order(836581..836598,836611..836613,836623..836625, 836641..836643,836722..836742,836776..836778, 836791..836793,836935..836937,836965..836967, 836983..836985,837124..837126,837130..837135, 837247..837249,837484..837486) /locus_tag="B565_0757" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:48141" misc_feature order(836584..836586,836596..836598,836734..836736, 836965..836967,837130..837132,837484..837486) /locus_tag="B565_0757" /note="active site" /db_xref="CDD:48141" gene 837685..838614 /locus_tag="B565_0758" /db_xref="GeneID:10486675" CDS 837685..838614 /locus_tag="B565_0758" /codon_start=1 /transl_table=11 /product="ROK family protein" /protein_id="YP_004391410.1" /db_xref="GI:330828458" /db_xref="GeneID:10486675" /translation="MSSKSLDWGIDLGGTKCECVVLEGDEVLLRHRIPTERAGGYDHM IGQIAKLVAQCAEKIGQRPTVIGMGTPGARDPQTGLMKNCNTTELNGKPFKEDLERKL GVPVLIANDANCFALAETHLGAVRQHHPDAKVVFGIIMGTGVGSGIVINGQILNGHHG IAGEWGHNVLSPDGPECYCGKRGCVETLISGPALEAWYEAKAKRHLSLAQIAAATAHD HVAKLTIDRLHLLFGQALANVVNILDPDVIVIGGGVGNVQSLYSAGRQTILPFLFNPR FSAPIIAPALGDSAGVFGAALLARGEFKEALLS" misc_feature 837706..838578 /locus_tag="B565_0758" /note="FGGY family of carbohydrate kinases, N-terminal domain; Region: FGGY_N; cl09121" /db_xref="CDD:195797" misc_feature 837709..838578 /locus_tag="B565_0758" /note="fructokinase; Reviewed; Region: PRK09557" /db_xref="CDD:181951" gene 838675..839685 /locus_tag="B565_0759" /db_xref="GeneID:10486676" CDS 838675..839685 /locus_tag="B565_0759" /codon_start=1 /transl_table=11 /product="D-erythrose-4-phosphate dehydrogenase" /protein_id="YP_004391411.1" /db_xref="GI:330828459" /db_xref="GeneID:10486676" /translation="MIKIAINGYGRIGRNVLRALYESGRDKTIKIVAINELAAPEAMV HLTRYDTSHGRFHHPVQLAGNSMLVGEDLISLFAERDPSKLPWRALGVDVVLDCTGVF GSRADAELHLAAGAGKVLFSHPADADVDATVVYGVNHHTLTGAERIVSNASCTTNCVV PVIETLHREFEINCGTITTIHSAMHDQQVIDAYHSDLRRTRAASQSIIPVDTKLAKGL ERILPHFAGKFEAIAVRVPTINVTAMDLSITVRKKVTVTDVNQALQRASRGTLHGILD YTEEPLVSVDFNHDAHSCIIDGTQTRVSDANLVKMLMWCDNEWGFANRMLDTTRAMMA AG" misc_feature 838675..839682 /locus_tag="B565_0759" /note="erythrose 4-phosphate dehydrogenase; Provisional; Region: PRK13535" /db_xref="CDD:184122" misc_feature 838678..839136 /locus_tag="B565_0759" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 839152..839619 /locus_tag="B565_0759" /note="Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Region: Gp_dh_C; pfam02800" /db_xref="CDD:145777" gene 839747..840910 /locus_tag="B565_0760" /db_xref="GeneID:10486677" CDS 839747..840910 /locus_tag="B565_0760" /codon_start=1 /transl_table=11 /product="phosphoglycerate kinase" /protein_id="YP_004391412.1" /db_xref="GI:330828460" /db_xref="GeneID:10486677" /translation="MSVIKMTDLDLAGKRVLIRADLNVPVKDGKVTSDARIVATLPTI KLALEKGAKLMITSHLGRPTEGEYNEEFSLAPVVNYLKDALSCPVRLAKDYLDGVEVA AGELVVLENCRFNKGEKKNTEELAKKYAALCDVFVMDAFGTAHRAEGSTYGVAQFAPV ACAGPLLAGELEALGKAMLKPERPMVAIVGGSKVSTKLTVLESLSKIADQLVVGGGIA NTFIAAAGHNVGKSLCEHDLIDTAKKLAAETNIPVTTDVVVGAEFSESTPATIKSVSD VTDGDMIFDIGPDSAKALADIIMNAKTILWNGPVGVFEFDQFAEGTKVIAEAIAASPA FSIAGGGDTLAAIDKFGIADKVSYISTGGGAFLEFVEGKVLPAVAILEQRAKA" misc_feature 839762..840895 /locus_tag="B565_0760" /note="Phosphoglycerate kinase (PGK) is a monomeric enzyme which catalyzes the transfer of the high-energy phosphate group of 1,3-bisphosphoglycerate to ADP, forming ATP and 3-phosphoglycerate. This reaction represents the first of the two substrate-level...; Region: Phosphoglycerate_kinase; cl00198" /db_xref="CDD:185821" misc_feature order(839807..839809,839813..839815,839852..839854, 839921..839923,840083..840085) /locus_tag="B565_0760" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:29400" misc_feature order(840278..840289,840821..840829) /locus_tag="B565_0760" /note="hinge regions; other site" /db_xref="CDD:29400" misc_feature order(840392..840394,840593..840595,840665..840667, 840671..840673,840677..840688,840767..840775) /locus_tag="B565_0760" /note="ADP binding site [chemical binding]; other site" /db_xref="CDD:29400" misc_feature 840770..840772 /locus_tag="B565_0760" /note="catalytic site [active]" /db_xref="CDD:29400" gene 841026..842105 /locus_tag="B565_0761" /db_xref="GeneID:10486678" CDS 841026..842105 /locus_tag="B565_0761" /codon_start=1 /transl_table=11 /product="fructose-bisphosphate aldolase class II" /protein_id="YP_004391413.1" /db_xref="GI:330828461" /db_xref="GeneID:10486678" /translation="MSKKIFDFVKPGVITGDDVQKVFAIAKENGFALPAVNCVGTDSV NAVLEAAAKVKAPVIVQFSNGGAVFTAGKGLKLEGQKAAILGAISGAKHVHAVAEAYG VPVILHTDHAAKKLLPWIDGLLEAGEKHFAETGKPLFSSHMLDLSEESLEENIDICCE YLTRMAKMNMTLELELGCTGGEEDGVDNSHMDQSALYTQPEDVAYAYERLSKISPRFT IAASFGNVHGVYKPGNVKLTPSILDASQKFVSEKFGIPAKSLDFVFHGGSGSTLEEIR ESISYGVVKMNIDTDTQWATWEGLLNFYKKNEAYLQGQLGNPEGADKPNKKYYDPRVW LREGQTSMIARLEKAFSDLNAIDVL" misc_feature 841056..842102 /locus_tag="B565_0761" /note="fructose-bisphosphate aldolase; Provisional; Region: PRK09197" /db_xref="CDD:181692" misc_feature 841071..842102 /locus_tag="B565_0761" /note="Class II Type A, Fructose-1,6-bisphosphate (FBP) aldolases. The enzyme catalyses the zinc-dependent, reversible aldol condensation of dihydroxyacetone phosphate with glyceraldehyde-3-phosphate to form fructose-1,6-bisphosphate. FBP aldolase is...; Region: FBP_aldolase_IIA; cd00946" /db_xref="CDD:29572" misc_feature order(841134..841136,841353..841358,841458..841460, 841548..841550,841554..841556,841563..841574, 841701..841709,841713..841715,841818..841823, 841827..841829,841884..841886,841890..841895) /locus_tag="B565_0761" /note="active site" /db_xref="CDD:29572" misc_feature order(841143..841151,841158..841160,841221..841223, 841230..841238,841290..841292,841302..841304, 841311..841316,841572..841574,841893..841898, 841902..841907,841914..841916,841926..841928, 841935..841937) /locus_tag="B565_0761" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:29572" misc_feature order(841356..841358,841458..841460,841548..841550, 841569..841571,841704..841706,841818..841820) /locus_tag="B565_0761" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:29572" misc_feature order(841701..841703,841707..841709,841713..841715, 841821..841823,841827..841829) /locus_tag="B565_0761" /note="Na+ binding site [ion binding]; other site" /db_xref="CDD:29572" gene 842265..843569 /locus_tag="B565_0762" /db_xref="GeneID:10486679" CDS 842265..843569 /locus_tag="B565_0762" /codon_start=1 /transl_table=11 /product="D-amino acid oxidase family protein" /protein_id="YP_004391414.1" /db_xref="GI:330828462" /db_xref="GeneID:10486679" /translation="MQAGKHNGYQEHVASYYAATRNDSQQWPELEGEHKADVCIIGGG FTGLNTAINLADAGYKVALLEANRIGWGASGRNGGQLIRGIGHDTSQFVRWIGEEGVR ELDLMGLEAVQLVRERVERFNIDCDLTWGYCDLATRQRHLAGFEEDLDHLASLGYEHE LKLVPREDIHSVVGSDRYIGGLIDMGSGHLHPLNLALGEARAAASLGVSLFEHSRVTH IDYGKQVEVTTAHGRVTADYLVIGCNAYLNDLNPELGGRVLPAGSYILATEVLDRRLR QRLLPQNMAVCDQNVALDYYRLSADGRLLFGGACNYSGRDPKDIKAFMLPKMQRVFPE LAGTAIEFQWGGMIGIGANRLPQIGRLKEHPNVFYAQAYSGHGLNATHMAGKLVAEAI RGESRGFDLFASVPHITFPGGPALRSPLLALGMLWHRMKDIF" misc_feature 842316..843449 /locus_tag="B565_0762" /note="Malate:quinone oxidoreductase (Mqo); Region: Mqo; cl14881" /db_xref="CDD:196842" misc_feature 842358..843503 /locus_tag="B565_0762" /note="Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:31009" gene 843806..844396 /locus_tag="B565_0763" /db_xref="GeneID:10486680" CDS 843806..844396 /locus_tag="B565_0763" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391415.1" /db_xref="GI:330828463" /db_xref="GeneID:10486680" /translation="MEINVVASGGLSPLAQQQGSPAVQAQERAVTSPSTGGDSRMVRD LGAVLDELGLSPQGESRGGGTVSIRDSLEAFINTMMGSLQQQQEQQLALQQQQRQEQE QRKLAIADSSENPLKRDLERLLETLDQQGRQEKESEQGAEREAVNPLQSQLTKLLESS GAAESGVTLKEVLSGLASKLPNEPAERKGYRVDTQV" gene complement(844452..844865) /locus_tag="B565_0764" /db_xref="GeneID:10486681" CDS complement(844452..844865) /locus_tag="B565_0764" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391416.1" /db_xref="GI:330828464" /db_xref="GeneID:10486681" /translation="MKKWFIPLLALWLYGCSAGPGEEDIRQQVTAKLLAEIDANLFDI SDFTILGKEERMEGVYLVKVSYQLHFKQGLDQLQVLHDEDLVYDRVGPFQQEMGLMEL ERKYGEFEAGQVLPQEAEVWMMKDEQGWRLAEPAQ" gene complement(844936..845427) /locus_tag="B565_0765" /db_xref="GeneID:10486682" CDS complement(844936..845427) /locus_tag="B565_0765" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004391417.1" /db_xref="GI:330828465" /db_xref="GeneID:10486682" /translation="MHTELRRLQTSDAPALQRLFEQAPSYQAAVSNAPLSAQAGEEEL VACPPGLPLSDKHLIGRWEQGELTAVIDLLRGYPNPDTAYLGLLLVGEPWQGSGRGQS LYLHACTLASSWGATRLRLSVIASNESALSFWLRRGFTECYRRELAGYRAEAIVLERS LEP" misc_feature complement(845008..845244) /locus_tag="B565_0765" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(845417..847216) /locus_tag="B565_0766" /db_xref="GeneID:10486683" CDS complement(845417..847216) /locus_tag="B565_0766" /codon_start=1 /transl_table=11 /product="disulfide interchange protein DsbD" /protein_id="YP_004391418.1" /db_xref="GI:330828466" /db_xref="GeneID:10486683" /translation="MTFTRLLSPLLLLCALLMTAVGSSPAHASGADLLSSLGIEANAK PKFLQVDEAFQIESEQRGDQLLLTLHIADDYYLYRHSLRFKGNNLTFSEPTLPEGTEH EDDFFGKTRVYYQQVSIVVPLKEVGENATLRVRYQGCTDGLCYPPTDKLIDVAPLVTT TTASTADTAQSVAPVSQQDQLAAALGNQGFWLSIVAFFALGLGLAFTPCVFPMYPILT GIIAGAGHRLSTGRAFLLSFVYVQGMAVTYTLLGLVVASAGLKFQAALQHPYVLIALS VMFVLLALSMFGLYTLQLPSSLQTRLSGLSNRQQGGSVVGVAIMGMISGLVCSPCTTA PLSGALIYVAQSGDLWLGGAALYALSLGMGLPLLLLGTSGGKLLPKAGAWMDVVKQLF GFALLAVPILLLSRLWSDQIATLAWLGWGLLLCGYLYHHNQHQPHSVAKSVRGFVLLL AMISAVVVGKDLLQPAPPAAVTADASQTAPRFIRVKTLDDLKVQLAAARGKPVLLDLY ADWCVACKEFEHKTFSDPTVRERFGQMVLLQADVTANDDADIELLNGLNVLGLPTLIF FDREGKELTGQRVTGFMGPIPFAKHLEMVSDAH" misc_feature complement(845438..847147) /locus_tag="B565_0766" /note="thiol:disulfide interchange protein precursor; Provisional; Region: dipZ; PRK00293" /db_xref="CDD:178965" misc_feature complement(846749..847096) /locus_tag="B565_0766" /note="Disulphide bond corrector protein DsbC; Region: DsbC; pfam11412" /db_xref="CDD:192754" misc_feature complement(<846179..846628) /locus_tag="B565_0766" /note="Cytochrome C biogenesis protein transmembrane region; Region: DsbD; cl00515" /db_xref="CDD:153822" misc_feature complement(845438..845743) /locus_tag="B565_0766" /note="DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD...; Region: DsbDgamma; cd02953" /db_xref="CDD:48502" misc_feature complement(order(845444..845446,845471..845479, 845486..845491,845495..845497,845531..845539, 845654..845659,845669..845671,845675..845677, 845681..845689)) /locus_tag="B565_0766" /note="DsbD alpha interface [polypeptide binding]; other site" /db_xref="CDD:48502" misc_feature complement(order(845672..845674,845681..845683)) /locus_tag="B565_0766" /note="catalytic residues [active]" /db_xref="CDD:48502" gene complement(847213..847545) /locus_tag="B565_0767" /db_xref="GeneID:10486684" CDS complement(847213..847545) /locus_tag="B565_0767" /codon_start=1 /transl_table=11 /product="Divalent-cation tolerance protein CutA" /protein_id="YP_004391419.1" /db_xref="GI:330828467" /db_xref="GeneID:10486684" /translation="MKIRFMTDAIVVLCTCPDQTSADLLCKQLLNQRLAACINQLPGI TSVYRWQGKVERATEIQLIIKSRQSRFAELQACIQANHPYEVPELLALPVSAGLPAYL DWINGETS" misc_feature complement(847219..847527) /locus_tag="B565_0767" /note="CutA1 divalent ion tolerance protein; Region: CutA1; cl00584" /db_xref="CDD:186092" gene 847775..848131 /locus_tag="B565_0768" /db_xref="GeneID:10486685" CDS 847775..848131 /locus_tag="B565_0768" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391420.1" /db_xref="GI:330828468" /db_xref="GeneID:10486685" /translation="MTQQNEQQRNRMLSLLREGERRMLVQLAGLLRTTADEINAELEK EELMATLEQPITVEYLNGVVQHHLFERKHKGDMAVAQQILSDYQSELEALQTAQAQPE EAVATDESGEELKAQA" gene complement(848294..848740) /locus_tag="B565_0769" /db_xref="GeneID:10486686" CDS complement(848294..848740) /locus_tag="B565_0769" /codon_start=1 /transl_table=11 /product="transmembrane pair domain-containing protein" /protein_id="YP_004391421.1" /db_xref="GI:330828469" /db_xref="GeneID:10486686" /translation="MRTRNDRLRHAIGFEFIGLLIAAPLASWVTGVGLNHMGPLALFF SVLATVWNYIYNIGVDKLLLKYQGHTHKTLWQRVLHTFGFEGGLLIVALPVMSWWLSV SMLEALVLDLGFVVFYLIYAFVYNWGYDKVFPIPREVPHGMPQEAR" misc_feature complement(848534..848737) /locus_tag="B565_0769" /note="Bacterial Transmembrane Pair family; Region: BTP; pfam05232" /db_xref="CDD:191238" misc_feature complement(848330..848527) /locus_tag="B565_0769" /note="Bacterial Transmembrane Pair family; Region: BTP; pfam05232" /db_xref="CDD:191238" gene 848866..849747 /locus_tag="B565_0770" /db_xref="GeneID:10486687" CDS 848866..849747 /locus_tag="B565_0770" /codon_start=1 /transl_table=11 /product="Regulatory protein" /protein_id="YP_004391422.1" /db_xref="GI:330828470" /db_xref="GeneID:10486687" /translation="MTPSLEQLRILLAAAETGSFSAAARKLGKAQSVVSSAIANLEID LALTLFDRSGRYPQLTEAGARMVQEAGILLAQSERLQSIAGELAAGVETRLTLAIDDD SHLPWLGTLLEEFATRYPTVELELLFPLMEDVTEMLVTGRAQLGISYQKVHPQREIVA HSLGEVTMPLVVSPDHPLARKQPLREVDLQGARQLMVTGRREGSERQRFRISAQVWWV EGDLGVLELVKRGLGWSAIPEFLLHQPLKRGEVVVLEPDFIASHALALELQWHRARPL GQAGRWLKEALLARVPR" misc_feature 848872..849744 /locus_tag="B565_0770" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature 848878..849054 /locus_tag="B565_0770" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 849145..849726 /locus_tag="B565_0770" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cd05466" /db_xref="CDD:176102" misc_feature order(849190..849195,849199..849204,849211..849213, 849223..849225,849229..849249,849499..849507, 849517..849525,849541..849546,849550..849555) /locus_tag="B565_0770" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene complement(849754..850662) /locus_tag="B565_0771" /db_xref="GeneID:10486688" CDS complement(849754..850662) /locus_tag="B565_0771" /codon_start=1 /transl_table=11 /product="aminomethyltransferase" /protein_id="YP_004391423.1" /db_xref="GI:330828471" /db_xref="GeneID:10486688" /translation="MSLQPPVFPAEPTRFSLTKLAITRISGQDRVKYLQGQVTCDVNA LQPGQQTAGGHCDPKGKLWSNFRLLCLDDSLLLLTSPSVLERQLPELKKFAVFSKVEI AADERHATGIAGTGSDAWIAAQFGLLQSGLIDGGMAVKIEQDRWLLVSNQQADALPQG DESLWWGLEIKAGLPHMEAVHQGEFIPQMLNLQALDGISFNKGCYMGQETVARAKYRG ANNRALFLLAGTTGEPVASGDTLELQLGDNWRRSGMVLNAWQQAGQVWLTAVLPKDTE ADAQFRLKQDEGSRLTLQPLPYALTE" misc_feature complement(849757..850650) /locus_tag="B565_0771" /note="putative global regulator; Reviewed; Region: PRK09559" /db_xref="CDD:181953" misc_feature complement(849976..850161) /locus_tag="B565_0771" /note="folate-binding protein YgfZ; Region: ygfZ_signature; TIGR03317" /db_xref="CDD:163214" gene 850774..851043 /locus_tag="B565_0772" /db_xref="GeneID:10486689" CDS 850774..851043 /locus_tag="B565_0772" /codon_start=1 /transl_table=11 /product="TPR repeat-containing protein" /protein_id="YP_004391424.1" /db_xref="GI:330828472" /db_xref="GeneID:10486689" /translation="MLSPVEKSRLKWACRRGMLELDVIFMPFFEHEFDSLSEADQQTF IRLLASDDPDLFKWCMGHGVPADPAFAAMIPMILERNQARHDRQG" misc_feature 850774..851028 /locus_tag="B565_0772" /note="Flavinator of succinate dehydrogenase; Region: Sdh5; cl01110" /db_xref="CDD:186339" gene 851048..851455 /locus_tag="B565_0773" /db_xref="GeneID:10486690" CDS 851048..851455 /locus_tag="B565_0773" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391425.1" /db_xref="GI:330828473" /db_xref="GeneID:10486690" /translation="MERVIMTVHPSRHQQYLLVALFLLLLWPVAGLIAGWQWALLLPV WLVVLWLSWRALAEPPFELVWDGQWLQWQGRRYQLDKKSRILPGVLRLALCPDPQESG AVLPRQLWLFSDALPPEHYRLLARAIHFLPSRR" gene complement(851610..852974) /locus_tag="B565_0774" /db_xref="GeneID:10486691" CDS complement(851610..852974) /locus_tag="B565_0774" /codon_start=1 /transl_table=11 /product="L-aspartate oxidase" /protein_id="YP_004391426.1" /db_xref="GI:330828474" /db_xref="GeneID:10486691" /translation="MVEFTARHARESIQWLIQQGVPFDQEENADGESQYHLTREGGHS HRRIFHAADATGKAVQLTLIDQVRAHPNIQLMERFNAVDLITTRKLNLPGNKVLGAYV WNRNAEQVEVIRARFVALATGGASKVYQYTSNPDVSSGDGIAMAWRAGCRVANLEFNQ FHPTSLFHPDDPNFLLTEALRGEGAYLRRPDGSRFMPEFDERAELAPRDIVARAIDHE MKRLGADCMYLDISHKPADFIIKHFPTIYERCLAVGIDITKEPMPIVPAAHYTCGGVM IDNNGQTDIPGLYAIGEVTYTGLHGANRMASNSLLECVVYAHQAGADILAKLPMSVEP PRLPVWDESKVEDSDELVVIQHNWHELRLMMWDYVGIVRTNKRLARAKRRIDLLKQEV QEYYANFRVSNNLLELRNLLQVAELIVNCALQRKESRGLHYNLDYPDMLPDSKPTVLT PERD" misc_feature complement(852003..852971) /locus_tag="B565_0774" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(<851658..851903) /locus_tag="B565_0774" /note="domain; Region: Succ_DH_flav_C; pfam02910" /db_xref="CDD:190472" gene 853020..853349 /locus_tag="B565_0775" /db_xref="GeneID:10486692" CDS 853020..853349 /locus_tag="B565_0775" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391427.1" /db_xref="GI:330828475" /db_xref="GeneID:10486692" /translation="MGFDAVSFVENGSDASLRIESGPFTDGPLAQNQDFGVVCQSQRE GQTSGTAANDQYIAKVFNTCFHKYHWPGLRTGTMVAQARARMQPASHFFQLKRTFSDS PCLNLCA" gene 853400..853981 /locus_tag="B565_0776" /db_xref="GeneID:10486693" CDS 853400..853981 /locus_tag="B565_0776" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="YP_004391428.1" /db_xref="GI:330828476" /db_xref="GeneID:10486693" /translation="MSDQNLLDEQLVERVQRGDKAAFNLLVKKYQHKVVNLVARYVNN PGDVPDVAQEAFIKAYRALPTFRGESAFYTWLYRIAVNTAKNYLTSQGRRPPSSDVEA DEAESYGGGEALQEVSTPENLALTDEIKRTVFSAIEALPEDLRTAITLRELEGLSYEE IAEIMDCPVGTVRSRIFRAREAIDKKLQPLIEN" misc_feature 853421..853978 /locus_tag="B565_0776" /note="RNA polymerase sigma factor AlgU; Provisional; Region: algU; PRK11923" /db_xref="CDD:171347" misc_feature 853475..853681 /locus_tag="B565_0776" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature 853787..853948 /locus_tag="B565_0776" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cd06171" /db_xref="CDD:100119" misc_feature order(853820..853822,853850..853852,853868..853873, 853901..853903,853907..853912,853916..853924, 853928..853933,853937..853939) /locus_tag="B565_0776" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:100119" gene 854004..854606 /locus_tag="B565_0777" /db_xref="GeneID:10486694" CDS 854004..854606 /locus_tag="B565_0777" /codon_start=1 /transl_table=11 /product="sigma-E factor regulatory protein RseA" /protein_id="YP_004391429.1" /db_xref="GI:330828477" /db_xref="GeneID:10486694" /translation="MANKEQISALMDGDLSDAEVLNELEMDSDLQDTWGRYHLIGDAM RGDLPVNLQLDLSDSIMAALEDEPTILAPKPVETAPVLQPAVAPVKTDSNVVPLFRRV GQQLGQYAIAASVAAAVIFGVQQYQGQDGVPANPVLNTIPIGGSAAPVSVHYPQQDGA RARQQGLTEQQMQEQRERINAFLRDHQLQQRLLQDRQIQQ" misc_feature 854013..854240 /locus_tag="B565_0777" /note="Anti sigma-E protein RseA, N-terminal domain; Region: RseA_N; pfam03872" /db_xref="CDD:146482" misc_feature 854400..>854549 /locus_tag="B565_0777" /note="Anti sigma-E protein RseA, C-terminal domain; Region: RseA_C; pfam03873" /db_xref="CDD:146483" gene 854628..855608 /locus_tag="B565_0778" /db_xref="GeneID:10486695" CDS 854628..855608 /locus_tag="B565_0778" /codon_start=1 /transl_table=11 /product="sigma-E factor regulatory protein RseB" /protein_id="YP_004391430.1" /db_xref="GI:330828478" /db_xref="GeneID:10486695" /translation="MRQSSRILLASLLLISAKASADDKSAEALLQQMQSAVQQQNFEL SMVKARQGRLEPIRISHAVINGKEVAHLSYLDGKAIEYLQRQNEYTFFENSHDPYTLK DARFPGIWSTLVKMPLAQVLESYDPVLAGRSRVAGVVAQVVRLVPKEADKYGFVLWID EQSHLLLRIDMVEREGNLVEQVLGVELDLQSKPAPWLVKLANSKQPPALALEDAYPAP QQQLNWQITWLPDGFKVLSQDRHQLVTTSMPVDYMMLSDGLVDLSVYVSRVDPKQAVR QQLIRQGATSLVSYVNEVGVEITVVGEVPAETAKRIAESVQPLARNEAVQ" misc_feature 854706..855578 /locus_tag="B565_0778" /note="Outer membrane lipoprotein carrier protein LolA; Region: LolA; cl01065" /db_xref="CDD:194024" gene 855693..856163 /locus_tag="B565_0779" /db_xref="GeneID:10486696" CDS 855693..856163 /locus_tag="B565_0779" /codon_start=1 /transl_table=11 /product="sigma-E factor regulatory protein RseC" /protein_id="YP_004391431.1" /db_xref="GI:330828479" /db_xref="GeneID:10486696" /translation="MNEMSEELATVVAIEGDHAWVECERRSACSGCQQQSNCGTGTVA KAFPLKAPRLRVRLTAEVRVGQQVRLGIPQESLLRGAALVYVLPLFCLLAGALLGQLW LTPLLSGGEGITILCCLLGGVLGFLLVRYFSNRLDQGRYGPQMLGVVVPVRILP" misc_feature 855723..>855950 /locus_tag="B565_0779" /note="Positive regulator of sigma(E), RseC/MucC; Region: RseC_MucC; cl01178" /db_xref="CDD:186372" gene 856280..858073 /locus_tag="B565_0780" /db_xref="GeneID:10486697" CDS 856280..858073 /locus_tag="B565_0780" /codon_start=1 /transl_table=11 /product="membrane GTPase LepA" /protein_id="YP_004391432.1" /db_xref="GI:330828480" /db_xref="GeneID:10486697" /translation="MKHIRNFSIIAHIDHGKSTLSDRLIQTCGGLSDREMQAQVLDSM DLERERGITIKAQSVTLNYQAQDGNTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAAEPERVAEEIEDIVGIDAVDAVR CSAKTGLGVDLVLEEIVAKIPAPEGDPDAPLQALIIDSWFDSYLGVVSLVRIKNGSLK KNDKIKVMSTGQVWGVDRIGIFTPKQVDTQGLGCGEVGWVVCGIKDIHGAPVGDTLTQ AKNGADKALAGFKKVKPQVYAGLFPISSDDYESFRDALDKLSLNDASLFFEPESSTAL GFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEIELTDGSTIHIDSPAQMPA ITSIKEMREPIAECHILLPQEYMGNVITLCIEKRGVQTNMVYHGKQVALTYEIPMAEV VLDFFDRLKSTSRGYASLDYGFKRFETSDMVRLDIMINGERVDALAIITHKDNAQYRG RQVVEKMRELIPRQMFDIAIQAAIGNQIIARSTVKALRKDVTAKCYGGDVSRKKKLLN KQKEGKKRMKSLGRVDVPQEAFLAILHVGKD" misc_feature 856280..858070 /locus_tag="B565_0780" /note="GTP-binding protein LepA; Provisional; Region: PRK05433" /db_xref="CDD:180078" misc_feature 856292..856828 /locus_tag="B565_0780" /note="LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and...; Region: LepA; cd01890" /db_xref="CDD:133290" misc_feature 856310..856333 /locus_tag="B565_0780" /note="G1 box; other site" /db_xref="CDD:133290" misc_feature order(856313..856315,856319..856321,856331..856336, 856343..856345,856352..856357,856448..856453, 856520..856525,856592..856597,856703..856705, 856715..856717) /locus_tag="B565_0780" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:133290" misc_feature order(856319..856336,856670..856675,856679..856681, 856763..856771) /locus_tag="B565_0780" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133290" misc_feature 856415..856450 /locus_tag="B565_0780" /note="Switch I region; other site" /db_xref="CDD:133290" misc_feature 856436..856438 /locus_tag="B565_0780" /note="G2 box; other site" /db_xref="CDD:133290" misc_feature 856508..856519 /locus_tag="B565_0780" /note="G3 box; other site" /db_xref="CDD:133290" misc_feature 856514..856570 /locus_tag="B565_0780" /note="Switch II region; other site" /db_xref="CDD:133290" misc_feature 856670..856681 /locus_tag="B565_0780" /note="G4 box; other site" /db_xref="CDD:133290" misc_feature 856763..856771 /locus_tag="B565_0780" /note="G5 box; other site" /db_xref="CDD:133290" misc_feature 856850..857107 /locus_tag="B565_0780" /note="lepA_II: This subfamily represents the domain II of LepA, a GTP-binding protein localized in the cytoplasmic membrane. The N-terminal domain of LepA shares regions of homology to translation factors. In terms of interaction with the ribosome, EF-G, EF-...; Region: lepA_II; cd03699" /db_xref="CDD:58090" misc_feature 857480..857716 /locus_tag="B565_0780" /note="lepA_C: This family represents the C-terminal region of LepA, a GTP-binding protein localized in the cytoplasmic membrane. LepA is ubiquitous in Bacteria and Eukaryota (e.g. Saccharomyces cerevisiae GUF1p), but is missing from Archaea. LepA exhibits...; Region: lepA_C; cd03709" /db_xref="CDD:58062" misc_feature 857738..858061 /locus_tag="B565_0780" /note="GTP-binding protein LepA C-terminus; Region: LepA_C; pfam06421" /db_xref="CDD:191515" gene 858077..859000 /locus_tag="B565_0781" /db_xref="GeneID:10486698" CDS 858077..859000 /locus_tag="B565_0781" /codon_start=1 /transl_table=11 /product="signal peptidase I" /protein_id="YP_004391433.1" /db_xref="GI:330828481" /db_xref="GeneID:10486698" /translation="MASTFSLILVVVCAITGVIWCLDKMIWSKQRAAKIAVARAHGGA HLDEKTLAKVAPVPVWIEQTAGVFPVITFVLILRSFIFEPFQIPSGSMMPTLLVGDFI LVEKFAYGLRDPVTNTKFLETGEPKRGDVVVFKYPLEPRVDYIKRVVGMPGDRVIYRN KELMIRPKCEEQEGKTCPGFKKLDVKFEQRGEFTQMGIPLDRYTEQLGDVSHETLRNP LMPDMVGRYYRQPGTYPDEWVVPEGQYFVMGDNRDNSTDSRFWGFVPEQNLVGKAVAI WISFEFEREEGSLLPSWVPTGVRFNRIGGIK" misc_feature 858077..858997 /locus_tag="B565_0781" /note="signal peptidase I; Provisional; Region: PRK10861" /db_xref="CDD:182787" misc_feature 858323..>858526 /locus_tag="B565_0781" /note="The S26 Type I signal peptidase (SPase; LepB; leader peptidase B; leader peptidase I; EC 3.4.21.89) family members are essential membrane-bound serine proteases that function to cleave the amino-terminal signal peptide extension from proteins that are...; Region: S26_SPase_I; cd06530" /db_xref="CDD:119398" misc_feature order(858347..858349,858512..858514) /locus_tag="B565_0781" /note="Catalytic site [active]" /db_xref="CDD:119398" misc_feature <858809..858895 /locus_tag="B565_0781" /note="The S26 Type I signal peptidase (SPase; LepB; leader peptidase B; leader peptidase I; EC 3.4.21.89) family members are essential membrane-bound serine proteases that function to cleave the amino-terminal signal peptide extension from proteins that are...; Region: S26_SPase_I; cd06530" /db_xref="CDD:119398" gene 859001..859672 /locus_tag="B565_0782" /db_xref="GeneID:10486699" CDS 859001..859672 /locus_tag="B565_0782" /codon_start=1 /transl_table=11 /product="ribonuclease III" /protein_id="YP_004391434.1" /db_xref="GI:330828482" /db_xref="GeneID:10486699" /translation="MNIKMNRLQSRLGHVFADLELLTRALTHRSAGSRHNERLEFLGD SILSLVIADDLFHRFPQAAEGDLSRMRATLVREKTLAELGREFDLGDHLILGPGELKS GGFRRESILADTVEAVIGAVYLDTNLETVRTLLLSWYASRLEEIKPGIEQKDPKTRLQ EILQGSRKSLPTYTVTNVKGEAHNQEFTVQCDVEGLDGPLVGVGTSRRKAEQAAAQQA LEKLS" misc_feature 859001..859624 /locus_tag="B565_0782" /note="ribonuclease III; Reviewed; Region: rnc; PRK00102" /db_xref="CDD:178863" misc_feature 859058..859438 /locus_tag="B565_0782" /note="RIBOc. Ribonuclease III C terminal domain. This group consists of eukaryotic, bacterial and archeal ribonuclease III (RNAse III) proteins. RNAse III is a double stranded RNA-specific endonuclease. Prokaryotic RNAse III is important in post-...; Region: RIBOc; cd00593" /db_xref="CDD:29697" misc_feature order(859109..859114,859121..859126,859133..859135, 859142..859147,859154..859159,859163..859171, 859199..859201,859367..859369,859394..859396) /locus_tag="B565_0782" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29697" misc_feature order(859109..859111,859118..859120,859130..859132, 859337..859339,859346..859348) /locus_tag="B565_0782" /note="active site" /db_xref="CDD:29697" misc_feature order(859118..859120,859337..859339,859346..859348) /locus_tag="B565_0782" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:29697" misc_feature 859460..>859624 /locus_tag="B565_0782" /note="Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase...; Region: DSRM; cd00048" /db_xref="CDD:28930" misc_feature order(859460..859462,859478..859483,859613..859624) /locus_tag="B565_0782" /note="dsRNA binding site [nucleotide binding]; other site" /db_xref="CDD:28930" gene 859734..860633 /locus_tag="B565_0783" /db_xref="GeneID:10486700" CDS 859734..860633 /locus_tag="B565_0783" /codon_start=1 /transl_table=11 /product="GTP-binding protein era" /protein_id="YP_004391435.1" /db_xref="GI:330828483" /db_xref="GeneID:10486700" /translation="MTDTTYCGFVAIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRH RILGIDTEDNYQTIYVDTPGLHIEEKRAINRLMNRAATSSLGDVAMVVFMVDGTHWTK DDEMVLGKLRNLKCPVVLAVNKIDNVKEKEDLLPHLEWLGQQMNFAHILPISAEKGTN VEKIREWAKDLLPENVHFFPEDYVTDRSSRFMASEIIREKLMRFTGEELPYSVTVEIE RFKVEENGLYHIHGLILVERDGQKKMVIGNKGEKIKTIGTEARLDMERLFQNKVHLEL WVKVKSGWADDERALRSLGYGDD" misc_feature 859740..860621 /locus_tag="B565_0783" /note="GTPase Era; Reviewed; Region: era; PRK00089" /db_xref="CDD:178854" misc_feature 859746..860249 /locus_tag="B565_0783" /note="Era subfamily. Era (E. coli Ras-like protein) is a multifunctional GTPase found in all bacteria except some eubacteria. It binds to the 16S ribosomal RNA (rRNA) of the 30S subunit and appears to play a role in the assembly of the 30S subunit...; Region: Era; cd04163" /db_xref="CDD:133363" misc_feature 859773..859796 /locus_tag="B565_0783" /note="G1 box; other site" /db_xref="CDD:133363" misc_feature order(859779..859799,859839..859841,859851..859859, 859923..859925,860100..860105,860109..860111, 860193..860198) /locus_tag="B565_0783" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133363" misc_feature order(859818..859820,859824..859868) /locus_tag="B565_0783" /note="Switch I region; other site" /db_xref="CDD:133363" misc_feature 859857..859859 /locus_tag="B565_0783" /note="G2 box; other site" /db_xref="CDD:133363" misc_feature order(859911..859928,859989..859994) /locus_tag="B565_0783" /note="Switch II region; other site" /db_xref="CDD:133363" misc_feature 859914..859925 /locus_tag="B565_0783" /note="G3 box; other site" /db_xref="CDD:133363" misc_feature 860100..860111 /locus_tag="B565_0783" /note="G4 box; other site" /db_xref="CDD:133363" misc_feature 860193..860201 /locus_tag="B565_0783" /note="G5 box; other site" /db_xref="CDD:133363" misc_feature 860427..860621 /locus_tag="B565_0783" /note="K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains...; Region: KH-I; cl00098" /db_xref="CDD:193658" gene 860634..861344 /locus_tag="B565_0784" /db_xref="GeneID:10486701" CDS 860634..861344 /locus_tag="B565_0784" /codon_start=1 /transl_table=11 /product="DNA repair protein RecO" /protein_id="YP_004391436.1" /db_xref="GI:330828484" /db_xref="GeneID:10486701" /translation="MLTPAFVIHSRPYRETSQLVEVFTQDSGRFTLVARGSRGPRSPL KGLLQPFTLLTIAWRGKGDLKNLTQVECPDHSLRLGGDRLFYGLYLNELVYYLLEAHT PFPEVFDAYARAIMALADGETPELPLRRFEFLLLQALGYAVDFEYTADDESPIEPTLL YGFERELGFVACERAPDPRTLFLGAHLLAFAEGRFDTPPLLQAAKRFSRLALQPYLGK RQLKSRELFLKRKASMQG" misc_feature 860640..861314 /locus_tag="B565_0784" /note="DNA repair protein RecO; Reviewed; Region: recO; PRK00085" /db_xref="CDD:178852" misc_feature 860640..860849 /locus_tag="B565_0784" /note="Recombination protein O N terminal; Region: RecO_N; pfam11967" /db_xref="CDD:152402" misc_feature 860865..861308 /locus_tag="B565_0784" /note="Recombination protein O C terminal; Region: RecO_C; pfam02565" /db_xref="CDD:145610" gene 861429..862166 /locus_tag="B565_0785" /db_xref="GeneID:10486702" CDS 861429..862166 /locus_tag="B565_0785" /codon_start=1 /transl_table=11 /product="pyridoxine 5'-phosphate synthase" /protein_id="YP_004391437.1" /db_xref="GI:330828485" /db_xref="GeneID:10486702" /translation="MSEIYLGVNIDHIATLRNARGTQYPDPVQAAFVAEQAGADGITV HLREDRRHITDRDVEILRQTIQTRMNLEMAVTEEMIGIACRIKPHFVCLVPEKRTEVT TEGGLDVAGQLAKVTDAVARLSAVGAQVSLFIDADPIQIDAAAESGAPFIEIHTGRYA DATTDAERNAEFKRIAAGASYAAGKGLKVNAGHGLHYHNVKAIAAIPELYELNIGHAI IGRAAFDGLAKAVSDMRLLMQEARQGI" misc_feature 861444..862142 /locus_tag="B565_0785" /note="Pyridoxine 5'-phosphate (PNP) synthase domain; pyridoxal 5'-phosphate is the active form of vitamin B6 that acts as an essential, ubiquitous coenzyme in amino acid metabolism. In bacteria, formation of pyridoxine 5'-phosphate is a step in the...; Region: PNPsynthase; cd00003" /db_xref="CDD:58644" misc_feature order(861453..861455,861459..861464,861486..861488, 861561..861563,861567..861569,861579..861584, 861642..861644,861732..861737,861744..861746, 861825..861827,861885..861887,862005..862010, 862071..862076) /locus_tag="B565_0785" /note="active site" /db_xref="CDD:58644" misc_feature order(861453..861455,861555..861557,861630..861632, 861636..861638,861642..861644,861696..861698, 861702..861704,861819..861821,861825..861827, 861879..861881,861885..861887,861996..861998, 862005..862007,862056..862061,862065..862067) /locus_tag="B565_0785" /note="hydrophilic channel; other site" /db_xref="CDD:58644" misc_feature order(861486..861488,861906..861911) /locus_tag="B565_0785" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:58644" misc_feature order(861561..861563,861642..861644,861885..861887, 862005..862007) /locus_tag="B565_0785" /note="catalytic residues [active]" /db_xref="CDD:58644" misc_feature 861714..861746 /locus_tag="B565_0785" /note="active site lid [active]" /db_xref="CDD:58644" gene complement(862287..863141) /locus_tag="B565_0786" /db_xref="GeneID:10486703" CDS complement(862287..863141) /locus_tag="B565_0786" /codon_start=1 /transl_table=11 /product="Class II aldolase, tagatose bisphosphate family" /protein_id="YP_004391438.1" /db_xref="GI:330828486" /db_xref="GeneID:10486703" /translation="MYLISSHEMLKDAQRRGYAVPAFNIHNLETVQVVARTAARMRSP VILAGTPGTYRHAGVEYLVSICQAAAHEYRIPLVLHLDHHEDEQDIHNKVEAGIRSAM IDASHFPFEENIEKVRSVVTFCHRMGASVEAELGQLGGQEDDLIVDAAHAKFTDPLKA AEFVRRTGIDSLAVAIGTAHGLYKEEPRLDFARLATIREQVDIPLVLHGASGVPEADV RRCIELGICKVNVATELKIAFADAMKAFLGSHPDASDPRQYLVPAMAAMEEVVEAKIR MCMSDGKL" misc_feature complement(862296..863120) /locus_tag="B565_0786" /note="Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose...; Region: TBP_aldolase_IIB; cd00947" /db_xref="CDD:29573" misc_feature complement(order(862401..862403,862410..862412, 862422..862424,862431..862436,862440..862445, 862716..862718,862935..862940,862947..862949, 862959..862961,862971..862979,862986..862988, 863046..863048,863055..863063)) /locus_tag="B565_0786" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:29573" misc_feature complement(order(862443..862448,862452..862454, 862509..862511,862515..862520,862593..862595, 862599..862607,862893..862898)) /locus_tag="B565_0786" /note="active site" /db_xref="CDD:29573" misc_feature complement(order(862518..862520,862602..862604, 862893..862895)) /locus_tag="B565_0786" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:29573" misc_feature complement(order(862509..862511,862515..862517, 862593..862595,862599..862601,862605..862607)) /locus_tag="B565_0786" /note="Na+ binding site [ion binding]; other site" /db_xref="CDD:29573" gene complement(863132..864331) /locus_tag="B565_0787" /db_xref="GeneID:10486704" CDS complement(863132..864331) /locus_tag="B565_0787" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine-6-phosphate deacetylase" /protein_id="YP_004391439.1" /db_xref="GI:330828487" /db_xref="GeneID:10486704" /translation="MASRIRARRLLTEQGWLEHQELTHEGGIITAIAPITDGDPARDA ELLVPALIDGHVHGGAGVDVMDSEDNTLATLSMAKAAEGVGAFLATTVTAPLPEIEQA LARIADGVARGMPGAELLGCYLEGPYFTPDNKGAHDQALFRELDIAELTHLQQLARGS LKVVALAPEKPNAIAAIHHLAANGIRVMLGHSTADHDTTMAALAAGASGLVHCFNGMR GLHHREPGMVGAGLVHPAAWLELIADGHHLHPSVLKLCHCCAGQRLLLVTDAMRAAGM PDGHYLLGNYRVEMKNGVVRTDTGGLAGSTLTLLGAVRNMVQLADVPLDEAIAMASLA PAKMLGIADRLGSLAVGKQANLLALTTELNQQHIWVAGREINPTQLSSLFSGSRVNQD AQESLCI" misc_feature complement(863216..864319) /locus_tag="B565_0787" /note="N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to...; Region: NagA; cd00854" /db_xref="CDD:30034" misc_feature complement(order(863426..863428,863525..863527, 863591..863593,863684..863689,863696..863698, 863759..863761,863924..863926,863957..863959, 864161..864163,864167..864169)) /locus_tag="B565_0787" /note="active site" /db_xref="CDD:30034" misc_feature complement(order(863558..863560,863567..863572, 863576..863581,863585..863596,863633..863638, 863657..863659,863663..863668,863672..863674, 863690..863692)) /locus_tag="B565_0787" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:30034" gene complement(864331..864771) /locus_tag="B565_0788" /db_xref="GeneID:10486705" CDS complement(864331..864771) /locus_tag="B565_0788" /codon_start=1 /transl_table=11 /product="putative phosphotransferase system enzyme subunit" /protein_id="YP_004391440.1" /db_xref="GI:330828488" /db_xref="GeneID:10486705" /translation="MLGIIICGHGGFASGLERAMLQILGEQEAVIAIDFPESSTTALL QAQCEAALAEVDKGDGVVFLTDLLGGTPFRVASTLSLHQPEREVITGTNLQLLLEMAL ERDGLSAREFRRQALDCGHRGLTSLADEMSKERQTDAALVEEGI" misc_feature complement(864409..864768) /locus_tag="B565_0788" /note="PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_man; cd00006" /db_xref="CDD:28890" misc_feature complement(order(864466..864468,864559..864561, 864667..864669,864700..864705,864745..864747)) /locus_tag="B565_0788" /note="active pocket/dimerization site; other site" /db_xref="CDD:28890" misc_feature complement(order(864559..864561,864574..864576, 864745..864747)) /locus_tag="B565_0788" /note="active site" /db_xref="CDD:28890" misc_feature complement(864745..864747) /locus_tag="B565_0788" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:28890" gene complement(864820..865698) /locus_tag="B565_0789" /db_xref="GeneID:10486706" CDS complement(864820..865698) /locus_tag="B565_0789" /codon_start=1 /transl_table=11 /product="phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific" /protein_id="YP_004391441.1" /db_xref="GI:330828489" /db_xref="GeneID:10486706" /translation="MASNNTAARIISSAEPHNTRPQSDDTYEDQQLGAELTKQDINRF AWRSLLLQASFNYERMQASGWLYGLLPALQKIHTNPRDLSRAMKGHMGFFNTHPFLVT FVMGIVLAMERSKQNVNSIQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGADLALQGS IMGAVVFFLLFNVVHFGLRFGLAHYAYRMGVAAIPVIKANTRKVGHAASIVGMTVIGA LVATYVRLGTTLEITAGDAVVKLQADVLDKLMPAFLPLLYTLAMYALIRKGWSPLRLI VITVVLGIVGKFAGFL" misc_feature complement(864877..865596) /locus_tag="B565_0789" /note="PTS system mannose/fructose/sorbose family IID component; Region: EIID-AGA; cl01507" /db_xref="CDD:186441" gene complement(865688..866461) /locus_tag="B565_0790" /db_xref="GeneID:10486707" CDS complement(865688..866461) /locus_tag="B565_0790" /codon_start=1 /transl_table=11 /product="phosphotransferase system PTS sorbose-specific IIC subunit" /protein_id="YP_004391442.1" /db_xref="GI:330828490" /db_xref="GeneID:10486707" /translation="MEISLLQGLLLGILAFFAGLDLFNGLTHFHRPVVLGPLVGLILG DLPTGILVGGTLELVWMGLAPLAGAQPPNVIIGTIVGATFAITTGVKPDVAVGVAVPF AVAVQMGITFLFSVMSGVMSRCDRMAEAADVRGIERVNYLALLALGTFYFLCAFLPTY FGAEHAKAAIDVLPARLIDGLGVAGGIMPAIGFAVLLKIMMKNVYIPYFILGFVAAAW LQLPVLAIAAAALAMALIDFMRTTTPQARPVQEETEDGI" misc_feature complement(865808..866392) /locus_tag="B565_0790" /note="PTS system sorbose-specific iic component; Region: EII-Sor; cl01506" /db_xref="CDD:186440" gene complement(866477..866950) /locus_tag="B565_0791" /db_xref="GeneID:10486708" CDS complement(866477..866950) /locus_tag="B565_0791" /codon_start=1 /transl_table=11 /product="N-acetylgalactosamine-specific phosphotransferase enzyme IIB component2" /protein_id="YP_004391443.1" /db_xref="GI:330828491" /db_xref="GeneID:10486708" /translation="MPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPIQ QNLMEMVLAEGIAVRFWPLQKVIDNIHKAADRQKILLVCKNPTDFNTLVQGGVPISRI NVGNMHYADGKRQIHKTVSVDEQDITAFRALRDARVECYVQGVPTEPAQDIFNLL" misc_feature complement(866492..866941) /locus_tag="B565_0791" /note="Mannose/sorbose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four...; Region: PTS_IIB_man; cd00001" /db_xref="CDD:28885" misc_feature complement(order(866906..866908,866915..866917, 866927..866929)) /locus_tag="B565_0791" /note="active site" /db_xref="CDD:28885" misc_feature complement(866906..866908) /locus_tag="B565_0791" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:28885" gene complement(866950..868119) /locus_tag="B565_0792" /db_xref="GeneID:10486709" CDS complement(866950..868119) /locus_tag="B565_0792" /codon_start=1 /transl_table=11 /product="putative tagatose-6-phosphate ketose/aldose isomerase" /protein_id="YP_004391444.1" /db_xref="GI:330828492" /db_xref="GeneID:10486709" /translation="MILGYPEEMLRSANGLATAREIRQQPVTWRETLAMVEECRPALT RFLTPLLARQELRIILTGAGTSAFAGRALAPYLSAHLHARVEAIATTDIVTDPAEYLA EDCPTLLISFARSGNSPESVAAVELASQLLSHCHHLVLTCNGEGALYRRCQQDAHSLA LLMPPQTNDRSFAMTSSLTSMMLSCLALFLPERFNRQRCEQLVATSDTILEQVVQRVP AWNEPLPERVIYLGSGSLQGVAQEAALKLLELTAGHLVAMFDSPTGFRHGPKSVVNEQ TLIVLLISNDPYTRQYDLDLLRELRSDGKAAQVVAIADQHHPSIEEGEHIYLPATLHG DDAQLAFCYLLYAQYYAFHTSLGLGISPDNPCPTGQVNRVVQGVNIYPFHQEGVL" misc_feature complement(866971..868080) /locus_tag="B565_0792" /note="putative sugar isomerase, AgaS family; Region: agaS_fam; TIGR02815" /db_xref="CDD:131862" misc_feature complement(867604..867951) /locus_tag="B565_0792" /note="SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal...; Region: SIS_GlmS_GlmD_1; cd05008" /db_xref="CDD:88405" misc_feature complement(order(867760..867762,867835..867837, 867844..867846,867856..867858,867862..867864, 867883..867888,867895..867900,867928..867933)) /locus_tag="B565_0792" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:88405" misc_feature complement(order(867775..867783,867922..867927)) /locus_tag="B565_0792" /note="active site" /db_xref="CDD:88405" misc_feature complement(866986..867438) /locus_tag="B565_0792" /note="AgaS-like protein. AgaS contains a SIS (Sugar ISomerase) domain which is found in many phosphosugar isomerases and phosphosugar binding proteins. AgaS is a putative isomerase in Escherichia coli. It is similar to the glucosamine-6-phosphate synthases (...; Region: SIS_AgaS_like; cd05010" /db_xref="CDD:88407" misc_feature complement(order(867268..867270,867412..867414)) /locus_tag="B565_0792" /note="putative active site [active]" /db_xref="CDD:88407" gene complement(868132..869445) /locus_tag="B565_0793" /db_xref="GeneID:10486710" CDS complement(868132..869445) /locus_tag="B565_0793" /codon_start=1 /transl_table=11 /product="D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit" /protein_id="YP_004391445.1" /db_xref="GI:330828493" /db_xref="GeneID:10486710" /translation="MKSMLALVERHKQGEQTGIYAVCSAHPLVLEAALRLAAEGDELL LVEATSNQVDQFGGYTGMTPADFRDRLYELAAQCHFPAQRLILGGDHLGPNRWQGEPA EQAMAHAGDLIASYVAAGFKKIHLDCSMSCQGDPVPLTDELVAERAARLAQIAEQTCL ATFGESDLVYVIGTEVPVPGGAHEDLAELAVTTPEAARHTLEAHQQAFSKAGLAHIWP RVIGLVVQPGVEFDHTRVIDYRPEKAVPLSRMIEAYPHMVFEAHSTDYQTPEAYRQLV RDHFAILKVGPALTFALREALFALAAIEEELVVAKACSGLRKVMEETMLERPDFWSSH YQGSANECRLARGYSYSDRIRYYWPDSRVDECYARLLANLAAEPIPLPLLSQHLPLQY RKVRQGSLSANPHDLILDQVQEVLRHYASACTAASRRHSQLDPVV" misc_feature complement(868177..869445) /locus_tag="B565_0793" /note="Tagatose 6 phosphate kinase; Region: Tagatose_6_P_K; cl09211" /db_xref="CDD:189196" gene 869720..870580 /locus_tag="B565_0794" /db_xref="GeneID:10486711" CDS 869720..870580 /locus_tag="B565_0794" /codon_start=1 /transl_table=11 /product="Aga operon transcriptional repressor" /protein_id="YP_004391446.1" /db_xref="GI:330828494" /db_xref="GeneID:10486711" /translation="MQTSEKGALGTSERRERIIQQLRSNGSVQVNELATHYQVSTVTI RNDLAFLEKQGVAVRAYGGALLCELGQTVPERTIADKSVLNTPVKQRIGALAATLVPS GCRLILDSGTTTLEVARHLKGHQEILVMTNGMNVANELLEAEGVELLMTGGHLRRKSL SFYGAQAEQSLQNYHFDMLFLGVDGIDLERGVSTHHEDEARLNRCMCQVAERIVVVTD STKFGRRSLHKIIDTLRIHTLITDDAVPADILSGLRNAGIEVLLVPADGSKGQEKQGQ YNPVQSAISG" misc_feature 869720..870508 /locus_tag="B565_0794" /note="DNA-binding transcriptional regulator AgaR; Provisional; Region: PRK09802" /db_xref="CDD:182086" misc_feature 869759..869923 /locus_tag="B565_0794" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 869984..870445 /locus_tag="B565_0794" /note="SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to...; Region: SugarP_isomerase; cl00339" /db_xref="CDD:193777" gene 870628..871383 /locus_tag="B565_0795" /db_xref="GeneID:10486712" CDS 870628..871383 /locus_tag="B565_0795" /codon_start=1 /transl_table=11 /product="3'(2'),5'-bisphosphate nucleotidase" /protein_id="YP_004391447.1" /db_xref="GI:330828495" /db_xref="GeneID:10486712" /translation="MYHPDITELEPVARAAGAAIMAIYSQPFAVEYKSDESPLTAADK GAHEVIVQALAQLTPDIPVLSEESGPEVMAARHGWSRYWLVDPLDGTKEFVSRNGEFT VNIALIEEGAPRWGLVYAPVLGKLWYGGKGLGAWRIVDGKREPIQTRPHREGEAWRVV GSRNHLSQETLDFLAPFGEIELVSMGSSLKFCIIAEGDAELYPRLAPTCEWDTGAAQA VLEGAGGSVTQLDGSPLRYNKPDILNPWFVAKA" misc_feature 870694..871374 /locus_tag="B565_0795" /note="CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family. It has been proposed that CysQ helps control intracellular levels of PAPS, which is an intermediate in cysteine...; Region: CysQ; cd01638" /db_xref="CDD:30136" misc_feature order(870754..870756,870823..870828,870883..870900, 870904..870906,871111..871113,871120..871122, 871195..871197,871231..871233,871258..871263) /locus_tag="B565_0795" /note="active site" /db_xref="CDD:30136" gene complement(871464..871760) /locus_tag="B565_0796" /db_xref="GeneID:10486713" CDS complement(871464..871760) /locus_tag="B565_0796" /codon_start=1 /transl_table=11 /product="YCII-like protein" /protein_id="YP_004391448.1" /db_xref="GI:330828496" /db_xref="GeneID:10486713" /translation="MWYLIYSEDVPDSLPLRKQVRPAHLARLQALQDEGRLLTAGPNP AIDAEDPADAGFTGSTVIAEFASQADAQAWADADPYVAAGVYAKVTIKPFKKVF" misc_feature complement(871467..871760) /locus_tag="B565_0796" /note="YCII-related domain; Region: YCII; cl00999" /db_xref="CDD:186294" gene complement(871785..872348) /locus_tag="B565_0797" /db_xref="GeneID:10486714" CDS complement(871785..872348) /locus_tag="B565_0797" /codon_start=1 /transl_table=11 /product="putative intracellular septation protein" /protein_id="YP_004391449.1" /db_xref="GI:330828497" /db_xref="GeneID:10486714" /translation="MKQFIEFIPLIVFFAVYKFYDIYMATGALVVVTGLQLAYSWIRY RKVEKMQLFTFLLVGFFGGLTVFFHDDTFIKWKVTVINVLFALGLLISRYGFGKNLIK QMLAKELQAPDAVWDKVNLGWVGFFTVCGLLNLYVAFNLPQEMWVNFKVFGLLGMTLV FTLLSGVYLYRHIPAEQLSQQKDEPKK" misc_feature complement(871818..872348) /locus_tag="B565_0797" /note="Intracellular septation protein A; Region: IspA; cl01098" /db_xref="CDD:186332" gene complement(872439..873962) /locus_tag="B565_0798" /db_xref="GeneID:10486715" CDS complement(872439..873962) /locus_tag="B565_0798" /codon_start=1 /transl_table=11 /product="Group II decarboxylase" /protein_id="YP_004391450.1" /db_xref="GI:330828498" /db_xref="GeneID:10486715" /translation="MKLTELFAQADPAFGEAMNTLLESFHHSDDSQAPYQRDLFTHQL DQSRMPAVGQPIEEYLARLATLVPGASHLTSPRYMGHMTAPLPAYTAELSRLLVMLNQ NPMKMESSRLLSFLEREVLAKLHRLIYGRDDAFYGEQMHAKDAALGVMTSGGTIANVT ALWLARNRACGDNLFALYEQGYRGAVILGSRLMHYSFDKGMDLLGLGARSVWRLETDE QNRLSLAALEQALIQCKEQKLKVLALIGVAGSTDFGSIDPLPELAAIAEREQIHFHVD AAWGGPTLFSPRYQGLLAGIEQADTVTLDGHKQLLVPLGTGMLLCRQPDLMMAVKREA PYAIRATSFDQGRFTLEGTRPANALYLDAAFQLFGQQGYAELIEANYDRARLMAELIT SNPAFELMSAPVMNLLSYRCIPPHLQGKVLDETANAQINDFNVSLQKAQRAEGHSFVS RTQRAVVRYGAQPLTLLRAVLLNPLIEERHIRDLLADQQRLGISIARQLFGDSAEPA" misc_feature complement(872523..873914) /locus_tag="B565_0798" /note="Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]; Region: GadB; COG0076" /db_xref="CDD:30425" misc_feature complement(872490..873713) /locus_tag="B565_0798" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl00321" /db_xref="CDD:193768" misc_feature complement(order(873039..873041,873048..873050, 873126..873128,873135..873137,873222..873224, 873489..873491,873498..873503)) /locus_tag="B565_0798" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99742" misc_feature complement(873039..873041) /locus_tag="B565_0798" /note="catalytic residue [active]" /db_xref="CDD:99742" gene 874138..874773 /locus_tag="B565_0799" /db_xref="GeneID:10486716" CDS 874138..874773 /locus_tag="B565_0799" /codon_start=1 /transl_table=11 /product="Hemolysin III" /protein_id="YP_004391451.1" /db_xref="GI:330828499" /db_xref="GeneID:10486716" /translation="MSGVMDYSPREELANRLSHGAGLLLGIVGLVLLLIKGWGQGTQA LVSYSLYGGSLVLLYLASTLYHSMGSGRARRWCKVFDHCAIYLLIAGTYTPFLLVALD TPLAKGLMVVIWALALAGVVFKLVFINRFKKLSLFTYLMLGWLSLVVIYQLYIHLAGE GLLLLGLGGLIYSLGVIFYVAKRIPYNHAIWHLFVLGGSVCHFMAIYGYVA" misc_feature 874138..874770 /locus_tag="B565_0799" /note="Haemolysin-III related; Region: HlyIII; cl03831" /db_xref="CDD:186601" gene 874901..876562 /locus_tag="B565_0800" /db_xref="GeneID:10486717" CDS 874901..876562 /locus_tag="B565_0800" /codon_start=1 /transl_table=11 /product="transport protein" /protein_id="YP_004391452.1" /db_xref="GI:330828500" /db_xref="GeneID:10486717" /translation="MSEIALSISMLSLVAVLGLWLGNWRVYGVGLGIGGVLFGGIIVG HFAGASDLALDAQTLHFIQEFGLILFVYTIGIQVGPGFFSSLRSSGLKLNAFAALLVI LGCVVAAGLHQFFDVPLPVILGVFSGAVTNTPSLGAGQQILAELGAAPGSTGLMGMGY AVAYPFGICGILLTMWLVRVFFRIKIDDEAAQFELQTGKTKESLQTINIAVRNPNMHG LMLSEIPSLDESDVICSRLKRGDELMVPRPESRIELGDLLHLVGERHALHKVLLVLGE EVETSLSTRGTDLRVERVVVTNEQVLGKKIRDLDIKQRYDVVISRLNRAGIELVPTSQ TSLQFGDILNLVGRLDAIEAVTNVVGNVQQKLQQVQMLPVFIGIGLGVLLGSIPFYLP GFPAALKLGLAGGPLVVALILSRIGSIGKLYWFMPPSANLALREIGIVLFLAVVGFKS GAGFVDTLINGDGPAWMLYGMAITLIPLLVVGVLARLYGKMNYLTLCGLLAGSMTDPP ALAFANAMHPTSGASALSYATVYPLVMFLRIISPQLLAIILWAGA" misc_feature 874901..876553 /locus_tag="B565_0800" /note="putative transporter; Validated; Region: PRK03818" /db_xref="CDD:179654" misc_feature 874928..875440 /locus_tag="B565_0800" /note="Predicted Permease Membrane Region; Region: Asp-Al_Ex; cl06061" /db_xref="CDD:141906" misc_feature 875537..875725 /locus_tag="B565_0800" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature 875771..875980 /locus_tag="B565_0800" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature <876140..876499 /locus_tag="B565_0800" /note="Predicted Permease Membrane Region; Region: Asp-Al_Ex; cl06061" /db_xref="CDD:141906" gene 876794..883966 /locus_tag="B565_0801" /db_xref="GeneID:10486718" CDS 876794..883966 /locus_tag="B565_0801" /codon_start=1 /transl_table=11 /product="RTX protein" /protein_id="YP_004391453.1" /db_xref="GI:330828501" /db_xref="GeneID:10486718" /translation="MITNAVTLEQGVTVTQLKGQIYLVAADGSRKLLAEGDVLPKGAV IMSPDGASFMGGGQSFNVQPASEQSEPAEEGDAPQLAQNGAAGTPDDINALQQAILGG ADPTQAFEASAAGGAPAAGGGGIGGVAGASGNGGFVTIDRTGSATIAEATFDTTYNAN GEPPLGAAGEDEVFDLTPPTISVVAPDNTNDTTPTLTGTTDAPVGSIVTLLVTDANGN QQTLTAIVTPGGTFTVDVVTPLAEGTYTVTATVTDPAGNTGSATDSGSVDVTAPAITV DAPDNTNDTTPTITGTSNAVPGSTVTLVVTDANGTQQTLTTTVQPGGGYSVDVTTPLA EGSYQVTASVTDPAGNTGTATDDGSVDSKAPNLTIALDANITDDDVINAAEAGQQIPV SGTVSGEFKVGDIVTLNVNNTAYTGPMDANGRFTILVAGSDLVADKDQSIDASVTSTD AAGNSATATDSEGYSLDTAAPSVVVNIVDEQLTVGETSDVTFTFSEKVTGFELDDLIV VGGTVTGLTSADGGQTWTATFTPDANFTGTASVTVKPESYTDLAGNKGTGGSDTAPVD TQAPNAPTVVIVDDANNDQMLTKAEIGNDQIQVRAEVNHADLAAGGKVTLTINNGGVN SIVQLTLKADGTLLASNGKSYGYQNGTISWTETTPANGKSLTVTATQTDKAGNVSLPG SDNAQILNEAPETANKQANGQEDAASIAIPTLSGSDIDGNVVSFTIKSLPANGILYLN GVAVTVDQSIAVADAGNLTFTPNANWNGNTSFNYAAVDNDGAVDASPATVTIKVDAVN DLPTLTISNGVVVSEEGLANGIADTVGNPDTTNAIKASGTLSVGDIDSSTLNISLNGP AGLTSGGAKVQWCWDAGSKTLVGYTGVIGGADYKAVVEVKLTAPNASGKGEWTYDVTL KGPLDHGDTTSEDKLSFQLDVEVSDGSGVTKDKLDVSVEDDSPIADNSDAVSVVKTDI PNVLTGLFDLTKYSGNQSTLNMAGFTISALGFKSATDSSLVTAVVNGSSSGLGVASGA APYHNLANEIDFRHFADGSSASEQLIVRLDAGKVAYGANIKFSKMFGGELESGVVEFY RGGVLISTLVFNSNASGGEFNQNFQVQQGGFDTMVIKATNNGNTNTSDNSDFTVQSIE FLGSNTAQAIAYGSGTVTPQWGADGKGSIGLVMDPATFENGLRTASGSAIAITASGAN TLVGKDADGNLIFKLEFTPATGKWEFFQYQRMSKPLGDGDIDFQVRVVDGDGDASIGS FATKPLFTPLVQGVSSESVTEGGHLLHKVTLSDSTQETTEYDFAIRGSGNNPASKQDW GNAQFSNGVTYNSTTGKITVPAGVSDFTVTIPTVNDRLVETNETLSVTIGGQSGTGTI VDNDRAPVTTGGYSAGKEDTPLVLKWAQFGASDDQAASDLSVQINTLPLSGKLEYLNA AGQWIAVKVGDLVSYADIDSGHLRFVPSLNESSSNALNGGGTTTGNQQGDYATLGYQI SDGANLSNSGKLVIDIMAVADKPVVDISLTGNGIPLYTQYPSSGISTGAFQSGNFNKG NFGITNSLTDSTTSQDQVVGGNGNDYIVSVKGGGDYFVGGAGNDVLVGGNSTSGDTLD GATGNDILVAGLGGDTLFGGAGTDLAVLMGSRANYVIERRSDGGFNFLVKENGITISK SLYDIELVQFDDGIYQFNQTDGTLTAVQPSVVDYPLEITASLTDRDGSEQFDSLVLTG MPTGSTLYQGSTVLGTVGADGTLTLTGLWNQSALDVKLTGLTLRVPGSSAGQFDLKVE AIAKEVATDQTSSASDQDSIRMSYFLSTEGEPGDQNRTYGNEHNIVVGDLDGSVVLPG QNYNIAFMVDSSGSIGTSAMNTIKNQLAQIFASLKASAGSEGAGTVNIMLVDFDALSN ASISVNLKDSNALNQLQAVIDSMSSGGGTNYEDVFKTVANWFSSSTAQSNSNAKNLTY FITDGQPTYYLGNEGSNPRVLNFSGSSYDVYLNSLLGGTYIPSRVYSSNGYTIIDSAG RVYADGRYSNPIGFMRPDGRGGYTYSTLDGDGGTTSSSTINNSVAGFGLLTGMGVTVE AIGLGANISYNDLKSYDSDGVIMTGVNASDLANAILGTSVNNLPGSDRIDGGAGDDIL FGDAIHFAGINGEGYAAIKQYVAGKLSAGSVTDAQVHDYITDHASEFDQSSTNDKADV LIGGEGNDILFGQGGDDILFGGAGNDILFGGAGNDTLYGESGNDTLYGGSGNDTLYGG SGDDTLSGGLSNDILVGGLGNDILKGDGGADTFTWLQGDTVVDSVAKDYVVDFSKTEG DKLDLSDLLDHDGSHSTTDLKSMLSVFQDNEGVHLQVKESSTAPVTQEIVLMNHTFDS LTGGSGTTANQVIDYMLTNNMLDIDK" misc_feature 879320..879715 /locus_tag="B565_0801" /note="T1SS-143 repeat domain; Region: T1SS_rpt_143; TIGR03660" /db_xref="CDD:132699" misc_feature 882326..882742 /locus_tag="B565_0801" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cd00198" /db_xref="CDD:29222" misc_feature order(882347..882349,882578..882580,882677..882679) /locus_tag="B565_0801" /note="metal ion-dependent adhesion site (MIDAS); other site" /db_xref="CDD:29222" misc_feature <883154..>883525 /locus_tag="B565_0801" /note="RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism]; Region: COG2931" /db_xref="CDD:32755" misc_feature <883367..>883525 /locus_tag="B565_0801" /note="Peptidase M10 serralysin C terminal; Region: Peptidase_M10_C; cl12108" /db_xref="CDD:189247" gene complement(884037..884549) /locus_tag="B565_0802" /db_xref="GeneID:10486719" CDS complement(884037..884549) /locus_tag="B565_0802" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391454.1" /db_xref="GI:330828502" /db_xref="GeneID:10486719" /translation="MDERNKMKKIMGSALALLLVGCAGDNNGGEEYRYNPPIAKATNN TQEMAIPVDLVWARAEKWFTDHGLTIENSQRGSGLMTANVNQSADGLEWLDCGTMGSK VALGNPNLQINLIITQSGNSSVATVNVKGNTELFFVESSGERVPAPSIKPVCVSRGTL EQSLFATLGN" gene 884708..886672 /locus_tag="B565_0803" /db_xref="GeneID:10486720" CDS 884708..886672 /locus_tag="B565_0803" /codon_start=1 /transl_table=11 /product="sensory box/GGDEF domain/eal domain-containing protein" /protein_id="YP_004391455.1" /db_xref="GI:330828503" /db_xref="GeneID:10486720" /translation="MTNMLTPDLLQQIIDQLPMSIFCRDSHGRYLFANREFAREAKLE SPAEVVGKTDAEMPWGDIFRSEDEQLLAGGVPMLYQQLHCNRGGNTCWMEVHKVPLYT PQGEACAVFGVVNEIAQRKSLEQTVKKQQLLQRFLLDAIPDLIRFDDHNGVLLECNQA FLDFIGQGADEVLGQQLPFRLAAPQGMGHGECCLLDASGQGRHMEITRVDVPDGDGHS LGILTLGRDITGLRTTQAQLQQEQHYDSLTGLLKLSRFLQTSRHLGGRSATLVLVDLH HFREINDRFGIRIADRLLSQVAKRLQQLVPPRSLLCRVAADDFSLLLPDFNEPLQGWS QHLQQQLMEHYQVEDHRIQIPVFLGLAQGRASDAERLLSHAEAALAQGKRQQQYCTLF DPELHARLKRRQLIAAQLPLAIKSAQLVAVYQPIICTRTHRLHGAELLCRWPHPELGM ISPDEFIPLAEEMGIIGQLGQLMLEQGCAQLAQWQTAQPDMVLSINLSPLQFRDPALC ERVSACTARHGLKASQLELEITEGVLMENADEIETNLDNLIAAGFQLAIDDFGTGYCS LAYLPRLQVATLKLDRSFTQGLASNSATTAIVRSVIGLGHELGIRITAEGVETPEQQL WLTEAGCDRLQGYLFSRPLPPAEFAASYLA" misc_feature 884750..885070 /locus_tag="B565_0803" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:117025" misc_feature 885050..>885394 /locus_tag="B565_0803" /note="aerobic respiration control sensor protein ArcB; Provisional; Region: PRK11091" /db_xref="CDD:182956" misc_feature 885434..885862 /locus_tag="B565_0803" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(885527..885529,885656..885658) /locus_tag="B565_0803" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(885542..885544,885551..885556,885566..885568, 885578..885580,885644..885646,885650..885661) /locus_tag="B565_0803" /note="active site" /db_xref="CDD:143635" misc_feature order(885632..885634,885713..885715) /locus_tag="B565_0803" /note="I-site; other site" /db_xref="CDD:143635" misc_feature 885929..886648 /locus_tag="B565_0803" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:30163" gene complement(886736..887083) /locus_tag="B565_0804" /db_xref="GeneID:10486721" CDS complement(886736..887083) /locus_tag="B565_0804" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391456.1" /db_xref="GI:330828504" /db_xref="GeneID:10486721" /translation="MSLNMQEWRDETTEIVNELLADGSNPDADYDIEHHFACQDFDRL EKAAVDLFKAGFEVTDAEEMELDDGATIFCFDATIECKLNVEAIVADIAKMLPILEKY GVDYDGWGTYFQD" misc_feature complement(886739..887083) /locus_tag="B565_0804" /note="Protein of unknown function (DUF1260); Region: DUF1260; cl01170" /db_xref="CDD:194058" gene 887337..887412 /locus_tag="B565_t020" /db_xref="GeneID:10486722" tRNA 887337..887412 /locus_tag="B565_t020" /product="tRNA-Phe" /db_xref="GeneID:10486722" gene 887417..887492 /locus_tag="B565_t021" /db_xref="GeneID:10490005" tRNA 887417..887492 /locus_tag="B565_t021" /product="tRNA-Asn" /db_xref="GeneID:10490005" gene complement(887471..887656) /locus_tag="B565_0805" /db_xref="GeneID:10490006" CDS complement(887471..887656) /locus_tag="B565_0805" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391457.1" /db_xref="GI:330828505" /db_xref="GeneID:10490006" /translation="MDQGQKKREEAMPWQHVADRNAAVQCHLWRNALFGSMQQQLEMK KPARLSGLFEFGSSYWT" gene complement(887667..887957) /locus_tag="B565_0807" /db_xref="GeneID:10486723" CDS complement(887667..887957) /locus_tag="B565_0807" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391458.1" /db_xref="GI:330828506" /db_xref="GeneID:10486723" /translation="MNAVQYIAQGAVHLGSLRQDGNIIDPIISPPSHRVTPVFQNVNN GLKVETSPDKPLFNAAELIVLQGRLTPWRHSTKMARLHRSAAIQADKMDKGM" gene 887919..889193 /locus_tag="B565_0806" /db_xref="GeneID:10486725" CDS 887919..889193 /locus_tag="B565_0806" /codon_start=1 /transl_table=11 /product="Proline iminopeptidase" /protein_id="YP_004391459.1" /db_xref="GI:330828507" /db_xref="GeneID:10486725" /translation="MNSPLSYVLDGIHCEPHFFTVPLDHDEPDGDSITLFARTLCRKD KLDEKLPWLLFLQGGPGFGAPRPTANSGWLKRALQEFRVLLLDQRGTGMSSSIHGQIL AKMTPAEQAEYLGHFRADSIVQDAEFIRQELSPKHRWSLLGQSFGGFCCLTYLSLFPD SLREVYITGGIAPISRSAEEVYRATYQRVADKNRAFFARFPHAQGIANRLANHLHQHD VRLPNGQRLTVEQFQQQGLDLGATGAFEELYYLLEEAFIGDKLSPAFLYQVQSMQPFN TNPLFAILHEAIYAEGEATRWAADRVRGEFPAVNWAPGKDFAFTGEMVYPWMFEQFRE LLPLKEAAHLLANKADWGALYDPAQLARNKVPVACAVYAEDMYVEFDYSRETLRGLGN SRAWITNEYEHNGLRADGEVILDRLIALNRDR" misc_feature 888159..888779 /locus_tag="B565_0806" /note="alpha/beta hydrolase fold; Region: Abhydrolase_1; pfam00561" /db_xref="CDD:189601" gene 889544..890269 /locus_tag="B565_0808" /db_xref="GeneID:10486724" CDS 889544..890269 /locus_tag="B565_0808" /codon_start=1 /transl_table=11 /product="carbonic anhydrase" /protein_id="YP_004391460.1" /db_xref="GI:330828508" /db_xref="GeneID:10486724" /translation="MRKSLLACSLLLCPVVFAATPHWEYSGEAGPAHWAKLTPEFGQC AGSNQSPVDLSGLVEAKLAPLVLHYKAGGNTVVNNGHTVQVGYAPGSTLQLDGTRFEL KQFHFHAPSENLIEGKSYPLEGHLVHVSDKGEIAVVAVMFEAGKANPALAAAWGELPA KVGETQALKAPLSAEQLLPENRDYYRFSGSLTTPPCSEGVRWLVMKQPVEVSQAQIDA FKAVMHHPNNRPVQPLNGRVVLQ" misc_feature 889631..890263 /locus_tag="B565_0808" /note="Carbonic anhydrase alpha, prokaryotic-like subfamily. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon...; Region: alpha_CA_prokaryotic_like; cd03124" /db_xref="CDD:28766" misc_feature order(889784..889786,889853..889855,889859..889861, 889865..889867,889877..889879,889916..889918, 890117..890119) /locus_tag="B565_0808" /note="active site" /db_xref="CDD:28766" misc_feature order(889859..889861,889865..889867,889916..889918) /locus_tag="B565_0808" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:28766" gene complement(890356..891264) /locus_tag="B565_0809" /db_xref="GeneID:10486726" CDS complement(890356..891264) /locus_tag="B565_0809" /codon_start=1 /transl_table=11 /product="Indigoidine synthase A-like protein" /protein_id="YP_004391461.1" /db_xref="GI:330828509" /db_xref="GeneID:10486726" /translation="MLNAYLDIQPEVAAALAAGKPVVALESTIISHGMPYPQNVETAR QVEQVVRDNGAIPATIAILDGRLKVGLDAGALEALGRAGHSVTKCSRRDIPFVLARKG MGATTVASTMIIAAMAGIRVFATGGIGGVHRGAQETFDISADLQELAQTPVAVVCAGA KSILDIGLTLEYLETQGVPVIGYQTEELPAFYTRESGFKVDYRLESPAAIAEALRLKW ELGLAGGAVVANPIPTAHAMPKADIDAAIAQALHEADEQGIKGKASTPFLLARVCELT GGNSLAANIQLVLNNAALGARIAASL" misc_feature complement(890359..891192) /locus_tag="B565_0809" /note="Indigoidine synthase A like protein; Region: Indigoidine_A; cl00983" /db_xref="CDD:193995" gene complement(891258..892349) /locus_tag="B565_0810" /db_xref="GeneID:10486727" CDS complement(891258..892349) /locus_tag="B565_0810" /codon_start=1 /transl_table=11 /product="PfkB family carbohydrate kinase" /protein_id="YP_004391462.1" /db_xref="GI:330828510" /db_xref="GeneID:10486727" /translation="MTEREQEILALLRQDPMIAQQELADRLGISRSALASHISSLIRQ GYVQGRGYVLREGPYVVVIGGANMDICGTSHDNLLLGDSNPGKVRTSAGGVGRNIAEN LARLGSDTRLLTAVGNDQYGHHLLEVSQRAGVDVRQTLVLDGHTTSCYLSLHDGSGEM SCAINDMAIIEQLTPARLTPLAGFLGGARLWVLDTNLAIHTLDWLFERQGEHAIFVDT VSVAKVEKIRPWLGKIHTLKPNRSEAEQLCGMTIAGPETWPMVAAWFHRAGVKRLFLS LGEQGIFYSDGEQQGHLPVLGSPVLNVTGGGDAFMAGLAHAWLQQLDIAQTTRFALGC AALTVNCSDTVFSGLSNTAVDRILEEYSC" misc_feature complement(891336..892349) /locus_tag="B565_0810" /note="putative kinase; Provisional; Region: PRK09954" /db_xref="CDD:182165" misc_feature complement(892194..892340) /locus_tag="B565_0810" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(891327..892175) /locus_tag="B565_0810" /note="YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time; Region: YeiC_kinase_like; cd01941" /db_xref="CDD:29363" misc_feature complement(order(891426..891428,891435..891437, 892056..892058)) /locus_tag="B565_0810" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:29363" misc_feature complement(order(891345..891347,891354..891356, 891420..891422,891429..891434,891441..891443, 891522..891524,891630..891632)) /locus_tag="B565_0810" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29363" gene 892554..893006 /locus_tag="B565_0811" /db_xref="GeneID:10486728" CDS 892554..893006 /locus_tag="B565_0811" /codon_start=1 /transl_table=11 /product="TrmH family RNA methyltransferase" /protein_id="YP_004391463.1" /db_xref="GI:330828511" /db_xref="GeneID:10486728" /translation="MEKSAFCCVGLVNPKSPENVGSVMRAAGCYGVDEVYYTGNRFEL ARRFATDTKQMVEKIPLLGVDDLMAFIPQGCVPVVVDLIDGATPLPDYVHPERAFYIF GPEDGTLDPALYGAVKDVVYVPTQGCMNLAASVNVILYDRLAKGFRQP" misc_feature 892578..892973 /locus_tag="B565_0811" /note="SpoU rRNA Methylase family; Region: SpoU_methylase; cl00362" /db_xref="CDD:193788" gene complement(893128..893871) /locus_tag="B565_0812" /db_xref="GeneID:10486729" CDS complement(893128..893871) /locus_tag="B565_0812" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391464.1" /db_xref="GI:330828512" /db_xref="GeneID:10486729" /translation="MLRIGCLLLCSLCAIAHARTADIHVYCDGWPGFCQPDGRGIYLD LVRTIYQPHGYQIVPHIVPYKRAVAMVARQEGDMAMSVYRDEIKGTKQPHQPASADDV TVFMLKQWQPQWRGERSLEGETVLWRRGWVLDKYLPVTMRWHEIDNHEMALQLIGKGR YRYYLTAGVLHAADETPANMYRTILRWIPTYPIFADTEQGDRLLQLWDQEMVNLIRRG TLAEIYRRYHLYDYYRDFLEEQVVKAGEN" gene 894060..894491 /locus_tag="B565_0813" /db_xref="GeneID:10486730" CDS 894060..894491 /locus_tag="B565_0813" /codon_start=1 /transl_table=11 /product="Universal stress protein UspA" /protein_id="YP_004391465.1" /db_xref="GI:330828513" /db_xref="GeneID:10486730" /translation="MPSIKTLLCPVDFSQMSRAVLDYAVFMAQSHQAQLKLIHVVDQL HGFDSYKILHMTAIEITHEMERQARTQLKELVATLPIPATFDIRFGRAADEIVIQAKE DEVELIVMGSHGRSGISHLLVGSVAESVVRHAPCPVLVVRQ" misc_feature 894075..894482 /locus_tag="B565_0813" /note="Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to...; Region: USP_Like; cd00293" /db_xref="CDD:30165" misc_feature order(894087..894095,894177..894179,894387..894392, 894396..894401,894429..894440) /locus_tag="B565_0813" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30165" gene complement(894569..895204) /locus_tag="B565_0814" /db_xref="GeneID:10486731" CDS complement(894569..895204) /locus_tag="B565_0814" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391466.1" /db_xref="GI:330828514" /db_xref="GeneID:10486731" /translation="MRQARGNIDWQRGWLLLPLLLISLIWSSTADASWDQSLYRQLGL AGKLDKQTFRQALNSYQTVRHKRKPILTIIDYSKPSTQRRLFVIDMKRHKLLYHTWVS HGRNSGELAAKHFSNQLNSRQSSLGVYRTAETYLGKHGYSLRLDGLSPGKNSNARKRA IVVHGAAYASPTHLRKYDKLGRSWGCPALPKEQARAIIDTIKGGSVIYAHG" gene complement(895379..896470) /locus_tag="B565_0815" /db_xref="GeneID:10486732" CDS complement(895379..896470) /locus_tag="B565_0815" /codon_start=1 /transl_table=11 /product="outer membrane protein C" /protein_id="YP_004391467.1" /db_xref="GI:330828515" /db_xref="GeneID:10486732" /translation="MKKSALTIAISSLLLASGAHAATVYNQNDTKLEIGGRAQGMYYG TDDNGSEGDQSYFRLHVAGETKIAPEMKAFGFAEYNLPTSGSDNDELRYAYAGIKHDR FGAFSYGRQDGLFTKAVNNYTDVLPEWGGDGLGKDTEVFGTGRTNGLAQYIYTYQGLT LGAQFTGNNDPQNADRSNFKDVNGQTTWNKKGSKEGFAVSANYDFDMGLSLGAAYNQA GKTDEQARYAAFGGDKDAKLMGFGAKYATGDLYLAATYSHGEDHLFVNNGYAEKMDGY EAVAQYTIGKFKPSLAYLRTDVKDSARGIDDTYTEYVSIGAWYNFTENFNAYVDYKLN LLDSVDGKSTNSLGKNTDDVVAVALQYNF" misc_feature complement(895382..896383) /locus_tag="B565_0815" /note="Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane. Individual 16-strand anti-parallel beta-barrels form a central pore, and trimerizes thru mainly hydrophobic interactions at the interface...; Region: gram_neg_porins; cd00342" /db_xref="CDD:30071" misc_feature complement(order(895382..895384,895388..895390, 895394..895396,895496..895498,895505..895510, 896027..896032,896036..896038,896141..896149, 896177..896191,896195..896197,896225..896236, 896240..896248,896252..896254,896270..896284, 896345..896353,896357..896359,896375..896377, 896381..896383)) /locus_tag="B565_0815" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:30071" misc_feature complement(order(896036..896038,896102..896104, 896195..896197,896297..896299,896360..896362)) /locus_tag="B565_0815" /note="eyelet of channel; other site" /db_xref="CDD:30071" gene complement(896813..897613) /locus_tag="B565_0816" /db_xref="GeneID:10486733" CDS complement(896813..897613) /locus_tag="B565_0816" /codon_start=1 /transl_table=11 /product="ribosomal RNA large subunit methyltransferase A" /protein_id="YP_004391468.1" /db_xref="GI:330828516" /db_xref="GeneID:10486733" /translation="MHLQCPRCRSPLHLHEASQGRYCDNKHHFDPAPEGYLDLIPGKK NPKDSDSRALMRAKHHFLEAGHQLPLVEAMAGLLAPLAPQELIHLGCGEGYYCRALAE RLPGWQFAGVDIAKNTIFAAKKAQPDGQFVIADPARAPLQPGSAQVLLVNDLKVKTEQ LVSWLAPGGYLLYLQPGPRHQWQLRVSLNPVSMEHPLSWPTLGGLNPMAQQRCQFSLT MDQAMRSFILETSRLGWRATGEQRHAFAQQGPNELEQDLLLTLWQKPI" misc_feature complement(896822..897613) /locus_tag="B565_0816" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene complement(897739..898377) /locus_tag="B565_0817" /db_xref="GeneID:10486734" CDS complement(897739..898377) /locus_tag="B565_0817" /codon_start=1 /transl_table=11 /product="Cyclic nucleotide-binding transcriptional regulator" /protein_id="YP_004391469.1" /db_xref="GI:330828517" /db_xref="GeneID:10486734" /translation="MVIGKPQSDPTLEWFLSHCHIHKYPAKSTLIHAGEKAETLYYIV KGTVAVLIKDDEGKEMILSYLNQGDFLGEMGMFEENENPERSAWVRAKGSCEVAEISY KKFRQLIQVNPDILMRLSGQMAKRLQHTSQKVGNLAFLDVTGRIAQTLLNLAKQPDAM THPDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQELISAHGKTIVVFGTR" misc_feature complement(897742..898377) /locus_tag="B565_0817" /note="DNA-binding transcriptional dual regulator Crp; Provisional; Region: PRK11753" /db_xref="CDD:183299" misc_feature complement(898021..898356) /locus_tag="B565_0817" /note="effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO...; Region: CAP_ED; cd00038" /db_xref="CDD:28920" misc_feature complement(order(898117..898125,898159..898164)) /locus_tag="B565_0817" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:28920" misc_feature complement(order(898033..898041,898051..898059)) /locus_tag="B565_0817" /note="flexible hinge region; other site" /db_xref="CDD:28920" misc_feature complement(897766..897954) /locus_tag="B565_0817" /note="helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family; Region: HTH_CRP; cd00092" /db_xref="CDD:28976" misc_feature complement(897940..897945) /locus_tag="B565_0817" /note="putative switch regulator; other site" /db_xref="CDD:28976" misc_feature complement(order(897832..897834,897859..897867, 897871..897873)) /locus_tag="B565_0817" /note="non-specific DNA interactions [nucleotide binding]; other site" /db_xref="CDD:28976" misc_feature complement(897814..897834) /locus_tag="B565_0817" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:28976" misc_feature complement(order(897814..897816,897826..897831)) /locus_tag="B565_0817" /note="sequence specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28976" misc_feature complement(897826..897831) /locus_tag="B565_0817" /note="putative cAMP binding site [chemical binding]; other site" /db_xref="CDD:28976" gene 898678..899082 /locus_tag="B565_0818" /db_xref="GeneID:10486735" CDS 898678..899082 /locus_tag="B565_0818" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391470.1" /db_xref="GI:330828518" /db_xref="GeneID:10486735" /translation="MKAKVSWVEGMKFVGESESGHKVILDGANPGEGASPMEMILLAL GGCSSIDVVSILEKARQSVTACHVDVSGERVDSVPRVFEKINLHFVVTGKGLAEKQVA RAVDLSMEKYCSVSLMLEKAVQITHSYQIVEA" misc_feature 898678..899079 /locus_tag="B565_0818" /note="OsmC-like protein; Region: OsmC; cl00767" /db_xref="CDD:193933" gene 899176..899472 /locus_tag="B565_0819" /db_xref="GeneID:10486736" CDS 899176..899472 /locus_tag="B565_0819" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391471.1" /db_xref="GI:330828519" /db_xref="GeneID:10486736" /translation="MKKLIALLPLLGLAACSSPQPTHYQYSQYQCGEEMLAVTYDAQA DMVQFPYAGVYHKLARVESESGAKYSDGLTTFWNQEKQALLTQKGVTLLTCTLK" misc_feature 899260..899454 /locus_tag="B565_0819" /note="Membrane-bound lysozyme-inhibitor of c-type lysozyme; Region: MliC; cl01604" /db_xref="CDD:194175" gene complement(899614..900147) /locus_tag="B565_0820" /db_xref="GeneID:10486737" CDS complement(899614..900147) /locus_tag="B565_0820" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391472.1" /db_xref="GI:330828520" /db_xref="GeneID:10486737" /translation="MRLAYLSVALLALLGGCSSGPAAPTLESGTMLVRPMGNWTYGAT PRYALAEQYQFAGELAEGWLEPMQQAVSRELNGKGWQSAPLDEADLWVAIGVAGGKDM SDGEIFARLGMTPGVYASANQRKGSLAIVLLDRKTQKAVWSSIIQLTSDVSIADSQRQ ALSQQLAAELLNRVPTN" gene complement(900164..901033) /locus_tag="B565_0821" /db_xref="GeneID:10486738" CDS complement(900164..901033) /locus_tag="B565_0821" /codon_start=1 /transl_table=11 /product="phosphoribulokinase 1" /protein_id="YP_004391473.1" /db_xref="GI:330828521" /db_xref="GeneID:10486738" /translation="MSAKHPIIAVTGSSGAGTSTSTNAFRSMFHQLGYTAAVVEGDSF HRYTRPEMDVAIRKAREQGRHISYFGPEANDFGLLESFFQGYGQDGNGQYRRYLHSFD EAVPFNQMPGTFTPWQHLPSNTDLLFYEGLHGGVVTEDHNVARHVDFLIGVVPIVNLE WIQKLIRDTSERGHSREAVTDSIVRSMDDYINFITPQFSRTHINFQRVPTVDTSNPFS AKVIPSLDESMLVIRFRGIKQVDFPYLLSMIDGSFMSRMNTIVVPGGKMGFAMELILR PLIQQLIETGKIT" misc_feature complement(900185..901015) /locus_tag="B565_0821" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(order(900974..900985,900998..901000)) /locus_tag="B565_0821" /note="Active site [active]" /db_xref="CDD:73295" gene complement(901086..901310) /locus_tag="B565_0822" /db_xref="GeneID:10486739" CDS complement(901086..901310) /locus_tag="B565_0822" /codon_start=1 /transl_table=11 /product="alcohol O-acetyltransferase" /protein_id="YP_004391474.1" /db_xref="GI:330828522" /db_xref="GeneID:10486739" /translation="MIIPWQELDGDTLTNLIEHFVLQEGTEYGEQDVPLGVKVDAVRE QLQQGKAVIVYSELHESVNIVMKDRFIEQS" misc_feature complement(901101..901310) /locus_tag="B565_0822" /note="Uncharacterised protein family (UPF0270); Region: UPF0270; cl01180" /db_xref="CDD:186374" gene 901403..902554 /locus_tag="B565_0823" /db_xref="GeneID:10486740" CDS 901403..902554 /locus_tag="B565_0823" /codon_start=1 /transl_table=11 /product="GGDEF family protein" /protein_id="YP_004391475.1" /db_xref="GI:330828523" /db_xref="GeneID:10486740" /translation="MLSAAQLSTPPTLVAHLDQARRQAIARGMVWFWLLQWLMVLFLA IRYEVYRQAGLASDSALPWRFQSELGFVMVALLLLPVIGLFCDYLNDRAWLRAASLVT LVWGCVWAVHLYTLGQVELRGGLGFSNGIMRLNLLAAMIAFYPSWKVLYGFVFGSLLL GIWNELYLRVDFPQLYMLGLGCGLVVLEVGRRMLHRWFELAIMREHENLTLLRQLDQL AKQDPLTGVANRRHFNIELDRALAHSQESGAPLSLILIDVDYFKRFNDHYGHQVGDMC LKEVAQALNRAVRTPSDLVARYGGEEFMLLLPNTDRQAAASVAQRLQDGLASLRLEHL ASEVAPWVTVSQGIASNVSGEGASQLLERADQALYRAKALGRNQFCVAE" misc_feature 902066..902542 /locus_tag="B565_0823" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(902171..902173,902303..902305) /locus_tag="B565_0823" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(902186..902188,902195..902200,902210..902212, 902222..902224,902291..902293,902297..902308) /locus_tag="B565_0823" /note="active site" /db_xref="CDD:143635" misc_feature order(902279..902281,902363..902365) /locus_tag="B565_0823" /note="I-site; other site" /db_xref="CDD:143635" gene complement(902533..903519) /locus_tag="B565_0824" /db_xref="GeneID:10486741" CDS complement(902533..903519) /locus_tag="B565_0824" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase fold family protein" /protein_id="YP_004391476.1" /db_xref="GI:330828524" /db_xref="GeneID:10486741" /translation="MLTESHFHAPWWARNPHLQTILPKWLRRPPARFVAERFELQDGD FVDLAWSGEVSLDERPLIVVFHGLEGSIHSHYAKGLFAHLQQEGREAVLMHFRGCSGE PNRHLQAYHSGAIGDAQELITELSQRFPSKPLIAIGFSLGGNMLVNLLARGCPAALKA AVVVSAPLQLASCAERVNQGFSKVYQNYLLRTMRRNLLSKISQQQKASERWQPRQVEQ IATLRDFDELVTAPLHGFHSASQYYQSCSGLPLLAQIPIPTLILHAADDPFMSHAVIP RPEQLSPTVRYELSQRGGHVGFLHGTPWRPRFWLDERISRWIAEQSHSATQN" misc_feature complement(902563..903510) /locus_tag="B565_0824" /note="putative hydrolase; Provisional; Region: PRK10985" /db_xref="CDD:182883" misc_feature complement(<902740..903207) /locus_tag="B565_0824" /note="Serine carboxypeptidase S28; Region: Peptidase_S28; pfam05577" /db_xref="CDD:114307" gene complement(903586..904485) /locus_tag="B565_0825" /db_xref="GeneID:10486742" CDS complement(903586..904485) /locus_tag="B565_0825" /codon_start=1 /transl_table=11 /product="putative chemotaxis protein" /protein_id="YP_004391477.1" /db_xref="GI:330828525" /db_xref="GeneID:10486742" /translation="MTSKANQSQGMLLFHLSAKQSFAIGTLKVKEIVPYTQLTAMPHS HPTVLGAANMRGSTIPVIDMAMAVGYRPISKEEMPHCFIIITDCRRTLVGFLVRGIDK ITECNWRDIESPPASLGHNVFVTGVTRVNDQLIQLLDVELILSRVYPDDPSHLYPVLT DVQRERIKPMRILLVDDSSVARRQLMAALDYINIPYEVCTNGKDALTLMQTRASQKTP IDILVSDIEMPGLDGYELAFEVQSDSKLAGAYIILHTSLSSEISVERAHQVGAHEALT KFEANELIQAMLRGAEHHDHLLK" misc_feature complement(904048..904464) /locus_tag="B565_0825" /note="CheW-like domain. CheW proteins are part of the chemotaxis signalling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and...; Region: CheW_like; cl00256" /db_xref="CDD:185867" misc_feature complement(903628..903972) /locus_tag="B565_0825" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature complement(903625..903969) /locus_tag="B565_0825" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(903655..903657,903664..903666, 903721..903723,903787..903789,903811..903813, 903955..903960)) /locus_tag="B565_0825" /note="active site" /db_xref="CDD:29071" misc_feature complement(903811..903813) /locus_tag="B565_0825" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(903787..903795,903799..903804)) /locus_tag="B565_0825" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(order(903652..903654,903655..903657)) /locus_tag="B565_0825" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" gene complement(904638..905297) /locus_tag="B565_0826" /db_xref="GeneID:10486743" CDS complement(904638..905297) /locus_tag="B565_0826" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391478.1" /db_xref="GI:330828526" /db_xref="GeneID:10486743" /translation="MHHAIEYHHFSCQDLHAGNRKRTPVGQLLRITRGAALLRLGQNE LLLPAGSSFWLCADALAAFSPLSGCDFDQLSVSLRVAQPQQAGWLQATPLLDALLDSL ALWQRPKEWQGAYGQRLQVILDELQQCAISQQGHGELQACWQALANGQPESLQQWAQQ ADTPVEGSELQQQWQLLQALRLLKGGSKPAQVASKLGYADEAALQAACQQWGVGEDGD Q" gene 905337..905540 /locus_tag="B565_0827" /db_xref="GeneID:10486744" CDS 905337..905540 /locus_tag="B565_0827" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391479.1" /db_xref="GI:330828527" /db_xref="GeneID:10486744" /translation="METRRKKRFIAGAVCPACGKLDNMMLYLEHGVEKVTCVACGDTQ VQTPAEVDKQTREAEEVIGVFRP" misc_feature 905352..905531 /locus_tag="B565_0827" /note="Probable metal-binding protein (DUF2387); Region: DUF2387; cl01410" /db_xref="CDD:154387" gene 905684..906355 /locus_tag="B565_0828" /db_xref="GeneID:10486745" CDS 905684..906355 /locus_tag="B565_0828" /codon_start=1 /transl_table=11 /product="FKBP-type peptidyl-prolyl cis-trans isomerase slyD" /protein_id="YP_004391480.1" /db_xref="GI:330828528" /db_xref="GeneID:10486745" /translation="MKVAPLSVVTLEYTVTDEHGEVIDSTVGKEPLVYLHGTRYLVSG LEAELEGRAVGEAFEVTLAPSQAYGEYDETLVQEVPGELFDGMEVSEGDTFVAETDDG HRPVTVVEVSEEFVKVDGNHPLAGVTLGFKVEIKDVRAATAEELAHGHVHGAGGCGHD HGHDHDHGGCCGGHGHDHDEDHGQGGCCGGAGHGHDHGHDHGDDHGHGGCCGGGGCGG KGHHH" misc_feature 905684..>906124 /locus_tag="B565_0828" /note="FKBP-type peptidyl-prolyl cis-trans isomerase; Region: FKBP_C; cl11587" /db_xref="CDD:187101" gene complement(906782..907642) /locus_tag="B565_0829" /db_xref="GeneID:10486746" CDS complement(906782..907642) /locus_tag="B565_0829" /codon_start=1 /transl_table=11 /product="Import inner membrane translocase subunit Tim44" /protein_id="YP_004391481.1" /db_xref="GI:330828529" /db_xref="GeneID:10486746" /translation="MKKMLTLFAVILAIGLGAPHAEAKKFGGGKSFGKSYKTAPAQPA AKPVDNKNPTLNAQTPPKKSGMMGGLLGGLLAGGLFAYLLGSGAFEGLQGMDFLLIAL LALGAVFLIRTLRKGKVATPQPQQAAYAGYQPPQSAAPQQFEQSNSAPQATGFADSDV PFRLPPGFDMNSFLAGARDHYRTLQEAWNKNDLEKVREYVSPELFEQLKAERAELTGD QHTEVMYVDTQLVRADYGSDWAQVSVRFSGRYMDRQEQVEEDIKEVWHLERDLAKNNA PWHIVGIEQL" misc_feature complement(906788..907168) /locus_tag="B565_0829" /note="Tim44-like domain; Region: Tim44; cl09208" /db_xref="CDD:195818" gene complement(907805..908047) /locus_tag="B565_0831" /db_xref="GeneID:10486747" CDS complement(907805..908047) /locus_tag="B565_0831" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391482.1" /db_xref="GI:330828530" /db_xref="GeneID:10486747" /translation="MCLGVFFRRHLLCHTHKNRSGKGTGILQKKANYGEPYLAAHTII KGQTRVCSTLTILILLRILRSLRLNLLLFIRFTPLV" gene 908000..909400 /locus_tag="B565_0830" /db_xref="GeneID:10486749" CDS 908000..909400 /locus_tag="B565_0830" /codon_start=1 /transl_table=11 /product="Replicative DNA helicase" /protein_id="YP_004391483.1" /db_xref="GI:330828531" /db_xref="GeneID:10486749" /translation="MCMAEQVTAKKDAKTQQLKVPPHSFEAEQSVLGGLMLDNDAWDR VAERVIDQDFYSRPHRLIFQAMTRLSNAGNPIDLITLQEELERSEQLEEAGGFAYLVE IAKNTPSAANINAYAEIVRERAVVREMISVANEIVEAGYEPQGRTSGDLLDLAESKVF KIAEQRTSANEGPQPLKLILEQTVDKIEELFKTPHNGVTGVSSGYNDLDKMTAGLQRS DLIIVAARPSMGKTTFAMNLCEHAALTADKPVLIFSLEMPSEQIIMRMLASVGRIDQT KVRTGQLDDEDWARLSSTMGLLLEKGKMYIDDASGLTPTDVRSRARRVAREHGGLSMI MVDYLQLMRVPALSDNRTLEIGEISRSLKALAKELQCPVVALSQLNRSLEQRADKRPV NSDLRESGSIEQDADLIMFIYRDEVYHDDSPDKGIAEIIIGKQRNGPIGRVRLTFQGQ FSRFDNYAGPAFDDDY" misc_feature 908027..909394 /locus_tag="B565_0830" /note="replicative DNA helicase; Provisional; Region: PRK08840" /db_xref="CDD:181562" misc_feature 908057..908365 /locus_tag="B565_0830" /note="DnaB-like helicase N terminal domain; Region: DnaB; pfam00772" /db_xref="CDD:189711" misc_feature 908618..909346 /locus_tag="B565_0830" /note="DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a...; Region: DnaB_C; cd00984" /db_xref="CDD:29985" misc_feature 908675..908695 /locus_tag="B565_0830" /note="Walker A motif; other site" /db_xref="CDD:29985" misc_feature order(908690..908695,909008..909010,909131..909133, 909239..909241,909305..909307,909338..909340) /locus_tag="B565_0830" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29985" misc_feature 908999..909010 /locus_tag="B565_0830" /note="Walker B motif; other site" /db_xref="CDD:29985" misc_feature order(909023..909028,909047..909055,909128..909154, 909236..909241,909275..909280) /locus_tag="B565_0830" /note="DNA binding loops [nucleotide binding]" /db_xref="CDD:29985" gene 909591..910664 /locus_tag="B565_0832" /db_xref="GeneID:10486748" CDS 909591..910664 /locus_tag="B565_0832" /codon_start=1 /transl_table=11 /product="alanine racemase" /protein_id="YP_004391484.1" /db_xref="GI:330828532" /db_xref="GeneID:10486748" /translation="MKAATAQINTAALRHNLAVVKRHAPACKIIAVVKANAYGHGLLP VARTLVDADAYAVARIEEALMLRSCAVVKPIVLLEGFFSADDLPVLAANNLQTAVHTW EQLEALEQVELPAPVVAWLKLDTGMHRLGVRADEMPAFIERLGKCKNVVQPFNIMTHF SRSDELEQPTTREQIDLFSKLTAPLAGERAMANSAGILAWPDSHCDWVRPGVILYGVS PFPNTIAADYDLQPVMTLKTQLIAVRDHKAGEPVGYGANWVSDRDTRLGVIAIGYGDG YPRMAPNGTSVLINGRIVPLVGRVSMDMSTVDLGPGATDKPGDEAVLWGEGLPVERVA DEIGTIPYELITKLTSRVFMEYV" misc_feature 909591..910661 /locus_tag="B565_0832" /note="alanine racemase; Reviewed; Region: alr; PRK00053" /db_xref="CDD:178827" misc_feature 909597..910661 /locus_tag="B565_0832" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases; Region: PLPDE_III_AR_proteobact; cd06827" /db_xref="CDD:143500" misc_feature order(909684..909686,909690..909692,909702..909704, 909822..909824,909954..909956,909975..909977, 910059..910061,910065..910067,910167..910175, 910215..910226,910614..910616) /locus_tag="B565_0832" /note="active site" /db_xref="CDD:143500" misc_feature order(909684..909686,909690..909692,909702..909704, 909822..909824,910065..910067,910167..910172, 910215..910217,910221..910226,910614..910616) /locus_tag="B565_0832" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143500" misc_feature order(909690..909692,909702..909704,909975..909977, 910065..910067,910614..910616) /locus_tag="B565_0832" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143500" misc_feature order(909690..909692,910350..910352) /locus_tag="B565_0832" /note="catalytic residues [active]" /db_xref="CDD:143500" misc_feature order(910311..910313,910320..910322,910338..910343, 910347..910355,910392..910394,910407..910409, 910425..910427,910491..910493,910497..910499, 910608..910610,910614..910619,910632..910634, 910641..910643) /locus_tag="B565_0832" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143500" gene 910664..911083 /locus_tag="B565_0833" /db_xref="GeneID:10486750" CDS 910664..911083 /locus_tag="B565_0833" /codon_start=1 /transl_table=11 /product="alanine racemase" /protein_id="YP_004391485.1" /db_xref="GI:330828533" /db_xref="GeneID:10486750" /translation="MWQQCLLTLKPRSRGFHLVTDELVAKLPMLADYRIGMVHLLLQH TSASLTLNENCDPSVRSDMEAHLHRLAPEDAPYYRHTYEGADDMPAHIKSSLLGVSLL LPVRDGQLALGTWQGIWLGEHRVDGGARKVLVTLQGE" misc_feature 910712..911074 /locus_tag="B565_0833" /note="Uncharacterised protein family UPF0047; Region: UPF0047; cl00439" /db_xref="CDD:193820" gene complement(911203..911928) /locus_tag="B565_0834" /db_xref="GeneID:10486751" CDS complement(911203..911928) /locus_tag="B565_0834" /codon_start=1 /transl_table=11 /product="peptidase E" /protein_id="YP_004391486.1" /db_xref="GI:330828534" /db_xref="GeneID:10486751" /translation="MELLLLSNGKANEFPGLLGWARDRVQSLLARKQVKRIMLIPYAV IRSDWDARANELTESLGIETISIHHFDDPVEAVNQADAIFISGGNTWRLNQMLHENGL IVPIQRAVRERGVPYVGWSAGCNVATPSIRTTNDMPVCNAAVLPALGLFPLQINPHYL DASISGHMGETRDERLAEFCAINPSEYVVALREASLLQISGDTVEYWSAREQDFKIFK HGQEPQAFMDAAPLAELTPFKVV" misc_feature complement(911317..911925) /locus_tag="B565_0834" /note="Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E; Region: GAT1_Peptidase_E; cd03146" /db_xref="CDD:153240" misc_feature complement(order(911350..911352,911413..911415, 911455..911457,911521..911523,911566..911568, 911665..911667)) /locus_tag="B565_0834" /note="active site pocket [active]" /db_xref="CDD:153240" misc_feature complement(order(911563..911565,911665..911667)) /locus_tag="B565_0834" /note="oxyanion hole [active]" /db_xref="CDD:153240" misc_feature complement(order(911350..911352,911455..911457, 911566..911568)) /locus_tag="B565_0834" /note="catalytic triad [active]" /db_xref="CDD:153240" misc_feature complement(911566..911568) /locus_tag="B565_0834" /note="active site nucleophile [active]" /db_xref="CDD:153240" gene complement(912173..913534) /locus_tag="B565_0835" /db_xref="GeneID:10486752" CDS complement(912173..913534) /locus_tag="B565_0835" /codon_start=1 /transl_table=11 /product="succinyl-CoA synthetase subunit alpha" /protein_id="YP_004391487.1" /db_xref="GI:330828535" /db_xref="GeneID:10486752" /translation="MNNINKTLLAAAISLGMLAGCNSDNDSKAADPMVRFATFNLSFD RTAAGMLTGELALTRTEQDALLARLAEGSLSGATETKAKNVQQIRNVAEIIQRTRPDV FLLNEFDNDGKGESTADLKAFNDNYLAHAQHAEVTAISYPVMQNFATNTGLMSGYDLN LDGKVNSGPDDAWGFGNYHGQYAFAVMSKYPIDTKQIRTFQNFKWKDMPGEQNPIIDD CNNPKVKIPASRQCGDAWYSDAAWQQYPLSSKNHADVPVRIKTEKGEEVIHFLISHPT PPIFANAARHTVKHNRAEIAFWNDYVKGLNYMTDDKGTKGGLAKNAKFVIAGDLNADP LTGDGDLTAIQDLLNNPLMNQAITNGTLIPVSEGGPECVSKGTDCKRNLNRPNPERIT NSSVLQLDHVIPSANLNAVKSGVFWPASFEAGYHLVYDAKLGIAKGVSSDHRMVWVDL KLD" gene complement(913765..914577) /locus_tag="B565_0836" /db_xref="GeneID:10486753" CDS complement(913765..914577) /locus_tag="B565_0836" /codon_start=1 /transl_table=11 /product="hemin ABC transporter ATP-binding protein" /protein_id="YP_004391488.1" /db_xref="GI:330828536" /db_xref="GeneID:10486753" /translation="MQPLSSSLSSPLLTCTRLSLRRGQRQILDGLDLSLESGTLTALL GPNGAGKSSLLKCLTGELEYEGSITLFGADRQQWDSSQLAHRLGVLPQSSSLNFPFLC EEVVAMGRLPHSEPAARRDEIVAAAMTHAGVEHLAKRLYPGLSGGERQRVQFARVLAQ IWQAPSPTEQAEQPRLLLLDEPTSALDLKYQHQLLTMARALASRNTAVLVVLHDLNLA ARYADRLVMLERGKLMADGTPAEVLTPELIARLYDYPAQVIHHPESGLPMVV" misc_feature complement(913768..914511) /locus_tag="B565_0836" /note="hemin importer ATP-binding subunit; Provisional; Region: hmuV; PRK13548" /db_xref="CDD:184133" misc_feature complement(913867..914511) /locus_tag="B565_0836" /note="ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC...; Region: ABC_Iron-Siderophores_B12_Hemin; cd03214" /db_xref="CDD:72973" misc_feature complement(914422..914445) /locus_tag="B565_0836" /note="Walker A/P-loop; other site" /db_xref="CDD:72973" misc_feature complement(order(913939..913941,914035..914040, 914302..914304,914419..914427,914431..914436)) /locus_tag="B565_0836" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72973" misc_feature complement(914302..914313) /locus_tag="B565_0836" /note="Q-loop/lid; other site" /db_xref="CDD:72973" misc_feature complement(914119..914148) /locus_tag="B565_0836" /note="ABC transporter signature motif; other site" /db_xref="CDD:72973" misc_feature complement(914035..914052) /locus_tag="B565_0836" /note="Walker B; other site" /db_xref="CDD:72973" misc_feature complement(914017..914028) /locus_tag="B565_0836" /note="D-loop; other site" /db_xref="CDD:72973" misc_feature complement(913933..913953) /locus_tag="B565_0836" /note="H-loop/switch region; other site" /db_xref="CDD:72973" gene complement(914589..915620) /locus_tag="B565_0837" /db_xref="GeneID:10486754" CDS complement(914589..915620) /locus_tag="B565_0837" /codon_start=1 /transl_table=11 /product="hemin ABC transporter permease" /protein_id="YP_004391489.1" /db_xref="GI:330828537" /db_xref="GeneID:10486754" /translation="MMRLPLSWLLAFTTAALALLLLGSLATGPMTLTLGESLRALFAG QESGIESHKLLIVQEIRLPRTLLCIAVGGILGLCGAVMQGLFRNPLADPGIIGVSGGA ALGAALAIVLLAPLGQQLQATIGVGLLPLLAFLGGALTTTLVYLLGTREGGTSVTVML LAGVAITALSGAVIGLLTYLADDQMLRNLSLWQMGTLAAGKPADVALALLTLAALLWL FMRDANPLNALLLGEGEARHLGINVQSLKRRLILLTAAGVGVAVAVSGMIGFVGLVVP HLVRLLAGPNHVRLLPLSALLGAALLLAADMLARTLLAPAELPVGIITALLGAPFFIW LLVKGRRAL" misc_feature complement(914613..915428) /locus_tag="B565_0837" /note="Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+. PBP-dependent ABC transporters consist...; Region: TM_ABC_iron-siderophores_like; cd06550" /db_xref="CDD:119348" misc_feature complement(order(914760..914762,914781..914783, 914904..914912,914916..914933,914937..914942, 914946..914954,914958..914963,915354..915362, 915372..915374)) /locus_tag="B565_0837" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119348" misc_feature complement(order(914613..914615,914622..914627, 914634..914636,914643..914648,914655..914657, 914811..914813,915039..915041,915048..915053, 915087..915089,915093..915098,915105..915107, 915114..915119,915126..915131,915138..915143, 915147..915149,915336..915338,915351..915353, 915357..915359)) /locus_tag="B565_0837" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119348" misc_feature complement(order(914664..914666,914688..914690, 914823..914825,914835..914837,915009..915011, 915087..915089)) /locus_tag="B565_0837" /note="putative PBP binding regions; other site" /db_xref="CDD:119348" gene complement(915617..916468) /locus_tag="B565_0838" /db_xref="GeneID:10486755" CDS complement(915617..916468) /locus_tag="B565_0838" /codon_start=1 /transl_table=11 /product="hemin ABC transporter periplasmic protein" /protein_id="YP_004391490.1" /db_xref="GI:330828538" /db_xref="GeneID:10486755" /translation="MGRRLALAITLLCSSLSPFSAVAADGQKERIVSIGPATTELILA LGGESSLIATDVSSPLPKGLPKVGYHRALAAEGILSLSPTRLVGSDEMGPAPTLDQLR RAGVKVEVLDTAPTLANLNQRIDTLSSLLGDKAAGDRLKAEIQAQTAQLAAQAKQNKP FKVAFLLLHKGQPTSIAGGDTTASALISLAGGINPVAELRNYKPVSAESLIEMQPDLV LVSGRDWQQYADPAKVLAEVPALAATPAGKRNAIHAIDGHALQGGLSLNSLQQANQIA QWIKQGS" misc_feature complement(915698..916384) /locus_tag="B565_0838" /note="Helical backbone metal receptor (TroA-like domain). These proteins have been shown to function in the ABC transport of ferric siderophores and metal ions such as Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is formed in the interface...; Region: TroA-like; cl00262" /db_xref="CDD:193735" misc_feature complement(915698..916378) /locus_tag="B565_0838" /note="Periplasmic binding protein; Region: Peripla_BP_2; pfam01497" /db_xref="CDD:144914" misc_feature complement(order(916082..916084,916169..916171, 916178..916183)) /locus_tag="B565_0838" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:29734" gene 916639..917151 /locus_tag="B565_0839" /db_xref="GeneID:10486756" CDS 916639..917151 /locus_tag="B565_0839" /codon_start=1 /transl_table=11 /product="HuvX protein" /protein_id="YP_004391491.1" /db_xref="GI:330828539" /db_xref="GeneID:10486756" /translation="MSIAQRIHALLEQDPGAHPSTLAAQLAISEWEVVRHLPAELVTL LPADRAQGLLEDLADWGPVTTIVESEGSIFEVKAPFPKGKDARGYYNLMGRDGELHGH LKLDNVAGIALVSKLFMGKEGHSFQFFGHSGRCIFKVYLGRDEKRQLLADQVTRFMAL RHNSQEEVKA" misc_feature 916702..917121 /locus_tag="B565_0839" /note="ChuX-like family; Region: DUF1008; cl01509" /db_xref="CDD:154443" gene 917148..917705 /locus_tag="B565_0840" /db_xref="GeneID:10486757" CDS 917148..917705 /locus_tag="B565_0840" /codon_start=1 /transl_table=11 /product="Heme iron utilization protein" /protein_id="YP_004391492.1" /db_xref="GI:330828540" /db_xref="GeneID:10486757" /translation="MSERQERLQNRLQPEIREFRDSCRTLQLATVDGEGNPNASYAPF VLQEDGYYVLISEIARHARNLQQVPRVSLMLIEDESGARELFARKRLTFDAVAEVVAR DDARWSKAVAALEGRFGEIIKGLSNLKDFKLFRLKPEQGLFVKGFGQAFAVSGDELVD FVHLVEGHKRIDNGAELTSPADAPV" misc_feature <917148..917657 /locus_tag="B565_0840" /note="Putative heme iron utilization protein [Inorganic ion transport and metabolism]; Region: HugZ; COG0748" /db_xref="CDD:31091" misc_feature 917187..917396 /locus_tag="B565_0840" /note="Pyridoxine 5'-phosphate (PNP) oxidase-like proteins; Region: PNPOx_like; cl00381" /db_xref="CDD:193794" gene complement(917793..918176) /locus_tag="B565_0841" /db_xref="GeneID:10486758" CDS complement(917793..918176) /locus_tag="B565_0841" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="YP_004391493.1" /db_xref="GI:330828541" /db_xref="GeneID:10486758" /translation="MRLLSATLLLIVPLLSACSSLPGQKYDGPEPLFLTHINEEGSKR FTFEAAPNDTLPRGLSAAQSQRLLEQREALQENLLTETLATKQYCRQGYIVLSQTSWK VRGECNETATDADRRAFPNKASWQD" gene complement(918214..918768) /locus_tag="B565_0842" /db_xref="GeneID:10486759" CDS complement(918214..918768) /locus_tag="B565_0842" /codon_start=1 /transl_table=11 /product="isochorismatase family protein" /protein_id="YP_004391494.1" /db_xref="GI:330828542" /db_xref="GeneID:10486759" /translation="MDVLLIIDVQQGLFNEPRYRQEQVLANINRAAAHVRQQQGRVIY IQHDSPPGTELEPGTPGWQLHSALQPAKGESRVRKTACDSFLDTELAFLLAEQPVDRL ILCGCATDFCVDTTVRSAASHGYEVLVLSDGHTTADRPHLSAAQITEHHHWMWRHLSL PEGRSVTLLTTDELLAVTPALQPC" misc_feature complement(918316..918762) /locus_tag="B565_0842" /note="Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia; Region: nicotinamidase_related; cd01014" /db_xref="CDD:29552" misc_feature complement(918253..918759) /locus_tag="B565_0842" /note="Isochorismatase family; Region: Isochorismatase; pfam00857" /db_xref="CDD:189743" misc_feature complement(order(918433..918435,918532..918534, 918745..918747)) /locus_tag="B565_0842" /note="catalytic triad [active]" /db_xref="CDD:29552" misc_feature complement(918445..918450) /locus_tag="B565_0842" /note="conserved cis-peptide bond; other site" /db_xref="CDD:29552" gene complement(918794..919765) /locus_tag="B565_0843" /db_xref="GeneID:10486760" CDS complement(918794..919765) /locus_tag="B565_0843" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391495.1" /db_xref="GI:330828543" /db_xref="GeneID:10486760" /translation="MIRRLPLLALPLLLAACATPTQPTVSSQLQTLYDYRLSSEGDAD LTLEQAIARIADADIILVGELHSHPAVHLLQSSLLSGLYTAGQQHGRPLVLSMEQFSR ADQKTLDAYLANQIGEAALIREGNAWPNYPSDYRPLVEFAKAHQMPVIAANAPKPLVS CVGQEGAEWLDKLPATRRSQLARQLTLGDDPYRQKFMASMHHGDADSNARRFAAQTSW DDTMAESMVDYLAKHPGQQIMHIAGNFHVEGGLGLASRIASRNPALKVALVVPRTDET SVADPAADVQVTIMPLPKRWQNSDEMKQDMGALHQSRSRDCSQWLQP" misc_feature complement(918992..919633) /locus_tag="B565_0843" /note="Protein of unknown function, DUF399; Region: DUF399; cl01139" /db_xref="CDD:154223" gene 919959..922064 /locus_tag="B565_0844" /db_xref="GeneID:10486761" CDS 919959..922064 /locus_tag="B565_0844" /codon_start=1 /transl_table=11 /product="outer-membrane heme receptor" /protein_id="YP_004391496.1" /db_xref="GI:330828544" /db_xref="GeneID:10486761" /translation="MTHHNALSLVALAVAAGLSSQVFAATQKADEVVVVSGSRMEQKL EDVSGPISVITAKQIEEQVVTNVADLFRYEPGVTVLGGQGDAQTFIIRGMGENRVKVV RDGVRQNDAYSKGGVGQSYFDTDMIKQVEVAKGPASAAYGSDALGGVIAITTKDASDF LKGKDSYLDVTSGYASSSHQKMAGFTGALRTGEVENLLRYTWRDGGVTQNFDSTKNDF DIGTHALLLKSKWNLSDEQFLKLTVDYLTDGEEPDAVKLNKVGTGTARVFDQPITDKQ TDNLSVVLDHGIALNQGWADRMDSKVYFARTKQTLDQYASSKYPVSPGNPYVTKNSLD HNVFDQKNIGAQLQFHKAVANHRLAWGAEYEHTDNERTRYKGPTTPGDFVGYNELSFP ATTSERSALWAFDEIKFGERWVLTPGARYDYYRMTPDNDPAYTGDKLHKFSEGELSPK LGLVFKAHEAANLFAQYSHGFKAPMYDSAFSTLNHQAYGYRIEPNPNLNPESSDGIDL GVRGSSNGFSYEVASFYNKFEDFIEMVEVGKEGRTAVYQYQNLSKATTKGVEAKADYW LNDIVNVWGNLAYIEGKDGDGNYINSLSPLNGSIGVRLEQSQWNFNTALRFADDMDKV RKDSKGNDYVKSAGWGVVDMYAQFNPMTDLQLNVGVFNLFDKEYTSYERIAGRAEGSD NSMMTEPGRNLSARVKYVF" misc_feature 920055..922061 /locus_tag="B565_0844" /note="TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; Region: TonB-hemlactrns; TIGR01786" /db_xref="CDD:162537" misc_feature 920106..922061 /locus_tag="B565_0844" /note="TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel; Region: ligand_gated_channel; cd01347" /db_xref="CDD:73259" misc_feature order(920106..920135,920163..920192,920223..920240, 920259..920282,920328..920360,920394..920420) /locus_tag="B565_0844" /note="N-terminal plug; other site" /db_xref="CDD:73259" misc_feature order(920883..920885,920964..920966) /locus_tag="B565_0844" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:73259" gene 922354..923508 /locus_tag="B565_0845" /db_xref="GeneID:10486762" CDS 922354..923508 /locus_tag="B565_0845" /codon_start=1 /transl_table=11 /product="MFS transporter, phenyl propionate permease (PPP) family" /protein_id="YP_004391497.1" /db_xref="GI:330828545" /db_xref="GeneID:10486762" /translation="MPAFSWLALFFGAFYFVYGAYLPFWSLWLEGVGVSAEMIGLLLG AGMAIRFAGNLMVMGQIKGAGHLLPVTRLLSLLSLLAFLGFYLSHNLWWLVGLTLLAN FIYPTLMPVGEALATRMVVQAHLDYGKVRLCGSFAFIVASTLVGALVGNFGSDWILHT MVAGLVLMLLLSWLPLYPAPQDSQGERAKASLLATLRSAPVRRFLLLTALLQGSHAAY YGFSAIYWKAQGYSGTIIGYLWALGVVAEICMFAADKRFLQRFGAQSLFIAGAIGCVV RWVLLGASTELWVLVLGQLLHSVTFGMSHLGAVRFMTRQLPAEQLIPTQALYAALGLG MTVAALMALCGVLFEPLGGGIFFLMVLVVLPVFFLRLRPFASSAQESAPA" misc_feature 922357..923418 /locus_tag="B565_0845" /note="putative 3-phenylpropionic acid transporter; Provisional; Region: PRK11128" /db_xref="CDD:182984" gene complement(923586..924803) /locus_tag="B565_0846" /db_xref="GeneID:10486763" CDS complement(923586..924803) /locus_tag="B565_0846" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391498.1" /db_xref="GI:330828546" /db_xref="GeneID:10486763" /translation="MSRHITLFALWLLPLWACAGNDANGPRYLIEQGASANVLQVRLT MQGKPPFTLLPARQLPGSATPVSPALVCLADNQPVALNQPFSCKEVGWQITLTPAPAL GADASAQQSLLFAPNQWLLTEWGNFVRQMGSRQGKVCLPDGSCQPLPDVNQPPLILPF GLDTVPVTKPDPRLVLSHDETANQLDLPALQQQLNEIIDYLAFQLDVDPPTHPWQLVW LGRDVATRSLGGATGDQVFVANYPTEAGKPTPQAPLRLLRTSAHEAVHILSARHSAPQ PTWVNESLAEYLAIKALRRFRLHQVTAVNELAERGKQLPHSESGLYRAAREVLAGDRS YYPLFYVKGSAFWEALERELQHNDVTLAQLLPQLGWLPDGRFDAASNELLAGTIGSDT WRRLSRLYLGEQQ" misc_feature complement(923742..>924047) /locus_tag="B565_0846" /note="Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins); Region: GluZincin; cl14813" /db_xref="CDD:196830" misc_feature complement(order(923958..923960,924006..924008, 924018..924020)) /locus_tag="B565_0846" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:189001" gene complement(924811..925020) /locus_tag="B565_0847" /db_xref="GeneID:10486764" CDS complement(924811..925020) /locus_tag="B565_0847" /codon_start=1 /transl_table=11 /product="XRE family transcriptional regulator" /protein_id="YP_004391499.1" /db_xref="GI:330828547" /db_xref="GeneID:10486764" /translation="MPIIIRLDALLAERKMTARELAQRIDITEANLSILKNGHAKAVR FSTLEAICRELNCQPGDLLGYEQER" misc_feature complement(924823..925020) /locus_tag="B565_0847" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cl09100" /db_xref="CDD:195788" gene complement(925028..925576) /locus_tag="B565_0848" /db_xref="GeneID:10486765" CDS complement(925028..925576) /locus_tag="B565_0848" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391500.1" /db_xref="GI:330828548" /db_xref="GeneID:10486765" /translation="MISNKLERSSMLIEWLLLLALLATPLITLLEVWTPFGGADLLQE KLNTILSRPGINPADYPLHFSTRLLGTLVQLLPDLVFMMMLWQLRQLFRGYRAGLLFT FEQIRRYRQIGLLLCTTFLVELILAPLLDTVLTMRGPEVLGTIALSTSDFRVLLAGLI VLALALVMREAKLLADEQQLTV" misc_feature complement(925034..925306) /locus_tag="B565_0848" /note="Protein of unknown function (DUF2975); Region: DUF2975; pfam11188" /db_xref="CDD:151630" gene 925792..929247 /locus_tag="B565_0849" /db_xref="GeneID:10486766" CDS 925792..929247 /locus_tag="B565_0849" /codon_start=1 /transl_table=11 /product="Proline sensor PrlS" /protein_id="YP_004391501.1" /db_xref="GI:330828549" /db_xref="GeneID:10486766" /translation="MHQGWLLIGLSLTYLGLLFLIAFVADKHKRHRLKGQPLLYSLSL AVYCTSWTFFGTVGQASESPWSPVPIYLGPMLVFLFGWRLLARLILVAKREHITSIAD FIAARYGKSQRLAMVISLIAIMGILPYLVLQLKAIVTGLDLLMVNSGGISPTSNTSEL ALGVTLLLALFSILFGTRHLDATEHHRGMVVAIAFESVVKLLAFIAVGGFALWLILSK PGEAHEQVTRDFFAQVVAVSPGNLLELAIYTVLAMCAVICLPRQFHVTVVENNQGQDL HWARWIFPLYLFVMGLFIWPLALAGKQWVGAEMASDTYVISLPMALGFDGMAMLAFLG GTSAATGMVIVCTIALAIMVSNDLVLPVLLRRFWRQGRDERLVRLLLQVRRGAILLIL LAAWGLYLWLGDLTSLSRIGYLSFGAVAQFAPALLLGLYWRHGNRKGVYLGLFLGVSL WFVTLLVESGLLAGSPLAELLAPPDWPAFRELSLGAWCIFLSLLFNLLGYVAGSLLSR PAVSERLQAANFVGKPSRDTAALYQARVSVKELEMLAARFVGSSRVKRAFGRFAGERG GTLAPQMQASAELIAHTERLLAGVFGTSSARLVLASALQGRNMQLEEIATIVDEASDV FRFNRGLLQGAIEHIGQGISVVDRELRLVAWNRRYIELFHYPPGLIQAGRPIEEIIRY NAQQGLCGPGDIEDHVARRVAFMKRGSAHISARERPDGRVIEMQGNPMPAGGFVMTFT DITPFRDAERVLREANEHLEARVAERTRELSELNRQLLLVNQQVERANQSKSRFLAAV SHDLTQPLNAAKLFTSSLLEMLPDAGEQARIARHIDDALGATEDLITDLLDISRLEAG KFKAKKLDFALRDLLDNLKAEFGVLAQAGGIHFSVVESKHAVHSDVRLLRRVLQNFLT NAFRYNPGGRVLLGCRRMGEKIRIEVWDNGPGIPQDKQEAIFDEFSRLDHSRTAKEQG LGLGLAIARGISLVLGHQLTLQSWPGKGSVFAVTLNLATRPVTAHQLAAPVVRDSQLE GVAVLCIDNERDILTAMSTLLGRWGCEVRCAVDLAEAEALVADGFVPRLVLSDYHLDD GKTGLEALAVLQRVCGDELGGIIISADRKSELQAQIREQGYGYISKPVKPLKLRALMN SLLLR" misc_feature 925900..927342 /locus_tag="B565_0849" /note="Sodium:solute symporter family; Region: SSF; cl00456" /db_xref="CDD:186007" misc_feature 927697..928041 /locus_tag="B565_0849" /note="PAS fold; Region: PAS_7; pfam12860" /db_xref="CDD:193334" misc_feature 928153..928347 /locus_tag="B565_0849" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature order(928171..928173,928183..928185,928195..928197, 928204..928206,928216..928218,928225..928227, 928276..928278,928288..928290,928297..928299, 928309..928311,928318..928320,928330..928332) /locus_tag="B565_0849" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature 928189..928191 /locus_tag="B565_0849" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature 928504..928812 /locus_tag="B565_0849" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(928522..928524,928534..928536,928543..928545, 928609..928611,928615..928617,928621..928623, 928627..928632,928711..928722,928768..928770, 928774..928776,928789..928794,928798..928800) /locus_tag="B565_0849" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 928534..928536 /locus_tag="B565_0849" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(928621..928623,928627..928629,928711..928713, 928717..928719) /locus_tag="B565_0849" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature 928873..929238 /locus_tag="B565_0849" /note="FOG: CheY-like receiver [Signal transduction mechanisms]; Region: CheY; COG0784" /db_xref="CDD:31127" misc_feature 928894..929238 /locus_tag="B565_0849" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(928903..928908,929038..929040,929065..929067, 929128..929130,929182..929184,929191..929196) /locus_tag="B565_0849" /note="active site" /db_xref="CDD:29071" misc_feature 929038..929040 /locus_tag="B565_0849" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(929047..929052,929056..929058,929062..929067) /locus_tag="B565_0849" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 929191..929199 /locus_tag="B565_0849" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" gene 929673..932267 /locus_tag="B565_0850" /db_xref="GeneID:10486767" CDS 929673..932267 /locus_tag="B565_0850" /codon_start=1 /transl_table=11 /product="chitinase 92" /protein_id="YP_004391502.1" /db_xref="GI:330828550" /db_xref="GeneID:10486767" /translation="MLSPKPTMLALAVGLCCASSAYAAAPGKPTIGWGPTKFSIVEVD QAATAYNNLVKVKDAADVEVNWNLWSGDLGQSAKVLLNGQEVWSGPSTAAGSATFKVK KGGRYQMQVALCNADGCTLSDAKAIVVADTDGSHLAPLKAPLQENNKPYANKSGKVVG TYYVEWGVYGRKFTVDKIPAQNLTHILYGFTPICGGDGLNDSLKEIEGSFQALQRACA GRADFKVAMHDPWAAIQMPQGSLTAHDEPYKGNFGALMALKQAYPNLKILPSVGGWTL SDPFYFLGDKTKRDVFVGSVKEFLQTWKFFDGVDIDWEYPGGQGANPKLGSPSDGATY VTLMKELRAMLDELEAETGRQYELTSAIGAGGDKIQDVDYKAAQPYMDHIFMMTYDYN GAWSNTELGHQTNLYAASWDPDTKYTTDKAVNQLLAQGVEPGKLVVGAAMYGRGWTGV SGYQGNNPFTGKATGKVKGTWEDGVVDYRDIVNNRMGAGWEKGYDEVAEAPYLFKAST GDLITYDNDRSVKAKGQYVLANKLGGLFSWEIDADNGDILNAMHEGLGHGSGVTPPAN KPPLANAGSDLKVTGPTEVTLDGSASHDPENGALTYSWKQISGPQAALLDATQAKARL VLDAVAADINLVFELTVTDDQQLSAKDQVVVTNKAPQANLAPVVSVPATASVEAGKQV TIKATASDPNGDPLTYQWSVPAGITATGQNSATLVVTGPNVTSDTGYDLSVTVSDGGL DASAATRLTVKPASSGGGCTATDPDAANWPVWKAASTYNSGDKVSHNQLVWQAKYWTQ GNEPSRTADQWLLVSKVQLGWDANVAYNGGELTTHNGRQWKAQYWTKGNEPGKHDVWQ DVGAASCK" misc_feature 929751..930065 /locus_tag="B565_0850" /note="Chitinase N-terminus domain. Chitinases hydrolyze the abundant natural biopolymer chitin, producing smaller chito-oligosaccharides. Chitin consists of multiple N-acetyl-D-glucosamine (NAG) residues connected via beta-1,4-glycosidic linkages and is an...; Region: Chitinase_N_term; cd02848" /db_xref="CDD:30335" misc_feature 930141..931301 /locus_tag="B565_0850" /note="Glycosyl hydrolase family 18; Region: Glyco_18; smart00636" /db_xref="CDD:128884" misc_feature 930147..931301 /locus_tag="B565_0850" /note="The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is...; Region: GH18_chitinase; cd06548" /db_xref="CDD:119365" misc_feature order(930156..930158,930240..930242,930600..930602, 930606..930608,930612..930614,930831..930833, 930837..930842,930999..931001,931284..931286) /locus_tag="B565_0850" /note="active site" /db_xref="CDD:119365" misc_feature <931422..>931958 /locus_tag="B565_0850" /note="REJ domain; Region: REJ; pfam02010" /db_xref="CDD:145278" misc_feature 931980..932099 /locus_tag="B565_0850" /note="Chitin/cellulose binding domain. Putative carbohydrate binding domain found in many different glycosyl hydrolase enzymes. May occur in tandem arrangements; Region: ChtBD3; cl00046" /db_xref="CDD:193627" misc_feature 932127..932237 /locus_tag="B565_0850" /note="Chitin/cellulose binding domain. Putative carbohydrate binding domain found in many different glycosyl hydrolase enzymes. May occur in tandem arrangements; Region: ChtBD3; cl00046" /db_xref="CDD:193627" gene complement(932398..933633) /locus_tag="B565_0851" /db_xref="GeneID:10486768" CDS complement(932398..933633) /locus_tag="B565_0851" /codon_start=1 /transl_table=11 /product="GAF sensor-containing diguanylate cyclase" /protein_id="YP_004391503.1" /db_xref="GI:330828551" /db_xref="GeneID:10486768" /translation="MPSELPSRTRLSRYDKFVRLTIYALPLAGMIWLINSLNGWQRAP LASTLLVQSYLICTFWLYRHYRYHLHRQWQHLSEALKINETTAELARNSAQYQTEEAF LEDLLRRAVMLIPGAEMGCLIKLLPGTGMLRYEAAIGMDLVKLRRINLPLEHTFQYKL TQGRCNKTLLINDLSKINATMPLSEQDRELLVNCTDLPIQATLATPIHIDGQLYGMIN MDSSKRNAFTRYDSHLMAILARDIRHAITIYQQSRRIYQLANTDQLTGLANRQQFELA LQAQPEGTLLLIDMDNLKQLNDSSGHLAGDQALRLIADGIRQHFGQGVIAARFGGDEF VLLTTLTPTELQQTMARLTAMLASASPTISCSMGMAPYRGDFAAAFARADADMYQHKR HHKELRAAQMPAIGESINH" misc_feature complement(932896..933336) /locus_tag="B565_0851" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" misc_feature complement(932515..932856) /locus_tag="B565_0851" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(932638..932640,932767..932769)) /locus_tag="B565_0851" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(932635..932646,932650..932652, 932716..932718,932728..932730,932740..932745, 932752..932754)) /locus_tag="B565_0851" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(932581..932583,932662..932664)) /locus_tag="B565_0851" /note="I-site; other site" /db_xref="CDD:143635" gene 934136..936748 /locus_tag="B565_0852" /db_xref="GeneID:10486769" CDS 934136..936748 /locus_tag="B565_0852" /codon_start=1 /transl_table=11 /product="chitinase A" /protein_id="YP_004391504.1" /db_xref="GI:330828552" /db_xref="GeneID:10486769" /translation="MLSPKPALLAMVVGTLLASSAAYAAAPGKPAIGWGPTKFAIVEV SQSATAYNELVKVKDGADVTVTWNIWNGDIGQSAKVLLDGKEVWSGPSSAAGTATFKV HKGGRYQMQVALCNGDGCTLSDAKEIVVADTDGSHLAPLKPALQENNKPYVNKSGKVV GTYYVEWGVYDRNFTVDKLPAQNLTHILYGFTPICGGDGLNDSLKEIAGSFQALQRAC AGRKDFQVAIHDPWAALQKGQGSLVAWDEPYKGNFGNLMALKQAYPDLKILPSVGGWT LSDPFFFMHDKAKRDVFVASVKEFLQTWKFFDGVDIDYEFPGGDGANPNLGDKTKDGE TYVLIMKDLRAMLDELEAETGRTYQLTSAIGAGYDKIEDVDYKAAQQYMDHLFVMSYD YNGAWSNTSLGHQANLYQATNGSANKRYNTDAAVQQLLAQGVDSGKLVIGAAAYGRGW KGVSGYQGNDPFTGTATGKIKGTWEDGVLDYRHIVNSHMGAGWEYNYDETAEAATLFK PSTGELITYDDERSVKAKGQYVLANKLGGLFSWEIDADNGDILNAMHEGLGHGEGVTP PANKPPVANAGSDVAVTGPATLTLDGSASYDPEKGSLTYSWKQVSGPQAALLDATQAK ARVVLDAVSADINLVFELTVTDDHQLTARDQVVVTNKAPQPNLPPVVTLPASVKVEEG KQVTITAKASDPNGDELIYQWQVPAGITATGQNSATLVVTGPAVDVETGYDLSVTVSD GALDANAATRLTVTPINEGGEGGSCNTTDPEAANVPAWQASKVYNGGDKVSHNQLVWQ AKYWTQGNEPSRAADQWALVSQVDLGWNAAVAYNGGDLTNHNGRQWKAKWWTQGNEPG KHDVWLDIGAASCN" misc_feature 934217..934531 /locus_tag="B565_0852" /note="Chitinase N-terminus domain. Chitinases hydrolyze the abundant natural biopolymer chitin, producing smaller chito-oligosaccharides. Chitin consists of multiple N-acetyl-D-glucosamine (NAG) residues connected via beta-1,4-glycosidic linkages and is an...; Region: Chitinase_N_term; cd02848" /db_xref="CDD:30335" misc_feature 934607..935773 /locus_tag="B565_0852" /note="Glycosyl hydrolase family 18; Region: Glyco_18; smart00636" /db_xref="CDD:128884" misc_feature 934613..935773 /locus_tag="B565_0852" /note="The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is...; Region: GH18_chitinase; cd06548" /db_xref="CDD:119365" misc_feature order(934622..934624,934706..934708,935066..935068, 935072..935074,935078..935080,935300..935302, 935306..935311,935471..935473,935756..935758) /locus_tag="B565_0852" /note="active site" /db_xref="CDD:119365" misc_feature 935849..>936433 /locus_tag="B565_0852" /note="REJ domain; Region: REJ; pfam02010" /db_xref="CDD:145278" misc_feature 936464..936586 /locus_tag="B565_0852" /note="Chitin/cellulose binding domain. Putative carbohydrate binding domain found in many different glycosyl hydrolase enzymes. May occur in tandem arrangements; Region: ChtBD3; cd00036" /db_xref="CDD:28918" misc_feature 936536..936541 /locus_tag="B565_0852" /note="chitin/cellulose binding site [chemical binding]; other site" /db_xref="CDD:28918" misc_feature 936608..936724 /locus_tag="B565_0852" /note="Chitin/cellulose binding domain. Putative carbohydrate binding domain found in many different glycosyl hydrolase enzymes. May occur in tandem arrangements; Region: ChtBD3; cd00036" /db_xref="CDD:28918" misc_feature 936677..936682 /locus_tag="B565_0852" /note="chitin/cellulose binding site [chemical binding]; other site" /db_xref="CDD:28918" gene 936780..939803 /locus_tag="B565_0853" /db_xref="GeneID:10486770" CDS 936780..939803 /locus_tag="B565_0853" /codon_start=1 /transl_table=11 /product="metalloprotease stce" /protein_id="YP_004391505.1" /db_xref="GI:330828553" /db_xref="GeneID:10486770" /translation="MPLIPGSNMNENLTMTTNVTRIAALIMATLAAGPLSAATSPLIF NDTTPQSDLAGSLAASVQFAQSQILPSYPKEGDRQPILTSLRKSLLLVQPLQADGVTP ITVDARDGSGKLLGSLTLSPPSALPETVYHLAGVPEGGVSFIPESGTTAVISSSAELA KLSDKSGAFLKERLTGRALVEIQTADGRWVRDIYLPVSPELEGKMVRIRSSAGYNSTA FYGERQVTVSRGQTLQFKFANGQWFREGELENNRITYAADTWSGELPAEWIQPGLNLS VRQGNLSGELRDIKVGAPGELLLHTIDIGMLTPPRDRFAFANDKEAHREYFQTIPASR MIVSQYAPLSLPEVMLPNGTLLTDFDPSEGGWHGGTMRQRIGKELISHGIDNANYGIN SSAGEGEGSHPFVVAQLTAHNSRGKYANGVQVHGGSGGGGIVTLDDSLGNEFSHEVGH NFGLGHYVDGFRGSVHRSADQLNSSWGWDSDKHRFIPNFSPTRTNEDACLDGQCQPPF DGRKFGHDAMAGGRPLSGANRFTLYTPNSAAIIQRFLESKAVFDANSATGFSKWNSAM ARMEPYQHTIEGIEKVEAPMDALNEAGLSALLADYGLVRVAMWDGRWTRDIRVPVASA ENRGRSLTIDHGAGYNSRLFINGKEIVVNRGFKKSFTSDGQSWVEVSPIDTKVARKPE QFGVPVTTLVGYYDPQGALRSYIYPALHGAYGFTYPDDRNTLSGNDCQLQVETRDGLQ RFRLANHRVSSSVMNKFHINLPTASEPGRATIQCRGQTLVQQSLLPPQQTLSFTVNGR LLEQGVVENQPPVVTVPAQLGGIGGEWLTITAEARDPEGDALSYRWHFPMGWQVEGET SANLRLLPPAVTTSEQHELSVSVSDGVHQSEGRIVLTLDPVVDGSCNTTDPEAANVPA WQASKVYNGGDKVSQNQLVWRAKYWTQGNEPSRAADQWALASQVELGWSATVAYNGGE LTNHNGRQWKAKWWTQGNEPGKHDVWLDVGAASCP" misc_feature 937524..938429 /locus_tag="B565_0853" /note="Peptidase M66; Region: Peptidase_M66; pfam10462" /db_xref="CDD:192595" misc_feature 939519..939641 /locus_tag="B565_0853" /note="Chitin/cellulose binding domain. Putative carbohydrate binding domain found in many different glycosyl hydrolase enzymes. May occur in tandem arrangements; Region: ChtBD3; cd00036" /db_xref="CDD:28918" misc_feature 939591..939596 /locus_tag="B565_0853" /note="chitin/cellulose binding site [chemical binding]; other site" /db_xref="CDD:28918" misc_feature 939663..939779 /locus_tag="B565_0853" /note="Chitin/cellulose binding domain. Putative carbohydrate binding domain found in many different glycosyl hydrolase enzymes. May occur in tandem arrangements; Region: ChtBD3; cd00036" /db_xref="CDD:28918" misc_feature 939732..939737 /locus_tag="B565_0853" /note="chitin/cellulose binding site [chemical binding]; other site" /db_xref="CDD:28918" gene 939883..941799 /locus_tag="B565_0854" /db_xref="GeneID:10486771" CDS 939883..941799 /locus_tag="B565_0854" /codon_start=1 /transl_table=11 /product="chitinase" /protein_id="YP_004391506.1" /db_xref="GI:330828554" /db_xref="GeneID:10486771" /translation="MKKNRITLLLAGMMLSGHLWAAEAYDINKSYPGGSQVNYNGQVF EAKWWVNPGQTPGMAAANEWDTPWKLVGEGEVAPPDTGGDDKPNPPTPTPPDGSTTPV YMSQAELDAKEKALTDFPAMEAVKASIATRDNLVVEAVQPGRADNPGNVKRVESLLSE GQFNYLFPLRAPEYTYRGLLQAAAKFPALCSDYSDGRDADAICRKTLATMFAHFAQET GGHENWRPEAEWRQALVYVREMGWNETMRGGYNAECRPDVWQGQQWPCGTFDNGEFKS YFGRGAKQLSYNYNYGPFSEAMFGTVRTLLDRPDLVADTWLNLASAVFFYTYPQPPKP SMLHVIDGTWQPNDHDKQNGLVPGFGVTTQIINGGVECGGPVEHAQSQNRINYYREFA NYLGVAVPSDEVLGCKNMKVFDDNGAGALPIYWEQDWSYVAGNPNGGKSYACKLVGYQ TRFSAFKAGDYSRCVQHFYPEVVIEDNGGGTNLPPVANITGPAQAEGGSKVTLSGQHS SDPEGKPLSYAWTIPAGASAPALDQVTLELTLPKPASDTKLEIKLTVTDEGSLSRSAT HSLLVKGEEGGVTPPDYPAYKEGTPYKAGERVSNGGVSYECKPHPYTGWCAGAAWAYE PGKGTAWADAWIKL" misc_feature 939946..940074 /locus_tag="B565_0854" /note="Chitin/cellulose binding domain. Putative carbohydrate binding domain found in many different glycosyl hydrolase enzymes. May occur in tandem arrangements; Region: ChtBD3; cl00046" /db_xref="CDD:193627" misc_feature 940195..940758 /locus_tag="B565_0854" /note="Uncharacterized protein contain chitin-binding domain type 3 [General function prediction only]; Region: COG3979" /db_xref="CDD:33759" misc_feature 940330..941103 /locus_tag="B565_0854" /note="Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but...; Region: chitinase_glyco_hydro_19; cd00325" /db_xref="CDD:29557" misc_feature order(940531..940533,940597..940599,940732..940734, 940747..940752,940981..940983,941020..941022) /locus_tag="B565_0854" /note="putative sugar binding site [chemical binding]; other site" /db_xref="CDD:29557" misc_feature order(940531..940533,940597..940599,940738..940740) /locus_tag="B565_0854" /note="catalytic residues [active]" /db_xref="CDD:29557" misc_feature 941341..941598 /locus_tag="B565_0854" /note="Putative Ig domain; Region: He_PIG; cl09256" /db_xref="CDD:158466" misc_feature 941629..>941724 /locus_tag="B565_0854" /note="Chitin/cellulose binding domain. Putative carbohydrate binding domain found in many different glycosyl hydrolase enzymes. May occur in tandem arrangements; Region: ChtBD3; cl00046" /db_xref="CDD:193627" gene complement(942020..942139) /locus_tag="B565_0855" /db_xref="GeneID:10486772" CDS complement(942020..942139) /locus_tag="B565_0855" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391507.1" /db_xref="GI:330828555" /db_xref="GeneID:10486772" /translation="MFENLAVLFHLRGATTKNGVVEKDAYAPSTREYYFRYGK" gene 942588..942663 /locus_tag="B565_t022" /db_xref="GeneID:10486773" tRNA 942588..942663 /locus_tag="B565_t022" /product="tRNA-Ala" /db_xref="GeneID:10486773" gene 942692..942767 /locus_tag="B565_t023" /db_xref="GeneID:10490007" tRNA 942692..942767 /locus_tag="B565_t023" /product="tRNA-Ala" /db_xref="GeneID:10490007" gene 942833..942908 /locus_tag="B565_t024" /db_xref="GeneID:10490008" tRNA 942833..942908 /locus_tag="B565_t024" /product="tRNA-Ala" /db_xref="GeneID:10490008" gene 942957..943032 /locus_tag="B565_t025" /db_xref="GeneID:10490009" tRNA 942957..943032 /locus_tag="B565_t025" /product="tRNA-Ala" /db_xref="GeneID:10490009" gene 943067..943142 /locus_tag="B565_t026" /db_xref="GeneID:10490010" tRNA 943067..943142 /locus_tag="B565_t026" /product="tRNA-Ala" /db_xref="GeneID:10490010" gene complement(943313..945502) /locus_tag="B565_0856" /db_xref="GeneID:10490011" CDS complement(943313..945502) /locus_tag="B565_0856" /codon_start=1 /transl_table=11 /product="putative extracellular nuclease" /protein_id="YP_004391508.1" /db_xref="GI:330828556" /db_xref="GeneID:10490011" /translation="MKGTRTLLSLAVGLALASSGAHAAFVCPSDPAQLTPIPTIQGTG SASALATQTVTDKNGNVTGKISTGTFNVRGIVTTLGQSLTKGFYLTDPVGDGNPATSD GIFVYLNDKDFATKYKDVKPGSKVCLEAQVQEFYGGTQLTPLVDKATKKAHLQVTAQG LNVPTSVLQVNEGETLAQALNRHEGMRVRLDSSSDLHLTRNYGFDYKVYRNNVELAHK TPLIKPTQLHVANSADAVALATKNGSNRLVVESDYKAPDGVLPWFPSWDADQGYLRIG DQLTGLEGVLVYNKDAFRLVVPSDVTLTAGALLRNPEEDRQDAPARLAGSDLRIGSFN VLNYFTSHSSIGGALNILCKDQADADNAKGCNRGAKSQPEFEKQRTKIINAITAMDAD LLGLMEMENNGFEDNSALHNLVTRLNEQQKDASKHYAYVRLPVTALTDGKFFGGDAIM VAMLYRPALLTPSGDASVIKLPEQRYTTGGVAKTAGQRDSLVQTFTLAKSKEPLTLVV NHLKSKGSGCYENGDGKTEPADLQGKCTEFRVSAAKVLGEAVSKLPGQVLLVGDFNSY AKEDPIRVLTDYNPATSERKIVSASHTFIGDHSYEQLGREVTRSYGLIDLNVKFNKEK AISYSYDGELGTLDYALANPALASKVAGVADWHINSFESSLFEYGSQYTGSLLKSDNP FSASDHDPIIVDLRLESDATKPDSSSGGGALGFGLLALLPLAWRRRR" misc_feature complement(945074..945292) /locus_tag="B565_0856" /note="YhcR_OBF_like: A subfamily of OB-fold domains similar to the OB folds of Bacillus subtilis YhcR. YhcR is a sugar-nonspecific nuclease, which is active in the presence of Ca2+ and Mn2+. It cleaves RNA endonucleolytically, producing 3'-monophosphate...; Region: YhcR_OBF_like; cd04486" /db_xref="CDD:72958" misc_feature complement(order(945116..945118,945122..945124, 945128..945130,945290..945292)) /locus_tag="B565_0856" /note="generic binding surface II; other site" /db_xref="CDD:72958" misc_feature complement(order(945077..945085,945104..945112, 945131..945133,945203..945205,945209..945217, 945230..945232,945236..945247,945269..945277)) /locus_tag="B565_0856" /note="generic binding surface I; other site" /db_xref="CDD:72958" misc_feature complement(943418..944521) /locus_tag="B565_0856" /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; Region: EEP; cl00490" /db_xref="CDD:197411" misc_feature complement(order(943439..943444,943589..943591, 943811..943813,943817..943819,943973..943975, 944309..944311,944501..944503)) /locus_tag="B565_0856" /note="putative catalytic site [active]" /db_xref="CDD:197306" misc_feature complement(order(943442..943444,944309..944311)) /locus_tag="B565_0856" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:197306" misc_feature complement(order(943439..943441,943811..943813, 943973..943975)) /locus_tag="B565_0856" /note="putative phosphate binding site [ion binding]; other site" /db_xref="CDD:197306" gene 945995..949024 /locus_tag="B565_0857" /db_xref="GeneID:10486774" CDS 945995..949024 /locus_tag="B565_0857" /codon_start=1 /transl_table=11 /product="chitinase" /protein_id="YP_004391509.1" /db_xref="GI:330828557" /db_xref="GeneID:10486774" /translation="MQQLFRPSRLAMLVALAAAPAWAQAAYPAYKSGTAYKAGDIVSN VGALYECKEFPYSGWCGASPYHYEPGVGVVWADAWKPYGGEVPPPALGVAVSSPATGS SFNEGASVALAVTLSGPVTALARVEYLVDGKLVATASASPWSASWSAAGVGAHTLKAR ALDKDGKVLSEADSSFNVAAVVAPEAPKASISSPANGAKVTLGRSVAVSGNVTDANND VAKVELYVDGKKVGEDTTAPWQVNWTPDAKGSAALKLVATDKTNLSGESAAVTVNVEE AALPPTGGNLSCDIRQVYRPDGYECMGDDHARRVIGYFTSWRTGKNGLPAYLVSDIPW NKITHINYAFAAVDEQSHTIKVDDAATKMTWDGVPGAEMDPEFAYKGHFNLLSKYKKQ YPDVKTLISVGGWADTRGFYTATTKGDCSVNTAGINTLADSAVSFIRQYGFDGVDIDY EYPTSMKDAGNPNDFPLSNQCRAKLFANYEVLMKTLRARLDNAGNEDGRKYMLTIASP ASAYLLRGMENFQVTQYLDYVNLMTYDFHGAWNHFVGHNAALFDNNADPELSHWGVYT QTQFGGIGYLNAAWSAHYFRGALVAGKINVGVPYYTRGWQGVSGGSHGLGGKAALPSQ NECQPGTGGSTIPCGNGAVGIDNIWHDLDKNGKEIGGGAVPMWHAKNLENAASLGITT LPSYGTAWGLDPNNPAHVIQGKYVRYYDDKAHAPWLWNEEKKVFLSTEDEESMGHKLD YIIKRGLGGVMFWEMAGDYAFDPAKNEYGIGSTLTTLAYEKFAKATPYNTKQNDLAAP SAQLDIQVSLSGFKEGDSNYPINPKLKLVNKSTQTIPGGARIEFLVPTSTSDTITDQS GMGLKVVESGGNDNSEGIANEKDFHKVAMNLPGWQTLAPGAEIEVAMTYYLPAAGVPS GMRIISGSQTIGLKAEFPTLPEAVLGSGGGENPGTSCSSQNVNPAAYKAYPSWPQGDH ANGGDRITHNKVVWQANWWTSSEPKATDGSWKSVCSY" misc_feature <946094..946234 /locus_tag="B565_0857" /note="N-acetylglucosamine-binding protein A; Reviewed; Region: PRK13211" /db_xref="CDD:183898" misc_feature 946565..946810 /locus_tag="B565_0857" /note="Penicillin-Binding Protein C-terminus Family; Region: BiPBP_C; pfam06832" /db_xref="CDD:148440" misc_feature 946865..948271 /locus_tag="B565_0857" /note="Chitinase [Carbohydrate transport and metabolism]; Region: ChiA; COG3325" /db_xref="CDD:33134" misc_feature 946922..947803 /locus_tag="B565_0857" /note="The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is...; Region: GH18_chitinase; cd06548" /db_xref="CDD:119365" misc_feature order(946931..946933,947024..947026,947333..947335, 947339..947341,947345..947347,947588..947590, 947594..947599,947795..947797) /locus_tag="B565_0857" /note="active site" /db_xref="CDD:119365" misc_feature <948026..948268 /locus_tag="B565_0857" /note="The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have...; Region: GH18_chitinase-like; cl10447" /db_xref="CDD:195961" misc_feature 948293..948826 /locus_tag="B565_0857" /note="Chitinase C; Region: ChiC; pfam06483" /db_xref="CDD:148222" misc_feature 948893..949009 /locus_tag="B565_0857" /note="Chitin/cellulose binding domain. Putative carbohydrate binding domain found in many different glycosyl hydrolase enzymes. May occur in tandem arrangements; Region: ChtBD3; cd00036" /db_xref="CDD:28918" misc_feature 948962..948967 /locus_tag="B565_0857" /note="chitin/cellulose binding site [chemical binding]; other site" /db_xref="CDD:28918" gene 949164..950108 /locus_tag="B565_0858" /db_xref="GeneID:10486775" CDS 949164..950108 /locus_tag="B565_0858" /codon_start=1 /transl_table=11 /product="CheY-like receiver" /protein_id="YP_004391510.1" /db_xref="GI:330828558" /db_xref="GeneID:10486775" /translation="MASILDSVDQRTQLVGENRLELLMFRLGTRQMFAINVFKVREVV KLPHLSKMPGSHHNISGVANIRGTSIPVINLRSAIGMRPMPIDSESNLIITEYNRTIQ GFLVGQVANIVNMTWKDILPPPRSAGRANYLTAITRIPEDGVDQIVEIIDVEKVLAEI ITYDIRISEEVLDREILPEMHGRKVLIVDDSSTARNLVRETLGQLGLEVIECQDGLQA LTLLKGWCDAGKKVTDEILLMITDAEMPEMDGYRLTHEVRSDPRMSDLFITLNTSLSG NFNEAMVKKVGCDRFISKFQPDLLVGVAQERLRQVLES" misc_feature 949218..949643 /locus_tag="B565_0858" /note="CheW-like domain. CheW proteins are part of the chemotaxis signalling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and...; Region: CheW_like; cl00256" /db_xref="CDD:185867" misc_feature 949695..950093 /locus_tag="B565_0858" /note="FOG: CheY-like receiver [Signal transduction mechanisms]; Region: CheY; COG0784" /db_xref="CDD:31127" misc_feature 949719..950099 /locus_tag="B565_0858" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(949728..949733,949887..949889,949911..949913, 949977..949979,950034..950036,950043..950045) /locus_tag="B565_0858" /note="active site" /db_xref="CDD:29071" misc_feature 949887..949889 /locus_tag="B565_0858" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(949896..949901,949905..949913) /locus_tag="B565_0858" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature order(950043..950045,950046..950048) /locus_tag="B565_0858" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" gene complement(950291..950902) /locus_tag="B565_0859" /db_xref="GeneID:10486776" CDS complement(950291..950902) /locus_tag="B565_0859" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase I" /protein_id="YP_004391511.1" /db_xref="GI:330828559" /db_xref="GeneID:10486776" /translation="MVRILFALFVGLGSLLSSAQAQTLLVLGDSLSAGYQMQVEQSWP ALLNQKWQEEGGKHTLLNASISGETTQGALARLPALLKEHKPDWLLIELGGNDGLRGF APTITRQNLASMIALAKEQQTRVVLTQIQLPRNYGARYLRQFEQIFPELAQANDLPLL PFFMDDIALRPELMMNDGIHPTPAAQPQIRDKVARFMEPLLSQ" misc_feature complement(950309..950821) /locus_tag="B565_0859" /note="Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity; Region: Lysophospholipase_L1_like; cd01822" /db_xref="CDD:58499" misc_feature complement(order(950363..950365,950372..950374, 950615..950617,950702..950704,950813..950815)) /locus_tag="B565_0859" /note="active site" /db_xref="CDD:58499" misc_feature complement(order(950363..950365,950372..950374, 950813..950815)) /locus_tag="B565_0859" /note="catalytic triad [active]" /db_xref="CDD:58499" misc_feature complement(order(950615..950617,950702..950704, 950813..950815)) /locus_tag="B565_0859" /note="oxyanion hole [active]" /db_xref="CDD:58499" misc_feature complement(950594..950611) /locus_tag="B565_0859" /note="switch loop; other site" /db_xref="CDD:58499" gene 950959..951654 /locus_tag="B565_0860" /db_xref="GeneID:10486777" CDS 950959..951654 /locus_tag="B565_0860" /codon_start=1 /transl_table=11 /product="putative ABC-type transport system ATPase component" /protein_id="YP_004391512.1" /db_xref="GI:330828560" /db_xref="GeneID:10486777" /translation="MSSTPIIVVKGLGKSVRLGQESLTILEGIDLQVNSGETVALVGA SGSGKSTLLGLLAGLDLPSQGDIEILGKSLGELDEEGRARLRAEQIGFVFQSFLLLPT MTALENVMLPAELRGERDCEPRARELLAAVGLGERLHHLPPRLSGGEQQRVAIARAFM TRPSLLLADEPTGNLDSKTGEKVIELLFELNRKHGTTLVVVTHDHQLAERCQRQVVMT AGRLEREVAHDVV" misc_feature 950959..951636 /locus_tag="B565_0860" /note="Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]; Region: COG4181" /db_xref="CDD:33919" misc_feature 950977..951624 /locus_tag="B565_0860" /note="This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together...; Region: ABC_MJ0796_Lo1CDE_FtsE; cd03255" /db_xref="CDD:73014" misc_feature 951085..951108 /locus_tag="B565_0860" /note="Walker A/P-loop; other site" /db_xref="CDD:73014" misc_feature order(951094..951099,951103..951111,951241..951243, 951463..951468,951565..951567) /locus_tag="B565_0860" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73014" misc_feature 951232..951243 /locus_tag="B565_0860" /note="Q-loop/lid; other site" /db_xref="CDD:73014" misc_feature 951391..951420 /locus_tag="B565_0860" /note="ABC transporter signature motif; other site" /db_xref="CDD:73014" misc_feature 951451..951468 /locus_tag="B565_0860" /note="Walker B; other site" /db_xref="CDD:73014" misc_feature 951475..951486 /locus_tag="B565_0860" /note="D-loop; other site" /db_xref="CDD:73014" misc_feature 951553..951573 /locus_tag="B565_0860" /note="H-loop/switch region; other site" /db_xref="CDD:73014" gene 951691..954138 /locus_tag="B565_0861" /db_xref="GeneID:10486778" CDS 951691..954138 /locus_tag="B565_0861" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="YP_004391513.1" /db_xref="GI:330828561" /db_xref="GeneID:10486778" /translation="MMQWRLGWRLLRREGFSGELRWFVLALALSVACVLSVALVADRL DAGLKASGRDFIGADRVLRTAAALPDGWLERAKQDGLAVQTTVSFNSMLFHGDALQLA SIRAVPDGFPFYGKLTLEPARAPAPGEIWLSARVMQLLKAKTGDELEVGNTVLKVAGL LGEEPDQGFSPFLLAPRALIHTADIEATGALLPGSRQQWRYLFKGPREALARYEQWLL PQLQAGQKWIKPDDSESQVGRSLANAERFFRLASLSGVLLGALAMGIAVRHFAERQTN MVALLKTLGASRRSLWQLMGTLLLSLTLIGALLGLVAGTAMQWITLQLLGDLLPPDLP PPSWRPFALGVAVALFITLLLAFVPFLRLLKVPPLRVLRRELEAGIPPWLALPVGLFG LFALVWGFTADVRLALGLVGGMGLLMGLLALLAALMLRLGARVSGPHALRLALAHLSR ERSSGLFQLAGFALALMLFGLLWAARVDLLDEFSARLPVDAPNRFLVNVAENEREGIL SELAAAGATTSDFYPMVRGRLTHIAGEAVGEGASSGREGVDRELNFTTTATLPIDNKL VAGKWLAGPGEVSVDSELAKRLDIKLGDMLAFTIEGRSFGARVTSLRSIKWDNMRPNF YMIFSEDLLAPFSRTWLGSYRLPEAGRTAEVELIRRHPTVSLIDVDDLIARLTQVSEQ VSRALALMLGLVTVAALLVLLTQTQASMAQRRRELLLMRTLGASSDLLKKMLRWELVA SGALAGLCAAMVVELCSFGLQWWWFEGQWQFHWAIWLGLPTLGALLVTLAGQGMQRQL LAGTLSDRLRGLGQGLL" misc_feature 951814..>952557 /locus_tag="B565_0861" /note="Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]; Region: COG3127" /db_xref="CDD:32941" misc_feature <953116..954063 /locus_tag="B565_0861" /note="Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]; Region: COG3127" /db_xref="CDD:32941" misc_feature 953815..954063 /locus_tag="B565_0861" /note="FtsX-like permease family; Region: FtsX; pfam02687" /db_xref="CDD:190390" gene complement(954266..955171) /locus_tag="B565_0862" /db_xref="GeneID:10486779" CDS complement(954266..955171) /locus_tag="B565_0862" /codon_start=1 /transl_table=11 /product="putative nucleoside-diphosphate sugar epimerase" /protein_id="YP_004391514.1" /db_xref="GI:330828562" /db_xref="GeneID:10486779" /translation="MKILITGGTGFIGRKLVAHLKVNHEVVVLSRQGSRAYSLLGHDI KVLDNLDRLDDLNDVDAVINLAGEPIAAGRWSESRKQLLCDSRWLLTEQLVDLIKLSS TPPKVLINASAIGWYGRQGTETLDEQCRSPNDEFTHQLCQQWETLAQEAQSRQTRVCI VRIGLVLGMDGGALPKMLPPYRLGLGGPMGSGSQMMSWIHVQDLVRAMLFLLDHKECS GIFNGTAPHPVSNREFSQTLATTLHRPHLFFVPAPLLQLVMGEAADLLLTGQKVIPAR LQQAGFHFSYPELPSALTNLLREPR" misc_feature complement(954281..955168) /locus_tag="B565_0862" /note="atypical (a) SDRs, subgroup 8; Region: SDR_a8; cd05242" /db_xref="CDD:187553" misc_feature complement(954293..955165) /locus_tag="B565_0862" /note="TIGR01777 family protein; Region: yfcH" /db_xref="CDD:188166" misc_feature complement(order(954674..954685,954749..954751, 954761..954763,954833..954841,954914..954916, 954971..954979,955076..955084,955136..955147, 955151..955153)) /locus_tag="B565_0862" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187553" misc_feature complement(order(954749..954751,954761..954763, 954836..954838,954911..954913)) /locus_tag="B565_0862" /note="putative active site [active]" /db_xref="CDD:187553" gene 955472..956953 /locus_tag="B565_0863" /db_xref="GeneID:10486780" CDS 955472..956953 /locus_tag="B565_0863" /codon_start=1 /transl_table=11 /product="Cyclic di-GMP phosphodiesterase YahA" /protein_id="YP_004391515.1" /db_xref="GI:330828563" /db_xref="GeneID:10486780" /translation="MALLMGGGILLLGVVAVIWQTVTETERDADSRLQHARVMFERSI GHARQAAINVKGMLGHSCKEAAQLLREQVATVPYVRSANLAVGSHIYCTSLYGDYDGP FNPDRYVDGRLQLLPGNEVTPDRPLIVLRHETDKGSVLIGVDGYYLRNTLEISSKNSP MALVVGQRALFGSGQVGAAPSPTEEGYIALASADFPYQVVTRVTVHDYWSHAWRYSRY TLILSPLLALLIGFGTFRLMGRSSSPAEELKRALIEEEFIPYLQPVVSGEDEQWRGCE VLMRWQHPKQGMISPDRFIPLAEDSGLIVPMTSLLMAQVRDHFSPYARKLPAKFHFCF NISAKHFQDLDLLADCKAFLDAFKDNPVDLGLELTERELLVADETTAQMFAELRKLGV LISIDDFGTGHSSLTYLQQFQVDALKIDRSFVEMIGTDALSSHIVENVIDLAKRLELI LIAEGVEKQSQADYLRARHVDYLQGYRYSRPIPMKQFCKTLFG" misc_feature 955529..956944 /locus_tag="B565_0863" /note="Predicted signal transduction protein containing sensor and EAL domains [Signal transduction mechanisms]; Region: COG4943" /db_xref="CDD:34551" misc_feature 955541..956128 /locus_tag="B565_0863" /note="CSS motif domain associated with EAL; Region: CSS-motif; pfam12792" /db_xref="CDD:193268" misc_feature 956207..956920 /locus_tag="B565_0863" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:30163" gene complement(957028..958209) /locus_tag="B565_0864" /db_xref="GeneID:10486781" CDS complement(957028..958209) /locus_tag="B565_0864" /codon_start=1 /transl_table=11 /product="class I and II aminotransferase" /protein_id="YP_004391516.1" /db_xref="GI:330828564" /db_xref="GeneID:10486781" /translation="MQPFFAQRFEKVEPSFIREILKVAANPEIISFAGGLPNPHLFPV KAIDQACQDVLREQGAAALQYAATEGFAPLRQYIADRYLARHGMQVNPDNILITSGSQ QALDLLGKVLIDEGQDLIIEEPGYLGAIQAFSVYQPTFKPITLGEAGLDLAALDALLA SGSNAKLLYGVPNFQNPSGVSYSRANREALAERLVRHELLMVEDDPYGELRFEGEHMP PIAKLAPNNTVLLGSFSKTVVPAFRLGWMVMPDWLRKKVTIAKQATDLHSNAFSQQVL HRFLTDNSLDAHLEKIKEVYGRQRAAMEAALARHCPPGVSYTRPEGGMFLWLTLPAHI SAMALFDEAIKEKVAFVPGAPFYVRPEIKNTLRLSFSCVDEATIEEGVKRLARALQRM L" misc_feature complement(957034..958200) /locus_tag="B565_0864" /note="aspartate aminotransferase; Provisional; Region: PRK08361" /db_xref="CDD:169403" misc_feature complement(957049..958122) /locus_tag="B565_0864" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature complement(order(957481..957483,957502..957507, 957511..957513,957589..957591,957682..957684, 957832..957834,957904..957912)) /locus_tag="B565_0864" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(957385..957387,957394..957396, 957481..957489,957610..957612,957802..957804, 957901..957903)) /locus_tag="B565_0864" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(957502..957504) /locus_tag="B565_0864" /note="catalytic residue [active]" /db_xref="CDD:99734" gene 958291..958548 /locus_tag="B565_0865" /db_xref="GeneID:10486782" CDS 958291..958548 /locus_tag="B565_0865" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391517.1" /db_xref="GI:330828565" /db_xref="GeneID:10486782" /translation="MIVTKIAKKGLERLCCGLYWTVSRYGDASEGAGKWMAGIFVARN TCALGLSWDNSLPCFRGSMKCRAASGPARDRTQDVLPGLMK" gene 958559..959272 /locus_tag="B565_0866" /db_xref="GeneID:10486783" CDS 958559..959272 /locus_tag="B565_0866" /codon_start=1 /transl_table=11 /product="tRNA (guanine-N(7)-)-methyltransferase" /protein_id="YP_004391518.1" /db_xref="GI:330828566" /db_xref="GeneID:10486783" /translation="MPVTQDVFNEDGKFMRKIRSFVRREGRLTKGQEKALEELWPVMG IDFEPKQLDLVALFGREAPVVLEIGFGMGASLVEMAKNAPEKNFIGIEVHSPGVGACL GTAQEAGVTNLKVICHDAVEVLEHMIPNGSLSCLQLFFPDPWHKSRHHKRRIVQPAFA QDIRQKLAIGGVFHMATDWENYAEHMLEVMSAAEGYENTSATGNWVPRPDWRPLTKFE QRGHRLGHGVWDLIFKRVS" misc_feature 958610..959230 /locus_tag="B565_0866" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene 959321..959653 /locus_tag="B565_0867" /db_xref="GeneID:10486784" CDS 959321..959653 /locus_tag="B565_0867" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391519.1" /db_xref="GI:330828567" /db_xref="GeneID:10486784" /translation="MANRSRRLRKKLRVDEFQEMGFDISFNFPVGTAEETIDAVVDAM IDEVVEPRKLAFAGSGHLAWEGMICTQQLGKCTEEDRAAVKSWLEGKGMEAVVVTELF DLWYGEPA" misc_feature 959321..959641 /locus_tag="B565_0867" /note="Protein with unknown function (DUF469); Region: DUF469; cl01237" /db_xref="CDD:186395" gene 959776..960696 /locus_tag="B565_0868" /db_xref="GeneID:10486785" CDS 959776..960696 /locus_tag="B565_0868" /codon_start=1 /transl_table=11 /product="glutaminase superfamily" /protein_id="YP_004391520.1" /db_xref="GI:330828568" /db_xref="GeneID:10486785" /translation="MVLSSELLASILEEVRPLLGQGKVADYIPALAQVPADRLGIAVC TVEGELFTAGDAFEPFSIQSISKALSLTLALTLYQEEEIWARVGKEPSGQPFNSLVQL EFEQGIPRNPFINAGALVVSDLLETRLTAPRQRTLELVRRLSGNPAIMADQVVARSEY QHSARNAAIAYLMKAYGNFENEVDKVLQSYFNACAIRMSCVDLARAFIYLANRGVPLG ESVPLLPARTTKQVNALLATCGLYDEAGDFAYRVGMPGKSGVGGGIIALIPGELCVCV WSPELNKAGNSLAGTAALELLAERLGRSIF" misc_feature 959818..960693 /locus_tag="B565_0868" /note="Glutaminase; Region: Glutaminase; cl00907" /db_xref="CDD:193972" gene 960708..962021 /locus_tag="B565_0869" /db_xref="GeneID:10486786" CDS 960708..962021 /locus_tag="B565_0869" /codon_start=1 /transl_table=11 /product="thiosulfate sulfur transferase" /protein_id="YP_004391521.1" /db_xref="GI:330828569" /db_xref="GeneID:10486786" /translation="MNREITMKRHLRFLQAALATLLLWCALPAVAGELPPLSLADAKA KQAVILDTRASYFYQGWPMEGEKQGGHVAGAENLSAEWKYSDEEWPKALEIKGLKAER PVALYGASREVAEVARLLRKQGIKQLFELQGWQAAPRESLARWQQLVYPRWLADLQEG KPVAAAPKGDWKLFEVDWGSPKAYLISHIPGAGYIDTNSLEEEPLWNKVSDEALKKLL LDNGIRHDTTVILYGRNTMAAARAAHLMMYAGVEDVRLLDGGLDAWFIQHLRTETGLP NKYEPVKEFGVAIPAHPEYYTTLSQAKELLKKPDSALVSVRTWDEFVGNTSGYSYIKP KGDIPGAKWGHGGVDANSMSDFHNPDGTMKPAREILAMWDQWNIEPTQQAAFYCGTGW RASEAFFYAWLMDWKQISVYDGGWYEWSSDPKNPTVTGERQPAKS" misc_feature 960834..961127 /locus_tag="B565_0869" /note="Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins...; Region: RHOD; cl00125" /db_xref="CDD:193666" misc_feature 961143..962003 /locus_tag="B565_0869" /note="Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]; Region: SseA; COG2897" /db_xref="CDD:32722" misc_feature 961149..961499 /locus_tag="B565_0869" /note="Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins...; Region: RHOD; cl00125" /db_xref="CDD:193666" misc_feature 961404..961406 /locus_tag="B565_0869" /note="active site residue [active]" /db_xref="CDD:29073" misc_feature 961599..961970 /locus_tag="B565_0869" /note="Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue; Region: TST_Repeat_2; cd01449" /db_xref="CDD:29080" misc_feature 961869..961871 /locus_tag="B565_0869" /note="active site residue [active]" /db_xref="CDD:29080" gene 962204..962434 /locus_tag="B565_0870" /db_xref="GeneID:10486787" CDS 962204..962434 /locus_tag="B565_0870" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391522.1" /db_xref="GI:330828570" /db_xref="GeneID:10486787" /translation="MIAEEAAMKKLMMILVCALGLVACSSQYIMSTKDGKMITTESKP KLDESTGMYRYYDHEGREVMIKKDDVTQIMER" misc_feature 962282..962431 /locus_tag="B565_0870" /note="Bacterial protein of unknown function (DUF903); Region: DUF903; pfam06004" /db_xref="CDD:147908" gene 962611..963003 /locus_tag="B565_0871" /db_xref="GeneID:10486788" CDS 962611..963003 /locus_tag="B565_0871" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391523.1" /db_xref="GI:330828571" /db_xref="GeneID:10486788" /translation="MSIWNSRFSARSLLGGALLVVASASHAGDDQFTLGRTILLGAGD HGATIPLVVCRQTKYIKVKAERDLTLDRVVVTYGGDRTKTIRFDREMSSDKETEWKSL GSRRCVKKIEVYGNSERSKAGVKVFGRK" misc_feature <962752..962994 /locus_tag="B565_0871" /note="Protein of unknown function (DUF2541); Region: DUF2541; cl08090" /db_xref="CDD:186762" gene complement(963087..963617) /locus_tag="B565_0872" /db_xref="GeneID:10486789" CDS complement(963087..963617) /locus_tag="B565_0872" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein Mog" /protein_id="YP_004391524.1" /db_xref="GI:330828572" /db_xref="GeneID:10486789" /translation="MSKAKIGIVTVSDRASAGIYEDLSGKAIIDTLNAYLTSEWEPVY QVIPDEQDQIEATLIRLADEEQCCLIVTTGGTGPAKRDVTPEATEAVCDRMMPGFGEL MRAESLKFVPTAILSRQTAGLRDDTLIVNLPGKPKSIRECLDAVFPAIPYCIDLMEGP YLECDETVIKPFRPKK" misc_feature complement(963147..963605) /locus_tag="B565_0872" /note="MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea...; Region: MogA_MoaB; cd00886" /db_xref="CDD:58167" misc_feature complement(order(963195..963197,963204..963206, 963216..963221,963297..963299,963387..963395)) /locus_tag="B565_0872" /note="MPT binding site; other site" /db_xref="CDD:58167" misc_feature complement(order(963147..963149,963264..963266, 963273..963275,963303..963308,963315..963317, 963330..963338,963360..963362,963372..963374, 963378..963383,963387..963389)) /locus_tag="B565_0872" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:58167" gene 964011..964346 /locus_tag="B565_0873" /db_xref="GeneID:10486790" CDS 964011..964346 /locus_tag="B565_0873" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391525.1" /db_xref="GI:330828573" /db_xref="GeneID:10486790" /translation="MELPDFDTLKELAASEPSRLDAILEQQIDQLMARASPDQQRRLR GLQFKIDGQRRLAKNNLDSCIRITNMMRESFYVMRSEMSQFREQGDPPPESDGSGKII RLADYRRRK" misc_feature 964011..964259 /locus_tag="B565_0873" /note="Protein of unknown function (DUF3135); Region: DUF3135; pfam11333" /db_xref="CDD:151774" gene 964606..965379 /locus_tag="B565_0874" /db_xref="GeneID:10486791" CDS 964606..965379 /locus_tag="B565_0874" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391526.1" /db_xref="GI:330828574" /db_xref="GeneID:10486791" /translation="MLSREQQTEITRIIVKVGQMLAQFGAESRIIEQTTVRLGMALGL ESVEMAISSSAIVLTSLYQGGCVTTTRRVREHGINMQVVCEIQRICIMAEKELIGARE VRQRLEAIVPFHYHPWLVVPMVGLSCGAFSLLFGGDWPIFLVTCFSSAVAMRVRQLMA RHHHSPLINFAATGFIATLLSSSATFFNWGDQPYLAMAASVLLLVPGFPLINAVSDMV KGYFNMGLARWGTATLLTISAAIGIILAMSVTGIWGWKV" misc_feature 964612..965331 /locus_tag="B565_0874" /note="Uncharacterized conserved protein [Function unknown]; Region: COG2966" /db_xref="CDD:32786" misc_feature 964654..965226 /locus_tag="B565_0874" /note="Protein of unknown function (DUF1212); Region: DUF1212; cl01118" /db_xref="CDD:194040" gene 965379..965843 /locus_tag="B565_0875" /db_xref="GeneID:10486792" CDS 965379..965843 /locus_tag="B565_0875" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391527.1" /db_xref="GI:330828575" /db_xref="GeneID:10486792" /translation="MDLLWLLAKDAFWSSIPAVGFAMLFNVPPRMLKYCAMGGALAHS LRTLLIHYGMPIEWATLAAATTVGFVCVYWSRRLLAPRPVFSVASIIPMIPGSYAFKT MIAVVELNINGVTMELIQSAVENGLKALFIVGALSFGLAIPSLVVYRNRPII" misc_feature 965379..965834 /locus_tag="B565_0875" /note="Protein of unknown function (DUF1212); Region: DUF1212; cl01118" /db_xref="CDD:194040" gene 965862..966353 /locus_tag="B565_0876" /db_xref="GeneID:10486793" CDS 965862..966353 /locus_tag="B565_0876" /codon_start=1 /transl_table=11 /product="dihydrofolate reductase type 3" /protein_id="YP_004391528.1" /db_xref="GI:330828576" /db_xref="GeneID:10486793" /translation="MKISMIAAMAHDRVIGKDNQMPWHLPADLAHFKRVTLGKPVLMG RKTFESIGRPLPGRRNLVISRNPDYQAEGIEVVGSVEAALALLAGSLVEELMVIGGGH LYAEMLPSADCLYLTRIDLAVEGDTRFPAFDDGQWQRIACESHPADEKNPHPYSFETW QRR" misc_feature 965868..966344 /locus_tag="B565_0876" /note="Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5,10-...; Region: DHFR; cd00209" /db_xref="CDD:29264" misc_feature order(965877..965879,965928..965930,965943..965945, 966033..966035,966153..966155,966171..966173, 966210..966212) /locus_tag="B565_0876" /note="folate binding site [chemical binding]; other site" /db_xref="CDD:29264" misc_feature order(965883..965885,965904..965906,965994..966002, 966054..966056,966156..966167) /locus_tag="B565_0876" /note="NADP+ binding site [chemical binding]; other site" /db_xref="CDD:29264" gene complement(966433..967215) /locus_tag="B565_0877" /db_xref="GeneID:10486794" CDS complement(966433..967215) /locus_tag="B565_0877" /codon_start=1 /transl_table=11 /product="phosphoadenylyl-sulfate reductase" /protein_id="YP_004391529.1" /db_xref="GI:330828577" /db_xref="GeneID:10486794" /translation="MPLNVTEDGRLDLQALLALGREEQVEALAPLNRELDTMSASERV RWALANLPGEHVLSSSFGIQAALMLHLVSRERADVPVVLTDTGYLFPETYRFIDELTE RLALNLKTYRAELSQAWQEARFGLLWEQGVEGITRYNQLNKVEPMDRALREQGAQTWF SGLRREQSGSRGKLPVLGIQRGRFKFLPVIDWSNKDVFYYFKEFDLPYHPLWEQGYLS VGDVHTTAKWEPGMSEEQTRFFGLKRECGLHEENGENDGSGI" misc_feature complement(966436..967155) /locus_tag="B565_0877" /note="3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [Amino acid transport and metabolism / Coenzyme metabolism]; Region: CysH; COG0175" /db_xref="CDD:30524" misc_feature complement(966556..967056) /locus_tag="B565_0877" /note="This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. A highly...; Region: PAPS_reductase; cd01713" /db_xref="CDD:30168" misc_feature complement(order(966661..966663,966703..966705, 966787..966789)) /locus_tag="B565_0877" /note="Active Sites [active]" /db_xref="CDD:30168" gene complement(967205..968929) /locus_tag="B565_0878" /db_xref="GeneID:10486795" CDS complement(967205..968929) /locus_tag="B565_0878" /codon_start=1 /transl_table=11 /product="sulfite reductase [NADPH] hemoprotein beta-component" /protein_id="YP_004391530.1" /db_xref="GI:330828578" /db_xref="GeneID:10486795" /translation="MSKQPLSHQKAGPVEGPLADNERLKRESNFLRGTIEQDLQDPLT GGFNGDNFQLIRFHGMYQQDDRDIRPERAAQKLEPLHNVMLRARLPGGIITPAQWQII DKFAEEHSLYGSIRLTTRQTFQFHGVLKRDIKLMHQTLNSTGIDSIATAGDVNRNVLC TSNPVESELHQEAYEWAKKISEHLLPKTRAYVEIWLDGEKLGQDEEPILGSNYLPRKF KTTVVIPPHNDVDIHANDLNFVAIAENGKLVGFNVLVGGGLAMTHGDTTTYPRKASDF GFIPLSHVLEVAAAVVSTQRDWGNRVNRKNAKTKYTLERVGVEAFKAEVESRAGIQFG PVRPYEFTSRGDRFGWVEGIDGKHHLTLFIENGRLLDFPGKPLKTGMLEIAKVHQGDF RLTANQNLIIAGVPASEKARIEGLARQYGLLDDGVSEQRKQSMACVALPTCPLAMAEA ERMLPAFVTDIEGLLAKHGLADDAIIFRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHL GGNLEGTRIPRLYQENITEQQILAELDALIGRWATERKQGECFGDFVIRVGVIAPVID SARDFYAA" misc_feature complement(967214..968908) /locus_tag="B565_0878" /note="sulfite reductase subunit beta; Provisional; Region: PRK13504" /db_xref="CDD:184095" misc_feature complement(968504..968683) /locus_tag="B565_0878" /note="Nitrite/Sulfite reductase ferredoxin-like half domain; Region: NIR_SIR_ferr; pfam03460" /db_xref="CDD:190643" misc_feature complement(967688..967867) /locus_tag="B565_0878" /note="Nitrite/Sulfite reductase ferredoxin-like half domain; Region: NIR_SIR_ferr; pfam03460" /db_xref="CDD:190643" gene complement(968929..970719) /locus_tag="B565_0879" /db_xref="GeneID:10486796" CDS complement(968929..970719) /locus_tag="B565_0879" /codon_start=1 /transl_table=11 /product="sulfite reductase [NADPH] flavoprotein, alpha-component" /protein_id="YP_004391531.1" /db_xref="GI:330828579" /db_xref="GeneID:10486796" /translation="MQLKDSPFNLSPLSDEQQRQLGQVLSTLNTQQLAWVSGYLYGLS QTGQQSVAASAAVAAPSGSLTILYGSQTGNAKGVATAIKAQAEARGLPVTLASMADYK PKQLKKESHLLVVVSTYGEGEPPESAVDLFEQLKKGKIGKLDGLKFAVLGLGDSSYEF FCQTGKDFDDFLAKAGAERIYELASLDVDYQDAAKSWGEQALNAIATTLSTGVASSSV ANAVQQAVGHSQYSKENPFPAHLSVNQKITGRDSTKDIRHIEINLANSGITYQPGDAL GVWFDNDAELVGEVLALTGLSGDEATAHGTLRAALTSHFELTRLHGGFITGLADISDN AALKDLAGDKAQVNALVASAQVVDVLKRFPTALTTEQLVSLLRPLTPRLYSIASAQSE VEEEVHLTVGVVRYPQEDGTVRSGAASSYLADRLIEDGEVRVFIEHNDNFRLPANPDT PVIMVGPGTGIAPFRAFMQEREAIGASGKNWLFFGNPHFTQDFLYQVEWQRYVKSGLL SKISLAFSRDQANKIYVQDRLREAGLELYQWLEAGAHFYVCGDANKMAKDVQEALLDV IAEHGHKSREEAEEYLSELRRAKRYQRDVY" misc_feature complement(968932..970692) /locus_tag="B565_0879" /note="sulfite reductase [NADPH] flavoprotein, alpha-component; Region: cysJ; TIGR01931" /db_xref="CDD:188184" misc_feature complement(970129..970524) /locus_tag="B565_0879" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:193819" misc_feature complement(968932..969999) /locus_tag="B565_0879" /note="Cytochrome p450- like alpha subunits of E. coli sulfite reductase (SiR) multimerize with beta subunits to catalyze the NADPH dependent reduction of sulfite to sulfide. Beta subunits have an Fe4S4 cluster and a siroheme, while the alpha subunits (cysJ...; Region: SiR; cd06199" /db_xref="CDD:99796" misc_feature complement(order(969463..969474,969514..969516, 969520..969522,969565..969576,969895..969897)) /locus_tag="B565_0879" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99796" misc_feature complement(order(969565..969570,969574..969576)) /locus_tag="B565_0879" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99796" misc_feature complement(order(968932..968934,968938..968940, 969073..969075,969565..969567)) /locus_tag="B565_0879" /note="catalytic residues [active]" /db_xref="CDD:99796" misc_feature complement(order(969055..969057,969142..969144, 969148..969150,969169..969174,969259..969264, 969343..969345,969349..969351,969505..969516)) /locus_tag="B565_0879" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99796" misc_feature complement(order(969454..969456,969463..969465, 969472..969474)) /locus_tag="B565_0879" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99796" misc_feature complement(order(969331..969333,969337..969348, 969358..969360)) /locus_tag="B565_0879" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99796" gene 970909..971715 /locus_tag="B565_0880" /db_xref="GeneID:10486797" CDS 970909..971715 /locus_tag="B565_0880" /codon_start=1 /transl_table=11 /product="Phenazine biosynthesis protein PhzF family" /protein_id="YP_004391532.1" /db_xref="GI:330828580" /db_xref="GeneID:10486797" /translation="MSNIRLFHVNAFSRQPLGGNPAVVVLGPALPDASQLAMAAEFNL SETAFLVQLGRAHYQLRWFTPKVEVDLCGHGTLAAAHVLWQTGAVAAHETIRFETRSG ELLAQCEDEWIWLDFPRIALAPLTLDLAYAAALGCQPRQTLAAGAKFLLELASEEEIR TLSPDFHALRALPGRGVIVTAPSNDPNHDFVSRYFAPWVGVDEDPVTGSNHCALVPFW AERLGKRQLRARQISARGGELRLELQEERVLMAGQAVTLWQGEWLLPPAS" misc_feature 970909..971700 /locus_tag="B565_0880" /note="Predicted epimerase, PhzC/PhzF homolog [General function prediction only]; Region: COG0384" /db_xref="CDD:30733" misc_feature 970921..>971532 /locus_tag="B565_0880" /note="Diaminopimelate epimerase; Region: DAP_epimerase; cl14668" /db_xref="CDD:187422" gene complement(971835..973370) /locus_tag="B565_0881" /db_xref="GeneID:10486798" CDS complement(971835..973370) /locus_tag="B565_0881" /codon_start=1 /transl_table=11 /product="Lysyl-tRNA synthetase, heat inducible" /protein_id="YP_004391533.1" /db_xref="GI:330828581" /db_xref="GeneID:10486798" /translation="MSEQTITPEVDQTLELNNEMTERRSKLAALRAQGNPFPNDFRRD SLSGDLHAEFDDKSAEELTSLGKRVKIAGRIMTRRIMGKASFATLQDMAGKIQVYVTR DDLPEGFYNEQFKKWDLGDIVGVEGTLFKTQTGELSVHVSDIRLLTKALRPLPEKHKG LTDQEARCRQRYLDLIANEESRKTFMIRTQVVAGIRKFFNEKRFMEVETPMMQVIPGG ASARPFVTHHNALDIDMYLRIAPELYLKRLVVGGFERVYEINRNFRNEGISVRHNPEF TMIEFYMAYADYIDLMDLTEELLRTLAQDILGDTKIRYAKEGEEGLTIDFGQPFQRLT MVESILKFNPDVTLDDLATLESAKAVAKRLHIELMKGWELGHVITAIFEETVEHMLLQ PTFITEYPAAVSPLARRNDVNPDVTDRFEFFIGGRELANGFSELNDAEDQAKRFQDQV DQKEAGDDEAMFYDADFVTALEHGLPPTAGQGIGIDRLVMLFTNSHTIRDVILFPALR PQK" misc_feature complement(971838..973328) /locus_tag="B565_0881" /note="lysyl-tRNA synthetase; Reviewed; Region: lysS; PRK00484" /db_xref="CDD:179044" misc_feature complement(972846..973169) /locus_tag="B565_0881" /note="LysRS_N: N-terminal, anticodon recognition domain of lysyl-tRNA synthetases (LysRS). These enzymes are homodimeric class 2b aminoacyl-tRNA synthetases (aaRSs). This domain is a beta-barrel domain (OB fold) involved in binding the tRNA anticodon stem-...; Region: LysRS_N; cd04322" /db_xref="CDD:58592" misc_feature complement(order(972912..972920,972927..972929, 973005..973007,973095..973100,973149..973154)) /locus_tag="B565_0881" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:58592" misc_feature complement(order(972957..972959,972975..972977, 973017..973019,973074..973076,973080..973082, 973113..973115,973131..973136,973140..973142)) /locus_tag="B565_0881" /note="putative anticodon binding site; other site" /db_xref="CDD:58592" misc_feature complement(971844..972839) /locus_tag="B565_0881" /note="Lys_tRNA synthetase (LysRS) class II core domain. Class II LysRS is a dimer which attaches a lysine to the 3' OH group of ribose of the appropriate tRNA. Its assignment to class II aaRS is based upon its structure and the presence of three...; Region: LysRS_core; cd00775" /db_xref="CDD:29820" misc_feature complement(972729..972743) /locus_tag="B565_0881" /note="motif 1; other site" /db_xref="CDD:29820" misc_feature complement(order(971910..971912,972066..972068, 972078..972080,972087..972089,972108..972110, 972543..972545,972555..972557,972573..972575, 972579..972581,972645..972647)) /locus_tag="B565_0881" /note="active site" /db_xref="CDD:29820" misc_feature complement(972573..972584) /locus_tag="B565_0881" /note="motif 2; other site" /db_xref="CDD:29820" misc_feature complement(971910..971921) /locus_tag="B565_0881" /note="motif 3; other site" /db_xref="CDD:29820" gene complement(973387..974289) /locus_tag="B565_0882" /db_xref="GeneID:10486799" CDS complement(973387..974289) /locus_tag="B565_0882" /codon_start=1 /transl_table=11 /product="peptide chain release factor 2" /protein_id="YP_004391534.1" /db_xref="GI:330828582" /db_xref="GeneID:10486799" /translation="MVGTIDTLTQGVDDVEMLVSLAVEGEDEETFNEAIAESEQLEAK LVDLEFRRMFSGQHDGSDCYIDIQSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIE CSEGDVAGIKSATIKFTGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPE IDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHVPTGVVVQCQNDRSQHKN KDQCMKQLKAKLYELEIQKQNAEKQALEETKSDIGWGSQIRSYVLDDSRIKDLRTGVE TRNTQSVLDGDLDKFIEASLKSGL" misc_feature complement(973390..974286) /locus_tag="B565_0882" /note="peptide chain release factor 2; Provisional; Region: PRK08787" /db_xref="CDD:136970" misc_feature complement(973900..974229) /locus_tag="B565_0882" /note="RF-1 domain; Region: RF-1; cl02875" /db_xref="CDD:194471" misc_feature complement(973474..973782) /locus_tag="B565_0882" /note="RF-1 domain; Region: RF-1; cl02875" /db_xref="CDD:194471" gene 974739..976613 /locus_tag="B565_0883" /db_xref="GeneID:10486800" CDS 974739..976613 /locus_tag="B565_0883" /codon_start=1 /transl_table=11 /product="Cache sensor-containing methyl-accepting chemotaxis sensory transducer" /protein_id="YP_004391535.1" /db_xref="GI:330828583" /db_xref="GeneID:10486800" /translation="MMKNLSLKQKILLSVVIALSLVILLLSWQSYSSQKSLLLQGSQE QLQRLGTQQAERVSDWLAARRDVIQALGNKAGAEPLNALQQAQVSGRFQLTYFGESSG KMNDSDPSINRDGYDPRSRGWYQEAMSKGGLIVTKPYLDVAYNIMVVTLAQPVSGGVV GGDLSIASLVEDVTKMQLPADGFAIMMHKDGTIIAYKDAAKAMKPASEIDNDLTNALI EQSKSSKELVPAYFDNEGRDKLLWAADIPDTDWELVLVLDKAALEAPLSSLLMTQLGM ALLVLVGSILAISWLVSMLLGPLTKVSQALARIADGNGDLTQRIKIDANDEVGQLANS FNRFVGSQHQLIGNIRQLANELNADAERSLVTNQAAVDELQRQQQEVTMVATAVTEMA SATMEIAGNAENTAAAAQQSAQSSEQGKMLVNKTRQSINGLAEEVGQATEVIGELSRH AQAITSILSTIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSRRTQDSTQ QIQSTIETLQQTTARAVSLMQTSQGLADNSVQDADQAVRALEEITSAISLISDMAGQI ATAAEEQTQVTGEITQNTTAIKDVSDEITAAAMRDLDQAHSLKGRAADLNQQVSTFIL " misc_feature 975141..975332 /locus_tag="B565_0883" /note="Cache domain; Region: Cache_1; pfam02743" /db_xref="CDD:145738" misc_feature <975495..>975827 /locus_tag="B565_0883" /note="Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms]; Region: NarQ; COG3850" /db_xref="CDD:33640" misc_feature 975621..975761 /locus_tag="B565_0883" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cd06225" /db_xref="CDD:100122" misc_feature order(975621..975626,975633..975638,975642..975647, 975654..975659,975663..975665,975717..975722, 975726..975731,975738..975743,975747..975752, 975759..975761) /locus_tag="B565_0883" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100122" misc_feature 975852..976604 /locus_tag="B565_0883" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 976038..976604 /locus_tag="B565_0883" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(976854..978053) /locus_tag="B565_0884" /db_xref="GeneID:10486801" CDS complement(976854..978053) /locus_tag="B565_0884" /codon_start=1 /transl_table=11 /product="glutamate transport protein" /protein_id="YP_004391536.1" /db_xref="GI:330828584" /db_xref="GeneID:10486801" /translation="MLQLDSYATLVAATLVLLLGRVLVTRVGLLRTFNIPKPVAGGLV VALVLLLLRSTLQMELQFDTSLQTPLMLAFFASIGLSADLASLKRGGKAVVTFLMVVT GLLLVQNSLGVGLATLLGLDPHMGLLAGSITLSGGHGTGAAWSATFSEKYGVQSAAEL AIACATFGLVLGGLIGGPVARYLVKKVQVPGEEHNQDEAPQGFEMPDMERPLTTFSVI ETLALIAISLKGGELLSASLKGGAFELPIFVCVLFVGVLLRNVLTLLNWHEVSDREVS LLGNVSLSLFLAMALMSLKLWDLASLALPIFILLAAQTVAMALYAIFVTFRVMGKNYD AAVLAAGHCGFGLGATPTAIANMQAITQRFGPSHLAFLVVPMVGAFFIDIINAMVIKL FMAMPFL" misc_feature complement(976860..977957) /locus_tag="B565_0884" /note="sodium--glutamate symport carrier (gltS); Region: gltS; TIGR00210" /db_xref="CDD:129314" gene 978500..979507 /locus_tag="B565_0885" /db_xref="GeneID:10486802" CDS 978500..979507 /locus_tag="B565_0885" /codon_start=1 /transl_table=11 /product="L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D" /protein_id="YP_004391537.1" /db_xref="GI:330828585" /db_xref="GeneID:10486802" /translation="MKKSIYIAYTGGTIGMQRSDHGYVPMAGFMEDCLARMPEFHRPE MPDYHIHEYAPLIDSSDMTPADWQRIAEDIRDNYDKYDGFVILHGTDTMSFTASALSF MLEDLHKPVIITGSQIPLAELRSDGQQNLLNALYIAANYPIHEVTLFFNNQLYRGNRS KKVHADGFHAFDSPNYPPLLNAGIAISLEAGELGVPSERPLVLHDITPQPIGVVTLYP GISSEVIANILQQPVKALILLSFGVGNAPQNPAMLALLSEASARGVIIVNLSQCLHGK VNMGGYATGNALSRAGVISGFDMTAEAALTKLHFLLSQDLPSHRIRELMQQSLRGELT P" misc_feature 978506..979474 /locus_tag="B565_0885" /note="Asparaginase (amidohydrolase): Asparaginases are tetrameric enzymes that catalyze the hydrolysis of asparagine to aspartic acid and ammonia. In bacteria, there are two classes of amidohydrolases, one highly specific for asparagine and localised to the...; Region: Asparaginase; cl00216" /db_xref="CDD:193714" misc_feature order(978533..978538,978566..978568,978674..978679, 978764..978772,978845..978847,978983..978985) /locus_tag="B565_0885" /note="active site/substrate binding site [active]" /db_xref="CDD:29532" misc_feature order(978536..978538,978566..978568,978677..978691, 978698..978700,978770..978772,978782..978784, 978851..978853,978866..978874,978881..978886, 978950..978955,978965..978967,978971..978973, 978983..978994,978998..979000,979028..979036, 979040..979042,979061..979063,979067..979075, 979079..979084,979136..979138,979142..979144, 979148..979150,979160..979162,979166..979168, 979190..979192,979196..979198,979220..979228, 979232..979234,979238..979240,979307..979309, 979331..979336) /locus_tag="B565_0885" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:29532" gene complement(979743..980036) /locus_tag="B565_0886" /db_xref="GeneID:10486803" CDS complement(979743..980036) /locus_tag="B565_0886" /codon_start=1 /transl_table=11 /product="general negative regulator of transcription subunit 1" /protein_id="YP_004391538.1" /db_xref="GI:330828586" /db_xref="GeneID:10486803" /translation="MSFQQGEFLQAIRQMPEEVYERLKTAVELGKWPDGKHLTDEQKA TSLQAVMAWQAMHLDNPEHMNIGRDGEIVMKSKSELKRQYRDEEEIVRVDLNH" misc_feature complement(979755..980009) /locus_tag="B565_0886" /note="Protein of unknown function (DUF1315); Region: DUF1315; cl01215" /db_xref="CDD:120479" gene complement(980108..981541) /locus_tag="B565_0887" /db_xref="GeneID:10486804" CDS complement(980108..981541) /locus_tag="B565_0887" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="YP_004391539.1" /db_xref="GI:330828587" /db_xref="GeneID:10486804" /translation="MTHEHYLQAWQESQELAEAMQPLIGRLYRQQGVEITLYGRPLQN ASTIDILKAHRVVRRHQGAPLPIQQSFPLLQAIVALKPTAAEVDLGKLAVGYWQDHQD EAGIEDYLQARLAPALGRNQMPQPTDVVLYGFGRIGRLLARLLIERTGAANPLRLRAI VVRGGRDGDLEKRASLLRRDSVHGPFNGSIEVDVERSAIIANGTFIQVIYANSPADID YTAYGIHDALIVDNTGVWRDEAGLSEHLKARGAGKVLLTAPGKGEMKNVVFGVNHEVI GPGDRIISAASCTTNAITPVLKVMQERFGIRHGHVETVHSYTNDQNLIDNYHKGERRG RSAALNMVMTSTGAAKAVAKALPELKGKLTGNAIRVPTPNVSLAIINLSLEQATDRES LNAYLQQMALSSALHRQIDFSASTELVSSDMVGSRYAGIVDSQATIAEGDHCVLYVWY DNEFGYSCQVVRVMEQMAGVVRQDLPA" misc_feature complement(980114..981541) /locus_tag="B565_0887" /note="glyceraldehyde-3-phosphate dehydrogenase; Reviewed; Region: PRK08289" /db_xref="CDD:181355" misc_feature complement(980678..981079) /locus_tag="B565_0887" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(980192..980665) /locus_tag="B565_0887" /note="Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Region: Gp_dh_C; pfam02800" /db_xref="CDD:145777" gene 981753..982553 /locus_tag="B565_0888" /db_xref="GeneID:10486805" CDS 981753..982553 /locus_tag="B565_0888" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391540.1" /db_xref="GI:330828588" /db_xref="GeneID:10486805" /translation="MANFPLRQTFIMLSVGLAVAGCNDDRIHNICGNHPELCQDLVDD GWCRYERTDVIRSRFYLKEEGTDRRKYELMRNLERYLKCAERSTSIEYKNAREQKSPR VEGMLAAGDQLAQLDAATRNSQDPYLLLWHWTNNTNELARQQFMALEGSKALDEPELQ LALGGIYAKSDPEKAIATLQHGLSLYQEGDKVNSRIFTSLSTLYMGQKQYGLAYLWGK VSESFQDSPEVSAKRFGIYHTLSKTEQDGYDVRAAEIVEQLKHGNYRP" misc_feature 981804..982409 /locus_tag="B565_0888" /note="Protein of unknown function (DUF2989); Region: DUF2989; pfam11207" /db_xref="CDD:151649" gene 982561..983124 /locus_tag="B565_0889" /db_xref="GeneID:10486806" CDS 982561..983124 /locus_tag="B565_0889" /codon_start=1 /transl_table=11 /product="MutT/nudix family protein" /protein_id="YP_004391541.1" /db_xref="GI:330828589" /db_xref="GeneID:10486806" /translation="MTTFSPASCWPNPFDLSFIHGEVRTDGRTLERLTVRAVVPRGGE LLLVHSRVNGDLMFPGGGIEAGESHRVALARELLEECGAELRELGGLLGETREYRAAR EPGFDAYCIRSLYYLCRIGDQLVAPQPQPYEIRLGFVPGWFALDEALQTNKTQLAGPC PQWTARETRVLAQLQRWHQQGIFDHGY" misc_feature 982657..983031 /locus_tag="B565_0889" /note="Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or...; Region: Nudix_Hydrolase; cl00447" /db_xref="CDD:189099" misc_feature order(982741..982749,982777..982803) /locus_tag="B565_0889" /note="nudix motif; other site" /db_xref="CDD:72880" gene complement(983229..984176) /locus_tag="B565_0890" /db_xref="GeneID:10486807" CDS complement(983229..984176) /locus_tag="B565_0890" /codon_start=1 /transl_table=11 /product="lipoic acid synthetase" /protein_id="YP_004391542.1" /db_xref="GI:330828590" /db_xref="GeneID:10486807" /translation="MEPGVKLRDGDKMALIPVKFMPDPNEELLRKPDWMRIKLPPSSQ KIEHIKSTLRKNKLHSVCEEASCPNLAECFNHGTATFMIMGAICTRRCPFCDVAHGRP LALDPEEPKKLALTIKEMNLKYVVITSVDRDDLRDGGAQHFADCIREIREHSPQTRIE ILTPDFRGRMEQALEVFRETPPDVFNHNLETAPRMYRVARPGADYKWSLELLRRIKEM HPNVPTKSGLMMGLGETNEEIVEVLKDLRAHGVNMLTLGQYLQPSRHHLPVKRYVPPA EFDELKDVAMELGFTHAACGPFVRSSYHADLQAKGEEVK" misc_feature complement(983232..984104) /locus_tag="B565_0890" /note="lipoyl synthase; Provisional; Region: PRK05481" /db_xref="CDD:180115" misc_feature complement(983346..983924) /locus_tag="B565_0890" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(983400..983405,983490..983492, 983613..983615,983685..983693,983778..983783, 983787..983789,983889..983897,983901..983903, 983907..983909,983913..983915)) /locus_tag="B565_0890" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" gene complement(984191..984868) /locus_tag="B565_0891" /db_xref="GeneID:10486808" CDS complement(984191..984868) /locus_tag="B565_0891" /codon_start=1 /transl_table=11 /product="Octanoyltransferase" /protein_id="YP_004391543.1" /db_xref="GI:330828591" /db_xref="GeneID:10486808" /translation="MSSQIPAQSSLIVRQLGRRPYQPVWDAMKAFTDNRTSDTPDEFW VVEHDPVYTQGQAGKAEHLLNPGNIPVVQSDRGGQVTYHGPGQLVLYVLVDVRRCKFS VRELVTALETAIINTLAKSDIQAYAKADAPGVYVKNDLGMEAKLASLGLRIRKGCSFH GLALNINMDMTPFLHINPCGYAGMAMTQTSALGGPQSVAEAQSILVTELARLIGYQTI TNTESES" misc_feature complement(984209..984853) /locus_tag="B565_0891" /note="Biotin/lipoate A/B protein ligase family; Region: BPL_LplA_LipB; cl14057" /db_xref="CDD:187213" gene complement(984931..985194) /locus_tag="B565_0892" /db_xref="GeneID:10486809" CDS complement(984931..985194) /locus_tag="B565_0892" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391544.1" /db_xref="GI:330828592" /db_xref="GeneID:10486809" /translation="MNTKFDELLEFPCKFPFKVLGVADPALPEMVVEVLQQHAPGTYS PTVQPSSKGNYHSVRVTVTAQSKEHIEAMYHALGKIELVKYVL" misc_feature complement(984934..985194) /locus_tag="B565_0892" /note="Protein of unknown function (DUF493); Region: DUF493; cl01102" /db_xref="CDD:194035" gene complement(985487..986683) /locus_tag="B565_0893" /db_xref="GeneID:10486810" CDS complement(985487..986683) /locus_tag="B565_0893" /codon_start=1 /transl_table=11 /product="Penicillin-binding protein" /protein_id="YP_004391545.1" /db_xref="GI:330828593" /db_xref="GeneID:10486810" /translation="MSKFARSVLLASLISVTAQANTPVPTPTPNAMPMVVPAAPEISA KAHILIDYYSGQVLAEQNAEERLPPASLTKMMTSYIIGQELLKGNIKRTDMVTISQNA WSKNYSDSSKMFIEVGKQVSVDDLNKGIIIQSGNDACVAMAEFLAGSTDSFASLMNSW AAKLGMNDSHFMNPHGLDAEGHYSTAHDMARLGQALIRDLPEEYKIYSQKSFVFNGIT QHNRNRLLWDQSLQVDGIKTGHVSQVGYNLVSSATNNEGMRLIAVVLGASSEASRAAE SKKLLTYGFRFFQSLTPYKAGTELVTQKIWMGDKPEVKLGVDKDVSVLVTRGQGNNLK ADFQLDSELKAPLAKGQRVGTVFLKQGDKEIKQVPLVALEEVQEGGLMSRLWDYLVLL VTSWFK" misc_feature complement(985493..986563) /locus_tag="B565_0893" /note="D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]; Region: DacC; COG1686" /db_xref="CDD:31872" misc_feature complement(<985937..986563) /locus_tag="B565_0893" /note="Beta-lactamase; Region: Beta-lactamase; cl01009" /db_xref="CDD:194006" misc_feature complement(985550..985822) /locus_tag="B565_0893" /note="Penicillin-binding protein 5, C-terminal domain; Region: PBP5_C; pfam07943" /db_xref="CDD:191901" gene complement(986870..987808) /locus_tag="B565_0894" /db_xref="GeneID:10486811" CDS complement(986870..987808) /locus_tag="B565_0894" /codon_start=1 /transl_table=11 /product="Rare lipoprotein A" /protein_id="YP_004391546.1" /db_xref="GI:330828594" /db_xref="GeneID:10486811" /translation="MLAACSSQPEQSAPVEPQAPVSKPPVIEIPQATGAIPRPEPLSA SGNRDYWIGKQKHEVWRDIKHYSEEGTASWLSPDLDGQKTANGDVLDSKLFSAAHRNL PIPSYVRVTNLDNGLETIVRVNDRGPFNSPRLIDLSYAAAKQLEMVDSGEARVRLELI SDTPDQMVIMEPMKPIEMTPTTPAAASNTLSQDGFLGEPTALAMATPAADPAPVKAPA AKPAKAVPVKPASAKAAAPASSGDGKMIQVLASGSRDRAEAMGKVMTQRYGVPYRIDA HGAIFRVLIGPVAADQQASVLEKVRQGGLEQAFIVP" misc_feature complement(987254..987808) /locus_tag="B565_0894" /note="Lipoproteins [Cell envelope biogenesis, outer membrane]; Region: RlpA; COG0797" /db_xref="CDD:31140" misc_feature complement(987341..987601) /locus_tag="B565_0894" /note="Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Region: DPBB_1; cl04011" /db_xref="CDD:186611" misc_feature complement(986873..987076) /locus_tag="B565_0894" /note="Sporulation related domain; Region: SPOR; cl10051" /db_xref="CDD:186898" gene complement(987792..988775) /locus_tag="B565_0895" /db_xref="GeneID:10486812" CDS complement(987792..988775) /locus_tag="B565_0895" /codon_start=1 /transl_table=11 /product="Lytic murein transglycosylase B" /protein_id="YP_004391547.1" /db_xref="GI:330828595" /db_xref="GeneID:10486812" /translation="MLLSLATTMATAAVSPDRLALLADQQQVPLAELQAAVARAQLRQ EVLDTISKPWEAKPWHRYRPLFVTPERIRDGQQFWQQHAETLARAEQTYRVPASLIVA IIGVETFYGRQMGRHPVLDSLYTLGFHYPERSDFFAKEFAQLVVLAKEEGWQLDTLKG SYAGAMGMGQFMPSSYRHYAVDFDGDGKRDLFANPVDAIGSVANYFASHQWRWGESVV EPAQIGLMAVEPLLRPEPELTQQWSELAAAGIELATPLAPQTPVKLLAFAQADGPEYW VARHNFYVITRYNRSPLYAMAVYQLSQAIQEAYASSSQTPPAQPELVAGRL" misc_feature complement(987861..988577) /locus_tag="B565_0895" /note="lytic murein transglycosylase; Region: MltB_2; TIGR02283" /db_xref="CDD:162796" misc_feature complement(<988125..988301) /locus_tag="B565_0895" /note="Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain. Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic 'goose-type' lysozymes (GEWL). LTs catalyze...; Region: LT_GEWL; cd00254" /db_xref="CDD:29556" misc_feature complement(order(988161..988163,988260..988262)) /locus_tag="B565_0895" /note="N-acetyl-D-glucosamine binding site [chemical binding]; other site" /db_xref="CDD:29556" gene complement(988790..989893) /locus_tag="B565_0896" /db_xref="GeneID:10486813" CDS complement(988790..989893) /locus_tag="B565_0896" /codon_start=1 /transl_table=11 /product="Rod shape-determining protein RodA" /protein_id="YP_004391548.1" /db_xref="GI:330828596" /db_xref="GeneID:10486813" /translation="MSNSARQQSIWYKLHIDLPLLLGLLAVMTLSMVVLYSASGQDMD SIVRQLVRGGLAFALMIGLAQLPPSLYARWSVPLFAVVVLMLIAVDVFGHIGKGAQRW LDLGFMKFQPSEVMKLSMPIMVAAWLSRHSLPPKFSHVVIALIMVLLPTLLIAAQPDL GTSILVAASGFFVIFLAGLSWWLIGLAVLLMLAFMPVLWFFLMHDYQRQRVLMLLDPE KDPLGRGYHIIQSKIAIGSGGVFGKGWLQGTQSQLEFLPERHTDFIFAVFSEEFGLVG VALLLVLYLYVISRCLFISMQAQNSFERLLGGAITLTFFVYVFVNMGMVSGILPVVGV PLPLVSYGGTSMVTLMAGFGILMSIQTHRRLLA" misc_feature complement(988793..989893) /locus_tag="B565_0896" /note="Cell cycle protein; Region: FTSW_RODA_SPOVE; cl00511" /db_xref="CDD:189110" gene complement(989886..991808) /locus_tag="B565_0897" /db_xref="GeneID:10486814" CDS complement(989886..991808) /locus_tag="B565_0897" /codon_start=1 /transl_table=11 /product="Penicillin-binding protein 2" /protein_id="YP_004391549.1" /db_xref="GI:330828597" /db_xref="GeneID:10486814" /translation="MLKQRIEMRDHSAEGNLFFRRTLVAYIGIVVLMLVLLGNLYYLQ VESYDTYQTRSNSNRIRVVPVAPPRGLIYDTNGVLLAENRPVYSLEIVPEETKDLEKT ADQLITLLGLPEGTKEKFLAEVKRQRRFKPVPLYEKLTEYQVALFSVNQHNYPGASIE AYLKRYYPFGDTLTHALGYVAKINTRDVERLEKEEKLANYAATKDIGKQGVEKYYEDE LHGVAGYQEVEVNNRGRIVRTLKFQPPIPGKDIYLNIDVRMQLKAQQLLAGQRGAIVM MDPKTGAILALESSPSYDPNLFVTGISSANYSALLNDPARPLVNRTTQGIYAPASTVK PMMSIMGLNEGAITPGYRYFGGPSFSIPGTTKKFRDWRRWGHGWLDVYRAIEVSADTY FYDLAYRVGIDKIHSYMTKFGFGQYTGVDLYEETKGVMPSRDWKMARWRQPWYQGDTI SVGIGQGYWSATPLQLAKAISILTQNGHDVTPHLLKSTASQAGVVDAPINPNIALKLK NDSFWKVAQEGMWRVNHGSEGSGRHSFAKAPYSSGGKSGTAQVVGLKENQVYNIKTVK AEHRDNALFVAYAPFEAPKAVVALVLENSIGGGGGRAASPIARQMLDAYLLPPDPQLP PAPEKPSQPSEVAPNE" misc_feature complement(989976..991751) /locus_tag="B565_0897" /note="penicillin-binding protein 2; Region: pbp2_mrdA; TIGR03423" /db_xref="CDD:188321" misc_feature complement(991089..991616) /locus_tag="B565_0897" /note="Penicillin-binding Protein dimerisation domain; Region: PBP_dimer; pfam03717" /db_xref="CDD:190723" misc_feature complement(989979..990995) /locus_tag="B565_0897" /note="Penicillin binding protein transpeptidase domain; Region: Transpeptidase; cl01039" /db_xref="CDD:154162" gene complement(991912..992379) /locus_tag="B565_0898" /db_xref="GeneID:10486815" CDS complement(991912..992379) /locus_tag="B565_0898" /codon_start=1 /transl_table=11 /product="ribosomal RNA large subunit methyltransferase H" /protein_id="YP_004391550.1" /db_xref="GI:330828598" /db_xref="GeneID:10486815" /translation="MKIQLIAVGTKMPAWVEHGFEEYRRRFPKDMPFELVEIGAGKRG KNADIPRILQKEGEAMLAAAGRSRIVTLDIPGKPWTTEQLATQLEAWKLDGRDVALLV GGPEGLSPECKAAAEQSWSLSPLTLPHPLVRVLVAESLYRAWSITTNHPYHRE" misc_feature complement(991918..992376) /locus_tag="B565_0898" /note="Predicted SPOUT methyltransferase; Region: SPOUT_MTase; cl00679" /db_xref="CDD:186141" gene complement(992399..992740) /locus_tag="B565_0899" /db_xref="GeneID:10486816" CDS complement(992399..992740) /locus_tag="B565_0899" /codon_start=1 /transl_table=11 /product="iojap-like protein" /protein_id="YP_004391551.1" /db_xref="GI:330828599" /db_xref="GeneID:10486816" /translation="MQGQELHAFIIDKIDDMKGRDIITLDVRGKSSITDTMIICSGNS SRHVSAIAHHLASEARHAGLDLLSVEGQLSGEWVLVDMGSVIVHVMQDEHRDFYQLEK LWSGAAQMNTQ" misc_feature complement(992429..992725) /locus_tag="B565_0899" /note="Domain of unknown function DUF143; Region: DUF143; cl00519" /db_xref="CDD:193850" gene complement(992844..993494) /locus_tag="B565_0900" /db_xref="GeneID:10486817" CDS complement(992844..993494) /locus_tag="B565_0900" /codon_start=1 /transl_table=11 /product="putative nicotinate-nucleotide adenylyltransferase" /protein_id="YP_004391552.1" /db_xref="GI:330828600" /db_xref="GeneID:10486817" /translation="MLKAPIGLLGGTFDPIHIGHLRPAIEARDALGLAEMRLIPNHIP PHRANPFCSSEQRLAMVKLAAAENRDFVVDERELQRDKPSYTIDTLIALRHELPDTPL CFLMGMDSLLSLPSWHRWQELLDHAHLVVSVRPGWQPDYPAEVAQLLARHHTTDANAL HLRLAGHIWLADNQPIELSATRLRALLDGGQDTRYLLPESVAHYIDQQGLYRANRR" misc_feature complement(992859..993479) /locus_tag="B565_0900" /note="Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism]; Region: NadD; COG1057" /db_xref="CDD:31257" misc_feature complement(992862..993479) /locus_tag="B565_0900" /note="Nicotinamide/nicotinate mononucleotide adenylyltransferase; Region: NMNAT; cd02165" /db_xref="CDD:185680" misc_feature complement(order(992961..992963,993093..993098, 993141..993146,993165..993170,993174..993179, 993183..993185,993237..993245,993363..993365, 993426..993428,993435..993440,993444..993446, 993456..993470)) /locus_tag="B565_0900" /note="active site" /db_xref="CDD:185680" misc_feature complement(993435..993446) /locus_tag="B565_0900" /note="(T/H)XGH motif; other site" /db_xref="CDD:185680" gene complement(993488..994525) /locus_tag="B565_0901" /db_xref="GeneID:10486818" CDS complement(993488..994525) /locus_tag="B565_0901" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit delta" /protein_id="YP_004391553.1" /db_xref="GI:330828601" /db_xref="GeneID:10486818" /translation="MRVYPEQFGDHLKAGLRPCYLVFGDEPLLRLEAIDAIRQVARKQ GFDERHTFVVEQGLDWNQVYDACQAMSLFSARQIIELELPAKVDKDLAARISEIGKQL HPDLLLVLSGGRLNQTQMKAAWFDKLYQIGTYVPVNHPEPKFFPRWMSARFARFGLKA LPDAINFMCHSYEGNLLAASQEIEKLTLLSPPQPISVTYLQETIIRHAHFTPFQLVDT LLEGKVNRAQRILAALRAEGTEPGMLAWTLCRELEQLTELSLAMRNGQPLGEHFSRLR IWQSRQQLIQQALTRLPFAKLQQLWQLMAQLDDAQRRFDTEQAWLMLQTIALGFRDGT PLPLVMESSPC" misc_feature complement(993602..994525) /locus_tag="B565_0901" /note="DNA polymerase III subunit delta; Reviewed; Region: holA; PRK05574" /db_xref="CDD:180139" misc_feature complement(993962..994468) /locus_tag="B565_0901" /note="DNA polymerase III, delta subunit; Region: DNA_pol3_delta; pfam06144" /db_xref="CDD:148006" gene complement(994539..995021) /locus_tag="B565_0902" /db_xref="GeneID:10486819" CDS complement(994539..995021) /locus_tag="B565_0902" /codon_start=1 /transl_table=11 /product="Rare lipoprotein B" /protein_id="YP_004391554.1" /db_xref="GI:330828602" /db_xref="GeneID:10486819" /translation="MGTIFTRWMAIVLAGLLLQGCGFHMRGNGIPSELMTMKVVGDNK SDFYRMVTTRLKASGVTLADKEGIPVLTLGGVGSTSQVASVNALGTDTEYVLGFGTQF TISVPGKPTQVFPINFNRSFLNKPDAALASSREQEQLNREMQEQAANQVIRQLSQVSF " misc_feature complement(994548..995000) /locus_tag="B565_0902" /note="Lipopolysaccharide-assembly; Region: LptE; cl01125" /db_xref="CDD:186347" gene complement(995227..997803) /locus_tag="B565_0903" /db_xref="GeneID:10486820" CDS complement(995227..997803) /locus_tag="B565_0903" /codon_start=1 /transl_table=11 /product="Leucyl-tRNA synthetase, class Ia" /protein_id="YP_004391555.1" /db_xref="GI:330828603" /db_xref="GeneID:10486820" /translation="MQEQYVPQSIEPAVQKHWDAKKTFKAVEKVDKEKFYCLSMFPYP SGRLHMGHVRNYTIGDVISRYQRLNGKNVLQPIGWDAFGLPAENAAIKNNTAPAPWTY ENIEYMKNQLKMLGLGYDWDREIATCKPDYYRWEQWFFTKLYEKGLVYKKTSSVNWCP NDMTVLANEQVVDNCCWRCDTPVEQKEIPQWFIKITDYAEELLSDIDNLEGWPEMVKT MQRNWIGRSEGVNISFTIEGQAEQLEVYTTRPDTFMGVTYVGIAAGHPLALQAAQNNP ELAAFIEECKNTKVAEAELATMEKKGMATGLYAIHPLDGRKVPVWVANFVLMNYGTGA VMAVPAHDQRDFEFATKYGLDIKAVIKPVEGDVDVSEAAYTEKGVLFNSGEFDGLDFQ GAFDAIASKLEGLGKGKRTVNYRLRDWGVSRQRYWGAPIPMLTLADGTVVPTPEDQLP VLLPEDVVMDGIQSPIKADAEWAKTTYNGQEAFRETDTFDTFMESSWYYARYCSPDYD KGMLDPAAANHWLPVDQYIGGIEHACMHLLYARFFHKLLRDAGLVNSDEPFKRLLCQG MVLADAFYYKDEKGGNVWVSPTDVKVERDEKGRITKAIDNEGREVMHSGMTKMSKSKN NGIDPQLMVERYGADTVRLFMMFASPAEMTLEWSDSGVEGAQRFLRRLWRVTFEHVSG GSVAALDVAALTNEQKAVRRELHKTIAKVSDDVGRRQTFNTAIAAIMELMNNLAKLGN DEQDRALMQEALEAVVVMLYPITPHIGFELWKMLGKGDDIDHAAWPVADEAAMVETEK LVVVQINGKMRGKLTVPAEISQADVEKLAMADASVQKFTDGLTVRKVIYVPGKLLNIV AN" misc_feature complement(995230..997803) /locus_tag="B565_0903" /note="leucyl-tRNA synthetase; Validated; Region: leuS; PRK00390" /db_xref="CDD:178996" misc_feature complement(<997129..997704) /locus_tag="B565_0903" /note="catalytic core domain of leucyl-tRNA synthetases; Region: LeuRS_core; cd00812" /db_xref="CDD:173906" misc_feature complement(997648..997659) /locus_tag="B565_0903" /note="HIGH motif; other site" /db_xref="CDD:173906" misc_feature complement(995833..>996600) /locus_tag="B565_0903" /note="nucleotidyl transferase superfamily; Region: nt_trans; cl00015" /db_xref="CDD:193613" misc_feature complement(995935..995946) /locus_tag="B565_0903" /note="active site" /db_xref="CDD:173912" misc_feature complement(995935..995946) /locus_tag="B565_0903" /note="KMSKS motif; other site" /db_xref="CDD:173912" misc_feature complement(995482..995835) /locus_tag="B565_0903" /note="Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases; Region: Anticodon_Ia_Leu_BEm; cd07958" /db_xref="CDD:153412" misc_feature complement(order(995584..995586,995596..995598, 995605..995607,995614..995619,995626..995628, 995638..995640,995791..995793,995803..995805, 995812..995817,995824..995826)) /locus_tag="B565_0903" /note="tRNA binding surface [nucleotide binding]; other site" /db_xref="CDD:153412" gene 997949..998443 /locus_tag="B565_0904" /db_xref="GeneID:10486821" CDS 997949..998443 /locus_tag="B565_0904" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391556.1" /db_xref="GI:330828604" /db_xref="GeneID:10486821" /translation="MDKRQKGYEAFIAELQKQWQETEEFQGERLNRMIAKVQAYLEAA SDLTQDELALIAEYVKRDLGNYDEGRHDDSAQVEESAFMLALKDTAWSWLADVTDRAQ VEWRELADELEHKGVYEAGDWVGLGVMVCDQCGWRHTVLHPQQLDTCPECGCAEYHRE PLSP" misc_feature 997949..998440 /locus_tag="B565_0904" /note="hypothetical protein; Provisional; Region: PRK11032" /db_xref="CDD:182915" misc_feature 997991..998434 /locus_tag="B565_0904" /note="Protein of unknown function (DUF1451); Region: DUF1451; pfam07295" /db_xref="CDD:148732" gene complement(998528..999868) /locus_tag="B565_0905" /db_xref="GeneID:10486822" CDS complement(998528..999868) /locus_tag="B565_0905" /codon_start=1 /transl_table=11 /product="PmbA protein" /protein_id="YP_004391557.1" /db_xref="GI:330828605" /db_xref="GeneID:10486822" /translation="MSTIDMNQLLTRLLDKVADLGAEADIIANQERAFSLKADKGELG EYKVTSSQQLGIRLIKEGRVGIAYSESLDELALDAMLQDALDASRFAKVDADQRISVA NSRITTDCAEINQPDTTPVEEKIALALRLESDMLAMPYVSGAPYNSFFEGESQLWLAN SQGTLCQHGEFSVGCYTSALVERDGRQSMHSQGQYGRRFDELDSQALIEQIYAITDGL LPGEAVPSGRYSVIFSTNCFASLFGCFQGVLSGKWAQQGINPWRSKVGQSVASRWLTL ESRVYMPGGMNIKAFDGEGAASSDLLLIGEGELKTLLHNSATARHFGVASNGSAARGA RSALDVTARHLVFGAGPHSEAEVQSGDYLELVKLDGLHSGADAVSGDFSFGASGFLCR DGVRLQPVRGITVAGNFYRLLGELEAVGDTLHHNDSKGFYAPQIRFGGLSVAGK" misc_feature complement(998531..999853) /locus_tag="B565_0905" /note="Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]; Region: TldD; cl00398" /db_xref="CDD:193802" misc_feature complement(998933..999802) /locus_tag="B565_0905" /note="Putative modulator of DNA gyrase; Region: PmbA_TldD; pfam01523" /db_xref="CDD:190021" gene complement(999868..1001268) /locus_tag="B565_0906" /db_xref="GeneID:10486823" CDS complement(999868..1001268) /locus_tag="B565_0906" /codon_start=1 /transl_table=11 /product="TldD protein" /protein_id="YP_004391558.1" /db_xref="GI:330828606" /db_xref="GeneID:10486823" /translation="MTPFSLLAPAIARDVLDHALALGADFAELFVERKRRSQLSLLSS QIENISGGLDFGIGVRLCYGHKVLYGYTNLASRDELLRIVTLLAAKDRRDPVVTATAF DFTRLSDRNPVALPLSADKLLEQKIAYLHAMDAAARAESDKVSQFSGNVLGWEQEVEI FNSEGLQVADRRHYNRIMAQTIAMEGSEQSVGYEAPGALMGWEHADRIDPRELALTAT RQALVKLGAVPCPSGTLPVIMENGFGGVIFHEACGHLLETTSVAKKASVFHDKMGQLI ANPVVNAVDEGLQGNAWGSINVDDEGMATQHTQLIKDGVLTGFLVDRMGALKTGYART GSGRRESYKYAPTSRMRNTYIEPGNHSLDDMLATVEHGIYAKKMGGGSVQPGTGEFNF NVQEAYLIEHGKITKPLKSATLIGTGPQVLKEISMVGRNLALAAGMCGSVSGSVPTSV GQPALKVDNILVGGNA" misc_feature complement(999874..1001244) /locus_tag="B565_0906" /note="Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]; Region: TldD; cl00398" /db_xref="CDD:193802" misc_feature complement(1000312..1001196) /locus_tag="B565_0906" /note="Putative modulator of DNA gyrase; Region: PmbA_TldD; pfam01523" /db_xref="CDD:190021" gene complement(1001471..1001989) /locus_tag="B565_0907" /db_xref="GeneID:10486824" CDS complement(1001471..1001989) /locus_tag="B565_0907" /codon_start=1 /transl_table=11 /product="Flavodoxin 2" /protein_id="YP_004391559.1" /db_xref="GI:330828607" /db_xref="GeneID:10486824" /translation="MKIGLFYGSTTCYTEMAAEKIRALIGPELVDIHNIKDVSLRRME DYEILILGISTWDFGELQEDWESRWEDIADLHLEGRIVALFGLGDQLGYGEWFQDALG MLHDQLVPKGVKLVGYWPNEGYEFDASKALIDDGRHFVGLALDDANQYDQTDPRIEQW VEQILSEIHALL" misc_feature complement(1001474..1001989) /locus_tag="B565_0907" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:193819" gene 1002228..1003139 /locus_tag="B565_0908" /db_xref="GeneID:10486825" CDS 1002228..1003139 /locus_tag="B565_0908" /codon_start=1 /transl_table=11 /product="Tyrosine recombinase XerD" /protein_id="YP_004391560.1" /db_xref="GI:330828608" /db_xref="GeneID:10486825" /translation="MQRTMSKPDPHPLIEPFLDALWLERGLSDNTVSSYRSDLEKFSL WLDEQGSSLLLAGMDEIQHYLAWRVDHQFAASSTARFLSALRRFYQYLNREKLRSDDP TVLLEGPKLPKKLPSDLSETEVEALLSAPLVDDPLELRDKAMLELLYATGLRVSELVG LTAEHVSLRQGLVRVVGKGNKERLVPMGEEAMHWLERYYREARTLLLGGTSSDVVFPS KQARMMTRQTFWHRIKLYALRAGINGELSPHTLRHAFATHLLNHGADLRVVQMLLGHA DLSTTQIYTHVANERLKALHGEHHPRA" misc_feature 1002258..1003136 /locus_tag="B565_0908" /note="site-specific tyrosine recombinase XerD; Reviewed; Region: xerD; PRK00283" /db_xref="CDD:178959" misc_feature 1002267..1003115 /locus_tag="B565_0908" /note="N- and C-terminal domains. XerD-like integrases are involved in the site-specific integration and excision of lysogenic bacteriophage genomes, transposition of conjugative transposons, termination of chromosomal replication, and stable plasmid...; Region: INT_XerDC; cd00798" /db_xref="CDD:29499" misc_feature order(1002687..1002689,1002759..1002761,1002972..1002974, 1002981..1002983,1003050..1003052,1003077..1003079) /locus_tag="B565_0908" /note="Int/Topo IB signature motif; other site" /db_xref="CDD:29499" misc_feature order(1002687..1002689,1002972..1002974,1002981..1002986, 1003077..1003079) /locus_tag="B565_0908" /note="active site" /db_xref="CDD:29499" gene complement(1003136..1004557) /locus_tag="B565_0909" /db_xref="GeneID:10486826" CDS complement(1003136..1004557) /locus_tag="B565_0909" /codon_start=1 /transl_table=11 /product="GGDEF domain-containing protein" /protein_id="YP_004391561.1" /db_xref="GI:330828609" /db_xref="GeneID:10486826" /translation="MQKNTLLSTARFFNDSTAQQWDNSLSSVERQINIIIADITENNG DLPPELKQRYRDIWQYLLYPDGPIKTVYYMLQDNKHINFSLHPTPIEFKESERPWYRN AIEHPGINIWSSPYIDAIEKMPVVTLSHAVFNNQGEFLGVIGIDLNLKVFSARIGRIL ESSNNVVYMLFDRGSKMIVAHSDPQENGSRLDQPWISELKGRNGTLMSKNGDLISYHA LHNNPSWLVITVFPFKSDILIGEILPTIFITLVLSLSIFTLVAIIFRQRLEHTISTLV QVVRQLRITPPGQQIIIPKLAGIEELEDEIVLISDKMQAETEKSLRDALTGLYNRRYL EEALATLHKENSQYILAIIDIDNFKKINDTYGHPIGDAVLKRTAQLGSQLLEEQATLC RFGGEELVAIFEQTDIASAQQLMEQWRISMGQQDWREKGLSVSFSGGITESLNDAPDS VIARADAALYQAKQAGKNRLQRA" misc_feature complement(1004009..1004224) /locus_tag="B565_0909" /note="Cache domain; Region: Cache_1; pfam02743" /db_xref="CDD:145738" misc_feature complement(1003145..1003597) /locus_tag="B565_0909" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(1003367..1003369,1003496..1003498)) /locus_tag="B565_0909" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(1003364..1003375,1003379..1003381, 1003445..1003447,1003457..1003459,1003469..1003474, 1003481..1003483)) /locus_tag="B565_0909" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(1003307..1003309,1003391..1003393)) /locus_tag="B565_0909" /note="I-site; other site" /db_xref="CDD:143635" gene complement(1004758..1005168) /locus_tag="B565_0910" /db_xref="GeneID:10486827" CDS complement(1004758..1005168) /locus_tag="B565_0910" /codon_start=1 /transl_table=11 /product="Large-conductance mechanosensitive channel" /protein_id="YP_004391562.1" /db_xref="GI:330828610" /db_xref="GeneID:10486827" /translation="MSLIQEFKAFAARGNVIDMAVGIIIGAAFGKIVSSFVGDVIMPP IGLILGGVDFSDLAVTLKAAEGTTPAVVIAYGKFIQTIIDFLIISFAIFMGLKAINTL KKKQEEEAAAPAGPTKDQELLTEIRDLLKSQQER" misc_feature complement(1004767..1005162) /locus_tag="B565_0910" /note="Large-conductance mechanosensitive channel, MscL; Region: MscL; cl00860" /db_xref="CDD:186226" gene 1005458..1006132 /locus_tag="B565_0911" /db_xref="GeneID:10486828" CDS 1005458..1006132 /locus_tag="B565_0911" /codon_start=1 /transl_table=11 /product="disulfide interchange protein DsbC" /protein_id="YP_004391563.1" /db_xref="GI:330828611" /db_xref="GeneID:10486828" /translation="MCTFAARAGMDTQALKQTITARLGVPVYLVEPTPIAGLYMLGTS QGVLYSDAKGDYVVQGVMLDMTRDMKNLTISGMREQRRLGLAQVAHAPIVLKARDERH RVALFLGEQDAKRRQLSGTLQHLQASGVSVALYPVIDHAERAADWCSDPLLQNDPLKA YLPQTACSETLIQNIGLSQWLGVKVLPAWVSSDGDLVRGYQSPEQLLKILDHIDVPAN PSSSAS" misc_feature 1005464..1006090 /locus_tag="B565_0911" /note="protein disulfide isomerase II DsbC; Provisional; Region: PRK10877" /db_xref="CDD:182802" misc_feature 1005530..1006087 /locus_tag="B565_0911" /note="DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide...; Region: DsbA_DsbC_DsbG; cd03020" /db_xref="CDD:48569" misc_feature order(1005530..1005556,1005563..1005646) /locus_tag="B565_0911" /note="dimerization domain [polypeptide binding]; other site" /db_xref="CDD:48569" misc_feature 1005623..1005646 /locus_tag="B565_0911" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48569" misc_feature order(1005791..1005793,1005800..1005802) /locus_tag="B565_0911" /note="catalytic residues [active]" /db_xref="CDD:48569" gene 1006098..1007828 /locus_tag="B565_0912" /db_xref="GeneID:10486829" CDS 1006098..1007828 /locus_tag="B565_0912" /codon_start=1 /transl_table=11 /product="Single-stranded-DNA-specific exonuclease RecJ" /protein_id="YP_004391564.1" /db_xref="GI:330828612" /db_xref="GeneID:10486829" /translation="MSLQIRRRPRVDDSHLPATLHPLLRQIFASRGVEDPALLERSAS QLLPPQRLYGMEQAVPLLAEALTAQKRILIVGDFDCDGATSSALCVLALRAMGGRHID FLVPNRFEFGYGLTPEIVELAVARGAEFLITVDNGISSIAGVAAAKAAGMQVLVTDHH LPGQELPDADAIVNPNQHGCDFPSKSLAGVGVAFYLMAALNTHLRQLGWFERQGLRAP NVADYLDLVALGTVADVVALDGNNRILVHQGLQRIRAGRCRPGIQALVDVSGRDGRRL TAADLGFALGPRLNAVGRLDDMSLGVACLLCDDLNLARQLAAEMDSLNQERKEIEQGM QQEALATLEQVRFRDGEVPSGIVLHRNEWHQGVVGLVASKVKEKYYRPVIAFAESSET ELKGSGRSIPGVHLRDALELLDTRHPGLMGKFGGHAMAAGLTLPKANIEAFGRAFEAV ISELVTPELLTGVLLTDGELLPDELNLELAELIRASGPWGQAFPEPLFDGEFVLVQQR LVGEKHLKMMLTTDSGHAVDAIAFGVDLKRWPDATVKRVRLVYRLDVNEWRGNRSVQL LVEHLEAAGL" misc_feature 1006098..1007816 /locus_tag="B565_0912" /note="ssDNA exonuclease RecJ; Provisional; Region: PRK11070" /db_xref="CDD:182944" misc_feature 1006290..1006793 /locus_tag="B565_0912" /note="DHH family; Region: DHH; pfam01368" /db_xref="CDD:189957" misc_feature 1007235..1007444 /locus_tag="B565_0912" /note="DHHA1 domain; Region: DHHA1; pfam02272" /db_xref="CDD:190268" gene 1007986..1009169 /locus_tag="B565_p002" /note="Methyltransferase" /pseudo /db_xref="GeneID:10486830" gene complement(1009237..1010781) /locus_tag="B565_0913" /db_xref="GeneID:10489947" CDS complement(1009237..1010781) /locus_tag="B565_0913" /codon_start=1 /transl_table=11 /product="Apolipoprotein N-acyltransferase" /protein_id="YP_004391565.1" /db_xref="GI:330828613" /db_xref="GeneID:10489947" /translation="MRLSPVTSKILLSLSALASGAIAVLAFSPFGYWPLVIPSLLGLY ALLDKATPKQAAWRGFGYAMGLFLPGLWWIHVSMTEFGGIPLPVAFVLLAGLSAYLAL YPTLACWIFARFFGGRHWSRWLLAFPALWLVADWLRGWVMTGFPWLWFGYSQIDGPLK GFAPILGVQGITLALLFSASAIWLVWKSRSPLWLAVPALLAAGAHGLMQLNWVTRGEP VKVALVQGNIAQSLKWDPEALAPTVRTYQDLSRENQDADIIVWPESAIPAIEKAMGPY LENLDKAMKVNDTGLLAGIIHYDEQQQRFYNTVLGMGVQDADGKESYFYNHSNRYNKY HLLPIGEFVPFEDLLRPIAPFFNLPMSSFSRGDEVQPNLIAKGLKFAAAICYEIIFPE EVRRNVNTDTDFLLTVSNDAWFGTSIGPWQHMEIARMRALELARPLLRDTNTGITIVT EIDGSIIGQIPQFEAGVLRSEVRPAHGETPYMRFGSWPLYGLTVLLLGLALALRPKAH PWAREL" misc_feature complement(1009318..1010703) /locus_tag="B565_0913" /note="apolipoprotein N-acyltransferase; Reviewed; Region: lnt; PRK00302" /db_xref="CDD:178970" misc_feature complement(1009318..1010127) /locus_tag="B565_0913" /note="Apolipoprotein N-acyl transferase (class 9 nitrilases); Region: ALP_N-acyl_transferase; cd07571" /db_xref="CDD:143595" misc_feature complement(order(1009552..1009554,1009615..1009620, 1009624..1009629,1009759..1009761,1009771..1009773, 1009783..1009785,1009993..1009995)) /locus_tag="B565_0913" /note="putative active site [active]" /db_xref="CDD:143595" misc_feature complement(order(1009627..1009629,1009783..1009785, 1009993..1009995)) /locus_tag="B565_0913" /note="catalytic triad [active]" /db_xref="CDD:143595" misc_feature complement(order(1009318..1009320,1009444..1009449, 1009483..1009488,1009492..1009500,1009504..1009509, 1009594..1009599,1009606..1009620,1009624..1009626, 1009735..1009743,1009762..1009764,1009771..1009782)) /locus_tag="B565_0913" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:143595" gene complement(1010930..1011814) /locus_tag="B565_0914" /db_xref="GeneID:10486831" CDS complement(1010930..1011814) /locus_tag="B565_0914" /codon_start=1 /transl_table=11 /product="Magnesium and cobalt efflux protein CorC" /protein_id="YP_004391566.1" /db_xref="GI:330828614" /db_xref="GeneID:10486831" /translation="MTDDHPSTGSPKKTWLDKLSQLFQGEPKDRNDLVDVIADAEERD LIDQDTKDMIEGVLEIADLRVRDIMIPRSQMVTIEKSQPVDAILPVIIESGHSRFPVI NEDKDHVEGILLAKDLLPFGFGGHHASEPLQLEKILRPTVIVPESKRVDRLLKEFREE RYHMAIVVDEFGGVSGLVTIEDILELIVGEIDDEFDDIEDEPDEIRRLSKRVFSISAL TEIEDFNDFFGTKFSDEEVDTVGGLVMHAFSHLPKKGEEIELDGYLFKVMHADRRRLQ QLQVKIPEHHAAAQSEPQ" misc_feature complement(1010963..1011814) /locus_tag="B565_0914" /note="magnesium/cobalt efflux protein CorC; Provisional; Region: PRK15094" /db_xref="CDD:185050" misc_feature complement(1011260..1011598) /locus_tag="B565_0914" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the CorC_HlyC domain. CorC_HlyC is a transporter associated domain. This small domain is found in Na+/H+ antiporters, in proteins involved in...; Region: CBS_pair_CorC_HlyC_assoc; cd04590" /db_xref="CDD:73090" misc_feature complement(1010966..1011199) /locus_tag="B565_0914" /note="Transporter associated domain; Region: CorC_HlyC; pfam03471" /db_xref="CDD:190650" gene complement(1011910..1012374) /locus_tag="B565_0915" /db_xref="GeneID:10486832" CDS complement(1011910..1012374) /locus_tag="B565_0915" /codon_start=1 /transl_table=11 /product="metalloprotease" /protein_id="YP_004391567.1" /db_xref="GI:330828615" /db_xref="GeneID:10486832" /translation="MSVTLDLQLASASTDGLPTEAQLQGWLDGTILGFQQEAEVTVRI VDEAESNELNLTYRGKDKPTNVLSFPFEAPPGLELPLLGDLVICRQVVEREAEEQGKP LMAHWAHMVVHGSLHLLGYDHIEDEEAEEMEALERDIMQELGFADPYLNDEE" misc_feature complement(1011925..1012359) /locus_tag="B565_0915" /note="Uncharacterized protein family UPF0054; Region: UPF0054; cl00402" /db_xref="CDD:185971" gene complement(1012371..1013420) /locus_tag="B565_0916" /db_xref="GeneID:10486833" CDS complement(1012371..1013420) /locus_tag="B565_0916" /codon_start=1 /transl_table=11 /product="PhoH-like protein YbeZ" /protein_id="YP_004391568.1" /db_xref="GI:330828616" /db_xref="GeneID:10486833" /translation="MSRHISTLNLHLEPADNQRLASLCGPFDDNIKQLERRLGVEISY RDSHFQLVGKPAQLDAAAVILKHLYVETQPLKGGKVTDITPDMVHLAIQESRVLEQDD EPAPSIPYGKEVTVKTKRGLIKPRSPNQAQYIANIVRHDICFGIGPAGTGKTYLAVAA AVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFERVE KLMERNIIEVAPLAYMRGRTLNDAFIILDEAQNTTTEQMKMFLTRIGFNSKAVVTGDI TQVDLPRNAKSGLRHALEVLPGVDGLSFNFFESKDVVRHPVVARIVQAYEAFDAKQAA EKVAGQTNSSKESEQ" misc_feature complement(1012431..1013420) /locus_tag="B565_0916" /note="Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]; Region: PhoH; COG1702" /db_xref="CDD:31888" misc_feature complement(1012443..1013054) /locus_tag="B565_0916" /note="PhoH-like protein; Region: PhoH; cl12134" /db_xref="CDD:196351" gene complement(1013475..1014908) /locus_tag="B565_0917" /db_xref="GeneID:10486834" CDS complement(1013475..1014908) /locus_tag="B565_0917" /codon_start=1 /transl_table=11 /product="tRNA methylthiotransferase" /protein_id="YP_004391569.1" /db_xref="GI:330828617" /db_xref="GeneID:10486834" /translation="MSKKLHIKTWGCQMNEYDSSKMADLLDASNGYTLTEEPEEADVL LLNTCSIREKAQEKVFHQLGRWKKLKANKPGLVIGVGGCVASQEGDAIRQRAPYVDIV FGPQTLHRLPAMIKEVQEGRGAQVDIAFPEIEKFDSLPEPRAEGATAFVSIMEGCSKY CTYCVVPYTRGEEVSRPLDDVLYEIAQLAQQGVREVNLLGQNVNAYRGPTFDGGICTF AELLRLVAAIDGIDRIRYTTSHPIEFTDDIIEVYKDTPEVVSFLHLPVQSGSDRILTM MKRPHTILEYKSKIRRLRAARPDITISSDFIVGFPNETDEDFEATMKLIEDVGFDMSF SFIFSPRPGTPAADMPDDVDMEVKKARLARLQHVINNQAMQIGRAMLGTTQRILVEGP SKLDPMQLCGRTENNRVVNFEGQHTLIGGFADVEITEVRPNSLRGKFIRGESEMNLRI ATAPSEILARRPDNVPDELGVAAFTPH" misc_feature complement(1013574..1014908) /locus_tag="B565_0917" /note="(dimethylallyl)adenosine tRNA methylthiotransferase; Provisional; Region: PRK14325" /db_xref="CDD:184622" misc_feature complement(1014597..1014899) /locus_tag="B565_0917" /note="Uncharacterized protein family UPF0004; Region: UPF0004; pfam00919" /db_xref="CDD:189770" misc_feature complement(1013841..1014443) /locus_tag="B565_0917" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(1013895..1013897,1013988..1013990, 1014114..1014116,1014192..1014200,1014303..1014308, 1014312..1014314,1014414..1014422,1014426..1014428, 1014432..1014434,1014438..1014440)) /locus_tag="B565_0917" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" misc_feature complement(1013589..1013777) /locus_tag="B565_0917" /note="TRAM domain; Region: TRAM; cl01282" /db_xref="CDD:120537" gene 1015174..1016337 /locus_tag="B565_0918" /db_xref="GeneID:10486835" CDS 1015174..1016337 /locus_tag="B565_0918" /codon_start=1 /transl_table=11 /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase" /protein_id="YP_004391570.1" /db_xref="GI:330828618" /db_xref="GeneID:10486835" /translation="MEQCDIAIVGAGMVGAATACLLAAQGLSVRVIETQLPEHYAPEQ PLDLRVSAISQASVALLEQAGAWHHLQQMRLCPYRRLETWELDGFATRFNSADLGLPQ LGYIIENRLVQLALLKRMEDFPTIQTHTPAVVTSLRQSADEAVLTLDDGTELAARWVL ACDGAESHTRKLAGIGVSRFEYRQHCMLINIDTDFAQEDITWQQFTPSGPRAFLPLPG QHGSLVWYDSPARIRALAAMSNEGLAAEVRRHFPSRLGGFTVTGKGSFPLVRRHANDY HAGRVVLLGDAAHTINPLAGQGVNLGFKDVACWADLLQGAGADWHQLALAERYERRRR PDNLLMQSGMDLFYGVFSNEIGPLKLARNLALNLADKAGPLKEMALRYALGLV" misc_feature 1015237..1016331 /locus_tag="B565_0918" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 1015237..1016331 /locus_tag="B565_0918" /note="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed; Region: ubiF; PRK08020" /db_xref="CDD:181199" gene 1016387..1016953 /locus_tag="B565_0919" /db_xref="GeneID:10486836" CDS 1016387..1016953 /locus_tag="B565_0919" /codon_start=1 /transl_table=11 /product="isochorismatase family protein" /protein_id="YP_004391571.1" /db_xref="GI:330828619" /db_xref="GeneID:10486836" /translation="MNKALLVIDFINDIAHPDGRIAASAAHVLEQDAIAHANQALAHA RANGWLVVLIKVGFDGGYQLQPKGSPMFGRAHQLGALSLADSGTDFHPDLDVQPGDLV LTKPRVSPFYGTALEPALRANHIDHLYLCGVSTSWAIQAAARDGHDRDYAITILEDAC AAADATEHHTSLRMLGRIAEIIKVSQLA" misc_feature 1016396..1016911 /locus_tag="B565_0919" /note="Isochorismatase family; Region: Isochorismatase; pfam00857" /db_xref="CDD:189743" misc_feature 1016396..1016911 /locus_tag="B565_0919" /note="Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It...; Region: cysteine_hydrolases; cd00431" /db_xref="CDD:29548" misc_feature order(1016411..1016413,1016699..1016701,1016798..1016800) /locus_tag="B565_0919" /note="catalytic triad [active]" /db_xref="CDD:29548" misc_feature 1016783..1016788 /locus_tag="B565_0919" /note="conserved cis-peptide bond; other site" /db_xref="CDD:29548" gene 1017086..1018024 /locus_tag="B565_0920" /db_xref="GeneID:10486837" CDS 1017086..1018024 /locus_tag="B565_0920" /codon_start=1 /transl_table=11 /product="GGDEF domain-containing protein" /protein_id="YP_004391572.1" /db_xref="GI:330828620" /db_xref="GeneID:10486837" /translation="MADDIQTRQSYFAERAHHLAALLDSLEDQISVIDRDGVIHYTNL AWDLFAEQNGMPKGYNWIGVNYMGACDAEAEPSGLAAVEGILRVIRHQQEKFYLEYPC HSPDTQRWFMMRVAPVPGLDAEYFSIAHINITERKLLELEVASLSQHDPLTGLANRRL FNSFLHNEWRRSMREHTPLSLIMLDLDNFKACNDHLGHQMGDGSLQLVGHLLQSFCQR PADLPCRFGGDEFALILGNTDRDAAQRIGEEIRQAINDLDIVVANNIQLSASIGIATY TAEQLVEGEGALLAAADAALYCAKGAGKNRSHCASC" misc_feature 1017137..1017511 /locus_tag="B565_0920" /note="PAS domain S-box; Region: sensory_box; TIGR00229" /db_xref="CDD:161776" misc_feature 1017527..1017913 /locus_tag="B565_0920" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(1017638..1017640,1017770..1017772) /locus_tag="B565_0920" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(1017653..1017655,1017662..1017667,1017677..1017679, 1017689..1017691,1017758..1017760,1017764..1017775) /locus_tag="B565_0920" /note="active site" /db_xref="CDD:143635" misc_feature order(1017746..1017748,1017830..1017832) /locus_tag="B565_0920" /note="I-site; other site" /db_xref="CDD:143635" gene complement(1018117..1019025) /locus_tag="B565_0921" /db_xref="GeneID:10486838" CDS complement(1018117..1019025) /locus_tag="B565_0921" /codon_start=1 /transl_table=11 /product="Isoleucine biosynthesis transcriptional activator" /protein_id="YP_004391573.1" /db_xref="GI:330828621" /db_xref="GeneID:10486838" /translation="MKFDLRQLQAFVTLADTANYREAASRLFITQPALTKQIQGLEQT LGCTLFKRGRHGAELTALGAQLLTQASALVKHGREFERHALAVASGVAGRLKIGFGLS SFALAPALVARFKQQVTDVMVHLQDMPSAIQQEQLLSGQLQLGFMRRPQMPQLQEHRL LIDRLVLAVPTRMTEPDPAAFDVQQALTSQPLLQMVGHRCPGLSQQIAGFLGANRLTG MVQEAEDIQTLVALVAAGIGNAILPRSVSFIAGPDVTLYPLSGPSSEWEVSMVWNPDF ADPIRDHFVRQVIASHPLPVSATPER" misc_feature complement(1018150..1019019) /locus_tag="B565_0921" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature complement(1018861..1019013) /locus_tag="B565_0921" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(1018162..1018746) /locus_tag="B565_0921" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold; Region: PBP2_LTTR_aromatics_like; cd08414" /db_xref="CDD:176106" misc_feature complement(order(1018267..1018269,1018321..1018326, 1018330..1018335,1018351..1018356,1018408..1018413, 1018516..1018518,1018645..1018647,1018651..1018653, 1018657..1018659,1018681..1018683,1018690..1018695, 1018699..1018704,1018729..1018731)) /locus_tag="B565_0921" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176106" misc_feature complement(order(1018417..1018419,1018438..1018443, 1018582..1018584,1018726..1018728)) /locus_tag="B565_0921" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176106" gene 1019142..1019387 /locus_tag="B565_0922" /db_xref="GeneID:10486839" CDS 1019142..1019387 /locus_tag="B565_0922" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391574.1" /db_xref="GI:330828622" /db_xref="GeneID:10486839" /translation="MSTQRYLFLIKGKLVLAQPLAAPETGELLASLLQQGFVVGPLQV WAGSAEQALACYERAAQQQAFADALSGSLPELAGVSV" gene 1019396..1020067 /locus_tag="B565_0923" /db_xref="GeneID:10486840" CDS 1019396..1020067 /locus_tag="B565_0923" /codon_start=1 /transl_table=11 /product="phosphatase YfbT" /protein_id="YP_004391575.1" /db_xref="GI:330828623" /db_xref="GeneID:10486840" /translation="MNACMSAGINTITLSVSALLLDMDGTLVCSTGDVEKVWRLWCQH HQLAPEPVLAMCHGMRSREVIRALAPQLDVEREAARLDELEMLHTGGDAIFGAGELLR RLPPERWAIVTSASQRVARHRLSCAGLPLPHVLVGAEAVINGKPDPEPYLLGAERLGV SPDRCLVFEDAPAGIESALRAGCTVVQVGGDAPLNPAVVAVIRDWREVKVEIGETSLL VTLPA" misc_feature 1019447..1020037 /locus_tag="B565_0923" /note="Predicted phosphatase/phosphohexomutase [General function prediction only]; Region: COG0637" /db_xref="CDD:30982" misc_feature 1019447..1019959 /locus_tag="B565_0923" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature order(1019459..1019467,1019660..1019665) /locus_tag="B565_0923" /note="active site" /db_xref="CDD:119389" misc_feature 1019459..1019476 /locus_tag="B565_0923" /note="motif I; other site" /db_xref="CDD:119389" misc_feature 1019660..1019662 /locus_tag="B565_0923" /note="motif II; other site" /db_xref="CDD:119389" gene complement(1020178..1020780) /locus_tag="B565_0924" /db_xref="GeneID:10486841" CDS complement(1020178..1020780) /locus_tag="B565_0924" /codon_start=1 /transl_table=11 /product="Nitroreductase family protein" /protein_id="YP_004391576.1" /db_xref="GI:330828624" /db_xref="GeneID:10486841" /translation="MSSPFIEQIKARRTIYALGDQVSHTPEQLTALIQDAIRHSPSSF NSQSSRAVILFGAQHHKLWDIVKAELKKIVPPEAYAQSEAKVDGSFRAGFGTVLFFED TDVIKDLQQKFALYADNFPIWSEHATGIAQFAVWTTLAQEKVGASLQHYNPLIDEAVR KEWNLPASWLLRAQMPFGSIKQPAGDKTFIDDATRFRVFK" misc_feature complement(1020190..1020768) /locus_tag="B565_0924" /note="Nitroreductase-like family 4. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and...; Region: Nitroreductase_4; cd02140" /db_xref="CDD:48387" misc_feature complement(order(1020190..1020198,1020205..1020207, 1020211..1020219,1020292..1020294,1020331..1020333, 1020358..1020360,1020379..1020384,1020391..1020393, 1020403..1020408,1020412..1020414,1020607..1020609, 1020616..1020636,1020640..1020642,1020646..1020648, 1020658..1020660,1020664..1020669,1020673..1020675, 1020679..1020681,1020703..1020705,1020745..1020747, 1020751..1020756,1020766..1020768)) /locus_tag="B565_0924" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48387" misc_feature complement(order(1020220..1020222,1020331..1020339, 1020733..1020735,1020739..1020747)) /locus_tag="B565_0924" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:48387" gene 1021268..1021750 /locus_tag="B565_0925" /db_xref="GeneID:10486842" CDS 1021268..1021750 /locus_tag="B565_0925" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391577.1" /db_xref="GI:330828625" /db_xref="GeneID:10486842" /translation="MEMNSRALRALALLGALLAGSTTVHASETLNTILGGGAGGVAGT MIGKELGGDTGALVGAALGGAAGGAATANKGNKNEAALGGAVGALGGAAIGKSVGGDT GQLIGAGVGGASGSAIGAKTGDGHKSQDRYYDDDDDHHHHKHHKKYKKHKKHRWHDDD " gene complement(1021831..1022787) /locus_tag="B565_0926" /db_xref="GeneID:10486843" CDS complement(1021831..1022787) /locus_tag="B565_0926" /codon_start=1 /transl_table=11 /product="2-hydroxyacid dehydrogenase family protein" /protein_id="YP_004391578.1" /db_xref="GI:330828626" /db_xref="GeneID:10486843" /translation="MQQIVFLDSDTLDAGITLHHPDFPHHWQSYPSTAPEQVVERLKD ASIAIINKVRIGAAELAQLPELKLIALAATGSDNVDLEACRAANVGVCNIRNYSGPSV PEHAMALMLALSRNLFCWRQSLLEGRWQQSGQFCFFDHNIMDLHGKQLGIIGKGTLGQ ALGERAKGMGMTVRYAQSQVGASHDEDRLPLDELLQSSDVISLHCPLTPYTRNLIGER ELDLMKPGALLINVGRGGLVDEEALLQALANGRLGGAGFDVASVEPPPPDHPLMKALQ YPHFILTPHVAWASEESMQRLADQLIDNINAFAAGRRQHRLV" misc_feature complement(1021852..1022781) /locus_tag="B565_0926" /note="glycerate dehydrogenase; Provisional; Region: PRK06487" /db_xref="CDD:180588" misc_feature complement(1021927..1022469) /locus_tag="B565_0926" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene complement(1022934..1023698) /locus_tag="B565_0927" /db_xref="GeneID:10486844" CDS complement(1022934..1023698) /locus_tag="B565_0927" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391579.1" /db_xref="GI:330828627" /db_xref="GeneID:10486844" /translation="MARLSLSLLLLTLLAGHGAEASEVAPPVAEPMPLDHWQASDWKG LPDATQIDKQTVLFAKHDSENYLGLAILLPDWQRSGQLWQLTRALGRLGFDTLLLLPS PQQTELDPAAEKKAKNSDAFRKQFAERISKLADAKLQEGGFKLILAQGTGAAWTANLI ASEQLPAPDALVLLDGFFPNQQSNQTLAKQVAQAAIPTLDLYQEDGGRWPLLAAEARK SESRRSNKLNYRPYALMELEETPTRIQGWLNHLGWL" misc_feature complement(1022943..1023596) /locus_tag="B565_0927" /note="Protein of unknown function (DUF3530); Region: DUF3530; pfam12048" /db_xref="CDD:152483" gene complement(1023833..1024399) /locus_tag="B565_0928" /db_xref="GeneID:10486845" CDS complement(1023833..1024399) /locus_tag="B565_0928" /codon_start=1 /transl_table=11 /product="Elongation factor P" /protein_id="YP_004391580.1" /db_xref="GI:330828628" /db_xref="GeneID:10486845" /translation="MKTAQEIRAGNVVMIGTEPMVVQKAEFNKSGRNSAVVKMKLKGL LNGSATETVFKADDKLDVVQLERKECTYSYFSDPLYVFMDTEYNQYDVEKDNLGDVLN YLVDGMEDLCEVTFYNEKAISVELPTTIVREVEYTEPAARGDTSGKVTKPARLKGTTY ELAVAAFVEIGDKIEIDTRTGEFKRRVN" misc_feature complement(1023836..1024399) /locus_tag="B565_0928" /note="elongation factor P; Validated; Region: PRK00529" /db_xref="CDD:179058" misc_feature complement(1024220..1024393) /locus_tag="B565_0928" /note="Elongation factor P (EF-P) KOW-like domain; Region: EFP_N; pfam08207" /db_xref="CDD:191966" misc_feature complement(1024019..1024204) /locus_tag="B565_0928" /note="S1_EF-P_repeat_1: Translation elongation factor P (EF-P), S1-like RNA-binding domain, repeat 1. EF-P stimulates the peptidyltransferase activity in the prokaryotic 70S ribosome. EF-P enhances the synthesis of certain dipeptides with N-formylmethionyl-...; Region: S1_EF-P_repeat_1; cd04470" /db_xref="CDD:88435" misc_feature complement(order(1024037..1024042,1024055..1024057, 1024136..1024138)) /locus_tag="B565_0928" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88435" misc_feature complement(1023842..1024012) /locus_tag="B565_0928" /note="S1_EF-P_repeat_2: Translation elongation factor P (EF-P), S1-like RNA-binding domain, repeat 1. EF-P stimulates the peptidyltransferase activity in the prokaryotic 70S ribosome. EF-P enhances the synthesis of certain dipeptides with N-formylmethionyl-...; Region: S1_EF-P_repeat_2; cd05794" /db_xref="CDD:88469" misc_feature complement(order(1023851..1023856,1023869..1023871, 1023920..1023922)) /locus_tag="B565_0928" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88469" gene complement(1024445..1025641) /locus_tag="B565_0929" /db_xref="GeneID:10486846" CDS complement(1024445..1025641) /locus_tag="B565_0929" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391581.1" /db_xref="GI:330828629" /db_xref="GeneID:10486846" /translation="MTTPLPPFDWDIFCCVVDNFGDIGVTWRLARQLKREGNIAAHGD EVQVRLWVDDLASFARICPGLDPAQDGQWVDGIYIQHWHETLPSDMTPARVVIEAFAC ELPAPFIELMTSQPSPPCWINLEYLSAESWVEDCHGLASPQRVGNKSLNKYFFFPGFT AKTGGLLCERDLIAEREQWQQDDAGLAAYWASLDLPPKQENELRVSLFTYESDALKSL VERWCQSATPVTLLLPLGRSLNDVLTGAGLTDAIPAAKAEDLLHSGNLTIKLLPMTDQ AGYDRLLWSCDLNLVRGEDSFVRAQWAARPFLWHIYQQEEEAHLVKLEQFLDHYLADL PADCAQWLRSFNLALNRGEDCRELWAQWPQYSAIWQQHGRLWSQKLLRDGDLVTRLVK FLESRI" misc_feature complement(1024454..1025614) /locus_tag="B565_0929" /note="Uncharacterized protein conserved in bacteria (DUF2331); Region: DUF2331; cl01823" /db_xref="CDD:164000" gene complement(1025738..1026781) /locus_tag="B565_0930" /db_xref="GeneID:10486847" CDS complement(1025738..1026781) /locus_tag="B565_0930" /codon_start=1 /transl_table=11 /product="GMP reductase" /protein_id="YP_004391582.1" /db_xref="GI:330828630" /db_xref="GeneID:10486847" /translation="MRIEEDLKLGFKDVLFRPKRSTLKSRSQVSLTRQFTFKHTQTQW QGVPVIAANMDTVGSFAMARTLAGFEMMTAVHKHYSLEQWQAFVNETDPALLGHVMVS TGTSAEDFAKTRQILAMSEALRFICVDVANGYSEHFVEFVRKIREACPNHVILAGNVV TGEMVEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAIIECADAAHGLGGQIVG DGGCTCPGDVAKAFGGGADFVMLGGMLAAHEECGGEIVDVDGEPFMKFYGMSSSSAMD KHAGGVAEYRASEGKTVLLPYRGPVENAVRDILGGVRSTCTYVGASQLKELTKRTTFI RVREQENNVYGKE" misc_feature complement(1025744..1026781) /locus_tag="B565_0930" /note="guanosine 5'-monophosphate oxidoreductase; Provisional; Region: PRK05096" /db_xref="CDD:179935" misc_feature complement(1025774..1026757) /locus_tag="B565_0930" /note="IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the...; Region: IMPDH; cd00381" /db_xref="CDD:73364" misc_feature complement(order(1025912..1025917,1025972..1025980, 1025984..1025986,1026053..1026058,1026119..1026121, 1026125..1026127,1026224..1026232,1026626..1026628)) /locus_tag="B565_0930" /note="active site" /db_xref="CDD:73364" gene 1027163..1027657 /locus_tag="B565_0931" /db_xref="GeneID:10486848" CDS 1027163..1027657 /locus_tag="B565_0931" /codon_start=1 /transl_table=11 /product="ATP-dependent Zn protease" /protein_id="YP_004391583.1" /db_xref="GI:330828631" /db_xref="GeneID:10486848" /translation="MGKMMVGITLMLALCGSALAETPTSYGWIEKGLILPTGVAVKMK LDTGALTSSLDARAITRFKRGGKPWVRFMLVVTDADSGKLVKQQFERRVERSVTVRGA GGMELRPTVTMSICLGDKVYEEWFTLRDRSKMIYPVLLGRRLLAELGPVDSSRTFTVQ PDCH" misc_feature 1027211..1027648 /locus_tag="B565_0931" /note="Protein of unknown function (DUF785); Region: DUF785; cl01682" /db_xref="CDD:120816" gene complement(1027696..1029132) /locus_tag="B565_0932" /db_xref="GeneID:10486849" CDS complement(1027696..1029132) /locus_tag="B565_0932" /codon_start=1 /transl_table=11 /product="two-component system sensor histidine kinase" /protein_id="YP_004391584.1" /db_xref="GI:330828632" /db_xref="GeneID:10486849" /translation="MKRPRSIRRFLLTGILTLVSLSLTISAFIGYMEASHEMEELFDA RLAQSARITNQLLARYMAQQGQLPANGTVYQEWEAQNPDEWQKDPSLNLTGEDREITP YGHEFERNLYFQLLDEKGGLLLRAPSAPDQPLVTLAIGFDTVEKDNHQWRTFTLYNQQ EQTWLVVAERDDERSELASKMATLTMLPLLITLPFLLALLWWLITRGLAPLRQLAQAI SERHPANLSPLSLKISAQELTPLTNEINRLMQALAETIEREKQFTNEAAHELRTPLAV LRIHSENALAAEDEVSRQQSLHKMLQALDRSDRLIRQLLTQARIDNQQGLVLTELEVG HLLQGTLATLAPIALKKDQQLSLECELPLLVMGQATLLELLFSNLIDNALRYTQPEGE IRVRVQQEGNRVRVDVSDNGPGIPASALPRLYERFFRVNPQQGDGVGLGMAIVSRIAQ LHGADLDVHNRPEGGLEVKVLLPLPPAR" misc_feature complement(1027699..1028412) /locus_tag="B565_0932" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: COG3920" /db_xref="CDD:33706" misc_feature complement(1028176..1028367) /locus_tag="B565_0932" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature complement(order(1028191..1028193,1028203..1028205, 1028212..1028214,1028224..1028226,1028233..1028235, 1028245..1028247,1028293..1028295,1028302..1028304, 1028314..1028316,1028323..1028325,1028335..1028337, 1028347..1028349)) /locus_tag="B565_0932" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature complement(1028329..1028331) /locus_tag="B565_0932" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature complement(1027717..1028019) /locus_tag="B565_0932" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(1027729..1027731,1027735..1027740, 1027753..1027755,1027759..1027761,1027807..1027818, 1027888..1027893,1027897..1027899,1027903..1027905, 1027909..1027911,1027978..1027980,1027987..1027989, 1027999..1028001)) /locus_tag="B565_0932" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(1027987..1027989) /locus_tag="B565_0932" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(1027810..1027812,1027816..1027818, 1027891..1027893,1027897..1027899)) /locus_tag="B565_0932" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(1029129..1029815) /locus_tag="B565_0933" /db_xref="GeneID:10486850" CDS complement(1029129..1029815) /locus_tag="B565_0933" /codon_start=1 /transl_table=11 /product="two-component system response regulator" /protein_id="YP_004391585.1" /db_xref="GI:330828633" /db_xref="GeneID:10486850" /translation="MRILLVEDDVMLGDGMQDALRHSGYTVDWLQQGLPALAALKSDE FAALILDLNLPDIDGLSLLRKLRREGHQLPVLILTARDALDDRVVGLDAGSDDYMVKP FALQELNARLRALVRRSKGQAQAVLEYGDILIYPESQQVTYQGEAVKLTPHEYKLLQE LISQSGRVLSKDQLQQSLYGWDEGAESNAVEVHIHHLRKKFYSDLIRNIRGVGYIIPQ LEQPSRTPAR" misc_feature complement(1029150..1029815) /locus_tag="B565_0933" /note="DNA-binding transcriptional regulator BasR; Provisional; Region: PRK10643" /db_xref="CDD:182612" misc_feature complement(1029468..1029806) /locus_tag="B565_0933" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(1029510..1029515,1029522..1029524, 1029579..1029581,1029639..1029641,1029663..1029665, 1029792..1029797)) /locus_tag="B565_0933" /note="active site" /db_xref="CDD:29071" misc_feature complement(1029663..1029665) /locus_tag="B565_0933" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(1029639..1029647,1029651..1029656)) /locus_tag="B565_0933" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(1029507..1029515) /locus_tag="B565_0933" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(1029168..1029437) /locus_tag="B565_0933" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cd00383" /db_xref="CDD:29475" misc_feature complement(order(1029177..1029179,1029192..1029194, 1029213..1029218,1029240..1029242,1029249..1029251, 1029303..1029308,1029363..1029365)) /locus_tag="B565_0933" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29475" gene complement(1029946..1030578) /locus_tag="B565_0934" /db_xref="GeneID:10486851" CDS complement(1029946..1030578) /locus_tag="B565_0934" /codon_start=1 /transl_table=11 /product="TPR repeats containing protein" /protein_id="YP_004391586.1" /db_xref="GI:330828634" /db_xref="GeneID:10486851" /translation="MNFFRQSVTSCAIAILLGSTSVMAADDALIPIQQQWAVCQYQQS GKAKESCLETLSTQAEAASAKEPFRADLLIWSAIVKSTWAGAKGGLGALALVKEAKAK LELALKQDPKALDGSAYTSLGSLYYQVPGWPVGFGDDEKAEQLLKQALAINPDGIDPN FFYGDFLLDQGRKAEAKTYLDKALAAPARPGREVADEGRRMEIRDRLAKL" misc_feature complement(1030024..>1030236) /locus_tag="B565_0934" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cl02429" /db_xref="CDD:194311" misc_feature complement(order(1030069..1030074,1030081..1030086, 1030093..1030098,1030195..1030200,1030207..1030212, 1030216..1030221)) /locus_tag="B565_0934" /note="binding surface" /db_xref="CDD:29151" misc_feature complement(order(1030030..1030032,1030039..1030041, 1030051..1030053,1030087..1030089,1030132..1030134, 1030141..1030143,1030153..1030155,1030210..1030212)) /locus_tag="B565_0934" /note="TPR motif; other site" /db_xref="CDD:29151" gene complement(1030580..1031428) /locus_tag="B565_0935" /db_xref="GeneID:10486852" CDS complement(1030580..1031428) /locus_tag="B565_0935" /codon_start=1 /transl_table=11 /product="short chain dehydrogenase/reductase family oxidoreductase" /protein_id="YP_004391587.1" /db_xref="GI:330828635" /db_xref="GeneID:10486852" /translation="MLLTGASGGIGEELAQELAAQGAHLLLHGRRGPALERLCKSLPH PERHQVVLADLGSAQERAKLLQHPALEDGIDILINNAGCNQFAWLEDQSFEQVERQLL LNIEAPIQLTRALLPTMRKPGIIMNMGSSLGSIGYPGYSVYCASKFALRGFSEALGRE LEGSGIKVLHFAPRATRTKLNSEAAYEMNAALGTQTDSPQEVAEEAVIALCNETRRSW LGWPEKLFVRLNALLPSIVDKALARQLPIIKRYARHLQPGTADAGANSAPQPDLSRPI PTKKEH" misc_feature complement(1030694..1031425) /locus_tag="B565_0935" /note="Short-chain dehydrogenases of various substrate specificities [General function prediction only]; Region: DltE; COG0300" /db_xref="CDD:30648" misc_feature complement(1030712..1031425) /locus_tag="B565_0935" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(order(1030901..1030912,1030988..1030990, 1031000..1031002,1031039..1031047,1031183..1031191, 1031336..1031344,1031399..1031401,1031405..1031410, 1031414..1031416)) /locus_tag="B565_0935" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature complement(order(1030988..1030990,1031000..1031002, 1031039..1031041,1031117..1031119)) /locus_tag="B565_0935" /note="active site" /db_xref="CDD:187535" gene complement(1031484..1032137) /locus_tag="B565_0936" /db_xref="GeneID:10486853" CDS complement(1031484..1032137) /locus_tag="B565_0936" /codon_start=1 /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_004391588.1" /db_xref="GI:330828636" /db_xref="GeneID:10486853" /translation="MSFYQTLQQATAQEREHLFNAPIIEACRRGDISRDTYLAFLAQA YYHVRHTVPLLMATGGKLGQEYEWVRGAIAEYIDEEYGHQEWILNDIRACGGDAEAVR HGQPGLPIELMVAFLYDQIQRGNPMGFFGMVQVLEGTSVAIALTVADQLKKGLGLPPQ AMSYLSSHGALDQEHLKFFESLMDKVESPADQAAIIHGAKVVYRLYGEMLYNLTATP" misc_feature complement(1031508..1032134) /locus_tag="B565_0936" /note="Heme oxygenase catalyzes the rate limiting step in the degradation of heme to bilirubin, it is essential for recycling of iron from heme. Heme is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This...; Region: HemeO; cd00232" /db_xref="CDD:29310" misc_feature complement(order(1031529..1031531,1031610..1031612, 1031697..1031699,1031709..1031711,1031736..1031738, 1032093..1032095,1032105..1032107,1032114..1032116)) /locus_tag="B565_0936" /note="heme binding pocket [chemical binding]; other site" /db_xref="CDD:29310" misc_feature complement(1032093..1032095) /locus_tag="B565_0936" /note="heme ligand [chemical binding]; other site" /db_xref="CDD:29310" gene complement(1032134..1033630) /locus_tag="B565_0937" /db_xref="GeneID:10486854" CDS complement(1032134..1033630) /locus_tag="B565_0937" /codon_start=1 /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_004391589.1" /db_xref="GI:330828637" /db_xref="GeneID:10486854" /translation="MSLFDAIAKHAHEDPQSPALLNSQQRLDYQTLWQQIQRLASQLQ QLDISRLALQLDNGLPWALLDLACTRAGIVVIPVPHFFSQAQQAWLLESSGADALVGP HHQGWHAAEPLSLITGELPLWRYIPANRPALPKGTAKITYTSGTTGQPKGVCLSLTQM MAVSHALAERVAPAKVEKHLTLLPLATLLENITGLYVPLLTGACSRIPSLGELGFTGS SSLNPAMLGEALLRWPTHSLVLVPELLRLLLALCTSTPTLAQQLKSLRFIAVGGGKVA PDLIKHARQLGLPVYEGYGLSECGSVVALNSPDADKLGSVGRPLPHCQVTIASDGEIM VSGSAMLGYLGSNEPTPEQIATGEPSAMQIATGDQGHLDEEGYLHITGRKKNVQITAF GRNFSPEWVEAEAQLCPAIARIVVFGDGQPANVALIQPLPGKEADLPRQIAGLNQRLP DYARLHHWLPVVLDQHPGLLTANGRPRRSEIYQHFSRQISQCLTGESS" misc_feature complement(1032260..1033630) /locus_tag="B565_0937" /note="Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]; Region: FAA1; COG1022" /db_xref="CDD:31225" misc_feature complement(1032248..>1032859) /locus_tag="B565_0937" /note="Acyl-protein synthetase, LuxE; Region: LuxE; cl10450" /db_xref="CDD:186997" gene complement(1033627..1034301) /locus_tag="B565_0938" /db_xref="GeneID:10486855" CDS complement(1033627..1034301) /locus_tag="B565_0938" /codon_start=1 /transl_table=11 /product="Thermostable hemolysin" /protein_id="YP_004391590.1" /db_xref="GI:330828638" /db_xref="GeneID:10486855" /translation="MTIEIQAPYRLLLAKSPQQVMALQTYIQAAYTLEFNARIPHFLP CLLGLYRADGTLVGACGLNHANEGALYLEQYLEQPIEAAINTRLGVYPARNRIIEVGN LACSEPGNARLMFAALCRLLCENALDYVVFTGTAKLRNSFARLQLNPVELAPAQAHQV GADADAWGEYYRCQPKVMVGDINQGREVLAQSSLLLNLLAPMPTLFDDAGESSDNQTH QKRCAQ" misc_feature complement(1033747..1034241) /locus_tag="B565_0938" /note="Thermostable hemolysin; Region: T_hemolysin; pfam12261" /db_xref="CDD:152696" gene 1034446..1035093 /locus_tag="B565_0939" /db_xref="GeneID:10486856" CDS 1034446..1035093 /locus_tag="B565_0939" /codon_start=1 /transl_table=11 /product="methyltransferase domain-containing protein" /protein_id="YP_004391591.1" /db_xref="GI:330828639" /db_xref="GeneID:10486856" /translation="MSSTVSCPLCASHRSYPLPVAGKRYHRCLACELVWLDEADHLDE AAEKAVYDGHDNQVDDPRYRTFLMRAFGEVLSRVPTPASGLDFGCGPGPALVAMGREA GYDMVGYDKFYADFPELLTRQYDFITSTEVIEHIAEPRTVLAQLWDCLKPGGLLVLQT QRVLSDERFKSWRYRHDPTHIIFFAEASFQVLAARWQAELSFPHADVAVLQKGTP" misc_feature 1034698..1034919 /locus_tag="B565_0939" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene complement(1035133..1036485) /locus_tag="B565_0940" /db_xref="GeneID:10486857" CDS complement(1035133..1036485) /locus_tag="B565_0940" /codon_start=1 /transl_table=11 /product="glycine/D-amino acid oxidase" /protein_id="YP_004391592.1" /db_xref="GI:330828640" /db_xref="GeneID:10486857" /translation="MCISCFFLAACGPKMSDFEPNTSYWFKEKPAEESAPLAQDLKVD IAIIGGGYSGLSSAWHLAKANPSLKIAIFEAKQVGSGASGRNGGMVLPGSEVMDLYEE GDASKRHYDLTVASMRKLQALVASTGVEANLKLDGYVEAILDEEDIAEYRDYVKTANR LGIPLLYWNADTTEEKLGTDRYVGAVYDPNGGQVHAMKLVNALCKAVEQAGVTIYEQS PVMGIKEGKQIELNVADKYKVTADSIVLATNGYTSKLGYFSSRVFPVHAQSAVTEPLT KKQLAAIQWQSRVPYYDPRNILFHLVLTPDNRIVIGGGNAEYVFNDGLNYKGDLNRVS EMMMTELVTLYPALKGIKFEQVWDGVLGMTGDSTEAVGVMGDHKNIYYALGYNGHGIN LSFLFGDIVASLYQGKEHPWFNHAEQTLPMWLPPEPFKSIGVKSALMYYQWQDKGYKE " misc_feature complement(1035187..1036419) /locus_tag="B565_0940" /note="Malate:quinone oxidoreductase (Mqo); Region: Mqo; cl14881" /db_xref="CDD:196842" misc_feature complement(1035250..1036368) /locus_tag="B565_0940" /note="Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:31009" gene complement(1036550..1037473) /locus_tag="B565_0941" /db_xref="GeneID:10486858" CDS complement(1036550..1037473) /locus_tag="B565_0941" /codon_start=1 /transl_table=11 /product="putative transmembrane protein" /protein_id="YP_004391593.1" /db_xref="GI:330828641" /db_xref="GeneID:10486858" /translation="MTTPTTSAASCDEQATPLPHSVGRSLGAIARANPLKLAGTFSLV ALENILLVVYPLFAGFAIDAIVKGQWLQASSYALIVLLFWLIGALRRAVDTRTFTHIY AALAVPVILTQRQQQEGQSTIVARVTLAREFVDFFEKHIPILATSLISIVGAAVMLMV IEFWVGIACMGILLLFGLLLPGFSRKNQLLHERLNDRLEHEVKLVTHAQSASLSRHYR ALAWLRIRISDREALAFLAVGISASLLFLLAITMLMAQPQVSAGHVYAVMTYLWNFVT SLDEGPGLADQLARLRDIGRRVNTAQPDEMI" misc_feature complement(<1036580..1037368) /locus_tag="B565_0941" /note="ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:31327" gene 1037560..1038174 /locus_tag="B565_0942" /db_xref="GeneID:10486859" CDS 1037560..1038174 /locus_tag="B565_0942" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_004391594.1" /db_xref="GI:330828642" /db_xref="GeneID:10486859" /translation="MDIAGGQMARPSAEQRKEMIIEAVLALFREKGMAASSTRDIAER TGLARSHVYHYFKDWKELCLCAVERFTYQEIAEQREWLLPLPAREALPLFVRDNLPTS QDASWAIYLDAWNESLRDPVFAESYRKIILAWREVLEQILQKGIDSGEFVADDARRLA RQITALINGYADDLILEPTPETVEATYQEIMLVVNQLVLPPVHS" misc_feature 1037578..1038102 /locus_tag="B565_0942" /note="Transcriptional regulator [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:31500" misc_feature 1037617..1037751 /locus_tag="B565_0942" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene 1038282..1039508 /locus_tag="B565_0943" /db_xref="GeneID:10486860" CDS 1038282..1039508 /locus_tag="B565_0943" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391595.1" /db_xref="GI:330828643" /db_xref="GeneID:10486860" /translation="MSITHLSLQDARHLQLAAQGLLAPRRSKATPADLLATIRRMALL QIDTISVVARSPYLVLFSRLGQYEPRWLEQLLADGEIFEYWAHEACFVPREDYRLLRH RMLDPVAMGWKFSANWLATHQQEIDLLIERIRQHGPVRAADFERTTGKGNGWWDWKPE KRHLEVLFTTGQLMVRERRNFQRVYDLAERVIPEWRDERDLPSVEQAQRDMVCASCRA LGLIKTGWVADYYRLRRGKYDALLHQLADEGELLPVRVEGWQHGAFVHASLADELVQA EEGRLKATHTTALSPFDPLVWDRKRASELFNFDYRIECYTPAPKRQYGYFVLPLLHRG KLVGRMDAKAHRQQGIFEIKSLYLEAGVRVTRTLAQDLAKALQKLADWHQTPQLRYGA IPANLLALWHESAPAK" misc_feature 1038282..1039382 /locus_tag="B565_0943" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3214" /db_xref="CDD:33027" misc_feature 1038291..1039382 /locus_tag="B565_0943" /note="Protein of unknown function (DUF1006); Region: DUF1006; pfam06224" /db_xref="CDD:191475" gene 1039642..1040349 /locus_tag="B565_0944" /db_xref="GeneID:10486861" CDS 1039642..1040349 /locus_tag="B565_0944" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391596.1" /db_xref="GI:330828644" /db_xref="GeneID:10486861" /translation="MKICLGEGNEWAPFTYWERKDGVPDTSRLTGSATTLVLDALQQS GLSHQIRYLPWARVQQELADYRQNGLCELTWDASYKPERAEFAFYSVPLYYTHLGFFY LKRRYPEPPDLQTVNRSRVCGVIGYNYTPYGLAQEPRRVKQLQQALDMLERDRCDFLP SEIEPMVAGISLGIYRSESGLLNLALPSRKGFYLLVSKGSPRGHQLVNILNQSLVAFQ EGGHTDEVMRRFLPPME" misc_feature 1039672..1040340 /locus_tag="B565_0944" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature <1039873..1040334 /locus_tag="B565_0944" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature order(1039888..1039890,1040023..1040025,1040125..1040127) /locus_tag="B565_0944" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(1040074..1040076,1040086..1040088,1040104..1040106) /locus_tag="B565_0944" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 1040212..1040220 /locus_tag="B565_0944" /note="hinge residues; other site" /db_xref="CDD:29040" gene complement(1040439..1041563) /locus_tag="B565_0945" /db_xref="GeneID:10486862" CDS complement(1040439..1041563) /locus_tag="B565_0945" /codon_start=1 /transl_table=11 /product="carboxypeptidase G2" /protein_id="YP_004391597.1" /db_xref="GI:330828645" /db_xref="GeneID:10486862" /translation="MTFSLDQYLAELAPLINLDCGSLHQPGIAAVADLMAAKYEAMGG WQIKRVDCGAAGVGLEIRNQPDAAQIDVMLIGHMDTVFPLGTAAARPMSIDGERAYGP GVSDMKSGLLNIVYALRELPREVRDRLSICVCMNPDEEIGSLHSSDWLATVAKQAKQV LVAEAARADGSLVKARKGMARYRIDFTGKAAHAGNEPQKGRSAITELGHWILAINALT NFESGTTLNIGIVEGGNGANIVPAHASAVVDVRFWDNQEYHQINDHLLTLAERPHLDG VTIQLTREAHKPAMVPSEGTQALIQLVEECGAELGLPISWQEVGGGSDANLTAALGIP TLDGLGPIGAGFHSDEEYLDLASIAPRIELLVKVLTRLAA" misc_feature complement(1040457..1041542) /locus_tag="B565_0945" /note="M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme; Region: M20_CPDG2; cd03885" /db_xref="CDD:193506" misc_feature complement(1040442..1041515) /locus_tag="B565_0945" /note="hypothetical protein; Provisional; Region: PRK07338" /db_xref="CDD:180938" misc_feature complement(order(1040523..1040525,1041072..1041074, 1041144..1041149,1041246..1041248,1041333..1041335)) /locus_tag="B565_0945" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193506" misc_feature complement(order(1040811..1040813,1040817..1040819, 1040841..1040843,1040847..1040855,1040862..1040885, 1040928..1040933,1040937..1040942,1040952..1040954, 1040958..1040960,1040979..1040987)) /locus_tag="B565_0945" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:193506" gene complement(1041589..1042056) /locus_tag="B565_0946" /db_xref="GeneID:10486863" CDS complement(1041589..1042056) /locus_tag="B565_0946" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="YP_004391598.1" /db_xref="GI:330828646" /db_xref="GeneID:10486863" /translation="MSQANIKKPIVTDIFVEGAKKGWVIATTSTVPNVLMAFVIIKAL QITGALDAMGAIFSPVMAIFGLPGEAAAVLIGAWMSMGGAVGVVITLFDQGILNGTHI AILAPAIYLMGSQVQYMGRILGCIGTEGRYIPIMVAISVLNAFGAMLVMNILL" misc_feature complement(1041592..1042038) /locus_tag="B565_0946" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" gene complement(1042053..1042781) /locus_tag="B565_0947" /db_xref="GeneID:10486864" CDS complement(1042053..1042781) /locus_tag="B565_0947" /codon_start=1 /transl_table=11 /product="transporter gate domain-containing protein" /protein_id="YP_004391599.1" /db_xref="GI:330828647" /db_xref="GeneID:10486864" /translation="MTDKTRSVSIGSYLALAFAVVFFSGLLQSGEWYGVFDFTTLNGS FGTMVQSVSENGDGIKTAMTDMRGKGGNGARDGFLFALTLIPTVMFALGMINVLEHYG ALEAARKLLTPLLRPLMGIPGNTGLALIASLQSTDAGAAMTRQLKDEGLITKRETDVF TMFQFSAGATIVNFFSSGAVLFTLTLADGSPAVSSSIGLAVIVMFAFKFVGANLFRVY LNMSEGKQTDNNTQQTLNTQEQAK" misc_feature complement(<1042107..>1042781) /locus_tag="B565_0947" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3314" /db_xref="CDD:33123" misc_feature complement(1042245..1042541) /locus_tag="B565_0947" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" gene complement(1043050..1043406) /locus_tag="B565_0948" /db_xref="GeneID:10486865" CDS complement(1043050..1043406) /locus_tag="B565_0948" /codon_start=1 /transl_table=11 /product="fumarate reductase, 13 kDa hydrophobic protein" /protein_id="YP_004391600.1" /db_xref="GI:330828648" /db_xref="GeneID:10486865" /translation="MRRSDEPIYWGLFGAGGMVVAMLLPVIVLITGLLVPMGIMDVET MSYDRVHAFASSWWGACILLVIIALPVWHGMHRIYHGLHDLGIHTTKLHHYVFYGFAF LVSAISVGLLMVLVLQ" misc_feature complement(1043062..1043403) /locus_tag="B565_0948" /note="Quinol:fumarate reductase (QFR) Type D subfamily, 13kD hydrophobic subunit D; QFR couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, the opposite reaction to that catalyzed by the related protein, succinate:quinine...; Region: QFR_TypeD_subunitD; cd00547" /db_xref="CDD:48052" misc_feature complement(order(1043155..1043157,1043377..1043379, 1043386..1043388,1043395..1043400)) /locus_tag="B565_0948" /note="Iron-sulfur protein interface; other site" /db_xref="CDD:48052" misc_feature complement(order(1043365..1043370,1043377..1043379)) /locus_tag="B565_0948" /note="proximal quinone binding site [chemical binding]; other site" /db_xref="CDD:48052" misc_feature complement(order(1043062..1043064,1043083..1043085, 1043149..1043157,1043173..1043178,1043206..1043208, 1043245..1043247,1043254..1043256,1043260..1043262, 1043266..1043268,1043299..1043301,1043344..1043346, 1043356..1043358)) /locus_tag="B565_0948" /note="C-subunit interface; other site" /db_xref="CDD:48052" misc_feature complement(order(1043248..1043250,1043257..1043262, 1043314..1043316,1043326..1043328)) /locus_tag="B565_0948" /note="distal quinone binding site; other site" /db_xref="CDD:48052" gene complement(1043417..1043815) /locus_tag="B565_0949" /db_xref="GeneID:10486866" CDS complement(1043417..1043815) /locus_tag="B565_0949" /codon_start=1 /transl_table=11 /product="fumarate reductase, 15 kDa hydrophobic protein" /protein_id="YP_004391601.1" /db_xref="GI:330828649" /db_xref="GeneID:10486866" /translation="MNNTDSKRKPYVREMKKDWWLKNAFYTGYMIREGTSIFVSIYAV VLMWGLMRLVQGQEAFNGWLESLQSPIAILFHVVALAACLFHAKTWFALAPKAMRIFR GEDLVPEKPIVLAQYVALAVVSLLVLIIVA" misc_feature complement(1043483..1043794) /locus_tag="B565_0949" /note="Quinol:fumarate reductase (QFR) Type D subfamily, 15kD hydrophobic subunit C; QFR couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, the opposite reaction to that catalyzed by the related protein, succinate:quinine...; Region: QFR_TypeD_subunitC; cd00546" /db_xref="CDD:48051" misc_feature complement(order(1043519..1043521,1043525..1043530, 1043537..1043539,1043546..1043548,1043555..1043560, 1043576..1043578,1043588..1043590,1043612..1043614, 1043636..1043638,1043654..1043659,1043663..1043665, 1043675..1043677,1043687..1043692,1043705..1043707, 1043711..1043713,1043717..1043722,1043729..1043731, 1043738..1043743,1043747..1043749,1043759..1043761, 1043765..1043767,1043771..1043773,1043777..1043779, 1043783..1043794)) /locus_tag="B565_0949" /note="D-subunit interface [polypeptide binding]; other site" /db_xref="CDD:48051" misc_feature complement(order(1043519..1043521,1043528..1043530, 1043537..1043539,1043720..1043722,1043729..1043731, 1043738..1043743,1043747..1043749,1043771..1043773, 1043777..1043779,1043783..1043785,1043789..1043794)) /locus_tag="B565_0949" /note="Iron-sulfur protein interface; other site" /db_xref="CDD:48051" misc_feature complement(order(1043537..1043539,1043546..1043548, 1043717..1043722)) /locus_tag="B565_0949" /note="proximal quinone binding site [chemical binding]; other site" /db_xref="CDD:48051" gene complement(1043832..1044557) /locus_tag="B565_0950" /db_xref="GeneID:10486867" CDS complement(1043832..1044557) /locus_tag="B565_0950" /codon_start=1 /transl_table=11 /product="fumarate reductase iron-sulfur protein" /protein_id="YP_004391602.1" /db_xref="GI:330828650" /db_xref="GeneID:10486867" /translation="MIEIEILRYRPEQDNEPWMQTFQVPYQREMSLLDALQYIKDHLD STLSFRWSCRMAICGSCGMMVNGVPKLGCKAFLRDYLPGKMTVEPLNNFPIERDLVVD MSDFIEKLESIKPYIIPSEPRSLCDGEYIQTPAQMAQYKQFSQCINCGLCYAACPQYG INKKFTGPAALALAYRYNVDNRDAGAKERMRIISQDEGVWGCTFVGYCSEVCPKGVDP AAAIQLGKVESAKDYMIAMFKPD" misc_feature complement(1043835..1044557) /locus_tag="B565_0950" /note="fumarate reductase iron-sulfur subunit; Provisional; Region: PRK12385" /db_xref="CDD:183490" gene complement(1044559..1046343) /locus_tag="B565_0951" /db_xref="GeneID:10486868" CDS complement(1044559..1046343) /locus_tag="B565_0951" /codon_start=1 /transl_table=11 /product="fumarate reductase, flavoprotein subunit" /protein_id="YP_004391603.1" /db_xref="GI:330828651" /db_xref="GeneID:10486868" /translation="MDIIKTDVAIIGAGGTGLRAAIAIAESQPDLDIALISKVYPMRS HTVAAEGGAAGVVRDDDSLENHFNDTVSGGDWLCEQDVVEYFVNNATKEMIQLEHWGC PWSRKPDGKANVRPFGGMKVPRTWFAADKSGFHILHTLFQTSVKYPSIKRFDEHFCLD LIVDDGRVQGVLTFDIQNGITRFIQAKSVIVATGGAGRVYRYNTNGGIVTGDGMALAY RHGVPLRDMEFVQYHPTGLPGTGILMTEGCRGEGGVLLNKDGYRYLQDYGLGPETPIG QPKSKYMELGPRDRVSQAFWQEQQKGRVIQGPMGDVVHLDLRHLGEKYLKERLPFICE LAKAYVNVDPAKEPIPVRPTAHYTMGGIETDNKCATRLPGLYAAGECASVGLHGANRL GSNSLSEIVVFGKLAGEQAGEFAKTQKHGNTEALAAKAEALIKQHLSLMDVDGTENPA DIRNELGMSMEAGVGIYRTEELMQGTIDKINELKARYKKVKINDKSSVFNTDLLYAIE LGYMLDVAEAMAHSAINRKESRGSHQRLDGYEERDDVNFLKHTLSFYKNGETPSIDYS DVKITKSQPAKRVYGSEGEKQDEAKKNG" misc_feature complement(1044598..1046340) /locus_tag="B565_0951" /note="fumarate reductase flavoprotein subunit; Validated; Region: PRK09231" /db_xref="CDD:181714" misc_feature complement(1045117..1046328) /locus_tag="B565_0951" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(1044604..1044987) /locus_tag="B565_0951" /note="domain; Region: Succ_DH_flav_C; pfam02910" /db_xref="CDD:190472" gene complement(1046853..1048730) /locus_tag="B565_0952" /db_xref="GeneID:10486869" CDS complement(1046853..1048730) /locus_tag="B565_0952" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004391604.1" /db_xref="GI:330828652" /db_xref="GeneID:10486869" /translation="MNLSIKNKLVLAIGVIILVITCLQVWYNTSQLRSETQRLVWNII DESSMANVKGISRWVDSRISMVSTTKEAFAKEDEPISHLAQSMNAGGFDLVYAGTADG KMIQSKPTDLPAGYDPRQRPWYKDAAAAGKLVITAPYADISTGQLIVTIAEPFQRGNT QGVIAGDVSISSLISDILAVTTEGTYAMLVDSNGTIIAHPDASLSLKSATALAPELTA AYINQVAHDGMINELVISGKKEVYDFNAIPNTNWYYGMMVDEEIAYQSVRRMVTSSLI QGLITILIVAGFSYVAINSSLAPLKTLGEAIADLSRGNGDLTRRIKIEREDEVGAVAK HVNTFIERIHVMVQDISNSSGQLNQQAKSSHSMAEKANQGLARQQNEISQIATAVHEM SATAVEVASNAEQTAEAARSSSSSCEHGKQVIARNQRSITDLATQVEQASNIIQELEK NAQEINTILSTIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHSST VEIRNMIETLQRNTQGAVSTMHEGQLLAQNSVDDANNATHALEQITTSINQISDMATQ ISSAAEEQRAVTDEVSRNIQAVKDVSDELAVDADSSRHLSEQLKNISGELSNQVGMFR I" misc_feature complement(1048128..1048328) /locus_tag="B565_0952" /note="Cache domain; Region: Cache_1; pfam02743" /db_xref="CDD:145738" misc_feature complement(1047699..1047911) /locus_tag="B565_0952" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(1046859..1047656) /locus_tag="B565_0952" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(1046856..1047449) /locus_tag="B565_0952" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1048886..1049569) /locus_tag="B565_0953" /db_xref="GeneID:10486870" CDS complement(1048886..1049569) /locus_tag="B565_0953" /codon_start=1 /transl_table=11 /product="glycerophosphoryl diester phosphodiesterase family protein" /protein_id="YP_004391605.1" /db_xref="GI:330828653" /db_xref="GeneID:10486870" /translation="MQIIAHRGASGLAPENTLKAMAKALELGASAIEIDVQAADGELW VFHDRRLERCTNGKGVLTEQSRSYLEQLDAGEGEVIPTLWQVMEIIAGRCELHIELKG THTADAVTALTRRAEAELGFTPGQWVVSSFHHPELARFAASRPDIRLGALTANLPLNL AQFADELGAWSLNCDVDFVDQSLVVDAHRRGLKVLVYTVDYPEDYETLSSMGVDGIFT NRPDRFLTQ" misc_feature complement(1048910..1049563) /locus_tag="B565_0953" /note="Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins; Region: GDPD; cd08556" /db_xref="CDD:176499" misc_feature complement(1048904..1049554) /locus_tag="B565_0953" /note="Glycerophosphoryl diester phosphodiesterase family; Region: GDPD; pfam03009" /db_xref="CDD:145909" misc_feature complement(order(1048979..1048981,1049114..1049116, 1049174..1049176,1049273..1049275,1049429..1049431, 1049465..1049467,1049471..1049473,1049552..1049554)) /locus_tag="B565_0953" /note="active site" /db_xref="CDD:176499" misc_feature complement(order(1049429..1049431,1049552..1049554)) /locus_tag="B565_0953" /note="catalytic site [active]" /db_xref="CDD:176499" misc_feature complement(order(1049273..1049275,1049465..1049467, 1049471..1049473)) /locus_tag="B565_0953" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:176499" gene complement(1049594..1052875) /locus_tag="B565_0954" /db_xref="GeneID:10486871" CDS complement(1049594..1052875) /locus_tag="B565_0954" /codon_start=1 /transl_table=11 /product="Small Conductance Mechanosensitive Ion Channel (MscS) Family protein" /protein_id="YP_004391606.1" /db_xref="GI:330828654" /db_xref="GeneID:10486871" /translation="MLQRLLTLLLLSLILLPPAVRADDAIAQAESLLQSVPKSDTPEN QKLRESYQQALQFAREAERYREQSKAYQQILIDYPKESARLKESLHNYQPAARPPLAS LKEEALRQAIGLSSNRQLNLRKERQGVMDSLNQLESTGQEYHLRVDDLRKQLQLTRSQ LERLSFSSESDRQQEAQLLLTRMKEQSLSDRIQMLELEQLSAQQRNDLGKLKLQELNL AIADEDEWQASLLTQQNQLRREKTEQALEESERLRKQLTTDMPLLLEQQQQNQALSIQ LGTLEDQIERVQDEQRSVDKNLFELNELVNSVREQLEWLQISNAYGENLRSKLSDLPP QFPLDKLESAIVSARMAKYQYESEQDGLKDTRQLRDKLMAEEEVTLDRPQQAVLDNLL KARRQLLTRLNDASDTLIQEQTRLKLLYSRQNSKIDEIREISASHLFWMPDVRPFTPQ VMLGIPAALTLAFNPDNWLQLPYAIAENSPLSLTLAGIGLLVLAWSWFKLARHLSLYC DHIAPRIGKVTQDKFSLTSRLLLRSLLAALPLPAMVLMVRGLLEGAWQYPFAVAVARG LGEIWFLLLALVMARHLTLERGILIHHFRWPREQVQKVWGQFRTLLLVLIPSFFVQGM ANSYQEHAFYDSLGRMAFMIGALWLLLFFARLNRERLPLTWGQTDMTKPHLLHHFIWN SLMLAPLLAVIGALFGYFYTSRTLLRQLELSLLMGLGCLLVYYLARRWMLIQRRRLAF ERAKSKRAEILAQRGREEGHDELSSETPDVVEETELDLDTISAQSLGLVRTLLMLGFT MLVVVQWSDLNSAFSFLSNIEVWQVSSKIGGIEQLSAITLQDLMLTAFVFILTVVTAR NLPGLMELTLLQHLSLSPGTGFALTTTSKYLVILIGALTGFSMLGIDWSKTQWLVAAL SVGLGFGLQEIFANFVSGLIILFEKPIRLGDTVTIRDLTGTVTKIKTRATTIVDWDRK EIIVPNKAFITEQFINWSLSDAITRVKLRIRIGLTRNPKLVQRILEESIQASTLVLET PTPEVFLIEFTDSALIYEIRLYVNNMDHRMPITHEVHSLVLEKMQQQGLTLPHQQIDI HLSRG" misc_feature complement(1049630..1052797) /locus_tag="B565_0954" /note="putative mechanosensitive channel protein; Provisional; Region: PRK10929" /db_xref="CDD:182846" misc_feature complement(1050413..1051426) /locus_tag="B565_0954" /note="Mechanosensitive ion channel inner membrane domain 1; Region: MscS_TM; pfam12794" /db_xref="CDD:193270" misc_feature complement(1049630..1050223) /locus_tag="B565_0954" /note="Mechanosensitive ion channel; Region: MS_channel; pfam00924" /db_xref="CDD:144501" gene 1052980..1054368 /locus_tag="B565_0955" /db_xref="GeneID:10486872" CDS 1052980..1054368 /locus_tag="B565_0955" /codon_start=1 /transl_table=11 /product="Mate efflux family protein" /protein_id="YP_004391607.1" /db_xref="GI:330828655" /db_xref="GeneID:10486872" /translation="MLPFRYDPGRFLSTESNMSAVDLGTAPLSRLFWRYVTPTVAAML ITGIYVTIDGIFVGHVLGQDGMAGLMLAYPICAVLYAVGALIGMGASSLVSFYLGQGN PAKARHIVGNALVMVLLASALLSFIGIRYGEPMLAWMGAEGEIFTAGLSYLQAYAWLG VFAVLSMAFSSLLRNDGRPGFVTLIMVVGGLLNVLLDYLLMVVFPFGLAGVATATMLS QAVTGLACLWHFFTPRSQLRISWDTLRPDLRLMGETVRLGISSFLMYLYLSVVLALHN KALLAVGTSLHVAAYGVISYTEAFFYLMFEGIAMGIQPIASFNAGAGHWRRVLRIRNL ALGVTLGIALCAMFPLYLWPEAAVYLFAGDNATLLPVASLGIWLYFWGLPMEGLLLVG ATYFQAINRARIASLLTGGKLVLIGGFLWGFSTLWGVPGVWLALPTCSSLLVLVMWRA MRRESGAHALAG" misc_feature 1053061..1054338 /locus_tag="B565_0955" /note="multidrug efflux pump VmrA; Reviewed; Region: vmrA; PRK09575" /db_xref="CDD:181964" misc_feature 1053091..1053516 /locus_tag="B565_0955" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" misc_feature 1053832..1054224 /locus_tag="B565_0955" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" gene complement(1054457..1055278) /locus_tag="B565_0956" /db_xref="GeneID:10486873" CDS complement(1054457..1055278) /locus_tag="B565_0956" /codon_start=1 /transl_table=11 /product="peptidase, M23/M37 family" /protein_id="YP_004391608.1" /db_xref="GI:330828656" /db_xref="GeneID:10486873" /translation="MRVVCCLLLLLASQSALAEGFISRLLNHPVPGGVAVIPLGASAT APTARYHDKPVLVVREDNQWIAIVGISLKSTPGAQQLTTGDGRTLDFTVTPKHYREQH IKLKNSRQVNPLAEDMTRINRELAEQTRAYQTFSPNQPSNLMFDKPVNGPLSSPFGLR RFFNGEERNPHSGLDFAVGAGTPIKSPAAGKVILIGNYFFNGNTVFVDHGQGLISMFC HMSKIDVKLGQSLPRGGIVGRVGSTGRATGPHMHWNVSLNDTRVDPAIFIGAFKP" misc_feature complement(1054487..1054771) /locus_tag="B565_0956" /note="Peptidase family M23; Region: Peptidase_M23; pfam01551" /db_xref="CDD:190031" gene 1055581..1056360 /locus_tag="B565_0957" /db_xref="GeneID:10486874" CDS 1055581..1056360 /locus_tag="B565_0957" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391609.1" /db_xref="GI:330828657" /db_xref="GeneID:10486874" /translation="MNGLPPLRTTPARYTTGRGWLWVRSGFDIFNKGMGVSVAMVLVW FMVGMLLEQLPAGGLISQLLYMVWGAGWVAVAARGYRGEPLQFADLFAGFRHKLTPLM LGGLLVLLLFSLVGLVCLGLLSMWGLLPLLTQDPESMVVSASQLQQLLLVLLVGMLLI IPVLMGVTFAPALIYHHDIGIIQAVRLSFFGCWRNIFPFFWWGLLSAMLLMFGAVLLL VGLLVVIPALNYSIYVAYRDIFLDESAQPEAPHSEPFGFEA" gene complement(1056427..1057326) /locus_tag="B565_0958" /db_xref="GeneID:10486875" CDS complement(1056427..1057326) /locus_tag="B565_0958" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulatory protein" /protein_id="YP_004391610.1" /db_xref="GI:330828658" /db_xref="GeneID:10486875" /translation="MDRLTALRVFVSVVEQGSLSGAGEKLDMSRAMVSRYLAELESWM GARLLHRTTRRLSLTGPGEEALNRARAMLALGEEMEQIAVKGDDAPKGQLRITSSYSL SEALLVGAANDYLAQYPGTAIDILLLDRTVNLVEERIDLAVRITNDLDPNLVARRLGT CHSVVCASPAYLARHPMPHKVQDLALHNCLTYTYFGKSLWEFNGPDGPESVPVSGNLS ANISSLLLEATLEGAGISLQPRYSAQPYLEHGELVPLLTDWQPKRLGVYGVYATRKQM SPLLRSFLDFLLARMAADPIWQE" misc_feature complement(<1057189..1057317) /locus_tag="B565_0958" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(1056460..1057308) /locus_tag="B565_0958" /note="transcriptional activator TtdR; Provisional; Region: PRK09801" /db_xref="CDD:182085" misc_feature complement(1056466..1057053) /locus_tag="B565_0958" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature complement(order(1056529..1056531,1056610..1056612, 1056661..1056663,1056844..1056846,1056850..1056852, 1056892..1056894,1057009..1057011,1057021..1057023)) /locus_tag="B565_0958" /note="putative effector binding pocket; other site" /db_xref="CDD:176114" misc_feature complement(order(1056634..1056636,1056643..1056648, 1056667..1056681,1056763..1056765,1056946..1056966, 1056970..1056972,1056982..1056984,1056991..1056996, 1057000..1057005,1057015..1057020)) /locus_tag="B565_0958" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 1057453..1058313 /locus_tag="B565_0959" /db_xref="GeneID:10486876" CDS 1057453..1058313 /locus_tag="B565_0959" /codon_start=1 /transl_table=11 /product="Zn-dependent hydrolase" /protein_id="YP_004391611.1" /db_xref="GI:330828659" /db_xref="GeneID:10486876" /translation="MNNTLIRNLTLATTLLSGAVLAAPLSVTVYNPGEKAIFPVSSSL VTGDKEAILIDAQFDVQNGQALVDMIKKSGKKLTTVYISAGDPDFYFGLEPVMAAFPD VKVLADQHVVDHINQTKDAKLSYWSPILGKGAPKSLTVPQVMTASHLTLDGEKIEIKE MNTPNAYLWAPSIKTAFGGVPVYHGVHVWMADSQTKAARSNWVKALDNLLALKPERVV PGHFLGTAPKGTAAVSFTRDYVERFEQELAKAKNSGELIEALKKAYPALPVDDGLAIG AKVNTGEMKW" misc_feature 1057564..1058115 /locus_tag="B565_0959" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" gene 1058389..1059033 /locus_tag="B565_0960" /db_xref="GeneID:10486877" CDS 1058389..1059033 /locus_tag="B565_0960" /codon_start=1 /transl_table=11 /product="putative protein-disulfide isomerase" /protein_id="YP_004391612.1" /db_xref="GI:330828660" /db_xref="GeneID:10486877" /translation="MKMSEQQTTLHYVYDPLCGWCYGAAPLLQAAATIAGLKIELHAG GLWLGSRRQPMGEALRDYVRPHDQRIEALTGQHFGERYFNELLLREGCLLDSEPPIRA VLAVTALGGNGLAMLHRIQQSHYRDGIWIGEPAFLATLAAEQGISAEEFQQAYLQAPL LQHLADSQGWMKWLGGQGYPTLGLMHNGKVSAVRVADFLGDPAGLRQHLLELME" misc_feature 1058410..1059027 /locus_tag="B565_0960" /note="Predicted protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]; Region: COG3531" /db_xref="CDD:33334" misc_feature 1058413..1058967 /locus_tag="B565_0960" /note="DsbA family, FrnE-like subfamily; composed of uncharacterized proteins containing a CXXC motif with similarity to DsbA and FrnE. FrnE is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the...; Region: DsbA_FrnE_like; cd03025" /db_xref="CDD:48574" misc_feature order(1058440..1058442,1058449..1058451) /locus_tag="B565_0960" /note="catalytic residues [active]" /db_xref="CDD:48574" gene 1059206..1060846 /locus_tag="B565_0961" /db_xref="GeneID:10486878" CDS 1059206..1060846 /locus_tag="B565_0961" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004391613.1" /db_xref="GI:330828661" /db_xref="GeneID:10486878" /translation="MFKNMSIGQKLSAGFAILALLVLGLAWFSISQLAKLYGDTETIT DNLLPSTRYASQMHVAILDARRSELAQVIGGLNKDDQEVSDRTLTFNKARQEFEQAAQ KYGALAFTTGEEKQVYEQVVAAGAKYFAVHDQLLSAFAAGDLERVRSLRKNETRVALE EVGAKSFRLREINNEIAAQMTKDVEALYSSARTMSVIVSLVTLGFVVAIAWLLTGQIR NPVMALLEQTRRVSSGDLTSRIDMQQFNNDELGTLAKGFGEMQTNLRTLVSEVSGSVV QLSSAAEEISSVASQSANNMNAQQHELNQLATAMNEMQATVQEVSRNTSDAASAATSA SETAELGAQTVNDSILRIERVAGAIESTAVVIRQLGDDSRNIGMVLEVIRGIAEQTNL LALNAAIEAARAGEQGRGFAVVADEVRTLAKRTQDSTSQINTIIAELQQRAEQAGSTM QQSQELMNTTVATAREAGESISQISGSVSSISHMNIQIATATEEQGAVSEELNRNVVN ISHASEEVAAGATQMAQACNELNHLATQLQDMVRRFRV" misc_feature 1059206..1059844 /locus_tag="B565_0961" /note="CHASE3 domain; Region: CHASE3; cl05000" /db_xref="CDD:195024" misc_feature 1059215..1059769 /locus_tag="B565_0961" /note="Four helix bundle sensory module for signal transduction; Region: 4HB_MCP_2; pfam12729" /db_xref="CDD:193205" misc_feature 1059788..1060003 /locus_tag="B565_0961" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 1060085..1060840 /locus_tag="B565_0961" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 1060223..1060843 /locus_tag="B565_0961" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 1061003..1061902 /locus_tag="B565_0962" /db_xref="GeneID:10486879" CDS 1061003..1061902 /locus_tag="B565_0962" /codon_start=1 /transl_table=11 /product="hydrogen peroxide-inducible genes activator" /protein_id="YP_004391614.1" /db_xref="GI:330828662" /db_xref="GeneID:10486879" /translation="MNLRDLEYLVALDEEKHFRKAAERCFVSQPTLSGQLRKLEDELG VILIERTSRKVLFTPAGDAMAHQARRVLKEVRELKSIGQHFSEPMSGEIHIGFIPTVG PYLLPRIIQTLRERFPQLEFYLYEEQTQTLLKRLEEGELDCVILAEMPGMEGFGSIQL YHEPMWLAVPCHHPEAQARQVPLGNLKGKKLLMLADGHCLRDQAMGFCFAGGIGEDQR FKGTSLETLRNMVAAGSGMTLVPKLAVPADHDEGGVSYRPVVDPVPGRTISLLYRHYS VRRPCFNELAASIATLMSKQLAQ" misc_feature 1061003..1061899 /locus_tag="B565_0962" /note="DNA-binding transcriptional regulator OxyR; Provisional; Region: PRK11151" /db_xref="CDD:182999" misc_feature 1061009..1061185 /locus_tag="B565_0962" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 1061273..1061869 /locus_tag="B565_0962" /note="The C-terminal substrate-binding domain of the LysR-type transcriptional regulator OxyR, a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_OxyR; cd08411" /db_xref="CDD:176103" misc_feature order(1061309..1061311,1061318..1061323,1061330..1061332, 1061342..1061344,1061366..1061380,1061657..1061659, 1061666..1061671,1061678..1061680,1061687..1061692, 1061696..1061701) /locus_tag="B565_0962" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176103" gene complement(1061952..1064423) /locus_tag="B565_0963" /db_xref="GeneID:10486880" CDS complement(1061952..1064423) /locus_tag="B565_0963" /codon_start=1 /transl_table=11 /product="Penicillin-binding protein 1A" /protein_id="YP_004391615.1" /db_xref="GI:330828663" /db_xref="GeneID:10486880" /translation="MLKWLVRLFIVMMLGAVLGVASLIGIYFYIKPQLPDVTALRDVK LATPMRVYSRDGELIAQYGEIRRIPLRLDEIPQPMIDAVLATEDARFYEHPGIDPIGI IRAASVWAVSGHARQGASTITQQVARNFFLSNEKTIIRKIKEVFLAWRIEQNLSKDEI LELYLNKIPLGYRSFGIGAAAQVYFGKEVKDLGLDEIAIIAGLPKAPSMLNPIRSPER AFARRNVVLGRMLETGKITQAQFDEASKMPIKARFHGAEVTLHAPYLGEMVRQKMVEQ FGEDAYTMGLHVYTTVSAERQRAARQALLDGVFAYDMRHGYRGPTDQLWKAGETAWDY EQIVAHLGKQPTYDPLMAAVVTKLGDRSATLVLKNGKEAELGWNGIKWARSFITDDRQ SYAPKSARDVLKVGAQIWVREEGEELLLAQIPDVNAALVAMNPKNGALEALVGGFSFE LSKFNRVDQARRQIGSNIKPFLYATALEHGYTLASLINDAPINQWDPSKGPMWQPKNS PAVYDGPTPLRLGLAKSKNVMSVRLMRAIGLDTYIDGLTRFGFPRDFISPHESLALGA AEFTPLEVVRGYSVLANGGFLVTPYFIDKVTDSLENTLYQANPAIACTTCEQQAAPEQ STLPEPTVDGAAQDGTQTPLAPIIAPHTISAQSAFLITDTLSTAIWGGNGWRGTGWRA ARDLKRHDISGKTGTTNESRDAWFSGYTPDIVATSWIGFDNHQRGLGRAEFGGGAAQP IWIDFMKVALKKLPEHKMPVPEGIMTVKIDSETGLLATSGGTDEYFKEGTEPTRYAAP SSDGNQVYGGDNPDVEGPVSTDDIF" misc_feature complement(1062030..1064420) /locus_tag="B565_0963" /note="penicillin-binding protein 1a; Provisional; Region: mrcA; PRK11636" /db_xref="CDD:183248" misc_feature complement(1063731..1064261) /locus_tag="B565_0963" /note="Transglycosylase; Region: Transgly; cl07896" /db_xref="CDD:195645" misc_feature complement(1062183..1063142) /locus_tag="B565_0963" /note="Penicillin binding protein transpeptidase domain; Region: Transpeptidase; cl01039" /db_xref="CDD:154162" gene 1064724..1065785 /locus_tag="B565_0964" /db_xref="GeneID:10486881" CDS 1064724..1065785 /locus_tag="B565_0964" /codon_start=1 /transl_table=11 /product="type IV pilus biogenesis protein PilM" /protein_id="YP_004391616.1" /db_xref="GI:330828664" /db_xref="GeneID:10486881" /translation="MFGLFNKGSLLPLVGIDFGSQTIKAVTLSGRPGKLHLESVADIA TPKGTLVDYQLQDIERVSQSLKTLKRLIPAHSDYAATAVTGSNVITKVIQIDARLSDK ELENQVQLEAEQIIPFPLDEVSLDFEVLSTNNSEDRQDVLLSAARTESVNGRVSALAE AGIAVKVVDVGAHALGRAVVACLPELQESERPIGVIDIGASAMTFAALVKGEVIYSRL QNFGGDQYSQALSSFYGMTLDEAEQAKTKGTLPVDHELDVLMPHINSLLQQVRRNIQL FCSSSGYRDIAKLVLTGGGSLLPGLLVQVKEEVNCEVLHPDLFALFGKPKGEAELVHG AKYMTAFGLALRSFTPCQI" misc_feature 1064766..1065767 /locus_tag="B565_0964" /note="Competence protein A; Region: Competence_A; pfam11104" /db_xref="CDD:192707" misc_feature 1065300..>1065464 /locus_tag="B565_0964" /note="Cell division protein FtsA; Region: FtsA; cl11496" /db_xref="CDD:196250" gene 1065773..1066351 /locus_tag="B565_0965" /db_xref="GeneID:10486882" CDS 1065773..1066351 /locus_tag="B565_0965" /codon_start=1 /transl_table=11 /product="type IV pilus biogenesis PilN" /protein_id="YP_004391617.1" /db_xref="GI:330828665" /db_xref="GeneID:10486882" /translation="MSNINLLPWREARAQRQKKQFGALLGIFVLATVALGFFANWLVD RQIVAQQQRNQRLVQEMTILDAQLGEIRLLKERRKELIDRMQLIEQLQMRRNVPVRLF NQLPSLVPNGVYLNTLSMQNNIIDVNGKTEAYGRVASMMRRIDGSGWLGQAKISTIFA ADVAPVSLSQFSMMFLIANNAAAAGNVAKEQQ" misc_feature 1065773..>1066252 /locus_tag="B565_0965" /note="Tfp pilus assembly protein PilN [Cell motility and secretion / Intracellular trafficking and secretion]; Region: PilN; COG3166" /db_xref="CDD:32979" misc_feature 1066070..1066297 /locus_tag="B565_0965" /note="Fimbrial assembly protein (PilN); Region: PilN; pfam05137" /db_xref="CDD:191205" gene 1066348..1066947 /locus_tag="B565_0966" /db_xref="GeneID:10486883" CDS 1066348..1066947 /locus_tag="B565_0966" /codon_start=1 /transl_table=11 /product="type IV pilus biogenesis protein PilO" /protein_id="YP_004391618.1" /db_xref="GI:330828666" /db_xref="GeneID:10486883" /translation="MNLQQLNELDINDIASWPKWAKGVFIFFCCVLTGGAIYYYVIAN SLTSLTQEAGKETELKAQFESKAMLAANLGAYKAQMVQLEQLVDTQLKQLPNTHEVAG LLDDISFIATDNGLKLNRINWEPEVKHEFSTELPMRIEVVGTYHQIGKFTADMAALPR IVILDSFTLGQSKDEGELISMSMLAKTYKYNGKTVEPKQ" misc_feature 1066492..1066923 /locus_tag="B565_0966" /note="Pilus assembly protein, PilO; Region: PilO; cl01234" /db_xref="CDD:154281" gene 1066944..1067477 /locus_tag="B565_0967" /db_xref="GeneID:10486884" CDS 1066944..1067477 /locus_tag="B565_0967" /codon_start=1 /transl_table=11 /product="type IV pilus biogenesis protein PilP" /protein_id="YP_004391619.1" /db_xref="GI:330828667" /db_xref="GeneID:10486884" /translation="MRRICWLLPALLLAACGGQEDMDSYVAQTKARPPIPIEPLPELK PFAPMHYQQRELRSPFMVPQPEATVGSTSTAKAQPDCAQTLMEREKEVLENYSLASLS MHGSLGKAGQLWALISTPDGKSMRVGLNQYMGLDQGRVIKITDTAVDLLETIPDGKGC WVTRETQLAMANVQEKQ" misc_feature 1067004..1067453 /locus_tag="B565_0967" /note="Pilus assembly protein, PilP; Region: PilP; cl01235" /db_xref="CDD:154282" gene 1067494..1069719 /locus_tag="B565_0968" /db_xref="GeneID:10486885" CDS 1067494..1069719 /locus_tag="B565_0968" /codon_start=1 /transl_table=11 /product="type IV pilus secretin PilQ" /protein_id="YP_004391620.1" /db_xref="GI:330828668" /db_xref="GeneID:10486885" /translation="MRTTIESVSKVALLFCASALSQAWAVATLQEIKVNPLLADQLLV ELSFSEPVTGFTDRLSYQPNQLLLHVPGAVGALKVNPLPIQRLGVDNIKVEGKGAGLD IKIALDQLAPYQVQQQGNKLLVSLGEGASSGLINGESALIAPATSATPVPAPSAMVAT PSPSALLNPQVVARSMPVAPVTTPVATQPASKPVLNNYQSSGGGAYFNSVTGVDFRRG KDGQGEFLVTLDNSSAAVDVSSRGQTVLAKFHGTRVPDGLLNLINVQDFATPVSQVEV SRQGSDTLFELSINGQFDYRYDQADKLFIIEVKKRTTATASKQYQGKPISLNFQDIPV RTVLQLIADFNNLNLVTTDSVAGNITLRLDGVPWEQALDIILKVRGLDKRLDNNILLV APAEEIATREKQQLESRNQVADLAQLYTEYLQINYAKASEVAALLSSESTKLLSPRGA VSVDERTNVLVVKDTADVISSIKRMLDILDIPVKQVVIEARMVTIDDGFDEALGVRWG VTKNDGHGNSTSGSIAGNDGSGNNNGGSTITRPTADDRLNVNLPVTNAAGTLAFQVAR LADGTLLDLELSALEKESKAEIIASPRVTTANQKPALIEQGTEIPYVESSSSGATSVT FKKAVLSLKVTPQITPDNRVILDLTVTQDTKGETVPTGTGDAVSINAQSITTQVLVNN GETLVLGGIYQQTIKSDVTKVPLLGDIPGLGALFRKTTSENKKRELLIFVTPKIVTDA F" misc_feature 1068457..1069704 /locus_tag="B565_0968" /note="type IV pilus secretin (or competence protein) PilQ; Region: IV_pilus_PilQ; TIGR02515" /db_xref="CDD:162898" misc_feature <1068823..1068948 /locus_tag="B565_0968" /note="Bacterial type II/III secretion system short domain; Region: Secretin_N; pfam03958" /db_xref="CDD:146539" misc_feature 1069228..1069704 /locus_tag="B565_0968" /note="Bacterial type II and III secretion system protein; Region: Secretin; cl02829" /db_xref="CDD:164025" gene 1069911..1070429 /locus_tag="B565_0969" /db_xref="GeneID:10486886" CDS 1069911..1070429 /locus_tag="B565_0969" /codon_start=1 /transl_table=11 /product="Shikimate kinase I" /protein_id="YP_004391621.1" /db_xref="GI:330828669" /db_xref="GeneID:10486886" /translation="MAEKRNIFLIGPMGAGKSTIGRHLAEQLHMEFFDSDHEIERRSG ADIGWVFDVEGEEGFRIREEKVIGELSEQQGIVLATGGGAIKSRETRNKLSARGIVVY LETTIEKQLARTQRDKRRPLLQTEEPAREVLERLAQERNALYEEVADFVVHTDDQSAK IVANQIVKLIGM" misc_feature 1069911..1070420 /locus_tag="B565_0969" /note="shikimate kinase; Reviewed; Region: aroK; PRK00131" /db_xref="CDD:178887" misc_feature 1069926..1070390 /locus_tag="B565_0969" /note="Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the...; Region: SK; cd00464" /db_xref="CDD:30188" misc_feature order(1069950..1069967,1070247..1070249,1070268..1070270, 1070385..1070387) /locus_tag="B565_0969" /note="ADP binding site [chemical binding]; other site" /db_xref="CDD:30188" misc_feature order(1069962..1069964,1070010..1070012,1070016..1070018) /locus_tag="B565_0969" /note="magnesium binding site [ion binding]; other site" /db_xref="CDD:30188" misc_feature order(1070016..1070018,1070088..1070090,1070097..1070099, 1070151..1070159,1070328..1070330) /locus_tag="B565_0969" /note="putative shikimate binding site; other site" /db_xref="CDD:30188" gene 1070444..1071526 /locus_tag="B565_0970" /db_xref="GeneID:10486887" CDS 1070444..1071526 /locus_tag="B565_0970" /codon_start=1 /transl_table=11 /product="3-dehydroquinate synthase" /protein_id="YP_004391622.1" /db_xref="GI:330828670" /db_xref="GeneID:10486887" /translation="MERLKVELGERSYPIEIAAGLLQRPEALVSTIKGKRVMIVTNTV VAPLYLEQVTALLSGFQVEHLILPDGEAYKNLATFEQIMSALLETNHGRDTTLIALGG GVIGDVVGFAAASYQRGIPFIQIPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPKQ VVIDTECLSTLPAREFAAGMAEVIKYGIIWDADFFSWLEQNMVRLQQLEPAALAYAIK RCCEIKADVVGQDETEHGVRALLNLGHTFGHAIEAEQGYGNWLHGEAVSAGTMLAAWT AQARGDMSEADVARVRALLLAANLPIHAPAEMDFSAFIRHMRRDKKVLEGKLRLVLPV GIGHAQVVGDVSDAELLAVIESGRDE" misc_feature 1070477..1071505 /locus_tag="B565_0970" /note="Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis; Region: DHQS; cd08195" /db_xref="CDD:173954" misc_feature order(1070567..1070569,1070747..1070755,1070762..1070764, 1070771..1070773,1070822..1070827,1070831..1070833, 1070888..1070890,1070897..1070899,1070942..1070944, 1070966..1070968,1070987..1070989,1070999..1071001, 1071176..1071178,1071188..1071190,1071227..1071229) /locus_tag="B565_0970" /note="active site" /db_xref="CDD:173954" misc_feature order(1070669..1070671,1070690..1070695,1070774..1070776, 1070783..1070785,1070789..1070797,1070861..1070866, 1070891..1070908) /locus_tag="B565_0970" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173954" misc_feature order(1070987..1070989,1071176..1071178,1071227..1071229) /locus_tag="B565_0970" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173954" gene 1071516..1073096 /locus_tag="B565_0971" /db_xref="GeneID:10486888" CDS 1071516..1073096 /locus_tag="B565_0971" /codon_start=1 /transl_table=11 /product="DamX-like protein" /protein_id="YP_004391623.1" /db_xref="GI:330828671" /db_xref="GeneID:10486888" /translation="MTNKLLKLPSQRQLVDRLLHLIEFNHPFIFLSGKPGCGRGTLCE SLLGVLPEKVRVVSLIGTPAMKMVDVRQLLLPQVVARPLFNPQDALAESFFRMLEGSK PATLLLLIERADQLPAEMLGELWAIIRHNDTLAAPHQLAIIVSGSDVWCRTQRPQLKG RAMPALELEVPPLSPPEQRIFLYEKAKELKIPATLLPKQQVEEILKTANGHPSTIMQL LEDIMTDRRPKKRQAELPVKKIATAIALVAGGLLALSYLLPALFDNESKPALQDPAQN TALPIPVAGGDPLTAGGSNTDAAAQGAQNSDAASNPNGVVKDWQPEAKVLPKSVESET VTTESTNYEGRRVVISDEVVQKLMTEPKVSGALPTDVVDELTGKNPSGTAPSGAIATT APASTAKAQNPVTTATPAATTKTANSEPVAAPAPKVALTPVATLNKKPRNHYSVQLMG ASNTKAVDQFVAEHGLAGKVWVYQTKFRGSPWYVVLQGDYAGLTQAKSAIRKLPPALL KGQPWPKSFAQVQKELKQ" misc_feature 1071591..1071962 /locus_tag="B565_0971" /note="ATPases associated with a variety of cellular activities; Region: AAA; smart00382" /db_xref="CDD:128665" misc_feature <1072566..1073093 /locus_tag="B565_0971" /note="hypothetical protein; Reviewed; Region: PRK11901" /db_xref="CDD:183368" misc_feature 1072833..1073027 /locus_tag="B565_0971" /note="Sporulation related domain; Region: SPOR; cl10051" /db_xref="CDD:186898" gene 1073167..1074039 /locus_tag="B565_0972" /db_xref="GeneID:10486889" CDS 1073167..1074039 /locus_tag="B565_0972" /codon_start=1 /transl_table=11 /product="DNA adenine methyltransferase" /protein_id="YP_004391624.1" /db_xref="GI:330828672" /db_xref="GeneID:10486889" /translation="MKKTRAFLKWAGGKYSLVEEIAERLPAGRVLLEPFVGAGSVFLN TDYDAYVLNDINPDLICLYNHLKLTPDSFIAEARKLFVAEHNHKAAYYRLRTQFNQTE TTFERALLFLFLNRHGFNGLCRYNKKGGFNVPFGSYKKPYFPEKELWAFAEKAQKATF ICESYADAIKRAEEDWVIYCDPPYAPLSTTASFTTYASGGFTLDDQAILARLARHTAA HKGVPVLISNHDIELTRELYRGARLDEILVKRTISRNGGTRNKVAELLALYPPGIEPE QGYYPSDSELLPLT" misc_feature 1073167..1073982 /locus_tag="B565_0972" /note="D12 class N6 adenine-specific DNA methyltransferase; Region: MethyltransfD12; cl00408" /db_xref="CDD:193804" gene complement(1074022..1074216) /locus_tag="B565_0973" /db_xref="GeneID:10486890" CDS complement(1074022..1074216) /locus_tag="B565_0973" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391625.1" /db_xref="GI:330828673" /db_xref="GeneID:10486890" /translation="MAAREKKRRNFNVKGGRKRLECGVNGAIASPPPTTRVLGHRHGP RRAHKKRRPWAPHGLLRQWQ" gene 1074220..1074903 /locus_tag="B565_0974" /db_xref="GeneID:10486891" CDS 1074220..1074903 /locus_tag="B565_0974" /codon_start=1 /transl_table=11 /product="Ribulose-phosphate 3-epimerase" /protein_id="YP_004391626.1" /db_xref="GI:330828674" /db_xref="GeneID:10486891" /translation="MMLMKDFLIAPSILSADFARLGDDVAKVLAAGADVVHFDVMDNH YVPNLTIGPMVCQALRDYGIEAPIDVHLMVKPVDRIIPDFAKAGASLITFHPEASDHV DRSLGLIKEMGCQAGLVLNPATSLSCLEYVMDKLDVILLMSVNPGFGGQSFIPGTLDK LRQVRRLIDESGRDIRLEIDGGVKVDNIREIAEAGADMFVAGSAIFSQPDYKAVIDKM RAELAHVTR" misc_feature 1074241..1074876 /locus_tag="B565_0974" /note="Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative...; Region: RPE; cd00429" /db_xref="CDD:73366" misc_feature 1074244..1074876 /locus_tag="B565_0974" /note="ribulose-phosphate 3-epimerase; Region: rpe; TIGR01163" /db_xref="CDD:130231" misc_feature order(1074253..1074255,1074259..1074261,1074334..1074336, 1074436..1074438,1074655..1074660,1074664..1074669, 1074757..1074759,1074763..1074765,1074823..1074828) /locus_tag="B565_0974" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73366" misc_feature order(1074274..1074276,1074283..1074285,1074343..1074345, 1074349..1074354,1074358..1074360,1074364..1074375, 1074445..1074447,1074457..1074459,1074520..1074522, 1074526..1074531,1074583..1074585,1074592..1074594, 1074598..1074600,1074610..1074612,1074652..1074654, 1074679..1074681,1074685..1074687,1074697..1074699) /locus_tag="B565_0974" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:73366" misc_feature order(1074328..1074330,1074334..1074336,1074430..1074432, 1074757..1074759) /locus_tag="B565_0974" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:73366" gene 1074890..1075558 /locus_tag="B565_0975" /db_xref="GeneID:10486892" CDS 1074890..1075558 /locus_tag="B565_0975" /codon_start=1 /transl_table=11 /product="phosphoglycolate phosphatase" /protein_id="YP_004391627.1" /db_xref="GI:330828675" /db_xref="GeneID:10486892" /translation="MSHAERAFDLVLFDLDGTLIDSAAQLALAVNLTLADLGLEQADE AVIRTWVGNGADKLIQRALAYREADPELFAKARPIFFQHYNACLLQGLAMYDGVAQSL RRLQTLGYKQAIVTNKPSDFVAPILDALGISDCFELWLGGNCVPVKKPSPEPLLHACQ ELGVSPARTLMVGDSENDVLAAKAAGMKVVGLTYGYNYGRPIADSHPDWVFEQFAQLD ALLV" misc_feature 1074914..1075552 /locus_tag="B565_0975" /note="Predicted phosphatases [General function prediction only]; Region: Gph; COG0546" /db_xref="CDD:30892" misc_feature 1075172..1075462 /locus_tag="B565_0975" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature 1075235..1075237 /locus_tag="B565_0975" /note="motif II; other site" /db_xref="CDD:119389" gene 1075601..1076605 /locus_tag="B565_0976" /db_xref="GeneID:10486893" CDS 1075601..1076605 /locus_tag="B565_0976" /codon_start=1 /transl_table=11 /product="Tryptophanyl-tRNA synthetase" /protein_id="YP_004391628.1" /db_xref="GI:330828676" /db_xref="GeneID:10486893" /translation="MTKPIVLSGAQPSGQLTIGNYMGALRQWVNMQDEFDCLYCIVDL HAITTRQDPAALRKACLDAAALYLAVGIDPKKSTVFIQSHVPQHAELGWILNCYTQMG ELSRMTQFKDKSARFENNVNVGLFGYPVLMAADILLYQANQVPVGNDQKQHLELTRDI CTRFNNLYGDVFTMPEPFIPTEGARVMSLQDPTKKMSKSDDNEANFIGLLEDPKQIVK KIKRAVTDSDEPAVVRFDPENKPGVSNLLTLMSGVTGRSIPELELHFEGKMYGHLKTE TAEAVVALLEPIQARFHELRQDEAHLIAILAEGAQKARERAEKTLTSVYDVVGFVPRA " misc_feature 1075607..1076590 /locus_tag="B565_0976" /note="tryptophanyl-tRNA synthetase; Region: trpS; TIGR00233" /db_xref="CDD:188035" misc_feature 1075613..1076452 /locus_tag="B565_0976" /note="catalytic core domain of tryptophanyl-tRNA synthetase; Region: TrpRS_core; cd00806" /db_xref="CDD:173903" misc_feature order(1075619..1075633,1075649..1075651,1075655..1075660, 1075667..1075669,1075718..1075720,1075733..1075735, 1075844..1075846,1075982..1075984,1075994..1075996, 1076003..1076005,1076030..1076032,1076036..1076041, 1076045..1076050,1076057..1076059,1076153..1076155, 1076183..1076188,1076192..1076194) /locus_tag="B565_0976" /note="active site" /db_xref="CDD:173903" misc_feature 1075649..1075660 /locus_tag="B565_0976" /note="HIGH motif; other site" /db_xref="CDD:173903" misc_feature order(1075730..1075732,1075739..1075744,1075862..1075867, 1075871..1075879,1075886..1075891,1075895..1075906, 1075910..1075915,1075970..1075972,1075976..1075981, 1075988..1075993) /locus_tag="B565_0976" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173903" misc_feature 1076183..1076197 /locus_tag="B565_0976" /note="KMSKS motif; other site" /db_xref="CDD:173903" gene 1076724..1076939 /locus_tag="B565_0977" /db_xref="GeneID:10486894" CDS 1076724..1076939 /locus_tag="B565_0977" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391629.1" /db_xref="GI:330828677" /db_xref="GeneID:10486894" /translation="MPVQPTISAEELSDKGHWLRKFRKAKNLNTLQLMVSNAIDKHHK TPAVAAAIYLAECQREREMEQGRYLDR" gene 1076961..1077542 /locus_tag="B565_0978" /db_xref="GeneID:10486895" CDS 1076961..1077542 /locus_tag="B565_0978" /codon_start=1 /transl_table=11 /product="para-aminobenzoate synthase glutamine amidotransferase component II" /protein_id="YP_004391630.1" /db_xref="GI:330828678" /db_xref="GeneID:10486895" /translation="MLLLIDNYDSFTWNLVQYFGALGQEVVVKRNDELTLDAIAQLSP RFLVISPGPCTPNEAGISLDAISHFAGKLPILGVCLGHQSLAQAFGARVVRARQVMHG KTSLIRHRHEGVFKGLNNPLRVTRYHSLVVERDTLPDCFDITAWSEHADGSFDEIMGL RHKTLPVEGVQFHPESILSEQGHQLLANFLARS" misc_feature 1076961..1077539 /locus_tag="B565_0978" /note="para-aminobenzoate synthase component II; Provisional; Region: PRK08857" /db_xref="CDD:181566" misc_feature 1076964..1077530 /locus_tag="B565_0978" /note="Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase; Region: GATase1_Anthranilate_Synthase; cd01743" /db_xref="CDD:153214" misc_feature order(1077111..1077116,1077120..1077122,1077195..1077200, 1077207..1077209,1077339..1077350) /locus_tag="B565_0978" /note="glutamine binding [chemical binding]; other site" /db_xref="CDD:153214" misc_feature order(1077195..1077197,1077477..1077479,1077483..1077485) /locus_tag="B565_0978" /note="catalytic triad [active]" /db_xref="CDD:153214" gene 1077819..1079036 /locus_tag="B565_0979" /db_xref="GeneID:10486896" CDS 1077819..1079036 /locus_tag="B565_0979" /codon_start=1 /transl_table=11 /product="bifunctional N-succinyldiaminopimelate- aminotransferase/acetylornithine transaminase protein" /protein_id="YP_004391631.1" /db_xref="GI:330828679" /db_xref="GeneID:10486896" /translation="MSELLAVTREVFDEVMVPNYAPAKIIPVRGEGSRVWDQEGREYV DFAGGIAVNGLGHCHPKLVEALKTQGEKLWHLSNVMTNEPALRLARKLVAATFADKVY FCNSGAEANEAALKLARRYAIEKFGEQKTQIIAFNQGFHGRTFFTVSVGGQAVYSDGF GPKPGDITHVPYNDLAALAEVISDNTCAVVMEPLQGEGGIIRPTDEFAKGVRELCDKH NALLVYDEVQSGVGRTGDLYAYMGLGVTPDILTSAKALGGGFPIGAMLTTNEIASYLK VGTHGSTYGGNPLACAVAEAVIDVINTPEVLAGIKQREQLFRDGLEAINAKYHCFSEI RGKGLLLGAALSEEYKGRSRDFLLASIDQGLMALVAGTNVVRFAPSLVIPEADIKEGL ARFEKAVAQVVNA" misc_feature 1077822..1079030 /locus_tag="B565_0979" /note="bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed; Region: argD; PRK05093" /db_xref="CDD:179933" misc_feature 1077873..1079015 /locus_tag="B565_0979" /note="Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase...; Region: OAT_like; cd00610" /db_xref="CDD:99735" misc_feature order(1078134..1078142,1078236..1078241,1078245..1078247, 1078392..1078394,1078491..1078493,1078497..1078502, 1078578..1078580) /locus_tag="B565_0979" /note="inhibitor-cofactor binding pocket; inhibition site" /db_xref="CDD:99735" misc_feature order(1078137..1078142,1078236..1078241,1078392..1078394, 1078491..1078493,1078500..1078502,1078578..1078580) /locus_tag="B565_0979" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 1078578..1078580 /locus_tag="B565_0979" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 1079113..1080132 /locus_tag="B565_0980" /db_xref="GeneID:10486897" CDS 1079113..1080132 /locus_tag="B565_0980" /codon_start=1 /transl_table=11 /product="arginine N-succinyltransferase subunit beta" /protein_id="YP_004391632.1" /db_xref="GI:330828680" /db_xref="GeneID:10486897" /translation="MLVIRPIEQKDFAGLKTCAIESGTGMTSLPVNDELLQRKIDAST QTFSDKPAGKGDCLYFFVAEDLETGEMVGTCAIDAAVGLSQPFYNYHIGKVVHSSPKL GIYNVVETLTLSNDYTGNSELCTLFLRECAREGLNGRLLSKHRFLFMAEHPELFDETV FAEMRGVSDANGHSPFYEWLQTHFFSMDFPTVDYLTGIGKKRFIAELMPKYPIYVNLL SKEARAVIGQTHEKTRPAIKMLQDEGFVNRGYVDIFDAGPTVECDVKNIRSVRRSKKL RVLVGEPIGGKTHLICNSRFEHYRACYGNIRVDLDKHEAIIPPKMAAALKVQDGDMVR VVDLD" misc_feature 1079113..1080126 /locus_tag="B565_0980" /note="Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]; Region: AstA; COG3138" /db_xref="CDD:32952" misc_feature 1079116..1080126 /locus_tag="B565_0980" /note="Arginine N-succinyltransferase beta subunit; Region: AstA; cl11440" /db_xref="CDD:196234" gene 1080205..1081674 /locus_tag="B565_0981" /db_xref="GeneID:10486898" CDS 1080205..1081674 /locus_tag="B565_0981" /codon_start=1 /transl_table=11 /product="N-succinylglutamate 5-semialdehyde dehydrogenase 2" /protein_id="YP_004391633.1" /db_xref="GI:330828681" /db_xref="GeneID:10486898" /translation="MSQLVQFIDGQWLAGEGKPFESRDPAKNEVIWQGAAASAAQVDA AVKAARAAFYHWADISLEDRLTIVRRYADLLGEQKEALALTIARETGKPLWETRTEVA AMQGKIAISIRAHDERTGTVENAMPGAKAFVRHKPHGVVAVFGPYNFPGHLPNGHIVP ALIAGNAVVFKPSELTPMVAETMVKVWQEAGLPKGVLNLVQGEVETGKALAGNPDIDG LFFTGSSRTGHFLHQQFAGQPGKILALEMGGNNPLIVKDVSDIDGAVHAIVQSAFITS GQRCTCSRRLFVERGERGDALVNRLVEVVSQIKVGLYDAAEQPFMGSMISEKAALGMV EAQANLQRLGGESLLTLKHLEAGTGFVSPGIIDVTSVSALPDEEYFGPLLQLIRYDDF DAAIDQGNATRYGLSAGLLGDNEADWNHFFKRIRAGIVNWNKPITGASSAAPFGGIGA SGNHRASAYYAADYCAYPVASVEDSKAAMPEQLSPGLTF" misc_feature 1080238..1081569 /locus_tag="B565_0981" /note="Aldehyde dehydrogenase family; Region: Aldedh; pfam00171" /db_xref="CDD:189433" misc_feature 1080361..1081569 /locus_tag="B565_0981" /note="N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like; Region: ALDH_SGSD_AstD; cd07095" /db_xref="CDD:143414" misc_feature order(1080634..1080648,1080670..1080672,1080715..1080717, 1080721..1080726,1080865..1080876,1080883..1080885, 1080892..1080897,1080940..1080948,1081042..1081044, 1081336..1081338,1081342..1081344,1081420..1081422, 1081537..1081539) /locus_tag="B565_0981" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143414" misc_feature order(1080646..1080648,1080940..1080942,1081033..1081035, 1081042..1081044) /locus_tag="B565_0981" /note="catalytic residues [active]" /db_xref="CDD:143414" gene 1081866..1082663 /locus_tag="B565_0982" /db_xref="GeneID:10486899" CDS 1081866..1082663 /locus_tag="B565_0982" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391634.1" /db_xref="GI:330828682" /db_xref="GeneID:10486899" /translation="MQKDIDTLFSHLWDNYIKVTPSALKVHTLLGGGEPIVNDHVAFR TYNLPKLGLEKLAAHFLALGYEQKGEYVFKAKKLYAKHFEHQDPDAPKVFISELKVEE LSLAAQAIIHKLADQVPDHLTDTPAFLYTGAPWQVSYADYQTLLAESEYAAWMAAWGY RANHFTVNINKLKDFDTIHQVNAALKAAGFVLNSVGGEVKGDPQVMLEQSSTMADKAE VPFSDGVRTIPSCFYEFALRYPQADGVLYPGFVEASADKIFESTNAM" misc_feature 1081881..1082654 /locus_tag="B565_0982" /note="Domain of unknown function (DUF1338); Region: DUF1338; cl02226" /db_xref="CDD:194280" gene 1082898..1083158 /locus_tag="B565_0983" /db_xref="GeneID:10486900" CDS 1082898..1083158 /locus_tag="B565_0983" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391635.1" /db_xref="GI:330828683" /db_xref="GeneID:10486900" /translation="MPNYHFFKQGQALTYLDANAPSYSDERRQLVEQGFAAIAAPTFA DTPAEALELLRTHQALQDEANANALCLTVATIPAAIATLSGH" gene complement(1083244..1083846) /locus_tag="B565_0984" /db_xref="GeneID:10486901" CDS complement(1083244..1083846) /locus_tag="B565_0984" /codon_start=1 /transl_table=11 /product="putative phosphatase/hydrolase, CbbY family" /protein_id="YP_004391636.1" /db_xref="GI:330828684" /db_xref="GeneID:10486901" /translation="MSEREQYGFDHYDALIFDMDGTLVDSMPLHLDAWELTCAEFGIP FEREQLYQYGGIPTRKIIAMLAEQQGLTVDVEAFTRRKIALYMEHIDKASVFPKMWEL VRHYHGKVKMGIGTGSPRSQADAILKSSGLDAYISVVVSADDVTNHKPHPDTFLRVAE LLGANPTNCLVFEDTRIGLEAGKAAGMDTVLVIEGDLHPR" misc_feature complement(1083271..1083813) /locus_tag="B565_0984" /note="beta-phosphoglucomutase family hydrolase; Region: PGMB-YQAB-SF; TIGR02009" /db_xref="CDD:162658" misc_feature complement(1083271..1083807) /locus_tag="B565_0984" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature complement(order(1083496..1083501,1083787..1083795)) /locus_tag="B565_0984" /note="active site" /db_xref="CDD:119389" misc_feature complement(1083778..1083795) /locus_tag="B565_0984" /note="motif I; other site" /db_xref="CDD:119389" misc_feature complement(1083499..1083501) /locus_tag="B565_0984" /note="motif II; other site" /db_xref="CDD:119389" gene 1084020..1085396 /locus_tag="B565_0985" /db_xref="GeneID:10486902" CDS 1084020..1085396 /locus_tag="B565_0985" /codon_start=1 /transl_table=11 /product="EmrB/QacA family drug resistance transporter" /protein_id="YP_004391637.1" /db_xref="GI:330828685" /db_xref="GeneID:10486902" /translation="MTSKISPKTIFSSVALVIALGSLEKSIVTTPLPMIGAELHAGAA LTWVVTAYLLAATAVLPLYGKLSDLFGRVRMLNIGIGLFLAGSVACALSQDLPTLLAA RVLQGLGGGGLIALAFTVIADTIPPREVGKYQGYISAVYAVSSIAGPLLGGYFTEQLS WRWIFWINLPLGALAVFLINRNLKQLNVRRHSRFDWKGAGLLITVTTLTLLLLSPEAA LPALWLSAALGVALLLLVLIERRAHDPILPAHLARLPGYLVSVLLVMLSQLLMFAVLV YLPLQMQWQKGMSASESGAIMVIFMICITAGAFVGGKLIGRTGHYKSFVAVGFALAAV ALWQIHFDAWVKLALGFAGIGLGLVLPALSVVVQNALPRQDRGIGMSLFNFGRELGGA VGVAICSMLFHFRLPAGSDGDLSRLAPDLLAPGFSATYIGMALIATVALLITLLALKR HELASISA" misc_feature 1084209..>1084556 /locus_tag="B565_0985" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature <1084833..1085228 /locus_tag="B565_0985" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" gene complement(1085508..1089053) /locus_tag="B565_0986" /db_xref="GeneID:10486903" CDS complement(1085508..1089053) /locus_tag="B565_0986" /codon_start=1 /transl_table=11 /product="pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein" /protein_id="YP_004391638.1" /db_xref="GI:330828686" /db_xref="GeneID:10486903" /translation="MITTDGNNAVASVAYRTSEVIAIYPITPSSAMAEQSSAWSSERG KNLWGDVPRVVEMQSEGGAIAAVHGALQTGALATSFTSSQGLLLMIPNLYKLAGQLIP FVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCASNVQEAQDFALISQVASLNSR LPFIHFFDGFRTSHEIAKIAPLADDTLRALLPADAIRAHRDRALTPDKPVIRGTAANP DTYFQCREASNPWYDAAYGHVSEAMQAFGEQTGRYYRPFEYVGHPQAERIVVLMGSAI GTCEEVIERLLAQGEKVGLVKVRLFRPFSAGHLLAAIPESARTIAVLDRTKEPGAQAE PLYLDVMTALAEAVSRGERASLPRVIGGRYGLSSKEFGPACALAVFAELAQENPRPRF TVGIFDDITGLSLPLAALDSQTPIHSQQHKLEALFYGLGSDGTVSAAKNSIKILGNHT GLYPQGYFVYDSKKAGGLTVSHLRVGERPLQSAYLVEEADFIGCHQWQFVDKYHMAER LKAGGIFLLNTPYSEAEIWQRLPSEVQHALREKEARFYIINAAKIARDCQLGNRINTV MQMAFFQLSAIIPPAEATSLLKQAIATSYGSKGQALVERNWQALEATCAALTRVPLGE LDPASRPRPPVVSAKAPDFVQTVTAAMLAGLGDSLPVSAFPPDGTWPVGTTRWEKRNI AKEIPIWEAELCTQCNYCVAACPHSAIRAKVVEPDALAAAPATLDALDVKSRDMRGQQ YVLQVAPEDCTGCNLCVEVCPAKDRSNPDRKAINMASRLDHLDEQKANYDFFLDLPER SAEQLERIDIRTSQLISPLFEYSGACSGCGETPYIKLLTQLYGDRLLIANATGCSSIY GGNLPTTPYTTNADGRGPAWANSLFEDNAEFGLGFRLTVDQHRERVRRLLASLVDTIP AALREALGDTTLPVSEQRAHIQQLRALLQGSQTPAAQELARDADYLVEKSVWLIGGDG WAYDIGFGGLDHVLSLGENINVLVLDTQCYSNTGGQQSKATPLGAITKFGEQGKRKAR KDLGASVMMYGHVYVAQISLGAQMNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDMAE SHEQMKQLTATGFWPLYRFDPRRADEGKLPLALDSRAPNASLAETLRHEPRFQRLERQ LPEVACQLYEEAEQEANRRFAWLSQLAGKESPAQE" misc_feature complement(1085532..1089053) /locus_tag="B565_0986" /note="pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; Region: pyruv_ox_red; TIGR02176" /db_xref="CDD:131231" misc_feature complement(1088547..1089038) /locus_tag="B565_0986" /note="Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins; Region: TPP_PYR_PFOR_IOR-alpha_like; cd07034" /db_xref="CDD:132917" misc_feature complement(order(1088661..1088666,1088715..1088720, 1088757..1088759,1088769..1088771,1088778..1088780, 1088829..1088831,1088835..1088837,1088844..1088852, 1088856..1088861,1088880..1088891,1088952..1088954, 1088961..1088963,1088973..1088975,1088991..1088996)) /locus_tag="B565_0986" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132917" misc_feature complement(order(1088769..1088771,1088778..1088780, 1088829..1088831,1088835..1088837,1088844..1088852, 1088856..1088861,1088880..1088891,1088952..1088957, 1088973..1088975,1088979..1088984,1088991..1088996)) /locus_tag="B565_0986" /note="PYR/PP interface [polypeptide binding]; other site" /db_xref="CDD:132917" misc_feature complement(order(1088874..1088876,1088979..1088981)) /locus_tag="B565_0986" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132917" misc_feature complement(order(1088724..1088726,1088973..1088975)) /locus_tag="B565_0986" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:132917" misc_feature complement(1087215..1087790) /locus_tag="B565_0986" /note="Pyruvate ferredoxin/flavodoxin oxidoreductase; Region: POR; cl00546" /db_xref="CDD:193862" misc_feature complement(1087005..1087178) /locus_tag="B565_0986" /note="Domain of unknown function; Region: EKR; pfam10371" /db_xref="CDD:192558" misc_feature complement(1086927..1086998) /locus_tag="B565_0986" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" misc_feature complement(1085532..1086608) /locus_tag="B565_0986" /note="TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes. This subfamily also includes proteins characterized as...; Region: TPP_PFOR_PNO; cd03377" /db_xref="CDD:48186" misc_feature complement(order(1086039..1086047,1086051..1086053, 1086057..1086059,1086135..1086146,1086408..1086413, 1086498..1086500,1086567..1086569)) /locus_tag="B565_0986" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:48186" misc_feature complement(order(1085550..1085552,1085604..1085606, 1085613..1085615,1085619..1085621,1085628..1085630, 1085640..1085642,1085790..1085801,1085811..1085816, 1085937..1085939,1085946..1085951,1085961..1085963, 1085973..1085975,1085985..1085987,1085994..1085996, 1086000..1086002,1086021..1086023,1086036..1086041, 1086084..1086086,1086102..1086107,1086117..1086119, 1086165..1086167,1086180..1086182,1086342..1086344, 1086351..1086353,1086360..1086365,1086372..1086377, 1086381..1086386,1086393..1086398,1086405..1086407, 1086414..1086431,1086435..1086443,1086465..1086467, 1086480..1086482,1086522..1086530)) /locus_tag="B565_0986" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48186" gene complement(1089282..1090922) /locus_tag="B565_0987" /db_xref="GeneID:10486904" CDS complement(1089282..1090922) /locus_tag="B565_0987" /codon_start=1 /transl_table=11 /product="Trehalose-6-phosphate hydrolase" /protein_id="YP_004391639.1" /db_xref="GI:330828687" /db_xref="GeneID:10486904" /translation="MNPQPLHTPDIDLESCVIYQIYPMSFQDSDGDGMGDINGIRQRL GYLATLGVDMLWLTPIYRSPKRDNGYDVADYRAIDPAFGTLTEMEQLIAEAAAHGIGI MMDIVANHTSTEHEWFMKALAGDPRYQGYYVFRDQAFVDAHPVTSIFGGSGWQYVPEL DRYYLHNFDASQADLDWDNPAVRAEMAAVINFWLGKGIKGFRFDVIDMVSKEWDRLAM SNGPHLHDYIRELNAASFGGKGIITVGETWGADLAHMQNYSNHDGSEFSMVFNFEHLG LGSDKWSSRFDPLAFKQAMARHQQGLHGQGWNSLFLGNHDLPRAVSRFGDDRPEWRET SAKLWAMVLHMMQGTPFIYQGEELAMTNRHWQPGELRDVEALNYRSSHSGLDPAELSR RLDAIGRDNARTPMQWNGGLHAGFSTTTPWIALNANHVEINADEQLTRPDSPFHCYRQ LIALRKAHPVIRYGNFELLDGDDLERISYRRHWQDPASGERHTLLLLANLTANPLPMP HFDKVADEMRLLLANYPGEPLPLFAPYQCAIWLQVDQG" misc_feature complement(1089297..1090874) /locus_tag="B565_0987" /note="trehalose-6-phosphate hydrolase; Provisional; Region: PRK10933" /db_xref="CDD:182849" misc_feature complement(1089837..1090820) /locus_tag="B565_0987" /note="Alpha amylase, catalytic domain; Region: Alpha-amylase; cl07893" /db_xref="CDD:164103" gene complement(1091123..1091503) /locus_tag="B565_0988" /db_xref="GeneID:10486905" CDS complement(1091123..1091503) /locus_tag="B565_0988" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391640.1" /db_xref="GI:330828688" /db_xref="GeneID:10486905" /translation="MFEIASLKEGMMHGVELFQLLLEIISIACVVIGLGKTLWLAARV RDHQPGFPRIRLCFGSWLILALEFQLAADILATTVAPSKEELIRLAIIAVIRTFLNYF LGKELEAQAEHQQEQRSEQTKAAQ" misc_feature complement(1091189..1091407) /locus_tag="B565_0988" /note="Protein of unknown function (DUF1622); Region: DUF1622; cl01991" /db_xref="CDD:154697" gene complement(1091565..1092485) /locus_tag="B565_0989" /db_xref="GeneID:10486906" CDS complement(1091565..1092485) /locus_tag="B565_0989" /codon_start=1 /transl_table=11 /product="GDXG family lipase" /protein_id="YP_004391641.1" /db_xref="GI:330828689" /db_xref="GeneID:10486906" /translation="METQLEPAIAAMVTEFIAAGRPKASSLSWQERREGYLASAILGG EQEEVGAAEEWQNGHYSVRLYQPASTSSASRPALIYFHGGCFVSGEFDTHDRQMRMLC NRAEALVFAVHTRLAPEHTYPAAHDDALAATLAIMADVEKWHGDPARIALAGDSAGGH LALITTLRLKERGAPLPAAQLLIYPMLDAAGDSDSYRQLGDDYLITRDMLLSGFHAYL GEQPFTHPEASPLHHPALSGLPSTHIVTAEYDPLRDEGEAFYRKLLQAGVTATCQRQL GVIHGFFQLAGVSPAARQLIEQLSLLIRRL" misc_feature complement(1091637..1092254) /locus_tag="B565_0989" /note="alpha/beta hydrolase fold; Region: Abhydrolase_3; pfam07859" /db_xref="CDD:149109" gene complement(1092573..1092899) /locus_tag="B565_0990" /db_xref="GeneID:10486907" CDS complement(1092573..1092899) /locus_tag="B565_0990" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391642.1" /db_xref="GI:330828690" /db_xref="GeneID:10486907" /translation="MSAHPYPEFTFFSRFVADIQAGRKTITIRDESEANWQPGQRLAL FTNPERQPFGTIEVLSVKAVAFDELNDEHARQENMTLPKLKQVIRDIYPALPPLYVIE FQLIEA" misc_feature complement(1092585..1092872) /locus_tag="B565_0990" /note="ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function...; Region: ASCH_yqfb_like; cd06552" /db_xref="CDD:119344" gene complement(1092942..1093613) /locus_tag="B565_0991" /db_xref="GeneID:10486908" CDS complement(1092942..1093613) /locus_tag="B565_0991" /codon_start=1 /transl_table=11 /product="cAMP-binding protein" /protein_id="YP_004391643.1" /db_xref="GI:330828691" /db_xref="GeneID:10486908" /translation="MQQQPYPLGRFHAELQQLEPRFAAALDACTLFLRRYLPGELIMR QGEQSEQLYLVEHGRVSLNSTVHSGRIFQLGEIECHSQIFGEMEFFSATPVQWNVVAE TELDARVICADKLAQRLLTEPELTLFFAAALASDYLDTLEITTSRLLHPIAYNIAYEL WRERQRTPMLGSRKRAHEAARFGTTERVYRRALKELVEQGIVADSSDGPVIADLAKLR AYLDL" misc_feature complement(1093224..1093571) /locus_tag="B565_0991" /note="effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO...; Region: CAP_ED; cd00038" /db_xref="CDD:28920" misc_feature complement(order(1093323..1093331,1093356..1093361)) /locus_tag="B565_0991" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:28920" misc_feature complement(order(1093239..1093247,1093257..1093265)) /locus_tag="B565_0991" /note="flexible hinge region; other site" /db_xref="CDD:28920" gene complement(1093719..1094444) /locus_tag="B565_0992" /db_xref="GeneID:10486909" CDS complement(1093719..1094444) /locus_tag="B565_0992" /codon_start=1 /transl_table=11 /product="Uridine phosphorylase" /protein_id="YP_004391644.1" /db_xref="GI:330828692" /db_xref="GeneID:10486909" /translation="MSLLPHLQCHPDQIAERVVLCGDPARVDRIASQLEQCEVLGQNR EFRLINGRYQGLPITVCSTGIGGASAIIALEELVQAGARSLIRVGSAGALQHDIGLGD LIVVEGAVRNEGASQAYLPAEYPACADIWLQAALLNHVATGSQPHWHGLVRSHDSFYR DDEQEVCRYWHARGVLGADMETASLLTVGRLRKVRVAAVLCNVVLFEQDVQQGVADYA SAEQAMMAGEQHAIAAALYALVQ" misc_feature complement(1093737..1094444) /locus_tag="B565_0992" /note="Uridine phosphorylase [Nucleotide transport and metabolism]; Region: Udp; COG2820" /db_xref="CDD:32648" misc_feature complement(1093731..1094429) /locus_tag="B565_0992" /note="Phosphorylase superfamily; Region: PNP_UDP_1; cl00303" /db_xref="CDD:193757" gene complement(1094448..1095164) /locus_tag="B565_0993" /db_xref="GeneID:10486910" CDS complement(1094448..1095164) /locus_tag="B565_0993" /codon_start=1 /transl_table=11 /product="ribosyl nicotinamide transporter PnuC-like protein" /protein_id="YP_004391645.1" /db_xref="GI:330828693" /db_xref="GeneID:10486910" /translation="MSIFELFSINNTLVTIPLGGGYAMSWIEAIGTLFGLACIWFASQ EKTINYLFGLINVSLFAIIFFQIQLYGLLMLQLFFFCANVYGWYAWTRPANDQGDTLQ IRWLSRSKLMVTAAVSVLAIALLTRYIDPVFATLARTSVSLLNLFGANLAIPEPSPDA FPFWDASMTVLSVVAQILMTRKYVENWILWVVINIISIGVYAAQGVYAMSLEYLILLF IAANGTRLWVIAAKRQPQGL" misc_feature complement(1094463..1095155) /locus_tag="B565_0993" /note="Nicotinamide mononucleotide transporter; Region: NMN_transporter; cl01256" /db_xref="CDD:186405" gene 1095428..1097260 /locus_tag="B565_0994" /db_xref="GeneID:10486911" CDS 1095428..1097260 /locus_tag="B565_0994" /codon_start=1 /transl_table=11 /product="TRAP transporter, DctM-like membrane protein" /protein_id="YP_004391646.1" /db_xref="GI:330828694" /db_xref="GeneID:10486911" /translation="MNSELVWVLCLLAGAIYLFMTNKVRMDVVALGVVILFVLSGTLT LPEALAGFSDPNVILIAALFVVGEGLVRTGIAYQVGDALVKVAGSSETKLLVLLMVAV ASLGAVMSSTGVVAIFIPVVLSVANRMGIPAGRLMMPLGFAGLISGMMTLVATPPNMV VNSELMRHGIHGFTFFSFTPLGTLILLCGIVYMLLVRGSLVGEGEEGKGKQSGRRTFR DLIRDYRLTGRARRLALRPDSPLIGHTLDELQLRARYGAHVIGVERWRKFRRVMVPVS GISEFQARDVLLIDMSDPEIDIREFCSEARLEPMILRGEYFSDQAREVGMAEVSLIPE SKLLGKSVREVTFRSSYGLSVVGLRRDGEALAGKLVDEPLQMGDTLLVVGNWSHIRQL QTHSRDFLLMGLPAEVDEMAPARSQAIHALFCLGVMILLMVTDPVPNVIAALIACLLM GKFRCIDMESAYKSIHWPTLILIVGMLPFALALQKTGGVDLIVGGLINAVGEMGPRVM LASLFALCAVIGLFISNTATAVLMAPIALGTAQQMGVSPYPFAMTIAIAASAAFMTPV SSPVNTLVLGPGNYKFADFIRIGVPFTLLVMAVSVVAIPWFFPF" misc_feature 1095452..>1096030 /locus_tag="B565_0994" /note="Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is...; Region: SLC13_permease; cd01115" /db_xref="CDD:73247" misc_feature order(1095473..1095484,1095503..1095544,1095587..1095640, 1095710..1095760,1095764..1095817,1095827..1095898, 1095962..1096006,1096019..1096030) /locus_tag="B565_0994" /note="transmembrane helices; other site" /db_xref="CDD:73247" misc_feature 1095488..1097257 /locus_tag="B565_0994" /note="Di- and tricarboxylate transporters [Inorganic ion transport and metabolism]; Region: CitT; COG0471" /db_xref="CDD:30819" misc_feature 1096136..1096339 /locus_tag="B565_0994" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature 1096403..1096606 /locus_tag="B565_0994" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature <1096679..1097251 /locus_tag="B565_0994" /note="Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is...; Region: SLC13_permease; cd01115" /db_xref="CDD:73247" gene complement(1097478..1097561) /locus_tag="B565_t027" /db_xref="GeneID:10486912" tRNA complement(1097478..1097561) /locus_tag="B565_t027" /product="tRNA-Leu" /db_xref="GeneID:10486912" gene complement(1097570..1097646) /locus_tag="B565_t028" /db_xref="GeneID:10490012" tRNA complement(1097570..1097646) /locus_tag="B565_t028" /product="tRNA-Met" /db_xref="GeneID:10490012" gene complement(1097686..1097760) /locus_tag="B565_t029" /db_xref="GeneID:10490013" tRNA complement(1097686..1097760) /locus_tag="B565_t029" /product="tRNA-Gln" /db_xref="GeneID:10490013" gene complement(1097802..1097876) /locus_tag="B565_t030" /db_xref="GeneID:10490014" tRNA complement(1097802..1097876) /locus_tag="B565_t030" /product="tRNA-Gln" /db_xref="GeneID:10490014" gene complement(1097923..1097997) /locus_tag="B565_t031" /db_xref="GeneID:10490015" tRNA complement(1097923..1097997) /locus_tag="B565_t031" /product="tRNA-Gln" /db_xref="GeneID:10490015" gene complement(1098006..1098082) /locus_tag="B565_t032" /db_xref="GeneID:10490016" tRNA complement(1098006..1098082) /locus_tag="B565_t032" /product="tRNA-Met" /db_xref="GeneID:10490016" gene complement(1098317..1099408) /locus_tag="B565_0995" /db_xref="GeneID:10490017" CDS complement(1098317..1099408) /locus_tag="B565_0995" /codon_start=1 /transl_table=11 /product="putative GTP-binding protein with nucleoside triP hydrolase domain" /protein_id="YP_004391647.1" /db_xref="GI:330828695" /db_xref="GeneID:10490017" /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV PMPDPRLDQLAAIINPQRVVPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETEAIGH VVRCFDDENIIHVAGKVSPADDIEVINTELALSDLDACERAIHRQSKRAKGGDKDAKL EVEVLEKIKVALENGQMIRGMKLDKEELAAVSHLNFLTLKPTMYIANVAEDGFENNPY LDKVREIAAAENAVVVVVCCAIEADIAELDDEDRAEFMADLGIEEPGLNRVIRSGYQL LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTIAFEDFINYKGEQ GAKEAGKMRAEGKDYIVKDGDIMNFLFNV" misc_feature complement(1098320..1099408) /locus_tag="B565_0995" /note="GTP-binding protein YchF; Reviewed; Region: PRK09601" /db_xref="CDD:181981" misc_feature complement(1098578..1099396) /locus_tag="B565_0995" /note="YchF subfamily. YchF is a member of the Obg family, which includes four other subfamilies of GTPases: Obg, DRG, Ygr210, and NOG1. Obg is an essential gene that is involved in DNA replication in C. crescentus and Streptomyces griseus and is associated...; Region: YchF; cd01900" /db_xref="CDD:133300" misc_feature complement(1099361..1099384) /locus_tag="B565_0995" /note="G1 box; other site" /db_xref="CDD:133300" misc_feature complement(order(1098692..1098700,1098779..1098781, 1098785..1098790,1099358..1099369,1099373..1099375)) /locus_tag="B565_0995" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133300" misc_feature complement(1099292..1099315) /locus_tag="B565_0995" /note="Switch I region; other site" /db_xref="CDD:133300" misc_feature complement(1099301..1099303) /locus_tag="B565_0995" /note="G2 box; other site" /db_xref="CDD:133300" misc_feature complement(order(1099121..1099150,1099169..1099198)) /locus_tag="B565_0995" /note="Switch II region; other site" /db_xref="CDD:133300" misc_feature complement(1099184..1099195) /locus_tag="B565_0995" /note="G3 box; other site" /db_xref="CDD:133300" misc_feature complement(1098779..1098790) /locus_tag="B565_0995" /note="G4 box; other site" /db_xref="CDD:133300" misc_feature complement(1098692..1098700) /locus_tag="B565_0995" /note="G5 box; other site" /db_xref="CDD:133300" misc_feature complement(1098326..1098574) /locus_tag="B565_0995" /note="TGS_YchF_C: This subfamily represents TGS domain-containing YchF GTP-binding protein, a universally conserved GTPase whose function is unknown. The N-terminal domain of the YchF protein belongs to the Obg-like family of GTPases, and some members of the...; Region: TGS_YchF_C; cd04867" /db_xref="CDD:133440" gene complement(1099525..1100121) /locus_tag="B565_0996" /db_xref="GeneID:10486913" CDS complement(1099525..1100121) /locus_tag="B565_0996" /codon_start=1 /transl_table=11 /product="peptidyl-tRNA hydrolase" /protein_id="YP_004391648.1" /db_xref="GI:330828696" /db_xref="GeneID:10486913" /translation="MTSEIKLIVGLGNPGPEYAKTRHNAGAWYVEQLARWHNVSLREE PKFFGHTARILVEGQDVRLLIPNTYMNLSGKAVAALARFYQIEPEAILVAHDELDLPP GIAKFKQGGGHGGHNGLKDIIAKMGNNNNFFRLRLGIGHPGSKELVAGFVLTKAPSSE QNLIDAALDESLRATDILFKQDMTKAMNRLHSFKAEKG" misc_feature complement(1099597..1100103) /locus_tag="B565_0996" /note="Peptidyl-tRNA hydrolase (PTH) is a monomeric protein that cleaves the ester bond linking the nascent peptide and tRNA when peptidyl-tRNA is released prematurely from the ribosome. This ensures the recycling of peptidyl-tRNAs into tRNAs produced through...; Region: PTH; cd00462" /db_xref="CDD:73208" misc_feature complement(order(1099774..1099776,1099834..1099836, 1099912..1099917,1100053..1100055,1100083..1100085)) /locus_tag="B565_0996" /note="putative active site [active]" /db_xref="CDD:73208" misc_feature complement(1100053..1100055) /locus_tag="B565_0996" /note="catalytic residue [active]" /db_xref="CDD:73208" gene complement(1100340..1102328) /locus_tag="B565_0997" /db_xref="GeneID:10486914" CDS complement(1100340..1102328) /locus_tag="B565_0997" /codon_start=1 /transl_table=11 /product="5'-nucleotidase/2',3'-cyclic phosphodiesterase" /protein_id="YP_004391649.1" /db_xref="GI:330828697" /db_xref="GeneID:10486914" /translation="MNCLRPLLLATLTSALFACQPAKENPPFVLTLAHMNDTHSQFDP VNAEIKGQIFAQQGETDTLYTRFGGYPRLLTMAKAYQADALAKNQPLLLLHGGDAWQG SGYFKLNEGMANAELLSQFGLDAMALGNHEFDLDNQKLARFIEGVNFPVLAANLDTKA DPALSKADNLKPFVVYAFDGNQKSPVTDLDNLPQGKQLVAVIGLVLEDMGNIAPNVGK LRFGKEVASAQATVDMLQAKGIHQIVALTHIGNERDLALAAKVNGIDAIVGGHSHSLL GDFRNIGWGKTGDYAKLVTNPDGIGKTCVVQAGSYAQAIGLAQVTFDSQGQVTDCQGH NSLLASRDFFADAARKQALDDARSKEASQFVDNQPNMVTVDEDPRLRGIIDSHYKPAL EQAYGPVIGTIPEQLQNARRPGDNGSDSHGSDVAPLVAEGEFYWANTPAVQALTGGPV DFSLVAVGGVRADLPAGEWREGDSALTLLPFKNQLSVLTLTGAEVRALLTETITATLP ASAHAGKFPYGGHLRYTFKETDAGKAGTLTQLQRKTASGEWQDLVDSQRYRVVMNAYS ANGNDGWQALANAQRQKSERVDIASVNGKLTAFPVLKVAQNGELLSAVYAPGQPLDCK ASGMDCGTDAASFVEYVRDARPTLTALDEETVTLLRTK" misc_feature complement(1100601..1102241) /locus_tag="B565_0997" /note="NAD pyrophosphatase/5'-nucleotidase NadN; Region: nadN; TIGR01530" /db_xref="CDD:130593" misc_feature complement(1101330..1102241) /locus_tag="B565_0997" /note="metallophosphatase superfamily, metallophosphatase domain; Region: MPP_superfamily; cl13995" /db_xref="CDD:196777" misc_feature complement(order(1101516..1101518,1101585..1101587, 1101936..1101941,1102035..1102037,1102212..1102214, 1102218..1102220)) /locus_tag="B565_0997" /note="active site" /db_xref="CDD:163614" misc_feature complement(order(1101516..1101518,1101585..1101587, 1101939..1101941,1102035..1102037,1102212..1102214, 1102218..1102220)) /locus_tag="B565_0997" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163614" misc_feature complement(1100595..1101134) /locus_tag="B565_0997" /note="5'-nucleotidase, C-terminal domain; Region: 5_nucleotid_C; pfam02872" /db_xref="CDD:190457" gene complement(1102445..1103392) /locus_tag="B565_0998" /db_xref="GeneID:10486915" CDS complement(1102445..1103392) /locus_tag="B565_0998" /codon_start=1 /transl_table=11 /product="ribose-phosphate pyrophosphokinase" /protein_id="YP_004391650.1" /db_xref="GI:330828698" /db_xref="GeneID:10486915" /translation="MPDMKLFAGNATPELAQKIADRLFIKLGNAAVGRFSDGEISVQI NENVRGGDIFIIQSTCAPTNDNLMELIVMVDALRRASAGRITAVIPYFGYARQDRRVR SARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPVLLEDMKSKN LESPVVVSPDIGGVVRARAIAKLLDDTDIAIIDKRRPRPNVSQVMHLIGDVAGRDCII VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPVFSGSAVENIKNSVIDELIITDSIP LTAEMKAVGKVKQLTLSTVLAEAIRRISNEESISAMFEH" misc_feature complement(1102454..1103389) /locus_tag="B565_0998" /note="ribose-phosphate pyrophosphokinase; Provisional; Region: PRK04923" /db_xref="CDD:179893" misc_feature complement(1102451..1103383) /locus_tag="B565_0998" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene complement(1103590..1103664) /locus_tag="B565_t033" /db_xref="GeneID:10486916" tRNA complement(1103590..1103664) /locus_tag="B565_t033" /product="tRNA-Gln" /db_xref="GeneID:10486916" gene complement(1103666..1104514) /locus_tag="B565_0999" /db_xref="GeneID:10490018" CDS complement(1103666..1104514) /locus_tag="B565_0999" /codon_start=1 /transl_table=11 /product="4-diphosphocytidyl-2-C-methyl-D-erythritol kinase" /protein_id="YP_004391651.1" /db_xref="GI:330828699" /db_xref="GeneID:10490018" /translation="MASTRWPAPAKLNLFLHVNGRRPDGYHELQTLFIFLNHSDWLEF EVIPNSDTLTLNPAIPGVPDEQNLIIRAARLLQATLPSPQGAHIRLEKVLPMGGGIGG GSSDAATTLVALNHLWQAGLSEDELAALGVQLGADVPVFVRGKAAFAEGVGERLQPVE LPDAWYLVLKPDCHVATAAVFQDPDLPRATPKMALDNLLEGEWKNDCESLVKKRHPEV ANALGWLLEYAPSRMTGTGACVFAQFEDEVTAREVLACVPKGLDGFVAKGENISPLFS TLQQFK" misc_feature complement(1103711..1104514) /locus_tag="B565_0999" /note="4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional; Region: ipk; PRK00343" /db_xref="CDD:178981" misc_feature complement(1104080..1104256) /locus_tag="B565_0999" /note="GHMP kinases N terminal domain; Region: GHMP_kinases_N; cl08256" /db_xref="CDD:195670" gene complement(1104514..1105092) /locus_tag="B565_1000" /db_xref="GeneID:10486917" CDS complement(1104514..1105092) /locus_tag="B565_1000" /codon_start=1 /transl_table=11 /product="outer-membrane lipoprotein lolB" /protein_id="YP_004391652.1" /db_xref="GI:330828700" /db_xref="GeneID:10486917" /translation="MLLRIFTLTCLLLLAGCATTQPQRDQVNWNQERTRLEQLTHWQL SGKMAIITPQQKGSARLNWQQDGEDYRLNLTSLIGTSILELSRSKGEITLLDSDGNRH QSQDAEALIYQLTGWNIPVAGLPEWIKGLPGQAEFELNPDSSLASVRDGQWQIVYGDY RDQDGYRLPHQLTMTGQNSRLKLQINQWTLAR" misc_feature complement(1104532..1104981) /locus_tag="B565_1000" /note="Outer membrane lipoprotein LolB; Region: LolB; pfam03550" /db_xref="CDD:112372" gene 1105219..1106478 /locus_tag="B565_1001" /db_xref="GeneID:10486918" CDS 1105219..1106478 /locus_tag="B565_1001" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA reductase" /protein_id="YP_004391653.1" /db_xref="GI:330828701" /db_xref="GeneID:10486918" /translation="MSLLALGINHNTASVALRERVAFGPDCIDRALRELVSQPGVSEA VIVSTCNRTELYCNLEEERQEQVLCWLQQFHGLDAAELVTAIYQHHDEEAVRHLMRVA CGLDSLVLGEPQILGQIKQSYAHAQQAESVKGALERLFQKSFSVAKRVRTDTEIGASA VSVAFAAVSLGRRIFSDLSQTKVLLVGAGETIELVARHLREQNVTKMMVANRTLQRAQ TLAAEFGAQVMTLEEIPDYLHEADIVISSTASPLPIIGKGMVERALKARRFKPMFLVD IAVPRDIEAEVDELSDAYLYTVDDLQGIIEQNLETRKRAAAQAEVIVQEERDEFMGWY RGQSSVDLIRDYRHQSQQVADEELQRALLALAQGESAEQALKAMAHRLTNKLIHAPTQ ALRQAASQGDQSELSRLRQALGLSQEP" misc_feature 1105219..1106472 /locus_tag="B565_1001" /note="glutamyl-tRNA reductase; Reviewed; Region: hemA; PRK00045" /db_xref="CDD:178819" misc_feature 1105225..1106157 /locus_tag="B565_1001" /note="NADP-binding domain of glutamyl-tRNA reductase; Region: NAD_bind_Glutamyl_tRNA_reduct; cd05213" /db_xref="CDD:133452" misc_feature order(1105273..1105275,1105363..1105365,1105558..1105560, 1105567..1105569,1105579..1105581,1105588..1105590, 1105600..1105602) /locus_tag="B565_1001" /note="tRNA; other site" /db_xref="CDD:133452" misc_feature order(1105363..1105368,1105372..1105374,1105537..1105539, 1105552..1105554,1105558..1105560,1105570..1105572) /locus_tag="B565_1001" /note="putative tRNA binding site [nucleotide binding]; other site" /db_xref="CDD:133452" misc_feature order(1105777..1105779,1105783..1105785,1105792..1105794) /locus_tag="B565_1001" /note="putative NADP binding site [chemical binding]; other site" /db_xref="CDD:133452" misc_feature 1106200..1106463 /locus_tag="B565_1001" /note="Glutamyl-tRNAGlu reductase, dimerisation domain; Region: GlutR_dimer; pfam00745" /db_xref="CDD:189697" gene 1106530..1107618 /locus_tag="B565_1002" /db_xref="GeneID:10486919" CDS 1106530..1107618 /locus_tag="B565_1002" /codon_start=1 /transl_table=11 /product="peptide chain release factor 1" /protein_id="YP_004391654.1" /db_xref="GI:330828702" /db_xref="GeneID:10486919" /translation="MNPSLIRKLEGLIERHEEVQAMLGEPDVVSDQDRYRALTREYAQ LEDIVHAFQRYRQAQDDLETTQMMLEEDDADLREMAQEELPLAKANLEALEQELQLML LPKDPKDDNNCYLEIRAGAGGDEAAIFAGDLFRMYSRFAERQGWRVSIVSCNDGEYGG YKEVIAKIDGERVYGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIE INPSDLKIDTFRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVL SARLQAAEDERHRAAEQSTRRNLVGSGDRSERIRTYNYPQGRLSEHRINLTLYRLSEI LEGDLDCVITPLVQEYQADQLASLAENN" misc_feature 1106533..1107609 /locus_tag="B565_1002" /note="peptide chain release factor 1; Validated; Region: prfA; PRK00591" /db_xref="CDD:179074" misc_feature 1106725..1107069 /locus_tag="B565_1002" /note="RF-1 domain; Region: RF-1; cl02875" /db_xref="CDD:194471" misc_feature 1107157..1107498 /locus_tag="B565_1002" /note="RF-1 domain; Region: RF-1; cl02875" /db_xref="CDD:194471" gene 1107680..1108531 /locus_tag="B565_1003" /db_xref="GeneID:10486920" CDS 1107680..1108531 /locus_tag="B565_1003" /codon_start=1 /transl_table=11 /product="protein-(glutamine-N5) methyltransferase" /protein_id="YP_004391655.1" /db_xref="GI:330828703" /db_xref="GeneID:10486920" /translation="MQIQQARAHIMTVLAEGESPRADADVLLCHLLGCRRSYLMTWPE HELDAAQQATLQGWLARRLNGEPIAHLVGEREFWSLPLKVSPATLIPRPDTEVLVEQA LTRIPQGPCAVLDLGTGTGAIALALKSERPEIDVWAVDRMADAAALARENSVALGLPI EVRDGSWFEPLGEPDRDETPRFAVIVSNPPYIDGADPHLEQGDVRFEPRSALVADDAG LADIRHIVAHAPAYLLADGWLLLEHGWDQGEAVRQLLRDGGYREVATVRDYGDNDRVT LGLCPLR" misc_feature 1107746..1108510 /locus_tag="B565_1003" /note="protein-(glutamine-N5) methyltransferase, release factor-specific; Region: RF_mod_PrmC; TIGR03534" /db_xref="CDD:188335" misc_feature 1107806..1108411 /locus_tag="B565_1003" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene 1108588..1108971 /locus_tag="B565_1004" /db_xref="GeneID:10486921" CDS 1108588..1108971 /locus_tag="B565_1004" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="YP_004391656.1" /db_xref="GI:330828704" /db_xref="GeneID:10486921" /translation="MVFVLKHLHLTLIAGAVLMFMLRFYWVQTATGRAYSAPVMKVSG WLNGLVVLSGVLLCMVLDLNPLNNGTPWLSEKLMAILVLVFLAAMALRLAKSNLVRWC SFLGALGWIYFIAKLAVLKQTSVFG" misc_feature 1108588..1108953 /locus_tag="B565_1004" /note="Invasion gene expression up-regulator, SirB; Region: SirB; cl01184" /db_xref="CDD:186378" gene 1108984..1109784 /locus_tag="B565_1005" /db_xref="GeneID:10486922" CDS 1108984..1109784 /locus_tag="B565_1005" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391657.1" /db_xref="GI:330828705" /db_xref="GeneID:10486922" /translation="MLHIDEWTDFEAHDITELALSVSDEIYGSVEEGMRELNLLDEWL DEQIEEGTCDEVRQQLLQGFYHSLGFHGDWQDYFSANNCDLNQVLVQRKGIPVSLGIL IIQLGRKLGLDVEGICFPGHFLVSFAGGEGEVYVDPFTGDELSLARIELLLRGALGDL ATLTPDYLQPSGQWEIIERLLNVSKGALLREDRMPEALRCSELLLRMKPGDPLETRDR GFIYEQLDCPRQAADDFEYFIEQCPDDPVADVLKVQLAALDLSPKPLH" misc_feature 1109005..1109781 /locus_tag="B565_1005" /note="Uncharacterized conserved protein [Function unknown]; Region: COG2912" /db_xref="CDD:32736" misc_feature 1109044..1109781 /locus_tag="B565_1005" /note="hypothetical protein; Provisional; Region: PRK10941" /db_xref="CDD:182854" gene 1109882..1110736 /locus_tag="B565_1006" /db_xref="GeneID:10486923" CDS 1109882..1110736 /locus_tag="B565_1006" /codon_start=1 /transl_table=11 /product="2-dehydro-3-deoxyphosphooctonate aldolase" /protein_id="YP_004391658.1" /db_xref="GI:330828706" /db_xref="GeneID:10486923" /translation="MEQKNIKINQIDVANDKPFVLFGGMNVLESRDMAMAVCEKYVEV TSKLGIPFVFKASWDKANRSSIHSYRGPGLEEGMKIFQELKATFGMPVISDLHEPHQA KPVAEVVDVIQLPAFLARQTDLVEAMARTGNVINIKKPQFLSPSQMKNITDKFEECGN DQLILCERGANFGYDNLVVDMLGLGVMKKSTGGYPVIFDVTHSLQCRDPLGAASGGRR EQVTELARAGMAVGLAGLFIESHPDPKIARCDGPSALPLEKLEGFLKQMKAIDDLIKG FEPLDTSA" misc_feature 1109906..1110706 /locus_tag="B565_1006" /note="DAHP synthetase I family; Region: DAHP_synth_1; pfam00793" /db_xref="CDD:189723" misc_feature 1109906..1110703 /locus_tag="B565_1006" /note="NeuB family; Region: NeuB; cl00496" /db_xref="CDD:186036" gene 1111038..1112318 /locus_tag="B565_1007" /db_xref="GeneID:10486924" CDS 1111038..1112318 /locus_tag="B565_1007" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate transport protein" /protein_id="YP_004391659.1" /db_xref="GI:330828707" /db_xref="GeneID:10486924" /translation="MRKKLFSSLYFQVLLAITLGVFLGHVYPELGADMKPLGDGFVKL IKMIIAPVIFCTVVTGIAGMESMKAVGKTGAIALLYFEVVSTIALIIGLCVVNLLQPG AGMNVDPAALDASAISAYAEQAKSQGIIAFLLDIIPGSVIGAFASGNILQVLLFAVLF GFSLHHIGEKGQVIFGVIDSFSKVIFGIINMIMRLAPVGAFGAMAFTIGKYGVGSLVQ LGQLIACFYLTCLFFIFIVLGSIAKASGFSILRFISYIREELLIVLGTSSSESVLPRM LDKMEKLGCQKSVVGLVIPTGYSFNLDGTSIYLTMAAIFIAQATNTPLDLFQQITLLV VLLISSKGAAGVTGSGFIVLAATISAVGHLPLAGLALILGIDRFMSEARALTNLIGNG VATVVVAKYCKQLDEKKMDAVLGGKVGQLEADRA" misc_feature 1111038..1112288 /locus_tag="B565_1007" /note="Sodium:dicarboxylate symporter family; Region: SDF; cl00573" /db_xref="CDD:193876" gene complement(1112437..1112817) /locus_tag="B565_1008" /db_xref="GeneID:10486925" CDS complement(1112437..1112817) /locus_tag="B565_1008" /codon_start=1 /transl_table=11 /product="formate C-acetyltransferase glycine radical" /protein_id="YP_004391660.1" /db_xref="GI:330828708" /db_xref="GeneID:10486925" /translation="MIKGIQITQAANTALLNSFWLLDEEKQQARCICVKGDAFAADQE VQLADLGQFEYRELPVQAEPAVEGGQHLNVNVLRRETLEDAIENPEKYPQLTIRVSGY AVRFNALTPEQQRDVVTRTFTQSL" misc_feature complement(1112452..>1112616) /locus_tag="B565_1008" /note="Ribonucleotide reductase and Pyruvate formate lyase; Region: RNR_PFL; cl09939" /db_xref="CDD:186877" gene 1113184..1113918 /locus_tag="B565_1009" /db_xref="GeneID:10486926" CDS 1113184..1113918 /locus_tag="B565_1009" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter/signal transduction systems periplasmic component-like protein" /protein_id="YP_004391661.1" /db_xref="GI:330828709" /db_xref="GeneID:10486926" /translation="MNNGWRKWAWLALFCCWASSVAVRAETVRIAVGEWPPYISEAQP NQGFLCEVVRQAFAEEGLDVSFHFYSWAEAYRLTLEGRYVVTMPWFRSREQLFYLSAS LGHFTTRLMTLTGTPAVNLGELKHEPVGVTRGYFYGDGFAARQAGLTLEWSDSDEESM GKLLDGRIHYLVMDEQVAQTLFQQALVRHPQSLSLTGAADPIWSQPGYLLMRKADPEA RPLMLLFNTGLRKLERSGCLARLWKA" misc_feature 1113265..1113912 /locus_tag="B565_1009" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature 1113265..1113912 /locus_tag="B565_1009" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature order(1113289..1113291,1113394..1113396,1113460..1113462, 1113589..1113591,1113703..1113705) /locus_tag="B565_1009" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(1113652..1113654,1113664..1113666,1113682..1113684) /locus_tag="B565_1009" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 1113790..1113807 /locus_tag="B565_1009" /note="hinge residues; other site" /db_xref="CDD:29040" gene 1113988..1114665 /locus_tag="B565_1010" /db_xref="GeneID:10486927" CDS 1113988..1114665 /locus_tag="B565_1010" /codon_start=1 /transl_table=11 /product="Uracil-DNA glycosylase" /protein_id="YP_004391662.1" /db_xref="GI:330828710" /db_xref="GeneID:10486927" /translation="MLTWSDVIGSEKEQDYFKSTLATVRAEREAGKVIYPPATDVFNA FKLTELDQVKVVILGQDPYHGPNQAHGLCFSVLPGVRTPPSLVNIYKEMQRDLPGFVT PNHGFLESWAKQGVLLLNTVLTVQAGQAHSHAHLGWETFTDRVIEQINASCQGVVFLL WGAHAQKKGRFIDRQRHYVLTAPHPSPLSAHRGFIGCGHFSETNRLLEQQGKSPIEWK SVCIPLD" misc_feature 1113988..1114638 /locus_tag="B565_1010" /note="Uracil DNA glycosylase superfamily; Region: UDG; cl00483" /db_xref="CDD:193838" gene 1114736..1115287 /locus_tag="B565_1011" /db_xref="GeneID:10486928" CDS 1114736..1115287 /locus_tag="B565_1011" /codon_start=1 /transl_table=11 /product="Hemerythrin HHE cation binding domain subfamily" /protein_id="YP_004391663.1" /db_xref="GI:330828711" /db_xref="GeneID:10486928" /translation="MLSSLHKDHLNIARLLELLKHKLAAIRAEEPISYFLVRDVIDYL REVSDKYHHPKEDLIYDYYLKYRVVEGEVANRLQEEHVKLLEAGADLKEMVEMILMDA VIPLDQFTTKLERFVELQEAHMNYEEGVIFPHLRDSLTEDDWRHLEQNWQNRAIGDPL FGAEVSQHFQALAKRLSLPLTTG" misc_feature 1114742..1115263 /locus_tag="B565_1011" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3945" /db_xref="CDD:33726" gene complement(1115388..1117868) /locus_tag="B565_1012" /db_xref="GeneID:10486929" CDS complement(1115388..1117868) /locus_tag="B565_1012" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391664.1" /db_xref="GI:330828712" /db_xref="GeneID:10486929" /translation="MFRKTLLSVALGSALFGLTACNDNQTESSTVAKPEQAIQYKDVI DRRGTPTQFRDFDSYSNLKYNPLLDLGAWHGFLLPASDKEWGGFTGPMVISEEYSLFF ASELDKLTLSDASGRPFPLTSARKQEVYAIPGALVQRFEFEPFTLELELRYGDARTAL IRTRLINQTDAPLTLNLNWQGELLNQWDAKDTIASKYPGWTRTISESDKGIEFQFGKL RSTWNIMQSGSARYRIDRTLPSRTTLDQKTLGYQSDASITLAAKGSEDIYTLQSYLHS EDDASRHQQSRQALLANPASYFADSIRRWEGYLAKGLSNQGIPESERRIAVKAMETLN GNWRSPAGAILHDGVTPSNTARWFDGVWAWDSWKHAYAMAHFNPEVAKNNVRAMYDYQ VQPDDPVRPQDAGMVIDAVFYNKLADRGGDGGNWNERDTKPPLSAWAIWEIYSATKDK AFIAEMYPKLQAYHDWWYRARDNNRNGIIEYGATKHVEHNDEYGNITFMVQYSNGIPA GLDLSSCTSEGDGWYACAGMPLYQQVLNVGGYSDMDIGAQHGAGWESGMDNAARFGFI EPGQLQRYADKTYGGDLAKARQDWNVTFFENHQDNGDLIGFSIDQESVELNAFLAKEK RILADMADLLGKPDDASRYRDGATQLAGYINSCMFDEASGFYYDRQIAQGDVADGNGC VGKLLTARGRGPEGWSPLWAEVADKEKAARVREVMLNAQEFNTKIPLGTAALTNPAYD PNIYWRGRVWLDQFYFGVKGLENYGYRSDAEALVNKLFNNAEGLAGSGPIRENYNPET GAMQGASNFSWSSAHLYMLYRNFLKPQA" misc_feature complement(1115400..1117865) /locus_tag="B565_1012" /note="alpha-glucosidase; Provisional; Region: PRK10137" /db_xref="CDD:182261" misc_feature complement(1115448..>1116029) /locus_tag="B565_1012" /note="Bacterial alpha-L-rhamnosidase; Region: Bac_rhamnosid; cl01801" /db_xref="CDD:197423" gene complement(1118064..1118864) /locus_tag="B565_1013" /db_xref="GeneID:10486930" CDS complement(1118064..1118864) /locus_tag="B565_1013" /codon_start=1 /transl_table=11 /product="AraC/XylS family transcriptional regulator" /protein_id="YP_004391665.1" /db_xref="GI:330828713" /db_xref="GeneID:10486930" /translation="MSTPLLQQSHYLGIRRQPLHRVLIYAPTLIWVTQGSKQLWWRER RLSFDREHWLLIPAGHQLTFVNQPEQGKFRSHAITLLTPPPQEWLAESAPSHADLEEP AVKVTPGLAFCFELISTMAERGLSEATQAELLRGFYAELRAANALGLLFPASTMTLAE RLARYLAVEPGIDHTLEAVAPHFSMSRASMVRKLAAEGRSFRQLLAQVRMSHALNLLQ QGLTPLEVALACGYDSPSRFAARFKQEFGLTPHQYLHTCPARLASNGK" misc_feature complement(1118103..1118348) /locus_tag="B565_1013" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:128636" misc_feature complement(1118100..1118216) /locus_tag="B565_1013" /note="Bacterial regulatory helix-turn-helix proteins, AraC family; Region: HTH_AraC; pfam00165" /db_xref="CDD:143933" gene complement(1118876..1119412) /locus_tag="B565_1014" /db_xref="GeneID:10486931" CDS complement(1118876..1119412) /locus_tag="B565_1014" /codon_start=1 /transl_table=11 /product="phospholipid-binding protein" /protein_id="YP_004391666.1" /db_xref="GI:330828714" /db_xref="GeneID:10486931" /translation="MKLLKQSALLPLLCLTAMPAFAMTLKSTDIHEGQLMDKQFSFNG FGCSGDNHSPQLSWQDLPAGTKSVAITAYDPDAPTGSGWWHWLVVNLPATQSELASNA SGKLKQGLEIRTDFGSQGYGGPCPPAGHGMHRYQFTAWALPHDLEVKADTPPAMVGYM LNSMALGKATLTATFVTP" misc_feature complement(1118888..1119343) /locus_tag="B565_1014" /note="PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea; Region: PEBP_bact_arch; cd00865" /db_xref="CDD:176643" misc_feature complement(order(1119008..1119010,1119014..1119016, 1119020..1119022,1119032..1119046,1119158..1119160, 1119164..1119166,1119188..1119193)) /locus_tag="B565_1014" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:176643" gene complement(1119609..1120865) /locus_tag="B565_1015" /db_xref="GeneID:10486932" CDS complement(1119609..1120865) /locus_tag="B565_1015" /codon_start=1 /transl_table=11 /product="adenylosuccinate synthetase" /protein_id="YP_004391667.1" /db_xref="GI:330828715" /db_xref="GeneID:10486932" /translation="MSSIVVVGANWGDEGKGRIVDYLAGQAGASIRFQGGNNAGHTVV NDLGTFKLHQVPSGVFNPDCLVVLGPGMVISPEKLTVELDEVKASGVTPKLAISDRAT LCLPLHALEDTLEEQRLGDGAYGSTRQGIAPAYGDRVMKKAILVGWLKQPDVLVERIQ FMLDWKLPQMKAIYPSFEFTQTAQEMADWLLEVSAPWIDAVCNVSMPLKALQAEGKTL LFEAQLGAGRDLIYGEYPWVTSSHVSGAYAGIGGGLPGLRPERVIAVAKAFSSSVGTG TLLTAMENQDEFRKITNEFGATTGRPRDVGYFDAVATKNGVELQAATEVALTKLDCLT GLPDLKICVAYEGAHTENPIWPQTAALKPVYEQMESWSEDITGCRTFEELPRAAQQYV LRIEELLGVPVPMVSVGPGRDEMILR" misc_feature complement(1119612..1120865) /locus_tag="B565_1015" /note="adenylosuccinate synthetase; Provisional; Region: PRK01117" /db_xref="CDD:179227" misc_feature complement(1119669..1120859) /locus_tag="B565_1015" /note="Adenylosuccinate synthetase (AdSS) catalyzes the first step in the de novo biosynthesis of AMP. IMP and L-aspartate are conjugated in a two-step reaction accompanied by the hydrolysis of GTP to GDP in the presence of Mg2+. In the first step, the r-...; Region: AdSS; cd03108" /db_xref="CDD:73337" misc_feature complement(order(1119873..1119875,1119879..1119881, 1120734..1120736,1120740..1120748,1120815..1120823, 1120827..1120829)) /locus_tag="B565_1015" /note="GDP-binding site [chemical binding]; other site" /db_xref="CDD:73337" misc_feature complement(order(1120743..1120745,1120812..1120814, 1120821..1120823)) /locus_tag="B565_1015" /note="ACT binding site; other site" /db_xref="CDD:73337" misc_feature complement(order(1120149..1120151,1120194..1120196, 1120485..1120487,1120494..1120496,1120752..1120754)) /locus_tag="B565_1015" /note="IMP binding site; other site" /db_xref="CDD:73337" gene 1121036..1121950 /locus_tag="B565_1016" /db_xref="GeneID:10486933" CDS 1121036..1121950 /locus_tag="B565_1016" /codon_start=1 /transl_table=11 /product="LysR family HTH-type transcriptional regulator" /protein_id="YP_004391668.1" /db_xref="GI:330828716" /db_xref="GeneID:10486933" /translation="MLDIHWLQTFVTLARLQHFGQTATELHMTQPNVSLHIKRLEQAT RVRLIERSPFRLTQAGERLLQSAERTIAELQLCQSDLNALNQLSQGTLAIAASDIISR LLLIQPFQRFKREFPGIDLTLFNTTSDQAAELVKAGKADLGFVMAQKRSEPLFYTELQ QVTWCALGHGLARWQARAVAGESDPLDEPTLILLGHDTRTRALIDPSLPLLALPPCRI MEVGSVDAQLDWAEAGFGVAIVPDFSLHPRLNLTAPVTSLGDFPGTSLGYVVRQNQVL SRAIKQLLHWVEEEIQKPNPYLTRVMEP" misc_feature 1121039..1121923 /locus_tag="B565_1016" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature 1121045..1121218 /locus_tag="B565_1016" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 1121306..1121896 /locus_tag="B565_1016" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cd05466" /db_xref="CDD:176102" misc_feature order(1121351..1121356,1121360..1121365,1121372..1121374, 1121384..1121386,1121390..1121410,1121687..1121704, 1121720..1121725,1121729..1121734) /locus_tag="B565_1016" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene complement(1122073..1123482) /locus_tag="B565_1017" /db_xref="GeneID:10486934" CDS complement(1122073..1123482) /locus_tag="B565_1017" /codon_start=1 /transl_table=11 /product="Immunogenic protein" /protein_id="YP_004391669.1" /db_xref="GI:330828717" /db_xref="GeneID:10486934" /translation="MHHLLLPLCALSALLPFGSQALTIGTGPLNGVYYPTGGAICRVL NAGHALHGDSCSVQSTRGSMANLKALDEGDVQLALVQSDVLHHALHGTGPFSGQGANH ELRSLFRLYQESLTLLAAPNSGITTLADIEGKRVYPGNKGAGEQITSQALMAAMGWQP GQFAAYQLKSDSEPLEGLCDGSLDAAFVVAGHPSLAVGDLISRCKVRLIPIEGEQIDR LLKQHPYYQRSRIAANLYPGQTTAINNIGMSAELVALASLPDPIVRTVRDTLLARVKQ FSRLHPALSKVTPEQLQAQTELPLHAGMSDQPPAPLSLTPEQLTAEQLTPEPLTPAPS TSEAVPTTEQVSAADGTTAPLEAPSDATATSSAAVATEATEVNPLPEEALEVTPELTA TPTTEEERVAPSAAASTVPSPSAAVSTQLPQSASAATAPQEQATQPASSAVTGETLQQ DKTDTPPAPATSAATPPQH" misc_feature complement(1122574..1123419) /locus_tag="B565_1017" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(1123579..1124721) /locus_tag="B565_1018" /db_xref="GeneID:10486935" CDS complement(1123579..1124721) /locus_tag="B565_1018" /codon_start=1 /transl_table=11 /product="putative aminotransferase B" /protein_id="YP_004391670.1" /db_xref="GI:330828718" /db_xref="GeneID:10486935" /translation="MFDFDQEVDRSGTMSLKWDKYKGQDVLPMWVADTDFVSPPSVIE ALTKRVAHGIFGYSRPSPRLIELIIERMATRYGWAIEPEWLVFLPGVVPGLNLACKAW SQHGRGIITPKPVYYPFLQAPGFNDRPLLTVPMIEEAGRWVLDLAELERQAPAADLLL LCNPHNPGGTIFTRDELLAIDAIAARHNLVICSDEIHCDLLLDKNARHIPYGAISAQA AERCAVMMAPSKTFNIAGLCCSFAIIPNARLRFRLQQAMRGISADVNLLGFVAAEAAY EGGEQWLTEQLDYLAANLALIQQAVARWPGVKLANHQATYLAWIDVSALGLADPIAFF EQAGVGLSPGAQFGDGQFVRLNFGCTRARLTDALARMERAILNNKP" misc_feature complement(1123597..1124658) /locus_tag="B565_1018" /note="aspartate aminotransferase; Provisional; Region: PRK08361" /db_xref="CDD:169403" misc_feature complement(1123603..1124643) /locus_tag="B565_1018" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature complement(order(1124008..1124010,1124032..1124037, 1124041..1124043,1124131..1124133,1124224..1124226, 1124374..1124376,1124446..1124454)) /locus_tag="B565_1018" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(1123909..1123911,1123918..1123920, 1124008..1124016,1124152..1124154,1124344..1124346, 1124443..1124445)) /locus_tag="B565_1018" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(1124032..1124034) /locus_tag="B565_1018" /note="catalytic residue [active]" /db_xref="CDD:99734" gene 1124903..1126075 /locus_tag="B565_1019" /db_xref="GeneID:10486936" CDS 1124903..1126075 /locus_tag="B565_1019" /codon_start=1 /transl_table=11 /product="sugar efflux transporter" /protein_id="YP_004391671.1" /db_xref="GI:330828719" /db_xref="GeneID:10486936" /translation="MSLSIAAVKRPDPVSLSFLAVTFMTGVAVALQVPTLSLFLAEEV QVRPFLVGLFYTINAVVGILVSQWLGHRSDNKGDRKRLILRCCFAGVALSLLFAWNRN YWLLASLGVMLAALAATASPQLFALAREYSDSRNRRADMFSSVMRAQFSLAWVIGPPI AFALAIGYGFELMYLASALAYLLCALVVWRWLPSLPLPKMAEETERVSSWRDPAVRAL FIASTLMWTCNSMYLINMPLYITRELGMDEKLAGILMGTAAALEIPFMLLAGYYTARF GKRPMMLLAVLAGAAFYTGLVTLTDQYALIALQLFNAIFIGIVAGIGMSYFQDLMPGR AGVATTLFANSIRTGSIMAGAIAGVVAEVWSFHGVFMVALGLALVALAASWRVPNV" misc_feature 1124912..1126072 /locus_tag="B565_1019" /note="sugar efflux transporter B; Provisional; Region: PRK15011" /db_xref="CDD:184973" misc_feature 1124948..1126015 /locus_tag="B565_1019" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature order(1124987..1124989,1124996..1125004,1125008..1125013, 1125065..1125067,1125074..1125079,1125086..1125088, 1125098..1125103,1125107..1125112,1125251..1125256, 1125263..1125268,1125275..1125280,1125287..1125289, 1125329..1125334,1125341..1125346,1125362..1125364, 1125578..1125580,1125587..1125592,1125599..1125604, 1125611..1125613,1125653..1125655,1125665..1125667, 1125677..1125679,1125686..1125688,1125698..1125700, 1125839..1125841,1125848..1125853,1125860..1125862, 1125872..1125877,1125884..1125886,1125914..1125919, 1125926..1125931,1125938..1125943,1125950..1125952) /locus_tag="B565_1019" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene complement(1126091..1127005) /locus_tag="B565_1020" /db_xref="GeneID:10486937" CDS complement(1126091..1127005) /locus_tag="B565_1020" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004391672.1" /db_xref="GI:330828720" /db_xref="GeneID:10486937" /translation="MFRPKSTFEQWRIFQAVVDCGGYAQAAEALNKSQSSLNHAVAKL QQSLGVPLLEVRGRKAVLTPAGEIFLKRARQLSQQVEELENLANNLERQWEPQINLYV SALQPRDRLYRALASFYPRSRGCRVNLHERIHCHFNALQPGDLMLSEHLPGDRTGLLL DEVCLLPLCAASHPLAQEEGPIRSDVLTSHNQISLHPPIHRSVDWNDADDTGWKATHY HEVLAMLRLGLGYAWLPRHLVERELAEGSLIQLDLESGNERHLYTYLLTLSPESLGPA TELLLRCLRNEYQGESSQLPHAQPRHDK" misc_feature complement(1126124..1126987) /locus_tag="B565_1020" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature complement(1126805..1126984) /locus_tag="B565_1020" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(1126244..1126717) /locus_tag="B565_1020" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature complement(order(1126325..1126330,1126334..1126339, 1126355..1126369,1126373..1126375,1126613..1126633, 1126637..1126639,1126649..1126651,1126658..1126663, 1126667..1126672)) /locus_tag="B565_1020" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene complement(1127133..1127888) /locus_tag="B565_1021" /db_xref="GeneID:10486938" CDS complement(1127133..1127888) /locus_tag="B565_1021" /codon_start=1 /transl_table=11 /product="short chain dehydrogenase/reductase family oxidoreductase" /protein_id="YP_004391673.1" /db_xref="GI:330828721" /db_xref="GeneID:10486938" /translation="MLDYQAPRDLLKDKVILVTGAGDGIGREAALTYAAHGATVILLG RTSAKLEAVYDQIEAAGYPLPAIVPVDLKGATAAHYRGMAETFAQQFGRLDGVLFNAG LLGTLSPFEHIQEKEWDEVMQVNVKSEFLLTQALLPLLRQTAKAQGDASIIYTSSSVG RKGRAYWGTYAISKFAIEGMMEVLADELENTGVRVNTLNPGGTRTKMRASAFPAEDPM NLKTPADLMPLYLYLMGSDSRGKTGQTFVAQPK" misc_feature complement(1127142..1127861) /locus_tag="B565_1021" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(1127154..1127861) /locus_tag="B565_1021" /note="3-ketoacyl-(acyl-carrier-protein) reductase; Validated; Region: fabG; PRK05653" /db_xref="CDD:180183" misc_feature complement(order(1127280..1127291,1127367..1127369, 1127379..1127381,1127418..1127426,1127583..1127591, 1127751..1127759,1127814..1127816,1127820..1127825, 1127829..1127831)) /locus_tag="B565_1021" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature complement(order(1127367..1127369,1127379..1127381, 1127418..1127420,1127514..1127516)) /locus_tag="B565_1021" /note="active site" /db_xref="CDD:187535" gene 1128111..1129118 /locus_tag="B565_1022" /db_xref="GeneID:10486939" CDS 1128111..1129118 /locus_tag="B565_1022" /codon_start=1 /transl_table=11 /product="putative protease sohB" /protein_id="YP_004391674.1" /db_xref="GI:330828722" /db_xref="GeneID:10486939" /translation="MTFLTEYGLFLAKTVTFLLAIGAIILMIVSTRQPKARKGELVVT DLSSELEQGQFALKSALASKAERKVMEKQQKEEQKKRAKAGDERSRLFVLDFNGSMDA KEVASLREEVSAVIGVAQPGDEVLLRLESGGGVVHGYGLAASQLQRLRDRDIKLTVAI DKVAASGGYMMACVADKILAAPFAIVGSIGVIAQLPNFNKLLKKHDIEFEMHTAGQYK RTITMFGENDDLGREKFREELAAIHERFKAFVAEHRPQLDIDQVTTGEHWLASQAKGL GLVDTLCTSDDYLLAQASHHKVIGISYRKPKSLTQKLGQQGAQALEAGLGRLWQQSPW R" misc_feature 1128111..1128548 /locus_tag="B565_1022" /note="Peptidase family S49 N-terminal; Region: Peptidase_S49_N; pfam08496" /db_xref="CDD:149519" misc_feature 1128117..1129097 /locus_tag="B565_1022" /note="putative inner membrane peptidase; Provisional; Region: PRK11778" /db_xref="CDD:183309" misc_feature 1128378..1128977 /locus_tag="B565_1022" /note="Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad; Region: S49_Sppa_N_C; cd07023" /db_xref="CDD:132934" misc_feature order(1128399..1128401,1128492..1128494,1128606..1128608, 1128651..1128653,1128657..1128659,1128681..1128692, 1128837..1128839,1128903..1128911,1128915..1128917, 1128924..1128926) /locus_tag="B565_1022" /note="tandem repeat interface [polypeptide binding]; other site" /db_xref="CDD:132934" misc_feature order(1128435..1128437,1128456..1128458,1128528..1128530, 1128726..1128728,1128732..1128746,1128831..1128833, 1128843..1128845) /locus_tag="B565_1022" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:132934" misc_feature 1128606..1128608 /locus_tag="B565_1022" /note="active site residues [active]" /db_xref="CDD:132934" gene 1129299..1130522 /locus_tag="B565_1023" /db_xref="GeneID:10486940" CDS 1129299..1130522 /locus_tag="B565_1023" /codon_start=1 /transl_table=11 /product="major facilitator family transporter" /protein_id="YP_004391675.1" /db_xref="GI:330828723" /db_xref="GeneID:10486940" /translation="MSWSTFRQFTPLVWIVILGTFMVRTSYYMVWPFLSILLYREYDL SATFIGLLLGGSMALSTLVSFYGGWLSDRFGRRSILLAGCLVAMICFGLLGFSHEVFW LGVGVMGSGLSSGLIDAPGKALMADSLASAKARELALHLRYFLLNLGAALGPLLGVTL GINAQQETFLFLVVSYLLLALAFGWGFRRAGNTGKPGAAGPGLRDAIKVLLADRAFLL LVMANLLMVLVYSQFHSPLVQYLTRAGMPQVAELVALLVATNALTVVLLQFPLLRLLS RWPVRVRLHIGMALFLAAQLLFALGDPMVRSHWFGAVLLLSIGETILFPLLNVLIDQM APAHLKGSYFGASALAGLGGAAGALLGGWILEQWSGQLLYVLMALLCVAIFALYEAGA RHHGRRSARQESVIG" misc_feature 1129335..>1129604 /locus_tag="B565_1023" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" gene complement(1130559..1130912) /locus_tag="B565_1024" /db_xref="GeneID:10486941" CDS complement(1130559..1130912) /locus_tag="B565_1024" /codon_start=1 /transl_table=11 /product="DsrE/DsrF-like family" /protein_id="YP_004391676.1" /db_xref="GI:330828724" /db_xref="GeneID:10486941" /translation="MNQQIVVIANGAPYGSESLFNALRLAIALNEQRGASLKLFLMSD AVSAALAGQAPAEGYNLRQMLEILLAQGVTIRLCKTCTDARGITALPLIEGIEVGTLP MLAQWTLAADKVLTF" misc_feature complement(1130562..1130906) /locus_tag="B565_1024" /note="DsrE/DsrF-like family; Region: DrsE; cl00672" /db_xref="CDD:186138" gene 1131071..1131463 /locus_tag="B565_1025" /db_xref="GeneID:10486942" CDS 1131071..1131463 /locus_tag="B565_1025" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391677.1" /db_xref="GI:330828725" /db_xref="GeneID:10486942" /translation="MWKVLGAGLLLLAGQAFGSEAVGCKARLQAVNDQLVFAKAHNNA GQIAGLEQAARNIKVNCTDEGLLKEQKERVNKLRGEVDERLLELQEARVSGKPEKIAK RQARLEESQTRMLEAQRELDKLIRLVGK" misc_feature 1131119..1131421 /locus_tag="B565_1025" /note="Protein of unknown function (DUF1090); Region: DUF1090; pfam06476" /db_xref="CDD:191535" gene complement(1131521..1131769) /locus_tag="B565_1026" /db_xref="GeneID:10486943" CDS complement(1131521..1131769) /locus_tag="B565_1026" /codon_start=1 /transl_table=11 /product="ferredoxin-like protein yfhL" /protein_id="YP_004391678.1" /db_xref="GI:330828726" /db_xref="GeneID:10486943" /translation="MALLITDKCINCDMCDPECPNQAISLGEEIYEIDPSRCTECVGH YEKPTCISVCPIDCIIWDPAHVETEDQLMEKFVRMHRP" misc_feature complement(1131590..>1131745) /locus_tag="B565_1026" /note="ferredoxin; Validated; Region: PRK07118" /db_xref="CDD:180852" gene complement(1131771..1133132) /locus_tag="B565_1027" /db_xref="GeneID:10486944" CDS complement(1131771..1133132) /locus_tag="B565_1027" /codon_start=1 /transl_table=11 /product="protease YegQ" /protein_id="YP_004391679.1" /db_xref="GI:330828727" /db_xref="GeneID:10486944" /translation="MFKPELLSPAGSLKNMRYAYAYGADAVYAGQPRYSLRVRNNEFD HENLQLGINEAHALGKQFYVVANIQPHNSKLKTFIRDMRPVVEMKPDALIMSDPGLIM MMREAFPDMPIHLSVQANAVNWATVKFWHQMGLTRAILSRELSLDEIEEIRMQVPEME LEVFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNSCRWEYKVHEGKEDDVGQIVHRQ EPIKVRPDNTLGLGKPTDALVLLEESNRPGEYMSAFEDEHGTYIMNSKDLRAVEHVER LTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAVAGRPFDRSLMGTLENLAHRGYT EGFLRRHNHSEYQNYDYGYSVSDTQQFVGEITGRKGDMVEVEVKNKFLVGNNLELMTP QGNVRFNLEQMENRKGELIDTAPGNGHVVYVPVPKDLDVNYGILLRNLGDSQDTRNPH TAA" misc_feature complement(1131813..1133132) /locus_tag="B565_1027" /note="putative protease; Provisional; Region: PRK15452" /db_xref="CDD:185349" misc_feature complement(1132104..1132910) /locus_tag="B565_1027" /note="Peptidase family U32; Region: Peptidase_U32; cl03113" /db_xref="CDD:194534" gene complement(1133390..1134127) /locus_tag="B565_1028" /db_xref="GeneID:10486945" CDS complement(1133390..1134127) /locus_tag="B565_1028" /codon_start=1 /transl_table=11 /product="EAL domain" /protein_id="YP_004391680.1" /db_xref="GI:330828728" /db_xref="GeneID:10486945" /translation="MFAFKEEFPVGDVASLTTADIAVPFYQPIVDRDRQIIGFEALAR RWEPRQQRYQGIDFPSLSDDESLHVDIVMLRAIWRDLTVLARHAPCTLSINLNPAFES PTYKNLLLLTLLQARKLDIAIWFEVVEYAPLERKELALIEVLRSHGAHIACDDFGTQE CNFQRVMALPYEVIKLDRSLLLQATRSSHALRMLTGLVEYLQRLGMKVVCEGVENQTH IEIADQLGCHYQQGYVYAMPAPLSRWA" misc_feature complement(1133399..1134061) /locus_tag="B565_1028" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:30163" gene 1134404..1135108 /locus_tag="B565_1029" /db_xref="GeneID:10486946" CDS 1134404..1135108 /locus_tag="B565_1029" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391681.1" /db_xref="GI:330828729" /db_xref="GeneID:10486946" /translation="MNKIFTVLLLIFSSNVLASPDISVGTLYDYMSAEKTTLLKRVRN LGDETAFVKITLAEIIYGADGVPKEQELPEEGVRQLVTSPSRLIIPAGGMQATRFIYM GVRERERYFRVRFVPVKPQGDEITELPPQQKISAGVSIMTGFGTILFVAPKETRHDTR IDRKNGVLYVENRGNATVILDYLELCDQKESSCSQPEKMHLLPGVKKRVSQEATRLVR FELIEGKKSVFKEFKL" misc_feature 1134440..>1134982 /locus_tag="B565_1029" /note="putative fimbrial protein TcfA; Provisional; Region: PRK15308" /db_xref="CDD:185208" gene 1135155..1135652 /locus_tag="B565_1030" /db_xref="GeneID:10486947" CDS 1135155..1135652 /locus_tag="B565_1030" /codon_start=1 /transl_table=11 /product="Adhesin major subunit pilin" /protein_id="YP_004391682.1" /db_xref="GI:330828730" /db_xref="GeneID:10486947" /translation="MKMLSLFPALLLASGSLMAAERIEHTVTVTAQIPTENFYVQPVG DWMNTPQKLAFNSFNNKLEPLAKQLDMKSTIGPIKGYLLYPSTIISGKESIGVTVKVA GVELTTSSKDLLNQADANTGKKVGFEIIPAAAPAGGYKPGNYQGIVSMMFESEVPSAP TAQGS" gene 1135718..1138126 /locus_tag="B565_1031" /db_xref="GeneID:10486948" CDS 1135718..1138126 /locus_tag="B565_1031" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391683.1" /db_xref="GI:330828731" /db_xref="GeneID:10486948" /translation="MVRSLLLLLGLLLSVPLVAADPALLLQQARQLPEGFEAHFFGVP LMVRVTVDGRLLGDGEVLLGRDNSVQLLSLVDVQESEFDEEARERWLTRLGSHLPLGE CGRTCPEGIVGLQYSLEESQLSVLTGEVEQEARDQRFMALPQESKGLLVQNQLNLVQG TQRNGHYNLQLEGSWGQWTPFMEGDATWQGGGPTDLGMAQVYGERLHEANFYRLGFFF PSAQGLVRQPNYYSGATPTVLGVMWGSSDLLRRERGVPSLAPIQVAPARPGMVEIYRD GNLIQSQPVVSGLQALDTRSLPGGIYEVELRLLEDGQESRRWREMIYKPSNWQTPEEP WRFNLFVGRQTRWLVRQGDSDLEGASGGIAVNHLLLPSLVAGAGSQYVDKRAQHSLSL DWEATSQLHGFASLNQSVGMGWGYDLQGIYWHGNSSLVASHSRNLRKQGDASSVSSLS LQQSLEKWGSLGLYVSHQSGRGNGADVGWHYSDRLWGRWVTWGVTLFDRPGSESTAQQ RDRGSTLSLTVNLGGQDRQLSLGLGSNTSRSGGAQRSAYLNYQQEVDWGPLRQVSVGS THDSYGTGLSGYGRFASPWLGGDLFAQHSSYNAEMTGGINLESVVALGREGELAIGSR DMGGMGNEAAMILDIDADDEAAQIRVSDDQGGLQTLGPGRHLVSAPALQSGALQLEMA DHEGTPLTIKPSVLPYHLNRGGVGYGQVNAVSTVTVIGRLLDEQNQPLRGAMVSNPIG RAFTENDGFFALEASRRQPGFSVEHNGSLHCNSSAIEQSRMDESDIIMLGELRCSSSI TVKK" misc_feature <1136495..1138108 /locus_tag="B565_1031" /note="fimbrial outer membrane usher protein TcfC; Provisional; Region: PRK15310" /db_xref="CDD:185210" gene 1138096..1138533 /locus_tag="B565_1032" /db_xref="GeneID:10486949" CDS 1138096..1138533 /locus_tag="B565_1032" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391684.1" /db_xref="GI:330828732" /db_xref="GeneID:10486949" /translation="MFIQYYRKKIISILFFIIVVMISDSVYAETFNITAEYIPSSYGP QGSYFINKTPCRMEQPYGFDFCDPEKPLESATIIQFSVDVFRSVSSKKSKSNYLSYYQ TSGPKKIIVTNDKDGTVYELKMIPTHIGVETEKWIFQVIILDQ" gene 1138500..1139312 /locus_tag="B565_1033" /db_xref="GeneID:10486950" CDS 1138500..1139312 /locus_tag="B565_1033" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391685.1" /db_xref="GI:330828733" /db_xref="GeneID:10486950" /translation="MDLSGDHPRPMSRINGDCIFLTERAWGTPAFSELLLHSIKSSAQ GRAAECYFNSPADDNGYYWIDRIIYGFRLESPDPLKMSNGNYSGRFNFSIGRNQDIDL GDGAYNGQLAHEVNIKLAVRHQLRVDFPKGEGEGRSKVTLLPPGGWSDRIHNGKGIPN KLQQELPFRLWSSAPFTVTLRCQYISGTECALKNAKGHQAKLNTYYINVENEMFHLST TPYKFSSLRGPTINGARKIKFWVAGDVVTEMMKYPGSTYKGDITLIFDAAID" gene complement(1139309..1139947) /locus_tag="B565_1034" /db_xref="GeneID:10486951" CDS complement(1139309..1139947) /locus_tag="B565_1034" /codon_start=1 /transl_table=11 /product="two component LuxR family transcriptional regulator" /protein_id="YP_004391686.1" /db_xref="GI:330828734" /db_xref="GeneID:10486951" /translation="MSFKIILADDHPLILTGIRSLIEQITPHCEVVAEAYQVSDLLKL LQQHRCDLLITDFSMPGDTRSDGIVMIQQLRRDYPNLPIIVLTQIHNAGILQSLIQLG VSGILLKKAVISELSDAIRQILSGHSYIGSSAKNLLAEAGLGHHTSLIQLTPKESEVV RLLASGMSVTQVAEYLHRSIKTISTQKKSAMLRLGLQSDSALFDYAKSSGLC" misc_feature complement(1139324..1139944) /locus_tag="B565_1034" /note="transcriptional regulator RcsB; Provisional; Region: PRK10840" /db_xref="CDD:182771" misc_feature complement(1139576..1139932) /locus_tag="B565_1034" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(1139618..1139623,1139630..1139632, 1139687..1139689,1139747..1139749,1139780..1139782, 1139918..1139923)) /locus_tag="B565_1034" /note="active site" /db_xref="CDD:29071" misc_feature complement(1139780..1139782) /locus_tag="B565_1034" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(1139747..1139755,1139768..1139773)) /locus_tag="B565_1034" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(1139615..1139623) /locus_tag="B565_1034" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(1139324..1139494) /locus_tag="B565_1034" /note="C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors...; Region: LuxR_C_like; cd06170" /db_xref="CDD:99777" misc_feature complement(order(1139351..1139353,1139384..1139398, 1139402..1139407,1139411..1139416,1139438..1139446, 1139483..1139491)) /locus_tag="B565_1034" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:99777" misc_feature complement(order(1139324..1139329,1139336..1139338, 1139345..1139353,1139444..1139446,1139450..1139452, 1139456..1139458)) /locus_tag="B565_1034" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:99777" gene 1140092..1143340 /locus_tag="B565_1035" /db_xref="GeneID:10486952" CDS 1140092..1143340 /locus_tag="B565_1035" /codon_start=1 /transl_table=11 /product="two-component system hybrid sensor histidine kinase/response regulator" /protein_id="YP_004391687.1" /db_xref="GI:330828735" /db_xref="GeneID:10486952" /translation="MEELAKKLDYRIAWQVYPDWKTMYADACRGKLDILLDAFNSEVR QCITYSLPYYTSPTVVVVRQDSPLFRDVSRLQSASIAIEKGFLTEKLVKLHYPNVTSR LFDDTRSALQAVEQGRADAYIGNLHVANLFIERHPALAVVAQSPLLMETLHLGVASQK HSLAIRLDTAIQSLTVEARSALEKRWLGESLEPNFMGHSHFLLRPDERAWLSTLPPLK LGQLPAWVPLSYRDEDGNPVGLMVDYLDVLQEKLGLAYSRMPVQSWPELQQLLLHHEV DLAVLPARIIERLVGWHASEPFASFPMVLVTARGSIPIGDLSDLTGKKLLLTDSMLIP QLRAMVPDLKLIATKSASEGLTRVAAGRGDAYIGNLVVVSRLITEQFDDRLHIAAPTP FKDELAVAVREPYVPLLPLVNRVLASMSDKEKRQIRNSWLALNYSEGIPRAKLVRTLL PAGVAITLFILVLSVAYWRLRQEIVRRHQVEAALARAKAKAESAATQKGEFLATMSHE IRTPMNSIIGMAEQLTFTELTQDQRQMVEVINRGAQGLHALIDNVLDFAKLEAGKMQL EQAPFLVRELLDSVLIMTVSEVHRKGLRIYLWVDAGVAARVSGDALRLRQILFNFVSN AIKFTERGFIEISVQLLVQGEGQQQLRFGVRDSGIGMSTEALGRIFNAFEQAESSTTR SYGGTGLGLSICQTLATLMGGEIRLESAPGLGTFISLTVTLPMLVQREPDLRLNGVQA HIDLHEEKLCHTLLLHLDALGVTRTSESGDAHLRFTDHELAGNGVIRVLPLATPLGYR CDEEGYILNSNPMTWHAVREVCYRQFGLSAGTATKAMRKSAPMQPCRVLLVEDNPLNQ SLVIRQLRQLGMNCDVAEHGQQALEMVAQHPYELVLCDCQMPVMDGYEFTRRIRAAEK GERQLIIAMTANVLPEQAERCFAVGMDDLLGKPVLLDVLRQMLQKWRILTAPTLIDIA AMEAFFGHGDKLRQMFPLFRQDLELSMAQAPLDDNALASWVHRQAGTISMMMAPELAE QAWRLEEKIRQFGSPACTDELTRFRAQLQQIIDELTLLSEREGHSVIQGELE" misc_feature 1140092..1140652 /locus_tag="B565_1035" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature order(1140149..1140151,1140218..1140220,1140350..1140352, 1140464..1140466) /locus_tag="B565_1035" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(1140413..1140415,1140425..1140427,1140443..1140445) /locus_tag="B565_1035" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 1140539..1140556 /locus_tag="B565_1035" /note="hinge residues; other site" /db_xref="CDD:29040" misc_feature 1140740..1141387 /locus_tag="B565_1035" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature 1140740..1141387 /locus_tag="B565_1035" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature order(1140764..1140766,1140881..1140883,1140953..1140955, 1141082..1141084,1141196..1141198) /locus_tag="B565_1035" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(1141145..1141147,1141157..1141159,1141175..1141177) /locus_tag="B565_1035" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 1141268..1141285 /locus_tag="B565_1035" /note="hinge residues; other site" /db_xref="CDD:29040" misc_feature 1141580..1141765 /locus_tag="B565_1035" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature order(1141592..1141594,1141604..1141606,1141616..1141618, 1141625..1141627,1141637..1141639,1141646..1141648, 1141694..1141696,1141706..1141708,1141715..1141717, 1141727..1141729,1141736..1141738,1141748..1141750) /locus_tag="B565_1035" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature 1141610..1141612 /locus_tag="B565_1035" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature 1141931..1142254 /locus_tag="B565_1035" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(1141949..1141951,1141961..1141963,1141970..1141972, 1142051..1142053,1142057..1142059,1142063..1142065, 1142069..1142074,1142153..1142164,1142210..1142212, 1142216..1142218,1142231..1142236,1142240..1142242) /locus_tag="B565_1035" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 1141961..1141963 /locus_tag="B565_1035" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(1142063..1142065,1142069..1142071,1142153..1142155, 1142159..1142161) /locus_tag="B565_1035" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature 1142627..1142965 /locus_tag="B565_1035" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature 1142630..1142971 /locus_tag="B565_1035" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(1142639..1142644,1142771..1142773,1142795..1142797, 1142861..1142863,1142918..1142920,1142927..1142932) /locus_tag="B565_1035" /note="active site" /db_xref="CDD:29071" misc_feature 1142771..1142773 /locus_tag="B565_1035" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(1142780..1142785,1142789..1142797) /locus_tag="B565_1035" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 1142927..1142935 /locus_tag="B565_1035" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" gene complement(1143314..1143604) /locus_tag="B565_1036" /db_xref="GeneID:10486953" CDS complement(1143314..1143604) /locus_tag="B565_1036" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391688.1" /db_xref="GI:330828736" /db_xref="GeneID:10486953" /translation="MFEVWDEHGHATGLTLQALKVRISNDYQGDLMVRYSNKLGLPTT LFLTIHQGVAYQRFKAGSPKLDWEWLASAGNGHSPRNFMSEQFPLLQLSLDN" gene complement(1143747..1143831) /locus_tag="B565_t034" /db_xref="GeneID:10486954" tRNA complement(1143747..1143831) /locus_tag="B565_t034" /product="tRNA-Tyr" /db_xref="GeneID:10486954" gene complement(1143876..1143960) /locus_tag="B565_t035" /db_xref="GeneID:10490019" tRNA complement(1143876..1143960) /locus_tag="B565_t035" /product="tRNA-Tyr" /db_xref="GeneID:10490019" gene complement(1144000..1144084) /locus_tag="B565_t036" /db_xref="GeneID:10490020" tRNA complement(1144000..1144084) /locus_tag="B565_t036" /product="tRNA-Tyr" /db_xref="GeneID:10490020" gene complement(1144326..1145663) /locus_tag="B565_1037" /db_xref="GeneID:10490021" CDS complement(1144326..1145663) /locus_tag="B565_1037" /codon_start=1 /transl_table=11 /product="succinylarginine dihydrolase" /protein_id="YP_004391689.1" /db_xref="GI:330828737" /db_xref="GeneID:10490021" /translation="MKHFEVNFDGLVGPTHNYAGLSYGNVASQSNAQEASNPKEAAKQ GLRKMKALTELGMTQGVLAPQERPDLATLRRLGFTGNDARVLEQAAKQAPAILAACYS ASSMWTANAATVSPSADTQDGRIHFTPANLTNKFHRSLEPDVTGRILRAVFNNDRHFS HHLHLPENDHFGDEGAANHTRLCRAYGEAGVELFVYGRSAFDYSRPAPKRYPARQTLE ASQAIARLHGLGEESVVFIQQNPEVIDQGVFHNDVIAVGNQNVLFFHQQAFLNTEAVL TEIRGKFGEGNLHFIEVPTAEVSVLDAVKSYLFNTQILTMPSGEMAIIAPTECRDNPA VSAYLGKLLTQETPIKAVHYMDVKQSMRNGGGPACLRLRVAMNDQELAAVNPACLIND SQFARLDGWVDRHYRDRLTLDDLRDPALVQESRSALDELTQILKLGSVYPFQR" misc_feature complement(1144329..1145663) /locus_tag="B565_1037" /note="Succinylarginine dihydrolase; Region: AstB; cl01511" /db_xref="CDD:186443" gene 1146019..1148640 /locus_tag="B565_1038" /db_xref="GeneID:10486955" CDS 1146019..1148640 /locus_tag="B565_1038" /codon_start=1 /transl_table=11 /product="DNA topoisomerase I" /protein_id="YP_004391690.1" /db_xref="GI:330828738" /db_xref="GeneID:10486955" /translation="MGKSLVIVESPAKAKTINKYLGKDYVVKSSVGHVRDLPTSGSAS TEPKKPVIRGIKLSESEKAAKDRKALFARMGINPTAGWQANYQILPGKEKVVSELQSL AEKADTIYLATDLDREGEAIAWHLREIIGGDDSRYKRVVFNEITKSAIKEAFAQPSEL NIDRVNAQQARRFLDRVVGYMVSPLLWKKLARGLSAGRVQSVAVRLIVDKEREIKAFV PVEFWDLNADLLTGDKSDLRMEVVSRNGADFKPVTQAETFAAVAALEGVDYKVVNRED KPTGSKPSAPFITSTLQQAASTRLSFGVKKTMMMAQRLYEAGYITYMRTDSTNLSKEA VEAVREYIGEQYGAAYLPAEPNLYGAKANAQEAHEAIRPSNVQVTAEMLEGMEPDAMR LYDLIWRQFVACQMTPAQYDSSTLTVKAGEFELKARGRTLRFAGWTKALPPMGRKGED SQLPAVTVGEVLKLIKLDPRQHFTKPPARFTEAALVRELEKRGIGRPSTYASIISTIV DRGYVRVESRRFFAEKMGEIVTDRLVENFVELMNYEFTAKMEDKLDGIADGSLEWKKV LDAFYAEFTQELEKADKAPEEGGMRANQMVMTDIDCPDCGRKMGIRTATTGVFLGCSG YALPPKERCKKTINLVSADEFVSATDGEEAETEALRAKHRCGVCGTAMDAYIIDDSRK LHVCGRNPDCDGYEIEKGQFKLKGYEGPSIECDRCGAEMQLKNGRFGKYMGCTNETCK NTRKILKNGDIAPPKEDPVPLPELKCTQSDAHFVLRDGAAGLFLAASNFPKSRETRAP LVEELKRFKDRISAKHKYLAGAPLTDPDGNPAIVRFSRKTKEQYVMSEVNGKATGWTA HYDNGTWQESLPKAKKA" misc_feature 1146022..1148574 /locus_tag="B565_1038" /note="DNA topoisomerase I subunit omega; Validated; Region: PRK07561" /db_xref="CDD:181030" misc_feature 1146025..1146489 /locus_tag="B565_1038" /note="TOPRIM_TopoIA_TopoI: The topoisomerase-primase (TORPIM) domain found in members of the type IA family of DNA topoisomerases (Topo IA) similar to Escherichia coli DNA topoisomerase I. Type IA DNA topoisomerases remove (relax) negative supercoils in...; Region: TOPRIM_TopoIA_TopoI; cd03363" /db_xref="CDD:173783" misc_feature order(1146043..1146048,1146055..1146057,1146358..1146360, 1146364..1146366,1146370..1146372) /locus_tag="B565_1038" /note="active site" /db_xref="CDD:173783" misc_feature order(1146064..1146066,1146361..1146363,1146367..1146369, 1146388..1146393,1146397..1146402) /locus_tag="B565_1038" /note="interdomain interaction site; other site" /db_xref="CDD:173783" misc_feature order(1146358..1146360,1146364..1146366) /locus_tag="B565_1038" /note="putative metal-binding site [ion binding]; other site" /db_xref="CDD:173783" misc_feature 1146367..1146369 /locus_tag="B565_1038" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:173783" misc_feature 1146502..1147746 /locus_tag="B565_1038" /note="DNA Topoisomerase, subtype IA; DNA-binding, ATP-binding and catalytic domain of bacterial DNA topoisomerases I and III, and eukaryotic DNA topoisomerase III and eubacterial and archael reverse gyrases. Topoisomerases clevage single or double stranded...; Region: TOP1Ac; cd00186" /db_xref="CDD:73184" misc_feature order(1146502..1146585,1146598..1146660) /locus_tag="B565_1038" /note="domain I; other site" /db_xref="CDD:73184" misc_feature order(1146529..1146534,1146541..1146543,1146553..1146555, 1146565..1146567,1146952..1146954,1146964..1146966, 1146988..1146990,1147510..1147515,1147522..1147527, 1147531..1147533,1147543..1147548) /locus_tag="B565_1038" /note="DNA binding groove [nucleotide binding]" /db_xref="CDD:73184" misc_feature order(1146631..1146633,1146643..1146645,1147618..1147620) /locus_tag="B565_1038" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:73184" misc_feature order(1146673..1146696,1146820..1146864,1147237..1147281, 1147285..1147341,1147411..1147443) /locus_tag="B565_1038" /note="domain II; other site" /db_xref="CDD:73184" misc_feature order(1146865..1146885,1146889..1147056,1147117..1147143, 1147174..1147236) /locus_tag="B565_1038" /note="domain III; other site" /db_xref="CDD:73184" misc_feature order(1146898..1146900,1146910..1146918,1147120..1147122, 1147192..1147194,1147201..1147203,1147213..1147215, 1147504..1147506,1147510..1147512,1147576..1147578) /locus_tag="B565_1038" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:73184" misc_feature order(1146982..1146984,1146988..1146990,1147120..1147122) /locus_tag="B565_1038" /note="catalytic site [active]" /db_xref="CDD:73184" misc_feature order(1147444..1147566,1147576..1147620,1147636..1147746) /locus_tag="B565_1038" /note="domain IV; other site" /db_xref="CDD:73184" misc_feature 1147813..1147935 /locus_tag="B565_1038" /note="Topoisomerase DNA binding C4 zinc finger; Region: zf-C4_Topoisom; cl11977" /db_xref="CDD:143760" misc_feature 1148152..1148262 /locus_tag="B565_1038" /note="Topoisomerase DNA binding C4 zinc finger; Region: zf-C4_Topoisom; cl11977" /db_xref="CDD:143760" misc_feature 1148296..1148412 /locus_tag="B565_1038" /note="Topoisomerase I zinc-ribbon-like; Region: Topo_Zn_Ribbon; pfam08272" /db_xref="CDD:149367" misc_feature 1148497..1148613 /locus_tag="B565_1038" /note="Topoisomerase I zinc-ribbon-like; Region: Topo_Zn_Ribbon; pfam08272" /db_xref="CDD:149367" gene 1148749..1148913 /locus_tag="B565_1039" /db_xref="GeneID:10486956" CDS 1148749..1148913 /locus_tag="B565_1039" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391691.1" /db_xref="GI:330828739" /db_xref="GeneID:10486956" /translation="MEINEIRPGMSCMTREGAAYVLEVDRQSLLVLLQRADETIPVQV RSDEILAPLE" gene complement(1148930..1149286) /locus_tag="B565_1040" /db_xref="GeneID:10486957" CDS complement(1148930..1149286) /locus_tag="B565_1040" /codon_start=1 /transl_table=11 /product="methylated-DNA-[protein]-cysteineS- methyltransferase" /protein_id="YP_004391692.1" /db_xref="GI:330828740" /db_xref="GeneID:10486957" /translation="MSIEPSPSPLNKTARIEAIIALIPAGRVVSYGQVADLAGLPGRA RLVGKVLRETDKVLPWHRVLSAAGTISLPKGSPSFAEQTGRLQQEGVVVIGGRVRMKE WQWQPDLAELLFLLPF" misc_feature complement(1149017..1149244) /locus_tag="B565_1040" /note="The DNA repair protein O6-alkylguanine-DNA alkyltransferase (ATase; also known as AGT, AGAT and MGMT) reverses O6-alkylation DNA damage by transferring O6-alkyl adducts to an active site cysteine irreversibly, without inducing DNA strand breaks. ATases...; Region: ATase; cd06445" /db_xref="CDD:119438" misc_feature complement(order(1149020..1149022,1149098..1149100, 1149104..1149109,1149194..1149196)) /locus_tag="B565_1040" /note="active site" /db_xref="CDD:119438" misc_feature complement(order(1149065..1149067,1149092..1149094, 1149107..1149109,1149125..1149127,1149131..1149136, 1149143..1149145,1149149..1149154,1149158..1149160, 1149167..1149169,1149191..1149196)) /locus_tag="B565_1040" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:119438" gene complement(1149353..1150906) /locus_tag="B565_1041" /db_xref="GeneID:10486958" CDS complement(1149353..1150906) /locus_tag="B565_1041" /codon_start=1 /transl_table=11 /product="Aerotaxis receptor Aer" /protein_id="YP_004391693.1" /db_xref="GI:330828741" /db_xref="GeneID:10486958" /translation="MARRDVHTLDSEVEFPADVQLVSTTDLRGVITYANPAFCEIAGY QVDELVGHNHNLVRHPDMPKAAFADLWARLKEGKPWRGMVKNRCKDGRYYWVDAYVTP IYEGNRISGYQSVRCKPEPQFKRIAAQTYQALLKAERGNSSNLPSLAKVRTPAITLLL LGLMGWTFASQGAMTVLLMLLPLLLIGGAYWRELFALPHYLQRLGREYDSLTRLVYSG DNPGAIADFHIKMLQARIRTVLGRINDATAPLQTLAINLKQASHQACLDINEQDAQTQ QMATAMTQMANTAHEIARNIQDSNGQVNEARNRCEQTNQQLNQTEQQIEQLAKQAELA FNSAVELASESERIGSVMGEIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRT LSTRTHKATEQIQGSIKQIQHTLGRWKGMMQENLQQTRACAEMTRQGASSLHTVLAEI ELVTEHSTQIATAAEQQQAVVEEISRSIHQISAYSHANSQKMLDVDYSSQALLERAKQ LKGLSQTFG" misc_feature complement(1150583..1150843) /locus_tag="B565_1041" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(1150559..1150816) /locus_tag="B565_1041" /note="PAS fold; Region: PAS_3; pfam08447" /db_xref="CDD:117024" misc_feature complement(order(1150634..1150636,1150649..1150651, 1150727..1150738,1150775..1150777,1150793..1150795, 1150805..1150807)) /locus_tag="B565_1041" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(1150607..1150609,1150613..1150615, 1150697..1150702,1150709..1150711,1150733..1150735, 1150745..1150747)) /locus_tag="B565_1041" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(1149359..1149925) /locus_tag="B565_1041" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1151119..1152984) /locus_tag="B565_1042" /db_xref="GeneID:10486959" CDS complement(1151119..1152984) /locus_tag="B565_1042" /codon_start=1 /transl_table=11 /product="beta-hexosaminidase" /protein_id="YP_004391694.1" /db_xref="GI:330828742" /db_xref="GeneID:10486959" /translation="MSTPLIHTQVARRDGEDVWFTFTLSRMPDTRWKLHFCLARHIDP DSLQGGELERQSGSYKVIVPKTGSCELRFCCRQTPIKKLSDMPQGFFLSLPEATTGAQ LLPVTLAAQDLGLENPPVARPDLPDVEPLPGIVPQPAHLVLLEGNFRLAERAHVSAPH DVPKLLAHFNELTSLALEQDHDAEIRLTEAKLAPEAYQLTITPQEVVIAAADEAGWRH GLVTLAQWYLQHGESLPCVTLEDAPRFGFRGIFLDCARHFHTPATIKRLLKLMSLYKF NRFHWHLTDDEGWRLEIKAFPELTDVGAWRGHNLAIDPQLSGGAEPYGGYYTQSEVKE LVSYASELGITVIPEIDIPGHCHAAIKALPELLIETEDHSRYRSVQHFDDNVLNPALP GTYRFLEAVLDEVCELFPGPQIHMGGDEVPTGVWTDSPACQQLMVEQGYADCRELQGH LLRHCQRYLAARGKQMIGWEEILHGDKVSRKAAICAWTSFQAGLDAAAAGYPVVMAPA QFLYLDLAWSADIHEPGLYWAGTLNLEQVYACDPAPADFHANDNILGVLSPLWSELIT SRDRLDYMLFPRMLATAEVAWSDPAHKGWEHFAARLPGQLQILDQLQVRYRMPQR" misc_feature complement(1152256..>1152402) /locus_tag="B565_1042" /note="Glycosyl hydrolase family 20, domain 2; Region: Glyco_hydro_20b; pfam02838" /db_xref="CDD:111707" misc_feature complement(1151179..1152252) /locus_tag="B565_1042" /note="The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i); Region: GH20_chitobiase-like; cd06563" /db_xref="CDD:119333" misc_feature complement(order(1151296..1151298,1151302..1151304, 1151443..1151445,1151449..1151451,1151524..1151526, 1151578..1151580,1151725..1151730,1151920..1151922, 1152217..1152219)) /locus_tag="B565_1042" /note="active site" /db_xref="CDD:119333" gene complement(1152969..1153841) /locus_tag="B565_1043" /db_xref="GeneID:10486960" CDS complement(1152969..1153841) /locus_tag="B565_1043" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine kinase" /protein_id="YP_004391695.1" /db_xref="GI:330828743" /db_xref="GeneID:10486960" /translation="MIEFWVGVDGGGTHTRARIRDRAGKLLGEGRAAGSNLELGIPHA HANVLAAIASARLAAGIAIESEQQMGVGLALASAELADCYHALLEMPFPFASVRLTSD AFGACLGAFGGREGAILIAGTGSVGLIYQEGQIRTCSGRGFPISDIGSGAWLGLRAIQ QSLLCHDGILPPSTLAIRLMDRFKRDQAEVVRWAARAIPADYGHFAPWVFDAASDGDE LANQLLDETCEQLRILLEGMTQLGARQIALLGGIGTRLAPRLGQLNLIPPQADALDGA ILFAQSEDFPCLHP" misc_feature complement(1152999..1153841) /locus_tag="B565_1043" /note="Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]; Region: COG2971" /db_xref="CDD:32790" misc_feature complement(1153002..1153826) /locus_tag="B565_1043" /note="FGGY family of carbohydrate kinases, N-terminal domain; Region: FGGY_N; cl09121" /db_xref="CDD:195797" gene complement(1153834..1155567) /locus_tag="B565_1044" /db_xref="GeneID:10486961" CDS complement(1153834..1155567) /locus_tag="B565_1044" /codon_start=1 /transl_table=11 /product="endoglucanase, glycoside hydrolase family 9" /protein_id="YP_004391696.1" /db_xref="GI:330828744" /db_xref="GeneID:10486961" /translation="MELLINQVGYECDGHKVALLQTSPAPDLGGYIRLQRLDDGQILF ETPLQPADSVPGWQGRAYWRADFSAFKEPGHYRLEAITAQGIVRSTRFAIGQDLLASR CLSDVIHYFKGQRASGTFDRADRNARLFGTDQHKDVHGGWFDASGDMSKYLSHLSYAN YLNPQQTPMVVWALLKCRELLAPRRDIDGVNLCKRLNDEALHGADFLCRMQDESGFFY MTLFDKWSKDPAQRELCAYATQQGLKSANWQAGFRQGGGMAIAALARAARESVSGDFD ASRYAEAAKRGYLHLCEHNLAYLDDGVENIIDDYCALLAAVELTRTFGAEWLNEARAR ASKLCARQRPHPELGHYWSANEDGSRPYYHAAEAGLPVLALLEYLGVEPEQEHKAQAQ TVVEQALAAELALCARAGNPFSLARQYVKGVDEAPRVSFFMPHNNESGYWWQGENARL ASLAAMAFAGARHFPRQSQPLLTYGQRQLDWLLGQNPFNACMLAGYGINNPAYTAGYP NALGGICNGITAGFDDENDVAFIPEEYKDRLDQNWRWGEQWIPHAAWFALAISWQSAL SDRHEQGGHHD" misc_feature complement(1155328..1155555) /locus_tag="B565_1044" /note="E or 'early' set of sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end; Region: E_set; cl09101" /db_xref="CDD:195789" misc_feature complement(1153996..>1154157) /locus_tag="B565_1044" /note="endoglucanase; Region: PLN02420" /db_xref="CDD:178040" gene complement(1155682..1156674) /locus_tag="B565_1045" /db_xref="GeneID:10486962" CDS complement(1155682..1156674) /locus_tag="B565_1045" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter ATPase" /protein_id="YP_004391697.1" /db_xref="GI:330828745" /db_xref="GeneID:10486962" /translation="MQIAKTDAPIIEVQHLYKDFPINSNAIKSGKMRALSDITFNLHR GRALAVVGESGSGKSTIAKIIAKMYKLSAGRILYRGHDLEEFNKGTALLDYRQSVQMV WQDPFGSLNPTHTIYHHIARPLLLHSKVIDKKELPDMVYALLEKVGLTPAKATAAKYP HQLSGGQRQRVNIARNLAVEAEVVLADEPTSMLDVSIRIGILNLMEQMKNELGVSMLY ITHDIATARYVAEDLAVMYVGHMVEWGEVDEILHHPQHPYTQLLISAVPDPEKSIHAE LEGGRKGEIPLWTPESCGCPFAGRCNQAMPRCKEALPPITKLADNHFVRCYLYE" misc_feature complement(1155685..1156647) /locus_tag="B565_1045" /note="ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Region: DppD; COG0444" /db_xref="CDD:30793" misc_feature complement(1155940..1156647) /locus_tag="B565_1045" /note="The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane...; Region: ABC_NikE_OppD_transporters; cd03257" /db_xref="CDD:73016" misc_feature complement(1156498..1156521) /locus_tag="B565_1045" /note="Walker A/P-loop; other site" /db_xref="CDD:73016" misc_feature complement(order(1156012..1156014,1156111..1156116, 1156363..1156365,1156495..1156503,1156507..1156512)) /locus_tag="B565_1045" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73016" misc_feature complement(1156363..1156374) /locus_tag="B565_1045" /note="Q-loop/lid; other site" /db_xref="CDD:73016" misc_feature complement(1156159..1156188) /locus_tag="B565_1045" /note="ABC transporter signature motif; other site" /db_xref="CDD:73016" misc_feature complement(1156111..1156128) /locus_tag="B565_1045" /note="Walker B; other site" /db_xref="CDD:73016" misc_feature complement(1156093..1156104) /locus_tag="B565_1045" /note="D-loop; other site" /db_xref="CDD:73016" misc_feature complement(1156006..1156026) /locus_tag="B565_1045" /note="H-loop/switch region; other site" /db_xref="CDD:73016" misc_feature complement(1155751..1155951) /locus_tag="B565_1045" /note="Oligopeptide/dipeptide transporter, C-terminal region; Region: oligo_HPY; cl07097" /db_xref="CDD:195461" gene complement(1156686..1157705) /locus_tag="B565_1046" /db_xref="GeneID:10486963" CDS complement(1156686..1157705) /locus_tag="B565_1046" /codon_start=1 /transl_table=11 /product="dipeptide/oligopeptide/nickel ABC transporter ATPase" /protein_id="YP_004391698.1" /db_xref="GI:330828746" /db_xref="GeneID:10486963" /translation="MNKHPLLSVRNLCVDYITENGDVRAVNSVSFDIRQGEIFGLAGE SGCGKSTVAFSVARLHKPPAYISGGEILFKGENILHYGDERLRSYRWQQVSVVFQSAM NALNPVLRMEEQFCDVLLAHNPGMTRYEAIKRAQELLTIVDIHPSRLKDYPHQFSGGM RQRLVIAIAMALNPELLIMDEPTTALDVVVQREILQKVYALKEKFNFSILFITHDLSL MVEFCDRIGIMYAGELVEVAPSKAILTAPLHPYTRGLGNSFPPLHGPKKVLEGIPGTP LNLLEVPVGCRFQARCGKVHDRCRQEYTKLAEIRPGQQTACHLYEEQGLQQDSVIYLD KAAGC" misc_feature complement(1156743..1157690) /locus_tag="B565_1046" /note="ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Region: DppD; COG0444" /db_xref="CDD:30793" misc_feature complement(1156992..1157690) /locus_tag="B565_1046" /note="The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane...; Region: ABC_NikE_OppD_transporters; cd03257" /db_xref="CDD:73016" misc_feature complement(1157556..1157579) /locus_tag="B565_1046" /note="Walker A/P-loop; other site" /db_xref="CDD:73016" misc_feature complement(order(1157064..1157066,1157163..1157168, 1157409..1157411,1157553..1157561,1157565..1157570)) /locus_tag="B565_1046" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73016" misc_feature complement(1157409..1157420) /locus_tag="B565_1046" /note="Q-loop/lid; other site" /db_xref="CDD:73016" misc_feature complement(1157211..1157240) /locus_tag="B565_1046" /note="ABC transporter signature motif; other site" /db_xref="CDD:73016" misc_feature complement(1157163..1157180) /locus_tag="B565_1046" /note="Walker B; other site" /db_xref="CDD:73016" misc_feature complement(1157145..1157156) /locus_tag="B565_1046" /note="D-loop; other site" /db_xref="CDD:73016" misc_feature complement(1157058..1157078) /locus_tag="B565_1046" /note="H-loop/switch region; other site" /db_xref="CDD:73016" misc_feature complement(1156749..1157009) /locus_tag="B565_1046" /note="Oligopeptide/dipeptide transporter, C-terminal region; Region: oligo_HPY; cl07097" /db_xref="CDD:195461" gene complement(1157702..1158622) /locus_tag="B565_1047" /db_xref="GeneID:10486964" CDS complement(1157702..1158622) /locus_tag="B565_1047" /codon_start=1 /transl_table=11 /product="chitooligosaccharide transport system permease" /protein_id="YP_004391699.1" /db_xref="GI:330828747" /db_xref="GeneID:10486964" /translation="MRMPTILKILLGNKKAACGLAIVVAFVLMALFAPILASNEPTKR VARPHQPPSAEFVMGSTRMGHDIWAQFTNGARISLLVGFSAGLLVCTLAVAIGITAGY FGGLVDECLTFLMNVVLVIPNLPLLLVLASFIGEASPAVIAVIIGLTSWAYGARVIRA QTLALREKEFVIAAEVLGEPAWRIILVEILPNLISIIGVSFIGSIIYAIVTEATLEFL GLGDPTVVSWGIMLYNAQTSSAILVGAWWEILAPCFAIATLGAGLALLNFAIDEIANP QLRSHKGLSRWKKLATPVATPLSAAQEKTA" misc_feature complement(1157783..1158622) /locus_tag="B565_1047" /note="ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Region: DppC; COG1173" /db_xref="CDD:31366" misc_feature complement(1157888..1158400) /locus_tag="B565_1047" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(1157888..1157890,1157897..1157902, 1157930..1157935,1157972..1157977,1157984..1157995, 1158014..1158016,1158023..1158028,1158068..1158070, 1158119..1158121,1158128..1158133,1158143..1158145, 1158149..1158154,1158161..1158163,1158167..1158169, 1158173..1158178,1158230..1158232,1158236..1158241, 1158248..1158277,1158281..1158292,1158320..1158322, 1158335..1158340,1158347..1158352)) /locus_tag="B565_1047" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(1157978..1157995,1158230..1158274)) /locus_tag="B565_1047" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature complement(order(1157900..1157902,1157930..1157932, 1157939..1157941,1157975..1157977,1158191..1158193, 1158230..1158232)) /locus_tag="B565_1047" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature complement(order(1158047..1158049,1158059..1158064, 1158080..1158118)) /locus_tag="B565_1047" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene complement(1158624..1159607) /locus_tag="B565_1048" /db_xref="GeneID:10486965" CDS complement(1158624..1159607) /locus_tag="B565_1048" /codon_start=1 /transl_table=11 /product="peptide ABC transporter permease" /protein_id="YP_004391700.1" /db_xref="GI:330828748" /db_xref="GeneID:10486965" /translation="MGFILRRFSFYLVAFLVAATINFLLPRAMPGDPVSVMFARAGAM MEPAALEALKATFGFVDGPIGTQFLTYVKSVFTWDLGTSVRFYPQQVSDVLGRAIGWT LFLVGTSTILSFSIGSIVGIFAAWYRGGRMDSILSPLTLVMQAIPPVVVSLLALFLFG VSLEWLPIGYAYSPEIKADWGWEHIKSIMTHAIMPVLTLAVVQVGGFLITMRNNMINL LGEDYITMAKAKGLSSNRVIFNYGARNAILPSVTALSMALGFVIGGSLITEVIFNYPG LGLTLYQGILARDYPLIQGQLLIMTITMLSFNFLADVLYVFLDPRLRTGGK" misc_feature complement(1158630..1159607) /locus_tag="B565_1048" /note="ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Region: DppB; COG0601" /db_xref="CDD:30946" misc_feature complement(1158681..1159313) /locus_tag="B565_1048" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(1158681..1158686,1158693..1158698, 1158705..1158710,1158714..1158719,1158726..1158731, 1158759..1158764,1158798..1158803,1158810..1158821, 1158840..1158842,1158849..1158854,1158894..1158896, 1158945..1158947,1158954..1158959,1158969..1158971, 1158975..1158980,1158987..1158989,1158993..1158995, 1158999..1159004,1159140..1159142,1159146..1159151, 1159158..1159187,1159191..1159202,1159233..1159235, 1159248..1159253,1159260..1159265)) /locus_tag="B565_1048" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(1158804..1158821,1159140..1159184)) /locus_tag="B565_1048" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature complement(order(1158729..1158731,1158759..1158761, 1158768..1158770,1158801..1158803,1159017..1159019, 1159140..1159142)) /locus_tag="B565_1048" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature complement(order(1158873..1158875,1158885..1158890, 1158906..1158944)) /locus_tag="B565_1048" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene complement(1159726..1161411) /locus_tag="B565_1049" /db_xref="GeneID:10486966" CDS complement(1159726..1161411) /locus_tag="B565_1049" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter periplasmic binding protein" /protein_id="YP_004391701.1" /db_xref="GI:330828749" /db_xref="GeneID:10486966" /translation="MLAKVSKISTAVMLGTMMLAGAAGNAMAAENKTVLTMVAQQETA WVKNFNPFLQAGLLHTTRHFIYEPLVIFNDMQGGKPVYRLATNYAFSDDLKSVTFDLR DGVKWSDGEAFDADDIIFSFNLVKANKALDERSIWTQIKSVEKLAPNKVKFDLTEVNT NVVNDLVLVPIVPEHQWKSVKDPVAFTNDKPVGTGPFTEVDNFSAQLYTQCRNPHYWD NANLAIDCIRMPQMATNDQVLAAVMKGDIDWFGSFVPDIERLYVGNDPKNNKYWFPAS GTVAFNVNFQTKNPGNNEAFNDINFRRAFSMAMDRQSMVDIAGYGYPTVNEYPSGLGK AFDSWNNPEVDKKYGKYNKFDLEGAKALLKEAGYKDCDGDKFLDTPSCKKIEFKVLVP NGWTDWVNTVQIGVEGLQALGLNAKTATPEATVWTENLITGDFDVALQGYFAGANPHK YFETAFHSRNMGDRGNRFAAPRYKDPELDKLIDDFTQTADAAKQKEIMFAIQDRVGAN QTIIPVFNNPTWYEYSTKRFNGWFSADNPVAKPQLHPDTPERLLHVLSLKPNS" misc_feature complement(1159801..1161312) /locus_tag="B565_1049" /note="The substrate binding domain of a cellulose-binding protein from Thermotoga maritima contains the type 2 periplasmic binding fold; Region: PBP2_TmCBP_oligosaccharides_like; cd08509" /db_xref="CDD:173874" misc_feature complement(order(1159852..1159854,1160089..1160091, 1160659..1160661,1161295..1161297)) /locus_tag="B565_1049" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:173874" misc_feature complement(1160023..1161177) /locus_tag="B565_1049" /note="Bacterial extracellular solute-binding proteins, family 5 Middle; Region: SBP_bac_5; pfam00496" /db_xref="CDD:189574" gene complement(1161827..1165222) /locus_tag="B565_1050" /db_xref="GeneID:10486967" CDS complement(1161827..1165222) /locus_tag="B565_1050" /codon_start=1 /transl_table=11 /product="sensory box sensor histidine kinase/response regulator" /protein_id="YP_004391702.1" /db_xref="GI:330828750" /db_xref="GeneID:10486967" /translation="MLAFFMLGMVPFLVITLFFLYSHGKDLTTQTSNHLVSVRNIKKS QLEDYFNNLKEQIINFSQQDFAGNSIGRFYGFTGAFEKLGTTPQEARSRAQARYLPGS WDQLRKPDSQVEIEPSITALILADEMYGRVHQRFHRGYADMVRKSNYSDIFLVDLNGD VVYSVTKHPNFATNLLSGPYQGSGLGQTFAKIKRRLDGGQKPQQIFEFTDFGRNELTG QVVAYMAAPVMQYDYVRGVVIFELLPDKLNQIMAEREGLGETGETILIGPDKRMRADA WLAPEFSVENSFSPNFRPLQTPLITKTLSGEQGVGLFHSYQDDEVLAAYTQVKVFDTE WAFIAEISTREAYAPIRQLETLVIVLGAGSVLLLILFSRWLSHSITAPLRSLTEAAEQ VADGALDHPIAIERTGDDIDRLAEAFRHMQRSVKDKIELIEQQTQELQQQVKLTHKQN LSLQQADKLKDELLANTSHELRTPIHGIKGMAESMLASQQDLTEGQQKQLGLIIKSAD GLARLVDDLLDYHQMRYGQLEIHSQPVSSKGVIRLVLDLCQHLVQAKPLTLVDISPAE LPPVLADEQRLEQVLYNLVGNAIKYTPQGKVVLSAIVENNFLRIKVTDTGIGIAPDHL EHIFEPLVQMSPEVSKQGAGLGLSITRQLVHLMGGELFVESEPSVGSTFAFTLPLATG KAANLTLDSRQIEHQLVRQQPLILPDWESDDLPPPPEDAPLILVVDDEPINLHILRHL LQPCGYRILPSSDGHDALAKLAEEPVDLILLDVMMPTLSGFDVCRRLRQQHPKDMLPV LLLTALNQPKDIEEGFGAGANDYLVKPFCKEELFARVKALLEAKAGRASLVENRLLKQ EIEHRLTLQDRLHQDQQRLLALLGEGADPMIFIDEQGTVLFASRVMARLLGQEPEAME GQPLNEWLATPLQQQWPDLASEREHNLEFLVAGQKDVLNARALPIALGGQAAFALTLS TELRQDENRVMALENALKNLSRQAIIEDEQLLGELSRLGGEFRSLADDLIRQQDDEPL RRALVETMQLTLDAWQQGTGKGKIVLAEKSKLWRVYMDRSSPQTRTLDKYLSLDTLPK SPRWKTVVATTEYVLGHCPLNDHQRQQLQHSAQTLRQLANRKP" misc_feature complement(1163168..1164259) /locus_tag="B565_1050" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:30987" misc_feature complement(1163942..1164088) /locus_tag="B565_1050" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cd06225" /db_xref="CDD:100122" misc_feature complement(order(1163948..1163953,1163960..1163965, 1163969..1163974,1163981..1163986,1163990..1163995, 1164044..1164046,1164050..1164055,1164062..1164067, 1164071..1164076,1164083..1164088)) /locus_tag="B565_1050" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100122" misc_feature complement(1163663..1163854) /locus_tag="B565_1050" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature complement(order(1163672..1163674,1163684..1163686, 1163693..1163695,1163705..1163707,1163714..1163716, 1163726..1163728,1163780..1163782,1163789..1163791, 1163801..1163803,1163810..1163812,1163822..1163824, 1163834..1163836)) /locus_tag="B565_1050" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature complement(1163816..1163818) /locus_tag="B565_1050" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature complement(1163192..1163494) /locus_tag="B565_1050" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(1163204..1163206,1163210..1163215, 1163228..1163230,1163234..1163236,1163282..1163293, 1163366..1163371,1163375..1163377,1163381..1163383, 1163387..1163389,1163453..1163455,1163462..1163464, 1163474..1163476)) /locus_tag="B565_1050" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(1163462..1163464) /locus_tag="B565_1050" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(1163285..1163287,1163291..1163293, 1163369..1163371,1163375..1163377)) /locus_tag="B565_1050" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature complement(1162706..1163047) /locus_tag="B565_1050" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(1162715..1163047) /locus_tag="B565_1050" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature complement(order(1162748..1162753,1162760..1162762, 1162817..1162819,1162883..1162885,1162907..1162909, 1163036..1163041)) /locus_tag="B565_1050" /note="active site" /db_xref="CDD:29071" misc_feature complement(1162907..1162909) /locus_tag="B565_1050" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(1162883..1162891,1162895..1162900)) /locus_tag="B565_1050" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(1162745..1162753) /locus_tag="B565_1050" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(1162292..1162573) /locus_tag="B565_1050" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:117025" misc_feature complement(<1162457..1162573) /locus_tag="B565_1050" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" gene 1165514..1165589 /locus_tag="B565_t037" /db_xref="GeneID:10486968" tRNA 1165514..1165589 /locus_tag="B565_t037" /product="tRNA-Gly" /db_xref="GeneID:10486968" gene 1165647..1165720 /locus_tag="B565_t038" /db_xref="GeneID:10490022" tRNA 1165647..1165720 /locus_tag="B565_t038" /product="tRNA-Cys" /db_xref="GeneID:10490022" gene complement(1165769..1166062) /locus_tag="B565_1051" /db_xref="GeneID:10490023" CDS complement(1165769..1166062) /locus_tag="B565_1051" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391703.1" /db_xref="GI:330828751" /db_xref="GeneID:10490023" /translation="MKLPEVALLVLMVALTRAQLEEWQLNREDAIVLAERGVPTVSLW QCGTLKQRIADLNQHSAEVQFQYRGQNMADVSHYLEREWKQAGCEQLLVQQGY" gene 1166275..1166475 /locus_tag="B565_1052" /db_xref="GeneID:10486969" CDS 1166275..1166475 /locus_tag="B565_1052" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="YP_004391704.1" /db_xref="GI:330828752" /db_xref="GeneID:10486969" /translation="MFHPFSLTQIILRRIYVLLVGILAFPVMLFRSDRARFYSYLHRI WNKTSTKPVWLKMSERGERIFY" misc_feature 1166275..1166463 /locus_tag="B565_1052" /note="Protein of unknown function (DUF2517); Region: DUF2517; pfam10725" /db_xref="CDD:119245" gene 1166913..1167176 /locus_tag="B565_1053" /db_xref="GeneID:10486970" CDS 1166913..1167176 /locus_tag="B565_1053" /codon_start=1 /transl_table=11 /product="signal peptide protein" /protein_id="YP_004391705.1" /db_xref="GI:330828753" /db_xref="GeneID:10486970" /translation="MNVKKSTAIASAMTGLLALGAQFIAAPAMAADEKEKCYGVVKAS KNDCATKSSSCAGTAKEDAQGDAFVVMPKGLCEKLVGGSLQPK" misc_feature 1167012..1167167 /locus_tag="B565_1053" /note="Predicted integral membrane protein (DUF2282); Region: DUF2282; cl02366" /db_xref="CDD:194297" gene 1167194..1168096 /locus_tag="B565_1054" /db_xref="GeneID:10486971" CDS 1167194..1168096 /locus_tag="B565_1054" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391706.1" /db_xref="GI:330828754" /db_xref="GeneID:10486971" /translation="MANGRPLHLLWLAKASLAMNPLIGIGLRTPHYDEIRQTLPAVGW LEVHSENYFERHSQGFQVLAELAQHYPVSLHGVGMSLGSADPLDPHHLQQLSTLVAAI RPARISEHLSWGSIGGRYFNDLLPVPYTRASLRNMSDKIQQVQQTLGCRMLIENPSSY LQLPGEMSEWEFLAELQQRSECGILLDLNNLYVSAFNHGFSCDEYLAAIDLATVGEIH LAGYTEKQLPEGSLYIDTHSAPVVAPVWELYRQICRKQAIPTLIEWDLEIPPLPVLLA EAAQAGAILDEECAMSAPREVAHG" misc_feature 1167248..1168057 /locus_tag="B565_1054" /note="hypothetical protein; Provisional; Region: PRK05409" /db_xref="CDD:180060" misc_feature 1167263..1168087 /locus_tag="B565_1054" /note="Protein of unknown function (DUF692); Region: DUF692; cl01263" /db_xref="CDD:186406" gene 1168089..1168841 /locus_tag="B565_1055" /db_xref="GeneID:10486972" CDS 1168089..1168841 /locus_tag="B565_1055" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391707.1" /db_xref="GI:330828755" /db_xref="GeneID:10486972" /translation="MAELAQLQQHFADGLLGAPDAISPHISSRLFSAESVLQVYRNHF ILSLGEVLASSYPAVKAMVGDDFFAAAARGFVLAEPLREGCVMHYGAGFGQWLARLPT TTGLPWLEALAQFEWQLERASLLPLESRCWPAERLAALSPQQWDRLRLLPATDLLLVA SDYPVLALWQMALHGGEAVEVLDAPVWLALKKQPDCRVAPLPLTVGEWALLQGCLAGT ALVDLLAADPAASEHLTRLITLGLLVDMEVMP" misc_feature 1168101..1168382 /locus_tag="B565_1055" /note="Uncharacterized protein conserved in bacteria (DUF2063); Region: DUF2063; cl01262" /db_xref="CDD:154303" gene 1168838..1169281 /locus_tag="B565_1056" /db_xref="GeneID:10486973" CDS 1168838..1169281 /locus_tag="B565_1056" /codon_start=1 /transl_table=11 /product="putative transmembrane protein" /protein_id="YP_004391708.1" /db_xref="GI:330828756" /db_xref="GeneID:10486973" /translation="MMANKWLALASSSGDLPRWSSTGVLLLARLWVASVFITSGWLKL TAWESTLYLFESEYQVPLLPWLWAAYLGTATELLLPLFLLAGLFTRPAALLLFGFNIM AVISYPTLWAGGFYDHQLWGWMLLTLIIWGGGVLSLDHWLTRRNH" misc_feature 1168907..1169275 /locus_tag="B565_1056" /note="DoxX; Region: DoxX; cl00976" /db_xref="CDD:154119" gene 1169380..1169859 /locus_tag="B565_1057" /db_xref="GeneID:10486974" CDS 1169380..1169859 /locus_tag="B565_1057" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004391709.1" /db_xref="GI:330828757" /db_xref="GeneID:10486974" /translation="MIIRQARAADIPALVALRMELFCEVGELVTPQADPALWQATLDY FTRAMSEESALSWLAEADTQKGGKQIVAAGTLALFVRPPYPGNLAGVEGYLLNMYTRS QWRQQGIATALLDAITAFASARQLGKVWLHASEQGRPLYERIGFVANPAYLEWDLAP" misc_feature 1169596..1169820 /locus_tag="B565_1057" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene 1169950..1171251 /locus_tag="B565_1058" /db_xref="GeneID:10486975" CDS 1169950..1171251 /locus_tag="B565_1058" /codon_start=1 /transl_table=11 /product="Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer" /protein_id="YP_004391710.1" /db_xref="GI:330828758" /db_xref="GeneID:10486975" /translation="MFNFKLKAELQACQMQLAQAQAFIDAVKVGVATISFTPSGEILE ANPLFLNVVGYSEQEVIGKHHRIFCDAHYVQSSSYAQFWEQLRQGHSHSGTYQRFDKQ GRELWLEATYFPVKLDGKVVRVVKIASDITESYQQLSRQKAIISALDRALAIIEFTPM GEIVTANQNFLSCVGYSLSQLKGQHHRLFCDESFYREQPHFWDDLAHGQLKSGLFSRR DSHGNEIWLEATYNPIKDESGKVVKVIKFASEVTERIKRAQAVSEAANIAQTISQETT RFAETGSELLAASVAISSAISEQVSRTSGLIGQLNEQSKSIEAIVSTISSIAEQTNLL ALNAAIEAARAGDQGRGFAVVADEVRQLAARTSLSTGEIASVVQKNRELTAQITGNIN EVATSAQRGKEQIGEVSGVMAQIEQGAINVTETVSNLAIGS" misc_feature 1170037..1170342 /locus_tag="B565_1058" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature 1170043..1170717 /locus_tag="B565_1058" /note="FOG: PAS/PAC domain [Signal transduction mechanisms]; Region: AtoS; COG2202" /db_xref="CDD:32384" misc_feature order(1170082..1170084,1170094..1170096,1170112..1170114, 1170151..1170156,1170163..1170168,1170244..1170246, 1170256..1170258) /locus_tag="B565_1058" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature order(1170142..1170144,1170154..1170156,1170184..1170186, 1170193..1170198,1170277..1170279,1170283..1170285) /locus_tag="B565_1058" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature 1170406..1170702 /locus_tag="B565_1058" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature order(1170445..1170447,1170457..1170459,1170475..1170477, 1170514..1170519,1170520..1170522,1170598..1170600, 1170613..1170615) /locus_tag="B565_1058" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature order(1170505..1170507,1170517..1170519,1170538..1170540, 1170547..1170552,1170634..1170636,1170640..1170642) /locus_tag="B565_1058" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature 1170868..>1171248 /locus_tag="B565_1058" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 1171432..1171986 /locus_tag="B565_1059" /db_xref="GeneID:10486976" CDS 1171432..1171986 /locus_tag="B565_1059" /codon_start=1 /transl_table=11 /product="multidrug ABC transporter ATPase and permease" /protein_id="YP_004391711.1" /db_xref="GI:330828759" /db_xref="GeneID:10486976" /translation="MALQQKGRAMALLVMVASMGLGGCMGQMGLSGMVTKGNLSVVDN RYARAGVFMLLSPVYGLAATADLFVFNTIEFWSGKNPITGKSPAVVDMKANPVIKVNQ HLDPALKKVPLAMLPQGVREVEISYPDEHTAQMEVHYLDGRRSMMRGEKRGELMDIYF DGRFVSTLSRAELEQMSENARTAA" misc_feature 1171447..1171971 /locus_tag="B565_1059" /note="Domain of unknown function (DUF3332); Region: DUF3332; pfam11810" /db_xref="CDD:152246" gene complement(1172045..1173103) /locus_tag="B565_1060" /db_xref="GeneID:10486977" CDS complement(1172045..1173103) /locus_tag="B565_1060" /codon_start=1 /transl_table=11 /product="inner membrane protein YeeA" /protein_id="YP_004391712.1" /db_xref="GI:330828760" /db_xref="GeneID:10486977" /translation="MRLDAPLSRLDLLVYGRYRIVHGLRIALAFMLTFLLTRELKLPE STWPLITLVVVMGPISFWGNVLSRALQRVVGTIFGASCGVVALYLEIYSLPLTLIWCG CIMFLCGYLALGKRPYVGLLIGITLGVTMGAMPGDIETALWRSADVILGSLLALLFCS IYPQRAYSHWRLQLHQILQQSGRLYHTHLSPNVLERPRLKHNLSQLLAQTGKLRALLA PAAKETRHSVALFDAVQVTMRNTLCTLEMLANTYWNDRESHFLMQSTAALQACHLATE EAINQLALMMQTGDGRGADDAIARLHEVATRVSLPPNAEAAINGYLWLNVQLTEQLTH LRRLLGLILTPPHRKQPD" misc_feature complement(1172183..>1173076) /locus_tag="B565_1060" /note="Predicted membrane protein [Function unknown]; Region: COG1289" /db_xref="CDD:31480" gene complement(1173166..1174944) /locus_tag="B565_1061" /db_xref="GeneID:10486978" CDS complement(1173166..1174944) /locus_tag="B565_1061" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein" /protein_id="YP_004391713.1" /db_xref="GI:330828761" /db_xref="GeneID:10486978" /translation="MTPAPTLPLLGFAAWSGTGKTTLLEQLIPLLVDRGLRIGVLKHA HHDFDIDQPGKDSYRLRKAGAQQMMVASRRRHARITETTHGETELAEADFRQLLASFD QTELDLLLVEGFKHEHFPKIELHRAEIGKPLLFPEDSDIIALASDQPQQSGEQQQTSL PRLDINDLAAIADFVCRWLDGCQSKEPEAGKGFLSVEAARNAILAALTPSNACIDKPL AQCHGAVLAADLISPINVPPHANSAMDGIGLRSDDLATGRWQLVGEVLAGQQRHEPVL AGQAVQIMTGAPLPPGVDTVVMREETLIEGEWVTVTAPIRAGQNVRLAGEDLAKGAVA IPAGTWLGAPQLGLAASLGQASLTVRTPLKVALFSTGDEVQAPGEQLAPGHIFDSNRF TLMALIRAAGCEVMDLGIIPDDKTILRQQLEQAAASADLVLSSGGVSVGNADFIKLVL AELGQIDFWRIQMRPGRPLAFGKLGQTPFFGLPGNPVAAMICVLQFVEPAIARLQGKR WQPLRLSALADEKMKSRPGRTEFLRGIFHQDRNGQLRVRTTGPQGSGILSSMAEANCL IEIVPDQPGIAIGERVWIHPLQGRLA" misc_feature complement(1173172..1174944) /locus_tag="B565_1061" /note="putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA; Provisional; Region: PRK14491" /db_xref="CDD:184707" misc_feature complement(1174417..1174923) /locus_tag="B565_1061" /note="Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In E. coli, the synthesis of Moco involves genes from several loci: moa...; Region: MobB; cd03116" /db_xref="CDD:48380" misc_feature complement(order(1174882..1174890,1174903..1174905)) /locus_tag="B565_1061" /note="Walker A motif; other site" /db_xref="CDD:48380" misc_feature complement(1173184..1174359) /locus_tag="B565_1061" /note="MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and...; Region: MoeA; cd00887" /db_xref="CDD:58168" misc_feature complement(order(1173196..1173198,1173280..1173282, 1173403..1173405,1173769..1173771,1173778..1173780, 1173784..1173786,1173886..1173888,1173892..1173897, 1173904..1173906,1173910..1173921,1173964..1173966, 1174288..1174290)) /locus_tag="B565_1061" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:58168" misc_feature complement(order(1173634..1173636,1173706..1173708, 1173826..1173828,1173832..1173837)) /locus_tag="B565_1061" /note="putative functional site; other site" /db_xref="CDD:58168" misc_feature complement(order(1173472..1173474,1173481..1173483, 1173493..1173498,1173628..1173636)) /locus_tag="B565_1061" /note="putative MPT binding site; other site" /db_xref="CDD:58168" gene complement(1174941..1175585) /locus_tag="B565_1062" /db_xref="GeneID:10486979" CDS complement(1174941..1175585) /locus_tag="B565_1062" /codon_start=1 /transl_table=11 /product="molybdopterin-guanine dinucleotide biosynthesis protein A" /protein_id="YP_004391714.1" /db_xref="GI:330828762" /db_xref="GeneID:10486979" /translation="MTSKSDSHSDPVAVSAVILAGGRATRMGGEDKGWVALAGRPLID HVLARLRPQVDEVLINANRSQPRYQALAPVISDDNNDYLGPLAGMQAGLAAARHDWVL FVPCDGPALPLDLMSRFRAALTPDTELVVAHDGDWLQPVVALLHKSLLPSLTAALAEG ERKIDIWFARHNMAVVSFADQPDAFINLNSPAELAAYEARLLATAIDPQQGVTS" misc_feature complement(1175013..1175549) /locus_tag="B565_1062" /note="molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed; Region: mobA; PRK00317" /db_xref="CDD:178976" misc_feature complement(1175013..1175546) /locus_tag="B565_1062" /note="MobA catalyzes the formation of molybdopterin guanine dinucleotide; Region: MobA; cd02503" /db_xref="CDD:133000" misc_feature complement(order(1175265..1175267,1175271..1175273, 1175322..1175324,1175331..1175336,1175355..1175357, 1175406..1175408,1175490..1175492,1175517..1175519, 1175523..1175531)) /locus_tag="B565_1062" /note="GTP binding site [chemical binding]; other site" /db_xref="CDD:133000" gene complement(1175557..1176252) /locus_tag="B565_1063" /db_xref="GeneID:10486980" CDS complement(1175557..1176252) /locus_tag="B565_1063" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter ATP-binding protein" /protein_id="YP_004391715.1" /db_xref="GI:330828763" /db_xref="GeneID:10486980" /translation="MALTAHQLTMRFGERQLFEIDRLAIAPGDAIWLHGANGVGKTTL LKILAGLLAPTRGHTNLPGRWQQRINRLLKRDLGPGRVTYLHQTPYLFDRTVHDNVAW ALDKQLGSEIRVFEALRRVELEGLAREHISILSGGERQRLAMARAWALQPAFLLMDEP TANLDTHSVALMAALAQDLREHGSGLVVISHQSNALTSLCERQWTLARGQLQETTPLK IIERHDFKKRQPL" misc_feature complement(1175569..1176252) /locus_tag="B565_1063" /note="ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]; Region: CbiO; COG1122" /db_xref="CDD:31319" misc_feature complement(1175623..1176216) /locus_tag="B565_1063" /note="Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This...; Region: ABC_cobalt_CbiO_domain1; cd03225" /db_xref="CDD:72984" misc_feature complement(1176127..1176150) /locus_tag="B565_1063" /note="Walker A/P-loop; other site" /db_xref="CDD:72984" misc_feature complement(order(1175680..1175682,1175776..1175781, 1175992..1175994,1176124..1176132,1176136..1176141)) /locus_tag="B565_1063" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72984" misc_feature complement(1175992..1176003) /locus_tag="B565_1063" /note="Q-loop/lid; other site" /db_xref="CDD:72984" misc_feature complement(1175824..1175853) /locus_tag="B565_1063" /note="ABC transporter signature motif; other site" /db_xref="CDD:72984" misc_feature complement(1175776..1175793) /locus_tag="B565_1063" /note="Walker B; other site" /db_xref="CDD:72984" misc_feature complement(1175758..1175769) /locus_tag="B565_1063" /note="D-loop; other site" /db_xref="CDD:72984" misc_feature complement(1175674..1175694) /locus_tag="B565_1063" /note="H-loop/switch region; other site" /db_xref="CDD:72984" gene complement(1176368..1177069) /locus_tag="B565_1064" /db_xref="GeneID:10486981" CDS complement(1176368..1177069) /locus_tag="B565_1064" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter permease" /protein_id="YP_004391716.1" /db_xref="GI:330828764" /db_xref="GeneID:10486981" /translation="MPTLLDTTLAALALLFSGDTELWQVVGVSFSVSCIALLLVLVPA LLLGFALAYLPLPGRWFWLSCINTLQSVPTVVIGLLLYMLLSRAGPFGDWKLLFTQQA MVVGQMLIAFPVIATMAHAAFVQSDRRAWETALTLGVSWPKALIGLMHECRFGLLAAI IGAFSRIVTEVGCSMMVGGNILHFTRNIPTAIALETQKGAFTQGVALGIVLLTLALLL NLLLTACRGHSYLKN" misc_feature complement(1176440..1177024) /locus_tag="B565_1064" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cl00427" /db_xref="CDD:193813" gene complement(1177199..1178029) /locus_tag="B565_1065" /db_xref="GeneID:10486982" CDS complement(1177199..1178029) /locus_tag="B565_1065" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter periplasmic-binding protein" /protein_id="YP_004391717.1" /db_xref="GI:330828765" /db_xref="GeneID:10486982" /translation="MTIKTNLKRFALSLAASLLIAGAAHADTTKAPIRLATTTSTEQS GLLGWLLPQFTKETGYPVQVMAAGTGQSLKMGENGDADLVMTHAPSAEKKFVDAGFGI EPVHLMYNDFVIVGPAKDPAGLGKLHDAAKGLQAIKEQGQTFISRGDESGTHIKEKTL WQAADVKPEFAGYKSIGQGMGPTLTMASELGAYTLTDRGTWLAYQSKLDLAVLLEGDK RLFNPYQVILVNPKRYPDLNTEGARTLKNWLVSEHGQKLIGDFKVAGQALFVADANGK " misc_feature complement(<1177517..1177933) /locus_tag="B565_1065" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cd05466" /db_xref="CDD:176102" misc_feature complement(order(1177517..1177519,1177832..1177846, 1177847..1177849,1177865..1177867,1177874..1177879, 1177883..1177888)) /locus_tag="B565_1065" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene 1178285..1179640 /locus_tag="B565_1066" /db_xref="GeneID:10486983" CDS 1178285..1179640 /locus_tag="B565_1066" /codon_start=1 /transl_table=11 /product="Fis family two component sigma54 specific transcriptional regulator" /protein_id="YP_004391718.1" /db_xref="GI:330828766" /db_xref="GeneID:10486983" /translation="MTLPPSRWSALSLLIVDDEPGMRSFLAKALAKRFAQIETAASVE EAEALRCRLHFDLIIADIRLPGRSGIEWHEAIDPATRRSDIIFMTGFGDMETALKALR LGASDFILKPFNLDQMVQAVDRVIERRQMERENLLLRREVSKLFPPTLIGDSAKTREL KTLIARVAPSNAAVLVEGESGTGKELVARALHQLSGRMGAFVPLNCASIAPELLESEL FGHVQGAFTGARKGRDGLFRVAHQGTLFLDEIGEMPLAMQASLLRALEQKAIRPVGAE RELAVDVRIVAATNRNLKAEVEAGRFREDLFYRLNVVALPVAPLRERIDDIPALVHHF TRQLTAEMGMGSLSWTHEDVVAMQAYPWPGNVRELRNLIERCLLLGKPPADYWQSSKL AEQGASEEGYPLAWPLAEVEKAHILQVVASHDGNKSAASRVLGVARKTLDRKFKEWAI E" misc_feature 1178306..1179637 /locus_tag="B565_1066" /note="Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]; Region: AtoC; COG2204" /db_xref="CDD:32386" misc_feature 1178324..1178662 /locus_tag="B565_1066" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(1178333..1178338,1178465..1178467,1178489..1178491, 1178549..1178551,1178606..1178608,1178615..1178620) /locus_tag="B565_1066" /note="active site" /db_xref="CDD:29071" misc_feature 1178465..1178467 /locus_tag="B565_1066" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(1178474..1178479,1178483..1178491) /locus_tag="B565_1066" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 1178615..1178623 /locus_tag="B565_1066" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 1178756..1179223 /locus_tag="B565_1066" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 1178816..1178839 /locus_tag="B565_1066" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(1178819..1178842,1179026..1179028,1179152..1179154) /locus_tag="B565_1066" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 1179014..1179031 /locus_tag="B565_1066" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 1179209..1179211 /locus_tag="B565_1066" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 1179506..1179628 /locus_tag="B565_1066" /note="Bacterial regulatory protein, Fis family; Region: HTH_8; cl01091" /db_xref="CDD:186327" gene 1179666..1181768 /locus_tag="B565_1067" /db_xref="GeneID:10486984" CDS 1179666..1181768 /locus_tag="B565_1067" /codon_start=1 /transl_table=11 /product="sensory box sensor histidine kinase AtoS" /protein_id="YP_004391719.1" /db_xref="GI:330828767" /db_xref="GeneID:10486984" /translation="MQLTLLSRCMRALLPRCVRTKVRWRLLLLTSVPIMLTLVGMIAL TLYWTLTYSWQNLLTTVRSDLGVAHHAITVQQQRQTEHLEHLRDAWAFQLRLRESPDQ LHNWVMPLAANYGLDFLRLRRGPELDQLTAQERAALTAGRSVSHFVVWSQQEMLALSP QLAKRAVLWQRDGTRVVENRGLISLSLTPVMGRDGSLWAVLEGGELVNGSTRLVDELK GQVFAKNTLPDGSVGTVTLFLDDLRVSTNVPVSSSRQVGRAVGTRVSPPVREQVLGRG EMWVDRAFVHDAWYVSGYEPLLGARGERIGMLYVGFLEWPIIRTYLTNLVELGSGVVL LLLLSGLLVYRGARDLFSPIERMHKVVRQVQTGESARIGPLALDPDHELAQLGRQFDA MLDRQEAHQQQMARSADELEQKVAERTQSLELKTAELEDHIHMLTEARQQLLISEKLA ALGELSAGVAHEINNPLAVILGNVELMKLELGEAAEPVSEELALVLAQIERIRAITRS LLQYSRPGDYETAPVWQHLNPIIEESLTLVRSALRQQQVELVADLRAQQPIEADRQQL LQVLINLLVNASHALGEQGEIRVESRDWVDELGQLRGAEVRVIDNGSGIEAAIIDKIF DPFFTTRATGTGLGLALSHRIISRWGGELLVDSTPGQGSCFTVRLRSHALLPSGSEPA KLEGWRIALNAEGRETSD" misc_feature 1180764..1181705 /locus_tag="B565_1067" /note="Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]; Region: NtrB; COG3852" /db_xref="CDD:33642" misc_feature 1181010..1181207 /locus_tag="B565_1067" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature order(1181028..1181030,1181040..1181042,1181052..1181054, 1181061..1181063,1181073..1181075,1181082..1181084, 1181136..1181138,1181148..1181150,1181157..1181159, 1181169..1181171,1181178..1181180,1181190..1181192) /locus_tag="B565_1067" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature 1181046..1181048 /locus_tag="B565_1067" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature 1181400..1181672 /locus_tag="B565_1067" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(1181487..1181489,1181493..1181495,1181499..1181501, 1181505..1181510,1181571..1181582,1181628..1181630, 1181634..1181636,1181649..1181654,1181658..1181660) /locus_tag="B565_1067" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature order(1181499..1181501,1181505..1181507,1181571..1181573, 1181577..1181579) /locus_tag="B565_1067" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(1181849..1182715) /locus_tag="B565_1068" /db_xref="GeneID:10486985" CDS complement(1181849..1182715) /locus_tag="B565_1068" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391720.1" /db_xref="GI:330828768" /db_xref="GeneID:10486985" /translation="MNVKQVAEYLDLNEKKVYQLANEARIPATKATGKWLFPRSLLDR WLLGSCHEGVMNDRLLLAGSDDVLLHYASSRLAQQLGTQALVGYTPCGTRQGLAMLAR GHVDLCAIHWGQAEEAHLRHPALVQQYQGHRQWVIVHGFRRVQGLVLRQGLQPKEAKE ALDWRWAMRQEGAGSQRALQEWLQTQGESLTRLERTLEVNSERELAAAISRGDADVGP GAQSTATEFGLGFMPLSQECFDLVMPQGVFFRTLLQQLIGWLQSPEGRELAARLGGYD LTQSGKLVWSPQ" misc_feature complement(1182578..1182715) /locus_tag="B565_1068" /note="Helix-Turn-Helix DNA binding domain of transcription regulators from the MerR superfamily; Region: HTH_MerR-SF; cl02600" /db_xref="CDD:194374" misc_feature complement(1181933..1182496) /locus_tag="B565_1068" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(1182731..1183588) /locus_tag="B565_1069" /db_xref="GeneID:10486986" CDS complement(1182731..1183588) /locus_tag="B565_1069" /codon_start=1 /transl_table=11 /product="formate dehydrogenase accessory protein" /protein_id="YP_004391721.1" /db_xref="GI:330828769" /db_xref="GeneID:10486986" /translation="MTPTFIKSNAAAQLTMTVEVMDEQGTMNTRQIACERPLTVYLNW KEIVTLMTLGARPEALVLGYLKNQGFIEDISAIESVIVDWESEAAAVVSSQQADDLDK SLEKKTVTSGCGQGTMYGSVMKKLEGVVLAAPELKQSTLYALLKALSAHNETYKMAGA VHGCAICRGSEILSFVEDVGRHNAVDTLAGELWMRGESGHDKIFYTTGRLTSEMVIKV AQMGIPVLLSRSGVTQMGLDLARQLGITMIARAKGRHFEVFSGHDHMVLDEKPPVLAP SPAGRGMRD" misc_feature complement(1182800..1183492) /locus_tag="B565_1069" /note="FdhD/NarQ family; Region: FdhD-NarQ; cl00659" /db_xref="CDD:186130" gene complement(1183738..1184622) /locus_tag="B565_1070" /db_xref="GeneID:10486987" CDS complement(1183738..1184622) /locus_tag="B565_1070" /codon_start=1 /transl_table=11 /product="Tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein" /protein_id="YP_004391722.1" /db_xref="GI:330828770" /db_xref="GeneID:10486987" /translation="MIEVTDKCNLKCVYCYNEFSEKRQKDIDHNSLMRILLEAKKIGV FDINFCGGEPFSNRNFMSYLELAVELGFDVTINTNGTLINDKISKRLMELDLIQHIQV SFDGHTEDLNNKTRGKFPRAYRGFQLLCQEAACRTLSPSVGIVLSKTNYRHLEEIISH FSTYTNRIHVMNVMGHENLMLDDMDKFILEKEIIPSIKTICKKTNTQVTKIHKSQTCN DFLFKKAHVDCLAGHTFLAISSNLDIFPCDIHRKSIYKWASDGDIMIAHKKALEEWRS MNKPWCFHDKKCRSCHGI" misc_feature complement(1184032..1184619) /locus_tag="B565_1070" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(1184104..1184109,1184206..1184208, 1184314..1184316,1184386..1184394,1184464..1184469, 1184473..1184475,1184575..1184583,1184587..1184589, 1184593..1184595,1184599..1184601)) /locus_tag="B565_1070" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" gene complement(1184717..1184932) /locus_tag="B565_1071" /db_xref="GeneID:10486988" CDS complement(1184717..1184932) /locus_tag="B565_1071" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391723.1" /db_xref="GI:330828771" /db_xref="GeneID:10486988" /translation="MTTVRKVEVLLDSVYTVEPLNEVYAWNDGHWNYQWSGRSSKFNL IDGVKQRIEPDGSIIIKNKKGNIIRLV" gene 1185364..1185903 /locus_tag="B565_1072" /db_xref="GeneID:10486989" CDS 1185364..1185903 /locus_tag="B565_1072" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391724.1" /db_xref="GI:330828772" /db_xref="GeneID:10486989" /translation="MQDTTNTLPPQRWLQLELKAIDSQVGRWQSRRFEIAALHPAESE AAGALPLTLFRDERGDYRFNLSSGSPRLFVTGSRVDSGFVADGLTLSQTVAAAYMDGE RQVLSCPLPEALQAWVEAFIGRHGELLEARRKGKKGKGRAQDQLGVDSQDQASCGAVK ATGPDGRERGCDSGNRAHE" misc_feature 1185403..1185744 /locus_tag="B565_1072" /note="Protein of unknown function (DUF3305); Region: DUF3305; pfam11749" /db_xref="CDD:152185" gene 1185896..1186495 /locus_tag="B565_1073" /db_xref="GeneID:10486990" CDS 1185896..1186495 /locus_tag="B565_1073" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391725.1" /db_xref="GI:330828773" /db_xref="GeneID:10486990" /translation="MSEFLKRWSSRKSEARKHQVLQPREEAIPEAVAAPIEGSGEGKN PDTSLDSPVVSTDKGSCEPLAVEGAESGEPPLTTAPPGKAKLPDKEALRAMFCSHKPD GLDDYTQDFSQPELLPAALTAGLRNWLVDQVIAPDSESANPASGSVEPVALVSEPAAE PHGLADNHSQTHTDDRDILVSCGGQNVPTKGGGMEPSGS" misc_feature 1185905..1186249 /locus_tag="B565_1073" /note="Protein of unknown function (DUF3306); Region: DUF3306; pfam11748" /db_xref="CDD:192818" gene 1186599..1188365 /locus_tag="B565_1074" /db_xref="GeneID:10486991" CDS 1186599..1188365 /locus_tag="B565_1074" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster-binding protein" /protein_id="YP_004391726.1" /db_xref="GI:330828774" /db_xref="GeneID:10486991" /translation="MSTEQTLPNLSPNLASNLAHGAGAAEHNARARAYALQHTVKTDN LIPATVSYQSQGRLLLVGPEDRIRRAASLLPAGVKPTLLVSEAVHDAEAADLETIFDA TASLAALTLREPGLTGYLGQFQLTGLNGQGERVNLAALCFPQQGFPHQAAAVGEQPRE PRFDLVADLGRAPLFALERPPVGYLHLADDQGLAERLAELCALTGIFDKPRYFRLDPE ACAFTARGVPGCSRCLDVCPTDALKPINGRIQIDPHLCQGFGSCASACPTGAIGYHQP DANTSGDYLLRLLKHYREAGGDAPRLLIAGENERESVEAELTRLPANWLPVWVEESAS LGIESWFAALSYGASAVRIALGDDAPASVRALVERELASAAVLLAGAGLATDRIALFD ADAGEPVSGQTALALLEKPLKGDKRENLFAAFDALWQANEGNREPLAVPHGAPYGSVE LKESDCTLCMGCVAVCPSRALHAVGHAPGLNFIEQDCIQCGMCEKACPEQAIVLTPRL QPVPEARRAVQSLKAEEAACCIRCSKPFAPASMIRRIQQKLAGHSHFQNEAAQRLLMC EDCRVKDVFAALAADPVSQLKV" misc_feature <1187283..1187411 /locus_tag="B565_1074" /note="ferredoxin; Validated; Region: PRK07118" /db_xref="CDD:180852" misc_feature 1187904..1188308 /locus_tag="B565_1074" /note="formate hydrogenlyase complex iron-sulfur subunit; Provisional; Region: PRK12387" /db_xref="CDD:183492" misc_feature <1187958..>1188098 /locus_tag="B565_1074" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" gene 1188373..1188993 /locus_tag="B565_1075" /db_xref="GeneID:10486992" CDS 1188373..1188993 /locus_tag="B565_1075" /codon_start=1 /transl_table=11 /product="TorD family cytoplasmic chaperone" /protein_id="YP_004391727.1" /db_xref="GI:330828775" /db_xref="GeneID:10486992" /translation="MMSEQHNEKVGELTMTELEQSSADLYALLASLWRAAPRGEQLAW LQGLQPMPGPFARGLGLVQLAASSHHENELAEEYQDLFIGLGRGEIVPFASWYLTGSL MELPLAVLRADLQSLGFERQSGVCEPEDHLAALCEVMAVLIGEQHPERNRFYERHLAP WVLACCRDQQQAKGGSFYRAVGALAEDFFKLENELRLPFGACVVPG" misc_feature 1188499..1188876 /locus_tag="B565_1075" /note="Nitrate reductase delta subunit; Region: Nitrate_red_del; cl00958" /db_xref="CDD:186283" gene 1189110..1189313 /locus_tag="B565_1076" /db_xref="GeneID:10486993" CDS 1189110..1189313 /locus_tag="B565_1076" /codon_start=1 /transl_table=11 /product="Tat (Twin-arginine translocation) pathway signal sequence domain-containing protein" /protein_id="YP_004391728.1" /db_xref="GI:330828776" /db_xref="GeneID:10486993" /translation="MSDEQLKDPSRRNLIKGVGVVATIGVLAGATGRVVGKEVLTHDT EPDKGYRETPHVHDFYRTLRGTD" misc_feature 1189110..1189298 /locus_tag="B565_1076" /note="formate dehydrogenase region TAT target; Region: formate_TAT; TIGR02811" /db_xref="CDD:163027" gene 1189337..1192213 /locus_tag="B565_1077" /db_xref="GeneID:10486994" CDS 1189337..1192213 /locus_tag="B565_1077" /codon_start=1 /transl_table=11 /product="formate dehydrogenase alpha chain" /protein_id="YP_004391729.1" /db_xref="GI:330828777" /db_xref="GeneID:10486994" /translation="MKLTKRAEQPQAGEQGNEAIRGQGLTRRAFMVNSGLVAGGAVAA GWLAPAMMQRAEAKTVAAGVPVEVKRTICSHCSVGCGVYAEVQNGVWTGQEPAFDHPF NLGGHCAKGAALREHGHGERRLKYPMKLVGGKWQRISWDQAIEEVGNEVLRLRKESGP DSVYWLGSAKHSNEQAYLFRKMASLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNS LNDMHNSKSIMFIGSNPAEAHPVAMQHILLAKERNGCKILVVDPRRTRTAAKADMYLS LRPGTDVAFIWGMLWHIFKNGWEDKEFIRTRVYGMDEVQKEVARWTPAEVERVTGLNE QQVYGAAKLLADNRPGCVVWCMGGTQHTTGNNNTRAYCILELALGNVGKSGAGTNIFR GHDNVQGATDFGVTSDSLPGYYGLEEGSWKHWARVWDVDYEWIKARFDNKAYNGKLPM NNNGIPVSRWVDGVLENADLIEQGSNIRAMFYWGHAVNSQTRGPEMKKAMQKLDMMVI VDPYPTVASVMNDRTDGVYLLPATTQFETYGSVTATNRSMQWRDKVIEPLFESKVDHE IMYLLSKKLGFADQLFKHIKVENNQPLLEDITREYNRGMWSVGYTGQSPERLKAHQQN WHTFHKTNLKAEGGPVSGEVYGLPWPCWGTPEMKHPGSHILYDTSIPVSEGGGGFRAR FGIEYQGVSLLAEDSWPKGSEVEDGYPEITADLMKQLGWWDELTEAEKKEAEGKNWKT DLSGGIQRVAIKHGFVPYGNAKARCVVWTFPDQVPKHREPLYTPRRDLLADYATWPDS KSLWRLPTQYASVQEKDVSKEFPIILTSGRLVEYEGGGDETRSNPWLAELQQEMFVEM NPADANDVGVRDGQDVWVEGPEGGRVKVKALVTPRVKPGLAFMPFHFGGHFEGKDLRS KYPEGSDPYVLGESVNIVTTYGYDPVTQMQETKVTLCRFRKVGA" misc_feature 1189493..1192201 /locus_tag="B565_1077" /note="formate dehydrogenase, alpha subunit, proteobacterial-type; Region: formate-DH-alph; TIGR01553" /db_xref="CDD:162418" misc_feature 1189544..>1190581 /locus_tag="B565_1077" /note="Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the...; Region: MopB_Formate-Dh-Na-like; cd02752" /db_xref="CDD:73320" misc_feature order(1189553..1189555,1189559..1189564,1189574..1189576, 1189658..1189660,1190054..1190059) /locus_tag="B565_1077" /note="[4Fe-4S] binding site [ion binding]; other site" /db_xref="CDD:73320" misc_feature order(1189664..1189666,1189916..1189918,1189928..1189930, 1190030..1190032,1190036..1190038,1190045..1190050, 1190117..1190125,1190174..1190176,1190180..1190182, 1190399..1190407,1190414..1190419,1190513..1190518) /locus_tag="B565_1077" /note="molybdopterin cofactor binding site; other site" /db_xref="CDD:73320" misc_feature <1190777..1191733 /locus_tag="B565_1077" /note="Molybdopterin-Binding (MopB) domain of the MopB superfamily of proteins, a large, diverse, heterogeneous superfamily of enzymes that, in general, bind molybdopterin as a cofactor. The MopB domain is found in a wide variety of molybdenum- and tungsten-...; Region: Molybdopterin-Binding; cl09928" /db_xref="CDD:158783" misc_feature 1191788..1192201 /locus_tag="B565_1077" /note="Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the...; Region: MopB_CT_Formate-Dh-Na-like; cd02792" /db_xref="CDD:30324" misc_feature order(1191812..1191826,1191830..1191841,1192037..1192039, 1192124..1192126,1192172..1192177) /locus_tag="B565_1077" /note="molybdopterin cofactor binding site; other site" /db_xref="CDD:30324" gene 1192218..1192877 /locus_tag="B565_1078" /db_xref="GeneID:10486995" CDS 1192218..1192877 /locus_tag="B565_1078" /codon_start=1 /transl_table=11 /product="formate dehydrogenase iron-sulfur subunit" /protein_id="YP_004391730.1" /db_xref="GI:330828778" /db_xref="GeneID:10486995" /translation="MARMKFMCDTKRCIECNGCVTACKNENDDALEWGIQRRRVVTLN DGLPGETSISVACMHCTDAPCMAVCPADCFYHTDDGIVLHNKDLCIGCGYCLFACPFG APQFPKTAAFGDRGKMDKCTFCAGGPEEDHSEAERQKYGANRIAEGKLPMCAELCSTK ALLAGDAQVISDIFRERVAYRGAPHAAWGADEQALYRDASKPHDGRGKGLKLGKQEDG Q" misc_feature 1192218..1192772 /locus_tag="B565_1078" /note="Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion]; Region: HybA; COG0437" /db_xref="CDD:30786" gene 1192874..1193845 /locus_tag="B565_1079" /db_xref="GeneID:10486996" CDS 1192874..1193845 /locus_tag="B565_1079" /codon_start=1 /transl_table=11 /product="formate dehydrogenase, cytochrome b556 subunit" /protein_id="YP_004391731.1" /db_xref="GI:330828779" /db_xref="GeneID:10486996" /translation="MRHWLTALLTALLLFSAPGFADAQKEAVGFAGADYWRAVKDGQE GVTTSRSPEHGVLISVPGQLWFEVKTKWVSPLGAIAIFGSLAMCGLMYLVVGQTKLSK PRTGRKLKRWSRLDRALHWTTAAMFLTLSGSGLAIIYGKYFIKPVVSLGVWENWIWFA KVFHNYVGPLFFLCLMGVLIKWFRHNIVNMVDVQWFMKFGGMLGKHKGSHPSAGFSNG GEKAIFWLLIWFGGIVVATGLFLDFPIFGQLRRQMEWASFIHIVGALILICGFIFHIY MGLFQLEGALEGMVTGEVDETWAKEHHDLWYEEVKHTLDEPKAGKSS" misc_feature 1193195..1193806 /locus_tag="B565_1079" /note="Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria...; Region: Cytochrome_b_N; cl00859" /db_xref="CDD:186225" gene 1194006..1194416 /locus_tag="B565_1080" /db_xref="GeneID:10486997" CDS 1194006..1194416 /locus_tag="B565_1080" /codon_start=1 /transl_table=11 /product="putative Gifsy-1 prophage protein" /protein_id="YP_004391732.1" /db_xref="GI:330828780" /db_xref="GeneID:10486997" /translation="MMRKAWLAAVCASALFGGIAGVAQAADGIKTQQVQFKKGESGAT INGTIQGSQTLDYKLTANKGQSMVVILTGKPYFNILPPGSKGEAMFIGSTEGNNFEAT LPAKGTYTIRVYQMGAAESSKAKTPFKLEVGISG" gene complement(1194504..1195268) /locus_tag="B565_1081" /db_xref="GeneID:10486998" CDS complement(1194504..1195268) /locus_tag="B565_1081" /codon_start=1 /transl_table=11 /product="ABC transporter periplasmic substrate-binding protein-like protein" /protein_id="YP_004391733.1" /db_xref="GI:330828781" /db_xref="GeneID:10486998" /translation="MRLIPLLALWLFLTCQSALAAPGRVLNIIVGEWPPFVSEQSKQH GPVAHLISDLFKEAGYQVKFHFAPWGRVYSLAANSQLYDATAVWMHKTEREQDFLFSE AVLQEQFVFFSLKSRQLQAERLEQIIGMRLGGDIAYSYGPELDKMVADGRVTQQKVTD VKQNFGKLLRGRIDLYPQELRVGLAELQSQLDPASAALITHSQTPFLRNDSFVMFPRK MPDSAKLRDQFNQQLQQAIASGRYQRYFERLARGEY" misc_feature complement(1194525..1195187) /locus_tag="B565_1081" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature complement(1194525..1195163) /locus_tag="B565_1081" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature complement(order(1194732..1194734,1194852..1194854, 1194987..1194989,1195062..1195064)) /locus_tag="B565_1081" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature complement(order(1194753..1194755,1194771..1194773, 1194783..1194785)) /locus_tag="B565_1081" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature complement(1194624..1194641) /locus_tag="B565_1081" /note="hinge residues; other site" /db_xref="CDD:29040" gene 1195541..1197256 /locus_tag="B565_1082" /db_xref="GeneID:10486999" CDS 1195541..1197256 /locus_tag="B565_1082" /codon_start=1 /transl_table=11 /product="Malic enzyme aka malate dehydrogenase" /protein_id="YP_004391734.1" /db_xref="GI:330828782" /db_xref="GeneID:10486999" /translation="MATGQYLLWKDAQGQDFRPVALTGTDLLNNRYLNKGTAFTEQER ADFDLDGLLPPQVQTFEAQLERVYEGFKSACSDIEKYQNLRALQDRNETLFYALLSRH VEEMTPYIYTPTVGKACQEFSHRFQKPRGLYITPDNVDDMGSQARHFDAKSIRIIVVT DSQGILGIGDQGVGGMGIPIGKLALYTLGAGIHPACCMPIALDVGTDNQKLLDDPMYL GRPHKRIRGKEYEEFIDKFVQGVKRHFPNAVLQWEDFSKSNAFNNLARYQQALPSFND DIQGTGAVVLAGIIGAVKVKGESLGQQNYLVYGAGAGGVGVADQICAGMIREGMDPQA ARDRIYILDTQGLVCDNRDGLDEYKRRYAKPGLLLAGWDTEVPGKANLADVLRHVPIT VLLGTSGSGGAFQEEHIQLMLQHCERPMVFPLSNPTANCEALPEDIYRWSKGKAIVAT GSPFKDVSYEGQDFRVGQGNNVFIFPGVGLAAIVSQLREITPDVFTTAAFALAECVSE VDLAKGAVYPRICELRSISVHVATAVLKDIVRRDPSHPLIGQDLQQHILNHMWEPVYL PYRRV" misc_feature 1195565..1197253 /locus_tag="B565_1082" /note="malate dehydrogenase; Provisional; Region: PRK13529" /db_xref="CDD:184116" misc_feature 1195802..1196344 /locus_tag="B565_1082" /note="Malic enzyme, N-terminal domain; Region: malic; pfam00390" /db_xref="CDD:144108" misc_feature 1196372..1197229 /locus_tag="B565_1082" /note="NAD(P) binding domain of malic enzyme (ME), subgroup 1; Region: NAD_bind_1_malic_enz; cd05312" /db_xref="CDD:133454" misc_feature order(1196468..1196479,1196567..1196572,1196732..1196737, 1196810..1196818,1196891..1196893,1196945..1196947, 1196951..1196953) /locus_tag="B565_1082" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:133454" gene complement(1197344..1197682) /locus_tag="B565_1083" /db_xref="GeneID:10487000" CDS complement(1197344..1197682) /locus_tag="B565_1083" /codon_start=1 /transl_table=11 /product="17 kDa antigen" /protein_id="YP_004391735.1" /db_xref="GI:330828783" /db_xref="GeneID:10487000" /translation="MRYLLPLLLLGLTGCATVDTPPLYHQMDKADVQLANQALAKALE TRTKGQSLTWFNPANRHSGSVTPLRTFRHTSGEWCRDYREQLNIGKASQQWQDTACRN QQGRWRPLRT" misc_feature complement(1197353..>1197607) /locus_tag="B565_1083" /note="Surface antigen [Cell envelope biogenesis, outer membrane]; Region: LipA; COG4520" /db_xref="CDD:34175" gene complement(1197682..1198800) /locus_tag="B565_1084" /db_xref="GeneID:10487001" CDS complement(1197682..1198800) /locus_tag="B565_1084" /codon_start=1 /transl_table=11 /product="intein-containing protein" /protein_id="YP_004391736.1" /db_xref="GI:330828784" /db_xref="GeneID:10487001" /translation="MSQPPFKASQRRLLIGSAIALALFANPFSYDFAHNEWQMNQAYA KSCFIAGTRITMADGSTRPIETLRVGEQVLDQHGGSNRILAIERVILGKRRLYGINHL LPFFTAEHPLLTTRGWAAISPAMTRTENPQLAVLPLFTGMQIMCRPAPAMVTGNLALQ PQPELLLVESLCWIEAPPTTALFNLLLDGSHSYIANELIVHNKDGDGGSSGGGDSGGG SNSGGGSNSGGGSNSGGGSDSGGGSDSGGGSDSGGGSDSDGGSDDSGGQGEHAGGEQH GGGERHAGGEKHAGGERHGGGRGFGNGVDDNGVDAIDANGNKLRGDGTVDDNGVDAVD ANGNKLRGDGTVDDRQQVLTDEQERALLNNGFRQQGQP" misc_feature complement(<1198450..1198662) /locus_tag="B565_1084" /note="Hedgehog/Intein domain, found in Hedgehog proteins as well as proteins which contain inteins and undergo protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In protein splicing an intervening polypeptide sequence - the intein - is excised from a...; Region: Hint; cl12032" /db_xref="CDD:196309" gene 1199106..1200344 /locus_tag="B565_1085" /db_xref="GeneID:10487002" CDS 1199106..1200344 /locus_tag="B565_1085" /codon_start=1 /transl_table=11 /product="Uracil permease" /protein_id="YP_004391737.1" /db_xref="GI:330828785" /db_xref="GeneID:10487002" /translation="MFSLVKQSVAGLQILFVAFGAMVLVPLLTGLNPSMALLGAGVGT LLFQLCTRRQVPIFLGSSFAFIAPIIYATQTWGLPSTMFGLFAAGFMYFILAALIRAK GMGFVHKLLPPVVIGPVIMVIGLSVAQVACNMAMGRAGSEQVVPAGTALTLAGISLAV TLIAAVFCKGWIKLIPILCGVIAGYVSAVFMGQVSFDGMVNAPWLALPHFETPEINWA AALFMLPVAIAPCIEHIGGVLAIGGVTGKDYTKDPGLHRTLAGDGIGVCFAGFIGGPP VTTYAEVTGAVMITRNFNPVTMTWAAVFAIILAFFGKFNALLTSIPMPVMGGIMLLLF GSIAAIGLKTLVESKVDLGLSRNIAIVAVTLTVGVGALEMKIGDFALAGVGLASVAAI LLNLILPAHSEEGVMDAAKD" misc_feature 1199109..1200242 /locus_tag="B565_1085" /note="Sulfate transporter family; Region: Sulfate_transp; cl00967" /db_xref="CDD:193990" misc_feature 1199121..1200215 /locus_tag="B565_1085" /note="Permease family; Region: Xan_ur_permease; pfam00860" /db_xref="CDD:189745" gene 1200869..1201627 /locus_tag="B565_1086" /db_xref="GeneID:10487003" CDS 1200869..1201627 /locus_tag="B565_1086" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter/signal transduction systems periplasmic component-like protein" /protein_id="YP_004391738.1" /db_xref="GI:330828786" /db_xref="GeneID:10487003" /translation="MNGKQSEVAMNYQLLWKSAIFSVSSMMAITAVQAAPLNVMTEDY PPFNMQGEGGKIVGLSTEVVEELFKRAGVEYKLTLMPWKRAYEDTLGTPNTALYSTTR TPEREALFKWVGPLVNNNWVFFSSSTANITVKSLEDAKQYSVGGYNGDAAAEYLKAQG FAKLQLAANDTANVKKLEAGRIDLWATGQYLAPYLASKEKVASPKPVFVFKETQMSLA FNKDTPDELITKLNEILAAMKADGTIDKINAKYQ" misc_feature 1200986..1201621 /locus_tag="B565_1086" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature 1200995..1201621 /locus_tag="B565_1086" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature order(1200998..1201000,1201112..1201114,1201184..1201186, 1201319..1201321,1201430..1201432) /locus_tag="B565_1086" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(1201379..1201381,1201391..1201393,1201409..1201411) /locus_tag="B565_1086" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 1201499..1201516 /locus_tag="B565_1086" /note="hinge residues; other site" /db_xref="CDD:29040" gene 1201692..1203218 /locus_tag="B565_1087" /db_xref="GeneID:10487004" CDS 1201692..1203218 /locus_tag="B565_1087" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis transducer" /protein_id="YP_004391739.1" /db_xref="GI:330828787" /db_xref="GeneID:10487004" /translation="MDWKSLTFRIAVLTSLSVSLLLVLFGGYNYHAVKAESYSKQSAL VEQAIGRLQLSLPGPLWNYESAFIEASLKSELAADILSALLVVNKDKLVAGFARDTAG SIAPVTAMPADVSAYGGYDLVYDDSGQKNTVARLLVQTSDAAIQAQLRQQLITTVWQI LVLDLCIIALLMVLIHRNVLRPLHQMNQAVFDLAKGEGDLTRRLKISRQDEMGALATN INHFIAKLQEMVAEINELSAGVLQTAELCDSLSADTRVGSDAQQSELDQVATAITEMS QAVQEVAGNAVKTSGATDEANLYVEQGYNLAGHANEAIHQLVGEVERVATLMRTLSTE SSSIGTIIEVINGIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRTLSGRTRQSTE EISASIKRLQQATQNVGAGMQQSQEKASRAGIEAADVQTSVEKIKNQVSLIREMNMYI AQASEEQHSVAEAVSHSVNRIATLNSESAARVAQVAEASSDLRQLSAQLDTLLKQFRV " misc_feature 1202169..1202375 /locus_tag="B565_1087" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 1202436..1203212 /locus_tag="B565_1087" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 1202613..1203215 /locus_tag="B565_1087" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 1203674..1204390 /locus_tag="B565_1088" /db_xref="GeneID:10487005" CDS 1203674..1204390 /locus_tag="B565_1088" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_004391740.1" /db_xref="GI:330828788" /db_xref="GeneID:10487005" /translation="MIFCADKDNLQSARVVRLSSAESLIFSYLLDHHDEVCDKDLLLE IGWLGRPISPNSLNVAIANIRRHFASSPQTLDIRSTPKKGYSLHLNCKMKSYYGKALP TESEPLPEPMSEPTPAAAAQPPSTPSSSDHEVIKDPAAAAPRSFGERAKLAFLSGIGR PMLARGLMYVNLLLAVLVAFVASYLHFEWLHVHCTDAPTGVVCQMEARSDPPVKPASL VLVSGHQVRVLSYKELEKTL" misc_feature 1203701..>1203937 /locus_tag="B565_1088" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cl00209" /db_xref="CDD:193709" gene 1204401..1204919 /locus_tag="B565_1089" /db_xref="GeneID:10487006" CDS 1204401..1204919 /locus_tag="B565_1089" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="YP_004391741.1" /db_xref="GI:330828789" /db_xref="GeneID:10487006" /translation="MKRTLKNTLLLLPLLVVLLFVVGMFINSLGCHYDLKMSANGVNY HGVCRWGKITVIEEEEATREKWRVTGFQLTFFNQLVYLIDSRTQLHESGNDDSYLNEY NLIQSQYALVNYAWVPLTENKVAIFQRDPVHEVVIAQRDGWFDLYRWFFPPAPLVPVQ PQSAGAGRPASF" gene complement(1204909..1205328) /locus_tag="B565_1090" /db_xref="GeneID:10487007" CDS complement(1204909..1205328) /locus_tag="B565_1090" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004391742.1" /db_xref="GI:330828790" /db_xref="GeneID:10487007" /translation="MIRLMEEHDIPQLARLFLKSRRHTFHWVDPARFQLEDFEEQTKG ERVWVAEQGGNICGFIAIWQPDHFVHHLYVSSDWHGQGIGRALLERGLADSPHGSLKV ATRNTAAVAFYHRLGWQNSDETGHCEVTGPWCKLLRS" misc_feature complement(<1205050..1205190) /locus_tag="B565_1090" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cd04301" /db_xref="CDD:173926" misc_feature complement(1204936..>1205115) /locus_tag="B565_1090" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" misc_feature complement(order(1205074..1205079,1205107..1205115)) /locus_tag="B565_1090" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene 1205489..1205989 /locus_tag="B565_1091" /db_xref="GeneID:10487008" CDS 1205489..1205989 /locus_tag="B565_1091" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391743.1" /db_xref="GI:330828791" /db_xref="GeneID:10487008" /translation="MDNKLIEGNIFVPAHIDDVWHAWTTESGLRSFLAPECLMVAEPN GPFEIYFRPDAPLGERGSEGCRVMAVMPYDLLSFSWNFPPSLPHIRQQKTQVCLRFVP EGQGTRLYFLQSGWANDPDWDQGYAYFREEWLETSLPRLQYRFTHGPIDWNNPPDKAQ LKALAQ" misc_feature 1205504..1205914 /locus_tag="B565_1091" /note="Putative hydrophobic ligand-binding SRPBCC domain of Micromonospora echinospora CalC, human Aha1, and related proteins; Region: SRPBCC_CalC_Aha1-like; cd07814" /db_xref="CDD:176856" misc_feature order(1205504..1205506,1205510..1205512,1205516..1205518, 1205543..1205551,1205555..1205560,1205573..1205575, 1205597..1205599,1205621..1205623,1205627..1205629, 1205633..1205635,1205639..1205641,1205672..1205674, 1205678..1205683,1205687..1205689,1205696..1205698, 1205714..1205716,1205720..1205725,1205771..1205776, 1205780..1205782,1205786..1205788,1205816..1205818, 1205822..1205824,1205828..1205830,1205834..1205836, 1205861..1205887,1205894..1205902,1205909..1205911) /locus_tag="B565_1091" /note="putative hydrophobic ligand binding site [chemical binding]; other site" /db_xref="CDD:176856" gene complement(1206195..1207163) /locus_tag="B565_1092" /db_xref="GeneID:10487009" CDS complement(1206195..1207163) /locus_tag="B565_1092" /codon_start=1 /transl_table=11 /product="glucokinase Glk" /protein_id="YP_004391744.1" /db_xref="GI:330828792" /db_xref="GeneID:10487009" /translation="MQHTHALVGDVGGTNARLALCELATGTISQAKTYSGLAHPSLEA VVRLYLEEHKVQVAEACIAIACPINGDWVAMTNHSWEFSISEMQSNLGLARLQVINDF TAVSMAVPVLAESDRIQLGGAAPVAGKPIAIYGAGTGLGVAHLVKAGEQWLSLPGEGG HVDFAANTEEEDAVLQVMRGELGHVSAERFLSGPGLVNLYRGLVKSDGREPEPFAPKD ITERALAGECLDCRRTLSLFCVLMGRFAGNLALNMGTFGGVYIAGGIVPRFQEFFTGS GFRVAFEDKGRFKSYLKEIPVFLITHEGPGLLGAGAYLRQSMGITI" misc_feature complement(1206213..1207157) /locus_tag="B565_1092" /note="FGGY family of carbohydrate kinases, N-terminal domain; Region: FGGY_N; cl09121" /db_xref="CDD:195797" gene 1207505..1208368 /locus_tag="B565_1093" /db_xref="GeneID:10487010" CDS 1207505..1208368 /locus_tag="B565_1093" /codon_start=1 /transl_table=11 /product="HTH-type transcriptional regulator HexR" /protein_id="YP_004391745.1" /db_xref="GI:330828793" /db_xref="GeneID:10487010" /translation="MVMMNTLDKITNNLESFSKSERKVAEVILASPQTAIHSSIAALA KMADVSEPTVNRFCRRLDTKGFPDFKLHLAQSLANGTPYVNRHVEAEDGPDTYTAKIF ESTMACLDAAKNSLDISAINRCVDILTQSKKISFFGLGASSAVARDAQNKFFRFNIPV VSFDDIVMMRMSCINSSEGDVVVLISHTGRTKALVEIAALARENDATVIGMTAKDSPL ARECNLVLSMDVPEDTDVYMPMASRIAQLALVDVLATGFTLRRGMKFRENLKKVKEGL RESRFETPHSS" misc_feature 1207514..1208359 /locus_tag="B565_1093" /note="DNA-binding transcriptional regulator HexR; Provisional; Region: PRK11302" /db_xref="CDD:183082" misc_feature 1207859..1208272 /locus_tag="B565_1093" /note="RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose...; Region: SIS_RpiR; cd05013" /db_xref="CDD:88408" misc_feature order(1207928..1207930,1208060..1208062) /locus_tag="B565_1093" /note="putative active site [active]" /db_xref="CDD:88408" gene 1208532..1209971 /locus_tag="B565_1094" /db_xref="GeneID:10487011" CDS 1208532..1209971 /locus_tag="B565_1094" /codon_start=1 /transl_table=11 /product="pyruvate kinase II" /protein_id="YP_004391746.1" /db_xref="GI:330828794" /db_xref="GeneID:10487011" /translation="MPRRTKIVTTLGPATDREGILEGIIRAGADMVRMNFSHGTAEDH ILRANQVRDIAAKLGRHVAIMGDLQGPKIRVSTFKDGKIYLAIGDKFILDAALGKGEG CQEQVGIDYKSLPDDVVQGDILLLDDGRVQLKVEQVEGTRIHTTVTVAGPLSNNKGIN KKGGGLSAPALTEKDKEDIKTAARMNVDYLAVSFPRCGDDLRYARELAREAGSNAKIV AKVERAETVATDEAMEDIILGSDAVMVARGDLGVEIGDPELVGVQKKLIRHSRRLNRV VITATQMMESMINAPLPTRAEVMDVANAVLDGTDAVMLSAETAAGQFPIETVTSMASV CVGAEKHPSLNVSNHRMSYTFTSVEEAVAMSTMYAANHLEGVKAIVALTESGTTPLLM SRISSGLPIFAMSPHNKTLAWTNLYRGVTPVMFDGDETKPVYEVCRDALAVLKDKGLL QSGDMVLLTHGDKMETVGSTNTCKVMMVE" misc_feature 1208532..1209935 /locus_tag="B565_1094" /note="pyruvate kinase; Provisional; Region: PRK05826" /db_xref="CDD:180277" misc_feature 1208538..1209965 /locus_tag="B565_1094" /note="Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors. Like other allosteric enzymes, PK has a high substrate affinity R state and a low...; Region: Pyruvate_Kinase; cl09155" /db_xref="CDD:195807" misc_feature order(1208541..1208546,1208712..1208714,1208718..1208720, 1208742..1208753,1209006..1209011,1209027..1209029, 1209036..1209050,1209093..1209095,1209117..1209119, 1209138..1209140,1209171..1209173,1209288..1209290, 1209342..1209347,1209357..1209359,1209453..1209455, 1209459..1209461,1209546..1209548,1209552..1209557, 1209711..1209713,1209717..1209719,1209723..1209725, 1209756..1209758,1209765..1209770,1209774..1209776, 1209780..1209788) /locus_tag="B565_1094" /note="domain interfaces; other site" /db_xref="CDD:29370" misc_feature order(1208628..1208630,1208634..1208636,1208730..1208732, 1209111..1209113,1209189..1209191,1209195..1209197, 1209276..1209278,1209372..1209374) /locus_tag="B565_1094" /note="active site" /db_xref="CDD:29370" gene 1210185..1210970 /locus_tag="B565_1095" /db_xref="GeneID:10487012" CDS 1210185..1210970 /locus_tag="B565_1095" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391747.1" /db_xref="GI:330828795" /db_xref="GeneID:10487012" /translation="MNKRNWLLALSLSLAFSPCYADWAKLKAAASDLGAAVSETSKEV WQDVSDFSKKSWASISAWGEDAFNTAGVWTDKSIATGKEWLKAADKELNEMLNPKTAK EARIALNTMADTALIRLFNEQPSAKLLFDKAYGYAVFDSRKFSLMLHTNQGAGVAVNR KTGKHTYMKMFGAGLAAGIGGKFYQQVILFEDKARFDAFVTQGWEATSEVGVVAGKES AELTAKYNGGMAIYQIGEKGLLLDANISGSKYWIDKDLTETSR" misc_feature 1210479..1210955 /locus_tag="B565_1095" /note="Family of unknown function (DUF500); Region: DUF500; cl01109" /db_xref="CDD:194038" gene complement(1211027..1212778) /locus_tag="B565_1096" /db_xref="GeneID:10487013" CDS complement(1211027..1212778) /locus_tag="B565_1096" /codon_start=1 /transl_table=11 /product="amidohydrolase family protein" /protein_id="YP_004391748.1" /db_xref="GI:330828796" /db_xref="GeneID:10487013" /translation="MNIKTLFLASLLVTLPAAANAQSQSQTLIFGGTIYSGDPANPHP EAVGIEGKKIVAVGSYQEVSARLGSHAKRLDLKGKYLMPGLIDSHVHAAFAGFQGMTV NFPDAMSEVEQVQQFLTRSKDDPRLTQGDVELYSNVSLDYWHQLPLLDQVFNGPQYQQ IPVVLAGSDAHTGWANQAMLRKAGIDADTLAGRYAPLKGNFGLTPSGKLNGFASEGGW DAILKALPPVSDETIASAIMTAAKQLNQVGITAWMDPISNIRPLAPIFNAEPDRRDTG LLPAYSMLSREGKLTGHVSALALVGIHASPAIIDDVLALQQQFQDAPDVKLVGIKILQ DGVIEYPSQTAKLSEPYLNRPGYSGKDDLDKQRFNELIRTADAHQLIAHFHAIGDRAV RESLDAIAYARAHNRDHRLLHSITHLEVVSPASIARFKPLNVAASMQLLWAGKNVATT LLLDGKVPPALLARLYPAGSLLQSGAIIAGASDWPVSSPNPFLAMYTAITRQGELGLL PPASEQISRQAILQAYTLNAAKVIGREKEIGSISAGKSADLILLDRNLEQVASEELKE TKVLWTMFKGKQVYSTH" misc_feature complement(1211036..1212700) /locus_tag="B565_1096" /note="Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]; Region: COG1574" /db_xref="CDD:31762" misc_feature complement(1211126..1212643) /locus_tag="B565_1096" /note="YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling; Region: YtcJ_like; cd01300" /db_xref="CDD:30043" misc_feature complement(order(1211330..1211332,1211528..1211530, 1211624..1211626,1212506..1212508,1212512..1212514)) /locus_tag="B565_1096" /note="active site" /db_xref="CDD:30043" misc_feature complement(1211042..>1211200) /locus_tag="B565_1096" /note="Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have...; Region: metallo-dependent_hydrolases; cl00281" /db_xref="CDD:193747" gene complement(1212845..1213756) /locus_tag="B565_1097" /db_xref="GeneID:10487014" CDS complement(1212845..1213756) /locus_tag="B565_1097" /codon_start=1 /transl_table=11 /product="AraC family transcriptional regulator" /protein_id="YP_004391749.1" /db_xref="GI:330828797" /db_xref="GeneID:10487014" /translation="MLAGKESALDYRKPVFKAMDYISHHLDDNPGLDEVAAAAAISTF HFHRIFKTMVGETIAGFTRRLRMERAARRLLASPQSDITTLALAAGFSSSQNFAKAFR LHFAMSPSEYRQQQGGNWKSKIGNDPLPFDTYDGLVMHPVTEHPGLLQGASVRLMPAR RVAYMRRLGPYGKETCEQAHRDLLALFASDEAMTPAGTLSLYWDIPDITDETRCRTDV CIELGPEILAGRQLTTQTIAAGPYAVCQFIARGDQLVACWETAFRWVVSQGLNCDDRP CYEQYHAGTDSDRDHYVFDICIPLINR" misc_feature complement(1213409..1213708) /locus_tag="B565_1097" /note="AraC-type DNA-binding domain-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:32389" misc_feature complement(1213415..>1213513) /locus_tag="B565_1097" /note="Bacterial regulatory helix-turn-helix proteins, AraC family; Region: HTH_AraC; pfam00165" /db_xref="CDD:143933" misc_feature complement(1212857..1213288) /locus_tag="B565_1097" /note="Bacterial transcription activator, effector binding domain; Region: AraC_E_bind; cl01368" /db_xref="CDD:194113" gene 1213935..1214228 /locus_tag="B565_1098" /db_xref="GeneID:10487015" CDS 1213935..1214228 /locus_tag="B565_1098" /codon_start=1 /transl_table=11 /product="flagellar hook-basal body protein" /protein_id="YP_004391750.1" /db_xref="GI:330828798" /db_xref="GeneID:10487015" /translation="MQEMQALKIEAGATPLAQPGRQVTSDFGLLLQQALGNVNELQGA ANDLRTRFDMGDKSVDLAEVMIAGQKSSIAFEATVQVRNKMVDAYKTIMNMPV" misc_feature 1213935..1214225 /locus_tag="B565_1098" /note="Flagellar hook-basal body complex protein FliE; Region: FliE; cl09139" /db_xref="CDD:195803" gene 1214291..1216000 /locus_tag="B565_1099" /db_xref="GeneID:10487016" CDS 1214291..1216000 /locus_tag="B565_1099" /codon_start=1 /transl_table=11 /product="flagellar M-ring protein FliF" /protein_id="YP_004391751.1" /db_xref="GI:330828799" /db_xref="GeneID:10487016" /translation="MATDQNGDLLINDEGTAALDENEQKSSALGFLSNTDVLRQITLI LGLAICLAIAVFILLWGKEPDMRPLGTYTTQELVKTLDFLDQQKIPYEVDGKSVLVNA ESYPTIQLALTRAGLANATDSNIGGEDILLKDSSFGVSQRMESERLKLSRERQLASAI EQFQNVAKAQVLLAIPKDNVFARNERKPSATVVLNLKGAALGQGEVDSIVDMVASAVH GLEPTRVTVTDQNGRLLNSGSQDPISAQTRKEFAMQQKQELEYKQKIDAILIPVLGAD NYTAEVDLSLDFSQQEQTRKTYNPDLPAVRSEMTMEENSASGSNGGVPGALSNQPPAA SNIPEEATGGDGASAAASGRSRKEATRNFELDTTVSHTRRQMGGIRRMTVSVAVDYKA VPGADGAVTREARTQAELDTLRRLLSGGLGFDVTRGDTLEVVAIPFNRPELDTVAEVP LYDQPWFWRAVRIAASVLVIIVLIVTVVRPMLKRLLYPDAKPEGEVDFDNHTVLGGDD ELSLLSAQVENDQVFGVRDGQLKLPDLHRDEDLLKAVRALVANEPDLAAQVIKEWVTN KDA" misc_feature 1214348..1215988 /locus_tag="B565_1099" /note="flagellar MS-ring protein; Reviewed; Region: fliF; PRK06007" /db_xref="CDD:180348" misc_feature 1214453..1215016 /locus_tag="B565_1099" /note="Secretory protein of YscJ/FliF family; Region: YscJ_FliF; cl01907" /db_xref="CDD:186494" misc_feature 1215095..1215604 /locus_tag="B565_1099" /note="Flagellar M-ring protein C-terminal; Region: YscJ_FliF_C; pfam08345" /db_xref="CDD:192009" gene 1215993..1217054 /locus_tag="B565_1100" /db_xref="GeneID:10487017" CDS 1215993..1217054 /locus_tag="B565_1100" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliG" /protein_id="YP_004391752.1" /db_xref="GI:330828800" /db_xref="GeneID:10487017" /translation="MPEEKKSQVTGNDITDSQRQILDQMSGMEMAAVLMLSLNEEDAA QIFRHLEPKQVQRLGMSMASMSDFSHDRVAAVHRQFIDDIQKYTNIGIGSEDFVRKAL VAALGEDKASNLVDQIILGSGARGLDSLKWMDARQVASIIQNEHPQIQTIVLSYLEPE QSAEILSQFPEQVRLDLVMRIANLEEVQPAALQELNDIMEKQFAGAAGAQAAKMGGLK AAANIMNYLDTNIEGQLMDSIRESDEEMSQQIQDLMFVFENLIDVDDRGIQTMLREVP GDLLQRALKGSDDQMREKIFKNMSKRAAEMLADDLEAMGPIRVSEVEAAQKEILSIAR RLADAGEIMLGAGGGEEFL" misc_feature 1216035..1217048 /locus_tag="B565_1100" /note="flagellar motor switch protein G; Validated; Region: fliG; PRK05686" /db_xref="CDD:180201" misc_feature 1216698..1217027 /locus_tag="B565_1100" /note="FliG C-terminal domain; Region: FliG_C; pfam01706" /db_xref="CDD:190075" gene 1217123..1217947 /locus_tag="B565_1101" /db_xref="GeneID:10487018" CDS 1217123..1217947 /locus_tag="B565_1101" /codon_start=1 /transl_table=11 /product="flagellar assembly protein FliH" /protein_id="YP_004391753.1" /db_xref="GI:330828801" /db_xref="GeneID:10487018" /translation="MNNKLRGYVRPEGDDARVETWGWPEMEVEVEAGAPTNALGLAPD WYQQEEEVVEPEPEQEPTPSITAEELEAIRQAAWEEGMAEGRESGYAKGMEEGKLEGL QQGHSAGLEQGREEGLAMGRELVEQEIAHWQGLAARLANPLNELDQAVEQQLVSLVMQ LARALIRHEAETSPRILLEALKEGLALLPAAEQGVTLMLHPDDIARIEQAFGAEECAK RHWRLQSDPTLSPGDLQLATELSSIDLTLSGRIDQLLRNFLRDNASQKPASQDSRP" misc_feature 1217306..1217857 /locus_tag="B565_1101" /note="type III secretion apparatus protein, HrpE/YscL family; Region: HrpE_YscL_not; TIGR02499" /db_xref="CDD:162889" misc_feature 1217363..1217479 /locus_tag="B565_1101" /note="Essential protein Yae1, N terminal; Region: Yae1_N; pfam09811" /db_xref="CDD:192391" misc_feature 1217498..1217884 /locus_tag="B565_1101" /note="Flagellar assembly protein FliH; Region: FliH; pfam02108" /db_xref="CDD:111047" gene 1218000..1219331 /locus_tag="B565_1102" /db_xref="GeneID:10487019" CDS 1218000..1219331 /locus_tag="B565_1102" /codon_start=1 /transl_table=11 /product="flagellar protein export ATPase FliI" /protein_id="YP_004391754.1" /db_xref="GI:330828802" /db_xref="GeneID:10487019" /translation="MSGSLLNRLQGYKVRDSAPKPPVAGKLTRVVGLTLEAIGCRAAI GALCRIDTLDGTLEAEVVGFSGDRLYLMPSEQLKGVIPGARVVPITEEHGIPVGMNLL GRVIDGIGQPLDGLGPILSSQTVQFAQHRINPLSRRPIHQPMDVGVRAINAVLTVGQG QRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREVKEFIEDILGEEGRARSV VVAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTRYAQAQREIALAVGEP PATKGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQDPIADAARAILDG HIVLSRELADAGHYPAIDIEKSISRVMPMVTSPEHMDLARTLKQFYSLYQQNRDLITI GAYSQGSDPRIDRAIIQKPYLDQFLQQGMREVIHYDDGLQALQMVAMPLMR" misc_feature 1218000..1219325 /locus_tag="B565_1102" /note="flagellum-specific ATP synthase; Validated; Region: fliI; PRK08972" /db_xref="CDD:181599" misc_feature 1218276..1219256 /locus_tag="B565_1102" /note="Flagellum-specific ATPase/type III secretory pathway virulence-related protein. This group of ATPases are responsible for the export of flagellum and virulence-related proteins. The bacterial flagellar motor is similar to the F0F1-ATPase, in that they...; Region: ATPase_flagellum-secretory_path_III; cd01136" /db_xref="CDD:30002" misc_feature 1218501..1218521 /locus_tag="B565_1102" /note="Walker A motif/ATP binding site; other site" /db_xref="CDD:30002" misc_feature 1218756..1218770 /locus_tag="B565_1102" /note="Walker B motif; other site" /db_xref="CDD:30002" gene 1219359..1219799 /locus_tag="B565_1103" /db_xref="GeneID:10487020" CDS 1219359..1219799 /locus_tag="B565_1103" /codon_start=1 /transl_table=11 /product="flagellar protein FliJ" /protein_id="YP_004391755.1" /db_xref="GI:330828803" /db_xref="GeneID:10487020" /translation="MSKGLVLLADRLVEAEQQCALALVKAQQDLKLFMDQQNALNQYR QIYHQQWTDRGLQGISPQQNTQYHAFINKLEQAATQQYEGVLQVRQALEQRREEWLAA QQRRKAVELLLEKQASREQQKAQRQEQKMLDEYAMLRRFHQSGL" misc_feature 1219359..1219784 /locus_tag="B565_1103" /note="Flagellar FliJ protein; Region: FliJ; cl09161" /db_xref="CDD:195810" misc_feature 1219365..1219775 /locus_tag="B565_1103" /note="flagellar export protein FliJ; Region: flagell_FliJ; TIGR02473" /db_xref="CDD:131526" gene 1219867..1221780 /locus_tag="B565_1104" /db_xref="GeneID:10487021" CDS 1219867..1221780 /locus_tag="B565_1104" /codon_start=1 /transl_table=11 /product="putative polar flagellar hook-length control protein FliK" /protein_id="YP_004391756.1" /db_xref="GI:330828804" /db_xref="GeneID:10487021" /translation="MMQTLLTQTPSAAANGLDKAPLNGSVESKSIDGGTGSDSKGDFA TLIAKVRNSEQGAAETTQGGNHARLAKSLATESASPKEETGKEQDPDADNKVEEVPAT DFLLRLQDSLKLDTSLVTPQLAVAAQQSATVVDGNPLPQEGELEGIALDESEQTPAAA RIAQQLAGQTGAQTANSTLDTTVLSSAARVVAQGDASAAVLSSEGEDAATIADGQSGE KAFAKGETLGADGKQTKPLTGAERMAQLAKVLPVDESASTAKSVELLAAKEAGDSKSD LAASNAVTNKGQATQAATQGTALKAFSEGLKQPEAGAATTSATADGSGVAGKGAEKGA AGGSQQQATAANQSSAPVTTAQSAAESAAAQGSVTTNATAQTDSAAAPVMVAPQQVLA QAESQGPQAPLSTISAGIKQMEVTGTDEVRKAVSLEVKPKAGEAEKSLVAATSSGESS PSQTVQHGQNSQTQPQVADSRAPAAETTLRRESQNLPHLKLASQEAPAELHQKVNVML AEKLQQAEIQLDPLGLGKMKIQIQMGADSQANVHFVVQHGQTREMLEQAMPRLRDMLA GQGIQLGQTQVQQQSQQQQQQGQPTFNGQGQQGQSSGQPRSGNGLVEGELTTSNPSLL VESTNGSGIDFYA" misc_feature <1221139..1221564 /locus_tag="B565_1104" /note="Flagellar hook-length control protein [Cell motility and secretion]; Region: FliK; COG3144" /db_xref="CDD:32958" misc_feature 1221370..>1221564 /locus_tag="B565_1104" /note="Flagellar hook-length control protein FliK; Region: Flg_hook; cl14669" /db_xref="CDD:196811" gene 1221838..1222353 /locus_tag="B565_1105" /db_xref="GeneID:10487022" CDS 1221838..1222353 /locus_tag="B565_1105" /codon_start=1 /transl_table=11 /product="flagellar basal body-associated protein FliL" /protein_id="YP_004391757.1" /db_xref="GI:330828805" /db_xref="GeneID:10487022" /translation="MADDNELTLKDPAAGKKKKLIIIIALAVILLGGGGAGAFLMLSG SNKPPVEAAEGAEAAPKEEAPKPSLYVGMPRPFVFNVAGAQRDRLVQIKIQLMVRGTA DETLAKQNIPLIEGTLLRVFSAASAEQLMTFEGKEKLRKDSLEECRRVLKDLVSSPVI EQVLFTGFVMQ" misc_feature <1222039..1222350 /locus_tag="B565_1105" /note="Flagellar basal body-associated protein FliL; Region: FliL; cl00681" /db_xref="CDD:193906" gene 1222361..1223431 /locus_tag="B565_1106" /db_xref="GeneID:10487023" CDS 1222361..1223431 /locus_tag="B565_1106" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliM" /protein_id="YP_004391758.1" /db_xref="GI:330828806" /db_xref="GeneID:10487023" /translation="MSDLLSQDEIDALLHGVDDVEEEEIGGAGDPGVAQFDFSSQDRI VRGRMPTLELVNERFARHMRISLFNMMRRTAEVSINGVQMLKFGEYVHTLFVPTSLNM VRFRPLKGTALITMEARLVFILVENFFGGDGRYHAKIEGREFTPTERRIIQMLLKLVF EDYKDAWAPVMDVGFEYLDSEVNPAMANIVSPTEVIVVSSFHIELDGGGGDFHVAMPY SMLEPIRELLDAGVQSDKGDTDVRWSKALRDEIMDVKVELRAKLLETELTLRELMELR PGDIIPVDMPENLLVFVEDLPTFHAKMGRTKDNVALKITDKLKRPEGVKTEMHLVTRG GVRIDGEAELEELERSIEDQQR" misc_feature 1222361..1223353 /locus_tag="B565_1106" /note="flagellar motor switch protein FliM; Validated; Region: fliM; PRK06666" /db_xref="CDD:180651" misc_feature 1223099..1223323 /locus_tag="B565_1106" /note="Surface presentation of antigens (SPOA); Region: SpoA; cl00819" /db_xref="CDD:186206" gene 1223481..1223873 /locus_tag="B565_1107" /db_xref="GeneID:10487024" CDS 1223481..1223873 /locus_tag="B565_1107" /codon_start=1 /transl_table=11 /product="flagellar motor switch phosphatase FliY" /protein_id="YP_004391759.1" /db_xref="GI:330828807" /db_xref="GeneID:10487024" /translation="MSGTEEEDLMADAWAAALEEQVTAEAKPAPLEELKDDAPISAEE RRKLDTILDIPVTIAMEVGRSQISIRNLLQLNQGSVVELDRVAGEPLDVLVNGTLIAH GEVVVVNDKFGIRLTDVISQIERIKKLK" misc_feature 1223490..1223870 /locus_tag="B565_1107" /note="flagellar motor switch protein; Validated; Region: fliN; PRK05698" /db_xref="CDD:168189" misc_feature 1223496..1223870 /locus_tag="B565_1107" /note="Surface presentation of antigens (SPOA); Region: SpoA; cl00819" /db_xref="CDD:186206" gene 1223870..1224250 /locus_tag="B565_1108" /db_xref="GeneID:10487025" CDS 1223870..1224250 /locus_tag="B565_1108" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein, FliO" /protein_id="YP_004391760.1" /db_xref="GI:330828808" /db_xref="GeneID:10487025" /translation="MMRLLLLLLPVPVFAETAASANVPSLSSWLLSSLMVIGLILVLG FLLKKSKLATAMGGGQMRVIASLPVGYKEKLLVVKVGEQQLLVGVTPQQVNFLYRLEE PLDENQPQAFSQQLGKLMGKHEKS" misc_feature 1224011..1224235 /locus_tag="B565_1108" /note="Flagellar biosynthesis protein, FliO; Region: FliO; cl01247" /db_xref="CDD:194078" gene 1224237..1225010 /locus_tag="B565_1109" /db_xref="GeneID:10487026" CDS 1224237..1225010 /locus_tag="B565_1109" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FliP" /protein_id="YP_004391761.1" /db_xref="GI:330828809" /db_xref="GeneID:10487026" /translation="MKKANGLWLKTGLLVSLLIPLFCSWPALAQDAMSAVTVKTMGDG SQEYSLTLQVLALMTALSFLPAMVIMMTSFTRIIVVLGILRQAIGLQQSPSNQVLIGI ALFMSFFIMSPVLDRINDEALQPYLAETIQAKEALERAELPIHQFMLAQTRIKDLNTF MEIANVQVEKPADVPLRVLIPAFVTSELKTAFQIGFMLFLPFLVIDLVVASILMAMGM MMLSPMIVSLPFKLMLFVMVDGWNLILGSLANSFGLGAG" misc_feature 1224273..1224995 /locus_tag="B565_1109" /note="FliP family; Region: FliP; cl00593" /db_xref="CDD:186095" gene 1225036..1225305 /locus_tag="B565_1110" /db_xref="GeneID:10487027" CDS 1225036..1225305 /locus_tag="B565_1110" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FliQ" /protein_id="YP_004391762.1" /db_xref="GI:330828810" /db_xref="GeneID:10487027" /translation="MSPETFVDVFREALWLVNIMVSAVILPSLAIGLVVAIFQAATSI NEQTLSFLPRLIVTLLALGIGAHWGMQSLMDFFILMVNQIPEVVG" misc_feature 1225036..1225302 /locus_tag="B565_1110" /note="Bacterial export proteins, family 3; Region: Bac_export_3; cl00867" /db_xref="CDD:186229" gene 1225302..1226099 /locus_tag="B565_1111" /db_xref="GeneID:10487028" CDS 1225302..1226099 /locus_tag="B565_1111" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein fliR" /protein_id="YP_004391763.1" /db_xref="GI:330828811" /db_xref="GeneID:10487028" /translation="MTYTTALIMEWLSSILWPLARVSSLLMVMAVFGSRLAPARVRMG LALAITFLIAPLLPKMPPIELFSAGSFLVLGQQLLIGIALGLMTQFLMESFVMAGQVI AMQTSLGFATLVDPMNGQSAPVVGQFYLMLATLVFLALDGHLVMLRLVILSFETLPVS EHGLSVSSMKTLSAFLGVMYQAALVMSLSAIVALLLINFAFGVMTRAAPQLNIFSIGF AVSMMSGLLILWLTIGGFLGHFDIMWERVQEVSCELINTQCFGGAHG" misc_feature 1225323..1226048 /locus_tag="B565_1111" /note="Bacterial export proteins, family 1; Region: Bac_export_1; cl00734" /db_xref="CDD:186167" gene 1226092..1227222 /locus_tag="B565_1112" /db_xref="GeneID:10487029" CDS 1226092..1227222 /locus_tag="B565_1112" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FlhB" /protein_id="YP_004391764.1" /db_xref="GI:330828812" /db_xref="GeneID:10487029" /translation="MADTDQERTEQPTGKRLQQAREKGQIARSKELGTASVLLSAVFG LLMLKGSLATAMIKVVTMGFTLDREQAFDPNAMIAMVPALLGELVLPLGLLFALVAIA AFIGNTLMGGMNFSTEAMMPKMSKLSPLSGLKRMFGVQSLIELVKSIAKVVFITLFAW WMLSSQFNHLLNLSMEGFPGGIIDALELFLWMLIILCCALLPIVAIDVPFQQWNHMRQ LKMTKQEVKDEFKDSEGKPEVKGKIRQLQMQMAMRRMMGDVPKADVVITNPTHYSVAL KYDAGKPGAAPKVVAKGTDEIAMKIREIAREYEIPIMPSPALTRAIYHSTELGHEIPE GLFAAVAQVLAYVFQLKKFRRGQGRRPQPLAKDLPIPTEYRK" misc_feature 1226092..1227168 /locus_tag="B565_1112" /note="flagellar biosynthesis protein FlhB; Reviewed; Region: flhB; PRK05702" /db_xref="CDD:180212" misc_feature 1226110..1227153 /locus_tag="B565_1112" /note="Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]; Region: FlhB; cl12017" /db_xref="CDD:196301" gene 1227330..1229432 /locus_tag="B565_1113" /db_xref="GeneID:10487030" CDS 1227330..1229432 /locus_tag="B565_1113" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FlhA" /protein_id="YP_004391765.1" /db_xref="GI:330828813" /db_xref="GeneID:10487030" /translation="MEFKAVLGQFKEYRGVLGKGLGTPLLVLAALGMVVLPIPPLMLD VLFSFNIALSIVVLLVSVYTRRPLEFAAFPTVLLLATLLRLALNVASTRVVLLEGHNG SAAAGHVIEAFGNVVIGGNYAVGIIVFTILMIINFVVITKGSGRIAEVSARFTLDAMP GKQMAIDADLNAGLINQEEAKKRRQDVTQEADFYGSMDGASKFVKGDAIAGIMILFIN IIGGFIIGMMQHQLTFSESAEIYTLLAIGDGLVAQIPSLLLSIAAAIIVTRQNTDQDM GTAVLGQLFDNPKALIISAGILLMMGLVPGMPHFAFLSLGALAAAGAWWLLRREKLAA AKAAKGELLPATAEQPHEQKELSWDDVMPVDIIGLEVGYQLIPLVDRNQGGELLNRIK GVRKKLSQELGFLVPAVHIRDNLDLAPNQYRITLMGVSTGEANVYHDKEMAINPGQVF GQIQGIATRDPAFGLEAVWVAKDMISQAQTLGYTVVDTATVVATHLSQILTNHAALLL GHDEVQQLLDMIGKHQSKLVEGLVPEVISMGNLVKVLQNLLNEGVPIRDMRTILQTLV EYAPRSPDPEVLTAACRIALRRLIVQEIAGPDPELPVITLAPELERILHQSLQAGGGD GAGIEPGLAERMQRSLVEATQRQELEGQPAVLLTSGILRNTLAKFVKNAIPGLRVLSY QEVPDDKQIRIVSAVGQN" misc_feature 1227330..1229429 /locus_tag="B565_1113" /note="Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion]; Region: FlhA; cl07980" /db_xref="CDD:195651" misc_feature 1227330..1229429 /locus_tag="B565_1113" /note="flagellar biosynthesis protein FlhA; Validated; Region: flhA; PRK06012" /db_xref="CDD:180350" gene 1229449..1230873 /locus_tag="B565_1114" /db_xref="GeneID:10487031" CDS 1229449..1230873 /locus_tag="B565_1114" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FlhF" /protein_id="YP_004391766.1" /db_xref="GI:330828814" /db_xref="GeneID:10487031" /translation="MKIKRFFAKDMRTALAEVKETLGPDAVIMSNKKVTGGVEIVAAV DYQSQVPGPKDAPVRRQLNDESVNISSAARQMIRPEPTPAKEQNEHYADTLAALLARQ QKLKPGNGAPLGNTQSAGLAAANAAPRTLAEQGQWGAAPEPAKPKARVASGQRPPQPA QRDQEMEGMRKEMASIRKLLEHQISGLMWQEVERREPMRALLIKELKKLGFDDAFADQ LAGLIPEDMSIHQAMAQLAEVLTAQLKISEDEIMRQGGAVALLGPTGVGKTTTIAKLA ARFAMKYGAEQVALITTDNYRIGAHEQLQTYGRIMGCPVRQVRDAEELANALYQFRHR RLVLIDTAGVGQRDIRLTEQLDTLVKNAKVRIRSYLVMSATSQRRVMQEAVDHFRRIP LSGCILTKLDESLNLGEVINVCIQNSLPISYITDGQRVPEDIQVANAAQLVGAAMGSL ERETEEPYFWGAGFGEAEDSEFYE" misc_feature 1229449..1230819 /locus_tag="B565_1114" /note="flagellar biosynthesis regulator FlhF; Validated; Region: flhF; PRK05703" /db_xref="CDD:180213" misc_feature 1230226..1230720 /locus_tag="B565_1114" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" gene 1230875..1231750 /locus_tag="B565_1115" /db_xref="GeneID:10487032" CDS 1230875..1231750 /locus_tag="B565_1115" /codon_start=1 /transl_table=11 /product="CobQ/CobB/MinD/ParA family protein" /protein_id="YP_004391767.1" /db_xref="GI:330828815" /db_xref="GeneID:10487032" /translation="MYMDQASGLRKMRQNNRVKVIAVSGGKGGVGKTNVTLNVAGAMA AQGKRVMVLDADLGLANVDVMLGLRVHRNLSHVLAGECTIDDIIVEGPYGMMIVPATS GTQSMVELSPVQHAELIRAFSEMKTQVDILLVDTAAGISDMVLSFTRAAQDIMVVVCD EPTSITDAYALIKILSKDHGVFRFKVVANMVRSLREGQELFAKLTRVTDRFLDTSLEL VACVPYDTNLRAAVRKQKLIVEAFPKSPAALAFRALANKAASWPVPNQPGGHLEFFLE NLLQKPATTQEGSRE" misc_feature 1230980..1231711 /locus_tag="B565_1115" /note="Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]; Region: flhG; COG0455" /db_xref="CDD:30803" misc_feature 1230980..>1231066 /locus_tag="B565_1115" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" misc_feature <1231259..1231543 /locus_tag="B565_1115" /note="FleN is a member of the Fer4_NifH superfamily. It shares the common function as an ATPase, with the ATP-binding domain at the N-terminus. In Pseudomonas aeruginosa, FleN gene is involved in regulating the number of flagella and chemotactic motility by...; Region: FleN-like; cd02038" /db_xref="CDD:73301" gene 1231785..1232462 /locus_tag="B565_1116" /db_xref="GeneID:10487033" CDS 1231785..1232462 /locus_tag="B565_1116" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="YP_004391768.1" /db_xref="GI:330828816" /db_xref="GeneID:10487033" /translation="MLVERHAPLVKRIAQHLLARLPSSVLLDDLIQAGMIGLLEASRN FDGSKGASFETYAGIRIRGAMLDEIRRGDWVPRSVHRNSRAIAEAIENVEQTHGRDAR DTEVAAEMGVSIADYHAMLQDVSCGKIIGIEDLGVSEDVIGHPDDAPSGSGFDELAAE RFQIQLSEQIGRLPEREALVLSLYYDEELNLREIGEVLNVSESRVSQIHSQAMHRLRA RLRDWHL" misc_feature 1231788..1232456 /locus_tag="B565_1116" /note="flagellar biosynthesis sigma factor; Validated; Region: fliA; PRK06986" /db_xref="CDD:180784" misc_feature 1231788..1232006 /locus_tag="B565_1116" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature 1232025..>1232162 /locus_tag="B565_1116" /note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539" /db_xref="CDD:146934" misc_feature 1232271..1232435 /locus_tag="B565_1116" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cd06171" /db_xref="CDD:100119" misc_feature order(1232304..1232306,1232334..1232336,1232352..1232357, 1232385..1232387,1232391..1232396,1232400..1232408, 1232412..1232417,1232421..1232423) /locus_tag="B565_1116" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:100119" gene 1232574..1232957 /locus_tag="B565_1117" /db_xref="GeneID:10487034" CDS 1232574..1232957 /locus_tag="B565_1117" /codon_start=1 /transl_table=11 /product="response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /protein_id="YP_004391769.1" /db_xref="GI:330828817" /db_xref="GeneID:10487034" /translation="MDKNMKILIVDDFSTMRRIIKNLLRDLGFNNTHEADDGNTALPM LKNGDFQFVVTDWNMPGMQGIDLLKAIRVDEKLKHLPVLMVTAEAKREQIIEAAQAGV NGYIVKPFTAATLKEKLDKIFERIG" misc_feature 1232592..1232933 /locus_tag="B565_1117" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature 1232595..1232942 /locus_tag="B565_1117" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(1232604..1232609,1232739..1232741,1232763..1232765, 1232829..1232831,1232886..1232888,1232895..1232900) /locus_tag="B565_1117" /note="active site" /db_xref="CDD:29071" misc_feature 1232739..1232741 /locus_tag="B565_1117" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(1232748..1232753,1232757..1232765) /locus_tag="B565_1117" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 1232895..1232903 /locus_tag="B565_1117" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" gene 1232970..1233710 /locus_tag="B565_1118" /db_xref="GeneID:10487035" CDS 1232970..1233710 /locus_tag="B565_1118" /codon_start=1 /transl_table=11 /product="chemotaxis protein CheZ" /protein_id="YP_004391770.1" /db_xref="GI:330828818" /db_xref="GeneID:10487035" /translation="MMAKTRAMISLDQARMLVAHLEQGEFELADELLAEVCAPNAADL FEKVGQLTRQLHDSLQEFRLDPRIPDLATHDIPDARERLSYVIDMTDKAANRTMDAVE ASLPIADRLNDNIQLVMPNWNALMSRDMSVGQFKSLCHQLDDFIKASESDADKLRQLL TEILMAQDFQDLTGQMIRKVIKLVQEVETKLIEMLTMFGEASAEHSTRSIPVNGIEAE GPIMNPEARADVVNGQDDVDDLLSSLGF" misc_feature 1233096..1233707 /locus_tag="B565_1118" /note="Chemotaxis phosphatase, CheZ; Region: CheZ; cl01219" /db_xref="CDD:186389" gene 1233722..1235914 /locus_tag="B565_1119" /db_xref="GeneID:10487036" CDS 1233722..1235914 /locus_tag="B565_1119" /codon_start=1 /transl_table=11 /product="transducing histidine kinase" /protein_id="YP_004391771.1" /db_xref="GI:330828819" /db_xref="GeneID:10487036" /translation="MAFEVDEDILQDFLVEASEILEQLSEQLVDLEKRPDDKNLLNAI FRGFHTVKGGAGFLSLGELVDVCHGAENVFDILRNGKRTVTAELMDVILQALDAINVM FAQVQNREAPSPASDDLLHDLHELCKPEGEEQLRTATSAAAAVESEPAAPVVVEEVAP EVVEPAAISSEPTPVNGGGSIDEISADEFERLLDELHGVGGAPTKMAAAAPIAGGSGD ITDDEFEALLDQLHGQGQHMGAPEVNPLKSVQKEVDELIDDDEFERLLDELHGRGQGP QSTLAPAAPAAPAAPAAPAAVTPPKPTTPVAKPAPAAPAKPAEAAKAPAPAAKAAPAP AENSAVQSDTTVRVDTKTLDVIMNMVGELVLVRNRLVSLGIASNDEEMSKAVANLDVV TADLQGAVMKTRMQPIKKVFGRFPRVVRDLARTLKKEIELVMVGEETDLDKNLVEALA DPLVHLVRNSCDHGVEMPDVREKAGKPRQGTITLSASQQGDHILLCIEDDGAGMDPEK LKSIAISRGVLDADTAARMSDNDAYNLIFAPGFSTKAEISDISGRGVGMDVVKTSIVS LNGSVHIDSTWGKGTRLEIKVPLTLAILPTLMVEVGEQTFALPLGCVNEIFHLDLKKA NMVDGQLTIIVREKAIPLFYLHKWLIRGANKRSRQDTGHVVIVQIGTQQIGFVVDSLI GQEEVVIKPLDNLLQGTPGMAGATITSDGGIALILDVPSLLKAYARRH" misc_feature 1233737..1234033 /locus_tag="B565_1119" /note="Histidine Phosphotransfer domain, involved in signalling through a two part component systems in which an autophosphorylating histidine protein kinase serves as a phosphoryl donor to a response regulator protein; the response regulator protein is...; Region: HPT; cd00088" /db_xref="CDD:28972" misc_feature order(1233866..1233868,1233875..1233880,1233923..1233925, 1233932..1233934) /locus_tag="B565_1119" /note="putative binding surface; other site" /db_xref="CDD:28972" misc_feature 1233866..1233868 /locus_tag="B565_1119" /note="active site" /db_xref="CDD:28972" misc_feature 1234751..1234930 /locus_tag="B565_1119" /note="Signal transducing histidine kinase, homodimeric domain; Region: H-kinase_dim; pfam02895" /db_xref="CDD:190468" misc_feature 1235066..1235482 /locus_tag="B565_1119" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(1235084..1235086,1235096..1235098,1235105..1235107, 1235210..1235212,1235216..1235218,1235222..1235224, 1235228..1235233,1235381..1235392,1235438..1235440, 1235444..1235446,1235459..1235464,1235468..1235470) /locus_tag="B565_1119" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 1235096..1235098 /locus_tag="B565_1119" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(1235222..1235224,1235228..1235230,1235381..1235383, 1235387..1235389) /locus_tag="B565_1119" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature 1235492..1235887 /locus_tag="B565_1119" /note="CheA regulatory domain; CheA is a histidine protein kinase present in bacteria and archea. Activated by the chemotaxis receptor a histidine phosphoryl group from CheA is passed directly to an aspartate in the response regulator CheY. This signalling...; Region: CheA_reg; cd00731" /db_xref="CDD:29681" gene 1235947..1237062 /locus_tag="B565_1120" /db_xref="GeneID:10487037" CDS 1235947..1237062 /locus_tag="B565_1120" /codon_start=1 /transl_table=11 /product="two-component system response-regulator/protein-glutamate methylesterase CheB" /protein_id="YP_004391772.1" /db_xref="GI:330828820" /db_xref="GeneID:10487037" /translation="MAVKVLVVDDSSFFRRRVSEIINQDPMLTVIDTAQNGREAVDKA MSLRPDVITMDIEMPVMDGISAVREIMAKCPTPILMFSSLTHEGAKATLDALDAGALD FLPKKFEDIARDKDEAVRLLQQRVKEISRKRFLMTSAARPKAPEPVARAPLGSTVPRT SDRQPDLQRTVPSASFKRSGKSYQLVAIGTSTGGPVALQNVLTKLPGDFPHPILLIQH MPATFTAAFAARLNGLCQIGVKEAEDGDVLKPGHAYLAPGGKQMLLEGRGIGARIRIV DGNDKVNYKPCVDITFASAAKTYADKVLAIVLTGMGADGRDGARLLKEQGSTIWAQDE ASCVVYGMPQAVAKAGIASESLPLDKVAQRILVELGR" misc_feature 1235947..1237059 /locus_tag="B565_1120" /note="chemotaxis-specific methylesterase; Provisional; Region: PRK00742" /db_xref="CDD:179106" misc_feature 1235962..>1236207 /locus_tag="B565_1120" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(1235971..1235976,1236109..1236111,1236133..1236135, 1236190..1236192) /locus_tag="B565_1120" /note="active site" /db_xref="CDD:29071" misc_feature 1236109..1236111 /locus_tag="B565_1120" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(1236118..1236123,1236127..1236135) /locus_tag="B565_1120" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 1236499..1237044 /locus_tag="B565_1120" /note="CheB methylesterase; Region: CheB_methylest; pfam01339" /db_xref="CDD:144802" gene 1237065..1237802 /locus_tag="B565_1121" /db_xref="GeneID:10487038" CDS 1237065..1237802 /locus_tag="B565_1121" /codon_start=1 /transl_table=11 /product="MotA/TolQ/ExbB proton channel" /protein_id="YP_004391773.1" /db_xref="GI:330828821" /db_xref="GeneID:10487038" /translation="MGLLGLLLALGAIAIAQLWHGGSLLTLVDGPAFLIVLGGTVGAV TLQTPAKYILLALRQLLWIFTPPHQDLATQAERLQSWAVFARQQGLLALENQAEHEED NFTRQGLGMIVDGVSTEDIRMLLEADIDIEQERNEHAARVFEAMGGYSPTIGIIGAVL GLIQAMFHLEDPSALGAGIAVAFVATIYGVGFANLIYLPIANRLRAFHYHYALFQEMT LEGLLAIAHGENGLQVERRLRAYLKGE" misc_feature 1237113..1237790 /locus_tag="B565_1121" /note="MotA/TolQ/ExbB proton channel family; Region: MotA_ExbB; cl00568" /db_xref="CDD:186086" gene 1237805..1238725 /locus_tag="B565_1122" /db_xref="GeneID:10487039" CDS 1237805..1238725 /locus_tag="B565_1122" /codon_start=1 /transl_table=11 /product="OmpA family protein" /protein_id="YP_004391774.1" /db_xref="GI:330828822" /db_xref="GeneID:10487039" /translation="MRKRYRLHLQGREHLDRWLVSYADYMTLIFALFVVLYSVALVNK DKYRAVIDGMSQAFSVMQSGGNGLLEGQGNSLLDNAVSASPSLLESPASPSPSLAPIS GVPVLQDGATLAKLDMQLQQSMGSLVDAGIVKLTQDENWLTVELSSGLLFGSGSAFLG PNAAPVINTLSSILKPVDNYVRVRGYTDNQQINNEIYRSNWALSAARAEAVLNGLIAD GIAPQRLAFEAYGEFSPFADNGSEQGRLQNRKVVVAISKFAWVPPAPVVATSTVVAEP VPAVQQAVDAGEIKVITLPGGGIRITTRQD" misc_feature 1237805..1238575 /locus_tag="B565_1122" /note="flagellar motor protein MotD; Reviewed; Region: PRK09038" /db_xref="CDD:181618" misc_feature 1238285..1238569 /locus_tag="B565_1122" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature order(1238363..1238368,1238387..1238389,1238399..1238404, 1238411..1238413,1238537..1238539,1238549..1238551) /locus_tag="B565_1122" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene 1238730..1239524 /locus_tag="B565_1123" /db_xref="GeneID:10487040" CDS 1238730..1239524 /locus_tag="B565_1123" /codon_start=1 /transl_table=11 /product="CobQ/CobB/MinD/ParA family protein" /protein_id="YP_004391775.1" /db_xref="GI:330828823" /db_xref="GeneID:10487040" /translation="MIVWTVANQKGGVGKTTTVVSLAGILAQRGQRVLLIDTDPHASL TAYLDFDSDRLDGTLYELFQAVKPTAELVNKLTLKTKFENINLLPASITLATLDRVMG NREGMGLVLKRALLRIQEQYDYVLIDCPPVLGVMMVNALAACDRILVPVQTEFLALKG LERMMKTFEIMQRSKRDKFRYTVIPTMFDKRTRASLMTLKSIKDQYGDSVWNAVIPID TKFRDASLLHIPPSIYSPGSRGTYAYETLLNHLDALERQRVHEVTA" misc_feature 1238730..1239482 /locus_tag="B565_1123" /note="ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]; Region: Soj; COG1192" /db_xref="CDD:31385" misc_feature 1238736..>1238852 /locus_tag="B565_1123" /note="ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following...; Region: ParA; cd02042" /db_xref="CDD:73302" misc_feature 1238757..1238777 /locus_tag="B565_1123" /note="P-loop; other site" /db_xref="CDD:73302" misc_feature 1238775..1238777 /locus_tag="B565_1123" /note="Magnesium ion binding site [ion binding]; other site" /db_xref="CDD:73302" misc_feature <1239090..1239287 /locus_tag="B565_1123" /note="ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following...; Region: ParA; cd02042" /db_xref="CDD:73302" misc_feature 1239111..1239113 /locus_tag="B565_1123" /note="Magnesium ion binding site [ion binding]; other site" /db_xref="CDD:73302" gene 1239521..1240393 /locus_tag="B565_1124" /db_xref="GeneID:10487041" CDS 1239521..1240393 /locus_tag="B565_1124" /codon_start=1 /transl_table=11 /product="CheW domain-containing protein" /protein_id="YP_004391776.1" /db_xref="GI:330828824" /db_xref="GeneID:10487041" /translation="MRDTIQVRAMDDYFHSLLLDEPLVLDEVEEVQSAPVLQLQRQPQ SVPEVVAAPYLESDPRLAQLGELLAQVGQVQFENDAFTQEITLTTPLEIVAEESLLPV EPEWPEEVLLPEVAEPHTTILTETALEVAPVEASEPVAWENIDTGKEFQALFFEVAGV TFAVPLTELGGIHQLGEITSLFGQPGWYKGIMTSREQKMNVVDTAQWVMPGQHLEMDD YKYLIMLGESPWGLACHHLKGTELLHRDQVKWRHQEGKRPWLAGMVKEKMCALLHVRE LLLLLERGVNIEGR" misc_feature 1239965..1240315 /locus_tag="B565_1124" /note="CheW-like domain. CheW proteins are part of the chemotaxis signalling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and...; Region: CheW_like; cd00588" /db_xref="CDD:29680" gene 1240463..1240951 /locus_tag="B565_1125" /db_xref="GeneID:10487042" CDS 1240463..1240951 /locus_tag="B565_1125" /codon_start=1 /transl_table=11 /product="CheW-like protein" /protein_id="YP_004391777.1" /db_xref="GI:330828825" /db_xref="GeneID:10487042" /translation="MTEKRNIAQNLAEDEVLQWVTFQLENETYGINVMQVQEVLRYTE IAPVPGAPEYVLGIINLRGNVVTVIDTRSRFGLPSGDVSENSRIVIIEAEKQVIGIMV DSVAEVVYLRSSEIDAAPAVGTEESAKFIQGVSNRDGQLLILVDLNKLLSDEEWEDIG SL" misc_feature 1240511..1240927 /locus_tag="B565_1125" /note="CheW, a small regulator protein, unique to the chemotaxis signalling in prokaryotes and archea. CheW interacts with the histidine kinase CheA, most likely with the related regulatory domain of CheA. CheW is proposed to form signalling arrays together...; Region: CheW; cd00732" /db_xref="CDD:29682" misc_feature order(1240640..1240657,1240739..1240741,1240745..1240747, 1240904..1240927) /locus_tag="B565_1125" /note="putative CheA interaction surface; other site" /db_xref="CDD:29682" gene 1240995..1241357 /locus_tag="B565_1126" /db_xref="GeneID:10487043" CDS 1240995..1241357 /locus_tag="B565_1126" /codon_start=1 /transl_table=11 /product="DNA repair ATPase" /protein_id="YP_004391778.1" /db_xref="GI:330828826" /db_xref="GeneID:10487043" /translation="MSLIALAFASYIWFKSKRSKQESEASVATLQGQLESLRKQMMEL HTGAIGMGQRLQSVEGAMQQVNERQQELTMQDPERRLYSRAAKMVELGADLDEVMSEC ELPKAEAELLISLRKGRS" misc_feature 1241004..>1241219 /locus_tag="B565_1126" /note="HemX; Region: HemX; cl14667" /db_xref="CDD:187421" misc_feature 1241139..1241345 /locus_tag="B565_1126" /note="Protein of unknown function (DUF2802); Region: DUF2802; pfam10975" /db_xref="CDD:151422" gene 1241556..1242200 /locus_tag="B565_1127" /db_xref="GeneID:10487044" CDS 1241556..1242200 /locus_tag="B565_1127" /codon_start=1 /transl_table=11 /product="ATP binding protein of heme exporter A" /protein_id="YP_004391779.1" /db_xref="GI:330828827" /db_xref="GeneID:10487044" /translation="MLLQVNNLSCVREDRTLFEHLSFSVAPGDLVQIEGPNGVGKTSL LRLLTGLSQPFAGEVCWNGENIRHCRDEYHANLLYLGHQPGVKAALTPFENLKFYQQL HHPQQTETDLWQILARVGLAGFEENPTGQLSAGQQRRVALARLWLSQKPALWILDEPF TAIDKQGVKVLEQLFLAHAERGGMVILTTHQDLTLMQGRLKTISLTPFASTLQE" misc_feature 1241559..1242176 /locus_tag="B565_1127" /note="cytochrome c biogenesis protein CcmA; Provisional; Region: PRK13538" /db_xref="CDD:184125" misc_feature 1241562..1242173 /locus_tag="B565_1127" /note="CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH); Region: ABC_CcmA_heme_exporter; cd03231" /db_xref="CDD:72990" misc_feature 1241658..1241681 /locus_tag="B565_1127" /note="Walker A/P-loop; other site" /db_xref="CDD:72990" misc_feature order(1241667..1241672,1241676..1241684,1241799..1241801, 1242024..1242029,1242123..1242125) /locus_tag="B565_1127" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72990" misc_feature 1241790..1241801 /locus_tag="B565_1127" /note="Q-loop/lid; other site" /db_xref="CDD:72990" misc_feature 1241949..1241978 /locus_tag="B565_1127" /note="ABC transporter signature motif; other site" /db_xref="CDD:72990" misc_feature 1242012..1242029 /locus_tag="B565_1127" /note="Walker B; other site" /db_xref="CDD:72990" misc_feature 1242036..1242047 /locus_tag="B565_1127" /note="D-loop; other site" /db_xref="CDD:72990" misc_feature 1242111..1242131 /locus_tag="B565_1127" /note="H-loop/switch region; other site" /db_xref="CDD:72990" gene 1242205..1242873 /locus_tag="B565_1128" /db_xref="GeneID:10487045" CDS 1242205..1242873 /locus_tag="B565_1128" /codon_start=1 /transl_table=11 /product="cytochrome c biogenesis ABC transporter subunit CcmB" /protein_id="YP_004391780.1" /db_xref="GI:330828828" /db_xref="GeneID:10487045" /translation="MLRAVMHLIHRELLMALRQRSDILNPLWFFLIVITLFPLGIGPE PKLLARIAPGIIWVAALLAAMLSLERLFRDDFADGALEQMMLMPHPLGLLALAKVVAH WLLTGLPLLLISPLLAILLSLDMNTYLAVVATLALGTPVLSLLGAVGVALTVGLRKGG VLLSLLILPLYIPVLIFATSAIDAAGMSLPYGGQLAILAAMLVGALTLTPLAVSAALR VSLN" misc_feature 1242226..1242858 /locus_tag="B565_1128" /note="CcmB protein; Region: CcmB; cl01016" /db_xref="CDD:141064" gene 1243044..1243784 /locus_tag="B565_1129" /db_xref="GeneID:10487046" CDS 1243044..1243784 /locus_tag="B565_1129" /codon_start=1 /transl_table=11 /product="cytochrome c biogenesis ABC transporter permease" /protein_id="YP_004391781.1" /db_xref="GI:330828829" /db_xref="GeneID:10487046" /translation="MWKWLHPYAKPERAYQLAGTLLPWFAVISLLSFVIGTVWGLAFA PADYQQGDSFRIIYIHVPSAILSMGAYSTMAVAAFIGLVWQLRMADMTVAAIAPVGAV FTFIALFTGAAWGKPMWGTWWVWDARLTSELILLFLYLGVIALYNAFSDKVVAGRAAG ILALVGVINLPIIHYSVEWWNTLHQGATITKFDKPSISPEMLWPLLIMILAFAAFLGA LTLMRFRNELLMREWHRPWVKEIAEQEK" misc_feature 1243176..1243655 /locus_tag="B565_1129" /note="Cytochrome C assembly protein; Region: Cytochrom_C_asm; cl00504" /db_xref="CDD:186041" gene 1243787..1243993 /locus_tag="B565_1130" /db_xref="GeneID:10487047" CDS 1243787..1243993 /locus_tag="B565_1130" /codon_start=1 /transl_table=11 /product="Heme exporter protein D" /protein_id="YP_004391782.1" /db_xref="GI:330828830" /db_xref="GeneID:10487047" /translation="MHFASFSDFMAMGGYAFYVWLSFGLTLVCLVGIIISTRMKTRSL LAELRSKQAREARRKAAQQMENTL" misc_feature 1243787..>1243927 /locus_tag="B565_1130" /note="Heme exporter protein D (CcmD); Region: CcmD; cl11475" /db_xref="CDD:189227" gene 1243990..1244481 /locus_tag="B565_1131" /db_xref="GeneID:10487048" CDS 1243990..1244481 /locus_tag="B565_1131" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CcmE" /protein_id="YP_004391783.1" /db_xref="GI:330828831" /db_xref="GeneID:10487048" /translation="MNPRRKKRLTIILAITLGLATVSGLVLYALSQNIDLFYTPSELV EGKGPDKIKPEEGQRLRIGGLVVPGSVQRDPQSLKVAFKLVDNGGHLVKVEFDGILPD LFREGQGIVAQGTLKDATTVEAFEVLAKHDENYMPPEVADATNGMHFKPEYTEAQLKG AKQ" misc_feature 1243990..1244472 /locus_tag="B565_1131" /note="CcmE; Region: CcmE; cl00994" /db_xref="CDD:186292" gene 1244564..1246519 /locus_tag="B565_1132" /db_xref="GeneID:10487049" CDS 1244564..1246519 /locus_tag="B565_1132" /codon_start=1 /transl_table=11 /product="cytochrome c heme lyase subunit CcmF" /protein_id="YP_004391784.1" /db_xref="GI:330828832" /db_xref="GeneID:10487049" /translation="MIPELGQFALILAFATALLLGSYPLLGASWGRLGMMSAARPLAY AQFLLLLLSFLCLTWAFIDNDFTVQYVATNSNSLLPLAYRISAVWGAHEGSLLLWVLT LGGWTAAVAMFSRRLPLDAVARVLGVLGLISVGFTAFVLFTSDPFTRTLPYFPVDGRD LNPLLQDPGLIFHPPMLYMGYVGFSVAFAFAIASLMTGRLDATWARWSRPWTMAAWVF LTLGIVLGSWWAYYELGWGGWWFWDPVENASFMPWLAGTALLHSLAVSEKRATFKAWT VLLALSAFSLSLLGTFLVRSGVLVSVHAFASDPTRGLFILGFLLAVIGSSLLLFAFKG SQVKSHGKHELWSRETLLLCNNIMLVAGLLTVLLGTLLPLVHKELGLGSISIGTPFFN HIYSWLIIPFALLLGGGPLFRWRRQELGELKSKVVVALVLSLAAALLLPQLFAETFKP WAAVGIGLGAWIIVTSVQETWARATHKHSFAVGVRKLGNSHWAMILGHVGLAVSIIGI ACTQNYSIEKDLRMQAGDRVHFADYEFVFAGIKEKNGPNYDGFKGVLEVHKNGKQVAL LKPEKRMYKVSRMPMTEAAIDAGITRDLYAALGEQLDNGAWAVRIYYKPFVRWIWFGG VFMAIGGVLAMLDKRYRFGRREEEAKA" misc_feature 1244753..1246486 /locus_tag="B565_1132" /note="Cytochrome C assembly protein; Region: Cytochrom_C_asm; cl00504" /db_xref="CDD:186041" gene 1246516..1247046 /locus_tag="B565_1133" /db_xref="GeneID:10487050" CDS 1246516..1247046 /locus_tag="B565_1133" /codon_start=1 /transl_table=11 /product="periplasmic protein thiol--disulfide oxidoreductase DsbE" /protein_id="YP_004391785.1" /db_xref="GI:330828833" /db_xref="GeneID:10487050" /translation="MNKKTWLFLIPFIVFLLGAVFLFKGLYSDPTKLESVMVGKEVPV FTLQDIYDLNKQHDRSILTGRPMLLNVWATWCPTCYGEHTYLKQLAGQGIPIIGMNYK DERDKAIKWLAELGNPYQVNLYDPDGMLGLDLGVYGAPETFFIDSKGIIRYRHVGDIN PENWASTLKPIFDAMK" misc_feature 1246633..1247010 /locus_tag="B565_1133" /note="TlpA-like family, DsbE (also known as CcmG and CycY) subfamily; DsbE is a membrane-anchored, periplasmic TRX-like reductase containing a CXXC motif that specifically donates reducing equivalents to apocytochrome c via CcmH, another cytochrome c...; Region: TlpA_like_DsbE; cd03010" /db_xref="CDD:48559" misc_feature order(1246741..1246743,1246750..1246752) /locus_tag="B565_1133" /note="catalytic residues [active]" /db_xref="CDD:48559" misc_feature 1246822..1246890 /locus_tag="B565_1133" /note="central insert; other site" /db_xref="CDD:48559" gene 1247058..1247537 /locus_tag="B565_1134" /db_xref="GeneID:10487051" CDS 1247058..1247537 /locus_tag="B565_1134" /codon_start=1 /transl_table=11 /product="cytochrome c heme lyase subunit CcmL" /protein_id="YP_004391786.1" /db_xref="GI:330828834" /db_xref="GeneID:10487051" /translation="MRVFIASLLLLLGWIVQAPAMAAIDVYTFDNDNQEQVFRELTKE LRCPKCQNQDIADSNAGLAKDLRDKTYQMVREGKDKEEIVDYMVARYGNFILYNPPLM ASTLILWLGPLLVILIGGAVVVMRSRRPPAVKKQLDNALSEEEQRRLAELLKEEEKQ" misc_feature 1247067..1247465 /locus_tag="B565_1134" /note="Cytochrome C biogenesis protein; Region: CcmH; cl01179" /db_xref="CDD:194063" gene 1247534..1248802 /locus_tag="B565_1135" /db_xref="GeneID:10487052" CDS 1247534..1248802 /locus_tag="B565_1135" /codon_start=1 /transl_table=11 /product="putative cytochrome c-type biogenesis protein" /protein_id="YP_004391787.1" /db_xref="GI:330828835" /db_xref="GeneID:10487052" /translation="MTAFWIVIAGLLVLVSLALVVPLWRGEGKQSISRSALNKQLYRQ RLLEIGEEREQGVLAEESDSLVELQRSLLDDIPDVEQTARSGKSLIWIPGVLVLLVVS LGLYYKLGSWQEVSRWQDASSRLGELSNRILVERDAQVTEQDLLDFTLALRTRLKDEP NDYRGWLLLGRLALDGNDPEMASEALERAYTLAPQKSLVAVPYAQALMMTGDEAQADA LLQAAIAQDPGNIEARSVYAFMALQKEDFQTALARWQAMLPLMEKGTPRYVMVERSME YARAQLKQRGIEVTNSGAAKAGAVEGQPLAVKEGEFPIHVTLAAGIQMPEDAHLFVFA VVPNGPPMPIAVKRIAGPTLPVTLSLGDGDAMMEGSKLAAYPELQFKARLSRGGNVMN KEGAFEGVSVPVKTAEIPAAPIDIRIDHAL" misc_feature 1247540..1248391 /locus_tag="B565_1135" /note="Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones]; Region: COG4235" /db_xref="CDD:33959" misc_feature 1247540..>1247797 /locus_tag="B565_1135" /note="cytochrome c-type biogenesis protein CcmI; Region: cytochro_ccmI; TIGR03142" /db_xref="CDD:163153" gene 1248888..1249700 /locus_tag="B565_1136" /db_xref="GeneID:10487053" CDS 1248888..1249700 /locus_tag="B565_1136" /codon_start=1 /transl_table=11 /product="VacJ-like lipoprotein" /protein_id="YP_004391788.1" /db_xref="GI:330828836" /db_xref="GeneID:10487053" /translation="MYLRSGAILAALLLAGCAGGPPKPGPESLDLNPGMNNPGATSTA ADPRDPFQGANRAMWAVNYDVLEPYVARPVVHAYARYIPVGVKDGIANFVANFDEPSS MVNHLITGDLKGAGTNLGRFTLNTTVGLLGIFDVAKHAGLERNKLEMDTVLGRADIGN GAYIMVPVYGPTTTRELVGDAIDSFYFPYALLTFPMKVAHWALDGLGTRAKLIDQERI IDNSLDPYALTKDFYLQYNQGKVTGKQTELKASQQEQADDANLDEYMDELDQ" misc_feature 1248993..1249694 /locus_tag="B565_1136" /note="VacJ like lipoprotein; Region: VacJ; cl01073" /db_xref="CDD:186319" gene complement(1249813..1250397) /locus_tag="B565_1137" /db_xref="GeneID:10487054" CDS complement(1249813..1250397) /locus_tag="B565_1137" /codon_start=1 /transl_table=11 /product="Superoxide dismutase" /protein_id="YP_004391789.1" /db_xref="GI:330828837" /db_xref="GeneID:10487054" /translation="MAFELPALPYAINALEPHISQETLEYHHGKHHNTYVVNLNNLVP GTEFEGKSLEEIIKTSNGGIFNNAAQIWNHTFYWHCLSPNGGGEPTGALADAINKAFG SFAEFKDAFTKSAIGNFGSSWTWLVKKADGSLAIVNTSNAGCPLTEAGTTPLLTVDLW EHAYYIDFRNLRPKYMETFWALVNWEFVAKNLAA" misc_feature complement(1249816..1250397) /locus_tag="B565_1137" /note="superoxide dismutase; Provisional; Region: PRK10543" /db_xref="CDD:182534" misc_feature complement(1250152..1250394) /locus_tag="B565_1137" /note="Iron/manganese superoxide dismutases, alpha-hairpin domain; Region: Sod_Fe_N; pfam00081" /db_xref="CDD:189380" misc_feature complement(1249825..1250139) /locus_tag="B565_1137" /note="Iron/manganese superoxide dismutases, C-terminal domain; Region: Sod_Fe_C; pfam02777" /db_xref="CDD:145761" gene 1250686..1251030 /locus_tag="B565_1138" /db_xref="GeneID:10487055" CDS 1250686..1251030 /locus_tag="B565_1138" /codon_start=1 /transl_table=11 /product="glutaredoxin-like protein YdhD" /protein_id="YP_004391790.1" /db_xref="GI:330828838" /db_xref="GeneID:10487055" /translation="METIEKIKQQLADNPIIIYMKGSPKLPSCGFSAQASQALMSCGE PFAYVDILQNPDIRAELPKFANWPTFPQLWVEGELIGGCDIMIEMFQAGELQALIKET AAKYKKDDAAAE" misc_feature 1250704..1250973 /locus_tag="B565_1138" /note="Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain...; Region: GRX_PICOT_like; cd03028" /db_xref="CDD:48577" misc_feature order(1250746..1250748,1250770..1250778,1250890..1250895) /locus_tag="B565_1138" /note="putative GSH binding site [chemical binding]; other site" /db_xref="CDD:48577" misc_feature order(1250770..1250772,1250779..1250781) /locus_tag="B565_1138" /note="catalytic residues [active]" /db_xref="CDD:48577" gene 1251390..1252394 /locus_tag="B565_1139" /db_xref="GeneID:10487056" CDS 1251390..1252394 /locus_tag="B565_1139" /codon_start=1 /transl_table=11 /product="Threonine dehydratase catabolic" /protein_id="YP_004391791.1" /db_xref="GI:330828839" /db_xref="GeneID:10487056" /translation="MKMYSNLPIGLHDITEAKKRLTNHIYKTAQLPSNYISERCHGEV YLKLENMQRTGSFKIRGAFNKLSSLSLEDRQKGVVACSAGNHAQGVSLSSAMLGIDAK VVMPCCAPKSKIAATSDYSAKVILHGNSFNDTIAKVSEIVEVEGRVFIPPFDDAKVIA GQGTIGLEIIEDLYDVDNIIVPIGGGGLIAGVAMAIKSINPTIKVIGVQSENVHGMAA SFYAGTMTNHRTSSTLADGCDVARPGSLTFEIVKQLVDDIVLVTEDDIRHSMVDLIQR NKVITEGAGALASAALLSGKLKHYVEGKKTVSIISGGNIDLTRIAEIIEQNNIRQFSL " misc_feature 1251396..1252364 /locus_tag="B565_1139" /note="Threonine dehydratase [Amino acid transport and metabolism]; Region: IlvA; COG1171" /db_xref="CDD:31364" misc_feature 1251420..1252337 /locus_tag="B565_1139" /note="Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly...; Region: Thr-dehyd; cd01562" /db_xref="CDD:107205" misc_feature order(1251420..1251425,1251432..1251434,1251441..1251446, 1251537..1251542,1251978..1251983,1252188..1252190, 1252197..1252202,1252209..1252211,1252221..1252229, 1252326..1252337) /locus_tag="B565_1139" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:107205" misc_feature order(1251561..1251563,1251642..1251644,1251939..1251953, 1252320..1252322) /locus_tag="B565_1139" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:107205" misc_feature 1251561..1251563 /locus_tag="B565_1139" /note="catalytic residue [active]" /db_xref="CDD:107205" gene 1252406..1253737 /locus_tag="B565_1140" /db_xref="GeneID:10487057" CDS 1252406..1253737 /locus_tag="B565_1140" /codon_start=1 /transl_table=11 /product="Threonine/serine transporter tdcC" /protein_id="YP_004391792.1" /db_xref="GI:330828840" /db_xref="GeneID:10487057" /translation="MILDSVVTGSNENTRTWRKSDTTWGLGLFGTAIGAGVLFFPIRA GYGGLIPILIMLVLAYPIAFYCHRALARLCLSGSNPSANITETVEEHFGKMGGVVITF LYFFAICPLLWIYGVTITNTFMAFWEHQLQLVPLNRGVVALALLMLMAFVIYFGKDLM VKVMSYLVFPFIASLIVISLSLVPYWNSAVFDQVNLSEISMFGHDGILVTVWLGISIM VFSFNFSPIVSSFIVSKREEYEQEFGRDFTEKRCSKIISGASMLMVAVVMFFAFSCLF TLSPQNMAEAKAQNIPVLSYLANHFSSMTGSKSAFATTLEYAASIIALVAIFKSFFGH YLGTLEGLNGLILRFGYQGDKSKVSSKKLNMVSMLFIMGSTWLVAYVNPNILDLIEAM GAPIIASLLCLLPMYAVSKTPALAKYKGQASNLFVTIIGVLTILNIVSKLF" misc_feature 1252415..1253734 /locus_tag="B565_1140" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" misc_feature 1252454..1253722 /locus_tag="B565_1140" /note="Amino acid permeases [Amino acid transport and metabolism]; Region: SdaC; COG0814" /db_xref="CDD:31156" gene 1253937..1255145 /locus_tag="B565_1141" /db_xref="GeneID:10487058" CDS 1253937..1255145 /locus_tag="B565_1141" /codon_start=1 /transl_table=11 /product="Propionate kinase/acetate kinase II" /protein_id="YP_004391793.1" /db_xref="GI:330828841" /db_xref="GeneID:10487058" /translation="MKFDSLVLVINCGSSSVKFSVLESQSCEVVISGMADGIETAHPQ LQVGKEPAMSLTENNHTCALAAIAAELKKRDLLGAIALVGHRIAHGGSEFSEAVIIDE HVLAKIKQVSPLAPLHNHANLSGVMAARQLFPNQPQIAVFDTGFHQTLKPEAYIYGLP YQYLQDYGVRRYGFHGTSHRYVAEQACVFMGLDEQHAGLVIAHLGNGASICAVQDGKS VDTSMGMTPLEGLIMGSRSGDIDFGALAYIASKTGQSIEDIEQVLNKQSGLLGISGLS SDMRVLEAAYHEGHPGAKLAIHAFVHRIARHIGGHATSLRRLDAVIFTGGIGENSAFI RKLVCERLQVFGVAISEPFNQRPNSEGCRVISAAESMVLAAVIPTNEEKMIALDAIRL GQLVRQTECV" misc_feature 1253937..1255115 /locus_tag="B565_1141" /note="Acetokinase family; Region: Acetate_kinase; cl01029" /db_xref="CDD:194013" gene 1255190..1257484 /locus_tag="B565_1142" /db_xref="GeneID:10487059" CDS 1255190..1257484 /locus_tag="B565_1142" /codon_start=1 /transl_table=11 /product="putative formate acetyltransferase 3" /protein_id="YP_004391794.1" /db_xref="GI:330828842" /db_xref="GeneID:10487059" /translation="MKVDMQLDQDKFRQAWQGFAGENWKHEINVRDFIQQNYTPYEGD EQFLADATEATTTLWNKVMDGIRIENASHAPVDFDTNIATTITAHGPGYIEQGLEKIV GLQTDKPLKRALHPFGGVNMIRSSFEAYGREMDPEFEYTFSELRKTHNQGVFDVYSPE MLRCRKSGILTGLPDGYGRGRIIGDYRRVALYGIDYLIRERELQFADLQPALERGEQL EQVIRQREELAEHKRALVQIKQMAASYGFDISGPARTAQQAVQWLYFAYLAAVKSQNG GAMSLGRTATFLDIYIERDLKAGLINEQDAQELVDHFIMKIRMVRFLRTPEFDSLFSG DPIWATEVIGGMGLDGRTLVTKNSFRYLHTLKTMGPAPEPNLTILWAEGLPRAFKTYA ARVSIDTSSLQYENDDLMRTDFESDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYC INGGVDEKLKIQVGPKVAPIMDEVLDYETVMASLDSFMDWLAVQYISALNLIHYMHDK YSYEASLMALHDRDVYRTMACGIAGLSVAVDSLAAIKYARVKPVRDADGLAVDFVIEG EYPQYGNNDERADSIACDLVERFMKKIQALPTYRNAVPTQSILTITSNVVYGQKTGNT PDGRRAGAPFAPGANPMHGRDRKGAVASLASVAKLPFKYAKDGISYTFSIVPGALGKE PANRENNLVGLMDGYFHHERDVEGGQHLNVNVMNREMLLDAIDNPDKYPSLTIRVSGY AVRFNALTREQQQDVISRTFTNMM" misc_feature 1255232..1257481 /locus_tag="B565_1142" /note="formate acetyltransferase 1; Region: pyr_form_ly_1; TIGR01255" /db_xref="CDD:162272" misc_feature 1255232..1257469 /locus_tag="B565_1142" /note="Pyruvate formate lyase 1; Region: PFL1; cd01678" /db_xref="CDD:153087" misc_feature order(1255550..1255555,1255637..1255642,1255649..1255654, 1255658..1255660,1255673..1255675,1255682..1255687) /locus_tag="B565_1142" /note="coenzyme A binding site [chemical binding]; other site" /db_xref="CDD:153087" misc_feature order(1255730..1255732,1256018..1256023,1256183..1256185, 1256201..1256203,1256456..1256458,1256498..1256500, 1256507..1256509,1257014..1257016,1257020..1257022) /locus_tag="B565_1142" /note="active site" /db_xref="CDD:153087" misc_feature order(1256456..1256461,1257404..1257406) /locus_tag="B565_1142" /note="catalytic residues [active]" /db_xref="CDD:153087" misc_feature 1257395..1257409 /locus_tag="B565_1142" /note="glycine loop; other site" /db_xref="CDD:153087" gene 1257554..1257937 /locus_tag="B565_1143" /db_xref="GeneID:10487060" CDS 1257554..1257937 /locus_tag="B565_1143" /codon_start=1 /transl_table=11 /product="endoribonuclease L-PSP" /protein_id="YP_004391795.1" /db_xref="GI:330828843" /db_xref="GeneID:10487060" /translation="MRQVITTKAAPGAIGPYVQATRIGNILYTSGQIPLDPVSGDIAE GIEAQTLRSLQNVKAIVEAAGGEVRNIFKTTVFVSDLNDFAAVNRVYNDFFTEHDAMY PARSCVEVARLPKDVKIEIEAIAAL" misc_feature 1257602..1257928 /locus_tag="B565_1143" /note="YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no...; Region: YjgF_YER057c_UK114_family; cd00448" /db_xref="CDD:100004" misc_feature order(1257602..1257607,1257614..1257616,1257620..1257622, 1257629..1257631,1257635..1257637,1257641..1257646, 1257761..1257763,1257767..1257772,1257776..1257778, 1257782..1257784,1257815..1257817,1257824..1257826, 1257860..1257883,1257911..1257913,1257917..1257919, 1257923..1257925) /locus_tag="B565_1143" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100004" misc_feature order(1257602..1257604,1257803..1257805,1257815..1257817, 1257866..1257868,1257911..1257913) /locus_tag="B565_1143" /note="putative active site [active]" /db_xref="CDD:100004" gene complement(1258018..1259229) /locus_tag="B565_1144" /db_xref="GeneID:10487061" CDS complement(1258018..1259229) /locus_tag="B565_1144" /codon_start=1 /transl_table=11 /product="tRNA and rRNA cytosine-C5-methylase" /protein_id="YP_004391796.1" /db_xref="GI:330828844" /db_xref="GeneID:10487061" /translation="MLKSPLLPRFGDLVVAIVDDVLGQGLTLDRAYARHFSGIELKPQ EQARIALVTGDLLRRLSLYCFLTGIQVRQAEKNVWPLLHSWHAFHKIAQPNNPTLDRF NEEAFRRRLTEAKKNPVLMDGCPSWLEKLGSEQLGEAWPAERAALAWMPKRYLRVNTL KCTRDELQAMLAKEQVTTIPVEAVETALQVTSDAALFRTKAFADGCFEQQDAGSQLVA AALEVAPGMRVIDACAGAGGKTLHIAAMMQGKGRLLAMDVEEWKLENLKQRARRAGAH NVETRVITSSKTVKRLKESADRVLLDVPCSGLGVLKRNPDAKWRDTAERLPVLVALQE EILQRYSQMVKVGGLLVYATCSILPEENRQQVDKFLAANENFRLRDDHTVSPSETGFD GFYMARIERIA" misc_feature complement(1258024..>1258857) /locus_tag="B565_1144" /note="16S rRNA methyltransferase B; Provisional; Region: PRK14902" /db_xref="CDD:184895" misc_feature complement(1258174..1258548) /locus_tag="B565_1144" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(1258324..1258326,1258375..1258383, 1258456..1258461,1258516..1258536)) /locus_tag="B565_1144" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 1259445..1261463 /locus_tag="B565_1145" /db_xref="GeneID:10487062" CDS 1259445..1261463 /locus_tag="B565_1145" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391797.1" /db_xref="GI:330828845" /db_xref="GeneID:10487062" /translation="MHVTSKCSLALVVASLLGSTSLMASEWSTVAARATAEQGYEVRA NQFRVAKVPLDYFAGLQAGASELTLPLPDGGEVTFALEAYDVLPADLAAKYPQIRTFK GHNPAHPIETGRFDLGPQGFHAMFSHQGRMVFVDPLRNAEGYAVYYQQDAHSRLEEAA DEVIGPKLSKLVRKVQVDGNVRKRYVIAISATGEFTQYHGGSKALTMAAIATLLNRVN QVYQRDVGAEFVLASGNDNLIFTDPVTDPFYNGYNPNYVNNVSSIYEANDANKNVLVQ ANYFTNMQLGNFDVGHVLNTGSGGLAGLAVLCTNQKSGGMSGSPTPVGDAFFVDYVAH EIGHQFGADHTFNGTTGSCGAGTRVASQAYEPGSGSSIMAYAGICGDENIQTHSDPYF HSKSIEQMRAHMATVSTCGTTLALSNNAPQAAAGGDYVIPANTAFMLKGAGGDLDNDS LLYNWEQIDLGTESSSAATMIDDGSRPLFRFVSPTASPERILPSLPSLLSGTLAKGEA WPSTNRDLNFRLTVRDGQGGVASDDMKVQVVNTGTAFRITNPFYGVTLTPGASQAVAW DVAGTTVAPISCSKVDISVTQDEGVSWTMLAAGQPNNGAATVTLPADLTSSVRLKVAC SDNIFFAISPLKLPLVQGGSTSGGGGGGGALGLWTLALALLGWQRRRT" misc_feature <1260324..1260647 /locus_tag="B565_1145" /note="Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families...; Region: ZnMc; cl00064" /db_xref="CDD:189057" misc_feature order(1260444..1260449,1260456..1260458,1260474..1260476) /locus_tag="B565_1145" /note="active site" /db_xref="CDD:58567" misc_feature 1261080..1261343 /locus_tag="B565_1145" /note="Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family; Region: GPI-anchored; pfam10342" /db_xref="CDD:192541" gene 1261460..1261789 /locus_tag="B565_1146" /db_xref="GeneID:10487063" CDS 1261460..1261789 /locus_tag="B565_1146" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391798.1" /db_xref="GI:330828846" /db_xref="GeneID:10487063" /translation="MKGVPLLLLVMLGGCQADASTLEQELSANLARQDYRLIVIAGRG EFAPGIAAEQQAEAKARCGKRYLDGLGDVIRPGQQEIHAKLSAYASEYNQRMVIYCPI ASGADKQ" gene 1262041..1264005 /locus_tag="B565_1147" /db_xref="GeneID:10487064" CDS 1262041..1264005 /locus_tag="B565_1147" /codon_start=1 /transl_table=11 /product="PPE-repeat-containing protein" /protein_id="YP_004391799.1" /db_xref="GI:330828847" /db_xref="GeneID:10487064" /translation="MKHGIAVIITSLSIQVAAEPQWTFMDENLARGGVYDVRAEKVRV VVPDKPFEPGHLASVLTLPLPDGTTVQFDVHPNALLPEPLAQRYPSINTYSGKAIDRA ADTGRFDVTIHGFHGMFTHQGRTFYVDPLQDGFSYAVYEQQDAWRRQDVDQVIDPHGI ERERAVLVDGNLRKRYTIAISATGEYTQYHGGTKVAALSAIATLLNRVNEVYRRDVGA EFQLAADTDNVIFTDPATDPFTNSTQDIAINQTQQGVLLNPSFDVGHLLATSGGGVAT LRSLCNPFSRSRGMTGGSQPIGDAFFIDYVAHELGHQLGAEHSFNGMADSCATGRKAS SAWEPGSGSTIMAYAGICGEENLQVYSTPFFHSKSIEQMRALMASLPSCGTDLALANN APVVDAGGDRVIPANTPFTLVGSALDLDGHPLSYTWEQVDLGNASYSVATMVDDGTRP LFRFVSPTSDPRRTLPAMSSLISGVLAKGEAWPATNRNLQFRLTVRDGQGAVSSDEMV VQVINTGAAFAITAPQIGAMVAGSTQLVTWNVAGTDQPPINCPSVDLALTQNGGSTWT TLASGLANNGSASVVLPAPLTSTARLKLACSNNIFFSINGIRGNASATTESATVITDN NAGGGGGGGAVNLIVILLMGGAAGWRRYYG" misc_feature 1262572..1263087 /locus_tag="B565_1147" /note="Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families...; Region: ZnMc; cl00064" /db_xref="CDD:189057" misc_feature order(1262962..1262967,1262974..1262976,1262992..1262994) /locus_tag="B565_1147" /note="active site" /db_xref="CDD:58567" misc_feature 1263598..1263855 /locus_tag="B565_1147" /note="Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family; Region: GPI-anchored; pfam10342" /db_xref="CDD:192541" gene 1264047..1264322 /locus_tag="B565_1148" /db_xref="GeneID:10487065" CDS 1264047..1264322 /locus_tag="B565_1148" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391800.1" /db_xref="GI:330828848" /db_xref="GeneID:10487065" /translation="MAASLTEAIDESLAAQDYRLIVRGGRGGMAPGVVESLQAEARTR CGVRYLKGFGDVIEMGKELEFEQRIDYATRYNRQMLERCMPEAISRP" gene 1264628..1266817 /locus_tag="B565_1149" /db_xref="GeneID:10487066" CDS 1264628..1266817 /locus_tag="B565_1149" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391801.1" /db_xref="GI:330828849" /db_xref="GeneID:10487066" /translation="MMKFTINAISVVIAMSANIALASPWHMVEAHNRQAADTVTTSAY TSFKVDEEFIQNLRAGDTLITLPLPNGGMVQFEVQPSSVLPPALAAKYPDIMTFKGHE VGNENNTGSFDISPRGFNGMFMHQGEQVFIDVQRSGLYSVYYKKNVKPRKNGHHEELM QNNTSEYESGKKRLLLDSATKQAAQKYNFPGIKTYRIAISTTGEYTTSFHGKIGALSS IVTLLARVNEIYERDLGIKFILADGNDNIIFDDPDKDQFFNGYNKDRTFTTPTIDRDD AHRNELVQLLAQREADPAKKLGEFDIGHVLMTTNYSGLAWGTLCAAPNLDYFGNQSPG RNLRSNAMSGAGNGSSGAGIAEIDAMFVDTFAHEVGHQLGAEHIFNVNTGGRVANSAW EVGSGTTIMGYPGRAGMGSQNLQSKTTGYFHSKSIDQMRAVLANRPDNCGAVEPMIKQ DIDVNISPASQSKVIPVRTAFSLTGIGFGEDGMTFTWEQVDIGRATESASDIYYGKLS DGPLYRFVAPTTSPERHFPSLATQLRGYERFMLQQPELIKDEEKGDPWVNVPRTLNFR LVARDGKGGGAYDETSVEVVDTGSQTFKILPAPDQRILVGSPTTVNWQVAGTDGGRIN CQRVDISYSNDEGKSWQPLVNGVNNNGAHEVTIPANVGSAVRLKLACSDNIFYAITPK LATKSSNTPAPQPESNGGGGGGGSTGLFALLGLGIAALLRRRETMSY" misc_feature <1265717..1265836 /locus_tag="B565_1149" /note="Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families...; Region: ZnMc; cl00064" /db_xref="CDD:189057" misc_feature order(1265726..1265731,1265738..1265740,1265756..1265758) /locus_tag="B565_1149" /note="active site" /db_xref="CDD:58567" misc_feature 1266416..1266667 /locus_tag="B565_1149" /note="Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family; Region: GPI-anchored; pfam10342" /db_xref="CDD:192541" gene 1266994..1267632 /locus_tag="B565_1150" /db_xref="GeneID:10487067" CDS 1266994..1267632 /locus_tag="B565_1150" /codon_start=1 /transl_table=11 /product="pyridoxine/pyridoxamine 5'-phosphate oxidase" /protein_id="YP_004391802.1" /db_xref="GI:330828850" /db_xref="GeneID:10487067" /translation="MMDVADLRREYSRGGLHRADLPAEPLALFEKWLAQACEAKLTDP TAMVVATVDADGQPWQRTVLLKHYDAQGMVFYTNMGSRKAQQLEGNPRISLLFPWHTL DRQVHVTGRVEKMSTFEVMKYFHSRPKDSQIAAWVSKQSTRISARGVLEAKFLELKQK FANGEVPLPSFWGGFRVVIETVEFWQGGEHRLHDRFYYTREGDGWHIERLAP" misc_feature 1267045..1267629 /locus_tag="B565_1150" /note="pyridoxamine 5'-phosphate oxidase; Provisional; Region: PRK05679" /db_xref="CDD:180195" misc_feature 1267096..1267341 /locus_tag="B565_1150" /note="Pyridoxine 5'-phosphate (PNP) oxidase-like proteins; Region: PNPOx_like; cl00381" /db_xref="CDD:193794" misc_feature 1267507..1267629 /locus_tag="B565_1150" /note="Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; Region: PNPOx_C; pfam10590" /db_xref="CDD:192638" gene 1267669..1268283 /locus_tag="B565_1151" /db_xref="GeneID:10487068" CDS 1267669..1268283 /locus_tag="B565_1151" /codon_start=1 /transl_table=11 /product="glutathione S-transferase family protein" /protein_id="YP_004391803.1" /db_xref="GI:330828851" /db_xref="GeneID:10487068" /translation="MRLYGDLRSGNCYKVWLLARWLELPLEWVEVDIQAGDTRTPAFL AKNPNGKIPVLEIGQGDALAESNAILFYLGQGSALWPTDPRQQAEVLKWMFFEQYSHE PYIAVARFIVHYLGRPESQEARLDGLKAGGEKALAVMEQQLKQSSYLCGDAPTIADIA LYAYTHVAEEGIFSLQGWPAIRSWIARIEAHPRHLTLPAACQVS" misc_feature 1267669..1268268 /locus_tag="B565_1151" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: Gst; COG0625" /db_xref="CDD:30970" misc_feature 1267669..1267890 /locus_tag="B565_1151" /note="GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of...; Region: GST_N_4; cd03056" /db_xref="CDD:48605" misc_feature order(1267699..1267701,1267705..1267710,1267714..1267719, 1267726..1267731,1267867..1267869,1267876..1267881) /locus_tag="B565_1151" /note="putative C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48605" misc_feature order(1267699..1267701,1267819..1267827,1267861..1267866) /locus_tag="B565_1151" /note="putative GSH binding site (G-site) [chemical binding]; other site" /db_xref="CDD:48605" misc_feature order(1267819..1267821,1267858..1267863,1267867..1267872, 1267879..1267881) /locus_tag="B565_1151" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:48605" misc_feature 1267924..1268235 /locus_tag="B565_1151" /note="GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of...; Region: GST_C_1; cd03179" /db_xref="CDD:48106" misc_feature order(1267939..1267941,1267960..1267962,1268134..1268136, 1268143..1268148,1268155..1268157,1268167..1268169) /locus_tag="B565_1151" /note="putative N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48106" misc_feature order(1267939..1267944,1267951..1267953,1268080..1268082) /locus_tag="B565_1151" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:48106" misc_feature order(1267960..1267962,1267972..1267977,1267984..1267989, 1268158..1268160,1268167..1268169) /locus_tag="B565_1151" /note="putative substrate binding pocket (H-site) [chemical binding]; other site" /db_xref="CDD:48106" gene 1268283..1269935 /locus_tag="B565_1152" /db_xref="GeneID:10487069" CDS 1268283..1269935 /locus_tag="B565_1152" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391804.1" /db_xref="GI:330828852" /db_xref="GeneID:10487069" /translation="MELLIEASLWQPQWAALLLHWQQQGHRWQLLLGKEAAAALDQTD APWASSPPDGVLCPGALLAAWLDGDLLADFHVDPSRQILISASTSLLTLAREQGLLTL GPVGADLPLTPEADLGAVLNRLLARRVTVPTLAEGHLLSGVVLRPLQAADEREDECEI VRYCSDEALARYTLNIPHPYPPEGARDWLALSWRKVALGLGWSWAITMPEEQGAALLG VISLHWNGELAWWVGVPWQNRGLATRAASLVKAFAFDQLQLPALTARHMPDNLASGRV MAKLGMHYRGRRHISGRQPCEVSYWRLDRAHSLPNPLSEEISRWLADERIAVVILCDP ATTNRQSANGKLAISLFVDERGAGEEPCFLRCSPHLERLLALHCYPVDLLEQAEPEQL SHLGGVLLKDRDEQGLAWLLQLAALQRQGPDLLSREERASRLHWFNQLMAQALGDQSD SSQIRYQQLRLLVELPELVDELDGCWHQTPELTFDRLVREAPALWFAYREAMNRVTPA TLTALQQQFAARFPECTLPFLDKGTQNDQPLCGIMPALLYEE" misc_feature 1268709..1269200 /locus_tag="B565_1152" /note="Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]; Region: RimL; COG1670" /db_xref="CDD:31856" gene 1269942..1270481 /locus_tag="B565_1153" /db_xref="GeneID:10487070" CDS 1269942..1270481 /locus_tag="B565_1153" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004391805.1" /db_xref="GI:330828853" /db_xref="GeneID:10487070" /translation="MLRTERPGDMLPVYELLSAAFGRSDEAELVNRLRECGAAVVTMV EEEEYEFMGHLMLSPITINGMEGPWLGLAPVAVHPDWQGQGIGSDLIREGLDTALEMD WKGVVVLGDPVYYSRFGFRPASEFGLHCIYEVPADCFMAMELQERGFAGVQGEVLYHP LFDELPDELPDAQAEVSHL" misc_feature 1269945..1270430 /locus_tag="B565_1153" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(1270578..1270991) /locus_tag="B565_1154" /db_xref="GeneID:10487071" CDS complement(1270578..1270991) /locus_tag="B565_1154" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391806.1" /db_xref="GI:330828854" /db_xref="GeneID:10487071" /translation="MQITSKLMPLPDYGKYPSSPAVTPEQVSQARNEALTKKDESQAQ SEEKATARRTLAVSYTANQQDKAVVERYLEASGQESDSKSGPSTADMYQAANRYQRQQ NLSDYMQFQQSPLAQQMGDMVGEDNRKGTQLDIIA" gene complement(1271174..1272304) /locus_tag="B565_1155" /db_xref="GeneID:10487072" CDS complement(1271174..1272304) /locus_tag="B565_1155" /codon_start=1 /transl_table=11 /product="Cupin superfamily protein" /protein_id="YP_004391807.1" /db_xref="GI:330828855" /db_xref="GeneID:10487072" /translation="MYELNLDIAHFLEHYWQKRPLLIKGGFKDFQDPISPDELAGLAM EEVVESRLVTRFDGKWDAAHGPFESYDHLGEENWTILVQACNHWAPEVNELAVPFQFI PGWRFDDVMVSFSTPHAGVGPHIDNYDVFITQGLGKRHWRVGDAKPLNEFAAHAALLH CEPFEAIIDVIMEPGDILYIPPGFPHEGYAIEPSMNFSVGFRAPDAKALISSFADHLI DNEVRTERYGDADLKPRARHGEIQPHELHRLRELMQQALDDETLFKEWFGTMISEAKH DLDVNPVEPDYSAEEVADLLTQGEPAIKVPGLRTVWFSGESQQCFIDGEAWTLQSEDA AAISLLCDKDIITQADMVELADQAGFLQLLTRLVNRGYWFFN" misc_feature complement(1271177..1272301) /locus_tag="B565_1155" /note="Uncharacterized conserved protein [Function unknown]; Region: COG2850" /db_xref="CDD:32678" gene complement(1272444..1273814) /locus_tag="B565_1156" /db_xref="GeneID:10487073" CDS complement(1272444..1273814) /locus_tag="B565_1156" /codon_start=1 /transl_table=11 /product="adenylosuccinate lyase" /protein_id="YP_004391808.1" /db_xref="GI:330828856" /db_xref="GeneID:10487073" /translation="MELSALTAVSPIDGRYGDKADALRPIFSEFGLLRFRVEVEVRWL QKLASHAGIPEVPALSAAANALLDGIVSNFNESDAARIKQIERTTNHDVKAVEYFLKE KVEVNPELAAVSEFIHFACTSEDINNNSHGLMLKTAREEVIKPYCEKLISELKRLAHD YRDMPLLSRTHGQPATPSTMGKEMANVAYRLERQFKQIMAVEILGKINGAVGNYNAHL SAYPDVDWHQFSEEFVTSLGLTWNPYTTQIEPHDYIAELFDAMARFNTILIDFDRDVW GYISLGHFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGLANAVFQHLASKLPISRWQ RDLTDSTVLRNLGVAVGYSLIAYQATLKGISKLEANDAAMAADLDANWEVLAEPIQTV MRRYGIEKPYEKLKELTRGRRVDAEGMRTFIDTLELPEAVKVELKKLTPANYIGDAQR LVDLLK" misc_feature complement(1272447..1273814) /locus_tag="B565_1156" /note="adenylosuccinate lyase; Provisional; Region: PRK09285" /db_xref="CDD:181757" misc_feature complement(1272477..1273748) /locus_tag="B565_1156" /note="PurB_like adenylosuccinases (adenylsuccinate lyase, ASL); Region: PurB; cd01598" /db_xref="CDD:176470" misc_feature complement(order(1272480..1272482,1272768..1272770, 1272783..1272785,1272789..1272794,1272804..1272824, 1272834..1272839,1272846..1272851,1272858..1272863, 1272867..1272872,1272879..1272881,1272891..1272893, 1272906..1272911,1272975..1272980,1272984..1272989, 1272993..1272995,1273005..1273007,1273026..1273028, 1273047..1273049,1273059..1273061,1273080..1273085, 1273089..1273091,1273158..1273160,1273167..1273178, 1273224..1273229,1273245..1273250,1273257..1273259, 1273266..1273271,1273287..1273289,1273293..1273310, 1273455..1273460,1273464..1273469,1273512..1273514, 1273539..1273541,1273728..1273733)) /locus_tag="B565_1156" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:176470" misc_feature complement(order(1272891..1272893,1272906..1272908, 1272912..1272914,1273074..1273076,1273302..1273304, 1273461..1273463,1273542..1273544)) /locus_tag="B565_1156" /note="active site" /db_xref="CDD:176470" gene complement(1273945..1274559) /locus_tag="B565_1157" /db_xref="GeneID:10487074" CDS complement(1273945..1274559) /locus_tag="B565_1157" /codon_start=1 /transl_table=11 /product="High frequency lysogenization protein hflD" /protein_id="YP_004391809.1" /db_xref="GI:330828857" /db_xref="GeneID:10487074" /translation="MSDKFQDRTMAFAGICQAAYLVQKVARDGSCDEAALRESLSSIL VTNPSQPLEVFNNTHLAIRDGYRALVEQLGADGSQKNAELTRYVVSLIALERKLAKRK DILNMLGERISQIGRQQQHFDLLDEQILANMASIYSDLISPIGPRIQVAGTPLFLQQP LVQHKVRALLLAGIRACVLWRQLGGSRTQIIFARKKMVELAKRY" misc_feature complement(1273951..1274559) /locus_tag="B565_1157" /note="Protein of unknown function (DUF489); Region: DUF489; cl01097" /db_xref="CDD:194034" gene complement(1274583..1275689) /locus_tag="B565_1158" /db_xref="GeneID:10487075" CDS complement(1274583..1275689) /locus_tag="B565_1158" /codon_start=1 /transl_table=11 /product="putative tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase" /protein_id="YP_004391810.1" /db_xref="GI:330828858" /db_xref="GeneID:10487075" /translation="MTDNSQIKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEED DTDEYCSAAQDLADAKAVCDKLGMKLHTINFAAEYWDNVFEHFLEEYKAGRTPNPDIL CNKEIKFKAFLEFAAEELGATYIATGHYVRRDDSTGRPRLLRGLDTNKDQSYFLYTLS EKQVGQSLFPVGDLEKPEVRRIAEQLDLITAKKKDSTGICFIGERKFKDFLAKFLPAQ PGKIETVDGKVIGEHQGLMYHTLGQRKGLGIGGRKDATEEAWYVVDKEVERNVLVVAQ GEHPRLYSDGLIASQLHWVDRTPIREPRRCTVKTRYRQQDIPCLIQPIDDETIRVIFD EKQAAVTPGQSAVFYDGEVCLGGGIIEQRFSHPV" misc_feature complement(1274610..1275623) /locus_tag="B565_1158" /note="tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble position of some tRNAs...; Region: tRNA_Me_trans; cd01998" /db_xref="CDD:30185" misc_feature complement(1274610..1275623) /locus_tag="B565_1158" /note="tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Region: trmU; TIGR00420" /db_xref="CDD:161871" gene complement(1275847..1276338) /locus_tag="B565_1159" /db_xref="GeneID:10487076" CDS complement(1275847..1276338) /locus_tag="B565_1159" /codon_start=1 /transl_table=11 /product="MutT/nudix family protein" /protein_id="YP_004391811.1" /db_xref="GI:330828859" /db_xref="GeneID:10487076" /translation="MSNQAEQSTTSHARMEARLTVAALVQWQGRFLVVEEEIKGQRRF NQPAGHVEPGENLLEAACRELKEETGLTAMPTAWLGTYLFKPADSEATYVRTAIIFDL EKAPGQHHPEDPDGDVLACHWLTLEEIAECKPALRSPLVWQCIQDYLAGTRLPLSALK AFI" misc_feature complement(1275874..1276284) /locus_tag="B565_1159" /note="Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function. In general, members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X...; Region: Nudix_Hydrolase_2; cd03675" /db_xref="CDD:72895" misc_feature complement(1276126..1276194) /locus_tag="B565_1159" /note="nudix motif; other site" /db_xref="CDD:72895" gene complement(1276338..1277261) /locus_tag="B565_1160" /db_xref="GeneID:10487077" CDS complement(1276338..1277261) /locus_tag="B565_1160" /codon_start=1 /transl_table=11 /product="ribosomal large subunit pseudouridine synthase E" /protein_id="YP_004391812.1" /db_xref="GI:330828860" /db_xref="GeneID:10487077" /translation="MKSPRSRLSVSRAPRDNAPRTAAKPAAPRHASPRKPELAPEDRK LLLLNKPYMVLCQFTDEAGRETLKDYIKEPGIYAAGRLDRDSEGLLLLTNDGKLQARL TQPGEKTPKTYWVQVEGIPSEEKLAALRAGVELNDGMTLPAGARIMDEPAVWPRNPPI RERKEIPTSWLEIKIIEGRNRQVRRMTAHIGHPTLRLIRYAIGDWTLDGLAPGESRSL PAPELTPSSSRSPRPASSRSGAHTAKPAKPAGDAPRRASQPRQDERPRSTHPTERAAT NPTGGKHRSSGRGTARRPARAGNPNSNDKES" misc_feature complement(1276632..1277129) /locus_tag="B565_1160" /note="PseudoU_synth: Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). Pseudouridine synthases contains the RsuA/RluD, TruA, TruB and TruD families. This group consists of...; Region: PseudoU_synth; cl00130" /db_xref="CDD:193668" misc_feature complement(order(1276710..1276712,1277013..1277024)) /locus_tag="B565_1160" /note="active site" /db_xref="CDD:73252" gene complement(1277366..1278133) /locus_tag="B565_1161" /db_xref="GeneID:10487078" CDS complement(1277366..1278133) /locus_tag="B565_1161" /codon_start=1 /transl_table=11 /product="PTS system, fructose-specific IIA component" /protein_id="YP_004391813.1" /db_xref="GI:330828861" /db_xref="GeneID:10487078" /translation="MLTREITFYCQQGLSITQAKQLNRLAGMFKSTIRCANLTRRQTV AASNQLSLLTLATQPGDLCQLQIEGCDAELAHMAFTCWCGELGQPLVRPRTAALAELR LVNALPDYHFALRQLAHSTEPLTKAEALEHLIDLLPAELITDCATLTAAVERREQVSA TIIRPGLAMPHVLSEGISQPALTLLNCKEPIEWGSQIGPVQTIILLAVPVGSGRETLR PLTRLAQAMIDDVVSHALLQAGSAPARQAIVIESLLS" misc_feature complement(1277894..1278100) /locus_tag="B565_1161" /note="Histidine-containing phosphocarrier protein (HPr)-like proteins. HPr is a central component of the bacterial phosphoenolpyruvate sugar phosphotransferase system (PTS). The PTS catalyses the phosphorylation of sugar substrates during their translocation...; Region: PTS-HPr_like; cd00367" /db_xref="CDD:29444" misc_feature complement(order(1277972..1277977,1277984..1277995, 1278053..1278055,1278062..1278064,1278074..1278079, 1278083..1278088,1278092..1278094)) /locus_tag="B565_1161" /note="regulatory protein interface [polypeptide binding]; other site" /db_xref="CDD:29444" misc_feature complement(1278089..1278091) /locus_tag="B565_1161" /note="active site" /db_xref="CDD:29444" misc_feature complement(1277990..1277992) /locus_tag="B565_1161" /note="regulatory phosphorylation site [posttranslational modification]; other site" /db_xref="CDD:29444" misc_feature complement(1277408..1277761) /locus_tag="B565_1161" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cd00211" /db_xref="CDD:29266" misc_feature complement(order(1277621..1277623,1277669..1277671)) /locus_tag="B565_1161" /note="active site" /db_xref="CDD:29266" misc_feature complement(1277621..1277623) /locus_tag="B565_1161" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29266" gene complement(1278133..1278438) /locus_tag="B565_1162" /db_xref="GeneID:10487079" CDS complement(1278133..1278438) /locus_tag="B565_1162" /codon_start=1 /transl_table=11 /product="phosphotransferase system enzyme II , fructose-specific" /protein_id="YP_004391814.1" /db_xref="GI:330828862" /db_xref="GeneID:10487079" /translation="MKIVAVTACPTGIAHTYMAADALQKAATGLGLKIKVETQGAMGM ENMLTARDIASADLVLIASDIEIEQKERFLGCTIHQVRLETVLLDANAVLKALPIPA" misc_feature complement(1278151..1278432) /locus_tag="B565_1162" /note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII (also referred to as FruAB) is a fructose-specific permease made up of two proteins (FruA...; Region: PTS_IIB_fructose; cd05569" /db_xref="CDD:99911" misc_feature complement(order(1278391..1278399,1278403..1278414)) /locus_tag="B565_1162" /note="P-loop; other site" /db_xref="CDD:99911" misc_feature complement(order(1278391..1278396,1278403..1278408, 1278412..1278414)) /locus_tag="B565_1162" /note="active site" /db_xref="CDD:99911" misc_feature complement(1278412..1278414) /locus_tag="B565_1162" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99911" gene complement(1278658..1280064) /locus_tag="B565_1163" /db_xref="GeneID:10487080" CDS complement(1278658..1280064) /locus_tag="B565_1163" /codon_start=1 /transl_table=11 /product="Hexose phosphate transport protein" /protein_id="YP_004391815.1" /db_xref="GI:330828863" /db_xref="GeneID:10487080" /translation="MLKLLQQVRVPTLDLPVEARRKLWFKPFMQSYLVVFIGYLTMYL IRKNFNIAQNDMIQEYGLSMTELGMIGLGFSITYGVGKTIVSYYADGKNTKQFLPLML ILSALCMLGFSASMGGTGFSLYFMIFFYALSGFFQSCGGSCSYSTITKWTPRNKRGTY LGMWNLSHNVGGAGAAGVALFGANYLFDGNVLGMFIFPSIIALIVGFIGLRFGSDSPE AYGLGKVEELFDEVASEEDIATEEQQLTKWQIFVKYVLLNKVIWLLCFANIFLYVVRI GIDQWSTVYAHQELGFSKDVAIQGFTFFEVGALVGTLMWGYLSDLANGRRGLVACVAL ALIIATLGLYQHATTQFMFLGSLFTLGFLVFGPQLLIGVAAVGFVPKQGISVADGVKG TFAYLIGDSFAKLGLGMIADGTPIFGLTGWTGTFAALDIAAAACLVLMGCVAVAEERK IRRIKRELKAAELAAQTA" misc_feature complement(1278730..1280061) /locus_tag="B565_1163" /note="sugar phosphate antiporter; Reviewed; Region: uhpT; PRK09556" /db_xref="CDD:181950" misc_feature complement(1278868..1279968) /locus_tag="B565_1163" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature complement(order(1278868..1278870,1278877..1278882, 1278889..1278894,1278901..1278906,1278937..1278939, 1278946..1278951,1278961..1278963,1278970..1278975, 1278982..1278984,1279129..1279131,1279141..1279143, 1279150..1279152,1279162..1279164,1279174..1279176, 1279216..1279218,1279225..1279230,1279237..1279242, 1279249..1279251,1279549..1279551,1279567..1279572, 1279579..1279584,1279618..1279620,1279627..1279632, 1279639..1279644,1279651..1279656,1279807..1279812, 1279816..1279821,1279831..1279833,1279840..1279845, 1279852..1279854,1279903..1279908,1279912..1279920, 1279927..1279929)) /locus_tag="B565_1163" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene complement(1280654..1282561) /locus_tag="B565_1164" /db_xref="GeneID:10487081" CDS complement(1280654..1282561) /locus_tag="B565_1164" /codon_start=1 /transl_table=11 /product="phosphotransferase system fructose-specific" /protein_id="YP_004391816.1" /db_xref="GI:330828864" /db_xref="GeneID:10487081" /translation="MITTLINEHLINLDLKATRKEEVFTEMARLLASQGKVSDEQAFI KDLWAREELGNTGFEDGVALPHAKSAAVCNPAVAIGISRNGIEYGAEDGKPSHIFFMI ASPDGGANHHIEVLAELSGKLIEEGFIAKLLAANTPADALALLLAKKEEQSAAPTTSK GFIIGVTGCPAGIAHTYLAAESLERAAKELGYEVKVETNGSIGVKNSPTADEIARASA IVVACDKQVDMARFNGKPLIKTGVKAPIKDGKGLIEQALKAPAYVAGKEDKKGEEKSA GGSSDLYRYLMNGVSHMIPFVVTGGLLIALALAIGGNPTPSGMQIPEGSMWNQILNVG VAAFTLMIPILAGYIAYAIGDRPALAPGFIGGWIANNGSFYGADAGTGFIGAIIAGLL VGYLVRWIATRQYHKMVQPLVPILIAPIVGSLFIAAVFIFIIGAPIADMMTGLNAMLL SMSGGSLVLLGIVLGGMAGFDMGGPVNKVAFLFSVGMIASGQTQFMGAMACAIPAAPL GMSLATVLGRKLGIFDESEIEAGKAAGAMGLVGISEGAIPFAARDPLAVIPANVLGSM TAAVMAFLFGITNSVAHGGPIVALLGAVNKPLLALLCMICGAIVTGVVAVALKKLRVK KSDEVTLAKAA" misc_feature complement(1280807..1282558) /locus_tag="B565_1164" /note="PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional; Region: PRK09765" /db_xref="CDD:182066" misc_feature complement(1282169..1282546) /locus_tag="B565_1164" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cd00211" /db_xref="CDD:29266" misc_feature complement(order(1282364..1282366,1282412..1282414)) /locus_tag="B565_1164" /note="active site" /db_xref="CDD:29266" misc_feature complement(1282364..1282366) /locus_tag="B565_1164" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29266" misc_feature complement(1281788..1282075) /locus_tag="B565_1164" /note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII (also referred to as FruAB) is a fructose-specific permease made up of two proteins (FruA...; Region: PTS_IIB_fructose; cd05569" /db_xref="CDD:99911" misc_feature complement(order(1282034..1282042,1282046..1282057)) /locus_tag="B565_1164" /note="P-loop; other site" /db_xref="CDD:99911" misc_feature complement(order(1282034..1282039,1282046..1282051, 1282055..1282057)) /locus_tag="B565_1164" /note="active site" /db_xref="CDD:99911" misc_feature complement(1282055..1282057) /locus_tag="B565_1164" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99911" misc_feature complement(1280726..1281721) /locus_tag="B565_1164" /note="Phosphotransferase system, EIIC; Region: PTS_EIIC; cl00557" /db_xref="CDD:186079" gene 1283320..1283823 /locus_tag="B565_1165" /db_xref="GeneID:10487082" CDS 1283320..1283823 /locus_tag="B565_1165" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391817.1" /db_xref="GI:330828865" /db_xref="GeneID:10487082" /translation="MTIITAIPMNDDHIAGHFAKAERFVFVDEQGSTLAEIANPVAGN ECKSVLAELLQAQGARRIVLKNIGSKMLGKLLGSGLAVYQASQGRLAMADMLSNESGH LTELTSAEQGSASRCAEGAGHHGKGSRQCAPRGRLGKGGCCKSASGQQQGCQGNRQRN HKKCCEE" misc_feature 1283320..1283598 /locus_tag="B565_1165" /note="This CD represents a family of iron-molybdenum cluster-binding proteins that includes NifB, NifX, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme; Region: NifX_NifB; cl00252" /db_xref="CDD:153627" gene 1283859..1284845 /locus_tag="B565_1166" /db_xref="GeneID:10487083" CDS 1283859..1284845 /locus_tag="B565_1166" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate transporter/malic acid transport protein" /protein_id="YP_004391818.1" /db_xref="GI:330828866" /db_xref="GeneID:10487083" /translation="MENLNQEGKQIPSITKIAHMPVTLFSIIMGLTGAAIACRKAFPD LLLLQSAGFLFGVLSSLLLVTFLVMYGWKILRHNDEFLHELKHPVRINFFPTISISLL LQSAYWASWHDAALALWSAGASLQLLFTLYIMSNWIHRDHFTITHTNPAWFIPIVGNI VVPLGGVPLGFHEISLFFFSIGLIFWFSLLTIVLYRLFFHESLPEKLMPTMFILLAPP SIGFISYSEIASSSDLFAHVIYYFALFVFILLMYNTLTFLKLKFFLSSWAYSFPLAAF SAASAMFADATGNIIPYYLAKTVVCALIVLIIWLISMTVQSFYKGEIFTPEK" misc_feature 1283913..1284800 /locus_tag="B565_1166" /note="Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes SLAC1 (Slow Anion Channel-Associated 1); Region: TDT_SLAC1_like; cd09323" /db_xref="CDD:187763" misc_feature 1284669..1284671 /locus_tag="B565_1166" /note="gating phenylalanine in ion channel; other site" /db_xref="CDD:187763" gene 1284850..1285191 /locus_tag="B565_1167" /db_xref="GeneID:10487084" CDS 1284850..1285191 /locus_tag="B565_1167" /codon_start=1 /transl_table=11 /product="alkylhydroperoxidase-like protein" /protein_id="YP_004391819.1" /db_xref="GI:330828867" /db_xref="GeneID:10487084" /translation="MKNYREINKEQHQLGSAYRKSSPDTMNAFIALHKAVMKEDEALA LKYREMIALGIGIASRCDGCIAAHVAGAVKAGASRAELIATVDVAVLMGGGPSIIYGT QAHAAIEELLS" misc_feature 1284916..1285161 /locus_tag="B565_1167" /note="Carboxymuconolactone decarboxylase family; Region: CMD; cl00460" /db_xref="CDD:193827" gene 1285241..1285678 /locus_tag="B565_1168" /db_xref="GeneID:10487085" CDS 1285241..1285678 /locus_tag="B565_1168" /codon_start=1 /transl_table=11 /product="thioesterase superfamily protein" /protein_id="YP_004391820.1" /db_xref="GI:330828868" /db_xref="GeneID:10487085" /translation="MDEYQSENYQQTMMSHARCMVCGTHNPDSLGIRFYQGEEGTTEG LFIANQRHQGYSDILHGGMTSTLLDAVMTHALLQRGIRGLTAELTVRFIAPIDIGSKV ALSARIVDQRHGIYRLNAVASVGGMIVAKASAKFIKPKANNRS" misc_feature 1285328..1285651 /locus_tag="B565_1168" /note="PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not...; Region: PaaI_thioesterase; cd03443" /db_xref="CDD:48038" misc_feature order(1285415..1285417,1285493..1285495,1285514..1285525) /locus_tag="B565_1168" /note="CoenzymeA binding site [chemical binding]; other site" /db_xref="CDD:48038" misc_feature order(1285418..1285420,1285424..1285426,1285433..1285435, 1285496..1285510,1285514..1285516) /locus_tag="B565_1168" /note="subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:48038" misc_feature order(1285421..1285423,1285445..1285450,1285457..1285462, 1285493..1285495) /locus_tag="B565_1168" /note="PHB binding site; other site" /db_xref="CDD:48038" gene 1285680..1286174 /locus_tag="B565_1169" /db_xref="GeneID:10487086" CDS 1285680..1286174 /locus_tag="B565_1169" /codon_start=1 /transl_table=11 /product="DNA starvation/stationary phase protection protein Dps" /protein_id="YP_004391821.1" /db_xref="GI:330828869" /db_xref="GeneID:10487086" /translation="MMKKESVVLPEMDIGISAADRKKIADGLSALLADSYTLYLMTHN FHWNVTGPQFNSLHNMFMDQYTEQWTALDVIAERIRALGFPAPGTYKEFVRLSSIEEV EGVPCASEMLKHLVLAQEATARTARKLFDLVDAVNDQPTADVLTQRIDIHEKTAWMLR SMLS" misc_feature 1285752..1286171 /locus_tag="B565_1169" /note="Ferritin-like domain; Region: Ferritin; pfam00210" /db_xref="CDD:189451" misc_feature 1285755..1286168 /locus_tag="B565_1169" /note="DPS protein, ferritin-like diiron-binding domain; Region: DPS; cd01043" /db_xref="CDD:153102" misc_feature order(1285794..1285799,1285809..1285811,1285815..1285820, 1285851..1285853,1285884..1285886,1285896..1285898, 1285905..1285910) /locus_tag="B565_1169" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:153102" misc_feature order(1285815..1285817,1285851..1285853,1285863..1285865, 1285896..1285898,1285908..1285910) /locus_tag="B565_1169" /note="DPS ferroxidase diiron center [ion binding]; other site" /db_xref="CDD:153102" misc_feature order(1286094..1286096,1286115..1286120) /locus_tag="B565_1169" /note="ion pore; other site" /db_xref="CDD:153102" gene complement(1286590..1287342) /locus_tag="B565_1170" /db_xref="GeneID:10487087" CDS complement(1286590..1287342) /locus_tag="B565_1170" /codon_start=1 /transl_table=11 /product="putative choline kinase involved in LPS biosynthesis" /protein_id="YP_004391822.1" /db_xref="GI:330828870" /db_xref="GeneID:10487087" /translation="MGGASVNIQLLDGKPCIRKSGASPVERHFYQRAALHLSRLNTPA LLKVEGETLFLEQIPHPVTLTQLHHNEQTFAQLANLHNANYQPDFAVKTHGWSLVDTN EALSVLCLPEAVNEKIRHIQQVGHELFEESCLISGDSNEGNWGTRNNGELVLFDWERF GYGSPAIDLAPLVPRMGSRAEYETIIERYQRHSSLHSGDRLLRHLVMAKCWLIIEVTN LLTRREKPQAQQYLEWYRQQVPRWLESVAHIV" misc_feature complement(1286833..>1287015) /locus_tag="B565_1170" /note="Protein Kinases, catalytic domain; Region: PKc_like; cl09925" /db_xref="CDD:195926" misc_feature complement(1286629..>1286955) /locus_tag="B565_1170" /note="Predicted aminoglycoside phosphotransferase [General function prediction only]; Region: COG3173" /db_xref="CDD:32986" gene complement(1287378..1287893) /locus_tag="B565_1171" /db_xref="GeneID:10487088" CDS complement(1287378..1287893) /locus_tag="B565_1171" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391823.1" /db_xref="GI:330828871" /db_xref="GeneID:10487088" /translation="MKRILIIGNSGSGKSWLAARLAEQLTIREVNLDTIVWQPGGFNQ KRPQHEIDHAIQTLAQEPSWVVEGVFGALVEQLLDAADTLLSLDLDWSVCRDSLLSRG SQSARQRDAVAAEKNFQQLLVWASEYGQRAGKSSRHFHRELFDRFPNDKHHFTTREAV NSYLTQLTTHS" misc_feature complement(<1287678..1287893) /locus_tag="B565_1171" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" gene complement(1287915..1288466) /locus_tag="B565_1172" /db_xref="GeneID:10487089" CDS complement(1287915..1288466) /locus_tag="B565_1172" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="YP_004391824.1" /db_xref="GI:330828872" /db_xref="GeneID:10487089" /translation="MFKLETTHLILRDMQPTDEAAFVAISQESKYQRFYSESDCDPDK YRQLTRLFIEQASEHPRRSYQLAIEYKATGEFIGTVCLRLEANNQASMGCGMSREYQG HGLINEAAHALLDFGFRTLAVHRVYAETISRNRAARRLCKTLGMRQEGYFREHRFFKD QWWDTVVFAILQREWQQSSSPAN" misc_feature complement(1287936..1288466) /locus_tag="B565_1172" /note="Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]; Region: RimL; COG1670" /db_xref="CDD:31856" misc_feature complement(1287942..>1288193) /locus_tag="B565_1172" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(1288549..1289007) /locus_tag="B565_1173" /db_xref="GeneID:10487090" CDS complement(1288549..1289007) /locus_tag="B565_1173" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391825.1" /db_xref="GI:330828873" /db_xref="GeneID:10487090" /translation="MQTRKASPDELNAIFWMGFNAWGEGLSPTEYLASCHASQKYRSG VWYVLIVGNQPVSSLIVYRDLFGLGQGCFGIGSLATTPAMRGQGFGTHLLRGVTGMLL DSPDAVATFLHADIDHHFYERLGYRRIPGGDCMHFSHRLPRYVGEPPTYF" misc_feature complement(<1288723..1288872) /locus_tag="B565_1173" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cd04301" /db_xref="CDD:173926" misc_feature complement(1288627..>1288785) /locus_tag="B565_1173" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" misc_feature complement(order(1288735..1288740,1288768..1288776)) /locus_tag="B565_1173" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene complement(1289102..1289581) /locus_tag="B565_1174" /db_xref="GeneID:10487091" CDS complement(1289102..1289581) /locus_tag="B565_1174" /codon_start=1 /transl_table=11 /product="IAA acetyltransferase" /protein_id="YP_004391826.1" /db_xref="GI:330828874" /db_xref="GeneID:10487091" /translation="MKFVEMAPGQLPLALLLEADPAEQSIAAYLPGAWGFAALAGNEV VGACVAGLVGEQTAEIFNIAVAPNRQQQGIGSGLLRFVLTGLAGKGVCRVELGTGSFG HQLTYYQRHGFRVDGVVKDHFLIHYPEPLMEHGIQHKDMLRLYLELVYPQQPVAPWR" misc_feature complement(1289294..1289476) /locus_tag="B565_1174" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cd04301" /db_xref="CDD:173926" misc_feature complement(order(1289354..1289359,1289387..1289395)) /locus_tag="B565_1174" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene complement(1289645..1289908) /locus_tag="B565_1175" /db_xref="GeneID:10487092" CDS complement(1289645..1289908) /locus_tag="B565_1175" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391827.1" /db_xref="GI:330828875" /db_xref="GeneID:10487092" /translation="MSNPHDQNPPSEIHRCDQCGERTRHIVVLVPRDHSQDVMPKDPR KAFWQAFRSSSLTNAVFGQTLAYQATHVKHLVCERCGEKFLEY" gene complement(1290075..1290986) /locus_tag="B565_1176" /db_xref="GeneID:10487093" CDS complement(1290075..1290986) /locus_tag="B565_1176" /codon_start=1 /transl_table=11 /product="NAD-dependent DNA ligase" /protein_id="YP_004391828.1" /db_xref="GI:330828876" /db_xref="GeneID:10487093" /translation="MGELNRHGQPVANYNAARNRDKQLNNLMGILDGIIADSLIDEQE ILYLDTWLKESASLNGWIFRELREMVANVLQDGKLCEEEKVHLMSALPRLMETYRHLP GVDFYSEESDKLLLEGLCQGLMGDQQLSDDEIHYLSWWMKQNSMLRAHYPGKQLYQTV ERILLDGIITAEEREELQQQLMLFIGNPFEQGAVTGMATKLAISNSEIDTLYDCTVCF TGMFLSGTRRQCEETALLLGATPQDSVTQKLDYLIIGELSSRDWRFSSYGRKIEKAML LQEKGHSVRIVTEEAWLAHANTLHESA" misc_feature complement(1290108..1290350) /locus_tag="B565_1176" /note="Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/...; Region: BRCT; cd00027" /db_xref="CDD:28909" misc_feature complement(order(1290267..1290269,1290273..1290275, 1290282..1290284,1290291..1290293,1290303..1290305)) /locus_tag="B565_1176" /note="Dimer interface [polypeptide binding]; other site" /db_xref="CDD:28909" misc_feature complement(1290111..1290113) /locus_tag="B565_1176" /note="BRCT sequence motif; other site" /db_xref="CDD:28909" gene complement(1291227..1292264) /locus_tag="B565_1177" /db_xref="GeneID:10487094" CDS complement(1291227..1292264) /locus_tag="B565_1177" /codon_start=1 /transl_table=11 /product="maltose regulon regulatory protein MalI" /protein_id="YP_004391829.1" /db_xref="GI:330828877" /db_xref="GeneID:10487094" /translation="MSPKSLSAKATKITDVAQRAGVSVTTVSMVLNGKGRISPATAER VQQAIKELDYVPNSAAANLRSQQSNLVGLILRDITDPFYTEVTAGVSEVLEQQGYLLF LTQCGHSPERLQQSIHSLSRQGVAGIIFNPVRGAAAKTLETLIDSELPVVCAARSYYR DDVDFIGPDNTHAAKQATTYLIEQGHRHIAYVGGRADSLTRAERIGGYCASLLQYGLP FKPEWVLECERTQRSAADTIAQLLHQHPKVTAVLCHYPEVALGAIYGVEASGRTVGKD NYIGQQVALLGFDDVAEAELTSPALTFVSSPAREIGRQAAKRLLTRMQQPELAPNRHI ITPNLQKRESA" misc_feature complement(1291239..1292249) /locus_tag="B565_1177" /note="DNA-binding transcriptional repressor MalI; Provisional; Region: PRK10014" /db_xref="CDD:182193" misc_feature complement(1292070..1292222) /locus_tag="B565_1177" /note="Helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators; Region: HTH_LacI; cd01392" /db_xref="CDD:143331" misc_feature complement(order(1292073..1292078,1292082..1292087, 1292094..1292096,1292103..1292105,1292142..1292144, 1292151..1292156,1292169..1292171,1292178..1292183, 1292187..1292201)) /locus_tag="B565_1177" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature complement(1292076..1292105) /locus_tag="B565_1177" /note="domain linker motif; other site" /db_xref="CDD:143331" misc_feature complement(1291236..1292057) /locus_tag="B565_1177" /note="Ligand-binding domain of MalI, a transcription regulator of the maltose system of Escherichia coli and its close homologs from other bacteria; Region: PBP1_MalI_like; cd06289" /db_xref="CDD:107284" misc_feature complement(order(1291461..1291466,1291473..1291475, 1291485..1291487,1291569..1291571,1291893..1291901, 1291908..1291910,1291917..1291919,1291950..1291952, 1291956..1291970,1291989..1291994,1291998..1292003, 1292010..1292018,1292055..1292057)) /locus_tag="B565_1177" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:107284" misc_feature complement(order(1291347..1291349,1291398..1291400, 1291578..1291580,1291653..1291655,1291761..1291763, 1291800..1291802,1291872..1291874,1292007..1292009, 1292016..1292021)) /locus_tag="B565_1177" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:107284" gene 1292546..1294117 /locus_tag="B565_1178" /db_xref="GeneID:10487095" CDS 1292546..1294117 /locus_tag="B565_1178" /codon_start=1 /transl_table=11 /product="maltose-and glucose-specific phosphotransferase enzyme IIB component" /protein_id="YP_004391830.1" /db_xref="GI:330828878" /db_xref="GeneID:10487095" /translation="MAKPQAKSTIWEFLQSLGKTFMLPVALLAFSGILLGVGSSLTSD AVKQSMPFLDNTVLQLLFLWMTKVGLVAFIYLPVMFAVAIPLGLAREEKGVAAFAGFV GYAALNLSINFYLTVANVIGDAAAEKAYGVKSILGISSIDTGILGAIIVGVIVAKLHA RFYTYKMPDALAFFGGARFVPIITALVLGVVGLVVPFVWPWFAAGINGIGALISHAGP FGPFLFGTGERLLLPLGLHHILVALIRFTEAGGTQLVCGHEVSGALNIFYAELSCADT SGFSVSATSFLSQGKMPAFLGGLPGAALAMYHCARPENRGKIKALLVSGVVACVIGGI TEPLEFLFLFVAPVLYVIHAILTGLGFMTMGLLGVTIGNTDGNLIDFLVFGVLQGTAT KWYLVPVAAAIWFAIYYSVFRFAIVRFNLKTPGREIETSETAQPAGKKAGNSGYNGEI ILNALGGADNILALDNCITRLRMSVQDMSRVDDKVLKANGAIGVIKLDEHNLQVVIGP QVHLVKNQLQSLMGA" misc_feature 1292546..1294114 /locus_tag="B565_1178" /note="bifunctional PTS system maltose and glucose-specific transporter subunits IICB; Provisional; Region: PRK10110" /db_xref="CDD:182245" misc_feature 1292759..1293610 /locus_tag="B565_1178" /note="Phosphotransferase system, EIIC; Region: PTS_EIIC; cl00557" /db_xref="CDD:186079" misc_feature 1293896..1294108 /locus_tag="B565_1178" /note="PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIB_glc; cd00212" /db_xref="CDD:29267" misc_feature 1293941..1293961 /locus_tag="B565_1178" /note="active site turn [active]" /db_xref="CDD:29267" misc_feature 1293944..1293946 /locus_tag="B565_1178" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29267" gene 1294205..1295395 /locus_tag="B565_1179" /db_xref="GeneID:10487096" CDS 1294205..1295395 /locus_tag="B565_1179" /codon_start=1 /transl_table=11 /product="cystathionine beta-lyase/maltose regulon modulator" /protein_id="YP_004391831.1" /db_xref="GI:330828879" /db_xref="GeneID:10487096" /translation="MHDIYDFDHVVDRHGTYCTQWDYVADRFGHADLLPFTISDMDFE TAPCIRQTLAARLEHGVFGYSRWNHDDFKGAVSNWFAHRYGASLDPETLVYGPSVIYV IAQLVSLWSAPGEGVLVHTPAYDAFGNMLTANDRVLLPCPLKKEQGSYQIDWQCFEQQ AARPDCRIMLLCSPHNPTGRVWTRDELGRMAAICQRHRVKVISDDIHMDVSFARYLPW SEVAPDESWALVSSGSKSFNIPALGGAYAFIANAAARAAYLQRLKAAHGLSSPPILGV LAHISAYRDGAAWLDALKAYLHGNLTHVAARLNAAFPAIDYRVPEGTYLAWIDLRGLG IDSTERMDALQTLLVEKYRVAIMRGDTYGPEGTGYIRLNVGCPRSKVDQGLDALIGAL GEVV" misc_feature 1294298..1295389 /locus_tag="B565_1179" /note="aspartate aminotransferase; Provisional; Region: PRK08361" /db_xref="CDD:169403" misc_feature 1294304..1295368 /locus_tag="B565_1179" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature order(1294496..1294504,1294574..1294576,1294730..1294732, 1294823..1294825,1294898..1294900,1294904..1294909, 1294931..1294933) /locus_tag="B565_1179" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature order(1294505..1294507,1294604..1294606,1294802..1294804, 1294925..1294933,1295027..1295029,1295036..1295038) /locus_tag="B565_1179" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature 1294907..1294909 /locus_tag="B565_1179" /note="catalytic residue [active]" /db_xref="CDD:99734" gene complement(1295538..1296047) /locus_tag="B565_1180" /db_xref="GeneID:10487097" CDS complement(1295538..1296047) /locus_tag="B565_1180" /codon_start=1 /transl_table=11 /product="Crossover junction endodeoxyribonuclease ruvC" /protein_id="YP_004391832.1" /db_xref="GI:330828880" /db_xref="GeneID:10487097" /translation="MGIDPGSRITGYGVIRVVGGKAEYLGSGCIRTDCGELPERLKQV YDGVCEIITQFKPTEFAIERVFMARNADSALKLGQARGSAIVAAVNAYLPVSEYSATQ IKQAVVGTGGAAKEQVQHMVTHLLKLSATPQADAADALGVALCHLHTRQSLIKMAGRA SSSVRGRYR" misc_feature complement(1295601..1296047) /locus_tag="B565_1180" /note="Holliday junction resolvases (HJRs) are endonucleases that specifically resolve Holliday junction DNA intermediates during homologous recombination. HJR's occur in archaea, bacteria, and in the mitochondria of certain fungi, however this CD includes...; Region: RuvC_resolvase; cd00529" /db_xref="CDD:29627" misc_feature complement(order(1295634..1295636,1295643..1295645, 1295859..1295861,1296036..1296038)) /locus_tag="B565_1180" /note="active site" /db_xref="CDD:29627" misc_feature complement(order(1295703..1295705,1295736..1295738, 1295745..1295747,1295820..1295822,1295841..1295843, 1295955..1295957,1296024..1296026)) /locus_tag="B565_1180" /note="putative DNA-binding cleft [nucleotide binding]; other site" /db_xref="CDD:29627" misc_feature complement(order(1295778..1295783,1295793..1295795, 1295802..1295807,1295811..1295816,1295823..1295828, 1295835..1295837,1295850..1295852,1295913..1295915, 1295922..1295924)) /locus_tag="B565_1180" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29627" gene complement(1296175..1297224) /locus_tag="B565_1181" /db_xref="GeneID:10487098" CDS complement(1296175..1297224) /locus_tag="B565_1181" /codon_start=1 /transl_table=11 /product="RND family efflux transporter MFP subunit, AcrA/E family" /protein_id="YP_004391833.1" /db_xref="GI:330828881" /db_xref="GeneID:10487098" /translation="MTHMITRMLAGAVLIAGSALPVLAAQGKMVTLADVTQGDAAANI WVSGTVASRQQAALSAEVSGRVEWIAEFGSRVKKGDELLRLDSAALRLSLEQARAEQA KWQSNLRFARAESQRITRLHQQKSASQSQYDKASYDVEQAALAERLAAIQVNQIEEQL RRSHIYAPFDGVVNNHFIQPGEHVDAGEQALELVNPDQPDIRLQAPILWAQQLAPQTR LRVEGEQLSGHGVYYQRAASADPKSRLIELRLKPEAGNFIIGSPVRVALPLGDQQSML LPRDALVLGTDGSVVYQVARSGKSLKVNRVPVTVLFGDSQQVAVSGALKQGDRVVVRG AGSLQDGDTIALFKG" misc_feature complement(1296184..1297137) /locus_tag="B565_1181" /note="RND family efflux transporter, MFP subunit; Region: RND_mfp; TIGR01730" /db_xref="CDD:162505" gene complement(1297240..1300302) /locus_tag="B565_1182" /db_xref="GeneID:10487099" CDS complement(1297240..1300302) /locus_tag="B565_1182" /codon_start=1 /transl_table=11 /product="AcrB/AcrD/AcrF family protein" /protein_id="YP_004391834.1" /db_xref="GI:330828882" /db_xref="GeneID:10487099" /translation="MNLAKTAIERPIWVAVSIVLIFLLGLLSIRGLPIQLFPDIDRPH LNISVSWRSASPQEMESEITDPIEQEMQGVQGLKSLVSNSYPGFTEIDMEFALGTDMQ RAQLDVISRLNRVSGLPDKIGGPYVNNYSSNDTLTFFFIQQLPGAQGVIDDHQALIEA RVKPELERIEGVSTVAVEGINERQIQIRFDPYRAAELGVEIPVLASRATTGWDVSAGT LDIGRWEYKLRFAGRYDVETLGDKVVDWRDGLPIYLRDVAEVRVAREENPVLRIQNGN TAIAAQIFKESGANALASLEAIKARVNELNREVLEPVGLHMEQSFDASLYINRAVSMV TANLGLGVLLSCAILWLFLRQLKATLMIALAIPISIMLTFCLLKVMDRTLNIISLAGI AFAVGMVLDAAIVVLESIYRRHERGDLSKTEAALEGTRQVWTALVASTLTTVAIFLPV LLLNDVEGQLFADLALTIACAVTVSMLVAVIVLPAVAARWMGHETLTDPYESLWQRTT RHVIRWTSTSRQRWTVITLMMSLPALATWALLPKMDYLPDVKRDAVDVWMNFTPGVNL KAQREEVIDTLIARLAPYMKGEKEPALKNYYILRYPGGAQIGVRPKDENRIKELESLL MKQLLVGIPDTRVFGGQGSLFGGFDSENGVSLLLQGGNLPELYQAARASMGILSKDLP GAQIRPEPSLDFTAPELKLVPQDRRLAEVGWDRTPLPTIIQTFGDGLRVGEYFDGEDR LDIMLMGQSSANPDELKAVPLATPSGRIVPLGELLRVEHDMGPASIFRADGRRSIILQ IAPPAGMTMEQVIDTLKNRSFAAIRPLLPAGGELRIAGNADSLQQALDNLGTIFLFAV VILLVLLWGVFASIKDALLVLLTLPLASVGGVLALQLSGLLVPLPMDLLTIIGFVILL GLVVNNAILLVHQTRTAERDGMSRQLAVADALQSRMRPIAMTSLTSIFGMLPLMLSPS EGSEIYRGLATVIVGGMSCSTLFTLILLPAFLRLGEQVAIPQPLRQRA" misc_feature complement(1297279..1300299) /locus_tag="B565_1182" /note="Cation/multidrug efflux pump [Defense mechanisms]; Region: AcrB; COG0841" /db_xref="CDD:31183" gene complement(1300470..1302809) /locus_tag="B565_1183" /db_xref="GeneID:10487100" CDS complement(1300470..1302809) /locus_tag="B565_1183" /codon_start=1 /transl_table=11 /product="putative acyl-CoA dehydrogenase family oxidoreductase" /protein_id="YP_004391835.1" /db_xref="GI:330828883" /db_xref="GeneID:10487100" /translation="MITLLVLLVLAIAVVLGVPSIRKKVVTRPVFGIFKKILPPLSAT EREAMEAGSVWWDGELFRGNPDWKKLHGYGKAELTAEEQAFIDNQVETLLAMVDDFKI VNETKDLPEPVWDYLKKEGFFSLIIPKSYGGREFSAIANSTIVTRIATKSLSVAVTVM VPNSLGPGELLMHYGTQAQKDFWLPGLANGKEVPCFALTGPEAGSDAGAIPDKGIVCK GMHKGEEVLGIRLNWNKRYITLAPRATVLGLAFKLYDPEKLLGDKEELGITCALIPTS HPGVRVGDRHYPMGLAFLNGPTFGKDVFIPLDWIIGGPDYAGRGWRMLVECLSAGRGI SLPALGTACGHMASRTVGAYSYVRKQFGMSIGKFEGVQEALARIGGLTYQLEGARRMT AGSLDLGQAPAIVTAISKYHMTEMARQIMDDSMDIHAGRAIQLGPKNYTGYAYMGIPV AITVEGANILTRNLMIFGQGATRCHPYVFAELEAAADTDVERGLEKFDALLMKHIAFG AGNFFGSLFQGLTLGQFNSAPVAGETARYYKQLSRMSKGLALCADVSMLMLGGDLKRK EMISARLGDVLSHLYLASATLKHYEDQGRMVSDLPFVQYAVERNLYLIGKAFEGFFQN FPNKVVGAVLKRVVFPFGVGYKMPADDRCHAICLAMMKPGEFRDRLTALCYVGKDEAD PVGLMERAFQAMVAVQPYEKKLVQAQKEGKLPRKLALPELVAAALAGSILSKDEADKL LAADALRYEAIQVDNFAPGELEGFSQQANKQPNKVEHAA" misc_feature complement(1300500..1302755) /locus_tag="B565_1183" /note="acyl-CoA dehydrogenase; Reviewed; Region: PRK13026" /db_xref="CDD:183849" misc_feature complement(1301520..1302563) /locus_tag="B565_1183" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:195931" misc_feature complement(order(1302093..1302095,1302099..1302101, 1302216..1302218,1302222..1302224,1302315..1302317)) /locus_tag="B565_1183" /note="active site" /db_xref="CDD:173838" misc_feature complement(1300542..1301396) /locus_tag="B565_1183" /note="Domain of unknown function (DUF1974); Region: DUF1974; pfam09317" /db_xref="CDD:150096" gene complement(1302858..1303511) /locus_tag="B565_1184" /db_xref="GeneID:10487101" CDS complement(1302858..1303511) /locus_tag="B565_1184" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_004391836.1" /db_xref="GI:330828884" /db_xref="GeneID:10487101" /translation="MSKIDTKNRILDAAEVLFAERGFADTSLRLITSEADVNLASVNY HFGSKKELIQAVLDRYLSLFMPDLDARLRVLMEQEQLTLLQLFESFVEPLMKLSAVRA NGPAIFMQLLGRGYIDSQGHLRRFITAHYGPILQRITQAISKANPALSPADLFWRLHF TLGTVVFTMASADALRDIALADFGQQLDVEGLVRNVIPYLASGVGAPVESTRLSLAV" misc_feature complement(1303344..1303484) /locus_tag="B565_1184" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene 1303974..1304714 /locus_tag="B565_1185" /db_xref="GeneID:10487102" CDS 1303974..1304714 /locus_tag="B565_1185" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="YP_004391837.1" /db_xref="GI:330828885" /db_xref="GeneID:10487102" /translation="MKYPVDTHTHTIASTHAYSTIHDYLPIARAKGIKLFATTDHGPE MADAPHVWHFANLPILPRVVDGVGILRGIEANIKNLDGEIDFPERYESRLDMIMAGFH EQVFPPCDQATHTQAMINAIKSGRVDMISHPGNPSFPIDIQAVVKAAADYRVALEINN SSFIHSRPGSEGNCRAIVEAARDLGAYLTFGSDSHVAFTLGDFDHCHRLVTEAGFPQE RILVRSPRALLEFLESRGRAHIPEFADL" misc_feature 1303974..1304711 /locus_tag="B565_1185" /note="putative hydrolase; Validated; Region: PRK09248" /db_xref="CDD:181726" misc_feature 1303989..1304210 /locus_tag="B565_1185" /note="DNA polymerase alpha chain like domain; Region: POLIIIAc; smart00481" /db_xref="CDD:128757" misc_feature <1304334..>1304552 /locus_tag="B565_1185" /note="RNase P subunit p30; Region: RNase_P_p30; cl03389" /db_xref="CDD:194612" gene 1304804..1304879 /locus_tag="B565_t039" /db_xref="GeneID:10487103" tRNA 1304804..1304879 /locus_tag="B565_t039" /product="tRNA-Thr" /db_xref="GeneID:10487103" gene complement(1305037..1309227) /locus_tag="B565_1186" /db_xref="GeneID:10490024" CDS complement(1305037..1309227) /locus_tag="B565_1186" /codon_start=1 /transl_table=11 /product="NAD-dependent formate dehydrogenase subunit alpha" /protein_id="YP_004391838.1" /db_xref="GI:330828886" /db_xref="GeneID:10490024" /translation="MITITLDGAQLTVDPTRTLLQIAKQHQTDIPSLCGDNTSGPQTP CDLCVVEIAGLGIRRACETRPEAGMVITTKSEDLSTHRQQALGRILADHYADCEAPCQ RACPAGVDIQSYLHHIAMGDHEAAMAVIKQTLPMPLSIGRVCPAFCEAECRRALVDEP LAIRQLKRHAADRDLAEIAPYQPAKKPAKGKRVAIIGSGPGGLTCGYYLGYEGFEVDL FEAMPEAGGWLRYGIPEYRLPKAILDQEIALMCQSGMRIHTKQRLGHQLTLSALCRDY DAVCLAVGASKAVPMDYPGSTLAGCYLGVDYLKDRMLAKRLTTGKRVAVIGGGNTAID CARTAVRLGAETTLIYRRTRAEMPAEAYEIDEAEHEGVRFLMLTNPVENLPDSCGRVC QVRLERMALGEPDASGRRRPEPTGELFLEEFDTVIAAVSQQPDLSFMEGEPLTLPFTR WQTLESHPETMHSGHGNLFAIGDLRRGPATAIEAVADGRKAALAIDQFLHGDMVDPVR PFNACKAPTLKQVDPAQFAHLKKVARTIMPHLAEKDREGSFAEVERGLSDADARSEAS RCLECGCQANTDCALRDYATEYKVEQSALDTSQCQKFAVDNSSEFIVFDANRCIGCGQ CVQTCGEQAVQGVLRFAKNSDGTLSNRPQFDTGLSMGDSHCVQCGACVQVCPTGALVD ARDKSQGRTELLTPVNTICTYCGVGCGVTLYVDEERNRIRYVEGNRNSPVNQGLLCVK GRFGFDFIQSEERLTTPLVRKNGELVPASWQEAIALVAERFTALRQHYGSDALAGFSS AKTTNEENYLFQKFMRRELGTNNVDHCARLCHASTVTGLEASLGSGAMTNDIPSIDHS DLIFIIGSDTSAAHPIIGSHIKRAVTMGKARLVVADPKRIEMADHASLYLAHRPGTDV MLLNGLMQQIIQNNWHDKAYIADRVEGFEALQAEVLSPAYAPDKVALVTGVPAEQVIE LARLIGTAEHTAVYYSMGITQHTTGHDNVRAIANLQLLCGNIGIEGGGINPLRGQSNV QGACDMGALPNCLPGYQKVANPEVHARFVAAWQQPDLPRTPGLTLTETIDAACAGSIK GLYVMGENPVLSDPDQHHVIEGLKQLEFLVVQDIFLSETAQLADVVLPSSSFAEKSGH FTNTERRVQRISPALNAPGDAREDWWIIQQIANAMGGDWRYQHPKEITAEICQVTPQY AGIQWDKVGAQGLQWPSNDAAPEGTRLLHSKQFTRGKGEMVATPFRYAAELPDETYPI VLTTGRLLEQFHTGTMTRKTKGLDKLAGPRVMMSVVDAERLGISNSERVKVTSRRGHI ELPTFVTKRMQPGVVFIPFHFAEAPANRLTINATDPHAKIPEFKVAAVRIDKLESPSQ TGVLSMQKEPAKPDIEVP" misc_feature complement(1307188..1309224) /locus_tag="B565_1186" /note="putative NADPH-dependent glutamate synthase small subunit; Provisional; Region: PRK12814" /db_xref="CDD:139246" misc_feature complement(<1308547..1308654) /locus_tag="B565_1186" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(<1308082..1308264) /locus_tag="B565_1186" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(<1307194..>1307382) /locus_tag="B565_1186" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" misc_feature complement(1305118..1307133) /locus_tag="B565_1186" /note="formate dehydrogenase, alpha subunit, archaeal-type; Region: Fdh-alpha; TIGR01591" /db_xref="CDD:130652" misc_feature complement(1305475..1307133) /locus_tag="B565_1186" /note="Formate dehydrogenase H (Formate-Dh-H) catalyzes the reversible oxidation of formate to CO2 with the release of a proton and two electrons. It is a component of the anaerobic formate hydrogen lyase complex. The E. coli formate dehydrogenase H (Fdh-H)...; Region: MopB_Formate-Dh-H; cd02753" /db_xref="CDD:73321" misc_feature complement(order(1307014..1307016,1307104..1307106, 1307110..1307112,1307116..1307121,1307125..1307127)) /locus_tag="B565_1186" /note="[4Fe-4S] binding site [ion binding]; other site" /db_xref="CDD:73321" misc_feature complement(order(1305718..1305720,1305814..1305819, 1305853..1305855,1305859..1305870,1305928..1305930, 1305940..1305942,1305946..1305948,1306147..1306152, 1306246..1306251,1306258..1306266,1306489..1306491, 1306495..1306497,1306546..1306548,1306552..1306557, 1306621..1306626,1306633..1306644,1306741..1306746, 1306828..1306830,1307008..1307010)) /locus_tag="B565_1186" /note="molybdopterin cofactor binding site; other site" /db_xref="CDD:73321" misc_feature complement(1305112..1305456) /locus_tag="B565_1186" /note="Formate dehydrogenase H (Formate-Dh-H) catalyzes the reversible oxidation of formate to CO2 with the release of a proton and two electrons. It is a component of the anaerobic formate hydrogen lyase complex. The E. coli formate dehydrogenase H (Fdh-H)...; Region: MopB_CT_Formate-Dh_H; cd02790" /db_xref="CDD:30322" misc_feature complement(order(1305136..1305141,1305187..1305189, 1305211..1305213,1305403..1305414,1305418..1305432)) /locus_tag="B565_1186" /note="molybdopterin cofactor binding site; other site" /db_xref="CDD:30322" gene 1309306..1309533 /locus_tag="B565_1187" /db_xref="GeneID:10487104" CDS 1309306..1309533 /locus_tag="B565_1187" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391839.1" /db_xref="GI:330828887" /db_xref="GeneID:10487104" /translation="MLYAHHNKDYLQLYLILDSLLFKRENDFRLPCLPHRLGASLRII PVKARDSLSYCQFMRLVEERLLSLAVGVIRQ" gene complement(1309759..1310940) /locus_tag="B565_1188" /db_xref="GeneID:10487105" CDS complement(1309759..1310940) /locus_tag="B565_1188" /codon_start=1 /transl_table=11 /product="response regulator" /protein_id="YP_004391840.1" /db_xref="GI:330828888" /db_xref="GeneID:10487105" /translation="MVVEDHGFQRKTLMHQIRALGYQQLLEAADGIEALALCQSHTVD ILFCDLRMPGMDGMALLRRLSLGGFRGGIILSSALEDDVVEAVLRMSAAYGLHVLGRI EKPSSPQRLRQLIDSWAPKSAPSGKDDGLVLSVDELKRALDNDQLLPWYQPKVGFASG QWVGMEALARWQHPEYGLISPGMFIPLAENNGLIDQLTDVIINKSLQDCHLWGQTGLS LNLSMNLSTTSLIEGDLCHFLINQCQRWGVNPELITLEVTESSFVEDIGKALEVLTRL RMHGFGLSIDDFGTGYSSMQQLALLPFTELKLDRSFVDRCYADPSRLAIIESSIELAR KLGLKSVAEGVEDVQTWQLLAKLGCDICQGFFTARPMPRSELQHWHQIWQARLPTLIS G" misc_feature complement(1310584..1310940) /locus_tag="B565_1188" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(1310593..1310940) /locus_tag="B565_1188" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature complement(order(1310626..1310631,1310638..1310640, 1310710..1310712,1310770..1310772,1310794..1310796, 1310926..1310931)) /locus_tag="B565_1188" /note="active site" /db_xref="CDD:29071" misc_feature complement(1310794..1310796) /locus_tag="B565_1188" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(1310770..1310778,1310782..1310787)) /locus_tag="B565_1188" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(1310623..1310631) /locus_tag="B565_1188" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(1309816..1310532) /locus_tag="B565_1188" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:30163" gene complement(1310963..1315207) /locus_tag="B565_1189" /db_xref="GeneID:10487106" CDS complement(1310963..1315207) /locus_tag="B565_1189" /codon_start=1 /transl_table=11 /product="Virulence sensor protein BvgS" /protein_id="YP_004391841.1" /db_xref="GI:330828889" /db_xref="GeneID:10487106" /translation="MPSQCNRLFLFLLLLLWGVAAHAITSLNEDEFDLSERAWLSSHQ ELVIGMPMMGDPPYSYKDADQRFTGPVPDIAQQIARTLGLTLRFKVYPSYVDALTGLD HGAIDMLVNDQPSEQWRSNIVSLPFLLSMPRGVLLNNGKTKLSRQDAHGLHWVCVTGV NACSELKKLGFLRVTEAESRSEAAFMLKKRMADAYLADMPSLVMVRDQHPKAGFTIAT PEWVSGTSLSINMHKSDPALVSLVSKAFNEIPVEDRRHMLAATTTSQHADSGAVKSVQ FTPEEQEWLNQHPELTYGVSPDWTSMSEFNYRGRLVGYVADLMALMQQVSGLKFSLVR TNSWGETQNMLKLRQIDFIPAISPNHDRGQFALFTPGYLFVDRVVIAPKGSTDITDLS LLRGKRVGMVHGSLDKDLLTHIGAHPVEVNNDNRLLELLDTGDADYVMVTLPSINKRV SERYQVVYAGKDLRLPVAMATRKDPMLQRILTKVLYSIPPEELNKVERRWLSMSVQTG INSETVLFWFAMGGAAATLLFALFWAWNRTLKREIVQRQRAEKTLNEQLVFIQTLLDS LPNMVALRDRDHRLTLSNRAYRELFVGDGEEGDHWGYMTEDERQQMLREERAVWETGD IFEGSGYTQREGDVPLHVVYVKLPYRAADGAIQGVLTVLTDVSALKAAENKVREVEGR LRDITDSMPGLVYQYLWQGAGKGQFLYLSQGASDILGMTHQELMAAESGGVILGLNDE ALATFIDKVAKHAQTLEPLDMEVLVPSVQGERYIQIRGNFVAQQGHDRLLNGVVQDIT AIKQQEHELREARAAAEQAMQARSLFLATMSHELRTPISGMHGMLELLRMSELNDDQR YLLRNVESSANHLLYLVNDILDFSKIEAGQLHLNRQSCRLQPVVCDVIRGHAALAYSK GLKVTLQWEDQLPDLADIDPVRVGQVVSNLLNNAVKFTEQGAISIQVSCHDQQLVIAV TDTGIGIAEEKQAKLFTPFEQVESDINRRFGGTGLGLAICDQLVKKMGGTLTVKSQLG EGACFRFSIPLLNVLWEPPALAGSEWWWLGSDAALQATMARLGAQLTPLDIHQLTADL DGLLLAEEAALESSLGSDWHTLLQSGTLKGVILSPREALRGRMGSENWWRLGQSPLYP DLLLESCRELITGRAVTTHAASIEKLGGRVLVADDHLVNRALLTRQLAILGVECEVVE DGEKALRAWQTRNFALLITDCHMPHMDGYTLTRRLREQGEQAPIIGVTADTSEEAAAN MAAAGMNDMLCKPYSLESLRQMLLRWLPATTITERVPARQAINLDMLGRWQDLFGDEE IAKSMAREYLASNRKDCHAMMSALSSDDSQELVEIAHRIKGAARMVGELSLAEQAAQL ESAARLKQLSELALLTQRVEEQMNNIEREMGLWLDE" misc_feature complement(1314461..1315072) /locus_tag="B565_1189" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature complement(1314461..1315042) /locus_tag="B565_1189" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature complement(order(1314614..1314616,1314725..1314727, 1314851..1314853,1314929..1314931)) /locus_tag="B565_1189" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature complement(order(1314635..1314637,1314653..1314655, 1314665..1314667)) /locus_tag="B565_1189" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature complement(1314524..1314541) /locus_tag="B565_1189" /note="hinge residues; other site" /db_xref="CDD:29040" misc_feature complement(1313705..1314340) /locus_tag="B565_1189" /note="Bacterial periplasmic substrate-binding proteins; Region: PBPb; smart00062" /db_xref="CDD:128376" misc_feature complement(1313705..1314337) /locus_tag="B565_1189" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature complement(order(1313882..1313884,1313990..1313992, 1314122..1314124,1314194..1314196,1314311..1314313)) /locus_tag="B565_1189" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature complement(order(1313903..1313905,1313921..1313923)) /locus_tag="B565_1189" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature complement(1313804..1313818) /locus_tag="B565_1189" /note="hinge residues; other site" /db_xref="CDD:29040" misc_feature complement(<1313123..>1313584) /locus_tag="B565_1189" /note="hypothetical protein; Provisional; Region: PRK13560" /db_xref="CDD:106506" misc_feature complement(1312088..>1313083) /locus_tag="B565_1189" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: VicK; COG5002" /db_xref="CDD:34607" misc_feature complement(1312565..1312738) /locus_tag="B565_1189" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature complement(order(1312580..1312582,1312592..1312594, 1312601..1312603,1312613..1312615,1312622..1312624, 1312634..1312636,1312682..1312684,1312691..1312693, 1312703..1312705,1312712..1312714,1312724..1312726, 1312736..1312738)) /locus_tag="B565_1189" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature complement(1312718..1312720) /locus_tag="B565_1189" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature complement(1312091..1312393) /locus_tag="B565_1189" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(1312103..1312105,1312109..1312114, 1312127..1312129,1312133..1312135,1312181..1312192, 1312271..1312276,1312280..1312282,1312286..1312288, 1312292..1312294,1312358..1312360,1312367..1312369, 1312379..1312381)) /locus_tag="B565_1189" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(1312367..1312369) /locus_tag="B565_1189" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(1312184..1312186,1312190..1312192, 1312274..1312276,1312280..1312282)) /locus_tag="B565_1189" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature complement(1311350..1311682) /locus_tag="B565_1189" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature complement(1311341..1311679) /locus_tag="B565_1189" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(1311383..1311388,1311395..1311397, 1311452..1311454,1311512..1311514,1311536..1311538, 1311665..1311670)) /locus_tag="B565_1189" /note="active site" /db_xref="CDD:29071" misc_feature complement(1311536..1311538) /locus_tag="B565_1189" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(1311512..1311520,1311524..1311529)) /locus_tag="B565_1189" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(1311380..1311388) /locus_tag="B565_1189" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(<1311107..1311259) /locus_tag="B565_1189" /note="Histidine Phosphotransfer domain, involved in signalling through a two part component systems in which an autophosphorylating histidine protein kinase serves as a phosphoryl donor to a response regulator protein; the response regulator protein is...; Region: HPT; cl00086" /db_xref="CDD:193652" gene complement(1316028..1316516) /locus_tag="B565_1190" /db_xref="GeneID:10487107" CDS complement(1316028..1316516) /locus_tag="B565_1190" /codon_start=1 /transl_table=11 /product="SsrA-binding protein" /protein_id="YP_004391842.1" /db_xref="GI:330828890" /db_xref="GeneID:10487107" /translation="MSKKNSKNKAGSSTIALNRTARHEYFIEEKIEAGLSLQGWEVKS LRAGKANISEAYVIFRDGEAYLFGSSFLPLQAASSHVVCDPTRTRKLLLSRRELDKLE SLIARQGYTIVPLALYWKQCWVKVEIGLVKGKKEHDKREDTKAREWDREKARIMKNKH RG" misc_feature complement(1316115..1316465) /locus_tag="B565_1190" /note="Small protein B (SmpB) is a component of the trans-translation system in prokaryotes for releasing stalled ribosome from damaged messenger RNAs; Region: SmpB; cd09294" /db_xref="CDD:187755" misc_feature complement(order(1316142..1316144,1316226..1316243, 1316328..1316330,1316379..1316381,1316388..1316393, 1316397..1316402,1316406..1316423)) /locus_tag="B565_1190" /note="SmpB-tmRNA interface; other site" /db_xref="CDD:187755" gene 1316686..1317120 /locus_tag="B565_1191" /db_xref="GeneID:10487108" CDS 1316686..1317120 /locus_tag="B565_1191" /codon_start=1 /transl_table=11 /product="polyketide cyclase/dehydrase family protein" /protein_id="YP_004391843.1" /db_xref="GI:330828891" /db_xref="GeneID:10487108" /translation="MPRITRSALVMFSAEQMFKLVNDVDAYPQFLPGCVGSRVHEAGD DYMMASVDVAKAGIAKTFTTRNQLDVNRQIRMELVDGPFRKLAGWWTFTPLDVDACKV EFDLDFEFTSKLIEVAFGQVFRDLVSSMVSAFSNRAKEVYGV" misc_feature 1316695..1317108 /locus_tag="B565_1191" /note="Coenzyme Q-binding protein COQ10p and similar proteins; Region: COQ10p_like; cd07813" /db_xref="CDD:176855" misc_feature order(1316695..1316697,1316701..1316703,1316707..1316709, 1316734..1316742,1316746..1316751,1316794..1316796, 1316824..1316826,1316830..1316832,1316836..1316838, 1316842..1316844,1316875..1316877,1316881..1316883, 1316887..1316889,1316905..1316907,1316911..1316913, 1316944..1316949,1316953..1316955,1316959..1316961, 1316989..1316991,1316995..1316997,1317001..1317003, 1317007..1317009,1317040..1317054,1317058..1317066, 1317070..1317078,1317085..1317087) /locus_tag="B565_1191" /note="putative coenzyme Q binding site [chemical binding]; other site" /db_xref="CDD:176855" gene 1317113..1317460 /locus_tag="B565_1192" /db_xref="GeneID:10487109" CDS 1317113..1317460 /locus_tag="B565_1192" /codon_start=1 /transl_table=11 /product="protein YfjF" /protein_id="YP_004391844.1" /db_xref="GI:330828892" /db_xref="GeneID:10487109" /translation="MSDQLNIEVVYALPQQQTVIALRVAPETCVLAAIEQSGIVQKHP EIDLAVNKFGIYSRPVKGSEPLHDGDRIEIYRPLIADPREMRKKRAEKAKEEGRADSV TGGRPDVHRKHRE" misc_feature 1317116..1317358 /locus_tag="B565_1192" /note="Uncharacterised protein family (UPF0125); Region: UPF0125; cl01096" /db_xref="CDD:186330" gene complement(1317542..1318816) /locus_tag="B565_1193" /db_xref="GeneID:10487110" CDS complement(1317542..1318816) /locus_tag="B565_1193" /codon_start=1 /transl_table=11 /product="peptidase, M20D family" /protein_id="YP_004391845.1" /db_xref="GI:330828893" /db_xref="GeneID:10487110" /translation="MTLEHLILWRRDLHRLPEAAWKEFRTTSLIAHHLSELGYRIVLG DKLLASNLMMGRDVDVAAEKARARRQGAHPDWLERIGDVTGLMGELDTGRPGPTLAFR FDIDAVEVEESDAEQHQPQQEGFASHNKGWMHACAHDGHTAIGMGLASSLMAFKEQLC GRIKLFFQPAEEGCRGGKALAAGGALDDVDALLSLHIGIHAGSGELVINPTEFLCSTK FDVHFMGTAAHAGLEPNAGSNALAAACMATTAMLGIPRHRDGMTRINVGQLHAGSGRN VIPDHAELRGETRGADSTLNDYMFSQVQRIVEGTALAHGVTYRIIKQGEAIALDNSPA LQAELAALARKQGLATIQTRRFGASEDAGFLMERVQKQGGEAAYLILGADLAAPHHHN EFDFDERVMQSGVELLAAWARARLGVAEAALS" misc_feature complement(1317560..1318816) /locus_tag="B565_1193" /note="Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]; Region: AbgB; COG1473" /db_xref="CDD:31662" misc_feature complement(1317578..1318807) /locus_tag="B565_1193" /note="M20 Peptidases Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase from bacteria and archaea; Region: M20_Acy1_IAAspH_bact; cd05665" /db_xref="CDD:193541" misc_feature complement(order(1317647..1317649,1318229..1318231, 1318301..1318303,1318403..1318405,1318409..1318411)) /locus_tag="B565_1193" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:193541" misc_feature complement(order(1317749..1317751,1317848..1317850, 1317950..1317952,1317956..1317964,1317980..1318024, 1318028..1318030,1318061..1318063,1318070..1318072, 1318079..1318081,1318091..1318096,1318157..1318165)) /locus_tag="B565_1193" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:193541" gene complement(1318996..1321452) /locus_tag="B565_1194" /db_xref="GeneID:10487111" CDS complement(1318996..1321452) /locus_tag="B565_1194" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase family oxidoreductase" /protein_id="YP_004391846.1" /db_xref="GI:330828894" /db_xref="GeneID:10487111" /translation="MTTTLTLLGVILVIGALAYRRASLFISTLVTGAALVLGALYGHV PLLVWALFAVIAIPLNLVEFRRNQITKPLFKIYKSIMPEMSRTEKEAIEAGTTWWEAD LFAGNPDWKKLHAIPVSALSAEEQAFMDGPVEEVCRMVSDWEVTHERADLSPEVWQYL KDNKFFAMIIKKKYGGLEFSAYAQSCVLQKLCGASAVLASTVGVPNSLGPGELLQHYG TDEQKDYYLPRLAVGKEIPCFALTSPEAGSDAGSIPDFGIVCKGEWEGKEVLGMRLTW NKRYITLAPIATVLGLAFKLRDPEHLLGEEEELGITCALIPTHIKGVGIGRRHFPLNV PFQNGPTQGKDVFVPLDFIIGGPAMAGQGWRMLVECLSVGRGITLPSNSTGGVKMLAL ASGAYSRIRRQFKLPIGKMEGIEEPLARIGGNAYIMGAAANLTVTGIDLGEKPSVISA IVKYHLTDRAQKCIIDAMDIHGGKAICMGPNNYLARGYQGAPIAVTVEGANILTRSMI IYGQGAIRCHPYVLPEMLAASHPDKEQALKDFDKAVFSHVGFAISNLVRSFWLGITGA RFAAAPYKDQTKGYYQQLSRLSANLAFLSDMAMGTLGGELKRKERVSARLGDVLSQLY LASSALKRYQDEGRQQADLPLLHWALQDAMFKAQEAIDELLRNFPNRWIGLALRAVVL PLGRDLNRPCDKLDQQVARLLQTPSETRSRLAKGQYLTREEGNPFGLLEQALDDVLAA EPLFEKVCKSDGIKRPFMALDKVADMGLAAGVLTQSEAELLRRAEVSRLRTINVDDFD PIDLVANKKLFEASAYHHAA" misc_feature complement(1318999..1321326) /locus_tag="B565_1194" /note="acyl-CoA dehydrogenase; Reviewed; Region: fadE; PRK09463" /db_xref="CDD:181878" misc_feature complement(1319929..1320993) /locus_tag="B565_1194" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:195931" misc_feature complement(order(1319947..1319949,1319953..1319955, 1319959..1319967,1320607..1320609,1320613..1320615, 1320730..1320732,1320736..1320738,1320829..1320831)) /locus_tag="B565_1194" /note="active site" /db_xref="CDD:173838" misc_feature complement(1319062..1319910) /locus_tag="B565_1194" /note="Domain of unknown function (DUF1974); Region: DUF1974; pfam09317" /db_xref="CDD:150096" gene 1321707..1322285 /locus_tag="B565_1195" /db_xref="GeneID:10487112" CDS 1321707..1322285 /locus_tag="B565_1195" /codon_start=1 /transl_table=11 /product="phosphoheptose isomerase" /protein_id="YP_004391847.1" /db_xref="GI:330828895" /db_xref="GeneID:10487112" /translation="MYQELIRNELTEAASVLQAFLADEQNLKNIEAAAKLLADSFKEE GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYAGIAISDPSHLSCVSNDFGYDYVFS RYVEAVGRRGDVLLGISTSGNSGNILKAIEAARAKGMKVIALTGKDGGKMAGLADVEI RVPHFGYADRIQEVHIKVIHILIQLVEKEMVK" misc_feature 1321734..1322270 /locus_tag="B565_1195" /note="Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of...; Region: SIS_GmhA; cd05006" /db_xref="CDD:88403" misc_feature order(1321743..1321745,1321755..1321757,1321797..1321799, 1321806..1321808,1321866..1321868,1321884..1321889, 1322220..1322225,1322235..1322237,1322244..1322246, 1322256..1322258,1322268..1322270) /locus_tag="B565_1195" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:88403" misc_feature order(1321860..1321868,1322061..1322069,1322076..1322078, 1322205..1322207,1322220..1322222) /locus_tag="B565_1195" /note="active site" /db_xref="CDD:88403" gene 1322450..1323259 /locus_tag="B565_1196" /db_xref="GeneID:10487113" CDS 1322450..1323259 /locus_tag="B565_1196" /codon_start=1 /transl_table=11 /product="glutamine amidotransferase yafJ" /protein_id="YP_004391848.1" /db_xref="GI:330828896" /db_xref="GeneID:10487113" /translation="MCELLGMSANVPTDICFSFTGLMLRGGKTGPHKDGWGITFYEGK GFRTFKDPEPSAQSPIARLVQALPIKSCAVVSHIRQANRGCVSLENTHPFTRELWGRY WTFAHNGQLTGYKKLPTGRHRPVGDTDSEHAFCWLLDRLEQKYPKRPANFPAMFRYLA TLCDELRAFGVFNMLLSDGEYVMSYCSNNLHWLTRCAPFGEASLLDEEVVIDFQRETT PNDVVTLITTRPLTGNENWVKMAPGEFNLFRMGERVATNQVALEQDKKIPG" misc_feature 1322450..1323202 /locus_tag="B565_1196" /note="Glutamine amidotransferases class-II (Gn-AT)_YafJ-type. YafJ is a glutamine amidotransferase-like protein of unknown function found in prokaryotes, eukaryotes and archaea. YafJ has a conserved structural fold similar to those of other class II...; Region: YafJ; cd01908" /db_xref="CDD:48481" misc_feature order(1322453..1322455,1322684..1322686,1322771..1322779, 1322834..1322836) /locus_tag="B565_1196" /note="putative active site [active]" /db_xref="CDD:48481" misc_feature order(1322588..1322590,1322597..1322602,1322735..1322737, 1322807..1322812,1322873..1322875) /locus_tag="B565_1196" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:48481" gene 1323551..1323886 /locus_tag="B565_1197" /db_xref="GeneID:10487114" CDS 1323551..1323886 /locus_tag="B565_1197" /codon_start=1 /transl_table=11 /product="phosphorelay protein LuxU" /protein_id="YP_004391849.1" /db_xref="GI:330828897" /db_xref="GeneID:10487114" /translation="MEWVDRKVLQQLAEDIGPDMLPVVIAVFIEEVGEQLSQLRPLYE QGEWEALARVAHSMKSSCGSYGAMPSYQQVMALEMASKQADVAEAERQLQLLEASLPQ VLAFLADYQ" misc_feature 1323620..1323865 /locus_tag="B565_1197" /note="Histidine Phosphotransfer domain, involved in signalling through a two part component systems in which an autophosphorylating histidine protein kinase serves as a phosphoryl donor to a response regulator protein; the response regulator protein is...; Region: HPT; cl00086" /db_xref="CDD:193652" gene complement(1323926..1324840) /locus_tag="B565_1198" /db_xref="GeneID:10487115" CDS complement(1323926..1324840) /locus_tag="B565_1198" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391850.1" /db_xref="GI:330828898" /db_xref="GeneID:10487115" /translation="MWQKNINDFDRVVAIGGGHGMGRVLSSLSFLGQRLTGIVTTTDD GGSTGRLRKSQECIAWGDLRNCLNQLVTDPSIGSLLFEYRFAGKGELAGHNLGNLMLL ALDNLCVRPLDAIKLISDMLKIESQLLPMSEFPTDLCAHMECGTQILGEVSIDQLATP PLSLGLMPEVQATREAVLALQQADMIILGPGSFLTSIMPPLLLAEIAQAINESSAMLV FVCNLVTENGPASQLDLMSQCRWLESRVGQGRLDAILAPQGAGDAGDWQGRVIEAELG ELELPHRHDRLKLKLALDRIIQQLLNQR" misc_feature complement(1323938..1324807) /locus_tag="B565_1198" /note="Uncharacterised protein family UPF0052; Region: UPF0052; pfam01933" /db_xref="CDD:190165" misc_feature complement(1323962..1324807) /locus_tag="B565_1198" /note="family of mostly uncharacterized proteins similar to B.subtilis YvcK; Region: YvcK_like; cd07187" /db_xref="CDD:132873" misc_feature complement(order(1324163..1324168,1324253..1324255, 1324265..1324270,1324784..1324792)) /locus_tag="B565_1198" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:132873" misc_feature complement(order(1324547..1324549,1324649..1324651, 1324658..1324660,1324700..1324702,1324712..1324714)) /locus_tag="B565_1198" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:132873" misc_feature complement(order(1324478..1324483,1324490..1324492, 1324520..1324525,1324529..1324534,1324541..1324546, 1324553..1324555,1324568..1324570)) /locus_tag="B565_1198" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132873" gene 1324960..1326138 /locus_tag="B565_1199" /db_xref="GeneID:10487116" CDS 1324960..1326138 /locus_tag="B565_1199" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391851.1" /db_xref="GI:330828899" /db_xref="GeneID:10487116" /translation="MKFLTVHSLAQDSSLAAQDICAQLRHYADQAPSLLLLYFTQAHE GAILRDALKRQFPTTRLLGCSSCGGVMTEMGHHARDGYGLAVAALYDEKGAFGVAGAS GDGVDVRQLLRRAMSDCGRPGELPQLILFHASPGKEEGLLAGIEAELGASVPVVGGSA ADSSVSGDWQLCWDEAVAQDGIGLAVLYPDCQLAFQFHSGYVPAEFSGEITTCNGREV LTIDHQPAAEVYARWCGREQLWPVGAILRETTLTPLARQVGALDGIPYYKLSHPEAVT EQGGLRLFTDVVQGERLLLMYSSQEGLLQRSLNAMRIEPGYGVDVELQPIGALIIFCA GCRLALGDMLCQFVEQSQARLGKIPFITPFTFGEQGRLPNGELAHGNLMVSSVIFLTR " misc_feature 1324972..1326126 /locus_tag="B565_1199" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3287" /db_xref="CDD:33097" misc_feature 1325050..1325634 /locus_tag="B565_1199" /note="FIST N domain; Region: FIST; pfam08495" /db_xref="CDD:149518" misc_feature 1325635..1326075 /locus_tag="B565_1199" /note="FIST C domain; Region: FIST_C; pfam10442" /db_xref="CDD:151019" gene 1326170..1328266 /locus_tag="B565_1200" /db_xref="GeneID:10487117" CDS 1326170..1328266 /locus_tag="B565_1200" /codon_start=1 /transl_table=11 /product="two-component system hybrid sensor histidine kinase/response regulator" /protein_id="YP_004391852.1" /db_xref="GI:330828900" /db_xref="GeneID:10487117" /translation="MIGNSELEALGDKLQTTLVDLMRCREREAKYRHESQTLLGGVAT LADAKTLEQVLESLIQVLKPFIGFEHADVVAWEGEQGSTHLSTEPMLSARSWRMTPAF ARAISGETLVIYDPAQLPELAPLASEPGWASVMLTGLQAPGFTATLICRHARAGTFDL TSKAAMERCRPLIAQALVNITYRARLQEQVAVKTEALQASERRFRSFAAMASDWFWET DAEHRLSYASEPGYLDEMTPQATRPTLYDYVCNKQSCDAQKYLQLLDLRQPVRGVRMQ VALQHGPCWMEVSAEPCFDHDGLFIGYRGTARDISNQIRREEELARARDEAEAANRAK SQFLAMMTHEIRSPMNAVLGMLDLVQHAELAPEQQSLLRHATHSARLLQTIIDDVLDF SKIESQTLVFHCETLQPVQLCQSLVEPLQARATAKGIALVYRVDESVPRELQGDPMRL SQVMGNLLDNALKFTEQGQVTLHLGWQDEKLLISVSDTGIGIADADQALLFEPFSQVD NSATRRFSGTGLGLAISKRLVTLMGGEIHLKSEPGKGSCFWFELPGMALPCHSQPQRE EGASALLPLDVLVVEDSPVNQLVVSLMLQKLVGKVRLAANGLEALAQVDEQIPDLILM DMRMPLMDGLEATRRLRELGCTMPIIALTANAMAEDKACCLAQGMDDFLAKPITLSRL RECLQRHFGQRLPTRG" misc_feature 1327169..1327351 /locus_tag="B565_1200" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature order(1327178..1327180,1327190..1327192,1327202..1327204, 1327211..1327213,1327223..1327225,1327232..1327234, 1327280..1327282,1327292..1327294,1327301..1327303, 1327313..1327315,1327322..1327324,1327334..1327336) /locus_tag="B565_1200" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature 1327196..1327198 /locus_tag="B565_1200" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature 1327517..1327825 /locus_tag="B565_1200" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(1327535..1327537,1327547..1327549,1327556..1327558, 1327622..1327624,1327628..1327630,1327634..1327636, 1327640..1327645,1327724..1327735,1327781..1327783, 1327787..1327789,1327802..1327807,1327811..1327813) /locus_tag="B565_1200" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 1327547..1327549 /locus_tag="B565_1200" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(1327634..1327636,1327640..1327642,1327724..1327726, 1327730..1327732) /locus_tag="B565_1200" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature 1327898..1328221 /locus_tag="B565_1200" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature 1327901..1328239 /locus_tag="B565_1200" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(1327910..1327915,1328042..1328044,1328066..1328068, 1328126..1328128,1328183..1328185,1328192..1328197) /locus_tag="B565_1200" /note="active site" /db_xref="CDD:29071" misc_feature 1328042..1328044 /locus_tag="B565_1200" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(1328051..1328056,1328060..1328068) /locus_tag="B565_1200" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 1328192..1328200 /locus_tag="B565_1200" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" gene complement(1328516..1329091) /locus_tag="B565_1201" /db_xref="GeneID:10487118" CDS complement(1328516..1329091) /locus_tag="B565_1201" /codon_start=1 /transl_table=11 /product="ATP-dependent protease La (LON) domain-containing protein" /protein_id="YP_004391853.1" /db_xref="GI:330828901" /db_xref="GeneID:10487118" /translation="MKLQPLALFPLPSHILPGGKLPLRLFEPRHLQMLKESFINDQGF GIVMEESTTSGQSGRILPVGTRVKVTDFYTLNDGLLGVTVLGLERFCIHEMETDEMGL RRAKVEMLPNWPSTHSDFNDKLLVNRLREVFEQYPELDELYPDKRFEDAAWLCQRWLE ILPMPIYEKQMLIAKQNSEAARKFLHRLISQ" misc_feature complement(1328519..1329076) /locus_tag="B565_1201" /note="ATP-dependent protease La (LON) domain; Region: LON; pfam02190" /db_xref="CDD:190239" misc_feature complement(1328519..1329076) /locus_tag="B565_1201" /note="Found in ATP-dependent protease La (LON); Region: LON; cl01056" /db_xref="CDD:141077" gene complement(1329195..1329833) /locus_tag="B565_1202" /db_xref="GeneID:10487119" CDS complement(1329195..1329833) /locus_tag="B565_1202" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator, LuxR family" /protein_id="YP_004391854.1" /db_xref="GI:330828902" /db_xref="GeneID:10487119" /translation="MDEMKYTVLVVDDHPLMRKGIVQLLALEENMEVTGEASNGTDAV ALAKESEPDLILLDLNMKGLSGLDTLKALRAEEITSRVVILTVSDARQDVVALLKAGA DGYLLKDTEPDLLLAQLADVMTGKQILSEPLRPYLENIYELDHLQQKLESLTRREMQI LREIAKGLSNKQVASVLHISEGTVKVHVKSLLKKLEAQSRVEAAVMYLEQRN" misc_feature complement(1329198..1329833) /locus_tag="B565_1202" /note="transcriptional regulator NarL; Provisional; Region: PRK10651" /db_xref="CDD:182619" misc_feature complement(1329465..1329809) /locus_tag="B565_1202" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(1329507..1329512,1329519..1329521, 1329576..1329578,1329636..1329638,1329660..1329662, 1329795..1329800)) /locus_tag="B565_1202" /note="active site" /db_xref="CDD:29071" misc_feature complement(1329660..1329662) /locus_tag="B565_1202" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(1329636..1329644,1329648..1329653)) /locus_tag="B565_1202" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(1329504..1329512) /locus_tag="B565_1202" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(1329216..1329377) /locus_tag="B565_1202" /note="C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors...; Region: LuxR_C_like; cd06170" /db_xref="CDD:99777" misc_feature complement(order(1329234..1329236,1329267..1329281, 1329285..1329290,1329294..1329299,1329321..1329329, 1329366..1329374)) /locus_tag="B565_1202" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:99777" misc_feature complement(order(1329219..1329221,1329228..1329236, 1329327..1329329,1329333..1329335,1329339..1329341)) /locus_tag="B565_1202" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:99777" gene complement(1329833..1331545) /locus_tag="B565_1203" /db_xref="GeneID:10487120" CDS complement(1329833..1331545) /locus_tag="B565_1203" /codon_start=1 /transl_table=11 /product="two-component system nitrate/nitrite sensor histidine kinase NarQ" /protein_id="YP_004391855.1" /db_xref="GI:330828903" /db_xref="GeneID:10487120" /translation="MGKRFRVHSVSSAIGRAMVLILFMASLIALVAMVTLFYSVPDAK AINLSGSLRMQAYRMAYEIERGDSVLGRLSQFEETLHAEELQETQRWITPASLRRTYG EVLGQWQVMRQHIEDRTPRRYTDNTEQFVAAIDNFVNQMQYHVEFKVRMLALAEGLGL LAIITIAWFTVRFTRQQVVAPLNQLVYCARQIQRQDFDLKLPAHGENELGELSRAFVT MADELGKLYRELENKVEEKTAKLQQANDTLSFLYSTAQKLHAAPLSTRTLIKLLDRAA AHQHIDHIRLTRFEHNAMPVYISGRTGWPGDLDAVASFYLQMDEQEFGRLDIISQHPI DERLIKNFTMLLAQVLHKDQTLLQQQRLLLMEERAVIARELHDSLAQALSYLKIQSTL LKRSYAKEQHDKAQEAMQQIDEGLSNAYTQLRELLGTFRLTIGDANLGEAIRVMLDQL QPQTQAEIRFHYGLADNDLEAGQHIHILQLIREAVLNAIKHANAQVIDVSCETLASGN IEVQISDDGVGIGLASSAINHYGLSIMNERASKLHGLLTINEQQPQGTCVHLTFPTSL ARDA" misc_feature complement(1329839..1331524) /locus_tag="B565_1203" /note="nitrate/nitrite sensor protein NarQ; Provisional; Region: PRK10935" /db_xref="CDD:182850" misc_feature complement(1330877..1331041) /locus_tag="B565_1203" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(1330253..1330447) /locus_tag="B565_1203" /note="Histidine kinase; Region: HisKA_3; pfam07730" /db_xref="CDD:191831" misc_feature complement(1329860..1330117) /locus_tag="B565_1203" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(1329872..1329874,1329878..1329883, 1329896..1329898,1329902..1329904,1329950..1329961, 1329986..1329991,1329995..1329997,1330001..1330003, 1330007..1330009,1330076..1330078,1330085..1330087, 1330097..1330099)) /locus_tag="B565_1203" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(1330085..1330087) /locus_tag="B565_1203" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(1329953..1329955,1329959..1329961, 1329989..1329991,1329995..1329997)) /locus_tag="B565_1203" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene 1331752..1332747 /locus_tag="B565_1204" /db_xref="GeneID:10487121" CDS 1331752..1332747 /locus_tag="B565_1204" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase subunit MoaA" /protein_id="YP_004391856.1" /db_xref="GI:330828904" /db_xref="GeneID:10487121" /translation="MLPLEDGFSRRFYYLRLSVTDVCNFRCTYCLPDGYRPPEGHKTG RQPFLSIDEIRRVVSGFAAMGTRKVRITGGEPSLRRDFTEIVKVIATTPGIEKVAMTT NGYRLKERAQEWFDAGLNALNVSVDSLDPRQFHQITGENKLAEVMEGIEAALAAGFKS VKINAVLLKGLNDYQLDAFLGWIRHKPIELRFIELMQTGEMDTLFRDHHVSGEQIKQR LLESGWVQQLRGTDDGPAQVFMHPDSQGGVGLIMPYSKDFCAGCNRLRVSSLGKLHLC LFGDNGIDLRDLLGADGQSDELQQRIRAALAGKSATHRLHEGNAGITPHLASIGG" misc_feature 1331752..1332744 /locus_tag="B565_1204" /note="molybdenum cofactor biosynthesis protein A; Reviewed; Region: moaA; PRK00164" /db_xref="CDD:178909" misc_feature 1331800..1332354 /locus_tag="B565_1204" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature order(1331818..1331820,1331824..1331826,1331830..1331832, 1331836..1331841,1331857..1331859,1331965..1331967, 1331971..1331976,1332052..1332060,1332124..1332126, 1332247..1332249,1332340..1332345) /locus_tag="B565_1204" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" misc_feature 1332313..1332690 /locus_tag="B565_1204" /note="Molybdenum Cofactor Synthesis C; Region: Mob_synth_C; pfam06463" /db_xref="CDD:115139" gene 1332987..1333529 /locus_tag="B565_1205" /db_xref="GeneID:10487122" CDS 1332987..1333529 /locus_tag="B565_1205" /codon_start=1 /transl_table=11 /product="ferredoxin-type protein NapF" /protein_id="YP_004391857.1" /db_xref="GI:330828905" /db_xref="GeneID:10487122" /translation="MPDEIDLARRGLFRGRLRTAEPPVQLPWSVNWSAFVADCTRCGD CLAACPEQILVNGEGGFPVVDFQRGECTFCTECVTVCKAPLFRPTSESPWHYKAHIEA NCLANGQVFCQRCQDSCEPNAIRFIPVLGRVPTPTVEPDRCNGCGACVQDCPVGSIKV DGRAAPSGGASQPTLKQESE" misc_feature 1332999..1333469 /locus_tag="B565_1205" /note="ferredoxin-type protein; Provisional; Region: PRK10194" /db_xref="CDD:182296" gene 1333526..1333813 /locus_tag="B565_1206" /db_xref="GeneID:10487123" CDS 1333526..1333813 /locus_tag="B565_1206" /codon_start=1 /transl_table=11 /product="NapD protein" /protein_id="YP_004391858.1" /db_xref="GI:330828906" /db_xref="GeneID:10487123" /translation="MSQKPCDTEATMDQEFHVSSLVVLTQPPLRHQLAEQIGALEGAE IHAVSDEGKLVVTLEGPSQRPIMAAIDAIQAMPGVLSAALIYHQFDELGGH" misc_feature 1333568..1333801 /locus_tag="B565_1206" /note="NapD protein; Region: NapD; cl01163" /db_xref="CDD:186363" gene 1333915..1336404 /locus_tag="B565_1207" /db_xref="GeneID:10487124" CDS 1333915..1336404 /locus_tag="B565_1207" /codon_start=1 /transl_table=11 /product="periplasmic nitrate reductase, large subunit" /protein_id="YP_004391859.1" /db_xref="GI:330828907" /db_xref="GeneID:10487124" /translation="MKLSRRDFMKANAVAAAAAVAGVSAPTLAANLITSTDKTAIHWD KAPCRFCGTGCSVLVGSQDGRVVATQGDPDAPVNRGLNCIKGYFLSKIMYGQDRLTQP MLRMKNGQFDKDGDFAPISWDQAFDIMAEKFKATLKEKGPTAVGMFGSGQWTVWEGYA AAKLMKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNM AEMHPILWSRMSDRRLSNPDVQVHVLSTFEHRSFELADNGMVFTPQTDLAILNYVANY IIQNDKVNWDFVNKHTVFKKGVTDIGYGLRPTDPLQQKAKNPDSGDATPMTFEEFAKF VADYDVESVSKLSGVSKEKLEKLAKLYADPGKKVVSYWTMGFNQHTRGVWANNLCYNI HLLTGKISEPGNGPFSLTGQPSACGTAREVGTFAHRLPADMVVTEPKHRVIAEQIWKL PEGTIPDKVGFHAVLQDRMLKDGKLNAYWVMCNNNMQAGPNMNTDRLPGYRDPRNFIV VSDPYPTVTAQAADLILPTAMWVEKEGAYGNAERRTQFWHQQVKAPEGAKSDLWQLME FSKRFKVEEVWPAELIAKMPEVKGKTLFDVLYANGQVNQFPKEQSKGLLNDEAEHFGF YVQKGLFEEYATFGRGHGHDLAPFDQYHEARGLRWPVVDGKETLWRYREGFDPYVKAG EGVRFYGKPDGKAVIFALPFEPAAESPDQEYDLWLSTGRVLEHWHTGTMTRRVPELYR AFPDAVLFMHPDDAKARGVRRGEEVIVSSRRGEVKTRVETRGRNRPPKGLVFMPFFDA SQLVNKLTLDATDPLSKETDYKKCAVKVMKA" misc_feature 1333915..1336401 /locus_tag="B565_1207" /note="nitrate reductase catalytic subunit; Provisional; Region: PRK13532" /db_xref="CDD:184119" misc_feature 1334047..1336029 /locus_tag="B565_1207" /note="NasA, and NarB catalyze the reduction of nitrate to nitrite. Monomeric Nas is located in the cytoplasm and participates in nitrogen assimilation. Dimeric Nap is located in the periplasm and is coupled to quinol oxidation via a membrane-anchored...; Region: MopB_Nitrate-R-NapA-like; cd02754" /db_xref="CDD:29450" misc_feature order(1334056..1334058,1334062..1334067,1334077..1334079, 1334161..1334163,1334584..1334586) /locus_tag="B565_1207" /note="[4Fe-4S] binding site [ion binding]; other site" /db_xref="CDD:29450" misc_feature order(1334167..1334169,1334368..1334370,1334443..1334445, 1334455..1334457,1334554..1334565,1334572..1334577, 1334647..1334655,1334704..1334706,1334710..1334712, 1335031..1335039,1335046..1335048,1335145..1335150, 1335361..1335366,1335376..1335378,1335442..1335453, 1335493..1335501,1335511..1335513,1335592..1335594) /locus_tag="B565_1207" /note="molybdopterin cofactor binding site; other site" /db_xref="CDD:29450" misc_feature 1336048..1336401 /locus_tag="B565_1207" /note="NasA, and NarB catalyze the reduction of nitrate to nitrite. Monomeric Nas is located in the cytoplasm and participates in nitrogen assimilation. Dimeric Nap is located in the periplasm and is coupled to quinol oxidation via a membrane-anchored...; Region: MopB_CT_Nitrate-R-NapA-like; cd02791" /db_xref="CDD:30323" misc_feature order(1336069..1336083,1336087..1336098,1336297..1336299, 1336321..1336323,1336369..1336374) /locus_tag="B565_1207" /note="molybdopterin cofactor binding site; other site" /db_xref="CDD:30323" gene 1336421..1337158 /locus_tag="B565_1208" /db_xref="GeneID:10487125" CDS 1336421..1337158 /locus_tag="B565_1208" /codon_start=1 /transl_table=11 /product="periplasmic nitrate reductase subunit NapG" /protein_id="YP_004391860.1" /db_xref="GI:330828908" /db_xref="GeneID:10487125" /translation="MSRSRRQFLADMAKGACGVGLLGVGLGGVARQQAQAVPAQALRP PAALDETEFLGACVRCGLCVEACPYDTLKLARLFDPVTTGTPYFKARAVPCEMCDDIP CVVACPSGALDQQMTDIDQARMGVAVLIDHETCLNYLGLRCDVCYRVCPLIDKAITLE LQHNQRTGKHAMFLPTVHSDVCTGCGKCEHACVLEEAAIKVVPRQLAKGELGHHYRLG WEEKAKAGNKSLIGDRLTLPTRKPEGL" misc_feature 1336421..1337152 /locus_tag="B565_1208" /note="quinol dehydrogenase periplasmic component; Provisional; Region: napG; PRK09476" /db_xref="CDD:181890" gene 1337155..1338030 /locus_tag="B565_1209" /db_xref="GeneID:10487126" CDS 1337155..1338030 /locus_tag="B565_1209" /codon_start=1 /transl_table=11 /product="ferredoxin-type protein NapH" /protein_id="YP_004391861.1" /db_xref="GI:330828909" /db_xref="GeneID:10487126" /translation="MSRYPGEEARIKLGWWRSHRFLLLRRLSQFSVLGLFLLGPLAGI WILKGNLSSSLLLETVPLTDPLTLLQSLAAGHWPITTLWLGAAIVLAGYWLVGGRVFC SWVCPVNLITDAAAWLRGRLGLKGNGQFSRATRYWLLAMVLVVPAVVGVMAWELVNPV SLAMRGLLFGMGAGWALLAALFLFDLFVVERGWCGHLCPVGAFYALVNRVGFIKISAK GRERCNNCMDCYAVCPERPILRGPLHGAKRGHGPLIAAQECTNCGRCIDVCAEQVFEI TVGFAVKAEKTSENK" misc_feature 1337194..1338012 /locus_tag="B565_1209" /note="quinol dehydrogenase membrane component; Provisional; Region: napH; PRK09477" /db_xref="CDD:181891" misc_feature 1337389..1337529 /locus_tag="B565_1209" /note="4Fe-4S binding domain; Region: Fer4_5; pfam12801" /db_xref="CDD:193277" misc_feature <1337818..>1337973 /locus_tag="B565_1209" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" gene 1338030..1338485 /locus_tag="B565_1210" /db_xref="GeneID:10487127" CDS 1338030..1338485 /locus_tag="B565_1210" /codon_start=1 /transl_table=11 /product="periplasmiC nitrate reductase, diheme cytochrome c subunit" /protein_id="YP_004391862.1" /db_xref="GI:330828910" /db_xref="GeneID:10487127" /translation="MKKLIGAMLACLMAGSLMAAAPEITNSTGGLKSERGATDLVTDA TAAPLKNFRKDGAPYDRQYMHQPPLIPHDIRNYEVDTKVNKCLACHSFKNASAMKAPK ISPTHFETRDGLTLGEVSPRRYFCLQCHVPQADAKPLVENTFKPVEALN" misc_feature 1338054..1338470 /locus_tag="B565_1210" /note="Nitrate reductase cytochrome c-type subunit (NapB); Region: NapB; cl01153" /db_xref="CDD:194054" gene 1338497..1339087 /locus_tag="B565_1211" /db_xref="GeneID:10487128" CDS 1338497..1339087 /locus_tag="B565_1211" /codon_start=1 /transl_table=11 /product="periplasmic nitrate reductase c subunit" /protein_id="YP_004391863.1" /db_xref="GI:330828911" /db_xref="GeneID:10487128" /translation="MKLPGFIQRLWTTFKSPSKAALWVILLMGFFGGVIFWGGFNTAM EASNTEAFCTSCHEMKDNVFEEYRDTIHYANRSGVRASCPDCHVPHEWTYKIIRKVQA SKELWGMITGKVDTREKFESHRREMAEREWQRMKETDSRECRNCHNFEYMDFSLQGQR AAKMHSTNLASGESTCIDCHKGIAHQLPDMTGVKGF" misc_feature 1338512..1339069 /locus_tag="B565_1211" /note="cytochrome c-type protein NapC; Provisional; Region: PRK10617; cl09485" /db_xref="CDD:186859" misc_feature 1338539..1339066 /locus_tag="B565_1211" /note="NapC/NirT cytochrome c family, N-terminal region; Region: Cytochrom_NNT; pfam03264" /db_xref="CDD:190582" gene 1339330..1339836 /locus_tag="B565_1212" /db_xref="GeneID:10487129" CDS 1339330..1339836 /locus_tag="B565_1212" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein B" /protein_id="YP_004391864.1" /db_xref="GI:330828912" /db_xref="GeneID:10487129" /translation="MGQKHNAFIPLKIAVLTVSDSRTAADDSSGDYLVSALTDAGHQL ADRALCPDNLFRIRARVSEWIADEGVQVVLINGGTGFNEQNRVPEAVGVLFERTVQGF GEMFRQLSFAEIKGSAMQSRALAGLANRTLICCLPGSTGACQLGWEQLIRDQLDARTK PCNFVSHL" misc_feature 1339360..1339797 /locus_tag="B565_1212" /note="MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea...; Region: MogA_MoaB; cd00886" /db_xref="CDD:58167" misc_feature order(1339561..1339569,1339657..1339659,1339738..1339743, 1339753..1339755,1339762..1339764) /locus_tag="B565_1212" /note="MPT binding site; other site" /db_xref="CDD:58167" misc_feature order(1339567..1339569,1339573..1339578,1339582..1339584, 1339594..1339596,1339618..1339626,1339639..1339641, 1339648..1339653,1339684..1339686,1339693..1339695) /locus_tag="B565_1212" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:58167" gene 1339846..1340370 /locus_tag="B565_1213" /db_xref="GeneID:10487130" CDS 1339846..1340370 /locus_tag="B565_1213" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase subunit MoaC" /protein_id="YP_004391865.1" /db_xref="GI:330828913" /db_xref="GeneID:10487130" /translation="MNQTDPKQTQPNLTHLNQSGEAHMVDVTDKLVTEREARAEAFVA MAPETLALILSGQHHKGDVFATARIAGIMAAKKTSDLIPLCHPLALTKVEVEIVPLAE QNRVHIRTLCKLSGKTGVEMEALTAASVAALTIYDMCKAVQKDIVIEQVRLVEKKGGK SGHFQLGSNSGEQA" misc_feature 1339915..1340334 /locus_tag="B565_1213" /note="MoaC family, prokaryotic and eukaryotic. Members of this family are involved in molybdenum cofactor (Moco) biosynthesis, an essential cofactor of a diverse group of redox enzymes. MoaC, a small hexameric protein, converts, together with MoaA, a...; Region: MoaC_PE; cd01420" /db_xref="CDD:29626" misc_feature order(1339915..1339926,1340029..1340106,1340113..1340133, 1340287..1340322) /locus_tag="B565_1213" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:29626" misc_feature order(1340023..1340031,1340077..1340091,1340272..1340280) /locus_tag="B565_1213" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29626" misc_feature order(1340023..1340025,1340071..1340073,1340092..1340094, 1340098..1340103,1340197..1340199,1340206..1340214, 1340221..1340223,1340254..1340256,1340263..1340265) /locus_tag="B565_1213" /note="putative active site [active]" /db_xref="CDD:29626" gene 1340367..1340612 /locus_tag="B565_1214" /db_xref="GeneID:10487131" CDS 1340367..1340612 /locus_tag="B565_1214" /codon_start=1 /transl_table=11 /product="molybdopterin synthase small subunit" /protein_id="YP_004391866.1" /db_xref="GI:330828914" /db_xref="GeneID:10487131" /translation="MIKVLFFAQVRELVACDELSLPCDYATAEQLRAALCERGDKWAL ALEAGKLLVAVNQTLVPLDTPINDGDEVAFFPPVTGG" misc_feature 1340370..1340609 /locus_tag="B565_1214" /note="Ubiquitin domain of MoaD-like proteins; Region: MoaD; cd00754" /db_xref="CDD:176354" misc_feature order(1340385..1340393,1340397..1340402,1340532..1340534, 1340577..1340579,1340592..1340600,1340607..1340609) /locus_tag="B565_1214" /note="MoaE interaction surface [polypeptide binding]; other site" /db_xref="CDD:176354" misc_feature order(1340385..1340390,1340397..1340402,1340592..1340594, 1340598..1340600,1340607..1340609) /locus_tag="B565_1214" /note="MoeB interaction surface [polypeptide binding]; other site" /db_xref="CDD:176354" misc_feature 1340607..1340609 /locus_tag="B565_1214" /note="thiocarboxylated glycine; other site" /db_xref="CDD:176354" gene 1340615..1341088 /locus_tag="B565_1215" /db_xref="GeneID:10487132" CDS 1340615..1341088 /locus_tag="B565_1215" /codon_start=1 /transl_table=11 /product="molybdopterin converting factor subunit 2" /protein_id="YP_004391867.1" /db_xref="GI:330828915" /db_xref="GeneID:10487132" /translation="MSEATITDRILVQREDFSLADEYARLATRPDSGAIVTFVGKVRD FNQGEEVKGLALEHYPGMTEKALADIVQEARRRWPLQECTLIHRIGELWLGDQIVLVA VSSAHRDAAFDACHFIMDFLKTRAPFWKKELTAEGVQRWVEALDRDNAAAARWQA" misc_feature 1340663..1341040 /locus_tag="B565_1215" /note="MoaE family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and...; Region: MoaE; cd00756" /db_xref="CDD:58647" misc_feature order(1340681..1340683,1340693..1340695,1340711..1340713, 1340717..1340731,1340735..1340737,1340741..1340743, 1340903..1340905,1340930..1340932,1340936..1340938, 1340960..1340962,1340972..1340974) /locus_tag="B565_1215" /note="MoaE homodimer interface [polypeptide binding]; other site" /db_xref="CDD:58647" misc_feature order(1340783..1340785,1340789..1340791,1340798..1340800, 1340807..1340809,1340819..1340821,1340873..1340875, 1340981..1340986,1340990..1340992,1340996..1341004, 1341035..1341037) /locus_tag="B565_1215" /note="MoaD interaction [polypeptide binding]; other site" /db_xref="CDD:58647" misc_feature order(1340981..1340983,1341002..1341004) /locus_tag="B565_1215" /note="active site residues [active]" /db_xref="CDD:58647" gene 1341176..1341904 /locus_tag="B565_1216" /db_xref="GeneID:10487133" CDS 1341176..1341904 /locus_tag="B565_1216" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter periplasmic binding protein" /protein_id="YP_004391868.1" /db_xref="GI:330828916" /db_xref="GeneID:10487133" /translation="MKPLLSVVIAGVCAATLHTGAVQADEVKVAVAANFKGTIERIGK EFTAKTGHTLAISSAATGVLYTQISHGAPFDLFLSADAATPEKLEKERKGSDRFTYAI GQLGLWKKGGPAPDEATLRSWKGNLAIANARTAPYGAAAMATLTHLKIDPKQYRLLTG ANIGQTWQFVDTGNAELGFVAWANLVEAGKTGEAWAVPASFYPPIEQQGLVLKKGSAV EALVAWLKGPGQAQIKAAGYALPQ" misc_feature 1341269..1341886 /locus_tag="B565_1216" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene 1342016..1342696 /locus_tag="B565_1217" /db_xref="GeneID:10487134" CDS 1342016..1342696 /locus_tag="B565_1217" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter permease" /protein_id="YP_004391869.1" /db_xref="GI:330828917" /db_xref="GeneID:10487134" /translation="MSEGDLLAVWLTLKLAASTTAILLLLAPPLAWWLSRSQNRLRPL VEALVALPLVLPPTVLGFYLLLAFSPEYGFGAWWRDTFGAPLAFSFLGLLFASILYSL PFVVQPLTSAFVNMGNKELEAAATLGLGPLERFFHIILPMTLPSFVMAAALGFAHTLG EFGVVLMIGGNIPGETQVLSIALFDHVEAMDYQNAHILAGGLMAFSLVMLVLVYGVLQ RRQRRVFG" misc_feature <1342307..1342636 /locus_tag="B565_1217" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(1342310..1342315,1342319..1342321,1342325..1342327, 1342334..1342339,1342343..1342345,1342355..1342360, 1342367..1342369,1342418..1342420,1342460..1342465, 1342472..1342474,1342493..1342504,1342511..1342516, 1342553..1342558,1342586..1342591,1342598..1342603, 1342607..1342612,1342619..1342624,1342631..1342636) /locus_tag="B565_1217" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(1342370..1342408,1342424..1342429,1342439..1342441) /locus_tag="B565_1217" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" misc_feature order(1342511..1342513,1342547..1342549,1342556..1342558, 1342586..1342588) /locus_tag="B565_1217" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" gene 1342693..1343793 /locus_tag="B565_1218" /db_xref="GeneID:10487135" CDS 1342693..1343793 /locus_tag="B565_1218" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter ATP-binding protein" /protein_id="YP_004391870.1" /db_xref="GI:330828918" /db_xref="GeneID:10487135" /translation="MNQPATIPQDNALHRHALSLNARREFGPFTLDCALTLELGGILG LFGPSGCGKSTLLRIIAGLDRRSGDRLLWRDREYAQLLPEARRIGLVFQDSRLFPHLT VLGNLQLAARKGRGRWQPEALAARLGFAELLGQPAHALSGGQRQRVALGRALLAEPDL LLLDEPFSALDRRSRIHQAHVLKGLQQESGIPMIFVSHAMEEVSLLCDQLVLLEGGRV EAQGRPSEIFARTDLSLASRDDAGVMLAATLSHYDEEEQMAILQLGEQQLRVTMTHVP DESGPLQIKVAGRDVVIATAPIEHSSLSNCLVTRLLAVREVRPGQTLLQLALGEQILL ARITSRSARRLALAPKQQIYAYIKAVSLVSEG" misc_feature 1342744..1343778 /locus_tag="B565_1218" /note="molybdenum ABC transporter, ATP-binding protein; Region: modC_ABC; TIGR02142" /db_xref="CDD:131197" misc_feature 1342744..1343358 /locus_tag="B565_1218" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 1342831..1342854 /locus_tag="B565_1218" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(1342840..1342845,1342849..1342857,1342969..1342971, 1343182..1343187,1343284..1343286) /locus_tag="B565_1218" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 1342960..1342971 /locus_tag="B565_1218" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 1343110..1343139 /locus_tag="B565_1218" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 1343170..1343187 /locus_tag="B565_1218" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 1343194..1343205 /locus_tag="B565_1218" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 1343272..1343292 /locus_tag="B565_1218" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene 1343885..1344661 /locus_tag="B565_1219" /db_xref="GeneID:10487136" CDS 1343885..1344661 /locus_tag="B565_1219" /codon_start=1 /transl_table=11 /product="alpha/beta fold family hydrolase" /protein_id="YP_004391871.1" /db_xref="GI:330828919" /db_xref="GeneID:10487136" /translation="MRRNQVMKFNGLALRSAGEGPLLLLLHGLGSSSLDWQAQIERFS EHYRVVALDLRGHGQSMQEGPFDVATLAADVVSWLDEQPEPAWVVGLSLGAMVALELA LQLPHKVQGLVLVNGFSEFLLETPKEQERYAQRLKWLRWFGMRPLAWWLGRELFPGPD LAKVRHTFRLRFVRNKKKTYKALLEALPGWSVRARLGSIWQPVAIISTSHDYLPLAKR VEQFAALPNATIHTPNGHHAWPAEDPSGFNHLLQRILTTH" misc_feature 1343987..1344628 /locus_tag="B565_1219" /note="Alpha/beta hydrolase family; Region: Abhydrolase_6; pfam12697" /db_xref="CDD:193173" misc_feature 1344002..>1344199 /locus_tag="B565_1219" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" gene complement(1344732..1345487) /locus_tag="B565_1220" /db_xref="GeneID:10487137" CDS complement(1344732..1345487) /locus_tag="B565_1220" /codon_start=1 /transl_table=11 /product="molybdopterin synthase sulfurylase MoeB" /protein_id="YP_004391872.1" /db_xref="GI:330828920" /db_xref="GeneID:10487137" /translation="MSEILSDAELLRYNRQIILKSFDFEGQEALKQARVLVIGAGGLG CAASQYLAVAGVGQLTLVDFDKVELSNLQRQVLHNDERIGHYKVDSAAQSLRALNPWL NVETHAAVADEALLDTLLPRHQLVLDCTDNLAIRNLLNQKARQHRVPLVSGAAIRLEG QLCSFTWQEDEPCYACLSALFGEQALTCVEAGVLAPVVGLVGSLQALEAIKLLAGMGK NYSGRLLMIDGLSGTFREMKLPKRPDCPVCSHP" misc_feature complement(1344753..1345487) /locus_tag="B565_1220" /note="molybdopterin biosynthesis protein MoeB; Provisional; Region: PRK05690" /db_xref="CDD:180204" misc_feature complement(1344771..1345454) /locus_tag="B565_1220" /note="ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of...; Region: ThiF_MoeB_HesA_family; cd00757" /db_xref="CDD:30111" misc_feature complement(order(1345083..1345085,1345101..1345103, 1345227..1345229,1345266..1345268,1345293..1345295, 1345299..1345301,1345359..1345361,1345365..1345367, 1345371..1345373)) /locus_tag="B565_1220" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:30111" misc_feature complement(order(1344774..1344779,1344783..1344785, 1344804..1344806,1344816..1344818,1345005..1345007, 1345011..1345013,1345023..1345028,1345080..1345082, 1345092..1345100,1345359..1345361)) /locus_tag="B565_1220" /note="substrate interface [chemical binding]; other site" /db_xref="CDD:30111" gene complement(1345484..1346710) /locus_tag="B565_1221" /db_xref="GeneID:10487138" CDS complement(1345484..1346710) /locus_tag="B565_1221" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein MoeA" /protein_id="YP_004391873.1" /db_xref="GI:330828921" /db_xref="GeneID:10487138" /translation="MGFDTSGLLPLSDALQGMLEQLACCCDSEQLPLPEALGRVLASD IASPLAVPPFDNSAMDGYAVRLADLASGTPLIMAGKAFAGQPYQGEWPAGHCVRIMTG APVPAGTDAVVMQEETQADGDRITFLAQPEPGQNIRRAGSDIGKGACVLPAGTRLTPR EMPLLASLGVATVTVRRPLKVAIFSTGDELKPVGTPLAHGDIYDSNRYGVRAMLARMG CDCLDLGIIPDDPAQLRAAFIRADEEADVLITTGGVSVGEADFTKQLLDELGEIGFWK LAIKPGKPFAFGRLPRAWFFGLPGNPVSAMVTFDQLVQPALAKLAGQHFERPLQLQAI AAEPLKKSPGRLDFQRGILSQGPNGLEVRSTGSQDSAVFSSLSRANCYIVLERERGRV AAGETVTVEPFGGLLL" misc_feature complement(1345490..1346698) /locus_tag="B565_1221" /note="molybdopterin biosynthesis protein MoeA; Provisional; Region: PRK10680" /db_xref="CDD:182643" misc_feature complement(1345502..1346674) /locus_tag="B565_1221" /note="MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and...; Region: MoeA; cd00887" /db_xref="CDD:58168" misc_feature complement(order(1345514..1345516,1345598..1345600, 1345718..1345720,1346087..1346089,1346096..1346098, 1346102..1346104,1346204..1346206,1346210..1346215, 1346222..1346224,1346228..1346239,1346282..1346284, 1346609..1346611)) /locus_tag="B565_1221" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:58168" misc_feature complement(order(1345952..1345954,1346024..1346026, 1346144..1346146,1346150..1346155)) /locus_tag="B565_1221" /note="putative functional site; other site" /db_xref="CDD:58168" misc_feature complement(order(1345790..1345792,1345799..1345801, 1345811..1345816,1345946..1345954)) /locus_tag="B565_1221" /note="putative MPT binding site; other site" /db_xref="CDD:58168" gene 1347020..1347676 /locus_tag="B565_1222" /db_xref="GeneID:10487139" CDS 1347020..1347676 /locus_tag="B565_1222" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase 1" /protein_id="YP_004391874.1" /db_xref="GI:330828922" /db_xref="GeneID:10487139" /translation="MTTLSPEALLVRAALEAQGLETPLVTNELNSQQKREKIEGHMRS IMETLGLDLTDDSLAETPHRIAKMYVNEIFSGLDYSTFPKVTVIENKMQVDEMIMVRD ISLTSTCEHHFVTIDGMAHVAYIPRGKVIGLSKINRIVQFFARRPQVQERLTQQILLA LQTLLGTKDVAISIKATHYCVKARGVMDSTSYTTTTSLGGVFKTQPDTRAEFLGGLRG " misc_feature 1347119..1347658 /locus_tag="B565_1222" /note="Tunnelling fold (T-fold). The five known T-folds are found in five different enzymes with different functions: dihydroneopterin-triphosphate epimerase (DHNTPE), dihydroneopterin aldolase (DHNA) , GTP cyclohydrolase I (GTPCH-1), 6-pyrovoyl...; Region: TFold; cl00263" /db_xref="CDD:193736" misc_feature 1347131..1347673 /locus_tag="B565_1222" /note="GTP cyclohydrolase I; Provisional; Region: PLN03044" /db_xref="CDD:178607" misc_feature order(1347365..1347367,1347371..1347373,1347539..1347541, 1347608..1347610) /locus_tag="B565_1222" /note="active site" /db_xref="CDD:29764" gene 1348088..1349743 /locus_tag="B565_1223" /db_xref="GeneID:10487140" CDS 1348088..1349743 /locus_tag="B565_1223" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004391875.1" /db_xref="GI:330828923" /db_xref="GeneID:10487140" /translation="MNTSSMTIGKKLTAGFAVLGLMVAFIGGFSLVQFGNMNDVAIRF TDSILPAVNRTSAIGDSLGELRRYELGYFVVAAEPLKRAEYRNIASQQLNSIAQQLIA HDKTIWPEDVAERRTFDTVKSDWDRYVALHQRVQQLQDSDQLAEAQRIFLEEGVPLYT ALSKSVASLIQINHGYASESRSDIVDSYQSANLSVTIALVIGLILVVVLSVVLTRQIR DPLIMLARQAQRIANGDLGQGELQQWIRDSRFNRDELGQLGSAINRMQGSLSDLVSEI AGSVSQLSSAVEEVSAISSQSASGMAIQQNEVSQVATAMNEMQSTVNEVARNTTDAMS AAKDASRTSAAGSEVVRSSIASIEDVSVKIEQAGTVVQQLEADSANISVVLDVIRDIA GQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQDSTAEISKMIELLQSRAAE AGNAMQLSRHQMQESVGLARDAGTSIETINGAVVRITDMNTLIATATEEQNAVTEELN RSIVNIHNAADENAQGAHQIAQACVELSKLANTLHHMTQRFTL" misc_feature 1348103..1348606 /locus_tag="B565_1223" /note="Four helix bundle sensory module for signal transduction; Region: 4HB_MCP_2; pfam12729" /db_xref="CDD:193205" misc_feature <1348727..1348900 /locus_tag="B565_1223" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 1349000..1349737 /locus_tag="B565_1223" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 1349114..1349740 /locus_tag="B565_1223" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1349816..1351546) /locus_tag="B565_1224" /db_xref="GeneID:10487141" CDS complement(1349816..1351546) /locus_tag="B565_1224" /codon_start=1 /transl_table=11 /product="formate--tetrahydrofolate ligase" /protein_id="YP_004391876.1" /db_xref="GI:330828924" /db_xref="GeneID:10487141" /translation="MLSDIEISRQSPRLSIHALAERLAIPQHLLSPHGHYKGKLSLDL LTSQPKHSGKLVLVSAITPTPLGEGKTVTTLGLSMGLNHIGQPSIATIRQPSLGPVFG VKGGAAGGGHAQVVPMEEMNLHLTGDFHALTAAHNLAAAALDARLFHERKLGDQFTAK TGLPRLDIDADNILWPRTLDMNDRALRHLTIGQGGAADGVERSDRFVITAASELMAIL ALASDLKDLRQRIGRIQLARDIHGEPITAEQLEVAGAMTVLLKDALQPTLMQTTEQTP VLVHAGPFANIAHGNSSVIADRIALGLTDYVVTEAGFGSDMGLEKFFNIKSRQSGIPP ACVVLVATVRGLKANSGLLDIRPGQPLPASLQGEDLPTLKQGCANLAWHIRNARRYGV PVVVAINRFPTDSEAELALLAHEAQQAGACGAAISNAFTQGGAGASELARAVVTACEQ PGKVKLLYPDEMSLDTKLATLVECGYGGRGVQLSDKARQQLAQLSAEGWDHLPICVAK TPLSISHDPALKGVPTDFEVPIDEVKLCAGAGFVYALAGPIMTMPGLGSLPAYRHIDI DENGEIVGLS" misc_feature complement(1349819..1351546) /locus_tag="B565_1224" /note="formate--tetrahydrofolate ligase; Provisional; Region: PRK13506" /db_xref="CDD:184097" misc_feature complement(1349867..1351492) /locus_tag="B565_1224" /note="Formyltetrahydrofolate synthetase (FTHFS) catalyzes the ATP-dependent activation of formate ion via its addition to the N10 position of tetrahydrofolate. FTHFS is a highly expressed key enzyme in both the Wood-Ljungdahl pathway of autotrophic CO2...; Region: FTHFS; cd00477" /db_xref="CDD:73210" misc_feature complement(order(1351163..1351165,1351265..1351267)) /locus_tag="B565_1224" /note="Potassium binding sites [ion binding]; other site" /db_xref="CDD:73210" misc_feature complement(order(1351178..1351186,1351262..1351267)) /locus_tag="B565_1224" /note="Cesium cation binding sites [ion binding]; other site" /db_xref="CDD:73210" gene 1351614..1352030 /locus_tag="B565_1225" /db_xref="GeneID:10487142" CDS 1351614..1352030 /locus_tag="B565_1225" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391877.1" /db_xref="GI:330828925" /db_xref="GeneID:10487142" /translation="MTKTILFGEGEVRQNPVRLDLNALYHPPKQPMTALGIVSALVPL FGFGWQAMTQDPETQLRHEIRKRVNKHKTDEANLILILQLAAMFDCPEIEVALPYALS EQQLSVVRTRLPRWQLHPEQERLLAKLVPAAAPGQR" gene complement(1352073..1352975) /locus_tag="B565_1226" /db_xref="GeneID:10487143" CDS complement(1352073..1352975) /locus_tag="B565_1226" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004391878.1" /db_xref="GI:330828926" /db_xref="GeneID:10487143" /translation="MDQIAAMRTFIKVVECQSFTKAANQLGISVAMASKLMQQLEESL ATRLLSRTTRQVNPTEAGQFYYQRSLALLAELEETHSQLTHHNQQPNGTLKLSVPMDF GYLHLSPALPLFRQRFPDLKLDIEYSDRRVALVEEGFDLALRIGHLSDSSLVARQLAT IRVELCASPAYLARKGRPGKPEDLKQHDCLIYTLTQPEWHFKRGSEQQSIRPQGPLRA NNGVALTRAACDDQGIILQPTFIVGEALRSGQLVSLLPEWDKGDVGLYAVYPHRRFVS AKVRCFIEFVQERYLAPQQWDAPT" misc_feature complement(1352787..1352966) /locus_tag="B565_1226" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(1352079..1352957) /locus_tag="B565_1226" /note="transcriptional activator TtdR; Provisional; Region: PRK09801" /db_xref="CDD:182085" misc_feature complement(1352118..1352702) /locus_tag="B565_1226" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature complement(order(1352181..1352183,1352262..1352264, 1352313..1352315,1352493..1352495,1352499..1352501, 1352541..1352543,1352658..1352660,1352670..1352672)) /locus_tag="B565_1226" /note="putative effector binding pocket; other site" /db_xref="CDD:176114" misc_feature complement(order(1352286..1352288,1352295..1352300, 1352319..1352333,1352412..1352414,1352595..1352615, 1352619..1352621,1352631..1352633,1352640..1352645, 1352649..1352654,1352664..1352669)) /locus_tag="B565_1226" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 1353085..1353645 /locus_tag="B565_1227" /db_xref="GeneID:10487144" CDS 1353085..1353645 /locus_tag="B565_1227" /codon_start=1 /transl_table=11 /product="Small protease" /protein_id="YP_004391879.1" /db_xref="GI:330828927" /db_xref="GeneID:10487144" /translation="MKMTKALLASCLFMATPLMAADYDVDAAHTTVQFKVGHLGFSEL VGRFNTFSGTFSMDDAKPAAAKASFEVDAASVDSNHEARDKHLRSPDFLDVKQYPKMT FVSSAYEGTKDKGVLKGTLTLHGVSKEVAFDLVKIGEGKDPWGGYRSGFNASTTIKRS DFGVSYMLPGIPDEMNINLFVEGVRK" misc_feature 1353085..1353642 /locus_tag="B565_1227" /note="YceI-like domain; Region: YceI; cl01001" /db_xref="CDD:194004" gene 1353645..1354382 /locus_tag="B565_1228" /db_xref="GeneID:10487145" CDS 1353645..1354382 /locus_tag="B565_1228" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391880.1" /db_xref="GI:330828928" /db_xref="GeneID:10487145" /translation="MGAELLLQTLAAPLGAALLSWRWPRLGYLWGALALWLVGSWLGG LYGMPEKAWQWLPLTLLVPAIAAQVNDQRGSLLLFAVFSALVWWQGLASVLASEPGIW LALLPAILWFGWSTLRCDSREGLGFALGFIWLALVIGIDGSLLIAQLAGALAAFAGFR ALLATFVGIKVAPAGLALALAFVQMLAWQYVEVPLVVLLPVWLMPLLEWALRDKPWPV RWGGLILLAAAGTGLSMWWVWPAASLY" gene 1354565..1355689 /locus_tag="B565_1229" /db_xref="GeneID:10487146" CDS 1354565..1355689 /locus_tag="B565_1229" /codon_start=1 /transl_table=11 /product="S-adenosyl-L-homocysteine hydrolase, NAD binding domain" /protein_id="YP_004391881.1" /db_xref="GI:330828929" /db_xref="GeneID:10487146" /translation="MRSQGSEHLFFRHFTGQGRIDGLCILLVTHLLPDRPRFIDALGQ IGRIGAILPKPKSVHGPTLEWVSQHYPVLPLNRRWTNEPDSLIQQIAPLVAPHERLLI LDIGGYFAKTQVILSEYFGPRFLGVVEMTENGHQRYEQEVLATPVVSVARSPLKQAED IQIGLSVVYSAESLARNLNRTFNVCEAVLFGYGKVGRSIARDLRCRNLHLGLVETDVL RQVEALSHGFRLITKAEALSRAELVICSTGNGSLDLADLQALRPGTMVASVTSADDEF AFSLAQLPWPSEEVCPHVLALNRPDGTQIYLLNRGEAVNFVHGAVIGEYVYLVLAEIM EGIRMLAAGPLAPGLFELPESAMRTIARHWLADFHGVDQH" misc_feature <1354865..1355509 /locus_tag="B565_1229" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature order(1354877..1354879,1354952..1354957,1355030..1355032, 1355042..1355044) /locus_tag="B565_1229" /note="active site" /db_xref="CDD:29522" misc_feature order(1354955..1354963,1355045..1355047,1355135..1355137, 1355141..1355149,1355201..1355209,1355300..1355305, 1355369..1355377,1355501..1355503,1355507..1355509) /locus_tag="B565_1229" /note="NAD+ binding site [chemical binding]; other site" /db_xref="CDD:29522" misc_feature order(1354967..1354972,1355018..1355020,1355024..1355026, 1355039..1355041,1355051..1355053,1355075..1355080, 1355099..1355104,1355111..1355113,1355117..1355119, 1355180..1355185,1355204..1355230,1355234..1355245, 1355252..1355257,1355306..1355317,1355345..1355353, 1355384..1355386,1355429..1355431) /locus_tag="B565_1229" /note="oligomerization interface [polypeptide binding]; other site" /db_xref="CDD:29522" gene 1355717..1356076 /locus_tag="B565_1230" /db_xref="GeneID:10487147" CDS 1355717..1356076 /locus_tag="B565_1230" /codon_start=1 /transl_table=11 /product="Selenoprotein W-like protein" /protein_id="YP_004391882.1" /db_xref="GI:330828930" /db_xref="GeneID:10487147" /translation="MAVRHFPPLAAFFMESLMTESETLISKPRIEIRYCTLCRWMLRA AWLAQELLSTFDSDLGEVALVPASKGEFRILVSGVQVWDRVVDDGFPEAKEIKQRVRD VIAPERDLGHSDRKVTE" misc_feature 1355792..1356073 /locus_tag="B565_1230" /note="Rdx family; Region: Rdx; cl01407" /db_xref="CDD:194128" gene complement(1356191..1357900) /locus_tag="B565_1231" /db_xref="GeneID:10487148" CDS complement(1356191..1357900) /locus_tag="B565_1231" /codon_start=1 /transl_table=11 /product="acyltransferase family protein" /protein_id="YP_004391883.1" /db_xref="GI:330828931" /db_xref="GeneID:10487148" /translation="MFTIDTLLTQHFPRLLGYPLLTPLFKRLLGWLLNERAFADFAAR YPHLRGLDFVEQALTQLDFDYRVSEAQLEHIPASGRVILVANHPIGSLDGLALLQLLG RIRPDVKIVANQLLAQLAPLRPLLLPVDNMEGKTDRQAILAMNEHLAHEGALVIFPAG EVSRLGLKGVKDGPWQAGFIKLAQRTRTPLVPIHLGGRNSLWFYLASWLNKPASALLL VRQLFRQQGQTLPVTIGARIPLGSFQELPAKTAARLVRNHLYRIGRGKAGRLQTEAPI ALPEDRRQLKQAIESCEQLGTTPDGQGIYLYRRHELSHSVILRELGRLREIAFRAVGE GSGKRRDLDGFDNDYHHLILWDPARLDIIGAYRFAPVAELLASKGKDGLYSHTLFGFE DKLLPRLEQAIELGRSFIQPAYWGKRGLDYLWFGIGAYLARYPRYRYLFGPVSLSGSL PPAAKDLLVSFYRQHFAPELALAPSRRPYPETQPLFEGVDYGADLKALKARLDNLGCA IPTLYKQYSELCEPGGVQFMDFGIDPDFNHCIDGLVWVDVSRIKSHKRARYIGSHLAE PRL" misc_feature complement(1357121..1357720) /locus_tag="B565_1231" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" misc_feature complement(order(1357415..1357423,1357556..1357567, 1357622..1357624,1357631..1357633,1357640..1357642)) /locus_tag="B565_1231" /note="putative acyl-acceptor binding pocket; other site" /db_xref="CDD:153244" misc_feature complement(<1356443..>1356931) /locus_tag="B565_1231" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(1358104..1359327) /locus_tag="B565_1232" /db_xref="GeneID:10487149" CDS complement(1358104..1359327) /locus_tag="B565_1232" /codon_start=1 /transl_table=11 /product="peptidase T" /protein_id="YP_004391884.1" /db_xref="GI:330828932" /db_xref="GeneID:10487149" /translation="MDTLLERFLRYVTFHTRSDETNPACPSSEGQLIFARALQEEMKA LGLTRVTLDEHGYLTGCLPGNQPDAPAIGLIAHMDTADYEAEHVVPQIIENYQGGDIC LGKGDEVLAIRDYRFLKNYLGQDLITTDGTTLLGADDKAGIAEILTTIDHLQAHPEIP RGDIWVGFTPDEEIGRGANLFPLERFPAKWAYTVDGGELGELEYENFNAASATVRFIG NNVHPGTAKGSMINSQTLAARFHAAMPAEQTPECTDGYEGFFHLAQMSGTVEESTLHY IIRDFDDEHFAARKAEMQNRVAALQAEYPKARIELTLTDSYRNMRSQIEPHMHIVELA KAAMEAADVVPKIKPIRGGTDGARLSFMGLPCPNLFTGGHNFHGKHEFIPLQSMEKSV ATLVELVRLTAAWRG" misc_feature complement(1358116..1359318) /locus_tag="B565_1232" /note="peptidase T; Region: peptidase-T; TIGR01882" /db_xref="CDD:130937" misc_feature complement(1358125..1359318) /locus_tag="B565_1232" /note="M20 Peptidase T specifically cleaves tripeptides; Region: M20_peptT; cd03892" /db_xref="CDD:193512" misc_feature complement(order(1358197..1358199,1358743..1358745, 1358809..1358814,1358914..1358916,1359097..1359099)) /locus_tag="B565_1232" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193512" misc_feature complement(order(1358197..1358199,1358275..1358277, 1358521..1358547,1358551..1358553,1358566..1358580, 1358605..1358607,1358614..1358616,1358623..1358628, 1358632..1358634,1358638..1358640,1358644..1358652, 1358656..1358664,1359082..1359084)) /locus_tag="B565_1232" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:193512" gene 1360369..1362243 /locus_tag="B565_1233" /db_xref="GeneID:10487150" CDS 1360369..1362243 /locus_tag="B565_1233" /codon_start=1 /transl_table=11 /product="Biosynthetic arginine decarboxylase" /protein_id="YP_004391885.1" /db_xref="GI:330828933" /db_xref="GeneID:10487150" /translation="MKVYNVPYWGAGFFNINDAGHVTVAPDKSRPDAHIVLSDAIEQL RQSGLTTPVLLRFPDILKSRVDALFNAFGQAIEKSGYEGDYLCVYPIKVNQQRRVIET ISQSYSDKPRLGLEAGSKPELLAVLSHHHEQGSVIVCNGYKDREYIRHALLGNLMGHK VYIVVEKPSELEMVLDESARLNIKPNIGVRAKLASTGSGMWESSGGSMSKFGLSASQI LALIERLRGLGKLDCLQLLHFHLGSQIANIRDIQGGIRECGRFYAELRRLGANIEVVD VGGGLGVDYEGTRSQSHCSANYSLSEYANNVVWGIGDVCREFDLPHPTIISESGRALT AHHAVLVTNIIGAEGVEMNDISAPDEDAPTILQNMWKGWLDLRSEDPSLLEIFHDSVA DLGDVNTQYTMGLLNLEQRAWAEMLHQNTCLALKEMLNPVNRNHRALADELSEKLADK CFANFSLFQSLPDAWGIGQVFPVMPLAGLDRPLSRRGILMDITCDSDGQVEHYVDGLG VESTLPMPVYGENEECHVGFFLVGAYQEILGDLHNLFGDTHCAEVWLDEEGKMDIRNV VRGDTVDQLLRYVNIDPSVIRENYQRIAAHPALDDATRKALLDELELGLQGYAYLEDE " misc_feature 1360369..1362240 /locus_tag="B565_1233" /note="arginine decarboxylase; Provisional; Region: PRK05354" /db_xref="CDD:180035" misc_feature 1360510..>1361421 /locus_tag="B565_1233" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Arginine Decarboxylase; Region: PLPDE_III_ADC; cd06830" /db_xref="CDD:143503" misc_feature order(1360519..1360521,1360642..1360644,1360720..1360725, 1360729..1360734,1360801..1360803,1360861..1360863, 1360873..1360875,1360885..1360887,1360993..1361004, 1361401..1361412) /locus_tag="B565_1233" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143503" misc_feature order(1360636..1360638,1360642..1360644,1360714..1360716, 1360786..1360788,1360936..1360938,1361086..1361088, 1361095..1361097,1361203..1361208,1361350..1361361) /locus_tag="B565_1233" /note="active site" /db_xref="CDD:143503" misc_feature order(1360636..1360638,1360642..1360644,1360714..1360716, 1360786..1360788,1360936..1360938,1361086..1361088, 1361095..1361097,1361203..1361208,1361350..1361361) /locus_tag="B565_1233" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143503" misc_feature 1360642..1360644 /locus_tag="B565_1233" /note="catalytic residues [active]" /db_xref="CDD:143503" misc_feature <1361701..1362027 /locus_tag="B565_1233" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes; Region: PLPDE_III; cl00261" /db_xref="CDD:193734" gene complement(1362328..1362825) /locus_tag="B565_1234" /db_xref="GeneID:10487151" CDS complement(1362328..1362825) /locus_tag="B565_1234" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391886.1" /db_xref="GI:330828934" /db_xref="GeneID:10487151" /translation="MVLLCLIPGMGQSCGYDALYPNPFEQSWPGTVNIAMATATAVSR EQLPPLAALTGEAGFSRSQAWLQTLKSRLQQAGVGGGISILLIDSGLWSRVRGKESLL LQLHTSGPNPKDRVMLLSEAAINAMLNGSLTIEQGLQLGIVELQRDDNQQLQRDLHKA LSSQT" gene complement(1362849..1364771) /locus_tag="B565_1235" /db_xref="GeneID:10487152" CDS complement(1362849..1364771) /locus_tag="B565_1235" /codon_start=1 /transl_table=11 /product="metallo-beta-lactamase superfamily protein" /protein_id="YP_004391887.1" /db_xref="GI:330828935" /db_xref="GeneID:10487152" /translation="MLSAKAAIDPKPASEFTIKANQQVLTTLPFNDKQDFEDAQRGFI AKPETLTIKDDKGNVVWDLEQYKSYIGLEKAAPETVNPSLWRNAQLNMQYGLFKVTDK IYQIRGFDLSNITFIEGNKGWVVFDPLISPQTAKAALAFINKTQGERPVTAVVYSHSH VDHYGGAAGLFNSLDEVKKNGVEIIAPEGFTEHAVSENVIAGNAMARRAVYMYGALLP RNPQGGVNGGLGQTTSTGVPSLLLPTRFITKTGETLTVDGVKMVFQMTPGTEAPAEMN TWFPDSKALWMAENTTNTMHNILTLRGAQVRDALKWASFLNETIETWGDQAEVKFQSH HWPRWGNANIVDYFKKQRDLYKYIHDQSVRLMNMGYTGEEISEQITLPPELNDFWPNR GYYGTLRHNSRAIYQRYMGWYSGNPSDLDNLPPEMVGPKYIEFMGGEQEALKKAKASF DKGEYRWVAEVLKHLVFANQNNTEGKLLLADALEQLGYQAESGPWRSVYLQGAYELRN GVPNVGGTVTASPDTIRAMSPSMLFDYLSVRINPEKAAGKKMVINMAFTDIGEKHTLS LENSVLNHTTRYAAKPDVTITLSKKTLDDIQLGQGTMEQKIANGEIKIEGDQQKFSDF VTLLDKFNFWFNIVTP" misc_feature complement(1362852..1364762) /locus_tag="B565_1235" /note="Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism]; Region: COG2015" /db_xref="CDD:32198" misc_feature complement(<1363917..1364453) /locus_tag="B565_1235" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" misc_feature complement(1362885..1363145) /locus_tag="B565_1235" /note="SCP-2 sterol transfer family; Region: SCP2; cl01225" /db_xref="CDD:194071" gene 1365083..1365271 /locus_tag="B565_1236" /db_xref="GeneID:10487153" CDS 1365083..1365271 /locus_tag="B565_1236" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391888.1" /db_xref="GI:330828936" /db_xref="GeneID:10487153" /translation="MELKRDPRCYTDVCIDGKWYHYDHCSTNVYMLMGGAAPSLQLAY EPSSEEELIEMLQQLGRF" gene complement(1365352..1365639) /locus_tag="B565_1237" /db_xref="GeneID:10487154" CDS complement(1365352..1365639) /locus_tag="B565_1237" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391889.1" /db_xref="GI:330828937" /db_xref="GeneID:10487154" /translation="MARYQFFTIPASNRQQYTFIDMASPTFLSEKAALLTQGFEVEED FIDATTPREAVEKYQSNFLYVADEIGKSDSSYAAAVAMLEIGKGLLGNKNR" gene complement(1365907..1367913) /locus_tag="B565_1238" /db_xref="GeneID:10487155" CDS complement(1365907..1367913) /locus_tag="B565_1238" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein (MCP) signaling domain-containing protein" /protein_id="YP_004391890.1" /db_xref="GI:330828938" /db_xref="GeneID:10487155" /translation="MKWIFNPAIRLGNQLSFKYKFLLWSCLMLLPLAYSMTNLLGRLQ DDNVQANRELAGVVNLAPVPAIEQALLIHRNLVTRHAYEVDPVGDDQVKAAAQAVDQS LQAFANTRQNNPSFEVIQQGWAALLSEAGKLEVEQSNLRHDKLLTEVRHLYKHITASS SLIQDPALGTYYMVILASERLPQLRDLLAQVRDRAATIADFGLFQAEGYSGLRFRLDL ISATLQELEADLTLLYQIEPAYRAELGQQTDALIQLVRQGVETMENKMMKDQLVQLST KEVQALGDKMDEAITALAGQVRQRLEADLHQRLAANQRHFWWVTAPLTASLLLYLYLM IGAYLSLRDTVGRVRDIAARVNAQDLSQHIEIVGQDELAAISRDYNVTLDTLRTLMLR VRENGVTVVESATEIEARTCRSQEVIADQQGETHQVATAIKELAATSQDMAGNALQAA RMTQEAQNVVGQGEDVVERTIKAIDHINREVLRTADTIGLLEQQCSQIGGVISVIRSI AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLANRTQGATVEIQQMIEQLQSGAR ASVTAMSAASHEAQEGVGLAQEAKQAFGAITEKVDRMVDTNAIIASAIEQQGAVVNEI ERNVVRISDGSDEALQVANAARDAARQIHQLTEQLRAMVQSFVL" misc_feature complement(1365916..1366719) /locus_tag="B565_1238" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(1365916..1366491) /locus_tag="B565_1238" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1368107..1369366) /locus_tag="B565_1239" /db_xref="GeneID:10487156" CDS complement(1368107..1369366) /locus_tag="B565_1239" /codon_start=1 /transl_table=11 /product="putative transport system permease" /protein_id="YP_004391891.1" /db_xref="GI:330828939" /db_xref="GeneID:10487156" /translation="MGTLEWKEAVRFDSTDWGWIIMSIGMAIGAGIVFLPVQVGLMGL WVFLLSAVIGYPAMYMFQRLFINTLATSPECKDYPSVITGYLGKNWGVLLGALYFVML VIWVFVYSTAITNDSASFLQSFGVTDGLLSENPLYGLVLICGLVALASRGENLLFKIS TFMVLTKISVVAVLGLMMVDKWDAANITAMPAAGDWMKDAIIMLPFTLTSILFIQSLS PMVISYRSREKSLEVARFKAMRAMNIAFGILFVVVFFYAVSFTLAMGHDQAVKASEEN ISALAMVAQGMPGQTLKLLSLTLNIFAVMTAYFGVYLGFREACQGLAMNLLRRVMPEN RINKGLVGKGIMVFTVMLSWGAIVLNAPVLSFTSICSPIFGMVGCLIPAYLVYQVPAL HKYKGTSLYIIIVTGLLLCVSPFLAFN" misc_feature complement(1368116..1369270) /locus_tag="B565_1239" /note="Amino acid permeases [Amino acid transport and metabolism]; Region: SdaC; COG0814" /db_xref="CDD:31156" misc_feature complement(1368140..1369270) /locus_tag="B565_1239" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene 1369654..1370037 /locus_tag="B565_1240" /db_xref="GeneID:10487157" CDS 1369654..1370037 /locus_tag="B565_1240" /codon_start=1 /transl_table=11 /product="endoribonuclease L-PSP" /protein_id="YP_004391892.1" /db_xref="GI:330828940" /db_xref="GeneID:10487157" /translation="MKRIITAAAAPDAIGPYSHGTAYGDLIFTSGQLPVCKQQGGVVE GGIAAQTRQSLENLKSVLEAAGGSLDTVLKTTCYLAEISDFAAFNEVYKAYFQKDCPA RSCFAVKDLPMGVKVEVEAIAHIAR" misc_feature 1369702..1370022 /locus_tag="B565_1240" /note="YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no...; Region: YjgF_YER057c_UK114_family; cd00448" /db_xref="CDD:100004" misc_feature order(1369702..1369707,1369714..1369716,1369720..1369722, 1369729..1369731,1369735..1369737,1369741..1369746, 1369864..1369866,1369870..1369875,1369879..1369881, 1369885..1369887,1369918..1369920,1369927..1369929, 1369954..1369977,1370005..1370007,1370011..1370013, 1370017..1370019) /locus_tag="B565_1240" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100004" misc_feature order(1369702..1369704,1369906..1369908,1369918..1369920, 1369960..1369962,1370005..1370007) /locus_tag="B565_1240" /note="putative active site [active]" /db_xref="CDD:100004" gene 1370060..1371349 /locus_tag="B565_1241" /db_xref="GeneID:10487158" CDS 1370060..1371349 /locus_tag="B565_1241" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391893.1" /db_xref="GI:330828941" /db_xref="GeneID:10487158" /translation="MKQAWQQYLQIIQQVVKPALGCTEPIAAAYAAAVATRQLGCEPG RLEVAVSDNLYKNSMGVYVPGTGKIGLAIAAAAGAIGGNADAGLEVLAAIQPEQVDRA QQLIDAGKVQVSRTAAPEFIFCRVTVYGTDEKGEEHSAEVTLCGGHTRIVEQRRDGEV TFTADQSQGGATGSICDGVDISIAAIYEFATQVEFEQIRFILKASELNGKLSAEGMNN PYGLEIGRTMQQNINAGLIGEDVMNRIVMMTAAASDARMGGATLPAMSNFGSGNQGIA ATIPVMVIAERFAASEEQLARALIMSHLGAIYIKSHYPPLSAFCGNTVTSAAASMAMV YLAGGSFEQSCFAIQNVLSDSAGMVCDGAKASCAMKVSTSSGAAVRGFLMALNSHSVS EQGIVAGDVDQTIRNVGQMVKEGMSATDSTIIDIMSA" misc_feature 1370105..1371343 /locus_tag="B565_1241" /note="L-cysteine desulfidase [Amino acid transport and metabolism]; Region: COG3681" /db_xref="CDD:33478" misc_feature <1370666..1371331 /locus_tag="B565_1241" /note="Serine dehydratase alpha chain; Region: SDH_alpha; cl12120" /db_xref="CDD:196345" gene 1371414..1372067 /locus_tag="B565_1242" /db_xref="GeneID:10487159" CDS 1371414..1372067 /locus_tag="B565_1242" /codon_start=1 /transl_table=11 /product="MukF protein" /protein_id="YP_004391894.1" /db_xref="GI:330828942" /db_xref="GeneID:10487159" /translation="MKLQELSPSDFEILKSMENIVDGIAAMYGQHTEVLLHSLDARNP SIVKIANGHITGRSVGAPITNLAMMKLKSGQDISSPYMTKCATGKTLRSITTVIRNGE HRAIGLLCINSDMDAPLQSVLRTMMPECMHPHESHATPEVFARNIDEALNSTIDTVSA EVRGNEAVPPSQKTRVIVNQLHDMGIFELKDSAQIAARQLGISVHSIYRYLREIKKG" misc_feature 1371423..1372064 /locus_tag="B565_1242" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG2964" /db_xref="CDD:32784" misc_feature 1371450..1371788 /locus_tag="B565_1242" /note="YheO-like PAS domain; Region: PAS_6; pfam08348" /db_xref="CDD:116929" gene 1372222..1372809 /locus_tag="B565_1243" /db_xref="GeneID:10487160" CDS 1372222..1372809 /locus_tag="B565_1243" /codon_start=1 /transl_table=11 /product="phosphoglycerate mutase family protein" /protein_id="YP_004391895.1" /db_xref="GI:330828943" /db_xref="GeneID:10487160" /translation="MSRLIYLLRHGQTRFNAEQRLQGRCNSDLTDKGEAQAIAMGRRL ADELADPARWTVYASPLGRARQTALLVCEQLGLSADRIVWDDRLMELGMGEWESCQIP VLRLAHPELDTGKGDWYLQAPGAESFESIQRRAHQWLQDPAIAERAIVISHGLLGAML RGVYADLGYEATWSQELPQDAFYKLQDGHITRIAC" misc_feature 1372234..>1372491 /locus_tag="B565_1243" /note="Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction; Region: HP_PGM_like; cd07067" /db_xref="CDD:132718" misc_feature order(1372246..1372251,1372408..1372410) /locus_tag="B565_1243" /note="catalytic core [active]" /db_xref="CDD:132718" gene complement(1373125..1373871) /locus_tag="B565_1244" /db_xref="GeneID:10487161" CDS complement(1373125..1373871) /locus_tag="B565_1244" /codon_start=1 /transl_table=11 /product="Prophage MuSo1, transcriptional regulator, Cro/CI family" /protein_id="YP_004391896.1" /db_xref="GI:330828944" /db_xref="GeneID:10487161" /translation="MSERYEEKPQAVQKDGEVSFLTAGMDTLSDRLDELRGSLSYKAF AELVGMSESGMRKYFPPFNSLPTIDKALRIARTFNVNLEWLATGQGPKHPDGAAEQMV QREEFDEEYALIDGYHVTVSTGHGAFNDDHEVKRKLAFRRKWLTFRKLNPDNLVVVFA KGDSMEPTIHSGDSILVDISKNQIEDGSIFVLRLGEELYAKRLQKNFDGGITIISDNR DDYPLQVVPANQLENLAVIGKVVWAGHDFF" misc_feature complement(1373617..1373781) /locus_tag="B565_1244" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cl09100" /db_xref="CDD:195788" misc_feature complement(1373158..1373406) /locus_tag="B565_1244" /note="Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (...; Region: S24_LexA-like; cd06529" /db_xref="CDD:119397" misc_feature complement(order(1373269..1373271,1373380..1373382)) /locus_tag="B565_1244" /note="Catalytic site [active]" /db_xref="CDD:119397" gene 1374280..1376493 /locus_tag="B565_1245" /db_xref="GeneID:10487162" CDS 1374280..1376493 /locus_tag="B565_1245" /codon_start=1 /transl_table=11 /product="integrase catalytic subunit" /protein_id="YP_004391897.1" /db_xref="GI:330828945" /db_xref="GeneID:10487162" /translation="MSTWYTAQALAGLAGMPVYPDGVRKKAEREEWQSRKREKGKGAE YHISSLPSETRRYLAEQAVAAQGQAVTDHAAGGKAMAKLLAREVPVKPEAGRKLLTLG EGARQKVDARLLILQAADIFLAPYQACQQGEVGRRAFIEAYRARSLSLPASVYDRQKP FSLITLRRWQSALADEGPAALAGNYQRERPSTVEQSPDLAQFLTALVTAKPHLANKWG ALHELASQYNEMNQLGWQIPSQSSLRRWMVKWLADNKVAFTYATNPDAYNNKYRSAIE EMYPWMAQPNDVWEFDSTPVDAMLVDGRHSIIAVIDVFTRRVRLLVAKTSSSEGICLL LRKTLLAWGTLNDNGVMRTDNGSDYVSQRVMSICTLLGMNVSRSNAYSGWEKPHIERF FRTLSHGLIELLPSYIGHCVADRQVIEARKSFAQRLEEKRKPDAEKEIFELAMTACEL QSLLDNWLDARYHNRKHGSLGMTPNEKYGHARYQRRAIGDESALDLLLNHIGEATVSK GFIKAGGLKYTAPELLEHNWKSQRVSVFLDPSDVGRAILYRTGDWNERIEAINIDLLG NGVSPDAFRAAKRADAKALAGFRREMRNVAKTFGIDQLHQDVVRHFVSQARDIAQFQR SDLTLDNPALAALSGVAVPGEPAQFSAAELAAIEARREEKAARQQATAGQESRALKTE YEQAICLAEKELDAPLTEREREWLTRYLYSHKLMAKRINRHLDDVRAIRHTQAKG" misc_feature 1374304..>1374444 /locus_tag="B565_1245" /note="Mu DNA-binding domain; Region: HTH_Tnp_Mu_1; pfam02316" /db_xref="CDD:111230" misc_feature 1375129..1375467 /locus_tag="B565_1245" /note="Integrase core domain; Region: rve; cl01316" /db_xref="CDD:194099" gene 1376536..1377258 /locus_tag="B565_1246" /db_xref="GeneID:10487163" CDS 1376536..1377258 /locus_tag="B565_1246" /codon_start=1 /transl_table=11 /product="Prophage MuSo1, DNA transposition protein" /protein_id="YP_004391898.1" /db_xref="GI:330828946" /db_xref="GeneID:10487163" /translation="MKHKIVEVKNMIKTEQLLDNLLNRSSIVPGIGLIHGPSGFGKTT AVEWLFNQDEVNGIYVRCYKADTVTSLLEQIAKEIGIPQRHNLRAQVDSIIESVRAEE LAIFVDEADYVVGNARIMETLRDIYDATEQPLILVGMEEIARRISQRKQLFNRISQWI EFKPADLEDVSLIASEMLEVDVEIDDALLDLIRKRSNGVVRTIVSALDKIEKMAMASD ARIIRLEDVDASELLHDVRRSR" misc_feature 1376623..1377246 /locus_tag="B565_1246" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" gene 1377610..1377906 /locus_tag="B565_1247" /db_xref="GeneID:10487164" CDS 1377610..1377906 /locus_tag="B565_1247" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391899.1" /db_xref="GI:330828947" /db_xref="GeneID:10487164" /translation="MKISRFFTLTDLMLTAETGQKQAWFYTDRLVKAGYVKVLFKVDS LLPVPARHGLTGRYQLVRDTGRYAPLCRDHGCWDQNQQQLYPFQREEETHGNVA" gene 1377890..1378441 /locus_tag="B565_1248" /db_xref="GeneID:10487165" CDS 1377890..1378441 /locus_tag="B565_1248" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391900.1" /db_xref="GI:330828948" /db_xref="GeneID:10487165" /translation="METWLEVLQAEVAASSLAQVAEKLGLSRTTISQVCNEKYPGDMA RVQTLVEGALMGNKVRCPILGDIPAHQCLAHQRRGPSEVGSSPMDIKLWKACRSGCPH SQLTEAQQLRRPMRLSVEQGKGAQKTARYDAEATLSRLRRQAKSDGDNASSSLRILSE LLAEELKIMAIKYNRLLDKQEGK" gene 1378498..1378746 /locus_tag="B565_1249" /db_xref="GeneID:10487166" CDS 1378498..1378746 /locus_tag="B565_1249" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391901.1" /db_xref="GI:330828949" /db_xref="GeneID:10487166" /translation="MKKHLHSNLQKPAEQLSHWLTAKGYDVRTSRVCHTPLLAVTGPL PKEMQARAVLSRECLAGVVREVALVRFGGCLLHWRQES" gene 1378709..1378945 /locus_tag="B565_1250" /db_xref="GeneID:10487167" CDS 1378709..1378945 /locus_tag="B565_1250" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391902.1" /db_xref="GI:330828950" /db_xref="GeneID:10487167" /translation="MAAACSTGAKNPETGKGDEMSKIQLEIEDEALARVVLRQLPKFL EFCSATHQEELASATTEQYSAVMCPPVPGSNKIH" gene 1378956..1379576 /locus_tag="B565_1251" /db_xref="GeneID:10487168" CDS 1378956..1379576 /locus_tag="B565_1251" /codon_start=1 /transl_table=11 /product="Gp05" /protein_id="YP_004391903.1" /db_xref="GI:330828951" /db_xref="GeneID:10487168" /translation="MQEAQTASTTPMRQNAQGHWVPESLIAPADKLRDEVVLAIIAAA REQRAQLAAFKIGAMQQIADFVDLSAEQYGVAWGGTKGNVTLLSFDGRYKLIRAVGEH RKFDERIQAAKALIDQCIARWSDGASSEIRALVDHAFRVSKSGHIDVNQVLSLRQLNI DDPDWLLAMQAAVDAIQVTGTSQYLRLYERDAHGRYIQMSLDLAKL" misc_feature 1378989..1379570 /locus_tag="B565_1251" /note="Protein of unknown function (DUF3164); Region: DUF3164; pfam11363" /db_xref="CDD:151804" gene 1379591..1379785 /locus_tag="B565_1252" /db_xref="GeneID:10487169" CDS 1379591..1379785 /locus_tag="B565_1252" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391904.1" /db_xref="GI:330828952" /db_xref="GeneID:10487169" /translation="MEINVEKAEEQLLLCEQITETEGTCYPDDTYEDGIKAALLWVLG LGPAPLNAEEYQGVTPLQFE" gene 1379908..1380165 /locus_tag="B565_1253" /db_xref="GeneID:10487170" CDS 1379908..1380165 /locus_tag="B565_1253" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391905.1" /db_xref="GI:330828953" /db_xref="GeneID:10487170" /translation="MTKTEMDIRLTKIFSSAAIALVAAEKRAVCKQLKQFDKEARARG FHALAGEACQMRWQLVAELQQAKSARDGGGVHGTGDRHGHL" gene 1380152..1380418 /locus_tag="B565_1254" /db_xref="GeneID:10487171" CDS 1380152..1380418 /locus_tag="B565_1254" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391906.1" /db_xref="GI:330828954" /db_xref="GeneID:10487171" /translation="MAIYSPLLAPHILARRLQSGRACITELGLEQRCPRCGEFWPWDT EFFGVASDATRLSSWCRGCLNEHYQQLRVAGQHHDSKAERGGDR" gene 1380418..1380867 /locus_tag="B565_1255" /db_xref="GeneID:10487172" CDS 1380418..1380867 /locus_tag="B565_1255" /codon_start=1 /transl_table=11 /product="Mu-like phage E16 protein" /protein_id="YP_004391907.1" /db_xref="GI:330828955" /db_xref="GeneID:10487172" /translation="MDKRSRLIRLVQVGRRALALEDESYRDLLASHTGKRSAALLSEQ ELEQVLAAFKAAGFIPKPARHAANRRLSPAAGSHIRVNEIAKIRAIWCEMARLGIIRD GSETALNHWVQRMTARLNGGVGVAEVGWLDAPLAVKVLEALKKWSAR" misc_feature 1380475..1380864 /locus_tag="B565_1255" /note="Protein of unknown function (DUF1018); Region: DUF1018; cl01815" /db_xref="CDD:154603" gene complement(1380919..1382283) /locus_tag="B565_1256" /db_xref="GeneID:10487173" CDS complement(1380919..1382283) /locus_tag="B565_1256" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391908.1" /db_xref="GI:330828956" /db_xref="GeneID:10487173" /translation="MSNDKGDYLTDGLRVAVHHKQMLDQLGSEHDEQRHSLDAAINSS EALLRRLGKALPVKDSSTSNSLHVITPVRTKSWEEILAEAKQAIPAEVDFNDVLTPAE IDAVLAKHQKLGEHLGWLGSLDRYDVALAVSAGILSGLIDIFLVQVPAHPGFLGSPAS EGGWLSNKVKELFGEVLPPEKIKELEGLYKVSFDPSTSKGLEEAVAGLGPRTHRYQSL GHDPILGFIFGVKDVLCGEFTAIDKFGNVIVQQTAAPLLEGEHFIIRLLEAIRKVGGH LASDVATSAGLPAPLMPLLSFFQFGTIGKQGYTIAEVARQMYRSGYDLRHFIAASVPL AISELIVRLGFMVRKLNAGATLAEAFPNAAHPQLRRQLLIAHGVAGVINAGKVTVTSN PLSISWPLVLTLLRYGMPEMMYLIYGQEKERAKLVETEIMTDYRAIHQELDTQLKMLP HIVI" gene complement(1382283..1382816) /locus_tag="B565_1257" /db_xref="GeneID:10487174" CDS complement(1382283..1382816) /locus_tag="B565_1257" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391909.1" /db_xref="GI:330828957" /db_xref="GeneID:10487174" /translation="MSKEAIYKNLESLAPVVKVLGEVDKALNDKERIDSDSDDIKEVL AAAGGVGAGAGIGFAGLYFGGVTGLSAAGITSGLAAAGGLVGGGMAAGVAVLAAPAVL LGVGAYAFVSQRNKRKLKEKKEMLLQEAMKKQNAIISELRKSSDDNKARADYLTKLNT LLQSIIIDLEGDLKVAA" gene 1383039..1383404 /locus_tag="B565_1258" /db_xref="GeneID:10487175" CDS 1383039..1383404 /locus_tag="B565_1258" /codon_start=1 /transl_table=11 /product="Mu-like phage C protein, positive regulator of late transcription" /protein_id="YP_004391910.1" /db_xref="GI:330828958" /db_xref="GeneID:10487175" /translation="MEQNQDLFADDHASLGQLVDRLDQIPASELTAKWPKALAELVDV LACELVRGGMEPDLAKAQARKLALVQAHYMGGRAYYLPTGEHLKAALRDRAIWDEFNG RNIDVLARRRFQPDLFDRQ" misc_feature 1383042..1383371 /locus_tag="B565_1258" /note="Mor transcription activator family; Region: Mor; cl02360" /db_xref="CDD:121262" gene 1383768..1384346 /locus_tag="B565_1259" /db_xref="GeneID:10487176" CDS 1383768..1384346 /locus_tag="B565_1259" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391911.1" /db_xref="GI:330828959" /db_xref="GeneID:10487176" /translation="MGKEDDAIESFSVAMERFYEPRVGINFCTYLKRIGRNTDFLQHA YLFAEQFEDPDLVQTAWESAKVMFDDAKVRTFSRKLRKYYPNEHGENIVTTSEAFIGR LQNLEAELGVKAADIHRLSEACLRIATKYRKSINSSGLGVGEGLAMVCFEVDRCEPDV VSDMNYDLAMEVAELDNLLDIPATAWFRCAAR" gene 1384864..1385439 /locus_tag="B565_1260" /db_xref="GeneID:10487177" CDS 1384864..1385439 /locus_tag="B565_1260" /codon_start=1 /transl_table=11 /product="secretion activator protein" /protein_id="YP_004391912.1" /db_xref="GI:330828960" /db_xref="GeneID:10487177" /translation="MLSLALKWLLRPDVEGGEVNHPADRGGHTKYGIADAADGKKDGM ADLDRDGVPDIAIGDLTPAHTEPFYRQNYWAPARCDLIASLSPALSIAVFDAAVHHGP KRAIQQLQQVLGVMADGRLGPVSIGRLKQQLGAKGEGPFLLALMMQRASFMHGIVRKD PSQWANADGWINRLLRLQSYLLSDVVGEVVA" misc_feature 1384906..>1385430 /locus_tag="B565_1260" /note="Lysozyme family protein [General function prediction only]; Region: zliS; COG3926" /db_xref="CDD:33711" misc_feature 1384906..1385166 /locus_tag="B565_1260" /note="Predicted lysozyme (DUF847); Region: DUF847; pfam05838" /db_xref="CDD:147798" gene 1385436..1385753 /locus_tag="B565_1261" /db_xref="GeneID:10487178" CDS 1385436..1385753 /locus_tag="B565_1261" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391913.1" /db_xref="GI:330828961" /db_xref="GeneID:10487178" /translation="MSVLTIKQQKAAAAIQAAGCFGIPELKNPRYLACFKDGRKAHLK AALANQIADPKAIPLYSHHQTRQSLFEKGWRSVTELDRLRARARHCQPPLFHPKKKEV HHA" gene 1385746..1385967 /locus_tag="B565_1262" /db_xref="GeneID:10487179" CDS 1385746..1385967 /locus_tag="B565_1262" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391914.1" /db_xref="GI:330828962" /db_xref="GeneID:10487179" /translation="MPDSLLPQAKSAFKSRTVIGGVIAVGAGIAGLFGVPVDAGTQAS LASTLVDLASAVGGLLAIWGRIKATHTVR" gene 1386135..1386362 /locus_tag="B565_1263" /db_xref="GeneID:10487180" CDS 1386135..1386362 /locus_tag="B565_1263" /codon_start=1 /transl_table=11 /product="DnaK suppressor protein" /protein_id="YP_004391915.1" /db_xref="GI:330828963" /db_xref="GeneID:10487180" /translation="MTDHIDRAQLADADRTGRIIEAHQNRARPHGDGICCDCDEAIPT SRLAAEPGAERCIECQTLYERKEATRVGFHR" misc_feature <1386135..1386335 /locus_tag="B565_1263" /note="Prokaryotic dksA/traR C4-type zinc finger; Region: zf-dskA_traR; cl00755" /db_xref="CDD:193930" gene 1386343..1386657 /locus_tag="B565_1264" /db_xref="GeneID:10487181" CDS 1386343..1386657 /locus_tag="B565_1264" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391916.1" /db_xref="GI:330828964" /db_xref="GeneID:10487181" /translation="MWDFIVKNWGPLYALASLVGLVVIILLSKTYAKREDLTALVQRV QRVEQVLADLPSERELHKLQLEISELRGELREVKPELRQARRLADLLLENELAAVQKE KP" misc_feature 1386343..1386579 /locus_tag="B565_1264" /note="Protein of unknown function (DUF2730); Region: DUF2730; pfam10805" /db_xref="CDD:151255" gene 1386654..1386950 /locus_tag="B565_1265" /db_xref="GeneID:10487182" CDS 1386654..1386950 /locus_tag="B565_1265" /codon_start=1 /transl_table=11 /product="putative prophage protein" /protein_id="YP_004391917.1" /db_xref="GI:330828965" /db_xref="GeneID:10487182" /translation="MSIQQILDAQQRLVILRSLLDIGGAANESILNDCLDQLGTGRVT RDRVKTLLAWLEEQGLVRIERLATVQVAHLTGRGQDAAEGRATVPGVKKPRAED" gene 1386953..1387528 /locus_tag="B565_1266" /db_xref="GeneID:10487183" CDS 1386953..1387528 /locus_tag="B565_1266" /codon_start=1 /transl_table=11 /product="protein gp27" /protein_id="YP_004391918.1" /db_xref="GI:330828966" /db_xref="GeneID:10487183" /translation="MADKPTRGRASKVWLLPESIRNALNEMLRDKGNSQAAILDEING LIEEAGLPDDLKLSRSGLSRHASQVEQVGQHLRDLRETTAALTSQLGDKPMGETTKLI LELGRSQLFKAMLAQVQNPEEAVDIDMLKNAMLAAQRLESTAMQSHKREKEIRQAFAE EIAAKTEAIVTQAGLSGEAAAEIRREILGIA" misc_feature 1386971..1387519 /locus_tag="B565_1266" /note="Protein of unknown function (DUF3486); Region: DUF3486; pfam11985" /db_xref="CDD:152420" gene 1387528..1389099 /locus_tag="B565_1267" /db_xref="GeneID:10487184" CDS 1387528..1389099 /locus_tag="B565_1267" /codon_start=1 /transl_table=11 /product="Mu-like prophage FluMu protein gp28" /protein_id="YP_004391919.1" /db_xref="GI:330828967" /db_xref="GeneID:10487184" /translation="MTAIAQTPIAQQLAQTLGTEYNPDEVLLPYQRIWIADESPLKIA EKSRRTGITWAEAADAALTAAKTKTAGGCHHFYVGSNKEMAREFIDAVAMWAKAYNKA AGEIQEEVFTDDEDKAILTFVVYFASGFKVQALSSNPSNLRGMQGNVTIDEAAFHDRL AEVLKAAMALTMWGAKVRLISTHNGVDNLFNQLINDSRAGRKEYSIHTISLDDACRQG LYRRICQVKGGLWTQEAEDAWKAGLLKATATEEDALEEYFCVPKQSSGVYIKRTLIER AMQPDIPILRFTAPKDFELSSEETRKAVVDIWCEENLKPCLEALDRSCRHVLGEDFAR KGDLSVFVPLSIATNLRKQVPFVVELVNAPYESQRQILFYLLIGLHRFTAAAFDATGN GGYLAEAARLRWGAGMIECVMLNDPWYREWMPKLKAEFEDGNLTIPRHADVQDDLGKI QVINGIPKIDKGRSLSKHAGQGGQQRHGDFAVALAMAVRASWMEGGAIEFTPLPNKRD EARGDNHHSFERGAW" misc_feature 1387594..1389096 /locus_tag="B565_1267" /note="Mu-like prophage FluMu protein gp28 [General function prediction only]; Region: COG4373" /db_xref="CDD:34082" gene 1389099..1390397 /locus_tag="B565_1268" /db_xref="GeneID:10487185" CDS 1389099..1390397 /locus_tag="B565_1268" /codon_start=1 /transl_table=11 /product="Mu-like phage gp29" /protein_id="YP_004391920.1" /db_xref="GI:330828968" /db_xref="GeneID:10487185" /translation="MGRIIDINGNPLRLEKDPQTENSAALAQLRRHYSEHPTVGLTPS RAAAALKEAEQGNLIAQCELAEDMEEKDAHLQSELGKRRRALLGVSWTIEPPRNAAPA EKRDAELIRELLEDFTWLDDAIFDATDGILKGFSAQEFSGWEMVEGLQIPKGIVWRDP AWFQTHPDDRNQLRLRDGSQAGVALNPFGWLLHKAKSKSGYLARTGLVRTLIWPFLFK NYSVRDLAEFLEIYGLPVRLGKYPEGATEKEKATLLQAVLSIGHNAGGIIPRGMEIEF QNAASGQADPFVVMMEWCERSMSKAILGGTLTSQADGKSSTNALGNVHNEVRQEVRDA DLRQLAATLTRDLVYPLYALNGKSYQGPRRSPRLEFDVTEPEDICRYADSLPKLAACG MRIPLDWAHKKMQIPQAEPDEPQLVAATSASKPPADKGEG" misc_feature 1389105..1390373 /locus_tag="B565_1268" /note="Mu-like prophage protein gp29 [Function unknown]; Region: COG4383" /db_xref="CDD:34090" gene 1390538..1390861 /locus_tag="B565_1269" /db_xref="GeneID:10487186" CDS 1390538..1390861 /locus_tag="B565_1269" /codon_start=1 /transl_table=11 /product="phage virion morphogenesis protein" /protein_id="YP_004391921.1" /db_xref="GI:330828969" /db_xref="GeneID:10487186" /translation="MANNESALNMVGLVEASDYLASLLARLAALEQGNGVAAVSALPE LLAAQPDPRSLYFGTPMVYGAAQQFGRPEINLPERRALGLSEGDKQSVLDMLSLYLDM SNQHN" misc_feature <1390673..1390840 /locus_tag="B565_1269" /note="Phage virion morphogenesis family; Region: Phage_tail_S; cl02089" /db_xref="CDD:154737" gene 1391226..1391576 /locus_tag="B565_1270" /db_xref="GeneID:10487187" CDS 1391226..1391576 /locus_tag="B565_1270" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="YP_004391922.1" /db_xref="GI:330828970" /db_xref="GeneID:10487187" /translation="MRFMGFDSDGMAVLRFTDVKIQSNESVFTRYGRNSVVANTNSFS TLNVNNYSAVGTTNSNTVVTQYQKPEAQIYALPPNTAEFKFNPADKKLKMDGVTIEII EVGSNSMSYRLSES" gene complement(1391759..1392127) /locus_tag="B565_1271" /db_xref="GeneID:10487188" CDS complement(1391759..1392127) /locus_tag="B565_1271" /codon_start=1 /transl_table=11 /product="HNH endonuclease" /protein_id="YP_004391923.1" /db_xref="GI:330828971" /db_xref="GeneID:10487188" /translation="MGNIAKQRHQAAVRQSFHCFYCGLPMWEASPAALMQQYRLTPAE ARLLQCTGEHLQPRGEGGSNQTTNIVAACRHCNGTRHKTPKVLSPELYQKKVRARVGK GGWFPKGITSKVKGNKTNGV" gene complement(1392369..1393157) /locus_tag="B565_1272" /db_xref="GeneID:10487189" CDS complement(1392369..1393157) /locus_tag="B565_1272" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391924.1" /db_xref="GI:330828972" /db_xref="GeneID:10487189" /translation="MNESEKCRLCKNQSKLQVSHAIGNAVFKRISRKSSGKAILLSND IHEENKYSSDSWAEHMLCRNCEALLNDNYEKYGLDVLRGKIGKYNKTEAGIMFSGLNL QKMNMYFLSILWRMACSGHPNHSNVYIEPSIKEILRQALINNSQIPTCQISVKLSRLI DKTPTGGFSLSNLKDIILAPLIREGSICFIYEGFVIEFFIPGLKRSLSSQAGVIRKRQ KYLFVPFVHFSDITELFEVMLVAYGKQIEGKTTVPMGKNQNEYQ" gene 1393293..1394513 /locus_tag="B565_1273" /db_xref="GeneID:10487190" CDS 1393293..1394513 /locus_tag="B565_1273" /codon_start=1 /transl_table=11 /product="Mu-like prophage FluMu I protein" /protein_id="YP_004391925.1" /db_xref="GI:330828973" /db_xref="GeneID:10487190" /translation="MPPHYGGMNISKTPYSAPFVAILQANPVSGERLAVLDAQLTPQG DGWYQLLPVGPFKARDGRPFDVASGHWQLDGQIAAALIARAKALGQDILIDYDHQTLK TDQNGQPAPAAGWYNSDEIAWREGQGLFIKPRWTERAAALVAAKEYRFLSAVFPYDAQ GRPLELRMTAITNDPGVVGMQALAALSALPASSLMSTQPGQLATSSHVAQQEKSMNEH LIALLGKLGIQPGADGQFTAEQGIAALAALDTLQAIAKKAPELEAALTAERTSLAALK ATVSTVQGGQIDLAKYVPVETYNALVTEVATLSAKVETTDTATLIKDARTQGKVVAAE EEYLTAYAAQKGVAALKALLEPRPAIAALAASQTTQVTLPEKKGEAVLSADDKYAADQ LGISYEEFAKAKGR" misc_feature 1393389..1394504 /locus_tag="B565_1273" /note="Mu-like prophage I protein [General function prediction only]; Region: COG4388" /db_xref="CDD:34095" misc_feature 1393437..1394498 /locus_tag="B565_1273" /note="Mu-like prophage I protein; Region: Mu-like_Pro; pfam10123" /db_xref="CDD:150761" gene 1394594..1395502 /locus_tag="B565_1274" /db_xref="GeneID:10487191" CDS 1394594..1395502 /locus_tag="B565_1274" /codon_start=1 /transl_table=11 /product="putative phage major head subunit" /protein_id="YP_004391926.1" /db_xref="GI:330828974" /db_xref="GeneID:10487191" /translation="MAIVTPALLQALFTGFKKNFEDAKGEAPAQYTKIATVIKSTTKS NTYGWLGKFPSLRKWVGDRVIESMKAHGYQIVNEDFEATVAVDRNDIEDDELGIYAPL FQEMGLAAGIHPDELCFGLLGAGFTTPCYDGQYFFDTEHPVYPKADGTGTPVLSANVV VDAGYQGEPWFLLDTSRALKPVIFQDRKSPQLIAMTKVDDEAVFTRKEFRYGVDCRDA AGFGFWQLAFANKRALTPDNLWDSFSKMREFQADGGRKLGVKATLLVVPPSLEKLATQ MLERELANSSSNELKGKLELVVADYL" misc_feature 1394618..1395499 /locus_tag="B565_1274" /note="Mu-like prophage major head subunit gpT; Region: Mu-like_gpT; cl01826" /db_xref="CDD:154610" gene 1395573..1396064 /locus_tag="B565_1275" /db_xref="GeneID:10487192" CDS 1395573..1396064 /locus_tag="B565_1275" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391927.1" /db_xref="GI:330828975" /db_xref="GeneID:10487192" /translation="MEQEMELAIRVGIFCQTGSTVRQVYFRAGLPIVPGKSEMVVSPE QCATLENDPRLVVVRLAEDASLQAGDAPSAPGDLDSTLGVLTGSGYLAGVATQNSDAT QAGKVTQLAEMKVDELRELALQMGIPEAAKLKKAELVTAIAATDMQYPVKDEQPSGQN GEQ" misc_feature 1395897..>1395998 /locus_tag="B565_1275" /note="Rho termination factor, N-terminal domain; Region: Rho_N; pfam07498" /db_xref="CDD:191758" gene 1396066..1396491 /locus_tag="B565_1276" /db_xref="GeneID:10487193" CDS 1396066..1396491 /locus_tag="B565_1276" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391928.1" /db_xref="GI:330828976" /db_xref="GeneID:10487193" /translation="MYASVNDMVLRFGEAELLRLAMTPTGELDQAAITIALQDAGALI DGYLAGRYPLPLAHIPSALVPICADIARHRLYGEQAPEQIAKRNEAALAFLKSVGKGE LALGLASDGATLESQNLAQLHSDGRVFGRSQGRDKGGFL" misc_feature 1396069..1396464 /locus_tag="B565_1276" /note="Protein of unknown function (DUF1320); Region: DUF1320; cl01818" /db_xref="CDD:194195" gene 1396488..1396934 /locus_tag="B565_1277" /db_xref="GeneID:10487194" CDS 1396488..1396934 /locus_tag="B565_1277" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391929.1" /db_xref="GI:330828977" /db_xref="GeneID:10487194" /translation="MSQPANPSGTELDYLQAGERLRELLTPLKSAGLKEVFVATDVAA IANLGQHSPAVHVVYQGERESEGTQSGRASSFDQLWLLVLVHRASPREVSAGVWLARI LQAVSGRACGDSTFRRVTPPVKPSYSGGAAYLPLAFTTRVKFKGER" gene 1396934..1397683 /locus_tag="B565_1278" /db_xref="GeneID:10487195" CDS 1396934..1397683 /locus_tag="B565_1278" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391930.1" /db_xref="GI:330828978" /db_xref="GeneID:10487195" /translation="MSETLHLEGDLFIETFTNGVSAGVIGPIDVDSLEVKPDSQKISI PSKRKGQYGQARENYHIPKPAMVTIKTTEIPPVLLAAAFMGLESPINQGAGTLTDLPV VLPAWPKWAQLGKSNIASTGLAIKEGVTALVVGTDIEVNYALGLVRAVKGSSVADGGS LTVSGTYNAVTGTRIAGNIQPEIKARLLLDGRSIVSGEAIKLTVPRASLSPKKAVDFM SDKPIEIELEGELLAVDGETAPFYVDRPVTV" gene complement(1399046..1399762) /locus_tag="B565_1279" /db_xref="GeneID:10487196" CDS complement(1399046..1399762) /locus_tag="B565_1279" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391931.1" /db_xref="GI:330828979" /db_xref="GeneID:10487196" /translation="MAPNLVQTYRKQLDTDPEGMTNEVTFQHFMIARRRLAILALTEY RMSDDSDFSCCLVVTELGVDEWLTDAIEDDSQWSEEELLASVADARTGNDTVVGRFVY NPVQLPINAEAQEQPGIQIRGAFIDPDYRSGLARQVYQYLRGKYGCVVSDDMQTLSGA LLWLIGINQLTSQCIEVYDAQRQSIRGYLDYPIKPGSFKPWCLTGLTHQQITQESSSK FDVVDYAEHDDKRHILFLLR" gene complement(1399831..1400169) /locus_tag="B565_1280" /db_xref="GeneID:10487197" CDS complement(1399831..1400169) /locus_tag="B565_1280" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391932.1" /db_xref="GI:330828980" /db_xref="GeneID:10487197" /translation="MTISMHSLLQKTEVVKEVSDNSFPRPIQIRRDITRYNQPRYIVL WHDEFETKRNDSSAESYYIEPIAELLVKNDKLRYAVKPSSHHSVNSRFDEAVKCAVNE ALTQELQLLA" gene 1400478..1401761 /locus_tag="B565_1281" /db_xref="GeneID:10487198" CDS 1400478..1401761 /locus_tag="B565_1281" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391933.1" /db_xref="GI:330828981" /db_xref="GeneID:10487198" /translation="MSDPRTLKLALELVARVVGREELQGLLTELEALGPGSAQAATAT TTLTDAQEALQQSLPESSELLAQSTPQWQGWGQQLAAVVETLLLLDSRSTQAAQRMVS EQQLMGQATRQSADGAAELAKAFAVLGLDFERANGRIGEGFQKTIGALDVLVAHTGAS SAAIEEALAAAYNSAKTTAEIDAVIARQKQLAAQGKITGDALARSMAIAADAMAKVKG GSGDTARSVAAIGDGFDEAAARAKSATDAMRSGLKWVQDEAKQTNASLASSGGGGGRG DITRTVNAGSFYYKSVDINSLRGNAEGLAGVEEELARYSQKVKDIPAYSEWSKYYGEK FQKEMEAMQARLKEELNKALAKESAKTNQAATQPPASAVAPSTPGTNTPGTRRPLSER ITIELKGAGGAAELQADEANANALISLLKQQGLRQ" gene 1401758..1402132 /locus_tag="B565_1282" /db_xref="GeneID:10487199" CDS 1401758..1402132 /locus_tag="B565_1282" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391934.1" /db_xref="GI:330828982" /db_xref="GeneID:10487199" /translation="MNVTLNSVQLPDDLVWRDEFEWAPVEQVVTPTLSGALLVEETAK PEGRPLTLSGHCSRAKVQELKVLEAQVARLMTLTLLDGVARTVMWRRPGVVATPLYEL ADPDGDHPYALTLNLTEIERGE" gene 1402137..1405754 /locus_tag="B565_1283" /db_xref="GeneID:10487200" CDS 1402137..1405754 /locus_tag="B565_1283" /codon_start=1 /transl_table=11 /product="Curculin-like (mannose-binding) lectin protein" /protein_id="YP_004391935.1" /db_xref="GI:330828983" /db_xref="GeneID:10487200" /translation="MTILSGDIVLLASQRLVDTDDGGGRITGREIISGNHNSLFPDVS DMDRAYGTVNMCKAFLAVQTDDTDTYYGANAMVLLPPSDPSVNLTLMTTKDHNDTRDN ARNTLERYQARGPKWQGVLYDTQLEGQRAIRFFQRVEARLPEVGETLVLVGNENKAGE FEQYVRVLDVTQKLTKFQIQGVPEFTRNVVTCTLADPLRYTFEGEQPTPYDVVTNPKT ALRETVVADAANYFASTRMVDDAAFGSMQVRAKTIFTQLVPAARSETPAVDLTAAGEL ASLVDSGRGLVSINTAAVIAPSRGLFLGSGAKPGTVAITIGAATITDKGGELVVAGSV VGSIDYGRGQLEFNAQCPNYGTQSKTVSFWPAARPARIADTAQIQIAAYNRGYAYTIT LHPTPAPGTTTVSFMAQGKWYDLKDNGRGELLGIDRSYGSGTINLATGSVMLTLGALP DVDTSIMFSWATPVNYTNRSGQAISIGKSAWQLPHKGITPKSVILTWGNGKRATDAAG DGKITGDITGIINYAEGIIDLEHVTLPALGQEYAAQYQYGEPVTERHIEPGRLNTPGQ VGHLSITLDGKDGGGAHNLTPGSLRVKFNALYHKFDVDDQELVIQTRDPIITLRDDGL GKLIDASGVVLGAIDYAAGTLHFMPDGSSPLPKPKYAWVTVGTRWEGNNQIAVQRWTM TGIEYHNTAYTFPDGEQGWVDVTYRNNNSAEAQNATLTAQALRIDVTPGFAEAILEGS MRFTLGGAVYVDRQGVLYRDPDPETGAGIQAGTIDYSNGLAVLADWAAGQPAQPSLQS LATSFSAQSVDAVTFRTPGAPLAPGSLYISANTASGRRIEATADGDGFFTTPDMDGKV NYQTGIVTVRFGRKVTAAGNETQPWYDAEQVGEDGKIWKPISVVADSIRFNCVVFSYL PLDADIIGLDPVRLPSDGRVPFIRKGNIVVVHSTKRGAYPMGVTAGQQFNTGRQRLAY CHVEDKNGKLLDPALYSANLDSGVVTLATPLNLTGYVEPLAVVHRIEDMSLVTDVEIS GRLVLARPLSHAYDAADTLVSSALIMGDLWARYTNLFDQKVWTNKWQDFVDGEPTTAQ YNDTDFPIVVTNRATLEERWAIIFQTSTTFVLVGEHVGQIALGDVNTDFAPINPNNGQ PYFRLDKRGWGAGWASGNVLRFNTKAANFPIWAIRTVLQSVAASESDRFELQLRGNVN R" gene 1405826..1407037 /locus_tag="B565_1284" /db_xref="GeneID:10487201" CDS 1405826..1407037 /locus_tag="B565_1284" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391936.1" /db_xref="GI:330828984" /db_xref="GeneID:10487201" /translation="MAAYPVKWFSSEMQGAPSLGDTADGALAALLKAVLVTGFGTLTI NALAFDAAKGWAVATFSGGHAYQQDSVIQVDGVSPAAYNGEHRVMQVTATQVWFELDG GNPGAAGSGAAMTMKVAPLGWTITHESGDGKIFIVRPTNVSESGNVSWRIDNSAFTGW TGSNQYGFASYLAKITMVEDVVDINTFTTIYDHRWPATQRYTAKTWDLIGDSQFFYWL PSIGNYSYQTVYCTGYIRSVRPGDRYHAVLCHYFTTAANANESNWGNRDASGAAYWGT TLTTFNTTDQRAIARPYHQLFGTTSWWLKGMFARFGVGLAVPNGPDNGFYFSTDPCMV MENGNHLRGYMPGLIVPYGDITAWHRKNFGDLPALPGKKVRFIRGLYQVNVYNADPRS LIGFDITGPWR" gene 1407281..1408228 /locus_tag="B565_1285" /db_xref="GeneID:10487202" CDS 1407281..1408228 /locus_tag="B565_1285" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391937.1" /db_xref="GI:330828985" /db_xref="GeneID:10487202" /translation="MAGAKGSNIYSTVFGLNQPFTGFNSRYIMFYHETLGFCSYQNIT SVNQPVTYRSAKTWELLSSGSHHVVMQYEAASNSTKIYIDGVLDAGMTVPLDVFMQLA NTYLAIGGYYYDGNVTGNCQLSHVAIYGRELTQEEITGRQSFVIGDPDFKLPVRITAI AANQELRSQFQPQDVAWRGTPPMCAGPVNLQQQTQYPLCKGRDYYWWRDGVQNVLQGY IESTVTISGVEVRRRVLCFTQDGELVGETYSRASDGVYRFDLLWLNKRYMLVAQDDPA FGPADYNAVAADYQAPKPYPPGGGVAPAPFPMLAPLKRK" gene 1408231..1408635 /locus_tag="B565_1286" /db_xref="GeneID:10487203" CDS 1408231..1408635 /locus_tag="B565_1286" /codon_start=1 /transl_table=11 /product="putative bacteriophage protein" /protein_id="YP_004391938.1" /db_xref="GI:330828986" /db_xref="GeneID:10487203" /translation="MLTYVDTLRTNRAQLLATAIDTGSGPSATLTVYTGTRPAPGAAI TDQLALVVLKFSHPCAKTVSGGVLTLKPLAEQMATASGAPTWGRIADRDGAFVADLDV GVPGSGADLEIPASEFFAGALIRINNATITEP" gene 1408648..1410597 /locus_tag="B565_1287" /db_xref="GeneID:10487204" CDS 1408648..1410597 /locus_tag="B565_1287" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391939.1" /db_xref="GI:330828987" /db_xref="GeneID:10487204" /translation="MARKDASLALRKARSINGQLELNQSDVVRLVGILHSTNLPPRLS ASPGLVLSSVLDGAPNRSSAMLDGSVVLDAVLASHTHGRGELVGAFVIECTMASTSRA PQPVLAGQYDQNVFRGPASAMGDVWERADSHSQALSSEWQKAGTERATSRSLWQQAAA HQQQVAELGEQMHQTFMANQQRFAEGMPVSKQNRQGYDSLAAGHVANQSLWVEAAPVS SWRLVGFTNPPRFDKAWQADQWQEGIPIGKGVAAQAWHHGKPLIEGWRDGWDEAMWPS KGKTPPPEPPKPPIRPDKRVLRLAFGRKRDTAELEFVWQGSDAAIVIPTRRVYLVSNT AKIVRVRDGLDIPATAVSIELDTDSWAWQFSAQIPRIAAAALTDEEEVSIHINGQRWD CVCDGWQSSQSFGRESATLTGRSRTAYLSPTHVLAQAVSERAAATMAQLAAAVLPVGW TLDWQAADWLVPAGFFSLDNQTPIEVVRYLVEAAGGFVLPHQRNRHLVIKPRYPTVPW QLDTAQADVAIPRAIITTLGSDFQPGHAANGIWVSGGHQGISARVVRQGTAGEQQAPT ITHPLVCDVTAARAQGVVGLAKTMPKRTQTIELPLSADTGLILPGALLTVDGWKGYNR GVRVSAALQNRAMTVRQQLSVERFV" gene 1410594..1410812 /locus_tag="B565_1288" /db_xref="GeneID:10487205" CDS 1410594..1410812 /locus_tag="B565_1288" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391940.1" /db_xref="GI:330828988" /db_xref="GeneID:10487205" /translation="MNLFKRFLELVPGADPLLVGTVTAVGTTTTTLNTLAGGVVTVRG TGVAIGKKAFYRGGELAGEAPDLPTYEE" gene 1411040..1412233 /locus_tag="B565_1289" /db_xref="GeneID:10487206" CDS 1411040..1412233 /locus_tag="B565_1289" /codon_start=1 /transl_table=11 /product="reductase" /protein_id="YP_004391941.1" /db_xref="GI:330828989" /db_xref="GeneID:10487206" /translation="MIIKPKVRGFICTTTHPVGCEANVRRQIAYTKAKGTIENGPKKV LVIGASTGYGLASRIAAAFGSGAATLGVFFEKAGTESKTGTAGWYNSAAFDKAAKEAG LYAKSVNGDAFSNECRAKVIELIKQDLGQIDLVVYSLASPVRKMPETGEVVRSALKPI GEVYTTTAIDTNKDQIITATVEPANEEEIQNTITVMGGQDWELWMAALRDAGVLADGA KSVAYSYIGTDLTWPIYWHGTLGRAKEDLDRAAAAIRGDLAAKGGTAHVAVLKSVVTQ ASSAIPVMPLYISMAFKIMKEKGIHEGCMEQVDRMMRTRLYASDMALDEQARIRMDDW ELREDVQQTCRDLWPSITSENLSELTDYTGYKQEFLRLFGFGLDEVDYDADVNPDVKF DVVEL" misc_feature 1411040..1412227 /locus_tag="B565_1289" /note="trans-2-enoyl-CoA reductase; Provisional; Region: PRK13656" /db_xref="CDD:184213" misc_feature 1411043..1411279 /locus_tag="B565_1289" /note="NAD(P)H binding domain of trans-2-enoyl-CoA reductase; Region: Eno-Rase_NADH_b; pfam12242" /db_xref="CDD:152677" misc_feature 1411283..1411990 /locus_tag="B565_1289" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 1412006..1412194 /locus_tag="B565_1289" /note="Enoyl reductase FAD binding domain; Region: Eno-Rase_FAD_bd; pfam07055" /db_xref="CDD:148584" gene 1412396..1413870 /locus_tag="B565_p003" /note="Arginine/ornithine antiporter" /pseudo /db_xref="GeneID:10487207" gene complement(1413936..1415150) /locus_tag="B565_1290" /db_xref="GeneID:10489948" CDS complement(1413936..1415150) /locus_tag="B565_1290" /codon_start=1 /transl_table=11 /product="aminotransferase YfbQ" /protein_id="YP_004391942.1" /db_xref="GI:330828990" /db_xref="GeneID:10489948" /translation="MFTIDKSHKLDDVCYDIRGPVHKEARRLEDEGHRILKLNIGNPA PFGFDAPEEIIKDVILNMPLSQGYCDSKGLFSARKAVMQYYQQKGMRKVDIDDIYIGN GASELIVMAMQALLNNGDEMLVPSPDYPLWTAAVTLSGGHAVHYRCDEGADWYPDLDD IRARITPRTRGLVLINPNNPTGAVYGSEFLLEVIEIARQHNLIIFADEIYDKILYDDI SHTSVCTLCDDVMVVTFNGLSKAYRACGFRQGWMVITGPKGRARGYIEGLEMLASMRL CANVPMQHAIQTALGGYQSINELILPGGRLRKQRDKAWELLNEIPGVSCVKPKGALYM FPRLDPKVYDIRDDQKMVFDLLQQEKLLLVQGTGFNWPAPDHFRLVFLPREEELEDAI GRLARFLKGYKQ" misc_feature complement(1413945..1415135) /locus_tag="B565_1290" /note="alanine aminotransferase; Provisional; Region: PTZ00377" /db_xref="CDD:185585" misc_feature complement(1413960..1415045) /locus_tag="B565_1290" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature complement(order(1414407..1414409,1414431..1414436, 1414440..1414442,1414521..1414523,1414614..1414616, 1414764..1414766,1414836..1414844)) /locus_tag="B565_1290" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(1414296..1414298,1414305..1414307, 1414407..1414415,1414542..1414544,1414734..1414736, 1414833..1414835)) /locus_tag="B565_1290" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(1414431..1414433) /locus_tag="B565_1290" /note="catalytic residue [active]" /db_xref="CDD:99734" gene 1415532..1415744 /locus_tag="B565_1291" /db_xref="GeneID:10487208" CDS 1415532..1415744 /locus_tag="B565_1291" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391943.1" /db_xref="GI:330828991" /db_xref="GeneID:10487208" /translation="MQAPVPGRYRHFKGGYYQVLALALHTETQEQLVIYQSEQDGQVY ARPVAMFMEWIEHQGQVVSRFAPAGD" misc_feature 1415547..1415732 /locus_tag="B565_1291" /note="Protein of unknown function (DUF1653); Region: DUF1653; cl01949" /db_xref="CDD:154670" gene 1416015..1416704 /locus_tag="B565_1292" /db_xref="GeneID:10487209" CDS 1416015..1416704 /locus_tag="B565_1292" /codon_start=1 /transl_table=11 /product="Aquaporin Z" /protein_id="YP_004391944.1" /db_xref="GI:330828992" /db_xref="GeneID:10487209" /translation="MKPVAAEFMGTFWLVLGGCGSAVLAAAFPHVGIGLLGVSLAFGL TVLTMAFAIGHISGCHLNPAVTVGLWAGGRFPASGVLPYIVAQVLGGIAAAAVLYVIA SGQAGFDLSAGFASNGYGEHSPGGYSLTAALVCEMVMTGFFLFVIMGATDSRAPAGFA PIAIGLCLTLIHLVSIPVTNTSVNPARSTGVALFVGDWAISQLWLFWVAPIVGAILGA LAYRLVATEQK" misc_feature 1416030..1416686 /locus_tag="B565_1292" /note="Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-...; Region: MIP; cd00333" /db_xref="CDD:29423" misc_feature order(1416138..1416140,1416192..1416200,1416552..1416557, 1416564..1416566,1416573..1416575) /locus_tag="B565_1292" /note="amphipathic channel; other site" /db_xref="CDD:29423" misc_feature order(1416198..1416206,1416564..1416572) /locus_tag="B565_1292" /note="Asn-Pro-Ala signature motifs; other site" /db_xref="CDD:29423" gene complement(1416797..1417546) /locus_tag="B565_1293" /db_xref="GeneID:10487210" CDS complement(1416797..1417546) /locus_tag="B565_1293" /codon_start=1 /transl_table=11 /product="transglycosylase SLT domain-containing protein" /protein_id="YP_004391945.1" /db_xref="GI:330828993" /db_xref="GeneID:10487210" /translation="MKAWMLAGHMLLIPLSGWSQTPPPAEVIFLTAAPSPLRPVKDST PVQQPDTAQTTAVATNGKKQIQVYKSVQQNGVVRYSDMAPEQGHYELLLFNDCFACDP KSSVNWQTTGLFLYDYASTIKAAAKTYQVEPALIRALIHAESAFNPLAVSRKGAMGLT QLMPATARELGVGNALLAEQNIFGGVKYLAGLLKQYDGNVALATAAYNAGAGAVQKHG GIPPYAETRAYVERVQLLHLRYKEMLQAKGL" misc_feature complement(1416845..1417150) /locus_tag="B565_1293" /note="Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain. Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic 'goose-type' lysozymes (GEWL). LTs catalyze...; Region: LT_GEWL; cd00254" /db_xref="CDD:29556" misc_feature complement(order(1416926..1416928,1416983..1416985, 1417058..1417060,1417118..1417120)) /locus_tag="B565_1293" /note="N-acetyl-D-glucosamine binding site [chemical binding]; other site" /db_xref="CDD:29556" misc_feature complement(1417118..1417120) /locus_tag="B565_1293" /note="catalytic residue [active]" /db_xref="CDD:29556" gene 1417857..1418315 /locus_tag="B565_1294" /db_xref="GeneID:10487211" CDS 1417857..1418315 /locus_tag="B565_1294" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004391946.1" /db_xref="GI:330828994" /db_xref="GeneID:10487211" /translation="MTSKLAMELTFEEYCDADLSLIRDYYETTFSHYVPDLAERIFVV RDAHWLVGAVRLRDEEEFYHLCGFRLLPHYQSLGLGSRLLQHACHGLLDKPVVCQALP FEKPFYLKAGFADMPLNQLSGSLFSLYERQQQQGYQVELLVRDTTQPLLN" misc_feature 1418004..1418195 /locus_tag="B565_1294" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(1418321..1418863) /locus_tag="B565_1295" /db_xref="GeneID:10487212" CDS complement(1418321..1418863) /locus_tag="B565_1295" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="YP_004391947.1" /db_xref="GI:330828995" /db_xref="GeneID:10487212" /translation="MILQSMLLSLAMLGQGSYDINEQQINQYLQSQVQVDKQLELPGI IKAHVTLEQSDVQIGRQRPDTARVYGKGKLKIALPDNTEYDARLQMTYEARPRYDKSQ SALFLDNMKLVEYKLEPEAAEKKFGLMLNMLLQSMEKRLETKPVYKLNDKDPDQAWLK ENLLGLELSPGKIHLLTKPR" misc_feature complement(1418348..1418806) /locus_tag="B565_1295" /note="Protein of unknown function (DUF1439); Region: DUF1439; cl06345" /db_xref="CDD:195292" gene 1418961..1420442 /locus_tag="B565_1296" /db_xref="GeneID:10487213" CDS 1418961..1420442 /locus_tag="B565_1296" /codon_start=1 /transl_table=11 /product="Cardiolipin synthetase" /protein_id="YP_004391948.1" /db_xref="GI:330828996" /db_xref="GeneID:10487213" /translation="MFNGLEHDLQLLFSRFLGWLLLLFHTVIVTGVSFRVVMKRRPIG VSLAWLALIYAIPFAGVGFYVLFGEIKLGRRRAERAQAMYRPYAIWIRQLARLFPQHC CEVGAKAQPLHDLIQGRLAMPMLSGNRMTLLNKPDWILREIAQDIRRSTLSCYLEFYI WHPGGDADEVCEALIEVAQRGVDCRLLLDSVGSKQFFRSHWPKKLRKAGVKLVEVLPV GAWRILFQRQDLRMHRKLVVIDDRVGYTGSMNMVDPRFFKQDAGVGQWVDIMIRVQGP MVPLMWSIFVWDWEMETGERLLDSLQHEPEAWPQTNYRAQLIPSGPFVGGDCIQQSLL LAIYQARSHLVLTTPYFVPDDPLAAALSSAAARGVQVQLVLPARNDSIMANYACNAFM EELLAAGVEIYRFDAGLLHTKSVLVDDDFALVGTVNLDRRSLWLNFEVTLLVDNPSFV AQMTRLVQGYMAEATPMTLAQWQARPWYKKAMENIFYLFSPLL" misc_feature 1419033..1420439 /locus_tag="B565_1296" /note="cardiolipin synthetase; Reviewed; Region: cls; PRK01642" /db_xref="CDD:179315" misc_feature 1419339..1419830 /locus_tag="B565_1296" /note="Catalytic domain, repeat 1, of Escherichia coli cardiolipin synthase and similar proteins; Region: PLDc_EcCLS_like_1; cd09152" /db_xref="CDD:197250" misc_feature order(1419657..1419659,1419663..1419665,1419702..1419704, 1419708..1419710,1419762..1419764) /locus_tag="B565_1296" /note="putative active site [active]" /db_xref="CDD:197250" misc_feature 1419657..1419659 /locus_tag="B565_1296" /note="catalytic site [active]" /db_xref="CDD:197250" misc_feature 1419912..1420433 /locus_tag="B565_1296" /note="Catalytic domain, repeat 2, of Escherichia coli cardiolipin synthase and similar proteins; Region: PLDc_EcCLS_like_2; cd09158" /db_xref="CDD:197255" misc_feature order(1420191..1420193,1420197..1420199,1420236..1420238, 1420242..1420244,1420275..1420277) /locus_tag="B565_1296" /note="putative active site [active]" /db_xref="CDD:197255" misc_feature 1420191..1420193 /locus_tag="B565_1296" /note="catalytic site [active]" /db_xref="CDD:197255" gene 1420550..1421812 /locus_tag="B565_1297" /db_xref="GeneID:10487214" CDS 1420550..1421812 /locus_tag="B565_1297" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391949.1" /db_xref="GI:330828997" /db_xref="GeneID:10487214" /translation="MKKIVALAVGAALVGGGLAACWYTGNSFDNIMAEQIAKVEKESG LDMQWQPGSSNLFTRDGVLKVVVTPEELAAIDSELEGSQPIELQLVVKSQILPLYIKS HFLLDTHNGTLAPVFTALGMEQWELGLESVTSLWTQGNSSRFWANEFKIKQGLDEFSF LPLSGEFHGNLEGNGHLTMTWQGMTVHEEQSKMDLVLADLKGSADIAEISGVLLSPQS EMTLSALTVQLPDSVKVALQGMTTETQLTGDDAQTLSSSYQMKIAKLDLENETDTLAV TDSKLALNLNGLDLEGYQGLQAAGGKGVEDAAIQQALDKMLKRGATLELADLSAKLNG EVVTMKGDVKLASTSLEQLFNSDAGMQALSGVLHASLSDKLGKAVPQLAPMLDQLTLM GYLKADKQALTSELKLEKGAVTVNDLPL" misc_feature 1420550..1421809 /locus_tag="B565_1297" /note="Bacterial protein of unknown function (DUF945); Region: DUF945; pfam06097" /db_xref="CDD:191449" gene complement(1421892..1422728) /locus_tag="B565_1298" /db_xref="GeneID:10487215" CDS complement(1421892..1422728) /locus_tag="B565_1298" /codon_start=1 /transl_table=11 /product="formyltetrahydrofolate deformylase" /protein_id="YP_004391950.1" /db_xref="GI:330828998" /db_xref="GeneID:10487215" /translation="MEKKILLTDCPDAKGLIAKITNICYKHQLNIIKNDEFVDHENGR FFMRTELEGRFNDETLLADLDDALPIGAQRRLVKAGKKRIVILVTKETHCLGDILMKN YAGALDMDIVAVIGNYDTLAELTGKFDIPFHTVSHEDLSRTEHEEQVRTIIDSYEPDY VILAKYMRVLTPSFVEAYPRKILNIHHSFLPAFIGARPYRQAFDRGVKLIGATAHFVT DDLDEGPIVEQDVIHVGHAFSADDMAKAGRDVEKSVLSRALELVLNERVFVYGNKTVV FK" misc_feature complement(1421895..1422728) /locus_tag="B565_1298" /note="formyltetrahydrofolate deformylase; Reviewed; Region: purU; PRK06027" /db_xref="CDD:180354" misc_feature complement(1422510..1422716) /locus_tag="B565_1298" /note="N-terminal ACT domain of formyltetrahydrofolate deformylase (F4HF-DF; formyltetrahydrofolate hydrolase); Region: ACT_F4HF-DF; cd04875" /db_xref="CDD:153147" misc_feature complement(1421898..1422485) /locus_tag="B565_1298" /note="Formyltetrahydrofolate deformylase (Formyl-FH4 hydrolase), C-terminal hydrolase domain; Region: FMT_core_Formyl-FH4-Hydrolase_C; cd08648" /db_xref="CDD:187717" misc_feature complement(order(1422063..1422068,1422075..1422080, 1422084..1422086,1422144..1422146,1422168..1422179, 1422204..1422206,1422219..1422242,1422447..1422452, 1422465..1422467)) /locus_tag="B565_1298" /note="putative active site [active]" /db_xref="CDD:187717" misc_feature complement(order(1421976..1421978,1422168..1422170, 1422174..1422176,1422234..1422239,1422447..1422452)) /locus_tag="B565_1298" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:187717" misc_feature complement(order(1422063..1422068,1422075..1422080, 1422177..1422179,1422204..1422206,1422219..1422227, 1422231..1422233,1422240..1422242)) /locus_tag="B565_1298" /note="putative cosubstrate binding site; other site" /db_xref="CDD:187717" misc_feature complement(order(1422063..1422065,1422171..1422173, 1422177..1422179)) /locus_tag="B565_1298" /note="catalytic site [active]" /db_xref="CDD:187717" gene 1423249..1423902 /locus_tag="B565_1299" /db_xref="GeneID:10487216" CDS 1423249..1423902 /locus_tag="B565_1299" /codon_start=1 /transl_table=11 /product="3,4-dihydroxy-2-butanone 4-phosphate synthase" /protein_id="YP_004391951.1" /db_xref="GI:330828999" /db_xref="GeneID:10487216" /translation="MNQSLLSEFGDPVARVEAALSALRAGGGVLVADDEDRENEGDLI FAAESMTNEQMALMIRECSGIVCLCLPDERVRQLELPMMVEANSSHYQTAFTVTIEAA QGVTTGVSAADRITTIRAAIADGAKPGDLHRPGHVFPLRARTGGVLTRRGHTEATVDL MLLAGLKPFGVLCELTKEDGSMARLPDLVAFGRKHQMPVLTIEDLVQYRQLLSERTA" misc_feature 1423249..1423893 /locus_tag="B565_1299" /note="3,4-dihydroxy-2-butanone 4-phosphate synthase; Region: DHBP_synthase; cl00336" /db_xref="CDD:185917" gene 1424128..1424370 /locus_tag="B565_1300" /db_xref="GeneID:10487217" CDS 1424128..1424370 /locus_tag="B565_1300" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein" /protein_id="YP_004391952.1" /db_xref="GI:330829000" /db_xref="GeneID:10487217" /translation="MKKLLLVGVVGLSALLGGCANTSELETSVQNLSNKVDQLAQDVS AVRADQSKIAADVAEAKQEAMRANQRIDNMATSYKK" misc_feature <1424185..1424367 /locus_tag="B565_1300" /note="Murein lipoprotein [Cell envelope biogenesis, outer membrane]; Region: COG4238; cl11539" /db_xref="CDD:187093" gene complement(1424527..1425375) /locus_tag="B565_1301" /db_xref="GeneID:10487218" CDS complement(1424527..1425375) /locus_tag="B565_1301" /codon_start=1 /transl_table=11 /product="thioredoxin-like protein" /protein_id="YP_004391953.1" /db_xref="GI:330829001" /db_xref="GeneID:10487218" /translation="MIVDITPQNFHAELIDASMKKPVVIYFHAPQMPECQGMTPLIES LVGPANEQVTLAKVDMNDPQLQPLASQLGLRALPALVLFHQGRPDEQGIIEGPQDEAT LRQYFAAFAPKEEEELLAKGQQALADEQPSIAYAHLTKAHQLAPERHDISLWLIQAAL DLNLLDEAQERLGTIPMAAQDGHFHTLSSRLALALQAADSPELRALEARHAEQPDDFA LAQELAVQYNQAGRQEEALGLLLEILKRDLAFGDARKTYLDILATMGSTPAAQSYRRK LYSLLY" misc_feature complement(1424530..1425372) /locus_tag="B565_1301" /note="Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]; Region: COG3118" /db_xref="CDD:32932" misc_feature complement(1425052..1425354) /locus_tag="B565_1301" /note="Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; Region: Thioredoxin_like; cl00388" /db_xref="CDD:193797" gene complement(1425372..1426094) /locus_tag="B565_1302" /db_xref="GeneID:10487219" CDS complement(1425372..1426094) /locus_tag="B565_1302" /codon_start=1 /transl_table=11 /product="4'-phosphopantetheinyltransferase family protein" /protein_id="YP_004391954.1" /db_xref="GI:330829002" /db_xref="GeneID:10487219" /translation="MIEIDLFLLKPAKVCQELLSQLPEWLSTDELHIWQAMTHPERHQ EYLVSRALLRQLLAERLQQPVASLQFCNGPHGKPRLHDDAWQFNLSHSGSWLVLALCP HGPLGVDIELGKRRHHPLPLARRFYAQSEYEWLCALPAQEQESAFYRLWSRKEAVLKA HGGGIAAGLEKVRFLPEEGWRLDNRLDDTPYQVQDWPFASGWLSLAAAATPVAFYRLD ERLNCHSLNPMLLNTLSEESNS" misc_feature complement(1425462..1426049) /locus_tag="B565_1302" /note="Phosphopantetheinyl transferase [Coenzyme metabolism]; Region: Sfp; COG2091" /db_xref="CDD:32274" misc_feature complement(1425609..1425779) /locus_tag="B565_1302" /note="4'-phosphopantetheinyl transferase superfamily; Region: ACPS; cl00500" /db_xref="CDD:193842" gene 1426370..1426858 /locus_tag="B565_1303" /db_xref="GeneID:10487220" CDS 1426370..1426858 /locus_tag="B565_1303" /codon_start=1 /transl_table=11 /product="lipoprotein NlpC" /protein_id="YP_004391955.1" /db_xref="GI:330829003" /db_xref="GeneID:10487220" /translation="MLLLVALGMVGCASAPQPEVASKIEVSMVEPVIEPEASQTPDVN EILTVYKEWRGVPYRMGGSSQRGIDCSAFAREVFRNAVGIELPRDTRSQVHEGTRVSK QDLVEGDLVFFKINRRLNHVGIYVGNGEFIHASTRAGVTRSKLDSQYWRNKFWQARRI DI" misc_feature 1426532..1426846 /locus_tag="B565_1303" /note="NlpC/P60 family; Region: NLPC_P60; cl11438" /db_xref="CDD:196233" gene 1427007..1427978 /locus_tag="B565_1304" /db_xref="GeneID:10487221" CDS 1427007..1427978 /locus_tag="B565_1304" /codon_start=1 /transl_table=11 /product="ribosomal RNA large subunit methyltransferase F" /protein_id="YP_004391956.1" /db_xref="GI:330829004" /db_xref="GeneID:10487221" /translation="MKPRIPSAGGPKSGDRKSGLHSRNRHQAGYDFEALCLRTPELAA HVFINDYGTRTIDFADPDAVKTLNRALLAHHYGIAHWDLPAGYLCPPIPGRVDYLHWA ADLLAESAGQLPTGKGVRVLDIGVGANCIYPLLGCREYGWRFVGSDIDPVSVKAATLL AKSNGLGNQIECRLQGNPNHVFRGIIGPKERFALTLCNPPFHASLEEASKGTERKLRN LGKEVTGAPVLNFGGQKAELWCEGGEAAFLANMIAQSKEFATQCLWFSSLVSKKENLP GAKKALSRVGARQVRVIDMAQGNKVSRILAWSFLDEEGLRRGWSSAR" misc_feature 1427037..1427975 /locus_tag="B565_1304" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" misc_feature 1427157..1427939 /locus_tag="B565_1304" /note="Protein of unknown function (DUF890); Region: Methyltransf_10; pfam05971" /db_xref="CDD:147885" gene 1428224..1428949 /locus_tag="B565_1305" /db_xref="GeneID:10487222" CDS 1428224..1428949 /locus_tag="B565_1305" /codon_start=1 /transl_table=11 /product="Nodulation protein N" /protein_id="YP_004391957.1" /db_xref="GI:330829005" /db_xref="GeneID:10487222" /translation="MKVVDFLKRKREILAQHPFELKDWLSPAIRDYWREFQQKAHLHP LLGRVLDLQAESQSEQQQDAATVAQVANGQPAVAQEPAVELAAEATELYAALQARIGE ETHVGEWLHVSQQMIDQFAAVTGDHQWIHTDPERAAAESPFKTTIAHGFLTLALLPQL TGSVDEATPEFPTARMVVNFGLDQVRFPYPIKVDSNIRARTKLARVTPIKGGLELLKE IKVEIEGIRRPGCVIESVTRIYF" misc_feature 1428521..1428946 /locus_tag="B565_1305" /note="NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their...; Region: NodN; cd03450" /db_xref="CDD:48045" misc_feature order(1428584..1428586,1428599..1428601,1428605..1428607, 1428614..1428616,1428662..1428664,1428671..1428676) /locus_tag="B565_1305" /note="putative active site [active]" /db_xref="CDD:48045" misc_feature order(1428599..1428601,1428605..1428607,1428614..1428616, 1428671..1428673) /locus_tag="B565_1305" /note="putative catalytic site [active]" /db_xref="CDD:48045" gene 1429195..1430610 /locus_tag="B565_1306" /db_xref="GeneID:10487223" CDS 1429195..1430610 /locus_tag="B565_1306" /codon_start=1 /transl_table=11 /product="sodium-dependent transporter" /protein_id="YP_004391958.1" /db_xref="GI:330829006" /db_xref="GeneID:10487223" /translation="MPINNKIILPLLLSLTILLIPTHWIPLEGITVIEQRVVAIFVLA ALCWILEPIPIFATSVLIIVLELLLLSDKGLWFMTADKAEPGFGELLKSTEVMATFAS PVIMLFLGGFFLAIAATKYHLDVNLARVLLRPFGQDPRIVMLGLMLITATFSMFMSNT ATTAMMLAILTPVLAAFPDKDPAKIGFVLAIPLAANLGGIGTPIGTPPNAVALKYLTG EHAISFGQWMGFAVPFVVLLLLLGWFLLGRFFPSTLKRMDLKIEGRFMQTPRAWVVYL TFITTIVLWLLGDLHGMSSYVVAMIPVAVFLTTGIITKDDLHKISLDVLWLVSGGIAL GLALEDSGLAERLITHIPFHEYSTLAVLVGACLLAVVMANFMSNTATANLLLPLVAAL AVSMPELAEWGGSHTLILAVTISVSLGMSLPISTPPNALAHATGLVESHQMVRIGVIM GLVGTLLAMVWIYQIAAWGLI" misc_feature 1429300..1430607 /locus_tag="B565_1306" /note="Di- and tricarboxylate transporters [Inorganic ion transport and metabolism]; Region: CitT; COG0471" /db_xref="CDD:30819" misc_feature 1429309..1430589 /locus_tag="B565_1306" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature order(1429327..1429338,1429357..1429371,1429426..1429452, 1429498..1429551,1429621..1429671,1429675..1429728, 1429747..1429818,1429876..1429920,1430014..1430052, 1430074..1430088,1430089..1430109,1430152..1430208, 1430275..1430322,1430374..1430385,1430401..1430448, 1430536..1430574) /locus_tag="B565_1306" /note="transmembrane helices; other site" /db_xref="CDD:29728" gene complement(1430681..1431604) /locus_tag="B565_1307" /db_xref="GeneID:10487224" CDS complement(1430681..1431604) /locus_tag="B565_1307" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391959.1" /db_xref="GI:330829007" /db_xref="GeneID:10487224" /translation="MNNGDRLTGNIEEVTEQSVRIALPYAGAVTVKRDAIKRWRLDKQ DKPKATAKGGFTLFKDEQDERKAWLWTGSGDLNVKLKQNDKQTNNVNLKWKSELANLD WRYSFSGEYTYETADNVTDSHDYQLNPTLDYFFNQQWFLRTSLDAEYDMLDKDRYLYM DYGSGPGYRFWNDKRRRLELMAQGGLSRLYFREDSEVPKIFLGERVIDYPFAGFNWDY RQPFSLWQEKMELFSQGRYLKYLAQASPYFTRNQDLKGSIGLRYYFNDHLRLSWSSEL DWEDADILVDTGSPEPRESEFRHLLSLGASF" misc_feature complement(1430684..1431340) /locus_tag="B565_1307" /note="Protein of unknown function, DUF481; Region: DUF481; cl01213" /db_xref="CDD:154268" gene complement(1431710..1432666) /locus_tag="B565_1308" /db_xref="GeneID:10487225" CDS complement(1431710..1432666) /locus_tag="B565_1308" /codon_start=1 /transl_table=11 /product="LysM domain-containing protein" /protein_id="YP_004391960.1" /db_xref="GI:330829008" /db_xref="GeneID:10487225" /translation="MRLPKLKPLPLTPALSLLLTAILLCAAPAEAKRYPLPAAGSRLI GELEDYIIQQNEHLELVGKNTQIGFLALLEANPGVDPYLPKPGTRLTLPTQMLLPDVP REGIVINLPELRLYYFPKGKSEVIVLPIGIGDIGRETPEMTTTVIEKNPNPTWVPGPM VRKSWLEQKGITLPAVVPPGPENPLGKFAMRLGYGKRDYLIHGTNKEFGVGLRVSAGC IRLRPDDIEALFKIVPIGTPVRVINQPVKVAIEPDGRRWLEVHSPLSRTEEELENGAP LMLSPAIESFISAPDVMQDEVTAALESKNGLPRPISSQLVSG" misc_feature complement(1431713..1432576) /locus_tag="B565_1308" /note="L,D-transpeptidase; Provisional; Region: PRK10190" /db_xref="CDD:182294" misc_feature complement(1431944..1432351) /locus_tag="B565_1308" /note="L,D-transpeptidase catalytic domain; Region: YkuD; pfam03734" /db_xref="CDD:190732" gene 1433058..1433147 /locus_tag="B565_t040" /db_xref="GeneID:10487226" tRNA 1433058..1433147 /locus_tag="B565_t040" /product="tRNA-Ser" /db_xref="GeneID:10487226" gene complement(1433234..1436368) /locus_tag="B565_1309" /db_xref="GeneID:10490025" CDS complement(1433234..1436368) /locus_tag="B565_1309" /codon_start=1 /transl_table=11 /product="putative transporter AmrB" /protein_id="YP_004391961.1" /db_xref="GI:330829009" /db_xref="GeneID:10490025" /translation="MPQFFIHRPVFAWVLALFIVLAGVIAIPKLPISRYPSVAPVSVT LYATYPGATPQTLNDAVVSLIERELSGVKNLLYFESSVDASGSAQITATFKPGTDPEL AQIDVQNRIKAVELRLPQAVRQTGLQVESASSGFLMMVGMTSPDGRFDEVALNDYMAR NIVQELRRIDGVGRVQLFGAEQAMRIWVDPAKLAAYGLTISEVAQAIEQQNIQIAPGR LGDEPALPGQRLTVPLTVQGQLTTPEAFAAIVLRAGGDGAKLVLGDVARVELGAQSYA FSNRENGVAATSAAIQLSPGANAVRTADAVRTRLAQLAPTLPAGMAYSIPFDSAPFVK VSIEKVIHTLLEAMVLVFLVMFLFLQNLRYTLIPAIVAPIALLGTFAVMLLAGFSINS LTMFGMVLAIGIIVDDAIVVVENVERLMATRGLSPREATSQAMKEITGAVIGITLVLT AVFLPMAFGSGSVGVIYQQFTLSMAVSILISAFLALTLTPALCATLLRPVSPDHHEKR GFFGAFNRGFERFTAGYGARVTRLVGRSGRMMATFAALCAVLAIAAAQLPSSFLPDED QGYFMTSIQLPTGATSERTLEVVKAFEAHVASREALDTNLVVQGFSFSGAGPNAAMAF TMLKDWDQRHGATAAEEADLAQAAMANIPEGTVMSLLPPAIDELGTASGFTLFLQDRA NRGEAALLAAQAQLLELAAKSRVVSDVYPDNLPPGESIHLEINRQKAEAMGLSFASIS STLSAAMGSLYVNDFPNGGHMQQVILQADASARMQLDDVLGLRVRNANGGMVPLREVV TPEWRESPQQMMRFDGFPAVRIAGGAAPGISSGAAMAEMERLAAQLPPGFALAWTGQS LQERQSAEQAPLLMLLSALVVFLVLAALYESWSIPLSMMLVVPLGLLGAVAAVMLRGM PNDVFFKVGMITIIGLSAKNAILIVEFARQLHSEGRSLLDAAVTAARLRLRPILMTSL AFTLGVVPLMLASGASAETQHAIGTGVFGGMISGTLLAIFFVPVFFVFIIGAQQRLHS WQARRASNRIHPGR" misc_feature complement(1433339..1436368) /locus_tag="B565_1309" /note="The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Region: 2A0602; TIGR00915" /db_xref="CDD:162104" gene complement(1436384..1437541) /locus_tag="B565_1310" /db_xref="GeneID:10487227" CDS complement(1436384..1437541) /locus_tag="B565_1310" /codon_start=1 /transl_table=11 /product="RND family efflux transporter MFP subunit" /protein_id="YP_004391962.1" /db_xref="GI:330829010" /db_xref="GeneID:10487227" /translation="MMFVKQRYAGALLAVIAAFGLAGCDVAPQEQEAPALPQVSVLTL TGRELVISEDLPARVAALRSADIRAQISGIVQRRLFEQGAEISAGTVLFQINPAPFKA DVDSAAAALQRAEAVLARARIQIERLQPLLRTDAISRQTYDDAVSLRDQAAADVAQAR ATLARHQLNLQFASVEAPIAGRIDQALVSEGALVSPTDATPMARIQQIDQVYVDVRQP ASVLESLRQQAGSTAPELAVEILGSNGTPLGMQGRILFSGIEVDAGTGDVLLRVLVDN PERRLLPGLYVQARIPRARYDNALTVPQQAVVRTSGQTSVWVVDGQGQAQLVPVNTAE LVNSQYRIASGLSAGQQVVIEGIDRLTPGVQVIASPWQPPAVSQPADSGIR" misc_feature complement(1436402..1437523) /locus_tag="B565_1310" /note="periplasmic multidrug efflux lipoprotein precursor; Reviewed; Region: PRK09578" /db_xref="CDD:169982" gene 1437699..1438427 /locus_tag="B565_1311" /db_xref="GeneID:10487228" CDS 1437699..1438427 /locus_tag="B565_1311" /codon_start=1 /transl_table=11 /product="winged helix family two component transcriptional regulator" /protein_id="YP_004391963.1" /db_xref="GI:330829011" /db_xref="GeneID:10487228" /translation="MSHLNASASPAGQSLVLIAEDEAEIADILAAYLQRHGLRSLHAA DGREALAMHQAFKPDLLLLDVQMPQLDGWQVLSEIRARGDTPVIMLTALDQDLDKLMG LRMGADDYVVKPFNPAEVVARVQAVLRRTQAVKPATANVLRVGQFQIDLESHEASIFR DDQQQVLELTLTEFKLLASLMRAPKRVFSRAELLTHCLPEGDTQERTVDSHISKLRKK LETHGIQGVPASVWGVGYRFGGDA" misc_feature 1437792..1438424 /locus_tag="B565_1311" /note="Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]; Region: OmpR; COG0745" /db_xref="CDD:31088" misc_feature 1437792..1438082 /locus_tag="B565_1311" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(1437888..1437890,1437912..1437914,1437969..1437971, 1438026..1438028,1438035..1438040) /locus_tag="B565_1311" /note="active site" /db_xref="CDD:29071" misc_feature 1437888..1437890 /locus_tag="B565_1311" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(1437897..1437902,1437906..1437914) /locus_tag="B565_1311" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 1438035..1438043 /locus_tag="B565_1311" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 1438122..1438412 /locus_tag="B565_1311" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cd00383" /db_xref="CDD:29475" misc_feature order(1438206..1438208,1438263..1438268,1438317..1438319, 1438326..1438328,1438350..1438355,1438386..1438388, 1438401..1438403) /locus_tag="B565_1311" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29475" gene 1438424..1439509 /locus_tag="B565_1312" /db_xref="GeneID:10487229" CDS 1438424..1439509 /locus_tag="B565_1312" /codon_start=1 /transl_table=11 /product="periplasmic sensor signal transduction histidine kinase" /protein_id="YP_004391964.1" /db_xref="GI:330829012" /db_xref="GeneID:10487229" /translation="MKSAPGLRRQIIRSLGLMTLGIISLAVIGTYVFYGIAVAFVPGS ISETWVPSRVEMIWIGSTILIALGMALYVAVRLSRRILTPLNSVATSLREVAEGKLDA RVPEDEQAIGETAQLVRDFNAMAERLQSMTREREFWNAAIAHELRTPVTILRGRLQGL AEGVFPPSSELFEGLLRQVEGLNHLIEDLRVLSLNDSGHLELQRTEVRLADELAVVLE AFASPLAASGFVLQRELDSELHVCCDLFRIRQALMALLENAQKHALPGLLTVRLYRLE SVCVLSVEDEGPGISEEVAACIFDAFRRGEPSRSRKSGGSGLGLAVVKAIAEAHGGSA VCQSTGRGGSRFVLSWPISAMSGGPET" misc_feature 1438487..1439491 /locus_tag="B565_1312" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:30987" misc_feature 1438598..1438813 /locus_tag="B565_1312" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 1438841..1439002 /locus_tag="B565_1312" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature order(1438847..1438849,1438859..1438861,1438868..1438870, 1438880..1438882,1438889..1438891,1438934..1438936, 1438946..1438948,1438955..1438957,1438967..1438969, 1438976..1438978,1438988..1438990) /locus_tag="B565_1312" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature 1438853..1438855 /locus_tag="B565_1312" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature 1439165..1439473 /locus_tag="B565_1312" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(1439183..1439185,1439195..1439197,1439204..1439206, 1439270..1439272,1439276..1439278,1439282..1439284, 1439288..1439293,1439366..1439368,1439375..1439383, 1439429..1439431,1439435..1439437,1439450..1439455, 1439459..1439461) /locus_tag="B565_1312" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 1439195..1439197 /locus_tag="B565_1312" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(1439282..1439284,1439288..1439290,1439366..1439368, 1439378..1439380) /locus_tag="B565_1312" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene 1439943..1443818 /locus_tag="B565_1313" /db_xref="GeneID:10487230" CDS 1439943..1443818 /locus_tag="B565_1313" /codon_start=1 /transl_table=11 /product="SWI/SNF family helicase" /protein_id="YP_004391965.1" /db_xref="GI:330829013" /db_xref="GeneID:10487230" /translation="MSASTLSSDSYALLATLQLQRVASTRLLQEQLAIGHALIDKLTR LQDAGLVRLRGEQQWSLTAEGTLALILGVRAGLCPAPDWSRVPSLTGQDLTHAVVREL CRGKAGEIPTYFSASDLLTLLDTPDAHQLLAGSSPAWQQMLLEHFSLQLLLDAPYEER WPLANALVRCAPEVQARAKAFEAEWRWLCGDGESTSPTGEDKDAAPGWPALQALAQQS QSGPLGERLLTALGQWQATDEGEAGQWPRSFSALLWLGWLQQADPVIASEQRKKWQRS LTGQFPLLADLLSQWAGDRHGQAVGLFDTLQLPVEELHWGYLWLDLCALARHGAQSPQ VAMLHKWDLTHLLDAEPHHRLMAFCQDLLRILLGEVAKGAPLCQLRGSEESAQEGSDE QDDDGDEDKTAASASWLNWLQGLGRSSGVRKPQERLVWLLHAEGPELECKIQKLSTKG EWTAGRRVDPALLSTQYAAMLDEHDWALVRTLPRVMGRLPRDVWAPLADHPRLFNAKG QKLQLAISAPLLQVVATEQGMSAQLCPDAAARGAHIMPLAQDLWQLILTPQPLLDRLP ALESIPLLPAEGLAELQRTLDAIPELPWHSQVTGLSGNAELAPWPGIPSVQLDWQDGQ LSVKLVTRFEDLPPQPLGKGEAIVRQGIKAYHYWQRDLAAEKGQAQLLRNQLPIGLPG SEWLLQGEQALALVNALPELVDAGVVIHWHQDSARLKSLDEAALSLRIERRQDWFQVE GALALDEHQILDLRLILRQMTPGQRTVQLDEKTSLMLSDKLVERLTMLGAMLDEEQRI NNKLAYPLTRLLSVITTEGDAAWQSLQQEWQQEVDCPDELLTSLRDYQKEGVRWMVTL AHHGFGACLADDMGLGKTLQALIVLRMRQHLGPALVVVPKSVVTNWQEEVTRFAPELD VVVFENPAEREGIIREAKAGQVILINYGMLGSLAEALKSRRWSSMVLDEAQQIKNAGT QRAKLLFQLDGDFRLALSGTPIENHLGELWSLFTFINPGLLGSLGEFKRRFGKAVKDP QHMALLRAVISPFILRRLKQQVLTELPDKTEIIHHISLSPEERQLYEATRREVVQQVQ SADGRALMHVLSGLTRLRRLCCSPELVMPEWSQTSSKLDEAMALLEEAIDGGHRVLVF SQFVDLLSLLRARIEQKSWDYCYLDGGCSAKSRQDSILRFRHEEVPLFLISLKAGGTG LNLTQADTVLHLDPWWNPAVEDQASDRAHRMGQTQPVTVYRLVCEQTVEEKIVALHDE KRALADGLLSGQSEVRGLDVESLRALLMG" misc_feature <1442091..1443809 /locus_tag="B565_1313" /note="Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]; Region: HepA; COG0553" /db_xref="CDD:30899" misc_feature 1442535..1442921 /locus_tag="B565_1313" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 1442550..1442564 /locus_tag="B565_1313" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 1442826..1442837 /locus_tag="B565_1313" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature 1443297..1443674 /locus_tag="B565_1313" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(1443384..1443395,1443453..1443458,1443534..1443542) /locus_tag="B565_1313" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(1443558..1443560,1443621..1443623,1443633..1443635, 1443642..1443644) /locus_tag="B565_1313" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene complement(1443975..1444868) /locus_tag="B565_1314" /db_xref="GeneID:10487231" CDS complement(1443975..1444868) /locus_tag="B565_1314" /codon_start=1 /transl_table=11 /product="DNA replication terminus site-binding protein" /protein_id="YP_004391966.1" /db_xref="GI:330829014" /db_xref="GeneID:10487231" /translation="MDTFTPTAALRQQMAAIEASLNQLADLLGQLDLQEAHVYPLPPV PQGEEHDPIEQIEVGYLNGEAALAATLAAYRDHSARPGCSTKATHRLPGWLRFPAAAA PLLQPLIDQINQHKLDFKALVQQAGGRDEKFELVHTALPGVITLQVYRKLTLLAGELQ SLGFTWADKQTINRLSREQVLEMLERSRRYIPALSNNEEWSKMVDQEVYDIRRLPADA ELRIRRPVKTHPMINLLWLEHTPRKQQIKASLPLLLCSDTPPAVTHLGNYPPKSRQAR RDRKIGGEPIIERLHLYLYQG" misc_feature complement(1443987..1444841) /locus_tag="B565_1314" /note="DNA replication terminus site-binding protein (Ter protein); Region: Ter; cl11502" /db_xref="CDD:187078" gene 1445391..1445600 /locus_tag="B565_1315" /db_xref="GeneID:10487232" CDS 1445391..1445600 /locus_tag="B565_1315" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391967.1" /db_xref="GI:330829015" /db_xref="GeneID:10487232" /translation="MANMTYTETGYQHSSQLNLVARVKMTVLTWLERSRSRRQLSELP EYLLKDIGLNEADRYQETTKPFWRG" misc_feature <1445529..1445594 /locus_tag="B565_1315" /note="Domain of unknown function (DUF1127); Region: DUF1127; cl02276" /db_xref="CDD:154833" gene 1445887..1446912 /locus_tag="B565_1316" /db_xref="GeneID:10487233" CDS 1445887..1446912 /locus_tag="B565_1316" /codon_start=1 /transl_table=11 /product="succinylglutamate desuccinylase" /protein_id="YP_004391968.1" /db_xref="GI:330829016" /db_xref="GeneID:10487233" /translation="MIPQHDFLALTRSHEWQLEPFEFALPDGTRVSVWDTGVLCLEPA SGAGGQPGGCKDIVLSCGIHGNETAPIEICNQLLSRLLSGELSARHRVLFLFGNPAAM NLGLREVEENMNRLFSGAHSKGEGLCNRERIRAMRLEQYVSRFFADPARPRYHYDLHT AIRGSRHEKFAVYPFPHERPHCREQVQFLGACGVRTILLSASPTTTFSYYSSRQHGAH AFTVELGKVRPFGENDMTRFIETRQALQELVTQDEVALEPWRADDFTLFAIDRVITKK SEQFRFLFASDVDNFTEFPQGFVLAEDGELRYTVEKPREAVVFPNANVAIGQRTVLMV VPTRLWE" misc_feature 1445902..1446894 /locus_tag="B565_1316" /note="Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3.5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily...; Region: M14_ASTE; cd03855" /db_xref="CDD:133067" misc_feature 1446049..1446897 /locus_tag="B565_1316" /note="Succinylglutamate desuccinylase / Aspartoacylase family; Region: AstE_AspA; pfam04952" /db_xref="CDD:147229" misc_feature order(1446076..1446078,1446085..1446087,1446205..1446207, 1446226..1446231,1446361..1446363,1446400..1446402, 1446499..1446501,1446511..1446513,1446553..1446555) /locus_tag="B565_1316" /note="putative active site [active]" /db_xref="CDD:133067" misc_feature order(1446076..1446078,1446085..1446087,1446361..1446363) /locus_tag="B565_1316" /note="Zn-binding site [ion binding]; other site" /db_xref="CDD:133067" gene complement(1447073..1448605) /locus_tag="B565_1317" /db_xref="GeneID:10487234" CDS complement(1447073..1448605) /locus_tag="B565_1317" /codon_start=1 /transl_table=11 /product="membrane-bound lytic murein transglycosylase D" /protein_id="YP_004391969.1" /db_xref="GI:330829017" /db_xref="GeneID:10487234" /translation="MAALLLSGCQNLSHQDDRALTAIEPIKSPQVKKKAHKKHSSHFL FGDEQLDEMEETDNLWVRISDDMQLETPDNPRIRQQREWLLRNDKHLATIASRAEPYL YLMVEEIERRELPMELITVPMIESMFDPHARSRSNAVGLWQFVPATGRNFGLRHDNWY DGRRDVLASTNAALDYLEYLNRFFDGDWLQTLAAYNAGEGRVRNAIQRNQRAGKPTDY WSLDLPRETRMYVPKILAMADMISNADKYNIQLPVLANEPKLRVVETGSQIDLNVAAQ LAGLRTSQLKEVNPALSRGVMSPRGPYRLLVPVEYADTLELALADLPKSERIRTRSYQ VTSGDTLSRIAQNHGVSVNELKLANNLRSNNLRRGQQLVIPTHGQVSSKASSASKPQQ LASRGSSQKAKVSYKVRSGDNLWSISQAHGVSHEELAKWNGLNAKSALKPGMKLVVYP KQGKKSDKSMVYQVRRGDSISSIAARFQVAINDVMRWNQLDKGDYLKPGQELTLFVKN NS" misc_feature complement(1447253..1448605) /locus_tag="B565_1317" /note="membrane-bound lytic murein transglycosylase D; Provisional; Region: mltD; PRK10783" /db_xref="CDD:182727" misc_feature complement(1447889..1448263) /locus_tag="B565_1317" /note="Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain. Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic 'goose-type' lysozymes (GEWL). LTs catalyze...; Region: LT_GEWL; cd00254" /db_xref="CDD:29556" misc_feature complement(order(1448021..1448023,1448078..1448080, 1448171..1448173,1448231..1448233)) /locus_tag="B565_1317" /note="N-acetyl-D-glucosamine binding site [chemical binding]; other site" /db_xref="CDD:29556" misc_feature complement(1448231..1448233) /locus_tag="B565_1317" /note="catalytic residue [active]" /db_xref="CDD:29556" misc_feature complement(1447481..1447609) /locus_tag="B565_1317" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cl00107" /db_xref="CDD:153515" misc_feature complement(1447262..1447390) /locus_tag="B565_1317" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1447346..1447348,1447355..1447357, 1447370..1447372,1447379..1447381,1447388..1447390)) /locus_tag="B565_1317" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature complement(1447076..1447357) /locus_tag="B565_1317" /note="FOG: LysM repeat [Cell envelope biogenesis, outer membrane]; Region: LytE; COG1388" /db_xref="CDD:31578" misc_feature complement(1447094..1447228) /locus_tag="B565_1317" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1447178..1447180,1447187..1447189, 1447202..1447204,1447211..1447213,1447220..1447222)) /locus_tag="B565_1317" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" gene complement(1448697..1449461) /locus_tag="B565_1318" /db_xref="GeneID:10487235" CDS complement(1448697..1449461) /locus_tag="B565_1318" /codon_start=1 /transl_table=11 /product="hydroxyacylglutathione hydrolase" /protein_id="YP_004391970.1" /db_xref="GI:330829018" /db_xref="GeneID:10487235" /translation="MYPVITVPAFNDNYIWLIRHENHCLVVDPGDAAPVLERLEALGL VLDAILLTHHHHDHVGGVTDLLAHFPHARLYGPKLDPMPDHHGQWLEDGDQINWHGLA LEVIHVPGHTRGHIAYHGNGMLFCGDTLFSAGCGRLFEGTPEQMYHSLQRLAALPDET LIYCAHEYTLSNLRFAYAVEPDNPAIRRQIGLISKLRQQGLPSLPTRLGDERTFNIFL RCEQDSVKFSAEKHGLKCVENPVDTFTILRQWKDVF" misc_feature complement(1448700..1449452) /locus_tag="B565_1318" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" gene 1449534..1450256 /locus_tag="B565_1319" /db_xref="GeneID:10487236" CDS 1449534..1450256 /locus_tag="B565_1319" /codon_start=1 /transl_table=11 /product="methyltransferase" /protein_id="YP_004391971.1" /db_xref="GI:330829019" /db_xref="GeneID:10487236" /translation="MQVARTEQQIEIPTSWSALPMGDWVAAEIQDRLDNWCPNLFGYH LLKIGALSAELSCKRSSIRHQVGVAPGGRLLDMYGDPLDLPVRTGSVDACLLAHCLDF SADPHQVLREAERVLTDDGWLIISGYNPMSLVGIGHCVPFLRRRMPWSARMFTPGRVT DWLHLLGCEVMFDERFGYSFMGKQSWHSWWRESIGRDYCRAFASVYVIAARKRRFPLI PVRRRWQLPKSLATPGMARQGW" misc_feature <1449768..1449908 /locus_tag="B565_1319" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene complement(1450244..1450708) /locus_tag="B565_1320" /db_xref="GeneID:10487237" CDS complement(1450244..1450708) /locus_tag="B565_1320" /codon_start=1 /transl_table=11 /product="ribonuclease H" /protein_id="YP_004391972.1" /db_xref="GI:330829020" /db_xref="GeneID:10487237" /translation="MLKQIDVYTDGSCLGNPGPGGYGAVMVYGKHRKEISAGFKLTTN NRMELMAAIMGLRTLNEPCKVRLTTDSQYVRQGITQWIIGWKKKGWMTANRQPVKNVD LWKELDAEVGRHQIEWLWVKGHSGHPENERCDELAREAACGKDLAEDTGYQP" misc_feature complement(1450286..1450699) /locus_tag="B565_1320" /note="RNase HI family found mainly in prokaryotes; Region: RNase_HI_prokaryote_like; cd09278" /db_xref="CDD:187702" misc_feature complement(order(1450295..1450297,1450349..1450351, 1450499..1450501,1450565..1450567,1450574..1450582, 1450670..1450681)) /locus_tag="B565_1320" /note="RNA/DNA hybrid binding site [nucleotide binding]; other site" /db_xref="CDD:187702" misc_feature complement(order(1450307..1450309,1450499..1450501, 1450565..1450567,1450679..1450681)) /locus_tag="B565_1320" /note="active site" /db_xref="CDD:187702" gene 1450788..1451522 /locus_tag="B565_1321" /db_xref="GeneID:10487238" CDS 1450788..1451522 /locus_tag="B565_1321" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit epsilon" /protein_id="YP_004391973.1" /db_xref="GI:330829021" /db_xref="GeneID:10487238" /translation="MNTPQLNRQIILDTETTGMNTAGGPVYLGHRIIEIGCVEVINRK LTGNHYHVYIKPDRLVDPEAIQVHGITDEFLRDKPSFSQIADEFLEFIRGAELIAHNA PFDVSFMDYEFSKLGLNFKTADICTITDTLAMARDLFPGKRNNLDVLCDRYGIDNSHR TLHGALLDAEILADVYLLMTGGQTKLNLATESNENENNQDTSIRRLESNRPAIKVVRA CAEVQALHEARLDLVQKKGGSCLWRQ" misc_feature 1450809..1451498 /locus_tag="B565_1321" /note="Proteobacterial; Region: dnaQ_proteo; TIGR01406" /db_xref="CDD:130473" misc_feature 1450812..1451327 /locus_tag="B565_1321" /note="DEDDh 3'-5' exonuclease domain of the epsilon subunit of Escherichia coli DNA polymerase III and similar proteins; Region: DNA_pol_III_epsilon_Ecoli_like; cd06131" /db_xref="CDD:99835" misc_feature order(1450824..1450835,1450839..1450844,1450974..1450979, 1450986..1450991,1451085..1451090,1451094..1451102, 1451220..1451225,1451265..1451267,1451274..1451276, 1451289..1451291) /locus_tag="B565_1321" /note="active site" /db_xref="CDD:99835" misc_feature order(1450824..1450835,1450839..1450844,1450974..1450979, 1450986..1450991,1451085..1451090,1451094..1451099, 1451220..1451225,1451265..1451267,1451274..1451276, 1451289..1451291) /locus_tag="B565_1321" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:99835" misc_feature order(1450824..1450826,1450830..1450832,1451100..1451102, 1451274..1451276,1451289..1451291) /locus_tag="B565_1321" /note="catalytic site [active]" /db_xref="CDD:99835" gene 1451510..1452784 /locus_tag="B565_1322" /db_xref="GeneID:10487239" CDS 1451510..1452784 /locus_tag="B565_1322" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391974.1" /db_xref="GI:330829022" /db_xref="GeneID:10487239" /translation="MAAMSKWCAGLLLLLSLGAAATEVFAPSDIPLLDNRFRIDYGVK EITFIIKRKPGTPSVILVRPDGSKLYVGKVKPADVGWLALPEHDLITLRNPMPGPWQA IGEVDPDNRVRILSDIRLDIAALPMQLYQGEVVKLKAWLLINGKPPKDKYYLSDLGMT VKLQSFSDADKKEVVLDQVLGHYRDDGKGLDEVPGDGIMTAEVTLQDIPGGKYRAMFS TGNQVFVRARYQDVLLYPYPFSYNLSPPSDELGAKLSLLIDRDELDPASVVVKGSVTS NVGGLYEFSETASDPKLDIDLSNIKEVGQHEVKATLYGTTRLGRELKIELPVKTFNVF PPPPPPVEVVSAAAPASSAEATHEAPAEEEMGWLIWALAGGGVLLAVLGGVGFVVIQK RRALKRALAAAQAENQQAGQPAAKLDLNLPEQ" misc_feature 1451591..1452511 /locus_tag="B565_1322" /note="TIGR03503 family protein; Region: TIGR03503" /db_xref="CDD:163297" gene complement(1452878..1454395) /locus_tag="B565_1323" /db_xref="GeneID:10487240" CDS complement(1452878..1454395) /locus_tag="B565_1323" /codon_start=1 /transl_table=11 /product="HD domain-containing protein" /protein_id="YP_004391975.1" /db_xref="GI:330829023" /db_xref="GeneID:10487240" /translation="MDDQILIIDDDDLSLPDAQQAGWKVMIVDDEPEVHRITKITLNK FEFDNRPIDFLHAYSAAQAKELLATTPDVALLLLDVVMEVDHAGLDVVKYVREDLQNK MVRIVLRTGQPGQAPEDDVVTNYDINDYKDKTELTSQKLRTLLRASLRSYRDIRTLES NRQGLEKVIEASKGIFEKRALRQFVEGAQEQLSALLHLGETQIYDVKQYAYEVKDQIL EPLLPGHPAMLLTDAPEILRQAMSKRSNVYNATQMVLYCQNPRHHLLFHIETTRQLSQ IDTSLLTLFTENIIVALENIRLNEVIADNQREIIYRIGELVETRSKESGLHVKRVALY TEQFCHLMGMSEEQSELVKRASPLHDIGKVGIPDAILHKPGKLTAEEWEIMKTHAQLG QDMLSGSDLALFQIGATIAGNHHEKWNGSGYPRGLKGTDIPLEGRIVALADVFDALGS DRCYKKAWPLDKVLALIEEEKGQHFDPQLVELMMANLDKFLEIREQNKDVYIGEH" misc_feature complement(<1453907..1454326) /locus_tag="B565_1323" /note="Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]; Region: OmpR; COG0745" /db_xref="CDD:31088" misc_feature complement(1452899..1454074) /locus_tag="B565_1323" /note="Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms]; Region: COG3437" /db_xref="CDD:33243" misc_feature complement(1453484..1453957) /locus_tag="B565_1323" /note="Domain of unknown function (DUF3369); Region: DUF3369; pfam11849" /db_xref="CDD:152285" misc_feature complement(1453028..1453417) /locus_tag="B565_1323" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature complement(order(1453067..1453069,1453316..1453321, 1453415..1453417)) /locus_tag="B565_1323" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature complement(1453316..1453318) /locus_tag="B565_1323" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene 1454720..1455523 /locus_tag="B565_1324" /db_xref="GeneID:10487241" CDS 1454720..1455523 /locus_tag="B565_1324" /codon_start=1 /transl_table=11 /product="Vibriobactin utilization protein ViuB" /protein_id="YP_004391976.1" /db_xref="GI:330829024" /db_xref="GeneID:10487241" /translation="MSPSLPPNRPRLLTVKAITQITPHLRRITFGGSELADYPFTCGG AHIKVMLAQPHQVEPVLPAMTPSGPRWSDPADKPVIRTYTIRAFRRDEQEIDIDFVLH GDGGPASAFATHAKPGEKVILSGPGGPNPMLQSADHYCLVGDLTALPAIMAMCEVMPA DARGEIAILVPDQADAQPLTLPVGVRCHWFVGEPESSGLLEHVIALPLVRDGGFFWLG GEEALVLPLRRHFRSVLEVDRQSLYAVPYWRRGKSEEAYHQTRHDVMDN" misc_feature 1454759..1455487 /locus_tag="B565_1324" /note="Siderophore-interacting protein [Inorganic ion transport and metabolism]; Region: ViuB; COG2375" /db_xref="CDD:32522" misc_feature 1454762..1455466 /locus_tag="B565_1324" /note="Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family. Siderophores are produced in various bacteria (and some plants) to extract iron from hosts. Binding constants are high, so iron can be pilfered from...; Region: siderophore_interacting; cd06193" /db_xref="CDD:99790" misc_feature order(1454960..1454971,1455011..1455013,1455017..1455019, 1455023..1455025,1455035..1455046,1455155..1455157, 1455458..1455466) /locus_tag="B565_1324" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99790" misc_feature order(1454960..1454962,1454966..1454971) /locus_tag="B565_1324" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99790" misc_feature order(1455035..1455037,1455044..1455046,1455053..1455055, 1455071..1455073) /locus_tag="B565_1324" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99790" misc_feature order(1455155..1455160,1455224..1455232,1455374..1455379) /locus_tag="B565_1324" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99790" gene 1455699..1456715 /locus_tag="B565_1325" /db_xref="GeneID:10487242" CDS 1455699..1456715 /locus_tag="B565_1325" /codon_start=1 /transl_table=11 /product="Fe3+siderophore ABC transporter permease" /protein_id="YP_004391977.1" /db_xref="GI:330829025" /db_xref="GeneID:10487242" /translation="MVKYQTPLFWLALFLLCTLFCLSLATGAGVYGAREVFGYLMGDA PWASDEKLAMVLNTLRLPRTLCAMVVGASLSLAASLLQSATRNPLAEPGLLGVSEGAV FALVVGITWFGAESAYSYLIWAGFGALFGNVIVLVLSTITGSANPLKLILVGVALSAT FRGLSSFLLFSNKMVLEQYRFWVLGSLSAANLDAIIAVLPFVLAAFVITLLLCRQLTL MQMGDSQAQALGIRPNRVRIGVLLAATLFTASAIAIAGPIGFVGFLAAYCGRLVEPVK LSVQVCFSALFGMLFLLLADILARWLIQPFELPNGVILALIGAPVLIAIVHRGGFRTL LTVK" misc_feature 1455951..1456676 /locus_tag="B565_1325" /note="Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+. PBP-dependent ABC transporters consist...; Region: TM_ABC_iron-siderophores_like; cd06550" /db_xref="CDD:119348" misc_feature order(1455954..1455962,1456326..1456331,1456335..1456343, 1456347..1456352,1456356..1456373,1456377..1456385, 1456506..1456508,1456527..1456529) /locus_tag="B565_1325" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119348" misc_feature order(1455957..1455959,1455963..1455965,1455978..1455980, 1456143..1456145,1456149..1456154,1456161..1456166, 1456173..1456178,1456185..1456187,1456194..1456199, 1456203..1456205,1456236..1456241,1456248..1456250, 1456476..1456478,1456632..1456634,1456641..1456646, 1456653..1456655,1456662..1456667,1456674..1456676) /locus_tag="B565_1325" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119348" misc_feature order(1456203..1456205,1456278..1456280,1456452..1456454, 1456464..1456466,1456596..1456598,1456623..1456625) /locus_tag="B565_1325" /note="putative PBP binding regions; other site" /db_xref="CDD:119348" gene 1456723..1457760 /locus_tag="B565_1326" /db_xref="GeneID:10487243" CDS 1456723..1457760 /locus_tag="B565_1326" /codon_start=1 /transl_table=11 /product="iron chelate uptake ABC transporter permease" /protein_id="YP_004391978.1" /db_xref="GI:330829026" /db_xref="GeneID:10487243" /translation="MRTPTDMLCLRAGNRSLLIHLPSWRWLALLAMALLALALLALSV GGGKLGFVGVVNTLLGEGTRLEQLTLFKIRLPRILGVVVAGAAMGLSGCLVQTLVRNR LATPDMVGVNNGASLAIIVFSLYLTVGSWPWWAAPIGAIFAALVLYALCRKPGEQGYL FVVIGIGLSELFEALGQFVMSTQALLHLSSLYLWNMGSFIAVGYSTITPIAILLLLLC PWIVYLSRSLAVLRFGPEMARGLGVNGDRVQLGILAQAILVAALGTAIGGPVVFIAMA APILASWLVKDRVVPLWLAALSGALLLLASDTLVRVLASPHEVATGIMTRILGGLLLL FLLVNDRQRAD" misc_feature 1456954..1457586 /locus_tag="B565_1326" /note="Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+. PBP-dependent ABC transporters consist...; Region: TM_ABC_iron-siderophores_like; cd06550" /db_xref="CDD:119348" misc_feature order(1457008..1457010,1457020..1457028,1457386..1457391, 1457395..1457403,1457407..1457412,1457416..1457433, 1457437..1457445,1457566..1457568) /locus_tag="B565_1326" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119348" misc_feature order(1457023..1457025,1457029..1457031,1457044..1457046, 1457200..1457202,1457206..1457211,1457218..1457223, 1457230..1457235,1457242..1457244,1457251..1457256, 1457263..1457265,1457296..1457301,1457308..1457310, 1457536..1457538) /locus_tag="B565_1326" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119348" misc_feature order(1457263..1457265,1457338..1457340,1457512..1457514, 1457524..1457526) /locus_tag="B565_1326" /note="putative PBP binding regions; other site" /db_xref="CDD:119348" gene 1457760..1458563 /locus_tag="B565_1327" /db_xref="GeneID:10487244" CDS 1457760..1458563 /locus_tag="B565_1327" /codon_start=1 /transl_table=11 /product="Fe3+siderophore ABC transporter ATP-binding protein" /protein_id="YP_004391979.1" /db_xref="GI:330829027" /db_xref="GeneID:10487244" /translation="MTLTVNRLHFAYQQTPILRDISFSVPRGKLVGIVGPNGCGKSTL LKLLSGQMKAQRGEILLKGKPLASYPMKGLARGLAYLPQRPTLPAGILVEQLVQYGRH PHQGWFNQWGEEDARMVRIACERMQLESIWQQSAASLSGGQAQRAWLAMILAQDSDMV LLDEPTSALDIGHQTEVMEAIHRITAEGKTVLLVIHDLAMAARYCDELIAIGEGTIAA MGPAREVVTKDLIDRLYQTSVDILHAPGDGAPIIVPRRHEHACQWRSAS" misc_feature 1457760..1458530 /locus_tag="B565_1327" /note="ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]; Region: FepC; COG1120" /db_xref="CDD:31317" misc_feature 1457769..1458419 /locus_tag="B565_1327" /note="ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC...; Region: ABC_Iron-Siderophores_B12_Hemin; cd03214" /db_xref="CDD:72973" misc_feature 1457862..1457885 /locus_tag="B565_1327" /note="Walker A/P-loop; other site" /db_xref="CDD:72973" misc_feature order(1457871..1457876,1457880..1457888,1458006..1458008, 1458246..1458251,1458345..1458347) /locus_tag="B565_1327" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72973" misc_feature 1457997..1458008 /locus_tag="B565_1327" /note="Q-loop/lid; other site" /db_xref="CDD:72973" misc_feature 1458174..1458203 /locus_tag="B565_1327" /note="ABC transporter signature motif; other site" /db_xref="CDD:72973" misc_feature 1458234..1458251 /locus_tag="B565_1327" /note="Walker B; other site" /db_xref="CDD:72973" misc_feature 1458258..1458269 /locus_tag="B565_1327" /note="D-loop; other site" /db_xref="CDD:72973" misc_feature 1458333..1458353 /locus_tag="B565_1327" /note="H-loop/switch region; other site" /db_xref="CDD:72973" gene 1458646..1459566 /locus_tag="B565_1328" /db_xref="GeneID:10487245" CDS 1458646..1459566 /locus_tag="B565_1328" /codon_start=1 /transl_table=11 /product="iron complex transport system, periplasmic binding protein" /protein_id="YP_004391980.1" /db_xref="GI:330829028" /db_xref="GeneID:10487245" /translation="MMKRFAALATAILMLAAPLVQAQEMREVTDAFGQKVQVPVKPLR VVTLSEFDLDSALALGLTPIGAVNGRGQPTMPRYLLEKGVSDIKVIGDLDSPNLESLI ALEPDLILTGQTRPELLTLLGEIAPTVVTGKWGEPWQDMFRRTAHTLNRDKEGEAFLK RYEERLAEARSKLADHQGESISIVRWNPKGPSFMYQGTFASSVVESMGLVRPSKQQGS GAPHSPALSLESLNLLDADWLVIGTLSATGDAVDAMRQAEQTPAFQQLPVIKAKRFGA VDGSLWTSSGGPQAALKVIEDVEQLLATRS" misc_feature 1458766..1459518 /locus_tag="B565_1328" /note="Fe3+-siderophore binding domain FhuD. These proteins have been shown to function as initial receptors in ABC transport of Fe3+-siderophores in many eubacterial species. They belong to the TroA-like superfamily of helical backbone metal receptor...; Region: FhuD; cd01146" /db_xref="CDD:29749" misc_feature 1458778..1459488 /locus_tag="B565_1328" /note="Periplasmic binding protein; Region: Peripla_BP_2; pfam01497" /db_xref="CDD:144914" misc_feature order(1458868..1458870,1458922..1458927,1458988..1458990, 1459222..1459224) /locus_tag="B565_1328" /note="siderophore binding site; other site" /db_xref="CDD:29749" gene complement(1459686..1460039) /locus_tag="B565_1329" /db_xref="GeneID:10487246" CDS complement(1459686..1460039) /locus_tag="B565_1329" /codon_start=1 /transl_table=11 /product="secretion protein HlyD" /protein_id="YP_004391981.1" /db_xref="GI:330829029" /db_xref="GeneID:10487246" /translation="MNYKTLTLTLLLGLATHTNLQAEEMMHHEGHEMSQTGGMSEQAE MMMTKGIITRLDEGSGKVGIKHEAIENLKMPAMTMVFRVADPAQLKGLKVGDAIHFHA ESQSGKLTVTAIQPQ" misc_feature complement(1459731..1459892) /locus_tag="B565_1329" /note="Copper binding periplasmic protein CusF; Region: CusF_Ec; cl02363" /db_xref="CDD:186524" gene complement(1460084..1463212) /locus_tag="B565_1330" /db_xref="GeneID:10487247" CDS complement(1460084..1463212) /locus_tag="B565_1330" /codon_start=1 /transl_table=11 /product="putative cation efflux system transmembrane protein" /protein_id="YP_004391982.1" /db_xref="GI:330829030" /db_xref="GeneID:10487247" /translation="MIPSIIRWSVGNRFLVLLLTLMLTAWGLWSVKQTPVDALPDLSD VQVIIKTSYPGQAPQVVEDQVTYPLTTAMLAVPGATTVRGYSFFGDSFVYVLFDDNTD LYWARARVLEYLSQVAPNLPASARPQLGPDATGVGWVYQYALVDKTGKHDLSQLTSLQ NWFLKYELQTVEGVSEVATVGGMVRQYQVRVDPDKLRAYGIPLSLIETAIKQGNQETG ASVIEMAEAEYMVRSNGYLKSVEDLKQIPLGTTVRGAPLLLGDVADVVTGPQMRRGIA ELNGEGEVVGGIIVMRYGENAQHTIDGVKARLAELKSSLPEGVEIVTVYDRSDLIQRA IDNLSGKLLEEFAVVVLVCLAFLFHLRSSLVVVITLPIAILVAFIVMHLQGINANIMS LGGIAIAIGAMVDGAIVMIENVHKHMEREALTDKNRWRIITEASIEVGPAIFFSLLII TISFLPVFALEAQEGRMFHPLAFTKTYAMAAAAALAITLVPVIMGYFIRGKVLAEQAN PLNRGLSQAYVPLLKAVLVRPKTTLAVAAVVTVAGFWPLKYLGSEFIPPLDEGDIMYM PTTAANISVGKAREILQQTDKLIRTVPEVQNVFGKAGRAESATDPADLVMMETSIQLK PRDQWRLGMTPEKLKEELDSLIRFPGLTNAWVPPIKTRIDMLATGIKTPVGIKIAGPD LKVIQQLGQQLEQVVGKVEGASSVYAERVAGGRYVKVDIDRLKAARYGLNIADVQAVL ATAVGGMEVGQTIEGRERYPINLRYPQSYRDSVASLELLPVVTPSGARIALADVARVY ISDEAPMLRSENARLNGWVYVDIRGRDVGSFVAEAKAEVNKQLVLPAGYALTWSGQYE YMERAKARLAYVVPLTVAIIVLLLYLAFRRVQEVLLILTTLPLAVVGGIWTLWLLDFN LSVAVGVGFIALAGVAVETGVLMLVYLNHAWDDLVASGKPDKAGLHRAVIHGAALRLR PKMMTVVTIIAGLLPIMWSHGTGSEVMQRIAAPMIGGMVSALVLTLLVLPAAYYLWRS RSLGKSANPQSE" misc_feature complement(1460177..1463212) /locus_tag="B565_1330" /note="Putative silver efflux pump [Inorganic ion transport and metabolism]; Region: COG3696" /db_xref="CDD:33492" gene complement(1463209..1464717) /locus_tag="B565_1331" /db_xref="GeneID:10487248" CDS complement(1463209..1464717) /locus_tag="B565_1331" /codon_start=1 /transl_table=11 /product="Copper/silver resistance periplasmic protein" /protein_id="YP_004391983.1" /db_xref="GI:330829031" /db_xref="GeneID:10487248" /translation="MNKTVLMSALLLALGAGGGYWAAKQTSAGTAAKEKTPLYWVNPM DPRDKRDGPAKDNMGMDFIPVYEEQKNGSPGTVTISPEIQQNLGVRLAKVEKLPIHQQ IETVGYVGYDEDRLEAVNARMAGWIRTLAIKSEGQQVSKGSLIYELYAPDLVNAQHEY LLALNTANPLLLRAAEGKLKSLQVPADQIAALKRSRQVQETVRIYAPSSGYASELKVR EGQYVEPAAALFNISTLKQVWVSAEVFERQAAQLKVGDPVTMTLDYAPSRSWQGKVDY LYPTLDAATRTLKVRLRFDNPDEFLKPNMFAKVSIRTGQGEPQLVVPSEAVIRTGSQD RLVLALGDGSFKSVAVTLGPQFGDKVAIKAGVEAGDNIVSSAQFLLDSESAIDSDFQR MTAVRPAQVWTQGEVESIDRANRTLMVSHQPIPEWQWPAMEMEFTVAEGVDISKLVEG ETLHLQVMQEGDEYRITTIHQEKAPTSGHALEQEKDEMEGMGHSQHNMGAKP" misc_feature complement(1463533..1464660) /locus_tag="B565_1331" /note="copper/silver efflux system membrane fusion protein CusB; Provisional; Region: PRK09783" /db_xref="CDD:182073" misc_feature complement(1463332..1463505) /locus_tag="B565_1331" /note="Copper binding periplasmic protein CusF; Region: CusF_Ec; cl02363" /db_xref="CDD:186524" gene complement(1465011..1465511) /locus_tag="B565_1332" /db_xref="GeneID:10487249" CDS complement(1465011..1465511) /locus_tag="B565_1332" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391984.1" /db_xref="GI:330829032" /db_xref="GeneID:10487249" /translation="MSLTQLAARLPSVALVRLLLALLLVCNLTLCISWHGSPLSSEPT PSSAQSMVMFDSSMAMADSDISHAMPAMDHPDDVMPLSCHQGDEGSAMGDECQMQTGV NALSFGAMTLLGVLVALLLFPLLLCNNFATALLDNWLRDPFLRSRGTHPPSWPRRHLM LSVLRH" gene 1465904..1467088 /locus_tag="B565_1333" /db_xref="GeneID:10487250" CDS 1465904..1467088 /locus_tag="B565_1333" /codon_start=1 /transl_table=11 /product="putative fatty acid transport protein" /protein_id="YP_004391985.1" /db_xref="GI:330829033" /db_xref="GeneID:10487250" /translation="MQPRLLSLMLAALLSPSAMAGGLALYETSTANSALANAGSAARA QGADTIASNPAGMTKLEGTQLQVNGGVVYGDLELDLDSGGNNGGNALQTAPLGSLYLT HAIDDQWVAGIGVFGSHGLGIDYGDGWDGRGYTQSAKLTGIAFAPSLAYRIDSNWSVG ASLIAMNGSLEASVDLTSGMGEGREFSNSDWAYGASFGVLYELDQHSRIGLSYFSELK WELEDQLFPRADVAGLGVEIMIPQTITLSGYHQLNDQWALLASANWQQWSRFGDIGVA SAMGSQTIDMNYKDTWHASLGAQVDVTPALRLSSGIGYDSSAVSDEYRTVMLPVGSGW RWGLGASYQLSPATKVEASYTLAWLGDMPVDQDGIGRPHLSGSYNNSYLNFFNIGVQH QF" misc_feature 1466045..1467058 /locus_tag="B565_1333" /note="Outer membrane protein transport protein (OMPP1/FadL/TodX); Region: Toluene_X; cl09488" /db_xref="CDD:195847" gene 1467361..1467678 /locus_tag="B565_1334" /db_xref="GeneID:10487251" CDS 1467361..1467678 /locus_tag="B565_1334" /codon_start=1 /transl_table=11 /product="Mg2+ and Co2+ transporter" /protein_id="YP_004391986.1" /db_xref="GI:330829034" /db_xref="GeneID:10487251" /translation="MPAIMVLLDSEIFMGVITVITLYVVLYLVYLLWQLHEIAVHRAK VSESVHITLVFALSLCGLFIDKTWWVLAVIIAFARWDVLSERMSLIIGHGIRRGRHEG EAS" gene 1467675..1468760 /locus_tag="B565_1335" /db_xref="GeneID:10487252" CDS 1467675..1468760 /locus_tag="B565_1335" /codon_start=1 /transl_table=11 /product="multidrug resistance efflux pump" /protein_id="YP_004391987.1" /db_xref="GI:330829035" /db_xref="GeneID:10487252" /translation="MKEILLPYILIVWLLVKLNILPWNLKTGFWSTAIGALLALGLLT TSRHLAPVDFTDSATVKAPHAVLGPLLGINQFHQIDQIYVAHNQRVARGQPIYSLADW ESNGKAQALSYQIDAQHAQVASEVSQQRAIQSRLNLNHKELARLTQLGNFASIQSRDQ LQTQIDGDLAQLSASEAKVQAIEAQVLNLETELALQERRNEEKVIRAPFDGQVSIVNI ASGSRTGNMHLYDTSRKFLEFRIPDQSFRNIAPGQFAEFYVDAYPGRIFRARVHSVLT GTGEAQMSVAQGDQDVRQHVGNNMSSHGRTVVLDMLVPDGVDLPIGATGSAWISAHKP HPLLGFIDIIGAATVRLKAMKAYLFAM" misc_feature 1467906..>1468496 /locus_tag="B565_1335" /note="RND family efflux transporter, MFP subunit; Region: RND_mfp; TIGR01730" /db_xref="CDD:162505" gene complement(1468821..1471925) /locus_tag="B565_1336" /db_xref="GeneID:10487253" CDS complement(1468821..1471925) /locus_tag="B565_1336" /codon_start=1 /transl_table=11 /product="hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter" /protein_id="YP_004391988.1" /db_xref="GI:330829036" /db_xref="GeneID:10487253" /translation="MFSKFFIERPIFASVISIIIVLGGLAAMRALPIEQYPQITPPVV SVTAFYPGATPEVISQTVAAPLEQQINGVERMIYMQSGSASNGQMNLNVYFEIGTDPD QATINVNNRVSAAMAQLPEEVKKQGVTVKKKSTSILQVVTLQSPNGSFDTTYLSNYAL LNIIDELKRIPGIGDTTLFGGTDYAMRIWLRPDRLAQLELTPSDVIGAIREQNTQFAA GKIGAQPTTAPIDFTYTVQTKGRLEDVKEFQNIIVRSMPDGSKIRVRDVARVELGGKD YDLVARANGKPAIGIATYLQPGANAVAVADAVHATMERLKERFPQDIEYQIPYDTTEF VKISIEEVVHTLFEAIVLVFVVVYLFLQNFRATLIPCIAVPVSLIGTFAGMLVLGFSI NLLTLFGMVLAIGIVVDDAIVVLENVERIMSEKKCSAKEAAILAMQEVSGPVVAIVLV LCAVFLPVAFMGGMTGVMYKQFAITVAVSVAISGLVALTLSPALCAVLLKEGHHKPAR FFVWFNEKFDQLTRGYVRGVAFLNRRVGVAFAIIAVLILSIYGLFLKVPGELVPNEDQ GYLISAVMLPDAAAMSRTQAVADQFDKIAMANPHVKDVITFSGFDILSNAIISNSGMT FITLKDWSERQGAGQDSFSLAKTFQGLSLMGLADGFVASFNPPPIQGMSTTGGLEAYL QNRGTGNAQAFSGEVQRFLEAAKARPEFASVTSTYRANVPQVYLDLDREKAKALGLPI NAVFDTMQATFGQVYVNDFNQFGRTYRVQLQSEADYRAKKSDIRNVYVRSDKGEMIPL SSLVTVRDATGPELVERFNIFQAAKIMAQPAPGYSSGQAIAALEEVANEALGNDAKLE WTGSAYQEKAAAGSAGMAFGFGIVMIFLILAAQYERWSLPFAVITAVPFALFGALLAT WLVGLTNNVYFQIGLVTLVGLAAKNAILIVEFAVMKHEEGMSLIESALEAARLRFRPI VMTSLAFILGCVPLVTSSGAGAASRHALGWPVIGGMLAATFIAIFFIPLFFRLIMRRS EKRA" misc_feature complement(1468824..1471922) /locus_tag="B565_1336" /note="The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Region: 2A0602; TIGR00915" /db_xref="CDD:162104" gene complement(1471935..1473137) /locus_tag="B565_1337" /db_xref="GeneID:10487254" CDS complement(1471935..1473137) /locus_tag="B565_1337" /codon_start=1 /transl_table=11 /product="Acriflavin resistance protein A" /protein_id="YP_004391989.1" /db_xref="GI:330829037" /db_xref="GeneID:10487254" /translation="MMKVPNAGREVYKRSLLTLALISGLSACGGETTQTAQTMPAVPV VVAEVKLTDVPLTTEMVGETAGFREIDVRSRVSGILLKRTYVEGQPVTAGQELFLIDP EPYKVALEQAKGTLAQEQARLNKARADRDRIIPLFKRQVVSRKDYDDTIANYEAAIAS HQAAQAKVKEAELNLSYTQVTAPINGMASKSSQSEGSLISTSGDNGLLTTITQFDPLY VNFSYSEQDRLNFENSVKKGVIEAKDATTWRTHIRLADGSLYPEAGKLNFSDNRVDPQ TGTIRARAIFDNKDGVLLPGQFVRMTIDLGTRKNAIVVPPRAIVQSQADRMVMVVDAD NKVVPRPVTLGAAVDSGVLIESGLQAGERYIVEGLMKARPGAVVKPVSADEMKAITGK VVSQSAAK" misc_feature complement(1471986..1473095) /locus_tag="B565_1337" /note="periplasmic multidrug efflux lipoprotein precursor; Reviewed; Region: PRK09578" /db_xref="CDD:169982" gene complement(1473522..1474328) /locus_tag="B565_1338" /db_xref="GeneID:10487255" CDS complement(1473522..1474328) /locus_tag="B565_1338" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease III" /protein_id="YP_004391990.1" /db_xref="GI:330829038" /db_xref="GeneID:10487255" /translation="MKIISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPL ADVEAMGYHVEFHGQKAHYGVAIMSKQKPVKVEKGFPTDDEEAQRRMIMATFEREDGS LIKVMNGYFPQGESQDHETKFPAKQKFYEDLQHYLETNHTPDDQLVLIGDMNISPTDL DIGIGEANRKRWLRDGKCSFLPIEREWMERLKGFGLTDTFRAANPTECERFSWFDYRS KGFDENRGLRIDLIMASDALKDSVTETGIDYELRGIEKPSDHAPIWACFA" misc_feature complement(1473528..1474328) /locus_tag="B565_1338" /note="Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases; Region: ExoIII-like_AP-endo; cd09086" /db_xref="CDD:197320" misc_feature complement(order(1473549..1473551,1473867..1473869, 1473873..1473875,1473990..1473992,1473999..1474001, 1474227..1474229,1474308..1474310)) /locus_tag="B565_1338" /note="putative phosphate binding site [ion binding]; other site" /db_xref="CDD:197320" misc_feature complement(order(1473549..1473554,1473639..1473641, 1473867..1473869,1473873..1473875,1473999..1474001, 1474227..1474229,1474308..1474310)) /locus_tag="B565_1338" /note="putative catalytic site [active]" /db_xref="CDD:197320" misc_feature complement(order(1473549..1473551,1473558..1473563, 1473639..1473644,1473648..1473650,1473678..1473683, 1473690..1473692,1473867..1473869,1473873..1473875, 1473963..1473965,1473984..1473986,1473990..1473992, 1473999..1474001,1474146..1474151,1474227..1474229, 1474287..1474295,1474299..1474304)) /locus_tag="B565_1338" /note="active site" /db_xref="CDD:197320" misc_feature complement(order(1473549..1473554,1474227..1474229, 1474302..1474304)) /locus_tag="B565_1338" /note="metal binding site A [ion binding]; metal-binding site" /db_xref="CDD:197320" misc_feature complement(order(1473558..1473563,1473678..1473683, 1473963..1473965,1473984..1473986,1473990..1473992, 1473999..1474001,1474146..1474151,1474287..1474295, 1474299..1474304)) /locus_tag="B565_1338" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:197320" misc_feature complement(order(1473549..1473551,1473642..1473644, 1473648..1473650,1473690..1473692,1473867..1473869, 1473873..1473875,1473990..1473992,1473999..1474001)) /locus_tag="B565_1338" /note="putative AP binding site [nucleotide binding]; other site" /db_xref="CDD:197320" misc_feature complement(order(1473549..1473551,1473867..1473869, 1473873..1473875,1473999..1474001)) /locus_tag="B565_1338" /note="putative metal binding site B [ion binding]; other site" /db_xref="CDD:197320" gene complement(1474443..1475405) /locus_tag="B565_1339" /db_xref="GeneID:10487256" CDS complement(1474443..1475405) /locus_tag="B565_1339" /codon_start=1 /transl_table=11 /product="putative potassium channel protein" /protein_id="YP_004391991.1" /db_xref="GI:330829039" /db_xref="GeneID:10487256" /translation="MAMCRYLVADGRHCSEEAGEHDLCHWHDPHHTHQEAHTAEALEQ YVRAGGLCHGLQLSRANLAGLNLVNKESDQGFLLEQCNLYRANLRGGHLYGLRMKGGS LMKADLSDANLQCATLDDVNLLGIRWHNTRLDNMQTGKRVMQDRKGRRERDPKQARIW FKEAEETYRDLRKASEAQGIFTMSGNYIQQELTMRRLQLPFWSTQRFTSWVVDLFCGY GEAPMRVVLFSLLLIFICSIFYFFCGLHFQGEHLIYQPGAPLEQNAIFLLECLYYSVV TFTTLGYGDFTPVGLSRIFAAFEAFTGSFTLALFVVVFVKKMTR" misc_feature complement(<1475001..>1475264) /locus_tag="B565_1339" /note="Pentapeptide repeats containing protein [Function unknown]; Region: COG1357" /db_xref="CDD:31548" misc_feature complement(1474461..>1474607) /locus_tag="B565_1339" /note="Ion channel; Region: Ion_trans_2; cl11596" /db_xref="CDD:196264" gene complement(1475472..1477118) /locus_tag="B565_1340" /db_xref="GeneID:10487257" CDS complement(1475472..1477118) /locus_tag="B565_1340" /codon_start=1 /transl_table=11 /product="response regulator with TPR repeat" /protein_id="YP_004391992.1" /db_xref="GI:330829040" /db_xref="GeneID:10487257" /translation="MQTPEQEPEKKSPAKPQRILMVNEQRSFQVMMKAMLLNLGISNI TYSNTAEDARRRCQKGSFDIYLIDYDLGVGENGRQLLESLRDKDLIPPQSVVIMVSGD SSRAMVLSALEAEPDEYLMKPFSQEQFSFRLKRALARRNALASVFTALADDNLAALIT ACAERADAVPRFANYCRCLQADTHLKLGQAQEARALMRQLLAGQENSWARLTLGKACN TLGLHEEAVSHLQATLKNTPLMVEAHLWLAESLLALGNDEQAQQELRRAVDISPQSVQ LSRRLAEVCLQRHDYAQAKDVLMSLIDLSRNSIHRTPHYLGAYIQTLTLYALNSNDSY HIANLQKQVNSALSRIRDSLMMSEFNYPVFEQICQARVQIALGELLKGKKMLYRANQN WLDEPATMPPALLGETILALYQLGEFEYAESLQGLLAEDEDRLLTTCIQATRDDKTVL ERRQRYQQLNDLGIKAYQSGELEQALGHFREALRRAPANTGAALNKIQVLLQLMQKNR KSPEFGAECKDTLDVLDGIPLNPAQQERFRKLRQEFNQFS" misc_feature complement(1476735..1477064) /locus_tag="B565_1340" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature complement(1476732..1477061) /locus_tag="B565_1340" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(1476750..1476755,1476762..1476764, 1476819..1476821,1476888..1476890,1476915..1476917, 1477047..1477052)) /locus_tag="B565_1340" /note="active site" /db_xref="CDD:29071" misc_feature complement(1476915..1476917) /locus_tag="B565_1340" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(1476888..1476896,1476903..1476908)) /locus_tag="B565_1340" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(1476747..1476755) /locus_tag="B565_1340" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(<1475847..1476584) /locus_tag="B565_1340" /note="putative PEP-CTERM system TPR-repeat lipoprotein; Region: PEP_TPR_lipo; TIGR02917" /db_xref="CDD:188258" misc_feature complement(1476198..1476482) /locus_tag="B565_1340" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(1476216..1476218,1476225..1476227, 1476237..1476239,1476273..1476275,1476318..1476320, 1476327..1476329,1476339..1476341,1476375..1476377, 1476420..1476422,1476429..1476431,1476441..1476443, 1476477..1476479)) /locus_tag="B565_1340" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature complement(order(1476255..1476260,1476267..1476272, 1476279..1476284,1476360..1476365,1476372..1476377, 1476381..1476386,1476471..1476476)) /locus_tag="B565_1340" /note="binding surface" /db_xref="CDD:29151" gene complement(1477278..1478324) /locus_tag="B565_1341" /db_xref="GeneID:10487258" CDS complement(1477278..1478324) /locus_tag="B565_1341" /codon_start=1 /transl_table=11 /product="thiamine biosynthesis lipoprotein" /protein_id="YP_004391993.1" /db_xref="GI:330829041" /db_xref="GeneID:10487258" /translation="MIAITPVAAMRGLLLTLLLALAGCQPTPPAQTRIQGKTMGTYYV VTLSDSYPGGEPALKSDVESLLARMNKEISTYDPGSLISRFNQGPANTPFAIPPAMAI IVQQGIDAGKLTNGKLDVTVGPLVNLWGFGPDKRPVKRPDEAAIVAARHKVGIDKLTL TSQGDHFLLEKTIPDLYLDLSTLGEGAASDEIAALLEGKGVHNYLIEVAGAVRSKGNN SKGSPWKVAIVEPSDQPGAFSDIVIPNGMALSTAGSYRNYYELDGQRYSHIIDPATGQ PVTHKLVSASVITPTTLEADALDTALMVMGPEAGMAFAKQHQLAVYLIIKTEQGFKAE YTPQFAPYLAEKKR" misc_feature complement(1477296..1478252) /locus_tag="B565_1341" /note="ApbE family; Region: ApbE; cl00643" /db_xref="CDD:193897" gene 1478660..1479100 /locus_tag="B565_1342" /db_xref="GeneID:10487259" CDS 1478660..1479100 /locus_tag="B565_1342" /codon_start=1 /transl_table=11 /product="Azurin" /protein_id="YP_004391994.1" /db_xref="GI:330829042" /db_xref="GeneID:10487259" /translation="MKKAITLLFLSTLAAPVLADECALVIEGNDAMQYNLKEMSVPAT CKEVTVTLNHTGKLPVTAMGHNWVLASTADYQTVATAGMSAGAENGYLPKDDPRVLAH TKLIGGGESSSVTFKTDGLAGKDLTFFCSFPGHFAMMKGSFKVN" misc_feature 1478723..1479094 /locus_tag="B565_1342" /note="Cytochrome C oxidase subunit II, periplasmic domain; Region: COX2; cl11412" /db_xref="CDD:196221" gene complement(1479215..1479772) /locus_tag="B565_1343" /db_xref="GeneID:10487260" CDS complement(1479215..1479772) /locus_tag="B565_1343" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391995.1" /db_xref="GI:330829043" /db_xref="GeneID:10487260" /translation="MITLIKESDHQKMPWKNQQGTTSQILISPKGSSLAKLDFDYRLS SAPIKSAGPFSPFPGYQRILLPVSGAGFVLNGHPYATFEAAHFSGDEETHCELLKKEV TDLGLIYHPDRISANVRVLNLPFPLTLTLEPEKTYLCHLLSGQLTVQDKEVAINETLV VTGEESIHFECQKKTAIAFFTLQAK" misc_feature complement(1479227..1479760) /locus_tag="B565_1343" /note="HutD; Region: HutD; cl01532" /db_xref="CDD:186446" gene complement(1479858..1480511) /locus_tag="B565_1344" /db_xref="GeneID:10487261" CDS complement(1479858..1480511) /locus_tag="B565_1344" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391996.1" /db_xref="GI:330829044" /db_xref="GeneID:10487261" /translation="MELVLGPLEARVIGCLIEKEICTPDQYPLSLNALVNACNQKSNR EPVLELSELDIRAVVDELIRKRLVVNTAGFNARVPRYQHRFCNTEFGELKFSAQELGI VCELLLRGPQTPGELRSRTNRLCSFDDVTEVDAVLTQLIERGPYVVKLPREPGKRESR YAHLFSGEVDIQAMMDAAAAYASPAADRLSELEQEVNELKSRLAAMEARLAALDGQG" misc_feature complement(1479912..1480511) /locus_tag="B565_1344" /note="hypothetical protein; Provisional; Region: PRK11239" /db_xref="CDD:183048" misc_feature complement(1480044..1480499) /locus_tag="B565_1344" /note="Protein of unknown function, DUF480; Region: DUF480; cl01209" /db_xref="CDD:174583" gene complement(1480651..1482789) /locus_tag="B565_1345" /db_xref="GeneID:10487262" CDS complement(1480651..1482789) /locus_tag="B565_1345" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391997.1" /db_xref="GI:330829045" /db_xref="GeneID:10487262" /translation="MKHRTFRLGPTLIIILFTVALLPALLASTVLLIRQHQIIAQSEQ SQLERALTSMTREARFRSELIGTQLNQLSQDRVLHQALDNFLFSSHARLALATFVKSN SLLTSAYLIDDKGLVVEYINGQASHLESSNLMPQLMAWGKTREAKQGKHLLLPVNDPV LVDDMEQNRSGGLALVAPIYRNHQRAGVMQTPSGFVMAILPWRQMAQLLEPYLKGSEY LVISQGENRLYEGAHQSANAMDDREPSKMAQPLAIGWPQLEQEITPTITLYSYSNDRV SELNKSQQLLTVSIAVMLLLVAIGCVWLTRWLTRPLRSLATLVRSYGKGNYQQRQAPL RFVEYDEVRQLLQEMASTISDQVRALYQQNEQLQQANSEKEAFNQRLLGFNDELEQEV ASQTTALRSALSREERSRHILQSWLQFGLHQQLDIDIAELASSALLQLSQLYPGHRWG LVIRRDGQPHYSLTQGVDAPLRDALQEKLAQLMDEEVKHSECQWDNALWKIMTLPGSQ SGVLFGYLMVSAEGLESEDRAILRLFAKQLAVGIEGRLFTDELARVARTDNLTGLPNR QAFEEAFHHYQAVLARHPELHLALFMLDLNGLKRTNDQYGHEAGDALLIQMARQLRTL CRQDEKIFRIGGDEFVLLAEADHLASQLLAGRLEASQQHAIVQHGEHSFPLRFAIGWS SSDQTPLAELSRVADDAMYANKARFYQGQR" misc_feature complement(1481725..1481934) /locus_tag="B565_1345" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(1480672..1481124) /locus_tag="B565_1345" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(1480879..1480881,1481008..1481010)) /locus_tag="B565_1345" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(1480876..1480887,1480891..1480893, 1480957..1480959,1480969..1480971,1480981..1480986, 1480993..1480995)) /locus_tag="B565_1345" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(1480822..1480824,1480903..1480905)) /locus_tag="B565_1345" /note="I-site; other site" /db_xref="CDD:143635" gene complement(1482786..1483979) /locus_tag="B565_1346" /db_xref="GeneID:10487263" CDS complement(1482786..1483979) /locus_tag="B565_1346" /codon_start=1 /transl_table=11 /product="maltose/maltodextrin ABC transporter substrate binding periplasmic protein MalE" /protein_id="YP_004391998.1" /db_xref="GI:330829046" /db_xref="GeneID:10487263" /translation="MSRKRYFYHLLLLCLFALSHPLQAQEPELELWHSQQAGYVIDDV IARFNQEGNHRVRVTQIEPGKIKADLLLAAQARGLPDLMLIPSDFIGLYRQMALAPLP AEWFSPSLMASALRYVTLDRQRWGMPMMQGNHLMLFYNKALVSTPVTQWQQLTAITPA LKAKGVYPVSWPYHDMYYFAAFLHTFGGSPVTEGRITLDSPAMVQALEAYRTVASEQW VDPECDYDTALARFNEGKSAYLINGDWAFNDLVKNMGDKLGVALLPRWQSHPMHSMSG AYVLGASRWAMDDEDRQPVIKALMAFIQRQDIQQFIYHQGALLPVNQQAFAAISRRPT PQEKVLLEQFTLSTPMPSDSAMSIAWQAMEKGFERFKEGISAADTARYMQQLADQQYQ QVKAP" misc_feature complement(<1483134..1483907) /locus_tag="B565_1346" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(1484142..1484357) /locus_tag="B565_1347" /db_xref="GeneID:10487264" CDS complement(1484142..1484357) /locus_tag="B565_1347" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004391999.1" /db_xref="GI:330829047" /db_xref="GeneID:10487264" /translation="MFPEYRELISKLKSSDVHFQKKFDLHNDLDAEIRKLEKHHASDY SAEVRDLKKQKLKLKEEIYDILKQHPQ" misc_feature complement(1484154..1484357) /locus_tag="B565_1347" /note="Protein of unknown function (DUF465); Region: DUF465; cl01070" /db_xref="CDD:186318" gene complement(1484634..1485245) /locus_tag="B565_1348" /db_xref="GeneID:10487265" CDS complement(1484634..1485245) /locus_tag="B565_1348" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392000.1" /db_xref="GI:330829048" /db_xref="GeneID:10487265" /translation="MKKIGLLLAAILLSPLAMAQTAPAAPKAQATQTWYVAPIAIDET SDAQKALTKDFMAQMIKTIKINEYQTGKAVGNTKKPKWLIRTKLIPASNEPLVGKKHP QGLTYGKGNPTQEIVGELLMNGTLVAHIGQGWREPIVPGTPVAEKLSIANYRYAIGDQ AKSADLEELAAQIGFEAGKVIHRDGKPLPEKKKKKEQADEEKE" gene complement(1485242..1486603) /locus_tag="B565_1349" /db_xref="GeneID:10487266" CDS complement(1485242..1486603) /locus_tag="B565_1349" /codon_start=1 /transl_table=11 /product="Na+ driven multidrug efflux pump" /protein_id="YP_004392001.1" /db_xref="GI:330829049" /db_xref="GeneID:10487266" /translation="MQSQSHAGPGTLFALTWPLFIDLALHFLTGALNTFMVGHVSYQG VAALAVGNQVFDLAITLFSFVSIGTSVVITQYLGAGDREKSRVVIHTAIGFNLLIGLV AAIGVMAGASTMLALMNLPANLMSDGTLYLQIIGLCLLPEAAALCLAATLRAHGHTRQ AMYVTLIVNLITFVGNLLLLYGWFGLPQLGVAGVAISTVAGRLIGVVLLVWLVARKTG IRLVVRDIVHPSREMLGKVLHIGLPAAGENLSWMLQFMVVTAFVGLLGDKALATQSYF FQICLFILLFGLSIGLGNEIIIGHLAGARQFDRAYQQLLKSLKLGLAVTCVIAVAAAL NGRTIISLFTDDADIITQVAQLFLISLILEPGRTFNLVVINALRATGDARFPLYMALL SMWGIAVPLSYFLGIMQGYGLVGIWLALACDEWVRGLAMFWRWRSRRWQNKILVETKA ESQ" misc_feature complement(1485254..1486573) /locus_tag="B565_1349" /note="Na+-driven multidrug efflux pump [Defense mechanisms]; Region: NorM; COG0534" /db_xref="CDD:30880" misc_feature complement(1486070..1486552) /locus_tag="B565_1349" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" misc_feature complement(1485395..1485877) /locus_tag="B565_1349" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" gene complement(1486725..1488548) /locus_tag="B565_1350" /db_xref="GeneID:10487267" CDS complement(1486725..1488548) /locus_tag="B565_1350" /codon_start=1 /transl_table=11 /product="sulfate permease family protein" /protein_id="YP_004392002.1" /db_xref="GI:330829050" /db_xref="GeneID:10487267" /translation="MRDFFSLERWLPGLAALLHYQRAWLMPDLRAGLSVAAVALPVAI AYAELAGVGAIVGLYSCILPMLIYALFGTSRQLIVGPDAATCAVIAAVVTPLAAGDPT RHWQLVMTMTAMTGFWCLIASRFKLGVLADFLSRPILMGLLNGVAITIMVGQLSKIFG FTFSERYLIERIASGATYITQTHLPTLAMSLVALLTLLLAKRYKPAWPSSMVAMVVTA ALVWGFNLGQFDIATLGTVGSGLPAFQMPEFPPGLMRELVLPALNLAMVSFVSMMLTA RSFAAKNGYEIDADKEFRALGMANLASAVSQGFAISGADSRTAVNDANGGKSQLVSII AAAVIALITFYLTAPLKYIPTAALGVVLVMASLSLTDFRGLWALRHSDRAAFWLALVT FISVLTMGVIPGITLAVLLGLFQFLRNVMRPTDQLLGMDDEGVVRTLGDNEQAKAIPG ILVYRFNSPLTYFNAPYFKRRVLALLVQDPRAPKCLVIDAVACFTHQDISVMSMVGEL HKELKRRGIHMVMAGRHGQMTHWLKQAGVRVGDEGIILCPDMYQALRLTRCYREPVFK DDAVVESTTDAIRSNWPQDDALPDSARLTLPSEQEAGATPA" misc_feature complement(1486887..1488524) /locus_tag="B565_1350" /note="Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]; Region: SUL1; COG0659" /db_xref="CDD:31004" misc_feature complement(1487385..1488176) /locus_tag="B565_1350" /note="Sulfate transporter family; Region: Sulfate_transp; cl00967" /db_xref="CDD:193990" misc_feature complement(1486938..1487222) /locus_tag="B565_1350" /note="Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function; Region: STAS_SulP_like_sulfate_transporter; cd07042" /db_xref="CDD:132913" gene complement(1488620..1489210) /locus_tag="B565_1351" /db_xref="GeneID:10487268" CDS complement(1488620..1489210) /locus_tag="B565_1351" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392003.1" /db_xref="GI:330829051" /db_xref="GeneID:10487268" /translation="MPTTEPLNSALEQQFQAKTEALLRADPQRMACLQAAAELNLPDW ALGAGFIRNLIWDHLHHKAVPTPLNDIDLIYLDKSDPQGLAEAAHEAWLAKRLPDQQW EVRNQARMHTRQLVTPFANSLEALSHWVEVPTCIGVRLTRDGEFEWLAPYGFTINWSL QVSANPRCRQDKQIFTQRIKEKRWQAIWPDLQVNWP" misc_feature complement(1488626..1489114) /locus_tag="B565_1351" /note="Bacterial protein of unknown function (DUF925); Region: DUF925; cl01435" /db_xref="CDD:194134" gene complement(1489197..1489457) /locus_tag="B565_1352" /db_xref="GeneID:10487269" CDS complement(1489197..1489457) /locus_tag="B565_1352" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392004.1" /db_xref="GI:330829052" /db_xref="GeneID:10487269" /translation="MSDIIHQANQQQFICMVEGKESRLRYRRLDAKTIDAYSTFVPPE LRVQGIADQLARAFFNWTQAEGLTIVPSCRYIDVWLRRNANN" misc_feature complement(1489209..1489445) /locus_tag="B565_1352" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(1489661..1490845) /locus_tag="B565_1353" /db_xref="GeneID:10487270" CDS complement(1489661..1490845) /locus_tag="B565_1353" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase IV" /protein_id="YP_004392005.1" /db_xref="GI:330829053" /db_xref="GeneID:10487270" /translation="MSRYYDFFCPVKLLAGEQALEQLASELASLGARSPLLLTDKGVN ATGLATLLANVLAEGELPVAAIWDEIPADSSTAVVERIAKRYRELDCDSLVALGGGSV IDTAKAVNILTSMGGDHLLDYSGAGCLTRPLKPLAVVPTTAGTGSEVTLVAVIKDEAS GRKVPFTSPFLLPQLAVLDPRLTQGLPLNITAATAMDAMTHAIESFIGTAKNPVSDAL ALMAVEKIASALPQIIHDPQNKQLRLQLAEGSTLAGMAFSNSMVGLVHALGHSLGARC HLPHGLCMNLFLPTVLDYNRPEVDSELARLLLPLVGAERFAATPAHQRAEATITAIRT LRDTLWQAVKLPRTMSEAGVSDRSLLTEIRDLAVNDGALLFNRKDADREQLLTLLERA WA" misc_feature complement(1489667..1490749) /locus_tag="B565_1353" /note="Alcohol dehydrogenase, class IV [Energy production and conversion]; Region: EutG; COG1454" /db_xref="CDD:31643" misc_feature complement(1489679..1490749) /locus_tag="B565_1353" /note="Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH); Region: DHQ_Fe-ADH; cl02872" /db_xref="CDD:186536" misc_feature complement(order(1490006..1490008,1490036..1490038, 1490048..1490050,1490243..1490245,1490255..1490257, 1490276..1490278,1490300..1490302,1490354..1490359, 1490414..1490416,1490420..1490425,1490525..1490527, 1490534..1490536,1490543..1490551,1490726..1490728)) /locus_tag="B565_1353" /note="active site" /db_xref="CDD:173927" misc_feature complement(order(1490006..1490008,1490300..1490302, 1490414..1490416,1490420..1490425,1490543..1490551, 1490726..1490728)) /locus_tag="B565_1353" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:173927" misc_feature complement(order(1490006..1490008,1490048..1490050, 1490255..1490257)) /locus_tag="B565_1353" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173927" gene complement(1490864..1491382) /locus_tag="B565_1354" /db_xref="GeneID:10487271" CDS complement(1490864..1491382) /locus_tag="B565_1354" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392006.1" /db_xref="GI:330829054" /db_xref="GeneID:10487271" /translation="MTTPTVESLAALGRRLWITTLLWVVGRTLCRAARTDEAVRRELA PLPDGLAIRLEVGGIGYAMNMHKQGGRWYPGAPAAPHATIHPLRVRFKHPNIAFRALS FRLGVNQAFGENRLLVEGDLTVAMHLVRGLEQLQSLILPAFIARPLLRHYPAPTNKIS RACNIYLGLVTG" gene complement(1491363..1491983) /locus_tag="B565_1355" /db_xref="GeneID:10487272" CDS complement(1491363..1491983) /locus_tag="B565_1355" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_004392007.1" /db_xref="GI:330829055" /db_xref="GeneID:10487272" /translation="MNQAIPQPQNMTDKRRQILDAALALCAEDGLQGAATARIAKAAG VANGTLFHHFPSKEALILALYQDVKTRMGSAIHEADPTLPLYDQTRHYWQLAMEWMQA NPNELKFVLGFFHSPLLARPARSQILNDALRFLPALLAKGQASGELMQAPAPLLLEVC QGQFLACASLFVDQPELGEDDYWQASAFALFWSAISGANPYDNSDC" misc_feature complement(1491414..1491968) /locus_tag="B565_1355" /note="Transcriptional regulator [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:31500" misc_feature complement(1491792..1491932) /locus_tag="B565_1355" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene complement(1491995..1493440) /locus_tag="B565_1356" /db_xref="GeneID:10487273" CDS complement(1491995..1493440) /locus_tag="B565_1356" /codon_start=1 /transl_table=11 /product="Coniferyl aldehyde dehydrogenase" /protein_id="YP_004392008.1" /db_xref="GI:330829056" /db_xref="GeneID:10487273" /translation="MGAAQLQHTPEDILAIKLSLPDQLARLKRASLAHPMPTLAERRA QLTKLKQALLAHKGQLCKALAADYGQRSHYDSLIADVLPCIMQINYTQKRLKRWMQPH RRHTGLLLAPAKVEVHFQPLGVVGIIVPWNFPVMLSLGPLITAIAAGNRAMLKLSEFT PHTNAVLRTMLTSVFDENEIAIIEGDAQMAAAFSSLPFDHLLFTGSTMVGKLVMAAAA PQLTPLTLELGGKSPCLIAPDMPVATAVERMIFGKSLNAGQICVAPDYVLLPRSEVDN FIAAYRRHFSKLYPQGLNSADYGAIINDRQYQRLVSWLDEAEQAGAQLHPCGNPARDD QRRLLVPHLLTGVPGQCQVMQQEIFGPLLPLIPYDTLEEALAYVAERPRPLALYLMSF DPELQARVTRETHSGGMAINESLFQVAADDVPFGGIGASGMGHYHGHEGFLTFSKAKT VLTRGKFTTGSLIHPPYNSWIQKLMMAFFLR" misc_feature complement(1492082..1493377) /locus_tag="B565_1356" /note="Coniferyl aldehyde dehydrogenase-like; Region: ALDH_CALDH_CalB; cd07133" /db_xref="CDD:143451" misc_feature complement(order(1492364..1492366,1492370..1492372, 1492514..1492516,1492523..1492528,1492532..1492534, 1492826..1492828,1492880..1492882,1492967..1492969, 1493045..1493053)) /locus_tag="B565_1356" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143451" misc_feature complement(order(1492658..1492660,1492667..1492669, 1492760..1492762,1493045..1493047)) /locus_tag="B565_1356" /note="catalytic residues [active]" /db_xref="CDD:143451" gene 1493674..1493946 /locus_tag="B565_1357" /db_xref="GeneID:10487274" CDS 1493674..1493946 /locus_tag="B565_1357" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392009.1" /db_xref="GI:330829057" /db_xref="GeneID:10487274" /translation="MLARLEDVVERMPDCFNTYEFAQKLALQYQPEFFAAGHSLAEHE GKVLRVLHQKIAEALAGSEMVIEGALLPCVTPWGEKATSPRWHRKH" gene 1494169..1495137 /locus_tag="B565_1358" /db_xref="GeneID:10487275" CDS 1494169..1495137 /locus_tag="B565_1358" /codon_start=1 /transl_table=11 /product="Inosine-uridine preferring nucleoside hydrolase superfamily protein" /protein_id="YP_004392010.1" /db_xref="GI:330829058" /db_xref="GeneID:10487275" /translation="MNHKIILDTDPGIDDAMAILFAEAHPAIELLAITTVFGNATIAN GTRNALWLKQKYGMKADVAKGAAAPLLREPVGPTTIVHGPSGFGDMEAGEVTIAPDPR PAWQYIVEAVKAAPGEITLVTIGPLTNLALALQQAPEIVSQVKQVVVMGGAFGVNGHR GNVTPYAEANIHDDPDAADRVFTADWPVVIIGLDVTQQSFFSSVYLDELRDKAGEPGR FLWDVSRFYLRFYSEKLGLSGCHVHDPSAIAYVIDPTLFTLREGPVRVITSGPAIGHT LQKFDGKRHSHDDWAAYRPQQVGVAVRDEALLALYRETLVGWGKDC" misc_feature 1494178..1495074 /locus_tag="B565_1358" /note="NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB). Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base...; Region: nuc_hydro_CaPnhB; cd02650" /db_xref="CDD:29578" misc_feature order(1494196..1494198,1494208..1494213,1494283..1494285, 1494538..1494540,1494652..1494654,1494670..1494672, 1494676..1494678,1494898..1494900) /locus_tag="B565_1358" /note="active site" /db_xref="CDD:29578" gene 1495244..1495579 /locus_tag="B565_1359" /db_xref="GeneID:10487276" CDS 1495244..1495579 /locus_tag="B565_1359" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392011.1" /db_xref="GI:330829059" /db_xref="GeneID:10487276" /translation="MAWISLIVAIALIWWLMKLGRGALFEIRLAPGKVVVKQGKVSPA FIEHAKQILRHDTVRGRIVGQRDGDGVKLIFSRSIPEPVAQRFRNIFPYGDYRQPTAP LPGPKSRKG" misc_feature 1495247..1495537 /locus_tag="B565_1359" /note="Protein of unknown function (DUF3634); Region: DUF3634; pfam12321" /db_xref="CDD:152756" gene complement(1495668..1496873) /locus_tag="B565_1360" /db_xref="GeneID:10487277" CDS complement(1495668..1496873) /locus_tag="B565_1360" /codon_start=1 /transl_table=11 /product="cytochrome c, class I" /protein_id="YP_004392012.1" /db_xref="GI:330829060" /db_xref="GeneID:10487277" /translation="MNRALSLTASALLLALPALAANAAPAMSAGEYVAKLGDCAACHT SETSKPLAGGKGFPTPIGTVFATNITPDKTHGIGNYSLPEFIKVMREGVARDGHRLYP AMPYTAYAKMNDKDLEDLYHYLMKEVQPLAIANKESDIPWPLNMRWPLMGWNWVYHDD SRFTPVAGKSEEWNRGAYLVQGAGHCGSCHTPRGLGMQEKALTEADPVYLSGAALDGW YAPDIRGSRYSKQALIDLLKTGRSQHEAVAGPMGEVITHSSQYFSDADLASIATYLTD LKDEPVAEKGARAYASASGKADYAMYCSTCHGVNGQGNDHVIPSLVNNRTVLASDPSS LINVLLHGAETPVTHGHLGYHMPGYGWTMDDERLAELVNTLRASWGNEGTAVKAAAVK AQRELHGKE" misc_feature complement(1496043..1496564) /locus_tag="B565_1360" /note="Cytochrome c, mono- and diheme variants [Energy production and conversion]; Region: CccA; COG2010" /db_xref="CDD:32193" misc_feature complement(1495755..1495997) /locus_tag="B565_1360" /note="Cytochrome c; Region: Cytochrom_C; cl11414" /db_xref="CDD:196222" gene complement(1496870..1498795) /locus_tag="B565_1361" /db_xref="GeneID:10487278" CDS complement(1496870..1498795) /locus_tag="B565_1361" /codon_start=1 /transl_table=11 /product="twin-arginine translocation pathway signal protein" /protein_id="YP_004392013.1" /db_xref="GI:330829061" /db_xref="GeneID:10487278" /translation="MSITRRDFLNGVAITIAAGVAPINLLKAAEGGSALADKTLAYPP ALTGLRGNHPGSFEPAHSIARDGKQYDFANIPLEGEYDLVIVGAGISGLAAACFYQQL LGADKKILLLDNHDDFGGHAKRNEFTTPDGLRLGYGGSESLQSPRSVYSPVALGLLKA LEVNIDELAAGFQQTFYPDLGLSRGVYFDEKHFGVNKIVNGDPGHNVADDIPRDRLNG RPLAEFIGDFPLDDADKAALLALHEAKIDYLSGMTREQQDEWVTRNSYTTFLRDKVGL SERAITYFQQRTNDFQAVGIDATACADARLCALPGFDGLNLTPLDAEEQAELDDPYIF HFPDGNAGLTRLMVRKLIPQVAPGHTMQDVVLAKFDYGKLDLPEHKVQLRLGSTALQA KNVRLADGKLVVDVTYIKEGKLHRVRAKQSIMAGYNMMIPYMVPEMPEPQKEALRQNA KAPLVYTKVVIKNWQAFVKLGVHEVYSPAAPYSRVKLDYPVSMGGYEHPKSPDQPMCL HMVYVPTLPGSGLSAREQSRKGRAMILGMPFEQHEQMIREQLQGMLGSAGFNHEQDIL SITVNRWSHGYSYVTNTLFDDEAQCEKWIELGRQPIGNITIANSDAGWSPYAHAAIDE AWRAVNELVAMSKGGAQ" misc_feature complement(<1498430..1498558) /locus_tag="B565_1361" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(<1498262..1498546) /locus_tag="B565_1361" /note="Protoporphyrinogen oxidase [Coenzyme metabolism]; Region: HemY; COG1232" /db_xref="CDD:31425" gene 1499161..1499535 /locus_tag="B565_1362" /db_xref="GeneID:10487279" CDS 1499161..1499535 /locus_tag="B565_1362" /codon_start=1 /transl_table=11 /product="aminopeptidase C" /protein_id="YP_004392014.1" /db_xref="GI:330829062" /db_xref="GeneID:10487279" /translation="MNWYISVLKQYAVFSGRARRTEYWMFVLCNVIVMLLLSMVDKLI GGDNELISSIYSLAVLLPSLAVAARRLHDTDRSAWWLLLGLIPIIGTLVLIYFMVCNG QQGPNRFGDDPKAAPSQGFIVS" misc_feature 1499188..1499505 /locus_tag="B565_1362" /note="Protein of unknown function (DUF805); Region: DUF805; cl01224" /db_xref="CDD:194070" gene complement(1499618..1500721) /locus_tag="B565_1363" /db_xref="GeneID:10487280" CDS complement(1499618..1500721) /locus_tag="B565_1363" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="YP_004392015.1" /db_xref="GI:330829063" /db_xref="GeneID:10487280" /translation="MKQTLLALTLGGLLALSPLALQAAESSMQIEHDLNTLVSKRQAV DMLLGEALQIYKSPAKISHAGFTAKMPSNMELVTERLLAAYQLEPYRTDLLISAANAQ IYNGNLSRAITLLEQAQAVAPDDLDINSYLAIWQLVKGNKEASRSYLAKVADRNGGRA ADLEEIIARVQRITAAPLQTELTEDQVKATQEGKRAIVTLGYALNPDGSMDKILLGRL QTTLELAKADPEALIILTGGVPQNRKTEGKLMADWLANHGIDRSRLIEENYATSTVDN ALYSAYALARHQIDYAVLVSSASHVRRGQTVLEIACDQIGPANIKVASVSYPDKPLEE LATPSESELLGIYRDALRTYGMWSYRSAPLIER" misc_feature complement(1499660..1500136) /locus_tag="B565_1363" /note="YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been...; Region: YdcF-like; cd06259" /db_xref="CDD:99750" misc_feature complement(order(1499663..1499665,1499813..1499815, 1499822..1499824,1499834..1499836,1499894..1499896, 1499903..1499905)) /locus_tag="B565_1363" /note="putative active site [active]" /db_xref="CDD:99750" gene complement(1501047..1501799) /locus_tag="B565_1364" /db_xref="GeneID:10487281" CDS complement(1501047..1501799) /locus_tag="B565_1364" /codon_start=1 /transl_table=11 /product="minor nuclease C1B isoform" /protein_id="YP_004392016.1" /db_xref="GI:330829064" /db_xref="GeneID:10487281" /translation="MIKINKLVLAVTLTLTATPLLAAHWECGEHVRFGLPSESDQKLC REGYAVGYNYDYKVADWVSYRMTAQSAQGTVPRKDAFAEDREIPVAYRATLSDYKGSG YDRGHQAPAGDMKSNKNTMKESFLLSNMTPQIGVLNQKAWRVLEDKVNKWAVSRKDVQ VITGPIFTGSEESIGQGVAIPSAYYKIVMDPARLQAIAFIMPQEEVPISQIADYRVSV REVEEQTQLNFFSDMPEEQQETLEARVSPMWN" misc_feature complement(1501065..1501673) /locus_tag="B565_1364" /note="DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers; Region: NUC; cd00091" /db_xref="CDD:28975" misc_feature complement(order(1501350..1501352,1501362..1501364, 1501386..1501388,1501479..1501481,1501485..1501490)) /locus_tag="B565_1364" /note="active site" /db_xref="CDD:28975" misc_feature complement(order(1501350..1501352,1501485..1501490)) /locus_tag="B565_1364" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:28975" misc_feature complement(1501386..1501388) /locus_tag="B565_1364" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28975" gene complement(1502033..1503925) /locus_tag="B565_1365" /db_xref="GeneID:10487282" CDS complement(1502033..1503925) /locus_tag="B565_1365" /codon_start=1 /transl_table=11 /product="phosphotransferase system fructose-specific" /protein_id="YP_004392017.1" /db_xref="GI:330829065" /db_xref="GeneID:10487282" /translation="MLPTMTNGRLICLELKATSKEALFDEMAQMLARDGAVSDQQQFV KDIWAREQLDCTGFEQGVALPHAKSKAVSRPAIAIGVSRQGIEYGAEDGKPTQLIFMI ASPDGGANHHIEVLAELSTRLLEPGFIEQMKAATTVEQALTLLKQGPKAEKPAPAAKP AATAPAAPEERTFKDRLNTMKQHLLFGTSHMIPFIVAGGVLLSLSVMMSGKGAVPEAG FLKDMATMGIAGLTLFTAVLGGYIAYSLADKPGLAPGMIGSWIAVQHYQTGFLGAILV GFIAGFVVNQLKRIKLPDSMTSLGSIFIYPLIGTFLVCGIVMWGIGAPIAAMMEGMNH WLSSMAGSGKVMLGAILGGMTAFDMGGPVNKVATLFAQTQVNTQPWLMGGVGIAICVP PLGMALATFMSPKRYKKEERESGKAAAIMGMIGISEGAIPFAAADPMRVIPAIVAGGI VGNITGFMMHSINHAPWGGWIVLPVVEGKMGYILGTILGALTTAIIVNLLKKPVSEED DVTTTQTSFEIIEAEGEADVLAITACPSGVAHTFLAAKSLQKAAAKQGIKIKVETQGA NGIINRITAKDVANARCVIFAHDVAIKNRERFTNIEVIDVKTKEAIHNPEALLARTLG NKANAA" misc_feature complement(1503491..1503898) /locus_tag="B565_1365" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cd00211" /db_xref="CDD:29266" misc_feature complement(order(1503728..1503730,1503776..1503778)) /locus_tag="B565_1365" /note="active site" /db_xref="CDD:29266" misc_feature complement(1503728..1503730) /locus_tag="B565_1365" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29266" misc_feature complement(1502384..1503397) /locus_tag="B565_1365" /note="Phosphotransferase system, EIIC; Region: PTS_EIIC; cl00557" /db_xref="CDD:186079" misc_feature complement(1502057..1502344) /locus_tag="B565_1365" /note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII (also referred to as FruAB) is a fructose-specific permease made up of two proteins (FruA...; Region: PTS_IIB_fructose; cd05569" /db_xref="CDD:99911" misc_feature complement(order(1502303..1502311,1502315..1502326)) /locus_tag="B565_1365" /note="P-loop; other site" /db_xref="CDD:99911" misc_feature complement(order(1502303..1502308,1502315..1502320, 1502324..1502326)) /locus_tag="B565_1365" /note="active site" /db_xref="CDD:99911" misc_feature complement(1502324..1502326) /locus_tag="B565_1365" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99911" gene complement(1504449..1506089) /locus_tag="B565_1366" /db_xref="GeneID:10487283" CDS complement(1504449..1506089) /locus_tag="B565_1366" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004392018.1" /db_xref="GI:330829066" /db_xref="GeneID:10487283" /translation="MLTKMTIGQKLTMAFTTLALLMLGFAWFATLQLSNIYRDASEVS DNIVPSIRASSQMHVSLLDARRAELNMVIDALGKDPDSLNSSTQSFEAAKSQYMAAEQ RYGSMPFVSERDRNMFAELKTAAAKYFSAHGDLETAIRQGDIAKVQSLIKNESRAALE QAGQDGLELRKENDRVANLLTKQSEASYERAKLLSTTVGALTLLFVVIVAWLLIRQIR NPVMTLLEQTRQVAAGNLTSQLDMKQFSHDELGKLAQGFNEMQSNLRMLVNEVSGSVV QLGAAAEEISAVAQQSANNMGAQQHELNQLATAMNEMQATVQEVARNTNDAASAATSA SDTAAQGSETVNDSIGRIEKVATAIEETALVIRQLGDDSRNIGMVLEVIQGIAEQTNL LALNAAIEAARAGEQGRGFAVVADEVRTLAKRTQDSTSQINHIISELQQRANEAGVTM QQSQDMMSETVHTAREAGASIAEISSSVNSISHMNIQIATATEEQGAVSEELNRNVVN ISNASEEVATGAKQMAQACNDLNLLATQLQEVVRKFRT" misc_feature complement(1505526..1505999) /locus_tag="B565_1366" /note="Four helix bundle sensory module for signal transduction; Region: 4HB_MCP_2; pfam12729" /db_xref="CDD:193205" misc_feature complement(<1505136..>1505570) /locus_tag="B565_1366" /note="Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms]; Region: NarQ; COG3850" /db_xref="CDD:33640" misc_feature complement(1505295..1505501) /locus_tag="B565_1366" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(1504455..1505240) /locus_tag="B565_1366" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(1504455..1505033) /locus_tag="B565_1366" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1506954..1508153) /locus_tag="B565_1367" /db_xref="GeneID:10487284" CDS complement(1506954..1508153) /locus_tag="B565_1367" /codon_start=1 /transl_table=11 /product="mannose-6-phosphate isomerase" /protein_id="YP_004392019.1" /db_xref="GI:330829067" /db_xref="GeneID:10487284" /translation="MSSSDLPSFLLMQNPIQGYDWGSHDSLTTLFGIPNPQGKPQAEL WMGAHPNGCSEVTLAGSVQKLSSVIDRAPAAALGEATFARFGSLPFLFKVLCAEKALS IQVHPSKAQAEAGFAKEEAAGIDIKASNRNYKDPNHKPELVFALTPYQAMNGFRAIPA ILALFERVNLAAIADLTAALAASQNEAGLQHFFHQLLVLEGARKEEALEGLLDYAAAH QDEETFALITSLAAQYPGDVGLFSPLLLNVVTLEPGQAMFLDACTPHAYVRGTGLEIM ANSDNVLRAGLTPKYIDVAELLDCTRCLPKPDDQILLAPRCDGAVQHFDVPVPDFTFS VYPAGEHQLTTASAEILFAIDDTVTLKQGEQSLRLEKGQSAFISAATGSYQLLAEGRV ARAGNRC" misc_feature complement(1506963..1508120) /locus_tag="B565_1367" /note="mannose-6-phosphate isomerase; Provisional; Region: PRK15131; cl14659" /db_xref="CDD:189265" misc_feature complement(1507059..1508120) /locus_tag="B565_1367" /note="Phosphomannose isomerase type I; Region: PMI_typeI; pfam01238" /db_xref="CDD:110253" gene 1508273..1509148 /locus_tag="B565_1368" /db_xref="GeneID:10487285" CDS 1508273..1509148 /locus_tag="B565_1368" /codon_start=1 /transl_table=11 /product="putative HTH-type transcriptional regulator YijO" /protein_id="YP_004392020.1" /db_xref="GI:330829068" /db_xref="GeneID:10487285" /translation="MSLIFSQLLDGALIEQVPFDQIWFASEQGVPPSFSYQVNFPRLE LVFSGEYLNQIWDRDEGVREISVLPGQALYIPPNGWNKPLWTTDCSVLSLLFGKRQLG FSLVSKRREDPDFFDVQKHSIMARAGHVIEHILAALNVLTEDPGRSPTDDHLLQALLA SARQLLLESATDRPRGAELFHGICIYIQENFHRPITRDSIAHRFNVSASHLSHLFREQ GHMRLADYISWVRIDRAKFMLKKYRFRLEEVASRCGYSDVNYFCRVFKQKTGLTPSQY RSLSQPQAAASELEG" misc_feature 1508852..1509103 /locus_tag="B565_1368" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:128636" misc_feature 1508999..1509103 /locus_tag="B565_1368" /note="Bacterial regulatory helix-turn-helix proteins, AraC family; Region: HTH_AraC; pfam00165" /db_xref="CDD:143933" gene 1509305..1510558 /locus_tag="B565_1369" /db_xref="GeneID:10487286" CDS 1509305..1510558 /locus_tag="B565_1369" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase" /protein_id="YP_004392021.1" /db_xref="GI:330829069" /db_xref="GeneID:10487286" /translation="MESKVVIPTQGQKITVDANGKLQVPNHPIIPFIEGDGIGVDVTP AMLNVVNAAVEKAYKGERKIAWMEIYTGEKSTHVYGEGAWLPAETLDFIREYCVAIKG PLTTPVGGGIRSLNVALRQELDLYICLRPVRYYDGTPSPVKRPDLTDMVIFRENAEDI YAGIEWKADSAEANKVIAFLQNEMGVKKIRFPESCGIGIKPMSKAGTERLVRAAIEYA IDNDRDSVTLVHKGNIMKFTEGAFKDWGYALAQNEYGAQLIDGGPWCSFKNPKTGKTI VIKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDGVA LFEATHGTAPKYAGQDKVNPGSLILSAEMMLRHMGWVEAADLIIKGMEAAIRNKTVTY DFERLMEGATLRSCSQFAQDMIDQM" misc_feature 1509305..1510549 /locus_tag="B565_1369" /note="isocitrate dehydrogenase; Validated; Region: PRK07362" /db_xref="CDD:180944" misc_feature 1509326..1510555 /locus_tag="B565_1369" /note="Isocitrate/isopropylmalate dehydrogenase; Region: Iso_dh; cl00445" /db_xref="CDD:193821" gene complement(1510631..1510807) /locus_tag="B565_1370" /db_xref="GeneID:10487287" CDS complement(1510631..1510807) /locus_tag="B565_1370" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392022.1" /db_xref="GI:330829070" /db_xref="GeneID:10487287" /translation="MKQYQSWLGDYLMSRRDGDHAMASELANTICAFWKAQGDEAETS KWQQRYQQHVEQAQ" gene complement(1511116..1512447) /locus_tag="B565_1371" /db_xref="GeneID:10487288" CDS complement(1511116..1512447) /locus_tag="B565_1371" /codon_start=1 /transl_table=11 /product="D-serine deaminase" /protein_id="YP_004392023.1" /db_xref="GI:330829071" /db_xref="GeneID:10487288" /translation="MKNIDVQQLTAQFPLVQSLIALEPVTWFNPNTTTLAAGLPYVGL DNNNVADASARLARFAPYMCEAFPETRTSNGILESEIAAIPAMQATLNQRYGVEVTGR LLLKKDSHLPISGSIKARGGIYEVLAHAEQLAIKAGLLCEEDDYRKLFTDEFRQFFSQ YSIAVGSTGNLGMSIGIMSAKLGFTVTVHMSADAREWKKRKLREHGAIVVEYAEDYGV AVEQGRKEAERDPNCFFIDDENSRTLFLGYSVAGERVKKQFDEMGIKVDADHPLFVYL PCGVGGGPGGVAFGLKLAFGDHVHCLFAEPTHSPCMLLGIHTGLHDAIAVQDLGIDNL TAADGLAVGRASGFVGRAMERLLDGFYTLSDQEMYDLLGLLARDEQITLEPSALAGMV GPWRVAANPEWLTGRGCDAATMAQATHLVWATGGGMVPAEEMEKYLASAKI" misc_feature complement(1511158..1512375) /locus_tag="B565_1371" /note="D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive...; Region: D-Ser-dehyd; cd06447" /db_xref="CDD:107208" misc_feature complement(order(1511173..1511178,1511290..1511292, 1511599..1511613,1511938..1511940,1512094..1512099)) /locus_tag="B565_1371" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:107208" misc_feature complement(1512094..1512096) /locus_tag="B565_1371" /note="catalytic residue [active]" /db_xref="CDD:107208" gene complement(1512464..1513801) /locus_tag="B565_1372" /db_xref="GeneID:10487289" CDS complement(1512464..1513801) /locus_tag="B565_1372" /codon_start=1 /transl_table=11 /product="Permease DsdX" /protein_id="YP_004392024.1" /db_xref="GI:330829072" /db_xref="GeneID:10487289" /translation="MSSEVWVIATLLSSIVLIVVTIVKGKVHPFLALLLASFYVGTLM GMEPLKMVSTMEAGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLALQRCRWLSPD VIMVLVGLVCGITLFVEVGVVLLIPLAFSIARKTRTSLLTLAIPLCTALMAVHCIVPP HPAALYVTNQLGADIGSVIVYGLAVGLFASLVGGPLFLKLLGNRLPFKEVPAAFADIK ARDEATLPTLGASLFTVLLPILLMLAKTVAELNMEHASHLYTLLEFIGNPITAMFIAA FTAYYVLGIRQQMKMEGLLNKTEECFSSIANILLIIGAGGAFNGVLKASGLGDSLATI LSQLDMHPILLAWLVAIVLHAAVGSATVAMMGATAIVSPIMVHYPNISPEIMTLAIGS GAIGCTMVTDSLFWLVKQYCGATLNETLKYYTTATFVASLMALAGTFLLSFIV" misc_feature complement(1512467..1513801) /locus_tag="B565_1372" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature complement(1512467..1513732) /locus_tag="B565_1372" /note="gluconate transporter; Region: gntP; TIGR00791" /db_xref="CDD:129873" gene 1514025..1514969 /locus_tag="B565_1373" /db_xref="GeneID:10487290" CDS 1514025..1514969 /locus_tag="B565_1373" /codon_start=1 /transl_table=11 /product="D-serine dehydratase transcriptional activator DsdC" /protein_id="YP_004392025.1" /db_xref="GI:330829073" /db_xref="GeneID:10487290" /translation="MYNGDNYISRNKLLSGYQLAKLHTFEAAARHGSFAMAADELSLS PSAVSHRISALEEELGFKLFERFHRKVVLTADGQRVFWALKSSLEFINQEILEIKNQE LSGTLTIYSRPSIAQCWLVPRLADFSRLHPQIELNIITGNENINLHGYGIDLTLYFDE KSPERLAIHPLMDEFMLPVCSPEYAEQHGLVGNPANLSLCRLLHDRQAWGFDSDTDEW SCWARHAGVSLEACQLSMGFDRSDLAIIAAMNHAGIAMGRKNLVSKRLARNELVAPFA GLEVKCEQRYYMATLPNRECPKIQAFIDWAQGMAAEME" misc_feature 1514037..1514960 /locus_tag="B565_1373" /note="DNA-binding transcriptional regulator DsdC; Provisional; Region: PRK10086" /db_xref="CDD:182231" misc_feature 1514079..1514258 /locus_tag="B565_1373" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 1514340..1514939 /locus_tag="B565_1373" /note="HvR and beta-lactamase regulators, and that of other closely related homologs; contains the type 2 periplasmic binding fold; Region: PBP2_GcdR_TrpI_HvrB_AmpR_like; cd08432" /db_xref="CDD:176123" misc_feature order(1514340..1514363,1514367..1514420,1514424..1514444) /locus_tag="B565_1373" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176123" misc_feature order(1514358..1514363,1514367..1514369,1514739..1514747, 1514805..1514807) /locus_tag="B565_1373" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176123" gene complement(1515134..1515310) /locus_tag="B565_1374" /db_xref="GeneID:10487291" CDS complement(1515134..1515310) /locus_tag="B565_1374" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392026.1" /db_xref="GI:330829074" /db_xref="GeneID:10487291" /translation="MKQYQSWLGQYLMSRRDGDHAMACEMASSICEFWQQQGDENELD KWQQIYQNHLEKTT" gene complement(1515622..1516071) /locus_tag="B565_1375" /db_xref="GeneID:10487292" CDS complement(1515622..1516071) /locus_tag="B565_1375" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="YP_004392027.1" /db_xref="GI:330829075" /db_xref="GeneID:10487292" /translation="MYRKLLLSLLTLLLAACSSTPEPPPAPRQSSAFDGFYQQWRGVP YRMGGASRAGLDCSAFTQLAYSQVLGFNLPRTTESQASIGKPVDRYRLQHGDLVFFKT GWQQYHVGVYTGAGEFIHASTSKGVIRSRLDNVYWNSRYWQARRVTQ" misc_feature complement(1515634..1515948) /locus_tag="B565_1375" /note="NlpC/P60 family; Region: NLPC_P60; cl11438" /db_xref="CDD:196233" gene complement(1516266..1517174) /locus_tag="B565_1376" /db_xref="GeneID:10487293" CDS complement(1516266..1517174) /locus_tag="B565_1376" /codon_start=1 /transl_table=11 /product="hydrogen peroxide-inducible genes activator" /protein_id="YP_004392028.1" /db_xref="GI:330829076" /db_xref="GeneID:10487293" /translation="MQRWPSLKQLQYLVALDEHKNFNRAAKACHVSQSTLSTGIQTLE DMMNLQLVERDHKSFIMTPVGMEIVERARNLLSDARDLMELGQHQGGVMQGTVRLGCI PTIAPFLLSKLLKECSKTYPDLELLLREDTTSNLLKQLEQGQLDLLILALPIEIGGFH CKTVGQDPFHMVMPASMAAGLHTPFDYKELPNQSIFLLEREHCLTEHAVSACRLRDKS KINPFAATSLHTLVQMVEAGLGTTFLPQMAIDAGILANSDLVAIPLPGETSYREIGLV WRPSTTRVQTFYKLAELLKPLISHNE" misc_feature complement(1516290..1517156) /locus_tag="B565_1376" /note="DNA-binding transcriptional regulator OxyR; Provisional; Region: PRK11151" /db_xref="CDD:182999" misc_feature complement(1516980..1517156) /locus_tag="B565_1376" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(1516293..1516892) /locus_tag="B565_1376" /note="The C-terminal substrate-binding domain of the LysR-type transcriptional regulator OxyR, a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_OxyR; cd08411" /db_xref="CDD:176103" misc_feature complement(order(1516464..1516469,1516473..1516478, 1516485..1516487,1516494..1516499,1516506..1516508, 1516785..1516799,1516821..1516823,1516833..1516835, 1516842..1516847,1516854..1516856)) /locus_tag="B565_1376" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176103" gene 1517321..1517923 /locus_tag="B565_1377" /db_xref="GeneID:10487294" CDS 1517321..1517923 /locus_tag="B565_1377" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase subunit C-like protein" /protein_id="YP_004392029.1" /db_xref="GI:330829077" /db_xref="GeneID:10487294" /translation="MVLVGRPAPDFTAAAVLGNGEIVDSFNLSSHIKGKAAVVFFYPL DFTFVCPSELIAFDHRYEEFQKRGVEVIGVSIDSQFSHNAWRNTKVEDGGIGQVKYPL IADVKHEICKAYDVEHPEAGVAFRGSFLIDKNGVVRHQVVNDLPLGRNIDEMLRMVDA LQFHEEHGEVCPAQWEKGKKGMQASPDGVAKYLSENADSL" misc_feature 1517321..1517920 /locus_tag="B565_1377" /note="peroxidase; Provisional; Region: PRK15000" /db_xref="CDD:184962" misc_feature 1517330..1517854 /locus_tag="B565_1377" /note="Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic...; Region: PRX_Typ2cys; cd03015" /db_xref="CDD:48564" misc_feature order(1517330..1517332,1517462..1517467,1517474..1517476, 1517663..1517665,1517693..1517695,1517732..1517740, 1517744..1517752,1517762..1517767,1517786..1517788, 1517831..1517842) /locus_tag="B565_1377" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48564" misc_feature order(1517456..1517458,1517558..1517563,1517636..1517638, 1517642..1517644,1517678..1517680) /locus_tag="B565_1377" /note="decamer (pentamer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:48564" misc_feature order(1517459..1517461,1517468..1517470,1517696..1517698) /locus_tag="B565_1377" /note="catalytic triad [active]" /db_xref="CDD:48564" misc_feature order(1517468..1517470,1517831..1517833) /locus_tag="B565_1377" /note="peroxidatic and resolving cysteines [active]" /db_xref="CDD:48564" gene complement(1518218..1519183) /locus_tag="B565_1378" /db_xref="GeneID:10487295" CDS complement(1518218..1519183) /locus_tag="B565_1378" /codon_start=1 /transl_table=11 /product="putative alpha-L-glutamate ligase" /protein_id="YP_004392030.1" /db_xref="GI:330829078" /db_xref="GeneID:10487295" /translation="MWFWEKYTTPWSLSQSGILGMNKRNHSYISRYNPRSLYPLVDDK LQTKQIALDAGVTVPELIGTIRAQHDVGRITELVKDWPGFCIKPARGSGGKGILVILR QEDGLFYKPNGSASTGQDLERHVSNILAGLYSLGGKPDVALVEGLINFDDVFDGYSFE GVPDARVIIFKGFPVMAMMRLSTAASDGKANLHQGAVGVGLCLRTGRALRAVQFGNPL RHHPDTGLDLYELKVPHWDTLLTLAASCYEMSGLGYIGTDMVLDKFRGPMLLELNARP GLAIQIANGRGLVPNLKTIEKLGQVKMNVEQRVNFAKDHFGIFEE" misc_feature complement(1518233..1519165) /locus_tag="B565_1378" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" gene complement(1519187..1520725) /locus_tag="B565_1379" /db_xref="GeneID:10487296" CDS complement(1519187..1520725) /locus_tag="B565_1379" /codon_start=1 /transl_table=11 /product="Gonadoliberin III-like protein" /protein_id="YP_004392031.1" /db_xref="GI:330829079" /db_xref="GeneID:10487296" /translation="MVSRKPFYLLVALLYIVGLGMTIYHHIALDVPLTPGEKRQIWSI EAKLEFEATGEPVIASLAIPGTQPGFTLMNENAASPGYGLSFVEKDGDARAEWSIRTA SGRQELYYRVDMMADAHAKPAANPQPPAIEKQIESEPYATAMKQILERAQERSADGYT LTREIIKEIEKQEQNAELLKKHKSRANLIAELLNNADVPTRVVHALNLEDGRRRQELV DYLQVFNSPTDYKLFNPQTGEQGRPANLLLWEYNSGALLDVTGGHNSRVSFSMIEQEQ PVSVALAQKFEKSEMMNFSIHSLPLEEQTLFKGLLLIPIGVLMVVFLRVLVGIKTSGT FMPVLIAVAFIQTSLVTGLIGFLLIVGTGLIIRSYLSRLNLLLVARISAIIIMVISMI GIFSAFAFKLGLTDGMKITFFPMIILSWTIERMSILWEEEGPKEVFRQGGGSLLVAVI AYLAMDNELIRHLTFNFLGLQLVLMATVLLMGNYTGYKLSELKRFKPLVDEMKSGVTP GKDK" gene complement(1520729..1521517) /locus_tag="B565_1380" /db_xref="GeneID:10487297" CDS complement(1520729..1521517) /locus_tag="B565_1380" /codon_start=1 /transl_table=11 /product="ATP-dependent Zn protease" /protein_id="YP_004392032.1" /db_xref="GI:330829080" /db_xref="GeneID:10487297" /translation="MNDMKSKLKGMTLLSLLSLGGCVNMEKAPQVPALTLAELRSELS QSEQRLQTSMEQQQKQYVQQQHLLVQLNTDVTNMKESVKQVDHKLATLPSEPPKPMAI PTEKCPAPNQGHTIDGKLMVGEAEWIWVDAANDAFQARVDTGATTSSISAQEITIFER NGKNWVRFFLSHQEVDDKIQIEAPLVRHVRVRQASADDLDRRPVVRLAVRIGDMTEKA EFTLKDRSDMTFPVLLGREFLKDIAVVDVAREYIQPKPKLKDVK" misc_feature complement(1520753..1521175) /locus_tag="B565_1380" /note="Protein of unknown function (DUF785); Region: DUF785; cl01682" /db_xref="CDD:120816" gene complement(1521570..1522547) /locus_tag="B565_1381" /db_xref="GeneID:10487298" CDS complement(1521570..1522547) /locus_tag="B565_1381" /codon_start=1 /transl_table=11 /product="tRNA (mo5U34)-methyltransferase" /protein_id="YP_004392033.1" /db_xref="GI:330829081" /db_xref="GeneID:10487298" /translation="MIDFANFYQLIAKNRLSHWLHTLPAQLHAWQHDNQHGDLPRWNR ALNKLPVVSPGNIELKSRVEIGSAESLGEGERKKVESLLRHFMPWRKGPFTVHGIHID TEWRSDWKWDRVLPHISPLEGRYVLDVGCGSGYHLWRMVGEGAKLAVGIDPSPLFLCQ FEAIRHFAGNDQRAHLLPLGIQELPELRAFDTVFSMGVLYHRKSPIEHIEQLRNQLKD DGELVLETLVIDGGVNDVLMPTDRYGKMRNVWFIPSSRALKLWVERCGFTDVRIVDEN MTSTDEQRRTDWMINESLSDYLDPDNPALTVEGHPAPKRAVLIARKAKD" misc_feature complement(1521582..1522547) /locus_tag="B565_1381" /note="tRNA mo(5)U34 methyltransferase; Provisional; Region: PRK15068" /db_xref="CDD:185028" misc_feature complement(1521861..1522172) /locus_tag="B565_1381" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(1521960..1521962,1522005..1522013, 1522089..1522094,1522143..1522163)) /locus_tag="B565_1381" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(1522544..1523290) /locus_tag="B565_1382" /db_xref="GeneID:10487299" CDS complement(1522544..1523290) /locus_tag="B565_1382" /codon_start=1 /transl_table=11 /product="tRNA (Cmo5U34)-methyltransferase 2" /protein_id="YP_004392034.1" /db_xref="GI:330829082" /db_xref="GeneID:10487299" /translation="MHTKDQIFAAPIARLGDFCFDEQVVDVFPDMIQRSVPGYSNIIS AIGMMAARYAQPESRLYDLGCSLGAATQAMRRHVSQPGCRITAVDLSHPMIERARAHL SGFKSEVPVELVEADICDIEIENASVVVLNFTLQFVEPEKRAALIQRIHDGLRPGGIL ILSEKFRFEDEPVNELLIDLHLDFKRANGYSELEISQKRTALENVMRTDSLPVHQARL RDAGFVHQDLWFQCFNFGSMIAIKSSDAQP" misc_feature complement(1522802..1523116) /locus_tag="B565_1382" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(1522895..1522897,1522937..1522945, 1523021..1523026,1523084..1523104)) /locus_tag="B565_1382" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(1523566..1524414) /locus_tag="B565_1383" /db_xref="GeneID:10487300" CDS complement(1523566..1524414) /locus_tag="B565_1383" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392035.1" /db_xref="GI:330829083" /db_xref="GeneID:10487300" /translation="MSLYLGLPQWSHPSWPGQLLGLGAKPAEHLAHYATVFNSVEGNT TFYALPTPDTVQRWADAVPDHFRFNFKFPQTISHQSDLVSADKQVADFIRLLAPLHDK LGLLTLQLPARFGPEGLARLAAFIDRLPRAFRYALEVRHPEFFAKGEAERALNRLLME QGVNRVMLDSRPLFSVPATTPALVDAQGKKPRLPVHLLATANAPMVRFIGLPDPAANH PFLPSWLPHWRQWLSEGKALYLYIHTADNAQAPELARQITRLLEQEMAPWPGENDRAR QGVLRF" misc_feature complement(1523626..1524408) /locus_tag="B565_1383" /note="Protein of unknown function DUF72; Region: DUF72; cl00777" /db_xref="CDD:186183" gene 1524577..1524828 /locus_tag="B565_1384" /db_xref="GeneID:10487301" CDS 1524577..1524828 /locus_tag="B565_1384" /codon_start=1 /transl_table=11 /product="FmdB transcriptional regulator" /protein_id="YP_004392036.1" /db_xref="GI:330829084" /db_xref="GeneID:10487301" /translation="MPIYEYRCDVCGHELAKLQKLSDAPLTDCPACSKPNLVKLISAA GFRLKGTGWYETDFKPGKKKNLASCETDGACQSCPAAQG" misc_feature 1524577..1524732 /locus_tag="B565_1384" /note="Zinc ribbon domain; Region: CxxC_CxxC_SSSS; cl00993" /db_xref="CDD:197419" gene 1524861..1526627 /locus_tag="B565_1385" /db_xref="GeneID:10487302" CDS 1524861..1526627 /locus_tag="B565_1385" /codon_start=1 /transl_table=11 /product="aspartyl-tRNA synthetase" /protein_id="YP_004392037.1" /db_xref="GI:330829085" /db_xref="GeneID:10487302" /translation="MRSIYCGQVNEAHAGQTITLCGWVHRRRDLGGLIFIDMRDREGI VQVFFDPDKPDAFALASELRGEFCIQVTGVVRTRPESQRNSDMATGAIEVFAHELNII NRAEPLPLDFNQVNSEEISLKYRYLDLRRPEMAKYLKTRAKASAFVRRFMDEHGFLDI ETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRD EDLRADRQPEFTQIDVETSFMTAPQVREVMEEMIRKLWLHILNVDLGDFPIMTFDEAM RRYGSDKPDLRLPMELVDVADLLTAVEFAVFAGPANDPKGRVAALKVPGGAELSRKQI DEYTKFVGIYGAKGLAWMKVNEAANGIEGVQSPVAKFLSDAIVREILARTGAADGDII FFGADSKKVVCDAMGALRLKVGRDLGLLENSWKPLWVIDFPMFEEDGEGGLAAMHHPF TAPSNMSPAELKANPVGAYANAYDMVINGYEVGGGSVRIHNSEMQSTVFDILGITPAE QRLKFGFLLDALKYGTPPHAGLAFGLDRLSMLLTGTENIRDVIAFPKTTAAACLMTDA PSLANAAQLGELAIATTVKGDE" misc_feature 1524861..1526615 /locus_tag="B565_1385" /note="aspartyl-tRNA synthetase; Validated; Region: aspS; PRK00476" /db_xref="CDD:179042" misc_feature 1524864..1525262 /locus_tag="B565_1385" /note="EcAspRS_like_N: N-terminal, anticodon recognition domain of the type found in Escherichia coli aspartyl-tRNA synthetase (AspRS), the human mitochondrial (mt) AspRS-2, the discriminating (D) Thermus thermophilus AspRS-1, and the nondiscriminating (ND)...; Region: EcAspRS_like_N; cd04317" /db_xref="CDD:58587" misc_feature order(1524864..1524866,1524873..1524875,1524927..1524929, 1524981..1524983,1525167..1525169,1525173..1525178) /locus_tag="B565_1385" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:58587" misc_feature order(1524936..1524938,1524942..1524950,1524963..1524965, 1524996..1524998,1525050..1525052,1525092..1525094, 1525110..1525112,1525137..1525139,1525185..1525187) /locus_tag="B565_1385" /note="anticodon binding site; other site" /db_xref="CDD:58587" misc_feature 1525272..>1525700 /locus_tag="B565_1385" /note="Asp tRNA synthetase (aspRS) class II core domain. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. AspRS is a homodimer, which attaches a specific amino acid to the 3' OH group of ribose of the...; Region: AspRS_core; cd00777" /db_xref="CDD:73228" misc_feature order(1525281..1525289,1525296..1525298,1525305..1525310, 1525317..1525319,1525326..1525337,1525341..1525361, 1525380..1525382,1525389..1525403,1525413..1525424, 1525467..1525472,1525479..1525484,1525500..1525502, 1525512..1525514,1525542..1525544,1525572..1525574, 1525587..1525589) /locus_tag="B565_1385" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:73228" misc_feature 1525347..1525361 /locus_tag="B565_1385" /note="motif 1; other site" /db_xref="CDD:73228" misc_feature order(1525371..1525379,1525437..1525439,1525443..1525445, 1525452..1525454,1525509..1525511,1525515..1525517, 1525530..1525538,1525545..1525547,1525551..1525553) /locus_tag="B565_1385" /note="active site" /db_xref="CDD:73228" misc_feature 1525506..1525517 /locus_tag="B565_1385" /note="motif 2; other site" /db_xref="CDD:73228" misc_feature 1525779..1526078 /locus_tag="B565_1385" /note="GAD domain; Region: GAD; pfam02938" /db_xref="CDD:145868" misc_feature <1526130..1526531 /locus_tag="B565_1385" /note="Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it...; Region: class_II_aaRS-like_core; cl00268" /db_xref="CDD:193739" misc_feature order(1526301..1526306,1526316..1526318,1526445..1526450, 1526454..1526459,1526466..1526468) /locus_tag="B565_1385" /note="active site" /db_xref="CDD:29813" misc_feature order(1526457..1526459,1526466..1526468) /locus_tag="B565_1385" /note="motif 3; other site" /db_xref="CDD:29813" gene 1526730..1527470 /locus_tag="B565_1386" /db_xref="GeneID:10487303" CDS 1526730..1527470 /locus_tag="B565_1386" /codon_start=1 /transl_table=11 /product="protein YebC" /protein_id="YP_004392038.1" /db_xref="GI:330829086" /db_xref="GeneID:10487303" /translation="MAGHSKWANIKHRKAAQDAKRGKIFTKLIREITTSARLGDADPA NNPRLRAAVTAALTNNMTRDTINRAIQRGAGGGDGEQLETIVYEGYGPAGSAVMVECL TDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGLLTFVGVDEDALMDAALEAGAD DVVTEEDGTIEVYTTPNDFGTVLDGLEAAGFKAQSAEVTMIPSTEAELDAETAPKLMR LIDMLEDLDDVQEVYHNGSISDEVAATL" misc_feature 1526730..1527467 /locus_tag="B565_1386" /note="Domain of unknown function DUF28; Region: DUF28; cl00361" /db_xref="CDD:193787" gene complement(1528100..1530766) /locus_tag="B565_1387" /db_xref="GeneID:10487304" CDS complement(1528100..1530766) /locus_tag="B565_1387" /codon_start=1 /transl_table=11 /product="aldehyde-alcohol dehydrogenase 2" /protein_id="YP_004392039.1" /db_xref="GI:330829087" /db_xref="GeneID:10487304" /translation="MAVTNLAELDALVARVKEAQREFASFSQEQVDKIFRAAALAANN ARIPLAQMAVEESGMGIIEDKVIKNHFASEYIYNKYKEEKTCGILSEDTQMGTITIAE PVGIICGIVPTTNPTSTAIFKSMIALKTRNAIIFSPHPRAKNSTNTAAKLVLDAAVAA GAPKDIIGWIDQPSVELSNALMKHEDINLILATGGPGMVKAAYSSGKPAIGVGAGNVP IVIDETADVKRAVASILMSKTFDNGVVCASEQAVIVVDAIYDQVKERFASHKGHVLSK EDADKVRKVILINGALNANIVGQPATKIAEMAGVTVPADTKILIGEGVKLCAEDEFAH EKLSPLLGMFRASSFENAVDMACDMVNIGGIGHTSGLYTDQDRNADRIKYFGDKMKTA RILINTPSTQGGIGDLYNFAMAPSLTLGCGSWSGNSISENVGPKHLINKKTVAKRAEN MLWHKLPKSIYFRRGSLPIALSDLEGKKRAMVVTDRFLFNNGYADELVSLLKAQNMEV EVFYEVEADPTLAVVRKGAEMANSFKPDVILALGGGSPMDAAKIMWVMYEHPNTAFED LAMRFMDIRKRIYKFPKMGVKAELVCITTTSGTGSEVTPFAVVTDEVSGQKYPLADYE LTPNMAIVDANLVMGMPKSLCAFGGIDAVTHAMEAYVSVLANEYSDGQALQALKMLKE YLPSSYQNGANDPIAREKVHNAATIAGIAFANAFLGVCHSMAHKLGAEFHIPHGLANA LLISNVIRYNANDNPTKQTAFSQYDRPQARRRYAEVADHLGLTAAGDRTAAKIEKLLT WLDELKATLGIPASIREAGVTEADFLAKVDQLAIEAFDDQCTGANPRYPLISELKQVL LDSYYGRPFTEAAPVTAAPVEAKVEGKKKSKA" misc_feature complement(1528187..1530766) /locus_tag="B565_1387" /note="bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional; Region: PRK13805" /db_xref="CDD:184338" misc_feature complement(1529426..1530742) /locus_tag="B565_1387" /note="Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like; Region: ALDH_F20_ACDH; cd07122" /db_xref="CDD:143440" misc_feature complement(1530029..1530031) /locus_tag="B565_1387" /note="putative catalytic cysteine [active]" /db_xref="CDD:143440" misc_feature complement(1528196..1529398) /locus_tag="B565_1387" /note="C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD); Region: AAD_C; cd08178" /db_xref="CDD:173937" misc_feature complement(order(1528562..1528564,1528592..1528594, 1528604..1528606,1528802..1528804,1528814..1528816, 1528835..1528837,1528859..1528861,1528913..1528918, 1528973..1528975,1528979..1528984,1529114..1529116, 1529123..1529125,1529132..1529140,1529312..1529314)) /locus_tag="B565_1387" /note="putative active site [active]" /db_xref="CDD:173937" misc_feature complement(order(1528562..1528564,1528604..1528606, 1528802..1528804,1528814..1528816)) /locus_tag="B565_1387" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173937" gene 1531607..1532242 /locus_tag="B565_1388" /db_xref="GeneID:10487305" CDS 1531607..1532242 /locus_tag="B565_1388" /codon_start=1 /transl_table=11 /product="sulfate adenylyltransferase, small subunit" /protein_id="YP_004392040.1" /db_xref="GI:330829088" /db_xref="GeneID:10487305" /translation="MAAIDVSLYLKFFVGLFAIINPLGLLPVFVSLTSHHTQAERMKT NTTANIAVMVILLVSMYMGQLILDGFGISLASFRIAGGSLITLIAWSMLQGKLGEVKH NKQEKGELAVRESIAVVPLALPLMAGPGAISSVIVYASQSHWQQLLGMSVVVVVFSFC SWLIFRAAPLLFKIMGNTGINVVTRIMGLIMMSLGIEIMVAGIKGVFPSLM" misc_feature 1531607..1532239 /locus_tag="B565_1388" /note="MarC family integral membrane protein; Region: MarC; cl00919" /db_xref="CDD:186259" gene 1532522..1534141 /locus_tag="B565_1389" /db_xref="GeneID:10487306" CDS 1532522..1534141 /locus_tag="B565_1389" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter periplasmic oligopeptide-binding protein" /protein_id="YP_004392041.1" /db_xref="GI:330829089" /db_xref="GeneID:10487306" /translation="MTHKKTMINTLLVAALFGGVNVAQAADVPAGTKLAEVQQLVKGN GSEPATLDPHKTEGTVESNILRDLFEGLVASGPKGEILPAVAESWETKDNKHYVFHLR KDAKWSNGDPVTAHDFVFAFQRAVDPKTASPYSWYLEMPTIANATDIIAGKKPADTLG VKAADDYTFEVQLEKAIPYFVSMLSHTTTYPVPKKVVEQFGDKWTQPENMVSNGAYVL KKWVVNERIELERNKNYWDDGKTVINTVVYLPIQSTNADLSRYLAGEVDLTYTTPIER FKQLKKDYPNELKVTGLVSTYYYQFNFKHKPFDDVRVRTALSYAIDRDVIADKVMGQG QTPAYGLTPDYVDGFKPVVADWSKMTQAERDTKAKAMLKEAGFDASKPLKLELLYNTD DNHKKVAVAVASMWKKLGVQVSLVNQEWKTYLETKKQGQFEVARAGWNADYNEASSML DLMQTTHGTNDGKYSNLEYDKLMDESRDQVDDVARNKIYAQAEAILAKDMPIAPIYQY VTPRMVKSYVGGYPANPLDNLYSKDMYIIAH" misc_feature 1532522..1534138 /locus_tag="B565_1389" /note="oligopeptide ABC transporter substrate-binding protein OppA; Provisional; Region: PRK15104" /db_xref="CDD:185059" misc_feature 1532633..1534129 /locus_tag="B565_1389" /note="The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold; Region: PBP2_OppA; cd08504" /db_xref="CDD:173869" misc_feature order(1532705..1532707,1533329..1533331,1533398..1533400, 1533779..1533781,1533827..1533829,1533833..1533847, 1534043..1534045) /locus_tag="B565_1389" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173869" gene 1534240..1535160 /locus_tag="B565_1390" /db_xref="GeneID:10487307" CDS 1534240..1535160 /locus_tag="B565_1390" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter permease OppB" /protein_id="YP_004392042.1" /db_xref="GI:330829090" /db_xref="GeneID:10487307" /translation="MLKFIFKRLLEAIPTLLVLITVSFFMMRFAPGNPFTSERSLPPE VIANIEAKYGLDKPIGMQYLTYLGNLVQGDLGPSFKYKDFTVNDLVSQALPVSAKIGT TAFFFAVLLGVTFGTIAALKQNTIIDYLLMSSAMAGVVIPGFVLAPLLVLFFSIHLGW FPAGGWQGGGIQFMVLPVFGMMMYYISAISRIMRGSMIETMNSNFIRTARAKGLPLRH IILKHALRPAMLPVVSYLGPAFVGIITGSVVIETIFGLPGIGQLFVNGALNRDYSMVL GLTILVGALTITFNAVVDILYAFIDPKIRY" misc_feature 1534240..1535157 /locus_tag="B565_1390" /note="oligopeptide transporter permease; Reviewed; Region: oppB; PRK09471" /db_xref="CDD:181886" misc_feature 1534519..1535085 /locus_tag="B565_1390" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(1534567..1534572,1534579..1534584,1534597..1534599, 1534630..1534641,1534645..1534674,1534681..1534686, 1534690..1534692,1534789..1534794,1534798..1534800, 1534804..1534806,1534813..1534818,1534822..1534824, 1534834..1534839,1534846..1534848,1534897..1534899, 1534939..1534944,1534951..1534953,1534972..1534983, 1534990..1534995,1535020..1535025,1535053..1535058, 1535065..1535070,1535074..1535079) /locus_tag="B565_1390" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(1534648..1534692,1534972..1534989) /locus_tag="B565_1390" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(1534690..1534692,1534774..1534776,1534990..1534992, 1535014..1535016,1535023..1535025,1535053..1535055) /locus_tag="B565_1390" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(1534849..1534887,1534903..1534908,1534918..1534920) /locus_tag="B565_1390" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 1535175..1536086 /locus_tag="B565_1391" /db_xref="GeneID:10487308" CDS 1535175..1536086 /locus_tag="B565_1391" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter permease OppC" /protein_id="YP_004392043.1" /db_xref="GI:330829091" /db_xref="GeneID:10487308" /translation="MVVSTEKRDAVEAFAQKVEVVEGRSLWKDARRRFLRNKAALTSL IILTIIGLAVIFGPHLSQYTFDDPDWGAMQSPPDMEAGHYFGTDSLGRDLFVRTLLGG RISLMVGIMGAMVAVIIGTLYGAASGFIGGRVDSLMMRVLEILNAFPFMFFVIMLVTF FGRNLALIFIAIGAVSWLDMARIVRGQTLSLKSKEFIEAAHVCGVSKWKIITRHIVPN VLGIVAVYATLLVPGMIMFESFLSFLGLGVQEPMTSWGALLDEGSKSMEVAIWQLLFP ACFMVVTLFCFNFLGDGLRDALDPKDR" misc_feature 1535175..1536083 /locus_tag="B565_1391" /note="oligopeptide ABC transporter permease OppC; Provisional; Region: PRK15406" /db_xref="CDD:185304" misc_feature 1535241..1535405 /locus_tag="B565_1391" /note="N-terminal TM domain of oligopeptide transport permease C; Region: OppC_N; pfam12911" /db_xref="CDD:193384" misc_feature 1535481..1536026 /locus_tag="B565_1391" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(1535526..1535531,1535538..1535543,1535556..1535558, 1535586..1535597,1535601..1535630,1535637..1535642, 1535646..1535648,1535697..1535702,1535706..1535708, 1535712..1535714,1535721..1535726,1535730..1535732, 1535742..1535747,1535754..1535756,1535805..1535807, 1535847..1535852,1535859..1535861,1535880..1535891, 1535898..1535903,1535943..1535948,1535976..1535981, 1535988..1535993,1535997..1536002,1536009..1536014, 1536021..1536026) /locus_tag="B565_1391" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(1535604..1535648,1535880..1535897) /locus_tag="B565_1391" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(1535646..1535648,1535682..1535684,1535898..1535900, 1535937..1535939,1535946..1535948,1535976..1535978) /locus_tag="B565_1391" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(1535757..1535795,1535811..1535816,1535826..1535828) /locus_tag="B565_1391" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 1536141..1537121 /locus_tag="B565_1392" /db_xref="GeneID:10487309" CDS 1536141..1537121 /locus_tag="B565_1392" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter ATPase" /protein_id="YP_004392044.1" /db_xref="GI:330829092" /db_xref="GeneID:10487309" /translation="MKLLDVKDLRVEFKTPDGNVVAVNDLNFSLSAGETLGIVGESGS GKSQTAFAIMGLLAKNGIITGSAKFQGEEILNLPESKLNKIRSEKIAMIFQDPMTSLN PYMKVQDQLMEVLMLHKGVSKAEAFEESVRMLDAVKIPEARKRMGMYPHEFSGGMRQR VMIAMALLCRPQLLIADEPTTALDVTVQAQIMTLMNELKREFNTAIIMITHDLGVVAG ICNKVLVMYAGRTMEYGKVDDIFYRPSHPYTEGLLRAIPRLDTEGEVLPTIPGNPPNL LRLPTGCPFQERCHRVSEICGQQSPILTPFNDGRERACHWVSDAINKGAN" misc_feature 1536141..1537106 /locus_tag="B565_1392" /note="oligopeptide transporter ATP-binding component; Provisional; Region: oppD; PRK09473" /db_xref="CDD:181888" misc_feature 1536147..1536845 /locus_tag="B565_1392" /note="The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane...; Region: ABC_NikE_OppD_transporters; cd03257" /db_xref="CDD:73016" misc_feature 1536258..1536281 /locus_tag="B565_1392" /note="Walker A/P-loop; other site" /db_xref="CDD:73016" misc_feature order(1536267..1536272,1536276..1536284,1536423..1536425, 1536669..1536674,1536771..1536773) /locus_tag="B565_1392" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73016" misc_feature 1536414..1536425 /locus_tag="B565_1392" /note="Q-loop/lid; other site" /db_xref="CDD:73016" misc_feature 1536597..1536626 /locus_tag="B565_1392" /note="ABC transporter signature motif; other site" /db_xref="CDD:73016" misc_feature 1536657..1536674 /locus_tag="B565_1392" /note="Walker B; other site" /db_xref="CDD:73016" misc_feature 1536681..1536692 /locus_tag="B565_1392" /note="D-loop; other site" /db_xref="CDD:73016" misc_feature 1536759..1536779 /locus_tag="B565_1392" /note="H-loop/switch region; other site" /db_xref="CDD:73016" misc_feature 1536837..1537085 /locus_tag="B565_1392" /note="Oligopeptide/dipeptide transporter, C-terminal region; Region: oligo_HPY; cl07097" /db_xref="CDD:195461" gene 1537122..1538117 /locus_tag="B565_1393" /db_xref="GeneID:10487310" CDS 1537122..1538117 /locus_tag="B565_1393" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter ATPase" /protein_id="YP_004392045.1" /db_xref="GI:330829093" /db_xref="GeneID:10487310" /translation="MGADKKLLLEVSDLKVHFSIKSGKAWPWAKPSDLKAVDGVTLRL YEGETLGVVGESGCGKSTFARAIIGLVPATDGKVVWLGDDLTKLDQNALREKRKEIQM IFQDPLASLNPRMTIGDIIAEPLITFYPNLPREEVKEKVRAMMSKVGLLPNLVNRYPH EFSGGQCQRIGIARALILEPKMIICDEPVSALDVSIQAQVVNLLKSLQKEMGLSLIFI AHDLSVVKHISDRVLVMYLGNAVELGTRKEIFANPLHPYTKALMSAVPIPDPELERNK VIQILEGDLPSPMNPPSGCVFRTRCPVAGPECAKTRPVLEGNFDHAVSCLKVDPL" misc_feature 1537122..1538114 /locus_tag="B565_1393" /note="oligopeptide ABC transporter ATP-binding protein OppF; Provisional; Region: PRK15079" /db_xref="CDD:185037" misc_feature 1537143..1537853 /locus_tag="B565_1393" /note="The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane...; Region: ABC_NikE_OppD_transporters; cd03257" /db_xref="CDD:73016" misc_feature 1537281..1537304 /locus_tag="B565_1393" /note="Walker A/P-loop; other site" /db_xref="CDD:73016" misc_feature order(1537290..1537295,1537299..1537307,1537434..1537436, 1537677..1537682,1537779..1537781) /locus_tag="B565_1393" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73016" misc_feature 1537425..1537436 /locus_tag="B565_1393" /note="Q-loop/lid; other site" /db_xref="CDD:73016" misc_feature 1537605..1537634 /locus_tag="B565_1393" /note="ABC transporter signature motif; other site" /db_xref="CDD:73016" misc_feature 1537665..1537682 /locus_tag="B565_1393" /note="Walker B; other site" /db_xref="CDD:73016" misc_feature 1537689..1537700 /locus_tag="B565_1393" /note="D-loop; other site" /db_xref="CDD:73016" misc_feature 1537767..1537787 /locus_tag="B565_1393" /note="H-loop/switch region; other site" /db_xref="CDD:73016" misc_feature 1537839..1538102 /locus_tag="B565_1393" /note="Oligopeptide/dipeptide transporter, C-terminal region; Region: oligo_HPY; cl07097" /db_xref="CDD:195461" gene 1538420..1539364 /locus_tag="B565_1394" /db_xref="GeneID:10487311" CDS 1538420..1539364 /locus_tag="B565_1394" /codon_start=1 /transl_table=11 /product="transport protein Alx" /protein_id="YP_004392046.1" /db_xref="GI:330829094" /db_xref="GeneID:10487311" /translation="MGEWWMWTGFFSIVLVLLWIDIRFVGGGKSHKVSLKEAGVWSLI WISVALLFNLAIWLWLDHSAGREIANQKGLEFLTGYLIEKALAVDNVFVWLMLFGYFA IPAELQRRVLLYGVLGAIVMRAGMVFAGSWLIEQFHWILYLFGAFLLLTGAKMLWAAD KEPDLANNPLLGWMRRRFKVTETLEGEKFFVWRDGVRYATPLLLILVLVEVSDLIFAV DSIPAIFAVTTDPFIVLTSNIFAIMGLRAMYFLLAGVADRFALLKYGLALILMFIGVK MLLLDIFKIPTGIALGVVALILLASMGLSLFVTRKKAA" misc_feature 1538426..1539352 /locus_tag="B565_1394" /note="Integral membrane protein TerC family; Region: TerC; cl10468" /db_xref="CDD:189213" gene complement(1539429..1540655) /locus_tag="B565_1395" /db_xref="GeneID:10487312" CDS complement(1539429..1540655) /locus_tag="B565_1395" /codon_start=1 /transl_table=11 /product="alanine racemase" /protein_id="YP_004392047.1" /db_xref="GI:330829095" /db_xref="GeneID:10487312" /translation="MHKKTLLATLIFGLLAGQAVAAPYLPLATDHRSGQEQTASNAWL EVDLGAFEHNIQTLKDRLGDKGPQICAIMKADAYGHGIDLLVPSVVKANIPCIGIASN EEARVAREKGFTGRLMRVRAATPDEVEQALPYKMEELIGSLVSAQGIADIAQRHHTTI PVHIALNSAGMSRNGIDLRLADAKQDALAMLKLKGITPVGIMTHFPVEEKEDVKMGLA QFKLDSQWLLEAGKLDRSKITIHAANSFATLAVPDAYFDMVRPGGLLYGDSIPSHTEY KRVMAFKTQVASVNHYAAGNTVGYDRTFTLKRDSWLANLPLGYSDGYRRSLSNKAYVL IQGQKVPVVGKTSMNTIMVDVTDLKGVKPGDEVVLFGRQGDAEVKQADLEEYNGALLA DMYTIWGYTNPKKIKR" misc_feature complement(1539432..1540652) /locus_tag="B565_1395" /note="alanine racemase; Reviewed; Region: PRK13340" /db_xref="CDD:183984" misc_feature complement(1539435..1540535) /locus_tag="B565_1395" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme, Alanine Racemase 2; Region: PLPDE_III_AR2; cd06826" /db_xref="CDD:143499" misc_feature complement(order(1539471..1539473,1539612..1539617, 1539699..1539701,1539756..1539758,1539867..1539878, 1539921..1539926,1540044..1540046,1540137..1540139, 1540161..1540163,1540296..1540298,1540422..1540424, 1540434..1540436,1540440..1540442)) /locus_tag="B565_1395" /note="active site" /db_xref="CDD:143499" misc_feature complement(order(1539471..1539473,1539867..1539878, 1539921..1539926,1540044..1540046,1540137..1540139, 1540296..1540298,1540422..1540424,1540434..1540436, 1540440..1540442)) /locus_tag="B565_1395" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143499" misc_feature complement(order(1539453..1539458,1539468..1539473, 1539480..1539485,1539606..1539611,1539681..1539683, 1539699..1539701,1539714..1539716,1539753..1539761, 1539765..1539770,1539780..1539782,1539786..1539797, 1540038..1540040,1540044..1540046,1540134..1540145, 1540230..1540235,1540344..1540349,1540356..1540358, 1540431..1540436)) /locus_tag="B565_1395" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143499" misc_feature complement(order(1539471..1539473,1539612..1539617, 1539699..1539701,1539756..1539758,1540044..1540046, 1540137..1540139,1540422..1540424,1540434..1540436)) /locus_tag="B565_1395" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143499" misc_feature complement(order(1539756..1539758,1540434..1540436)) /locus_tag="B565_1395" /note="catalytic residues [active]" /db_xref="CDD:143499" gene 1540668..1540865 /locus_tag="B565_1396" /db_xref="GeneID:10487313" CDS 1540668..1540865 /locus_tag="B565_1396" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392048.1" /db_xref="GI:330829096" /db_xref="GeneID:10487313" /translation="MLFALDSLDGVGHIGGGLTTTCCYYYDLCHSQQALTGWESTATR VRPTLVRGRKWSILSYVCHHR" gene 1540829..1541278 /locus_tag="B565_1397" /db_xref="GeneID:10487314" CDS 1540829..1541278 /locus_tag="B565_1397" /codon_start=1 /transl_table=11 /product="Isoprenylcysteine carboxyl methyltransferase family protein" /protein_id="YP_004392049.1" /db_xref="GI:330829097" /db_xref="GeneID:10487314" /translation="MVNLELRLPPPLIFLLCAGAMWWLRGESQPGIWAMTLMAVLVVA GAIMGFGALQRFRHHQTTVSPTKPQHTSRLVTCGVYRVSRNPMYLGLLCWLVAWGCYL GGSWVWVGPIVLVALLTRFQIMPEERLLRARFGDEYVAYCQRVRRWC" misc_feature <1540862..1541272 /locus_tag="B565_1397" /note="Isoprenylcysteine carboxyl methyltransferase (ICMT) family; Region: ICMT; cl00763" /db_xref="CDD:186178" gene complement(1541390..1542514) /locus_tag="B565_1398" /db_xref="GeneID:10487315" CDS complement(1541390..1542514) /locus_tag="B565_1398" /codon_start=1 /transl_table=11 /product="Tfp pilus assembly protein, ATPase PilU" /protein_id="YP_004392050.1" /db_xref="GI:330829098" /db_xref="GeneID:10487315" /translation="MLQILAKQDGSDLYLSTGAPPCAKFNGGLRPLNETPLEPGEVAR IAAEIMDGEQKQQFEKDLEMNLAISLPQIGRFRVNIFKQRNEVSLVARNIKTEIPRFE DLKLPPVLLDTIMEKRGLVLFVGGTGSGKSTSLAALIDHRNRNSGGHIITIEDPVEFV HRHRKSIINQREVGVDTRSFHAALKNTLRQAPDVILIGEIRDRETMEHALAFSETGHL AISTLHANNANQALDRIINFFPEERRPQLLNDLGNNLKAFVSQRLVKTTDGGRRAAVE IMLGTHTIRDMIKRGEFGGLKEVMEKSKALGMVTFDSALFDLVVEGVIEEEEAVKNAD SANNLRLKIKLWKEKGQIASSSDATGWSLEPTKDEKGDFF" misc_feature complement(1541423..1542514) /locus_tag="B565_1398" /note="Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]; Region: PilU; COG5008" /db_xref="CDD:34613" misc_feature complement(1541570..1542163) /locus_tag="B565_1398" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(order(1542119..1542127,1542137..1542142)) /locus_tag="B565_1398" /note="Walker A motif; other site" /db_xref="CDD:29986" misc_feature complement(order(1541918..1541923,1542050..1542055, 1542059..1542061,1542119..1542127,1542137..1542139)) /locus_tag="B565_1398" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29986" misc_feature complement(1541921..1541935) /locus_tag="B565_1398" /note="Walker B motif; other site" /db_xref="CDD:29986" gene complement(1542588..1542944) /locus_tag="B565_1399" /db_xref="GeneID:10487316" CDS complement(1542588..1542944) /locus_tag="B565_1399" /codon_start=1 /transl_table=11 /product="transmembrane signal peptide protein" /protein_id="YP_004392051.1" /db_xref="GI:330829099" /db_xref="GeneID:10487316" /translation="MNPIFASIGLLLCSNVFMTFAWYAHLKSMNHKPWIIAALVSWGI ALFEYLLQVPANRIGHTVMSVGQLKILQEVITLTVFVPFSIFYLKEDLKWDYLWAGLC ILGAVFFVFREKLTGA" misc_feature complement(1542609..1542926) /locus_tag="B565_1399" /note="Protein of unknown function, DUF486; Region: DUF486; cl01236" /db_xref="CDD:120496" gene 1543057..1543788 /locus_tag="B565_1400" /db_xref="GeneID:10487317" CDS 1543057..1543788 /locus_tag="B565_1400" /codon_start=1 /transl_table=11 /product="extracellular solute-binding protein" /protein_id="YP_004392052.1" /db_xref="GI:330829100" /db_xref="GeneID:10487317" /translation="MGKLCGIVLLLLFAMPVRATPTLTVATDLWPPFRILQADGRLQG LDMDILRRLQQASGIELQVRRMPWGRALKQMQTGQVDLMIGLAYTAERAQFIDYLQPA YYQCWPAFYGQPVNVARIHQYRDLQGVKVGYVLNSAYFEPFNSDSRLDKHGVPTEDQL LRMVQRGHLPLMIGTDCQVDYALSQGNASRIGKADYRPATPVTLYLGMSKHSPHQSLR QPLLVALQNLVASGEISVMAKRYQP" misc_feature 1543123..1543779 /locus_tag="B565_1400" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature 1543123..1543779 /locus_tag="B565_1400" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature order(1543144..1543146,1543258..1543260,1543330..1543332, 1543468..1543470,1543579..1543581) /locus_tag="B565_1400" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(1543528..1543530,1543540..1543542,1543558..1543560) /locus_tag="B565_1400" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 1543663..1543677 /locus_tag="B565_1400" /note="hinge residues; other site" /db_xref="CDD:29040" gene 1543886..1544893 /locus_tag="B565_1401" /db_xref="GeneID:10487318" CDS 1543886..1544893 /locus_tag="B565_1401" /codon_start=1 /transl_table=11 /product="Vitamin B12 import system permease BtuC" /protein_id="YP_004392053.1" /db_xref="GI:330829101" /db_xref="GeneID:10487318" /translation="MYLSLIARQQRWQRRWLCGLTLLTLLLFFFSLVWGEFVLLPWQP LGDLEQRILLELRLPRALLALLAGAALACGGAVLQVMLHNPVAEPGLLGVSSGAGLAA MVAMAVAKSLGLYLPGWGLSLAAFGGALLVTMLLIRLARRARLGHARLLLFGVAIGIL TNAAMTWLMYFADDGSLREFMFWMMGSLSYGSQQFAWWWLVLPLTLGWLCWQGKALQQ LLLGETQARLMGMDVDKMRVRLVLAVCLLTGVAVSLCGVIGFVGLVVPHLLRLCGGSD QRFLLPASALGGGALLLAADLVARSTLSAGELPIGVITASVGAPLFIYLLLRQTADGA A" misc_feature <1544345..1544863 /locus_tag="B565_1401" /note="Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+. PBP-dependent ABC transporters consist...; Region: TM_ABC_iron-siderophores_like; cd06550" /db_xref="CDD:119348" misc_feature order(1544348..1544353,1544360..1544365,1544372..1544374, 1544381..1544386,1544390..1544392,1544426..1544431, 1544438..1544440,1544663..1544665,1544819..1544821, 1544828..1544833,1544840..1544842,1544849..1544854, 1544861..1544863) /locus_tag="B565_1401" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119348" misc_feature order(1544390..1544392,1544471..1544473,1544639..1544641, 1544651..1544653,1544783..1544785,1544810..1544812) /locus_tag="B565_1401" /note="putative PBP binding regions; other site" /db_xref="CDD:119348" misc_feature order(1544513..1544518,1544522..1544530,1544534..1544539, 1544543..1544560,1544564..1544572,1544693..1544695, 1544714..1544716) /locus_tag="B565_1401" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119348" gene 1544959..1545756 /locus_tag="B565_1402" /db_xref="GeneID:10487319" CDS 1544959..1545756 /locus_tag="B565_1402" /codon_start=1 /transl_table=11 /product="Vitamin B12 import ATP-binding protein BtuD" /protein_id="YP_004392054.1" /db_xref="GI:330829102" /db_xref="GeneID:10487319" /translation="MSPADPMLVSSRAAAPLLEARALAIAGRLSPLDIRWHGGQLVAL FGPNGSGKSTLLGALAGILPADGTVLLGGEVLTDLSWPELAKRRAMLPQRQPQLFHIP VFQVLSLGLDEMVAPARQNEAINALCEALELEALLARDFSRLSGGEQQRVLIARTLLQ VWPSLNPTGKVLLLDEPLAGLDLHHQLALLRLLKTLAAQGLLVVLAIHDINLAIDWAN RILCLQGGAVVREGGVELVDEALLAQVFQIRTDRIEAAGRVWFMPSL" misc_feature 1545037..1545744 /locus_tag="B565_1402" /note="vitamin B12-transporter ATPase; Provisional; Region: PRK03695" /db_xref="CDD:179632" misc_feature 1545040..1545654 /locus_tag="B565_1402" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 1545094..1545117 /locus_tag="B565_1402" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(1545103..1545108,1545112..1545120,1545271..1545273, 1545454..1545456,1545580..1545582) /locus_tag="B565_1402" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature order(1545226..1545234,1545271..1545273) /locus_tag="B565_1402" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 1545388..1545417 /locus_tag="B565_1402" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature order(1545448..1545453,1545454..1545456) /locus_tag="B565_1402" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 1545490..1545501 /locus_tag="B565_1402" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 1545568..1545588 /locus_tag="B565_1402" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene complement(1545779..1546237) /locus_tag="B565_1403" /db_xref="GeneID:10487320" CDS complement(1545779..1546237) /locus_tag="B565_1403" /codon_start=1 /transl_table=11 /product="aminoglycoside 6'-N-acetyltransferase Iz" /protein_id="YP_004392055.1" /db_xref="GI:330829103" /db_xref="GeneID:10487320" /translation="MTNIGWQIVPLDETLLAQWATLRQQLWPHHALSAHLQEGVEMLA NAHLNPFLALDEQSQAVGFADAALRHDYVNGCNSSPVIYLEGVYVQQASRQRGVAQAL IAQVAQWGRELGCRELASDAAIDNLDSQQMHQQLGFAETERVVFFKKALG" misc_feature complement(1545824..1546078) /locus_tag="B565_1403" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(1546244..1547308) /locus_tag="B565_1404" /db_xref="GeneID:10487321" CDS complement(1546244..1547308) /locus_tag="B565_1404" /codon_start=1 /transl_table=11 /product="3-deoxy-D-arabinoheptulosonate-7-phosphate synthase" /protein_id="YP_004392056.1" /db_xref="GI:330829104" /db_xref="GeneID:10487321" /translation="MSIHTDELRTRRLESLITPSELAHAFPITDTIAQNLLDARREVE AILAGDDQRLLVIVGPCSIHDPAAAREYAQRLNALREQYKESLCIVMRTYFEKPRTIV GWKGLINDPRLDGSFDVNEGLKLARKLLVDINEIGMPTATEFLDMVTGQYIADLITWG AIGARTTESQVHREMASALSCPVGFKNGTDGNTRIAIDAVRAARHSHIFYSPDKDGKM TIYRTAGNPFGHVILRGGHRPNYDTASVDEACEALADVGLPERLVVDFSHGNSMKDHR RQLLVAQDICDQLRRGRTGIAGIMAESFLVEGRQDVENGCAATFGQSITDACLSWSDT ETLLAMLAEAALVRLAKRQA" misc_feature complement(1546301..1547302) /locus_tag="B565_1404" /note="NeuB family; Region: NeuB; cl00496" /db_xref="CDD:186036" misc_feature complement(1546304..1547173) /locus_tag="B565_1404" /note="DAHP synthetase I family; Region: DAHP_synth_1; pfam00793" /db_xref="CDD:189723" gene 1547453..1547833 /locus_tag="B565_1405" /db_xref="GeneID:10487322" CDS 1547453..1547833 /locus_tag="B565_1405" /codon_start=1 /transl_table=11 /product="Diacylglycerol kinase" /protein_id="YP_004392057.1" /db_xref="GI:330829105" /db_xref="GeneID:10487322" /translation="MAKPGATGVTRIINATGYSMKGLKSAWINEAAFRQELMLILLLM PLAFWLGDSLNQILLLIVISWLVVIVEILNSAIEAVVDRVGSEHHELSGRAKDLGSAA VFIALALNALVWGALVGRNLLGWW" misc_feature 1547498..1547803 /locus_tag="B565_1405" /note="Prokaryotic diacylglycerol kinase; Region: DAGK_prokar; cl00526" /db_xref="CDD:153830" gene complement(1547915..1549147) /locus_tag="B565_1406" /db_xref="GeneID:10487323" CDS complement(1547915..1549147) /locus_tag="B565_1406" /codon_start=1 /transl_table=11 /product="D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein" /protein_id="YP_004392058.1" /db_xref="GI:330829106" /db_xref="GeneID:10487323" /translation="MTAKFSLDKDKIKVLLLEGVHPNTVETFRAAGYTSVEYLKTSLS EEELIEQIRDVHFIGLRSRTQITEKVLDAANKLVAIGCFCIGTNQVELEAAQVRGIPV FNAPFSNTRSVAELVLGEILLLLRGIPEKNAKCHRGVWEKLANRSVEARGKKLGIIGY GHIGTQLGIIAESIGMKVYYYDIENKLSLGNAIQVPSMVELLNMSDVISLHVPETAST KNMIGAEQLRMMKPGAIFINAARGTVVDIDALADVIKSGHIAGAAIDVFPVEPKSNDE EFQSPLRGLENVILTPHIGGTTHEAQENIGLEVANKLVKYSDNGSTLSAVNFPEVSLP GHKGSSRLLHIHRNQPGVMNQINQIFAEEGINIAGQYLQTSSHIGYVVIDVETEHSEK ALAKLKEINGTIRARILH" misc_feature complement(1547918..1549144) /locus_tag="B565_1406" /note="D-3-phosphoglycerate dehydrogenase; Provisional; Region: PRK11790" /db_xref="CDD:183316" misc_feature complement(1548263..1548763) /locus_tag="B565_1406" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(1547921..1548127) /locus_tag="B565_1406" /note="C-terminal ACT (regulatory) domain of D-3-Phosphoglycerate Dehydrogenase (3PGDH) found in fungi and bacteria; Region: ACT_3PGDH; cd04901" /db_xref="CDD:153173" misc_feature complement(order(1548050..1548052,1548104..1548106, 1548110..1548112)) /locus_tag="B565_1406" /note="L-serine binding site [chemical binding]; other site" /db_xref="CDD:153173" misc_feature complement(order(1548026..1548046,1548050..1548052, 1548077..1548079,1548086..1548091,1548098..1548100, 1548104..1548106)) /locus_tag="B565_1406" /note="ACT domain interface; other site" /db_xref="CDD:153173" gene complement(1549462..1550115) /locus_tag="B565_1407" /db_xref="GeneID:10487324" CDS complement(1549462..1550115) /locus_tag="B565_1407" /codon_start=1 /transl_table=11 /product="ribose-5-phosphate isomerase A" /protein_id="YP_004392059.1" /db_xref="GI:330829107" /db_xref="GeneID:10487324" /translation="MTQDEMKKAAGWAALKYVVPGTIVGVGTGSTVNHFIDALATMKD EIKGAVSSSVASTERLKGFGITVYDLNEIDALSVYVDGADEINATRDMIKGGGAALTR EKIVAAVADKFICIIDNTKTVDVLGQFPLPVEVIPMAREYVAREIRKLGGNPVWREGV VTDNGNHILDVKGMAITDAKALEVRLNAIVGVVTNGLFAARGADVVLIGTPDGVITQ" misc_feature complement(1549486..1550100) /locus_tag="B565_1407" /note="RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. This reaction leads to the...; Region: RPI_A; cd01398" /db_xref="CDD:73164" misc_feature complement(order(1549615..1549617,1549627..1549629, 1549633..1549635,1549642..1549647,1549825..1549830, 1549909..1549911,1549915..1549917,1549942..1549947, 1549954..1549956,1550032..1550034)) /locus_tag="B565_1407" /note="tetramer (dimer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:73164" misc_feature complement(order(1549753..1549755,1549807..1549809, 1549825..1549836,1549864..1549866,1549870..1549875, 1550023..1550028,1550032..1550034)) /locus_tag="B565_1407" /note="active site" /db_xref="CDD:73164" misc_feature complement(order(1549537..1549539,1549552..1549557, 1549681..1549683,1549690..1549698,1549702..1549707, 1549789..1549791,1549810..1549812,1549894..1549896, 1549906..1549908)) /locus_tag="B565_1407" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73164" gene complement(1550277..1550873) /locus_tag="B565_1408" /db_xref="GeneID:10487325" CDS complement(1550277..1550873) /locus_tag="B565_1408" /codon_start=1 /transl_table=11 /product="5-formyltetrahydrofolate cyclo-ligase family protein" /protein_id="YP_004392060.1" /db_xref="GI:330829108" /db_xref="GeneID:10487325" /translation="MHESQPERQSLRQLVRQRRKNLSPAEQQAAAQQLLAQFKQHPEI LAAKRIALYLANDGEINPLPTIHWLWAQHKEVYLPVLHPFTPGHLLFLRYTATSPMVR NRYGIEEPELDILQVVPHSTLDLICTPLVAFDAQGNRLGMGGGYYDRTLAIWHEHKLG PKPLGIAHDCQQVDAVPQEEWDVPLPQIITPSHCWRFE" misc_feature complement(1550289..1550753) /locus_tag="B565_1408" /note="5-formyltetrahydrofolate cyclo-ligase family; Region: 5-FTHF_cyc-lig; cl00360" /db_xref="CDD:193786" gene complement(1551187..1552521) /locus_tag="B565_1409" /db_xref="GeneID:10487326" CDS complement(1551187..1552521) /locus_tag="B565_1409" /codon_start=1 /transl_table=11 /product="Na+/H+ antiporter" /protein_id="YP_004392061.1" /db_xref="GI:330829109" /db_xref="GeneID:10487326" /translation="MIQIQPSARALLPLLVFLALFIGTGTWLTLQGVEFAFYQLPAPV AALPAVMLALLLGKESFNSNLETFFKGVGHSNIMAMCLIYLLAGAFASVAKATGGVDA TVALGLSLIPGWALLPGLFLISAFIATAMGTSMGTIGAVAPVALGVAQAAGIDPVLMA GTILSGAMFGDNLSIISDTTIAATRSQGCEMKDKFRENFKIAAPAAIAVILLYLTLGS VGESPANGSAIELFKVMPYLLILGLALAGVNVFVVLGIGILAAGVVGMINGYAIGQFS KDIYQGFTGMQEIFLLSMLIGGLGALMERQGGLAWISERISALIARFTREHNGEQNEK AAELGIAGVVSLTNLCTANNTVAIIVASKVARDLAEHHGVTPRRAASMLDIFSCVVQG LIPWGAQALLLGSIFALSPLAVVSMSFYPMALAVAALIAVFVKHQMRGKADK" misc_feature complement(1551970..>1552290) /locus_tag="B565_1409" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature complement(1551304..1552026) /locus_tag="B565_1409" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene complement(1552960..1554003) /locus_tag="B565_1410" /db_xref="GeneID:10487327" CDS complement(1552960..1554003) /locus_tag="B565_1410" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase fold protein" /protein_id="YP_004392062.1" /db_xref="GI:330829110" /db_xref="GeneID:10487327" /translation="MKCQHKQNQGNARVDIKRGARMNAGLLFAVGLISLTLVILAAAL LFGGPNPAPAMASINDPFKGSDWSNMPPLSRYPARDGTQLAYRHYGAEGNTKNNKVKG SVVLVHGSSASSQSMHKMASAFSQAGYDAYALDIRGHGASGDKGTIAYIGQLEDDLED FIKSVAPGKPATLVGFSSGGGFVLRVAGSARQTLFESYLLLSPYLGPTAANYRPNSGG WVRVGLPRLIALSILNGFHISALNHLTVLNFALKDEAKSLLTPSYSFNLASNFQPERD HQQNIRNVQRPCAVIAGANDEAFQTDQLEPELRRLGISWPVTLLPGIGHIPLTLEQDA LATAVQAVEKLTQ" misc_feature complement(1553515..1553763) /locus_tag="B565_1410" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" misc_feature complement(1552990..1553694) /locus_tag="B565_1410" /note="Alpha/beta hydrolase family; Region: Abhydrolase_6; pfam12697" /db_xref="CDD:193173" gene 1554088..1555026 /locus_tag="B565_1411" /db_xref="GeneID:10487328" CDS 1554088..1555026 /locus_tag="B565_1411" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate reductase" /protein_id="YP_004392063.1" /db_xref="GI:330829111" /db_xref="GeneID:10487328" /translation="MASQWALPLASAARSGGIMAFQTRRGLVKRSLSIIKRDERVEMD NPIRVAVMGCNGRMGKVLLEAITNTDGVVVGAALERPGSAVIGLDAGELNGLGHLGVA ISDSLDKVRDEFDLIIDFTRPEVTLANLAFALAHHKQMVIGTTGFDDAGKAALKEAGK QIGIVFASNYSVGVNLVFKLLEQAAKVMGDYTDIEIIEGHHRHKVDAPSGTALSMGEV VAKTLGRDLKECAVYGREGITGERDRNTIGFATIRAGDLVGEHTVMFADIGERVEISH KASSRLTFANGAVRAGKWLGQQGAGLYDMQDVLNLK" misc_feature 1554223..1555020 /locus_tag="B565_1411" /note="dihydrodipicolinate reductase; Provisional; Region: PRK00048" /db_xref="CDD:178822" misc_feature 1554226..1554597 /locus_tag="B565_1411" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 1554604..1555014 /locus_tag="B565_1411" /note="Dihydrodipicolinate reductase, C-terminus; Region: DapB_C; pfam05173" /db_xref="CDD:191215" gene 1555801..1556832 /locus_tag="B565_1412" /db_xref="GeneID:10487329" CDS 1555801..1556832 /locus_tag="B565_1412" /codon_start=1 /transl_table=11 /product="carbamoyl phosphate synthetase, glutamine amidotransferase small subunit" /protein_id="YP_004392064.1" /db_xref="GI:330829112" /db_xref="GeneID:10487329" /translation="MTGYQEILTDPSYSRQIVTLTYPHIGNTGTNSEDEESSQIHAQG LIIRDLPILASNFRNQQSLSEYLKSHNIVGIADIDTRKLTRILREKGAQAGCILAGKQ VDEAYALEQARAFPGLKGMDLAKEVTVGEAYNWTTGSWQLGKGHVTPDADQLKYHVVA YDFGVKRNILRMLVDRGCRLTVVPAKTPAAEVLAMNPDGIFLSNGPGDPEPCDYAIEA IKAFLNTNTPVFGICLGHQLLGLASGAKTVKMKFGHHGANHPVKSLDDNTVMITAQNH GFAVDENSLPDCLRATHVSLFDGSLQGIHRTDRPAFSFQGHPEASPGPHDCAGLFDHF IELIKQYRA" misc_feature 1555801..1556814 /locus_tag="B565_1412" /note="carbamoyl phosphate synthase small subunit; Reviewed; Region: PRK12564" /db_xref="CDD:183597" misc_feature <1555801..1556091 /locus_tag="B565_1412" /note="Carbamoyl-phosphate synthase small chain, CPSase domain; Region: CPSase_sm_chain; pfam00988" /db_xref="CDD:144543" misc_feature 1556272..1556805 /locus_tag="B565_1412" /note="Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II; Region: GATase1_CPSase; cd01744" /db_xref="CDD:153215" misc_feature order(1556497..1556499,1556749..1556751,1556755..1556757) /locus_tag="B565_1412" /note="catalytic site [active]" /db_xref="CDD:153215" misc_feature order(1556572..1556574,1556578..1556580,1556599..1556601, 1556605..1556607,1556686..1556688,1556764..1556769, 1556773..1556778) /locus_tag="B565_1412" /note="subunit interface [polypeptide binding]; other site" /db_xref="CDD:153215" gene 1556853..1560077 /locus_tag="B565_1413" /db_xref="GeneID:10487330" CDS 1556853..1560077 /locus_tag="B565_1413" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthase, large subunit" /protein_id="YP_004392065.1" /db_xref="GI:330829113" /db_xref="GeneID:10487330" /translation="MPKRNDLQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV VLVNSNPATIMTDPEMADATYIEPITWEVVREIIKKERPDAILPTMGGQTALNCALAL EKHGVLAEFGVEMIGATADAIDKAEDRSRFDKAMRSIGLECPRAGIAHNMEEAWGVQQ MVGFPCIIRPSFTMGGSGGGIAYNTEEFVEICERGLDLSPTKELLIDESLIGWKEYEM EVVRDRNDNCIIVCAIENFDPMGIHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIG VETGGSNVQFGINPKDGRMVIIEMNPRVSRSSALASKATGFPIAKIAAKLAIGYTLDE LMNDITGGRTPASFEPAIDYVVTKVPRFNFEKFAGANDRLTTQMKSVGEVMAIGRNFQ ESLHKALRSLETGKTGFDPMVDLNAPDSLTRIRHELQDAGSDRIFYIADAFRAGLSMD GIFKLTKIDPWFLVQIEDLVKLEEEVKERGMAGLDADFLRALKRKGFADARLAKILGV AEGEVRKLRARHNIFPVYKRVDTCAAEFATNTAYMYSSYDEECEAAPSNRDKIMIIGG GPNRIGQGIEFDYCCVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLED VLEIVRIEKPKGVIVQYGGQTPLKLARALEANGVPIIGTSPDAIDRAEDRERFQSAVE RLGLKQPENGTVTALEQAVLLAERITYPLVVRPSYVLGGRAMEIVYDEQDLRRYFAEA VSVSNESPVLLDRFLDDATELDVDAICDGTDVVIGGIMEHIEQAGIHSGDSGCSLPPY TLSKKIQDEIREQVRKLALELGVIGLMNVQFAVKGDDIYLIEVNPRAARTVPFVSKAT GAPLAKIAARVMAGQSLQEQGFTKEIIPPYYSVKEVVLPFAKFPGVDPLLGPEMRSTG EVMGVGSSFAEAYAKAQLGANHAVPKEGRALLSVRHSDKAQVVDLAAKLLELGYELDA THGTAVALGEASINPRLVNKVHEGRPHILDRIKNGEYTYIVNTAEGRVAIQDSKQLRR AALQNKVAYTTTMNEAFATCMAISVDATANVNSVQELHQKVKNR" misc_feature 1556853..1560056 /locus_tag="B565_1413" /note="carbamoyl phosphate synthase large subunit; Reviewed; Region: carB; PRK05294" /db_xref="CDD:179998" misc_feature 1556871..1557218 /locus_tag="B565_1413" /note="Carbamoyl-phosphate synthase L chain, N-terminal domain; Region: CPSase_L_chain; pfam00289" /db_xref="CDD:189488" misc_feature 1557234..1557857 /locus_tag="B565_1413" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" misc_feature 1558122..1558493 /locus_tag="B565_1413" /note="Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Region: CPSase_L_D3; pfam02787" /db_xref="CDD:190426" misc_feature 1558527..1558853 /locus_tag="B565_1413" /note="Carbamoyl-phosphate synthase L chain, N-terminal domain; Region: CPSase_L_chain; pfam00289" /db_xref="CDD:189488" misc_feature 1558869..1559477 /locus_tag="B565_1413" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" misc_feature 1559676..1560005 /locus_tag="B565_1413" /note="Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways...; Region: MGS_CPS_II; cd01424" /db_xref="CDD:29636" misc_feature order(1559691..1559693,1559709..1559711,1559769..1559771, 1559775..1559780,1559826..1559828,1559892..1559900) /locus_tag="B565_1413" /note="IMP binding site; other site" /db_xref="CDD:29636" misc_feature order(1559772..1559774,1559784..1559786,1559808..1559810, 1559814..1559819,1559823..1559825,1559859..1559861) /locus_tag="B565_1413" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29636" misc_feature order(1559967..1559969,1559982..1559984,1559994..1559996) /locus_tag="B565_1413" /note="interdomain contacts; other site" /db_xref="CDD:29636" misc_feature 1559967..1559975 /locus_tag="B565_1413" /note="partial ornithine binding site; other site" /db_xref="CDD:29636" gene 1560378..1561529 /locus_tag="B565_1414" /db_xref="GeneID:10487331" CDS 1560378..1561529 /locus_tag="B565_1414" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392066.1" /db_xref="GI:330829114" /db_xref="GeneID:10487331" /translation="MTALPSCRLLAFCSALLLAGCASDPASAPAKEASVSNPKTPPAM QPRKPADMKSRIVRFLPRQVPDKQGWASDVVTALTTQGVTVNDHNVCSVLAVAEQEAT YQADPVVPGLGKIAWKEINSRAAKLLIPEFMVRAALSINSPTGKSYAERIDKLRTERE MSEIFEDMISMLPMGKTLFGNLNPVHTGGPMQVSIAFAEANARGYPYPIKDSIRHEVF TRRGGIWFGTKHIFGYPADYPDTLYRFADFNAGWYASRNAAFQAAVSRLSGKTLALDG DLIRYDSDLPGNTELAVYTLANRVNMSKQAIHQSLRKGDTAAFAETDLYHRIFTLADK QAGKRLPRAILPGIQLKSPKITRNLTTAWFAKRVDDREQRCVRQMATIR" misc_feature 1560564..1561508 /locus_tag="B565_1414" /note="Protein of unknown function (DUF1615); Region: DUF1615; pfam07759" /db_xref="CDD:149043" gene complement(1561690..1562862) /locus_tag="B565_1415" /db_xref="GeneID:10487332" CDS complement(1561690..1562862) /locus_tag="B565_1415" /codon_start=1 /transl_table=11 /product="Chorismate mutase I/cyclohexadienyl dehydrogenase" /protein_id="YP_004392067.1" /db_xref="GI:330829115" /db_xref="GeneID:10487332" /translation="MIFRASPLRRQQGLDMAEELNVLRDKIDAVDKQLIDLLAARLAL VGEVGEVKSRHGLPIYAPDREASMLARRRAEAEQLGVPGDLIEDVLRRVMRESYASEK DTGFKCIKPDLGKVVIIGGQGQLGRLFGHMFSLSGYRVETLEQADWPRADEILAGAGL VMVAVPIDITCQIIDRLGNLPAHCLLVDVTSVKAAPLEHMLAVHQGPVLGLHPMFGPD VASLAKQVIVCCQGRDPAASQWLLDQMTIWGARLQQVEAKAHDEAMTLIQALRHFATF AYGWHLSREQANLDRLLSLSSPIYRLELAMVGRLFAQDPHLYADIILSSPQNLAMIRR YYQNFGEALGLLERGDRDGFIAAFSQVSGFFGEHADQFLRESRMLLAQANDRRQHG" misc_feature complement(1561696..1562817) /locus_tag="B565_1415" /note="bifunctional chorismate mutase/prephenate dehydrogenase; Provisional; Region: tyrA; PRK11199" /db_xref="CDD:183035" misc_feature complement(1562557..1562805) /locus_tag="B565_1415" /note="Chorismate mutase type II; Region: CM_2; cl00693" /db_xref="CDD:186149" misc_feature complement(<1562212..1562520) /locus_tag="B565_1415" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(1561801..1562409) /locus_tag="B565_1415" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene complement(1562952..1564025) /locus_tag="B565_1416" /db_xref="GeneID:10487333" CDS complement(1562952..1564025) /locus_tag="B565_1416" /codon_start=1 /transl_table=11 /product="phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive" /protein_id="YP_004392068.1" /db_xref="GI:330829116" /db_xref="GeneID:10487333" /translation="MQRDPLNNIHIQSEQVMITPAQLKEKLPISDKALAFVQGARNTI ADIIHRRDHRLLVICGPCSIHDMDAAKEYATRLKALHDAYQDSLYIVMRVYFEKPRTT VGWKGFINDPNLDGTFDVELGLHRARELLCWLAELELPLATEALDPISPQYLAELFSW SAIGARTTESQTHREMASGLSMPVGFKNGTDGNLGTAINALQAASSPHAFMGINQQGQ VALLQTQGNPDGHVILRGGKHPNYDSVNVSLAEEALEKAGLLPSLVVDCSHGNSSKDH RLQPKVADNVIHQIQEGNRSIIGVMLESNLFEGNQSSEQPKQQMHYGVSITDACIDWD TTATLLARCHNQLADPLKSRTAR" misc_feature complement(1562955..1564025) /locus_tag="B565_1416" /note="NeuB family; Region: NeuB; cl00496" /db_xref="CDD:186036" misc_feature complement(1563003..1563893) /locus_tag="B565_1416" /note="DAHP synthetase I family; Region: DAHP_synth_1; pfam00793" /db_xref="CDD:189723" gene complement(1564430..1565731) /locus_tag="B565_1417" /db_xref="GeneID:10487334" CDS complement(1564430..1565731) /locus_tag="B565_1417" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate adenylyltransferase" /protein_id="YP_004392069.1" /db_xref="GI:330829117" /db_xref="GeneID:10487334" /translation="MLLQPANTAKSRQLLNETMALVLAGGRGSRLKQLTDNRAKPAVH FGGKFRIIDFVLSNCINSGIRRVGVVTQYKSHSLLRHLQSGWSFLRYQMNEFIDLLPA QQRVDEVNWYRGTADAVYQNLDIIRDHAPKYVVVLAGDHIYKMDYAAMLLDHVNMGAK VTVACIEVPRSEASAFGVMAVDDDRKINAFVEKPANPPAMPGKADTALASMGVYVFDA EYLYQLLEEDIANEQSHHDFGMDVIPRVVKEGTAFAHPFGMSCVGCCPDRRPYWRDVG TVDSFWEANMDLASVTPELDIYDQDWPIWTSQNMTPPAKFVQDRNGQHGMTINSMFAG GTIVSGSFILSSVLFTNVRVDSFCTLDQAVIFPGVEIGAGCRLRRVVIDKGCKLPEGT VIGENADEDARRFHRSEQGIVLVTQGMLTRLNKELQGKQKR" misc_feature complement(1564451..1565698) /locus_tag="B565_1417" /note="glucose-1-phosphate adenylyltransferase; Provisional; Region: glgC; PRK00725" /db_xref="CDD:179099" misc_feature complement(1564907..1565674) /locus_tag="B565_1417" /note="ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch; Region: ADP_Glucose_PP; cd02508" /db_xref="CDD:133002" misc_feature complement(order(1565012..1565017,1565021..1565023, 1565312..1565317,1565387..1565389,1565393..1565395, 1565654..1565659,1565663..1565665)) /locus_tag="B565_1417" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:133002" misc_feature complement(order(1565345..1565350,1565360..1565362, 1565366..1565368,1565420..1565422,1565429..1565431, 1565438..1565440,1565495..1565497,1565504..1565506)) /locus_tag="B565_1417" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:133002" misc_feature complement(1564472..1564777) /locus_tag="B565_1417" /note="Glucose-1-phosphate adenylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Glucose-1-phosphate adenylyltransferase is also known as ADP-glucose synthase or ADP-glucose pyrophosphorylase. It catalyzes the first committed and rate-...; Region: LbH_G1P_AT_C; cd04651" /db_xref="CDD:100056" misc_feature complement(1564736..1564774) /locus_tag="B565_1417" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:100056" misc_feature complement(order(1564478..1564480,1564583..1564585, 1564682..1564684,1564691..1564693,1564697..1564699, 1564730..1564735,1564745..1564747)) /locus_tag="B565_1417" /note="N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:100056" misc_feature complement(order(1564481..1564483,1564580..1564585)) /locus_tag="B565_1417" /note="sulfate 1 binding site; other site" /db_xref="CDD:100056" gene complement(1566015..1566932) /locus_tag="B565_1418" /db_xref="GeneID:10487335" CDS complement(1566015..1566932) /locus_tag="B565_1418" /codon_start=1 /transl_table=11 /product="protein-export membrane protein SecF" /protein_id="YP_004392070.1" /db_xref="GI:330829118" /db_xref="GeneID:10487335" /translation="MLRMIVAMGLTRWRYIGLWASILLTVASVAILLVNGLTLGLDFT GGILLEFHIQTLKEAHELNAMLVSPLAGAVELSSAGIPGEWLIKLPPHELPWPAADLA TMLTQQLGMPVELLRTTIVGPQVGAELFQQGMLAVLVASLAMSAYLAFRFEWRQAIGI LLSVVHDAIVALGLLSLFQIEFDLNIIAGLMAVIGYSLNDSIVISDRLRDLLSSRTQM GIHECSDVAIKATFSRTMITSGTTLFTVGALLLFGGDALYGFSFTLFAGILVGTVSSI TVASTVQELLGLTPQAYQKKSEEPLANAA" misc_feature complement(1566033..1566905) /locus_tag="B565_1418" /note="preprotein translocase subunit SecF; Reviewed; Region: secF; PRK13021" /db_xref="CDD:171840" misc_feature complement(1566087..1566596) /locus_tag="B565_1418" /note="Protein export membrane protein; Region: SecD_SecF; cl14618" /db_xref="CDD:176628" gene complement(1567084..1568886) /locus_tag="B565_1419" /db_xref="GeneID:10487336" CDS complement(1567084..1568886) /locus_tag="B565_1419" /codon_start=1 /transl_table=11 /product="protein-export membrane protein SecD" /protein_id="YP_004392071.1" /db_xref="GI:330829119" /db_xref="GeneID:10487336" /translation="MRKSNRTVLNRMSKWQYALLLLMLLTFTFYSLPTFFGEQPSLGL HGQQRLTTQQQMLLSDKHLTPVKVIEQPERVELVFASQGEQQRAKQLLEQQGVDSAAL TLEFHSNAPAWITRLGADPIKLGLDLRGGSQLLIGVDVDFVIDNQTKNLVDTLRTRFR EANLRGASVTRSAQGAVAVTLPEVAEQESWLSIIKESAGTRQDQWKLTRSGNDLKLVL SEAERTLLVNNAVTQNLSILKKRINELGIVEASVVRQGQDGIRIELPGVHNPKQAKEV IGATASLAFYEAKADSHFYIADRNGQAVGMARKPVLTGEHIVDARANMGEMGQPQVNI VLDTLGGSKMNQFSRQHVGKPMATVFTEYKTNAQGKLRAQSEVINVATIQTALGNQFR ITGIGSLPEAQELAMLLRAGALTAPLKILEERSIGPTLGMQNIEAGFTALAFGMAGMM LFMMAWYRKFGWVAITALVANLLMQVGMLAVLPGAVLTLPGIAGLVLTVGMAVDTHVL IFERIRDRLREGGSLANAIDFGYRSAFHTIFDANITTLICAVVLYSIGSGPLQGFSIT LILGLLSSMITGIWGTRAIINPLWGRSSERTLKV" misc_feature complement(1567087..1568883) /locus_tag="B565_1419" /note="preprotein translocase subunit SecD; Reviewed; Region: secD; PRK12933" /db_xref="CDD:183831" misc_feature complement(1567150..1567617) /locus_tag="B565_1419" /note="Protein export membrane protein; Region: SecD_SecF; cl14618" /db_xref="CDD:176628" gene complement(1569045..1569479) /locus_tag="B565_1420" /db_xref="GeneID:10487337" CDS complement(1569045..1569479) /locus_tag="B565_1420" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392072.1" /db_xref="GI:330829120" /db_xref="GeneID:10487337" /translation="MRLIDKVKLVLVTLVIALTLLCSIARMEGPLLPASPQSEQQQTQ VFNQLSDSDDGIIKFVGSHQNHLLRLEQSLRSDNQPKSVVYELIQSWSAQAILLLLLG WLMLAPELYHKQSFRDRFGAIHRRHLQRQHLQYRFTQSYLSA" gene complement(1569575..1570432) /locus_tag="B565_1421" /db_xref="GeneID:10487338" CDS complement(1569575..1570432) /locus_tag="B565_1421" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392073.1" /db_xref="GI:330829121" /db_xref="GeneID:10487338" /translation="MINKVRWHKPKTWGLLLIGLLLTGCSTRVIYYWLDTAIIWQLDD YFALSYSQKDLLSREVKGLMAWHRQHELPRYAKDLDALAKAVASPMTPEQISTNLDAV QQSLTRTLENTIPRAVRLARTLTDEQVARFMTDRVKRQQERQKDFATEPKEQMLAEFR DKMNKRLEFWIGEVKPAQAPLVAQWAEWQYELMPPWLEFQESWTQELDRLMKQRQSPD FTRELTDLLAEGDGLMDGRFTGYTEQSRQRTVNWLSAMSQSLDISQRAHLYSLLKGYA RDFKQMSGS" gene complement(1570436..1571281) /locus_tag="B565_1422" /db_xref="GeneID:10487339" CDS complement(1570436..1571281) /locus_tag="B565_1422" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392074.1" /db_xref="GI:330829122" /db_xref="GeneID:10487339" /translation="MAGNRLPQTDNCDPLLASLPAPWREGQLEPLGLGLTNCNYRLRL PSGRSYFLRQGHPDPLRLGIDRSTEWQLYQGAIAEGLALPCHYGDAASGLMLLEWCDE PNWVHAAPPAVDQPSLLAEVLRKLHRLPLPAVVMAVRAHATGYRARLAHIPFWLPALE RSLLASSEPNDCWRPCHHDLNPANLLGSKPWVIDWEYGAAGHPGFELASIQRTHEWPA ERRDELEAHYLQALPRHQWPDFQSEAFLPWVDYIGLLWALLMAEQQPSLDYDTLIAIN RQRLE" misc_feature complement(1570580..1571200) /locus_tag="B565_1422" /note="Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and...; Region: ChoK; cd05151" /db_xref="CDD:88614" misc_feature complement(1570589..1571200) /locus_tag="B565_1422" /note="Phosphotransferase enzyme family; Region: APH; pfam01636" /db_xref="CDD:190058" misc_feature complement(order(1570628..1570630,1570643..1570645, 1570691..1570693,1570700..1570705,1570724..1570726, 1570730..1570735,1570739..1570741,1570745..1570747, 1570961..1570966,1570976..1570978,1570982..1570993, 1571033..1571035,1571123..1571125,1571129..1571131, 1571165..1571167,1571171..1571176,1571180..1571182, 1571186..1571188)) /locus_tag="B565_1422" /note="active site" /db_xref="CDD:88614" misc_feature complement(order(1570700..1570705,1570724..1570726, 1570733..1570735,1570961..1570966,1570976..1570978, 1570982..1570993,1571033..1571035,1571123..1571125, 1571129..1571131,1571165..1571167,1571171..1571173, 1571186..1571188)) /locus_tag="B565_1422" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:88614" misc_feature complement(order(1570628..1570630,1570643..1570645, 1570691..1570693,1570730..1570732,1570739..1570741, 1570745..1570747,1571174..1571176,1571180..1571182)) /locus_tag="B565_1422" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:88614" misc_feature complement(order(1570886..1570888,1571018..1571029, 1571057..1571062,1571069..1571074,1571081..1571083)) /locus_tag="B565_1422" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:88614" gene complement(1571271..1571867) /locus_tag="B565_1423" /db_xref="GeneID:10487340" CDS complement(1571271..1571867) /locus_tag="B565_1423" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392075.1" /db_xref="GI:330829123" /db_xref="GeneID:10487340" /translation="MKMNHALLILTSALLLGGCSSTTVSYGDPTETETVTVDYGSSDL QAIADKMADSMLASPATSEITAGGRPVMFMDSIRNKTSEHIDTEAITDTIRTKLLRAG KFRFVDMSKVAAVKQQLEYQQSSGMVDPASMVRLGKQTGARYMVYGNLASIVKDNGKV KDVYYQMTMNLMDLQNGELLWADQKEIRKQAKKSTFGW" misc_feature complement(1571301..1571819) /locus_tag="B565_1423" /note="Curli production assembly/transport component CsgG; Region: CsgG; cl00639" /db_xref="CDD:193894" gene complement(1571867..1572265) /locus_tag="B565_1424" /db_xref="GeneID:10487341" CDS complement(1571867..1572265) /locus_tag="B565_1424" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392076.1" /db_xref="GI:330829124" /db_xref="GeneID:10487341" /translation="MKAYGLAFGLALLLSGCATNTSGIALYGPAGGAPTLEQHQNVNV TLTELSRRQQNGLLQVNVAAASTQRGDNKLQYIFYWYDEAGQEVASDGRGWTPIKLHG YQTRTLSALAPSPAAQGYRIYVREVIEESY" misc_feature complement(1571891..1572136) /locus_tag="B565_1424" /note="Putative periplasmic lipoprotein; Region: DUF1425; cd09030" /db_xref="CDD:176923" misc_feature complement(order(1571891..1571905,1571981..1571983, 1572122..1572124,1572128..1572130,1572134..1572136)) /locus_tag="B565_1424" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:176923" gene complement(1572349..1573785) /locus_tag="B565_1425" /db_xref="GeneID:10487342" CDS complement(1572349..1573785) /locus_tag="B565_1425" /codon_start=1 /transl_table=11 /product="TPR domain-containing protein" /protein_id="YP_004392077.1" /db_xref="GI:330829125" /db_xref="GeneID:10487342" /translation="MNRNASTCRSALLLCGALLLLGGCASRWQDMFVSYSDQMVPLRN QLLLGHAAEALPEVRDSTLGDDTFVLDRLEQGRIAWLAGQDAGSKQAFAAADSRLQWE DNQAEYRLSHGLDQVGSLLTNDQSMAYRTPDYERTMLHHYLALNYLQRGDADGALVEV RRANQVQEQALKRRADEVRKAKDESEEAEAEGEMRQLMSRGAPDLDRLIGKVKNGFQN AYTFYFSAVLYEAAGDLNDAWVDYQRGYQIAPDNRSLQDALLRLARLRGSPDEIRETE KKIGRKAPPLAKDQGQLVVLFEDGLIPARRELFLPLPISTSRGDFRTFTVAIPYYDNR ASDTGPLTVEVGKRVEQTSELVRLEALAAKDLQERLPGMLTRQALRLVAKEQMRRTAA KEGGDVGNILVGIFNTLSERADTRSWLTLPAQASSWQGMVPAGDINLTLGAGAAQRQL PLTIHKGRTTLVWVQRLGAGLTTRVMPL" misc_feature complement(1572382..1573590) /locus_tag="B565_1425" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3014" /db_xref="CDD:32831" gene complement(1573785..1574135) /locus_tag="B565_1426" /db_xref="GeneID:10487343" CDS complement(1573785..1574135) /locus_tag="B565_1426" /codon_start=1 /transl_table=11 /product="HIT-like protein/diadenosine tetraphosphate (Ap4A) hydrolase-like HIT family hydrolase" /protein_id="YP_004392078.1" /db_xref="GI:330829126" /db_xref="GeneID:10487343" /translation="MAQETIFSKIIRKEIPADILYQDDLVTAFRDIQPKAKTHILIIP NVLIPTVNDVEAEHELALGRMFTVARKLAAEAGIAEDGYRLIMNCNRHGGQEVYHIHM HLVGGQPLGPLLSL" misc_feature complement(1573815..1574126) /locus_tag="B565_1426" /note="Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a...; Region: PKCI_related; cd01276" /db_xref="CDD:29589" misc_feature complement(order(1573827..1573829,1573833..1573835, 1573845..1573847,1573851..1573853,1573872..1573874, 1574013..1574015,1574019..1574021,1574040..1574045, 1574049..1574051)) /locus_tag="B565_1426" /note="nucleotide binding site/active site [active]" /db_xref="CDD:29589" misc_feature complement(order(1573821..1573829,1573833..1573835, 1573839..1573841)) /locus_tag="B565_1426" /note="HIT family signature motif; other site" /db_xref="CDD:29589" misc_feature complement(1573833..1573835) /locus_tag="B565_1426" /note="catalytic residue [active]" /db_xref="CDD:29589" gene 1574400..1576400 /locus_tag="B565_1427" /db_xref="GeneID:10487344" CDS 1574400..1576400 /locus_tag="B565_1427" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004392079.1" /db_xref="GI:330829127" /db_xref="GeneID:10487344" /translation="MSDLSILQRVYLGFAILVAVMVASSLLTFRSQETLGNALEQVTQ QSMPLVIASSQTQITLLSANKWLGDVLTEQDPKQLPAEVAELKQAKAAVGKSLDVLRQ QVAHHPELQGEMSSLSQQVDSYLQLTDTLPGEHEALLTRLHKVNLAKGQFQVSLPQFK KSLGDMMVTIDDSFIKMLSETLTTKLSAIELSTMDALNQTIPAPIEGAFKRNKMQIEG FNSTIKDLQGELKNFENDMGHYVHGFVRDTTASEGVLSQYLALMKQQEQMREKSKQAS ALIVEIQNQLERITGQSQQLMSQSIQHAKVTQSQSTLTQGTSIVVAILIAMLVAYTLG KAIRRPLRELLRVLTEVTQGDMTQRIGFQSKNEFGQLGSQINLLIAQMGEVLAQLSQA SAQLNDAAHGNRYTTESVRADLEKQRQETASVAAAMTQMEASVREVAQAANQTLERVQ DVEKASEMGRKVMAGNITTTHQLAGKLQQTGKVIGDVSAMSSQIGNILDVIRGIAEQT NLLALNAAIEAARAGEQGRGFAVVADEVRSLAGRTAQSTSEIQTMIENLQQGVAKAVT VMQECSREMDSCVDQSSHANNAMEEVQGIVVLISDMSSQIASAAEQQQATSADIATNL NRISDISDLNYQGIERVAETSQQLDSLAEQQESLVKRFRLSA" misc_feature 1575069..>1575827 /locus_tag="B565_1427" /note="Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms]; Region: NarQ; COG3850" /db_xref="CDD:33640" misc_feature 1575354..1575542 /locus_tag="B565_1427" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 1575615..1576388 /locus_tag="B565_1427" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 1575756..1576391 /locus_tag="B565_1427" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1576473..1577348) /locus_tag="B565_1428" /db_xref="GeneID:10487345" CDS complement(1576473..1577348) /locus_tag="B565_1428" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392080.1" /db_xref="GI:330829128" /db_xref="GeneID:10487345" /translation="MKLFVRDLTVIDSSYLCERRGMVGESWLVDIEMSGELNEMSMLL DFGRVKKLIKSIIDEEVDHKLLVPTECPLIHVEALDGDESTVDLLRPGRSIHLRCPSQ GFAFIPAPQVDKESVTRYLLAVLAKRLPGNIKDLSLTLRQEAITGAFYHYSHGLKKHD GNCQRIAHGHRSPIEIHVDGERDQELELNWAERWGDIYLGTEEDKVALTELALSPRAN AQLGKHHCGFKYVAPQGLFQLAIPSAEVEMIDTDTTVELLACYIAREVKKMVGDKFVK IVAYEGVGKGAIAYT" misc_feature complement(<1577151..>1577279) /locus_tag="B565_1428" /note="Tunnelling fold (T-fold). The five known T-folds are found in five different enzymes with different functions: dihydroneopterin-triphosphate epimerase (DHNTPE), dihydroneopterin aldolase (DHNA) , GTP cyclohydrolase I (GTPCH-1), 6-pyrovoyl...; Region: TFold; cl00263" /db_xref="CDD:193736" misc_feature complement(<1576794..1576895) /locus_tag="B565_1428" /note="Tunnelling fold (T-fold). The five known T-folds are found in five different enzymes with different functions: dihydroneopterin-triphosphate epimerase (DHNTPE), dihydroneopterin aldolase (DHNA) , GTP cyclohydrolase I (GTPCH-1), 6-pyrovoyl...; Region: TFold; cl00263" /db_xref="CDD:193736" gene 1577429..1578772 /locus_tag="B565_1429" /db_xref="GeneID:10487346" CDS 1577429..1578772 /locus_tag="B565_1429" /codon_start=1 /transl_table=11 /product="dihydroorotase" /protein_id="YP_004392081.1" /db_xref="GI:330829129" /db_xref="GeneID:10487346" /translation="MNKLLIKNATLVNEGRIYASDVLIEGERIARIAPDIEAPDALVI DAAGRHLIPGMIDDQVHFREPGLTHKGTIASESRAAVAGGTTSFMEMPNVNPQTTTLD ALEAKYQIAANSSVANYSFYLGATNDNLEEIKRLDPKQSCGVKVFMGSSTGNMLVDNQ ETLAAIFRESPVMIVTHCEDTPTIAKAEEAARAKWGENVPMGEHGRIRSDEACYKSSS MAVALAKQYGAKLHVLHLTSAKELSLFTASHDLSELKDKNITAEVCVHHLFFNEADYE TQGSLIKCNPAVKSAADQQALLDAVRNDVLDIIATDHAPHTWEEKQNSYFKAPSGVPL VQHSLQALLELYHNGVFTLETIVKKTSHAVAERFQVQDRGYIREGYFADLVLLDLGKP YVVNDDNILYHCGWSPFNGYRFHSTVEMTLVNGQIAWQNGQVTDQILGKRLTFNR" misc_feature 1577429..1578769 /locus_tag="B565_1429" /note="dihydroorotase; Reviewed; Region: PRK09236" /db_xref="CDD:181716" misc_feature 1577438..>1577692 /locus_tag="B565_1429" /note="Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have...; Region: metallo-dependent_hydrolases; cl00281" /db_xref="CDD:193747" misc_feature 1577570..1578703 /locus_tag="B565_1429" /note="Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family; Region: DHOase_IIb; cd01318" /db_xref="CDD:30061" misc_feature order(1577603..1577605,1577609..1577611,1577957..1577959, 1578131..1578133,1578362..1578364) /locus_tag="B565_1429" /note="active site" /db_xref="CDD:30061" gene 1578885..1578961 /locus_tag="B565_t041" /db_xref="GeneID:10487347" tRNA 1578885..1578961 /locus_tag="B565_t041" /product="tRNA-Pro" /db_xref="GeneID:10487347" gene 1579178..1579609 /locus_tag="B565_1430" /db_xref="GeneID:10490026" CDS 1579178..1579609 /locus_tag="B565_1430" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392082.1" /db_xref="GI:330829130" /db_xref="GeneID:10490026" /translation="MLTLLLVGCATPYESEKSFWNGQTGFSQTRLGPDKWQLEFVGND LVDRETARKYVLKRAGELALAEGYSWLKVDELTINRDAVRVSPSRPIFGFDEDEPDLF MAQMQVQHTISALLTFRLLPRALDERTLNAKYLAEIKINSD" gene 1579814..1581073 /locus_tag="B565_1431" /db_xref="GeneID:10487348" CDS 1579814..1581073 /locus_tag="B565_1431" /codon_start=1 /transl_table=11 /product="proton/sodium-glutamate symport protein" /protein_id="YP_004392083.1" /db_xref="GI:330829131" /db_xref="GeneID:10487348" /translation="MKMNKLTVAILISMMFGILTGQGYRMFAADQAADFANNITILTD IFLRLIKMIIAPLVFTTLVVGIAKMGDTRTVGRIGAKTLGWFMLASLMSLSLGLVMVT LMQPGVGLSLSLPNDTASSGIAAGAITLKDFVTHAIPKSVVEAMATNEILQIVVFSLF FGLAAAALGDLAKPVVVLMASAAEIMLKVTGYVMNFAPFAVFGAIAAMVAKEGLGILV TYGSFMAQFYIALACLWLLLIAMGSVFLRGRVIKLLAMIREPILLAFSTASSEAAYPK TLDRLEKFGCDKRIASFVLPMGYSFNLDGSMMYCTFAVMFIAQAYGIELSMAQQITML LLLMVTSKGMAGVPRASLVVIAATLNQFHIPEAGILLLLGIDHFLDMGRSATNVLGNA IAASVVAKTEDSLGETVALGESEPAKA" misc_feature 1579829..1581028 /locus_tag="B565_1431" /note="Sodium:dicarboxylate symporter family; Region: SDF; cl00573" /db_xref="CDD:193876" gene 1581178..1582797 /locus_tag="B565_1432" /db_xref="GeneID:10487349" CDS 1581178..1582797 /locus_tag="B565_1432" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004392084.1" /db_xref="GI:330829132" /db_xref="GeneID:10487349" /translation="MNIARRLQLIALLVMLALVFLSWFSINRLGAGNRDLSYVTDNTV PSIALIKEVQAAFYELHSRVQSHILNTDNDKMQQIEADIAEHRKQINSQLEKYKAEML SNDEDRRLTDDDQRIIAQYYQEIDKVLQLSHQNKNDEARDMLAGEASRLFHQFAKAIE LHVNFNMDLGLALKKQGQENYDSSLQTLLFIAGGATVLTMGLFVWLFNQVANPLRTAM DTLTRIQRDLNFTLRADVKQQDEIGLTLNAVNRLLDTLQQTFTEFSVGSLQIKSTAES LSQAAQHLASSANQANDATSLIAAGVEEMTVSITDISQRTQETSRITNESGQLATEGG RTIERTVHAINEIADSIRQASAEVIALGEGISRIGGVVNVIRDVAGQTNLLALNAAIE AARAGESGRGFAVVADEVRKLAERTAQSTQEISATVEAIQQESNNTVSRMHLVEEKVS QGVTMATESGAIIAEIRSASHRVMEQVGEITNAIREQSSAAESIAHQVEQIAQVVQQT SSTAEETSAAAEELNVTTESIHQQISRYRIQ" misc_feature 1581250..1581720 /locus_tag="B565_1432" /note="Four helix bundle sensory module for signal transduction; Region: 4HB_MCP_2; pfam12729" /db_xref="CDD:193205" misc_feature 1581739..1581951 /locus_tag="B565_1432" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 1582099..1582794 /locus_tag="B565_1432" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1582861..1583463) /locus_tag="B565_1433" /db_xref="GeneID:10487350" CDS complement(1582861..1583463) /locus_tag="B565_1433" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392085.1" /db_xref="GI:330829133" /db_xref="GeneID:10487350" /translation="MQPWQPLLDLWFGDEADDVLRATRQAPLWWGKSSETDALLASRF GELAEAAAKGSLAHWADTPSGRLALILLLDQLPRNIHRNTPAAFAQDPLARDLCLKGL SIGADKSLSPLERVFFYLPLEHAESREQQARSVALFEALAAEQAGTPAQATFAGFTDF ARRHQVIIERFGRFPHRNDILGRTSTPEEAAFLQQPGSGF" misc_feature complement(1582870..1583445) /locus_tag="B565_1433" /note="Bacterial protein of unknown function (DUF924); Region: DUF924; cl01561" /db_xref="CDD:194164" gene 1583716..1583856 /locus_tag="B565_1434" /db_xref="GeneID:10487351" CDS 1583716..1583856 /locus_tag="B565_1434" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392086.1" /db_xref="GI:330829134" /db_xref="GeneID:10487351" /translation="MAGTSLLALLDDIASVLDDVALMTKVVVNKRETFFGKTFLTDIR NL" misc_feature 1583716..>1583805 /locus_tag="B565_1434" /note="Protein of unknown function (DUF808); Region: DUF808; cl01002" /db_xref="CDD:186297" gene 1583858..1584778 /locus_tag="B565_1435" /db_xref="GeneID:10487352" CDS 1583858..1584778 /locus_tag="B565_1435" /codon_start=1 /transl_table=11 /product="inner membrane protein YedI" /protein_id="YP_004392087.1" /db_xref="GI:330829135" /db_xref="GeneID:10487352" /translation="MAGTSLLALLDDIASVLDDVALMTKMAAKKTAGVLGDDLALNAE QVSGVRAERELPVVWAVAKGSFRNKLILVPAAIAISALVPWLITPLLMLGGAYLCFEG AEKLAHKFLPHEASEGEAHTAPIPDDLAAFEQQKVKGAIRTDFILSAEIIVIALGTVQ GASLALQLSVVAGIALLMTIGVYGLVGLIVKLDDIGLHLLQKHDGSALRRAVGQGLLV TAPRLMHLLALVGTIAMFMVGGGILVHGWPFAHHLIEGAAAVVATLPTVGAVLAAVTP TLLNAVAGVVAGLLLVVLMTLVSRLAPAKG" misc_feature 1583858..1584685 /locus_tag="B565_1435" /note="Protein of unknown function (DUF808); Region: DUF808; cl01002" /db_xref="CDD:186297" gene 1584902..1586698 /locus_tag="B565_1436" /db_xref="GeneID:10487353" CDS 1584902..1586698 /locus_tag="B565_1436" /codon_start=1 /transl_table=11 /product="oligoendopeptidase F" /protein_id="YP_004392088.1" /db_xref="GI:330829136" /db_xref="GeneID:10487353" /translation="MYQQQWNNDHIYPGLDSPELEADMNAARHALEELTSYMAGLDGV RDADVALLDFLREVRLRARDIRHVGWNVAILAACRGSQDARDPQAKQLASRARALNAD LFKTLAPVEDLMLALPEEEFAALMSDPLLGEEAYRLRHERRLQDQRLPVAAEQLVIGL GTDGLHAWGNLYNDLVGKIRLTIDGREMGLAEASNLLSSPIRALRLEAFDAISAGWEG EQETVAAILNALNGWRLELARQRGKTRVLDALDLSCHQSHIERATLDALMSETWRARG LGQRALGLMAERLGLDDLGPEDLFAPPPASSSRDISFDEAIELIADAFSRFDPEMGAF ARMMAEKGWIDAAPTPNRRTGAYCTKFAEPVEPRVFVTYAGTMDNVITLAHELGHAWH NWVIRDLPMSQRSYPMTLAETASIFAETLVRSALFEQAQSPEEQLAITWAEADGAATF LVNIPARFDFEQALVAERTQGYVSAERLKALTDEAWGRWYEGSLTRYHPMFWAAKAHF SIAGLGFYNYPYLFGYLFSLGVYQQLMSRKAAGEEGIAEAYRALLRDTGRMGAEDLVA KHLGQDIREAAFWQGSLAQVAQAVERFTQLPA" misc_feature 1584917..1586689 /locus_tag="B565_1436" /note="oligoendopeptidase, pepF/M3 family; Region: M3_fam_3; TIGR02290" /db_xref="CDD:162797" misc_feature 1584917..1586680 /locus_tag="B565_1436" /note="Peptidase family M3B Oligopeptidase F (PepF); Region: M3B_PepF_2; cd09607" /db_xref="CDD:189014" misc_feature order(1586054..1586059,1586066..1586068,1586135..1586137, 1586420..1586422,1586447..1586449,1586459..1586461) /locus_tag="B565_1436" /note="active site" /db_xref="CDD:189014" misc_feature order(1586054..1586056,1586066..1586068,1586135..1586137) /locus_tag="B565_1436" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:189014" gene complement(1586762..1588168) /locus_tag="B565_1437" /db_xref="GeneID:10487354" CDS complement(1586762..1588168) /locus_tag="B565_1437" /codon_start=1 /transl_table=11 /product="Purine permease ygfU" /protein_id="YP_004392089.1" /db_xref="GI:330829137" /db_xref="GeneID:10487354" /translation="MNETNPPSPRPGARKRPVDEVERMLPMGQLFTLGLQHVLVMYAG AVAVPLVIGGSLGLPKDQISYLISSDLFCCGIVTLLQCVGIGRFAGIRLPVIMSVTFA AVMPMLAIGANPDLGLTGIFGATIAAGIISTLLVPLIGRLMPLFPTVVTGVVITSIGI SIMQVGIDWMAGGKGNPEYGSLRYIGTSFLVLVFILLVTRFTKGFFSNISVLLGIIFG FVVAIAMGEVSLDGLGEAAWFAPIVPFAFGWPTFDPISIATLTVIMLITFIESMGMFL ALGDIVGHPARRGDIVRGLRVDGIGTIIGGIFNSFPHTSFSQNIGLVSVTGVSSRWVC VMSGGILLAFGLIPKMSVLVASIPPFVLGGAGIVMFGMVLATGIRILARTDYNSNRHN LYIVAISLGIGMIPTVSGNFFQQLPAQLQPLFHSGILLATISSVLLNLFFNGYQPDLT HQTRPLFVGPIKPQQEQA" misc_feature complement(1586945..1588087) /locus_tag="B565_1437" /note="Permease family; Region: Xan_ur_permease; pfam00860" /db_xref="CDD:189745" misc_feature complement(1586840..1588069) /locus_tag="B565_1437" /note="Sulfate transporter family; Region: Sulfate_transp; cl00967" /db_xref="CDD:193990" gene 1588674..1589213 /locus_tag="B565_1438" /db_xref="GeneID:10487355" CDS 1588674..1589213 /locus_tag="B565_1438" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392090.1" /db_xref="GI:330829138" /db_xref="GeneID:10487355" /translation="MIIYLHGFDATSPGNHEKVLQLQFIDDDVRFVHYSTVHPRHDMS HLLKEVKKQLDMSTDPKPLICGVGLGGYWSERIGFLCGIRQVIFNPNLHPEENMQGKI DRPEEYDDIGTKCVTEFRKKNSGNCLCILSVQDEVRDNRDTERELKNYYDIVWDERET HKFKNISHHLQRMKAFKEA" misc_feature 1588674..1589210 /locus_tag="B565_1438" /note="Uncharacterised protein family (UPF0227); Region: UPF0227; cl14886" /db_xref="CDD:196847" gene 1589288..1590580 /locus_tag="B565_1439" /db_xref="GeneID:10487356" CDS 1589288..1590580 /locus_tag="B565_1439" /codon_start=1 /transl_table=11 /product="respiratory NADH dehydrogenase 2; cupric reductase" /protein_id="YP_004392091.1" /db_xref="GI:330829139" /db_xref="GeneID:10487356" /translation="MMNIVVVGGGAGGLELATSLGRKLGKKNKAKITLVDRNRTHLWK PLLHEVATGSMDAGIDALSYQSHAKNHGFDFQLGTLTDIKRDDKRIVLAPIHDDNGDI VVNERELPYDYLVMAIGSVSNDFNTKGIKDNCIFLDSPSQAHRFHNSMMNRFLQFATE YQPGDKVKIAIVGGGATGVELSAELYNAVEQLYAYGFKNLTTDSLKVTLVEAGPRILP ALPERISGAAHQELVKLGVDVRTATMITEATSDGLHTKDGELIEADLMVWAAGIKAPD FMKDIAGLETNRINQLVVKETLQTTRDENIFVIGDCAACPQPDGKFVPPRAQSAHQMA SQAFKNILAKMNGGEMKPYLYHDHGSLVSLSRFSTVGSLMGNLMRGSMMVEGYIARLV YISLYRMHQIALHGYVKTGLIMLVGRINRVLRPTLKLH" misc_feature 1589288..1590544 /locus_tag="B565_1439" /note="NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; Region: Ndh; COG1252" /db_xref="CDD:31444" misc_feature 1589789..1590061 /locus_tag="B565_1439" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" gene complement(1590665..1591318) /locus_tag="B565_1440" /db_xref="GeneID:10487357" CDS complement(1590665..1591318) /locus_tag="B565_1440" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392092.1" /db_xref="GI:330829140" /db_xref="GeneID:10487357" /translation="MDDKMSEGQLAALLIWLVLLAFSLRRSLWQTLHDNPLYQHLLLG SAIALVPLWYLRAGLHEGLEVHFLGLTSLTLLLGWRLALLAPCLTLLVLGYFGVTNLA DFGWQALVGIALPVATSWLLFLASWAWLPRHLFVYIFIAAFLGGAITISVKVAASALL MGLSDSYPWHTITADYLSIWPLLLFPEALLNGMAMTVLAIYRPHWVNTFFDRTYLGK" misc_feature complement(1590674..1591225) /locus_tag="B565_1440" /note="Cobalt uptake substrate-specific transmembrane region; Region: CbiM; cl00397" /db_xref="CDD:185967" gene complement(1591394..1592044) /locus_tag="B565_1441" /db_xref="GeneID:10487358" CDS complement(1591394..1592044) /locus_tag="B565_1441" /codon_start=1 /transl_table=11 /product="pyruvate formate-lyase activating enzyme" /protein_id="YP_004392093.1" /db_xref="GI:330829141" /db_xref="GeneID:10487358" /translation="MRCKYCHNRDTWDTEGGREVTVPELMSDITSYRHFMNASGGGVT ASGGEAMLQPAFITELFTACKEKGIHTCLDTNGFVRHLDEQVDKLLDQTDLVLLDIKQ INDEKHIPLTHVSNRYTLEFARYLAAKGKTMWIRYVVVPTWSDDDESAEGLGQFIAEL GESVEKVELLPYHELGKHKWDVLGDPYELSGIKPPSKETMERVKGILGKYHNNVKY" misc_feature complement(1591604..1592044) /locus_tag="B565_1441" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene complement(1592257..1595193) /locus_tag="B565_1442" /db_xref="GeneID:10487359" CDS complement(1592257..1595193) /locus_tag="B565_1442" /codon_start=1 /transl_table=11 /product="PAS:GGDEF domain-containing protein" /protein_id="YP_004392094.1" /db_xref="GI:330829142" /db_xref="GeneID:10487359" /translation="MSSTALSHLPPALQTPLFFRLDLRSQRLVALTDVMQTPLYWLDE PRAPWPAQLPDALRLPIEQLLANGHGGKITVRFAGQLWHIALAHEQDGFWLICLQNLR QEPIADLALQLPRLSQMASQQQYAPLLEALKESLGADRLILWHYQANGDLGSEQLTPV FTLGVEALYPIRGDSRYIRALRTRKALSFSEAAHQPMLSNHLYLTSAGVRSRLDGALL EQDKLFGVLSLEYLDPTPLSEEMLQLVRSSAQLLGHWQPQPEEHRAELALPPELHQQT GIDYCKTLVSWAMSASGARVGWIGEFQPRGQDLWIIPRCVINEEICSILKPIQLDPGP AQELFQHGQAIYVEDLPVRYPKATRLLALNASAYIGIPLHGQSGAPIGQITLLLDTPL EEPEQLLDLLSSQHERAAIELKRLATDDALRLAEVAFNTHDGLIVMDHNGIILKVNHS FSRITGFGEVEVIGHSIRKLRPTYYGDHLKEDVSRTVNEQEFWLGEERCLHKDGHLFP VRLMVNGVKDEQGELSHFICSFYDITQEKEAARHIEQLAYYDDLCGLHNRRSLNHILQ QTLSASNGQWGALLLVDLDNFKSINDSLGHACGDLLLQAVVQRFRELPQDNLVQARIS GDEFALLFTQLGQGEVTAKILAEHFARELMGLFRTPFDIGDHKLHCSASVGISLFSGN ETDHLVLMQQADTATHMAKRAGQGHYVFFSEAMAQHEKNRLTLTNELRDALRHHELQL HYQPQYRVDNGSLSGIEALLRWQRSDGTMVPPGEFIPIAEETSLILEIGYWVMKTACA QYSFWLNRGLQIPHLSVNVSARQFHTQGFVQQVEYILRDTGVPPSRLLLEVTESVVLE NRQESIARMRQLKELGILISIDDFGTGYSSLAYLRDLPADEVKLDRSFIQTLVHSEQD RAIVKAILDLAQVFRFTVTAEGVEEEAQLAILKALGCQHYQGFLTSRPLTVKGLEQLL GSRAPD" misc_feature complement(1594435..1594830) /locus_tag="B565_1442" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" misc_feature complement(1593595..1593906) /locus_tag="B565_1442" /note="PAS fold; Region: PAS; pfam00989" /db_xref="CDD:144544" misc_feature complement(1593595..1593903) /locus_tag="B565_1442" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(order(1593682..1593684,1593697..1593699, 1593775..1593786,1593823..1593825,1593841..1593843, 1593853..1593855)) /locus_tag="B565_1442" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(1593655..1593657,1593661..1593663, 1593745..1593750,1593757..1593759,1593781..1593783, 1593793..1593795)) /locus_tag="B565_1442" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(1593067..1593552) /locus_tag="B565_1442" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(1593316..1593318,1593445..1593447)) /locus_tag="B565_1442" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(1593313..1593324,1593328..1593330, 1593394..1593396,1593406..1593408,1593418..1593423, 1593430..1593432)) /locus_tag="B565_1442" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(1593238..1593240,1593343..1593345)) /locus_tag="B565_1442" /note="I-site; other site" /db_xref="CDD:143635" misc_feature complement(1592305..1593015) /locus_tag="B565_1442" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:30163" gene 1595329..1597017 /locus_tag="B565_1443" /db_xref="GeneID:10487360" CDS 1595329..1597017 /locus_tag="B565_1443" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase" /protein_id="YP_004392095.1" /db_xref="GI:330829143" /db_xref="GeneID:10487360" /translation="MKRILIIGGVAGGASAAARARRLSEEAEIVMFERGEFVSFANCG LPYHIGGDIPDRDALLLQTPQSFKRRFNVDVRVFHDVIEIDKAGKTLLVRNLQTGEEQ REHYDVLLLSPGAAPIRPPFPGIDSPHVYTLRNIPDMDRILAALHHDQPRHVTVVGGG FIGLEMMEALHQRKLDVTLLELADQVMAPVDKEMANMLHARIREEGIDLRLRTGLTAI ESLDLPAEKTSAVSTAKSGGLRLTLNDGSHLDTGLLILAIGVKPETLLAAKAGLELGP RGGIKVDAEMRTSDPFIYAVGDAVEEIDFVTGESVLIPLAGPANRQGRIAADNMLGRS ETYKKTQGTAICKLFDLAVASTGLNEKRLVQLGLPFEKVYVHPGSHAGYYPGAHPVSL KLLFAPDGKIYGAQAIGKDGIDKRIDVLAVAQRAGLTVFDLQDLELTYAPPFGSAKDV INMAGFVASNHLKGDTLLCHVAEVQARNPHQLVVDVRNGPELDKLGRIPGALHIPLDE LRGRLHELPKEKELLISCQVGLRGHVACRLLSQHGFKVKNLSGGFKTWQMAIAE" misc_feature 1595416..1596693 /locus_tag="B565_1443" /note="CoA-disulfide reductase; Region: CoA_CoA_reduc; TIGR03385" /db_xref="CDD:163244" misc_feature 1595785..1595985 /locus_tag="B565_1443" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 1596355..1596669 /locus_tag="B565_1443" /note="Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Region: Pyr_redox_dim; pfam02852" /db_xref="CDD:190451" misc_feature 1596769..1596999 /locus_tag="B565_1443" /note="Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-...; Region: RHOD_Pyr_redox; cd01524" /db_xref="CDD:29087" misc_feature 1596904..1596906 /locus_tag="B565_1443" /note="active site residue [active]" /db_xref="CDD:29087" gene 1597233..1597892 /locus_tag="B565_1444" /db_xref="GeneID:10487361" CDS 1597233..1597892 /locus_tag="B565_1444" /codon_start=1 /transl_table=11 /product="DedA family membrane protein" /protein_id="YP_004392096.1" /db_xref="GI:330829144" /db_xref="GeneID:10487361" /translation="MLDMLMAIWHQDFDALVQMQAVPLLISCLMLVLLLESAFVFLPL PGDSLVLLAGGLVGMGVFGPEVTLVYLPLAAGIGSVLAYWQGRALQRTRFMDHIERML PPDSLPKATRLLKKYGFLAMFSSRFIPFVRVLTPMLMGIGRLSVLRMCVASFASAFMW ALCLSLVGKLAMNTPFFLHHSELLTRALLITSLVLFLAAVMAILFRWFKGGAKNETSH D" misc_feature 1597422..1597736 /locus_tag="B565_1444" /note="SNARE associated Golgi protein; Region: SNARE_assoc; cl00429" /db_xref="CDD:193815" gene 1598058..1602941 /locus_tag="B565_1445" /db_xref="GeneID:10487362" CDS 1598058..1602941 /locus_tag="B565_1445" /codon_start=1 /transl_table=11 /product="alpha-2-macroglobulin" /protein_id="YP_004392097.1" /db_xref="GI:330829145" /db_xref="GeneID:10487362" /translation="MRLFDSPSASHRSTAGTGALRRRCSALLLCGVVGLMSGCGPDKP ASQVPTTESTALQEAGAPTSVVQANARQYRDAPALALVFSGPLAPKANWQSWLGVSEG GKQVQGEWILADDGRTLYFPNVQPDKSYEVSLKAGLGPSPQSWTLKTRPLEAGASFTA SGMVLPLRQELRLPISAVNVDEVNIDFFRVDAEYLPRFLAEYRPGAGMGNWELEQITK RAKRVFSGRYALELDANRRETRLINVKEPQLAEAGVYFAVMSPLGNYDWRKETTYFAV SDMGVSARRYRDQLEVFVSSLASADPLKDVQLSLLDEKGNRLQVQTTDPQGHRRFDQV QGARLLLAEQGNHLAVLRLDGAALDLSTFDLGTQPWQAQQLYLFSGRDLYRPGERLDS EILLKGQDGQLLPGMVVELEVKQPDGQLLEQKRLLPDNLGAAHYGLRLPDDAPLGRWT INLKTAAGSRFEWPFLVEEFLPERLKLQLGKGPDGEVTDLDASLTLPLQGDYLYGAPA SATKAKAEVKISRATMPFTQWQEFTLGDVLLTEQAKELEARSLTLDAQGQGTFSLADE LDGVRALGPLEVAYRVSLSEPGGRAVNRSRTQYGWPAGSQWPALKADFVADRVEGGKP LPFQILNLDEQGQPVAGAVKVRLINEYRDYYWHYADGEGWKYEFNSQPYLEQEQTLQL DGKGPTPLTLQLAAGWYRLEVENSQGHQSSLRVEIGSYAWGGGGEQARPDKIAITLDK RAYQAGDKAKVTLVAPRPGKGLLLVEDGDGLRWWQRIELKGAGGDAKDARGEFDIPVR PEWQRHDLHISAQIAAPDSASKPVSSQQGQSLRSVGLVPLTLDREARRLPLTLSAPDK AVPLTRLEVTATSTPNSQGRVVLAAVDRGVLNISDYQPLDPFEIFFGRKRFAQDLFDN YGQVIPPQDGKLARLNYGGDRAPLKKGGALESRVEIAALWSGEVSFDQQGKAVIPLDL PNFNGELALMALAWNEQQVGEAERAVKVVAPLVAEIGWPRFGARGDETRALVQLRNMS GEDQTLSLVWTLNGGLKANGELPRTLALKNGEEQWLTLPLTVTGASGVASLQLAASGK DFAISRDWTLPLRSPWPAETRQRYQMLAPGQQMSFAPAELTGLDRANLQGLLSLSGTP PWDPAAQWQALADYPYACLEQTLSRAWPYLLTTADERAAWSKPAEGKKAASEADVQRA LLQRLQRLQLPSGGFGLWDGRSDEEQWLTAYAADYLLARKEAGDAVPEAMLNQALNRL QSYLTDSQYGERWSSAPEHSRLAYQAYSAYVLARVGKAPLATLRLIWEQQADHARSGL PLLHLSLALSAMGDEQNAAKALSRALATERGDEYLGDYGSPLRDEALEFSLLRQHKLA VERWPALSAKVADTLAHRQWLSTQERLALLRLARFDPAADWQAKVTSSLGSGSLSGSA PLQQGAPEALAASSVTNEGRGALYVQRTLVGYPEQAPARISKGMSVTRSWFNSDGQPF DPAKVKVGDLVVVRLNVSSESAVPDALLVEMVPAGFELENPALGNSIKLEELSIEGKP AWQSEWNDYLKHQEFRDDRYTAALDLSEGSNQQLVYLMRAVTPGRYQVPPTQVEDMYR PELRAVGEDIHEVRISE" misc_feature 1598169..1602908 /locus_tag="B565_1445" /note="Large extracellular alpha-helical protein [General function prediction only]; Region: COG2373" /db_xref="CDD:32520" misc_feature 1599180..1599458 /locus_tag="B565_1445" /note="MG2 domain; Region: A2M_N; pfam01835" /db_xref="CDD:190129" misc_feature 1600257..1600724 /locus_tag="B565_1445" /note="Alpha-2-macroglobulin family N-terminal region; Region: A2M_N_2; pfam07703" /db_xref="CDD:191819" misc_feature 1601520..1602296 /locus_tag="B565_1445" /note="Proteins similar to alpha2-macroglobulin (alpha (2)-M). Alpha (2)-M is a major carrier protein in serum. It is a broadly specific proteinase inhibitor. The structural thioester of alpha (2)-M, is involved in the immobilization and entrapment of...; Region: A2M_like; cd02891" /db_xref="CDD:29790" misc_feature order(1601547..1601549,1601553..1601558,1601565..1601567, 1601691..1601693,1601721..1601723,1601730..1601732, 1601865..1601867,1602249..1602251) /locus_tag="B565_1445" /note="surface patch; other site" /db_xref="CDD:29790" misc_feature 1601547..1601558 /locus_tag="B565_1445" /note="thioester region; other site" /db_xref="CDD:29790" misc_feature order(1601844..1601846,1601850..1601852) /locus_tag="B565_1445" /note="specificity defining residues; other site" /db_xref="CDD:29790" gene 1603000..1605339 /locus_tag="B565_1446" /db_xref="GeneID:10487363" CDS 1603000..1605339 /locus_tag="B565_1446" /codon_start=1 /transl_table=11 /product="Penicillin-binding protein 1C" /protein_id="YP_004392098.1" /db_xref="GI:330829146" /db_xref="GeneID:10487363" /translation="MGRCGHAGWRWLGGLPRWLRFSVLGVVALLLSLLALDRIFPPPP LDPAYARVVLDMKGRPLRAFADTSGVWRYPVTLEQVSPRYIEALLGYEDRYFWRHPGV NPVAMVRGVWQWLRYGRAVSGGSTLTMQVARLIEPYHRSVPGKLRQMARALQLEWHYD KRTLLTVYLNRAPFGGNLEGVQAASFAYLGKSAAKLTYAEAALLAVLPQAPSRNRPDR HPERARAARDKVMQRLVAQGVWPEQVWLEGRIEPVLARGHFTPMEAPLFARLAADNQA GALVHTTIDGDLQRWLEGRVASYIRRFPEQTSAALLLVDNKTMAVRAYVGSAEYGNLR RHGYLDMVQAIRSPGSTLKPFIYGLAMDEGLVHSASLLSDAPRLGSDYRPANFSGAFQ GPVTLAQALQQSLNVPAVQVLEALGPDKLVSRLDNAGVRLALSDKPNPAIALGAAGIR LEQLVALYSSLTRQGQVAMPVWLAGQQAVSRPLLSPGAAWIIWQILSAQGRADQPFAS EATGRVNRLAWKTGTSYGYRDSWAMGVSGRWTIGVWLGRPDGTPMPGFYGQSAAVPLL LSVYSRLSDNSPLPAQPNTVSEAEVCWPLGRKASATLPEACLQRQSAWLLEGRDPPTL PDPMDWPSPLRQVALTAEGKPTLTCCHDAAKSGFRALWPLSLEPWRSPGERRQALLAS GCAGEGQSAELQAPIRIVALGEGNLIRSQRYRLQPKVLGGVGKPAWFLNGQRLRWDGD QVLSVAGRYQLVVVDEAGNSDRIEFRVVHPDGDAGTITR" misc_feature 1603015..1605303 /locus_tag="B565_1446" /note="penicillin-binding protein 1C; Provisional; Region: PRK11240" /db_xref="CDD:183049" misc_feature 1603168..1603704 /locus_tag="B565_1446" /note="Transglycosylase; Region: Transgly; cl07896" /db_xref="CDD:195645" misc_feature 1603924..1604697 /locus_tag="B565_1446" /note="Penicillin binding protein transpeptidase domain; Region: Transpeptidase; cl01039" /db_xref="CDD:154162" misc_feature 1605055..1605294 /locus_tag="B565_1446" /note="Penicillin-Binding Protein C-terminus Family; Region: BiPBP_C; pfam06832" /db_xref="CDD:148440" gene 1605462..1605710 /locus_tag="B565_1447" /db_xref="GeneID:10487364" CDS 1605462..1605710 /locus_tag="B565_1447" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392099.1" /db_xref="GI:330829147" /db_xref="GeneID:10487364" /translation="MLRVLCPLLVLMSSGCATTNHGDHHVSPERTGFYSPFEPVSESF VRCYQKQFACTPANIRRDRAMEARRQAQEQANHRGDDW" gene complement(1605766..1606731) /locus_tag="B565_1448" /db_xref="GeneID:10487365" CDS complement(1605766..1606731) /locus_tag="B565_1448" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392100.1" /db_xref="GI:330829148" /db_xref="GeneID:10487365" /translation="MKTYIYYPGMEVRDELWLKFALLYLERLAFVFTVSEKSGLTALL DTLQQQTDLLAERPDAAFFAAITPQLESQISGLVAPDFVRHKVFGNKELIGRWRQEAN HDCFCPDQVGLERLHGFCLTHSFATRDEGGIRMARRFANLISMRLAREWALANDGALI TDHDYLDRLLHLLESRYHNRGGQDCFLLEIPLQVPTHLADIPFAELIALRGRSGFRQQ LAEFHLALDNLLTMLGSGYADPAALTRFEQAQQGLNQLLGPETLSMPLTTLVSTSLPA VAMLHQLKASHPESHLIFHPIKKSHFHQRKSQHFFTRLGHLRQPG" gene 1606909..1608357 /locus_tag="B565_1449" /db_xref="GeneID:10487366" CDS 1606909..1608357 /locus_tag="B565_1449" /codon_start=1 /transl_table=11 /product="tRNA sulfurtransferase" /protein_id="YP_004392101.1" /db_xref="GI:330829149" /db_xref="GeneID:10487366" /translation="MKFIIKLFPEITIKSKSVRQRFIKILQGNIRNVLRRFDDDARVR MDWDKLIVSSRNDQFREQAIEALACIPGIQAFLEVQASKFTDLHDIFEQVKAVWGDQL KGKTFCVRAKRHGKHEFSSLEVERYVGGGLNQHCESNGVRLKNPDVKINLEIDGEELF IVSAIHQGLSGMPIATQEDVLSLLSGGFDSGVASFQFIKRGCRVHYCFFNLGGAAHEI GVKQVAYHLWNRFGSSHRVRFTAVDFEPVVAEILEKIDNGQMGVVLKRMMMRAAAKVA DEFQIPALVTGECVGQVSSQTLTNLNVIDRVTDKVILRPLITWDKPDIISEARRIGTL EFAETMPEYCGVISKKPTVKAELSRIEEEEANFDFSILDKVVSEARYLDIRRIGEETA AEVQEVETTQVLGADEVILDIRSADEHDEKPLVVEDREVLHIPFFKLATAFGDLPKEK TYLLYCDRGVMSKLQALYLKEKSFDNVKVYRP" misc_feature 1606909..1608354 /locus_tag="B565_1449" /note="tRNA s(4)U8 sulfurtransferase; Provisional; Region: PRK01269" /db_xref="CDD:179268" misc_feature 1607161..1607391 /locus_tag="B565_1449" /note="THUMP domain; Region: THUMP; cl12076" /db_xref="CDD:159736" misc_feature 1607446..1607958 /locus_tag="B565_1449" /note="ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway. It belongs to the Adenosine Nucleotide Hydrolysis suoerfamily and predicted to bind to Adenosine nucleotide; Region: ThiI; cd01712" /db_xref="CDD:30167" misc_feature order(1607455..1607463,1607467..1607478,1607533..1607535, 1607539..1607541) /locus_tag="B565_1449" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30167" misc_feature 1608121..1608351 /locus_tag="B565_1449" /note="Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins...; Region: RHOD; cd00158" /db_xref="CDD:29073" misc_feature 1608274..1608276 /locus_tag="B565_1449" /note="active site residue [active]" /db_xref="CDD:29073" gene complement(1608434..1608784) /locus_tag="B565_1450" /db_xref="GeneID:10487367" CDS complement(1608434..1608784) /locus_tag="B565_1450" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392102.1" /db_xref="GI:330829150" /db_xref="GeneID:10487367" /translation="MTAAHAEAQVVFGRLASAPVQQFNQQIRQASHQQQNWVNDYREV ALRFVGHGDTPSRIHAQQLDNDLVLSVALDGSKSDMIYILTLYRSNNLWQMREAEMGW RCQGQDSFTPVPCP" gene complement(1608927..1609559) /locus_tag="B565_1451" /db_xref="GeneID:10487368" CDS complement(1608927..1609559) /locus_tag="B565_1451" /codon_start=1 /transl_table=11 /product="inner membrane protein YadS" /protein_id="YP_004392103.1" /db_xref="GI:330829151" /db_xref="GeneID:10487368" /translation="MQTLVEQIVYISDMFGTAVFAFSGVLVAGRLRMDGFGVMVLAAV TAIGGGTIRDMILGATPVFWVRDPLYIWVVIATALIGMWMVKLPRRMPWYVLPVADAF GLALFTVIGAQKALNFGTPGLIAVIMGTMTGVAGGMIRDVLAREVPMVLQKEIYATAC ILGGILYTLALEANMDRVTAMLICMTAVFGLRVAAIYWHLSLPTFSLQRN" misc_feature complement(1608930..1609538) /locus_tag="B565_1451" /note="hypothetical protein; Provisional; Region: PRK10578" /db_xref="CDD:182564" misc_feature complement(1609299..1609535) /locus_tag="B565_1451" /note="UPF0126 domain; Region: UPF0126; pfam03458" /db_xref="CDD:146214" misc_feature complement(1609053..1609274) /locus_tag="B565_1451" /note="UPF0126 domain; Region: UPF0126; pfam03458" /db_xref="CDD:146214" gene 1609933..1610793 /locus_tag="B565_1452" /db_xref="GeneID:10487369" CDS 1609933..1610793 /locus_tag="B565_1452" /codon_start=1 /transl_table=11 /product="flagellin-like protein" /protein_id="YP_004392104.1" /db_xref="GI:330829152" /db_xref="GeneID:10487369" /translation="MSMYVNTNVSSINSQRNLYNTNKALDTAYQRLSSGLRINTAKDD AAGLQISNRLTSQINGLNQGNRNANDGISLAQTAEGAMEEITGMFQRMRVLAEQSANG SNTNADRSAIQQEVRQLATEINRIAKDTTFGGTKLLDGAYKGIFQVGADAKQTISFTL SQAGGFSISGLGAAASVATVFGTAATLSVSTQSNAQSVLGAVDKMIARVDSKRAELGA IQNRMESTIRNQANIAENVSAARSRIRDADFAQETATLTQYNILQQAASTVLGQANQR PNGALQLLRG" misc_feature 1609933..1610784 /locus_tag="B565_1452" /note="flagellin; Provisional; Region: PRK12802" /db_xref="CDD:139237" misc_feature 1609945..1610361 /locus_tag="B565_1452" /note="Bacterial flagellin N-terminal helical region; Region: Flagellin_N; pfam00669" /db_xref="CDD:144315" misc_feature 1610527..1610757 /locus_tag="B565_1452" /note="Bacterial flagellin C-terminal helical region; Region: Flagellin_C; pfam00700" /db_xref="CDD:144340" gene 1611538..1612341 /locus_tag="B565_1453" /db_xref="GeneID:10487370" CDS 1611538..1612341 /locus_tag="B565_1453" /codon_start=1 /transl_table=11 /product="flagellin-like protein" /protein_id="YP_004392105.1" /db_xref="GI:330829153" /db_xref="GeneID:10487370" /translation="MNTNKALDTAYQRLSSGLRINSAKDDAAGLQISNRLTSQINGLN QGNRNANDGISLAQTAEGAMEEITGMFQRMRVLAEQSANGSNTTADRSALQQEVKQLA TEINRIAKDTTFGGTKLLDGSYKGVFQVGADAKQTISFSLTQANGFNISGIAAAASAG AAFATLAAINITSQSNAQSVLGAVDKMIAGVDRKRAELGAIQNRMESTIRNQANIAEN LSSARSRVRDADFAVETAALTQYNILQQAASTVLAQANQRPNGALSLLR" misc_feature 1611538..1611912 /locus_tag="B565_1453" /note="Bacterial flagellin N-terminal helical region; Region: Flagellin_N; pfam00669" /db_xref="CDD:144315" misc_feature 1611553..1612335 /locus_tag="B565_1453" /note="flagellin; Provisional; Region: PRK12802" /db_xref="CDD:139237" misc_feature 1612078..1612308 /locus_tag="B565_1453" /note="Bacterial flagellin C-terminal helical region; Region: Flagellin_C; pfam00700" /db_xref="CDD:144340" gene 1612582..1613385 /locus_tag="B565_1454" /db_xref="GeneID:10487371" CDS 1612582..1613385 /locus_tag="B565_1454" /codon_start=1 /transl_table=11 /product="flagellin-like protein" /protein_id="YP_004392106.1" /db_xref="GI:330829154" /db_xref="GeneID:10487371" /translation="MNTNKALDTAYQRLSSGLRINSAKDDAAGLQISNRLTSQINGLN QGNRNANDGISLAQTAEGAMEEITGMFQRMRVLAEQSANGSNTNADRSALQQEVKQLA TEINRIAKDTTFGGTKLLDGTYKGVFQVGADAKQTISFSLTQANGFSISGINAAASAA GGFASIATLSISTQDNAQSVLGAVDKMIAGVDRKRAELGAIQNRMESTIRNQANIAEN LSSARSRVRDADFAVETATLTQYNILQQAASTVLAQANQRPNGALSLLR" misc_feature 1612582..1612956 /locus_tag="B565_1454" /note="Bacterial flagellin N-terminal helical region; Region: Flagellin_N; pfam00669" /db_xref="CDD:144315" misc_feature 1612597..1613379 /locus_tag="B565_1454" /note="flagellin; Provisional; Region: PRK12802" /db_xref="CDD:139237" misc_feature 1613122..1613352 /locus_tag="B565_1454" /note="Bacterial flagellin C-terminal helical region; Region: Flagellin_C; pfam00700" /db_xref="CDD:144340" gene 1613923..1615323 /locus_tag="B565_1455" /db_xref="GeneID:10487372" CDS 1613923..1615323 /locus_tag="B565_1455" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein 2" /protein_id="YP_004392107.1" /db_xref="GI:330829155" /db_xref="GeneID:10487372" /translation="MASISSAGVGSNLPLNDLIQAELSAKKTQFERRIVGRETRLNSN LSGIGQLKSAISTFNSALQKLAKPADFSGNKVTIGQSADNQLLAFTATNKANTGNYNI AVKQLATGSSFISADNAFTSSSDIATSSAGTLTFSAGGKTLNVDLAANDTLLDMRNKI NSASNNFGVSANIINVDGKSRLVIESSVSGQGNDLQVAASNADLQRFSTSDPASVMGS QKNAKDAIVEIDGLEVNSATNKFDNVIQDTSFTVLQLSEKDAANNYKTTKVTVEQDKG KTKENIEAFVKSYNALMDTMDTLGKRPTIVGGERLGDSGPLAGDQTLNGVKSLLFKEL SLSTVDNDSLFNVGINIDKKGRLSIDNAKLTKVMDENFGKLESVFSGETGLAKRLDSQ LNEYTKSAGSLDKRRDSLERDVRSIKQERVDFDAYLTKYEEGLRQKYARLDVLVARMN SSMGSLTTLVNMNKKS" misc_feature 1613923..1615299 /locus_tag="B565_1455" /note="flagellar capping protein; Reviewed; Region: fliD; PRK08032" /db_xref="CDD:181203" misc_feature 1613950..1614258 /locus_tag="B565_1455" /note="Flagellar hook-associated protein 2 C-terminus; Region: FliD_N; pfam02465" /db_xref="CDD:190316" misc_feature 1614319..1614483 /locus_tag="B565_1455" /note="Flagellin hook IN motif; Region: Flagellin_IN; pfam07196" /db_xref="CDD:148666" misc_feature 1614586..1615275 /locus_tag="B565_1455" /note="Flagellar hook-associated protein 2 C-terminus; Region: FliD_C; pfam07195" /db_xref="CDD:115824" gene 1615348..1615770 /locus_tag="B565_1456" /db_xref="GeneID:10487373" CDS 1615348..1615770 /locus_tag="B565_1456" /codon_start=1 /transl_table=11 /product="flagellar protein FliS" /protein_id="YP_004392108.1" /db_xref="GI:330829156" /db_xref="GeneID:10487373" /translation="MYNKSLGVYKKNSLEAELSVADPHKVIQLLMQGFLERVAQAKGA IERSDYQLKSDRISSANAILNGLKDSLDMSQGEISERLFSLYEYMGERLLDASVKMEV SPLDESMKLMLMIKESWDKIPDQEKQKAYTIRQSLGDL" misc_feature 1615348..1615734 /locus_tag="B565_1456" /note="Flagellar protein FliS; Region: FliS; cl00654" /db_xref="CDD:193900" gene 1615839..1616081 /locus_tag="B565_1457" /db_xref="GeneID:10487374" CDS 1615839..1616081 /locus_tag="B565_1457" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392109.1" /db_xref="GI:330829157" /db_xref="GeneID:10487374" /translation="MESESFDTLDELFDEREAIISSLYFANGWEERHLEQLDSILNAS IIVKKKLEEAKQIVQKEVFSISKKNKAINHYKANEI" gene 1616112..1618214 /locus_tag="B565_1458" /db_xref="GeneID:10487375" CDS 1616112..1618214 /locus_tag="B565_1458" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392110.1" /db_xref="GI:330829158" /db_xref="GeneID:10487375" /translation="MIKPEEILAKITQDAERIMLQAEQEKAMAEVLPIRFEQNMVAFS KYIPSIHKAFINYKVQREFRFFCTENGIPNLAWIDENVAIYGDDPYYQCQQQIKHMMS SSASGGIRFGTEKNFFNQIHIDYLNQLAELLAKKRSEYSPLQQVPESMPFMMMFGVGL GYQLGYLYETCKVANLFVFEPDLDLFYASLYAFDWASLLDYIMAENLRLHIFLGQDQD NLMNDALHAIHKAGPFIAAAPVGLVHYPSEIIEHLVAKMKKEFFLFTMGWGFFDDNML ALSHSVENISKGIPFLVKGKSLPNKYNTVPVFIIGNGPSLDATIPYIKENKNKAILIS CGSSISALHKEGIKPDIYVTIERTKAVPDFIALINDEDYLKDILYISTDLTHPDCHQF FRRSLLAFKPNEPMLSLASINFEEIQGFDYFSHVNPLVGNTGISVAARLGFKEIYLFG IDNGHYDSEHHHSRLSSYYDDNGAPIAALQRLATAGSDQVIPGNFGGEVISSKMFVTS IRVMERLIREYSGTNFFNTSHGAKIEGADALDIKENQFGELPISFNKIDIIEFIAAEV FKPLNIDRSRVASALDVDYFNFFIDKVLLEWKEPLLSRADVVNRMMRQFEYLLMIENS RQCHISRVLIGTFNYLFSFLITFCHAFADEEETLEAVSDALEIFNAYLLKAKELYPQA LDSPDKVDCEIISLYRSN" misc_feature 1616946..1617482 /locus_tag="B565_1458" /note="Thiamine pyrophosphokinase; Region: TPK; cl09135" /db_xref="CDD:195801" gene complement(1618549..1618731) /locus_tag="B565_1459" /db_xref="GeneID:10487376" CDS complement(1618549..1618731) /locus_tag="B565_1459" /codon_start=1 /transl_table=11 /product="short chain dehydrogenase" /protein_id="YP_004392111.1" /db_xref="GI:330829159" /db_xref="GeneID:10487376" /translation="MAYVNDSRFRINLVSPGGLFDNQSEIFSQAYKKQTCGKGMLDIS DVVGSIIFYYQTNQDM" misc_feature complement(1618576..>1618728) /locus_tag="B565_1459" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene complement(1619331..1620371) /locus_tag="B565_1460" /db_xref="GeneID:10487377" CDS complement(1619331..1620371) /locus_tag="B565_1460" /codon_start=1 /transl_table=11 /product="transposase IS116/IS110/IS902 family protein" /protein_id="YP_004392112.1" /db_xref="GI:330829160" /db_xref="GeneID:10487377" /translation="MNITTIGIDLAKSCIQVHCVDVHGKRILNKKLKREQVVPFFSNR PACLIGMEACGSAHFWANKLQALGHTVKLMAPQFVKPYVKTNKNDAADAEAICEAVSR PNMRFVPIKNSEQLAVLAMHRARQGFVKARTAQANQLRGLLAEHGIIIPKGIRHINQH LPDILEAGDNGLPGRFRQLLDRLSAHFKELDKQVRELDVQLQSWHQDSPASQKLAKIP GIGPLTASALVATIGDAKQFQNGRQLAAWLGLVPRQHSSGGKPTLLGISKRGDTYLRT LLIHGARAVLRVVKSKAQHAGSWLEGVMARRNHNVAAVAQANKTARIVWALLANDREF DAQYSTGTILAA" misc_feature complement(1619388..1620362) /locus_tag="B565_1460" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG3547" /db_xref="CDD:33349" misc_feature complement(1619907..1620182) /locus_tag="B565_1460" /note="Transposase; Region: DEDD_Tnp_IS110; pfam01548" /db_xref="CDD:190030" misc_feature complement(1619511..1619732) /locus_tag="B565_1460" /note="Transposase IS116/IS110/IS902 family; Region: Transposase_20; pfam02371" /db_xref="CDD:190292" gene complement(1620386..1621336) /locus_tag="B565_1461" /db_xref="GeneID:10487378" CDS complement(1620386..1621336) /locus_tag="B565_1461" /codon_start=1 /transl_table=11 /product="putative transposase tnpR391B" /protein_id="YP_004392113.1" /db_xref="GI:330829161" /db_xref="GeneID:10487378" /translation="MGTPLQPITNWPTYNKSLINRGSLTFWVDAEAMSNWFHHDHHGR RGRSQLYTDQSICTFLMLKGIFNLSLWATQGLFDSLLELMNVPLCAPDYSCVSKRAST VKVAYRQPPKSKVTDLVIDSTGLKVFGEGEWKVRKHGHDKRQVWRKLHLAVDPATYDI VAAEASLENVHDAEVLPTLFNPLRRALGTVYADGAYDTKTCHELIKRKGAKACIPPRK NAGLWEEGHPRNEAVLVMRKEGLTHWKQQSGYHRRSLAETAMYRFKQLLAGKISLRNY NGQVGEVMAYVSAINKLMEWSPLPKMASNVPKWRMKLPTD" misc_feature complement(1620455..1620985) /locus_tag="B565_1461" /note="Transposase DDE domain; Region: DDE_Tnp_1; pfam01609" /db_xref="CDD:144990" gene complement(1621430..1621892) /locus_tag="B565_p004" /note="UDP-N-acetylglucosamine 4,6-dehydratase" /pseudo /db_xref="GeneID:10487379" gene complement(1622142..1623332) /locus_tag="B565_1462" /db_xref="GeneID:10489949" CDS complement(1622142..1623332) /locus_tag="B565_1462" /codon_start=1 /transl_table=11 /product="FliU-like protein" /protein_id="YP_004392114.1" /db_xref="GI:330829162" /db_xref="GeneID:10489949" /translation="MIKSPPAHQFVPVFVKNFQCIGDKCEDTCCRGWNISIDKKTYRS YSSHPDLWLRTETMKHIQKVKKDDHNWGQIILNEEGYCPFLSDGWCQIHKEAGVDALS NTCRSYPRVETRFGDNLKLSLTLSCPEVCRQVLLNPDAMVMEAQPFKGFYKTQLISEQ VENNHLLSIEIILTQGISIEEKLWIIGLMLHRSEDSLSNQQFLAQINSLINNGELHNA FLQIPYLDKLQWWALHQLTQLQSLSSQRKNRRGRVIINYCLQKITELFSDDGDITPLA KIHDVWHQKVEPFLNAHPHIMQNYLVYYVYHHNFPFDPDITPQQCYQLLIADYFLLRS YLCLIAMANPLTLQDVTDLFYSYHCIRMHNKEFEKAIAIGLSQHGCNNDISLYALLNT SPPK" gene complement(1623454..1624257) /locus_tag="B565_1463" /db_xref="GeneID:10487380" CDS complement(1623454..1624257) /locus_tag="B565_1463" /codon_start=1 /transl_table=11 /product="periplasmic binding protein" /protein_id="YP_004392115.1" /db_xref="GI:330829163" /db_xref="GeneID:10487380" /translation="MAVWLPCVLVAWLPGVLQAATPTRVVSVVPHLTELLYEIGAGDK LVAIDDASDYPPEVKTKPKVANYRSINVEAVLAQKPDLILGWRSAQSRMLAPLAQIGI PVFYSEPTDFASLATEMRALGKLLGVEKSANEAADRYLARLHSLQQRYGQPTGVKVFY QLWYPPLTSVSGNAWPAQAIELCGGINIMANAKTPYPQVDMEQVIRANPSLILAGSQD PDALRHWLKWPNLDAVQHQRLDLINSDELHRFTSRTLNAVESMCRMIHY" misc_feature complement(1623460..1624236) /locus_tag="B565_1463" /note="vitamin B12-transporter protein BtuF; Provisional; Region: PRK03379" /db_xref="CDD:179575" misc_feature complement(1623469..1624188) /locus_tag="B565_1463" /note="Cobalamin binding protein BtuF. These proteins have been shown to function as initial receptors in ABC transport of vitamin B12 (cobalamin) in eubacterial and some archaeal species. They belong to the TroA superfamily of helical backbone metal...; Region: BtuF; cd01144" /db_xref="CDD:29747" misc_feature complement(order(1623670..1623672,1623754..1623756, 1623994..1623996,1624000..1624002,1624105..1624107, 1624165..1624170)) /locus_tag="B565_1463" /note="cobalamin binding residues [chemical binding]; other site" /db_xref="CDD:29747" misc_feature complement(order(1623652..1623654,1624039..1624041)) /locus_tag="B565_1463" /note="putative BtuC binding residues; other site" /db_xref="CDD:29747" misc_feature complement(order(1623895..1623900,1623907..1623909, 1623916..1623921,1623925..1623927,1623934..1623936, 1623946..1623948,1623964..1623966,1623973..1623975, 1623997..1623999)) /locus_tag="B565_1463" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29747" gene complement(1624268..1625230) /locus_tag="B565_1464" /db_xref="GeneID:10487381" CDS complement(1624268..1625230) /locus_tag="B565_1464" /codon_start=1 /transl_table=11 /product="Cobalamin biosynthesis protein CbiB" /protein_id="YP_004392116.1" /db_xref="GI:330829164" /db_xref="GeneID:10487381" /translation="MIENGSFDLMADALLSTTAAILVGAALLEAVIPWPSHLRLSAVT PLLTRLGHKVHRPDGSPGQQMQAGLLAMLVVWLPCAAGLWSLRNLALSEPIFDLLFLL LMLESRPLRELAHATRSLATQETLPLARLQSAPWLKRETGKLSAMGLAKAVTESCALR LVGQWAGPLLGFALAGVQGALLWRLVQLMNQSWSRKDPAFDHFGRAASALYQGLNASV ILLLGLPLLASRLKQAAQLLRSGALWPYPAMGMLLTLLVDKCRIRLGGPRYYQGALQR WPVIGTGAEPDSEIPRKVLNILQGCSWGWLILALLVTVAGLFHG" misc_feature complement(1624373..1625176) /locus_tag="B565_1464" /note="CobD/Cbib protein; Region: CobD_Cbib; cl00561" /db_xref="CDD:193870" gene complement(1625227..1625919) /locus_tag="B565_1465" /db_xref="GeneID:10487382" CDS complement(1625227..1625919) /locus_tag="B565_1465" /codon_start=1 /transl_table=11 /product="5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase" /protein_id="YP_004392117.1" /db_xref="GI:330829165" /db_xref="GeneID:10487382" /translation="MEVGIIGAMEQEVALLRSQMSNPTTLQLGGCEFYQGMLAGKEVI LTRSGIGKVAASVATSLLLEKFAPDCVINTGSAGGFAQDLHIGDVVIASEMRFHDVDV TAFGYEIGQMAQQPAAFPCDEKLIAVAQDCIAEQGKHQTKVGLICTGDQFMCKPDAIA KARADFPQMLAVEMEGAAIGQVCHMFKVPYLVVRAMSDIAGKEQVESFDAFIEVAGKH SAEVIIKMLGKL" misc_feature complement(1625230..1625919) /locus_tag="B565_1465" /note="Phosphorylase superfamily; Region: PNP_UDP_1; cl00303" /db_xref="CDD:193757" gene complement(1626088..1627020) /locus_tag="B565_1467" /db_xref="GeneID:10487383" CDS complement(1626088..1627020) /locus_tag="B565_1467" /codon_start=1 /transl_table=11 /product="putative divalent heavy-metal cations transporter" /protein_id="YP_004392118.1" /db_xref="GI:330829166" /db_xref="GeneID:10487383" /translation="MDHLSALPPLSWSQQLRSQIQSRPLTAIGLFIALAAVLLLLLQS LIMLATGEVTSGVHYGLIGGAAGFAATAIGALPALFLRSVPQKVEDTMLGFAAGMMLA ASAFSLLLPGLEAAKGITGNGFSAAAVVVVGMTLGVLLMLGLDQFTPHEHDKTGPCGP GHESCSRVWLFVFAIALHNLPEGMAIGVSFSQGDMSVGLPLTTAIALQDIPEGLAVAL AMCAAGFRPSVAVLVAIASGLLEPVGALLGVGLSSGLAIAYPIGLGLAAGAMLFVVSH EVIPETHRNGHQTYATLGLMAGFALMMTLDTALG" misc_feature complement(1626091..>1626588) /locus_tag="B565_1467" /note="Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]; Region: COG0428; cl00437" /db_xref="CDD:185996" gene 1626981..1627202 /locus_tag="B565_1466" /db_xref="GeneID:10487385" CDS 1626981..1627202 /locus_tag="B565_1466" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392119.1" /db_xref="GI:330829167" /db_xref="GeneID:10487385" /translation="MTRITGEELRDGPWHGLKVSKADNGITSTWPPLVHACKAIATIE KMASGEYEYFCDPARIVGFVKLLLIFKEK" gene 1627360..1628991 /locus_tag="B565_1468" /db_xref="GeneID:10487384" CDS 1627360..1628991 /locus_tag="B565_1468" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004392120.1" /db_xref="GI:330829168" /db_xref="GeneID:10487384" /translation="MFYKNLSIGKKIAVVFAVIAAVNVVFGVFLSSELRGVRDRVLNF TDSTLPSVLSVETLLYDVSYVRRAQFALLMVKDAADLQARRSRIQQNIQKVDNAFHAY EATVGADHERQVFNQAKQQWLSYQRAVNEFDQLLVQGQQEQAKAQLFASNAAFGSLER AVNALIDVNLGFVKENRSSLLGSVSMVTTFAMVSIGALLVFMVVMSWFLTRQICLPLQ AVVAQANAIAAGDLTHQLERQHIGRDELGMLAKASLKMQDNLRGLIEEVVAAVTQLGA AIDEVSAVSEQSAKGIQSQQQEISLVATAMTQMKATVADVAGNTEHTSESASAANTLA RKGNQDVQRSLVAITRVAEEIEQAGTLVAELERESAQINVVVDVIRSIADQTNLLALN AAIEAARAGEQGRGFAVVADEVRTLAGRTQASTGEIVAIIETLQSRANQAKEVTGLSC DMIRQCVTQSEQTGTGIQQIEEAVAQIADMAIQIASACGEQDAVSDELGRNVERINES ANEVALGADHTARACLELSQLAVGLKQTIGRFRLA" misc_feature <1627504..1627869 /locus_tag="B565_1468" /note="Four helix bundle sensory module for signal transduction; Region: 4HB_MCP_2; pfam12729" /db_xref="CDD:193205" misc_feature 1627936..1628142 /locus_tag="B565_1468" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 1628197..1628982 /locus_tag="B565_1468" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 1628404..1628985 /locus_tag="B565_1468" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1629408..1630211) /locus_tag="B565_1469" /db_xref="GeneID:10487386" CDS complement(1629408..1630211) /locus_tag="B565_1469" /codon_start=1 /transl_table=11 /product="fructose-1,6-bisphosphatase-like protein" /protein_id="YP_004392121.1" /db_xref="GI:330829169" /db_xref="GeneID:10487386" /translation="MHPMLNIAVRAARNAGQVVVKAFSQPENIEAIQKGSNDFVTNVD REAEAAIIHTIKKSYPEHSIVAEESGEIAGTNPDYQWIIDPLDGTTNLVKGIPHFAVS IALRVKGKTEQAVVYDPIRDELFTATRGSGAQLNGYRIRVGKAKELAGTVLATGFPYK QKHHIESYLKMFQSMFIECADIRRSGSAALDLAYVAAGRVDGFWEIGLKPWDTAAGEL LAKEAGAIVTDFVGGHNYENSGNIVVANPRVLKEMLGKIREELPESLAK" misc_feature complement(1629474..1630202) /locus_tag="B565_1469" /note="IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be...; Region: IMPase; cd01639" /db_xref="CDD:30137" misc_feature complement(order(1629576..1629581,1629945..1629962, 1630008..1630013,1630080..1630082,1630098..1630100, 1630113..1630115)) /locus_tag="B565_1469" /note="active site" /db_xref="CDD:30137" misc_feature complement(order(1629609..1629620,1629630..1629632, 1629654..1629674,1629684..1629686,1629693..1629698, 1629705..1629707,1629714..1629719,1629741..1629746, 1629750..1629752,1629756..1629764,1629918..1629935, 1629939..1629944,1630095..1630097,1630101..1630103)) /locus_tag="B565_1469" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:30137" gene 1630411..1630866 /locus_tag="B565_1470" /db_xref="GeneID:10487387" CDS 1630411..1630866 /locus_tag="B565_1470" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392122.1" /db_xref="GI:330829170" /db_xref="GeneID:10487387" /translation="MNLSLVSQNVSAASEGLLAILRSSPEYGDHFAHITVTPLAQWQP AKTEAAILLIDGDAPWQDAGFARGEDETIGLPVLPLLIRKGDKELTVCGPDVRDPRFY FVSNGIVLDESELAEPACSRVLLRKLESYFPLLSRLIMLRQRKPVAVIN" gene 1631035..1631697 /locus_tag="B565_1471" /db_xref="GeneID:10487388" CDS 1631035..1631697 /locus_tag="B565_1471" /codon_start=1 /transl_table=11 /product="glutathione S-transferase family protein" /protein_id="YP_004392123.1" /db_xref="GI:330829171" /db_xref="GeneID:10487388" /translation="MIDFYTAATPNGFKVAIALEELGLPYRVIPLDLSALDQKKPEFL AINPNGRIPAIVDLDNDDFAVFESGAILIYLAEKAGKLLPADPKRRSQAIQWLMFQMG GVGPMMGQANVFYRYFPEKIPAAIERYQKEGRRLFEVLDSHLAHHEYLADEYSIADIA TWPWVRIYDWSGISIEGLPHLQAWMVRMAEKPACQKGITIPPRKEQPDELIKQAQQMV TR" misc_feature 1631035..1631613 /locus_tag="B565_1471" /note="GSH-dependent disulfide bond oxidoreductase; Provisional; Region: PRK13972" /db_xref="CDD:172475" misc_feature 1631035..1631277 /locus_tag="B565_1471" /note="GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen...; Region: GST_N_Ure2p_like; cd03048" /db_xref="CDD:48597" misc_feature order(1631062..1631067,1631074..1631076,1631083..1631085, 1631092..1631097,1631251..1631253) /locus_tag="B565_1471" /note="C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48597" misc_feature order(1631065..1631067,1631185..1631193,1631233..1631238) /locus_tag="B565_1471" /note="GSH binding site (G-site) [chemical binding]; other site" /db_xref="CDD:48597" misc_feature order(1631176..1631181,1631185..1631187,1631224..1631226, 1631230..1631235,1631242..1631244) /locus_tag="B565_1471" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48597" misc_feature 1631299..1631628 /locus_tag="B565_1471" /note="GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen...; Region: GST_C_Ure2p_like; cd03178" /db_xref="CDD:48105" misc_feature order(1631305..1631310,1631317..1631322,1631326..1631331, 1631335..1631340,1631362..1631364,1631371..1631376, 1631386..1631388,1631398..1631400,1631404..1631406, 1631416..1631421,1631437..1631439,1631449..1631451) /locus_tag="B565_1471" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48105" misc_feature order(1631314..1631316,1631332..1631337,1631512..1631514, 1631521..1631526,1631605..1631607,1631611..1631613, 1631620..1631622) /locus_tag="B565_1471" /note="N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48105" misc_feature order(1631335..1631337,1631347..1631352,1631359..1631364, 1631368..1631370,1631524..1631526,1631533..1631535) /locus_tag="B565_1471" /note="putative substrate binding pocket (H-site) [chemical binding]; other site" /db_xref="CDD:48105" gene 1631960..1633156 /locus_tag="B565_1472" /db_xref="GeneID:10487389" CDS 1631960..1633156 /locus_tag="B565_1472" /codon_start=1 /transl_table=11 /product="multidrug resistance protein D" /protein_id="YP_004392124.1" /db_xref="GI:330829172" /db_xref="GeneID:10487389" /translation="MDRHSFYPLFLLTILMVAVGQMTQTLYVPSIPMMAGDFNVASGQ LQAVMACYLIPYGLSQFVYGPLSDRIGRRPVLIVGMMVFLVGTLIIQVIPHFAALLVG SFIQGLGTGAGGAMSRTVMRDRYNGAELNRANSLVSMGVIFSPLLAPVLGGWLTELFN WRAGYWFLFGFGALATLAIMAWFGETLPVAARQPLRVGAAYRHVLGNPKFQGNLLCLM ATFAGLAVFEAAAGVLLGDVLKLSARTVSVLFVLPLPGYLFGAWLSAKLSFRLTQGKL MRLGIAFLALGSLIILVPGLFGVVSAASLVGGAAVYFIGSGILYPTATSCAIEPFPGQ AGTAGAILGGMQNLGAGVVTLLAAGFPMTGQVTLGAIMTLMVLIVALSFVWLRHHGSP HEQMAI" misc_feature 1631960..1633150 /locus_tag="B565_1472" /note="multidrug resistance protein D; Provisional; Region: emrD; PRK11652" /db_xref="CDD:183259" misc_feature 1631987..1633117 /locus_tag="B565_1472" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature order(1632029..1632031,1632038..1632046,1632050..1632055, 1632104..1632106,1632113..1632118,1632125..1632127, 1632137..1632142,1632146..1632151,1632287..1632292, 1632299..1632304,1632311..1632316,1632323..1632325, 1632359..1632364,1632371..1632376,1632392..1632394, 1632620..1632622,1632629..1632634,1632641..1632646, 1632653..1632655,1632695..1632697,1632707..1632709, 1632719..1632721,1632728..1632730,1632740..1632742, 1632896..1632898,1632905..1632910,1632917..1632919, 1632929..1632934,1632941..1632943,1632971..1632976, 1632983..1632988,1632995..1633000,1633007..1633009) /locus_tag="B565_1472" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene complement(1633550..1633822) /locus_tag="B565_1473" /db_xref="GeneID:10487390" CDS complement(1633550..1633822) /locus_tag="B565_1473" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392125.1" /db_xref="GI:330829173" /db_xref="GeneID:10487390" /translation="MGQQDALRQAAEQLTDKLIDLRQRSKVSSNEQLAIMAALNFCHE LCLEKEKNHQYSETMDKRIKMLQRTIEAALIEHGQYGDSSEEGQQP" misc_feature complement(1633571..>1633816) /locus_tag="B565_1473" /note="Cell division protein ZapA; Region: ZapA; cl01146" /db_xref="CDD:194051" gene 1634056..1634625 /locus_tag="B565_1474" /db_xref="GeneID:10487391" CDS 1634056..1634625 /locus_tag="B565_1474" /codon_start=1 /transl_table=11 /product="YecA family protein" /protein_id="YP_004392126.1" /db_xref="GI:330829174" /db_xref="GeneID:10487391" /translation="MSKTNPLKYAAVADIMEQHELMASAVEAHGVMCGLVCGGVALDD KSWLPHFNDLVNDGFGLPAPVRQVMTDLYHNVVESLMAQKGVELLLPSDDAPLDERID SLVDWSQAFLAGFGVVQQELSRASEELQEMIQDIASITQVSAEFDQEDDKNEASFLVL YEHVKLGVMMAFEEFGKRPDTPSAPPTLH" misc_feature 1634056..1634622 /locus_tag="B565_1474" /note="Uncharacterised protein family (UPF0149); Region: UPF0149; cl01173" /db_xref="CDD:194060" gene 1634803..1636026 /locus_tag="B565_1475" /db_xref="GeneID:10487392" CDS 1634803..1636026 /locus_tag="B565_1475" /codon_start=1 /transl_table=11 /product="2-octaprenyl-6-methoxyphenol hydroxylase" /protein_id="YP_004392127.1" /db_xref="GI:330829175" /db_xref="GeneID:10487392" /translation="MSQSDVRQVDVTLVGGGMSGAVLALSLAALLRSDGSPLEILLLE ASVPEQHTHSGFDARAIALSAGTCDALLRRGLWPLFAPHCATITQIHVSDRGHFGQAR LSAAEYGLPALGQVIELAAAGYELQRAMAASPNIRVCCPARVSEIVPDEEKVTLTLES GEQIETRLLVAADGGNSFVRQHFKLPVTRHDFEQHAIIATVKTAQDPEGRAFERFTEG GPLALLPMQEGLSSLVWSVGQHEVDELMALDEAAFLARLQQAFGWRLGRFERCGVRHV YPLILTACDYPLAQRTVLVGNAAHALHPIAGQGFNLGMRDLDLLTGAVAKALAEGEDI GSFKVLSGYWQQRKRDQEQTVWLTSSLAQLFSNGHDPLVAGRNLALTLMGRFPCLKAP LASRTLGFVADVCGN" misc_feature 1634899..1635999 /locus_tag="B565_1475" /note="2-polyprenyl-6-methoxyphenol 4-hydroxylase; Region: UbiH; TIGR01984" /db_xref="CDD:162640" misc_feature 1634914..1636011 /locus_tag="B565_1475" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" gene 1636149..1637417 /locus_tag="B565_1476" /db_xref="GeneID:10487393" CDS 1636149..1637417 /locus_tag="B565_1476" /codon_start=1 /transl_table=11 /product="putative oxidoreductase with FAD/NAD(P)-binding domain" /protein_id="YP_004392128.1" /db_xref="GI:330829176" /db_xref="GeneID:10487393" /translation="MQMQNVDVVIVGGGMVGLGLAAALKHSALKVLVVEGQLPDPQLG EVADNRVSALSLASQQILRHVGAWDGIEARRLQAYEKMAVWEQDSFGHIDFDAASLRQ ANLGHIVENRVIQLALLEAIEGASNIQLLTPARAKSLQSGPAGALLLLEDGQAISAKL VVAADGAHSWVRRQADIPLTSWDYGHHALVATVRCAEPHEAVARQIFTPDGPLAFLPL WQENLCSIVWSLPAARAEALCTCDDEQFNRQLTAAFDARLGLCKVEGPRSAIPLTARY ARDFARERLVLVGDAAHTIHPLAGQGVNLGLLDAAALAEQILQNHAAGEDIGLLANLR SYERWRKSEAARMLAAMEGLKRLFSGANPLKKLVRGVGLRAANLLTPFKEGVIRAAMG LEGELPALARPDWAVAATKGSAMQAKGEKN" misc_feature 1636152..1637366 /locus_tag="B565_1476" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 1636227..1637324 /locus_tag="B565_1476" /note="Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; Region: Ubi-OHases; TIGR01988" /db_xref="CDD:162642" gene 1637834..1638931 /locus_tag="B565_1477" /db_xref="GeneID:10487394" CDS 1637834..1638931 /locus_tag="B565_1477" /codon_start=1 /transl_table=11 /product="glycine cleavage system aminomethyltransferase T" /protein_id="YP_004392129.1" /db_xref="GI:330829177" /db_xref="GeneID:10487394" /translation="MIQTTVLHPKHLEAGAKMVDFHGWEMPINYGSQLEEHHAVRSDA GMFDVSHMTIVDLTGERVKAFLQHLLANDVAKLTAPGKALYSGMLNPEGGVIDDLITY YLGDTFYRLVVNSATREKDLAWIRHHAIDFDITVTERPELAMIAVQGPNAKVKAAAVL SAAQRTAVVGMKPFFGVQAGDLFIATTGYTGEDGYEIVVPQEKACELWQALLDNGVAP CGLGARDTLRLEAGMNLYGQDMDESISPLAANMAWTIAWEPSDRNFIGRDVLEAQKAA GNQPKLVGLVMEEKGVLRAGMPVTFTAANGEKREGVITSGSFSPTLGYSIALARVPRD IGELAEVEIRKKLVTVKVTKPAFVRNGQKLV" misc_feature 1637834..1638922 /locus_tag="B565_1477" /note="glycine cleavage system aminomethyltransferase T; Reviewed; Region: gcvT; PRK00389" /db_xref="CDD:178995" misc_feature 1638617..1638898 /locus_tag="B565_1477" /note="Glycine cleavage T-protein C-terminal barrel domain; Region: GCV_T_C; pfam08669" /db_xref="CDD:192119" gene 1639016..1639405 /locus_tag="B565_1478" /db_xref="GeneID:10487395" CDS 1639016..1639405 /locus_tag="B565_1478" /codon_start=1 /transl_table=11 /product="glycine cleavage system H protein" /protein_id="YP_004392130.1" /db_xref="GI:330829178" /db_xref="GeneID:10487395" /translation="MSHIPSELKYATSHEWIRVEANGEAVVGITEHAQELLGDMVFVE LPEVGKQVSAGDDCAVAESVKAASDIYSPVSGEIIAVNEELEGSPELVNSDPYSAGWL FRIKLDDESELANLLDAEGYQNVVDEE" misc_feature 1639043..1639330 /locus_tag="B565_1478" /note="Glycine cleavage H-protein. Glycine cleavage H-proteins are part of the glycine cleavage system (GCS) found in bacteria, archea and the mitochondria of eukaryotes. GCS is a multienzyme complex consisting of 4 different components (P-, H-, T- and L-...; Region: GCS_H; cd06848" /db_xref="CDD:133457" misc_feature 1639208..1639210 /locus_tag="B565_1478" /note="lipoyl attachment site [posttranslational modification]; other site" /db_xref="CDD:133457" gene 1639705..1642581 /locus_tag="B565_1479" /db_xref="GeneID:10487396" CDS 1639705..1642581 /locus_tag="B565_1479" /codon_start=1 /transl_table=11 /product="glycine dehydrogenase" /protein_id="YP_004392131.1" /db_xref="GI:330829179" /db_xref="GeneID:10487396" /translation="MTQSLFELEQKHDFVRRHIGPGEEELRQLLATVGAESLDDLIAQ TVPAAIRLPGPLGIGAGMTEVEALAKLRGYAAQNKIAKSYIGMGYHDTHVPHVILRNV LENPGWYTAYTPYQPELAQGRLEALLNFQQLTLDLTGMDLASASLLDEATAAAEAMAL AKRMAKSKSNLFFVADDVHPQVIDVVKERAVHFGFDVAVGAASDAVSEEVFGALFQYP TTTGEVKDLRALIAAVQAQKGLACVSADLLSLLLLKSPGELGADVVLGSAQRFGVPMG YGGPHAAFFATRDAYKRSMPGRIIGVSKDARGKAALRMAMQTREQHIRREKANSNICT AQVLLANMASFYAVYHGPVGLKTIASRVHRLTTILALGLKAKGVALKHASWFDTLTVQ TADKAALIAKAEGLGINLRADLDGAVGVSLSETTTRADVAELFDLFLGQGHGLDIEAL DKAAQAHHAIPQDLLRTDAVLTHEVFNKYHSETEMLRYIHRLEAKDLALNYAMISLGS CTMKLNATAEMIPVTWPEFGKLHPFAPLAQAKGYQLLLADLENWLVKVTGYDAVCMQP NSGAQGEYAGLLAIKKYHESRGEGHRDICLIPASAHGTNPASAQMAGLKVIVTACDKS GNVDLDDLRAKAAEAGDQLSCLMVTYPSTHGVYEETIKEVCDIVHQHGGQVYLDGANM NAQVGLTAPGFIGADVSHLNLHKTFAIPHGGGGPGMGPIGVKKHLAPFVAGHAVVKTD KESRDNGAVSAAPFGSASILPISWMYIAMLGDEGLKRSTQVAILNANYLAKKLGDSFP VLYSGRNGRVAHECILDIRPLKEASGISEMDVAKRLMDYGFHAPTMSFPVAGTLMVEP TESESKRELDRFVEAMTSIRAEIAKVQEGQWSLADNPLVHAPHTQDDVMDAEWSRGYS RAEAVFPSDAVRAAKLWPSVNRIDDVYGDRNLFCSCIPTEDYAK" misc_feature 1639723..1642575 /locus_tag="B565_1479" /note="glycine dehydrogenase; Provisional; Region: PRK05367" /db_xref="CDD:180041" misc_feature 1639894..1641018 /locus_tag="B565_1479" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl00321" /db_xref="CDD:193768" misc_feature order(1640158..1640163,1640170..1640172,1640350..1640352, 1640434..1640436,1640443..1640445,1640503..1640505, 1640512..1640514) /locus_tag="B565_1479" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99742" misc_feature 1640512..1640514 /locus_tag="B565_1479" /note="catalytic residue [active]" /db_xref="CDD:99742" misc_feature 1641148..1642320 /locus_tag="B565_1479" /note="Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2...; Region: GDC-P; cd00613" /db_xref="CDD:99737" misc_feature order(1641148..1641153,1641163..1641171,1641178..1641192, 1641229..1641231,1641235..1641237,1641241..1641255, 1641262..1641264,1641271..1641273,1641289..1641297, 1641301..1641309,1641313..1641315,1641322..1641330, 1641334..1641336,1641412..1641417,1641445..1641447, 1641505..1641516,1641523..1641528,1641532..1641537, 1641556..1641558,1641673..1641675,1641814..1641816, 1641832..1641852,1641970..1641978,1641994..1641996, 1642006..1642011,1642033..1642035,1642042..1642044, 1642057..1642059,1642063..1642065,1642087..1642089, 1642123..1642125,1642198..1642200,1642276..1642281, 1642288..1642293) /locus_tag="B565_1479" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:99737" misc_feature order(1641226..1641228,1641409..1641414,1641421..1641423, 1641508..1641510,1641514..1641516,1641736..1641738, 1641808..1641810,1641814..1641819) /locus_tag="B565_1479" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99737" misc_feature 1641817..1641819 /locus_tag="B565_1479" /note="catalytic residue [active]" /db_xref="CDD:99737" gene complement(1642673..1644226) /locus_tag="B565_1480" /db_xref="GeneID:10487397" CDS complement(1642673..1644226) /locus_tag="B565_1480" /codon_start=1 /transl_table=11 /product="putative aerotaxis sensor receptor (Aer-like) protein" /protein_id="YP_004392132.1" /db_xref="GI:330829180" /db_xref="GeneID:10487397" /translation="MVTSSLHTTDTEVEFADDIQLVSTTDLKGDITYANPAFCQVAGY RLEEMLGQHHNLVRHPDMPKAAFADLWAHLQAGKPWRGMVKNRCKDGRYYWVDAYVTP IYEDGKMVGYQSVRCRPAAEHKARASKMYKTLKARETGSAIHMGLRQLTPAMMTIPLL LVSVISALWLLSPLQALWVIIPLLAAIWFNRHPLFLTPRFLQQLEQDYDSISRLIFSG DAPHSIADFHIKLGQAKIRTVLGRVDDTTASLNAMANDLRGSASLASQDISSQDTQIQ QIATAVTQMASAAEEINRNIQDSNSQIEEARSHCITTSTQLSEAGEEMSALATQAEQA FQSAVELASESERIGTIMSEIRGIADQTNLLALNASIEAARAGDQGRGFAVVADEVRS LSTRTHKATEQIQNSIGHIQQTLGGWKEMMHLNVTRTNACLATTRASTGNLNQVVIEI DKVSDFSNQITAAATEQQAVIEEISRNINQISSLSHDNSLKIDQVSETSANLQSKASQ LKDLSRTFG" misc_feature complement(1643897..1644163) /locus_tag="B565_1480" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(1643879..1644136) /locus_tag="B565_1480" /note="PAS fold; Region: PAS_3; pfam08447" /db_xref="CDD:117024" misc_feature complement(order(1643954..1643956,1643969..1643971, 1644047..1644058,1644095..1644097,1644113..1644115, 1644125..1644127)) /locus_tag="B565_1480" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(1643927..1643929,1643933..1643935, 1644017..1644022,1644029..1644031,1644053..1644055, 1644065..1644067)) /locus_tag="B565_1480" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(1642679..1643275) /locus_tag="B565_1480" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1644552..1645622) /locus_tag="B565_1481" /db_xref="GeneID:10487398" CDS complement(1644552..1645622) /locus_tag="B565_1481" /codon_start=1 /transl_table=11 /product="putative membrane transport protein" /protein_id="YP_004392133.1" /db_xref="GI:330829181" /db_xref="GeneID:10487398" /translation="MNEWLTMLTDAAQMFLFLAVELSVLFLVISAGVSLIRQKIPDEK IQRMLGARHGKGYLLSALLGAVTPFCSCSTIPMLRGLLSAKAGFGPTLTFLFISPLLN PIIVGLMWATFGWKVTLLYAVIAASVSVMASMLLDRLGFERHVIDPKEATPSCGSNCG PATRATTQTNCSDNQRSAIRAIKPLNGAACCPAPQPEMAEQATLPCCGYGTAALTRAP QLPTAWVKARIDAWQQFKAVLPFLLLGVLIGSFIYGFIPAEWIAAHAGADNPLAIPFS AIVGIPLYIRAEAVIPLASVLLGKGMGMGAVMALIIGSAGASLTEVILLKSMFRTPMI AAFLTVILGMAILMGYLTQLLF" misc_feature complement(<1645260..1645607) /locus_tag="B565_1481" /note="Predicted permease; Region: DUF318; cl00487" /db_xref="CDD:119868" misc_feature complement(1644555..>1645010) /locus_tag="B565_1481" /note="Predicted permease; Region: DUF318; cl00487" /db_xref="CDD:119868" gene 1645729..1646055 /locus_tag="B565_1482" /db_xref="GeneID:10487399" CDS 1645729..1646055 /locus_tag="B565_1482" /codon_start=1 /transl_table=11 /product="putative ArsR family transcriptional regulator" /protein_id="YP_004392134.1" /db_xref="GI:330829182" /db_xref="GeneID:10487399" /translation="MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLAI PASTLSHHIAALVSVGLVKQNRESRTLLCVSQYAVLEEIIAFFRDECCVNSPEHRQDQ RQELPS" misc_feature 1645756..>1645938 /locus_tag="B565_1482" /note="Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to...; Region: HTH_ARSR; cd00090" /db_xref="CDD:28974" misc_feature order(1645756..1645761,1645765..1645767,1645774..1645776, 1645783..1645788,1645795..1645800,1645816..1645818, 1645906..1645908) /locus_tag="B565_1482" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:28974" misc_feature order(1645759..1645764,1645774..1645782,1645828..1645836, 1645861..1645872,1645876..1645881,1645888..1645893, 1645897..1645902,1645918..1645926) /locus_tag="B565_1482" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28974" misc_feature order(1645828..1645830,1645837..1645839) /locus_tag="B565_1482" /note="putative Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28974" gene complement(1646144..1647526) /locus_tag="B565_1483" /db_xref="GeneID:10487400" CDS complement(1646144..1647526) /locus_tag="B565_1483" /codon_start=1 /transl_table=11 /product="gamma-aminobutyrate permease-like protein" /protein_id="YP_004392135.1" /db_xref="GI:330829183" /db_xref="GeneID:10487400" /translation="MDLKQDGEELKRGLKNRHIQLIALGGAIGTGLFLGIAQTIKMAG PSVLLGYAIGGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGEFAGFASGWNYWVLY VLVSMAELTAVGIYVQYWWPEIPTWMSAAFFFVLINAINLSNVKAFGEMEFWFAIIKV VAIIGMIGFGGYLLISGTGGPEASVTNLWAQGGFFPNGISGLVMAMAVIMFSFGGLEL VGITAAEADNPEKSIPKATNQVIYRILIFYIGALAILMSLYPWGKVVEGGSPFVMIFH ALDSNLVATVLNIVVLTAALSVYNSCVYCNSRMLFGLAKQGNGPKALLKTNKSGVPLV ALSVSAIATLLCVLLNYLMPGKAFGLLMALVVSALVINWAMISLAHLKFRKAMVAEGV QPKFKAFWYPFGNYLCLAFMAGILVIMYMTPDFRISVELIPAWLVVLGIGFVIKRKGQ AQSKVAANLG" misc_feature complement(1646165..1647526) /locus_tag="B565_1483" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene 1647938..1648210 /locus_tag="B565_1484" /db_xref="GeneID:10487401" CDS 1647938..1648210 /locus_tag="B565_1484" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392136.1" /db_xref="GI:330829184" /db_xref="GeneID:10487401" /translation="MLQQGVARGLLVALWLAIAASPQLLLVVATMLLGWLLLGDQGLL HYWQPLLLVGGVTGAVAGGWLAERVRLRHGLLAFYARLMNNPELNR" gene complement(1648439..1649251) /locus_tag="B565_1485" /db_xref="GeneID:10487402" CDS complement(1648439..1649251) /locus_tag="B565_1485" /codon_start=1 /transl_table=11 /product="phosphotransferase" /protein_id="YP_004392137.1" /db_xref="GI:330829185" /db_xref="GeneID:10487402" /translation="MHTVFYISDGTAITAEVFGHAVLSQFPLAFEQITIPFVETLEKA RQVRMRIDEQFRQTGVRPILFHTIVDPLVREEVLKSEACGHDFLNTFVSPLEQELGVK AEPRLHRTHGMENRKLYDDRIEAVNFALANDDGITTKEYDEADIILIGVSRCGKTPTS LYLALQFGIRAANYPFIEQDMGMLELPAPLKANRHKLFGLTIAPQRLHEIRNQRRANS RYSSIEQCEQELACVERLFRQEAIRFLDTSSHSVEEISAKVLEATGLRRQLC" misc_feature complement(1648451..1649251) /locus_tag="B565_1485" /note="Domain of unknown function (DUF299); Region: DUF299; cl00780" /db_xref="CDD:186186" gene 1649599..1651971 /locus_tag="B565_1486" /db_xref="GeneID:10487403" CDS 1649599..1651971 /locus_tag="B565_1486" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate synthase" /protein_id="YP_004392138.1" /db_xref="GI:330829186" /db_xref="GeneID:10487403" /translation="MQQYVLWYEQLGMQDVERVGGKNASLGEMISNLSGAGVSVPGGF ATTAFAFNEFLESSGLNGKIHHLLDNLDVDDIAALNRAGQQIRDWVIEAPFQPELEQA IRVAYEKLSAGVEASFAVRSSATAEDMPDASFAGQQETFLNVRGIDAVMTAVKHVFAS LFNDRAISYRVHQGYDHKGVALSAGVQRMVRSDLAASGVMFTLDTESGFNDVVFITGA HGLGEMVVQGAVNPDEFYVHKPTLRGGRPAVVRKTLGSKLIKMTYSDDAGHGRQVKIV DTDEAERSRFCITDEEVMALAKQALIIEQHYGRPMDIEWAKDGQDGQLYIVQARPETV RSRQEANTLERFALKQAGKVLIEGRAIGHKIGAGPARVISSISQMDEVQPGDVLVTDM TDPDWEPIMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATDHIQPGQRITVSC AEGDTGFIYDGELDFDVAVTEVGNMPRLPIKIMMNVGNPDRAFDFAQLPNAGVGLARL EFIINRMIGVHPKALLEFDQQTPELQATIGKMIAGYDSPREYYVAKLTEGIATLGAAF WPERVIVRMSDFKSNEYANLVGGRGYEPHEENPMIGFRGASRYIADSFRPCFALECEA IKRVRDVMGLTNVEVMIPFVRTVGEAEQVIDILAENGLRRGERGLKVIMMCEIPSNAL LADKFLEHVDGFSIGSNDMTQLTLGLDRDSGLIAHLFDERNEAVKTLLAMAIQAARKA GKYVGICGQGPSDHPDFAAWLVEQGIDSVSLNPDTVVDTWLYLAEQHKAR" misc_feature 1649599..1651962 /locus_tag="B565_1486" /note="phosphoenolpyruvate synthase; Validated; Region: PRK06464" /db_xref="CDD:180577" misc_feature 1649641..1650630 /locus_tag="B565_1486" /note="Pyruvate phosphate dikinase, PEP/pyruvate binding domain; Region: PPDK_N; pfam01326" /db_xref="CDD:189943" misc_feature 1650745..1650942 /locus_tag="B565_1486" /note="PEP-utilising enzyme, mobile domain; Region: PEP-utilizers; cl01586" /db_xref="CDD:194171" misc_feature 1651036..1651926 /locus_tag="B565_1486" /note="Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors. Like other allosteric enzymes, PK has a high substrate affinity R state and a low...; Region: Pyruvate_Kinase; cl09155" /db_xref="CDD:195807" gene 1652256..1653233 /locus_tag="B565_1487" /db_xref="GeneID:10487404" CDS 1652256..1653233 /locus_tag="B565_1487" /codon_start=1 /transl_table=11 /product="AraC family transcriptional regulator" /protein_id="YP_004392139.1" /db_xref="GI:330829187" /db_xref="GeneID:10487404" /translation="MLGACQQQGGDPDAILMAGGLTPFDIEREQGRIPAHSHYRMLQL MQPYLAGFHETILSYDIGQLYQHYPPLISLCLNQPSPRAALEVLLAYRPIIGSCDELR VRRGAQVSQYQYVNQGPASLGASQAIPNFIILYRILRVYLADAQVSVGFTGRPPLRHQ LLDHFFATRCRWEQGENTLIISNAQLDRPSHCYNEPLGRLQLAQLAQICADITERAPF AYLVGERIRHKIREGALESDESLLKEVCAAMNVSRWTLNRRLQGEGSSFSSILREVRV SEACRLLEEGAQPLQNISDRVGFSSQSAFNRFFKANTRMTPLAYRNARQ" misc_feature 1652280..1652822 /locus_tag="B565_1487" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:193103" misc_feature 1652979..1653218 /locus_tag="B565_1487" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:128636" misc_feature <1653120..1653221 /locus_tag="B565_1487" /note="Bacterial regulatory helix-turn-helix proteins, AraC family; Region: HTH_AraC; pfam00165" /db_xref="CDD:143933" gene complement(1653320..1655701) /locus_tag="B565_1488" /db_xref="GeneID:10487405" CDS complement(1653320..1655701) /locus_tag="B565_1488" /codon_start=1 /transl_table=11 /product="beta-glucosidase" /protein_id="YP_004392140.1" /db_xref="GI:330829188" /db_xref="GeneID:10487405" /translation="MPITTKLKAVSLGVSLALAGLLAGCNQNDSAPQVKDDAYYRGQA EAMVAKLTLSEKLDLLSGPGYGSANGAINLKQDVPGVAGYINGVMRTSDGIDIPALKL ADGPAGLRIDANRDGDSTSYHATAWPIGSLLASSWDVKLVKAIGEAMGDEVRQYGIDI LLAPGMNIQRNPLNGRNFEYYSEDPLLTGKIGAAMVNGVESNEVGTTIKHYFGNNSET NRNQINDIGEPRTFREIYLRGFQIAVDEAQPWAVMTSYNKFNGTYVNERRDAVTDLLR GEWKFDGLVMSDWFAGDVENSAFKQVLAGQDLIEPGNVKEQLQQSIEQGDLDEAKVNE AAVHILTQVMKSPSYNRLAVSNSPDLAAHAKLARQAGAESMVLLRNEATALPLATNST LASFGINQINTYKGGTGSGDVNAASTTTIAQGLAARFPVNEALQSYYRDFYENNKVYH EGQFGAKGYYTCAEAPVSGDLAALIANAATTQEAAVISIGRQAGEGADRSSGKGDYLL GDDERALIEAVSSAFHAKGKKVVVVLNVNGVIDTAQWSDKVDAILLAYMAGQETGHAV ADVLSGAVNPSGKLAQSFPQSYASVPSAGTFPGVDTNGDGEPDDLYYNEGIYVGYRYY STFEQAVSYPFGFGLSYTSFGYTSPAIANNTLADGAAGSLVLTATITNTGTVAGKEAA QVYVTAPEVKLKKPLIELKAFAKTAQLAPGASEQLSFTIPASILASFDEASNQWIVEP GSYRAYISPSSDVSSSTPVSFTVSKEIVVSNTTPGALALPEGIDPATVTTVTR" misc_feature complement(1654769..1655419) /locus_tag="B565_1488" /note="Glycosyl hydrolase family 3 N terminal domain; Region: Glyco_hydro_3; cl07971" /db_xref="CDD:186723" misc_feature complement(1653839..1654579) /locus_tag="B565_1488" /note="Glycosyl hydrolase family 3 C terminal domain; Region: Glyco_hydro_3_C; pfam01915" /db_xref="CDD:190157" gene complement(1656116..1656574) /locus_tag="B565_1489" /db_xref="GeneID:10487406" CDS complement(1656116..1656574) /locus_tag="B565_1489" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392141.1" /db_xref="GI:330829189" /db_xref="GeneID:10487406" /translation="MNKPVTLLLATLLAPLSGQLCAEESVTMDGKQYSTIEVNGQTYL IPDNGSKKRVARSLDSKVPQQTLRRGDVLMQGAASPELTVSGTLLVEADDASAKALAT RHGLNFKQSSGGIALLEAKPGTDLNAIATKLKSEGVNVQIELAGALKQPK" gene complement(1656593..1658467) /locus_tag="B565_1490" /db_xref="GeneID:10487407" CDS complement(1656593..1658467) /locus_tag="B565_1490" /codon_start=1 /transl_table=11 /product="serine protease Ahe2" /protein_id="YP_004392142.1" /db_xref="GI:330829190" /db_xref="GeneID:10487407" /translation="MKQTSLALAITALLSTLPSALVQANEGCAPLTGKESGMDIGRSS TERCLPGTNPLQDQQWYLLNSGQDGFSARSGIAGNDLNLWWAHRTGVLGQGVNVAVVD DGLAIAHPDLADNVRPGSKNVVTGSDDPTPTDPDTAHGTSVSGIIAAVDNAIGTKGIA PRAQLQGFNLLDDNSQQLQKDWLYALGDSDASRDNRVFNQSYGMSVVDPRSANSLDQS QLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSN FWNLVVSALNADGVRASYSSVGSNIFLSATGGEYGTDSPAMVTTDLPGCDMGYNRTDD PSTNRLHGNPQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARS ATRVDATQKPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFNPTYGFGLIDVNKALELA ANHQPLPPLVQLPWQKINVSGSAAAIPDVGNSPTSSTTRIATPLTIEAVQVMVSLDHQ RLPDLLIELVSPAGTRSILLSPFNSLVGQSLDQQQLGFVRTKGLRDMRMLSNKFYGES AQGTWRLEVTDVANGTRQVSLLNRETRERTTLTERNNRQPGKLISWSLRVLGHDANRS " misc_feature complement(1657286..1658317) /locus_tag="B565_1490" /note="Peptidase S8 family domain in Protein convertases; Region: Peptidases_S8_Protein_convertases_Kexins_Furin-lik; cd04059" /db_xref="CDD:173789" misc_feature complement(order(1658012..1658014,1658135..1658137, 1658309..1658311)) /locus_tag="B565_1490" /note="calcium binding site 1 [ion binding]; other site" /db_xref="CDD:173789" misc_feature complement(order(1657388..1657390,1657655..1657657, 1657742..1657744,1657844..1657846,1657862..1657864, 1657922..1657924,1658051..1658053,1658057..1658059, 1658159..1658164)) /locus_tag="B565_1490" /note="active site" /db_xref="CDD:173789" misc_feature complement(order(1657388..1657390,1658051..1658053, 1658162..1658164)) /locus_tag="B565_1490" /note="catalytic triad [active]" /db_xref="CDD:173789" misc_feature complement(order(1657580..1657582,1657670..1657672)) /locus_tag="B565_1490" /note="calcium binding site 2 [ion binding]; other site" /db_xref="CDD:173789" misc_feature complement(order(1657625..1657627,1657631..1657633, 1657640..1657642,1657646..1657648)) /locus_tag="B565_1490" /note="calcium binding site 3 [ion binding]; other site" /db_xref="CDD:173789" misc_feature complement(1656620..1656982) /locus_tag="B565_1490" /note="Proprotein convertase P-domain; Region: P_proprotein; pfam01483" /db_xref="CDD:190003" gene 1658990..1659856 /locus_tag="B565_1491" /db_xref="GeneID:10487408" CDS 1658990..1659856 /locus_tag="B565_1491" /codon_start=1 /transl_table=11 /product="D-methionine ABC transporter periplasmic D-methionine-binding protein" /protein_id="YP_004392143.1" /db_xref="GI:330829191" /db_xref="GeneID:10487408" /translation="MPFRSFLSSPLTASLRATAGASTFIAAIAVGSLSFSAVAADASL PTKQEIVIGTTVGDFADMVTDSIKPQLEAKGYKVKLVEFTDYVTPNIALADGSLDVNC FQHKPYLESFAKDRGLSLAPITQVPTGPMGLYSGKLAALDKMKEGSTVAIPNDPTNQA RALLMLQDLGWLTLKEGINPLKASEFDVVNNPHNLKLVLLEAAQLPRSREDVDFSVIN GNYAASSGIPFSEGLFLERSYDFINWVVVKSADAEQPFAKDVAAAYNSAAFKAYAAKR FVGYKYPQGWGG" misc_feature 1659062..1659769 /locus_tag="B565_1491" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(1659942..1661792) /locus_tag="B565_1492" /db_xref="GeneID:10487409" CDS complement(1659942..1661792) /locus_tag="B565_1492" /codon_start=1 /transl_table=11 /product="putative hydrolase, alkaline phosphatase superfamily" /protein_id="YP_004392144.1" /db_xref="GI:330829192" /db_xref="GeneID:10487409" /translation="MVETGNPYRDNVSRLITWGHWFSFFNIILAMLIATRYLGAISWP STTLGVIYLVVSWIGHFSFLSFVTYLLTIFPLSFVLPKEKSLRFISAIIATLALVLLL IDTQVFRLFKFHLNSQVWQLLLDQAQTEEGSIWSIIFVAVPTIFLLQLLLSAYVWRKI NKRKRRQYGNQVGLALLICFILTHVVNSWADATLYQPITMQRANFPLSYPMTARSFLA KHGWLDLDQYEKQAASQGDNSDSRMHYPLRPLNVNAPLTHNNLLIVVVDSLRFDMLNN INMPNLQRYADQHLTFRNHLSGGNDDLMGMFSLFYGLPGHYYKDISSDKRPPVLFDEM LRQDYQFGLFGAMEDAQKYRKSILAGLRKQVFVSEQSDDGKLLTDWQQWLEKRSPERP WFSLVYLSSPGDYQLPATMKGPFQPELANFNPATAYRAENLQKLENRYKNSVFYTDQL LEQMLTKLQSQGMDSNTIVVITSNHGQEFNDTRSNSWGAGSNYSPYQVQVPLVLAWPG RGSDVREQPSSHFDLAPTLMQGMLGVRNPARDYSVGRSLFDTSPRNWLLAGDQNDFAI YEGDTITHFNKQGDFELLERNSYRPIKHGTPDMGAMIQVMNELNRFYRNQ" misc_feature complement(1659948..1661792) /locus_tag="B565_1492" /note="Predicted hydrolase of alkaline phosphatase superfamily [General function prediction only]; Region: COG3083" /db_xref="CDD:32897" misc_feature complement(1661034..1661792) /locus_tag="B565_1492" /note="Domain of unknown function (DUF3413); Region: DUF3413; pfam11893" /db_xref="CDD:152329" misc_feature complement(1660206..1661015) /locus_tag="B565_1492" /note="Sulfatase; Region: Sulfatase; cl10460" /db_xref="CDD:195965" gene complement(1661840..1662067) /locus_tag="B565_1493" /db_xref="GeneID:10487410" CDS complement(1661840..1662067) /locus_tag="B565_1493" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392145.1" /db_xref="GI:330829193" /db_xref="GeneID:10487410" /translation="MPIVSKYNNEQFDALMNDLITALEKHKAPVDLSLMVLGNLTTNI INGMAPAQRQAITEKFVQALTASVDNRHDAH" misc_feature complement(1661858..1662067) /locus_tag="B565_1493" /note="Protein of unknown function (DUF1414); Region: DUF1414; cl01175" /db_xref="CDD:194062" gene 1662141..1663190 /locus_tag="B565_1494" /db_xref="GeneID:10487411" CDS 1662141..1663190 /locus_tag="B565_1494" /codon_start=1 /transl_table=11 /product="nucleoid-associated protein NdpA" /protein_id="YP_004392146.1" /db_xref="GI:330829194" /db_xref="GeneID:10487411" /translation="MSLDIDKIILHSLRQGGDGQPHADTRSQTLPPDEAVQGLMAELH RIYNGKGGKGFGFFADPEAAVAELADGEEAPKQPSPAFRIALEQLLDEQTEFVPFSVT VTQMLVKQLVEHALDEQGVLLFAKYNYVGVDYLLIALLEGKESVTVSEALELRHIQYL DIGKLNLVARIDLTEWKTQPDSRRYITFSKGRIGRKLGDFFMDLLGAREGMDAKVQNK GLLQAVEDYCDSRQLEPTERNDYKKQVFKYCTEQASAGEEIEIKELSAELPGDGDLDF YSFIGQEYELEERFPADRSTLRGLTKFVGSGGGLTLSFEQKLLNSRIFYDPQTDTLTI KGVPPNLKDQLLRQS" misc_feature 1662141..1663184 /locus_tag="B565_1494" /note="Nucleoid-associated protein [General function prediction only]; Region: COG3081" /db_xref="CDD:32895" misc_feature 1662141..1663184 /locus_tag="B565_1494" /note="nucleoid-associated protein NdpA; Validated; Region: PRK00378" /db_xref="CDD:178993" gene 1663599..1664780 /locus_tag="B565_1495" /db_xref="GeneID:10487412" CDS 1663599..1664780 /locus_tag="B565_1495" /codon_start=1 /transl_table=11 /product="maltose ABC transporter periplasmic binding protein" /protein_id="YP_004392147.1" /db_xref="GI:330829195" /db_xref="GeneID:10487412" /translation="MKKKLLSSLIGLATLGVACSATAAIDEGQLTIWINGDKGYNGLA EVGKKFEAETGIKVTVAHPDQVEVKFQQAAATGNGPDIFFWAHDRYGEWVKAGLLVPV TPNAATKGKFEQLAWDAMTVDGKTYGYPVAMEAVSLIYNKDLLPEPPKTFEEIAKIDE TLKKNGKRAIMWAYDTPYFSYPLVAANGGYAFKKTATGYDVKDTGVNNAGAKMGVGYI SEMIKSGHLEKGIDYGVMDAKFNKGEVAMMINGPWAWSNLDKSGIKYGVAPLPTLNGK PAKAFVGVLGATINAASPNKDLAIEFLENYLLTDAGLAPVNADKPLGAVALKSFQKTL ESDPHIKATMLNAQAGEPMPSVPEMSRFWSSFETALKNVTSGRQGVDEALDTAAKRIV Q" misc_feature 1663599..1664771 /locus_tag="B565_1495" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature 1663614..1664771 /locus_tag="B565_1495" /note="Maltose-binding periplasmic proteins/domains [Carbohydrate transport and metabolism]; Region: MalE; COG2182" /db_xref="CDD:32365" gene 1664856..1666508 /locus_tag="B565_1496" /db_xref="GeneID:10487413" CDS 1664856..1666508 /locus_tag="B565_1496" /codon_start=1 /transl_table=11 /product="maltose transport system permease MalF" /protein_id="YP_004392148.1" /db_xref="GI:330829196" /db_xref="GeneID:10487413" /translation="MEVVPSVESYAGPKDKHTWLKWTIAALVAILNGYAAVMMYASGE WVFALLDLVVVSVGLYVFMNKKTYAHRYIFPGVAGMVVFIIFPLAYTIGIAFTNYSGS NLLSVEQARDYHLKKTYKVAGGEFDFTLLGGDNGQFQLLLTQDDQSFISQPVSLMTNK ARELASREGRVQNTQQVVELQPFTGEAASKAAPIRAIVEHRTHLSDLDLVLPDGGTHL TLSSLRKFAAQKQHYTRLMDGAVLKSGVVIKDSNLLRDTQNGELMLPNGETGFYQYID EQGQFVGKGIAPGFVVSVGWKNFARIVTDPGIQSPFLQIFIWTVIFSTCSVAFTLAIG MVLACLVQWEELKGRGFYRVMLILPYAIPAFISILVFKGLFNQNFGEINMFLEAAFGI KPDWYTNPFLAKVMILIVNTWLGYPYMMILCMGLLKAIPEDLYEASAMDGAGPVQNFF KITVPLLMKPLTPLLIASFAFNFNNFVLIQLLTNGAPDIIGASTPAGTTDLLVSYTYR IAFQGSGGQDYGLASAIATAIFLIVGALALLNLKLSKADKQL" misc_feature 1665801..1666454 /locus_tag="B565_1496" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(1665849..1665854,1665861..1665866,1665879..1665881, 1665909..1665920,1665924..1665953,1665960..1665965, 1665969..1665971,1666089..1666094,1666098..1666100, 1666107..1666109,1666116..1666121,1666125..1666127, 1666137..1666142,1666149..1666151,1666200..1666202, 1666242..1666247,1666254..1666256,1666275..1666286, 1666293..1666298,1666371..1666376,1666407..1666412, 1666419..1666424,1666428..1666433,1666440..1666445, 1666452..1666454) /locus_tag="B565_1496" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(1665927..1665971,1666275..1666292) /locus_tag="B565_1496" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(1665969..1665971,1666074..1666076,1666293..1666295, 1666365..1666367,1666374..1666376,1666407..1666409) /locus_tag="B565_1496" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(1666152..1666190,1666206..1666211,1666221..1666223) /locus_tag="B565_1496" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 1666521..1667411 /locus_tag="B565_1497" /db_xref="GeneID:10487414" CDS 1666521..1667411 /locus_tag="B565_1497" /codon_start=1 /transl_table=11 /product="maltose transport system permease MalG" /protein_id="YP_004392149.1" /db_xref="GI:330829197" /db_xref="GeneID:10487414" /translation="MAIVQPKSVKYRVWATHLVMWGFLALIIFPLIMVIAISFRNGNF AVGEIIPSNPTLDHWKLALGMSITNADGSITPPPFPVLTWLWNSIKIAGITALMIVTL STTCAYAFARLRFRGKSTILQGMLIFQMFPAVLALVAIYALFNKIGDYIPWLGLNTHG GLILAYMGGIALHVWTIKGYFETIDSSLEEAAAIDGATPWQAFRLILLPLSVPILAVV FILAFIGSITEVPMASILLQDVNNLTLAVGAQQYLYPQNYLWGDFAAAAVLSGFPITV VFLLAQRWLVGGLTAGGVKG" misc_feature 1666542..1667405 /locus_tag="B565_1497" /note="ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpE; COG0395" /db_xref="CDD:30744" misc_feature 1666773..1667342 /locus_tag="B565_1497" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(1666821..1666826,1666833..1666838,1666851..1666853, 1666881..1666892,1666896..1666925,1666932..1666937, 1666941..1666943,1667019..1667024,1667028..1667030, 1667034..1667036,1667043..1667048,1667052..1667054, 1667064..1667069,1667076..1667078,1667127..1667129, 1667169..1667174,1667181..1667183,1667202..1667213, 1667220..1667225,1667262..1667267,1667295..1667300, 1667307..1667312,1667316..1667321,1667328..1667333, 1667340..1667342) /locus_tag="B565_1497" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(1666899..1666943,1667202..1667219) /locus_tag="B565_1497" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(1666941..1666943,1667004..1667006,1667220..1667222, 1667256..1667258,1667265..1667267,1667295..1667297) /locus_tag="B565_1497" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(1667079..1667117,1667133..1667138,1667148..1667150) /locus_tag="B565_1497" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 1667480..1668616 /locus_tag="B565_1498" /db_xref="GeneID:10487415" CDS 1667480..1668616 /locus_tag="B565_1498" /codon_start=1 /transl_table=11 /product="maltose ABC transporter ATP-binding protein" /protein_id="YP_004392150.1" /db_xref="GI:330829198" /db_xref="GeneID:10487415" /translation="MAEVVLNNVRKNYDPAVHKDTLRNINLSIKEGEFIVFVGPSGCG KSTLLRMIAGLEDITSGELTIGGRYMNDVPPVERNVGMVFQSYALYPHMNIYENMAFG LKLKKMDKENIHKRVMRAAEILGLEPLLDRKPKALSGGQRQRVAIGRSIVQQPQVFLF DEPLSNLDAALRVKMRIEIAKLHKELNSTIIYVTHDQVEAMTLADKIVVLSPLKAEAA TNLEQFGSPLDLYHNPDNKFVAGFIGSPKMNFLAGELLEIGEQECLVKLTSGDTVRAR VDARTGAVGDKVELGIRPEHLMPLDHPHAHSKVSGIVQVAEHLGAESFVYMDVDGHDF TVKATSDVDVATGQTYSVGIPAEACYLFDAKEQAFPRTAKYIRT" misc_feature 1667480..1668592 /locus_tag="B565_1498" /note="maltose/maltodextrin transporter ATP-binding protein; Provisional; Region: PRK11000" /db_xref="CDD:182893" misc_feature 1667489..1668109 /locus_tag="B565_1498" /note="The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two...; Region: ABC_MalK_N; cd03301" /db_xref="CDD:73060" misc_feature 1667594..1667617 /locus_tag="B565_1498" /note="Walker A/P-loop; other site" /db_xref="CDD:73060" misc_feature order(1667603..1667608,1667612..1667620,1667732..1667734, 1667960..1667965,1668062..1668064) /locus_tag="B565_1498" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73060" misc_feature 1667723..1667734 /locus_tag="B565_1498" /note="Q-loop/lid; other site" /db_xref="CDD:73060" misc_feature 1667888..1667917 /locus_tag="B565_1498" /note="ABC transporter signature motif; other site" /db_xref="CDD:73060" misc_feature 1667948..1667965 /locus_tag="B565_1498" /note="Walker B; other site" /db_xref="CDD:73060" misc_feature 1667972..1667983 /locus_tag="B565_1498" /note="D-loop; other site" /db_xref="CDD:73060" misc_feature 1668050..1668070 /locus_tag="B565_1498" /note="H-loop/switch region; other site" /db_xref="CDD:73060" misc_feature 1668212..1668373 /locus_tag="B565_1498" /note="TOBE domain; Region: TOBE_2; cl01440" /db_xref="CDD:163979" misc_feature 1668347..1668565 /locus_tag="B565_1498" /note="TOBE domain; Region: TOBE_2; cl01440" /db_xref="CDD:163979" gene complement(1668729..1669544) /locus_tag="B565_1499" /db_xref="GeneID:10487416" CDS complement(1668729..1669544) /locus_tag="B565_1499" /codon_start=1 /transl_table=11 /product="polyphosphate kinase 2" /protein_id="YP_004392151.1" /db_xref="GI:330829199" /db_xref="GeneID:10487416" /translation="MEKEKSKKRPRLDKKCYEHHLAHLQEELVKLQEWVKQEGLKVVV LFEGRDAAGKGGVIKAITEPLNPRVCRVTALPAPSDRERSQWYFQRYVAHLPAAGEMV LFDRSWYNRAGVERVMGFCSDAEYREFLRACPEFERMLIRSGITLIKYWFSVSDEEQE KRFKERINTPIKRWKFSPMDLQSRSRWVEYSRAKDDMFTYTDTEDCPWFVVEADDKRR ARLNCIAHLLSKVPYEAIHYEPIKLPPIKTEGYERPPLASQTFVPDITAELEA" misc_feature complement(1668825..1669514) /locus_tag="B565_1499" /note="Polyphosphate kinase 2 (PPK2); Region: PPK2; cl11971" /db_xref="CDD:189242" gene 1669673..1670473 /locus_tag="B565_1500" /db_xref="GeneID:10487417" CDS 1669673..1670473 /locus_tag="B565_1500" /codon_start=1 /transl_table=11 /product="alpha/beta fold family hydrolase" /protein_id="YP_004392152.1" /db_xref="GI:330829200" /db_xref="GeneID:10487417" /translation="MKHFMEIAGRRMAYLDEGQGPVLLFGHSYLWDSAMWAPQIEALK ASYRCIVPELWGHGDSDLLPEGGSTLATLARDHLALLDALGVDEFVLVGLSIGGMWGV ELARMVPNRLKGLVLMDSFVGLEPQITCERYLGMLAAIEQLGSIPAPIIEQVAPIFFA NQPDANLLADFKARLAAWPNEKIAAMVAVGRSFVTREDRIEWLEEITTPALVMTGCED KARPVLEGYLMAEVLGCPFREIPMAGHISSLENPAFVNQQLAGFLAAL" misc_feature 1669718..1670464 /locus_tag="B565_1500" /note="3-oxoadipate enol-lactonase; Region: protocat_pcaD; TIGR02427" /db_xref="CDD:131480" gene complement(1670585..1671391) /locus_tag="B565_1501" /db_xref="GeneID:10487418" CDS complement(1670585..1671391) /locus_tag="B565_1501" /codon_start=1 /transl_table=11 /product="MltA-interacting protein MipA" /protein_id="YP_004392153.1" /db_xref="GI:330829201" /db_xref="GeneID:10487418" /translation="MTFFRQIRAAGLTALLLAAAMPARADIDLGAMDLLTSDSPTSPV PQGFVAGAALIGGQARYEAQDNSLYAIPGFIYFGDQFMFLGDRARYYFHKDENVALYG YGRVRFGNLDPEDSPAFTGMEQRKWQLEGGIGGNIITPYALLTVRANSDVTGRSKGQE LLLWADFPILRDNLLIMPGMGLMLRSDKMANYYFGGISESEETAQRPAWDTGTTLSPM AALITSYRFSPNWIGMFAMNYEWYDRDIKNSPIVQHDGELYAGFALGYIW" misc_feature complement(1670594..1671250) /locus_tag="B565_1501" /note="MltA-interacting protein MipA; Region: MipA; cl01504" /db_xref="CDD:154438" gene complement(1671427..1672497) /locus_tag="B565_1502" /db_xref="GeneID:10487419" CDS complement(1671427..1672497) /locus_tag="B565_1502" /codon_start=1 /transl_table=11 /product="Permease PerM" /protein_id="YP_004392154.1" /db_xref="GI:330829202" /db_xref="GeneID:10487419" /translation="MLEVLKRWYQTRFSDPDAVTLFLLLVFCFTIIWLFGDLLAPLLV ALVMAYLLEWPVARLQKAGLSRTLATSVILILFIAVAVASLLGLIPTLVSQGINLAKE APAMLTHAQDYVRTLPDKYPELIDVSLVETVIDNIRQRILSGGEHLVSASLSSLVNVV AIMIYLILVPLMVFFMLKDKRVLMGSLRRFLPRNRTLVNRVWVEMNNQIINYIRGKVI EILIVGIATYVPFALMGLRYSVLLAVAVGFSVLIPYIGAAVVTVPVAMVALFQWGLTP EFAWLMVAYLVIQALDGNLLVPVLFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPL ATLVKAVINAWPKREEMPSAAK" misc_feature complement(1671460..1672407) /locus_tag="B565_1502" /note="Domain of unknown function DUF20; Region: UPF0118; cl00465" /db_xref="CDD:186015" gene complement(1672523..1672756) /locus_tag="B565_1503" /db_xref="GeneID:10487420" CDS complement(1672523..1672756) /locus_tag="B565_1503" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392155.1" /db_xref="GI:330829203" /db_xref="GeneID:10487420" /translation="MEVLDLTPWRCPEPLIRLKLWLRVAKSGQTVTIRLADAGSRQDI PAYLHRQGHHVEVQQQPDNTLSLQLVVGAKQPS" misc_feature complement(1672556..1672750) /locus_tag="B565_1503" /note="SirA, YedF, and YeeD. Two-layered alpha/beta sandwich domain. SirA (also known as UvrY, and YhhP) belongs to a family of bacterial two-component response regulators that controls secondary metabolism and virulence. The other member of this two-...; Region: SirA_YedF_YeeD; cd00291" /db_xref="CDD:48205" misc_feature complement(order(1672709..1672711,1672715..1672726, 1672733..1672735,1672742..1672747)) /locus_tag="B565_1503" /note="CPxP motif; other site" /db_xref="CDD:48205" gene 1672878..1674332 /locus_tag="B565_1504" /db_xref="GeneID:10487421" CDS 1672878..1674332 /locus_tag="B565_1504" /codon_start=1 /transl_table=11 /product="Zinc metalloprotease" /protein_id="YP_004392156.1" /db_xref="GI:330829204" /db_xref="GeneID:10487421" /translation="MARFSPLMASLPLLASLMGATFHAEANNQLPDIGTAGVAALPIE QEVRYGNAFMRFARAGLPIIDDPVLSQYIDDLGQRLLTNADGVRFPFTFFLINDPTIN AAAFLGGRVKVHTGLFLYADSESELASVLAHEITHVTQRHIARYMEAQASSSAVTLAG LVGSIALAVINPTAGIAALQTTLGLSMQSAINYTRDNEYEADRIGMKTLYDAGFDPMG MANFFQKLAAEYRYASKPPEMLLTHPLPETRISEARARAGSYGRRDLPPSLDFWLAKV RIQVRFGTDTPQGLLSYFDSRIQKGDYPLKDAAIYGKALALIQLKRTDEADTLMQELA ARHPEDLFIVDAQTDIDLAKGRSAQAIARLEKFRSRMPDNEVVVVNLGNAYLESGNYK KSIAILDPYARAHEENNLAWNLLADAYRKAGRMTELHMARAEMLALRGDYQAAIDELI VARGTTSDRMTLARLEARITELERAKKDLDSLKG" misc_feature 1672965..1674323 /locus_tag="B565_1504" /note="Putative Zn-dependent protease, contains TPR repeats [General function prediction only]; Region: COG4783" /db_xref="CDD:34394" misc_feature 1672989..1673633 /locus_tag="B565_1504" /note="Peptidase family M48; Region: Peptidase_M48; cl12018" /db_xref="CDD:187163" misc_feature 1673931..1674149 /locus_tag="B565_1504" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature order(1673955..1673957,1673967..1673969,1673976..1673978, 1674021..1674023,1674057..1674059,1674069..1674071, 1674078..1674080,1674123..1674125) /locus_tag="B565_1504" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature order(1674012..1674017,1674021..1674026,1674033..1674038, 1674114..1674119,1674126..1674131,1674138..1674143) /locus_tag="B565_1504" /note="binding surface" /db_xref="CDD:29151" gene complement(1674422..1674904) /locus_tag="B565_1505" /db_xref="GeneID:10487422" CDS complement(1674422..1674904) /locus_tag="B565_1505" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="YP_004392157.1" /db_xref="GI:330829205" /db_xref="GeneID:10487422" /translation="MVRVSGSGKELKRICWLIVAGLLGACTPAPEFTDATGQSVSLRH FAGKPLLVNYFAPWCAPCLREMPRLNRLAAEGQITVVAINYDPTTPAELDKLAAQYHI KVPLLIANEDASLPFPRPSGLPTSYLLDSEGKLKQTLVGELDQQQIEMLKATASSLSH " misc_feature complement(1674482..1674814) /locus_tag="B565_1505" /note="TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing...; Region: TlpA_like_family; cd02966" /db_xref="CDD:48515" misc_feature complement(order(1674719..1674721,1674728..1674730)) /locus_tag="B565_1505" /note="catalytic residues [active]" /db_xref="CDD:48515" gene 1674965..1675315 /locus_tag="B565_1506" /db_xref="GeneID:10487423" CDS 1674965..1675315 /locus_tag="B565_1506" /codon_start=1 /transl_table=11 /product="arsenate reductase" /protein_id="YP_004392158.1" /db_xref="GI:330829206" /db_xref="GeneID:10487423" /translation="MSETQIYHNPRCSKSRETLALLEQHGIAPDVVFYLEQAPSEDEI RNLLSLLGFSDPRQLMRTKEDLYKELGLAGVSGDALVRAMHQHPKLIERPIVIKNGQA RIGRPPEQVLEILK" misc_feature 1674977..1675306 /locus_tag="B565_1506" /note="Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the...; Region: ArsC_ArsC; cd03034" /db_xref="CDD:48583" misc_feature order(1674998..1675000,1675145..1675147,1675241..1675243, 1675280..1675282) /locus_tag="B565_1506" /note="catalytic residues [active]" /db_xref="CDD:48583" gene 1675312..1675695 /locus_tag="B565_1507" /db_xref="GeneID:10487424" CDS 1675312..1675695 /locus_tag="B565_1507" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392159.1" /db_xref="GI:330829207" /db_xref="GeneID:10487424" /translation="MSTRFARWLTLVGFFGLLCWVILWHLWLSPHPDLNPWLLPVIWT VPLLFPLKGIVQGNPYTHAWGNFVLMPYFLHALTLITTDEGERWLAVVELVFTTLAFV GTIYYARLRGRELGLSIRKKKDEAN" misc_feature 1675330..1675656 /locus_tag="B565_1507" /note="Predicted membrane protein (DUF2069); Region: DUF2069; cl01299" /db_xref="CDD:154321" gene complement(1675752..1676360) /locus_tag="B565_1508" /db_xref="GeneID:10487425" CDS complement(1675752..1676360) /locus_tag="B565_1508" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392160.1" /db_xref="GI:330829208" /db_xref="GeneID:10487425" /translation="MNFLAHLHLAAHTRSSLTGNLLGDFVKGTLPTGLAAHFDEGIWL HRKIDAFTDSHPEHKAAVACFEAPWRRFGGIVVDMIYDHWLSQHWELFSTEPLPRFLQ RSYEQLLADHPRLQDGLPLPLKRMAEQNWIASYRHREGLGQALNGIGRRLRRPVQLGE ALLTLDESQWQTCEAGFLRFYPALMDFSQQQLAQYRAAQGPQ" misc_feature complement(1675788..1676360) /locus_tag="B565_1508" /note="Protein of unknown function, DUF479; Region: DUF479; cl01203" /db_xref="CDD:186382" gene 1676747..1677529 /locus_tag="B565_1509" /db_xref="GeneID:10487426" CDS 1676747..1677529 /locus_tag="B565_1509" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter amino acid-binding protein" /protein_id="YP_004392161.1" /db_xref="GI:330829209" /db_xref="GeneID:10487426" /translation="MMKIRLTLSALFVASLLATPAMAKEWKTVRFGVEGAYPPFSWTD ASGEIKGFDIDLANALCQQMAVKCELVAQDWDGMIPALLSRKYDAIIAAMSITDERRQ KVDFTEKYAHIPNRFVAAKGTELTLTPEGMAGKRIGVQRATTHDKYLTDNFGSNVTIV RYGNADEAYLDLKAGRVLALLADASAIEQGLLGKEGGDKFDYVGPALTDRQWFGDGMG IAVRKSDKELKGKLDEAIKALRANGIYQQINQKYFKYDIYGG" misc_feature 1676768..1677505 /locus_tag="B565_1509" /note="lysine-arginine-ornithine-binding periplasmic protein; Region: 3A0103s03R; TIGR01096" /db_xref="CDD:162200" misc_feature 1676831..1677505 /locus_tag="B565_1509" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature order(1676855..1676857,1676969..1676971,1677044..1677046, 1677176..1677178,1677293..1677295) /locus_tag="B565_1509" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(1677242..1677244,1677254..1677256,1677272..1677274) /locus_tag="B565_1509" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 1677383..1677400 /locus_tag="B565_1509" /note="hinge residues; other site" /db_xref="CDD:29040" gene 1677596..1678726 /locus_tag="B565_1510" /db_xref="GeneID:10487427" CDS 1677596..1678726 /locus_tag="B565_1510" /codon_start=1 /transl_table=11 /product="Isoaspartyl dipeptidase" /protein_id="YP_004392162.1" /db_xref="GI:330829210" /db_xref="GeneID:10487427" /translation="MLTLIEGAEIFSPTHLGQQDLLVADGRIAWMGKGLTVPTNWPLH RVDGRGRYLVPGLVDPLAHITGGGGEGGFAFRTPELAASEALKAGVTTLVAALGTDSL TRTPAQVLGKVREFRAAGVSAFMYTGSYHLPVKTLTGTVESDIILIPEVLGVGEVAIS DHRSSAPTHDELARLASEARVAGLLAGKSGVSFFHVGDGKGALAPLRALRDETDIPLR QLYPTHCNRNPWLFAEAIEWGKAGGWVDLTTSSFPDLLEDGERLAADAFLELLAANVP ADRITFSSDANASLPRFDGEGRLIEMRCGQIASLWQQCVRATRLGVSLERALAAVTSN PAQALGLGSKGRIGVGQDADLLLVHDRTFAIERVMSGGLWRE" misc_feature 1677596..1678717 /locus_tag="B565_1510" /note="isoaspartyl dipeptidase; Provisional; Region: PRK10657" /db_xref="CDD:182623" misc_feature 1677599..1678711 /locus_tag="B565_1510" /note="Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have...; Region: metallo-dependent_hydrolases; cl00281" /db_xref="CDD:193747" misc_feature order(1677776..1677778,1677782..1677784,1678178..1678180, 1678265..1678267,1678448..1678450) /locus_tag="B565_1510" /note="active site" /db_xref="CDD:30035" gene complement(1678822..1679724) /locus_tag="B565_1511" /db_xref="GeneID:10487428" CDS complement(1678822..1679724) /locus_tag="B565_1511" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="YP_004392163.1" /db_xref="GI:330829211" /db_xref="GeneID:10487428" /translation="MLLNVLLILLPLAIGYLVPLSSARLIKLVNQSLGKMVYLILFLM GLGLAYVENLGSNLAVIFKVAGVMLTAITVCNLLALWWLDKRTPPTHEASDAKMPGKL HLLWESLQLCFVVLGGVLLGLLVDLRALPIDKWSEWALMLLLFLIGVQMRNSGMRLRQ ILLNPWGMKIAATVILSSWLGSLLAAQLLGMPFAHGLAMSSSFGWYSLSGILVADKLG PVLGSAAFINDLGRELIAILIIPVLMRRHPSAAIGYGGATALDFTLPVIQKSGGIQVV PVAIVSGFILSLLGPILILGFLAI" misc_feature complement(1678882..1679655) /locus_tag="B565_1511" /note="Membrane protein of unknown function (DUF340); Region: DUF340; cl01028" /db_xref="CDD:194012" gene 1680258..1681028 /locus_tag="B565_1512" /db_xref="GeneID:10487429" CDS 1680258..1681028 /locus_tag="B565_1512" /codon_start=1 /transl_table=11 /product="histidine ABC transporter ATPase" /protein_id="YP_004392164.1" /db_xref="GI:330829212" /db_xref="GeneID:10487429" /translation="MSDVAALEVRDLHKYFGTHEVLKGIDMTAHKGDVISLIGSSGSG KSTFLRCINLLETPSSGTVSLHGELIRMKTSRAGERLPEDMRQVERIRSRLAMVFQSF NLWSHMTIMQNIIEVPIQVLKVPRAEALAKAEQLLNRVGLWERRDYYPGHLSGGQQQR AAIARALAVEPEVMLFDEPTSALDPELVGEVLGLMRELAEEGRTMLVVTHEMSFARDV SNKVMFLHQGRVEEEGNPKEIFAHPKSERFKQFISSIY" misc_feature 1680273..1681025 /locus_tag="B565_1512" /note="ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]; Region: HisP; COG4598" /db_xref="CDD:34233" misc_feature 1680276..1680947 /locus_tag="B565_1512" /note="HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP; Region: ABC_HisP_GlnQ_permeases; cd03262" /db_xref="CDD:73021" misc_feature 1680372..1680395 /locus_tag="B565_1512" /note="Walker A/P-loop; other site" /db_xref="CDD:73021" misc_feature order(1680381..1680386,1680390..1680398,1680555..1680557, 1680786..1680791,1680885..1680887) /locus_tag="B565_1512" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73021" misc_feature 1680546..1680557 /locus_tag="B565_1512" /note="Q-loop/lid; other site" /db_xref="CDD:73021" misc_feature 1680714..1680743 /locus_tag="B565_1512" /note="ABC transporter signature motif; other site" /db_xref="CDD:73021" misc_feature 1680774..1680791 /locus_tag="B565_1512" /note="Walker B; other site" /db_xref="CDD:73021" misc_feature 1680798..1680809 /locus_tag="B565_1512" /note="D-loop; other site" /db_xref="CDD:73021" misc_feature 1680873..1680893 /locus_tag="B565_1512" /note="H-loop/switch region; other site" /db_xref="CDD:73021" gene 1681078..1681851 /locus_tag="B565_1513" /db_xref="GeneID:10487430" CDS 1681078..1681851 /locus_tag="B565_1513" /codon_start=1 /transl_table=11 /product="histidine/lysine/arginine/ornithine ABC transporter periplasmic binding protein" /protein_id="YP_004392165.1" /db_xref="GI:330829213" /db_xref="GeneID:10487430" /translation="MNKLMLATAVVTALASGSLMAKEWKEVRIGVEGAYPPFSWTEPS GEVKGFDIDIANALCEEMKVKCTLVKQDWDGIIPALLSRKFDAIIATMDITEERKKKV DFTQKYQHIPARFAAKKGTDVQLDKAFMEGKSVAVQRATSMDTFITDNFPNATIKRYG TADEAYLDLKSGRVDYVLADSAAITDGLLKKEGGDAFEFVGPKLTDPKWFGEGAGIAV RKADKDLKEKFNAAILALRANGKYKEINDKYFEFDVYGE" misc_feature 1681123..1681827 /locus_tag="B565_1513" /note="lysine-arginine-ornithine-binding periplasmic protein; Region: 3A0103s03R; TIGR01096" /db_xref="CDD:162200" misc_feature 1681156..1681827 /locus_tag="B565_1513" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature order(1681180..1681182,1681294..1681296,1681369..1681371, 1681501..1681503,1681615..1681617) /locus_tag="B565_1513" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(1681564..1681566,1681576..1681578,1681594..1681596) /locus_tag="B565_1513" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 1681705..1681722 /locus_tag="B565_1513" /note="hinge residues; other site" /db_xref="CDD:29040" gene 1682004..1682777 /locus_tag="B565_1514" /db_xref="GeneID:10487431" CDS 1682004..1682777 /locus_tag="B565_1514" /codon_start=1 /transl_table=11 /product="histidine/lysine/arginine/ornithine ABC transporter permease" /protein_id="YP_004392166.1" /db_xref="GI:330829214" /db_xref="GeneID:10487431" /translation="MREDSVAMELHMFDLKGYEASLLEGAWVTLEVALASLLLALLLG MLGALAKLSPYKWARAIATGYTTIIRGIPDLVLMMLLFFGGQVLINGICTWVNETYNS WLLESNPNQEWVSLLPDYIDISPFVAGVATIGFIFGAYMTETFRGAILAVDKGELEAA RAFGMRATQVFVRILFPQMMRHALPGFGNNWLVLLKTTALVSIIGLDDMVRKASLAAG STQQPFTFYMAVALIFLIFTAVSTSALKWAERHYAIKTR" misc_feature 1682040..1682774 /locus_tag="B565_1514" /note="ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; Region: ArtQ; COG4215" /db_xref="CDD:33942" misc_feature 1682169..1682729 /locus_tag="B565_1514" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(1682187..1682198,1682202..1682231,1682238..1682243, 1682247..1682249,1682406..1682411,1682415..1682417, 1682421..1682423,1682430..1682435,1682439..1682441, 1682451..1682456,1682463..1682465,1682514..1682516, 1682556..1682561,1682568..1682570,1682589..1682600, 1682607..1682612,1682649..1682654,1682682..1682687, 1682694..1682699,1682703..1682708,1682715..1682720, 1682727..1682729) /locus_tag="B565_1514" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(1682205..1682249,1682589..1682606) /locus_tag="B565_1514" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(1682247..1682249,1682391..1682393,1682607..1682609, 1682643..1682645,1682652..1682654,1682682..1682684) /locus_tag="B565_1514" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(1682466..1682504,1682520..1682525,1682535..1682537) /locus_tag="B565_1514" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 1682781..1683473 /locus_tag="B565_1515" /db_xref="GeneID:10487432" CDS 1682781..1683473 /locus_tag="B565_1515" /codon_start=1 /transl_table=11 /product="histidine/lysine/arginine/ornithine ABC transporter permease" /protein_id="YP_004392167.1" /db_xref="GI:330829215" /db_xref="GeneID:10487432" /translation="MDFSIILKEWPTYWEGLYTTVWLVALSLILGLMLAVPMGILRNS RNWLIKGPIWAYIYFFRGTPLLVQLFIIYYGAAQWEWLKNSAAWSLFSEAWFCALLAF TLNTAAYTAEIVRGAVHNMPRGQIEAANAFGMTRWQTLTRIILPNSFRRALPAYSNEV IFMLQGSAVAGIITIVDLTGAARIINSRYYSPFEAFLTAGLLYMLLTFVIVWLFKKWE ARWHAHLRPRNV" misc_feature 1682808..1683464 /locus_tag="B565_1515" /note="ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; Region: ArtQ; COG4215" /db_xref="CDD:33942" misc_feature 1682829..1683416 /locus_tag="B565_1515" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(1682877..1682882,1682889..1682894,1682907..1682909, 1682937..1682948,1682952..1682981,1682988..1682993, 1682997..1682999,1683090..1683095,1683099..1683101, 1683105..1683107,1683114..1683119,1683123..1683125, 1683135..1683140,1683147..1683149,1683198..1683200, 1683240..1683245,1683252..1683254,1683273..1683284, 1683291..1683296,1683333..1683338,1683366..1683371, 1683378..1683383,1683387..1683392,1683399..1683404, 1683411..1683416) /locus_tag="B565_1515" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(1682955..1682999,1683273..1683290) /locus_tag="B565_1515" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(1682997..1682999,1683075..1683077,1683291..1683293, 1683327..1683329,1683336..1683338,1683366..1683368) /locus_tag="B565_1515" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(1683150..1683188,1683204..1683209,1683219..1683221) /locus_tag="B565_1515" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 1683650..1684309 /locus_tag="B565_1516" /db_xref="GeneID:10487433" CDS 1683650..1684309 /locus_tag="B565_1516" /codon_start=1 /transl_table=11 /product="Pseudouridine synthase" /protein_id="YP_004392168.1" /db_xref="GI:330829216" /db_xref="GeneID:10487433" /translation="MYRILFEHPAFLVIDKQPGIGMHDEKDDGEAVNPGLVNRVKADT GLTLYPVHRLDKMTSGLVLLARTTEANRELSMAFAAREVSKQYLALSDRKPKKKQGWV KGDMQKGRGGSWMLVRTLDNPAISWFDSVSVREGLRLYRIKPQTGKTHQIRVALKSIG APILGDKRYGGTPSDRGYLHAWRLSFTLSGEPFDFVCPPDVGSEFVTPELMVAISALA P" misc_feature 1683680..1684207 /locus_tag="B565_1516" /note="PseudoU_synth_RsuA/RluD: Pseudouridine synthase, RsuA/RluD family. This group is comprised of eukaryotic, bacterial and archeal proteins similar to eight site specific Escherichia coli pseudouridine synthases: RsuA, RluA, RluB, RluC, RluD, RluE, RluF...; Region: PseudoU_synth_RluCD_like; cd02869" /db_xref="CDD:30029" misc_feature order(1683803..1683814,1684106..1684108) /locus_tag="B565_1516" /note="active site" /db_xref="CDD:30029" gene 1684315..1685004 /locus_tag="B565_1517" /db_xref="GeneID:10487434" CDS 1684315..1685004 /locus_tag="B565_1517" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392169.1" /db_xref="GI:330829217" /db_xref="GeneID:10487434" /translation="MRPASDTIIYSAKERDPDGRAPRWILADFDDTLASGDSHAGLLR YILRRRIWPLLLLPVIALGGLVYLLPSQRRRGISLIWWAISLGLSPLGWRKLVRAYCR TRPGLYRQARELLQSEGARCWVISASPCALVRAQLYQQLPGQLPHRIIGSQMHYRFGG LMPRFYCHGQHKLLPEICALDAELALSDSLHDLPLLGLGKEAWLINPTPVRLQKARVC LPHLMVKNWQL" misc_feature <1684594..1684977 /locus_tag="B565_1517" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" gene 1685229..1686365 /locus_tag="B565_1518" /db_xref="GeneID:10487435" CDS 1685229..1686365 /locus_tag="B565_1518" /codon_start=1 /transl_table=11 /product="4-hydroxyphenylpyruvate dioxygenase" /protein_id="YP_004392170.1" /db_xref="GI:330829218" /db_xref="GeneID:10487435" /translation="MNATSSATHTINPLGTDGFEFVEYTAPDAKGIAALKSLFVSLGF AEVAKHKHKQCWLYRQGDINFVVNAEPHSQAEQFASLHGPSVCGMAFRVSDAGKAQQY AIAKGAKPFVGKIGPMELNIPAIYGIGESTLSFVDRYGDKGSIYDVDFVFYPDWQARM AEVDAGLMEIDHLTHNVHRGNMDVWSNFYERIGNFREIRYFDIEGKLTGLHSRAMTAP CGKIRIPINESADDKSQIEEYLRQYKGEGIQHIAMASSDIYHTIRTLRSRGTGFMPTP DTYYEKVNSRVEGHQEDLAALKELRILIDGSPTKDGILLQIFTDTVIGPVFFEIIQRK GNEGFGEGNFKALFESIELDQIRRGVLDGGEDEKGARKEGASDA" misc_feature 1685277..1686311 /locus_tag="B565_1518" /note="4-hydroxyphenylpyruvate dioxygenase; Region: 4HPPD; TIGR01263" /db_xref="CDD:162275" misc_feature 1685283..1685684 /locus_tag="B565_1518" /note="N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS); Region: HPPD_N_like; cd08342" /db_xref="CDD:176690" misc_feature order(1685316..1685318,1685328..1685333,1685337..1685342, 1685388..1685390,1685394..1685396,1685478..1685480) /locus_tag="B565_1518" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:176690" misc_feature 1685727..1686284 /locus_tag="B565_1518" /note="C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS); Region: HPPD_C_like; cd07250" /db_xref="CDD:176673" misc_feature order(1685742..1685744,1685862..1685864,1685901..1685903, 1685907..1685909,1685931..1685933,1685976..1685978, 1686180..1686182,1686213..1686215,1686243..1686245, 1686255..1686260) /locus_tag="B565_1518" /note="active site" /db_xref="CDD:176673" misc_feature order(1685742..1685744,1685976..1685978,1686213..1686215) /locus_tag="B565_1518" /note="Fe binding site [ion binding]; other site" /db_xref="CDD:176673" gene 1686358..1687509 /locus_tag="B565_1519" /db_xref="GeneID:10487436" CDS 1686358..1687509 /locus_tag="B565_1519" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="YP_004392171.1" /db_xref="GI:330829219" /db_xref="GeneID:10487436" /translation="MRNWINFPHREGTHSRQAHADLPEQAIYERELGRSGFFGPATHM HHKHAPTDWSSWEGPLRPRLFDLNALQEEVSSLSPWVAPDILSNPHCRYRIWRLSEAM PFLVRNADGDELLFIHEGSGEFFCDYGHLTLRDGDYVVIPRGTMWRIEPTAPLFILMI EATNDSYQLPDKGLVGNHAIFDPAALDVPAINERFLAQQDENPWSLQVKRHDQVSVIT WPFNPLDAQGWHGDLCVVRLNWRDIRPLMSHRYHLPPSAHSTFVASRFVICTFVPRPI ESDPGALKVPFYHSNDDYDEVLFYHAGDFFSRDNIERGMVTFHPAGFTHGPHPKAFAA GQAYAKKFTDEVAVMLDTRDALNVGSLCEGIENTRYVSSWQRLGAAAGK" misc_feature 1686367..1687488 /locus_tag="B565_1519" /note="homogentisate 1,2-dioxygenase; Region: HgmA; cl10473" /db_xref="CDD:195972" gene 1687520..1688515 /locus_tag="B565_1520" /db_xref="GeneID:10487437" CDS 1687520..1688515 /locus_tag="B565_1520" /codon_start=1 /transl_table=11 /product="fumarylacetoacetate hydrolase family protein" /protein_id="YP_004392172.1" /db_xref="GI:330829220" /db_xref="GeneID:10487437" /translation="MKLATLNNGKRDGALVVVSRDLTRAVRVSEIAPTLQAALDEWAE VAPRLEVVYQQLNEGRVAEAFPFDEASCLSPLPRAYQWADGSAYVNHVELVRKARGAE MPESFWHDPLMYQGGSDSFLAPRGPIAMGSEVWGIDFESEVAIITDDVPMGVSAQEAA SHVKLLMLVNDVSLRNLIPGELAKGFGFFQSKPSSAFSPVAITPDELGDDWRDGKVHL PLLTHLNGALFGAPEAGVDMTFNFFELIAHAAKTRPLGAGCIIGSGTVSNYDRSAGSS CIAERRMLEILDCDQAITPYLQFGDRVSIAMEDRSGQNLFGTISQQVVPASGQGG" misc_feature 1687556..1688497 /locus_tag="B565_1520" /note="2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]; Region: MhpD; COG0179" /db_xref="CDD:30528" misc_feature 1687763..1688491 /locus_tag="B565_1520" /note="Fumarylacetoacetate (FAA) hydrolase family; Region: FAA_hydrolase; cl11421" /db_xref="CDD:196225" gene 1688656..1689291 /locus_tag="B565_1521" /db_xref="GeneID:10487438" CDS 1688656..1689291 /locus_tag="B565_1521" /codon_start=1 /transl_table=11 /product="Maleylacetoacetate isomerase" /protein_id="YP_004392173.1" /db_xref="GI:330829221" /db_xref="GeneID:10487438" /translation="MLQLFGYWRSSASFRVRIVLQLKGLAYEQHPINLRQGEQSEKAY RRINPQGLVPFLVDGDVQIGQSVAIMEYLDETYPAYSLMPSSPDARARVRQIVNMIAC DIHPLNNLRVLNYLEEHFRANNEQEARWYRYWIDETFTALEQLLMTTAGVYCVGNEVT LADCMLVPQVYNARRYDMTLDDYPTIRRIVANCEQLQAFIKAAPANQPDAQ" misc_feature 1688659..1688877 /locus_tag="B565_1521" /note="GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens...; Region: GST_N_Zeta; cd03042" /db_xref="CDD:48591" misc_feature 1688662..1689285 /locus_tag="B565_1521" /note="maleylacetoacetate isomerase; Region: maiA; TIGR01262" /db_xref="CDD:162274" misc_feature order(1688677..1688679,1688695..1688700,1688704..1688706, 1688740..1688742,1688854..1688856,1688866..1688868) /locus_tag="B565_1521" /note="C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48591" misc_feature order(1688683..1688685,1688689..1688691,1688698..1688700, 1688770..1688772,1688809..1688814,1688848..1688853) /locus_tag="B565_1521" /note="GSH binding site (G-site) [chemical binding]; other site" /db_xref="CDD:48591" misc_feature order(1688809..1688811,1688845..1688850,1688854..1688859, 1688866..1688868) /locus_tag="B565_1521" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:48591" misc_feature 1688914..1689276 /locus_tag="B565_1521" /note="GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens...; Region: GST_C_Zeta; cd03191" /db_xref="CDD:48118" misc_feature order(1688923..1688925,1688935..1688937,1688947..1688949, 1689043..1689045,1689085..1689087) /locus_tag="B565_1521" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48118" misc_feature order(1688935..1688937,1688947..1688949,1688983..1688985, 1689145..1689147,1689154..1689156,1689169..1689171, 1689178..1689180,1689259..1689261,1689265..1689267, 1689274..1689276) /locus_tag="B565_1521" /note="N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48118" misc_feature order(1688968..1688970,1688977..1688979,1688983..1688985, 1689169..1689171,1689178..1689180) /locus_tag="B565_1521" /note="putative maleylacetoacetate (MAA) substrate binding site (H site); other site" /db_xref="CDD:48118" gene 1689749..1691245 /locus_tag="B565_1522" /db_xref="GeneID:10487439" CDS 1689749..1691245 /locus_tag="B565_1522" /codon_start=1 /transl_table=11 /product="Dipeptidase" /protein_id="YP_004392174.1" /db_xref="GI:330829222" /db_xref="GeneID:10487439" /translation="MHSFKKCVVALSINLALFSSAFACTTLLVGSEASADGSMMVARS ADSDALKAQHFVIHPAKQGQSGMHSSKAHNGANDFRYPLPKNSLRYTTVPNWKTQLHG ATGFNEKGVGVSGTESIFASPEALAFDPYVEEKGITEDDIPDVLLSGSTSAREAVALL GNIIETIGAGEGFGVAVVDDNELWYLETATGHHWMAQRLPKNHYFATGNQGRLQQYDP ASADMMGSKNLIEFATEKGLYHPQKEGAFNFSKAYTRDDERDRTYNDPRVWTIQQMFN PSLKQAVDAGRQFPVTLSPEKKMTLEEVKAVLRNHYDGTEHDPYSKGLNGQEPWRPVS VFRTYESHVMQVRPWMPREVGEVTYVGLGMADLTAFVPYYSGLEAYPAHYAMGSDKAD SDSIYWKYRKLQTLIMTDYPKLAPMVKQAYQSWEAKIAKEQKEMEANYLKTVKTDKVA ANSMLNDFNLRVMQEAETLTEDLTNQIFTVRTQDIQADIFFANKAKKD" misc_feature 1689815..1691017 /locus_tag="B565_1522" /note="Peptidase family C69; Region: Peptidase_C69; cl01920" /db_xref="CDD:120966" gene 1691730..1692968 /locus_tag="B565_1523" /db_xref="GeneID:10487440" CDS 1691730..1692968 /locus_tag="B565_1523" /codon_start=1 /transl_table=11 /product="peptidase T" /protein_id="YP_004392175.1" /db_xref="GI:330829223" /db_xref="GeneID:10487440" /translation="MHIVDRFLGYTAINTTTNREAGAAGVMPSSPGQRVLADKVAQEL IALGLTVEVADNAILTATLPANVAGDLPTVAFFAHLDTSAEHTNDTHAQVVAYKGGDI CLNADQQITLRLSEFPELANYVGDRIIVTDGTSLLGADDKAAIAAIVNAVAYLQAHPE IPHGTIKIGLVPDEEQGLRGAKAFDTERFGADFAYTLDCCGIGELVYENWNAGDAEFV FHGASAHPMSAKGKLKNSLLMAHKFIAMLPGGEAPEYTEGREGYYWVKQMQGNSAQTV LKLDVRDFTQDGYQQRMTLLDTLGKSCQALWGEQSVSYHLSDRYSNVFNSLQGENRYP IELALAAYETLGITPNPIPMRGGYDGAVLSQKGLPCPNLFTGAHNFHSIYEYLPVSSL EAASAVVIEIIKLTHARFSR" misc_feature 1691736..1692956 /locus_tag="B565_1523" /note="peptidase T; Region: peptidase-T; TIGR01882" /db_xref="CDD:130937" misc_feature 1691736..1692944 /locus_tag="B565_1523" /note="M20 Peptidase T specifically cleaves tripeptides; Region: M20_peptT; cd03892" /db_xref="CDD:193512" misc_feature order(1691964..1691966,1692147..1692149,1692249..1692254, 1692321..1692323,1692870..1692872) /locus_tag="B565_1523" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193512" misc_feature order(1691982..1691984,1692402..1692410,1692414..1692422, 1692426..1692428,1692432..1692434,1692438..1692443, 1692450..1692452,1692459..1692461,1692486..1692500, 1692513..1692515,1692519..1692545,1692792..1692794, 1692870..1692872) /locus_tag="B565_1523" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:193512" gene 1692978..1694351 /locus_tag="B565_1524" /db_xref="GeneID:10487441" CDS 1692978..1694351 /locus_tag="B565_1524" /codon_start=1 /transl_table=11 /product="anaerobic C4-dicarboxylate transporter DcuC" /protein_id="YP_004392176.1" /db_xref="GI:330829224" /db_xref="GeneID:10487441" /translation="MFQVVIAVLVIVLVARLILKGYRAEPVLFAAGLVLMVASQLAGW GSVLPKGVESTGITLFDPFEVMRDLFSSRAADLGLMIMSLMGFAHYMDHIGANDAVVR IAIRPLRRLRSPYVLLFFSYLLASALQLAIPSATGLAVLLMATLFPIMVGLGLSAASS AGVIATSLGVAYTPTAIDAIRATDAVGMGHNVIEYVYTYQGPAALATVLVVGLMHVFW QRRCDRLDGHQHKGAAVVDESAKEVGVPGFYAILPMLPIIMAVGFSSLFVDHIRLNVT TIVMISMFISMVVEAARTRDMKQVCGGFSHFLNGMGSAFSNVVGLLVAAGIFAHGIKV LGVIDIMIVGAEHVGLPAFAMAIVFALVTLAAAIIMGSGNAPFLAFVELIPQIAASMG VSTAAMILPMQQASHMGRAMSPVSGVIIAVASGAKLTPFAVIKRTSVPLMAGFVFHTL IVGSFYL" misc_feature 1693035..1694348 /locus_tag="B565_1524" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature 1693035..1694318 /locus_tag="B565_1524" /note="C4-dicarboxylate anaerobic carrier; Region: DcuC; pfam03606" /db_xref="CDD:112424" gene complement(1694453..1694977) /locus_tag="B565_1525" /db_xref="GeneID:10487442" CDS complement(1694453..1694977) /locus_tag="B565_1525" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392177.1" /db_xref="GI:330829225" /db_xref="GeneID:10487442" /translation="MDANTLSRICLLTALLASPSAMANDNVVVLQLGKAFSKEKLDIK IADAKFHHMFWRWGDSGCQFGLGVRAGTLKVEDEETARLGGGARIECQWGNWVTWLPG EMVWLDQYQFGTRGHGYKDYGGPFQFALGIGLGYAITKNWLIGYQYEHMSNAYMYDKN PGLDSHTLHIEYRF" misc_feature complement(1694456..>1694644) /locus_tag="B565_1525" /note="Lipid A 3-O-deacylase (PagL); Region: PagL; pfam09411" /db_xref="CDD:150172" gene 1696436..1698187 /locus_tag="B565_1526" /db_xref="GeneID:10487443" CDS 1696436..1698187 /locus_tag="B565_1526" /codon_start=1 /transl_table=11 /product="capsule transport protein KpsD" /protein_id="YP_004392178.1" /db_xref="GI:330829226" /db_xref="GeneID:10487443" /translation="MKIKSSRLSLMLWLITASFPVLSASAPNLAQSDGQTFGYQLANN KGLHSAPGGQANTDSTTGTFAQQNRQGMLLPGEADVRKLLPQAESGLPPPYGANLFAG GYETERSDGLNDNYLIAAGDKLNIWIWGAVNFSNVVTVDNQGNIFIPDVGPINVKNVP ASQVNGLVTSRIGDVFTNNVNVYVNLLTTTPVSVYVTGPVIRPGQYAGQSSDSVLYFL KRAGGIDSERGSYRQIKVLRQNRVIQQVDLYEFMRQGKMPILSFKDQDVILVEPQGPM INVAGKVRNPFRFELTQRNTLGAELINYALPLAKVSHVGVIGDRANGPFSVYLPYKDF ANIQLKDGDKVLFNDDMHAQVYDVQVSGSYMGPSYFTVRKQTKLHDLLNHIPIDPQLA DYQSIYLMRKSVAARQKEMLDESLNRLERSVFTAPASSDGEATIRAKEAELVMRFVEK ARKIQPLGKVVVADKGIIANIQLEQGDQIVIPNRTDLIQVGGEVLMPQAVVYNEKANL DDYVAWAGGFTERANDKRIAVVHANGLVEFKGQGSVQPGDQILVLPKVDNKTMQSVKD ITQIIYQIAVAANVAIK" misc_feature 1696697..1697350 /locus_tag="B565_1526" /note="Periplasmic protein involved in polysaccharide export, contains SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis]; Region: Wza; COG1596" /db_xref="CDD:31784" misc_feature 1696760..1696951 /locus_tag="B565_1526" /note="Polysaccharide biosynthesis/export protein; Region: Poly_export; pfam02563" /db_xref="CDD:145609" gene 1698253..1699053 /locus_tag="B565_1527" /db_xref="GeneID:10487444" CDS 1698253..1699053 /locus_tag="B565_1527" /codon_start=1 /transl_table=11 /product="capsule transport protein KpsM" /protein_id="YP_004392179.1" /db_xref="GI:330829227" /db_xref="GeneID:10487444" /translation="MNKPILNQTPRTSLQVLRDVVFGLLIRELKTRFGSYRLGYAWAL LDPLLMLAAFSLIFGLRGHGGFGGAPAPLFITAGYLPFLFFKNVVSKLQSAVSSNMGL FCYRQVTPFATFIARFVLEVIVGVVVGIILVLGLLWFGFDAIPNDPLLVILIYFLLMT FSFSLGILFSVICNLFQEANKFLDLLMMPLMFISCVMYPLISIPAQYQHLFLWNPLVH ALELIRSGWIAGYSSPNVSWEYLSGVTLLLLTFAMSCYRLSHRRLIAS" misc_feature 1698289..1699044 /locus_tag="B565_1527" /note="ABC-2 type transporter; Region: ABC2_membrane; cl11417" /db_xref="CDD:196223" gene 1699383..1699715 /locus_tag="B565_1528" /db_xref="GeneID:10487445" CDS 1699383..1699715 /locus_tag="B565_1528" /codon_start=1 /transl_table=11 /product="capsule transport protein KpsT" /protein_id="YP_004392180.1" /db_xref="GI:330829228" /db_xref="GeneID:10487445" /translation="MKEFSEIGQHFELPIKSYSSGMRSKFSFAVSMAFDFDVYLTDEI MSVGDARFKKKCIETFDQKRQTASLIMVSHDMKNLRQQCDMGILLRNSRLEIFDDIED AIRIYQNL" misc_feature <1699389..1699676 /locus_tag="B565_1528" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 1699434..1699463 /locus_tag="B565_1528" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 1699494..1699511 /locus_tag="B565_1528" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 1699518..1699529 /locus_tag="B565_1528" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 1699590..1699610 /locus_tag="B565_1528" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene 1699731..1700933 /locus_tag="B565_1529" /db_xref="GeneID:10487446" CDS 1699731..1700933 /locus_tag="B565_1529" /codon_start=1 /transl_table=11 /product="capsule transport protein KpsE" /protein_id="YP_004392181.1" /db_xref="GI:330829229" /db_xref="GeneID:10487446" /translation="MTQPIRSEKPSRFVRKLRKLSNEPKRFFIDSSGYQIAHRSWQTS LKLGSFLWVVLCFSIATVYFGFMASDRYVSRAELIIKQADQIKMLPDALSMLGIGGSN HQDVLLIQDYLKSWDMLAKLDKELSLKSHYQSSSADYFSRLSDNVSREDFIEYYRKHL TLHLDELSGVLTVELQTFDPQYGQQVVGLMLKESERFINKLGHQVAFDQLAFVEKEVD RAYQRLQDEKAKVLAFQNSHQLISPESTSSARLGVVSQIEGELVRQQAELKQLRSYMK DSAPTVISVQSRVDALTRQLEQERAKLTGQDKDAMNEITAGYLDVQTQASLAADLYKT GLISLEQARVEAYRKLKHLLVITQPTLAEDAEYPRRLYNLATVGVLLCLFYGLIVMAL ATLREHQD" misc_feature 1699860..1700930 /locus_tag="B565_1529" /note="polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family; Region: BexC_CtrB_KpsE; TIGR01010" /db_xref="CDD:130083" misc_feature 1699878..1700822 /locus_tag="B565_1529" /note="Vi polysaccharide export inner membrane protein VexD; Provisional; Region: PRK15178" /db_xref="CDD:185100" gene 1701058..1703988 /locus_tag="B565_1530" /db_xref="GeneID:10487447" CDS 1701058..1703988 /locus_tag="B565_1530" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392182.1" /db_xref="GI:330829230" /db_xref="GeneID:10487447" /translation="MSIISSIFSKNKNFKGFIDDISNGTITGWACTKNNKALEVLLYI NGDYYCSLVPNLYRDDLERANIGTGRYGFSVEMPKEIAALPEISVKMVAVQRGKKVEI HNKKILLNNDNPVNSKKKGSLGNIDRFVANTVHGWLGSSDQDVFPYLTANGKPCLIEL TGIQRSDVEQQHGFVNAGFVAKLPQCDHGNIKFELHSISMKGIEHIDTKIIRGGVLVP DSISAVFDAVKIAKQKDSVGIVVWEGTHNPIGRAQVLYNILKGKRPTLIISFNIGFSD QPVWQPLLNSDCKVLMLPWKDRELYKSLFKELDLNFDLVWICKPRYPAFVLAEYISHP NTRYIMDLDDNELEMSSSKAAKEKPYGLLSAKMAQRYIDRLPIRSVASKTLQDDFGGQ LVRHARVKQPVKRVRVCDLTQEVRVGFIGTVRPHKGVVEAAKAIKALNDRKGYNIKFV VGGIYDPMSIRSELISLGCEVHNEIDSSRLSYHLQNLDVIITGFPDDAANKEIIRYQI SSKIGDGLSNERPVLVPEGLSVADLDSVPGVYLFNSLNFERILIDAITNKSSISLDKQ FSLQWNYEQFNKLADAAMSDSPSGEQLFGVKSAKQLPTYTTNVVLVWKQHDTGLYGRR VDHIARLLAANGMKVTCLEIMAQEQFKRYEKESARVDADFRFIVEDYKKKRDGYNHDG IFYKTISLDHTQSTEQALKQYLIEQKIYPDNSKVILFPAVPDWKTVTKVFSGYPIICD VVDNQLGWEKKQPLELLQQYKYLMDVSHCVIFNSEENKSFFEKMGFLENLDARVIPNW YTLPLDYQPKNRNFDKEKEVIDIVYSGNMNDRFDWDTVSRIPKEIDRPIRVHLIGNCQ RALDKMSLVLDDPAIIYHGPMRERDLLEFMEGCDLAIMPHIHDEHSSFMNPMKIHMYN KVGFPCVSSAVAGVDLDSNLIFKASSSDDFIHALRNVLNGEVDISIKNDTHNESSYLS MILR" misc_feature 1701766..>1702416 /locus_tag="B565_1530" /note="Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate...; Region: Glycosyltransferase_GTB_type; cl10013" /db_xref="CDD:186885" misc_feature 1702297..>1702542 /locus_tag="B565_1530" /note="Glycosyl transferases group 1; Region: Glycos_transf_1; cl12012" /db_xref="CDD:196297" misc_feature 1702882..1703928 /locus_tag="B565_1530" /note="Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate...; Region: Glycosyltransferase_GTB_type; cl10013" /db_xref="CDD:186885" gene 1704050..1705885 /locus_tag="B565_1531" /db_xref="GeneID:10487448" CDS 1704050..1705885 /locus_tag="B565_1531" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392183.1" /db_xref="GI:330829231" /db_xref="GeneID:10487448" /translation="MDFLISNKKLAFSHRDKFLKIRTDKGCKSYLYESFNGVDILLIG DTLVKPSEHEMFFWDGHYSLNGIYRHSLEKDTYPGHAEIFNIIKDVYSATGCFMVSHI DVSSCKITMSSDVLNQYPIYYYTDGTEYCISNKPSFIYEHVGLLKKTARSSIENVIFG APFNSTHIQGVKKLRLYEKIEISGSFFRIKTVNHAFKASSYDEAIHLASESINSHVQS IFQSLDDKDFVTDLTGGADSRAMLAFLLKEQPSSNIGIRCMGTYPNPDANVAAYIKDR FNLRSADFPIIGNSPEVILRNNAQLAGGGIQADLAVPAVKQSQIVHFNGFYGGIDGNV FDHYAHIIESGKKYSTDLHSRYIFERRYNSGIIDIVNCDYAESVVHDFKFYLDELVEL GVSESTLSHEVYLRNRSANHYGMSQFLKNMSSIVPCPFANHLLVEARKYLPPTLSSKR KVMFDLIGINFNDLLWLPMANRKWDQDIISLDQYKSWENQSEINFSSENLTSFCGELF NKIPVQVNNDILPFFTVSKSDSQQSHLIHHYKINFYQSVAKFFISELDSNNNLWEYWD RDKIWEICNKNPDRFRNDGLDVELLGIFNSSAIWLNNLEMTGQVE" gene 1705888..1707054 /locus_tag="B565_1532" /db_xref="GeneID:10487449" CDS 1705888..1707054 /locus_tag="B565_1532" /codon_start=1 /transl_table=11 /product="UDP-glucose/GDP-mannose dehydrogenase family" /protein_id="YP_004392184.1" /db_xref="GI:330829232" /db_xref="GeneID:10487449" /translation="MNITISGTGYVGLSNAVLLAQNHPVIALDVIAEKVEKINHRQSP IVDKELEEYLATKPLNLKATLDKYEAYKAAEFVIIATPTDYDPETNYFNTRSVEAVIR DVMSINPNAVMVIKSTIPVGFTERMREELGTENLIFSPEFLREGKALYDNLHPSRIVV GECSERAQRFADLLQEGAIKQDIPVLLTGSTEAEAIKLFANTYLAMRVAYFNELDTYA QSHGLDSRQIIEGIGLDPRIGSHYNNPSFGYGGYCLPKDTKQLLANYNKVPNNLIRAI VDANTTRKDFIADSIIRRNPKVVGIHRLVMKAGSDNFRSSAIQGIMKRIKAKGIEVVV FEPTIKEAHFFHSRVIRDLNEFKAISDVILCNRMSNELVDISDKVYTRDLFGSD" misc_feature 1705888..1707051 /locus_tag="B565_1532" /note="UDP-glucose 6-dehydrogenase; Provisional; Region: PRK15057" /db_xref="CDD:185017" misc_feature 1705888..>1706283 /locus_tag="B565_1532" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 1706458..1706736 /locus_tag="B565_1532" /note="UDP-glucose/GDP-mannose dehydrogenase family, central domain; Region: UDPG_MGDP_dh; pfam00984" /db_xref="CDD:144540" misc_feature 1706785..>1706979 /locus_tag="B565_1532" /note="UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; Region: UDPG_MGDP_dh_C; pfam03720" /db_xref="CDD:190725" gene 1707295..1708515 /locus_tag="B565_1533" /db_xref="GeneID:10487450" CDS 1707295..1708515 /locus_tag="B565_1533" /codon_start=1 /transl_table=11 /product="family 2 glycosyl transferase" /protein_id="YP_004392185.1" /db_xref="GI:330829233" /db_xref="GeneID:10487450" /translation="MIAICAIFKNEYPYILEWIAYHRCLGINHFYIADNISIDGSTEL LKALHELGVIRRTPYPTEPGIPPQIGAYNSLFNSAEEEWLAFIDADEFITPSNYEEGL NELHILLGDTNASAIALNWAVYGSSCSIIPENTLVTERLIKRAGKDHPVNRHYKSIVR KRDTLCAGKTPHDFILHDGKFYIKTTGAIEADSHGLSKTVDWIIARINHYVIKSRAEF ITKKSARGRATTIDSNLNRTLSFFRNHDLNQIEDVIPRWFIQKIKAEKKLIIEQLDSF GYSYTDVQYPTSLYRTAHGMGKGCIDFLAINNGAIEMRGWAIDRNNYPIKDVIAVVNS EIILKCTKLIFRDRIDLSESGLGSGIGAGFNVSMTRPGMDIKSIDFYGLDINGLAVVE LKGSVDPMTIMNAS" misc_feature 1707304..>1707621 /locus_tag="B565_1533" /note="Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Region: Glyco_tranf_GTA_type; cl11394" /db_xref="CDD:197438" gene 1708738..1710768 /locus_tag="B565_p005" /note="Glycosyl transferase" /pseudo /db_xref="GeneID:10487451" gene 1710828..1711853 /locus_tag="B565_1534" /db_xref="GeneID:10489950" CDS 1710828..1711853 /locus_tag="B565_1534" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392186.1" /db_xref="GI:330829234" /db_xref="GeneID:10489950" /translation="MDEIIRKKFFKPYLKLNKQSYGNQRAVTLDGHKLFILHEGKSPT LAYFESAITDRFPDARCQCVDILVSPEIPIPEGSALVIIRFISPKWQRHIERYIDRCS RIVYFMDDDLFDPMALSTLPKEYRTKIIRRSAAQHRWITQYCDDIWVSTAYLAKKYSH LNPEIVSAKPSPLLLEKRKPVRMAYHGSSSHREEKYWLRQIVEGVLEACPSASFEIFG EHDIYKHYRDLPRVSVLHPMSWQNYLAYTKTHQLDIGLAPLLDSDFNLARGPVKFYDF VRMGAVGVYSNCAPYNDFIEQNINGILLENDPQRWVDAITLLINKEKKRVELANNAKM YAYSLAN" misc_feature <1711683..1711832 /locus_tag="B565_1534" /note="Glycosyl transferases group 1; Region: Glycos_transf_1; cl12012" /db_xref="CDD:196297" gene 1711880..1712809 /locus_tag="B565_1535" /db_xref="GeneID:10487452" CDS 1711880..1712809 /locus_tag="B565_1535" /codon_start=1 /transl_table=11 /product="UTP-glucose-1-phosphate uridylyltransferase, GalU protein" /protein_id="YP_004392187.1" /db_xref="GI:330829235" /db_xref="GeneID:10487452" /translation="MPNNNFLVRKAVIPVAGLGTRMLPATKAIPKEMLPIVDKPLIQY VVNECVAAGIKEIVLVTHSSKNAIENHFDTSFELEATLESRVKRKLLDEIQNICPKDV TIMHVRQGEAKGLGHAILCAYPVIGDEPFAVVLPDVILDEYTADQHTENLAAMLVRYK LTGQSQVMVEPVPLADTDKYGIADCNQVKLQPGQSAPITEVVEKPDIDEAPSNLAVVG RYVLSNNIWPLLKKTPPGAGNEIQLTDAIAMLIEQETVDAFHMTGLSHDCGNKAGYMK ANIAYGMRHHEIGQFVTDYINSLTSQKTEKASV" misc_feature 1711904..1712731 /locus_tag="B565_1535" /note="Prokaryotic UGPase catalyses the synthesis of UDP-glucose; Region: UGPase_prokaryotic; cd02541" /db_xref="CDD:133021" misc_feature order(1711919..1711930,1711970..1711975,1712204..1712206, 1712213..1712224,1712282..1712284,1712288..1712293, 1712417..1712422,1712486..1712491,1712525..1712527, 1712609..1712611) /locus_tag="B565_1535" /note="active site" /db_xref="CDD:133021" misc_feature order(1711931..1711933,1711940..1711954,1711958..1711966, 1711976..1711984,1711988..1711996,1712006..1712008, 1712078..1712080,1712084..1712092,1712096..1712098, 1712108..1712113,1712198..1712203,1712207..1712209, 1712213..1712215,1712414..1712416,1712597..1712599, 1712669..1712671,1712687..1712695,1712699..1712707, 1712711..1712719,1712726..1712731) /locus_tag="B565_1535" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:133021" gene 1712811..1713896 /locus_tag="B565_1536" /db_xref="GeneID:10487453" CDS 1712811..1713896 /locus_tag="B565_1536" /codon_start=1 /transl_table=11 /product="dTDP-glucose 4,6-dehydratase" /protein_id="YP_004392188.1" /db_xref="GI:330829236" /db_xref="GeneID:10487453" /translation="MKILVTGGAGFIGSAVVRHIIRDTQDAVINLDKLTYAGNLESLA DVSSSDRYAFEQVDICNRAELDRVFALHQPDAVMHLAAESHVDRSITGPADFIETNIV GTYMLLEAARAYWNGLDEARKAAFRFHHISTDEVYGDLPHPDEVAAGEPLPLFTETTP YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALDG KPLPVYGKGDQVRDWLYVEDHARALYKVVTTGLVGETYNIGGHNEKQNLEVVYTICDL LDEMVPKSGSYREQITYVADRPGHDRRYAIDATKMSAELAWQPQETFESGIRKTVQWY LDNQQWVSNVKSGAYQSWIEQNYGERA" misc_feature 1712811..1713866 /locus_tag="B565_1536" /note="dTDP-glucose 4,6 dehydratase; Provisional; Region: PRK10084" /db_xref="CDD:182230" misc_feature 1712811..1713824 /locus_tag="B565_1536" /note="dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs; Region: dTDP_GD_SDR_e; cd05246" /db_xref="CDD:187557" misc_feature order(1712829..1712831,1712835..1712846,1712904..1712915, 1712919..1712924,1712979..1712987,1713048..1713056, 1713060..1713062,1713105..1713107,1713201..1713209, 1713309..1713311,1713321..1713323,1713390..1713401) /locus_tag="B565_1536" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:187557" misc_feature order(1713060..1713068,1713207..1713215,1713309..1713311, 1713390..1713398,1713423..1713431,1713438..1713443, 1713474..1713482,1713495..1713497,1713501..1713503, 1713606..1713608,1713699..1713701,1713708..1713710, 1713720..1713722) /locus_tag="B565_1536" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187557" misc_feature order(1713072..1713074,1713078..1713080,1713087..1713092, 1713099..1713101,1713111..1713116,1713123..1713125, 1713135..1713137,1713144..1713146,1713225..1713227, 1713282..1713284,1713288..1713293,1713297..1713308, 1713315..1713317,1713324..1713329,1713336..1713341, 1713348..1713353,1713357..1713365,1713711..1713713) /locus_tag="B565_1536" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187557" misc_feature order(1713108..1713110,1713207..1713209,1713309..1713311, 1713321..1713323) /locus_tag="B565_1536" /note="active site" /db_xref="CDD:187557" gene 1713896..1714783 /locus_tag="B565_1537" /db_xref="GeneID:10487454" CDS 1713896..1714783 /locus_tag="B565_1537" /codon_start=1 /transl_table=11 /product="dTDP-4-dehydrorhamnose reductase subunit" /protein_id="YP_004392189.1" /db_xref="GI:330829237" /db_xref="GeneID:10487454" /translation="MHILLFGKNGQVGWELQRALAPLGRITAVDFDSSDYCGDFSNPA GVAETVRLVKPDVIVNAAAHTAVDKAESEREFAELLNATSVAAIAKEAEALGAWLVHY STDYVFDGRGERPWVETDATAPLNVYGETKLAGEQGASLCSRHLIFRTSWVYAARGAN FAKTMLRFGKERSEMSVINDQFGAPTGAELLADCTAHAIRVAQSKPEVAGLYHLIASG TTTWFDYAQLVFAKAREAGVELAVTQLNAVPTSAFPTPAKRPHNSRLDTGKFQRTFDL VLPEWTVGVERMLTEILGK" misc_feature 1713896..1714780 /locus_tag="B565_1537" /note="dTDP-4-dehydrorhamnose reductase; Provisional; Region: PRK09987" /db_xref="CDD:182184" misc_feature 1713902..1714738 /locus_tag="B565_1537" /note="dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs; Region: dTDP_HR_like_SDR_e; cd05254" /db_xref="CDD:187564" misc_feature order(1713914..1713916,1713920..1713931,1713983..1713988, 1714007..1714018,1714076..1714084,1714088..1714090, 1714133..1714135,1714199..1714207,1714277..1714279, 1714289..1714291,1714343..1714354) /locus_tag="B565_1537" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:187564" misc_feature order(1714136..1714138,1714205..1714207,1714277..1714279, 1714289..1714291) /locus_tag="B565_1537" /note="active site" /db_xref="CDD:187564" misc_feature order(1714205..1714207,1714277..1714279,1714349..1714351, 1714388..1714390,1714424..1714426,1714442..1714444) /locus_tag="B565_1537" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:187564" gene 1714896..1715774 /locus_tag="B565_1538" /db_xref="GeneID:10487455" CDS 1714896..1715774 /locus_tag="B565_1538" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate thymidylyltransferase 1" /protein_id="YP_004392190.1" /db_xref="GI:330829238" /db_xref="GeneID:10487455" /translation="MTKRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTL MLAGIRDILIISTPQDTPRFEQLLGDGSQWGLNLQYKVQPSPDGLAQAFILGEEFIGS DPCALVLGDNIFYGHDLQKQLEAAAAKESGATVFAYHVHDPERYGVVEFDKEGTAISL EEKPLEPKSNYAVTGLYFYDNSVVEIAKSLKPSPRGELEITDVNRIYLEQGNLSVAMM GRGYAWLDTGTHESLIEASNFIQTIETRQGLKVACPEEIAFRQKFISADQIRELAAPL AKNAYGQYLLRMVAKA" misc_feature 1714905..1715624 /locus_tag="B565_1538" /note="G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase; Region: G1P_TT_short; cd02538" /db_xref="CDD:133019" misc_feature 1714908..1715759 /locus_tag="B565_1538" /note="glucose-1-phosphate thymidylyltransferase, short form; Region: rmlA; TIGR01207" /db_xref="CDD:130274" misc_feature order(1714920..1714922,1714926..1714931,1715142..1715144, 1715151..1715162,1715226..1715228,1715334..1715336, 1715379..1715384,1715412..1715414,1715496..1715498) /locus_tag="B565_1538" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133019" misc_feature order(1714938..1714940,1714947..1714955,1714962..1714967, 1714977..1714985,1714989..1715000,1715007..1715009, 1715082..1715084,1715238..1715243,1715307..1715318, 1715328..1715333,1715565..1715573,1715583..1715588, 1715595..1715597,1715604..1715612,1715619..1715624) /locus_tag="B565_1538" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:133019" gene 1715839..1716390 /locus_tag="B565_1539" /db_xref="GeneID:10487456" CDS 1715839..1716390 /locus_tag="B565_1539" /codon_start=1 /transl_table=11 /product="dTDP-4-dehydrorhamnose 3,5-epimerase" /protein_id="YP_004392191.1" /db_xref="GI:330829239" /db_xref="GeneID:10487456" /translation="MNVIKTAIPDVLIFEPKVFGDERGFFFESFNHKLFEEAVGYQVN FVQDNHSKSSKGVLRGLHYQLPPNAQGKLVRCVAGEVFDVAVDIRKSSPTFGKWVGVH LSGENKRQLWIPEGFAHGFVTLTETAEFLYKTTNYYAPVSDRGIAWNDASIGIKWPEL NADILTSAKDSTAKSLETADLFI" misc_feature 1715845..1716375 /locus_tag="B565_1539" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene 1716521..1718539 /locus_tag="B565_1540" /db_xref="GeneID:10487457" CDS 1716521..1718539 /locus_tag="B565_1540" /codon_start=1 /transl_table=11 /product="capsule export protein KpsC" /protein_id="YP_004392192.1" /db_xref="GI:330829240" /db_xref="GeneID:10487457" /translation="MEGAVSFSENDVLVGWGQKANTNQIKQKAQALGLPYWQLEDGFI GYIGHPARGGKAVSLIADPVGIYYDARQPSQLEQLIATPCEPQMLARAERLIGELVRL GVTKYNCYATAHGQSIVSGSVTALSAVGDYGGLPSGLATRLQQSAKLRILLVDQVAGD LSIPGAMASEADFVAMVEAARRNHPDARLLLRTHPDTRFGKKSGVLARLNLDDVEIVA DHCHPHALLKVVDAVYTVSSQLGFEGLLLGKPVYCFGMPFYAGWGLTHDSKQCERRNV RVSLPQLVAAALICYPRYLDPVLGQRCEVEEVVAIIARQQKPAPRWRRLYLVGFSLWK RAFMQAFCHHLAEELCFVSKPPKRLTGDEQILVWGSRHPDLASAIRVEDGFIRSRGLG SNLCRPSSLSLDPVGIYFDSRTPSGLEQLLNYQRVTEVEVKRGDALIALLREHRVSKY NVGEPQHYAKPDDGRELVLVVGQVDGDASILTGSPHIRSNEQLLWAVRAAKPEAHILY KPHPDVVAGNRGGAISAACLAECVDSQVLDIGLTSLYPHVDELHTMTSLSGFEALVQG VKVTTWGQPFYSGWGLTTDANPPARRQRSLPLAALVYLTLVAYPLYIDWQTGLWISPE QLIHQLAKQGHSSAQKASRWQRWQVKLGYLFQTLMQRPAPLSFRFPRF" misc_feature 1716533..1718419 /locus_tag="B565_1540" /note="Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]; Region: KpsC; COG3563" /db_xref="CDD:33365" gene 1718552..1719886 /locus_tag="B565_1541" /db_xref="GeneID:10487458" CDS 1718552..1719886 /locus_tag="B565_1541" /codon_start=1 /transl_table=11 /product="capsule polysaccharide export protein KpsS" /protein_id="YP_004392193.1" /db_xref="GI:330829241" /db_xref="GeneID:10487458" /translation="MKILLLQGPLGPFFQALSRQLTEAGHQVVKIHFNGGDECWPCAG ENLRFCGKPESWNAFLRRVLKHHAIDSVICYGDCRYYHLVAGRICKLKKLPFWAMEEG YLRPDYVTLEQGGVNAFSPWYERRDQLAELDWPVPYDSSLKVGKTFAVRAWNASRYHI SKALMQWRYPHFVNHRPWNLVQEAMGWVCGAMVKYGNLRQDRALLKALPQYAGRIFFV PLQVTEDFQIREHSDLSGVEEMVAQVINSFAQHAKPEDVLLFKHHPMDRGYVSYRAQI NRLIAVLGLEGRVFYGYELPLPTLYPLLKGVITINSTVGLSALLHDVPTFCMGRALYD IDGLTTTGSLESFWHKQSPVCAETFKRVRHSLLHLTQLNASFYRHLNMSALAVMEKMK LSQQPLSGEAVSPERCMRVNKTMCLTLPWLATIDSISDPFTSVGSTVLMLLV" misc_feature 1718558..1719682 /locus_tag="B565_1541" /note="Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]; Region: KpsS; COG3562" /db_xref="CDD:33364" gene complement(1720698..1722362) /locus_tag="B565_1542" /db_xref="GeneID:10487459" CDS complement(1720698..1722362) /locus_tag="B565_1542" /codon_start=1 /transl_table=11 /product="asparagine synthetase B with glutamine amidotransferase type 2 domain-containing protein" /protein_id="YP_004392194.1" /db_xref="GI:330829242" /db_xref="GeneID:10487459" /translation="MCSIFGILDIKSDAVALRKSALEMSKRLRHRGPDWSGVYSSDKA ILVHERLAIVDPGNGAQPLYNPERTHVLAVNGEIYNHKELEKTLKVDFQFQTKSDCEV LLALYKEKGPAFLDDLNGIFAFILYDAEQDAYLIGRDHMGIIPLYTGRDEHGNFYVAS EMKALVPVCKSVETFPPGHYLWSKDGELKQWYKRDWMEYAAVEHNVSDKAELKAALEA AVKRQLMCDVPYGVLLSGGLDSSVISAITKLYAARRIEDDGKSEAWWPQLHSFAVGLE GSPDLAAARKVADHLGTIHHQIHFTVQEGLDALRDVIYHLETYDVTTIRASTPMYLMA RYIKAMGIKMVLSGEGSDELFGGYLYFHKAPNAREFHEENVRKLASLHLYDCLRANKS MAAWGVEGRVPFLDKEFMDVAMRLQPADKMCGKGKIEKHILREAFEDLLPHEVAWRQK EQFSDGVGYSWIDSLKAMVEQEVTDQMFEAAAFRFPINTPLTKEAYFYRAIFDEHFPL EAAARTVPYGKSVACSTPTALEWDAKFKEMADPSGRAVMDVHQQGY" misc_feature complement(1720701..1722362) /locus_tag="B565_1542" /note="asparagine synthetase B; Provisional; Region: asnB; PRK09431" /db_xref="CDD:181851" misc_feature complement(1721790..1722359) /locus_tag="B565_1542" /note="Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine synthetase B catalyses the ATP-dependent conversion of aspartate to asparagine. This enzyme is a homodimer, with each monomer composed of a glutaminase domain and a...; Region: AsnB; cd00712" /db_xref="CDD:48476" misc_feature complement(order(1722066..1722068,1722132..1722140, 1722213..1722215,1722357..1722359)) /locus_tag="B565_1542" /note="active site" /db_xref="CDD:48476" misc_feature complement(order(1722216..1722218,1722255..1722269, 1722276..1722278,1722285..1722287,1722309..1722311)) /locus_tag="B565_1542" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48476" misc_feature complement(1720995..1721705) /locus_tag="B565_1542" /note="The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes...; Region: Asn_Synthase_B_C; cd01991" /db_xref="CDD:30178" misc_feature complement(order(1721316..1721324,1721364..1721366, 1721544..1721552,1721658..1721666)) /locus_tag="B565_1542" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30178" misc_feature complement(order(1721316..1721324,1721364..1721366, 1721544..1721552,1721658..1721666)) /locus_tag="B565_1542" /note="Molecular Tunnel; other site" /db_xref="CDD:30178" gene complement(1722555..1722923) /locus_tag="B565_1543" /db_xref="GeneID:10487460" CDS complement(1722555..1722923) /locus_tag="B565_1543" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="YP_004392195.1" /db_xref="GI:330829243" /db_xref="GeneID:10487460" /translation="MKTLNDWILPGRHEAAPTPLMPAPERIKAGNPAQTVWNHYSDPS QQFHVGFWSCEPGRWAIHYTEHEYCQLLEGDVVIHDSLGGQLALKPGDQFVIPAGFVG EWETLTPCRKVYVIFEPASA" misc_feature complement(1722570..1722902) /locus_tag="B565_1543" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene complement(1723066..1724640) /locus_tag="B565_1544" /db_xref="GeneID:10487461" CDS complement(1723066..1724640) /locus_tag="B565_1544" /codon_start=1 /transl_table=11 /product="glutathione-regulated potassium-efflux system protein KefC" /protein_id="YP_004392196.1" /db_xref="GI:330829244" /db_xref="GeneID:10487461" /translation="MEPILIAVAFGCGMVVNLIGLPPLLGFLAAGFILNGMGYENTPA LSEVADLGVTLLLFTIGLKLNIKTLMRRDVWGTTSLHLLLSTLLFTVVLLVCKGLGLH LALSLDWKLALLLGFALSFSSTVFAVKVLEDRSDMNALYARIAIGVLVMQDVFAVAFL AFSSGKWPSIWALWVLGLPLLRPLLFKLLERAGHGELQVLFGVFLALVVGAAGFEVVG LKPDLGALIIGMLLASHPAAAGLAKALFNLKDLFLVCFFLTIGLNGLPTHDTMLLALA LVLALPLKSVLYYLVYSGAHLRVRTALLSTLALTNFSEFGLIVAAIAAKAGWLSHEWL VAVSLALAASFMISAPLNAQSERIYHRIGHWLRGLQASNLHPEDRPIELGDAEVIILG MGRIGQGAYFELENKYGNVILGVENDSEKLPTLRAQGMNVIEGDATDTDFWDKVLLSN QVNLVLLAMPHHSGNLYAIEKLRSHGFNGKIAAIVRFEDDIASLQEQGVDAVFNVYNE AGSGFARHVIRRLQPL" misc_feature complement(1723645..1724631) /locus_tag="B565_1544" /note="Sodium/hydrogen exchanger family; Region: Na_H_Exchanger; pfam00999" /db_xref="CDD:189798" misc_feature complement(1723510..1724502) /locus_tag="B565_1544" /note="Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]; Region: KefB; cl10482" /db_xref="CDD:164194" misc_feature complement(1723129..1723479) /locus_tag="B565_1544" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene complement(1724695..1725444) /locus_tag="B565_1545" /db_xref="GeneID:10487462" CDS complement(1724695..1725444) /locus_tag="B565_1545" /codon_start=1 /transl_table=11 /product="HAD-superfamily hydrolase" /protein_id="YP_004392197.1" /db_xref="GI:330829245" /db_xref="GeneID:10487462" /translation="MKKNVICDIDGVILHNNDLIPGADRFVHRLLEQGSKLLFLTNYP AQTQKDLQNRFRSAGIEVPEECFYTSAMGTADFLKRQDGKKAYVIGEGALTHELYKAG FTITDIDPDFVVVGETRNYNWTMMQQGAKFVDQGARFIATNPDTHGPMMHPACGALCA PIERMTGKKPFYVGKPSAWIIRAALNRMEAHSDDTIIIGDNLRTDILAGFQAGLETVL VLSGVSKVADIDRMPFRPNHIFDSVVDIDIV" misc_feature complement(1724698..1725438) /locus_tag="B565_1545" /note="UMP phosphatase; Provisional; Region: PRK10444" /db_xref="CDD:182466" misc_feature complement(1725100..1725432) /locus_tag="B565_1545" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature complement(order(1725319..1725324,1725415..1725423)) /locus_tag="B565_1545" /note="active site" /db_xref="CDD:119389" misc_feature complement(1725406..1725423) /locus_tag="B565_1545" /note="motif I; other site" /db_xref="CDD:119389" misc_feature complement(1725322..1725324) /locus_tag="B565_1545" /note="motif II; other site" /db_xref="CDD:119389" misc_feature complement(1724788..>1724946) /locus_tag="B565_1545" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" gene 1725642..1726706 /locus_tag="B565_1546" /db_xref="GeneID:10487463" CDS 1725642..1726706 /locus_tag="B565_1546" /codon_start=1 /transl_table=11 /product="adenosine deaminase" /protein_id="YP_004392198.1" /db_xref="GI:330829246" /db_xref="GeneID:10487463" /translation="MDTPIPKPVTPEHLTAAQFIAGLPKLELHLHIEGSLEPELMFEL GRRNNIPLPWHDVASVRAAYDFDCLQSFLDLYYRGASVLVTEQDFFDLTWAYLERCAA DKVVHVEIFFDPQTHTARGIPFATVLGGIERALQSGEKEFGISWRLIMSFLRHLSEED AFATLEEAMPFLSRIHGIGLDSGEKGNPPTKFARVFAKCRELGLQVVAHAGEEGPADY IWQAINELQVCRIDHGVRSADDPELLRYLAHTRLPLTVCPLSNTRLKVFGNIAQHNVL RLLEQGLCVTINSDDPAYFGGYMNANFAALADGLGATMSQLCRLSLNAVEASWLSLAD KARLTREIRSYAETHGVILH" misc_feature 1725705..1726667 /locus_tag="B565_1546" /note="Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in...; Region: ADA; cd01320" /db_xref="CDD:30063" misc_feature order(1725726..1725728,1725732..1725734,1726266..1726268, 1726275..1726277,1726338..1726340,1726509..1726514) /locus_tag="B565_1546" /note="active site" /db_xref="CDD:30063" misc_feature order(1725732..1725734,1725738..1725740,1726185..1726187, 1726275..1726277,1726509..1726514) /locus_tag="B565_1546" /note="purine riboside binding site [chemical binding]; other site" /db_xref="CDD:30063" gene complement(1726818..1727804) /locus_tag="B565_1547" /db_xref="GeneID:10487464" CDS complement(1726818..1727804) /locus_tag="B565_1547" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase GroES-like protein" /protein_id="YP_004392199.1" /db_xref="GI:330829247" /db_xref="GeneID:10487464" /translation="MNHTQAWCWHAPGEPTQLTLADLPLAPLAPDEVLVANRVIAFNP VDWKLIEYGHSNWQDGQVPGVDGMGTIVALGANVSHLRLGARVAYHTDLRHHGSFARH TRVPARALLPVPDALSDEAAAALPCPGLTAWQALAKLPRLHGEALLITGAGSSVGRFA VQLALQQGARVFASASPRHHPWLKQIGVQGVADYRDPDWLATLQTANGNEPFEGIIDL VSSQQAESLLPALGYYGHMVTVLGRIPHNPLPAFSHCHSLHEIALGAQHAFGSDKQWS RLVAAGVAMMEQMASGELTLPPLVVGDFEALPTLLERFKREGQGEKFLVRVA" misc_feature complement(1726824..1727792) /locus_tag="B565_1547" /note="Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family; Region: MDR5; cd08271" /db_xref="CDD:176232" misc_feature complement(order(1727016..1727024,1727082..1727087, 1727142..1727144,1727148..1727153,1727223..1727225, 1727268..1727270,1727277..1727282,1727334..1727339, 1727343..1727354,1727412..1727414,1727424..1727426, 1727661..1727663,1727670..1727678)) /locus_tag="B565_1547" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176232" misc_feature complement(order(1727013..1727021,1727079..1727081, 1727424..1727426,1727526..1727528,1727535..1727537, 1727670..1727672)) /locus_tag="B565_1547" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:176232" gene complement(1727952..1729073) /locus_tag="B565_1548" /db_xref="GeneID:10487465" CDS complement(1727952..1729073) /locus_tag="B565_1548" /codon_start=1 /transl_table=11 /product="oxidoreductase, FMN-binding protein" /protein_id="YP_004392200.1" /db_xref="GI:330829248" /db_xref="GeneID:10487465" /translation="MSHDHLFCPLRLGQLHLANRIVMPPMTRSRASQPGDVANAMMAN YYAQRAEAGLIISEGTQIDPMGKGYAWTPGIYSAEQIAGWKGVTDAVHAKGGTIFAQL WHVGRVTHPDNIGGAQPISASALPAVGVKVFVDNGSDAPGFVETVTPRAMTQADIDAV VSQFRQAARNAISAGFDGIELHAANGYLINQFLDSESNARTDSYGGSLENRLRFLKEV TEAVSSEIGAERVGVRLAPLTTLNGTVDANPQETYLAAARLLGQLNVVYLHIAEADWD DAPLMPENFKQGLRDAFPNTLIYAGKYDGERARAALEAGWADMIGFGRPFVANPDLPN RLRHGYPLAPHDPATLFGGGEKGLTDYPVYQADDAATSR" misc_feature complement(1727985..1729073) /locus_tag="B565_1548" /note="NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]; Region: NemA; COG1902" /db_xref="CDD:32086" misc_feature complement(1728033..1729061) /locus_tag="B565_1548" /note="Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a...; Region: OYE_like_FMN; cd02933" /db_xref="CDD:73381" misc_feature complement(order(1728099..1728107,1728111..1728113, 1728171..1728173,1728372..1728374,1728771..1728773, 1728897..1728899,1728993..1728995,1728999..1729001)) /locus_tag="B565_1548" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73381" misc_feature complement(order(1728102..1728107,1728111..1728113, 1728171..1728173,1728351..1728353,1728372..1728374, 1728513..1728515,1728519..1728521,1728528..1728530, 1728744..1728746,1728765..1728767,1728771..1728773, 1728897..1728899,1728993..1728995,1728999..1729001)) /locus_tag="B565_1548" /note="active site" /db_xref="CDD:73381" misc_feature complement(order(1728102..1728104,1728513..1728515, 1728519..1728521,1728528..1728530,1728765..1728767, 1728993..1728995)) /locus_tag="B565_1548" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73381" misc_feature complement(1728513..1728515) /locus_tag="B565_1548" /note="catalytic residue [active]" /db_xref="CDD:73381" gene complement(1729270..1730805) /locus_tag="B565_1549" /db_xref="GeneID:10487466" CDS complement(1729270..1730805) /locus_tag="B565_1549" /codon_start=1 /transl_table=11 /product="inner membrane protein YoaE" /protein_id="YP_004392201.1" /db_xref="GI:330829249" /db_xref="GeneID:10487466" /translation="MELLLDPHIWIGLFTLIILEIVLGIDNLVFIAILVKKLPPAQRD KARVIGLSLALLMRLGLLSVMSWLVTLTTPILHLWDHPFSGRDLILMGGGLFLLFKAT SELHERLEAKPQDDGPVGAYASFGVVIAQILVLDAVFSLDSIITAVGMVEHLGVMMAA VTIAMVVMVLASKPLTRFVNAHPTVVVLCLSFLLMIGFSLVAEGFGFHIPKGYLYAAI GFSVLIEFFNQLAQRSAMRHESKQPLRERTTAAIFKLMGSKAYQDQPDDDLDTPAVAP VSFGEEERYMVTGVLSLAERSIRTIMTPRSEMAWIDINDSSDEIRALLQREPHSLFPI CDGDLDEVIGVVKARDLLFALNEGQSLSELAKQNDPIIVPQTINVIRLLAELRKAKGS LILVSDEFGVIQGLVTTHDLLEAIVGELPDEDETPDIVRDGEGWLINGSTNIHHVEQV LEHEGLVSESDEYVTLAGMLLSHFGTLPTPGQQLQLQQLNFEVIEVSERRIERVKVMP AAA" misc_feature complement(1730077..1730805) /locus_tag="B565_1549" /note="Integral membrane protein TerC family; Region: TerC; cl10468" /db_xref="CDD:189213" misc_feature complement(1729384..>1730079) /locus_tag="B565_1549" /note="Hemolysins and related proteins containing CBS domains [General function prediction only]; Region: TlyC; COG1253" /db_xref="CDD:31445" misc_feature complement(1729561..1729890) /locus_tag="B565_1549" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the CorC_HlyC domain. CorC_HlyC is a transporter associated domain. This small domain is found in Na+/H+ antiporters, in proteins involved in...; Region: CBS_pair_CorC_HlyC_assoc; cd04590" /db_xref="CDD:73090" gene complement(1731108..1732034) /locus_tag="B565_1550" /db_xref="GeneID:10487467" CDS complement(1731108..1732034) /locus_tag="B565_1550" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392202.1" /db_xref="GI:330829250" /db_xref="GeneID:10487467" /translation="MAHHSHVISTLVTTEKQALTLSLFGCITFAIFGIGYGLFVGSNA IMLDGIFTLFSMGMTGLGLVTAYLVTRPSDARFQYGYAHFEPITNVINGAIILLLCLG ALYSGITTLLDGGREIDLGHALIYAAVSTFFCAIIYRIEAQVAEQVDSELVRVDSKEW LVDTLLSATLLIGFVVAIGLDAIGYGQYNRYIDPVLVSLLALCATLIPIKVLGRNLRE VLKIAPKGDVPRQVEQEIEALRQRHGIECYSHLAKSGRRFDLELNILVAPGQEWPVER QDALRQELWSRLGDTLGDAWLSVCFTREKRWL" misc_feature complement(1731111..1731995) /locus_tag="B565_1550" /note="Cation efflux family; Region: Cation_efflux; cl00316" /db_xref="CDD:193765" gene 1732202..1735273 /locus_tag="B565_1551" /db_xref="GeneID:10487468" CDS 1732202..1735273 /locus_tag="B565_1551" /codon_start=1 /transl_table=11 /product="D-lactate dehydrogenase" /protein_id="YP_004392203.1" /db_xref="GI:330829251" /db_xref="GeneID:10487468" /translation="MIPRLDYQDSLSPATLQFLELLERSAFRGDIEKSYASRLAMATD NSVYQVVPQAVLYPRSADDIAAMLKLAAEPAFASLSFFPRGGGTGTNGQSLGGGIIVD LSRYMNQIMEINLEEGWVRAQAGVVKDQLNAYLKPHGYFFSPDLSTSNRATLGGMINT DASGQGSLVYGKTSDHVLGLKAVLENGDLMATEPLTGERLADKLALESREGEIYRTLY RIGKERRAYIEATFPKLNRFLTGYDLKHLYQPDSDTLDVSRVLCGSEGSLGFITEARL NITPIPRYRTLVNVKYDSFPSALRNAPFMVQAQALSVETVDSRVLGLARADIIWHSVK DLIQDVPGKDLQGLNIVEFADTDEAEHKAKVAELCRRIDELLAKGEAGIIGYQVCDHL PSIETIYTMRKKSVGLLGNAEGRKKPVAFTEDTAVPPESLADFIMEFRALLDAHGLDY GMFGHVDAGVLHVRPALDLCDPEQEEVLRRISDQVVALTAKYGGLMWGEHGKGFRSEY SPAFFGELWEELQRVKGAFDPANRINPGKICIPYGSGAELVSVDGPKRGKYDRQIPLA VRTSYTRAMDCNGNGLCFTFETDSPMCPSVKISRDRRHSPKGRAGLMREWLRQLAEQG FDPLAEEVALQSGGVRFKQLVDKVRNSWAKQRGEYDFSHEVMEAMAGCLACKACTSQC PIKVDVPDFRARFMQLYHGRYLRAPKDYFVGTVESYAPLLAKAPKLVNFFLEKEWAQK ATEKSIGMVDVPLLSVPTLAESLHDNRARYFDLPGLERMSAEQRKQVVLIVQDPFTSY YDAPVVRDLVKLASKLGFQPYLLPFKPNGKPQHIKGFLRAFARTAANSAQFLNKVAAL GIPMVGVDPAMVLCYRDEYAKVLGSARGDFQVLLPQEWLLSLPADQLPARTDKTKSGE GCEPWYLFAHCTEKTAKPSTHGDWSTLFGRFGASLQPVSVGCCGMAGTYGHDVKQVEN SKGIYGLSWADPLARLPKARCLATGYSCRSQVKRMEGEKLKHPLQALLELL" misc_feature 1732301..1733827 /locus_tag="B565_1551" /note="FAD/FMN-containing dehydrogenases [Energy production and conversion]; Region: GlcD; COG0277" /db_xref="CDD:30625" misc_feature 1732355..1732768 /locus_tag="B565_1551" /note="FAD binding domain; Region: FAD_binding_4; pfam01565" /db_xref="CDD:190040" misc_feature 1733921..1735270 /locus_tag="B565_1551" /note="Fe-S oxidoreductase [Energy production and conversion]; Region: GlpC; COG0247" /db_xref="CDD:30596" gene 1735273..1735761 /locus_tag="B565_1552" /db_xref="GeneID:10487469" CDS 1735273..1735761 /locus_tag="B565_1552" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392204.1" /db_xref="GI:330829252" /db_xref="GeneID:10487469" /translation="MLTFPKRFRVPKAYRHPRFLLLPATPAQAVVEFVAMLREREQLH QLFRPHDIWPSANFSLSQHEGDLEWQQSEFLAKRSFAYGLWSPDREPQFWGGVYLYPS VLPEVAVELFFWKVAEAPITDEELEIQLREWLARVWQWPDPRLPGREVPWSEWPGVTY PW" gene 1735930..1736391 /locus_tag="B565_1553" /db_xref="GeneID:10487470" CDS 1735930..1736391 /locus_tag="B565_1553" /codon_start=1 /transl_table=11 /product="esterase YdiI" /protein_id="YP_004392205.1" /db_xref="GI:330829253" /db_xref="GeneID:10487470" /translation="MSHDIAPIWRKPMSLEGLNATSRNTLMAHLDIVYTAFGADWLEA TMPVDHRTHQPLGMLHGGASVVLAETLGSIAANMAVGPDSYCVGLEVNANHLRAKREG VVTGRCTPLHLGATTQVWQIEIRDERERLLCTSRLTMAVLKHKRGKDSSEE" misc_feature 1736014..1736352 /locus_tag="B565_1553" /note="PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not...; Region: PaaI_thioesterase; cd03443" /db_xref="CDD:48038" misc_feature order(1736104..1736106,1736191..1736193,1736212..1736223) /locus_tag="B565_1553" /note="CoenzymeA binding site [chemical binding]; other site" /db_xref="CDD:48038" misc_feature order(1736107..1736109,1736113..1736115,1736122..1736124, 1736194..1736208,1736212..1736214) /locus_tag="B565_1553" /note="subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:48038" misc_feature order(1736110..1736112,1736134..1736139,1736146..1736151, 1736191..1736193) /locus_tag="B565_1553" /note="PHB binding site; other site" /db_xref="CDD:48038" gene 1736572..1738473 /locus_tag="B565_1554" /db_xref="GeneID:10487471" CDS 1736572..1738473 /locus_tag="B565_1554" /codon_start=1 /transl_table=11 /product="DEAD/DEAH box helicase domain-containing protein" /protein_id="YP_004392206.1" /db_xref="GI:330829254" /db_xref="GeneID:10487471" /translation="MSDTEQLPLFSELGLAAPVLKALQDVGYERPSPIQAAAIPHLMA GHDLLGQAQTGTGKTAAFALPLLSRLEAGNRNTQILVLAPTRELALQVAEACQRYAHH MPDFHVLPIYGGASYETQTRALRRGAQVVVGTPGRVMDLIRRKNLDLSGLKALVLDEA DEMLRMGFIDDVDWIMEQCPSTRQVALFSATMPEQIRRVAQKHLKQPKEIKIASKTAT ATTIRQRYWQVTGLHKLDAMTRLLEVESYEALLVFVRTKNAAEELAGKLAARGHACEA LHGDIPQKLRERTVDKLRQGQLDILIATDVVARGLDVERITHVVNYDIPYDTESYVHR IGRTGRAGRKGEAILFVAPRERRMLRAIEHATRQAIEPMKMPSTEDINQHRLAKFKER IRETMMGEELEIYHNLVNELIEEDSADPLELAAALAKLVQGDQPLLLDDSIPDPLLNA GNDRGGFERRDFNDRGGRDFGDRGDRPARRMPSLEPRPLKDNPDVEMERYRVDVGAHH GVKPGQIVGAIANEANIESRFIGNIDIADDFSTVDLPKGMTADVLEVIKKARVCQRPL QITRYTEVPAGGNTSSRPPRGDRPFRGDRPFNKDRRPQGDRPFNKSGERREGGFNKDR KFGGKRRES" misc_feature 1736572..1738470 /locus_tag="B565_1554" /note="ATP-dependent RNA helicase DeaD; Provisional; Region: PRK11634" /db_xref="CDD:183247" misc_feature 1736599..1737192 /locus_tag="B565_1554" /note="DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (...; Region: DEADc; cd00268" /db_xref="CDD:28928" misc_feature 1736734..1736748 /locus_tag="B565_1554" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28928" misc_feature 1737043..1737054 /locus_tag="B565_1554" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:28928" misc_feature 1737136..1737144 /locus_tag="B565_1554" /note="motif III; other site" /db_xref="CDD:28928" misc_feature 1737241..1737621 /locus_tag="B565_1554" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(1737334..1737345,1737403..1737408,1737481..1737489) /locus_tag="B565_1554" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(1737505..1737507,1737568..1737570,1737580..1737582, 1737589..1737591) /locus_tag="B565_1554" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature 1738063..1738281 /locus_tag="B565_1554" /note="DbpA RNA binding domain; Region: DbpA; pfam03880" /db_xref="CDD:146487" gene complement(1738964..1740286) /locus_tag="B565_1555" /db_xref="GeneID:10487472" CDS complement(1738964..1740286) /locus_tag="B565_1555" /codon_start=1 /transl_table=11 /product="Na+/H+ antiporter NhaC-like protein" /protein_id="YP_004392207.1" /db_xref="GI:330829255" /db_xref="GeneID:10487472" /translation="MNPVVIAVGLMLVLSLLRINVVVSLALGAIAGGLVGGLSLTDTL TTFSGGLGGGAEIALSYAMLGAFAVAISRSGITDLLARKVINQLGKDASSTRIMWVKT LLLSSVLAVAISSQNLIPVHIAFIPILIPPLLHVMAQMQIDRRQVACVITFGLTATYM VLPVGFGGIFLNNILAKNLIDNGVPITTSQIPLAMALPVAGMVLGLLIAVFISYRKPR QYDLAKILDAEPEAVELNLTHIWVALLAIGVALGLQLMTNSIVLGALAGFVIFTCGGV IKFRESQDAFTQGVRMMSLIGFIMISAAGFAAVMKATHGVDSLVQVVASGIGQHKGIA AFLMLLVGLLITMGIGSSFSTVPIIATIYVPLCLQLGFSPMAIIALVGTAGALGDAGS PASDSTLGPTSGLNADGQHDHIWDSVVPTFIHYNIPLVIFGWIAAMVL" misc_feature complement(1738967..1740286) /locus_tag="B565_1555" /note="Predicted permease [General function prediction only]; Region: COG2056" /db_xref="CDD:32239" misc_feature complement(1738985..1739839) /locus_tag="B565_1555" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene complement(1740578..1741255) /locus_tag="B565_1556" /db_xref="GeneID:10487473" CDS complement(1740578..1741255) /locus_tag="B565_1556" /codon_start=1 /transl_table=11 /product="ribonuclease T" /protein_id="YP_004392208.1" /db_xref="GI:330829256" /db_xref="GeneID:10487473" /translation="MTDAVHTLKGRFRGFYPVVIDVETAGFNAKTDALLEIAAYTLKM DEQGWLVPDQVFHFHVEPFEGANLEKAALEFTGIDPYNPLRGAVSEKEALTEIFKGIR KGMKEQDCGRAIIVAHNATFDHGFVMAAAERAGLKRNPFHPFATFDTAALSGLALGQT VLAKACQSARIPFDNKEAHSALYDTERTTELFCHIVNRWKSMGGWPPAHPDDDTTDAP ADDEGQE" misc_feature complement(1740641..1741240) /locus_tag="B565_1556" /note="DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]; Region: DnaQ; COG0847" /db_xref="CDD:31188" misc_feature complement(1740659..1741225) /locus_tag="B565_1556" /note="DEDDh 3'-5' exonuclease domain of RNase T; Region: RNaseT; cd06134" /db_xref="CDD:99837" misc_feature complement(order(1740659..1740661,1740779..1740784, 1740791..1740796,1740803..1740805,1740812..1740826, 1740893..1740895,1741217..1741219,1741223..1741225)) /locus_tag="B565_1556" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99837" misc_feature complement(order(1740704..1740706,1740719..1740721, 1740887..1740895,1740899..1740904,1741178..1741180, 1741184..1741195)) /locus_tag="B565_1556" /note="putative active site [active]" /db_xref="CDD:99837" misc_feature complement(order(1740704..1740706,1740719..1740721, 1740890..1740895,1740899..1740904,1741178..1741180, 1741184..1741195)) /locus_tag="B565_1556" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:99837" misc_feature complement(order(1740704..1740706,1740719..1740721, 1740887..1740889,1741187..1741189,1741193..1741195)) /locus_tag="B565_1556" /note="catalytic site [active]" /db_xref="CDD:99837" gene complement(1741355..1742041) /locus_tag="B565_1557" /db_xref="GeneID:10487474" CDS complement(1741355..1742041) /locus_tag="B565_1557" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphatase B" /protein_id="YP_004392209.1" /db_xref="GI:330829257" /db_xref="GeneID:10487474" /translation="MLGFTALLILPLLLLATLPWQPFLTGSLQSGWLWWSYALTRMVD LPGIGVSGALLLLLTRYKLRLEWASFIALGCALAALLASDWGLKSLIKHLTEEPRPYL LWLESLALIPAIKHFYASSVDVRSEQVHAASQLLALPEWLGHHWQAEVNYAFPSGHSI AAISLAQFFGLIWLARAPTGVWLLPLWALGIGLSRMVMGMHWPVDVLASALLGSLTAL IAARWWLHRY" misc_feature complement(1741424..>1741786) /locus_tag="B565_1557" /note="PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid...; Region: PAP2_like; cl00474" /db_xref="CDD:193835" gene 1742319..1743467 /locus_tag="B565_1558" /db_xref="GeneID:10487475" CDS 1742319..1743467 /locus_tag="B565_1558" /codon_start=1 /transl_table=11 /product="Erythronate-4-phosphate dehydrogenase" /protein_id="YP_004392210.1" /db_xref="GI:330829258" /db_xref="GeneID:10487475" /translation="MAVVTKESPMKIVVDENMPHAVELFAEFGEVIPLPGRQMQACDL LDADVLLVRSVTRVNGDLLATSPKLGFVGTATIGTDHVDKALLASRNIPFFSAPGCNK YSVGDYVLSALLVLAERYELDLSAMTLAVIGAGNTGECVAGKAQALGMRVLRCDPPKA RNTPDAGFVDYQTALGADIVSFHVPITREGLDATYHLLDAEQIAARPAGQILINASRG EVWDNRALLARQLSDKPLRLVMDVWENEPEPLAALVPHTEIATPHIAGYSLEGKARGT WMLYQALCQQLGRQPRQDLSQLLPAPDVQAVVPGRAPDQALIKQLVHLVYDVRRDDAR FRTRLGLPGSFDEQRKHYPERRELSSLQVEGAFADQALGELGFALSRP" misc_feature 1742346..1743455 /locus_tag="B565_1558" /note="erythronate-4-phosphate dehydrogenase; Validated; Region: PRK00257" /db_xref="CDD:166874" misc_feature 1742682..1743113 /locus_tag="B565_1558" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 1743210..1743446 /locus_tag="B565_1558" /note="Domain of unknown function (DUF3410); Region: DUF3410; pfam11890" /db_xref="CDD:192865" gene 1743616..1744677 /locus_tag="B565_1559" /db_xref="GeneID:10487476" CDS 1743616..1744677 /locus_tag="B565_1559" /codon_start=1 /transl_table=11 /product="aspartate-semialdehyde dehydrogenase" /protein_id="YP_004392211.1" /db_xref="GI:330829259" /db_xref="GeneID:10487476" /translation="MAPPGAIAALSEENRMSQQFNVAVLGASGAVGQAMIEILEEREF PVATLYPLASSRSAGDTVRFGGKNFDILDVEEFDWSQVQIALFSAGAEVSAKWAPIAA EHGCIVIDNTSCFRYDEDIPLVIPEVNPDALADFRNRNIIANPNCSTIQMLVALKPLH DEVGIARINVATYQSVSGSGKEGVSELAGQTAHLLNGRPVEPTLYPQQIAFNLIPQID SFTDNGYTREEMKMVWETQKILGDASIAVNPTCVRVPVFYGHAEAVHVELHQPLDAEQ VKDLLRNAPGVTLFDDEGDYPTPVRDATGKDEVLVGRVRQDISHPSGINMWIVADNVR KGAATNSVQIAELLVRDYL" misc_feature 1743673..1744662 /locus_tag="B565_1559" /note="aspartate-semialdehyde dehydrogenase; Provisional; Region: PRK14874" /db_xref="CDD:184874" misc_feature 1743676..1744020 /locus_tag="B565_1559" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 1744081..1744620 /locus_tag="B565_1559" /note="Semialdehyde dehydrogenase, dimerisation domain; Region: Semialdhyde_dhC; pfam02774" /db_xref="CDD:145758" gene 1744949..1747153 /locus_tag="B565_1560" /db_xref="GeneID:10487477" CDS 1744949..1747153 /locus_tag="B565_1560" /codon_start=1 /transl_table=11 /product="Motility protein FimV" /protein_id="YP_004392212.1" /db_xref="GI:330829260" /db_xref="GeneID:10487477" /translation="MGHSRITLATLLALGLLGTVQAEDSAREPFFVELKGPDEPAPPA VNSQPLAQPVARPAAQPVRTTAQPVVRQVTANAGSYGPVRPTDTLWSLASKYRPSNRV SVYQTMVAIYEKNPRSFADGNINHILVGSRILLPTAAEASVITDAQARAKFRSDNASW KGLSPKYLADKQAHTAKPAAAKPAKVEAAKTEPVKAAPAPLPVAKAAPIPAPVVAPQP AAETKEVAKVSEPAPKEAVAPAPSAAEGTTPAPLPSDLDKPVGKPATEMALALEDANA QLGQVTEMNHRLKLRLQSLTEEVETLKAQLQDQTALQKEIAELKAQPVPPVAAEPEPE KNWLMDLLSSPLNLAMIILLPVLLVLALVTLWLRARARRELEEQEKSLSESTAMMMDQ EQSEFDDLLSVDVTDNEPVRPVPDLNTPDGFMPMEPDEPAAKSDVDLVFSDEGEMELQ GFEPERMATQPASRDPDLVPDLDLSLDEPIALANEPAMDLASEFNPKPKAADEIMSEE ELQAALFAELDADLSADLEPDLSSIDEVGAADDDLASFDLGDFDSALDESATGKDDNA IDLSAAEDTDESADAMLAELGLEPVKAKEAELDLEWDPNELALSDFEDAFAEVESHPA DVQPREQAQESGYVEIDKLLAEADASTTEQEPYQGFSLDVGLDGFPEVLPESTGFDVD ADDGGVGAKLDLARAYLEIDDKDSARELLQEAAEQGSDHQRAEAEKLLKRLG" misc_feature 1745207..1745428 /locus_tag="B565_1560" /note="FimV N-terminal domain; Region: FimV_core; TIGR03505" /db_xref="CDD:132544" misc_feature 1747034..1747147 /locus_tag="B565_1560" /note="FimV C-terminal domain; Region: FimV_Cterm; TIGR03504" /db_xref="CDD:132543" gene 1747355..1748164 /locus_tag="B565_1561" /db_xref="GeneID:10487478" CDS 1747355..1748164 /locus_tag="B565_1561" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase A" /protein_id="YP_004392213.1" /db_xref="GI:330829261" /db_xref="GeneID:10487478" /translation="MRIALGIEYDGSRYFGWQRQREVISVQAELETALSRIANHPVSI QCAGRTDAGVHATGQVIHFDTEANRAEGAWTLGLNSNLPPDIAVRWVKQVDESFHARF SATARRYRYVIYNHNYRPAILGSGVSHYHETINAELMHQAGQSLLGEHDFSTFRAVAC QSNTPWRNVTHLCVSRQGPYIVLDIRANAFLHHMVRNITGSLLLVGQGLKPVEWIAEV LAAKDRNLAGPTAKAGGLYLVDVDYPAEFALPQLPLGPLWLPDSAPGTTSF" misc_feature 1747355..1748083 /locus_tag="B565_1561" /note="tRNA pseudouridine synthase A; Validated; Region: truA; PRK00021" /db_xref="CDD:178798" misc_feature 1747367..1748083 /locus_tag="B565_1561" /note="PseudoU_synth_EcTruA: Pseudouridine synthase, Escherichia coli TruA like. This group consists of eukaryotic and bacterial pseudouridine synthases similar to E. coli TruA, Pseudomonas aeruginosa truA and human pseudouridine synthase-like 1 (PUSL1)...; Region: PseudoU_synth_EcTruA; cd02570" /db_xref="CDD:30020" misc_feature order(1747376..1747378,1747589..1747591,1747598..1747621) /locus_tag="B565_1561" /note="dimerization interface 3.5A [polypeptide binding]; other site" /db_xref="CDD:30020" misc_feature order(1747496..1747507,1747940..1747942) /locus_tag="B565_1561" /note="active site" /db_xref="CDD:30020" gene 1748284..1749147 /locus_tag="B565_1562" /db_xref="GeneID:10487479" CDS 1748284..1749147 /locus_tag="B565_1562" /codon_start=1 /transl_table=11 /product="acetyl-coenzyme A carboxylase carboxyl transferase subunit beta" /protein_id="YP_004392214.1" /db_xref="GI:330829262" /db_xref="GeneID:10487479" /translation="MSWLEKILPKSKITAPRRHNIPEGVWTKCSACEQVLYRAELERN LEVCPKCDHHMRISARARLESFLDEQGRTEIGAELEPQDVLKFKDSKRYKDRLSAAQK ETAEKDALVVMKGILKGVPVVACSFEFSFMGGSMASVVGARFVRAVEECIKEGRGLVC FSASGGARMQEALFSLMQMAKTSAALDRLTKAGLPYISVLTDPTMGGVSASLAMLGDI NVGEPKALIGFAGPRVIEQTVREKLPEGFQRSEFLLEKGAIDIIIDRREMRNRLASLL AKMLNTHVIEE" misc_feature 1748284..1749144 /locus_tag="B565_1562" /note="acetyl-CoA carboxylase subunit beta; Validated; Region: PRK05654" /db_xref="CDD:180184" misc_feature 1748284..1749126 /locus_tag="B565_1562" /note="Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; Region: ACCA; cl00513" /db_xref="CDD:189112" gene 1749162..1750409 /locus_tag="B565_1563" /db_xref="GeneID:10487480" CDS 1749162..1750409 /locus_tag="B565_1563" /codon_start=1 /transl_table=11 /product="FolC bifunctional protein" /protein_id="YP_004392215.1" /db_xref="GI:330829263" /db_xref="GeneID:10487480" /translation="MQQSQSRSLVDWLSYLEQIHPVNIDMGLDRVGAVARRMGLTQLP FKVITVAGTNGKGSSCAMAASILMAAGYKVGVYSSPHLLRFTERVRVNGQELSDSDHC AAFAEVEAARGEIALTFFEFATLAGLWLFCRAAPDVLLLEVGLGGRLDATNVVESDVA MITSIALDHCDWLGDTREAVAVEKAGVYRAGKPAISGEPNPPATIASEAARLGANLRQ VGIDFRGDEHKSGWDYHGLNQWRDLPKPALPLMNAVTVLAALESLGLPLPESAIRDGL ANARLAGRMQQLQSAPLVIVDVAHNPHSAAYLAAQLRKMPCTGVRRAVVGMLKDKDMA GSLAELDGLIGEWYLASLTGPRAATATQLAAALGEGKGPAREFDDVSAAYQAALAASS PDDMVIVFGSFYTVADILAGVAV" misc_feature 1749183..1750394 /locus_tag="B565_1563" /note="bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional; Region: PRK10846" /db_xref="CDD:182774" misc_feature 1750008..>1750163 /locus_tag="B565_1563" /note="Mur ligase family, glutamate ligase domain; Region: Mur_ligase_C; pfam02875" /db_xref="CDD:190458" gene 1750484..1751284 /locus_tag="B565_1564" /db_xref="GeneID:10487481" CDS 1750484..1751284 /locus_tag="B565_1564" /codon_start=1 /transl_table=11 /product="protein DedD" /protein_id="YP_004392216.1" /db_xref="GI:330829264" /db_xref="GeneID:10487481" /translation="MASKFQNRLVGTVILVALVVIFLPDLLDGHKLAQKEEAFAKIPL RPELEPAKPALQVSAASSLPADHLASQQQASAAQQWQVEEVADPMTLAGQGNGAQPAT TPAAPAPVQPQQNAQPKPQPKPEVVAKKPVEPPKPAPKPTPAKPVEVAKAPAPAKPQA GQIKSLDDLIESKMTQPTTPAPAAAPAQGSWILQLGAFKNVDSVNALVSKLRAAGYSA HTSPRTPVQGQLNRVFIGPDVSKAKLQGMQGRISQMTGLSGSVVSYNP" misc_feature 1750484..>1750621 /locus_tag="B565_1564" /note="cell division protein DedD; Provisional; Region: PRK11633" /db_xref="CDD:183246" misc_feature 1751048..1751269 /locus_tag="B565_1564" /note="Sporulation related domain; Region: SPOR; cl10051" /db_xref="CDD:186898" gene 1751456..1751773 /locus_tag="B565_1565" /db_xref="GeneID:10487482" CDS 1751456..1751773 /locus_tag="B565_1565" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392217.1" /db_xref="GI:330829265" /db_xref="GeneID:10487482" /translation="MILSTTPTLEGKAIREYRGIVVGEAILGANIFKDLFAGIRDIIG GRSGAYEKELARAREIAFDELKERAAALGANAVVGIDIDYEVVGQNGSMLMVSISGTA VVV" misc_feature 1751456..1751770 /locus_tag="B565_1565" /note="Domain of unknown function (DUF74); Region: DUF74; cl00426" /db_xref="CDD:193812" gene 1751846..1752013 /locus_tag="B565_1566" /db_xref="GeneID:10487483" CDS 1751846..1752013 /locus_tag="B565_1566" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392218.1" /db_xref="GI:330829266" /db_xref="GeneID:10487483" /translation="MAAGGVVTQSIDFKYLYLLIIPLTGFIFFNWVAREGQARVPPSG TTPLTDEVLFS" gene 1752026..1752628 /locus_tag="B565_1567" /db_xref="GeneID:10487484" CDS 1752026..1752628 /locus_tag="B565_1567" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392219.1" /db_xref="GI:330829267" /db_xref="GeneID:10487484" /translation="MNQKPALLTLVMLAMTAHAGSALAALPNFSATCPTDIRVKSQGG NVFINGKKATLKTLAPAAYSATNGKVVIGITFDLPASEPTLDYVIKHDRRAHGFCTVH AWSAGKAAALPMAKGDSPYQGKWIAKNSETGATVANIQVDGKEQVWVNGVKVKAKRAD GALQFRQGTILYTLQGDPRIRDESDWNDSDVQNTGPIRLE" gene complement(1752729..1754120) /locus_tag="B565_1568" /db_xref="GeneID:10487485" CDS complement(1752729..1754120) /locus_tag="B565_1568" /codon_start=1 /transl_table=11 /product="Sirohydrochlorin ferrochelatase" /protein_id="YP_004392220.1" /db_xref="GI:330829268" /db_xref="GeneID:10487485" /translation="MDFLPLFCQLQNKPVLIVGGGEVAVRKARLLLDAKAKITINAPH LEPQLMSWAEQGRLTVCAADFHPELLDGKWLVIAATNQPEVNHQVFHEANLRQIFCNV VDSPAHCSAIMPAIIDRSPLMVAISSAGAAPVLSRQLREKLEALLPQHLGQLAALAGK LREQVKLIPDKLARRRFWERLFSHERLACQLARGQQQAAEQSVAELLDEQPQSKGSVT LVGAGPGDAGLLTLSGLQQLQQADVVVYDRLVSQAVLALVRRDAERIFVGKEAGRHCV PQQAINQLLLEQARLGKQVVRLKGGDPFIFGRGGEELETLAEAGIPFSVVPGITAASG CAAYSGIPLTHRDHAQRVQFITGHDKEGNIAQEWSALAAPRQTLVFYMGLAHAARIQD ALQTHGMPGHTPVALVEQGTQLSQRVVRGELQQLAELARQVKSPSLIIIGSVVTLADK LDWYGEANAIHGI" misc_feature complement(1752759..1754120) /locus_tag="B565_1568" /note="siroheme synthase; Provisional; Region: cysG; PRK10637" /db_xref="CDD:182606" misc_feature complement(1753656..1754108) /locus_tag="B565_1568" /note="precorrin-2 dehydrogenase; Validated; Region: PRK06719" /db_xref="CDD:180668" misc_feature complement(1753497..1753676) /locus_tag="B565_1568" /note="Sirohaem synthase dimerisation region; Region: CysG_dimeriser; pfam10414" /db_xref="CDD:150995" misc_feature complement(1752750..1753478) /locus_tag="B565_1568" /note="Tetrapyrrole (Corrin/Porphyrin) Methylases; Region: TP_methylase; cl00304" /db_xref="CDD:197405" gene complement(1754318..1755328) /locus_tag="B565_1569" /db_xref="GeneID:10487486" CDS complement(1754318..1755328) /locus_tag="B565_1569" /codon_start=1 /transl_table=11 /product="anaerobic sulfite reductase subunit C" /protein_id="YP_004392221.1" /db_xref="GI:330829269" /db_xref="GeneID:10487486" /translation="MSLDIDIIKARAKNEYRLSKVRGEAMISVRIPGGIMPAHLLAVA QQIAEQYGNGLIHLTTRQKLAMPGIKYQDMDKVNAALEPFIKEIEVETCGIEVEDTTA GYQTIGGRNIVACQGNTICQKGNIDCTGLAQRMEKHLYPNPYHLKMVIAGCPNDCAKA NMADFGILGIAKIHFNAERCIGCGACVKACNHHAVDCLAIKHGKAVKEESKCIGCGEC VLACPTLAWQRDPKQLYMVKLGGRTSKKTPRTGKLFLNWVTEEVLHAVIKNLFEFEAE MLDGKPIYLHMGHLIDRAGYHKFKERVLRGVTLNPEAMVADRIFWAEDQYVANMHVKA VQ" misc_feature complement(1754366..1755319) /locus_tag="B565_1569" /note="sulfite reductase, subunit C; Region: sulfite_red_C; TIGR02912" /db_xref="CDD:131958" misc_feature complement(1755083..1755262) /locus_tag="B565_1569" /note="Nitrite/Sulfite reductase ferredoxin-like half domain; Region: NIR_SIR_ferr; pfam03460" /db_xref="CDD:190643" misc_feature complement(1754744..1754815) /locus_tag="B565_1569" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" misc_feature complement(1754651..1754716) /locus_tag="B565_1569" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" gene complement(1755340..1756179) /locus_tag="B565_1570" /db_xref="GeneID:10487487" CDS complement(1755340..1756179) /locus_tag="B565_1570" /codon_start=1 /transl_table=11 /product="anaerobic sulfite reductase subunit B" /protein_id="YP_004392222.1" /db_xref="GI:330829270" /db_xref="GeneID:10487487" /translation="MCQCQQTATAEPQQDVVENRLLPKAYTILAIERHTELEWNFRVS RDFDVHYGQFVEISLPTVGEAPISVSDYGDGYVDLLIRKVGKVTDALFALDVGDKLWM RGVHGNGYPLETYRNQHLIVVAGGTGVAPVKGLLRRFSKHPEEVKSLDMILGFKNEQA VLYRHEMPLWAEQQNLIVTLDEGKESEQFRIGRVTDYIDQLDLADKEDIQVIVVGPPI MIRFVVHAFLERGIPKDRIWVDYERRMACAVGKCGHCRMGDTYICVDGPVFRFDQAQH LID" misc_feature complement(1755343..1756131) /locus_tag="B565_1570" /note="anaerobic sulfite reductase subunit B; Provisional; Region: PRK08221" /db_xref="CDD:181300" misc_feature complement(1755367..1756098) /locus_tag="B565_1570" /note="Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases. Clostridium pasteurianum inducible dissimilatory type sulfite reductase is...; Region: sulfite_reductase_like; cd06221" /db_xref="CDD:99817" misc_feature complement(order(1755448..1755453,1755799..1755801, 1755916..1755924,1755934..1755942,1755976..1755987, 1755991..1755993)) /locus_tag="B565_1570" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99817" misc_feature complement(order(1755976..1755981,1755985..1755987)) /locus_tag="B565_1570" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99817" misc_feature complement(order(1755859..1755861,1755865..1755867, 1755889..1755891,1755907..1755909,1755916..1755918, 1755925..1755927)) /locus_tag="B565_1570" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99817" misc_feature complement(order(1755787..1755789,1755793..1755804, 1755814..1755816)) /locus_tag="B565_1570" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99817" misc_feature complement(order(1755532..1755537,1755712..1755720, 1755796..1755801)) /locus_tag="B565_1570" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99817" misc_feature complement(order(1755391..1755393,1755415..1755417, 1755424..1755426,1755439..1755441)) /locus_tag="B565_1570" /note="Iron coordination center [ion binding]; other site" /db_xref="CDD:99817" gene complement(1756181..1757239) /locus_tag="B565_1571" /db_xref="GeneID:10487488" CDS complement(1756181..1757239) /locus_tag="B565_1571" /codon_start=1 /transl_table=11 /product="anaerobic sulfite reductase subunit A" /protein_id="YP_004392223.1" /db_xref="GI:330829271" /db_xref="GeneID:10487488" /translation="MSFLLTHPALAQLFERLLPDYRIMAPAAEYRGGRFSDTDNVTYH SIRHPADLVWQEKSHFSPKEVVLPITQTLFHFDNLELRESKVEAKPTLLFLRSCDIHA LRRLDQVYLKNGQNSDVYYARLRSKLKLVLLECRESFENCFCVSMGSNKTQDYAAAIR LSDEGARIEVKDPELLGYFAELGESDDFTPEFVQSNPVKVRTPDSVCNDPQRIRQILT AHPVWAEYDSRCIGCGRCTTSCPTCSCYSVHDLTYAENPKQGERRRQWASCMVDGFSD MAGGHGFRAKHGERLRYRALHKVNDYKARQGEEHMCVGCGRCDDRCPHYISFSNIINK MTDVVEQTIAADNAQGAN" misc_feature complement(1756202..1757239) /locus_tag="B565_1571" /note="anaerobic sulfite reductase subunit A; Provisional; Region: PRK15055" /db_xref="CDD:185015" misc_feature complement(1756670..>1756921) /locus_tag="B565_1571" /note="putative encapsidation protein; Region: PHA01076" /db_xref="CDD:107017" gene complement(1757441..1758283) /locus_tag="B565_1572" /db_xref="GeneID:10487489" CDS complement(1757441..1758283) /locus_tag="B565_1572" /codon_start=1 /transl_table=11 /product="alpha-beta superfamily hydrolase" /protein_id="YP_004392224.1" /db_xref="GI:330829272" /db_xref="GeneID:10487489" /translation="MNKNASPSALVVEGGAMRGIFASGVLDAFIEHDYRPFDFAIGVS AGATNLLAYLASQHGRSHEILTKLACSQQFMDPLRFAKGGNLVDIHWLWNTSCRKYPL DIHAYRETGIPFYAVVTNTLTGKAEYIRVKPENMNEVLPASCAIPLASHEYPEVHGVP MTDGGVADSIPVIEAYRRGARHLTVILSEPLGYRLKPMPFPWMIRTLLKTRPALAQAL EQRDRSYNEALDFIANPPEDCQIEVIAPADYFPVSRFTRDINKLEMGYVMGKCAGYQA ALLN" misc_feature complement(1757465..1758259) /locus_tag="B565_1572" /note="Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]; Region: COG4667" /db_xref="CDD:34285" misc_feature complement(1757453..1758256) /locus_tag="B565_1572" /note="Hypothetical patatin similar to yjju protein of Escherichia coli; Region: Pat_hypo_Ecoli_yjju_like; cd07208" /db_xref="CDD:132847" misc_feature complement(order(1757795..1757797,1758152..1758154, 1758230..1758232,1758236..1758241)) /locus_tag="B565_1572" /note="active site" /db_xref="CDD:132847" misc_feature complement(1758146..1758160) /locus_tag="B565_1572" /note="nucleophile elbow; other site" /db_xref="CDD:132847" gene 1758549..1759565 /locus_tag="B565_1573" /db_xref="GeneID:10487490" CDS 1758549..1759565 /locus_tag="B565_1573" /codon_start=1 /transl_table=11 /product="peptidase U61 LD-carboxypeptidase A" /protein_id="YP_004392225.1" /db_xref="GI:330829273" /db_xref="GeneID:10487490" /translation="MTLLVPPLLRRGDTIAFFSPSSAATAWAPNRFARAKAFLEGQGF RLKAGSLTGQQDHWRSGSIAARAEELNALIRDPEVRCIISVIGGSNSNSLLPYLDFDA LKRDPKIIVGYSDVTALLLGIHAQTGLVTFYGPALVASFGELPPLVDETLASFLQIAL ADEAGVPCTLPTPAKWSDERLDWENQTRVKFCQPNRLISVGSGRVVGRLIGGNLNTMA GIWGSPYMPPIEHGDILLLEDSLKSAETVERSFAHLKLCGVFERIGALILGKHELFND QGSGKRPLDILLEVVGEPSFPILAEFDCAHTHPMLTLPLGIEVALDLDRQQLTLLEPW WRAE" misc_feature 1758585..1759511 /locus_tag="B565_1573" /note="Microcin C7 self-immunity protein determines resistance to exogenous microcin C7; Region: Peptidase_S66_mccF_like; cd07062" /db_xref="CDD:132883" misc_feature order(1758822..1758827,1759200..1759205,1759209..1759214, 1759281..1759286,1759290..1759295,1759302..1759307, 1759413..1759418) /locus_tag="B565_1573" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:132883" misc_feature order(1758888..1758890,1759260..1759262,1759464..1759466) /locus_tag="B565_1573" /note="catalytic triad [active]" /db_xref="CDD:132883" gene complement(1759630..1761885) /locus_tag="B565_1574" /db_xref="GeneID:10487491" CDS complement(1759630..1761885) /locus_tag="B565_1574" /codon_start=1 /transl_table=11 /product="sulfatase" /protein_id="YP_004392226.1" /db_xref="GI:330829274" /db_xref="GeneID:10487491" /translation="MNRPSSGRPRVLSLPSLLLALLGGLLLLTLLLPLNNPGSWLGRA QPLVLGPADNPLATLTRHALLYKSDSRGLYLVVRSQWQLRGPLQAGDKVRVELLNDKG ERIDQLSQAVDKRQVCRNNRCTLDLNSTLRAPDDALASRYQLRIGLLLKDRPESGDFS QILQTLPEQGFNLTYLVVSLTLVLALSAAVLKTVLPKLRRSLRWRIIGSLLLGNLTFV LLHGFVVFKLGEFLLWSGFRPEHYYLAWGSMVLGWSLCALAGFNLYMGLVFTALSGIG LLANFMKIAIYGVPLGGDDFGNLLALLRILLDQHPILPIFTVLLALFLCWRFALSRWV LRTAAATVAFFALCVFATQTGNKLLGANIRYVDRAVNYHRDIIRSGPGLYLFNLVDEM LQSGSVFRYPLQINELTPQLSYPPQGIAPRWDLVIVLQYESLWLDWKGRICAPAPTLS LPASVQQWQKTIHSPTTGGMTVLAEFEMNTGLPVGLLKQGVVPYYYLSQQVPGLAQSA RQSGYQTLFAHPYVEKFWGRAKAIPALGYEERWFDTRFTTLEHKGLYISDDALIDHIL KRSEQDDKPLFAYAVTMQGHGPFDGPRYQGQERSGACPNQSESDTQLLNTYYTGVVDA MASLERLLKTLDQSGKRYLVVAFGDHQPFLMSAGKGIHGDKPARDATYQIPMMAFTRA DDPLNLATQFAPVRQLYQMGQATRQLLAGDITPIEEKPLLHPVLGEEKGFDPSSLVPQ IRASFRPDALP" misc_feature complement(<1759918..1761270) /locus_tag="B565_1574" /note="Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]; Region: MdoB; COG1368" /db_xref="CDD:31559" misc_feature complement(<1759855..1760490) /locus_tag="B565_1574" /note="Sulfatase; Region: Sulfatase; cl10460" /db_xref="CDD:195965" gene 1762141..1763226 /locus_tag="B565_1575" /db_xref="GeneID:10487492" CDS 1762141..1763226 /locus_tag="B565_1575" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392227.1" /db_xref="GI:330829275" /db_xref="GeneID:10487492" /translation="MNPKVMARQARLLRMLESKEEIRIGRERDCPLPLAQLVKLKDSH PAVVKVYRHGLTAEVFHLKVEGHHWCLKRRRQDSLVANLDGKTAFLTELERRREIEAL RELHPTVLSHVVCTSFGSARAGVLVSPWLRGVPVHQLNERNLAQMLEVQGELARWGWF DWDPSPGNLLDDGEQICVFDFGYMWTFDPRFEYNSNGLVDPQFHVPERLETRTLSGLW LDEADPLPQFRYWRELCLKWVKREIHHLIREGASAPVLARLHALQGEWSAALASDEAL VANWWRDMYRSHRLDVADDLSGQSCGPLTLRRLDWLMQAVTDHYPLLVDNLSPQETEL GQTGLLARLQQLRREAVACQLPATSLA" misc_feature 1762297..1762719 /locus_tag="B565_1575" /note="Protein Kinases, catalytic domain; Region: PKc_like; cl09925" /db_xref="CDD:195926" misc_feature order(1762303..1762305,1762315..1762317,1762348..1762350, 1762354..1762356,1762471..1762473,1762522..1762533, 1762627..1762629,1762639..1762644,1762648..1762650, 1762675..1762680) /locus_tag="B565_1575" /note="active site" /db_xref="CDD:88612" misc_feature order(1762303..1762305,1762627..1762629) /locus_tag="B565_1575" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:88612" misc_feature order(1762315..1762317,1762348..1762350,1762354..1762356, 1762471..1762473,1762522..1762533,1762627..1762629, 1762639..1762644,1762648..1762650,1762675..1762680) /locus_tag="B565_1575" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:88612" gene complement(1763309..1764661) /locus_tag="B565_1576" /db_xref="GeneID:10487493" CDS complement(1763309..1764661) /locus_tag="B565_1576" /codon_start=1 /transl_table=11 /product="aspartokinase" /protein_id="YP_004392228.1" /db_xref="GI:330829276" /db_xref="GeneID:10487493" /translation="MSPINVAKFGGTSVANFPAMNHCADIVLANPATRVVVLSASAGV TNLLVALAQGELDEAGRDEQLAKLAGIQQAILTDLGNPVDVSALIHGQLDEIRLMAQQ AHQHTDAELADRLIACGELMSTRLFTELLRQRGVKAHWQDVRQLMRTDSRFGKATVDL ATTRTLCQQTLGPQLGDSLIITQGFIGADGDGRTTTLGRGGSDYSAALLAEALDAASI EIWTDVPGIYTTDPRLVTRARPIPEISFVEAAEMATFGAKVLHPATLQPAVRQNIPVF VGSAKDPAAGGTWIRASTDSSPLFRAVALRRQQVLVTLHSLNMFHAYGFLAEVFGILA RHRISVDLITTSEVSVSLTLDHTGSQSNGEPILSDKVLTELGQLCKVEVETGLALVAL IGNRMSEVNGVGSQVFDALREHNIRMICYGASAHNLCFLVKESEAGNIVNRLHQELLD " misc_feature complement(1763312..1764652) /locus_tag="B565_1576" /note="aspartate kinase III; Validated; Region: PRK09084" /db_xref="CDD:181643" misc_feature complement(1763789..1764652) /locus_tag="B565_1576" /note="Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that...; Region: AAK; cl00452" /db_xref="CDD:193824" misc_feature complement(order(1763978..1763983,1763990..1763995, 1764626..1764634,1764638..1764640)) /locus_tag="B565_1576" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:58599" misc_feature complement(order(1764053..1764061,1764539..1764547, 1764629..1764634,1764638..1764640)) /locus_tag="B565_1576" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:58599" misc_feature complement(1763510..1763737) /locus_tag="B565_1576" /note="ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII; Region: ACT_AKiii-LysC-EC_1; cd04932" /db_xref="CDD:153204" misc_feature complement(order(1763621..1763626,1763639..1763647, 1763684..1763689,1763696..1763698,1763705..1763707)) /locus_tag="B565_1576" /note="lysine allosteric regulatory site; other site" /db_xref="CDD:153204" misc_feature complement(order(1763591..1763593,1763597..1763599, 1763621..1763623,1763627..1763641,1763645..1763647, 1763651..1763653,1763672..1763674,1763681..1763686, 1763693..1763701)) /locus_tag="B565_1576" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:153204" misc_feature complement(1763312..1763503) /locus_tag="B565_1576" /note="ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII; Region: ACT_AKiii-LysC-EC_2; cd04917" /db_xref="CDD:153189" misc_feature complement(order(1763390..1763419,1763423..1763428, 1763438..1763440,1763447..1763461,1763465..1763470)) /locus_tag="B565_1576" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:153189" gene complement(1765083..1766411) /locus_tag="B565_1577" /db_xref="GeneID:10487494" CDS complement(1765083..1766411) /locus_tag="B565_1577" /codon_start=1 /transl_table=11 /product="amino-acid acetyltransferase" /protein_id="YP_004392229.1" /db_xref="GI:330829277" /db_xref="GeneID:10487494" /translation="MREREPSLVNAFRQSTPYVNVHRGATFVLMMGGEAICHPNFANI VSDIALLQTLGIRLVLVFGSRPQNDEALARAGIEAQYHKRIRVTDDESFTIIKQVCGG LQYDITAQLSMGLANTPMQGARISVVSGNFVTAQPLGVDDGIDFCHSGRVRRIDVEGI TRQLDQKSLVLISPIGCSVTGESFNLSSEEVARRVAVDLKADKLICFSSTQGVMDRRG EAISELFPEQAEELLVELEQAGEEMSGTARYLRAAIASCRGGVPRSHLVSYQDDGAML QELFSRDGLGTQIVRESAEQARAATIEDIGGILDLIRPLEEEGILVRRSREQLEMEID KFTIIERDGLIIGCAALYCFMEEAMAEMACVAIHPDYRNSNRGDQLVAKVAERAKRLG IRRLFVLTTRSIHWFRERGFDPLEVEDLPVARQRLYNWQRRSKVLSKTIA" misc_feature complement(1765089..1766411) /locus_tag="B565_1577" /note="N-acetylglutamate synthase; Validated; Region: PRK05279" /db_xref="CDD:179989" misc_feature complement(1765545..1766393) /locus_tag="B565_1577" /note="AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-...; Region: AAK_NAGS-ABP; cd04237" /db_xref="CDD:58603" misc_feature complement(1766352..1766381) /locus_tag="B565_1577" /note="putative feedback inhibition sensing region; other site" /db_xref="CDD:58603" misc_feature complement(order(1765770..1765775,1765782..1765787, 1766310..1766318,1766322..1766324)) /locus_tag="B565_1577" /note="putative nucleotide binding site [chemical binding]; other site" /db_xref="CDD:58603" misc_feature complement(order(1765845..1765853,1766217..1766225, 1766313..1766318,1766322..1766324)) /locus_tag="B565_1577" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:58603" misc_feature complement(1765101..1765529) /locus_tag="B565_1577" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene 1766680..1767312 /locus_tag="B565_1578" /db_xref="GeneID:10487495" CDS 1766680..1767312 /locus_tag="B565_1578" /codon_start=1 /transl_table=11 /product="peptide methionine sulfoxide reductase msrA" /protein_id="YP_004392230.1" /db_xref="GI:330829278" /db_xref="GeneID:10487495" /translation="MEQIISPADALPGRREAMVIGQQHAVNGNPTQGPWPENMEIAWF GMGCFWGVERLFWQQPGVYSTAAGYQGGVTQNPTYKEVCSGLTGHAETVQVVFDPAVI SYGDLLRLFWEQHDPAQGMRQGGDIGTQYRSVIFYGDESQQIIAQQSMAAYQQAMAAS GDSRAITTRILPLAPFYYAEDYHQQYLEKNPDGYCGLGGIGVCLPPSLNR" misc_feature 1766686..1767297 /locus_tag="B565_1578" /note="Peptide methionine sulfoxide reductase; Region: PMSR; cl00366" /db_xref="CDD:185944" gene complement(1767574..1767909) /locus_tag="B565_1579" /db_xref="GeneID:10487496" CDS complement(1767574..1767909) /locus_tag="B565_1579" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392231.1" /db_xref="GI:330829279" /db_xref="GeneID:10487496" /translation="MVVESEGYISLIEYLVESLGLFESQQQNDGEETIEDLVSGRVAS NLMAICEQNPQLDPKVRFAIMQEADAVVADLEEVLSAVWLRAPTPEQKTFLIEFIDLI KNLFDSAIG" misc_feature complement(1767580..1767909) /locus_tag="B565_1579" /note="Protein of unknown function (DUF3802); Region: DUF3802; pfam12290" /db_xref="CDD:152725" gene complement(1767967..1768389) /locus_tag="B565_1580" /db_xref="GeneID:10487497" CDS complement(1767967..1768389) /locus_tag="B565_1580" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004392232.1" /db_xref="GI:330829280" /db_xref="GeneID:10487497" /translation="MTLFEQAVRRSGPEHYSAEQVEQWALGSQHPGFVSQLREHHGWV AEQANVPLGFVTLSPDGHLSLLYVSADHQRQGLGNLLLTTALAGARGLGMTLITTEAS AFSYELFLRHGFTLTGLECVERGGVSFTRHRLHCCLPS" misc_feature complement(1767988..1768383) /locus_tag="B565_1580" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(1768440..1768823) /locus_tag="B565_1581" /db_xref="GeneID:10487498" CDS complement(1768440..1768823) /locus_tag="B565_1581" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392233.1" /db_xref="GI:330829281" /db_xref="GeneID:10487498" /translation="MDLTRLRHFLLTLPGATEDTPFGPEILVYRIAGKMFALVDWQAE PLTINLKCEPELALLLREIHPEVKPGWHMNKQHWNTVTLNSTLPDDLWQGWVHHSYER VVAGLPKAKRPQAPRPLSPTDDPTL" misc_feature complement(1768482..1768823) /locus_tag="B565_1581" /note="Protein of unknown function (DUF419); Region: DUF419; cl09948" /db_xref="CDD:186881" gene 1768942..1769724 /locus_tag="B565_1582" /db_xref="GeneID:10487499" CDS 1768942..1769724 /locus_tag="B565_1582" /codon_start=1 /transl_table=11 /product="dihydrolipoyllysine-residue acetyltransferase component of acetoincleaving system" /protein_id="YP_004392234.1" /db_xref="GI:330829282" /db_xref="GeneID:10487499" /translation="MLYHKTFELGPERDWVVFVHGAGGSSSIWFKQLRAYREHFNVLL LDLRGHGQSHQLQQVVKGHYSFREVTEDIVRLLDHLDIRRAHFVGISLGTILIRHLAE LCPERVKSMVLGGAILRLDIRSRVLVQLGRLGQHFLPYMWLYRLFAFIIMPRQHHQES RNLFVREARKLCQKEFKRWFRLATEVNPLMRYFRERSLPIPTLYVMGEEDHMFLAPVR EQVARDASSSLAVIEQCGHVCNVEQPEQFNRRTLAFLTAQPS" misc_feature 1768945..1769175 /locus_tag="B565_1582" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" misc_feature 1768987..1769691 /locus_tag="B565_1582" /note="Alpha/beta hydrolase family; Region: Abhydrolase_6; pfam12697" /db_xref="CDD:193173" gene complement(1770281..1770646) /locus_tag="B565_1583" /db_xref="GeneID:10487500" CDS complement(1770281..1770646) /locus_tag="B565_1583" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392235.1" /db_xref="GI:330829283" /db_xref="GeneID:10487500" /translation="MGSLTIVNALGVDVEIIEASPYQFMTLTIKNGQSAVANVATNFE RFILKIRVLGNIYFYDLNKGHWYGGDGDNHYPNPSSKVNIILTGDRGSYIETSYNYAA DNTTTMCKYASDTKALDKI" gene complement(1770948..1772033) /locus_tag="B565_1584" /db_xref="GeneID:10487501" CDS complement(1770948..1772033) /locus_tag="B565_1584" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392236.1" /db_xref="GI:330829284" /db_xref="GeneID:10487501" /translation="MKQIKGWPLALGMLWTLYSGAIAASDLGALLGGGNDSFKKVQPG QTIQLPEDHAAHPDYRSEWWYLTGNLKDEQGREYGMQWTLFRQGIEQELRTSNPWLTP QLWLAQFAITDLDRGSHQQDERASRQGPGLAGASGGQYWLREWRLTSQGAALFPATLK VQSKIGELNLTVTAAKPLVLQGKAGYSEKSPGNASFYYSYPRLTLRGTLTRDGETSSV TGQGWFDHEWSSSVLAEWQSGWDWFSLQLADGRELMLFRLRTKSGRANPENQPENRYG ILIERDGSSRVLAPDTIHLTPGNTWRGPKGQNYPVEWQLNAAGMSLTIKARQPNQAMT GRFDYWEGAVSVSGDAKGVGYLEMTGY" misc_feature complement(1770951..1771850) /locus_tag="B565_1584" /note="Hydroxyneurosporene synthase (CrtC); Region: CrtC; cl12101" /db_xref="CDD:159761" gene complement(1772030..1774459) /locus_tag="B565_1585" /db_xref="GeneID:10487502" CDS complement(1772030..1774459) /locus_tag="B565_1585" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="YP_004392237.1" /db_xref="GI:330829285" /db_xref="GeneID:10487502" /translation="MLPLKALLRLYRSHPWLLLMSLAGLVLGVSLVVAIELLNHSART NFVAARSQLAGEANYRLAPAGGLDEQLYVQLVTSQPALDAMPQIHGWLKDEEGRSFQL LGMDLFNPGPLRQLFGAQTASEPDFSLNRADSIWLAAPEAHRLGWQAGQSRRFVLGGS DGTSPRTLTLTLAGTFEPGAVPMERLLITDIGLAQPLLDKAGRLDRIVFKLSESEART LQAPLQTRYPNQPLWLEPISPALDASQLGDALALNLTALSLLAMAVGLFLVFNAQRFV QSVRRPQLAQLIILGMGPSRVLRWLILELLILATIGTLLGVLLGSLLALALMGQLTQA LADLYGPNPIDLLRLSPVSLLKALLIGLLGTLAANLPGWWQLLRQSPLELRAGSSRPP AHPWRRRVLAIAILLLCALCLWLPQTGLTGALFIAGGWLLAMSLWLPDALRGLLGWLR RRAGGPLTARLGVAETLYHLDRTAIAVMALQLAIAAAIGIGVMVSSFRSSVEIWLGQR LAADLYVTAPKGVAGSKGTLSEATLKTLLANPLVSAASRRSVHPARWQGQPIEWAQMD FIPQLKAAYPLLTGRWPTRPDEVLASEPLTVRLGVKVGQTLAISGEQGPRQFTVTGVY QDYGSDKGQILHAFEAGAVQSLALFSNDPEQLADRLRERFGEQLNLLSAPAIHSAALK VFDQTFVVTELLKLLILGIAFVGIGSAFMVLGLARRGELQTLQSLGLSPRHCRQLLVW QGAGLGLLTALLALPVGYGLAWVLIEVVNPRAFGWRLAFEAAPLHAVTALLLAPVCGA LASWYAARRVV" misc_feature complement(1772039..>1772713) /locus_tag="B565_1585" /note="ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]; Region: LolE; COG4591" /db_xref="CDD:34229" misc_feature complement(1772036..1772374) /locus_tag="B565_1585" /note="FtsX-like permease family; Region: FtsX; pfam02687" /db_xref="CDD:190390" gene complement(1774490..1775170) /locus_tag="B565_1586" /db_xref="GeneID:10487503" CDS complement(1774490..1775170) /locus_tag="B565_1586" /codon_start=1 /transl_table=11 /product="lipoprotein-releasing system ATP-binding protein LolD" /protein_id="YP_004392238.1" /db_xref="GI:330829286" /db_xref="GeneID:10487503" /translation="MLTLRNLCKSFDNGSERLPLFHHLDLALPAGEITLLLGQSGCGK STLLNLIAGLIAPDEGEIWLGETRIDTRSPDERARLRGRHFGIVYQDFNLLPTLNVAE NLALPLAINALPPDETKIDQLLHRLDMSHKRHAWPEQLSGGQRQRVALARALIHQPSW LLADEPTGSLDEHNAEQVMALMVAAVRGTGAGLLLVSHNPTYAALADRVLRLEGGQLI ELKGPRHD" misc_feature complement(1774514..1775170) /locus_tag="B565_1586" /note="ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]; Region: SalX; COG1136" /db_xref="CDD:31331" misc_feature complement(1774520..1775167) /locus_tag="B565_1586" /note="This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together...; Region: ABC_MJ0796_Lo1CDE_FtsE; cd03255" /db_xref="CDD:73014" misc_feature complement(1775036..1775059) /locus_tag="B565_1586" /note="Walker A/P-loop; other site" /db_xref="CDD:73014" misc_feature complement(order(1774577..1774579,1774676..1774681, 1774901..1774903,1775033..1775041,1775045..1775050)) /locus_tag="B565_1586" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73014" misc_feature complement(1774901..1774912) /locus_tag="B565_1586" /note="Q-loop/lid; other site" /db_xref="CDD:73014" misc_feature complement(1774724..1774753) /locus_tag="B565_1586" /note="ABC transporter signature motif; other site" /db_xref="CDD:73014" misc_feature complement(1774676..1774693) /locus_tag="B565_1586" /note="Walker B; other site" /db_xref="CDD:73014" misc_feature complement(1774658..1774669) /locus_tag="B565_1586" /note="D-loop; other site" /db_xref="CDD:73014" misc_feature complement(1774571..1774591) /locus_tag="B565_1586" /note="H-loop/switch region; other site" /db_xref="CDD:73014" gene 1775368..1775835 /locus_tag="B565_1587" /db_xref="GeneID:10487504" CDS 1775368..1775835 /locus_tag="B565_1587" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392239.1" /db_xref="GI:330829287" /db_xref="GeneID:10487504" /translation="MLHKQVSFIIDSKGNKQAAVVPIEIYNELMTLQKALSDNRPGER ELYHFNGKGAEAHGYPVGKRQNPGFMVLAGSTANGEDAASLREAVIELRHELLEKGVI VHRSQGGFVFTADQLFNSPSLAASLVAGNNRSGLDAWQNSAGYTLKQSGFGKK" gene 1775943..1777367 /locus_tag="B565_1588" /db_xref="GeneID:10487505" CDS 1775943..1777367 /locus_tag="B565_1588" /codon_start=1 /transl_table=11 /product="Citrate transporter" /protein_id="YP_004392240.1" /db_xref="GI:330829288" /db_xref="GeneID:10487505" /translation="MSALTPVILLLSLFIPPAHASSGPVLLTSSSIGLFCVGLFVLAY ALVMAEEYLQLRKSKPVLVAAGVIWILIGIAYAQQGMSPAAEQAFRHTLLEYAELMLF LLVAMTYINAMEDRRLFDALRAWLVRSGFHLRTLFWLTGGLAFCISPVADNLTTALLM CAVVLKVANGDRRFVNLACINIVIAANAGGAFSPFGDITTLMVWQAGKVQFGQFFTLL IPSLLNFLVPAILMSLMVPRHVPEADNEVVDLKRGARRIVALFLLTIITAVLCHSFLH LPPVLGMMLGLGYLQFFGFYLRKSLPRSLARKRALYERNGDEVRLRSLGSVVPFDVFN KVAKAEWDTLLFFYGVVMCVGGLGFMGYLELVSHWLYDAGDPTMANIFIGVLSSVIDN IPVMFAVLSMNPDMALGQWLLVTLTAGVGGSLLSIGSAAGVALMGQAHGMYTFFGHLK WLPAILLGYLVSIGAHLWLNSAQF" misc_feature 1776060..1777346 /locus_tag="B565_1588" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature order(1776072..1776083,1776117..1776158,1776210..1776233, 1776255..1776284,1776348..1776398,1776402..1776455, 1776468..1776539,1776603..1776647,1776717..1776755, 1776849..1776875,1776897..1776914,1776948..1776950, 1776960..1777013,1777065..1777112,1777173..1777232, 1777299..1777337) /locus_tag="B565_1588" /note="transmembrane helices; other site" /db_xref="CDD:29728" gene complement(1777444..1778655) /locus_tag="B565_1589" /db_xref="GeneID:10487506" CDS complement(1777444..1778655) /locus_tag="B565_1589" /codon_start=1 /transl_table=11 /product="Bicyclomycin resistance protein" /protein_id="YP_004392241.1" /db_xref="GI:330829289" /db_xref="GeneID:10487506" /translation="MPQSPTAQAAALSPRFLFILLGALAGLTPLAVDMYLPAIPAIAR DLATSIDGAQLTISAFLGGFAIGQLFYGPLADSYGRKPVILAGLIMFAIASVGCAMAD SLPELLAYRMLQAAGGAAGSVVVNALLRDLFEKDAFSRAMSFVILVMTLAPLVAPVVG GYISAHADWRVIFWLLVGISLLICLVMQWKIQETLKPEHRQPLNLGQILKNYWGVLSH RGAMGYVLCGSLSSSGMFAFLSGSPYVYIEYFKVPTEHYGWLFGLNILLMMVVTFVNS RLVKGVGAERMLQYGLLVLPCAGALLVYNAWSQTGGLWGIVIPVVLFVGHISLVGANA MTGLMGHFPQSAGTASALAGTLRFGIGALVGILVNLNPPHSPLPMAIAIACCGVGSTL SYWLLTGKRGD" misc_feature complement(1777453..1778574) /locus_tag="B565_1589" /note="bicyclomycin/multidrug efflux system; Provisional; Region: PRK11102" /db_xref="CDD:182964" misc_feature complement(1777468..1778568) /locus_tag="B565_1589" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature complement(order(1777573..1777575,1777582..1777587, 1777594..1777599,1777606..1777611,1777639..1777641, 1777648..1777653,1777663..1777665,1777672..1777677, 1777684..1777686,1777840..1777842,1777852..1777854, 1777861..1777863,1777873..1777875,1777885..1777887, 1777927..1777929,1777936..1777941,1777948..1777953, 1777960..1777962,1778197..1778199,1778215..1778220, 1778227..1778232,1778266..1778268,1778275..1778280, 1778287..1778292,1778299..1778304,1778440..1778445, 1778449..1778454,1778464..1778466,1778473..1778478, 1778485..1778487,1778536..1778541,1778545..1778553, 1778560..1778562)) /locus_tag="B565_1589" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene complement(1778726..1780033) /locus_tag="B565_1590" /db_xref="GeneID:10487507" CDS complement(1778726..1780033) /locus_tag="B565_1590" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392242.1" /db_xref="GI:330829290" /db_xref="GeneID:10487507" /translation="MARRWPSPCSTTIWLLILLQLAWLSWLLTFPVALDSDDALNFAH GVTRFSVLEFSPHFPGYPAFIWLARLINLAVDEPARAVQWASLLGSSLLAPLAALLAV RLWQRPSLLAPVWLLVLALPLTPTLALSGLSDGPALAAWLGTLLALQQRRIALAGLLL GLMLALRPSYFVLALLPLWLGLAQQGTHVRFVLPIALVGLISLLFVWQADGWAYFAEG RRFTDGHFTLWGNTAAAHGDRLLSWASTFNDQLTPLWPLAVGALLVLPLWQRSKNHPA ALSPLWTIYWLALLLWTLFGQNPDNPRHLAPVTLLGIVLLAGWLPLRGEGLVTVAGLL LLGATFTLPRPPAMVQAARLAETACPALVTQWGVRLLRETTSLAVTDGWYKGDAALAL SQGACRLSRRPIAASEMPTAVRQHWFAPRFAAEPGLWLAIPDP" gene complement(1780192..1780752) /locus_tag="B565_1591" /db_xref="GeneID:10487508" CDS complement(1780192..1780752) /locus_tag="B565_1591" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392243.1" /db_xref="GI:330829291" /db_xref="GeneID:10487508" /translation="MTIRPGLLALTLLLTLSGQAQAYSYAAAGKEPLIDAREALLGAA TDGKDASATLSEIADELTYLEQHHKVELQGPLAAAIKAKDAAATAALLNRAYKAEIER RLEGASQNLGDYQTAKVLVVKSKRFLDLILPSLSEEDRKAAEQALAKVLDAIGNPGVF GVGAKPADAAAFAAAEKALMAVLAPL" gene complement(1780787..1782211) /locus_tag="B565_1592" /db_xref="GeneID:10487509" CDS complement(1780787..1782211) /locus_tag="B565_1592" /codon_start=1 /transl_table=11 /product="amine oxidase, flavin-containing superfamily" /protein_id="YP_004392244.1" /db_xref="GI:330829292" /db_xref="GeneID:10487509" /translation="MSDNNKKSIAVLGAGPAGLMASWRLRRAGFAVTLFEQEPVVGGM CATQTFKGRDGEYRFDYGGHRFITKNPELLAFIDELMGDDLLHAERKSVIRFGGRTYD YPLNLPNLLKTAPLALMAGAVKDLLLLPFSKKPDDFAKASFAEWIQSHFGRTLYRQFF EGYTGKLWGINPDKLSADWAGQRISLIDLKDVARRLLPRRNGSISVRTYARKYRYPKY GFGQIFTTLGERLVAEGVELKTGATITRLEQADGRIERVYWKQDDVEQSERFDQVIST LPLPLTCQHLGLPCDLHYRSLRFVNMPLKQENLSDNTWQYLSDPHILATRLQEPRRRS PFMAPQGQTSVMLEIPCNPGDATWQAPLSDLRGRVTADLASLGVDTAKLGDETFEARS EYAYPLMDLGYQARRNEAIKALMPITNLIITGRQGTFRYIFTDTAMEMGMMAADMVID GVDRRHAIFNHRNENTVIETQSVA" misc_feature complement(1780799..1782205) /locus_tag="B565_1592" /note="hypothetical protein; Provisional; Region: PRK07208" /db_xref="CDD:180885" misc_feature complement(1780994..1782187) /locus_tag="B565_1592" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" gene complement(1782314..1783153) /locus_tag="B565_1593" /db_xref="GeneID:10487510" CDS complement(1782314..1783153) /locus_tag="B565_1593" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392245.1" /db_xref="GI:330829293" /db_xref="GeneID:10487510" /translation="MFASFLITLREGLEAFLLVGICLSYLAKLGASRYNKFIYLGVGL GLVASLVVAFLFQVVVSQFESERYNHLLMAGILIFATLVLTYMAIWMQKQAKSQVGAM TARIDAAIDGGNLFGLVLLAFLAVMREGFETVLFFSALLYSGQGVDLQSGLIGALAGL LVSIALVWGLLRSTRKVALAPFFRWTGLLIIIIAAGLLSSAVNMLQAAEIITFWTTPV FDISHILDDQGVFGTFLRALFGYNASPAGLQLLTWALYLAIFVTLWQRSYRPQVSAAT GKG" misc_feature complement(1782350..1783153) /locus_tag="B565_1593" /note="Iron permease FTR1 family; Region: FTR1; cl00475" /db_xref="CDD:163840" gene complement(1783153..1786143) /locus_tag="B565_1594" /db_xref="GeneID:10487511" CDS complement(1783153..1786143) /locus_tag="B565_1594" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392246.1" /db_xref="GI:330829294" /db_xref="GeneID:10487511" /translation="MLKSSFSAYLSPLLALVLLLASPFAFAQQMSSGMLAYEEGSAPR LVTANLSAGSVTLLERDSGKRLKEVPLGGDLRQLARADDATLLVTDYSGDRLLLLDDD LDLEKTIPTGHRPYGVIFDAKRQWFWVTLFESARLQAYDTAGKLQLEVATAETPRGLA LTDDDRLLLTHAMTGQLAIYDLAKLGNGAKGASLPKPKLITLAETHSDTPSDSQGLPR LLDGIALSPDGSEAWLPHVLWSFSHPFQFQSTVFPAVSIIDLDEEKERVDERKQLFLQ INLPSVGNRSQIVSNPFAARFAADGKRVYLTLAGSEDLLVFDLSRSGKSNNNRHRRKK FQGGAKATQLLRHLPGQNPRDLLIDGDHILVHNAMGQDLTRLNSGGSGPFARVTVDVP HFAKLVETDPRPEPLQRGERLFNLGNTASNSRFPMAGDNWMSCNSCHLDGFNFTNRYL MAAHRQQSGDNAINGHANLTNMVAGDFVGEYLRMTQQTQGGMGHDTRDGAEAVDPARP QPEVKAMMEDLHAFVTADGNLPYLANWLRLDAPRTDPAKAPTTHPKEWLNSASCQNCH SQAFKDWSESNHRLMGNSHPYYKVVQALARETEGEAFGQWCQGCHMPQQVMTGQLDLP KGSHMFEQGGASLIAAHKAGEPVVEEGTGCVLCHRITKVEDAGGNSAFTVNLKDRESY VFEDAAGGSLKHWLAERQINARPAAHKASYQKDFYRDAALCKSCHNEFAPGTGANIVN TWDEWEKSSFAKAEDPAKRRTCIDCHMNPEPGNGGAPVAGQSTENGTMKARLYRHNFT GAQHQLVGLRNPELEQESLALLRSSATLSARIEQAADSQQLVVRVANTGAGHALPTGV ADFRELWLELTVTDASGKVVLASGQPVDGAVPEDARLFRKVFGDAEGKPVGLKFWRYA KLLEDTRIPADGWRDEAWLLPADAQGPFKADIKLNFRTYPKWVNDAVRAAEPSLPEPP IVQLNRLQLTLQPLPVTPATEPQS" gene complement(1786148..1786597) /locus_tag="B565_1595" /db_xref="GeneID:10487512" CDS complement(1786148..1786597) /locus_tag="B565_1595" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392247.1" /db_xref="GI:330829295" /db_xref="GeneID:10487512" /translation="MTSLSLSPRQFWQWLAYHHQAAEGTLYLMFFSGLLLWEPLTPLW SLARWNLFFHVMLSLTLFPLLFGAFWLSHRSLLNRSNKPFLRTTGRIIEALLLICLAS GLLLVLHGTPGDAMGNLASWAHWLSALALTPLVLRHAWRWTILKWRS" gene complement(1786726..1787211) /locus_tag="B565_1596" /db_xref="GeneID:10487513" CDS complement(1786726..1787211) /locus_tag="B565_1596" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392248.1" /db_xref="GI:330829296" /db_xref="GeneID:10487513" /translation="MRRFNFMLNGSRLMMFPFYIGILICVVLLMVKFAMQLYQLSVNI FEIPYLDLITGVLTLVDFILVAQMLILVAICGYVQFIQTEEQRASLSSNWLSKINFAS LKLIVINSLVTIAGVEVLKAFLEDGIINEVDMKWSVVVFLAFSLAALIYAVTERMAEH K" misc_feature complement(1786729..1787184) /locus_tag="B565_1596" /note="Uncharacterized protein family, UPF0114; Region: UPF0114; cl01078" /db_xref="CDD:186322" gene 1787440..1787838 /locus_tag="B565_1597" /db_xref="GeneID:10487514" CDS 1787440..1787838 /locus_tag="B565_1597" /codon_start=1 /transl_table=11 /product="IS3 family transposase A" /protein_id="YP_004392249.1" /db_xref="GI:330829297" /db_xref="GeneID:10487514" /translation="MGQGVKRTQRDYSLTFKLALVEQIEKGELTYKQAQVRYGIQGRS TVLVWLRKHGRQDWSQGASVRAGRSITMPDPDNQTPEQRIKELEQQLALMSQKAQFFE AVVDVLKNDYGVSIVKKRPGKSSRSGKSRS" gene 1788456..1788659 /locus_tag="B565_1598" /db_xref="GeneID:10487515" CDS 1788456..1788659 /locus_tag="B565_1598" /codon_start=1 /transl_table=11 /product="IS3 family transposase B" /protein_id="YP_004392250.1" /db_xref="GI:330829298" /db_xref="GeneID:10487515" /translation="MTDGYDCYQNALAERVNGILKGELLLQSPQDLAQAREMVREAVD IYNAERPHHALKYRTPDAVHRGF" misc_feature <1788471..1788635 /locus_tag="B565_1598" /note="putative transposase OrfB; Reviewed; Region: PHA02517" /db_xref="CDD:177368" gene 1788815..1789804 /locus_tag="B565_1599" /db_xref="GeneID:10487516" CDS 1788815..1789804 /locus_tag="B565_1599" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392251.1" /db_xref="GI:330829299" /db_xref="GeneID:10487516" /translation="MRIGLLLSMGMLVASGVQAQELGAIPGESGFSGSVLAGASVGET KSNFATGNAGSERIDALGAAAQQRHLDPVINGDLRYTFASTGSQLFLGNLIQDAIRGD GTQQFGLRQQLGDKGIVAGSLVFNATPVKVWRDPFAVGVARQDCDVRSHGARLAWDNI WGSAFSGSITSRDVKVDGESSGEQYGRAVMGMLDRNGRVNFAELSYQFRLTDDQFLEP ALRYEKADLAGSAESYVSKGLQLTYAKTSPRWSFVSNLYLGKRDYDEANPLFGQRADS RDMAIDATLFWHQLFGIAPLSALLSASYANADSWIDFYDIRATSITTGLLYRF" misc_feature 1788902..1789798 /locus_tag="B565_1599" /note="Protein of unknown function (DUF2860); Region: DUF2860; pfam11059" /db_xref="CDD:151505" gene complement(1790030..1790105) /locus_tag="B565_t042" /db_xref="GeneID:10487517" tRNA complement(1790030..1790105) /locus_tag="B565_t042" /product="tRNA-Asn" /db_xref="GeneID:10487517" gene complement(1790110..1790185) /locus_tag="B565_t043" /db_xref="GeneID:10490027" tRNA complement(1790110..1790185) /locus_tag="B565_t043" /product="tRNA-Asn" /db_xref="GeneID:10490027" gene 1790750..1792408 /locus_tag="B565_1600" /db_xref="GeneID:10490028" CDS 1790750..1792408 /locus_tag="B565_1600" /codon_start=1 /transl_table=11 /product="putative sulfate transporter YchM" /protein_id="YP_004392252.1" /db_xref="GI:330829300" /db_xref="GeneID:10490028" /translation="MARFGRDLIAGVTVGIIAIPLAMALAIASGVPPQHGLYTAIIAG IVIAVTGGSRYSISGPTAAFVVILYPVAQQFGVGGLLMATLISGLFLVAMGMARLGRL IEYIPPSVTLGFTGGIAIVIATLQIKDFFGLSVPEMPETYLGKVEALAAALPSWQWGD TLVGVATLVVLLLWPRLRLPVPGHLPAVLVGVGLGFGLHYFGVDVATIGSKFSYTLAD GTQGMGIPPIAPTLVMPWALPGPDGLPVEWNLAAVERLLPAAFSMAMLGAIESLLCAV VLDGMTGRKHSSNAELVGQGLGNIFAPFFGGITATAAIARSAANVRAGATSPVSGIVH ALVVLAAILVLAPWLSWLPLSAMAALLLIVAWNMSEAHKVVELIRRAPKSDVLVLLVC LSLTVIFDMVIAITFGVILASLLFMREIAKMTKLHDLAEHKRYAHEVPDNGLLYKING PLFFAAAERVFAELEAQVKGHQVLVLQMEAVSILDAGGLSAFLHFGKQMAKAGVELRV AELQFQPLKTLARAKVRPQPGKLEFYGSLEEALKGEHLHEAAVN" misc_feature 1790753..1792396 /locus_tag="B565_1600" /note="putative transporter; Provisional; Region: PRK11660" /db_xref="CDD:183265" misc_feature 1791029..1791904 /locus_tag="B565_1600" /note="Sulfate transporter family; Region: Sulfate_transp; cl00967" /db_xref="CDD:193990" misc_feature 1792049..1792360 /locus_tag="B565_1600" /note="Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function; Region: STAS_SulP_like_sulfate_transporter; cd07042" /db_xref="CDD:132913" gene 1792592..1792679 /locus_tag="B565_t044" /db_xref="GeneID:10487518" tRNA 1792592..1792679 /locus_tag="B565_t044" /product="tRNA-Ser" /db_xref="GeneID:10487518" gene 1792864..1793466 /locus_tag="B565_1601" /db_xref="GeneID:10490029" CDS 1792864..1793466 /locus_tag="B565_1601" /note="part of RecFOR complex that targets RecA to ssDNA-dsDNA junction" /codon_start=1 /transl_table=11 /product="Gap repair protein with type I DNA topoisomerase domain" /protein_id="YP_004392253.1" /db_xref="GI:330829301" /db_xref="GeneID:10490029" /translation="MKFSPLLDEMMKALQVLPGVGPKSAQRMAFTLLERERSGGLRLA QLLSRALTEIGHCSHCRTFTENDRCDICANPKREENGLLCVVESPADVAAIEQTGQFS GRYFVLMGHLSPLDGIGPEELGLDILERRLKEEHISELILATNPTIEGDATAWYIADM ARTAGVEVSRIAHGVPVGGELELVDGTTLSHSLMGRQRLK" misc_feature 1792867..1793460 /locus_tag="B565_1601" /note="recombination protein RecR; Reviewed; Region: recR; PRK00076" /db_xref="CDD:178844" misc_feature 1792993..1793094 /locus_tag="B565_1601" /note="RecR protein; Region: RecR; pfam02132" /db_xref="CDD:145340" misc_feature 1793104..1793439 /locus_tag="B565_1601" /note="TOPRIM_recR: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in Escherichia coli RecR. RecR participates in the RecFOR pathway of homologous recombinational repair in prokaryotes. This pathway provides a...; Region: TOPRIM_recR; cd01025" /db_xref="CDD:173775" misc_feature order(1793122..1793127,1793134..1793136,1793296..1793298, 1793302..1793304,1793308..1793310) /locus_tag="B565_1601" /note="putative active site [active]" /db_xref="CDD:173775" misc_feature order(1793122..1793124,1793296..1793298) /locus_tag="B565_1601" /note="putative metal-binding site [ion binding]; other site" /db_xref="CDD:173775" misc_feature order(1793140..1793148,1793152..1793157,1793278..1793280, 1793284..1793286,1793290..1793292,1793299..1793301, 1793335..1793337,1793365..1793400,1793404..1793406, 1793419..1793421,1793425..1793427,1793431..1793439) /locus_tag="B565_1601" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:173775" gene 1793643..1795556 /locus_tag="B565_1602" /db_xref="GeneID:10487519" CDS 1793643..1795556 /locus_tag="B565_1602" /codon_start=1 /transl_table=11 /product="chaperone protein htpG" /protein_id="YP_004392254.1" /db_xref="GI:330829302" /db_xref="GeneID:10487519" /translation="MTQSVHAETHGFQTEVKQLLSLMAHSLYSNKEVFLRELISNASD AADKLRFKALSDASLFENDGQLRVRLVVDKEKRTLTISDNGIGMTRDQVIEHLGTIAK SGTAEFFKNLSGDQGKDSQLIGQFGVGFYSAFIVADKVTVVSRAAGTAPEQGVQWESE GEGSFTVADVTKEGRGTDVILHLRAEEDEFLDDWRLRSVVGKYSDHISVPVEMYKEGT PDREEDGETIVGTPGEWEQVNRATALWTRNPKDIKDEEYQEFYKHVAHDFEDPLLWGH NRVEGAQEYTSLLYVPARAPFDLYNREQKHGLKLYVQRVFIMDDAEQFMPTYLRFVKG VLDSNDLPLNVSREILQDNKVTASLRKACSKRVLTMLSKLAKDDAEKYAKFWKEFGNV LKEGPAEDYANREEIAKLLRFASTAGEGEAQTVSLEDYVGRMKEGQQKIYYITADSYA AAKNSPHLEIFRKKGVEVLLMWERVDEWLMSHLTEFDGKQLISVTRGELDLGDLEDEA SKQAQEEAEKANAGLVERVKKSLGDAVKEVRVTHRLTDSPSCIVTDAYGMSTQMIKLM RAAGQPVPEQKYILELNPDHALVKKLDTIEDEALFGEWVTLLHEQAQLAEQGGLNDPA SFVSRINRLLLQA" misc_feature 1793658..1795553 /locus_tag="B565_1602" /note="heat shock protein 90; Provisional; Region: PRK05218" /db_xref="CDD:179965" misc_feature 1793742..1794086 /locus_tag="B565_1602" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(1793751..1793753,1793763..1793765,1793772..1793774, 1793883..1793885,1793889..1793891,1793895..1793897, 1793901..1793906,1794021..1794032,1794066..1794068, 1794072..1794074) /locus_tag="B565_1602" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 1793763..1793765 /locus_tag="B565_1602" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(1793895..1793897,1793901..1793903,1794021..1794023, 1794027..1794029) /locus_tag="B565_1602" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(1795662..1796447) /locus_tag="B565_1603" /db_xref="GeneID:10487520" CDS complement(1795662..1796447) /locus_tag="B565_1603" /codon_start=1 /transl_table=11 /product="peptide ABC transporter ATP-binding protein" /protein_id="YP_004392255.1" /db_xref="GI:330829303" /db_xref="GeneID:10487520" /translation="MIEPSLLQVRGLSKTYQNRTGLFRRQAVEAIKPLSFDLEVGQTL AIVGEAGSGKSTLARILAGMIEPTSGDIAIDGQLMVHGDYQTRCKLLRMIFQDPNTSL NRKIRVGQILETPLRLNTEMTEEERREKVVQTLRMVGMLPDHALFYPQMLSSGQQQRV ALARALILNPKIVVADEALSTLDISVRSQIINLLLEMQETMGLSYVLVANDLGIVSHI SDEVLVMHEGRVVERGKTLKVFADPQHEVTRRLIQNYNNEYRK" misc_feature complement(1795674..1796435) /locus_tag="B565_1603" /note="antimicrobial peptide ABC system ATP-binding protein SapF; Provisional; Region: PRK15112" /db_xref="CDD:185067" misc_feature complement(1795746..1796432) /locus_tag="B565_1603" /note="The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane...; Region: ABC_NikE_OppD_transporters; cd03257" /db_xref="CDD:73016" misc_feature complement(1796283..1796306) /locus_tag="B565_1603" /note="Walker A/P-loop; other site" /db_xref="CDD:73016" misc_feature complement(order(1795818..1795820,1795917..1795922, 1796160..1796162,1796280..1796288,1796292..1796297)) /locus_tag="B565_1603" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73016" misc_feature complement(1796160..1796171) /locus_tag="B565_1603" /note="Q-loop/lid; other site" /db_xref="CDD:73016" misc_feature complement(1795965..1795994) /locus_tag="B565_1603" /note="ABC transporter signature motif; other site" /db_xref="CDD:73016" misc_feature complement(1795917..1795934) /locus_tag="B565_1603" /note="Walker B; other site" /db_xref="CDD:73016" misc_feature complement(1795899..1795910) /locus_tag="B565_1603" /note="D-loop; other site" /db_xref="CDD:73016" misc_feature complement(1795812..1795832) /locus_tag="B565_1603" /note="H-loop/switch region; other site" /db_xref="CDD:73016" gene complement(1796482..1797480) /locus_tag="B565_1604" /db_xref="GeneID:10487521" CDS complement(1796482..1797480) /locus_tag="B565_1604" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter ATPase" /protein_id="YP_004392256.1" /db_xref="GI:330829304" /db_xref="GeneID:10487521" /translation="MPLLDIRNLTIEIDTPQGKVKAVDKVSLTLTEGEIRGLVGESGS GKSLIAKVIVGIEKDNWTVRADRMRFNDMDLLTMAPKERRRIMGREIAMIFQDPISCL DPSEEIGTQLEEAIPTDSFEGQFWQRFQWRKKKAIALLHRVGVKDHRKVMRAYPHELS DGMCQKVMIAMAIANQPRLLVADEPTSAMESTTHSQILRLLDKMNKLGNTTILIISND IAAIANLTDTINVMYCGQMVEVGTREQILETPHHPYTDALLKSIPDFDKLVRHKSRLE TLPGVIPPLQHLPIGCRLGPRCPYAQKQCVQTPLMNKIKGHQFSCHFPLNMEEPKK" misc_feature complement(1796491..1797480) /locus_tag="B565_1604" /note="antimicrobial peptide ABC transporter ATP-binding protein; Provisional; Region: PRK15093" /db_xref="CDD:185049" misc_feature complement(1796758..1797474) /locus_tag="B565_1604" /note="The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane...; Region: ABC_NikE_OppD_transporters; cd03257" /db_xref="CDD:73016" misc_feature complement(1797340..1797363) /locus_tag="B565_1604" /note="Walker A/P-loop; other site" /db_xref="CDD:73016" misc_feature complement(order(1796830..1796832,1796929..1796934, 1797193..1797195,1797337..1797345,1797349..1797354)) /locus_tag="B565_1604" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73016" misc_feature complement(1797193..1797204) /locus_tag="B565_1604" /note="Q-loop/lid; other site" /db_xref="CDD:73016" misc_feature complement(1796977..1797006) /locus_tag="B565_1604" /note="ABC transporter signature motif; other site" /db_xref="CDD:73016" misc_feature complement(1796929..1796946) /locus_tag="B565_1604" /note="Walker B; other site" /db_xref="CDD:73016" misc_feature complement(1796911..1796922) /locus_tag="B565_1604" /note="D-loop; other site" /db_xref="CDD:73016" misc_feature complement(1796824..1796844) /locus_tag="B565_1604" /note="H-loop/switch region; other site" /db_xref="CDD:73016" misc_feature complement(1796512..1796775) /locus_tag="B565_1604" /note="Oligopeptide/dipeptide transporter, C-terminal region; Region: oligo_HPY; cl07097" /db_xref="CDD:195461" gene complement(1797480..1798373) /locus_tag="B565_1605" /db_xref="GeneID:10487522" CDS complement(1797480..1798373) /locus_tag="B565_1605" /codon_start=1 /transl_table=11 /product="peptide ABC transporter permease SapC" /protein_id="YP_004392257.1" /db_xref="GI:330829305" /db_xref="GeneID:10487522" /translation="MQDKSNIYPELKILSPLEQTWASYSRNPLAMAGLWCFLLLLLIT LVGPLVVPYGIDEQHTDKLLLAPSWAATGNIDYFLGTDDLGRDMLSRLVVGARLTFGY ALVVVVIAMVVGSAIGILGGMSKGLKSSVLHHLLDTLLSIPSLLMAIIMVAIMGPGFG NTLIAITLALIPPFIRATYNAVHAEMQKEYITASRLDGSPPFRIMRLAILPNIVETLV AQTTRTLSAAILDISAVGFLGLGAQSPQPEWGTMLADSSDLIYLAPWTVTLPGIAILF SVLVTNLVGEGIREALKEGND" misc_feature complement(1797489..1798358) /locus_tag="B565_1605" /note="antimicrobial peptide ABC transporter permease SapC; Provisional; Region: PRK15111" /db_xref="CDD:185066" misc_feature complement(1798170..1798337) /locus_tag="B565_1605" /note="N-terminal TM domain of oligopeptide transport permease C; Region: OppC_N; pfam12911" /db_xref="CDD:193384" misc_feature complement(1797540..>1797935) /locus_tag="B565_1605" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(1797588..1797590,1797618..1797620, 1797627..1797629,1797666..1797668,1797882..1797884)) /locus_tag="B565_1605" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature complement(order(1797540..1797545,1797552..1797557, 1797564..1797569,1797573..1797578,1797585..1797590, 1797618..1797623,1797663..1797668,1797675..1797686, 1797705..1797707,1797714..1797719,1797759..1797761, 1797810..1797812,1797819..1797824,1797834..1797836, 1797840..1797845,1797852..1797854,1797858..1797860, 1797864..1797869)) /locus_tag="B565_1605" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(1797738..1797740,1797750..1797755, 1797771..1797809)) /locus_tag="B565_1605" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene complement(1798409..1799368) /locus_tag="B565_1606" /db_xref="GeneID:10487523" CDS complement(1798409..1799368) /locus_tag="B565_1606" /codon_start=1 /transl_table=11 /product="peptide ABC transporter permease SapB" /protein_id="YP_004392258.1" /db_xref="GI:330829306" /db_xref="GeneID:10487523" /translation="MLLYTLRRINLLLITLLALTFVAYLLDYRLIGHQLSFWSGYPDF LRRIFAGDLGLSSVSGLPVLDEIRHYFPATLILCLAAFAISLLVGIPLGTLAALSQGK TLDLSIMTAGLIGYAVPVFWLALLVVMLFSLDLGWLPASGQISLLYDVPPITGIAVID VLLSNEPWRQAALHDALRHLILPSLVLAVVPTTEVIRHVRSSLIDVMKQNYIKAAASR GLSKAQIVWRHGLKNALPPVLPLLGLQLGSVLTSAMITEVVFEWHGIGRWLISSIALQ DYAAIRGATLVVASFVILTSVSTELLTTLIYPARRKELYAKQD" misc_feature complement(1798502..1799158) /locus_tag="B565_1606" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(1798502..1798504,1798511..1798516, 1798520..1798525,1798532..1798537,1798565..1798570, 1798595..1798600,1798607..1798618,1798637..1798639, 1798646..1798651,1798691..1798693,1798742..1798744, 1798751..1798756,1798766..1798768,1798772..1798777, 1798784..1798786,1798790..1798792,1798796..1798801, 1798985..1798987,1798991..1798996,1799003..1799032, 1799036..1799047,1799078..1799080,1799093..1799098, 1799105..1799110)) /locus_tag="B565_1606" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(1798601..1798618,1798985..1799029)) /locus_tag="B565_1606" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature complement(order(1798535..1798537,1798565..1798567, 1798574..1798576,1798598..1798600,1798814..1798816, 1798985..1798987)) /locus_tag="B565_1606" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature complement(order(1798670..1798672,1798682..1798687, 1798703..1798741)) /locus_tag="B565_1606" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene complement(1799371..1800972) /locus_tag="B565_1607" /db_xref="GeneID:10487524" CDS complement(1799371..1800972) /locus_tag="B565_1607" /codon_start=1 /transl_table=11 /product="peptide ABC transporter periplasmic binding protein" /protein_id="YP_004392259.1" /db_xref="GI:330829307" /db_xref="GeneID:10487524" /translation="MRMLTPLLLGMLVLVTGCQKQPEASKTGLIYCAEGSPLSFNPHV SNSGVTLDASARPLYDRLLEVNPNTLALEPALATNWHVSEDGLTYTLTLRKGVTFHHT PWFKPTRTFNADDVVFTYARQLDEQHPYHNVSGGDYPYFYSLGQDLLIKRVSKKGPQT VVFELNQPNASFLATLASDYAVILSAEYAEQMLQAGTPALLDSRPIGTGPFSFKEYRH NEFIRYLRHPGYWGGDAKIEQLVYDITPKSAKRLAKLLTGECDVMSTPSASQLSVIKQ NPALSLSVQSGMNVAFLALNTRKPPFNNVKVRQAIASAINIDNLLQAVYFDTGLPANS LLPTLSWGYNPSLPERKPDLKRARQLLKEAGLEKGFEMQVLVQPDARPYNPDAVKTAQ LIRSDLAKVGIKLKIVQREWPVIEGRLTKGQYDSLLSGWIADNADPDNFFRQLLSCSA VERGNNYSRWCSPAFDQLLDDAVTTPQLSFRLRNYYYAQTLLNEQLPLIPLAHALRTQ VSRSDIEGLTLMPFGGTSFNQAHRE" misc_feature complement(1799422..1800891) /locus_tag="B565_1607" /note="The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold; Region: PBP2_DppA_like; cd08493" /db_xref="CDD:173858" misc_feature complement(1799623..1800759) /locus_tag="B565_1607" /note="Bacterial extracellular solute-binding proteins, family 5 Middle; Region: SBP_bac_5; pfam00496" /db_xref="CDD:189574" misc_feature complement(order(1799671..1799673,1799677..1799688, 1799725..1799727,1799737..1799739)) /locus_tag="B565_1607" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173858" gene complement(1801075..1802103) /locus_tag="B565_1608" /db_xref="GeneID:10487525" CDS complement(1801075..1802103) /locus_tag="B565_1608" /codon_start=1 /transl_table=11 /product="Psp operon transcriptional activator PspF" /protein_id="YP_004392260.1" /db_xref="GI:330829308" /db_xref="GeneID:10487525" /translation="MTTATESLLGESNAFLEIIEQASRLAPLRKPVLIIGERGTGKEL IAHRLHYLSARWDQSFVTINCATLSESLLETELFGHEAGSFTGAAKRHQGRFERADGG TLFLDELATTSTRVQEKLLRVIEYGEFERVGGAKPLKVDVRLVCATNEDLPALADKGQ FRHDLLDRLAFDVITLPPLRERREDILMLAEHFAHSMTRELGYPLFAGFSRKATQLLL DYHWPGNVRELKNVVERSIYRQGNPQLPLSTLVLNPFDSPWRPQVTQPAQEDRSEVQS ASPLALPLDLKQAVAEYEINLLKQAMQQSQYNQRKAAQLLALSYHQFRGMLRKYQLLD GDNDAEQE" misc_feature complement(1801114..1802082) /locus_tag="B565_1608" /note="psp operon transcriptional activator PspF; Region: phageshock_pspF; TIGR02974" /db_xref="CDD:163093" misc_feature complement(1801570..1802055) /locus_tag="B565_1608" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(1801975..1801998) /locus_tag="B565_1608" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(1801657..1801659,1801783..1801785, 1801972..1801995)) /locus_tag="B565_1608" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(1801780..1801797) /locus_tag="B565_1608" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(1801600..1801602) /locus_tag="B565_1608" /note="arginine finger; other site" /db_xref="CDD:99707" gene 1802300..1802986 /locus_tag="B565_1609" /db_xref="GeneID:10487526" CDS 1802300..1802986 /locus_tag="B565_1609" /codon_start=1 /transl_table=11 /product="phage shock protein A" /protein_id="YP_004392261.1" /db_xref="GI:330829309" /db_xref="GeneID:10487526" /translation="MSIFSRLADIINSNLTALLDKAEDPQKMVRLIIQEMEDELVKER SNLARFLASQKEIGRQVARHQERVDEWQAKAELALTKGREDLARAALIEKKKQTELSE TLYREQQAVDSGIEKLGEEIRQLEAKLEDARARQRAMAIRTEAASSRLNVQSQVARGE SQAVVSKFERMERRIDEMEARADLGQSDKALAQQFAELEVDDQISRELEAMRQKLGQG DSKSEGKQGE" misc_feature 1802300..1802950 /locus_tag="B565_1609" /note="phage shock protein PspA; Provisional; Region: PRK10698" /db_xref="CDD:182657" misc_feature 1802300..1802950 /locus_tag="B565_1609" /note="phage shock protein A; Region: phageshock_pspA; TIGR02977" /db_xref="CDD:132022" gene 1802990..1803226 /locus_tag="B565_1610" /db_xref="GeneID:10487527" CDS 1802990..1803226 /locus_tag="B565_1610" /codon_start=1 /transl_table=11 /product="phage shock protein B" /protein_id="YP_004392262.1" /db_xref="GI:330829310" /db_xref="GeneID:10487527" /translation="MEDLLGVLMVPMVVFMVVVAPIWLVLHYRAKGRIGAGLADSERE QLQGLLARTEKMQERVGALESILDAEVPGWRNKV" misc_feature <1803047..1803220 /locus_tag="B565_1610" /note="Phage shock protein B; Region: PspB; cl05946" /db_xref="CDD:186672" gene 1803223..1803627 /locus_tag="B565_1611" /db_xref="GeneID:10487528" CDS 1803223..1803627 /locus_tag="B565_1611" /codon_start=1 /transl_table=11 /product="phage shock protein C" /protein_id="YP_004392263.1" /db_xref="GI:330829311" /db_xref="GeneID:10487528" /translation="MSSVSREGRNLYRDPQRGKIAGICAGLAEYFGVETWIVRLLAIS GLIFAGFITFTAYIAAWFLLDKKPVTLYSQEDADFAEVRMKARSWQAGITPHQALGRI AQELDALEPRVQRIEKLVTSREFTLQREFRKL" misc_feature 1803244..1803624 /locus_tag="B565_1611" /note="PspC domain; Region: PspC; cl00864" /db_xref="CDD:193957" misc_feature 1803244..1803624 /locus_tag="B565_1611" /note="phage shock protein C; Region: phageshock_pspC; TIGR02978" /db_xref="CDD:132023" gene 1803730..1805136 /locus_tag="B565_1612" /db_xref="GeneID:10487529" CDS 1803730..1805136 /locus_tag="B565_1612" /codon_start=1 /transl_table=11 /product="amino acid regulated cytosolic protein" /protein_id="YP_004392264.1" /db_xref="GI:330829312" /db_xref="GeneID:10487529" /translation="MILNKLEQKLTRLQHKANDVVNRVRDRHIRLAVTGLSRSGKTAF ITALVNQLEHAAIDGRLPLWDALRQGRILGARRVPQLNAHIPTFAYERGLDSLFGDPP AWPEPTRGVAEVRLEIRYRTRHPLRKHLGEISTLYVDLVDYPGEWLLDLPLLEMNYEQ WSEQVREQLRRPELQALAASWLTPGGQAEQRFEERPVAELAERYTAYLHACKQELGLH LIQPGRFVLPGEYAGAPMLQFVPWVWEMPVGEPADGTLYATLKQRFEQYKQHLVQGFY EQHFAGFDRQIVLVDCLQPLNAGAASFGDMQQAIARIMESFAYGKSNWWRRLFSPRID KLLFVASKADHVTPEQHGPMVSLLQHLVRSGRGQARFEGITTECLALAAIKATEVGKG VANGREFPAIRGTSLSGEPLLLFPGEVPPHIPPAQWWNSQGFDFQAFRPMPMSAHQAL PHIRLDAALEFLLGDHLE" misc_feature 1803814..1805130 /locus_tag="B565_1612" /note="YcjX-like family, DUF463; Region: DUF463; cl01193" /db_xref="CDD:154257" gene 1805190..1806221 /locus_tag="B565_1613" /db_xref="GeneID:10487530" CDS 1805190..1806221 /locus_tag="B565_1613" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392265.1" /db_xref="GI:330829313" /db_xref="GeneID:10487530" /translation="MNDQIKERPPLQGKVILEPALTVASDERPPAPAQRLEEASFERL DELDELTEVESALVSKPRRRHRLLAWGLGAVGLLSLGQYGAFLYDQFLTTPLWGSAWL AASALVAAGTASVVGREWLRLRTLKRRQDVRSRAEDLLAHQGVGQGQAFCEGLAVKSG DKGREGYQTWLAQLDESHSDREVLTLYSQLVLSERDKLAQARVAKWSGEAAVLVALSP LATVDMMLMLWRNLRMIEDIADVYAIELGYWSRIRLIRQVFRNMLYAGATELVTEVGM DLLGAEFAAKLSARAAQGVGAGLLTARLGLRTIEACRPLPWCADEKPKLGELRKRLIG QLAGYLNKS" misc_feature 1805190..1806200 /locus_tag="B565_1613" /note="hypothetical protein; Provisional; Region: PRK05415" /db_xref="CDD:180063" misc_feature <1805541..1806197 /locus_tag="B565_1613" /note="Domain of unknown function (DUF697); Region: DUF697; cl12064" /db_xref="CDD:159724" gene 1806412..1807335 /locus_tag="B565_1614" /db_xref="GeneID:10487531" CDS 1806412..1807335 /locus_tag="B565_1614" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="YP_004392266.1" /db_xref="GI:330829314" /db_xref="GeneID:10487531" /translation="MNFTFRQIRYFVAVADSFSVSRAAAELHISQSAVTSAIRELETE LGAPLFERNPRGVTLTTQGHQFLLHARRILGAMTEASHSLKAVAQQDQGRLTIGVTTL VAGYYLSEALGRFRRAFPAVQIEVKEDEQPFLEHQIVNGEVDVGILMTNRTIRQEAFD TELLTRSPLRLWLAANHPLCAESTLSLTALGEEPMISLTADQLDQIIGGGLRRYGISP RIVLRTASVEAVRSLVASQLGVALLPDFAYRPWSLEQERVEARPIKEPIPAIDIGLVW RRGSRLDWTAREFIDIARDQSRLRARQALPR" misc_feature 1806424..1806603 /locus_tag="B565_1614" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 1806427..1807317 /locus_tag="B565_1614" /note="DNA-binding transcriptional regulator CynR; Provisional; Region: PRK11242" /db_xref="CDD:183051" misc_feature 1806691..1807290 /locus_tag="B565_1614" /note="The C-terminal substrate-binding domain of putative LysR-type transcriptional regulator PAO1-like, a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_PAO1_like; cd08412" /db_xref="CDD:176104" misc_feature order(1806715..1806717,1806727..1806729,1806856..1806858, 1806916..1806918,1807018..1807020,1807090..1807092, 1807141..1807143) /locus_tag="B565_1614" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176104" misc_feature order(1806721..1806729,1806736..1806741,1806745..1806750, 1806787..1806789,1806793..1806795,1806817..1806819, 1806826..1806828,1807054..1807059,1807075..1807083, 1807087..1807095,1807105..1807110,1807117..1807122, 1807150..1807152,1807171..1807176) /locus_tag="B565_1614" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176104" gene 1807533..1808678 /locus_tag="B565_1615" /db_xref="GeneID:10487532" CDS 1807533..1808678 /locus_tag="B565_1615" /codon_start=1 /transl_table=11 /product="ABC transporter periplasmic substrate-binding protein" /protein_id="YP_004392267.1" /db_xref="GI:330829315" /db_xref="GeneID:10487532" /translation="MKLTPLMLALVPALLAGQTQAAPTELGKGEGQLNIVAWAGYVER GETDKNYDWVTGFEKETGCKVNVKTAATSDEMVALMNEGGFDLVTASGDASLRLIAGG KVQALNLALIPSYSKIDPRLQNAPWHTVDGKHYGVPYQWGGNILMYNTKVFPKAPDSW NVVFEEQTLADGKSNKGRVQAFDGPIHIADAALYLMTHQPVLGIKDPYELNEDQYKAS LDLLRKQRQLVGRYWHDAFVQIDDFKNEGVVASGSWPFQANALIADKQPIATTVPKEG VTGWADTSMVHSDAKNLTCAYKWLEHSLSNKLQGDLAAWFGSVPVVPAACEGNALLGP TGCKTNGIDNFDRVRFWRTPVSQCKSQGTCVPYYRWVSDYIAILGGR" misc_feature 1807593..1808537 /locus_tag="B565_1615" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene 1808822..1809835 /locus_tag="B565_1616" /db_xref="GeneID:10487533" CDS 1808822..1809835 /locus_tag="B565_1616" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="YP_004392268.1" /db_xref="GI:330829316" /db_xref="GeneID:10487533" /translation="MNAVQFDRVSRHYGEVKAVDDISFQIPSGEFFTLLGPSGSGKTT CLRMIAGFEYPSDGEISLFGEPCSTVPPYDRNLNTVFQDYALFPNMDVRDNIGYGLML KGVAKAQRYRKVDEMLELVRLPGVGKRRPSQLSGGQRQRIAIARALINQPRILLLDEP LGALDLKLREQMQLELKALQRQLGITFIFVTHDQQEALSMSDRICIFSQGKIEQIAAP DTIYDAPATPFVARFVGTVNLFEGEQARRLCGDGSQMMVRPERIRLAEAGTPGWSGEI REVEYLGPFVRYRVDLGEQLEIIVNHPNEGQARLARGCRVSLSWPEQAIHRLSGAHQG AQP" misc_feature 1808822..1809805 /locus_tag="B565_1616" /note="ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]; Region: PotA; COG3842" /db_xref="CDD:33633" misc_feature 1808831..1809526 /locus_tag="B565_1616" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 1808927..1808950 /locus_tag="B565_1616" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(1808936..1808941,1808945..1808953,1809065..1809067, 1809293..1809298,1809395..1809397) /locus_tag="B565_1616" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 1809056..1809067 /locus_tag="B565_1616" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 1809221..1809250 /locus_tag="B565_1616" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 1809281..1809298 /locus_tag="B565_1616" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 1809305..1809316 /locus_tag="B565_1616" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 1809383..1809403 /locus_tag="B565_1616" /note="H-loop/switch region; other site" /db_xref="CDD:72971" misc_feature 1809584..1809805 /locus_tag="B565_1616" /note="TOBE domain; Region: TOBE_2; cl01440" /db_xref="CDD:163979" gene 1809832..1810800 /locus_tag="B565_1617" /db_xref="GeneID:10487534" CDS 1809832..1810800 /locus_tag="B565_1617" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="YP_004392269.1" /db_xref="GI:330829317" /db_xref="GeneID:10487534" /translation="MSAPHSASLAMNHQPEPARFRPLRRLSTLLYGRPGLLLAILLGP PLLWLGIIYVGSLLMLLSNSLFGLDEFSGQVRHELGLQNFVALLRPENLDVIGRTVGM SLLVTLACALLGFPVAYYMARYTSGKTRALFYVGIMLPLWSSYLVRVYAWKLILAKEG VVSWLADSMGLEWLLDAILSLPVIGGPSLSFSRLGTFIVFVYVWLPFMILPIQAAVER IPRSLLEASSDLGATPAQTFRNLILPLALPGVVAGSIFTFSLTLGDYIIPGIIGNSTM YIGQVVYMQQGTAGNLPFAAAFSLVPILIIAIYLAIAKRLGAFDAL" misc_feature 1810117..1810734 /locus_tag="B565_1617" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(1810165..1810170,1810177..1810182,1810195..1810197, 1810228..1810239,1810243..1810272,1810279..1810284, 1810288..1810290,1810435..1810440,1810444..1810446, 1810450..1810452,1810459..1810464,1810468..1810470, 1810480..1810485,1810492..1810494,1810543..1810545, 1810585..1810590,1810597..1810599,1810618..1810629, 1810636..1810641,1810678..1810683,1810711..1810716, 1810723..1810728,1810732..1810734) /locus_tag="B565_1617" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(1810246..1810290,1810618..1810635) /locus_tag="B565_1617" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(1810288..1810290,1810381..1810383,1810636..1810638, 1810672..1810674,1810681..1810683,1810711..1810713) /locus_tag="B565_1617" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(1810495..1810533,1810549..1810554,1810564..1810566) /locus_tag="B565_1617" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 1810836..1811663 /locus_tag="B565_1618" /db_xref="GeneID:10487535" CDS 1810836..1811663 /locus_tag="B565_1618" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="YP_004392270.1" /db_xref="GI:330829318" /db_xref="GeneID:10487535" /translation="MSASSVSRQGERPSGLLKYAAIGGLLFLHFPILFIFLYAFTSES KSYQFPPPGLTLKWFEVTLNRPDVWRAIQLSLEVAGLATLAAMILGTLAAGAIARSRF FGQEVVSLLLVLPIALPGIVTGIALRSAYGLMEIPFSFWTIVIGHATFCVVVVYNNAL ARFRRTNQSLIEASMDLGADGFQTLRYVILPNLATALLAGGMLAFALSFDEVIVTTFT AGQQTTLPIWMYQELIRPRDRPVTNVVALIIVAFTTIPILLAYYLTRDTHDVAGSGK" misc_feature 1811049..1811609 /locus_tag="B565_1618" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(1811097..1811102,1811109..1811114,1811127..1811129, 1811157..1811168,1811172..1811201,1811208..1811213, 1811217..1811219,1811280..1811285,1811289..1811291, 1811295..1811297,1811304..1811309,1811313..1811315, 1811325..1811330,1811337..1811339,1811388..1811390, 1811430..1811435,1811442..1811444,1811463..1811474, 1811481..1811486,1811523..1811528,1811559..1811564, 1811571..1811576,1811580..1811585,1811592..1811597, 1811604..1811609) /locus_tag="B565_1618" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(1811175..1811219,1811463..1811480) /locus_tag="B565_1618" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(1811217..1811219,1811265..1811267,1811481..1811483, 1811517..1811519,1811526..1811528,1811559..1811561) /locus_tag="B565_1618" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(1811340..1811378,1811394..1811399,1811409..1811411) /locus_tag="B565_1618" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 1811693..1813123 /locus_tag="B565_1619" /db_xref="GeneID:10487536" CDS 1811693..1813123 /locus_tag="B565_1619" /codon_start=1 /transl_table=11 /product="betaine-aldehyde dehydrogenase protein" /protein_id="YP_004392271.1" /db_xref="GI:330829319" /db_xref="GeneID:10487536" /translation="MKLSTQLLIDGQFVTGEGQAEPILNPANGEQIASVPEASFEQVN RAVNGAQRAFAQWSRTTPAQRSNLLLRLADLVERHAEEFAALESLNCGKPYLAVLNDE LPAVVDCFRFFAGAARCLQGPLAGEYLEGHTSMIRRDPIGVVGSIAPWNYPLMMAAWK MAPVLAAGNTVVLKPSEQTPLTALRLAELASEIFPRGVINVICGRGESVGAPLVEHPL VRMVSLTGDIATGQKILQSAARTMKRTHLELGGKAPVIIFDDADLEAVVAGIRTFGFY NAGQDCTAACRIYAQGKIYDKFVAAMTDAVASIKVGSQYEEGVEMGPLISDRQRNRVA SFVERAQSSGHVEVTAGGKIRPGNGFFFEPTLIVGARQEDEIVRREVFGPVVSVTRFN DAEQVVQWANDSDYGLASSVWTKDLSLASKVASHLQYGCTWINTHFMLTSEMPHGGMK MSGYGKDLSLYALEDYTVPRHIMVKL" misc_feature 1811729..1813108 /locus_tag="B565_1619" /note="Aldehyde dehydrogenase family; Region: Aldedh; pfam00171" /db_xref="CDD:189433" misc_feature 1811759..1813114 /locus_tag="B565_1619" /note="Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like; Region: ALDH_ABALDH-YdcW; cd07092" /db_xref="CDD:143411" misc_feature order(1811873..1811875,1812014..1812016,1812044..1812046, 1812056..1812067,1812071..1812076,1812080..1812082, 1812098..1812103,1812350..1812352,1812386..1812388, 1812395..1812397,1812416..1812418,1812437..1812439, 1812932..1812946,1812953..1812958,1812962..1812964, 1812971..1812973,1812977..1812994,1813019..1813027, 1813040..1813045,1813058..1813060,1813097..1813114) /locus_tag="B565_1619" /note="tetrameric interface [polypeptide binding]; other site" /db_xref="CDD:143411" misc_feature order(1812131..1812136,1812140..1812142,1812212..1812214, 1812218..1812223,1812308..1812310,1812323..1812325, 1812365..1812373,1812380..1812382,1812389..1812391, 1812434..1812436,1812440..1812442,1812536..1812538, 1812677..1812679,1812830..1812832) /locus_tag="B565_1619" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:143411" misc_feature order(1812143..1812145,1812434..1812436,1812527..1812529, 1812536..1812538) /locus_tag="B565_1619" /note="catalytic residues [active]" /db_xref="CDD:143411" misc_feature order(1812533..1812535,1813010..1813012) /locus_tag="B565_1619" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143411" gene 1813277..1814071 /locus_tag="B565_1620" /db_xref="GeneID:10487537" CDS 1813277..1814071 /locus_tag="B565_1620" /codon_start=1 /transl_table=11 /product="Phenylalanine-4-hydroxylase" /protein_id="YP_004392272.1" /db_xref="GI:330829320" /db_xref="GeneID:10487537" /translation="MATFYTAHQPDADGVIHYSNEEHGTWQILIERQFAALAGKGCNE YLAGLDRLGLPRDRIPQLAEINAVLQPATGWSVAAVPALISFDRFFALLANRQFPVAT FIRRRDELDYLQEPDIFHEIFGHCAMLTNPAFAHFTHLYGQLGQQASKDQRVFLARLY WFTVEFGLLATPDGLRIYGGGILSSIGETAYALSGQPLLQPFDLLTVLRTPYRIDIMQ PTYFVLPSLDHLYQLTGEEIMAALAEASRLGLYPPRFEVPAGKQAS" misc_feature 1813298..1813972 /locus_tag="B565_1620" /note="Prokaryotic phenylalanine-4-hydroxylase (pro_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes the eukaryotic proteins, phenylalanine-4-hydroxylase (eu_PheOH)...; Region: pro_PheOH; cd03348" /db_xref="CDD:48244" misc_feature order(1813514..1813516,1813520..1813528,1813532..1813534, 1813541..1813543,1813697..1813699,1813754..1813756) /locus_tag="B565_1620" /note="cofactor binding site; other site" /db_xref="CDD:48244" misc_feature order(1813634..1813636,1813649..1813651,1813769..1813771) /locus_tag="B565_1620" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:48244" gene 1814124..1814462 /locus_tag="B565_1621" /db_xref="GeneID:10487538" CDS 1814124..1814462 /locus_tag="B565_1621" /codon_start=1 /transl_table=11 /product="Pterin-4-alpha-carbinolamine dehydratase superfamily" /protein_id="YP_004392273.1" /db_xref="GI:330829321" /db_xref="GeneID:10487538" /translation="MSELASQQCEACRADAPKVSDEELRELMQLIPDWQPLVEEGALQ LRREFTFRNFKEALAFTNRLGELAEAEFHHPAILTEWGKVTVSWWTHKIGGLHRNDFI MAARTDQLPR" misc_feature 1814220..1814453 /locus_tag="B565_1621" /note="PCD_DCoH: The bifunctional protein pterin-4alpha-carbinolamine dehydratase (PCD), also known as DCoH (dimerization cofactor of hepatocyte nuclear factor-1), is both a transcription activator and a metabolic enzyme. DCoH stimulates gene expression by...; Region: PCD_DCoH_subfamily_a; cd00913" /db_xref="CDD:48349" misc_feature order(1814283..1814285,1814295..1814297,1814343..1814345, 1814352..1814354,1814394..1814396) /locus_tag="B565_1621" /note="aromatic arch; other site" /db_xref="CDD:48349" misc_feature order(1814283..1814288,1814295..1814297,1814307..1814309, 1814328..1814330,1814343..1814345,1814349..1814363) /locus_tag="B565_1621" /note="DCoH dimer interaction site [polypeptide binding]; other site" /db_xref="CDD:48349" misc_feature order(1814286..1814291,1814307..1814312,1814319..1814321, 1814328..1814333) /locus_tag="B565_1621" /note="DCoH /HNF-1 dimer interaction site [polypeptide binding]; other site" /db_xref="CDD:48349" misc_feature order(1814286..1814288,1814307..1814312,1814319..1814321, 1814331..1814333) /locus_tag="B565_1621" /note="DCoH tetramer interaction site [polypeptide binding]; other site" /db_xref="CDD:48349" misc_feature order(1814337..1814345,1814388..1814390,1814394..1814399) /locus_tag="B565_1621" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:48349" gene 1814761..1816308 /locus_tag="B565_1622" /db_xref="GeneID:10487539" CDS 1814761..1816308 /locus_tag="B565_1622" /codon_start=1 /transl_table=11 /product="transcriptional regulatory protein TyrR" /protein_id="YP_004392274.1" /db_xref="GI:330829322" /db_xref="GeneID:10487539" /translation="MRLEVSCEDRLGLTRELLDRLVEHNIDLRGIEIDTSGIIYLNFP ELEFSDFQHLMPEIRRIPGVYDVKTIPYMPSEREHHEIEALLKALPDLVFSLDSKGKV TQANQSALTTLGLPVEEVRGVALGSLVKGFSFTRWLEASEIKPQTCKLSFNGEEYLAD LMPLFVAEARGKQALAGAVVVLKSARRVGLHFSALHAVEVGGFEHLQAESPKMKEVLS QARKLAMQDAPLLIVGETGTGKELLARACHGASLRSSHPFMALNCAAMPDNVAESELF GYAPGAFGNNTEGKRGVLELASGGTLMLDEIGDMSPHLQTKFLRVLQDGVFRRVGDEQ EVKVNVRFICTTQKQLLDLVHEGTFREDLYYRLNVLSLALPPLRERKADIMVLAQQFV SRFASELQRPRPRFTRNMADYLTAYRWPGNVRQLRNCLYRAMTLLEGDELGPEQIDLP VAADTMPLIDEWFEGNLDDAVKRFESQLLARLYPAFPSTRQLAKRLGVSHTAIANKLR EYGISKK" misc_feature 1814761..1816305 /locus_tag="B565_1622" /note="DNA-binding transcriptional regulator TyrR; Provisional; Region: PRK10820" /db_xref="CDD:182758" misc_feature 1814761..1814982 /locus_tag="B565_1622" /note="N-terminal ACT domain of the TyrR protein; Region: ACT_TyrR; cd04877" /db_xref="CDD:153149" misc_feature 1814785..1814790 /locus_tag="B565_1622" /note="putative aromatic amino acid binding site; other site" /db_xref="CDD:153149" misc_feature 1814998..1815180 /locus_tag="B565_1622" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature 1815394..1815864 /locus_tag="B565_1622" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 1815460..1815483 /locus_tag="B565_1622" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(1815463..1815486,1815673..1815675,1815799..1815801) /locus_tag="B565_1622" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 1815661..1815678 /locus_tag="B565_1622" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 1815856..1815858 /locus_tag="B565_1622" /note="arginine finger; other site" /db_xref="CDD:99707" gene 1816498..1817055 /locus_tag="B565_1623" /db_xref="GeneID:10487540" CDS 1816498..1817055 /locus_tag="B565_1623" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392275.1" /db_xref="GI:330829323" /db_xref="GeneID:10487540" /translation="MLLLFSPRLTARLALLLVAFGLLLPRALAETAAESRATAVRELV LDIMSYTRWPTEPAVLRMCVAAPTEYAGALFTIDRQANGRTVQVHRYEASDPAISDHC DVLYLGVLDEPTRIALFARLQGHPVLSISEYNHDCSTSSVFCLQTSPDSVRVRFKVNL DALALSGVRVHPAVLKLAHADKGVP" gene 1817064..1818281 /locus_tag="B565_1624" /db_xref="GeneID:10487541" CDS 1817064..1818281 /locus_tag="B565_1624" /codon_start=1 /transl_table=11 /product="GGDEF domain-containing protein" /protein_id="YP_004392276.1" /db_xref="GI:330829324" /db_xref="GeneID:10487541" /translation="MSAAPRRLTLHQSLGRTHLVAAITAVSVAGLFFTLVALLVVRFY ADHNLELVARAISYSAEAAVVFHDEEAASEALSGIVAKEEVAEATIVLTNGQLLASWE RPRSNPLVTLEDYLAQLLMPGPVKLPMLRGGEQIATIELRGHGEYLLLFLLSALLAMV VCLMLSAMVALYVADRMQVSITAPLRKLALVAHSVRRQRTLGMRAPPADIVEINELGD DFNSLLDELQAWQAQQARENASLLHQATHDALTGLPNRALFEARLAQAISLGEQEGFA LLYLDCDRFKQINDTLGHNAGDDVLIALSRRVQHQLRPDDLVFRLGGDEFAVLVGPLQ RQHEVEEVIGRIQQAMSEPVALRDGRQLVAEVSVGFAVYQAGMSASVLCDQADAAMYL AKRARRSEQQTIA" misc_feature 1817082..1818266 /locus_tag="B565_1624" /note="putative inner membrane diguanylate cyclase; Provisional; Region: PRK09966" /db_xref="CDD:182171" misc_feature 1817799..1818257 /locus_tag="B565_1624" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(1817904..1817906,1818033..1818035) /locus_tag="B565_1624" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(1817919..1817921,1817928..1817933,1817943..1817945, 1817955..1817957,1818021..1818023,1818027..1818038) /locus_tag="B565_1624" /note="active site" /db_xref="CDD:143635" misc_feature order(1818009..1818011,1818096..1818098) /locus_tag="B565_1624" /note="I-site; other site" /db_xref="CDD:143635" gene 1818317..1818805 /locus_tag="B565_1625" /db_xref="GeneID:10487542" CDS 1818317..1818805 /locus_tag="B565_1625" /codon_start=1 /transl_table=11 /product="OmpA family protein" /protein_id="YP_004392277.1" /db_xref="GI:330829325" /db_xref="GeneID:10487542" /translation="MKITHLLKVTLLGLMLSLLAGCQSAPKGLTPEQIAVLKEQGFYL TDEGWTLDLANRVLFANNVGALNPQTRQSVEKLGKTLLGVGLDKARVDGHTDNTGESS YNQQLSLKRAQSVADVLVSVGMKPANLEIHGRGETMPLADNKTREGRAANRRVAIVIS DQ" misc_feature 1818482..1818793 /locus_tag="B565_1625" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature order(1818497..1818502,1818599..1818604,1818611..1818613, 1818623..1818628,1818635..1818637,1818761..1818763, 1818773..1818775) /locus_tag="B565_1625" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene complement(1818901..1819638) /locus_tag="B565_1626" /db_xref="GeneID:10487543" CDS complement(1818901..1819638) /locus_tag="B565_1626" /codon_start=1 /transl_table=11 /product="Excinuclease ABC subunit C" /protein_id="YP_004392278.1" /db_xref="GI:330829326" /db_xref="GeneID:10487543" /translation="MLEWVLDPSAWVALATLTLLEIVLGIDNIIFISILVGRLPEAQR QKARILGLGLAMGTRILLLLSLAWVMRLTDPLFTVLGEAISGRDLILLLGGLFLIGKS AHEIHVTLEGAAEPESVSKAASGFISTLIQIAILDIVFSLDSVITAVGMADHVPVMVL AIMIAVFIMMFAAKSIGDFVDAHPTIKMLALSFLTLVGFALMAEGMDLHIPKGYIYFA MAFSLVVEMINIRLRSHHDNNGQNSAQ" misc_feature complement(1818937..1819638) /locus_tag="B565_1626" /note="Integral membrane protein TerC family; Region: TerC; cl10468" /db_xref="CDD:189213" gene 1819759..1820874 /locus_tag="B565_1627" /db_xref="GeneID:10487544" CDS 1819759..1820874 /locus_tag="B565_1627" /codon_start=1 /transl_table=11 /product="ATP-NAD/AcoX kinase" /protein_id="YP_004392279.1" /db_xref="GI:330829327" /db_xref="GeneID:10487544" /translation="MFRLGFIINPVAGIGGAVGLKGSDGVVAEALARGAVPKAQERAR QALLLLCELNVPFELLTVAGDMGETVARSLGLPCRVIYQPVGESTSADDTRHAAELMR EAGVDLLLFAGGDGTARDICAAVGESCHVLGIPAGCKIHSGVYGVTPAASGRVVARMI AGELLSLIDAEVRDIDEEAFRAGKVRARHYGQLKVPGDLRYVQAVKQGGKESEELVLA DLAAGVVEQMEPDTLYLMGSGSTVAACMAELGLENTLLGVDLVENGRLIGQDLSAAEI LTRIRGRRCRLIITLIGGQGHLFGRGNQQLSPEVIRCVGLDNIQVLATKAKLAALAGR PLLVDTDDPELNRALRGYLRITTGYKDQVIYPVANPE" misc_feature 1819759..1820859 /locus_tag="B565_1627" /note="Diacylglycerol kinase catalytic domain; Region: DAGK_cat; cl01255" /db_xref="CDD:194084" gene 1820974..1821252 /locus_tag="B565_1628" /db_xref="GeneID:10487545" CDS 1820974..1821252 /locus_tag="B565_1628" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392280.1" /db_xref="GI:330829328" /db_xref="GeneID:10487545" /translation="MTIHDFEHKLLGLIDSMVATATDDELFAGGYLRGHISLAVARAE LEGKTLVRDVKSYVLRSLNEAILQGELSEEDEKLVQAMWSRLQQDAEA" misc_feature 1820980..1821237 /locus_tag="B565_1628" /note="YfcL protein; Region: YfcL; pfam08891" /db_xref="CDD:117458" gene 1821351..1823015 /locus_tag="B565_1629" /db_xref="GeneID:10487546" CDS 1821351..1823015 /locus_tag="B565_1629" /codon_start=1 /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_004392281.1" /db_xref="GI:330829329" /db_xref="GeneID:10487546" /translation="MASSSRIANKLPLEMLYHWERQCPDRTYLRQTINREYVDFTWGE VADEARRMVTALRHLGLVAGDKVALLSKNCAQWFIADLAMQMGQYVSVPIYPTANVDT IEYVLRHSEAKAIFVGKLDDWKSQEAGVPADLLRIAFPYDTMPASHQWDDLLEAHEPI PDSPVQAPDSLLSLVYTSGSTGKPKGAMLSVERYAWSCEKLVETVSLSQADRGFSYLP LAHITERVYIYGGSLYGGATIAFPESLDTFIEDVKRCRPTVFISVPRLWAMFRIKIHE KLPQNKLELLLKIPLISGLIKRKLQKGLGLDQARVLGCGSAPVSPALLEWYLSIGLKV TEAWGMTENHAYSTINYPFRADKIGTVGKAGIGVTIKISDEGEILCRCEGMMLGYYKD PEHSAEAIDAEGWLHTGDMGKLDKEGYLTITGRMKDVFKTAKGKYVAPVPIEGLLGQE PIIEQLCVIGYGMPQPIALVQLAESAMKGNREEVNARLEAARVRVNDQLESHAKIRGI LVVKTPWNIENGVLTPTMKIKRHLLEQKYAQVGDRWPSSQVVVWEE" misc_feature 1821351..1823003 /locus_tag="B565_1629" /note="Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]; Region: FAA1; COG1022" /db_xref="CDD:31225" misc_feature 1821468..1822748 /locus_tag="B565_1629" /note="Acyl-protein synthetase, LuxE; Region: LuxE; cl10450" /db_xref="CDD:186997" gene complement(1823128..1824291) /locus_tag="B565_1630" /db_xref="GeneID:10487547" CDS complement(1823128..1824291) /locus_tag="B565_1630" /codon_start=1 /transl_table=11 /product="methionine gamma-lyase" /protein_id="YP_004392282.1" /db_xref="GI:330829330" /db_xref="GeneID:10487547" /translation="MKFKTMSVHSGQLIDPQTGALTTPLYQSSTFSYFNAQAGKDRFA GQAPGFIYSRFGNPTTAELEQKLAALEGADEALVVASGMAAVSAIMYALADSGDEVAY IGPLYGGTDAFLKQTFSRAGIKVTAYESDRDLLANIRPATKVVLFETLTNPTLKVVDP RLVVEAARKVGAITVCDNTFLTPYLLRPLELGVDVVMHSGTKYLGGHGDIIAGVVAGS HALMKSIRTVALKHIGSPIGPQEAYLLQRGVKTLPLRMDAHLHNAQKVAEFLAAHPAV KKVIYPGLASHPGHDALSAFASGFGGMVSIELAGGFERCATLLDNLQLFVQAVSLGDL ESLACHPASTTHAAMDEASRLAAGVNDDLIRFSIGVEDADDLIADLAAALAQI" misc_feature complement(1823179..1824279) /locus_tag="B565_1630" /note="Cys/Met metabolism PLP-dependent enzyme; Region: Cys_Met_Meta_PP; pfam01053" /db_xref="CDD:144590" misc_feature complement(1823179..1824237) /locus_tag="B565_1630" /note="CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of...; Region: CGS_like; cd00614" /db_xref="CDD:99738" misc_feature complement(order(1823332..1823334,1823569..1823574, 1823578..1823580,1823611..1823613,1823659..1823661, 1823665..1823667,1823689..1823691,1823947..1823949, 1823956..1823958,1823971..1823973,1824040..1824045, 1824049..1824054,1824130..1824132,1824136..1824138, 1824193..1824198,1824202..1824213)) /locus_tag="B565_1630" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99738" misc_feature complement(order(1823659..1823661,1823686..1823691, 1823695..1823697,1823761..1823763,1823848..1823850, 1823971..1823973,1824043..1824051)) /locus_tag="B565_1630" /note="substrate-cofactor binding pocket; other site" /db_xref="CDD:99738" misc_feature complement(order(1823686..1823691,1823695..1823697, 1823752..1823754,1823761..1823763,1823971..1823973, 1824043..1824051)) /locus_tag="B565_1630" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99738" misc_feature complement(1823686..1823688) /locus_tag="B565_1630" /note="catalytic residue [active]" /db_xref="CDD:99738" gene complement(1824418..1825455) /locus_tag="B565_1631" /db_xref="GeneID:10487548" CDS complement(1824418..1825455) /locus_tag="B565_1631" /codon_start=1 /transl_table=11 /product="2OG-Fe(II) oxygenase superfamily protein" /protein_id="YP_004392283.1" /db_xref="GI:330829331" /db_xref="GeneID:10487548" /translation="MEHSPLPIIDLAALNGAPEVRRPMLARLAAAARDVGFFYLVGHG LSKVEMLETLALAERFFALPEQEKLAVQMVNSPHFRGYNRVGAELTRQRPDLREQFDI MNEAQALPAAQIRDPWQRLIGPNQWPTALPEMKAHLLAWQERLSDITLTLLAAFAEVL EQPANVFDDSIRGAPYQHMKLIHYPGQEAGGSSQGVGAHKDPGYLTLVMQDNHSGLEV ETADGWISAPPLPGALVVNIGELLELASNGYLKATLHRVVSPPSGVSRLSCAFFMAAR LDATVPLLTLSPALAAQAQGPESDPTNPLFNQVGENVLKGRLRSHPDVAARHYGEPAR LPRTESEAIPA" misc_feature complement(1824484..1825455) /locus_tag="B565_1631" /note="Isopenicillin N synthase and related dioxygenases [General function prediction only]; Region: PcbC; COG3491" /db_xref="CDD:33294" misc_feature complement(1825237..>1825440) /locus_tag="B565_1631" /note="flavanone-3-hydroxylase; Provisional; Region: PLN03176" /db_xref="CDD:178720" misc_feature complement(1824640..1824933) /locus_tag="B565_1631" /note="2OG-Fe(II) oxygenase superfamily; Region: 2OG-FeII_Oxy; cl01206" /db_xref="CDD:194067" gene complement(1825881..1826519) /locus_tag="B565_1632" /db_xref="GeneID:10487549" CDS complement(1825881..1826519) /locus_tag="B565_1632" /codon_start=1 /transl_table=11 /product="YwnB" /protein_id="YP_004392284.1" /db_xref="GI:330829332" /db_xref="GeneID:10487549" /translation="MKIALIGASGFVGSAILNEAISRGHHVTAIVRDVSKVAAHPQVT AMAVDAQNPQALAEVLKGHDRVISAYNPGWTTPDIYDQYLKGANAIVAAAKAANSWLL VVGGAGSLEVAPGVQLVDTPEFPAEWKQGALAARDGLTALRRETTLDWRFVSPPVFLE PGEKRGGYRIGGDQVLFSGEQPAGITAGDLADGVLNEVEKPAHQRQRFTLGY" misc_feature complement(1825890..1826516) /locus_tag="B565_1632" /note="biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs; Region: BVR-B_like_SDR_a; cd05244" /db_xref="CDD:187555" misc_feature complement(order(1826049..1826057,1826115..1826117, 1826202..1826210,1826271..1826276,1826307..1826315, 1826370..1826372,1826412..1826414,1826424..1826426, 1826484..1826495,1826499..1826501)) /locus_tag="B565_1632" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:187555" misc_feature complement(order(1825971..1825973,1826049..1826057, 1826115..1826117,1826124..1826129,1826136..1826138, 1826187..1826189,1826196..1826204,1826298..1826303)) /locus_tag="B565_1632" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187555" misc_feature complement(order(1826115..1826117,1826127..1826129, 1826202..1826204,1826271..1826273)) /locus_tag="B565_1632" /note="putative active site [active]" /db_xref="CDD:187555" gene 1826621..1827511 /locus_tag="B565_1633" /db_xref="GeneID:10487550" CDS 1826621..1827511 /locus_tag="B565_1633" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004392285.1" /db_xref="GI:330829333" /db_xref="GeneID:10487550" /translation="MEQFRRYAIFAAVVEAGSMTGAAKSLGMTPSAVSQHISQLESLL GLPLLHRSTRRLSLTEAGEVVWQGCRALQQTLSETELRLSEVRDALLGEVRITAPVGM AGQPLALALSPLLQAHPGLTIQIIADDEKRDLIAERIDVALRVGTLPDSTLVARKLGQ TRMLLCAAPAYLARKGTPRMPDDLATHDWLCGDMLGNGLLLQDEKGGEHRVRFKAKVL CNNVLPLRQFALAGQGISLQPEGEIGEDLAQGRLLELLPGFRVAPMEIHAITPQREIP EKVRRVVEALRSYFGTTMSS" misc_feature 1826621..1827490 /locus_tag="B565_1633" /note="transcriptional regulator; Provisional; Region: PRK10632" /db_xref="CDD:182601" misc_feature 1826630..>1826737 /locus_tag="B565_1633" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 1826894..1827478 /locus_tag="B565_1633" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(1826924..1826926,1826936..1826938,1827053..1827055, 1827095..1827097,1827101..1827103,1827284..1827286, 1827335..1827337,1827416..1827418) /locus_tag="B565_1633" /note="putative effector binding pocket; other site" /db_xref="CDD:176114" misc_feature order(1826927..1826932,1826942..1826947,1826951..1826956, 1826963..1826965,1826975..1826977,1826981..1827001, 1827182..1827184,1827266..1827280,1827299..1827304, 1827311..1827313) /locus_tag="B565_1633" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene complement(1827636..1828538) /locus_tag="B565_1634" /db_xref="GeneID:10487551" CDS complement(1827636..1828538) /locus_tag="B565_1634" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="YP_004392286.1" /db_xref="GI:330829334" /db_xref="GeneID:10487551" /translation="MSQVDLNLFRVLDAVIRYGGVTTAAEMMEMTPSAISQAISRLTS LVGEPLFVRQGRGITPTARALSLHHEIMVPLHDMERSLQRTDLFDPQTSRRTFRIAGV PDIDIFFLPELNNLLQTQAPNCQLEWNTQVQDEALRQNSLYLHSVDLVLATKPMAEQG IENEQIMSQALRIACRKDHPRIRQAPDMATFFNEKHVVLQTRRLDSLLLNTLTKAPLP PRQIAYESDSLLTALHLVSRTDWLCVASQWHMEKLGQALDLASYPLPWLSEDCPVYMS WHKSSGQDTGLNWLKDQVRAVSSF" misc_feature complement(1827660..1828529) /locus_tag="B565_1634" /note="leucine transcriptional activator; Reviewed; Region: leuO; PRK09508" /db_xref="CDD:181918" misc_feature complement(1828347..1828523) /locus_tag="B565_1634" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(1827648..1828253) /locus_tag="B565_1634" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature complement(order(1827825..1827830,1827834..1827839, 1827855..1827872,1828143..1828151,1828158..1828169, 1828173..1828175,1828185..1828187,1828194..1828199, 1828203..1828208)) /locus_tag="B565_1634" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene complement(1828639..1829898) /locus_tag="B565_1635" /db_xref="GeneID:10487552" CDS complement(1828639..1829898) /locus_tag="B565_1635" /codon_start=1 /transl_table=11 /product="major facilitator superfamily permease" /protein_id="YP_004392287.1" /db_xref="GI:330829335" /db_xref="GeneID:10487552" /translation="MSTLISHQPQSTRWPLVFLAIFAGASGALCLGKVPAVLGILRSE LGLTLVEASYLASAFNTLAILFSLFLGLLLTRWSGRQTGVVGLLVIVTGGALALPATG LAMMLLSRIVEGIGFLLVSVAMPAFIVAVTREEDKRLAISLWAVNLPLGAAAGMLLTP WLTAQGGWRLAWLILMIPQLSALLLLLASRSADGLRVWAPQNLINSGHPLRQLTVLRQ KALWRYGLAFTLYSLMLWALFVWLPTMLQGSPGIGQSQIALLSALAVVANIPGNLMGA WLLRRGVARDRLISWALGLMALCGMLAFWPGLSPWWAYGLCLALSLAGGMAPPAILSS AQGVSQGPVQLAIVQGFFVQLANFGQLLGPLLLAALMTDSGHWGSARRLFLGGLLLVA LLYAAGHLPGSSMAAKQARSHSRQDER" misc_feature complement(1828843..>1829574) /locus_tag="B565_1635" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature complement(order(1828843..1828845,1828852..1828857, 1828891..1828893,1828900..1828905,1828915..1828917, 1828924..1828929,1828936..1828938,1829083..1829085, 1829095..1829097,1829104..1829106,1829116..1829118, 1829128..1829130,1829170..1829172,1829179..1829184, 1829191..1829196,1829203..1829205,1829443..1829445, 1829461..1829466,1829473..1829478,1829512..1829514, 1829521..1829526,1829533..1829538,1829545..1829550)) /locus_tag="B565_1635" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene complement(1829895..1830794) /locus_tag="B565_1636" /db_xref="GeneID:10487553" CDS complement(1829895..1830794) /locus_tag="B565_1636" /codon_start=1 /transl_table=11 /product="Pirin-like protein" /protein_id="YP_004392288.1" /db_xref="GI:330829336" /db_xref="GeneID:10487553" /translation="MTRRLNLSAPVKGQPLRIGSGFEAHHFGEHFFNGLIDPVVMVDH FQMTAPTFEPHPHAGISAVTYLFEDSTSPHVNYDSLGNQGPIEPGALHWLAAGRGAVH TEQPEGASPYVHALQIFVNLPARQKMASPFAVHAAAATIPEFHGEGVRVRVVAGHSNG ITAPHSVELPQPFTLLDGHCAPSSRFTHLLAAGWNAMIYPLTGSLTLQAEGERHLIPA GHGMGVSLSADGGEAVALQLEATEPCHFVLLSGQALNEPLVKHGPFVMNSHDAIADRL HAYQRGEFGQLNDEWLRNGQYRP" misc_feature complement(1830435..1830692) /locus_tag="B565_1636" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" misc_feature complement(1829940..1830269) /locus_tag="B565_1636" /note="Pirin C-terminal cupin domain; Region: Pirin_C; pfam05726" /db_xref="CDD:147724" gene complement(1830853..1831590) /locus_tag="B565_1637" /db_xref="GeneID:10487554" CDS complement(1830853..1831590) /locus_tag="B565_1637" /codon_start=1 /transl_table=11 /product="isochorismatase family protein" /protein_id="YP_004392289.1" /db_xref="GI:330829337" /db_xref="GeneID:10487554" /translation="MKLRQICSATLLGLATLTATLATTATPAMAADAASHPTVSPNRY LEMLSRDNAVLLLVDHQVGLLSGVRDTTVGELKHNVVALANAARAHGVPVIVTATMPD GMWGPTMPELTSALPDVKVINRTVINAWDDPAVRAAIEKTGRKQLIIAGVSLEICASF PALSAKAAGYDARVVLDASGTFNEAKRTTGLQRLLGAGIPVTDYASAAVEMLRSNVDP KAHDVYSALDMPFATLVWQMQEGAKKS" misc_feature complement(1830982..1831434) /locus_tag="B565_1637" /note="Isochorismatase family; Region: Isochorismatase; pfam00857" /db_xref="CDD:189743" misc_feature complement(1830952..1831431) /locus_tag="B565_1637" /note="YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them...; Region: YcaC_related; cd01012" /db_xref="CDD:29550" misc_feature complement(order(1831120..1831122,1831219..1831221, 1831414..1831416)) /locus_tag="B565_1637" /note="catalytic triad [active]" /db_xref="CDD:29550" misc_feature complement(order(1831258..1831260,1831396..1831398, 1831405..1831407)) /locus_tag="B565_1637" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29550" misc_feature complement(1831132..1831137) /locus_tag="B565_1637" /note="conserved cis-peptide bond; other site" /db_xref="CDD:29550" gene 1831783..1832718 /locus_tag="B565_1638" /db_xref="GeneID:10487555" CDS 1831783..1832718 /locus_tag="B565_1638" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulatory protein" /protein_id="YP_004392290.1" /db_xref="GI:330829338" /db_xref="GeneID:10487555" /translation="MTPLELDLNDLYLFTHVVQRQGFTAAARALGVPKSRISRRIRLL EERLDTRLLQRTSRQLSLTDAGEVLYRHCQAMLAEAQAGEAAVRQRQQEPSGLVRISV PITMADALLAPLLPAFMAQYPKVRLAVQASNRQVDLLEEGLDVVIRGVAFEQAPSSLV QVPLCTVQWGVLATPAWLSRHNALAHPRQLEGEDALLFSSLERQADLLWLRHDSGESE EVAVNVLLRSDNVQTLKQAALAGLGMVGLPLYACVNELADGRLQQLLPEWRPKDGKLV MLYPARRGLSPAVRALIDFIKAQLPALLAEVGQPR" misc_feature 1831801..1832670 /locus_tag="B565_1638" /note="LysR family transcriptional regulator; Provisional; Region: PRK14997" /db_xref="CDD:184959" misc_feature 1832068..1832670 /locus_tag="B565_1638" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(1832098..1832100,1832110..1832112,1832233..1832235, 1832275..1832277,1832281..1832283,1832473..1832475, 1832524..1832526,1832605..1832607) /locus_tag="B565_1638" /note="putative effector binding pocket; other site" /db_xref="CDD:176114" misc_feature order(1832101..1832106,1832116..1832121,1832125..1832130, 1832137..1832139,1832149..1832151,1832155..1832175, 1832362..1832364,1832455..1832469,1832488..1832493, 1832500..1832502) /locus_tag="B565_1638" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene complement(1832725..1833633) /locus_tag="B565_1639" /db_xref="GeneID:10487556" CDS complement(1832725..1833633) /locus_tag="B565_1639" /codon_start=1 /transl_table=11 /product="HTH-type transcriptional regulator MetR" /protein_id="YP_004392291.1" /db_xref="GI:330829339" /db_xref="GeneID:10487556" /translation="MAVPSNAGIEIKHLKTLTALAEQGSLAGAALTLNLTQSALSHQL KELETRLNLELYLRKSRPLVLTAAGSQLLALARQVLPALAQTEKQLQALQSGDAGRLH LALDCHSCIQWLLPLLPDFRRQWPGVDLEVESVPGFDAINALLGGQLDLLLTSDVQAR GDLHFEPLFAFDLTLVMAPDHPLCHQSRIEPGDLGPEVLLVYPVERSRMDIFSRFLQP AGVEPARCKPVDNTSVMLQMAAAGLGVAALPRWASDEFVRQGMLCARPLGSGIRRHMY GAVRAADRDQACLQSLFERIRRKMEG" misc_feature complement(1832731..1833609) /locus_tag="B565_1639" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature complement(1833427..1833603) /locus_tag="B565_1639" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(1832746..1833336) /locus_tag="B565_1639" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator metR, which regulates the expression of methionine biosynthetic genes, contains type 2 periplasmic binding fold; Region: PBP2_MetR; cd08441" /db_xref="CDD:176132" misc_feature complement(order(1832911..1832916,1832920..1832925, 1832941..1832958,1833232..1833252,1833256..1833258, 1833268..1833270,1833277..1833282,1833286..1833291)) /locus_tag="B565_1639" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176132" gene 1833918..1836182 /locus_tag="B565_1640" /db_xref="GeneID:10487557" CDS 1833918..1836182 /locus_tag="B565_1640" /codon_start=1 /transl_table=11 /product="5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase" /protein_id="YP_004392292.1" /db_xref="GI:330829340" /db_xref="GeneID:10487557" /translation="MTRAHTLGFPRIGAKRELKFALESYWRGETTQAELVSVGKTLRE RHWQAQHGAGVNLLPVGDFAWYDQVLGTSLLVDAVPARHRHGETDLDTLFRVARGRAP TGPAAAAAEMTKWFNTNYHYLVPEFSRDQRFKLGWSQLFDEVEEAKALGLPVKAVLLG PVSYLWLGKEKESGFSRLELLDRLLIVYQEILAKLAVQGVEWVQIDEPALTLDLPDEW RLAYLNAYERLAGPCKLLLTTYFGSVAHQRDIITSLKVDGLHLDLVAAPEQLETLVPH LPAQWVISAGVINGRNVWRANLAKLAPTLKALKAKLGERLWVASSCSLLHSPVDLTLE QELDPQTRSWFAFALQKCFELGLLREYLDGGELDKITAYSQPIVDRESDSRVHKKAVQ SRLASLTNSDFDRHSPYPVRAELQRSDLKLPLLPTTTIGSFPQTSQIRVLRQDWRAGR IDDSAYEAGIQAEIRDAIARQEAIGLDVLVHGEAERNDMVEYFGELLDGFAITRFGWV QSYGSRCVKPPVITRDIDRPTPMTLEWTRFAQSLTDKPVKGMLTGPVTILCWSFPRED VSREQSALQIGLAIRDEVADLEAAGIKIIQIDEPAIREGLPLRKQDHQAYLDWAVRAF RLSASPVADSTQIHTHMCYSDFNLIIEAVAALDADVITIETSRSQMQLLEAFERFNYP NEIGPGVYDIHSPNVPSQSWIEGLLRKAAKQIPAERLWVNPDCGLKTRGWEETEAALK VMVDATKALRAELA" misc_feature 1833918..1836179 /locus_tag="B565_1640" /note="5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional; Region: PRK05222" /db_xref="CDD:179966" misc_feature 1833924..1834997 /locus_tag="B565_1640" /note="N-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by...; Region: CIMS_N_terminal_like; cd03312" /db_xref="CDD:48147" misc_feature order(1833963..1833965,1833972..1833974,1834257..1834259, 1834272..1834274,1834278..1834280) /locus_tag="B565_1640" /note="THF binding site; other site" /db_xref="CDD:48147" misc_feature 1835193..1836158 /locus_tag="B565_1640" /note="C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by...; Region: CIMS_C_terminal_like; cd03311" /db_xref="CDD:48146" misc_feature order(1835205..1835213,1835364..1835366,1835382..1835384, 1835703..1835705,1835709..1835711,1835835..1835837, 1835841..1835843,1836090..1836095) /locus_tag="B565_1640" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:48146" misc_feature order(1835457..1835465,1835595..1835597,1835715..1835717) /locus_tag="B565_1640" /note="THF binding site; other site" /db_xref="CDD:48146" misc_feature order(1835835..1835837,1835841..1835843,1835907..1835909, 1836090..1836092) /locus_tag="B565_1640" /note="zinc-binding site [ion binding]; other site" /db_xref="CDD:48146" gene 1836358..1837107 /locus_tag="B565_1641" /db_xref="GeneID:10487558" CDS 1836358..1837107 /locus_tag="B565_1641" /codon_start=1 /transl_table=11 /product="ABC transporter periplasmic binding protein" /protein_id="YP_004392293.1" /db_xref="GI:330829341" /db_xref="GeneID:10487558" /translation="MRVSLGSAILWGLLMWQSVWAAPAAELKLVYFDDFAPYSWRDEQ GKMRGLMIDVMERVAAHMGLRVRHEGYPWQRAQKMVRMAQADGFVTIATRERRSYTLI VEEPVTTTVLTIFTQRAHPRMAEFQRASRLSDFKSLTFLDYFGNGWGKENLAGFTVHH TINVDNVFKMLAAGRGDLMVTDPLVARFKLNQLGLSGQVVEVPLQLASTPFNLCIGKH SRFNTRITEFNRALQQLRQSGELARIVERYR" misc_feature 1836436..1837101 /locus_tag="B565_1641" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature 1836436..1837101 /locus_tag="B565_1641" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature order(1836460..1836462,1836574..1836576,1836643..1836645, 1836772..1836774,1836901..1836903) /locus_tag="B565_1641" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(1836850..1836852,1836862..1836864,1836880..1836882) /locus_tag="B565_1641" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 1836976..1836993 /locus_tag="B565_1641" /note="hinge residues; other site" /db_xref="CDD:29040" gene complement(1837144..1838007) /locus_tag="B565_1642" /db_xref="GeneID:10487559" CDS complement(1837144..1838007) /locus_tag="B565_1642" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="YP_004392294.1" /db_xref="GI:330829342" /db_xref="GeneID:10487559" /translation="MELRDLKAFVTLGEVLHFGQAAVRQHVTQSALSKQIRRLEEELG GELFERNASTTRLTGLGRALYEDARAVVIQSEQLSRTARDVLAGNVGTLRIGFGVATK ILVPAAIARFRAERPQVTIELNDLSTHHQLLALSEGKLDLGFCRLPAPKGWHALPVVE AHFVAVLPASYCGVRELADLVDKPLAILRRDKAPSFYDHLMNYLAQSGLRFRDIQYVN DFAAGVATAAAEIAWTLVPSSTTIEHPDVLTLPLRDGEACWTIGLIRPPHSKGPLIDA FWATIADMTPR" misc_feature complement(1837159..1838007) /locus_tag="B565_1642" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature complement(1837822..1838001) /locus_tag="B565_1642" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(1837165..1837734) /locus_tag="B565_1642" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold; Region: PBP2_LTTR_aromatics_like; cd08414" /db_xref="CDD:176106" misc_feature complement(order(1837270..1837272,1837321..1837326, 1837330..1837335,1837351..1837356,1837411..1837416, 1837504..1837506,1837633..1837635,1837639..1837641, 1837645..1837647,1837669..1837671,1837678..1837683, 1837687..1837692,1837699..1837701,1837717..1837719)) /locus_tag="B565_1642" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176106" misc_feature complement(order(1837420..1837422,1837441..1837446, 1837570..1837572)) /locus_tag="B565_1642" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176106" gene 1838175..1839608 /locus_tag="B565_1643" /db_xref="GeneID:10487560" CDS 1838175..1839608 /locus_tag="B565_1643" /codon_start=1 /transl_table=11 /product="Aryl-phospho-beta-D-glucosidase BglC" /protein_id="YP_004392295.1" /db_xref="GI:330829343" /db_xref="GeneID:10487560" /translation="MHHHKFNDFPSDFLWGAASAAYQVEGGWNADGKGPSVWDLFTKL PGKTFEGSNGDVAVDHYHRMEEDVALMAEMGVKAYRFSVSWPRIYPTGRGEVNEAGLA FYEKLIDTLLAHQIEPVLTLYHWDLPQALQDEYGGWEDRRIIEDFERYCVTLYQRFAG KVKYWVSLNEQNYNLTNAYQLGTHPPAVQDRKRFFAANHIAFLANARVIKAFRQHVPN GLIGPSFAYSPAYPASCDPKDMLAYENAEEFNNLWWLDAYCFGRYPQAALAYLRENGE APEILPGDMELLREGTPDYMGVNYYYTLTYTDNPLGGQTLQRINTTGKKGTTPSSGIP GLYKTAPNPHLETSNWDWAIDPTGMRIALRRLSSRYGLPLMITENGLGEFDKLEAGDK VNDEYRIDYLRSHVKACQEAMQDGVELLGYCAWSFTDILSWLNGYQKRYGFVYVERDE QGGSLRRIKKASFHWYSQVIASQGKQL" misc_feature 1838199..1839599 /locus_tag="B565_1643" /note="Glycosyl hydrolase family 1; Region: Glyco_hydro_1; cl01046" /db_xref="CDD:186308" gene 1839802..1841562 /locus_tag="B565_1644" /db_xref="GeneID:10487561" CDS 1839802..1841562 /locus_tag="B565_1644" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit A" /protein_id="YP_004392296.1" /db_xref="GI:330829344" /db_xref="GeneID:10487561" /translation="MTDHTFIPGKDAALEDSIERFQTKLQALGFDIEEASWLNPVPNV WSVHIRDKECALCFTNGKGASKKAALASALGEYFERLSTNYFFADFYLGEQVANGDFV HYPNEKWFPIEGDQFPAGLLDSFTRKFYNPDGEVTADMLVDLQSNNEERGIVALPFER QSDHETVYIPMNIIGNLYVSNGMSAGNTKTEARTQALSEVFERHVKNKIIAEAISLPL IPDEVIARYPGIAASIAALEAEGFPIYSFDASLGGRYPVICVVLLNPSNGTCFASFGA HPRFEVAFERTVTELLQGRGLKDLDVFVPPSFDNEQVADHHNLETHFIDSSGLISWDL FKQDADFEFADWDFRGTSQEEFDHLIGIFHELEQPVYIADYEHLGVYACRILVPGMSD IYPAEDLLLANNNMGANLREVILALPSLDWDAEQYMALFDQLDEEGHDERTRVRELLG IAAAKGTALHTLRVGELKAMLALAAGELETALDLIDWTMEFNQSVFTAERASYYRALR ACVELFLDEERDPEQYRAVFTRMYGEETLAQAWANATGEARFHGLEAADLSLSQFPLH QKLLAAYEKLQKAKRAHHWA" misc_feature 1839835..1840995 /locus_tag="B565_1644" /note="YcaO-like family; Region: YcaO; cl09146" /db_xref="CDD:195805" gene complement(1841632..1841823) /locus_tag="B565_1645" /db_xref="GeneID:10487562" CDS complement(1841632..1841823) /locus_tag="B565_1645" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392297.1" /db_xref="GI:330829345" /db_xref="GeneID:10487562" /translation="MATPLYTRYQLKQKYHIFNAMILKNLFPIMEIWYWQDIFADRQH IPCPVINPLRGIFCFLFHL" gene 1841944..1842792 /locus_tag="B565_1646" /db_xref="GeneID:10487563" CDS 1841944..1842792 /locus_tag="B565_1646" /codon_start=1 /transl_table=11 /product="formate transporter 1 FocA" /protein_id="YP_004392298.1" /db_xref="GI:330829346" /db_xref="GeneID:10487563" /translation="MKAESPFDCLKPEAIAALAEDITYAKATKPAYKVIPLAITAGAF IAIAFIFYITVTTGTGSMPWGMAKLVGGLCFSLGLILCVLLGAELFTSTTLTLVAKAA NRISWAQLLKNWGLVYFGNLIGGLLMVALIIVSAEYTAADGQWGLNALKVAQHKIHHT FFEAVALGILCNLMVCLAAWMAFGARSATDKVVVMLLPVAMFVASGFEHSIANMFMIP VGIAIHSVASPEFWQAIGQDPATFADLTVSNFVLHNLIPVTIGNIIGGGVMVGLTYWF IFRRHH" misc_feature 1841983..1842780 /locus_tag="B565_1646" /note="Formate/nitrite transporter; Region: Form_Nir_trans; cl00927" /db_xref="CDD:193975" gene 1842839..1845121 /locus_tag="B565_1647" /db_xref="GeneID:10487564" CDS 1842839..1845121 /locus_tag="B565_1647" /codon_start=1 /transl_table=11 /product="formate acetyltransferase 1" /protein_id="YP_004392299.1" /db_xref="GI:330829347" /db_xref="GeneID:10487564" /translation="MAELNEQFQKAWEGFAAGEWQTSVNTRDFIQKNYTPYEGDESFL AGATEATTKLWDKVMEGIKIENRTHAPVDFDTDLPSTITAHDAGYIDQSLEQIVGLQT DKPLKRAIIANGGIKMVKTSCEVYGRQLDPMVEKIFTEYRKTHNQGVFDVYTKDILNC RKSGVITGLPDAYGRGRIIGDYRRVALYGVDFLMADKLAQFKSLQADLENGVNLEATI RLREEISEQHRALAQMKVMAAKYGCDISVPAKNAKEAVQWTYFAYLAAVKSQNGAAMS FGRTSSFLDIYIERDLQKGLITEQEAQELMDHMVMKLRMVRFLRTPEYDSLFSGDPMW ATETLAGMGVDGRTLVTKNSFRMLNTLYTMGPSPEPNLTILWSEKLPVGFKKYCAKVS IETSSVQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG MDEKLKIQVGPKTEMVKSEYLDYNDVMDRLDHFMDWLAKQYVAALNIIHYMHDKYSYE ASLMALHDRDVYRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGVAIDFEIEGEYPQ FGNNDARVDDIACDLVERFMKKIQKLNTYRGAVATQSVLTITSNVVYGKKTGNTPDGR RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDMEAQ KANLAGLMDGYFHHESNVEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRF NSLTKEQQQDVITRTFTASL" misc_feature 1842869..1845118 /locus_tag="B565_1647" /note="formate acetyltransferase 1; Region: pyr_form_ly_1; TIGR01255" /db_xref="CDD:162272" misc_feature 1842869..1845106 /locus_tag="B565_1647" /note="Pyruvate formate lyase 1; Region: PFL1; cd01678" /db_xref="CDD:153087" misc_feature order(1843187..1843192,1843274..1843279,1843286..1843291, 1843295..1843297,1843310..1843312,1843319..1843324) /locus_tag="B565_1647" /note="coenzyme A binding site [chemical binding]; other site" /db_xref="CDD:153087" misc_feature order(1843367..1843369,1843655..1843660,1843820..1843822, 1843838..1843840,1844093..1844095,1844135..1844137, 1844144..1844146,1844651..1844653,1844657..1844659) /locus_tag="B565_1647" /note="active site" /db_xref="CDD:153087" misc_feature order(1844093..1844098,1845041..1845043) /locus_tag="B565_1647" /note="catalytic residues [active]" /db_xref="CDD:153087" misc_feature 1845032..1845046 /locus_tag="B565_1647" /note="glycine loop; other site" /db_xref="CDD:153087" gene complement(1845634..1846062) /locus_tag="B565_1648" /db_xref="GeneID:10487565" CDS complement(1845634..1846062) /locus_tag="B565_1648" /codon_start=1 /transl_table=11 /product="YcgN" /protein_id="YP_004392300.1" /db_xref="GI:330829348" /db_xref="GeneID:10487565" /translation="MMQAPFWQTKSLQQMTESEWESLCDGCGKCCLNKLIDEDTDELV FTNVACNLLNTKTCQCSDYANRFKKEPDCLQITHDKIAEYDWLPSTCAYRLLSEGDAL PEWHPLLTGSRSAMHQAGQSVRGKVIHEDQAGEWIDHIIT" misc_feature complement(1845637..1846062) /locus_tag="B565_1648" /note="Flagellin N-methylase; Region: FliB; cl00497" /db_xref="CDD:186037" gene complement(1846472..1846957) /locus_tag="B565_1649" /db_xref="GeneID:10487566" CDS complement(1846472..1846957) /locus_tag="B565_1649" /codon_start=1 /transl_table=11 /product="putative cell division inhibitor" /protein_id="YP_004392301.1" /db_xref="GI:330829349" /db_xref="GeneID:10487566" /translation="MNQPLHSLPFAMNRVMSKPWPTRTACKAELAHYGAIIQSDDQFL SELTKLGEAHTGWILLIAPPGRPTVSRLEERGIDPKRVLVVHSPKIKNWQQTLERSLG NGHCAAVFTWLPEQIELDHVKLQRLGQQSGVLTRFFGAKRTNLGTPLLAYSEQDIYLN H" misc_feature complement(1846550..>1846819) /locus_tag="B565_1649" /note="Cell division inhibitor SulA; Region: SulA; cl01880" /db_xref="CDD:186485" gene 1847188..1847385 /locus_tag="B565_1650" /db_xref="GeneID:10487567" CDS 1847188..1847385 /locus_tag="B565_1650" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392302.1" /db_xref="GI:330829350" /db_xref="GeneID:10487567" /translation="MDISTLQRLDANILLGIINEKLRLECDGLEELLAYYDMSEEQLA GRLDQIGYHYDPLSNQFKAHL" gene 1847457..1847627 /locus_tag="B565_1651" /db_xref="GeneID:10487568" CDS 1847457..1847627 /locus_tag="B565_1651" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392303.1" /db_xref="GI:330829351" /db_xref="GeneID:10487568" /translation="MLPIFMDFQGLAISENLFMPEYFYCFIKLLIIKVIFIYARSIKG KGFQAFQAVFIG" gene 1847761..1850235 /locus_tag="B565_1652" /db_xref="GeneID:10487569" CDS 1847761..1850235 /locus_tag="B565_1652" /codon_start=1 /transl_table=11 /product="phosphorylase" /protein_id="YP_004392304.1" /db_xref="GI:330829352" /db_xref="GeneID:10487569" /translation="MATKKKTDQDLQLDKDQLKASIVRHLRSTLGTSEQKASPEAWWK ATAAAVNEQVYERLTRTQQTHFKKDTRAIHYLSAEFLMGRLTSNNLHNLSLYKTCEEA LGELGLELTDLCEQEPDMALGNGGLGRLAACFIDSLATLNYPAVGYGIHYEHGLFRQE IQDGRQIERPDSWREYGNPWEICRPESVQEVPLYGYVETVFGDNGGLKKVWHAGRKIK GVPWDIPVVGFGGHTVNILRLWESRASEFFDWDVFNAGGYIDSQAEKAQAETISKVLY PNDETDAGKELRLIQQYFFCACSIKDIMRRYKRVHGSDFSNFAAQIAIQLNDTHPTVA IPELMRVLVDEEDLNWDAAWAICYQVFSYTNHTLLPEALEKWSVSLFEKVLPRHLEVI YEINARFLNELVEPKWPGNDAIKAKLSIIEEGDVRKVRMGNLCVIGSSKVNGVAEIHS KLVKEDLFPEYAELWPEKMCNVTNGVTPRRWLLACNPELAGLYNEVVGKEWPLQLDKL RGVVKFADDKAFQQQFMTIKRHNKEKLLKVIKDETGIDVSAEAIFDVQIKRLHEYKRQ QLNLIHIMALYRRLLANPDYDMHPRVFIFGSKAAPGYKLAKDIIYAINKLADRVNNDA RIQGKLKVVFMPNYRVSLAEKLIPAADVSEQISTAGYEASGTGNMKMALNGAITIGTL DGANIEIAEEAGAENCAIFGLNVDEVKSLKARGYNPYDFYYANSELKAVLDWFDTDYF TPGRPGELASIKRSLLEGGDPYLTLADFQSYSDAHKLIDTWYRDPALWAKKAIINSAT MGKFNSDRSIQDYVDRIWDLKACNIG" misc_feature 1847818..1850214 /locus_tag="B565_1652" /note="This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of...; Region: GT1_Glycogen_Phosphorylase; cd04300" /db_xref="CDD:99996" misc_feature order(1847821..1847823,1847827..1847832,1847836..1847844, 1847911..1847919,1848310..1848312,1848592..1848594, 1848601..1848603) /locus_tag="B565_1652" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99996" misc_feature 1847824..1850214 /locus_tag="B565_1652" /note="glycogen/starch/alpha-glucan phosphorylases; Region: P_ylase; TIGR02093" /db_xref="CDD:162698" misc_feature order(1847995..1847997,1848001..1848003,1848133..1848141, 1848586..1848588,1848595..1848597,1848601..1848603, 1848622..1848624,1848742..1848744,1848748..1848750, 1848856..1848861,1848871..1848873,1849180..1849182, 1849201..1849203,1849432..1849437,1849441..1849452, 1849552..1849554,1849567..1849569,1849573..1849575, 1849675..1849680,1849744..1849746,1849750..1849761, 1849768..1849770) /locus_tag="B565_1652" /note="active site pocket [active]" /db_xref="CDD:99996" gene complement(1850299..1851591) /locus_tag="B565_1653" /db_xref="GeneID:10487570" CDS complement(1850299..1851591) /locus_tag="B565_1653" /codon_start=1 /transl_table=11 /product="Anion transporter" /protein_id="YP_004392305.1" /db_xref="GI:330829353" /db_xref="GeneID:10487570" /translation="MLAWLPFDPMVNKGLGILVFIAILWLTEALHVTITALLVPLLAT VLGVFDMSKSLTDFANPILFLFFGGFALAAALSKQGLDTLMAGKVMHLANGHLGWGVI LLFTITAAMSMWISNTATTAMMLPLAIGMLARLDSKKERATFVFVLLGIAYSASIGGI GTLVGSPPNAIAAAQMGIGFTDWMKFGVPVVLILMPCGIALLYLVTRPRLSHRVEIQD VTINWTRERKVTLAIFLTTVVLWIGSQPISNAFGGIPQLDTLIAMGAIVAIVVSRVAS WDDVNQNTDWGVLMLFGGGLTLSAILKATGTSAFLASHLSAVLSNANIFVVLLMLAAF VVFLTELVSNTATAALLVPLFAGVAEALGVSPVVMSVLIAIGASCAFMLPVATPPNAI VFASGHIRQREMMKAGMALNVVFTVLLALLAYFVGDIL" misc_feature complement(1850311..1851549) /locus_tag="B565_1653" /note="Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is...; Region: SLC13_permease; cd01115" /db_xref="CDD:73247" misc_feature complement(1850314..1851549) /locus_tag="B565_1653" /note="Di- and tricarboxylate transporters [Inorganic ion transport and metabolism]; Region: CitT; COG0471" /db_xref="CDD:30819" misc_feature complement(order(1850329..1850367,1850455..1850514, 1850566..1850613,1850686..1850742,1850788..1850832, 1850866..1850904,1850980..1851024,1851088..1851153, 1851169..1851174,1851184..1851237,1851241..1851291, 1851361..1851414,1851457..1851498,1851517..1851528)) /locus_tag="B565_1653" /note="transmembrane helices; other site" /db_xref="CDD:73247" gene complement(1851843..1852277) /locus_tag="B565_1654" /db_xref="GeneID:10487571" CDS complement(1851843..1852277) /locus_tag="B565_1654" /codon_start=1 /transl_table=11 /product="thiol-disulfide isomerase and thioredoxins" /protein_id="YP_004392306.1" /db_xref="GI:330829354" /db_xref="GeneID:10487571" /translation="MSFITTYCSHCFTRNRLPVTHIDTSAKCGRCKALLFSQTPCLGN ADNFDTLINSDIPVVVDFWASWCGPCQQFAPVFHEVAHELEPRMRFAKVDTEQQSTIA ARYAIRSIPTLMVFQQGKLVNQINGSLPKSMFKQWLEQFMDV" misc_feature complement(1851858..1852268) /locus_tag="B565_1654" /note="thioredoxin 2; Provisional; Region: PRK10996" /db_xref="CDD:182889" misc_feature complement(1851861..1852142) /locus_tag="B565_1654" /note="TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox...; Region: TRX_family; cd02947" /db_xref="CDD:48496" misc_feature complement(order(1852068..1852070,1852077..1852079)) /locus_tag="B565_1654" /note="catalytic residues [active]" /db_xref="CDD:48496" gene complement(1852295..1852480) /locus_tag="B565_1655" /db_xref="GeneID:10487572" CDS complement(1852295..1852480) /locus_tag="B565_1655" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392307.1" /db_xref="GI:330829355" /db_xref="GeneID:10487572" /translation="MILYSSRLDSHLVVAELSGQAMNPGGIIHSRWALCYRYCSDISL LFRDCFILAFHHIPGQS" gene 1852495..1855269 /locus_tag="B565_1656" /db_xref="GeneID:10487573" CDS 1852495..1855269 /locus_tag="B565_1656" /codon_start=1 /transl_table=11 /product="two-component system hybrid sensor histidine kinase/response regulator" /protein_id="YP_004392308.1" /db_xref="GI:330829356" /db_xref="GeneID:10487573" /translation="MPGLIVALLLAFSGYCWQSLSQQQQAHNLNEAAEVVLNRINADT LYLLGREQANDSNVQQRLNQLSITLDGFVREVRSDPELVQDALSQALLEDMDTYLMAL ARLHAIEMAIEYLNAPLQAQIKKVRGISPSDSALHRDLEELAQLSNYLQRSWDKREQT TLDQLQQQLQSRYGNLPEIATLIRLSKEMSQQVIAYHTLRYQLIDMHVIESLVRWKLD KLERASSLMNRFYLMVLCGALICFALVAFTLWRRNQKLSELSRQTGLLAQAKSDFLAN MSHEIRTPMNAIIGFSSLALQTELDQQQRDYLGKIKSSSDTLLLLINDILDLTKVESG KLTLEEIDFDLSEQLDSLAGMFADLAERKHVEVVIRKSPEVPVFLRGDPLRLGQVLVN LVNNAIKFTERGEVEVCIELANPHPMRIRFSVRDTGIGIAEEKQTQLFQAFTQLEAGN TRKYGGSGLGLNISQRLVELMGGRITVESKPGVGSLFKFDIPMAQAVYGVAGRKVFFE NQPLVMVMDDNELVLDLARDILTRAGVRVLPVNSLSRARQLLREEGPNLRLAILDWRM GQEDGLDLALEMYQHSQWRRIPILMISAWAREGLHARMDSMGLTHFLPKPMTENALLA KVDELLNGSSYELNLRKAEAQGDQQHFKSLLQGTRVLLAEDNRVNQQLIIEYLRRVDA VVCVVSNGREAVERVAEQPFDVILMDLQMPVLDGLDATRQIRKMVDKHDVPIIALTAS AMPGDKERCLGVGMNGYVTKPVSKLDLYNNLLQWVKPQGVEQAGIMEVKPPDMIGILD LQDALKRLEQDKEALQILFKLFMSEHKDDLWEIRSALRRQQPEVASKLLHTLKGVSAN ISAARLQLVAGELEWRLRQNEVLSETDLEQLQQVFSQTREEVSHFLLTGEQHENSYNP YSSGDDRMSQ" misc_feature 1853296..>1853430 /locus_tag="B565_1656" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature order(1853311..1853313,1853323..1853325,1853335..1853337, 1853344..1853346,1853356..1853358,1853365..1853367, 1853413..1853415,1853425..1853427) /locus_tag="B565_1656" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature 1853329..1853331 /locus_tag="B565_1656" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature 1853650..1853967 /locus_tag="B565_1656" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(1853668..1853670,1853680..1853682,1853689..1853691, 1853764..1853766,1853770..1853772,1853776..1853778, 1853782..1853787,1853866..1853877,1853923..1853925, 1853929..1853931,1853944..1853949,1853953..1853955) /locus_tag="B565_1656" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 1853680..1853682 /locus_tag="B565_1656" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(1853776..1853778,1853782..1853784,1853866..1853868, 1853872..1853874) /locus_tag="B565_1656" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature 1854031..1854375 /locus_tag="B565_1656" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature 1854034..1854384 /locus_tag="B565_1656" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(1854043..1854048,1854181..1854183,1854205..1854207, 1854271..1854273,1854328..1854330,1854337..1854342) /locus_tag="B565_1656" /note="active site" /db_xref="CDD:29071" misc_feature 1854181..1854183 /locus_tag="B565_1656" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(1854190..1854195,1854199..1854207) /locus_tag="B565_1656" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 1854337..1854345 /locus_tag="B565_1656" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 1854472..1854801 /locus_tag="B565_1656" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature 1854475..1854795 /locus_tag="B565_1656" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(1854484..1854489,1854616..1854618,1854640..1854642, 1854706..1854708,1854763..1854765,1854772..1854777) /locus_tag="B565_1656" /note="active site" /db_xref="CDD:29071" misc_feature 1854616..1854618 /locus_tag="B565_1656" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(1854625..1854630,1854634..1854642) /locus_tag="B565_1656" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 1854772..1854780 /locus_tag="B565_1656" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 1854868..1855161 /locus_tag="B565_1656" /note="Histidine Phosphotransfer domain, involved in signalling through a two part component systems in which an autophosphorylating histidine protein kinase serves as a phosphoryl donor to a response regulator protein; the response regulator protein is...; Region: HPT; cl00086" /db_xref="CDD:193652" gene 1855436..1857172 /locus_tag="B565_1657" /db_xref="GeneID:10487574" CDS 1855436..1857172 /locus_tag="B565_1657" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="YP_004392309.1" /db_xref="GI:330829357" /db_xref="GeneID:10487574" /translation="MSVFLRLSWFFKEQWPRYLAAISLLLMVALLTVIPPKVVGWVVD GITKGGLDNGTLMRYLAGLFGLGVLIYLLRYVWRVMLFGASYRLAYVLRNRLFSHFTR MSPDFYQRHRTGDLMAHATNDIQAVEMTAGEGVLTLVDSIMVGVLVLSIMCSQYSWQL TLVSLLPLPVMAYFMNRFGTQIYTQFKAAQGAFSRLNNKTQEALSGVRVLKSYAVESL EDEGFAELTKQAGERNMAVARIDAKFDPVIYLCIGCSYFLAVAGGSVLVLRDELTLGE LTSFTMYLGQLIWPMFAIAWLFNIIERGSAAYSRIESLLGERSDIEEPAQPAAFTSAF PLQIKGVSYQLEQRTLLADIDVTLKQGGMLGVVGRTGAGKSSLLKLLMRLANPTHGSI VMGGVPIDQLPLATLRSQFAYVPQEPFLFSTTIAANIALGKPDASREEVERVARIACV HDDIVRFPKGYETEVGEKGVTLSGGQKQRLAIARALLLDAPILVLDDALSAVDAHTEQ QILHALKAHRRTLILVSHRMTAVEQADEILVLEQGTISEQGHHGALMAHNGWYADMVR YQRLEEAVEESL" misc_feature 1855487..1856308 /locus_tag="B565_1657" /note="ABC transporter transmembrane region; Region: ABC_membrane; cl00549" /db_xref="CDD:193863" misc_feature 1855499..1857166 /locus_tag="B565_1657" /note="putative multidrug transporter membrane\ATP-binding components; Provisional; Region: PRK10789" /db_xref="CDD:182732" misc_feature 1856453..1857127 /locus_tag="B565_1657" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 1856537..1856560 /locus_tag="B565_1657" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(1856546..1856551,1856555..1856563,1856681..1856683, 1856921..1856926,1857011..1857013) /locus_tag="B565_1657" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 1856672..1856683 /locus_tag="B565_1657" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 1856849..1856878 /locus_tag="B565_1657" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 1856909..1856926 /locus_tag="B565_1657" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 1856933..1856944 /locus_tag="B565_1657" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 1856999..1857019 /locus_tag="B565_1657" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene 1857169..1858920 /locus_tag="B565_1658" /db_xref="GeneID:10487575" CDS 1857169..1858920 /locus_tag="B565_1658" /codon_start=1 /transl_table=11 /product="drug efflux ABC transporter ATP-binding protein/permease" /protein_id="YP_004392310.1" /db_xref="GI:330829358" /db_xref="GeneID:10487575" /translation="MNPTIKRLLAYCAQYPRWLIQAGICLLLATGAEVAGPLLIKLFI DDYLAPRNIVLPTIALIAAGYLGLQVLSAAGFYLQSLRFNRIAQAVVQTLREQVFATA IRLPARYFDKHRSGSLISRITNDTEAIMNLYVQVIGLLVQKVVLLCGILISMALLDLR LMLVCSLLLPAVGGVMWLYQKLSVPVVRATRSLLSDINSRLNESLQGMPVIQAMVQER HFANAFAEVNQQHWSARIKSLKINGILLRPLIDLFYMMVLIGLLALFAHEGGSHAGAI QVGVLYAFISYLGRMIEPLIEMTNQLNQLQQAMVAGERVFALLDETRESTEGELRPLE GRVSFERVSFSYDGEQQVLREVSFAAKPGQMLALVGHTGSGKSTIISLLMGFYPLDQG QIRFDDHALDTLSLAAVRRSIGLVQQDPFIFVGTLAENLRLGRAGIDEARLWQALSEV QLAEFVRSLPQGINTLMEEGGKNLSAGQRQLLSFARALVGDPRILILDEATASVDSQT ELALSQAISAARRGRTTIAIAHRLSTIVDADEILLLSRGQVNERGTHGELMALGGHYA QLFEMQSQGAWLEEKRA" misc_feature 1857175..1858908 /locus_tag="B565_1658" /note="putative multidrug transporter membrane\ATP-binding components; Provisional; Region: PRK10790" /db_xref="CDD:182733" misc_feature 1857223..1858053 /locus_tag="B565_1658" /note="ABC transporter transmembrane region; Region: ABC_membrane; cl00549" /db_xref="CDD:193863" misc_feature 1858171..1858857 /locus_tag="B565_1658" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 1858276..1858299 /locus_tag="B565_1658" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(1858285..1858290,1858294..1858302,1858420..1858422, 1858660..1858665,1858756..1858758) /locus_tag="B565_1658" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 1858411..1858422 /locus_tag="B565_1658" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 1858588..1858617 /locus_tag="B565_1658" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 1858648..1858665 /locus_tag="B565_1658" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 1858672..1858683 /locus_tag="B565_1658" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 1858744..1858764 /locus_tag="B565_1658" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene 1859087..1859560 /locus_tag="B565_1659" /db_xref="GeneID:10487576" CDS 1859087..1859560 /locus_tag="B565_1659" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392311.1" /db_xref="GI:330829359" /db_xref="GeneID:10487576" /translation="MDLQRFKANLALRLFAWRYIPVIGFCAPIIEEMNAKALRIRIPL GWRTRNHLGSMYFGALATGADLVGGLLVMEKGRQRRKKVHFAFKDVQGEFLKRPEGDV QFDCAAGEEIDAMIDESLASGQRINRPIRVVATCPSLNGDEAMARFVLTLSIKAS" gene complement(1859594..1859827) /locus_tag="B565_1660" /db_xref="GeneID:10487577" CDS complement(1859594..1859827) /locus_tag="B565_1660" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392312.1" /db_xref="GI:330829360" /db_xref="GeneID:10487577" /translation="METFLLEGHPFIALCDLIKHQGWADCGGAAKALVAEGLVEVDGQ VETRKRCKIVAEQVVNFNGMKVVVKEGVSPEIG" misc_feature complement(1859618..1859827) /locus_tag="B565_1660" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cl09940" /db_xref="CDD:186878" gene 1860088..1860651 /locus_tag="B565_1661" /db_xref="GeneID:10487578" CDS 1860088..1860651 /locus_tag="B565_1661" /note="similar to Aeromonas caviae phaC PHA synthase" /codon_start=1 /transl_table=11 /product="phaC PHA synthase" /protein_id="YP_004392313.1" /db_xref="GI:330829361" /db_xref="GeneID:10487578" /translation="MTLSRLLLACSALTLCGVAQASTPVQVSLPGVNLPASHQVEGAR ASLLYGRTGQVKGIDLPIFALSDVDQFSGLQLGVFLGAGRVRHQFGGVAINAINWHEG QDTGVNLGLVNLTNNVQGLNWGAVNIAKGNALANVGFVNYAERTTFQIGFINATKHLD GLQIGLANYAANGVFPILPLVNFQKSF" gene 1860736..1861512 /locus_tag="B565_1662" /db_xref="GeneID:10487579" CDS 1860736..1861512 /locus_tag="B565_1662" /note="similar to Aeromonas caviae phaC PHA synthase" /codon_start=1 /transl_table=11 /product="phaC PHA synthase" /protein_id="YP_004392314.1" /db_xref="GI:330829362" /db_xref="GeneID:10487579" /translation="MTAGQMSAIGIGWDVRGWQGSAQAVAVVGWQAESNRLHWLGVSP LFRLSSRVAPDLAALLRPALQNELTQVQVEACPQLALGIDAPLAFPRALRDLLNGQPH SCAVPEREIDNPYAYRDCERWLYQQYGKKPLSATFDRLGNNATLALSMLPQLSDLQLV PTVAPKASRGVLEVYPALAKVGGKASPARPELAAQLPADVLVGTDRYDAALCALMALQ YAAGGKVTVLPELISPPSDMPCDEGWVYHFARHAVEHSGM" gene 1861687..1862550 /locus_tag="B565_1663" /db_xref="GeneID:10487580" CDS 1861687..1862550 /locus_tag="B565_1663" /codon_start=1 /transl_table=11 /product="pyridoxal kinase 2/pyridoxine kinase" /protein_id="YP_004392315.1" /db_xref="GI:330829363" /db_xref="GeneID:10487580" /translation="MKSVLSIQSHVVFGCAGNSAAVFPMRRLGMDVWPINTVQFSNHT QYAQGWQGMAMPAGHISALVKGLGSIEVLSQCDAVLSGYLGSAEQGDEILTVVNAVKA ANPDAIYFCDPVMGHPEKGCIVAPGVTRFLTEQALPVADMMAPNLLELETLCDTHLAD LDQTRAAAHQLLARGVKLVLVKHLGRAAQDSSRFEMLLATPQGDYLIARPLYDFARQP VGVGDLISALMLANLLAGHDAVSAFERTNASVDAVLQETWRQQAYELQLIAAQDAFAL PEVEVRAVKLP" misc_feature 1861693..1862457 /locus_tag="B565_1663" /note="Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP. Mammals are unable to synthesize PLP de novo and...; Region: pyridoxal_pyridoxamine_kinase; cd01173" /db_xref="CDD:29357" misc_feature order(1861693..1861695,1861714..1861716,1861720..1861725, 1861729..1861731,1861741..1861743,1861753..1861755, 1861762..1861764,1861777..1861794,1861801..1861803, 1861810..1861812,1861840..1861845,1861849..1861851, 1861870..1861875,1861894..1861896) /locus_tag="B565_1663" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29357" misc_feature order(1861711..1861713,1861732..1861737,1861804..1861806, 1861813..1861818,1861834..1861836,1861933..1861935, 1861939..1861941,1862341..1862346,1862353..1862355) /locus_tag="B565_1663" /note="pyridoxal binding site [chemical binding]; other site" /db_xref="CDD:29357" misc_feature order(1862020..1862022,1862035..1862037,1862116..1862118, 1862122..1862124,1862131..1862133,1862230..1862235, 1862266..1862268,1862311..1862313,1862317..1862322, 1862338..1862340,1862347..1862355,1862359..1862361, 1862434..1862436,1862446..1862448) /locus_tag="B565_1663" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29357" gene complement(1862657..1863775) /locus_tag="B565_1664" /db_xref="GeneID:10487581" CDS complement(1862657..1863775) /locus_tag="B565_1664" /codon_start=1 /transl_table=11 /product="glycerol dehydrogenase" /protein_id="YP_004392316.1" /db_xref="GI:330829364" /db_xref="GeneID:10487581" /translation="MPTLPRTVTSPKKFIIGQHLLPQLHEHVKDFGDYALLISDEFIL ERVREEALAGLLQAGLRGVVDKFRYECTEQEIHRLTHLAEQYGANVIVGIGGGKTLDV AKAVAFYLRRPVVLFPTIASTDAPCTALAVIYNQAGEFERYLFLPQNPDVVLADTAII AAAPPRFFSAGVGDALATYFEARACYRADGLNLVGKRPSRTGLGLAQLCYELLGENIE LAMDAIRHHVSTPALEQVIEATIYLSGVGAEAGGLAAAHAVNNGMSLIAELHRAQHGE KVVFGLLTQLVLERAPQHELDEVFRIIDCAGLPMTLQELGLTHFDESEWRKVAQLACD PLDTMGNMPMTVSEQDVYAAMVAANAMAERYRLRHPRI" misc_feature complement(1862720..1863745) /locus_tag="B565_1664" /note="Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation; Region: GlyDH; cd08170" /db_xref="CDD:173929" misc_feature complement(1862723..1863745) /locus_tag="B565_1664" /note="Iron-containing alcohol dehydrogenase; Region: Fe-ADH; pfam00465" /db_xref="CDD:189559" misc_feature complement(order(1863062..1863064,1863071..1863076, 1863143..1863145,1863152..1863154,1863725..1863730, 1863734..1863742)) /locus_tag="B565_1664" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173929" misc_feature complement(order(1862954..1862956,1862993..1862995, 1863005..1863007,1863242..1863244,1863254..1863256, 1863275..1863277,1863299..1863301,1863350..1863355, 1863410..1863412,1863416..1863421,1863464..1863466, 1863473..1863475,1863482..1863490,1863656..1863658)) /locus_tag="B565_1664" /note="active site" /db_xref="CDD:173929" misc_feature complement(order(1862954..1862956,1863005..1863007, 1863254..1863256)) /locus_tag="B565_1664" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173929" gene complement(1864073..1864579) /locus_tag="B565_1665" /db_xref="GeneID:10487582" CDS complement(1864073..1864579) /locus_tag="B565_1665" /codon_start=1 /transl_table=11 /product="acetyltransferase family protein" /protein_id="YP_004392317.1" /db_xref="GI:330829365" /db_xref="GeneID:10487582" /translation="MDIVEVNSAATYQSALITLLQDCVDSGASVGFLPPLTTEESTRY WQGVEADLAAGHRKLWLALEQQQIVGAVQLALCGKANARHRAEVEKLMVLQTARGKGV GRALMQALEQGAHAAGRSLLVLDTRAGDVASHLYRQLGYLEAGQIPIFARNADGTLAA TVIFYKPL" misc_feature complement(1864109..1864579) /locus_tag="B565_1665" /note="Acetyltransferases [General function prediction only]; Region: RimI; COG0456" /db_xref="CDD:30804" misc_feature complement(1864205..1864405) /locus_tag="B565_1665" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cd04301" /db_xref="CDD:173926" misc_feature complement(order(1864268..1864273,1864301..1864309)) /locus_tag="B565_1665" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene complement(1864671..1865063) /locus_tag="B565_1666" /db_xref="GeneID:10487583" CDS complement(1864671..1865063) /locus_tag="B565_1666" /codon_start=1 /transl_table=11 /product="Nudix family protein, MutT subfamily" /protein_id="YP_004392318.1" /db_xref="GI:330829366" /db_xref="GeneID:10487583" /translation="MIDKLAWLTFKDQQLLCARSHGKGIYYIPGGKREPGESDEAALI REIEEELAVTLQPDTLRFVCEFSAQADGKPAGVEVRLRCYTGEASGTPIASAEIAELR WLDSSHLDELSPVSRLLFVWLVEQGRIR" misc_feature complement(1864710..1865060) /locus_tag="B565_1666" /note="Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly...; Region: Nudix_Hydrolase_31; cd04690" /db_xref="CDD:72925" misc_feature complement(1864905..1864973) /locus_tag="B565_1666" /note="nudix motif; other site" /db_xref="CDD:72925" gene 1865387..1866247 /locus_tag="B565_1667" /db_xref="GeneID:10487584" CDS 1865387..1866247 /locus_tag="B565_1667" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392319.1" /db_xref="GI:330829367" /db_xref="GeneID:10487584" /translation="MQVSKMQIAAESKFIGLGVAGNFAGHLEQAGEASDFVAVVVRDT TAPKALFPFFVPGHPGQLGVFPLSNNAIFLPEAAVSGDEKVQIEPEVALWCELEYAGK QLVAIHPRAFGAYNDCSIRRPNAKKISEKKNWGEESKGLAAKLLPLSGFAAGCELDDY RIACYLERDGELHAYGVDSAAIDYSYFHGKLLDWAIDKFNHQQDEGPAEHIQGLLAQA GHPPHALISIGATRYTPFGETHFLKPGDTSCVVVYPGSRYSEADIREAIRSRNFGADM SVLLQAVQAR" gene 1866305..1866745 /locus_tag="B565_1668" /db_xref="GeneID:10487585" CDS 1866305..1866745 /locus_tag="B565_1668" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004392320.1" /db_xref="GI:330829368" /db_xref="GeneID:10487585" /translation="MTIVPVSRADYPALIDLWEASVRATHHFLPEAEILALKPLILEH YFDAVTLHSARTKEGQITGFSGVYEGKLEMLFVAPEARGSGVGRLLVAHAITQGGATQ VDVNEQNEQAVGFYLKMGFTVTGRSPLDGQGKPYPLLHMALAPT" misc_feature 1866308..1866730 /locus_tag="B565_1668" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(1866824..1867144) /locus_tag="B565_1669" /db_xref="GeneID:10487586" CDS complement(1866824..1867144) /locus_tag="B565_1669" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392321.1" /db_xref="GI:330829369" /db_xref="GeneID:10487586" /translation="MKPLFISAALLLTACQSAPAPSQGETLYINSQLVDCVGVGPMQC MQVRSDEQQPWTLFYQNIEGFQFEPGYRYQLTVSKEQLTDVPADAPSVRYQLIKVVNK VASK" gene complement(1867237..1868523) /locus_tag="B565_1670" /db_xref="GeneID:10487587" CDS complement(1867237..1868523) /locus_tag="B565_1670" /codon_start=1 /transl_table=11 /product="Citrate synthase" /protein_id="YP_004392322.1" /db_xref="GI:330829370" /db_xref="GeneID:10487587" /translation="MADKIATLHLPGKDPVELPILSGTIGPDVIDVRKLGSQGYFTFD PGFMATGSCKSAITYIDGDQGVLLHRGYPIAQLATQATYLEVCYILLYGEAPTKAQYA EFERLVTRHTMVHEQIAFFFRGFRRDSHPMAIMCGVVSALSAFYHDALDINNEQHREI CAFRLLSKMPTLAAMCYKYSIGQPFMQPRNALSYAGNFLHMMFGVPTEEYKVNPIVER AMDRIFTLHADHEQNASTSTVRLAGSSGANPFACIAAGIASLWGPAHGGANEACLRML EEIGSVDRIPEYIAKAKDKNDPFRLMGFGHRVYKNHDPRATVMRETCHEVLTELQIKD PLLDVAMELERIALSDPYFVEKKLYPNVDFYSGIIMKAIGIPMSMFTVIFAISRTIGW IAHWNEFHSDPDSKIGRPRQLYVGHPLREFTPLEQR" misc_feature complement(1867276..1868472) /locus_tag="B565_1670" /note="Escherichia coli (Ec) citrate synthase (CS) GltA_like. CS catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or Krebs cycle). The overall CS...; Region: EcCS_like; cd06114" /db_xref="CDD:99867" misc_feature complement(order(1867276..1867302,1867306..1867308, 1867600..1867605,1867717..1867722,1867726..1867743, 1867747..1867752,1867771..1867773,1867780..1867791, 1867798..1867800,1867810..1867815,1867822..1867836, 1868089..1868097,1868104..1868106,1868113..1868115, 1868125..1868127,1868137..1868139,1868149..1868157, 1868161..1868166,1868173..1868175,1868206..1868211, 1868218..1868223,1868230..1868232,1868236..1868247, 1868269..1868271,1868284..1868286,1868296..1868298, 1868305..1868316,1868350..1868352,1868356..1868406)) /locus_tag="B565_1670" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99867" misc_feature complement(1867294..1868388) /locus_tag="B565_1670" /note="Citrate synthase; Region: Citrate_synt; pfam00285" /db_xref="CDD:189486" misc_feature complement(order(1867297..1867299,1867306..1867308, 1867360..1867362,1867372..1867374,1867435..1867437, 1867441..1867443,1867450..1867452,1867456..1867458, 1867579..1867581,1867594..1867596,1867603..1867626, 1867711..1867713,1867720..1867722,1867726..1867734, 1867825..1867827,1867834..1867836,1868380..1868382)) /locus_tag="B565_1670" /note="active site" /db_xref="CDD:99867" misc_feature complement(order(1867360..1867362,1867441..1867443, 1867579..1867581,1867603..1867617,1867621..1867626, 1867729..1867734,1867825..1867827,1867834..1867836, 1868380..1868382)) /locus_tag="B565_1670" /note="citrylCoA binding site [chemical binding]; other site" /db_xref="CDD:99867" misc_feature complement(order(1867954..1867956,1868020..1868022, 1868032..1868034,1868086..1868088,1868179..1868199, 1868203..1868205)) /locus_tag="B565_1670" /note="NADH binding [chemical binding]; other site" /db_xref="CDD:99867" misc_feature complement(order(1867906..1867911,1867951..1867989, 1868140..1868157,1868164..1868190)) /locus_tag="B565_1670" /note="cationic pore residues; other site" /db_xref="CDD:99867" misc_feature complement(order(1867297..1867299,1867360..1867362, 1867372..1867374,1867435..1867437,1867579..1867581, 1867606..1867608,1867726..1867731,1867825..1867827, 1867834..1867836)) /locus_tag="B565_1670" /note="oxalacetate/citrate binding site [chemical binding]; other site" /db_xref="CDD:99867" misc_feature complement(order(1867306..1867308,1867435..1867437, 1867441..1867443,1867450..1867452,1867456..1867458, 1867594..1867596,1867603..1867605,1867609..1867626, 1867711..1867713,1867720..1867722,1867729..1867734)) /locus_tag="B565_1670" /note="coenzyme A binding site [chemical binding]; other site" /db_xref="CDD:99867" misc_feature complement(order(1867435..1867437,1867606..1867608, 1867729..1867731)) /locus_tag="B565_1670" /note="catalytic triad [active]" /db_xref="CDD:99867" gene 1868966..1869343 /locus_tag="B565_1671" /db_xref="GeneID:10487588" CDS 1868966..1869343 /locus_tag="B565_1671" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase cytochrome b556 subunit" /protein_id="YP_004392323.1" /db_xref="GI:330829371" /db_xref="GeneID:10487588" /translation="MKNKQRPVNLDLQTISFPVTAIASILHRVSGVITFVALGILLWM LGTSLASPEGFETVVAIMDNFLVKLVLWGILTALAYHIVGGLRHLVMDMGYWEELESG NQSARVAFVITAILAVLAGVLVW" misc_feature 1868981..1869331 /locus_tag="B565_1671" /note="Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the...; Region: SQR_TypeC_SdhC; cd03499" /db_xref="CDD:48060" misc_feature order(1868981..1868992,1869005..1869013,1869017..1869019, 1869026..1869028,1869047..1869049,1869227..1869229, 1869236..1869238,1869242..1869244) /locus_tag="B565_1671" /note="Iron-sulfur protein interface; other site" /db_xref="CDD:48060" misc_feature order(1869014..1869016,1869035..1869040,1869047..1869049) /locus_tag="B565_1671" /note="proximal quinone binding site [chemical binding]; other site" /db_xref="CDD:48060" misc_feature order(1869047..1869049,1869080..1869082,1869089..1869091, 1869098..1869103,1869128..1869130,1869176..1869178, 1869239..1869241,1869323..1869325) /locus_tag="B565_1671" /note="SdhD (CybS) interface [polypeptide binding]; other site" /db_xref="CDD:48060" misc_feature order(1869047..1869049,1869065..1869070,1869206..1869211) /locus_tag="B565_1671" /note="proximal heme binding site [chemical binding]; other site" /db_xref="CDD:48060" gene 1869337..1869681 /locus_tag="B565_1672" /db_xref="GeneID:10487589" CDS 1869337..1869681 /locus_tag="B565_1672" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase hydrophobic membrane anchor protein" /protein_id="YP_004392324.1" /db_xref="GI:330829372" /db_xref="GeneID:10487589" /translation="MVTNSATFGRSGVHDYILIRATALIMTCYVLYLVGFVAFNDITY EVWAGFFAKTFTKVFTLLTLLCVLIHAWIGLWQVLTDYIKPVGLRGALQFALVVVLFV YLMTGFVVLWGV" misc_feature 1869379..1869672 /locus_tag="B565_1672" /note="Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase D (SdhD) subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. E. coli SQR, a member of this subfamily, reduces the...; Region: SQR_TypeC_SdhD; cd03494" /db_xref="CDD:48055" misc_feature order(1869394..1869396,1869466..1869468,1869475..1869477, 1869577..1869579,1869643..1869645,1869652..1869654) /locus_tag="B565_1672" /note="SdhC subunit interface [polypeptide binding]; other site" /db_xref="CDD:48055" misc_feature order(1869403..1869405,1869415..1869417,1869535..1869537, 1869544..1869546,1869556..1869558) /locus_tag="B565_1672" /note="proximal heme binding site [chemical binding]; other site" /db_xref="CDD:48055" misc_feature order(1869445..1869447,1869460..1869462) /locus_tag="B565_1672" /note="cardiolipin binding site; other site" /db_xref="CDD:48055" misc_feature order(1869565..1869567,1869574..1869579,1869586..1869588) /locus_tag="B565_1672" /note="Iron-sulfur protein interface; other site" /db_xref="CDD:48055" misc_feature 1869580..1869582 /locus_tag="B565_1672" /note="proximal quinone binding site [chemical binding]; other site" /db_xref="CDD:48055" gene 1869683..1871449 /locus_tag="B565_1673" /db_xref="GeneID:10487590" CDS 1869683..1871449 /locus_tag="B565_1673" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase, flavoprotein subunit" /protein_id="YP_004392325.1" /db_xref="GI:330829373" /db_xref="GeneID:10487590" /translation="MTIPTREFDAVVIGAGGAGMRAALQIAQSGKSCALLSKVFPTRS HTVSAQGGITVALGNAHDDNWQWHMYDTVKGSDYIGDQEAIEYMCKTGPEAIYELENM GLPFSRFDNGSVYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNVKNKTTV FSEWYALDLVKNQDGHVVGCTAIDMESGEVVYFKAKATVLATGGAGRIYQSTTNAHIN TGDGVGMALRAGVGVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERY APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHIKLKLDHLGKEVLESRLPGICELS RTFAHVDPVKEPIPIIPTCHYMMGGVPTNVNGQCLTQDKNGNDVPVVGLFAVGEIACV SVHGANRLGGNSLLDLVVFGRAAGMHLVNTLGEMEHGRDASESDLDAALARFNRWENC RDGEDPVQIRKDLQRCMQNNFSVFREGAAMAEGLAELKVIRERLKSARLDDTSKEFNT QRIECLELDNLMETAFATAVAANFRTESRGAHCRFDFPDRDDENWLCHSLYHPDTESM TRRAVNMSPKTREAFPPKVRTY" misc_feature 1869683..1871446 /locus_tag="B565_1673" /note="succinate dehydrogenase flavoprotein subunit; Reviewed; Region: sdhA; PRK08958" /db_xref="CDD:181594" misc_feature 1869698..1870927 /locus_tag="B565_1673" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 1871060..1871446 /locus_tag="B565_1673" /note="domain; Region: Succ_DH_flav_C; pfam02910" /db_xref="CDD:190472" gene 1871466..1872182 /locus_tag="B565_1674" /db_xref="GeneID:10487591" CDS 1871466..1872182 /locus_tag="B565_1674" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase iron-sulfur protein" /protein_id="YP_004392326.1" /db_xref="GI:330829374" /db_xref="GeneID:10487591" /translation="MNVTFSVYRYNPDVDNVPHMKEYRLDIPEGSDMMVLDALIQLKE LDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPLSDLLKKGNNVVIRPLPGLPVIRD LVIDMTQFYTQWEKVKPFLINDDKLPPVREHLQSPEERAKLDGLYECILCACCSTSCP SFWWNPDKFIGPAGLLAAYRWLADSRDTATTERLGNLDDAFSVFRCHGIMNCVNVCPK GLNPTKAIGQIKSMLLNRAV" misc_feature 1871475..1872179 /locus_tag="B565_1674" /note="succinate dehydrogenase iron-sulfur subunit; Reviewed; Region: sdhB; PRK05950" /db_xref="CDD:180322" gene 1872298..1875105 /locus_tag="B565_1675" /db_xref="GeneID:10487592" CDS 1872298..1875105 /locus_tag="B565_1675" /codon_start=1 /transl_table=11 /product="Oxoglutarate dehydrogenase (succinyl-transferring), E1 component" /protein_id="YP_004392327.1" /db_xref="GI:330829375" /db_xref="GeneID:10487592" /translation="MHNGVMKAWLESSHLAGANASYIEDLYESFLENPDSVSDEWRSL FSELPQVNGHAVEQPHSQVRDYFRRLAKDPSRYSAPVSDPQVDAKQVRVLQLINAFRF RGHQNANLDPLGLWQRDTVAELDPAFHNLQGADMEATFNVGSYAIGRETMVLSDLYAS LKKTYCGSIGADYMHLTSTEEKRWLQQRLESIEGKGSYTLEEKTRFLESLTAAEGLEK YLGAKFPGAKRFSLEGGDAMIPMLKELIRRAGEQGCKEAVIGMAHRGRLNVLINVLGK RAQDLFDEFAGKHGESWGTGDVKYHMGFSSDFATPGGNVHLALAFNPSHLEIVNPVVI GSVRARMDRRGDKDGSSVLPITIHGDSAMAGQGVVAETFNMSQTRAYGVGGTVRIVIN NQVGFTTSYIRDLRSTEYCTDIAKAVQAPVLHVNGDDPEAVVLVTQIALDYRNTFKRD VVIELVCYRRHGHNEADEPSATQPLMYQKIKQHPTPRKIYADQLVAEGSLAQERATEL VNEYREALDRGERVSKEWRPMELHSVDWTPYLGHDWNMAYESAVPMDHLKSLGERVSQ YPATHVLQRQVEKIYEDRRLMAAGEKLVDWGFAETLAYATLVDKGSRIRFTGEDSGRG TFFHRHAVLHSQTDASTYTPLCNLHDEQGPFEVYDSVLTENAVLAFEYGYASAEPAGL TIWEAQFGDFANCAQVVVDQFLSSGEQKWGRMCGLTMLLPHGYEGQGPEHSSARLERY LQMCAQHNMQVCVPSTPAQVFHMLRRQVVRPMRRPLIVMTPKSLLRHPLAVSKLEELA EGTFQNAIGEIDALDPKAVKRVVFCSGKVYYDLLDARRKAEQQDVALVRIEQLYPFPE EEVRAILADYSHVTDFVWCQEEPQNQGAWYCTRHHYDGVLPAGATLRYAGRPASASPA VGYMSVHAKQQKALVEDALTL" misc_feature 1872301..1875099 /locus_tag="B565_1675" /note="2-oxoglutarate dehydrogenase E1 component; Reviewed; Region: sucA; PRK09404" /db_xref="CDD:181824" misc_feature 1872943..1873728 /locus_tag="B565_1675" /note="TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA and carbon dioxide, a key reaction of...; Region: TPP_E1_OGDC_like; cd02016" /db_xref="CDD:48179" misc_feature order(1873273..1873275,1873372..1873383,1873474..1873476, 1873480..1873482) /locus_tag="B565_1675" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:48179" misc_feature 1874077..1874655 /locus_tag="B565_1675" /note="Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes; Region: TPP_enzyme_PYR; cl11410" /db_xref="CDD:196220" gene 1875141..1876331 /locus_tag="B565_1676" /db_xref="GeneID:10487593" CDS 1875141..1876331 /locus_tag="B565_1676" /codon_start=1 /transl_table=11 /product="2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase" /protein_id="YP_004392328.1" /db_xref="GI:330829376" /db_xref="GeneID:10487593" /translation="MTIEIKVPDLPESVADATIATWHKKPGDLVARDEVLVDIETDKV VLEVPAPQAGVLGDILQGEGATVLSRQLIAILTAAPVAGEETKEKPAEAVADDGADGL SPSVRRLIGEHDIDVTKLTGTGKGGRITKDDVEAFIKAKSQPAVAAPVAAAAPAAKVA PLGGRTDKRVPMTRLRKRIAERLLEAKNTTAMLTTFNEVNMKPIMDLRKQYGEIFEKK HGIKLGFMSFYVKAVVESLKRYPEVNAALDGDDVVYHNYFDVSIAVSTPRGLVTPVLR DCDNMSLADIEKAIKDLAGKGRDGKLTVDELTGGNFTITNGGVFGSLMSTPIINPPQS AILGMHKIQDRPMAVDGKVEILPMMYLALSYDHRLIDGRESVGFLVSVKELLEDPTRL LLDV" misc_feature 1875141..1876328 /locus_tag="B565_1676" /note="dihydrolipoamide succinyltransferase; Validated; Region: PRK05704" /db_xref="CDD:180214" misc_feature 1875147..1875368 /locus_tag="B565_1676" /note="Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid...; Region: lipoyl_domain; cd06849" /db_xref="CDD:133458" misc_feature order(1875237..1875239,1875258..1875275,1875285..1875287) /locus_tag="B565_1676" /note="E3 interaction surface; other site" /db_xref="CDD:133458" misc_feature 1875267..1875269 /locus_tag="B565_1676" /note="lipoyl attachment site [posttranslational modification]; other site" /db_xref="CDD:133458" misc_feature 1875444..1875548 /locus_tag="B565_1676" /note="e3 binding domain; Region: E3_binding; pfam02817" /db_xref="CDD:111687" misc_feature 1875630..1876322 /locus_tag="B565_1676" /note="2-oxoacid dehydrogenases acyltransferase (catalytic domain); Region: 2-oxoacid_dh; cl02008" /db_xref="CDD:194225" gene 1876503..1877669 /locus_tag="B565_1677" /db_xref="GeneID:10487594" CDS 1876503..1877669 /locus_tag="B565_1677" /codon_start=1 /transl_table=11 /product="succinyl-CoA ligase [ADP-forming] subunit beta" /protein_id="YP_004392329.1" /db_xref="GI:330829377" /db_xref="GeneID:10487594" /translation="MNLHEYQAKQLFAEYGLPVSEGYACATPQEAAEAADKIGGNTWV VKCQVHAGGRGKAGGVKVAKSKDEIRAFAQNWLGKNLVTYQTDANGQPVTKILVESCT DIAKELYLGAVVDRGSRRVVFMASTEGGVDIEKIAHETPHLIHKAAIDPLVGPQAYQA RELAFKLGLVGDQIKQFTKIFMGLGQMFLDCDFALLEINPLVITAQGNLHCLDGKINI DANALYRQPKLREMHDPSQDDPREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV NLHGGKPANFLDVGGGATKERVTEAFKIILSDNNVKAVLVNIFGGIVRCDMIAEGIIG AVKEVGVKVPVVVRLEGNNAELGGIKLAESGLNIIAAKSLTDAAQQVVKAAEAN" misc_feature 1876503..1877663 /locus_tag="B565_1677" /note="succinyl-CoA synthetase subunit beta; Provisional; Region: sucC; PRK00696" /db_xref="CDD:179088" misc_feature 1876506..1877111 /locus_tag="B565_1677" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" misc_feature 1877286..1877648 /locus_tag="B565_1677" /note="CoA-ligase; Region: Ligase_CoA; pfam00549" /db_xref="CDD:144220" gene 1877669..1878541 /locus_tag="B565_1678" /db_xref="GeneID:10487595" CDS 1877669..1878541 /locus_tag="B565_1678" /codon_start=1 /transl_table=11 /product="succinyl-CoA ligase [ADP-forming] subunit alpha" /protein_id="YP_004392330.1" /db_xref="GI:330829378" /db_xref="GeneID:10487595" /translation="MSVLINKDTRVICQGFTGGQGTFHSEQALSYGTQLVGGVSPGKG GTTHLGLPVFNTVRDAVEATGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPT LDMLDVKVKLQETGVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYE AVKQTTDEGFGQSTCVGIGGDPIPGSNFIDILEMFQNDPQTEAIVMIGEIGGNAEEDA AAYIKAHVTKPVVSYIAGVTAPPGKRMGHAGAIISGGKGTAAEKFAALEDAGVKTVRS LADIGKALREVTGW" misc_feature 1877669..1878538 /locus_tag="B565_1678" /note="succinyl-CoA synthetase subunit alpha; Validated; Region: PRK05678" /db_xref="CDD:180194" misc_feature 1877684..1877965 /locus_tag="B565_1678" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 1878119..1878481 /locus_tag="B565_1678" /note="CoA-ligase; Region: Ligase_CoA; pfam00549" /db_xref="CDD:144220" gene complement(1878719..1879597) /locus_tag="B565_1679" /db_xref="GeneID:10487596" CDS complement(1878719..1879597) /locus_tag="B565_1679" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392331.1" /db_xref="GI:330829379" /db_xref="GeneID:10487596" /translation="MGNPMIVNKDAIIRNEQSMKVSSLTLDKEDLLSFCKILQERARA AGELEIAKYQKGEMSDEQYKVNIETLRSGFELRVTIAGKNGENIWGTIDEVFASPNFP SDVRSLFIDSASSLKISHNYYVRNDFVIFLDFNKPRIVDFTLLPSQETPNESNVKVRG YDATWVNGVFAEIRTFIESKSSSLSIVHTHSIYDILLWFIGFPLGFWVCYKLDKYIES IFSNTSKFLVSAIYLYCFIGVLFLFRFWFHYLRWVSPLVEFRAKNSVIVMHRLLISTI ALSVLSSFIYDIIKSI" gene complement(1880074..1881480) /locus_tag="B565_1680" /db_xref="GeneID:10487597" CDS complement(1880074..1881480) /locus_tag="B565_1680" /codon_start=1 /transl_table=11 /product="glycine/D-amino acid oxidase" /protein_id="YP_004392332.1" /db_xref="GI:330829380" /db_xref="GeneID:10487597" /translation="MSTLPFWLAEALAAEQPAPPTPLVGNHEADVCIVGGGFTGLWSA ITLKQTEPHLHVIVLEKDRCGSGASGRNGGCLLTWSAKYLTLKRLFGEQQAAWLVQRS EQAVHEIAHFCETHNIEAELRVEGTCYTATSEAQRGLMEPVLQELKRADLNQWQAIEE GELASQSGSHVHLEGLYSPHACSVQPALLVRGLLRVARELGIEVYEHSPMQRLEAGQP ARVQTPQGEVRARKVVLALNSAMVQHFREFRRSIVLVSSDMVITDPAPDALAAQQLEH GRSVVDGRTFVHYYRSTPQGRLMLGKGGNTFAFANRHLAEFDAPSRYLAPLTRTLRRF FPALKEVPIAASWCGASDRSVDGLPFFGHWRGQPNIVYGLGYSGNGVAQSWMGGQILA ALVRDEVREADKPWRDCALVSGPRGYFPPEPFRWLGAMAVRNAIRRKERAEDENRPVA WYDKQLAKLADAAGKADK" misc_feature complement(1880125..1881468) /locus_tag="B565_1680" /note="Malate:quinone oxidoreductase (Mqo); Region: Mqo; cl14881" /db_xref="CDD:196842" misc_feature complement(1880233..1881408) /locus_tag="B565_1680" /note="Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:31009" gene complement(1881499..1883235) /locus_tag="B565_1681" /db_xref="GeneID:10487598" CDS complement(1881499..1883235) /locus_tag="B565_1681" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="YP_004392333.1" /db_xref="GI:330829381" /db_xref="GeneID:10487598" /translation="MTAPFATSSLLPPATARQDSRWQRLCRGWSRDQLLQLILLVLGI ALLVGGLLLPLLTMLQKSLQDENGLWVGLANFSAYFDSPHLGRTIGNTLWLGVLITAL VVTIAFGYAYALTRTCMPGKPLFRLIGLIPLLMPSLLPAISLVYWFGNQGIAKGLLGG ESIYGPIGIVIGLGFWCFPHALMILITALGQSDARLYEASRVLGSSGWRTFVTVTLPT ARYGLLSAAIAVFTLTICDFGVAKVIGGQYSVLATDIYRQVIGMQNFSLGAVASVTLL LPALLSFALEHRVRSKMQEQSSTKAVPYQPKPHRLRDLLALGWCTLWALLFLALVGMA VYGSLVQFWPYNLGLTLDHYAFDSNSVYGWQPFTNTLQLGLYTALIGTVLVMVLAWAQ EKGRHFAPLRQLLHLLAMLSLAVPGMVLGLGYIFFFNGNPFFGGLYGTLPLMVLSCVI HYYTVGHMTALTSLKQLPKELELVAISLRIPLWKAFWRVTLPASLPALLEIFIYLFVN AMTTTSAVIFLYSSDSVLASIAVLNMEDSGDTAAAAAMATLILLAAATVKLLQLFLSR ALLDRTQRWRHQ" misc_feature complement(1881508..1883043) /locus_tag="B565_1681" /note="putative 2-aminoethylphosphonate ABC transporter, permease protein; Region: PhnU2; TIGR03262" /db_xref="CDD:132306" misc_feature complement(1882498..1882971) /locus_tag="B565_1681" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(1882507..1882512,1882519..1882530, 1882549..1882551,1882558..1882563,1882603..1882605, 1882654..1882656,1882663..1882668,1882678..1882680, 1882684..1882689,1882696..1882698,1882702..1882704, 1882711..1882716,1882801..1882803,1882807..1882812, 1882819..1882848,1882852..1882863,1882891..1882893, 1882906..1882911,1882918..1882923)) /locus_tag="B565_1681" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(1882513..1882530,1882801..1882845)) /locus_tag="B565_1681" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature complement(order(1882510..1882512,1882729..1882731, 1882801..1882803)) /locus_tag="B565_1681" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature complement(order(1882582..1882584,1882594..1882599, 1882615..1882653)) /locus_tag="B565_1681" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" misc_feature complement(1881631..1882137) /locus_tag="B565_1681" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(1881640..1881645,1881682..1881687, 1881694..1881705,1881724..1881726,1881733..1881738, 1881778..1881780,1881829..1881831,1881838..1881843, 1881853..1881855,1881859..1881864,1881871..1881873, 1881877..1881879,1881883..1881888,1881961..1881963, 1881967..1881972,1881979..1882008,1882012..1882023, 1882051..1882053,1882072..1882077,1882084..1882089)) /locus_tag="B565_1681" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(1881688..1881705,1881961..1882005)) /locus_tag="B565_1681" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature complement(order(1881640..1881642,1881649..1881651, 1881685..1881687,1881901..1881903,1881961..1881963)) /locus_tag="B565_1681" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature complement(order(1881757..1881759,1881769..1881774, 1881790..1881828)) /locus_tag="B565_1681" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene complement(1883232..1884326) /locus_tag="B565_1682" /db_xref="GeneID:10487599" CDS complement(1883232..1884326) /locus_tag="B565_1682" /codon_start=1 /transl_table=11 /product="ferric cations import ATP-binding protein FbpC 2" /protein_id="YP_004392334.1" /db_xref="GI:330829382" /db_xref="GeneID:10487599" /translation="MTQPYLDIQHLNKQFGAFQALKGISLTIEPGEFICFLGPSGCGK TTLLRAIAGLDLPDSGEIWQGGRNISRLPPQERDFGIVFQSYALFPNLTVAQNIAFGL ENQGLARDLIKERVDHWLGLVDLTAQSHKYPSQISGGQQQRVALARALALSPGLLLLD EPLSALDALVRTHLRSEIRALQQRLGITTIMVTHDQEEALTMADRIVVMEGGRIVQVG TPQEIYHQPASRFVASFVGTMNFLETLVLSPTQVRLNEQPLQLANQAAAGSKLQVAIR PEAITLSAPSEPYLGQHGVEATIDQVEFLGAAQRLICTADTYLGPQQILVERPTHELP RHQQGGWRSGMRCSLHWPAGAMQLFEGERP" misc_feature complement(1883247..1884320) /locus_tag="B565_1682" /note="putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein; Region: PhnT2; TIGR03265" /db_xref="CDD:163196" misc_feature complement(1883616..1884311) /locus_tag="B565_1682" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(1884192..1884215) /locus_tag="B565_1682" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature complement(order(1883745..1883747,1883844..1883849, 1884075..1884077,1884189..1884197,1884201..1884206)) /locus_tag="B565_1682" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature complement(1884075..1884086) /locus_tag="B565_1682" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature complement(1883892..1883921) /locus_tag="B565_1682" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature complement(1883844..1883861) /locus_tag="B565_1682" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature complement(1883826..1883837) /locus_tag="B565_1682" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature complement(1883739..1883759) /locus_tag="B565_1682" /note="H-loop/switch region; other site" /db_xref="CDD:72971" misc_feature complement(1883250..1883510) /locus_tag="B565_1682" /note="TOBE domain; Region: TOBE_2; cl01440" /db_xref="CDD:163979" gene complement(1884599..1885618) /locus_tag="B565_1683" /db_xref="GeneID:10487600" CDS complement(1884599..1885618) /locus_tag="B565_1683" /codon_start=1 /transl_table=11 /product="ABC transporter periplasmic binding protein" /protein_id="YP_004392335.1" /db_xref="GI:330829383" /db_xref="GeneID:10487600" /translation="MKQGTHLLAAAVLAAMTAPALAATDLTVYTAFEPEQLNELKTAF ERQHPDINIKWVRDSTGVVTARLLAEKAQPKADVVWGLAATSLMQLDQQQMLNAYAPK GLDKLDSRFRDSKAEPHWIGLDAFFSAICFNKVEAEKQGIPAPTSWADLTKPIYKGKV IMPNPSSSGTGYLSVAGWLQTMGEQQGWQFMNGLHQNIDRYTHSGSAPCKLAASGETV IGISFDFPATSLKAKGAPIEVVFPKEGSGWDMEAAAIIKGTPKLEAAKQLLDFAATEQ ANALYNKSFAVVAIPDVAQPRAGYPADIKGQMIDNDFSWAARERNAILAQWSASFDGK TEAKQ" misc_feature complement(1884611..1885537) /locus_tag="B565_1683" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(1885739..1886446) /locus_tag="B565_1684" /db_xref="GeneID:10487601" CDS complement(1885739..1886446) /locus_tag="B565_1684" /codon_start=1 /transl_table=11 /product="2-aminoethylphosphonate transport, repressor" /protein_id="YP_004392336.1" /db_xref="GI:330829384" /db_xref="GeneID:10487601" /translation="MSKPQYLQIKDALANQILAGGLAPNDKLPSERLLGELYGTTRVT IREALVQLEANGLIYREDRRGWFVTPPRFRLNPRRTSNFHQIVREQGGEPHTELLEKS RQAVPPALMAQLQLKPFDSLFLLKRLRYANGRAICYCENHCLPERVPGLLALDLNGSL TEIYQAHYDLHYARMQVRFFPTALPDEVAKALGATAGLPALRLERLNFDQHGRVLDFD LEYWRHDSLEIEVDTQD" misc_feature complement(1885745..1886437) /locus_tag="B565_1684" /note="transcriptional regulator protein; Region: phnR; TIGR03337" /db_xref="CDD:132380" misc_feature complement(1886240..1886437) /locus_tag="B565_1684" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature complement(order(1886249..1886260,1886264..1886269, 1886297..1886299,1886306..1886311,1886315..1886329, 1886351..1886356,1886360..1886362,1886429..1886431, 1886435..1886437)) /locus_tag="B565_1684" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature complement(1885763..1886182) /locus_tag="B565_1684" /note="UTRA domain; Region: UTRA; cl06649" /db_xref="CDD:195338" gene 1886712..1887851 /locus_tag="B565_1685" /db_xref="GeneID:10487602" CDS 1886712..1887851 /locus_tag="B565_1685" /codon_start=1 /transl_table=11 /product="2-aminoethylphosphonate--pyruvate transaminase" /protein_id="YP_004392337.1" /db_xref="GI:330829385" /db_xref="GeneID:10487602" /translation="MTHIPAAPAAVDYLLLTPGPLSTTATVRAAMLQDSCTWDADYNQ GVVEPIRRELVRLATGPEYQSDYSAVLLQGSGSYVVESVLGSAIGVDECLLIINNGAY GARMGEMARCLGLRHHELDCGETTRPEPAAIEAMLACHPEITHLAMVHCETTTGMLNP LEEVAALCQRRGIRLIVDAMSSFGGIPIDMGHLGIEFLISSANKCIQGVPGFGFVIAR RVALTACAGRARSVSLDLHAQWQTMEQQGGKWRFTSPTHTVLAFAQALRELDEEGGIA ARHQRYSENQRTLVDGMAALGFAPLLPEQWQSPIITAFYSPAHPDYRFADFYQRLKAQ GFVIYPGKVSQADCFRIGNIGDVTPERVRDLLAAMASACYWQGAA" misc_feature 1886751..1887815 /locus_tag="B565_1685" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl00321" /db_xref="CDD:193768" misc_feature order(1886937..1886942,1886949..1886951,1887156..1887158, 1887243..1887245,1887252..1887254,1887312..1887314, 1887321..1887323) /locus_tag="B565_1685" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99742" misc_feature 1887321..1887323 /locus_tag="B565_1685" /note="catalytic residue [active]" /db_xref="CDD:99742" gene 1887851..1889290 /locus_tag="B565_1686" /db_xref="GeneID:10487603" CDS 1887851..1889290 /locus_tag="B565_1686" /codon_start=1 /transl_table=11 /product="acetylornithine aminotransferase" /protein_id="YP_004392338.1" /db_xref="GI:330829386" /db_xref="GeneID:10487603" /translation="MTSMLAQGRDLRGRDLHDHKLHGRGRADSEGDINLGEGRARWWA GQSEDVRAGLAEDSRYFLHQALSTPCLDLLEGAQGSWLTSVSGKRYLDFHGNSVHQLG HGHPKVVAAVQQQLANLPFAPRRYTHQVAIDCARTLAELAPGDLNRVLFAPGGSEVVG IALKLARFITGNSKVVSLWDAFHGASLDAISVGGEACFRAGMGPLMAGVERIPPPTRY RGVWYRGEGDDLHYADYLEYVIEKEGGIGAFIAEPIRNTDVQVPSKAYWQRVREICDR HKVLLIVDEIPNALGRTGHWFSFEEFGIEPDIICLGKGLGGGVVPFAALITRDRFNQA AAISLGHYTHEKSPIGCAAALATIATIREEGLLAKAQEDGRFMAAELGKLAERHPLIG QVRGIGLLWALDLVVDHRSRTRNSQAAERLLYRCLELGLSFKVSQGNVIQLSPPLNIA RADLVRAITILDRALGEIALSLKQEHHHD" misc_feature 1887902..1889287 /locus_tag="B565_1686" /note="4-aminobutyrate aminotransferase; Provisional; Region: PRK06082" /db_xref="CDD:180390" misc_feature 1888010..1889245 /locus_tag="B565_1686" /note="Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase...; Region: OAT_like; cd00610" /db_xref="CDD:99735" misc_feature order(1888310..1888318,1888394..1888399,1888403..1888405, 1888604..1888606,1888700..1888702,1888706..1888711, 1888787..1888789) /locus_tag="B565_1686" /note="inhibitor-cofactor binding pocket; inhibition site" /db_xref="CDD:99735" misc_feature order(1888313..1888318,1888394..1888399,1888604..1888606, 1888700..1888702,1888709..1888711,1888787..1888789) /locus_tag="B565_1686" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 1888787..1888789 /locus_tag="B565_1686" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 1889283..1890122 /locus_tag="B565_1687" /db_xref="GeneID:10487604" CDS 1889283..1890122 /locus_tag="B565_1687" /codon_start=1 /transl_table=11 /product="phosphonoacetaldehyde hydrolase" /protein_id="YP_004392339.1" /db_xref="GI:330829387" /db_xref="GeneID:10487604" /translation="MTDLQIAVDPITDVEALILDWAGTVVDFGSFAPTSIFVEAFARA YDFPVTLDEARQPMGLGKWDHIAALGRLPSVDARWQARFGHPMSHAEVDHIYHTFMPL QIAAVTRFATPIPGVLPVLDALRVQGMKIGSCSGYPRPVMEALVPAAADHGYRPDHWV ATDDLKAGGRPGPWMALANVIELGVSAVHRCIKVDDAVPGISEGLNAGMWTVGLSVSG NEFGATWDEFAAMSEAEIAARRAPAEAKLRAAGAHYVIDTLADIAPVIADINRRLAAG ERP" misc_feature 1889316..1890119 /locus_tag="B565_1687" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" misc_feature 1889328..1889906 /locus_tag="B565_1687" /note="haloacid dehalogenase-like hydrolase; Region: Hydrolase; pfam00702" /db_xref="CDD:189678" gene complement(1890221..1890673) /locus_tag="B565_1688" /db_xref="GeneID:10487605" CDS complement(1890221..1890673) /locus_tag="B565_1688" /codon_start=1 /transl_table=11 /product="NTP pyrophosphohydrolase" /protein_id="YP_004392340.1" /db_xref="GI:330829388" /db_xref="GeneID:10487605" /translation="MIPIRCKAVSGVALTTVDGETKLLVMKRVKGDFWCHVAGTVEAG ETGWQTIIREFGEETGIRVTELYNGQYLEQFYEASLNTVEVVPVFVVYCPPNQAVTLN DEHTEYRWCSLAEAKALVSFPGQKALYDHIWHHFVDNAPSPLMRIDIR" misc_feature complement(1890266..1890652) /locus_tag="B565_1688" /note="Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly...; Region: Nudix_Hydrolase_36; cd04695" /db_xref="CDD:72930" misc_feature complement(1890491..1890559) /locus_tag="B565_1688" /note="nudix motif; other site" /db_xref="CDD:72930" gene complement(1890728..1891357) /locus_tag="B565_1689" /db_xref="GeneID:10487606" CDS complement(1890728..1891357) /locus_tag="B565_1689" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392341.1" /db_xref="GI:330829389" /db_xref="GeneID:10487606" /translation="MQLTLLNDSGKFDELDDTITHVFAETAHKLNSLFDLSQLDVTFS PFAEGDAPDSGIGGWAINMYRIELQLDLERPDIKEVIITELPAVLAHEVHHIVQKKNK VEAETLAENLIFEGLACYFEQRFNGGTLPSLFKESHHHDWQSLLAEMTPHLSSKQFNY LDFFYCRDNRPFPKYAGYWVGFNLVTNYLAKNGLNEIEVMGLPAEAYFN" misc_feature complement(1890740..1891210) /locus_tag="B565_1689" /note="Predicted Zn-dependent protease (DUF2268); Region: DUF2268; cl02316" /db_xref="CDD:154852" gene complement(1891449..1892654) /locus_tag="B565_1690" /db_xref="GeneID:10487607" CDS complement(1891449..1892654) /locus_tag="B565_1690" /codon_start=1 /transl_table=11 /product="formate-dependent nitrite reductase complex nrfG subunit" /protein_id="YP_004392342.1" /db_xref="GI:330829390" /db_xref="GeneID:10487607" /translation="MMCRSLACTLLALGMLLSATAYSSGVDTYQFRHPELQNRAQELA RALRCPQCQNQNLVESNSPIARDLRLEVYRWVDEGQSDEQVIARMTERFGDFVRYDPP FKSSTALLWGGPLLLLGQALLTLFRRLTRTKAQPIPVVKAIDESIHQPAADPRSELNL LIMHGEQAGLSPDQPLYRELSAARLANTIPAAELALRAQLASQHNNRGRNNRHGQALL LLGLLAIAAVAAVYLSTGRYQAWQDYASRPDPLAGLSPRDLQDKELGSLHQKLQRSPA DLDAWTALGQLYLYRGEYDNALLAYQRLALLEGGASAATQAAQATVLYYQAGQQLTSE ATRLLESALKQDAGEVSALMLLASDHFLHGRYSQAIALWQQLLDGERPRINRAALIEA IQTASIMGG" misc_feature complement(1892331..1892588) /locus_tag="B565_1690" /note="Cytochrome C biogenesis protein; Region: CcmH; cl01179" /db_xref="CDD:194063" misc_feature complement(1891521..1891820) /locus_tag="B565_1690" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(1891566..1891571,1891578..1891583, 1891590..1891595,1891677..1891682,1891689..1891691, 1891698..1891700,1891704..1891709,1891794..1891799, 1891806..1891811,1891815..1891820)) /locus_tag="B565_1690" /note="binding surface" /db_xref="CDD:29151" misc_feature complement(order(1891527..1891529,1891536..1891538, 1891548..1891550,1891584..1891586,1891629..1891631, 1891638..1891640,1891650..1891652,1891698..1891700, 1891743..1891745,1891752..1891754,1891764..1891766, 1891800..1891802)) /locus_tag="B565_1690" /note="TPR motif; other site" /db_xref="CDD:29151" gene complement(1892651..1893241) /locus_tag="B565_1691" /db_xref="GeneID:10487608" CDS complement(1892651..1893241) /locus_tag="B565_1691" /codon_start=1 /transl_table=11 /product="formate-dependent nitrite reductase complex subunit NrfF" /protein_id="YP_004392343.1" /db_xref="GI:330829391" /db_xref="GeneID:10487608" /translation="MRSRLRLFLPLLLTLGLGTLLWLGLGNNPYSQDDATLGRTLPAW QSDNLLDGSPIQTASLKGEPFVLNVWASWCANCRAEHPLLSELAATVPLYGLNYRDKG DAARAWLIQAGNPYRTVLADPDGKLALELGVYGTPETYLFDADGALLARHTGELTKGI WQCQFAPLLDKARADAQMNAATTAPAIAISARETQP" misc_feature complement(1892756..1893127) /locus_tag="B565_1691" /note="TlpA-like family, DsbE (also known as CcmG and CycY) subfamily; DsbE is a membrane-anchored, periplasmic TRX-like reductase containing a CXXC motif that specifically donates reducing equivalents to apocytochrome c via CcmH, another cytochrome c...; Region: TlpA_like_DsbE; cd03010" /db_xref="CDD:48559" misc_feature complement(order(1893011..1893013,1893020..1893022)) /locus_tag="B565_1691" /note="catalytic residues [active]" /db_xref="CDD:48559" misc_feature complement(1892876..1892944) /locus_tag="B565_1691" /note="central insert; other site" /db_xref="CDD:48559" gene complement(1893238..1895205) /locus_tag="B565_1692" /db_xref="GeneID:10487609" CDS complement(1893238..1895205) /locus_tag="B565_1692" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CcmF" /protein_id="YP_004392344.1" /db_xref="GI:330829392" /db_xref="GeneID:10487609" /translation="MLAELGYLSLLLAAALSLLQGTLPWLGLRLASPTLLRSATPLAL INAVLLLASLLLLASCFGQDDFTVSYVAQHANSALPLGFKLAAVWGGHEGSMLFFVFA LGLWGALVALCSRRVDPLITTRVLAIMGLIVGLFALYTLIFSSPFDRQFPGPLEGRDL NPMLQDIGLIIHPPLLYLGYVGFAVNFAFAMAALHSGRLDGAVAHWSRPWALGSWVFL TAGIVLGSWWAYYELGWGGWWFWDPVENASLLPWLLGTALLHALIVCEKRGAYGHAVL LLSIFTFALSLLGTFVVRSGVLTSVHAFAVDPSRGLTLLLLLGLLLTSALTLFALRAD IRAPYARFGLLSKEGLLGAAILLLCVACASVLLGTFYPMVFQSLHLGSLSVGAPYFNT IFVPLALCLMALMTQLPRLRWQQLAPHSRLNALLPPLFGLLGGGLISLAYLEQGSFVG SWIGILANMVSLWLIASLLLPLLQPTSLRELTLNRLGSLLAHLGVAVCALGIAQVSDH SQEGGTVLGANQPYQLGAFEFRYEGREPVIGPNYTAERITLSVHKNGKEVARLTPERR HYSVRTMNMNEPGIAWGMFGDLYVVLGEKMGPDAYAMRLHYKPLVRWIGFGGLLMMAG GTLRLLARRPLLASRSVAVRTSHQRLEQEAL" misc_feature complement(1893331..1895148) /locus_tag="B565_1692" /note="Cytochrome C assembly protein; Region: Cytochrom_C_asm; cl00504" /db_xref="CDD:186041" gene complement(1895380..1896333) /locus_tag="B565_1693" /db_xref="GeneID:10487610" CDS complement(1895380..1896333) /locus_tag="B565_1693" /codon_start=1 /transl_table=11 /product="formate-dependent nitrite reductase, membrane subunit" /protein_id="YP_004392345.1" /db_xref="GI:330829393" /db_xref="GeneID:10487610" /translation="MLHDAFHFPSLVWDWPIAIYLFLLGISAGATTLSVLLRRKGAGS ESGIIKATAILAPASVILGLLILIFHLARPWTFWKLMFHYQFDSVMSMGVMLFQLYMA VLFAWLAVVFRTEIERLRGHLFKEKFAFVDGLIGWLARIERLLAPLLLLLAVLLGAYT GFLLSALKTYPLLNNPVLPVLFLVSGISSGIASTILLAVTLFKENHHSQGVGFVHRFE RPVLAVEVLLLVCFFTGLYFGGGQKEVAMWAAIGSGFWAQVFWLGVVGIGMLLPQLLA LLTPAPLRERNGHLVLVCSLTLVGILLLRYFVLYAGQMTVV" misc_feature complement(1895383..1896324) /locus_tag="B565_1693" /note="Polysulphide reductase [Energy production and conversion]; Region: COG5557; cl01295" /db_xref="CDD:186416" misc_feature complement(1895386..1896321) /locus_tag="B565_1693" /note="Formate-dependent nitrite reductase, membrane component [Inorganic ion transport and metabolism]; Region: NrfD; COG3301" /db_xref="CDD:33110" gene complement(1896421..1897101) /locus_tag="B565_1694" /db_xref="GeneID:10487611" CDS complement(1896421..1897101) /locus_tag="B565_1694" /codon_start=1 /transl_table=11 /product="formate-dependent nitrite reductase, 4Fe4S subunit" /protein_id="YP_004392346.1" /db_xref="GI:330829394" /db_xref="GeneID:10487611" /translation="MSCSRRDFMAGMGAGALIMMTGPTRSLATPLAHSQTIDGIRYGM IHDETACIGCTACMDACREVNKVPEGVSRLEIIRSGPIGEFPDAEYRFFRKSCQHCDN APCVHVCPTGASHIRKKDGIVDVNADLCVGCMYCLAACPYQVRFINPVTRVADKCDFC RKTNLAAGKEPACVESCPTKALVFGNLDDPDSPISQRLVKETTYRYKQALGTSPKMYR VPKGEITS" misc_feature complement(1896424..1897098) /locus_tag="B565_1694" /note="cytochrome c nitrite reductase, Fe-S protein; Region: cyt_nit_nrfC; TIGR03149" /db_xref="CDD:163157" misc_feature complement(<1896586..>1896873) /locus_tag="B565_1694" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" gene complement(1897098..1897697) /locus_tag="B565_1695" /db_xref="GeneID:10487612" CDS complement(1897098..1897697) /locus_tag="B565_1695" /codon_start=1 /transl_table=11 /product="formate-dependent nitrite reductase, penta-heme cytochrome c" /protein_id="YP_004392347.1" /db_xref="GI:330829395" /db_xref="GeneID:10487612" /translation="MGDLTMDFLRLMLMAAMLLTSLQGQAAESAAAPVPATHEVEFLR NPDKACTDCHKEQSEGMHGKHGQATNPNNLKPVTCTNCHGQPSPQHREGVKDVMRFSH SLKDKESIKLYPISEQNGVCMSCHEPKPLREALWAHDVHATKLTCTSCHQLHPAKELM VGIPEKSRIKLCVDCHSKQHEASKARQEQSKPATGKEAS" misc_feature complement(1897125..1897589) /locus_tag="B565_1695" /note="cytochrome c nitrite reductase pentaheme subunit; Provisional; Region: PRK11659" /db_xref="CDD:183264" gene complement(1897749..1899185) /locus_tag="B565_1696" /db_xref="GeneID:10487613" CDS complement(1897749..1899185) /locus_tag="B565_1696" /codon_start=1 /transl_table=11 /product="Nitrite reductase" /protein_id="YP_004392348.1" /db_xref="GI:330829396" /db_xref="GeneID:10487613" /translation="MGSQHRHIKLGLAALLLTTSLGASGWALADDATTKGKIEARSEL FAKDHADQFTSWQATSESKERTDALAEDPNMVVLWGGYPFSKDYNKPRGHFYALTDVR ETLRTGAPKTAEDGPLPMACWSCKGPDVARVIDEQGEDGYFKGMWAKGGPEVVNTIGC ADCHDTASKEFKEGKPALHLSRPYADRAMTAIGKPFKEQGRFDQQSQVCGQCHVEYYF SGPTKAVKFPWDKGTTVEQMEAYYDEIGFADWTHALSKTPMLKAQHPEYETWRAGIHG QNNVACVDCHMPKVQNEQGKVYTDHKVGNPFDRFEQTCRNCHTQSKEMLQGIVKQRKE AVIETKLKVEKQLVHAHFEAKAAWDAGATEAEMKDILQDIRHAQWRWDYAIASHGVQM HAPEVALKVLGSALDKAADARTKLARLLASKGISHEIAIPDISTKEKAQAALGMDMKQ FNSDKAQFLKTTVPAWDAEAKAAGRLAQ" misc_feature complement(1897752..1899110) /locus_tag="B565_1696" /note="cytochrome c nitrite reductase subunit c552; Provisional; Region: nrfA; cl10556" /db_xref="CDD:187008" misc_feature complement(1897917..1899062) /locus_tag="B565_1696" /note="Cytochrome c552; Region: Cytochrom_C552; pfam02335" /db_xref="CDD:190282" gene 1900014..1910600 /locus_tag="B565_1697" /db_xref="GeneID:10487614" CDS 1900014..1910600 /locus_tag="B565_1697" /codon_start=1 /transl_table=11 /product="type I secretion target ggxgxdxxx repeat (2 copies) domain-containing protein" /protein_id="YP_004392349.1" /db_xref="GI:330829397" /db_xref="GeneID:10487614" /translation="MALQPGDRLQTAQGGHFQLAEPGSEPAGEQDMAAKPEPATPVAD GQPTDPELASLQEAIRQGIDPTELFQETAAGNAAAAGNIGGVAGSSSGGFVVVDRTND ATLAEAGFDTDHAVQPVGDELLFSEERDFFAAITITEPQTSDNIINADEAAGVIIRGV VDDVEVGQPVTVTLIDQAGNSLTVTTVVLPGLVWEANFGDVTGKLVDGPLQIVANTQD QAGNNASDTGQTLLDTITTITLDLADESDTGASQTDDLTRDNTPLLQGKGEPGATVTL SLGGSVLTVLTVDAAGNWQYQLPQTLADGQYQFQVNSVDIAGNRASDTLVINVDTQAS IDIDDLDTTALFGNSSATLSGSTSNVEAGQSVIITLVDSNGQPLLTTSALVGADGRWQ VSGLDLSGINQSFEVRASVTDLAGNSASDGAPLIGQSETLTLSEAGLAEGPITATGSL NTGAGQDGNLQVQFAADQSALEGLGLVSHGAPLGYTINGQTLTASAGGATVFTLTLNS DGSYRIVWSQSLDHGQDALRLPFNLEYRDSDGDLVKAPLVINLVDSNPPSFEIPAIPL TEDAFTNGAAVVGESSFVVKHTADPLLVDSLVFSNQSSTLTTLNGSGLASDGHQLTFE FADDRTLVGYYLDDSGQRVEVLRAELNAQQQGSDLAGRVVVTLTGPLDHQGSDTLSLG LQVSASEIDGDSTSANLTLTVNDGSDPALGIDKGVALQEGGNQSIDGQLPVTVGSDRL VSLNFEASQPALDGLTSQGKATSYEVQDNQLIVKDWQGKTILTVTIGLDGKYSVSLTG VFDEPEATNSLNLGLKVQGSDFDGDKSNLGTLNITITDGALPQVNPVSLMLTEDSNWQ QGQTLDGDLTITAGSDPLASITFDANQPGLQGFTSGKQAVTIAVADHRIEGRTPDGKL VFELTLGNDGKYSFTLHQPLDQGSADSLLKAGFTLLDSDGDKVFSTITVEVGDGANPT ISAVTGTTITEMAQGETAAVSTMSFSVTDGSDALDPNSLGFDIAAIQSTLTGLTSHGN PVTFAVDPATGQLVGTAGGQVVLRAELSLVDNNGNWSVTAKVTLSGELDHKGSESLNL PLAVTLADKDGDRIGTTLPLTTVDGKAPSFIPGKGVSLDEGDLTGSNSLSQTGHFDVQ AGSDRVVEVAFADASEQPALTALGKPVQYELVDGDPLIPGSQQLKGYVMVDGLRVEVF EVKLIGSLDQAGKNGFDYQVTLYQGLHQGANAVTELPIKVIVNDYDKAGGNNDSTSGT LNIQIGEGEKPTLTLTDVTLNEGRFDGANSATDDQQTSGKITIKADSDPVTDVRLTLS GQVMDTSGKPITHNGETLTWKAVGTDGHTFQAVTSGGLVVMTVSIPTVPATIAAHTSA EIGYQVTVHTNLDHGADNKLELTLPVEVIDSDGSKNQGTATITVTDGINPIISAIEPV RVEESDLDAVNGQHPGTTPAESGETDSGKVTITAGSDRVASLELDVAAFNQANHLTSG GKAVTLAAHSTGWYLATAEGGKPVFWVHLDVNGSYSVHLVGQLDHGAQGKDELTIEVP LFVTDHDGDRSPNVSVTVTVQDDMPIGTVLAHTLSEGSSTVTGDLLPTANEGADGARV ESITINGQTYAINGSLIQDVMSPDGKQVMGTLTISADGSYSFNPAAGFNHDASQLSQV VTAHLVDGDGDRANSTLTLNLQDEAVRFTVSAAIGNEDQGSQDPRLGIPINMQLDIGD FDRGEHVDQLLIQAPANAHGTFYYNGVALTTTADGKWFIVPPAAMVTSDNVHYTTQGV TFVPSSNWSSWSNGGQPLHFQVQLQVGVTEGAAPAAVTGDLAVTVRGVADKPMWDTAN TTRHYDTNEDSTGIKLDVKASLTDTDSSETLTYQIKLEAGRGTLMLNGVELQPNSSGI YTVSAGNINKVTVVPGKDFSGDIKLSVTPISTEKNPIAQGQGTAQGDKIDLVINVNPV ADDAKLTVRDIQGKEDTLLDLGSKIALAHLGDKLDGSEQMFVRISGLPDGATLLLGGS AVAQNIAGYYEVPFDRIGELKLQPPKNSNVDFDLIIKGVVKDTATLTDANGQPHTVVN EKETGSQTLHVDLVGVVDQPHFELGNTGWEAEGTGYATTVGEDGRAPLNFTLTSGEWV DTPHDTSESLNVVLQGLPEGARVFDANGKELTLTFAGLDAHGKPTYQVDVSDFGNLLI QPPHNSTADLNLIAKVVVTENDGDHKSFDVPLHIKVEPEIDATDYSKTSHGLEDQFTV LDWHPTLTDGAEKVTALSLSGVEDGYQIWLRVGGVESQLTVVSGKVTLTAAQLDSLLN GGQLLVKAPEDSDRDTNIQSHVTVTQHDVDSGAVAEKVIDGNLHVDIQAVVEPDGALT QSGGALVGQSGADIDLTGRFVFTDLDPSSVEEIDYLVINLPVLNGGAGDQFVVVGGIN NGNGSWIVPAGNLGSFKLHAPDGFVGKVEPIRIDAMVIDRGDDGDASSHVKVSLETSA EFENQPVTPKTPAATVDIDDNAVLVGKEDIRVDFGQQLKGVIHIGAADQASDEVTIVL KGLPAGVTISGAEYNISTGEYVIKVPPSLAGLEGLTLGLPQDFAGSLNIEVKVVNTDT ASGDIKVDSSTVRVDVAPVVDVNSGRGEHPELTLTVQDTNHDGQPDNLEDSEIHLDLS VKLADVSPSIAGGGLETVERVTITVDAKYGYFLDGSGKPVNTLVVNDVVALKDLVFVP KEHFSGHVPLDIKVDIVDTALVGGQQVTDSGSWSGQVGFEVRPVNDPAQLSVHSVTGS EDGTVNLAGFGATLIDNDGSEQIVALQIKGVPDGFTLSAPAVNNGGGVWQIPVGTDFS KLTLIPPADFSGTVELSLSAFTLDKGLTIPLETSGSFTVTVTPVGDALIADIQDQASG TEGDMITLDLGLETRDNQPTGGSAGNVHENKPEQVRVTIEGVPDGAEIRLPNGVAGTV VDLGGGRWQVTTEGGKLGAVELVTNDANGALDLKITAQSLDNGALGPEVNGTIHVEVS PVNDAPINVLPTTPQVAQEDQPFVIHGLQVKDVDAGNSPIKITLSVEHGTLTLPAGSG VTVVGNGTGSLVLTGTLADLNALLSGGVTYQGNSDFYGNDALTMVTNDQGNTGSGGAL SDTDVLPIEVQPVNDAPVNQLPGSMTVKEDGSLSLSGVSEKDVDAGSAPVSMVLRVEH GVLTLLGATGAVMVQGAGTREITLVGSLADLNQLLASNLHYEPVKDFWGEDTLTVTTS DQGNTGAGGPLSDTDQVTITVTPEPDMLGLTVDQHAFHALQGAVIPLGINASVVNPAT GELSIRISGLDGAQVQDEHGQIVGHADGNGDWLIPADHSVPLYFSGFGDGDHVLGISA ESSVGGSTVSTPLETITVHGQSGHELVGSDQGDWLFGSSGDDRLLGGHGNDILTGGAG SDLFVWQHGDEGSQGQPAIDTITDFHPELGDKIDLADMLQGVTGNGVDDLLKHLSASV TTGSNGLSDVNLSVSPAGDSQITQQITLKDVDLTSWNLTSTSSHDILQSMLEDQHSLI IQHP" misc_feature 1901355..1901735 /locus_tag="B565_1697" /note="T1SS-143 repeat domain; Region: T1SS_rpt_143; TIGR03660" /db_xref="CDD:132699" misc_feature <1902009..1902128 /locus_tag="B565_1697" /note="T1SS-143 repeat domain; Region: T1SS_rpt_143; TIGR03660" /db_xref="CDD:132699" misc_feature 1902198..1902521 /locus_tag="B565_1697" /note="T1SS-143 repeat domain; Region: T1SS_rpt_143; TIGR03660" /db_xref="CDD:132699" misc_feature 1902600..1902962 /locus_tag="B565_1697" /note="T1SS-143 repeat domain; Region: T1SS_rpt_143; TIGR03660" /db_xref="CDD:132699" misc_feature 1903002..1903430 /locus_tag="B565_1697" /note="T1SS-143 repeat domain; Region: T1SS_rpt_143; TIGR03660" /db_xref="CDD:132699" misc_feature 1903914..1904360 /locus_tag="B565_1697" /note="T1SS-143 repeat domain; Region: T1SS_rpt_143; TIGR03660" /db_xref="CDD:132699" misc_feature 1904403..1904831 /locus_tag="B565_1697" /note="T1SS-143 repeat domain; Region: T1SS_rpt_143; TIGR03660" /db_xref="CDD:132699" misc_feature 1910295..1910576 /locus_tag="B565_1697" /note="Peptidase M10 serralysin C terminal; Region: Peptidase_M10_C; cl12108" /db_xref="CDD:189247" gene complement(1910700..1911902) /locus_tag="B565_1698" /db_xref="GeneID:10487615" CDS complement(1910700..1911902) /locus_tag="B565_1698" /codon_start=1 /transl_table=11 /product="anaerobic glycerol-3-phosphate dehydrogenase subunit C" /protein_id="YP_004392350.1" /db_xref="GI:330829398" /db_xref="GeneID:10487615" /translation="MLLDHANQTFDQCIKCTVCTAYCPVAKANPAYPGPKQAGPDGER LRIKSPELFDSALKYCTNCKRCEVACPSGVRIGDIIAKAKHKYSGFKPGIREFVLSHT DLMGGMSTLMAPVVNFTTGLKPMKLVLDKALGVSSHRDLPKYSQGTFRGWYKKQKASQ AQYERQIAYFHGCYVNYNHPQLGKELVQVLNAMNIGMQLLEREKCCGVPLIANGFMDK AKQQAAFNIKQMENSLLGNEMPLLATSSTCGFTLRDEYPHLLEQDNHKVRDRISLVTR FLWNEFYKGNKPAMKPLNLHIAYHTPCHMEKMGGVIYTLELLRAIPGVKVTVLESQCC GIAGTYGFKSENYQTSQTIGEGLFDQINRLSPDLVITDCETCKWQIEMSTSFRCEHPI HLLAQALA" misc_feature complement(1910703..1911884) /locus_tag="B565_1698" /note="C subunit; Region: glycerol3P_GlpC; TIGR03379" /db_xref="CDD:132422" misc_feature complement(<1911642..>1911872) /locus_tag="B565_1698" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" misc_feature complement(1910760..1910948) /locus_tag="B565_1698" /note="Cysteine-rich domain; Region: CCG; pfam02754" /db_xref="CDD:111630" gene complement(1911954..1913219) /locus_tag="B565_1699" /db_xref="GeneID:10487616" CDS complement(1911954..1913219) /locus_tag="B565_1699" /codon_start=1 /transl_table=11 /product="anaerobic glycerol-3-phosphate dehydrogenase subunit B" /protein_id="YP_004392351.1" /db_xref="GI:330829399" /db_xref="GeneID:10487616" /translation="MKFDNIVIGGGMAGLSAALRLVEAGQKTLLMASGQSALHFSSGS VDLLESEGDPRAALPAFMAAHPDHPYSKVGMQNIEASLADLQRHCAEQGLPLVRHDTN HQRLTPIGTLKRTWLSPDTCACVTDAPIPDVLLLATLEGFRDFHPALAAANLATHPRF AHCRILTGEIRLPQLAEFSRNPHEFRSADIARLCDKHHLVADLAREISRMVQESGVPG CRHIVLPACLSLGLVGPRLAELEQRTGCTIKEVATMPPSLIGMRMQEALKRRFMALGG TFLTSERVLGARYEGDRVVGVHTQNGDDQLFEADNFVLASGSFFSRGLESRLRGIREP IFDADVLSLEERDAWAGRRLFDHHPFMGFGVKTDDKLRVLRGGKPLTNLYGAGSVLAH YDPIREGSGSGVAVATGWQAAGHILSSAQ" misc_feature complement(1911957..1913219) /locus_tag="B565_1699" /note="anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated; Region: PRK05329" /db_xref="CDD:180019" misc_feature complement(1911969..1913213) /locus_tag="B565_1699" /note="Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]; Region: GlpB; cl10040" /db_xref="CDD:189211" gene complement(1913209..1914882) /locus_tag="B565_1700" /db_xref="GeneID:10487617" CDS complement(1913209..1914882) /locus_tag="B565_1700" /codon_start=1 /transl_table=11 /product="anaerobic glycerol-3-phosphate dehydrogenase subunit A" /protein_id="YP_004392352.1" /db_xref="GI:330829400" /db_xref="GeneID:10487617" /translation="MKRITTQVVIIGGGATGAGIMRDCALRGIDCILLERDDIAAGTT GRNHGLLHSGARYAVTDQESARECIQENRILKRIASHCVEDTGGLFLTLPEDDINFQT TFMDACALAGIETRQLDPGEALRMEPNANPAMIGAIHVPDGTVDPFRLAAANVLDAKE HGARIFTHCKVLGLLRTQDRVHGVKAINTRTGEAFEVECQEVINAAGIWGQQICEYAD LGIRMFPAKGSLLIMDYRINQLVLNRARKPADADILVPGDTISLIGTTSSRIDYNKID QLTVEPEEVEVLLREGIKLAPIMARTRLLRAYAGVRPLVAVDGDDTGRNISRGIVLLD HAERDGLKGFNTITGGKLMTYRLMAEWATDLLAKKLGNSKPCQTAELSLPGSRDPEKV SAPGLSVPVEGSAQYRHGERVIAFFRDNPKANALICECEMVTAGEIEYALRELDVDNL IDLRRRTRLGMGPCQGELCAYRAAGLMQEYGKADGRQACVMLRQFLEERYKGTRPVLW GDALREAEFTYWIYEGLFGLGEWTAPQLVADTPRGSTSETTHKESRHEV" misc_feature complement(1913266..1914822) /locus_tag="B565_1700" /note="sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional; Region: glpA; PRK11101" /db_xref="CDD:182963" misc_feature complement(<1914175..1914789) /locus_tag="B565_1700" /note="Malate:quinone oxidoreductase (Mqo); Region: Mqo; cl14881" /db_xref="CDD:196842" gene complement(1915125..1915511) /locus_tag="B565_1701" /db_xref="GeneID:10487618" CDS complement(1915125..1915511) /locus_tag="B565_1701" /codon_start=1 /transl_table=11 /product="SEC-C motif domain-containing protein" /protein_id="YP_004392353.1" /db_xref="GI:330829401" /db_xref="GeneID:10487618" /translation="MADTPEQLMRSRYSAFVLGLGEYLVHSWHPAHLGGLTAEELSRI DTRWDGLEIIASQGGPEDETGMVEFKAWFLEGDERHCLHERSRFVRYQGRWVYTEGEQ DPAPLKTGRNDPCPCGSGKKHKKCCG" misc_feature complement(1915209..>1915508) /locus_tag="B565_1701" /note="SEC-C motif; Region: SEC-C; cl12132" /db_xref="CDD:196349" gene 1915704..1917371 /locus_tag="B565_1702" /db_xref="GeneID:10487619" CDS 1915704..1917371 /locus_tag="B565_1702" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004392354.1" /db_xref="GI:330829402" /db_xref="GeneID:10487619" /translation="MTLKQKILLLGAVPVLLMALVVNLSNYMVSKRDLESDLVVAREN AIKERKALLSSYIMMAKTAVDAVYSLPDSPENRQKVKELLRPLRYSSDGYFFVYDFEG NTILLPVRTELEGKNRWNDKDAKGKLLIQEILKSARQGDGFTEYWTAKPSIGRDAPKL AFTLVLDKYQWAIGTGFYIDDIDNELAALRAERESNMHASLQSSVLVILLILGITLAA TVIVGNRVTKPLADAVLALNDIANGDGDLTQRLKVQSQDEIGQLASAFNRFVERIQSV VSQVGETSNHLFSAVDKLHHLSEHYDHQMQGHSRETDQVVTAVTEMSSTAQEVAASAS NAATATSDAARESDAARGVVSGAINSINRLVGEVHTASGVIEQLAQETAKIGSVVEVI RGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGRTQQSTKEINEMLQRLQG GVKQAVEVMQASEDRSQETVQEASHIASSLDSMVMAVSTINDMNIQIATAAEEQHAVS EEINKNLVAIQQIVSELTSAAVESNSTTRDLASTGDKLRKLVSQFRY" misc_feature 1915704..>1916294 /locus_tag="B565_1702" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: COG4564" /db_xref="CDD:34202" misc_feature 1915827..1916096 /locus_tag="B565_1702" /note="Cache domain; Region: Cache_2; pfam08269" /db_xref="CDD:149365" misc_feature 1916379..1916525 /locus_tag="B565_1702" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cd06225" /db_xref="CDD:100122" misc_feature order(1916379..1916384,1916391..1916396,1916400..1916405, 1916412..1916417,1916421..1916423,1916475..1916480, 1916484..1916489,1916496..1916501,1916505..1916510, 1916517..1916522) /locus_tag="B565_1702" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100122" misc_feature 1916628..1917365 /locus_tag="B565_1702" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 1916802..1917365 /locus_tag="B565_1702" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 1917516..1918715 /locus_tag="B565_1703" /db_xref="GeneID:10487620" CDS 1917516..1918715 /locus_tag="B565_1703" /codon_start=1 /transl_table=11 /product="Mlc protein" /protein_id="YP_004392355.1" /db_xref="GI:330829403" /db_xref="GeneID:10487620" /translation="MKGSIDLIRQLNYGLVYASLEEHKELSRTDLSRLTGLSPASITK ITRELLDGGLVVTCGESSVGRGRRQTLLRINERRFQFLSMRLGRGYVDMALFDFSGRS LARQRHLFTEEERADLLGSLVHAIKVFLPRKSLSLACIALCLPGQVERHSGMVKHFPF YDLRNWPLGPTLQQAFSVPVLVSGDVRTWIQAEREWGAAKNCADAVLVFVHNDIGVGM VVNGQLIESENALLGDLSHLQLEPYGQRCYCGGFGCACTLVTNQALEAQYRDLRERMQ EHDLPESVTIRELCELALAGNSLCQDILHQAAGRLSKVLSNLICLLNPGKLLLGGEIT RADRLLFPMLHQSLASQLPAEYLVRLQIESTHFYEDPTKPTSVQVHKALRDGSLLLEL LRSCQES" misc_feature 1917735..1918613 /locus_tag="B565_1703" /note="Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]; Region: NagC; COG1940" /db_xref="CDD:32123" misc_feature 1917762..1918307 /locus_tag="B565_1703" /note="FGGY family of carbohydrate kinases, N-terminal domain; Region: FGGY_N; cl09121" /db_xref="CDD:195797" misc_feature <1918155..1918592 /locus_tag="B565_1703" /note="FGGY family of carbohydrate kinases, N-terminal domain; Region: FGGY_N; cl09121" /db_xref="CDD:195797" gene 1918889..1919644 /locus_tag="B565_1704" /db_xref="GeneID:10487621" CDS 1918889..1919644 /locus_tag="B565_1704" /codon_start=1 /transl_table=11 /product="DTW protein" /protein_id="YP_004392356.1" /db_xref="GI:330829404" /db_xref="GeneID:10487621" /translation="MKPVPDHAVNRLRAWRKSISTRPFLARGGTLARCPACQLREDWC ACEWRPELKAEAGFCLLMYDSEPMKPSNTGRLIADVLPDTTWAFLWSRTQPHPELLAL LADPAWQPYVVFPACEKEPARLTGEVALAPGKRPLFILLDGTWPEARKMFNKSPYLDG FPVLAIKPDTLSTYGMRVANCDEHLCTAEVAACVLEVAGELKAGQALQHWFNLFSSRY MAGRVSRFPGADEDHLCEALAAIKEANVASTAC" misc_feature 1918904..1919554 /locus_tag="B565_1704" /note="DTW domain; Region: DTW; cl01221" /db_xref="CDD:154271" gene 1919847..1920623 /locus_tag="B565_1705" /db_xref="GeneID:10487622" CDS 1919847..1920623 /locus_tag="B565_1705" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392357.1" /db_xref="GI:330829405" /db_xref="GeneID:10487622" /translation="MELELVTLFALFGVALVAGFIDAIAGGGGLLTVPALLATGMPPA LVLGTNKLQSSFGSFSATWFYARKGLLEWAMIWPAVICTFIGAAIGTLAVQTIDAAIL ERLLPFLLMAFACYFYFSPRVSDAESSRRLTPMLFALLVGGGVGFYDGFFGPGTGSFF AIGFVALAGFGMARATAHTKLLNFTSNIASLLFFALGGKVVWSVGFCMALGQFIGARF GSKMVLKKGVKLIKPLLVTVSLLMSAKLVWSQYPELFAWI" misc_feature 1919868..1920620 /locus_tag="B565_1705" /note="Predicted permeases [General function prediction only]; Region: COG0730; cl00498" /db_xref="CDD:186038" misc_feature 1919934..1920584 /locus_tag="B565_1705" /note="Sulfite exporter TauE/SafE; Region: TauE; pfam01925" /db_xref="CDD:190162" gene complement(1920700..1921566) /locus_tag="B565_1706" /db_xref="GeneID:10487623" CDS complement(1920700..1921566) /locus_tag="B565_1706" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004392358.1" /db_xref="GI:330829406" /db_xref="GeneID:10487623" /translation="MLLEGLETLSLLASEGTMAKVASRLYISQSAVSKRIAQLEQRLG KKLIEPEGRQIRLTPQAKELLERVAPSLAEMKGVLADSQDLADQSPLPIACSETLLAG YLAHFMRDYLERDPHLALSTHHTPVILARVRSGDALLGICAGRLPPGHGLDADLLLEE PFYLVGETQQSLPPASAESRRKILTMDLENPSNRYLREPLADMGLEPAMELDSYLALI ELAKAGIGPVLLPAGLLGLVGEQGEMARPLPGLGRPLHLVYRPNSLKRERIARLVSAL HQHFRHCSDTPR" misc_feature complement(1921381..>1921515) /locus_tag="B565_1706" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(<1920901..1921290) /locus_tag="B565_1706" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cd05466" /db_xref="CDD:176102" misc_feature complement(order(1920901..1920903,1920907..1920912, 1920928..1920945,1921201..1921203,1921204..1921215, 1921219..1921221,1921231..1921233,1921240..1921245, 1921249..1921254)) /locus_tag="B565_1706" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene complement(1921636..1922553) /locus_tag="B565_1707" /db_xref="GeneID:10487624" CDS complement(1921636..1922553) /locus_tag="B565_1707" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="YP_004392359.1" /db_xref="GI:330829407" /db_xref="GeneID:10487624" /translation="MNLMLYLATVLIWGSTWIAIAWQLGPIPIEVSVLYRFLLAAVAL FALLAASGRFPRLPWHGQRYAALLGALLFSTNFLCFYHATRYIPSGMSAVIFASASIF NGLNLWLFERKRPTLRWLQGSLLGLFGTLLLFWPVLADAQLGANGWKGLLLACGGTLC FSLGNLVSARGQRHGYHVLQLVPWGMVYGVVLLLGWVTLLGQQLVVPTDGHYLAAMVY LALFGSVIAFTAYLTLVGRIGASKASYATVLFPLVALTLSTFYEGFVWQPVSVAGVVI SLIGNLVIFAPPLSEWRIRPAKAANDTCS" misc_feature complement(1921708..1922361) /locus_tag="B565_1707" /note="Carboxylate/Amino Acid/Amine Transporter; Region: 2A78; TIGR00950" /db_xref="CDD:162128" misc_feature complement(1921699..>1921917) /locus_tag="B565_1707" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene 1922727..1923605 /locus_tag="B565_1708" /db_xref="GeneID:10487625" CDS 1922727..1923605 /locus_tag="B565_1708" /codon_start=1 /transl_table=11 /product="helix-turn-helix protein" /protein_id="YP_004392360.1" /db_xref="GI:330829408" /db_xref="GeneID:10487625" /translation="MKTAGVFDALVSTGARLEDACWLEPGLGVASWRNCYDQTRYHKP GHHTLSVYLQGGEQTERLDGPGGHGGTGKVCIMPDHHRSEWLVREEFRFFHLYFTPAH LTRIAEEVCDKEGRHLQLVDKTFIDDPQAASLVQRQLMQLQWQHGVDRLALSHGAWML ILHAYRHHTEEAPGLPPLRGGLAPVVIKRVQEYLQAHLADSVTLAELAQQAGLSEYHF ARMFGQSLGCPPHRYLLGLRLKRAKQLLAGPEPLASIASQCGFSSQAHFGNRFREAFG LTPGQWRAQLSSSRHR" misc_feature 1923306..1923431 /locus_tag="B565_1708" /note="Bacterial regulatory helix-turn-helix proteins, AraC family; Region: HTH_AraC; pfam00165" /db_xref="CDD:143933" misc_feature 1923330..1923575 /locus_tag="B565_1708" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:128636" misc_feature 1923453..1923575 /locus_tag="B565_1708" /note="Bacterial regulatory helix-turn-helix proteins, AraC family; Region: HTH_AraC; pfam00165" /db_xref="CDD:143933" gene 1923868..1925505 /locus_tag="B565_1709" /db_xref="GeneID:10487626" CDS 1923868..1925505 /locus_tag="B565_1709" /codon_start=1 /transl_table=11 /product="putative ATP-dependent endonuclease of the OLD family" /protein_id="YP_004392361.1" /db_xref="GI:330829409" /db_xref="GeneID:10487626" /translation="MFLERIEVKGFRGINRLSLGLDQTTVLIGENTWGKSSLLRALWC LLGQDAEPYQFTAEDFHQPEDPELAPARHLQLVLTFSEHRPQMCQHSRRLARLCPSWV LHKDKFHRIHYRASAELQADGSVLTIHDFLDGVGKSLPIANTHELVCLLITMNPVFRL RDARTARNGVETLQWGDLSEHRLSELADKLIDEPQRIGEPELKEALQAVRQLMDHYFN ALAPIKNKPRSQRDIINRPMTLRNPGNLHTLLRHADNRTLQLAMAGMAATLLQARGNR ELEEGARPIMILEDPESRLHPTMLALAWGLLEQLPGQKLLTTNSGDLLSSLPLNQVRR LVRRQQDILCHQLGGERYSSDDLRKIAFHVRINRPMSLFARCWLLVEGETEIWLLSEL AQICGYSLRAEGVRIIEFAQCGQSPLIKVARDFGIEWHLLTDGDEAGLKYATSARGQL KGERERDRLTQLPAADIEHYLYHNGFEAVFRREAGVGGRAMWSASHIINKAIHHRSKP GMALAVVEEAERLGAEHIPPVIRQMFARVVALARGQG" misc_feature 1923868..1925496 /locus_tag="B565_1709" /note="Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]; Region: COG3593" /db_xref="CDD:33393" misc_feature 1923868..1924980 /locus_tag="B565_1709" /note="Protein of unknown function (DUF2813); Region: DUF2813; pfam11398" /db_xref="CDD:192752" misc_feature 1924981..1925271 /locus_tag="B565_1709" /note="TOPRIM_OLD: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in bacterial and archaeal nucleases of the OLD (overcome lysogenization defect) family. The bacteriophage P2 OLD protein, which has DNase as well as...; Region: TOPRIM_OLD; cd01026" /db_xref="CDD:173776" misc_feature order(1925008..1925013,1925020..1925022,1925167..1925169, 1925173..1925175) /locus_tag="B565_1709" /note="putative active site [active]" /db_xref="CDD:173776" misc_feature order(1925008..1925010,1925167..1925169) /locus_tag="B565_1709" /note="putative metal-binding site [ion binding]; other site" /db_xref="CDD:173776" gene 1925704..1926423 /locus_tag="B565_1710" /db_xref="GeneID:10487627" CDS 1925704..1926423 /locus_tag="B565_1710" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392362.1" /db_xref="GI:330829410" /db_xref="GeneID:10487627" /translation="MFVQLPFWLFPLTGLMALGALIALGIVLWLGDICPGQRSRISQQ LFSIWVITALSLMLAVEAKAASWLIWSGGAALVLGVGLSLAQSRLEGKRSVPSTLLWL PALPLALYGIGLLQLQGWVSGLLQMAMLGAAFAHLMLLRARHRLKAFNTLLPLAGLVG AMASLVWLAVLVGWQGDEANLDALIPAVVTQAALLVASLLLWFSPLYLQRDTAPVVVS TSLCGLLIAQIAATSVLHQLI" gene complement(1926518..1928581) /locus_tag="B565_1711" /db_xref="GeneID:10487628" CDS complement(1926518..1928581) /locus_tag="B565_1711" /codon_start=1 /transl_table=11 /product="glycogen debranching enzyme GlgX" /protein_id="YP_004392363.1" /db_xref="GI:330829411" /db_xref="GeneID:10487628" /translation="MRISAGHCRQLGATPDSNGVNFAIWARLASRVELLLFASADDAT PEVIPLSPRLNRTAYYWHIHVEGISVGQRYAYRIQGPWRPYGGTRFDAEKVLLDPYGR SIELGANYDRWAAARPGSNLACCAKNKVVDTRHYDWEGDKLPAHSLSRSVIYELHLGG FTKSPSSGVDPALRGTYLGLIEKIPYLQSLGVTAVELLPVFQFDPQDAPKGLSNYWGY SPMSFFAPHAQYACGDDPLTEFRDMVKALHKANIEVILDVVYNHTAEGGDDGPTFSCR GIDNEAYYILDNNQKDTNYSGCGNTFNGAHPVVLRMIMDSLHFWRQEMHVDGFRFDLA AILSRDESGQPQANAPTLRTIDTDPNIADIKLIAEAWDAGGLYQVGSLAGARWREWNG QFRDDVRRFLRGDDNSVTAFVERLCGSPDIYHYHHADPEKSINFVTCHDGFTLWDWAS YNSKHNEANGEENRDGCDHNFSWNHGHEGVTEDPQINALRMRQAKNMMVATLLSVGSP MLLMGDELLRTQRGNNNGYCQDNATCWMNWLPNARSQEMFRFMKELIQYRKHLFQRPE QESMPLSLTEILRHSEICWHGVNAGQPDFSPHSHAIAMSALSSETKLALYVLFNAYWE PLTFNLPSPPKGVGGYWRRILDTALPSPQDICTFGMPLEGLTREYLAQPRSSCLFICG ADDFY" misc_feature complement(1926539..1928569) /locus_tag="B565_1711" /note="glycogen debranching enzyme GlgX; Region: glgX_debranch; TIGR02100" /db_xref="CDD:131155" misc_feature complement(1928201..1928548) /locus_tag="B565_1711" /note="Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase...; Region: Isoamylase_N_term; cd02852" /db_xref="CDD:48635" misc_feature complement(<1927580..1928059) /locus_tag="B565_1711" /note="Alpha amylase, catalytic domain; Region: Alpha-amylase; cl07893" /db_xref="CDD:164103" gene 1928778..1928854 /locus_tag="B565_t045" /db_xref="GeneID:10487629" tRNA 1928778..1928854 /locus_tag="B565_t045" /product="tRNA-Met" /db_xref="GeneID:10487629" gene 1928949..1929025 /locus_tag="B565_t046" /db_xref="GeneID:10490030" tRNA 1928949..1929025 /locus_tag="B565_t046" /product="tRNA-Met" /db_xref="GeneID:10490030" gene 1929114..1929190 /locus_tag="B565_t047" /db_xref="GeneID:10490031" tRNA 1929114..1929190 /locus_tag="B565_t047" /product="tRNA-Met" /db_xref="GeneID:10490031" gene 1929362..1930861 /locus_tag="B565_1712" /db_xref="GeneID:10490032" CDS 1929362..1930861 /locus_tag="B565_1712" /codon_start=1 /transl_table=11 /product="cytosol aminopeptidase family" /protein_id="YP_004392364.1" /db_xref="GI:330829412" /db_xref="GeneID:10490032" /translation="MITPFTYLPPAIESRDATLAEALAQGLPLQLLLIAEEQKESLLS LPALAGLQTQLALGKKAPFTLMHGNTLLQVMFVAGSVTRDHRLYKQIRGWIAPLSGLN VERLGLHLEGFSPSERVMLAEVMLSALLAANISLPTSKRRSESSWSYQQIKVSPAVVL DLARLYSEAGGNGLARHLAVLPASELTAASYREFVSKLAQDEGWQCHHYDQAQLAELG AGAFLAVARGSEDNQGAMVKLSYYPPKPVRRIALVGKGICHDSGGYNLKVSGSMYGMH LDMGGSAVALGALYAISRAQLPYEVHCWLAIAENHIGPHAYRPGEVVTAINGTSIEVV DTDAEGRMVLADTLAMAVQDTPDLLLDYATLTGACKRALGSRYSGVFTNRSEWMTSLV NLGQRSGERVWPFPLDDDYDDNIESEWADLLQCAPGSSPDHIDAARFLAHFVPEQTPW LHFDLSGFRNKGGNGVVSSEVTGFGVRLTLDLLASPLGRVGRQASEQSE" misc_feature <1929776..1930810 /locus_tag="B565_1712" /note="Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein...; Region: Peptidase_M17; cd00433" /db_xref="CDD:48344" misc_feature order(1929899..1929901,1929905..1929913,1930043..1930045, 1930052..1930054,1930136..1930138,1930154..1930156, 1930169..1930171,1930178..1930180,1930187..1930192, 1930286..1930288,1930292..1930303,1930307..1930309, 1930313..1930327,1930343..1930345,1930349..1930351, 1930361..1930363,1930469..1930483,1930490..1930492, 1930568..1930573,1930577..1930579,1930592..1930594, 1930598..1930603,1930616..1930618,1930622..1930624, 1930652..1930657,1930661..1930663,1930766..1930768) /locus_tag="B565_1712" /note="interface (dimer of trimers) [polypeptide binding]; other site" /db_xref="CDD:48344" misc_feature order(1930124..1930126,1930139..1930141,1930160..1930162, 1930193..1930195,1930370..1930372,1930376..1930378, 1930382..1930384,1930454..1930456) /locus_tag="B565_1712" /note="Substrate-binding/catalytic site; other site" /db_xref="CDD:48344" misc_feature order(1930124..1930126,1930139..1930141,1930193..1930195, 1930370..1930372,1930376..1930378) /locus_tag="B565_1712" /note="Zn-binding sites [ion binding]; other site" /db_xref="CDD:48344" gene 1930876..1931556 /locus_tag="B565_1713" /db_xref="GeneID:10487630" CDS 1930876..1931556 /locus_tag="B565_1713" /codon_start=1 /transl_table=11 /product="HAD-superfamily hydrolase" /protein_id="YP_004392365.1" /db_xref="GI:330829413" /db_xref="GeneID:10487630" /translation="MKQPSYDWVLFDLDETLLDFPVASALTHTLQIYGVQADDASMAQ YHALNHGLWQQYNDGEIDATALQQTRFSLFAQQVAADPMAMNNTFLEQIIALSMPLEG VVETLQQLRSKVRMGIITNGFSVPQRGRLGKLGWSEWFEPLVISDEIRVTKPAPAIFQ HTLSLMGQPDPARVLMVGDNPKTDIAGAAAQGLATCWYNPARQAGECDATHEIHHFAH LADIVLGR" misc_feature 1930885..1931544 /locus_tag="B565_1713" /note="Predicted hydrolase (HAD superfamily) [General function prediction only]; Region: COG1011" /db_xref="CDD:31215" misc_feature 1931170..1931466 /locus_tag="B565_1713" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature 1931233..1931235 /locus_tag="B565_1713" /note="motif II; other site" /db_xref="CDD:119389" gene complement(1931674..1932393) /locus_tag="B565_1714" /db_xref="GeneID:10487631" CDS complement(1931674..1932393) /locus_tag="B565_1714" /codon_start=1 /transl_table=11 /product="family 3 extracellular solute-binding protein" /protein_id="YP_004392366.1" /db_xref="GI:330829414" /db_xref="GeneID:10487631" /translation="MGWVDWQPFSYRNEQQQLRGLDVELLNAIFLRAGYQAKFNEMPW ARVLHELKFGTVQLTMSANITAERQQYARFSHPYREEETAIIIRRQDVERWRGITTLE QLINTPDFHIGVLKGFDYGNTFRLLMARHELQPRLQMRLRLDQLLKMLQGGRIQGFIL DPHGLQGWQGKDEAQDQLHTLLRIEVTPVHLMLSKESTTEAQLQRINQAIDQLKQSPD YQQILDRYQFRSLHSQENTHK" misc_feature complement(1931716..1932381) /locus_tag="B565_1714" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature complement(1931716..1932372) /locus_tag="B565_1714" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature complement(order(1931911..1931913,1932037..1932039, 1932190..1932192,1932262..1932264)) /locus_tag="B565_1714" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature complement(order(1931932..1931934,1931962..1931964, 1931974..1931976)) /locus_tag="B565_1714" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature complement(1931818..1931835) /locus_tag="B565_1714" /note="hinge residues; other site" /db_xref="CDD:29040" gene complement(1932555..1932923) /locus_tag="B565_1715" /db_xref="GeneID:10487632" CDS complement(1932555..1932923) /locus_tag="B565_1715" /codon_start=1 /transl_table=11 /product="DksA-type zinc finger protein" /protein_id="YP_004392367.1" /db_xref="GI:330829415" /db_xref="GeneID:10487632" /translation="MTQAQLTVWRNRLLSDWAQVRETLIGQLKACRRDEWAEQVGHCE QDQLVELTSRLDLPKVEQSVARLKRIDAALCQMDLGLYGLCSDCEEPLSIEQLEQDPT LQRCPRCETRYRKGFHAHEL" misc_feature complement(<1932588..1932911) /locus_tag="B565_1715" /note="Prokaryotic dksA/traR C4-type zinc finger; Region: zf-dskA_traR; cl00755" /db_xref="CDD:193930" gene complement(1933021..1933965) /locus_tag="B565_1716" /db_xref="GeneID:10487633" CDS complement(1933021..1933965) /locus_tag="B565_1716" /codon_start=1 /transl_table=11 /product="tRNA-dihydrouridine synthase C" /protein_id="YP_004392368.1" /db_xref="GI:330829416" /db_xref="GeneID:10487633" /translation="MRVILAPMQGVLDHLMREVLTSVNDYDLCVSEFIRVVDQLLPAK VFYRLCPELLQDGKTRAGTPVRVQLLGQHPEWLAENALRAIELGSPGVDLNFGCPAPT VNKSKGGAVLLKEPETIYRIVKAVREAVPAHLPVSAKIRLGYDDKDLYLENAQAVFQG GANELAVHARTKREGYKAPAHWEYVDAIRRALPIPVTANGEIWDHKDALACARVSGCD ALMVGRGAISLPNLANVMKTGCPHMSWAEVLQLMVSYTEQDLASEKADYYPSRIKQWF SYLKREYPEADLLFQEIRVLKETDPIRDALLQAAKSHS" misc_feature complement(1933048..1933965) /locus_tag="B565_1716" /note="tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]; Region: COG0042" /db_xref="CDD:30391" misc_feature complement(1933255..1933962) /locus_tag="B565_1716" /note="Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and...; Region: DUS_like_FMN; cd02801" /db_xref="CDD:73368" misc_feature complement(order(1933294..1933299,1933363..1933365, 1933369..1933371,1933462..1933464,1933549..1933551, 1933681..1933683,1933762..1933764,1933867..1933869, 1933942..1933950)) /locus_tag="B565_1716" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73368" misc_feature complement(order(1933294..1933296,1933363..1933368, 1933453..1933458,1933462..1933467,1933543..1933545, 1933549..1933551,1933669..1933674,1933762..1933764)) /locus_tag="B565_1716" /note="active site" /db_xref="CDD:73368" misc_feature complement(order(1933456..1933458,1933462..1933464, 1933543..1933545,1933672..1933674)) /locus_tag="B565_1716" /note="catalytic residues [active]" /db_xref="CDD:73368" misc_feature complement(order(1933363..1933368,1933453..1933455, 1933465..1933467,1933549..1933551,1933669..1933671)) /locus_tag="B565_1716" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73368" gene 1934089..1934466 /locus_tag="B565_1717" /db_xref="GeneID:10487634" CDS 1934089..1934466 /locus_tag="B565_1717" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392369.1" /db_xref="GI:330829417" /db_xref="GeneID:10487634" /translation="MKRWCLMALGWLAFATGIVGIVLPLLPTTPFMLLAAALFARSSP RFHRWLLTHPWFGPPIVDWQQYRGIRRQARRRAIIFILLTFSVSLAVVPLLWVKGLLV VIMVILLTWLMRLPVLEPVAMVK" misc_feature 1934089..1934448 /locus_tag="B565_1717" /note="Protein of unknown function (DUF454); Region: DUF454; cl01063" /db_xref="CDD:186315" gene 1934601..1935146 /locus_tag="B565_1718" /db_xref="GeneID:10487635" CDS 1934601..1935146 /locus_tag="B565_1718" /codon_start=1 /transl_table=11 /product="adenine phosphoribosyltransferase" /protein_id="YP_004392370.1" /db_xref="GI:330829418" /db_xref="GeneID:10487635" /translation="MNPETLKFIEASIKTIPDYPKPGILFRDITSLIENAEAFKATID LLANHYRDQGITKIVGTEARGFIFGAPVAYAMGLGFVPVRKPGKLPREVIEESYALEY GTDTLQLHTDAIVPGDKVLVVDDLLATGGTVDATVKLIRRAGGEVADAAFIISLPSLG GDARLTAAGIKVVSLVELAGE" misc_feature 1934610..1935140 /locus_tag="B565_1718" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene 1935388..1937925 /locus_tag="B565_1719" /db_xref="GeneID:10487636" CDS 1935388..1937925 /locus_tag="B565_1719" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunits gamma and tau" /protein_id="YP_004392371.1" /db_xref="GI:330829419" /db_xref="GeneID:10487636" /translation="MLTALTNALDQGRLHHAYLLSGTRGVGKTTIARILAKSLNCEQG ISSHPCGVCDTCREIDQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPARGRFKVYLI DEVHMLSRHSFNALLKTLEEPPPYVKFLLATTDPQKLPITILSRCLQFHLKSLDQTQI AKQLEWVLDQEGQPFEPRALLALAKAADGSMRDALSLTDQALAHGNGSVRLESVLAML GTLDHRHLHQLLEAILRQDAPATMAKITEIATLGPDFDQLHAELEGLLHRIAMAQLLP ACVQEQGADADSLLQLAKAMSPEEVQLCYQIVLGGRKDLPWAPDGRTALEMTCLRMLA FSPRRDALHPASLTALPPSMTSSAASSATPVASLPGKRPAAESAAVAPISGAVPAPLA SPVASTPVATSAVPAVDVSLPAMTDDIGNPADSEEEAQAVELFSQQDELLREAAGMGY QPEPALPHVQPDVSAHSVAQPADADEQASAAAYADHSRGESLTASIEPALEPTATPVS APEAVSAVSSMQSLLGKRNMLRSRQRGQDAPAAPAPRAVPVAPAKPVAPAAAPVVTQQ SAPVSQPTGQGMATMGHYDDLPPVDLYGDGYEPQGDNGEYEEYLNQGFAGQTPVMSHA PVTAPAQPTDLPPWDLDGQPSYRPGERSAAAPAVTPAPATQPPVATTAVAATPVTQDE PVQPVMETIDWDELESDSEPQEGEATRLIPSSLLNGCGDAWAELIAHTQVGGRLRQLA INSVMTREGDKVLLTLKPEQRHLVSDKARADLAEIIGPALGQPVQVEVTLGVVPDKET PLEIEHRLYLGVREQVTRDLEQDPNVQFLVQRFGAVLHHESIEPLNR" misc_feature 1935388..1935828 /locus_tag="B565_1719" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 1935394..1936386 /locus_tag="B565_1719" /note="DNA polymerase III, subunit gamma and tau; Region: dnaX_nterm; TIGR02397" /db_xref="CDD:162839" misc_feature 1935451..1935474 /locus_tag="B565_1719" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(1935454..1935477,1935694..1935696,1935787..1935789) /locus_tag="B565_1719" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 1935682..1935699 /locus_tag="B565_1719" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature <1935727..1936020 /locus_tag="B565_1719" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 1935823..1935825 /locus_tag="B565_1719" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 1936012..1936398 /locus_tag="B565_1719" /note="DNA polymerase III subunits gamma and tau domain III; Region: DNA_pol3_gamma3; pfam12169" /db_xref="CDD:152604" misc_feature 1937548..1937907 /locus_tag="B565_1719" /note="DNA polymerase III tau subunit V interacting with alpha; Region: DNA_pol3_tau_5; pfam12170" /db_xref="CDD:152605" gene 1938040..1938369 /locus_tag="B565_1720" /db_xref="GeneID:10487637" CDS 1938040..1938369 /locus_tag="B565_1720" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392372.1" /db_xref="GI:330829420" /db_xref="GeneID:10487637" /translation="MFGKGGMGNLMKQAQQMQERMQKAQEQLAQMEVTGEAGAGMVKV TMTGSHSVRRIEIDPSLMEDDKELLEDLVAAACNDAVRRVEEQNKAKMGELTGGMQLP PGFKMPF" misc_feature 1938046..1938354 /locus_tag="B565_1720" /note="Uncharacterised BCR, YbaB family COG0718; Region: DUF149; cl00494" /db_xref="CDD:186034" gene 1938490..1938690 /locus_tag="B565_1721" /db_xref="GeneID:10487638" CDS 1938490..1938690 /locus_tag="B565_1721" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392373.1" /db_xref="GI:330829421" /db_xref="GeneID:10487638" /translation="MGAMLARAGSNYPFWGEVATAKADYAMKRSALYRRRYLSIPAIG YPGLAWPGGIGIMAACRIEEIV" gene 1938687..1939529 /locus_tag="B565_1722" /db_xref="GeneID:10487639" CDS 1938687..1939529 /locus_tag="B565_1722" /codon_start=1 /transl_table=11 /product="putative endonuclease" /protein_id="YP_004392374.1" /db_xref="GI:330829422" /db_xref="GeneID:10487639" /translation="MKYIGAHVSAAGGVENTIARAQAIGANAFALFTKNQRQWQAAPL SDATIRAFKAACDKAGFLPEQILPHDSYLINLGHPDPDGLAKSRDAFLDEMKRCEQLG LCYLNFHPGSHLKQIPEAASLKLVSESINWALERSEGVTAVIENTAGQGTNLGWSFEH LATIIEGVEDKSRVGICFDTCHAFAAGYDLRTAESCAAVFAEFDRTVGFHYLKGMHIN GAKCTFGSRVDRHHSLREGNLGEAVFHHIMNDERFDRIPLILETIDESIWGEEISWLR SLAK" misc_feature 1938687..1939526 /locus_tag="B565_1722" /note="endonuclease IV; Provisional; Region: PRK01060" /db_xref="CDD:179214" misc_feature 1938696..1939520 /locus_tag="B565_1722" /note="AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-...; Region: AP2Ec; cd00019" /db_xref="CDD:28903" misc_feature order(1938705..1938707,1938780..1938782,1938900..1938902, 1939467..1939469,1939488..1939490) /locus_tag="B565_1722" /note="AP (apurinic/apyrimidinic) site pocket; other site" /db_xref="CDD:28903" misc_feature order(1938789..1938803,1938900..1938905,1938909..1938911, 1938918..1938920) /locus_tag="B565_1722" /note="DNA interaction; other site" /db_xref="CDD:28903" misc_feature order(1938891..1938893,1939011..1939013,1939119..1939121, 1939221..1939223,1939230..1939232,1939332..1939334, 1939371..1939373,1939377..1939379,1939467..1939469) /locus_tag="B565_1722" /note="Metal-binding active site; metal-binding site" /db_xref="CDD:28903" gene complement(1939625..1940530) /locus_tag="B565_1723" /db_xref="GeneID:10487640" CDS complement(1939625..1940530) /locus_tag="B565_1723" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004392375.1" /db_xref="GI:330829423" /db_xref="GeneID:10487640" /translation="MKLTLQQLKVFATIARYGNLGLAANELCLSKGAVSQSLQELERQ LSTPLFDRIHPRLQLNNEGRLLQPAAEELLTRMQDIENLFSPDAEPSGQLRLGASQTI GNYLLPTLLASSKQELGLPPKVTINNTHLLCHALANFELDMALIEGENHHPDLLAEPW LQDEMLVVAPPGHPLANKKELSLSRLGGETWVLREAQSGSREQFIQQIQPELPRWQPG LELNTLEAVMLAVEKGLGISFISRLAASDRLADGRLLALPLSRRFPRQLSLIWHKQKY HSTSLRHFIHFCRAQVKDAEVSRAE" misc_feature complement(1939658..1940530) /locus_tag="B565_1723" /note="putative DNA-binding transcriptional regulator; Provisional; Region: PRK10837" /db_xref="CDD:182768" misc_feature complement(1940339..1940518) /locus_tag="B565_1723" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(1939667..1940254) /locus_tag="B565_1723" /note="C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold; Region: PBP2_CysL_like; cd08420" /db_xref="CDD:176112" misc_feature complement(order(1939832..1939837,1939841..1939846, 1939862..1939879,1940153..1940173,1940186..1940188, 1940195..1940200,1940204..1940209)) /locus_tag="B565_1723" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176112" gene 1940633..1941625 /locus_tag="B565_1724" /db_xref="GeneID:10487641" CDS 1940633..1941625 /locus_tag="B565_1724" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate transporter/malic acid transport protein" /protein_id="YP_004392376.1" /db_xref="GI:330829424" /db_xref="GeneID:10487641" /translation="MIARTRKSLAAAPTPMAGLALGIASLGWCWENAGHFDGRMQLLG AAIAAVLLVILTFKFLLHPRLLLQDLAHPVVGSVVPTYAMGTMVVSKALGMIAPQAGE ALWLFAVAVHLLFLATFIWHRAKEFEIHHMVPSWFVPPVGIIVADVAFPGGQFAPLAN GLLWFGIICYGLMLPLMLYRLIFSHEVPDAAKPTIAILAAPASLSLAGYLTVSQEPSL LLVAVLLGIAILMTGIIYLAFIKLLRLPFSPGYAAFTFPLVIGATALFKVAHLVEGFA QGSHYVEQIRLLAHFELGVATVIVGYVALRYLMFFLPQRNTEMNNGMARQGAHR" misc_feature 1940669..1941556 /locus_tag="B565_1724" /note="C4-dicarboxylate transporters of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family; Region: TDT_C4-dicarb_trans; cd09325" /db_xref="CDD:187765" misc_feature 1941398..1941400 /locus_tag="B565_1724" /note="gating phenylalanine in ion channel; other site" /db_xref="CDD:187765" gene 1941848..1942870 /locus_tag="B565_1725" /db_xref="GeneID:10487642" CDS 1941848..1942870 /locus_tag="B565_1725" /codon_start=1 /transl_table=11 /product="lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase 1" /protein_id="YP_004392377.1" /db_xref="GI:330829425" /db_xref="GeneID:10487642" /translation="MQHHFFARPQYMSSQDPVFDSSFEARFLHPRYWFSWLALGVLML LAFVPVRLRDRLAEALAPLVFRISKKQIYIARTNLEICFPDKSPEERDAIALTSIRVG LKSLLGFGEFTMRSQRYLMSRMQVIGWEHIEAERTAGRPVILVVPHTWPVDAAGYCFT QRGVPMCTMMKRARNPVFDWHLNRARAKNGCRVYERSAGIKAVIRTIKSGRSFFYLPD QDHGREKSIFAPFFGYPKATLPALPRLVQVSGAKAVPLLACYDEANHCYRLEIEAPFD NYPTEDVMADTCRMNDMVQQQLMRHPGQYMWFLKIFDTREDQEGLDGLYEAGIQRIRK GLSPHG" misc_feature 1941932..>1942147 /locus_tag="B565_1725" /note="lipid A biosynthesis lauroyl acyltransferase; Provisional; Region: PRK05906" /db_xref="CDD:168292" misc_feature 1942214..1942783 /locus_tag="B565_1725" /note="Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like; Region: LPLAT_LABLAT-like; cd07984" /db_xref="CDD:153246" misc_feature order(1942289..1942291,1942298..1942300,1942304..1942306, 1942355..1942366,1942502..1942510) /locus_tag="B565_1725" /note="putative acyl-acceptor binding pocket; other site" /db_xref="CDD:153246" gene 1943021..1944016 /locus_tag="B565_1726" /db_xref="GeneID:10487643" CDS 1943021..1944016 /locus_tag="B565_1726" /codon_start=1 /transl_table=11 /product="lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase 2" /protein_id="YP_004392378.1" /db_xref="GI:330829426" /db_xref="GeneID:10487643" /translation="MAAMSALDPVFDTSFHSRLLHPKWWGSWCALGLLSLLAFTPARL RDRFADLVSPTLLRFSKKQAYIADTNLKICFPELDAAARQALLLKSIRVGLKTFMGFG ELSWRSKARLTRRIKVTGWEHVQAEQAAGRPVILVVPHTWAVDMIGRYFSMMGIEMCT MMKSPKDQVFDWYINRERAKGGKVYERSAGIKPAIKSIRAGASFFYLPDQDHGREASV FVPFFGRPKATLPALPKLVKLTGARAVPIFASYDEDEGCYLLEIEPPFGPYPTADLLA DVNAMNRVVEMQVARHPEQYMWFLKIFETLEHQEGDDGLYEAGIQRIRQGLPPEP" misc_feature 1943360..1943929 /locus_tag="B565_1726" /note="Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like; Region: LPLAT_LABLAT-like; cd07984" /db_xref="CDD:153246" misc_feature order(1943438..1943440,1943447..1943449,1943453..1943455, 1943504..1943515,1943648..1943656) /locus_tag="B565_1726" /note="putative acyl-acceptor binding pocket; other site" /db_xref="CDD:153246" gene 1944212..1945072 /locus_tag="B565_1727" /db_xref="GeneID:10487644" CDS 1944212..1945072 /locus_tag="B565_1727" /codon_start=1 /transl_table=11 /product="serine/threonine protein kinase, RI01 family" /protein_id="YP_004392379.1" /db_xref="GI:330829427" /db_xref="GeneID:10487644" /translation="MKIPNRIQPLVDDGLVDEVVSRLMSGKEADVYVVRCGDEIRCAK VYKEASKRSFKQAVVYQEGRKVRNSRSARAMEKGSKYGRKQHEEVWQNTEVDALFKLA AAGVRVPQPYVCLDGVLLMELITDEDGNVAPRLNDVALTPEQAVIDHHKVIRYVVRML CAGLIHGDLSEFNVLVDEQGPVIIDLPQVVDAAANNQAKAMLERDVNNMRNYYGMYAP ELLKTRYAQEMWALFEDGKLTPESELTGHFEESRAAIDLDSVLQEIESAEEEAYARQA RMKAEQEDSY" misc_feature 1944278..1944853 /locus_tag="B565_1727" /note="RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein...; Region: RIO1_like; cd05145" /db_xref="CDD:88275" misc_feature order(1944278..1944283,1944293..1944298,1944302..1944304, 1944338..1944340,1944341..1944343,1944347..1944349, 1944536..1944538,1944572..1944583,1944602..1944604, 1944611..1944613,1944728..1944730,1944734..1944736, 1944761..1944766) /locus_tag="B565_1727" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:88275" gene complement(1945133..1945654) /locus_tag="B565_1728" /db_xref="GeneID:10487645" CDS complement(1945133..1945654) /locus_tag="B565_1728" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_004392380.1" /db_xref="GI:330829428" /db_xref="GeneID:10487645" /translation="MLALQCRPAKLADAPAYRRYVTECAEDGQPLYQVAQFDPDGWLQ SLLDHAKGRNLPSGYLPTTTYFALDGEEIIATLRLRHGDNEATRQWLGHIGYETRPSR RGEGAATVLLRWVQQQVLTAPVLISCDQDNLASRKVITAAGGVLLGRRFHPGNCNWLE MYQLAPSPSPSRP" misc_feature complement(1945193..1945654) /locus_tag="B565_1728" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(1945660..1946898) /locus_tag="B565_1729" /db_xref="GeneID:10487646" CDS complement(1945660..1946898) /locus_tag="B565_1729" /codon_start=1 /transl_table=11 /product="GGDEF domain-containing protein" /protein_id="YP_004392381.1" /db_xref="GI:330829429" /db_xref="GeneID:10487646" /translation="MPSLFSSAQLLSLVLFVTLSHVGVATIFAAMWHTHRQIRALIYW SAGELVIAGAFCCLLLRPLEGNASLANILCTNLLLMSTTLLYERGMRHFFRREADQLG WLLPAVTLGGFVLFALTALQQPLFDVHSRIIVLSGVLSLQIALLIWQLWRYQRLAPVY RVLRFTILLLGLQLLLQLLRIAKHLWQPELAANSFTDPLLGPVILLSLLFTIARSYLL LSLVHTRQQQALLATQRKLERRANQDELTGLFSRHYFERQVALRARDVRSPSQLLLID LDNFKQINDRHGHPAGDAMLRAVGRVIANTLPSEGMAGRLGGDELALLLMADPQTLPD YCHSLQQQIAEATRELAGGPISLSIGLTSLHPDEGFEAAYLRADQALYAAKQAGRQRA CVQELHHNEPQPLQPCALLS" misc_feature complement(1945720..1946175) /locus_tag="B565_1729" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(1945942..1945944,1946071..1946073)) /locus_tag="B565_1729" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(1945939..1945950,1945954..1945956, 1946020..1946022,1946032..1946034,1946044..1946049, 1946056..1946058)) /locus_tag="B565_1729" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(1945885..1945887,1945966..1945968)) /locus_tag="B565_1729" /note="I-site; other site" /db_xref="CDD:143635" gene complement(1947162..1947656) /locus_tag="B565_1730" /db_xref="GeneID:10487647" CDS complement(1947162..1947656) /locus_tag="B565_1730" /codon_start=1 /transl_table=11 /product="YbaK/prolyl-tRNA synthetase domain-containing protein" /protein_id="YP_004392382.1" /db_xref="GI:330829430" /db_xref="GeneID:10487647" /translation="MAIYSLLDQLAIPYQRIDHPPVFTCEEASKLLPDLPAAKTKNLF LRDPKSERLFLVVSPEEHRVDLKALAAMLGVKRLSFGSPERLDAVLGLTPGSVTLLAM VRDREKAVELVVDEAIWQAEQVQCHPLVNTATLIIRLNDVRRLLTHLDREAIVMRLPA ATCD" misc_feature complement(1947189..1947653) /locus_tag="B565_1730" /note="This CD includes bacterial (Agrobacterium tumefaciens and Caulobacter crescentus ProX, and Clostridium sticklandii PrdX) and eukaryotic (Plasmodium falciparum N-terminal ProRS editing domain) sequences. The C. sticklandii PrdX protein, a homolog of the...; Region: PrdX_deacylase; cd04335" /db_xref="CDD:88586" misc_feature complement(order(1947276..1947278,1947369..1947374, 1947534..1947536)) /locus_tag="B565_1730" /note="putative deacylase active site [active]" /db_xref="CDD:88586" gene 1947823..1950249 /locus_tag="B565_1731" /db_xref="GeneID:10487648" CDS 1947823..1950249 /locus_tag="B565_1731" /codon_start=1 /transl_table=11 /product="DNA polymerase" /protein_id="YP_004392383.1" /db_xref="GI:330829431" /db_xref="GeneID:10487648" /translation="MTATQPTVPATPPLDGFILTRHGRDVRGRNGQPATTEIVMWLWS AQGPVRVVVPGQEPVFFLPQSHMAEAAELFKGAGVSGRFRRLPMHTFDGRPVVGCYFA TLSAFHRAIELLLIRGLEHFEADIRLPERFLMERFITAGVRFDGRAVKKGGKQGYWEV NEARCAPQAVTPTLSWVSLDVECAMDGALFSVGLYSEQDARVIMIGTPEADAESWGTQ VQWVEDESALLSALESWFSLHDPDLVIGWNVVNFDFRLLLRRAELNKRRLRLGRGREL CFWRSSRGDPQTGNVIIPGRMVLDGIDTLKSATWQFASYSLDAVASELLGRGKDIEDV ANRGEKITELFHSDKEALARYNLEDCKLVWEIFDYCHLIPFAIERASLTGLELDRVGG SVAAFTNLYLPRLHRGGYVAPNLPADGGLASPGGYVMDSKPGLYRHVLVLDFKSLYPS IIRTFCIDPMGLIEGLQHPEHAIPGFRGAMFSRERHFLPELIATLWAARDRAKAASNK ALSQAIKIIMNSFYGVLGSGGCRFYDPRLASSITLRGHSIMQQTREWIEAKGFEVIYG DTDSTFVHLGRETSPDEADEIGQRLAKMINDNWAALIRREFDLPSYLEIQYETHYRRF LMPTIRGLEKGSKKRYAGLVGKASEGSEQLVFKGLESVRTDWTMLAKQFQTRLYELVF HDEDPSGYVRTMVDETRAGRHDDLLIYRKRLRQKLEEYQKNVPPHVRAARLADEENLR RGLPQRYQHRGSIAYLMTLNGPEPLEYRRSAIDYEHYIDKQLRPIADAILPFIGESFD RICGQQLDLF" misc_feature 1947862..1950246 /locus_tag="B565_1731" /note="DNA polymerase II; Reviewed; Region: PRK05762" /db_xref="CDD:180243" misc_feature 1948336..1948926 /locus_tag="B565_1731" /note="DEDDy 3'-5' exonuclease domain of Escherichia coli DNA polymerase II and similar bacterial family-B DNA polymerases; Region: DNA_polB_II_exo; cd05784" /db_xref="CDD:99827" misc_feature order(1948360..1948371,1948561..1948566,1948573..1948581, 1948768..1948773,1948885..1948887,1948897..1948899) /locus_tag="B565_1731" /note="active site" /db_xref="CDD:99827" misc_feature order(1948360..1948362,1948366..1948368,1948579..1948581, 1948885..1948887,1948897..1948899) /locus_tag="B565_1731" /note="catalytic site [active]" /db_xref="CDD:99827" misc_feature order(1948363..1948371,1948561..1948566,1948573..1948578, 1948768..1948773,1948885..1948887,1948897..1948899) /locus_tag="B565_1731" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:99827" misc_feature 1949083..1950204 /locus_tag="B565_1731" /note="DNA polymerase type-II subfamily catalytic domain. Bacteria contain five DNA polymerases (I, II, III, IV and V). DNA polymerase II (Pol II) is a prototype for the B-family of polymerases. The role of Pol II in a variety of cellular activities, such as...; Region: POLBc_Pol_II; cd05537" /db_xref="CDD:99920" misc_feature order(1949149..1949151,1949158..1949166,1949317..1949319, 1949365..1949367,1949377..1949379,1949527..1949529) /locus_tag="B565_1731" /note="active site" /db_xref="CDD:99920" misc_feature order(1949521..1949523,1949527..1949529) /locus_tag="B565_1731" /note="metal-binding site" /db_xref="CDD:99920" gene 1950324..1950575 /locus_tag="B565_1732" /db_xref="GeneID:10487649" CDS 1950324..1950575 /locus_tag="B565_1732" /codon_start=1 /transl_table=11 /product="DNA-damage-inducible protein I" /protein_id="YP_004392384.1" /db_xref="GI:330829432" /db_xref="GeneID:10487649" /translation="MRLEIIIDRKHQIPTSTMEALRQELLKQLGEKFPDIHVRVAPGS AMALTVSRASKEDKELAEAMVQEVWENADSWMPEENVAS" misc_feature 1950324..1950560 /locus_tag="B565_1732" /note="DinI-like family; Region: DinI; cl11630" /db_xref="CDD:187111" gene complement(1950752..1951615) /locus_tag="B565_1733" /db_xref="GeneID:10487650" CDS complement(1950752..1951615) /locus_tag="B565_1733" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392385.1" /db_xref="GI:330829433" /db_xref="GeneID:10487650" /translation="MSFAATPFGATRFIATLVMTSLGRAARPRSSSHGLLALLLLLAG HSARADERWQSDSYLVESFMAIAMEREYGEARQTRFARWQQPIRLQLINESGDKPLQA DVVKVQAAHLARITGHSISMVAAKPNLTLIMTDYSKMKSWANRTMGGDPSVKMALKEG LCLANFATNAKHEISRATIIIPVDYSRAKGRFLDCVVEEFTQVMGLPNDSDKVFPSIF NDNSIDSFLTGLDYVLLKMAYHPALKAGMSSDEIRAALPIALADLRAKGEIREANRRV QQQSLKSWAGL" misc_feature complement(1950842..1951453) /locus_tag="B565_1733" /note="Protein of unknown function (DUF2927); Region: DUF2927; pfam11150" /db_xref="CDD:151593" gene complement(1951642..1952145) /locus_tag="B565_1734" /db_xref="GeneID:10487651" CDS complement(1951642..1952145) /locus_tag="B565_1734" /codon_start=1 /transl_table=11 /product="YgjP protein" /protein_id="YP_004392386.1" /db_xref="GI:330829434" /db_xref="GeneID:10487651" /translation="MAELTYLGGYPDPLKAQVQQLIAAGKLGEMLAKRYPESHQIQSD KALLVYTMELKNRYLKSSAPLSKVVFDGKINVIKDALGLHTYVSRVQGSKLKAKNEIR IAALFKEAPSPFLKMIVVHELAHIKEKAHNKSFYQLCQHMEPDYHQLEFDLRLWLTWR DIDKANR" misc_feature complement(1951681..>1952145) /locus_tag="B565_1734" /note="Protein of unknown function DUF45; Region: DUF45; cl00636" /db_xref="CDD:153902" gene complement(1952290..1953933) /locus_tag="B565_1735" /db_xref="GeneID:10487652" CDS complement(1952290..1953933) /locus_tag="B565_1735" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392387.1" /db_xref="GI:330829435" /db_xref="GeneID:10487652" /translation="MNHSIRFTPPRVNPGIKPAIVLLTALLALLFCLRNPLFHAMAPG FDASLFAVMGKMWSEGGVLYRDMIDIKGPMIFALDALGYRMGGFVGIWALEWALCWLG LLASWQAFAQLGLSFKARLGAMLAVLALYGTRYYYGNMTEDWTFHLALIAQWAFITLL LDKGFRWWPALVAALTFAIVAWMRTNNGAFWGAWYLVLFCHWCLHEKWRDAILLLISS LLGLALIGGPLYAYFQQHDLLAAFKYYAFDIFFEGSYGNGFSPMVGAVGLLRTGLIML LPAFIILMLSRRQEWYLPALLATLFGVLFTLIANSVSGHVFDHYDVLYLQLAVLPLAV LLDRSEQQADAIGLLCISLVVLTASWLLAQQLAFGWSTKEWSLERVNEVLGTSLLWAL PVLILIPLWRAWDVRSATPWLATLAMLLLMINNAWEGTLKGRPFNPAAQVRVDRIKAE TVPSDKIWVDGIQPQYYLWTDRQPASAYLFFANVNPPYDVRERVLADIQRQNPKFIIA KPDRVSEELKKPSTPSHLAFYQYLTSHYEEVDPGLYRRR" gene complement(1954123..1955769) /locus_tag="B565_1736" /db_xref="GeneID:10487653" CDS complement(1954123..1955769) /locus_tag="B565_1736" /codon_start=1 /transl_table=11 /product="putative 5'-nucleotidase" /protein_id="YP_004392388.1" /db_xref="GI:330829436" /db_xref="GeneID:10487653" /translation="MSITVQLAHFSDCHSHFDGAPMSFSPVGEGQWRTQCGGYARILT RLTQLRAKAAAAGQRFLFLHGGDSFQGSLYFNRFKGRANADLLAMLAPDAMVLGNHEF DLGNGPLVEFLRQLDFPVLAANLDNSQEPADTPLGLWDIPHLYDAHQPWHRQVIDGVP FALLGITLAQMAAIANPDPHTRFHAVADTLTRVLREIKREGIQHIVLLSHLGLDQDKL LAERFPELSLIIGGHTHSLLGDLAPLGLPSEGSYPLMNNGVAILHAGHSALCLGVCEL TFDESGRVVQSQGQLEWLPWQPWPFPSTPPAGLTFCEPDPQLEQHLAKRYRPEIETMS QRIVTRLAAPLPHQRLPDATLPHGSQLAPLVARAMLTAAREQVGEVDFALHNAGGVRC SLEPGPLSEADIAGRLLPFAIPLTLYRVHGHELAEALENAIDNATNNGVVGNGNGSFP YTAGVRFTYQADRPKGQRITRLEWEAAPSQWQAVNAEQVYRGVSSAYTASGKEGYTAL ARTLTQHNQELGITLADAFIRWARHLPTLEAQPPLVEYIH" misc_feature complement(1954165..1955745) /locus_tag="B565_1736" /note="NAD pyrophosphatase/5'-nucleotidase NadN; Region: nadN; TIGR01530" /db_xref="CDD:130593" misc_feature complement(1954903..1955745) /locus_tag="B565_1736" /note="metallophosphatase superfamily, metallophosphatase domain; Region: MPP_superfamily; cl13995" /db_xref="CDD:196777" misc_feature complement(order(1955071..1955073,1955140..1955142, 1955470..1955475,1955569..1955571,1955728..1955730, 1955734..1955736)) /locus_tag="B565_1736" /note="active site" /db_xref="CDD:163614" misc_feature complement(order(1955071..1955073,1955140..1955142, 1955473..1955475,1955569..1955571,1955728..1955730, 1955734..1955736)) /locus_tag="B565_1736" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163614" misc_feature complement(1954243..1954695) /locus_tag="B565_1736" /note="5'-nucleotidase, C-terminal domain; Region: 5_nucleotid_C; pfam02872" /db_xref="CDD:190457" gene complement(1955861..1957213) /locus_tag="B565_1737" /db_xref="GeneID:10487654" CDS complement(1955861..1957213) /locus_tag="B565_1737" /codon_start=1 /transl_table=11 /product="anaerobic C4-dicarboxylate transporter" /protein_id="YP_004392389.1" /db_xref="GI:330829437" /db_xref="GeneID:10487654" /translation="MLELIVGTLVTLVVGRAIFKGYSATGVLLSGGLLLLVITAMMGK PVLPSKVVSTGYIATDIFEYVRFLLNDRGGGLGMLIMVLCGFAGYMSHIGANTILVKL ASKPLGIIKSPYILLVAAYLVACAMSLAVSSATGLGVLLMATLFPLMVNMGISRGAAA AVCASPAAIILAPTSGDVVMAAQAANMPLLDFAFKLTLPISLVAIACMAVTHFFWQRY LDQKSGEHNEPVAPGDLVTTAPAFYAILPFTPIIGVLVFDGKWGPQLDIVTIIVMCMV LASLLELVRIRNGKELLDGLQVCWRNMADAFAGVVMLLVGAGVFAQGLMTIGFIDTLL AHAQDLGSGGLIMMLSLVVITTLAAFTTGSGNAPFYAFVELIPNLASSLGINPAYLVI PMLQASNLGRTISPVSGVVVACAGMGKLSPFEVVKRTSMPVAVGLLVVIVATQIMVPA " misc_feature complement(1955864..1957213) /locus_tag="B565_1737" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature complement(1955867..1957168) /locus_tag="B565_1737" /note="C4-dicarboxylate anaerobic carrier; Region: DcuC; pfam03606" /db_xref="CDD:112424" gene 1957550..1957873 /locus_tag="B565_1738" /db_xref="GeneID:10487655" CDS 1957550..1957873 /locus_tag="B565_1738" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392390.1" /db_xref="GI:330829438" /db_xref="GeneID:10487655" /translation="MAPHSYGVLVVAEGNRPRFAALASKTTEANCLARHAIRVDGVAL LVTPRFYAKEGKRGLCELWLNEGADQDFFANRLKNDHFIQIDGHDINVKNYHLDWQRI SRHAQ" gene 1958057..1958653 /locus_tag="B565_1739" /db_xref="GeneID:10487656" CDS 1958057..1958653 /locus_tag="B565_1739" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392391.1" /db_xref="GI:330829439" /db_xref="GeneID:10487656" /translation="MVSKVYGVVGVGLLLLPLMSQAQPSRPQVVPASRINVRFYEVNA TSPEQLARAIAQSAPKVNGKPVLGKASYQVDWQLDTEQLPGRCQLNRVTVTTNATVLL PRWRQSANSNDPARQRWGRLLSSMFDYESRFKEMVLQGANQVGGAIAGLPGHADCQAL RYAAWAAGSGELNKVKGRLDGFQRQTGYGEQLGVHWPK" misc_feature 1958171..>1958539 /locus_tag="B565_1739" /note="Bacterial protein of unknown function (DUF922); Region: DUF922; cl02415" /db_xref="CDD:194306" gene complement(1958749..1960518) /locus_tag="B565_1740" /db_xref="GeneID:10487657" CDS complement(1958749..1960518) /locus_tag="B565_1740" /codon_start=1 /transl_table=11 /product="FAD-dependent cmnm(5)s(2)U34 oxidoreductase" /protein_id="YP_004392392.1" /db_xref="GI:330829440" /db_xref="GeneID:10487657" /translation="MQAFLEQAPQSGNGSRLHFISFEKYPLTQDDLRKALAAWPELGH LSQDLVAQWPLPVSGCHRLHFAGGRIRLDLWFGDIKDMLPQVPHRAEGLVDAWYLDGF SPAKNPEMWTQELFEGLARLARPDCSIATFTCAGFVRRGLIAAGFAMKKVKGHGSKRE MLVGDRTNKQPQQTIAPWYARPAGRAGEVVIIGGGIASAMTALSLVERGRKVTLLCAD GEPATGASGNRQGALYPLLNGEHDALSRFYSLAFGYARQRLLALAERHPIAFALCGVT QLGYDDKSAAKLAKMSQGPFPSELMHPLSTAEVEQVVGLPCGHSGVSYPQGGWLCPAD LTRAAIKEAQASGLLEVVFKTEVVAIAEQADGWQVESQDGRHWQAPNLVVAAGHQLPA LLPFAELPLYPVRGQVSHVPTTASLRQLSTVLCYDGYLTPMHNDQHCIGASYGRNQSS LEFRAEEQIQNQVRLQVCLPEQTWPAEVDVSDNEARVGVRCASRDHLPVVGPVARLQG LADHYAQLQHDQHNAQPLPLHPGLYVLGALGSRGLCSAPLCGELLASEICGDPLPLAA DLLEALHPARYWVRKLLKGKALV" misc_feature complement(1959988..>1960500) /locus_tag="B565_1740" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" misc_feature complement(1958839..1959924) /locus_tag="B565_1740" /note="Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:31009" misc_feature complement(1958782..1959918) /locus_tag="B565_1740" /note="Malate:quinone oxidoreductase (Mqo); Region: Mqo; cl14881" /db_xref="CDD:196842" gene 1960870..1962069 /locus_tag="B565_1741" /db_xref="GeneID:10487658" CDS 1960870..1962069 /locus_tag="B565_1741" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] synthase I" /protein_id="YP_004392393.1" /db_xref="GI:330829441" /db_xref="GeneID:10487658" /translation="MITGIGVISSIGNNKEEVLASLKAGKSGITYSEQFEQHNLRSRV WGNIKLDPSELIDRKVMRFMGDAAAYAYLSMQQAIADAGLAEDQVSNERTGLVVGSGG ASGKNTSESVDIAREKGVKRVGPYMVPRTMSSTTSACLATPFQIKGVNYSISSACATS AHCIGHALELIQLGKQDVVFAGGGEELDWSSTIQFDAMGALSTKYNDTPEKASRTYDA NRDGFVISGGGGVLVIEELEHALARGAHIYAELTGYGATSDGYDMVAPSGEGAVRCMK MAMQGVGKVDYINTHGTSTPVGDTKELEAIQTLFGANGPKISATKAMTGHALGAAGVH EAVYSLLMMEHGFIAPSINIETLDEKAEGLPIVREYEAAELNTVMSNSFGFGGTNASL VFSKFKA" misc_feature 1960873..1962066 /locus_tag="B565_1741" /note="3-oxoacyl-(acyl carrier protein) synthase I; Reviewed; Region: PRK07967" /db_xref="CDD:181184" misc_feature 1960873..1962051 /locus_tag="B565_1741" /note="Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen...; Region: KAS_I_II; cd00834" /db_xref="CDD:29421" misc_feature order(1961170..1961172,1961191..1961196,1961206..1961208, 1961212..1961217,1961251..1961253,1961269..1961271, 1961281..1961283,1961293..1961295,1961311..1961313, 1961317..1961319,1961323..1961331,1961365..1961367, 1961374..1961379,1961386..1961388,1961449..1961451, 1961458..1961463,1961638..1961652,1961686..1961688, 1962025..1962027,1962031..1962033) /locus_tag="B565_1741" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29421" misc_feature order(1961338..1961340,1961740..1961742,1961845..1961847) /locus_tag="B565_1741" /note="active site" /db_xref="CDD:29421" gene complement(1962130..1962294) /locus_tag="B565_1742" /db_xref="GeneID:10487659" CDS complement(1962130..1962294) /locus_tag="B565_1742" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392394.1" /db_xref="GI:330829442" /db_xref="GeneID:10487659" /translation="MVDALLCSALLCSALLCSALLCSALLCSALLCSALLCSALLCSA LLCSALLCNE" gene complement(1962445..1964130) /locus_tag="B565_1743" /db_xref="GeneID:10487660" CDS complement(1962445..1964130) /locus_tag="B565_1743" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392395.1" /db_xref="GI:330829443" /db_xref="GeneID:10487660" /translation="MTIDFVTLLHQSDSLLLFVVLAFGLLLGKVRIGNFQIGNTIGVL FTALLFGQMGFEFAATTENVGFMLFIFCVGIEAGPHFFSVFLRDGIHYITLTLVILLT ALLLTVGLAKFFNLGPGMAAGILAGSLTSTPALVGAQDALRSGLLNLPHQTDMQAVLD NMGIGYALTYLVGLVGLMLVVRYLPSLARLDLNTEAQKIARERGLSDSESRKTYLPII RAYRVGPELAAWIGGRTLRETGIYPHTGCYVERIRRNGILASPDGDAVIQEGDEIALV GYPESHEKLDVNYRNGKEVFDRNLLDLQIVTEEIVVKNDSVVGRHLVELNLTEKGCFL NRVVRSQIEMPFDRNIMLQKGDVLQISGEKQRVKLLANKIGFISIHSQTTDLVAFTTF FVLGLLIGSVSLVFGQIEFGLGNAVGLLLAGILMGYLRANHPTVGYVPPGALRLAKDL GLAVFMVSTGLKAGGGILDHLSEVGTVVLFSGMLVTTLPVLVGYLFGVWVLKMNPALL LGAITGARTCAPAMDVVNEAANSSIPALGYAGTYAVANVMLTLAGSFIIGFWF" misc_feature complement(1962448..1964130) /locus_tag="B565_1743" /note="putative transporter; Provisional; Region: PRK04972" /db_xref="CDD:179905" misc_feature complement(1963621..1964028) /locus_tag="B565_1743" /note="Predicted Permease Membrane Region; Region: Asp-Al_Ex; cl06061" /db_xref="CDD:141906" misc_feature complement(1963276..1963479) /locus_tag="B565_1743" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature complement(1963006..1963215) /locus_tag="B565_1743" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature complement(1962460..>1962855) /locus_tag="B565_1743" /note="Predicted Permease Membrane Region; Region: Asp-Al_Ex; cl06061" /db_xref="CDD:141906" gene 1964268..1964432 /locus_tag="B565_1744" /db_xref="GeneID:10487661" CDS 1964268..1964432 /locus_tag="B565_1744" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392396.1" /db_xref="GI:330829444" /db_xref="GeneID:10487661" /translation="MKSGNFCCNCRCQLVKSAARDRSALAQADILDSAVRPLGGDQFQ QIQPMAAMVG" gene complement(1964904..1964979) /locus_tag="B565_t048" /db_xref="GeneID:10487662" tRNA complement(1964904..1964979) /locus_tag="B565_t048" /product="tRNA-Asn" /db_xref="GeneID:10487662" gene 1965113..1967125 /locus_tag="B565_1745" /db_xref="GeneID:10490033" CDS 1965113..1967125 /locus_tag="B565_1745" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit B" /protein_id="YP_004392397.1" /db_xref="GI:330829445" /db_xref="GeneID:10490033" /translation="MSKLFKLASQFQPAGDQPTAIAQLLDGIESGLAHQTLLGVTGSG KTFTMANVIATLNRPTMILAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYV PTTDTFIEKDASINDHIEQMRLSATKALLERRDVVIVASVSAIYGLGDPQAYLSMMLH LKVGDVINQRDILRRLAELQYTRNDMAFQRGTFRVRGEVIDIYPAESDKLALRVELFD EEVERLSQFDPLTGAIEQTVVRYTIYPKTHYATPRETILGAIEHIKEELRSRREQLLS LNKLVEEQRISQRTQFDMEMMQELGYCSGIENYSRYLSGRAPGEPPPTLFDYLPGDGL LIIDESHVTVPQIGAMFKGDRSRKETLVEYGFRLPSALDNRPLKFDEFEALMPQTVFV SATPGPYELEKSGGDVVQQVVRPTGLLDPEIEVRPVTTQVDDLLSEIRKRVAVEERVL VTTLTKRMAEDLTEYLAEHDVKVRYLHSDIDTVERVEIIRDLRLGKFDVLVGINLLRE GLDMPEVSLVAILDADKEGFLRSTRSLIQTIGRAARNLNGKVILYGDTITNSMKVAIE ETERRRALQHAHNLKHGITPKGLNKSIGDVMDMGGSRTAGKPGKGMRKAAEPQGEYHV RSASEIAKEIKRMEEQMFQHARDLEFEQAAALRDQIQQLRSELIES" misc_feature 1965113..1967119 /locus_tag="B565_1745" /note="excinuclease ABC subunit B; Provisional; Region: PRK05298" /db_xref="CDD:180000" misc_feature 1965212..>1965529 /locus_tag="B565_1745" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 1965236..1965250 /locus_tag="B565_1745" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 1966370..1966771 /locus_tag="B565_1745" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(1966472..1966483,1966541..1966546,1966619..1966627) /locus_tag="B565_1745" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(1966643..1966645,1966721..1966723,1966733..1966735, 1966742..1966744) /locus_tag="B565_1745" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature 1966766..1966897 /locus_tag="B565_1745" /note="Ultra-violet resistance protein B; Region: UvrB; pfam12344" /db_xref="CDD:192995" misc_feature 1967006..1967110 /locus_tag="B565_1745" /note="UvrB/uvrC motif; Region: UVR; pfam02151" /db_xref="CDD:145355" gene 1967122..1967379 /locus_tag="B565_1746" /db_xref="GeneID:10487663" CDS 1967122..1967379 /locus_tag="B565_1746" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392398.1" /db_xref="GI:330829446" /db_xref="GeneID:10487663" /translation="MSRKRWLIWQRLRRLYHGFRHPGTPWWARGLVILILLYGISPVD LIPDVVPLLGWFDDVTLLLVLLWGWERCLPPAVRSDLEQAS" misc_feature <1967152..>1967319 /locus_tag="B565_1746" /note="Protein of unknown function (DUF1232); Region: DUF1232; cl01318" /db_xref="CDD:194100" gene 1967558..1968205 /locus_tag="B565_1747" /db_xref="GeneID:10487664" CDS 1967558..1968205 /locus_tag="B565_1747" /codon_start=1 /transl_table=11 /product="DedA protein" /protein_id="YP_004392399.1" /db_xref="GI:330829447" /db_xref="GeneID:10487664" /translation="MDLILFAIDFILHVDVHLKELFENYGVWVYAILFLIIFCETGLV VTPFLPGDSLLFAAGALTVGSVLDVHTLAAVLIIAAVLGNVVNYTIGHFFGEQLFRNP DSKIFRRDYLEKTHAFYAKHGGKTIIITRFLPIVRTFAPFVAGMGAMTYPRFLAFNLV GGLLWVLSFVYAGHFFGNLPVVRHNFTLLIFGIIGISLLPMVIGAVKAKMGTAKA" misc_feature 1967558..1968202 /locus_tag="B565_1747" /note="SNARE associated Golgi protein; Region: SNARE_assoc; cl00429" /db_xref="CDD:193815" gene complement(1968284..1968805) /locus_tag="B565_1748" /db_xref="GeneID:10487665" CDS complement(1968284..1968805) /locus_tag="B565_1748" /codon_start=1 /transl_table=11 /product="Disulfide bond formation protein B" /protein_id="YP_004392400.1" /db_xref="GI:330829448" /db_xref="GeneID:10487665" /translation="MIEFLRRIAAHRLAWGLLAASALFLELCALFFQHVLGLSPCVMC VYERLATLGVLAAGLLGMVAPNKWYVRWSAILLWGYSAFRGFQLALKHVDYQVNPSPF NVCSPFADFPSWAPLDQWLPWLFMPEGDCAQITWQFFGYSMPQWLVVIFAAYLLVFTV VAIGNLVKGRCCN" misc_feature complement(1968287..1968805) /locus_tag="B565_1748" /note="Disulfide bond formation protein DsbB; Region: DsbB; cl00649" /db_xref="CDD:193898" gene complement(1968904..1970484) /locus_tag="B565_1749" /db_xref="GeneID:10487666" CDS complement(1968904..1970484) /locus_tag="B565_1749" /codon_start=1 /transl_table=11 /product="Na(+)/H(+) antiporter nhaB" /protein_id="YP_004392401.1" /db_xref="GI:330829449" /db_xref="GeneID:10487666" /translation="MPISLGQAFAKNFLGNAPQWYKSAILLFLVINPIAFHLDPFIAG WLLVVEFIFTLAMALKCYPLQPGGLLAIEAVLIGMTSADQVKHELVANIEVLLLLVFM VAGIYFMKQLLLYVFTKLLIGVRSKILLSLSFCLVSAFLSAFLDALTVIAVVISVATG FYAIYHKVSSGKEFGHSHDHTDDKEVAELNRQDLDDFRAFLRSLMMHAAIGTALGGVC TLVGEPQNLIIGEQASWNFAEFAIRMSPVTVPVFICGLLTCVLVEQFRWFGYGARLPD TVRAIMEEYNRYEEAKRSPQDKAKLIVQALIAIWLIVGLAMHLAAVGLIGLSVIVLAT SLTGITEEHSLGKAFQEALPFTALLAVFFSVVAVIIDQQLFKPVIQLVLAAKPENQLA LFYLANGVLSMVSDNVFVGTVYINEVKTAMLNGAIDRAQFDLLAVAINTGTNLPSVAT PNGQAAFLFMLTSALAPLLRLSYGRMVWMALPYTLVLGLIGFFSVELLLGPATEWFYQ HGWLVMESALPAVQQALH" misc_feature complement(1969000..1970280) /locus_tag="B565_1749" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cd00625" /db_xref="CDD:29728" misc_feature complement(order(1969006..1969044,1969120..1969137, 1969150..1969191,1969270..1969317,1969387..1969443, 1969480..1969524,1969546..1969584,1969702..1969746, 1969810..1969881,1969987..1970040,1970044..1970094, 1970161..1970214,1970257..1970280)) /locus_tag="B565_1749" /note="transmembrane helices; other site" /db_xref="CDD:29728" gene 1970749..1971531 /locus_tag="B565_1750" /db_xref="GeneID:10487667" CDS 1970749..1971531 /locus_tag="B565_1750" /codon_start=1 /transl_table=11 /product="Fatty acid metabolism transcriptional regulator FadR" /protein_id="YP_004392402.1" /db_xref="GI:330829450" /db_xref="GeneID:10487667" /translation="MLASHHRFDIIRQPFYALQQSQFMVIKAQSPAGFAEEYIIESIW NNRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSG LNILETLARLDQDKVPDLIAQLLSARTHICTIFIRGAIRHNPEQAAEILRGADGVENN AQAYAEFDYRLHHQLAFASGNPIYALILNGFKGLYSRVGSYYFSDKQARETADAYYKT LLNLAETKNHEAVFMTVRQYGIESGKLWTRLRQDMPSDLCDN" misc_feature 1970818..1971528 /locus_tag="B565_1750" /note="fatty acid metabolism regulator; Provisional; Region: PRK04984" /db_xref="CDD:179909" misc_feature 1970857..1971033 /locus_tag="B565_1750" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature order(1970911..1970913,1970917..1970922,1970944..1970958, 1970962..1970967,1970974..1970976,1971004..1971009, 1971013..1971024) /locus_tag="B565_1750" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature 1971031..1971522 /locus_tag="B565_1750" /note="FCD domain; Region: FCD; cl11656" /db_xref="CDD:196275" gene 1971797..1971937 /locus_tag="B565_1751" /db_xref="GeneID:10487668" CDS 1971797..1971937 /locus_tag="B565_1751" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392403.1" /db_xref="GI:330829451" /db_xref="GeneID:10487668" /translation="MSLLEHTIWTVLGYGAMPFIFLSGFVAVAVTCCMLLNAFGVQSA EK" misc_feature 1971797..1971922 /locus_tag="B565_1751" /note="Protein of unknown function (Duf2374); Region: DUF2374; cl09797" /db_xref="CDD:158699" gene 1972126..1972683 /locus_tag="B565_1752" /db_xref="GeneID:10487669" CDS 1972126..1972683 /locus_tag="B565_1752" /codon_start=1 /transl_table=11 /product="YaeQ" /protein_id="YP_004392404.1" /db_xref="GI:330829452" /db_xref="GeneID:10487669" /translation="MALKATVFKAQISLSDMDRNLYQDFSLTLARHPSETDERMMIRL AAFAWHAAERLEFTKGLSADDEPELWCKNYSDEIELWIELGQPDEKRLKKACNRARQV VLYLYGGRGTAVWWKQNQGKLSQHDNLSIIELSDSQTLPLTAMVERTMQLTCTISDGQ LWVSNGALEVTLDPVVLMGKPAREL" misc_feature 1972129..1972653 /locus_tag="B565_1752" /note="YaeQ protein; Region: YaeQ; cl01913" /db_xref="CDD:154653" gene 1972696..1973277 /locus_tag="B565_1753" /db_xref="GeneID:10487670" CDS 1972696..1973277 /locus_tag="B565_1753" /codon_start=1 /transl_table=11 /product="auxin efflux carrier" /protein_id="YP_004392405.1" /db_xref="GI:330829453" /db_xref="GeneID:10487670" /translation="MFSALLNIVIPVFGVVGLGALYGRLRPGAALGYVNRANIELFTP ALVFSALVKYPLALAEHLPLIAAGALVILLPGLLLALLKLKGIERAALILPAMFRNTG NLGIPLMVLAFGEQQLGAIVILFVLSNLLHFSVGMFILSANTSRWLWLRSPVLWAALA GLLVANLHIALPEYVVTTASLLGQISVPLMLFV" misc_feature 1972696..>1973274 /locus_tag="B565_1753" /note="Membrane transport protein; Region: Mem_trans; cl09117" /db_xref="CDD:189190" gene complement(1973549..1974295) /locus_tag="B565_1754" /db_xref="GeneID:10487671" CDS complement(1973549..1974295) /locus_tag="B565_1754" /codon_start=1 /transl_table=11 /product="Prophage MuSo1, transcriptional regulator, Cro/CI family" /protein_id="YP_004392406.1" /db_xref="GI:330829454" /db_xref="GeneID:10487671" /translation="MSERYEEKPQAVQKDGEVSFLTAGMDTLSDRLDELRGSLSYKAF AELVGMSESGMRKYFPPFNSLPTIDKALRIARTFNVNLEWLATGQGPKHPDGTAEQMV QREEFDEEYALIDGYHVTVSTGHGAFNDDHEVKRKLAFRRKWLTFRKLNPDNLVVVFA KGDSMEPTIHSGDSILVDISKNQIEDGSIFVLRLGEELYAKRLQKNFDGGITIISDNR DDYPLQVVPANQLENLAVIGKVVWAGHDFF" misc_feature complement(1974041..1974205) /locus_tag="B565_1754" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cl09100" /db_xref="CDD:195788" misc_feature complement(1973582..1973830) /locus_tag="B565_1754" /note="Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (...; Region: S24_LexA-like; cd06529" /db_xref="CDD:119397" misc_feature complement(order(1973693..1973695,1973804..1973806)) /locus_tag="B565_1754" /note="Catalytic site [active]" /db_xref="CDD:119397" gene 1974704..1976902 /locus_tag="B565_1755" /db_xref="GeneID:10487672" CDS 1974704..1976902 /locus_tag="B565_1755" /codon_start=1 /transl_table=11 /product="integrase catalytic subunit" /protein_id="YP_004392407.1" /db_xref="GI:330829455" /db_xref="GeneID:10487672" /translation="MSTWYTAQALAGLVGMPAYPDGVRKKAEREEWQSRKREKGKGAE YHIGSLPIETRRYLAEQAVAAQGHAAGGKAMAKLLAREVPVKPEAGRKLLTLREGARQ KVDARLLILQAADIFLAPYHACQQGEVGRRAFIEAYRARTLALPVSVYERQKPFSLIT LRRWQSALADEGPAALAGNYQRERPSTVEQSPDLAQFLTALVTTKPHLANKWGALHEL ASQYSDMNQLGWQIPSQSSLRRWMVKWLAENKVAFTYTTNPDAYNNKYRSAIEEMYPW MAQPNDVWEFDSTPVDAMLVDGRHSIIAVIDVYTRRVRLLVAKSSSSEGICLLLRKTL LAWGTLNDNGVMRTDNGSDYVSQRVMSICTLLGMNVSRSNAYSGWEKPHIERFFRTLS HGLIELLPSYIGHCVADRQVIEARKSFAQRLEEKRKPDAQKEIYELAMTAAELQTLLD NWLDARYHNRKHSALGVSPNEKYQLARYQRRAIPDEAALDLLLNHIGEATVSKGFIKA GGLKYSAPELLEHNWKSQRVSVFLDPCDVGRAILYRTGDWNERIEAINIDLLGNGISP DAFRAAKKADAKALASFRREMRNLAKTFGIDQLHQDVVRHFVDQAKGIEAFSRRDLTL DNPALAALTGVSTPAEPARFNAAELAAIEARREAKALRAQATAGQESRALKTEYEQAI YLAERELDTPLTEREKEWLTRYLYSHKLMAKRINRHLDEVRATRRTQAKG" misc_feature 1974728..>1974868 /locus_tag="B565_1755" /note="Mu DNA-binding domain; Region: HTH_Tnp_Mu_1; pfam02316" /db_xref="CDD:111230" misc_feature 1975538..1975876 /locus_tag="B565_1755" /note="Integrase core domain; Region: rve; cl01316" /db_xref="CDD:194099" gene 1976945..1977667 /locus_tag="B565_1756" /db_xref="GeneID:10487673" CDS 1976945..1977667 /locus_tag="B565_1756" /codon_start=1 /transl_table=11 /product="Prophage MuSo1, DNA transposition protein" /protein_id="YP_004392408.1" /db_xref="GI:330829456" /db_xref="GeneID:10487673" /translation="MKHKIVEVKNMIKTEQLLDNLLNRSSIVPGIGLIHGPSGFGKTT AVEWLFNQDEVNGIYVRCYKADTVTSLLEQIAKEIGIPQRHNLRAQVDSIIESVRAEE LAIFVDEADYVVGNARIMETLRDIYDATEQPLILVGMEEIARRISQRKQLFNRISQWI EFKPADLDDVSLIASEMLEVDVEIDDALLDLIRKRSNGVVRTIVSALDKIEKMAMASD AQIIRLEDVDASELLHDVRRSR" misc_feature 1977032..1977655 /locus_tag="B565_1756" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" gene complement(1977671..1977865) /locus_tag="B565_1757" /db_xref="GeneID:10487674" CDS complement(1977671..1977865) /locus_tag="B565_1757" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392409.1" /db_xref="GI:330829457" /db_xref="GeneID:10487674" /translation="MATCQPTAHNQIDISQLELAPLYQFKQVERVLLTHPVPCFFCVA ISDFSNHWNPSRALFLLAVA" gene 1978028..1978330 /locus_tag="B565_1758" /db_xref="GeneID:10487675" CDS 1978028..1978330 /locus_tag="B565_1758" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392410.1" /db_xref="GI:330829458" /db_xref="GeneID:10487675" /translation="MWNTMKISRFFTLSDLAITSGVDDSGASTYTTFLIRAGYVRLVD KIERFKVKGDQNRYQLIRDTGRFAPMVRAKQGGCWDQNEQHFYQFDVKEAPHGNVA" gene 1978314..1978865 /locus_tag="B565_1759" /db_xref="GeneID:10487676" CDS 1978314..1978865 /locus_tag="B565_1759" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392411.1" /db_xref="GI:330829459" /db_xref="GeneID:10487676" /translation="METWLEVLQAEVAASSLAQVAEKLGLSRTTISQVCNEKYPGDMA RVQTLVEGALMGNKVRCPILGDIPAHQCLAHQRRGPSEVGSSPMDIKLWKACRSGCPH SQLTEAQQLRRPMRLSVEQGKGSQKMARYDAEATLSRLRRQAKSDGDNASSSLRILSE LLAEELKIMAIKYNRLLDKQEGK" gene 1978922..1979170 /locus_tag="B565_1760" /db_xref="GeneID:10487677" CDS 1978922..1979170 /locus_tag="B565_1760" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392412.1" /db_xref="GI:330829460" /db_xref="GeneID:10487677" /translation="MKKYLHSNLQKTAEQLSHWLTAKGYDVRTSRVCHTPLLAVTGPL PKEMQARAVLSRECLAGVVREVALVRFGGCLLHWRQES" gene 1979133..1979369 /locus_tag="B565_1761" /db_xref="GeneID:10487678" CDS 1979133..1979369 /locus_tag="B565_1761" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392413.1" /db_xref="GI:330829461" /db_xref="GeneID:10487678" /translation="MAAACSTGAKNPETGKGDEMSKIQLEIEDEALARVVLRQLPKFL EFCSATHQEELASATTEQYSAVMCPPVPGSNKIH" gene 1979380..1980000 /locus_tag="B565_1762" /db_xref="GeneID:10487679" CDS 1979380..1980000 /locus_tag="B565_1762" /codon_start=1 /transl_table=11 /product="Gp05" /protein_id="YP_004392414.1" /db_xref="GI:330829462" /db_xref="GeneID:10487679" /translation="MQEAQTASTTPMRQNAQGHWVPESLIAPADKLRDEVVLAIIAAA REQRAQLAAFKIGAMQQIADFVDLSAEQYGVAWGGTKGNVTLLSFDGRYKLIRAVGEH RKFDERIQAAKALIDQCIARWSDGASSEIRALVDHAFRVSKSGHIDVNQVLSLRQLNI DDPDWLLAMQAAVDAIQVTGTSQYLRLYERDAHGRYIQMSLDLAKL" misc_feature 1979413..1979994 /locus_tag="B565_1762" /note="Protein of unknown function (DUF3164); Region: DUF3164; pfam11363" /db_xref="CDD:151804" gene 1980015..1980209 /locus_tag="B565_1763" /db_xref="GeneID:10487680" CDS 1980015..1980209 /locus_tag="B565_1763" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392415.1" /db_xref="GI:330829463" /db_xref="GeneID:10487680" /translation="MEINVEKAEEQLLLCEQITETEGTCYPDDTYEDGIKAALLWVLG LGPAPLNAEEYQGVTPLQFE" gene 1980332..1980589 /locus_tag="B565_1764" /db_xref="GeneID:10487681" CDS 1980332..1980589 /locus_tag="B565_1764" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392416.1" /db_xref="GI:330829464" /db_xref="GeneID:10487681" /translation="MTKTEMDIRLTKIFSSAAIALVAAEKRAVCKQLKQFDKEARARG FHALAGEACQMRWQLVAELQQAKSARDGGGVHGTGDRHGHL" gene 1980576..1980842 /locus_tag="B565_1765" /db_xref="GeneID:10487682" CDS 1980576..1980842 /locus_tag="B565_1765" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392417.1" /db_xref="GI:330829465" /db_xref="GeneID:10487682" /translation="MAIYSPLLAPHILARRLQSGRACITELGLEQRCPRCGEFWPWDT EFFGVASDATRLSSWCRGCLNEHYQQLRVAGQHHDSKAERGGDR" gene 1980842..1981291 /locus_tag="B565_1766" /db_xref="GeneID:10487683" CDS 1980842..1981291 /locus_tag="B565_1766" /codon_start=1 /transl_table=11 /product="Mu-like phage E16 protein" /protein_id="YP_004392418.1" /db_xref="GI:330829466" /db_xref="GeneID:10487683" /translation="MDKRSRLIRLVQVGRRALALEDESYRDLLASHTGKRSAALLSEQ ELEQVLAAFKAAGFIPKPARHAANRRLSPAAGSHIRVNEIAKIRAIWCEMARLGIIRD GSETALNHWVQRMTARLNGGVGVAEVGWLDAPLAVKVLEALKKWSAR" misc_feature 1980899..1981288 /locus_tag="B565_1766" /note="Protein of unknown function (DUF1018); Region: DUF1018; cl01815" /db_xref="CDD:154603" gene complement(1981343..1982707) /locus_tag="B565_1767" /db_xref="GeneID:10487684" CDS complement(1981343..1982707) /locus_tag="B565_1767" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392419.1" /db_xref="GI:330829467" /db_xref="GeneID:10487684" /translation="MSNDKGDYLTDGLRVAVHHKQMLDQLGSEHDEQRHSLDAAINSS EALLRRLGKALPVKDSSTSNSLHVITPVRTKSWEEILAEAKQAIPAEVDFNDVLTPAE IDAVLAKHQKLGEHLGWLGSLDRYDVALAVSAGILSGLIDIFLVQVPAHPGFLGSPAS EGGWLSNKVKELFGEVLPPEKIKELEGLYKVSFDPSTSKGLEEAVAGLGPRTHRYQSL GHDPILGFIFGVKDVLCGEFTAIDKFGNVIVQQTAAPLLEGEHFIIRLLEAIRKVGGH LASDVATSAGLPAPLMPLLSFFQFGTIGKQGYTIAEVARQMYRSGYDLRHFIAASVPL AISELIVRLGFMVRKLNAGATLAEAFPNAAHPQLRRQLLIAHGVAGVINAGKVTVTSN PLSISWPLVLTLLRYGMPEMMYLIYGQEKERAKLVETEIMTDYRAIHQELDTQLKMLP HIVI" gene complement(1982707..1983240) /locus_tag="B565_1768" /db_xref="GeneID:10487685" CDS complement(1982707..1983240) /locus_tag="B565_1768" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392420.1" /db_xref="GI:330829468" /db_xref="GeneID:10487685" /translation="MSKEAIYKNLESLAPVVKVLGEVDKALNDKERIDSDSDDIKEVL AAAGGVGAGAGIGFAGLYFGGVTGLSAAGITSGLAAAGGLVGGGMAAGVAVLAAPAVL LGVGAYAFVSQRNKRKLKEKKEMLLQEAMKKQNAIISELRKSSDDNKARADYLTKLNT LLQSIIIDLEGDLKVAA" gene 1983463..1983891 /locus_tag="B565_1769" /db_xref="GeneID:10487686" CDS 1983463..1983891 /locus_tag="B565_1769" /codon_start=1 /transl_table=11 /product="Mu-like phage C protein, positive regulator of late transcription" /protein_id="YP_004392421.1" /db_xref="GI:330829469" /db_xref="GeneID:10487686" /translation="MEQNQDLFADDHASLGQLADRLDQIPASELTAKWPKALAELVDV LACELVRGGMEPDLAKAQARKLALVQAHYMGGRAYYLPTGEHLKAALRDRAIWDEFNG RNIDVLARKHGLSVPQTYAVVAEQRQLARRRFQPDLFDRQ" misc_feature 1983466..1983879 /locus_tag="B565_1769" /note="Mor transcription activator family; Region: Mor; cl02360" /db_xref="CDD:121262" gene 1984255..1984833 /locus_tag="B565_1770" /db_xref="GeneID:10487687" CDS 1984255..1984833 /locus_tag="B565_1770" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392422.1" /db_xref="GI:330829470" /db_xref="GeneID:10487687" /translation="MGKEDDAIESFSVAMERFYEPRVGINFCTYLKRIGRNTDFLQHA YLFAEQFEDPDLVQTAWESAKVMFDDAKVRTFSRKLRKYYPNEHGENIVTTSEAFIGR LQNLEAELGVKAADIHRLSEACLRIATKYRKSINSSGLGVGEGLAMVCFEVDRCEPDV VSDMNYDLAMEVAELDNLLDIPATAWFRCAAR" gene 1985480..1985926 /locus_tag="B565_1771" /db_xref="GeneID:10487688" CDS 1985480..1985926 /locus_tag="B565_1771" /codon_start=1 /transl_table=11 /product="secretion activator protein" /protein_id="YP_004392423.1" /db_xref="GI:330829471" /db_xref="GeneID:10487688" /translation="MADLDRDGVPDIAIGDLTPAHTEPFYRQNYWMPARCDLIASLSP ALSIAVFDAAVHHGPKRAIQQLQQVLGGMADGRLGPVSIGRLKQQLGAKGEGQSLLAL MMQRASFMHGIVRKDPSQWANADGWINRLLRLQSYLLSDVVGEVVA" misc_feature <1985519..1985653 /locus_tag="B565_1771" /note="Predicted lysozyme (DUF847); Region: DUF847; pfam05838" /db_xref="CDD:147798" misc_feature <1985525..>1985917 /locus_tag="B565_1771" /note="Lysozyme family protein [General function prediction only]; Region: zliS; COG3926" /db_xref="CDD:33711" gene 1985923..1986240 /locus_tag="B565_1772" /db_xref="GeneID:10487689" CDS 1985923..1986240 /locus_tag="B565_1772" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392424.1" /db_xref="GI:330829472" /db_xref="GeneID:10487689" /translation="MSVLTIKQQKAAAAIQAAGYFGIPELKNPRYLACFKDGRKAHLK AALANQIADPKAIPLYSHHQTRQSLFEKGWRSVTELDRLRARARHSQPPLFQPKKKEV HHA" gene 1986233..1986454 /locus_tag="B565_1773" /db_xref="GeneID:10487690" CDS 1986233..1986454 /locus_tag="B565_1773" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392425.1" /db_xref="GI:330829473" /db_xref="GeneID:10487690" /translation="MPDSLLPQAKSAFKSRTVIGGVIAVGAGIAGLFGVPVDAGTQAS LASTLVDLASAVGGLLAIWGRIKATHTVR" gene 1986684..1986998 /locus_tag="B565_1774" /db_xref="GeneID:10487691" CDS 1986684..1986998 /locus_tag="B565_1774" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392426.1" /db_xref="GI:330829474" /db_xref="GeneID:10487691" /translation="MWDFIVKNWGPLYALASLVGLVVIILLSKTYAKREDLTALVQRV QRVEQVLADLPSERELHKLQLEISELRGELREVKPELRQARRLADLLLENELAAVQKE KP" misc_feature 1986684..1986920 /locus_tag="B565_1774" /note="Protein of unknown function (DUF2730); Region: DUF2730; pfam10805" /db_xref="CDD:151255" gene 1987078..1987374 /locus_tag="B565_1775" /db_xref="GeneID:10487692" CDS 1987078..1987374 /locus_tag="B565_1775" /codon_start=1 /transl_table=11 /product="putative prophage protein" /protein_id="YP_004392427.1" /db_xref="GI:330829475" /db_xref="GeneID:10487692" /translation="MSIQAILDAQQRLVILRSLLDIGGAANESILNDCLDQLGTGRVT RDRVKTLLAWLEEQGLVRIERLATVQVAHLTGRGQDAAEGRATVPGVKKPRAGD" gene 1987389..1987964 /locus_tag="B565_1776" /db_xref="GeneID:10487693" CDS 1987389..1987964 /locus_tag="B565_1776" /codon_start=1 /transl_table=11 /product="protein gp27" /protein_id="YP_004392428.1" /db_xref="GI:330829476" /db_xref="GeneID:10487693" /translation="MSEKPTRGRASKVWLLPESIRNALNEMLRDKGNSQAAILDEING LIEEAGLPDELKLSRSGLSRHASQVEQVGQHLRDLRETTAALTSQLGDKPMGETTKLI LELGRSQLFKAMLAQVQNPEEAVDIDMLKNAMLAAQRLESTAMQSHKREKEIRQAFAE EIAAKTEAIVTQAGLSGEAAAEIRREILGIA" misc_feature 1987407..1987955 /locus_tag="B565_1776" /note="Protein of unknown function (DUF3486); Region: DUF3486; pfam11985" /db_xref="CDD:152420" gene 1987964..1989532 /locus_tag="B565_1777" /db_xref="GeneID:10487694" CDS 1987964..1989532 /locus_tag="B565_1777" /codon_start=1 /transl_table=11 /product="Mu-like prophage FluMu protein gp28" /protein_id="YP_004392429.1" /db_xref="GI:330829477" /db_xref="GeneID:10487694" /translation="MTAIAQTPIAQQLAQTLGTEYNPDEVLLPYQRIWIADDSPLKIA EKSRRTGITWAEAADAALTASKTKTAGGCHHFYVGSNKEMAREFIDAVAMWAKAYNKA AGEIQEEVFTDDEDKAILTFVVYFASGFKVQALSSNPSNLRGMQGNVTIDEAAFHERL AEVLKAAMALTMWGAKVRLISTHNGVDNLFNQLINDSRAGRKEYSIHTISLDDACRQG LYRRICQVKGGLWTQEAEDAWKAGLLKATATEEDALEEYFCVPKQSSGVYIKRTLIER AMQPDIPILRFTAPKDFELQSEETRKAVVDIWCEENLQPCLEALDRSCRHVLGEDFAR KGDLSVFVPLSIATYLRKRVPFVVELVNAPYESQRQILFYLLIGLHRFTAAAFDATGN GGYLAEAARLRWGASMIECVMLNDPWYREWMPKLKAEFEDGNLTIPRHADVQDDLGKI QVINGIPKIDKGKNTGQGGQQRHGDFAVALAMAVRASWMEGGAIEFTPLPGKRDDHGS DNNDDYHRYERGAW" misc_feature 1988030..1989529 /locus_tag="B565_1777" /note="Mu-like prophage FluMu protein gp28 [General function prediction only]; Region: COG4373" /db_xref="CDD:34082" gene 1989532..1991115 /locus_tag="B565_1778" /db_xref="GeneID:10487695" CDS 1989532..1991115 /locus_tag="B565_1778" /codon_start=1 /transl_table=11 /product="Mu-like prophage FluMu protein gp29" /protein_id="YP_004392430.1" /db_xref="GI:330829478" /db_xref="GeneID:10487695" /translation="MGRIIDINGNPLRLEKESQTENSAALAQLRRHYSEHPTVGLTPS RAAAALKEAEQGNLIAQCELAEDMEEKDAHLQSELGKRRRALLGVSWTIEPPRNATSA EKRDSEMIRELIEDFTWFDDAIFDATDAVLKGFCAQEFCGWELVEGLQLPKGIIWRDP AWFQTHPDDRNQLRLRDNSHEGVALNPFGWLLHKAKSKSGYLARTGLVRTLIWPFLFK NYSVRDLAEFLEIYGLPVRLGKYPEGATEKEKATLLQAVLSIGHNAGGIIPRGMEIEF QNAASGQADPFVVMMDWCERSMSKAILGGTLTSQADGKSSTNALGNVHNEVRQEVRDA DLRQLAATLTRDLVYPLYALNGKSYQGPRRSPRLEFDVTEPEDMQQLAGPLRTLVSIG MKIPTQWVYDKLQIPVPTAQEEVLAIQDNRGATGEAELKARLPRQGLATLAAHKAVQG DNNDAQLARLQAEAAPLLAGMTDAVQTLVMQATTLEEIRDGLLTLEPELSHDELGALM AQAIAVSELLGMLEMEEGR" misc_feature 1989532..1991076 /locus_tag="B565_1778" /note="Protein of unknown function (DUF935); Region: DUF935; pfam06074" /db_xref="CDD:147953" misc_feature 1989538..1991076 /locus_tag="B565_1778" /note="Mu-like prophage protein gp29 [Function unknown]; Region: COG4383" /db_xref="CDD:34090" gene 1991115..1992602 /locus_tag="B565_1779" /db_xref="GeneID:10487696" CDS 1991115..1992602 /locus_tag="B565_1779" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392431.1" /db_xref="GI:330829479" /db_xref="GeneID:10487696" /translation="MPVRSSPVRYGSLPFAEAIAFFRQKLDMPSERWADVWRDAHNRA FMVAGATKTDLLADLRGAVDKAISEGQSIGAFQKAFKEIVARHGWEHTGPASWRSRII FETNLRQSYNAGREEQIQRIKHKRPYALYRHGDSEHPRELHLKWNNLVLPVDHPWWET HSPSNGYGCKCKKFLLSEADLKRRGLVVGKAPDDGEYEWVDKATGELHKIPRGIDPGF DYRPQTPVDLTKGVAKREAAKPALAERLPERIVDSAFSSVKGVTAQGLSDLLTKLPAP QREPLAAFLKAHPVKTLFIKQTEMGKGAAGLKVAPAIADYLGKDPYLVRSFYYSRRAS RVNGFTATSWDHLVIKVKGGDTLNAVDMQAVQAAAADVLTDAYANRGPRQLLPRGASG EALRRHWSVSANVGDKLGESAQRISTWLHELGHQVHFWAGEPNLTGIGLITEYAGTNG KEMAAEAFAAWVLARESMLEHFPELAKGVEAMLAKATAATTKGSR" misc_feature 1991283..1991630 /locus_tag="B565_1779" /note="Phage Mu protein F like protein; Region: Phage_Mu_F; cl10072" /db_xref="CDD:142383" gene 1992638..1992838 /locus_tag="B565_1780" /db_xref="GeneID:10487697" CDS 1992638..1992838 /locus_tag="B565_1780" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392432.1" /db_xref="GI:330829480" /db_xref="GeneID:10487697" /translation="MTLLEQASALLAQDGPFTLAQAKALDALCEQARDEEADLMGDLW EAAMANADEEALHYMTTFEDEF" gene 1992838..1993275 /locus_tag="B565_1781" /db_xref="GeneID:10487698" CDS 1992838..1993275 /locus_tag="B565_1781" /codon_start=1 /transl_table=11 /product="phage virion morphogenesis protein" /protein_id="YP_004392433.1" /db_xref="GI:330829481" /db_xref="GeneID:10487698" /translation="MAGSFIAISHHGVADAFDLLAKLYQKTGDLSEPLADIGEGLLLS HRDRWDAQESPEGEPWAPLSEKYRARKPRHADEVLRLNDDLRDTLDYQVEPQALYFGT PMVYGAAHQFGRPEINLPERRALGLSEGDKQSVLETLEGYISR" misc_feature 1992874..1993269 /locus_tag="B565_1781" /note="Phage virion morphogenesis family; Region: Phage_tail_S; cl02089" /db_xref="CDD:154737" gene 1993578..1995110 /locus_tag="B565_1782" /db_xref="GeneID:10487699" CDS 1993578..1995110 /locus_tag="B565_1782" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392434.1" /db_xref="GI:330829482" /db_xref="GeneID:10487699" /translation="MWLHYRWCVMTLSKSDVLCSMNFGQRVAEEEADHLHTYFVETED WRKLYSGEVDVIYGSKGAGKSALYSLIQLKQDDLRNRGVFIISAENPRGATAFRGIVT DAPANERDFMFLWKLYFLSLLYKALEENNIRNEHSEKVRQALEKNGLIKKGTLASLLA AVKGYVNKYSSPTTFEPTVSLDPSTQMPVSLSAKITFEEPGYVNGEEQDQSVDSLFEL VECALNKENKKVWILLDRLDVAFSENEVLEVAALRALFRVYLDLAAMTSFKTKIFLRT DIWARITESGFREASHITRHLTISWNKTSLLCLVVKRALFNEQVKKHYCVDDALLRSS IADQEVFFYRVFPKQVDIGQNKSNSFDWMLARTRDGSKLNAPRELIHMLNSLRDQQIK RYELGEEPQPDGENLFARAAFKAALPEVSKVRVEQTLYAEHADKKQWIEDLREERTLH TVSSLASIWDISGDDATRRVEKLVSIGFFEKRGSKQAPDYWVPFLFRDYLSLIQGAAE TD" gene 1995148..1996368 /locus_tag="B565_1783" /db_xref="GeneID:10487700" CDS 1995148..1996368 /locus_tag="B565_1783" /codon_start=1 /transl_table=11 /product="I protein" /protein_id="YP_004392435.1" /db_xref="GI:330829483" /db_xref="GeneID:10487700" /translation="MPPHYGGMNISKTPYSAPFVAILQANPVSGERLAVLDAQLTPQG DGWYQLLPVGPFKARDGRPFDVASGHWQLDGQIAAALIARAKALGQDILIDYDHQTLK TDQNGQPAPAAGWYNSDEIAWREGQGLFIKPRWTERAAALVAAKEYRFLSAVFPYDAQ GRPLELRMTAITNDPGVVGMQALAALSALPASSHMSIQPGQLATSSHVAQQEKSMNEH LIALLGKLGIQPGADGQFTAEQGTAALAALDTLQAIAKKAPELEAALTAERTSLAALK ATVSTGQGGQIDLAKYVPVETYNALVTEVATLSAKVETTDAATLIKEARTQGKVVAAE EEYLTAYAAQKGVAALKALLEPRPAIAALAASQTTQVTLPDRAENAVLSADDKYAADQ LGISYEEFAKAKGR" misc_feature 1995244..1996359 /locus_tag="B565_1783" /note="Mu-like prophage I protein [General function prediction only]; Region: COG4388" /db_xref="CDD:34095" misc_feature 1995292..1996353 /locus_tag="B565_1783" /note="Mu-like prophage I protein; Region: Mu-like_Pro; pfam10123" /db_xref="CDD:150761" gene 1996449..1997357 /locus_tag="B565_1784" /db_xref="GeneID:10487701" CDS 1996449..1997357 /locus_tag="B565_1784" /codon_start=1 /transl_table=11 /product="putative phage major head subunit" /protein_id="YP_004392436.1" /db_xref="GI:330829484" /db_xref="GeneID:10487701" /translation="MAIVTPALLQALFTGFKKNFEDAKGEAPAQYTKIATVIKSTTKS NTYGWLGKFPSLRKWVGDRVIESMKAHGYQIVNEDFEATVAVDRNDIEDDELGIYAPL FQEMGLAAGIHPDELCFGLLGAGFTTPCYDGQYFFDTDHPVYPKADGTGTPVLSANVV VDVGYQGEPWFLLDTSRALKPVIFQDRKSPQLIAMTKVDDEAVFTRKEFRYGVDCRDA AGFGFWQLAFANKRALTPDNLWDSFSKMREFQADGGRKLGVKATLLVVPPSLEKLATQ MLERELANSSSNELKGKLELVVADYL" misc_feature 1996473..1997354 /locus_tag="B565_1784" /note="Mu-like prophage major head subunit gpT; Region: Mu-like_gpT; cl01826" /db_xref="CDD:154610" gene 1997428..1997907 /locus_tag="B565_1785" /db_xref="GeneID:10487702" CDS 1997428..1997907 /locus_tag="B565_1785" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392437.1" /db_xref="GI:330829485" /db_xref="GeneID:10487702" /translation="MEQEMELAIRVGITSMVRQNYFRAGLPIVPGKSEMVVSPEQCAT LENDPRLVVVRLAEDASLQTGDAPSAPGDLDATLGVLTGSGYLAGVATQNSDATQAGK VTPLTEMKVDELRELAVQMGIPEAAKLKKAELVTAIAATDVQYPVKDEQPSGQNGEQ" misc_feature 1997743..>1997841 /locus_tag="B565_1785" /note="Rho termination factor, N-terminal domain; Region: Rho_N; pfam07498" /db_xref="CDD:191758" gene 1997909..1998334 /locus_tag="B565_1786" /db_xref="GeneID:10487703" CDS 1997909..1998334 /locus_tag="B565_1786" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392438.1" /db_xref="GI:330829486" /db_xref="GeneID:10487703" /translation="MYASVNDMVIRFGEAELLRLAMTPTGELDEVALRLALQDAGALI DGYLAGRYPLPLAHIPSALVPICADIARHRLYGEQAPEQIAKRNEAALVFLKSVGKGE LALGLASDGATLESQNLAQLQSDGRVFGRSQGRDKGGFL" misc_feature 1997912..1998307 /locus_tag="B565_1786" /note="Protein of unknown function (DUF1320); Region: DUF1320; cl01818" /db_xref="CDD:194195" gene 1998331..1998777 /locus_tag="B565_1787" /db_xref="GeneID:10487704" CDS 1998331..1998777 /locus_tag="B565_1787" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392439.1" /db_xref="GI:330829487" /db_xref="GeneID:10487704" /translation="MSQPANPSGAELDYLQAGERLRELLTPLKSAGLKEVFVATDVAA IANLGQHSPAVHVVYQGERESEGTQSGRASSFDQLWLLVLVHRASPKEVSAGVWLGRI LQAVSGRACGDSTFRRVTPPVKPSYSGGAAYLPLAFTTRVKFKGER" gene 1998774..1999526 /locus_tag="B565_1788" /db_xref="GeneID:10487705" CDS 1998774..1999526 /locus_tag="B565_1788" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392440.1" /db_xref="GI:330829488" /db_xref="GeneID:10487705" /translation="MMSETLHLEGDLFIETFVNGLSAGVIGPIDVDSLEVKPDSQKIS IPSKRKGQYGQARENYHIPKPAMVTIKTTEIPPVLLAAAFMGLESPINQGAGTLTDLQ VVLPAWPKWAQLGKSNIASTGLTIKEGVTALVVGTDIEVNYALGLVRAIKGSSVADGG SLTVSGTYNAVTGTRIAGNIQPEIKARLLLDGRSIVSGEAIKLTVPRASLAPKKAVDF MSDKPIEIELEGELLAVDGETAPFYVDRPVTA" gene complement(1999585..1999896) /locus_tag="B565_1789" /db_xref="GeneID:10487706" CDS complement(1999585..1999896) /locus_tag="B565_1789" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392441.1" /db_xref="GI:330829489" /db_xref="GeneID:10487706" /translation="MMTEDERHELFLQHEYRKNANPDITRLGFEFNLLCNYWDFFVSN GGDTSVITLQKRKYAYALTYLRYCGVRYQTIDKHFDFQKLRALCINEYQFEDIWQLFD D" gene complement(2000538..2000822) /locus_tag="B565_1790" /db_xref="GeneID:10487707" CDS complement(2000538..2000822) /locus_tag="B565_1790" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392442.1" /db_xref="GI:330829490" /db_xref="GeneID:10487707" /translation="MHQFGVWHEGGHHTIQGLPILKHLLHTLHGDVMVRYVCRADTPC TLFLTIKDGVPYQKFKEGTPPLDWQWLENSILPLSASSQPLAMIKRLALR" gene complement(2001046..2001519) /locus_tag="B565_1791" /db_xref="GeneID:10487708" CDS complement(2001046..2001519) /locus_tag="B565_1791" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392443.1" /db_xref="GI:330829491" /db_xref="GeneID:10487708" /translation="MKFYSADRYQKICEDNYIHYNNLIKNLLPNARVEHIGASSIPLA ISKGDLDIFVGVDSSDFEKAIQSLMTLDFREKKDTLRTTELCMLESNKNDNVALQVVV NGSEFEFFLSFRDKLLTNSSLANMYNELKLSCEGLSEEEYRIKKSTFIEFVLNQT" misc_feature complement(2001052..2001519) /locus_tag="B565_1791" /note="Uncharacterised protein family (UPF0157); Region: UPF0157; cl00987" /db_xref="CDD:193998" gene complement(2001586..2002155) /locus_tag="B565_1792" /db_xref="GeneID:10487709" CDS complement(2001586..2002155) /locus_tag="B565_1792" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="YP_004392444.1" /db_xref="GI:330829492" /db_xref="GeneID:10487709" /translation="MNLDNYGSFLCVIVVGYLTKRYKLEGNMEDIIKQAIDFRKAAKY QESRALLETLLNDEDYAAKAHLQIAWSYDNEGKEQEAIGHYLSSLSGTLSSAERFDAL FGLASTYRSLGNYPESLVYFEKTISEYPESIEVQPFYAMCLYNLERHKEATSLLLRLL VSTTNSAEIKEYQRAILLYAKDLDKKWRS" misc_feature complement(2001760..2002071) /locus_tag="B565_1792" /note="tol-pal system protein YbgF; Region: tol_pal_ybgF; TIGR02795" /db_xref="CDD:188247" misc_feature complement(2001700..2001969) /locus_tag="B565_1792" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cl02429" /db_xref="CDD:194311" misc_feature complement(order(2001718..2001723,2001730..2001735, 2001742..2001747,2001823..2001828,2001835..2001840, 2001844..2001849,2001943..2001948,2001955..2001960, 2001964..2001969)) /locus_tag="B565_1792" /note="binding surface" /db_xref="CDD:29151" misc_feature complement(order(2001700..2001702,2001736..2001738, 2001781..2001783,2001790..2001792,2001802..2001804, 2001838..2001840,2001892..2001894,2001901..2001903, 2001913..2001915,2001949..2001951)) /locus_tag="B565_1792" /note="TPR motif; other site" /db_xref="CDD:29151" gene 2002670..2005513 /locus_tag="B565_1793" /db_xref="GeneID:10487710" CDS 2002670..2005513 /locus_tag="B565_1793" /codon_start=1 /transl_table=11 /product="phage tape measure protein" /protein_id="YP_004392445.1" /db_xref="GI:330829493" /db_xref="GeneID:10487710" /translation="MPTSTTLKLALELAAKVTGREDLAALAGEVQALGPISDETAAET AQLAESLESLSRQQALIQQFNDSKAALTQLELATVLSRDKLEQLRRVQQAGSGDAKVL AEQERLLASEVKQLERQLVAQSASHTRLHAGLKQSGLDTKNLAQEQQRLQRELTKSVA QTERLGREFSQGSQQVGGLQGAIGSLTGRLVAMAGTWFGIQTLTTQLMAMFQTGDQAE RLDVQLKAVMGSIAGGKEASAWIQDFAKNTPLQLSEVTQVFVRLKAFGIDPMAGAMQG IVDQAFKLGGGFEEVQGISLALGQAWAKQKLQGEEILQLIERGVPVWQMLEQVTGKNT AELQKLSEAGKLGRETISALMNEIATQSRGAAADNMSLLSGLISNAQDNLAKFYRMVA ENGALAWLKNQLASLNAEFEAMARDGRLQAWAKRLSDGFISMGETLKSLIQALYEWRT ALTVLAQAWVGLKIAGWIGDLRSLYAQFIAMPMATATAAGGMTTAGTAAAGAAIGVRV LGAAVKGLLAAVAVESIIQITQFASALRQLVQAELALREAQTLRSETQARLNGQFAAL STELGFAITSMADLDRLVAEGKVHYDDATGSWRQGAAAVKALGDEAKSTRDYLAEINA VAKQTAADGPAKLAEAFKVLGLDFEQANGRIGAGFQKTIGALDVLVAHTGASSAAIEE ALAAAYNSAKTTAEIDAVIERQKQLAAQGKITGDALARSMAIAADAMAKVKGGSGDTA RSVAAIGDGFDEAAARAKGATDAMRAGLKGVQDEAKQTNASLASSGGGGGRGDITRTV NAGSFYYKSVDINSLRGNAEGLANTLAGVEEELARYSQKVKDIPAYSEWSKYYGEKFQ KEMEAMQARLKEELNKALAKESAKTNQAAAQPPAPAVAPSPPGPNSPGTRRPLSERIT IELKGAGGSAELQADEANANAFINILKQQGLRQ" misc_feature 2003297..>2003998 /locus_tag="B565_1793" /note="Mu-like prophage protein [General function prediction only]; Region: COG3941; cl09192" /db_xref="CDD:142184" gene 2005510..2005878 /locus_tag="B565_1794" /db_xref="GeneID:10487711" CDS 2005510..2005878 /locus_tag="B565_1794" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392446.1" /db_xref="GI:330829494" /db_xref="GeneID:10487711" /translation="MNVTLNSVLLPDDLVWRDEFEWAPVEQVVTPTLSGALLVEETAK PEGRPLTLSGHCSRAKVQELKVLEAQVARLMTLTLLDGVARSVVWRRPGVVATPLVEM ADPEGGDPYTLTLNLTEVTP" gene 2005875..2009468 /locus_tag="B565_1795" /db_xref="GeneID:10487712" CDS 2005875..2009468 /locus_tag="B565_1795" /codon_start=1 /transl_table=11 /product="Curculin-like (mannose-binding) lectin protein" /protein_id="YP_004392447.1" /db_xref="GI:330829495" /db_xref="GeneID:10487712" /translation="MTILSGDIVLLASQRLVDTDDGGGRITGREIISGNHNSMFPDIS DMDRAYGTVNMRKAFLAVQTDDTDTYYGANAMVLLPPSDPSVNLTLMTTKDHNDTRGN ARNTLERYQARGPKWQGVLYDTQLEGQRAIRILQRVEVRLPEVGEVLVLVGNEGKGNE VEQYVRVDRVTAELRKFGVAGYQGEFTRNVVTCVITDPLRYTFEGEQPSPYDQATTKT TLRETVVADAANYFSTTKMVADAALGAMRVQAKTIFTQLVPSARSETPVVDLTAAGEL GALLESGVGSPHTFTTTSPVSPSQGLFLGIGAMPGSVSVTIGAAVITDKGGELFLVGT VVGAIDYGRGLLTFNSQCPNYGAASKTVSFRPAVMPSRIADTAQIQIAANNRGYAYTA TLLPTPCPGSLTVSYLAQGKWYDLKDNGRGELFGQDKSYGSGLLNFTTGSVVLTLGAL PDVNSAIMFSWGTKVSYLNRASMVLDPVQLTHKLAHEGITPNSLTLTWQAGSATKTAI DNGAGQLTGDATGTVNYVTGDLALRVATLPDGGQEYQVVYQYGDPDTQRFDYPARNQD GTITLQLTKQNLTPRMVSVRWNALYEEVKDDTELVIAHHDPIISVRDNGAGKLLDAAG VERGTVNYTTGKITIKPDGQGGIPKTRYEWRTIGTYGDGHGNTIARQRWTLVEIYYVQ AAYLFPVDDSGWVEVEYRSNNASQAGQDTVKATPLVLDITPRNGEAILANSVRFALGG SVYVDRQGILYRNIDPATGAGEQAGTLDYATGKATVTVWNPGAAPVPALSSLVTSLVA QTVDEVTFRTPGAPIAPSSLYLSGNTADGRRFEVTANGDGTITSQDVTGKVDYQTGVV SVRFGRLVTAAGNEGKPWFDPDMVVDGKIWRPLSVVADTIRFNAVVYSYLPLDADLIK LDPVRLPSDGRVPFIRKGYIVVVHSTKRSAFPMGVQAGQQLNTGRERLAYCRVEDKNG KELAPQLYSVNMNSGMVTLASPLNLTGYVEPLTVVHRIEDMSLATDVEISGRITLARP LSHNYEATDTLVSSALIIGDLWARYGALFDQRTWTNNWSDFLIGDPCTAEYNDTDFPI VVTNRATLQERWAIIFQTTTTFILVGEHVGQIAVGDVNTDFAPINPNNGQPYFRLDRR GWGAGWAAGNVLRFNTYAANYPIWFIRTILQSVAAVDTDRFEAQLRGNVNR" gene 2009508..2010707 /locus_tag="B565_1796" /db_xref="GeneID:10487713" CDS 2009508..2010707 /locus_tag="B565_1796" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392448.1" /db_xref="GI:330829496" /db_xref="GeneID:10487713" /translation="MAEYKVKWFASEMQGAPSLGDTAEGALAALLKAVLVTGFGTLTI NALAFDAAKGWAMATFTGGHAYLQDSVVQVEGVSPAAYNGEHRVMQVTATQVWFEIDG GNPGAAGSGAAMTMKVAPLGWTITHESGDGKIFIVRPTNVSESGNVSLRIDNSAFSGW MGPTYLNYLAKVAMVEDVVDLNSYTTIGEWRWPCTGRFSNRRWDLVGDSQLFYFMPAY AAGSLQFMYSFGYIRSVRPGDRYHAVINHYPTNNANEAGRNWQGGSGGNTLWGNFYPY FDNASHRVIARPYHQLFGATNWFMKGLFGRFGNGLNIPNGPDNGFYVTQDPTMVIESG NHLRGYLPGLVCPFATIGAWDRKNFKDLPAMPGKLLRFVRVGYEENNYTWGQTCLMGF DLTGPWR" gene 2010711..2012291 /locus_tag="B565_1797" /db_xref="GeneID:10487714" CDS 2010711..2012291 /locus_tag="B565_1797" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392449.1" /db_xref="GI:330829497" /db_xref="GeneID:10487714" /translation="MATFLPSKGWLMLSAAQTITYDAALDVTATGGAEWADWFGETAD IGLFRYAYNKSGAADTGVWGGSIPFRPIGYRLKIGASNACWTNDLCDMDLEFLDAAGN VVAAIRTRTDGTYRSGLWYGPSLASLTKATQRDAYPRTYGELTFTPTSLIYTDDGGQH RNQSFTLTCNMAVVTTLRFSNMRSYETYTGGNGCRAETYLRIAGGPPGFNGDFAALTA EQYTALQPDLVLPAGAAVEHQSGVGLVASGTAPSYVLARGILPGQTGVLFDAAGAVVA KLAYLNGMAVLTVGGVTTQGPADAPYLGLAAINGQVFGYYQTKVFARSTQFIASTQYK IWIELQPGDRLARIGTEFVPLQVEFTYVLFTTPMTVTVANQETRAQFLPQDVAWQGKP PFYPGPLSIQQMSQRVICKGRDNFWIRDGVRNVEQGFIESTVTISGMGVRRRVLCFTQ DGELVGETYSRASDGVYRFDLLWLNRRYMVVAQDDPAYGPADYNAVAADYQAPKPYPP GGGVAPEPFPMIAPLKRK" gene 2012294..2012698 /locus_tag="B565_1798" /db_xref="GeneID:10487715" CDS 2012294..2012698 /locus_tag="B565_1798" /codon_start=1 /transl_table=11 /product="putative bacteriophage protein" /protein_id="YP_004392450.1" /db_xref="GI:330829498" /db_xref="GeneID:10487715" /translation="MISYAEGLRTSRAQLLATAIDTGTGASAKLTIYTGTKPAPGAAT TDQLALVVLTFSHPCAKTISGGVLTLKPLAEQMATASGAPTWGRIVDRDGAFVADLDV GVPGSGAELELPAAEFFAGALIRINTATITEP" gene 2012711..2014660 /locus_tag="B565_1799" /db_xref="GeneID:10487716" CDS 2012711..2014660 /locus_tag="B565_1799" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392451.1" /db_xref="GI:330829499" /db_xref="GeneID:10487716" /translation="MARKDASLALRKARSINGQLELNQSEVVRLVGILNSTNLPPRLS ASPGLVLASVLAGAPHRSSALLGGSVVLDAVLASHTHSRGELVGAFVIECTMASTSRA PLPVIAGAYDQNVFRGPASAMGDVWDRADRHSQALSSEWQKAGTERATSRSLWQQAAA HQQQVAELGEQMPQTFMANQQRFAEGLPVSQQSRQGYDSLAAGHVANQSLWVEAAPVS SWRLVGFTNPPRFDKVWLADQWQEGIPIGKGVAAQAWHHGQPLIEGWRDGWDEAMLPP KGKTPPPEPPKPPIRPDKRVLRLAFGRKRDTAELEFVWQGSDAAIVIPTRRVYLVSNT AKIVRVRDGLDLPATAVSIELDTDSWAWQFSAQIPCIAAAALTDEEEVSIHINGQQWD CVCDGWQSSQSFGRESATLTGRSRTAYLSPTHVLAQAVSEPAAATMAQLAAAVLPVGW TLDWQAADWLVPAGFFSLDNQTPIEVVRYLAEAAGGFVLPHQHNRHLVIKPRYPTVPW QLDTAVADVAIPRAIITILGSDFQPGHAANGIWVNGGHQGISARVVRQGTAGEQQAPT ITHPLVCDVTAARAQGVVGLAKTMPKRTQTIELPLSADTGLILPGALLAVDGWKGYNR GVRVSAALQSRAMTVRQQLSVERFV" gene 2014657..2014881 /locus_tag="B565_1800" /db_xref="GeneID:10487717" CDS 2014657..2014881 /locus_tag="B565_1800" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392452.1" /db_xref="GI:330829500" /db_xref="GeneID:10487717" /translation="MNLFKRFLELVPGADPLLVGTVTAVGTTTTTLNTLAGGVVTVRG TGVAIGKKAFYRGGELAGEAPDLPTYEIEV" gene 2015024..2015314 /locus_tag="B565_1801" /db_xref="GeneID:10487718" CDS 2015024..2015314 /locus_tag="B565_1801" /codon_start=1 /transl_table=11 /product="auxin efflux carrier" /protein_id="YP_004392453.1" /db_xref="GI:330829501" /db_xref="GeneID:10487718" /translation="MEGELDHLGLALKCNLLYLLAGGLSLLLAIWLLPLKTEWIPLLM LSVSLPPAVLNYMLCEQYHCQPDKVASIVLGGNALSVLVIPLAVWLALHLPG" misc_feature <2015138..2015293 /locus_tag="B565_1801" /note="Membrane transport protein; Region: Mem_trans; cl09117" /db_xref="CDD:189190" gene 2015490..2015954 /locus_tag="B565_1802" /db_xref="GeneID:10487719" CDS 2015490..2015954 /locus_tag="B565_1802" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392454.1" /db_xref="GI:330829502" /db_xref="GeneID:10487719" /translation="MGTSEQSDPVGQAKSRYDPALPTGYDWRRHRRFILSGGGYKAEC SRRNWFLELLNPVPYVVVRDIAIGGIGILGAIRLKEGDELVIAIPSGDKLRGLVVRSQ PDPLFPKLYRTGIRLHRYPTAELFARWQSYIQPQDKADFDHECQVLKQVRGA" gene 2016247..2018073 /locus_tag="B565_1803" /db_xref="GeneID:10487720" CDS 2016247..2018073 /locus_tag="B565_1803" /codon_start=1 /transl_table=11 /product="putative sigma-54-dependent transcriptional regulator YgeV" /protein_id="YP_004392455.1" /db_xref="GI:330829503" /db_xref="GeneID:10487720" /translation="MSNQCLLMQIQPTILRFAKMLASVLQLEVEIVDADMVRVAGTGP YGKFFGRQLEGDSRLLRYVIDNQREKIVTHTSDDPVCDGCTCKESCRERAFLGVPIMV DERCIGVISLVAFSDEQQARLNNNLQDVCDYVRHISTIFVAKLLDSRGLSDGVNKVFL NLMTNMDQGCLLLDDKSQLLYANEAALHHLGCQQEQLQGREVGIRPLTFSQQGLSGHL QHIITFEGRQELIIGQLHHVQGQQLFLMAFHQSHSGQVQEPDPDVRIDQLIGESKPMR TLKRLLHRIAQSPSSVLICGESGTGKEVVARAVHRLSPRQDKPFIAINCAAIPEQLLE SELFGYVKGSFTGASSGGKQGLIQAAHQGTLFLDEIGDMPLTMQAKLLRVLELREVTP IGASRPVPVDIRIIAATHQHLDQYIAEGKFREDLYYRINVIPLNLPPLREREGDVELL THYFLNLHTSRIGIVYPGLAPEVMALLKGYRWPGNVRELSNLIEYLVNVSQAGEVIDA SLLPPNIIRNQEPHRVAAQSIPVTNLDAAFNVPATAPLAATPEKLPDPVPGESGLESM EKQMIEETLQRLGNKKLAAQALGIGIATLYRKIKKYEIAVQS" misc_feature 2016289..2018061 /locus_tag="B565_1803" /note="Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:33622" misc_feature <2016421..>2016606 /locus_tag="B565_1803" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" misc_feature 2017072..2017545 /locus_tag="B565_1803" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 2017132..2017155 /locus_tag="B565_1803" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(2017135..2017158,2017348..2017350,2017474..2017476) /locus_tag="B565_1803" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 2017336..2017353 /locus_tag="B565_1803" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 2017531..2017533 /locus_tag="B565_1803" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 2017933..2018052 /locus_tag="B565_1803" /note="Bacterial regulatory protein, Fis family; Region: HTH_8; cl01091" /db_xref="CDD:186327" gene complement(2018228..2018304) /locus_tag="B565_t049" /db_xref="GeneID:10487721" tRNA complement(2018228..2018304) /locus_tag="B565_t049" /product="tRNA-Val" /db_xref="GeneID:10487721" gene complement(2018343..2018419) /locus_tag="B565_t050" /db_xref="GeneID:10490034" tRNA complement(2018343..2018419) /locus_tag="B565_t050" /product="tRNA-Val" /db_xref="GeneID:10490034" gene complement(2018454..2018530) /locus_tag="B565_t051" /db_xref="GeneID:10490035" tRNA complement(2018454..2018530) /locus_tag="B565_t051" /product="tRNA-Val" /db_xref="GeneID:10490035" gene complement(2018549..2018625) /locus_tag="B565_t052" /db_xref="GeneID:10490036" tRNA complement(2018549..2018625) /locus_tag="B565_t052" /product="tRNA-Val" /db_xref="GeneID:10490036" gene complement(2018639..2018715) /locus_tag="B565_t053" /db_xref="GeneID:10490037" tRNA complement(2018639..2018715) /locus_tag="B565_t053" /product="tRNA-Val" /db_xref="GeneID:10490037" gene complement(2018875..2020254) /locus_tag="B565_1804" /db_xref="GeneID:10490038" CDS complement(2018875..2020254) /locus_tag="B565_1804" /codon_start=1 /transl_table=11 /product="multidrug resistance protein MdtK" /protein_id="YP_004392456.1" /db_xref="GI:330829504" /db_xref="GeneID:10490038" /translation="MQRYWSEAKQLVRLASPILVAQVAQVAMNFVDTVMAGQVSAVDL AAVSVASSFWLPVILLVQGIIMALTPIVSQLNGARKREAIRPAVHQGFWLALIVTPLA MIALYYSPLALQFMDVEPVMAAKTTGYLHAILWGLPAFVMFQVLRNFSEGLSHTMPTM VIGFVGLAVNIPANYIFIHGHFGMPKLGGVGCGVATAIVLWAMLLAMILYVKLSRHFT EIRLFSQLARPNGSRIWRLFRLGFPIAMAIFCEVTLFTVVALMLAPFGAETVASHQIA LNFSSLVFMLPLSIGVGVTIRVGHSIGEGQPHHARVAARTGLMLGMAIAAATAAMTVL LREQIASIYTDDQQVIVLAAILLFFAAIYQISDSVQVVAAAALRGYKDTQAIFYVTIV AYWGLGLPTGMILGLTDWLVPRMGPQGFWIGFIVGLTSAALMLGARLRYIYGRFATPE ACTTLSRAQ" misc_feature complement(2018911..2020254) /locus_tag="B565_1804" /note="multidrug efflux protein; Reviewed; Region: PRK01766" /db_xref="CDD:179333" misc_feature complement(2019727..2020206) /locus_tag="B565_1804" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" misc_feature complement(2019049..2019528) /locus_tag="B565_1804" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" gene complement(2020404..2020610) /locus_tag="B565_1805" /db_xref="GeneID:10487722" CDS complement(2020404..2020610) /locus_tag="B565_1805" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392457.1" /db_xref="GI:330829505" /db_xref="GeneID:10487722" /translation="MMVYECCEAIRIAYNQIGSGEQGYVPKAIAATIRALNAVAADER VPAELREQAAYAAANLLISDHEDA" misc_feature complement(2020407..2020604) /locus_tag="B565_1805" /note="Uncharacterised protein family (UPF0253); Region: UPF0253; cl11640" /db_xref="CDD:187118" gene 2020741..2021643 /locus_tag="B565_1806" /db_xref="GeneID:10487723" CDS 2020741..2021643 /locus_tag="B565_1806" /codon_start=1 /transl_table=11 /product="Drug/metabolite transporter" /protein_id="YP_004392458.1" /db_xref="GI:330829506" /db_xref="GeneID:10487723" /translation="MLLSSRNSLAIFLTLFALLALTLKDGADKYLVLHGYSVMEMVWF RFFVPFLGLLLLLPRRTMSALLAVDRWLLLRSLLFLVCALVSVIALAHVPLNVYTIIC QLGSLAFVVAGVIFFRERLTRAKVAAVLLGLFGVLVVTHPDGGDANLYYLLPLVIVLA NTGYNLITKLVDPRLTTLDILIATCFMLGMVAMVALCWQPALWRFPGLADWPYLLALP VVTLLSQYCLIKAMQYAQASTLAPFFYFQIFFSTLCGYLMFGEMPTLSSMAGCLLIVL AGIVVIHSQRRARVLARSEAAEQV" misc_feature 2021227..2021586 /locus_tag="B565_1806" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene 2021746..2022363 /locus_tag="B565_1807" /db_xref="GeneID:10487724" CDS 2021746..2022363 /locus_tag="B565_1807" /codon_start=1 /transl_table=11 /product="riboflavin synthase subunit alpha" /protein_id="YP_004392459.1" /db_xref="GI:330829507" /db_xref="GeneID:10487724" /translation="MFTGIVQGVAELVAIEESASFRTHVIRMPSPAWGEGLALGASVA HNGCCLTVTRVEGELVSFDLMQETLRLTNLGKLQVGDKVNVERAARFGDEIGGHAMSG HIIGMAEVTSVIDTPKNRQVWYRLAPELMKYVLTKGYIGIDGISLTIGEVREREFCVH LIPETLARTNLGWVKAGWQTNIEIDPQTQAIVDTVERVLAARGGH" misc_feature 2021746..2022357 /locus_tag="B565_1807" /note="riboflavin synthase subunit alpha; Provisional; Region: PRK13020" /db_xref="CDD:183846" misc_feature 2021752..2022009 /locus_tag="B565_1807" /note="Lumazine binding domain; Region: Lum_binding; pfam00677" /db_xref="CDD:144321" misc_feature 2022046..2022300 /locus_tag="B565_1807" /note="Lumazine binding domain; Region: Lum_binding; pfam00677" /db_xref="CDD:144321" gene complement(2022538..2022741) /locus_tag="B565_1808" /db_xref="GeneID:10487725" CDS complement(2022538..2022741) /locus_tag="B565_1808" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392460.1" /db_xref="GI:330829508" /db_xref="GeneID:10487725" /translation="MIEYTSKRIVCPHCGHHTRVELDASQGDQEFYEDCMACCNPIHL RLHRDEARDCLQLFVDADDEQLF" gene complement(2023013..2023672) /locus_tag="B565_1809" /db_xref="GeneID:10487726" CDS complement(2023013..2023672) /locus_tag="B565_1809" /codon_start=1 /transl_table=11 /product="phosphatase YniC" /protein_id="YP_004392461.1" /db_xref="GI:330829509" /db_xref="GeneID:10487726" /translation="MLAAVIFDMDGVLIDSEPFWQRAQIAVFSELGHPHTVEDCESTI GVRIDQLVAHWYRLRPWSGPSQEEVVQRILDRVNALILSEGQAKAGVLEALDLIEARG LKVGLATSSPFAMVEAVLGKLGIRDRFMAVHSAEVERFGKPHPDVYIHAAEKLGVDPV HCLAIEDSFTGLLAAKAASMTALIVPDPALVGDPRLAIANYQLGSLAELNADMLASWV K" misc_feature complement(2023037..2023672) /locus_tag="B565_1809" /note="Predicted phosphatase/phosphohexomutase [General function prediction only]; Region: COG0637" /db_xref="CDD:30982" misc_feature complement(<2023268..>2023669) /locus_tag="B565_1809" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" misc_feature complement(2023118..2023429) /locus_tag="B565_1809" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature complement(2023346..2023348) /locus_tag="B565_1809" /note="motif II; other site" /db_xref="CDD:119389" gene complement(2023799..2024977) /locus_tag="B565_1810" /db_xref="GeneID:10487727" CDS complement(2023799..2024977) /locus_tag="B565_1810" /codon_start=1 /transl_table=11 /product="phosphoribosylglycinamide formyltransferase 2" /protein_id="YP_004392462.1" /db_xref="GI:330829510" /db_xref="GeneID:10487727" /translation="MFGTATRPGATRALLLGSGELGKEVAIELQRFGIEVIAADRYPN APAMQVAHAAHVLDMLDGNALRALVAEVKPDLIIPEIEAIATDTLASLEQEGVKVVPN ARATQLTMNREGIRRLAAETLGLPTSPYRFAQSKEEFVAAVEVIGLPCVVKPVMSSSG KGQSVLRDLAKLDESWTYAQEGGRAGRGKVIVEGFVPFEYEITLLTVRAVDGIHFCEP IGHRQEDGDYRESWQPQVMSELALARSKEVAAKVVEALGGYGLFGVELFIKGDEVWFS EVSPRPHDTGMVTLISQDLSEFALHVRAILGLPVGTITQYGPSASAVVLREGHSQDIR YQGIGEALALVPGAQLRLFGKPEIAGRRRLGVALARAADCQDAVEKAKAVAAKVEVLF " misc_feature complement(2023904..2024977) /locus_tag="B565_1810" /note="phosphoribosylglycinamide formyltransferase 2; Validated; Region: purT; PRK09288" /db_xref="CDD:181759" misc_feature complement(<2024837..>2024944) /locus_tag="B565_1810" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(2024099..2024620) /locus_tag="B565_1810" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" gene complement(2025063..2025926) /locus_tag="B565_1811" /db_xref="GeneID:10487728" CDS complement(2025063..2025926) /locus_tag="B565_1811" /codon_start=1 /transl_table=11 /product="drug/metabolite family transporter" /protein_id="YP_004392463.1" /db_xref="GI:330829511" /db_xref="GeneID:10487728" /translation="MAGAVWMMVAGLCFVAVNSLSQYVSFKLGLASTQVAFHQYLIAL ICLLPWLVRHGLRQSLMTNQFRLHLLRVLLAVVGIQLWLWALAYPVPIWQGIALLMTS PLFATLGSALLLKEQVSRARILATLAGFAGAMLILAPWTDEFNWASLLPVAAALFWAG YSLMVRYQAANESSHTIVVYLLIFSTPFNVMLALPEWQWPSESQWLLVAASGVLTALA QMSIARAYSVAEASFVQPFDFAKLPMNVVAGWLVFGWAPPGRLWLGAAIIIGAITLLT HLEQRAHKPVS" misc_feature complement(<2025141..2025488) /locus_tag="B565_1811" /note="phosphonate utilization associated putative membrane protein; Region: phn_DUF6; TIGR03340" /db_xref="CDD:163219" gene 2026072..2026767 /locus_tag="B565_1812" /db_xref="GeneID:10487729" CDS 2026072..2026767 /locus_tag="B565_1812" /codon_start=1 /transl_table=11 /product="acyl carrier protein phosphodiesterase" /protein_id="YP_004392464.1" /db_xref="GI:330829512" /db_xref="GeneID:10487729" /translation="MNKLSIYFRYQQISTMFRVTSIDSNAVQPTTKWSFTMANILVLK SSILGQYSQSNALIDGFLADHQDDAVTVRDLAALNLPVLDGELASGLRGGDNLNERQL AVIAQSDELIAELKASDLVVIAAPMYNFNIPTQLKNWIDLVARAGVTFRYTETGPVGM VENTRALVISPRGGMHVGSATDLVTPYMRTVLGFIGIKEVDFIYAEGMGMGPDAQSKG MEAAKAQLEALAI" misc_feature 2026180..2026761 /locus_tag="B565_1812" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:193819" gene complement(2026924..2027103) /locus_tag="B565_1813" /db_xref="GeneID:10487730" CDS complement(2026924..2027103) /locus_tag="B565_1813" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392465.1" /db_xref="GI:330829513" /db_xref="GeneID:10487730" /translation="MILMTRQSLLITLCTLLMISLFTPHLPQSTEQWLTTLLLGLLVA VALLLVRGCRRFMME" gene complement(2027267..2027455) /locus_tag="B565_1814" /db_xref="GeneID:10487731" CDS complement(2027267..2027455) /locus_tag="B565_1814" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392466.1" /db_xref="GI:330829514" /db_xref="GeneID:10487731" /translation="MDLKKFATMDINMLLSVVNMQLRDRYDDLDDLCKAQDIDQAALE ARLASGDFHYQPAQKQFR" gene complement(2027458..2027922) /locus_tag="B565_1815" /db_xref="GeneID:10487732" CDS complement(2027458..2027922) /locus_tag="B565_1815" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_004392467.1" /db_xref="GI:330829515" /db_xref="GeneID:10487732" /translation="MSKIIALLAHYPPYQLVHAAEMLRDTFEQFYEQRYQLTVPQWRL MMVLGPNYPISQKELVEASGMDKVRISREIRRLVEKGIIFTESSEQDKRISLVSLTNA GLALFLQLKSEAGSWQHTLTDYLPSESREAIRQHLHSVSAAIEQLQSLDREK" misc_feature complement(2027512..2027868) /locus_tag="B565_1815" /note="Transcriptional regulators [Transcription]; Region: MarR; COG1846" /db_xref="CDD:32031" misc_feature complement(2027572..2027826) /locus_tag="B565_1815" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene complement(2028093..2029307) /locus_tag="B565_1816" /db_xref="GeneID:10487733" CDS complement(2028093..2029307) /locus_tag="B565_1816" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392468.1" /db_xref="GI:330829516" /db_xref="GeneID:10487733" /translation="MNPSTRTRHLNQWIQSHSDQDMTYPALHGFLCARLVGPETPDWQ HPLAGLLEQDAELDEKSAEALNHLIAELESQADDAQLALPSQCRLPSDNPEQVFEQSH PLGQWCYGFSMGFATWPKPKDLNDPTTQYRFSLAAELSLFRDKQMAQMLYSAAASELP FVEFCKRQRQNMKTALNQLLNLDQYQAAPSADVALNGEQAQQWQTWFELADSCRDHQA RLGWFEKIIADATPLFDDAFWQQIAGHGWSAPELRPLLAARAGRADCLLRLGKLGEAK AEYLALLTICMADELGCRYNLSTLYALQGDWQVLAALLVRFDEASSWLLYNKALMLFA TEGAEAAKPHLLVAIEANPHIPACLLGQRKLPKQEPQSWQAGSRDEAALYAIHTREAW LKQNALIWLRKG" misc_feature complement(<2028948..2029283) /locus_tag="B565_1816" /note="Uncharacterised protein family (UPF0149); Region: UPF0149; cl01173" /db_xref="CDD:194060" gene 2029497..2030399 /locus_tag="B565_1817" /db_xref="GeneID:10487734" CDS 2029497..2030399 /locus_tag="B565_1817" /codon_start=1 /transl_table=11 /product="nucleic acid binding protein" /protein_id="YP_004392469.1" /db_xref="GI:330829517" /db_xref="GeneID:10487734" /translation="MINWPIRVMRKESTMIQIGKMNTLTVVELEDRGAWLAADEYGEL LLPKRQLPEGVKEGDSVQVFLYLDADCEPVITTDKPFAMVDEFAGLKVVNANKIGAFL DWGMKKDLFVPSREQNKPMQVGHVYLVRLQLDNEGRMVGTSRIERFLTPAGSNFKVGD EVTALPGEHSPLGIKVIVNGQYPGMLFKNEVFGRVMTGRPQTAWVKQVREDGKLDLTL QKPGLARVDDAGERILSRMKKQGGSLAVGDKSEPELIYKLFSMSKGTFKKAIGGLYKQ GKIVIEDNAITLVATETDSAVDSE" misc_feature 2029539..2030360 /locus_tag="B565_1817" /note="Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only]; Region: COG2996" /db_xref="CDD:32815" gene 2030401..2030712 /locus_tag="B565_1818" /db_xref="GeneID:10487735" CDS 2030401..2030712 /locus_tag="B565_1818" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392470.1" /db_xref="GI:330829518" /db_xref="GeneID:10487735" /translation="MPSPCVGLCKAKDGLCLGCGRTLTEIGHWSAMDSKAQLAVMAEL NGSKSTHRCPGCGEPAHCAVSAGQTIAQCWCSQLPVLPMQEASACWCRRCLAKAIAAQ D" misc_feature 2030404..2030565 /locus_tag="B565_1818" /note="Protein of unknown function (DUF1289); Region: DUF1289; cl01304" /db_xref="CDD:154323" gene complement(2030768..2031091) /locus_tag="B565_1819" /db_xref="GeneID:10487736" CDS complement(2030768..2031091) /locus_tag="B565_1819" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392471.1" /db_xref="GI:330829519" /db_xref="GeneID:10487736" /translation="MEQRTPDQLVEWAYDQFLEQAADMLAPEQIVDITLEFEQRGAVE ATLPNADWSTELGEPVDMERWVEVWVGLLDHQDEFEVIFATFLLPRLLTEDQVHVRWH RQQQA" misc_feature complement(2030783..2031085) /locus_tag="B565_1819" /note="Protein of unknown function, DUF440; Region: DUF440; cl11472" /db_xref="CDD:187058" gene complement(2031371..2032162) /locus_tag="B565_1820" /db_xref="GeneID:10487737" CDS complement(2031371..2032162) /locus_tag="B565_1820" /codon_start=1 /transl_table=11 /product="monofunctional biosynthetic peptidoglycan transglycosylase" /protein_id="YP_004392472.1" /db_xref="GI:330829520" /db_xref="GeneID:10487737" /translation="MAAPIIPDPDDPSHYQWESGPDAVAPVRPSASIGRRVLRWAGKI ALAGLLCSVGSVALLRFIDPPMWSWRIERALFPPAKITQVRHQWVDLESISKELQLAV IAAEDQRFADHNGFDMDAINAALKHNQHSERVRGASTLSQQTAKNLFMWSDRSFLRKG LEAWFTLLMELGWDKARILEVYLNIVEFGPGIYGAEAAARTYFGKPASRLTRYESSLL AAALPNPWRYRVKPPSPYVQKRSVWIRRQMGQLGQITLNRVHQAD" misc_feature complement(2031383..2032060) /locus_tag="B565_1820" /note="Transglycosylase; Region: Transgly; cl07896" /db_xref="CDD:195645" gene complement(2032147..2032473) /locus_tag="B565_1821" /db_xref="GeneID:10487738" CDS complement(2032147..2032473) /locus_tag="B565_1821" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392473.1" /db_xref="GI:330829521" /db_xref="GeneID:10487738" /translation="MSMNDEMHSVEELLDTALELFMELASDNLPEQEIARFNQEFNDR GLLAETDPADDWEADVGFAVSDTDYAEIWVGLGNEEQEYEHLFARMLLSRRVDEKFCH IEWLPQ" misc_feature complement(2032153..2032455) /locus_tag="B565_1821" /note="Protein of unknown function, DUF440; Region: DUF440; cl11472" /db_xref="CDD:187058" gene complement(2032671..2032937) /locus_tag="B565_1822" /db_xref="GeneID:10487739" CDS complement(2032671..2032937) /locus_tag="B565_1822" /codon_start=1 /transl_table=11 /product="cell division topological specificity factor" /protein_id="YP_004392474.1" /db_xref="GI:330829522" /db_xref="GeneID:10487739" /translation="MSLLDYFRSNKKQNTAQLAKERLQIIVAHERSSRGGPDYLPQLK QDILDVIRKYVNIDPEKITVQLDQKSDELSVLELNITFADDKKG" misc_feature complement(2032677..2032937) /locus_tag="B565_1822" /note="Septum formation topological specificity factor MinE; Region: MinE; cl00538" /db_xref="CDD:193859" gene complement(2032940..2033752) /locus_tag="B565_1823" /db_xref="GeneID:10487740" CDS complement(2032940..2033752) /locus_tag="B565_1823" /codon_start=1 /transl_table=11 /product="cell division inhibitor membrane ATPase" /protein_id="YP_004392475.1" /db_xref="GI:330829523" /db_xref="GeneID:10487740" /translation="MARIIVVTSGKGGVGKTTTSAALSTGLAQRGHKTVVIDFDIGLR NLDLIMGCERRVVYDFVNVINGEANLNQALIKDKRSENLFILPASQTRDKDALTREGV EKILDQLAEMKFDYIVCDSPAGIEAGALMALYFADEAIVTTNPEVSSVRDSDRILGIL ASKSRRAERGEDPIKEHLLLTRYCPTRVNRGDMLSVQDVQEILAIPLLGVIPESQAVL RASNSGEPVILDKESDAGQAYEDAVSRLLGDAKEFRFLEEEKKGFFSRLFGS" misc_feature complement(2032946..2033752) /locus_tag="B565_1823" /note="cell division inhibitor MinD; Provisional; Region: PRK10818" /db_xref="CDD:182756" misc_feature complement(2033036..2033668) /locus_tag="B565_1823" /note="Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a...; Region: MinD; cd02036" /db_xref="CDD:73299" misc_feature complement(2033633..2033641) /locus_tag="B565_1823" /note="Switch I; other site" /db_xref="CDD:73299" misc_feature complement(2033381..2033395) /locus_tag="B565_1823" /note="Switch II; other site" /db_xref="CDD:73299" gene complement(2033771..2034490) /locus_tag="B565_1824" /db_xref="GeneID:10487741" CDS complement(2033771..2034490) /locus_tag="B565_1824" /codon_start=1 /transl_table=11 /product="putative septum site-determining protein minC" /protein_id="YP_004392476.1" /db_xref="GI:330829524" /db_xref="GeneID:10487741" /translation="MVERDNELKGTTFTISVLHISDGEPERIRQLLAEKVAQAPYFFN CAPLVINVSRLEHIPDFEQLKELVESEEFVLVGITGARSEEMKTAAKAVGLAVMASGK SRKSEPEPEPAPAPAAPEVVPEPEPAPLIPSKVHVGPVRSGQQIYAAGTSLVVLGSVS PGAEVLADDSIHIYGTLRGRAIAGARGNTQARIYCQQLQAELLSIAGTFQLSDALPAG LIQQPVHVRLDNEQLRIDRIK" misc_feature complement(2033783..2034490) /locus_tag="B565_1824" /note="septum formation inhibitor; Reviewed; Region: minC; PRK04804" /db_xref="CDD:179880" misc_feature complement(2034179..2034472) /locus_tag="B565_1824" /note="Septum formation inhibitor MinC, N-terminal domain; Region: MinC_N; pfam05209" /db_xref="CDD:113960" misc_feature complement(2033777..2034076) /locus_tag="B565_1824" /note="Septum formation inhibitor MinC, C-terminal domain; Region: MinC_C; pfam03775" /db_xref="CDD:146423" gene 2034598..2034876 /locus_tag="B565_1825" /db_xref="GeneID:10487742" CDS 2034598..2034876 /locus_tag="B565_1825" /codon_start=1 /transl_table=11 /product="protein YcgL" /protein_id="YP_004392477.1" /db_xref="GI:330829525" /db_xref="GeneID:10487742" /translation="MLCAVYKSRKKAETYLFVEKREDFSRVPAPLLSAFGRPELVLMT KLDPAKPLGLADVGKVMAALTNQGFYLQVPPPPENLLEQHKASLKKPS" misc_feature 2034604..2034825 /locus_tag="B565_1825" /note="YcgL domain; Region: YcgL; cl01189" /db_xref="CDD:154255" gene complement(2035723..2035926) /locus_tag="B565_1826" /db_xref="GeneID:10487743" CDS complement(2035723..2035926) /locus_tag="B565_1826" /codon_start=1 /transl_table=11 /product="IS3 family transposase B" /protein_id="YP_004392478.1" /db_xref="GI:330829526" /db_xref="GeneID:10487743" /translation="MTDGYDCYQNALAERVNGILKGELLLQSPQDLTQAREMMREAVD IYNAERPHHALKYRTPDAVHRGF" misc_feature complement(2035747..>2035911) /locus_tag="B565_1826" /note="putative transposase OrfB; Reviewed; Region: PHA02517" /db_xref="CDD:177368" gene complement(2036544..2036942) /locus_tag="B565_1827" /db_xref="GeneID:10487744" CDS complement(2036544..2036942) /locus_tag="B565_1827" /codon_start=1 /transl_table=11 /product="IS3 family transposase A" /protein_id="YP_004392479.1" /db_xref="GI:330829527" /db_xref="GeneID:10487744" /translation="MGQGVKRTQRDYSLTFKLALVEQIEKGELTYKQAQVRYGIQGRS TVLVWLRKHGRQDWSQGASVRAGRSITMPDPDNQTPEQRIKELEQQLALMSQKAQFFE AVVDVLKNDYGVSIVKKRPGKSSRSGKSRG" gene complement(2037055..2038425) /locus_tag="B565_1828" /db_xref="GeneID:10487745" CDS complement(2037055..2038425) /locus_tag="B565_1828" /codon_start=1 /transl_table=11 /product="L-serine dehydratase 1" /protein_id="YP_004392480.1" /db_xref="GI:330829528" /db_xref="GeneID:10487745" /translation="MISVFDIFKIGVGPSSSHTVGPMKAAKQFVDELRAGGKIRDVTR INVDVYGSLSWTGKGHHTDTAIIMGLAGNLPENVDIDAIPEFISRVEQTERLPIGLHC HTVSFPRDAMVFHDEALPLHENGMKLTALIEDEVVYSKTYYSIGGGFIVDEENFGKAD SGDMSVRYPFKSAAELVAHCSQTGLSISALMMENEKCFNTPEEIYKKFGKIWNTMREG IERGCRTEGVLSGPLRVPRRAAPLYRQLNTNENLSSDPMNIVDWVNMFALAVSEENAA GGRVVTAPTNGAAGIIPAVLAYYDKFIQPVGRDEYTRFYLAAGAVGILYKMNASISGA EVGCQGEVGVSCSMAAAGLTELMGGSPEHVCEAAEIGMEHNLGLTCDPVAGQVQVPCI ERNAIAAMKAVNASRMALRRTSKPRVSLDKVIETMYITGKDMDSKYRETSRGGLAIKV MQVACE" misc_feature complement(2037076..2038422) /locus_tag="B565_1828" /note="L-serine dehydratase, iron-sulfur-dependent, single chain form; Region: sda_mono; TIGR00720" /db_xref="CDD:188076" misc_feature complement(2037952..2038398) /locus_tag="B565_1828" /note="Serine dehydratase beta chain; Region: SDH_beta; pfam03315" /db_xref="CDD:190598" misc_feature complement(2037079..2037882) /locus_tag="B565_1828" /note="Serine dehydratase alpha chain; Region: SDH_alpha; cl12120" /db_xref="CDD:196345" gene complement(2038511..2038735) /locus_tag="B565_1829" /db_xref="GeneID:10487746" CDS complement(2038511..2038735) /locus_tag="B565_1829" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392481.1" /db_xref="GI:330829529" /db_xref="GeneID:10487746" /translation="MAASPLTLPNVKKRQMTPFGSEMPGIAGYFYGQTLNKMDKHKNK FYTRASDSTKIDLFQLFLGLEPLHYGYLVL" gene complement(2038701..2040086) /locus_tag="B565_1830" /db_xref="GeneID:10487747" CDS complement(2038701..2040086) /locus_tag="B565_1830" /codon_start=1 /transl_table=11 /product="L-serine dehydratase 2" /protein_id="YP_004392482.1" /db_xref="GI:330829530" /db_xref="GeneID:10487747" /translation="MISVFDLFSIGIGPSSSHTVGPMRASYAFVQQLKLQGHLPQVTR VEVECYGSLGQTGKGHGTGKAIILGLSGFEPESVDIEAIPAILARVEKEQNLQLAGEQ PSHFPRTGAIIFNRRKTLPAHTNGMTLRSFDKEENLRFSQTYYSIGGGFIIEESHFAT AKEEAAKSDAKHPVPYPFDSGAQLLAHCQESGLSISGLILANERVFRSDEQIKAGLRK IWQAMQGCVERGCKSEGVLPGGLKVRRRAPGLFRQLSCETNFNKDPLMVMEWVDLFAL AVNEENAAGGRVVTAPTNGAAGIIPAVLHYYDRFVHKVDDETLIRYFLTAAAIGILYK KNASLSGAEVGCQGEVGVACSMAAGALTELLGGSPAMVENAAEIGMEHNLGLTCDPIG GLVQVPCIERNAMGAVKAINAARLALRGTGEHKVSLDKVIKTMWETGNDMKTKYKETA RGGLAVNITEC" misc_feature complement(2038713..2040083) /locus_tag="B565_1830" /note="L-serine dehydratase, iron-sulfur-dependent, single chain form; Region: sda_mono; TIGR00720" /db_xref="CDD:188076" misc_feature complement(2039610..2040059) /locus_tag="B565_1830" /note="Serine dehydratase beta chain; Region: SDH_beta; pfam03315" /db_xref="CDD:190598" misc_feature complement(2038716..2039522) /locus_tag="B565_1830" /note="Serine dehydratase alpha chain; Region: SDH_alpha; cl12120" /db_xref="CDD:196345" gene complement(2040241..2040525) /locus_tag="B565_1831" /db_xref="GeneID:10487748" CDS complement(2040241..2040525) /locus_tag="B565_1831" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392483.1" /db_xref="GI:330829531" /db_xref="GeneID:10487748" /translation="MLKVNEYFDGNVKSIGFEQKGEKSTVGVMNAGDYLFNTAAPERM TVIKGALTIQLADEDEWHTYSQGESFLVAGHSSFKLEVKTPTAYLCEFLD" misc_feature complement(2040247..2040525) /locus_tag="B565_1831" /note="Protein of unknown function (DUF1255); Region: DUF1255; cl01202" /db_xref="CDD:186381" gene 2040796..2042037 /locus_tag="B565_1832" /db_xref="GeneID:10487749" CDS 2040796..2042037 /locus_tag="B565_1832" /codon_start=1 /transl_table=11 /product="proton/glutamate symporter" /protein_id="YP_004392484.1" /db_xref="GI:330829532" /db_xref="GeneID:10487749" /translation="MLTKGLIKNIGFQVVVAMVLGAVVGAFMGEQATVFAPLGTLFIQ LIKMLVIPLVAVAILSGAANLGASPAAGKIGAATLAFFLVTSALAVLLALVMGQIFKP GVGVDFASVASMFGGDYADKGALPDAVATLLGMIPTNVFNSLNEANILQILVFCMFLG IALAKQPRERAKPLVDGLNTLVDAFVWMINKVMIIAPLGVFGLMAEAIGTYGFDVLTL VLKLFVVYVAAILIFGFVVYPLLVMMFSNTPVMKYLSAMKKPQIVAFSTASSMATLPV NMETCEHDLKVTNATASFVLPLGATINMSGNAIYYGLVAIFFAQVYNIDLSVGAWAAI IVTSTLGAIGQAGVPGPSFLVVAVLLAAGIPIEGLPLLFALDRLFDMIRTSLNITGDA ACAVIVDRFSPEYDPQRWNKA" misc_feature 2040883..2041998 /locus_tag="B565_1832" /note="Sodium:dicarboxylate symporter family; Region: SDF; cl00573" /db_xref="CDD:193876" gene complement(2043666..2044637) /locus_tag="B565_1833" /db_xref="GeneID:10487750" CDS complement(2043666..2044637) /locus_tag="B565_1833" /codon_start=1 /transl_table=11 /product="6-phosphofructokinase isozyme I" /protein_id="YP_004392485.1" /db_xref="GI:330829533" /db_xref="GeneID:10487750" /translation="MTKQIKRIGVLTSGGDAPGMNAAIRAVVRAGLHHGLEVYGIYDG YLGLHQDRIVKLERHSVSDVVNRGGTFLGSARFPAFKDPAVRAEAIENLKKHGIDALV VIGGDGSYMGAKKLTEEGFPCIGLPGTIDNDIAGTDFTIGFDTALNVVVDAIDRLRDT CSSHHRISVVEIMGRHCGDLAMSAAVAGGAEYVIVPEVAFDKEKLLKQIKEGEAKGKK HAIITICEHVTDVNALAKDIEALTGRETRATILGHIQRGGAPTARDRIMSSRMGAYAV EQLLAGHGGRCVGIQRNELVHHDIIDCIENMKRPFDQELYNLSTTLF" misc_feature complement(2043669..2044625) /locus_tag="B565_1833" /note="6-phosphofructokinase; Provisional; Region: PRK03202" /db_xref="CDD:179553" misc_feature complement(2043672..2044622) /locus_tag="B565_1833" /note="Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent...; Region: Bacterial_PFK; cd00763" /db_xref="CDD:29438" misc_feature complement(order(2043870..2043872,2043879..2043881, 2043960..2043962,2044113..2044121,2044239..2044241, 2044245..2044247,2044251..2044253,2044302..2044307, 2044311..2044319,2044410..2044412,2044503..2044505, 2044593..2044595)) /locus_tag="B565_1833" /note="active site" /db_xref="CDD:29438" misc_feature complement(order(2044302..2044307,2044311..2044319, 2044410..2044412,2044503..2044505,2044593..2044595)) /locus_tag="B565_1833" /note="ADP/pyrophosphate binding site [chemical binding]; other site" /db_xref="CDD:29438" misc_feature complement(order(2043672..2043677,2043762..2043764, 2043807..2043809,2043828..2043830,2043840..2043845, 2043987..2043989,2044071..2044073,2044077..2044082, 2044164..2044166,2044173..2044175,2044185..2044187, 2044221..2044223,2044440..2044442,2044449..2044451, 2044464..2044466,2044551..2044553,2044563..2044565)) /locus_tag="B565_1833" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29438" misc_feature complement(order(2043981..2043989,2043993..2043995, 2044065..2044067,2044071..2044073,2044164..2044166, 2044449..2044454,2044461..2044466,2044551..2044553, 2044563..2044565)) /locus_tag="B565_1833" /note="allosteric effector site; other site" /db_xref="CDD:29438" misc_feature complement(order(2043870..2043872,2043879..2043881, 2043897..2043899,2043960..2043962,2044113..2044121, 2044140..2044142,2044239..2044241,2044245..2044247, 2044251..2044253)) /locus_tag="B565_1833" /note="fructose-1,6-bisphosphate binding site; other site" /db_xref="CDD:29438" gene complement(2044787..2045542) /locus_tag="B565_1834" /db_xref="GeneID:10487751" CDS complement(2044787..2045542) /locus_tag="B565_1834" /codon_start=1 /transl_table=11 /product="Triosephosphate isomerase" /protein_id="YP_004392486.1" /db_xref="GI:330829534" /db_xref="GeneID:10487751" /translation="MRQHLVMGNWKLNGTKASVEALIKGLTPAAAAHPSVQVAVCPPV IFLGLVEQLTAGSKIAYGAQNADVHESGAFTGENAPSMLKAFGCTYSLVGHSERRTLH AETDDVVAAKYEAIQKGGLVPVLCIGETLEQFEAGVTKNVVETQLKAVIDRCGIASFN NAVIAYEPVWAIGTGKTATPEIAQSVHAHIRQYLAGFDAAVAAKVQILYGGSVTGATA ADLFGQPDIDGGLVGGASLKVDDFSQIIAGAAK" misc_feature complement(2044805..2045530) /locus_tag="B565_1834" /note="Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually...; Region: TIM; cd00311" /db_xref="CDD:73362" misc_feature complement(order(2044841..2044846,2044850..2044852, 2044907..2044909,2045024..2045026,2045042..2045044, 2045258..2045260,2045510..2045512,2045516..2045518)) /locus_tag="B565_1834" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73362" misc_feature complement(order(2045249..2045254,2045285..2045290, 2045297..2045299,2045351..2045353,2045390..2045392, 2045399..2045401,2045405..2045413,2045507..2045509, 2045516..2045518)) /locus_tag="B565_1834" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73362" misc_feature complement(order(2045042..2045044,2045258..2045260, 2045510..2045512)) /locus_tag="B565_1834" /note="catalytic triad [active]" /db_xref="CDD:73362" gene complement(2045678..2046448) /locus_tag="B565_1835" /db_xref="GeneID:10487752" CDS complement(2045678..2046448) /locus_tag="B565_1835" /codon_start=1 /transl_table=11 /product="integral membrane protein" /protein_id="YP_004392487.1" /db_xref="GI:330829535" /db_xref="GeneID:10487752" /translation="MFVIKKWLGQLLMPLPFSLSLLLVALLLLWFTRFQKTGKLLATL SLLIVALMGMRPVSYELARGLEQTFPPFEASQHPNIEAIVVLGNGHVSDPAVPMRSWQ NNISLARTLEGVRLAQAYPDAELVFSGYVSGDTLSNAEVNARMAESLGIPRSRMTLFE NNKDTHDEAVSISRHLKGKEVALVSSATHLPRAMALYQGQGLKAVPAPTDYTAKQSQV PQPLYSYLPKGRYLMYSEAAIHEWIGVWWARLRGQVNE" misc_feature complement(2045714..2046208) /locus_tag="B565_1835" /note="YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been...; Region: YdcF-like; cd06259" /db_xref="CDD:99750" misc_feature complement(order(2045726..2045728,2045873..2045875, 2045882..2045884,2045894..2045896,2045945..2045947, 2045954..2045956)) /locus_tag="B565_1835" /note="putative active site [active]" /db_xref="CDD:99750" gene 2046535..2047326 /locus_tag="B565_1836" /db_xref="GeneID:10487753" CDS 2046535..2047326 /locus_tag="B565_1836" /codon_start=1 /transl_table=11 /product="type 11 methyltransferase" /protein_id="YP_004392488.1" /db_xref="GI:330829536" /db_xref="GeneID:10487753" /translation="MLSFSLKHDQSFDGRADKFARNIYDSTKGRIRTTIVWSDIEACL ARLGNRPLRILDAGGGFGYFAQKLAAMGHQVELCDLSAEMLELARSQIAEKGLEDKIR LIHCPIQDLKQHVTGTFDLVLCHAVLEWLAEPRQTLLGLFPFVNAGGILSLLFYNRHG LLFQSLVVGNFDYVRLGLRKKRQTALTPTNPQLPEQVYDWIGRGGLRIIGKTGVRVIH DYMRHKQDQVEKFDDLLAMEHQYCRQEPFVSLGRYIHVMAQKPAS" misc_feature 2046691..2047002 /locus_tag="B565_1836" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature order(2046703..2046723,2046769..2046774,2046850..2046858, 2046907..2046909) /locus_tag="B565_1836" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 2047505..2048761 /locus_tag="B565_1837" /db_xref="GeneID:10487754" CDS 2047505..2048761 /locus_tag="B565_1837" /codon_start=1 /transl_table=11 /product="MukF protein" /protein_id="YP_004392489.1" /db_xref="GI:330829537" /db_xref="GeneID:10487754" /translation="MSLPTDRLAFLIAIKTLSEDESDLSEAALHDAFGYVSSAFGQMD ETLTGRANNAINDLIRQQLLSRFNTDMVAGESLYRLSRLGVSIVDFFMDQRQVDSIKL SILLEHLAAELDTARKAALETNTREQWDAEVLPRLTFSLEETLGRIDLTQRAMDEQQN QVKSEIAALLTQNWVDAIHSCEKLLHETGQTLRELQDTLDAAGHRLQAGLLNIQEAAQ GRDDLFHVEELTHALQGRLDVITSWGQQCIELWSRYDRHVHKFIRNAIDMDKNRAFSQ RLRESIRNFEQHNWQLRVAEEPRLLELRDETIAIHDEEVTGEVPLEMEYVEMVDINQE LAERIERYLARYPEQGQQLDLADVLREYLLDYPAHAHFDVARLLIDQAVRLGHASGER ELHRQPAWKPINQAGSKVQAYVIDQY" misc_feature 2047505..2048758 /locus_tag="B565_1837" /note="KicB killing factor; Region: KicB; cl11468" /db_xref="CDD:187055" gene 2048742..2049461 /locus_tag="B565_1838" /db_xref="GeneID:10487755" CDS 2048742..2049461 /locus_tag="B565_1838" /codon_start=1 /transl_table=11 /product="chromosome partition protein MukE" /protein_id="YP_004392490.1" /db_xref="GI:330829538" /db_xref="GeneID:10487755" /translation="MSLINTEFPLPLRLAEAIANPLFPRIDTALRSGRHISADEFEQH SALVEYHSELEIFYGRYQVELIKAPEGFFYLRPRPSSDIGTTVLSELDMLVGKVLCYL YLSPDRLASEGVFAMAELQEEVLSLADEKQLLRMVNSRSGGTDLDKKKLLEKIRTSMR RLRRLGMITALGNGDKFRVNESVFRFAADVRSDEDPRAVQLRMIQEGEAIFHDDEMPS SDSLFDDIEADLDEEQLDLEV" misc_feature 2048742..2049407 /locus_tag="B565_1838" /note="MukE-like family; Region: MukE; cl11471" /db_xref="CDD:187057" gene 2049465..2053892 /locus_tag="B565_1839" /db_xref="GeneID:10487756" CDS 2049465..2053892 /locus_tag="B565_1839" /codon_start=1 /transl_table=11 /product="chromosome partition protein MukB" /protein_id="YP_004392491.1" /db_xref="GI:330829539" /db_xref="GeneID:10487756" /translation="MRGKFKSLTMVNWNGFFARTFDLDQLVTTLSGGNGAGKSTTMAA FIAALIPDQSLLHFRNTTEAGSSSASRDKGLYGKLQRGHCYSLLEVMNSREQRIWVGV HLEQVANRDNKVNITPFALVDVPENLAPTDLLLEKLDGGKGRVRAFTDLKGAAAELGA MKVAKFNTVTDYHNFMFEFGITPKKLRDQKDRGKFYRLIEASLYGGISSSISRSLREY LLPENSGVRKAFADMEAAIYENRRTLEAIKETQGQRDLFKNLITETTHYVAADYVRNA AEKSRLSELALKARQELADKRRILAEEKQRAIYLADEVEQLTNREKLLTDELESASEH LAKVMAAVSLQKKIEMYRADLADLSDKLEQQQAVVEEIHGQLLEVEERKELAQAEVDS LKTQLADYQQALDIQQTRAIQYRQAVQALDAAREQCELPGLTAEQASDTLHQFRAAEQ SLTSRVLGAEQQLALAKAAVAEHEAALALLLSIAPETVREAAWLTAQALLKRHIEDKA RIAQGQGLRAALARLEKESESQKSLFKLRDELQQASGQLIASSDELEIFLEAQRTRQE ELSEQQAEVNQRRASLEHQGTQLGRDIAELTKLAPRWLKSFEKLEQLREQSGLPLATA EELSAGMQTVLDKEREFEQESNRIAAQKQALELQIRNLQLGAGEADPRLARIAEQVGG VLLSDVYDDISIDDAPYYSALYGPARSALVVLDLEGAIERLKKLEDCPEDIYLIQGNP DSFDEDLVEADELGDAVLVRTSKRQVRFSRYPELPLFGRAAREKRIEQLDLEREGLIE GYAKAAFEQQKYHRLYGHFRDFIGQHLDIAFRPDPEAEVQGKQAELRALQGAIGECDK QLAEAKAAAAQLTRHIQLVQGMLPFAHLFAETDLAARLEAAHADVEALKQAEAFIAKH GKSLEKLETMVQVLRQDPQDLAALQAAYDEVSDLLAEQKRRCYALDQLVARLPHFAYQ DAQDLLGKASEMSERLKEKLKTAELAARTAGEQHKQIAQRHTEALQLRTALNSSVEAK RQTLTEFEQELAAMGLTLSDDMEEKARAHKKEIEELLIRTRSRRTSAEAQLQVTKREI ESLGGRLKLEGKDYYSARKSLVGHKASWSRVVRLARETDVEKRLNKRELAYLDSDELR SMSDKALGALRVAVAHDEALRDALRLSEGNRSTEQKVAFYVQVYRYLKDRIRNDIIRS DDPVEAIEEMEIELARLADELKQRETHLSLSSHEVAAKITNIIRREQNRIRVLNQGLQ NIAFGLVRGVRLNVNIREAHTRLLTALADQTAMHNDLFADKELSFSEAMAKLFQRLNP QIEQGDRSYQVMGDVLLDYRNYLELEIEVQRGADGWLRAESGALSTGEAIGTGQAILL MVLISWEEESRRLRGKDIAPCRLLFLDEAARLDGKSIATLFELCERQDMQLLIAAPEN ISPEKGTTYKLIRKVQGKHEHVHVVGLRGFGFADDKLIA" misc_feature 2049465..2053889 /locus_tag="B565_1839" /note="cell division protein MukB; Provisional; Region: mukB; PRK04863" /db_xref="CDD:179887" misc_feature 2049468..2050139 /locus_tag="B565_1839" /note="MukB N-terminal; Region: MukB; pfam04310" /db_xref="CDD:113093" gene 2054152..2054538 /locus_tag="B565_1840" /db_xref="GeneID:10487757" CDS 2054152..2054538 /locus_tag="B565_1840" /codon_start=1 /transl_table=11 /product="Rare lipoprotein A" /protein_id="YP_004392492.1" /db_xref="GI:330829540" /db_xref="GeneID:10487757" /translation="MQHIQKGLLLSLCLLLAACSSRYDESHGGSWRGYSETGYASYYA DRYHGKKTASGEIYRNNLNSAAHMELPFGAMVRVTNLANGKSVVVKVNDRGAFKKGRI IDLSKSAFSTIGNIRDGIIKVKIEVL" misc_feature 2054254..2054526 /locus_tag="B565_1840" /note="Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Region: DPBB_1; cl04011" /db_xref="CDD:186611" gene 2054772..2055224 /locus_tag="B565_1841" /db_xref="GeneID:10487758" CDS 2054772..2055224 /locus_tag="B565_1841" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392493.1" /db_xref="GI:330829541" /db_xref="GeneID:10487758" /translation="MIIYGKYGGAALRAVHLMVQNNYGHATAWDMAIAEAFGGDISTG KFKNNPKVTFLTLCSLGCISCIMPVHYVAATKTRAYVLAAIDLLSHKDITKPINPEQL WLEVISACKSGKVVKHNNQMDVILTLWYAGVLNPEWDRDAIRIDYRRI" gene complement(2055261..2055887) /locus_tag="B565_1842" /db_xref="GeneID:10487759" CDS complement(2055261..2055887) /locus_tag="B565_1842" /codon_start=1 /transl_table=11 /product="putative signal peptide protein" /protein_id="YP_004392494.1" /db_xref="GI:330829542" /db_xref="GeneID:10487759" /translation="MNKVILPIALITCATLAHAESSTIINGLDFGPLAQLAGTWKSTD AGGVDVAPGQEGSKVGKGGPAVEPFYEVITFEPAADAKNASEQYLVAMYYKQEVFRKS DNGKFHDQRGYLIYDKTNQLVYNSYCIPRAVCVVTEGKAGNKIEFKAGKRGIAESNYM TINDSTTDFSMTLDFSEKDLLKYSQTTNLMVYGKPFAHSDSASLTRTN" misc_feature complement(2055270..2055797) /locus_tag="B565_1842" /note="nitrobindin heme-binding domain; Region: nitrobindin; cl10502" /db_xref="CDD:195978" misc_feature complement(order(2055288..2055293,2055321..2055323, 2055327..2055329,2055333..2055335,2055387..2055389, 2055393..2055395,2055501..2055503,2055564..2055569, 2055594..2055596,2055681..2055683,2055717..2055719, 2055726..2055731)) /locus_tag="B565_1842" /note="heme-binding site [chemical binding]; other site" /db_xref="CDD:143652" gene complement(2056186..2056389) /locus_tag="B565_1843" /db_xref="GeneID:10487760" CDS complement(2056186..2056389) /locus_tag="B565_1843" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392495.1" /db_xref="GI:330829543" /db_xref="GeneID:10487760" /translation="MYSYTLTFKEDVDRLTAPEQEITLQSPAQAGDFIILSDGSRHQV MFVTHRAHYSSLYLDKGVRVPQS" gene complement(2056869..2058110) /locus_tag="B565_1844" /db_xref="GeneID:10487761" CDS complement(2056869..2058110) /locus_tag="B565_1844" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392496.1" /db_xref="GI:330829544" /db_xref="GeneID:10487761" /translation="MTDATDPSPSSSWHLSDIRELAHLLTLALPAAVEITEAVHQAVL SGMGLKGRDEGKTAGITGLVYKGVHGTANNLSSGINHLLSRLPATPPPHQIPETPKRA ALIATLNGVLGDKLVEHHNALATPMTLRYQGKPLDWQAIPEDLLREGRVLLMIHGLCM NDLQWQTEHQGKPVNHGEQLAAVLGYQPLYLRYNSGLPITQNGQQLALLLEQLFAHWP GELKEITIIGYSMGGLVARSACHHAGVTGLTWPVRLVNLIFLGTPHHGAPLEHAGHWL EQLLPATAYSEPFVRLARLRSAGIKDLRHGKAIETLAPPNPAVPLRDPRVPLPLPCSV NCYAIAATTAAKRSLLADRLIGDGLVPLRSALGQHSEARHQLAFLPAHTLIVYRTSHM ALLASPQVGQQLLRWLSPLQL" misc_feature complement(<2057304..2057750) /locus_tag="B565_1844" /note="Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]; Region: LipA; COG1075" /db_xref="CDD:31273" misc_feature complement(<2057289..>2057441) /locus_tag="B565_1844" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" gene 2058323..2059327 /locus_tag="B565_1845" /db_xref="GeneID:10487762" CDS 2058323..2059327 /locus_tag="B565_1845" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392497.1" /db_xref="GI:330829545" /db_xref="GeneID:10487762" /translation="MSLFNEVRVQDLCARLLDSQNEKGCSLESRHGRELKDLLQAVGG IKPVGRGAHYVLTDAGRTFLTGQLARAAPPEPDKGEQLQRMGVSLPARLNQACFYALW HGDSKHSRSASLAAPQLVELSLTQDEVIRIRTLEPLSLVDQQGQQHDMTAMMALLGEL ALPERTLGTLAAIGWQGELVITVENKGAFVDYPLQPGQLLLFAPGRNTTLAKQLIPLL PAGVQWAHFGDLDQRGIDIAIELARELNRPAMLWLPCELQPYLEHYARPVRTFATDSG KVPWRVTTQADQVDGHGAPAGVPWLDKLITDGTWLEQEVLILAPHWRSWSLDAMGNQG " misc_feature 2058707..>2059135 /locus_tag="B565_1845" /note="Topoisomerase-primase domain. This is a nucleotidyl transferase/hydrolase domain found in type IA, type IIA and type IIB topoisomerases, bacterial DnaG-type primases, small primase-like proteins from bacteria and archaea, OLD family nucleases from...; Region: TOPRIM; cl00718" /db_xref="CDD:193916" gene complement(2059369..2059962) /locus_tag="B565_1846" /db_xref="GeneID:10487763" CDS complement(2059369..2059962) /locus_tag="B565_1846" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392498.1" /db_xref="GI:330829546" /db_xref="GeneID:10487763" /translation="MSRNAALLITLTLLGIAPAQAISAKYAEQLERSGCTQVTEAQGC DIHKTKAENAKAGFGTAAPAAEGGLNLSYEQKLERSGCTQVSELNGCDINKTKAENAA AGVGNAPAAATSASPYAGNWIATFPQTGATVANIRIDGKDQVWVNDKKVNAKKSDGAL VFKDGMVIYTIQGDRRIKGEDGWVDNDAGTKGPINAK" gene 2060570..2061757 /locus_tag="B565_1847" /db_xref="GeneID:10487764" CDS 2060570..2061757 /locus_tag="B565_1847" /codon_start=1 /transl_table=11 /product="aspartate/ornithine carbamoyltransferase" /protein_id="YP_004392499.1" /db_xref="GI:330829547" /db_xref="GeneID:10487764" /translation="MKAVNELIKEIRALKSNLHEKDFLLTWEQTPQELELVLKLAESL KTLRAENICTKLFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGE TVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDEGFEKGVLPQRPALVNLQC DIDHPTQSMADLAWLQEHFGSLDSLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFG MDVTLAHPEGYDLIPDVIEVAKENAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKV MEQRTELLRANDHAGLKELEKHCLEQNAKHKDWHCTEEMMKLTKGGEALYMHCLPADI SGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMIMARKFSAPAETLENLIKEAQK RVK" misc_feature 2060570..2061754 /locus_tag="B565_1847" /note="aspartate/ornithine carbamoyltransferase family protein; Validated; Region: PRK07200" /db_xref="CDD:180878" misc_feature 2060630..2061103 /locus_tag="B565_1847" /note="Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Region: OTCace_N; pfam02729" /db_xref="CDD:190401" misc_feature 2061125..2061682 /locus_tag="B565_1847" /note="Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Region: OTCace; pfam00185" /db_xref="CDD:189438" gene 2061895..2063094 /locus_tag="B565_1848" /db_xref="GeneID:10487765" CDS 2061895..2063094 /locus_tag="B565_1848" /codon_start=1 /transl_table=11 /product="diaminopropionate ammonia-lyase" /protein_id="YP_004392500.1" /db_xref="GI:330829548" /db_xref="GeneID:10487765" /translation="MSQFSLKMDIADNRFFTAEPSPLFSRAEAQKARAFHKKLAGYEP TPLCDLKDLAAYIGVKNILVKDESKRFGLNAFKMLGGVYAIANLLCEKYGVAIEDFSF DLIKRTIKEPMTFATTTDGNHGRGVAWAAKQVGQHAVVYMPKGSAQERVDHILNLGAE CIVTDMNYDDTVRLTMKMAEERGWHIVQDTAWEGYTKIPTWIMQGYSTLADEAVEQMQ DMGIKQPTHVLLQAGVGALAGGVLGYLVDCFGAKNLHSIVVEPAQADCIYRSGVAGEM VNVGGDMRTIMVGLACGEPNPLGWPLLRSCTTQFISCHDKVSALGMRVLGNPLGNDPR IISGESGSVGTGVLAAVRHHPDRAALMARLGLDSNSVVLIINTEGDTDVTHYREVVWE GKHPACD" misc_feature 2061955..2063082 /locus_tag="B565_1848" /note="Threonine dehydratase [Amino acid transport and metabolism]; Region: IlvA; COG1171" /db_xref="CDD:31364" misc_feature 2062027..>2062554 /locus_tag="B565_1848" /note="Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD)...; Region: Trp-synth-beta_II; cd00640" /db_xref="CDD:107202" misc_feature 2062123..2062125 /locus_tag="B565_1848" /note="catalytic residue [active]" /db_xref="CDD:107202" gene 2063220..2064437 /locus_tag="B565_1849" /db_xref="GeneID:10487766" CDS 2063220..2064437 /locus_tag="B565_1849" /codon_start=1 /transl_table=11 /product="peptidase, M20/M25/M40 family" /protein_id="YP_004392501.1" /db_xref="GI:330829549" /db_xref="GeneID:10487766" /translation="MSKQIPFEMVLEKAYQYKAEMSQFLRDMIAIPSESCDEERVVLR IKQEMEKVGFDKVEIDPMGNVLGYIGHGPRLIAMDAHIDTVGVGNRANWTFDPYEGME DHEIIGGRGASDQEGGMASMVYAGKIIKDLGLEDQYTLLVTGTVQEEDCDGLCWQYII EQSKIRPEFVVSTEPTDCQIYRGQRGRMEIRVEVQGVSCHGSAPERGDNAIFKMGPIL GELQELSHNLGNDDFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWQGAL DEIRALPAVKAAGAEVSMYQYDRPAYTGLVYPTECYFPTWKVEEDHITVKTLSKAYRE LFRKEPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKEHLVKCAAMY AVIPMLYLAELDK" misc_feature 2063232..2064428 /locus_tag="B565_1849" /note="peptidase; Reviewed; Region: PRK13004" /db_xref="CDD:183836" misc_feature 2063286..2064416 /locus_tag="B565_1849" /note="M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases; Region: M20_ArgE_DapE_like4; cd05649" /db_xref="CDD:193526" misc_feature order(2063460..2063462,2063559..2063561,2063661..2063666, 2063739..2063741,2064339..2064341) /locus_tag="B565_1849" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:193526" misc_feature order(2063784..2063786,2063817..2063828,2063844..2063846, 2063850..2063855,2063862..2063867,2063871..2063876, 2063883..2063885,2063931..2063933,2063937..2063960, 2063979..2063984,2064006..2064008,2064012..2064014, 2064255..2064257) /locus_tag="B565_1849" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:193526" gene 2064517..2065971 /locus_tag="B565_1850" /db_xref="GeneID:10487767" CDS 2064517..2065971 /locus_tag="B565_1850" /codon_start=1 /transl_table=11 /product="dihydropyrimidinase" /protein_id="YP_004392502.1" /db_xref="GI:330829550" /db_xref="GeneID:10487767" /translation="MKAKAFEVVGMKRLIKNGVLVDPQGEYRQDLLIDNGVIRARAAD IQPDGETEVIDASGCYVMPGGIDVHTHFNIDVGIARSCDDFFSGTRAAACGGTTSIID HMGFGPAGCNLHHQLARYHDYAADQAVIDYSFHGVIQHVDDAILDEMAAMVQEEGISS FKLYLTYQYKLGDHDVLRALARLKEVGALATVHPENDAAIAARRAALLAAGHHEPWYH PQSRPLECEAEAIARMINLADLAGSAPLYIVHLSNGLGLEYLKLARRQGQPVWVETCP QYLLLDDACYYREDGVDFLLSPPLRGRSELDKLWVGIAAGDIDTVATDHCNFSHAQRM TLSGGDFSRCPNGLPGVENRMLLLFAHGVLGGRISPSRFVALTSANPARLFGLWPRKG NLQAGSDADLVIMNPRGDTLISHQQLHDNGDYSPYEGMRCPGQIRMTLSRGEIVARDG EFLGRRGHGRFLARAPFDPALAPELHSPCPAAAG" misc_feature 2064547..2065926 /locus_tag="B565_1850" /note="phenylhydantoinase; Validated; Region: PRK08323" /db_xref="CDD:181388" misc_feature 2064556..2065893 /locus_tag="B565_1850" /note="D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like...; Region: D-HYD; cd01314" /db_xref="CDD:30057" misc_feature order(2064586..2064591,2064595..2064597,2064634..2064639, 2065039..2065041,2065102..2065104,2065111..2065113, 2065120..2065122,2065189..2065191,2065201..2065203, 2065213..2065215,2065222..2065224,2065306..2065311, 2065315..2065320,2065663..2065665,2065678..2065680, 2065693..2065695) /locus_tag="B565_1850" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:30057" misc_feature order(2064721..2064723,2064727..2064729,2065000..2065002, 2065093..2065095,2065264..2065266,2065486..2065488) /locus_tag="B565_1850" /note="active site" /db_xref="CDD:30057" gene 2066067..2066999 /locus_tag="B565_1851" /db_xref="GeneID:10487768" CDS 2066067..2066999 /locus_tag="B565_1851" /codon_start=1 /transl_table=11 /product="carbamate kinase" /protein_id="YP_004392503.1" /db_xref="GI:330829551" /db_xref="GeneID:10487768" /translation="MKQRIVLALGGNALGNNLPEQMKAVQSTAGTIADLIAQGHEVVV THGNGPQVGMIQQAFEVAARHDPKAPHLPMSICVALSQGYIGYDLQNALREALLERGI HKPVATLVTQVEVDKNDPAFLDPSKPIGGFFSKEEAEALMAKGERLKEDAGRGYRRVV ASPKPVDIIEKETVSAMLAAGQVVITVGGGGIPVLREGNHLRGASAVIDKDWASAKLA ELIDADMLIILTAVEKVAINFGKPDVQWLDTLSVADANSFIAQGQFAKGSMLPKVEAA LSFATALPGRKSLITLLEKAAEGIAGKTGTVISL" misc_feature 2066067..2066996 /locus_tag="B565_1851" /note="carbamate kinase; Reviewed; Region: PRK12686" /db_xref="CDD:183683" misc_feature 2066121..2066993 /locus_tag="B565_1851" /note="AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP. Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an...; Region: AAK_CK; cd04235" /db_xref="CDD:58601" misc_feature order(2066205..2066213,2066445..2066447,2066691..2066699) /locus_tag="B565_1851" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:58601" misc_feature order(2066235..2066237,2066280..2066282,2066289..2066294, 2066301..2066303,2066313..2066318,2066325..2066327, 2066334..2066339,2066349..2066351,2066388..2066396, 2066400..2066402,2066574..2066576,2066583..2066585, 2066667..2066669,2066673..2066675) /locus_tag="B565_1851" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:58601" misc_feature order(2066754..2066759,2066772..2066774,2066781..2066783, 2066856..2066858,2066868..2066873,2066880..2066882) /locus_tag="B565_1851" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:58601" misc_feature order(2066754..2066759,2066772..2066774,2066781..2066783, 2066856..2066858,2066868..2066873,2066880..2066882) /locus_tag="B565_1851" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:58601" gene 2067243..2068148 /locus_tag="B565_1852" /db_xref="GeneID:10487769" CDS 2067243..2068148 /locus_tag="B565_1852" /codon_start=1 /transl_table=11 /product="inner membrane transport protein YijE" /protein_id="YP_004392504.1" /db_xref="GI:330829552" /db_xref="GeneID:10487769" /translation="MAALGGLVLLTAIWSYSWIVMKQVMLYAGAFEFTALRCLCGSLV LLLVLALRGRRYLKPTPFRYTLAIALFQTCGMVGLAQWALISGGAGKVAILSYTMPFW VVIFAALFLGERMRKLHYLAVGVAACGLLLVIQPWLLHLESLKSALLAILSGICWGIS AIIAKRMYARHPGVDLMSLTTWQMIYATLVMTLVAALVPERPIDWQPYVMGALAYSAI FATAIAWSLWLFVLKKLPAGIASLSTLAVPVTGVLLSWWLLGENPGPVEGSGIALIVL ALLVISRKGKRSVVSVAGETRIKHG" misc_feature 2067279..2067602 /locus_tag="B565_1852" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" misc_feature 2067705..2068052 /locus_tag="B565_1852" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene complement(2068219..2069811) /locus_tag="B565_1853" /db_xref="GeneID:10487770" CDS complement(2068219..2069811) /locus_tag="B565_1853" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase accessory factor subfamily" /protein_id="YP_004392505.1" /db_xref="GI:330829553" /db_xref="GeneID:10487770" /translation="MNLFAHAARLEQENTPFAMAQIIESRGSTPRHQAQMLVMADGQI LGTIGGGMIERLVIEEAMAAIAERKPRIFHGRMARNGEHAVGSDCGGAMSVYIDVYGL RPRLVLIGAGHVNRALAHAAAPLGFDIHVGDCFEGSLNPDHFPAGTHLKQADSISAVI EALAIEPANFVIIATNHQDKEALDRLITRPLAYLGLLASKRKVQTFTQALRQQGVSQE QLQRLHAPIGYNIGAETPEEIAISILAELLQVKNGKAGGLMQDDVRLKRDQLVVMRGS GDIATGVALRLHNAGFKVVMLDLDKPTVIRRTVAFAQGMFDGETSVEGVSAKRVESVE QAFEQLDRGIIPLLVDPDCATLAELKPRYLVDAILAKQNLGTHKEMAPITVALGPGFE AGRDCDAVIETNRGHHLGRVIYQGPAQPNTGIPGVIEGHSARRVVRAPVAGVMKSIIK LGDLVQEGDVIAHVGDAPIIAPLSGMVRGLLSDGIEVTVGFKIGDIDPRGERADATTV SDKARAIGGAVLEAMMHLAQRR" misc_feature complement(2069029..2069811) /locus_tag="B565_1853" /note="Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones]; Region: XdhC; COG1975" /db_xref="CDD:32158" misc_feature complement(2069590..2069766) /locus_tag="B565_1853" /note="XdhC and CoxI family; Region: XdhC_CoxI; pfam02625" /db_xref="CDD:190370" misc_feature complement(2068234..2069001) /locus_tag="B565_1853" /note="selenium-dependent molybdenum hydroxylase system protein, YqeB family; Region: matur_yqeB; TIGR03309" /db_xref="CDD:132352" gene complement(2069839..2070516) /locus_tag="B565_1854" /db_xref="GeneID:10487771" CDS complement(2069839..2070516) /locus_tag="B565_1854" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392506.1" /db_xref="GI:330829554" /db_xref="GeneID:10487771" /translation="MLITTTTRMFLPAPSHYRELIIETDPVRQLTRCQQLPDEPTLVA LFSHIDQASGKVAGPTPQQIDLIKGQQRFDLILVEADGANHKLLKVPALHEPCIPQSS DWVIALTGGAMVGAKADPQQIHRWAELQALCGIVAGDPLDWALFHQLLSHPEGLFKGT PARARRIWFINGDYQNEASWLDELIKLHSRHPEIYAIWQGAVREPQPIRHALGYFAHD GAQPPRP" misc_feature complement(2069944..2070513) /locus_tag="B565_1854" /note="probable selenium-dependent hydroxylase accessory protein YqeC; Region: TIGR03172" /db_xref="CDD:188292" gene 2070830..2071336 /locus_tag="B565_1855" /db_xref="GeneID:10487772" CDS 2070830..2071336 /locus_tag="B565_1855" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392507.1" /db_xref="GI:330829555" /db_xref="GeneID:10487772" /translation="MLDASLKNAQAFCQRVILVVGHRGEELQARYGSRPDIVVVYNPD YRQGLGSSIRCALAASDADYLFISHGDLPCIPREVYQQLWQARGCEALFPTWQGEAGH PVLLPKSLVRELAAAPVQSSVRRWLHGHQHRMVPVDSPAILFDVDTPERYQALLGGIL ENESEPTK" misc_feature 2070830..2071288 /locus_tag="B565_1855" /note="GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function; Region: GT_2_like_f; cd04182" /db_xref="CDD:133025" misc_feature order(2071040..2071042,2071262..2071264,2071268..2071270) /locus_tag="B565_1855" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:133025" gene 2071596..2074766 /locus_tag="B565_1856" /db_xref="GeneID:10487773" CDS 2071596..2074766 /locus_tag="B565_1856" /codon_start=1 /transl_table=11 /product="pyridine nucleotide-disulfide oxidoreductase domain-containing protein" /protein_id="YP_004392508.1" /db_xref="GI:330829556" /db_xref="GeneID:10487773" /translation="MRDTPFIHAANGQNSCKEIAMGDIMRPVPFKNLLTRIFAEYKES QSIFGIPAAQFYRKQDERKIKVFGETCETPIGPAAGPHTQLAQNIVTSWLTGGRFIEL KTVQIMDRLELEKPCIDAEDECFNTEWSTEFTLPKAFDEYLKAWFALYLLEEVFDPRL DGEAKSFIFNMSVGYNLDGIKQPPMQQFIHSLMDASQSPKFAEYQQVLRELVADGQFI AELGLGARRDRLQQLVDRIPANLVHGVTLSTMHGCPPNEIEAICRYMLEEKGLNTFVK LNPTLLGYPRVREILDTCGFDYIGLSEESFDHDLKLDQAKAMLTRLMALGAEKGLTFG VKLTNTLGTINRKGALPGDEMYMSGRALFPLSINVAAVLSRAFDGKLPISYSGGASKF NIAEIFETGIRPITMATDLLKPGGYLRQIECLKEIDTSDSWGMAQVDVTKLEALAAKA LTMDYTQKEWKSDDRIEVGGGLPLTDCYVAPCVTACAVHQDIPEYIRLMGEGEYVAAL ELIYQRNALPAITGHICDHQCQYNCTRLDYDSALNIRELKKVALERGWEGYKARWHKP AGSGDKHPVAVIGAGPAGLSAGYFLARAGHPVTVFEREADAGGVVKHIIPEFRIPAEL IQHDIDFVAAHGVKFEFGCDPALTVDKLHAQGFAYVFVGIGADKNGGMRLEGGHDRVY KSFNFLRSFNQGKPLPLGRHVAVIGAGNTAMDCARAALKVPGVSDVTVIYRRSEKEMP AYREEYLEAVEDGVRFCFLTNPERFDKDGKLTVRMMALGDPDEQGRRRPVPTEQTEVM QMDALITAIGEQPDCEVLKAMGIPLGSDGWPEVDGQTGETSRRNVFLIGDVQSGPSSI VGAIGGARRAADLVLSREHIASHQSEVTIQPSGKDEIYRRKGSIAVTMVDKNERDAFV AQEAHRCLECNYLCSKCVDVCPNRANVAIAVPGFKDQFQTLHLDAYCNECGNCAQFCP WQGKPYQDKVTIFSLPEDFDNSRNPGFYLADGGELRVRQDGETYRLTIDAQSRIKDAP AALGDMCRIISHVHAHHHYLLGAVEA" misc_feature 2071656..2074754 /locus_tag="B565_1856" /note="putative selenate reductase subunit YgfK; Provisional; Region: PRK09853" /db_xref="CDD:182113" misc_feature <2072520..2072759 /locus_tag="B565_1856" /note="TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate...; Region: TIM_phosphate_binding; cl09108" /db_xref="CDD:195791" misc_feature 2072754..2072759 /locus_tag="B565_1856" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:73384" misc_feature 2073318..>2073422 /locus_tag="B565_1856" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 2073699..2073935 /locus_tag="B565_1856" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" gene 2074797..2076125 /locus_tag="B565_1857" /db_xref="GeneID:10487774" CDS 2074797..2076125 /locus_tag="B565_1857" /codon_start=1 /transl_table=11 /product="amidohydrolase family protein SsnA" /protein_id="YP_004392509.1" /db_xref="GI:330829557" /db_xref="GeneID:10487774" /translation="MFILKNVTAVQLEPTRVLEGVDIAIEGSLIKAVGPNLRALYPEA NYREMGGKLVMPGIVCAHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEES LYYSGLICSLEAIKSGCSAVIDHHASPNFIKGSLNVLRKGFMEAGLRGMTCFETTDRN GGLAELQAGVEENILFAQQIDAAKAKGSEPYLVEAHIGAHAPFTVPDEGLAMLREAVQ VTGRGLHIHVAEDRYDMAHGHHHYGKEPIARLDEFGLIDSKTLIAHGIYLSPADIELL NSRDAFLVHNARSNMNNHVGYNMHLPEYRNLALGTDGIGSDMLEELKFAYFKHKDAGG ALWPDSFARFLWNGNTLLERNFGAKFGRLEPGYKADLTICDYDAPTPLAPRNLGGHLA FGMGSACVNSVMVEGRMVYQDREFPFDVAPIYEQASKVASRLWQRMDQLA" misc_feature 2074800..2076110 /locus_tag="B565_1857" /note="putative selenium metabolism protein SsnA; Region: Se_ssnA; TIGR03314" /db_xref="CDD:132357" misc_feature 2074803..2076047 /locus_tag="B565_1857" /note="TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are...; Region: ATZ_TRZ_like; cd01298" /db_xref="CDD:30041" misc_feature order(2074980..2074982,2074986..2074988,2075475..2075477, 2075484..2075486,2075586..2075588,2075730..2075732) /locus_tag="B565_1857" /note="active site" /db_xref="CDD:30041" misc_feature order(2075070..2075072,2075079..2075081,2075169..2075174, 2075256..2075261) /locus_tag="B565_1857" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:30041" gene 2076206..2076982 /locus_tag="B565_1858" /db_xref="GeneID:10487775" CDS 2076206..2076982 /locus_tag="B565_1858" /codon_start=1 /transl_table=11 /product="FAD binding domain in molybdopterin dehydrogenase protein" /protein_id="YP_004392510.1" /db_xref="GI:330829558" /db_xref="GeneID:10487775" /translation="MIEQFFRPEQLGQALELKASFGNDAVYMGGGSKLNAAPTRTDKK VAISLDKLGLDQIEQQHGQIHIGATVTLQTLKEDPRTPAALCDALGFVYSRHLRNQAT LGGELACQQQDSPLLPVLLVLEAVVVLENNLLQPIDAYLAGQRNALVLGIVLPEPELR CATRRISRNADGLAVMTAAVALDSIGEMRVAVAGVTPQPMRLRDLERRELHDAALEAA VSELIAPREDLAGSVSYKRYITGVVVADLLVDCQQQEVQA" misc_feature 2076209..2076979 /locus_tag="B565_1858" /note="probable selenate reductase, FAD-binding subunit; Region: Se_sel_red_FAD; TIGR03312" /db_xref="CDD:132355" misc_feature 2076686..2076958 /locus_tag="B565_1858" /note="CO dehydrogenase flavoprotein C-terminal domain; Region: CO_deh_flav_C; pfam03450" /db_xref="CDD:146206" gene 2076979..2079876 /locus_tag="B565_1859" /db_xref="GeneID:10487776" CDS 2076979..2079876 /locus_tag="B565_1859" /codon_start=1 /transl_table=11 /product="xanthine/hypoxanthine oxidase molybdopterin-binding/Fe-S-binding subunit" /protein_id="YP_004392511.1" /db_xref="GI:330829559" /db_xref="GeneID:10487776" /translation="MMELNFTLNGALRTVICKAGDNAQRVLFNQCRMHSVRNSDDGFG FAGSDAILFNGKVINASLLIAAQLDGAQVRTAESLGSWNQLSLVQQAMVDVGVVQSGY NDPAAALIVTDLLDRHPEPTRDQIDDALSGLFHRDGGYQQFYQAIELACSRMKDPDYL CQIAPEFRDDLRHIGKSCPKVDAAKMVQAKPCYVEDRVTEDALIIKMLRSPHPHAVIT KLDVSRAQALPGVVHVITYLNCPDVFYTPGGQSAPEPSPLDRRMFSRKVRHVGDRVAA VVAESEAIALAALKLIEVEYQVLPAVMTIDEAMAPNAPLVHDEPIVYMAGAPADLEQQ NACSVRRGDEHMIINFPIGSRPHENLAASVHGQIGDVAKGFAEADEIVERTYESTQAQ QCPTEPHICFTYMDGDRLVIHASTQVPWHVRRQVARIVGLKQHQVHVIKERVGGGFGS KQDILLEEVCAWATKVTGRPVTFRYTREEEFISNTSRHVAKVKVKVGAKKDGTITAID MDFRANTGPYGNHSLTVPSNGPALSLPLYPCDNVCFTVNTYYSNICPTGAYQGYGAPK GNFALTMAIAELAEKLGIDQLDMVEHNRVHEGDILKVLGAIGEGKMPTSVPHAASCAL EPILKQGREQIAWDSPKPADGDWRIGRGVAIIMQKSGIPDIDQANCMVKLESDGTFIV HSGGADIGTGLDTVVAKLTAEVLGCPLSDVHVISGDTDHALFDKGAYASSGTCFSGNA AKMAAENLKAKILFHGAAMLGEPVEDVELVHPGIVRGKQGEVSFAKLAHKAETGTGFG ILVGTASYITSELAFPYGANFAEVAVNVRTGEIRLDKFYALLDCGTPINPELALGQIY GATMRAIGHTMTEEICYDSKGIPLTRDLKSYGAPKIGDIPRDFRAFLVPSDDKVGPYG AKSISEIGVNGAAPAIATAIHDACGVWLRKWHFTPEQILRELGKLEQNVSA" misc_feature 2076982..2079855 /locus_tag="B565_1859" /note="putative hypoxanthine oxidase; Provisional; Region: PRK09800" /db_xref="CDD:182084" misc_feature 2077201..2077425 /locus_tag="B565_1859" /note="[2Fe-2S] binding domain; Region: Fer2_2; pfam01799" /db_xref="CDD:190116" misc_feature 2077540..>2077794 /locus_tag="B565_1859" /note="Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; Region: Ald_Xan_dh_C; pfam01315" /db_xref="CDD:144787" misc_feature 2078044..2079666 /locus_tag="B565_1859" /note="Molybdopterin-binding domain of aldehyde dehydrogenase; Region: Ald_Xan_dh_C2; pfam02738" /db_xref="CDD:145733" gene 2079969..2081495 /locus_tag="B565_1860" /db_xref="GeneID:10487777" CDS 2079969..2081495 /locus_tag="B565_1860" /codon_start=1 /transl_table=11 /product="xanthine/uracil permease family protein" /protein_id="YP_004392512.1" /db_xref="GI:330829560" /db_xref="GeneID:10487777" /translation="MMSKTTRKHSDLIYELEDKPPFYQTLMGAVTHLLAIFVPMVTPA LIVGGALGLSTEITAYLVSMAMIASGIGTWLQVNRYGPIGSGLLSIQSVNFSFVTVMI ALGGAMKKDGIHEELIVSTLLGVSFVGAFLVMGSSFVLPYLKRVITPTVSGVVVLMIG LSLIKVGIIDFGGGFSAMSSGTFGKYEHIGLGLLVLCVIVAFNCSRSPLLRMSGIAIG LMVGYAVALMLGMVDFSALENLPLITVPIPFKYGFSFDFHAFMLAGTIYLLSVLEAVG DITATAMVSHRDIQGPEFQKRLSGGVLADGLVSVIASALGSLPLTTFAQNNGVIQMTG VASRHVGKFIAVILVLLGLFPVVGRFFTTIPSPVMGGAMVIMFSMIAIAGGRIIISHG FDRRETLIVATSLGLGLGVSYDPNVFKVLPAGIYMLVENPICAGGITAIIMNLVLPQS RKRKAAVRDAEAVEVIQLSDKPDVIFTARSAGQPSASKGEGSPEPVPGEAVAPQVERI " misc_feature 2080038..2081213 /locus_tag="B565_1860" /note="Permease family; Region: Xan_ur_permease; pfam00860" /db_xref="CDD:189745" misc_feature 2080053..2081312 /locus_tag="B565_1860" /note="Sulfate transporter family; Region: Sulfate_transp; cl00967" /db_xref="CDD:193990" gene 2081548..2082864 /locus_tag="B565_1861" /db_xref="GeneID:10487778" CDS 2081548..2082864 /locus_tag="B565_1861" /codon_start=1 /transl_table=11 /product="Guanine deaminase" /protein_id="YP_004392513.1" /db_xref="GI:330829561" /db_xref="GeneID:10487778" /translation="MKNDNSVKAVRGSFFDITRVVDQPEEIESNARLIEDGLLIIRNG CIDWFGEWEEGKDRIPAEVRVRDYRGKMIVPGFVDTHIHYPQSEMVGAYGEQLLEWLN RHTFPAERRYNDLEYAREMSTFFIKQLLRNGTTTALVFGTVHPESVDALFEAASRINM RMIAGKVMMDRNAPDYLLDTAESSYVQSKQLIERWHGNGRLLYAITPRFAPTSTPEQL AMARRLREEFPTTYLHTHLCENKDEIAWVKSLFPAHKGYLDVYHQHGLTGHNCVFAHC VHLEEQEWDCLKETGSTIAFCPTSNLYLGSGLFKLHKAWRKQVKVGMGTDIGAGTTFN MLQTLNEAYKVMQLQGERLSAYQAFYLATLGGAHSLGLDEKIGSFAVGKEADFVVLDP VATPLQQLRYDNSTTLRDKLFVLLTLGDDRSIYRTYVDGQLVHERG" misc_feature 2081563..2082861 /locus_tag="B565_1861" /note="guanine deaminase; Provisional; Region: PRK09228" /db_xref="CDD:181711" misc_feature 2081575..2082840 /locus_tag="B565_1861" /note="Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and...; Region: GDEase; cd01303" /db_xref="CDD:30046" misc_feature order(2081788..2081790,2081794..2081796,2082253..2082255, 2082262..2082264,2082370..2082372,2082523..2082525) /locus_tag="B565_1861" /note="active site" /db_xref="CDD:30046" gene 2083154..2084563 /locus_tag="B565_1862" /db_xref="GeneID:10487779" CDS 2083154..2084563 /locus_tag="B565_1862" /codon_start=1 /transl_table=11 /product="xanthine/uracil permease" /protein_id="YP_004392514.1" /db_xref="GI:330829562" /db_xref="GeneID:10487779" /translation="MTQANSRTNSVEQLANDDASQSAAKQQPLTALDRYFMISERGSN VRQEVLAGLTTFLAMVYSVIVVPSMLGKAGFPPGAVFVATCLVAGFGSLLMGLWAKLP MAIGCAISLTAFTAFSLVLGQQIPIPVALGAVFLMGVLFTAISVTGVRSWILDNLPMG IAHGTGIGIGLFLLLIAANGVGLVIKNPLEGLPVALGAFTSMPVIMSLIGLAVIFGLE KLRVPGGILLVIIAISIFGLIFDPAVKYQGLFALPSLSDDQGKSLIFSLDIMGALSPL VLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGHIINSGKALSADSVSSIFSSLVGA APAAVYIESAAGTAAGGKTGLTATVVGGLFLLMLFLSPLSYLVPAYATAPALMYVGLL MLSNVTKLDFDDFVGAMSGLVCAVFIVLTCNIVTGIMLGFSSLVIGRICSKEWHKLNV GTVVIALALVLFYAGGWAI" misc_feature 2083235..2084554 /locus_tag="B565_1862" /note="Sulfate transporter family; Region: Sulfate_transp; cl00967" /db_xref="CDD:193990" misc_feature 2083289..2084443 /locus_tag="B565_1862" /note="Permease family; Region: Xan_ur_permease; pfam00860" /db_xref="CDD:189745" gene 2084954..2087272 /locus_tag="B565_1863" /db_xref="GeneID:10487780" CDS 2084954..2087272 /locus_tag="B565_1863" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase, molybdenum binding subunit" /protein_id="YP_004392515.1" /db_xref="GI:330829563" /db_xref="GeneID:10487780" /translation="MSIGLPLKRVDAEAKVTGSARYTDDNIMLGMRHAKYVRSNIAHG KVLAIDATEALALHGVEAVFTHEDVPTTCFRTAGHAWSLDEAKRDVKDRRLLTDHVRH FGDGVAIVVARDPLVAEKAAALVKVTYEPLPVMTDAQSALADGAYPIHPSGNLLRQSQ LRANDPEQAIASADLQFQAHYRTPVVQHCHLETVTCYAYMDQPDHIIVVSSTQIPQIV RSRVAKSLGLPWSSVRVIKPYMGGGFGNKQDVLEEPMAAFLSYKLGGVPVKVTLSREE CFFASRTRHGFAIDGKMGLNRDGTLKGYQLDVLSNTGGYASHGHSIASAGGNKISYLY PRSAFGYDAKTFYSNLPTAGAMRGYGAPQVIFALECMLDDACAELGLDPLDVRIANVA REGDVNQVNQKTIYSAGLPDCLIRGREMFEWDRLKTECLEQDPASRVRRGIGVACFSY GSNTYPVGVEIAGARMLLNQDGTVNLQIGATEIGQGSDTVFAQMAAQTLGIPFEQIRV ISTQDTDITAYDPGSFASRQSYVAAPAIHQAALQLRARILSLAAQLCHQDVGSLTLID GYVVLAGAPDKVLISVAEVSVNAYYHLTIGGQITSEVSHKTTTNPPSFGCTFVDLSVD IDLCKVTINRIINLHDAGKILNPQLAEGQVHGGMGMGIGWSLFEEMIIDAKSGVVRNP NLLDYKFPTMLDLPELECDFVQTYEPQSVYGHKSLGEPPIISPGPAIRNAIRMATGVA INELPITPKTLFREFVAAGLIGEGSGEEQHHV" misc_feature 2084954..2087236 /locus_tag="B565_1863" /note="xanthine dehydrogenase subunit XdhA; Provisional; Region: PRK09970" /db_xref="CDD:182174" misc_feature 2085002..2085352 /locus_tag="B565_1863" /note="Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; Region: Ald_Xan_dh_C; pfam01315" /db_xref="CDD:144787" misc_feature 2085374..2087041 /locus_tag="B565_1863" /note="Molybdopterin-binding domain of aldehyde dehydrogenase; Region: Ald_Xan_dh_C2; pfam02738" /db_xref="CDD:145733" gene 2087265..2088143 /locus_tag="B565_1864" /db_xref="GeneID:10487781" CDS 2087265..2088143 /locus_tag="B565_1864" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase, FAD binding subunit" /protein_id="YP_004392516.1" /db_xref="GI:330829564" /db_xref="GeneID:10487781" /translation="MFDIARYYKAHSVAEAVALRQADPEARLLAGGTDVMIQLHHLNA AYRHIVDIHDLPELKGVCELPDGSIRIGSGTTFTELIENELVQRRLPMLAEASATIAG PQIRNVATYGGNICNGATSADSAAPTVALEAELEIAGPNGTRRIPIAGFHTGPGKVAL QPAEILVAFHFAPDSHPHVGSHYFKYAMRGAMDIATIGCAAYCQIEDGHFKSLRLAYG VAAPTPVRTPHAEAAAEGQPLTRATLAAIAEAVVADVAPRSSWRAEKEFRLHLIKTLA QRVVACAVERAGGKIL" misc_feature 2087265..2088137 /locus_tag="B565_1864" /note="xanthine dehydrogenase subunit XdhB; Provisional; Region: PRK09971" /db_xref="CDD:182175" misc_feature 2087808..2088113 /locus_tag="B565_1864" /note="CO dehydrogenase flavoprotein C-terminal domain; Region: CO_deh_flav_C; pfam03450" /db_xref="CDD:146206" gene 2088140..2088625 /locus_tag="B565_1865" /db_xref="GeneID:10487782" CDS 2088140..2088625 /locus_tag="B565_1865" /codon_start=1 /transl_table=11 /product="carbon monoxide dehydrogenase small chain" /protein_id="YP_004392517.1" /db_xref="GI:330829565" /db_xref="GeneID:10487782" /translation="MMQPQTCPAVEIQCEINGKPYSYAVSPTMSLLHFLRGQGLISVK EGCSVGECGACTVRVNGTAIDSCLYLAVWADGKSIRTVEGERKGNELSDVQQAFIDEG AVQCGFCTPGLVMASAALLDKTERRPLTDAEIRRGLSGNLCRCTGYQNVVRAVKKCCK G" misc_feature 2088149..2088622 /locus_tag="B565_1865" /note="xanthine dehydrogenase subunit XdhC; Provisional; Region: PRK09908" /db_xref="CDD:182139" misc_feature 2088173..>2088337 /locus_tag="B565_1865" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature order(2088266..2088271,2088278..2088280,2088287..2088289, 2088293..2088304) /locus_tag="B565_1865" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature order(2088278..2088280,2088293..2088295,2088302..2088304) /locus_tag="B565_1865" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" misc_feature 2088380..2088610 /locus_tag="B565_1865" /note="[2Fe-2S] binding domain; Region: Fer2_2; pfam01799" /db_xref="CDD:190116" gene complement(2088714..2089439) /locus_tag="B565_1866" /db_xref="GeneID:10487783" CDS complement(2088714..2089439) /locus_tag="B565_1866" /codon_start=1 /transl_table=11 /product="IS3 family transposase B" /protein_id="YP_004392518.1" /db_xref="GI:330829566" /db_xref="GeneID:10487783" /translation="MVRFVRQVRLRQPRVGTRKLHYLLQGQEDGGLKVGRDRLFRILA EHRLLVQPKRAYHKTTHSFHRFYRHPNLLKAGPEQVTPVAPEQVWVADITYLPARSGP LYLSLVTDAYSRKIVGHHVHEGMHAKSVAMAFKKALKQRRGGGELIHHSDRGVQYCSG LYQSLHERYGVKCSMTDGYDCYQNALAERVNGILKGELLLQSPQDLAQAREMVREAVD IYNEERPHHALKYRTPDAVHRGF" misc_feature complement(2088717..2089427) /locus_tag="B565_1866" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: Tra5; COG2801" /db_xref="CDD:32633" misc_feature complement(2088846..2089199) /locus_tag="B565_1866" /note="Integrase core domain; Region: rve; cl01316" /db_xref="CDD:194099" gene complement(2089535..2089933) /locus_tag="B565_1867" /db_xref="GeneID:10487784" CDS complement(2089535..2089933) /locus_tag="B565_1867" /codon_start=1 /transl_table=11 /product="IS3 family transposase A" /protein_id="YP_004392519.1" /db_xref="GI:330829567" /db_xref="GeneID:10487784" /translation="MGQGVKRTQRDYSLTFKLALVEQIEKGELTYKQAQMRYGIQGRS TVLVWLRKHGRQDWSQGASVRAGRSITMPDPDNQTPEQRIKELEQQLALMSQKAQFFE AVVDVLKNDYGVSIVKKRPGKSSRSGKSRG" gene complement(2090065..2090628) /locus_tag="B565_1868" /db_xref="GeneID:10487785" CDS complement(2090065..2090628) /locus_tag="B565_1868" /codon_start=1 /transl_table=11 /product="Surface antigen" /protein_id="YP_004392520.1" /db_xref="GI:330829568" /db_xref="GeneID:10487785" /translation="MGMQENNKMNRSMMAGIGIGIASALALSAAASGSLFTPQPTFAE VIASKPITETIKTPRQECRNVTVTHRKPVQDEHKILGTVVGAALGGVVGHQFGGGSGK KVATAAGAVAGGYAGNQVQGNMQAGDTYTTTEQRCQTVQDTSVNTIGYDVTYRLAGQE GVIRMKQAPGATIPVKDGKLVIDQPKV" misc_feature complement(2090080..2090523) /locus_tag="B565_1868" /note="Glycine zipper 2TM domain; Region: Rick_17kDa_Anti; cl10470" /db_xref="CDD:195970" gene complement(2090765..2090965) /locus_tag="B565_1869" /db_xref="GeneID:10487786" CDS complement(2090765..2090965) /locus_tag="B565_1869" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392521.1" /db_xref="GI:330829569" /db_xref="GeneID:10487786" /translation="MGLEPFINHLRGHINEQSPCSRLPLTCPRQHFATLAFCSPPALQ IATRIAPYRTDRVHHTPEIGHF" gene 2091111..2091293 /locus_tag="B565_1870" /db_xref="GeneID:10487787" CDS 2091111..2091293 /locus_tag="B565_1870" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392522.1" /db_xref="GI:330829570" /db_xref="GeneID:10487787" /translation="MLPSWITPAIQANIITVQQAERLLSSLYRPLAEQGEELPADIVD ISLKLYCFRQQGRVRH" gene 2091528..2093150 /locus_tag="B565_1871" /db_xref="GeneID:10487788" CDS 2091528..2093150 /locus_tag="B565_1871" /codon_start=1 /transl_table=11 /product="AMP-binding protein" /protein_id="YP_004392523.1" /db_xref="GI:330829571" /db_xref="GeneID:10487788" /translation="MTVQNIYERDLAKTAANFEALTPISFLGRAERVYPDYPALIHGS LRQSWGETARRCRQLASALRLRGIGEGDTVSIVAPNIPAMFEAHFGVPMSGAVLNTIN TRLDAESMAFIFQHAQSKVVLVDREFGAVVRKALDLLESQPLVIAIDDPIYREGALVS DLDYEQFLAQGSGDEPGWLPQDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNVL SWELPKHPVYLWTLPMFHCNGWCFPWTLAATAGVSVCLRHVQAAAIYEALHEHRVSHF CAAPIVLNMLNNADPALKQGLDHPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTET YGPCVLCEPQRSWQGQDATALSRLKARQGVASPLQGEMRVINPVSGEPVAKDGKTMGE IVLRGNVVMKGYLKNPAASAEAMAEGWFRSGDLAVWHPDGYVEIKDRSKDIIISGGEN ISSLEVEDVLYRHPDVDEAAVIAMPDEKWGEVPCAFVKLKEGRETTQAELIAFCREQM AHFKAPKRIIFTPLPKTSTGKVQKFVLRKQLG" misc_feature 2091537..2093141 /locus_tag="B565_1871" /note="acyl-CoA synthetase; Validated; Region: PRK08162" /db_xref="CDD:181261" misc_feature 2091600..2093144 /locus_tag="B565_1871" /note="Acyl-protein synthetase, LuxE; Region: LuxE; cl10450" /db_xref="CDD:186997" gene complement(2093236..2094525) /locus_tag="B565_1872" /db_xref="GeneID:10487789" CDS complement(2093236..2094525) /locus_tag="B565_1872" /codon_start=1 /transl_table=11 /product="PAS/PAC sensor-containing diguanylate cyclase" /protein_id="YP_004392524.1" /db_xref="GI:330829572" /db_xref="GeneID:10487789" /translation="MKDEPFSIQLQHELDHLKAIFNETDAYMFTKDLAGRYTYANQAV LDLFGCTLAELQGQDDRAFFDLEFSDTIQRNDRLVLEQQLAIAQEEINYLKSTGEKRC YWTVKKPIHDKDGNLIGLCGISTDITEHKLIEARMAEQHQLLEIILANVDAHIYMKDS LHRFLYVNQKVADLLGLPAEQIINRRDDEVIPAASACQLWRLDNRVFETGELQAGEEM LTDPEGNQHYYWSVKVPFLLGDGTPTLIGISSDITELHQLKEQLHQQSVRDGLTGLYN RRFFFEMCEKNLSLDMRHHLTSVLMVLDVDQFKCINDRFGHPLGDSALVHLGRVMQSV LRSEDVLARIGGDEFAILLPNTTLSAAASLAERLRLQVMQSPLPLPDGDKLVITISAG LVENGEGELMESLYARADQMLYQAKQSGRNCVACKAP" misc_feature complement(2094283..2094483) /locus_tag="B565_1872" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature complement(2094139..2094465) /locus_tag="B565_1872" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:117025" misc_feature complement(2093767..2094084) /locus_tag="B565_1872" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:117025" misc_feature complement(2093251..2093724) /locus_tag="B565_1872" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(2093485..2093487,2093614..2093616)) /locus_tag="B565_1872" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(2093482..2093493,2093497..2093499, 2093563..2093565,2093575..2093577,2093587..2093592, 2093599..2093601)) /locus_tag="B565_1872" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(2093425..2093427,2093509..2093511)) /locus_tag="B565_1872" /note="I-site; other site" /db_xref="CDD:143635" gene 2094889..2096376 /locus_tag="B565_1873" /db_xref="GeneID:10487790" CDS 2094889..2096376 /locus_tag="B565_1873" /codon_start=1 /transl_table=11 /product="KAP family P-loop domain-containing protein" /protein_id="YP_004392525.1" /db_xref="GI:330829573" /db_xref="GeneID:10487790" /translation="MAVAPFNWDDAVQWDGPGAIAGGEELAGDRLERARYAEFLTNYL AAEGKQRNYVLNLNAEWGAGKTWFIKRWYMELKAHYPTVYIDAWQQDFSDDPLLTVIS SIIDQLKDATGNKVAIPDGVKSKLLGLLKVGGKLVLKSAIKKAGLEDGDFSMEGEDVD KLVDTLCSNHKERYESIQYLKQEIRQWVEGAVGLSEGELDYPAFILIDELDRCRPSYA VEMLETIKHIFDIPKVVFVLATDTEQLQHAVKVIYGADFNAHTYLSRFFSRRFSLLAG SKRLFIESNLSNSVLVDHSFDKVWPKGLNIEAITTVLSSISDACHLSLRSIEKLIDRM VLVLLNLEKDDVNVVFLAYMLALHEIKPSDYELIITMARSRQKLENIKIGNVNFRALN EMQGSINISMKTNYCVDFIMGSYSVEIKSLVKNYLLSYLGEHDNASSTLIDQNKNLIQ KYPRITGEEHSEKLKCYILNTELYEKSRLDMSVYRNWVELAMSFD" misc_feature 2094985..2095881 /locus_tag="B565_1873" /note="KAP family P-loop domain; Region: KAP_NTPase; pfam07693" /db_xref="CDD:148992" misc_feature <2095501..>2095623 /locus_tag="B565_1873" /note="Predicted P-loop ATPase [General function prediction only]; Region: COG4928" /db_xref="CDD:34537" gene complement(2096416..2097066) /locus_tag="B565_1874" /db_xref="GeneID:10487791" CDS complement(2096416..2097066) /locus_tag="B565_1874" /codon_start=1 /transl_table=11 /product="bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein" /protein_id="YP_004392526.1" /db_xref="GI:330829574" /db_xref="GeneID:10487791" /translation="MNNFSENAQTTASARPLAEQLDWEKCDGMIPAIVQHAASSEVLM QGFMTREALEKTQTTGQVTFFSRSKQRLWTKGESSGNVLQLVAISTDCDQDSLLIAAN PVGPTCHKGTTSCFHGHPVPPLGFLAELEQVLAARKGADPATSYTASLYGKGTKRIAQ KVGEEGVEVALAAMAKDREELINESADLLYHLTVLLQNEGLGLQDVVQRLYERHNK" misc_feature complement(2096425..2097018) /locus_tag="B565_1874" /note="bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; Reviewed; Region: PRK02759" /db_xref="CDD:179470" misc_feature complement(2096716..2097018) /locus_tag="B565_1874" /note="Phosphoribosyl-AMP cyclohydrolase; Region: PRA-CH; cl00344" /db_xref="CDD:193779" misc_feature complement(2096437..2096688) /locus_tag="B565_1874" /note="MazG nucleotide pyrophosphohydrolase domain; Region: MazG; cl00345" /db_xref="CDD:193780" gene complement(2097059..2097832) /locus_tag="B565_1875" /db_xref="GeneID:10487792" CDS complement(2097059..2097832) /locus_tag="B565_1875" /codon_start=1 /transl_table=11 /product="Imidazole glycerol phosphate synthase subunit hisF" /protein_id="YP_004392527.1" /db_xref="GI:330829575" /db_xref="GeneID:10487792" /translation="MLARRIIPCLDVKDGVVVKGVQFRNHEVMGGIVELARRYAEEGA DELVFYDITASSDARVVDKSWVSRVAEVIDIPFCVAGGIKSVEDARQILEFGADKISI NSPALADPTLISRLAERFGVQCVVVGIDSYFDAETGHYQVKQFTGDESRTRTTAWHTL DWVQEVQKRGAGEIVLNVMNQDGMRQGYDLDQLKLVRSVCKVPLIASGGAGAMAHFRD AFTLADVDGALAASVFHKGLIPIPELKRWLKTEGVAIRE" misc_feature complement(2097065..2097832) /locus_tag="B565_1875" /note="Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]; Region: HisF; COG0107" /db_xref="CDD:30456" misc_feature complement(2097080..2097823) /locus_tag="B565_1875" /note="The cyclase subunit of imidazoleglycerol phosphate synthase (HisF). Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-; Region: HisF; cd04731" /db_xref="CDD:73393" misc_feature complement(order(2097137..2097142,2097206..2097214, 2097284..2097289,2097302..2097304,2097383..2097385, 2097443..2097445,2097449..2097451,2097521..2097526, 2097587..2097589,2097683..2097685,2097776..2097778)) /locus_tag="B565_1875" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73393" misc_feature complement(order(2097155..2097157,2097230..2097232, 2097314..2097316,2097464..2097466,2097536..2097541, 2097548..2097550,2097605..2097607,2097611..2097613, 2097620..2097622,2097632..2097634,2097698..2097700, 2097713..2097715)) /locus_tag="B565_1875" /note="glutamase interaction surface [polypeptide binding]; other site" /db_xref="CDD:73393" gene complement(2097832..2098593) /locus_tag="B565_1876" /db_xref="GeneID:10487793" CDS complement(2097832..2098593) /locus_tag="B565_1876" /codon_start=1 /transl_table=11 /product="isomerase" /protein_id="YP_004392528.1" /db_xref="GI:330829576" /db_xref="GeneID:10487793" /translation="MIIPAIDLINGQVVRLYQGDYEQKTEYSSSPQARFDEYVSQGAV QLHLVDLDGAKDAKARQLPLLTQLLSATEAPVQVGGGVRTEQDVADLLAAGASRVVIG STAVKSPDLVASWMEKYGPEQIVLALDVNIDEQGNRHIAVAGWQENSGVTIEALIERF LPAGLKHVLCTDISRDGTLAGTNVELYRDLCARYPSVAFQASGGIGGIEDIEALKGSG VKGIILGRALLEGKFSVGDAIACWQAPAAVTTGGN" misc_feature complement(2097865..2098593) /locus_tag="B565_1876" /note="Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]; Region: HisA; COG0106" /db_xref="CDD:30455" misc_feature complement(2097874..2098593) /locus_tag="B565_1876" /note="HisA. Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-...; Region: HisA; cd04732" /db_xref="CDD:73394" misc_feature complement(order(2098207..2098209,2098453..2098455, 2098573..2098575)) /locus_tag="B565_1876" /note="catalytic residues [active]" /db_xref="CDD:73394" gene complement(2098599..2099243) /locus_tag="B565_1877" /db_xref="GeneID:10487794" CDS complement(2098599..2099243) /locus_tag="B565_1877" /codon_start=1 /transl_table=11 /product="Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit" /protein_id="YP_004392529.1" /db_xref="GI:330829577" /db_xref="GeneID:10487794" /translation="MDVSKQKLVIIDTGCANLASVRMAFERLGVQPLVSSQAADIEQA DKLILPGVGTAVAAMNNLNERGLVPLIRAAKQPLLGFCLGMQMLAEASEESMGTDDSS ERLIDCLGIVPGKIRLMEVGTLHQSSMRLPHMGWNQIEHDETHPLLKGIPSGSYFYFV HSYALEVTEATLATCDYGQPFTAIVGRDNFFGAQFHPERSGAAGARLLQNFLEL" misc_feature complement(2098602..2099228) /locus_tag="B565_1877" /note="imidazole glycerol phosphate synthase subunit HisH; Provisional; Region: hisH; PRK13170" /db_xref="CDD:183877" misc_feature complement(2098608..2099219) /locus_tag="B565_1877" /note="Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS); Region: GATase1_IGP_Synthase; cd01748" /db_xref="CDD:153219" misc_feature complement(order(2098650..2098652,2098656..2098658, 2098992..2099006,2099085..2099108)) /locus_tag="B565_1877" /note="putative active site [active]" /db_xref="CDD:153219" misc_feature complement(2099085..2099108) /locus_tag="B565_1877" /note="oxyanion strand; other site" /db_xref="CDD:153219" misc_feature complement(order(2098650..2098652,2098656..2098658, 2098998..2099000)) /locus_tag="B565_1877" /note="catalytic triad [active]" /db_xref="CDD:153219" gene complement(2099243..2100367) /locus_tag="B565_1878" /db_xref="GeneID:10487795" CDS complement(2099243..2100367) /locus_tag="B565_1878" /codon_start=1 /transl_table=11 /product="histidine biosynthesis bifunctional protein HisB" /protein_id="YP_004392530.1" /db_xref="GI:330829578" /db_xref="GeneID:10487795" /translation="MKTPFLFIDRDGTLIEEPVTDKQVDSLAKLRFEPMVIPVLRELQ AAGYVQVMVTNQDGLGTASLPLENFQPPHDLMMHLFESQGVKWEQVLICPHFPTDGCS CRKPHLGLVKEYLASGRIDFANSFVIGDRQTDLQLAENMGIGGIRYHPQDHNWLAIRD QLLSKGRVASVERYTKETRIQVAVDLDPSATNKCGGNQIATGIGFFDHMLDQIATHAG FQLKLNVSGDLYIDDHHTVEDVGLALGQALRQALGNKRGIGRFGFVLAMDEVQAVIDA RPLTEQEVSTALDLSGRPYFVFDCPSGFGRDNVGEMATEMVPHFFRSLSDAMAITLQM KVGSGNTHHQVEALFKGFGRALRQAIRVEGSELPSSKGVL" misc_feature complement(2099246..2100364) /locus_tag="B565_1878" /note="imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional; Region: PRK05446" /db_xref="CDD:180088" misc_feature complement(2099930..2100352) /locus_tag="B565_1878" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature complement(order(2100203..2100208,2100335..2100343)) /locus_tag="B565_1878" /note="active site" /db_xref="CDD:119389" misc_feature complement(2100326..2100343) /locus_tag="B565_1878" /note="motif I; other site" /db_xref="CDD:119389" misc_feature complement(2100206..2100208) /locus_tag="B565_1878" /note="motif II; other site" /db_xref="CDD:119389" misc_feature complement(2099246..2099863) /locus_tag="B565_1878" /note="Imidazoleglycerol-phosphate dehydratase; Region: IGPD; cd07914" /db_xref="CDD:153419" misc_feature complement(order(2099330..2099332,2099339..2099344, 2099411..2099413,2099489..2099491,2099564..2099569, 2099588..2099590,2099654..2099656,2099663..2099668, 2099720..2099725,2099732..2099734,2099744..2099746, 2099837..2099839)) /locus_tag="B565_1878" /note="putative active site pocket [active]" /db_xref="CDD:153419" misc_feature complement(order(2099339..2099350,2099411..2099416, 2099423..2099425,2099429..2099431,2099438..2099452, 2099663..2099668,2099672..2099680,2099744..2099746, 2099753..2099758)) /locus_tag="B565_1878" /note="4-fold oligomerization interface [polypeptide binding]; other site" /db_xref="CDD:153419" misc_feature complement(order(2099330..2099332,2099339..2099344, 2099411..2099413,2099654..2099656,2099663..2099668, 2099744..2099746)) /locus_tag="B565_1878" /note="metal binding residues [ion binding]; metal-binding site" /db_xref="CDD:153419" misc_feature complement(order(2099279..2099281,2099297..2099299, 2099306..2099308,2099357..2099359,2099363..2099365, 2099369..2099371,2099375..2099377,2099483..2099485, 2099489..2099491,2099501..2099509,2099555..2099560, 2099564..2099569,2099573..2099581,2099585..2099587, 2099591..2099593)) /locus_tag="B565_1878" /note="3-fold/trimer interface [polypeptide binding]; other site" /db_xref="CDD:153419" gene complement(2100383..2101453) /locus_tag="B565_1879" /db_xref="GeneID:10487796" CDS complement(2100383..2101453) /locus_tag="B565_1879" /codon_start=1 /transl_table=11 /product="histidinol-phosphate aminotransferase" /protein_id="YP_004392531.1" /db_xref="GI:330829579" /db_xref="GeneID:10487796" /translation="MSIANLARRVVRALTPYQSARRIGGKGHVWLNANEAPQAYPFTI EGSRLNRYPECQPAEVVNGYAAYAGVNPDQVLVSRGADEAIELLIRTFCEAGEDQILI CPPTYGMYAISAETCGVGIVEQPLTTSRQPDWPAIADRLSDVKLVFLCSPNNPTGDLV GRDGLIALLEKARDRAIVVVDEAYIEFCPEASVVDLLARFPNLVVTRTLSKAFALAGI RCGFTLASPEVIAMLAKVIAPYPIPEPIAQIAAQALSPMGLELMRERVMELNKQKAAF KAELTTLACVKEVFEDKGNFVLVRFVDGATVFAAMKAAGIILRDFSSKPGLDNSIRVT IGYQGEMDAVLAVLRDLPSPTL" misc_feature complement(2100407..2101432) /locus_tag="B565_1879" /note="histidinol-phosphate aminotransferase; Region: hisC; TIGR01141" /db_xref="CDD:162223" misc_feature complement(2100404..2101369) /locus_tag="B565_1879" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature complement(order(2100797..2100799,2100821..2100826, 2100830..2100832,2100902..2100904,2100992..2100994, 2101133..2101135,2101208..2101216)) /locus_tag="B565_1879" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(2100698..2100700,2100707..2100709, 2100797..2100805,2100923..2100925,2101103..2101105, 2101205..2101207)) /locus_tag="B565_1879" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(2100821..2100823) /locus_tag="B565_1879" /note="catalytic residue [active]" /db_xref="CDD:99734" gene complement(2101450..2102775) /locus_tag="B565_1880" /db_xref="GeneID:10487797" CDS complement(2101450..2102775) /locus_tag="B565_1880" /codon_start=1 /transl_table=11 /product="histidinol dehydrogenase" /protein_id="YP_004392532.1" /db_xref="GI:330829580" /db_xref="GeneID:10487797" /translation="MQTLIWKTLSPAQQADVLTRPALSDEADIGAVVRDIIAAVRSRG DEALRELSQRFERAPREQLRVSEAEIEAACARLDDGIKSAIEAAIANIRTFHAAQVQQ VVRVETQPGVVCELRTQPISRVGLYVPGGSAPLPSTVMMLAIPARLAGCREVVLCTPS PASDEILFAARACGVEKVFAIGGAQAIAAMAYGTESIPKVDKIFGPGNAYVTEAKGQV SRDWRGAAIDMPAGPSEVLVIADESANPAFVAADLLSQAEHGPDSQVVLVTTSPLLAD AIAGEIKSQLAKLSRRDIAAQALGSSLVILCDDLAEACAISNAYAPEHLIVQTRAPRD LLDLLENAGSIFLGAWTPESVGDYASGTNHTLPTYGYARTCSSLGLADYQRRYTVQEL SAEGIRGLGPIVERIAQAEGLDGHKNAVTLRLNALATAPQPTAQQKDLS" misc_feature complement(2101495..2102760) /locus_tag="B565_1880" /note="Histidinol dehydrogenase [Amino acid transport and metabolism]; Region: HisD; COG0141" /db_xref="CDD:30490" misc_feature complement(2101528..2102685) /locus_tag="B565_1880" /note="E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-...; Region: Histidinol_dh; cd06572" /db_xref="CDD:119329" misc_feature complement(order(2101999..2102001,2102143..2102148, 2102152..2102160,2102221..2102223,2102227..2102232, 2102299..2102301,2102362..2102364,2102386..2102391, 2102395..2102397,2102611..2102613)) /locus_tag="B565_1880" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:119329" misc_feature complement(order(2101528..2101548,2101552..2101557, 2101600..2101623,2101630..2101635,2101639..2101653, 2101657..2101662,2101690..2101692,2101696..2101698, 2101702..2101716,2101720..2101725,2101729..2101731, 2101735..2101761,2101765..2101770,2101777..2101779, 2101792..2101794,2101999..2102004,2102008..2102016, 2102020..2102025,2102032..2102037,2102116..2102118, 2102128..2102130,2102173..2102175,2102365..2102379, 2102413..2102415,2102419..2102421,2102428..2102442, 2102452..2102454,2102458..2102460,2102479..2102484, 2102491..2102496,2102503..2102508,2102515..2102517, 2102521..2102526,2102533..2102538)) /locus_tag="B565_1880" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:119329" misc_feature complement(order(2101528..2101530,2101537..2101539, 2101543..2101545,2101684..2101686,2101702..2101707, 2101717..2101719,2101804..2101809,2101999..2102001, 2102074..2102076,2102365..2102367,2102371..2102373)) /locus_tag="B565_1880" /note="product binding site; other site" /db_xref="CDD:119329" misc_feature complement(order(2101528..2101530,2101537..2101539, 2101543..2101545,2101684..2101686,2101702..2101707, 2101717..2101719,2101804..2101809,2101999..2102001, 2102008..2102010,2102074..2102076,2102365..2102367)) /locus_tag="B565_1880" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119329" misc_feature complement(order(2101528..2101530,2101705..2101707, 2101999..2102001,2102008..2102010)) /locus_tag="B565_1880" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:119329" misc_feature complement(2101804..2101809) /locus_tag="B565_1880" /note="catalytic residues [active]" /db_xref="CDD:119329" gene complement(2102788..2103684) /locus_tag="B565_1881" /db_xref="GeneID:10487798" CDS complement(2102788..2103684) /locus_tag="B565_1881" /codon_start=1 /transl_table=11 /product="ATP phosphoribosyltransferase" /protein_id="YP_004392533.1" /db_xref="GI:330829581" /db_xref="GeneID:10487798" /translation="METQRLRIAMQKSGRLSQDSQALFKSCGLKINLREQRLIAHVEN MPIDILRVRDDDIPGLVMEGVVDLGIIGENVLEEVQLIRASQGLPFEVKTLKQLDFGG CRLSLAVPEDVTYTGPQSLAGKRIATSYPGLLKRFFDEKGLGFKSVMLGGSVEVAPRA GLADAICDLVSTGATLEANGLKEVEVIYRSKAVLVQAPNPLSDAKQKLIDKLLPRIQG MQQARESKYIMLHAPKDKLDAITDLLPGAERPTIMQLAGDTNQVALHVVSSETLFWET MEQLKALGASSILVLPIEKMME" misc_feature complement(2102791..2103681) /locus_tag="B565_1881" /note="ATP phosphoribosyltransferase; Reviewed; Region: hisG; PRK00489" /db_xref="CDD:179047" misc_feature complement(2103097..2103669) /locus_tag="B565_1881" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature complement(2102794..2103096) /locus_tag="B565_1881" /note="HisG, C-terminal domain; Region: HisG_C; cl06867" /db_xref="CDD:157475" gene 2104027..2104272 /locus_tag="B565_1882" /db_xref="GeneID:10487799" CDS 2104027..2104272 /locus_tag="B565_1882" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392534.1" /db_xref="GI:330829582" /db_xref="GeneID:10487799" /translation="MPSQDLLFPILPRAPAAPGSEEIKREVNQISKKHQLRKTSTDNS DSQQRQQAYSTPAKRDQPKAEEDDHKPDPEHQIDLFV" gene 2104340..2106259 /locus_tag="B565_1883" /db_xref="GeneID:10487800" CDS 2104340..2106259 /locus_tag="B565_1883" /codon_start=1 /transl_table=11 /product="ATP-dependent helicase, DinG family" /protein_id="YP_004392535.1" /db_xref="GI:330829583" /db_xref="GeneID:10487800" /translation="MTIQTLFKPDGPLASHIDGFKARAPQLEMAEAVARAIKSGGRLL VEAGTGTGKTYAYLVPALESGKRVVISTGSKNLQEQLFYRDLPTITGALSYTPPVALL KGRSNYLCIERMNRLLSESHLQKPEILNDLVKVKSWSTATDNGDVGDIPGLQENAEIL AHVTSTNDNCLGRDCPYYDDCHLVVARRRAMDAQVVVINHHLFFADMAVKDTGFGELV PEAQVYVFDEAHQLPEIATNYFGKSVGSRTIQDLAQDIQLAYRAEAHDMAQLGKAADR LAIASQDLRLAFGVDGGRGNTRDMLRQPLWGQALARLNDAIGLCYEVLKLALGRGEQL DHAFERISELRTRLGEVLAVNQTGFSYWYDCSRLHFTLNLTPLSVAERFSAEVQRPEV AWVFTSATLTVDMRFDHFKAELGLAGSAELILDSPFDYGEQARLCVPRYLPEPNAFGR GELLANLMIPLINKTPGGCFFLCTSHQVMRQVAEVLRREIGRTVLLQGEDNKQRLLKE FVENGRAVLVATSSFWEGIDVRGAALSCVIIDKLPFASPDDPLLKARVDDCKLKGGDP FAELQLPKAVIALKQGVGRLIRDRSDHGVLVICDPRMVNKPYGATFIKSLPAIPRTRE LGTLGSFFDRTERGE" misc_feature 2104358..2106214 /locus_tag="B565_1883" /note="Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]; Region: DinG; COG1199" /db_xref="CDD:31392" misc_feature 2104397..2105086 /locus_tag="B565_1883" /note="DEAD_2; Region: DEAD_2; cl14887" /db_xref="CDD:196848" misc_feature 2105765..2106151 /locus_tag="B565_1883" /note="CRISPR/Cas system-associated DinG family helicase Csf4; Region: Csf4_U; cl09250" /db_xref="CDD:187934" gene 2106350..2107051 /locus_tag="B565_1884" /db_xref="GeneID:10487801" CDS 2106350..2107051 /locus_tag="B565_1884" /codon_start=1 /transl_table=11 /product="glycoprotease family protein" /protein_id="YP_004392536.1" /db_xref="GI:330829584" /db_xref="GeneID:10487801" /translation="MNELKILAVDTATEACSAALLVGDKLFSRWEEAPRDHTRKILPM VQAVLEDAGISLSDLDAIAFGRGPGSFTGVRIGISVAQGLAFGAGVPLIGISTLAAMA QGAYRLDGAQQVLTAIDARMNEVYFGRYELIDGRMQLVGDEVVSEPAALVDVRGKLAG PVTCVGTGFETYGETLSGLADELAESQVRFPAAEDMLPLARAAWLAGETVPVEQATPV YLRDKVTWKKLPGRE" misc_feature 2106365..2107012 /locus_tag="B565_1884" /note="Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]; Region: COG1214; cl14000" /db_xref="CDD:189252" gene 2107146..2107685 /locus_tag="B565_1885" /db_xref="GeneID:10487802" CDS 2107146..2107685 /locus_tag="B565_1885" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein, Slp family" /protein_id="YP_004392537.1" /db_xref="GI:330829585" /db_xref="GeneID:10487802" /translation="MMRNSRSDMMKRGMVVGALALLLGACSSVPKELAYEPENQLVAY QPALGGMEGKPARWSGVISAVHNKADQSVIEVVYLPLKSNGVPEQTEQSPGRFLAIMK GFVDPTLYAKGRSLTVLGTIGKPVDSQIGEHKYRFSVLNVTGSKLWPPVKEVEVRYMD PYFYDPFYDPFWPRRPLRR" misc_feature 2107221..2107619 /locus_tag="B565_1885" /note="Outer membrane lipoprotein Slp family; Region: Slp; cl01164" /db_xref="CDD:163955" gene 2107694..2108572 /locus_tag="B565_1886" /db_xref="GeneID:10487803" CDS 2107694..2108572 /locus_tag="B565_1886" /codon_start=1 /transl_table=11 /product="alpha/beta fold family hydrolase" /protein_id="YP_004392538.1" /db_xref="GI:330829586" /db_xref="GeneID:10487803" /translation="MIKSIKSTLHERLLTLADGRRVALLENHSAEHDQQGKPLLIALH GWLDNSASFLPLAQHLGDFHLICVDLPGHGHSDHKTTPYVFVDWLDDLYQIVQAAGWS RFTLLGHSLGALIASAYAGVFPEQVERLIMLEGLGPLSQPDEEVPAQLRRAILNRSRT RERSANGFASIDEAVAARCKVADITPQAARLICERQLEERAGRWHWRSDPRLRDLSPL RMSEGQARALMAAIRCPVLLIQGEQGFAALEAQWQARQDAFQQIERVILGGNHHFHME NSVDTAVCIVKFCQVR" misc_feature 2107778..>2108110 /locus_tag="B565_1886" /note="Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is 'interfacial activation', the process of becoming...; Region: Lipase; cl14883" /db_xref="CDD:196844" misc_feature 2107811..2108539 /locus_tag="B565_1886" /note="Alpha/beta hydrolase family; Region: Abhydrolase_6; pfam12697" /db_xref="CDD:193173" misc_feature 2108015..2108029 /locus_tag="B565_1886" /note="nucleophilic elbow; other site" /db_xref="CDD:29806" misc_feature 2108021..2108023 /locus_tag="B565_1886" /note="catalytic triad; other site" /db_xref="CDD:29806" gene 2108756..2110447 /locus_tag="B565_1887" /db_xref="GeneID:10487804" CDS 2108756..2110447 /locus_tag="B565_1887" /codon_start=1 /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_004392539.1" /db_xref="GI:330829587" /db_xref="GeneID:10487804" /translation="MQEKFVEKVWLKRYPEGVPAEINPDQYSSLVEMFESSVTQFADQ PAFVNMGQTITYRRLEEQSRAFAAYLQNELKLEKGDRVAVMMPNLLQYPIAVFGILRA GMIVVNVNPLYTPRELEHQLKDSGAKAIVIVSNFAHTLEKVVYDTPIKHVILTRMGDN LGLAKGTLVNFVVKYVKKLVPKYNLPHATTMRQALSKGRFLQYIKPEITNDDLAFLQY TGGTTGLSKGAMLTHRNMIANVEQCLGVYGPMLERGKEFVVTALPLYHVFALTVNCLL FMRIGGYNLLISNPRDIPGFVKEIKKYPFTCITGVNTLFNALVNNEEFQGIAFDKLKL TIGGGMAVQRAVAEKWKTLTDTPLLEGYGLTECSPLVSVCPYDLTDYNGSIGLPVCST EIRLVDDNGQVIHALGTPGEMQVRGPQVMVGYWQRPEATAEVMQDGWLCTGDIAVCDE QGFFKIVDRKKDMILVSGFNVYPNEIEDVVALHPKVLEVAAVGVPHKVSGELVKIFVV KKDAKLQEDEIIAHCRKHLTAYKVPKLVEFRDELPKTNVGKILRRVLRDEEIAKQ" misc_feature 2108774..2110441 /locus_tag="B565_1887" /note="long-chain-fatty-acid--CoA ligase; Validated; Region: PRK08974" /db_xref="CDD:181600" misc_feature 2108918..2110429 /locus_tag="B565_1887" /note="Acyl-protein synthetase, LuxE; Region: LuxE; cl10450" /db_xref="CDD:186997" gene 2110556..2111668 /locus_tag="B565_1888" /db_xref="GeneID:10487805" CDS 2110556..2111668 /locus_tag="B565_1888" /codon_start=1 /transl_table=11 /product="ribonuclease D" /protein_id="YP_004392540.1" /db_xref="GI:330829588" /db_xref="GeneID:10487805" /translation="MHYQLITQQDELEQYLASLADVPLAIDTEFVRTRTYYPQLGLFQ IYDGEHLALLDPLTLDLSALWQRLGRAGQIAILHASGEDLELIQHQAGHLPNQMHDTQ LATAFLGYGVSVGFGALVNEFLGVELEKDQARTDWLARPLTPRQLEYAAADVFYLMPL YEKVMAKLRESGKFAWFEQECQNHSARKTQGSDPRQAYLEIVNAWQLGRRELAILREL AAWRQQEAVRRDLALNFVVKELHLFKVAERRPASLRDLNELGLSPIEIKIHGKRMLDI LAKAQQSAPDSWPEPIRRLVDFPQYKAELKRIKAMVEDKAKASNIPPELIASKKIIHQ YFTWSWRMNDEERARSDKPMLLQGWRHELVGHLLAQ" misc_feature 2110556..2111650 /locus_tag="B565_1888" /note="ribonuclease D; Provisional; Region: PRK10829" /db_xref="CDD:182762" misc_feature 2110586..2111104 /locus_tag="B565_1888" /note="DEDDy 3'-5' exonuclease domain of Ribonuclease D and similar proteins; Region: RNaseD_exo; cd06142" /db_xref="CDD:176654" misc_feature order(2110634..2110645,2110787..2110792,2110796..2110804, 2110898..2110903,2111000..2111002,2111012..2111014) /locus_tag="B565_1888" /note="putative active site [active]" /db_xref="CDD:176654" misc_feature order(2110634..2110636,2110640..2110642,2110802..2110804, 2111000..2111002,2111012..2111014) /locus_tag="B565_1888" /note="catalytic site [active]" /db_xref="CDD:176654" misc_feature order(2110637..2110645,2110787..2110792,2110796..2110801, 2110898..2110903,2111000..2111002,2111012..2111014) /locus_tag="B565_1888" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:176654" misc_feature 2111186..2111386 /locus_tag="B565_1888" /note="HRDC domain; Region: HRDC; cl02578" /db_xref="CDD:154997" gene complement(2111858..2112502) /locus_tag="B565_1889" /db_xref="GeneID:10487806" CDS complement(2111858..2112502) /locus_tag="B565_1889" /codon_start=1 /transl_table=11 /product="metallo-beta-lactamase family protein" /protein_id="YP_004392541.1" /db_xref="GI:330829589" /db_xref="GeneID:10487806" /translation="MLKFEVIPVTQFAQNCSLIWCDETHQAALIDPGGEADKLLTAIA KRGLTLTHILLTHGHLDHVGAAAELREKTGVAITGPHKEDTFWLDMLPQQSQMFGFAH TPAFTPDRWLEQGDKVQLGQCELDVYFCPGHTPGHIVLLNQAEKLAWVGDVLFAGSIG RTDFPRGDHGTLIKSINETLLPLGDEIVFIPGHGPSSTFGREKVSNPYLTQPIW" misc_feature complement(2111894..2112502) /locus_tag="B565_1889" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" gene complement(2112525..2113640) /locus_tag="B565_1890" /db_xref="GeneID:10487807" CDS complement(2112525..2113640) /locus_tag="B565_1890" /codon_start=1 /transl_table=11 /product="tRNA 2-selenouridine synthase" /protein_id="YP_004392542.1" /db_xref="GI:330829590" /db_xref="GeneID:10487807" /translation="MSELPLATDYAQIFLGDVPLIDVRAPIEFKEGAFPCSTSLPLMT DDERAQVGTCFKKQGQAAAIELGHKLVGGAVRAERLESWLAQLRQQPDAVLYCFRGGL RSQTVQQWLAEAGVTRPRVAGGYKELRRFLIDTQDKASAECHWSVLTGMTGSGKTHML DQVTQAVDLEGHAHHRGSSFGQLPGGQPSNINFENNMAIELLKRRHRGEHAFVVEDES RLIGRCCLPLSLHEAMSQAPLVVVDVPQIDRAEQIREDYVHDLWLRYQAMYGQEAGWP LFAAYLTDALARLKRRLGDLVHRELDALMQTALTEQEKSGDTALHLAWITLLLTRYYD PMYLYQLGNKQERIVFRGDKQACLDYFAEQHASALRS" misc_feature complement(2112546..2113634) /locus_tag="B565_1890" /note="tRNA 2-selenouridine synthase; Provisional; Region: PRK11784" /db_xref="CDD:183313" misc_feature complement(2113245..2113622) /locus_tag="B565_1890" /note="Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB; Region: RHOD_YbbB; cd01520" /db_xref="CDD:29083" misc_feature complement(2113350..2113352) /locus_tag="B565_1890" /note="active site residue [active]" /db_xref="CDD:29083" gene complement(2113637..2114674) /locus_tag="B565_1891" /db_xref="GeneID:10487808" CDS complement(2113637..2114674) /locus_tag="B565_1891" /codon_start=1 /transl_table=11 /product="Selenide, water dikinase" /protein_id="YP_004392543.1" /db_xref="GI:330829591" /db_xref="GeneID:10487808" /translation="MSSIRLTQYSHGAGCGCKISPKVLDTILKSQIPGFNDPTLIVGN SSKDDAAVVDIGNGQGIVSTTDFFMPIVDDPFTFGRIAATNAISDIYAMGGKPIVAIA ILGWPINTLPAEVAQQVIDGGRQVCHEAGISLAGGHSIDAPEPIFGLAVTGIVPLDAI KQNDTAKVGDTLYLTKPLGIGILTTAQKKGKLKPEHEQLAPNAMCTLNKIGQRFAELP GVHAMTDVTGFGLAGHLLEMCEGSGVSASLDFKALPLLDEVDYYLSEGCVPGGTLRNH DSYGHKLDAMDDRTRNIMCDPQTSGGLLVAVGKESEAELLAIAQEVGLELSPIGQIKP LDGSRFIEIVQ" misc_feature complement(2113658..2114674) /locus_tag="B565_1891" /note="selenophosphate synthetase; Provisional; Region: PRK00943" /db_xref="CDD:179176" misc_feature complement(2113679..2114659) /locus_tag="B565_1891" /note="Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes. The...; Region: SelD; cd02195" /db_xref="CDD:100031" misc_feature complement(order(2113964..2113966,2114225..2114227, 2114237..2114242,2114261..2114263,2114360..2114362, 2114369..2114371,2114378..2114380,2114408..2114410, 2114474..2114476,2114480..2114482,2114486..2114497)) /locus_tag="B565_1891" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100031" misc_feature complement(order(2114261..2114269,2114408..2114410, 2114420..2114422)) /locus_tag="B565_1891" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:100031" gene 2115080..2115508 /locus_tag="B565_1892" /db_xref="GeneID:10487809" CDS 2115080..2115508 /locus_tag="B565_1892" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004392544.1" /db_xref="GI:330829592" /db_xref="GeneID:10487809" /translation="MTTTFLVNHPITTAQFAALLAQTSLGARRPLEHPATLQGMLDHA NLLITAWQGETLVGVARSVTDFHFCCYLSDLAVAESVQGQGIGKALIRETFLQLQPGC KLILLAAPQAVAYYPKLGFSQHPSAWVMSGLDELVLDELA" misc_feature 2115227..2115442 /locus_tag="B565_1892" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(2115543..2116727) /locus_tag="B565_1893" /db_xref="GeneID:10487810" CDS complement(2115543..2116727) /locus_tag="B565_1893" /codon_start=1 /transl_table=11 /product="acyltransferase" /protein_id="YP_004392545.1" /db_xref="GI:330829593" /db_xref="GeneID:10487810" /translation="MNQSLPLLTPLRGIAALMVVLFHARLLLFPQWMESIAGHTQLIE NGYLWVDLFFILSGVVLAHVYGEAFTRTPRTVGYGRFLWLRLTRVYPLYLVTLLLLVG WELYKAQHGVGFYAGPLFKMWEWEGMPPFGSPFTPAEALPSALLLLQVVTDHGLTWNF AAWSLSVEWISYLLFPLLIPLAVTRSRWSHLAPLLALTVLAFIVHSRGTLDVTSGALA VGRGVSEFVLGLWLLPRVKAAKNFPMMKRDLPLLVAFVLPFALMQFTMTPQLTLLLIG SYIMLIWIAAAQGERRSPLLHLLDNRFTNWLGDLSYSIYLLHALVLLTGCELIHYLAP GITEWWYGQTNPLLGIVATLLMLAVLISLSALSYHLLERPLQRRLRRWGKSRQPALER AG" misc_feature complement(2115621..2116727) /locus_tag="B565_1893" /note="Predicted acyltransferases [Lipid metabolism]; Region: COG1835" /db_xref="CDD:32020" gene complement(2117073..2118266) /locus_tag="B565_1894" /db_xref="GeneID:10487811" CDS complement(2117073..2118266) /locus_tag="B565_1894" /codon_start=1 /transl_table=11 /product="ribosomal RNA large subunit methyltransferase I" /protein_id="YP_004392546.1" /db_xref="GI:330829594" /db_xref="GeneID:10487811" /translation="MSASIYLVKGREKSLLRRHPWIFSKGIERVQGNPIDGDTVEIYA NDGKWLARGAWSGSSQIRARVWTFDKDETVDLDFFIRRLKYAQESRDPLIKRQGLTGY RLCAAESDGLPGLTIDRYADFLVCQILSAGAEFQRELITQALRTLYPECSIYERSDVA VRKKEGLKERTGVIYGETPNEPVVIEENGGVKILVDIRNGHKTGFYLDQRDNRQAAAK YTEGKRVLNCFCYTGGFGVYALKGGAKEVVNVDLSQNALDIARQNAELNGLDTSNTQF VRHDVFKLLREYREKGENFDVIVLDPPKFAESKAQLLGACRGYKDINMLAFQLLAPGG VLLTYSCSGLMEQSLFQKIVADAALDAGRDAQILELLSQASDHPIGTAYPEGFYLKGL VVRAR" misc_feature complement(2117082..2118266) /locus_tag="B565_1894" /note="23S rRNA m(5)C1962 methyltransferase; Provisional; Region: PRK15128" /db_xref="CDD:185082" misc_feature complement(2118060..2118254) /locus_tag="B565_1894" /note="PUA domain; Region: PUA; cl00607" /db_xref="CDD:153884" misc_feature complement(2117253..2117597) /locus_tag="B565_1894" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(2117364..2117366,2117424..2117432, 2117511..2117516,2117565..2117585)) /locus_tag="B565_1894" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(2118380..2119810) /locus_tag="B565_1895" /db_xref="GeneID:10487812" CDS complement(2118380..2119810) /locus_tag="B565_1895" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004392547.1" /db_xref="GI:330829595" /db_xref="GeneID:10487812" /translation="MKEVKFRWVDRYLIHLTISEKFHIAFWLPLFIIAFLSWYMLAAS HQQEISLRVAQLQQRVETTAQLVSQQPTLVLPADLRLARQGSSGLQQQGDHYLFSAPA GQAGYVTGDLDTSNLSMWEGQGSTLLLIGALAALMALVIHYMMTFVSGALYSTNKALQ TVADGDLTFRLNFFPVRDEFSTLAGSIDRFTDRQHQIVKLVEESAEALTMAADEFRDH AREGESMARSQRQHMDSLATAMEQMSAAIREVARNANDTLQQTHQSSEEAANGANRVA RTIEAIRTLADEIGNASGAVERLTHNANRINEVVNVINAISQQTNLLALNAAIEAARA GEQGRGFAVVADEVRTLASRTQQATVEIQQMIEELQTGTGALNEIMEKTVGRAASSQQ LISEVGLDIEKLSNHSDAVLEMSTQIATSSEEQSSVAAEITHNLDQVRHEAAQVEESA SASVAGTQGLKATASELAQALKGIKL" misc_feature complement(2118386..2119135) /locus_tag="B565_1895" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(2118383..2119024) /locus_tag="B565_1895" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 2119893..2120165 /locus_tag="B565_1896" /db_xref="GeneID:10487813" CDS 2119893..2120165 /locus_tag="B565_1896" /codon_start=1 /transl_table=11 /product="acylphosphatase" /protein_id="YP_004392548.1" /db_xref="GI:330829596" /db_xref="GeneID:10487813" /translation="MGEQSFVIRVWGQVQGVGFRYFTRERALQLGLRGHAYNLEDGSV EILISGPAQGVQMMLGWLEHGPRTARVTRMEYEEALPPTGQGFHTN" misc_feature 2119893..2120156 /locus_tag="B565_1896" /note="Acylphosphatase; Region: Acylphosphatase; cl00551" /db_xref="CDD:193864" gene 2120181..2120642 /locus_tag="B565_1897" /db_xref="GeneID:10487814" CDS 2120181..2120642 /locus_tag="B565_1897" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392549.1" /db_xref="GI:330829597" /db_xref="GeneID:10487814" /translation="MVADTRDPLLAQARVLVASYRHAARAVRREASETHVHGYRIAAR RMQALLALWRPALCHSKLERRLQRAIGRLSALRDAQVYAARFGASSTIVLPKVTVPLF SGMLARWLDALEQTPDTSGLARHYRRHLARRLDCQQAELVGLKVAILDSPL" misc_feature 2120211..>2120438 /locus_tag="B565_1897" /note="CHAD domain; Region: CHAD; cl10506" /db_xref="CDD:195980" gene complement(2120753..2122831) /locus_tag="B565_1898" /db_xref="GeneID:10487815" CDS complement(2120753..2122831) /locus_tag="B565_1898" /codon_start=1 /transl_table=11 /product="methionyl-tRNA synthetase" /protein_id="YP_004392550.1" /db_xref="GI:330829598" /db_xref="GeneID:10487815" /translation="MHGTLSSQQAHQERNMATDPRKMLVTCALPYANGSIHLGHMLEH IQADIWVRYQRMRGHQVHFICADDAHGTPIMLKAQQMGITPEEMIAAVSKEHQADFAG FNISFDNYHSTHSDENRELAELIYGRLKNGGFIKSRTISQLFDPEKSMFLPDRFVKGT CPKCKSPEQYGDNCDSCGATYSPTELIDPKSAVSGATPVMKDSEHFFFDLPQFEKWLS EWVRGSGAIQEEMANKMQEWFESGLQQWDITRDAPYFGFEIPGAPGKYFYVWLDAPIG YMASFKNLCNKRGDIDFDSYWKADSDAELYHFIGKDIAYFHCLFWPSMLEGANFRKPT KVNVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYAAKLNSRIDDLDLNLED FVQRVNADVVNKLVNLASRNAGFIAKRFGGKLAATCAEPELYAEFANARTAIAEAYES REFSRAIREIMALADKANRYVDDKAPWVIAKQEGADAELQAVCSVGINLFRVLMAYLK PVMPLLAERAEAFLAETLSWDGIEMPLVDHTVAPFKALFSRIEPAKIEAMIEASKEDL AKEQAPKVTGPLADDPISETITYDDFAKIDLRVALIKKAEAVPEAEKLLKLQLDIGGE TRQVFAGIKSAYNPEDLEGKLTVMVANLAPRKMRFGMSEGMVLAAGPGGKDLWILEPQ EGAQPGMRVK" misc_feature complement(2120756..2122774) /locus_tag="B565_1898" /note="methionyl-tRNA synthetase; Reviewed; Region: metG; PRK00133" /db_xref="CDD:178889" misc_feature complement(2121671..2122768) /locus_tag="B565_1898" /note="catalytic core domain of methioninyl-tRNA synthetases; Region: MetRS_core; cd00814" /db_xref="CDD:173907" misc_feature complement(order(2121881..2121883,2121893..2121895, 2122001..2122003,2122010..2122015,2122022..2122024, 2122628..2122630,2122739..2122741,2122745..2122750)) /locus_tag="B565_1898" /note="active site" /db_xref="CDD:173907" misc_feature complement(2122712..2122723) /locus_tag="B565_1898" /note="HIGH motif; other site" /db_xref="CDD:173907" misc_feature complement(2121776..2121790) /locus_tag="B565_1898" /note="KMSKS motif; other site" /db_xref="CDD:173907" misc_feature complement(2121296..2121664) /locus_tag="B565_1898" /note="Anticodon-binding domain of methionyl tRNA synthetases; Region: Anticodon_Ia_Met; cd07957" /db_xref="CDD:153411" misc_feature complement(order(2121401..2121403,2121416..2121421, 2121425..2121430,2121587..2121592,2121599..2121604, 2121611..2121616,2121623..2121628,2121635..2121640, 2121659..2121661)) /locus_tag="B565_1898" /note="tRNA binding surface [nucleotide binding]; other site" /db_xref="CDD:153411" misc_feature complement(order(2121401..2121403,2121419..2121421, 2121587..2121592,2121599..2121604,2121611..2121616, 2121623..2121628,2121638..2121640)) /locus_tag="B565_1898" /note="anticodon binding site; other site" /db_xref="CDD:153411" misc_feature complement(2120756..2121073) /locus_tag="B565_1898" /note="tRNA-binding-domain-containing Escherichia coli methionyl-tRNA synthetase (EcMetRS)-like proteins. This family includes EcMetRS and Aquifex aeolicus Trbp111 (AaTrbp111). This domain has general tRNA binding properties. MetRS aminoacylates methionine...; Region: tRNA_bind_EcMetRS_like; cd02800" /db_xref="CDD:48402" misc_feature complement(order(2120756..2120767,2120777..2120779, 2120786..2120788,2120792..2120794,2120798..2120800, 2120819..2120830,2120864..2120866,2120873..2120881, 2120927..2120929,2121068..2121070)) /locus_tag="B565_1898" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48402" misc_feature complement(order(2120837..2120839,2120846..2120848, 2120867..2120869,2120879..2120881,2120957..2120959, 2120993..2120995)) /locus_tag="B565_1898" /note="putative tRNA-binding site [nucleotide binding]; other site" /db_xref="CDD:48402" gene 2122973..2124055 /locus_tag="B565_1899" /db_xref="GeneID:10487816" CDS 2122973..2124055 /locus_tag="B565_1899" /codon_start=1 /transl_table=11 /product="Mrp protein" /protein_id="YP_004392551.1" /db_xref="GI:330829599" /db_xref="GeneID:10487816" /translation="MVIDSVKQILAEFKPAGWHKDLVDAGFVREIINQGQGLTIRLVL PFAGLSLLDQLKENYDARLRSATGAARIDWALEIDVASMPRAQGLNAVQGIRNIIVVA SGKGGVGKSTTAVNLALALQKEGARVAILDADIYGPSIPTMMGTLTERPVSHDGKLME PVMACGLKSNSIGYLVSEQDATIWRGPMASKALAQILHETRWGEVDYLVVDMPPGTGD IQLTMAQQVPTSAAVIVTTPQDVALADARKGIAMFNKVNVPVLGIIENMSYHVCSACG HHEPLFGTGGGQKMAEQYQVALLGQLPLHIDIRQHMDDGCPTVFGAPEGSLAQAYLKL ARRVGAELFFSAKPIATPLYAMALDE" misc_feature 2122988..2124025 /locus_tag="B565_1899" /note="antiporter inner membrane protein; Provisional; Region: PRK11670" /db_xref="CDD:183270" misc_feature 2123318..2123887 /locus_tag="B565_1899" /note="MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions...; Region: MRP-like; cd02037" /db_xref="CDD:73300" gene 2124190..2124810 /locus_tag="B565_1900" /db_xref="GeneID:10487817" CDS 2124190..2124810 /locus_tag="B565_1900" /codon_start=1 /transl_table=11 /product="Uridine kinase" /protein_id="YP_004392552.1" /db_xref="GI:330829600" /db_xref="GeneID:10487817" /translation="MIIGIAGASASGKSLIAQTIYEELVAELGAGQIGVITEDCYYRD QTHLTMEERVKTNYDHPNALDHDLLVQHLSQLVKGDAVAIPQYSYTEHTRMNEVTPFA PRRVIILEGILLLTDSRLRDLMDASIFMDTPLDICLLRRLVRDVQERGRTMDSVLKQY QKTVRPMFLQFIEPSKQYADVIVPRGGKNRIAIDMLKARIRHMLIG" misc_feature 2124190..2124804 /locus_tag="B565_1900" /note="Uridine kinase [Nucleotide transport and metabolism]; Region: Udk; COG0572" /db_xref="CDD:30917" misc_feature 2124193..2124795 /locus_tag="B565_1900" /note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48), also known as uridine kinase or uridine-cytidine kinase (UCK), catalyzes the reversible phosphoryl transfer from ATP to uridine or cytidine to yield UMP or CMP. In the primidine nucleotide-salvage...; Region: UMPK; cd02023" /db_xref="CDD:30196" misc_feature order(2124229..2124231,2124607..2124609,2124751..2124753) /locus_tag="B565_1900" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:30196" misc_feature order(2124304..2124306,2124370..2124372,2124610..2124612) /locus_tag="B565_1900" /note="Sugar specificity; other site" /db_xref="CDD:30196" misc_feature order(2124313..2124315,2124361..2124363,2124448..2124450, 2124454..2124456,2124463..2124465,2124634..2124636) /locus_tag="B565_1900" /note="Pyrimidine base specificity; other site" /db_xref="CDD:30196" gene 2124874..2125455 /locus_tag="B565_1901" /db_xref="GeneID:10487818" CDS 2124874..2125455 /locus_tag="B565_1901" /codon_start=1 /transl_table=11 /product="deoxycytidine triphosphate deaminase" /protein_id="YP_004392553.1" /db_xref="GI:330829601" /db_xref="GeneID:10487818" /translation="MRLCDTDIERHLDEGKIVIEPRPGVERISGVSVDVLLGNEFRVF RDHTAPYIDLSGPSSEMADAIDRVMSDEIHIPDGEAFYLHPGQLALAVTYESVTLPAD IVGWLDGRSSLARLGLMVHVTAHRIDPGWSGRIVLEFYNGGKLPLALRPKMKIGALNF EMLSGVAARPYNKRENAKYKSQQGAVASRINQD" misc_feature 2124880..>2125287 /locus_tag="B565_1901" /note="2'-deoxycytidine 5'-triphosphate deaminase (DCD); Region: DCD; pfam06559" /db_xref="CDD:191556" misc_feature 2125102..2125353 /locus_tag="B565_1901" /note="Trimeric dUTP diphosphatases; Region: trimeric_dUTPase; cd07557" /db_xref="CDD:143638" misc_feature order(2125117..2125119,2125132..2125137,2125141..2125143, 2125189..2125191,2125195..2125212,2125225..2125233, 2125246..2125248,2125258..2125260,2125279..2125281, 2125285..2125287,2125291..2125293,2125297..2125299, 2125309..2125323,2125330..2125332,2125342..2125344) /locus_tag="B565_1901" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:143638" misc_feature order(2125201..2125209,2125246..2125248,2125252..2125257, 2125264..2125266,2125276..2125281) /locus_tag="B565_1901" /note="active site" /db_xref="CDD:143638" gene 2125776..2127302 /locus_tag="B565_1902" /db_xref="GeneID:10487819" CDS 2125776..2127302 /locus_tag="B565_1902" /codon_start=1 /transl_table=11 /product="Low-affinity inorganic phosphate transporter 1" /protein_id="YP_004392554.1" /db_xref="GI:330829602" /db_xref="GeneID:10487819" /translation="MVLAAIWHNPPQLINRLFFMFEMFSGLGLWWSIGLVLAVFFVLA YEFINGFHDTANAVATVIYTKAMPAHLAVVASGIFNFFGVMFGGLGVAYAIVHLLPID LLLGMDSTQGLIMVFSLLFSAIVWNLGTWFFGIPASSSHTLIGSILGVGGAYAWITHK PVTEGINVGKAIDIMLSLIISPTIGFIIAALLLLAMKRIWTSNKIHKTPEERQLVDGK KHPPFWARLTLVASAMGVSFVHGSNDGQKGIGLVMLVLICMAPAYFALDMNSRAYDLD RTQDANQRIMEIYQRNQSALSGVINFSAPATAQEELMTHCSADGVLQAMATLDARLGA VRTYDQMSLTDRREVRRLLLCIDDTARKAAKLPLPAKELTDLAKWRKDLTATAEYAPT WVIVSIALALGCGTMVGWRRIVHTVGEKIGTTGMTYSQGIAAQITAATSIGVASLTGM PVSTTHILSSAVAGTMVANKSGLQSQTIKTILMAWVLTLPLTMLLSGGLFIVSHHLFG " misc_feature 2125878..>2126573 /locus_tag="B565_1902" /note="Phosphate transporter family; Region: PHO4; cl00396" /db_xref="CDD:193801" misc_feature <2126925..2127263 /locus_tag="B565_1902" /note="Phosphate transporter family; Region: PHO4; cl00396" /db_xref="CDD:193801" gene complement(2127435..2127686) /locus_tag="B565_1903" /db_xref="GeneID:10487820" CDS complement(2127435..2127686) /locus_tag="B565_1903" /codon_start=1 /transl_table=11 /product="Fe-S protein-like protein" /protein_id="YP_004392555.1" /db_xref="GI:330829603" /db_xref="GeneID:10487820" /translation="MEQLEIFPLQSPCIGVCEVNNKGYCKGCLRNREERFNWLTMTPA QQQEVMRLCRDRKRRVEAARRKAREGDQPEPMPQSGWDF" misc_feature complement(<2127528..2127677) /locus_tag="B565_1903" /note="Protein of unknown function (DUF1289); Region: DUF1289; cl01304" /db_xref="CDD:154323" gene 2127837..2128988 /locus_tag="B565_1904" /db_xref="GeneID:10487821" CDS 2127837..2128988 /locus_tag="B565_1904" /codon_start=1 /transl_table=11 /product="membrane-bound lytic murein transglycosylase A" /protein_id="YP_004392556.1" /db_xref="GI:330829604" /db_xref="GeneID:10487821" /translation="MNKHAYWLTAAVLGLAGCAGNSDKAEVPKKQTDNRCFLNCEVPE NLGKQYLDGTLPEDLVRVERVNSRARADYSKFGPQSRLVLERSGKMTRRYGELYHQLS RWVAGGGNPADITRYGISLAQLGGADRMGNVLFTGYYSPVLEVRHRPDAKYKYPIYAM PKCGGRCPTRAEIHQGALANRGLELGYSKSLIDNFLMDVQGSGFVHYGDDDRLQYLGY SGKNGHGYVSIGRVLIDRGEVPKEQMSMKAIKEWANRQPEETVKELVEQNPSYVFFER RPTNDVIGAAGIPLLPLAAVAADKTLLPMGTPILAEVPLLDKEGNWTGKHQLRLLIAL DVGGAVKKGHLDLYHGMGEKAGVAAGHYKHFGRVWKLGLHHGPTAAPWL" misc_feature 2127852..2128952 /locus_tag="B565_1904" /note="murein transglycosylase A; Provisional; Region: mltA; PRK11162" /db_xref="CDD:183005" misc_feature 2128260..2128658 /locus_tag="B565_1904" /note="MltA specific insert domain; Region: MltA; pfam03562" /db_xref="CDD:190674" misc_feature 2128731..2128949 /locus_tag="B565_1904" /note="3D domain; Region: 3D; cl01439" /db_xref="CDD:194136" gene complement(2129116..2129439) /locus_tag="B565_1905" /db_xref="GeneID:10487822" CDS complement(2129116..2129439) /locus_tag="B565_1905" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster binding protein" /protein_id="YP_004392557.1" /db_xref="GI:330829605" /db_xref="GeneID:10487822" /translation="MSDATNTLTPAPHAPAEQQAVVAPRVHTRDGAVLHAHAGESVLE TLERHGHHVEFQCRSGYCGACRTPLMAGKVHYPAVPLAFVAQGECLPCCCKPVGAIRL DIQKS" misc_feature complement(2129131..2129355) /locus_tag="B565_1905" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature complement(order(2129164..2129169,2129245..2129256, 2129260..2129262,2129269..2129271,2129278..2129283)) /locus_tag="B565_1905" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature complement(order(2129164..2129166,2129245..2129247, 2129254..2129256,2129269..2129271)) /locus_tag="B565_1905" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" gene complement(2129436..2130617) /locus_tag="B565_1906" /db_xref="GeneID:10487823" CDS complement(2129436..2130617) /locus_tag="B565_1906" /codon_start=1 /transl_table=11 /product="ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like protein" /protein_id="YP_004392558.1" /db_xref="GI:330829606" /db_xref="GeneID:10487823" /translation="MKLPLSCFLYSHILVTMAYSTFCQTQNDQLKEPMFFGQSVNVAR YDQQKHEVFERLIEKQLSFFWRPEEVDVSRDRIDYQALPPHEQHIFISNLKYQTLLDS IQGRSPNVALLPLVSIPELETWIETWAFSETIHSRSYTHIIRNIVNTPAQVFDDIVTN EQILKRAGSISHFYDDLIEATALYNLHGEGTHTVAGREVTITLRELKKKLYLCLMSVN ALEAIRFYVSFACSFAFAERELMEGNAKIIKMIARDEALHLTGTQHMLNLMRTGQDDP EMAEIAAECEQACFEIFKEAAIQEKEWAEYLFQDGSMIGLNKDILCQYVEYITNLRMS AVGLQPAFAGTKQNPIPWINTWLSSDNVQVAPQEVEVSSYLVGQIDSEVNADDLGDFE L" misc_feature complement(2129550..2130485) /locus_tag="B565_1906" /note="Ribonucleotide Reductase, R2/beta subunit, ferritin-like diiron-binding domain; Region: RNRR2; cd01049" /db_xref="CDD:153108" misc_feature complement(order(2130144..2130146,2130153..2130158, 2130198..2130200,2130207..2130209,2130216..2130221, 2130228..2130230,2130237..2130242,2130435..2130437, 2130456..2130458)) /locus_tag="B565_1906" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:153108" misc_feature complement(order(2129844..2129846,2129856..2129861, 2130201..2130203,2130213..2130215,2130222..2130224, 2130315..2130317,2130423..2130425)) /locus_tag="B565_1906" /note="putative radical transfer pathway; other site" /db_xref="CDD:153108" misc_feature complement(order(2129844..2129846,2129853..2129855, 2129955..2129957,2130213..2130215,2130222..2130224, 2130315..2130317)) /locus_tag="B565_1906" /note="diiron center [ion binding]; other site" /db_xref="CDD:153108" misc_feature complement(2130201..2130203) /locus_tag="B565_1906" /note="tyrosyl radical; other site" /db_xref="CDD:153108" gene complement(2130650..2132917) /locus_tag="B565_1907" /db_xref="GeneID:10487824" CDS complement(2130650..2132917) /locus_tag="B565_1907" /codon_start=1 /transl_table=11 /product="ribonucleotide-diphosphate reductase subunit alpha" /protein_id="YP_004392559.1" /db_xref="GI:330829607" /db_xref="GeneID:10487824" /translation="MNLFVTKRNGHKEPIDLDKIHRVLDWAAEGLDNVSVSQVELKSH IQFYDGIRTADIHETIIKATADLISEQTPDYQYMAARLAIFHLRKKAYGQFEPPHLYQ HVARLVDMGKYDKHLLEDYTQAEFEELNTHLDHWRDMDFSYAAVKQLEGKYLVQNRVT GEIYESPQFLYILVAACLFSKYPKDTRLDYIKRFYDAVSTFKISLPTPIMSGVRTPTR QFSSCVLIECDDSLDSINATASSIVRYVSQRAGIGINAGRIRGLGSPIRGGEAFHTGC IPFYKYFQTAVKCCSQGGVRGGAATLFYPLWHTEVESLLVLKNNRGVEENRVRHMDYG VQINKLMYQRLIKGGDITLFSPSDAPGLYDAFFADQDKFEELYVKYEQDPAIRKKTLK AVDLFSLMMQERAGTGRIYIQNVDHCNTHSPFDPSVAPVRQSNLCLEIALPTKPLNNI DDESGEIALCTLSAFNLGAIEKLEDLEEMADLAVRALDALLDYQDYPIAAAKKGSMGR RTLGIGVINYAYYLAKNGARYSDGSGLALTHRTFEAIQYYLLKASVQLAREFGPCPLF GETTYAQGILPIDTYKKDLDALCNEPLHLDWESLREEIKSVGLRNSTLTALMPSETSS QISNATNGIEPPRGLVSVKASKDGILKQVVPEYDRLKDQYELLWKQPSVDGYLQLVGI MQKFVDQAISANTNYDPARFEGNKVPMKQLLKDLLTAYKYGLKTLYYHNTRDGADDAQ TDLQDDGCAGGACKI" misc_feature complement(2130653..2132914) /locus_tag="B565_1907" /note="ribonucleotide-diphosphate reductase subunit alpha; Validated; Region: PRK09103" /db_xref="CDD:181649" misc_feature complement(2132648..2132911) /locus_tag="B565_1907" /note="ATP cone domain; Region: ATP-cone; pfam03477" /db_xref="CDD:190653" misc_feature complement(2130722..2132419) /locus_tag="B565_1907" /note="Class I ribonucleotide reductase; Region: RNR_I; cd01679" /db_xref="CDD:153088" misc_feature complement(order(2131049..2131066,2131532..2131534, 2131601..2131603,2131607..2131609,2131613..2131615, 2132165..2132167,2132249..2132254,2132294..2132299)) /locus_tag="B565_1907" /note="active site" /db_xref="CDD:153088" misc_feature complement(order(2132039..2132053,2132060..2132065, 2132072..2132077,2132081..2132086,2132096..2132098, 2132132..2132134,2132177..2132179,2132186..2132191, 2132198..2132203,2132210..2132212,2132219..2132224, 2132261..2132263)) /locus_tag="B565_1907" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:153088" misc_feature complement(order(2130731..2130736,2131538..2131540, 2131601..2131603,2131607..2131609,2131613..2131615, 2132249..2132251)) /locus_tag="B565_1907" /note="catalytic residues [active]" /db_xref="CDD:153088" misc_feature complement(order(2132081..2132083,2132096..2132098, 2132138..2132140,2132177..2132179,2132213..2132215, 2132222..2132230)) /locus_tag="B565_1907" /note="effector binding site; other site" /db_xref="CDD:153088" misc_feature complement(order(2130755..2130760,2130764..2130769, 2130779..2130784,2130788..2130796,2131703..2131705, 2131724..2131726,2131877..2131885,2131889..2131894, 2131901..2131903)) /locus_tag="B565_1907" /note="R2 peptide binding site; other site" /db_xref="CDD:153088" gene complement(2133541..2134236) /locus_tag="B565_1908" /db_xref="GeneID:10487825" CDS complement(2133541..2134236) /locus_tag="B565_1908" /codon_start=1 /transl_table=11 /product="phosphoglycolate phosphatase" /protein_id="YP_004392560.1" /db_xref="GI:330829608" /db_xref="GeneID:10487825" /translation="MSASHPLPLHGVLFDLDGTLLDTAPDLGAAVNHVLISEGFAPLS DDIIRQTTSHGALGLLKAGLGDELLEELGATRLRNALLDYYAANLCVGTRPYEGMVDL IEWLDEKQLPWGIVTNKPAFLTEPLLAALPQLASCGVTVSADTLPVRKPNPAPMFFAC EKLGVEAAHCLYVGDHVRDIEAGRNAGMRTAVAGWGYLNDEEDPAQWGADLHFDTVQA LHHWLRYELTAKA" misc_feature complement(2133568..2134206) /locus_tag="B565_1908" /note="Predicted phosphatases [General function prediction only]; Region: Gph; COG0546" /db_xref="CDD:30892" misc_feature complement(2133664..2133996) /locus_tag="B565_1908" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature complement(2133886..2133888) /locus_tag="B565_1908" /note="motif II; other site" /db_xref="CDD:119389" gene complement(2134236..2134952) /locus_tag="B565_1909" /db_xref="GeneID:10487826" CDS complement(2134236..2134952) /locus_tag="B565_1909" /codon_start=1 /transl_table=11 /product="3-demethylubiquinone-9 3-methyltransferase" /protein_id="YP_004392561.1" /db_xref="GI:330829609" /db_xref="GeneID:10487826" /translation="MNSDANVDLTEIAKFEAIASRWWDMEGEFKPLHQINPVRLDWIT DKSGGLFGKRILDIGCGGGILSESMARRGAKVTGIDMGKEPLGVARLHALEQGVELEY RQITAEAHAAEVPGQYDVVTCMEMLEHVPDPASVLRAIATLVRPGGRVFVSTINRNPK SYLMMIIGAEYLMKMVPKGTHDHKKFITPAELCRMGEAAGLLVRDMSGVHYAPLTNQF KLGKNVDVNYMVEFVRPEHG" misc_feature complement(2134245..2134937) /locus_tag="B565_1909" /note="bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional; Region: PRK05134" /db_xref="CDD:179944" misc_feature complement(2134494..2134793) /locus_tag="B565_1909" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(2134581..2134583,2134632..2134640, 2134710..2134715,2134761..2134781)) /locus_tag="B565_1909" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 2135151..2137898 /locus_tag="B565_1910" /db_xref="GeneID:10487827" CDS 2135151..2137898 /locus_tag="B565_1910" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit A" /protein_id="YP_004392562.1" /db_xref="GI:330829610" /db_xref="GeneID:10487827" /translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPV HRRVLFAMNELGNDWNKPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYML VDGQGNFGSVDGDSAAAMRYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMP TKVPNLLVNGSSGIAVGMATNIPPHNLTEIVNGCLALIENGDLTIDELMTYITGPDFP TGGIINGRSGIVQAYRTGRGSIYVRAKAEVEVDEKTSRETIIVHEIPYQVNKARLIEK IAELVKEKKIEGISALRDESDKDGMRIVIEIKRGESGEIVLNNLYKHTQMQTTFGINM VALDNNQPKVMNLKEILDAFLLHRREVVTRRTVFELRKARDRAHILEGLAVALANIDP IIELIRHSATPADAKAGLVAKGWELGNVAAMLEKAGDDAARPEWLEPEFGIREGQYFL TEQQAQAILDLRLHKLTGLEHEKILEEYQSLLDLIAELLHILASPARLMEVIRDELLA VREQYGDERRTEISMSSAEINIEDLITPEDVVVTLSHQGYVKYQPLSDYEAQRRGGRG KSATRIKEEDFVERLLVANTHDTILCFSTRGKVYWLKVYQLPEASRGARGRPIINLLP LEEGERITAILPVKEYDAEKYVFFATANGTVKKTSLSDFSRPLSSGIRAINLKEGDEL IGVDITDGSNEIMLFSDAGKVVRFAEGSGRADADVSDDVETDDDAGNDDDGSDNGEGT ESKGTFKGVRPMGRTAAGVRGIKLGAGDKVVSLIVPRGEGAILTATENGYGKRTALAE YPTKSRGTQGVISIKVDERNGKVIDAIQVEDTDQIMLITNGGTLVRTRVAEVSVIGRN TGGVRLIRTGEDETVVGLQRIAESDEDENDALAVDGEVSEGTDTATGTDAVDAGEAGD E" misc_feature 2135169..2137793 /locus_tag="B565_1910" /note="DNA gyrase subunit A; Validated; Region: PRK05560" /db_xref="CDD:180128" misc_feature 2135238..2136677 /locus_tag="B565_1910" /note="DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC), bacterial DNA gyrases (A subunit, GyrA),mammalian DNA toposiomerases II. DNA topoisomerases are essential enzymes that regulate the conformational changes in...; Region: TOP4c; cd00187" /db_xref="CDD:29149" misc_feature order(2135238..2135321,2135334..2135483,2135487..2135543, 2135547..2135618,2135625..2135627) /locus_tag="B565_1910" /note="CAP-like domain; other site" /db_xref="CDD:29149" misc_feature 2135514..2135516 /locus_tag="B565_1910" /note="Active site [active]" /db_xref="CDD:29149" misc_feature order(2136312..2136320,2136327..2136338,2136369..2136374, 2136516..2136566) /locus_tag="B565_1910" /note="primary dimer interface [polypeptide binding]; other site" /db_xref="CDD:29149" misc_feature 2136762..2136905 /locus_tag="B565_1910" /note="DNA gyrase C-terminal domain, beta-propeller; Region: DNA_gyraseA_C; pfam03989" /db_xref="CDD:190822" misc_feature 2136912..2137064 /locus_tag="B565_1910" /note="DNA gyrase C-terminal domain, beta-propeller; Region: DNA_gyraseA_C; pfam03989" /db_xref="CDD:190822" misc_feature 2137080..2137217 /locus_tag="B565_1910" /note="DNA gyrase C-terminal domain, beta-propeller; Region: DNA_gyraseA_C; pfam03989" /db_xref="CDD:190822" misc_feature 2137494..2137634 /locus_tag="B565_1910" /note="DNA gyrase C-terminal domain, beta-propeller; Region: DNA_gyraseA_C; pfam03989" /db_xref="CDD:190822" misc_feature 2137641..2137781 /locus_tag="B565_1910" /note="DNA gyrase C-terminal domain, beta-propeller; Region: DNA_gyraseA_C; pfam03989" /db_xref="CDD:190822" gene complement(2137976..2139403) /locus_tag="B565_1911" /db_xref="GeneID:10487828" CDS complement(2137976..2139403) /locus_tag="B565_1911" /codon_start=1 /transl_table=11 /product="alpha-amylase" /protein_id="YP_004392563.1" /db_xref="GI:330829611" /db_xref="GeneID:10487828" /translation="MKHTAGIWAIAGMLIAPLAHADVILHAFNWKYSEVTAKADLIKS AGYKQVLISPPLKSSGNEWWARYQPQDLRLVDSPLGNKQDLDQLITAMKARGIAVYVD VVLNHMANESWKRSDLNYPGNELLQSYASNPAYFERQKLFGDLGQNFLSGQDFHPKGC ISDWNNPGHVQYWRLCGGAGDKGLPDLDPNNWVVSQQQTYLKALKGMGIKGFRVDAVK HMSDYQINAVFTPEIKQGMHVFGEVITTGGAGSTDYERFLKPYLDSSGQGAYDFPLFA SLRGALGYGGSMNLLADPGAYGQALPGSRAVTFAVTHDIPTNDGFRYQILSQTDEKLA YAYLLGRDGGSPLVYSDHGETQAKDGLRWQDYYQRADLKGMIRFHNAVQGQPMQLVGS GDCFVLFKRGKQGLVGINKCDYEQEYWLDTARFEMNWYRNYRDVLDQGAVVNVQSQWV RVAIPARSARMWLQECSSRKISGES" misc_feature complement(2138957..2139340) /locus_tag="B565_1911" /note="Alpha amylase, catalytic domain; Region: Alpha-amylase; cl07893" /db_xref="CDD:164103" misc_feature complement(<2138240..2139301) /locus_tag="B565_1911" /note="Glycosidases [Carbohydrate transport and metabolism]; Region: AmyA; COG0366" /db_xref="CDD:30715" gene complement(2139979..2141034) /locus_tag="B565_1912" /db_xref="GeneID:10487829" CDS complement(2139979..2141034) /locus_tag="B565_1912" /codon_start=1 /transl_table=11 /product="Radical SAM domain-containing protein" /protein_id="YP_004392564.1" /db_xref="GI:330829612" /db_xref="GeneID:10487829" /translation="MAGRGSPHNIDHRFSGPLVEAVDDGWQSSDWDAAFTPSVPGTEV REIDARSIISYNNSPDVPFGRSINPYQGCEHGCIYCYARPSHAYLELSPGLDFESKLF AKRNAADLLRREFAKPAYQPQNIFIGANTDPYQPIEQRYRLTRQLLEVMLAHRHPVGL ITKSAMILRDLDLLTELAREGLCQVMVSVTTLNETLRRQLEPRASTGAGRLKVIEKLA NAGVLVGVLAAPMIPRLNEPELEQIIKSAAEAGASCADYILLRLPHELAPLFGDWLDT HYPGQKEAILNQLRASRGGGLNSTAFGTRMRGEGHFADLLAQRFRLISKRLDLGKRHI QLRLDGFIRPGEQLSLF" misc_feature complement(2140054..2140914) /locus_tag="B565_1912" /note="DNA repair photolyase [DNA replication, recombination, and repair]; Region: SplB; COG1533" /db_xref="CDD:31722" misc_feature complement(2140294..2140836) /locus_tag="B565_1912" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene 2141207..2141794 /locus_tag="B565_1913" /db_xref="GeneID:10487830" CDS 2141207..2141794 /locus_tag="B565_1913" /codon_start=1 /transl_table=11 /product="TPR repeat-containing protein" /protein_id="YP_004392565.1" /db_xref="GI:330829613" /db_xref="GeneID:10487830" /translation="MSPTTSRWLFICLLALVIWRLLPLSTEQEMAAANRAWRTGHFDE ATRIWLPLADQGQPRAQALMGWSHEVGQGSEQDIHQAISLYRQSAQAGDPFGQYRLAE LYLRGVGVKRDLRQAFHWMDQAARNGDVPAMLKVGVLHLMGVSGRVDLPQAKQWLYQA AQKGNKLALQVLQELALAEEGSSDFDFNWQSLLGE" misc_feature 2141378..2141485 /locus_tag="B565_1913" /note="Sel1 repeat; Region: Sel1; cl02723" /db_xref="CDD:194424" misc_feature 2141486..2141593 /locus_tag="B565_1913" /note="Sel1 repeat; Region: Sel1; cl02723" /db_xref="CDD:194424" gene 2142027..2143955 /locus_tag="B565_1914" /db_xref="GeneID:10487831" CDS 2142027..2143955 /locus_tag="B565_1914" /codon_start=1 /transl_table=11 /product="Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase" /protein_id="YP_004392566.1" /db_xref="GI:330829614" /db_xref="GeneID:10487831" /translation="MPIITLPDGSQRQFAHSVSVMDVAADIGPGLAKACIAGRVNGEL VDACELIEADAALAIITAKDEEGLDILRHSCAHLLGHAIKQLWPQTKMAIGPVIDNGF YYDVDLDRTLTDEDLAALEERMLALVAKDYDVIKKKVSWQEARDVFEARGESYKVEIL DQNIARDDQPGLYHHEEYIDMCRGPHVPNMRHCHHFKLLKMSGAYWRGDSNNKMLQRI YGTAWADKKQLKAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRE LETFIRGKLKEYDYQEVKGPFMMDRVLWERSGHWEKYAQAMFTTQSENREYAIKPMNC PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ IMEEVSGCIRMVYDVYGTFGFENIVVKLSTRPEQRIGSDEMWDRAEKALAEALELNGL KYDLQPGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFALPGRLGATYVGENNDRHVPV MIHRAILGSIERFIGILTEEYAGLFPTWLAPTQAVVMNITDNQADYAVKVAKALNDAG LRAKADLRNEKIGFKIREHTLKRVPFMLVCGDKEVEAGKIAVRTRKGADLGTYPVEEF IALLTQEVQTRGQKKVEE" misc_feature 2142027..2143940 /locus_tag="B565_1914" /note="threonyl-tRNA synthetase; Reviewed; Region: thrS; PRK00413" /db_xref="CDD:179011" misc_feature 2142036..>2142161 /locus_tag="B565_1914" /note="TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is a class II tRNA synthetase that couples threonine to its cognate tRNA. In addition to its catalytic and anticodon-binding domains, ThrRS has an N-terminal TGS domain, named after the ThrRS, GTPase...; Region: TGS_ThrRS_N; cd01667" /db_xref="CDD:133437" misc_feature 2142540..2142683 /locus_tag="B565_1914" /note="Threonyl and Alanyl tRNA synthetase second additional domain; Region: tRNA_SAD; cl08469" /db_xref="CDD:158351" misc_feature 2142750..2143643 /locus_tag="B565_1914" /note="Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain. ThrRS is a homodimer. It is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent...; Region: ThrRS_core; cd00771" /db_xref="CDD:29816" misc_feature order(2142759..2142761,2142798..2142800,2142951..2142953, 2142963..2142965,2142972..2142977,2143017..2143019, 2143113..2143115,2143119..2143121,2143125..2143133, 2143146..2143154,2143161..2143163,2143167..2143169, 2143452..2143454,2143461..2143466,2143476..2143478, 2143572..2143577,2143584..2143586) /locus_tag="B565_1914" /note="active site" /db_xref="CDD:29816" misc_feature order(2142771..2142773,2142789..2142791,2142795..2142803, 2142807..2142809,2142813..2142815,2142819..2142824, 2142828..2142830,2142837..2142839,2142882..2142887, 2142897..2142902,2142906..2142908,2142912..2142920, 2142924..2142926,2142978..2142986,2142990..2143001, 2143005..2143007,2143041..2143046,2143053..2143061, 2143065..2143073,2143110..2143112,2143116..2143118, 2143125..2143127,2143155..2143160,2143239..2143241, 2143365..2143373,2143518..2143520,2143524..2143526) /locus_tag="B565_1914" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29816" misc_feature 2142897..2142920 /locus_tag="B565_1914" /note="motif 1; other site" /db_xref="CDD:29816" misc_feature 2143110..2143121 /locus_tag="B565_1914" /note="motif 2; other site" /db_xref="CDD:29816" misc_feature 2143572..2143586 /locus_tag="B565_1914" /note="motif 3; other site" /db_xref="CDD:29816" misc_feature 2143641..2143910 /locus_tag="B565_1914" /note="ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is...; Region: ThrRS_anticodon; cd00860" /db_xref="CDD:29800" misc_feature order(2143665..2143670,2143773..2143775,2143791..2143793, 2143815..2143817,2143845..2143847,2143851..2143853) /locus_tag="B565_1914" /note="anticodon binding site; other site" /db_xref="CDD:29800" gene 2144100..2144507 /locus_tag="B565_1915" /db_xref="GeneID:10487832" CDS 2144100..2144507 /locus_tag="B565_1915" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-3" /protein_id="YP_004392567.1" /db_xref="GI:330829615" /db_xref="GeneID:10487832" /translation="MAAEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKTTKEQKKKQ KVVQVKEIKFRPGTDEGDYQVKLRNLVRFLEDGDKAKVTLRFRGREMAHQDLGIKVLE RVKNDLEELAVVESFPKVEGRQAVMVLAPKKKS" misc_feature <2144100..2144192 /locus_tag="B565_1915" /note="Translation initiation factor IF-3, N-terminal domain; Region: IF3_N; pfam05198" /db_xref="CDD:191228" misc_feature 2144259..2144495 /locus_tag="B565_1915" /note="Translation initiation factor IF-3, C-terminal domain; Region: IF3_C; pfam00707" /db_xref="CDD:189681" gene 2144594..2144791 /locus_tag="B565_1916" /db_xref="GeneID:10487833" CDS 2144594..2144791 /locus_tag="B565_1916" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L35" /protein_id="YP_004392568.1" /db_xref="GI:330829616" /db_xref="GeneID:10487833" /translation="MPKMKTNRGAAKRFKKTGSGRFKCKHNHLRHILTKKSSKRKRQL GPKFMVSAADHKRVVACLPYA" misc_feature 2144594..2144788 /locus_tag="B565_1916" /note="Ribosomal protein L35; Region: Ribosomal_L35p; cl00392" /db_xref="CDD:185963" gene 2144858..2145163 /locus_tag="B565_1917" /db_xref="GeneID:10487834" CDS 2144858..2145163 /locus_tag="B565_1917" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L20" /protein_id="YP_004392569.1" /db_xref="GI:330829617" /db_xref="GeneID:10487834" /translation="MKAAKGYYGARSRVYRVAVQAVTKAGQYAYRDRRQKKRQFRQLW IARINAAARQNGLSYSRLINGLKKASIEIDRKILSDIAVHDKMAFTALVEKAKAALV" misc_feature 2144858..2145139 /locus_tag="B565_1917" /note="Ribosomal protein L20; Region: Ribosomal_L20; cd07026" /db_xref="CDD:197305" misc_feature order(2144867..2144890,2144894..2144905,2144912..2144917, 2144927..2144932,2144939..2144983,2144987..2144995, 2145002..2145004,2145014..2145016,2145032..2145037, 2145044..2145049,2145056..2145058,2145080..2145088) /locus_tag="B565_1917" /note="23S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:197305" misc_feature order(2144912..2144914,2144924..2144926,2144933..2144938, 2144942..2144947,2144954..2144956,2145071..2145082, 2145089..2145091,2145107..2145112,2145128..2145133) /locus_tag="B565_1917" /note="L21 binding site [polypeptide binding]; other site" /db_xref="CDD:197305" misc_feature order(2144975..2144977,2144984..2144989,2144996..2144998, 2145005..2145010,2145014..2145016,2145086..2145088, 2145095..2145097,2145104..2145106) /locus_tag="B565_1917" /note="L13 binding site [polypeptide binding]; other site" /db_xref="CDD:197305" gene 2145543..2146526 /locus_tag="B565_1918" /db_xref="GeneID:10487835" CDS 2145543..2146526 /locus_tag="B565_1918" /codon_start=1 /transl_table=11 /product="Phenylalanyl-tRNA synthetase alpha chain" /protein_id="YP_004392570.1" /db_xref="GI:330829618" /db_xref="GeneID:10487835" /translation="MQQLEEVVGQARAEIEGVSDIATLDEIRVKYLGKKGFFTEQMKG LGALSAEERPAAGAVINQAKQQVQDALNERREALEVAVLNQKLAAETIDVSLPGRRIE NGGLHPVTRTIERIERLFGEMGFKVARGPEIEDGFHNFDALNIPAHHPARTDHDTFYF NPDLMLRTHTSGVQIRTMQQQQPPIRIIAPGRVYRNDYDMTHTPMFHQVEGLLVDEHA SFTELKGILHDFLRNYFEEDLTIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVH PNVLRSVGIDPEKYSGFAFGMGVERLTMLRYGVNDLRAFFENDLRFLKQFK" misc_feature 2145543..2146520 /locus_tag="B565_1918" /note="phenylalanyl-tRNA synthetase subunit alpha; Validated; Region: pheS; PRK00488" /db_xref="CDD:179046" misc_feature 2145588..2145806 /locus_tag="B565_1918" /note="Aminoacyl tRNA synthetase class II, N-terminal domain; Region: Phe_tRNA-synt_N; pfam02912" /db_xref="CDD:111764" misc_feature 2145861..2146505 /locus_tag="B565_1918" /note="Phenylalanyl-tRNA synthetase (PheRS) alpha chain catalytic core domain. PheRS belongs to class II aminoacyl-tRNA synthetases (aaRS) based upon its structure and the presence of three characteristic sequence motifs. This domain is primarily responsible...; Region: PheRS_alpha_core; cd00496" /db_xref="CDD:29807" misc_feature order(2145861..2145863,2145870..2145872,2145879..2145884, 2145903..2145905,2145918..2145923,2145927..2145935, 2145984..2145986,2145999..2146001,2146011..2146028, 2146071..2146073,2146092..2146100,2146110..2146112, 2146116..2146118,2146122..2146124,2146128..2146130, 2146149..2146151,2146200..2146208,2146212..2146217, 2146275..2146277,2146296..2146304,2146308..2146310, 2146368..2146373,2146488..2146490,2146494..2146502) /locus_tag="B565_1918" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29807" misc_feature 2145915..2145935 /locus_tag="B565_1918" /note="motif 1; other site" /db_xref="CDD:29807" misc_feature order(2145999..2146007,2146047..2146049,2146053..2146055, 2146062..2146064,2146125..2146127,2146131..2146133, 2146143..2146151,2146158..2146160,2146164..2146166, 2146170..2146172,2146284..2146286,2146290..2146295, 2146344..2146361,2146425..2146436,2146443..2146445, 2146476..2146478) /locus_tag="B565_1918" /note="active site" /db_xref="CDD:29807" misc_feature 2146122..2146133 /locus_tag="B565_1918" /note="motif 2; other site" /db_xref="CDD:29807" misc_feature 2146428..2146445 /locus_tag="B565_1918" /note="motif 3; other site" /db_xref="CDD:29807" gene 2146539..2148926 /locus_tag="B565_1919" /db_xref="GeneID:10487836" CDS 2146539..2148926 /locus_tag="B565_1919" /codon_start=1 /transl_table=11 /product="Phenylalanyl-tRNA synthetase subunit beta" /protein_id="YP_004392571.1" /db_xref="GI:330829619" /db_xref="GeneID:10487836" /translation="MKFSKSWVMEWVRTELSDNALAEQITMAGLEVDAVEAVAGQFNN VVVGEVVECAQHPDADKLRVTKVNVGEAELLDIVCGAPNCRQGLKVCVAKVGATLPGD FTIKKAKLRGQPSHGMLCSFSELGIDVEADGIIELPADAPIGTDIRDYLNLNDVSIDV DLTPNRADCLGIAGLAREIGVLNSVDVVEPTWAPAVATIDATFPIRVEAPADCPRYLG RVIKGLNLQAQSPLWMQEKLRRGGIRSIDAIVDITNYLLLEYGQPMHAFDLATLEGEL VVRRAHADEPMTLLDGNEVKLKETTLVIADAKGPACMAGIFGGNRTGVSETTTDILLE CAFFAPLSITGRARAYGLHTDSSHRFERGVDPELQAKVMDRATRLLLDICGGEAGPVI EVKSDAHLPKAAPIKLRRSKLDKVIGISVADAQVVEILTRLGMQVTVDADGWTALAPS WRFDIAIEEDLIEEVARIYGYNNIPNLKPAASLAMVEQAEGQVTLKRVRDLLVDRGFQ EAITYSFVDPKTQQTLFPQSDAIVLPNPISVEMSAMRVSLFPGLVQAVVYNQNRQQPR VRLFEQGLRFIKDESAENGIRQEPMLAGIITGNQSDEHWDIKTRAADFFDLKGDLEAV LDLTAEGATFTFERTEHSALHPGQSAAILRNGEIIGHIGVIHPSLEKKLGLKSRAVMF ELELDKLTPAKVPVAAEVSKFPANRRDIAVVVDRQVLAGDVLAVIKKVGGNQVVGINL FDVYQGAGMAEDKKSLAISLVLQDTQRTLEEKEIAETVDNVVRALGEELNASLRD" misc_feature 2146539..2148923 /locus_tag="B565_1919" /note="phenylalanyl-tRNA synthetase subunit beta; Reviewed; Region: pheT; PRK00629" /db_xref="CDD:179078" misc_feature 2146671..2146979 /locus_tag="B565_1919" /note="tRNA-binding-domain-containing prokaryotic phenylalanly tRNA synthetase (PheRS) beta chain. PheRS aminoacylate phenylalanine transfer RNAs (tRNAphe). PheRSs belong structurally to class II aminoacyl tRNA synthetases (aaRSs) but, as they aminoacylate...; Region: tRNA_bind_bactPheRS; cd02796" /db_xref="CDD:48399" misc_feature order(2146719..2146721,2146758..2146760,2146821..2146823, 2146860..2146862,2146881..2146883,2146890..2146892) /locus_tag="B565_1919" /note="putative tRNA-binding site [nucleotide binding]; other site" /db_xref="CDD:48399" misc_feature 2147175..2147693 /locus_tag="B565_1919" /note="B3/4 domain; Region: B3_4; cl11458" /db_xref="CDD:196242" misc_feature 2147748..2147951 /locus_tag="B565_1919" /note="tRNA synthetase B5 domain; Region: B5; cl08394" /db_xref="CDD:195731" misc_feature 2148006..2148605 /locus_tag="B565_1919" /note="Phenylalanyl-tRNA synthetase (PheRS) beta chain core domain. PheRS belongs to class II aminoacyl-tRNA synthetases (aaRS) based upon its structure. While class II aaRSs generally aminoacylate the 3'-OH ribose of the appropriate tRNA, PheRS is an...; Region: PheRS_beta_core; cd00769" /db_xref="CDD:29814" misc_feature order(2148012..2148017,2148036..2148038,2148045..2148047, 2148057..2148059,2148063..2148065,2148069..2148077, 2148129..2148140,2148171..2148173,2148213..2148215, 2148243..2148245,2148258..2148260,2148264..2148266, 2148270..2148272,2148300..2148302,2148396..2148398) /locus_tag="B565_1919" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29814" misc_feature 2148057..2148077 /locus_tag="B565_1919" /note="motif 1; other site" /db_xref="CDD:29814" misc_feature 2148189..2148200 /locus_tag="B565_1919" /note="motif 3; other site" /db_xref="CDD:29814" misc_feature 2148264..2148272 /locus_tag="B565_1919" /note="motif 2; other site" /db_xref="CDD:29814" misc_feature 2148639..2148920 /locus_tag="B565_1919" /note="Ferredoxin-fold anticodon binding domain; Region: FDX-ACB; pfam03147" /db_xref="CDD:190543" gene 2148930..2149226 /locus_tag="B565_1920" /db_xref="GeneID:10487837" CDS 2148930..2149226 /locus_tag="B565_1920" /codon_start=1 /transl_table=11 /product="integration host factor subunit alpha" /protein_id="YP_004392572.1" /db_xref="GI:330829620" /db_xref="GeneID:10487837" /translation="MALTKADIAEHLFTQLGMSKREAKDMVEAFFEEIRQALERGEQV KISGFGNFDLREKNQRPGRNPKTGEDIPISARRVVTFRPGQKLKARVENVEPNE" misc_feature 2148939..2149199 /locus_tag="B565_1920" /note="Integration host factor (IHF) and HU are small heterodimeric members of the DNABII protein family that bind and bend DNA, functioning as architectural factors in many cellular processes including transcription, site-specific recombination, and higher-...; Region: HU_IHF; cd00591" /db_xref="CDD:29683" misc_feature order(2148939..2148944,2148951..2148953,2148960..2148962, 2148972..2148974,2149014..2149016,2149023..2149028, 2149035..2149040,2149050..2149064,2149071..2149076, 2149089..2149091,2149155..2149160,2149170..2149172, 2149176..2149178,2149197..2149199) /locus_tag="B565_1920" /note="IHF dimer interface [polypeptide binding]; other site" /db_xref="CDD:29683" misc_feature order(2148939..2148947,2149011..2149013,2149056..2149058, 2149062..2149064,2149068..2149073,2149080..2149082, 2149092..2149094,2149098..2149103,2149107..2149109, 2149116..2149127,2149155..2149157,2149167..2149169, 2149173..2149175,2149182..2149184) /locus_tag="B565_1920" /note="IHF - DNA interface [nucleotide binding]; other site" /db_xref="CDD:29683" gene 2149263..2153231 /locus_tag="B565_1921" /db_xref="GeneID:10487838" CDS 2149263..2153231 /locus_tag="B565_1921" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392573.1" /db_xref="GI:330829621" /db_xref="GeneID:10487838" /translation="MTKFPVFLLGAVLALPLHAKPLQTTVLPLAPATQAYVNSLSQLS LCYPATLPPPYLMAEGGLLKDRLARLQELFPVPLVLKELPDWQTLRNGLAEGDCDIIP YVGTRKKAVEGMRLSRPMMETDAAILYKGENLKQARFLVYSVADSARLLHELYPQARI ISLKSGEKVYDALQSGKGDAYLGDYLQLRYLMREFPADGLRLRRLFGEDRIISYRLMM RDQPELANLVDTLIRHMPAGTIYTDLARYLDQGSLYVNQPHFSDTEQAWLSGRGRTIR LVVNPELMPYSGVNDLGEAKGWSADVLRWVTQETGLKYKLVPAASKAEAVEKLRRGEA DMMAGLPESPALTDQFIFSRTISTNRFALISKRKLAADRITQLKRQRILVPESLYDPS LLALLGDQEWLRTDGIEQGLAAIKQGKADAMLSELYQLQYPQRTNLLEGLDIEELEDR FSLGFAINKSQTELAGVMDRNLMALTSTQIDELNQRWRRLLVVQQPGVSYAAWFGSIA MALLISGIVIGGIWRSRQQLAREVAQRHAAEKALAIESELRETMFQALPVPVYLRNSQ GKVIKSNKQGRRLALRYSQQLMLPPVQPQKSEGELVLGDQVFAYAQHPLRLDKQAPAT DLIALSDISVLREQARFLRQAERRLRALTNTVPGVVLQFMFERGRVGGIEFISRGCYE LLGLASQQIRREPKRVLTMLEREDRRRVSREMFAMLQAGKPFAFTMRYHHPTKGLRWL QLYGRGRSQPQGWRIYAVMQDATARVEQDQALQHSHEQAQQAVLAKGRFLAAISHEIR TPMNAMLGLLEWLASTPLSREQDSALARVRQAGDELLGLLNDVLDFSRNENSKLSLSP QPTDFAELCEHVVAVHWTKARAKGLQLRLKLDPALPALQTLDPHRVRQVLHNLLSNAI KFSLRGEVVLWAEVVASTLRFGVDDQGPGITAKMRTTLFMPFEQFAVEGQLRAPGTGL GLAICKQLIEQMGGLIDVEGRAGGGSRFYCELPLKRVQQEPDWLPNVRQLALSLPHDE AQALSPWLSRLGIATVSNAVDTLQAEVDEKGLYYWAWQGESWVPGTIITLLQPRLTPD QPVAGTQPGLGMRVLLVEDHDVNRELISLQLGQLGASVITAANGQLALEMLAQQEVDF VLTDLQMPVMNGAELCRQLRQSARWARLPVYVITADLSDQAARELQSCGCDGHLDKPV ALKELATLLRHIAKEGSNVVAPTPVASLLTDELAALYLKATRDDLAELERCSTEEDEV GVNAALHKLKGAARMVGATAMVAVIEEWQQASHPMLQARLNRALDEFSQQFSKRAQDD HH" misc_feature 2149263..2150036 /locus_tag="B565_1921" /note="ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:31176" misc_feature <2149515..2150000 /locus_tag="B565_1921" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature order(2149518..2149520,2149581..2149583,2149698..2149700, 2149812..2149814) /locus_tag="B565_1921" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(2149761..2149763,2149773..2149775,2149791..2149793) /locus_tag="B565_1921" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 2149890..2149907 /locus_tag="B565_1921" /note="hinge residues; other site" /db_xref="CDD:29040" misc_feature 2150085..2150723 /locus_tag="B565_1921" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature 2150085..2150723 /locus_tag="B565_1921" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature order(2150109..2150111,2150223..2150225,2150298..2150300, 2150424..2150426,2150538..2150540) /locus_tag="B565_1921" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(2150487..2150489,2150499..2150501,2150517..2150519) /locus_tag="B565_1921" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 2150613..2150630 /locus_tag="B565_1921" /note="hinge residues; other site" /db_xref="CDD:29040" misc_feature <2150910..2152280 /locus_tag="B565_1921" /note="Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]; Region: COG4191" /db_xref="CDD:33926" misc_feature 2151615..2151800 /locus_tag="B565_1921" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature order(2151627..2151629,2151639..2151641,2151651..2151653, 2151660..2151662,2151672..2151674,2151681..2151683, 2151729..2151731,2151741..2151743,2151750..2151752, 2151762..2151764,2151771..2151773,2151783..2151785) /locus_tag="B565_1921" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature 2151645..2151647 /locus_tag="B565_1921" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature 2151966..2152274 /locus_tag="B565_1921" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(2151984..2151986,2151996..2151998,2152005..2152007, 2152071..2152073,2152077..2152079,2152083..2152085, 2152089..2152094,2152173..2152184,2152230..2152232, 2152236..2152238,2152251..2152256,2152260..2152262) /locus_tag="B565_1921" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 2151996..2151998 /locus_tag="B565_1921" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(2152083..2152085,2152089..2152091,2152173..2152175, 2152179..2152181) /locus_tag="B565_1921" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature 2152566..2152904 /locus_tag="B565_1921" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature 2152569..2152913 /locus_tag="B565_1921" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(2152578..2152583,2152710..2152712,2152734..2152736, 2152800..2152802,2152857..2152859,2152866..2152871) /locus_tag="B565_1921" /note="active site" /db_xref="CDD:29071" misc_feature 2152710..2152712 /locus_tag="B565_1921" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(2152719..2152724,2152728..2152736) /locus_tag="B565_1921" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 2152866..2152874 /locus_tag="B565_1921" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature <2152968..2153189 /locus_tag="B565_1921" /note="Histidine Phosphotransfer domain, involved in signalling through a two part component systems in which an autophosphorylating histidine protein kinase serves as a phosphoryl donor to a response regulator protein; the response regulator protein is...; Region: HPT; cl00086" /db_xref="CDD:193652" gene 2153218..2154462 /locus_tag="B565_1922" /db_xref="GeneID:10487839" CDS 2153218..2154462 /locus_tag="B565_1922" /codon_start=1 /transl_table=11 /product="two-component system response regulator" /protein_id="YP_004392574.1" /db_xref="GI:330829622" /db_xref="GeneID:10487839" /translation="MIITDEELLALLDSEEHEAAGFCPIVLYALDSTAHELASTMTLP SYVTLHRTRPDACWQWEGLFAAGAIALYDPAAHQQADYFPQLQQHEGIYAIGEDWLGG LAASYRNWCNWLAANKVLLLEDHPFQGMQLQQTIAGLGLSCQWVQDESACLAALSAGD ISLLVCDLSLVEQDAISLLMNQPQLQEAGLPIVLLSAHEQTLIDGARRLLHDAGFNIL AALAKPLDCDELLRLLRRLYLGPLRQQRLSGQRRSIRRWQGEVQGQLGLLSSPATPHP VWLAVTGLPSRWEALKDWLTEQSRTPSELTLLIHRRDHLLGNADRFALVLQASLAGSK LALLLDNSQHLPFDLLERLPLQALLLGQGILPEMESLTCDSLLGRFMARVRELGIAVY LDDPYNLLDVEVWRERGMTGRW" misc_feature 2153572..2153904 /locus_tag="B565_1922" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" gene 2154466..2155107 /locus_tag="B565_1923" /db_xref="GeneID:10487840" CDS 2154466..2155107 /locus_tag="B565_1923" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004392575.1" /db_xref="GI:330829623" /db_xref="GeneID:10487840" /translation="MPRYLCWPMHRERLGKGLEGWPHPVSRAALPLAMEVFGVPCLLR ELHGVAPARMLAAYDALSEESIYLRFMRPKRTPPPEQVAQFLNYHPEQQISLLLTDLA GEPLAQAQSIRRRLHPDRAEFSCIVADHFQHKGAGRRILLALALLARADGIREWTAEV LAQNRPMLTLLKRLGLPLTLVTGREMVFVRLDLSVLDAWLPAPPAAPLKTKGE" gene 2155168..2155941 /locus_tag="B565_1924" /db_xref="GeneID:10487841" CDS 2155168..2155941 /locus_tag="B565_1924" /codon_start=1 /transl_table=11 /product="NAD-dependent protein deacetylase, Sir2 family" /protein_id="YP_004392576.1" /db_xref="GI:330829624" /db_xref="GeneID:10487841" /translation="MAQSYKHIVILTGAGISAESGIKTFRACDGLWEEHKVEDVATPE GYARDPELVLRFYNSRRKQLQQPQVHPNPAHYALARLERLLPGTVTLVTQNIDNLHES AGSKNLIHMHGELLKARCPESGQVIEWRGDLHQDELCSCCQFPQPMRPHVVWFGEMPL GLDRIYSALAQCDLFISIGTSGAVYPAAGFVHEAGLNGAHTIELNLEPSEVGSQFDEK RYGPASLLVPAYVDELLEACGIHQPRQVEGHNWMEMRGP" misc_feature 2155183..2155860 /locus_tag="B565_1924" /note="SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E. coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes...; Region: SIRT5_Af1_CobB; cd01412" /db_xref="CDD:29380" misc_feature order(2155210..2155212,2155216..2155221,2155240..2155245, 2155390..2155392,2155447..2155452,2155456..2155458, 2155501..2155503,2155702..2155704,2155717..2155719, 2155783..2155788,2155831..2155833) /locus_tag="B565_1924" /note="NAD+ binding site [chemical binding]; other site" /db_xref="CDD:29380" misc_feature order(2155453..2155455,2155501..2155503,2155624..2155626, 2155630..2155641,2155714..2155722) /locus_tag="B565_1924" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:29380" misc_feature order(2155525..2155527,2155534..2155536,2155588..2155590, 2155597..2155599) /locus_tag="B565_1924" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:29380" gene 2156072..2156509 /locus_tag="B565_1925" /db_xref="GeneID:10487842" CDS 2156072..2156509 /locus_tag="B565_1925" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392577.1" /db_xref="GI:330829625" /db_xref="GeneID:10487842" /translation="MLASASASASIPLMTLVLPDGQQVTLDEAALSALPQTEFTTTTP WTQGAHYYRGPTLSAVLAAQGIPDARKIAVSALNGYQQVVDLALFDGVPLTLVRQEDG KPLTRRNKGPLWLLIPFTTYPKLDVPAIHNCMVWQVTRIEIVD" misc_feature 2156105..2156500 /locus_tag="B565_1925" /note="Sulfite oxidase (SO) family, molybdopterin binding domain. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). SO catalyzes the...; Region: SO_family_Moco; cl00199" /db_xref="CDD:185822" gene 2156509..2158197 /locus_tag="B565_1926" /db_xref="GeneID:10487843" CDS 2156509..2158197 /locus_tag="B565_1926" /codon_start=1 /transl_table=11 /product="GGDEF family protein" /protein_id="YP_004392578.1" /db_xref="GI:330829626" /db_xref="GeneID:10487843" /translation="MGLSRQNLLLVAVSLLFLLSSGSSLYLQYRQEQLVDTFYRNVHW NISQVMLESQRFLYDLQLYRAGRLSMETLSLDYDLLWNRLDIFLISSETAEMRQRYGL GKVLATLFEQIKQLEPQMEAGALREGAELARLQEAIASQTRLIEQIGDQILSGQEREH SVSQIRNSLFWLQMWQLILLLTGGALVAALIRANLANRRLALLDPLTQLGNRRALQEQ LSRALHADDVSALVVLDLKRFKQVNDLLGYQVGDRLLQMVANKLQQAHGSHAYRLGGD EFAVVLTKADDALETAIHELVDLLHFEFVTRECSFDLACRLGVAKAQQQDAARLLDQA ILALNQAKRSQEGAISWFEPAMLQQLQLSQQQLHQLREWLAGREPAPLRVALQALTDG QGNEMWQLALEWREQGVPCHMRWLQECGVLGPVLARVLQAHEAQYADGRALLVPLDNQ AQLTHLLAYLPEASRTPLVLLVPMLQQDSALLAGLRQQGCTLALREIGSTTSAQLAAG WPVRYWLPQGDEDGELLQPLARRLGLVPLQVLAARETRSLAWGQKAVLHRQETK" misc_feature 2157118..>2157465 /locus_tag="B565_1926" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(2157211..2157213,2157334..2157336) /locus_tag="B565_1926" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(2157226..2157228,2157235..2157240,2157250..2157252, 2157262..2157264,2157322..2157324,2157328..2157339) /locus_tag="B565_1926" /note="active site" /db_xref="CDD:143635" misc_feature order(2157310..2157312,2157391..2157393) /locus_tag="B565_1926" /note="I-site; other site" /db_xref="CDD:143635" gene complement(2158246..2159250) /locus_tag="B565_1927" /db_xref="GeneID:10487844" CDS complement(2158246..2159250) /locus_tag="B565_1927" /codon_start=1 /transl_table=11 /product="lacI family transcriptional regulator" /protein_id="YP_004392579.1" /db_xref="GI:330829627" /db_xref="GeneID:10487844" /translation="MANIKEVAARAQVSTTTVSHVINETRFVAEETRERVFAAMRELN YAPSLVARSLKVKETNSIGMLVTTSSNPFFAEVVRGVERYCFEQGYNLMLGNTEGQAE TALSYLKMMLRKRVDGLLIMCSEGQQEVFNQLDWLKSLPVVVMDWGLVSEDVDLIADN SFHGGYLATRHLIELGHTAIGCITGPHSRAPANQRQAGFEQALQEAGLIVNQEWIQEG DFDCASGHQAMTRLLALPERPTALFVCNDMMAMGAISAAHQAGLVIPRDLSIVGYDNV ALAEFMSPPLTTVNQPKEELGRLAVTRLLARINGEAVENHLITVDPDLVIRQSCAPRP " misc_feature complement(2158249..2159250) /locus_tag="B565_1927" /note="DNA-binding transcriptional repressor PurR; Provisional; Region: PRK10703" /db_xref="CDD:182662" misc_feature complement(2159086..2159238) /locus_tag="B565_1927" /note="Helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators; Region: HTH_LacI; cd01392" /db_xref="CDD:143331" misc_feature complement(order(2159086..2159091,2159095..2159100, 2159107..2159109,2159116..2159118,2159155..2159157, 2159164..2159169,2159182..2159184,2159191..2159196, 2159200..2159214,2159236..2159238)) /locus_tag="B565_1927" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature complement(2159089..2159118) /locus_tag="B565_1927" /note="domain linker motif; other site" /db_xref="CDD:143331" misc_feature complement(2158264..2159070) /locus_tag="B565_1927" /note="Ligand-binding domain of purine repressor, PurR, which functions as the master regulatory protein of de novo purine nucleotide biosynthesis in Escherichia coli; Region: PBP1_PurR; cd06275" /db_xref="CDD:107270" misc_feature complement(order(2158267..2158269,2158408..2158413, 2158417..2158419,2158474..2158476,2158486..2158488, 2158498..2158500,2158582..2158584,2158909..2158911, 2158930..2158932,2158969..2158977,2158981..2158983, 2158993..2158995,2159041..2159043)) /locus_tag="B565_1927" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:107270" misc_feature complement(order(2158429..2158431,2158591..2158593, 2158666..2158668,2158678..2158680,2158684..2158686, 2159032..2159034)) /locus_tag="B565_1927" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:107270" gene complement(2159250..2160182) /locus_tag="B565_1928" /db_xref="GeneID:10487845" CDS complement(2159250..2160182) /locus_tag="B565_1928" /codon_start=1 /transl_table=11 /product="ribokinase" /protein_id="YP_004392580.1" /db_xref="GI:330829628" /db_xref="GeneID:10487845" /translation="MNRLVVLGSVNADHVLRVPHFPRPGETLTGHSYQVVPGGKGANQ AVAAARLGAPVSFIARIGDDAIGHQMKSGFAKDGIDVSAVELDPKLPTGIAIIYVSDE GENSIGISAEANGAITPAVVKNHEAMIADAHTLLLQLEVPLESVHEAARLARAHGTRV VLNPAPARPLSAELLALVDLITPNQTEAELLTGVKVTDEASAHEAAARFHQMGIADVM ITLGSQGVYCSNAQQQQLIPGFRVKAVDTTAAGDTFNGALLAAELAGADFHSAVRFAH GAAALSVTRFGAQSSIPSKQEVDTFLLEQTAQGH" misc_feature complement(2159301..2160176) /locus_tag="B565_1928" /note="Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of...; Region: ribokinase; cd01174" /db_xref="CDD:29358" misc_feature complement(order(2159319..2159321,2159427..2159429, 2159436..2159441,2159763..2159765,2159856..2159858, 2159862..2159864,2159892..2159894,2159898..2159900, 2160054..2160056,2160063..2160071,2160144..2160146, 2160150..2160152)) /locus_tag="B565_1928" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:29358" misc_feature complement(2159277..2160146) /locus_tag="B565_1928" /note="Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]; Region: FruK; COG1105" /db_xref="CDD:31302" misc_feature complement(order(2159685..2159687,2159850..2159873, 2159889..2159897,2159901..2159903,2160063..2160065, 2160102..2160122,2160135..2160137,2160141..2160143)) /locus_tag="B565_1928" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29358" misc_feature complement(order(2159334..2159336,2159343..2159348, 2159355..2159357,2159421..2159423,2159430..2159435, 2159442..2159444,2159451..2159453,2159469..2159471, 2159508..2159510,2159517..2159525,2159631..2159633)) /locus_tag="B565_1928" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29358" gene complement(2160291..2161169) /locus_tag="B565_1929" /db_xref="GeneID:10487846" CDS complement(2160291..2161169) /locus_tag="B565_1929" /codon_start=1 /transl_table=11 /product="ribose ABC transporter periplasmic ribose-binding protein" /protein_id="YP_004392581.1" /db_xref="GI:330829629" /db_xref="GeneID:10487846" /translation="MMKKLNTLLAAAIMSVLGTAHAADQTLAMVVSTLNNPFFVTMKE GAEAKAKELGYELVVLDSQNDPAKELSNMEDLTVRKVGAILINPTDSEAVGNAIRLAN RANIPVLTLDRGAAQGEVKAHIASDNVAGGKLAGDFITEKLGTGAKVIQLEGIAGTSA ARDRGEGFALAVAANKLQVLASQPADFDRTKGLNVMENLLAAHPTVQAVFAQNDEMAL GAIRAVQAAGKEVMIVGFDGTDDGKAAVAKGKLAATVAQQPALIGAIGVETADKVLKG QPVEKSIPVPLQVVSK" misc_feature complement(2160294..2161169) /locus_tag="B565_1929" /note="D-ribose transporter subunit RbsB; Provisional; Region: PRK10653" /db_xref="CDD:182620" misc_feature complement(2160300..2161094) /locus_tag="B565_1929" /note="Periplasmic sugar-binding domain of the thermophilic Thermoanaerobacter tengcongensis ribose binding protein (ttRBP) and its mesophilic homologs; Region: PBP1_ribose_binding; cd06323" /db_xref="CDD:107318" misc_feature complement(order(2160399..2160401,2160459..2160461, 2160531..2160533,2160609..2160611,2160678..2160680, 2160690..2160692,2160831..2160836,2160909..2160911, 2161053..2161058,2161062..2161064)) /locus_tag="B565_1929" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:107318" misc_feature complement(order(2160567..2160569,2160621..2160626, 2160633..2160638,2160672..2160674,2160684..2160686)) /locus_tag="B565_1929" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:107318" gene complement(2161197..2162165) /locus_tag="B565_1930" /db_xref="GeneID:10487847" CDS complement(2161197..2162165) /locus_tag="B565_1930" /codon_start=1 /transl_table=11 /product="ribose ABC transporter permease" /protein_id="YP_004392582.1" /db_xref="GI:330829630" /db_xref="GeneID:10487847" /translation="MTTQTLSRRGVMSKAWWIENKSLVALLVLIGVVSALSPNFFTAD NLLNILRQTSVNAIMAVGMTLVILTAGIDLSVGSVLALCGALAATMVAMELPIWLVVP LTLGAGALLGGVSGLIIAKGKVQAFIATLVTMTALRGITMVYTEGRPISTGFSDGADH FAWLGTGYLFGLPVPIWLMAIVFLLAWFMLNHTRLGRYIYALGGNESATRLSGINVDR VKLAVYGLCGALSALAGLIVTSRLSSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIM GTLIGALIIGFLNNALNLLDVSSYYQMIAKASVILLAVMIDNKSNR" misc_feature complement(2161215..2162009) /locus_tag="B565_1930" /note="Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the TM of a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of the monosaccharide arabinose. This group...; Region: TM_PBP1_transp_AraH_like; cd06579" /db_xref="CDD:119321" misc_feature complement(2161491..2161547) /locus_tag="B565_1930" /note="TM-ABC transporter signature motif; other site" /db_xref="CDD:119321" gene complement(2162162..2163691) /locus_tag="B565_1931" /db_xref="GeneID:10487848" CDS complement(2162162..2163691) /locus_tag="B565_1931" /codon_start=1 /transl_table=11 /product="ribose ABC transporter ATP-binding protein" /protein_id="YP_004392583.1" /db_xref="GI:330829631" /db_xref="GeneID:10487848" /translation="MSTTSPLSPILELTGIVKTFPGVRALDEAGLRVYPGQVMALLGE NGAGKSTLMKVLTGIYQADAGSVSYRGQPVHFKGPRDSQDQGISIIHQELNLLPELSI AANIFLGREPRTRFGNIDHPQLRERASSLLGRLGVKHGPDTRLGDLSIGEQQMVEIAK ALSFDASVIIMDEPTDALTDTETEQLFAVIRELRQQGCGIVYISHRLKEIFQICDRVT VLRDGKWIGEKAVSDLDEDKIIEMMVGRRLEEQYPRLERELGPVSLQVKALAGPGVRG VSFSLRQGEILGFSGLMGSGRTELMKLIYGASPISAGEVQVDGHALVPKSPADGLAAG IAYISEDRKGDGLVLELSVRENMSLCALDEFISNGKIDGKAERQAVSDYVRLFNIKTP SQDQLIKLLSGGNQQKVAIAKGLLTRPKVLILDEPTRGVDVGAKKEIYQLINQFKNEG MSIILVSSEMPEVLGMSDRIMVMHEGRISAEFNTRDANQEKLMAAAVGKQWQAEQEAS Q" misc_feature complement(2162174..2163670) /locus_tag="B565_1931" /note="D-ribose transporter ATP binding protein; Provisional; Region: PRK10762" /db_xref="CDD:182707" misc_feature complement(2163008..2163661) /locus_tag="B565_1931" /note="This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and...; Region: ABC_Carb_Monos_I; cd03216" /db_xref="CDD:72975" misc_feature complement(2163542..2163565) /locus_tag="B565_1931" /note="Walker A/P-loop; other site" /db_xref="CDD:72975" misc_feature complement(order(2163077..2163079,2163173..2163178, 2163416..2163418,2163539..2163547,2163551..2163556)) /locus_tag="B565_1931" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72975" misc_feature complement(2163416..2163427) /locus_tag="B565_1931" /note="Q-loop/lid; other site" /db_xref="CDD:72975" misc_feature complement(order(2163221..2163238,2163383..2163394)) /locus_tag="B565_1931" /note="ABC transporter signature motif; other site" /db_xref="CDD:72975" misc_feature complement(2163173..2163190) /locus_tag="B565_1931" /note="Walker B; other site" /db_xref="CDD:72975" misc_feature complement(2163155..2163166) /locus_tag="B565_1931" /note="D-loop; other site" /db_xref="CDD:72975" misc_feature complement(2163071..2163091) /locus_tag="B565_1931" /note="H-loop/switch region; other site" /db_xref="CDD:72975" misc_feature complement(2162258..2162914) /locus_tag="B565_1931" /note="This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (; Region: ABC_Carb_Monos_II; cd03215" /db_xref="CDD:72974" gene complement(2163728..2164147) /locus_tag="B565_1932" /db_xref="GeneID:10487849" CDS complement(2163728..2164147) /locus_tag="B565_1932" /codon_start=1 /transl_table=11 /product="D-ribose pyranase" /protein_id="YP_004392584.1" /db_xref="GI:330829632" /db_xref="GeneID:10487849" /translation="MKRGVLLNAPLSALVAQMGHTDEITVCDAGLPIPAGPERIDLAL MAGTPSLETVLTALLTDLVVEKVIMASEIKQISPAAHQALVDQLEAHAAAQGKPITIE YCLHEEFKTRSRQSKAIVRSGEVTPYANLILCAGVAF" misc_feature complement(2163731..2164147) /locus_tag="B565_1932" /note="RbsD / FucU transport protein family; Region: RbsD_FucU; cl00809" /db_xref="CDD:193943" gene complement(2164381..2164998) /locus_tag="B565_1933" /db_xref="GeneID:10487850" CDS complement(2164381..2164998) /locus_tag="B565_1933" /codon_start=1 /transl_table=11 /product="glutathione S-transferase domain-containing protein" /protein_id="YP_004392585.1" /db_xref="GI:330829633" /db_xref="GeneID:10487850" /translation="MSDLTLYFAPGTCAMAVQIALLEANAPFQPRLVNLAAGEQRDPS YLAINPKGRVPALVTEQGTLTETPALLLYVAQRFPDAKLAPLDNPFLLARMQEVNSFL ASTVHVSHAHGRRGSRWADDEQAIAAMQQKVASNMRDGFAQIEQHYLAGPWVLGEQFS VADIYLFVVAGWLKSDGVEISEFPKVAEHYQRMLSRPAIAKAVAN" misc_feature complement(2164384..2164989) /locus_tag="B565_1933" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: Gst; COG0625" /db_xref="CDD:30970" misc_feature complement(2164762..2164989) /locus_tag="B565_1933" /note="GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens...; Region: GST_N_Beta; cd03057" /db_xref="CDD:48606" misc_feature complement(order(2164771..2164773,2164783..2164785, 2164930..2164935,2164945..2164947,2164951..2164953, 2164966..2164971)) /locus_tag="B565_1933" /note="C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48606" misc_feature complement(order(2164798..2164803,2164837..2164842, 2164960..2164962)) /locus_tag="B565_1933" /note="GSH binding site (G-site) [chemical binding]; other site" /db_xref="CDD:48606" misc_feature complement(order(2164771..2164773,2164780..2164782, 2164795..2164797,2164801..2164806,2164840..2164842)) /locus_tag="B565_1933" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48606" misc_feature complement(2164393..2164722) /locus_tag="B565_1933" /note="GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens...; Region: GST_C_Beta; cd03188" /db_xref="CDD:48115" misc_feature complement(order(2164591..2164593,2164603..2164605, 2164612..2164614,2164648..2164650,2164675..2164677, 2164687..2164689,2164699..2164701,2164708..2164710, 2164717..2164722)) /locus_tag="B565_1933" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48115" misc_feature complement(order(2164474..2164476,2164483..2164485, 2164492..2164494,2164657..2164659,2164663..2164668, 2164675..2164680,2164690..2164692)) /locus_tag="B565_1933" /note="substrate binding pocket (H-site) [chemical binding]; other site" /db_xref="CDD:48115" misc_feature complement(order(2164393..2164395,2164405..2164407, 2164411..2164413,2164483..2164485,2164495..2164497, 2164516..2164518,2164678..2164680)) /locus_tag="B565_1933" /note="N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48115" gene complement(2165299..2165481) /locus_tag="B565_1934" /db_xref="GeneID:10487851" CDS complement(2165299..2165481) /locus_tag="B565_1934" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392586.1" /db_xref="GI:330829634" /db_xref="GeneID:10487851" /translation="MLDANKEYTEIIKSLIHDLYNEAVMKDGVAKNVGAYRKALEEQS QKILEKAWSDIKSELT" gene complement(2166336..2167403) /locus_tag="B565_1935" /db_xref="GeneID:10487852" CDS complement(2166336..2167403) /locus_tag="B565_1935" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter periplasmic spermidine putrescine-binding protein PotD" /protein_id="YP_004392587.1" /db_xref="GI:330829635" /db_xref="GeneID:10487852" /translation="MTIQHKAGALLAAALTLTTPLLSQSAHAADDKVVYFYNWSEYVP DGLLEQFQQETGIKVIYSTYESNETLYAKLKTHGDGYDVVVPSTYFISKMAKEGMLQP LDRAQLPNFKHLDPTLLNHEYDPDNRYSIPYIWGATGIGTNTDIIEQPVTSWKQLWAP EWKESLLLMDDAREVFHIALVQLGYSPNTQDKAQIAEAFEYLKKLMPNVKAFNSDNPA DPFIAGEVNIGMLWNGSAYGAQREYPSIQMTYPEEGAVLWMDNLAIPAKAKHVKEAHA LINFLMRPDVAAKVAEAIGYPTPVKDAIPLLTPAFRNNPMVFPSDEIKRKGEFQSDVG DASRLYEQYFLQLKAMVAKAG" misc_feature complement(2166351..2167331) /locus_tag="B565_1935" /note="Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]; Region: PotD; COG0687" /db_xref="CDD:31031" misc_feature complement(2166357..2167331) /locus_tag="B565_1935" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(2167485..2168255) /locus_tag="B565_1936" /db_xref="GeneID:10487853" CDS complement(2167485..2168255) /locus_tag="B565_1936" /codon_start=1 /transl_table=11 /product="spermidine putrescine ABC transporter permease PotC" /protein_id="YP_004392588.1" /db_xref="GI:330829636" /db_xref="GeneID:10487853" /translation="MMRALKALFLLLVFGYLYVPIGVLIANSFNLSKYGIDWRGFTLG WYEKLFASASLMQAAQHSLTIAALTATAATLIGTLTAVALFRYRFRGKQYVSGMLFVV MMSPDIVMAISLLTLFVVTGIALGFWSLLIAHITFCLPFVVITVYSRLCGFDVRMLEA ARDLGAGEWIILRRIILPLALPAVMAGWLLSFTLSLDDVVVSSFVTGPAYEILPLKIY SMVKVGVSPEVNALATLMLVASLGMVLLAQLLLRKRQG" misc_feature complement(2167488..2168255) /locus_tag="B565_1936" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cl00427" /db_xref="CDD:193813" gene complement(2168252..2169139) /locus_tag="B565_1937" /db_xref="GeneID:10487854" CDS complement(2168252..2169139) /locus_tag="B565_1937" /codon_start=1 /transl_table=11 /product="spermidine putrescine ABC transporter permease PotB" /protein_id="YP_004392589.1" /db_xref="GI:330829637" /db_xref="GeneID:10487854" /translation="MSLTNLRVPHSFAHNGFRNGAIALILGWLTLFVFLPNLMIIGVS FLTRDESELIAPLFTLSNYGRLLDPLYFEVLLHSLWLALLATSICLLVGYPFAWLLAH LPARIRPLLLFLVVVPFWTNSLIRTYALKVLLGTRGLINGWLLDLGLIERPLQMMYTE VAVIIGLVYVLLPFMVLPLYSSIEKLDGRLLEAARDLGANGWQRLVRIILPLTLPGII AGCLLVFLPAMGMFYVSDLLGGAKHLLIGNLIKTQFLNSRDWPFGAAISVMLTVLMAL LVYCYWRAGKLLSKKGELA" misc_feature complement(2168261..2169109) /locus_tag="B565_1937" /note="ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]; Region: PotC; COG1177" /db_xref="CDD:31370" misc_feature complement(2168318..2168887) /locus_tag="B565_1937" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(2168318..2168320,2168327..2168332, 2168339..2168344,2168348..2168353,2168360..2168365, 2168393..2168398,2168429..2168434,2168441..2168452, 2168471..2168473,2168480..2168485,2168525..2168527, 2168576..2168578,2168585..2168590,2168600..2168602, 2168606..2168611,2168618..2168620,2168627..2168629, 2168633..2168638,2168747..2168749,2168753..2168758, 2168765..2168794,2168798..2168809,2168837..2168839, 2168852..2168857,2168864..2168869)) /locus_tag="B565_1937" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(2168435..2168452,2168747..2168791)) /locus_tag="B565_1937" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature complement(order(2168363..2168365,2168393..2168395, 2168402..2168404,2168432..2168434,2168651..2168653, 2168747..2168749)) /locus_tag="B565_1937" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature complement(order(2168504..2168506,2168516..2168521, 2168537..2168575)) /locus_tag="B565_1937" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene complement(2169126..2170229) /locus_tag="B565_1938" /db_xref="GeneID:10487855" CDS complement(2169126..2170229) /locus_tag="B565_1938" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter ATPase" /protein_id="YP_004392590.1" /db_xref="GI:330829638" /db_xref="GeneID:10487855" /translation="MMNNPQVIVALNKISKKYDGKVILSDLDLEIYDGEFLTLLGPSG CGKTTLLRLLAGLESVDGGTIHLAGDEITHIPAEHRHINTVFQSYALFPHMTVFENVA FGLEMQKVPASEIRQRVEETLAMVQLTELANRRPDQLSGGQQQRVAIARAVVNKPRLL LLDESLSALDYKLRKQMQSELKALQRRLGITFVFVTHDQEEALTMSDRILVMEGGKII QRGTPRDIYESPANLFVARFIGEINVMDGKLISQREPGIWQAEVEGRECLLHTTLPFQ PDDKVLVLLRPEDLRILDQDDDQSGALRGNIRERNYKGATLDSVIELESGKQLLISEF FDEDDPDFDYRLGQEVAIHWVDSWEVVLPYEPH" misc_feature complement(2169129..2170229) /locus_tag="B565_1938" /note="putrescine/spermidine ABC transporter ATPase protein; Reviewed; Region: potA; PRK09452" /db_xref="CDD:181868" misc_feature complement(2169510..2170205) /locus_tag="B565_1938" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(2170086..2170109) /locus_tag="B565_1938" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature complement(order(2169639..2169641,2169738..2169743, 2169969..2169971,2170083..2170091,2170095..2170100)) /locus_tag="B565_1938" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature complement(2169969..2169980) /locus_tag="B565_1938" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature complement(2169786..2169815) /locus_tag="B565_1938" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature complement(2169738..2169755) /locus_tag="B565_1938" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature complement(2169720..2169731) /locus_tag="B565_1938" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature complement(2169633..2169653) /locus_tag="B565_1938" /note="H-loop/switch region; other site" /db_xref="CDD:72971" misc_feature complement(2169144..2169383) /locus_tag="B565_1938" /note="TOBE domain; Region: TOBE_2; cl01440" /db_xref="CDD:163979" gene 2170431..2171168 /locus_tag="B565_1939" /db_xref="GeneID:10487856" CDS 2170431..2171168 /locus_tag="B565_1939" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392591.1" /db_xref="GI:330829639" /db_xref="GeneID:10487856" /translation="MRIGGSLEQSLNQGYRLDLKGVIQEGWQQTRRTGFGLLLAIVGV TAIWILLSNVLLLPYLGDDSQMNVAMVLSLLMTVVMAPMTSSLDMLGLQQSVGVRARA NQVFDFFRHFVRLGMLSLLGSLLTSLFGPLFDLLGLPAVLSFIPSALIGMGLLFTVPL VLERGLTPPQAILVSLKLFARGWPSIVLFHGVMTALFFLALIPMGLGLIWVAPLYFNC KGILYRDLCGVGVEVNEVTEGPNHFNA" gene 2171185..2171871 /locus_tag="B565_1940" /db_xref="GeneID:10487857" CDS 2171185..2171871 /locus_tag="B565_1940" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392592.1" /db_xref="GI:330829640" /db_xref="GeneID:10487857" /translation="MTRRYGVTKAVRQSLLATLLLPGLALAEPVLDLQYSTFYSQMKT FAKGEFGHARLGFYLTDPQNGQRCGLTFARVATDSKEVAGEVTIDSELRLPFDEDLNL DKGIVTVGLKEEHATCDMTVQVMADAPNGPELPVAELAARQQQMQSLLDKMAGMVGKH FLPKMEGVRITLVQQSGTAYLIDGARQEALPWQEGHLLLSNEQLAAFAAGQLRLQGDV LRLTPWLHKG" misc_feature 2171275..2171700 /locus_tag="B565_1940" /note="Protein of unknown function (DUF2987); Region: DUF2987; pfam11205" /db_xref="CDD:151647" gene complement(2171974..2172882) /locus_tag="B565_1941" /db_xref="GeneID:10487858" CDS complement(2171974..2172882) /locus_tag="B565_1941" /codon_start=1 /transl_table=11 /product="PP-loop superfamily ATPase MesJ" /protein_id="YP_004392593.1" /db_xref="GI:330829641" /db_xref="GeneID:10487858" /translation="MLEELNAKEKYSFNKLQKRLRRNVGQAIADFNMIEEGDKVMVCL SGGKDSFGMLDILMSLKASAPIHFDLVAVNLDQKQPGFPVHVLPEYLDSLGIEYKIVE EDTYSIVKEKVPEGKTTCSLCSRLRRGILYRTAQELGCTKIALGHHRDDILETLFLNM FYGGKLKSMPPKLVSDDGKNVVIRPLAYCKEKDLIRYADVKAFPIIPCNLCGSQENLQ RQAIKQMMQDWDRRFPGRIETMFTAIQDVIPSHLLDHKLFDFKSINRDSGIIDGGDKA FDPPEMPKAPLLDIDEMDMLDVIEVR" misc_feature complement(2172085..2172858) /locus_tag="B565_1941" /note="tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional; Region: PRK10696" /db_xref="CDD:182655" misc_feature complement(2172241..2172768) /locus_tag="B565_1941" /note="This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This...; Region: Alpha_ANH_like_II; cd01993" /db_xref="CDD:30180" misc_feature complement(order(2172655..2172657,2172661..2172663, 2172733..2172744,2172748..2172756)) /locus_tag="B565_1941" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30180" gene complement(2172957..2173904) /locus_tag="B565_1942" /db_xref="GeneID:10487859" CDS complement(2172957..2173904) /locus_tag="B565_1942" /codon_start=1 /transl_table=11 /product="Universal stress family protein" /protein_id="YP_004392594.1" /db_xref="GI:330829642" /db_xref="GeneID:10487859" /translation="MVKYQNILVVINPEEERQIALERAVKVAELDENAHLTLLLTIYD FSYEMTAMLSVDERQEMRDGVISQRREWLDEILIPYRAQGIECEVKVVWHNRPFECVI QEVLEQRHDLVVKATHHHSFLQTFIFTPTDWHLLRKCPCPVLLVKEGHWQRGGNIIAA INCSSDDPDQKLLNERITQEGSDIAELLVSNLYLVNTYPGTPVNVAIELPEFDPHAYN EAIRKHHESLLLSHADKFGIGHLWTRVAEGLPEEVLPDMAEELKATLMIMGCVGRTGL SAALLGNTAEHVIDRLSCDILILKPADYCCPVDSRRNQS" misc_feature complement(2172987..2173898) /locus_tag="B565_1942" /note="universal stress protein UspE; Provisional; Region: PRK11175" /db_xref="CDD:183015" misc_feature complement(2173467..2173889) /locus_tag="B565_1942" /note="Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to...; Region: USP_Like; cd00293" /db_xref="CDD:30165" misc_feature complement(order(2173509..2173520,2173548..2173553, 2173557..2173562,2173782..2173784,2173869..2173877)) /locus_tag="B565_1942" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30165" misc_feature complement(2173008..2173439) /locus_tag="B565_1942" /note="Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to...; Region: USP_Like; cd00293" /db_xref="CDD:30165" misc_feature complement(order(2173050..2173061,2173089..2173094, 2173098..2173103,2173287..2173289,2173419..2173427)) /locus_tag="B565_1942" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30165" gene complement(2174055..2174810) /locus_tag="B565_1943" /db_xref="GeneID:10487860" CDS complement(2174055..2174810) /locus_tag="B565_1943" /codon_start=1 /transl_table=11 /product="fumarate/nitrate reduction transcriptional regulator" /protein_id="YP_004392595.1" /db_xref="GI:330829643" /db_xref="GeneID:10487860" /translation="MIPEKKPGRRIQSGGCAIHCQDCSISQLCIPFTLNDNELDQLDS IIERKKPIQKGEELFKAGDEFKSLYAIRSGTIKSYTITEQGDEQITAFHLAGDLVGFD AINKQAHPSFAQALETAMVCEIPFEVLDDLSGKMPKLRQQIMRLMSSEIMGDQEMILL LSKKNAEERLAAFLHNLSVRFSERGFSAKEFRLSMTRGDIGNYLGLTVETISRLLGRF QKSGLISVKGKYITVLDQVALGMMAGATRPPCG" misc_feature complement(2174079..2174780) /locus_tag="B565_1943" /note="fumarate/nitrate reduction transcriptional regulator; Provisional; Region: PRK11161" /db_xref="CDD:183004" misc_feature complement(2174379..2174711) /locus_tag="B565_1943" /note="effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO...; Region: CAP_ED; cd00038" /db_xref="CDD:28920" misc_feature complement(order(2174478..2174486,2174508..2174513)) /locus_tag="B565_1943" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:28920" misc_feature complement(order(2174394..2174402,2174412..2174420)) /locus_tag="B565_1943" /note="flexible hinge region; other site" /db_xref="CDD:28920" misc_feature complement(2174106..2174315) /locus_tag="B565_1943" /note="helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family; Region: HTH_CRP; cd00092" /db_xref="CDD:28976" misc_feature complement(2174301..2174306) /locus_tag="B565_1943" /note="putative switch regulator; other site" /db_xref="CDD:28976" misc_feature complement(order(2174190..2174192,2174217..2174225, 2174229..2174231)) /locus_tag="B565_1943" /note="non-specific DNA interactions [nucleotide binding]; other site" /db_xref="CDD:28976" misc_feature complement(2174172..2174192) /locus_tag="B565_1943" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:28976" misc_feature complement(order(2174172..2174174,2174184..2174189)) /locus_tag="B565_1943" /note="sequence specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28976" misc_feature complement(2174184..2174189) /locus_tag="B565_1943" /note="putative cAMP binding site [chemical binding]; other site" /db_xref="CDD:28976" gene complement(2174879..2175565) /locus_tag="B565_1944" /db_xref="GeneID:10487861" CDS complement(2174879..2175565) /locus_tag="B565_1944" /codon_start=1 /transl_table=11 /product="integral membrane protein" /protein_id="YP_004392596.1" /db_xref="GI:330829644" /db_xref="GeneID:10487861" /translation="MTHSLDLAGALLVGLAGSAHCIGMCGGVSAALSMAIPANKQHFW GRLAYLLNYNLGRILSYVIAGALVGGLLATTSELGAGKHAIAGLRLVAALLMIALGLY LAGWWQGILLLERLGARLWPRIKPLAGKFLPFTSPVQALPFGMVWGWLPCGLVYSMLT WSAAAGSASGGALIMLFFGLGTLPTLFALGGLADRLRYWLTLRSLRLGGALLLILFGV HTFWIGIASF" misc_feature complement(<2175083..2175514) /locus_tag="B565_1944" /note="Cytochrome C biogenesis protein transmembrane region; Region: DsbD; cl00515" /db_xref="CDD:153822" gene complement(2175549..2175737) /locus_tag="B565_1945" /db_xref="GeneID:10487862" CDS complement(2175549..2175737) /locus_tag="B565_1945" /codon_start=1 /transl_table=11 /product="cytochrome oxidase maturation protein, cbb3-type" /protein_id="YP_004392597.1" /db_xref="GI:330829645" /db_xref="GeneID:10487862" /translation="MNIIFVLIPIAILFVIIAGVVFFWAIRSEQFEDLDRQGSNILFD EEQPAHKPVKPADHDPQP" misc_feature complement(2175600..2175734) /locus_tag="B565_1945" /note="Cytochrome oxidase maturation protein cbb3-type; Region: CcoS; cl01253" /db_xref="CDD:194083" gene complement(2175876..2178179) /locus_tag="B565_1946" /db_xref="GeneID:10487863" CDS complement(2175876..2178179) /locus_tag="B565_1946" /codon_start=1 /transl_table=11 /product="Cation transport ATPase" /protein_id="YP_004392598.1" /db_xref="GI:330829646" /db_xref="GeneID:10487863" /translation="MCCPGCQAVAETIMECGLASYYDHRTAPGTKGDLVPEELAALTH YDLAEVQQDFVTDSGTLREIQLTVEGLTCAACAWLIERHLMTLTGLRFINVNTTTHRA RIKWDPGQLSLSDILKGFAQIGYRAYPFQTHQQEALYAKEVRSYMFRLALAGLGSMQV MMCAVALYMDLFISVEDEFMVYFKWISLLLSTPIMIYSAQPFYVGAWRSLKQGHLSMD VSVSLALIGAFVASMWATVFNTGEVYYDSITMFVFFLLLGRFLELRARRKASESSSNL ARLVPIMATRIDDEGEHEVAAKTLQVGDRVRVLAGATLPADGIIIEGQASLNESMLTG EQLPLLKQRGDQVYAGTINTDAPLQIRVSHRIEESRIAQIMRLQDHALDDKPAIAQMA DQLSRHFILVLLIITAAVWTFWHFHQPDQAFWVTLAVLVATCPCALSLATPTALTSAT ANLTRNGILLRRGHVLDILTKANRIVMDKTGTLTTGEISLTGTTTLAEMDETQCLAIA RAMEAQSEHPIARAFRLPADNITVLPSAREITPVIGHGITALVDGVRYRIGSARWLGL DPAQEHGRGLAIYLADEQQVLARFNLEDTLRPDARALIAAFKSAGLQTTVLTGDSSLQ ADEIARELGVDELVKGVSPDGKLAYLKAREAQGDISIMVGDGINDAPVLAGAHASFAM VGGTDLAKNSADAILLADDLSRLLEARVLAMRTRKIIIENFAWSIGYNLLVLPLAACG WLPPYLAAAGMSLSSLIVVTNSMRLNR" misc_feature complement(2178012..>2178179) /locus_tag="B565_1946" /note="Putative metal-binding domain of cation transport ATPase; Region: ATPase-cat_bd; pfam12156" /db_xref="CDD:192946" misc_feature complement(2175879..2177999) /locus_tag="B565_1946" /note="Cation transport ATPase [Inorganic ion transport and metabolism]; Region: ZntA; COG2217" /db_xref="CDD:32399" misc_feature complement(2177796..2177987) /locus_tag="B565_1946" /note="Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain...; Region: HMA; cd00371" /db_xref="CDD:29471" misc_feature complement(order(2177952..2177954,2177961..2177969)) /locus_tag="B565_1946" /note="metal-binding site [ion binding]" /db_xref="CDD:29471" misc_feature complement(2176779..2177378) /locus_tag="B565_1946" /note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122" /db_xref="CDD:189402" misc_feature complement(2176137..>2176439) /locus_tag="B565_1946" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" gene complement(2178347..2178847) /locus_tag="B565_1947" /db_xref="GeneID:10487864" CDS complement(2178347..2178847) /locus_tag="B565_1947" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392599.1" /db_xref="GI:330829647" /db_xref="GeneID:10487864" /translation="MTQPLSKPWYHQFWPWFIIALPTAAVVGSIATAIIASKDGVNLV AEDYYKQGKEINQDLSKFDRSEALNIRFGLEVDGNELTLKPISGDIPAGQALYLSLFH PTLAGQDSEHMITADASGTYRLHFDKPLVGKWHIRVDAFDHQWRLQETVQLPTLASVE LDPKGR" misc_feature complement(2178392..2178814) /locus_tag="B565_1947" /note="FixH; Region: FixH; cl01254" /db_xref="CDD:154296" gene complement(2178988..2179971) /locus_tag="B565_1948" /db_xref="GeneID:10487865" CDS complement(2178988..2179971) /locus_tag="B565_1948" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, cbb3-type subunit III" /protein_id="YP_004392600.1" /db_xref="GI:330829648" /db_xref="GeneID:10487865" /translation="MSTLFSIFVTVISLGTILGCFLLLMWCRKDKMGVEEGKSMGHSF DGIEEINNPLPKWWTYMFLFFIVTGLVYLIAFPGLGNFKGLLGWQSSNQDVRSLAESK AATESAKAEGRAVEYDREVAKADEIYGAKFRELTYEADGKTYRAITEIAKDPEALKVG QRLFLQNCSQCHGSDARGGRGFPNLTDSEWQWGGQPDQIKTTIMGGRQGIMAAWGEIL GKDGVQEVASYVLSLSGRKVDLVEAKKGEARFAICAACHGADAKGGIAVGAPDLTNNT WLYGGSREVVVQTITHGRHGVMPAWKDILGEDKVHLLASYVYSLSHQQSAK" misc_feature complement(2179000..2179887) /locus_tag="B565_1948" /note="cytochrome c oxidase, cbb3-type, subunit III; Region: ccoP; TIGR00782" /db_xref="CDD:129864" misc_feature complement(2179270..2179494) /locus_tag="B565_1948" /note="Cytochrome c; Region: Cytochrom_C; cl11414" /db_xref="CDD:196222" misc_feature complement(2179009..2179242) /locus_tag="B565_1948" /note="Cytochrome c; Region: Cytochrom_C; cl11414" /db_xref="CDD:196222" gene complement(2179971..2180150) /locus_tag="B565_1949" /db_xref="GeneID:10487866" CDS complement(2179971..2180150) /locus_tag="B565_1949" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, cbb3-type, CcoQ subunit" /protein_id="YP_004392601.1" /db_xref="GI:330829649" /db_xref="GeneID:10487866" /translation="MDYGTFRGLYTLLLMAIMIGIIVWAYSKRRKTSFDEAANLVFAD DEQPGADKKNAGAKQ" misc_feature complement(2180016..2180150) /locus_tag="B565_1949" /note="Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of...; Region: cbb3_Oxidase_CcoQ; cl00282" /db_xref="CDD:193748" gene complement(2180161..2180775) /locus_tag="B565_1950" /db_xref="GeneID:10487867" CDS complement(2180161..2180775) /locus_tag="B565_1950" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, Cbb3-type subunit II" /protein_id="YP_004392602.1" /db_xref="GI:330829650" /db_xref="GeneID:10487867" /translation="MSNNNRHEIFEKSVPMLVVGIIFAISLGGLVEITPLFFQKQTTE PVEGLKPYTALQMEGRDIFIREGCTNCHSQMIRPFRAETERYGHYSVAGESVWEHPFL WGSKRTGPDLARVGGRYSDEWHKVHLINPRDVVPESNMPAYPWLDTNVLTGEMTAKKL ALFRDHFGVPYTDADIQGAGEAVKGKTELDALVAYLQSLGHALK" misc_feature complement(2180164..2180760) /locus_tag="B565_1950" /note="Cytochrome C oxidase, mono-heme subunit/FixO; Region: FixO; cl01130" /db_xref="CDD:186349" gene complement(2180792..2182216) /locus_tag="B565_1951" /db_xref="GeneID:10487868" CDS complement(2180792..2182216) /locus_tag="B565_1951" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, Cbb3-type subunit I" /protein_id="YP_004392603.1" /db_xref="GI:330829651" /db_xref="GeneID:10487868" /translation="MSHTTNHPEYNYTVVRQFTVMTIVWGIVGMSVGVLIAAQLIWPA LNFETPWLTYSRLRPLHTNAVIFAFGVSALMATSFYVVQRTCQTRLFGGPLATFVFWG WQAIILSAAISLPLGFTSAKEYAELEWPIDIAITVVWVTYAIVFFGTLMKRTTSHIYV ANWFFGAFIITVAVLHIVNNMEVPLSGMKSYSMYSGAMDAMVQWWYGHNAVGFLLTAG FLGMMYYFVPKQAGRPVYSYRLSIVHFWALISLYIWAGPHHLHYTALPDWAQSLGMVM SLILFVPSWGGMINGIMTLSGAWHKLRYDPILRFLIVSLSFYGMSTFEGPMMAIKTVN ALSHYTDWTVGHVHSGALGWVAMVSIGAVYHLIPNLFGQGRMYSVKLINVHFWLATVG TVLYIVAMWISGVMQGLMWRAVNEDGTLTYSFVEALQASYPFYFVRFLGGCFFVTGML LMAYNAYRTITAPKGSLEPVAQPA" misc_feature complement(2180837..2182195) /locus_tag="B565_1951" /note="Cytochrome cbb3 oxidase subunit I. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the...; Region: cbb3_Oxidase_I; cd01661" /db_xref="CDD:29932" misc_feature complement(order(2180918..2180920,2181029..2181031, 2181161..2181163,2181173..2181175,2182166..2182168)) /locus_tag="B565_1951" /note="Low-spin heme binding site [chemical binding]; other site" /db_xref="CDD:29932" misc_feature complement(order(2180984..2180986,2181200..2181205, 2181215..2181217,2181614..2181619,2181632..2181634)) /locus_tag="B565_1951" /note="Putative water exit pathway; other site" /db_xref="CDD:29932" misc_feature complement(order(2181179..2181181,2181440..2181445, 2181593..2181595)) /locus_tag="B565_1951" /note="Binuclear center (active site) [active]" /db_xref="CDD:29932" misc_feature complement(order(2180981..2180986,2181200..2181205, 2181440..2181442)) /locus_tag="B565_1951" /note="Putative proton exit pathway; other site" /db_xref="CDD:29932" gene 2182528..2182959 /locus_tag="B565_1952" /db_xref="GeneID:10487869" CDS 2182528..2182959 /locus_tag="B565_1952" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392604.1" /db_xref="GI:330829652" /db_xref="GeneID:10487869" /translation="MHLVLVLALLLALMAYRTWFSADNSVSADQKKDQICDLSHTPCS ALIGDKPLTVAIKELPLRAEHDFAIAITGGDPAIKPVKATLEGKDMFMGTIPVSFEEI DGQWQGVTQVGSCTSPVMIWLLNIEWSNGQRQQLALSVARE" gene 2183053..2183511 /locus_tag="B565_1953" /db_xref="GeneID:10487870" CDS 2183053..2183511 /locus_tag="B565_1953" /codon_start=1 /transl_table=11 /product="GAF domain-containing protein" /protein_id="YP_004392605.1" /db_xref="GI:330829653" /db_xref="GeneID:10487870" /translation="MIEKQPFYRTLNQQAKALLEGETDLIANLANLSALLNQELEEIN WVGFYLLQGETLVLGPFQGKPACVRIPVGRGVCGTAVAEGRTQLIDDVHQFDGHIACD GASNSEIVIPVRRGGEIIGVLDIDSPIFNRFDQEDRIGLEETVQILESML" misc_feature 2183053..2183508 /locus_tag="B565_1953" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" gene 2183614..2184252 /locus_tag="B565_1954" /db_xref="GeneID:10487871" CDS 2183614..2184252 /locus_tag="B565_1954" /codon_start=1 /transl_table=11 /product="ProQ activator of osmoprotectant transporter ProP" /protein_id="YP_004392606.1" /db_xref="GI:330829654" /db_xref="GeneID:10487871" /translation="MENTEKLKNSKEIVAYLVEKFPACFVAEGEAKPLKIGIFQDLAE RLADDARVSKTMLRSALRQYTSSWRYLHGLKAGQARVDLDGNPGELLTEEHIEHAKQA LKESKERVFASRRTNTKEKDEKAKKPRRPAVRKTEKADVAAKPKAAAKAPVADAPLVK VDAATLKVGQDVRVVMGKFPVPATIKEVTKDDVQVQLQTGMMVRVKSEHLVL" misc_feature <2183674..2183976 /locus_tag="B565_1954" /note="FinO bacterial conjugation repressor domain; the basic protein FinO is part of the the two component FinOP system which is responsible for repressing bacterial conjugation; the FinOP system represses the transfer (tra) operon of the F-plasmid which...; Region: FinO_conjug_rep; cl00174" /db_xref="CDD:185810" gene 2184261..2186276 /locus_tag="B565_1955" /db_xref="GeneID:10487872" CDS 2184261..2186276 /locus_tag="B565_1955" /codon_start=1 /transl_table=11 /product="C-terminal processing peptidase" /protein_id="YP_004392607.1" /db_xref="GI:330829655" /db_xref="GeneID:10487872" /translation="MLKHGVIRFSLVACSLALAGLAQAIEPVLKESDLPVLAQESQHA TASKRITNLFTRSHYKQFKLDDAFSSVIFDKYLENLDYSRNLFLASDISRFEKYRNGF DTDLERGRLAPAYEMFNLSQQRRYERFEYALKLLDTPFDFTQTDNYVFDREGAAWPKD EAELNELWRQRVKFDALSLKLSGKEWPEIKELLGKRYNNAIKRMSQTESEDVFQLFMN SFARAIEPHTSYLSPRSADRFNTEMNLSLEGIGAVLQAEDDFTVIRSLVPGGPAAKSN HLKPDDKITGVGQEDGKIVDVIGWRLDDVVELIKGPKGSKVKLEIQRGKGATAKTEQI ELTRDKVRLEDRAAKSKVINAEGKKIGVIEIPSFYVNLHDDVIKELSSLNKKKIDGLI IDLRGNGGGALTEASALSGLFFASGPVVQIRDHMGRITVNGDDDGNVYYGGPMSVMID RYSASASEIFAAAMQDYGRALILGENSFGKGTVQQHRSLAKVYDFYEQPLGHVQYTIA KFYRIDGGSTQNKGVAPDISFPTPVAPEETGESREFNALPWDKIASANYEKLGNFASV LPKLQAAHDARIAKDPEFAYVMQDIADYKEEKDKKSVSLNEAERVAEQAKQDEKALKR TNERLARLGKPAVKSLDELPADFEAPDEYLIEAANITADLAKVSKRS" misc_feature 2184279..2186273 /locus_tag="B565_1955" /note="carboxy-terminal protease; Provisional; Region: PRK11186" /db_xref="CDD:183023" misc_feature 2184999..2185280 /locus_tag="B565_1955" /note="PDZ domain of C-terminal processing-, tail-specific-, and tricorn proteases, which function in posttranslational protein processing, maturation, and disassembly or degradation, in Bacteria, Archaea, and plant chloroplasts. May be responsible for...; Region: PDZ_CTP_protease; cd00988" /db_xref="CDD:29045" misc_feature order(2185005..2185016,2185020..2185022,2185173..2185178, 2185185..2185190) /locus_tag="B565_1955" /note="protein binding site [polypeptide binding]; other site" /db_xref="CDD:29045" misc_feature <2185335..2185850 /locus_tag="B565_1955" /note="C-terminal processing peptidase; serine protease family S41; Region: Peptidase_S41_CPP; cd07560" /db_xref="CDD:143476" misc_feature order(2185623..2185625,2185698..2185700) /locus_tag="B565_1955" /note="Catalytic dyad [active]" /db_xref="CDD:143476" misc_feature 2185851..2186267 /locus_tag="B565_1955" /note="C-terminal domain of tail specific protease (DUF3340); Region: DUF3340; pfam11818" /db_xref="CDD:192843" gene 2186420..2189044 /locus_tag="B565_1956" /db_xref="GeneID:10487873" CDS 2186420..2189044 /locus_tag="B565_1956" /codon_start=1 /transl_table=11 /product="aminopeptidase N" /protein_id="YP_004392608.1" /db_xref="GI:330829656" /db_xref="GeneID:10487873" /translation="MTDHSQAMTAKFRQDYQAPLYWIDTIDLDFQLQEPLTQVTAITR IRRNGEHNAPLVLDGEQLTLKSVAIDGIPCDHYEQGESSLTLFNLPAECVLTIVTLLD PAANTALEGLYKSGDAYCTQCEAEGFRRITYYLDRPDILARYSTRITADKAQFPFLLS NGNKVDSGDLDGGRHFVQWQDPFPKPSYLFALVAGDFDVERSHYTTESGRKVALEIFV DKGNLDRAGFAMESLINSMRWDEQRFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNS KFVLANPATATDSDYHGIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFS SDLGSRGVNRINNVRTVRGPQFAEDAGPMAHPIRPDVVIEMNNFYTLTVYEKGSEVIR MMHTLLGEDAFQAGMRLYFERHDGSAATCDDFVQAMEDASGVDLGRFRRWYSQSGTPE LTVTDEYDAASGIYRLHVSQHTPPTQDQPQKLPLHIPLDIELYDEQGAVIALQYQGKA IGNVLDVLEAEQTFEFDRVPVKPVPSLLRDFSAPVKLHYDYSDEALAFLMRFARNEFA RWDAAQMLINKAVIDGVARVQHGQGVELSQTLLAAFVAILDDSDLDLALKAEILALPG EATLAELFEVADIDAIHQVRDAIHTRLAEAFGARLAATYQSLRLNGYQVVHADMAKRA LKGVVLGYLAALDTEHADALLREQYATADNMTDTLAALQVANGYLLPCRAALLADFEG KWAKDGLVLDNWLRLIGSKPAADVLSEVKQAMSHPTFSIRNPNRLRALIGSFAMSNQM QFHAVDGSGYRFLTDLLIELNEVNPQVASRLITPLIQFKRLDEARKALIRAELTRLAN LEGLARDLFEKVSKALQQ" misc_feature 2186420..2189041 /locus_tag="B565_1956" /note="aminopeptidase N; Provisional; Region: pepN; PRK14015" /db_xref="CDD:184453" misc_feature 2186462..2189035 /locus_tag="B565_1956" /note="Peptidase M1 family containing Aminopeptidase N; Region: M1_APN_1; cd09600" /db_xref="CDD:189007" misc_feature order(2186783..2186785,2186789..2186794,2187206..2187220, 2187305..2187310,2187317..2187322,2187329..2187331, 2187383..2187388,2187545..2187547,2187554..2187556, 2187569..2187571,2188889..2188891) /locus_tag="B565_1956" /note="active site" /db_xref="CDD:189007" misc_feature order(2187317..2187319,2187329..2187331,2187386..2187388) /locus_tag="B565_1956" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:189007" gene 2189115..2189336 /locus_tag="B565_1957" /db_xref="GeneID:10487874" CDS 2189115..2189336 /locus_tag="B565_1957" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392609.1" /db_xref="GI:330829657" /db_xref="GeneID:10487874" /translation="MKQFTFRLSLNSDEVMLMYQGHARRLVVRSEQGLTLELGIEKIR PFVAINGVHGYFRLKTQDDYRFISLERIN" misc_feature 2189124..2189327 /locus_tag="B565_1957" /note="Protein of unknown function (DUF2835); Region: DUF2835; pfam11197" /db_xref="CDD:151639" gene 2189615..2194453 /locus_tag="B565_1958" /db_xref="GeneID:10487875" CDS 2189615..2194453 /locus_tag="B565_1958" /codon_start=1 /transl_table=11 /product="NAD-glutamate dehydrogenase" /protein_id="YP_004392610.1" /db_xref="GI:330829658" /db_xref="GeneID:10487875" /translation="MALKDAPTSVLLENVLSLIHQKLPKNSASLVERFVAKFYGNMAS SDLHDRNDSDLYGAALSLWNALNQRSGTDPYIRVYNPELTRHGWQSPHTIVEVILQDS PFLVDSIRMALKRLNITAHMMLHQPLHLIRGADGKIDAILALDNTDGQTSVETAFLIE IDHLTSEEQMAALATELNSVAGEVALAVGDWQPMLAKLNEIIDELPKRKHPVSKEEVA SCVAFLKWVAAHNFTLMGYRRYDVKAVEGDHEILPQANSSLGLMKNSIKEVGQRLGNM PASARHAALSSDLLILTKSNSKSRVHRPAYVDYIGIKRFDEHGKVIGEDRFIGLYASS IYNTSATQIPLISHRLERIMAASGHEKGSHAYKALLNVLETYPRDELIQAREEELLAT GLGVLEMQERDMLRLFVRRDVYGRFFSCMVYVTKERYNTALRIKTQQILQKYFGSNEE VEFNVYFTEGVLARTHYIVRVNNNNVDVDVNEVQNNLIEAARSWDDRLDSVLLSHYGE ARGNELRRRFSTAFPRAYKEDVLPGSAVADIMALDNLSEAEPLGMLFYRAQEEENDRR VRLKLFHRTEPIHLSDVLPMLENMGLRVIGETPYQVRTPGGDLFWILDFSMLLHGEQP FDLAQSQQRFQQAFAAIWNKQLEDDGFNRLVLGAGLTGRQVSVLRAYAKYMRQTGVSF SQSYIEETLTRYPDIAQLLFTLFEQRLDPAGKQDAKAEAKLHEELATKLDQVANLDDD RIIRRYVEMIDATLRTNYYQLDKAGNIKPYISFKLAPSSITDMPLPLPKFEIFVYSPR VEGVHLRWGKVARGGLRWSDRKEDFRTEVLGLVKAQQVKNTVIVPVGAKGGFYCKQMP MGATRAVIQEEGKACYRLFIRGLLDVTDNIIGGEVIPPTSVVRHDEDDYYLVVAADKG TATFSDIANEISLEYGHWLGDAFASGGSVGYDHKKMGITARGAWESVKRHFREIGVNC QTTDFTCVGIGDMAGDVFGNGMLLSEHTRLVGAFNHMHIFVDPTPDAAKSFVERQRLF DLPGSSWDDYNRELISQGGGIFLRSAKSIKLSPEMQTLLGTDKASMAPNELIKALLCL NVDLLWNGGIGTYVKSARESDGEVGDRSNDALRVNGRDLRARIVGEGGNLGFTQLGRV EYASQGGRINTDFTDNVGGVDCSDNEVNIKILLNQLVAAGDLTLKQRNQMLYEMTDDV AQIVITNAYRQSQSISVTSFRGSEQLKEQQRFIQGLEREGKLDRALEFLPSDEELSER MAAGQGLTRPELAVLVAYGKMVLKEQLNCPEVTDEPFLANMLVTSFPTKVQQQFGAQL ADHPLRGEIIATRVANMLVNDMGLNFASRMKDETGASVAEVACCFAMAREVFGMNQLW RDIEGCDNLVDAQTQLELMFYSRRIVRRATRWFLRARNRSWSISENIAFFRPAFETLG KHLYEVMDESEVAEHRQAVAKWMEKQVPEAIARQVAHMSSLFSSLDLAQIAAEHKTDI LRAANVYYRLGAKLDLHWFLDQINHQPVGNHWQAMARASFREDLDWQQRSLTSVVLEG CKDQGECATILADWISEHEQLLSRWTHMLADFKTTSTHEFAKFSVALRELNLLQLNCR AL" misc_feature 2189840..2194429 /locus_tag="B565_1958" /note="Bacterial NAD-glutamate dehydrogenase; Region: Bac_GDH; pfam05088" /db_xref="CDD:147324" misc_feature 2190233..>2190478 /locus_tag="B565_1958" /note="ATP P2X receptor; Region: P2X_receptor; cl02993" /db_xref="CDD:164028" gene 2194531..2195541 /locus_tag="B565_1959" /db_xref="GeneID:10487876" CDS 2194531..2195541 /locus_tag="B565_1959" /codon_start=1 /transl_table=11 /product="dihydroorotate dehydrogenase 2" /protein_id="YP_004392611.1" /db_xref="GI:330829659" /db_xref="GeneID:10487876" /translation="MLYPIARHFLFKLNPEQAHDLSMKYLPRLLGTPLDCFFRQNLPK RPVTVMGLSFANPVGLAAGLDKDGECIDALGAMGFGFIEVGTVTPRPQSGNDKPRLFR VIPAEGIINRMGFNNKGVDHLVAKVKEAKYQGVIGINIGKNKDTPIEQGKDDYLICMD KVYDHAGYIAVNISSPNTPGLRSLQYGEALDELLAALKVRQQELAAQYKKYVPLAVKI APDLSLEEIDQVAASLVRNGIDGVIATNTTLEREMIYDMPHAGEAGGLSGRPLQHKST EVIRHLAKALNGVLPIIGVGGIDSAMAAREKLAAGASLVQIYSGFIYKGPGLVKEIVT NI" misc_feature 2194549..2195538 /locus_tag="B565_1959" /note="Dihydroorotate dehydrogenase (DHOD) class 2. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD...; Region: DHOD_2_like; cd04738" /db_xref="CDD:73400" misc_feature order(2194585..2194587,2194834..2194836) /locus_tag="B565_1959" /note="quinone interaction residues [chemical binding]; other site" /db_xref="CDD:73400" misc_feature 2194666..2195538 /locus_tag="B565_1959" /note="Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]; Region: PyrD; COG0167" /db_xref="CDD:30516" misc_feature order(2194714..2194716,2194726..2194728,2194786..2194788, 2194861..2194863,2194867..2194875,2195044..2195046, 2195053..2195055,2195059..2195061,2195179..2195181, 2195263..2195271,2195332..2195334,2195419..2195421, 2195482..2195487) /locus_tag="B565_1959" /note="active site" /db_xref="CDD:73400" misc_feature order(2194726..2194728,2195053..2195055,2195179..2195181) /locus_tag="B565_1959" /note="catalytic residues [active]" /db_xref="CDD:73400" misc_feature order(2194786..2194788,2194861..2194863,2195044..2195046, 2195179..2195181,2195263..2195268,2195332..2195334, 2195419..2195421,2195482..2195487) /locus_tag="B565_1959" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73400" misc_feature order(2194861..2194863,2195044..2195046,2195050..2195052, 2195266..2195271) /locus_tag="B565_1959" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73400" gene 2195632..2196168 /locus_tag="B565_1960" /db_xref="GeneID:10487877" CDS 2195632..2196168 /locus_tag="B565_1960" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392612.1" /db_xref="GI:330829660" /db_xref="GeneID:10487877" /translation="MFIQPTDSWQWHYDAQSDRLMLDLSDNMLFATEYKGRQLVPSSF ATQPFCVDDAALYYQLMDKAAELEWSIPHQVQLVLNAIAVSRFYKPLMPQSWFFSEQH PQVIPQNGDLVLMNTPHGNGEFMVIEAGDQASVCLNLTADLVLTTSKNLPRFGVIKVM NNRMKPRITVTEQYRQVS" misc_feature 2195692..2196153 /locus_tag="B565_1960" /note="Protein of unknown function (DUF1379); Region: DUF1379; pfam07126" /db_xref="CDD:148625" gene 2196549..2196812 /locus_tag="B565_1961" /db_xref="GeneID:10487878" CDS 2196549..2196812 /locus_tag="B565_1961" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L31" /protein_id="YP_004392613.1" /db_xref="GI:330829661" /db_xref="GeneID:10487878" /translation="MKPHIHPDYRLVLFHDTAADAFFLVGSTIKSDRRYTWQDGKEYP YVSLDVSSQSHSFYTGKQKQVSSEGSVARFNKRFGAFSSKKES" misc_feature 2196549..2196803 /locus_tag="B565_1961" /note="Ribosomal protein L31; Region: Ribosomal_L31; cl00377" /db_xref="CDD:185951" gene 2197115..2199274 /locus_tag="B565_1962" /db_xref="GeneID:10487879" CDS 2197115..2199274 /locus_tag="B565_1962" /codon_start=1 /transl_table=11 /product="ribosomal RNA large subunit methyltransferase L" /protein_id="YP_004392614.1" /db_xref="GI:330829662" /db_xref="GeneID:10487879" /translation="MKEFFATCPKGLENLLADELTNLGAEQVRETVAGVHFKGELAIG YKACLWSRFASRIVLVLSEFQMNDDLDLYLGAHTIPWEEHFSGTSTIAVDFTGTNPAI RNTQYGALKIKDAIVDRFTKRGHVRPDVDKKSPDIRIMAHLGKGKANITLDLSGPALH QRFYRQGTGEAPLKENLACAMIARSGWAGEPMMDPMCGSGTLLIEAAFIAADMAPALR RERFGFDRWLQHDSELWQSLMMEAQVRAKRGMQRCEVKLFGCDADQRVLLKARDNAKA AGVAHLITFKQADVTKLENPLPMPAPVEGEEGQGEARQVGMLISNPPYGERLGEFPAL LEVHQALGDALRRSFQGWKVSILSASPELLSCLRLRADKQYRLFNGALECQLRNYQIA LDSVASQKEVAQDFANRLRKNLKTLEKWANKEGIDCYRIYDADLPEYNAAIDRYQDYL VVQEYAAPKDIPAQKTRQRLLDMVQAAIKVTGMDGEKVILKVRERQEGKQQYQKLSEE QHRMEVQEYGARLWVNLYDYLDTGLFLDHRQTRRMLGQMAKGKRFLNLFAYTGSATVH AGLGGASETTTVDMSHTYLNWAQDNMRLNSLVGRQHKFVQADCLKWLSEADEQYDLIF IDPPTFSNSKRMDESFDVQRDHLLLMQHLKRLLAADGTLVFSNNKRHFKMDLAGLEAT GLKAQNITQKTRPKDFERNQHIHNCWIITHAPEQGEA" misc_feature 2197115..2199253 /locus_tag="B565_1962" /note="23S rRNA m(2)G2445 methyltransferase; Provisional; Region: rlmL; PRK11783" /db_xref="CDD:183312" misc_feature 2197316..2197576 /locus_tag="B565_1962" /note="THUMP domain; Region: THUMP; cl12076" /db_xref="CDD:159736" misc_feature 2197598..2198266 /locus_tag="B565_1962" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" misc_feature 2198441..2199208 /locus_tag="B565_1962" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene 2199274..2199504 /locus_tag="B565_1963" /db_xref="GeneID:10487880" CDS 2199274..2199504 /locus_tag="B565_1963" /codon_start=1 /transl_table=11 /product="thiol-disulfide isomerase and thioredoxin" /protein_id="YP_004392615.1" /db_xref="GI:330829663" /db_xref="GeneID:10487880" /translation="MLTLFHTDGCHLCEQAWALVEEAGLATATRQCDIMDDEQWLAAY RVRIPVLRDEAGRELGWPFTLAELKSWAACQG" misc_feature 2199274..2199486 /locus_tag="B565_1963" /note="Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; Region: Thioredoxin_like; cl00388" /db_xref="CDD:193797" gene 2199578..2201491 /locus_tag="B565_1964" /db_xref="GeneID:10487881" CDS 2199578..2201491 /locus_tag="B565_1964" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding component" /protein_id="YP_004392616.1" /db_xref="GI:330829664" /db_xref="GeneID:10487881" /translation="MALLTLHGACLSFSDFPLLDNAELTIERGERLCLVGRNGAGKST LMKVIASELPLDDGRLVLQQDLKVTRLEQDPPASSELTVFDYAAEGLAGVGELLKQYH HISMELASDPSDANIRKMSELQEQLDYQNGWQFETRISQVLTLLGLAPDVTLDSLSGG WLRKVALARALACDPDLLLLDEPTNHLDIEAINWLEDFLKDFRGAIVFISHDREFIHK LATRIIDLDRGAITSWPGNYDEYLQGKEEWLRVEELKNAEFDRKLAQEEVWVRQGIKA RRTRNEGRVRALEAMRMERSQRRELQGKAKLQLDEVNRSGKLVFETEGLGLDFGDRTL FKGLDLQVLRGDKIALVGPNGCGKSTLIKLLLGQLEPTRGTVKGGTNLEVAYFDQYRE QLDPEQTVVDNVGEGKQEVMVRGRSRHILGYLQDFLFEPKRARTPVKALSGGEKNRLL LAKLFLKPSNLLILDEPTNDLDVETLELLEELLSDYPGTLLLVSHDRRFIDNTVTGCW LFEGDGRISDYVGGYADMMATREQQNAQQQAKSAPVKAPEPVVAAVPEAPKKSKKLSY KLQLELEGLPARLEQLEAELDALQSEINQPGFFSLPADKTQPKLDALNAAEAALEQAF ARWEELEGLKNQE" misc_feature 2199578..2201482 /locus_tag="B565_1964" /note="ABC transporter ATPase component; Reviewed; Region: PRK11147" /db_xref="CDD:182996" misc_feature 2199587..>2199796 /locus_tag="B565_1964" /note="ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by...; Region: ABCF_EF-3; cd03221" /db_xref="CDD:72980" misc_feature 2199704..2200132 /locus_tag="B565_1964" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature <2200037..2200264 /locus_tag="B565_1964" /note="ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by...; Region: ABCF_EF-3; cd03221" /db_xref="CDD:72980" misc_feature 2200247..2200477 /locus_tag="B565_1964" /note="ABC transporter; Region: ABC_tran_2; pfam12848" /db_xref="CDD:193322" misc_feature 2200538..2201119 /locus_tag="B565_1964" /note="ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by...; Region: ABCF_EF-3; cd03221" /db_xref="CDD:72980" gene 2201650..2201829 /locus_tag="B565_1965" /db_xref="GeneID:10487882" CDS 2201650..2201829 /locus_tag="B565_1965" /codon_start=1 /transl_table=11 /product="ribosome modulation factor" /protein_id="YP_004392617.1" /db_xref="GI:330829665" /db_xref="GeneID:10487882" /translation="MMKRQKRDRLERARARGYQAGVVGKQKEACPYQCLDARGHWLGG WRDAMEGRGSGLFMK" misc_feature 2201653..2201817 /locus_tag="B565_1965" /note="Ribosome modulation factor; Region: RMF; cl01207" /db_xref="CDD:186385" gene complement(2201914..2202474) /locus_tag="B565_1966" /db_xref="GeneID:10487883" CDS complement(2201914..2202474) /locus_tag="B565_1966" /codon_start=1 /transl_table=11 /product="beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA" /protein_id="YP_004392618.1" /db_xref="GI:330829666" /db_xref="GeneID:10487883" /translation="MTVDNTTMEARLSLCEQGKNSFTREELLACSRGELFGEGNSQLP APNMLMMDRIVKINDNGGEHGKGEILAELDITPDLWFFDCHFPGDPVMPGCLGLDAMW QLVGFFLGWKGGPGKGRALGVGEVKFTGQILPTAKKVTYKITFKRVINRKLVMGIADG VVEVDGRPIYSATDLKVGLFKDTTAF" misc_feature complement(2201929..2202354) /locus_tag="B565_1966" /note="FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA...; Region: FabA; cd01287" /db_xref="CDD:48032" misc_feature complement(order(2202112..2202123,2202154..2202159, 2202166..2202171,2202178..2202180,2202346..2202354)) /locus_tag="B565_1966" /note="active site 1 [active]" /db_xref="CDD:48032" misc_feature complement(order(2202082..2202087,2202091..2202093, 2202097..2202123,2202178..2202180,2202190..2202192, 2202343..2202345,2202349..2202351)) /locus_tag="B565_1966" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48032" misc_feature complement(order(2202082..2202093,2202193..2202201)) /locus_tag="B565_1966" /note="active site 2 [active]" /db_xref="CDD:48032" gene complement(2202552..2204528) /locus_tag="B565_1967" /db_xref="GeneID:10487884" CDS complement(2202552..2204528) /locus_tag="B565_1967" /codon_start=1 /transl_table=11 /product="ATP-dependent serine protease LA-like protein" /protein_id="YP_004392619.1" /db_xref="GI:330829667" /db_xref="GeneID:10487884" /translation="MAELTSEQLKPAFAIEQFPKLSELEPIPFAALQPRAISGIKRLA SFDGDCPVMLLNGFPGADYEGVCQTLIADSNGKDGDLFDLCYTENLNNPYKPIWLRLQ PGTGVEFCEMVGELLKLLSHHLDAERIVTRIMRKQNNDPKIDDFLSDLAAHVALGLEF QHPILINLLIHHEAQEAPVIYGRDLNWDTLFGSINYQTEQGSVYANQHLLEPGLLREA NGGYLILQLDELLDQPHLWFKLKNAMQKGELDWNAYQEGKTLTPFFAPEATPIKLKLI LVGDRLDVAEFQMLDRDMSERIFLRADLVSEVNIEEDLQEFLQYLAWLRQRWSLLDFT PAALAALCRHASRLCDHQEWLSLSEVQLSAIMRMADSLARELGAEVVTDEHIRGALEE QDYRLNYLVEQSDQGVIDGQILLQTDGEEIGQINGLSVIQVSGHPYDFGEPVRLTATV HLGDGDVADIERKAELAGHIHAKAMMIIHGYLSNKFGAENPSPLSANLVFEQSYHEID GDSASLTGLCALLSALARQPIYQHFAVTGAVDQFGNVQAVGGVNEKIEGFFRVCKIHG ITGKQGIILPGTNIQQLNLSDEVIAAVEAGQFHIHPVDHVEEAIELLTGCVAGEPDMP DTLFGRIQERLDELNGSTAKVGLLQSLLGRLFGR" misc_feature complement(2202621..2204288) /locus_tag="B565_1967" /note="Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones]; Region: LonB; COG1067" /db_xref="CDD:31266" misc_feature complement(2202690..>2203007) /locus_tag="B565_1967" /note="Lon protease (S16) C-terminal proteolytic domain; Region: Lon_C; pfam05362" /db_xref="CDD:191262" gene 2204658..2204900 /locus_tag="B565_1968" /db_xref="GeneID:10487885" CDS 2204658..2204900 /locus_tag="B565_1968" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392620.1" /db_xref="GI:330829668" /db_xref="GeneID:10487885" /translation="MKRTEQWSRFDVADVLATEADMVAYLLAALEDGDPALLTAALDD VERARAKLRDDGKPSYTLEELLAQCDPNTTLPGEII" misc_feature 2204658..>2204804 /locus_tag="B565_1968" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cl09100" /db_xref="CDD:195788" gene complement(2205892..2206176) /locus_tag="B565_1969" /db_xref="GeneID:10487886" CDS complement(2205892..2206176) /locus_tag="B565_1969" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392621.1" /db_xref="GI:330829669" /db_xref="GeneID:10487886" /translation="MAQFTFISSGTLHIWFPDVGLQMEAHCKELRIEDCTIIYTNGLH HGQPRALWSLTLHPDDMNELKRILQQFNSNLYLTCQPPTLAIAKRALNIN" gene complement(2206602..2207912) /locus_tag="B565_1970" /db_xref="GeneID:10487887" CDS complement(2206602..2207912) /locus_tag="B565_1970" /codon_start=1 /transl_table=11 /product="Site-specific recombinase, phage integrase family" /protein_id="YP_004392622.1" /db_xref="GI:330829670" /db_xref="GeneID:10487887" /translation="MTQQPLSLPPAMPLFDSLIYLETGNPQVNQYLANLSLNDVPDAG LVYELAVDWLLEQRNSENNYKTYRSELTTFLHWCFREAAISPKDLTRRIMIRYLDYCQ SPPDELIAYRNVAQFVIDKEWVERLPNPQWRPFLGKRELGRTLPYRLSEQAMKTKLAI LSAFFQFLIQEEYMDRNPALLLQRVKRPQQQEADDQVQAFSELQWSYVMQAADTLAND HPEQHERSRFLTILMYACYLRISEVAARPGFTPVMGQFRRDRKTGVWGYFIPQSKGGK RRTVAVSQALLAALERYRRFLGLSPLPTPDEQTPLFVRHKAAAHGREQGELNANLGIR QLRDLIMVIIGKGAELAEQDGFVQDAAEMRQLSPHAIRHTGITHDINLHGRPLSHVQA DAGHDSIDTTSKYLHTSNSERHESAQQKPLDRLNQHVRDNIQED" misc_feature complement(2206692..2207318) /locus_tag="B565_1970" /note="INT_SG1, DNA breaking-rejoining enzymes, integrase/recombinases subgroup 1, C-terminal catalytic domain. The CD contains mainly predicted integrase/recombinase and site-specific XerD recombinases. The members of this CD are found predominantly in...; Region: INT_SG1_C; cd01183" /db_xref="CDD:29504" misc_feature complement(2206677..2207270) /locus_tag="B565_1970" /note="Phage integrase family; Region: Phage_integrase; pfam00589" /db_xref="CDD:144254" misc_feature complement(order(2206698..2206700,2206725..2206727, 2206797..2206799,2206806..2206808,2207094..2207096, 2207196..2207198)) /locus_tag="B565_1970" /note="Int/Topo IB signature motif; other site" /db_xref="CDD:29504" gene complement(2208260..2208562) /locus_tag="B565_1971" /db_xref="GeneID:10487888" CDS complement(2208260..2208562) /locus_tag="B565_1971" /note="DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS" /codon_start=1 /transl_table=11 /product="DNA damage-inducible protein" /protein_id="YP_004392623.1" /db_xref="GI:330829671" /db_xref="GeneID:10487888" /translation="MAVEIKYVVVRGGVEKMTFASKKEADAYDKLLDTADELMTLLAG APIELAPEQQESLAFYLAEQRDVLQTLLRGGKVQAGTKEEEAPAAKRKEKPLKQVA" misc_feature complement(2208338..2208559) /locus_tag="B565_1971" /note="YebG protein; Region: YebG; cl01217" /db_xref="CDD:186387" gene 2208802..2209608 /locus_tag="B565_1972" /db_xref="GeneID:10487889" CDS 2208802..2209608 /locus_tag="B565_1972" /codon_start=1 /transl_table=11 /product="putative lipase transmembrane protein" /protein_id="YP_004392624.1" /db_xref="GI:330829672" /db_xref="GeneID:10487889" /translation="MVVGLPWLLTLLFVVFALLGLRCLVVLGSWLFTRFYPSPAIGPW RRVKMMAQEMLAYLYTFTLLLPFEPLLMAPDRLRPCQRPVLLVHGYGCSRGIWRTQRT RLEAAGHVVATITLMPPFGHIDEMVPLLATRIDDVLAQTGADKLVLVGHSMGGLVCRD YLAIHGGDKVARLITLATPHQGSQLAALGLGANAREMEPGSGWLQRFASVPLCVPGIS VRTSHDNVVMPQERQRLVGMEDIELPAIGHLSLLYSRRTTELLIELLSRV" misc_feature 2209045..>2209359 /locus_tag="B565_1972" /note="Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]; Region: LipA; COG1075" /db_xref="CDD:31273" misc_feature <2209222..>2209359 /locus_tag="B565_1972" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" gene complement(2209699..2211672) /locus_tag="B565_1973" /db_xref="GeneID:10487890" CDS complement(2209699..2211672) /locus_tag="B565_1973" /codon_start=1 /transl_table=11 /product="Short-chain alcohol dehydrogenase-like protein" /protein_id="YP_004392625.1" /db_xref="GI:330829673" /db_xref="GeneID:10487890" /translation="MNYFITGGSGFIGRRLIKKLFQQHPDCIVYFLMRASHQDKLPEL FAFWNVDESRAVPVFGDMTQPLLGVSVEIQEQLIGKIDHFFHLAAIYDLNAKAGIQQQ VNTEGTRQAVQLAERLGAGQFHHCSSIAAAGLFDGLFREDMFDEAEHLDMPYFQTKHE AEGIVRNECTVPWRVYRPGIVVGDSNTGEMDKIDGPYYFFKTIQKLRRLLPPWMPAIG VEGGRINIVPVNFVVDAMEHIAHQEGEENKTFHLTDPNPMRVGDMLSTFSRAAHAPEP AIRINASLFNFIPRHLTAMLMTMAPVRRIRDAAIADLGLPKDVFRLISYPTRFDSRET QRVLKGTGIEVPPLHSYAWRLWDYWERHLDPELFIDRSLRGRVEGKVVLVTGATSGIG RATARKLAGAGANVVTIARDEQKIAETKAEFAELGLTIEIYQGDLSNLAQAEEITARI VADHGGVDILVNNAGRSIRRSIEDSFDRFHDLERTMQLNYFGALKVIMGVLPTMIEKK KGHIINISSIGVLTNAPRFSAYVASKSALDAWVRTAASEFADKGVSFSIINMPLVKTP MVAPTKVYEQVPMMTPEEAADLVCDTIINKHVRLATRLGVFGQVVHALAPRVAQVIMN TSFRTFADPKDGDKSKATADQVAVSTLIKGIHF" misc_feature complement(2209702..2211672) /locus_tag="B565_1973" /note="short chain dehydrogenase; Provisional; Region: PRK07201" /db_xref="CDD:180879" misc_feature complement(2210779..2211666) /locus_tag="B565_1973" /note="Pseudomonas fluorescens MupV-like, extended (e) SDRs; Region: MupV_like_SDR_e; cd05263" /db_xref="CDD:187573" misc_feature complement(order(2211130..2211141,2211199..2211201, 2211211..2211213,2211289..2211297,2211364..2211366, 2211406..2211414,2211568..2211576,2211637..2211648, 2211652..2211654)) /locus_tag="B565_1973" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187573" misc_feature complement(order(2211199..2211201,2211211..2211213, 2211289..2211291,2211361..2211363)) /locus_tag="B565_1973" /note="active site" /db_xref="CDD:187573" misc_feature complement(order(2211025..2211027,2211085..2211087, 2211133..2211135,2211211..2211213,2211289..2211291)) /locus_tag="B565_1973" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:187573" misc_feature complement(2209906..2210529) /locus_tag="B565_1973" /note="classical (c) SDRs; Region: SDR_c; cd05233" /db_xref="CDD:187544" misc_feature complement(order(2209975..2209980,2209984..2209995, 2210071..2210073,2210083..2210085,2210122..2210130, 2210209..2210211,2210278..2210286,2210362..2210370, 2210437..2210445,2210500..2210511,2210515..2210517)) /locus_tag="B565_1973" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187544" misc_feature complement(order(2210071..2210073,2210083..2210085, 2210122..2210124,2210206..2210208)) /locus_tag="B565_1973" /note="active site" /db_xref="CDD:187544" gene 2211921..2212493 /locus_tag="B565_1974" /db_xref="GeneID:10487891" CDS 2211921..2212493 /locus_tag="B565_1974" /codon_start=1 /transl_table=11 /product="poly(hydroxyalcanoate) granule associated protein" /protein_id="YP_004392626.1" /db_xref="GI:330829674" /db_xref="GeneID:10487891" /translation="MAKKLKALAGSVTDNQLTSTIKESTQQIWLAGLGAYAKAQEEGG KIFEALVQEGEALQAKTRQSADEKIAAVTDKTANTWGRLEQVFEDRVARAVASLGIPT RKDIDKLSKRMAELTDVVQQLLDAQEEEAPAAEAKPAAAKKPAARKPPVKKAPVAKAK EAVVEQAADLLSAAEDAVKEVKAKAESVLP" misc_feature 2211963..2212289 /locus_tag="B565_1974" /note="Poly(hydroxyalcanoate) granule associated protein (phasin); Region: Phasin; cl07863" /db_xref="CDD:195632" gene 2212588..2213775 /locus_tag="B565_1975" /db_xref="GeneID:10487892" CDS 2212588..2213775 /locus_tag="B565_1975" /codon_start=1 /transl_table=11 /product="phospholipase, patatin family" /protein_id="YP_004392627.1" /db_xref="GI:330829675" /db_xref="GeneID:10487892" /translation="MSTIAIALAGGGPLGGIYEIGACAALSDSINGLRLDHADIYVGV SSGAVVASALANGISPAKLVRILLSDDSGEMFDPATLLRPAFREYADRLTSIPPLAWQ SLTYYLAAPWKRSLFESLQGLSKAIPTGLFDNRGVDRTLTQFFSRPGRSNDFRQLRSR LFVVATELDTGHPVAFGSLGLDDVPISAAVQASAALPGLFPPSLINGRYYVDGALIKT LHASVALEEGADLVFCINPLVPYDADMADGTPTNLVDSGLPVVLAQTFRAIIHSRMHV GMDRYKHQYPDADALLFEPSSADGEMFFTNVFSYRDRRRLCEHAYQHTRRDLWQRRDE LAPVLAKHGLELNLAALADEDRTLLAPGIGSVAALDKSLELLQHWLAKRYRHGVRRSS PKE" misc_feature <2213041..2213571 /locus_tag="B565_1975" /note="Patatins and Phospholipases; Region: Patatin_and_cPLA2; cl11396" /db_xref="CDD:196212" gene 2213777..2214418 /locus_tag="B565_1976" /db_xref="GeneID:10487893" CDS 2213777..2214418 /locus_tag="B565_1976" /codon_start=1 /transl_table=11 /product="transcriptional reguator, TetR family" /protein_id="YP_004392628.1" /db_xref="GI:330829676" /db_xref="GeneID:10487893" /translation="MDRKPKRRTRERILTTALACFNRQGEPSVTTSAIAAEMEISQGN LYYHFHNKEEIVNALFCEFEQQMDRLLEAVSTPSDEPEDIWLFLHLMFEAIWQYRFLY YDIATLMSGYHQVEQRFSALLRRKEQTAIAICNHLQTVGLMEGTTQQMRTLAANVALV GTFWISYQRALHPKVDADIALGVFQVMQLVAPYLRADARAHLGALAHHYTDKV" misc_feature 2213777..2214361 /locus_tag="B565_1976" /note="Transcriptional regulator [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:31500" misc_feature 2213813..2213953 /locus_tag="B565_1976" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene 2214444..2215232 /locus_tag="B565_1977" /db_xref="GeneID:10487894" CDS 2214444..2215232 /locus_tag="B565_1977" /codon_start=1 /transl_table=11 /product="putative tetratricopeptide repeat family protein" /protein_id="YP_004392629.1" /db_xref="GI:330829677" /db_xref="GeneID:10487894" /translation="MTTSQLEFVPFPYVDAAYEYAGQKLADNWDRLHQGDAEPWPEDE QVQDAWRAYHAGDFARAVALGEAAGEAGLNVANKALVIHASYLLEDKYAKRAAFERAA SHAEKLQKRQPKNANAWYFHALALGRYSQVISISKALSQGIGDKIKASLEKALELAPD HAEAHIAFGAWHAEIVDKLGAMIGGLTYGAKKEESERHFKEALALIPESAIARMEYAN AQVMLHGKSRLKVAEALYAEAAECEPMDAMERLDVEAAREELED" gene complement(2215348..2216778) /locus_tag="B565_1978" /db_xref="GeneID:10487895" CDS complement(2215348..2216778) /locus_tag="B565_1978" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392630.1" /db_xref="GI:330829678" /db_xref="GeneID:10487895" /translation="MPLSEFISCVDTAWLRMDRPNNLMQIIGVLMFEGELDEARLRAG LRHTISVQPRFHQRAVLEGGSYYWRHDPDFDLDQHLKRVILPGEAGKLELEKLVADLA STPLNHQRPLWDMHLTDTSLGGQALVVRIHHAMGDGFSLVRAMLTMMDNTPEGAPRPP SPEPLDDSDDEDEEDCHQGSRLVRAGLKLTGSLWSKYVEVVTHPTKAVDYLKTGRDVA SELCNIATLGDDSPCRLRGKTTSTKRVAWSEQIDLPDIKAVGKVLGCSVNDLLIAATA GAFRHYLQEKGDDANKVKIRALVPVNMRAPDDEGALGNRFGLVALDLPLDVEHPLQRL YTVRDRMQALRTSLQPVVVLNLLHALGMAPNAVQQQAVELLTAKASAVITNVPGPQQT LYLAGAKLRQPLFWVPQSGDIGVGVSILSYDHKVQLGLITDKKLVPDPDRVVERFAVE FEQLLLLVLMEPELLFDPNGLDALLG" misc_feature complement(2215435..2216760) /locus_tag="B565_1978" /note="acyltransferase, WS/DGAT/MGAT; Region: acyl_WS_DGAT; TIGR02946" /db_xref="CDD:163081" misc_feature complement(2215972..2216760) /locus_tag="B565_1978" /note="Condensation domain; Region: Condensation; cl09290" /db_xref="CDD:197435" gene complement(2217034..2217366) /locus_tag="B565_1979" /db_xref="GeneID:10487896" CDS complement(2217034..2217366) /locus_tag="B565_1979" /codon_start=1 /transl_table=11 /product="putative polyhydroxyalkanoic acid system protein" /protein_id="YP_004392631.1" /db_xref="GI:330829679" /db_xref="GeneID:10487896" /translation="MFFNSLAGSSALSIIQISRQHPLGLAAARIAAEAIAADMSESYQ LDCEWADEEETELRFRGSGVHGTLTLDEDTLELEVHLGLMLLPVRSVLEQEILDYVDN RLPCPKRI" misc_feature complement(2217055..2217324) /locus_tag="B565_1979" /note="Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn); Region: PHA_gran_rgn; cl09865" /db_xref="CDD:158745" gene 2217626..2218354 /locus_tag="B565_1980" /db_xref="GeneID:10487897" CDS 2217626..2218354 /locus_tag="B565_1980" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392632.1" /db_xref="GI:330829680" /db_xref="GeneID:10487897" /translation="MTHQEHAHDDDSTLGRLYRQLKRVAALREQMRAHPEDQQDRDRL RQWQADRLGRTHRDLLESDRYGPAAEFFLTDLYGPGDCTRRDADVMRVMPTAERLLPE SGLKVLAQAIELDALSEELDYLMVVALRRIDGIDPITPDHYTIAYRAVGEQARREHQI ALVSELGMTLDRLARKPLLGATLKLVSGPAHLAGLGELFSFVERGYQVCHQMGRANEF LETIASRETAIMTALFNGDSSALG" gene complement(2218454..2219899) /locus_tag="B565_1981" /db_xref="GeneID:10487898" CDS complement(2218454..2219899) /locus_tag="B565_1981" /codon_start=1 /transl_table=11 /product="2-methylcitrate dehydratase PrpD" /protein_id="YP_004392633.1" /db_xref="GI:330829681" /db_xref="GeneID:10487898" /translation="MSANVDVNHRPDPDQVLVDIADYVCNHPITSEAALDTARYCLMD TLGCGLLALRFPECTKHLGPIVPGTLVPHGARVPGTQLCLDPVKAAWDIGAIIRWLDY NDTWLAAEWGHPSDNLGGILATADWLSRTRVAEGKAPLTMADVLVAMVKAHEIQGVLA LENSFNRVGLDHVVLVKVASTAVVTHMLGGTRDQVIDAVSQAWVDGQSLRTYRHAPNA GSRKSWAAGDATSRAVRLALITMSGEMGYPGVLSAPKWGFYDVLFKGNQFALHQGYGS YVMENVLFKISYPAEFHAQTAVECAMKLHGQVKGRLEEIDRIELTTHESAIRIISKVG ALNNPADRDHCLQYMVAVPLIFGRLIAEDYEDDVAADPRIDALRSKMVVQEDKRYSRE YLEADKRSIANAIQIFFKDGTHTAKVEVEYPVGHRRRREEGIPLLVDKFQHNLATRFP AKRVSDILALCQDGPRLAATPVHAFMDLLVI" misc_feature complement(2218457..2219896) /locus_tag="B565_1981" /note="MmgE/PrpD family; Region: MmgE_PrpD; cl00912" /db_xref="CDD:186254" misc_feature complement(2218457..2219860) /locus_tag="B565_1981" /note="2-methylcitrate dehydratase; Region: prpD; TIGR02330" /db_xref="CDD:131383" gene complement(2219910..2221037) /locus_tag="B565_1982" /db_xref="GeneID:10487899" CDS complement(2219910..2221037) /locus_tag="B565_1982" /codon_start=1 /transl_table=11 /product="2-methylcitrate synthase/citrate synthase II" /protein_id="YP_004392634.1" /db_xref="GI:330829682" /db_xref="GeneID:10487899" /translation="MGQQKPLGGAGLRGQSAGETSICTVGKSGTGLTYRGYDIKELAD SAQFEEVAYLLLKGELPGEQQLDAYKRELRRLRTLPLPLLEVLERIPADAHPMDVLRT GCSMLGDLEPEDGFEHEHEVADRLLAAFPGILIYWYKFSHEGIRIALDTDEECIGGHF LALLHQKAPSELERRVMHVSLILYAEHEFNASTFAARVCASTLSDMFSCITAAIGTLR GPLHGGANEAAMAMIEHWQDETQARRELLAKLAAKEKIMGFGHAIYRTSDPRNVIIKE WSAKLAEAVGDDRLYRVSCEAEKVMWEEKELFPNADFFHASAYHYMGIPTKLFTPIFV CSRVTGWCAHVMEQREHNRIIRPSADYVGPAPRHFVSLQQR" misc_feature complement(2219922..2221010) /locus_tag="B565_1982" /note="Citrate synthase (CS), citryl-CoA lyase (CCL), the C-terminal portion of the single-subunit type ATP-citrate lyase (ACL) and the C-terminal portion of the large subunit of the two-subunit type ACL. CS catalyzes the condensation of acetyl coenzyme A (...; Region: CS_ACL-C_CCL; cl00416" /db_xref="CDD:187898" misc_feature complement(2219967..2221007) /locus_tag="B565_1982" /note="Citrate synthase; Region: Citrate_synt; pfam00285" /db_xref="CDD:189486" misc_feature complement(order(2219970..2219972,2220027..2220029, 2220228..2220230,2220252..2220257,2220372..2220374, 2220468..2220470,2220477..2220479)) /locus_tag="B565_1982" /note="oxalacetate binding site [chemical binding]; other site" /db_xref="CDD:99853" misc_feature complement(order(2220027..2220029,2220108..2220110, 2220228..2220230,2220252..2220266,2220270..2220275, 2220372..2220377,2220468..2220470,2220477..2220479)) /locus_tag="B565_1982" /note="citrylCoA binding site [chemical binding]; other site" /db_xref="CDD:99853" misc_feature complement(order(2219979..2219981,2220102..2220104, 2220108..2220110,2220117..2220119,2220252..2220275, 2220354..2220356,2220363..2220365,2220372..2220380)) /locus_tag="B565_1982" /note="coenzyme A binding site [chemical binding]; other site" /db_xref="CDD:99853" misc_feature complement(order(2220102..2220104,2220255..2220257, 2220372..2220374)) /locus_tag="B565_1982" /note="catalytic triad [active]" /db_xref="CDD:99853" gene complement(2221048..2221935) /locus_tag="B565_1983" /db_xref="GeneID:10487900" CDS complement(2221048..2221935) /locus_tag="B565_1983" /codon_start=1 /transl_table=11 /product="PEP phosphonomutase and related enzyme" /protein_id="YP_004392635.1" /db_xref="GI:330829683" /db_xref="GeneID:10487900" /translation="MSSLSPSAGLRFRTALANEHPLQIVGTINAYMALMAERSGFQAL YLSGAGVANASYGLPDLGMTSLNDVLIDAERITAATRVPLLVDIDTGWGGAFNIARTI RAFERAGVAAVHMEDQVAQKRCGHRPNKAVVTLEEMCDRIKAAVDARENSEFVIMART DALAVEGMESALERTAAYVAAGADMIFAEAVTELAQYDQFKLAAKVPILANMTEFGKT ALFDKEQLAAHGVDMVLYPLSANRAANQAALNVYQHIRQDGHQRAVVETMQTRESLYD FLGYHHYEQTLDRLFTAKE" misc_feature complement(2221060..2221929) /locus_tag="B565_1983" /note="PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]; Region: PrpB; COG2513" /db_xref="CDD:32583" misc_feature complement(2221174..2221902) /locus_tag="B565_1983" /note="Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage. Known members are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate hydrolase (PPH), carboxyPEP mutase (CPEP mutase), oxaloacetate hydrolase (OAH), isocitrate...; Region: ICL_PEPM; cd00377" /db_xref="CDD:119340" misc_feature complement(order(2221177..2221185,2221189..2221197, 2221201..2221209,2221495..2221497,2221504..2221509, 2221516..2221518,2221525..2221530,2221615..2221617, 2221624..2221626,2221636..2221641,2221657..2221659, 2221699..2221704,2221711..2221716,2221720..2221725, 2221732..2221737,2221741..2221752,2221759..2221764, 2221771..2221776,2221789..2221791,2221810..2221818, 2221822..2221824,2221831..2221836,2221840..2221854, 2221858..2221869,2221873..2221875,2221894..2221896)) /locus_tag="B565_1983" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:119340" misc_feature complement(order(2221225..2221227,2221297..2221299, 2221303..2221305,2221369..2221371,2221459..2221461, 2221588..2221590,2221669..2221671,2221675..2221677, 2221756..2221758,2221789..2221797,2221801..2221803)) /locus_tag="B565_1983" /note="active site" /db_xref="CDD:119340" misc_feature complement(order(2221588..2221590,2221669..2221671, 2221675..2221677,2221756..2221758)) /locus_tag="B565_1983" /note="Mg2+/Mn2+ binding site [ion binding]; other site" /db_xref="CDD:119340" gene 2222083..2222709 /locus_tag="B565_1984" /db_xref="GeneID:10487901" CDS 2222083..2222709 /locus_tag="B565_1984" /codon_start=1 /transl_table=11 /product="paraquat-inducible protein A" /protein_id="YP_004392636.1" /db_xref="GI:330829684" /db_xref="GeneID:10487901" /translation="MMEPGSVIVCPACDLLIQRKALPLRRHAHCPRCHQHLYGRYAFR PSQLMALTITGFLLLPSAFFEPLIYLRLAGVNTDADLLRGILVLFGEGEWWVASLVLW CAVLAPVGLLAGIFALASGLAKRWHILPVTLKLVEVFRHWAMLEVYIVSLLVALFKLI DIADVRLGGGLLSLGILMLLNMTLLILFDPAPYWARIPLKEPEHDQRP" misc_feature 2222218..2222673 /locus_tag="B565_1984" /note="Paraquat-inducible protein A; Region: PqiA; pfam04403" /db_xref="CDD:190970" gene 2222693..2223295 /locus_tag="B565_1985" /db_xref="GeneID:10487902" CDS 2222693..2223295 /locus_tag="B565_1985" /codon_start=1 /transl_table=11 /product="paraquat-inducible protein A-like protein" /protein_id="YP_004392637.1" /db_xref="GI:330829685" /db_xref="GeneID:10487902" /translation="MTSAREMGLCRCHTCGLLVRYQAGAVCPRCRSKLQVRIPRSLAW SWGLLALATFMLLPANLLPITHFYNKGLLQSDTIFSGIMMLYRSKMSGIATIVLTASI LVPVGKILGLGWICWQLQRAKPVRRKRQLVMYRVIDFIGRWSMLDLFVISLMVALVDR GVLLSVRAGPGATAFAGVVVLTMMSARMLDTRLLWDKAAR" misc_feature 2222852..2223292 /locus_tag="B565_1985" /note="Paraquat-inducible protein A; Region: PqiA; pfam04403" /db_xref="CDD:190970" gene 2223351..2225903 /locus_tag="B565_1986" /db_xref="GeneID:10487903" CDS 2223351..2225903 /locus_tag="B565_1986" /codon_start=1 /transl_table=11 /product="paraquat-inducible protein B" /protein_id="YP_004392638.1" /db_xref="GI:330829686" /db_xref="GeneID:10487903" /translation="MIGAEPVIEKRRWLSPVWLLPLIALLLAGGFLYQQVLSRGQLIQ INFAQGNGILPGKTQVRYQGVAIGVVQELELAEDGRKIAVMAKIDSRARPLIRKGSDF WLVSPKASLTEISGLDTLVSGNYINLQPGRESNPLEETFDALEGPPPGYQAQGRMLHL TADSLGSVGIGAKLYFRGIEVGSVINTRLGQDNQNVILDLVIEPRFEHLVKADTRFWN ISGIKGSFSLAGVSVEAGSLTSILSGGIAFDSPKDSPEPEKGQTFVLYKGLAEAARGA RIDIAAGDLPVKEGMPILYEGIEIGRIDPIRLTDKGRVVTALINPEQAYRITDKSQLV WESVSLSAAGVQHADRLLSGPAIRLDYVVGKSVQKMTLTDRAPQSGTKVTLQADDLAG LNQDAPVWYKGLQVGRISQLTLDARGNASVELVMAPNYGHLLNRARFYRAAPLQIDAD LSGIKVETSPASAWLGGGIKLIQASSGERINRLYPSQELALLGTRDAKPQRWLLKAGQ ADGIGIGSPVLYLGLEAGKVKQLRAAKEGVEIELEIDGVYAPLLAQQPQFWKKPAIDT KVRVDGVQVKVGNLGTLLRGAIEFDRLANGRSSHQLFDSREQAKAKVRQLSLVAESNP GLGIGSPIRYRGVDIGKIEEIELEPSLGQVIFKAELDGHYAERFLQSGARFTLVQAKL GLGGVAHLDTLIKGAFVEAQPGKGAGKNRFPLSQVGPVGLALTLKSPSVNGLSVGSPL LFRKMVVGSVTKVALARDGSEVVIDVNVDQEYAHLVRANSRFWNVSGVKADIGLTGGT IEVETVQSLLAGGIAFNTPEREMGPTVKAGHSYPLYGKAEKEWLEWSPRIQP" misc_feature 2223363..2225006 /locus_tag="B565_1986" /note="Paraquat-inducible protein B [General function prediction only]; Region: PqiB; COG3008" /db_xref="CDD:32825" misc_feature 2223465..2223743 /locus_tag="B565_1986" /note="mce related protein; Region: MCE; cl03606" /db_xref="CDD:186584" misc_feature 2223822..2224052 /locus_tag="B565_1986" /note="mce related protein; Region: MCE; cl03606" /db_xref="CDD:186584" misc_feature 2224488..>2224640 /locus_tag="B565_1986" /note="mce related protein; Region: MCE; cl03606" /db_xref="CDD:186584" misc_feature <2224824..>2225285 /locus_tag="B565_1986" /note="paraquat-inducible protein B; Provisional; Region: PRK10807" /db_xref="CDD:182747" misc_feature 2224860..>2225003 /locus_tag="B565_1986" /note="mce related protein; Region: MCE; cl03606" /db_xref="CDD:186584" misc_feature 2225223..2225462 /locus_tag="B565_1986" /note="mce related protein; Region: MCE; cl03606" /db_xref="CDD:186584" misc_feature 2225511..>2225696 /locus_tag="B565_1986" /note="mce related protein; Region: MCE; cl03606" /db_xref="CDD:186584" gene 2226048..2227478 /locus_tag="B565_1987" /db_xref="GeneID:10487904" CDS 2226048..2227478 /locus_tag="B565_1987" /codon_start=1 /transl_table=11 /product="ribosomal RNA small subunit methyltransferase F" /protein_id="YP_004392639.1" /db_xref="GI:330829687" /db_xref="GeneID:10487904" /translation="MHDNTFLPDYFLRHIAAIMPAHLSMDDFVASCRRPLRRSIRVNT LKIAVSDFVALMEPLGWQLDPVPWCDTGFWLTRSDETVPLGNTAEHLSGLFYIQEASS MLPVMALFASDKIKADGMLLDAAAAPGSKTTQIAALMNNQGMLVANEFSSSRLKVLSA NIQRCGVTNVGMTHFDAKVFGQWLPETFDAILLDAPCSGEGTVRKDEDALRNWSIESI DEIAAVQQGLLESAFHALKPGGVLVYSTCTLSEQENQAVCQSLLDKFGDALSFDSLAD LFPHAEQACTSEGYLHVWPQIFDSEGFFVARLRKHHSVPNTMFKPGKLGKFPFAPLPA KEAEPMLREIEANFGVAPQGQLFGRNDEIWLFPLRFDQVQGKLRFDRIGIKLAETFKK GYRLTHEWALAYGDKASKGVVELDSANAREFMMGRDVWPEQDAGAGEVIVRYQGHTLG MGKWVGSRVKNALPRELVRDNNLFNA" misc_feature 2226057..2227466 /locus_tag="B565_1987" /note="rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed; Region: yebU; PRK11933" /db_xref="CDD:183387" misc_feature 2226165..2226977 /locus_tag="B565_1987" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" misc_feature 2227068..2227457 /locus_tag="B565_1987" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3270" /db_xref="CDD:33081" gene complement(2227705..2227989) /locus_tag="B565_1988" /db_xref="GeneID:10487905" CDS complement(2227705..2227989) /locus_tag="B565_1988" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392640.1" /db_xref="GI:330829688" /db_xref="GeneID:10487905" /translation="MSQEMIVREEQEAGPQNNAERQRQHVKRKQETHTRLQCWISNRH AERLAALGIHLEDSQASLIEQAIDLLYQYELGREPPFENRVATQLEETVE" misc_feature complement(2227774..2227986) /locus_tag="B565_1988" /note="Replication regulatory protein RepB; Region: RepB-RCR_reg; cl11673" /db_xref="CDD:187137" gene complement(2228151..2229092) /locus_tag="B565_1989" /db_xref="GeneID:10487906" CDS complement(2228151..2229092) /locus_tag="B565_1989" /codon_start=1 /transl_table=11 /product="phage integrase family protein" /protein_id="YP_004392641.1" /db_xref="GI:330829689" /db_xref="GeneID:10487906" /translation="MRSAKADSTLNAYQADTRIFVFWCQLHGLDPLQTTHHDIMNFLA DQADGVLANWVWLDKEEGKGELRNGEPRKPATLVRRLAGIRYAFKQKGIHPMPTEHPE IKEMMRGIVRLGDNRKRKTGALTLQPLTQVLDGIDTGDLAGLRDHTLLLLMFSGALRR SEAARIEVSDLDFVGQGIRLRLKPSKHQLHETEIALIPGKQYCPVSALQKWLHKSRIS EGPLFRRMNRWGQLMAEPLGPQGINLMIKRRTGQTIDDLYVSGHSLRRGFITSAVTAG KPMNKIIEVTRHKDMRTLQEYFDDAHKFSDHALDGLL" misc_feature complement(2228157..2229074) /locus_tag="B565_1989" /note="Cre recombinase, C-terminal catalytic domain. Cre-like recombinases belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The bacteriophage P1 Cre...; Region: INT_Cre; cd00799" /db_xref="CDD:29500" misc_feature complement(order(2228202..2228204,2228307..2228315, 2228364..2228366,2228370..2228372,2228412..2228420, 2228610..2228618,2228658..2228660,2228856..2228858, 2228865..2228870,2229039..2229041,2229060..2229062, 2229066..2229071)) /locus_tag="B565_1989" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29500" misc_feature complement(order(2228157..2228162,2228166..2228174, 2228277..2228279,2228289..2228291,2228628..2228633, 2228715..2228717,2228766..2228771,2228775..2228777, 2228781..2228783,2228970..2228975,2228982..2228984)) /locus_tag="B565_1989" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29500" misc_feature complement(order(2228202..2228204,2228229..2228231, 2228298..2228300,2228307..2228309,2228535..2228537, 2228616..2228618)) /locus_tag="B565_1989" /note="Int/Topo IB signature motif; other site" /db_xref="CDD:29500" misc_feature complement(order(2228202..2228204,2228298..2228300, 2228307..2228309,2228535..2228537,2228616..2228618)) /locus_tag="B565_1989" /note="active site" /db_xref="CDD:29500" gene complement(2229281..2229445) /locus_tag="B565_1990" /db_xref="GeneID:10487907" CDS complement(2229281..2229445) /locus_tag="B565_1990" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392642.1" /db_xref="GI:330829690" /db_xref="GeneID:10487907" /translation="MLGAFYISNTKLITHLKINLAQRYLSPTHSTRSSTQNWVNDIPM FRFFTVVEGY" gene complement(2229459..2230238) /locus_tag="B565_1991" /db_xref="GeneID:10487908" CDS complement(2229459..2230238) /locus_tag="B565_1991" /codon_start=1 /transl_table=11 /product="putative deoxyribonuclease YcfH" /protein_id="YP_004392643.1" /db_xref="GI:330829691" /db_xref="GeneID:10487908" /translation="MLLVDSHCHLDRLSYGSKQTSLADVLAKAAKLDVGYFLCVSVTQ AKFPTMLEAIAPYPQVFASCGVHPLNQEPGVDAELLLKQAADPRVVAIGETGLDYFYS PENKDVQQASFREHIRVARALNKPLIIHTRDAQQDTLQIMREEGADQVGGVLHCFTES LEMAQAAMAMGFYISISGIATFKNASALQEVVKALPLDRLLVETDSPYLAPVPHRGRE NEPAFVRDVAQFIADLRHIPLDELAEATSRNFFELFKLAKK" misc_feature complement(2229471..2230232) /locus_tag="B565_1991" /note="putative deoxyribonuclease YjjV; Provisional; Region: PRK11449" /db_xref="CDD:171118" misc_feature complement(2229474..2230232) /locus_tag="B565_1991" /note="TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity; Region: TatD_DNAse; cd01310" /db_xref="CDD:30053" misc_feature complement(order(2229624..2229626,2229774..2229776, 2229849..2229851,2230212..2230214,2230218..2230220)) /locus_tag="B565_1991" /note="active site" /db_xref="CDD:30053" gene complement(2230264..2231211) /locus_tag="B565_1992" /db_xref="GeneID:10487909" CDS complement(2230264..2231211) /locus_tag="B565_1992" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit delta'" /protein_id="YP_004392644.1" /db_xref="GI:330829692" /db_xref="GeneID:10487909" /translation="MYPWLIPDWHALSQTAQSGRLGHAWLLLGDPGLGKEQLAERLAR LHLCQQPDRGEPCGQCHSCQLFDKGNHPDLGTITRDSKTIGVEAIREICTRLQGSAQL GRGKVVIIPDAERMTESAANALLKTLEEPAGDSLLLLIASQVSRLLPTILSRCHKHVC QLPAEGETVRWLAEQGHQATLAQVRICQGAPLRVLDYIEQQQDGTRRELLEQFVALSQ SPVKATALCSQLGQETQVRLHWLQLFLCDALKTQAGCGHHLLAMPDLAILSQRLAEQH SSEKLLEAEQDLVALKAACQPGQLSNPTIHLMNWLSRWL" misc_feature complement(2230633..2231187) /locus_tag="B565_1992" /note="DNA polymerase III, delta' subunit; Region: holB; TIGR00678" /db_xref="CDD:161993" misc_feature complement(2230732..2231184) /locus_tag="B565_1992" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(2231104..2231127) /locus_tag="B565_1992" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(2230783..2230785,2230879..2230881, 2231101..2231124)) /locus_tag="B565_1992" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(2230876..2230893) /locus_tag="B565_1992" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(2230750..2230752) /locus_tag="B565_1992" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature complement(2230270..2230617) /locus_tag="B565_1992" /note="C terminal; Region: DNApol3-delta_C; pfam09115" /db_xref="CDD:192213" gene complement(2231196..2231837) /locus_tag="B565_1993" /db_xref="GeneID:10487910" CDS complement(2231196..2231837) /locus_tag="B565_1993" /codon_start=1 /transl_table=11 /product="Thymidylate kinase" /protein_id="YP_004392645.1" /db_xref="GI:330829693" /db_xref="GeneID:10487910" /translation="MSKFIVIEGLEGAGKSSAVRYVTDYLQRHGINRIECTREPGGTP LAERMRAIVKEVHDERLTIEAELLLMYASRVQLVETRIKPALADGVWVVGDRHDLSSQ AYQGGGRGIDAQLIGAIKQAVLGNFKPDLTLYLDIDPALGLQRARHRGELDRIELEQL SFFERTRTRYLELAAKDDSIVVIDAAQTPEQVKAAIERALDHYLSNEPLCIPG" misc_feature complement(2231226..2231837) /locus_tag="B565_1993" /note="thymidylate kinase; Validated; Region: tmk; PRK00698" /db_xref="CDD:179089" misc_feature complement(2231235..2231831) /locus_tag="B565_1993" /note="Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor. TMPK represents the rate-limiting...; Region: TMPK; cd01672" /db_xref="CDD:30190" misc_feature complement(order(2231391..2231393,2231526..2231528, 2231550..2231555,2231616..2231618,2231628..2231630, 2231790..2231792)) /locus_tag="B565_1993" /note="TMP-binding site; other site" /db_xref="CDD:30190" misc_feature complement(order(2231283..2231285,2231403..2231405, 2231787..2231789)) /locus_tag="B565_1993" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:30190" gene complement(2231837..2232838) /locus_tag="B565_1994" /db_xref="GeneID:10487911" CDS complement(2231837..2232838) /locus_tag="B565_1994" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392646.1" /db_xref="GI:330829694" /db_xref="GeneID:10487911" /translation="MKFNRLYTLLAGAALTVAAAGGYVHYKWQQVETLTNKGPTRLFT VEKGAHAARLIAELGEGETSPWAVRLWLRSHPELVAIKSGTYEIKEGAPLKETLSLFA SGKEFHFSLTFVEGSRFEDWQKQLSSAPYLERLTVEQSEADLAQELGIENGKLEGWFL PETYAYTTHASDLSILRRAHQDMETFLQQSWEKRQANLPYKTPYEALIMASIIEKETG QPDERAQIASVFVNRLRLGMKLQTDPTVIYGVKDRYDGNIRRSDLTDKNPYNTYVIDG LPPTPIAMPGKASIEAALNPKSTDYLYFVAKGGGAHYFSKTLDEHNRAVREYILKKP" misc_feature complement(2231855..2232712) /locus_tag="B565_1994" /note="YceG-like family; Region: YceG; pfam02618" /db_xref="CDD:190367" misc_feature complement(2231864..2232598) /locus_tag="B565_1994" /note="proteins similar to Escherichia coli yceG; Region: yceG_like; cd08010" /db_xref="CDD:153433" misc_feature complement(order(2231864..2231866,2231873..2231878, 2231885..2231887,2231906..2231911,2232050..2232052, 2232059..2232061,2232110..2232112,2232116..2232118, 2232503..2232505,2232512..2232517,2232536..2232538, 2232548..2232550,2232575..2232592,2232596..2232598)) /locus_tag="B565_1994" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:153433" gene complement(2232828..2233634) /locus_tag="B565_1995" /db_xref="GeneID:10487912" CDS complement(2232828..2233634) /locus_tag="B565_1995" /codon_start=1 /transl_table=11 /product="4-amino-4-deoxychorismate lyase" /protein_id="YP_004392647.1" /db_xref="GI:330829695" /db_xref="GeneID:10487912" /translation="MLINGMKLDTISAHDRGLAYGDGHFTTMAVREGRVLQWPAHLAR LQQANNRLGLVEPDWDLLTREVEEMVADQPQCVAKVILTRGEGGRGYDGSGCQHTTRI VTLAPFPTHYGQWQQEGIEMVVCRQRIGDAPMLAGLKTLNRLEQVLLKSELVSRNAVE GIVLNSRGFLIEGVSANLFWRRGKTVFTPDLARGGVDGIMRRQVMAMLKQMSIELRVV EAPLESLWQAEEVWLTNTLMGIVPVNGIEDIHYPPAVLSRRLQERLVIEV" misc_feature complement(2232843..2233592) /locus_tag="B565_1995" /note="ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate. Based on the information available from the crystal structure, most...; Region: ADCL_like; cd01559" /db_xref="CDD:29570" misc_feature complement(2232843..2233514) /locus_tag="B565_1995" /note="Aminotransferase class IV; Region: Aminotran_4; pfam01063" /db_xref="CDD:189826" misc_feature complement(order(2233119..2233121,2233218..2233220, 2233503..2233505)) /locus_tag="B565_1995" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:29570" misc_feature complement(2233218..2233220) /locus_tag="B565_1995" /note="catalytic residue [active]" /db_xref="CDD:29570" gene complement(2233703..2234896) /locus_tag="B565_1996" /db_xref="GeneID:10487913" CDS complement(2233703..2234896) /locus_tag="B565_1996" /codon_start=1 /transl_table=11 /product="beta-ketoacyl-acyl carrier protein synthase II" /protein_id="YP_004392648.1" /db_xref="GI:330829696" /db_xref="GeneID:10487913" /translation="MGNTAESSWQALLNGQSGISLIEHFDASEFATRFAGLVKDFDPE QYGINRKDARKMDLFIQYGIAAGMQALDDSGLTINEENAERVGVAIGSGIGGLGLIEQ NHESLVNGGPRKISPFFVPSTIINMVSGHLSIMKGMQGPNIAVTTACTTGTHAIGMAG RMIAYGDADVMVAGGAEKASTAMGMGGFAAAKALSNRNDEPQKASRPWDKDRDGFVLG DGAGVLVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTAPPADGNGGARAMKNAIKDA GIAPEQIGYINAHGTSTPLGDVAELRGMKSVFGEHAKSLMVSSTKSMTGHLLGAAGAI EAIITVLALRDQVAPPTINLDNPDDECDLDLVPHVAKPGSFEYALSNSFGFGGTNGSL IFKRV" misc_feature complement(2233715..2234896) /locus_tag="B565_1996" /note="Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen...; Region: KAS_I_II; cd00834" /db_xref="CDD:29421" misc_feature complement(2233706..2234893) /locus_tag="B565_1996" /note="3-oxoacyl-(acyl carrier protein) synthase II; Reviewed; Region: PRK07314" /db_xref="CDD:180925" misc_feature complement(order(2233733..2233735,2233739..2233741, 2234096..2234098,2234138..2234152,2234324..2234329, 2234336..2234341,2234402..2234404,2234411..2234416, 2234423..2234425,2234459..2234467,2234471..2234473, 2234477..2234479,2234495..2234497,2234507..2234509, 2234519..2234521,2234537..2234539,2234573..2234578, 2234582..2234584,2234594..2234599,2234618..2234620)) /locus_tag="B565_1996" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29421" misc_feature complement(order(2233919..2233921,2234030..2234032, 2234450..2234452)) /locus_tag="B565_1996" /note="active site" /db_xref="CDD:29421" gene complement(2235027..2235263) /locus_tag="B565_1997" /db_xref="GeneID:10487914" CDS complement(2235027..2235263) /locus_tag="B565_1997" /codon_start=1 /transl_table=11 /product="acyl carrier protein" /protein_id="YP_004392649.1" /db_xref="GI:330829697" /db_xref="GeneID:10487914" /translation="MSNIEERVKKIIIEQLGVKEEDVKNAASFVDDLGADSLDTVELV MALEEEFDTEIPDEEAEKITTVQAAIDYITANQE" misc_feature complement(2235030..2235263) /locus_tag="B565_1997" /note="Phosphopantetheine attachment site; Region: PP-binding; cl09936" /db_xref="CDD:195933" gene complement(2235422..2236156) /locus_tag="B565_1998" /db_xref="GeneID:10487915" CDS complement(2235422..2236156) /locus_tag="B565_1998" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] reductase" /protein_id="YP_004392650.1" /db_xref="GI:330829698" /db_xref="GeneID:10487915" /translation="MSFTDKVVLVTGASRGIGRAIAETFVARGAKVVGTATSESGAEA ISAYLGDNGCGMALNVTSQESIEAVFAAIKARFGDIDILINNAGITRDNLLMRMKDDE WNEIIDTNLTSLYRLSKPVLRAMMKKRHGRIISIGSVVGTMGNAGQVNYAAAKAGLVG FTKSLAREVASRGITVNAVAPGFIETDMTRALNDDQRAGIMSQVPAARLGDPKEIAAA VVFLASDEAAYITGETLHVNGGMYMV" misc_feature complement(2235425..2236156) /locus_tag="B565_1998" /note="3-ketoacyl-(acyl-carrier-protein) reductase; Validated; Region: fabG; PRK05557" /db_xref="CDD:180126" misc_feature complement(2235431..2236141) /locus_tag="B565_1998" /note="beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs; Region: BKR_SDR_c; cd05333" /db_xref="CDD:187594" misc_feature complement(order(2235593..2235601,2235605..2235607, 2235611..2235616,2235692..2235694,2235704..2235706, 2235743..2235751,2235830..2235832,2235890..2235901, 2235977..2235985,2236046..2236051,2236106..2236117, 2236121..2236123)) /locus_tag="B565_1998" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187594" misc_feature complement(order(2235431..2235433,2235437..2235475, 2235482..2235484,2235494..2235499,2235503..2235508, 2235515..2235517,2235524..2235535,2235539..2235547, 2235608..2235610,2235644..2235649,2235653..2235670, 2235674..2235679,2235686..2235691,2235698..2235703, 2235710..2235733,2235779..2235781,2235788..2235793, 2235800..2235805,2235809..2235814,2235821..2235826, 2235836..2235838,2235845..2235850,2235857..2235865, 2235869..2235880,2235956..2235958,2236073..2236075, 2236085..2236087)) /locus_tag="B565_1998" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:187594" misc_feature complement(order(2235653..2235658,2235662..2235670, 2235674..2235679,2235686..2235691,2235698..2235703, 2235710..2235736,2235779..2235781,2235788..2235793, 2235800..2235802,2235809..2235814,2235821..2235826, 2235836..2235838,2235845..2235850,2235857..2235859, 2235863..2235865,2235869..2235877)) /locus_tag="B565_1998" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187594" misc_feature complement(order(2235692..2235694,2235704..2235706, 2235743..2235745,2235827..2235829)) /locus_tag="B565_1998" /note="active site" /db_xref="CDD:187594" gene complement(2236170..2237105) /locus_tag="B565_1999" /db_xref="GeneID:10487916" CDS complement(2236170..2237105) /locus_tag="B565_1999" /codon_start=1 /transl_table=11 /product="Malonyl CoA-acyl carrier protein transacylase" /protein_id="YP_004392651.1" /db_xref="GI:330829699" /db_xref="GeneID:10487916" /translation="MTQFAIAFPGQGSQSVGMLTELAEQHAVIKETFAEASQVLGYDL FALVMDGPVEDLNKTWRTQPALLTASVALWRLWQQQGGATPAMMAGHSLGEYSALVCS GALDFADAVKLVELRGLAMQEAVPEGTGAMAAIIGLDNESIAANCEKAAHGQVVSPVN FNSPGQVVIAGHKEAVERANVLMKESGAKRALPLPVSVPSHCALMKPAAEKLAAALDG IEIKVPTIAVINNVDVSCEQDPAAIKQALVRQLFSPVRWTETVEQMANEGVTLEIEMG PGKVLTGLAKRIDKRVEGIHANDAASFEQALAQIK" misc_feature complement(2236179..2237105) /locus_tag="B565_1999" /note="Acyl transferase domain; Region: Acyl_transf_1; cl08282" /db_xref="CDD:186816" misc_feature complement(2236233..2237102) /locus_tag="B565_1999" /note="malonyl CoA-acyl carrier protein transacylase; Region: fabD; TIGR00128" /db_xref="CDD:188028" gene complement(2237177..2238136) /locus_tag="B565_2000" /db_xref="GeneID:10487917" CDS complement(2237177..2238136) /locus_tag="B565_2000" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase" /protein_id="YP_004392652.1" /db_xref="GI:330829700" /db_xref="GeneID:10487917" /translation="MHSKILGTGSYLPSSVRTNADLEQMVETSDEWIVERTGIRERRI AGADETVATLSYQAALRALESAGLTAADLDMIVLATTSAENAFPAAACELQGLLGVPG IPAFDVAAACAGFTYALSIADQFVKSGAARHVLVVGADVLSRMCDPQDRGTIILFGDG AGAVIVGASETPGILSTHLHADGRYGELLKLPQPRRGMPGAELEAYMYMKGNDVFKVA VTRLSEIVTETLAAAGIEPSELDWLVPHQANFRIISATAKKLGMSLDKVVLTLDKHGN TSAASVPVAFDEGVRDGRIKPGQLVLLEAFGGGFAWGSALVRL" misc_feature complement(2237180..2238136) /locus_tag="B565_2000" /note="3-oxoacyl-(acyl carrier protein) synthase III; Reviewed; Region: PRK09352" /db_xref="CDD:181792" misc_feature complement(2237186..2238133) /locus_tag="B565_2000" /note="Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl...; Region: KAS_III; cd00830" /db_xref="CDD:29417" misc_feature complement(order(2237210..2237212,2237564..2237569, 2237585..2237602,2237705..2237707,2237762..2237767, 2237774..2237779,2237786..2237788,2237810..2237830, 2237852..2237854,2237861..2237863,2237888..2237890, 2237894..2237896)) /locus_tag="B565_2000" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29417" misc_feature complement(order(2237309..2237311,2237399..2237401, 2237801..2237803)) /locus_tag="B565_2000" /note="active site" /db_xref="CDD:29417" misc_feature complement(2237390..2237392) /locus_tag="B565_2000" /note="CoA binding pocket [chemical binding]; other site" /db_xref="CDD:29417" gene complement(2238144..2239163) /locus_tag="B565_2001" /db_xref="GeneID:10487918" CDS complement(2238144..2239163) /locus_tag="B565_2001" /codon_start=1 /transl_table=11 /product="phosphate acyltransferase" /protein_id="YP_004392653.1" /db_xref="GI:330829701" /db_xref="GeneID:10487918" /translation="MSTQTVALDIMGGDIGPSETVPAAVQALSLLPQLKLILVGDQHQ TSSLLQQHGLLNHPRVRFVHASQVVGMGDKPIVALRTLKDSSMRVVLNLVKAGEADAC VSAGNTGALMAMAKCVLKSLPGVDRPALIKALPTLSGKRTVMLDLGANVSCDADTLLQ FAVMGSVVAEKVEGIASPRVALLNIGEEEIKGNDLVRHSAELLRQCHALNYVGFVEGD RIFSGDSDVIVCDGFVGNVALKTAEGVVRMMAQLAGYPRKKRTFLGRIAGFMFKRRFS YLNPDQYNGASLLGLRGIVVKSHGRAERRALCNAILLAAQEAKHQLPLQIADRLEAVF SDRDL" misc_feature complement(2238165..2239151) /locus_tag="B565_2001" /note="Phosphate acetyl/butaryl transferase; Region: PTA_PTB; cl00390" /db_xref="CDD:193798" gene complement(2239173..2239340) /locus_tag="B565_2002" /db_xref="GeneID:10487919" CDS complement(2239173..2239340) /locus_tag="B565_2002" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L32" /protein_id="YP_004392654.1" /db_xref="GI:330829702" /db_xref="GeneID:10487919" /translation="MAVQQNRKTRAKRGMRRSHDALTTAALTVDQTSGEIHRRHHVTA DGFYRGKKVIA" misc_feature complement(2239179..2239340) /locus_tag="B565_2002" /note="Ribosomal L32p protein family; Region: Ribosomal_L32p; cl09115" /db_xref="CDD:195795" gene complement(2239360..2239881) /locus_tag="B565_2003" /db_xref="GeneID:10487920" CDS complement(2239360..2239881) /locus_tag="B565_2003" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392655.1" /db_xref="GI:330829703" /db_xref="GeneID:10487920" /translation="MQKVKLPVKVDPVRSALKLLDYIGIVEKSQMPRLEESTAGLQSD IDVSLHFGKDVQKLTVMKGTAHAKVDLVCQRCGETFEHLCEAEFIYTPLFERTNEEEL PEAYEPIELDENGEIDLHQILEDELILSLPQVAMHSLDACPRGNMEMTWGEIEPADER PNPFAVLEELKRK" misc_feature complement(2239366..2239881) /locus_tag="B565_2003" /note="Uncharacterized ACR, COG1399; Region: DUF177; cl00616" /db_xref="CDD:193886" gene 2240001..2240582 /locus_tag="B565_2004" /db_xref="GeneID:10487921" CDS 2240001..2240582 /locus_tag="B565_2004" /codon_start=1 /transl_table=11 /product="Septum formation protein Maf" /protein_id="YP_004392656.1" /db_xref="GI:330829704" /db_xref="GeneID:10487921" /translation="MPQNLLLASTSRYRKALLEKLGLPFECAAPDVDEQPLAGESAEA LVARLARAKADAIAQHRDHGLIIGSDQVCVCNNHILGKPGTIDNAIAQLMEAQGRSVT FYTGLCVLNAATNEIHQLIEPFTVHFRDLDESAIRRYVEAELPLDCAGSFKCEGMGIV LFKGLEGRDPNALIGLPLIGLIELLERHGIALP" misc_feature 2240013..2240501 /locus_tag="B565_2004" /note="Nucleotide binding protein Maf. Maf has been implicated in inhibition of septum formation in eukaryotes, bacteria and archaea, but homologs in B.subtilis and S.cerevisiae are nonessential for cell division. Maf has been predicted to be a nucleotide- or...; Region: Maf; cd00555" /db_xref="CDD:29954" misc_feature order(2240025..2240027,2240040..2240042,2240100..2240102, 2240157..2240159,2240208..2240210,2240244..2240246) /locus_tag="B565_2004" /note="active site" /db_xref="CDD:29954" misc_feature order(2240139..2240141,2240346..2240363) /locus_tag="B565_2004" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29954" gene complement(2240683..2241345) /locus_tag="B565_2005" /db_xref="GeneID:10487922" CDS complement(2240683..2241345) /locus_tag="B565_2005" /codon_start=1 /transl_table=11 /product="HAD-superfamily hydrolase" /protein_id="YP_004392657.1" /db_xref="GI:330829705" /db_xref="GeneID:10487922" /translation="MQDIRLAIFDWDGTLMDSVGRIVACVQGAARDCELAVPAPAQIR QIIGLSLDVAMSRLFPLSSGSGSAFDERQIAALIDRYRHHYLHDATPSPLFAGAGELL HDWRSRGLQLAVATGKSRRGLDGVLDETGLRPLFVTSRGADEARSKPDPLMLEQILDE LGLSPRQAVMIGDSVHDMAMAEAIAMPRIGVTWGVDSRDALSRHGPVAVVDSMAALRG LL" misc_feature complement(2240686..2241345) /locus_tag="B565_2005" /note="Predicted phosphatases [General function prediction only]; Region: Gph; COG0546" /db_xref="CDD:30892" misc_feature complement(2240773..2241099) /locus_tag="B565_2005" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature complement(2240998..2241000) /locus_tag="B565_2005" /note="motif II; other site" /db_xref="CDD:119389" gene complement(2241345..2242328) /locus_tag="B565_2006" /db_xref="GeneID:10487923" CDS complement(2241345..2242328) /locus_tag="B565_2006" /codon_start=1 /transl_table=11 /product="23S rRNA pseudouridylate synthase C" /protein_id="YP_004392658.1" /db_xref="GI:330829706" /db_xref="GeneID:10487923" /translation="MQPRGAGSVKIRAMTQIQQQVQLLTIEAEHDGQRIDNFLKTQLK GVPKSLIYRILRKGEVRVNKKRIKPEYKLCAGDEVRVPPVRVAEKNELPSANLGVIQR LESQILFEDDAMIVLNKPSGMAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTS GVLLVAKKRSALRSLHEQLRVKTMRKQYLALVRGKWQAHVKVVNAPLRKNDLQSGERV VRVSADGKPSETRFRIVRQFAEATLVECSPITGRTHQIRVHTLHAGHPIACDDKYGEA AFDEKMRSQGLKRLFLHAWKLSFTHPADGREMQVEAPLAPELDNFLNGLPR" misc_feature complement(2241354..2242235) /locus_tag="B565_2006" /note="23S rRNA pseudouridylate synthase C; Provisional; Region: PRK11025" /db_xref="CDD:182909" misc_feature complement(2242092..2242232) /locus_tag="B565_2006" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cl09940" /db_xref="CDD:186878" misc_feature complement(2241432..2241989) /locus_tag="B565_2006" /note="PseudoU_synth_RsuA/RluD: Pseudouridine synthase, RsuA/RluD family. This group is comprised of eukaryotic, bacterial and archeal proteins similar to eight site specific Escherichia coli pseudouridine synthases: RsuA, RluA, RluB, RluC, RluD, RluE, RluF...; Region: PseudoU_synth_RluCD_like; cd02869" /db_xref="CDD:30029" misc_feature complement(order(2241558..2241560,2241861..2241872)) /locus_tag="B565_2006" /note="active site" /db_xref="CDD:30029" gene 2242712..2245795 /locus_tag="B565_2007" /db_xref="GeneID:10487924" CDS 2242712..2245795 /locus_tag="B565_2007" /codon_start=1 /transl_table=11 /product="ribonuclease E" /protein_id="YP_004392659.1" /db_xref="GI:330829707" /db_xref="GeneID:10487924" /translation="MLINATQEEELRVALVDGQQLYDLDIESPGHEQKKANIYKGKIT RVEPSLEAAFVDYGAERHGFLPLKEIARNYFPSGYSYQGRPNIKEVVREGQEVIVQID KEERGTKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERTELKEALSGLTVPEG MGLIVRTAGVGKSPEELEWDLNVLLNHWDSIHKASQERAAPVLIHQESNVIVRAIRDY LRRDVGEILIDNPVIFERAKAHIELVRPDFLNRVKLYKGEVALFNHFQIESQIESAFQ REVRLPSGGSIVIDPTEALTSIDINSSRATKGGDIEETALQTNLEAADEIARQLRLRD LGGLIVIDFIDMTPVRHQREVENRLREAVHQDRARIQLGRISRFGLLEMSRQRLRPSL NESSSHICPRCQGQGVIRDNESLALSILRLIEEEAMKDNTEQVHGQVPVDVAAYLLNE KRAAIASLEQRNDVRVYIIPNQHLETPHYEVTRIRQNEIPEAASYELKTEIAKPVYQP KQAQVIEREQPLLQGFAQPAQPAPVAPQQPAAPVAAAPAEAGFFSKLIKGITGLFSSD AAPADVKAPTEKPAAREARKDEGQRHQREEGRGRGQRPRRDDNRGNRNNAEAGEKREG GNREAGENRNRRPRKEREPRQEREARGEVRSEQRMEREPRQEREPREPRQERAPRPAR EPRAPREPRAEVVVEAVDAVDATVAQPRQEKEQKVAERRERRQLRKQIRVDVAAADTP ALPVDEVPAQAEVIDATVGNEQEEQSEGQRRSRRTPRSQRIEGQRRKRINEDARSQRD EEQQDTTTLTTAAQADIAKAQVEEPVVPVVTIPSAEAVAAALQASAALTEHVVVEAVA EEAAEQAAAQVEATQADVIASPVVESFAEVVVPAEPEVVVVAAPAVNMAATEVVETSP VVEEAPAVSNPVVEAAPAAVEMPVAVVEAPAPVAAVAVEETPVVTKQVAHGAGLLARA RKASAPMATPAEAPALPAREPVNYPPLVRNEVSTSGRHGGSTAAVNVATCPAGRP" misc_feature 2242712..>2244466 /locus_tag="B565_2007" /note="ribonuclease E; Reviewed; Region: rne; PRK10811" /db_xref="CDD:182751" misc_feature 2242796..2243074 /locus_tag="B565_2007" /note="S1_RNase_E: RNase E and RNase G, S1-like RNA-binding domain. RNase E is an essential endoribonuclease in the processing and degradation of RNA. In addition to its role in mRNA degradation, RNase E has also been implicated in the processing of rRNA, and...; Region: S1_RNase_E; cd04453" /db_xref="CDD:88419" misc_feature order(2242829..2242831,2242985..2242987,2242997..2242999) /locus_tag="B565_2007" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:88419" misc_feature order(2242901..2242903,2243018..2243020,2243027..2243029, 2243036..2243041,2243069..2243071) /locus_tag="B565_2007" /note="oligonucleotide binding site [chemical binding]; other site" /db_xref="CDD:88419" gene complement(2246542..2248266) /locus_tag="B565_2008" /db_xref="GeneID:10487925" CDS complement(2246542..2248266) /locus_tag="B565_2008" /codon_start=1 /transl_table=11 /product="phosphotransferase system, fructose-specific IIC component" /protein_id="YP_004392660.1" /db_xref="GI:330829708" /db_xref="GeneID:10487925" /translation="MKAILVTACPAGIATSFLAAKRIEQQAKQAGWELTLDVGSSVQP RQVPSKEQIAAADLVVVVASAPVDLAAYDGKRVYQGSMDLALQDPAALLEAATSGASL YRHQAAPAAAKSAAAGKRIVAVTACPTGVAHTFMSAEALETMAKQLGYQIRVETQGSV GAQNALTAEEIAAADLVFLATDIEVDMARFDGKPVYRTSTGAALKKTRTELDKAWNEA TLYRHSGASQPKKEEKAGPYKHLLTGVSFMLPMVVAGGLIIALSFVFGIEAFKVEGTL AAALMKIGGGSAFALMIPVLAGYIAYSIADRPGLAPGMIGGMLASSLGAGFLGGIVAG FLAGYSAKYLSDKVRLPTTLEALKPILIIPLFASLFTGLVMIYVVGGPVAGIMNAMTE FLNNMGSANAVLLGVIIGAMMCFDMGGPVNKAAYAFGVGLLASKTYAPMAAVMAAGMV PALGMGIATFLARTKFIKAEQEAGKASFVLGLCFISEGAIPFAAKDPMRVIPACMVGG ALTGALSMLFGCELMAPHGGLFVLFIPHAISNVMMYIVAIAAGSLLTGVSYAMLKRGE EQAKLATA" misc_feature complement(2246560..2248266) /locus_tag="B565_2008" /note="PTS system fructose-specific transporter subunits IIBC; Provisional; Region: PRK10712" /db_xref="CDD:182667" misc_feature complement(2247979..2248257) /locus_tag="B565_2008" /note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII (also referred to as FruAB) is a fructose-specific permease made up of two proteins (FruA...; Region: PTS_IIB_fructose; cd05569" /db_xref="CDD:99911" misc_feature complement(order(2248219..2248227,2248231..2248242)) /locus_tag="B565_2008" /note="P-loop; other site" /db_xref="CDD:99911" misc_feature complement(order(2248219..2248224,2248231..2248236, 2248240..2248242)) /locus_tag="B565_2008" /note="active site" /db_xref="CDD:99911" misc_feature complement(2248240..2248242) /locus_tag="B565_2008" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99911" misc_feature complement(2247619..2247906) /locus_tag="B565_2008" /note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII (also referred to as FruAB) is a fructose-specific permease made up of two proteins (FruA...; Region: PTS_IIB_fructose; cd05569" /db_xref="CDD:99911" misc_feature complement(order(2247865..2247873,2247877..2247888)) /locus_tag="B565_2008" /note="P-loop; other site" /db_xref="CDD:99911" misc_feature complement(order(2247865..2247870,2247877..2247882, 2247886..2247888)) /locus_tag="B565_2008" /note="active site" /db_xref="CDD:99911" misc_feature complement(2247886..2247888) /locus_tag="B565_2008" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99911" misc_feature complement(2246578..2247579) /locus_tag="B565_2008" /note="Phosphotransferase system, EIIC; Region: PTS_EIIC; cl00557" /db_xref="CDD:186079" gene complement(2248263..2249252) /locus_tag="B565_2009" /db_xref="GeneID:10487926" CDS complement(2248263..2249252) /locus_tag="B565_2009" /codon_start=1 /transl_table=11 /product="1-phosphofructokinase" /protein_id="YP_004392661.1" /db_xref="GI:330829709" /db_xref="GeneID:10487926" /translation="MKIVTITLNPALDLTTRLEAMSLGEVNLVSEANLRAAGKGINVA MVLKDLGREVGVTGWLGADNEQSFVSLFAERALDDHFVRVAGSTRINVKISEQSGRVT DLNLPGLTIEQGEVSALEQAIDQLAAHAEWFVLAGSLPKGVAPDYCAHLIRLLKAKGK QVIFDCSGAALSEGIKAAPTLVKPNLEELSQWAGRPIKTLSEQAECARALQASGIPNV VISNGADGLIWFAPDAVWQAIPPRMQVVSTVGAGDSLVAGLAHGLSLGWAPEQTLRLA TAVSALAVSQVAVGFDDINVLNPLLEQVRVERLDVLAPVQCNTPSMENSGDAQ" misc_feature complement(2248323..2249249) /locus_tag="B565_2009" /note="Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]; Region: FruK; COG1105" /db_xref="CDD:31302" misc_feature complement(2248431..2249249) /locus_tag="B565_2009" /note="1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose...; Region: FruK_PfkB_like; cd01164" /db_xref="CDD:29349" misc_feature complement(order(2248845..2248847,2249085..2249087, 2249091..2249093,2249109..2249111,2249121..2249123)) /locus_tag="B565_2009" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:29349" misc_feature complement(order(2248494..2248496,2248500..2248502, 2248572..2248574,2248590..2248592,2248698..2248700, 2248704..2248706,2248758..2248760)) /locus_tag="B565_2009" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:29349" gene complement(2249252..2250352) /locus_tag="B565_2010" /db_xref="GeneID:10487927" CDS complement(2249252..2250352) /locus_tag="B565_2010" /codon_start=1 /transl_table=11 /product="multiphosphoryl transfer protein" /protein_id="YP_004392662.1" /db_xref="GI:330829710" /db_xref="GeneID:10487927" /translation="MLKLAREQILLGQSVATKSDAIALLAGKLTEAGLVEAGYVDGML AREAQHATYLGSGIAIPHGTTDTRHLVKNTGVMVAQFPHGIEWDEGQIAYVAIGIAAK SDEHLGILRQLTHVLGDEQAAAQLKEATDADTIINILTGATAAKEVQYLTLADFPADD CDQLLLGAAARAKSAGWGDAAMVSALLASDPAYLGEGVWLARAQAAQTGWVLATPSSA LTAGELPVSAMLLLCAADSSHLPQLENLAKLAAAGQLATLAGNDALAMLQAGPASGLS ETFTIINPHGLHARPGAMLVKVAKEFASDIRVANLDGSGEAVSAKSLMKVIGLGVKCG HRLAFRAEGADAEAALKGIGEAIAAGLGEGAH" misc_feature complement(2249342..2250352) /locus_tag="B565_2010" /note="bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; Provisional; Region: PRK11109" /db_xref="CDD:182969" misc_feature complement(2249936..2250343) /locus_tag="B565_2010" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cd00211" /db_xref="CDD:29266" misc_feature complement(order(2250167..2250169,2250215..2250217)) /locus_tag="B565_2010" /note="active site" /db_xref="CDD:29266" misc_feature complement(2250167..2250169) /locus_tag="B565_2010" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29266" misc_feature complement(<2249342..2249521) /locus_tag="B565_2010" /note="Histidine-containing phosphocarrier protein (HPr)-like proteins. HPr is a central component of the bacterial phosphoenolpyruvate sugar phosphotransferase system (PTS). The PTS catalyses the phosphorylation of sugar substrates during their translocation...; Region: PTS-HPr_like; cd00367" /db_xref="CDD:29444" misc_feature complement(2249510..2249521) /locus_tag="B565_2010" /note="dimerization domain swap beta strand [polypeptide binding]; other site" /db_xref="CDD:29444" misc_feature complement(order(2249369..2249374,2249381..2249392, 2249453..2249455,2249462..2249464,2249474..2249479, 2249483..2249488,2249492..2249494)) /locus_tag="B565_2010" /note="regulatory protein interface [polypeptide binding]; other site" /db_xref="CDD:29444" misc_feature complement(2249489..2249491) /locus_tag="B565_2010" /note="active site" /db_xref="CDD:29444" misc_feature complement(2249387..2249389) /locus_tag="B565_2010" /note="regulatory phosphorylation site [posttranslational modification]; other site" /db_xref="CDD:29444" gene 2250395..2250574 /locus_tag="B565_2011" /db_xref="GeneID:10487928" CDS 2250395..2250574 /locus_tag="B565_2011" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392663.1" /db_xref="GI:330829711" /db_xref="GeneID:10487928" /translation="MNIRVTRQLTIDPNTVDCDRSLIFRPLGLFVADRLNRFTYTQTE SFQRIDQVPTKSAFQ" gene 2250649..2251635 /locus_tag="B565_2012" /db_xref="GeneID:10487929" CDS 2250649..2251635 /locus_tag="B565_2012" /codon_start=1 /transl_table=11 /product="fructose transport system repressor" /protein_id="YP_004392664.1" /db_xref="GI:330829712" /db_xref="GeneID:10487929" /translation="MMKLDEIAALAGVSRTTASYVINGKADQYRISQATRDKVMAVVT AHNYQPDSRAASLRGGQTKTLGFILPDLENASYAKLAKRLEQGARAQGYQLLIVCSED EPTTEKELAQMLVSRHVDALLVASCLPPDDPFYGKLQAQGSQILAIDRAMAADKFVTV ASENEKASFDLTSSLLTPTLRHIALITALPALTISKERKAGFEQAVASHSAARHLCEG DHFSRLEGYRLIKDLHQQLGQLPEALITTSYILMEGVLDYLLEQEIDMSQLAMATFGD DRLLDFLPFGINSLPQQHDALASQALELALKAVNGDYQSGLYYVSRTLKRRR" misc_feature 2250652..2251629 /locus_tag="B565_2012" /note="DNA-binding transcriptional regulator FruR; Provisional; Region: PRK11303" /db_xref="CDD:183083" misc_feature 2250664..2250825 /locus_tag="B565_2012" /note="Helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators; Region: HTH_LacI; cd01392" /db_xref="CDD:143331" misc_feature order(2250685..2250699,2250703..2250708,2250715..2250717, 2250739..2250744,2250751..2250753,2250790..2250792, 2250799..2250801,2250808..2250813,2250817..2250822) /locus_tag="B565_2012" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature 2250790..2250819 /locus_tag="B565_2012" /note="domain linker motif; other site" /db_xref="CDD:143331" misc_feature 2250838..2251623 /locus_tag="B565_2012" /note="Ligand binding domain of DNA transcription repressor specific for fructose (FruR) and its close homologs; Region: PBP1_FruR; cd06274" /db_xref="CDD:107269" misc_feature order(2250862..2250864,2250892..2250897,2250901..2250906, 2250913..2250915,2250928..2250930,2250937..2250939, 2250943..2250945,2250997..2250999,2251405..2251407, 2251492..2251494,2251498..2251500) /locus_tag="B565_2012" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:107269" misc_feature order(2250874..2250876,2250886..2250888,2251087..2251092, 2251123..2251134,2251240..2251242,2251390..2251392, 2251471..2251473) /locus_tag="B565_2012" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:107269" gene 2252188..2253381 /locus_tag="B565_2013" /db_xref="GeneID:10487930" CDS 2252188..2253381 /locus_tag="B565_2013" /codon_start=1 /transl_table=11 /product="Tyrosine-specific transport protein" /protein_id="YP_004392665.1" /db_xref="GI:330829713" /db_xref="GeneID:10487930" /translation="MNTKTLGCTLLIAGTTIGAGMLALPLASSSLGGPATLMLMVGLW ALMAFTAMLQVEASLNTGKWYLHQLADHLLGPWGKRIASFCILMLFYSLASAYISGGS SLLAQALADAGMTLSQEQAAWAFTLLFGGMVCVGTRSVDYLNRLMFTVKLVIMVVVLA LLLPRAEGQHLLSMPLGQGLLLAGLPVIFTSFGFHGSIPSVMLYLGDCPKQLRRVFVW GSALPLILYVLWQVAILGLLGQQALLQTGGALDSLLANVGKLVSWPAFNQAMHLFADL ALATSFLGVTLGLFDFMAKVTRRKDNWQGRTQTGLITFVPPLLFALYFPQGFIMALGY AAIALAILAVLLPVALVWQSRKQAPAHHYRAPGGMVALGVAAAMGVLIVGVQISVSLG MLPAL" misc_feature 2252188..2253375 /locus_tag="B565_2013" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene 2253635..2254192 /locus_tag="B565_2014" /db_xref="GeneID:10487931" CDS 2253635..2254192 /locus_tag="B565_2014" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392666.1" /db_xref="GI:330829714" /db_xref="GeneID:10487931" /translation="MMLHLKKSTLALVLLAASGALSAAEITNNNITDAEIKAAQDGWG AALIKISDDYRAGGIERAKATAEAVLDSAYGYQQGPVLFKPTLAGGEQTFRTNREGAL AYFVGNNSAYPADSGFALKNWQSYRYDNAAVYINGDMALTMGKVHLVDRDNKETTVDK TWGFKKGDDGKVRIVLHHSSLPYEG" misc_feature <2253710..2254186 /locus_tag="B565_2014" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG4337" /db_xref="CDD:34059" gene 2254412..2254798 /locus_tag="B565_2015" /db_xref="GeneID:10487932" CDS 2254412..2254798 /locus_tag="B565_2015" /codon_start=1 /transl_table=11 /product="relative of glutathione S-transferase" /protein_id="YP_004392667.1" /db_xref="GI:330829715" /db_xref="GeneID:10487932" /translation="MTILPVYAALLTLLFVLLSIRTIRTRHSRKVALGHGDDPAMLRA MRVHANFAEYVPIALLLIYFVETGSHTPWLIHLLGSALLLGRLCHAFGMSRTPENFRY RVAGMGLTFTVILVSAAHILITALLP" misc_feature 2254466..2254759 /locus_tag="B565_2015" /note="MAPEG family; Region: MAPEG; cl09190" /db_xref="CDD:195815" gene 2254915..2255565 /locus_tag="B565_2016" /db_xref="GeneID:10487933" CDS 2254915..2255565 /locus_tag="B565_2016" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392668.1" /db_xref="GI:330829716" /db_xref="GeneID:10487933" /translation="MKWIGWLLLVGLTPVAHATPLKLAAAVEHTAILRPFIHDWFGRA GIDFQLIPCTYARCEKLIEADHAVDGDMARIRGFDQTYPHLLQIGAPISEAAIYGQPR DNPSWPPAEGTVIGCLRGIQWCERFLGNYQVIWLNDEKQGLAQLHRGKVDWLIKMRPA SQPALASPWQKITKEQVFLYLDKKHRAEIAALLKIQLAFINNGRWLAMQKQYLSAI" gene complement(2255684..2257084) /locus_tag="B565_2017" /db_xref="GeneID:10487934" CDS complement(2255684..2257084) /locus_tag="B565_2017" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase RhlE" /protein_id="YP_004392669.1" /db_xref="GI:330829717" /db_xref="GeneID:10487934" /translation="MSFTSLGLAEPLLRAVAEQGYDTPSPIQQQAIPAVLAGRDLMAA AQTGTGKTAGFTLPMLQRLMESKRKVSPNRVRALVLTPTRELAAQVGESVRNYGKHLP MRSHVVFGGVSINPQMMATRRGLDVLVACPGRLIDLYNQNAVKFDEVEILVLDEADRM LDMGFIRDIRRILALMPKKRQNLLFSATFADEIRELATGLLDNPAVIEVAPRNSTAER IEQLVHPCDKANKIALLSHLVTSNNWQQVLVFTRTKHMANRVAETLDKNGVSAAAIHG NKSQGARTRALAGFKDGSVKVLVATDIAARGLDIDKLPQVVNFELPNVAEDYVHRIGR TGRAGAAGHAISLVAADEGKLIKAIERLTKQSIPCEQVAGFEASRETLDNIARGIGAP LRKEPRDPSEQRRAPRPQGQGQRQGAGRSASNGNAGGARTGNGGKPKPQGGQRPADGA GKPAQARRPRRSTHNQ" misc_feature complement(2256461..2257078) /locus_tag="B565_2017" /note="DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (...; Region: DEADc; cd00268" /db_xref="CDD:28928" misc_feature complement(2256422..2257039) /locus_tag="B565_2017" /note="DEAD-like helicases superfamily; Region: DEXDc; smart00487" /db_xref="CDD:128763" misc_feature complement(2256929..2256943) /locus_tag="B565_2017" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28928" misc_feature complement(2256611..2256622) /locus_tag="B565_2017" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:28928" misc_feature complement(2256521..2256529) /locus_tag="B565_2017" /note="motif III; other site" /db_xref="CDD:28928" misc_feature complement(2256098..2256430) /locus_tag="B565_2017" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature complement(order(2256176..2256184,2256257..2256262, 2256320..2256331)) /locus_tag="B565_2017" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" gene 2257433..2258263 /locus_tag="B565_2018" /db_xref="GeneID:10487935" CDS 2257433..2258263 /locus_tag="B565_2018" /codon_start=1 /transl_table=11 /product="family 3 extracellular solute-binding protein" /protein_id="YP_004392670.1" /db_xref="GI:330829718" /db_xref="GeneID:10487935" /translation="MTTSYRPRGSWQARIGLLLLLLSPALQASQTLTVAWSHWPPFSQ INNRGELDGLDVSLTRQILTQAGFAPKFRELPWARALHLVEHDQLDVAMAALPLPERQ SYARFSTPYRQSAYVLLSNDPIPGHQDRWAQLDNLPALCNEKGLKIGKLRGTRPMHQM DSCPALKMATEYNADERMIDLLLARRLDGIIMEWQYARYRLAQLGAEEFISCQLLLHH QPVSLMFAKNSVSEEQILKVNEAIHALPKPHNKFSPPRCRLNADPGAADLLTRTLRKH " misc_feature 2257541..2258173 /locus_tag="B565_2018" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature 2257550..2258176 /locus_tag="B565_2018" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature order(2257661..2257663,2257733..2257735,2257895..2257897, 2258009..2258011) /locus_tag="B565_2018" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(2257970..2257972,2257988..2257990) /locus_tag="B565_2018" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 2258087..2258104 /locus_tag="B565_2018" /note="hinge residues; other site" /db_xref="CDD:29040" gene complement(2258375..2259463) /locus_tag="B565_2019" /db_xref="GeneID:10487936" CDS complement(2258375..2259463) /locus_tag="B565_2019" /codon_start=1 /transl_table=11 /product="Chorismate synthase" /protein_id="YP_004392671.1" /db_xref="GI:330829719" /db_xref="GeneID:10487936" /translation="MAGNSFGQLFRVTTFGESHGLALGAVVDGCPPGLEISEADLQGD LDRRKPGTSRYTTPRREPDEVKILSGVFEGKTTGTSIGLLIENTDQRSKDYSDIKDLF RPGHADYTYHQKYGQRDYRGGGRSSARETAMRVAAGAIAKKYLKQVHGIEITGFLSQL GPIKAEGFDAAQIEQNPFFFPDAGKLEELDQYMRDLKKEGNSIGAKVQVIARNVPVGL GEPVFDRLDADIAHAMMGINAVKGVEIGDGFAVVEQKGSEHRDEMTPSGFASNHAGGI LGGISSGQDIVVSMALKPTSSITVPGKTINTEGEAIEMITKGRHDPCVGIRAVPIAEA MLALVLMDHLLRHRAQNQGVLTHTPLLR" misc_feature complement(2258435..2259436) /locus_tag="B565_2019" /note="Chorismase synthase, the enzyme catalyzing the final step of the shikimate pathway; Region: Chorismate_synthase; cd07304" /db_xref="CDD:143612" misc_feature complement(order(2258459..2258461,2258573..2258575, 2258582..2258593,2258597..2258599,2258618..2258626, 2258630..2258638,2258645..2258647,2258693..2258698, 2258708..2258713,2258717..2258722,2258729..2258743, 2258750..2258752,2258756..2258761,2258765..2258773, 2258780..2258785,2258789..2258791,2258801..2258809, 2258813..2258815,2258846..2258863,2258876..2258878, 2259062..2259064,2259086..2259091,2259119..2259133, 2259212..2259214,2259218..2259220,2259224..2259226, 2259230..2259235,2259254..2259259,2259263..2259268, 2259365..2259370,2259380..2259382,2259386..2259388, 2259392..2259394,2259413..2259433)) /locus_tag="B565_2019" /note="Tetramer interface [polypeptide binding]; other site" /db_xref="CDD:143612" misc_feature complement(order(2258480..2258482,2258492..2258494, 2258573..2258581,2258585..2258590,2258747..2258752, 2259068..2259070,2259077..2259088,2259146..2259151, 2259320..2259322,2259407..2259409)) /locus_tag="B565_2019" /note="Active site [active]" /db_xref="CDD:143612" misc_feature complement(order(2258483..2258485,2258492..2258494, 2258501..2258503,2258573..2258581,2258585..2258587, 2258747..2258755,2259083..2259085,2259089..2259091, 2259143..2259151)) /locus_tag="B565_2019" /note="FMN-binding site [chemical binding]; other site" /db_xref="CDD:143612" gene complement(2259476..2260423) /locus_tag="B565_2020" /db_xref="GeneID:10487937" CDS complement(2259476..2260423) /locus_tag="B565_2020" /codon_start=1 /transl_table=11 /product="adenine-specific methylase YfcB" /protein_id="YP_004392672.1" /db_xref="GI:330829720" /db_xref="GeneID:10487937" /translation="MEVDLDKIFIDEVVAEMHTIQDMLRWAMSRFNDAGIFYGHGTDN AWDEAVQLVLPALHLPPDVDPAMRHSRLTSSERHRIAELIIRRVQERVPAAYLTNKAW YAGWEFYVDERVLIPRSPIAEMVANRFAPFLKHEPTRIMDLCTGSGCIAIIMAHEFPE AEVDAIDISVDALNVAERNINDHGLEQQVIPIRSDLFRDLPAGDKYDLIVSNPPYVDS EDMSDLPDEFRHEPELALASGSDGLKLTKRLLAHAADFLKDNGVLVVEVGNSMIHLEA QFPEIPFTWVEFENGGHGVFVMTRDELMQYQDHFAIYKN" misc_feature complement(2259548..2260369) /locus_tag="B565_2020" /note="HemK family putative methylases; Region: hemK_fam; TIGR00536" /db_xref="CDD:129627" misc_feature complement(2259623..2260009) /locus_tag="B565_2020" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(2259788..2259790,2259836..2259844, 2259920..2259925,2259977..2259997)) /locus_tag="B565_2020" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 2260494..2261018 /locus_tag="B565_2021" /db_xref="GeneID:10487938" CDS 2260494..2261018 /locus_tag="B565_2021" /codon_start=1 /transl_table=11 /product="Smr/MutS family protein" /protein_id="YP_004392673.1" /db_xref="GI:330829721" /db_xref="GeneID:10487938" /translation="MKKTPSPTDEETLLFRDAIKGTRKIKQDTIRAELRPVKQKRELR ETREKLGVDHYFSDEYQPHLDDDGPTRYVREDVSKFELKKLKRGIYPPEIYLDLHGMN QQQAKQELAALLTLCQKENIHVASVMHGIGKHILKQRIPSWLAQHPNVRAFHQAPREW GGDSAILVLLDIEE" misc_feature 2260494..2261015 /locus_tag="B565_2021" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG2840" /db_xref="CDD:32668" misc_feature 2260494..2261015 /locus_tag="B565_2021" /note="Smr domain; Region: Smr; cl02619" /db_xref="CDD:194381" gene 2261076..2262371 /locus_tag="B565_2022" /db_xref="GeneID:10487939" CDS 2261076..2262371 /locus_tag="B565_2022" /codon_start=1 /transl_table=11 /product="sensory box/GGDEF domain-containing protein" /protein_id="YP_004392674.1" /db_xref="GI:330829722" /db_xref="GeneID:10487939" /translation="MFTQGSHADIKSSLDAIGAAVAVFSLDKDDHFVLVSANDTFAKA FELDVLGSIGKQLSEMFPRYITNTIEPPMHECVRMQTGLESELPIDSLSRTSWWRFIL SPIIPEQARINRIIVTAIDITARMQLEEALTTSRRRFEAVVNSAYDGIISVSSESRIE LINTAACEMFGIDESYLGKRLETLLPQRFRANHETYFKAFSSSPINSRPMHARASVMG LRRDGSEFPLEVTIAKINLGPTTEMTAILRDISERARLVEELKVAATTDPLTGIANRR RFNELVNAEMQRCQRFGHTMSLLLIDIDHFKEVNDTFGHQQGDLAILSLVKRISKQLR EVDMLGRWGGEEFIVLLPETSLELAWASAERIRLAIESQHHALEGALEISLTISIGIS ASKGSHDTVEKMVRRADTALYLAKKQGRNCCRKEEPEPT" misc_feature 2261115..2261450 /locus_tag="B565_2022" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:117025" misc_feature 2261478..2261855 /locus_tag="B565_2022" /note="PAS domain S-box; Region: sensory_box; TIGR00229" /db_xref="CDD:161776" misc_feature 2261484..2261669 /locus_tag="B565_2022" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature 2261868..2262347 /locus_tag="B565_2022" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(2261979..2261981,2262108..2262110) /locus_tag="B565_2022" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(2261994..2261996,2262003..2262008,2262018..2262020, 2262030..2262032,2262096..2262098,2262102..2262113) /locus_tag="B565_2022" /note="active site" /db_xref="CDD:143635" misc_feature order(2262084..2262086,2262168..2262170) /locus_tag="B565_2022" /note="I-site; other site" /db_xref="CDD:143635" gene complement(2262502..2263110) /locus_tag="B565_2023" /db_xref="GeneID:10487940" CDS complement(2262502..2263110) /locus_tag="B565_2023" /codon_start=1 /transl_table=11 /product="phosphoglycerate mutase" /protein_id="YP_004392675.1" /db_xref="GI:330829723" /db_xref="GeneID:10487940" /translation="MELVVIRHGETQANAEERYQGALDIGLNDDGVRQISRLAEKVAV TEPPFDRLLASPLLRTRESAAILSRQLGLHVELVSAFRERDVGLFEGLTQAEARDRYP ELWARNITRRWAEAPPGGETLDEVIARVLQGLTELASTMQGERILLVAHGMVAKVIRA VTIAGFDDFFEWQLPNGGMLSVRLSLDDGGPLRFSRPLDGCD" misc_feature complement(2262517..2263107) /locus_tag="B565_2023" /note="Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction; Region: HP_PGM_like; cd07067" /db_xref="CDD:132718" misc_feature complement(order(2262655..2262660,2262934..2262936, 2263087..2263092)) /locus_tag="B565_2023" /note="catalytic core [active]" /db_xref="CDD:132718" gene complement(2263709..2265172) /locus_tag="B565_2024" /db_xref="GeneID:10487941" CDS complement(2263709..2265172) /locus_tag="B565_2024" /codon_start=1 /transl_table=11 /product="chitinase" /protein_id="YP_004392676.1" /db_xref="GI:330829724" /db_xref="GeneID:10487941" /translation="MFKPKRCAWLIAAACALPSYAAMSAAMNIQPDPQNAGGYVISAP DLAVMEKAKTANPMYAIWAKALATRSNKIVDAIEPGLASNPDNVKRVERVFPQSEWEY LTQMAAPEYTYVRFLRAIGKFPAFCGEYTDGRDSDAICKKSIVTAFAHFSQETGGHIA KENVSDNPLGLEEWQQALVHVREMGWSEGQTGYTTGCGQNDWQNKKWPCSTGQGYFGR GAKQLSYHFNYGAFSEAMFDGDASVLLNNPGLVADSWLNLASAIWFFLTPQAPKPAML HVIDRTWVPSKREADAGIGYGFGTTINVINGGIECGEQNKDKGQPVNRIRYWEGLANH YQIPLKADEKNTCWQQTPYGSLNLNGATDVLYTNWDGNWKYYPDRPGGYSFECELVGF QTAYSALVPGDYEKCVTNFYGSHANWPKVRVVDKLTPPPVDPSEPPIGGNPAWEATKV YTAGSKVSYKGAVYQAKWWTQGDDPAKGGPWASVTTQ" misc_feature complement(2264483..2265091) /locus_tag="B565_2024" /note="Uncharacterized protein contain chitin-binding domain type 3 [General function prediction only]; Region: COG3979" /db_xref="CDD:33759" misc_feature complement(2264132..2264914) /locus_tag="B565_2024" /note="Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but...; Region: chitinase_glyco_hydro_19; cd00325" /db_xref="CDD:29557" misc_feature complement(order(2264219..2264221,2264255..2264257, 2264489..2264494,2264507..2264509,2264624..2264626, 2264711..2264713)) /locus_tag="B565_2024" /note="putative sugar binding site [chemical binding]; other site" /db_xref="CDD:29557" misc_feature complement(order(2264501..2264503,2264624..2264626, 2264711..2264713)) /locus_tag="B565_2024" /note="catalytic residues [active]" /db_xref="CDD:29557" misc_feature complement(2263730..2263843) /locus_tag="B565_2024" /note="Chitin/cellulose binding domain. Putative carbohydrate binding domain found in many different glycosyl hydrolase enzymes. May occur in tandem arrangements; Region: ChtBD3; cd00036" /db_xref="CDD:28918" misc_feature complement(2263766..2263771) /locus_tag="B565_2024" /note="chitin/cellulose binding site [chemical binding]; other site" /db_xref="CDD:28918" gene complement(2265480..2266700) /locus_tag="B565_2025" /db_xref="GeneID:10487942" CDS complement(2265480..2266700) /locus_tag="B565_2025" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392677.1" /db_xref="GI:330829725" /db_xref="GeneID:10487942" /translation="MSLLFDCKAGAFVLAQRFQHLDRLLTRYRRWWQYQPYHHLTMAF TDEAPELAAKLNGLTQTQLAELDADMDALSSLLAPWIAEGAELQQLSQLAPFTPEPIT CSKEMALHMPGRKQAQIESFTACLPAHQGPYLEWCAGKGHLGRLVSLHRQAPILSLEL QGQLCDEGRLLAERDGANMTFTCADAFAPESAVLIAPEHHAMALHACGELHTHLLERV AERGARGVTISPCCYHLIRSSHYRPLSAAANASELVLSKADLKLPLQETVTGGARIAR LREQEVVWRLGFDCLQRQVRGVDEYLPVPNMQKSLLTGTFESFCVWAAERKGIVLPAG LDYLAWLEHGERRFGDVARMELVRHLFRRPLEIWLALDRALFLQEQGYRVEVGEFCAK PMTPRNILIRAVRA" gene 2266885..2267463 /locus_tag="B565_2026" /db_xref="GeneID:10487943" CDS 2266885..2267463 /locus_tag="B565_2026" /codon_start=1 /transl_table=11 /product="PhnA protein" /protein_id="YP_004392678.1" /db_xref="GI:330829726" /db_xref="GeneID:10487943" /translation="MTINAILQARAGAKCELCSAEQALTAFVVPHSPASDDDHSVAIC DTCRGQLEQPDTLVVNHWRCLSDSMWSQVPAVQVMAWRQLKALSGKGEVWAQDLLDMM YMEDEAKAWAEAGIADEDEDSVPTVDSNGAVLQEGDSVTLIKDLDVKGAGFTAKRGTL VKGIHLTNNPLHIEGKVNGVQIVLVAAYLKKA" misc_feature 2266903..2267040 /locus_tag="B565_2026" /note="PhnA Zinc-Ribbon; Region: PhnA_Zn_Ribbon; smart00782" /db_xref="CDD:129018" misc_feature 2267260..2267421 /locus_tag="B565_2026" /note="PhnA protein; Region: PhnA; pfam03831" /db_xref="CDD:190767" gene complement(2267673..2269199) /locus_tag="B565_2027" /db_xref="GeneID:10487944" CDS complement(2267673..2269199) /locus_tag="B565_2027" /codon_start=1 /transl_table=11 /product="fumarate hydratase, class I" /protein_id="YP_004392679.1" /db_xref="GI:330829727" /db_xref="GeneID:10487944" /translation="MSIIKKQDFIDSIADALQYISYYHPLDFVQAAKAAYDREANPAA KDALAQILINSRMSAEGHRPLCQDTGIVTCFVKIGMQVQWDSDMTVQEMVDEGTRRAY TNPDNPLRASVLADPAGSRKNTKDNAPAVVHIDMIPGNKVEVSIAAKGGGSENKSKMV MLNPSDDIVEWVLKTVPTMGAGWCPPGMLGIGIGGTAEKAAVLAKEALMEHIDIQELI ARGPQTTEEKLRVELYDKVNKLGIGAQGLGGLTTVLDVKVKSAPTHAASKPVVMIPNC AATRHVHFELDGSGPAELTPPKLSDWPEITREAGGNVRRVNVDGITKAELASWKSGDT VLLSGKILTGRDAAHKRIADMLKNGEGLPEGVDFTNRFIYYVGPVDAVRDEVVGPAGP TTSTRMDKFTDMMLGETGLIGMIGKSERGPKTVESIKQHKAVYLMAVGGAAYLVAKAI KKARVVAFADLGMEAIYEFEVEDMPVTVAVDSEGNNIHETGPAYWSAKIAELDGKLSS " misc_feature complement(2268342..2269175) /locus_tag="B565_2027" /note="Fumarate hydratase (Fumerase); Region: Fumerase; cl00851" /db_xref="CDD:186222" misc_feature complement(2267721..2268338) /locus_tag="B565_2027" /note="Fumarase C-terminus; Region: Fumerase_C; cl00795" /db_xref="CDD:186192" gene 2269407..2270777 /locus_tag="B565_2028" /db_xref="GeneID:10487945" CDS 2269407..2270777 /locus_tag="B565_2028" /codon_start=1 /transl_table=11 /product="para-aminobenzoate synthase, component I" /protein_id="YP_004392680.1" /db_xref="GI:330829728" /db_xref="GeneID:10487945" /translation="MTPTLHIHHLDHSAELHQLFARLQHQPWAMLLESAGPLGADNGF DIITADPLATLETRGEVTTLRIGAKISKHHEDPLALLAHTQRQLLGELDLCATHLPFI GGALGLFGYDLGRRFERLPVQAAADIAVPDMAVGIYDWALLRNVATGDWQLVHWGDKA GLANRLAWLEQQQAKPAPAFALQGAWQSNMSRAEYGEKFARIQEYLAAGDCYQINLTQ RFSAPYQGDEWQAYCLLATANKAPFSAFIRLPDSALLSLSPERFLLLDGRHIETKPIK GTRPRHPDPATDQQVALELAQADKDRSENLMIVDLLRNDIGRVSRPGSVSVPHLFAVE SFPAVHHLVSTIHGELDARWQGVDLLRACFPGGSITGAPKIRAMEIIEELEPQRRNAY CGSIGYLSQHGRMDTSICIRTLIAEAGRLHCWAGGGIIADSDADSEYQETYDKVARIL PPLSAL" misc_feature 2269443..2269832 /locus_tag="B565_2028" /note="Anthranilate synthase component I, N terminal region; Region: Anth_synt_I_N; pfam04715" /db_xref="CDD:191067" misc_feature 2269464..2270765 /locus_tag="B565_2028" /note="aminodeoxychorismate synthase subunit I; Provisional; Region: pabB; PRK15465" /db_xref="CDD:185362" misc_feature 2269719..2270753 /locus_tag="B565_2028" /note="chorismate binding enzyme; Region: Chorismate_bind; cl10555" /db_xref="CDD:195988" gene 2270820..2271386 /locus_tag="B565_2029" /db_xref="GeneID:10487946" CDS 2270820..2271386 /locus_tag="B565_2029" /codon_start=1 /transl_table=11 /product="MutT/nudix family protein" /protein_id="YP_004392681.1" /db_xref="GI:330829729" /db_xref="GeneID:10487946" /translation="MDRHELLTRFQLQRPAPAHRLAIGGLSPAAVLIPVVMRDEGLSV LLTRRSPRLRHHGGQISFPGGRQDPGDENLIATALRETEEELGIPARLIEVIGTLNPL NTVSRFEVLPVLGLLDGNYPLILSPDEVDHAFEVPLTHLLDRRNHIPLTLSRGGKAHT IYWIPWQQHFIWGATASMINQLAQHLAK" misc_feature 2270901..2271365 /locus_tag="B565_2029" /note="Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative...; Region: CoAse; cd03426" /db_xref="CDD:72884" misc_feature order(2270964..2270966,2270994..2270996,2271015..2271017, 2271057..2271062,2271141..2271143) /locus_tag="B565_2029" /note="putative active site [active]" /db_xref="CDD:72884" misc_feature order(2270964..2270966,2270994..2270996,2271015..2271017, 2271057..2271059,2271141..2271143) /locus_tag="B565_2029" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:72884" misc_feature 2271012..2271083 /locus_tag="B565_2029" /note="nudix motif; other site" /db_xref="CDD:72884" misc_feature 2271060..2271062 /locus_tag="B565_2029" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:72884" gene 2271603..2272901 /locus_tag="B565_2030" /db_xref="GeneID:10487947" CDS 2271603..2272901 /locus_tag="B565_2030" /codon_start=1 /transl_table=11 /product="serine transporter family protein" /protein_id="YP_004392682.1" /db_xref="GI:330829730" /db_xref="GeneID:10487947" /translation="MSNTVTGTQGVAASTEQGIRSTQTTRWEKRDSTWVISLFGTAVG AGILFLPINAGMGGFWPLVVMALLVGPMTYLAHRGLARFVLSSKKPNADITEVVEEHF GVGAGKLITLLYFFAIYPIVLIYGVGITNTVESFMVNQLQMSAPPRWILSIVLIMGMM SVMLAGEKLMLKVTELLVYPLIAILAGISLYLIPDWTGAALEQVPSAKDFATTLWLTI PVLVFSFNHSPAISSFSLAQRRDHGDQAVEKADAILKRTAMVLLGFVMFFVFSCVMSL TPAQLAEAKAQNIAVLSYLANQHASPIISYFGPLVAFVAIVSSFFGHYLGAREGLKGM IVQNMRKSGKEPNAKKVEMFIIAFFILTLWGTAIANPSILGMIESLGGPIIATILFIM PMYAIKRVPAMAKYQGHISNVFVAVMGMIAISAILYQLVG" misc_feature 2271666..2272898 /locus_tag="B565_2030" /note="Amino acid permeases [Amino acid transport and metabolism]; Region: SdaC; COG0814" /db_xref="CDD:31156" misc_feature 2271681..2272865 /locus_tag="B565_2030" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene complement(2273168..2274154) /locus_tag="B565_2031" /db_xref="GeneID:10487948" CDS complement(2273168..2274154) /locus_tag="B565_2031" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392683.1" /db_xref="GI:330829731" /db_xref="GeneID:10487948" /translation="MKKTTLSWAIIGALGLVGCGGGGGDSGGGGTTPPEPQPRALPVA GVYLPVLMDAQGQLINRPVNDSYRAVGLVYPASTEGTGWAMNIAEKRSATVSTYTFPQ GFSSLNKGEGYPLTLSLLVNKSQPSTFDSAEQKSNTNVDGLVKVASVPDTAGSSQSLW VLDYRPVKAKIDSALTIQNWGGQVALQPMVTAPINADSWYNLGESALFQDFKTERSNN GLGIKLTILFKEGCSVSGETEANTQGLNKLTLTGWKECSFNTLTGPADIKEGKIYEGL WEKRMREFADRNASVTAYLTMKPGSNGQKDTLVLGIPEITGITPFLLEAQPL" gene complement(2274362..2275612) /locus_tag="B565_2032" /db_xref="GeneID:10487949" CDS complement(2274362..2275612) /locus_tag="B565_2032" /codon_start=1 /transl_table=11 /product="serine/threonine transporter sstT" /protein_id="YP_004392684.1" /db_xref="GI:330829732" /db_xref="GeneID:10487949" /translation="MTQQHPLLRLVNSTSLVSQILVGLVFGILLALFAPEWAKTAGLL GSLFVGALKAVAPLLVFVLVMAAIIGHKQGQKTNIRPLLALYLFGTFSAAVVAVIASF LFPSNLHLVANTAEITPPGGITEVLQTLLFNVVTNPVKALMDANYIGILAWAIGLGIA MRHANESTKALITDLSHGVSAIVKAVIRCAPLGILGLVASTLAETGFDALFGYAQLLV VLIGCMLFIAFVVNPLIVFWKIKRNPYPLVLTCLKESGVTAFFTRSSAANIPVNMALC EKLRLPKDTYAVSIPLGATINMAGAAITITVLAMAAVHTLGMEVDMATAILLSVVATI SACGASGVAGGSLLLIPLACSLFGISNDIAMQVVAVGFIIGVLQDSAETALNSSTDVL FTAAACMAEDETLLEPSALPSSEA" misc_feature complement(2274407..2275612) /locus_tag="B565_2032" /note="Sodium:dicarboxylate symporter family; Region: SDF; cl00573" /db_xref="CDD:193876" gene 2275968..2277881 /locus_tag="B565_2033" /db_xref="GeneID:10487950" CDS 2275968..2277881 /locus_tag="B565_2033" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase RecQ" /protein_id="YP_004392685.1" /db_xref="GI:330829733" /db_xref="GeneID:10487950" /translation="MIPSLLNQYFGFSALRPGQEAVISRVLAGQSAAAIFPTGSGKSL CYQLPALALHHLTLVISPLLALMHDQLAFLKSKGISAATLDSSQSPEESRRVMQQALD GQLKILMISVERLKNERFRRFIQQVPLSLLVVDEAHCISEWGHNFRPDYLKLPSYRHD LKIPQVLLLTATATPAVIQDMQTKFGIAPEGVVVTGFYRPNLDLAVIPLSPDARDSWL AQELANDPAAATIVYVTLQHTAEACAEQLIREGINARAYHAGLDSALRSQIQHDFMAG KVDCIVATIAFGMGIDKADIRRVIHYDLPKSIENYSQEIGRAGRDGQPSRCIVLANQS QLPVLENFVYGDTPDLSAILQLLAIIKQSGNEWEFTLLRLSNDTNIRQLPLKTLLVYL EMAGIITPAYSYYADYRFKFVLDKGEIVSRFNPDRRQFLEQLFVCAPQARSWCTMDFD ALWQGYQGERQRAVAALDYLQQQGWIELESKQMTEVYRITRQGWDCEQEANALHALFL QKEQSELARLQAMLDFFTSSECLSYRLARYFADEVAPVHCGHCSVCRGEVAHLPPLPQ LAMPNETGIRAWCDPLIAKTGSVDDRVLARFLCGITTPLTSRVKAKSLAGAGQLAAHP FARVLAAVQQAYP" misc_feature 2275992..2276576 /locus_tag="B565_2033" /note="DEAD-like helicases superfamily; Region: DEXDc; smart00487" /db_xref="CDD:128763" misc_feature 2276076..2276483 /locus_tag="B565_2033" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 2276082..2276096 /locus_tag="B565_2033" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 2276370..2276381 /locus_tag="B565_2033" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature <2276655..2276957 /locus_tag="B565_2033" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(2276670..2276681,2276739..2276744,2276817..2276825) /locus_tag="B565_2033" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature <2276703..>2277335 /locus_tag="B565_2033" /note="Superfamily II RNA helicase [DNA replication, recombination, and repair]; Region: COG4581" /db_xref="CDD:34219" misc_feature order(2276841..2276843,2276904..2276906,2276916..2276918, 2276925..2276927) /locus_tag="B565_2033" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature <2277492..>2277629 /locus_tag="B565_2033" /note="ATP-dependent DNA helicase RecQ; Region: recQ; TIGR01389" /db_xref="CDD:130456" gene 2278476..2280398 /locus_tag="B565_2034" /db_xref="GeneID:10487951" CDS 2278476..2280398 /locus_tag="B565_2034" /codon_start=1 /transl_table=11 /product="serine protein kinase, PrkA" /protein_id="YP_004392686.1" /db_xref="GI:330829734" /db_xref="GeneID:10487951" /translation="MGIFEHYQQRYEKAREEEYTIQEFLDMCKQDKACYASAAERLLT AIGEPEMVDTSANPRLSRLFSNRVVARYPAFKDFYGMEEAIEQIVSYLKHSAQGLEEK KQILYLLGPVGGGKSSLAEKLKSLMQKVPIYRIKGSPVNDHPFCLFDIEEDGEILEKE YGIPRRYLRPIMSPWVAKRLHEFGGDITKFKVEKVNPSILDQIAIAKTEPGDDNNQDI SSLVGKVDIRMLEHFAQDDADAYSYSGALCKANQGVMEFVEMFKAPIKVLHPLLTATQ EGNYNGTEGLSALPFDGILLAHSNESEWQQFRNNKNNEAFLDRVYIVKVPYCLRVSEE VKIYEKLLINSELTEAKCAPGTLELLGQFSVLSRLKEPENSSIYSKMRVYDGESLKDT DPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHAEVAANPVHLFYVLEQQI EREQFPQELHDRYLEFIKGYLTPRYVEFIGKEIQTAYLESYSEYGQNIFDRYVTYADF WIQDQEYRDPETGQLFDRASLNSELEKIEKPAGISNPKDFRNEIVNFVLRARANNAGR NPNWTSYEKLRTVIEKKMFSNTEELLPVISFNSKTSAEEQKKHDNFVERMMEKGYTRK QVRLLSEWYLRVRKSS" misc_feature 2278476..2280395 /locus_tag="B565_2034" /note="PrkA family serine protein kinase; Provisional; Region: PRK15455" /db_xref="CDD:185352" misc_feature 2278533..2279603 /locus_tag="B565_2034" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 2279607..2280371 /locus_tag="B565_2034" /note="PrkA serine protein kinase C-terminal domain; Region: PrkA; pfam06798" /db_xref="CDD:148418" gene 2280368..2281693 /locus_tag="B565_2035" /db_xref="GeneID:10487952" CDS 2280368..2281693 /locus_tag="B565_2035" /codon_start=1 /transl_table=11 /product="3-dehydroquinate dehydratase" /protein_id="YP_004392687.1" /db_xref="GI:330829735" /db_xref="GeneID:10487952" /translation="MVSQGTQVILTLTVQGGVMAHFIDRRLNGKNKSAVNRQRFIRRY KKQIKQAVSDAVSKRSIQDVDKGESISIPTKDIGEPHFHQGHGGKREMVHPGNDQFVS GDKIDRPKGGGGGQGSGEGQASNQGEGADDFVFQISKDEYLDLLFEDLELPRLQKTQL NQLMEVKTYRAGYTSNGVPANINVVRSLQNSLARRMALQAGKKRQLHELEDRLALLAN DPNEHFAEIALLEKEIRELKRRIDAVPFIDTFDLKFNNFVKRPVPSSQAVMFCLMDVS GSMDQATKEMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTI VSSALKMMNDIINERYPANQWNIYAAQASDGDNWADDSPQCREILARDIMPRVRYYSY IEITTRAHQTLWHEYESVASQFPHFAMEHIRKVEDIYPVFRELFKKQAA" misc_feature 2280422..2281684 /locus_tag="B565_2035" /note="Protein of unknown function (DUF444); Region: DUF444; pfam04285" /db_xref="CDD:113071" misc_feature 2280461..2281690 /locus_tag="B565_2035" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cl00057" /db_xref="CDD:197401" gene 2281703..2283223 /locus_tag="B565_2036" /db_xref="GeneID:10487953" CDS 2281703..2283223 /locus_tag="B565_2036" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase, biotin carboxyl carrier protein" /protein_id="YP_004392688.1" /db_xref="GI:330829736" /db_xref="GeneID:10487953" /translation="MIETEKRVAPLDDGPDWNFDLLETYHQEIARVARFYKLDTYPNQ IEVITAEQMMDAYSSVGMPIGYQHWSFGKRFIHTERNYKRGQMGLAYEIVINSDPCIA YLMEENTMPMQALVMAHACYGHNSFFKNNYLFKAWTDASSIIDYLLFAKNYITQCEEK HGIEAVEQLLDSCHALMNFGVDRYKRPQKISMAEEKRRQKAREDYLQTQVNELWRTLP KQHKAAGVEDRRYPAEPQENILYFIEKNAPLLEPWQREVVRIVRKISQYFYPQKQTQV MNEGWATFWHYTILNHLYDEGKLSDRFMMEVLHSHTNVVYQPAYNSRYYSGINPYALG FAMFTDLRRICENPTEEDKYWFPDYAGSNWVDTLHFAMQNFKDESFISQFLSPKVMRD MKLFAIDDDDLKNYLKVSAIHNDEGYRQVRNTLSAQYNLSNLEPNIQVYNVAVKGDRS LTLRYVPHNRIPLGDSRHEVLKHLHQLWGFDVVLEQDNGELPPDIIGRCPERKPGI" misc_feature 2281718..2283208 /locus_tag="B565_2036" /note="SpoVR family protein; Provisional; Region: PRK11767" /db_xref="CDD:183304" misc_feature 2281736..2283208 /locus_tag="B565_2036" /note="Uncharacterized conserved protein [Function unknown]; Region: SpoVR; COG2719" /db_xref="CDD:32612" gene complement(2283392..2285542) /locus_tag="B565_2037" /db_xref="GeneID:10487954" CDS complement(2283392..2285542) /locus_tag="B565_2037" /codon_start=1 /transl_table=11 /product="Fatty oxidation complex subunit alpha" /protein_id="YP_004392689.1" /db_xref="GI:330829737" /db_xref="GeneID:10487954" /translation="MMSAKTFSLDVRKDGIGILTMDVPGESMNTLKAAFVEEIRTVLA EVKRNKDLIGLVITSGKKDSFIAGADITMLAACTSAKDAETLSREGQEIFAEIEGLTI PVIAAIHGPCLGGGLELALACHGRVVTDHGKSVLGLPEVQLGLLPGSGGTQRLPRLIG VAKALDLMLTGKQVRAKQAKKLGLVDDVVPPSILLDAAIKLAKKGKPRHQLKRDLQGK VLETNKLGRKVLFDQASKGVKAKTRGNYPAPERILDVVRIGVEEGMKAGLVAESRHFG ELVMTAESAALRSIFFATTEMKKEVTYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKA GVPVRIKDVASAGIGNAMRYSYDILAKKLKRRHILRSELEKQMSLLTGTLDYSGFHRV DMVVEAVFEDLALKHQMVKDVEHECGEHTVFASNTSSLPINQIAAEAAHPERVVGLHY FSPVDKMPLAEIIPHAGTSAETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNE AARLVLEGEPVEVLDSALLDFGFPVGPITLLDEVGIDVGAKISPILEKELGGEQFQAP KAFDKLLQNDRKGRKNGKGFYLYGKAAPRNKLTGKEGKKTVDESVYGVLGIKPSAKLA RQEIAERCVLLMLNEAAMALDSGVVASARDGDIGAIFGIGFPPFLGGPFRYMDTLGID HLVGRLEYYQKRHGDRFAPCARLKAMAAEQQTFY" misc_feature complement(2283395..2285542) /locus_tag="B565_2037" /note="multifunctional fatty acid oxidation complex subunit alpha; Reviewed; Region: fadJ; PRK11154" /db_xref="CDD:183002" misc_feature complement(2284931..2285509) /locus_tag="B565_2037" /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase...; Region: crotonase-like; cd06558" /db_xref="CDD:119339" misc_feature complement(order(2285114..2285116,2285123..2285128, 2285198..2285206,2285210..2285212,2285330..2285344, 2285357..2285359,2285453..2285455,2285459..2285461)) /locus_tag="B565_2037" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(2285198..2285200,2285336..2285338)) /locus_tag="B565_2037" /note="oxyanion hole (OAH) forming residues; other site" /db_xref="CDD:119339" misc_feature complement(order(2284931..2284933,2284940..2284942, 2284985..2284987,2284994..2284996,2285027..2285029, 2285036..2285041,2285045..2285050,2285054..2285059, 2285072..2285077,2285081..2285089,2285093..2285095, 2285111..2285122,2285162..2285173,2285234..2285236, 2285258..2285260)) /locus_tag="B565_2037" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" misc_feature complement(2284067..2284606) /locus_tag="B565_2037" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(2283776..2284060) /locus_tag="B565_2037" /note="3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; Region: 3HCDH; pfam00725" /db_xref="CDD:189688" gene complement(2285539..2286849) /locus_tag="B565_2038" /db_xref="GeneID:10487955" CDS complement(2285539..2286849) /locus_tag="B565_2038" /codon_start=1 /transl_table=11 /product="3-ketoacyl-CoA thiolase" /protein_id="YP_004392690.1" /db_xref="GI:330829738" /db_xref="GeneID:10487955" /translation="MKQPLKLTTRQGERIAVVAGLRTPFAKQATAFHGVPAVDLGKLV VSEMLARTDLDPKLIDQLVFGQVVQMPEAPNIAREIVLGTGMSVNTDAYSVSRACATS FQAVANVTESIMAGTVDIAIAGGADSSSVLPIGVSKKLARALVDLNKARNLQQRFNIL RTLRVKDLLPVPPAVAEYSTGLSMGQTAEQMAKSHQISREAQDALAHRSHTLAALAWA DGKLSGEVFTAHVPPYKSPLERDNNIRESSDLTSYAKLKPVFDRVHGTVTAANATPLT DGAAAVLLMREGRAKELGLEPLGYIRSFAFSAIDVWQDMLMGPSYATPLALDRAGITL GDLTLIDMHEAFAAQTLANLKMFASHDFARDKLGRDQAIGEVDMEKFNVLGGSLAYGH PFAATGARMITQTLHELRRRGGGLGLNTACAAGGLGVAMVLEVE" misc_feature complement(2285542..2286825) /locus_tag="B565_2038" /note="3-ketoacyl-CoA thiolase; Reviewed; Region: fadI; PRK08963" /db_xref="CDD:181597" misc_feature complement(2285545..2286804) /locus_tag="B565_2038" /note="Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and...; Region: thiolase; cd00751" /db_xref="CDD:29411" misc_feature complement(order(2285572..2285577,2285863..2285865, 2285926..2285928,2285932..2285934,2285938..2285940, 2286460..2286462,2286505..2286507,2286514..2286519, 2286538..2286540,2286562..2286573,2286604..2286606, 2286616..2286618,2286625..2286627,2286667..2286669, 2286748..2286750)) /locus_tag="B565_2038" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29411" misc_feature complement(order(2285584..2285586,2285674..2285676, 2286553..2286555)) /locus_tag="B565_2038" /note="active site" /db_xref="CDD:29411" gene 2287032..2287982 /locus_tag="B565_2039" /db_xref="GeneID:10487956" CDS 2287032..2287982 /locus_tag="B565_2039" /codon_start=1 /transl_table=11 /product="MoxR-like ATPase" /protein_id="YP_004392691.1" /db_xref="GI:330829739" /db_xref="GeneID:10487956" /translation="MAAAEFRALRDYLGSQILGQEELIEGLLIALLCEGHVLIEGAPG LAKTRAVKALAGAVEGRFARIQFTPDLLPADLTGSEVFHPQDASFVFQPGPLFNHLVL ADEINRAPAKVQSALLEATAEHQITVGKKSWRLPPLFMVAATQNPIEQEGTYPLPEAQ LDRFLLKLMVDYPSPTLELAILQLNASGEQLGAAPVTLSQTNLQRARSEVLAVTMQSR LEHYLVELVCATRPGSGLCPALEPLIAVGASPRATLGLARSARARAWLAGRDYVLPED IQLQAYPVLRHRLIPSYQALADNLDNDILIAQLLDQVPCP" misc_feature 2287137..2287979 /locus_tag="B565_2039" /note="MoxR-like ATPases [General function prediction only]; Region: COG0714" /db_xref="CDD:31058" misc_feature 2287137..2287529 /locus_tag="B565_2039" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" gene 2287973..2288875 /locus_tag="B565_2040" /db_xref="GeneID:10487957" CDS 2287973..2288875 /locus_tag="B565_2040" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392692.1" /db_xref="GI:330829740" /db_xref="GeneID:10487957" /translation="MPLEPGLHPDIALSLPRLLNIRLWAKAKKPPHAGRSSSERGKPG RSPGLTFRELRAYQAGDEVRHIDWRVTARLGRPYTRLYSEELDQAHWLLLDLSPAMYF GSMLQLKARLGCELAAALIWQGEKQHNTLICHGLIPHHQSQRGSVLPLLESLCHHYQQ GLARRPLSHSLADTLSGVKLPHGAKLTIITDHRPCESTLCQQLQLLSRRHDIHYWQIR DPLEAALPQGGQLPVAIDRPGQHYQGWLDGGHDGFSRRYRQAAEHQLAHSKQQLLPLV QCLYLLDNSQTLQQQWQEGLCHQG" misc_feature <2288015..2288644 /locus_tag="B565_2040" /note="Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]; Region: COG1721" /db_xref="CDD:31907" misc_feature 2288114..2288359 /locus_tag="B565_2040" /note="Protein of unknown function DUF58; Region: DUF58; pfam01882" /db_xref="CDD:190149" gene 2288860..2289399 /locus_tag="B565_2041" /db_xref="GeneID:10487958" CDS 2288860..2289399 /locus_tag="B565_2041" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392693.1" /db_xref="GI:330829741" /db_xref="GeneID:10487958" /translation="MSSGMISPAELDSASPASDAITPPLAALMRDIHPGPDLIEQNLD PRVQALLWLLIAGFLLLMIVLIARRVIRYRRWCRQLEGDPALLVAQIQEALRHEALQR WPEARQLQGEAWLAFIDRHGGSNFSQFSSHWSSWLYGSQNPTREQCEQLQQHYRRWGQ TLFFQLAPRSRRKTARRHP" gene 2289396..2290388 /locus_tag="B565_2042" /db_xref="GeneID:10487959" CDS 2289396..2290388 /locus_tag="B565_2042" /codon_start=1 /transl_table=11 /product="von Willebrand factor type A domain-containing protein" /protein_id="YP_004392694.1" /db_xref="GI:330829742" /db_xref="GeneID:10487959" /translation="MILAWPWFALALVLPLLVRFGLPPLRRGYLAHPGFALLRPQAGL PLWRAMLLWCALILALCRPQWWGEPVIQYEGSRDLLLAVDLSDSMRTPDMLDNGEQQA RLTAVRQQIKALIAKRAGDRVGIIVFADHAYLLSPLTQEIPALLTLSDELDFDLVGRT TALGEAILLARQHGDPGRPTALLLVTDGRNTAGNADPLQEAKLAAAQGIRIYTLGVGA DPDTFIQPYDEAGSGQADPSSELDEPLLKELAQTGQGRYFRARTQSDLDTINVTLNAL EPAPMPIAQYQPVIELYPWPLALLCGLLLLPSGHGRLEFRMVRSWLTRGARRWI" misc_feature 2289624..2290193 /locus_tag="B565_2042" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cl00057" /db_xref="CDD:197401" misc_feature order(2289645..2289647,2289888..2289890,2289954..2289956) /locus_tag="B565_2042" /note="metal ion-dependent adhesion site (MIDAS); other site" /db_xref="CDD:29222" gene 2290379..2291830 /locus_tag="B565_2043" /db_xref="GeneID:10487960" CDS 2290379..2291830 /locus_tag="B565_2043" /codon_start=1 /transl_table=11 /product="von Willebrand factor type A domain-containing protein" /protein_id="YP_004392695.1" /db_xref="GI:330829743" /db_xref="GeneID:10487960" /translation="MDLILLRPLWLIALIPWLWQGWRRRRQPPLLAPAMQAYLLPASR PQRPWLWLATLPVILALSGPALRGELQQQPAAPLDIWLLDLSRSMTATDLKPDRATRV RWQLQQLLSRAKGERIALILYAGDAYLAMPPTRDHQALSLLLPDLRPDIMPLQGSNPA RAVELAMTQLAPGEQARLLLITDDLTHNQMTQIAALWPCQQRLLCRDTQSARLDILLA NSGQPAPMPAIPANELGFATRMPAQLPAPDSQAIAALANRLGGELQWLGSDVPHFAPL PTTTSALTPAPLDLGPWLLIPLLPLALLARVGARLMVALMLGAQLLAPQDLQATERGD LQAMQAYQEGDFQRAARTFNDPVWRGNAWYRAGAYRPAIAAYQEAESATAHYNRGNAL LQLGEFAAAKEAYLAALALEPGHEDALYNLSLLQGAAAAAPDTSNSKQPKPSAEQQAA AMPLPPSPPVLLLEQRLRKEALRRDLIKVEEPW" misc_feature 2290625..>2290927 /locus_tag="B565_2043" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cl00057" /db_xref="CDD:197401" misc_feature order(2290628..2290630,2290859..2290861,2290925..2290927) /locus_tag="B565_2043" /note="metal ion-dependent adhesion site (MIDAS); other site" /db_xref="CDD:29222" gene 2291884..2293362 /locus_tag="B565_2044" /db_xref="GeneID:10487961" CDS 2291884..2293362 /locus_tag="B565_2044" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392696.1" /db_xref="GI:330829744" /db_xref="GeneID:10487961" /translation="MPPRAELLPGADPSDWLLIIEADGERQSSELEITPLLRQFAVGR VTMSRVTTPVQQLTRWQIPLHQSNSPANTEVVIAPLKLGNEFTPSLTLPLREEKTAAL PQPAAPSPLEMQASLDHQGPLYPGQPVIYRLTLWLPTSMQNPALSELSSAHFTIRRLG SDERIAPAQAGLPGRLTRSWLVQAKAPGLWHLDSPRLQGQLTPQGGKPQKLSARAAPL EVRVDKAPATPVATRLTLSQRLEPATTGEVGEPLIRILTLTMENGDSGQIQLAPLMAH QLPSGIQAHPDGEQQQERYRDGKLLFERQWRQTLVAEQSGDYQLPPIDLPWFNTQSSR IEQANLPAITLTFQATTNRQPDQQTSQVALRESLWWVVLAVALRALWRHWPRWRAFYQ LQRALAQQQPDASRKALIKWATMRWQVSYYQLGQLPEAGHNRLGNGLAALERACFARP SSGPPIEWRALARTLRADETAGIAYLIYLLAHGSSRSRRHAP" gene 2293376..2293975 /locus_tag="B565_2045" /db_xref="GeneID:10487962" CDS 2293376..2293975 /locus_tag="B565_2045" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="YP_004392697.1" /db_xref="GI:330829745" /db_xref="GeneID:10487962" /translation="MALLFFRKKRAQQHIGGNDPATSPVSDPMADKQTKFEALVHALH GDLYRYAYWLTRDPNVAEDLVQETFLRAWKAIDTLQDDKAAKGWLITILRRENARRFE RKQLELVDLDDHPQPQHDALHSEQEMENEWLHRHIARLPEEYQEPLLLQVVGGFSGEE IAEMLGLNKNTVMTRLFRARNQIKEAMEQKNQARGHGHG" misc_feature 2293424..2293972 /locus_tag="B565_2045" /note="RNA polymerase sigma factor; Provisional; Region: PRK12517" /db_xref="CDD:183569" misc_feature 2293490..2293690 /locus_tag="B565_2045" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature 2293766..2293924 /locus_tag="B565_2045" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cl01055" /db_xref="CDD:197420" gene 2293968..2294747 /locus_tag="B565_2046" /db_xref="GeneID:10487963" CDS 2293968..2294747 /locus_tag="B565_2046" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392698.1" /db_xref="GI:330829746" /db_xref="GeneID:10487963" /translation="MDELEFRRNAMIQPHDQLPDFLKAAEASQANRNYLDEMKQFDRT LKRTMQVEVPAGLVERVLLRQAMQQDSDAPDDLPPSRPLGTAPVKIRTSTSWRQIALA ASVAFLLGMSTRWITLPETAPAALSLAQVAMAHVYGEEPFIEGVDEQVNLHNINAKME KYGATLSGMDGLKVTYVNHCSFYQGPALHMVIQGKMGPVTLFLVPKHVPLTLQQATFE DGTLKGEIVQLKGANMVLIGEMREPLAPVANALQSRLQWDI" misc_feature 2293968..2294735 /locus_tag="B565_2046" /note="Protein of unknown function (DUF3379); Region: DUF3379; pfam11859" /db_xref="CDD:152295" gene 2295150..2296430 /locus_tag="B565_2047" /db_xref="GeneID:10487964" CDS 2295150..2296430 /locus_tag="B565_2047" /codon_start=1 /transl_table=11 /product="Long-chain fatty acid transport protein 1" /protein_id="YP_004392699.1" /db_xref="GI:330829747" /db_xref="GeneID:10487964" /translation="MTTTIFKKSLIAATIALATGQVHAAAFQLNEHSASGLGRAYAGE AAIADNASVLARNPAAMTTFDKMAVSVSGTYIKPDVDVEGTIPLRGVSASQDDIAPAA FVPASYFIQPINDQWAWGIGLFSNYGLSTEYDKSFNAGSGAGDTSLVTFNINPNIAYR INEQFSIGAGINAVYGAAELNRFNGDLIPQLPNATRVSHMKGDTWGFGWNIGTLYEIN ENNRLALTYRSQVDMSFDGDYSNDLPAIAGGLAGRTIDGNLKLDLPAQAEFAGYHRLN QQFAVHYSVNWTDWSAFQELKATSSSGATLLQKDEKFKDSTRYAIGGTWYINPVWEAR LGFAYDKTPIEAEYRSLSIPDSDRIWYSAGTTYHFNQDMSLDFGLTYIDGKKVDVDES LGATHGPASLQNPHWVGTSHGDAFLASVGFNMKF" misc_feature 2295153..2296427 /locus_tag="B565_2047" /note="Long-chain fatty acid transport protein [Lipid metabolism]; Region: FadL; COG2067" /db_xref="CDD:32250" misc_feature 2295159..2296427 /locus_tag="B565_2047" /note="Outer membrane protein transport protein (OMPP1/FadL/TodX); Region: Toluene_X; cl09488" /db_xref="CDD:195847" gene 2296683..2297951 /locus_tag="B565_2048" /db_xref="GeneID:10487965" CDS 2296683..2297951 /locus_tag="B565_2048" /codon_start=1 /transl_table=11 /product="Long-chain fatty acid transport protein" /protein_id="YP_004392700.1" /db_xref="GI:330829748" /db_xref="GeneID:10487965" /translation="MHPIIKPSAIALLVIAGQTHAAGFQLAEQSATGLGRAFAGEAAI ADNASVLSRNAAAMTRFDQMALSGGVIYVSPDVNIEGNTRLPTKAGIVTSDASAHDIA AAAWVPNAYLIIPLNEQWRLGFSATSYYGLGVKMPDNYSAGHFGNVSDIKTMDLGTSL AYRINEMWSIGAGISAIQGEGEVGGTFPSRNLIAKHLQGDGWAWGWNVGTLLELSEQT RIGLSYRHDVTLTLSGDAILGRPNADGSVTEIRDTGSLDLPLPATAELAAFHQLTDKL ALHGSLNWTNWSKFVQLEADLNNLQNMHIKDEHWEDSWRYAIGMTYQVTPKWQLRSGV AYDASPVPADRRTISIPDADRLWYSVGMGYQFTPNLTVDLGLTLIDGKKVDVTEKMEL QPGNPMTTSTFQGTSEGDAWLAGAQLSYLF" misc_feature 2296707..2297948 /locus_tag="B565_2048" /note="Long-chain fatty acid transport protein [Lipid metabolism]; Region: FadL; COG2067" /db_xref="CDD:32250" misc_feature 2296707..2297948 /locus_tag="B565_2048" /note="Outer membrane protein transport protein (OMPP1/FadL/TodX); Region: Toluene_X; cl09488" /db_xref="CDD:195847" gene 2298067..2299290 /locus_tag="B565_2049" /db_xref="GeneID:10487966" CDS 2298067..2299290 /locus_tag="B565_2049" /codon_start=1 /transl_table=11 /product="sensory box/GGDEF family protein" /protein_id="YP_004392701.1" /db_xref="GI:330829749" /db_xref="GeneID:10487966" /translation="MYSYVARQPILDRDLNTHAYELLFRDSLNNVFPSISSQQATSRL VVEQFLQQNIDQLLGGRPCFINFPHSLLLEGLAECLPPEKVVIEILEDSPPDDALLEK VKQLHKLGYQLALDDFTMSPDWERFLPFINIIKFDLRATSLFQIKVFIKRHQALGLTY LAEKVEDKAEFKRVKQLGIQLFQGFFFSRPEMVKQATMEPAQVVVMQLLNVVNETEPD INKIEQLLSQDISLSLKLLRYVNHLKGHTNTISSFRQAAIYLGNTQLKRFVSLVAATS AGKGKSAELYQMSMIRARFCELLAHAHAPSQQAQQAFITGLFSLLDVLMEQPMDKLLG TIPLIDDIRLALLERKGNLGFYLAFCEDYESANWSRVTARTARLGLSEDKVSHLYLAA TTWVTEQLLAMEATN" misc_feature 2298067..2299260 /locus_tag="B565_2049" /note="Predicted signal transduction protein containing EAL and modified HD-GYP domains [Signal transduction mechanisms]; Region: COG3434" /db_xref="CDD:33240" misc_feature 2298088..2298636 /locus_tag="B565_2049" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cl00290" /db_xref="CDD:193752" misc_feature 2298712..>2298963 /locus_tag="B565_2049" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" gene complement(2299287..2300462) /locus_tag="B565_2050" /db_xref="GeneID:10487967" CDS complement(2299287..2300462) /locus_tag="B565_2050" /codon_start=1 /transl_table=11 /product="acetyl-CoA acetyltransferase with thiolase domain" /protein_id="YP_004392702.1" /db_xref="GI:330829750" /db_xref="GeneID:10487967" /translation="MDIAIVAAKRTPMGAFQGALAEVTAPELGACAIEAALQQSGLRP EQVDEVFMGNVLAAGVGQAPARQALLKAELPDSVPATTVNKVCGSGMKAVMLAADTIR LGDNRVVVAGGMESMSRAPYLLDNARNGFRMGHQKVLDHLFLDGLQDAYDGQLMGVHA QRSADQAGLTRSAMDEFALASLQRARDAQQAGAFASELASVYRGDRLLLAEDEQPGKG RPEKIPTLKPAFGKEGTITAANSSSISDGAAALILMDGATAQAWQVPVLARIVGYQSH AALPAEFTSAPIGAISRLLARLAWSVEEVDLFEINEAFAMVTMLAMSGVGIPHHKVNV HGGACALGHPLGASGARILVTLIAALRQRGLRRGVAALCIGGGEATAIAVEVNDEPN" misc_feature complement(2299305..2300459) /locus_tag="B565_2050" /note="putative acyltransferase; Provisional; Region: PRK05790" /db_xref="CDD:180261" misc_feature complement(2299305..2300453) /locus_tag="B565_2050" /note="Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and...; Region: thiolase; cd00751" /db_xref="CDD:29411" misc_feature complement(order(2299332..2299337,2299572..2299574, 2299632..2299634,2299638..2299640,2299644..2299646, 2300109..2300111,2300154..2300156,2300163..2300168, 2300187..2300189,2300211..2300222,2300253..2300255, 2300265..2300267,2300274..2300276,2300316..2300318, 2300397..2300399)) /locus_tag="B565_2050" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29411" misc_feature complement(order(2299344..2299346,2299434..2299436, 2300202..2300204)) /locus_tag="B565_2050" /note="active site" /db_xref="CDD:29411" gene 2300585..2300977 /locus_tag="B565_2051" /db_xref="GeneID:10487968" CDS 2300585..2300977 /locus_tag="B565_2051" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_004392703.1" /db_xref="GI:330829751" /db_xref="GeneID:10487968" /translation="MNNMDEGRRFSISELAREFDITTRSIRFYEDQGLLNPAREGQTR IYSKQDRVRLKLTLRGKRLGFSLAEIRELFDLYDADKSSRTQLQTMLGLVEEKRETLQ QQMEDIRMVLLELDAAEQRCQQALSQLG" misc_feature 2300612..2300962 /locus_tag="B565_2051" /note="Helix-Turn-Helix DNA binding domain of the regulatory protein GnyR; Region: HTH_GnyR; cd04776" /db_xref="CDD:133403" misc_feature 2300612..2300962 /locus_tag="B565_2051" /note="Predicted transcriptional regulators [Transcription]; Region: SoxR; COG0789" /db_xref="CDD:31132" misc_feature order(2300615..2300623,2300663..2300665,2300711..2300719) /locus_tag="B565_2051" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133403" misc_feature order(2300750..2300752,2300759..2300761,2300771..2300776, 2300801..2300803,2300864..2300866,2300876..2300878, 2300894..2300896,2300906..2300908,2300915..2300920) /locus_tag="B565_2051" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:133403" gene complement(2301084..2301230) /locus_tag="B565_2052" /db_xref="GeneID:10487969" CDS complement(2301084..2301230) /locus_tag="B565_2052" /codon_start=1 /transl_table=11 /product="ribosomal L25p family" /protein_id="YP_004392704.1" /db_xref="GI:330829752" /db_xref="GeneID:10487969" /translation="MILAQEKPEFYESVLTLVINGEEVNVKVKAIQRHPVRYKLIHLD FVRV" misc_feature complement(2301090..>2301206) /locus_tag="B565_2052" /note="Ribosomal_L25_TL5_CTC: Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain. L25 is a single-domain protein, homologous to the N-terminal domain of TL5 and CTC, which each contain two domains. CTC is a known stress protein, and proteins of this...; Region: Ribosomal_L25_TL5_CTC; cl00787" /db_xref="CDD:186187" misc_feature complement(order(2301090..2301095,2301144..2301146, 2301156..2301158,2301192..2301194)) /locus_tag="B565_2052" /note="CTC domain interface; other site" /db_xref="CDD:88604" misc_feature complement(order(2301093..2301095,2301117..2301122, 2301126..2301128,2301138..2301140,2301147..2301152)) /locus_tag="B565_2052" /note="L16 interface [polypeptide binding]; other site" /db_xref="CDD:88604" gene complement(2301488..2302366) /locus_tag="B565_2053" /db_xref="GeneID:10487970" CDS complement(2301488..2302366) /locus_tag="B565_2053" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392705.1" /db_xref="GI:330829753" /db_xref="GeneID:10487970" /translation="MLGIWLSVAQVVISGYQPIAEQTWVQLNPEYYPLARTPPAMFVA WRGNQFPPLAQKQKHGRWQILFPARLVPPFDLFEGEAQLSKNYLARLRRIDEMAYGVA PGQVAAIVQQGSGSPAYHAQPVAPFIAEFRTPQDAFGGVDMLTDPAENEPLLVQLGVT FRTAGMSGAQGYEGVASTDMALASHTASLSAGSDVMLTLSAPAAGGSQTVCHQVAAGE TLWRIANQLSSAQGADTYSYLLALVAENQQRLGKSIRVRTGEGLYCPRAETLARFDAL SPAQRQQQFARLEQRR" gene complement(2302462..2306361) /locus_tag="B565_2054" /db_xref="GeneID:10487971" CDS complement(2302462..2306361) /locus_tag="B565_2054" /codon_start=1 /transl_table=11 /product="ATP-dependent helicase HrpA" /protein_id="YP_004392706.1" /db_xref="GI:330829754" /db_xref="GeneID:10487971" /translation="MSLSIEALRRRLSACMNLDARRLSSRLHGVKKLPEGKQAAVLET ISADLDAAQARYQTRLAGVPKVTYPDNLPVSQKQAEIAKAIQEHQVVIIAGETGSGKT TQIPKICLALGRGVKGFIGHTQPRRLAARTVAARIAEEMESELGHYVGYKVRFTDQVS EQTHIKLMTDGILLAEIQNDRMLTQYDTIIIDEAHERSLNIDFILGYLKQLLPKRPDL KVIITSATIDPQRFSRHFNKAPVIEVSGRTYPVEVRYRPLTSDKSEGLEERDELQGIF DAVEELAREGLGDILIFMNGEREIRDTADALRKLNLRDTEVLPLYARLSNAEQNKVFQ QHAGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSWRTKVQRLPIEPVSQASANQ RKGRCGRVADGICIRLYSEEDFNSRPAFTDPEILRTNLASVILQMLALGLGNMEAFPF VEPPESRHIKDGLTLLKELEAVRELPATGEREAKLQLTETGRQLSRIPLDPRLAKMVI SAAQTGCLSEVMVITAALSIQDPRERPMEKKQAADEQHRRFEDKDSDFLAFVNLWNYL KEQQDALGSNPFRRMCQKEFLSYLRVREWQDIHFQLRQTVKELGFKANHEPADFKTVH CALLTGLLSHIGNKDLEKPEFLGARNGRFHLFPASGLFKKPPKWVMAAELVETSRLYA RINAKIEPEWVEPLAGHLIKLHHSDPHWSKKNGAVMAKEKVTLYGLTLVNERTINFSR IDPALCRELFIRRALVEGDFETRHRFFSDNRKLLAEVEALEHKSRRRDILVDDEDLFR FYDARLPEEVISARHFDKWWKEAQKRDPELLNFEKEMLMKGDAAHISDLDYPNFWQQG RLKLKLTYQFEPGEAADGVTLHIPLPLLNQVEVKGFEWLIPGLRHELLVALIKSMPKP MRKNFVPAPNYADALLASINPEQGPLLDEMERQLRRMTGVTVPRESWDWNAVPDHLKL TFRVVDDKHKKVAEGKDLEALKESLRGKVQETLSQVADDDIEQSGLTLWSFGELPQEY SQKRGGFEVKAYPALVDEKDSVAIQLVESPVVQQQLMWAGQRRLVLLNVPSPIKYLQE KLPNKAKLGLYFNPFGKVAELIDDCIACGCDKLIEQHGGLAWDEAGFEALKEFVRAEL NDAVVEVAKQVEAVLTLSHEIKKRLKGKMQLDTAFAMSDIQQQLGNLIHKGFVTETGW QRLPDLLRYLRAIERRLEKLAIDPNRDRVYMLKVHSVESEYKALLAKIPKSQLIPTEV ANIRWMIEELRVSFFAQNLGTPYPVSDKRVLNAIAQC" misc_feature complement(2302465..2306361) /locus_tag="B565_2054" /note="ATP-dependent RNA helicase HrpA; Provisional; Region: PRK11131" /db_xref="CDD:182986" misc_feature complement(2305681..2306097) /locus_tag="B565_2054" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature complement(2306056..2306070) /locus_tag="B565_2054" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature complement(2305777..2305788) /locus_tag="B565_2054" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature complement(2305138..2305545) /locus_tag="B565_2054" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature complement(order(2305321..2305329,2305396..2305401, 2305468..2305479)) /locus_tag="B565_2054" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(order(2305165..2305167,2305174..2305176, 2305186..2305188,2305303..2305305)) /locus_tag="B565_2054" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(2304682..2304981) /locus_tag="B565_2054" /note="Helicase associated domain (HA2); Region: HA2; cl04503" /db_xref="CDD:194889" misc_feature complement(2304262..2304561) /locus_tag="B565_2054" /note="Oligonucleotide/oligosaccharide-binding (OB)-fold; Region: OB_NTP_bind; pfam07717" /db_xref="CDD:191824" misc_feature complement(2302465..2304228) /locus_tag="B565_2054" /note="Domain of unknown function (DUF3418); Region: DUF3418; pfam11898" /db_xref="CDD:192868" gene complement(2306602..2307024) /locus_tag="B565_2055" /db_xref="GeneID:10487972" CDS complement(2306602..2307024) /locus_tag="B565_2055" /codon_start=1 /transl_table=11 /product="CBS domain-containing protein" /protein_id="YP_004392707.1" /db_xref="GI:330829755" /db_xref="GeneID:10487972" /translation="MESLKAKDYMQSRPITFTADMMVQAAVEKFLNSHQLGGPVVDGQ GHLIGWISEQDCIAVLLKEAYHCEQVAQVKDVMRKEVLSVGPDTSILSLAEMMMGQKP KIYPVVEEGRLLGVINRHNVMQAIHAQLTTCFVHHTHG" misc_feature complement(2306656..2307006) /locus_tag="B565_2055" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature complement(2306650..2306988) /locus_tag="B565_2055" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair_16; cd04629" /db_xref="CDD:73127" gene complement(2307145..2308365) /locus_tag="B565_2056" /db_xref="GeneID:10487973" CDS complement(2307145..2308365) /locus_tag="B565_2056" /codon_start=1 /transl_table=11 /product="HD domain-containing protein" /protein_id="YP_004392708.1" /db_xref="GI:330829756" /db_xref="GeneID:10487973" /translation="MYALSASLDLVGIGDVAHGKRVGIMAAECSRELGMSEAERCLLF ELGVLHDIGVSSTITHHHLVSEFDWESSQRHCEVGYQLLKDFRLLAPLALPIRYHHTH WHLLREMADVDLNVARQANLIFLVDRCDALAAPYYGDGSLLMHTNEIRARLQDFRDEF FAPELVDAFLKASRSEAFWLQLEARSINDYMLEMLQVREPCLTFNGELKALAQIFSGI VDAKSPFTMTHSLGVSRLSRALAEQMGVSAIHCDMLEIAGLLHDLGKLRVPDEILDKP ASLTKEERAIINSHSFETYQILRHIEGFEEIACWAAYHHEEPDGEGYPFHLPASAMAL EARILRVADIFQAMVQDRPYRRGLPARDALTFMQQLADQGRVDPAVVAVLADHLPQMM MAAIPDREPDHAIN" misc_feature complement(2307946..2308314) /locus_tag="B565_2056" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature complement(order(2307985..2307987,2308213..2308218, 2308312..2308314)) /locus_tag="B565_2056" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature complement(2308213..2308215) /locus_tag="B565_2056" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature complement(2307265..2307696) /locus_tag="B565_2056" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature complement(order(2307337..2307339,2307580..2307585, 2307679..2307681)) /locus_tag="B565_2056" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature complement(2307580..2307582) /locus_tag="B565_2056" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene complement(2308729..2308902) /locus_tag="B565_2057" /db_xref="GeneID:10487974" CDS complement(2308729..2308902) /locus_tag="B565_2057" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392709.1" /db_xref="GI:330829757" /db_xref="GeneID:10487974" /translation="MGSFIQKAEVSTAIDGDKANKWVMEFTVRLINLGDESCYEHCGV PLFKYLTGKSSTL" gene 2309282..2310805 /locus_tag="B565_2058" /db_xref="GeneID:10487975" CDS 2309282..2310805 /locus_tag="B565_2058" /codon_start=1 /transl_table=11 /product="Arylsulfatase A" /protein_id="YP_004392710.1" /db_xref="GI:330829758" /db_xref="GeneID:10487975" /translation="MATAGSATAAAKPNILAIMGDDIGYWNISAYNQGMMGYQTPNLD RIANEGALFTDHYGQQSCTAGRAAFITGEEPFRTGLLTIGMPGSTHGIPDWAPTIGDL LKEQGYMTAQFGKNHLGDQNQHLPTKHGFDEFFGNLYHLNAEEEPETYYYPKDPEFKK KFGPRGVIKSSADGKIEDTGPMTRKRMEHADEEFLESSLAFMEKAVKAKKPFFIWHNA TRMHVWTRLQEKYQGKSGVSIYADGMLEHDDQVGILLDKLDELGVADNTIVIYTTDNG AETVSWPDGGTTPFYGEKGTTWEGGMRVPQLVRWPGVIKPGTKVNAMMAHQDWMPTLL AAAGVPDVKEKLAKGYKANGKQWRVKLDGYNFMPYLAGKADTSPRNSMLYFSSNGELN AVRWNDFKLNFATMEGNITDAARVTPNWPQIINLRADPFEKAPHESGMYLRWMADNMW LFVPAQGILKEFFDTLPNYPMQQSFQMNPASISSQSLMLKGKLAELDALKQKVATIK" misc_feature 2309315..2310577 /locus_tag="B565_2058" /note="Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]; Region: AslA; COG3119" /db_xref="CDD:32933" misc_feature 2309318..2310370 /locus_tag="B565_2058" /note="Sulfatase; Region: Sulfatase; cl10460" /db_xref="CDD:195965" gene 2310949..2311926 /locus_tag="B565_2059" /db_xref="GeneID:10487976" CDS 2310949..2311926 /locus_tag="B565_2059" /codon_start=1 /transl_table=11 /product="MoxR-like ATPase" /protein_id="YP_004392711.1" /db_xref="GI:330829759" /db_xref="GeneID:10487976" /translation="MNSLQQQISQLIEQVGLSVVGQSHVIRALVIGLLTNSHVLLEGL PGTAKTRSVKALAEALNTSFGRIQFTPDLLPSDVTGTEMYQERDGAHQLRFQPGPIFN SIVLADEVNRAPAKVQAALLEAMAEGTVTVGDKIHRLPELFMVLATQNPIEQEGTYPL PEAQMDRFALKVSVAYPDDEAELAIIRLVRAEERGTRQQNEGFAPLSPELILQARSEL SAMTVSPLVEHYIIALVMATRHPDRYPATGLPQWIAVGASPRASIALDKCARAYAWLQ GRNHVLPDDVRAMVPSVLGHRFTLSYDALADGVDHQQVVMTLLDHVVIG" misc_feature 2310985..2311920 /locus_tag="B565_2059" /note="MoxR-like ATPases [General function prediction only]; Region: COG0714" /db_xref="CDD:31058" misc_feature 2311006..2311476 /locus_tag="B565_2059" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 2311075..2311098 /locus_tag="B565_2059" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(2311078..2311101,2311270..2311272,2311393..2311395) /locus_tag="B565_2059" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature <2311258..2311845 /locus_tag="B565_2059" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 2311258..2311275 /locus_tag="B565_2059" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 2311447..2311449 /locus_tag="B565_2059" /note="arginine finger; other site" /db_xref="CDD:99707" gene 2311935..2312918 /locus_tag="B565_2060" /db_xref="GeneID:10487977" CDS 2311935..2312918 /locus_tag="B565_2060" /codon_start=1 /transl_table=11 /product="MoxR protein" /protein_id="YP_004392712.1" /db_xref="GI:330829760" /db_xref="GeneID:10487977" /translation="MTPRSLSHDRLTQCGQPPSGDPRIHCDYLTLVRLQGLVGQFSLL PRLNSGNLLCGRHPSSFRGRGLNFEELRHYQQGDDIRTLDWKVTLRTGRPHVRSYSEE KDRHVILCVDQRSCMFFSSVEMMKSVVAAEVAALLGWQVLKENDRVGLAILHCDGVAW LRGQRSRGHWLAGLRQLCAANHALSATSRDSEATGLAPLLAMLGRLKLKNTTLIFLSD WAGVTEADLTRLGYLQQHNDVLALHIADPLESTLSTTAADASWVVGDGQYQLNIAPHL IPVLDQGLARQQQLKKDQLLRLMALKGLPLITLDTGGHHLARLITALGGDH" misc_feature <2312061..2312615 /locus_tag="B565_2060" /note="Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]; Region: COG1721" /db_xref="CDD:31907" misc_feature 2312127..2312384 /locus_tag="B565_2060" /note="Protein of unknown function DUF58; Region: DUF58; pfam01882" /db_xref="CDD:190149" gene 2312918..2313439 /locus_tag="B565_2061" /db_xref="GeneID:10487978" CDS 2312918..2313439 /locus_tag="B565_2061" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392713.1" /db_xref="GI:330829761" /db_xref="GeneID:10487978" /translation="MNHKLPGTYMLRELQDVTVPPTISWQPQTAGWLLLALSLGALAL LWLYHRAQRWWQQRYRREAQAALSTINWSDAGASLALFHLIKQVLTHLDPRHGKLFGM ALLQTLDNAMADRQPRFATELGERWLVSLVCDQVVLSVSDQLCLVSLCNDWLAHHQTP IQTASLATEAHHA" gene 2313432..2314475 /locus_tag="B565_2062" /db_xref="GeneID:10487979" CDS 2313432..2314475 /locus_tag="B565_2062" /codon_start=1 /transl_table=11 /product="von Willebrand factor, type A" /protein_id="YP_004392714.1" /db_xref="GI:330829762" /db_xref="GeneID:10487979" /translation="MLDAGLEFAHPHCFWLLPLPWLVFRLIPAYRTRQSAIKVPFFDL LIDLLDEPPREGATQLTASWWQRIALITVWLLTVVALAKPTIYGPPQVRERFGRDVMI VLDLSGSMAETDFSPDPGKSLSRLDAAKEVLKQFAATREGDRLGLILFGDAAFLQAPF TADLETWQTLLQETDVAMAGQSTHLGDAIGLAIKVFNNSDRHGQQDQNSAKREKVAII LTDGNDTGSFVSPRDAARVAAVNGVRLHTIAMGDPATVGEQALDLDTLQQLATLTGGQ LFQALDEAQLTRAYQVIGELEPQRYESTRFQTRESLHHYLIAVSVGLYLTLFSLLTLR RYRLRTALSGDTP" misc_feature 2313720..2314289 /locus_tag="B565_2062" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cl00057" /db_xref="CDD:197401" misc_feature order(2313744..2313746,2313990..2313992,2314092..2314094) /locus_tag="B565_2062" /note="metal ion-dependent adhesion site (MIDAS); other site" /db_xref="CDD:29222" gene 2314472..2316202 /locus_tag="B565_2063" /db_xref="GeneID:10487980" CDS 2314472..2316202 /locus_tag="B565_2063" /codon_start=1 /transl_table=11 /product="von Willebrand factor, type A" /protein_id="YP_004392715.1" /db_xref="GI:330829763" /db_xref="GeneID:10487980" /translation="MMDPLYWQQLWLNAHFLRPWWLLALLPLVAILLLRWRMDEANSW QQRLPPHLREALTLGDTGWKKNLPLKVLGLLMGLAILICAGPTWSREPSPFGEDQGAL LILLDNSDSMLETDIAPNRLTRAKQKISDLLATRDGGRNGLVVFAGSAHTAMPLTRDN AVYDPILAAIRPEIMPKAGKRTEQVLPLLTELLADETGSTVLLVSDGISPSAIAPLAD YFRGQSRQLLILAAGDPALSGKRPLELASLRRLASDSDGTLLTMTVDNGDVERINRGI ERNFLIHNDSLMPWQDMGYYLLFPVVALLLLWFRKGWLVQWGLVAAIGLSLLQTTPAQ ATTFSLAPVEPTEPAINHWAKELKQQWLNLWLTPDQQGQWYFQQGDYLEAAKHYEDPF YKGVAYYYGAEFALAQSAFLQADSEQALLYAGNALARQREYLAARRLFRKLADEASDP SVRQSAAHNYQVMSGIVDEINRASQSQTGTPDGPDHSSELPDDEPRSANGAEETVASS LMARETLTADQILANPAQAEKWLRRVESDPGDFLQAKFRLQLQAQQTGATARPRSATH KEPTHVQPAQ" misc_feature 2314775..2315242 /locus_tag="B565_2063" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cl00057" /db_xref="CDD:197401" misc_feature order(2314790..2314792,2315018..2315020,2315087..2315089) /locus_tag="B565_2063" /note="metal ion-dependent adhesion site (MIDAS); other site" /db_xref="CDD:29222" misc_feature 2315579..2315797 /locus_tag="B565_2063" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature order(2315579..2315581,2315588..2315593,2315645..2315650, 2315654..2315659,2315666..2315671,2315732..2315737, 2315744..2315749,2315756..2315761) /locus_tag="B565_2063" /note="binding surface" /db_xref="CDD:29151" misc_feature order(2315585..2315587,2315621..2315623,2315633..2315635, 2315654..2315656,2315690..2315692,2315702..2315704, 2315711..2315713,2315741..2315743,2315777..2315779, 2315789..2315791) /locus_tag="B565_2063" /note="TPR motif; other site" /db_xref="CDD:29151" gene 2316228..2317565 /locus_tag="B565_2064" /db_xref="GeneID:10487981" CDS 2316228..2317565 /locus_tag="B565_2064" /codon_start=1 /transl_table=11 /product="BatD" /protein_id="YP_004392716.1" /db_xref="GI:330829764" /db_xref="GeneID:10487981" /translation="MATATLLGAVLLTVEAQAAEAADATDATQVTLKSWLKDQGEEKR PYAVNQQITLYLELATNRWFTAGTRIGQFELPGVMVKQRSELATNFTQRRNGETWSHQ RWELTLYPQQSGQFEIPAITVRATVARPEGGSRQITLTTHPQRFAAALPDPALTVGGR WLSASNLTLSQRWQRSADDRADGELRVGDAITRTVTASGQDTLSVLIPPLITPLASDG RVQAYPAQARLNDTQDRGEYLSTREDQTTYIVQRGGELTLPALELAWWNSQTGQLQTL TLPGQTLQVRHTPASWLAAYWHRLLGVASGVALLVLALLAMARYYRHHPRPLGWQYGA AIWSRQWGAVRVLAYRYLRAKRGWLELSRVSSDPAWEQQQVVFQQDPLDRADALRMGW HLLVRLQRRRGASLGNIRSWLGRIIGWQAALPELTPLTGKPTSAGQSSCNANR" gene 2317753..2318688 /locus_tag="B565_2065" /db_xref="GeneID:10487982" CDS 2317753..2318688 /locus_tag="B565_2065" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004392717.1" /db_xref="GI:330829765" /db_xref="GeneID:10487982" /translation="MLDIRSTELNLIPIFVAIYEERSLSRAATRMEISQPAVSKALKR LREIYGDPLFNRKVVGMEPTSFAIDIYPAMAAALKNFSSTLSTSRTFNPRTSQRVFSI ACVRLISAQLVPALLCKIRAHAPGISLEVHPLFTEDMESDLRMQRYDLIIDMTQSGRS MLKSEVLYGEQVKVVCASNHPRLGSDLTVEAYFTEEHVALAQWQVRGSMITAEHLPQM ANRNIVVRVPTAMEMLPIIACSEIIGVLPTSIINTFAGMYDVRVLPFPFEESVFSLSA IWHPSRTTEAGHRWLRQQLFEVVSELGLTTSIVQS" misc_feature 2317762..2318655 /locus_tag="B565_2065" /note="leucine transcriptional activator; Reviewed; Region: leuO; PRK09508" /db_xref="CDD:181918" misc_feature 2317777..2317953 /locus_tag="B565_2065" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 2318047..2318637 /locus_tag="B565_2065" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature order(2318092..2318097,2318101..2318106,2318113..2318115, 2318125..2318127,2318131..2318151,2318422..2318439, 2318455..2318460,2318464..2318469) /locus_tag="B565_2065" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene complement(2318685..2319452) /locus_tag="B565_2066" /db_xref="GeneID:10487983" CDS complement(2318685..2319452) /locus_tag="B565_2066" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392718.1" /db_xref="GI:330829766" /db_xref="GeneID:10487983" /translation="MLATTLLVAGCTLSVKQGNQPLHPLRQKVEADMVLVEEGRFDMG SNDPAAKASEGPQHTVSLNSFYMAKFEVTQALFEAVMGPSISYFQAPDVPVNNLSWQQ ANLFVTRLNELTGAHYRLPTEAEWEYAAKGGKLSKGYRYSGSDQIDEVAWYSGNAKNR AYPVGLKKPNELGLYDMTGNVGEFVADAYEETFYRHSPQENPNNAQQSKSHLAHKSVR GGSYAYEAELSENFRRDFASQSVMMADMGLRLVRDAR" misc_feature complement(2318697..2319365) /locus_tag="B565_2066" /note="Formylglycine-generating sulfatase enzyme; Region: FGE-sulfatase; cl00556" /db_xref="CDD:193867" gene complement(2319520..2320635) /locus_tag="B565_2067" /db_xref="GeneID:10487984" CDS complement(2319520..2320635) /locus_tag="B565_2067" /codon_start=1 /transl_table=11 /product="TPR repeat-containing protein" /protein_id="YP_004392719.1" /db_xref="GI:330829767" /db_xref="GeneID:10487984" /translation="MQRMLSRHEFRHTRSCTMGALWLALGMTLSGPTLAVASPEPPVT TSANGAPTASVAASAPSAAQIQQWAYSAQNISLPAVERADALRQLAAYPNQNSLVAVA RSLRDEHALVREAAVIAADPYQFAHRWRLLSPLLADSSAEVRRAATFNLARDYGAMNE GQLSAIGQPLAELSEYLARQQDPAQQLLQADLYRWTRQWDKAQASYEQLLANQPDNPQ LWLGLSDNLRAQQRDAEALALLNKGILALPQNANLHYAKALTQVRLDQKNEAAVTMAR AAELAGNNSYFWYLNGVLQEPLDLEKAIGSFELAYRISGAPEQLYAVCDIYLRHDHPK SDACMSELGKIAPPEVLAELNSKRASKTSTPPVSAGQ" misc_feature complement(2319787..2320059) /locus_tag="B565_2067" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(2319805..2319807,2319814..2319816, 2319826..2319828,2319862..2319864,2319907..2319909, 2319916..2319918,2319928..2319930,2319964..2319966, 2320009..2320011,2320018..2320020,2320030..2320032)) /locus_tag="B565_2067" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature complement(order(2319844..2319849,2319856..2319861, 2319868..2319873,2319949..2319954,2319961..2319966, 2319970..2319975)) /locus_tag="B565_2067" /note="binding surface" /db_xref="CDD:29151" gene complement(2320639..2321952) /locus_tag="B565_2068" /db_xref="GeneID:10487985" CDS complement(2320639..2321952) /locus_tag="B565_2068" /codon_start=1 /transl_table=11 /product="Arylsulfatase regulator" /protein_id="YP_004392720.1" /db_xref="GI:330829768" /db_xref="GeneID:10487985" /translation="MVITQGPQFNGKASKRMHVMAKPIGAVCNIDCTYCYYLSKQDLL EYKKGCSPQMDEQTLETYIRQYIEGQNTPEIIFSWQGGEPTLLGLDYFRKVVELQRKY QPQGVVIANDLQTNGILLNDEWCEFLAANNFLIGLSIDGPELLHNAYRVNRAGRGTFN QVMAAVALLHKYKVKFATLTCVNNLTSKNALEVYRFLRDEVKSPQMQFIPIVEQKSFR TTAPQTWQPQEQLKQGDKRLNPWHKNSVVEPWCVSAEGWGDFLITIFDEWVQRDLGRV FVQYFEASVETWMGRKNPLCTLGEICGKGLAMEPNGDVFACDHYVYPKYKIGNIHHQP LSELAYSPAQQAFGFAKSRSLARQCQQCDYQFACYGECPKNRFIRTHEGEAGLNYLCA GWYKFFSHIDQSMAYILRRAGYPVAHGKYRDSVMNNGVMTHGQRK" misc_feature complement(2320729..2321901) /locus_tag="B565_2068" /note="anaerobic sulfatase-maturating enzyme; Region: sulfatase_rSAM; TIGR03942" /db_xref="CDD:188457" misc_feature complement(<2321419..2321886) /locus_tag="B565_2068" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(2321539..2321541,2321605..2321613, 2321704..2321709,2321719..2321721,2321845..2321853, 2321857..2321859,2321863..2321865,2321869..2321871)) /locus_tag="B565_2068" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" misc_feature complement(2320780..2321049) /locus_tag="B565_2068" /note="radical SAM additional 4Fe4S-binding domain; Region: rSAM_more_4Fe4S; TIGR04085" /db_xref="CDD:188600" gene complement(2322641..2322907) /locus_tag="B565_2069" /db_xref="GeneID:10487986" CDS complement(2322641..2322907) /locus_tag="B565_2069" /codon_start=1 /transl_table=11 /product="ADP-ribosylglycohydrolase" /protein_id="YP_004392721.1" /db_xref="GI:330829769" /db_xref="GeneID:10487986" /translation="MKQRALAARSPNTGSVVRGSWRRKSRNQLGHASWLDVVEAALWC FWHGDDSASGEVLLGLLLGRDERVRLVYGLLVGAFYMGEPFKLE" gene 2323583..2324449 /locus_tag="B565_2070" /db_xref="GeneID:10487987" CDS 2323583..2324449 /locus_tag="B565_2070" /codon_start=1 /transl_table=11 /product="sensory box/GGDEF family protein" /protein_id="YP_004392722.1" /db_xref="GI:330829770" /db_xref="GeneID:10487987" /translation="MVINNGVFMSKTAINFSDIFIKYFPGFLSVRDSKHRIVYINEPF REWVASLTDMNIIGLTNDDICDLVDGNVANVFAQCHDLTLTYMDNNEESNKIMSFKFD DNVHYFDVTKFKSVVEDEVYIFTLATDITDSYNEKMLYQKQAKTDPLTGIYNRSVLED LQLKSDNLLIYMDLDNFKYINDSFGHLAGDKVLCDVANILKKTFRHDDYIVRMGGDEY LIIIDCTEDVDVKEALQEIEIRFKTKFQKNYPQLSFSFGYNRFESNIDTTLDIIDRKM YKNKATKKATPT" misc_feature 2324018..2324434 /locus_tag="B565_2070" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(2324099..2324101,2324228..2324230) /locus_tag="B565_2070" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(2324114..2324116,2324123..2324128,2324138..2324140, 2324150..2324152,2324216..2324218,2324222..2324233) /locus_tag="B565_2070" /note="active site" /db_xref="CDD:143635" misc_feature order(2324204..2324206,2324288..2324290) /locus_tag="B565_2070" /note="I-site; other site" /db_xref="CDD:143635" gene complement(2324495..2325193) /locus_tag="B565_2071" /db_xref="GeneID:10487988" CDS complement(2324495..2325193) /locus_tag="B565_2071" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392723.1" /db_xref="GI:330829771" /db_xref="GeneID:10487988" /translation="MSKALEMALRLFSPKGALHEPTSRNFSALGRDELIGALQIASKD NPQGLQYLMADHLIDKQAIEALQAHFNDGLCNADVGRMALAILLRRPLPEQLERLVLS HPYYDKERRRAAVVMEKAKRAHRHGNDHEYLRLLDERNAILNTAHGRCVDEMLISGRC PHCTGTGRRLRIGGECPKCHDTGRVAPDIALVSRRFGGEVQLSVESMVDEVIYQASDL TKAMERQVREMVME" misc_feature complement(2324507..2325193) /locus_tag="B565_2071" /note="uncharacterized phage protein; Region: phage_xxxx; TIGR02642" /db_xref="CDD:162959" gene complement(2325612..2325797) /locus_tag="B565_2072" /db_xref="GeneID:10487989" CDS complement(2325612..2325797) /locus_tag="B565_2072" /codon_start=1 /transl_table=11 /product="Gp74" /protein_id="YP_004392724.1" /db_xref="GI:330829772" /db_xref="GeneID:10487989" /translation="MALKGDDLIAVEACAACHDAIDGRFNYGWLPGEKEEVLYFALIR QLHQWVVRGLISVKGAT" misc_feature complement(2325633..>2325797) /locus_tag="B565_2072" /note="Protein of unknown function (DUF1364); Region: DUF1364; pfam07102" /db_xref="CDD:148610" gene complement(2325938..2326525) /locus_tag="B565_2073" /db_xref="GeneID:10487990" CDS complement(2325938..2326525) /locus_tag="B565_2073" /codon_start=1 /transl_table=11 /product="bacteriophage protein" /protein_id="YP_004392725.1" /db_xref="GI:330829773" /db_xref="GeneID:10487990" /translation="MELTLLKMSGGVLVPSTPADAEAIRSLPIGSFIQAKGSGRRNPA FHRRFFALLNLTFDYWEPAGGMVSPAEQGILNRFVRYLSHFGSSQALNQAKDEFIELL AINRVERHGPQAEKSFEVMRKWLTVEAGYFTIVILPDGGMRKEPKSIRFNKMEQAEFS DLYRAVFGVCWRYVLNQQFGSEAENTIAQLMGFSG" misc_feature complement(2325944..2326522) /locus_tag="B565_2073" /note="Protein of unknown function (DUF1367); Region: DUF1367; pfam07105" /db_xref="CDD:148613" gene complement(2326840..2327094) /locus_tag="B565_2074" /db_xref="GeneID:10487991" CDS complement(2326840..2327094) /locus_tag="B565_2074" /codon_start=1 /transl_table=11 /product="putative Gifsy-1 prophage protein" /protein_id="YP_004392726.1" /db_xref="GI:330829774" /db_xref="GeneID:10487991" /translation="MDYKLTANKGQKMLVTLDTKYNTYFNILPPGSTADAMFSGAMKG DRFEGELPMKGTYTIRVYQMGADKSSKAKHDFKLYVKISG" gene complement(2327473..2329113) /locus_tag="B565_2075" /db_xref="GeneID:10487992" CDS complement(2327473..2329113) /locus_tag="B565_2075" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004392727.1" /db_xref="GI:330829775" /db_xref="GeneID:10487992" /translation="MLKSMTIGNKLITVFSALVVLMLGFAWFSVTQLSNIYRDTTEIT NNVIPSIRASSQMHTALLDARRAELSMLIGIQDSDQSAISTNKQRFESSKRDFEAAQQ QYSKMDFVSERDKQYFENLVAAASDYFSAHSILLTAVEQGDVTKTKSLINNESKQALE KAGQDALSLRAENDRIAHEMAAHDKVVYDNAKTLSISMGAGTVVFVFLAALLLIRQIR NPIMVLLEQIHQVSAGNLTSKLDMKVFSHDELGMLAKGLNEMQDNLRMLVNEVLSSVV QLGSATEEISAVALQSAHNMDGQKHELNQLATAMNEMQATVQEVARNTNDAASAATQA STTALQGSNTVNNSIVRIEKVGESIEHTAVVIRQLGDDSRNIGMVLEVIQSIAEQTNL LALNAAIEAARAGEQGRGFAVVADEVRTLAKRTQDSTSQINGIISELQERANEAGATM QQSQTMMVETVTIAREAGASISEISSAVSSISHMNIQIATATEEQGAVSEELNRNVVN ISNASEEVAAGAKQMSQACHDLNHLATQLQDVVRKFRI" misc_feature complement(2328550..2329101) /locus_tag="B565_2075" /note="Four helix bundle sensory module for signal transduction; Region: 4HB_MCP_2; pfam12729" /db_xref="CDD:193205" misc_feature complement(2328319..>2328474) /locus_tag="B565_2075" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(2327479..2328264) /locus_tag="B565_2075" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(2327476..2328078) /locus_tag="B565_2075" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 2329777..2330130 /locus_tag="B565_2076" /db_xref="GeneID:10487993" CDS 2329777..2330130 /locus_tag="B565_2076" /codon_start=1 /transl_table=11 /product="putative signal peptide protein" /protein_id="YP_004392728.1" /db_xref="GI:330829776" /db_xref="GeneID:10487993" /translation="MYYKQEVFRKSDNGKFHDQRGYLIYDKKNQMIYNSYCIPRAVCV VVEGKAGNKVDFKTGKRGIAESSYMSANDSTTDFMMSLDFSVKDQLKYNQTTSLQVYG KPFAHSDSGTLIKIK" misc_feature <2329783..2330121 /locus_tag="B565_2076" /note="nitrobindin heme-binding domain; Region: nitrobindin; cl10502" /db_xref="CDD:195978" misc_feature order(2329795..2329797,2329822..2329827,2329888..2329890, 2329999..2330001,2330017..2330019,2330056..2330058, 2330062..2330064,2330068..2330070,2330098..2330103) /locus_tag="B565_2076" /note="heme-binding site [chemical binding]; other site" /db_xref="CDD:143652" gene 2331642..2332985 /locus_tag="B565_2077" /db_xref="GeneID:10487994" CDS 2331642..2332985 /locus_tag="B565_2077" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392729.1" /db_xref="GI:330829777" /db_xref="GeneID:10487994" /translation="MMSTNEQPIQIALLGASMDRVTQHITDWSLWDPAQQAVLLLNLP ADEQDQVLLAVRRDPDRYLHPVFCLEASPLSPILADGLLGQLDERVPHILERLSLLTL REHPDEMDKLAWYSWPRAHFRLLPHWQVGCRQGYSYPLLDCLLGSESIGSLPQLVSER LLQSEQLVDRVRLCNRCRSAHLNFVDVCPECSHIALEAKPAVHCFTCGHVDDQDSFMQ QSTLRCPKCVTTLRHIGVDYDRPLEKYRCLSCNARFIEATVLARCYECGQSSKPDDLV VTPIHEYRIGKLAHHIAREGSQRLHLPLAWGAPMAIEHFPWLLQWSNRLLQRHGGSHT LLAIQVEHLAEFRAELGLLKAFQRLAALLTRLQAQFRDTDVVCQYADDLLLLLLPYTD ADDREILQSRILAMNNIEGLDTLTLNVKMQPLPVSLGEDANLWLSHWLDGSIQHA" gene 2332963..2334318 /locus_tag="B565_2078" /db_xref="GeneID:10487995" CDS 2332963..2334318 /locus_tag="B565_2078" /codon_start=1 /transl_table=11 /product="family 2 glycosyl transferase" /protein_id="YP_004392730.1" /db_xref="GI:330829778" /db_xref="GeneID:10487995" /translation="MGASSMHDWLRTVYYILIDILGSLSVSPRMILLLLPMLLLVEVP LMALTLTGILKWYARQEPRVSDLPLSRRCPSVSCIITSYGEGNAIRSTILTLKEQLYR GHMEIIAVIDGANANAHTYQAALDCVREFQGCENRTLVLLPKWQRGGRVSTLNAGLSA ATGEIVMNADGDTSFDNNMIDEIVACFDDPNIPAVGGALRVRNLQAGLLTRMQGIEYM ISMQGGKTGLSEWNLINNISGAFGAFRRDFLRQIGGWDTHTAEDLDLTLRIKHYLKRH PSLKIGFAPKAIGHTDAPSDLVTLAKQRLRWDGDLLFLYLRKHKLSLTPRILGWKTFL FTLVYGVAQNVVLPLLVMGYTWWLIFSYPSQFVMALMLCLYLVYLFLTLINFLVFLLA ISERPRADLRLLPWLCLYPVYTLLMRLWCAVALLNEIFRRGHEESSMAPWWVLKRGNK F" misc_feature 2333122..2334315 /locus_tag="B565_2078" /note="N-glycosyltransferase; Provisional; Region: PRK11204" /db_xref="CDD:183038" misc_feature 2333197..2333748 /locus_tag="B565_2078" /note="CESA_like is the cellulose synthase superfamily; Region: CESA_like; cd06423" /db_xref="CDD:133045" misc_feature 2333470..2333478 /locus_tag="B565_2078" /note="DXD motif; other site" /db_xref="CDD:133045" gene 2334318..2335367 /locus_tag="B565_2079" /db_xref="GeneID:10487996" CDS 2334318..2335367 /locus_tag="B565_2079" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392731.1" /db_xref="GI:330829779" /db_xref="GeneID:10487996" /translation="MKVTFTPPKKQDATSEQGIRVLYAPAKRMAFKVRWYLILILAFS PVIILLWYLGREWWLTQAPAIITTEPQLVVANGDGFIRNIYMTPGQPVSQGDVLMQFE SPTLNVNIEARKARLKAIVLNKQLDELEILRILDGQISIAERGSREQEAIYKEYANYR QQKLVSSAEYASVLLSWTQSLIALQKAKVDKTQHILQVKEDHLTGPLASARHSLEQEL TEMETMAMQQQPVAPTRGKVSDVLVQAGDWVFSGAPLALISKREDPLVLAYVQPKYLS SMETGHRAIVKLPSGERLAARVARPVELADKLPAQLAAPFEGEKATLKVALSLDDKLP LSLQVEGLPVTVLFD" misc_feature 2334390..2335214 /locus_tag="B565_2079" /note="Multidrug resistance efflux pump [Defense mechanisms]; Region: EmrA; COG1566" /db_xref="CDD:31754" misc_feature <2334963..2335091 /locus_tag="B565_2079" /note="Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2...; Region: Biotinyl_lipoyl_domains; cl11404" /db_xref="CDD:197439" misc_feature 2334990..2334992 /locus_tag="B565_2079" /note="lipoyl-biotinyl attachment site [posttranslational modification]; other site" /db_xref="CDD:133456" gene complement(2335927..2336967) /locus_tag="B565_2080" /db_xref="GeneID:10487997" CDS complement(2335927..2336967) /locus_tag="B565_2080" /codon_start=1 /transl_table=11 /product="transposase IS116/IS110/IS902 family protein" /protein_id="YP_004392732.1" /db_xref="GI:330829780" /db_xref="GeneID:10487997" /translation="MNITTIGIDLAKSCIQVHCIDVHGKRILNKKLKREQVVPFFSNR PACLIGMEACGSAHFWANKLQALGHTVKLMAPQFVKPYVKTNKNDAADAEAICEAVSR PNMRFVPIKNSEQLAVLAMHRARQGFVKARTAQANQLRGLLAEHGIIIPKGIRHINQH LPDILEAGDNGLPGRFRQLLDRLSAHFKELDKQVRELDVQLQSWHQDSPASQKLAKIP GIGPLTASALVATIGDAKQFQNGRQLAAWLGLVPRQHSSGGKPTLLGISKRGDTYLRT LLIHGARAVLRVVKSKAQHAGSWLEGVMARRNHNVAAVAQANKTARIVWALLANDREF DAQYSTGTILAA" misc_feature complement(2335984..2336958) /locus_tag="B565_2080" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG3547" /db_xref="CDD:33349" misc_feature complement(2336503..2336778) /locus_tag="B565_2080" /note="Transposase; Region: DEDD_Tnp_IS110; pfam01548" /db_xref="CDD:190030" misc_feature complement(2336107..2336328) /locus_tag="B565_2080" /note="Transposase IS116/IS110/IS902 family; Region: Transposase_20; pfam02371" /db_xref="CDD:190292" gene complement(2336982..2337554) /locus_tag="B565_2081" /db_xref="GeneID:10487998" CDS complement(2336982..2337554) /locus_tag="B565_2081" /codon_start=1 /transl_table=11 /product="putative transposase" /protein_id="YP_004392733.1" /db_xref="GI:330829781" /db_xref="GeneID:10487998" /translation="MFGEGEWKVRKHGAEKRRVWRKLHLAVDPVAHDIVAAEVSLENV HDAEVLPTLLNPLRRKLGCVYADGAYDSKASHQLISRKGATACIPPRKNAGLWKKAHP RNEAVLVMRKEGLAYWKKISGYHRRSLAETAMYRFKQLLAGKISLRNYNGQVGEVMAY VSAINKLMEWSPLPKMASNVPKWRMKLPTD" misc_feature complement(2337051..2337527) /locus_tag="B565_2081" /note="Transposase DDE domain; Region: DDE_Tnp_1; pfam01609" /db_xref="CDD:144990" gene complement(2337544..2337933) /locus_tag="B565_2082" /db_xref="GeneID:10487999" CDS complement(2337544..2337933) /locus_tag="B565_2082" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="YP_004392734.1" /db_xref="GI:330829782" /db_xref="GeneID:10487999" /translation="MGTPLQPITNWPTYNKSLINRGSLTFWVDAEAMSNWFHHDHHGR RGRSQLYTDQSICTFLMLKGIFNLSLWATQGLFDSLLELMNVPLCAPDYSCVSKRART VKVAYRQPPQGAHYRPSYRLDGSESVW" gene 2338285..2339343 /locus_tag="B565_2083" /db_xref="GeneID:10488000" CDS 2338285..2339343 /locus_tag="B565_2083" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="YP_004392735.1" /db_xref="GI:330829783" /db_xref="GeneID:10488000" /translation="MSSKLPFLDLARGLAAIFMVCTHVVSINTKTQIAEHSIFGRVIT LLGEAPAAPVFMVVMGILYAYKKEHQFTHDIKRSFSLFAKGYYLNLLRLAVPFTLFLF YMPFDTSEPDDKLTNFADDIISNLLVVDILQVAGLSYLIMAIVNKLQLNDVCITLLIL LVLVYSPFIWGLGTYVPFWGRLLEPLWGINGEMVSFPLFPWVIYPLIGMILGRRYSNP LTLTTQAMGYQFGFGVLLSFIGILISKTNISFHFGDYWRTGPGGLILYIGFIMQWLAL MFFASPYLHKGFLNIISFISTHITNFYIVQWVIISASIVVLDQYKLDITESLVAIIII IAMSFLICKKLQKHNVNL" gene 2339357..2340586 /locus_tag="B565_2084" /db_xref="GeneID:10488001" CDS 2339357..2340586 /locus_tag="B565_2084" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392736.1" /db_xref="GI:330829784" /db_xref="GeneID:10488001" /translation="MKIFIYMLGLVLSSGVFAKDNRDGIAYSIISLNQKIIDFDNSLN LDNSIREQGVDFLYDSLSLASEVFIEKASIGSPSFVDWITTSRKTAGDNPWTRYRSTM IKGESSYVLEGKIGDTLYLGIQVYTLRDGKNVALPEKNVSTDNIKVGDNGTFRIEIGP RAAANGITTDANDYMLIVREYYANGAVRKNAPAELMIKQTDGDFDTPFIASSSDRITR ASAFLTSLVESSLDLTSQMSKSKNTSAEVNPRPDLVQALFPTTDNRYDGFYIQLENDK AIKLTGKIPANLKYASITYYNPYYATVDYEKHKTYITKDELELNADGSYEVYITKFDI KDKKNLITTQGYNEGVISIRYLGKEELDFETKVIDVNDIPNKDIKKDDRNGGGGSVPA ELLLLGAIYMARKSLAS" gene complement(2340629..2340772) /locus_tag="B565_2085" /db_xref="GeneID:10488002" CDS complement(2340629..2340772) /locus_tag="B565_2085" /codon_start=1 /transl_table=11 /product="putative short-chain dehydrogenase" /protein_id="YP_004392737.1" /db_xref="GI:330829785" /db_xref="GeneID:10488002" /translation="MYPKVYIEFYGVDEGKANDGFAEDYDAVVSVEKVISFTTEIPYT CQY" gene complement(2341444..2342606) /locus_tag="B565_p006" /note="transposase" /pseudo /db_xref="GeneID:10488003" gene complement(2342662..2343684) /locus_tag="B565_2086" /db_xref="GeneID:10489951" CDS complement(2342662..2343684) /locus_tag="B565_2086" /codon_start=1 /transl_table=11 /product="phage integrase family protein" /protein_id="YP_004392738.1" /db_xref="GI:330829786" /db_xref="GeneID:10489951" /translation="MPLTDTKLRALYGKPYFGKTELSDRDGLSARVTERGTISWQYRY RWQGKAARLKIGRYPDLKLADARALIPAIRGALERNEHPRVFWDKLHQKHDVTLKQCC EHFREHHLPKLRPRTVMLYEHTMQRYFEPLFIGIPVEQIPFSSWLEWFDKIGKKKPKN AGHLLRRLKSILSFCIRRNLIGGSPVLQLRTEDVGSQPERGTRVLTMRELAQIWIAFE QSRASRGLKLAAKLVILLGCRSGEALGAQWSEFNMEEQIWTVPAARAKCGAPIRRPIP SRVMMLLQEAAARDRLKGGPVCRSPVNPKRSLSSASLIQLAERVRDKLDLPYWRMHDM RRTVVV" misc_feature complement(2342674..2343600) /locus_tag="B565_2086" /note="DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine recombinases that share the same fold in their catalytic domain containing six conserved active site...; Region: DNA_BRE_C; cl00213" /db_xref="CDD:193712" misc_feature complement(order(2342680..2342682,2342689..2342691, 2342887..2342889,2342968..2342970)) /locus_tag="B565_2086" /note="Int/Topo IB signature motif; other site" /db_xref="CDD:29495" misc_feature complement(order(2342680..2342682,2342689..2342691, 2342968..2342970)) /locus_tag="B565_2086" /note="active site" /db_xref="CDD:29495" misc_feature complement(order(2342689..2342697,2342887..2342889, 2342965..2342970)) /locus_tag="B565_2086" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29495" gene 2343873..2345288 /locus_tag="B565_2087" /db_xref="GeneID:10488004" CDS 2343873..2345288 /locus_tag="B565_2087" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease I" /protein_id="YP_004392739.1" /db_xref="GI:330829787" /db_xref="GeneID:10488004" /translation="MNQQTNPTFYFHDYETFGISPAKDRPSQFAGIRTDADFNIIGEP LVIYCKPPADYLPDPEACLITGITPQKAMKDGLCEADFIRQIHEQFATPNTCVLGYNS IRFDDEVTRYTLYRNFYDPYAYSWQNGNSRWDILDMLRACYALRPEGIEWAFDDEGKP SFRLEKLTVGNGVAHANAHDALSDVLATIEMAKLVKKAQPKLFGYLFDLRNKNKVKAL IDVVTMKPLVHVSGMFSPWQGCASWVSPLAWHPTNQNAVIMVDLTRDPTPLIELTSEE IRERLYTKKEELGDLAGIPVKLVHINKCPVLAPAATLTAERADELGINREQCRKSLDL LRAHPEVREKLVEVFNQEFAGSNESDPDTQLYAGFFGHGDKSTMDLVRATPADLLGER EFAFTDSRLPEMLFRYRARNWPHTLSEAEQKRWRLHCSDYFSRRLPDYVPRLEALAEQ NQSNERNFAILKSLYHYLEDL" misc_feature 2343876..2345285 /locus_tag="B565_2087" /note="exonuclease I; Provisional; Region: sbcB; PRK11779" /db_xref="CDD:183310" misc_feature 2343900..2344451 /locus_tag="B565_2087" /note="N-terminal DEDDh 3'-5' exonuclease domain of Escherichia coli exonuclease I and similar proteins; Region: ExoI_N; cd06138" /db_xref="CDD:99841" misc_feature order(2343909..2343920,2343924..2343929,2344062..2344067, 2344170..2344175,2344182..2344190,2344407..2344409, 2344422..2344424) /locus_tag="B565_2087" /note="active site" /db_xref="CDD:99841" misc_feature order(2343909..2343920,2343924..2343926,2344170..2344175, 2344182..2344187,2344407..2344409,2344422..2344424) /locus_tag="B565_2087" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:99841" misc_feature order(2343909..2343911,2343915..2343917,2344188..2344190, 2344407..2344409,2344422..2344424) /locus_tag="B565_2087" /note="catalytic site [active]" /db_xref="CDD:99841" misc_feature 2344500..2345285 /locus_tag="B565_2087" /note="Exonuclease C-terminal; Region: Exonuc_X-T_C; pfam08411" /db_xref="CDD:149465" gene 2345444..2345944 /locus_tag="B565_2088" /db_xref="GeneID:10488005" CDS 2345444..2345944 /locus_tag="B565_2088" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392740.1" /db_xref="GI:330829788" /db_xref="GeneID:10488005" /translation="MPRHHALLGLLTLLPLAANAAYRFDVPDYLARLPEQTYRIVEQN FNTLYQQTDFTPLITNSYFNGSHLYKFVGVPLAISAQSGFQLEVFGQVYNRASQAYMH LSEDMSLYRVMRVDLMGNPNDQLAIGFGLGVPITPLLTLKAIASGSDIPGYGSAKYAV GFEWRY" gene complement(2346023..2347732) /locus_tag="B565_2089" /db_xref="GeneID:10488006" CDS complement(2346023..2347732) /locus_tag="B565_2089" /codon_start=1 /transl_table=11 /product="alpha-galactosidase" /protein_id="YP_004392741.1" /db_xref="GI:330829789" /db_xref="GeneID:10488006" /translation="MTSLLSRVRQLANDNALPPHLLQTRQWEGPLCRVRLDNTGSDAT PVERWVLFDGKLGLPVESAIYGEGFQMLAQTMGSWQSPQHVGRCPDASVYRITDDNGY HTIHNLLLVEHGKGWLLLAFASCHRFGGEFRLYPDGRLQILMNCEGRKLAAGEHWQSE ALICLEGAEREDLLAELARLIEVEHGSLIGKVSERPSGWCSWYHYYAEVSAADIRENL QVRAERFPALRYVQIDDGYQAKMGDWLTPSAKFEQGVASLAAEIKQAGCEPALWVAPF IAEPGSQVFQDHPDWFVKGDDGLPLPSERVTYGGWRCTPWYVLDGTHPEVQAHLEQVF RTLREQWGIHYFKLDANFWGAIHGGRFHDPAATRVEAYRRGMAAILRGAGEGAFLLGC NAPIWPSLGLVHGMRVSDDVERNGHRYRQIAREAFCRAWQNDKLWALDPDCICLRDLP TQQASQAEYSFHLAALVASGGMMLAGDRLQDLDEGQAAQLRKLLELCAARAPSARFES MDFACGEVSLPEGGTLLCLFNGEGQPQEFLLPEGGTDCWQGQAVGTTVTLQGGEGRVI HYT" misc_feature complement(2346347..2347636) /locus_tag="B565_2089" /note="Alpha-galactosidase [Carbohydrate transport and metabolism]; Region: GalA; COG3345" /db_xref="CDD:33154" misc_feature complement(<2346683..2347138) /locus_tag="B565_2089" /note="The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-...; Region: GH31; cl11402" /db_xref="CDD:196216" misc_feature complement(2346686..2346688) /locus_tag="B565_2089" /note="catalytic site [active]" /db_xref="CDD:133121" gene 2347932..2348249 /locus_tag="B565_2090" /db_xref="GeneID:10488007" CDS 2347932..2348249 /locus_tag="B565_2090" /codon_start=1 /transl_table=11 /product="LrgA family protein" /protein_id="YP_004392742.1" /db_xref="GI:330829790" /db_xref="GeneID:10488007" /translation="MVIVACLLAGKSVAAILPFAFPGSIIGMLLLFVLLSLQLIKLHW VELGAGLLLRHMGVLFVPVAVGLVAWLEPLRQSFGVIMLCIVLGIVLILATVGRLYQR MNK" misc_feature 2347935..2348246 /locus_tag="B565_2090" /note="LrgA family; Region: LrgA; cl00608" /db_xref="CDD:186103" gene 2348246..2348932 /locus_tag="B565_2091" /db_xref="GeneID:10488008" CDS 2348246..2348932 /locus_tag="B565_2091" /codon_start=1 /transl_table=11 /product="LrgB family protein" /protein_id="YP_004392743.1" /db_xref="GI:330829791" /db_xref="GeneID:10488008" /translation="MIFWLAIPLTLALYFATRALYRRLPWPIINPVLVPTAVIIGLLL WLDLPLEQYERGSSPITMLLEPAVVALALPLYQQARQIQAKLKPILICTLASVLISVC TTLLIGHFMGTDPALLASLATKSITTPLAMSVSQSIGGIPAIAAAVVVVVGIVGALIG YPLLRLLKVTDPEAQGLAMGACAHAIGTATSAEKGITQGAFASLAMVVCGILTAAVAP LLFAIYHWLI" misc_feature 2348273..2348914 /locus_tag="B565_2091" /note="LrgB-like family; Region: LrgB; cl00596" /db_xref="CDD:186096" gene 2349130..2350014 /locus_tag="B565_2092" /db_xref="GeneID:10488009" CDS 2349130..2350014 /locus_tag="B565_2092" /codon_start=1 /transl_table=11 /product="Cytidine deaminase" /protein_id="YP_004392744.1" /db_xref="GI:330829792" /db_xref="GeneID:10488009" /translation="MHPRFAKPFDTLSAPLKAAVQPMLDSADFNARFTPEQVATLKAA TGLDDRALRLALLPLAAACSVAPISKFYVGAIACGLSGTWYFGANMEFAGQGLFHSVH AEQSAISNAWLGGETGISEITVNYTPCGHCRQFMNELSTAKILKVSLPDDLSALQSFL PHSFGPADLDITDALMSPQDHAELELQSEDPLWQAALAAARQSYAPYSQGYAAVALQF ADGRIFSGRYAENAAFNPSLPPMQMACAHAVLNGEDLATIRRAVLLENKNGQISQRDS AQSTLKALGSVELEYQAV" misc_feature 2349130..2350011 /locus_tag="B565_2092" /note="cytidine deaminase; Provisional; Region: PRK09027" /db_xref="CDD:181614" misc_feature 2349325..2349585 /locus_tag="B565_2092" /note="Cytidine deaminase zinc-binding domain. These enzymes are Zn dependent. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a water molecule to form a hydroxide ion that performs a nucleophilic attack on...; Region: cytidine_deaminase; cd01283" /db_xref="CDD:29826" misc_feature order(2349340..2349342,2349346..2349348,2349394..2349396, 2349400..2349402,2349433..2349441,2349514..2349516, 2349523..2349525) /locus_tag="B565_2092" /note="active site" /db_xref="CDD:29826" misc_feature order(2349433..2349441,2349511..2349516,2349523..2349525) /locus_tag="B565_2092" /note="catalytic motif [active]" /db_xref="CDD:29826" misc_feature order(2349433..2349435,2349439..2349441,2349514..2349516, 2349523..2349525) /locus_tag="B565_2092" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:29826" misc_feature 2349595..2349969 /locus_tag="B565_2092" /note="Cytidine and deoxycytidylate deaminase zinc-binding region. The family contains cytidine deaminases, nucleoside deaminases, deoxycytidylate deaminases and riboflavin deaminases. Also included are the apoBec family of mRNA editing enzymes. All members...; Region: cytidine_deaminase-like; cl00269" /db_xref="CDD:185875" gene complement(2350149..2351534) /locus_tag="B565_2093" /db_xref="GeneID:10488010" CDS complement(2350149..2351534) /locus_tag="B565_2093" /codon_start=1 /transl_table=11 /product="Tryptophan deaminase, PLP-dependent" /protein_id="YP_004392745.1" /db_xref="GI:330829793" /db_xref="GeneID:10488010" /translation="MRRIPEPFRIKMVEPIKQTTGAERRAALEAAGWNPFLLLAEDVY IDLLTDSGTGAMSDRQWAGIMMGDEAYAGSRNFVELERTVRDIFGYQHVMPTHQGRGA EQILFPELVKRCKGKAPVFISNYHFDTTKAHVELAGARAINLLTPKALDTTAPYAWKG DFDLPRLTDTIETLGADNVAGIIITVTCNSAGGQPVSMANMEAVSELARRHHIPVVID AARFAENAWFIKERDPAYAKHSIKEIVRQMFALGDIFTMSAKKDGLVNIGGLCCFKED LDLFRAVQVRCVAMEGFVTYGGLAGRDMAALAIGLREGMDEEYLTYRISQVAYLGERL AEAGIPIQTPTGGHAVFVDAKKLLPHIPAEQFPAHALACELYLEGGVRGVEIGSLLLG RDPATGKQEAADFELLRLTIPRRVYTRDHMDYVADCLIAVKARASGIRGLTFDYEPPL LRHFTARLKPV" misc_feature complement(2350152..2351534) /locus_tag="B565_2093" /note="tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional; Region: tnaA; PRK13238" /db_xref="CDD:183910" misc_feature complement(2350161..2351438) /locus_tag="B565_2093" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl00321" /db_xref="CDD:193768" misc_feature complement(order(2350752..2350754,2350761..2350763, 2350872..2350874,2350881..2350883,2350980..2350982, 2351226..2351228,2351235..2351240)) /locus_tag="B565_2093" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99742" misc_feature complement(2350752..2350754) /locus_tag="B565_2093" /note="catalytic residue [active]" /db_xref="CDD:99742" gene 2351994..2352158 /locus_tag="B565_2094" /db_xref="GeneID:10488011" CDS 2351994..2352158 /locus_tag="B565_2094" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392746.1" /db_xref="GI:330829794" /db_xref="GeneID:10488011" /translation="MHRKPHLPEKICPVCQRPFSWRRKWARSWEEIRYCSERCRHARH SSQQPEGERV" misc_feature 2351997..2352122 /locus_tag="B565_2094" /note="Uncharacterized protein conserved in bacteria (DUF2256); Region: DUF2256; cl01792" /db_xref="CDD:154592" gene 2352158..2353678 /locus_tag="B565_2095" /db_xref="GeneID:10488012" CDS 2352158..2353678 /locus_tag="B565_2095" /codon_start=1 /transl_table=11 /product="Cryptochrome/photolyase" /protein_id="YP_004392747.1" /db_xref="GI:330829795" /db_xref="GeneID:10488012" /translation="MELRLILGDQLNAGHSWFRTPDPVVCYLMAELRQETDYCHHHRQ KVLAFFAAMRAFAAALTQAGHRVCYLTLDESARWPDLPGLLEAQLEAHQASSFAWQSP DEWRLASQLKSWAAGLAIPATEVESEHFLTPRDGWQRYPHSRMEFFYRALRKQYQVLL DERGQPLGGRWNFDDENRAKLPASQPIPEPLTFANEVSEIDAMLTRHGVSTIGEADAS KLPWPITRRQSRELLAHFLAHCLPHFGRYQDALSERGWSLFHSRLSFSLNSKMLHPLE VIRAAETHWQANQATITLAQVEGFIRQILGWREFVRALYWEKMPDYKQSNFLEAKRPL PGFFWNGETRMACVRHAIGQSLEHGYAHHIQRLMVTGNFALLAGIDPDEVDQWYLGIY VDAIEWVELPNTRGMSQFADGGLMGSKPYASSGAYLERMGHYCKGCHYQVKARHGDGS CPFNSLYWHFLWRNRDKLGGNPRLALPYANWDGQAAAQQQAILATAEHYLIHLELL" misc_feature 2352158..2353675 /locus_tag="B565_2095" /note="Uncharacterized protein related to deoxyribodipyrimidine photolyase [General function prediction only]; Region: COG3046" /db_xref="CDD:32860" misc_feature 2352164..2352805 /locus_tag="B565_2095" /note="Deoxyribodipyrimidine photo-lyase-related protein; Region: DPRP; pfam04244" /db_xref="CDD:146730" misc_feature 2352833..>2353162 /locus_tag="B565_2095" /note="FAD binding domain of DNA photolyase; Region: FAD_binding_7; pfam03441" /db_xref="CDD:146197" gene 2353902..2355167 /locus_tag="B565_2096" /db_xref="GeneID:10488013" CDS 2353902..2355167 /locus_tag="B565_2096" /codon_start=1 /transl_table=11 /product="D-amino acid dehydrogenase small subunit" /protein_id="YP_004392748.1" /db_xref="GI:330829796" /db_xref="GeneID:10488013" /translation="MEIVVLGGGVIGVTSAWYLAKAGHKVTLLERQGGVALETSHANA GQISPGYAAPWAAPGIPLKAAKWMLQKHAPFTVRPTADPFQLRWMLKMLANCTPTAYA TNKGRMVRLAEYSRDCMKLLRDELSIDYEGRQLGTLQLFRSQSQLDASQRDIEVLEEY GVPYQSLDASGCEAAEPALARVRGKIVGGLRLPGDETGDCFRFTKALALEAEKLGVKF IFNCDIDEIEQARGRAVAVRASDQRYRADAIVCALGSYATGFLRPLLRPLGLELPVYP VKGYSLTLPMINAEAAPRSTVLDETYKVAITRFDERIRVGGMAELSGYNLALNPRRHD TLAMVVGDLFPEGGDISQAEFWTGLRPMTPDGTPLVGPSPIPGLWLNTGHGTLGWTMA AGSGQLLCDLINGSEPAISDEGLTLARYG" misc_feature 2353941..2355161 /locus_tag="B565_2096" /note="Malate:quinone oxidoreductase (Mqo); Region: Mqo; cl14881" /db_xref="CDD:196842" misc_feature 2353941..2355128 /locus_tag="B565_2096" /note="D-amino acid dehydrogenase small subunit; Provisional; Region: PRK12409" /db_xref="CDD:183509" gene complement(2355241..2355411) /locus_tag="B565_2097" /db_xref="GeneID:10488014" CDS complement(2355241..2355411) /locus_tag="B565_2097" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392749.1" /db_xref="GI:330829797" /db_xref="GeneID:10488014" /translation="MRLSTLRIVAACASRIAQYSVPFAALTGSQSTAKADGQGEGQHQ TKRPPFMAVACQ" gene 2355529..2356641 /locus_tag="B565_2098" /db_xref="GeneID:10488015" CDS 2355529..2356641 /locus_tag="B565_2098" /codon_start=1 /transl_table=11 /product="aspartate-semialdehyde dehydrogenase Asd" /protein_id="YP_004392750.1" /db_xref="GI:330829798" /db_xref="GeneID:10488015" /translation="MKKVGLVGWRGMVGSVLMSRMQEEQDFAHIQPTFFTTSQAGEAA PNFGVDAGTLQDAFDIEALAKQDIIITAQGGDYTKDVYPRLKAAGWQGYWIDAASSLR MEKDAVIILDPVNGDVIEQALNDGIKTFVGGNCTVSLMLLALGGLFKADLVEWVSVAT YQAASGGGARHMRELVTQMGMLRDEVAVELADPASAILDIERKITEKTRSGTLPVDNF GVPLAGGLIPWIDTKLDNGQSREEWKGQAETNKILGIENAVIPVDGLCVRIGALRCHS QAFTIKLKKDVPLAEIEALLAAHNDWVKVIPNDRDITARELTPAAVTGTLSIPVGRLR KLNMGPEYLAAFTVGDQLLWGAAEPLRRMLRILLAR" misc_feature 2355529..2356635 /locus_tag="B565_2098" /note="aspartate-semialdehyde dehydrogenase; Reviewed; Region: PRK06598" /db_xref="CDD:180636" misc_feature 2355535..2355891 /locus_tag="B565_2098" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 2355958..2356590 /locus_tag="B565_2098" /note="Semialdehyde dehydrogenase, dimerisation domain; Region: Semialdhyde_dhC; pfam02774" /db_xref="CDD:145758" gene complement(2356743..2357603) /locus_tag="B565_2099" /db_xref="GeneID:10488016" CDS complement(2356743..2357603) /locus_tag="B565_2099" /codon_start=1 /transl_table=11 /product="formate dehydrogenase family accessory protein FdhD" /protein_id="YP_004392751.1" /db_xref="GI:330829799" /db_xref="GeneID:10488016" /translation="MRELLELEARDELSEQSEQNELARCAIHREVVHYRADALTCDSE MALPSETPVALVYNGIAHSVMMCSASDLEDFAIGFSLSEGIIDSLLDIHDIEQIDGCQ GIELHLTLANRCVHRLKEKRRTMAGRTGCGICGSESLEQVIRTQPSLPDSQRLAVGHI DKVLSALRPLQLLGQRTGATHAAVHLDGEGNILAIREDVGRHIALDKLVGHLCRTGRR DGAILVTSRASFEMVQKCASAGVEILLAISAATELAVERAEQTGLTLVGFCRPGRAEI YSGCQRILLK" misc_feature complement(2356758..2357534) /locus_tag="B565_2099" /note="FdhD/NarQ family; Region: FdhD-NarQ; cl00659" /db_xref="CDD:186130" gene complement(2357600..2359732) /locus_tag="B565_2100" /db_xref="GeneID:10488017" CDS complement(2357600..2359732) /locus_tag="B565_2100" /codon_start=1 /transl_table=11 /product="formate hydrogenlyase transcriptional activator" /protein_id="YP_004392752.1" /db_xref="GI:330829800" /db_xref="GeneID:10488017" /translation="MLNVSAIPLDEISPIWDDGFLLLSKSLLSAVTLDDFIHKLNKID AGFGGVTRVNLILNMGADEEAIFYFMGHSGPKHLVCPKAELHLSPRPTKETPEQAIIL AAARFENRCPALDREGVYDGLRSYCQLPITTARSHLGGVEFINTQLDSFTMETLAKLT QLAAIIAIALENVLDKERTLEQANSLRLERDSCKILVDVTNAVIKLVRIAELPKSLFT ILHHHFGISSLCLAEYNATSDSFKSYLVNQHQSDQPGIIDHSCFEKKCLQGALGHSEP FFVYREHGHGCSNRCRFTSQILPPEADSSCILPLRYRGNLLGVLILSHPNADFFADID ISLLEQVAARTAIAMNNVQAQQEISNTNGAKEKTIRINEPQMQGEFPHIIYQSAVMES VLEKVRLVAESDSTVLILGETGTGKELIAQAIHALSARHDHEMVKVNCAAIPTGLIES DLFGHEKGAFTGALTQRIGRFERAHKGTLFLDEVGDMPLDLQPKLLRVLQEHELERVG NSNPIAVDVRLVAATNCDLLSMVKNKRFRSDLYYRLNVFPIELPPLRERREDIPLLVN FFIKKIAKRMRRTITSIPADAMKMLVSLPWYGNIRELENVIERAVVMTRGHVLNLSPD ELMPLKGYHKIETLVYDEPATPLFAEEGPIDEREAIIAALRDCNGIVAGERGAANRLG MKRTTLLSKMKRLGISARDPEIIDGVAP" misc_feature complement(2357633..2359414) /locus_tag="B565_2100" /note="formate hydrogenlyase transcriptional activator FhlA; Provisional; Region: PRK15429" /db_xref="CDD:185327" misc_feature complement(2358686..>2358823) /locus_tag="B565_2100" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" misc_feature complement(2358074..2358565) /locus_tag="B565_2100" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(2358479..2358502) /locus_tag="B565_2100" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(2358161..2358163,2358287..2358289, 2358476..2358499)) /locus_tag="B565_2100" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(2358284..2358301) /locus_tag="B565_2100" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(2358104..2358106) /locus_tag="B565_2100" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature complement(2357648..2357767) /locus_tag="B565_2100" /note="Bacterial regulatory protein, Fis family; Region: HTH_8; cl01091" /db_xref="CDD:186327" gene complement(2360161..2360559) /locus_tag="B565_2101" /db_xref="GeneID:10488018" CDS complement(2360161..2360559) /locus_tag="B565_2101" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392753.1" /db_xref="GI:330829801" /db_xref="GeneID:10488018" /translation="MQHEIGRLFGLFYIGTYLAAILLGIGCYIWRDEMIFLLGFGFFG CFMAARLAMSSVFSALSISSAWLIGFISTTLINGLLLGVITLLVYLTHQSVTAELADN ASWLLMAFQSLSALFIFGGLKCCHSRIITS" gene complement(2360656..2362800) /locus_tag="B565_p007" /note="Formate dehydrogenase" /pseudo /db_xref="GeneID:10488019" gene complement(2362847..2363446) /locus_tag="B565_2102" /db_xref="GeneID:10489952" CDS complement(2362847..2363446) /locus_tag="B565_2102" /codon_start=1 /transl_table=11 /product="Electron transport protein" /protein_id="YP_004392754.1" /db_xref="GI:330829802" /db_xref="GeneID:10489952" /translation="MNSFVIADPSLCIGCRTCEVACAVSHQSGSCSGTLEREGGLHLA IEDGHLVSRDSYFQPRLKVIVGSKVTTPVLCRQCEDKPCAMACPNNAIVSEDGCVKVL QERCIGCKSCVVACPYGAMAVVLKEVPPAADSLFKRPQTKAQALKCDLCRHREAGPAC VEVCPTQALRLVTPEHLENLNRQKQLASAEALLAMPARV" misc_feature complement(<2362880..2363446) /locus_tag="B565_2102" /note="putative oxidoreductase Fe-S binding subunit; Reviewed; Region: PRK12769" /db_xref="CDD:183733" misc_feature complement(2363066..>2363221) /locus_tag="B565_2102" /note="RPB11 and RPB3 subunits of RNA polymerase; Region: RNAP_RPB11_RPB3; cl11409" /db_xref="CDD:196219" gene 2364128..2365342 /locus_tag="B565_2103" /db_xref="GeneID:10488020" CDS 2364128..2365342 /locus_tag="B565_2103" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392755.1" /db_xref="GI:330829803" /db_xref="GeneID:10488020" /translation="MHPNILYYVTRQDESISKTGVSTYVPTLGHPASAIDIYRTVAIH SIENKPASWCFTDLEAASALGRIIDGPIISGSDIEFAESALRSLLLHEYTEILVPCVK VSYPDGHTQYLRLDNKIRNEASFTAFQVSNTFDRLLATEWVTVSNGKFVESSNTRSTL INTDIDLFSKQYPSMLKTIGELAHAFPNQLGAATCFTNQQLLDSMHGSAAGFIDEMYN RVRRPWFDFAQSVPSLYLDLKLPPLLAIVLSRAPWREKIPEVLNDLREELNQLRSELN RLNKMIDTCMPQAEIISQTQKVNESFDAIVPESLLTTAELRLRRVVSIFNFIRPIQQL YSIAADPLSAEPDKFFELVQSAKNVVAKDSRIVSRSIPAAKMAELLKVGNIRESILTH FTEQEVKLIARG" gene 2365460..2365882 /locus_tag="B565_2104" /db_xref="GeneID:10488021" CDS 2365460..2365882 /locus_tag="B565_2104" /codon_start=1 /transl_table=11 /product="GNAT family acetyltransferase" /protein_id="YP_004392756.1" /db_xref="GI:330829804" /db_xref="GeneID:10488021" /translation="MNIKIHNEHKDDILNVLVDNLRQFNFDKMGEERSQPLIVAIHDD NDEVVGGIAGRTIYHQLLIEVLWVHNDKRGQGLGIQLMEIAEREAKKRGCIAAQVDTL SFQAPKFYEKMGFEIVGKVSGVKNSPDRYFLLKHYHGK" misc_feature 2365460..2365816 /locus_tag="B565_2104" /note="Acetyltransferases [General function prediction only]; Region: RimI; COG0456" /db_xref="CDD:30804" misc_feature 2365586..2365741 /locus_tag="B565_2104" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cd04301" /db_xref="CDD:173926" misc_feature order(2365655..2365663,2365691..2365696) /locus_tag="B565_2104" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene 2366413..2368281 /locus_tag="B565_2105" /db_xref="GeneID:10488022" CDS 2366413..2368281 /locus_tag="B565_2105" /codon_start=1 /transl_table=11 /product="putative potassium transport system protein kup 2" /protein_id="YP_004392757.1" /db_xref="GI:330829805" /db_xref="GeneID:10488022" /translation="MNCDKQQATPGVMLAAIGVVYGDIGTSPLYTLRECLSGQFGFGV EPASILGFLSLIFWLLILVVSVKYLSFVMRADNAGEGGILTLMSLATRNASTRWTPLL IILGLIGGSFFYGEVVITPAMSVMSAIEGLSILTPALDPYIVTLSVLVLTLLFAIQKH GTAMVGKLFAPIMLIWFMTLAVLGLRGIIHNPEVLGALNPIWAVRFFVQYQTTSFFAL GAVVLAITGVEALYADMGHFGKNPIRLAWFIVVLPSLVLNYFGQGALLLSNPAAIANP FFLLAPKWALVPLLLLATMATVIASQAVISGVFSLTRQAVRLGYLSPIRIVHTSEQES GQIYIPVINWMLYISVVIVIMSFEHSSNLAAAYGIAVTGTMVLTSILSCSVAKNSWHW NKYLVAILFAALLCIDVPLFAANLAKIFSGGWLPLTLGAVMFTVMTSWKSERFQLIRR LNEHGNSLEPMIASLEKSPPTRVAGTAVYMSRVVNVIPHALLHNLKHNKVLHERIILL TLRVEDVPYVHNVRRVCIEQLSPTFWRVVASYGWRETPNVEEIFHRCNAEGLSCRMME TSFFMAHESLIMKDRPWYLYLRGKLFMLLQRNALRAPDQFEIPPNRVIELGSQVDI" misc_feature 2366413..2368278 /locus_tag="B565_2105" /note="K+ potassium transporter; Region: K_trans; cl01227" /db_xref="CDD:194073" misc_feature 2366452..2368278 /locus_tag="B565_2105" /note="potassium uptake protein; Region: kup; TIGR00794" /db_xref="CDD:129876" gene complement(2368505..2369698) /locus_tag="B565_2106" /db_xref="GeneID:10488023" CDS complement(2368505..2369698) /locus_tag="B565_2106" /codon_start=1 /transl_table=11 /product="secreted protein" /protein_id="YP_004392758.1" /db_xref="GI:330829806" /db_xref="GeneID:10488023" /translation="MKVKKLVFVFSLLCAAHNVFAFEHPGVLLNKTDIEFVRQKVSNE VEPWFSSYKNMLASPLANRSYLPTAKWDSMACGGPDGEGIAQRCKIEREDARAAYTQA LAWLYSGDNVYAENSINIMNAWSEQFTGHHTGQNQALQASWAAAVWARAAEIIKHTYI IDGSSKWNSDKIKKFEHMLRSRYIDDINGQKTDCHFGNWQAVITEAKLNSAVFLDDQK LFDESLERFHKYFPTYVYLYSDGGLPKPIAGCYSHDELDKFNSYWSITNKTTPLKQGH AQETCRDLEHLAYGVAGFVNTAQTAYVQGVDLYSQEKERFISVMEFNAALDMAGNRDL LNECGMNVPVLGGLKGTMHIAYNHISKINGVYLPNTEKWLLENGSQRPQGFFHYLWEE LTHTK" misc_feature complement(2368769..>2369422) /locus_tag="B565_2106" /note="Alginate Lyase A1-III; enzymatically depolymerizes alginate, a complex copolymer of beta-D-mannuronate and alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic bond; Region: AlgLyase; cl00179" /db_xref="CDD:193695" gene complement(2369809..2370438) /locus_tag="B565_2107" /db_xref="GeneID:10488024" CDS complement(2369809..2370438) /locus_tag="B565_2107" /codon_start=1 /transl_table=11 /product="KHG/KDPG family aldolase/PfkB family carbohydrate kinase" /protein_id="YP_004392759.1" /db_xref="GI:330829807" /db_xref="GeneID:10488024" /translation="MSSITEQLQALKVIPVIAIEQAEDIIPLGAALANNGLPVAEITF RSAAAAEAIRLLRQSQPEMLIGAGTVLNREQVIAAKEAGATFIVSPGFNPNTVKACQE LDIPIIPGVNNPSTIEAALEMGLTTLKFFPAEASGGSAMIKALLAPYTQITLMPTGGI SPHNINEYLAIPRVIACGGSWMVDKKLIAEKQWEEIGRLTREAVAFLSQ" misc_feature complement(2369824..2370438) /locus_tag="B565_2107" /note="keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase; Provisional; Region: PRK05718" /db_xref="CDD:180220" misc_feature complement(2369842..2370417) /locus_tag="B565_2107" /note="KDPG and KHG aldolase; Region: KDPG_aldolase; cd00452" /db_xref="CDD:188632" misc_feature complement(order(2369968..2369970,2370046..2370048, 2370052..2370054,2370232..2370234,2370304..2370306, 2370316..2370318,2370391..2370393)) /locus_tag="B565_2107" /note="active site" /db_xref="CDD:188632" misc_feature complement(order(2369992..2369997,2370007..2370009, 2370043..2370048,2370073..2370075,2370085..2370087, 2370091..2370102,2370160..2370171,2370226..2370228, 2370232..2370234,2370304..2370306)) /locus_tag="B565_2107" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:188632" misc_feature complement(2370052..2370054) /locus_tag="B565_2107" /note="catalytic residue [active]" /db_xref="CDD:188632" gene complement(2370453..2371418) /locus_tag="B565_2108" /db_xref="GeneID:10488025" CDS complement(2370453..2371418) /locus_tag="B565_2108" /codon_start=1 /transl_table=11 /product="2-dehydro-3-deoxygluconokinase" /protein_id="YP_004392760.1" /db_xref="GI:330829808" /db_xref="GeneID:10488025" /translation="MLSKIALLGECMIELNGTPFGDMQQAFGGDTLNTAIYLARASQP TDIQVSYLTAMGQDPLSQQIIARWQQAGIDTSAVLIDQQRHPGLYLIQLDEHGERTFL YWRNDSAARYLMQHPQLPQLKQAVSDVDALYLSGISLAILPAADRQALLQWLAELHRA GVAIIFDSNYRPALWQSPADTRACYQQLLAITTLALVTDDDEQALWGDENMTQTLQRL KAAGVQQAVVKQGAAGCCYQALQTGEPTITIPTQAVSKVVDTTSAGDSFNAGFLAGYL QGQAIDECARMGHRLAGIVIQHKGAIIPESATRSVTDSFIKPASH" misc_feature complement(2370513..2371409) /locus_tag="B565_2108" /note="2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the...; Region: KdgK; cd01166" /db_xref="CDD:29350" misc_feature complement(order(2370516..2370518,2370624..2370626, 2370633..2370635,2370906..2370908,2371008..2371010, 2371104..2371106,2371110..2371112,2371152..2371154, 2371320..2371322,2371329..2371334)) /locus_tag="B565_2108" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:29350" misc_feature complement(order(2370540..2370542,2370552..2370554, 2370618..2370620,2370627..2370635,2370663..2370665, 2370717..2370719,2370732..2370734)) /locus_tag="B565_2108" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29350" gene complement(2371408..2371935) /locus_tag="B565_2109" /db_xref="GeneID:10488026" CDS complement(2371408..2371935) /locus_tag="B565_2109" /codon_start=1 /transl_table=11 /product="major facilitator superfamily permease" /protein_id="YP_004392761.1" /db_xref="GI:330829809" /db_xref="GeneID:10488026" /translation="MTNYVEMLAQLIGLLACMIGALAFIQRQDMKLRSLLCLNGALLS IHFLMLGAVAAAISCLLCAVRTWVSGYYRTQAVMLIFMIASCGLVIPYLEHPMQFLTV LGTTLSTYALFRLDGGPLRLCMLASTVVWLIHNIWAGSWGGILLEGGFFLINSYTILT VYGIRINKEKIDYVE" misc_feature complement(2371441..2371914) /locus_tag="B565_2109" /note="Bacterial inner membrane protein; Region: Imp-YgjV; pfam10688" /db_xref="CDD:151184" gene complement(2371988..2372749) /locus_tag="B565_2110" /db_xref="GeneID:10488027" CDS complement(2371988..2372749) /locus_tag="B565_2110" /codon_start=1 /transl_table=11 /product="2-deoxy-D-gluconate 3-dehydrogenase" /protein_id="YP_004392762.1" /db_xref="GI:330829810" /db_xref="GeneID:10488027" /translation="MILNAFDLKGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVE PTDTMIKVEAIGQKFLSLKADVSKVSELPLLIEQAVSHFGHIDVLVNNAGIIRRDDAI NFSEKDWDEVMDINIKSLFFMSQAVAKQFMAQGNGGKIINIASMLSYQGGIRVPSYTA SKSGVMGLTRLLANEWASHGINVNAIAPGYMATNNTAALRADDDRNAAILERIPAGRW GIPDDMMGPVVFLASSASDYINGYTLAVDGGWLAR" misc_feature complement(2371991..2372749) /locus_tag="B565_2110" /note="2-deoxy-D-gluconate 3-dehydrogenase; Validated; Region: PRK08993" /db_xref="CDD:181605" misc_feature complement(2371994..2372734) /locus_tag="B565_2110" /note="gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs; Region: Ga5DH-like_SDR_c; cd05347" /db_xref="CDD:187605" misc_feature complement(order(2372162..2372173,2372177..2372188, 2372264..2372266,2372276..2372278,2372315..2372323, 2372405..2372407,2372465..2372476,2372552..2372560, 2372621..2372629,2372684..2372695,2372699..2372701)) /locus_tag="B565_2110" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:187605" misc_feature complement(order(2372222..2372230,2372234..2372242, 2372246..2372251,2372258..2372263,2372270..2372275, 2372282..2372287,2372303..2372311,2372366..2372368, 2372375..2372377,2372384..2372389,2372396..2372398, 2372411..2372413,2372420..2372425,2372432..2372434, 2372438..2372452,2372543..2372545)) /locus_tag="B565_2110" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187605" misc_feature complement(order(2372264..2372266,2372276..2372278, 2372315..2372317,2372402..2372404)) /locus_tag="B565_2110" /note="active site" /db_xref="CDD:187605" gene complement(2372841..2373677) /locus_tag="B565_2111" /db_xref="GeneID:10488028" CDS complement(2372841..2373677) /locus_tag="B565_2111" /codon_start=1 /transl_table=11 /product="4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase" /protein_id="YP_004392763.1" /db_xref="GI:330829811" /db_xref="GeneID:10488028" /translation="MDIRESIHSEHAKQLDTDGLRNEFLVEDIFAADLVSMTYSHIDR IVFGGIMPVTSELGFANDLGKAFGVTYFLERRELGLINIGGPGIVMVDGATYEIGSAE ALYVGKGARELSFASVSSDKPAKFYYNSAPAHTAFPTRKITQDEAAPTTLGDAATSNR RTIYKYLVPDVLPTCQLLMGMTQLEDGSLWNTMPCHTHERRMEVYFYFNMQDDAAVFH MMGKPAETRHIVVQNEQAVISPSWSIHSGVGTQAYTFIWGMVGENQVFGDMDHVAIKD LR" misc_feature complement(2372844..2373677) /locus_tag="B565_2111" /note="KduI/IolB family; Region: KduI; cl01508" /db_xref="CDD:194154" gene complement(2373798..2375192) /locus_tag="B565_2112" /db_xref="GeneID:10488029" CDS complement(2373798..2375192) /locus_tag="B565_2112" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine-regulated outer membrane porin" /protein_id="YP_004392764.1" /db_xref="GI:330829812" /db_xref="GeneID:10488029" /translation="MKGKVFTPTLIMLGLMSVYGNANASAVSDDFQKAFINDSRLSLN SALYFRHRDVKDANTGSYSADGSQGGIKNQTANIALDFNGGYYKDIIGLDFMAASNIK LGSSVGQSEILLYDYDCKGDGTLNPCESSYAAIPIAALKAKYGDDNVLFKMSGGYTTI NSGTIKNSWGLNPHAYRGIDSSLALYNWKLTYAWADQFRNDWTDSFHDMTNTWHQNEA SNLSGVKPGQIIDYIHSAGISYNTGETLYDLAYGEGEGYRKNWHLLVTDNHKFDNGAV LTSTGYYQGGKYLEEKSNVKDPSQEYYVGAGITLAKDNVTYFTGYSQNKSESTKDYNF RLTPWANSDKRDFQQTLSSLEDYNVAGAKAVKVGIKYNMLDFGLPNLTLGTSANYAWH VVSDVSKVKEQRTYDGTMQSLDFLITYKFNAGAVKDINMTVLPALFRSKDTNAKQDRN DIRVIFTHSLSLLN" misc_feature complement(<2374863..2375165) /locus_tag="B565_2112" /note="putative outer membrane porin protein; Provisional; Region: PRK11379" /db_xref="CDD:183109" misc_feature complement(2373807..>2374127) /locus_tag="B565_2112" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:190677" gene complement(2375217..2375366) /locus_tag="B565_2113" /db_xref="GeneID:10488030" CDS complement(2375217..2375366) /locus_tag="B565_2113" /codon_start=1 /transl_table=11 /product="sugar isomerase" /protein_id="YP_004392765.1" /db_xref="GI:330829813" /db_xref="GeneID:10488030" /translation="MFSELIKEMADAGINPPVFKSGNISGSSEHNKLLLKRYKDKVPE LTANN" misc_feature complement(2375232..>2375366) /locus_tag="B565_2113" /note="SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars; Region: SIS; cl00389" /db_xref="CDD:185960" gene complement(2375963..2377120) /locus_tag="B565_2114" /db_xref="GeneID:10488031" CDS complement(2375963..2377120) /locus_tag="B565_2114" /codon_start=1 /transl_table=11 /product="glycosyl hydrolase Family 88" /protein_id="YP_004392766.1" /db_xref="GI:330829814" /db_xref="GeneID:10488031" /translation="MKKLNSALFDALTPITDVEVKDELRWACHKIKTLAIKMGDKFPS ACAVNNRYLLKENNDWTNGFWTGMLLIAYEFTGDVFFKNKLQEIIDSFVSRLTNHVVL DHHDIGFLYSLSLLAAKQVFNTEEFDSAIVLAADKLLARYHSDAKFIQAWGDMDNDQE YRLIIDSLINLPLLYRAHEISGDDNYASVAVNHFKRVTENIFREDNSSYHTYFFDRVS KLPLKGETFQGYSDSSCWARGQAWALLGLPLTYKYHPELVDSEKYTAVCEYFFSHLPE DGIPYWDLHFKAENNQPRDSSALSIAICGLLEASKLFEHADYQHISRKLLKCLSDHMA SRDDEDCDGLLKHGVYAFALGKGIDECNVWGDYYYMEALYRVYSNQWRTYW" misc_feature complement(2375990..2377012) /locus_tag="B565_2114" /note="LanC-like proteins. LanC is the cyclase enzyme of the lanthionine synthetase. Lanthionine is a lantibiotic, a unique class of peptide antibiotics. They are ribosomally synthesized as a precursor peptide and then post-translationally modified to contain...; Region: LanC_like; cl04955" /db_xref="CDD:195013" gene complement(2377132..2377848) /locus_tag="B565_2115" /db_xref="GeneID:10488032" CDS complement(2377132..2377848) /locus_tag="B565_2115" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392767.1" /db_xref="GI:330829815" /db_xref="GeneID:10488032" /translation="MSHLVEFKNNIFSIIDKISETQTEQIECAAEIFKNTVKNKGIIY AIGSGHSFAGAIEFAGRAGGFVNTRALDNFYGHSGWFENVEGIGDVFASLLDLQQHDA FVIISNSGNKALQVELAQKLKSAGIKIIAIVNRKDADKSIAKHSSGLKLADLADVVID NCCFKGDCSIEIPESELKIGPTSSLAVAYIANCISIRATELVCAAGISVPILRSINQP GGKEYNLELLSEYRSRVFTI" misc_feature complement(2377141..2377833) /locus_tag="B565_2115" /note="hypothetical protein; Provisional; Region: PRK02947" /db_xref="CDD:179510" misc_feature complement(2377261..2377779) /locus_tag="B565_2115" /note="RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose...; Region: SIS_RpiR; cd05013" /db_xref="CDD:88408" misc_feature complement(order(2377528..2377530,2377696..2377698)) /locus_tag="B565_2115" /note="putative active site [active]" /db_xref="CDD:88408" gene complement(2377845..2378249) /locus_tag="B565_2116" /db_xref="GeneID:10488033" CDS complement(2377845..2378249) /locus_tag="B565_2116" /codon_start=1 /transl_table=11 /product="fructose-specific phosphotransferase enzyme iib component" /protein_id="YP_004392768.1" /db_xref="GI:330829816" /db_xref="GeneID:10488033" /translation="MVIDDQVTSNDVEKNILRMAAPAGVNTSIISTQTAIENISAGKY AGQQVLVLVKHPGVIKKLVDAGLDIKEFNIGNMSNRLETTQVKRSISVTHAEKLDILD LINRGIKITARMVPDDGEELITSFTSNFWTAS" misc_feature complement(2377881..2378249) /locus_tag="B565_2116" /note="Mannose/sorbose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four...; Region: PTS_IIB_man; cl00021" /db_xref="CDD:193616" gene complement(2378361..2379137) /locus_tag="B565_2117" /db_xref="GeneID:10488034" CDS complement(2378361..2379137) /locus_tag="B565_2117" /codon_start=1 /transl_table=11 /product="PTS system, IID component" /protein_id="YP_004392769.1" /db_xref="GI:330829817" /db_xref="GeneID:10488034" /translation="MNKIINKVFWRWFFFGQAGWNYKTMQGLGYLYSIIPFLKHKYKS EKELVSAADNHVQFFNCNNTMAASILGVNIALENDIGTEGKDAITSTKMGLMGPLAGI GDTLFFVIPTTICGSIASYLALQGNPLGLLLWPAFGLIRLMFMRYSLKVGYNEGVKLV GQLSTKLNKITKSANILGLTVVGALIPTVVKAKLSFEFSYGDVSLKLQNIADQLMPGL MPLFVVLLTYWLLGLKGMNSTKVIFILMFFGIVTYNLGIF" misc_feature complement(2378364..2379131) /locus_tag="B565_2117" /note="PTS system mannose/fructose/sorbose family IID component; Region: EIID-AGA; cl01507" /db_xref="CDD:186441" gene complement(2379130..2379915) /locus_tag="B565_2118" /db_xref="GeneID:10488035" CDS complement(2379130..2379915) /locus_tag="B565_2118" /codon_start=1 /transl_table=11 /product="PTS system, IIC component" /protein_id="YP_004392770.1" /db_xref="GI:330829818" /db_xref="GeneID:10488035" /translation="MLEHIEMWQILLLTAYSALAIYDGNNTTFGLVKPTMAGFFAGVI MGDIQTGLMVGGTLNLLVLGVGNFGGASIPDYMTGALLGTAFAVMSGKGAEFGATIAI PIGLLMVQLDVLARFTNTFIQNKAERLIANGEPCKAAKMNLLGIIPTSLSRMIPVFLA LSLGSVFVNDIVSYIPEAIMNGLKVAGGMLPALGIAILLRYLPIKKNMSFLIIGFFLS AYLSVPVLGVALVGVAIAIAYFNSNDDVIQATTNVQNEVMGDE" misc_feature complement(2379244..2379906) /locus_tag="B565_2118" /note="PTS system sorbose-specific iic component; Region: EII-Sor; cl01506" /db_xref="CDD:186440" gene complement(2380326..2381072) /locus_tag="B565_2119" /db_xref="GeneID:10488036" CDS complement(2380326..2381072) /locus_tag="B565_2119" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_004392771.1" /db_xref="GI:330829819" /db_xref="GeneID:10488036" /translation="MSSSVKYLTIKNDLIQEINEGKYTPGQKFYSEAELKLKYSVSSA TVIKAIHELVNEGFLFRQQGKGTFISKSKRNKHVLVSESDLSVKLNKSQVTLIDVAKE ASESINKILNRAFDSYFYKIVRLKSDNDIPYAVQTSYIPENYLDPKKLAEKSGYLSLY EHLAEFNKIEMYSMPFTEEVTVVSNVDVYIAKALSIPEGSAVVKILRTTYKTSGEIIE YIETFKRVESFYLKFESVRGAGSGNTVDIS" misc_feature complement(2380368..2381072) /locus_tag="B565_2119" /note="Transcriptional regulators [Transcription]; Region: PhnF; COG2188" /db_xref="CDD:32371" misc_feature complement(2380863..2381057) /locus_tag="B565_2119" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature complement(order(2380872..2380883,2380887..2380892, 2380920..2380922,2380929..2380934,2380938..2380952, 2380974..2380979,2380983..2380985,2381052..2381054)) /locus_tag="B565_2119" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature complement(2380386..2380802) /locus_tag="B565_2119" /note="UTRA domain; Region: UTRA; cl06649" /db_xref="CDD:195338" gene 2381652..2382317 /locus_tag="B565_2120" /db_xref="GeneID:10488037" CDS 2381652..2382317 /locus_tag="B565_2120" /codon_start=1 /transl_table=11 /product="hydrogenase 4 Fe-S subunit" /protein_id="YP_004392772.1" /db_xref="GI:330829820" /db_xref="GeneID:10488037" /translation="MNRFVIADPKLCIGCGTCMAACSEVHKAQGLQQAPRLTVMRHEQ ATMPVQCRHCDDAPCIKVCPVEAIRQTGDCVQLNESLCIGCNLCAVACPFGAIQSGGS RPVAVATSYDTYIPCSIRSSNPSTSAGLRCFGEDLLSWEPGVRSIAVKCDLCEFRADG PACVGACPSQALKLVNDGDTERAARIRRQQAADTNPQGASAFSAPATALPASDLSTTE GVR" misc_feature 2381652..>2382182 /locus_tag="B565_2120" /note="putative oxidoreductase Fe-S binding subunit; Reviewed; Region: PRK12769" /db_xref="CDD:183733" gene 2382317..2384188 /locus_tag="B565_2121" /db_xref="GeneID:10488038" CDS 2382317..2384188 /locus_tag="B565_2121" /codon_start=1 /transl_table=11 /product="hydrogenase-4 component B" /protein_id="YP_004392773.1" /db_xref="GI:330829821" /db_xref="GeneID:10488038" /translation="MLSPLVMATLLLFLLGAAAGLLLQKLPALANRLNSGLALLGSLA GLVAAIQIFAQGAPVDGQLWLLGSVHLDMLSALMLLVISTVGVAVALYSFAYIREYQG KGDVAIGALMNLFLFAMVGMVLADNALGFLLCYELVTLTTYWLVKTNPEAAKQSRLYL VMNHIGMALVLIAFWLLCRESGSLEFAALREHHLAGALASLVFLLSFCGFGLRAGFVP LHGWLPVAEPVAPSHISALMSGVMVKLGLFGILRVSIDFLGASQLWWGYVVLIFGACS AVLGVLFALAEHDLKRLLAYHTVENIGIILMGMGIGMIGIANQQPALVVLGLLGALYH LLNHAIFKSLLFMGTGSVMFRLHTRDMDKMGGLAKLMPWTALAFLIGAMAISALPPLN GFVSEWFIYQSLLSMTKLGTSVVAPLAVVMLAVTGAMAVMCFVKVYGICFCGAPRSEH ASHAREVPGAMVAGTLLLAAVCLVLGLGAPWIAPHIASYGQALVSGQMNVATGATLLP LDSSQAILSPPVIAITLLGLFLIPLLVLAIFKGPKLGRRHAGTPWACGYAYEERMSLT SGGVTHTLRQLCAPLYRKQPQLDLASALHGVGDTSGTTSWLLHGVVLALFILMAVGV" misc_feature 2382464..2384161 /locus_tag="B565_2121" /note="hydrogenase 4 subunit B; Validated; Region: PRK06521" /db_xref="CDD:180602" misc_feature 2382689..2383528 /locus_tag="B565_2121" /note="NADH-Ubiquinone/plastoquinone (complex I), various chains; Region: Oxidored_q1; cl14187" /db_xref="CDD:187256" gene 2384190..2385143 /locus_tag="B565_2122" /db_xref="GeneID:10488039" CDS 2384190..2385143 /locus_tag="B565_2122" /codon_start=1 /transl_table=11 /product="hydrogenase-4 component C" /protein_id="YP_004392774.1" /db_xref="GI:330829822" /db_xref="GeneID:10488039" /translation="MPVLEMPSWGMVALALTQAIAMLALAPLATGFNRVLRAKMHSRQ GPGLLQDYRDIAKLLRRQEVTPEPAGIIFNLMPALLIAALLLVGMALPTLTHESPFPI AGDLITDIYLFAIFRFFFSLAGLDSGSMFAGIGARRELTLGIMVEPILVLACFIMAMM VGSSDLGNISSYVATQPLAAPIATLLAGAACAFAVFVEMGKLPFDCAEAEQELQEGPL TEYSGAGLALLKLSIGLKQLVVVQLFLVIFLPFGKAANWSLPALIGAALILACKLLVA FLLAGIIENAMARTQFVRTHKLTRYGLGLALLALLAYLVGV" misc_feature 2384220..>2384897 /locus_tag="B565_2122" /note="NADH dehydrogenase; Region: NADHdh; cl00469" /db_xref="CDD:186018" gene 2385224..2386942 /locus_tag="B565_2123" /db_xref="GeneID:10488040" CDS 2385224..2386942 /locus_tag="B565_2123" /codon_start=1 /transl_table=11 /product="formate hydrogenlyase subunit 5" /protein_id="YP_004392775.1" /db_xref="GI:330829823" /db_xref="GeneID:10488040" /translation="MTIAISDRIGCDYIQQVRAQLPHAIVDEEWQTADQATITVKPTS LVETASLIFHQLGGWLPLSFANDERSLNGHFAVYHVFSMEGDTKCWITVKVLVDADTQ EYPSITPTIPAAVWGEREIRDMYGLRAIGLPDERRLVLPDDWPEDIHPLRKDAMDYRQ RPMPTTDTETYPFVNELGSDANRIVPVGPLHITSDEPGHFRLFVDGEDIIDADYRLFY VHRGMEKLAETRMGYNEVAFLTDRVCGICGFTHSVAYTTSVENAMGIPVPERAKMIRA VLLEVERLHSHILNIGLSSHFTGFDTGFMQFFRVREKSMTLAELLTGARKTYGLNLIG GVRRDIFKEDRIKGAQLVRELRDELKPLVAMLLDTANISSRLIGIGKLEPQIARDFSC VGPMMRASGFKRDVRRVHDFAGYRELPMEIQTKAGCDVQSRVLVRIHELYDSLDMIEF GLEHLPEGPLLTEGFTYQPGKFALGFTEAPRGENVHWSMTGDNQKLFRWRCRAATYAN WPALRYMLRGNTVADAPLIIGSLDPCYSCTDRVTLVDPKKGKSTVVSYKEIERYGIDR KNSPLK" misc_feature 2385239..2385730 /locus_tag="B565_2123" /note="Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Region: Complex1_30kDa; cl00539" /db_xref="CDD:193860" misc_feature 2385746..2386885 /locus_tag="B565_2123" /note="Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Region: Complex1_49kDa; cl00417" /db_xref="CDD:193809" gene 2386952..2387509 /locus_tag="B565_2124" /db_xref="GeneID:10488041" CDS 2386952..2387509 /locus_tag="B565_2124" /codon_start=1 /transl_table=11 /product="hydrogenase-4 component H" /protein_id="YP_004392776.1" /db_xref="GI:330829824" /db_xref="GeneID:10488041" /translation="MIKLFKTILKAGTPTAKYPFAPIDVNRDFRGKPKYQADQCIACA ACTKACPANALVMEVDMETGERRWEISMARCIFCGRCEEVCPTRAIALSPEFELAVTN KADLYEEARFALAPCTLCGTYFAPSKLVALVEDTLKQAGTPLATPERLHHCPDCKRKQ SMLSQPDSALITPIATPMAAQKEWM" misc_feature 2386952..2387446 /locus_tag="B565_2124" /note="hydrogenase 4 subunit H; Validated; Region: PRK08222" /db_xref="CDD:181301" misc_feature <2387051..>2387212 /locus_tag="B565_2124" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" gene 2387509..2388324 /locus_tag="B565_2125" /db_xref="GeneID:10488042" CDS 2387509..2388324 /locus_tag="B565_2125" /codon_start=1 /transl_table=11 /product="formate hydrogenlyase subunit 7" /protein_id="YP_004392777.1" /db_xref="GI:330829825" /db_xref="GeneID:10488042" /translation="MSKIQGIEPVVGHAHTRAVPLAQDPEITKLKKTLLKDIRRSAYV YRVDCGGCNACEIEIFATITPLFDAERFGIKVVASPRHADILLFTGAVTRAMRVPALR AYEAAPDPKICIAYGACGCDGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATIYGF AVALGLLEQKLKATSHEVQPGERVELRHTGIPNEIRVMIEREARRMAGYRQGRIIADE FMALLEGATQQDVDLRIQSYLDQHDDPRLSEIVNNLANACLNRAAGKGEAVHG" misc_feature 2387617..2388063 /locus_tag="B565_2125" /note="NADH ubiquinone oxidoreductase, 20 Kd subunit; Region: Oxidored_q6; cl00419" /db_xref="CDD:193811" gene 2388317..2388730 /locus_tag="B565_2126" /db_xref="GeneID:10488043" CDS 2388317..2388730 /locus_tag="B565_2126" /codon_start=1 /transl_table=11 /product="formate hydrogenlyase maturation protein HycH" /protein_id="YP_004392778.1" /db_xref="GI:330829826" /db_xref="GeneID:10488043" /translation="MADEVFFYRLSRKFVDEQFDVPEEAREVMYYSLAIGHHLGIVDC LRADLVCSLTGYRDWVAKLPEGSEARRKMEGFLTFGEITIYREHCHMLACAFDRLRKA DNLLDEQELGWTNTFMDQLTALFNDPHMYLMVRSR" misc_feature 2388323..2388727 /locus_tag="B565_2126" /note="Formate hydrogenlyase maturation protein HycH; Region: HycH; cl06472" /db_xref="CDD:186687" gene 2388730..2389221 /locus_tag="B565_2127" /db_xref="GeneID:10488044" CDS 2388730..2389221 /locus_tag="B565_2127" /codon_start=1 /transl_table=11 /product="hydrogenase 3 maturation protease" /protein_id="YP_004392779.1" /db_xref="GI:330829827" /db_xref="GeneID:10488044" /translation="MGCNLVLTVGNAMMGDDGAGPYLADKLQATPLPGWIHIDGGIAP ENVVYKVRELQPERVVLVDAAEIGEKAGTLQVIPPETIAEMFIFSTHNMPLNFLIDEL KTFVPEVIFVGVQPAIVAFSFPMTEMVSEAMDYLYQHLDAAKDTDLLIEKLEQWNIAN AKR" misc_feature 2388742..2389149 /locus_tag="B565_2127" /note="Endopeptidases belonging to membrane-bound hydrogen evolving hydrogenase group. In hydrogenase 3 from E coli, the maturation of the large subunit (HycE) requires the cleavage of a C-terminal peptide by the endopeptidase HycI, before the final formation...; Region: H2MP_MemB-H2evol; cd06067" /db_xref="CDD:99877" misc_feature order(2388778..2388780,2388916..2388918,2389000..2389002) /locus_tag="B565_2127" /note="nickel binding site [ion binding]; other site" /db_xref="CDD:99877" gene 2389435..2389522 /locus_tag="B565_t054" /db_xref="GeneID:10488045" tRNA 2389435..2389522 /locus_tag="B565_t054" /product="tRNA-Sec" /db_xref="GeneID:10488045" gene 2389841..2391319 /locus_tag="B565_2128" /db_xref="GeneID:10490039" CDS 2389841..2391319 /locus_tag="B565_2128" /codon_start=1 /transl_table=11 /product="L-seryl-tRNA selenium transferase" /protein_id="YP_004392780.1" /db_xref="GI:330829828" /db_xref="GeneID:10490039" /translation="MPNSSHAPAIPHRQPASGTAADDSLPDSQQQPNQQQTRRLPQVE QLLQQPFLAGFIEALSRPLVTQAVRDTLSELRQSEDFRQHDVAPGQIEALIAKRCQQQ LRQRQTRVINATGTLVHTNLGRSPLSADLWDEVRDLNTGYNNLELDLATGKRGGRKGL IAPLLRCLTQAEDSLVVNNNAASLFLLLQEVAKGREVIVSRGEQIQIGGGFRIPDILA LSGAKLVEVGTTNITTAKDYLDAITDQTALVLMVHRSNFAIRGFTESPDIGEVARALP EHVVLAVDQGSGLTTEEFAPDETSVRQYIKAGADLVCYSGDKLLGGPQSGIISGRSDL IKRLEKHPMMRTFRPSRIVYSLLERLLIHKLNKSPIGEGIAQRTLSNPAAMQARASQL MAALPSCFVPVPAQLVVGGGTLPDEFYPAPALECTDPRPAQQLLDALRELPVPVIATV RQQKVLLNMATLLPTEMELLIAQLRELLLPAPFNATNATEEP" misc_feature 2389967..2391244 /locus_tag="B565_2128" /note="seryl-tRNA(sec) selenium transferase; Region: selA; TIGR00474" /db_xref="CDD:161897" misc_feature 2389967..2390068 /locus_tag="B565_2128" /note="Selenocysteine synthase N terminal; Region: Se-cys_synth_N; pfam12390" /db_xref="CDD:193005" misc_feature 2390168..2391226 /locus_tag="B565_2128" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl00321" /db_xref="CDD:193768" gene 2391324..2393207 /locus_tag="B565_2129" /db_xref="GeneID:10488046" CDS 2391324..2393207 /locus_tag="B565_2129" /codon_start=1 /transl_table=11 /product="Selenocysteine-specific translation elongation factor" /protein_id="YP_004392781.1" /db_xref="GI:330829829" /db_xref="GeneID:10488046" /translation="MTPYRAVIGLAGHVDHGKTLLIKALTGITTARAHEQAIGMTQDL GFAHFDDGQGNTIGVIDVPGHERYIRNMVAGLWSLDLVLLVIAADEGWMPMTGDHLRL LKAMGVPRLLVCINKCDLVSPDELLLLEESLLERVMDESGMVPDIVSVSAKTGENMAA LHTAIVRQLAELPTSHAAREQSAPRLYVDRVFTANGTGTVLTGTLQQGRLKVGDKLRL YPADREVQVRSLQAYHQSVDEIGAVCRVAVGLKKVPHKEVARGHCLTNAAGQCEAATH LIVRLCEVGGSIREQRNREVEVALGSWHGRARFVPIKDTQLARLIFTSPIPCFFGQPL AIIRHGSSELLHGARIVWCGDIHPARRKALHTLLGELPDDLEGYNPAALQLGLNGYVL ASRFDQQPEQATPLGEWLLDSCWLAQSRDQLLATLASEPLSAAELATRFGIALPVTQA LLQQLKSEQHIRLHHDKWQPGSGESEDDLGEEAQLVLKVVRDQGKEGYEPGKLGPGGV ELDPFITRKLPVALQQGLQQKGALQKQLRNLARLKYLVQLDGPIYYDAVLYNQMVAAV LAGQQVGALIDMASLKEITGLSRKYAIPFCLRMEMDGWVRREENERRVLRLPQTQDEM EPA" misc_feature 2391342..2391824 /locus_tag="B565_2129" /note="SelB subfamily. SelB is an elongation factor needed for the co-translational incorporation of selenocysteine. Selenocysteine is coded by a UGA stop codon in combination with a specific downstream mRNA hairpin. In bacteria, the C-terminal part of...; Region: SelB; cd04171" /db_xref="CDD:133371" misc_feature 2391345..2391830 /locus_tag="B565_2129" /note="Elongation factor Tu GTP binding domain; Region: GTP_EFTU; pfam00009" /db_xref="CDD:189340" misc_feature 2391357..2391380 /locus_tag="B565_2129" /note="G1 box; other site" /db_xref="CDD:133371" misc_feature order(2391360..2391362,2391366..2391368,2391378..2391383, 2391390..2391392,2391399..2391404,2391456..2391461, 2391516..2391521,2391588..2391593,2391705..2391707, 2391717..2391719) /locus_tag="B565_2129" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:133371" misc_feature order(2391366..2391383,2391669..2391674,2391678..2391680, 2391774..2391782) /locus_tag="B565_2129" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133371" misc_feature order(2391414..2391419,2391420..2391458) /locus_tag="B565_2129" /note="Switch I region; other site" /db_xref="CDD:133371" misc_feature 2391444..2391446 /locus_tag="B565_2129" /note="G2 box; other site" /db_xref="CDD:133371" misc_feature 2391504..2391515 /locus_tag="B565_2129" /note="G3 box; other site" /db_xref="CDD:133371" misc_feature 2391510..2391566 /locus_tag="B565_2129" /note="Switch II region; other site" /db_xref="CDD:133371" misc_feature 2391669..2391680 /locus_tag="B565_2129" /note="G4 box; other site" /db_xref="CDD:133371" misc_feature 2391774..2391782 /locus_tag="B565_2129" /note="G5 box; other site" /db_xref="CDD:133371" misc_feature 2391873..2392121 /locus_tag="B565_2129" /note="selB_II: this subfamily represents the domain of elongation factor SelB, homologous to domain II of EF-Tu. SelB may function by replacing EF-Tu. In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires...; Region: selB_II; cd03696" /db_xref="CDD:58087" misc_feature 2393049..>2393135 /locus_tag="B565_2129" /note="Elongation factor SelB, winged helix; Region: SelB-wing_3; pfam09107" /db_xref="CDD:192209" gene 2393204..2395630 /locus_tag="B565_2130" /db_xref="GeneID:10488047" CDS 2393204..2395630 /locus_tag="B565_2130" /codon_start=1 /transl_table=11 /product="hydrogenase maturation protein HypF" /protein_id="YP_004392782.1" /db_xref="GI:330829830" /db_xref="GeneID:10488047" /translation="MSATIAPSSSPNPVANRLRREFHIDGIVQGVGFRPFVYGLALRH GLTGYVLNDANGVTIGAEGSPEQLAAFARELRELAPSLSRIDHFNERELPQDPDPDYN GAFHIKASQQQSAATVAISPDQGMCEACANDVANPKDRHHHYPFTNCTHCGPRYTIIR RLPYDRPHTAMADFAMCPRCAAAYENPLDRRYHAQPVSCPECGPHLTWRSGNGDALAE REDAQQAAASALQAGSLIAVKGMGGYHLMCDARNEQSVARLRTLKRRARKPLAVMMGS LAEAKLHVTGSEDEWKLLASQARPITLLHKSKNDDRHSESGPSAAPLAEGIAPGIPYL GVMLPYTPLHQLLLDACAMPLVATSANGRGSPILIECEAVVRELGSEIDGILDHNRPI LHPCDDSLVQWAGGRRQTLRLARGYAPCTPSLQQAVKVPLLAVGAQQKNQLALAFSRQ RIYSPYIGDLHSLPMQEHFEQTLATFRELYDLKPELLVSDRHPGYLSHQWAKSYCQDQ GATHLEVQHHHAHLLGVMAEHNIIGPVLGVAFDGTGLGDDGTLWGGELLIADVQGFER VAHLRLFKLIGGEAAIREPVRQLLGLLFESHSPEQISALDIPLIKQVPLKRISNLHQL WHLGRNAPYTSSIGRLFDAVAALLGVIDTPDYEGEAGLLLEAAALQLAPDELPFPLAF DLSQSTEGPLQIQWAELINTLVSERHKGTSTASLAAGFIRAISNLVIALAERFPGYPV ALGGGVVQNRVLMDQLVPALEAAGRQVLTSETLPLNDGGIAAGQLWFAIHHIATHQPV TTGGATLSES" misc_feature 2393258..2393527 /locus_tag="B565_2130" /note="Acylphosphatase; Region: Acylphosphatase; cl00551" /db_xref="CDD:193864" misc_feature 2393261..2395567 /locus_tag="B565_2130" /note="Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]; Region: HypF; COG0068" /db_xref="CDD:30417" misc_feature 2393579..2393683 /locus_tag="B565_2130" /note="HypF finger; Region: zf-HYPF; pfam07503" /db_xref="CDD:191760" misc_feature 2393729..2393827 /locus_tag="B565_2130" /note="HypF finger; Region: zf-HYPF; pfam07503" /db_xref="CDD:191760" misc_feature 2393915..2394445 /locus_tag="B565_2130" /note="yrdC domain; Region: Sua5_yciO_yrdC; cl00305" /db_xref="CDD:185891" gene 2395636..2395887 /locus_tag="B565_2131" /db_xref="GeneID:10488048" CDS 2395636..2395887 /locus_tag="B565_2131" /codon_start=1 /transl_table=11 /product="hydrogenase assembly chaperone HypC/HupF" /protein_id="YP_004392783.1" /db_xref="GI:330829831" /db_xref="GeneID:10488048" /translation="MCLSIPSQVVQLHPEDNCVTVDTLGVQRRVSCMLLEEPLQVGDY VLLHIGFVMSKIDQEEAQASLESFRQMVALMPKQDILPC" misc_feature 2395636..2395842 /locus_tag="B565_2131" /note="HupF/HypC family; Region: HupF_HypC; cl00394" /db_xref="CDD:193800" gene 2395881..2396999 /locus_tag="B565_2132" /db_xref="GeneID:10488049" CDS 2395881..2396999 /locus_tag="B565_2132" /codon_start=1 /transl_table=11 /product="hydrogenase expression/formation protein HypD" /protein_id="YP_004392784.1" /db_xref="GI:330829832" /db_xref="GeneID:10488049" /translation="MLTLNDLFQGFRQPEVIRALAAQITELAKLLPGPLRVMEVCGGH THTIMKYGLHQLLPANIEFVHGPGCPVCIMPKERIDQAIELARQPNVILVTLGDMIRV PGSKGTLAQQRAKGSDIRPIYDPLDALRIARENPEKTVVFFAIGFETSTPMTAALLAA AEEEGALNLLFHINHVLVPPAIHAVMADGVAKVNAFIGPSHVSVITGADIYLPIVDRY QVPVVVSGFEPVDVMEALLMMVRQKVEGRYALEVQYSRAVTASGNKAAQRLVERFFET REHFRWRGLGDINASALRLRDAFAKRDAERHFALNQTPIDDHKACQCADILRGLAKPN QCKVFGRGCTPTQPMGSCMVSSEGACNAYYRYMGIQEQ" misc_feature 2395896..2396996 /locus_tag="B565_2132" /note="Hydrogenase formation hypA family; Region: HypD; cl12072" /db_xref="CDD:196328" misc_feature 2395908..2396978 /locus_tag="B565_2132" /note="hydrogenase expression/formation protein HypD; Region: hypD; TIGR00075" /db_xref="CDD:161693" gene 2396996..2398000 /locus_tag="B565_2133" /db_xref="GeneID:10488050" CDS 2396996..2398000 /locus_tag="B565_2133" /codon_start=1 /transl_table=11 /product="hydrogenase expression/formation protein HypE" /protein_id="YP_004392785.1" /db_xref="GI:330829833" /db_xref="GeneID:10488050" /translation="MREIQLSHGGGGVEMNQLLNQLFFRHFGNEILLRGEDAALLPVE GPVAFTTDSFTVSPLFFEGGDIGKLAIAGTVNDLAMMGAKPEYLSCSFIIEEGFPYAD LARIVESMAAELAKSGARIVCGDTKVVPKGAADKIFINTSGVGTFPLPEQSRGISVRN LKAGDAILVSRDIGSHGACILMARDALQLGSDLKSDCTTLWPQVEALLQAGITPHALR DATRGGLAAVLNEWSTASQVAIELEESAIPVCDPVRGLCELYGFEPHDLANEGTMVLA LPAEQAQDALGILRQFNPAASQIGVVQASDRHKVILNNPWGSRRYLELPQGELLPRIC " misc_feature 2397023..2397901 /locus_tag="B565_2133" /note="HypE (Hydrogenase expression/formation protein). HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE dehydrates its own carbamoyl moiety in an ATP-dependent process to yield the enzyme thiocyanate. The N-terminal domain of HypE is related to the...; Region: HypE; cd02197" /db_xref="CDD:100033" misc_feature order(2397035..2397043,2397128..2397145,2397149..2397154, 2397224..2397226,2397260..2397262,2397368..2397370, 2397374..2397376,2397383..2397385,2397389..2397391, 2397407..2397409,2397413..2397415,2397647..2397652, 2397659..2397661) /locus_tag="B565_2133" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100033" misc_feature 2397038..2397997 /locus_tag="B565_2133" /note="hydrogenase expression/formation protein HypE; Region: hypE; TIGR02124" /db_xref="CDD:162715" misc_feature order(2397149..2397151,2397224..2397226,2397656..2397661) /locus_tag="B565_2133" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:100033" gene 2398070..2398411 /locus_tag="B565_2134" /db_xref="GeneID:10488051" CDS 2398070..2398411 /locus_tag="B565_2134" /codon_start=1 /transl_table=11 /product="putative hydrogenase nickel incorporation protein hypA" /protein_id="YP_004392786.1" /db_xref="GI:330829834" /db_xref="GeneID:10488051" /translation="MHEMSLAMAAIDLAAEQATQRGFTKVTALWLEVGSFSCVDPDTI AFCFEAAAKGTAVEGAQLHFQHQAAEAWCYDCNQTVSLTERGQACPGCGGYKLRVAQG DSLRITDIEVS" misc_feature 2398070..2398405 /locus_tag="B565_2134" /note="Hydrogenase expression/synthesis hypA family; Region: HypA; cl00418" /db_xref="CDD:193810" gene 2398666..2398848 /locus_tag="B565_2135" /db_xref="GeneID:10488052" CDS 2398666..2398848 /locus_tag="B565_2135" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392787.1" /db_xref="GI:330829835" /db_xref="GeneID:10488052" /translation="MISPMSTTMITPTTIIMIIPTLMITGVTMTMTMTMTISRVICTT AKGKRDYRSPAWGSVS" gene 2398830..2399480 /locus_tag="B565_2136" /db_xref="GeneID:10488053" CDS 2398830..2399480 /locus_tag="B565_2136" /codon_start=1 /transl_table=11 /product="hydrogenase nickel incorporation protein HypB" /protein_id="YP_004392788.1" /db_xref="GI:330829836" /db_xref="GeneID:10488053" /translation="MGQRQLIAIEMDVLAKNNALAAHNREHFDEAAQLVLNLVSSPGS GKTTLLCETLRQLADKRPCAVIEGDQQTSADADRIRATGVPAVQINTGKGCHLDAKMV HDACHQLPANEGGILFIENVGNLVCPASFDLGEKYKVAILSVTEGEEKPLKYPDMFAA AQLMVINKIDLLPYVSFDVARCIENAKRVNPYIQVIQVSATTGEGMDAWLNWLATA" misc_feature 2398863..2399477 /locus_tag="B565_2136" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" gene complement(2399832..2400473) /locus_tag="B565_2137" /db_xref="GeneID:10488054" CDS complement(2399832..2400473) /locus_tag="B565_2137" /codon_start=1 /transl_table=11 /product="ATPase protein DppE" /protein_id="YP_004392789.1" /db_xref="GI:330829837" /db_xref="GeneID:10488054" /translation="MLEVRNLTIAQGERPLWQGLSLTVKAGERLGISAPSGHGKTTLG RVLAGWQPVGAGGQILLDGQPVPEQVKGYNPIQLVPQHPELTFNPYRTTGQALWDVWR PDDAMLARFMVKPEWLGRKPGQLSGGELARIALLRALDPRTRLLIADEVTAQLDPQIQ RQLWQELMRECEQRGLGMLIFSHQQALLRQICHRVLRFGEPPAEQEAMARSVA" misc_feature complement(2399883..2400473) /locus_tag="B565_2137" /note="ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]; Region: SalX; COG1136" /db_xref="CDD:31331" misc_feature complement(2399886..2400473) /locus_tag="B565_2137" /note="The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane...; Region: ABC_NikE_OppD_transporters; cd03257" /db_xref="CDD:73016" misc_feature complement(2400351..2400374) /locus_tag="B565_2137" /note="Walker A/P-loop; other site" /db_xref="CDD:73016" misc_feature complement(order(2399925..2399927,2400024..2400029, 2400231..2400233,2400348..2400356,2400360..2400365)) /locus_tag="B565_2137" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73016" misc_feature complement(2400231..2400242) /locus_tag="B565_2137" /note="Q-loop/lid; other site" /db_xref="CDD:73016" misc_feature complement(2400072..2400101) /locus_tag="B565_2137" /note="ABC transporter signature motif; other site" /db_xref="CDD:73016" misc_feature complement(2400024..2400041) /locus_tag="B565_2137" /note="Walker B; other site" /db_xref="CDD:73016" misc_feature complement(2400006..2400017) /locus_tag="B565_2137" /note="D-loop; other site" /db_xref="CDD:73016" misc_feature complement(2399919..2399939) /locus_tag="B565_2137" /note="H-loop/switch region; other site" /db_xref="CDD:73016" gene complement(2400473..2401261) /locus_tag="B565_2138" /db_xref="GeneID:10488055" CDS complement(2400473..2401261) /locus_tag="B565_2138" /codon_start=1 /transl_table=11 /product="nickel/di-oligopepetide ABC transporter ATP binding protein" /protein_id="YP_004392790.1" /db_xref="GI:330829838" /db_xref="GeneID:10488055" /translation="MLSFDQVTIEAAHYSWLGRRSWQPLLTDISLQLATGEIVALVGG SGEGKSLLLQSALTLLPDNLRMRGTISLDGTPLCDASRARLRGHTLCYVPQGVSALNP LLTVERQLGRAARLCGQSGSRERLGEQLLRYQLPATTLDRFPRQLSGGMAKRILACTA ALGGARYILADEITAWLDEGLACQLLSQLRELANQGSGILWVTHDLALAARFADRIVA LHKGQVSDTLSSHHLRQGQGSEMLRAHWQALPEFNALFSVPEVS" misc_feature complement(2400506..2401243) /locus_tag="B565_2138" /note="ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Region: DppF; COG1124" /db_xref="CDD:31321" misc_feature complement(2400590..2401243) /locus_tag="B565_2138" /note="The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane...; Region: ABC_NikE_OppD_transporters; cd03257" /db_xref="CDD:73016" misc_feature complement(2401112..2401135) /locus_tag="B565_2138" /note="Walker A/P-loop; other site" /db_xref="CDD:73016" misc_feature complement(order(2400650..2400652,2400746..2400751, 2400977..2400979,2401109..2401117,2401121..2401126)) /locus_tag="B565_2138" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73016" misc_feature complement(2400977..2400988) /locus_tag="B565_2138" /note="Q-loop/lid; other site" /db_xref="CDD:73016" misc_feature complement(2400794..2400823) /locus_tag="B565_2138" /note="ABC transporter signature motif; other site" /db_xref="CDD:73016" misc_feature complement(2400746..2400763) /locus_tag="B565_2138" /note="Walker B; other site" /db_xref="CDD:73016" misc_feature complement(2400728..2400739) /locus_tag="B565_2138" /note="D-loop; other site" /db_xref="CDD:73016" misc_feature complement(2400644..2400664) /locus_tag="B565_2138" /note="H-loop/switch region; other site" /db_xref="CDD:73016" gene complement(2401255..2402070) /locus_tag="B565_2139" /db_xref="GeneID:10488056" CDS complement(2401255..2402070) /locus_tag="B565_2139" /codon_start=1 /transl_table=11 /product="dipeptide/oligopeptide/nickel ABC transporter permease" /protein_id="YP_004392791.1" /db_xref="GI:330829839" /db_xref="GeneID:10488056" /translation="MLFNPLPSIVRLAVALLGLALLAAYGWSLSHQDVPMDLLARQQP PSLAHWFGTDQMGRDLWLRAFQGTLTSLELGISTALCSGLLAMVAASVSLIHPRCDAT VRMVIDAMLALPHMLLLILICFTVGGGMHGVILAVALTHWPKLALILCAEARQIACSD YVVLARCQGMGALRRWRIHLLPGLLPQWFIGTLLMFPHAVLHSAALSFLGFGLAAHEA SLGLLLADALRYLAGGGWWLALFPGLMLLLLVLLFDQATRALQQLLWHRSEPC" misc_feature complement(<2401465..2401992) /locus_tag="B565_2139" /note="ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Region: DppC; COG1173" /db_xref="CDD:31366" misc_feature complement(<2401465..>2401671) /locus_tag="B565_2139" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cl00427" /db_xref="CDD:193813" gene complement(2402060..2403070) /locus_tag="B565_2140" /db_xref="GeneID:10488057" CDS complement(2402060..2403070) /locus_tag="B565_2140" /codon_start=1 /transl_table=11 /product="dipeptide/oligopeptide/nickel ABC transporter permease" /protein_id="YP_004392792.1" /db_xref="GI:330829840" /db_xref="GeneID:10488057" /translation="MDVPVSSPLSHSGYLLLKALLRLAGLLCLVSVATFVLLSYSPID PIKAYIGNDLLHVPPEQYARIAARWGLDQPLWLRYWHWFSQVLRGDLGYSMLYNAPVG EVIGQRFAASFLLLAGAWLLSGCFGILLGLCAGRYLNHWPDRLICRFAYLLASLPTFW VGLLLLALFAVHWPLLPVCCAWTPGLSADEADWAMRARHLLLPVTALALLGVGNIALH TRGRVAEVLASDFIRYARAQGDGGWPMLRFHVLRHALTPALCLQFASLGELIGGSLLA EKVFSYPGLGQATVDAGLRGDIPLLMGIVLFCTLLVFIGNTVASVLLARINRGWEGEH AV" misc_feature complement(2402090..2402983) /locus_tag="B565_2140" /note="ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Region: DppB; COG0601" /db_xref="CDD:30946" misc_feature complement(2402129..2402746) /locus_tag="B565_2140" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(2402129..2402134,2402141..2402146, 2402153..2402158,2402162..2402167,2402174..2402179, 2402207..2402212,2402237..2402242,2402249..2402260, 2402279..2402281,2402288..2402293,2402333..2402335, 2402384..2402386,2402393..2402398,2402408..2402410, 2402414..2402419,2402426..2402428,2402432..2402434, 2402438..2402443,2402573..2402575,2402579..2402584, 2402591..2402620,2402624..2402635,2402666..2402668, 2402681..2402686,2402693..2402698)) /locus_tag="B565_2140" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(2402243..2402260,2402573..2402617)) /locus_tag="B565_2140" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature complement(order(2402177..2402179,2402207..2402209, 2402216..2402218,2402240..2402242,2402456..2402458, 2402573..2402575)) /locus_tag="B565_2140" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature complement(order(2402312..2402314,2402324..2402329, 2402345..2402383)) /locus_tag="B565_2140" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene complement(2403055..2404677) /locus_tag="B565_2141" /db_xref="GeneID:10488058" CDS complement(2403055..2404677) /locus_tag="B565_2141" /codon_start=1 /transl_table=11 /product="nickel/dipeptide ABC transporter periplasmic protein" /protein_id="YP_004392793.1" /db_xref="GI:330829841" /db_xref="GeneID:10488058" /translation="MTVPRNSLRYYCGTTAAALLTLLLGSASHAALAAAQPVPAELKL AIGAEPTEGFDPLLGWSHGSYLLLHSPLLKQIAGDSADLSWQNVLTQAVTPSKDGKGW IITLKPDLKFSNGAPLTAEDVAFTYNSAAQGGGKIDMGNFVSAKVLSPTEVAITLSAP QSTFVNVLGSLGIVSKRDYDAKAYAQKPVGAGPYRLVSFLPGQQLVVEANPYYAGGNN DFKRLVFVFIDEESAYAAAQSSQLDVVRIAPSLAPTVPASLKLWVRPSVENRGIVFPI PPAGGKDAKGYPIGNDVTSDVAVRRAINYAIDRKLLADQLLEGHAIPAYSAVEGLPWL NKATAFKDGDVGHANALLDEAGWKMGSDGIRHKGDLRAAFTLWYTSGDSTRRDLAEAV RAMLKPIGLEVSLKSGSWEQVEREMHANPVLMGWGSLDPMELYHHYQSGSGGVEFYNP GYYSNPVVDGHLKQALDAPNWQAAVPFWQQVEWDGKTGAGVQGDAAWAWLLNVQHTYL ANRCIDLGKGAPEIHGSWSLLNNLQDWRWTCR" misc_feature complement(2403130..2404557) /locus_tag="B565_2141" /note="The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold; Region: PBP2_NikA_DppA_OppA_like_19; cd08518" /db_xref="CDD:173883" misc_feature complement(2403346..2404413) /locus_tag="B565_2141" /note="Bacterial extracellular solute-binding proteins, family 5 Middle; Region: SBP_bac_5; pfam00496" /db_xref="CDD:189574" gene complement(2404809..2405315) /locus_tag="B565_2142" /db_xref="GeneID:10488059" CDS complement(2404809..2405315) /locus_tag="B565_2142" /codon_start=1 /transl_table=11 /product="hydrogenase-2 operon protein HybE" /protein_id="YP_004392794.1" /db_xref="GI:330829842" /db_xref="GeneID:10488059" /translation="MLEIVPETAQEFAGFASDPAPLLVAQYERIAREEMQALPFYHAS MPIVAECTLFEGQWLGCVLTPWMLSVVVLPGPDQLWPVRSSSERIALQLPCGNMTFMV GDLPESGQLLSCSLMSPLDPHLGAGEGRALVSSTLKMLLSLPVQQGAGGVDLGRRRLF GARRGQPA" misc_feature complement(2404857..2405288) /locus_tag="B565_2142" /note="Protein of unknown function (DUF3457); Region: DUF3457; cl08122" /db_xref="CDD:189186" gene complement(2405330..2405860) /locus_tag="B565_2143" /db_xref="GeneID:10488060" CDS complement(2405330..2405860) /locus_tag="B565_2143" /codon_start=1 /transl_table=11 /product="hydrogenase expression/formation protein" /protein_id="YP_004392795.1" /db_xref="GI:330829843" /db_xref="GeneID:10488060" /translation="MNTLILGVGNLLLSDEAVGVRIVEALGREYRFAPGIELLDGGTA GMELLEAMASRDHIILVDAVRSGNPPGTVVTLKDEEIPTLFGRKISPHQLGLADVLSA LHMTGESPKRLTLIGVEPESLEPRIGLTPVVAAAMGEATDRILTLLAAVGAPAIVLSE QEKAEQAREGLWRSPI" misc_feature complement(2405417..2405854) /locus_tag="B565_2143" /note="Endopeptidases belonging to membrane-bound hydrogenases group. These hydrogenases transfer electrons from H2 to a cytochrome that is bound to a membrane-located complex coupling electron transfer to transmembrane proton translocation. Endopeptidase...; Region: H2MP_MemB-H2up; cd06062" /db_xref="CDD:99873" misc_feature complement(2405417..2405851) /locus_tag="B565_2143" /note="coenzyme F420-reducing hydrogenase delta subunit (putative coenzyme F420 hydrogenase processing subunit); Region: frhD; TIGR00130" /db_xref="CDD:161726" misc_feature complement(order(2405735..2405743,2405789..2405791, 2405831..2405833)) /locus_tag="B565_2143" /note="putative substrate-binding site; other site" /db_xref="CDD:99873" misc_feature complement(order(2405585..2405587,2405675..2405677, 2405813..2405815)) /locus_tag="B565_2143" /note="nickel binding site [ion binding]; other site" /db_xref="CDD:99873" gene complement(2405860..2407563) /locus_tag="B565_2144" /db_xref="GeneID:10488061" CDS complement(2405860..2407563) /locus_tag="B565_2144" /codon_start=1 /transl_table=11 /product="hydrogenase 2 large subunit" /protein_id="YP_004392796.1" /db_xref="GI:330829844" /db_xref="GeneID:10488061" /translation="MSQRITIDPITRIEGHLRIDCEIEGGKVTKAWSSGTMWRGMEEI VKGNDPRDAWMIVQRICGVCTSIHAIASVRAVENAIGAKVPVNAQFIRNLIIAAHNIH DHIVHFYQLSALDWVDITAALQANPQKAADILKGVSTWSLNSADELTKVQDKIRALVA SGQLGIFANGYWGHKEMKLSPEVNLIAVAHYLQALECQRDANRIVAILGGKSPHIQNL AVGGVANPINLDAPSVLNLERLLYVKSFIDRLGEFIEQVYKVDAAIIAAHYPEWLSLG QGAKHYLSVPELPTDANGGSFLMPGGYIENGNLAGYRPIESHQDGWLMDGIAESNKHA WYKDDEPLKPWEGKTEPNYTGWQDDGKYSWVKSPTFYGKVVEVGPLADLLVKLAAKHP ETVVHFDQLNGLYKALTGSAIKTEQLHSTMGRIIGRAVRCCVLKDTLAHQWKALVDNI GKGDTTAYIKAEIPADKEFRGVGFEEAPRGMLSHWIVIKGGKIENYQAVVPSTWNSGP RNFNDEPGPYEQALVGTPVADPAKPLEVVRTIHSFDPCMSCAVHVVDTQNGETTQVKV L" misc_feature complement(2405863..2407563) /locus_tag="B565_2144" /note="Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Region: Complex1_49kDa; cl00417" /db_xref="CDD:193809" gene complement(2407560..2408747) /locus_tag="B565_2145" /db_xref="GeneID:10488062" CDS complement(2407560..2408747) /locus_tag="B565_2145" /codon_start=1 /transl_table=11 /product="Ni/Fe-hydrogenase 2 B-type cytochrome subunit" /protein_id="YP_004392797.1" /db_xref="GI:330829845" /db_xref="GeneID:10488062" /translation="MSNHKAHPLGGKLVSWPVLVLAPFAVLCGMLILKRLVFGLGSVT DLNGGYPWGLWISFDLLIGTGFACGGWALAWAVYVFNRGEYHPLVRPALLASLFGYSL GGLSITIDVGRYWNLPYFYLPGHFNTSSVLFETAVCMTIYIGVMALEFAPVLLEKFGW KASLIRLNKIMFFVLALGALLPTMHQSSMGSLMIVAGEKIHPLWQSYELLPVFSLLTA FIMGFSIVVFEGSLVQAGLAGRGPNEKSLFYKLTQVIDIFLILFVALRFAEIVIHDKS EYLSEFNRFSIMFWSEIALMIFPLLVFHWDKSRRDSRMLFLGALSMLLGAALWRLDYS LLAFNPGNGYHYFPSAEEVLISLGFVAIEVCAYLLLIRLLPVLPSLERVHQDYQARGK ANV" misc_feature complement(2407569..2408747) /locus_tag="B565_2145" /note="Polysulphide reductase [Energy production and conversion]; Region: COG5557; cl01295" /db_xref="CDD:186416" gene complement(2408740..2409786) /locus_tag="B565_2146" /db_xref="GeneID:10488063" CDS complement(2408740..2409786) /locus_tag="B565_2146" /codon_start=1 /transl_table=11 /product="hydrogenase 2 protein" /protein_id="YP_004392798.1" /db_xref="GI:330829846" /db_xref="GeneID:10488063" /translation="MNRRNFLKFASVGALAAGTAVPGTALAAAKNKPPIPGALGMLYD STLCVGCQACVAECQRLNGNPANPAGAQTWSNNDKLTPYTNNIIQVWKSGTGEHKDQL VDGYAYIKKQCMHCVDPNCVSVCPVQALKKDPKTGIVHYDPSVCTGCRYCMVGCPFDV PKYDYDNPLGAIHKCELCNQKGLERIDQGKLPGCVEVCPTGAVIFGTREELMAEAKRR LLATPGSEYAYPRQTLSANDPYLHEVPNYQPYVYGEKEGGGTQVLVLAGVPYTKLDMP DLPELSSGARSEHIQHTLYKGMVLPMVVLTGLSVLIRRNTKNGHDHHHDDGHDQGSVQ IKDQGTTKGGKDHE" misc_feature complement(2408833..2409786) /locus_tag="B565_2146" /note="hydrogenase 2 protein HybA; Provisional; Region: PRK10882" /db_xref="CDD:182807" misc_feature complement(2409700..2409786) /locus_tag="B565_2146" /note="Tat (twin-arginine translocation) pathway signal sequence; Region: TAT_signal_seq; TIGR01409" /db_xref="CDD:162342" gene complement(2409789..2410922) /locus_tag="B565_2147" /db_xref="GeneID:10488064" CDS complement(2409789..2410922) /locus_tag="B565_2147" /codon_start=1 /transl_table=11 /product="hydrogenase subunit" /protein_id="YP_004392799.1" /db_xref="GI:330829847" /db_xref="GeneID:10488064" /translation="MVEDNFLSAHGINRRDFMKLCAGMAATLGLSQHAVAKMATALTS PERPPVIWIGAQECTGCTESLLRATHPTIENLILNTISLEYHEVLSAAFGHQAEENKH NAIKRYKGKYVLVVDGSIPLKDGGVYCMVAGEPIVDHIRRAAADAAAVIAIGSCAAWG GVPASGGNPTGAVSLEEALGNISTPIINIPGCPPNPHNFLTTVAYYITYGKLPALDSK KRPLFAYERLIHENCERRPHFDAGRFAKEFGDEGHRQGWCLYHLGCKGPETYGNCSTL EFCDVGGGIWPVGIGHPCYGCNEQGVGFSKGIFQLAKVENPTPRVDKPDVKIQEGGYT SPTATGLIGGALGVLVGVSLMTVRELGRQQKRHEAGQHPSREE" misc_feature complement(2409795..2410922) /locus_tag="B565_2147" /note="hydrogenase 2 small subunit; Provisional; Region: PRK10468" /db_xref="CDD:182483" misc_feature complement(<2410401..2410751) /locus_tag="B565_2147" /note="NADH ubiquinone oxidoreductase, 20 Kd subunit; Region: Oxidored_q6; cl00419" /db_xref="CDD:193811" gene 2412186..2413232 /locus_tag="B565_2148" /db_xref="GeneID:10488065" CDS 2412186..2413232 /locus_tag="B565_2148" /codon_start=1 /transl_table=11 /product="signal transduction family protein" /protein_id="YP_004392800.1" /db_xref="GI:330829848" /db_xref="GeneID:10488065" /translation="MTTEREQLIRSLFDEYIEMYSSRDDRLTTRFSDNFSGFAGSSDV LVTDKDEWIRITRRDFAQIPGRIRLEILAVTLQDLAADVVAVTAFFHIHLPKSEPILS RRTARLVLIFRHEAMAWKIAHSSISIPYSAARESEIYPMTSLEERQHELELIIELRTK ELAEANRKLEALSNTDGLTNIGNRRLFDNSLNQAWERCIQTEMPIALIMLDIDHFKQF NDLYGHVAGDECLRLLAHTLAQSGRRSGELVARYGGEEFVILLPHVERQSAYEIAQHI QRLIFALAQPHAQNATGLLTVSMGVACLRPSSHWQPSELVKLADAALYTAKSSGRNCI RLAESPSLPQPVCP" misc_feature 2412705..2413190 /locus_tag="B565_2148" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(2412816..2412818,2412948..2412950) /locus_tag="B565_2148" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(2412831..2412833,2412840..2412845,2412855..2412857, 2412867..2412869,2412936..2412938,2412942..2412953) /locus_tag="B565_2148" /note="active site" /db_xref="CDD:143635" misc_feature order(2412921..2412923,2413008..2413010) /locus_tag="B565_2148" /note="I-site; other site" /db_xref="CDD:143635" gene complement(2413277..2414413) /locus_tag="B565_2149" /db_xref="GeneID:10488066" CDS complement(2413277..2414413) /locus_tag="B565_2149" /codon_start=1 /transl_table=11 /product="glycosyltransferase" /protein_id="YP_004392801.1" /db_xref="GI:330829849" /db_xref="GeneID:10488066" /translation="MSMQTEPVFGKIIVVDPIPFRGGSKIATEVLLDELAKRMPGLTC HVLTQDPDSWSRCQHHPLWLPHILKGRESGIGYLLKQGWQTLLILWLMLRLGEVKCLV AASGPGVDLCCYWAARWLRCRVVQLIHGPVGCSGLSARALQRASFVFYLESTRSSLGA LLARLGETEFPSHWQPFTNGLSEIDWPKATLGGPRILWAASLLRWKGLETMLAAHQMI PDARPELMVCYLQPKGTLQPCSQPQPQLPDTHWYANPANLDEIRSRCGIFVSTSHQEP FGLSILEAMAAGLCVVIPADGAWWDRHLTDDVNCRKYQPNDPGDLARVLASLNAMPDV VKRLGHHARLHAMVHYNAADTYQSTLDQWEGMLRWDALSLAVHG" misc_feature complement(2413307..2414383) /locus_tag="B565_2149" /note="Glycosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaG; COG0438" /db_xref="CDD:30787" misc_feature complement(2413331..2414383) /locus_tag="B565_2149" /note="Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate...; Region: Glycosyltransferase_GTB_type; cl10013" /db_xref="CDD:186885" gene complement(2414426..2415697) /locus_tag="B565_2150" /db_xref="GeneID:10488067" CDS complement(2414426..2415697) /locus_tag="B565_2150" /codon_start=1 /transl_table=11 /product="glycosyltransferase" /protein_id="YP_004392802.1" /db_xref="GI:330829850" /db_xref="GeneID:10488067" /translation="MNATPVLLVHYGEDWIRGSERCLLDLLAHLDRSRFTPLLWCNSP TLAAEATTLGVETMVEPFSLLLGWQAPRFDLAAHRRLSRRARELITERQIGLVHANSA APCQWLVGVCRALQVPLVCHLHARYQPRDRFSLRVHQANVLIGVSEPVLTGWRQDGCT ADRLIRVPNGVDAARLNAGAHWPVVGMLGLPPGDMIIATVGSLIKRKGIDLLIRSLAA LMASGEEAQLLIIGSGPEREALMALAVELGVAERVHFLGERPDSAAILRGGVDLLVSG AREEVFGLTLAEAGMLGLPVSAYRVGGIPEVVEEGVTGLLATPGDWAEMADHWRQLSN PQRRCEMGRAAQLRAAQLFTVARYVDGVTAVWDAARAGRWHSTAPAPYRTLIHWAGQR LLARGCNMLASGMAKVAQKVQLGFGRRKVPE" misc_feature complement(2414603..2415679) /locus_tag="B565_2150" /note="This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to...; Region: GT1_YqgM_like; cd03801" /db_xref="CDD:99974" gene complement(2415694..2417100) /locus_tag="B565_2151" /db_xref="GeneID:10488068" CDS complement(2415694..2417100) /locus_tag="B565_2151" /codon_start=1 /transl_table=11 /product="lipid A core-O-antigen ligase" /protein_id="YP_004392803.1" /db_xref="GI:330829851" /db_xref="GeneID:10488068" /translation="MARLTPAIWASTICLVLALLWWRLPHPLLLPVLGLAIPAIWFAL RWPFLMVLGFVTFSFFRLHEVFPQLYPLKIPLLFSLAAIGALVWHILLTGRIKPYWSP ALSWLTAFFVMVSIGVLFASNRGEAIATWTGSYSKIYLMTLATAWLVRTPGDFALAVR TFVVAGCLVAMVALYNKASGIGLVEGTRVTIGRELGSVLGDPNDLALVLLFPAGFSLS LLLNQGNGVWGRLLGGLGFALTAAAIIATQSRGGLLGVCAVSGLFAWQRVKSKTLLIS LGMVALVVLFAAAGISDRASGGAAESGVDASAMGRIYAWQAAWGMALGHPLVGVGLSN FYYNYFFYSPHWDGLNHAVHSTWFGVLAETGFVGLALFIGMVAVTLRSCWRCQLAGMP PAVITAMQGVMASMVGFVISGSFLTQGFTWPIYLELALAVAAIKYVQQAATEVKATAE DHQEATRLPAVPPKGARG" misc_feature complement(2415799..2416863) /locus_tag="B565_2151" /note="O-Antigen ligase; Region: Wzy_C; cl04850" /db_xref="CDD:194980" gene complement(2417088..2418407) /locus_tag="B565_2152" /db_xref="GeneID:10488069" CDS complement(2417088..2418407) /locus_tag="B565_2152" /codon_start=1 /transl_table=11 /product="oligosaccharide translocase" /protein_id="YP_004392804.1" /db_xref="GI:330829852" /db_xref="GeneID:10488069" /translation="MKLGVNQIAMLYYAGGLLLMKGISLLMLPVLTHQLLPREYGQLE VLLTLINLGSLILGFGLVDALYRFAGLAKDEQERQQVVARMFGLVWLIALASLVLLWL LAPVVQAWLPVETRLADVRWVLCALPFEGVIGVPLAWLRMRNQARLFFVATAGKAVIQ SLLTGWWLWLGWGVSGVLASGTLTCVALALLLSLWQWRDSGIRFDWQHYRPLLRYGLP LVVSGLAGFALSGLDRWLLADVVGEALLAYYAVAGKLALAVGLLLQPFALWWYPRRFM LLREPDGLRLNAHYSVMGSVLGFVTAGIVGLTAPLLIRWLTPESYHGAIAYIPLLVLG MAVRNVSDLLNVGCFSGEKSNAQMVINLGCSALGVAGFLLAIPPFGVAGVIWTLLLVY LVRALAFYLVSQRLLPLPYRLSTLWASSLGALAMVWLGQWWAGSWLV" misc_feature complement(2417127..>2417801) /locus_tag="B565_2152" /note="Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]; Region: RfbX; COG2244" /db_xref="CDD:32425" gene 2418707..2419462 /locus_tag="B565_2153" /db_xref="GeneID:10488070" CDS 2418707..2419462 /locus_tag="B565_2153" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="YP_004392805.1" /db_xref="GI:330829853" /db_xref="GeneID:10488070" /translation="MNTINLHRMKSWAKQGETPLARQIWRLAKSARHWSCPVIPPLHR LLYRLYLLGNNALATLTRTLWWTPLFQSRLTAPAPRLYLYGGIPYISGPVTIEIGADC RLSAAMTISGRASSQTPRLVIGRNVGIGWQTTLAVGSKIVLGDNVRIAGRAFLAGYPG HPINARDRALGKPDRDEQVGAIVLEQDVWLGTGVMVMAGVTIGAGTIVAAGSVVTRDL PAGVLAAGVPATVLRPLQPQDHSDPAHASETFA" misc_feature 2419064..2419402 /locus_tag="B565_2153" /note="Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-...; Region: LbH_MAT_like; cd04647" /db_xref="CDD:100053" misc_feature order(2419082..2419084,2419088..2419090,2419112..2419114, 2419142..2419144,2419148..2419150,2419166..2419168, 2419187..2419195,2419265..2419267,2419271..2419273, 2419280..2419282,2419337..2419339,2419385..2419387) /locus_tag="B565_2153" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:100053" misc_feature order(2419088..2419090,2419094..2419096,2419187..2419189, 2419193..2419195,2419271..2419273,2419277..2419282, 2419295..2419297,2419331..2419336,2419349..2419354, 2419379..2419384,2419388..2419390) /locus_tag="B565_2153" /note="active site" /db_xref="CDD:100053" misc_feature order(2419088..2419090,2419094..2419096,2419187..2419189) /locus_tag="B565_2153" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100053" misc_feature order(2419187..2419189,2419193..2419195,2419271..2419273, 2419277..2419282,2419295..2419297,2419325..2419327, 2419331..2419336,2419349..2419354,2419373..2419375, 2419379..2419384,2419388..2419390,2419400..2419402) /locus_tag="B565_2153" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:100053" gene 2419459..2420658 /locus_tag="B565_2154" /db_xref="GeneID:10488071" CDS 2419459..2420658 /locus_tag="B565_2154" /codon_start=1 /transl_table=11 /product="glycosyltransferase" /protein_id="YP_004392806.1" /db_xref="GI:330829854" /db_xref="GeneID:10488071" /translation="MKPHSLPQLVVLGEDWGQHPSSTQHLIKRLLPDYQVLWVNSIGM RCPRFTLHDLTRIVRKLGAVLRGARHAGGQSVAPSEVSSPRVLPPLALPLPGSRLAGK INGHWLAAQIRRQLPELDRPLLWISLPSAVDLIGKLEERAVIYYCGDDFSALAGVDHQ AIAHCEARLVEKADLILAASPALASRFPPHKTRLLSHGVDLELFMPPRERPADLPSGR PIAGFYGSLSDWIDIPLLAETAAALPHWDLVLIGPVQTDISPLKGLPNIHLLGPRPHH TLAAYAQHWQVSLLPFVDNAQIRACNPLKLREYLAAGRPIVSTDFPALDGYRDQIQLP HDGESLAQAINRAAFDQPNPGWFQESGWEGLTRSEGRHTRQQQVALQSWDHKAAELNN WLKRLPG" misc_feature 2419477..2420643 /locus_tag="B565_2154" /note="Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate...; Region: GT1_like_1; cd04950" /db_xref="CDD:99999" misc_feature order(2420416..2420418,2420431..2420436,2420440..2420442) /locus_tag="B565_2154" /note="putative homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99999" gene 2420655..2423195 /locus_tag="B565_2155" /db_xref="GeneID:10488072" CDS 2420655..2423195 /locus_tag="B565_2155" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392807.1" /db_xref="GI:330829855" /db_xref="GeneID:10488072" /translation="MSRGLWLVILLCANAAMATTRLEGQTPLPMTGNQTPQRLDLSTH NWPIGSDDELVIEGHNPSARAQTLILRIDDNASVNYRSRVNLERIVAPGPFTQRFALS EWRTSQPRALALDKLTKLYLFMADNAPSMTIHRWYWEPGLTLPEGTIALDLGASTAPR FTGFEALSPGDPRLIGHPTPILRPSGDALVRDGLRNLDGVRLDLAKGRYQLTLWLDDP GEWEYLPHPFERSVLVNGEPIWAEQWQPQEWLTQRYLAGQSREALPNPDPWQLFGARQ GGPVHATLNHPGGPLTITLVGHSPDAKYLAGLLLAPYPAPTSKEALPNSGKDRAVLAD ATAIVLTKQRQLFLEKWTLAPYSPTPAPASQQLSLTPITDVAPTLQIAPLSAADALQQ AAQPVLAARGSQLLLEFAIHTATDDPAPLLVIQPPEQAGSPLALTPYYGKWHLVRPQA SGTLLAPSDQELVEGVAGLTLLAGVPRRLVLQMTVPRDAPAGRYLGNIQLLSQQQLVQ LPLTIEVLPLTLPAASKPVGIYVEAPPYLNWLSPNPEALKELIAEASRCDLERLAKLG ISGLSPALPQDEAGMQEIMGEAAGLGFVPPLLAYTPLKRWGGDPASQLDQWQARQQGL TASGLPPLAWSLFDEPDLATLPAITSLAREMKRRDPAVIRAGHFNHPGQVGLLAEVEI ALINAGFGADKADVARVRQHKVTPWFYNLGTPRAAGFYLWQSGAEGYLQWHGRMPTAL PYDPTDGRESDFMLLGPQACEAHRLSHDLLLLQQAIEDLRWLAWLEQEARYQVDAALL LERLRDQLPTRWQVAEQLPSAAWIQWRREIEQLAKGLKTLQTGANSSS" gene 2423207..2423683 /locus_tag="B565_2156" /db_xref="GeneID:10488073" CDS 2423207..2423683 /locus_tag="B565_2156" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392808.1" /db_xref="GI:330829856" /db_xref="GeneID:10488073" /translation="MANQTPRSTAKDSALHRLLPLMLPLLILTGCARQEPVNETLPIL NQLREQQLAEQPQLQLQYQNAETQLPADQEQQLHQFLGRKDPARIALVSGPGLQTDML ESARMASVRLTALTRLLGSRAIELEPRYDPMLAPNTLLIRILPNGEPGSVTPAAAQ" gene complement(2423661..2424107) /locus_tag="B565_2157" /db_xref="GeneID:10488074" CDS complement(2423661..2424107) /locus_tag="B565_2157" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392809.1" /db_xref="GI:330829857" /db_xref="GeneID:10488074" /translation="MHLSRGYLLLLLVALLSAAAMGWRYQNRAVNEGAKPMLLELVQL GWRLRVATPVLGGTYVSYQLAHPRCDGLLQAMLVAPDREAMSVTLAGEGMSQGVMFLG ELHQSPPLLSYRLTQGWRKLWGLAPYPLYRVALPTSCIDLIAPPLG" gene complement(2424094..2424861) /locus_tag="B565_2158" /db_xref="GeneID:10488075" CDS complement(2424094..2424861) /locus_tag="B565_2158" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392810.1" /db_xref="GI:330829858" /db_xref="GeneID:10488075" /translation="MEIRPWQWAPNWLLLGLANQWGMVWLNMGHFNLLVVLLIAIWWQ IASRVAPSWRPHPLALALFILLILIPSASCKALACLLLVASLWRRHQSGDERAVLQIV LAFTVAVLWGQQVFALLSGPVLALDAWGVGQWLQLLGWETRLDGNRIERLGGHALIVL KGCSSFSQLYLVVLSWLVSCCWLAPERPLYRQWPMLLLVCLLYIGANQLRLVLMSLDL RWYGWLHTGSLAQLYQWAIMLLVMTILFIRGRRDASI" gene 2425029..2425874 /locus_tag="B565_2159" /db_xref="GeneID:10488076" CDS 2425029..2425874 /locus_tag="B565_2159" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392811.1" /db_xref="GI:330829859" /db_xref="GeneID:10488076" /translation="MKLKPLAGLLGMLLVTSPAYALTEVDTELQLLMDVSGSVSSSEF NLQLQGYVDAFYSQDVQSAILDTSGDKLGSIAVQMVMWSGSTQQSVMTDWFHLYDMTS INNFAATLDALVRPYAGMTAPGSAMAFGAQQFDTNNYTAARQVMDVSGDGIQNNGLDT STVRDQLLTSGIDTINGITIGQDYADGVLQEWYVENVAGGQDAFVINATTFADFGNAL ELKLAAEIEGGIIPEGALAAPIEEIPLAAQLLLGMPLLLAWRYQRRHQGRLQPANRQL APAIG" misc_feature 2425098..2425712 /locus_tag="B565_2159" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cl00057" /db_xref="CDD:197401" gene complement(2427088..2427813) /locus_tag="B565_2160" /db_xref="GeneID:10488077" CDS complement(2427088..2427813) /locus_tag="B565_2160" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392812.1" /db_xref="GI:330829860" /db_xref="GeneID:10488077" /translation="MMKKMWYACACVTFLVLTLYFVQFVIYEIPMFSNKQGDWGSFGS YASGTLGPLFAFLAYIGIREQVSQQRDVITEQQKQKALDDHLNRTKETFEKIYIHSCS SIAPLERYCKISLANFTKFELSRKLSDIDTLVIIDDIIDAGRLLHGAEFVYKNYLHLI EQSVEHLDIECPLHEHKWVATTTWRGFQKNAMFINVLAQKAIRDVINPNQDMFSHEQS ELLTYISACERWEKNWKQLGLGF" gene complement(2428180..2429595) /locus_tag="B565_2161" /db_xref="GeneID:10488078" CDS complement(2428180..2429595) /locus_tag="B565_2161" /codon_start=1 /transl_table=11 /product="Chain length regulator" /protein_id="YP_004392813.1" /db_xref="GI:330829861" /db_xref="GeneID:10488078" /translation="MPVQFYYNLYIILFAAWRRRYLLVIPVLVMPLVGVTVGLLTPKE YESRTTFMVPQDANQTPTLKDLITQESLKDRFAVLEALLRSRYVLDGVARDRGLVNDE TPPAQRDAIMDWLSSAVSLRLIGDEVIEIKVKADSAANSAGLLEAISRRFFFNLLSKG RQSAESSERFLQSQLDSRRSELQAAEQLLADFKREHASALPQQQSTNVARLYGLQERY AESLITLQQAKARVDQLSLGQESQLARQLDEKLQLMRTELVLLRARYSDEHSKVQSLR YQIDQLQQEFEQLKSQPDMARGPEWQLAQTQLTEAEQNAAGLKSQLDGLDKVVDSQGD TERQLAELERDLAVKRTLYQDLLLRYEKAKVTGDLGNFEQGERIKVIDKPFAPSKPSN YPLWLFLLAGIVGGLGLGCGLALVAELADASLRRSDQLAALVKAPVLSRIPYCEPVPD YPSHSDHALDGQVLPLSPEPG" misc_feature complement(2428264..2429553) /locus_tag="B565_2161" /note="polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; Region: pepcterm_ChnLen; TIGR03007" /db_xref="CDD:163099" gene 2429846..2430868 /locus_tag="B565_2162" /db_xref="GeneID:10488079" CDS 2429846..2430868 /locus_tag="B565_2162" /codon_start=1 /transl_table=11 /product="glycosyltransferase" /protein_id="YP_004392814.1" /db_xref="GI:330829862" /db_xref="GeneID:10488079" /translation="MVLNLTQASPAEQPVHIISLEGRKGDVLRAWPALHPFAGNIHCL EKPAGWSLATLWRLTRLLRQLKPVAVHTHHLGPMLYGGLASRLAQVPTLVHTEHDAWY LDDPHQRTLAQWGLRAFKPILVADATPVANQLLAKLGQLSPTVIPNGIDELRFAPGAA ALARQEMGLPQGVKLIGCAARLESVKGHTLLLEAIRALPQEVHLALAGVGSLQNALQQ QCQQLGIAHRVHFLGLVENMPRFYQGLDLFCLPSLAEGMPLCVLEAQACGVPVVMSDV GAAREIVCQASGHILSGRDPDRLAQLLAQGLLHCHSLRAVTREFVCQQSSLSRMAQAY QQLYSR" misc_feature 2429846..2430859 /locus_tag="B565_2162" /note="Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate...; Region: Glycosyltransferase_GTB_type; cl10013" /db_xref="CDD:186885" gene 2430900..2432093 /locus_tag="B565_2163" /db_xref="GeneID:10488080" CDS 2430900..2432093 /locus_tag="B565_2163" /codon_start=1 /transl_table=11 /product="glycosyltransferase" /protein_id="YP_004392815.1" /db_xref="GI:330829863" /db_xref="GeneID:10488080" /translation="MEWIMIVFWLCAVLVVYHHVGYPLLLKFGGRQARKVANPPRPLD RGFKTDATDEALPTITLLMPVYNEAATIAAKLQNLASLDYPADKLWVHVHFDGCSDNS YPIALSQLGDPALQQLQIRLFDHPRNRGKVAVLNEAMTRVHSDLVALTDVSALLPIDS LLLAVAHFADPKVGVVGEAYRFWQPGSQGEESYWHYQSQIKLCESALGGMLGAHGAFY MMRRECLTPLAADTINDDFILPMQAIAKGYRAVYDNRCAALELEISDAALEATRRKRI GAGNTQQLLRLLPLLHPKFGWIAFNFASGKGLRVLMPLCLTLLWLCAIPLATQSLLFQ LLLGLQLLGYLLVILIQLTPVHPWPNLFRKIHYLVLGHWYNGMGTLRYCLRAPIRFMS QEKAV" misc_feature 2430951..2431748 /locus_tag="B565_2163" /note="CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; Region: CESA_like_1; cd06439" /db_xref="CDD:133061" misc_feature 2431350..2431358 /locus_tag="B565_2163" /note="DXD motif; other site" /db_xref="CDD:133061" gene 2432090..2432725 /locus_tag="B565_2164" /db_xref="GeneID:10488081" CDS 2432090..2432725 /locus_tag="B565_2164" /codon_start=1 /transl_table=11 /product="sugar transferase involved in lipopolysaccharide synthesis" /protein_id="YP_004392816.1" /db_xref="GI:330829864" /db_xref="GeneID:10488081" /translation="MTHPIPRLTLVVKRSMDLLGATLGLLLTLPLWPLIMLAIRLDSP GPVFFRQLRIGRSHATYTELFFMIKFRTMRADAEAATGPVWCGKGDSRITRSGDFLRK TRLDELPQFINVLKGEMSLIGPRPERPGIANRLEDAVPYFIERTYEVAPGITGLAQVN QGYDESLDDVRSKLAFDLAYSVALLHPWRWLVQDMHIIGKTIAIMVGKKGR" misc_feature 2432126..2432722 /locus_tag="B565_2164" /note="Bacterial sugar transferase; Region: Bac_transf; cl00939" /db_xref="CDD:193981" gene complement(2433018..2434019) /locus_tag="B565_2165" /db_xref="GeneID:10488082" CDS complement(2433018..2434019) /locus_tag="B565_2165" /codon_start=1 /transl_table=11 /product="glycosyltransferase" /protein_id="YP_004392817.1" /db_xref="GI:330829865" /db_xref="GeneID:10488082" /translation="MLPMQQIWLAIDARQVGGIEVHIIHLANDLLARGFRPTIVLVSN HGMTPFTTLLKQQGLPYEVCQNSRDFMRRLARQPASVLIHTHGYKAGVLGRLTAWFTG KSVVSTFHSGDDGEGLLKFYSWLDRTTARFAKCIAVSEPIARKLPVPSTVISNFVPMP ATPATVTGNRIAFVGRLSPEKGPEAFCQLAAFCPDGAFHLYGDGPMKSALLQQYGDRV QLHGFQNMANEWHNIDLLCITSRFEGLPLVALEAMAHGIPVCTFAVGGLVNLIDHKSN GWLVEPGHVRDMAELVNYWLRSDGVVRSKMSQAARNTIARGYSVNNRVTDILAVYGA" misc_feature complement(2433027..2434001) /locus_tag="B565_2165" /note="Glycosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaG; COG0438" /db_xref="CDD:30787" misc_feature complement(2433027..2433974) /locus_tag="B565_2165" /note="This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to...; Region: GT1_YqgM_like; cd03801" /db_xref="CDD:99974" gene complement(2434100..2435590) /locus_tag="B565_2166" /db_xref="GeneID:10488083" CDS complement(2434100..2435590) /locus_tag="B565_2166" /codon_start=1 /transl_table=11 /product="two-component response regulator, sigma factor PP2C-like phosphatase" /protein_id="YP_004392818.1" /db_xref="GI:330829866" /db_xref="GeneID:10488083" /translation="MDDWLRSAPATLQAVRELRNRLAQGLSLFQVSPKDQANWLLCFS ELATNSVKHTAPPATRLWLTLKEDETGLSLILEDDGGPQPGLASAPLPDELQEGGYGL ALVHQLFAEVHFSRDGERNRVTLRQQGPVNQLPVIAVIDDDKVMRALLTAYLHEHYRV ESYADSHAALLALGKQPPALVLSDIEMEGIDGFGLRQQLMKDPKMKGVPFIFLTGHQD QWTQSRAGALGIDDFLVKPITKQDLLLAVSRVLQRSQQLKSQWGEQLDQRMTSALRPL LPATSIGGYQLALQTRAATVGGGDFLLVKDRVLWLGDVMGHDAEAKFFAHAYAGYLRG LLTAHDLERAPARLLTILSNAVHSDPLLGATLLTTLCIELGNEGRVQWASAGHPAPWL VGPGTIRQVGVTGPLPGLRPDPHFVTNERQLKPGEILLFWTDGLLDSRDAAERQRWES QLKEICLTSGPGLEQLAHRIARWFDERINDAALDDMTLLLVACPGA" misc_feature complement(2435213..2435566) /locus_tag="B565_2166" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cl00075" /db_xref="CDD:193644" misc_feature complement(2434850..2435182) /locus_tag="B565_2166" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature complement(2434838..2435176) /locus_tag="B565_2166" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(2434880..2434885,2434892..2434894, 2434949..2434951,2435015..2435017,2435039..2435041, 2435165..2435170)) /locus_tag="B565_2166" /note="active site" /db_xref="CDD:29071" misc_feature complement(2435039..2435041) /locus_tag="B565_2166" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(2435015..2435023,2435027..2435032)) /locus_tag="B565_2166" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(2434877..2434885) /locus_tag="B565_2166" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(2434175..2434714) /locus_tag="B565_2166" /note="Sigma factor PP2C-like phosphatases; Region: PP2C_SIG; smart00331" /db_xref="CDD:128626" misc_feature complement(2434118..2434660) /locus_tag="B565_2166" /note="Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence...; Region: PP2Cc; cl00120" /db_xref="CDD:193664" gene complement(2435614..2436282) /locus_tag="B565_2167" /db_xref="GeneID:10488084" CDS complement(2435614..2436282) /locus_tag="B565_2167" /codon_start=1 /transl_table=11 /product="capsular polysaccharide biosynthesis protein" /protein_id="YP_004392819.1" /db_xref="GI:330829867" /db_xref="GeneID:10488084" /translation="MSIPIQYLELESLYAATVARGIRSLAVTSSEGGEGVSSICDALA RRSEADGLRTLLVDLNLYHPGRATAVAWGPNDVPEPVATGRSLSLLQAPGKDLMAFRN KDTLRQLLVRWLEHYDVVIFDTSPLTALNRGNIPADQVCGACEGALLVVLAGVTPTTV VQSAVDKLTRAEANLIGAVYNDKLNPGLASEILRELNRLPSNRVTEWLKRWCRRSALL NFRI" misc_feature complement(2435737..>2436216) /locus_tag="B565_2167" /note="ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]; Region: Mrp; COG0489" /db_xref="CDD:30835" gene complement(2436284..2438389) /locus_tag="B565_2168" /db_xref="GeneID:10488085" CDS complement(2436284..2438389) /locus_tag="B565_2168" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="YP_004392820.1" /db_xref="GI:330829868" /db_xref="GeneID:10488085" /translation="MKRGALEGLICVLLLLFTCPLLASTLLAPGDRLAIVQPGEPAFD QPFQINKQGEIALPEVGNLVVGGKTLQQADELIRTALKPVYNNLSQLTVTLLEKRLLI SVMGYVKKPGSYDLAPDGNVQMALDAAGGLVPGAQLNNMQVRRGSTVSSFDYKRYLDT GDASVLPPLQSLDVVFVPASPLIGNVQIDFDAATLAAGGDGDTGKAIKVFGEVNSPGA FSFKSGNSIVDLLMRAGGVTRFAGVERIRVINGDAPELFDLKAYLDSGNNKLLPNLAP GATIFVPKDEEQIKRGARTIYIMGEVFKPGAYEGREGDSFLDILANAGGPTRYAESRQ IRLLRTDGTIEPIDLQAYTEGMQKALPQVKPGDAIFVPEKTDINEKSWLKVAPGRAVM VMGAVRIPGRYEWSDEMSLLDLIAHAGGPNERADIAKVQILTAEGGQATPTLFDLDKF LHQGGALASLPKIRAGFTIMIPELPTDPSDNKSQWVRQSPDSSIYIFGQVGAPGRYAF NEQMGFIDILSAADGPTAAADLRNVRIAHRSGSTARVSKLDLALYFETGDETLLPKVL PGDSIYLPEKNRPWLDEPKENTIRVLGAIARPGRYRFDSSMTLLDLLAEAGGPTSSAY IKKIVVINMATSGQGDQARSFDLDGFAKEPDFSQLPVLRAGDTVFIPDSKSSNWAIFM DGMRDILTTISVVALVGTL" misc_feature complement(2437844..>2438308) /locus_tag="B565_2168" /note="Periplasmic protein involved in polysaccharide export, contains SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis]; Region: Wza; COG1596" /db_xref="CDD:31784" misc_feature complement(2438099..2438308) /locus_tag="B565_2168" /note="Polysaccharide biosynthesis/export protein; Region: Poly_export; pfam02563" /db_xref="CDD:145609" misc_feature complement(2437271..>2437771) /locus_tag="B565_2168" /note="polysaccharide export protein EpsE; Region: EpsE; TIGR03028" /db_xref="CDD:132073" misc_feature complement(2437346..2437507) /locus_tag="B565_2168" /note="SLBB domain; Region: SLBB; pfam10531" /db_xref="CDD:192616" misc_feature complement(2436956..>2437243) /locus_tag="B565_2168" /note="Periplasmic protein involved in polysaccharide export, contains SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis]; Region: Wza; COG1596" /db_xref="CDD:31784" misc_feature complement(2436530..>2436934) /locus_tag="B565_2168" /note="polysaccharide export protein EpsE; Region: EpsE; TIGR03028" /db_xref="CDD:132073" misc_feature complement(2436359..>2436649) /locus_tag="B565_2168" /note="Periplasmic protein involved in polysaccharide export, contains SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis]; Region: Wza; COG1596" /db_xref="CDD:31784" misc_feature complement(<2436518..2436628) /locus_tag="B565_2168" /note="SLBB domain; Region: SLBB; pfam10531" /db_xref="CDD:192616" gene complement(2438408..2438824) /locus_tag="B565_2169" /db_xref="GeneID:10488086" CDS complement(2438408..2438824) /locus_tag="B565_2169" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392821.1" /db_xref="GI:330829869" /db_xref="GeneID:10488086" /translation="MKRFGILLSSILLSGCAQWPPEGYGGMAEARPTRIPVNEDERRV WSRYDERQKELDLQLTELKQASLQGCMPAELKRLQSQRIDIERDMHGRLWSDVAWRQT VLAQSLQQVRLRLQQTTADGCRADWSGLPLRQWGQT" gene complement(2438821..2439171) /locus_tag="B565_2170" /db_xref="GeneID:10488087" CDS complement(2438821..2439171) /locus_tag="B565_2170" /codon_start=1 /transl_table=11 /product="anti-sigma factor antagonist" /protein_id="YP_004392822.1" /db_xref="GI:330829870" /db_xref="GeneID:10488087" /translation="MESMTYTLNDIQVVVLENEFDAMAVSELRPLFETLSTHPGDILA DISDVHFIDSSGIGALVFLYKRLIMNGHQMALVCGPGQPHDLLEMLHIDRVIPCHESI KAYMRSRGMMATAS" misc_feature complement(2438872..2439159) /locus_tag="B565_2170" /note="Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation; Region: STAS_anti-anti-sigma_factors; cd07043" /db_xref="CDD:132914" misc_feature complement(order(2438896..2438898,2438902..2438907, 2438917..2438919,2438983..2438988,2438995..2439003, 2439007..2439015,2439019..2439021,2439085..2439087, 2439103..2439111,2439115..2439117)) /locus_tag="B565_2170" /note="anti sigma factor interaction site; other site" /db_xref="CDD:132914" misc_feature complement(2439010..2439012) /locus_tag="B565_2170" /note="regulatory phosphorylation site [posttranslational modification]; other site" /db_xref="CDD:132914" gene 2439510..2440001 /locus_tag="B565_2171" /db_xref="GeneID:10488088" CDS 2439510..2440001 /locus_tag="B565_2171" /codon_start=1 /transl_table=11 /product="oxidoreductase molybdopterin binding protein" /protein_id="YP_004392823.1" /db_xref="GI:330829871" /db_xref="GeneID:10488088" /translation="MKAGLYIAPLLAALCGTAYAAPSPDSAVLKVEGAISSPTHQALA LWDSAMLDQLPVHEIKTHTPWYDEAKTFRGPLLQDVLAKVGATGKQLTITALNDYSVQ VPTSDAEQYRVILARTINGKPLSVRDKGPLFLVYPFDQYPELQNKLYYGRAIWQISAI KVE" misc_feature 2439576..>2439920 /locus_tag="B565_2171" /note="Sulfite oxidase (SO) family, molybdopterin binding domain. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). SO catalyzes the...; Region: SO_family_Moco; cl00199" /db_xref="CDD:185822" gene 2440010..2441836 /locus_tag="B565_2172" /db_xref="GeneID:10488089" CDS 2440010..2441836 /locus_tag="B565_2172" /codon_start=1 /transl_table=11 /product="response regulator receiver" /protein_id="YP_004392824.1" /db_xref="GI:330829872" /db_xref="GeneID:10488089" /translation="MRSMAASQRFLFVVLCVLLLAFAGIGTIQYRQFQDLQRSTSQGE DNVMWNYFQLYNEALRFQSSLLHESQPTFQLRYDILVSRMDLVLESKDRSLLQQTEIY QQASKAIRSYISLADIWLGPEATKPLDNLAHQELRQQLASLLPQLHQLTLEVNQQATL FDVARRDSVREQIITTTLIATLQFALLFVLALLIWRQMNISFLQHKLMQQLNDKLLRA NQAAEAGTRAKSSFLANMSHEIRTPMNGILGMLSLLADRDMDPRERDYLETARESANH LLGLLNDILDVSKLEEGKIELQLAPHHLPQLLEDIRALMQSNCDAKGIKLTLTVAPDT PEWLMIDPLRVRQILFNLVSNAIKFTHQGEVNIRVDSTLLEQDRHSIRISIQDTGIGM SKSQLKNLFQRFAQADVSITRQYGGSGLGLEISRNLARLMGGDISVESSEGHGSTFTY IWPARATTPSIVCLPSKPLDQESYRILLVDDNATNRKVIGAMLDSVGHQVTLAVQGEE ALEKLGHTEFDLVLMDVQMPVMDGLVATTRIRTSQMPWADIPIIALTADAMPESKQYY LSHGMNGYITKPINKETLLSEINRHISHGRLKYNAAMRVTKQ" misc_feature 2440688..2440876 /locus_tag="B565_2172" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature order(2440703..2440705,2440715..2440717,2440727..2440729, 2440736..2440738,2440748..2440750,2440757..2440759, 2440805..2440807,2440817..2440819,2440826..2440828, 2440838..2440840,2440847..2440849,2440859..2440861) /locus_tag="B565_2172" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature 2440721..2440723 /locus_tag="B565_2172" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature 2441042..2441356 /locus_tag="B565_2172" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(2441060..2441062,2441072..2441074,2441081..2441083, 2441162..2441164,2441168..2441170,2441174..2441176, 2441180..2441185,2441264..2441275,2441321..2441323, 2441327..2441329,2441342..2441347,2441351..2441353) /locus_tag="B565_2172" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 2441072..2441074 /locus_tag="B565_2172" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(2441174..2441176,2441180..2441182,2441264..2441266, 2441270..2441272) /locus_tag="B565_2172" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature 2441435..2441776 /locus_tag="B565_2172" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature 2441438..2441785 /locus_tag="B565_2172" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(2441447..2441452,2441579..2441581,2441603..2441605, 2441672..2441674,2441729..2441731,2441738..2441743) /locus_tag="B565_2172" /note="active site" /db_xref="CDD:29071" misc_feature 2441579..2441581 /locus_tag="B565_2172" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(2441588..2441593,2441597..2441605) /locus_tag="B565_2172" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 2441738..2441746 /locus_tag="B565_2172" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" gene complement(2442050..2442943) /locus_tag="B565_2173" /db_xref="GeneID:10488090" CDS complement(2442050..2442943) /locus_tag="B565_2173" /codon_start=1 /transl_table=11 /product="LysR-like transcriptional regulator" /protein_id="YP_004392825.1" /db_xref="GI:330829873" /db_xref="GeneID:10488090" /translation="MNKMTGRENYNDLHVFMLVAREGSFTKAAARLELAQSGVSRTIR DLEARLGVQLLMRTTRSLSLTQAGEQLYRTAQGCFQSLDAGLATLAHYRDTPSGTVRI NASQHAIDKVLLPKLTIFRQRYPDIRLELISESRFVNIIDERFDAGVRLGDEVDEGMV AVRITPDLEMVMVATPDHFLQYGFPQAPADLAGHPCIAYQFADGSLYQWELWQEGKAI KHRPQGQWVFSDSYMEAAAAKMGLGLAYVPEELVSDELERGILIQVLKPYSHRLAGLY LYYPHRNVSPALRVVIDALKT" misc_feature complement(2442056..2442919) /locus_tag="B565_2173" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature complement(2442737..2442913) /locus_tag="B565_2173" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(2442059..2442658) /locus_tag="B565_2173" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold; Region: PBP2_CrgA_like_5; cd08474" /db_xref="CDD:176163" misc_feature complement(order(2442119..2442121,2442200..2442202, 2442251..2442253,2442440..2442442,2442449..2442451, 2442491..2442493,2442608..2442610,2442620..2442622)) /locus_tag="B565_2173" /note="putative effector binding pocket; other site" /db_xref="CDD:176163" misc_feature complement(order(2442224..2442226,2442233..2442238, 2442257..2442271,2442359..2442361,2442545..2442565, 2442569..2442571,2442581..2442583,2442590..2442595, 2442599..2442604,2442614..2442619)) /locus_tag="B565_2173" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176163" gene 2443143..2444279 /locus_tag="B565_2174" /db_xref="GeneID:10488091" CDS 2443143..2444279 /locus_tag="B565_2174" /codon_start=1 /transl_table=11 /product="alpha/beta fold family hydrolase" /protein_id="YP_004392826.1" /db_xref="GI:330829874" /db_xref="GeneID:10488091" /translation="MNVLPKKLTAIASTLLLGAALTGVSTLSHAQTTNPTEPVSMVTQ WDKTFTQSDKVDHRKVTFKNRYGITLVADLYLPKNRGDAKLAAIALSGPFGAVKEQSS GLYAQTLAERGFVTLAFDPSYTGESGGQPRDVASPDINTEDFSAAVDFLGLQKEVDRN RIGLLGICGWGGMALNAAAGDTRIKAVATSVMYDMSRAMGHGVGDGKDRFSTADRRAV LAYLNEQRWKDAESGTYAHSNHDLYVDDKGNVTAAARTLPEVLPENPHPVLKEFFNYY RVPRGFHARSVNSNGAWTTTMPLSFMNMPLLSYASEISIPTLIVTGEQAHSRYFAEDA FKAVGSKQKELVVVPGANHVDLYDNQAGKIPFAKFEQFFKTNMK" misc_feature 2443263..2444276 /locus_tag="B565_2174" /note="Hydrolases of the alpha/beta superfamily [General function prediction only]; Region: COG1073" /db_xref="CDD:31271" misc_feature 2443458..>2443745 /locus_tag="B565_2174" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" gene 2444461..2444811 /locus_tag="B565_2175" /db_xref="GeneID:10488092" CDS 2444461..2444811 /locus_tag="B565_2175" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392827.1" /db_xref="GI:330829875" /db_xref="GeneID:10488092" /translation="MNIKMTIAGQIITATLEESHSTREFFAMLPLALPLEDYADTEKI AYLPRKLTTQGAPKGIDPNVGDLTYYAPWGNLAIFYRDFGYSTGLIKLGRIESGLSHL TTTSAASITIEAIE" misc_feature <2444461..2444766 /locus_tag="B565_2175" /note="Domain of unknown function (DUF369); Region: DUF369; cl00950" /db_xref="CDD:154105" gene 2444839..2446032 /locus_tag="B565_2176" /db_xref="GeneID:10488093" CDS 2444839..2446032 /locus_tag="B565_2176" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="YP_004392828.1" /db_xref="GI:330829876" /db_xref="GeneID:10488093" /translation="MNVTSLSSHTPAVVNEHWSAVAAMSLCVALLIAAEFMPVSLLTP IATDLGASNGMAGLAIAISGLFAVPTSLLIAPLSHRLDRRHVLMGLAVVMLTSLIVIA LSPNFTVLMVARALLGIVIGGFWALATATIMRLVSSQSVPKALGILYTGNAVATAFAA PIGSYLGGLIGWRGVFWLLVPLVVINLLWMVLCLPSMHSQARPHSAFRLMRRPNVAIA IMGVTLTFAGAFSAFTYFRPFLETRTQVDLPQLSALLLALGLAGFVGTTAVSMLLRRH LYRMLRWLPLVLGVITLALLAVEHHFWSVALMLILWGALNSAIPVAWSAWITQGISDS PESGGGLMVAAIQLAITLGAAVGGWLLDSLSIRATFMGSALLLTAASMVVGNGSRLRP VTLDQ" misc_feature 2444860..2445975 /locus_tag="B565_2176" /note="ribonucleoside transporter; Reviewed; Region: nepI; PRK10213" /db_xref="CDD:182309" misc_feature 2444899..2445990 /locus_tag="B565_2176" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature order(2444941..2444943,2444950..2444958,2444962..2444967, 2445016..2445018,2445025..2445030,2445037..2445039, 2445049..2445054,2445058..2445063,2445199..2445204, 2445211..2445216,2445223..2445228,2445235..2445237, 2445271..2445276,2445283..2445288,2445304..2445306, 2445514..2445516,2445523..2445528,2445535..2445540, 2445547..2445549,2445589..2445591,2445601..2445603, 2445613..2445615,2445622..2445624,2445634..2445636, 2445775..2445777,2445784..2445789,2445796..2445798, 2445808..2445813,2445820..2445822,2445850..2445855, 2445862..2445867,2445874..2445879,2445886..2445888) /locus_tag="B565_2176" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene complement(2446731..2447519) /locus_tag="B565_2177" /db_xref="GeneID:10488094" CDS complement(2446731..2447519) /locus_tag="B565_2177" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392829.1" /db_xref="GI:330829877" /db_xref="GeneID:10488094" /translation="MLFMGYLLLGAFAGMLAGLFGIGGGLIIVPVLVMTFRAQGIDPE IITHLALGTSLPTMIFTGFSSLRAHREAGAVDWVMIRRLGAGMLIGGWLGGMTANLLS TSTLNIIIGCFAWSMALQMGLNLKPTAERHMPGPLGTGIAGTIIGWMSALFGIGGGSL TVPYLSWNSVPMRNAVAASAACSMPIALAGSLSYLYAGWDHADLPEWSVGYIYLPALL GIVLTSTQFARIGAKLAHRLSPTRLKQAFALLMLLVGAKFMLFS" misc_feature complement(2446740..2447378) /locus_tag="B565_2177" /note="Predicted permeases [General function prediction only]; Region: COG0730; cl00498" /db_xref="CDD:186038" gene complement(2447626..2449062) /locus_tag="B565_2178" /db_xref="GeneID:10488095" CDS complement(2447626..2449062) /locus_tag="B565_2178" /codon_start=1 /transl_table=11 /product="arginine/ornithine antiporter" /protein_id="YP_004392830.1" /db_xref="GI:330829878" /db_xref="GeneID:10488095" /translation="MDKKLGLGALISLVIGSMVGAGVFSLPQNIAAHASAGAVALGWA ITGLGMICLALVYQNLSMRRPDLDGGIFSYAKAGFGDFIGFNAAWGYWLCQLLANVSY AIVVFSALSYFFDTPDNVIFGDGNTPVAITLASILIWSVHALVLRGVQVAALVNIVTT IAKMVPLIVFCVAILLAFNMDTFTLDIWGQNNMELGSVMDQVKSTMKVTLWVFIGIEG AVVVSARARHRKDVGRATVLALLGALTLYVMVTLFSLGVMSQPQLAALKNPSTAMILE AVVGPWGAWLINIGLVVSVMGALLSWTVLAAEVPYIAGKTGVFPGWFAKENKNGSPQV SLWCSTCLVQIFLIIIYFQSSTYLALVNIATSAALVPYVFSGAYGLKLALKGETYQDQ PHQRKRDLLLALVATVYGCWLVYAAGVEYLLLVALLYSPGIFIYWKARQHHGLRGLNR LEQGMTAALLGCAVLAFYKVMDGTIPLH" misc_feature complement(2447632..2449056) /locus_tag="B565_2178" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" misc_feature complement(2447683..2449044) /locus_tag="B565_2178" /note="Amino acid transporters [Amino acid transport and metabolism]; Region: PotE; COG0531" /db_xref="CDD:30877" gene complement(2449421..2450200) /locus_tag="B565_2179" /db_xref="GeneID:10488096" CDS complement(2449421..2450200) /locus_tag="B565_2179" /codon_start=1 /transl_table=11 /product="Short-chain dehydrogenase/reductase SDR" /protein_id="YP_004392831.1" /db_xref="GI:330829879" /db_xref="GeneID:10488096" /translation="MDIKDKVIVITGAGRGLGRAIALALGAQGATLALLDINRADLEA TAAMIHSQNGQCDQDSQCELFVCNVASEAEVEAVFAAIKERFGVLHGLINCAGILRDG MLIKVKEGELVEKMTLAQWQSVIDVNLTGTFLCGREGAALMAQEGQGGVIINISSIAR AGNIGQSNYAASKAGVASLVVTWARELARHGIRVMGIAPGVFATDMTAAMKPEAMARM QQAIPVGTLGEAQQLAETVSFIFANDYLSGRMIELDGGLRL" misc_feature complement(2449430..2450095) /locus_tag="B565_2179" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(order(2449595..2449606,2449682..2449684, 2449694..2449696,2449730..2449738,2449910..2449918, 2450087..2450095)) /locus_tag="B565_2179" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature complement(order(2449682..2449684,2449694..2449696, 2449730..2449732,2449817..2449819)) /locus_tag="B565_2179" /note="active site" /db_xref="CDD:187535" gene complement(2450253..2451155) /locus_tag="B565_2180" /db_xref="GeneID:10488097" CDS complement(2450253..2451155) /locus_tag="B565_2180" /codon_start=1 /transl_table=11 /product="3-hydroxyisobutyrate dehydrogenase" /protein_id="YP_004392832.1" /db_xref="GI:330829880" /db_xref="GeneID:10488097" /translation="MTRIGFIGLGNMGGPMAANLAGAGHTVQVFDLVAQNIERAIAAG CIAAGDAREAVTGCEVVISMLPAGEHVRDLWLSEGQDLLAALPVGALVIDCSTIDVDS ARQVGEAARARGLRFIDAPVSGGVAGAAAGTLTFIVGGDGADFESAKPLLACMGQNLF HAGTLGAGQIAKMCNNMLLAIHMAGTAEALALGVKEGLDPAVLSTIMGKSSGNNWSLE RYNPWPGVMENVPAARNYQGGFMTRLMVKDLGLAMALAEHGHSAVPMGALARNLFNLH AAQGQGGRDFSSIVELYLDKQDPA" misc_feature complement(<2450628..2451149) /locus_tag="B565_2180" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(2450277..2451140) /locus_tag="B565_2180" /note="3-hydroxyisobutyrate dehydrogenase; Region: HIBADH; TIGR01692" /db_xref="CDD:130753" gene complement(2451207..2452319) /locus_tag="B565_2181" /db_xref="GeneID:10488098" CDS complement(2451207..2452319) /locus_tag="B565_2181" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /protein_id="YP_004392833.1" /db_xref="GI:330829881" /db_xref="GeneID:10488098" /translation="MSEPVKVSCYPTEDGHQIGVLTLDSPASLNALSLPMIQILQQTL TRWEQDPAIVCVLLQGAGEKAFCAGGDIRSFYYRKQEASGSELFEYARDFFEQEYRLD HHIHSYRKPLICVADGICMGGGIGLFAGADFRVVTERSLFAMPEVTIGLYPDVGASWF LSRMPGRLGLWLGLTGARFNGSDAIGLGLADHAIASGEHSALLSHLAVLDWTGSGDPR EQIDLLLRGLHREVAARLPAPVLLPHQQRIDALLAGRTLQGVLARLFEAQFDEQETVL QQAQQLCRTGSPISRAILWRQYWQARRNSLAEVFAEELTLSVNCVLKGDFVEGVRALL IDKDKDPRWQRLPPEGEWLDEFYRWPQGRNPLACKE" misc_feature complement(2451726..2452286) /locus_tag="B565_2181" /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase...; Region: crotonase-like; cd06558" /db_xref="CDD:119339" misc_feature complement(2451288..2452274) /locus_tag="B565_2181" /note="3-hydroxyisobutyryl-CoA hydrolase; Provisional; Region: PRK05617" /db_xref="CDD:180165" misc_feature complement(order(2451873..2451875,2451882..2451887, 2451951..2451959,2451963..2451965,2452104..2452118, 2452128..2452130,2452227..2452229,2452233..2452235)) /locus_tag="B565_2181" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(2451951..2451953,2452110..2452112)) /locus_tag="B565_2181" /note="oxyanion hole (OAH) forming residues; other site" /db_xref="CDD:119339" misc_feature complement(order(2451747..2451749,2451756..2451758, 2451789..2451791,2451798..2451803,2451807..2451812, 2451816..2451821,2451831..2451836,2451840..2451848, 2451852..2451854,2451870..2451881,2451915..2451926, 2451987..2451989,2452011..2452013)) /locus_tag="B565_2181" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene complement(2452338..2453216) /locus_tag="B565_2182" /db_xref="GeneID:10488099" CDS complement(2452338..2453216) /locus_tag="B565_2182" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase family protein" /protein_id="YP_004392834.1" /db_xref="GI:330829882" /db_xref="GeneID:10488099" /translation="MHHAGFGFVSQPQVGVIQACHHGGSFIDKDNVMTRIRLEYHGHV AYITLDHPPANTWTLASLQAFLQMMVELDSRPDVVALVIRGAGDKFFCAGADLNMFVE GNVELAREVAEAFGKAFEALARFHGVSIAAINGYAMGGGLEVALACDIRIAEQQALLG LPEASVGLLPCAGGTQRLTELVGPGWAKRMILCGEKVSASLAYEMGLVEEVVKTGQAW EAAHQMAHLVERQSPSALRACKTLINQGRSGPRDAALPLERSLFLDLFSDANQREGVA AFLEKRLPRWQYGPTK" misc_feature complement(2452350..2453120) /locus_tag="B565_2182" /note="enoyl-CoA hydratase; Provisional; Region: PRK09076" /db_xref="CDD:181639" misc_feature complement(2452539..2453111) /locus_tag="B565_2182" /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase...; Region: crotonase-like; cd06558" /db_xref="CDD:119339" misc_feature complement(order(2452719..2452721,2452728..2452733, 2452797..2452805,2452809..2452811,2452926..2452940, 2452950..2452952,2453049..2453051)) /locus_tag="B565_2182" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(2452797..2452799,2452932..2452934)) /locus_tag="B565_2182" /note="oxyanion hole (OAH) forming residues; other site" /db_xref="CDD:119339" misc_feature complement(order(2452545..2452547,2452590..2452592, 2452599..2452601,2452632..2452634,2452641..2452646, 2452650..2452655,2452659..2452664,2452677..2452682, 2452686..2452694,2452698..2452700,2452716..2452727, 2452761..2452772,2452833..2452835,2452857..2452859)) /locus_tag="B565_2182" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene complement(2453256..2454413) /locus_tag="B565_2183" /db_xref="GeneID:10488100" CDS complement(2453256..2454413) /locus_tag="B565_2183" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase family member 8" /protein_id="YP_004392835.1" /db_xref="GI:330829883" /db_xref="GeneID:10488100" /translation="MDFTLTDDQQAYVEAAAAFADEALKPHAARWDKEHEFPIPTIKQ AAGLGFCGLYTPEPFGGLGLPRLDASLIFERLAMGCTSTTAYLTIHNMVSWMLGNWLP TEVAKEWVPKLASGELLGSYCLTEPGAGSDAAALKTRAVREGDCYLIEGTKVFISGAG SSDVLVVMARTGGEGAKGISAFMVPANAPGVSYGKAEEKMGWNSQPTREVVFNGVRIP ASYRLGEEGEGFKFAMQALDGGRINIATCSVGTAQQALDDALAYVQQRQQFGHPISEF QSVQFRLADMATELAAARLLVRQAADKLDRGAPDKSAWCAMAKRFATDVGYRICDEAL QLFGGYGYIREYPLERYLRDTRVHRILEGTNEVMRLIIARRMLADPGLTLG" misc_feature complement(2453271..2454413) /locus_tag="B565_2183" /note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region: CaiA; COG1960" /db_xref="CDD:32143" misc_feature complement(2453280..2454344) /locus_tag="B565_2183" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:195931" misc_feature complement(order(2453316..2453318,2453322..2453324, 2453328..2453336,2453943..2453945,2453949..2453951, 2454042..2454044,2454048..2454050,2454138..2454140)) /locus_tag="B565_2183" /note="active site" /db_xref="CDD:173838" gene 2454720..2455862 /locus_tag="B565_2184" /db_xref="GeneID:10488101" CDS 2454720..2455862 /locus_tag="B565_2184" /codon_start=1 /transl_table=11 /product="Isovaleryl-CoA dehydrogenase 2" /protein_id="YP_004392836.1" /db_xref="GI:330829884" /db_xref="GeneID:10488101" /translation="MQMDETLNALTEQVAAFCQKVIAPRASEIDQSNAFPRDLWPRMG ELGLHGITVAEEYDGVNLGYLAHVLVMEQVSRASASVGLSYGAHSNLCINQIHRHGTA EQKARYLPPLVSGEHVGALAMSEPGAGSDVVSMRLTAEREGDHFVLNGNKMWITNGPD ADTFVIYAKTDTSAGPKGISAFIVEAGTPGFSTAQKLDKLGMRGSSTCELVFDNCRVP QENLLGTLHGGVKVLMSGLDYERVVLAAGPLGIMQACMDVVLPYVRERKQFGQAIGEF QLVQGKLADMYTRLASSRALVYSVASACDQGHTSRKDCAAAILFAAENATQMALDAIQ LLGGNGYINEYPTGRLLRDAKLYEIGAGTSEIRRWLIGRELMGENA" misc_feature 2454726..2455847 /locus_tag="B565_2184" /note="Isovaleryl-CoA dehydrogenase; Region: IVD; cd01156" /db_xref="CDD:173845" misc_feature 2454729..2455853 /locus_tag="B565_2184" /note="isovaleryl-CoA dehydrogenase; Region: PLN02519" /db_xref="CDD:178134" misc_feature order(2454966..2454968,2454978..2454980,2454990..2454992, 2455107..2455109,2455185..2455187,2455248..2455250, 2455410..2455412,2455431..2455433,2455440..2455442, 2455449..2455451,2455785..2455790,2455797..2455805) /locus_tag="B565_2184" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:173845" misc_feature order(2455080..2455082,2455086..2455091,2455104..2455109, 2455179..2455181,2455185..2455187,2455806..2455808, 2455812..2455814) /locus_tag="B565_2184" /note="FAD binding site [chemical binding]; other site" /db_xref="CDD:173845" misc_feature 2455437..2455439 /locus_tag="B565_2184" /note="catalytic base [active]" /db_xref="CDD:173845" gene 2455859..2457460 /locus_tag="B565_2185" /db_xref="GeneID:10488102" CDS 2455859..2457460 /locus_tag="B565_2185" /codon_start=1 /transl_table=11 /product="acetyl/propionyl-CoA carboxylase,carboxyltransferase subunit" /protein_id="YP_004392837.1" /db_xref="GI:330829885" /db_xref="GeneID:10488102" /translation="MSRIHSRLDTASPEYAANRAAMQGLVDDLHARIAEIAQGGGAAN NARHQARGKLLPRERINQLLDPGSPFLELSALAGWQVYDEPVPAAGIITGIGRVSGRL CMLVVNDATVKGGTYYPLTVKKHLRAQAIAERLRLPCLYLVDSGGAFLPMQDEVFPDR DHFGRIFYNQARMSAQNIPQLAVVMGLCTAGGAYVPAMADESIMVREQATIFLAGPPL VKAATGEEISAEALGGAEVHCAHSGVADHMARDDAHALAIARTLVTHLGNEPIESSPG YEPPCYPIEELYGLVGTSLKRPYDARELIARLVDSSDFDEFKALFGTTLVTGFARICG MEVGLLANNGVLHSDSAQKGAHFIQLCNRRAIPLLFLQNITGFMVGSSAEKEGIAKHG AKLVTAVACSRVPKITLIIGGSFGAGNYGMCGRAYEPDFLFSWPNSRISVMGGEQAAG VLVQVRRDKLTAEGKDLSEQEAAAIRAPVIEQYERQGHPYYASARLWDDGVIDPAQSR TVLALALAACQGARAEPEQYGIFRM" misc_feature 2455880..2457457 /locus_tag="B565_2185" /note="3-methylcrotonyl-CoA carboxylase, beta chain; Region: PLN02820" /db_xref="CDD:178415" misc_feature <2456129..>2456557 /locus_tag="B565_2185" /note="Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; Region: ACCA; cl00513" /db_xref="CDD:189112" misc_feature <2456744..>2457214 /locus_tag="B565_2185" /note="Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; Region: ACCA; cl00513" /db_xref="CDD:189112" gene 2457547..2458326 /locus_tag="B565_2186" /db_xref="GeneID:10488103" CDS 2457547..2458326 /locus_tag="B565_2186" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /protein_id="YP_004392838.1" /db_xref="GI:330829886" /db_xref="GeneID:10488103" /translation="MAELVLSRPARHNAFDADLMLGLLDCLDDLAHLHGHDLAERPHA LLLRAEGKHFCAGADLNWMRNLAHADFEHNREDARVLARLMQTLDELPFPTVALVQGA AYGGALGLICACDLVLASDDARFCLSEVSLGLVPAVISPYVVRAMGMRQARRYMLSAE PFDAITACRLNVAHQLCKPDQLLAEGRAQALRLCRNGPEAMKETKRLLAAIEAHPSRL HEEKTVETIARVRVGLEAQEGMQAFFDKRPPAWRPRFKDET" misc_feature 2457550..2458308 /locus_tag="B565_2186" /note="enoyl-CoA hydratase; Provisional; Region: PRK05995" /db_xref="CDD:180345" misc_feature 2457550..2458125 /locus_tag="B565_2186" /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase...; Region: crotonase-like; cd06558" /db_xref="CDD:119339" misc_feature order(2457580..2457582,2457586..2457588,2457700..2457702, 2457712..2457726,2457850..2457852,2457856..2457864, 2457928..2457933,2457940..2457942) /locus_tag="B565_2186" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature order(2457718..2457720,2457862..2457864) /locus_tag="B565_2186" /note="oxyanion hole (OAH) forming residues; other site" /db_xref="CDD:119339" misc_feature order(2457802..2457804,2457826..2457828,2457889..2457900, 2457934..2457945,2457958..2457960,2457964..2457972, 2457976..2457981,2457994..2457999,2458003..2458008, 2458012..2458017,2458024..2458026,2458057..2458059, 2458066..2458068,2458111..2458113,2458120..2458125) /locus_tag="B565_2186" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene 2458323..2460293 /locus_tag="B565_2187" /db_xref="GeneID:10488104" CDS 2458323..2460293 /locus_tag="B565_2187" /codon_start=1 /transl_table=11 /product="methylcrotonoyl-CoA carboxylase alpha chain" /protein_id="YP_004392839.1" /db_xref="GI:330829887" /db_xref="GeneID:10488104" /translation="MTHHTQIKRLLIANRGEIAVRIIKTAKRLGIHTIALYSDADAHA MHTRLADEAWHLGPAPARESYLDTGKVLKIAKEARADAIHPGYGFLSENSDFATACEQ RGLRFVGPSGAAILAMGDKSGAKALMQAAGVPVLPGYHGTDQRPDFLRDQASQIGFPL LIKAASGGGGKGMRRVDQLADFDESLAAVKREAKAAFGDDLVLLERYLTQARHVEVQV FADSLGNAIYLGDRDCSLQRRHQKVIEEAPAPDIPPALRRAMGDAAVAAAKAIHYQGA GTIEFLLCKDEFFFMEMNTRLQVEHPVTEAVTGQDLVAWQLAVAEGKPLPLTQEEVVL RGHAVEARLYAEDVAAGFLPASGPIHWLHWPVGVRIDTGVTAGDEVSPYYDPMIAKLI AHGQNRAEAFAKLADALAALDLGPLVHNGPLLLRLCEEPDVLAMGHHTQWPIPTTARP IPELAWPLAALWLASRPAGTSPWQQACGFRLGPDRCWTAAVRIGDEHRVLTLNDHGGQ FEWQGETHCYQKGDDNIRLQQGGCWQQLPIQTVSGSEAAFIMTLAGLRIRFAADDRQH SHHHDQTNEKAQGAIAPMHGIVVAVMIEPGQTVSKGQPLLVLEAMKMEHQLRAERDGV IEALQCKQGEQVSQGTVLVRFAEETASQEEHP" misc_feature 2458341..2460263 /locus_tag="B565_2187" /note="Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]; Region: COG4770" /db_xref="CDD:34383" misc_feature 2458341..2458664 /locus_tag="B565_2187" /note="Carbamoyl-phosphate synthase L chain, N-terminal domain; Region: CPSase_L_chain; pfam00289" /db_xref="CDD:189488" misc_feature 2458680..2459306 /locus_tag="B565_2187" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" misc_feature 2459340..2459648 /locus_tag="B565_2187" /note="Biotin carboxylase C-terminal domain; Region: Biotin_carb_C; cl08365" /db_xref="CDD:195719" misc_feature 2460066..2460257 /locus_tag="B565_2187" /note="The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase...; Region: biotinyl_domain; cd06850" /db_xref="CDD:133459" misc_feature order(2460126..2460128,2460153..2460161,2460180..2460182) /locus_tag="B565_2187" /note="carboxyltransferase (CT) interaction site; other site" /db_xref="CDD:133459" misc_feature 2460156..2460158 /locus_tag="B565_2187" /note="biotinylation site [posttranslational modification]; other site" /db_xref="CDD:133459" gene 2460290..2461258 /locus_tag="B565_2188" /db_xref="GeneID:10488105" CDS 2460290..2461258 /locus_tag="B565_2188" /codon_start=1 /transl_table=11 /product="hydroxymethylglutaryl-CoA lyase" /protein_id="YP_004392840.1" /db_xref="GI:330829888" /db_xref="GeneID:10488105" /translation="MNRSQDVRDDRVSLVEMGPRDGLQNEAAPLSLVQRLELIQRLTD SGLQRIEVGAFVSAKKVPQMADSAALFEALPRKGSTRYGALVPNLQGLQAAIAARADE IGLFTACSDGFTRANIGISVEESLVRFAPLVQEARRLGIKVRGYLSTVIACPFDGPTR PKRVAAMAEQLLDLGCHEISLGDTIGVGTPGTVAPMLDAVLHEIPAGRLAVHFHDTYG QGLANLLPALERGIRTIDCSVAGLGGCPYAPGASGNVASEEVVYLLHGLGMTTGVDLD KLAATGQWVSEQLGRANGSRVGQALHANAERLRARLCEPHAQQQES" misc_feature 2460329..2461150 /locus_tag="B565_2188" /note="3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain; Region: DRE_TIM_HMGL; cd07938" /db_xref="CDD:163676" misc_feature order(2460347..2460352,2460359..2460361,2460449..2460451, 2460455..2460457,2460605..2460607,2460923..2460925, 2460929..2460931,2461049..2461051) /locus_tag="B565_2188" /note="active site" /db_xref="CDD:163676" misc_feature order(2460347..2460352,2460440..2460442) /locus_tag="B565_2188" /note="catalytic residues [active]" /db_xref="CDD:163676" misc_feature order(2460350..2460352,2460923..2460925,2460929..2460931, 2461049..2461051) /locus_tag="B565_2188" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163676" gene 2461261..2461671 /locus_tag="B565_2189" /db_xref="GeneID:10488106" CDS 2461261..2461671 /locus_tag="B565_2189" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="YP_004392841.1" /db_xref="GI:330829889" /db_xref="GeneID:10488106" /translation="MSRSLPGKEITYSISELAHEFDVTPRTIRYYEDEGLLTPQREGQ TRIYSHRDKIRLKLTLRGKRLGFSLAEIRELFDMYDTDKSSKTQLHSMIQLIEAKRGA LRQQLEDIQMVMAELEAAEQRCVNSLNSLKTGAD" misc_feature 2461294..2461644 /locus_tag="B565_2189" /note="Helix-Turn-Helix DNA binding domain of the regulatory protein GnyR; Region: HTH_GnyR; cd04776" /db_xref="CDD:133403" misc_feature 2461294..2461644 /locus_tag="B565_2189" /note="Predicted transcriptional regulators [Transcription]; Region: SoxR; COG0789" /db_xref="CDD:31132" misc_feature order(2461297..2461305,2461345..2461347,2461393..2461401) /locus_tag="B565_2189" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133403" misc_feature order(2461432..2461434,2461441..2461443,2461453..2461458, 2461483..2461485,2461546..2461548,2461558..2461560, 2461576..2461578,2461588..2461590,2461597..2461602) /locus_tag="B565_2189" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:133403" gene 2461735..2462469 /locus_tag="B565_2190" /db_xref="GeneID:10488107" CDS 2461735..2462469 /locus_tag="B565_2190" /codon_start=1 /transl_table=11 /product="ABC transporter periplasmic binding protein" /protein_id="YP_004392842.1" /db_xref="GI:330829890" /db_xref="GeneID:10488107" /translation="MFSLSGWSHPLIKVGGYPYAPFVIKLPDSRYEGLTLELIDQLNA VQKEVTFVFVPTSAVNRYKALDLGRFSLMLFEDTKWGWDTDKFKMTAPFLGGGEVYVA LRKTGRDQHFFDDPASHHLIGVTGYHYGVGQFKADPLYLQRKLNITLVKDNVSALQAL LKGRGEVAILNVSYLNQYLQANPDTADQLLISQKWDQQYQHRAILHPEAPITPAQLEQ WLAALQQKGELDRLWTKYGVQQHATP" misc_feature 2461768..2462445 /locus_tag="B565_2190" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature 2461768..2462442 /locus_tag="B565_2190" /note="Bacterial periplasmic substrate-binding proteins; Region: PBPb; smart00062" /db_xref="CDD:128376" misc_feature order(2461789..2461791,2461906..2461908,2461981..2461983, 2462116..2462118,2462245..2462247) /locus_tag="B565_2190" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(2462194..2462196,2462206..2462208,2462224..2462226) /locus_tag="B565_2190" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 2462323..2462340 /locus_tag="B565_2190" /note="hinge residues; other site" /db_xref="CDD:29040" gene 2462522..2465524 /locus_tag="B565_2191" /db_xref="GeneID:10488108" CDS 2462522..2465524 /locus_tag="B565_2191" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392843.1" /db_xref="GI:330829891" /db_xref="GeneID:10488108" /translation="MNTTEPASPKLRLLRYLAYAFLLLLILITLLLWQTPRLVQRYLP GWLSEHYGLQLTLGEIDVGLRNPSLTLGATALLDAKQQPIIRFEQLFITPNLQASWQQ KGVVLSAVTLTKPVVLLQRLTDKKGDVRLNLTDALATLLAPAPSPEPETASAPLLIDI ASVNVTDGHVRYQDQRKESEPGWLPPLNLEKVTLKLDNLRTEANHPTAYQLSAAINGK SSLAAHGKLDVMSGMGQGKASLKQVELKPFAPLWAPYLKLDLAKGHANAEVQYQLKEG KQGVLWQLSKGKLTLDNWQLKKHKGDEFARFGQLALSDLAVDGQKQSLQIGKVTLQQP LLKATLNPQQELDLADLLIEQAPAKPVKGAHAANEVANNAAPKSAQQAKTAGNGKKHA PDKPWQWQIKQILIDKGDLTLIESSSGKPQARQLSGLKLALGPLGSKGEQPSKLTLAT QFNQSSPLAFDGQLTLTPFTLSGDINQQGLPLTLAQPYLADLVRIKVQNGLLSSKTRL DLATTAQGDLSKLTLQGGLDINGLKVVDRADNQRLLEFNTLALTGLTYDGISQQMRIK DIALNKPFARIEINEDGTTNLQQLLLPQPAATNSTHATAGSKTPDFRFTIDQLRTEQG NLRFADRSLSQDFVADIASLGGQSRHISNIPGQRSDLAFNGKVDRYAPVTIRGGTNLL VANPILDIAVAFHNLELTTFTPYSGTYAGYAIDKGQLSMKLHYKLEGNRLEGDNDITI KKLQLGEKIKSDQAKDLPLGLAIALLSDANGVIQMNLKVKGDLDQPDFSIGNIFWDVL GNTLSKAITSPFSLLASLADGTEDLDELPFLPGEPDLTPTQQEKLVKLAQALKDRPKL SMNIRGKVNFNEERPILQRQKLERVLAKLTGNQADLDLLEQDPALQEALAQAYEERFG EDLDDLADRLHLDEESAALRAQAVILLRDQQLITAKSLRNLAMRRAQNTKEFLVDSQG IAPERLFVLDSQVKEEDKEAKVILTLDQ" misc_feature 2462993..2463457 /locus_tag="B565_2191" /note="Domain of Unknown Function (DUF748); Region: DUF748; pfam05359" /db_xref="CDD:191261" misc_feature 2463710..2464174 /locus_tag="B565_2191" /note="Domain of Unknown Function (DUF748); Region: DUF748; pfam05359" /db_xref="CDD:191261" misc_feature 2464355..2464798 /locus_tag="B565_2191" /note="Domain of Unknown Function (DUF748); Region: DUF748; pfam05359" /db_xref="CDD:191261" gene 2465749..2466345 /locus_tag="B565_2192" /db_xref="GeneID:10488109" CDS 2465749..2466345 /locus_tag="B565_2192" /codon_start=1 /transl_table=11 /product="YaaH" /protein_id="YP_004392844.1" /db_xref="GI:330829892" /db_xref="GeneID:10488109" /translation="MSEKLANPAPLGLMGFGMTTILLNIHNAGFFPISAMILAMGLCY GGIAQIIAGIMEYKRGNTFGVTAFTSYGLFWLSLVFLLIMPTMGLAEATPHAYMGWYL LMWGMFTLFMLVGTINYPRAKQFVFASLTVLFFLLAARDFTGSTLIGTIAGFEGIICG ASAIYLAMATVINEQFGRTVMPIGDHKKAAAVQLKAAA" misc_feature 2465752..2466303 /locus_tag="B565_2192" /note="GPR1/FUN34/yaaH family; Region: Grp1_Fun34_YaaH; cl00685" /db_xref="CDD:193908" gene complement(2466427..2467236) /locus_tag="B565_2193" /db_xref="GeneID:10488110" CDS complement(2466427..2467236) /locus_tag="B565_2193" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392845.1" /db_xref="GI:330829893" /db_xref="GeneID:10488110" /translation="MLGWFKWLGGRPQTPMSDDEMALWRQGLAAVPILQGLSDAEQTT LIGLGQQLLKRKTLTLIGVELSHRQQAVLALQAALPILHLGLDWYRGFHEIIIIPEPV TRRQEVQDEFGLVSEFEEENAGESWPQGPLVLAWSELQQDGDWDGFNLVIHELAHKLD MLGGEADGAPPLPGPMSSQLWQQAFQAAFDELCQQLDRDEVTAIDPYAAEHPAEFFAV SCECFFTDPLRLQQVYPAVYRQLSQFFSQDPAQRFPATRLLAGEVDVKSLS" misc_feature complement(2466502..2467173) /locus_tag="B565_2193" /note="Phosphoenolpyruvate:glucose-phosphotransferase regulator; Region: MtfA; cl01267" /db_xref="CDD:186408" gene complement(2467268..2467717) /locus_tag="B565_2194" /db_xref="GeneID:10488111" CDS complement(2467268..2467717) /locus_tag="B565_2194" /codon_start=1 /transl_table=11 /product="GCN5-like N-acetyltransferase" /protein_id="YP_004392846.1" /db_xref="GI:330829894" /db_xref="GeneID:10488111" /translation="MRPTMKNDPETLTIRPPEVDDGSAIAHLFAQLGYPAEGADVTAR LLTPDPASVVLLASLGDKVVGVLVWHKLAPLHVAPAWGLISALVVDEGARGAGVGAAL LKGAEAMARAAGCAQLELSSSLKREAAHRFYLAQDYQERPKRFVKLL" misc_feature complement(2467271..2467681) /locus_tag="B565_2194" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene 2468054..2469553 /locus_tag="B565_2195" /db_xref="GeneID:10488112" CDS 2468054..2469553 /locus_tag="B565_2195" /codon_start=1 /transl_table=11 /product="alanine symporter family protein" /protein_id="YP_004392847.1" /db_xref="GI:330829895" /db_xref="GeneID:10488112" /translation="MNEIVNAINGVIWSPALIYLCLGVGLYFSLRTRFLQLRHIKEMV RLMFDGKSTDAGVSSFQALAMTLAGRVGTGNIAGVATAITFGGPGALFWMWMVAFLGA SSAFVESTLGQVYKEKINGEYRGGPAFYIEKGLGMKWYAWTFAIATVFACGVLLPGVQ ANSIGSSLQTAFNIDPNVTAAGLALLLGFIIFGGVKRIASFASTVVPFMALGYIIVAC VIIALNIGQLPGVILLIWKSAFGLDAGFGAILGLAIMWGVKRGVYSNEAGQGTGPHAS SAAAVSHPAKQGLVQAFSVYIDTLFVCSATGFMLLITGLYNVQGPDGAAIYTGIAGIA AGPGYVQTAMESMMPGFGSIFVAIALFFFAFTTIVAYYYIAETNIAYINRKINRPWLT FLLKIALMAATVYGTVKTADLAWGMGDIGVGLMAWLNIIAILLLQKTAFTCLKDYEAQ QAQGIDPVFHPEKLGIKNADYWVGKRSEENLELEKSGHQFEPDQDRKTS" misc_feature 2468054..2469421 /locus_tag="B565_2195" /note="Sodium:alanine symporter family; Region: Na_Ala_symp; cl00548" /db_xref="CDD:163871" gene 2469679..2470422 /locus_tag="B565_2196" /db_xref="GeneID:10488113" CDS 2469679..2470422 /locus_tag="B565_2196" /codon_start=1 /transl_table=11 /product="putative IS4 transposase; KpLE2 phage-like element" /protein_id="YP_004392848.1" /db_xref="GI:330829896" /db_xref="GeneID:10488113" /translation="MRIAHALDFLHASNAAQFESLSDLIPPDLITTLLDEKGVATLRR RRMPMERLVWAIIGMAIFRHVPMTQLVNQLDILLPGDRPFVAPSAFLHARQKLGDKSI ERLFHETASLWHQQANHLGWAGLQLLAVDGVMWHTPDTPDNAAAFAKPGTRHGETAYP QVRMLCQMVGEQPQADRHVTQGCRTAALLGRNAEYGCEIRAIRVSAAPARVRRGEVML HLDDQLATRDMASNRSPKVWCGSVCYHWC" misc_feature 2469730..2469999 /locus_tag="B565_2196" /note="Insertion element 4 transposase N-terminal; Region: Nterm_IS4; pfam13006" /db_xref="CDD:193479" gene complement(2470874..2471809) /locus_tag="B565_2197" /db_xref="GeneID:10488114" CDS complement(2470874..2471809) /locus_tag="B565_2197" /codon_start=1 /transl_table=11 /product="acyltransferase-like protein" /protein_id="YP_004392849.1" /db_xref="GI:330829897" /db_xref="GeneID:10488114" /translation="MQNIAVVVFFILSGFVISYSLGRKSHRNDYGFLHYFVDRFVRIY TSFIPVLIFIVVIDLFNQSVNGGLYKYNEAFNIRTFIYNLFMLQDYPFINVATSFGSA RPLWTVAIEWWIYLFVGVLFFAFKNRSKNAFFYFFIVLLSIAPIYNLIGGRGNGLTLY WVYGVMIYYIYKYSILKGISLGKMFAMMVVITVMACYRVMDNLQEYDHLFALYLAGII ILLVEISTRFDFKNIVVRASTFLASYSYSLYLIHYSIFDLLVTHYGGGYTVFIVAFTM SNVISYFFGVLFEIHMAKKLKKSIYDIFHWEYKRQ" misc_feature complement(<2471144..2471800) /locus_tag="B565_2197" /note="Predicted acyltransferases [Lipid metabolism]; Region: COG1835" /db_xref="CDD:32020" gene complement(2472411..2473451) /locus_tag="B565_2198" /db_xref="GeneID:10488115" CDS complement(2472411..2473451) /locus_tag="B565_2198" /codon_start=1 /transl_table=11 /product="transposase IS116/IS110/IS902 family protein" /protein_id="YP_004392850.1" /db_xref="GI:330829898" /db_xref="GeneID:10488115" /translation="MNITTIGIDLAKSCIQVHCVDVHGKRILNKKLKREQVVPFFSNR PACLIGMEACGSAHFWANKLQALGHTVKLMAPQFVKPYVKTNKNDAADAEAICEAVSR PNMRFVPIKNSEQLAVLAMHRARQGFVKARTAQANQLRGLLAEHGIIIPKGIRHINQH LPDILEAGDNGLPGRFRQLLDRLSAHFKELDKQVRELDVQLQSWHQDSPASQKLAKIP GIGPLTASALVATIGDAKQFQNGRQLAAWLGLVPRQHSSGGKPTLLGISKRGDTYLRT LLIHGARAVLRVVKSKAQHAGSWLEGVMARRNHNVAAVAQANKTARIVWALLANDREF DAQYSTGTILAA" misc_feature complement(2472468..2473442) /locus_tag="B565_2198" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG3547" /db_xref="CDD:33349" misc_feature complement(2472987..2473262) /locus_tag="B565_2198" /note="Transposase; Region: DEDD_Tnp_IS110; pfam01548" /db_xref="CDD:190030" misc_feature complement(2472591..2472812) /locus_tag="B565_2198" /note="Transposase IS116/IS110/IS902 family; Region: Transposase_20; pfam02371" /db_xref="CDD:190292" gene complement(2473546..2474037) /locus_tag="B565_2199" /db_xref="GeneID:10488116" CDS complement(2473546..2474037) /locus_tag="B565_2199" /codon_start=1 /transl_table=11 /product="transposase, IS4 family protein" /protein_id="YP_004392851.1" /db_xref="GI:330829899" /db_xref="GeneID:10488116" /translation="MFGEGEWKVRKHGAEKRRVWRKLHLAVDPVAHDIVAAEVSLENV HDAEVLPTLLNPLRRKLGCVYADGAYDSKASHQLISRKGATACIPPRKNAGLWKKAHP RNEAVLVMRKEGLAYWKKISGYHRRSLAEAAMYRFKQLLAGKSACVTTTAKWEKSWRM SAP" misc_feature complement(2473615..2474010) /locus_tag="B565_2199" /note="Transposase DDE domain; Region: DDE_Tnp_1; pfam01609" /db_xref="CDD:144990" gene complement(2474027..2474416) /locus_tag="B565_2200" /db_xref="GeneID:10488117" CDS complement(2474027..2474416) /locus_tag="B565_2200" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="YP_004392852.1" /db_xref="GI:330829900" /db_xref="GeneID:10488117" /translation="MGTPLQPITNWPTYNKSLINRGSLTFWVDAEAMSNWFHHDHHGR RGRSQLYTDQSICTFLMLKGIFNLSLWATQGLFDSLLELMNVPLCAPDYSCVSKRART VKVAYRQPPQGAHYRPSYRLDGSESVW" gene complement(2474913..2475038) /locus_tag="B565_2201" /db_xref="GeneID:10488118" CDS complement(2474913..2475038) /locus_tag="B565_2201" /codon_start=1 /transl_table=11 /product="phage capsid portal protein" /protein_id="YP_004392853.1" /db_xref="GI:330829901" /db_xref="GeneID:10488118" /translation="MPPSARNEVLPLCELIQDAINSAGLSRSLWGYFQENIGWSE" misc_feature complement(2474925..>2475026) /locus_tag="B565_2201" /note="Phage-related protein [Function unknown]; Region: COG4695; cl01923" /db_xref="CDD:194210" gene 2475431..2475829 /locus_tag="B565_2202" /db_xref="GeneID:10488119" CDS 2475431..2475829 /locus_tag="B565_2202" /codon_start=1 /transl_table=11 /product="IS3 family transposase A" /protein_id="YP_004392854.1" /db_xref="GI:330829902" /db_xref="GeneID:10488119" /translation="MGQGVKRTQRDYSLTFKLALVEQIEKGELTYKQAQVRYGIQGRS TVLVWLRKHGRQDWSQGASVRAGRSITMPDPDNQTPEQRIKELEQQLALMSQKAQFFE AVVDVLKNDYGVSIVKKRPGKSSRSGKSRG" gene 2475826..2476449 /locus_tag="B565_2203" /db_xref="GeneID:10488120" CDS 2475826..2476449 /locus_tag="B565_2203" /codon_start=1 /transl_table=11 /product="IS3 family transposase B" /protein_id="YP_004392855.1" /db_xref="GI:330829903" /db_xref="GeneID:10488120" /translation="MTIVRACLFLGISRQAYYKRNRVADERHAQGLQVVRFVRQVRLR QPRVGTRKLHYLLQGQDDGGLKVGRDRLFRILAEHRLLVQPRRAYHKTTHSFHRFYRH PNLLKAGPEQVTPVAPEQVWVADITYLPARSGPLYLSLVTDGYDCYQNALAERVNGIL KGELLLQSPQDLMQAREMVREAVDIHNTERPHYALKYRTPDAVHRGF" misc_feature <2476015..>2476254 /locus_tag="B565_2203" /note="putative transposase OrfB; Reviewed; Region: PHA02517" /db_xref="CDD:177368" misc_feature <2476261..2476425 /locus_tag="B565_2203" /note="putative transposase OrfB; Reviewed; Region: PHA02517" /db_xref="CDD:177368" gene 2476901..2478001 /locus_tag="B565_2204" /db_xref="GeneID:10488121" CDS 2476901..2478001 /locus_tag="B565_2204" /codon_start=1 /transl_table=11 /product="acyltransferase 3" /protein_id="YP_004392856.1" /db_xref="GI:330829904" /db_xref="GeneID:10488121" /translation="MNRVNSIDYLRGLMAISILLYHFTSWTIGVPQSETILGRLGIYG VSIFYIVSGMSMYISYKSTSWTIKSTISFFIRRFARLAPVYWIAMFWLIFLTVASSSA GSPFLPFELSRIIYNATLTFGILEPKAYLVTGGWSIGNEVAFYLFFPLLMLTIKNNYL FATTNIAILCTYIYYGFFVIDSGATIGDEWFNYIDPLNQALLFSGGICIAYLSMTHSS RINNKWHIIMIATCALFFVLLPGSGNQISIITEWNRVFFTIVILALSYFTFNVNAEGL SIPEKIFKFLGDASYPVYLLHGVVFDTARIYIFPLLGDISPEAKLFFSLFVLVPFLIV ISYMTYKFIEMPIINSAKKITVIEKNILMQDK" misc_feature 2476901..2477959 /locus_tag="B565_2204" /note="Predicted acyltransferases [Lipid metabolism]; Region: COG1835" /db_xref="CDD:32020" gene complement(2478483..2479361) /locus_tag="B565_2205" /db_xref="GeneID:10488122" CDS complement(2478483..2479361) /locus_tag="B565_2205" /codon_start=1 /transl_table=11 /product="insertion element IS2 transposase InsD" /protein_id="YP_004392857.1" /db_xref="GI:330829905" /db_xref="GeneID:10488122" /translation="MDCACALVAGGRRLSAVSQALNVSRAQLSVRVHRKPGWQDGRHH RLYADAALLGRIMEAMAELPSYGYRRVWALLRRQSEATRQPVVNAKRVYRVMRDHGLL LERKPAAPLTQRAHKGRVAVKESNRRWCSDGFEFRCDNGEKLRVTFAMDCSDRETLDW AASTGSYDRATVQDVMLRSVERRFGDALPASPVEWLTDNGSAYRAHETRAFARELWLE PRTTAVRSPQSNGIAESFVKTMKRDYIEMMPKPDSRTAVGNFAIAFEYYNEHHPHSAL GYHSPREYLRSRVSQP" misc_feature complement(2478498..2479361) /locus_tag="B565_2205" /note="IS2 transposase TnpB; Reviewed; Region: PRK09409" /db_xref="CDD:181829" misc_feature complement(2478636..2478998) /locus_tag="B565_2205" /note="Integrase core domain; Region: rve; cl01316" /db_xref="CDD:194099" gene complement(2479319..2479633) /locus_tag="B565_2206" /db_xref="GeneID:10488123" CDS complement(2479319..2479633) /locus_tag="B565_2206" /codon_start=1 /transl_table=11 /product="IS2 transposase" /protein_id="YP_004392858.1" /db_xref="GI:330829906" /db_xref="GeneID:10488123" /translation="MISIVQQTFEPGMTVSHVARLHDVNANQLFKWRKQFQEGSLTAI TAGEDVVPASELAAAIKQIRDLQRLLGKKTMENEILRDAVEYGRAKKWIAHAPLLPGD DD" misc_feature complement(2479322..2479630) /locus_tag="B565_2206" /note="Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed...; Region: HTH_Hin_like; cl01116" /db_xref="CDD:186341" gene complement(2479879..2480298) /locus_tag="B565_2207" /db_xref="GeneID:10488124" CDS complement(2479879..2480298) /locus_tag="B565_2207" /codon_start=1 /transl_table=11 /product="phage capsid portal protein" /protein_id="YP_004392859.1" /db_xref="GI:330829907" /db_xref="GeneID:10488124" /translation="MPDYLGGLQSARLNQDATLFRRKYFLNGAHMGFIFYATDPNMDD DTEEEMKEMIASSKGVGNFRSMFVNILAGIIPTNGGGGLGDPEKYDATYARNEVLPLC ELIQDAINSAGLPSPCGSIFGRISVRLYKQTVFAVAR" misc_feature complement(2479954..>2480298) /locus_tag="B565_2207" /note="Phage-related protein [Function unknown]; Region: COG4695; cl01923" /db_xref="CDD:194210" gene complement(2480326..2481132) /locus_tag="B565_2208" /db_xref="GeneID:10488125" CDS complement(2480326..2481132) /locus_tag="B565_2208" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /protein_id="YP_004392860.1" /db_xref="GI:330829908" /db_xref="GeneID:10488125" /translation="MEKPRVKCEIHDGIAEVMLTRGDKLNALDRAMFSAIDETLTQLA LHKGLRAVILHGEGRAFCAGLDVKSMLRQPVAALDILKREADEATNLAQRVAYGWHQL PVPVIAVTQGVCFGGGLQIALGADFRFSTPDCRFSVMEIKWGIIPDMSGSVTMRNLMG LDTAMELAMSGRELDAVEAKALGMVSRVCADPLVEAREFARTLITKSPDALAGIKQLY SQAWARSDEAMLKEETRLQKQILGRPNQWRATLNSLFRWRLPFGPRRNPL" misc_feature complement(2480395..2481123) /locus_tag="B565_2208" /note="enoyl-CoA hydratase; Provisional; Region: PRK07509" /db_xref="CDD:181008" misc_feature complement(2480524..2481117) /locus_tag="B565_2208" /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase...; Region: crotonase-like; cd06558" /db_xref="CDD:119339" misc_feature complement(order(2480704..2480706,2480713..2480718, 2480782..2480790,2480794..2480796,2480932..2480946, 2480956..2480958,2481052..2481054,2481058..2481060)) /locus_tag="B565_2208" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(2480782..2480784,2480938..2480940)) /locus_tag="B565_2208" /note="oxyanion hole (OAH) forming residues; other site" /db_xref="CDD:119339" misc_feature complement(order(2480524..2480529,2480536..2480538, 2480575..2480577,2480584..2480586,2480617..2480619, 2480626..2480631,2480635..2480640,2480644..2480649, 2480662..2480667,2480671..2480679,2480683..2480685, 2480701..2480712,2480746..2480757,2480818..2480820, 2480842..2480844)) /locus_tag="B565_2208" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene 2481301..2483088 /locus_tag="B565_2209" /db_xref="GeneID:10488126" CDS 2481301..2483088 /locus_tag="B565_2209" /codon_start=1 /transl_table=11 /product="putative signal-transduction protein containing cAMP-binding and CBS domains" /protein_id="YP_004392861.1" /db_xref="GI:330829909" /db_xref="GeneID:10488126" /translation="MSTLFNFARPPFDRLDEEARERLSRHLSLCYFRAGDLLLKEGDE PPGLYLIIKGAVEESAPHHQFGDYGVDDLFDVRAQFDGRCRHRFTALEDSLCQLIPRH TFLSLCEQDPQFASYFTANLAERQRQQEQREQLGQKNLAEFILTRIEPGHLQAPLIVD SKLSLLAATEAMVSKGTDCLLYPTHDGSLTLATRKTLLHALTLKGLPLTAPLSVLTPT PLIGLPLESYLFDALLLMTRHRIKRLVVWRGNEVAGILQLTQVLGLFSTHSHVLTLRI ARADSLPALEAVAREQQQLTRSLFAQGIHTAFLMKLIATINEQLIAKAFALVIPPEVQ DKVCLLMLGSEGRGEQILKTDQDNALILPEGLTWPTQAADLAEFSALLERLGYPLCPG QVMVNNPAWVKTGSEWQSAIASASTTAKEDELLWLATLADAHPIAGDRQLHLPVARAL REQLADRRDLLAEMVRPAVAFHAPLTLFGRLEQPPEGLDLKRGGLFPLVHGIRMLALE AGILETSTLGRIDALVAADRLSADYGSNLAEAFRLFIRLRLRSQLKGGNSRVQTSELS HSERDLLRQALHQVKKFQQWLTLHFRLRQ" misc_feature 2481313..2483082 /locus_tag="B565_2209" /note="Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]; Region: COG2905" /db_xref="CDD:32729" misc_feature 2481331..2481654 /locus_tag="B565_2209" /note="effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO...; Region: CAP_ED; cd00038" /db_xref="CDD:28920" misc_feature order(2481523..2481528,2481553..2481561) /locus_tag="B565_2209" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:28920" misc_feature order(2481616..2481624,2481634..2481642) /locus_tag="B565_2209" /note="flexible hinge region; other site" /db_xref="CDD:28920" misc_feature 2481760..2482092 /locus_tag="B565_2209" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair; cl10010" /db_xref="CDD:99705" misc_feature 2482168..2482659 /locus_tag="B565_2209" /note="Nucleotidyltransferase (NT) domain of Escherichia coli adenylyltransferase (GlnE), Escherichia coli uridylyl transferase (GlnD), and similar proteins; Region: NT_GlnE_GlnD_like; cd05401" /db_xref="CDD:143391" misc_feature order(2482363..2482365,2482369..2482371,2482477..2482479) /locus_tag="B565_2209" /note="metal binding triad; other site" /db_xref="CDD:143391" misc_feature 2482672..2483073 /locus_tag="B565_2209" /note="Putative nucleotidyltransferase substrate binding domain; Region: DUF294_C; pfam10335" /db_xref="CDD:150931" gene 2483091..2483717 /locus_tag="B565_2210" /db_xref="GeneID:10488127" CDS 2483091..2483717 /locus_tag="B565_2210" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit epsilon" /protein_id="YP_004392862.1" /db_xref="GI:330829910" /db_xref="GeneID:10488127" /translation="MLNRVRRYWYGRAFRTGEFAPLFATPPKDEQVALDFETTSLDPE QAEIVSIGAVRIQGNRLLTGEALAIKVQPPASLTGQSVVIHGLRHQDLQQGMTLEAAL RLLLHFIGPRELVGYHVAYDLRILNLACQKLWELTLPQRGIEVSQLYHDHLYRRYPDA AIDLHLSAICSHLELPSLPAHDALADATTAALIYLRLTCGSPLAYPKV" misc_feature 2483184..2483633 /locus_tag="B565_2210" /note="DEDDh 3'-5' exonuclease domain family; Region: DEDDh; cd06127" /db_xref="CDD:176648" misc_feature order(2483193..2483204,2483208..2483210,2483439..2483444, 2483448..2483456,2483631..2483633) /locus_tag="B565_2210" /note="active site" /db_xref="CDD:176648" misc_feature order(2483193..2483204,2483208..2483210,2483439..2483444, 2483448..2483453,2483631..2483633) /locus_tag="B565_2210" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:176648" misc_feature order(2483193..2483195,2483199..2483201,2483454..2483456, 2483631..2483633) /locus_tag="B565_2210" /note="catalytic site [active]" /db_xref="CDD:176648" gene 2483823..2484134 /locus_tag="B565_2211" /db_xref="GeneID:10488128" CDS 2483823..2484134 /locus_tag="B565_2211" /codon_start=1 /transl_table=11 /product="putative inner membrane protein involved in acetate transport" /protein_id="YP_004392863.1" /db_xref="GI:330829911" /db_xref="GeneID:10488128" /translation="MEQQSYLRIQQDPNFQELVAKRQRFAWALSALMLGLYLAFILLI AFAPGWLGTPLSDSTTVTRGIPVGVGLILSSFVLTGIYVFRANGEFDELNQKILKGVQ S" misc_feature 2483847..2484122 /locus_tag="B565_2211" /note="Protein of unknown function, DUF485; Region: DUF485; cl01231" /db_xref="CDD:154280" gene 2484131..2485798 /locus_tag="B565_2212" /db_xref="GeneID:10488129" CDS 2484131..2485798 /locus_tag="B565_2212" /codon_start=1 /transl_table=11 /product="acetate permease ActP" /protein_id="YP_004392864.1" /db_xref="GI:330829912" /db_xref="GeneID:10488129" /translation="MSAKSMKGKWLLLASLASSPLLAADALTGEVQRQPLNVSAIVMF VVFVAATLFITYWASKRNRSASDYYAAGGRITGFQNGLAIAGDYMSAASFLGISALVY TSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLKQTAVRTLSACGSL VVVALYLIAQMVGAGKLIELLFGLQYHVAVVLVGILMVLYVLFGGMLATTWVQIIKAV MLLSGASFMAIMVMKSVNFDIGALFSEAVKVHEKGIAIMSPGGLVADPISAISLGLAL MFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFGAILLVSTNPAF KDATGALLGGTNMAAVHLANAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDL YASVLKKGKANETDELRVSKMTTLVLGVVAIGLGILFEKQNIAFMVGLAFSIAASCNF PVLFLSMFWSRLTTRGAVYGGWLGLVSAVTLMILGPTVWVKVLGHAQAIFPYEYPALF SMGLAFVGIWFFSITDSSQNAADEHAKFLPQFVRSQTGLGASGATSH" misc_feature 2484212..2485795 /locus_tag="B565_2212" /note="Sodium:solute symporter family; Region: SSF; cl00456" /db_xref="CDD:186007" misc_feature 2484227..2485771 /locus_tag="B565_2212" /note="Predicted symporter [General function prediction only]; Region: DhlC; COG4147" /db_xref="CDD:33899" gene 2485964..2487556 /locus_tag="B565_2213" /db_xref="GeneID:10488130" CDS 2485964..2487556 /locus_tag="B565_2213" /codon_start=1 /transl_table=11 /product="ABC transporter ATPase" /protein_id="YP_004392865.1" /db_xref="GI:330829913" /db_xref="GeneID:10488130" /translation="MLSSNNITMQFGAKPLFENINVKFGGGNRYGLIGANGCGKSTFM KILGGDLEPTGGNVSLDVNERIGKLRQDQFAYEDMRVLDVVMMGHTELWAAIAERDAI YANLEATDDDYMKAAELEGLVAEYDGYTAESRAGELLLGAGIPIEQHNGPMSEVAPGW KLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEQVLNERESTMIIISHDRHFLNSV CTHMADLDYGELRVYPGNYDDYMLAATQARERLLADNAKKKAQIADLQSFVSRFSANA SKSSQATSRLKQIDKIKIEEVKVSSRQNPFIRFEQEKKLYRNILEIEGLSKGYGEAPL FKGLNMMLEVGEKVAILGTNGIGKSTLIKTLVGDLAPDTGTIKWSENAQIGYYAQDHA EDFDTDLNVFDWMAQWKQENEDEQAVRSVLGRLLFSQDDIKKPVKVLSGGEQGRMLFG KLMMQRPNILIMDEPTNHLDMESIESLNLALEMYKGTLIFVSHDREFVSSLATRILEL SEDGIRDFGGTYEDYLRTQGVV" misc_feature 2485964..2487550 /locus_tag="B565_2213" /note="ABC transporter ATP-binding protein; Provisional; Region: PRK15064" /db_xref="CDD:185024" misc_feature 2485976..2486641 /locus_tag="B565_2213" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 2486063..2486086 /locus_tag="B565_2213" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(2486072..2486077,2486081..2486089,2486174..2486176, 2486501..2486506,2486591..2486593) /locus_tag="B565_2213" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 2486165..2486176 /locus_tag="B565_2213" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 2486429..2486458 /locus_tag="B565_2213" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 2486489..2486506 /locus_tag="B565_2213" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 2486513..2486524 /locus_tag="B565_2213" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 2486579..2486599 /locus_tag="B565_2213" /note="H-loop/switch region; other site" /db_xref="CDD:72971" misc_feature 2486630..2486890 /locus_tag="B565_2213" /note="ABC transporter; Region: ABC_tran_2; pfam12848" /db_xref="CDD:193322" misc_feature 2486921..2487499 /locus_tag="B565_2213" /note="ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by...; Region: ABCF_EF-3; cd03221" /db_xref="CDD:72980" gene complement(2487801..2489714) /locus_tag="B565_2214" /db_xref="GeneID:10488131" CDS complement(2487801..2489714) /locus_tag="B565_2214" /codon_start=1 /transl_table=11 /product="peptidylprolyl cis-trans isomerase D" /protein_id="YP_004392866.1" /db_xref="GI:330829914" /db_xref="GeneID:10488131" /translation="MMLDKLREGAQGKVAKVILGLIILSFALAGVGSYLNGPARTAPA TVNGTEISAAALENAYRNERARMESQMGEAFSQLAANPDYMKQFRRGVLDRLIDQALL DSKARELGLRISDEQIKQAIVAMPEFAENGKFNNDRYLQLIRRAGMTPEMFRDSLRQD MVRQQLMSALLGTEFSLKGEAEQLDKLYNQTRDLRLVRLAAANYMADVQVSDNELEQY YKTNGARFMNDEQVKVDYLLLDAANLAKDIKVTEQDAQDYYDQHQDLFQRAERRHVAH ILIPFGKDEKAAEQKAEAVLAKAKAGDDFAALAKADSSDTFSAKKGGELDWFEKGVMD PAFEKAAFALNKAGDLSTVVKSPFGFHIIKLLGVEAAQTKPFADVKEETITRLQADKA KEKFFAEQQKMADSSFENPDSLDLTADAMGMKVQSSDFFTQATAPAPLNDPKVLSVAF SEQLRDDNTNSDVIELADGKALVLHITGHKPKAVKPLAEVKEQVIAAIKHDKASEVAR GKAQGLLDKLKVGESITADLTALGLKVETHKGVARFDRELDQNLIAQAFTLPHPIDGK PSVALVAETNGDRVVVALDKVNVPAAASGMAAMLQAQLGQGKAQVDYKSLIDELRKAA KIEYFSSVEANVE" misc_feature complement(2487825..2489711) /locus_tag="B565_2214" /note="periplasmic folding chaperone; Provisional; Region: PRK10788" /db_xref="CDD:182731" misc_feature complement(2489217..2489585) /locus_tag="B565_2214" /note="SurA N-terminal domain; Region: SurA_N; pfam09312" /db_xref="CDD:150092" misc_feature complement(2488614..>2488808) /locus_tag="B565_2214" /note="PPIC-type PPIASE domain; Region: Rotamase; cl08278" /db_xref="CDD:195679" gene complement(2489865..2490137) /locus_tag="B565_2215" /db_xref="GeneID:10488132" CDS complement(2489865..2490137) /locus_tag="B565_2215" /codon_start=1 /transl_table=11 /product="histone-like DNA-binding protein" /protein_id="YP_004392867.1" /db_xref="GI:330829915" /db_xref="GeneID:10488132" /translation="MNKSQLIDKIADGADISKAAAGRALDAFIDAVGEALKEGDQVAL VGFGTFAVRERAARSGRNPQTGATIEIAAGKVPAFKAGKALKDAVN" misc_feature complement(2489874..2490134) /locus_tag="B565_2215" /note="Integration host factor (IHF) and HU are small heterodimeric members of the DNABII protein family that bind and bend DNA, functioning as architectural factors in many cellular processes including transcription, site-specific recombination, and higher-...; Region: HU_IHF; cd00591" /db_xref="CDD:29683" misc_feature complement(order(2489874..2489876,2489895..2489897, 2489901..2489903,2489913..2489918,2489982..2489984, 2489997..2490002,2490009..2490023,2490033..2490038, 2490045..2490050,2490057..2490059,2490099..2490101, 2490111..2490113,2490120..2490122,2490129..2490134)) /locus_tag="B565_2215" /note="IHF dimer interface [polypeptide binding]; other site" /db_xref="CDD:29683" misc_feature complement(order(2489889..2489891,2489898..2489900, 2489904..2489906,2489916..2489918,2489946..2489957, 2489964..2489966,2489970..2489975,2489979..2489981, 2489991..2489993,2490000..2490005,2490009..2490011, 2490015..2490017,2490060..2490062,2490126..2490134)) /locus_tag="B565_2215" /note="IHF - DNA interface [nucleotide binding]; other site" /db_xref="CDD:29683" gene complement(2490378..2492732) /locus_tag="B565_2216" /db_xref="GeneID:10488133" CDS complement(2490378..2492732) /locus_tag="B565_2216" /codon_start=1 /transl_table=11 /product="ATP-dependent protease La" /protein_id="YP_004392868.1" /db_xref="GI:330829916" /db_xref="GeneID:10488133" /translation="MNLERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM EQDKKVLLVAQKDASTDEPTVEEIFTVGTVANILQMLKLPDGTVKVLVEGGQRARLER MIDDKDFFVCEAQYIPSQAIEEKDQEVLVRSAIGQFEGYIKLNKKIPPEVLTSISAID DAARLADTMAAHMPLKLEDKQKVLEIVSVSERIEFLMAMMESEIDLLQVEKRIRTRVK KQMEKSQREYYLNEQMKAIQKELGELEDSPDEFEALNRKIEEAGMPEDAREKAQAELA KLKMMSPMSAEATVVRSYVDWMVQVPWKARSKVKKDLGKAQEVLDADHYGLEKVKDRI LEYLAVQARVNKLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIR GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNN SFNDHYLEVDYDLSDVMFVATSNSMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLVA KQIQRNGLKESEITIEDSALVGVIRYYTREAGVRSLEREISKICRKAVKRILLDKSIK HVQVNQENLKEFLGVQRFDYGKATDQNQVGQVCGLAWTEVGGDLLTIETTNMPGKGKL TYTGSLGDVMQESIQAAMTVVRARAEKLRINADFYEKRDIHVHVPEGATPKDGPSAGI AMCTALVSSLTGNPVRADVAMTGEITLRGEVLPIGGLKEKLLAAHRGGIKRVLIPKEN ERDLEEIPANVKQDLEIYPVRWIDEVLELALQDNPQGFERVSVV" misc_feature complement(2490384..2492732) /locus_tag="B565_2216" /note="DNA-binding ATP-dependent protease La; Provisional; Region: PRK10787" /db_xref="CDD:182730" misc_feature complement(2492127..2492705) /locus_tag="B565_2216" /note="Found in ATP-dependent protease La (LON); Region: LON; cl01056" /db_xref="CDD:141077" misc_feature complement(2491269..2491742) /locus_tag="B565_2216" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(2491644..2491667) /locus_tag="B565_2216" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(2491314..2491316,2491464..2491466, 2491641..2491664)) /locus_tag="B565_2216" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(2491461..2491478) /locus_tag="B565_2216" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(2491281..2491283) /locus_tag="B565_2216" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature complement(2490420..2491028) /locus_tag="B565_2216" /note="Lon protease (S16) C-terminal proteolytic domain; Region: Lon_C; pfam05362" /db_xref="CDD:191262" gene complement(2492874..2494148) /locus_tag="B565_2217" /db_xref="GeneID:10488134" CDS complement(2492874..2494148) /locus_tag="B565_2217" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease ATP-binding subunit clpX" /protein_id="YP_004392869.1" /db_xref="GI:330829917" /db_xref="GeneID:10488134" /translation="MTEKRKGEGDKLLYCSFCGKSQHEVRKLIAGPSVYICDECVELC NDIIREEIREISPKRDGNELPTPHQIRAHLDDYVIGQEYAKKVLAVAVYNHYKRLRNS GENSGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN IIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT IASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRSVKGTGIGFGAEVKS KDAKATLSETFAKVEPEDLIKYGLIPEFIGRLPVVATLTELDESALIQILKEPKNALT KQYAALFDLEGVELEFRDDALNAIARKAMERKTGARGLRSIVEAVLLDTMYDLPSLEG VSKVVIDETVIKGDSAPLMIYENPETQAAASE" misc_feature complement(2492898..2494139) /locus_tag="B565_2217" /note="ATP-dependent protease ATP-binding subunit ClpX; Provisional; Region: clpX; PRK05342" /db_xref="CDD:180029" misc_feature complement(2493996..2494112) /locus_tag="B565_2217" /note="ClpX C4-type zinc finger; Region: zf-C4_ClpX; pfam06689" /db_xref="CDD:148346" misc_feature complement(<2493564..2493914) /locus_tag="B565_2217" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(2493771..2493794) /locus_tag="B565_2217" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(2493597..2493599,2493768..2493791)) /locus_tag="B565_2217" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(2493594..2493611) /locus_tag="B565_2217" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(2492952..2493200) /locus_tag="B565_2217" /note="C-terminal, D2-small domain, of ClpB protein; Region: ClpB_D2-small; pfam10431" /db_xref="CDD:192583" gene complement(2494219..2494842) /locus_tag="B565_2218" /db_xref="GeneID:10488135" CDS complement(2494219..2494842) /locus_tag="B565_2218" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease proteolytic subunit" /protein_id="YP_004392870.1" /db_xref="GI:330829918" /db_xref="GeneID:10488135" /translation="MYKNYNDMTDSPSNALVPIVVEQTAKGERSYDIYSRLLKERVIF LTGQVEDHMANLVVAQLLFLESENPDKDIYIYINSPGGSVTAGMSIYDTMQFIKPDVS TVCMGQACSMGAFLLAGGAKGKRFCLPNARVMIHQPLGGFQGQASDIQIHAQEILKIK NTLNERLAFHTGQDMATIERDTDRDNFMSAEQAVAYGLVDGVLSQRS" misc_feature complement(2494237..2494749) /locus_tag="B565_2218" /note="Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease; Region: S14_ClpP_2; cd07017" /db_xref="CDD:132928" misc_feature complement(order(2494282..2494284,2494288..2494290, 2494357..2494359,2494363..2494365,2494369..2494371, 2494378..2494380,2494420..2494431,2494447..2494449, 2494453..2494455,2494519..2494521,2494543..2494545, 2494555..2494560,2494567..2494569,2494576..2494578, 2494588..2494590,2494609..2494611,2494654..2494656, 2494663..2494668,2494675..2494680,2494705..2494707, 2494711..2494713)) /locus_tag="B565_2218" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:132928" misc_feature complement(order(2494288..2494290,2494435..2494437, 2494510..2494512)) /locus_tag="B565_2218" /note="active site residues [active]" /db_xref="CDD:132928" gene complement(2494929..2496239) /locus_tag="B565_2219" /db_xref="GeneID:10488136" CDS complement(2494929..2496239) /locus_tag="B565_2219" /codon_start=1 /transl_table=11 /product="Trigger factor" /protein_id="YP_004392871.1" /db_xref="GI:330829919" /db_xref="GeneID:10488136" /translation="MQVSVETTQGLERRLTITVPAATVDAAVRKELNGLAKTRRIDGF RPGKAPVAIIKKMFGAMAHARVADEMMQSNFIKAIIENKLSPAGAPTMDPKEIKEGQD FEFTATFEVYPEFEVAGLETIKVEKPVATVKDEDLANMIDTLRKQHATWADADVAAAN GMRVTMDFVGSIDGEEFDGGKAEGFNLVLGAGRMIPGFEDAILGKKAGDEFTIEVTFP ADYHAENLKGKEAKFASKLIKVEEQILPELTEEFVKRFGIESGSVEELKAEVRKNMER ELAQALKNSVKEQVLNGLVEANQIDLPKAAVAQEIDALRQQALQRFGGFQGGNAPELP AELFQAQAERRVRVGLLLGDVIRTNEIKADDARVNSIIESMATAYEDPKEVIEYYQKN EQMLNGVRNLAVEDQAIDLILSKAQVTEKEVAFDEVINKSGAAA" misc_feature complement(2494950..2496239) /locus_tag="B565_2219" /note="trigger factor; Provisional; Region: tig; PRK01490" /db_xref="CDD:179299" misc_feature complement(2495517..2495762) /locus_tag="B565_2219" /note="FKBP-type peptidyl-prolyl cis-trans isomerase; Region: FKBP_C; cl11587" /db_xref="CDD:187101" misc_feature complement(2494998..2495456) /locus_tag="B565_2219" /note="Bacterial trigger factor protein (TF) C-terminus; Region: Trigger_C; pfam05698" /db_xref="CDD:191345" gene 2496681..2497115 /locus_tag="B565_2220" /db_xref="GeneID:10488137" CDS 2496681..2497115 /locus_tag="B565_2220" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392872.1" /db_xref="GI:330829920" /db_xref="GeneID:10488137" /translation="MAFFRFLFNLLWFVLGGVFMGLAWWLAGLVCFISLVGIPWGRAC FVIGTFTFFPFGKQAVNRKTMTGQSDIGTGTLGLIGNILWFVLIGVWLAIGHIASALA CFVTIIGIPFGIQHLKLALISLAPIGQMIVTNQEAESGRYIR" misc_feature 2496693..2497100 /locus_tag="B565_2220" /note="hypothetical protein; Provisional; Region: PRK11770" /db_xref="CDD:183306" misc_feature 2496696..2496854 /locus_tag="B565_2220" /note="Domain of unknown function (DUF307); Region: DUF307; pfam03733" /db_xref="CDD:190731" misc_feature 2496921..2497070 /locus_tag="B565_2220" /note="Domain of unknown function (DUF307); Region: DUF307; pfam03733" /db_xref="CDD:190731" gene 2497208..2497798 /locus_tag="B565_2221" /db_xref="GeneID:10488138" CDS 2497208..2497798 /locus_tag="B565_2221" /codon_start=1 /transl_table=11 /product="5'-nucleotidase YfbR" /protein_id="YP_004392873.1" /db_xref="GI:330829921" /db_xref="GeneID:10488138" /translation="MLPSHFFANLARMKLIYRWPLMRNIQPENIAEHSLQVAMVAHAL GIIKNRLFGGNVNADRAAVMALYHDSSEVLTGDLPTPVKYFNPEIAREYKKIELAAEQ RLLGMLPPELIDDFRPLLDSAAQDDELARLVKDADTLCAYTKCLEEINAGNREFEPAR KRLEAMLEARMSEEMRYFIDTFVASFSLPLDELNAH" misc_feature 2497217..2497789 /locus_tag="B565_2221" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" gene complement(2497886..2499127) /locus_tag="B565_2222" /db_xref="GeneID:10488139" CDS complement(2497886..2499127) /locus_tag="B565_2222" /codon_start=1 /transl_table=11 /product="lipoprotein releasing system, transmembrane protein LolE" /protein_id="YP_004392874.1" /db_xref="GI:330829922" /db_xref="GeneID:10488139" /translation="MFKPLPLFLGLRYSRSRRRNGFIAFISASSLIGIALGVMALILG LSAMNGFERELKDRVLSVVPQGELDAVERPLPDWPRLRDYLLAQPGVEAAAPVIRLNG LLEHGSALKGVQLRAVLPDLEANLSDAGKYMTGRGLRELQPGERGVILGKTIADKLGV KVGDSVALLLPQGGDQAGIKNPRREALTVVGLLEIGGQLDGLLGFMHLADAQAITGMG SDVEGFSLRVSDVLNAQNITIAAAQQFPHHVYIRSWMNSQGYLYQDIQMVRTVMYVVM LMVVAVACFNIVSTLVMAVNEKRSEIAILKTMGASPGQIRLTFVIQGMVNGVAGALLG ALLGGLLSSKLTQILGVIEKLIGHRFLNPDIYFIDFLPTELHMQDLLIVTGAAILMSL LATLYPAWRASGLVPSRELGH" misc_feature complement(2497895..2499118) /locus_tag="B565_2222" /note="outer membrane-specific lipoprotein transporter subunit LolE; Provisional; Region: PRK11146" /db_xref="CDD:182995" misc_feature complement(2498438..>2498863) /locus_tag="B565_2222" /note="MacB-like periplasmic core domain; Region: MacB_PCD; pfam12704" /db_xref="CDD:193180" misc_feature complement(2497907..2498281) /locus_tag="B565_2222" /note="FtsX-like permease family; Region: FtsX; pfam02687" /db_xref="CDD:190390" gene complement(2499127..2499825) /locus_tag="B565_2223" /db_xref="GeneID:10488140" CDS complement(2499127..2499825) /locus_tag="B565_2223" /codon_start=1 /transl_table=11 /product="lipoprotein release ABC transporter, ATPase component" /protein_id="YP_004392875.1" /db_xref="GI:330829923" /db_xref="GeneID:10488140" /translation="MNEAVSREPLLRCQALNHVYKEGELETQVLKGIDLCVAPGEMLA VVGSSGSGKTTLLHLMGALDNPSSGAVLFKGEDIHHWDSRTQARFRNRELGFVYQFHH LLSEFSALENAAMPLLIAGESVAVATEKATKMLGRVGLSHRLNHRPSELSGGERQRVA IARALVNEPSLVLADEPTGNLDHASATAVYELLCELNRELGTAFVVVTHDLSLAAKLH RRVTLVSGVMAEVA" misc_feature complement(2499136..2499798) /locus_tag="B565_2223" /note="lipoprotein releasing system, ATP-binding protein; Region: LolD_lipo_ex; TIGR02211" /db_xref="CDD:131266" misc_feature complement(2499148..2499795) /locus_tag="B565_2223" /note="This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together...; Region: ABC_MJ0796_Lo1CDE_FtsE; cd03255" /db_xref="CDD:73014" misc_feature complement(2499664..2499687) /locus_tag="B565_2223" /note="Walker A/P-loop; other site" /db_xref="CDD:73014" misc_feature complement(order(2499199..2499201,2499298..2499303, 2499529..2499531,2499661..2499669,2499673..2499678)) /locus_tag="B565_2223" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73014" misc_feature complement(2499529..2499540) /locus_tag="B565_2223" /note="Q-loop/lid; other site" /db_xref="CDD:73014" misc_feature complement(2499346..2499375) /locus_tag="B565_2223" /note="ABC transporter signature motif; other site" /db_xref="CDD:73014" misc_feature complement(2499298..2499315) /locus_tag="B565_2223" /note="Walker B; other site" /db_xref="CDD:73014" misc_feature complement(2499280..2499291) /locus_tag="B565_2223" /note="D-loop; other site" /db_xref="CDD:73014" misc_feature complement(2499193..2499213) /locus_tag="B565_2223" /note="H-loop/switch region; other site" /db_xref="CDD:73014" gene complement(2499914..2501149) /locus_tag="B565_2224" /db_xref="GeneID:10488141" CDS complement(2499914..2501149) /locus_tag="B565_2224" /codon_start=1 /transl_table=11 /product="lipoprotein releasing system transmembrane protein LolE" /protein_id="YP_004392876.1" /db_xref="GI:330829924" /db_xref="GeneID:10488141" /translation="MKTGLFQPLSLAIGLRYAGSKRSNRFVSFISLFSTFGIAIGVAA LMVVISVMNGFEGQLKGRILGVIPHVVVTNQAGRIDADPQGLPDLAKLPHVVASAPML DSEGMLQSPGQLTGVSVQGIDPAKWPKDDILHSQMLGGRLDTLQAGHYRIVLGQGVAR RLNVSIGDQVRLILTEGTRFTPFGRVPAQRLFTVSGIFGVGADVDNQIALIALGDAQR LLRLPPETVGGIRLWLDDPFAADEVIKTPLPDGLLWQDWRRERGELFQAVAMEKRMMG LMLVLIIAVATFNILSALVMVVTDKEGEVAILRTMGMSESGIVKIFMVLGASSGVIGA LFGGLAGLALSLGLNPLLNAVGLNLYMAAGGSGLPVIVEPAQVITILLGAVLLSFSAT LYPAARAARVKPAEALRYE" misc_feature complement(2499917..2501128) /locus_tag="B565_2224" /note="LolC/E family; Region: lolCE; TIGR02212" /db_xref="CDD:162764" misc_feature complement(<2500490..2500876) /locus_tag="B565_2224" /note="MacB-like periplasmic core domain; Region: MacB_PCD; pfam12704" /db_xref="CDD:193180" misc_feature complement(2499968..2500321) /locus_tag="B565_2224" /note="FtsX-like permease family; Region: FtsX; pfam02687" /db_xref="CDD:190390" gene 2501226..2501801 /locus_tag="B565_2225" /db_xref="GeneID:10488142" CDS 2501226..2501801 /locus_tag="B565_2225" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392877.1" /db_xref="GI:330829925" /db_xref="GeneID:10488142" /translation="MQEQFFSVTHATPVNVIPMPADFHLPSLEELDAELPEPFRISSA ITSIDLVTTRLLRNQNESMHDLIEIVNQQSRKIDMIMGYVLSLQDHPEQRFHTLRFGA GQLTYLHPYHDHGDAPHLHQIVRLKIFLREEAAAIYCYGQVKQLDGGEHGTHVQLDYV RIREDDRELLVRASLHVQSKQLKLRAQERQR" gene 2501852..2505325 /locus_tag="B565_2226" /db_xref="GeneID:10488143" CDS 2501852..2505325 /locus_tag="B565_2226" /codon_start=1 /transl_table=11 /product="transcription-repair coupling factor" /protein_id="YP_004392878.1" /db_xref="GI:330829926" /db_xref="GeneID:10488143" /translation="MPMTLPALPAKAGQKITLGQLVGSSLSLIAARLTSEAKGPVLLI TADTPSALRLEQELQYLLADKQLADQSAPVLLFPDWETLPYDTFSPHQDIISQRLETL YKLPQMSKGVLIVPISTLMLRCAPRVYLDKYSLMVKAGQRLNLQQLRGRLAEAGYVAV DQVLEHGEFAARGSLLDLFPMGSSSPYRIDFFDDEVDSIRPFDPETQRSSEPVKTVSL LPAREYPTDEAAIELFRGQFREQFELSRAEGSVYQEVSKGRWPAGIEYYLPLFFNQTA SLFDYLPEETLLLTVGDIYPAAQRFWNDIGQRYEDRRWDNTRPLLPPAQLYLPVEQLF ASLGQYGAVRLQEAATAGDAGQHDLPISALPDLQLDHSKEQPLLALNQFLQGFAGRTL FAVESEGRREVLGDLLARISLHPKEFPSLDAFMASPDRHGLLVAPLERGFLWQEVGQD PLALITETELLGGKVRSKRAREKSKNLSSDAVIRNLGELTQGQPVVHLDHGVGRYLGL ETIDAGGLPTEFLTLEYAGGDKLFVPVTSLHLISRYTGSDNPPSHKLGGEAWSKARRK AAEKVRDVAAELLDVYAHRAARAGFAFKHDKEAYRQFAASFPFEETDDQLNAINAVLG DMCQAKSMDRLVCGDVGFGKTEVAMRAAFVAVHGGKQVAVLVPTTLLAQQHYDNFRDR FANWPVRVEVLSRFRSAKEQSAVMKELAEGKVDIIIGTHKLLGSELTFKDLGLLIVDE EHRFGVRQKEKIKALRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAIKT FVRQHEPAVVREAVLRELKRGGQVYYLHNDVESIEKCAADLAELVPEARIGIAHGQMR ERDLERIMSDFYHQRFNLLVCTTIIETGIDVPSANTIIMDRADHLGLAQLHQLRGRVG RSHHQAYAYLLTPHPKLMTKDAAKRLEAIASLEDLGAGFALATHDLEIRGAGELLGDD QSGQIESVGFTLYMEMLEQAVEALKNGKEPSLEQLMSQHTEVELRLPALLPDDYIPDV NMRLSMYKRIASAADEQELRELKVELIDRFGLLPEATKTLLELAAFRQRATALGIRRV EMSERGGYLDFTQETKVNPAYLVKLLSSQPRVYKMDGPTRLRFQVPTQDRAMRLKLVD GLLADLANNSL" misc_feature 2501873..2505322 /locus_tag="B565_2226" /note="transcription-repair coupling factor; Provisional; Region: PRK10689" /db_xref="CDD:182649" misc_feature 2503313..2503600 /locus_tag="B565_2226" /note="CarD-like/TRCF domain; Region: CarD_TRCF; cl00588" /db_xref="CDD:193879" misc_feature 2503745..2504155 /locus_tag="B565_2226" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 2503772..2503786 /locus_tag="B565_2226" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 2504066..2504077 /locus_tag="B565_2226" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature 2504237..2504626 /locus_tag="B565_2226" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(2504330..2504341,2504405..2504410,2504483..2504491) /locus_tag="B565_2226" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(2504507..2504509,2504573..2504575,2504585..2504587, 2504594..2504596) /locus_tag="B565_2226" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature 2504894..2505196 /locus_tag="B565_2226" /note="TRCF domain; Region: TRCF; pfam03461" /db_xref="CDD:190644" gene complement(2505573..2506679) /locus_tag="B565_2227" /db_xref="GeneID:10488144" CDS complement(2505573..2506679) /locus_tag="B565_2227" /codon_start=1 /transl_table=11 /product="fructose-1,6-bisphosphatase class 1" /protein_id="YP_004392879.1" /db_xref="GI:330829927" /db_xref="GeneID:10488144" /translation="MIGIFFADACKRFQCQRMRSKGTKMRNMITMGEFIVKKQADYPT ATGELTSLLSSIRLAAKVVNREINKAGLADIIGSMGAENVQGEVQQKLDVYANERFKA ALEARGEVCGMASEEEEDFVAFDSPLSKNSKYVVLIDPLDGSSNIDVNVSVGTIFSIY RRLSPQGSPVTLEDFLQPGNRQVAAGYVVYGSSTMLVYTTGFGVNGFTYDPSIGCFCL SHENIRIPEEGKIYSINEGNYIKFPDGVKKYLKYCQERDEATHRPYTSRYIGSLVSDF HRNLLKGGIYIYPSGTNSPNGKLRLLYECNPMAFLVEQAGGKASDGFGRIMDIQPTAL HQRTPYFVGSTKMVERAEAFMREFSAHEDPANQC" misc_feature complement(2505618..2506631) /locus_tag="B565_2227" /note="fructose-1,6-bisphosphatase family protein; Region: PLN02628" /db_xref="CDD:178235" misc_feature complement(2505615..2506574) /locus_tag="B565_2227" /note="Fructose-1,6-bisphosphatase, an enzyme that catalyzes the hydrolysis of fructose-1,6-biphosphate into fructose-6-phosphate and is critical in gluconeogenesis pathway. The alignment model also includes chloroplastic FBPases and sedoheptulose-1,7-...; Region: FBPase; cd00354" /db_xref="CDD:30130" misc_feature complement(order(2506197..2506199,2506278..2506283, 2506530..2506538,2506542..2506544,2506563..2506565, 2506572..2506574)) /locus_tag="B565_2227" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:30130" misc_feature complement(order(2505768..2505770,2506257..2506259, 2506263..2506265,2506329..2506334,2506401..2506403)) /locus_tag="B565_2227" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:30130" misc_feature complement(order(2505786..2505788,2505816..2505818, 2505864..2505866,2505876..2505881,2505966..2505968, 2506245..2506250,2506254..2506256)) /locus_tag="B565_2227" /note="active site" /db_xref="CDD:30130" gene 2506990..2508606 /locus_tag="B565_2228" /db_xref="GeneID:10488145" CDS 2506990..2508606 /locus_tag="B565_2228" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter periplasmic binding protein" /protein_id="YP_004392880.1" /db_xref="GI:330829928" /db_xref="GeneID:10488145" /translation="MNKTLIAGMVAGLFALPAWAAQVPTGTKLLPDAQQIYVTNIGTE PTTIDPQLVEESAGSEIVNDLFEGLYVLDSKGKTQPAGAVSYEVDKTGTVYTFKLRPE AKWSNGEPVTAADYVYGWQRAADPKTASNYAWFIELTGVVNAGEVIQGKKSPSELGIK ALDDHTLQVTLKNPVPFFLKMLAHYTTFPAPKATIEKFGKDWVKPGNIVSNGAFVLKE WTPNERLSAERNTHYWDNQHTVLNKVVYLEIVSETAAYNRYRTGELHYTTYPLEQYKH IKSQSPEDLVSAPMLATYYYVFNVNRKPFDDPKVRKALSLALDRETITDKILGQGQLP AFSLTPPSVDGFDLKKPASQQQSKEERIKQAKALLAEAGYGPDKPLSVDILYNTNESH KKIALAVSSMWKHNLGVTATLNNMEWKTMVSALNEGDFGVSRYSWNGDYNDASTFLDI LTSSSSANSGKWFNKEYDALLAKAHDSQDAAERNQLYQQAEALIEADAPIAPLYFYVK SRLLKPFVKGYPYESPQDIVYSRDLYLVAQ" misc_feature 2506993..2508603 /locus_tag="B565_2228" /note="oligopeptide ABC transporter substrate-binding protein OppA; Provisional; Region: PRK15104" /db_xref="CDD:185059" misc_feature 2507092..2508594 /locus_tag="B565_2228" /note="The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold; Region: PBP2_OppA; cd08504" /db_xref="CDD:173869" misc_feature order(2507164..2507166,2507791..2507793,2507857..2507859, 2508241..2508243,2508289..2508291,2508295..2508309, 2508505..2508507) /locus_tag="B565_2228" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173869" gene complement(2508712..2509629) /locus_tag="B565_2229" /db_xref="GeneID:10488146" CDS complement(2508712..2509629) /locus_tag="B565_2229" /codon_start=1 /transl_table=11 /product="drug/metabolite transporter superfamily permease" /protein_id="YP_004392881.1" /db_xref="GI:330829929" /db_xref="GeneID:10488146" /translation="MPLAFLFPFSCIAIWAGNGIVSKLAVSVLSPAALAWSRWVVAAL VLSPFLARRVWRARARIRAGFWQIAMLALLGMVLNQTFGYYAAQTLGATEMGLMMGLT PLLTVLFSIWLLRERPTWGAVLGALLSILGLSILLGQGDPTRLFTQGIHIGSVYMLIS AGTYALYSVLLKKWDLGLDNWSLLYGQVICSVVILTPFFLLVDGHWPDGRALWLILYA GIPTSALSPWLWMQGIALLGANRTAIFMNLLPVMTAGLAITLLGERLTSYHLIGGGLT LLGVLLAQLLVRPVVMGRRRVVLAPCPEE" misc_feature complement(2508823..2509143) /locus_tag="B565_2229" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene complement(2509794..2510000) /locus_tag="B565_2230" /db_xref="GeneID:10488147" CDS complement(2509794..2510000) /locus_tag="B565_2230" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392882.1" /db_xref="GI:330829930" /db_xref="GeneID:10488147" /translation="MRVFKKYLPLMVAKHVKTFFKGRIYIHGRGRFDFQSGLLLMPNP ADIPHRQTVTEVNELISRLHMDAA" misc_feature complement(2509812..2510000) /locus_tag="B565_2230" /note="Protein of unknown function (DUF1107); Region: DUF1107; pfam06526" /db_xref="CDD:148248" gene complement(2510134..2510601) /locus_tag="B565_2231" /db_xref="GeneID:10488148" CDS complement(2510134..2510601) /locus_tag="B565_2231" /codon_start=1 /transl_table=11 /product="phosphohistidine phosphatase SixA" /protein_id="YP_004392883.1" /db_xref="GI:330829931" /db_xref="GeneID:10488148" /translation="MKIYIMRHGQAGMNAKTDEQRPLTEQGIEESIQMARWLAPQLIG PLDRVIHSNYLRARQTWQAICSELPDAAAVEESGDITPYGDPAFVASYLTTLAQQHDQ ILMVSHLPLVGYLVQSLCPAAGAPMFATSGIACIEWHDGKGALLWLEGPHTIG" misc_feature complement(2510158..2510598) /locus_tag="B565_2231" /note="Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction; Region: HP_PGM_like; cd07067" /db_xref="CDD:132718" misc_feature complement(order(2510275..2510280,2510434..2510436, 2510578..2510583)) /locus_tag="B565_2231" /note="catalytic core [active]" /db_xref="CDD:132718" gene 2510764..2513550 /locus_tag="B565_2232" /db_xref="GeneID:10488149" CDS 2510764..2513550 /locus_tag="B565_2232" /codon_start=1 /transl_table=11 /product="peptidase, insulinase family" /protein_id="YP_004392884.1" /db_xref="GI:330829932" /db_xref="GeneID:10488149" /translation="MSPYASPNDHRQYHFLELANRLRVLLICDPDTDKSAASLAVNTG HFDDPADRQGMAHFLEHMLFLGTCTYPKPGEYQQFMSRHGGSNNAWTGTEFTNFFFEI DNGFFEAGLDRFSQFFICPTFDPEWVDKERNAVDSEYRLKLQDDMRRSYQVHKETVNP AHPFSKFSVGNLDTLADLPGRDLRSDLIRFYESHYSADRMALVMISPESIDTQLQWCC RYFAPILNRNLGTPTLTMPLYRLDDLGVRIHINPVKETRKLSLSFPLPNVDEFYDKKP LTFLSHLIGYEGDGSLLSLLKAKGWVNQLSAGGGISGANFKDFGVNFGLTPLGLEHVD DILAALFGYLKLIGREGLQSWRYDEKRTVLESAFRFQERGRPLDTVSGLVLNLFSYKP EDLLYGDYMMREYDEGLIRRFLAKLTPHNLRITITAPEVATDRLARWYQTPYSVATIT EAEKIRWQQSEPDPALALPKPNPFISSRLDPRTPELAADMPACLIDRPGFRLWHLHEH LFSVPKGNLYISIDSEHAVKNPRNIAMARLAVELLADHLNALTYPAELAGLGYQIYAH QGGFTINLSGFADKQPLLLDMILGNRTLGYPDPGRFAEIKEQLIRNWDNQSKARPISQ LFNQLTSLLQPNNPPFEQLLRHLRTVELEEMPGFVAQLFGEVHVEALVHGDWTAAEAL ELAALMERHLSDINGTSSKPSGETRRPLISIQDRGTLIREQGCDHEDSALLVYYQSRT TRARDLACFTLANHIMSSTFFHELRTRQQLGYVVGAGNLPLNRHPGLIFYIQSPVAGP QILLDAVEEFIDLFPLAMLEFTEQQWQESKAGLQAQLSERDANLRSRGQRLWVSIGNK DLGFDQRERVCDEVGKLSRADLVRFITQLRSRTSDRLILCSYGQGHEHDERITGQFID DPRAFRLNAATFEA" misc_feature 2510779..2513532 /locus_tag="B565_2232" /note="Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]; Region: Ptr; COG1025" /db_xref="CDD:31228" misc_feature 2510830..2511246 /locus_tag="B565_2232" /note="Insulinase (Peptidase family M16); Region: Peptidase_M16; pfam00675" /db_xref="CDD:189663" misc_feature 2511313..2511855 /locus_tag="B565_2232" /note="Peptidase M16 inactive domain; Region: Peptidase_M16_C; pfam05193" /db_xref="CDD:191225" misc_feature 2512708..2513256 /locus_tag="B565_2232" /note="Peptidase M16 inactive domain; Region: Peptidase_M16_C; pfam05193" /db_xref="CDD:191225" gene complement(2513882..2514529) /locus_tag="B565_2233" /db_xref="GeneID:10488150" CDS complement(2513882..2514529) /locus_tag="B565_2233" /codon_start=1 /transl_table=11 /product="thiopurine S-methyltransferase" /protein_id="YP_004392885.1" /db_xref="GI:330829933" /db_xref="GeneID:10488150" /translation="MEAAFWHQRWEENRIGFHQADFNHWLQSWWSAQQADEPVLVPLC GKSRDMLWLSAQGHPVDGFELSSLAVSQFFSENQLAATVSEVGPYQCHQVDSLRIFQG DFFAAPSLGRRYRLVYDRAALIALPTAMRRQYAALISSLVETGGQILLVTLEYQPEQQ TQPPFSVGEMEVRALFERDFRIEVLGRAAEVDHPRVLSGQLSYFDEVAYRLVRRG" misc_feature complement(2513888..2514529) /locus_tag="B565_2233" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene complement(2514813..2516183) /locus_tag="B565_2234" /db_xref="GeneID:10488151" CDS complement(2514813..2516183) /locus_tag="B565_2234" /codon_start=1 /transl_table=11 /product="serine/threonine protein kinase" /protein_id="YP_004392886.1" /db_xref="GI:330829934" /db_xref="GeneID:10488151" /translation="MHTLEQLRAGELCGARHLKLSENLTEFPTEILSLKETLEVLDLT GNQLSTLPDELAGFGKLRIIFCSENRFTELPEVLGRCPALTMVGFKANRIATVSARAL PAGLRWLILTDNAIEQLPDELGQCDALQKLMLAGNRLRELPASLANCRNLELLRIAAN RIERFPEWLLSLPRLSWLAYSGNPFSEGEEARVIDDTHVAPLAWETLALGELLGQGAS GVIHRATLVANPADEVTQASGRADASQVAVKLFKGAVTSDGLPRCEMAASLAAGSHPN LIKVIGKVADHPSGIPALVMELIDPAFANLAGPPSLDSCTRDVYPEGLHLSVPDALAM AQGIASVAGHLHRAGIMHGDLYGHNILFSRGSDAPARALLGDFGAASLYDRSDRERAL GLERLEVRAFGCLLEELLAHCDTQDSPLDGLHQLKAACLSELPADRPDFTYIELQLAA ARATLS" misc_feature complement(<2515623..>2516129) /locus_tag="B565_2234" /note="Leucine-rich repeat (LRR) protein [Function unknown]; Region: COG4886" /db_xref="CDD:34495" misc_feature complement(2514840..2515565) /locus_tag="B565_2234" /note="Protein tyrosine kinase; Region: Pkinase_Tyr; pfam07714" /db_xref="CDD:191821" misc_feature complement(2514837..2515553) /locus_tag="B565_2234" /note="Protein Kinases, catalytic domain; Region: PKc_like; cl09925" /db_xref="CDD:195926" misc_feature complement(order(2514984..2514995,2515047..2515049, 2515056..2515058,2515101..2515103,2515107..2515112, 2515116..2515118,2515122..2515124,2515245..2515247, 2515251..2515253,2515287..2515298,2515350..2515352, 2515437..2515439,2515443..2515445,2515521..2515523, 2515533..2515547)) /locus_tag="B565_2234" /note="active site" /db_xref="CDD:173623" misc_feature complement(order(2515056..2515058,2515101..2515103, 2515107..2515112,2515116..2515118,2515122..2515124, 2515251..2515253,2515287..2515298,2515350..2515352, 2515437..2515439,2515443..2515445,2515521..2515523, 2515533..2515547)) /locus_tag="B565_2234" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:173623" misc_feature complement(order(2514984..2514995,2515047..2515049, 2515110..2515112,2515116..2515118,2515122..2515124, 2515245..2515247,2515251..2515253,2515533..2515535)) /locus_tag="B565_2234" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:173623" misc_feature complement(order(2514984..2514995,2515041..2515061)) /locus_tag="B565_2234" /note="activation loop (A-loop); other site" /db_xref="CDD:173623" gene complement(2517403..2517573) /locus_tag="B565_2235" /db_xref="GeneID:10488152" CDS complement(2517403..2517573) /locus_tag="B565_2235" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392887.1" /db_xref="GI:330829935" /db_xref="GeneID:10488152" /translation="MDKYYCADQIQLHIPELFLVQIPNLGGMAAIQKHNHLYLVDLFE LLHQGHFQHPMQ" gene 2518252..2519414 /locus_tag="B565_p008" /note="Putative transposase" /pseudo /db_xref="GeneID:10488153" gene complement(2519813..2519956) /locus_tag="B565_2236" /db_xref="GeneID:10489953" CDS complement(2519813..2519956) /locus_tag="B565_2236" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392888.1" /db_xref="GI:330829936" /db_xref="GeneID:10489953" /translation="MHTAKHTKANAEGVKAERPEIREVPKGKFEKFETVEQVYAKLFG AMP" gene complement(2521309..2521581) /locus_tag="B565_2237" /db_xref="GeneID:10488154" CDS complement(2521309..2521581) /locus_tag="B565_2237" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392889.1" /db_xref="GI:330829937" /db_xref="GeneID:10488154" /translation="MSEQAVLVGGWTAYHKLTAEDQAVFDQALKGFVGVQYVPFEVST QVVAGTNYRFKCKSTVPLAKPIHGEAVVQIFKSLDGDAHITSITPI" gene complement(2521961..2523550) /locus_tag="B565_2238" /db_xref="GeneID:10488155" CDS complement(2521961..2523550) /locus_tag="B565_2238" /codon_start=1 /transl_table=11 /product="bifunctional GMP synthase/glutamine amidotransferase protein" /protein_id="YP_004392890.1" /db_xref="GI:330829938" /db_xref="GeneID:10488155" /translation="MTKDIHQHRILILDFGSQYTQLIARRVREIGVYCELWAWDVTEE QIREFNPSGIILSGGPESVTEAGSPRAPEYVFNAGVPVFGICYGMQTMAEQLGGKVQS STEREFGYAKVEVLGEAGKSSALLRNIEDAIADNGNALLDVWMSHGDKVTTIPADFTT IAQTPTCPHAAMANEAKRFYGVQFHPEVTHTRQGARMLEHFVKDICGCECLWTPATII DDAVARIREQVGDDEVILALSGGVDSSVVAMLVQRAIGDRLTCVFVDNGLLRLNEGEQ VMEMFGDHFGLNIIKVEAEERFLSALAGVDEPEAKRKIIGRVFVEVFDDEAKKLKNAK WLAQGTIYPDVIESAASKTGKAHVIKSHHNVGGLPEEMKMGLVEPLRELFKDEVRRVG LELGLPYDMLYRHPFPGPGLGVRVLGEVKKEYCDILRRADAVFIEELRKADLYNQVSQ AFAVFLPVRSVGVMGDGRKYDWVIALRAVETIDFMTAHWAHLPYDFLGHVSNRIINEI NGISRVVYDVSGKPPATIEWE" misc_feature complement(2521964..2523538) /locus_tag="B565_2238" /note="GMP synthase; Reviewed; Region: guaA; PRK00074" /db_xref="CDD:178842" misc_feature complement(2522945..2523523) /locus_tag="B565_2238" /note="Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase; Region: GATase1_GMP_Synthase; cd01742" /db_xref="CDD:153213" misc_feature complement(order(2522996..2522998,2523113..2523115, 2523290..2523295,2523371..2523379,2523497..2523502)) /locus_tag="B565_2238" /note="AMP/PPi binding site [chemical binding]; other site" /db_xref="CDD:153213" misc_feature complement(order(2523290..2523292,2523374..2523376)) /locus_tag="B565_2238" /note="candidate oxyanion hole; other site" /db_xref="CDD:153213" misc_feature complement(order(2522990..2522992,2522996..2522998, 2523293..2523295)) /locus_tag="B565_2238" /note="catalytic triad [active]" /db_xref="CDD:153213" misc_feature complement(order(2523002..2523004,2523110..2523112, 2523281..2523283)) /locus_tag="B565_2238" /note="potential glutamine specificity residues [chemical binding]; other site" /db_xref="CDD:153213" misc_feature complement(2521967..2522851) /locus_tag="B565_2238" /note="The C-terminal domain of GMP synthetase. It contains two subdomains; the ATP pyrophosphatase domain which closes to the N-termial and the dimerization domain at C-terminal end. The ATP-PPase is a twisted, five-stranded parallel beta-sheet sandwiched...; Region: GMP_synthase_C; cd01997" /db_xref="CDD:30184" misc_feature complement(order(2522297..2522341,2522357..2522431, 2522444..2522473,2522498..2522500,2522504..2522548, 2522564..2522677,2522708..2522740,2522744..2522776, 2522780..2522851)) /locus_tag="B565_2238" /note="ATP Binding subdomain [chemical binding]; other site" /db_xref="CDD:30184" misc_feature complement(order(2522396..2522398,2522759..2522761, 2522765..2522767,2522819..2522830,2522834..2522842)) /locus_tag="B565_2238" /note="Ligand Binding sites [chemical binding]; other site" /db_xref="CDD:30184" misc_feature complement(order(2521967..2522035,2522039..2522065, 2522084..2522131,2522141..2522173,2522180..2522209, 2522234..2522272)) /locus_tag="B565_2238" /note="Dimerization subdomain; other site" /db_xref="CDD:30184" gene complement(2523635..2525098) /locus_tag="B565_2239" /db_xref="GeneID:10488156" CDS complement(2523635..2525098) /locus_tag="B565_2239" /codon_start=1 /transl_table=11 /product="Inosine-5'-monophosphate dehydrogenase" /protein_id="YP_004392891.1" /db_xref="GI:330829939" /db_xref="GeneID:10488156" /translation="MLRIAKEALTFDDVLLVPAHSEVLPNTADLRTKLTSAISLNIPM ISAAMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKYESGVVTDPVTVRP DMTIAQIKELSHKNGFAGYPVVTDGNQLVGIITGRDVRFVIDLSQTVEQIMTQKDRLV TVREGAPREEVVALMQKHRIEKVLVVNGDFKLKGMITVKDFQKAERKPHACKDDKGRL RVGAAVGAGAGNEERVAALVEAGVDVLLIDSSHGHSQGVLDRIKATRDAYPDLQIIGG NVATAAGAKALAAAGVNAVKVGIGPGSICTTRIVTGVGVPQITAISDAVDALEGTGIP VIADGGIRFSGDIAKAIAAGASCVMVGSMFAGTEEAPGEIELYQGRSFKSYRGMGSLG AMSKGSSDRYFQTDNAADKLVPEGIEGRVPYKGRLKEIIHQQMGGLRSSMGLTGSATI DDMRTKAEFVRISGAGMKESHVHDVTITKEAPNYRMG" misc_feature complement(2523638..2525098) /locus_tag="B565_2239" /note="inosine 5'-monophosphate dehydrogenase; Reviewed; Region: PRK05567" /db_xref="CDD:180134" misc_feature complement(<2524835..2525077) /locus_tag="B565_2239" /note="TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate...; Region: TIM_phosphate_binding; cl09108" /db_xref="CDD:195791" misc_feature complement(2524487..2524819) /locus_tag="B565_2239" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein. IMPDH is an essential enzyme that catalyzes the first step unique to GTP synthesis, playing a key...; Region: CBS_pair_IMPDH; cd04601" /db_xref="CDD:73101" misc_feature complement(2523713..>2524390) /locus_tag="B565_2239" /note="IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the...; Region: IMPDH; cd00381" /db_xref="CDD:73364" misc_feature complement(order(2523851..2523856,2523932..2523940, 2523944..2523946,2524013..2524018,2524079..2524081, 2524085..2524087,2524184..2524192)) /locus_tag="B565_2239" /note="active site" /db_xref="CDD:73364" gene complement(2525543..2526094) /locus_tag="B565_2240" /db_xref="GeneID:10488157" CDS complement(2525543..2526094) /locus_tag="B565_2240" /codon_start=1 /transl_table=11 /product="cytochrome b561 family protein" /protein_id="YP_004392892.1" /db_xref="GI:330829940" /db_xref="GeneID:10488157" /translation="MNPSTRLSLTTRLLHWSVALLMIGLTLVGYLMVKFEIWDLYALH KSLGVIALILILPRAILRLVKGWPEPVRQYPVYEALAARAIHWGLLISTLLIPVSGLC YSAAAGRGVAIFGWSIIPMNPDIHDPDNVIPFSESVRDIAHTVHIYLPYIMLAFLLVH IVGALKHHLLDKDNTLLRMVGRK" misc_feature complement(2525546..2526052) /locus_tag="B565_2240" /note="Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria...; Region: Cytochrome_b_N; cl00859" /db_xref="CDD:186225" gene 2526385..2527764 /locus_tag="B565_2241" /db_xref="GeneID:10488158" CDS 2526385..2527764 /locus_tag="B565_2241" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease 7 large subunit" /protein_id="YP_004392893.1" /db_xref="GI:330829941" /db_xref="GeneID:10488158" /translation="MNRFTPSSAANGREQQVFTVTRLNSAVRMILEQDLGLVWLTGEL SNLAMPSSGHWYFSLKDMSAQVRCAMFKGNNRRVAFRPQDGMQVLVQARVSLYEPRGD YQLIIESMQPAGDGVLALRFEELKRRLGAEGLFDESRKRPLPREPRAVGLVTSSTGAA LHDMLTVLKRRAPDLPVFIYPTQVQGSAAISQIVAAIAKANQRAEVDVLIVGRGGGSL EDLWCFNEEAVARAIAHSAIPVVSAVGHEVDVTISDFAADLRAPTPSAAAELVAPDQS ARAQRLVHLKQRLLQAMSRQQTAARHDFILLQKRLDHQDPKRRLEQQSQRLDELSSRL QQLLRQRLHQGERRLTNLELRLQGKSPERLLAAGKRRHQLAEERLHALIAKRQDLASH RLAMLTARLDGVSPLATLGRGYSITRTARGEVISRADQVNSGDQLVTTLAQGSLQVRV EEVIKDSAQ" misc_feature 2526424..2527737 /locus_tag="B565_2241" /note="exodeoxyribonuclease VII large subunit; Reviewed; Region: xseA; PRK00286" /db_xref="CDD:178962" misc_feature 2526496..2526726 /locus_tag="B565_2241" /note="ExoVII_LU_OBF: A subfamily of OB folds corresponding to the N-terminal OB-fold domain of Escherichia coli exodeoxyribonuclease VII (ExoVII) large subunit. E. coli ExoVII is composed of two non-identical subunits. E. coli ExoVII is a single-strand-...; Region: ExoVII_LU_OBF; cd04489" /db_xref="CDD:72961" misc_feature order(2526499..2526501,2526643..2526645,2526649..2526651, 2526655..2526657,2526715..2526717) /locus_tag="B565_2241" /note="generic binding surface II; other site" /db_xref="CDD:72961" misc_feature order(2526514..2526522,2526550..2526561,2526565..2526567, 2526583..2526591,2526595..2526597,2526640..2526642, 2526661..2526669,2526694..2526702) /locus_tag="B565_2241" /note="generic binding surface I; other site" /db_xref="CDD:72961" gene complement(2527881..2528600) /locus_tag="B565_2242" /db_xref="GeneID:10488159" CDS complement(2527881..2528600) /locus_tag="B565_2242" /codon_start=1 /transl_table=11 /product="transcriptional regulator of succinyl-CoA synthetase operon" /protein_id="YP_004392894.1" /db_xref="GI:330829942" /db_xref="GeneID:10488159" /translation="MSKKPMYRQIADTIQQWIAQGELAPGDALPTEAELREQFGVSRV TVRQALKQLTELNVIESIQGSGSYVRQEKVNYDIYQLTSLYEKVTDPAAETHSDILAF EVIKASSELAERLNLLEGALVYYVKRVRFIRQIAVTLEETWMPLALFPDLSYAVMQGS KYHYIEEVKQLVIDRSEQEIIPVLPSAQVVEALGIDPAKPIIEKVSRGFLQDGTVFEF SRNFFKSDDYKFTLVARRAKG" misc_feature complement(2527893..2528600) /locus_tag="B565_2242" /note="DNA-binding transcriptional repressor MngR; Provisional; Region: PRK09764" /db_xref="CDD:182065" misc_feature complement(2528391..2528588) /locus_tag="B565_2242" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature complement(order(2528400..2528411,2528415..2528420, 2528448..2528450,2528457..2528462,2528466..2528480, 2528502..2528507,2528511..2528513,2528580..2528582, 2528586..2528588)) /locus_tag="B565_2242" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature complement(2527914..2528321) /locus_tag="B565_2242" /note="UTRA domain; Region: UTRA; cl06649" /db_xref="CDD:195338" gene 2528848..2530794 /locus_tag="B565_2243" /db_xref="GeneID:10488160" CDS 2528848..2530794 /locus_tag="B565_2243" /codon_start=1 /transl_table=11 /product="Permease IIC component" /protein_id="YP_004392895.1" /db_xref="GI:330829943" /db_xref="GeneID:10488160" /translation="MNLTSLTGPHLITLQTRFADRDAAIHALADRLDQAGKLHDKAAF LAAVMAREAQGPTALGEGLAVPHGKCDAVREAAFAVATLSEELGWEGIDGPEPVNLIF MLAIPTDQAGSTHMQLLTTLTTALVDDDTREAVLAAQSAEQLMALLDGEEDGDKQPAK EDNLNTNQPTVVCVTACPAGIAHTYMAAEYLEKAGRKLGIRVMVEKQGANGIEDRLPQ EALDAAVACIFAAEVAIKEQERFAGIPRIETPVAEPIRHAERILNDALDAAKAGRTAP TPSTSQSDAPTGKKVSLKTELKQALLSGISFAVPLIVAGGTVLAVSVLLAQIFGLQHL FDTENSWLWMYRKLGGGMLGTLMVPVLAAYTAYSLADKPALGPGFAAGLAANMIGSGF LGGVVGGLIAGYLMRWVKQHVRLSPNFNGFLTFYLYPVIGTLVAGSLMLFVIGQPVAW LNNSLTEWLNGLSGTNALVLGALLGFMCSFDLGGPVNKAAYAFCLGAMANGVYGPYAI FGAVKMVSAFTVTFSTLLAPRLFQTFEIETGKSTWLLGLAGITEGAIPMAIEDPIRVI GSFLAGSVVTGAMVGAMGIGLSTPGAGIFSLFLLHDGGHGALMAAAVWLGAALVGTLI STVVLIGWRRHAMQRGTYQVVAAE" misc_feature 2528848..2530773 /locus_tag="B565_2243" /note="PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional; Region: PRK09765" /db_xref="CDD:182066" misc_feature 2528872..2529291 /locus_tag="B565_2243" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cd00211" /db_xref="CDD:29266" misc_feature order(2528998..2529000,2529046..2529048) /locus_tag="B565_2243" /note="active site" /db_xref="CDD:29266" misc_feature 2529046..2529048 /locus_tag="B565_2243" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29266" misc_feature 2529358..2529645 /locus_tag="B565_2243" /note="PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII (also referred to as FruAB) is a fructose-specific permease made up of two proteins (FruA...; Region: PTS_IIB_fructose; cd05569" /db_xref="CDD:99911" misc_feature order(2529376..2529387,2529391..2529399) /locus_tag="B565_2243" /note="P-loop; other site" /db_xref="CDD:99911" misc_feature order(2529376..2529378,2529382..2529387,2529394..2529399) /locus_tag="B565_2243" /note="active site" /db_xref="CDD:99911" misc_feature 2529376..2529378 /locus_tag="B565_2243" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99911" misc_feature 2529733..2530650 /locus_tag="B565_2243" /note="Phosphotransferase system, EIIC; Region: PTS_EIIC; cl00557" /db_xref="CDD:186079" gene 2530881..2533535 /locus_tag="B565_2244" /db_xref="GeneID:10488161" CDS 2530881..2533535 /locus_tag="B565_2244" /codon_start=1 /transl_table=11 /product="alpha-mannosidase mngB" /protein_id="YP_004392896.1" /db_xref="GI:330829944" /db_xref="GeneID:10488161" /translation="MTVSRVHITPHMHWDREWYFTTEESRILLVNNMAEILARLESDP DYKFYVLDGQTAVLEDYFAIQPENKARVKALVEAGKLIIGPWYTQTDTMQVSGESILR NLLYGMRDCLSLGEPMKIGYLPDSFGMSSQLPHIFNGFGIDRAMFWRGCSERHGTDKT EFLWQSNDGSEVTAQVLPLGYAIGKYLPEDEAGLRKRLESYFEVLEKASVTKDILLPN GHDQMPLQQNIFAIIDKLREIYPQREFHMSRFEQVFERIEACRDQLATLKGEFNDGKY MRVHRTISSTRMDIKLAHAAIENKIVNILEPLASIAWALGFEYHHGLLEKMWKEIMKN HAHDSIGCCCSDKVHQEVMTRFILADDMAENLIRFYMRKIVDNMPVALCEDGVQVADK LCLFNLMPFPRQEVINTSIRIRAQSFALRDEAGQPVPYFIRARREIDPGLVDRQIVHY GNYDPFMEYDIQLCHPLPAMGYCTLHIEGNQPGLEQPVTASGELLENDFYRIALNDNG TLQILDKLRGTTFDQVLTLEEGSDDGDEYDYSPSRDEWLRYSTEFAVTRKVTHQAWQS IATLKLRMALPANLAERASRQCSGHLDVTCRITLAHQSPRIDIELELDNQADDHRVRV LIPTPFPSDTVVSDNQFGCITRPTRDSAMANWEAEGWKEAPIPVWQLMNFVALQDGKQ GLAVLSDGLREFEVIGEQCDTLALTLLRGVGVLGKEELLLRPGRPSGIKLPTPDSQVR GKLSSRFSLLAFAGDHISANVMQAARSYLTPVRCYNKIPFDAMKLNKASFTTPLHFSL LTMDPSGPVLSALKKAEDEEALVIRVYNPSEQAVLEGGKMSSEHALSDWQAVRMDEQP LPLELAAGEFGELAPCHSRSVRFRVARG" misc_feature 2530881..2533520 /locus_tag="B565_2244" /note="alpha-mannosidase; Provisional; Region: PRK09819" /db_xref="CDD:182093" misc_feature 2530896..2531693 /locus_tag="B565_2244" /note="Glycosyl hydrolases family 38 N-terminal domain; Region: Glyco_hydro_38; pfam01074" /db_xref="CDD:144606" misc_feature 2531718..2531948 /locus_tag="B565_2244" /note="Alpha mannosidase, middle domain; Region: Alpha-mann_mid; cl08536" /db_xref="CDD:195785" misc_feature 2532309..2533373 /locus_tag="B565_2244" /note="Glycosyl hydrolases family 38 C-terminal domain; Region: Glyco_hydro_38C; pfam07748" /db_xref="CDD:149037" gene complement(2533704..2534693) /locus_tag="B565_2245" /db_xref="GeneID:10488162" CDS complement(2533704..2534693) /locus_tag="B565_2245" /codon_start=1 /transl_table=11 /product="D-alanine--D-alanine ligase" /protein_id="YP_004392897.1" /db_xref="GI:330829945" /db_xref="GeneID:10488162" /translation="MKNMHVLLLCGGGGSEHEVSLRSANFLEQQLGLLSGVEVTRVEM FADRWLSADGRECKLGLDKLLSFDSVARPVDYVVPCIHGYPGETGDLQSFLELAGLPY LGCDAEASKICFNKISTKLWLSAIGIPNTPYLFLTEQNEAALAEAKAALAKWGKVFIK AASQGSSVGCYSASNEADLVKGIADAFGYSEQVLIEKAVKPRELEVAVYQYGDELVAT YPGEICVPQDKFYTYEEKYSSASHTETALRAEGLTQAQADAIHEYALKAFRQLKLTHL SRIDFFLTEEGEILLNEINTFPGMTSISMFPKLLEHHGHRFSDYLEQILRKAS" misc_feature complement(2533710..2534693) /locus_tag="B565_2245" /note="D-alanyl-alanine synthetase A; Reviewed; Region: ddl; PRK01966" /db_xref="CDD:179356" misc_feature complement(2534379..2534684) /locus_tag="B565_2245" /note="D-ala D-ala ligase N-terminus; Region: Dala_Dala_lig_N; pfam01820" /db_xref="CDD:190121" misc_feature complement(2533719..2534327) /locus_tag="B565_2245" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" gene complement(2534898..2535455) /locus_tag="B565_2246" /db_xref="GeneID:10488163" CDS complement(2534898..2535455) /locus_tag="B565_2246" /codon_start=1 /transl_table=11 /product="SM-20-like protein" /protein_id="YP_004392898.1" /db_xref="GI:330829946" /db_xref="GeneID:10488163" /translation="MDDFLTAAEVDALKACLPSEWQPAGIGRNALHQGNPDIRRDQIH WLEPSLGAPVADYLARMESLRLAANRMLMLGLFDYEAHFARYRSGDFYATHRDAFAGR SNRRLTTVFYLNNDWLPEAGGVLRMYDDKEQFLMDVSPKGGRLVMFLSEEFPHEVLPA NRERYSIAGWFRVNGNGMGRVDPPR" misc_feature complement(2534925..>2535449) /locus_tag="B565_2246" /note="2OG-Fe(II) oxygenase superfamily; Region: 2OG-FeII_Oxy; cl01206" /db_xref="CDD:194067" gene 2535857..2536333 /locus_tag="B565_2247" /db_xref="GeneID:10488164" CDS 2535857..2536333 /locus_tag="B565_2247" /codon_start=1 /transl_table=11 /product="glutathione peroxidase 2" /protein_id="YP_004392899.1" /db_xref="GI:330829947" /db_xref="GeneID:10488164" /translation="MPLPDLTLQRLDGTPYPLTQLAGKVVLVVNVASRCGFTPQYEGL ETLYRELGPKGLVILGFPCNQFGQQEPGDADEIARFCSLDYPVTFPIMAKCDVNGEHA HPFYQWLKQQKPGFLGLENVKWNFTKFLIDCNGKVVDRFAPTTKPESLAEQISEML" misc_feature 2535869..2536318 /locus_tag="B565_2247" /note="Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue...; Region: GSH_Peroxidase; cd00340" /db_xref="CDD:48492" misc_feature order(2535959..2535961,2536061..2536063,2536226..2536228) /locus_tag="B565_2247" /note="catalytic residues [active]" /db_xref="CDD:48492" misc_feature order(2536058..2536060,2536067..2536069,2536073..2536075, 2536082..2536084,2536091..2536093,2536103..2536105) /locus_tag="B565_2247" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48492" gene 2536516..2537904 /locus_tag="B565_2248" /db_xref="GeneID:10488165" CDS 2536516..2537904 /locus_tag="B565_2248" /codon_start=1 /transl_table=11 /product="putative ATP-dependent RNA helicase RhlE" /protein_id="YP_004392900.1" /db_xref="GI:330829948" /db_xref="GeneID:10488165" /translation="MSFNELGLSPHILRAVKELGYEQPTPIQQQAIPAILAGQDVLGG AQTGTGKTAGFTLPMLQRLLANHGRGRRQVRALVLTPTRELAAQVGESIIKYAHHLPF KTLIAYGGVSIKPNLDAIKLGVDILVATPGRLLDLLTQGALTLSQLEVLVLDEADRML DMGFIVDIRRIMKALPAERQTLLFSATFSNDIKALADDLLNDPTLIEVDPSNTAAEQV TQRIIQVDRERRRELLSHMIGRGNWQRVLVFVRTKQIADRLAQQMQKDGLNTVAIHGD KSQGARNRALADFRSGEVRVLVATDIAARGLDIDQLPYVINFELPQMAEDYIHRIGRT GRAGRGGEAISLVSQDELGQLKAIEALIGQSLSVEILEGYEPSGKPSRQTLPGSKPVQ NPPRARGHANAKSSNAKGKPAAGKGKAKGDASKKTAPARKREVVGEDIGFAPMRRLPK AQRDSYQESSDE" misc_feature 2536522..2537136 /locus_tag="B565_2248" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cl14882" /db_xref="CDD:197446" misc_feature 2536657..2536671 /locus_tag="B565_2248" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 2536975..2536986 /locus_tag="B565_2248" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature 2537164..2537553 /locus_tag="B565_2248" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(2537266..2537277,2537335..2537340,2537413..2537421) /locus_tag="B565_2248" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(2537437..2537439,2537500..2537502,2537512..2537514, 2537521..2537523) /locus_tag="B565_2248" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene complement(2538016..2539386) /locus_tag="B565_2249" /db_xref="GeneID:10488166" CDS complement(2538016..2539386) /locus_tag="B565_2249" /codon_start=1 /transl_table=11 /product="Coproporphyrinogen III oxidase" /protein_id="YP_004392901.1" /db_xref="GI:330829949" /db_xref="GeneID:10488166" /translation="MTIMNLTPSMTGIATPDPLKFAFSAKTSAHASRGGMRPFPLDEA GWQSWWQRESEAEECALYIHIPFCRKRCSFCNFFENGANPARINRYVNALCTSLAQAA DTPLAQSMPFSAVYVGGGTPTDMSADELAMLAAVIRRFPLAADAEVTLEGRLNGFDDE KWQVALAGGFNRFSFGVQSFDTRVRQQAARFDDRETLLTRLGELTRDDAAVIVADLIF GLPGQDDAVWQQDIRDVMASGVHGVDLYQLIAMQGTNLERAQEKGTLDWLADGQQRAA MYAYGGAQLEAHGWERLSCSHWRRSPAEQSRYNQMAKRGAEILPFGAGAGGSILGHGL MYGRDLAPWHDALASGKRAPGMVMGRNPNARMDGLLRGALDSGVLALDRLPTPLLTHL MPLFAAWQQHGLAEIENARLQLTLAGRFWNVNMQAGLFEFLQHNPLDGSAPPSHGTAA VRHSLV" misc_feature complement(2538058..2539383) /locus_tag="B565_2249" /note="coproporphyrinogen III oxidase; Provisional; Region: PRK09058" /db_xref="CDD:181630" misc_feature complement(2538682..2539203) /locus_tag="B565_2249" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene 2539633..2541228 /locus_tag="B565_2250" /db_xref="GeneID:10488167" CDS 2539633..2541228 /locus_tag="B565_2250" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004392902.1" /db_xref="GI:330829950" /db_xref="GeneID:10488167" /translation="MHNLSLNWKIFLPLALVISTTFGLCFELSAWLQRDLAIRLAEEK VESMANTYMDQVNVLMMTGGMANRQIVQTKLKSEAGIVEARLVRAPAVSNLFGPGHPD QKVQDPLDERAINQGEAILEQQGNRLTLIKPFKAYKEYRGTQCLTCHQVNEGTVMGAV RISYDLSHTFGEIRHNNLILSGSLAAVFSLGFGLLWWVLQRYVKHPLRQLQLTMIRMA KERDLALPLVNHSRDELGQMTRAVNDMVQGFRHSLQEVEGATHQLYQESNQIRQVATQ TENSARQQEGMTTQVAAAVSELAASSHEVREHARHSAELSALTNQDAADTSRLAQHSI TDMGEMSAEIDRVDQVIQQLDSRCLAVDGVLEVIKGIADQTNLLALNAAIEAARAGEQ GRGFAVVADEVRALSNRSRAASEEISQMIAALQNEAQSAVTVIGDAKSKADESISKTE ATLAAMQNIIERIARINDLNAQMAQSAEEQDRVCHEVDSSVSDIRNTSNDTLGQAHAA NLASIQLVEQCQKLEALLKTYRW" misc_feature 2540164..2540373 /locus_tag="B565_2250" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 2540437..2541222 /locus_tag="B565_2250" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 2540599..2541222 /locus_tag="B565_2250" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(2541355..2542410) /locus_tag="B565_2251" /db_xref="GeneID:10488168" CDS complement(2541355..2542410) /locus_tag="B565_2251" /codon_start=1 /transl_table=11 /product="2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha" /protein_id="YP_004392903.1" /db_xref="GI:330829951" /db_xref="GeneID:10488168" /translation="MQHQTDDVRISEIKELLPPVAVLEKFPATEVASSTVFESRQAIH NILAGEDDRLLVVIGPCSIHDPVAALEYGKRLKALRDELKGQLEIVMRVYFEKPRTTV GWKGLINDPYLDNSCKINDGLRIGRKLLLDLNDMGLPTASEFLDMITPQYVADLMSWG AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAIGAASAPHHFLSVTKYGHS AIVATRGNPDCHIILRGGREPNYSAAHVSEVVKGLEKAGLPQKVMIDFSHANSSKQFK NQMVVAEDVAGQLRAGSKAVFGVMVESHLVEGRQDLVEGCELTVGQSITDACIGWADT EVLLRNLADAVATRNAR" misc_feature complement(2541367..2542410) /locus_tag="B565_2251" /note="NeuB family; Region: NeuB; cl00496" /db_xref="CDD:186036" misc_feature complement(2541394..2542278) /locus_tag="B565_2251" /note="DAHP synthetase I family; Region: DAHP_synth_1; pfam00793" /db_xref="CDD:189723" gene complement(2542631..2543914) /locus_tag="B565_2252" /db_xref="GeneID:10488169" CDS complement(2542631..2543914) /locus_tag="B565_2252" /codon_start=1 /transl_table=11 /product="3-phosphoshikimate 1-carboxyvinyltransferase" /protein_id="YP_004392904.1" /db_xref="GI:330829952" /db_xref="GeneID:10488169" /translation="MNSLRLEPISRVAGEVNLPGSKSVSNRALLLAALARGTTRLTNL LDSDDIRHMLAALTQLGVKYKLSADKTECTVQGLGRSFAVKEPVNLFLGNAGTAMRPL CAALCLGSGEYTLGGEPRMEERPIGHLVDALREAGAHIQYLKHDGYPPLVVDAKGLWG GDVHVDGSVSSQFLTAFLMAAPMAAGDTRIHIKGELVSKPYIDITLHIMKQFGVVIEH DNYKLFYIKGNQTYISPGDFLVEGDASSASYFLAAGAIKGKVRVTGIGKHSIQGDIHF ADVLEKMGARITWGDDFIEAEQAPLHGVDMDMNHIPDAAMTIAVAALFAEGPTSIRNI YNWRVKETDRLHAMATELRKLGVEVEEGHDFITVTPPTQLKHAEIDTYNDHRIAMCFS LVALSDTPVTINDPKCTSKTFPDYFDKLASISQRG" misc_feature complement(2542637..2543914) /locus_tag="B565_2252" /note="3-phosphoshikimate 1-carboxyvinyltransferase; Provisional; Region: PRK02427" /db_xref="CDD:179423" misc_feature complement(2542646..2543881) /locus_tag="B565_2252" /note="EPSP synthase domain. 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EC 2.5.1.19) catalyses the reaction between shikimate-3-phosphate (S3P) and phosphoenolpyruvate (PEP) to form 5-enolpyruvylshkimate-3-...; Region: EPSP_synthase; cd01556" /db_xref="CDD:30129" misc_feature complement(order(2543186..2543197,2543852..2543863)) /locus_tag="B565_2252" /note="hinge; other site" /db_xref="CDD:30129" misc_feature complement(order(2542682..2542684,2542757..2542762, 2542883..2542885,2542892..2542897,2542907..2542909, 2542976..2542978,2543312..2543314,2543321..2543323, 2543399..2543407,2543543..2543545,2543624..2543629, 2543633..2543635,2543834..2543836,2543846..2543851)) /locus_tag="B565_2252" /note="active site" /db_xref="CDD:30129" gene complement(2544142..2545230) /locus_tag="B565_2253" /db_xref="GeneID:10488170" CDS complement(2544142..2545230) /locus_tag="B565_2253" /codon_start=1 /transl_table=11 /product="phosphoserine aminotransferase" /protein_id="YP_004392905.1" /db_xref="GI:330829953" /db_xref="GeneID:10488170" /translation="MSKQIYNFCAGPAMLPVEVMERAQREFCNFQGLGASVMELSHRG KPYMAVAEKAEADLRELLAVPDNYKVLFMHGGGRGQFSAVPMNLLGGANKKADFLLTG VWSQSAVDEAKKYGDIQTFQGVAKNEQGVSHLLPTPAFRADAAYVHYCPNETIDGIEM FDIPATGEVPLVADLSSTILSRPLDVSRFGIIYAGAQKNIGPSGLAIAIVRDDLLDQA RADVPSIFDYKLTAKNDSMFNTPPTYAWYLAGLVFEWLKEQGGLEAMEARNKEKADFL YDYLDQSSFYGNQVDVSCRSRMNIPFQLKNAELDKQFLAESEAAGLLALKGHRIVGGM RASIYNAMPLEGVKALVSFMDGFAKRNG" misc_feature complement(2544154..2545215) /locus_tag="B565_2253" /note="Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active...; Region: PSAT_like; cd00611" /db_xref="CDD:99736" misc_feature complement(order(2544508..2544516,2544622..2544624, 2544886..2544891,2544898..2544900,2544997..2544999, 2545006..2545011,2545186..2545188,2545192..2545197, 2545210..2545212)) /locus_tag="B565_2253" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99736" misc_feature complement(order(2544247..2544249,2544637..2544642, 2544709..2544711,2544769..2544771,2544919..2544921, 2544997..2545002,2545201..2545203)) /locus_tag="B565_2253" /note="substrate-cofactor binding pocket; other site" /db_xref="CDD:99736" misc_feature complement(order(2544637..2544642,2544703..2544705, 2544709..2544711,2544769..2544771,2544919..2544921, 2544997..2545005)) /locus_tag="B565_2253" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99736" misc_feature complement(2544637..2544639) /locus_tag="B565_2253" /note="catalytic residue [active]" /db_xref="CDD:99736" gene 2545249..2545425 /locus_tag="B565_2254" /db_xref="GeneID:10488171" CDS 2545249..2545425 /locus_tag="B565_2254" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392906.1" /db_xref="GI:330829954" /db_xref="GeneID:10488171" /translation="MRVIDDLSGFTQEQPADQRLFGSWLNLLPSLCIPLAGEKALNGS GLAGNMHRNGGQSA" gene complement(2545456..2546382) /locus_tag="B565_2255" /db_xref="GeneID:10488172" CDS complement(2545456..2546382) /locus_tag="B565_2255" /codon_start=1 /transl_table=11 /product="electron transfer flavoprotein subunit alpha" /protein_id="YP_004392907.1" /db_xref="GI:330829955" /db_xref="GeneID:10488172" /translation="MSVLIIAEHHQGHLADNVAQLVTAAGSIGGQVDLLLLGQGLTEA GEQAAALSGVDKVLLAEHPLLADGLLDGVDKLLACWCEGYSHCLMAASAMGKALLPQV AARLGVEMLSEVTAIESRDTFLRPIYAGNAIARVASSAPVKLMTVRATAFAKAATGGQ ALIEHLAVPEFAGRTRLVERRAVRSSRPELTAARVVVSGGRALGSKAQFALIEALADK LGGAVGASRAAVDAGYVANDLQVGQTGKVVAPELYIAVGISGAIQHLAGMKESKVIVA INKDSDAPIFQVADYGLVGDLFTLLPELTAKL" misc_feature complement(2545459..2546379) /locus_tag="B565_2255" /note="electron transfer flavoprotein subunit alpha; Provisional; Region: PLN00022" /db_xref="CDD:177660" misc_feature complement(2545882..2546379) /locus_tag="B565_2255" /note="The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an...; Region: ETF_alpha; cd01715" /db_xref="CDD:30170" misc_feature complement(2545567..2545824) /locus_tag="B565_2255" /note="Electron transfer flavoprotein FAD-binding domain; Region: ETF_alpha; pfam00766" /db_xref="CDD:189709" gene complement(2546379..2547146) /locus_tag="B565_2256" /db_xref="GeneID:10488173" CDS complement(2546379..2547146) /locus_tag="B565_2256" /codon_start=1 /transl_table=11 /product="electron transfer flavoprotein subunit beta" /protein_id="YP_004392908.1" /db_xref="GI:330829956" /db_xref="GeneID:10488173" /translation="MKLLVAIKRVVDYNVKIRVKGDGSDVELANVKMGINPFCEIAVE EGVRLREAGVASELVVVTFGPDAAAEQLRHGLALGADRALHYITGESVTDETLTPLTV ARALRKVCEQEQPDLVLLGKQSIDSDNNQVAQMLAALNDWPLATCASALKVEAGELLV TREIDGGLETLGMPLPAVVSADLRLNEPRFASLPNIMKAKRKPLDSAPFSTLAVEVAN QTRLLGVMAPPARSAGIKVGSVDELVDKLKHEAKVLP" misc_feature complement(2546532..2547143) /locus_tag="B565_2256" /note="The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an...; Region: ETF_beta; cd01714" /db_xref="CDD:30169" misc_feature complement(order(2546751..2546762,2546775..2546780, 2546784..2546789,2546958..2546960,2547030..2547032, 2547039..2547041,2547126..2547131)) /locus_tag="B565_2256" /note="Ligand binding site [chemical binding]; other site" /db_xref="CDD:30169" gene 2547331..2548959 /locus_tag="B565_2257" /db_xref="GeneID:10488174" CDS 2547331..2548959 /locus_tag="B565_2257" /codon_start=1 /transl_table=11 /product="Electron transfer flavoprotein-ubiquinone oxidoreductase" /protein_id="YP_004392909.1" /db_xref="GI:330829957" /db_xref="GeneID:10488174" /translation="MEFDVVIVGGGPAGLSAAIALKQQDATLSVCLLEKGAEIGAHLL SGALFDPVALQELLPDGWQQAPLGVPVSDDQVHLLQSEQRSLQLPAWAVPPRMHNEGC HIISLGNLCRWLGQQAEKLGVEIYPGFTASELIMEAGRVKGVITGDLGLDRAGNPKAD YVPGMALLGRYTLFAEGARGHLGKQLIADFNLASPAQPQHYAIGFKELWQLPAGQGKA GQVLHGSGWPLGKQGGGNSHGGFYLYHMEGDQVAVGLIVDLNYQNPWLSPFDEFQRLK HHPLIAGVLQGGERISYGARAITKGGWHALPRMHFPGGLLIGCDAGTLDFSRIKGIHT AMKSGMLAAKTVAMALRGGDEGGRDLAQYGDELHQSWLARELKAARNFGAALHRYGPW LGGAFNWLEQRLFGANSPFKLLDKAHDYRQLRVASRCEPIHYPKPDGRLSFDKLSSVY LANTSHDEDQPCHLKLQDERIPVEVNLPTWAEPAQRYCPAGVFEVLEMEGAAKLQINA ANCIHCKTCDIKDPSQNIIWTPPQGGSGPNYPNM" misc_feature 2547331..2548698 /locus_tag="B565_2257" /note="Dehydrogenases (flavoproteins) [Energy production and conversion]; Region: FixC; COG0644" /db_xref="CDD:30989" misc_feature 2547334..2548488 /locus_tag="B565_2257" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 2548498..2548821 /locus_tag="B565_2257" /note="Electron transfer flavoprotein-ubiquinone oxidoreductase; Region: ETF_QO; pfam05187" /db_xref="CDD:147396" gene 2549253..2550200 /locus_tag="B565_2258" /db_xref="GeneID:10488175" CDS 2549253..2550200 /locus_tag="B565_2258" /codon_start=1 /transl_table=11 /product="Magnesium and cobalt transport protein CorA" /protein_id="YP_004392910.1" /db_xref="GI:330829958" /db_xref="GeneID:10488175" /translation="MITAYILNNKVLDIVTLGPDDIVPDNTVWLDAYKPDTAEREWLT GLFLEEVPDKEELDDIEASARFYWDTDGLHIHSLFPQRIGRDTKGVHVSFTLRNNLLI SIREDDIGLVRLLRHYMRQDRLEVEDALDILLEVQNLKVEYLSDLIEDGYKTLENTAD QIFEPDQINPMLKELMAQEEANGQIRLSLHDTRRALRFLKRSLRQRMSLEQNKWIDEM LHDVESLLPHTQFLFDKINFQLEASMGVTNLEQNKVIKIFSVAAVIFLPPTLIASIYG MNFGRMPELAWEYGYPMSLVLMVMSSLGTGLFFKRKGWL" misc_feature 2549253..2550197 /locus_tag="B565_2258" /note="Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]; Region: CorA; COG0598" /db_xref="CDD:30943" misc_feature 2549253..2550197 /locus_tag="B565_2258" /note="magnesium/nickel/cobalt transporter CorA; Provisional; Region: PRK11085; cl00459" /db_xref="CDD:187900" gene 2550349..2550810 /locus_tag="B565_2259" /db_xref="GeneID:10488176" CDS 2550349..2550810 /locus_tag="B565_2259" /codon_start=1 /transl_table=11 /product="inner membrane protein YfeZ" /protein_id="YP_004392911.1" /db_xref="GI:330829959" /db_xref="GeneID:10488176" /translation="MTLYPEHRYDDHGQLRPPLWFWPIALLLTRSVWLFLMAGVTRES GSEILTLFYPDKITLYISLLTDVPAILALLACGGTYQQTQSIRARLRRHSPLLLLCSA VSGLLMQLHSLNLQKWSFSWPTALVLVASLWALWYLLRSRQLREYAADQPH" misc_feature 2550358..2550807 /locus_tag="B565_2259" /note="Protein of unknown function (DUF2919); Region: DUF2919; pfam11143" /db_xref="CDD:151587" gene complement(2550823..2551593) /locus_tag="B565_2260" /db_xref="GeneID:10488177" CDS complement(2550823..2551593) /locus_tag="B565_2260" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392912.1" /db_xref="GI:330829960" /db_xref="GeneID:10488177" /translation="MVWMGKVGRRALLWLGCMMGLWSPSLWAEVKVIPVFEAQAAVQT LKEIYPQLGVSAMGNQLVLSGTPAQLQEAEATLAQVNQPPQSLLIEWRVDGAASGQQL GGSISRDEAKRQWLVDGNAQQYQRSQNDSWQVRGLSGRPVLLQMGSYQPVTFYQWNGG AVVGMMPLVNGLYATATLIGDRVQIALSSEQARLDQGTINRGQSATEVSGAPGQWLTV GELSTSSADQGSSLGTQLQGGRGSQSERQTLQIRVTRQ" gene 2551824..2552375 /locus_tag="B565_2261" /db_xref="GeneID:10488178" CDS 2551824..2552375 /locus_tag="B565_2261" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="YP_004392913.1" /db_xref="GI:330829961" /db_xref="GeneID:10488178" /translation="MLKQLLLLLLALLLGACSLTQYNVSEAEINQYLKDQVSFEKQLG IPGIMSSKIRLDEMQSRIGRKQADRIELDAAGDLQVSSPLGSQQMKIRFALSARPDYV ADQGAIYLRDLELVSVKTEPADIGAALTPLLPTFNQSLSLFLSQTPVYRLDSSRKNEA RIKEKVEALKVEPGRLVIPFKLL" misc_feature 2551866..2552369 /locus_tag="B565_2261" /note="Protein of unknown function (DUF1439); Region: DUF1439; cl06345" /db_xref="CDD:195292" gene 2552571..2554568 /locus_tag="B565_2262" /db_xref="GeneID:10488179" CDS 2552571..2554568 /locus_tag="B565_2262" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392914.1" /db_xref="GI:330829962" /db_xref="GeneID:10488179" /translation="MRKTVLVQAIACALISGAAHAAVKVEDKTFNTAANMLAYTEFEL SGEPLAEALGLDLDVLDANRADEPTPFDFAAGIESYEYSEEAMYALNYQSGMGPHLVN GPQNLARGGTMVSLGQRVLAMADAVGFPADEVPQGMYPLSLPYASANPEFAQAVNATP VNGDQITIKTAKGTEKTVKTQVPAYFRDYSTLRWSGSDNLLVPAAVGGILLKEVMWSQ DFLGGMHVAESDEEVEAASATMDQDGKHKLGVSAADGFNGMMLTEQSIDKLTIMQNQL GFDGKQLGAKITPQYDPAKGVVYFPHQVKVTETSNNDAGAIGKLEVVDGSAQLRDAWM MLWPLSEFYAFSDQRSANTNQNPAFHAVFDGAPFAAAPAANKTNDLGNAVAGSDAFSL AINLSNLTFKNLAALHFDAKSGTLVDSWQASKQGKHVTTFDAAYALVALQIFQRAQDA LPVGYAAGDNGELNLKTRQGQQALELIRKQADFILANLKGKNGLVHDGITLGGKLDAG HSIDAQFAAIRGLTAAFLATSDAKYRTAARELFIAADKAYFNAKAGTWLAGKQGEYTP WTQAAISGALRSAMLNLRNEGAEKAPELELAKLTGQYVSWFRGTVNGGMQMAEWIGDS GENIIEGAGSDTDEDGVPQVTAAGGKHGTAMVMAAKAVVSE" misc_feature <2553987..2554319 /locus_tag="B565_2262" /note="Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]; Region: COG1331" /db_xref="CDD:31522" gene complement(2554653..2555927) /locus_tag="B565_2263" /db_xref="GeneID:10488180" CDS complement(2554653..2555927) /locus_tag="B565_2263" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate adenylyltransferase" /protein_id="YP_004392915.1" /db_xref="GI:330829963" /db_xref="GeneID:10488180" /translation="MLLEPENSAKARQLLNQSMALVLAGGRGSRLKQLTDNRAKPAVH FGGKFRIIDFVLSNCINSGIRRVGVVTQYKSHSLLRHLQSGWSFLRYQMNEFIDLLPA QQRVDEVHWYRGTADAIYQNVDIIRDYGPKYLVVLAGDHIYKMDYAAMLLDHVRLGAK VTVACIEVPRAEASAFGIMDIDEQRKIRAFVEKPANPPAMPGCEDRSLASMGIYIFEA EYLYQLLEEDIHNQDSKHDFGMDVIPRIVEEGMAFAHPFNMSCVGAREGQKPYWRDVG TLDSFWEANMDLASVLPELDIYDQNWPIWTSQTLTPPAKFVQDRNGQHGMTINSMFSG GTIVSGSFVLNSVLFTNVRVHSFCTLDQAIIFPGVEIGAGCRLRRVVVDKGCVLPDGL VVGENADEDSRRFYRSEQGIVLVTKEMLDKLV" misc_feature complement(2554656..2555897) /locus_tag="B565_2263" /note="glucose-1-phosphate adenylyltransferase; Provisional; Region: glgC; PRK00725" /db_xref="CDD:179099" misc_feature complement(2555103..2555870) /locus_tag="B565_2263" /note="ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch; Region: ADP_Glucose_PP; cd02508" /db_xref="CDD:133002" misc_feature complement(order(2555208..2555213,2555217..2555219, 2555508..2555513,2555583..2555585,2555589..2555591, 2555850..2555855,2555859..2555861)) /locus_tag="B565_2263" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:133002" misc_feature complement(order(2555541..2555546,2555556..2555558, 2555562..2555564,2555616..2555618,2555625..2555627, 2555634..2555636,2555691..2555693,2555700..2555702)) /locus_tag="B565_2263" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:133002" misc_feature complement(2554668..2554973) /locus_tag="B565_2263" /note="Glucose-1-phosphate adenylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Glucose-1-phosphate adenylyltransferase is also known as ADP-glucose synthase or ADP-glucose pyrophosphorylase. It catalyzes the first committed and rate-...; Region: LbH_G1P_AT_C; cd04651" /db_xref="CDD:100056" misc_feature complement(2554932..2554970) /locus_tag="B565_2263" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:100056" misc_feature complement(order(2554674..2554676,2554779..2554781, 2554878..2554880,2554887..2554889,2554893..2554895, 2554926..2554931,2554941..2554943)) /locus_tag="B565_2263" /note="N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:100056" misc_feature complement(order(2554677..2554679,2554776..2554781)) /locus_tag="B565_2263" /note="sulfate 1 binding site; other site" /db_xref="CDD:100056" gene 2556054..2557757 /locus_tag="B565_2264" /db_xref="GeneID:10488181" CDS 2556054..2557757 /locus_tag="B565_2264" /codon_start=1 /transl_table=11 /product="GGDEF/eal domain-containing protein" /protein_id="YP_004392916.1" /db_xref="GI:330829964" /db_xref="GeneID:10488181" /translation="MLCSASLVKIPPQSSHFKDDKMVHKLGRTLFLIATIVTIPLLLL QAVWLALQSTPLTLAIILATTLLGMILLLMLAIRTMDGMLQHQELIWVKAIRGRDPSQ LDEPASQEVLQQLLEQFESAEQSAHRQLTELSNLATTDELTQLLNRHAFRRDMTELLQ RDQDTQTATLVLIRATELGKINAQRGFQSGDAYIKDMAALIKRVVSRFPGNQVYRISG ADFAVLVQPVANIPPHLLGQDLKVAFDHYQDQHELESTGYSGLTKLSSGQKIEAVLAR ADLALARAQTETINGWAIQQDDSASDLQGQHHWRDVLTEVLAQERLSFTYQPIQPLHR SMLAYNEIYTRFSGNDGTALPTDTLFAMAQRLDMVMRLEQLVITHIMRQYRAFGANQS RWGINLSPNLLQNSAFLIWLDRQLLKDPNTSANLVFELDEEHLERNLTGAKRVFELLR RNGSRSAIANFGKGIGSFTLFRELKPDYIKLDPALITGLEQDQTNQQFVRMIVDVSHR MGCQVIAEGVEQLGQKQLLQGMYVDGLQGYLIARPQPLRPDISQLGLFTEDASASKGS E" misc_feature 2556465..>2556728 /locus_tag="B565_2264" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(2556573..2556575,2556708..2556710) /locus_tag="B565_2264" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(2556588..2556590,2556597..2556602,2556612..2556614, 2556624..2556626,2556696..2556698,2556702..2556713) /locus_tag="B565_2264" /note="active site" /db_xref="CDD:143635" misc_feature 2556684..2556686 /locus_tag="B565_2264" /note="I-site; other site" /db_xref="CDD:143635" misc_feature 2556990..2557691 /locus_tag="B565_2264" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:30163" gene complement(2557720..2558214) /locus_tag="B565_2265" /db_xref="GeneID:10488182" CDS complement(2557720..2558214) /locus_tag="B565_2265" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392917.1" /db_xref="GI:330829965" /db_xref="GeneID:10488182" /translation="MFVFDVTGAAGEKASIRVQALDWAQVGPVTFQCDDDKLAVVLLS GCRCDAVGFFNLLAGCKPLYIEQWLSYLQESGRIGKWSHQTESPADGDYLARAGLEHD ELNTLLGQVYQVAGFNRLQINRYLKNRHNPTTLATRYDQKELERYRQLNDIILTLLKL KHPQ" gene complement(2558390..2558752) /locus_tag="B565_2266" /db_xref="GeneID:10488183" CDS complement(2558390..2558752) /locus_tag="B565_2266" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392918.1" /db_xref="GI:330829966" /db_xref="GeneID:10488183" /translation="MSMLNDNLDANFQLFIEQVRESGQVWGLRYGEDWVVCRSAEFED ADVMPLWSAEEDARLHCVDEWADYEPEVIDLEEFLDIWINDLDEDDVLVGPNWNADLE GQELEPIELAKALVELDA" misc_feature complement(2558405..2558722) /locus_tag="B565_2266" /note="Protein of unknown function (DUF2750); Region: DUF2750; pfam11042" /db_xref="CDD:192700" gene complement(2558933..2560237) /locus_tag="B565_2267" /db_xref="GeneID:10488184" CDS complement(2558933..2560237) /locus_tag="B565_2267" /codon_start=1 /transl_table=11 /product="Inosine-guanosine kinase" /protein_id="YP_004392919.1" /db_xref="GI:330829967" /db_xref="GeneID:10488184" /translation="MKFPGQRKSKHYFPVDRRDPLVPQNPLLTELGKAYVVGIDQTLV DIEAHVDEDFLTRYGLSKGHSVVINDDVAERIYDELKANNMVVSEFAGGTIGNTVHNY SVLADSHSILLGVMSQDIRIGCYAYRYLCNTSSRVNLDYLQPVDGPIGRCFTFITECG ERSFGINAGKMNQLDVQHIPEDVIKGASALVITAYLVRGDDGDPMKEAAMTAVRYARE AGIPVVLTLGTRFVIDENPQWWRDFIAENVTVLAMNEDEGEALTGIADPLGAADKALD WADMVLCTAGPIGLYMASYTDEDYKRETTHTLLPGVIPEFNMYEFSRPMARAKCRKPA RIYSHISPYMGGPEKIKNTNGAGDGALSAVLHDMVANSYHRMNVPNSAKHISEFLTYS SLAQVCKYANRVSYEVLAQSSPRLSRGLPEKEDSLEEVYWER" misc_feature complement(2558987..2560132) /locus_tag="B565_2267" /note="ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-...; Region: ribokinase_pfkB_like; cl00192" /db_xref="CDD:193700" misc_feature complement(order(2559164..2559166,2559173..2559175, 2559947..2559949)) /locus_tag="B565_2267" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73186" misc_feature complement(order(2559158..2559160,2559167..2559172, 2559179..2559181,2559386..2559388,2559476..2559478)) /locus_tag="B565_2267" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73186" gene complement(2560424..2560816) /locus_tag="B565_2268" /db_xref="GeneID:10488185" CDS complement(2560424..2560816) /locus_tag="B565_2268" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392920.1" /db_xref="GI:330829968" /db_xref="GeneID:10488185" /translation="MVHITLIYAGLLGLLFLGLSFWVVKRRAQFGVMIGQGEAPELLA AIRAHGNFAEYVPLTLLLMALCELSGAGALWLHTGGAMLLVGRILHAIGIQIPKAPNV PRFLGTLLFWLALGLFSLLALFQGMAAA" misc_feature complement(<2560535..2560810) /locus_tag="B565_2268" /note="MAPEG family; Region: MAPEG; cl09190" /db_xref="CDD:195815" gene complement(2560851..2561825) /locus_tag="B565_2269" /db_xref="GeneID:10488186" CDS complement(2560851..2561825) /locus_tag="B565_2269" /codon_start=1 /transl_table=11 /product="ferrochelatase" /protein_id="YP_004392921.1" /db_xref="GI:330829969" /db_xref="GeneID:10488186" /translation="MTTKTGILLVNLGTPAAPTTAAVKAFLSQFLHDPRVVDLPRYLW CPLLHFIILPTRSPKVAKLYQQVWTEQGSPLMVISKQQRAALEQELKREGVEVPVELA MTYGSPSVNDGWQALKAKGVNRVILLPLYPQYSVSTTASVFDAWGKAMKRERNLPVVR LIRDYHAHPEYIQALAMSVRRHWEQHGQGDHLLMSFHGIPERYENEGDPYGHQCRHTA SLLAEALGLEAGQWTASFQSRFGKEEWLKPYTDVTIGGMPAAGIKRLDVICPAFAADC LETLEEIQVQNREIFMEAGGERFEYIPALNSDQAHIRMMVSLICRELA" misc_feature complement(2560854..2561825) /locus_tag="B565_2269" /note="ferrochelatase; Reviewed; Region: hemH; PRK00035" /db_xref="CDD:178811" misc_feature complement(2561322..2561813) /locus_tag="B565_2269" /note="Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is...; Region: Ferrochelatase_N; cd03411" /db_xref="CDD:48638" misc_feature complement(order(2561328..2561330,2561334..2561336, 2561418..2561429,2561436..2561438,2561580..2561582, 2561592..2561594,2561625..2561627,2561637..2561639, 2561793..2561795)) /locus_tag="B565_2269" /note="C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:48638" misc_feature complement(order(2561412..2561417,2561730..2561738, 2561748..2561750,2561790..2561792)) /locus_tag="B565_2269" /note="active site" /db_xref="CDD:48638" misc_feature complement(2560908..2561309) /locus_tag="B565_2269" /note="Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is...; Region: Ferrochelatase_C; cd00419" /db_xref="CDD:73203" misc_feature complement(order(2560992..2560994,2561091..2561093, 2561220..2561222,2561235..2561237)) /locus_tag="B565_2269" /note="active site" /db_xref="CDD:73203" misc_feature complement(order(2560908..2560910,2560983..2560985, 2560995..2560997,2561001..2561009,2561013..2561015, 2561175..2561177,2561187..2561189,2561196..2561204)) /locus_tag="B565_2269" /note="N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:73203" gene complement(2561924..2562568) /locus_tag="B565_2270" /db_xref="GeneID:10488187" CDS complement(2561924..2562568) /locus_tag="B565_2270" /codon_start=1 /transl_table=11 /product="adenylate kinase" /protein_id="YP_004392922.1" /db_xref="GI:330829970" /db_xref="GeneID:10488187" /translation="MRIVLLGAPGAGKGTQAQFIMEKHGIPQISTGDMLRAAIKAGTE LGLKAKAVMDAGQLVSDDIIIGLVKERIAQPDCAKGFLLDGFPRTIPQAQAMKDAGVV VDFVLEFDVPDEEIVKRMSGRRVHSGSGRTYHVVFNPPKVEGKDDVTGEDLVIRADDE ETTVRKRLDVYHQQTAPLIGFYGKEAEAGHTRYVKIDGTQPVDLVSKQLATILG" misc_feature complement(2561927..2562568) /locus_tag="B565_2270" /note="adenylate kinase; Reviewed; Region: adk; PRK00279" /db_xref="CDD:178957" misc_feature complement(2561954..2562565) /locus_tag="B565_2270" /note="Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (ATP) to adenosine monophosphates (AMP) and to yield adenosine diphosphates (ADP). This enzyme is required for the biosynthesis of ADP and is essential for...; Region: ADK; cd01428" /db_xref="CDD:30189" misc_feature complement(order(2562293..2562295,2562305..2562310, 2562314..2562319,2562392..2562394,2562461..2562463, 2562476..2562478)) /locus_tag="B565_2270" /note="AMP-binding site [chemical binding]; other site" /db_xref="CDD:30189" misc_feature complement(order(2562056..2562058,2562068..2562070, 2562200..2562202,2562305..2562307,2562317..2562319, 2562461..2562463)) /locus_tag="B565_2270" /note="ATP-AMP (Ap5A)-binding site [chemical binding]; other site" /db_xref="CDD:30189" gene complement(2562872..2563630) /locus_tag="B565_2271" /db_xref="GeneID:10488188" CDS complement(2562872..2563630) /locus_tag="B565_2271" /codon_start=1 /transl_table=11 /product="tRNA-(Ms[2]io[6]A)-hydroxylase" /protein_id="YP_004392923.1" /db_xref="GI:330829971" /db_xref="GeneID:10488188" /translation="MDDLLAPVRQFLQCETPDEWVEMARDPARLPTLLIDHANCETKA ALTAHSLVRRYCLPKGKRHLLPKLEFYRELDAIPEKAEILGKRSMGESDRTVFAELER NPLLFPMVRLIQEELHHFEQVLEIMQARGIEYGPVTASRYARQLMQHVRTHEPATIVD KMIIGAYIEARSCERFAKLAPHLDEELSRFYISLLRSEARHYQDYLSLAEQYAGEDIS ERVAFFGKLEAELICSPDPQFRFHSGLPVTSDSC" misc_feature complement(2562932..2563600) /locus_tag="B565_2271" /note="MiaE tRNA-modifying nonheme diiron monooxygenase, ferritin-like diiron-binding domain; Region: MiaE; cd07910" /db_xref="CDD:153119" misc_feature complement(order(2563016..2563018,2563028..2563030, 2563037..2563039,2563124..2563126,2563139..2563141, 2563148..2563150,2563190..2563192,2563274..2563276, 2563283..2563285,2563508..2563510)) /locus_tag="B565_2271" /note="active site" /db_xref="CDD:153119" misc_feature complement(order(2563028..2563030,2563037..2563039, 2563124..2563126,2563274..2563276,2563283..2563285, 2563508..2563510)) /locus_tag="B565_2271" /note="dinuclear metal binding site [ion binding]; other site" /db_xref="CDD:153119" misc_feature complement(order(2563268..2563273,2563280..2563282, 2563289..2563291,2563298..2563303,2563310..2563312, 2563475..2563477,2563484..2563486,2563505..2563507)) /locus_tag="B565_2271" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:153119" gene complement(2563836..2565356) /locus_tag="B565_2272" /db_xref="GeneID:10488189" CDS complement(2563836..2565356) /locus_tag="B565_2272" /codon_start=1 /transl_table=11 /product="amidophosphoribosyltransferase" /protein_id="YP_004392924.1" /db_xref="GI:330829972" /db_xref="GeneID:10488189" /translation="MCGIVGIVGTTPVNQALYDALTVLQHRGQDAAGIVTIDSGNFRQ RKANGLVKDVFEVRHMQRLQGNIGIGHVRYPTAGSSSAAEAQPFYVNSPYGMVLAHNG NLTNAKELKEQQFKVARRHINTTSDSEVLLNVLAHELDRCDKMALRPEDIFAAVRRTH QQIRGAYAVVSLVIGHGLIGFRDPNGIRPLILGRRQDEQGQVEYMLASESVALDAIGF ETVRDIAPGEAIYITEQGQLFSEQCAENPQMSSCIFEYVYFARPDSCIDKVSVYAARL NMGRKLGQKIAREWEDLDVDVVIPIPETSCDVALEIAHTLDLPYRQGFVKNRYIGRTF IMPGQTQRKKSVRRKLNAISSEFKGKKVLLVDDSIVRGTTSEQIIQMAREAGAAKVYF ASAAPEIRFPNVYGIDMPTANELIAHGREVEEVCKLIGADGLIFQDLEDLEAAVREIN PDLRHFETSVFNGHYVTSDVDQSYLDHLNALRNDDTKAVREWQEGTSNLEIFNEGS" misc_feature complement(2563842..2565356) /locus_tag="B565_2272" /note="amidophosphoribosyltransferase; Provisional; Region: PRK09246" /db_xref="CDD:181724" misc_feature complement(2564556..2565353) /locus_tag="B565_2272" /note="Glutamine amidotransferases class-II (GN-AT)_GPAT- type. This domain is found at the N-terminus of glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase) . The glutaminase domain catalyzes amide nitrogen transfer from glutamine to the...; Region: GPATase_N; cd00715" /db_xref="CDD:48479" misc_feature complement(order(2564976..2564978,2565051..2565056, 2565138..2565140,2565273..2565278,2565351..2565353)) /locus_tag="B565_2272" /note="active site" /db_xref="CDD:48479" misc_feature complement(order(2564946..2564951,2564958..2564963, 2564970..2564972,2565087..2565089,2565270..2565272, 2565291..2565293,2565300..2565305)) /locus_tag="B565_2272" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:48479" misc_feature complement(2564178..2564543) /locus_tag="B565_2272" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene complement(2565378..2565866) /locus_tag="B565_2273" /db_xref="GeneID:10488190" CDS complement(2565378..2565866) /locus_tag="B565_2273" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase subunit beta" /protein_id="YP_004392925.1" /db_xref="GI:330829973" /db_xref="GeneID:10488190" /translation="MVWIDYAIIGIVGFSALISLVRGFVKEAMSLVTWFVAFFIASHF YPDLAVYFTSFSDALVRNGLAIAALFVATLILGSVVNYVVGLLVDKTGLSGTDRVLGV CFGAIRGVLIVSALLFFMDTFTSLSQSDWWVASKLVPEFKPVIQWFFGFMLNSSSFLK QV" misc_feature complement(2565381..2565866) /locus_tag="B565_2273" /note="Colicin V production protein; Region: Colicin_V; cl00567" /db_xref="CDD:193873" gene complement(2566054..2567349) /locus_tag="B565_2274" /db_xref="GeneID:10488191" CDS complement(2566054..2567349) /locus_tag="B565_2274" /codon_start=1 /transl_table=11 /product="serine tRNA synthetase" /protein_id="YP_004392926.1" /db_xref="GI:330829974" /db_xref="GeneID:10488191" /translation="MLDPKYLRSDIEEAAARLATRGYVLDVAAVNALEEKRKDLQSRT QELQAERNARSKSIGEAARRGEDVAPLKAEVTKINDELETSKVELDALLAQLKAIADA IPNLPSETTPVGRDENDNVEVRRWGTPREFSFPVRDHIDLGEAAKGVDFKNGVKLSGT RFVVMKGQIARLHRALAQFMLDLHTQQHGYTECYVPYLVNPDSLYGTGQLPKFAQDLF NTGIEGEGEEEGKLRKFSLIPTSEVPLTNMARDEIFDAQELPIKMTAHSPCFRSEAGS YGRDTRGLIRMHQFDKVEMVQLVHPEKSWDALEEMVGHAEKVLQLLELPYRVMALSTG DMGFCASKTYDLEVWLPAQNTYREISSVSNCTDFQARRMQARVRIDGKPQLLHTLNGS GLAVGRTLVAVMENYQQEDGRIAIPAALQSYMGGLTHIG" misc_feature complement(2566057..2567349) /locus_tag="B565_2274" /note="seryl-tRNA synthetase; Provisional; Region: PRK05431" /db_xref="CDD:180077" misc_feature complement(2567029..2567349) /locus_tag="B565_2274" /note="Seryl-tRNA synthetase N-terminal domain; Region: Seryl_tRNA_N; pfam02403" /db_xref="CDD:145510" misc_feature complement(2566078..2566995) /locus_tag="B565_2274" /note="Seryl-tRNA synthetase (SerRS) class II core catalytic domain. SerRS is responsible for the attachment of serine to the 3' OH group of ribose of the appropriate tRNA. This domain It is primarily responsible for ATP-dependent formation of the enzyme...; Region: SerRS_core; cd00770" /db_xref="CDD:29815" misc_feature complement(order(2566078..2566083,2566483..2566485, 2566546..2566548,2566594..2566596,2566606..2566608, 2566618..2566620,2566675..2566677,2566687..2566689, 2566693..2566698,2566750..2566752,2566756..2566764, 2566768..2566779,2566816..2566818,2566825..2566827, 2566831..2566833,2566837..2566839,2566849..2566869, 2566876..2566893)) /locus_tag="B565_2274" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29815" misc_feature complement(order(2566156..2566158,2566174..2566176, 2566180..2566182,2566267..2566278,2566468..2566470, 2566474..2566476,2566480..2566482,2566489..2566491, 2566495..2566497,2566504..2566506,2566513..2566515, 2566531..2566533,2566537..2566539,2566624..2566626, 2566630..2566632,2566870..2566872)) /locus_tag="B565_2274" /note="active site" /db_xref="CDD:29815" misc_feature complement(2566756..2566779) /locus_tag="B565_2274" /note="motif 1; other site" /db_xref="CDD:29815" misc_feature complement(2566531..2566542) /locus_tag="B565_2274" /note="motif 2; other site" /db_xref="CDD:29815" misc_feature complement(order(2566156..2566158,2566165..2566173)) /locus_tag="B565_2274" /note="motif 3; other site" /db_xref="CDD:29815" gene complement(2567656..2568993) /locus_tag="B565_2275" /db_xref="GeneID:10488192" CDS complement(2567656..2568993) /locus_tag="B565_2275" /codon_start=1 /transl_table=11 /product="ATPase" /protein_id="YP_004392927.1" /db_xref="GI:330829975" /db_xref="GeneID:10488192" /translation="MSNLSLDFSSDFRPLAARMRPQNLDQYIGQQHILGADKPLRKAI LAGHCHSMILWGPPGTGKTTLAELMAHYCQAEVERLSAVTSGIKEIRAAIDKAKENSW RGVRTILFVDEVHRFNKSQQDVFLPHIEDGTITFIGATTENPSFELNNALLSRARVYL LKRLEESDILAMLDQAMTDPRGLNDPALTFAPGVKEALAKAVDGDGRKSLNYLELLAD MAETDSAGARVIDSALLAAVVGEHVARFDKGGDHFYDLISAVHKSIRGSAPDAALYWY ARMVSAGCDPLYIARRLLAIASEDVGNADPRAMQVALSAWDCFHRIGPAEGERAIAQA IVYLACAPKSNAVYTAWKAALHDAKNLPDFEVPVHLRNAPTKLMSDLGYGAEYRYAHD EPGAYAAGEQYFPPELAGKQYYQPTDRGLEKQIGQKLDYLHELDRQSPQQRGK" misc_feature complement(2567698..2568954) /locus_tag="B565_2275" /note="recombination factor protein RarA; Reviewed; Region: PRK13342" /db_xref="CDD:183986" misc_feature complement(2568529..2568912) /locus_tag="B565_2275" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(2568805..2568828) /locus_tag="B565_2275" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(2568571..2568573,2568658..2568660, 2568802..2568825)) /locus_tag="B565_2275" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(2568655..2568672) /locus_tag="B565_2275" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(2568529..2568531) /locus_tag="B565_2275" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature complement(2567692..2568198) /locus_tag="B565_2275" /note="MgsA AAA+ ATPase C terminal; Region: MgsA_C; cl13440" /db_xref="CDD:196613" gene complement(2569070..2569690) /locus_tag="B565_2276" /db_xref="GeneID:10488193" CDS complement(2569070..2569690) /locus_tag="B565_2276" /codon_start=1 /transl_table=11 /product="outer-membrane lipoprotein carrier protein" /protein_id="YP_004392928.1" /db_xref="GI:330829976" /db_xref="GeneID:10488193" /translation="MKSVMKKQLLMGTVLLMASSQVWADAASDLKQKLAGVSLFSAKF AQTVYDSKGKELQKASGDLLVQRPNRFNWHTTSPDESLIVADGQDVWVYDPFVEQVTA LKLKDAVLNTPFILIAGNDDKFWKNYDVTKEGDVYTVTSRNKDELIASFRVTFDRQDN ISRFDVKEAQGQWSEFTLSSFNRKPVLKGNEFVFKIPKGVELDDQR" misc_feature complement(2569073..2569678) /locus_tag="B565_2276" /note="Outer membrane lipoprotein carrier protein LolA; Region: LolA; cl01065" /db_xref="CDD:194024" misc_feature complement(2569076..2569651) /locus_tag="B565_2276" /note="lipoprotein chaperone; Reviewed; Region: lolA; PRK00031" /db_xref="CDD:178807" gene complement(2569759..2572275) /locus_tag="B565_2277" /db_xref="GeneID:10488194" CDS complement(2569759..2572275) /locus_tag="B565_2277" /codon_start=1 /transl_table=11 /product="FtsK/SpoIIIE family protein" /protein_id="YP_004392929.1" /db_xref="GI:330829977" /db_xref="GeneID:10488194" /translation="MADKKLFTPLSGTQRIFEAVLIAITLMAAYLLLALLSYHPADPG WSQTSWQGEVKNLAGSAGAWLADITMFTFGAFSYLVPPLVVLLGWSLFWRPSRLLDVD YLTLGVRIIGFILTVLGMSAIASMNFNDMQNFSAGGLVGDVIASAVVPLFGGVGANLM LLCFVATGITLFTGWSWLTIVEQIGAACTGSVSAVYHFPTTLGRWLTGGWRQPRNEGP DPLLEGGVGAIAFDDEEDEPHTSWTRKPKAKNQKAAAEEWLPELDDDTFEFDPQFDDE DDESAPAAKPKRAVAAANGRRQPVLAVADDDDEDDLDLPWAEGDDEVAAPVAVAPTKP KRRPQSTMPPLPSIELLDRPPAKTQMMSKDELDRMGRLVEAKLADYNVQAKVVGVYPG PVITRFELDLAPGMKASKITNLSRDLARSLSASSVRVVEVIPGKTYVGIELPNRVRQT VYLRETLDCDAFRDSRNPLTMGLGQDIAGEPVVVNLAKMPHLLVAGTTGSGKSVGVNT MIISMLYKSSPDDLRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVGEME RRYKLMSAVGVRNLKGYNDKVLAAIEEGEPLLDPLWRPGDSMDQMPPELEKLPHIVVV VDEFADMMMIVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIS FQVSSKIDSRTIIDQGGAESLLGMGDMLYMPAGTSNPTRVHGAFVDDHEVHKVVADWK LRGEPNYIEEILSGESGGEGGSGEYGGGGDEELDPLFDEAVAFVVESRRGSTSSVQRK FKIGYNRAARLIEQMENQGIVSSPGGNGQRDVLAPPPVRD" misc_feature complement(<2571721..2572269) /locus_tag="B565_2277" /note="DNA translocase FtsK; Provisional; Region: PRK10263" /db_xref="CDD:182344" misc_feature complement(2570278..2570922) /locus_tag="B565_2277" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(2569771..2569953) /locus_tag="B565_2277" /note="Ftsk gamma domain; Region: Ftsk_gamma; cl09645" /db_xref="CDD:158603" gene complement(2572478..2572969) /locus_tag="B565_2278" /db_xref="GeneID:10488195" CDS complement(2572478..2572969) /locus_tag="B565_2278" /codon_start=1 /transl_table=11 /product="Regulator for leucine (Or lrp) regulon and high-affinity branched-chain amino acid transport system" /protein_id="YP_004392930.1" /db_xref="GI:330829978" /db_xref="GeneID:10488195" /translation="MMEAKSRLKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPC LERVRRLERQGYIEGYAAILNPHYLDASLLVFVEITLNRGAPDVFEQFNKAVQVLEEI QECHLVSGDFDYLLKTRVSDMSAYRRLLGETLLRLPGVNDTRTYVVMEEVKQSSRLVI STR" misc_feature complement(2572481..2572969) /locus_tag="B565_2278" /note="leucine-responsive transcriptional regulator; Provisional; Region: PRK11169" /db_xref="CDD:183009" misc_feature complement(2572610..2572939) /locus_tag="B565_2278" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene 2573120..2574235 /locus_tag="B565_2279" /db_xref="GeneID:10488196" CDS 2573120..2574235 /locus_tag="B565_2279" /codon_start=1 /transl_table=11 /product="alanine dehydrogenase and pyridine nucleotide transhydrogenase" /protein_id="YP_004392931.1" /db_xref="GI:330829979" /db_xref="GeneID:10488196" /translation="MIIGVPKEIKNHEYRVGMVPASVRELTARNHTVFVQSGAGNGIG FSDADYIAVGAEILASAAEVFAKAEMIVKVKEPQPVECAMLRPGQTLFTYLHLAPDLP QTEALLKSGAICIAYETVTDGRGGLPLLAPMSEVAGRMSIQAGAQALEKSRGGSGVLL GGVPGVEPAKVVIIGGGVVGSNAARMAIGLRADVTILDNNVDTLRRLDNEFQGAAKVV YSNSETLERHLLAADLVIGGVLVPGATAPKLVRRDHIARMKPGSAIVDVAIDQGGCVE TSHATTHQDPTYIVDEVVHYCVANMPGAVARTSTVALNNATLPFIIKLAQQGYRQALL NDPNLLHGLNVMEGKLTCKEVAVAHGLAYTDPLTLLN" misc_feature 2573120..2574229 /locus_tag="B565_2279" /note="Alanine dehydrogenase [Amino acid transport and metabolism]; Region: Ald; COG0686" /db_xref="CDD:31030" misc_feature 2573129..2573530 /locus_tag="B565_2279" /note="Alanine dehydrogenase/PNT, N-terminal domain; Region: AlaDh_PNT_N; pfam05222" /db_xref="CDD:191234" gene 2574421..2575371 /locus_tag="B565_2280" /db_xref="GeneID:10488197" CDS 2574421..2575371 /locus_tag="B565_2280" /codon_start=1 /transl_table=11 /product="thioredoxin reductase" /protein_id="YP_004392932.1" /db_xref="GI:330829980" /db_xref="GeneID:10488197" /translation="MSQVTHSKLLILGSGPAGYTAAVYAARANLNPLLITGMQQGGQL TTTTEVENWPGDPEGLTGPALMERMKEHAEKFDTRILFDHINSVELTQRPFRLKGDNG EYTCDALIIATGASAKYLGLPSEEAFKGRGVSACATCDGFFYRNQEVAVIGGGNTAVE EALYLANIAKKVHLIHRRDEFRAEKILIKRLHDKIESGNIVLHTHQTLDEVLGDQMGV TGVRLRNTQDNSTSELPLMGVFIAIGHQPNTQIFDGQLEMQNGYLKVRGGLDGFATQT SIEGVFAAGDVADHNYRQAITSAGTGCMAALDAERYLDAQ" misc_feature 2574421..2575365 /locus_tag="B565_2280" /note="thioredoxin reductase; Provisional; Region: PRK10262" /db_xref="CDD:182343" misc_feature 2574865..2575083 /locus_tag="B565_2280" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" gene 2575434..2576681 /locus_tag="B565_2281" /db_xref="GeneID:10488198" CDS 2575434..2576681 /locus_tag="B565_2281" /codon_start=1 /transl_table=11 /product="response regulator protein" /protein_id="YP_004392933.1" /db_xref="GI:330829981" /db_xref="GeneID:10488198" /translation="MKQKILIVEDSLTIRRMLTQAIAQQTGLEIDAFDTLEGARHCRG EEYVVALVDLTLPDAPRGEAVNELLARGLPVVILTADISEDKRAAWLETGVLDYVMKD SRHSLQYAVSLVHRLYLNQSIEVLVVDDSRTSRHRTMAQLRKQLLQVHEASHAREAMA MLEQHPDIRLALVDYYMPDIDGISLVRMLRERYSKQQLAIIGISVSDKRGLSARYLKQ GANDFLNQPFEPEELQCRVSHNLEALEQFNSIQESANRDYLTGLYNRRYWFNEGQKWF EEHQRQQTPLALCVLDVDHFKQVNDHWGHAIGDQLLCHLTRLLTQFFPDAMIARFGGE EFAMMVPHCTVPVLIKRLEGLRQQLRQQPLSPETPLFVRASYGVISVGRISMDEALSV ADRLLYQAKNTGRDKIVSQETAI" misc_feature 2575446..2575742 /locus_tag="B565_2281" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature 2575449..2575739 /locus_tag="B565_2281" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(2575458..2575463,2575590..2575592,2575614..2575616, 2575668..2575670,2575725..2575727,2575734..2575739) /locus_tag="B565_2281" /note="active site" /db_xref="CDD:29071" misc_feature 2575590..2575592 /locus_tag="B565_2281" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(2575599..2575604,2575608..2575616) /locus_tag="B565_2281" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 2575734..2575739 /locus_tag="B565_2281" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 2575806..2576132 /locus_tag="B565_2281" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature 2575809..2576156 /locus_tag="B565_2281" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(2575818..2575823,2575953..2575955,2575977..2575979, 2576043..2576045,2576100..2576102,2576109..2576114) /locus_tag="B565_2281" /note="active site" /db_xref="CDD:29071" misc_feature 2575953..2575955 /locus_tag="B565_2281" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(2575962..2575967,2575971..2575979) /locus_tag="B565_2281" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 2576109..2576117 /locus_tag="B565_2281" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 2576196..2576660 /locus_tag="B565_2281" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(2576307..2576309,2576433..2576435) /locus_tag="B565_2281" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(2576322..2576324,2576331..2576336,2576346..2576348, 2576358..2576360,2576421..2576423,2576427..2576438) /locus_tag="B565_2281" /note="active site" /db_xref="CDD:143635" misc_feature order(2576409..2576411,2576493..2576495) /locus_tag="B565_2281" /note="I-site; other site" /db_xref="CDD:143635" gene complement(2576790..2577260) /locus_tag="B565_2282" /db_xref="GeneID:10488199" CDS complement(2576790..2577260) /locus_tag="B565_2282" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein" /protein_id="YP_004392934.1" /db_xref="GI:330829982" /db_xref="GeneID:10488199" /translation="MKAIILIVSSLLCFVTAPAGAEVYQRNTARPVNQVVFGQVETVR NITQRQILESEHSGWKTLGGAVLGGLLGNQFGGGHGREIATAVGALAGAAAAQQYQSG GTVVENKLVELLIRNEQNALINVIQDYDPAMVFANGDKVRILYFDDGVRVDKTY" gene 2577280..2577987 /locus_tag="B565_2283" /db_xref="GeneID:10488200" CDS 2577280..2577987 /locus_tag="B565_2283" /codon_start=1 /transl_table=11 /product="Leucyl/phenylalanyl-tRNA--protein transferase" /protein_id="YP_004392935.1" /db_xref="GI:330829983" /db_xref="GeneID:10488200" /translation="MSRYLTQLDDELCWFPDPSHALEEPNGLLAIGGDLSPARLLAAY HKGIFPWNEPHQPTLWWSPDPRGVIRPDQLHVGRTLQKIIRRTPFDISVNRAFNEVIT ACAAPRRTADGTWISQPMIETYQQLHRLGHAHSIEIWQEGELQAGLYGLSIGRLFCGE SMFSRIDNGAKLAMVALCRHFARHHGALIDCQMQNPFLATLGIEEWPRARFLAELARL GHQPLLASCWQEGEISL" misc_feature 2577289..2577966 /locus_tag="B565_2283" /note="Leucyl/phenylalanyl-tRNA protein transferase; Region: Leu_Phe_trans; cl01006" /db_xref="CDD:186298" gene 2577984..2578700 /locus_tag="B565_2284" /db_xref="GeneID:10488201" CDS 2577984..2578700 /locus_tag="B565_2284" /codon_start=1 /transl_table=11 /product="putative arginyl-tRNA--protein transferase" /protein_id="YP_004392936.1" /db_xref="GI:330829984" /db_xref="GeneID:10488201" /translation="MTEEVILKVGLTPKHPCSYLDHEQEQLLVLMDHNLLNANGYERL LTAGFRRSGNDIYRPHCPACHACQSLRIHSEHFRPSRGQKRIRQLNRDIEIVLSYDDK PEYYLLYERYIRERHHDGSMYPPNRSQYRGFLHCDWMPPLYLEMRKEGRLIGVATTDL LPHSLSAMYTFFDPDYADRSLGTFAILCQLDLARRTGRSWLYLGYLVEACRKMNYKRN YLPHELLIQGEWKNIDTKPE" misc_feature 2577984..2578694 /locus_tag="B565_2284" /note="arginyl-tRNA-protein transferase; Provisional; Region: PRK01305" /db_xref="CDD:179277" misc_feature 2578005..2578262 /locus_tag="B565_2284" /note="Arginine-tRNA-protein transferase, N terminus; Region: ATE_N; pfam04376" /db_xref="CDD:190958" misc_feature 2578332..2578673 /locus_tag="B565_2284" /note="Arginine-tRNA-protein transferase, C terminus; Region: ATE_C; pfam04377" /db_xref="CDD:190959" gene 2578769..2578987 /locus_tag="B565_2285" /db_xref="GeneID:10488202" CDS 2578769..2578987 /locus_tag="B565_2285" /codon_start=1 /transl_table=11 /product="protein translation initiation factor 1" /protein_id="YP_004392937.1" /db_xref="GI:330829985" /db_xref="GeneID:10488202" /translation="MAKEDSIEMQGTILETLPNTMFRVELENGHVVIAHISGKMRKNY IRILTGDKVTVALTPYDLSKGRIVFRSR" misc_feature 2578787..2578978 /locus_tag="B565_2285" /note="S1_IF1: Translation Initiation Factor IF1, S1-like RNA-binding domain. IF1 contains an S1-like RNA-binding domain, which is found in a wide variety of RNA-associated proteins. Translation initiation includes a number of interrelated steps preceding the...; Region: S1_IF1; cd04451" /db_xref="CDD:88417" misc_feature order(2578811..2578819,2578835..2578837,2578871..2578873, 2578880..2578885,2578898..2578909,2578958..2578960, 2578964..2578966) /locus_tag="B565_2285" /note="rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:88417" misc_feature order(2578871..2578873,2578883..2578885,2578976..2578978) /locus_tag="B565_2285" /note="predicted 30S ribosome binding site; other site" /db_xref="CDD:88417" gene complement(2579056..2581311) /locus_tag="B565_2286" /db_xref="GeneID:10488203" CDS complement(2579056..2581311) /locus_tag="B565_2286" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease, ATP-binding subunit ClpA" /protein_id="YP_004392938.1" /db_xref="GI:330829986" /db_xref="GeneID:10488203" /translation="MLNKDLEKTLNEAFKLARDERHEFMTVEHLLLALLDNSSAHEAL SSCGADVEQMRKEIRAFITQTTPLIPRDDEDRETQPTLGFQRVLQRAVFHVQSSGNTE VSGANVLVAIFSEQESQAAYFLKKAEISRLDVVNFLSHGVRKDSKPDLGSNNNPESDD DVSTAQIESFATNLNQLVLEGRIDPLIGRDQELNRTIQVLCRRRKNNPLLVGEAGVGK TAIAEGLAYRIVKGDVPEVIAGSTIYSLDMGSLLAGTKYRGDFEKRLKVLLKQIERQE GAILFIDEIHTIIGAGAASGGQLDAANLIKPLLSNGLLRCVGSTTYQEYAQIFEKDRA LARRFQKIDIVEPTIDDTTRILMGLKSRYEAHHGVRYTAKAIRAAAELSAKYINDRHL PDKAIDVIDEAGAGQRLLPASKRKKVINVQEIESIVAKIARIPEKSVSSSDKEVLKNL ERNLKMVVFGQDKAIEVLTDAIRLSRSGLGNERRPVGCFLFAGPTGVGKTEVTQQLGK ALGVEMLRFDMSEYMERHTVSRLIGAPPGYVGFEQGGLLTDAVIKHPHSVVLLDEIEK AHPDVFNLLLQVMDNGTLTDNNGRKADFRNVILVMTTNAGVQETQRKSIGFQQQDLSH DAMAVINKTFSPEFRNRLDHTIWFNHLDMTVIHQVVDKFIVELQVQLDAKGVSLEVSE RARHWLAEKGYDRAMGARPMGRVIQEHLKKPLANEILFGSLVDGGIVKVELVNDSLSF DFQVNVEAVSH" misc_feature complement(2579071..2581311) /locus_tag="B565_2286" /note="ATP-dependent Clp protease ATP-binding subunit; Provisional; Region: clpA; PRK11034" /db_xref="CDD:182917" misc_feature complement(2581126..2581275) /locus_tag="B565_2286" /note="Clp amino terminal domain; Region: Clp_N; pfam02861" /db_xref="CDD:190453" misc_feature complement(2580271..2580753) /locus_tag="B565_2286" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(2580655..2580678) /locus_tag="B565_2286" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(2580349..2580351,2580463..2580465, 2580652..2580675)) /locus_tag="B565_2286" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(2580460..2580477) /locus_tag="B565_2286" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(2580298..2580300) /locus_tag="B565_2286" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature complement(2579500..2579937) /locus_tag="B565_2286" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(2579812..2579835) /locus_tag="B565_2286" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(2579500..2579502,2579626..2579628, 2579809..2579832)) /locus_tag="B565_2286" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(2579623..2579640) /locus_tag="B565_2286" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(2579092..2579361) /locus_tag="B565_2286" /note="C-terminal, D2-small domain, of ClpB protein; Region: ClpB_D2-small; pfam10431" /db_xref="CDD:192583" gene complement(2581371..2581688) /locus_tag="B565_2287" /db_xref="GeneID:10488204" CDS complement(2581371..2581688) /locus_tag="B565_2287" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease adapter protein clpS" /protein_id="YP_004392939.1" /db_xref="GI:330829987" /db_xref="GeneID:10488204" /translation="MSKQKELFANEEIAEAEKTKLQPPPMYKVVLNNDDYTPMEFVVE VLQKFFGMDLDKATQVMLSVHYSGKGVCGMFTAEIAETKVVQVNTYARNNEHPLLCTM EKA" misc_feature complement(2581374..2581658) /locus_tag="B565_2287" /note="ATP-dependent Clp protease adaptor protein ClpS; Region: ClpS; cl00933" /db_xref="CDD:186267" gene 2581918..2582136 /locus_tag="B565_2288" /db_xref="GeneID:10488205" CDS 2581918..2582136 /locus_tag="B565_2288" /codon_start=1 /transl_table=11 /product="Cold shock-like protein cspD" /protein_id="YP_004392940.1" /db_xref="GI:330829988" /db_xref="GeneID:10488205" /translation="MATGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMEGYKTLKA GQAVNFELQQGPKGNHASVIVPNEAQNM" misc_feature 2581924..2582115 /locus_tag="B565_2288" /note="Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein...; Region: CSP_CDS; cd04458" /db_xref="CDD:88424" misc_feature order(2581939..2581941,2581966..2581968,2581999..2582001, 2582086..2582088) /locus_tag="B565_2288" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:88424" misc_feature order(2581957..2581977,2581996..2582007) /locus_tag="B565_2288" /note="RNA-binding motif; other site" /db_xref="CDD:88424" gene complement(2582253..2583107) /locus_tag="B565_2289" /db_xref="GeneID:10488206" CDS complement(2582253..2583107) /locus_tag="B565_2289" /codon_start=1 /transl_table=11 /product="methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase" /protein_id="YP_004392941.1" /db_xref="GI:330829989" /db_xref="GeneID:10488206" /translation="MSAKIIDGKQVAQTIRSQVAAQVQQRLAAGKRAPGLAVILVGAD PASQVYVGSKRRACEEVGFLSRSYDLSATASQEELLALIDQLNADNHVDGILVQLPLP DHFDTTQVLERIQPDKDVDGFHPYNVGRLAQRIPALRPCTPKGIMTLIETTGVKTHGL HAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTRDLEDQVRRADLLVVAVGKPNFIPG EWIKPGALVIDVGINRLADGSLVGDVEFETARSHASFITPVPGGVGPMTVASLMENTL IACSEYHD" misc_feature complement(2582256..2583107) /locus_tag="B565_2289" /note="bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional; Region: PRK10792" /db_xref="CDD:182735" misc_feature complement(2582745..2583098) /locus_tag="B565_2289" /note="Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Region: THF_DHG_CYH; pfam00763" /db_xref="CDD:189708" misc_feature complement(2582274..2582762) /locus_tag="B565_2289" /note="NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase; Region: NAD_bind_m-THF_DH_Cyclohyd; cd01080" /db_xref="CDD:133448" misc_feature complement(order(2582502..2582504,2582529..2582534, 2582538..2582540,2582544..2582561,2582568..2582570, 2582577..2582582,2582607..2582609,2582625..2582627, 2582631..2582633,2582721..2582723,2582730..2582735)) /locus_tag="B565_2289" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:133448" misc_feature complement(order(2582307..2582309,2582316..2582318, 2582412..2582414,2582418..2582420,2582463..2582465, 2582472..2582474,2582478..2582480,2582535..2582540, 2582604..2582609,2582682..2582684)) /locus_tag="B565_2289" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:133448" misc_feature complement(order(2582304..2582306,2582325..2582330)) /locus_tag="B565_2289" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133448" gene 2583321..2583397 /locus_tag="B565_t055" /db_xref="GeneID:10488207" tRNA 2583321..2583397 /locus_tag="B565_t055" /product="tRNA-Pro" /db_xref="GeneID:10488207" gene 2583435..2583511 /locus_tag="B565_t056" /db_xref="GeneID:10490040" tRNA 2583435..2583511 /locus_tag="B565_t056" /product="tRNA-Arg" /db_xref="GeneID:10490040" gene 2583564..2583639 /locus_tag="B565_t057" /db_xref="GeneID:10490041" tRNA 2583564..2583639 /locus_tag="B565_t057" /product="tRNA-His" /db_xref="GeneID:10490041" gene 2583959..2584669 /locus_tag="B565_2290" /db_xref="GeneID:10490042" CDS 2583959..2584669 /locus_tag="B565_2290" /codon_start=1 /transl_table=11 /product="response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /protein_id="YP_004392942.1" /db_xref="GI:330829990" /db_xref="GeneID:10490042" /translation="MQRILFVEDDPEIGQLISSWLGRHDMEVILEPRGDMALARIEAE QPDLVLLDIMLPGQDGMSLCRDLRPRFDGPIVMLTSLDSDMNQILSLELGANDYILKT TPPPVLLARLRVQFRQQPQASTQPVATSSVPQQLQFGRLRVDGPGRDVRLDGESIALS TADFDLLWELACHAGQILSREALFRSLRGREYDGQDRSMDVAISRLRRKLGDNPDNPT RIKTVRQKGYLFVPHAWE" misc_feature 2583959..2584666 /locus_tag="B565_2290" /note="DNA-binding transcriptional regulator RstA; Provisional; Region: PRK10701" /db_xref="CDD:182660" misc_feature 2583971..2584297 /locus_tag="B565_2290" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(2583980..2583985,2584112..2584114,2584136..2584138, 2584193..2584195,2584250..2584252,2584259..2584264) /locus_tag="B565_2290" /note="active site" /db_xref="CDD:29071" misc_feature 2584112..2584114 /locus_tag="B565_2290" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(2584121..2584126,2584130..2584138) /locus_tag="B565_2290" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 2584259..2584267 /locus_tag="B565_2290" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 2584364..2584648 /locus_tag="B565_2290" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cd00383" /db_xref="CDD:29475" misc_feature order(2584436..2584438,2584493..2584498,2584550..2584552, 2584559..2584561,2584583..2584588,2584622..2584624, 2584637..2584639) /locus_tag="B565_2290" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29475" gene 2584691..2586016 /locus_tag="B565_2291" /db_xref="GeneID:10488208" CDS 2584691..2586016 /locus_tag="B565_2291" /codon_start=1 /transl_table=11 /product="two-component system sensor histidine kinase RstB" /protein_id="YP_004392943.1" /db_xref="GI:330829991" /db_xref="GeneID:10488208" /translation="MRRLFIQFYLLLIGCFTLAILLVGVVYQVTAERAGDRYLERMMQ GSLGLLTGELARTPPERWPDRLAEQSSQFTLPLKIGELVRQPLASEDQAFLAAGNIVI VEEDDTFLQRIPDTDRVLIVGPVPYLSYLHELHWVDVGLLLVIGLSLGLPILLWLRPH WRGLQQLEQTARRVGDGDLSCRTNLPPGSSLARVGRTFDQMATQLQAMIASRKQLTDA IAHELRTPLVRLRYRLAMLDPAPAEQEQQALERDLGALDALIEEMLTYAKLDRPELPL QRDELELSHWAQVHLGDWQALAPEKKLTLDLPPRHMPWCGDQRLLTRAVENLIGNALR YAESEVTLSISRLQENYLLEVSDDGPGIDPALAPQIFEPFVRLDQSRDRRTGGTGLGL AIVRSIARHHGGDVALLASDHGARFCLTLPVHLDTNRHQPLTEGPPQPS" misc_feature 2584691..2585989 /locus_tag="B565_2291" /note="sensor protein RstB; Provisional; Region: PRK10604" /db_xref="CDD:182583" misc_feature 2585162..2585320 /locus_tag="B565_2291" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 2585321..2585500 /locus_tag="B565_2291" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cl00080" /db_xref="CDD:153499" misc_feature 2585651..2585953 /locus_tag="B565_2291" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(2585669..2585671,2585681..2585683,2585690..2585692, 2585753..2585755,2585759..2585761,2585765..2585767, 2585771..2585776,2585855..2585866,2585912..2585914, 2585930..2585935,2585939..2585941) /locus_tag="B565_2291" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 2585681..2585683 /locus_tag="B565_2291" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(2585765..2585767,2585771..2585773,2585855..2585857, 2585861..2585863) /locus_tag="B565_2291" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene 2586071..2586253 /locus_tag="B565_2292" /db_xref="GeneID:10488209" CDS 2586071..2586253 /locus_tag="B565_2292" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392944.1" /db_xref="GI:330829992" /db_xref="GeneID:10488209" /translation="MKKIIPLTLAAVFALTSGFTMAATPTKTATPQATQTKVVKKHHK ATHAKTPAVKVAPKTK" gene 2586406..2588955 /locus_tag="B565_2293" /db_xref="GeneID:10488210" CDS 2586406..2588955 /locus_tag="B565_2293" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392945.1" /db_xref="GI:330829993" /db_xref="GeneID:10488210" /translation="MWRHLLKWLGPLCSLLLLGTALTVLYHLTQAWHWHDIRVAIWSQ PLLRLAGALLLTLLSYGCLCSYDMLALHALGKRLPWQQVSITSFIAYTFSNTLGFSLL TGTSVRYRLYSALGLATGEVARVVLFCSITFFLGLLAWGGGALLTCDVSQLLPDWPQW ADTLLRLAGGMALLLVASYLCWPTHRLSWRKHTLTLPGFRIRLLQLLVALADWMAAAA VLFVLLPADSVPYPVLLSAFVLASFLGVLAHVPGGIGVFEASMSLLLANYLPADKLLA SLLLYRCIYYLLPFLCALLLFASQEMLQQKARWQRLQGLMSAVHEFLPALISMGTFAA GSLLLCSGMIPTMRSHIEVWLQVLPLHLLELSHVLGSVSGILLILLARSLYRRHDAAF RITQLLLALGIAFSLLKGGDWESALLLGSFLFIMTPCRSLFYRKGSLLYPQYTPGWLI SVGAVLLGALWLLLFSYRQVEYDHALWFHFSPHGGAARGLRAMGSVVAVLAVAGVAQL LAPLRVVGEKPDKKTLARAHELVVREGGIHGYLAQLQDKSLLFHPAGDAFLMYGIEGS SWIVMGDPIGRPEQIEELLWQFRERCDEHDANPVFYQVSARYLPLYLELGLIPFKLGE EAMVDLATFDLAGSRLRNLRQSHAKGKREGLTFEVVEASAVAPLLPRLQTVSDTWLQS KMGKEKGFSIGHFEPDYMTLSPAALVWHEGQIVGFANLWVSDNKETLSIDLMRYSLDT GTAPIMDFLFVELLLWGKAQGYASFNLGMAPMSGFNDHPLNSYWARLGNTLFVRGSRF YNFQGLRRYKEKFSPRWEPRYLLCSSKLVLPRTLTHLITLISRGPLGLIKK" misc_feature <2586604..2587206 /locus_tag="B565_2293" /note="Predicted integral membrane protein [Function unknown]; Region: COG0392" /db_xref="CDD:30741" misc_feature <2587090..2587203 /locus_tag="B565_2293" /note="Uncharacterised protein family (UPF0104); Region: UPF0104; cl04219" /db_xref="CDD:194802" misc_feature 2587369..2588952 /locus_tag="B565_2293" /note="Uncharacterized conserved protein [Function unknown]; Region: COG2898" /db_xref="CDD:32723" misc_feature 2588020..2588871 /locus_tag="B565_2293" /note="Uncharacterized conserved protein (DUF2156); Region: DUF2156; cl12090" /db_xref="CDD:196332" gene 2588967..2589689 /locus_tag="B565_2294" /db_xref="GeneID:10488211" CDS 2588967..2589689 /locus_tag="B565_2294" /codon_start=1 /transl_table=11 /product="Virulence protein" /protein_id="YP_004392946.1" /db_xref="GI:330829994" /db_xref="GeneID:10488211" /translation="MRALILLLLSLVLPVSSFAAHAAPVKDDLSLIELPVKQPSDAPM VIFLSGDGGWAALDKGLSAQFQLHGMPVVGWSSLTYYWKKKTPEQVTADLERILDDYQ ARWQRPHWLLVGFSFGAEIAPFVINRLPEHYRQGLVGAVMLSPSTSSDFEIHVSDMLT HKARSYPTEPQVKTIRDLPMLCLQGADDDDGDRLCPRLNQPNVTSITLPGGHHFDDNY PQLYQAITKHLNPPPDPLTVEH" misc_feature 2589096..2589641 /locus_tag="B565_2294" /note="Bacterial virulence protein (VirJ); Region: VirJ; pfam06057" /db_xref="CDD:114761" misc_feature 2589099..2589608 /locus_tag="B565_2294" /note="Alpha/beta hydrolase family; Region: Abhydrolase_5; pfam12695" /db_xref="CDD:193171" gene complement(2589982..2590069) /locus_tag="B565_t058" /db_xref="GeneID:10488212" tRNA complement(2589982..2590069) /locus_tag="B565_t058" /product="tRNA-Ser" /db_xref="GeneID:10488212" gene complement(2590204..2590656) /locus_tag="B565_2295" /db_xref="GeneID:10490043" CDS complement(2590204..2590656) /locus_tag="B565_2295" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392947.1" /db_xref="GI:330829995" /db_xref="GeneID:10490043" /translation="MNIPSSEMIMRWLQQARIEHYVCDQCHGIHIVSLQSVDGIQESR IFVEEEGLLFSSELEVRPSAMLPLVAELGRLNMQYPSLKVFLDIIDDNLPRLVVGHTV FTKAGLSVEQFLLFVQSTIAATHELVAECERSGFLNLPEIQVAPESVH" misc_feature complement(2590210..2590656) /locus_tag="B565_2295" /note="Putative bacterial sensory transduction regulator; Region: YbjN; pfam10722" /db_xref="CDD:119242" gene 2590818..2592155 /locus_tag="B565_2296" /db_xref="GeneID:10488213" CDS 2590818..2592155 /locus_tag="B565_2296" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392948.1" /db_xref="GI:330829996" /db_xref="GeneID:10488213" /translation="MTIQEKYRLHLKSLSDELLTLQKPIRILDAIKWPRHLQDRFLTS GGRELPAIDRHFYDALPLGFDPRNKYLELKELRDRIRRKLGPQDDLGRILQETVDQYM VVIEMLRQRGQPDFQRYSQLLYGSASDHLRGDRKTLKELGARLCDIFSLPGARHLVRP YPKEFEGEAAVAKLQGKLSSYFSDGTVQVKLSDGIVSDAAAGGDYIKLNSHARFSELD LQVLEVHEGWVHVGTTLNGRQQPYATWLSAGSPRITACQEGLAVLIETLTFSSFPDRA KRISDRVMAIDMAERGADFIEVFQHFVQQGTSEHDAYKITQRVFRGGMVGGGACFTKD LSYVRGYVETVNFIRSAVLEGVPEILPMLFVGKVTLDDIPVLYQHYLEGLIAAPRYLP PMFRDLTGLYVWFGFASGMSLVDIGRVQHHFRQLFQRLPVADPIIAPVDIEID" misc_feature 2590878..2592041 /locus_tag="B565_2296" /note="conserved hypothetical protein; Region: QEGLA; TIGR02421" /db_xref="CDD:162850" misc_feature 2590929..2592062 /locus_tag="B565_2296" /note="Domain of unknown function (DUF1704); Region: DUF1704; cl06858" /db_xref="CDD:164092" gene complement(2592236..2592817) /locus_tag="B565_2297" /db_xref="GeneID:10488214" CDS complement(2592236..2592817) /locus_tag="B565_2297" /codon_start=1 /transl_table=11 /product="Thymidine kinase" /protein_id="YP_004392949.1" /db_xref="GI:330829997" /db_xref="GeneID:10488214" /translation="MASLHYKFATMNSGKSTQLIQAHFNYLERGMHPLAMTPAIDDRF GVGVISARVGLELKVDVFSDSCDLFEMVKARHAKKHIDVFIVDEAQFLTREQVYQLAR IVDEQDIPVMAYGLKTDFRGELFPGSYHLLCLADKFEELKSICWCGNKAHMNSRVNEA GQVMRDGEQVEIGGNDRYVSLCRKHYLEGRAYK" misc_feature complement(2592248..2592817) /locus_tag="B565_2297" /note="Thymidine kinase; Region: TK; cl00631" /db_xref="CDD:186114" gene complement(2592909..2594489) /locus_tag="B565_2298" /db_xref="GeneID:10488215" CDS complement(2592909..2594489) /locus_tag="B565_2298" /codon_start=1 /transl_table=11 /product="Na+/H+ antiporter" /protein_id="YP_004392950.1" /db_xref="GI:330829998" /db_xref="GeneID:10488215" /translation="MDISHFADSGWSVLPPLLAVALAIMTRRVLLSLGVGIVTGSLLL NQFSPLESLHYMLNTVLKIFWVDGALNRDNVNMILFMLLLGGLISLMSVSGATRAFAE WAERRAKTRKGAKALTGMMVFAFFIDDFFHSLSVGAICRPVTDRFQISRAKLAYLLDS TAAPVCVLMPISSWGAYIIALVGGIMAAHGLTEQSPIAAFVEMIPMNLYAVFTLIMVL VVIACQLDIGPMRQHEAWALEGKLWDESKGRPIGLDMESPEESNGGMIDMVLPILTLT AATIYFMIDSGAAVLSEKGLPFSVLGSFENTNVGSSLVYGALCSLVVSIGLAMRLKLG AKNWIKAAPQGVMAMLPAINILLFAWTIGAVVRDVETGKYLASLANGNLPIEVLPAVV FILSCAMAFATGTSWGTFGIMLPLAGDMAAASDISLMLPMLAAVLAGSVFGDHSSPIS STSILSATGAGCHHIDHVMTQLPYALAIAFGAAIGYLAMGLMHSSLAGFSVSALWFVL FTGYHLKKAKARPVLATA" misc_feature complement(2592966..2594474) /locus_tag="B565_2298" /note="Na+/H+ antiporter [Energy production and conversion]; Region: NhaC; COG1757" /db_xref="CDD:31943" misc_feature complement(2593017..2593997) /locus_tag="B565_2298" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene 2595052..2595456 /locus_tag="B565_2299" /db_xref="GeneID:10488216" CDS 2595052..2595456 /locus_tag="B565_2299" /codon_start=1 /transl_table=11 /product="histone-like nucleoid structuring protein" /protein_id="YP_004392951.1" /db_xref="GI:330829999" /db_xref="GeneID:10488216" /translation="MNEFLKVLLNIRSLRATCRELSLEQLEEALEKLSAIVAERQQDE AAEHQAREEHLRKINEYSEMLKAAGIDPAELVSAVATNPGKSEKAKRAPRPAKYRYQD NGVEKTWTGQGRMPSAIASAVAAGKSLEDFAI" misc_feature 2595052..2595453 /locus_tag="B565_2299" /note="Domain in histone-like proteins of HNS family; Region: HNS; cl09251" /db_xref="CDD:186852" misc_feature 2595052..2595453 /locus_tag="B565_2299" /note="DNA binding protein, nucleoid-associated; Provisional; Region: PRK10328" /db_xref="CDD:182380" gene complement(2595526..2596068) /locus_tag="B565_2300" /db_xref="GeneID:10488217" CDS complement(2595526..2596068) /locus_tag="B565_2300" /codon_start=1 /transl_table=11 /product="alamin adenosyltransferase" /protein_id="YP_004392952.1" /db_xref="GI:330830000" /db_xref="GeneID:10488217" /translation="MTRLADGIQLPKDHLRVETYGYIDELNSHIGLLICDVPSQEIGL LADLQLLQQELFDLGGELAFSSDAQNESIWQVNAAWTTRLEQQIDRYSEPLPPLRQFI LPGGSRAAAQAHVVRTLVRHCERLLLTLSREERVNPEVLPYLNRMSDWFFTVARYLIC VAGDREVLWVKAADRPQSAI" misc_feature complement(2595595..2596068) /locus_tag="B565_2300" /note="Cobalamin adenosyltransferase; Region: Cob_adeno_trans; cl00920" /db_xref="CDD:193973" gene complement(2596098..2596328) /locus_tag="B565_2301" /db_xref="GeneID:10488218" CDS complement(2596098..2596328) /locus_tag="B565_2301" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392953.1" /db_xref="GI:330830001" /db_xref="GeneID:10488218" /translation="MDWLSDEQVLLTLTNKMPYGKYQGRRIIDIPEPYLVWMARSGFP AGKLGQTLALAYEIKLNGLESMIIPIINRMSV" misc_feature complement(2596119..2596313) /locus_tag="B565_2301" /note="Protein of unknown function (DUF3820); Region: DUF3820; cl01411" /db_xref="CDD:194129" gene complement(2596330..2597022) /locus_tag="B565_2302" /db_xref="GeneID:10488219" CDS complement(2596330..2597022) /locus_tag="B565_2302" /codon_start=1 /transl_table=11 /product="Radical activating enzyme" /protein_id="YP_004392954.1" /db_xref="GI:330830002" /db_xref="GeneID:10488219" /translation="MQQAVIEMHYPINEIFQTIQGEGIFTGLPAIFVRLQGCPVGCPW CDTRHTWVVDPAREVGKAAVLDRSNESDCWSQLSTAQIIKSFGELGYQARHVVITGGE PCLYDLHELSSALLAAGYQVQIETSGTSEIKTHEQTWVTVSPKIGMKGGLPVLVSALE RANEIKHPVATEHHIEELDTLLATATLRPDVVIALQPISQKPRATQLAMDTCIARNWR LSIQTHKYLDID" misc_feature complement(2596333..2597004) /locus_tag="B565_2302" /note="Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones]; Region: NrdG; COG0602" /db_xref="CDD:30947" misc_feature complement(<2596621..2596995) /locus_tag="B565_2302" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene complement(2597063..2597770) /locus_tag="B565_2303" /db_xref="GeneID:10488220" CDS complement(2597063..2597770) /locus_tag="B565_2303" /codon_start=1 /transl_table=11 /product="putative (Aluminum) resistance protein with adenine nucleotide alpha hydrolase domain" /protein_id="YP_004392955.1" /db_xref="GI:330830003" /db_xref="GeneID:10488220" /translation="MKKAVVVFSGGQDSTTCLVQALARYDEVHAITFDYGQRHREEID TARRLGSALGIAAHKVMDVTLLNELAVSALTRDDIPVSCELQDNGLPNTFVPGRNILF LTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAVSLGLDRGIRFETPLM WLDKAETWALADHYGHLDTVRQQTLTCYNGIAGDGCGTCPACELRRRGLNNYLADKAG IMARLFEKTGLGEKSAE" misc_feature complement(2597141..2597764) /locus_tag="B565_2303" /note="ExsB is a transcription regulator related protein. It is a subfamily of a Adenosine nucleotide binding superfamily of proteins. This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome. In...; Region: ExsB; cd01995" /db_xref="CDD:73293" misc_feature complement(order(2597657..2597659,2597663..2597665, 2597729..2597740,2597744..2597752)) /locus_tag="B565_2303" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:73293" gene complement(2597791..2598492) /locus_tag="B565_2304" /db_xref="GeneID:10488221" CDS complement(2597791..2598492) /locus_tag="B565_2304" /codon_start=1 /transl_table=11 /product="DTW domain-containing protein" /protein_id="YP_004392956.1" /db_xref="GI:330830004" /db_xref="GeneID:10488221" /translation="MGTVKKSSKLVRESVITQSNPDLSDNMKQSNDKNSRYCTRCTRA LKACLCDYIVPVDNHTPLYILQHPNEVAHPKGTAALLAASLQQCEIHVGEDFSRDEWL NGLLADPSRRCYLLWPDEDAISLTDLRQQRESESSGKTSIAFILLDGTWRKAYRMLQS NPALARLPRIGIGAIAGQYAIRKKPFPDALSTIEAGYHLLSRWEGRPEHYAPLLTLFN RLNTQWQDFAEGRRA" misc_feature complement(2597818..2598390) /locus_tag="B565_2304" /note="DTW domain; Region: DTW; cl01221" /db_xref="CDD:154271" gene 2598518..2599006 /locus_tag="B565_2305" /db_xref="GeneID:10488222" CDS 2598518..2599006 /locus_tag="B565_2305" /codon_start=1 /transl_table=11 /product="integral membrane protein" /protein_id="YP_004392957.1" /db_xref="GI:330830005" /db_xref="GeneID:10488222" /translation="MIAGGEGWRIITGNLAHTNLWHLLLNLGGLVILYSLFRDYLGGA RLPLLMLLLWLAVGLGIWWWCPQTQWYMGLSGSLHGLFVWGAMQDIRHGRRTSGWLLL AGMGLKLAMDFYNAGESPISTLINAKVHIGSHLIGAGAGLLLGLHRVSLSEPVTHQPA RH" misc_feature 2598521..2598904 /locus_tag="B565_2305" /note="Rhomboid family; Region: Rhomboid; cl11446" /db_xref="CDD:196238" gene complement(2598981..2599682) /locus_tag="B565_2306" /db_xref="GeneID:10488223" CDS complement(2598981..2599682) /locus_tag="B565_2306" /codon_start=1 /transl_table=11 /product="Orotidine 5'-phosphate decarboxylase" /protein_id="YP_004392958.1" /db_xref="GI:330830006" /db_xref="GeneID:10488223" /translation="MQDPKVLVALDYQHEADALAFVERISPAQCRLKVGKEMFTLFGP QFVRQLVAKGFDVFLDLKFHDIPNTVAKAVAASAELGVWMVNVHASGGERMMRAAKEA LLPYGDKAPLLIGVTVLTSMEQSDMIPLGLDVSPAEQVIRLATLTKASGLDGVVCSAN EAHELKALLGDEFKLVTPGIRPTGSAAGDQRRVMTPKAAVEAGSDYLVIGRPITQAAD PAAMLASINAELAGA" misc_feature complement(2599005..2599667) /locus_tag="B565_2306" /note="Orotidine 5'-phosphate decarboxylase (ODCase) is a dimeric enzyme that decarboxylates orotidine 5'-monophosphate (OMP) to form uridine 5'-phosphate (UMP), an essential step in the pyrimidine biosynthetic pathway. In mammals, UMP synthase contains two...; Region: OMP_decarboxylase_like; cd04725" /db_xref="CDD:73387" misc_feature complement(order(2599050..2599055,2599149..2599151, 2599323..2599328,2599497..2599499,2599503..2599505, 2599578..2599580,2599584..2599586,2599650..2599652, 2599656..2599658)) /locus_tag="B565_2306" /note="active site" /db_xref="CDD:73387" misc_feature complement(order(2599050..2599052,2599266..2599268, 2599326..2599328,2599380..2599382,2599413..2599421, 2599464..2599469,2599476..2599481,2599488..2599493, 2599497..2599502,2599569..2599574,2599578..2599580)) /locus_tag="B565_2306" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73387" gene complement(2599701..2600867) /locus_tag="B565_2307" /db_xref="GeneID:10488224" CDS complement(2599701..2600867) /locus_tag="B565_2307" /codon_start=1 /transl_table=11 /product="tetratricopeptide repeat family protein" /protein_id="YP_004392959.1" /db_xref="GI:330830007" /db_xref="GeneID:10488224" /translation="MLELLFLLLPIAAGYGWYMGRRSVRQDTQKQSNQFSRQYVAGLN YLLSDESDKAVDLFIQLLEVDSETIETHLSLGNLFRQRGEVDRAIKIHQNLVTRQLTR EQRQLALQELARDFLAAGLLDRAEALWNELCDDSDFEETALAQLLIIHQQLRDWDKAI DVAVRLQKFQGKKLADPISHFYCEQAEIALREGNKGEGLAKLKRALSINPACARASLR LAELAMAEGEYEQASKELLRVFEQDIDFASEAMPKLLECYQQLGRTPALIPLLEKAVE DHAGVSVTLALAKLVEERDGLSQARSLVLRQLRRHPSMKGFYQLVGFQLASAEEGPAK ESLELLQQLVGEQIKIKSTHKCRQCGFATHSLFWQCPSCRQWGSIKPIRGLDGE" misc_feature complement(2599704..2600867) /locus_tag="B565_2307" /note="tetratricopeptide repeat protein; Provisional; Region: PRK11788" /db_xref="CDD:183314" misc_feature complement(2600040..2600324) /locus_tag="B565_2307" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(2600085..2600090,2600097..2600102, 2600109..2600114,2600193..2600198,2600205..2600210, 2600214..2600219,2600304..2600309,2600316..2600321)) /locus_tag="B565_2307" /note="binding surface" /db_xref="CDD:29151" misc_feature complement(order(2600046..2600048,2600055..2600057, 2600067..2600069,2600103..2600105,2600151..2600153, 2600160..2600162,2600172..2600174,2600208..2600210, 2600253..2600255,2600262..2600264,2600274..2600276, 2600310..2600312)) /locus_tag="B565_2307" /note="TPR motif; other site" /db_xref="CDD:29151" gene complement(2600877..2601161) /locus_tag="B565_2308" /db_xref="GeneID:10488225" CDS complement(2600877..2601161) /locus_tag="B565_2308" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392960.1" /db_xref="GI:330830008" /db_xref="GeneID:10488225" /translation="MKRILALIPLVLVFVLTLALGSQNGQLVQFNYLIAQGEFSLAML LGFFFAGGFLLGWLVFGLLFLRLKMQNRTLNRTMRRQSRELELARSPGKE" misc_feature complement(2600904..2601161) /locus_tag="B565_2308" /note="Protein of unknown function (DUF1049); Region: DUF1049; cl01539" /db_xref="CDD:194160" gene complement(2601320..2601604) /locus_tag="B565_2309" /db_xref="GeneID:10488226" CDS complement(2601320..2601604) /locus_tag="B565_2309" /codon_start=1 /transl_table=11 /product="integration host factor subunit beta" /protein_id="YP_004392961.1" /db_xref="GI:330830009" /db_xref="GeneID:10488226" /translation="MTKSDLIEQLAASRMHMPAKDVEAAIKEILEQMASTLQNGDRIE IRGFGSFSLHYRAPRVGRNPKTGDKVELTGKYVPHFKPGKELRERVNIIE" misc_feature complement(2601338..2601601) /locus_tag="B565_2309" /note="Integration host factor (IHF) and HU are small heterodimeric members of the DNABII protein family that bind and bend DNA, functioning as architectural factors in many cellular processes including transcription, site-specific recombination, and higher-...; Region: HU_IHF; cd00591" /db_xref="CDD:29683" misc_feature complement(order(2601338..2601340,2601359..2601361, 2601365..2601367,2601377..2601382,2601446..2601448, 2601461..2601466,2601473..2601487,2601497..2601502, 2601509..2601514,2601521..2601523,2601563..2601565, 2601578..2601580,2601587..2601589,2601596..2601601)) /locus_tag="B565_2309" /note="IHF dimer interface [polypeptide binding]; other site" /db_xref="CDD:29683" misc_feature complement(order(2601353..2601355,2601362..2601364, 2601368..2601370,2601380..2601382,2601410..2601421, 2601428..2601430,2601434..2601439,2601443..2601445, 2601455..2601457,2601464..2601469,2601473..2601475, 2601479..2601481,2601524..2601526,2601593..2601601)) /locus_tag="B565_2309" /note="IHF - DNA interface [nucleotide binding]; other site" /db_xref="CDD:29683" gene complement(2601697..2603367) /locus_tag="B565_2310" /db_xref="GeneID:10488227" CDS complement(2601697..2603367) /locus_tag="B565_2310" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S1" /protein_id="YP_004392962.1" /db_xref="GI:330830010" /db_xref="GeneID:10488227" /translation="MIESFAQLFEESLNAVETRQGSIVKGTVVAIENGFVLVDAGLKS ESAIPAEEFKNAMGELEINVGDTVDVALDSIEDGFGETKLSREKAKRHEAWLQLEKAY EEQATVIGIINGKVKGGFTVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLD QKRNNVVVSRRAVIETENTSERESLLANLQEGQEVKGIVKNLTDYGAFVDLGGVDGLL HITDMAWKRVKHPSEIVNVGDEIAVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE TTRLSGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVDVMVLD IDEERRRISLGLKQCKSNPWQLFAETHAKGDRVSGKIKSITDFGIFIGLDGGIDGLVH LSDISWNNQGEEAVREFKKGDEIEAVVLQVDPERERISLGVKQIEEDPFNKYLADNKK GAIVKGKVTEVDAKGAIIELADGVEGYLRASDAARDRVEDATLVLSVGDEVEAKFMGV DRKNRTVSLSVRAKDEADERVAIDNLNQQEEVVFSNAMMEAFKAAKGE" misc_feature complement(2601700..2603367) /locus_tag="B565_2310" /note="30S ribosomal protein S1; Reviewed; Region: rpsA; PRK06299" /db_xref="CDD:180520" misc_feature complement(2603107..2603307) /locus_tag="B565_2310" /note="S1_RPS1_repeat_ec1_hs1: Ribosomal protein S1 (RPS1) domain. RPS1 is a component of the small ribosomal subunit thought to be involved in the recognition and binding of mRNA's during translation initiation. The bacterial RPS1 domain architecture...; Region: S1_RPS1_repeat_ec1_hs1; cd05687" /db_xref="CDD:88442" misc_feature complement(order(2603221..2603223,2603227..2603229, 2603257..2603259,2603281..2603283)) /locus_tag="B565_2310" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88442" misc_feature complement(2602855..>2603010) /locus_tag="B565_2310" /note="S1_RPS1_repeat_ec2_hs2: Ribosomal protein S1 (RPS1) domain. RPS1 is a component of the small ribosomal subunit thought to be involved in the recognition and binding of mRNA's during translation initiation. The bacterial RPS1 domain architecture...; Region: S1_RPS1_repeat_ec2_hs2; cd04465" /db_xref="CDD:88430" misc_feature complement(order(2602972..2602974,2602978..2602980, 2603005..2603007)) /locus_tag="B565_2310" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88430" misc_feature complement(2602594..2602797) /locus_tag="B565_2310" /note="S1_RPS1_repeat_ec3: Ribosomal protein S1 (RPS1) domain. RPS1 is a component of the small ribosomal subunit thought to be involved in the recognition and binding of mRNA's during translation initiation. The bacterial RPS1 domain architecture consists of...; Region: S1_RPS1_repeat_ec3; cd05688" /db_xref="CDD:88443" misc_feature complement(order(2602711..2602713,2602717..2602719, 2602744..2602746,2602768..2602770)) /locus_tag="B565_2310" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88443" misc_feature complement(2602333..2602548) /locus_tag="B565_2310" /note="S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain...; Region: S1_like; cl09927" /db_xref="CDD:195927" misc_feature complement(order(2602453..2602455,2602459..2602461, 2602489..2602491,2602513..2602515)) /locus_tag="B565_2310" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88416" misc_feature complement(2602072..2602278) /locus_tag="B565_2310" /note="S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain...; Region: S1_like; cl09927" /db_xref="CDD:195927" misc_feature complement(order(2602192..2602194,2602198..2602200, 2602228..2602230,2602252..2602254)) /locus_tag="B565_2310" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88416" misc_feature complement(2601799..2602017) /locus_tag="B565_2310" /note="S1_RPS1_repeat_ec6: Ribosomal protein S1 (RPS1) domain. RPS1 is a component of the small ribosomal subunit thought to be involved in the recognition and binding of mRNA's during translation initiation. The bacterial RPS1 domain architecture consists of...; Region: S1_RPS1_repeat_ec6; cd05691" /db_xref="CDD:88446" misc_feature complement(order(2601931..2601933,2601937..2601939, 2601967..2601969,2601991..2601993)) /locus_tag="B565_2310" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88446" gene complement(2603462..2604154) /locus_tag="B565_2311" /db_xref="GeneID:10488228" CDS complement(2603462..2604154) /locus_tag="B565_2311" /codon_start=1 /transl_table=11 /product="Cytidylate kinase" /protein_id="YP_004392963.1" /db_xref="GI:330830011" /db_xref="GeneID:10488228" /translation="MPQMAPVMTIDGPSGAGKGTLCQLLAEKLGWHLLDSGAIYRVLS LAALHHDVELDSEASLVPLAANLDVQFQVEGDLVRVILEGEDVSRTIRTEEVGNAASK IAAFPRVREALLRRQRAFRQAPGLIADGRDMGTVVFPEAEVKIFLDASAEERAQRRYK QLQDKGFDVNFERLLTEIRERDDRDRNRATAPLKPAEDALVVDSTAMTIDEVLATVLA YAEQQLGDASAS" misc_feature complement(2603480..2604145) /locus_tag="B565_2311" /note="cytidylate kinase; Provisional; Region: cmk; PRK00023" /db_xref="CDD:178800" misc_feature complement(2603540..2604136) /locus_tag="B565_2311" /note="Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor; Region: CMPK; cd02020" /db_xref="CDD:73296" misc_feature complement(order(2603591..2603593,2603759..2603764, 2603825..2603827)) /locus_tag="B565_2311" /note="CMP-binding site; other site" /db_xref="CDD:73296" misc_feature complement(order(2603600..2603602,2603612..2603614)) /locus_tag="B565_2311" /note="The sites determining sugar specificity; other site" /db_xref="CDD:73296" gene 2604403..2604996 /locus_tag="B565_2312" /db_xref="GeneID:10488229" CDS 2604403..2604996 /locus_tag="B565_2312" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase II" /protein_id="YP_004392964.1" /db_xref="GI:330830012" /db_xref="GeneID:10488229" /translation="MSSVTLVAKSKLPTPWGTFTLVGFQETGTGKDHAALVMGDITGD EPVLGRIHSECLTGDALFSLRCDCGFQLQAAMENIAKAGRGVLLYVRQEGRGIGLLNK IRAYHLQDQGADTVEANVALGFAADMRDYTICADMLKQLEVKSLKLMTNNPRKMKAME SFGIPVAERVPLQEGRNPHNEFYLSTKANKLDHMLKK" misc_feature 2604409..2604987 /locus_tag="B565_2312" /note="GTP cyclohydrolase II (RibA). GTP cyclohydrolase II catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5' phosphate, formate, pyrophosphate (APy), and GMP in the biosynthetic pathway of riboflavin. Riboflavin is the...; Region: GTP_cyclohydro2; cd00641" /db_xref="CDD:88311" misc_feature 2604412..2604987 /locus_tag="B565_2312" /note="GTP cyclohydrolase II [Coenzyme metabolism]; Region: RibA; COG0807" /db_xref="CDD:31150" misc_feature order(2604421..2604441,2604463..2604465,2604469..2604477, 2604496..2604498,2604502..2604504,2604508..2604510, 2604562..2604564,2604568..2604573,2604577..2604591, 2604595..2604597,2604616..2604621,2604628..2604630, 2604667..2604669,2604673..2604675,2604697..2604702, 2604709..2604714,2604718..2604723,2604730..2604732) /locus_tag="B565_2312" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:88311" misc_feature order(2604550..2604567,2604571..2604573,2604598..2604600, 2604604..2604606,2604613..2604615,2604676..2604687, 2604706..2604708,2604718..2604720,2604727..2604729, 2604745..2604747,2604781..2604783,2604787..2604789, 2604850..2604858,2604865..2604867) /locus_tag="B565_2312" /note="active site" /db_xref="CDD:88311" gene complement(2605078..2606034) /locus_tag="B565_2313" /db_xref="GeneID:10488230" CDS complement(2605078..2606034) /locus_tag="B565_2313" /codon_start=1 /transl_table=11 /product="HTH-type transcriptional regulator CysB" /protein_id="YP_004392965.1" /db_xref="GI:330830013" /db_xref="GeneID:10488230" /translation="MKLQQLRYIVEVANHRLNLSATAESLFTSQPGISKQVRMLEDEL GIQIFERSGKHLTQITPIGRDVIKVAAEVLDKVATIKVMARQHVHPEQGTLTIAATHL QARYILPAILKGFMARFPKVAVTVMQGSAAQCRVAVHDGTADLLLADEPEEGSDLLML PSFQWQRGLVLPKDHPLAKATSLTPAELVEFTLVTDGRALSAAHGTDCAHAESRIACC ASDSDVLKTYVRQGMGIGVMATFAWEPQRDGDLVLKTAPWLPGGVATIGLRRGAFLCG YLYDLIERLAPQLTRERVEQYCAARTGEELEELLANLTVPLR" misc_feature complement(2605081..2606034) /locus_tag="B565_2313" /note="transcriptional regulator CysB; Reviewed; Region: cysB; PRK12681" /db_xref="CDD:183678" misc_feature complement(2605843..2606028) /locus_tag="B565_2313" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(2605180..2605755) /locus_tag="B565_2313" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature complement(order(2605342..2605347,2605351..2605356, 2605372..2605389,2605651..2605671,2605675..2605677, 2605687..2605689,2605696..2605701,2605705..2605710)) /locus_tag="B565_2313" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene complement(2606098..2606973) /locus_tag="B565_2314" /db_xref="GeneID:10488231" CDS complement(2606098..2606973) /locus_tag="B565_2314" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="YP_004392966.1" /db_xref="GI:330830014" /db_xref="GeneID:10488231" /translation="MDLKQLTYLLAVRDAGSFTKAANSLHVAQPAISMAIAKLEQQLE LRLFDRQDRAVRLTPEGEVLCRHAERLLLQMHQAEAEMAELKGLERGEVRIGIPYMMG SYYFPPRLMAFKHRYPGLKIRVEEAGTRELLSRMVDGSLDLAILITSDLPPAIEGAHL LSEEMLMVVGDDHPLRGASAVTLSQFFAQELALFRRGFYHREHMEALAQSLGVEPDIA FESNLIPLLKAVVRQGFAVTTFLRMVLEEEPDLSGVPFDPPIYLDLCVAWRRGDPLSM ANRALRDFLLKERPA" misc_feature complement(2606107..2606973) /locus_tag="B565_2314" /note="DNA-binding transcriptional regulator CynR; Provisional; Region: PRK11242" /db_xref="CDD:183051" misc_feature complement(2606788..2606967) /locus_tag="B565_2314" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(2606119..2606700) /locus_tag="B565_2314" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cd05466" /db_xref="CDD:176102" misc_feature complement(order(2606275..2606280,2606284..2606289, 2606305..2606322,2606596..2606616,2606620..2606622, 2606632..2606634,2606641..2606646,2606650..2606655)) /locus_tag="B565_2314" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene 2607069..2608292 /locus_tag="B565_2315" /db_xref="GeneID:10488232" CDS 2607069..2608292 /locus_tag="B565_2315" /codon_start=1 /transl_table=11 /product="major facilitator superfamily permease" /protein_id="YP_004392967.1" /db_xref="GI:330830015" /db_xref="GeneID:10488232" /translation="MIEVGSREWIRATLALSLGSFLVFLNLYQTHPLLPLIAEVFSVN SLSASWTLAGCTAGLAASLLICARLADRHGRRQVMLGTLTLAILLSLLIPLVEQFGSL LLLRILQGALLAGLPATAIAYMGEEFSKRALLSAVGVYIAANSLGGIAGRVVGGLLAG WFGDWQHTFLGIGVISLLLLPLVFWLLPHQTRFVASAPVRGQFARALQQHLTNPLLVG AYLIGGLNFMVFLNQFSYLTFLLAKPPFSLPTQWLGMLFLTYLSGTVASSLSGRFANR WGAQRMLLVGIALMAIGSLWLLQGSLPGILSGLLISSFGFFLAHACASAWVGHHVEHN RALASSLYLVAYYLGASLGGLYLHPFWEQGELGGLVMGIELVLILTAGLSLWLGRLKQ RSQSPLPAQQPHRHG" misc_feature 2607105..>2607956 /locus_tag="B565_2315" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature order(2607147..2607149,2607156..2607164,2607168..2607173, 2607222..2607224,2607231..2607236,2607243..2607245, 2607255..2607260,2607264..2607269,2607405..2607410, 2607417..2607422,2607429..2607434,2607441..2607443, 2607477..2607482,2607489..2607494,2607510..2607512, 2607747..2607749,2607756..2607761,2607768..2607773, 2607780..2607782,2607822..2607824,2607834..2607836, 2607846..2607848,2607855..2607857,2607867..2607869) /locus_tag="B565_2315" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene complement(2608437..2608949) /locus_tag="B565_2316" /db_xref="GeneID:10488233" CDS complement(2608437..2608949) /locus_tag="B565_2316" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392968.1" /db_xref="GI:330830016" /db_xref="GeneID:10488233" /translation="MAPFVSQLLAELAATGVTISRPTVDHLCYRAATLQEYCALCAVL AEAGTLLVEGMIGGRPIATYQLHQPLLVGEVQVPCIELAAPKPGRVHQAGLEHIELVV TSLQDLVARYPELPFKTGNMQDTRNPDIGLMLPSGQIKFHLRPLAEVIAEEVATGAVV AVPADYFDQE" misc_feature complement(2608524..2608883) /locus_tag="B565_2316" /note="This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins; Region: Glo_EDI_BRP_like; cl14632" /db_xref="CDD:196803" misc_feature complement(order(2608530..2608532,2608536..2608538, 2608557..2608559,2608659..2608661,2608701..2608703, 2608707..2608709,2608767..2608769,2608860..2608862, 2608872..2608874)) /locus_tag="B565_2316" /note="active site" /db_xref="CDD:176657" misc_feature complement(order(2608530..2608532,2608659..2608661, 2608872..2608874)) /locus_tag="B565_2316" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:176657" gene complement(2608985..2609749) /locus_tag="B565_2317" /db_xref="GeneID:10488234" CDS complement(2608985..2609749) /locus_tag="B565_2317" /codon_start=1 /transl_table=11 /product="DNA repair ATPase" /protein_id="YP_004392969.1" /db_xref="GI:330830017" /db_xref="GeneID:10488234" /translation="MILTLVLLSIGALLFLVIAYNVVQQYKQKAEADKRHAVARHKTV ADETEEVLLNVNLVPFSKNMVLLLQHRILDAYRAIAQVMPNNQIKQRIVDVQTQIKNV QENYSVQDEGQFKTPESDRQAIQMLQLVKKMRAVLRVEHNKGKIDPQGFAQEERRLEL MQLKINISNLVKRAMDARIQGQYGTCRQLYTKGLSAMASVGDKDPYLLAREEDMRQGL KELEELQQQNSAQDLQNIKDKEADELDVLFQPKKKW" gene complement(2609941..2610666) /locus_tag="B565_2318" /db_xref="GeneID:10488235" CDS complement(2609941..2610666) /locus_tag="B565_2318" /codon_start=1 /transl_table=11 /product="NADPH-flavin oxidoreductase" /protein_id="YP_004392970.1" /db_xref="GI:330830018" /db_xref="GeneID:10488235" /translation="MNQTIDLILSHRSIRQFTAEPIAPQQLDAILAAAQSASTSSFLQ VTSIVRVCEPEARQQLAMLAGNQPYVVQAAEFLVFCADYHRHTQIVPEAQTGYAEQLL IGAIDGALMAQNALLAAQSLGLGGVYIGGIRNHPAEVSELLGLPHQVIPLFGLCLGHP AQQPEQKPRLPRGLVVHQERYQHELDRDLLARYDQQIADYYQARSSNNKQQTWSGQIR AILGKESRPFMLGFLQSRGFNLK" misc_feature complement(2609989..2610657) /locus_tag="B565_2318" /note="This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH...; Region: NfsA_FRP; cd02146" /db_xref="CDD:48392" misc_feature complement(order(2609989..2609991,2609998..2610006, 2610028..2610030,2610088..2610090,2610136..2610144, 2610157..2610165,2610238..2610240,2610268..2610270, 2610304..2610306,2610316..2610318,2610325..2610330, 2610337..2610339,2610358..2610360,2610421..2610423, 2610499..2610501,2610508..2610513,2610517..2610525, 2610529..2610531,2610535..2610537,2610541..2610543, 2610553..2610564,2610568..2610570,2610634..2610636, 2610640..2610645,2610655..2610657)) /locus_tag="B565_2318" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48392" misc_feature complement(order(2610160..2610162,2610166..2610168, 2610208..2610210,2610265..2610270,2610274..2610279, 2610460..2610462,2610466..2610468,2610622..2610624, 2610628..2610630,2610634..2610636)) /locus_tag="B565_2318" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:48392" misc_feature complement(order(2610055..2610057,2610064..2610069, 2610166..2610168,2610172..2610174,2610265..2610270, 2610541..2610543,2610622..2610624)) /locus_tag="B565_2318" /note="NADPH bind site [chemical binding]; other site" /db_xref="CDD:48392" gene complement(2610738..2612303) /locus_tag="B565_2319" /db_xref="GeneID:10488236" CDS complement(2610738..2612303) /locus_tag="B565_2319" /codon_start=1 /transl_table=11 /product="aminobenzoyl-glutamate transport protein" /protein_id="YP_004392971.1" /db_xref="GI:330830019" /db_xref="GeneID:10488236" /translation="MSHAAVNDRPASPPKGWLNRFLNGVEKAGNKLPDPAMLFLYALL IVWVGSWVLSQFQFDLVNPRTGEAVVVNNLLTGAGLAEFLSTMVTTFTGFAPLGIVLV AMLGVGVAEQSGFINTGLKKLLKVTPARFLTPMLILVAIVSHTAADAGYVLVIPIGGI IFHAAGRHPLAGIAAAFAGVSGGFAANFLPSGGDALLQGFTQSAAQLLDPDYMVNTLC NIIFTGASSLLIICVGWFITEKVVEPRLKHVALNEDLESADEMGRYSAQESRAFNWAG FAMLAAIVLLALALSPSDSPLRAADGSLTTFAAPVMKSIVPLIFLLFILPGIVYGFVA GSFKSGKDVIDAMSATMNKMGSYMVMAFFCALFIKAFGDSNLGTLLALSGAEVLHALA LPGEVTIVGMILLTASVNLVVGSASAKWALISPILVPMLMAVGISPELTQAAYRVGDS ASNIITPLMVFFPLVVVYCQQYVKSTGIGTLVSMMLPYSLAFLVSWTIFLLLYWALGF PLGLQAPYVYPAP" misc_feature complement(2610741..2612246) /locus_tag="B565_2319" /note="p-Aminobenzoyl-glutamate transporter family; Region: ydaH; TIGR00819" /db_xref="CDD:188086" misc_feature complement(2610750..2612246) /locus_tag="B565_2319" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene complement(2612447..2614399) /locus_tag="B565_2320" /db_xref="GeneID:10488237" CDS complement(2612447..2614399) /locus_tag="B565_2320" /codon_start=1 /transl_table=11 /product="PAS:GGDEF domain-containing protein" /protein_id="YP_004392972.1" /db_xref="GI:330830020" /db_xref="GeneID:10488237" /translation="MDVLHTPIWVYDIEHHHIFWANSAALSVWEATSLDELCSRDFSA DMATAIDLLLQRYLGDFQQGRSYNEWWTLSPKGVKKQIYLRLSGIQLAGRLMMMTEAV LDSDTLYQESSLATGDTLACLFDSHGVFESGNYHFEMCFGHQIAKLSQVFSGNDDSFY QKLSRLDEVVTEGECRTLKGMRWFQYQFRYIQQGARILLTMRDITDRKLEELEHRHLA WHDSLTGLLNRYGLMKSLEAYCGLGERFALVFMDLDNFKLVNDNYGHKAGDRLLERVA GRLKQICPRDVELARLGGDEFTALVPLGNQGDRAQEVADQMLSQMTKPLQLSGLPEVT IGGSIGIAIYPDDADDGDNLITRADMAMYQAKQMGRLRWQRFTPSMQQTLQRKLNLKQ FLAKAIGRQELSLCYQPQVDAAKRRLIGYEALLRWYNPVLGHVSPVEFIPLAEEMGLI REIGSWVLSTALAQVASWQKRFHQRVPVSVNLSGFQLSSALPGQVRQQLELHGVDASL LTLELTETVLMLDMKGCLGILDDLSEQGIKIAIDDFGTGYSSLAYLNRLPINNIKLDR SFVVGLNLPVIRATAAMATNLGLGIMAEGVEEPHELAALQTQGCHVFQGYLFSKPLTV AQVEASGFVVECQVGRYPLLDAVMAE" misc_feature complement(2613278..2613742) /locus_tag="B565_2320" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(2613515..2613517,2613644..2613646)) /locus_tag="B565_2320" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(2613512..2613523,2613527..2613529, 2613593..2613595,2613605..2613607,2613617..2613622, 2613629..2613631)) /locus_tag="B565_2320" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(2613452..2613454,2613539..2613541)) /locus_tag="B565_2320" /note="I-site; other site" /db_xref="CDD:143635" misc_feature complement(2612522..2613220) /locus_tag="B565_2320" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:30163" gene 2615261..2616199 /locus_tag="B565_2321" /db_xref="GeneID:10488238" CDS 2615261..2616199 /locus_tag="B565_2321" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004392973.1" /db_xref="GI:330830021" /db_xref="GeneID:10488238" /translation="MKHIEEFYLFVKVVQEGGFSHAAAALGMPTGTISRRISQLEEQL GCSLLHRSTRKLRLTDDGLRYYERLCTPLAQIEQATSEIQGQEADITGLIRIAAPIAL SNTILIDMLAEFGLHYPEVQFDITQTNDHQHLFDNDRDLVFFNGELPQSLPNAICLGH IEYGLFASPLYLTKKGTPSHPNQLEEHDLIYCWPHQHWQLTDKDGQSVCIKRSAKLTV NQTQAAVRAARRHLGIVNAPLHYLSSFLHDEQLVPVLTDWQTGNRPFYMLCCQHQFAP LRVKMFVEFVEKYSARYRNRQWDNQFSQGDSLTHCI" misc_feature 2615270..2616148 /locus_tag="B565_2321" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature 2615270..2615446 /locus_tag="B565_2321" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 2615534..2616118 /locus_tag="B565_2321" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(2615564..2615566,2615576..2615578,2615693..2615695, 2615735..2615737,2615741..2615743,2615921..2615923, 2615972..2615974,2616053..2616055) /locus_tag="B565_2321" /note="putative effector binding pocket; other site" /db_xref="CDD:176114" misc_feature order(2615567..2615572,2615582..2615587,2615591..2615596, 2615603..2615605,2615615..2615617,2615621..2615641, 2615822..2615824,2615903..2615917,2615936..2615941, 2615948..2615950) /locus_tag="B565_2321" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 2616254..2617276 /locus_tag="B565_2322" /db_xref="GeneID:10488239" CDS 2616254..2617276 /locus_tag="B565_2322" /codon_start=1 /transl_table=11 /product="response regulator" /protein_id="YP_004392974.1" /db_xref="GI:330830022" /db_xref="GeneID:10488239" /translation="MNVLICDDSGFARKQLARALPADWKVDLHYAANGLEGIEQVLMG HGDLIFLDLTMPEMDGYGVLETLQREGLRSKVIVVSGDIQPEAYQRVMGLGALDFIKK PAAPETLLALLKKHDFWSAAPSGQPSAPEQQPNGVVADAGVKITPEIRDVYQELANVS MGQAADLLARLLNAFVVLPIPNVNVLEVSELHMALSAAADSDTLSAVCQGFIGAGIAG EALILFHDSSFKDLAKLMNHQGTLDRTAELELLMDTANVLIGAFLRGYANQLDTPFSQ GHPVVLGQHRPINELINTNKSRWRRTLAIEINYRIQDYAVQCDLLLLFTEDSIATMNN KIMHML" misc_feature 2616260..2616595 /locus_tag="B565_2322" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature 2616263..2616601 /locus_tag="B565_2322" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(2616272..2616277,2616407..2616409,2616431..2616433, 2616491..2616493,2616548..2616550,2616557..2616562) /locus_tag="B565_2322" /note="active site" /db_xref="CDD:29071" misc_feature 2616407..2616409 /locus_tag="B565_2322" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(2616416..2616421,2616425..2616433) /locus_tag="B565_2322" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 2616557..2616565 /locus_tag="B565_2322" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 2616680..2617273 /locus_tag="B565_2322" /note="Chemotaxis protein CheC, inhibitor of MCP methylation [Cell motility and secretion / Signal transduction mechanisms]; Region: CheC; COG1776" /db_xref="CDD:31962" gene 2617285..2617716 /locus_tag="B565_2323" /db_xref="GeneID:10488240" CDS 2617285..2617716 /locus_tag="B565_2323" /codon_start=1 /transl_table=11 /product="GGDEF domain-containing protein" /protein_id="YP_004392975.1" /db_xref="GI:330830023" /db_xref="GeneID:10488240" /translation="MEIREFHWLMNIVQNLDVGLVVLDKEYKVQVWNGFMESHSGRLA SDVRDGVLFELFPDVDRAWFERKANMVFKLNNRAFSTWEQKPYLLRFSNYRPITGSAP HMFQNLTLVPLADFGGQVTHIAVMIYDATDEAMLMSGQRQA" misc_feature 2617303..2617482 /locus_tag="B565_2323" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature 2617327..2617686 /locus_tag="B565_2323" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:117025" gene complement(2617806..2618825) /locus_tag="B565_2324" /db_xref="GeneID:10488241" CDS complement(2617806..2618825) /locus_tag="B565_2324" /codon_start=1 /transl_table=11 /product="L-allo-threonine aldolase" /protein_id="YP_004392976.1" /db_xref="GI:330830024" /db_xref="GeneID:10488241" /translation="MRYIDLRSDTVTQPTDAMRQAMLHAEVGDDVYGEDPGVNALEAF GARLLGKQAALFVPSGTMSNLLAVMSHCQRGEGAILGNAAHIYRYEAQGSAVLGSVAL QPLPMQRDGTLAFDDIKAALAPDDAHFVQTRLICLENTHNGKVLPLSYLQEMGAFVAE RGLKLHLDGARLFNAAVASETPVEVIAAPFDSISICLSKGLGAPVGSLLVGSHDFIAR ARRLRKMLGGGMRQAGILAQAGLFALEQHVTRLADDHRRAKRLAEGLAALPGIELDLS LVQSNMVFLRLREGESAPLLAFMKERGILFSGYGELRLVTHLQINDDDIEEVIDAFTE YLGAR" misc_feature complement(2617830..2618813) /locus_tag="B565_2324" /note="Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a...; Region: TA_like; cd06502" /db_xref="CDD:99748" misc_feature complement(2617965..2618813) /locus_tag="B565_2324" /note="Beta-eliminating lyase; Region: Beta_elim_lyase; pfam01212" /db_xref="CDD:189890" misc_feature complement(order(2618118..2618123,2618151..2618156, 2618163..2618168,2618211..2618213,2618229..2618234, 2618517..2618525,2618544..2618567,2618619..2618621, 2618640..2618645,2618652..2618654,2618754..2618762, 2618769..2618771,2618787..2618798,2618805..2618807)) /locus_tag="B565_2324" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:99748" misc_feature complement(order(2618229..2618231,2618238..2618240, 2618313..2618315,2618322..2618324,2618412..2618414, 2618634..2618636,2618643..2618648)) /locus_tag="B565_2324" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99748" misc_feature complement(2618229..2618231) /locus_tag="B565_2324" /note="catalytic residue [active]" /db_xref="CDD:99748" gene complement(2618938..2619639) /locus_tag="B565_2325" /db_xref="GeneID:10488242" CDS complement(2618938..2619639) /locus_tag="B565_2325" /codon_start=1 /transl_table=11 /product="Short chain dehydrogenase" /protein_id="YP_004392977.1" /db_xref="GI:330830025" /db_xref="GeneID:10488242" /translation="MSYLILGSGALGSALARELMARGESFLLAGRTYPKGIEMGAFFP LQEVDAISFDALFTLYDTDPLPTVVINTIGLLHDVSFMPERRVEEVHPKWLCDSLLAN AWPTLALAARFSRLMGSDHPLWLCAISDLAGSITSNLEGGRYSYRMSKAALDMGVKTL ALEWAQRFPQAGVVAVAPGLMDSPMNAPFLSELPADQLQDPAEVAGKLLNLIKGLSLT QSGQLLDLNGQPLPW" misc_feature complement(2618941..>2619438) /locus_tag="B565_2325" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(order(2619097..2619108,2619190..2619192, 2619202..2619204,2619250..2619258,2619418..2619426)) /locus_tag="B565_2325" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature complement(order(2619190..2619192,2619202..2619204, 2619250..2619252,2619334..2619336)) /locus_tag="B565_2325" /note="active site" /db_xref="CDD:187535" gene complement(2619727..2620134) /locus_tag="B565_2326" /db_xref="GeneID:10488243" CDS complement(2619727..2620134) /locus_tag="B565_2326" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_004392978.1" /db_xref="GI:330830026" /db_xref="GeneID:10488243" /translation="MEGFAERLQSLIGEMSVSAFARKVGLSEALIRKYLKGAEPGLAR ANQIAMGANCSLEWLATGCGYLYRQAEVVDREALAAAQLLLGEQQPGVGLPDEEALVT LLAYYQFLRTHKKADGFLDLALAREFGRHLGEA" gene 2620222..2621181 /locus_tag="B565_2327" /db_xref="GeneID:10488244" CDS 2620222..2621181 /locus_tag="B565_2327" /codon_start=1 /transl_table=11 /product="oxidoreductase, aldo/keto reductase family" /protein_id="YP_004392979.1" /db_xref="GI:330830027" /db_xref="GeneID:10488244" /translation="MRAVIYVAHRFRIVFFKESTMSVSRVALHPQGPTFSRLIMGYWR LMEWQLSPAALLDLMKYHLDLGVTTIDHADIYGGYQCEEAFGHALRLEPSLRSRMEIV TKCGIALTAKPEHALNHYNTGKDHIIASAEASLRKLGTDHLDLLLIHRPDPLMNADEV ADAFITLKQAGKIKHAGVSNFTARQFELLQSRLPFPLVTNQLEISPLHQEGTLDGTLD QCQQLGIKPMAWSCLGGGRLFSDDACAPLRAELEQIRQEVGAQTIEQVVYAWVMMLPS QPLPLIGSGKRERIAAAVATESIVLNRQQWFRIRKAALGYDVP" misc_feature 2620294..2621157 /locus_tag="B565_2327" /note="Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance to both health and...; Region: Aldo_ket_red; cd06660" /db_xref="CDD:119408" misc_feature 2620330..2621160 /locus_tag="B565_2327" /note="Aldo/keto reductase family; Region: Aldo_ket_red; pfam00248" /db_xref="CDD:189468" misc_feature order(2620342..2620350,2620432..2620434,2620447..2620449, 2620531..2620533,2620666..2620671,2620756..2620761, 2620822..2620824,2620909..2620926,2621011..2621013, 2621062..2621073,2621086..2621088,2621095..2621100) /locus_tag="B565_2327" /note="active site" /db_xref="CDD:119408" misc_feature order(2620432..2620434,2620447..2620449,2620531..2620533, 2620666..2620668) /locus_tag="B565_2327" /note="catalytic tetrad [active]" /db_xref="CDD:119408" gene complement(2621253..2621501) /locus_tag="B565_2328" /db_xref="GeneID:10488245" CDS complement(2621253..2621501) /locus_tag="B565_2328" /codon_start=1 /transl_table=11 /product="RNA-binding protein" /protein_id="YP_004392980.1" /db_xref="GI:330830028" /db_xref="GeneID:10488245" /translation="MTADELKTLFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGDA EKAIAGLHGTEVGGRTITVNQAKPKTDAPRGRPQQRHR" misc_feature complement(2621310..2621501) /locus_tag="B565_2328" /note="RRM (RNA recognition motif), also known as RBD (RNA binding domain) or RNP (ribonucleoprotein domain), is a highly abundant domain in eukaryotes found in proteins involved in post-transcriptional gene expression processes including mRNA and rRNA...; Region: RRM; cd00590" /db_xref="CDD:100104" misc_feature complement(order(2621397..2621399,2621403..2621405)) /locus_tag="B565_2328" /note="RNA/DNA binding site [nucleotide binding]; other site" /db_xref="CDD:100104" misc_feature complement(2621310..2621315) /locus_tag="B565_2328" /note="RRM dimerization site [polypeptide binding]; other site" /db_xref="CDD:100104" gene complement(2621751..2622293) /locus_tag="B565_2329" /db_xref="GeneID:10488246" CDS complement(2621751..2622293) /locus_tag="B565_2329" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392981.1" /db_xref="GI:330830029" /db_xref="GeneID:10488246" /translation="MRITSLLAGSQVQLLMPPAVRYRCVIFLLLLVSWGVVAASLWDG WGAMALLNWVGVVFGGITGIMVSLPRSWQPWRLAELGWDEQHIYLLNGNKDEALALPR SQLVALERERRVGHDGQWLDFSLDLQLSEEELAAAMALLDLNAGELHLVSPSVYRFGF KRAWHGRRMLAQRLSDLQSA" gene 2622424..2623170 /locus_tag="B565_2330" /db_xref="GeneID:10488247" CDS 2622424..2623170 /locus_tag="B565_2330" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter ATP-binding protein" /protein_id="YP_004392982.1" /db_xref="GI:330830030" /db_xref="GeneID:10488247" /translation="MTSSQPCVRFCGVDKFYGDFQALHHIDLTIERGEKWVICGPSGS GKSTLIRTINGLEGIDDGQLFLFGEQVTPSYLRRLQGRVGMVFQQFNLFPHMTVLENL MVAPVHTLGLRPQEAKARALGLLERVRIQAQADKYPHQLSGGQQQRVAIARSLCMQPE LMLFDEPTSALDPEMIREVLDVIRELADEGMTLICVTHEMGFARQVADRVLFMDEGKI IESAPPAQLFNAPRHPRTRAFLEQVLSYHG" misc_feature 2622439..2623155 /locus_tag="B565_2330" /note="ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; Region: GlnQ; COG1126" /db_xref="CDD:31323" misc_feature 2622457..2623077 /locus_tag="B565_2330" /note="HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP; Region: ABC_HisP_GlnQ_permeases; cd03262" /db_xref="CDD:73021" misc_feature 2622541..2622564 /locus_tag="B565_2330" /note="Walker A/P-loop; other site" /db_xref="CDD:73021" misc_feature order(2622550..2622555,2622559..2622567,2622685..2622687, 2622916..2622921,2623015..2623017) /locus_tag="B565_2330" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73021" misc_feature 2622676..2622687 /locus_tag="B565_2330" /note="Q-loop/lid; other site" /db_xref="CDD:73021" misc_feature 2622844..2622873 /locus_tag="B565_2330" /note="ABC transporter signature motif; other site" /db_xref="CDD:73021" misc_feature 2622904..2622921 /locus_tag="B565_2330" /note="Walker B; other site" /db_xref="CDD:73021" misc_feature 2622928..2622939 /locus_tag="B565_2330" /note="D-loop; other site" /db_xref="CDD:73021" misc_feature 2623003..2623023 /locus_tag="B565_2330" /note="H-loop/switch region; other site" /db_xref="CDD:73021" gene 2623163..2623960 /locus_tag="B565_2331" /db_xref="GeneID:10488248" CDS 2623163..2623960 /locus_tag="B565_2331" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter permease" /protein_id="YP_004392983.1" /db_xref="GI:330830031" /db_xref="GeneID:10488248" /translation="MARLNRPRLLGWLSGTVMLSALLGWALYSGARQMGYEWQWPRVL PFLGEWDEGTFYAGPLLNGLLVTLQVALLSLLGTMAVGVCVVSLRLLPSRLGPWLAIA YLALVRTTPQLVQLYILYFLLGPMLGLAPLACAVLSLSLYQGAFTAEVLRAGVQAIPK GQWEAAQSLGLSRAITLRKVILPQLVRITLPPLTNELVSLIKHSALVSVIAIFDLTNE GRTLVADTFLTFEVWFTVATLYLLLTLTLSACSRALARHLNPDQQGR" misc_feature 2623394..>2623795 /locus_tag="B565_2331" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(2623400..2623405,2623412..2623417,2623430..2623432, 2623460..2623471,2623475..2623504,2623511..2623516, 2623520..2623522,2623583..2623588,2623592..2623594, 2623598..2623600,2623607..2623612,2623616..2623618, 2623628..2623633,2623640..2623642,2623691..2623693, 2623733..2623738,2623745..2623747,2623766..2623777, 2623784..2623789) /locus_tag="B565_2331" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(2623478..2623522,2623766..2623783) /locus_tag="B565_2331" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(2623520..2623522,2623568..2623570,2623784..2623786) /locus_tag="B565_2331" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(2623643..2623681,2623697..2623702,2623712..2623714) /locus_tag="B565_2331" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 2623963..2624784 /locus_tag="B565_2332" /db_xref="GeneID:10488249" CDS 2623963..2624784 /locus_tag="B565_2332" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter periplasmic amino acid-binding protein" /protein_id="YP_004392984.1" /db_xref="GI:330830032" /db_xref="GeneID:10488249" /translation="MNLSFKTTLSGAALLLTSLLTPALAQTAPSDTQAQIEQSGTLRV GMSTFAPWAMRDKQGALIGFEIDVARRLATDNGWQVEFVPTAWDGIIPSLLAKKYDVI IGGLTITPEREKSVRFTQAYSHSGVQLAASSTMAKEKKTVADFNQRGVILAVRRGASP VQVAKEHFPKATLRQFDDESQVFQEVLNGRAHGALSSSPKPEQEALRHPDALFMPFAE PLAQGDEGFALRKGDDALAEQFNEWIAARQADGWLKARHDYWFKSLAWEAQVANP" misc_feature 2624086..2624745 /locus_tag="B565_2332" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature 2624086..2624745 /locus_tag="B565_2332" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature order(2624107..2624109,2624221..2624223,2624296..2624298, 2624437..2624439,2624551..2624553) /locus_tag="B565_2332" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(2624500..2624502,2624512..2624514,2624530..2624532) /locus_tag="B565_2332" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 2624623..2624640 /locus_tag="B565_2332" /note="hinge residues; other site" /db_xref="CDD:29040" gene 2624784..2625689 /locus_tag="B565_2333" /db_xref="GeneID:10488250" CDS 2624784..2625689 /locus_tag="B565_2333" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter permease" /protein_id="YP_004392985.1" /db_xref="GI:330830033" /db_xref="GeneID:10488250" /translation="MLIALKETIRRIVRGACRNINWLDGAIVLILLLAGLWLASRLHI GVAYQWRWHEAFDLLFTPGPHGELPYFFSGLLTTLRIALLGMVLALLLGTALGVAAFS RRPWLVMPATLFIQLIRNLPPLVFIFIFYFFIANQLLPASGLSRWLGTVSLSPWQEAL FGPPARWENLISGTLCVGMISAAFVAEIVRAGLAAIPRGQWEAAQSLGLSPWVRLRHV ILPQAMLLMLPPLTGQLIALVKDTAIVSLISVQELTFVGTEMANSSGLVYEIWLLVAA AYLFICLSLFVLLSRLEARQGARTC" misc_feature 2624967..2625668 /locus_tag="B565_2333" /note="ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; Region: ArtQ; COG4215" /db_xref="CDD:33942" misc_feature 2625087..2625644 /locus_tag="B565_2333" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(2625114..2625125,2625129..2625158,2625165..2625170, 2625174..2625176,2625318..2625323,2625327..2625329, 2625333..2625335,2625342..2625347,2625351..2625353, 2625363..2625368,2625375..2625377,2625426..2625428, 2625468..2625473,2625480..2625482,2625501..2625512, 2625519..2625524,2625561..2625566,2625594..2625599, 2625606..2625611,2625615..2625620,2625627..2625632, 2625639..2625644) /locus_tag="B565_2333" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(2625132..2625176,2625501..2625518) /locus_tag="B565_2333" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(2625174..2625176,2625234..2625236,2625519..2625521, 2625555..2625557,2625564..2625566,2625594..2625596) /locus_tag="B565_2333" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(2625378..2625416,2625432..2625437,2625447..2625449) /locus_tag="B565_2333" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 2625683..2626420 /locus_tag="B565_2334" /db_xref="GeneID:10488251" CDS 2625683..2626420 /locus_tag="B565_2334" /codon_start=1 /transl_table=11 /product="Murein endopeptidase" /protein_id="YP_004392986.1" /db_xref="GI:330830034" /db_xref="GeneID:10488251" /translation="MLTSLLLATVLQAEAIGGYAAGCLKNGVSLPLEGPGYQVIRTKR LRYYGHPDLIHYLQALANQTRMAGLPDLYIADLAMARGGPFTSGHRSHQTGLDADIWF RMANRPISKWEQDAPKEWALIDEPSYKMLPGRFGPQQLTLLRLAASKPEVARIFVNPV IKSAVCQQAGDEPWVAKLRPWVGHFSHFHLRLRCPVGSPDCEPQAPIPPGNGCGEELA SWLKDKPQLPKVSGINKRPELPARCGN" misc_feature 2625701..2626411 /locus_tag="B565_2334" /note="Penicillin-insensitive murein endopeptidase; Region: Peptidase_M74; cl01538" /db_xref="CDD:186449" gene 2626506..2627096 /locus_tag="B565_2335" /db_xref="GeneID:10488252" CDS 2626506..2627096 /locus_tag="B565_2335" /codon_start=1 /transl_table=11 /product="LemA protein" /protein_id="YP_004392987.1" /db_xref="GI:330830035" /db_xref="GeneID:10488252" /translation="MATSLWRRTTQSLLTLTLLLSLTGCGMNNIPTLDEQVKASWGQV ENQYQRRADLIPNLVATVKGYASHEQETLKAVTDARARVGSVQVSDPAQLKEFEAAQN QLSSALSRLMVVVERYPELKADQQFLALQAQLEGTENRISVARRDYIEAVRQFNTEIR TFPGVIWSKLLYSDLEAKPSFSAKPGADEAPKVSFQ" misc_feature 2626575..2627090 /locus_tag="B565_2335" /note="LemA family; Region: LemA; cl00742" /db_xref="CDD:120079" gene 2627093..2627818 /locus_tag="B565_2336" /db_xref="GeneID:10488253" CDS 2627093..2627818 /locus_tag="B565_2336" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392988.1" /db_xref="GI:330830036" /db_xref="GeneID:10488253" /translation="MKMMLRWFLPCLLLWASALQAAPDFPTLSGRVVDEASLMSRKQA HQLTQQLAAFEKRSGIQLVVVSVDSLDGETIEEYGYQLGRHWGIGQKGKNNGVLLLIA QDERKVRIEVGYGLEGALPDAIAANIIHGRILPAFKRGDMVAGIMAGSQSIMKALAGE YQPVEQPKSDNGGGPWLFILVVIAMIVLHNLRGGGGGGPGGRRRSTYMAGGLGAGSFG GRSGGGFSGGGGSFGGGGASGGW" misc_feature 2627093..>2627659 /locus_tag="B565_2336" /note="Domain of unknown function (DUF477); Region: DUF477; cl01535" /db_xref="CDD:194159" gene 2627839..2628456 /locus_tag="B565_2337" /db_xref="GeneID:10488254" CDS 2627839..2628456 /locus_tag="B565_2337" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392989.1" /db_xref="GI:330830037" /db_xref="GeneID:10488254" /translation="MISKQFFHTLQAKVREAELETDAELVTVLAPASDGYRYIPTLWA ALLAMLTPLLVFQLGFWLGWYEILLVQWSVWLLLSLLFHWTPIKMRLIPKKVRQHRAA LMARLQFVEQGLHRTRDRLGVLIFVSAAEHYVEILVDDGIAQHIDNGQWQEIIDDFVA RVRNKEIEQGFLECVERVSAILTDAFPATRDQNELPDSLIILDKP" misc_feature 2627842..2628444 /locus_tag="B565_2337" /note="Domain of unknown function (DUF477); Region: DUF477; cl01535" /db_xref="CDD:194159" gene 2628602..2628689 /locus_tag="B565_t059" /db_xref="GeneID:10488255" tRNA 2628602..2628689 /locus_tag="B565_t059" /product="tRNA-Ser" /db_xref="GeneID:10488255" gene 2629077..2629835 /locus_tag="B565_2338" /db_xref="GeneID:10490044" CDS 2629077..2629835 /locus_tag="B565_2338" /codon_start=1 /transl_table=11 /product="flagellar motor component MotA" /protein_id="YP_004392990.1" /db_xref="GI:330830038" /db_xref="GeneID:10490044" /translation="MSLIGLVLALIAILGGNMIEGGHPSALLDLPAFLIVIGGTIGAA LTQFPFSVVGSTMRRFKWLLSPLKLDLLEQAQLLETLAGNARRSGMLALEGMIEEIKD PFLKKGVQMMVDGYEKAKIHEVLENEIEFEQEDLEQTVKFYEAMGGYCPTMGIVGAVF GLIHAMGLLDAPDKLGGAIAVAFIATIYGVSAANLIFLPFGNRYKGFAHQIRHYKEMT LTGILCIVDGESQARLQVTLEPYLGGHGGQKEKG" misc_feature 2629125..2629781 /locus_tag="B565_2338" /note="MotA/TolQ/ExbB proton channel family; Region: MotA_ExbB; cl00568" /db_xref="CDD:186086" gene 2629813..2630688 /locus_tag="B565_2339" /db_xref="GeneID:10488256" CDS 2629813..2630688 /locus_tag="B565_2339" /codon_start=1 /transl_table=11 /product="chemotaxis protein MotB" /protein_id="YP_004392991.1" /db_xref="GI:330830039" /db_xref="GeneID:10488256" /translation="MAKKKKAEAPENHERWLVSYADFMTLLFALFVVLYSFAMAKQSE TRVLIQGFIESLGKIGLISPPAGSPLMQGGTGILEPESKTTPSSPKEETVLEKDAPMA ASDPFNETIGASEKPSATEAWPHKTQEQEWVQVTKQKLEQQLKAQIESKDLEVEQLGS QLVIRIGEKALFPADSAFLQPQFIPLVNKIAGILANIPGQVVVTGHTDNSQAPVELYR NNWELSVLRASSIVQTMLTNPQLDARRVIAQGVADTQPRFANDTPEHRQANRRVDITL SQGKAAEESLQLLKP" misc_feature 2629813..2630685 /locus_tag="B565_2339" /note="flagellar motor protein MotB; Reviewed; Region: motB; PRK08944" /db_xref="CDD:181590" misc_feature 2630323..2630640 /locus_tag="B565_2339" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature order(2630332..2630337,2630431..2630436,2630443..2630445, 2630467..2630472,2630479..2630481,2630608..2630610, 2630620..2630622) /locus_tag="B565_2339" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene 2630920..2632989 /locus_tag="B565_2340" /db_xref="GeneID:10488257" CDS 2630920..2632989 /locus_tag="B565_2340" /codon_start=1 /transl_table=11 /product="Hemin receptor" /protein_id="YP_004392992.1" /db_xref="GI:330830040" /db_xref="GeneID:10488257" /translation="MEKARSDDTIIVTGQRVQQKLSDVSGSITVITQEELDRQVASEL THVFRKIPGVSVTGSAGRPQNISVRGIGGNRILLIKDGVRVSDGFGADNINDKVGRFN FDLDDIKQIEVAKGAGSSLHGSDAIGGTVVMNTKQPEDYLQQQDSYLAAKTLYGGDSN KKKLSMTGAVRALESEHLLRLSGWRGNETANFEENRIPADLDGMSASTSSRLPLNTHH ALRLELDYYEDHAKRQMGPKAVPQPDGSWDVVGFQEDGDQRTQGGKFSWEASDLGMVD TLNWSLFGNQSRNEANQRQLLRNDALSGYPRYRSQRTLSTFEELRLGSELELQSKLST GSLDHTFSYGVELEQANHERPVSNLTLEDGITTQGQKAPFSKAETRRDGIWLSDVIDL GNWQFTPTLRFDRQRLRALDSNLAENHSDHLSPSVAASYRFNETWRSWLSYANGFRAP AYDQVYGNIPHYFAMPPFEIIANPNLKEETSHSLEWGVNGQSDNWSVKPAVFYNRYYN FIDWRQTGFRLDDGVFLRQYRNVAKAETWGAELAASLWLSDEWELSTNLAWMDGKDHR GEPLRTQTPLEGNTTLRWQQLDWGVELSGNYAAAMTKVPQCANAQTGYNGACQSSAGW FSLDLTGDWQITEALKVNATIGNLLDTRYVRYQDVAGLPAGSDTSLYSQSGRYLSASL SYRFVGM" misc_feature 2630941..2632977 /locus_tag="B565_2340" /note="TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; Region: TonB-hemlactrns; TIGR01786" /db_xref="CDD:162537" misc_feature 2630998..2632977 /locus_tag="B565_2340" /note="TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel; Region: ligand_gated_channel; cd01347" /db_xref="CDD:73259" misc_feature order(2630998..2631027,2631055..2631084,2631115..2631132, 2631151..2631174,2631232..2631264,2631298..2631324) /locus_tag="B565_2340" /note="N-terminal plug; other site" /db_xref="CDD:73259" misc_feature order(2631784..2631786,2631868..2631870) /locus_tag="B565_2340" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:73259" gene 2632989..2634995 /locus_tag="B565_2341" /db_xref="GeneID:10488258" CDS 2632989..2634995 /locus_tag="B565_2341" /codon_start=1 /transl_table=11 /product="protease II" /protein_id="YP_004392993.1" /db_xref="GI:330830041" /db_xref="GeneID:10488258" /translation="MKHHAIMAALLAAPLAWAQEALPPPIPSQPHLISGSPVRQDPYF WLRDESRSNPAILALLKQQNRWSEQQLAAQQPLEATLRAEFARNPAGEPVPDNWLARG DQAWQLRPDGSLWQRHGGKVQQRLPARAGEGYYEAGGWALSPDNRTLAIAEDRRGDLD YQVTLLDLQSGKVLASLAQRSADIAWSQDGRTLYTIANERYTLRPWQLRGWQDGQEQT LYEEQDPAWLLSLYRTTDGQHLVLQGNNHDSSEQYLLDSGKPQQVKPRQRGVEYYLDS QSGWVIKSNREGAFALYSASTPLSEWQRLWPAKEEDLGDPEKWRLFDRHLVVQFRQQG EDCLALLDRNGHERQRLPLASGAGTGWLQGEHDPASDRILVRSQGLSQPPGQRWLDLN SGHWINDQHTAGNKALPYQSERRWVTSDDGTRVPVSLVWRKDLAPRAVLLYGYGAYGT PMRPYYQKELLSLLDRGFVYAIAHVRGGGMLGEQWTRDGRGIHKQNGISDFIAAGHAL RHWSPDSAPLPLFAMGGSAGGTLVAAALNQQPTLFSGAVLQVPFVDMLGTMSDPALPL TRQEYQEWGNPAKPAEYQAMRRISPYDNLHRAPYPPLLVTTALHDSQVPYWEPVKWLA RLREHSTGSGPYLLLTELEGGHRAGGGDRAREFAFLLHLAGINQ" misc_feature 2633100..2634983 /locus_tag="B565_2341" /note="Protease II [Amino acid transport and metabolism]; Region: PtrB; COG1770" /db_xref="CDD:31956" misc_feature 2634348..2634911 /locus_tag="B565_2341" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" gene 2634992..2637439 /locus_tag="B565_2342" /db_xref="GeneID:10488259" CDS 2634992..2637439 /locus_tag="B565_2342" /codon_start=1 /transl_table=11 /product="Proprotein convertase P-domain-containing protein" /protein_id="YP_004392994.1" /db_xref="GI:330830042" /db_xref="GeneID:10488259" /translation="MTLPLIGSTTMKPLLPALLLGLAGFSTQAAELRFVEQDAPADTR LWLEQQLGITLSNAPAYQRQGKLGHYLHYRQQLNGAPIAGLMAAVSLDEQGRPWRLYH NTRLMQAQAAPCDEASRAGVDAYTATLDSTVWQFAGSDEAQPWYWQDGDTLTAAWRLL AVESQPGNSKSSHWQLFVTCDGSALLGRTLQEANTRAEAVPLAGEAATVQARIFALDP RTQLQDGNLLWRHDLVLDNGAYHTVPLTVQKVDDTYQLSGPRARVVDGTAPETAPFSS PDTDGFQLDHQQPAFLDINGYYHLDLAQRHVESLGYPTLMGGPLAIDTDAGEQDNSLY DPFLRRLEIGRIGVPDAEDPMVIWHEFGHAVQHHILPDMGEEGDWGAIGEGFSDYLAA SWRQRSPEARQFEPFMVFNWDARISGRTPRQLDDLRARYHPGFLYPAHLTINGSNGDQ LWGTPLFTALRQAVEQYGEVARDEFDTLLIESHFGLGPQVRMPQLARVTVDTANRLYP DRSYGKLLEQAFRHHALLPTPIAARLADDSYLLPGEKKSLAIELTNQSGRPLTVADAS LLPTKGLMGDGHWQGELNADGTARWTLPLEAASNLTCGEAVTLPLQFQLTLPSPTERQ TRLDLQLPIGEPLWQRAIGQGGQIKDAVSGERHGLSRFTLTLPESKARIDSGFVVALD LEHSKLEQLEIWLTSPYGTRISLWNKGYASHTRLKGEFPRELVPFESLDKLHGEPLAG RWLLEINDTSAGDTGQLRNWRVAQQVGARCDKDEALPNTGIIPLEQDEGGGGTTSPLL LLLALWPRLWRRSTPRR" misc_feature 2635757..2636560 /locus_tag="B565_2342" /note="Peptidase M36 family also known as fungalysin family; Region: M36; cd09596" /db_xref="CDD:189003" misc_feature order(2636066..2636068,2636078..2636080,2636141..2636143) /locus_tag="B565_2342" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:189003" misc_feature 2637026..2637277 /locus_tag="B565_2342" /note="Proprotein convertase P-domain; Region: P_proprotein; pfam01483" /db_xref="CDD:190003" gene 2637499..2638938 /locus_tag="B565_2343" /db_xref="GeneID:10488260" CDS 2637499..2638938 /locus_tag="B565_2343" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392995.1" /db_xref="GI:330830043" /db_xref="GeneID:10488260" /translation="MKPSVLVIATLSALLSACGGGEDNAPLAIPDYRVDVVLPTVGTL CADLDQNWQCDPADPAVSGEGVVALVSRSANIVNSPLLFVPRSGGLLLAHPAAKGDPQ RLQPTLLSTLWQSRIAEGVAADRALTQLLADLAPLQPGSDRAALAGLGQFDQALQQVA ISLQQQARTRLATAKETQLLTTSYRAISLMLAQLAQEWQRNGQFAEETQSELLTLLVQ QQPRNLLTVTGVTTFSDGNDPLLEQEPDDYPGQDASWNRTRPQLAYRKLDDRGQALPD NAPSWQCVKDLNTGLVWEVKSDDPLSPDWKSRPFAYEDEQFKATAGEQQEAYQHIHKR IEQLTAEGDLAALARAQALTTMLTTRAYQQWLNGEQRCGISQWRLPTMGELMSLMHYG SLAKDPLGQRIIVDTRYFPDIASSEDDTYHGYYWSATSNTAQRFSGGPISKRTVLLLG EDAGTTYPALVQQDTYIELMQVRLVATPQ" gene 2638952..2639521 /locus_tag="B565_2344" /db_xref="GeneID:10488261" CDS 2638952..2639521 /locus_tag="B565_2344" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004392996.1" /db_xref="GI:330830044" /db_xref="GeneID:10488261" /translation="MSLYRFSFAMLALLAPLAHGAAICDDTMDRTAPSARFLDHGNGT VTDQHTGLTWMRCKLGQTWSGSSCLGEPTVYYWQQGLQVAERIRSDSSHALYHFGGIS QWRLPDIKELATLVEHACYKPSLNEAIFPRAMAGGGKEVNEGYVYLMSSTVTSANGQR AYLDITSGDIGLRSIGAYPDQVLLVANKP" misc_feature 2639084..2639302 /locus_tag="B565_2344" /note="Protein of unknown function (DUF1566); Region: DUF1566; pfam07603" /db_xref="CDD:148943" gene 2639900..2640304 /locus_tag="B565_2345" /db_xref="GeneID:10488262" CDS 2639900..2640304 /locus_tag="B565_2345" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit A" /protein_id="YP_004392997.1" /db_xref="GI:330830045" /db_xref="GeneID:10488262" /translation="MFADISAQHWAFAIYVIGAITICLVMIGLAALLGGRAYGRTKNK PFESGVDSVGSARLRFSAKFYLVAMFFVIFDVEALYLFAWSVSVRESGWVGFIEATIF IGLLLIGLIYLWRIGALDWSPRKPQLNNKNSD" misc_feature 2639903..2640265 /locus_tag="B565_2345" /note="NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; Region: Oxidored_q4; cl00535" /db_xref="CDD:186065" gene 2640334..2641008 /locus_tag="B565_2346" /db_xref="GeneID:10488263" CDS 2640334..2641008 /locus_tag="B565_2346" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit B" /protein_id="YP_004392998.1" /db_xref="GI:330830046" /db_xref="GeneID:10488263" /translation="MKYTLTRIDPDAPVERYPQEQRQTVDDPLAQEATRGIMMGRLEE VLQDTVNWGRKNSLWPYNFGISCCYVEMCTAFTSPHDVARFGAEVIRASPRQADFMVI AGTPFIKMAPVIQRLYEQLLEPKWVISMGACANSGGMYDIYSVVQGVDKFLPVDVYIP GCPPRPEAFLQALMLLQDSIGKERRPLSWVVGDQGIYRPQMQAEKERKRGERINVTNL RTPDEI" misc_feature 2640385..2641005 /locus_tag="B565_2346" /note="NADH ubiquinone oxidoreductase, 20 Kd subunit; Region: Oxidored_q6; cl00419" /db_xref="CDD:193811" gene 2641011..2642816 /locus_tag="B565_2347" /db_xref="GeneID:10488264" CDS 2641011..2642816 /locus_tag="B565_2347" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit C/D" /protein_id="YP_004392999.1" /db_xref="GI:330830047" /db_xref="GeneID:10488264" /translation="MKLTRDFPSNYAMAQWQPSDHKDAKVIGELFAHFGAEHFTVQTT RTGVPVVWLPRELLQDVMGFLRKVPSPFVMLFDLSATDERLRSHRDGLPQSDFTVFYH LISIERNADVMLKVGLAESDLHLPTITNHFPNANWYEREVWDLMGITFDGHPHLTRIM MPKSWQGHPLRKDYPARATEFDPFMLDAAKQDMEQENLLFKPEEWGLARGNENEDYMF LNLGPNHPSAHGAFRLVLQLDGEEIRNCVPDIGYHHRGAEKMGERQSWHSYIPYTDRV EYLGGVMNNLPYVLAVEKLAGIKVPQRVDMIRVMMAELFRIQSHLLFLGTYIQDVGAM TPVFFTFTDRQKIYTIIEAITGARMHPAWFRIGGVAHDLPKGWQRLVQDNLLSWLPKR LMDYEKAAMRNSILRGRTIGVSAYTTEQALSWGTTGAGLRATGLNFDVRKWRPYSGYD QFDFEVPVGSNGDAYDRATVRIEEIRQSMSIIEQCMKNMPEGPFKADHPLTTPPPKER TLQHIETLINHFLQVSWGPVMPAAESFQMIEATKGVNSYYLTSDGSTMSYRTRIRTPS FAHLQQIPSVIKGSMVSDLIVYLGSIDFVMSDVDR" misc_feature 2641077..2641619 /locus_tag="B565_2347" /note="Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Region: Complex1_30kDa; cl00539" /db_xref="CDD:193860" misc_feature 2641086..2642813 /locus_tag="B565_2347" /note="bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional; Region: PRK11742" /db_xref="CDD:183294" misc_feature 2641653..2642813 /locus_tag="B565_2347" /note="Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Region: Complex1_49kDa; cl00417" /db_xref="CDD:193809" gene 2642897..2643439 /locus_tag="B565_2348" /db_xref="GeneID:10488265" CDS 2642897..2643439 /locus_tag="B565_2348" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase I subunit E" /protein_id="YP_004393000.1" /db_xref="GI:330830048" /db_xref="GeneID:10488265" /translation="MSQQCQCHNNQTPQGQGACSSKQDDFVLSQAERDAIEHEKHHYE DPRAASIEALKIVQQARGWVPDGAIHAIAAELGIPASDVEGVATFYSQIFRQPVGRHI IRVCDSMVCYINGHEELMAGLKEVMNLGPGQTTPDGRFTLLPVCCLGNCDKGPAIMID DDTYGGLDPVTLLKTLEAYP" misc_feature 2642999..2643433 /locus_tag="B565_2348" /note="NADH-quinone oxidoreductase, E subunit; Region: nuoE_fam; TIGR01958" /db_xref="CDD:131013" misc_feature 2643194..2643433 /locus_tag="B565_2348" /note="TRX-like [2Fe-2S] Ferredoxin (Fd) family, NADH:ubiquinone oxidoreductase (Nuo) subunit E subfamily; Nuo, also called respiratory chain Complex 1, is the entry point for electrons into the respiratory chains of bacteria and the mitochondria of...; Region: TRX_Fd_NuoE; cd03064" /db_xref="CDD:48613" misc_feature order(2643200..2643202,2643206..2643208,2643326..2643334) /locus_tag="B565_2348" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:48613" misc_feature order(2643212..2643214,2643227..2643229,2643335..2643337, 2643347..2643349) /locus_tag="B565_2348" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:48613" gene 2643436..2644821 /locus_tag="B565_2349" /db_xref="GeneID:10488266" CDS 2643436..2644821 /locus_tag="B565_2349" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase I subunit F" /protein_id="YP_004393001.1" /db_xref="GI:330830049" /db_xref="GeneID:10488266" /translation="MSLPQNKILASLGTANRTARTAETHPLTWRLRDDGQPVWLEEYQ AKQGYEAARKALGQMSPDEIVSTVKDAGLKGRGGAGFPTGVKWGLMPKDESMNIRYLL CNADEMEPNTWKDRLLMEQLPHLLIEGMIISARALKAYRGYIFLRGEYVDAAIHLRRA VEEAKAAGLLGKNILGSGFDFELFVHTGAGRYICGEETALINSLEGRRANPRAKPPFP AVSGVWGKPTCVNNVETLCNVPAIIGNGVAWYHGLALPGSEDHGTKLMGFSGKVNNPG VWELPFGITARELFENYAGGMKSGYRLKAWQPGGAGTGFLLPEHLDAQMYTAGIGKVG TRMGTGLAMAVDDSISMVSLLRNMEEFFARESCGWCTPCRDGLPWSVKLLRALERGEG QSGDLATLEQLCGFLGPGKTFCAHAPGAVEPLASAIKYFRSEFEAGIKGSGDNRKPVK GIQPNLLGERW" misc_feature 2643475..2644818 /locus_tag="B565_2349" /note="NADH dehydrogenase I subunit F; Provisional; Region: PRK11278" /db_xref="CDD:183071" misc_feature 2643637..2644155 /locus_tag="B565_2349" /note="Respiratory-chain NADH dehydrogenase 51 Kd subunit; Region: Complex1_51K; pfam01512" /db_xref="CDD:144926" misc_feature 2644240..2644383 /locus_tag="B565_2349" /note="SLBB domain; Region: SLBB; pfam10531" /db_xref="CDD:192616" misc_feature 2644489..2644626 /locus_tag="B565_2349" /note="NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Region: NADH_4Fe-4S; pfam10589" /db_xref="CDD:192637" gene 2644863..2647619 /locus_tag="B565_2350" /db_xref="GeneID:10488267" CDS 2644863..2647619 /locus_tag="B565_2350" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit G" /protein_id="YP_004393002.1" /db_xref="GI:330830050" /db_xref="GeneID:10488267" /translation="MATIYVDGKEYEVDGADNLLQACLSLGLDVPYFCWHPALGSVGA CRQCAVKQYQNADDKRGRLVMSCMTPATDGSYIAIEDEEAKEFRKSVVEWLMTNHPHD CPVCEEGGACHLQDMTVMTGHNSRRYRFTKRTHQNQELGPFIGHEMNRCIACYRCVRY YKDYAGGEDLGVYGAHDNVYFGRVEDGTLESEFSGNLVEVCPTGVFTDKTHSERYNRK WDMQFAPSICQQCSVGCNISPGERYGELRRIENRFHGSVNHSFLCDRGRFGYGYVNLA DRPRQPLLKDGNNQLTITVDGALNRAADALRSARGLIGIGSPRASLESNFALRALVGE ANFYAGVEQAEWACQLKMLQILQQGGVPTPSLRDMEEADAVLVLGEDVTMSAARIALA LRQAVKGKARELARKMKVDLWQVAAVQTLGQNERYPLLITSLDTTRLDDVAADKLHAP YADQARIGFAIANLLDPAAPAVSDLCPEQQAQAARWTELLGNAKKPLIIAGSSARDVA LLEAASNIARALKGRGQEANIALVGQEANSLGLAMLGAQTLSDKPLEAALARIEAEEG LALVTLENDLYRRAPRNRVDAALARLQHLLVIDHQATPTANKADLVLPAASFAEADGT LVNMEGRAQRFFQVYAPAFYNADIQVREGWRWLAALQGAIERKPLRWQNFDQVNHDCA TSNPLLATMLEAAPNAGLRIRGMRLAREPHRYSGRTSMLADQNVSEPRVAQDPDSPFN FSMEGYAGARQPLPQVPFAWAPGWNSPSAWNKFQDEVGGKLRAGDPGRRLLEATDPQA EGKELLGWFTTIPAPFKAAEALQVVNYAQLFGGEELSARSPVIQARMTEPELVLNPLD AQRLALHGGSQVSFSWGGSHWQLRLRLSEQLSAGLVGLPLGVNGLPTALQQASITNLQ EVIA" misc_feature 2644863..2647616 /locus_tag="B565_2350" /note="NADH dehydrogenase subunit G; Validated; Region: PRK08166" /db_xref="CDD:181263" misc_feature 2644881..2645093 /locus_tag="B565_2350" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature order(2644950..2644955,2644962..2644964,2644989..2644991, 2644995..2645006,2645058..2645063) /locus_tag="B565_2350" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature order(2644962..2644964,2644995..2644997,2645004..2645006, 2645061..2645063) /locus_tag="B565_2350" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" misc_feature 2645124..2645246 /locus_tag="B565_2350" /note="NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Region: NADH-G_4Fe-4S_3; pfam10588" /db_xref="CDD:192636" misc_feature 2645535..2646893 /locus_tag="B565_2350" /note="MopB_NDH-1_NuoG2-N7: The second domain of the NuoG subunit (with a [4Fe-4S] cluster, N7) of the NADH-quinone oxidoreductase/NADH dehydrogenase-1 (NDH-1) found in various bacteria. The NDH-1 is the first energy-transducting complex in the respiratory...; Region: MopB_NDH-1_NuoG2-N7; cd02771" /db_xref="CDD:29467" misc_feature order(2645544..2645546,2645553..2645555,2645565..2645567, 2645649..2645651) /locus_tag="B565_2350" /note="[4Fe-4S] binding site [ion binding]; other site" /db_xref="CDD:29467" misc_feature 2647320..2647607 /locus_tag="B565_2350" /note="MopB_CT_NDH-1_NuoG2-N7: C-terminal region of the NuoG-like subunit (of the variant with a [4Fe-4S] cluster, N7) of the NADH-quinone oxidoreductase/NADH dehydrogenase-1 (NDH-1) found in various bacteria. The NDH-1 is the first energy-transducting...; Region: MopB_CT_NDH-1_NuoG2-N7; cd02788" /db_xref="CDD:30320" gene 2647616..2648584 /locus_tag="B565_2351" /db_xref="GeneID:10488268" CDS 2647616..2648584 /locus_tag="B565_2351" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit H" /protein_id="YP_004393003.1" /db_xref="GI:330830051" /db_xref="GeneID:10488268" /translation="MSESLIDLLLEVGKALIVLVGIVGAGAFMSFIERRLLALWQDRY GPNRVGPFGLLQLAADMIKMFFKEDWIPPFADRRIFILAPIIAFTAFILAFAVVPITP TWGVADLNVGLLYILAIAGLAVYAVLFAGWSSNNKYSLLGSLRASAQTLSYEVFLGLS LMGIVIQTGSFNLRDIVEAQADLWNVVPQILGFVTFLFAGVAVTHRHPFDQPEAEQEL ADGYHIEYAGMKWGLFFVGEYIGIVLISSLIVTLFFGGWHGPWLPPFIWFALKTACFM VFFILLRASLPRPRFDQVMSFGWKVCLPLTLINMLVTAAVVLISTQ" misc_feature 2647637..2648563 /locus_tag="B565_2351" /note="NADH dehydrogenase; Region: NADHdh; cl00469" /db_xref="CDD:186018" gene 2648595..2649137 /locus_tag="B565_2352" /db_xref="GeneID:10488269" CDS 2648595..2649137 /locus_tag="B565_2352" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit I" /protein_id="YP_004393004.1" /db_xref="GI:330830052" /db_xref="GeneID:10488269" /translation="MKIVSIIQGVGTQLRSLAMVFSHAWRPRETLNYPEQAVYAAPRY RGRIVLTRDPDGDERCVACNLCAVACPVGCISLQKSEREDGRWYPEFFRINFSRCIFC GLCEEACPTTAIQLTPDFEMGEYRRQDLVYEKEDLLISGPGKYPDYNFYRMSGMAIDG KPKGDAENEAKPIDVKSLLP" misc_feature 2648595..2649047 /locus_tag="B565_2352" /note="NADH dehydrogenase subunit I; Provisional; Region: PRK05888" /db_xref="CDD:180305" misc_feature 2648874..2648939 /locus_tag="B565_2352" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" gene 2649148..2649699 /locus_tag="B565_2353" /db_xref="GeneID:10488270" CDS 2649148..2649699 /locus_tag="B565_2353" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase I subunit J" /protein_id="YP_004393005.1" /db_xref="GI:330830053" /db_xref="GeneID:10488270" /translation="MELAFYASALVAIYSTLRVISTSNPMHALLNLIISLIAVAMIFF CLGAAFAGALQVIVYAGAIMVLFVFVVMMLNLGSAQAQEKKWLTPMTWGGPALLSLIL LGFLAHGILGVTGGLIGVTEVTAKQVGVELFGPYVLAVELASILLLAGLVTAYHLGRE EKSGEVLSVPRSASRSAQEGGQQ" misc_feature 2649148..2649639 /locus_tag="B565_2353" /note="NADH:ubiquinone oxidoreductase subunit J; Provisional; Region: PRK06638" /db_xref="CDD:180642" misc_feature 2649154..>2649336 /locus_tag="B565_2353" /note="NADH dehydrogenase subunit J; Provisional; Region: PRK06433; cl14634" /db_xref="CDD:187397" gene 2649696..2650004 /locus_tag="B565_2354" /db_xref="GeneID:10488271" CDS 2649696..2650004 /locus_tag="B565_2354" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit K" /protein_id="YP_004393006.1" /db_xref="GI:330830054" /db_xref="GeneID:10488271" /translation="MNGIPMEHGLLLAAVLFCIGLCGLLIRRNLLYILMSIEIMMNAS ALAFVVAGSRWAQADGQIMYILVISLAAAEASIGLALLLLLYRRYHTLNVDTVSEMRG " misc_feature 2649705..2650001 /locus_tag="B565_2354" /note="NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; Region: Oxidored_q2; cl00492" /db_xref="CDD:186032" gene 2650001..2651848 /locus_tag="B565_2355" /db_xref="GeneID:10488272" CDS 2650001..2651848 /locus_tag="B565_2355" /codon_start=1 /transl_table=11 /product="proton-translocating NADH-quinone oxidoreductase subunit L" /protein_id="YP_004393007.1" /db_xref="GI:330830055" /db_xref="GeneID:10488272" /translation="MSLLYLTFLFPLLGWLVLAFSLGRFGERTSALIGVGSIGLSALT TLWVGIDFLGNPPEGGVYIQHLWQWMAVGNFTPSFSLALDGLSLTMLGVVTGVGFFIH LFASWYMRGEEGYSRFFTYTNLFIASMLFLVLADDLLFVYLGWEGVGLCSYLLIGFYY KDRKNGAAALKAFVVTRVGDVFLAIGLFILYRELGTLNIHELLVRAPTLFAEGSPALS LACLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFL LAPEILHLVGLVGAITLVLAGFAALVQTDIKRILAYSTMSQIGYMFLALGVGAWEGAI FHLMTHAFFKALLFLSAGAVINACHHEQNIFKMGGLRKSLPLVYACFLVGGSALAALP LVTSGFYSKDAILWQVEASGQSALLWAGLVGAFLTSLYTFRLIFIAFHGQEQTKAHAG HGLAHHLPLLVLLVLSTGIGALIAPPLAGVLPAGPGDHIEEGRHALEVASGIIAIAGI VLAAFLFLGERRLATSIANSAPGRLLSTLWFNAWGFDWLYDQLWVKPYLLATRLVGLD PLDWMMGLPAWLALRGNQLLAWTVTGKLRWYAASMGIGAVLVLALLLLG" misc_feature 2650067..2651809 /locus_tag="B565_2355" /note="NADH:ubiquinone oxidoreductase subunit L; Reviewed; Region: PRK06590" /db_xref="CDD:180633" misc_feature 2650187..2650372 /locus_tag="B565_2355" /note="NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; Region: Oxidored_q1_N; pfam00662" /db_xref="CDD:109709" misc_feature 2650430..2651218 /locus_tag="B565_2355" /note="NADH-Ubiquinone/plastoquinone (complex I), various chains; Region: Oxidored_q1; cl14187" /db_xref="CDD:187256" gene 2651947..2653491 /locus_tag="B565_2356" /db_xref="GeneID:10488273" CDS 2651947..2653491 /locus_tag="B565_2356" /codon_start=1 /transl_table=11 /product="proton-translocating NADH-quinone oxidoreductase subunit M" /protein_id="YP_004393008.1" /db_xref="GI:330830056" /db_xref="GeneID:10488273" /translation="MTLLWILLIPFIGGLLCWQMERLGGQFVRWVALLSMSASLLLSC AIWLSGDFSLATTGLDSAGVSGAASAWAAEWRLPWIPRFGISLHLAVDGLSLLMVILT CFIGVLAILCSWKEIVQRIGFFHLNLLWILGGVLGVFMALDLFLFFFFWEMMLVPMYF LIALWGHSVTDGKSRINAATKFFIYTQVSGLIMLVAIIGLVLTHQHATGVFTFNYLDL LNTPMSKGVQWLLMLGFFIAFAVKMPLVPLHGWLPDAHSQAPTAGSVDLAGILLKTAA YGLLRFALPLFPEASAEFAPYAMVLGLIGIVYGALVAFAQTDIKRLVAYTSISHMGFV MIAIYSGSELALQGAVVQMIAHGLSAAGLFILCGQLYERLHTRDLRQMGGLWGRLRYL PGVMLFFSVASLGMPGTGNFVGEFLILVGSFQVAPVITAVATFGLVLASVYSLIMLQR ACFGPAKDESMLKGLDRRELTMMMVIAGLLVLLGLYPQPVIDTASSSLINVLHWYLLP TAGALQ" misc_feature 2651947..2653488 /locus_tag="B565_2356" /note="NADH:ubiquinone oxidoreductase subunit M; Reviewed; Region: PRK05846" /db_xref="CDD:180285" misc_feature 2652412..2653212 /locus_tag="B565_2356" /note="NADH-Ubiquinone/plastoquinone (complex I), various chains; Region: Oxidored_q1; cl14187" /db_xref="CDD:187256" gene 2653488..2654951 /locus_tag="B565_2357" /db_xref="GeneID:10488274" CDS 2653488..2654951 /locus_tag="B565_2357" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase I subunit N" /protein_id="YP_004393009.1" /db_xref="GI:330830057" /db_xref="GeneID:10488274" /translation="MTFSASQLLALLPLLLTTGAMAALMLAIAWRRCVTTAFTVTIVG LNLALFSLPIVMAQGDQGVTPLLQVDSYAVFYMGLVLIGALATCTFGQSWLKAYPDNR EEFFLLLLIATAGGLVLACSRHLASLFIGIEMLTLPMFGLVGYAYRERHSLEAAVKYM VLSAAATAFLLFGMALLYAQAGSLSFAALGQTLAESPAHHPLLMGGLGLMLVGFAFKL SLAPFHLWTPDVYEGAPAPVATFLATVSKVAVFAVLLRFYLAVPAASDPMIHWLLAAM AVISILVGNLLALVQTNVKRMLGYSSISHFGYLLAVIVASRFGQMPVEAAGVYLLMYL FTSLGAFGVVSMMSSPYRGKDADSLHSYRGLFWKRPYLTAVLTVMMLSLAGIPMTLGF IGKFYLIGVTVEAQLWWLSGAIVLGSALGLYYYLKVMVTLYLREPGMQQRDASADWAL SSGGVVVLLSAALVVLLGLYPQPVISLVQGFQHVVLQ" misc_feature 2653575..2654930 /locus_tag="B565_2357" /note="NADH:ubiquinone oxidoreductase subunit N; Provisional; Region: PRK05777" /db_xref="CDD:180252" misc_feature 2653851..2654684 /locus_tag="B565_2357" /note="NADH-Ubiquinone/plastoquinone (complex I), various chains; Region: Oxidored_q1; cl14187" /db_xref="CDD:187256" gene 2655184..2656320 /locus_tag="B565_2358" /db_xref="GeneID:10488275" CDS 2655184..2656320 /locus_tag="B565_2358" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393010.1" /db_xref="GI:330830058" /db_xref="GeneID:10488275" /translation="MKQHYVCQFNPTELAATLAPLQGGKLTILLAEQDCAQVPLLQQL CRDFNIALDGAIFPQLIGAQGLLLQGAWLLPRANPYHATLLPLTPQASAASLAQLIAE QVENMLATWPTPSPPPTLFLTFDNLIPNIASILDALYLQLANRVNYAGANAGSGSFTP LACLFDNQRQLAYGVTCTLLPSNSFPFLEHGYQLSAQPMLATSSAANKIAYIDWQPAF QKYQGLISQQFQHTMVREELYRFVVHMPLGLLRANGDVIVRIPVEANDDGALLCAGEV AEHSILTLLKAPESATEHACSLARRLNQQQTLTRAHLLAVYYCAGRQLHFDQQTVTEL RTLLTHSGAGDLAGALSLGEIGSVRHGDYPQFHNGAILCNGAVI" misc_feature <2655556..2655831 /locus_tag="B565_2358" /note="FIST N domain; Region: FIST; pfam08495" /db_xref="CDD:149518" misc_feature 2655889..2656257 /locus_tag="B565_2358" /note="FIST C domain; Region: FIST_C; pfam10442" /db_xref="CDD:151019" gene 2656317..2657774 /locus_tag="B565_2359" /db_xref="GeneID:10488276" CDS 2656317..2657774 /locus_tag="B565_2359" /codon_start=1 /transl_table=11 /product="response regulator/sensory box/hdig domain-containing protein" /protein_id="YP_004393011.1" /db_xref="GI:330830059" /db_xref="GeneID:10488276" /translation="MNNDHAMAIVCDLALCIGREVTLDALLTKVLQRFMHHCATPVGA VLQQQREGYKLLKVIGDEQLRQHTGTTLPLPGWVSEEEHCLLQQTLPLPGSRPYQFAY RLKVEGGYLILLLAPQPHQQIVPVCHLFSPVLGNLARAISLCKDSELLALRQQAELKD LKHFNESLLKAIPIPVFYKDIEGRFLGCNQAFNQVIGLGKEALLGRRVEELLPVGLAE AYSMREAELLRSRQPQCIEQQLHDRNGMRYQVICFKDLFYDHQGMVAGIIGTLVDITR LKESERHQRDLLFQTISALASAISHKDRNSAGHELRVRDLALAIGQAMQLRQERLDAL GLAAMVHNIGLLQIPTEIITRPRELRPVEFELIKQHPQAGHDILKQIDFPWPIATIVL QHHENLDGSGYPQGLAGNTISLEARIIRVADSLIAMTSHRPFRRAMPLSDAFAELTRY AGIHYDEKVVNSCIVLWQTGYHFGPPISQLADKAG" misc_feature 2656821..2657153 /locus_tag="B565_2359" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:117025" misc_feature 2656830..2657138 /locus_tag="B565_2359" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature order(2656878..2656880,2656890..2656892,2656908..2656910, 2656947..2656958,2657034..2657036,2657049..2657051) /locus_tag="B565_2359" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature order(2656938..2656940,2656950..2656952,2656974..2656976, 2656983..2656988,2657070..2657072,2657076..2657078) /locus_tag="B565_2359" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature 2657241..2657612 /locus_tag="B565_2359" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature order(2657241..2657243,2657337..2657342,2657583..2657585) /locus_tag="B565_2359" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature 2657340..2657342 /locus_tag="B565_2359" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene 2657776..2659320 /locus_tag="B565_2360" /db_xref="GeneID:10488277" CDS 2657776..2659320 /locus_tag="B565_2360" /codon_start=1 /transl_table=11 /product="sensory box protein" /protein_id="YP_004393012.1" /db_xref="GI:330830060" /db_xref="GeneID:10488277" /translation="MSELLTSCALPHPLTDALPSSALLLTQVMDQLPYRVLLKDTRFS YIAGNRLLAADLALSPEALVGKNDCDFFPPELVQRYREDDARVMREGIHQHIEEPYLK GGEARWLSTTKFPLRDEAGVIVGVGVFFEDITELKWQQEKLQQYSWTQQAISRAHHAL LKPGDEPQLLQDICDAIAVDDRFPLVAVLQGQPELAQPPRIVAQAGSADASEQTLWLN DEALTQAILHQRRLNQVIFHERPHTGRHPLRSRLLIPLPLQEDLAGALIIHSDQPRLF SQEEEQLFIQLTDYLTYGLQARHTQQAYLRSQQEKIFHARQLELALEDALGAIAAVLE QRDPYTAGHQKHVAKLAQAIGRELRLEEKRLRGIYLGAMVHDIGKIQVPAEILTKPER LTPLEFELVKEHPAIGYLVLKDIDFPWPIARMIHQHHEYLDGSGYPQGLKGDEILLEA RILTVADIVESMSSDRPYRAALGIPQAREQIIQMRGHQLDADVVDACLRILDRGDFIP QPLGKP" misc_feature 2657863..2658186 /locus_tag="B565_2360" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:117025" misc_feature 2657881..2658174 /locus_tag="B565_2360" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature order(2657911..2657913,2657929..2657931,2657947..2657949, 2657986..2657997,2658073..2658075,2658085..2658087) /locus_tag="B565_2360" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature order(2657977..2657979,2657989..2657991,2658013..2658015, 2658022..2658027,2658106..2658108,2658112..2658114) /locus_tag="B565_2360" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature 2658787..2659173 /locus_tag="B565_2360" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature order(2658802..2658804,2658898..2658903,2659144..2659146) /locus_tag="B565_2360" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature 2658901..2658903 /locus_tag="B565_2360" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene complement(2659384..2663307) /locus_tag="B565_2361" /db_xref="GeneID:10488278" CDS complement(2659384..2663307) /locus_tag="B565_2361" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase synthetase subunit/phosphoribosylformylglycinamidine synthase glutamine amidotransferase subunit" /protein_id="YP_004393013.1" /db_xref="GI:330830061" /db_xref="GeneID:10488278" /translation="MDILRGAPALSDFRVQKLLQRFAQMRNESGVESGVEIEDVYAEY VHFAELTSPLSPPERATLGQLLRYGPTIPEHTPSGQLFLVTPRPGTISPWSSKATDIA HNCGLKQVKRLERGIAYYLTIKGQGELSAAQRSAIAAVLHDRMMEVVFAEMSEAAALF AHHEPRPFTQVDVLGGGRAALAEANVALGLALADDEIDYLVENFTKLGRNPNDIELYM FAQANSEHCRHKIFNADWTIDGEQQPKSLFKMIKNTFEQTPDHVLSAYKDNAAVMEGS QGGRFFPSPANGEYQYHQEQVDILMKVETHNHPTAISPFPGAATGSGGEIRDEGATGR GAKPKAGLVGFSVSNLRIPGFEQPWEQDFGKPSRIVSAFDIMQEGPLGGAAFNNEFGR PAILGYFRTFEEEVPSHNGVEVRGYHKPIMLAGGIGNIRTEHVQKGDIPVGAALIVLG GPAMNIGLGGGAASSMASGQSAEDLDFASVQRDNPEMERRCQEVIDRCWQLGDDNPIV FIHDVGAGGLSNAMPELANDGERGGRFDLRAIQSDEPGMSPLEIWCNESQERYVLAVA QDKLPLFKALCERERAPYAVIGTATEEKHLTLSDSHFDNQPIDLPLDVLLGKAPKMHR DVVTLPAQGKALQLDGITLSDAAERVLRLPTVAEKSFLITIGDRSVTGLVNRDQMVGP WQIPVADCAVTAATYDSYHGEAMSMGERTPVALLSHAASARMAVAEALTNLAPAHIGS LKRVKLSANWMAAAGHPGEDAGLYEAVKAVGEELCPALGITIPVGKDSMSMKTRWQQD GKEHSVTSPLSLLISAFARVEDVRNTVTPQLRTDLGETDLILVDLGNGKQRLGASALA QVYRQLGDKAPDLDNPVQLKGFFNAIQALVADRKLIAYHDRSDGGLFVTLTEMAFAGH CGLDIQLDRIGGELLPALFNEELGAVIQVRREDKEAVMTLLAGHGLAACSHVLGTVRE GDLITLQRGGQEVYRASRTALRTIWGETSWQMQRLRDNPACADSEHAARQDATDPGLH AKLTYNPSEDVAAPYIARGVSPRLAVLREQGVNSHVEMAAAFDRAGFAAVDVHMSDIL SGRIKLEEFQTLVACGGFSYGDVLGAGEGWAKSILFNDNAREQFQRFFERGDTLSLGV CNGCQMMSNLRDLIPGADLWPRFVRNRSERFEARFSLVEVQESPSAFFAGMAGSVMPI AVSHGEGRVEVRDAAHLSALQTSGLVGLRFVDNRGSVTEQYPANPNGSPDGITAVTTT DGRATIMMPHPERVFRTVANSWHPDNWGEDGAWMRMFRNARVRLG" misc_feature complement(2659387..2663307) /locus_tag="B565_2361" /note="phosphoribosylformylglycinamidine synthase; Provisional; Region: PRK05297" /db_xref="CDD:179999" misc_feature complement(2661478..2662665) /locus_tag="B565_2361" /note="PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat. FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP...; Region: PurL_repeat1; cd02203" /db_xref="CDD:100034" misc_feature complement(order(2662033..2662035,2662045..2662050, 2662114..2662116,2662270..2662272,2662279..2662281, 2662288..2662290,2662324..2662326,2662399..2662401, 2662405..2662416)) /locus_tag="B565_2361" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100034" misc_feature complement(order(2662114..2662122,2662324..2662326, 2662336..2662338)) /locus_tag="B565_2361" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:100034" misc_feature complement(2660398..2661243) /locus_tag="B565_2361" /note="PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat. FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP...; Region: PurL_repeat2; cd02204" /db_xref="CDD:100035" misc_feature complement(order(2660869..2660871,2660881..2660886, 2660950..2660952,2661055..2661057,2661064..2661066, 2661073..2661075,2661112..2661114,2661187..2661189, 2661193..2661204)) /locus_tag="B565_2361" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100035" misc_feature complement(order(2660950..2660958,2661112..2661114, 2661124..2661126)) /locus_tag="B565_2361" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:100035" misc_feature complement(2659399..2660145) /locus_tag="B565_2361" /note="Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase; Region: GATase1_FGAR_AT; cd01740" /db_xref="CDD:153211" misc_feature complement(order(2659483..2659494,2659498..2659500, 2659684..2659689,2659855..2659857,2659867..2659869, 2659978..2659980,2659990..2659995)) /locus_tag="B565_2361" /note="putative active site [active]" /db_xref="CDD:153211" misc_feature complement(order(2659486..2659488,2659492..2659494, 2659867..2659869)) /locus_tag="B565_2361" /note="catalytic triad [active]" /db_xref="CDD:153211" gene 2663490..2664941 /locus_tag="B565_2362" /db_xref="GeneID:10488279" CDS 2663490..2664941 /locus_tag="B565_2362" /codon_start=1 /transl_table=11 /product="membrane-bound lytic murein transglycosylase F" /protein_id="YP_004393014.1" /db_xref="GI:330830062" /db_xref="GeneID:10488279" /translation="MRCIFRLFIGLLLTLTLVGCDFYSPSSQLEQIRQRGEIRVGTIY GPTSYYQRDDLAQGFDYELAQNYADWLGVKLTIIPVDTTDQLVTLLKKGKLDLAAAAI MVTPERRELFRFGPGFYQVSPKLVYRNGKPKPASLNDIKGKLVVAAGSTGEDLLKEMS KENPKLAWSTSDNADVEELLKQVVDGKIDYTVVQDTVLARTQRYYPELTEGLTLAQKQ TVAWAMSKLPDDSLYASVIDFFGQRFMDGAIAKLDEKYFGHVQNFDFVDTRTFLKRAK SLLPKYQPLFQTHAKNIDWRLLAAISYQESHWDPQARSYTGVRGMMMLTEPTAKAMGV NDRLHPEESIKGGSLYLQQMMEKVPDSVPDDEKVWFALTAYNIGYGHMMDARRLTKEL GKNPDAWSDVKEVLPLLQQARWHRKVRYGYARGSEARNYVNNVRQYYQSLLWLDNEQQ KAHQRESLDNDSEPELAERPTAIAEVVNQITMR" misc_feature 2663493..2664911 /locus_tag="B565_2362" /note="membrane-bound lytic transglycosylase F; Provisional; Region: PRK10859" /db_xref="CDD:182785" misc_feature 2663601..2664260 /locus_tag="B565_2362" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature order(2663619..2663621,2663733..2663735,2663811..2663813, 2663940..2663942,2664069..2664071) /locus_tag="B565_2362" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(2664018..2664020,2664030..2664032,2664048..2664050) /locus_tag="B565_2362" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 2664141..2664158 /locus_tag="B565_2362" /note="hinge residues; other site" /db_xref="CDD:29040" misc_feature 2664372..2664809 /locus_tag="B565_2362" /note="Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain. Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic 'goose-type' lysozymes (GEWL). LTs catalyze...; Region: LT_GEWL; cd00254" /db_xref="CDD:29556" misc_feature order(2664402..2664404,2664462..2664464,2664537..2664539, 2664612..2664614) /locus_tag="B565_2362" /note="N-acetyl-D-glucosamine binding site [chemical binding]; other site" /db_xref="CDD:29556" misc_feature 2664402..2664404 /locus_tag="B565_2362" /note="catalytic residue [active]" /db_xref="CDD:29556" gene complement(2665314..2665538) /locus_tag="B565_2363" /db_xref="GeneID:10488280" CDS complement(2665314..2665538) /locus_tag="B565_2363" /codon_start=1 /transl_table=11 /product="Ubiquitin ligase sinat5" /protein_id="YP_004393015.1" /db_xref="GI:330830063" /db_xref="GeneID:10488280" /translation="MEALLCPSCQAELDTRSKEQTCGQCQAPVRVTAICPTCQQELER LKACGAVDYFCNHCNSLISKRSVQFKAALV" misc_feature complement(2665332..2665532) /locus_tag="B565_2363" /note="Protein of unknown function (DUF1407); Region: DUF1407; pfam07191" /db_xref="CDD:148664" gene complement(2665670..2667166) /locus_tag="B565_2364" /db_xref="GeneID:10488281" CDS complement(2665670..2667166) /locus_tag="B565_2364" /codon_start=1 /transl_table=11 /product="GTP-binding protein engA" /protein_id="YP_004393016.1" /db_xref="GI:330830064" /db_xref="GeneID:10488281" /translation="MTPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQ AKLGELEFIVVDTGGIDGTEEGIELKMAEQSLLAIEEADVVLFMVDARAGLTAADQAI AEHLRKAHKKVFLVANKTDGIDGDSAVSEFYGLALGEVYQIAAAHGRGVLSLLELALA PHLETLVDSATDEDAQDEEEEDFDEEALLRMVAAGELDTKEDTKETPFADLPIKFAIV GRPNVGKSTLTNRMLGEDRVIVYDMPGTTRDSVYIPMERDEQKYVVIDTAGVRRRGKV HETVEKFSVIKTLKAIEDANVCLLVIDAQETITDQDLSILGYVLHAGRSVVLVVNKWD GLDQKVKEDVKNELDRRLGFIDFARVHFISALHGSGVGHLFESIQEAYQSATRRTSTA MLTRIMQMAQEDHQPPMVNGRRVKLKYAHAGGYNPPRIVIHGNQLNDLPDSYKRYLIN YFRKSLKIMGSPIRVEFQESVNPFEGKKNTMTLSQERQRKRLLKMKKK" misc_feature complement(2665760..2667160) /locus_tag="B565_2364" /note="GTP-binding protein Der; Reviewed; Region: PRK00093" /db_xref="CDD:178858" misc_feature complement(2666714..2667151) /locus_tag="B565_2364" /note="EngA1 subfamily. This CD represents the first GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that...; Region: EngA1; cd01894" /db_xref="CDD:133294" misc_feature complement(2667119..2667142) /locus_tag="B565_2364" /note="G1 box; other site" /db_xref="CDD:133294" misc_feature complement(order(2666729..2666737,2666804..2666806, 2666810..2666815,2667116..2667127,2667131..2667133)) /locus_tag="B565_2364" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133294" misc_feature complement(order(2667047..2667058,2667068..2667088)) /locus_tag="B565_2364" /note="Switch I region; other site" /db_xref="CDD:133294" misc_feature complement(2667056..2667058) /locus_tag="B565_2364" /note="G2 box; other site" /db_xref="CDD:133294" misc_feature complement(order(2666921..2666926,2666987..2667004)) /locus_tag="B565_2364" /note="Switch II region; other site" /db_xref="CDD:133294" misc_feature complement(2666990..2667001) /locus_tag="B565_2364" /note="G3 box; other site" /db_xref="CDD:133294" misc_feature complement(2666804..2666815) /locus_tag="B565_2364" /note="G4 box; other site" /db_xref="CDD:133294" misc_feature complement(2666729..2666737) /locus_tag="B565_2364" /note="G5 box; other site" /db_xref="CDD:133294" misc_feature complement(2666021..2666533) /locus_tag="B565_2364" /note="EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that...; Region: EngA2; cd01895" /db_xref="CDD:133295" misc_feature complement(2666489..2666512) /locus_tag="B565_2364" /note="G1 box; other site" /db_xref="CDD:133295" misc_feature complement(order(2666069..2666077,2666165..2666167, 2666171..2666176,2666486..2666497,2666501..2666503)) /locus_tag="B565_2364" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133295" misc_feature complement(order(2666417..2666458,2666465..2666467)) /locus_tag="B565_2364" /note="Switch I region; other site" /db_xref="CDD:133295" misc_feature complement(2666426..2666428) /locus_tag="B565_2364" /note="G2 box; other site" /db_xref="CDD:133295" misc_feature complement(2666360..2666371) /locus_tag="B565_2364" /note="G3 box; other site" /db_xref="CDD:133295" misc_feature complement(order(2666282..2666287,2666357..2666362)) /locus_tag="B565_2364" /note="Switch II region; other site" /db_xref="CDD:133295" misc_feature complement(2666165..2666176) /locus_tag="B565_2364" /note="G4 box; other site" /db_xref="CDD:133295" misc_feature complement(2666069..2666077) /locus_tag="B565_2364" /note="G5 box; other site" /db_xref="CDD:133295" gene complement(2667241..2668425) /locus_tag="B565_2365" /db_xref="GeneID:10488282" CDS complement(2667241..2668425) /locus_tag="B565_2365" /codon_start=1 /transl_table=11 /product="WD40 domain-containing protein" /protein_id="YP_004393017.1" /db_xref="GI:330830065" /db_xref="GeneID:10488282" /translation="MRNLFKMVALGAAVSFALQGCSLFSSEEDLNPMAPLPKVESAFT ADTAWSSTVGDGIGDFYSQLKPVVEEDRIYAAARDGDVSAFDRASGDRLWTVDLADLP VNADKRSARLSGGLVSRYGKLFLGSENGVVYALNEENGEVLWQTNVPGEVVASPAVED GRVVVLTTSGRLIALDTDEGKMQWSLSEEQPPLTLRSAGAPVITNGAVIYGRADGKVG IALLSNGQPVRQSKVADPRGATELDRMVDVDASPLIAGDELYAIAYNGQLMARKLMTG DEVWKRKYSGYRDLAMTGNAIVLTDSRSHLFAIDRRNGLELWSNTQLENRTVTAPVIF GDYVVVGDVEGYLYWLDRTDGTIKAMQQLDSSGLYAAPLVDGETLYVQSRDGKLYALK RP" misc_feature complement(2667244..2668422) /locus_tag="B565_2365" /note="outer membrane biogenesis protein BamB; Provisional; Region: PRK11138" /db_xref="CDD:182989" misc_feature complement(<2667433..2668284) /locus_tag="B565_2365" /note="Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller; Region: PQQ_DH; cl11493" /db_xref="CDD:159495" misc_feature complement(order(2667472..2667474,2667481..2667489, 2667496..2667498,2667502..2667504,2667634..2667636, 2667655..2667663,2667679..2667681,2667685..2667687, 2667874..2667876,2667883..2667891,2667898..2667900, 2667904..2667906,2667994..2667996,2668003..2668011, 2668018..2668020,2668024..2668026,2668144..2668146, 2668153..2668161,2668168..2668170,2668174..2668176, 2668279..2668281)) /locus_tag="B565_2365" /note="Trp docking motif; other site" /db_xref="CDD:73185" misc_feature complement(order(2667520..2667522,2667601..2667603, 2667748..2667750,2667796..2667798,2667922..2667924, 2667967..2667969,2668081..2668083,2668096..2668101, 2668237..2668239)) /locus_tag="B565_2365" /note="active site" /db_xref="CDD:73185" gene complement(2668418..2669068) /locus_tag="B565_2366" /db_xref="GeneID:10488283" CDS complement(2668418..2669068) /locus_tag="B565_2366" /codon_start=1 /transl_table=11 /product="tetratricopeptide repeat family protein" /protein_id="YP_004393018.1" /db_xref="GI:330830066" /db_xref="GeneID:10488283" /translation="MEVYTTEEQQVEVIKEWWKENGTSVIAGTVIGLVGLFGWRYYNQ HQQETMEASSHSYNQVIEQLAKGDAAGFEQAQQFVTANKGDSYGELAALQLAAAAVKA GKLDLAAEQLNLVATTGDESIRPIAALRLARVLNDQGKADEALAKLATIQNEAFKAQV AEARGDVLQKQGKTEEARDAYQAAADAGGLQGSAELKLKMDDLALPAVATGEAPDA" misc_feature complement(2668541..2669029) /locus_tag="B565_2366" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG2976" /db_xref="CDD:32795" misc_feature complement(2668916..2669029) /locus_tag="B565_2366" /note="Uncharacterized protein conserved in bacteria (DUF2133); Region: DUF2133; pfam09976" /db_xref="CDD:192435" gene complement(2669072..2670319) /locus_tag="B565_2367" /db_xref="GeneID:10488284" CDS complement(2669072..2670319) /locus_tag="B565_2367" /codon_start=1 /transl_table=11 /product="histidyl-tRNA synthetase" /protein_id="YP_004393019.1" /db_xref="GI:330830067" /db_xref="GeneID:10488284" /translation="MNDCLPEQSPVWQKVEQILRQVVASYGYSEVRMPIVEQTHLFKR AIGEVTDVVEKEMYTFEDRNGDSLSLRPEGTASCVRAGIEHGLLYNQERRMWYMGPMF RHERPQKGRYRQFHQFGVELFGINGPDIDAELIMLTHRLWRLFGISEHVTLQLNTLGQ SAERAAYRDALVAYLEQYKEQLDEESQRRMYSNPLRVLDSKDEKVQAILAGAPRLFDH LGEESLAHFEGLKRLLESAGIKYEVNERLVRGLDYYNLTVFEWVTSSLGAQGTVCAGG RYDGLVEQLGGQPTPAVGFAMGMERLVLMLETLELNADIRPAVDVYLAMVGEGTEQAG FQLAERLRDALPDLRLMSHCGGGNFKKQLKRADKSGAAIALILGETEVQNGEITIKYL RGQAEQQTVKVDAAIALLAAKGE" misc_feature complement(2669084..2670319) /locus_tag="B565_2367" /note="histidyl-tRNA synthetase; Reviewed; Region: hisS; PRK00037" /db_xref="CDD:178812" misc_feature complement(2669399..2670289) /locus_tag="B565_2367" /note="Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain. HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent...; Region: HisRS-like_core; cd00773" /db_xref="CDD:73226" misc_feature complement(order(2669435..2669440,2669492..2669494, 2669912..2669914,2669921..2669923,2669933..2669935, 2669957..2669959,2669978..2669983,2670065..2670070, 2670077..2670082,2670095..2670097,2670101..2670103, 2670137..2670142,2670212..2670232,2670245..2670247, 2670281..2670283)) /locus_tag="B565_2367" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73226" misc_feature complement(2670212..2670238) /locus_tag="B565_2367" /note="motif 1; other site" /db_xref="CDD:73226" misc_feature complement(order(2669417..2669419,2669426..2669428, 2669435..2669437,2669492..2669494,2669507..2669509, 2669558..2669563,2669567..2669569,2669573..2669575, 2669957..2669959,2669969..2669971,2669975..2669977, 2669984..2669986,2670005..2670007,2670011..2670013, 2670095..2670097,2670101..2670103)) /locus_tag="B565_2367" /note="active site" /db_xref="CDD:73226" misc_feature complement(2670002..2670016) /locus_tag="B565_2367" /note="motif 2; other site" /db_xref="CDD:73226" misc_feature complement(order(2669417..2669419,2669426..2669440)) /locus_tag="B565_2367" /note="motif 3; other site" /db_xref="CDD:73226" misc_feature complement(2669087..2669368) /locus_tag="B565_2367" /note="HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is...; Region: HisRS_anticodon; cd00859" /db_xref="CDD:29799" misc_feature complement(order(2669150..2669152,2669156..2669158, 2669186..2669188,2669210..2669212,2669228..2669230, 2669339..2669344)) /locus_tag="B565_2367" /note="anticodon binding site; other site" /db_xref="CDD:29799" gene complement(2670488..2671603) /locus_tag="B565_2368" /db_xref="GeneID:10488285" CDS complement(2670488..2671603) /locus_tag="B565_2368" /codon_start=1 /transl_table=11 /product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase" /protein_id="YP_004393020.1" /db_xref="GI:330830068" /db_xref="GeneID:10488285" /translation="MSSHESPIIRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAA TIEQIQRIERVGADIVRVSVPTMEAAEAFRLIKLQTRIPIVADIHFDYRIALKVAEYG ADCLRINPGNIGNEQRVRSVVDCARDLNIPIRIGVNGGSLEKDIQEKYGEPTPEALVE SAMRHVDYLDRLDFQDFKVSVKASDVFLAVGAYRLLAKQIEQPLHLGITEAGGFRAGA VKSAIGLGMLLTDGIGDTLRISLAADPVEEVKVGFDILKSLRIRSRGINFIACPSCSR QEFDVIATVNALEERLEDIITPMDVSIIGCVVNGPGEALVSDLGLAGAANKSAFYEGG QRVDRLDNKDLIPTLERRIRARAAMLDPANRIPMDKE" misc_feature complement(2670530..2671591) /locus_tag="B565_2368" /note="4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed; Region: ispG; PRK00366" /db_xref="CDD:178989" misc_feature complement(2670545..2671576) /locus_tag="B565_2368" /note="1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Region: ispG_gcpE; TIGR00612" /db_xref="CDD:188068" gene complement(2671614..2672522) /locus_tag="B565_2369" /db_xref="GeneID:10488286" CDS complement(2671614..2672522) /locus_tag="B565_2369" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393021.1" /db_xref="GI:330830069" /db_xref="GeneID:10488286" /translation="MLRNAREQLGWTREQVASRIHLRLTLIAAIESDTYDKHTSHTFI RGYLRTYAKLVGIPDETILAAYDKLGLTPPDNIDMQSFSRRSRQQANDSRLKVVTWLV ILVLITLSVAWWWQSTSRRSAGDEALAATEMSATGSTPAEPAITPPDAINTAPVEGAA IAPAATDVAAPAVVSDATVTLAPASAAVAPSDVSAAVGTATDAAVSGANGTESEEAVV DPATAPQLKMSFTADCWLDVKDANGKTLFSGLKKANDELVLEGAEPLKFIIGAPMAVK LDYKGQSFDMSRYNNGRTARFSLPQE" misc_feature complement(2671617..2672519) /locus_tag="B565_2369" /note="cytoskeletal protein RodZ; Provisional; Region: PRK10856" /db_xref="CDD:182782" misc_feature complement(2672322..2672519) /locus_tag="B565_2369" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cl09100" /db_xref="CDD:195788" gene complement(2672572..2673294) /locus_tag="B565_2370" /db_xref="GeneID:10488287" CDS complement(2672572..2673294) /locus_tag="B565_2370" /codon_start=1 /transl_table=11 /product="type IV pilus biogenesis/stability protein PilW" /protein_id="YP_004393022.1" /db_xref="GI:330830070" /db_xref="GeneID:10488287" /translation="MTETTYAGQNSTQREVGPDLKAAAQTRLDLGIQYLRQGNAEQAK FNLDRALQYDPSNPQIQIGFAYFYQKVGDFKAAETHYKNALAMDPSNADAMNNYGAFL CDRGRYAEADQAFNQAVIQPGYVKIADTYENAALCALQNRRNDKAGEYYRLALGYNPR NPGLLLDLAELSMKDGKLPDVQSYLARFADVSDENDESLWLRLRLAQAMDKPALLHQF GTELVRQYPTSQQAKRYLANDY" misc_feature complement(2672938..2673213) /locus_tag="B565_2370" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(2672980..2672985,2672992..2672997, 2673004..2673009,2673085..2673090,2673097..2673102, 2673106..2673111,2673196..2673201,2673208..2673213)) /locus_tag="B565_2370" /note="binding surface" /db_xref="CDD:29151" misc_feature complement(order(2672941..2672943,2672950..2672952, 2672962..2672964,2672998..2673000,2673043..2673045, 2673052..2673054,2673064..2673066,2673100..2673102, 2673145..2673147,2673154..2673156,2673166..2673168, 2673202..2673204)) /locus_tag="B565_2370" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature complement(2672734..2673018) /locus_tag="B565_2370" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(2672770..2672775,2672782..2672787, 2672794..2672799,2672875..2672880,2672887..2672892, 2672896..2672901,2672992..2672997,2673004..2673009, 2673013..2673018)) /locus_tag="B565_2370" /note="binding surface" /db_xref="CDD:29151" misc_feature complement(order(2672740..2672742,2672752..2672754, 2672788..2672790,2672833..2672835,2672842..2672844, 2672854..2672856,2672890..2672892,2672941..2672943, 2672950..2672952,2672962..2672964,2672998..2673000)) /locus_tag="B565_2370" /note="TPR motif; other site" /db_xref="CDD:29151" gene complement(2673375..2674478) /locus_tag="B565_2371" /db_xref="GeneID:10488288" CDS complement(2673375..2674478) /locus_tag="B565_2371" /codon_start=1 /transl_table=11 /product="ribosomal RNA large subunit methyltransferase N" /protein_id="YP_004393023.1" /db_xref="GI:330830071" /db_xref="GeneID:10488288" /translation="MSETKINLLDLDRDAMRAFFVELGEKPFRADQVMKWIYHFGCDD FDQMTNVNKVLKERLKAIAEIKAPEISREQRSADGTIKWALQVGDQEVETVYIPEDDR ATLCVSSQVGCALECKFCSTAQQGFNRNLKVSEIIGQVWRAARVVGGKRPITNVVMMG MGEPLLNLANVVPAMRLMMDDYGFGISKRRVTISTSGVVPALDKLGDQIDVALAISLH APNDKLRSEIMPINDKYNIEEFLAGVRRYLAKSNANGGRVTVEYVLLDHINDDMQHAH ELAKVLKDTPSKINLIPFNPFPGNPYGKPSNSRIDRFSKVLMEYGFTVIVRKTRGDDI DAACGQLVGDVIDRTKRTIKNRMQQDGISVKMV" misc_feature complement(2673378..2674478) /locus_tag="B565_2371" /note="ribosomal RNA large subunit methyltransferase N; Provisional; Region: PRK11194" /db_xref="CDD:183031" misc_feature complement(2673558..2674145) /locus_tag="B565_2371" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(2673597..2673602,2673696..2673698, 2673831..2673833,2673891..2673899,2673990..2673995, 2673999..2674001,2674116..2674124,2674128..2674130, 2674134..2674136,2674140..2674142)) /locus_tag="B565_2371" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" gene complement(2674646..2675074) /locus_tag="B565_2372" /db_xref="GeneID:10488289" CDS complement(2674646..2675074) /locus_tag="B565_2372" /codon_start=1 /transl_table=11 /product="nucleoside diphosphate kinase" /protein_id="YP_004393024.1" /db_xref="GI:330830072" /db_xref="GeneID:10488289" /translation="MAIERTFSIVKPDAVSKNLIGAIYSRFESAGLKVVASKMLHMSS EQAAGFYAEHQGKPFYDNLVSFMTSGPVMVQVLEGEDAIRRNREIMGATNPKEALAGT LRACYAESIDRNAVHGSDAPASAAREIAYFFSDNEICPRG" misc_feature complement(2674676..2675065) /locus_tag="B565_2372" /note="Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside...; Region: NDPk_I; cd04413" /db_xref="CDD:58528" misc_feature complement(order(2674691..2674693,2674715..2674720, 2674724..2674726,2674733..2674735,2674763..2674765, 2674796..2674798,2674814..2674816,2674898..2674900, 2674922..2674924,2675042..2675044)) /locus_tag="B565_2372" /note="active site" /db_xref="CDD:58528" misc_feature complement(order(2674958..2674966,2674991..2674993, 2675000..2675002,2675009..2675017,2675030..2675032)) /locus_tag="B565_2372" /note="multimer interface [polypeptide binding]; other site" /db_xref="CDD:58528" gene complement(2675342..2676625) /locus_tag="B565_2373" /db_xref="GeneID:10488290" CDS complement(2675342..2676625) /locus_tag="B565_2373" /codon_start=1 /transl_table=11 /product="peptidase B" /protein_id="YP_004393025.1" /db_xref="GI:330830073" /db_xref="GeneID:10488290" /translation="MNVWLSREFAPAEWGEGALLSHRADGMVIHLVTANPLLDIQQAA RRLCQQGIQKVTLAGHWEREQQWAFAQGLQTPKAEVQLQWAMSSEEDREELEARWLCG RWVREMTNATPEQLGPLELAVEAASFITELAPDKVSHRILKDEALQQAGWVGLYQVGR GSAREPVLLELDFNPGRDPKAPVAAALVGKGITFDSGGYSMKSSEGMLTMKCDMGGAA IVTGALALAMLRGLDKRVKLILCCAENLVSGHAYKLGDILTYKNGTTVEIVNTDAEGR LVLADGLQLASESGAPLIIDAATLTGAAVMALGGRYNALFGLDKGLVSRAMTYADAEH EPAWPLPLEPWHRQQCPSHYADTANSRPVKGGGPGGASNAAGFLSRFVANEGMGWLHI DLAACFSDNGDALWAPGANTLGMRTIARALLAEAK" misc_feature complement(2675351..2676625) /locus_tag="B565_2373" /note="aminopeptidase B; Provisional; Region: PRK05015" /db_xref="CDD:179915" misc_feature complement(2676398..2676625) /locus_tag="B565_2373" /note="Peptidase; Region: DUF3663; pfam12404" /db_xref="CDD:152839" misc_feature complement(2675360..2676499) /locus_tag="B565_2373" /note="Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein...; Region: Peptidase_M17; cd00433" /db_xref="CDD:48344" misc_feature complement(order(2675402..2675404,2675510..2675512, 2675516..2675521,2675558..2675560,2675564..2675566, 2675579..2675584,2675588..2675590,2675603..2675605, 2675609..2675614,2675690..2675692,2675699..2675713, 2675819..2675821,2675831..2675833,2675837..2675839, 2675855..2675869,2675873..2675875,2675879..2675890, 2675894..2675896,2675990..2675995,2676002..2676004, 2676011..2676013,2676026..2676028,2676044..2676046, 2676137..2676139,2676143..2676145,2676284..2676292, 2676296..2676298)) /locus_tag="B565_2373" /note="interface (dimer of trimers) [polypeptide binding]; other site" /db_xref="CDD:48344" misc_feature complement(order(2675726..2675728,2675798..2675800, 2675804..2675806,2675810..2675812,2675987..2675989, 2676020..2676022,2676041..2676043,2676056..2676058)) /locus_tag="B565_2373" /note="Substrate-binding/catalytic site; other site" /db_xref="CDD:48344" misc_feature complement(order(2675804..2675806,2675810..2675812, 2675987..2675989,2676041..2676043,2676056..2676058)) /locus_tag="B565_2373" /note="Zn-binding sites [ion binding]; other site" /db_xref="CDD:48344" gene complement(2676622..2677926) /locus_tag="B565_2374" /db_xref="GeneID:10488291" CDS complement(2676622..2677926) /locus_tag="B565_2374" /codon_start=1 /transl_table=11 /product="aminopeptidase B" /protein_id="YP_004393026.1" /db_xref="GI:330830074" /db_xref="GeneID:10488291" /translation="MADMMKVALSTQAAAAYWGEGAQLSFNGDEALIHLGAAGQEKDV LRTVQRAARRLESSGIKRVTLVGEGWDLERRYAFAQGFYAAKGSRELDFGQQSDAEAR ELDALLKAARWVRDITNGCPEEIYPMSLAESALLLIRGLAGDQVTARITAGEALRESG HIGIWSVGRGSEREPVLLELDYNPTGDRNAPVVAALVGKGITFDSGGYSMKSSDNMLP MKSDMGGAAMVTGALALAISRGLNQRVKLILCCAENLVSGHAFKLGDILTYKNGVSVE IQNTDAEGRLVLADGLMAASDSGAAYILDAATLTGAAKMALGRDYNAVFALDETEQQR ALAAAKVENEQAWALPLEPWHASQLTSAFADLGNVASAEGTAGATTAAAFLSRFVRDE GKGWVHLDLAASYQKSGNDLWATGAKGHGLRTIARWLQEVTA" misc_feature complement(2676634..2677914) /locus_tag="B565_2374" /note="aminopeptidase B; Provisional; Region: PRK05015" /db_xref="CDD:179915" misc_feature complement(2676640..2677836) /locus_tag="B565_2374" /note="Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein...; Region: Peptidase_M17; cd00433" /db_xref="CDD:48344" misc_feature complement(order(2676682..2676684,2676790..2676792, 2676796..2676801,2676832..2676834,2676838..2676840, 2676853..2676858,2676862..2676864,2676877..2676879, 2676883..2676888,2676964..2676966,2676973..2676987, 2677093..2677095,2677105..2677107,2677111..2677113, 2677129..2677143,2677147..2677149,2677153..2677164, 2677168..2677170,2677264..2677269,2677276..2677278, 2677285..2677287,2677300..2677302,2677318..2677320, 2677411..2677413,2677417..2677419,2677558..2677566, 2677570..2677572,2677801..2677803)) /locus_tag="B565_2374" /note="interface (dimer of trimers) [polypeptide binding]; other site" /db_xref="CDD:48344" misc_feature complement(order(2677000..2677002,2677072..2677074, 2677078..2677080,2677084..2677086,2677261..2677263, 2677294..2677296,2677315..2677317,2677330..2677332)) /locus_tag="B565_2374" /note="Substrate-binding/catalytic site; other site" /db_xref="CDD:48344" misc_feature complement(order(2677078..2677080,2677084..2677086, 2677261..2677263,2677315..2677317,2677330..2677332)) /locus_tag="B565_2374" /note="Zn-binding sites [ion binding]; other site" /db_xref="CDD:48344" gene complement(2678100..2678438) /locus_tag="B565_2375" /db_xref="GeneID:10488292" CDS complement(2678100..2678438) /locus_tag="B565_2375" /codon_start=1 /transl_table=11 /product="ferredoxin" /protein_id="YP_004393027.1" /db_xref="GI:330830075" /db_xref="GeneID:10488292" /translation="MPKLIILPHPVLCPDGAALEGQSGETILDVALRNGIEIEHACEK SCACTTCHCVVREGFDSLEPSDELEDDMLDKAWGLEPESRLSCQAKLADEDLVVELPK YTLNLASERH" misc_feature complement(2678142..2678399) /locus_tag="B565_2375" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature complement(order(2678178..2678183,2678286..2678297, 2678304..2678306,2678313..2678315,2678322..2678327)) /locus_tag="B565_2375" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature complement(order(2678178..2678180,2678286..2678288, 2678295..2678297,2678313..2678315)) /locus_tag="B565_2375" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" gene complement(2678440..2680287) /locus_tag="B565_2376" /db_xref="GeneID:10488293" CDS complement(2678440..2680287) /locus_tag="B565_2376" /codon_start=1 /transl_table=11 /product="chaperone protein hscA" /protein_id="YP_004393028.1" /db_xref="GI:330830076" /db_xref="GeneID:10488293" /translation="MALLQIAEPGQSAVPHQHKRAVGIDLGTTNSLVAAVRSGHADTL CDEQGRDLLPSVVHYQSDAIRVGIDAKREAALDPHNTIVSVKRMMGKALADIDTRQQP YQFVAADNGMPQLQTRQGLVNPVQVSAEILKKLAERGAQTLGGDLDGVVITVPAYFDD AQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRL HRGVFEVMATGGDSALGGDDFDHLLADWIKEQAGLSGELDAHLQRELLDVAAAVKHGL TDAEQVACTFAGWQGSVSRSQFDELITPLVKRTLLACRRALRDAGLEQVEVLEVVMVG GSTRVPLVRELVGEFFQRTPLTSIDPDKVVAIGAAIQADILVGNKPDAEMLLLDVIPL SLGLETMGGLAEKVIPRNTTIPVARAQEFTTFKDGQTAMAIHVVQGERELVADCRSLA RFTLTGIPPMAAGAAHIRVTFQVDADGLLSVSAMEKSSGVQAEIQVKPSYGLAEQDIL NMLSASIENAQQDMDARMLAEQQVEADRVVESLNAALAADGDALLNAAERAEIDAAIA HLLTMRNSGATHQIKEAIEAADAVSGEFAARRMDASIRKVLTGQNVNKV" misc_feature complement(2678443..2680287) /locus_tag="B565_2376" /note="chaperone protein HscA; Provisional; Region: hscA; PRK05183" /db_xref="CDD:179957" gene complement(2680316..2680834) /locus_tag="B565_2377" /db_xref="GeneID:10488294" CDS complement(2680316..2680834) /locus_tag="B565_2377" /codon_start=1 /transl_table=11 /product="Co-chaperone protein hscB" /protein_id="YP_004393029.1" /db_xref="GI:330830077" /db_xref="GeneID:10488294" /translation="MNHFELFGLVEGFELDTRQLADTYRQLQTQFHPDRFATAPEREQ LAAVQRAAQINEAFTTLKAPLRRAEYLLSLRGTDIRGEQQTLQDTAFLMQQLEWRERL ADLKDDADPERAIKDFRSEIRHDHQMLMQQLTESLAAGRDLVAADCVRKLKFVDKLLE ELERFEDSLLES" misc_feature complement(2680322..2680834) /locus_tag="B565_2377" /note="co-chaperone HscB; Provisional; Region: hscB; PRK05014" /db_xref="CDD:179914" misc_feature complement(2680622..2680831) /locus_tag="B565_2377" /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of...; Region: DnaJ; cl02542" /db_xref="CDD:194350" misc_feature complement(2680343..2680579) /locus_tag="B565_2377" /note="HSCB C-terminal oligomerisation domain; Region: HSCB_C; pfam07743" /db_xref="CDD:191838" gene complement(2680953..2681276) /locus_tag="B565_2378" /db_xref="GeneID:10488295" CDS complement(2680953..2681276) /locus_tag="B565_2378" /codon_start=1 /transl_table=11 /product="HesB-like protein" /protein_id="YP_004393030.1" /db_xref="GI:330830078" /db_xref="GeneID:10488295" /translation="MAITMTDAAAARVSSFLANRGKGIGLRLGVKTTGCSGLAYVLEF VDELTDEDQVFEQQGVKIIVDAKSLIHLDGTELDFVKEGLNEGFQFNNPNAKGECGCG ESFSV" misc_feature complement(2680956..2681270) /locus_tag="B565_2378" /note="Iron-sulphur cluster biosynthesis; Region: Fe-S_biosyn; cl00400" /db_xref="CDD:189093" gene complement(2681292..2681675) /locus_tag="B565_2379" /db_xref="GeneID:10488296" CDS complement(2681292..2681675) /locus_tag="B565_2379" /codon_start=1 /transl_table=11 /product="NifU-like protein" /protein_id="YP_004393031.1" /db_xref="GI:330830079" /db_xref="GeneID:10488296" /translation="MAYSEKVIDHYENPRNVGGFDKNDPSVATGMVGAPACGDVMKLQ LKISDEGIIEDAKFKTYGCGSAIASSSLVTEWVKGKTLDEAAGIKNTDIAEELALPPV KIHCSILAEDAIKAAIADYKQKKGL" misc_feature complement(2681325..2681669) /locus_tag="B565_2379" /note="Iron-sulfur cluster scaffold-like proteins; Region: IscU_like; cd06664" /db_xref="CDD:143480" misc_feature complement(order(2681358..2681363,2681367..2681372, 2681481..2681483,2681487..2681489,2681562..2681567, 2681649..2681654,2681661..2681669)) /locus_tag="B565_2379" /note="trimerization site [polypeptide binding]; other site" /db_xref="CDD:143480" misc_feature complement(order(2681358..2681360,2681487..2681489, 2681565..2681567)) /locus_tag="B565_2379" /note="active site" /db_xref="CDD:143480" gene complement(2681717..2682931) /locus_tag="B565_2380" /db_xref="GeneID:10488297" CDS complement(2681717..2682931) /locus_tag="B565_2380" /codon_start=1 /transl_table=11 /product="aminotransferase NifS" /protein_id="YP_004393032.1" /db_xref="GI:330830080" /db_xref="GeneID:10488297" /translation="MKLPIYLDYSATCPVDPRVAEKMMQCLTMDGLFGNPASRSHRFG WQAEEAVDLARNQVADLIGADPREIVFTSGATESNNLAIKGVAHFYASKGKHIITSKT EHKAVLDTCRQLEREGFEVTYLEPMPNGLFTIEMIENAMRDDTILVSIMHVNNEIGVV QNIAAIGELCRSRKILLHVDAVQSVGKIPVDVEALKVDLLSVSAHKVYGPKGIGALFV RRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMVSEGERILALRQR LWNGIKDIEAVYINGDLEQRVPGNLNVSFAYVEGESLIMALKDLAVSSGSACTSASLE PSYVLRALGLNDELAHSSIRFSMGRFTTEEEIDYAVKLIRDSIGRLREMSPLWEMYKD GVDLNTVEWAHH" misc_feature complement(2681795..2682928) /locus_tag="B565_2380" /note="Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]; Region: csdA; COG0520" /db_xref="CDD:30866" misc_feature complement(2681831..2682919) /locus_tag="B565_2380" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl00321" /db_xref="CDD:193768" misc_feature complement(order(2682314..2682316,2682323..2682325, 2682383..2682385,2682392..2682394,2682476..2682478, 2682695..2682697,2682704..2682709)) /locus_tag="B565_2380" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99742" misc_feature complement(2682314..2682316) /locus_tag="B565_2380" /note="catalytic residue [active]" /db_xref="CDD:99742" gene complement(2682985..2683449) /locus_tag="B565_2381" /db_xref="GeneID:10488298" CDS complement(2682985..2683449) /locus_tag="B565_2381" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster assembly transcription factor IscR" /protein_id="YP_004393033.1" /db_xref="GI:330830081" /db_xref="GeneID:10488298" /translation="MLDVALHAEQGPVPLADISERQGISLSYLEQLFARLRKHGLVSS VRGPGGGYRLGLAPGEISVGQVITAVDESVDATKCLGKGGCHGGTQCLTHSLWRDLSE RISSFLGDITLAELVRQADVRRIAGKQDEQMKTVLSLVDRAEHGDVSLKVQL" misc_feature complement(2683060..2683449) /locus_tag="B565_2381" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene complement(2683581..2684231) /locus_tag="B565_2382" /db_xref="GeneID:10488299" CDS complement(2683581..2684231) /locus_tag="B565_2382" /codon_start=1 /transl_table=11 /product="TrmH family RNA methyltransferase" /protein_id="YP_004393034.1" /db_xref="GI:330830082" /db_xref="GeneID:10488299" /translation="MKTMGLTQLVLVDPQALPDDNAFALAAGASDVLANARIVPTLDD AIADCGLVIGTSARSRTLSWPMLDPREAGEKSVVEGMQHPVALVFGRERTGLTNDELQ KCHYHVAIPANPDYSSLNLAMAVQTLCYEVRMRWLQGQAAEPEDEMVYPSAAQLEGFY QHLEQTLMKTGFIADDHPGHVMSKLRRLFNRARPEAAELNILRGILTSVQKAHVPD" misc_feature complement(2683842..2684231) /locus_tag="B565_2382" /note="SpoU rRNA Methylase family; Region: SpoU_methylase; cl00362" /db_xref="CDD:193788" gene 2684492..2684908 /locus_tag="B565_2383" /db_xref="GeneID:10488300" CDS 2684492..2684908 /locus_tag="B565_2383" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393035.1" /db_xref="GI:330830083" /db_xref="GeneID:10488300" /translation="MLPPFIYERLPSLYLLAAIAIITLSEQPLLWFAGALLFIAGAVT WMMRSSYRRTDLIIFPSKRWLQPEWLYEAQPFIWLAAGLAMSQLPAPAALIALVPCLW ACRCLWARHHYRRHAHGVIVHLRRDPARRRLHRSLR" gene complement(2684861..2685394) /locus_tag="B565_2384" /db_xref="GeneID:10488301" CDS complement(2684861..2685394) /locus_tag="B565_2384" /codon_start=1 /transl_table=11 /product="lipid carrier protein" /protein_id="YP_004393036.1" /db_xref="GI:330830084" /db_xref="GeneID:10488301" /translation="MFQQLQRRLVEQAPRFLRHPLKLVPFNLQKQLMESLLARVFKEA IEDGDFEFLADKWLKVEVSDLELCWFISEQNGQLVVARECDKADVCFSGTANDLILIA GRKEDPDSLFFQRKLKIEGDTELGLEVKNLMDSLDLDGLPSLMKYPLMDLATFIERAR TESTQAPVQTAPGGIPS" misc_feature complement(2684873..2685379) /locus_tag="B565_2384" /note="SCP-2 sterol transfer family; Region: SCP2; cl01225" /db_xref="CDD:194071" gene 2685584..2686579 /locus_tag="B565_2385" /db_xref="GeneID:10488302" CDS 2685584..2686579 /locus_tag="B565_2385" /codon_start=1 /transl_table=11 /product="peptidase" /protein_id="YP_004393037.1" /db_xref="GI:330830085" /db_xref="GeneID:10488302" /translation="MELLCPAGSLPALKTAVDNGADAVYIGFKDDTNARHFAGLNFTD SKLEKAVDYVHQHGRKLHIAINTFAHPGADARWKQAVDRGVALGADALIIADLAVLEY ASRHYPEMELHVSVQASATNAAGIRFYQQQFNVTRVVLPRVLSMHQVKQLARETDVGL EVFAFGSLCIMAEGRCYLSSYMTGESPNTVGACSPAKFVRWEETPNGLESRLNEVLID RYGPSENAGYPTLCKGRFDVDGQTYHALEEPTSLNTLGLLPELFKTGIQSVKIEGRQR SPAYVEQVTRVWRAAIDAYQANPEAYQVKAEWDAQLARVSEGSQTTLGAYHRQWQ" misc_feature 2685884..2686576 /locus_tag="B565_2385" /note="Peptidase family U32; Region: Peptidase_U32; cl03113" /db_xref="CDD:194534" gene 2686591..2687463 /locus_tag="B565_2386" /db_xref="GeneID:10488303" CDS 2686591..2687463 /locus_tag="B565_2386" /codon_start=1 /transl_table=11 /product="peptidase U32" /protein_id="YP_004393038.1" /db_xref="GI:330830086" /db_xref="GeneID:10488303" /translation="MQFSLGPLLFYWPKADTESFYHAAADSQADIIYLGETVCSKRRE LKVDDWIALARQVASSGKQVVLSTLALISAPSELKEVKRLVDNGDLMVEANDLGTVQL AWEAGIPFVCGPAINAYNADVLRMLLKQGMKRWVMPVELSRDWLIQLNQDLGPLRDQF EVEVFAYGHLPLAYSARCFTARSLDKPKDNCELACINYPTGRLANSREGQRVFNLNGI QTQSGYCYNLGNELAGMEGLVDVVRLSPQGMETLEMLARFKANRQGQAPLSLQQGSDC NGYWRQIPGMSLVE" misc_feature 2686591..2687460 /locus_tag="B565_2386" /note="Peptidase family U32; Region: Peptidase_U32; cl03113" /db_xref="CDD:194534" gene complement(2687529..2688419) /locus_tag="B565_2387" /db_xref="GeneID:10488304" CDS complement(2687529..2688419) /locus_tag="B565_2387" /codon_start=1 /transl_table=11 /product="lipoprotein NlpI" /protein_id="YP_004393039.1" /db_xref="GI:330830087" /db_xref="GeneID:10488304" /translation="MWGCSSSSQVNTPKVPKPQPASLVLATPLQVSYQSELALARLGQ MLSEMELTTEQRAELFYERAVVFDRVGLRSLARLDFNRALREKPDFAEAYNFIGVYLV QQQNYDEAYDAFDSALELAPDYDYAYLNRGIALYYGNRPELAAADMKRFYEAQPEDPY RVIWLYLAEQKLDPSAAMSRMRERLNKYDDDAWNWDLVRLYTGEINASQLMGNVVKGV KDNRELAERLCETYFYLGKFELGKGNRKEAISYFKLALSNNVYDFIEHRYALLELELM ARKPLPPGAQSARNKGDQPS" misc_feature complement(2687562..2688419) /locus_tag="B565_2387" /note="lipoprotein NlpI; Provisional; Region: PRK11189" /db_xref="CDD:183026" misc_feature complement(2687949..2688248) /locus_tag="B565_2387" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(2688006..2688011,2688018..2688023, 2688030..2688035,2688111..2688116,2688123..2688128, 2688132..2688137,2688222..2688227,2688234..2688239, 2688243..2688248)) /locus_tag="B565_2387" /note="binding surface" /db_xref="CDD:29151" misc_feature complement(order(2687967..2687969,2687976..2687978, 2687988..2687990,2688024..2688026,2688069..2688071, 2688078..2688080,2688090..2688092,2688126..2688128, 2688171..2688173,2688180..2688182,2688192..2688194, 2688228..2688230)) /locus_tag="B565_2387" /note="TPR motif; other site" /db_xref="CDD:29151" gene complement(2688564..2688932) /locus_tag="B565_2388" /db_xref="GeneID:10488305" CDS complement(2688564..2688932) /locus_tag="B565_2388" /codon_start=1 /transl_table=11 /product="Rhodanese domain-containing protein" /protein_id="YP_004393040.1" /db_xref="GI:330830088" /db_xref="GeneID:10488305" /translation="MHHNPRFLALVDGIRSRITETDVHQIKRWQDEGRTFHLIDVREE SEWARGHLPGARYLGRGVIERDIETQFPDLETELYLYCGGGFRSILAADNLQQMGYRK VISVDGGFRGWCDAGYPVES" misc_feature complement(2688594..2688839) /locus_tag="B565_2388" /note="Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins...; Region: RHOD; cd00158" /db_xref="CDD:29073" misc_feature complement(2688687..2688689) /locus_tag="B565_2388" /note="active site residue [active]" /db_xref="CDD:29073" gene complement(2689017..2689964) /locus_tag="B565_2389" /db_xref="GeneID:10488306" CDS complement(2689017..2689964) /locus_tag="B565_2389" /codon_start=1 /transl_table=11 /product="protein-export membrane protein SecF" /protein_id="YP_004393041.1" /db_xref="GI:330830089" /db_xref="GeneID:10488306" /translation="MFQILHFEKPIPFMRYAKPGVVFSSVLMVVALFFLFDRGLNWGL DFTGGTTIEVGFQQSVSLDKIHDALEEQKIEGATLQHFGSSRDVLFRLTPKEGVKVEQ QGNEVLAAAKQLDEGAVLKRVEFVGPSVGDELATDGALAMLASILCILAYVAVRFEWR LALGGILSLVHDVVITLGVFAYFQYEFDLTVLAALMTLVGYSLNDTIVVFDRLRENFR KVRKGDTEYILDLSMTETLSRTIITSGLTFIVVLALLLKGGALIHGFAVAMVIGVAFG TYSSIYVASAFAMFLGVKREHMLPTQVEKEGADQQEILP" misc_feature complement(2689071..2689943) /locus_tag="B565_2389" /note="preprotein translocase subunit SecF; Reviewed; Region: secF; PRK13022" /db_xref="CDD:183847" misc_feature complement(2689779..2689865) /locus_tag="B565_2389" /note="SecD/SecF GG Motif; Region: Sec_GG; pfam07549" /db_xref="CDD:116168" misc_feature complement(2689083..2689646) /locus_tag="B565_2389" /note="Protein export membrane protein; Region: SecD_SecF; cl14618" /db_xref="CDD:176628" gene complement(2689975..2691828) /locus_tag="B565_2390" /db_xref="GeneID:10488307" CDS complement(2689975..2691828) /locus_tag="B565_2390" /codon_start=1 /transl_table=11 /product="protein-export membrane protein SecD" /protein_id="YP_004393042.1" /db_xref="GI:330830090" /db_xref="GeneID:10488307" /translation="MLNRYPLWKYLMVILVIAIGFLYAAPNLYGEDPALQVSASRGAE VKLDTLDLVKETLEAAKIPVKHAAFEHGFILIRFKNTEDQLKARDIVANKLGDNFITA LNLAPSTPAWLEAIGAAPLKLGLDLRGGVHFLMEVDMAEALTKQQEQMVQDFRSELRT QKIRYSGVRRVGDQVQVIFRDEADQERAVSHLRRQNPDLTFTTEQKGDEFILLAGLSE AKIKEVKKYALEQNITIIRNRVNELGVAEPLVQQQGAERIVVELPGIQDTARAKEILG ATATLEFHMVDETADIQAAADGRVPPSSKVYNDRNGRPVVLQKRVILTGDHIVGAQSG FDEYSRPQVNIKLDGQGGNKMANFTKDNVGKGMATVFIEYKPVGQPGPDGKRKFRKQE EVINVATIQSRLGSQFRITGIDNANEAHNLALLLRAGALIAPIQIVEERTIGPSLGQQ NIDSGMEAIGWAMLVIVLFMGIYYRAFGWVANLALCMNLVLIVGIMSMIPGATMTLPG IAGIVLTLGMAVDANVLIYERIREEIRNGRGVQQAIHLGFDRAFSTIADSNVTSLITC VILFGIGTGAIKGFALTLGIGLTASMFTAITVSRAIINLAWGGRRIDKLPI" misc_feature complement(2691457..2691828) /locus_tag="B565_2390" /note="EnvZ/OmpR regulon moderator; Provisional; Region: PRK10629" /db_xref="CDD:182599" misc_feature complement(2689978..2691516) /locus_tag="B565_2390" /note="preprotein translocase subunit SecD; Reviewed; Region: secD; PRK05812" /db_xref="CDD:180271" misc_feature complement(2691400..2691471) /locus_tag="B565_2390" /note="SecD/SecF GG Motif; Region: Sec_GG; pfam07549" /db_xref="CDD:116168" misc_feature complement(2690041..2690508) /locus_tag="B565_2390" /note="Protein export membrane protein; Region: SecD_SecF; cl14618" /db_xref="CDD:176628" gene complement(2691847..2692182) /locus_tag="B565_2391" /db_xref="GeneID:10488308" CDS complement(2691847..2692182) /locus_tag="B565_2391" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit YajC" /protein_id="YP_004393043.1" /db_xref="GI:330830091" /db_xref="GeneID:10488308" /translation="MSIISKAYAEGAAPGAQGGGMEMIIMLAVFGLIFYFMIYRPQAK RAKDHRNLMSSLSKGDEVLTSGGLVGKIAKVAADSDYLVIALNDQTQVTIKKDFVSAV LPKGSIQSL" misc_feature complement(2691850..2692122) /locus_tag="B565_2391" /note="Preprotein translocase subunit; Region: YajC; cl00806" /db_xref="CDD:193942" gene complement(2692235..2693371) /locus_tag="B565_2392" /db_xref="GeneID:10488309" CDS complement(2692235..2693371) /locus_tag="B565_2392" /codon_start=1 /transl_table=11 /product="Queuine tRNA-ribosyltransferase" /protein_id="YP_004393044.1" /db_xref="GI:330830092" /db_xref="GeneID:10488309" /translation="MKFELKTTDGRARRGQLVFERGVVQTPAFMPVGTYGTVKGMTPE EVRETGAQILLGNTFHLWLRPGQEVMRAHGDLHDFMNWQGPILTDSGGFQVFSLGHIR KITEAGVHFRHPINGEKIFLDPEKSMEIQYDLGSDIVMIFDECTPYPATYEEARKSME MSLRWGKRSRDKFDALGNKNALFGIIQGSVYEDLRDVSLKGLLEIGFDGYAVGGLAVG EPKEDMHRILEHVCPKIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH LFTTDGVVKIRNAQHRNDTSTLDAECDCYTCKNYSRSYLHHLDKCNEILGARLNTIHN LRYYQRVMQGLRDAIEQGKLDDFVTEFYRRQGKPVPPLAENDVK" misc_feature complement(2692280..2693371) /locus_tag="B565_2392" /note="Queuine tRNA-ribosyltransferase; Region: TGT; cl00409" /db_xref="CDD:193805" gene complement(2693446..2694498) /locus_tag="B565_2393" /db_xref="GeneID:10488310" CDS complement(2693446..2694498) /locus_tag="B565_2393" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine" /protein_id="YP_004393045.1" /db_xref="GI:330830093" /db_xref="GeneID:10488310" /translation="MQVSDFHFDLPDELIARYPMAERTASRLLQLDGQTGALRHGQFV DVLDQLNPGDLLVFNNTRVIPARMFGQKASGGKLEILVERILDEHSVLAHVRASKAPK PGTRMIMDGGVEAEMRARHDALFEIHFLDPRPVLEILEAIGHMPLPPYIDRPDEDADK ERYQTVYNQKPGAVAAPTAGLHFDEPLLEKIRAKGVETAFVTLHVGAGTFQPVRVDKI EDHHMHSEYAEVPQEVVDAIAATRARGGRVIAVGTTSVRSLESAAKVTLAQGKPLAPF FSDTDIFIFPGYQFQIVDAMVTNFHLPESTLIMLVSAFAGYDNVMAAYQAAVAGQYRF FSYGDAMFVTRRQVEA" misc_feature complement(2693467..2694498) /locus_tag="B565_2393" /note="S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional; Region: queA; PRK00147" /db_xref="CDD:178900" misc_feature complement(2693467..2694492) /locus_tag="B565_2393" /note="Queuosine biosynthesis protein; Region: Queuosine_synth; cl00523" /db_xref="CDD:186057" gene 2694711..2695157 /locus_tag="B565_2394" /db_xref="GeneID:10488311" CDS 2694711..2695157 /locus_tag="B565_2394" /codon_start=1 /transl_table=11 /product="CBS domain-containing protein" /protein_id="YP_004393046.1" /db_xref="GI:330830094" /db_xref="GeneID:10488311" /translation="MMTLSEIMTEHPFTLGPSNSVKQAMDLMQQERIRHIPIVDEQHH LLGLVTLTDILATRESKLLLISPEREAEFTDSVQLDEIMTRQVASVDPHAGIKEAALY LQRHRYGCLPVLKGRKLIGIVTESDFIAVAINLLELMEEQEPPTDF" misc_feature 2694723..2695097 /locus_tag="B565_2394" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature 2694741..2695097 /locus_tag="B565_2394" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair; cl10010" /db_xref="CDD:99705" gene 2695847..2696413 /locus_tag="B565_2395" /db_xref="GeneID:10488312" CDS 2695847..2696413 /locus_tag="B565_2395" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase" /protein_id="YP_004393047.1" /db_xref="GI:330830095" /db_xref="GeneID:10488312" /translation="MSTYINTEIKPFNATAYHNGKFVQVSDADLKGKWSVVFFYPADF TFVCPTELGDLADNYAEFQKLGVEIYSVSTDTHFTHKAWHDTSDTIQKIQYPMIGDPT GTITRNFGVMIEEAGLADRGTFVIDPQGIIQIVEINAGGIGRDALELLRKVKAAQYVA SHPGEVCPAKWKEGEATLAPSLDLVGKI" misc_feature 2695859..2696410 /locus_tag="B565_2395" /note="peroxiredoxin; Region: AhpC; TIGR03137" /db_xref="CDD:163149" misc_feature 2695859..2696368 /locus_tag="B565_2395" /note="Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic...; Region: PRX_Typ2cys; cd03015" /db_xref="CDD:48564" misc_feature order(2695859..2695861,2695982..2695987,2695994..2695996, 2696174..2696176,2696204..2696206,2696243..2696251, 2696255..2696263,2696273..2696278,2696297..2696299, 2696345..2696356) /locus_tag="B565_2395" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48564" misc_feature order(2695976..2695978,2696078..2696083,2696147..2696149, 2696153..2696155,2696189..2696191) /locus_tag="B565_2395" /note="decamer (pentamer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:48564" misc_feature order(2695979..2695981,2695988..2695990,2696207..2696209) /locus_tag="B565_2395" /note="catalytic triad [active]" /db_xref="CDD:48564" misc_feature order(2695988..2695990,2696345..2696347) /locus_tag="B565_2395" /note="peroxidatic and resolving cysteines [active]" /db_xref="CDD:48564" gene 2696538..2698118 /locus_tag="B565_2396" /db_xref="GeneID:10488313" CDS 2696538..2698118 /locus_tag="B565_2396" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase subunit F" /protein_id="YP_004393048.1" /db_xref="GI:330830096" /db_xref="GeneID:10488313" /translation="MLDTNLKQQLNTYLQYIVNPIEISVSGNDSDKSAELLALASEIA EMSPKITQTSGTAARKPSMSVAPQGQAPRVHFAGIPMGHEFTSLVLALLQSGGHPSKA DAAVQEQIRNLKGEFHFETYISLSCHNCPDVVQALNLMATLNPGITHTMIDGALFQEE VAERQIMAVPNVYLNGQPFSQGRISLEEIVAKLDTGAAERKAAELNQKAPYDVLVVGG GPAGAAAAIYAARKGIRTAIVAERFGGQVMDTVGIENFISVPYTEGPKLAASLEQHVK EYGVEVITEQRAAAISKDGYVNVDLASGATLKSRAVILATGARWRDLNVPGELEYRTK GVAYCPHCDGPFFKGKRVAVIGGGNSGIEAAIDLAGIVEHVTVVEFADTLRADEVLQK KARSMGNIDIIMSARTTEVIGDGSKVVGMDYEDRTTGEIKHLAVAGIFVQIGLVPNTE FLKGSEIALTRFGEIEIDTKGATSLPGVYAAGDATTVPFKQIIISMGAGATAALGAFD YLIRNPAPEATQADAVTA" misc_feature 2696538..2698085 /locus_tag="B565_2396" /note="alkyl hydroperoxide reductase subunit F; Provisional; Region: PRK15317" /db_xref="CDD:185217" misc_feature 2696538..2696816 /locus_tag="B565_2396" /note="Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) family, N-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which in turn catalyzes the...; Region: AhpF_NTD_N; cd02974" /db_xref="CDD:48523" misc_feature 2696787..2696789 /locus_tag="B565_2396" /note="catalytic residue [active]" /db_xref="CDD:48523" misc_feature 2696847..2697113 /locus_tag="B565_2396" /note="TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then...; Region: AhpF_NTD_C; cd03026" /db_xref="CDD:48575" misc_feature order(2696916..2696918,2696925..2696927) /locus_tag="B565_2396" /note="catalytic residues [active]" /db_xref="CDD:48575" misc_feature 2697588..2697794 /locus_tag="B565_2396" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" gene complement(2698255..2698977) /locus_tag="B565_2397" /db_xref="GeneID:10488314" CDS complement(2698255..2698977) /locus_tag="B565_2397" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393049.1" /db_xref="GI:330830097" /db_xref="GeneID:10488314" /translation="MWRPLLTLSLSALVVSAPLLAIEVPQAPHLVVSGYAEQKTEPDM LTLNVAVSALDKQGLKAKQQVDTKVAAFFSQLEGLGIKRSDVEAGNLMVSPEYQYGEN KKPVLLGYRAQRQLAVKLYQLDKLSPLMDTALKAGLESVSQIEYGLKSPQVIKEQARL NAVEDAKTKAESLAKAFGMKLGKVYSVEYRNASPITAYSRNLKVVQAMAMAAPAADMA DNSYQQQQITVSDNIEAVFLLE" misc_feature complement(2698258..2698911) /locus_tag="B565_2397" /note="Protein of unknown function (DUF541); Region: SIMPL; cl01077" /db_xref="CDD:194028" gene complement(2699033..2699593) /locus_tag="B565_2398" /db_xref="GeneID:10488315" CDS complement(2699033..2699593) /locus_tag="B565_2398" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393050.1" /db_xref="GI:330830098" /db_xref="GeneID:10488315" /translation="MQSFNWVDIDGIRYSWDGQGNITCAGQFGYQASIAGDRLDGMEI ENEAGDVAGSLYVDFATASITYVPVMDTESAYNMILVGHHQGQQEYPLASFHSPLLQD LLGPSDTIPWSAMEEDSGGTNIGQAVQGHVLSWDSFHFDDEVLVCGAAPALDMANQSQ DPGSMVTISLDLTNQILDQLPPLHDI" gene complement(2699680..2704341) /locus_tag="B565_2399" /db_xref="GeneID:10488316" CDS complement(2699680..2704341) /locus_tag="B565_2399" /codon_start=1 /transl_table=11 /product="RTX toxin-like protein" /protein_id="YP_004393051.1" /db_xref="GI:330830099" /db_xref="GeneID:10488316" /translation="MDMRTQIIDKSVVVSAIEGNVEIVLADGSSRPLQKGEILQPGAK LAIADDAKLALSPYDDTPASDVPAGSESAEPAQPQVAASQEGAPSDIAALQESILQGV DPTQNFEASAAGGAPAAGGGGGIGGVAGTSGNGGFVTIDRTGDATIAAAGFDTTYDTA AVINENQAEDLILENQLDDLGETAVTLEDTQVSGNLLDNSTNPDGPADASIVSYDWGI NIGVPAGVAATITGVGILIINPDGSYTFTPAPNYDGAVPPVNYQVTDGQDTVTSTLVI SLTPVDEAVGLDGLTLEGGEVLVSDANLADGSTPNATALTQGGVFTFSAPDGVQTLAI GAIQLISNGTVIALPVSIETPLGNGLQITAITYDPVTGNGSVSYSYTLLDNEAHQQPA SDLQLGESLAVILTDDDGDTTSATLDIVIQDDVPTQDVGVAEEANLGGLSVSLDETVG KEDTYSESDVNDGYVSDDVEGALARATTVIEGGLLSLFTSSGSYGADGAGSITGSFSF VGIGEAGIATNLFATKGGAITLNAVSATELQGVDGDGDVVFSIKIVEVDGVSQLQTTQ FEALSHDDTGLLDESLSLLLSGQNSLGLQYSVTRVDGDGDSVTDSASVSLIAGERSVF SFDDDGPSASAKAAASAGATLDETGGFDAVDITSSAISGLFNTPVYGTDGAGSVQYSL SATAGAGTGLWLAGQSGSASEIKLVAVANGYEGWTGGSTSGTKAFSVLMDGNGKVTVT QYAALEHGVDGSSASDHDDSVSLAAAAAIKVVQTVTDRDGDSTTATSASGLNIAFKDD GPSAVADTITSGTNGTVNLVLVLDSSGSIGDTNMQVIKDAVTNLMNSYGNSLVKVMLV DFAGSATVKSVGSQVWLTKDQATGQLTTISSGGSTDYDDALQAVQDNYGTPPSADNTF VFFISDGVPSSTDDAINTEERNEWTNFLTQKGIDGAYAVGIGSTSVLDADLQSVAWSP SGAHNSNVVVINTAGQLSGTLTNLTQVIDGNVTANDSAGADGFATPKLVSVEYNGTTY TFNNSNTSFSIALGTNKGTLYIENDGDYRFTPPSGGAEGAPVEVTYKIKDGDGDTSSA KLTIINPVLVVGSNANDTGSGASTAIDDHVRPNPLLAPDVDGAIVGGVGADVLIGDVG GVTSGSYNLTFMIDMSGSISGTEFQLMKDAINNLLAKFSGISQLQVEIGTFADNSNVV GTYSSVTAAQQAVSNLTRSGGGTNYQAALTTLNTMMTVDPVADHKYVYFLTDGEPTVG SWTNSTQIANGMAALNALTAPGVVINAVGIGVPSGASFGNNLNAIDNTPDNYLAVDNF DDLSSGLGSLFTAVSVGSDLLQGGAGNDVIFGDSVHADNVDGGWFEFVADNPGKSGGQ LLNELYSQHAVYGKEGAVGGDDTLEGGDGNDVLYGQKGNDILIGGDGIDILIGGTGSD TLTGGAGKDTFKWGAGDVGGTDVIKDFTTGTGGDVLDISELLTGEHANKNSLDAYLTF SSGPGSGKSTLTIDLDGSGGSSTTHVIRFDSIDLTLGGTRNDQTIIEDLLNQGNLKVD P" misc_feature complement(2703061..>2703213) /locus_tag="B565_2399" /note="T1SS-143 repeat domain; Region: T1SS_rpt_143; TIGR03660" /db_xref="CDD:132699" misc_feature complement(2701414..2701899) /locus_tag="B565_2399" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA_subfamily_ECM; cd01450" /db_xref="CDD:29223" misc_feature complement(order(2701489..2701491,2701594..2701596, 2701600..2701602,2701828..2701830,2701891..2701893, 2701897..2701899)) /locus_tag="B565_2399" /note="integrin inhibitor binding pocket; other site" /db_xref="CDD:29223" misc_feature complement(order(2701582..2701584,2701669..2701671, 2701864..2701866,2701870..2701872,2701876..2701878)) /locus_tag="B565_2399" /note="metal ion-dependent adhesion site (MIDAS); other site" /db_xref="CDD:29223" misc_feature complement(order(2701669..2701671,2701858..2701860, 2701864..2701872)) /locus_tag="B565_2399" /note="integrin-collagen binding site; other site" /db_xref="CDD:29223" misc_feature complement(order(2701699..2701704,2701735..2701740, 2701786..2701788)) /locus_tag="B565_2399" /note="putative vWF-collagen binding site; other site" /db_xref="CDD:29223" misc_feature complement(order(2701633..2701638,2701648..2701650, 2701657..2701659,2701750..2701752,2701756..2701761)) /locus_tag="B565_2399" /note="glycoprotein Ib (GpIb) binding site [polypeptide binding]; other site" /db_xref="CDD:29223" misc_feature complement(2700400..2700885) /locus_tag="B565_2399" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cd00198" /db_xref="CDD:29222" misc_feature complement(order(2700574..2700576,2700661..2700663, 2700862..2700864)) /locus_tag="B565_2399" /note="metal ion-dependent adhesion site (MIDAS); other site" /db_xref="CDD:29222" misc_feature complement(2699692..2699970) /locus_tag="B565_2399" /note="Peptidase M10 serralysin C terminal; Region: Peptidase_M10_C; cl12108" /db_xref="CDD:189247" gene complement(2704599..2706524) /locus_tag="B565_2400" /db_xref="GeneID:10488317" CDS complement(2704599..2706524) /locus_tag="B565_2400" /codon_start=1 /transl_table=11 /product="diguanylate cyclase/phosphodiesterase domain 1" /protein_id="YP_004393052.1" /db_xref="GI:330830100" /db_xref="GeneID:10488317" /translation="MTLYRQLLATMLLLFGLLFAATYWVQFNSTRTYLAQQQETTVIN TATSLGLALTPYLENGDKVGAESVIQAIFDGGYYRLVRLDLLASKDVIEQENTNNIQG VPRWFVNLGLFPEVSNESILTSGWLQLGKLKVVGHPGQAYYELWRGMSELASWFLVGF LITTILLMRALNYLLKPLKQICDQAVEIELHHFGHTIPEPKTHELKQVVQAINTLSSK LALQFKEQADEAEKLRERVYVDAVSGLGNRAYFVGQVNAWIAEAGQGGVMLVAVDMLD DIYRDEGFAARDNMVKSIAQALKEQLKGWDGAALARISATEYALLCPTDDLTQLKELA EVINSRIADLVVNPMGEGDALSVIGIAGRDGNDDLSALLTKADNALGKARNERRGAVV MEGGTEQGLMGRLAWRDLVQDAISRQLWRFKAQPACRFDNGARLHAELFASISRDGTD YFAGQFLPAIEQFKLGGEFDQAVLDACVPLLQKQSDLVLAINITAGSLCSDEFLTWLT RYLTEHVELKDRLLFEIPEAAIMKHKDHVAALVGTLQAHGFQWGVDHYGRHFQSLGYL EELSPAYVKVDHGYTSQVMEPGADTSFLAAVCRAAHNAGVTTIATRVEDQHQVELLSK LHIDGYQGFVHPAFPLS" misc_feature complement(<2705625..2706425) /locus_tag="B565_2400" /note="putative inner membrane diguanylate cyclase; Provisional; Region: PRK09966" /db_xref="CDD:182171" misc_feature complement(2705868..2706071) /locus_tag="B565_2400" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(2705349..2705813) /locus_tag="B565_2400" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(2705577..2705579,2705706..2705708)) /locus_tag="B565_2400" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(2705574..2705585,2705589..2705591, 2705661..2705663,2705673..2705675,2705694..2705696)) /locus_tag="B565_2400" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(2705517..2705519,2705601..2705603)) /locus_tag="B565_2400" /note="I-site; other site" /db_xref="CDD:143635" misc_feature complement(2704626..2705294) /locus_tag="B565_2400" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:30163" gene complement(2706528..2707121) /locus_tag="B565_2401" /db_xref="GeneID:10488318" CDS complement(2706528..2707121) /locus_tag="B565_2401" /codon_start=1 /transl_table=11 /product="periplasmic protein" /protein_id="YP_004393053.1" /db_xref="GI:330830101" /db_xref="GeneID:10488318" /translation="MIKRAEQTYGARAGKRVTSWRMLVMETKGRALSEEKKLERVNNF FNRMRFIDDIKLWRKKDYWATPLEFLGAAGGDCEDFSIAKYSTLLELGIPDDKMRMVY VKALDYNQFHMVVAYYETPSSVPVILDNLIGSIRPATQRRDLVPIYSFNGSHLWLMKA RGQGELAGQSSRLGLWNDLRNRMTSGRLARPVVNLDD" misc_feature complement(2706642..>2707112) /locus_tag="B565_2401" /note="Bacterial protein of unknown function (DUF920); Region: DUF920; cl01479" /db_xref="CDD:154425" gene complement(2707416..2708741) /locus_tag="B565_2402" /db_xref="GeneID:10488319" CDS complement(2707416..2708741) /locus_tag="B565_2402" /codon_start=1 /transl_table=11 /product="type I secretion outer membrane protein, TolC" /protein_id="YP_004393054.1" /db_xref="GI:330830102" /db_xref="GeneID:10488319" /translation="MKKTIVAMLVSGCILIPSLGQAQTLEESVAQTLATHPKIKEAFD LYQARLYQHDGAKGGYYPTIDLRGGVGYEKTDSPSTRAASANSNIDDSMTRKEAGLSL RQMLFDGFDISNNVSRTEAEANAQRLAMISEAENTALRVAEVYLNMLRQQEILELSKQ NLETHEQIRSDISKRTDSGLGSTADQTQIEGRVARAYSNQAAAENNYRDAESEFIRVV NEVPKDLVQPVPNTELIPTSLDSALKTATEVHPTLLSSLQDIEAAKYQHEGAKSGFYP NVTFEVDQNWNEDIDAVKGRNDDLTAMVRMRYNLFRGGSDVAESNATSALYSQAKDIH LNAFRQVEEGTRLAWNAKESLAKQKTFLKEHVDASYDTVQAYKKQFGLGQRTLLDVLN TENELFEARRSYITAEYDALLADYRILNATGSLLNAFSVKQPAEWQARQ" misc_feature complement(2707425..2708681) /locus_tag="B565_2402" /note="type I secretion outer membrane protein, TolC family; Region: type_I_sec_TolC; TIGR01844" /db_xref="CDD:162556" misc_feature complement(2708085..2708669) /locus_tag="B565_2402" /note="Outer membrane efflux protein; Region: OEP; pfam02321" /db_xref="CDD:190278" misc_feature complement(2707473..2708027) /locus_tag="B565_2402" /note="Outer membrane efflux protein; Region: OEP; pfam02321" /db_xref="CDD:190278" gene complement(2708779..2710197) /locus_tag="B565_2403" /db_xref="GeneID:10488320" CDS complement(2708779..2710197) /locus_tag="B565_2403" /codon_start=1 /transl_table=11 /product="secretion protein, HlyD family" /protein_id="YP_004393055.1" /db_xref="GI:330830103" /db_xref="GeneID:10488320" /translation="MDWFKRSKKTPSGEVLPAPEHLEFVDDGAAAVLLTTPTGARILL WCCFLFFMSAIVWAAWAELDEVTVGQGKVIPSRQLQVIQNLEGGIVKEIFVKEGDIVE KGQPLLRIDDTRFRSDFREREQEVVTLKGDVARLRAEMASVEVKNDPALGWREQVVVG EAPIQFPDGYETVFAEYAHRERSVQRDRLNNLKNQLYILGQQIEQKEQELIELNAKIR TVNRSVDLARQELNISRPLAKEGIVPQVELIKLERQVNEMQGELESNRLLIPKLNSVL RETISKRNDIALKFRADSQTELNEKQGRLGQLSEGQVGLRDRVDRTSVIAPLKGTIKK LKINTLGGVVQPGMDLMEIVPLEDTLLVEAKVSPKDIAFLRPGLDAIVKITAYDFTIY GGLHGKVEQISADSIQDEEGNSFYLVRVRTEKSYLGDELNALPIIPGMLASADIITGK KSVLDYLLKPILRAKQSALRER" misc_feature complement(2708782..2710089) /locus_tag="B565_2403" /note="type I secretion membrane fusion protein, HlyD family; Region: type_I_hlyD; TIGR01843" /db_xref="CDD:130902" misc_feature complement(2709868..>2709936) /locus_tag="B565_2403" /note="Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2...; Region: Biotinyl_lipoyl_domains; cl11404" /db_xref="CDD:197439" gene complement(2710205..2712349) /locus_tag="B565_2404" /db_xref="GeneID:10488321" CDS complement(2710205..2712349) /locus_tag="B565_2404" /codon_start=1 /transl_table=11 /product="Toxin secretion ATP-binding protein" /protein_id="YP_004393056.1" /db_xref="GI:330830104" /db_xref="GeneID:10488321" /translation="MQAETSRIDELLECLVFLTRFYGVPNSQDALTTGLPLVSGRLTT ALFCRAAERGGLSAREVIQPLADISPLLLPCVLQMRSGGACILLEWNEDRSQGKVIFP QAGDAAQWLTAAQLGDEYLGRLFYVKKQFKFDERSPKVLETRDGHWFWSTLFESRGIY RDVLIASILINLFAIASPLFTMNVYDKIVPNLAFDSLWVLAVGAMVVFTFDFVMRQLR SYFIDIAGKKSDVLLSAKIFAKVMGMRMESRPASTGAFAKHLQEFESVREFFTSATVS TLIDLPFAVFFLFIIWMFAGVMVVVPIVAMLILIAYSFYIQEPLKQSIEEGSRLASQK NANLIESISGLETVKIFGAESMFQHRWEQAVSHISTWGVQTRRITNSMSSLASYIQQV VTVGLVIVGVYQISEGLVTMGGMIAAVMLSSRAIAPMVQLSVLSTRYNQAKSALDILE KIMQTPGEQEEGKQYIHHPVIAGRIEFENVSFKYPGMETSTLHNINLRIQPGEKVAII GRIGAGKTTLEKLLMGLYRPTDGSVRIDGFELDQLPPAVIRRNIGCVPQDVILFFGSV RDNIMLGNPLVDDVRVLRAAKRAGVTNFTNRDPNGLDRQIGEGGRQLSGGQRQSILLA RALLNDPPILVMDEPTSNMDNQSEMQVKQELARLGPETTLILITHKTSMLDVASRVIV IEQGQIVADGPKEVVLQQLKEGKVRVQEVSHG" misc_feature complement(2711966..2712340) /locus_tag="B565_2404" /note="A sub-family of peptidase family C39. Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the 'double-glycine' leader peptides from the precursors of various...; Region: Peptidase_C39_likeD; cd02421" /db_xref="CDD:30274" misc_feature complement(2710235..2712319) /locus_tag="B565_2404" /note="type I secretion system ATPase, LssB family; Region: type_I_sec_LssB; TIGR03375" /db_xref="CDD:163239" misc_feature complement(2711186..2711863) /locus_tag="B565_2404" /note="ABC transporter transmembrane region; Region: ABC_membrane; cl00549" /db_xref="CDD:193863" misc_feature complement(2710274..2710933) /locus_tag="B565_2404" /note="ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two...; Region: ABCC_bacteriocin_exporters; cd03245" /db_xref="CDD:73004" misc_feature complement(2710802..2710825) /locus_tag="B565_2404" /note="Walker A/P-loop; other site" /db_xref="CDD:73004" misc_feature complement(order(2710343..2710345,2710436..2710441, 2710679..2710681,2710799..2710807,2710811..2710816)) /locus_tag="B565_2404" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73004" misc_feature complement(2710679..2710690) /locus_tag="B565_2404" /note="Q-loop/lid; other site" /db_xref="CDD:73004" misc_feature complement(2710484..2710513) /locus_tag="B565_2404" /note="ABC transporter signature motif; other site" /db_xref="CDD:73004" misc_feature complement(2710436..2710453) /locus_tag="B565_2404" /note="Walker B; other site" /db_xref="CDD:73004" misc_feature complement(2710418..2710429) /locus_tag="B565_2404" /note="D-loop; other site" /db_xref="CDD:73004" misc_feature complement(2710337..2710357) /locus_tag="B565_2404" /note="H-loop/switch region; other site" /db_xref="CDD:73004" gene complement(2712727..2713656) /locus_tag="B565_2405" /db_xref="GeneID:10488322" CDS complement(2712727..2713656) /locus_tag="B565_2405" /codon_start=1 /transl_table=11 /product="Radical SAM protein, family" /protein_id="YP_004393057.1" /db_xref="GI:330830105" /db_xref="GeneID:10488322" /translation="MQLHELVNTFGQDLKQRHGQKIHKLSIHGAFTCPNRDGTLGRGG CTFCNVSSFADESAQQLSVVQQLLARRDEVTRAKRYLAYFQAYTSTYAEVEYLQRMYE EALSVSDMVGLCVGTRPDCVPDAVLDLLAGYQARGYEVWLELGLQSANDKTLQRINRG HGYAAYEDAVRRAHQRGIKVCAHLIVGLPGEVPMDSLDTLHRIVETGIEGIKLHPLHV VEGSTLGKAWQAGRLEVLTLEQYVEAAVAMIQHTPPEVVYHRISASARRPTLLAPAWC ENRWTAMADIAKALSLNGPQGHALGRPFILPDL" misc_feature complement(2712751..2713641) /locus_tag="B565_2405" /note="radical SAM protein, TIGR01212 family; Region: TIGR01212" /db_xref="CDD:130279" misc_feature complement(2713048..2713560) /locus_tag="B565_2405" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene 2714268..2718725 /locus_tag="B565_2406" /db_xref="GeneID:10488323" CDS 2714268..2718725 /locus_tag="B565_2406" /codon_start=1 /transl_table=11 /product="glutamate synthase [NADPH] large chain" /protein_id="YP_004393058.1" /db_xref="GI:330830106" /db_xref="GeneID:10488323" /translation="MSLYDPKLERDNCGFGLLAHMEGEASHKLVRLAMSALARMQHRG GISADGKTGDGCGLLLQKPDSFFRAVAEEKGWHLGRNYAVGMLFLNPDPVLAQQTRDI IDEELEKETLSLVGWRKVPVDTNVLGTIAKASLPSIEQVFVNAPPGWVDKDLERRLYI VRRRIEKRVNDDYFYVVSLSNLVTVYKGLCMPVDLPRFYLDLADIRMQAAICVFHQRF STNTSPRWPLAQPFRYLAHNGEINTIAGNRQWAKARSYKFATPLIPDLQEAAPFVNTT GSDSSSLDNMLDLFLAGGMDLFRAMRLLIPPAWQKHPNMDDDLRAFYDFNSMHMEPWD GPAGIVMTDGRYATCALDRNGLRPARYVITKDKFITLASEVGTWDYTPDEVLEKGRVG PGELFVVDTSNGKVWTSFEIDDDLKNRHTYKQWMDKHCRRLVPFEQMDDSQTGSREFS DDQLKTYQKLFGYSFEELDQIIRVLGENGQEAVGSMGDDTPMAVLSSGPRTLYDYFRQ MFAQVTNPPIDPLRENHVMSLATCIGREQNVFNETFGHAHRVLFQSPILLYSDFHQLL ALEGEYYRHQVISLNFKPEEGLEAAIVRICDEAKTAARSGTVLLVLSDRDISADTLPI PAAMAVGAVQRTLVDNNLRCDANILVETASCRDPHHFSVLLGFGATAIYPYLAYETLA KQVEEGVLTMSLRQAMVNYRNGINKGLYKVMSKMGISTVASYRCSQLFEAVGLAKSVV DTCFRGVSSRIQGADYADIQQDQHNLARQAWLVRKPLAHGGLLKFVHGGEYHTYNPDV VQTLQTAVRSGNYADYKEYARLVNERPVATLRDLLALKKVDNPVALDQVEPADKLFPR FDSAAMSIGALGPEAHEALAVAMNRLGGQSNSGEGGEDPKRFGTEKNSRIKQVASGRF GVTPHYLMNADVVQIKVAQGAKPGEGGQLPGDKVTAQIAQLRYSVPGVTLISPPPHHD IYSIEDLAQLIFDIKQINPSCLVSVKLVSEPGVGTIACGVAKAYADFITISGYDGGTG ASPLTSVKYAGSPWELGLAETQQALVANGLRHKVRLQVDGGLKTGLDIIKAAILGAES FGFGTGPMVALGCKYLRICHLNNCATGVATQDEKLRREHFTGLPEMVMNYFKFIAEET RELMAQLGVTQLTDLIGRTDLLEALPGLTARQAKLDLSGILARPVAPAGSSLFSQQHN PTFDKGPLNLKMVEELLEAVETSSGGEFRYDIRNTDRSVGARLSGEIVKRHGNQGMAA DPVKVHFNGTAGQSFGVWNAGGLEMILTGDANDYVGKGMTGGKLVIKPHVGVAFKSHE AAIIGNTCLYGATGGKLYAAGTAGERFAVRNSGALAVVEGIGDNGCEYMTGGIVTVLG QTGVNFAAGMTGGFAYVLDECGNFAKRTNPELVELLDVADLAIHQEHLRGIITAHLNE TGSSRAEEILANFDSYVPKFRLIKPKSSDVKSLLGHTSRSSAELRIQAQ" misc_feature 2714268..2718707 /locus_tag="B565_2406" /note="glutamate synthase subunit alpha; Provisional; Region: gltB; PRK11750" /db_xref="CDD:183297" misc_feature 2714304..2715527 /locus_tag="B565_2406" /note="Glutamine amidotransferases class-II (Gn-AT), glutamate synthase (GltS)-type. GltS is a homodimer that synthesizes L-glutamate from 2-oxoglutarate and L-glutamine, an important step in ammonia assimilation in bacteria, cyanobacteria and plants. The N-...; Region: GltS; cd00713" /db_xref="CDD:48477" misc_feature order(2714304..2714306,2714394..2714396,2714916..2714918, 2714979..2714987,2715102..2715104) /locus_tag="B565_2406" /note="active site" /db_xref="CDD:48477" misc_feature order(2714556..2714558,2714565..2714567,2714577..2714579, 2714616..2714618,2714622..2714624,2714637..2714639, 2714670..2714672,2714682..2714684,2714934..2714936) /locus_tag="B565_2406" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48477" misc_feature 2715627..2716478 /locus_tag="B565_2406" /note="Glutamate synthase central domain; Region: Glu_syn_central; pfam04898" /db_xref="CDD:147192" misc_feature 2716650..2717771 /locus_tag="B565_2406" /note="Glutamate synthase (GltS) FMN-binding domain. GltS is a complex iron-sulfur flavoprotein that catalyzes the reductive synthesis of L-glutamate from 2-oxoglutarate and L-glutamine via intramolecular channelling of ammonia, a reaction in the plant...; Region: GltS_FMN; cd02808" /db_xref="CDD:73370" misc_feature order(2716845..2716856,2716935..2716937,2716989..2716991, 2717055..2717057,2717073..2717075,2717133..2717135, 2717259..2717261,2717349..2717357,2717472..2717474, 2717478..2717480,2717541..2717546,2717568..2717570, 2717586..2717588,2717601..2717603) /locus_tag="B565_2406" /note="active site" /db_xref="CDD:73370" misc_feature order(2716845..2716856,2716935..2716937,2716989..2716991, 2717055..2717057,2717259..2717261,2717349..2717354, 2717472..2717474,2717478..2717480,2717541..2717546) /locus_tag="B565_2406" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73370" misc_feature order(2717073..2717075,2717133..2717135,2717352..2717357) /locus_tag="B565_2406" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73370" misc_feature order(2717568..2717570,2717586..2717588,2717601..2717603) /locus_tag="B565_2406" /note="3Fe-4S cluster binding site [ion binding]; other site" /db_xref="CDD:73370" misc_feature 2717901..2718653 /locus_tag="B565_2406" /note="gltb_C. This domain is found at the C-terminus of the large subunit (gltB) of glutamate synthase (GltS). GltS encodes a complex iron-sulfur flavoprotein that catalyzes the synthesis of L-glutamate from L-glutamine and 2-oxoglutarate. It requires the...; Region: gltB_C; cd00982" /db_xref="CDD:29611" misc_feature order(2718000..2718005,2718012..2718014,2718021..2718026, 2718081..2718083,2718090..2718095,2718105..2718107, 2718141..2718149,2718162..2718164,2718171..2718173, 2718228..2718239,2718246..2718248,2718255..2718257, 2718264..2718266,2718291..2718305,2718312..2718317, 2718321..2718323,2718348..2718359,2718366..2718371, 2718375..2718377,2718414..2718416,2718423..2718425, 2718432..2718434,2718477..2718488) /locus_tag="B565_2406" /note="domain interface; other site" /db_xref="CDD:29611" gene 2718738..2720153 /locus_tag="B565_2407" /db_xref="GeneID:10488324" CDS 2718738..2720153 /locus_tag="B565_2407" /codon_start=1 /transl_table=11 /product="glutamate synthase [NADPH] small chain" /protein_id="YP_004393059.1" /db_xref="GI:330830107" /db_xref="GeneID:10488324" /translation="MSQNVFQFIDVQRVDPPKKPLKIRKIQFVEIYESFNQPQVQMQA DRCLECGNPYCEWKCPVHNYIPNWLKLAKEGRILEAVELSHQTNSLPEVCGRVCPQDR LCEGSCTLNDRFGAVTIGNIEKYITDKAFEMGWKPDLSNVVKTGKRVAVIGAGPAGLA CADVLARNGVTPVVFDKYPEIGGLLTFGIPSFKLEKEVMQRRREIFQGMGVEFRLETE VGKDITFADLLGEFDAVFLGVGTYKYMKGGFANEEAPGVYDALPYLIANANRLLGFEK AQADYIDFAGKQVVVLGGGDTAMDCVRTAIRQGADKVICAYRRDEENMPGSKREVKNA REEGVEFMFNLQPVAVELDANGRTVGIKVVSTELGEPDANGRRNPVVIEGSEQVLAAD AVVMAFGFQPNPQPWMAEFGIELDNRDRIKASEQAEYAFQTSNPKVFAGGDAVRGSDL VVTAIYEGRKAAEGIMDYLAV" misc_feature 2718753..2720150 /locus_tag="B565_2407" /note="glutamate synthase small subunit family protein, proteobacterial; Region: gltD_gamma_fam; TIGR01318" /db_xref="CDD:130385" misc_feature <2718852..>2719136 /locus_tag="B565_2407" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" misc_feature 2719179..>2719325 /locus_tag="B565_2407" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 2719602..2719835 /locus_tag="B565_2407" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" gene complement(2720233..2720811) /locus_tag="B565_2408" /db_xref="GeneID:10488325" CDS complement(2720233..2720811) /locus_tag="B565_2408" /codon_start=1 /transl_table=11 /product="O-methyltransferase" /protein_id="YP_004393060.1" /db_xref="GI:330830108" /db_xref="GeneID:10488325" /translation="MELEQLKRQLEQLGERNDSMQQARHRKLLNITRDTGELLSVLVQ TRGAQAVLEIGTSNGYSTLWLAEAVRRLEGHVTTIELDEDKRVLAHDNFQRAGLAPWV TLLAGDASELLPTLPQAGYQLIFLDSDRQHYRAWWPQIRRLLAPRGLLVVDNAISHRS EMVEWMNEVGQDPAFATSLVPVGKGEWLVVRL" misc_feature complement(2720356..2720661) /locus_tag="B565_2408" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(2720431..2720433,2720485..2720493, 2720569..2720574,2720632..2720652)) /locus_tag="B565_2408" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 2721099..2722394 /locus_tag="B565_2409" /db_xref="GeneID:10488326" CDS 2721099..2722394 /locus_tag="B565_2409" /codon_start=1 /transl_table=11 /product="DEAD box family ATP-dependent RNA helicase" /protein_id="YP_004393061.1" /db_xref="GI:330830109" /db_xref="GeneID:10488326" /translation="MRFESFDFAPEILRAVSDCGYQEMTPVQQQAIPAIRRGRDVLAS AQTGTGKTAAFALPILQRLVDNPAPVQPSNARVLILTPTRELAAQVASNINDFAKYLD ITTITIVGGGKQDVQAKKLKAGAHIIVATPGRLLEHLTACNLSLSGVECLVMDEADRI LDMGFSADVQKILQAVNKTRQNLLFSATFSDAVKKLANLMLDRPQIVSVNKQNSTADT VSHTVYPVEQKRKRELLSELIGKQNWQQVLVFASTRESCDVLVEELNLDGIKSAVVHG EKAQGNRRRALREFMEGKVRVLVATEVAARGLDIPDLEYVVNYDLPFLAEDYVHRIGR TGRAGKRGMAISFVSREEERTLLEIEALIGQKIRRIMVPGYEVSSRDELIKQLQERRR FGKRPQREDNAVAQVMAEAKLQGQRLKRLAAAKKPRQPK" misc_feature 2721099..2722388 /locus_tag="B565_2409" /note="ATP-dependent RNA helicase RhlE; Provisional; Region: PRK10590" /db_xref="CDD:182572" misc_feature 2721105..2721722 /locus_tag="B565_2409" /note="DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (...; Region: DEADc; cd00268" /db_xref="CDD:28928" misc_feature 2721240..2721254 /locus_tag="B565_2409" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28928" misc_feature 2721561..2721572 /locus_tag="B565_2409" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:28928" misc_feature 2721654..2721662 /locus_tag="B565_2409" /note="motif III; other site" /db_xref="CDD:28928" misc_feature 2721753..2722139 /locus_tag="B565_2409" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(2721852..2721863,2721921..2721926,2721999..2722007) /locus_tag="B565_2409" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(2722023..2722025,2722086..2722088,2722098..2722100, 2722107..2722109) /locus_tag="B565_2409" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene 2722412..2723143 /locus_tag="B565_2410" /db_xref="GeneID:10488327" CDS 2722412..2723143 /locus_tag="B565_2410" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393062.1" /db_xref="GI:330830110" /db_xref="GeneID:10488327" /translation="MNRKGATGAFAISVIGVDPWWSTQGLLMTSPTYNQALLEMATQS LAELARTAEQKAGKRTPAQESHFLCTWMADSLKEKRFSRLVMEDLKAWVQLGRTLGAG ADLKGLLERIAFQYQCAMTNPQQLGAKLAALLEELATAGWLVLTESEVNARLRLQSGG QASLVVSHSEYEGHIEDGELVKPLTLYVRGDEKVLAEAAFKHGLLLSQGNKKTTLVKH HKAYRLMPDNAQPALALLSEARQGA" misc_feature 2722505..2723119 /locus_tag="B565_2410" /note="Protein of unknown function (DUF2913); Region: DUF2913; pfam11140" /db_xref="CDD:151584" gene complement(2723238..2723477) /locus_tag="B565_2411" /db_xref="GeneID:10488328" CDS complement(2723238..2723477) /locus_tag="B565_2411" /codon_start=1 /transl_table=11 /product="LuxR family transcriptional regulator" /protein_id="YP_004393063.1" /db_xref="GI:330830111" /db_xref="GeneID:10488328" /translation="MILRELGDYLAAQQKVSRRDLARHFHTSEDAVEAMLGVWMRKGR VIKRESRVCGGSCCGKSEEVMFEWCDAGQIGIKIR" misc_feature complement(2723289..2723474) /locus_tag="B565_2411" /note="FeoC like transcriptional regulator; Region: FeoC; cl07573" /db_xref="CDD:186701" gene complement(2723474..2725747) /locus_tag="B565_2412" /db_xref="GeneID:10488329" CDS complement(2723474..2725747) /locus_tag="B565_2412" /codon_start=1 /transl_table=11 /product="ferrous iron transport protein B" /protein_id="YP_004393064.1" /db_xref="GI:330830112" /db_xref="GeneID:10488329" /translation="MNYSLVTVGNPNSGKTSLFNALTGARQQVGNWSGVTVDKKMGEF SAGEHHFKLMDLPGIYSLASQDGSLDEQIASRFAQGQQPDLLLNVIDAANLERSLYLT LQLRELGLPMVVVLNKLDILQKRRIVIDESKLGKSLGCPVVALSAHNSKQVAAFKQQI RQFIGQPQAALQLDYGHALETDLAELETLLAPHHLTTRGRALRLLEEDAVMQETLLPG QQAAAANVVARAHQGQDIDLQLADIRYGHIHQWVQQARQQKGKLTEAQSEWLDRVLLN RWIGIPFFLFVMYLMFLFAINVGSAFIDFFDIMGGALFVDGVHHLLGLVNAPEWLGAI LADGFGVGLQTVATFIPVIGCLYLFLAVLESSGYLARAAFVVDALMRRLGLPGKAFVP MLMGFGCTVPSVMATRTLNSERERLMTSAMAPFMSCGARLPVYALFAVAFFPESGQNL VFGLYLIGILVAVLTGLLLRSTLLPGKSDSMLMEMPDYEWPRPVNVAIKTWQKLKSFV FGAGKTIVLVVAVLSVLNSLGTDGSFGHQEQESSVLSKISQAVTPVLHPIGVRDDNWQ ATVGIVTGIFAKEAVVGTLNSLYAGGGADEEEESEFSLVASFHEAIDAVAANLAEINP SDPMGLDVGNLDDQKAAAEAQEVDVSTYGNMQTHFDGAAGAFAYLLFVLLYMPCAAAM GALVRETGRQWALMTAVWCNYMAFMCATLFYQVATFAAHPEQSLFWIASYGLSLVLLW WAGRRHGDIVARKVVTL" misc_feature complement(2723477..2725726) /locus_tag="B565_2412" /note="ferrous iron transport protein B; Reviewed; Region: feoB; PRK09554" /db_xref="CDD:181948" misc_feature complement(2725262..2725726) /locus_tag="B565_2412" /note="Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this...; Region: FeoB; cd01879" /db_xref="CDD:133280" misc_feature complement(2725700..2725723) /locus_tag="B565_2412" /note="G1 box; other site" /db_xref="CDD:133280" misc_feature complement(order(2725304..2725312,2725388..2725390, 2725394..2725399,2725697..2725708,2725712..2725714)) /locus_tag="B565_2412" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133280" misc_feature complement(2725631..2725645) /locus_tag="B565_2412" /note="Switch I region; other site" /db_xref="CDD:133280" misc_feature complement(2725640..2725642) /locus_tag="B565_2412" /note="G2 box; other site" /db_xref="CDD:133280" misc_feature complement(2725574..2725585) /locus_tag="B565_2412" /note="G3 box; other site" /db_xref="CDD:133280" misc_feature complement(order(2725499..2725504,2725514..2725546, 2725553..2725576)) /locus_tag="B565_2412" /note="Switch II region; other site" /db_xref="CDD:133280" misc_feature complement(2725388..2725399) /locus_tag="B565_2412" /note="G4 box; other site" /db_xref="CDD:133280" misc_feature complement(2725304..2725312) /locus_tag="B565_2412" /note="G5 box; other site" /db_xref="CDD:133280" misc_feature complement(2724422..2724712) /locus_tag="B565_2412" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" misc_feature complement(2724239..2724397) /locus_tag="B565_2412" /note="Ferrous iron transport protein B C terminus; Region: FeoB_C; pfam07664" /db_xref="CDD:191804" misc_feature complement(<2723981..2724133) /locus_tag="B565_2412" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" gene 2726223..2726552 /locus_tag="B565_2413" /db_xref="GeneID:10488330" CDS 2726223..2726552 /locus_tag="B565_2413" /codon_start=1 /transl_table=11 /product="translation initiation factor, Sui1 family-like protein" /protein_id="YP_004393065.1" /db_xref="GI:330830113" /db_xref="GeneID:10488330" /translation="MSHDNNSRLVYSTDGGMIKEQSAPQSASPFPTDGTVRIRRETKG RKGAGVITIHGVPAEQQKSLATLLKKKCGTGGGIKEGVIEIQGDKRDLIKTELEKAGF SVKLVGG" misc_feature 2726223..2726549 /locus_tag="B565_2413" /note="translation initiation factor Sui1; Validated; Region: PRK06824" /db_xref="CDD:168689" misc_feature 2726232..2726549 /locus_tag="B565_2413" /note="The SUI1/eIF1 (eukaryotic initiation factor 1) fold is found in eukaryotes, archaea, and some bacteria and is thought to play an important role in accurate initiator codon recognition during translation initiation. This fold, which includes two...; Region: SUI1_eIF1; cl00229" /db_xref="CDD:193722" gene 2726812..2727369 /locus_tag="B565_2414" /db_xref="GeneID:10488331" CDS 2726812..2727369 /locus_tag="B565_2414" /codon_start=1 /transl_table=11 /product="integral membrane protein" /protein_id="YP_004393066.1" /db_xref="GI:330830114" /db_xref="GeneID:10488331" /translation="MEALLTSTLSVAIAEIGDKTQLLALLLICRFRKPWPIIAGMLAA TLLNHAGAAWIGEFISRWLDPKIMTWLVAIAFIAMAIWILVPDKMDDEESPLDKYGPF MATFVLFFIAEIGDKTQIATVLLAAKYDSLVQVITGTTLGMMLANVPVVLIGKLGADK LPLKGIRIACAILFVGLGVSTLIFA" misc_feature 2726812..2727366 /locus_tag="B565_2414" /note="Predicted membrane protein [Function unknown]; Region: COG2119" /db_xref="CDD:32302" misc_feature 2726821..2727051 /locus_tag="B565_2414" /note="Uncharacterized protein family UPF0016; Region: UPF0016; pfam01169" /db_xref="CDD:189869" misc_feature 2727115..2727345 /locus_tag="B565_2414" /note="Uncharacterized protein family UPF0016; Region: UPF0016; pfam01169" /db_xref="CDD:189869" gene 2727534..2728472 /locus_tag="B565_2415" /db_xref="GeneID:10488332" CDS 2727534..2728472 /locus_tag="B565_2415" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393067.1" /db_xref="GI:330830115" /db_xref="GeneID:10488332" /translation="MHNISRETLLEWVKQGRLAPEKLADALTLADLPPHPARWQWLFD RLLLWLGALCIGAGLIFFVAFNWQELGRVSRLALLEAPLLAMLLLLWRKPLGDTPRQA LLLAIALNIGALLALVGQTYQTGADPWQLFATWALMLVPLAAFGQSPLLWTLSWLLGQ LALVLYWRLGLFTFFFTFDEEGLGWCLTLLNAALWGLLLLAPNRWRLMPGWLAGLAAG LGATLLTLLALFDAASALVWPLWLGWLAAAYALWHHRFIAGLAMGCLSLIAVILAALG KWMEPDINGFLLLSLIAIGLSVTAARWLQQQRRSHE" misc_feature 2727558..2727977 /locus_tag="B565_2415" /note="Predicted membrane protein (DUF2157); Region: DUF2157; cl10480" /db_xref="CDD:195973" gene 2728465..2729469 /locus_tag="B565_2416" /db_xref="GeneID:10488333" CDS 2728465..2729469 /locus_tag="B565_2416" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393068.1" /db_xref="GI:330830116" /db_xref="GeneID:10488333" /translation="MSDLTLWQALQQANLVEGDQPRDTQPHWSSRFLLGLVGWIAALF LLFFLFLTFEQLTREANSALLLGAVLLAGAYALNRSQRGDLWDQFVLALTLAADAWLL YGLLDQLDLHHTLLWFGLCLLSLAIAVLFDHWLVRLFHSVAAALLLTLGLACLGLQLL ALPLVMAAITFCWLRADRDPERHQLYHSITLGLALSLLVLGRLHHPLWDGGSSVLDEL GLSRLPLWLNPLLCAALLLAVMVKLKLPLLFGLPLVLISAIIPGMGAGALVLILGFYA GSLGLMTLSALLLLGYGSLYYYDLGLTLMTKSWLLLGSGILLLGARQRLITFAARSDS " gene 2729466..2729984 /locus_tag="B565_2417" /db_xref="GeneID:10488334" CDS 2729466..2729984 /locus_tag="B565_2417" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="YP_004393069.1" /db_xref="GI:330830117" /db_xref="GeneID:10488334" /translation="MKPVTRQLALLLSGLAILAGINATVWRYEHAMSSGEVVLLRLAP VDPRSLMQGDYMRLNYEIARELTSRDAQTTQNKGSDTLVIRLDAHQVASLVADGKPDR LASDERLLQVHQSERQWQIGPDAYFFEEGTAEQYEAARYGEFRLQADGKTLLVGLRDE AYQPIGQTRARW" misc_feature 2729529..2729960 /locus_tag="B565_2417" /note="Uncharacterized membrane-anchored protein [Function unknown]; Region: COG4929" /db_xref="CDD:34538" gene 2730056..2730802 /locus_tag="B565_2418" /db_xref="GeneID:10488335" CDS 2730056..2730802 /locus_tag="B565_2418" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393070.1" /db_xref="GI:330830118" /db_xref="GeneID:10488335" /translation="MRIWLICHLLLLCWASTARADLGKLEYLTEEYPPYNYSDPQGQP TGLAVDLLQMIWQHSGVTPQPVRILPWARGYYLLTQKPNVVLFSTARTQAREDLFKWV CPIGYSEYILLGRKAQNITLTAFDQMSQYKISAVRSDAADQLLLNNGMDDNNIIPANR LSQGLKMLLSGRADLLATSKLAGYDAIRELKLSSDDFNVAMVLSAEQLCYAFSRQVPD SEITLFQQGLTRALASEEFRKLQAKYLPVR" misc_feature 2730140..2730796 /locus_tag="B565_2418" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature 2730146..2730790 /locus_tag="B565_2418" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature order(2730149..2730151,2730266..2730268,2730338..2730340, 2730473..2730475,2730590..2730592) /locus_tag="B565_2418" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(2730539..2730541,2730551..2730553,2730569..2730571) /locus_tag="B565_2418" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 2730671..2730688 /locus_tag="B565_2418" /note="hinge residues; other site" /db_xref="CDD:29040" gene 2730933..2731679 /locus_tag="B565_2419" /db_xref="GeneID:10488336" CDS 2730933..2731679 /locus_tag="B565_2419" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393071.1" /db_xref="GI:330830119" /db_xref="GeneID:10488336" /translation="MRTWHLPHLLLLLWATFAQADPGKLEYLSEISPPFNFSDQQGMP TRLSVELMQLIWKARGVSPQPIRIMPWARGYNLLQQKPNVVLFATARTPQREALFKWA CPIDHSEFVLLGRKADNITLGSEAEISRYKVGVVRSTVSKQLLLERGIDERQLMLANR LTQAAKMLTSGRADLFATNKLAGYQTLQQQGFKPDDFHVAFVLDARPLCYAFSRQVPD SEVALFQQALTHVVASADFSALQAKYLPLR" misc_feature 2731014..2731667 /locus_tag="B565_2419" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature 2731026..2731670 /locus_tag="B565_2419" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature order(2731026..2731028,2731143..2731145,2731215..2731217, 2731350..2731352,2731467..2731469) /locus_tag="B565_2419" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(2731416..2731418,2731428..2731430,2731446..2731448) /locus_tag="B565_2419" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 2731548..2731565 /locus_tag="B565_2419" /note="hinge residues; other site" /db_xref="CDD:29040" gene 2731819..2732574 /locus_tag="B565_2420" /db_xref="GeneID:10488337" CDS 2731819..2732574 /locus_tag="B565_2420" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393072.1" /db_xref="GI:330830120" /db_xref="GeneID:10488337" /translation="MKPWIGLAGALLATLAQASPELGKLHYITEDYKPYNYADASGAP TGLAVELLQLVWKKTNTPAQPVTIMPWARGYYLLTQKPNAVLFSTARTQARDPLFKWA CPIGYAEIVLVGLADRNITITKLDDAKAFNIGAVRADVGEQLLLNNGFDESKLMAANR LAQALKMLTSGRVDLVSTNKTTMEQLIVEQKLDPARFKEQWVLSSEQFCFAFSHPVSD ELVKEFQTGLTQVLASSEYPLLHSKYFPTPAAK" misc_feature 2731900..2732559 /locus_tag="B565_2420" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature 2731909..2732553 /locus_tag="B565_2420" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature order(2731912..2731914,2732029..2732031,2732101..2732103, 2732236..2732238,2732353..2732355) /locus_tag="B565_2420" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(2732302..2732304,2732314..2732316,2732332..2732334) /locus_tag="B565_2420" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 2732428..2732445 /locus_tag="B565_2420" /note="hinge residues; other site" /db_xref="CDD:29040" gene 2733701..2734201 /locus_tag="B565_2421" /db_xref="GeneID:10488338" CDS 2733701..2734201 /locus_tag="B565_2421" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393073.1" /db_xref="GI:330830121" /db_xref="GeneID:10488338" /translation="MDYHLDWIYASLFLTQEHDEKTFPRNFIDNNKKVDLQISGTQED VDFLLAFVDHENTTHIVMIEAKGDSYFSNAQLNSKNKRFKAIFGDEDTWPNVRPHFLL CSPKEPQNVTIEDPVYFMLTKDQNPIWFPLIMGTGKNKVTRCMDGDKNNKPSSEGDHW KVENRT" gene 2734556..2736202 /locus_tag="B565_2422" /db_xref="GeneID:10488339" CDS 2734556..2736202 /locus_tag="B565_2422" /codon_start=1 /transl_table=11 /product="SMC domain-containing protein" /protein_id="YP_004393074.1" /db_xref="GI:330830122" /db_xref="GeneID:10488339" /translation="MKLIHIYVESYKHLKNINIILHGGFKCEHVGGVLSIASSPTIDT YYKGSSFQAIIGKNGVGKTSILDLISSDGTDPNQQLFMVWYNDKNEYEIHTRYYAPKD VNADKKYKILHEYLDGNVRIAKINNISEPFSSLNKNMGTVSTLTPSIYKSTKANRRYQ NKILSNFFSSSKYYQNELRPKYKITLYKLDDQKLSKIFYNIERDKATHKILNELLLKK NLNIHDIKNTFISYENDNGISVRNNFILSISSQIAKNNPQLINGSQVQIAAILLAHIF STHGISLTSIDLWEKEYIDNIDKWSDDVRRSNSFRPEKENTYLTLKNNITAIDNIIVN LSNYDNKNYHNIDEFPDRTTFIHSEPNQIQYIMEGLERSKYHLNDAFEYGWDGLSSGE LAKALLLANIFRYIQKTKGVTNHIILMDEIDIYLHPEWQRKIISEIISLISTESVAEK FQFIITSHSPIVISDLLPENIVSLSKRDNGVVFISESPGYATQITDLYLQGLHISSTY GEITNDTLTRLLNKNTRTQDDIDIISRISSNNIRSLLERI" misc_feature <2735717..>2735968 /locus_tag="B565_2422" /note="Predicted ATP-binding protein involved in virulence [General function prediction only]; Region: COG3950" /db_xref="CDD:33731" gene 2736199..2737368 /locus_tag="B565_2423" /db_xref="GeneID:10488340" CDS 2736199..2737368 /locus_tag="B565_2423" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393075.1" /db_xref="GI:330830123" /db_xref="GeneID:10488340" /translation="MIHINANLNRNLINEIEQHVRLNVIPYVRAFSEQIPENHRNIFN ELFSNDNIMSLINASPTELENIADHIYTTLPQLAERYHPYRYYSQINENLTDIEDIDV RGNEELIILKATRVLDEITNLNPGNQENPFSYVKDNLSANALGKKLTALKKIQNFKRS RYKITKKYIENFSPWLQSPFSMFDYDTFRGIFNERIIESYNLTPCPFCAYDSVEIVRT ARKTYIPALDHFLPKSKYPFLALSINNLLPSCYRCNSSFKKESDMLEHFHPKRDSVEQ IDIFQFSVLPDTPFNSPESSRITVGINNNCPKLLKNSVIFELEGVYNLKNIKKKFLDM RERIELYKSMGGTHIDDILSNPERIRLLLNVDLNASPQDIPLQKFKIEALKSLRP" gene complement(2737545..2738921) /locus_tag="B565_2424" /db_xref="GeneID:10488341" CDS complement(2737545..2738921) /locus_tag="B565_2424" /codon_start=1 /transl_table=11 /product="Cysteinyl-tRNA synthetase" /protein_id="YP_004393076.1" /db_xref="GI:330830124" /db_xref="GeneID:10488341" /translation="MLKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTF VAFDVVARYLRYAGYDLTYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDA LGMVRPDIEPRATQHIEEIIELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDL EQLQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLG NHFDIHGGGSDLQFPHHENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFT IRDVLAHYDAETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAGG DEQVARFKEAMDDDFNTPEAYSALFDLVREINRQKAEDMVVAAALGARLRELGAVLGI LQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLEDSA GKTSWRRA" misc_feature complement(2737548..2738921) /locus_tag="B565_2424" /note="cysteinyl-tRNA synthetase; Validated; Region: cysS; PRK00260" /db_xref="CDD:178951" misc_feature complement(<2738565..2738915) /locus_tag="B565_2424" /note="catalytic core domain of cysteinyl tRNA synthetase; Region: CysRS_core; cd00672" /db_xref="CDD:173899" misc_feature complement(order(2738574..2738576,2738718..2738720, 2738724..2738726,2738790..2738795,2738802..2738807, 2738811..2738813,2738829..2738840)) /locus_tag="B565_2424" /note="active site" /db_xref="CDD:173899" misc_feature complement(2738802..2738813) /locus_tag="B565_2424" /note="HIGH motif; other site" /db_xref="CDD:173899" misc_feature complement(2738007..>2738309) /locus_tag="B565_2424" /note="catalytic core domain of cysteinyl tRNA synthetase; Region: CysRS_core; cd00672" /db_xref="CDD:173899" misc_feature complement(2738112..2738126) /locus_tag="B565_2424" /note="KMSKS motif; other site" /db_xref="CDD:173899" misc_feature complement(2737551..2738006) /locus_tag="B565_2424" /note="Anticodon-binding domain of cysteinyl tRNA synthetases; Region: Anticodon_Ia_Cys; cd07963" /db_xref="CDD:153417" misc_feature complement(order(2737554..2737556,2737578..2737589, 2737614..2737616,2737623..2737625,2737635..2737637, 2737650..2737652,2737662..2737664,2737824..2737826, 2737833..2737835,2737842..2737847,2737854..2737856, 2737863..2737868,2737872..2737874,2737950..2737952, 2737959..2737961,2737968..2737970,2737977..2737979, 2737989..2737991,2737998..2738000)) /locus_tag="B565_2424" /note="tRNA binding surface [nucleotide binding]; other site" /db_xref="CDD:153417" misc_feature complement(order(2737578..2737586,2737614..2737616, 2737623..2737625,2737635..2737637,2737650..2737652, 2737662..2737664)) /locus_tag="B565_2424" /note="anticodon binding site; other site" /db_xref="CDD:153417" gene 2739134..2739631 /locus_tag="B565_2425" /db_xref="GeneID:10488342" CDS 2739134..2739631 /locus_tag="B565_2425" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase B" /protein_id="YP_004393077.1" /db_xref="GI:330830125" /db_xref="GeneID:10488342" /translation="MVTLHTNHGDITLTLNAEKAPETVANFLQYCRDGHYDNTIFHRV IDGFMIQGGGYAPGFEEKDTRAPIKNEAANGLSNKIGTIAMARTMEPHSASAQFFINV NNNDFLDFKSATTQGFGYCVFGEVTAGMDVVNKIKGVKTGNYGRIHQDVPVEDVVITK VTLAD" misc_feature 2739140..2739616 /locus_tag="B565_2425" /note="cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E. coli cyclophilin A and Streptomyces antibioticus SanCyp18. Compared to the archetypal cyclophilin Human cyclophilin A, these...; Region: cyclophilin_EcCYP_like; cd01920" /db_xref="CDD:29391" misc_feature order(2739260..2739262,2739266..2739268,2739275..2739280, 2739284..2739286,2739389..2739406,2739428..2739430, 2739452..2739457,2739491..2739493) /locus_tag="B565_2425" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:29391" gene 2739621..2740418 /locus_tag="B565_2426" /db_xref="GeneID:10488343" CDS 2739621..2740418 /locus_tag="B565_2426" /codon_start=1 /transl_table=11 /product="HIT family protein" /protein_id="YP_004393078.1" /db_xref="GI:330830126" /db_xref="GeneID:10488343" /translation="MLTDLCRLGTDKTAAPAAVFPSASPTASPNWRRLDYLAHGNPRQ RSAHALLTAGVWDELAAQCSDMALVSTLAIGLDRPGSDLDILCQHTDPAEFAAIFAEQ GWQASAKGDNIWLLERIFACLDQSCADNGCDNRITNWPLELYVTPAPIETLNGWRHLT LMAALLERFGDAFYREVLRLRLEEGLKGEAAMCRLLGLAGDPYAALLTLEGRNLAELS WQPPSRDDIHTATGAMAPAAHCSSPVVSTISATPVCPVSTESPTPTS" gene 2740415..2741170 /locus_tag="B565_2427" /db_xref="GeneID:10488344" CDS 2740415..2741170 /locus_tag="B565_2427" /codon_start=1 /transl_table=11 /product="UDP-2,3-diacylglucosamine hydrolase" /protein_id="YP_004393079.1" /db_xref="GI:330830127" /db_xref="GeneID:10488344" /translation="MSTLFISDIHLSAQRPDMTAALVRFLEHDAPGADALYVLGDLFE FWIGDDDPNPLHQQMADAFLALSQQNVPIYFIHGNRDFLLGQQFAKRAGMTLLGDPCV IDLYGERVVLSHGDLLCTLDEGYQKFRRITQLKWLRWLFLRLPLARRQAIACKMRGQS QMENAHKSQIIMDVTPAAVDDTLRAHDCRMMIHGHTHRPAIHDFTLDGHPARRIVLGD WFEQGSVLVCRPGEQRLEMRALATIDPAAHPSV" misc_feature 2740415..2741011 /locus_tag="B565_2427" /note="Calcineurin-like phosphoesterase; Region: Metallophos; pfam00149" /db_xref="CDD:189420" misc_feature 2740424..2741071 /locus_tag="B565_2427" /note="Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain; Region: MPP_YbbF-LpxH; cd07398" /db_xref="CDD:163641" misc_feature order(2740436..2740438,2740442..2740444,2740535..2740537, 2740649..2740654,2740754..2740756,2740997..2740999, 2741003..2741005) /locus_tag="B565_2427" /note="putative active site [active]" /db_xref="CDD:163641" misc_feature order(2740436..2740438,2740442..2740444,2740535..2740537, 2740649..2740651,2740754..2740756,2740997..2740999, 2741003..2741005) /locus_tag="B565_2427" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:163641" gene 2741468..2744902 /locus_tag="B565_2428" /db_xref="GeneID:10488345" CDS 2741468..2744902 /locus_tag="B565_2428" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393080.1" /db_xref="GI:330830128" /db_xref="GeneID:10488345" /translation="MKKTVLTPLLALLITGCGGGDGEQEETPIRPPVTPNYFEASSQS SAGGQLNPTSLRLATGEQGRFSVQADSGYLLTGISGCDGTLDGLTYTTGPMSSDCQIS ASFTQESAAVYFDATTQASQGGVLSPDSLRLNAGEQGRFTVQPESGFVLAQVTGCEGT LTGNIYTTAPMRADCQVSARFISDAANAIAREDHTLASEQSLIAHARTAIADSEAHRT ELVRSLYQGMAQISWNPSHDSITFSSFQPESTVTLLPSNINGKGESEIRGLVMVSEQA GYRQAAMGANLFSVDRTAQSEALLKGLIGWLTRGKDSDGLRILTAQMPSRTDSWYFPH NEGVRDWLKAIYPDKHNINPANTCDYQALSDCIDTMAPELIVISDIDRQGLGYQGIAQ GIAKAKAAGIPLLLSNYRRDASPLLSPLYLDMGLVTWGNYWSKLRASDLAVNTIMAPD AQLMAVDTLLGNLLDRNFTTQWLDSCGGNFINCGGSESFNQQFKLGADWLRNAAITLD KAGISPFARDGVTLLPATLLLADKYRAAIDYPIAWDEHQSWQQAMFADWLVSYARTRT PAQPDLGEYVTDRNKVVKGQAAHYAYPATLTDSRRIAVPYSGQWTTTGWYSLPGQTIT LRRTDNADVSATVRLNYHRPNTNRAYEQKIYRAPLELTTGRLILAKGGSVTFTSPYGG PIYLYLEGGTASLAVQVSATGVTRHPAIMDFSDEQQIREFNERLEQTELPHIDLRADG AEQHLRRDRFTKAVGGVIPDTNALLDSIARDHINGVYTLAGLKIQGKGLDESLPADVK NACVALLGEGCLDESIHTRTIIQHANYDQNAHCGSGCSGNPWDSSGSISPTGWLDNHE LGHNLQTNRLNVQYAAADDADNWSGYGSRAGENSNNIFPYVVKWRAHYLRDGNTAPIK DGHMNHKDLFYVFMSDAAQVRDRSGNRVVLGANCKVLDTGESRYEAPWKSNAYAVHNG YRMAFYIQMALRAHRMLLTDGTRLNDGFTIFTLLYQHSRIFGAAADSEAQWNANKDRL GFSLFPYSGHAVYGGKRVRDIPGNDFMLVALSRLTGWDWRNHFDLLGLRYSSLAVAQV QANQRYGSLPMGMYVLEDDLPPANMSEGVTFLPLSESDGSTLWPRNSGSPSACPTP" gene 2745161..2745337 /locus_tag="B565_2429" /db_xref="GeneID:10488346" CDS 2745161..2745337 /locus_tag="B565_2429" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393081.1" /db_xref="GI:330830129" /db_xref="GeneID:10488346" /translation="MPDSNAVAHPFDAKKINVNDPYEMKQWVKMFECTEVQLKRAVKA VGTSGKAIRKYLKK" misc_feature 2745167..2745334 /locus_tag="B565_2429" /note="Protein of unknown function (DUF3606); Region: DUF3606; pfam12244" /db_xref="CDD:192966" gene 2745586..2745834 /locus_tag="B565_2430" /db_xref="GeneID:10488347" CDS 2745586..2745834 /locus_tag="B565_2430" /codon_start=1 /transl_table=11 /product="putative transglycosylase associated protein" /protein_id="YP_004393082.1" /db_xref="GI:330830130" /db_xref="GeneID:10488347" /translation="MGFISWIVLGLLVGILAKWIMPGRDGGGFFMTALLGIVGAMVGG YVGTLLGLGSVTGFNIPSIALATVGALIVLFVFNKIRS" misc_feature 2745586..2745831 /locus_tag="B565_2430" /note="Transglycosylase associated protein; Region: Transgly_assoc; cl00978" /db_xref="CDD:186289" gene complement(2745901..2747115) /locus_tag="B565_2431" /db_xref="GeneID:10488348" CDS complement(2745901..2747115) /locus_tag="B565_2431" /codon_start=1 /transl_table=11 /product="sensor histidine kinase TctE" /protein_id="YP_004393083.1" /db_xref="GI:330830131" /db_xref="GeneID:10488348" /translation="MDVPYVVLDSFERNMRDRLFYQVRGIDDRVISGFDDLPPMPDGT PLTDRYPALAYFYDGLYQEAPIRAVMLLQPVGEGGVNGMARITVAETLLGRQQLAEQL LWSALLTQGALVVLTLLLAYLLLKRLLTPMRRLSREILRRDAANLAPLPDLLPWQETR PLVQAFNRQLARLRQLVARQERFSADAAHQLRTPLTILKTQVEVARGSGDPALMSESL DAMAVRLDHTIALTERLLLLARLKSDECSGLRQREPMELTALVQQACLSRLAQARSKG IDLGYEGEESAIMVAGEPLLLGELCANLLDNAIKYTPPHGTVTARVVRSNGQIWLEVE DSGPGIAPELAERVWQPFQRLEQGSEQPGAGLGLALVRDIAHYHHGEVVLLPATQLGG LLVRLILPLATP" misc_feature complement(2746807..>2747112) /locus_tag="B565_2431" /note="Two-component sensor kinase N-terminal; Region: 2CSK_N; pfam08521" /db_xref="CDD:149540" misc_feature complement(<2746435..2746569) /locus_tag="B565_2431" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cl00080" /db_xref="CDD:153499" misc_feature complement(2745964..2746227) /locus_tag="B565_2431" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(2745964..2745966,2746012..2746023, 2746096..2746101,2746105..2746107,2746111..2746113, 2746117..2746119,2746186..2746188,2746195..2746197, 2746207..2746209)) /locus_tag="B565_2431" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(2746195..2746197) /locus_tag="B565_2431" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(2746015..2746017,2746021..2746023, 2746099..2746101,2746105..2746107)) /locus_tag="B565_2431" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(2747300..2747974) /locus_tag="B565_2432" /db_xref="GeneID:10488349" CDS complement(2747300..2747974) /locus_tag="B565_2432" /codon_start=1 /transl_table=11 /product="Tricarboxylic transport regulatory protein" /protein_id="YP_004393084.1" /db_xref="GI:330830132" /db_xref="GeneID:10488349" /translation="MRLLLAEDNHELAHWLSRALTSAGFAVDWVADGAQADHLLRHEQ YALAVLDIEMPKLDGLAVLGRLRSRGQGVPVLLLTARGAVEERICGLNAGADDYLAKP FDLGELDARLRALLRRSESGGAELRLGRLTLHPDGYFLLADARLALTPRELALLTALM YRHGRPVAKGQLFEQVFNLDDEVGLDSIDLYIHRLRKKLVGSGVVITTLRGLGYLLEA APEASH" misc_feature complement(2747324..2747974) /locus_tag="B565_2432" /note="transcriptional regulatory protein TctD; Provisional; Region: PRK15479" /db_xref="CDD:185376" misc_feature complement(2747666..2747965) /locus_tag="B565_2432" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(2747669..2747674,2747681..2747683, 2747738..2747740,2747798..2747800,2747822..2747824, 2747951..2747956)) /locus_tag="B565_2432" /note="active site" /db_xref="CDD:29071" misc_feature complement(2747822..2747824) /locus_tag="B565_2432" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(2747798..2747806,2747810..2747815)) /locus_tag="B565_2432" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(2747666..2747674) /locus_tag="B565_2432" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(2747327..2747599) /locus_tag="B565_2432" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cd00383" /db_xref="CDD:29475" misc_feature complement(order(2747336..2747338,2747351..2747353, 2747378..2747383,2747405..2747407,2747414..2747416, 2747468..2747473,2747528..2747530)) /locus_tag="B565_2432" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29475" gene 2748197..2749183 /locus_tag="B565_2433" /db_xref="GeneID:10488350" CDS 2748197..2749183 /locus_tag="B565_2433" /codon_start=1 /transl_table=11 /product="Tricarboxylic transporter" /protein_id="YP_004393085.1" /db_xref="GI:330830133" /db_xref="GeneID:10488350" /translation="MKQRTRHALALLTLLGALPLQAAESATTPSRTECIAPAKPGGGF DLTCKLLQVSLQETGTIDKPMRVTYMPGGVGAVAYNAIVAQRPAEAGTVVAFSGGSLL NLSQGKFGRYGVDDVRWLAAVGTDYGMIAVRHDAPYQNLKELVSAMERDPNSVVIGAG ASIGSQDWMKTALLAKQAGVDPHKMRYVAFEGGGEPVTALLGNHVQAVSGDLSEMVPY IGGDKLRVLAVFSAERLPGKLATIPTAKEQGYDLVWPVIRGFYVGPKVSDSEYQWWKQ TFDQLVKTDTFKAQRDLRGLFEFDLTGEALDSYVKEQVAQYREQAKAFGLAK" misc_feature 2748266..2749180 /locus_tag="B565_2433" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3181" /db_xref="CDD:32994" misc_feature 2748350..>2748946 /locus_tag="B565_2433" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene 2749195..2749626 /locus_tag="B565_2434" /db_xref="GeneID:10488351" CDS 2749195..2749626 /locus_tag="B565_2434" /codon_start=1 /transl_table=11 /product="Tricarboxylic transport" /protein_id="YP_004393086.1" /db_xref="GI:330830134" /db_xref="GeneID:10488351" /translation="MSDRIFAAIWLLLCLAGAAIAWQIQSEYSYEPLGPRPFPLGIIG LMALCALLLLRRQPDTVSWPPLRTLRHLAIMVVALAGYGASFEWLGFPLATTLLTFVL GRLFGASAKAALLSGVVGGLVLYLAFDRLLDVTLPLGVWFS" misc_feature 2749195..2749605 /locus_tag="B565_2434" /note="Tripartite tricarboxylate transporter TctB family; Region: TctB; pfam07331" /db_xref="CDD:191726" gene 2749636..2751168 /locus_tag="B565_2435" /db_xref="GeneID:10488352" CDS 2749636..2751168 /locus_tag="B565_2435" /codon_start=1 /transl_table=11 /product="Tricarboxylic transport" /protein_id="YP_004393087.1" /db_xref="GI:330830135" /db_xref="GeneID:10488352" /translation="MDTWMYLSQGFAVALTPENLVIALIGCFVGTVVGLLPGLGPING VAILLPLAFALKLPPESALILLATVYIGCEYGGRISSILLNVPGDAAAIMTALDGYPM AQQGKAGVALSISAVSSFVGSMLAIGGIILFAPALARWSLAFGPAEYFALMVFAIACL GSMMSQNPLKSFMAALIGLGLATVGVDANTGVYRFTFDSVHLSDGVQFIVVVIGLFSV SEILLMLEHTSGGGKLVRTTGRMLFNFKELVHCTGTMLRSSTIGFFVGILPGAGATIA SAITYMTEKRLAGPNAKFGEGDIRGVAAPEAANNASACGSFIPMLTLGVPGSGTTAVM MGALTLYNITPGPTMFTEQPDVVWGLIAALLLANVMLLVMNIPMVGLFTRMLSIPLWF LVPAIASVSAVGVYAVHSTTFDLLLMVALGVFGYLLRKMHFPMSPLILGFVLGEMLEQ NLRRALSISNGDTAILWSSGISQTLLVLAIAVITLPPLVRLLRRRKADPLIPDAHPEQ GA" misc_feature 2749636..2751084 /locus_tag="B565_2435" /note="Tripartite tricarboxylate transporter TctA family; Region: TctA; cl00772" /db_xref="CDD:153985" gene complement(2751752..2752060) /locus_tag="B565_2436" /db_xref="GeneID:10488353" CDS complement(2751752..2752060) /locus_tag="B565_2436" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393088.1" /db_xref="GI:330830136" /db_xref="GeneID:10488353" /translation="MDNEVDYRYIAKVAKAFPIEHVEKALFEWVAPVCYTKMLTPVPE IWSGFERDRLWLDIQALLKEESEAGLLKKTTINLRQFYLRREYAEEWGKLQRMLSGGG " gene complement(2752145..2753110) /locus_tag="B565_2437" /db_xref="GeneID:10488354" CDS complement(2752145..2753110) /locus_tag="B565_2437" /codon_start=1 /transl_table=11 /product="phage integrase" /protein_id="YP_004393089.1" /db_xref="GI:330830137" /db_xref="GeneID:10488354" /translation="MRKQFATKGEALAFERFVLDPDKGKPWLEGQGEPIDGRRLSDLV ELWFGRHGQSLRDGEARKSKLLTVCHYLGDPLAVNFTARDFAAYREARLSGDITDRRA INQEKQGVTPNTVNREHAYLRAVFNELKRLGEWQSENPLDGLRAYKVAEAELAFLYPD ELKRLLAACAESPNPDLLLVVKLCLATGARWSEVEELTQSQVSPNRITFTRTKSKKSR SVPISPELYAQLPRKRGRLFSDCYRAFEMVVERAGLELPAGQNTHVLRHTFASHFMMN GGNILVLQKILGHSTIAMTMRYAHFAPDHLEDAIRLNPLSVCGLE" misc_feature complement(2752163..2753107) /locus_tag="B565_2437" /note="integrase; Provisional; Region: int; PHA02601" /db_xref="CDD:164996" misc_feature complement(2752169..2752633) /locus_tag="B565_2437" /note="Phage HP1 integrase, C-terminal catalytic domain. Bacteriophage HP1 and related integrases are found in eubacteria, plasmids and temperate bacteriophages of the P2 family. They belong to the DNA breaking-rejoining enzyme superfamily, which includes...; Region: HP1_INT_C; cd00797" /db_xref="CDD:29498" misc_feature complement(order(2752169..2752171,2752175..2752177, 2752283..2752285,2752292..2752297,2752304..2752306, 2752556..2752558,2752565..2752567,2752622..2752624)) /locus_tag="B565_2437" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29498" misc_feature complement(order(2752217..2752219,2752244..2752246, 2752313..2752315,2752322..2752324,2752472..2752474, 2752541..2752543)) /locus_tag="B565_2437" /note="Int/Topo IB signature motif; other site" /db_xref="CDD:29498" misc_feature complement(order(2752217..2752219,2752244..2752246, 2752310..2752315,2752322..2752324,2752541..2752543)) /locus_tag="B565_2437" /note="active site" /db_xref="CDD:29498" misc_feature complement(order(2752217..2752219,2752244..2752246, 2752313..2752315,2752322..2752324,2752541..2752543)) /locus_tag="B565_2437" /note="catalytic residues [active]" /db_xref="CDD:29498" gene complement(2753261..2755048) /locus_tag="B565_2438" /db_xref="GeneID:10488355" CDS complement(2753261..2755048) /locus_tag="B565_2438" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393090.1" /db_xref="GI:330830138" /db_xref="GeneID:10488355" /translation="MSNTFSDISVDSFVELCNEITIPPFEHGYYSLSDIYRNALVKAE EDKNGLADALSLIYEICSMTLSPSSTNDVFRPYLQLESKRSASVDDFSAEQLGFISEV YDKIHEPLLKARLADLLWYIGKPRNRKYVDDAIESYINIAINENTWSIYVKDCWSRAI GLARQVRATSIISKIEGFLYEAFENDYQNASYMKLWLAETIIEHGLCENQIGVIASVL FECAQSCLIAKEYIQSRQYCLLAEKASRYSNDTELLLKVLMVHAESYECEGDAKSSVQ MVANIFYTDALQAYRRIPVKHREQLGVEERVQSIRRKINESGAAALTEMGTFKSPKIN ISEIAKNAENHVKDKNNIELALMYFVGFSITNYSESREQALKQIKKYPLSNLFSSSYM SVDGRVIAKTPSFNFNGDDSEIVIHHKMIQNFKYAIPLHVKGCIIPALNQILSEYRIT REFLIKVCALSPIIPDGREELMASALWFGFEYDFSSCIYILAPQVENIVRVLFKSNGV NTSNVDRDGIETECGLSTLLNNPSAENILGKDILFELQAVFTESVGINLRNEVAHGLL SDQESNSQYCVYAWWMILRMIIKSLYHLK" gene complement(2755104..2755574) /locus_tag="B565_2439" /db_xref="GeneID:10488356" CDS complement(2755104..2755574) /locus_tag="B565_2439" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393091.1" /db_xref="GI:330830139" /db_xref="GeneID:10488356" /translation="MDIRYIIYVNAKGEVKSYELEDISENDIYIQAVHDGKLKTFRQD RVLFEGEDVVSLENEIQHLLKSGHIEVQKPKVKALLEVCFTGFSKKEKDELVQLAESM QCLVRKSVTTDLDVLCYGDNAGPSKMRDARNKSVLVINKVEFISMLNTGEIPNE" misc_feature complement(2755128..>2755406) /locus_tag="B565_2439" /note="NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]; Region: Lig; COG0272" /db_xref="CDD:30621" gene complement(2755602..2756036) /locus_tag="B565_2440" /db_xref="GeneID:10488357" CDS complement(2755602..2756036) /locus_tag="B565_2440" /codon_start=1 /transl_table=11 /product="phage repressor" /protein_id="YP_004393092.1" /db_xref="GI:330830140" /db_xref="GeneID:10488357" /translation="MLPGKRIPILSYVQAGNWREMCEQATTFDGNVEFVSASGEIGPF GFGLWLRGDSMLPQFKEGDLIIVDPDEAPQPGDYVVAKNGSNEATFKKYRPRGIDENG QEVFELVPLNEDYPTMHSDRQHIQIIGVMVEHRIFRKRQTGR" misc_feature complement(2755641..2755901) /locus_tag="B565_2440" /note="Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (...; Region: S24_LexA-like; cd06529" /db_xref="CDD:119397" misc_feature complement(order(2755764..2755766,2755875..2755877)) /locus_tag="B565_2440" /note="Catalytic site [active]" /db_xref="CDD:119397" gene 2756629..2756898 /locus_tag="B565_2441" /db_xref="GeneID:10488358" CDS 2756629..2756898 /locus_tag="B565_2441" /codon_start=1 /transl_table=11 /product="putative regulator for prophage" /protein_id="YP_004393093.1" /db_xref="GI:330830141" /db_xref="GeneID:10488358" /translation="MIIAPIHIDTPVCTVESFSERTGLTQRTVENYVRAGRIPIMPKQ GRSEKVLINLVLYTQQAMNQPGLEPISKPVRTPRVSRKQRDEDHV" gene 2756891..2757400 /locus_tag="B565_2442" /db_xref="GeneID:10488359" CDS 2756891..2757400 /locus_tag="B565_2442" /codon_start=1 /transl_table=11 /product="phage protein" /protein_id="YP_004393094.1" /db_xref="GI:330830142" /db_xref="GeneID:10488359" /translation="MFEQTCSKHPHWVSACQRFAANHNVAELADKAGINPQTLRNKLN PDQPHELTVVELIAITQASEGDETLFDGALFCCGLTAIAIPEREKGPSLAHQVIDTTA KVAGLGAQALTVVESGRVTKGQRNALVGAATAAMGNLALLITEIEHKYQAIPSLSCAL DMARMAAGA" misc_feature 2756909..2757373 /locus_tag="B565_2442" /note="Phage regulatory protein CII (CP76); Region: Phage_CP76; pfam06892" /db_xref="CDD:148487" gene 2757409..2757633 /locus_tag="B565_2443" /db_xref="GeneID:10488360" CDS 2757409..2757633 /locus_tag="B565_2443" /codon_start=1 /transl_table=11 /product="putative phage transcriptional activator Ogr/Delta" /protein_id="YP_004393095.1" /db_xref="GI:330830143" /db_xref="GeneID:10488360" /translation="MRLICPHCGARASTRTSIRMSPLCGIATYQCSNVDCGHTFKAGF EIIATISPSAMPNPAIVLPIVPRRVKEVAQ" misc_feature 2757418..2757558 /locus_tag="B565_2443" /note="Ogr/Delta-like zinc finger; Region: Ogr_Delta; cl04623" /db_xref="CDD:194929" gene 2757683..2758135 /locus_tag="B565_2444" /db_xref="GeneID:10488361" CDS 2757683..2758135 /locus_tag="B565_2444" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393096.1" /db_xref="GI:330830144" /db_xref="GeneID:10488361" /translation="MQHTQHEPRNIAGLTAEEQVLMNTAGIALLREHLNRAGSNLDGD WLNAPKTKRVAICTIARQPWDSLMMATLSALPYQQREAIRLAVIALDYQSLFHSGCDP KVWHPSVKVMPAELAERKKREQAKRQQLDHAVHVAGQIGQEGPRPIGH" gene 2758201..2758389 /locus_tag="B565_2445" /db_xref="GeneID:10488362" CDS 2758201..2758389 /locus_tag="B565_2445" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393097.1" /db_xref="GI:330830145" /db_xref="GeneID:10488362" /translation="MATLAIPCALRNLRIQQRKLTGRYGTRLSQHPDGVALLERSTAL AWASLFSCINPCTPQQGA" gene 2758392..2758652 /locus_tag="B565_2446" /db_xref="GeneID:10488363" CDS 2758392..2758652 /locus_tag="B565_2446" /codon_start=1 /transl_table=11 /product="phage transcriptional protein" /protein_id="YP_004393098.1" /db_xref="GI:330830146" /db_xref="GeneID:10488363" /translation="MTAQPTQINLLNHHAAKRLRQLREQLKLSRPKFADLLGIPPTTL KNYELGYREIGGGLFLLIANHPELKRHIDWLLTGIATPEVQP" misc_feature <2758485..2758616 /locus_tag="B565_2446" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cl09100" /db_xref="CDD:195788" gene 2758649..2758849 /locus_tag="B565_2447" /db_xref="GeneID:10488364" CDS 2758649..2758849 /locus_tag="B565_2447" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393099.1" /db_xref="GI:330830147" /db_xref="GeneID:10488364" /translation="MRQIFHPISQQEALAELPRLQQRLTAKARPASFTYRGSEGKSLL VQAQQSLRWHQLFHHLNRRARP" gene 2758846..2759052 /locus_tag="B565_2448" /db_xref="GeneID:10488365" CDS 2758846..2759052 /locus_tag="B565_2448" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393100.1" /db_xref="GI:330830148" /db_xref="GeneID:10488365" /translation="MSDAIKIANQAPKVIEGLLAEMFAARAEDNRIALGALYSGDEYI QVQLVVTSKPADLLDDDLVMGDEA" gene 2759049..2759249 /locus_tag="B565_2449" /db_xref="GeneID:10488366" CDS 2759049..2759249 /locus_tag="B565_2449" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393101.1" /db_xref="GI:330830149" /db_xref="GeneID:10488366" /translation="MSTTLFTLASLKEWLAQNESKLLPTAPLCCGGELGISIRIEAGH IAIDEPDFQAIDEACDEQLRTV" gene 2759215..2759538 /locus_tag="B565_2450" /db_xref="GeneID:10488367" CDS 2759215..2759538 /locus_tag="B565_2450" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393102.1" /db_xref="GI:330830150" /db_xref="GeneID:10488367" /translation="MRHAMSNFELFELDAQQEQSETGPAHMQPTTPVSQLTTHWFAAR AEFIAAGSDARGNRDQVAELLALGAMRTVYWLAAANLELALAREIAEWWAECAPLHGQ GEIIK" gene 2759535..2759792 /locus_tag="B565_2451" /db_xref="GeneID:10488368" CDS 2759535..2759792 /locus_tag="B565_2451" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393103.1" /db_xref="GI:330830151" /db_xref="GeneID:10488368" /translation="MSHGLQWELTLLQDRWQATYREDAARLRLYQRELAHARRLPARP HASIKQLLRQCAAARRLKEHAQMSVRGCQFRIKQLSGYLSA" gene 2759789..2762029 /locus_tag="B565_2452" /db_xref="GeneID:10488369" CDS 2759789..2762029 /locus_tag="B565_2452" /codon_start=1 /transl_table=11 /product="phage protein" /protein_id="YP_004393104.1" /db_xref="GI:330830152" /db_xref="GeneID:10488369" /translation="MTSKTKRLPLSKRTLRQRIDTLCNSLPGVNFDAAFAGDRGQYDL IWAMQLLDGLSTELTKNLFKQYIRRRKDCSFTHCRSANIWLRERTKWVRMQLQTIPVD PKQMRDDSGRKQIAHQFANQTAAIYKHIEQSIKEGAEADLLQTWELMRQPADQWGFIG ELPKFKTDEMRDNWILSVLVRLLSAKWWEKRVNRCWDRLQEQINILLGKVRKGVSAYV SNATMKVVRERKRAMIRWLAESEVVNGQYDLVVSMKDCWEASNANPVNRRNEMMVRAR GFNDYAEEQGHVGVFFTWTAPSRFHAWTQKHNGKAVENKRYQGATPRETCAYLAKLWS RARAALKRWNAPVYGFRVCEAHHDGTPHWHLLLFMRPEDRNRVIGILQRYALTDDHEE LVRDIKGAPPFTDFTPRFDWKEIDPAKGDAAGYIAKYIAKNIDGAYLDDDEEAGTAAD EGALHAVAWASWWGIRTFQQIGGAPVGVWRELRRISNAKKHADLVGPPKPVLQDPRFE AARFAADNGIFRCYLHAMGGALATRAEHPIKLAHLIEEQANCYGEDIKRLMGITSARL GIKTRLQGWEIVPAGTHEARKAAEAAARGVGVKTGDSPAPWSSDNNCTRPDPEAFADQ IMREQWGLSPFSIDRLRAGSSVSTDGFTLWLENGQLQSGRALPSEPDWLPDGQKPAEQ NQPDEYAVPEGDQDWPMLVELCGEVYQAQGHAGAHRWIEMLPEPYQSEMWKVLEGLDS LEWSGD" misc_feature 2760122..2761249 /locus_tag="B565_2452" /note="Bacteriophage replication gene A protein (GPA); Region: Phage_GPA; pfam05840" /db_xref="CDD:191383" gene complement(2762292..2763641) /locus_tag="B565_2453" /db_xref="GeneID:10488370" CDS complement(2762292..2763641) /locus_tag="B565_2453" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393105.1" /db_xref="GI:330830153" /db_xref="GeneID:10488370" /translation="MTKNAFDFSKEYEWTGEFYFKNFSHRFFGKVTYSSEKGLHLHYT APSTEDEIEKTRTGKVLYAALDNGRLCTLFGDFNFGYAGLRCSDINTHYGVFSVAFCI FGGHLSEDAKFDEVCFEFDNTQEFFFPAGYVDHIKFNKEALYKVVVPDGVISVENAAK FKYLPNDLRGALFCENEQALNDLQAAWDKIREEYKNVLLTFKTELSYYFRLKKNNNVP IKELLREVFRVSDLLSLFFDRPVYAKEIKFIERANPNDVKTLPVLASMAINKSTLKLA QSKVHHLHLPLTTRTVDLEKALMKWYQIDDSHSSIVSIIQHETGYRTEHETNSELVLF ATQLESINISLSGKSIEKYTKPINKYGSDLLIDRLRNALQVQKHDCYGKKLADLRNEI AHVGRPKTLLKAIGHYQRMVISRCLKLIIQSYLLSMLGIEDVHIKEYQKHNLPTNEG" gene complement(2763991..2765268) /locus_tag="B565_2454" /db_xref="GeneID:10488371" CDS complement(2763991..2765268) /locus_tag="B565_2454" /codon_start=1 /transl_table=11 /product="protein UmuC" /protein_id="YP_004393106.1" /db_xref="GI:330830154" /db_xref="GeneID:10488371" /translation="MNKRCAVALVDVNNFYASCERLFRPDLKGRPIVVLSNNDGCVVA RSAEAKALGIKMGIPYFQVRQFFEAMGGVWFSSNYALYGDMSNRVMTILEGMAPAVEV YSIDEAFIELSESWAGDLVAYGRQVRERVQQWTGLTVGVGIGRTKTLAKLANYAAKKW PATGGVVDLRDEARRARLMAITPVDEIWGIGRRLSAKLEAQGIKTVADLVAADPKALR RRYGVVVERTVQELRGIPCAELEQEAQAKQQIICSRSFGERITQIGSMHQALAGYMER AAEKLRGEGMCCRHVTLFIRTSPFSDREPYYGNQVSTKLAMPTHDTRALLALIPELLP RIWRDEQRYQKGGVMLADFTPASMQQGDLFAAQQQSPRSEALMQVIDKINQGRLGKVY FAARGRDTREWMMKREQLSPRYTTALGELPVVK" misc_feature complement(2763994..2765247) /locus_tag="B565_2454" /note="DNA polymerase V subunit UmuC; Reviewed; Region: umuC; PRK03609" /db_xref="CDD:179607" misc_feature complement(2764213..2765247) /locus_tag="B565_2454" /note="umuC subunit of DNA Polymerase V; Region: PolY_Pol_V_umuC; cd01700" /db_xref="CDD:176454" misc_feature complement(order(2764795..2764797,2764948..2764953, 2765119..2765121,2765128..2765130,2765221..2765226, 2765233..2765238)) /locus_tag="B565_2454" /note="active site" /db_xref="CDD:176454" misc_feature complement(order(2764354..2764356,2764360..2764374, 2764429..2764431,2764510..2764527,2764600..2764602, 2764687..2764707,2764948..2764950,2764957..2764959)) /locus_tag="B565_2454" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:176454" gene complement(2765265..2765627) /locus_tag="B565_2455" /db_xref="GeneID:10488372" CDS complement(2765265..2765627) /locus_tag="B565_2455" /codon_start=1 /transl_table=11 /product="peptidase S24-like domain-containing protein" /protein_id="YP_004393107.1" /db_xref="GI:330830155" /db_xref="GeneID:10488372" /translation="MACGFPSPAQDYTEQTIDLNQLCVAHPAATYFVRAAGDSMVDHG IRDGDLLVVDRSRKARHGSVVIAAVDGEFTVKKLQLAPTVALLPGNPAYRPIHFNEGQ ELEIFGVVSFVVHQVDTP" misc_feature complement(2765298..2765537) /locus_tag="B565_2455" /note="Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (...; Region: S24_LexA-like; cd06529" /db_xref="CDD:119397" misc_feature complement(order(2765400..2765402,2765511..2765513)) /locus_tag="B565_2455" /note="Catalytic site [active]" /db_xref="CDD:119397" gene 2766733..2767740 /locus_tag="B565_2456" /db_xref="GeneID:10488373" CDS 2766733..2767740 /locus_tag="B565_2456" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393108.1" /db_xref="GI:330830156" /db_xref="GeneID:10488373" /translation="MNKRYQVFVSSTYADLQDERAKVIQTLMEMDCIPAGMELFPAMD EEQFEFIKKIIDDCDYYLLILGARYGSISVDDGLSYTEKEYHYAKEKGMKIIALVHGE PDQLPVSKTDRNPELYEKLVNFRNEVCTNRLVKFWTSAIELPSLVALNLPKTIKAYPA VGWVRGNTTTSSEVLEELRSVKNENDELNKKIQELSHQLESYSSVNIPNLAGLDHNFT FTGHYKLIGEYHERTWTFEKTIGELFNLIAPSIQNTPNDTNARSLIKDCILEELNVRH VSSSTINDQQFQTFKIQLEALGLIHVKQSRTTNGGIALFWYVTEKGKKLMVELRVIRE T" gene complement(2768197..2769201) /locus_tag="B565_2457" /db_xref="GeneID:10488374" CDS complement(2768197..2769201) /locus_tag="B565_2457" /codon_start=1 /transl_table=11 /product="Portal vertex-like protein" /protein_id="YP_004393109.1" /db_xref="GI:330830157" /db_xref="GeneID:10488374" /translation="MSEQINSPAGVQAFTFGEAIPVLSQREVFDYLESMHNGRWYEHP LSLHGLARVYRAAVHHASAIQVKRNILRGCFIPHPKLSLAAFTGLVMDYEIFGNAHLQ RVRNRLGGTLRYDQMPAKYTRRSLDLDRYWWVPRPGDEVELPAGDVGHVMEADVNQEI YGIPDYVASLNSALLNESATLFRRRYYENGSHAGFILHISDALQNEGDITALKTALQN SKGPGNFRNLLLYTPGGKADSVKLIPVAEIAAKDDFLSIKGVSRDDQLAAHRVPPQLM GVVPNNTGGFGDVTKAAQVFDVNEIDSMKANFAQFNEWAGEEIIRFTSYRLSDLTVQS " misc_feature complement(2768221..2769168) /locus_tag="B565_2457" /note="Phage-related protein [Function unknown]; Region: COG4695; cl01923" /db_xref="CDD:194210" misc_feature complement(2768236..2769084) /locus_tag="B565_2457" /note="phage portal protein, PBSX family; Region: portal_PBSX; TIGR01540" /db_xref="CDD:162410" gene complement(2769201..2770967) /locus_tag="B565_2458" /db_xref="GeneID:10488375" CDS complement(2769201..2770967) /locus_tag="B565_2458" /codon_start=1 /transl_table=11 /product="phage-related terminase" /protein_id="YP_004393110.1" /db_xref="GI:330830158" /db_xref="GeneID:10488375" /translation="MTTAPIIFPHLDPRRQAMYLFFQGYPLRAIAELLQTPEGTVSTW KKRDGWEDIKPIDRVDSAIEARMIQLVMKETKSGGDFKEIDLLGRQLERIARVNKYSN GGNEADLNPKVANRNKGPKKAPDRNVVEPEQQERLIERFESTMFDYQRVWYQAGQEYR IRDLLKSRQIGATYFFAFEAFIDALVTGRNQIFLSASKAQAHMFKQYIIQFAKEEGVE LKGDPMVLPNGAHLYFLGTNARTAQSYHGNIYMDEYFWIHGFLEFRKVASGMAMHKKW RQTYISTPSSLSHPAYGFWSGANFNRGKAKADRVEIDLSHANLSAGKLCADGQWRQIV TVEDAVRGGCNLFDLDQLRSEYSEDEYRNLLMCEFMDDTESLFPLATLQRCMVDSWLV WEDYKPHTLRPLANRAVWIGYDPAKGGKGDSAGCAVLAPPLVPGGKFRVLERHRWQGM DFDAQAKSIRAICDRYNVAYIGIDTTGIGEGVYQLVKQFYPAVTAIQYNPNVKMRMVM KAQDVMNKGRLEFDSGWTDLAQAFMSIRRAVTQSGKLPTFEASRSDETSHADIAWATM QALLHEPLEGQTGTNSGFMEIY" misc_feature complement(2769204..2770943) /locus_tag="B565_2458" /note="terminase ATPase subunit; Provisional; Region: P; PHA02535" /db_xref="CDD:164931" misc_feature complement(2770761..2770934) /locus_tag="B565_2458" /note="Putative ATPase subunit of terminase (gpP-like); Region: Terminase_5; pfam06056" /db_xref="CDD:114760" misc_feature complement(2769276..2770535) /locus_tag="B565_2458" /note="Mu-like prophage FluMu protein gp28 [General function prediction only]; Region: COG4373" /db_xref="CDD:34082" gene 2771117..2771920 /locus_tag="B565_2459" /db_xref="GeneID:10488376" CDS 2771117..2771920 /locus_tag="B565_2459" /codon_start=1 /transl_table=11 /product="V protein" /protein_id="YP_004393111.1" /db_xref="GI:330830159" /db_xref="GeneID:10488376" /translation="MPKSKFFRVAVEGGTTDGRAITREWIEQMAQRYNQATYGARVNM EHIRGLDPNGLFKMYGDITAAKTEEVTIEGEQRLALFVQIDPTPELIALNKKRQKVYT SIEIHPNLNDKGAYMMGLAVTDSPASLGTEMLQFCSKAAVNPLADRKYHPECLFTEAL ETVIEFDDEQEKGPGLLERISAIFTSHKQQSTADFSEVHQAVEAVAKEVTSLDTDLQT KFNELTARQTETANALADLTTQLERQEDFSHKRQPATGDDGTKPTNTDF" misc_feature 2771123..2771896 /locus_tag="B565_2459" /note="capsid-scaffolding protein; Provisional; Region: O; PHA02529" /db_xref="CDD:164927" misc_feature 2771126..2771914 /locus_tag="B565_2459" /note="Phage capsid scaffolding protein (GPO) serine peptidase; Region: Phage_GPO; pfam05929" /db_xref="CDD:114640" gene 2771933..2772991 /locus_tag="B565_2460" /db_xref="GeneID:10488377" CDS 2771933..2772991 /locus_tag="B565_2460" /codon_start=1 /transl_table=11 /product="phage-related capsid protein" /protein_id="YP_004393112.1" /db_xref="GI:330830160" /db_xref="GeneID:10488377" /translation="MRNDTRQQFEQYTSQLASLNAVSSAMVQFSVEPSIQQKLETKMQ ESVDFLGMINIVPVDELKGEKVGIGINGTIASRTDTSGGKARVPFDPTGLQNTKYECE KTNYDTSIGYAKLDAWAKFKDFQIRIRDAIVKRQGLDRIMIGWNGKLAAKDTDRVQFP MLQDVNIGWIEHTRNDAPAQVMSEGDAGTGHIYIYQPKSEADTKEGDYGNLDALVFDL VNSKIKPWYQDDTDLVVICGRKLLADKYFPILNETRDNQNKLAGQVLVSQKQIGGLLA IRVPFVPEDTLIVTRLDNLSIYWQIGGRRRHLEEQPSLDRIVNWESSNDAYVVEDYDC IAVAENITLGAKPAPAGG" misc_feature 2771933..2772982 /locus_tag="B565_2460" /note="Phage major capsid protein, P2 family; Region: Phage_cap_P2; cl04947" /db_xref="CDD:174828" gene 2773001..2773762 /locus_tag="B565_2461" /db_xref="GeneID:10488378" CDS 2773001..2773762 /locus_tag="B565_2461" /codon_start=1 /transl_table=11 /product="phage P2 small terminase subunit gpM-like protein" /protein_id="YP_004393113.1" /db_xref="GI:330830161" /db_xref="GeneID:10488378" /translation="MTPAQRHTARIMAALQGAANPEQDRAAANQYELQLMQLAEHRRT LKGIQSLERKIDAKRTMLATYTPWIDGLLAADRGGQDDVMVTVMLWHLDTGDLAGALP MADYVIRHGLNTPDQYERTAPTLIAEEVADTAIKLQEAGNGPSLPLLSSYMNMLADCD IFDQVRAKLHKAVGRACYAEGLKEQAADHYRRAIELHDKVGIKRELEDLMREIKKEKA AAGQPANEPAPQPDAKPQSESQPPEQPDPAPGEAS" misc_feature 2773001..2773657 /locus_tag="B565_2461" /note="Phage small terminase subunit; Region: Phage_term_smal; cl05485" /db_xref="CDD:174843" gene 2773871..2774347 /locus_tag="B565_2462" /db_xref="GeneID:10488379" CDS 2773871..2774347 /locus_tag="B565_2462" /codon_start=1 /transl_table=11 /product="phage P2 capsid completion gpL-like protein" /protein_id="YP_004393114.1" /db_xref="GI:330830162" /db_xref="GeneID:10488379" /translation="MSTGFLATNPTPAATEEGDITSAPFWPAISLCALRDTVRLDGTV TTARLTHAVIDAITSVNRDLAQWRSTRESEGHATLAAVPAESINDESTYLHSYRRAVY AMTRANLLERYTDYSATGDGIKGADAKEISSDDLYRDARFAIRDIIGTTHTTVELI" misc_feature 2773928..2774344 /locus_tag="B565_2462" /note="Phage head completion protein (GPL); Region: Phage_GPL; pfam05926" /db_xref="CDD:147853" gene 2774347..2774550 /locus_tag="B565_2463" /db_xref="GeneID:10488380" CDS 2774347..2774550 /locus_tag="B565_2463" /codon_start=1 /transl_table=11 /product="tail protein" /protein_id="YP_004393115.1" /db_xref="GI:330830163" /db_xref="GeneID:10488380" /translation="MQLRSLQGDTLDLILFRHYGYTAGITEQVLNLNPGLAALGPTLP TGTLINMPAAPTQAEQPLIQLWD" misc_feature 2774347..2774517 /locus_tag="B565_2463" /note="Phage Tail Protein X; Region: Phage_tail_X; cl02088" /db_xref="CDD:154736" gene 2774579..2774809 /locus_tag="B565_2464" /db_xref="GeneID:10488381" CDS 2774579..2774809 /locus_tag="B565_2464" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393116.1" /db_xref="GI:330830164" /db_xref="GeneID:10488381" /translation="MSRLDDELERLASISEQQLAARIHAARIAGTGPHYCIDCDDPIP QERREAIRGCERCADCQTIHEFQLARHCGSKR" misc_feature 2774594..2774773 /locus_tag="B565_2464" /note="Prokaryotic dksA/traR C4-type zinc finger; Region: zf-dskA_traR; cl00755" /db_xref="CDD:193930" gene 2774819..2775190 /locus_tag="B565_2465" /db_xref="GeneID:10488382" CDS 2774819..2775190 /locus_tag="B565_2465" /codon_start=1 /transl_table=11 /product="putative phage-related transmembrane protein" /protein_id="YP_004393117.1" /db_xref="GI:330830165" /db_xref="GeneID:10488382" /translation="MPEPISSSAATSTLTGLALLFTLPGVDPSVVLGALTGAVLFISA AEEQGRLRRIALFVASFVSGLLLAGFTCQLLEVLLPASVQVSNAIGSLIASAMMVRLL QLIMRNQDRLLEALFNKRGQP" gene 2775187..2775528 /locus_tag="B565_2466" /db_xref="GeneID:10488383" CDS 2775187..2775528 /locus_tag="B565_2466" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393118.1" /db_xref="GI:330830166" /db_xref="GeneID:10488383" /translation="MIPTTPTGVFIYTALYALICAAIFLRVMLFDRKGGEYRALPAWM AWLLCVLSGSIPLRFLFGGIPVPDPAAFGLALFLLCAVLNTRGSVHHLLPRGKPSSTD HARDIYRRYQP" misc_feature 2775229..2775474 /locus_tag="B565_2466" /note="Protein of unknown function (DUF754); Region: DUF754; pfam05449" /db_xref="CDD:114187" gene 2775525..2776346 /locus_tag="B565_2467" /db_xref="GeneID:10488384" CDS 2775525..2776346 /locus_tag="B565_2467" /codon_start=1 /transl_table=11 /product="Gp28-like protein" /protein_id="YP_004393119.1" /db_xref="GI:330830167" /db_xref="GeneID:10488384" /translation="MSLKKGDTGTAVADLQRRLTAAGYPLAVDGWFGEATEQALIAFQ RDYMIAAIGQAGPRTLAALLGSERGNQLTINHMQAGADLLAVPLATMATVAQVESIGE GFTQAIRPVVLFERHVFYQQLTKHLGKAAADQLAAHYPNLVNPKRGGYAGGAAEWERL QLAISLHKDAAIESASWGMFQIMGYHWQPLGFASASDWQAAMQRSEVEHLTALCRFIQ QDPAMHKALQGRKWADFARRYNGPAFKENDYDTKLAKWFAHFTKVYQGQEVANVA" misc_feature 2775546..2775713 /locus_tag="B565_2467" /note="Putative peptidoglycan binding domain; Region: PG_binding_1; pfam01471" /db_xref="CDD:190001" misc_feature 2775780..2776307 /locus_tag="B565_2467" /note="Protein of unknown function (DUF3380); Region: DUF3380; pfam11860" /db_xref="CDD:152296" gene 2776336..2776809 /locus_tag="B565_2468" /db_xref="GeneID:10488385" CDS 2776336..2776809 /locus_tag="B565_2468" /codon_start=1 /transl_table=11 /product="putative LysB-like protein" /protein_id="YP_004393120.1" /db_xref="GI:330830168" /db_xref="GeneID:10488385" /translation="MWRELLGSPLSWLLLALAVALGGWGWSARSAAEAKGDATTLQTS LKAAEEKTREAERREQLKETAIATLTRELTTQAQAAQQLQGQLDLLAQAAATRADTIK RLKRENAELRAWADRPLPNPVIRLLQRPALTGAADYQAHLSGPEPLPAAAGGATQ" misc_feature <2776636..2776764 /locus_tag="B565_2468" /note="phage lysis regulatory protein, LysB family; Region: phage_LysB; TIGR03495" /db_xref="CDD:132534" gene 2776917..2777387 /locus_tag="B565_2469" /db_xref="GeneID:10488386" CDS 2776917..2777387 /locus_tag="B565_2469" /codon_start=1 /transl_table=11 /product="putative tail completion-like protein" /protein_id="YP_004393121.1" /db_xref="GI:330830169" /db_xref="GeneID:10488386" /translation="MEKPKQIREVLTRCVPHLKTNPDKLHIFIAPGNIESTGARSLSF EWQYPLTIGIEDLAGHPDQIMVPLLAWLRQHQPELMTNDEQRKDGITFEAEYLANDLM DLIITVKLTERVKVWQNEQGIGWEHLPEPPEDPYDGITWELFINGEPQPWPPTT" misc_feature 2776917..2777309 /locus_tag="B565_2469" /note="P2 phage tail completion protein R (GpR); Region: P2_Phage_GpR; pfam06891" /db_xref="CDD:148486" gene 2777369..2777821 /locus_tag="B565_2470" /db_xref="GeneID:10488387" CDS 2777369..2777821 /locus_tag="B565_2470" /codon_start=1 /transl_table=11 /product="phage P2 essential tail completion gpS-like protein" /protein_id="YP_004393122.1" /db_xref="GI:330830170" /db_xref="GeneID:10488387" /translation="MATDDLNRLISWADALLASMTPAARRQLMGDMARNLRASQSKRI RANIQPDGSPMTPRKPLKKLAKKRGATRRKMFQHLVSPRWLKATSTEHQAVVEFVGSA NRLATIHQYGLKDRIKGREISYPARGLLGVTTEEVEQLETLLCAHLIM" misc_feature 2777378..2777749 /locus_tag="B565_2470" /note="Phage virion morphogenesis family; Region: Phage_tail_S; cl02089" /db_xref="CDD:154737" gene 2778258..2778656 /locus_tag="B565_2471" /db_xref="GeneID:10488388" CDS 2778258..2778656 /locus_tag="B565_2471" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393123.1" /db_xref="GI:330830171" /db_xref="GeneID:10488388" /translation="MKIRQNWQQTWLKHYITKKINNLRRSKSTLVVFFLDFLSTLYDK FTIIVIPTLLAVMAALYCIPQGAVQAKKEISQLAEGTLPITTFISSSAWLSDTPHIRI ICNTTHCAYRLKDGKTLILRHDQVEQTYHP" gene 2778783..2779985 /locus_tag="B565_2472" /db_xref="GeneID:10488389" CDS 2778783..2779985 /locus_tag="B565_2472" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393124.1" /db_xref="GI:330830172" /db_xref="GeneID:10488389" /translation="MAFTFIFYIGVQMNFFSEHKNLKILREAHDSLPTVLNSIDETSF QYEMVINFKTMLEAIIANPSFWDEHSSFSIKILGERFISLLGRIFPIKNEFNELFQLA YAMNFRFIYEGFLLSNAEFEPELFEAIAFTKNNVDRFETKPASNITFSTRDLPAYLFK AMMNDPAIKNLKHINATIENAKVLTADWENTLTKKIEKAEALKASIEKYENAFNFVGL YDGFNLLHQQKKKERSNLIGMMVLSILLIMSPLVYKMYSTFKHEQELRLSSLSYELIL NGSSNKPLENKVSKNESPDLVYTITSLFPTISYIAILLYLFRVLLFNYKSVCAQLLQI ELRMTLCRFIMHYSDYAAKIKENSDITLDRFESVIFAGIVSNEGDLPATFDGIDQITA LFKSVKTN" gene 2780081..2780632 /locus_tag="B565_2473" /db_xref="GeneID:10488390" CDS 2780081..2780632 /locus_tag="B565_2473" /codon_start=1 /transl_table=11 /product="phage baseplate assembly-like protein" /protein_id="YP_004393125.1" /db_xref="GI:330830173" /db_xref="GeneID:10488390" /translation="MQPTPTELKRLLDNLIRIGTVTAVRSGECRVKTGDITTNWRPYT TDRAGANRTRHRLSLGEQVILLSVSGDLRNAYIVGRLNADQFPEPLAEDDNPDLDRTE YADGAVIEYNPATGALNAIGIKQATIAASVSVTLDTPKTICTNLLQAKRLICNTAKVG DIEVTEHSHKNVQPGDGTSGGPV" misc_feature 2780102..2780623 /locus_tag="B565_2473" /note="Phage-related baseplate assembly protein; Region: Phage_base_V; cl11432" /db_xref="CDD:164221" gene 2780629..2780988 /locus_tag="B565_2474" /db_xref="GeneID:10488391" CDS 2780629..2780988 /locus_tag="B565_2474" /codon_start=1 /transl_table=11 /product="putative phage-like protein" /protein_id="YP_004393126.1" /db_xref="GI:330830174" /db_xref="GeneID:10488391" /translation="MNWLGMNATNGRAISATDHIIQSVRDILITPVGSRVMRRDYGSE LFYLIDMPQHQATRLRLMAATVQALINWEPRITVTRVDVLGGGMNGALTIELTWRRKD GGVLESATIPIPTGAAQ" misc_feature 2780644..2780940 /locus_tag="B565_2474" /note="Gene 25-like lysozyme; Region: GPW_gp25; cl01403" /db_xref="CDD:194124" gene 2780985..2781866 /locus_tag="B565_2475" /db_xref="GeneID:10488392" CDS 2780985..2781866 /locus_tag="B565_2475" /codon_start=1 /transl_table=11 /product="phage P2 baseplate assembly gpJ-like protein" /protein_id="YP_004393127.1" /db_xref="GI:330830175" /db_xref="GeneID:10488392" /translation="MSNVDLTQLPPPEVEETLDFEAILAKRKATLISYYPADQQAAIA ATLELESEPLNKLLQENAYNEMILRARINDAAKQTLLAFASGTTLDHVAGEYELERLL VTPGDPNATPPIEPVYESDDRLRMRCQMAYEGMATAGPVNAYKFHALSASAEVADVAV DSPTPGTVRVTILSPAGQPSADTLNLVEQALSAEDVRPLCDLVAVEPAQIKPYAIDAT LNAIGLGKEQAIAAAKDAMAKTAAAYYRVGATVPLSAIYAALHQPGIDSVTLRAPLTD VTCSAQQAAKLTSITLD" misc_feature 2780985..2781860 /locus_tag="B565_2475" /note="Baseplate J-like protein; Region: Baseplate_J; cl01294" /db_xref="CDD:174609" gene 2781877..2782278 /locus_tag="B565_2476" /db_xref="GeneID:10488393" CDS 2781877..2782278 /locus_tag="B565_2476" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393128.1" /db_xref="GI:330830176" /db_xref="GeneID:10488393" /translation="MANALYDKGREKFLTGAINASADTLKCALLKSTYSPTLASDEFY SGISAHVVGTPQTLTSKTVAAGVLDAADVTFTAVPTANVNYCAIYKDTGNAATSPLIA LFDTAAGLPVSTNGGDIIIAWDNGPNKIFKL" gene 2782278..2783693 /locus_tag="B565_2477" /db_xref="GeneID:10488394" CDS 2782278..2783693 /locus_tag="B565_2477" /codon_start=1 /transl_table=11 /product="tail fiber protein" /protein_id="YP_004393129.1" /db_xref="GI:330830177" /db_xref="GeneID:10488394" /translation="MATLYPVWCGSLTYHDGTLSHDGAALYRGTVQGPDDPAPEAIAG VSVGLTVAGIEAGQAGMASLIQRAKPTGISQFAAGTNKLTSRARAIAITDGAQGEPAT TIRATVATMGDLLAMGAADMSTQITLVGLDAGMVGMAGVRTRLATGGIRPDAIKAPTI QQRLAPAGFALGVIGSHKAKVRQTIGDLTDGQPGALLLKTKLAQVETACTGAMGTPIA KYAQIIYPMAPALPTATQPALTITLANDGLAPPLVGPFTTITRLASQGVDAGGMGSHK VHRLPLATPATRDLLPPSATRLEHLTAAALAYNLTPEVITSTRFADTCPAPLLPWLAW ARSVDWWELAESEDQQRALIKASFRLHQRKGTPWAIKEALNVLGFGDSTIIERATGRR YDGTLSYNGNEPHGDPTRWAVYRVILTRPVTTEQANRIKRLLAEMAPARCHLSALDYT RAPVTYNGAATYNGNYNHGAS" misc_feature 2783148..2783600 /locus_tag="B565_2477" /note="Phage tail protein (Tail_P2_I); Region: Tail_P2_I; cl01817" /db_xref="CDD:163999" gene 2783695..2784897 /locus_tag="B565_2478" /db_xref="GeneID:10488395" CDS 2783695..2784897 /locus_tag="B565_2478" /codon_start=1 /transl_table=11 /product="putative bacteriophage tail fiber protein" /protein_id="YP_004393130.1" /db_xref="GI:330830178" /db_xref="GeneID:10488395" /translation="MANLQEVVSWEAGIYQLETGDPVLGGPGGISNKQAQALANRTAY LKKHVDDIEGGNTAAGKANKLSTARNIALAGDVTGQAAFDGSGNITITATYKNSGVVA GTYRSVTVDAKGNITAGSNPTTLAGYGITDAVPSAQKGAANGVATLDGSGKVPVNQIP ATAITDTFVVNTQAAMLALTAEVGDIAVRTDLNKSFILRVAGAATLANWQELLTPTDS VQSVDGMTGAVTVATASEAVKGKAQIATQTEVNAGTDDTKFVTAKKLMAWVKQASETV LGMMKVATQAQIDAGTADDVAVTPKKLRAGFSALLAPVGYITFPTWMGGLIIQWGLVS GIAASGTATFTYPLAFQNGAFGAFATSGSSTPANCVPFGVGPGVTTCSVTNGGTNVST AYLLLIGK" misc_feature <2783878..>2784108 /locus_tag="B565_2478" /note="Phage-related tail fibre protein [General function prediction only]; Region: COG5301" /db_xref="CDD:34890" misc_feature <2784346..>2784603 /locus_tag="B565_2478" /note="long tail fiber, proximal subunit; Provisional; Region: 34; PHA02584" /db_xref="CDD:177413" gene 2784907..2785314 /locus_tag="B565_2479" /db_xref="GeneID:10488396" CDS 2784907..2785314 /locus_tag="B565_2479" /codon_start=1 /transl_table=11 /product="putative tail fiber assembly protein" /protein_id="YP_004393131.1" /db_xref="GI:330830179" /db_xref="GeneID:10488396" /translation="MIYCAESTGGFYDTDIHGKDIPVDAMEISKAERARLLAGQSSGK FIAFKDGIPYLVDPVPPSAHEIATAEQSARITTANQQIAIIKPAVDGGYAKTEHTQLL ADWQRYRYELTLVSEQAGWPESPQWPTAPDKII" misc_feature 2784964..2785302 /locus_tag="B565_2479" /note="Caudovirales tail fibre assembly protein; Region: Caudo_TAP; cl05448" /db_xref="CDD:187922" gene 2785509..2786687 /locus_tag="B565_2480" /db_xref="GeneID:10488397" CDS 2785509..2786687 /locus_tag="B565_2480" /codon_start=1 /transl_table=11 /product="putative phage-like protein" /protein_id="YP_004393132.1" /db_xref="GI:330830180" /db_xref="GeneID:10488397" /translation="MALDQFHHGVRVVEATDGTRTIRTVATAVIGMVCTSEDADATYF PLDKPVLIANLPAAIAKAGSEGNLKRSLQTIYDTVNTIVIAVRVAKGADAAALTSNII GTIKPDGSYTGLKALERATPATGVKPRILCVPDNCTLPVSTALAGMAKKLRAFAYVPT IAETVEAALAYRENFSSRELMLVHADWTAWDIAANASIKLDACLKAAAMRALIDKEIG WHKTLSNVGVTGVDGITKNLFWDLQDPDTEVGLLNANEVTALIRSDGFRYWGNRTCSD DPLFAFENYTRTAQILADTMAEAHMWANDKPLHPSLVKDIVEGIKAKGRELVNGGYLL GFDCWYNEELNDKDTLKAGKLRIDYNYTPVPPLEDLGFIQRITDHYLIDFGARVAAAA " misc_feature 2785512..2786672 /locus_tag="B565_2480" /note="Phage tail sheath protein; Region: Phage_sheath_1; cl01389" /db_xref="CDD:194121" gene 2786697..2787215 /locus_tag="B565_2481" /db_xref="GeneID:10488398" CDS 2786697..2787215 /locus_tag="B565_2481" /codon_start=1 /transl_table=11 /product="protein FII" /protein_id="YP_004393133.1" /db_xref="GI:330830181" /db_xref="GeneID:10488398" /translation="MALPRKLKRLNVFLNGENWVGEAEDFTPAKLTRKFEAYRGGGMG GAVNIDMGFDDSALDVSFTFGGYGEPLLRCMGEPKADGTMVRFAGSVQGDDTAEVVPV EIICRGRFKELDRGTLKAGDNSQAKVGMVNTYYKETINGQVIHEIDLINMIEIGPDGV DRMAEHRKALGL" misc_feature 2786697..2787212 /locus_tag="B565_2481" /note="Phage tail tube protein FII; Region: Phage_tube; cl01390" /db_xref="CDD:174624" gene 2787293..2787577 /locus_tag="B565_2482" /db_xref="GeneID:10488399" CDS 2787293..2787577 /locus_tag="B565_2482" /codon_start=1 /transl_table=11 /product="phage P2 GpE-like tail protein" /protein_id="YP_004393134.1" /db_xref="GI:330830182" /db_xref="GeneID:10488399" /translation="MENKTVTLDQAIQRGDTTITEIQLRKPKAGEMRGLNMTDVVQMD VNALTKLLPRITTPMLTEAEIGNMDPADLMQLGSEVSAFLVPKRMAYLIA" misc_feature 2787302..2787559 /locus_tag="B565_2482" /note="Phage tail protein E; Region: Phage_E; pfam06158" /db_xref="CDD:148016" gene 2787714..2790149 /locus_tag="B565_2483" /db_xref="GeneID:10488400" CDS 2787714..2790149 /locus_tag="B565_2483" /codon_start=1 /transl_table=11 /product="phage tail tape measure protein, TP901 family" /protein_id="YP_004393135.1" /db_xref="GI:330830183" /db_xref="GeneID:10488400" /translation="MNPLKLQILLNGIDKLTAPLKAASGQSRITAKDLVDTKKRIKEL EAQSGQIDGYRTLGQQIGATRAQLTQAQRDAQQMAQQFAKVEQPTKAMSRAMEQAKQK VRDLSQQEREMVARHGSLKQAMGEAGINTRQLGQHQRQLKSDLAAANSQLDQQRAKLG QLADQQKRLNQIKANYDKTMSMRGTLAGYGAAGMATGAAAIYKGTNIAGKAMGFDVDM SKVQAITRLSKESRELAALRAQARELGANTAFTAGEAAQGQGFLAMAGFTPKAIRDAM PGVLDIAKAGGVEIAAAADIGSNILTGFKLPANQMTRLGDVMVGTFTRANVDLQMLGE TMKYVGPVAAGLGVDLETASAMAGKLGDAGIQGSMGGTAIRAILGRLASPPKAANDAL AALNVKTADAAGNLRSLPDILDELYKKTSKMGDATRSGYFKAIAGEEAFAALTVLTEQ AGSGKLQELIATLKQTQGEAGKVAKVMADNAIGDLDNLTSAWDDVGIQMMETENGPLR GIIQRVTEIIQVSGDWMRANPELTSTLTRIAAVTAVTAAAGGSLLLIVAGLLGPLAAI KMGLSTLLVYGGPLLAFIKALTMGMVRLGFAMLTTPIGWFIMGIVAIAAGAYLLYKNW DGVTKWFSDLWAQCKAPALAFWELLKELFSWTPIGMLIMHWNEIWAFFDTLPAGAANK GKAIIDGLIGGISAKWESLKNKIKALTDLLPDWMKGGGSVTANVNPSGYLTGNYNTST TAGASGYGPRIVTPVRPVARGNSTTQIHAPISIVQQPGQSGADVAKEVSRELDRRERQ AAASGRASLTDRN" misc_feature 2787714..>2788262 /locus_tag="B565_2483" /note="Phage-related tail protein [Function unknown]; Region: COG5283" /db_xref="CDD:34880" misc_feature 2788353..2789327 /locus_tag="B565_2483" /note="phage tail tape measure protein, TP901 family, core region; Region: tape_meas_TP901; TIGR01760" /db_xref="CDD:188165" gene 2790162..2790653 /locus_tag="B565_2484" /db_xref="GeneID:10488401" CDS 2790162..2790653 /locus_tag="B565_2484" /codon_start=1 /transl_table=11 /product="protein U" /protein_id="YP_004393136.1" /db_xref="GI:330830184" /db_xref="GeneID:10488401" /translation="MMMTLGWFVFMRSTVAPQSQQDEKSWRHPGNNRVGARPSYQYLG PDDELSTLSGVLYPELTGGPVSLDMLNSMGDSGQAFPLIQGDGVMRGSFVIEGISTTR SEFFQDGSARKIEFSIKLKRVDDNDSSLGNTLLGRTAGNLLGRLGVGKLLNTVGGKLG GLL" misc_feature 2790177..2790539 /locus_tag="B565_2484" /note="Phage P2 GpU; Region: Phage_P2_GpU; cl01391" /db_xref="CDD:154376" gene 2790653..2791813 /locus_tag="B565_2485" /db_xref="GeneID:10488402" CDS 2790653..2791813 /locus_tag="B565_2485" /codon_start=1 /transl_table=11 /product="D protein" /protein_id="YP_004393137.1" /db_xref="GI:330830185" /db_xref="GeneID:10488402" /translation="MGAFDQFGTRLAENLGITSQLDALRQQHPAPAYQVLVDGSDISG TLRPRLMHMTITDNRGFSADTIEIALDDSDGKLAMPRRGATLQASIGWQGGPLVDKGT FKIDEVEHGGAPDVLTIRGKSADLRGGMNKLRERSWHFETIGAIVEQLAARYGLTPTV DEAFKGMVIDHIDQTNESDLAFLTRLATEQDAIATVKSGRLMFIKAGNGTTVSGKPLP AISITRQDGDQHQFSVADRDAYTGVIAYWQDNKAAEKKKIEVKSKRKTKPKEERPLPP GVVVNKKENELLVGDSENVKELRHVYANQSNAMRAARAEWEKLQRGVAEFQITLAKGR PELYPEQPTTVRGFKPQIDEADWLLTQVVHDLTDQGYTNRLQLEVKLAELPE" misc_feature 2790734..2791804 /locus_tag="B565_2485" /note="Phage protein D [General function prediction only]; Region: COG3500; cl12180" /db_xref="CDD:175410" misc_feature 2790743..2791792 /locus_tag="B565_2485" /note="Phage late control gene D protein (GPD); Region: Phage_GPD; pfam05954" /db_xref="CDD:147871" gene complement(2792068..2792154) /locus_tag="B565_t060" /db_xref="GeneID:10488403" tRNA complement(2792068..2792154) /locus_tag="B565_t060" /product="tRNA-Leu" /db_xref="GeneID:10488403" gene complement(2792196..2792269) /locus_tag="B565_t061" /db_xref="GeneID:10490045" tRNA complement(2792196..2792269) /locus_tag="B565_t061" /product="tRNA-Cys" /db_xref="GeneID:10490045" gene complement(2792305..2792380) /locus_tag="B565_t062" /db_xref="GeneID:10490046" tRNA complement(2792305..2792380) /locus_tag="B565_t062" /product="tRNA-Gly" /db_xref="GeneID:10490046" gene complement(2792562..2793077) /locus_tag="B565_2486" /db_xref="GeneID:10490047" CDS complement(2792562..2793077) /locus_tag="B565_2486" /codon_start=1 /transl_table=11 /product="CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase" /protein_id="YP_004393138.1" /db_xref="GI:330830186" /db_xref="GeneID:10490047" /translation="MLIPVFVILFYLPYQWSYLAAAIVFILAAATDWFDGYLARKLNQ STAFGAFLDPVADKIMVAAALVVIVEHYNTIWVTIPAMTMIGREIIISALREWMAELG KRSSVAVSWIGKWKTMIQMVSLTGLIWQYNVWMVWLAYVMLYVATVLTFWSMFQYMKA AWGDLTHHANL" misc_feature complement(2792574..2793074) /locus_tag="B565_2486" /note="CDP-alcohol phosphatidyltransferase; Region: CDP-OH_P_transf; cl00453" /db_xref="CDD:193825" gene complement(2793316..2795169) /locus_tag="B565_2487" /db_xref="GeneID:10488404" CDS complement(2793316..2795169) /locus_tag="B565_2487" /codon_start=1 /transl_table=11 /product="UvrABC system protein C" /protein_id="YP_004393139.1" /db_xref="GI:330830187" /db_xref="GeneID:10488404" /translation="MTLSPEPLFDSKAFLSAVTHQSGVYRMYDSGGTVIYVGKAKDLK KRLASYFRTNVDSIKTRTLVRQIADIQVTVTHTETEALILEHNLIKQYQPRYNVLLRD DKSYPWIIITAHQHPRIGVHRGARKVKGEYFGPYPSGGAVRESLHLMQKIFPVRQCED AVYANRTRPCLLYQLKRCAGPCVAGLVSEAEYAQQVELAKLFLAGKNQQVIGELVGKM ESASGDLRFEEAARYRDQILALRRVTEQQSVSGNVLDELDVVGVAFQQGAACIHVLFI RQGKVLGSRSYFPKVPADTQLDEVVQSFLLQFYLSGQGGRQIPSEVLLDVALEDESVI AETLSQTAGYKVRVVSRTRAERARFIKLASINAETALRSRLAHKSTITARYDQLEELL ELERPIARMECFDISHTMGERTVASCVVFNREGPLSSEYRRFNIDGITGGDDYAAMEQ ALERRFGKQQEPDKVPDVLFIDGGLGQLRRAEEILARQLEFLGGKYPLLVGIAKGVTR KAGLETLIMGESHEELHLPADMPALHLIQHIRDESHRFAITGHRARRAKARTSSSLED IPGVGPKRRQALLKYLGGLQEVKKASVDELAKVPGISQELAQTIHDGLHSA" misc_feature complement(2793322..2795136) /locus_tag="B565_2487" /note="excinuclease ABC subunit C; Validated; Region: uvrC; PRK00558" /db_xref="CDD:179065" misc_feature complement(2794864..2795109) /locus_tag="B565_2487" /note="GIY-YIG catalytic domain; Region: GIY-YIG; cl01061" /db_xref="CDD:194023" misc_feature complement(2794444..2794548) /locus_tag="B565_2487" /note="UvrB/uvrC motif; Region: UVR; pfam02151" /db_xref="CDD:145355" misc_feature complement(2793526..2794008) /locus_tag="B565_2487" /note="UvrC Helix-hairpin-helix N-terminal; Region: UvrC_HhH_N; pfam08459" /db_xref="CDD:149497" misc_feature complement(2793325..2793471) /locus_tag="B565_2487" /note="Helix-hairpin-helix motif; Region: HHH_2; pfam12826" /db_xref="CDD:193301" gene complement(2795297..2795941) /locus_tag="B565_2488" /db_xref="GeneID:10488405" CDS complement(2795297..2795941) /locus_tag="B565_2488" /codon_start=1 /transl_table=11 /product="GacA-like protein" /protein_id="YP_004393140.1" /db_xref="GI:330830188" /db_xref="GeneID:10488405" /translation="MINVFLVDDHELVRTGIRRILEDVRGIKVVGEAQSGETAVTFCR QHHPDVILMDMNMPGIGGLEATRKILRIRPDVRIIVLTIHSENPFPTKVMQAGAAGYL TKGAAPDEMIQAIRLVHSGQRYISPEIAQQMALSQFASADENPFKSLSERELQIMMMI TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLGINGDVELTHLAIRYGMLDADTL" misc_feature complement(2795300..2795941) /locus_tag="B565_2488" /note="response regulator; Provisional; Region: PRK09483" /db_xref="CDD:181897" misc_feature complement(2795585..2795929) /locus_tag="B565_2488" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(2795627..2795632,2795639..2795641, 2795696..2795698,2795756..2795758,2795780..2795782, 2795915..2795920)) /locus_tag="B565_2488" /note="active site" /db_xref="CDD:29071" misc_feature complement(2795780..2795782) /locus_tag="B565_2488" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(2795756..2795764,2795768..2795773)) /locus_tag="B565_2488" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(2795624..2795632) /locus_tag="B565_2488" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(2795327..2795497) /locus_tag="B565_2488" /note="C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors...; Region: LuxR_C_like; cd06170" /db_xref="CDD:99777" misc_feature complement(order(2795354..2795356,2795387..2795401, 2795405..2795410,2795414..2795419,2795441..2795449, 2795486..2795494)) /locus_tag="B565_2488" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:99777" misc_feature complement(order(2795327..2795332,2795339..2795341, 2795348..2795356,2795447..2795449,2795453..2795455, 2795459..2795461)) /locus_tag="B565_2488" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:99777" gene complement(2796154..2796903) /locus_tag="B565_2489" /db_xref="GeneID:10488406" CDS complement(2796154..2796903) /locus_tag="B565_2489" /codon_start=1 /transl_table=11 /product="3-deoxy-manno-octulosonate cytidylyltransferase synthetase" /protein_id="YP_004393141.1" /db_xref="GI:330830189" /db_xref="GeneID:10488406" /translation="MSFVVVIPARYASTRLPGKPLADIHGKPMVQHVVEKALQSGADR VIVATDDERVQQALLSTGVEVCMTSPDHQSGTERLAEVCRHYGFAADTIIVNVQGDEP LIPPAIIRQVADNLAAATAPMATLSVPIKDAEEAFNPNAVKVVTDEDGYALYFSRASI PWDRDRFAKSHEQIGDHYQRHIGIYAYRAGFIQRYVDWAPSVLEQIEALEQLRVLWYG EKIHVAQALEAPPVGVDTQADLEKVRAFLAK" misc_feature complement(2796166..2796900) /locus_tag="B565_2489" /note="CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide; Region: CMP-KDO-Synthetase; cd02517" /db_xref="CDD:133010" misc_feature complement(order(2796604..2796606,2796610..2796612, 2796679..2796681,2796760..2796762,2796874..2796882)) /locus_tag="B565_2489" /note="Ligand binding site [chemical binding]; other site" /db_xref="CDD:133010" misc_feature complement(order(2796250..2796261,2796280..2796288, 2796295..2796300,2796391..2796393,2796418..2796438, 2796442..2796447,2796463..2796471,2796487..2796489, 2796538..2796540)) /locus_tag="B565_2489" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:133010" gene complement(2796900..2797088) /locus_tag="B565_2490" /db_xref="GeneID:10488407" CDS complement(2796900..2797088) /locus_tag="B565_2490" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393142.1" /db_xref="GI:330830190" /db_xref="GeneID:10488407" /translation="MALDIKLLDIIACPVCKGKLHYNKAVHELVCRFDKLAYPLEEGI PVLLENRARPLNSDELPS" misc_feature complement(2796903..2797082) /locus_tag="B565_2490" /note="Trm112p-like protein; Region: Trm112p; cl01066" /db_xref="CDD:194025" gene complement(2797212..2798207) /locus_tag="B565_2491" /db_xref="GeneID:10488408" CDS complement(2797212..2798207) /locus_tag="B565_2491" /codon_start=1 /transl_table=11 /product="tetraacyldisaccharide 4'-kinase" /protein_id="YP_004393143.1" /db_xref="GI:330830191" /db_xref="GeneID:10488408" /translation="MLERLWYRKSGWRWLLAPFALLFAIISGTRRYAYRHGWRKGYRA SLPVIVVGNISVGGNGKTPVVVWLVEQLQARGYRPGVVSRGYGGKAPHYPYRLDETST TAQAGDEPVLIARRCGCPVVVAPKRADAVRLLEQSGEVDIIITDDGLQHYALARDIEL VVVDGARRFGNACLLPMGPLREPVTRLKRVDAIICNGGEPGKGEYPMQLVADAPRRVC DDAPLAAPLSGPVDALAGIGHPPRFFATLEGLGYQLDQQAAYGDHHPFDRDELVGRFA SKPLLMTEKDAVKCRPFALANWWYLPVSAELPASLLDALLHKLGAKAKGAAKAQD" misc_feature complement(2797296..2798207) /locus_tag="B565_2491" /note="Tetraacyldisaccharide-1-P 4'-kinase; Region: LpxK; cl03652" /db_xref="CDD:186597" misc_feature complement(2797299..2798207) /locus_tag="B565_2491" /note="Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]; Region: LpxK; COG1663" /db_xref="CDD:31849" gene complement(2798207..2799970) /locus_tag="B565_2492" /db_xref="GeneID:10488409" CDS complement(2798207..2799970) /locus_tag="B565_2492" /codon_start=1 /transl_table=11 /product="lipid A export permease/ATP-binding protein MsbA" /protein_id="YP_004393144.1" /db_xref="GI:330830192" /db_xref="GeneID:10488409" /translation="MQQETSQESWPVFKRLLGYVRDRKLGLVGGIIGMLGYAAVDTTF VYSIKPLIDQGINGNDSTVLKWMPFFVLGIVALRGVANFLSNYCMAWVGNHVVMRLQQ QVFNHMVAMPMSFFDRQNTGHLLSKVTYDASQVSSAASTTLVTLVREGATVVGLLGLM FWHSWQLSVIFLVVGPLVGVIIGLISRRFRQISRHIQQAVGDITTSTEQMLKGHKEVL MFGGQKVEEKRFFQVSNNMRQQTMKMVAADAIGSPVVQMVASIALAAFLYVATIDSVK STLTAGTFTVMITSMMMLLKPLKSLTDVNNQFQRAITACHSLFGLLDTEPEQDTGTRT LERARGEIEFRNVTFTYPTKDTPALHNVSFKVEAGKSVALVGRSGSGKSTIASLLTRF YDIDQGEILLDGINIREYKLSELRKQYALVSQHVHLFNDSVANNIAYAAEDKYSRDQI VQAARIAHADEFVSKMSNGYDTVVGENGASLSGGQRQRVAIARALLRDAPVLLLDEAT SALDTESERHIQAAIDELCKARTSLVIAHRLSTIEKADEILVIDEGHIVERGNHEALM EQRGTYAQLRAIQFGNAGSKA" misc_feature complement(2798225..2799970) /locus_tag="B565_2492" /note="lipid transporter ATP-binding/permease protein; Provisional; Region: PRK11176" /db_xref="CDD:183016" misc_feature complement(2799104..2799829) /locus_tag="B565_2492" /note="ABC transporter transmembrane region; Region: ABC_membrane; cl00549" /db_xref="CDD:193863" misc_feature complement(2798243..2798947) /locus_tag="B565_2492" /note="MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic...; Region: ABCC_MsbA; cd03251" /db_xref="CDD:73010" misc_feature complement(2798822..2798845) /locus_tag="B565_2492" /note="Walker A/P-loop; other site" /db_xref="CDD:73010" misc_feature complement(order(2798360..2798362,2798453..2798458, 2798699..2798701,2798819..2798827,2798831..2798836)) /locus_tag="B565_2492" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73010" misc_feature complement(2798699..2798710) /locus_tag="B565_2492" /note="Q-loop/lid; other site" /db_xref="CDD:73010" misc_feature complement(2798501..2798530) /locus_tag="B565_2492" /note="ABC transporter signature motif; other site" /db_xref="CDD:73010" misc_feature complement(2798453..2798470) /locus_tag="B565_2492" /note="Walker B; other site" /db_xref="CDD:73010" misc_feature complement(2798435..2798446) /locus_tag="B565_2492" /note="D-loop; other site" /db_xref="CDD:73010" misc_feature complement(2798354..2798374) /locus_tag="B565_2492" /note="H-loop/switch region; other site" /db_xref="CDD:73010" gene complement(2800075..2802276) /locus_tag="B565_2493" /db_xref="GeneID:10488410" CDS complement(2800075..2802276) /locus_tag="B565_2493" /codon_start=1 /transl_table=11 /product="DNA internalization-related competence protein ComEC/Rec2" /protein_id="YP_004393145.1" /db_xref="GI:330830193" /db_xref="GeneID:10488410" /translation="MDLRLLSFALGASSSLLWPWLPSLAWGGLLLSLLIPLACCRAWR WLFLLLGILWMQANLAYRLAWLERLGDQTSHMITAQLQSAEPDGDKFVRLLLRVSTLD EQPVAPEPLIRVNAYQALPAMTVGSRITLVTSLKPAHGLANEAGLDGRRLLLGKGITA TGNLRRVIDIQQAPAGWRERWLGAATESWRPLDYAPLLAALTFGEQSGITDAQWELFR GSGLTHIIAISGQHIALVAVLGWWLGRLFGLRGAIITSLLFAAVYSALAGFAVATERA LIMVLVWSVLRWSRREWPAWRIWLWAFVVLTFWDPFALYSAGFWLSFLSVAILLLVGY VHDKPGLWQLQLWLLLGLLPLQLALFEGIAPLAMVINLLAVPLFCIAIIPLALIGVLL APLSTSLAYGLFWLADLGLGWMLTILSWLSDQLQLWWPLPGWWLPLCTLLLLLWFAAQ WRPARWLWLPGALALVLACWPAPARWQLRVLDVGQGLAVLISKGERAILYDTGDRYPG GYNMADAVILPQLSHLGIRVIDRLIISHKDRDHAGNRKRLLSAMPVRHELSSYPFSEG TTLCQRGQQWRWQGLSFAVLWPERPGGGRNNDGCVVRISDGQRSVLLSADIERQAEQR LVALEGKGLASTLLVSPHHGSRTSSTPPFVAAVAAKEVIHSAGFMNQWGFPRPDVVAR YRDARQWITGQQGAMLVEPTAAGLSVTAERDSGPWYRRSGEWWRPRVWFEQ" misc_feature complement(2800192..2802063) /locus_tag="B565_2493" /note="DNA internalization-related competence protein ComEC/Rec2; Region: ComEC_Rec2; TIGR00361" /db_xref="CDD:161839" misc_feature complement(2801026..2801676) /locus_tag="B565_2493" /note="Competence protein; Region: Competence; cl00471" /db_xref="CDD:193833" misc_feature complement(2800126..2800863) /locus_tag="B565_2493" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" gene 2802304..2802822 /locus_tag="B565_2494" /db_xref="GeneID:10488411" CDS 2802304..2802822 /locus_tag="B565_2494" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FlhF" /protein_id="YP_004393146.1" /db_xref="GI:330830194" /db_xref="GeneID:10488411" /translation="MPKRLIKRWMPDQQTLKEHKHLRLFGKLLLDANLWHLNRRSAAG AFAVGLFMAWVPLPCQMLLAAGGAILCRVNLPLSVALVWLSNPFTMPPLLYGAYLVGC QLLGHSAQQIEIEFTWEWLVSVLGTVAPPLLLGSLILALLSSLIGYTLIRTFWRISTV RQWQKRKMARPC" misc_feature 2802364..2802801 /locus_tag="B565_2494" /note="Uncharacterized protein conserved in bacteria (DUF2062); Region: DUF2062; cl01261" /db_xref="CDD:194087" gene 2802816..2803319 /locus_tag="B565_2495" /db_xref="GeneID:10488412" CDS 2802816..2803319 /locus_tag="B565_2495" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393147.1" /db_xref="GI:330830195" /db_xref="GeneID:10488412" /translation="MLSRWFARFKLDPDTLRQQKWFALFGERLLAPALWQGGTRALSG AVAAGIFACWFPIPMHSLIAVGLALAFSLNLPLALLAVWFNNPLTLPFMYLYAYRTGC LVLHKTPEPFHLSWTLHWLEQEAATLVPPFLLGSLLLAVLTALSGGALTALLLQLRKL WQGARQQ" misc_feature 2802876..>2803211 /locus_tag="B565_2495" /note="Uncharacterized protein conserved in bacteria (DUF2062); Region: DUF2062; cl01261" /db_xref="CDD:194087" gene complement(2803426..2804616) /locus_tag="B565_2496" /db_xref="GeneID:10488413" CDS complement(2803426..2804616) /locus_tag="B565_2496" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase" /protein_id="YP_004393148.1" /db_xref="GI:330830196" /db_xref="GeneID:10488413" /translation="MFEKVVAAPADPILGLTEAFRADSRSHKINLGVGIYKDESGATP ILHCVKKAEQKLLTDEKTKNYLGIEGNIEYGRIVQQLLFGQHSALVASGRAKTAQAPG GTGALRIAAEFVVRNGLAKTIWISDPTWANHVSVFQAAGLTVKWYKYYDAATKGLDFA AMQASLAEVQPGELVLLHGCCHNPTGIDPTSDQWRALAKQSAAAGWLPLFDFAYQGFA RGIEEDAEGLRIFAECHDELLVASSFSKNFGLYNERVGAFTLVSATKEIADVAFTQVK TVIRANYSNPPSHGAAVVTAVVSDPALYAEWVEEVAAMRVRIREMRELLVEKLAALGV SQDFSFIREQNGMFSFSGLTKDQVERLKSEFAIYIVGSGRISVAGITRANIDPLCEAI AKVL" misc_feature complement(2803435..2804532) /locus_tag="B565_2496" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature complement(order(2803855..2803857,2803879..2803884, 2803888..2803890,2803975..2803977,2804068..2804070, 2804227..2804229,2804305..2804313)) /locus_tag="B565_2496" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(2803738..2803740,2803747..2803749, 2803855..2803863,2803996..2803998,2804197..2804199, 2804302..2804304)) /locus_tag="B565_2496" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(2803879..2803881) /locus_tag="B565_2496" /note="catalytic residue [active]" /db_xref="CDD:99734" gene complement(2804762..2805703) /locus_tag="B565_2497" /db_xref="GeneID:10488414" CDS complement(2804762..2805703) /locus_tag="B565_2497" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393149.1" /db_xref="GI:330830197" /db_xref="GeneID:10488414" /translation="MIDFSHPEWRALAQQLLSHSPLVIRGRQWQPLVGLLKDNQLLLA HGSYSYELTPAGRRYLTRELMLAEIATAPPEPEEWLHAQGWQLGELVNERVLAALYRK SEVNFTPNEQIDFEDKGIRLCADQLLRLRAAQPFSLFFSGGTLIDAAPWLQALGEVAL PERTLAGLGKILWGEGSIERVITTDSVGAFAEMPLDAGTLLVWTPPSAPLALQQVVAA LPPNVLWSHLTALDPAGVDRLQALAQRLGRPASWWLPRDLAPILSAYAQPLTEARPWE PSRIPKSLLAVCSGLVESNGGLSAEVCALAPAWHAVG" gene complement(2805875..2806747) /locus_tag="B565_2498" /db_xref="GeneID:10488415" CDS complement(2805875..2806747) /locus_tag="B565_2498" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004393150.1" /db_xref="GI:330830198" /db_xref="GeneID:10488415" /translation="MDTELLRTFIEVSKTRHFGRAAENLYLTQSAVSFRIRQLEQQLG VSLFARHRNNIRLTASGERLLPYADAILHTLGRAKQDVALSPGFSQQLAIGAPAVFWE LDFNDWLNHIYALAPGLAVRLETASREHLCRQLLERSLDLALLSEPTKIDEIALHPIG ELVFELVSRDPAANADNLMQMPHIHLDWGTSFEPQPSRLQSLQKTPVLHSSSASMALQ FVLANGGAAYLPRRMVSPFLEKGALHLVEGGQPLSRPLYLAYLEKSDRRELIDQLLTL PLGWHDAELRLNVE" misc_feature complement(2805914..2806747) /locus_tag="B565_2498" /note="transcriptional regulator HdfR; Provisional; Region: PRK03601" /db_xref="CDD:179604" misc_feature complement(2806562..2806738) /locus_tag="B565_2498" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(2805926..2806489) /locus_tag="B565_2498" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(2806747..2807118) /locus_tag="B565_2499" /db_xref="GeneID:10488416" CDS complement(2806747..2807118) /locus_tag="B565_2499" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393151.1" /db_xref="GI:330830199" /db_xref="GeneID:10488416" /translation="MSFESDKRFNDFKHFPRGLRRSGEFTVAEADSLEKYGTAMLALY QGNLAPRDDVESAFVEQVKSGEAGANPHAKVWFKYLKVIGPKRVHRLCTVVGGASEES SGGGSFDVGGGSGGGSDESID" misc_feature complement(2806843..2807118) /locus_tag="B565_2499" /note="Protein of unknown function, DUF; Region: DUF413; cl10479" /db_xref="CDD:187003" gene complement(2807417..2807899) /locus_tag="B565_2500" /db_xref="GeneID:10488417" CDS complement(2807417..2807899) /locus_tag="B565_2500" /codon_start=1 /transl_table=11 /product="Ecotin" /protein_id="YP_004393152.1" /db_xref="GI:330830200" /db_xref="GeneID:10488417" /translation="MKTVLRFSLLGALLLGGHAFAAEPKKFDISMFPAADVNQERVVI RLPEVEKEADMMVELQVGKKMMVDCNVPRFAGNLEQHSVKGWGYNYLKLGKVSDPIST LMMCPDNQQKETFVQIYGQGFFVNYNSKLPFVIYVPQEYEVRYRLWRADNLAQPAMIE " misc_feature complement(2807429..2807815) /locus_tag="B565_2500" /note="Protease Inhibitor Ecotin; homodimeric protease inhibitor; Region: Ecotin; cl00178" /db_xref="CDD:185812" misc_feature complement(order(2807507..2807524,2807633..2807647)) /locus_tag="B565_2500" /note="secondary substrate binding site; other site" /db_xref="CDD:153074" misc_feature complement(2807588..2807599) /locus_tag="B565_2500" /note="primary substrate binding site; other site" /db_xref="CDD:153074" misc_feature complement(2807588..2807593) /locus_tag="B565_2500" /note="inhibition loop; other site" /db_xref="CDD:153074" misc_feature complement(2807429..2807458) /locus_tag="B565_2500" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:153074" gene complement(2808118..2809206) /locus_tag="B565_2501" /db_xref="GeneID:10488418" CDS complement(2808118..2809206) /locus_tag="B565_2501" /codon_start=1 /transl_table=11 /product="glycerophosphoryl diester phosphodiesterase" /protein_id="YP_004393153.1" /db_xref="GI:330830201" /db_xref="GeneID:10488418" /translation="MKKLAVSLIALSLGASLSLPVLAADEGKVVIAHRGASGYLAEHT LESKALAYGMGADYLEQDLVMTKDDQLVVMHDHFLDGITDVAARFPGRARPDGRYYVV DFTLDEVRSLRMTEPFQLVDGKQVPVYPARFPLWKSDFKIHTFQEEIEMIQGLNKSTG KNIGIYPEIKAPWLFRHEGKDISKAVLKVLKEYGYTGKDDKVYLQCFDADELKRINNE LMPAMGMDLKLVQLMAETDWNETMVYDAKGKATPYNYDWMFKPGAMKTIASYAEGIGP WKPMIVTEPGTLGKPVFTGMVKEAHAAGLKVHPYTFRQDEGQIPAYAKDFTDLLNIFL YQADVDGVFSDFPDKAVAVIKAHQEAAK" misc_feature complement(2808163..2809125) /locus_tag="B565_2501" /note="Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins; Region: GDPD_EcGlpQ_like; cd08600" /db_xref="CDD:176542" misc_feature complement(2808160..2809110) /locus_tag="B565_2501" /note="Glycerophosphoryl diester phosphodiesterase family; Region: GDPD; pfam03009" /db_xref="CDD:145909" misc_feature complement(order(2808277..2808279,2808592..2808594, 2808703..2808705,2808982..2808984,2809021..2809023, 2809027..2809029,2809108..2809110)) /locus_tag="B565_2501" /note="active site" /db_xref="CDD:176542" misc_feature complement(order(2808982..2808984,2809108..2809110)) /locus_tag="B565_2501" /note="catalytic site [active]" /db_xref="CDD:176542" misc_feature complement(order(2808703..2808705,2809021..2809023, 2809027..2809029)) /locus_tag="B565_2501" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:176542" gene complement(2809313..2810806) /locus_tag="B565_2502" /db_xref="GeneID:10488419" CDS complement(2809313..2810806) /locus_tag="B565_2502" /codon_start=1 /transl_table=11 /product="Aerobic glycerol-3-phosphate dehydrogenase" /protein_id="YP_004393154.1" /db_xref="GI:330830202" /db_xref="GeneID:10488419" /translation="MNMSEHYDLVVVGGGINGVGIAADAAGRGLKVALFEAQDLASAT SSNSSKLIHGGLRYLEHYEFRLVKEALAEREVLLGMAPHIARPMRFRLPHRPHLRPAW MIRAGLFLYDNLAKRDKLKGSCGVRFLPQDGLTAGINKGFEYSDAWVDDARLVVLNAM MARDKGADVQTRTRCIKAVRGSKHWTLTLEREGGEQFTVTCRGLVNAAGPWVKTFYDE SLHEKSPRGIRLIKGSHMIVPRIHEREEAYILQNEDNRIVFVIPYQQDYSLIGTTDVE HHGSPREAKISEAEITYLCKVVNAHFTRQIAPKDVIWTYAGVRPLCDDESDSPQAVTR DYTLELSGESDGAPLLSVFGGKLTTYRKLAQAACNKLKPWFSQMGDDWTATSRLPGGE FDCSVRELARAFALEFDWLDDRSALRIAEAYGAHARLWLKEDRGIHFGGGLYESEVRY LIEREWACSLDDILWRRSKLGLRLNESEQQMLQIWLDQYHQALRKAS" misc_feature complement(2809319..2810806) /locus_tag="B565_2502" /note="glycerol-3-phosphate dehydrogenase; Reviewed; Region: glpD; PRK12266" /db_xref="CDD:183388" gene complement(2811111..2811869) /locus_tag="B565_2503" /db_xref="GeneID:10488420" CDS complement(2811111..2811869) /locus_tag="B565_2503" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional repressor GlpR" /protein_id="YP_004393155.1" /db_xref="GI:330830203" /db_xref="GeneID:10488420" /translation="MKQTQRHLEILDVLTRQGFVSTDDLVTHFDVSPQTIRRDLNDLA EQNKIRRHHGGASLHSSTVNTAYSARKVMQLKEKERIAREVAANIPDGSSLFIDIGTT TEAIARALLDHRELRIVTNNLNVASILTAKDDFTVIIAGGEIRNRDGGIVGEATRDFI GQFRMDYGVIGISGIDNDGSLLDFDYHEVKIAQAIIAHSRQVFLAADHTKFGRNAMVN LGNLSQIHALFTDQEPPEKLTRLMAQHQIACHIC" misc_feature complement(2811114..2811869) /locus_tag="B565_2503" /note="DNA-binding transcriptional repressor GlpR; Provisional; Region: PRK10906" /db_xref="CDD:182827" misc_feature complement(2811684..2811854) /locus_tag="B565_2503" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(2811177..2811644) /locus_tag="B565_2503" /note="SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to...; Region: SugarP_isomerase; cl00339" /db_xref="CDD:193777" gene complement(2811972..2813330) /locus_tag="B565_2504" /db_xref="GeneID:10488421" CDS complement(2811972..2813330) /locus_tag="B565_2504" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate transporter" /protein_id="YP_004393156.1" /db_xref="GI:330830204" /db_xref="GeneID:10488421" /translation="MLSLFRPAAHIDRLPADKVDPFYKRMRWQVFFGIFFGYAGYYLV RKNFSLAMPYLIEQGFSRGDLGFALSGVSIAYGLSKFLMGNVSDRSNARYFLSAGLLL SAAIMFMMGTMHWATSSIAIMFVLLFLNGWAQGMGWPPCGRTMVHWWSQKERGEVVAV WNVAHNVGGGMIGPLFILGMGWFNDWRSAFYVPAAAAAAIAVIAFFVMRDTPQSVGLP PIEEYKNDYPKDYNESHEQEFSAKEIFVKYVLHNKLLWYIAIANAFVYLIRYGVLDWA PTYLKEAKHFTVDNSSWAYFLYEWAGIPGTLLCGWISDKMFQGRRAPAGILFMVLVTL AVLVYWFNPAGNPTIDMMALVAIGFLIYGPVMLIGLYALELAPKKAAGTAAGFTGLFG YLGGAVAANAMLGYTVDHFGWDGGFMVLTVSCVLSIILLAMTLKHENIAVAAKKAAAH KA" misc_feature complement(2812014..2813330) /locus_tag="B565_2504" /note="sn-glycerol-3-phosphate transporter; Provisional; Region: glpT; PRK11273" /db_xref="CDD:183068" misc_feature complement(<2812755..2813204) /locus_tag="B565_2504" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature complement(order(2812821..2812823,2812842..2812847, 2812854..2812859,2812893..2812895,2812902..2812907, 2812914..2812919,2812926..2812931,2813079..2813084, 2813088..2813093,2813103..2813105,2813112..2813117, 2813124..2813126,2813172..2813177,2813181..2813189, 2813196..2813198)) /locus_tag="B565_2504" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" misc_feature complement(2812032..>2812574) /locus_tag="B565_2504" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" gene 2813820..2814668 /locus_tag="B565_2505" /db_xref="GeneID:10488422" CDS 2813820..2814668 /locus_tag="B565_2505" /codon_start=1 /transl_table=11 /product="glycerol uptake facilitator protein" /protein_id="YP_004393157.1" /db_xref="GI:330830205" /db_xref="GeneID:10488422" /translation="MSIQRPNTLLGECIAEFIGTGLLIFFGVGCVAALVLAGANFGQW EISITWGLGVAIAIYVTGGISGAHLNPAVTLALMTFCGFDKRKVVPYIIAQMAGAFCF AALVYFLYGNLFTQWEVTHNVVRGSVESLGTAGIFSTYPNALLTNMQAFAVELVITAV LMLGIMALGDNNNGAPKGFAAALLIGILIAVIGASLGPLTGFAMNPARDFGPKLFAFF AGWGDVALTGGRDNPYFWVPILGPIVGAQIGTALYVKVLAPCVPGNRVVTTEQATQTA KEEAAA" misc_feature 2813853..2814587 /locus_tag="B565_2505" /note="Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-...; Region: MIP; cd00333" /db_xref="CDD:29423" misc_feature order(2813967..2813969,2814021..2814029,2814420..2814425, 2814432..2814434,2814441..2814443) /locus_tag="B565_2505" /note="amphipathic channel; other site" /db_xref="CDD:29423" misc_feature order(2814027..2814035,2814432..2814440) /locus_tag="B565_2505" /note="Asn-Pro-Ala signature motifs; other site" /db_xref="CDD:29423" gene 2814711..2816225 /locus_tag="B565_2506" /db_xref="GeneID:10488423" CDS 2814711..2816225 /locus_tag="B565_2506" /codon_start=1 /transl_table=11 /product="glycerol 3-phosphotransferase" /protein_id="YP_004393158.1" /db_xref="GI:330830206" /db_xref="GeneID:10488423" /translation="MENIMSAEKKYVVALDQGTTSSRAIVFDQDANIVGTSQREFTQH YPKAGWVEHDPMEIWATQSSVFTEVLAKTGLRSEEIAAIGITNQRETTVVWEKATGKP IYNAIVWQCRRTAAICEELKARGLEEYVRENTGLVLDAYFSGTKVKWILDNVEGAREK AMNGELLFGTIDTWLVWKMTNGEVHVTDPTNASRTMLYNIRELKWDEKMLDELGIPMS MLPEVKPSSEVYGYTTRGGGSRIPIAGIAGDQQSALFGQLCFEKGMAKNTYGTGCFML MNTGTEPVRSSNGLLTTVAIGPKGEVNYALEGAVFMGGATIQWLRDELKIIHDARDTD YFASKVGDTNGVYLVPAFVGLGAPYWDPYARGTMVGLTRGANRNHIIRAALESIAYQS RDVLDAMQQDSGIKLAALKVDGGAVANDFLMQFQADMMHTPVVRPTRIETTAMGAAFL AGLAVGFWKSSDELEDKFSVDREFIPQMDRDDRAKRYSGWQKAVERSRRWAEED" misc_feature 2814732..2816213 /locus_tag="B565_2506" /note="glycerol kinase; Provisional; Region: glpK; PRK00047" /db_xref="CDD:178821" misc_feature 2814741..2815478 /locus_tag="B565_2506" /note="FGGY family of carbohydrate kinases, N-terminal domain; Region: FGGY_N; cl09121" /db_xref="CDD:195797" misc_feature 2815503..2816039 /locus_tag="B565_2506" /note="FGGY family of carbohydrate kinases, C-terminal domain; Region: FGGY_C; pfam02782" /db_xref="CDD:190423" gene 2816450..2818426 /locus_tag="B565_2507" /db_xref="GeneID:10488424" CDS 2816450..2818426 /locus_tag="B565_2507" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="YP_004393159.1" /db_xref="GI:330830207" /db_xref="GeneID:10488424" /translation="MERAIHRFTLHSLWSGLGIRTRILAGVAILMAIAISCITLILEQ ISHSQAQQRVERYELPSSVDRIANQLTAQLIQHLTEAQALASNRFVIDWLTTGMPEQE WPAMERYFQDLQRRIGGNVFIAPRQSNTLINFSGGPTAQKSLSESDPKDGWFFGFLKR SKPYELNLDISDFDKRASLYINTAVTHEGKTLAVAGTSIDMSALSKLISGYRIGKSGQ VYLADMEGDIEIHPEQEVEGAAHHQQSFLDTVKRLIPNAREQVAVEALTLEGQTYLIA VRYIPTLNRLLIGEINSAELEEGLQESRQLIIMVSLAIGGIAMLASAWLAHSISRPIR QAADGMHHITADRDLATRLDFSDESELGMMAHSFNQLIQSLNQSFSRFQQSGSALSAQ SSQSMQQAQALAGEACQQAQSIQELTTVVTTIGDNAEQIASRSEGVNDVTQRIANHML SIEQDVTQSAAQLDTLRSSIGSSSALLDEVVKDSNNITQIMNLIRDVSNQTNLLALNA AIEAARAGDMGRGFAVVADEVRQLAVRTQTATKDVQDLILRLQEGTRQASSSMADSRN LSEEGYNRMNQAREVLVDATSQINQTALEINEISALAQAQNQQMGQARTALDELAMVA EHQREHAQESNAASRELFELAKAIDEQIRQYRIG" misc_feature 2817368..2817580 /locus_tag="B565_2507" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 2817674..2818417 /locus_tag="B565_2507" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 2817878..2818423 /locus_tag="B565_2507" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 2818620..2818853 /locus_tag="B565_2508" /db_xref="GeneID:10488425" CDS 2818620..2818853 /locus_tag="B565_2508" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393160.1" /db_xref="GI:330830208" /db_xref="GeneID:10488425" /translation="MKPTTTQAPVAHVATPKETLTPREGTFLMMVAQLVVLTCIVLAA TIGGLSWQWTLLLAIPPVIGGALLSRVWGKLPR" gene complement(2819025..2819927) /locus_tag="B565_2509" /db_xref="GeneID:10488426" CDS complement(2819025..2819927) /locus_tag="B565_2509" /codon_start=1 /transl_table=11 /product="putative HTH-type transcriptional regulator YafC" /protein_id="YP_004393161.1" /db_xref="GI:330830209" /db_xref="GeneID:10488426" /translation="MKTHSDELTLFVAVVEAGSFRQAAENLGMDNSVVSRGIKRLEEK LSTVLLNRTTRRVSLTEEGSWFYQRAVKILTEMSEAEGHLLMRREQPEGVLRVDAATP FILHRLVPIIGEFRRRYPAIELQLHSSEGFINLMERRVDMAIRIGELTDSSLRALPLG RSRLRLLASPGYLSERGTPRQPADLLSGHELLGFLHPDHLNHWPLLSAEQGDRFAITP SLRASSGETLRQLALAGQGIVCLSDFMTGPDRESGALVEVLARSNSGASRPINAVFYS DAQRDIRLRVWLDFLKEQLGSHTL" misc_feature complement(2819034..2819912) /locus_tag="B565_2509" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature complement(2819739..2819912) /locus_tag="B565_2509" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(2819055..2819657) /locus_tag="B565_2509" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature complement(order(2819226..2819231,2819235..2819240, 2819256..2819273,2819544..2819564,2819568..2819570, 2819580..2819582,2819589..2819594,2819598..2819603)) /locus_tag="B565_2509" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene 2820089..2820523 /locus_tag="B565_2510" /db_xref="GeneID:10488427" CDS 2820089..2820523 /locus_tag="B565_2510" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393162.1" /db_xref="GI:330830210" /db_xref="GeneID:10488427" /translation="MKPDYQGDTLMEFEERLAIAHQLLADSGLKEFHYNPWLFKLLRK LGVPVKPPYYAGWLTNFLCSGLSIAPLWGLIMWTFVWHPEGRDLLSALFNTAMFAGVF GLFTLIGLWLKRRQLGLTPWEQLEHQHISEGTEKKVKAPAAD" gene 2821151..2821447 /locus_tag="B565_2511" /db_xref="GeneID:10488428" CDS 2821151..2821447 /locus_tag="B565_2511" /codon_start=1 /transl_table=11 /product="antibiotic biosynthesis monooxygenase family protein" /protein_id="YP_004393163.1" /db_xref="GI:330830211" /db_xref="GeneID:10488428" /translation="MSSPVIVIAQLEAKPEFAAQFRAALEPLIAATLQEAGCQRYQLH QDLDNPNSWMLYEVWESKAALTAHQGQPHFTEFVAKAEPWFASSTIRRYQPLGA" misc_feature 2821154..2821444 /locus_tag="B565_2511" /note="Antibiotic biosynthesis monooxygenase; Region: ABM; cl10022" /db_xref="CDD:195949" gene 2821513..2822316 /locus_tag="B565_2512" /db_xref="GeneID:10488429" CDS 2821513..2822316 /locus_tag="B565_2512" /codon_start=1 /transl_table=11 /product="2,5-diketo-D-gluconic acid reductase B" /protein_id="YP_004393164.1" /db_xref="GI:330830212" /db_xref="GeneID:10488429" /translation="MINMPPMGLGTFRLKGEPLLATLTNGLELGYRHIDTAQIYDNEA EVGAVLTRSTVARHEIYLTTKVWTSEFGPGKLIPSLEVSLEKLGTDYLDLALIHWPSP KDEVPMAVYLEQLAEAKARGLTREIGVSNFTVAQLKQAIEILGPGAIAHQQIEVHPLL QNRKVVEFCKAQGIAVTAYMPLAYGKVLSEPLLMEIGLRHGVSAAQVSLAWLLAQDMT VIPSSTKRENQAANLAALDITLSSEEMAAIATLDRGEHCANPDFAPAWD" misc_feature 2821516..2822265 /locus_tag="B565_2512" /note="Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance to both health and...; Region: Aldo_ket_red; cd06660" /db_xref="CDD:119408" misc_feature 2821528..2822271 /locus_tag="B565_2512" /note="Aldo/keto reductase family; Region: Aldo_ket_red; pfam00248" /db_xref="CDD:189468" misc_feature order(2821540..2821548,2821615..2821617,2821630..2821632, 2821705..2821707,2821804..2821809,2821900..2821905, 2821969..2821971,2822047..2822064,2822125..2822127, 2822170..2822181,2822194..2822196,2822203..2822208) /locus_tag="B565_2512" /note="active site" /db_xref="CDD:119408" misc_feature order(2821615..2821617,2821630..2821632,2821705..2821707, 2821804..2821806) /locus_tag="B565_2512" /note="catalytic tetrad [active]" /db_xref="CDD:119408" gene complement(2822478..2823485) /locus_tag="B565_2513" /db_xref="GeneID:10488430" CDS complement(2822478..2823485) /locus_tag="B565_2513" /codon_start=1 /transl_table=11 /product="Nonspecific acid phosphatase" /protein_id="YP_004393165.1" /db_xref="GI:330830213" /db_xref="GeneID:10488430" /translation="MTLNRLSSLLLLCGAFAVQAGQSDPLSAWNDTAAKQAITRWVTN ATDQQQATFIPPEKRHVVFDNDGTLWPEAPMTYQLQFAMDEIKRLAPEHPEWKADPIV AAVLNNDLKAVAKSGEKGLAKLVGLSHSGMTTTEFAERVTRWVNSSKDPRFGCHYDQL GYLPMKQLLGYLRDNGFQTWIVSGGGVDFMRVMSEQMYGIPPQQVIGSFTLGEFALTG EGSEIRKTMNGAYFDDSKAKPAAIHLFMGQRPVGAFGNSDGDVPMLQYTSTNPDYHTF GLLVHHTDAKREYAYDSHPPASGKLIDGLAQAKARGWVVVDMKSDWKQVFDPALCQNA P" misc_feature complement(<2822931..2823311) /locus_tag="B565_2513" /note="haloacid dehalogenase-like hydrolase; Region: Hydrolase; pfam00702" /db_xref="CDD:189678" misc_feature complement(2822691..>2823005) /locus_tag="B565_2513" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" gene 2823829..2825007 /locus_tag="B565_2514" /db_xref="GeneID:10488431" CDS 2823829..2825007 /locus_tag="B565_2514" /codon_start=1 /transl_table=11 /product="major facilitator family transporter" /protein_id="YP_004393166.1" /db_xref="GI:330830214" /db_xref="GeneID:10488431" /translation="MPLALFALTLSAFAIGTTEFVIVGLIPTIAEQLNVSLPSAGLLV SLYALGVAIGAPVLTALTGKVPRKWLLVGLMALFTAGNLLAWQAPGYESLIVARILTG LAHGVFFSVGSTIATGLVAKEKAASAIAIMFSGLTVALVTGVPLGTWIGQVFGWRETF LVVSLLGLIAMVGSLLLIPNNLPKGAASTIREQLSVLTKKPLLLVYAKTALGYGGAFT AFTFLAPILQQVSGFSAGAVSLILLVYGVSVAVGNIWGGKLADKMGPLPALKLLFAGL ALVLLALTFTAPHPVLAVLTVLVWGAFAFGNVPGLQVLVVKQAELHTPKAVDVASGLN IAAFNVGIALGSVVGGLVVEHLGLMHTPWIGALIVLLAYGLTHVSERREALRLAACQA " misc_feature 2823871..2824980 /locus_tag="B565_2514" /note="Arabinose efflux permease [Carbohydrate transport and metabolism]; Region: AraJ; COG2814" /db_xref="CDD:32643" misc_feature 2823871..2824794 /locus_tag="B565_2514" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature order(2823883..2823885,2823892..2823900,2823904..2823909, 2823958..2823960,2823967..2823972,2823979..2823981, 2823991..2823996,2824000..2824005,2824141..2824146, 2824153..2824158,2824165..2824170,2824177..2824179, 2824213..2824218,2824225..2824230,2824246..2824248, 2824465..2824467,2824474..2824479,2824486..2824491, 2824498..2824500,2824540..2824542,2824552..2824554, 2824564..2824566,2824573..2824575,2824585..2824587, 2824729..2824731,2824738..2824743,2824750..2824752, 2824762..2824767,2824774..2824776) /locus_tag="B565_2514" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene 2825163..2825834 /locus_tag="B565_2515" /db_xref="GeneID:10488432" CDS 2825163..2825834 /locus_tag="B565_2515" /codon_start=1 /transl_table=11 /product="ribosyldihydronicotinamide dehydrogenase" /protein_id="YP_004393167.1" /db_xref="GI:330830215" /db_xref="GeneID:10488432" /translation="MKVLIVYAHPEPKSFNSTLFCHAIRTLEQAGHTVMTSDLYAMGF DPVSDRRNFTAASDPDFLKLQLEELAATEQGSFAPQLEQEMQKLEAADLLIFQFPLWW FGLPAILKGWVDRVFAMGRVYGQGHIYESGKFRGKRALLSLTTGGPAETYLPDGFNGD IDGVLRPIQRGILQFVGFDVLRPHICYAPVRVSQEEREAWLAQWAERLGQIEQESPIA VGRYQ" misc_feature 2825163..2825786 /locus_tag="B565_2515" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:193819" gene complement(2825949..2826557) /locus_tag="B565_2516" /db_xref="GeneID:10488433" CDS complement(2825949..2826557) /locus_tag="B565_2516" /codon_start=1 /transl_table=11 /product="DoxD-like family protein" /protein_id="YP_004393168.1" /db_xref="GI:330830216" /db_xref="GeneID:10488433" /translation="MNNTLIQWYERAVAQCKRLDFLALLAIRLYLIPVIYVGAHSKVM GFAGTVAWFGAPVSEGGLNLPFPTLLAFLAAGTEVLGCICIALGLFTRIMAIPTIFLM SVASAMVHWKHGWDAIATGSMEATVRLNGFIEWLAANFPGRYNYITELGDPVMLNNGM EFAATYFVMLLVLLVYGGGRYVSLDYWLKRAVTGKAGVQQAA" misc_feature complement(2826126..2826506) /locus_tag="B565_2516" /note="DoxX; Region: DoxX; cl00976" /db_xref="CDD:154119" gene complement(2826554..2827297) /locus_tag="B565_2517" /db_xref="GeneID:10488434" CDS complement(2826554..2827297) /locus_tag="B565_2517" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393169.1" /db_xref="GI:330830217" /db_xref="GeneID:10488434" /translation="MQQQTAWLASRVRLPQDGIASHYARSVRANVESVLESAFPLTHA HWASVDRWQLVEGFVIAHGAEAPEFHHIATEFVRYVQHRHGEGSLNWPRQRLALLEYE WACLCVEIDQGVVPQVISGVEVTPESSLVLNPTLQLLELPFAIRRSGVVPTRQGNHFY GLFRSPEHQVVTQRLREWDVALIQLLQQQPGITQAAFLQQVQQVRSDFDLSEWARHFH RLGLLILPVGERQPGAPLPPFSKHQGEFP" misc_feature complement(2826728..2827297) /locus_tag="B565_2517" /note="Uncharacterized protein conserved in bacteria (DUF2063); Region: DUF2063; cl01262" /db_xref="CDD:154303" gene complement(2827341..2828198) /locus_tag="B565_2518" /db_xref="GeneID:10488435" CDS complement(2827341..2828198) /locus_tag="B565_2518" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393170.1" /db_xref="GI:330830218" /db_xref="GeneID:10488435" /translation="MRPISSRSRGIGLRQEHLDALCAGPVRPGIDFLELAPENWMAIG GVRRAQLHQLAERYPLVAHGLSLSLGDCQPLNRTLLSQIRTFLDEFGIGIYSEHLSFS RDQQGYLYELLPVPRQWENIPYLAERIAQVQEALARPLVLENISYYHGYDHEMPEEDF LAELVARSGCELLLDINNVFVNSRNHGYCPKRMIAGLPGSAIRYFHIAGHLEEADGTL LDTHGKPVCEEVVALARYTVQTHGLRPLLLERDHHLPPLAELEAELARVHGACCEAID SQVREVRYG" misc_feature complement(2827431..2828198) /locus_tag="B565_2518" /note="hypothetical protein; Provisional; Region: PRK05409" /db_xref="CDD:180060" misc_feature complement(2827431..2828171) /locus_tag="B565_2518" /note="Protein of unknown function (DUF692); Region: DUF692; cl01263" /db_xref="CDD:186406" gene complement(2828186..2828515) /locus_tag="B565_2519" /db_xref="GeneID:10488436" CDS complement(2828186..2828515) /locus_tag="B565_2519" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393171.1" /db_xref="GI:330830219" /db_xref="GeneID:10488436" /translation="MSNSSSNKTTGKLTLSIAMTSLIALTPGLALAATPRDAPVKAAP SEQHGGKCAAGKCGTEKRFEKQAIDSDPQGRLVRARDGKCGVAGEGIDGNTSSKGSKM TEGVCGQ" gene complement(2828508..2829467) /locus_tag="B565_2520" /db_xref="GeneID:10488437" CDS complement(2828508..2829467) /locus_tag="B565_2520" /codon_start=1 /transl_table=11 /product="Arylsulfatase" /protein_id="YP_004393172.1" /db_xref="GI:330830220" /db_xref="GeneID:10488437" /translation="MKQRLKAVALAIGCALTVAPACAEPVQLTPLDKTFTLQVLGSGG PISDDLRASSSEVIWWKGKSRILIDAGGGVYLRFGQAGAKLEEVDFIGITHFHTDHVT DLPALLKGAYFFERSDPLDLAGPEAGSAFPSMSGYFDALFNKDKGAYAYLSGFKDGTD GLFPITLHDVPYQNPQPHTVYQQDGLTITALGIPHGDVPCLAYRIESAEGTIVISADQ NGSNPAFVPFAKGADILVMPLAIHEGADSVSASLHAKPSVVAKIAAEVNPKLLVLNHW MGVGLNHKKEAMAIVKQQFHGQIVAARDLSSYPVSSVKESSHE" misc_feature complement(2828553..2829359) /locus_tag="B565_2520" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" gene 2829552..2829761 /locus_tag="B565_2521" /db_xref="GeneID:10488438" CDS 2829552..2829761 /locus_tag="B565_2521" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393173.1" /db_xref="GI:330830221" /db_xref="GeneID:10488438" /translation="MATCERQPPAVAGREPPPSVAVPFVRLPARFQPEQVAQAQQQGE SEAQNPGEVPHSRSLEVSRVDGCRA" gene complement(2829733..2830872) /locus_tag="B565_2522" /db_xref="GeneID:10488439" CDS complement(2829733..2830872) /locus_tag="B565_2522" /codon_start=1 /transl_table=11 /product="cytochrome D ubiquinol oxidase subunit II" /protein_id="YP_004393174.1" /db_xref="GI:330830222" /db_xref="GeneID:10488439" /translation="MDYATLKLIWWALVLFMMVGFIVMDGFDLGIAMLLQVVSKDDDD RRLVINSVGPVWEGNQVWLIAGAGALFAAWPLVYAAAFSGLYIPMVVLLLGLFLRPVG FDYRSKLADPVWRRWWDRALVAGGLIPALILGAAIGLVMEGLPFRFDTALRLHYGAFD FHWGWLLSVLATAITLLLLHGAGFLQAKVTGTPALRARGIAILLAPLVSLCYLLAGWH LVDLQGFQLTGVGTQPFDPNAAISPLMKGVIPHAGGWLRNYFDYPLLWLVPIIGTLAP LVSGIASWLERGRIALLASAIACAAMLCSVAIALFPFVLPSSLDAVSSLTLWDSTSSY KTLAIMFGLVLVLMPVNLGYTGWVYRVVRGKLDRARIKRDSHQLY" misc_feature complement(2829736..2830872) /locus_tag="B565_2522" /note="cytochrome d ubiquinol oxidase subunit 2; Provisional; Region: PRK15003; cl12219" /db_xref="CDD:187194" misc_feature complement(2829784..2830860) /locus_tag="B565_2522" /note="Cytochrome oxidase subunit II; Region: Cyto_ox_2; pfam02322" /db_xref="CDD:190279" gene complement(2830872..2832443) /locus_tag="B565_2523" /db_xref="GeneID:10488440" CDS complement(2830872..2832443) /locus_tag="B565_2523" /codon_start=1 /transl_table=11 /product="cytochrome d ubiquinol oxidase subunit I" /protein_id="YP_004393175.1" /db_xref="GI:330830223" /db_xref="GeneID:10488440" /translation="MINPDDVVSLSRLQFGATALFHFLFVPLTLGLSWILVIAESAYV MTGKVIYQDITRFWGKLFGINFVMGVTTGITMEFQFGTNWAYYSHYVGDIFGTPLAIE GLMAFFLESTLVGLFFFGWDKLSRGKHLLVTMLVALGSNLSALWILIGNGWMQNPVGA EFNLLTQRMELVDIAAVLFNPVAQVKFVHTVAAGYVAASMFVMGVSSWYLLRKTEVQF ALRSFAIASGFGLAAILSVIVLGDESGYRTGEVQKVKLAAIEAEWETEPAPASFTLFG FPDQQAETTHAAIKIPYLMGIIATRSIDEAVTGLKDIKVQNEARIRSGMVAAEALDQI RQGADTPANRARFEQHGKDLGYGMLLTPYASNIAKAGEAEIAKAVDDSIPPVAPLFWG FRVMVGLGVTMLGLMVVSFVQLCRNRLQDSPRLLKTLLWSIPLPWIAIEAGWLVAELG RQPWTISDVLPVSASVSLLQPGQLWFSLIAICSIYTLLLVVELFLLRHVIRKGPAILH TGRYSGEQPELARIA" misc_feature complement(2830884..2832428) /locus_tag="B565_2523" /note="Bacterial Cytochrome Ubiquinol Oxidase; Region: Bac_Ubq_Cox; cl00562" /db_xref="CDD:193871" gene 2832566..2833984 /locus_tag="B565_2524" /db_xref="GeneID:10488441" CDS 2832566..2833984 /locus_tag="B565_2524" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_004393176.1" /db_xref="GI:330830224" /db_xref="GeneID:10488441" /translation="MSLYQQLADRLQSQIDDGIWQPGERIPSIRQSCKTHGLSPMTVL QAYQLLESQGRILARPQSGYYVKAASPQVVQHTPSQTHYSGSVDINDLVFEVLQASKS RDLVPLGMSVADPTLFPHPQLGRALASCMRKLDPFSTVADLPPGNEALRRAIAQRYAS DGVAVNPQEIIITTGAMEALSLSLQVLTEPGDWVVVESPTFYGALQAIERLKLKAVEI PVIPGVGIDLALLEDALTRIPVKACWLMGNVQHPLGHTMPDSHKARLMALLNSHGVPL VEDDVYAEVYFGRERPKPIRHWDQRGDSLLCSSFSKCLAPGFRVGWVVAGPHAERVQR LQLMSTLSTNVPSQLALAEMLRQGGVDAHFRRLRHTLAQRQQQMRAALQRLLPDEVRI SSPDGGYFLWLALPAHFDSRALHAKALGSGFSVAPGALFSSQGQHNHCLRLNSSHPWS EQLEQALFKLAELINRQIAQGT" misc_feature 2832566..2833972 /locus_tag="B565_2524" /note="Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:31361" misc_feature 2832569..2832766 /locus_tag="B565_2524" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature order(2832569..2832571,2832575..2832577,2832644..2832646, 2832650..2832655,2832677..2832691,2832695..2832700, 2832707..2832709,2832737..2832742,2832746..2832757) /locus_tag="B565_2524" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature 2832893..2833951 /locus_tag="B565_2524" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature order(2833088..2833096,2833166..2833168,2833316..2833318, 2833409..2833411,2833490..2833492,2833496..2833501, 2833520..2833522) /locus_tag="B565_2524" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature order(2833097..2833099,2833196..2833198,2833388..2833390, 2833514..2833522,2833604..2833606,2833613..2833615) /locus_tag="B565_2524" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature 2833499..2833501 /locus_tag="B565_2524" /note="catalytic residue [active]" /db_xref="CDD:99734" gene complement(2834036..2835106) /locus_tag="B565_2525" /db_xref="GeneID:10488442" CDS complement(2834036..2835106) /locus_tag="B565_2525" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393177.1" /db_xref="GI:330830225" /db_xref="GeneID:10488442" /translation="MSTSPAELAKYYSVDDLTSATTGGGRLNNLLLSVQKGLPLSIWS QQYLESKGLNALLGFLTGSLSKEEFYRRALLEREQRIVIAKKRQLELEAIKIAEQKAS ALRYEMLQAQYEAERIKRENDPKFIARRINQELRRKFGIESFVEKHHFKQLMKILRTL DAKSRLSELDSIWLKVEGREYQTDEIWHAYHRIEADFYISEYKKTCDPWQAVNASAHL RKCAAAASAVELLSAIPVKDQEHAKLKSAIRTTHGGALRDLGKRTDALKMGAEAHALQ PNNFRPCTLLGALNIEQGNIEEGHNWYLMAEARGAKRDSIEYELRSLLLRMSEDKRHA TIAELLRIAPREYGWLRRPLKR" gene complement(2835350..2835988) /locus_tag="B565_2526" /db_xref="GeneID:10488443" CDS complement(2835350..2835988) /locus_tag="B565_2526" /codon_start=1 /transl_table=11 /product="inner membrane protein YebE" /protein_id="YP_004393178.1" /db_xref="GI:330830226" /db_xref="GeneID:10488443" /translation="MKQMLEQLLGAGKGWLNEGGDKRKGQMQGALAGGALGLLLGNKK VRKYGSKAAAVGGAAALGGLAYKLYQDWQAQQAAPAQPTHPISGLEGNALDARAALLV RAMVAAARADGHIDGAERQKIQEYLTEQGQSDVARWIDAELARPLDPHALAREVTDME LATEVYLASLLAIEVDHFMERGYLDELARALKLDDNLKGSIERQVAQLNAPA" misc_feature complement(2835410..2835652) /locus_tag="B565_2526" /note="tellurium resistance terB-like protein, subgroup 3; Region: terB_like_YebE; cd07178" /db_xref="CDD:143582" misc_feature complement(order(2835449..2835451,2835461..2835463, 2835632..2835634)) /locus_tag="B565_2526" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:143582" gene 2836127..2836594 /locus_tag="B565_2527" /db_xref="GeneID:10488444" CDS 2836127..2836594 /locus_tag="B565_2527" /codon_start=1 /transl_table=11 /product="cytosolic long-chain acyl-CoA thioester hydrolase family protein" /protein_id="YP_004393179.1" /db_xref="GI:330830227" /db_xref="GeneID:10488444" /translation="MPNRELTLQFLAEPSDVNFGGKVHGGMVMKWIDQAGYACAAGWC GGYAVTVYVGGIRFLRPIQIGQLVEVHAQVIHTGTTSMHLAVDVYSRHPTETERHKTT HCIIIFVAMDEQGKPTPVPQWQPVSESDLQLQQYAKKLIALREEIDKEMRQHL" misc_feature 2836127..2836489 /locus_tag="B565_2527" /note="Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain...; Region: BFIT_BACH; cd03442" /db_xref="CDD:48037" gene 2836689..2836844 /locus_tag="B565_2528" /db_xref="GeneID:10488445" CDS 2836689..2836844 /locus_tag="B565_2528" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393180.1" /db_xref="GI:330830228" /db_xref="GeneID:10488445" /translation="MSLETAPPEVKLAVDLIELLETNELAPELVLAALAIVKNDYERK LAEGKDH" misc_feature 2836689..2836829 /locus_tag="B565_2528" /note="Protein of unknown function (DUF2496); Region: DUF2496; cl11670" /db_xref="CDD:187134" gene complement(2836920..2837774) /locus_tag="B565_2529" /db_xref="GeneID:10488446" CDS complement(2836920..2837774) /locus_tag="B565_2529" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_004393181.1" /db_xref="GI:330830229" /db_xref="GeneID:10488446" /translation="MERPMLDPLLLRSFVAIIDTGSFTRAGERVHLTQSTISQQIRRL EQQLGCPLLDRAGRQVVATAEGEKLLGLARRILALLAQAEEQVTEGSVALSLGVPEDF AAGAITPVLAAFARDYPEVRLEVQSGLSHEIWQRFEAGELDLALVKQTRGKGSPLASW REPLVWVDSRDWPARERDPLPLVAFPSEGLYRQQMTEALDGLGRRWRIAYVSASLASL QGAVSAGIGVSLLPKRLMPADQLALTQWPKVAPVELALHAGVSVSEPLTRLSAALIAL CDEVMGPQ" misc_feature complement(2836935..2837759) /locus_tag="B565_2529" /note="Transcriptional regulator [Transcription]; Region: LysR; COG0583" /db_xref="CDD:30928" misc_feature complement(2837574..2837747) /locus_tag="B565_2529" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(<2837058..2837495) /locus_tag="B565_2529" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature complement(order(2837103..2837108,2837112..2837117, 2837133..2837150,2837394..2837414,2837418..2837420, 2837430..2837432,2837439..2837444,2837448..2837453)) /locus_tag="B565_2529" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene 2837940..2839202 /locus_tag="B565_2530" /db_xref="GeneID:10488447" CDS 2837940..2839202 /locus_tag="B565_2530" /codon_start=1 /transl_table=11 /product="Cyanate transport protein CynX" /protein_id="YP_004393182.1" /db_xref="GI:330830230" /db_xref="GeneID:10488447" /translation="MNQRNTDQPAGQTALLVLVILIGLNLRPFLTAIGPLSGEIGRTL SLGMDTLAWLTLLPLWLIGIGVLLTPSLRRRTSARQLLGAALLLLGVGSAMRFDAQSG ALLIASAALCGLGSALVQGVLPALIKQAFAHKVPLVMGIFSACMMGGGALGASLTPRL AASLDWSRALALWSLPVLLALVWLGWKVHLPRATAVAIPHGERRLITLPRSWLLIVCF GIINSGYGIVVAWLAPAYMAQGWSAAQAGELVAWLALAQTASGLGLPLLAARKMDRRP WMGLAIAMQLAGFGGLWLAPASAPILWCMLCGAGLGGSFSLIMVIALDHLPDPRRAGT LSALMQGFGFMLAATGPWVAARLYHLFGDFAAAWQWQLGGLLLMSQLVLRLDPRHYPR VMGLPTASEPAFSAPLPASTAAQSNTPA" misc_feature 2838018..2839115 /locus_tag="B565_2530" /note="putative cyanate transporter; Provisional; Region: cynX; PRK09705" /db_xref="CDD:182038" misc_feature <2838552..2839025 /locus_tag="B565_2530" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" gene complement(2839270..2840286) /locus_tag="B565_2531" /db_xref="GeneID:10488448" CDS complement(2839270..2840286) /locus_tag="B565_2531" /codon_start=1 /transl_table=11 /product="23S rRNA pseudouridine synthase F" /protein_id="YP_004393183.1" /db_xref="GI:330830231" /db_xref="GeneID:10488448" /translation="MLANESMRLNKYISESGICSRREADRFIEQGHVFINGKRAGIGD QVQVGDLVKVNGQVIEPREADSLVLIALNKPVGIVSTTEAGEKDNIVDFVNHSTRVFP IGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPVTDEFVRGMAAGVPIL GTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGFEVTKLERIRIMNVSLKGLPV GEWRDLTDDELIDLFKLIEDSSSEVKPAKGDKPKAAKAPAAQSAKPGQGKKPRRDDDH EIGGRPNVPGPEAFEKKLPVGKGGAGKGAANKGGAGKGAPKGGKPAAGKPRTANTGRQ KKGR" misc_feature complement(2839570..2840274) /locus_tag="B565_2531" /note="16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]; Region: RsuA; COG1187" /db_xref="CDD:31380" misc_feature complement(2840104..2840268) /locus_tag="B565_2531" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cd00165" /db_xref="CDD:29105" misc_feature complement(order(2840146..2840148,2840152..2840160, 2840161..2840172,2840191..2840193,2840197..2840202, 2840209..2840214,2840218..2840223,2840227..2840229, 2840263..2840265)) /locus_tag="B565_2531" /note="RNA binding surface [nucleotide binding]; other site" /db_xref="CDD:29105" misc_feature complement(2839594..2840085) /locus_tag="B565_2531" /note="PseudoU_synth_RluF_like: Pseudouridine synthase, Escherichia coli RluF like. This group is comprised of bacterial proteins similar to Escherichia coli RluF. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to...; Region: PseudoU_synth_RluF; cd02554" /db_xref="CDD:30011" misc_feature complement(order(2839717..2839719,2839966..2839977)) /locus_tag="B565_2531" /note="probable active site [active]" /db_xref="CDD:30011" gene 2840744..2842324 /locus_tag="B565_2532" /db_xref="GeneID:10488449" CDS 2840744..2842324 /locus_tag="B565_2532" /codon_start=1 /transl_table=11 /product="putative lysophospholipase" /protein_id="YP_004393184.1" /db_xref="GI:330830232" /db_xref="GeneID:10488449" /translation="MQAHTRRLVRRALLTLLLLLLTAWAVIAYFAWQAAPLQLWHTVV PPELSADELDSSDWQAYLTREAELFELVATEVVAKTPPEQQLASNRYYQDAPINPARF QQNWNRSYLLRPEGEVKGVAVLLHGLTDSPYSLRHLARRYQQQGFIALGLRIPGHGTV PAGLVDVDWETWLAATRLAVREARLLAPGKRPLHLVGFSNGGALAVKYALDALADPSG TLAKPDRLVLISPMIGVTRFARFAGLKAVPALLPAFANAAWLDTMPEFNPFKYNSFPV NGARQSYRLTHAIQQQVRQLAASGELAAFPPALTFQSVMDYTVSTRSIIADLYHYLPA NGSELVLFDINRSTLFGPLMSSASELALHRLLPNAPGHYRLTVVGNMDPASPATQART LATADQPEQLRPLGIDYPKEIYSLSHVALPFPMDDPLYGMAARPQQREQYGINLGGLA LRGERGVLIVNPGALTRTSSNPFYPYLQQRVMETLTAPPMARSAAVTPASSGQPDAAY QAEVERFLQESDESSAPF" misc_feature 2841062..2841859 /locus_tag="B565_2532" /note="Lysophospholipase [Lipid metabolism]; Region: PldB; COG2267" /db_xref="CDD:32448" gene complement(2842546..2842914) /locus_tag="B565_2533" /db_xref="GeneID:10488450" CDS complement(2842546..2842914) /locus_tag="B565_2533" /codon_start=1 /transl_table=11 /product="Lactoylglutathione lyase family protein" /protein_id="YP_004393185.1" /db_xref="GI:330830233" /db_xref="GeneID:10488450" /translation="MISHIDHLVLTVSDIERAVAFYSSVLNMEAITFGAGRRAVGFGN QKINLQLLGQEPRNRAQVGSGDVCLITRWPLEQVMAQLTCHGVEIVEGPVTKSGACGP IESVYFLDPDQNLIEVSIYP" misc_feature complement(2842552..2842911) /locus_tag="B565_2533" /note="This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases; Region: Glo_EDI_BRP_like_2; cd07253" /db_xref="CDD:176676" misc_feature complement(order(2842552..2842554,2842564..2842566, 2842570..2842572,2842576..2842581,2842588..2842590, 2842615..2842626,2842645..2842647,2842672..2842674, 2842681..2842686,2842699..2842734,2842777..2842791, 2842834..2842839,2842888..2842911)) /locus_tag="B565_2533" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:176676" misc_feature complement(order(2842564..2842566,2842717..2842719, 2842894..2842896)) /locus_tag="B565_2533" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:176676" gene 2843447..2845345 /locus_tag="B565_2534" /db_xref="GeneID:10488451" CDS 2843447..2845345 /locus_tag="B565_2534" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393186.1" /db_xref="GI:330830234" /db_xref="GeneID:10488451" /translation="MTVPELEFLKNEAGEEEGLSDAGIETFRDDPYASCAREAGQNSR DAGLDGKPVRMTFDLKQEDIANIPFHASLARTLNCCSSQAHAEKEKEFFKNACAVMSR DTLPILRISDFNTKGLIGPPEKSGTAFHSLLKSSGVSKKDSETSGGSYGIGKNANFAV SDLQTVMYSTLYVGEDNEHHFAAQGKVKLVSHTDGNNVHRRAIGYWGFSDNFRAITNA SQVPAWMQRSDVGTSIFCVGFRESEDWAERMAFSLVSNFFVAIQNEDMEFEVDSGKIK INSNTLEELLSNDAIEETADRSGHSSELEFARQLYKCLVAETATEEIIDIPNLGKMKV RILMEVGMPRRVGFVRNGMLITDNLRNFGHVLARFNGADFIALVEPNDDSASKVLKKL ENPAHNAFSAERISDPEGRRTTEKAMRKLGEKLRNIIKSYTTIPVQDSLTLDELGELF SYKGTSDTEPDPNSENDPEKYTYSAAHVNTRKNSTYRHNVKDDGQNGRHKARNSTTSN GGSSSQPISKGAEDTDRSDMHTALNLLDVRNRIAPDDKGIAKSRTLYFSSPVTGKIEL ILQATGVNTPESLHPVNANGASINNKKLLLDVKEGTRNSIYVEFDEPYDGPIEIYARK ISSMGETK" gene 2845984..2846169 /locus_tag="B565_2535" /db_xref="GeneID:10488452" CDS 2845984..2846169 /locus_tag="B565_2535" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393187.1" /db_xref="GI:330830235" /db_xref="GeneID:10488452" /translation="MEVLDILRNDSKEYEFQRWYQPFLAKCHAKGIDIESNHSILEAA QCLLEHPISHLGKIAEE" gene 2846173..2846934 /locus_tag="B565_2536" /db_xref="GeneID:10488453" CDS 2846173..2846934 /locus_tag="B565_2536" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393188.1" /db_xref="GI:330830236" /db_xref="GeneID:10488453" /translation="MSYVPLKYLSQSVLDSLGNDISSNRERYISGDFSDLAKENGWEI KSNTVNVDLDALNELNGTKSTAEADIRNSLIVYKSLQGMTPALAREERLWVRLTHVEC LQYSRARWIKNVNDEALDNTVKKHFFARGRTGVRDDNAISRLWWNMHVATIANPESPE SALQLILKTADIRQAIVERPNIASRKHLAQAIVRAMDAIPWLTSSEVIFREFMKEMNR DAGGILFEAISASEADCILRKYASRVKFNLENSEK" gene complement(2847012..2848313) /locus_tag="B565_2537" /db_xref="GeneID:10488454" CDS complement(2847012..2848313) /locus_tag="B565_2537" /codon_start=1 /transl_table=11 /product="Modification methylase" /protein_id="YP_004393189.1" /db_xref="GI:330830237" /db_xref="GeneID:10488454" /translation="MCLEIGSESGNQRLDQAITKALENRNESQPWVLIGGPPCQAYSL AGRSRNKGKSDYKPEEDHRHFLYKEYLRIIQRNRPDIFVMENVKGILSSKINGDFIFH QILRDLANPNAALDVSDDDLRYQIVSLVSDEVFRDGDDPKAIDARKFIIKSEEYGIPQ ARHRVILLGIRDDRILTELPKLSQEEPITVKQVIGDLPVLRSKLSKQEDSYENWVSSV NDQLMELALNAPLGAEHIKPLANKLSAVAETLEASHPGSLRLEKDEKSVFIGNYKLEK WYSDPKLKVWLNHETRGHRIDDLARYGFAACFAEEYGRSPKGHTDFCLPGLAPDHKNW ESGNFSDRFRVQLADAPSTTITSHISKDGHYFIHYDPRQCRSLTVREAARLQTFPDNY FFQGGRTQQYHQVGNAVPPLLANKIAKLVLNIILSKHNHHK" misc_feature complement(<2847732..2848262) /locus_tag="B565_2537" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" misc_feature complement(order(2847822..2847824,2847828..2847830, 2848050..2848055,2848059..2848061,2848125..2848127, 2848167..2848169,2848176..2848187,2848194..2848199, 2848206..2848208)) /locus_tag="B565_2537" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:73191" misc_feature complement(order(2847822..2847824,2847828..2847830, 2848053..2848055,2848059..2848061,2848185..2848187, 2848197..2848199,2848206..2848208)) /locus_tag="B565_2537" /note="substrate interaction site [chemical binding]; other site" /db_xref="CDD:73191" misc_feature complement(2847045..>2847299) /locus_tag="B565_2537" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene 2848670..2849119 /locus_tag="B565_2538" /db_xref="GeneID:10488455" CDS 2848670..2849119 /locus_tag="B565_2538" /codon_start=1 /transl_table=11 /product="DNA mismatch endonuclease Vsr" /protein_id="YP_004393190.1" /db_xref="GI:330830238" /db_xref="GeneID:10488455" /translation="MDVVDTATRSAMMAGIKSKNTRPELTLRRYLHGLGFRFRVHVKE LPGKPDIVLPRYRLCIFVHGCFWHRHPGCRFAATPKSNTEFWLQKFAANTERDELVEK QLHEAGWRVFRIWECGLKNADFQTLGWLPERIRGTTSFLDWPEFETL" misc_feature 2848682..2849020 /locus_tag="B565_2538" /note="Very Short Patch Repair (Vsr) Endonuclease. Endonucleases in DNA repair that recognize damaged DNA and cleave the phosphodiester backbone. Vsr endonucleases have a common endonuclease topology that has been tailored for recognition of TG mismatches; Region: Vsr; cd00221" /db_xref="CDD:29956" misc_feature order(2848694..2848705,2848730..2848735,2848808..2848810, 2848859..2848861,2848946..2848948,2848955..2848957, 2848964..2848966,2849015..2849017) /locus_tag="B565_2538" /note="additional DNA contacts [nucleotide binding]; other site" /db_xref="CDD:29956" misc_feature order(2848706..2848708,2848715..2848717,2848946..2848948) /locus_tag="B565_2538" /note="mismatch recognition site; other site" /db_xref="CDD:29956" misc_feature order(2848739..2848741,2848817..2848819,2848871..2848873, 2848958..2848960) /locus_tag="B565_2538" /note="active site" /db_xref="CDD:29956" misc_feature order(2848862..2848864,2849018..2849020) /locus_tag="B565_2538" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:29956" misc_feature 2848865..2848870 /locus_tag="B565_2538" /note="DNA intercalation site [nucleotide binding]; other site" /db_xref="CDD:29956" gene 2849306..2849887 /locus_tag="B565_2539" /db_xref="GeneID:10488456" CDS 2849306..2849887 /locus_tag="B565_2539" /codon_start=1 /transl_table=11 /product="Na(+)-translocating NADH-quinone reductase subunit E" /protein_id="YP_004393191.1" /db_xref="GI:330830239" /db_xref="GeneID:10488456" /translation="MTEYLLLLIGTVLVNNFVLVKFLGLCPFMGVSGKLETAIGMGLA TTFVMTLASASSYLVEHYILLPLDIAYLRTLAFILVIAVVVQFTEMVVRKSSPTLYRL LGIFLPLITTNCAVLGVALLSINERHDFIQSVIYGFGAATGFSLVLILFAAMRERLVA ADVPAPFRGVSIAMITAGLMSLAFMGFTGLIKI" misc_feature 2849306..2849884 /locus_tag="B565_2539" /note="Rnf-Nqr subunit, membrane protein; Region: Rnf-Nqr; cl00597" /db_xref="CDD:186097" gene 2849890..2850468 /locus_tag="B565_2540" /db_xref="GeneID:10488457" CDS 2849890..2850468 /locus_tag="B565_2540" /codon_start=1 /transl_table=11 /product="putative NADH:ubiquinone oxidoreductase subunit RnfB" /protein_id="YP_004393192.1" /db_xref="GI:330830240" /db_xref="GeneID:10488457" /translation="MIHILFAILVLTLLALAFGIILGFAAVKFHVEADPIVDQLDALL PQTQCGQCGYPGCKPYAEALANGDQINKCVPGGEATMRKIADLMGVEPQPLGGSDEAA VPVKKVAFIHEDQCIGCTKCIQACPVDAIVGATKAMHTVIANECTGCDLCVDPCPTDC IEMIPVPTTVDNWKWDLNNVHVPGKIPVKIVE" misc_feature 2849992..2850378 /locus_tag="B565_2540" /note="ferredoxin; Provisional; Region: PRK08764" /db_xref="CDD:181550" misc_feature 2850016..2850117 /locus_tag="B565_2540" /note="Putative Fe-S cluster; Region: FeS; pfam04060" /db_xref="CDD:112857" misc_feature <2850229..2850396 /locus_tag="B565_2540" /note="RPB11 and RPB3 subunits of RNA polymerase; Region: RNAP_RPB11_RPB3; cl11409" /db_xref="CDD:196219" gene 2850483..2853194 /locus_tag="B565_2541" /db_xref="GeneID:10488458" CDS 2850483..2853194 /locus_tag="B565_2541" /codon_start=1 /transl_table=11 /product="RnfABCDGE type electron transport complex subunit C" /protein_id="YP_004393193.1" /db_xref="GI:330830241" /db_xref="GeneID:10488458" /translation="MHSLLERIKAGTLWDFHGGIHPADNKLQSSQSPVVDAGLPPRLI IPLRQHAGPAGDLLVQVGDKVKKGQPLTRYAKGRVVPVHASTSGTITEIGNHTVAHPS GLGDLCVILTPDGEDEWGERNGKADYWNLERGELLERIQQAGVAGLGGAVFPTHSKLD GRGQLTEILIVNGLECEPYITTDDRLMQQYADEIMDGIRVLKHLLKPKLTLIGVEDNK PEAIEQLTRHATDEDVLVKTVPTKYPSGGAKQTIELLTGRQVPKGGRAVDIGIMVLNV ATVFAIKRAIIDGEPLIERIVTLTGESFKQPGNAWVRLGTPVRWLLQRFELQPEAEQR VIMGGPMMGFTLPHAMVPVVKATNCLLAPTQAELPAPGPEQPCIRCSACADACPATLL PQELYWYSRAKEYDKAEKLNLMDCIECGACAWVCPSEIPLVQYYKIAKDDIREARAEA EKAERAKQRFEAKQARFEREKAAREARHAEAAAQRRQTMTAAGGEDPVAAALARIKAK QDAPITAITATAEGLPDNSAVIAAREARKREAEARRAAKLAESANSETAAAAQSTEAV DPASDPKKAAIAAALARAKAKKAAQAGDSAEPVTAEAVAAPAVDADQQKAEVDPKKAA IAAAIARAKAKKAEASGEPVSAANSATTDADTQSDAPADPKKAAIAAAIARAKAKKLA QQGDSAEGNLTATAGTSETAATQNDAPSAASEAVDPKKAAIAAAIARAKAKKLAQQGE SAGAEGAQSEPTASAQTRDVALAKGEVTTSQSDTAASEAVDPKKAAIAAAIARAKAKK LAQQSASTSAEVESAGTQVESAGTEGERAPAEPMQTDAASSEQPLAVTAAPEASAPAA DAPVDPKKAAIAAAVARAKAKKLAAEAARAAESAAEDAPSADRTTTR" misc_feature 2850501..>2852072 /locus_tag="B565_2541" /note="electron transport complex protein RnfC; Provisional; Region: PRK05035" /db_xref="CDD:179919" misc_feature 2850900..2851334 /locus_tag="B565_2541" /note="Respiratory-chain NADH dehydrogenase 51 Kd subunit; Region: Complex1_51K; pfam01512" /db_xref="CDD:144926" misc_feature 2851368..2851514 /locus_tag="B565_2541" /note="SLBB domain; Region: SLBB; pfam10531" /db_xref="CDD:192616" misc_feature <2851611..>2851799 /locus_tag="B565_2541" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" gene 2853206..2854258 /locus_tag="B565_2542" /db_xref="GeneID:10488459" CDS 2853206..2854258 /locus_tag="B565_2542" /codon_start=1 /transl_table=11 /product="Electron transport complex protein rnfD" /protein_id="YP_004393194.1" /db_xref="GI:330830242" /db_xref="GeneID:10488459" /translation="MFNIATAPFAHNRKQTRTLMLLVILACVPGLLAQTWFFGWGSFI QILLALVTALLCEALVLKLRGRAIKPALMDGSAALTAVLIGLSLPPLLPWWMLVVGTA FAIIVAKHLYGGLGQNLFNPAMVAYVLLLVSFPVQMTSWLPPESVRAYGLGFGDAASV IFTGFSLDGYSMAQLKQGVDGLTMATPLDTLKTGLTQGLTTGEILSGPLFEGWGGIGW SWVNLGYLLGGLFLLQQKVINWRIPTAILGALLAASTIGYLVSPDATATPMFHLFSGA TMLGAFFIATDPVSACTTPRGRLVYGVLIGMLVYIIRRFGGYPDAFAFAVLLANLCVP FIDSLTRPKVYGARRQ" misc_feature 2853206..2854252 /locus_tag="B565_2542" /note="RnfE family; Region: NQR2_RnfD_RnfE; cl00779" /db_xref="CDD:186185" gene 2854412..2855044 /locus_tag="B565_2543" /db_xref="GeneID:10488460" CDS 2854412..2855044 /locus_tag="B565_2543" /codon_start=1 /transl_table=11 /product="RnfABCDGE type electron transport complex subunit G" /protein_id="YP_004393195.1" /db_xref="GI:330830243" /db_xref="GeneID:10488460" /translation="MLKSMRKNGLILAMFALGCTALVVLTNELTKDKIAHQQQLEKQQ TLSVLLPEGSYDNDLVASCKQVTSRKYLGSDQPQALYTASKNGVVTGYALEAIAPDGY SGAIRIVAGFDAKGTITAVRVLAHNETPGLGDKIELKKSDWINSFAGKFLTHDNEPQW AVKKDGGEYDAFTGATITPRAVVKAVKNLLKLQQEQPELLSNAPACPAAN" misc_feature 2854424..2855029 /locus_tag="B565_2543" /note="FMN-binding domain; Region: FMN_bind; cl01081" /db_xref="CDD:194030" gene 2855060..2855821 /locus_tag="B565_2544" /db_xref="GeneID:10488461" CDS 2855060..2855821 /locus_tag="B565_2544" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, Na(+)-translocating subunit D" /protein_id="YP_004393196.1" /db_xref="GI:330830244" /db_xref="GeneID:10488461" /translation="MNQMEQIETGATPIAELESRKGELKELMSQGLWKNNPSLVQVLG LCPTLAVSSTFTNALGLGLATMAVLVCSNLAVSLVRNWVPKDIRIPVYVMIIASLVTS VQLLMNAYTYGLYQALGIFIALIVTNCVIIGRAEAYASKNPPLLAALDGLMMGLGFTL VLLVLGGMREIIGMGTLFDGAELLLGEWAKSLRIELLHADASLLLAILPPGGFIGLGL LIAAKNAINDWRDRKQAATVAHCNVAPARVRATEL" misc_feature 2855126..2855812 /locus_tag="B565_2544" /note="Rnf-Nqr subunit, membrane protein; Region: Rnf-Nqr; cl00597" /db_xref="CDD:186097" gene 2855835..2856476 /locus_tag="B565_2545" /db_xref="GeneID:10488462" CDS 2855835..2856476 /locus_tag="B565_2545" /codon_start=1 /transl_table=11 /product="endonuclease III" /protein_id="YP_004393197.1" /db_xref="GI:330830245" /db_xref="GeneID:10488462" /translation="MNNQKRREILERLRANNPHPTTELNFNSPFELLIAVLLSAQATD VSVNKATDKLYPVANTPQAMLDLGVDGLKEYIKTIGLFNTKAENVIKTCAILLERHGG EVPENREALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVSNRTGFAVGKNVDQVE EKLLKVVPAEFKLDVHHWLILHGRYTCLARKPRCGSCIIEDLCEYKEKVYPES" misc_feature 2855835..2856467 /locus_tag="B565_2545" /note="endonuclease III; Provisional; Region: PRK10702" /db_xref="CDD:182661" misc_feature 2855922..2856383 /locus_tag="B565_2545" /note="endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases; Region: ENDO3c; cd00056" /db_xref="CDD:28938" misc_feature order(2855955..2855963,2855970..2855972,2856087..2856089) /locus_tag="B565_2545" /note="minor groove reading motif; other site" /db_xref="CDD:28938" misc_feature 2856174..2856197 /locus_tag="B565_2545" /note="helix-hairpin-helix signature motif; other site" /db_xref="CDD:28938" misc_feature order(2856204..2856206,2856360..2856362,2856372..2856374) /locus_tag="B565_2545" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:28938" misc_feature 2856246..2856248 /locus_tag="B565_2545" /note="active site" /db_xref="CDD:28938" misc_feature 2856390..2856452 /locus_tag="B565_2545" /note="FES domain; Region: FES; smart00525" /db_xref="CDD:128798" gene 2856551..2856946 /locus_tag="B565_2546" /db_xref="GeneID:10488463" CDS 2856551..2856946 /locus_tag="B565_2546" /codon_start=1 /transl_table=11 /product="Glyoxalase I" /protein_id="YP_004393198.1" /db_xref="GI:330830246" /db_xref="GeneID:10488463" /translation="MLRVGDLQRSIDFYTRVLGMKLLRKSENSEYKYTLAFVGYGDEK DEAVIELTYNWGVSEYELGSAYGHIALEADDIYATCEALRAAGAKITREPGPVKGGTT VIAFVEDPDGYKIELIAKKDAGTGLGDSF" misc_feature 2856551..2856904 /locus_tag="B565_2546" /note="Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione; Region: Glyoxalase_I; cd07233" /db_xref="CDD:176659" misc_feature order(2856551..2856553,2856557..2856559,2856569..2856574, 2856581..2856586,2856593..2856598,2856605..2856607, 2856614..2856616,2856623..2856628,2856656..2856658, 2856668..2856670,2856689..2856691,2856695..2856700, 2856710..2856715,2856743..2856772,2856794..2856796, 2856887..2856889,2856896..2856898) /locus_tag="B565_2546" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:176659" misc_feature order(2856557..2856559,2856632..2856634,2856647..2856649, 2856653..2856655,2856698..2856700,2856704..2856706, 2856710..2856712,2856752..2856754,2856824..2856826, 2856860..2856862,2856866..2856868,2856890..2856892, 2856896..2856898) /locus_tag="B565_2546" /note="active site" /db_xref="CDD:176659" misc_feature order(2856557..2856559,2856632..2856634,2856647..2856649, 2856653..2856655,2856704..2856706,2856710..2856712, 2856824..2856826,2856860..2856862,2856866..2856868, 2856890..2856892) /locus_tag="B565_2546" /note="glutathione binding site [chemical binding]; other site" /db_xref="CDD:176659" misc_feature order(2856698..2856700,2856752..2856754,2856896..2856898) /locus_tag="B565_2546" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:176659" gene complement(2857032..2857865) /locus_tag="B565_2547" /db_xref="GeneID:10488464" CDS complement(2857032..2857865) /locus_tag="B565_2547" /codon_start=1 /transl_table=11 /product="sodium-type flagellar protein MotY" /protein_id="YP_004393199.1" /db_xref="GI:330830247" /db_xref="GeneID:10488464" /translation="MQLQAGVTEFGAGLDQSVWRLTSDTQIECRLEHPIPNWGTGAFV SRAGRKINLDFELKGKRPQAQTQTVSLGIMPPVWRPGIAGREVSQLRFYQQFDGLVEG QTAWTMLDELEGGRMPTFQYRDWYRQNRAVRVSLSSVNFRVKYQAFIDCLSGLLPYSF NDIAFSVLTYDKNSDQLSIPSKRRLAMISEFIKADKGIDVVVIDAYSDSYGGRWPNLK LSEKRADAIKKVFVDLGIDPGKISVEGHGEKQHVASNETEQGRAKNRRVVISMGRNGE I" misc_feature complement(2857059..2857367) /locus_tag="B565_2547" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature complement(order(2857071..2857073,2857083..2857085, 2857209..2857211,2857218..2857223,2857233..2857235, 2857242..2857247,2857347..2857352)) /locus_tag="B565_2547" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene 2858131..2859096 /locus_tag="B565_2548" /db_xref="GeneID:10488465" CDS 2858131..2859096 /locus_tag="B565_2548" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393200.1" /db_xref="GI:330830248" /db_xref="GeneID:10488465" /translation="MHRSCFSLLQMLLPMLLALSASAVKAATQDQEWAQERANAVLSL MTFTVVPDITASNLDIGSGTNQSAALNMTQIGGGATMSEAVPIYLEGAIGFSRYDPQF VVSNGTESRTLPTKWNSLTASGGIGWDIALHEDPRGGHWVLRPIANVSLGTMASDLRI GNWLLERTKGYSLDFLDGGQLNMYGLGGSLMLDYELFSKVQDIDLEVRYSYQHLQSFG GTSTSVSGHAEAENLGLYLRRRAPLFHWTLLDRPVRYVLEGAHTAYLGEQRGLLGFDS LNSIGAGLELDSSKYDIIVTRTRLVARYMFSHNTSGYSIGLAMSF" gene 2859881..2860264 /locus_tag="B565_2549" /db_xref="GeneID:10488466" CDS 2859881..2860264 /locus_tag="B565_2549" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393201.1" /db_xref="GI:330830249" /db_xref="GeneID:10488466" /translation="MNSNFYEASKGRTTLSMVKNGDWGITYFVKNGDSGACQLNDDEN DDDGDDENASSSAYNGSTAQTKVAENACMNAVARKAGVSRSKLTLDYVADSQAGMMID IKGPNDRLWHCLTDARGHISGINQD" gene 2860346..2860735 /locus_tag="B565_2550" /db_xref="GeneID:10488467" CDS 2860346..2860735 /locus_tag="B565_2550" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393202.1" /db_xref="GI:330830250" /db_xref="GeneID:10488467" /translation="MKMKSKQTLLNIALGCLLAVGISGCAVAKTHHGHKTHAQAHAQE GAVQYGDESPWAGNYKAVTDDGRTLAEIHVDTTGETYIDGNQVKPSHSGSDYLKFKQE TITYTLRKSGASWKDSDAGTSGRILFD" gene 2860732..2861856 /locus_tag="B565_2551" /db_xref="GeneID:10488468" CDS 2860732..2861856 /locus_tag="B565_2551" /codon_start=1 /transl_table=11 /product="integrase catalytic subunit" /protein_id="YP_004393203.1" /db_xref="GI:330830251" /db_xref="GeneID:10488468" /translation="MIIPTPTLPDTKPRQGAFLHLQNTISLCMITNEKVARRKLSLLD LAKELNNVSKACKLIGYSRQQFYEIRRNYQTYGAEGLLDKLPGCKGAHPNRVAPEIEQ AILDYSLTRPTHGPLRVAQKLALQGINVSAGGVRGVWQRHDLLSKHDRLLRLEKTHRE QTIELNEEQIRLLERSSPEFRERQIEVHYTGELVAVDTFFVGALKGVGKVYLQTMLDC YSRHAWRQLYTSKLPVTSVHVLNETVLSFFEAHEARVYIILSDNGREFCGRPDHHPYE LFLQLEGIEHRTTKVRRPQSNGFIERLHRTLLDEHFRIKGRTTWYESVEQMQTDLDSY LVHYNTQRPHQDRMMEGQTPYTMFKKGLKLIPKEVRTKVA" misc_feature 2861287..2861661 /locus_tag="B565_2551" /note="Integrase core domain; Region: rve; cl01316" /db_xref="CDD:194099" gene complement(2862080..2863129) /locus_tag="B565_2552" /db_xref="GeneID:10488469" CDS complement(2862080..2863129) /locus_tag="B565_2552" /codon_start=1 /transl_table=11 /product="major adhesin Aha1" /protein_id="YP_004393204.1" /db_xref="GI:330830252" /db_xref="GeneID:10488469" /translation="MKKTILAIAIPALFASAANAAVIYDKDGTTFDVYGRVQANYYGE HDDTDGELVGSSRLGWSGKVALNNTWSGIAKTEWQVAAENSDKGSDGKSSKFDARHIY AGFDGTQYGKIIFGQTDTAFYDVLEPTDIFNEWGDAGNFYDGRQEGQVIYSNTFGGFK GKVSYQTNDDVAVKITDVGQKIKEDAIWGKDVKRKKAYAVAAGYDFDFGLGFNAGYAY SDLQNKVNGQTGKKDEWAVGAHYAINGFYFAGVYTEGEVKNKSLGLKDDGRGYELAAS YNVDAWTFLAGYNFKEGKANAQAAGSTYKDLVDETLLGVQYAFTPKLKAYTEYKIQGI DKQDDEWTVALQYNF" misc_feature complement(2862113..2863045) /locus_tag="B565_2552" /note="Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane. Individual 16-strand anti-parallel beta-barrels form a central pore, and trimerizes thru mainly hydrophobic interactions at the interface...; Region: gram_neg_porins; cd00342" /db_xref="CDD:30071" misc_feature complement(order(2862161..2862163,2862170..2862175, 2862686..2862691,2862695..2862697,2862779..2862787, 2862815..2862829,2862833..2862838,2862881..2862892, 2862896..2862898,2862902..2862910,2862914..2862916, 2862932..2862946,2863007..2863015,2863019..2863021, 2863037..2863039,2863043..2863045)) /locus_tag="B565_2552" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:30071" misc_feature complement(order(2862695..2862697,2862740..2862742, 2862833..2862835,2862959..2862961,2863022..2863024)) /locus_tag="B565_2552" /note="eyelet of channel; other site" /db_xref="CDD:30071" gene 2863525..2865597 /locus_tag="B565_2553" /db_xref="GeneID:10488470" CDS 2863525..2865597 /locus_tag="B565_2553" /codon_start=1 /transl_table=11 /product="putative ATP-dependent helicase DinG" /protein_id="YP_004393205.1" /db_xref="GI:330830253" /db_xref="GeneID:10488470" /translation="MLSTRLKATIRQTYRQISDGLPGFVPRKEQNFLVAEIAKTLTGE YDKQRRILVAEAGTGIGKSLSYAQGAIPVARLTQKKLVISTATVALQEQLIHKDLPFY HRHSELPFRFMLVKGRQRYCCEHLLEQAASGAEMANFELDFGSLSKSKPSDSDKDRYQ ALWQAYINGKWDGDRDNWPEPIPDTCWDRIAADRHTCNKALSHHQHCPFHRARNDMES ADVLVVNHALLLSDLTMGGGIILPPPDECIYVLDEAHHLPTIARDHGAASASVKGSRR WLEKLVQSAGKLARTLNKESLLDPQLKLQDALASIQPDLKAVEQWLSANDRLFGTEPH YRFAEGVLPDPLPMLAENLKESSKKALRALDRMQGAIGEALKDGEIRRKEAEPLLAES GFHLQRLESFCALWEMLGRHVPTGKTPLARWMAKSDDGDIWLHASPIEVGYLLEEWLW SKCLGAVLVSATLTALSSFSYFRHQVGLKEHDGTRYLRLRSPFDYQKAELYLPKMEHE PNSPAFTNELISVLPRILAGKEASLVLFSSYRQMNEVAIGLRAKGLSLLVQGEASRNA LLTLHKQKCDGGQASILFGTGSFSEGLDLPGHYLTNLVITKLPFAVPNSPVEEATAEW VEQRGGNPFLQLTVPEASRKLIQACGRLIRKEADRGRVTILDRRLLTKRYGKGLLDAL PPFTRRIE" misc_feature 2863525..2865594 /locus_tag="B565_2553" /note="ATP-dependent DNA helicase DinG; Provisional; Region: dinG; PRK11747" /db_xref="CDD:183295" misc_feature 2863663..>2863806 /locus_tag="B565_2553" /note="CRISPR/Cas system-associated DinG family helicase Csf4; Region: Csf4_U; cl09250" /db_xref="CDD:187934" misc_feature 2865178..2865537 /locus_tag="B565_2553" /note="CRISPR/Cas system-associated DinG family helicase Csf4; Region: Csf4_U; cl09250" /db_xref="CDD:187934" gene 2865740..2866399 /locus_tag="B565_2554" /db_xref="GeneID:10488471" CDS 2865740..2866399 /locus_tag="B565_2554" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393206.1" /db_xref="GI:330830254" /db_xref="GeneID:10488471" /translation="MKLTVLVPALAGLLCAGSALADAQLEVTTPYVVQLIDGQSINPK LLDKTSTFPLSAGKHQLVVAFEGNYSSRNEIKLVTAEPLVLNFTAADNQQLVLDYKKP RNEAEAKQFVKEQKVALKDKVSGQQVSSEQFVMPKVEGFQLTRDYQQELINMGKAFNQ PKAVAVSSAAVMAAASVPVQVAPSKAQSNPEALTQLQNWYNKADAETRKAFQIWVIQQ Q" misc_feature 2865809..2866381 /locus_tag="B565_2554" /note="Uncharacterized protein conserved in bacteria (DUF2057); Region: DUF2057; cl11437" /db_xref="CDD:187040" gene 2866581..2867477 /locus_tag="B565_2555" /db_xref="GeneID:10488472" CDS 2866581..2867477 /locus_tag="B565_2555" /codon_start=1 /transl_table=11 /product="histone deacetylase/AcuC/AphA family protein" /protein_id="YP_004393207.1" /db_xref="GI:330830255" /db_xref="GeneID:10488472" /translation="MSLRIFYHPLYSSLTLPERHRFPLAKYQGLFERLQVQGYPLGEA PAATCEQICRIHDADYVAAALSGQLEDRAIRKIGFPWSPMLTERTLRSVGATVAASRH ALEQGCGLQISGGYHHAHRDHGSGFCLFNDLVIAAQACLDEGRCEQVLIVDLDVHQGD GSAALCAGRRDIITLSLHGEHNFPHHKATSHLDFPLPSGMTDDAYLTTLQQALSLALR LYSPDLILYQAGVDVHHADELGYLSLSDEGVRLRDAMVFDCAVQHGVPIAAVPGGGYR RDWQQLIPLHMSLFEIARHRFG" misc_feature 2866602..2867414 /locus_tag="B565_2555" /note="Histone deacetylase domain; Region: Hist_deacetyl; cl02986" /db_xref="CDD:194501" gene complement(2867635..2868558) /locus_tag="B565_2556" /db_xref="GeneID:10488473" CDS complement(2867635..2868558) /locus_tag="B565_2556" /codon_start=1 /transl_table=11 /product="GTP-binding protein" /protein_id="YP_004393208.1" /db_xref="GI:330830256" /db_xref="GeneID:10488473" /translation="MHKARKEIAEVMPQVDVIIEMLDARIPFSSENPLVPELRGDTPV IKVLNKADLADPAITDLWVAHMEKEKGIKALPLTQQEPEKIKQLLTLCHEMLPERNFE LRGVRAMIMGIPNVGKSTLINTLAGRIIARTGNEAGVTKSQQRIKLDNNVILTDTPGF LWPKLNPPSCGYRLAITAAIKDTVFDYADIAMFAADYFIKAYPERIKARYQIDELPET EIELLEMIARQRAFMRKGGLADLHKASEILINEFRSGLLGRISLETPEMVSVEIVEAA AEAEQKAKEKAEREEERQARARRKYARKRQK" misc_feature complement(2867746..2868558) /locus_tag="B565_2556" /note="GTPase YlqF; Reviewed; Region: rbgA; PRK09563" /db_xref="CDD:181957" misc_feature complement(2868076..2868558) /locus_tag="B565_2556" /note="YlqF. Proteins of the YlqF family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases...; Region: YlqF; cd01856" /db_xref="CDD:57927" misc_feature complement(order(2868082..2868084,2868199..2868219, 2868319..2868327,2868400..2868405,2868409..2868414)) /locus_tag="B565_2556" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:57927" misc_feature complement(2868403..2868414) /locus_tag="B565_2556" /note="G4 box; other site" /db_xref="CDD:57927" misc_feature complement(2868319..2868327) /locus_tag="B565_2556" /note="G5 box; other site" /db_xref="CDD:57927" misc_feature complement(2868202..2868225) /locus_tag="B565_2556" /note="G1 box; other site" /db_xref="CDD:57927" misc_feature complement(2868127..2868150) /locus_tag="B565_2556" /note="Switch I region; other site" /db_xref="CDD:57927" misc_feature complement(2868139..2868141) /locus_tag="B565_2556" /note="G2 box; other site" /db_xref="CDD:57927" misc_feature complement(2868082..2868093) /locus_tag="B565_2556" /note="G3 box; other site" /db_xref="CDD:57927" misc_feature complement(2868079..2868087) /locus_tag="B565_2556" /note="Switch II region; other site" /db_xref="CDD:57927" gene 2868909..2870306 /locus_tag="B565_2557" /db_xref="GeneID:10488474" CDS 2868909..2870306 /locus_tag="B565_2557" /codon_start=1 /transl_table=11 /product="alkaline phosphatase" /protein_id="YP_004393209.1" /db_xref="GI:330830257" /db_xref="GeneID:10488474" /translation="MRKMAGLAVMIGAALAAGCKSDNDTVATKPAAQPTNVIFFLGDG MGLNTLTAARIYGVGEEGDLTIDTLPETAFIKTFSHDAQVTDSAPSMAAYMTGVKSNN GVISMDGDATYESDCSKSAGKPVTTLLELAKADGRGTGVVTSTRVTHATPAATYAHIC NRDLEADIAVQLVPGGKGYNSALKEGLDVVLGGGSSFFLPKADKGKREDGRNLISEMQ AKGYQFASNLDELNKADAGKPLLGLFGSSHMKYDLDRPASEPSLAQMTLAAIKQLKGK EKGYFLMVEGGRIDHALHDTNAKRALQDTIAFDNAIKAAIDEVKKSDPELKNTLIVVT ADHDHTLVLNGYAKRTGKTTADNPGVLGLVRNYETGEPSKDSEGMPYTIIGFGNGYNR VDGPRSSVAPLDDATVSANDYHQEVVVKVGEIGNETHGGTDVFLGAIGKGADSFHGSL DNTAVFGKIKAAAKL" misc_feature 2868999..2870303 /locus_tag="B565_2557" /note="Alkaline phosphatase homologues; alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH...; Region: alkPPc; cd00016" /db_xref="CDD:73179" misc_feature order(2868999..2869001,2869047..2869052,2869059..2869061, 2869068..2869073,2869107..2869109,2869116..2869118, 2869122..2869130,2869134..2869136,2869140..2869142, 2869146..2869148,2869158..2869160,2869197..2869205, 2869233..2869235,2869281..2869283,2869926..2869928, 2869932..2869943,2870049..2870054,2870067..2870072, 2870190..2870192,2870196..2870207,2870211..2870213, 2870250..2870261,2870265..2870270,2870277..2870279) /locus_tag="B565_2557" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73179" misc_feature 2869014..2870303 /locus_tag="B565_2557" /note="Alkaline phosphatase homologues; Region: alkPPc; smart00098" /db_xref="CDD:128409" misc_feature order(2869035..2869037,2869164..2869169,2869353..2869355, 2869359..2869361,2869392..2869394,2869761..2869763, 2869776..2869781,2869788..2869790,2869914..2869919, 2870193..2870195) /locus_tag="B565_2557" /note="active site" /db_xref="CDD:73179" gene 2870318..2871706 /locus_tag="B565_2558" /db_xref="GeneID:10488475" CDS 2870318..2871706 /locus_tag="B565_2558" /codon_start=1 /transl_table=11 /product="alkaline phosphatase" /protein_id="YP_004393210.1" /db_xref="GI:330830258" /db_xref="GeneID:10488475" /translation="MSKQMKSIKHTLVCAALFSALGATSQAQAGDAKNVILFIGDGMG PTVLTATRLFKVGEEGNLEMMKLPRSARIKTFSNDAQTTDSAPSMAAYTTGVKMNNEV IAMSSDTKAVAPGKDVNGNKTVNNCSSDNGKPVPTILELAKAAGKSVGAVTTTELTHA TPAATYAHICHRDAAYDIAAQAVPGGAGFNQALGDGVDVLMGGGANHWTPYSASNKGG RNDNRDLTAEMKAQGYSYVTTQSELAKVTSGKVLGLFSSKSHLDYELDRVAKGAANTQ PSLSEMTAKAIDLLSKNSQGYFLMVEGGRIDHALHGTNAKRSLTDAVALDEAVKTALG KVDLNNTLIVVTADHDHTMTINGYSAKGNPVLDLVKNSDGSTQNDVDGKPFTTLVFGN GPNRAAVRPVLTSDQVMANDYLQETGVKLTSETHGGGDVMLFADGAGSNRFKGTLDNT KVFGKLREALGL" misc_feature 2870396..2871703 /locus_tag="B565_2558" /note="Alkaline phosphatase homologues; alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH...; Region: alkPPc; cd00016" /db_xref="CDD:73179" misc_feature order(2870396..2870404,2870450..2870455,2870462..2870464, 2870471..2870476,2870510..2870512,2870519..2870521, 2870525..2870533,2870537..2870539,2870543..2870545, 2870549..2870551,2870561..2870563,2870600..2870608, 2870636..2870638,2870720..2870722,2871371..2871373, 2871377..2871388,2871470..2871475,2871488..2871493, 2871590..2871592,2871596..2871607,2871611..2871613, 2871650..2871661,2871665..2871670,2871677..2871679) /locus_tag="B565_2558" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73179" misc_feature 2870414..2871703 /locus_tag="B565_2558" /note="Alkaline phosphatase homologues; Region: alkPPc; smart00098" /db_xref="CDD:128409" misc_feature order(2870438..2870440,2870567..2870572,2870792..2870794, 2870798..2870800,2870831..2870833,2871221..2871223, 2871236..2871241,2871248..2871250,2871359..2871364, 2871593..2871595) /locus_tag="B565_2558" /note="active site" /db_xref="CDD:73179" gene 2871791..2872465 /locus_tag="B565_2559" /db_xref="GeneID:10488476" CDS 2871791..2872465 /locus_tag="B565_2559" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393211.1" /db_xref="GI:330830259" /db_xref="GeneID:10488476" /translation="MLSLWLLGSTLAFPLHADDTPPDLAARISYHDRNTGSDGIARES VWQEKWLRVGNQVWSQRLIPLPLARAYHATHDATPGHKHFTHQMAARWVSRSDEGELQ LRYADSWHNQLVEVPVEEYGQVAFKPDWPRIRHLVNPTLIEGMTPLDEAAPEQARWYE KREGQQRTRILWSSQWQIPLVVESASLDGYRSYRMEVTLRKLPAQLPWQQLADYEVRD LRDFFD" gene 2872548..2873285 /locus_tag="B565_2560" /db_xref="GeneID:10488477" CDS 2872548..2873285 /locus_tag="B565_2560" /codon_start=1 /transl_table=11 /product="family 3 extracellular solute-binding protein" /protein_id="YP_004393212.1" /db_xref="GI:330830260" /db_xref="GeneID:10488477" /translation="MRALCLPFFALLLLLVHTGAQAIVLVAAELPPYVIRSSHGKPSG VAIEIMEEAARRLKEPLTIELMPLPRALTQTIHRPDVLMIPPVRSSQREHLYQWVTPI LDEQFLIVSDRRFHPKALKSSDLKNLDVGVLRYSFGQHLLKQRIGIRGETVADEQLNA HKLHRGRIDAWVAAWNVILYAQQQDKRSSQQLVRGEVLMNTQLFLAAHKDFPFKQAQR WQAVIDEMRHDGTLARIIRQYNYQAPE" misc_feature 2872614..2873264 /locus_tag="B565_2560" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature 2872614..2873264 /locus_tag="B565_2560" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature order(2872635..2872637,2872749..2872751,2872821..2872823, 2873070..2873072) /locus_tag="B565_2560" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(2873016..2873018,2873028..2873030,2873046..2873048) /locus_tag="B565_2560" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 2873145..2873159 /locus_tag="B565_2560" /note="hinge residues; other site" /db_xref="CDD:29040" gene 2873531..2873926 /locus_tag="B565_2561" /db_xref="GeneID:10488478" CDS 2873531..2873926 /locus_tag="B565_2561" /codon_start=1 /transl_table=11 /product="transcription elongation factor GreA/GreB" /protein_id="YP_004393213.1" /db_xref="GI:330830261" /db_xref="GeneID:10488478" /translation="MKQPHLVISSLDLDRIEQLLGTHPQHLALQEELDRAEIREPADM PPDVVTMNSKVRFKMQSSGNEFCLTLVYPRDAKGDESNISVLAPVGSALLGLKVGDSI AWPGPAGRTIEVEILEVVYQPERAGELHR" misc_feature 2873531..2873923 /locus_tag="B565_2561" /note="nucleoside diphosphate kinase regulator; Provisional; Region: PRK05753" /db_xref="CDD:180236" misc_feature 2873660..2873893 /locus_tag="B565_2561" /note="C-term; Region: GreA_GreB; pfam01272" /db_xref="CDD:189919" gene 2874120..2874710 /locus_tag="B565_2562" /db_xref="GeneID:10488479" CDS 2874120..2874710 /locus_tag="B565_2562" /codon_start=1 /transl_table=11 /product="response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain" /protein_id="YP_004393214.1" /db_xref="GI:330830262" /db_xref="GeneID:10488479" /translation="MIKIALIDDHQIVRSGFAQLLNLEPDLQVVAEFGSASDALAGLP GSGARVCVCDISMPDQSGLDLLKQLPSGLAVVMLSVHDSPALIEQALQTGAKGFLSKR CSPDELIAAVRTAAQGGCYLTPDIAQKLASSSRDPLTNREREIAQLLAQGLEVKAIAE QLGLSPKTVHVHRANLMDKLKVSNNVELAHRMLDSW" misc_feature 2874120..2874707 /locus_tag="B565_2562" /note="DNA-binding transcriptional activator UhpA; Provisional; Region: PRK10360" /db_xref="CDD:182408" misc_feature 2874135..2874467 /locus_tag="B565_2562" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(2874141..2874146,2874279..2874281,2874303..2874305, 2874354..2874356,2874411..2874413,2874420..2874425) /locus_tag="B565_2562" /note="active site" /db_xref="CDD:29071" misc_feature 2874279..2874281 /locus_tag="B565_2562" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(2874288..2874293,2874297..2874305) /locus_tag="B565_2562" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 2874420..2874428 /locus_tag="B565_2562" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 2874531..2874701 /locus_tag="B565_2562" /note="C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors...; Region: LuxR_C_like; cd06170" /db_xref="CDD:99777" misc_feature order(2874534..2874542,2874579..2874587,2874609..2874614, 2874618..2874623,2874627..2874641,2874672..2874674) /locus_tag="B565_2562" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:99777" misc_feature order(2874567..2874569,2874573..2874575,2874579..2874581, 2874672..2874680,2874687..2874689,2874696..2874701) /locus_tag="B565_2562" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:99777" gene 2874707..2876227 /locus_tag="B565_2563" /db_xref="GeneID:10488480" CDS 2874707..2876227 /locus_tag="B565_2563" /codon_start=1 /transl_table=11 /product="signal transduction histidine kinase, glucose-6-phosphate specific" /protein_id="YP_004393215.1" /db_xref="GI:330830263" /db_xref="GeneID:10488480" /translation="MISRFASYVAIALAACFIFAAGWFCLWSISLHLAGGPALAVLLF PFGLRLGLLLQSPGHYWPPLLLCEGLLLYWLNLEVGLPHWPWLVAGSLLTLLPLLIAR RQQVRNDWQQLLLLLATVTAAALLQALLWHLAGEDGLSALLLSLTGGLTLTSTCMLIW HYLTRATWVPLGPALVDQPVEWRFRHLVWYLLLFVLSLWLQLGLPNSLVRFTPFCLAI PIIAMAWRYGWQGALLATLMNTIALLASQAWHDHPLDLLLSLLAQSLTGLLLGAGIQR QRELNQALTRQLAHNRQLTERLLETEESIRKEVARELHDDIGQTITAIRTQAGIVRRL APDNAGVGQSSALIDTLSLGIYDAVRGLLGRLRPRQLDDMTLEQAVRALLRELELERH GIVTRLEWQLADRDLSDAQRVTLFRVCQEGLNNVVKHANAHSVTIRARACGEQLQLVL EDDGRGLPESRPQQGYGLLGIRERVQALGGSLQLSCIHGTQLTVNLPSRRREESHG" misc_feature 2874719..2876203 /locus_tag="B565_2563" /note="sensory histidine kinase UhpB; Provisional; Region: PRK11644" /db_xref="CDD:183254" misc_feature <2875172..2875465 /locus_tag="B565_2563" /note="MASE1; Region: MASE1; pfam05231" /db_xref="CDD:113982" misc_feature 2875622..>2875735 /locus_tag="B565_2563" /note="Histidine kinase; Region: HisKA_3; pfam07730" /db_xref="CDD:191831" misc_feature 2875949..2876194 /locus_tag="B565_2563" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(2875967..2875969,2875979..2875981,2875988..2875990, 2876054..2876056,2876060..2876062,2876066..2876068, 2876072..2876077,2876099..2876110,2876156..2876158, 2876162..2876164,2876171..2876176,2876180..2876182) /locus_tag="B565_2563" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 2875979..2875981 /locus_tag="B565_2563" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(2876066..2876068,2876072..2876074,2876099..2876101, 2876105..2876107) /locus_tag="B565_2563" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene 2876261..2877583 /locus_tag="B565_2564" /db_xref="GeneID:10488481" CDS 2876261..2877583 /locus_tag="B565_2564" /codon_start=1 /transl_table=11 /product="sensor histidine protein kinase UhpB" /protein_id="YP_004393216.1" /db_xref="GI:330830264" /db_xref="GeneID:10488481" /translation="MRSAPHRPLIRDQAEIDATYRHWRLHLLLTMYLGYAVFYFTRKS FNFAMPDMLASGMLDKSDIGMLWTLFYITYGCSKFFSGIISDRANPRYFMGVGLMATG VINILFGLSSALWMFAALWVANAFFQGWGWPPCSKLLTSWYSRTERGVWWSAWNTAHN VGGALIPLIVSTIALQHGWRYGMIVPGLIAIIAGLFLCWRLQDTPSAMGLPTVGEWRK DAMELAQQTQDAGLSHRQILRKYVLGNPYIWLLACCYVLVYVVRTAINDWGNLYMTEQ RGFNLMSANSAISMFEVGGFIGALVAGWGSDKLFNGNRGPMNLIFAVGILLAVGSLWL MPFFSYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKNSAGAATGFVGLFAYMGAALS GYPLAKVMEIWHWNGFFVVISVAAGVSALLLLPFLKAQAPRTAQANAE" misc_feature 2876273..2877571 /locus_tag="B565_2564" /note="regulatory protein UhpC; Provisional; Region: PRK11663" /db_xref="CDD:183266" misc_feature 2876342..2877478 /locus_tag="B565_2564" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature order(2876384..2876386,2876393..2876401,2876405..2876410, 2876459..2876461,2876468..2876473,2876480..2876482, 2876492..2876497,2876501..2876506,2876642..2876647, 2876654..2876659,2876666..2876671,2876678..2876680, 2876714..2876719,2876726..2876731,2876747..2876749, 2877035..2877037,2877044..2877049,2877056..2877061, 2877068..2877070,2877110..2877112,2877122..2877124, 2877134..2877136,2877143..2877145,2877155..2877157, 2877311..2877313,2877320..2877325,2877332..2877334, 2877344..2877349,2877356..2877358,2877389..2877394, 2877401..2877406,2877413..2877418,2877425..2877427) /locus_tag="B565_2564" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene complement(2877676..2878809) /locus_tag="B565_2565" /db_xref="GeneID:10488482" CDS complement(2877676..2878809) /locus_tag="B565_2565" /codon_start=1 /transl_table=11 /product="diguanylate cyclase/phosphodiesterase domain 1" /protein_id="YP_004393217.1" /db_xref="GI:330830265" /db_xref="GeneID:10488482" /translation="MDASLLLKLDIFTLMIMALCGYCLGFLTLTIIRVTHNDIPGVGV WWWSSLFAMLGQAGFASLLLTPTPYGSWVGNVFLIFHVSLLLVAQRCFFRQSPGWPVC WGFILLFAAVMTWSVAIDGRIAVRVMISSATFLMLSTLIIWQLWRHGRPDYQVAVWVL IGLNLVLIAMTLMRMFTVWGEVIESPFQRQLFNVLPYVSMLVGSSMLTFGVLLLCNQH RALALRYQASHDPLTGLLNRRGFMERLARGRPAQQGALVVLDLDDFKQINDRHGHEVG DRVLEQVGLALRELEGVLASRFGGEEFVLLFRHATAEEAIARCQSLRVQLAASEVEGI HITVSMGIAHWQGEWHFDSLFSRADDALYRAKREGKNRVCQAA" misc_feature complement(2877688..2878125) /locus_tag="B565_2565" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(2877907..2877909,2878030..2878032)) /locus_tag="B565_2565" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(2877904..2877915,2877919..2877921, 2877979..2877981,2877991..2877993,2878003..2878008, 2878015..2878017)) /locus_tag="B565_2565" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(2877847..2877849,2877931..2877933)) /locus_tag="B565_2565" /note="I-site; other site" /db_xref="CDD:143635" gene 2879330..2880130 /locus_tag="B565_2566" /db_xref="GeneID:10488483" CDS 2879330..2880130 /locus_tag="B565_2566" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter periplasmic amino acid-binding protein" /protein_id="YP_004393218.1" /db_xref="GI:330830266" /db_xref="GeneID:10488483" /translation="MIKKLILSTLLFCGIATAAPTPAPTSTLDAVLERGVLRVGFDAG YQPFEMTNKQGQYIGFDVDLAKMVAKEMGVKVEFVNTAWDGIIPALLTNKFDVIMGGM TVTPQRNLRVNFADPYIVVGQTIVLRKEKAGEIKSFTDLNDPKYKIAVKLGTTGEQAV KRLIPKATLLQFETQDDAKLEVINGKVDAFVYDLPYNAIFASQNQGAVVHLDKPFTFE PLAWAIRKGDQDTLNWFNNYLRQIKGDGSYDRLYKKWFESNAWLKQLK" misc_feature 2879438..2880097 /locus_tag="B565_2566" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature 2879438..2880097 /locus_tag="B565_2566" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature order(2879462..2879464,2879576..2879578,2879651..2879653, 2879792..2879794,2879906..2879908) /locus_tag="B565_2566" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(2879855..2879857,2879867..2879869,2879885..2879887) /locus_tag="B565_2566" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature order(2879981..2879989,2879990..2879992) /locus_tag="B565_2566" /note="hinge residues; other site" /db_xref="CDD:29040" gene 2880231..2881190 /locus_tag="B565_2567" /db_xref="GeneID:10488484" CDS 2880231..2881190 /locus_tag="B565_2567" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter permease" /protein_id="YP_004393219.1" /db_xref="GI:330830267" /db_xref="GeneID:10488484" /translation="MEKQPNQLLWHGVFLLMLLVAVFGIYKAVQSVDYTWRWERIPQY IAYQAEQKNLAEFDGTVMAGTSEAEKGKLFLQDDLDPNIRQAIASTGVQVAEGDTVFR GDTLDTQLSWTAGPIAWGVWVTVKLSLVAGIFAILLGTLAGLARLSPNPALRNLAITY VELIRGTPLLVQIFIVYFFIGTVLNLDRFTAGVAALAVFTGAYVAEIVRAGISSIHKG QMEAGRSLGMTSAQTMRYVILPQAFKRVLPPLAGQFINLIKDSSLVSVISITDLTKAG REVVSSTFSPFEVWFTVALLYLVLTGTLSFLVRRLEVKYARSN" misc_feature 2880573..2881184 /locus_tag="B565_2567" /note="ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; Region: ArtQ; COG4215" /db_xref="CDD:33942" misc_feature 2880594..2881148 /locus_tag="B565_2567" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(2880639..2880644,2880651..2880656,2880669..2880671, 2880699..2880710,2880714..2880743,2880750..2880755, 2880759..2880761,2880822..2880827,2880831..2880833, 2880837..2880839,2880846..2880851,2880855..2880857, 2880867..2880872,2880879..2880881,2880930..2880932, 2880972..2880977,2880984..2880986,2881005..2881016, 2881023..2881028,2881065..2881070,2881098..2881103, 2881110..2881115,2881119..2881124,2881131..2881136, 2881143..2881148) /locus_tag="B565_2567" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(2880717..2880761,2881005..2881022) /locus_tag="B565_2567" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(2880759..2880761,2880807..2880809,2881023..2881025, 2881059..2881061,2881068..2881070,2881098..2881100) /locus_tag="B565_2567" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(2880882..2880920,2880936..2880941,2880951..2880953) /locus_tag="B565_2567" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 2881386..2882129 /locus_tag="B565_2568" /db_xref="GeneID:10488485" CDS 2881386..2882129 /locus_tag="B565_2568" /codon_start=1 /transl_table=11 /product="glutamate transport ATP-binding protein GluA" /protein_id="YP_004393220.1" /db_xref="GI:330830268" /db_xref="GeneID:10488485" /translation="MRAATDPIIKATGVEKFYGSEVHALKNVSTQVAEGEVVVIVGPS GSGKSTFLRTLNQLETINDGNIVVDGICLTEPGDVNKLREEVGMVFQSFNLFPHLTVL DNICLAPQKVRGLSRREAEDRAKALLLKVGLSVKAASYPSQLSGGQQQRVAIARALAM QPRIMLFDEPTSALDPEMVGEVLDVMKGLAREGMTMVVVTHEMGFAREVADRVLFMES GELLVDEKPADFFDNPPSPRLRQFLSQVL" misc_feature 2881404..2882126 /locus_tag="B565_2568" /note="ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; Region: GlnQ; COG1126" /db_xref="CDD:31323" misc_feature 2881410..2882048 /locus_tag="B565_2568" /note="HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP; Region: ABC_HisP_GlnQ_permeases; cd03262" /db_xref="CDD:73021" misc_feature 2881509..2881532 /locus_tag="B565_2568" /note="Walker A/P-loop; other site" /db_xref="CDD:73021" misc_feature order(2881518..2881523,2881527..2881535,2881656..2881658, 2881887..2881892,2881986..2881988) /locus_tag="B565_2568" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73021" misc_feature 2881647..2881658 /locus_tag="B565_2568" /note="Q-loop/lid; other site" /db_xref="CDD:73021" misc_feature 2881815..2881844 /locus_tag="B565_2568" /note="ABC transporter signature motif; other site" /db_xref="CDD:73021" misc_feature 2881875..2881892 /locus_tag="B565_2568" /note="Walker B; other site" /db_xref="CDD:73021" misc_feature 2881899..2881910 /locus_tag="B565_2568" /note="D-loop; other site" /db_xref="CDD:73021" misc_feature 2881974..2881994 /locus_tag="B565_2568" /note="H-loop/switch region; other site" /db_xref="CDD:73021" gene complement(2882237..2883028) /locus_tag="B565_2569" /db_xref="GeneID:10488486" CDS complement(2882237..2883028) /locus_tag="B565_2569" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter/signal transduction systems periplasmic component-like protein" /protein_id="YP_004393221.1" /db_xref="GI:330830269" /db_xref="GeneID:10488486" /translation="MRVWCCLLLGLCMMAHAKTRVEILADAAYPPYSWQEGEEVRGIY ADIIREVTSAMPDYEVVLKPMPWRRGLSMVEQGAAFAIFPPYYMPDTRPYMWPYSQPM LDEELVVMCGASVAANTPQARFPLDYHGLRFGMNAGFAVGGDAFWQAVKEKQIDVEEV KSNRENLLKIVRGRVDCTINDRLSLLYELLNMIKADQLAVADMSLLKQGPVLSKEQGF LGYSRKGEYPYKQAFIDQFDKELYQLKKRDGVKVIVERYLGKSPR" misc_feature complement(2882255..2882968) /locus_tag="B565_2569" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature complement(2882249..2882953) /locus_tag="B565_2569" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature complement(order(2882486..2882488,2882609..2882611, 2882753..2882755,2882828..2882830,2882942..2882944)) /locus_tag="B565_2569" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature complement(order(2882507..2882509,2882525..2882527, 2882537..2882539)) /locus_tag="B565_2569" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature complement(2882369..2882386) /locus_tag="B565_2569" /note="hinge residues; other site" /db_xref="CDD:29040" gene 2883197..2884036 /locus_tag="B565_2570" /db_xref="GeneID:10488487" CDS 2883197..2884036 /locus_tag="B565_2570" /codon_start=1 /transl_table=11 /product="C-5 sterol desaturase" /protein_id="YP_004393222.1" /db_xref="GI:330830270" /db_xref="GeneID:10488487" /translation="MDVQLLLLYLSPIFLAFIGWEMLYLRKHGAAFPTATYQWRDLFA NAALALMHQGGDALAAIAIAYLYDTLWGWRLFDIELTFWSVLLLFLLQDLCYWLFHFT SHHVRWLWASHVVHHSSERLNLSTAFRQSLMYPISGMWLFWIPMIVIGFPPEAVVTTV LLSLGFQFFVHTQVVGKLGWLEWVFNTPSHHRVHHASNAKYIDRNFAGVLIIWDRLFG TFVEEDPAEPCRFGITKPINSFNPLTLTFHEWRDMLHDARGLPWRQKLAVLFGKPAGP ASR" misc_feature <2883494..2883967 /locus_tag="B565_2570" /note="Fatty acid hydroxylase superfamily; Region: FA_hydroxylase; cl01132" /db_xref="CDD:194046" gene complement(2884162..2885577) /locus_tag="B565_2571" /db_xref="GeneID:10488488" CDS complement(2884162..2885577) /locus_tag="B565_2571" /codon_start=1 /transl_table=11 /product="arginine/ornithine antiporter" /protein_id="YP_004393223.1" /db_xref="GI:330830271" /db_xref="GeneID:10488488" /translation="MKESKIGLWSLTALVFSSMVGAGIFSLPQNMAEVAGARAVLIGW GVTGVGILALAMSFLYLSRLRPDLDGGIYSYARAGFGDLVGFFSAWGYWLCATIGVVG YLVIAFAALGSFIDTPEQVWFGEGNTLAAFVGESCILWAVHLLVARGVQQAALFNLVA TLAKSLPLLLFILFACYWFDPVTFAADQQGSSLAVPVSEQVRNTMLITLWVFTGIEGA AVLSARARNRRDVGTATVLGVVLALLLYVLISVLALGILSRPELAALPNPSMAGLMAQ MTGSWGKLLISVGLIVSVLASYVSWTLFSAEVPFSAARHGAFPAIFRRQNRNGTPIAS LWLTSLTVQTCLLLVWLLGKGYTSLLLISTSMILVPYLLIGLFLLKLSFSKKGEGGQG RRLMQAVALVSSGYGFWLLYAAGVEYLLLSLLLYGPGLLLFLYSRRQLGADLCLSGRE RLLAGVTLLSLIPAVWSFAHL" misc_feature complement(2884171..2885574) /locus_tag="B565_2571" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene complement(2885587..2886489) /locus_tag="B565_2572" /db_xref="GeneID:10488489" CDS complement(2885587..2886489) /locus_tag="B565_2572" /codon_start=1 /transl_table=11 /product="Homocysteine S-methyltransferase family protein" /protein_id="YP_004393224.1" /db_xref="GI:330830272" /db_xref="GeneID:10488489" /translation="MKTRELWVLDGGMGRELARRGAPFRQPEWSALALMEAPETVRDV HQAYVASGARVITTNSYALVPFHIGDERFFADGEGLAALAGQLAREVADEQKGAVQVA GSLPPLFGSYRADLFKADRVSELATPLIRALSPHVDIWLAETMSLIAEPLALKALLPD DGKPFWVSFTLEDEAPGNEPRLRSGERVADAVTMLVVAEVDAILFNCCQPEVIEGALE VACTRLQALGRADIRLGAYANAFPPQPKEATANDGLDEIRGDLGPLDYLGWAERWLAA GASLIGGCCGIGPEHIQALSSRLR" misc_feature complement(2885590..2886489) /locus_tag="B565_2572" /note="Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) [Amino acid transport and metabolism]; Region: MHT1; cl14105" /db_xref="CDD:187229" misc_feature complement(2885590..2886468) /locus_tag="B565_2572" /note="Homocysteine S-methyltransferase; Region: S-methyl_trans; pfam02574" /db_xref="CDD:111469" gene complement(2886783..2887325) /locus_tag="B565_2573" /db_xref="GeneID:10488490" CDS complement(2886783..2887325) /locus_tag="B565_2573" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393225.1" /db_xref="GI:330830273" /db_xref="GeneID:10488490" /translation="MKMQSHSRALACVALALALGACSQSAPRKATVAAKPVAPKPAVV VPQPDPDAVVQSGMAEPSPVFDEQYHGPDQGSLESVTALFARGYIESAMRETMLAAVH NDYQLLGMRDVRLTDPVSKFLTSEQAATTAHDYLYAGVQRRLGRPLSPAQWEQIWRGL PQQGRVSDWVKQIKRVLAGR" gene complement(2887345..2888664) /locus_tag="B565_2574" /db_xref="GeneID:10488491" CDS complement(2887345..2888664) /locus_tag="B565_2574" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="YP_004393226.1" /db_xref="GI:330830274" /db_xref="GeneID:10488491" /translation="MSFADSLFFLMLLVGGSVFFSLSEISLAASRKIKLQVMADEGNR QAEKVLALQAQPGNFFTVVQIGLNTVAILGGILGESALNPAIKGIVSQFYQGPWLGEI SSGASFVFVTGMFILIADLMPKRLAMTMPEQIAVVVVRPMLFFVTVLMPLVWVFNGLA NSLFRLMRVSTVRNDEITSDDIYAVMDAGAEAGVIQREEHQLIENVFELQSLGVTSAM TARESLIYFTLQESEESIKAKIAEHPHNKFLVCDHNLDSIKGFVDAKELLIRVIGGQS IDLIGGNLVQNVIIIPDTLNLYEAMEYFKNHRGDFAVVMNEYALVVGIVTMNDLMSTV MGEWATHVVEEQIVQRDENSWLVDGVTPISDVMRAFDIEEFPENQNYETIAGFIMYML RKIPKRTDSVKYAGYKFEVVDIDSYKIDQLLVTRVEPAVAEKPAQES" misc_feature complement(2887366..2888664) /locus_tag="B565_2574" /note="Hemolysins and related proteins containing CBS domains [General function prediction only]; Region: TlyC; COG1253" /db_xref="CDD:31445" misc_feature complement(2888068..2888646) /locus_tag="B565_2574" /note="Domain of unknown function DUF21; Region: DUF21; pfam01595" /db_xref="CDD:190047" misc_feature complement(2887672..2887995) /locus_tag="B565_2574" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the CorC_HlyC domain. CorC_HlyC is a transporter associated domain. This small domain is found in Na+/H+ antiporters, in proteins involved in...; Region: CBS_pair_CorC_HlyC_assoc; cd04590" /db_xref="CDD:73090" misc_feature complement(2887384..2887623) /locus_tag="B565_2574" /note="Transporter associated domain; Region: CorC_HlyC; pfam03471" /db_xref="CDD:190650" gene complement(2888855..2889565) /locus_tag="B565_2575" /db_xref="GeneID:10488492" CDS complement(2888855..2889565) /locus_tag="B565_2575" /codon_start=1 /transl_table=11 /product="phosphate transport system regulatory protein PhoU" /protein_id="YP_004393227.1" /db_xref="GI:330830275" /db_xref="GeneID:10488492" /translation="MDNMNLNKHISGQFNAELESVRNQVLVMGGLVEQQLTDAIAAIH DQDLDAARKIVANDHKVNAMEVAIDEECTRIIAKRQPTASDLRLVMAIIKTITDLERI GDVADKIARMLTDNANKPQPPLVSLENMGRRTIKMLHDVLDAFARMDLDAALAVYKED DKVDREYESIIRELMTYMMEDPRTIPQVLNVLWAARAIERVGDRCQHICEYIVYYVKG KDVRHTKADDLGTLLGKG" misc_feature complement(2888861..2889565) /locus_tag="B565_2575" /note="transcriptional regulator PhoU; Provisional; Region: PRK11115" /db_xref="CDD:182974" misc_feature complement(2889227..2889493) /locus_tag="B565_2575" /note="PhoU domain; Region: PhoU; pfam01895" /db_xref="CDD:190154" misc_feature complement(2888930..2889187) /locus_tag="B565_2575" /note="PhoU domain; Region: PhoU; pfam01895" /db_xref="CDD:190154" gene complement(2889651..2890469) /locus_tag="B565_2576" /db_xref="GeneID:10488493" CDS complement(2889651..2890469) /locus_tag="B565_2576" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter ATPase" /protein_id="YP_004393228.1" /db_xref="GI:330830276" /db_xref="GeneID:10488493" /translation="MINVTTTSTQHTALDLLNLTPEQTALEVKDLNLYYGSKQALFNV NMKIPKGQVTAFIGPSGCGKSTLLRCINRMNDLVEICRIEGEIQLHGHNIYDKSVDVS ALRRQVGMVFQRPNPFPKSIYENVVYGLRLQGINDRRTLDEAAERSLRGAALWDEVKD RLHDNAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLTIEELINELKSQF TVVIVTHNMQQAARVSDQTAFMYMGELIEYSDTNTIFTTPAKKKTEDYITGRYG" misc_feature complement(2889654..2890469) /locus_tag="B565_2576" /note="phosphate transporter ATP-binding protein; Provisional; Region: PRK14236" /db_xref="CDD:184582" misc_feature complement(2889708..2890394) /locus_tag="B565_2576" /note="Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein...; Region: ABC_PstB_phosphate_transporter; cd03260" /db_xref="CDD:73019" misc_feature complement(2890275..2890298) /locus_tag="B565_2576" /note="Walker A/P-loop; other site" /db_xref="CDD:73019" misc_feature complement(order(2889795..2889797,2889888..2889893, 2890131..2890133,2890272..2890280,2890284..2890289)) /locus_tag="B565_2576" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73019" misc_feature complement(2890131..2890142) /locus_tag="B565_2576" /note="Q-loop/lid; other site" /db_xref="CDD:73019" misc_feature complement(2889936..2889965) /locus_tag="B565_2576" /note="ABC transporter signature motif; other site" /db_xref="CDD:73019" misc_feature complement(2889888..2889905) /locus_tag="B565_2576" /note="Walker B; other site" /db_xref="CDD:73019" misc_feature complement(2889870..2889881) /locus_tag="B565_2576" /note="D-loop; other site" /db_xref="CDD:73019" misc_feature complement(2889789..2889809) /locus_tag="B565_2576" /note="H-loop/switch region; other site" /db_xref="CDD:73019" gene complement(2890603..2892252) /locus_tag="B565_2577" /db_xref="GeneID:10488494" CDS complement(2890603..2892252) /locus_tag="B565_2577" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter permease" /protein_id="YP_004393229.1" /db_xref="GI:330830277" /db_xref="GeneID:10488494" /translation="MGKWFKSGAPWIWMTGGAVSLSLVAVLGLLLLIGWRGLVYFWPH PIYEWQLEDASGNKSVLIGEINDREQVPVERLRAAGLALEGEDRELLTRYLVKTGNRE FVDLDFRWVLETDIKSQSQPAELAMVERATNGNFYGYIVGVKEDGRELTSDLHPALQR VLARANALSEQANDLQKGDIGSINYQLERLRLKERKAELDDKLTDQLKAELASERQAL NDRYQVLEKELFSLRSQADRDAITVKDMRGELVTMPMSKVLDVVWPNDMSLLAKVGHW FHQIGKFVSDDPREANTEGGVFPAIFGTVFMVFLMAIIVTPLGVVAAVYLHEYAGKNS LTKIIRIAVINLAGVPSIVYGVFGLGFFVYTLGGSLDQLFYPEALPSPTFGSPGVIWS ALTLAILTLPVVIVSTEEGLARIPSTIRQGSLALGATQAETLWRIVLPMASPAIMTGL ILAIARAAGEVAPLMLVGVVKLAPTLPMDGNFPYLHVERKFMHLGFHIYDVGFQSPNV EAARPLVYATSFLLVTVIVGLNLTAIGIRNHLREKFRSLEH" misc_feature complement(2891416..2892252) /locus_tag="B565_2577" /note="ABC-type phosphate transport system, auxiliary component [Inorganic ion transport and metabolism]; Region: COG4985" /db_xref="CDD:34590" misc_feature complement(<2890849..2891352) /locus_tag="B565_2577" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(2890855..2890860,2890867..2890878, 2890897..2890899,2890906..2890911,2890951..2890953, 2891002..2891004,2891011..2891016,2891026..2891028, 2891032..2891037,2891044..2891046,2891050..2891052, 2891056..2891061,2891176..2891178,2891182..2891187, 2891194..2891223,2891227..2891238,2891272..2891274, 2891287..2891292,2891299..2891304)) /locus_tag="B565_2577" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(2890861..2890878,2891176..2891220)) /locus_tag="B565_2577" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature complement(order(2890858..2890860,2891074..2891076, 2891176..2891178)) /locus_tag="B565_2577" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature complement(order(2890930..2890932,2890942..2890947, 2890963..2891001)) /locus_tag="B565_2577" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene complement(2892285..2894522) /locus_tag="B565_2578" /db_xref="GeneID:10488495" CDS complement(2892285..2894522) /locus_tag="B565_2578" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter permease PstC" /protein_id="YP_004393230.1" /db_xref="GI:330830278" /db_xref="GeneID:10488495" /translation="MSSESLNLVMAGSRKRRIKDKLAKYGVTTGGALVLVALLLIFFY LLYVVKPIFNGASMEPTASFTLPAAGKTAWLGVEEQNEIGYRFSDKGQVNFFAVQGDD KIKVGQSLGQAQVAGDITTVATPAPGQRLIAYGFADGKAQVVQPAFKVSYPNDVRVIE PSLQYPFGEEPVVIDPQGKALQLMVFEATKDKMATAAVTEDGRGVMTVMSGEENFISG EIEWSSENYTIPSLPRHVDQMLLTPNLRILFVREGNRLSVYDIHNLSEISLRNVLEIN APNANVTRVQLLSGASSLLVGNDNGVISQWFEVAKDGKRQFTQIRDFKGDGAVDLLTP EHFRKGFISADKDGIISFFHATGETKLLTETVEGGELSALAISPRHNLLLMQQGNTFK LFSVENEHPEVTWSALWQQVWYEGYPEPQYVWQSTSASNDFEAKLSLVPLVFGTLKAS FYAMVFAVPLGVAGAIYTAYFMSAGLRKYVKPTVEIMAALPTVILGFLAGLWLAPIIE GALPGVILLLVLLPMGMLLTALLWNYLPERGKSLLPEGWHAILLIPVLLLIGWGAFAL SPLIENAFMHGDSRIWLTHEMGIKFDQRNSLVVGIAMGFAVIPTIFSIAEDAVFSVPK HLTQGSLALGATPWQTLSRVVILTASPGIFSAVMMGLGRAVGETMIVLMATGNTPIMD FSMFQGLRTLAANIAVEMPESEVGSSHYRVLFLAAFVLFVFTFLFNTLAEFVRQRLRE KYSSM" misc_feature complement(2892288..2894372) /locus_tag="B565_2578" /note="ABC-type uncharacterized transport system, permease component [General function prediction only]; Region: COG4590" /db_xref="CDD:34228" misc_feature complement(<2892996..2893187) /locus_tag="B565_2578" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(2893023..2893067) /locus_tag="B565_2578" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature complement(2892486..>2892782) /locus_tag="B565_2578" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(2892579..2892581,2892591..2892596, 2892612..2892650)) /locus_tag="B565_2578" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene complement(2894727..2895332) /locus_tag="B565_2579" /db_xref="GeneID:10488496" CDS complement(2894727..2895332) /locus_tag="B565_2579" /codon_start=1 /transl_table=11 /product="CMP/dCMP deaminase zinc-binding protein" /protein_id="YP_004393231.1" /db_xref="GI:330830279" /db_xref="GeneID:10488496" /translation="MDSWNANSTIEQYKEGMGVKPSEVPEIPSQAQSQTEQDEQWMRH AMALAARAEGIGEIPVGAVLVLDGQVVGEGWNRSISEHDACAHAEVMAIRAAGKQLAN YRLLDTTLYVTLEPCCMCAGALIHSRVKRVVYGARDLKTGAAGSVFEILQDPRHNHSV ELIGGVLADACSAQLSAFFKRRRAEKKAAKLALQQSNDTLS" misc_feature complement(2894886..2895209) /locus_tag="B565_2579" /note="Nucleoside deaminases include adenosine, guanine and cytosine deaminases. These enzymes are Zn dependent and catalyze the deamination of nucleosides. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a...; Region: nucleoside_deaminase; cd01285" /db_xref="CDD:29828" misc_feature complement(order(2894973..2894975,2894982..2894984, 2895066..2895074,2895105..2895107,2895153..2895155)) /locus_tag="B565_2579" /note="nucleoside/Zn binding site; other site" /db_xref="CDD:29828" misc_feature complement(order(2894952..2894957,2894964..2894969, 2894976..2894981,2895051..2895053,2895063..2895065, 2895078..2895080)) /locus_tag="B565_2579" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29828" misc_feature complement(order(2894973..2894975,2894982..2894987, 2895066..2895074)) /locus_tag="B565_2579" /note="catalytic motif [active]" /db_xref="CDD:29828" gene 2895534..2895610 /locus_tag="B565_t063" /db_xref="GeneID:10488497" tRNA 2895534..2895610 /locus_tag="B565_t063" /product="tRNA-Pro" /db_xref="GeneID:10488497" gene 2896663..2898270 /locus_tag="B565_2580" /db_xref="GeneID:10490048" CDS 2896663..2898270 /locus_tag="B565_2580" /codon_start=1 /transl_table=11 /product="malate synthase A" /protein_id="YP_004393232.1" /db_xref="GI:330830280" /db_xref="GeneID:10490048" /translation="MSAPAQTHCSARLRIQGEMQPEYAQILTPDAVALISELVERFAP QRGELLKQRVARQARIDGGELPDFLPETAHIREGDWTIRGIPADLQDRRVEITGPVER KMVINALNANVKVFMADFEDSLAPAWNKVIEGQINLRDAVNETISYTSPEGKAYTLTP NPAVLICRVRGLHLPEKHVTFDGEPIPGGLFDFALYFLHNYQALLAKGSGPYFYVPKL QSHLEGRWWSEVFAWTEDKFGLPRGTIKATVLIETLPAVFEMDELLYQMKDHIVALNC GRWDYIFSYIKTLKNHPDRVLPDRQVVTMDKPFLSAYSRLLIKTCHKRGALAMGGMAA FIPAKDAAVNKQVFAKVKADKEREANNGHDGTWVAHPGLADTAMAVFNATIAAGAKNQ IGVLREQDAPITAADLLAPCEGERTEAGMRTNIRVALQYLEAWINGNGCVPIYGLMED AATAEISRTSIWQWIRHGKSLSNGKVVTKELFRQMLAEELEVVKAEVGTARWQAGRFA EASELMEEITCADTLIDFLTLPGYERL" misc_feature 2896738..2898267 /locus_tag="B565_2580" /note="malate synthase A; Region: malate_syn_A; TIGR01344" /db_xref="CDD:188132" misc_feature 2896738..2898267 /locus_tag="B565_2580" /note="Malate synthase A (MSA), present in some bacteria, plants and fungi. Prokaryotic MSAs tend to be monomeric, whereas eukaryotic enzymes are homomultimers. In general, malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to...; Region: malate_synt_A; cd00727" /db_xref="CDD:48433" misc_feature order(2897164..2897166,2897416..2897418,2897494..2897496, 2897500..2897502,2898010..2898012) /locus_tag="B565_2580" /note="active site" /db_xref="CDD:48433" gene 2898326..2899657 /locus_tag="B565_2581" /db_xref="GeneID:10488498" CDS 2898326..2899657 /locus_tag="B565_2581" /codon_start=1 /transl_table=11 /product="isocitrate lyase" /protein_id="YP_004393233.1" /db_xref="GI:330830281" /db_xref="GeneID:10488498" /translation="MKEGTDMALTREQQIQAIEKDWAENPRWKGIKRGYSAEDVVNLR GSLQPVHTLAQRGADKLWGLIHGDAKKGYVNCLGALTGGQAVQQAKAGIEAIYLSGWQ VAADNNLSSTMYPDQSLYPANSVPSVVERINNSFARADQIQWANKVGPQDEGFIDYFL PIVADAEAGFGGVLNAFELMKGMIEAGAAGVHFEDQLASVKKCGHMGGKVLVPTQEAV QKLVAARLAADVCGTTTLVIARTDANAADLLTTDADSYDADFLTGERTAEGFYKVRAG IDQAIARGLAYAPYADMVWCETAKPDLDEARKFAEAIKAKFPDRILAYNCSPSFNWKK NLDDATIARFQQELSDMGYKYQFITLAGIHNMWFHMYELAYQYARGEGMKHYVEMVQE PEFAAASRGYTFVAHQQEVGTGYFDKVTTVIQGGQSSVTALTGSTEEDQFH" misc_feature 2898506..2899447 /locus_tag="B565_2581" /note="Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage. Known members are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate hydrolase (PPH), carboxyPEP mutase (CPEP mutase), oxaloacetate hydrolase (OAH), isocitrate...; Region: ICL_PEPM; cd00377" /db_xref="CDD:119340" misc_feature order(2898512..2898514,2898542..2898544,2898548..2898559, 2898563..2898577,2898581..2898586,2898593..2898595, 2898599..2898607,2898626..2898628,2898638..2898640, 2898656..2898658,2898665..2898670,2898677..2898688, 2898692..2898697,2898704..2898709,2898713..2898718, 2898725..2898730,2898836..2898838,2898854..2898859, 2898869..2898871,2898878..2898880,2898968..2898973, 2898980..2898982,2898989..2898994,2899001..2899003, 2899418..2899426,2899430..2899438,2899442..2899447) /locus_tag="B565_2581" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:119340" misc_feature order(2898614..2898616,2898620..2898628,2898671..2898673, 2898818..2898820,2898824..2898826,2898905..2898907, 2899118..2899120,2899214..2899216,2899298..2899300, 2899304..2899306,2899400..2899402) /locus_tag="B565_2581" /note="active site" /db_xref="CDD:119340" misc_feature order(2898671..2898673,2898818..2898820,2898824..2898826, 2898905..2898907) /locus_tag="B565_2581" /note="Mg2+/Mn2+ binding site [ion binding]; other site" /db_xref="CDD:119340" gene complement(2899764..2900465) /locus_tag="B565_2582" /db_xref="GeneID:10488499" CDS complement(2899764..2900465) /locus_tag="B565_2582" /codon_start=1 /transl_table=11 /product="DnaA-like protein hda" /protein_id="YP_004393234.1" /db_xref="GI:330830282" /db_xref="GeneID:10488499" /translation="MKQPAQLSLAVQLPDDETFVSFYPGNNAHLITALKNAAIGQGSP FLYFWGAKGSGRSHLLHATCAEVNARDAAAAYLSLDQFEQLDPSMLDALESLPLVCLD SLEAIAGNAVWERALFDFYNRWQEKGEGTLVVTGCSAPRKLGLQLPDLASRLDWGVSF HLEELDDEGKLSALQLRAELRGFKLPIDVGRFLLNRLSRDMRTLLTTLNQLDNASFRA KRKLTIPFVKEILEL" misc_feature complement(2899767..2900456) /locus_tag="B565_2582" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" gene complement(2900568..2901587) /locus_tag="B565_2583" /db_xref="GeneID:10488500" CDS complement(2900568..2901587) /locus_tag="B565_2583" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393235.1" /db_xref="GI:330830283" /db_xref="GeneID:10488500" /translation="MFKRVVTALCCGLSFMASAAQVTDLYQGKAPTSGDMVAAQGQAL GQVLIKVTGKRDILTQPVVVKALAAPGDYVKSYGYQDQDSIKYLKAEFKSDKVNSLVS ESQFALLGPARPQMAIWLVVDQGERHLLADQSSDGWAQALREQAQTLGLPISIPLMDL DDNMAVSATDVWGRFADPILQASQRYGAEMVVLGKLTPEGDKWSIDWGLYGPKAAGEV AELTRGNNTGTQAEVAQGFADTLAAWLVKNYGARISGPATSQTLVVDGLSEVDSMIAV QKMLQGMANVSKVAIGKLEGDQVTFNFTLQGEQAELVRALQLESRLRKVDDNGSGLRY QWSQP" misc_feature complement(2900838..2901533) /locus_tag="B565_2583" /note="Uncharacterized protein conserved in bacteria (DUF2066); Region: DUF2066; cl01278" /db_xref="CDD:154311" gene complement(2901738..2902364) /locus_tag="B565_2584" /db_xref="GeneID:10488501" CDS complement(2901738..2902364) /locus_tag="B565_2584" /codon_start=1 /transl_table=11 /product="Uracil phosphoribosyltransferase" /protein_id="YP_004393236.1" /db_xref="GI:330830284" /db_xref="GeneID:10488501" /translation="MKVVEVKHPLVKHKIGLMREGDISTKRFRELAKEVGSLLTYEAT SDFETEKVIIDGWNGPVEVDQIKGKKVTVVPILRAGLGMMDGVLEHMPSARVSVVGIY RDEETLQPVPYFEKIVSNIEERLALVIDPMLATGGSMIATIDLLKKKGCQSIKVLVLV AAPEGIKALEAAHPDVELYCASVDQGLNEKGYIVPGLGDAGDKIFGTK" misc_feature complement(2901741..2902364) /locus_tag="B565_2584" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene 2902541..2903578 /locus_tag="B565_2585" /db_xref="GeneID:10488502" CDS 2902541..2903578 /locus_tag="B565_2585" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine cyclo-ligase" /protein_id="YP_004393237.1" /db_xref="GI:330830285" /db_xref="GeneID:10488502" /translation="MTDKTSLSYKDAGVDIDAGNALVERIKGVSKRTRRPEVLGGLGG FGALCQIPAGYKEPVLVSGTDGVGTKLRLAIDLKKHDTVGIDLVAMCVNDLIVQGAEP LFFLDYYATGKLDVDTAAAVVTGIGAGCEQSGCALVGGETAEMPGMYEGEDYDIAGFC VGVVEKSEIIDGSKVGEGDALIALAASGPHSNGFSLIRKILEVSKANVHQPLGDTTLA NALLEPTRIYVKPVLKLIKECEIHALSHITGGGFWENIPRVLPANTQAVIDEQSWQWP AVFSWLQQAGNVTRHEMYRTFNCGVGMIIALPANQLEKALTLLKAEGENAWHIGHIAK AADGEEQVVIK" misc_feature 2902559..2903536 /locus_tag="B565_2585" /note="phosphoribosylaminoimidazole synthetase; Provisional; Region: PRK05385" /db_xref="CDD:180049" misc_feature 2902658..2903536 /locus_tag="B565_2585" /note="PurM (Aminoimidazole Ribonucleotide [AIR] synthetase), one of eleven enzymes required for purine biosynthesis, catalyzes the conversion of formylglycinamide ribonucleotide (FGAM) and ATP to AIR, ADP, and Pi, the fifth step in de novo purine...; Region: PurM; cd02196" /db_xref="CDD:100032" misc_feature order(2902673..2902687,2902715..2902726,2902730..2902732, 2902736..2902738,2902754..2902756,2902820..2902822, 2902832..2902834,2902850..2902852,2902859..2902861, 2902868..2902870,2902961..2902963,2902973..2902975, 2902979..2902981,2903000..2903005,2903015..2903017, 2903312..2903314) /locus_tag="B565_2585" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100032" misc_feature order(2902820..2902822,2902955..2902963) /locus_tag="B565_2585" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:100032" gene 2903575..2904213 /locus_tag="B565_2586" /db_xref="GeneID:10488503" CDS 2903575..2904213 /locus_tag="B565_2586" /codon_start=1 /transl_table=11 /product="phosphoribosylglycinamide formyltransferase 1" /protein_id="YP_004393238.1" /db_xref="GI:330830286" /db_xref="GeneID:10488503" /translation="MMRILVLISGSGSNLQAILDHCASGKIAGEVVGVISNKADAYGL VRAKEAGVATSILAQQQFASREEYDAALLALMADYQPDLVVLAGFMRILSGDLVRHFA GRMINIHPSLLPKYQGLHTHQRAIDAGDSEHGASVHFVTEELDGGPVILQARVPIFEG DTADEVAARVQAQEHSIYPLVVRWFCEGRLQMVDGAVQLDGALLGPAGYACE" misc_feature 2903575..2904174 /locus_tag="B565_2586" /note="phosphoribosylglycinamide formyltransferase; Reviewed; Region: purN; PRK05647" /db_xref="CDD:180182" misc_feature 2903581..2904129 /locus_tag="B565_2586" /note="Phosphoribosylglycinamide formyltransferase (GAR transformylase, GART); Region: FMT_core_GART; cd08645" /db_xref="CDD:187714" misc_feature order(2903596..2903598,2903611..2903619,2903830..2903853, 2903866..2903868,2903893..2903904,2903926..2903928, 2903986..2903988,2903992..2903997,2904004..2904009, 2904094..2904096) /locus_tag="B565_2586" /note="active site" /db_xref="CDD:187714" misc_feature order(2903611..2903616,2903833..2903838,2903896..2903898, 2903902..2903904,2904094..2904096) /locus_tag="B565_2586" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187714" misc_feature order(2903830..2903832,2903839..2903841,2903845..2903853, 2903866..2903868,2903893..2903895,2903992..2903997, 2904004..2904009) /locus_tag="B565_2586" /note="cosubstrate binding site; other site" /db_xref="CDD:187714" misc_feature order(2903893..2903895,2903899..2903901,2904007..2904009) /locus_tag="B565_2586" /note="catalytic site [active]" /db_xref="CDD:187714" gene complement(2904436..2905197) /locus_tag="B565_2587" /db_xref="GeneID:10488504" CDS complement(2904436..2905197) /locus_tag="B565_2587" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393239.1" /db_xref="GI:330830287" /db_xref="GeneID:10488504" /translation="MISHRKLETVLNHLLEPHAIKDYCPNGLQVEGRERIRKVVTGVT ASQALIDAAVAAEADAILVHHGYFWSGEPAQITGMKQRRLKTLLTHDINLFAYHLPLD VHPEVGNNAQLAKLLDIKVRRGLEPWNSKSVAMVGKLEEPMSGRDFAKLIAERLGREP LYCGDTGPELIRSVAWCTGGGQSYINLAAEQGIDAFISGEASEQTIHTAREMGMHFYA AGHHATERYGVKALGEWLATVHGLDVTFIDIDNPV" misc_feature complement(2904439..2905185) /locus_tag="B565_2587" /note="Uncharacterized conserved protein [Function unknown]; Region: COG0327" /db_xref="CDD:30675" misc_feature complement(2904439..2905179) /locus_tag="B565_2587" /note="NIF3 (NGG1p interacting factor 3); Region: NIF3; cl01309" /db_xref="CDD:194097" gene complement(2905339..2906682) /locus_tag="B565_2588" /db_xref="GeneID:10488505" CDS complement(2905339..2906682) /locus_tag="B565_2588" /codon_start=1 /transl_table=11 /product="Fis family two component sigma54 specific transcriptional regulator" /protein_id="YP_004393240.1" /db_xref="GI:330830288" /db_xref="GeneID:10488505" /translation="MTQARILVVEDDNGLREALVDTLLLGGYECREADSGERALLALS RQPFDMVISDIQMGGMDGLTLLATIRQQYPQIPVLLMTAYANIDGAVRAMREGAIDYL AKPFSPEVLLNQVSRYVPAQKVEKRAVVYGDPKTAELFQLATRVARSEATVMVTGPSG TGKEVLARYIHDNSSRAEQPFVAINCAAIPENMLEATLFGYEKGAFTGAVQGCPGKFE QAQGGTLLLDEITEMDQGLQAKLLRVLQEKEVERLGSRKMIPLDVRVIATSNRDLKKA VQDGLFREDLYYRLNVFPLRWSALCERPGDILPLAEHLLALHASQQGLPTPQLTDASR ERLLAHLWPGNVRELDNVVQRALILSPDGVIDCDHLILEELDEQEMEFVSVERSYGGD RLGSELKQQEHQIILDTLQDCNGSRKAVADRLGISPRTLRYKLAQMREAGIDLPA" misc_feature complement(2905342..2906682) /locus_tag="B565_2588" /note="Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]; Region: AtoC; COG2204" /db_xref="CDD:32386" misc_feature complement(2906326..2906664) /locus_tag="B565_2588" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(2906368..2906373,2906380..2906382, 2906437..2906439,2906497..2906499,2906521..2906523, 2906650..2906655)) /locus_tag="B565_2588" /note="active site" /db_xref="CDD:29071" misc_feature complement(2906521..2906523) /locus_tag="B565_2588" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(2906497..2906505,2906509..2906514)) /locus_tag="B565_2588" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(2906365..2906373) /locus_tag="B565_2588" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(2905810..2906241) /locus_tag="B565_2588" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(2906191..2906214) /locus_tag="B565_2588" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(2905873..2905875,2905999..2906001, 2906188..2906211)) /locus_tag="B565_2588" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(2905996..2906013) /locus_tag="B565_2588" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(2905816..2905818) /locus_tag="B565_2588" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature complement(2905369..2905491) /locus_tag="B565_2588" /note="Bacterial regulatory protein, Fis family; Region: HTH_8; cl01091" /db_xref="CDD:186327" gene complement(2906679..2907713) /locus_tag="B565_2589" /db_xref="GeneID:10488506" CDS complement(2906679..2907713) /locus_tag="B565_2589" /codon_start=1 /transl_table=11 /product="two-component system flagellar sensor histidine kinase FlrB" /protein_id="YP_004393241.1" /db_xref="GI:330830289" /db_xref="GeneID:10488506" /translation="MTIQQQDMPLQSHEVSQLYAIFKALPTGVLLLDGAGVVTRANPA AISLLGEPLEGELWRHIIARCFEPREDDGHEISLRDGRRVQLSTQPLPDQPGQLVFIN DLTETRKLQDRINHMKRLSALGNMAASLAHQIRTPLSAAMLYAANLVNRTLKPESRTQ FQQKLMARLQDLEKQINDILLFARNGDNQVVTPISVQGLLAEVQAGAEAFCQQQGCEL HMEAPEPDLCLLANSSALAGAINNLIANAQQAGATSLLVSAVRSGARVEVRVIDNGKG IPSHQLGQVFEPFFTTRSQGTGLGLAVVQSVVRAHQGEVGVASVPGEGTCFTLSFPLH QQPVQLGGVA" misc_feature complement(2907477..2907668) /locus_tag="B565_2589" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature complement(2906703..2907629) /locus_tag="B565_2589" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:30987" misc_feature complement(2907162..2907356) /locus_tag="B565_2589" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature complement(order(2907177..2907179,2907189..2907191, 2907198..2907200,2907210..2907212,2907219..2907221, 2907231..2907233,2907282..2907284,2907291..2907293, 2907303..2907305,2907312..2907314,2907324..2907326, 2907336..2907338)) /locus_tag="B565_2589" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature complement(2907318..2907320) /locus_tag="B565_2589" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature complement(2906721..>2906945) /locus_tag="B565_2589" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(2906733..2906735,2906739..2906744, 2906757..2906759,2906763..2906765,2906811..2906822, 2906883..2906888,2906892..2906894,2906898..2906900, 2906904..2906906)) /locus_tag="B565_2589" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(2906814..2906816,2906820..2906822, 2906886..2906888,2906892..2906894)) /locus_tag="B565_2589" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(2907820..2909241) /locus_tag="B565_2590" /db_xref="GeneID:10488507" CDS complement(2907820..2909241) /locus_tag="B565_2590" /codon_start=1 /transl_table=11 /product="FleQ protein" /protein_id="YP_004393242.1" /db_xref="GI:330830290" /db_xref="GeneID:10488507" /translation="MVEMGVLIVDADAQRRQQLGTVLSFMGIPWQEVAQSDLDVAIES SGPLQGVLVGELTDRPLSELLAAFPRTPFLSLVEADLPNSNFIGVALSPFTYESLTRH LHFCQAFVSLHPRQQTHDKGQALLRLLVGKGKGIQEVRRLISQVAETDANVLILGESG TGKEVVARAIHELSSRSSGPFVPINCGAIPAELLESELFGHEKGAFTGAIAARRGRFE LAQGGTLFLDEIGDMPMPMQVKLLRVLQERLFDRVGGGKPIQADVRIIAATHRDLEAM IRTQGFREDLYYRLNVFPIETPPLRDRIDDIPLLLQELLNRHAEQHHGFIRLTQRALE SLMQYPWPGNVRELSNLLERLLILYPHQIVDVADLPSRYRLLPSEPRDERLTEMDERD ALAAVFQDPPELDHSLASARTMQLPEEGVNLKEMLADLEVELIRQALESQDGVVARAA DLLGMRRTTLVEKMKKYGMSKDV" misc_feature complement(2907826..2909241) /locus_tag="B565_2590" /note="Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]; Region: AtoC; COG2204" /db_xref="CDD:32386" misc_feature complement(2908918..2909226) /locus_tag="B565_2590" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cl09944" /db_xref="CDD:189206" misc_feature complement(2908369..2908842) /locus_tag="B565_2590" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(2908750..2908773) /locus_tag="B565_2590" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(2908432..2908434,2908558..2908560, 2908747..2908770)) /locus_tag="B565_2590" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(2908555..2908572) /locus_tag="B565_2590" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(2908375..2908377) /locus_tag="B565_2590" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature complement(2907841..2907963) /locus_tag="B565_2590" /note="Bacterial regulatory protein, Fis family; Region: HTH_8; cl01091" /db_xref="CDD:186327" gene complement(2909510..2910388) /locus_tag="B565_2591" /db_xref="GeneID:10488508" CDS complement(2909510..2910388) /locus_tag="B565_2591" /codon_start=1 /transl_table=11 /product="Topoisomerase DNA binding C4 zinc finger domain-containing protein" /protein_id="YP_004393243.1" /db_xref="GI:330830291" /db_xref="GeneID:10488508" /translation="MNTLVLSGLLLLALLVLAIFWSRGRQQKRLPYDVQETLFSPAER SFLGVLDLAVGDKARVFAKVRVADVLTPQAGIGKSKWQQYFNKISAKHFDYLLCHPAD LSFICAIELDDSSHRHQKRKARDLFLKTACDSAGLPLLQIPASASYLVEELREQILPL LVKTSEPLIDDLPHGARREPTFNPLLLDGVDVGAGMRDRTAHAEAISPASLRESAIQA KGGVETPQSEGELVDGLFADVEDDEEHEVHHCPRCDAPLVEREAKKGPHAGRLFLACS RFPECRYAAPHHHNRH" misc_feature complement(2909918..2910286) /locus_tag="B565_2591" /note="Protein of unknown function (DUF2726); Region: DUF2726; pfam10881" /db_xref="CDD:151330" misc_feature complement(2909519..2909641) /locus_tag="B565_2591" /note="Topoisomerase DNA binding C4 zinc finger; Region: zf-C4_Topoisom; cl11977" /db_xref="CDD:143760" gene 2910585..2911100 /locus_tag="B565_2592" /db_xref="GeneID:10488509" CDS 2910585..2911100 /locus_tag="B565_2592" /codon_start=1 /transl_table=11 /product="ACT domain-containing protein" /protein_id="YP_004393244.1" /db_xref="GI:330830292" /db_xref="GeneID:10488509" /translation="MQKQLVVTVIGADKPGIVESLAAVISREQGNWLGSAMSELAGQF AGILHVSVPDEHYRSLCEALALLPGLTISFAEGTPTTEPAHQVMMTVTGNDRPGIVHE VASILRQLEINVADLTTGCEPAPHSGAPLFYAHALVALPDGLAMDTLITALESLSDDL VVDIDEAFSEQ" misc_feature 2910585..2911073 /locus_tag="B565_2592" /note="Glycine cleavage system regulatory protein [Amino acid transport and metabolism]; Region: GcvR; COG2716" /db_xref="CDD:32609" misc_feature 2910594..2910794 /locus_tag="B565_2592" /note="ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme; Region: ACT; cl09141" /db_xref="CDD:195804" misc_feature 2910846..2911079 /locus_tag="B565_2592" /note="ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains; Region: ACT_GcvR_2; cd04869" /db_xref="CDD:153141" gene 2911175..2913244 /locus_tag="B565_2593" /db_xref="GeneID:10488510" CDS 2911175..2913244 /locus_tag="B565_2593" /codon_start=1 /transl_table=11 /product="polyphosphate kinase" /protein_id="YP_004393245.1" /db_xref="GI:330830293" /db_xref="GeneID:10488510" /translation="MSTDKQYEEKELSWLSFNERVLQEAMDKTVPLIERVRFLGIFSS NQDEFFKVRVSDVKRRILINEVHGGDDEAKVLLRAIQQKVMALGEAFDNTYKELLIAL ARHNIFLVNENQLSDAIQKWLRVFFKEKVLRHIIPILLNKEVNPVKFLKDEYTYLAIE MKKNGQVIQYALVEVPTDDLPRFFQLPPEGTRRKKQIIILDNVIRFCLDEIFKGFFDY DEIAAYAVKLTRDAEYDLSDQLDLSLVDKMSDGLKQRLTAMPVRFVYEREMPAAMISF LKLKLQISSYDAIMPGGRYHNFKDFIGFPNVGRDYLENPKLPALDCRDFDGFVNAFDA ITKQDILLYYPYHKFHHFTELVRQAAFDPAVSAIRINIYRVAKKSRIIHSLIDAANNG KKVTVVVELRARFDEAANIDWANILTDAGVKVVFGVPSLKIHSKLCLITRHENGEAVR YAHIGTGNFNEKTAKIYTDFSLLTRNPDITAEVEGVFEYIEYPYKRYKFNHLLVSPIN SRRQLYRLIDNELSNAKAGQPSGIILKINNLVDKDLINRLYAAGQAGVPIQMIIRGMC ALRPGVPGLSDNIKVISIIDRFLEHPRVMVFHNKGNPQLYISSADWMSRNIDGRIEVG TPIYDERLKQRIMDILELQLSDTCKARVIDADQQNEYVKRGNRRKIRSQVAIYDYLKR IESNNGQ" misc_feature 2911193..2913211 /locus_tag="B565_2593" /note="polyphosphate kinase 1; Region: poly_P_kin; TIGR03705" /db_xref="CDD:163417" misc_feature 2912162..2912647 /locus_tag="B565_2593" /note="Catalytic C-terminal domain, first repeat, of Escherichia coli polyphosphate kinase 1 and similar proteins; Region: PLDc_EcPPK1_C1_like; cd09164" /db_xref="CDD:197261" misc_feature order(2912162..2912164,2912171..2912176,2912192..2912203, 2912207..2912221,2912225..2912227,2912234..2912236, 2912462..2912479,2912483..2912485,2912534..2912542, 2912564..2912584,2912588..2912590,2912600..2912602, 2912606..2912611,2912618..2912623,2912627..2912632, 2912636..2912644) /locus_tag="B565_2593" /note="domain interface [polypeptide binding]; other site" /db_xref="CDD:197261" misc_feature order(2912291..2912296,2912384..2912386,2912474..2912476, 2912480..2912482,2912540..2912542,2912546..2912548, 2912573..2912575,2912579..2912581) /locus_tag="B565_2593" /note="active site" /db_xref="CDD:197261" misc_feature 2912474..2912476 /locus_tag="B565_2593" /note="catalytic site [active]" /db_xref="CDD:197261" misc_feature 2912669..2913163 /locus_tag="B565_2593" /note="Catalytic C-terminal domain, second repeat, of Escherichia coli polyphosphate kinase 1 and similar proteins; Region: PLDc_EcPPK1_C2_like; cd09167" /db_xref="CDD:197264" misc_feature order(2912669..2912680,2912693..2912695,2912936..2912956, 2912993..2913001,2913029..2913043,2913047..2913049, 2913056..2913058,2913065..2913070,2913077..2913082, 2913089..2913091) /locus_tag="B565_2593" /note="domain interface [polypeptide binding]; other site" /db_xref="CDD:197264" misc_feature order(2912861..2912863,2912939..2912941,2912945..2912947, 2912951..2912953,2912999..2913001,2913005..2913007, 2913032..2913034,2913038..2913040) /locus_tag="B565_2593" /note="active site" /db_xref="CDD:197264" misc_feature 2912945..2912947 /locus_tag="B565_2593" /note="catalytic site [active]" /db_xref="CDD:197264" gene 2913234..2914724 /locus_tag="B565_2594" /db_xref="GeneID:10488511" CDS 2913234..2914724 /locus_tag="B565_2594" /codon_start=1 /transl_table=11 /product="Exopolyphosphatase" /protein_id="YP_004393246.1" /db_xref="GI:330830294" /db_xref="GeneID:10488511" /translation="MDNSLYAAVDLGSNSFHMVIAHLSEGRFRIVDRIKERVRLAEGM DEQKRMSPEAMERGLACLSLFAERLTNIKPDQIRIAGTYTLRRASNAREFVSEAAKVL NHPIEIISGQEEARLIYQGVAHTQHIEGQVLVIDIGGGSTELIIGEGFEHKALTSRKM GCVSFTQSFFASGKLSDKHFTNAVLEAQHQLAPIVNQYRKLGWQSCLGSSGSIRTVRD VLQGEGLTDGSITLEGLMRLKALMIEHKRVDNLKLTGLTEERQEVFAAAVAILLGLFT SLPIERLDYSDGALREGLLYEFEERLQHHDIRERTAQALGTHYRMDKKQAARVEQSVL TLFDALQEPWQMEVEPYRAILGWAARLHEIGLAINYSGIHRHSAYILQHTDLPGFNQD DQALLAALVRFQRKGLKLSELPPLPNHDMQTVLRCIRILRLAVAAHHKRQDNLLPEWK VAVQGDQLVVTLPIDWCEENRLLMQNLEKEHRYCQEQGWPLLFQLG" misc_feature 2913249..2914715 /locus_tag="B565_2594" /note="exopolyphosphatase; Provisional; Region: PRK10854" /db_xref="CDD:182781" misc_feature 2913288..2914124 /locus_tag="B565_2594" /note="Ppx/GppA phosphatase family; Region: Ppx-GppA; pfam02541" /db_xref="CDD:145597" gene complement(2914785..2916128) /locus_tag="B565_2595" /db_xref="GeneID:10488512" CDS complement(2914785..2916128) /locus_tag="B565_2595" /codon_start=1 /transl_table=11 /product="Magnesium transporter" /protein_id="YP_004393247.1" /db_xref="GI:330830295" /db_xref="GeneID:10488512" /translation="MKKTHTILNRHQLLDLAALQGWLEHNLDPVQRADQLLTLRPEEL NCIFDTLPIPQGAELLGSLSAESAGRLLQRLHGSIVSVLQEAIPRREMVAILRKLGRQ DRTMLLARFPTQAQAMYYSLLDWPTESVGANMRHEYLAVREEDTVGHAKQLIHDAWDN AQLFRHIYVVNGDGRLQGSLSLKTLLIADPLASVATLMDRETVRINARADQELAARLL IDRDLSVLPVEDQGRLVGIFHVDDAADILELESTEDAEMQGGSSPLDTPYLQATPWQL WRKRVGWLLILFVAEAYTGTVLRAFEEQLEAAIALAFFIPLLIGTGGNSGTQITTTIV RAMAVGEVSLRNLGTVLKKELSTGLLISGAIAMAAWVRAWSLGVGPQIGMVVTFTIIA IVLWSATVASIIPMVLRRFRIDPAVVSAPFIATLVDGTGLIIYFEMAKLLLPELQ" misc_feature complement(2914791..2916065) /locus_tag="B565_2595" /note="Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]; Region: MgtE; COG2239" /db_xref="CDD:32420" misc_feature complement(2915751..2916050) /locus_tag="B565_2595" /note="MgtE intracellular N domain; Region: MgtE_N; cl15244" /db_xref="CDD:197452" misc_feature complement(2915388..2915711) /locus_tag="B565_2595" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain in the magnesium transporter, MgtE. MgtE and its homologs are found in eubacteria, archaebacteria, and eukaryota. Members of this family transport Mg2+ or other...; Region: CBS_pair_Mg_transporter; cd04606" /db_xref="CDD:73106" misc_feature complement(2914812..2915171) /locus_tag="B565_2595" /note="Divalent cation transporter; Region: MgtE; cl00786" /db_xref="CDD:120115" gene complement(2916604..2917812) /locus_tag="B565_2596" /db_xref="GeneID:10488513" CDS complement(2916604..2917812) /locus_tag="B565_2596" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein 3" /protein_id="YP_004393248.1" /db_xref="GI:330830296" /db_xref="GeneID:10488513" /translation="MRITTNMIYDRNIYSLNSANERLNTAYQQLQTGNKFQTAGEDPA GMSQKMALTKEIDLFKQYSVNGSLLENSLGHEETVLDSLNTAMLSAQTLIQKSNNGAI SMDDRKAIASELEGLQQQMFDLMNSKNSSGEFIFGGNQSKTQPYIKDANGKYIYQGDP GQRNIQVSPTVQIAANDSGQDLFEIVATRRTASATTANIKVGVGDQGNFDNFYKSNYN SALPSNTYTVSTIIGPPDTYDIKDAGGTTLQTGNYTAGTKIPFNGLELTLDLPAGGAA QQFDLNPPKNDNVLNGMSDFITALRDPAITADNFALEVADATVHMKNARLNIDHGLGE LGGRMNSLEAVMDSNEGLSTLNAEARAKVSEADLYEVISALSKEDAALSASQLSFSKI SRLTLFDYIR" misc_feature complement(2916610..2917812) /locus_tag="B565_2596" /note="flagellar hook-associated protein FlgL; Reviewed; Region: flgL; PRK08870" /db_xref="CDD:181571" misc_feature complement(2917390..2917806) /locus_tag="B565_2596" /note="Bacterial flagellin N-terminal helical region; Region: Flagellin_N; pfam00669" /db_xref="CDD:144315" gene complement(2917817..2919820) /locus_tag="B565_2597" /db_xref="GeneID:10488514" CDS complement(2917817..2919820) /locus_tag="B565_2597" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein FlgK" /protein_id="YP_004393249.1" /db_xref="GI:330830297" /db_xref="GeneID:10488514" /translation="MASDLLGIGSSGVLAQQRLLQTTSNNIVNVNSQGYVRERTLVYT NTIGLGTGDIKTQRVINDYMQGEVRRDTSAYHASLTHYEQLAGVDSLLGDTSNSVGAA ITSYFKSFHSANESPAEIGGRKVVMTELSGMVNRFHTLSAQLDKQSDTLNTRIEDETK QVNSLLTSINDLNQAIIRTQGSPEENLMLFDQRDEAIRQLSEKMDIRTVAQPNGSMLV NMSTGHSLILDGGVAQFKVIAGDPDSRDQELQLTLGDNQATIDHDTFGGAMGGLFKAR TDLEPTKRELGQLAVAMADAMNQQNRLGMDLDNEIGGDIFTLPTSKGLPYGNNTGTVG ANVSFVPGKGTSVTPFDYEVRFSSATGYEVFSLDKSGNRTSVATGTTPPATFELTGHG ISIDLTGAPAAGDRLLLQPTKSAAAGLGQLITRPEDLALASPLKAEKTTNNGGGADIK LGGVFNTGAGSGFGTNSLSPTAPQVVKIDANGNYQVFQADGTTLIGTAPASSKGQNLM SAIVNPFPAGAAVYANPKQAPGYEFSITGTVNANDSFKLSYNSNGFADNSNGLVLAEL QNKDLVRKSTNGGTTNDKMTFNQAYSGLVMEVGNNTSQAKTLLKANESKLIQSTGIFE SVSGVNLEEEAANLIRFQQSYAASAQIVSTAKTIFDTLLSSVR" misc_feature complement(2917826..2919814) /locus_tag="B565_2597" /note="flagellar hook-associated protein FlgK; Validated; Region: flgK; PRK05683" /db_xref="CDD:168176" misc_feature complement(2917829..2917942) /locus_tag="B565_2597" /note="Domain of unknown function (DUF1078); Region: DUF1078; pfam06429" /db_xref="CDD:191521" gene complement(2919824..2920897) /locus_tag="B565_2598" /db_xref="GeneID:10488515" CDS complement(2919824..2920897) /locus_tag="B565_2598" /codon_start=1 /transl_table=11 /product="peptidoglycan hydrolase FlgJ" /protein_id="YP_004393250.1" /db_xref="GI:330830298" /db_xref="GeneID:10488515" /translation="MAEFDSNSGMNLGMVQDIKNLDRLRQMSQSKEGQAEALKSASRQ FESIFTQMLFQSMRQANGVLTQDNPMNSSYTQFYEGMLDEQRVADMSSKGGLGLADMV AKQLSPETFTHQDGRVLKMPQRTERTYKPYQPPTAAADDLIAASKVGKDFAEREMTEG VKESHALTMPRRPHRSIPPMGRMVSEEGSATGSGGKEFDTPEEFVNRLMPLAKKAADK LGLSPAVLVAQAALESGWGKRVIKDGEGQVTHNLFGIKADPRWEGPKAVVSTLEYEQG VASRQKAAFRSYESFEESFNDYVDFLTSGSRYKGALAKVDSPDRYFEALQQAGYATDP HYARKLKQVLRSDAIAQYNEMEL" misc_feature complement(2919860..2920897) /locus_tag="B565_2598" /note="flagellar rod assembly protein/muramidase FlgJ; Validated; Region: flgJ; PRK05684" /db_xref="CDD:180199" misc_feature complement(2920463..2920861) /locus_tag="B565_2598" /note="Rod binding protein; Region: Rod-binding; cl01626" /db_xref="CDD:194178" misc_feature complement(2919860..2920276) /locus_tag="B565_2598" /note="Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Region: Glucosaminidase; cl00743" /db_xref="CDD:186171" gene complement(2920941..2922038) /locus_tag="B565_2599" /db_xref="GeneID:10488516" CDS complement(2920941..2922038) /locus_tag="B565_2599" /codon_start=1 /transl_table=11 /product="flagellar P-ring protein FlgI" /protein_id="YP_004393251.1" /db_xref="GI:330830299" /db_xref="GeneID:10488516" /translation="MKSLRLVTLLCCLLPLGVANAARIKDISSVEGVRNNQLIGYGLV VGLPGTGEKNNAFTEQTFRTMLNNFGIKVPDNIKPKIKDVAPVAIHADLPPFSKPGQT IDVTVSAIGEAKSLRGGTLLQSFLKGLDGRVYAVAQGSLVVGGLGAEGADGSKVVINT PTVGRIANGATVEREVPNSFSQGDTITFNLNRPDFTTARRLADVVNDLVGPNTAQALD ATSVKVYAPRDPGQRVSYLATIENLEVDPANEAAKIIVNSRTGTIVIGSQVKLKPAAI SHGGLTVTIAENQQVSQPNPLAGGETTVTNNSTINVQQEPGRMFKFDTGATLDDLVRA VNQVGVAPGDLMAILEALQQAGAIEGQLVIL" misc_feature complement(2920944..2921984) /locus_tag="B565_2599" /note="flagellar basal body P-ring protein; Provisional; Region: flgI; PRK05303" /db_xref="CDD:180004" misc_feature complement(2920947..2921978) /locus_tag="B565_2599" /note="flagellar basal body P-ring protein; Reviewed; Region: flgI; cl14622" /db_xref="CDD:187395" gene complement(2922047..2922721) /locus_tag="B565_2600" /db_xref="GeneID:10488517" CDS complement(2922047..2922721) /locus_tag="B565_2600" /codon_start=1 /transl_table=11 /product="flagellar L-ring protein" /protein_id="YP_004393252.1" /db_xref="GI:330830300" /db_xref="GeneID:10488517" /translation="MMKAVWMLGLLVLGGCSSTPNTPKPDDPEFSPVYGESEPVSVRP TGAIFQPDQVNGIYSDIKAHKVGDIITIELSESTSASKKANTQSGKNNKFNLDPVKLG GVPVTASPYDLSASIAQDSAFKGQAKADQSNSLQGNISVSVAKVLPNGNLVVRGEKWI MLNNGNEYIRITGLIRPEDVTSDNSVSSQKVANARIYYGGTGDLANSQEQGWLTSFFN GPWWPL" misc_feature complement(2922050..2922721) /locus_tag="B565_2600" /note="Flagellar L-ring protein; Region: FlgH; cl00905" /db_xref="CDD:186249" gene complement(2922733..2923521) /locus_tag="B565_2601" /db_xref="GeneID:10488518" CDS complement(2922733..2923521) /locus_tag="B565_2601" /codon_start=1 /transl_table=11 /product="flagellar basal body rod protein FlgG" /protein_id="YP_004393253.1" /db_xref="GI:330830301" /db_xref="GeneID:10488518" /translation="MNPALWISKTGLDAQQTNISVTSNNLANASTVGFKKSRAIFEDL LYQNINQPGGRSSADTELPSGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGY FEIQLPDGSAAYTRNGQFTLNDEGTIVTPGNGYPLQPEIQIPENAQSVTVGEDGQVSV QLKGDGASQVVGQINISDFVNASGLQPMGENMFVETQSSGAAAQGTAGADGLGVIKQG MLETSNVNVTEELVNLIQAQRVYEMNSKVLSAVDGMMSFLIQRT" misc_feature complement(2922742..2923521) /locus_tag="B565_2601" /note="flagellar basal body rod protein FlgG; Provisional; Region: flgG; PRK12693" /db_xref="CDD:183687" misc_feature complement(2923417..2923509) /locus_tag="B565_2601" /note="Flagella basal body rod protein; Region: Flg_bb_rod; cl15245" /db_xref="CDD:197453" misc_feature complement(2922796..2923101) /locus_tag="B565_2601" /note="flagellar basal-body rod protein FlgF; Region: flgF; TIGR02490" /db_xref="CDD:188226" gene complement(2923537..2924283) /locus_tag="B565_2602" /db_xref="GeneID:10488519" CDS complement(2923537..2924283) /locus_tag="B565_2602" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgF" /protein_id="YP_004393254.1" /db_xref="GI:330830302" /db_xref="GeneID:10488519" /translation="MDHLLYIAMSGAKETMNSLAVRGNNLANANTTGFKSDFEQARSM QAFGEGLPSRVFAMAERPGQNLQHGMLMTTGRDLDVAVDGPGWIAVQDPKGGEAYTRM GNLQVNATGNLQTSTGLNVVDDGGQPIVLPMPMEKLEINRDGTISGRPEGAAANLPED FQRIKLVNPAADAVEKGQDGLFRRKDGQNEPASANVGLIAGSLEGSNVNVVDEMTNLI RLQRQFETQVKIMKTAEENDEAQTQLLRIS" misc_feature complement(2923540..2924283) /locus_tag="B565_2602" /note="flagellar basal body rod protein FlgF; Reviewed; Region: flgF; PRK12640" /db_xref="CDD:183642" misc_feature complement(2924179..2924271) /locus_tag="B565_2602" /note="Flagella basal body rod protein; Region: Flg_bb_rod; cl15245" /db_xref="CDD:197453" misc_feature complement(2923609..2923899) /locus_tag="B565_2602" /note="flagellar basal-body rod protein FlgF; Region: flgF; TIGR02490" /db_xref="CDD:188226" gene complement(2924428..2925780) /locus_tag="B565_2603" /db_xref="GeneID:10488520" CDS complement(2924428..2925780) /locus_tag="B565_2603" /codon_start=1 /transl_table=11 /product="flagellar hook protein FlgE" /protein_id="YP_004393255.1" /db_xref="GI:330830303" /db_xref="GeneID:10488520" /translation="MSFNNALSGVNAAQKDLNVTANNIANVNTMGFKESRAEFADVYA NSIFVNAKTQVGNGVATGAVAQQFHQGALQFTNNALDLAIQGNGFFVTSDGLTNLDRT YTRAGAFKLNENSYMVNNQGHYLQGYEINTDGTPKAVSINATKPIQIPDRAGEPIKTS KIEASFNLPSTSTTKPHLFNPSNFDPKDSKTYSSSTSVVIYDSLGEPHTITKYFVRDA DTTDPTKPADPPSWRMYLYQGDKPIDIVGGAQPTMAPTLSQAPRAAQITFGSDGKMNA VTPLTLKTQPLGPGVGNAGIITNGADPTQQVDIVFGTVTQYASPFEVSKLTQDGSTVG RLTKVEITPDGIVSATYSNATTIKVAMVAMAKFANSQGLTQVGDTSWRQSLLSGDALP GTPNSGTFGTIKSSALEQSNVDLTSELVDLITAQRNFQANSRSLEVNSSLQQTILQIR " misc_feature complement(2924431..2925780) /locus_tag="B565_2603" /note="flagellar hook protein FlgE; Validated; Region: flgE; PRK05682" /db_xref="CDD:180198" misc_feature complement(2924788..2925231) /locus_tag="B565_2603" /note="Flagellar basal body protein FlaE; Region: FlaE; pfam07559" /db_xref="CDD:191784" misc_feature complement(2924491..2924787) /locus_tag="B565_2603" /note="flagellar basal-body rod protein FlgF; Region: flgF; TIGR02490" /db_xref="CDD:188226" gene complement(2925791..2926531) /locus_tag="B565_2604" /db_xref="GeneID:10488521" CDS complement(2925791..2926531) /locus_tag="B565_2604" /codon_start=1 /transl_table=11 /product="flagellar hook capping protein" /protein_id="YP_004393256.1" /db_xref="GI:330830304" /db_xref="GeneID:10488521" /translation="MVDTTNNVNGISRTTTQTTGTTTTPKKELDQASFLKLLTMQLSY QDPFKPVDNAQMLSQMTSMSTSEGINSLSTQMGNLNTLMTSSQALQASALVGQNVLLP SNIGYLEKEGSISGVVAVGVENKYSNVKITVEDEKGQVIKEFPLEGDLRGNVEFAWDG KDKSGNPAKPGKYVIKANGTMDGKSESISALTYGKVDSVVLGNGTNPTQLNLRGLGTT TLNSILQISGSNQNKPTTQSKTTSTASI" misc_feature complement(2925923..2926459) /locus_tag="B565_2604" /note="Flagellar hook capping protein; Region: FlgD; cl04347" /db_xref="CDD:194838" gene complement(2926547..2926966) /locus_tag="B565_2605" /db_xref="GeneID:10488522" CDS complement(2926547..2926966) /locus_tag="B565_2605" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgC" /protein_id="YP_004393257.1" /db_xref="GI:330830305" /db_xref="GeneID:10488522" /translation="MSLFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVENTYHA RRPVFAAQLDQAMSDKQGSVGVEVKGIVESKAPLLKEYNPNHPMADKDGFIFKPNVNM VEEMADMINASRSYQTNVQVADSAKKMLQQTLQLGKS" misc_feature complement(2926553..2926966) /locus_tag="B565_2605" /note="flagellar basal body rod protein FlgC; Provisional; Region: flgC; PRK12631" /db_xref="CDD:183636" misc_feature complement(2926865..2926948) /locus_tag="B565_2605" /note="Flagella basal body rod protein; Region: Flg_bb_rod; cl15245" /db_xref="CDD:197453" misc_feature complement(2926559..2926675) /locus_tag="B565_2605" /note="Domain of unknown function (DUF1078); Region: DUF1078; pfam06429" /db_xref="CDD:191521" gene complement(2926966..2927364) /locus_tag="B565_2606" /db_xref="GeneID:10488523" CDS complement(2926966..2927364) /locus_tag="B565_2606" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgB" /protein_id="YP_004393258.1" /db_xref="GI:330830306" /db_xref="GeneID:10488523" /translation="MALSFDKAFGVHQHTISVRAKRAEVLSSNIANADTPGFKARDIN FAQALQEAQSHQGFGLATTSEKHFALNMDAPGTVQYRNPLQPDTGDGNTVDVQQERSE FLRNSLEYQTSLEFMNSKISGLLKALKGEQ" misc_feature complement(2926972..2927364) /locus_tag="B565_2606" /note="Flagella basal body rod protein; Region: Flg_bb_rod; cl15245" /db_xref="CDD:197453" misc_feature complement(2926972..2927364) /locus_tag="B565_2606" /note="flagellar basal body rod protein FlgB; Provisional; Region: flgB; PRK12625" /db_xref="CDD:183631" gene complement(2927661..2928485) /locus_tag="B565_2607" /db_xref="GeneID:10488524" CDS complement(2927661..2928485) /locus_tag="B565_2607" /codon_start=1 /transl_table=11 /product="CheR methyltransferase" /protein_id="YP_004393259.1" /db_xref="GI:330830307" /db_xref="GeneID:10488524" /translation="MKTLSDDLYKQFSNFLAVQSGIVLGDNKQYLVKSRLSPLMAQFG IESLSDLVTRAMSVRERDLKMAVVDAMTTNETLWFRDTYPFQLLTDKIFPELGKSGRP IKIWSAASSSGQEPYSIAMTALEQQMKKPGTLPGGVQIVGTDISTTMLNQCKEGVYDS LALARGLSPERKKMFFEPYGDNKMRVAERVRKLTTFRPLNLLESYSLLGKFDIIFCRN VLIYFAPEVKSKILNQFAASLNPGGYLMLGASESLAGLTDRFEMIRCNPGIVYKVK" misc_feature complement(2928303..2928473) /locus_tag="B565_2607" /note="CheR methyltransferase, all-alpha domain; Region: CheR_N; pfam03705" /db_xref="CDD:112515" misc_feature complement(2927673..2928470) /locus_tag="B565_2607" /note="Methyltransferase, chemotaxis proteins; Region: MeTrc; smart00138" /db_xref="CDD:128443" misc_feature complement(2927679..2928266) /locus_tag="B565_2607" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene complement(2928503..2929414) /locus_tag="B565_2608" /db_xref="GeneID:10488525" CDS complement(2928503..2929414) /locus_tag="B565_2608" /codon_start=1 /transl_table=11 /product="chemotaxis protein methyltransferase CheV" /protein_id="YP_004393260.1" /db_xref="GI:330830308" /db_xref="GeneID:10488525" /translation="MASILDSVNQRTQLVGQNRLELLLFRLNGRQRFGINVFKVREVL QCPPLTVMPKLNSCIRGVAHIRGQTISVIDLSMAVGKRPIDDLSKCFIIISEYNRSIQ GFLVHSVERIINMNWESILPPPKGAGRINYMTAVTEVDGELVEILDVERILNEISPVA TDVSEELVQASVDHPTLGRPVLVADDSSVARKQVQRALEAIGVECVLAKDGREALNML LEMTKNGPIKDQVALVISDIEMPEMDGYTFTAEIRNNPNLKDLHVILHTSLSGVFNQA MVQKVGANNFIAKFQPDELAKAVQNAL" misc_feature complement(2928944..2929360) /locus_tag="B565_2608" /note="CheW-like domain. CheW proteins are part of the chemotaxis signalling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and...; Region: CheW_like; cl00256" /db_xref="CDD:185867" misc_feature complement(2928515..2928874) /locus_tag="B565_2608" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature complement(2928506..2928871) /locus_tag="B565_2608" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(2928548..2928550,2928557..2928559, 2928614..2928616,2928680..2928682,2928704..2928706, 2928857..2928862)) /locus_tag="B565_2608" /note="active site" /db_xref="CDD:29071" misc_feature complement(2928704..2928706) /locus_tag="B565_2608" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(2928680..2928688,2928692..2928697)) /locus_tag="B565_2608" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(order(2928545..2928547,2928548..2928550)) /locus_tag="B565_2608" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" gene 2929559..2930242 /locus_tag="B565_2609" /db_xref="GeneID:10488526" CDS 2929559..2930242 /locus_tag="B565_2609" /codon_start=1 /transl_table=11 /product="flagellar basal body P-ring biosynthesis protein FlgA" /protein_id="YP_004393261.1" /db_xref="GI:330830309" /db_xref="GeneID:10488526" /translation="MINRLLLISLFFGSISSSYASDVTTYLQEKAQEFVYSQLDIPLD ARAEVTSATLDERLPLTRCEDLLTISLPAKMEIRRNTTVYLKCEEERPWDVYLPVRVS IQKPYVTVANPIAKGDLLSESQLALAYQDQTLIRGDYLADTAPLVGVRSKRELKPGQP IRLSQVCVVCKGDQVTLTAENSNFQIKTMARALQDGSFGEIIKLVNIRSGKTVEGKVS AVGAVSVTF" misc_feature 2929637..2930239 /locus_tag="B565_2609" /note="SAF domain; Region: SAF; cl00555" /db_xref="CDD:193866" gene 2930334..2930654 /locus_tag="B565_2610" /db_xref="GeneID:10488527" CDS 2930334..2930654 /locus_tag="B565_2610" /codon_start=1 /transl_table=11 /product="anti-sigma-D factor" /protein_id="YP_004393262.1" /db_xref="GI:330830310" /db_xref="GeneID:10488527" /translation="MAINNINNLANNRLQNTANSQGTGSKSVTSSPENKAATVKLDSV SLTSEAQQLQKMQQNLNTASTGNESKVERLKKAVASGEYQVNSEAVAKKMFSFEANLD KVLG" misc_feature 2930457..2930627 /locus_tag="B565_2610" /note="Anti-sigma-28 factor, FlgM; Region: FlgM; cl01052" /db_xref="CDD:194019" gene 2930702..2931067 /locus_tag="B565_2611" /db_xref="GeneID:10488528" CDS 2930702..2931067 /locus_tag="B565_2611" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FlgN" /protein_id="YP_004393263.1" /db_xref="GI:330830311" /db_xref="GeneID:10488528" /translation="MQGILEEEFSLLEQHQALALPALTERKQQLLAAIETLDKTLAEM PELALQLAAYPDQMAQLRAKLDACQAQNDINGRLLELSIVSNRRLATFLSQLRDRNSL TYDARGNTRSGTRSYGIKA" misc_feature 2930702..2931037 /locus_tag="B565_2611" /note="FlgN protein; Region: FlgN; cl09176" /db_xref="CDD:195813" gene complement(2931104..2931646) /locus_tag="B565_2612" /db_xref="GeneID:10488529" CDS complement(2931104..2931646) /locus_tag="B565_2612" /codon_start=1 /transl_table=11 /product="phosphodiesterase YfcE" /protein_id="YP_004393264.1" /db_xref="GI:330830312" /db_xref="GeneID:10488529" /translation="MKLAIISDIHGSIIALERVLTQLEPWQPDHYLLLGDLLNHGPRN PLPEGYNPAAVADRLNELAPQIIAVRGNCDSEVDQMLLRFPITAPYNQLLVDERRWFV SHGHLYRPDEVQLPAGSLFLSGHTHVPVLEWQGERILMNPGSICFPRGELPASYGCYE DGVLRVNACEDGRELLRLEL" misc_feature complement(2931167..2931643) /locus_tag="B565_2612" /note="Escherichia coli YfcE and related proteins, metallophosphatase domain; Region: MPP_YfcE; cd00841" /db_xref="CDD:163617" misc_feature complement(order(2931266..2931268,2931272..2931274, 2931335..2931337,2931428..2931433,2931539..2931541, 2931617..2931619,2931623..2931625)) /locus_tag="B565_2612" /note="active site" /db_xref="CDD:163617" misc_feature complement(order(2931266..2931268,2931272..2931274, 2931335..2931337,2931431..2931433,2931539..2931541, 2931617..2931619,2931623..2931625)) /locus_tag="B565_2612" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163617" misc_feature complement(order(2931329..2931331,2931350..2931385, 2931425..2931439,2931446..2931448,2931557..2931562)) /locus_tag="B565_2612" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:163617" gene complement(2931657..2933294) /locus_tag="B565_2613" /db_xref="GeneID:10488530" CDS complement(2931657..2933294) /locus_tag="B565_2613" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter periplasmic binding protein" /protein_id="YP_004393265.1" /db_xref="GI:330830313" /db_xref="GeneID:10488530" /translation="MRYGFFPKLAQRWLSPLLLAVLAGPLAHATTVEQQPLLADRQTL VKGNGAEPESLDPALVRSGFPGEAVLVDLFEGLVSDDGQGHIVPAQAQRWEVSEDGLE WRFFLRPQLKWSNGEPLVAADFVYAWRRLLDPAINSPSAGLLLATGINNAQSIYAGAL ELGNLGIEAQSDQILKITLERPAPYFLQLISQRPFVPVNQKAIAKFGKQWTEPGKLVS NGAYRLASWTPNEQIEAERNIHYWDDLHTRIGRVTYLPITSQHAERLRYEAGEIQLTN KVSLGYYQKMKRESPERLWGLPLFGTYLYAFNLKRPELQDVRVRQALSMAVDRQQLIG SVSGQDEQAAWSLLPEMPGYPQVILPVALEDMPTRQAKAAALLSAAGYNSANPLKLSI TYNSAETHKQMAMAIAAMWQKLGVQVTLNSLEWGAYQVAKDSGDFQVARSFLFGDYVE PSAMLGSFRCQDLRNESGYCNPDFDLLLEQAANTLDSASRIELYRHAEQLLLEEAPIL PVYHYNQMRLVDPALRGLPSQNLKGTIATKDLYFSPQ" misc_feature complement(2931672..2933183) /locus_tag="B565_2613" /note="oligopeptide ABC transporter substrate-binding protein OppA; Provisional; Region: PRK15104" /db_xref="CDD:185059" misc_feature complement(2931672..2933171) /locus_tag="B565_2613" /note="The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold; Region: PBP2_OppA; cd08504" /db_xref="CDD:173869" misc_feature complement(order(2931756..2931758,2931954..2931968, 2931972..2931974,2932020..2932022,2932398..2932400, 2932467..2932469,2933094..2933096)) /locus_tag="B565_2613" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173869" gene 2933451..2934350 /locus_tag="B565_2614" /db_xref="GeneID:10488531" CDS 2933451..2934350 /locus_tag="B565_2614" /codon_start=1 /transl_table=11 /product="drug/metabolite family transporter" /protein_id="YP_004393266.1" /db_xref="GI:330830314" /db_xref="GeneID:10488531" /translation="MGYEWLALASASLWAIAALISVKPARHLGAFAYSRWRMFLVSLM LGTMSLLTGGWQTLTASALPLLAISGLVGIFVGDTALFACMNRLGPRRSALLFSCHAL FSALLGLWLFNEQLTGWRLLGAMLVFAGVMLAILFGRRSSSNEWEQIRGNLALGIGLG LTAALCQSVGAIIAKPVMMSGEVDAVSASGIRMGSALLAHCVLRLGRLPLAMPLKPVN RHILAMIATNGFLAMGLGMTLILMALRQGEVGMVAILSSTTPVLLLPLLWWHSGERPS IAAWAGALIATLGTALVLGFSTH" misc_feature <2933613..2933858 /locus_tag="B565_2614" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene complement(2934370..2935062) /locus_tag="B565_2615" /db_xref="GeneID:10488532" CDS complement(2934370..2935062) /locus_tag="B565_2615" /codon_start=1 /transl_table=11 /product="Pseudouridine synthase" /protein_id="YP_004393267.1" /db_xref="GI:330830315" /db_xref="GeneID:10488532" /translation="MRLDKFLCDCSDLTRSLAGKLIRQGEVMVDGIVVKQPAFHINEQ SQIEFDGVLLTLEQRNRYFMLHKPEGYVCSNEDPDHPTVFFLMDEPAMGKLHVVGRLD LDTTGLVLVTDDGQWSHRITSPRHECAKTYHVWLADPVSPDAIALFAEGVYLRNETDK TRPAQLEILGECEARLTIHEGKYHQVKRMFASIGNKVVGLHRERVGGLTLDDELAPGE YRELTAEEIALF" misc_feature complement(2934379..2935062) /locus_tag="B565_2615" /note="16S rRNA pseudouridylate synthase A; Provisional; Region: PRK10839" /db_xref="CDD:182770" misc_feature complement(2934865..2935062) /locus_tag="B565_2615" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cd00165" /db_xref="CDD:29105" misc_feature complement(order(2934937..2934939,2934943..2934966, 2934985..2934987,2934991..2934996,2935003..2935008, 2935012..2935017,2935021..2935026,2935057..2935059)) /locus_tag="B565_2615" /note="RNA binding surface [nucleotide binding]; other site" /db_xref="CDD:29105" misc_feature complement(2934382..2934882) /locus_tag="B565_2615" /note="PseudoU_synth_RsuA: Pseudouridine synthase, Escherichia coli RsuA like. This group is comprised of eukaryotic and bacterial proteins similar to Escherichia coli RsuA. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA...; Region: PseudoU_synth_RsuA; cd02553" /db_xref="CDD:30010" misc_feature complement(order(2934502..2934504,2934757..2934768)) /locus_tag="B565_2615" /note="active site" /db_xref="CDD:30010" misc_feature complement(order(2934502..2934513,2934667..2934669)) /locus_tag="B565_2615" /note="uracil binding [chemical binding]; other site" /db_xref="CDD:30010" gene 2935231..2936430 /locus_tag="B565_2616" /db_xref="GeneID:10488533" CDS 2935231..2936430 /locus_tag="B565_2616" /codon_start=1 /transl_table=11 /product="metal-dependent phosphohydrolase with HD domain" /protein_id="YP_004393268.1" /db_xref="GI:330830316" /db_xref="GeneID:10488533" /translation="MKSQASYPVIPVNQLKPGMYVIAIASQTGGMEIAQMGLVTSVAQ IANLVRQGVLTVRIDLARSKLGSAESDAVTSPDLNANSAQVGRRASANGEGRELKIRR LYQEARELQGKFIRHLKAGEPIDITPLAEVAEEMVDTMFTHGDAMLCLARIRAKDAYL MEHSMNVAILLANFGRYLGLERSVLKELTLGGLLHDVGKIMTPDEVLHKPGKLTDEEF AIMRQHVVHSYEILSNTPGITPTMLEVAANHHERLDGSGYPQRLKGEQLSLYTRMSGI VDVYDAITADRVYKAGMQPTQAFRILLKGINQHFDAELVTKFIKCMGVYPVGTLVQLS NQRLAIVMQRNEQQPLKPVVKVIYHATQRHYLDVQWLDLAKSGVQESIENTVDPKEFG INLANFF" misc_feature 2935258..2935623 /locus_tag="B565_2616" /note="Domain of unknown function (DUF3391); Region: DUF3391; pfam11871" /db_xref="CDD:152307" misc_feature 2935714..2936100 /locus_tag="B565_2616" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature order(2935717..2935719,2935813..2935818,2936062..2936064) /locus_tag="B565_2616" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature 2935816..2935818 /locus_tag="B565_2616" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene complement(2936449..2936628) /locus_tag="B565_2617" /db_xref="GeneID:10488534" CDS complement(2936449..2936628) /locus_tag="B565_2617" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393269.1" /db_xref="GI:330830317" /db_xref="GeneID:10488534" /translation="MSDHLLLPHGEDLRRAVLWLSEHHQHDIAAIEEASLRFDLSPLD EEFLIRHWLDRQRQS" gene complement(2936760..2937413) /locus_tag="B565_2618" /db_xref="GeneID:10488535" CDS complement(2936760..2937413) /locus_tag="B565_2618" /codon_start=1 /transl_table=11 /product="transaldolase" /protein_id="YP_004393270.1" /db_xref="GI:330830318" /db_xref="GeneID:10488535" /translation="MELYLDTADVAAVRRWSRILPLAGVTTNPSITAAGGLPLCELLP ALRDVLGPKARLFAQVMAKTETEMVREAFALRELDPDLVIKIPVCVEGLAAIKSLTAN GVPTLGTAVYTPLQGWLAAVAGAEYVAPYVNRLDAQGGDGIATVQELQQLLALHAPNS KVLAASFRTPRQALDCLLAGCQSITLPLDVAEQLLNVPAVDAALEKFDQDWLRAFGR" misc_feature complement(2936781..2937410) /locus_tag="B565_2618" /note="Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea; Region: Transaldolase_FSA; cd00956" /db_xref="CDD:188643" misc_feature complement(order(2936919..2936921,2937021..2937023, 2937159..2937161,2937330..2937335,2937396..2937398)) /locus_tag="B565_2618" /note="active site" /db_xref="CDD:188643" misc_feature complement(order(2936781..2936786,2936790..2936795, 2936805..2936807,2936814..2936819,2936823..2936825, 2936871..2936873,2936880..2936885,2936901..2936903, 2936907..2936909,2936946..2936951,2937000..2937002, 2937006..2937008,2937015..2937017,2937021..2937023, 2937066..2937068,2937123..2937125,2937132..2937137, 2937141..2937143,2937201..2937203,2937219..2937221, 2937237..2937239,2937294..2937296,2937306..2937308, 2937315..2937317,2937324..2937329,2937354..2937356, 2937363..2937365)) /locus_tag="B565_2618" /note="intersubunit interactions; other site" /db_xref="CDD:188643" misc_feature complement(2937159..2937161) /locus_tag="B565_2618" /note="catalytic residue [active]" /db_xref="CDD:188643" gene 2937542..2938438 /locus_tag="B565_2619" /db_xref="GeneID:10488536" CDS 2937542..2938438 /locus_tag="B565_2619" /codon_start=1 /transl_table=11 /product="pyruvate formate-lyase 2-activating enzyme" /protein_id="YP_004393271.1" /db_xref="GI:330830319" /db_xref="GeneID:10488536" /translation="MIFDLQRYSTHDGPGIRTLVFLKGCSLACLWCQNPESRSPKQDI LLDRRQCIEGCQLCSQACPAILRDSEGIQLNRSALKADDMERLRGLCPSEALQVCGRD ETLDTLMDTILRDRPFFERSGGGVTLSGGEPFMQPDFAAALLARCKAEGLHTAVESCL HVPWHQIEPSLPSLDLVLADLKHVDKERFFHWTRGKVELPIANLKRLAERGVPMQIRV PLIPGFNADHASIEAITDTAASLGTVQEIHFLPYHTLGMGKYALLDLPYQAPDAPLDD PDLLRFAHAYAQRQGLTPVTRG" misc_feature 2937545..2938321 /locus_tag="B565_2619" /note="glycyl-radical enzyme activating protein family; Region: PFLE_PFLC; TIGR02494" /db_xref="CDD:162887" misc_feature 2937839..2938225 /locus_tag="B565_2619" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene 2938443..2940878 /locus_tag="B565_2620" /db_xref="GeneID:10488537" CDS 2938443..2940878 /locus_tag="B565_2620" /codon_start=1 /transl_table=11 /product="formate acetyltransferase 3" /protein_id="YP_004393272.1" /db_xref="GI:330830320" /db_xref="GeneID:10488537" /translation="MTQLDLNTLSPRIRAHKESLIHIVQPPVCTERARHYTEAYQAHL ARPLPVRRALALAHHLKQRTIWIKHDELIVGNQASQVRAAPLFPEYTVSWIEKEIDEL ADRPGAGFAVSETDKEIIHALTPFWRGQTVQDRCFGLFTDEQKALLESGIIKAEGNMT SGDAHLAVNYEELLTLGLDGFKAKVAERRSWLDLADWADLQREQFLHAVAITLEAVSD HIGRYATLASNMARDMTAQEPRRSELETIALNCAHIAHQPPETFWQALQLCYFIQLIL QIESNGHSVSFGRMDQYLYPWYRREVELSESLSRPRAIELLQGCWLKLLEVNKIRSGT HSKASAGSPLYQNVTIGGQNWRDGAAHDAVNGLSYAILESCGQLRSTQPNLSVRYHAG MSEDFLDACIQVIRCGFGMPAFNNDEVVIPEFIKLGVSVEDAHHYAAIGCIETAVPGK WGYRCTGMSFINFARILLASLDGGRDATTGKVFLPQPQSLRDGSFGNFDEVMARWDEQ VRYFTRKSIEIDCVVDSVLEAQAHDILCSTLVDDCIERGKTIKQGGAVYDWVSGLQVG IANLGNSLAALKKLVFEQGIVEQQELAEALEQDFAGLAGEQLRQRLTNAAPKYGNDLD EVDLLLVQAYQSYIDELKELHNTRFGRGPIGGTYYAGTSSISANVPFGAATMATPDGR RARTPLAEGASPSSGSDRLGPTAVFNSIGKLPTAAILGGVLLNQKLSPASLENERDKA KLMSLLRTFFEVHKGWHVQYNIVSRETLLAAKAHPDQYRDLVVRVAGYSAFFTALSPD AQDDIIARTEHSL" misc_feature 2938464..2940875 /locus_tag="B565_2620" /note="pyruvate formate-lyase; Region: PFL2-3; TIGR01774" /db_xref="CDD:162527" misc_feature 2938470..2940866 /locus_tag="B565_2620" /note="Pyruvate formate lyase 2 and related enzymes; Region: PFL2_DhaB_BssA; cd01677" /db_xref="CDD:153086" misc_feature order(2938572..2938583,2938824..2938832,2938842..2938847, 2938854..2938865,2939040..2939045,2939049..2939054, 2940003..2940005,2940015..2940017,2940030..2940032, 2940369..2940377,2940399..2940401) /locus_tag="B565_2620" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:153086" misc_feature order(2938935..2938937,2939289..2939294,2939457..2939459, 2939475..2939477,2939763..2939768,2939772..2939774, 2939811..2939813,2940429..2940431,2940435..2940437) /locus_tag="B565_2620" /note="active site" /db_xref="CDD:153086" misc_feature 2940792..2940806 /locus_tag="B565_2620" /note="glycine loop; other site" /db_xref="CDD:153086" gene 2940973..2941719 /locus_tag="B565_2621" /db_xref="GeneID:10488538" CDS 2940973..2941719 /locus_tag="B565_2621" /codon_start=1 /transl_table=11 /product="putative HTH-type transcriptional regulator YciT" /protein_id="YP_004393273.1" /db_xref="GI:330830321" /db_xref="GeneID:10488538" /translation="MNPRHQLILTLVHQARKMSVSELSRHTGVSEVTVRNDLTALEKQ GLLRRVHGSAMALETDDPDARMNINYLLKERLAERAAQLVEDGETVFIEGGSANAMLA RHLALHKRVTIITISSYIAHLLKDTPAQVVLLGGLFQHQSESVVGPLTRLCIEQVHFS KAFIGVDGFHPEMGFTGRDMMRADVVNSVLAKGMTNVVITDSSKFGAIHPSQLGAPGQ INVLVTDDALPAPMRAAIAAKGITLHCVAA" misc_feature 2940973..2941710 /locus_tag="B565_2621" /note="Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]; Region: GlpR; COG1349" /db_xref="CDD:31540" misc_feature 2940982..2941134 /locus_tag="B565_2621" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 2941189..2941647 /locus_tag="B565_2621" /note="SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to...; Region: SugarP_isomerase; cl00339" /db_xref="CDD:193777" gene 2941881..2942774 /locus_tag="B565_2622" /db_xref="GeneID:10488539" CDS 2941881..2942774 /locus_tag="B565_2622" /codon_start=1 /transl_table=11 /product="drug/metabolite exporter (DME) family transporter" /protein_id="YP_004393274.1" /db_xref="GI:330830322" /db_xref="GeneID:10488539" /translation="MQTKDKCLAALVILCWGLNFVAIKCGLEGIPPLLLGALRFIGVV FPAILLVPKPAMPWRWLLAYGGAISLGQFAFLFCAMNFGMPAGMASLVLQSQVVFTLL FAMIWLGERWQPHHWVALPLAGGGLYLIATHGEGNLTLLGFILTLCAAACWGLGNVIN RQIGLRYQTTLPSLIAWGGLVPIVPFFALSWQFEGPELMASSLLNFSWQGLLCVLYLS YVATWLGYGLWGRLLMRYPVAQVAPLSLLIPCVGMVAAALLLDEHPTALQWLGSALVL LGFVVHLLGSRLCGFKPQSAT" misc_feature 2941881..2942699 /locus_tag="B565_2622" /note="O-acetylserine/cysteine export protein; Provisional; Region: PRK11453" /db_xref="CDD:183142" misc_feature 2941920..2942276 /locus_tag="B565_2622" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" misc_feature 2942334..2942693 /locus_tag="B565_2622" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene 2942904..2944754 /locus_tag="B565_2623" /db_xref="GeneID:10488540" CDS 2942904..2944754 /locus_tag="B565_2623" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter periplasmic protein" /protein_id="YP_004393275.1" /db_xref="GI:330830323" /db_xref="GeneID:10488540" /translation="MPSTITAGVRRLSPIIRATAITLTLCCSPFGWSATLPADLKWES NNQDPLYADPAAKRGGTFRTFMTSFPLTLRKYGPDSNGAFAGYVRETNLPLLSTHPVT GNPMPMLANEWAFGADNKTLYFRINPKARWSDGQPVTADDWLFTLKMMRSKEINDPWY NNYYSTQIADITKFDDHTLAITSGTEKSRQDLLESLPISPEPSHAIKLTANWVKEYNW KVLPVTGPYQIDQVKKGKSVTFKRIENWWGDDERYFQHRFNPARIEIKVLRDLNIAWQ HFLRGDLDTFPLVMPNWWHDKTKTAEFEKGYIARTWFYNQTPQSPMGLYLNTADPQLN NLDVRLGIQHALNLDKMLTTLLRGDYQRLNSYGSGQGEFTNSEIKARPFDPKLAREYF AKAGFNKVGPQGILQNDKGQSLTLAITYTTAEHAQRLTLLREEAKKAGLNLELNLMDA SAGFKSMLEKKHQSAWMAWAGSRYPAYWEFFHKVNANKPQTNNIMNIDDDAITALVEQ YDKEFDFAKKAALSRQIQQRLYELASFVPAYQVPYTREGAWRWIKLPKVPATPKSEQL YWPLGGDNSGYSYGGLLWIDEELKTETRAAIKSGKTFPAEPIIDTTYRQP" misc_feature 2943036..2944568 /locus_tag="B565_2623" /note="The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold; Region: PBP2_NikA_DppA_OppA_like_14; cd08497" /db_xref="CDD:173862" misc_feature 2943213..2944367 /locus_tag="B565_2623" /note="Bacterial extracellular solute-binding proteins, family 5 Middle; Region: SBP_bac_5; pfam00496" /db_xref="CDD:189574" gene complement(2944849..2945241) /locus_tag="B565_2624" /db_xref="GeneID:10488541" CDS complement(2944849..2945241) /locus_tag="B565_2624" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393276.1" /db_xref="GI:330830324" /db_xref="GeneID:10488541" /translation="MSYELSDTERNAALQLNADYRYDHFISKLVEHEELFVLTDEHGV MMLTTDDEDCIPVWPHPEYAKAWAEGEWADCKPQSITLKVWLERWVDGMEQDELCVAV FPTPDQEGIVLEPADVADAIAEKQAKRG" misc_feature complement(2944873..2945181) /locus_tag="B565_2624" /note="Protein of unknown function (DUF2750); Region: DUF2750; pfam11042" /db_xref="CDD:192700" gene complement(2945401..2945949) /locus_tag="B565_2625" /db_xref="GeneID:10488542" CDS complement(2945401..2945949) /locus_tag="B565_2625" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393277.1" /db_xref="GI:330830325" /db_xref="GeneID:10488542" /translation="MVKITLVSLLHSLCTRFPVYPAASLTSLLDAHQGEVWLPARKGA DIALLRKHAKEAHELASLDAGWCDFAASDSGDTPKLDALANYDSEMMDNLLMYWHTAA KINSPITDNLFELRREVVDEAHGAKLAAAWEQQQQLRFEQLMAMAANGRDLLCFVEVE SAYWLRQKLSEQPDVELITPAL" gene 2946195..2946443 /locus_tag="B565_2626" /db_xref="GeneID:10488543" CDS 2946195..2946443 /locus_tag="B565_2626" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393278.1" /db_xref="GI:330830326" /db_xref="GeneID:10488543" /translation="MIGIDQVSNEFVNDLKILACFDPANMSLGIKLRSDMSEELCQAA ARLHQQGLISAEDGGYLTPFGMTMVEHLQHLLVALKPL" misc_feature 2946216..2946434 /locus_tag="B565_2626" /note="Phosphate-starvation-inducible E; Region: PsiE; cl01264" /db_xref="CDD:194088" gene complement(2946430..2946663) /locus_tag="B565_2627" /db_xref="GeneID:10488544" CDS complement(2946430..2946663) /locus_tag="B565_2627" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393279.1" /db_xref="GI:330830327" /db_xref="GeneID:10488544" /translation="MEAQVICQQFVQVRMGTAQQPDEVNARLVPEREGEWLVDGKVKG PEGPLLFACHLHQGERWELLNFSLWAPQPLKAV" gene complement(2946826..2947026) /locus_tag="B565_2628" /db_xref="GeneID:10488545" CDS complement(2946826..2947026) /locus_tag="B565_2628" /note="RNA chaperone, transcription antiterminator, affects expression of rpoS and uspA" /codon_start=1 /transl_table=11 /product="Cold shock-like protein cspE" /protein_id="YP_004393280.1" /db_xref="GI:330830328" /db_xref="GeneID:10488545" /translation="MITGTVKFFNETKGFGFIQQENGPDVFVHFSAIQGNGFRTLAEG QRVQFSVTQGQKGPQAENVTAL" misc_feature complement(2946835..2947023) /locus_tag="B565_2628" /note="Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein...; Region: CSP_CDS; cd04458" /db_xref="CDD:88424" misc_feature complement(order(2946859..2946861,2946946..2946948, 2946976..2946978,2947003..2947005)) /locus_tag="B565_2628" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:88424" misc_feature complement(order(2946940..2946951,2946967..2946987)) /locus_tag="B565_2628" /note="RNA-binding motif; other site" /db_xref="CDD:88424" gene complement(2947244..2948344) /locus_tag="B565_2629" /db_xref="GeneID:10488546" CDS complement(2947244..2948344) /locus_tag="B565_2629" /codon_start=1 /transl_table=11 /product="pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component" /protein_id="YP_004393281.1" /db_xref="GI:330830329" /db_xref="GeneID:10488546" /translation="MKFFKLPDLGEGLAEAEIVEWKVSAGDTVTVDQVLLSVETAKAL VDVPSPVAGVIARLCGAEGDILHIGAPLVEFEGGEDDGTVVGKVSAHQQHIEDHFVVG AIAPGGALVQAMPAVRLLAQKLGVDIDRIKGSGSGGMVTELDVQQAFESQQSSGNEFL KGSRRAMAKAMELSHQTVVPVSITDEVDLRHWRPDEDVTVRLIKAIGVACRAEPSMNA WFDGDTLSRRLFKEVNVAIAVDSKHGLYVPVMENVAEREGTDIRQGLDRMIADVKARA VPREMLLGATITLTNFGAIAGRYASPIVTPPQVAIIGAGKLFEKVVFIHGEARPVRAL PLSMTFDHRACTGGEAARFLRALVEALEAATL" misc_feature complement(2947247..2948344) /locus_tag="B565_2629" /note="branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed; Region: PRK11856" /db_xref="CDD:183339" misc_feature complement(2948120..2948335) /locus_tag="B565_2629" /note="Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid...; Region: lipoyl_domain; cd06849" /db_xref="CDD:133458" misc_feature complement(order(2948201..2948203,2948213..2948230, 2948249..2948251)) /locus_tag="B565_2629" /note="E3 interaction surface; other site" /db_xref="CDD:133458" misc_feature complement(2948219..2948221) /locus_tag="B565_2629" /note="lipoyl attachment site [posttranslational modification]; other site" /db_xref="CDD:133458" misc_feature complement(2947907..2948014) /locus_tag="B565_2629" /note="e3 binding domain; Region: E3_binding; pfam02817" /db_xref="CDD:111687" misc_feature complement(2947259..2947867) /locus_tag="B565_2629" /note="2-oxoacid dehydrogenases acyltransferase (catalytic domain); Region: 2-oxoacid_dh; cl02008" /db_xref="CDD:194225" gene complement(2948341..2949327) /locus_tag="B565_2630" /db_xref="GeneID:10488547" CDS complement(2948341..2949327) /locus_tag="B565_2630" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase E1 component subunit beta" /protein_id="YP_004393282.1" /db_xref="GI:330830330" /db_xref="GeneID:10488547" /translation="MSEISLLEAVNMALHYEMEHDPDVVVLGEDVGVNGGVFRATVGL RDKFGFKRVIDTPLAEGLIAGVAVGMATQGLKPVAEFQFQGFIFPGMEQIICQAARMR NRTRGRLSCPLVYRSPYGAGIHSPEHHSESVEALFAHIPGLRVVIPSSPRRAYGLLLS AIRDPDPVMFFEPDRIYRSMKSEVVDDGVGLPLDVCFTLRPGRDITVVAWGACIQEVM RAANLLAEQDIQCEVLDLATIKPLDMETILTSVRKTGRLLVVHEACGSFGVGAEIVAR VTEQALPSLKAPPKRLTGVDAAVPYYRNEAYYLITEQDIADAAHQLMEKQWL" misc_feature complement(2948353..2949321) /locus_tag="B565_2630" /note="Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]; Region: AcoB; COG0022" /db_xref="CDD:30372" misc_feature complement(2948809..2949306) /locus_tag="B565_2630" /note="Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins; Region: TPP_PYR_E1-PDHc-beta_like; cd07036" /db_xref="CDD:132919" misc_feature complement(order(2948830..2948835,2948896..2948901, 2948944..2948946,2948953..2948955,2949019..2949024, 2949049..2949054,2949061..2949063,2949118..2949126, 2949130..2949135,2949142..2949159,2949163..2949165, 2949172..2949174,2949238..2949240,2949256..2949258, 2949262..2949264)) /locus_tag="B565_2630" /note="alpha subunit interface [polypeptide binding]; other site" /db_xref="CDD:132919" misc_feature complement(order(2949061..2949063,2949070..2949072, 2949148..2949150,2949154..2949156,2949241..2949243)) /locus_tag="B565_2630" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132919" misc_feature complement(order(2948905..2948907,2948911..2948916, 2948920..2948922,2948944..2948949,2948953..2948955, 2949019..2949021,2949028..2949030,2949040..2949042, 2949055..2949057,2949061..2949066,2949148..2949159, 2949163..2949165,2949238..2949240)) /locus_tag="B565_2630" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:132919" misc_feature complement(2948383..2948733) /locus_tag="B565_2630" /note="Transketolase, C-terminal domain; Region: Transketolase_C; pfam02780" /db_xref="CDD:145764" gene complement(2949320..2950456) /locus_tag="B565_2631" /db_xref="GeneID:10488548" CDS complement(2949320..2950456) /locus_tag="B565_2631" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase E1 component subunit alpha" /protein_id="YP_004393283.1" /db_xref="GI:330830331" /db_xref="GeneID:10488548" /translation="MGVTSIGDAHNGKEPVMTHVDIPFLRYLDAEGCPVATLPTWLDK AILHTFYRNMVMVRSYDKKAIALQRTGKLGTFPSHLGAEAVGIGIGLAMQPQDVYVPY YRDMPTLYVRGVPMEKNLQYWGGDERGSYFLKPDGTPSEDLPICVPIATQITHACGIA SAFKLRNQPRVAVVTIGDGGTSKGDFLEGLNCAGVWHLPMVIIVNNNQWAISVPRKLQ SSAPTLAQKGIGAGVRSLQVDGNDVVAVYDAARSAVERARSGKGPTLIEAVSYRLGDH TTADDATRYRDGAEVEAAWAKEPVKRLRQFMHSQGWWDEEQEQSLLAEATREVEQAVA RYEVMAPQPPEAMLDYHYASLPAELVPQRERVIAKGMKQEVGHE" misc_feature complement(2949365..2950390) /locus_tag="B565_2631" /note="Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]; Region: AcoA; COG1071" /db_xref="CDD:31269" misc_feature complement(2949449..2950309) /locus_tag="B565_2631" /note="Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain...; Region: TPP_E1_PDC_ADC_BCADC; cd02000" /db_xref="CDD:48163" misc_feature complement(order(2949605..2949607,2949617..2949619, 2949761..2949763,2949776..2949778,2949818..2949829, 2949872..2949874,2949884..2949886,2949896..2949898, 2949905..2949916,2949920..2949922,2950013..2950018, 2950082..2950084,2950235..2950237)) /locus_tag="B565_2631" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:48163" misc_feature complement(order(2949629..2949631,2949830..2949832, 2949836..2949838,2949917..2949928,2950010..2950012, 2950016..2950018,2950145..2950150)) /locus_tag="B565_2631" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:48163" misc_feature complement(order(2949872..2949874,2949881..2949886, 2949902..2949907,2949962..2949964,2949971..2949976, 2949980..2949985,2949992..2949997,2950004..2950006, 2950019..2950021,2950025..2950027,2950031..2950033)) /locus_tag="B565_2631" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:48163" misc_feature complement(order(2949560..2949568,2949590..2949622, 2949626..2949646)) /locus_tag="B565_2631" /note="phosphorylation loop region [posttranslational modification]" /db_xref="CDD:48163" gene complement(2950677..2951546) /locus_tag="B565_2632" /db_xref="GeneID:10488549" CDS complement(2950677..2951546) /locus_tag="B565_2632" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393284.1" /db_xref="GI:330830332" /db_xref="GeneID:10488549" /translation="MTPVAAIREALLAGKLVGLGEPHWHPDFIRRQHAWLCDPALWGV MTDLVLECGNRRHQSLLDAWLTGEKSWQDEPLTLARLYPVWLDSCAFPAWMAPEFPAL FSALRQSNLVRPEHVRLRVHLCEPSFEWQELTPERWQLHNRGRDQALADYLLALPARG VVVLAGARHLLKVAGDPHFAQPTLGQLLEAARPGWLQVLHPWPMADGKGDEKEERVCE LAGIATADLYPHWPAHPPLETLIDRLVRVADRGREMRICPTLLAEPWRSRLLSRAHLL PAGMARQLQQWLA" gene complement(2951543..2955532) /locus_tag="B565_2633" /db_xref="GeneID:10488550" CDS complement(2951543..2955532) /locus_tag="B565_2633" /codon_start=1 /transl_table=11 /product="Enterobactin synthetase component F" /protein_id="YP_004393285.1" /db_xref="GI:330830333" /db_xref="GeneID:10488550" /translation="MEQTMAMRATQQRGEQPRWPLTTAQAGIWFAQQKYPQSPACNTG EYWLLEGALAPHHFTRAVRQTIDEIPGLHCAFVATVDGPQMVANPACWQLTERDLRSE ADPLAVAQVEMRAQLAVPFNLAGGPLFATTLYRLGERRWAWFIAVHHIAIDGFGLSLL CQRVANWYEALCAGEQPAPCRYASQQELLAEEAAYQDSPRAARDRDFFVQQLTGVETP ASLSRHPVQGPGPTYRLEQRLAGRQWQALVERATRSACHPYSLLLAAVASYVQRMSGA GEVVLGIPLMGRLGSVAADTPCMKVNVVPLRIELSGTSRVGELLVQVERQFAALRRHQ GCRQEWLQQRQPGQPLFGPQVNLMPFARTLSFGEGHNQVRGEVQVLAAGPVEECAFYF AEEAGAMTLTLEAHQGRFSQQESERHLARLVAYLAAWSEAADETLAVRLPLLLPCEQA ELTRWNQTDHPLPTTTLSALLAEGLAAADQSAIALECGAERWSVAELRQRTRQLASYL AGRGVGPCCRVAVVIPRAPELILAQQAIMAVGAVYVPVDPDYPAERIGYILASSDPAL VLTSRTLRMPLDMAAPLVCLDAPGVAEQLAAVELATTAPCDLPAPKPEDAAYIIYTSG STGRPKGVVVSHGAIVNRLLWMQHMYPIGPADRVLQKTPAGFDVSIWEFFWPFMTGAR LVLAKPGGHKDPAYLAELIELAGITTLHFVPSMLQIFVTQAEPARCRALRQVFCSGEA LPADLVQRWYGAFSAPLHNLYGPTEAAVDVTWYPCRADEAVTSVPIGYPVWNTCIHIL DPWLQPVPPGVAGELWIGGVQVAEGYFGQPELTAERFIANPFGAGRLYRSGDLAAWRE DGAIEYLGRLDFQVKIRGQRIELEEIEQVLLRHPRVAQAVVLAPEFAPGDRRLVAYVV TADSRDMTLAELTPALGAALPDYMVPGLLVNLAELPLTPNGKLDRKGLPLPDMASAVG QSLPKNLLEERLCRLFAEILGLARVGADDNFFALGGHSLLAAQLVVRIEESIGQDLTL ASLFEAPSPAQLARRLGGEREAMPMLLPLRAPGAQSGVSGPTLFCVHPAGGLGWCYAP LVPHLPTDMAVYALQARALCQPNAPLPASFDELALDYVTELHRQQSEGPYWLLGWSLG GMLVHRMAAMLQEQGQEVAMVLLLDAYPCQQWQTQPLPDEQRMLDALLRMGGIAVADE ALDSLTRDDVVARLGAEGSALAMLDEQVVSAMIELVGHNNRLIREPVDYCYHGEVIFI EASASRQPWLDGRGWEPLTKGDIRYERFPCLHQEMVHPDWLAKIGALICERVDGVGQQ PYIRQEGDA" misc_feature complement(2951594..2955481) /locus_tag="B565_2633" /note="enterobactin synthase subunit F; Provisional; Region: entF; PRK10252" /db_xref="CDD:182335" misc_feature complement(2954600..2955475) /locus_tag="B565_2633" /note="Condensation domain; Region: Condensation; cl09290" /db_xref="CDD:197435" misc_feature complement(2952662..2954062) /locus_tag="B565_2633" /note="Acyl-protein synthetase, LuxE; Region: LuxE; cl10450" /db_xref="CDD:186997" misc_feature complement(2952395..2952589) /locus_tag="B565_2633" /note="Phosphopantetheine attachment site; Region: PP-binding; cl09936" /db_xref="CDD:195933" misc_feature complement(<2951936..2952322) /locus_tag="B565_2633" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" gene complement(2955658..2956419) /locus_tag="B565_2634" /db_xref="GeneID:10488551" CDS complement(2955658..2956419) /locus_tag="B565_2634" /codon_start=1 /transl_table=11 /product="Enterobactin synthetase component A" /protein_id="YP_004393286.1" /db_xref="GI:330830334" /db_xref="GeneID:10488551" /translation="MSEWQGRTIWVTGAAQGIGHAVARTFAEAGASVVALDLQLAEAL PGNVKGVVIDVSDSEAVTRCCEQLLDEGLGPDVLVNVAGVLATGRLDEVDDALLLRTF AINTFAPFYLMRALTPWFQGRRRGAIVNVSSNAGRVPRVGMGIYGASKAALTSLTQTA GLELAPFGVRCNLVSPGSTRTPMLYGMWQEGEQREGELRTIAGLPGQFKLGIPLGKLG TPDEVAACVLFLASDAASHITLQDLVVDGGATLGG" misc_feature complement(2955667..2956407) /locus_tag="B565_2634" /note="3-ketoacyl-(acyl-carrier-protein) reductase; Validated; Region: fabG; PRK05653" /db_xref="CDD:180183" misc_feature complement(2955664..2956395) /locus_tag="B565_2634" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(order(2955883..2955894,2955970..2955972, 2955982..2955984,2956021..2956029,2956171..2956179, 2956306..2956311,2956366..2956368,2956372..2956377, 2956381..2956383)) /locus_tag="B565_2634" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature complement(order(2955970..2955972,2955982..2955984, 2956021..2956023,2956105..2956107)) /locus_tag="B565_2634" /note="active site" /db_xref="CDD:187535" gene complement(2956416..2957348) /locus_tag="B565_2635" /db_xref="GeneID:10488552" CDS complement(2956416..2957348) /locus_tag="B565_2635" /codon_start=1 /transl_table=11 /product="isochorismatase" /protein_id="YP_004393287.1" /db_xref="GI:330830335" /db_xref="GeneID:10488552" /translation="MTIQSLAAYPLPTAEELPTGRVNWPFEPGRAALLVHDMQHYFVD FYGADNPLINQVIDHIATLIRQARILGMPVVYTAQPAEQSQADRALLNDMWGPGLTRA PERQPIVPALAPGPQDTVLTKWRYSAFCRSPLAELMAEWGRDQLVICGIYGHIGVMQT AVDAFMRDIRPFLVADAIADFSREDHLLALSYVSRNAGRVITVAEVMAASKRPLTRES LRDLVLARLPAEMQQEQPTEDDNLLDYGLDSLAVMGLVEEWRQQGLVVELAELARTPT LAHWWALLSRQLHVSQATAYQANEEHVSEPECTP" misc_feature complement(2956737..2957345) /locus_tag="B565_2635" /note="Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It...; Region: cysteine_hydrolases; cl00220" /db_xref="CDD:185838" misc_feature complement(2956737..2957258) /locus_tag="B565_2635" /note="Isochorismatase family; Region: Isochorismatase; pfam00857" /db_xref="CDD:189743" misc_feature complement(order(2956881..2956883,2956980..2956982, 2957238..2957240)) /locus_tag="B565_2635" /note="catalytic triad [active]" /db_xref="CDD:29548" misc_feature complement(2956893..2956898) /locus_tag="B565_2635" /note="conserved cis-peptide bond; other site" /db_xref="CDD:29548" misc_feature complement(2956482..2956679) /locus_tag="B565_2635" /note="Phosphopantetheine attachment site; Region: PP-binding; cl09936" /db_xref="CDD:195933" gene complement(2957345..2958991) /locus_tag="B565_2636" /db_xref="GeneID:10488553" CDS complement(2957345..2958991) /locus_tag="B565_2636" /codon_start=1 /transl_table=11 /product="Enterobactin synthetase component E" /protein_id="YP_004393288.1" /db_xref="GI:330830336" /db_xref="GeneID:10488553" /translation="MKPLVPFTPWPAELAAHYRAQGWWRGQPLTALLDESAARYPERT ALICGERTLSYGQLKREVDALAARLAARGLGHGDTALVQLPNCAEFYICWFALIRCGV VAVHALYSHQRRELVAFARQIEPALLVLSPSHPGFAGEAGSLVALDELVAPSCQTLFF EQAEGSDLQSGFAWRRPDPIARADGSPLTATAPTPTPADQVAFFQLSGGSTGTPKLIP RTHDDYGYSVRQSVAVCGWDERVIYLCALPAPHNFPLSSPGALGVFYAGGCVVLAKDP SAVTCLPLVQRHQINWAALVPPALALWLEAASHYPQTSLECVQVGGARLSPVHAEAVA SRLDCRLQQVFGMAEGLVNYTRTEDDQWYIVNTQGRPMSPGDEVEVRDSDGRPLPDGE CGELWTRGPYTFRGYFKADVHNQRAFDRDGFYCTGDLVCRLPSGHLMVVGRNKDQINR GGEKIDALEIEELLLTHPEVRQAALVAMPDPMLGERSCAFLMCREPLNLPRLRRFLRE QGVADYKLPDRLVLVEQLPHTPVGKIDKQTLREQLVKECA" misc_feature complement(2957360..2958982) /locus_tag="B565_2636" /note="enterobactin synthase subunit E; Provisional; Region: entE; PRK10946" /db_xref="CDD:182857" misc_feature complement(2957363..>2958055) /locus_tag="B565_2636" /note="Acyl-protein synthetase, LuxE; Region: LuxE; cl10450" /db_xref="CDD:186997" gene complement(2958988..2960136) /locus_tag="B565_2637" /db_xref="GeneID:10488554" CDS complement(2958988..2960136) /locus_tag="B565_2637" /codon_start=1 /transl_table=11 /product="isochorismate synthase DhbC" /protein_id="YP_004393289.1" /db_xref="GI:330830337" /db_xref="GeneID:10488554" /translation="MCDHALEGEWPAATAGLDKVCCFASGDRVLVASGIHDSFTGIPP EKLLAHLRQLRQQGMVNPIAIGAIPFDTQSPWHLVIPAQSQWVARDAMLPASCCQLHG EVSEVTGSAHYQGAVRAALQQFSEGQLEKVVLSRAIDVQSAEQTSPAHAYGSLLAQNP GAYVFQIPLPDGETLLGASPELLVSRSEVAVVSNPLAGSRPRHAFPDQPAACVELLGA QKDRYEHALVADAVAAALAPFCRELDVPLEPQVIATPTMWHLSTRIAGRLHEPSPVLA LALALHPTPAVCGTPLSAARQAIARLEGYDRRFYCGAVGWMDADGNGEWVVTIRCGVL AGRQLRLYAGAGVVVGSSPEAEWQETAAKLGTMLRAFGLESREPEVTA" misc_feature complement(2959000..2960070) /locus_tag="B565_2637" /note="isochorismate synthase DhbC; Validated; Region: PRK06923" /db_xref="CDD:180752" misc_feature complement(2959048..2959806) /locus_tag="B565_2637" /note="chorismate binding enzyme; Region: Chorismate_bind; cl10555" /db_xref="CDD:195988" gene 2960403..2962355 /locus_tag="B565_2638" /db_xref="GeneID:10488555" CDS 2960403..2962355 /locus_tag="B565_2638" /codon_start=1 /transl_table=11 /product="ferric iron-catecholate outer membrane transporter" /protein_id="YP_004393290.1" /db_xref="GI:330830338" /db_xref="GeneID:10488555" /translation="MKSSTSRFIAPSLLATTIVTLLTQQALAASNAPQADEVITVTTT AHNTRSAPASISVITAEQIAAAPVNDLADLLRHEVGIQAEADTNGRSDIGIRGMSGKY TLVLVDGKRLSSSNALWRGGNFDNTPVPLGMIQRVEVIRGPMSALYGSDAIGGVINII TKQPGKTWQGAADADFKAIEGKDGGDQHRTNLGFTGPLTDNLLIRMNGEVYDRQAWTP TEAADGIPLIEAKQTRNFASTLSWLVDEQQRFELDYLYNQDERPLDIFRKTGNKVHSR QQQNDRNLFGLTHKGNWSWGDTTIMANYETSQIDDFNTSYSAPQQRELEENTLTLKGY TNLALANHYLTLGGEYLDRELVDAVSYKDIGGKESHSQEALFAQDEIGLTDSLTFTLG GRYDHHEIYGSHFTPRGYLVYEMNDVVTVKGGVSQAFKAPAPHQYSNGYSIESCGGSC RIYGSDKVKPETSTNYELGVIAGEGIWETSATLFYSDIDDMLTFKQLPNSTDRTWYNL EKATTKGLELTGKLDLTDDINLGANYTYLKAEGDQGQALPERPEHKANAKITWQATER VNAFVGTTYTGTQFAEQTVNKVVVLHKLPSYQTFDLGTGFKVTENFDLRLGINNLTDV RLQEKDTVFQNVEPGRSYYVSGSARF" misc_feature 2960415..2962352 /locus_tag="B565_2638" /note="Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism]; Region: FepA; COG4771" /db_xref="CDD:34384" misc_feature 2960562..2962352 /locus_tag="B565_2638" /note="TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel; Region: ligand_gated_channel; cd01347" /db_xref="CDD:73259" misc_feature order(2960562..2960591,2960619..2960648,2960679..2960696, 2960715..2960738,2960793..2960825,2960859..2960885) /locus_tag="B565_2638" /note="N-terminal plug; other site" /db_xref="CDD:73259" misc_feature order(2961327..2961329,2961372..2961374) /locus_tag="B565_2638" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:73259" gene 2962482..2963546 /locus_tag="B565_2639" /db_xref="GeneID:10488556" CDS 2962482..2963546 /locus_tag="B565_2639" /codon_start=1 /transl_table=11 /product="phospho-2-dehydro-3-deoxyheptonate aldolase, trp-sensitive" /protein_id="YP_004393291.1" /db_xref="GI:330830339" /db_xref="GeneID:10488556" /translation="MFTSLLNASPLATLPTPDEMLKARPCPARLARQIARSRQQARHI LQGEDDRLLLVIGPCSIHDPAAARDYGGRLAELQGQYGEQLQLVMRTYFEKPRTTLGW KGFIFDPDLDGSDRLEKGLSQARELLLALGQEGLACATEFLDLTSMLYLGDLISWGAI GARTTESQLHRQLASALPCPIGFKNGTDGNIWIAVEAILASRAAHLYTQPCGDGQLAL VRSHGNPDCHLILRGGRQPNYQSSHVAEAGELLRQHHLSPRLMIDCSHGNSQKQHARQ LLVARDIADQLGAGSHAIAAIMVESFICEGRQEIGSKPLRYGQSITDSCIGWEQTRQL LDMVAEGVEARRQQRIALAG" misc_feature 2962521..2963522 /locus_tag="B565_2639" /note="NeuB family; Region: NeuB; cl00496" /db_xref="CDD:186036" misc_feature 2962611..2963486 /locus_tag="B565_2639" /note="DAHP synthetase I family; Region: DAHP_synth_1; pfam00793" /db_xref="CDD:189723" gene complement(2963624..2964622) /locus_tag="B565_2640" /db_xref="GeneID:10488557" CDS complement(2963624..2964622) /locus_tag="B565_2640" /codon_start=1 /transl_table=11 /product="HTH-type transcriptional regulator GalR" /protein_id="YP_004393292.1" /db_xref="GI:330830340" /db_xref="GeneID:10488557" /translation="MATIKDVSQLANVSISTVSRVINNTAQVAPEKREAVLAAMKELN FRPNSFAQALVSKRSNCIGVLVGDLCGGPFFAQMMRGIETMVDQANKFTIVMSGNHDI ARERHAIQALLQRQCDALILHSKALPDEELSELAAGSTPIVFINRQVPGAEDRCVWLD NQAGITTACQHLLDAGHRNIAFITSDDEEFVDGQQRMAGYTQTLARAGIAFDPALVSR AYADENGGYVAMSELLARGVEFTAVLGFNDGMVAGAISCLLERGYKIPQQVSVVGFDD IPYARYIYPKLTTVRYPIEEMGSRAAELALRLLDHKPVDGLALKFEAQLVERESVA" misc_feature complement(2963627..2964619) /locus_tag="B565_2640" /note="Transcriptional regulators [Transcription]; Region: PurR; COG1609" /db_xref="CDD:31797" misc_feature complement(2964455..2964610) /locus_tag="B565_2640" /note="Helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators; Region: HTH_LacI; cd01392" /db_xref="CDD:143331" misc_feature complement(order(2964458..2964463,2964467..2964472, 2964479..2964481,2964488..2964490,2964527..2964529, 2964536..2964541,2964554..2964556,2964563..2964568, 2964572..2964586,2964608..2964610)) /locus_tag="B565_2640" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature complement(2964461..2964490) /locus_tag="B565_2640" /note="domain linker motif; other site" /db_xref="CDD:143331" misc_feature complement(2963633..2964442) /locus_tag="B565_2640" /note="Ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism; Region: PBP1_GalS_like; cd06270" /db_xref="CDD:107265" misc_feature complement(order(2963774..2963779,2963855..2963857, 2963951..2963956,2964278..2964280,2964290..2964292, 2964332..2964334,2964338..2964349,2964374..2964376, 2964383..2964385,2964398..2964400,2964419..2964421, 2964440..2964442)) /locus_tag="B565_2640" /note="dimerization interface (closed form) [polypeptide binding]; other site" /db_xref="CDD:107265" misc_feature complement(order(2963798..2963800,2963882..2963884, 2963960..2963962,2964035..2964037,2964254..2964256, 2964401..2964403)) /locus_tag="B565_2640" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:107265" gene complement(2964800..2966701) /locus_tag="B565_2641" /db_xref="GeneID:10488558" CDS complement(2964800..2966701) /locus_tag="B565_2641" /codon_start=1 /transl_table=11 /product="Soluble lytic murein transglycosylase" /protein_id="YP_004393293.1" /db_xref="GI:330830341" /db_xref="GeneID:10488558" /translation="MKAVWGIVLSALFVPTLMAQTADQTLYRQAYDAVRANDQARFQQ IRARLTHYPLLPYLDYYQLAFRPGAADYNDVTRFIRQHGDTPQSNRLERSYLTYLAQS QQWSQFLRFYPAKPSSTDLLCMHYQALYYTGKPKEALQGAGKIWMSGQSRPDACSPLF QLWQASGQRTQEKIWQRMTLAFEAENPNLIRHLGATLGSGLQSYGDQMVTLFEQPAKA MNPAYFSSNPYSRKLLSLGLTRYANQEPESVLRQLALFRSRFGLTQAEVKPVERAIAR RLLLDRSIAQRSWVDSTVKKLADPDITELRARLAIWEQDWRGLSGWVKMMPMARQKED RWRYWMARSLEVQGQQKPARDLYLETANLRGFYGFMAAQRTGVPYRIKNQSVKHVPDW RTASQRWPFLLRVRELLSMNEIAAARSEWIHNMDRNPVAKRIEFGHIALNQGWHELAI LASIRAEAWDALDLRFPLPLKRTFSQMAQERTMNTSLLYAISRQESALYPLAQSPVGA RGLMQLMPATAKETAGKLGVPYRNEQQLFDPTMNIRLGSAYLKRLLDVYDGNRILAAA AYNAGPGRVKRWREQSDNKPMDVWVESIPYKETRNYVQNVLSFDLIYQHKLQQPLRFM SERELNHAY" misc_feature complement(2964803..2966479) /locus_tag="B565_2641" /note="lytic murein transglycosylase; Provisional; Region: PRK11619" /db_xref="CDD:183236" misc_feature complement(2964881..2965246) /locus_tag="B565_2641" /note="Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain. Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic 'goose-type' lysozymes (GEWL). LTs catalyze...; Region: LT_GEWL; cd00254" /db_xref="CDD:29556" misc_feature complement(order(2964998..2965000,2965055..2965057, 2965157..2965159,2965217..2965219)) /locus_tag="B565_2641" /note="N-acetyl-D-glucosamine binding site [chemical binding]; other site" /db_xref="CDD:29556" misc_feature complement(2965217..2965219) /locus_tag="B565_2641" /note="catalytic residue [active]" /db_xref="CDD:29556" gene complement(2966801..2969305) /locus_tag="B565_2642" /db_xref="GeneID:10488559" CDS complement(2966801..2969305) /locus_tag="B565_2642" /codon_start=1 /transl_table=11 /product="GGDEF domain-containing protein" /protein_id="YP_004393294.1" /db_xref="GI:330830342" /db_xref="GeneID:10488559" /translation="MKQQATQVMWFFDRQHDQWSLSDQGAYQQWQGEGNHPWAARLLP EDEAGFADFLVRLHESHLPEQFIGHLKDDQGQLNHVLWSGQFVPTQQICCGWLAPLDT ANSAVSSLNLSLPLLQTTLLTQLAQALSARTGLDFFNTLVSQLAHILKVDAVWVGELC GADRVKVLAADGLSLKDYPLVGSPCQELYKQGAICFEVIDESQEYQPWLAAGQTYYGQ PLFDARGQLLGHLALLYSAPADTSNLTSVLNTFSVRMVAELERLQSDAQMRLSAVAFE THEGIIITDPGFKILRVNNAFSQITGFDSQSVLGLHLEEDLWPNLGGLGYELNTLSRW QGETQRRHVDGHTYPQWEIVTPVQDEKGVISHFVICFEDISERKAAERRIQDLAYYDE LTGLPNRRQLHETLVQTFNEATRDGLIGALLFIDLDHFKTINDSLGHATGDWLLKEVA ARLKRLVRQGDCLARLGGDEFVLLLPSLSASPPQAEMQADIIAERLITEIAAPYTYVG QVLHIGASVGITLFPDREQGVDDLLKQADTAMYQAKSAGRKTRRFFDASMQQQADRRL LIHNELRNALSQQELTLYYQPQHMVDGGDIIGVEALIRWQPAGRSLVSPAEFIPIAEE TDLIVDIGNWVLHEACAQYVLWEENGIHIPQISVNVSAKQFHATDFVERIHDVLAQTG MDPACLNLEITESVVLGHAEDTISKMTELKELGISFAIDDFGAGYSSLSYLKRLPADE LKIDRSFIQDIPKDGDNMAIVEAVIAMARHMGFNVTAEGVESRQQLEFLKAQGCSFYQ GYLASKPLPVPYLEKYVQRLTRPEQLREMQLSESEK" misc_feature complement(2968154..2968501) /locus_tag="B565_2642" /note="PAS domain S-box; Region: sensory_box; TIGR00229" /db_xref="CDD:161776" misc_feature complement(2968184..2968477) /locus_tag="B565_2642" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(order(2968271..2968273,2968286..2968288, 2968349..2968360,2968397..2968399,2968415..2968417, 2968427..2968429)) /locus_tag="B565_2642" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(2968244..2968246,2968250..2968252, 2968331..2968333,2968355..2968357,2968367..2968369)) /locus_tag="B565_2642" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(2967662..2968141) /locus_tag="B565_2642" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(2967899..2967901,2968028..2968030)) /locus_tag="B565_2642" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(2967896..2967907,2967911..2967913, 2967977..2967979,2967989..2967991,2968001..2968006, 2968013..2968015)) /locus_tag="B565_2642" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(2967821..2967823,2967923..2967925)) /locus_tag="B565_2642" /note="I-site; other site" /db_xref="CDD:143635" misc_feature complement(2966879..2967598) /locus_tag="B565_2642" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:30163" gene 2969674..2970012 /locus_tag="B565_2643" /db_xref="GeneID:10488560" CDS 2969674..2970012 /locus_tag="B565_2643" /codon_start=1 /transl_table=11 /product="ribosomal subunit interface protein" /protein_id="YP_004393295.1" /db_xref="GI:330830343" /db_xref="GeneID:10488560" /translation="MKIEITSKIIDITPAIRERIESRFEKLERLQVPLITPHVIVSKE RLMFTVEASAGIPNGKLFAQAEHEDLYAAINELGQKLERQLNRHTEKPIARRANAAFK EQPQPDEADA" misc_feature 2969677..2969946 /locus_tag="B565_2643" /note="RaiA ('ribosome-associated inhibitor A', also known as Protein Y (PY), YfiA, and SpotY, is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site...; Region: RaiA; cd00552" /db_xref="CDD:29642" misc_feature order(2969683..2969685,2969689..2969691,2969695..2969697, 2969749..2969751,2969758..2969760,2969776..2969781, 2969791..2969793,2969803..2969805,2969830..2969832, 2969839..2969850,2969857..2969859,2969863..2969865, 2969872..2969874,2969878..2969880,2969887..2969889, 2969929..2969934,2969944..2969946) /locus_tag="B565_2643" /note="30S subunit binding site; other site" /db_xref="CDD:29642" gene complement(2970124..2970633) /locus_tag="B565_2644" /db_xref="GeneID:10488561" CDS complement(2970124..2970633) /locus_tag="B565_2644" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393296.1" /db_xref="GI:330830344" /db_xref="GeneID:10488561" /translation="MLPSSIRNHLLVDEGQLGQRLNRDLQHGDRADFRLHLALLTDAV EEQPWFDAKPAATPQSRDWRLHFDLRPAEMLVAEGAGSDCSAINERLQQGGSMVDVRL WLALQTPPLTVKQPLLDEAVYDNLSPLARERLQGKLADVPRQEDPLVLLPILDRLQEG VDTRLHWLS" misc_feature complement(2970136..2970633) /locus_tag="B565_2644" /note="Ribosomal S4P (gammaproteobacterial); Region: Ribosomal_S4Pg; pfam11993" /db_xref="CDD:152428" gene 2970758..2970842 /locus_tag="B565_t064" /db_xref="GeneID:10488562" tRNA 2970758..2970842 /locus_tag="B565_t064" /product="tRNA-Tyr" /db_xref="GeneID:10488562" gene 2970877..2970961 /locus_tag="B565_t065" /db_xref="GeneID:10490049" tRNA 2970877..2970961 /locus_tag="B565_t065" /product="tRNA-Tyr" /db_xref="GeneID:10490049" gene complement(2971138..2974938) /locus_tag="B565_2645" /db_xref="GeneID:10490050" CDS complement(2971138..2974938) /locus_tag="B565_2645" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393297.1" /db_xref="GI:330830345" /db_xref="GeneID:10490050" /translation="MIWLKRIFLWLMGLVFLLLIGVSLLGFTHQGNKWLWQQAKGALP SLKGELVAGQLGYGWTLEGAGWQDELVDVTVDRAVLDWDLGKLLQGKLWIKSLAVTHP VVKVADSKPAPEEPSEPFVWRPLPLKIQVDSLKVADLDLAVPGVAVTLGSLDIGATLN RKGLIVRGPVLDNLTVTLDDATPSNTAKSAKQPAANEKQAVTAVARNDKASANTPKQG KGAPVAKTAKAAPILLPAIHLPFPIQLEGVSATRVQYKQGELIEGLDKLLLSATAADD RIEVRELSLRHAMADLVLKGHIQLSDDYPLAVTLDAKARKGLLDGELQGEQAMLALSG SVGKLGLALSAKGPIAANLKGSLAALDPDLPFDLALDWKSLGWPLHKPAKDEPSYRLD KGSLTAKGKLSGYQFALNTSGKGTDVPPFKLALDGKGDLERLSKIALQLNGLKGELKL DGKLAWNKGIEWQGTTLFKGINPAELLPELKGTLAGELESRFVMNEAGHWELKLPKLK VDGKLNQYPLALKGELSGNDKMEWQIPALSLQSGPNQLQAKGSISSAQWKLDANLQAP QLGGIYPGLKGDIKGQVKVSGNQQTPKIDADLASDRLYYAGTDLKGISLKGNVAIGAK PAGELALLVAQLKQGETKLSQLALNLSGDISQHLLTLTMKGDPVAANLKLGGGVRGDN WRGALSELRLKTPLRRWDLSSPWALDLDLPRQRLAMGDLCLGSQGASLCVKGSQVSAA QGTLEFALSEFDLKRLRPWLPDNFRWQAMLSADGRASWRGNQPTLHAVVRTTPGTFVA DGLKTDYQQLALALDFERQQAAIRLDFASKQIGNIDTDLLIREPAGRGLLGGQLKFDD LKLNTFAPLIPEVRSLQGIISADARFDGTLAAPLLFGQLNLRDGEVQTHSDMVTLTKL VTRLKIEGNRAELDGSMLVGKGPLALGGWLSWAKMPVSGSLTIQGKDLEAQYPGMGRV RVSPDIAVSLGEETRITGQVDIPWARILVKSLPDSAVAVSDDVTVVYDDLPPAPKQAS LPLAMKVAIRLGNDVKLDAMGLKTDVSGGLNIRQDPEKPLAGNGQLVLTNGRFKAYGQ NLIIKEGRILFSGPLDRPFLNIEANRDPDTIEGQVTVGVRVTGPASKPEITVYSEPQM AQSEQLSYLLRGKGLQTGGEDGGFNGLLVAGAVSQANGVVSSIGESLGMSDVSLDTAG SGDNTQVTLSAYLLPGLQFQYGVGVFSPIAEFKLRYEVLPRLYLQAMSGVAQAVDIFY RFTL" misc_feature complement(2971147..2974857) /locus_tag="B565_2645" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG2911" /db_xref="CDD:32735" misc_feature complement(2971147..2972139) /locus_tag="B565_2645" /note="Family of unknown function (DUF490); Region: DUF490; pfam04357" /db_xref="CDD:190952" gene complement(2975000..2976775) /locus_tag="B565_2646" /db_xref="GeneID:10488563" CDS complement(2975000..2976775) /locus_tag="B565_2646" /codon_start=1 /transl_table=11 /product="outer membrane protein, OMP85 family" /protein_id="YP_004393298.1" /db_xref="GI:330830346" /db_xref="GeneID:10488563" /translation="MTGCISSLLAGRSLSGSAFRRGLRVLGVGMLLSLLASPAFAAKL TYQVKGLKGENKDNVEAYLNALPVYQERQYRPARAKITESVQKALQVYGYYQPKITLS RDKKTPSKVVIEVDKGEPVIVSRLDILLEGDAGSDELYSALLDKLPLKEGEPLNHAKY ESIKADLGSLGLARGYFDAKLSKSQVKVFPDKGTAEIFILFESGHRYRFGEIRYDATP EALHLIRPLINIKSGDPYLAIRLAEMSQDVSSTKLFRQVDIKPVLSEASNYRVPIAVT LDNRVDHEIETGIGYATDVGPRMSATWEKPWVNRYGHRLFATAKVSAPEAELSFDYQI PVGNPLRDYYSIQTGYQYKDNNDTRSDLTTIGVHRWTRRPESWDRDVFIRLENEIYTQ GADEGNSLLLIPGVSWSRLRVRGTLVPDWGDRQQLTLEFSDPRWGSDISFMRVWGRSK WLRTLGDNHRFLMRAEQGAIIGDSFSLVPPSLRFFTGGDQTVRGFGYESISPTGPDGK LTGGRYTSVASLEYNYRFSEKWLGAMFVDGGTSTTDYSEPWKIGTGVGVRWVTPIGQV RLDLAVGVSEEDKPLRLHFALGPEL" misc_feature complement(2975003..2976643) /locus_tag="B565_2646" /note="Outer membrane protein [Cell envelope biogenesis, outer membrane]; Region: COG0729" /db_xref="CDD:31073" misc_feature complement(2976173..>2976355) /locus_tag="B565_2646" /note="Surface antigen variable number repeat; Region: Surf_Ag_VNR; cl10520" /db_xref="CDD:195983" misc_feature complement(2975003..2975857) /locus_tag="B565_2646" /note="Surface antigen; Region: Bac_surface_Ag; cl03097" /db_xref="CDD:155280" gene 2977290..2977664 /locus_tag="B565_2647" /db_xref="GeneID:10488564" CDS 2977290..2977664 /locus_tag="B565_2647" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393299.1" /db_xref="GI:330830347" /db_xref="GeneID:10488564" /translation="MHARSEQMADYIADRLEFITFLACCSALLALLTGMSGQQALAFT ALNLPFGLGILLAMAMLAPLPVHWRLPGITLLLAGCALMTLQLGGEWLNPLAIWSLYA LLGLEIIWQARPRAVLATRARQ" gene 2977796..2978074 /locus_tag="B565_2648" /db_xref="GeneID:10488565" CDS 2977796..2978074 /locus_tag="B565_2648" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase C" /protein_id="YP_004393300.1" /db_xref="GI:330830348" /db_xref="GeneID:10488565" /translation="MKKACAQHILVKTEKQCLEIKEKIEKGADFGQMAKRFSTCASAK RSGDLGEFNKGDMVKPFDDAVFKGELLKVLGPVRTKFGFHLIKVLYRN" misc_feature 2977799..2978071 /locus_tag="B565_2648" /note="PPIC-type PPIASE domain; Region: Rotamase; cl08278" /db_xref="CDD:195679" gene 2978254..2978928 /locus_tag="B565_2649" /db_xref="GeneID:10488566" CDS 2978254..2978928 /locus_tag="B565_2649" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393301.1" /db_xref="GI:330830349" /db_xref="GeneID:10488566" /translation="MPRSCLWPLLAWLLPLAGALGSRLHLWPWWIGFAICLIGALVSL ILLVRLPWSRNRYASGLGALPLLLPLTFVAQTLRMPLINDVSTDPYNPPLLRWAAELR TAQDLPINSAPLKAVEAKPGPLFTRASPAEVVIEASELMQELGWQVRPSPDGLDAVVT TGWFGFQDDVALRVFVGPSETRIDMRSASRQGQSDLGTNRARIEEFLIRLNERLGQAY KPNLKH" misc_feature 2978500..2978886 /locus_tag="B565_2649" /note="Protein of unknown function (DUF1499); Region: DUF1499; cl01841" /db_xref="CDD:194198" gene 2978940..2979521 /locus_tag="B565_2650" /db_xref="GeneID:10488567" CDS 2978940..2979521 /locus_tag="B565_2650" /codon_start=1 /transl_table=11 /product="4-carboxymuconolactone decarboxylase domain-containing protein" /protein_id="YP_004393302.1" /db_xref="GI:330830350" /db_xref="GeneID:10488567" /translation="MRVEVKPDREYAWFIRPFFWLQKRNYGQVLIPGKCWGRSPRLFA AVATLYGVINRKRSPIDPVLRSLVTVRVSQLNWCRFCVDINAMTLIKRAGSSEKVEAL ANWRESTLFDEREKAVLDYTEAMTGLDGVSDKQAARLKPWFDDDAMVELTGLIAFQNM SAKFNAALDIAPQGFCQLPVQPERPAQPDSKDA" misc_feature 2979057..2979311 /locus_tag="B565_2650" /note="Carboxymuconolactone decarboxylase family; Region: CMD; cl00460" /db_xref="CDD:193827" gene 2979521..2981674 /locus_tag="B565_2651" /db_xref="GeneID:10488568" CDS 2979521..2981674 /locus_tag="B565_2651" /codon_start=1 /transl_table=11 /product="mercuric reductase" /protein_id="YP_004393303.1" /db_xref="GI:330830351" /db_xref="GeneID:10488568" /translation="MNRTRLLLALVMGGLIGTFFALDLGRYLSLGALQAQQAAVAHWV DSHFVSASLLFVLIYVLSTALSLPGASLLTLGGSAVFGVAWGLLLVSFASTIGATLAF LSARFLLRDWVTARFGDKLATFQSGMAKEGAFYLLSLRLIPVFPFFLVNLLMGLTPIS VSTYYWVSQLGMLPGTFVYVLAGSELGQLTSTGNILSPGLMVALTLLGLMPLLVKKLT AHLAQRRLLAPYRKPARYDYNLLVIGAGAGGLVTSYIAAAVKAKVALIEKHKMGGDCL NSGCVPSKALIRSARFAAEQRKADELGFSPSHSRADFSAVMERVAAVIKEVEPHDSIE RYQGLGVECIEGEARLVSPWEVEVNGQRLASRHIVIATGARPLVPNLPGLDQVPYLTS DSLWQLRTPPRRLLVLGGGPIGCELAQSFALLGIPVTLVELSEQLLPREDREVADALA GQMSRDGVRLLTGWRAERADYLPAAEGELPIRLQLRRGEETQQVEGDQLLLALGRVAN VSGFGLEALGVELAPRGTIAVDGFLATNFPSILAVGDVAGPYQFTHFAAHQAWYAAVN ALFGQFKRFQADYRVIPAATYTTPEIARVGLNRKEAEAQKIPFEATRFELAELDRAIA DGERHGFVEVLTVPGKDTILGATIVGTHAGERIAEFVLAMRHRLGLGKILGTIHAYPT LMEGNKYVAGEWKRAHQPTRVLALLARYHRWRRGA" misc_feature 2979521..2980093 /locus_tag="B565_2651" /note="SNARE associated Golgi protein; Region: SNARE_assoc; cl00429" /db_xref="CDD:193815" misc_feature 2980232..2981608 /locus_tag="B565_2651" /note="mercuric reductase; Validated; Region: PRK06370" /db_xref="CDD:180546" misc_feature 2980730..>2980909 /locus_tag="B565_2651" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 2981264..2981578 /locus_tag="B565_2651" /note="Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Region: Pyr_redox_dim; pfam02852" /db_xref="CDD:190451" gene 2981692..2982888 /locus_tag="B565_2652" /db_xref="GeneID:10488569" CDS 2981692..2982888 /locus_tag="B565_2652" /codon_start=1 /transl_table=11 /product="ABC transporter substrate-binding protein" /protein_id="YP_004393304.1" /db_xref="GI:330830352" /db_xref="GeneID:10488569" /translation="MLKPFSQLNSQLKQRLNAMLFVLPLLASGPLLATPDDNWQQTLE EAKGQTVYFNAWGGSPEINAYLVWAGQELARDYQVKLVQVKVDDIAQSVSQLLANKQA GKQAGGPIDLLWVNGKNFKALKEQGLLGAPFTAELPNMALVDNSLPVSEDFTLPVEGL EAPWGIGQLNLMVDTEEVARAPTSAAALLAWAKAHPGRFTYPKPPQFHGSSFLKQILL ELTPNPAPLYGEATESDFANVTAPLWAWLDELHPALWRKGKLFPTSAAETRQLLDDGE LAMAISFNPQEAQSAAQIGALPPSVEAVAMEKGALTNSHFLAIPFNASARAGAKVVAN FLLSPAAQARKANPAFWGDPSVLRADTLPDSAKGQPALRFKAVAEPHPSWQLKLEAAW AERYGH" misc_feature 2981737..2982885 /locus_tag="B565_2652" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature 2981743..2982882 /locus_tag="B565_2652" /note="ABC-type uncharacterized transport system, periplasmic component [General function prediction only]; Region: COG4134" /db_xref="CDD:33890" gene 2982966..2984600 /locus_tag="B565_2653" /db_xref="GeneID:10488570" CDS 2982966..2984600 /locus_tag="B565_2653" /codon_start=1 /transl_table=11 /product="inner membrane ABC transporter permease YnjC" /protein_id="YP_004393305.1" /db_xref="GI:330830353" /db_xref="GeneID:10488570" /translation="MAVIYLAIFVIPLLAGLWQLLAEGMIASHLALLLAQPGLWHSAA LSLWIGAASTLGSLLMTALLLAHSDSRAFGLLRRLLSPMLAMPHVAFAIGFAFLLAPS GWLLRLLSPALTGFDLPPDWQTIRDPWGLGLIALLVFKETPFLLLMAMAAQQPIQLAR QQWLGASLGFSAPQTWWRLLLPALWPALRLPIYAVAAYGVAVVDLAQLLGPDAPAPLA VRLWLWYQDPDLLWRGATASGALLLLAITALLIAMLRLLEWLHKEMGKGYWLNGKRAA PHFFANRLAAGFAFTLITLNLAVLAALLLWSLARRWPFPALWPSQWSSHYWLDLLPTL LPLLATSALLALVSGLLALMMAVCSLEAQAGRRPWPLWLICLPLLLPQASLLFGIRLG LDWLAHDSISSGIGWGWVLWSQLLFVFPYVYLCLHGPYRQFDPRITQSALLLGATPWR AWWQVKAPLLARPLLFAFGVGAAVSLAQYLPTLLFGAGRVVTITTEAVAIGSGLNRRL AGLYGLLQLLLPLVIYLLALWLPARINPALKGGGSR" misc_feature 2983182..2984486 /locus_tag="B565_2653" /note="ABC-type uncharacterized transport system, permease component [General function prediction only]; Region: COG4135" /db_xref="CDD:33891" gene 2984624..2985274 /locus_tag="B565_2654" /db_xref="GeneID:10488571" CDS 2984624..2985274 /locus_tag="B565_2654" /codon_start=1 /transl_table=11 /product="ABC transporter ATPase" /protein_id="YP_004393306.1" /db_xref="GI:330830354" /db_xref="GeneID:10488571" /translation="MLSSTPLRLYLDENLLLSLPALQVAPGEVLTLMGPSGCGKSSLL AGLAGVLPGAQTDSDPIRLEGEVRLGERPLNTLPAQARRIGMLFQDDLLFDHLTVAEN LMFGMPATIKGKRARREKALAALAQVTLADQADKLPQLLSGGQRARVSLLRALLAEPD ALLLDEPFSRLDKPLRAAFRELVFAQIKALAIPAILVTHDEEDAPGTILNLTESCF" misc_feature 2984624..2985238 /locus_tag="B565_2654" /note="ABC-type uncharacterized transport system, ATPase component [General function prediction only]; Region: COG4136" /db_xref="CDD:33892" misc_feature 2984687..2985235 /locus_tag="B565_2654" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 2984723..2984746 /locus_tag="B565_2654" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(2984732..2984737,2984741..2984749,2984888..2984890, 2985116..2985121,2985218..2985220) /locus_tag="B565_2654" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 2984879..2984890 /locus_tag="B565_2654" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 2985044..2985073 /locus_tag="B565_2654" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 2985104..2985121 /locus_tag="B565_2654" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 2985128..2985139 /locus_tag="B565_2654" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 2985206..2985226 /locus_tag="B565_2654" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene 2985289..2985930 /locus_tag="B565_2655" /db_xref="GeneID:10488572" CDS 2985289..2985930 /locus_tag="B565_2655" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphate synthase" /protein_id="YP_004393307.1" /db_xref="GI:330830355" /db_xref="GeneID:10488572" /translation="MFDRHLIPVIRSPLTQLAKPLCRAGISANQVSLTGFAIGMLALP LLAFGSYQWALATILLNRLLDGLDGAVARETGITDCGGFLDITLDFIFYAAVVLGFAL AAPANALPAATLLFAFMGTGSSFLAFAIMAGKRGIDNPVYHHKSLYYLGGLTEGSETI ALFVLMCLWPTAFAPLAYGFALLCAITTLTRLWSGYHTLRPPQRETAQPSQKG" misc_feature 2985328..2985888 /locus_tag="B565_2655" /note="CDP-alcohol phosphatidyltransferase; Region: CDP-OH_P_transf; cl00453" /db_xref="CDD:193825" gene 2986036..2987127 /locus_tag="B565_2656" /db_xref="GeneID:10488573" CDS 2986036..2987127 /locus_tag="B565_2656" /codon_start=1 /transl_table=11 /product="Lytic murein transglycosylase B" /protein_id="YP_004393308.1" /db_xref="GI:330830356" /db_xref="GeneID:10488573" /translation="MRRLASLLTLSLFPLLGGCSSAPAPKPVVVPQPKSAFINQAPSS KPVYTQGVSKGDFANRPNVDRFVQKMVEKHGFDNAQLHQVLAQAERYDWIIRLMDAQA PTTAKPTGPTGAWNRYRAKFITPDNVQNGVNFWREYASELNRAEQIYGVPPEIIVGII GVETRWGRVMGKTRILDALATLAFDYPRRAEFFTSELEAFLVMTRDEGMDPTEPKGSY AGAMGYGQFMPSSFQRYAVDFDGNGHTNLWDPVDAIGSVANYFKAHGWEKGQPVAVRG QGQLPGYEHGFQTRYRVATLRRAGLTPTSSLGNHSESSLLRLDVGTGYQYWYGLPNFY TITRYNHSTHYAMAVWQLGLAVKEAKGGY" misc_feature 2986387..2987082 /locus_tag="B565_2656" /note="lytic murein transglycosylase; Region: MltB_2; TIGR02283" /db_xref="CDD:162796" misc_feature 2986678..>2986842 /locus_tag="B565_2656" /note="Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain. Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic 'goose-type' lysozymes (GEWL). LTs catalyze...; Region: LT_GEWL; cd00254" /db_xref="CDD:29556" misc_feature order(2986717..2986719,2986813..2986815) /locus_tag="B565_2656" /note="N-acetyl-D-glucosamine binding site [chemical binding]; other site" /db_xref="CDD:29556" gene complement(2987176..2987658) /locus_tag="B565_2657" /db_xref="GeneID:10488574" CDS complement(2987176..2987658) /locus_tag="B565_2657" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_004393309.1" /db_xref="GI:330830357" /db_xref="GeneID:10488574" /translation="MESDHVDLLLAQWARQRPDLDCSPMGVLGRVARMAAIAGREVSE ELKECGLLGTDFDILATLRRSGEPLTPTVLYQSAMLSSGAMTARLDKLAERGLIERQA APSDRRSLLVCLTESGKALIDRAVELHVANERRLLAPLTEAEQAQLAALLKRWLLENE " misc_feature complement(2987254..2987529) /locus_tag="B565_2657" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene 2987754..2988635 /locus_tag="B565_2658" /db_xref="GeneID:10488575" CDS 2987754..2988635 /locus_tag="B565_2658" /codon_start=1 /transl_table=11 /product="drug/metabolite exporter (DME) family transporter" /protein_id="YP_004393310.1" /db_xref="GI:330830358" /db_xref="GeneID:10488575" /translation="MPMLIALLAPLLWGSTYAVVSLYLTDYSPYWVAVWRALPAGLLL LLLHPRMPPLPWGKQFLLAFCNIAAFFALLFVAAFRLPGAVAGTLGATLPLVLMLLAW LQDGTRPSLKWLLLGLMGLAGVLLLLNPSANLDPVGVACAMLATVLIGQSSRWMRHWP VNDLLALTAWQLLLGGLMLIPLAWWLAGPMPLPDPASVPGLLWLILLNTALGYWAWLW GLKHHGPEVMGMLALTNPMMAVSLGVLMVGETLDVSQWIGIGVILLSLFLMKLPARSF FKRWQARRASTGICNEV" misc_feature 2987790..2988551 /locus_tag="B565_2658" /note="Carboxylate/Amino Acid/Amine Transporter; Region: 2A78; TIGR00950" /db_xref="CDD:162128" misc_feature <2988303..2988560 /locus_tag="B565_2658" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene complement(2988722..2990371) /locus_tag="B565_2659" /db_xref="GeneID:10488576" CDS complement(2988722..2990371) /locus_tag="B565_2659" /codon_start=1 /transl_table=11 /product="phosphoglucomutase, alpha-D-glucose phosphate-specific" /protein_id="YP_004393311.1" /db_xref="GI:330830359" /db_xref="GeneID:10488576" /translation="MAQHSHAGQPARLSDLTNIPRLVSAYYLNKPDMSRPEQRVAFGT SGHRGSALHSAFTESHILAVTQALVEYRQQAGITGPLFVGMDTHALSESAFASAVEVL AANGVETRIQAGMGFTPTPVISHAILRHNAGKPAARADGVVITPSHNPPEDGGFKYNP PHGGPAEGEITKWVEDRANAILEAGLAGVKRMPFAEALKSPFVVEHDYVTPYVDDLKN VLDMDAIKNAGIKIGVDPLGGSGVAYWDVIAKTYGLNIEVVNYKVDPTFSFMTLDKDG KIRMDCSSPFAMASLIALKDKFDIALGNDPDYDRHGIVTKSGLMNPNHYLAVAIQYLF THRTGWSADAAVGKTLVSSSMIDRVAGEIGRTLKEVPVGFKWFVDGLYSGEFGFGGEE SAGASFLRKDGTVWTTDKDGFILALLAAEILAVTGKDPQAHYDVLEAKFGRSSYRRID APANSAQKAVLSKLDPALVEASTLAGEPIIAKLTKAPGNDAAIGGLKVVTENGWFAAR PSGTESIYKIYMESFKGDAHLDLIQQEAQQIVSAALAKAGV" misc_feature complement(2988737..2990362) /locus_tag="B565_2659" /note="phosphoglucomutase; Validated; Region: PRK07564" /db_xref="CDD:181032" misc_feature complement(2988752..2990314) /locus_tag="B565_2659" /note="This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl...; Region: PGM_like3; cd05801" /db_xref="CDD:100094" misc_feature complement(order(2988821..2988823,2988836..2988844, 2988848..2988850,2989187..2989189,2989193..2989195, 2989199..2989201,2989250..2989258,2989319..2989321, 2989442..2989447,2989451..2989453,2989457..2989459, 2989901..2989903,2989925..2989933,2990228..2990230, 2990237..2990239,2990243..2990245)) /locus_tag="B565_2659" /note="active site" /db_xref="CDD:100094" misc_feature complement(order(2988821..2988823,2988836..2988844, 2988848..2988850,2989187..2989189,2989193..2989195, 2989199..2989201,2989250..2989252,2989256..2989258, 2989319..2989321,2989442..2989444,2989931..2989933, 2990237..2990239)) /locus_tag="B565_2659" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100094" misc_feature complement(order(2989445..2989447,2989451..2989453, 2989457..2989459,2989931..2989933)) /locus_tag="B565_2659" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:100094" gene complement(2990430..2990939) /locus_tag="B565_2660" /db_xref="GeneID:10488577" CDS complement(2990430..2990939) /locus_tag="B565_2660" /codon_start=1 /transl_table=11 /product="SeqA protein" /protein_id="YP_004393312.1" /db_xref="GI:330830360" /db_xref="GeneID:10488577" /translation="MKTIELDDDLYFYIASQTRHIGESASDILRRLLEQPAHQRVPVA EPVAVAQPSTVATQQGLQALLDSGELQKEEKSINRFMLVLSTLYRDNPEGFTQATEIK GRKRVYFSQDPEALRASGSTTKPKPVPETPFWVITNTNTSRKQNMVAQLMASMGYGEE VIAQVCGAI" misc_feature complement(2990433..2990939) /locus_tag="B565_2660" /note="SeqA protein; Region: SeqA; cl11470" /db_xref="CDD:187056" gene 2991214..2991996 /locus_tag="B565_2661" /db_xref="GeneID:10488578" CDS 2991214..2991996 /locus_tag="B565_2661" /codon_start=1 /transl_table=11 /product="esterase YbfF" /protein_id="YP_004393313.1" /db_xref="GI:330830361" /db_xref="GeneID:10488578" /translation="MQQNSILNFKEQGQGPAVILIHGLFGSLDNLGLLARALCEQYRV ISVDLRNHGASFHSSEMSYPAQAGDILTLMDRLNIAEATLIGHSMGGKVGMQVAKLAP ARVTKLVVADMAPVAYPHSRHQNVFAGLNATLRTPPQSRSEAEAMLAQHIELAGVRQF LLKSFARGEHGWGWRFNVPALEQNYANIMGWPEDEHRFEGPVLFIKGGNSDYMQLQYS ETALAQFPAAKVRVIAGTGHWLHAEKPALFNKLVVDFLSTGG" misc_feature 2991232..2991948 /locus_tag="B565_2661" /note="acyl-CoA esterase; Provisional; Region: PRK10673" /db_xref="CDD:182637" misc_feature 2991247..>2991615 /locus_tag="B565_2661" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" gene 2992052..2992273 /locus_tag="B565_2662" /db_xref="GeneID:10488579" CDS 2992052..2992273 /locus_tag="B565_2662" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393314.1" /db_xref="GI:330830362" /db_xref="GeneID:10488579" /translation="MLSEHIDLIESLGLKLFFVAIFILIGLAIQDVLKRGNVPRFGRF IVWLVLFLGCAGFVAKGLIELGWEGSGLG" misc_feature 2992097..2992252 /locus_tag="B565_2662" /note="Protein of unknown function (DUF2788); Region: DUF2788; pfam10981" /db_xref="CDD:151428" gene 2992294..2992590 /locus_tag="B565_2663" /db_xref="GeneID:10488580" CDS 2992294..2992590 /locus_tag="B565_2663" /codon_start=1 /transl_table=11 /product="helix-turn-helix protein" /protein_id="YP_004393315.1" /db_xref="GI:330830363" /db_xref="GeneID:10488580" /translation="MAKQQTDRTTLDLFANEKRPGRPKTNPLPRETQLKINKRNQLKR DRENGLKRVELKVEAELLERLNQLALQQNISRAELIQSILKQQIESAFAVDIAV" misc_feature 2992294..2992563 /locus_tag="B565_2663" /note="LexA regulated protein; Provisional; Region: PRK11675" /db_xref="CDD:183272" gene 2992630..2993154 /locus_tag="B565_2664" /db_xref="GeneID:10488581" CDS 2992630..2993154 /locus_tag="B565_2664" /codon_start=1 /transl_table=11 /product="Flavodoxin" /protein_id="YP_004393316.1" /db_xref="GI:330830364" /db_xref="GeneID:10488581" /translation="MASVGLFFGSDTGNTEAVAKMIQKELGKNLIEVRDIAKSSKADI ESFDLLMFGIPTWYYGEAQADWDDFFPDLGEIDFTNKLVAIFGCGDQEDYSEYFLDAM GTLRDIVEAKGAIIIGHWPTAGYEFEASKALVDDKHFVGLGIDEDRQPELTAERVKGW CKQLHEEMCLGELE" misc_feature 2992630..2993139 /locus_tag="B565_2664" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:193819" gene complement(2993244..2993717) /locus_tag="B565_2665" /db_xref="GeneID:10488582" CDS complement(2993244..2993717) /locus_tag="B565_2665" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393317.1" /db_xref="GI:330830365" /db_xref="GeneID:10488582" /translation="MDWLFDNAAWVRRALNAWPPFWGAGIKIETLSDDFRYCRVTLKS RWWNKNANRTQFGGSMFAMTDPIYPLMLMGYFKNRYYVWDKAGSINYIKPGKGKLVAE FNLTEGKLAEIVAATEGGNKHFPEFEVTVQDKSGELVAQVKRTLYVRAKPEHRGE" misc_feature complement(2993274..2993645) /locus_tag="B565_2665" /note="PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not...; Region: PaaI_thioesterase; cd03443" /db_xref="CDD:48038" misc_feature complement(order(2993436..2993447,2993466..2993468, 2993553..2993555)) /locus_tag="B565_2665" /note="CoenzymeA binding site [chemical binding]; other site" /db_xref="CDD:48038" misc_feature complement(order(2993445..2993447,2993451..2993465, 2993535..2993537,2993544..2993546,2993550..2993552)) /locus_tag="B565_2665" /note="subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:48038" misc_feature complement(order(2993466..2993468,2993508..2993513, 2993520..2993525,2993547..2993549)) /locus_tag="B565_2665" /note="PHB binding site; other site" /db_xref="CDD:48038" gene 2993959..2994387 /locus_tag="B565_2666" /db_xref="GeneID:10488583" CDS 2993959..2994387 /locus_tag="B565_2666" /codon_start=1 /transl_table=11 /product="transcriptional repressor of iron transport" /protein_id="YP_004393318.1" /db_xref="GI:330830366" /db_xref="GeneID:10488583" /translation="MADNNQALKKAGLKITLPRVKILEILQQPDCQHTSAEDLYKRLI DLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELATQEHHDHLVCLDCGKVIEF SDEVIEQRQREIAKKFNIRLTNHSLYLYGHCATGECKHDE" misc_feature 2994010..2994357 /locus_tag="B565_2666" /note="Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators; Region: Fur_like; cd07153" /db_xref="CDD:133478" misc_feature order(2994055..2994057,2994199..2994201,2994220..2994222, 2994226..2994228,2994259..2994261) /locus_tag="B565_2666" /note="metal binding site 2 [ion binding]; metal-binding site" /db_xref="CDD:133478" misc_feature 2994109..2994153 /locus_tag="B565_2666" /note="putative DNA binding helix; other site" /db_xref="CDD:133478" misc_feature order(2994217..2994219,2994223..2994225,2994280..2994282, 2994331..2994333) /locus_tag="B565_2666" /note="metal binding site 1 [ion binding]; metal-binding site" /db_xref="CDD:133478" misc_feature order(2994232..2994240,2994286..2994291,2994316..2994324, 2994328..2994354) /locus_tag="B565_2666" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133478" misc_feature order(2994235..2994237,2994244..2994246,2994355..2994357) /locus_tag="B565_2666" /note="structural Zn2+ binding site [ion binding]; other site" /db_xref="CDD:133478" gene complement(2994504..2996165) /locus_tag="B565_2667" /db_xref="GeneID:10488584" CDS complement(2994504..2996165) /locus_tag="B565_2667" /codon_start=1 /transl_table=11 /product="glutaminyl-tRNA synthetase" /protein_id="YP_004393319.1" /db_xref="GI:330830367" /db_xref="GeneID:10488584" /translation="MSQANSPTNFIRQIIDEDLASGKHSSVHTRFPPEPNGYLHIGHA KSICLNFGIARDYQGQCNLRFDDTNPVKEDIEYVESIKQDVQWLGFQWNGEICYSSDY FDKLHGYAIELIEKGLAYVDELTPEQMREYRGTLTEAGKNSPFRDRSVEENLALFAKM KNGEFAEGTACLRAKIDMASPFMVMRDPVIYRIKFAHHHQTGDKWCIYPMYDFTHCIS DALEGITHSICTLEFQDNRRLYDWVLDNITIDCHPRQYEFSRLNLEYTVMSKRKLNLL VTEKHVDGWDDPRMLTVSGLRRRGYTPASIREFCKRIGVTKQDNIVEMSMLEACIRED LNENAPRAMAVLHPVKVVIENLAADEVLTAPAHPSNAEMGTRELNFTREIFIDEADFK EEANKQFKRLVLGKEVRLRNAYVIKAERIEKDADGKVTCIYCSYDPETLGKDPADGRK VKGVIHWVSATHSLPAEVRLYDRLFKVPNPGAEDDFEAALNPESLVIIEGARVEASLK NAKPEQAYQFEREGYFCADNKLSSPEHLVFNRTVALRDSWGKVEG" misc_feature complement(2994513..2996165) /locus_tag="B565_2667" /note="glutaminyl-tRNA synthetase; Provisional; Region: PRK05347" /db_xref="CDD:180031" misc_feature complement(<2995803..2996087) /locus_tag="B565_2667" /note="nucleotidyl transferase superfamily; Region: nt_trans; cl00015" /db_xref="CDD:193613" misc_feature complement(2996037..2996048) /locus_tag="B565_2667" /note="active site" /db_xref="CDD:173912" misc_feature complement(2996037..2996048) /locus_tag="B565_2667" /note="HIGH motif; other site" /db_xref="CDD:173912" misc_feature complement(order(2996037..2996039,2996046..2996048)) /locus_tag="B565_2667" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:173912" misc_feature complement(2995143..>2995574) /locus_tag="B565_2667" /note="catalytic core domain of glutaminyl-tRNA synthetase; Region: GlnRS_core; cd00807" /db_xref="CDD:185676" misc_feature complement(2995353..2995367) /locus_tag="B565_2667" /note="KMSKS motif; other site" /db_xref="CDD:185676" misc_feature complement(2994585..2995151) /locus_tag="B565_2667" /note="tRNA synthetases class I (E and Q), anti-codon binding domain; Region: tRNA-synt_1c_C; pfam03950" /db_xref="CDD:190806" gene complement(2996521..2999184) /locus_tag="B565_2668" /db_xref="GeneID:10488585" CDS complement(2996521..2999184) /locus_tag="B565_2668" /codon_start=1 /transl_table=11 /product="beta-N-acetylglucosaminidase" /protein_id="YP_004393320.1" /db_xref="GI:330830368" /db_xref="GeneID:10488585" /translation="MNLKHSLLAIAMSTVFVSQVQAADAAKQAVVDSLANNLVVKYEV VTNDGAGAGLDCQALGSEWASCGVAKLHLTNTGADVTSKDWSIYVSSIRRIQRVDNDQ FTITHLTGDLYRLTPSEKFQGFAKDATVEVPLVVEYWVLFESDIMPNWYVASEGAEPK VLASMSNINDASTYEKPMPADGWKRTKDDKNILMNSETRFAANQTSTLLPAGKIDNQI LPTPMKQVVKAGPQVDFSTIKLNALDLASDRAEALKAQLTKLGVTLSDTGYPVTIKLG SKLKQAEGYDMTIGQKGTVIQGRDIDGAFWGAQSLISLLGVDDKLVSPMTVEDAPRFE YRGMQTDVARHFRSLDTMKKLVDQMSAMKLNVLHLGLTNDEGWRLEIPGLPELTQVGS QRCHDESETKCLMPQLGSGPTSDNQGSGFYSKSDYVDLVRYAKARGVTVIPEINMPAH ARAAVVSMEARYKRLMAEGKEAEANQFRLTDPADTSNVTSVQFYDKMSFINPCQPGAA TFVAKVMDEVAQMHQAAGQPLTAWHYGGDEAKNIMQGGGYQDPAVTKKEELVAWKGNV DSSKQDKPFGKSPMCQKMIDEGKIKEVGELPVYFAKEVGQMVKDRGFSTLQAWEDGLK YASGAKDFATDNTRVNFWETLYWGGFNEAMKWAHKGYEVVLSNPDYLYFDFPNEVHPA ERGYYWATRFNDTRKVFAFAPENLPQNAETSVDRDGNAFVAKGDQDPVKFKGISGQQW SETVRTDAQYEYMVYPRIFSVAERAWHKGGFELNYVKGREFSGETKFVNKATLNKEWN QFANVLGQRVLPKLDQAGVEYRLSVPGAKVVNGVLEANVDLPGLPIQYSLDGTNWSAY DAAAKPSVNGKVYLRTTSFDGKRTSRVTELN" misc_feature complement(2998591..2999076) /locus_tag="B565_2668" /note="Putative carbohydrate binding domain; Region: CHB_HEX; pfam03173" /db_xref="CDD:112008" misc_feature complement(2996533..2999016) /locus_tag="B565_2668" /note="N-acetyl-beta-hexosaminidase [Carbohydrate transport and metabolism]; Region: Chb; COG3525" /db_xref="CDD:33328" misc_feature complement(2996773..2998200) /locus_tag="B565_2668" /note="The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i)...; Region: GH20_Sm-chitobiase-like; cd06569" /db_xref="CDD:119337" misc_feature complement(order(2996959..2996961,2996965..2996967, 2997121..2997123,2997127..2997129,2997160..2997165, 2997169..2997171,2997259..2997261,2997328..2997330, 2997571..2997576,2997709..2997714,2997835..2997837, 2998153..2998155)) /locus_tag="B565_2668" /note="active site" /db_xref="CDD:119337" misc_feature complement(2996527..2996757) /locus_tag="B565_2668" /note="E or 'early' set of sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end; Region: E_set; cl09101" /db_xref="CDD:195789" gene complement(2999306..3000784) /locus_tag="B565_2669" /db_xref="GeneID:10488586" CDS complement(2999306..3000784) /locus_tag="B565_2669" /codon_start=1 /transl_table=11 /product="phosphotransferase system N-acetylglucosamine-specific IIBC component" /protein_id="YP_004393321.1" /db_xref="GI:330830369" /db_xref="GeneID:10488586" /translation="MNILGYLQKIGRALMVPVAVLPAAAILMGVGYWIDPNGWGGDSA LAAFLIKAGAAIIDNMSVLFAVGVAYGMSKDKDGSAALAGLVGFLVVTTLLSPGAVAQ IKSIPVEQVPAAFAKISNQFVGILCGVIAAELYNRFSSVELHKALSFFSGRRLVPIVT SVVMIVVSFILMAVWPAIYGGLVSFGESIVSLGSTGAGIYAFFNRLLIPIGLHHALNS VFWFNVAGINDIPNFLGGQATIDAALAAGKSLEQVKGVVGMYQAGFFPIMMFGLPGAA LAIYHSAKKENKEKVASIMIAAAFASFFTGVTEPLEFSFMFVAPVLYVIHAVLTGISV FIAASMQWMAGFGFSAGLVDMVLSSRNPLATNWYMLIPQGLVFFGLYYTVFRVVIAKL NLKTPGREDDEESAPAAAQSTNRTELAKQYLEVLGGQENLVSIDACITRLRLTLKDRS IVDERKLKALGAAGVVKLGEQNLQVILGPLAEIIAGEMKALR" misc_feature complement(2999318..3000778) /locus_tag="B565_2669" /note="PTS system, N-acetylglucosamine-specific IIBC component; Region: PTS-II-BC-nag; TIGR01998" /db_xref="CDD:162650" misc_feature complement(2999555..3000613) /locus_tag="B565_2669" /note="Phosphotransferase system, EIIC; Region: PTS_EIIC; cl00557" /db_xref="CDD:186079" misc_feature complement(2999312..2999539) /locus_tag="B565_2669" /note="PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIB_glc; cd00212" /db_xref="CDD:29267" misc_feature complement(2999456..2999476) /locus_tag="B565_2669" /note="active site turn [active]" /db_xref="CDD:29267" misc_feature complement(2999471..2999473) /locus_tag="B565_2669" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29267" gene 3001058..3001858 /locus_tag="B565_2670" /db_xref="GeneID:10488587" CDS 3001058..3001858 /locus_tag="B565_2670" /codon_start=1 /transl_table=11 /product="glucosamine-6-phosphate deaminase" /protein_id="YP_004393322.1" /db_xref="GI:330830370" /db_xref="GeneID:10488587" /translation="MRLIPLKSASQVGLWSARYIVDRINAFKPTSDRPFVLGLPTGGT PLNTYKRLIELHKAGEVSFQNVVTFNMDEYVGLPEDHPESYHSFMHNNFFSHIDIRPE NINILNGNAEDLVAECKRYEDKIKSYGKIHLFMGGVGNDGHIAFNEPASSLSSRTRVK TLTEDTRIANSRFFGGDMEQVPKLALTVGVGTLMDAEEIMILVTGHGKALALQAAVEG SVNHMWTISTLQLHPKGMMVCDEPSTMELKVKTVRYFQQLEAANIGRL" misc_feature 3001088..3001798 /locus_tag="B565_2670" /note="GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium. The reaction is an aldo-keto isomerization coupled with an amination...; Region: GlcN6P_deaminase; cd01399" /db_xref="CDD:73165" misc_feature order(3001178..3001189,3001268..3001273,3001466..3001471, 3001484..3001486,3001490..3001492,3001571..3001573, 3001679..3001681) /locus_tag="B565_2670" /note="active site" /db_xref="CDD:73165" misc_feature order(3001505..3001507,3001511..3001516,3001538..3001540, 3001703..3001723,3001745..3001753) /locus_tag="B565_2670" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:73165" misc_feature order(3001508..3001513,3001529..3001540) /locus_tag="B565_2670" /note="allosteric site; other site" /db_xref="CDD:73165" misc_feature order(3001544..3001546,3001553..3001585,3001595..3001603) /locus_tag="B565_2670" /note="active site lid [active]" /db_xref="CDD:73165" misc_feature order(3001559..3001561,3001673..3001675,3001685..3001687, 3001778..3001780,3001787..3001798) /locus_tag="B565_2670" /note="hexamer (dimer of trimers) interface [polypeptide binding]; other site" /db_xref="CDD:73165" gene 3001868..3003013 /locus_tag="B565_2671" /db_xref="GeneID:10488588" CDS 3001868..3003013 /locus_tag="B565_2671" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine-6-phosphate deacetylase" /protein_id="YP_004393323.1" /db_xref="GI:330830371" /db_xref="GeneID:10488588" /translation="MYALTNCTLYTGSCVLTGYGVLIEGDKIVAISHLAELPAGIEQI DLKGANLTAGFIDVQLNGCGGVMFNTEITVETLATMQAANLKSGTTSFLPTLITSPDA DMKQAVAVTRDYMAAHPNEVLGVHLEGPYTNLKRKGIHPAAQIRQPADEMIDFFCANA DAITKITLAPERNEPAHIRRLVEAGILVSAGHTAASYDQAMAGFDNGIRFATHLYNAM TPTLNGREPGVVGAIYDRKDVYAGIIVDGHHVHWANVRLAHKALGERLVLVTDATAAA GAPEGFEKFDFCGTTVFLRDGQCIDENGTLGGSSLTMIEGVENLVKQVGLPLDEALRM ASLYPARAIGWDSRLGSIQVGKVANLTVFDQDFTVRGTVVNGHYTQQ" misc_feature 3001871..3002995 /locus_tag="B565_2671" /note="N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to...; Region: NagA; cd00854" /db_xref="CDD:30034" misc_feature order(3002042..3002044,3002048..3002050,3002249..3002251, 3002282..3002284,3002441..3002443,3002504..3002506, 3002513..3002518,3002612..3002614,3002678..3002680, 3002783..3002785) /locus_tag="B565_2671" /note="active site" /db_xref="CDD:30034" misc_feature order(3002510..3002512,3002531..3002533,3002537..3002542, 3002546..3002548,3002567..3002572,3002609..3002620, 3002624..3002629,3002633..3002638,3002645..3002647) /locus_tag="B565_2671" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:30034" gene 3003075..3004232 /locus_tag="B565_2672" /db_xref="GeneID:10488589" CDS 3003075..3004232 /locus_tag="B565_2672" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine repressor" /protein_id="YP_004393324.1" /db_xref="GI:330830372" /db_xref="GeneID:10488589" /translation="MYRLIDLQGPISRVKIAELSQLAPASVTKITRQLIEHGLIKETS PQASTGGRRAISLTTIKHRFQFVSAKLGRGYLQLSLYDLDGKELDQHVIQVTEIDQQP VVDMLLREIGAFIDANRERCRNLISIALTMPGLVNPESGMVIYTPKYQIRNLGLAKLL ENHFNLPCYVGNDTRSLALAEHFFGESRDCMDSILVSVHQGTGSGIITKGQVFLGQNR NVGEIGHIQVEPLGKRCHCGNFGCLETIASNEAIIDKVKELISRGHQSALQEKHITIQ EVCKAALAGDELARSVIENVGEHLGRAVAITVNLFNPQKVLIAGEITAAEEILFPAIR RCVEHQSLPSFHRGLPIVKARFQNQPTYGGFALVKRALLEGDLLQIIMEQK" misc_feature 3003081..3003239 /locus_tag="B565_2672" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 3003264..3004199 /locus_tag="B565_2672" /note="Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]; Region: NagC; COG1940" /db_xref="CDD:32123" misc_feature 3003285..3003830 /locus_tag="B565_2672" /note="FGGY family of carbohydrate kinases, N-terminal domain; Region: FGGY_N; cl09121" /db_xref="CDD:195797" gene complement(3004304..3005920) /locus_tag="B565_2673" /db_xref="GeneID:10488590" CDS complement(3004304..3005920) /locus_tag="B565_2673" /codon_start=1 /transl_table=11 /product="integral membrane protein" /protein_id="YP_004393325.1" /db_xref="GI:330830373" /db_xref="GeneID:10488590" /translation="MRVTLGVLQTNLLLVLFFALVLNWPIFLHFYTVLSALTHVKAGF AISIPLVLIAALNAVFIPFTFRFVLKPFFTVLILTGSIVSYAMLKYGVIFDAGMIQNI VETNSGEAGAYLNGSVALWFLLTGLLPVLVLWSLRIRYPACWYQGVALRAGVLAISLL FIGGVASLYYQDYASVGRNNKSLAKEIVPANYVHGLYKYGRDVLFATPIPYQHLGTDA KVVARGSKPTLMFLVVGETARSQNYSLNGYGKATNSFTAKEQGVVSFKDVRSCGTATA VSVPCMFSNLTRRGYDDQLASSRDGLLDVLQHAGVSVLWKENDGGCKGVCRNVPTIEI LPKSYPALCQGESCYDEVLLEGLDQQIAGMKGNKLVAFHLMGSHGPTYFRRYPASERV FMPDCPRSDIENCSNEELVNTYDNTIRYTDKVVGLLIDKLKSLESQYDVGLVYLSDHG ESLGAMGLYLHGTPYKFAPDDQTRVPLLTWFSSQLQADRQLDMGCLAAEASSQRFSHD NLFHSMLGIMDVQTRVYDNKLDLFKPCRAG" misc_feature complement(3004313..3005791) /locus_tag="B565_2673" /note="putative metal dependent hydrolase; Provisional; Region: PRK11598" /db_xref="CDD:183224" misc_feature complement(3005300..3005770) /locus_tag="B565_2673" /note="Domain of unknown function (DUF1705); Region: DUF1705; pfam08019" /db_xref="CDD:149223" misc_feature complement(3004355..3005230) /locus_tag="B565_2673" /note="Sulfatase; Region: Sulfatase; cl10460" /db_xref="CDD:195965" gene 3006235..3007386 /locus_tag="B565_2674" /db_xref="GeneID:10488591" CDS 3006235..3007386 /locus_tag="B565_2674" /codon_start=1 /transl_table=11 /product="HD-GYP hydrolase domain-containing protein" /protein_id="YP_004393326.1" /db_xref="GI:330830374" /db_xref="GeneID:10488591" /translation="MFNTFKIKDQQQLDILRHLDLTLLMVDPDKSDLPIEPLLRGDIP DAGPDLDELEELIASGPPPFDEKAFRRSMRAADKAFGQSMSELRDALGALNLKPDEGL ANTAQIVRNAAFTLSQHEGPLGLHLIRSPHTDILLQHSLNVAFIAMLMARELGMNPIE LEETGLAGLIHDIGELKIPSQITQKRGDLSKAEQNFLNMHPQYGFDMLTQLNAFEPKI RQVAHLHHERLDGSGYPLGIKGGEIPPLARLIGLVDFYDELLHPRNSGNPAAPSQAIS QLYKLSQKKFDQNLVKLLVKVLGVYPPGSLVKLSDESIALVLSTEPTMPLKPKILPYI KAQRPEAVAMIDLREDERTITAFIKQEELDEGQRQFFNLTRRFCYYFAF" misc_feature <3006238..3006528 /locus_tag="B565_2674" /note="Domain of unknown function (DUF3391); Region: DUF3391; pfam11871" /db_xref="CDD:152307" misc_feature 3006640..3007041 /locus_tag="B565_2674" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature order(3006649..3006651,3006745..3006750,3006994..3006996) /locus_tag="B565_2674" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature 3006748..3006750 /locus_tag="B565_2674" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene 3007740..3009410 /locus_tag="B565_2675" /db_xref="GeneID:10488592" CDS 3007740..3009410 /locus_tag="B565_2675" /codon_start=1 /transl_table=11 /product="two-component system sensor histidine kinase" /protein_id="YP_004393327.1" /db_xref="GI:330830375" /db_xref="GeneID:10488592" /translation="MQLVLSLLQQMSVSLVIAYLFSKSPLLRPLANYSVRLPHKILIY IIFSSFCILGTYVGLDIDDAIANTRAVGAVLGGLLGGPLVGFLVGLTGGLHRYTLGGF TDLACAISTTCEGLLGGIVHWRLMRSGRTDALFEPRIAFFTTLYAEIMQMVIILLVAT PFDKSLLLVRTIATPMILANSCGAALFISMIRDQQRMYEKFSRVFSAKALNIANRTVG IMSQGFTPEASNKIARIIQEETGVGAVAITDTEQILAFIGTGEDHHLPGTPIASAITM QAIAQNKVLFADGNSQPYRCSLSSACQLGSVLVIPLQGDKGVIGTIKLYEPKKRLFLK INHTLGEGIANLLSQQLLAGRLEQHQRLLVQSELKLIQAQINPHFLFNTLNTISAITR RDPDKARDLLLHLSLFFRKNLKRQSGLATLQEEQEHCQSYLEIELARFGDRLTVINEI PPHLATLRLPSFTLQPLIENAIKHGISTLLEQGRIRLYTDEQPASVTIHVEDNAGTWQ AHPAGDGLGMTIVDRRLKSAFGERYGVTIACEPEQWTRVSFTIPKEQP" misc_feature 3007788..3009404 /locus_tag="B565_2675" /note="Putative regulator of cell autolysis [Signal transduction mechanisms]; Region: LytS; COG3275" /db_xref="CDD:33086" misc_feature 3007845..3008105 /locus_tag="B565_2675" /note="Protein of unknown function (DUF1393); Region: DUF1393; cl01942" /db_xref="CDD:194214" misc_feature 3008415..3008813 /locus_tag="B565_2675" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" misc_feature 3008838..3009077 /locus_tag="B565_2675" /note="Histidine kinase; Region: His_kinase; pfam06580" /db_xref="CDD:191560" misc_feature 3009129..3009401 /locus_tag="B565_2675" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cl00075" /db_xref="CDD:193644" gene 3009407..3010111 /locus_tag="B565_2676" /db_xref="GeneID:10488593" CDS 3009407..3010111 /locus_tag="B565_2676" /codon_start=1 /transl_table=11 /product="two-component system response regulator" /protein_id="YP_004393328.1" /db_xref="GI:330830376" /db_xref="GeneID:10488593" /translation="MIRTLIVDDEHYAREELRQQLACDPAIEIVGEAANAIEALPLIQ RLKPDVVFLDIQMPKLSGMELVAMLDPLPRIVFVTAFDEYAIQAFEENAFDYLLKPVE PARLAKTLARLKQDISPQPIERLAPTIEHIPGYLHNRVRLLPIAQVEYAFSDLGGVHV ACQGELFHTQLTLKSLEEKSPLLRCHRQYLVSPNAIFEIRLLDNQLAEIVTPSGARVP VSRRYLKELKDQLGLD" misc_feature 3009407..3010105 /locus_tag="B565_2676" /note="putative two-component response-regulatory protein YehT; Provisional; Region: PRK11697" /db_xref="CDD:183278" misc_feature 3009419..3009745 /locus_tag="B565_2676" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(3009428..3009433,3009566..3009568,3009590..3009592, 3009641..3009643,3009692..3009694,3009701..3009706) /locus_tag="B565_2676" /note="active site" /db_xref="CDD:29071" misc_feature 3009566..3009568 /locus_tag="B565_2676" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(3009575..3009580,3009584..3009592) /locus_tag="B565_2676" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 3009701..3009709 /locus_tag="B565_2676" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 3009818..3010093 /locus_tag="B565_2676" /note="LytTr DNA-binding domain; Region: LytTR; cl04498" /db_xref="CDD:156100" gene 3010252..3011673 /locus_tag="B565_2677" /db_xref="GeneID:10488594" CDS 3010252..3011673 /locus_tag="B565_2677" /codon_start=1 /transl_table=11 /product="carbon starvation protein A" /protein_id="YP_004393329.1" /db_xref="GI:330830377" /db_xref="GeneID:10488594" /translation="MIWFFLCVGLLVAGYFIYGKFIERIFSPKPELKTPAITMADGVD YVPMSDKKVYLVQLLNIAGVGPIFGPILGALYGPVAMLWIVFGCIFAGAVHDYFSGML SVRAKGASVPTVVGEHLGTAAKHFMNLFAVVLLMLVGVVFVLSPAGLLANLTSTDLVY WIVAIFAYYILATIVPIDKIIGRFYPIFGALLVFMSVGLIVGLIASGKGFYNTGMDFS NLHPTELPLWPLLFITIACGAVSGFHATQSPLMARCMQNEKSGRFIFYGAMIGEGIIA LIWCTLGLSFYDSTEALNATMANGGPAAVVHEVSTSLLGTVGGILAILGVVILPITSG DTAFRSARLIVADFLKMTQKPLAKRLLIAIPMFILGFIISKAEFGVIWRYFGWANQTT AVIMLWAAAAYLIKEGKLHWICTIPAMFMTAVVITYLANAPIGFGLEMGTSTIIGLTA TAAITVAFLMKFRQPLVSSTSEG" misc_feature 3010252..3011553 /locus_tag="B565_2677" /note="Carbon starvation protein CstA; Region: CstA; cl00856" /db_xref="CDD:193955" gene 3011896..3012234 /locus_tag="B565_2678" /db_xref="GeneID:10488595" CDS 3011896..3012234 /locus_tag="B565_2678" /codon_start=1 /transl_table=11 /product="DNA repair ATPase" /protein_id="YP_004393330.1" /db_xref="GI:330830378" /db_xref="GeneID:10488595" /translation="MALDYFALGLLVFVGLVIFYGVIVIHDIPYEIAKHRNHPHQDAI HVAGWVSLFTLHVLWPFLWIWATIYRPDRGWGFSQRLQKDEEELAALKQELADLKSRI NTIEQSEQQG" misc_feature <3011971..3012132 /locus_tag="B565_2678" /note="Protein of unknown function (DUF3302); Region: DUF3302; pfam11742" /db_xref="CDD:152178" gene 3012238..3013275 /locus_tag="B565_2679" /db_xref="GeneID:10488596" CDS 3012238..3013275 /locus_tag="B565_2679" /codon_start=1 /transl_table=11 /product="secretion protein HlyD" /protein_id="YP_004393331.1" /db_xref="GI:330830379" /db_xref="GeneID:10488596" /translation="MDLLLILTYTALCVAIFKIFRIPLNKWTVPTAALGGVLLIGTLI MLMNYNHPYSEMARNYYVSTPIVPLVKGRVVEVPVQANQPVKKGDVLFRLDDEPFRLK VDSLTARVESNREHLKSIEARLRSARLDRDRASDLMRRGVGKQRDLDVTQANVDDIVA QIDQQKATLNDLQAQLMEAKYQQSQTVVYAPSDGHVVQLALRPGMIATPFMYRPVMTF IHKDDTAYVGWFWQNSMQRLAVGDEAEVVIDGVPGKIFKGKVTAVVPAIAAGNVQANA GLLDQTTAVRPGRLPVVISITDPEWAKYQMIAGASGQAAVYTQYFHHVSVMRKILLRM ASWMNYIFPFH" misc_feature 3012250..3013206 /locus_tag="B565_2679" /note="Multidrug resistance efflux pump [Defense mechanisms]; Region: EmrA; COG1566" /db_xref="CDD:31754" gene 3013324..3015150 /locus_tag="B565_2680" /db_xref="GeneID:10488597" CDS 3013324..3015150 /locus_tag="B565_2680" /codon_start=1 /transl_table=11 /product="putative helicase, ATP-dependent" /protein_id="YP_004393332.1" /db_xref="GI:330830380" /db_xref="GeneID:10488597" /translation="MWRQAPYNGATLRRTMPKRHAPMFVLRPYQTDAVNAVISHFRKH PDPAVVVLPTGAGKSLVIAELARKARGRVLVLAHVKELVEQNHGKYEAWGLKADIFAA GLDRKEASAQVVFGSVQSVARNLAAFDGAFSLLIIDECHRVSLDDDSQYHQVIDHLKA ANPALKILGLTATPYRLGLGWIYRRHYHGMVKSHGERLFGDCVFELPLRFMVKNGYLT PPRMVDAPIVHYDFSKLVPRENGLFSEADLNGELKRQQRVTPHILSQVLEYAADRQGV MIFAATVEHAREIHGLLGARGQQAALITGETPGPERDALINAFKARELKFLVNVAVLT TGFDAPHVDLIVMLRPTESVSLYQQIVGRGLRLSPGKSDCLVLDYAGNNFNLFAPEVG EPRPHAGTEPVQVPCPACGFANTFWGKTDEDGKVIEHYGRRCQGLFEDDEGNREECDY RFRAKICPGCGAENDIAARRCQSCVQLLVDPDDKLKEALNLKDCMVIRCAGLTLSTGH GKQGERLEVTYHDEDGLTLSEYFGFHSPGARRLFQQHFVRHHWPAPGLEPEFATLASV MAAQSQFRHPDFVIARKSGRFWQIKEKIFDYEGRYRTANSMT" misc_feature 3013468..3013845 /locus_tag="B565_2680" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 3013486..3013500 /locus_tag="B565_2680" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 3013735..3013746 /locus_tag="B565_2680" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature 3014107..3014454 /locus_tag="B565_2680" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(3014164..3014175,3014233..3014238,3014311..3014319) /locus_tag="B565_2680" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(3014335..3014337,3014398..3014400,3014410..3014412, 3014419..3014421) /locus_tag="B565_2680" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene 3015263..3016702 /locus_tag="B565_2681" /db_xref="GeneID:10488598" CDS 3015263..3016702 /locus_tag="B565_2681" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase" /protein_id="YP_004393333.1" /db_xref="GI:330830381" /db_xref="GeneID:10488598" /translation="MQRLLIGFCALFSSLAAHAAPLTPPQGGQYAIMVQGNNGVEFAR HADQMIAPASTMKVLTALAARLELGADFRFATDIQAQPGAKQGDTINGDIWINFVGDP TLSRMDLLALFKQLGVTSIKGNVYVNTGAYNGYERGNGWSWGDQTLCFAAPVSSVIID KNCAYGTITATQIGKPAVGNVATGVPIGIGADNVEVMSYGDMARQFCALEVDMAKGNF YELKGCITPNKEPQGLRFAIHDVEAWGWDNIRWAMNRAGIKHDGLLRVTHKAPEGAET LGTHYSVSLPVMLAKMLKKSDNLYADTFLKTVGRHYYNKPGSYRSGTMAVRAILTKNG IDLGNATLADGSGLSAHNLISARQMMSVLNFIQKNDAELGLIKLLPSSQVDGTLAWRR SVTAPMMKNKVHAKTGTITGTSNLVGFIDTAGGQRKAFVMFQRGLSQDPATHERYRAS KAPWPWTVFEKGVLESIYQQQPIQIADES" misc_feature 3015269..3016672 /locus_tag="B565_2681" /note="Beta-lactamase; Region: Beta-lactamase; cl01009" /db_xref="CDD:194006" gene 3016830..3017093 /locus_tag="B565_2682" /db_xref="GeneID:10488599" CDS 3016830..3017093 /locus_tag="B565_2682" /codon_start=1 /transl_table=11 /product="glutaredoxin 1, redox coenzyme for ribonucleotide reductase" /protein_id="YP_004393334.1" /db_xref="GI:330830382" /db_xref="GeneID:10488599" /translation="MFAVIFGRPGCPYCVRAVQIAEQLTEQRDDFKFRYVDIHAEGIT KEDLAKSAGKPVNTVPQIFLDEQHIGGCTDFEAYAKANLGLYQ" misc_feature 3016839..3017069 /locus_tag="B565_2682" /note="Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide...; Region: GRX_family; cd02066" /db_xref="CDD:48495" misc_feature order(3016851..3016853,3016860..3016868,3017001..3017006) /locus_tag="B565_2682" /note="GSH binding site [chemical binding]; other site" /db_xref="CDD:48495" misc_feature order(3016860..3016862,3016869..3016871) /locus_tag="B565_2682" /note="catalytic residues [active]" /db_xref="CDD:48495" gene complement(3017198..3018043) /locus_tag="B565_2683" /db_xref="GeneID:10488600" CDS complement(3017198..3018043) /locus_tag="B565_2683" /codon_start=1 /transl_table=11 /product="endonuclease/exonuclease/phosphatase family" /protein_id="YP_004393335.1" /db_xref="GI:330830383" /db_xref="GeneID:10488600" /translation="MKNSYRILGTSLLTLGLVGCFEVPDQNHLVTAQGIVPGLDCQRP PLVALATTALPREFGVTVWNLYKGQRKNWREGMDSYAKGQDLVLLQESATRPDMLDWL RAGDFQWQQLQAFTQGGVSFGVMTVAKTPQAFVCGVRSPEPLLRIPKSGLVSLYPLQG DPDGVMVINIHAVNFELGMATFREQLNDLTALVRRHQGPVILAGDFNTWSDKRQFWLS KLVDELGLQEAVPVPDLRRTAFGRPLDHLYYRNLDLVEVSSPATDSSDHNPIIARFAA QSVTP" misc_feature complement(<3017369..>3017512) /locus_tag="B565_2683" /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; Region: EEP; cl00490" /db_xref="CDD:197411" gene 3018211..3018375 /locus_tag="B565_2684" /db_xref="GeneID:10488601" CDS 3018211..3018375 /locus_tag="B565_2684" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393336.1" /db_xref="GI:330830384" /db_xref="GeneID:10488601" /translation="MELATVYQIRRDPQCDLCLFDTLQYVGSEEMLERMIRQKTGLEQ EISIINARLI" gene complement(3018376..3018825) /locus_tag="B565_2685" /db_xref="GeneID:10488602" CDS complement(3018376..3018825) /locus_tag="B565_2685" /codon_start=1 /transl_table=11 /product="acyl-CoA thioester hydrolase YciA" /protein_id="YP_004393337.1" /db_xref="GI:330830385" /db_xref="GeneID:10488602" /translation="MIAPYHAAIHEREAVMMVDTKRHPDGELLLRTLAMPADTNPNGD IFGGWIMSQMDIGGGIMAKELAKGRICTVSVEGMTFHSPVKVGDVVCCYGRCMKIGRS SMKLKLEVWVKPVLRENDAQRYCVTEGIFTYVAIDEQGKSRPVPVSA" misc_feature complement(3018388..3018765) /locus_tag="B565_2685" /note="Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain...; Region: BFIT_BACH; cd03442" /db_xref="CDD:48037" gene complement(3018840..3019673) /locus_tag="B565_2686" /db_xref="GeneID:10488603" CDS complement(3018840..3019673) /locus_tag="B565_2686" /codon_start=1 /transl_table=11 /product="NAD dependent epimerase/dehydratase family protein" /protein_id="YP_004393338.1" /db_xref="GI:330830386" /db_xref="GeneID:10488603" /translation="MTEQYIAGTIGILGAGWLGLPLARALLAAGKPVAVTVSSAEKAA RLQGEGIDAHPLTISAEMPVADQQAPWPIPCESLVICVPPSKTDDYPQAVAKACSLAK ANGTRRVLFVSATSVWGAGQQEGEEPQPRHARGERMLAAEQAVLAAGFEAVMIVRPSG LYGPDRHPGRFLAGKTLDGGAQSVNLVHLDDVVAACILLLERGKDGDVFNLSAPVHPR REQFYPFAARQQGLPVPVFIEPAGEFQPIDGQLICQQMGFNYRWPDPAHWFAELAASG N" misc_feature complement(3018912..3019577) /locus_tag="B565_2686" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(order(3019191..3019202,3019260..3019262, 3019272..3019274,3019332..3019340,3019425..3019433, 3019557..3019565)) /locus_tag="B565_2686" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature complement(order(3019260..3019262,3019272..3019274, 3019332..3019334)) /locus_tag="B565_2686" /note="active site" /db_xref="CDD:187535" gene complement(3019850..3021172) /locus_tag="B565_2687" /db_xref="GeneID:10488604" CDS complement(3019850..3021172) /locus_tag="B565_2687" /codon_start=1 /transl_table=11 /product="putative inner membrane protein" /protein_id="YP_004393339.1" /db_xref="GI:330830387" /db_xref="GeneID:10488604" /translation="MEILNNRECAVLFWLAVLSLYIFTSSKEDGFRSAFINLCSTLFV KKVIVVLFYMLCYVGVVVYWLSELGLWNSEQLKNTIFWCASVGFMSLFKLESIKKDKH FFKHSVTDNLKLLAVFQFVVGVYTFPLWIEILLVPILAMAGSMFSIAESDKKYHQVRV LLEHIFSFFGFLLIVYTIYNLTTDFAGFGKINTVYDFFVPPLLTLCYLPFIYSMLIYS TYEQEFLNLENSISNKWHLWLAKIYAILFFNVQLQLLKRWRHRVRMVKVDSYADLWGT FKYIFTVMSAEKSQKDIPKELGWNPYRAKEFLMDEGVKTGFYNELFENEWFAASQMND IGEGFPPDNIAYYIEGTKDVVKVLKIKLNVNDARRTRQALDKLDAFAERLSFFSLNKP LSIRMKNAILQCESYTEKYQDKTVSLLVEKWPDHKFHGYEVKFIISSM" gene complement(3021423..3024998) /locus_tag="B565_2688" /db_xref="GeneID:10488605" CDS complement(3021423..3024998) /locus_tag="B565_2688" /codon_start=1 /transl_table=11 /product="ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase" /protein_id="YP_004393340.1" /db_xref="GI:330830388" /db_xref="GeneID:10488605" /translation="MKHELIMVDGNEAAARVAYQLSEVCAIYPITPSSTMAELADAWA AEGQTNLWGNIPTVVEMQSEGGAAGTVHGALQAGALATTFTASQGLMLMLPNMYKIAG ELTSAVFHVAARSLAAQGLSIFGDHQDVMAARSTGFAMLASGSVQEAQDLALVAHSVT LQCRVPFIHFFDGFRTSHEVNKITALHRDEIRALIDNDWVRAHRARALNPDHPVMRGT AQNPDTYFQSRESVNPFYEAVPARVQQCMDNLGELTGRHYRLVEYHGAPDATDVIVLM GSGAATARTTVDWLNQQDRKTGVLVVRLYRPFPVQALLDALPASVRRMAVLDRTKEPG AGGEPLLLDVQSALIDGLQRGLIKRLPWLSGGRYGLSSKEFTPAMCAAVFEELASDAP RPRFTVGIVDDVSGLSLAWHPIGDLEPASRVRALFFGLGADGTVGANKNSIKIIGELE GFHAQGYFVYDSKKSGSRTVSHLRFGPEPIDAPWLIEQASFIGCHQWGFVESVDLLEH AAEGATLLLNAPYEADRVWAELPERLRARIRALDIRLYCIDGDRVAEQNGMGNRINTI MQTCFFALAGILPRDEAIALIKESIEKSYARKGPEVVARNFAAVDDTLAHLCKVAIPV GDEQISDYPLPLAPGGSEFVQRVTGEMLAGRGDLIPVSMLPVDGTYPTATSRFEKRDI AREIPIWHSDICIQCGNCVFVCPHAALRAKFYHQDWLATAPEAAQSVPVTAKGFPDSR YTLQLYPEDCTGCGQCVQACPVRAGADESHEGERAIAMMDKAPHLAGQKQALRWFESL PWPARERVDFSTVRGAQFLEPLFEFSGACAGCGETPYLKLLTQLFGDRMLVANATGCS SIYGGNLPTTPWAKNSEGKGPAWSNSLFEDNAEFGFGFRLTADQHHGQAVAALQAMKG ELGEALVESLINAPQRLESEIRAQRTRVVQVRERLEEVKSGKARELLSLIDQLVRRSV WIIGGDGWAYDIGSAGLDHVLASGRDVNVLVMDTEVYSNTGGQMSKSTPLGAVAKFAA GGKTLAKKDVALQAISYGNVYVARIAFGANPQQALQALREAEAYPGPSLIIAYSHCIA HGIDMEFGLTQQKRAVASGHWPLMRYNPVLRRSGQNPFSLDSLRPSIPLAEYRQEETR YRVLAQSHPEEAERLMQVAQQVAWQKWATYEEMATREASHFHPPV" misc_feature complement(3021459..3024986) /locus_tag="B565_2688" /note="pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; Region: pyruv_ox_red; TIGR02176" /db_xref="CDD:131231" misc_feature complement(3024480..3024971) /locus_tag="B565_2688" /note="Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins; Region: TPP_PYR_PFOR_IOR-alpha_like; cd07034" /db_xref="CDD:132917" misc_feature complement(order(3024594..3024599,3024648..3024653, 3024690..3024692,3024702..3024704,3024711..3024713, 3024762..3024764,3024768..3024770,3024777..3024785, 3024789..3024794,3024813..3024824,3024885..3024887, 3024894..3024896,3024906..3024908,3024924..3024929)) /locus_tag="B565_2688" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132917" misc_feature complement(order(3024702..3024704,3024711..3024713, 3024762..3024764,3024768..3024770,3024777..3024785, 3024789..3024794,3024813..3024824,3024885..3024890, 3024906..3024908,3024912..3024917,3024924..3024929)) /locus_tag="B565_2688" /note="PYR/PP interface [polypeptide binding]; other site" /db_xref="CDD:132917" misc_feature complement(order(3024807..3024809,3024912..3024914)) /locus_tag="B565_2688" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132917" misc_feature complement(order(3024657..3024659,3024906..3024908)) /locus_tag="B565_2688" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:132917" misc_feature complement(3023115..3023735) /locus_tag="B565_2688" /note="Pyruvate ferredoxin/flavodoxin oxidoreductase; Region: POR; cl00546" /db_xref="CDD:193862" misc_feature complement(3022950..3023108) /locus_tag="B565_2688" /note="Domain of unknown function; Region: EKR; pfam10371" /db_xref="CDD:192558" misc_feature complement(3022872..3022943) /locus_tag="B565_2688" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" misc_feature complement(3022707..3022760) /locus_tag="B565_2688" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" misc_feature complement(3021459..3022544) /locus_tag="B565_2688" /note="TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes. This subfamily also includes proteins characterized as...; Region: TPP_PFOR_PNO; cd03377" /db_xref="CDD:48186" misc_feature complement(order(3021963..3021971,3021975..3021977, 3021981..3021983,3022059..3022070,3022344..3022349, 3022434..3022436,3022503..3022505)) /locus_tag="B565_2688" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:48186" misc_feature complement(order(3021474..3021476,3021528..3021530, 3021537..3021539,3021543..3021545,3021552..3021554, 3021564..3021566,3021714..3021725,3021735..3021740, 3021861..3021863,3021870..3021875,3021885..3021887, 3021897..3021899,3021909..3021911,3021918..3021920, 3021924..3021926,3021945..3021947,3021960..3021965, 3022008..3022010,3022026..3022031,3022041..3022043, 3022089..3022091,3022104..3022106,3022278..3022280, 3022287..3022289,3022296..3022301,3022308..3022313, 3022317..3022322,3022329..3022334,3022341..3022343, 3022350..3022367,3022371..3022379,3022401..3022403, 3022416..3022418,3022458..3022466)) /locus_tag="B565_2688" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48186" gene complement(3024995..3026641) /locus_tag="B565_2689" /db_xref="GeneID:10488606" CDS complement(3024995..3026641) /locus_tag="B565_2689" /codon_start=1 /transl_table=11 /product="pyridine nucleotide-disulfide oxidoreductase family protein" /protein_id="YP_004393341.1" /db_xref="GI:330830389" /db_xref="GeneID:10488606" /translation="MSKQLDMTALPDLSLKTGTGPVRTRLPVWRPALPPCNHACPAGE NIQAWLSLAQAGRFEAAWQTLIEENPLPAIHGRVCYHPCESACNRGQVDESVSIHAIE RFLGDEALARGWQPAPPAPASGKKVLVIGAGPSGLSCAWHLNRLGHQVEIREAGPLAG GMLRFGIPAYRLPRDVLDREVARIVAAGVTLTLNHKVEDVLRERDEGGFDAVFMAIGA HLAKRVDIPAREAGKILDAVSFLEQASLAEEQGLPPPKLGRRVAIYGGGNTAMDAART ARRLGVEEAMIIYRRDRDHMPAHAFEADEAEEEGIKINWLRSIRQLDNANIEVEVMTL DAEGKPVPTGKFETLEADSLILALGQEVDLSVLESIPGVRVNKEGVVQVAGNLMTDVP GLFAGGDMVPSERTVTIATGHGKKAARHMDAWLRGRHYHKPLSYPLVGPEQLQLWFQT HAPASSQPVKPAWARDDFGEIIGGLDEVAARYEAARCYSCGNCFECDGCYGSCPEQAI AKLGPGKGYQVDAARCTGCGACYDQCPCHAIELRQPEESQ" misc_feature complement(3025007..3026641) /locus_tag="B565_2689" /note="putative glutamate synthase (NADPH) small subunit; Provisional; Region: PRK12771" /db_xref="CDD:183735" misc_feature complement(<3026120..3026266) /locus_tag="B565_2689" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(3025022..3025093) /locus_tag="B565_2689" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" gene complement(3026818..3027570) /locus_tag="B565_2690" /db_xref="GeneID:10488607" CDS complement(3026818..3027570) /locus_tag="B565_2690" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter/signal transduction systems periplasmic component-like protein" /protein_id="YP_004393342.1" /db_xref="GI:330830390" /db_xref="GeneID:10488607" /translation="MKISWLLAGSLFCHGLWAQELTLTTGEYPPYCSETLKYQGLIPH VVSEAFRSEGVSVKFQFLPWKRAFHLSEEGVVDGTVHWYESSERRKTHLYSDPILSET YVWFYLKSDPLEWRGYQDLADRKLAAVSGYTYNADFFAAIAQVPLQVQFVTRLRQSFD LLLSGRADLTLENIDVGYYSLRQFYPASTVDLFATHSKPVMKVEGHLLISRKRANADE LIKTFNRGLAKLKASGQLEKMLLESRSGLYEP" misc_feature complement(3026857..3027501) /locus_tag="B565_2690" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature complement(3026857..3027501) /locus_tag="B565_2690" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature complement(order(3027055..3027057,3027172..3027174, 3027307..3027309,3027379..3027381,3027487..3027489)) /locus_tag="B565_2690" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature complement(order(3027073..3027075,3027091..3027093, 3027103..3027105)) /locus_tag="B565_2690" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature complement(3026944..3026961) /locus_tag="B565_2690" /note="hinge residues; other site" /db_xref="CDD:29040" gene 3027648..3029498 /locus_tag="B565_2691" /db_xref="GeneID:10488608" CDS 3027648..3029498 /locus_tag="B565_2691" /codon_start=1 /transl_table=11 /product="Flavodoxin reductase family 1 protein" /protein_id="YP_004393343.1" /db_xref="GI:330830391" /db_xref="GeneID:10488608" /translation="MFPFFQAIAPRHKDMKMPRLDSIHLYPIKSTAGMPLARARVTEE GLAGDRRYMVVKPDGTFITARTHPQLQQVVATPIEGGLQLRYPGFEPLTLQEVDFSRA PQATGVWSDRFTALHTDPKADGWLSRVAGETVQLLWLGETSDRFREKTGTRVSFADGY PLLLISQASLEDLNLRSDALHQMSQFRTNLVASNTQPFEEDSWVRIRIGEVEFKVVKP CSRCIMTTVEAGTDRFNALKEPLATLTRYRRGEDGEVYFGQNLVALNEGWIEAGSEIE VLERTRPVVYPAAAPKKRELVCVAREPLARDLETFWLEAADGEPLPDYLPGQHLPISL DIKNERIQRRYTLSSTPDHPERYSISVKKVEGGRISHWLHQQLQVGDRLLAANPAGEF HLGSERNLLLLSAGSGVTPMLAIARTLALRGELEEVHFMHLCRSEADIPAASELHAMA QQGMTLTIILSQPDNHWQGLQRRLNDEHLQLVKGLAEKEVFICGPHGFMADAAAKVAA LGVPAARIRQESFGGAILSVARPHQAVQLRIGAQAFTGNNQGTVLDQANKQGVELPWS CRAGICGSCKQTLISGEVDHPDAPAITAAELAEGKILACCAVPLTDLEIL" misc_feature 3027696..3028508 /locus_tag="B565_2691" /note="Uncharacterized Fe-S protein [General function prediction only]; Region: COG3217" /db_xref="CDD:33030" misc_feature 3027696..3028043 /locus_tag="B565_2691" /note="MOSC N-terminal beta barrel domain; Region: MOSC_N; pfam03476" /db_xref="CDD:146229" misc_feature 3028086..3028478 /locus_tag="B565_2691" /note="MOSC domain; Region: MOSC; pfam03473" /db_xref="CDD:146227" misc_feature 3028527..3029315 /locus_tag="B565_2691" /note="Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion]; Region: Hmp; COG1018" /db_xref="CDD:31221" misc_feature 3028533..3029210 /locus_tag="B565_2691" /note="Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron...; Region: FNR_iron_sulfur_binding_1; cd06215" /db_xref="CDD:99811" misc_feature order(3028632..3028634,3028674..3028685,3028725..3028733, 3028737..3028739,3028749..3028757,3028866..3028868, 3028875..3028877,3029202..3029204,3029208..3029210) /locus_tag="B565_2691" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99811" misc_feature order(3028674..3028676,3028680..3028685) /locus_tag="B565_2691" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99811" misc_feature order(3028746..3028748,3028755..3028757,3028764..3028766, 3028785..3028787,3028809..3028811,3028815..3028817) /locus_tag="B565_2691" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99811" misc_feature order(3028851..3028853,3028863..3028874,3028878..3028880) /locus_tag="B565_2691" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99811" misc_feature order(3028866..3028871,3028944..3028952,3029127..3029132) /locus_tag="B565_2691" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99811" misc_feature 3029250..3029492 /locus_tag="B565_2691" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature order(3029334..3029339,3029346..3029348,3029355..3029357, 3029361..3029372,3029457..3029462) /locus_tag="B565_2691" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature order(3029346..3029348,3029361..3029363,3029370..3029372, 3029460..3029462) /locus_tag="B565_2691" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" gene 3029721..3031433 /locus_tag="B565_2692" /db_xref="GeneID:10488609" CDS 3029721..3031433 /locus_tag="B565_2692" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004393344.1" /db_xref="GI:330830392" /db_xref="GeneID:10488609" /translation="MEQNKPAFQLNLLLSVITLILLSLVFFAYSWAGKQLEESYRQQY VSYLLADELRQSSDDLTRLGRTYVITKDPAYEQQYMRILAIRNGEQPRPDGYNRIYWD FVAANGQNPRPDSNVRRGLIDLMKDAGFTDGELAKLNEAKNNSDALVNTEVAAFKLVQ QTDGDPVANQQKAIAMMHDKAYHQNKGRIMSPIDDFYVMMEQRNHEAVESAIANTDML RYLFIALGLVLMFFLWRTYRSLLDLVGTSVEQLKTDLHMMAEGDFSRPIKVPAGSKES LIGLLGGMQTTLKGIIAKVSHSTEELSHSADSIAQIAEQTAQFATDQQTSTQTMAAAI EELVVSISHLSDNATHADELSKVSANTLEEGSGVIKETLGSIENISTTVGDAASTISE LNGHTQQISEIIGVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRSA ASTQQITGMISKIQSGADASIRSMENTVNNVSRGVTLANQTGEAIASIQSHASNLTGL MGEISHTLREQSTAANEVVSTVGNITSLSEQSGDAARHVSQEAAKLKQLSRVLRQEMG HFKL" misc_feature 3030645..3031427 /locus_tag="B565_2692" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 3030828..3031406 /locus_tag="B565_2692" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(3031511..3032383) /locus_tag="B565_2693" /db_xref="GeneID:10488610" CDS complement(3031511..3032383) /locus_tag="B565_2693" /codon_start=1 /transl_table=11 /product="putative protease htpX" /protein_id="YP_004393345.1" /db_xref="GI:330830393" /db_xref="GeneID:10488610" /translation="MKRIMLFLVTNLAVMLVLGVVLNILFSVLGINKSSISGLLVFCA VFGFGGSFISLLMSKWMAKRSYGVQVIEQPRNETEHWLVSTVARQAREAGIKMPEVGI YDSPEMNAFATGARRDDSLVAVSSGLLYSMSRDEAEAVLAHEVSHVANGDMVTLTLIQ GVVNTFVMFFARIVAGVISNFFSSNNDEESSSTGGFAYMITVFVLEMLFGILASIIVM WFSRQREFRADAGAAKLAGRDKMIAALERLSRGAEPQLEGSMMAFGINGKRSMSELFM SHPPIEQRIAALRG" misc_feature complement(3031517..3032383) /locus_tag="B565_2693" /note="Peptidase family M48; Region: Peptidase_M48; cl12018" /db_xref="CDD:187163" gene complement(3032497..3033174) /locus_tag="B565_2694" /db_xref="GeneID:10488611" CDS complement(3032497..3033174) /locus_tag="B565_2694" /codon_start=1 /transl_table=11 /product="Dethiobiotin synthetase" /protein_id="YP_004393346.1" /db_xref="GI:330830394" /db_xref="GeneID:10488611" /translation="MKSFFITGTDTDVGKTLVARTLLREFSAQGIKCAGYKPVSAGCA RTPDGLRNLDAVLLQEAASLPLPYEVVNPFAYEPPIAPHIAASEARQPITMQGLSEGL RKIEQAGAELAVVEGAGGWYLPLDRKHLLSDWVKQENMAVIMVVGAKLGCLNHALLTF AAIRNDQLPVAGWVINRLHGSMSHYQENLDTLRGLLPAPFLGEIPFINNPLEADLQGR LDISPLL" misc_feature complement(3032557..3033165) /locus_tag="B565_2694" /note="CobQ/CobB/MinD/ParA nucleotide binding domain; Region: CbiA; pfam01656" /db_xref="CDD:145019" misc_feature complement(3032647..3033162) /locus_tag="B565_2694" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" misc_feature complement(3032560..>3032814) /locus_tag="B565_2694" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" gene complement(3033234..3034049) /locus_tag="B565_2695" /db_xref="GeneID:10488612" CDS complement(3033234..3034049) /locus_tag="B565_2695" /codon_start=1 /transl_table=11 /product="biotin biosynthesis protein BioC" /protein_id="YP_004393347.1" /db_xref="GI:330830395" /db_xref="GeneID:10488612" /translation="MAERFQTVDKAQLARRFGAAARHYDAHARFQQEVGQALLEWMPD RLVGTELTVSGLDLGCGTGFFLPQLASRCHQLVGLDLAPGMLAQAALRGSGARLLCGD AEQLPFADNTFDWVFSSLALQWCERPAQAFGELLRVVKPGGQIFFSTLLDESLWQLRA AWQQLDGRAHVNRFLSLPQLEQALASAGVSAPELRCITWDLAYLELPQLLRDLKGIGA NQVNDNQGSAAPAGLSGRARLQQLTQAYEAFRQPDGRLVASYRVCLGRLSKPR" misc_feature complement(3033243..3034004) /locus_tag="B565_2695" /note="biotin biosynthesis protein BioC; Region: BioC; TIGR02072" /db_xref="CDD:162684" misc_feature complement(3033597..3033884) /locus_tag="B565_2695" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(3033693..3033695,3033741..3033749, 3033807..3033812,3033858..3033878)) /locus_tag="B565_2695" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(3034042..3035205) /locus_tag="B565_2696" /db_xref="GeneID:10488613" CDS complement(3034042..3035205) /locus_tag="B565_2696" /codon_start=1 /transl_table=11 /product="8-amino-7-oxononanoate synthase" /protein_id="YP_004393348.1" /db_xref="GI:330830396" /db_xref="GeneID:10488613" /translation="MGAALAEREQAGLLRNRIATDGASGGRLRVAGRDYLNFSANDYL GLADHPAIKAAFNAGIERYGTGSGASPLVTGYSHAHQQLEETLAEWLGVEAVLLFNCG FSANQAVLKALLGKEHLLWQDKLNHASLQEMGSQLPCKMKRFAHNDMAALERQLEPNR GLIVSEGVFSMDGDQAPWGELAALAARSGNWLMIDDAHGLGVQGPEGRGTLAAQGVPP ASVHIQMGTFGKALGVAGAFVGGSRELVEYLVNFARHYVYSTHMPAAQACAVSKSIEL VRAADKSRAHLGQLIARFRQGAKAQGWLLGASDTPIQPLLVGESFAALQLAERLRERG VWVSAIRPPTVPVGTARLRITLSAAHREQDVDRLLDALGVCPAATTLGEAHYG" misc_feature complement(3034090..3035196) /locus_tag="B565_2696" /note="7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]; Region: BioF; COG0156" /db_xref="CDD:30505" misc_feature complement(3034090..3035109) /locus_tag="B565_2696" /note="KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-...; Region: KBL_like; cd06454" /db_xref="CDD:99747" misc_feature complement(order(3034147..3034149,3034516..3034518, 3034525..3034527,3034612..3034617,3034621..3034623, 3034693..3034698,3034708..3034710,3034825..3034827, 3034897..3034905,3035083..3035085)) /locus_tag="B565_2696" /note="substrate-cofactor binding pocket; other site" /db_xref="CDD:99747" misc_feature complement(order(3034516..3034518,3034525..3034527, 3034612..3034617,3034621..3034623,3034696..3034698, 3034708..3034710,3034825..3034827,3034897..3034905)) /locus_tag="B565_2696" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99747" misc_feature complement(3034516..3034518) /locus_tag="B565_2696" /note="catalytic residue [active]" /db_xref="CDD:99747" gene complement(3035235..3036323) /locus_tag="B565_2697" /db_xref="GeneID:10488614" CDS complement(3035235..3036323) /locus_tag="B565_2697" /codon_start=1 /transl_table=11 /product="biotin synthetase" /protein_id="YP_004393349.1" /db_xref="GI:330830397" /db_xref="GeneID:10488614" /translation="MNALTAGGHALRHDWTLAEVQALFALPFNDLLFQAQTVHRAYFD PNEVQVSTLLSIKTGACPEDCKYCPQSARYHTGLEAERLMEVEKVLERAREAKANGSS RFCMGAAWRNPKEKDMPYIIRMIEEVRGLGMETCMTLGMLTADQAARLGAAGLDYYNH NLDTSPEFYGEIISTRTYQDRLDTLEHVRGAGMKVCSGGIVGMGEQAKDRAGLLMALA NLPRHPESVPINMLVKVKGTPLENEENLDPFEFIRTIAVARIMMPASHVRLSAGREKM NEQMQAMCFMAGANSIFYGCKLLTTPNPDENSDMQLFKRLGIRPAQRAQKPDQVQEEE LLAEVSRQSEPAEMFYDATRPRAETARS" misc_feature complement(3035262..3036296) /locus_tag="B565_2697" /note="biotin synthase; Provisional; Region: PRK15108" /db_xref="CDD:185063" misc_feature complement(3035553..3036152) /locus_tag="B565_2697" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(3035628..3035633,3035724..3035726, 3035841..3035843,3035910..3035912,3035919..3035924, 3035994..3035999,3036003..3036005,3036117..3036125, 3036129..3036131,3036135..3036137,3036141..3036143)) /locus_tag="B565_2697" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" misc_feature complement(3035364..3035642) /locus_tag="B565_2697" /note="Biotin and Thiamin Synthesis associated domain; Region: BATS; cl06149" /db_xref="CDD:157061" gene 3036517..3037791 /locus_tag="B565_2698" /db_xref="GeneID:10488615" CDS 3036517..3037791 /locus_tag="B565_2698" /codon_start=1 /transl_table=11 /product="adenosylmethionine--8-amino-7-oxononanoate transaminase" /protein_id="YP_004393350.1" /db_xref="GI:330830398" /db_xref="GeneID:10488615" /translation="MTNQEFDLHHIWHPYTSLTHPLPCYEVASAKGVKITLSDGRELV DGMSSWWACVHGYQVPELDAATTAQLGKMSHVMFGGLTHAPAVELCRKLVEITPKGLD RVFLADSGSVAVEVALKMAQQYWHARGTPRAKFVALRSGYHGDTFGAMSVCDPDGGMH ELYKGFLPEHYFVDAPSCRFHAEWDEQCVVELATLMADHHEEIAAIVLEPIVQGAGGM RFYHPRYLQWVRALCDEFGVLLLADEIATGFGRTGQLFACDWAGISPDIMCLGKALTG GYLTLSATLTTEHVARTICDGKAGVFMHGPTFMGNPLACAVANASIDLLLASPWQERV RAIEHQLRTELVELTLHPAVADVRVLGAIGVVEMKERVDVARIQRKFVELGAWIRPFG KLVYLMPPFVITPEELRVLTGAIRQAITEGEF" misc_feature 3036526..3037773 /locus_tag="B565_2698" /note="Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase...; Region: OAT_like; cd00610" /db_xref="CDD:99735" misc_feature 3036529..3037788 /locus_tag="B565_2698" /note="adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated; Region: PRK07986" /db_xref="CDD:181189" misc_feature order(3036841..3036849,3036940..3036945,3036949..3036951, 3037141..3037143,3037243..3037245,3037249..3037254, 3037330..3037332) /locus_tag="B565_2698" /note="inhibitor-cofactor binding pocket; inhibition site" /db_xref="CDD:99735" misc_feature order(3036844..3036849,3036940..3036945,3037141..3037143, 3037243..3037245,3037252..3037254,3037330..3037332) /locus_tag="B565_2698" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 3037330..3037332 /locus_tag="B565_2698" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 3037968..3038780 /locus_tag="B565_2699" /db_xref="GeneID:10488616" CDS 3037968..3038780 /locus_tag="B565_2699" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004393351.1" /db_xref="GI:330830399" /db_xref="GeneID:10488616" /translation="MRLSIAAKINFFLLFIFSMVLVFSAAYQAVRERDLILTLIKEQS REQTEAYFDGLNMLMLTGKMDARDTLRGKFLDHAHVEDARIVRGDAVSKQFGPGRETE QVKDEFDELALAGKGSLEVVHNGMHSRLVVTRPLLAKKDFRGTDCTSCHLVPENTVLG AVRFDYSLDSLFTRVEQNILTSALILTGIFGMGLLLTLWVIRTWIVRPLNQLTRSMEE ATDLHDFGHRLEGDDGDEIGRVAVAYNQMLDSVERQLGKRTKASRQEPDQPR" misc_feature 3038580..3038726 /locus_tag="B565_2699" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cd06225" /db_xref="CDD:100122" misc_feature order(3038580..3038585,3038592..3038597,3038601..3038606, 3038613..3038618,3038622..3038624,3038673..3038678, 3038682..3038687,3038694..3038699,3038703..3038708, 3038715..3038720) /locus_tag="B565_2699" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100122" gene complement(3038790..3039134) /locus_tag="B565_2700" /db_xref="GeneID:10488617" CDS complement(3038790..3039134) /locus_tag="B565_2700" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393352.1" /db_xref="GI:330830400" /db_xref="GeneID:10488617" /translation="MKDRRHGPDWLTRVLQGLVMLCWGGFIVLLSLYHYARPEIAYGF LVYGGIEVRDYWDPSLTPWLVYGLWSCCALTLAVLLLERKRSRRQDDSRHVNLAILLL VLIASLLFYYVG" gene 3039335..3040735 /locus_tag="B565_2701" /db_xref="GeneID:10488618" CDS 3039335..3040735 /locus_tag="B565_2701" /codon_start=1 /transl_table=11 /product="asparaginyl-tRNA synthetase" /protein_id="YP_004393353.1" /db_xref="GI:330830401" /db_xref="GeneID:10488618" /translation="MTHASVVDVLAGKYPVGTTQTVKGWIRTRRDSKAGISFLAISDG SCFHPVQAVVPNTLANYENEVLRLTTACSVEVTGVVAASQGSGQAFELQATEVKVVGW VEDPDTYPMAAKRHSIEYLREQAHLRPRTNIVGAVTRVRHCLAQAIHRFFHEEGFLWV ATPLITASDTEGAGEMFRVSTLDMENLPRTDAGKVDYNEDFFGKEAFLTVSGQLNAET YACALSKVYTFGPTFRAENSNTSRHLAEFWMVEPEVAFNDLEDNAALAEAMLKYVFNA VLTERRDDLEFFAQHVDKDAIGRLERFVSSDFAQIDYTDAIEVLQNCGKKFEFPVSWG IDLSSEHERYLAEEHFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIG GSQREERLDVLDARLAEMGLNKEDYWWYRDLRRFGTVPHSGFGLGFERLVVYVTGMGN VRDVIPFPRTPRTAEF" misc_feature 3039335..3040732 /locus_tag="B565_2701" /note="asparaginyl-tRNA synthetase; Validated; Region: asnC; PRK03932" /db_xref="CDD:179678" misc_feature 3039395..3039640 /locus_tag="B565_2701" /note="EcAsnRS_like_N: N-terminal, anticodon recognition domain of the type found in Escherichia coli asparaginyl-tRNA synthetase (AsnRS) and, in Arabidopsis thaliana and Saccharomyces cerevisiae mitochondrial (mt) AsnRS. This domain is a beta-barrel domain (...; Region: EcAsnRS_like_N; cd04318" /db_xref="CDD:58588" misc_feature order(3039407..3039409,3039464..3039466,3039551..3039553, 3039635..3039637) /locus_tag="B565_2701" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:58588" misc_feature order(3039416..3039418,3039422..3039427,3039446..3039448, 3039485..3039487,3039491..3039493,3039539..3039541, 3039581..3039583,3039605..3039607) /locus_tag="B565_2701" /note="putative anticodon binding site; other site" /db_xref="CDD:58588" misc_feature 3039677..3040720 /locus_tag="B565_2701" /note="Asx tRNA synthetase (AspRS/AsnRS) class II core domain. Assignment to class II aminoacyl-tRNA synthetases (aaRS) based upon its structure and the presence of three characteristic sequence motifs in the core domain. This family includes AsnRS as well...; Region: AsxRS_core; cd00776" /db_xref="CDD:29821" misc_feature order(3039704..3039706,3039710..3039712,3039722..3039724, 3039737..3039739,3039755..3039760,3039767..3039769, 3039779..3039781,3039800..3039802,3039809..3039811, 3039815..3039817,3039821..3039829,3039833..3039835, 3039866..3039871,3039935..3039943,3039977..3039979, 3039986..3039988,3039995..3040006,3040067..3040072, 3040097..3040102,3040115..3040117,3040598..3040600, 3040607..3040618,3040709..3040717) /locus_tag="B565_2701" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:29821" misc_feature 3039821..3039835 /locus_tag="B565_2701" /note="motif 1; other site" /db_xref="CDD:29821" misc_feature 3040031..3040042 /locus_tag="B565_2701" /note="motif 2; other site" /db_xref="CDD:29821" misc_feature order(3040034..3040036,3040040..3040042,3040058..3040063, 3040499..3040501,3040508..3040510,3040643..3040645, 3040652..3040654) /locus_tag="B565_2701" /note="active site" /db_xref="CDD:29821" misc_feature 3040643..3040654 /locus_tag="B565_2701" /note="motif 3; other site" /db_xref="CDD:29821" gene 3040846..3041601 /locus_tag="B565_2702" /db_xref="GeneID:10488619" CDS 3040846..3041601 /locus_tag="B565_2702" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase" /protein_id="YP_004393354.1" /db_xref="GI:330830402" /db_xref="GeneID:10488619" /translation="MGYRLLLSLLLSCMPVQLWAEPVRLTTLEWPPYTSQSLPDGGLT GHIVKRAFAEAGLEVTFDFYPWQRAVRLAADPTQPYSGYFPEYLSDTLPTLWRSSPSV GDSVLGMAQRSGPPIPWQQLTDLAPYRIGVVEAYVNTQEFDALMASKRLNTAAVDADL LNLRKLQRDRLDLAVIDRDVFHWLINHDRKLSSAGLQFHPKILEHKSLHIMFRPDQQA LQQRVAQAIARLDIAKLSEDYQRRYLQQAPAAK" misc_feature 3040921..3041562 /locus_tag="B565_2702" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" gene 3041976..3043319 /locus_tag="B565_2703" /db_xref="GeneID:10488620" CDS 3041976..3043319 /locus_tag="B565_2703" /codon_start=1 /transl_table=11 /product="anaerobic C4-dicarboxylate membrane transporter" /protein_id="YP_004393355.1" /db_xref="GI:330830403" /db_xref="GeneID:10488620" /translation="MILMEFLVVLGCLLLGTRFGGMGLGLISGIGLFLLTFVFGLVPG EPPVQVMLTILAVIGCAATLQTAGGLNLMMQVAERLLRRHPQYITILAPLTTWTLTFL CGTGHVVYTMFPIIADIALQKNIRPERPMAVASVASQMAICASPVSVAVVSMVSILAA GHGIGQAYGLLDILMIAIPSSLTGVIVAALWSLRRGKDLDKDEEFQAKIKDPEQRAFI YGGGETLLNTKFPKEAYWSTWIFFAAIAAVVLLGANEGLRPVFTIKDKTGPLSMNLVI QMMMLIAGAIILMRCKVKPGEIANGAVFKAGMVAIFSVFGVAWMSETFFQAHMPLLKE TLAHVVQAQPWTYALVLFLISKLVNSQAAALTAIAPMGLALGVEPKLLIAFLPASYGY FVLPTYPSDLACIGFDRSGTTRIGKFIINHSFIIPGLIGVVTSCSLGFILTSILL" misc_feature 3041976..3043316 /locus_tag="B565_2703" /note="Anaerobic c4-dicarboxylate membrane transporter; Region: DcuA_DcuB; cl01040" /db_xref="CDD:186305" gene 3043494..3044150 /locus_tag="B565_2704" /db_xref="GeneID:10488621" CDS 3043494..3044150 /locus_tag="B565_2704" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393356.1" /db_xref="GI:330830404" /db_xref="GeneID:10488621" /translation="MSRVILLWSGGKDAMLALCHARQAGHQVVALATFAPPEPRFLAH PLPLVRRQAEALGLPHLLVTIEAPFGLGYERALARLKEEWQLDGVVTGDIDNVGGAPN WIRERCRPLGITVHTPLWQLSREALLADLLARGIVAHLSCVDTRVLAPEWTGRTLDAA TLAELQQLAEREGFDASGEQGEYHTMVTDGPGFAAPLRLDGWLVARQDHLAYLAEPQG " misc_feature 3043500..3044072 /locus_tag="B565_2704" /note="This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This...; Region: Alpha_ANH_like_IV; cd01994" /db_xref="CDD:30181" misc_feature order(3043512..3043520,3043524..3043535,3043587..3043589, 3043593..3043595) /locus_tag="B565_2704" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30181" gene complement(3044288..3045427) /locus_tag="B565_2705" /db_xref="GeneID:10488622" CDS complement(3044288..3045427) /locus_tag="B565_2705" /codon_start=1 /transl_table=11 /product="carboxypeptidase G2" /protein_id="YP_004393357.1" /db_xref="GI:330830405" /db_xref="GeneID:10488622" /translation="MTVVKSPFSLDSYLADLAPLINLDCGTRTPAGVAKVADIMTEKY EAIGWQVTRHQFAAECGPCLEATNAPGADHYDVMLCGHMDTVFPEGTAAKRPLKIEGN QAFGPGVSDMKSGLLSIWYALKEMDPALLAKLKVLVCYNCDEEIGSPWSKDWLVEKAK QSGCVLVAEAARPNGDLISARKGNAKYRITFHGKASHAGSALTEGISAITELAHWVLA INEQVNMTTGTTMNVGVVQGGTGVNVVPDFAEAIVDLRFWSNEEAAAVHDRLTFMANN PFLAGCRVEVDRQTFKPAMRPSGDTEALMALVEAAAKEEGIPFNWLEAGGGSDANFTA AAGVPSLDGFGPMGGGFHSEAEFLLLESIEPRIRLLQRVLGKLVK" misc_feature complement(3044306..3045391) /locus_tag="B565_2705" /note="M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme; Region: M20_CPDG2; cd03885" /db_xref="CDD:193506" misc_feature complement(3044297..3045364) /locus_tag="B565_2705" /note="hypothetical protein; Provisional; Region: PRK07338" /db_xref="CDD:180938" misc_feature complement(order(3044372..3044374,3044921..3044923, 3044993..3044998,3045095..3045097,3045182..3045184)) /locus_tag="B565_2705" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193506" misc_feature complement(order(3044660..3044662,3044666..3044668, 3044690..3044692,3044696..3044704,3044711..3044734, 3044777..3044782,3044786..3044791,3044801..3044803, 3044807..3044809,3044828..3044836)) /locus_tag="B565_2705" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:193506" gene complement(3045562..3046938) /locus_tag="B565_2706" /db_xref="GeneID:10488623" CDS complement(3045562..3046938) /locus_tag="B565_2706" /codon_start=1 /transl_table=11 /product="transporter C4-dicarboxylate uptake C (DcuC) family" /protein_id="YP_004393358.1" /db_xref="GI:330830406" /db_xref="GeneID:10488623" /translation="MELLFVLLVLVAVVYGIIKDYNPQAVLALAGMAIFAVAYWLGLH PILPADKSTGFALFDLFEVFKGIFSYRAAGLGLTIMAVAGFATYMSHIGASQALVRVA VKPVAGIQSSYLMLSICYLVAVFVSLFVTSATGLGLLLMVTMYPVMRNLGISPASACG VIATSQAFEIGPTQTNAIFSAGQSGMDPTSYFVDYQIWLVAPMLLVTMVLHFFWQRHC DRKDGWDPALHRGDHAELDEQGTESVQAPTWYALLPIIPFVLMMTFSKLLVSDIKMSV EVAMLLSVFIGMLCELLRSRSVRTAFAGLSSFLDGMGKVFGPVVALIVCAELFAESLK AIGAIDTLLHSASNAGIGSGLMTLVMVALIMVAAVIMGSGNAAFLSFSTLAPAVAAKF GVPAVTMLLPMQLASSIGRTVSPIAAVLIACAGIAKVSPFTVVKRTSVPMAGALVTAL TLNYLLFM" misc_feature complement(3045568..3046896) /locus_tag="B565_2706" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature complement(3045592..3046896) /locus_tag="B565_2706" /note="C4-dicarboxylate anaerobic carrier; Region: DcuC; pfam03606" /db_xref="CDD:112424" gene 3047224..3047538 /locus_tag="B565_2707" /db_xref="GeneID:10488624" CDS 3047224..3047538 /locus_tag="B565_2707" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393359.1" /db_xref="GI:330830407" /db_xref="GeneID:10488624" /translation="MTSQATAGASTCDYKLWDILVESAKERTTIRYSKLAKQAGLEQC QDELRTLLQRIRMYCTENNLPILSAIVVDDVGKYTGLSSSLPDAPWERARVFDHEWTT LH" gene 3047857..3048207 /locus_tag="B565_2708" /db_xref="GeneID:10488625" CDS 3047857..3048207 /locus_tag="B565_2708" /codon_start=1 /transl_table=11 /product="arsenate reductase" /protein_id="YP_004393360.1" /db_xref="GI:330830408" /db_xref="GeneID:10488625" /translation="MAITLYGIKNCDTIKKARKWLDEAGIDYRFHDHRADGLNPDDLD SWLAKLGWEALLNSRGTTFRALPDEAKQGLDTAKARALLLEHPAMIKRPLLDRDGELT LGFKADHYQSLFSR" misc_feature 3047863..3048177 /locus_tag="B565_2708" /note="Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine...; Region: ArsC_Yffb; cd03035" /db_xref="CDD:48584" misc_feature order(3047887..3047889,3048025..3048027,3048130..3048132, 3048169..3048171) /locus_tag="B565_2708" /note="putative catalytic residues [active]" /db_xref="CDD:48584" gene 3048227..3049354 /locus_tag="B565_2709" /db_xref="GeneID:10488626" CDS 3048227..3049354 /locus_tag="B565_2709" /codon_start=1 /transl_table=11 /product="succinyl-diaminopimelate desuccinylase 1" /protein_id="YP_004393361.1" /db_xref="GI:330830409" /db_xref="GeneID:10488626" /translation="MSDVIALAKDLIRRPSVTPLDEGCQTLMAERLARIGFVIEPMVF EDTTNLWARRGSEGPLFCFAGHTDVVPAGPLDKWHTPPFEPTIKDGVLYGRGAADMKG SLASMVVAVERFVAEHPDHTGSIAFLITSDEEGPFINGTTRVIDTLEARNEKIRWCIV GEPSSTAVVGDVVKNGRRGSITGDLLVRGVQGHVAYPHLADNPIHKAAPALAELAATV WDEGNAYFPPTSFQIANIQAGTGASNVIPGELQVQFNFRFSTKLTDMDIRERVEALLD RHGLDYQLSWTLSGQPFLTDTGALLDAAVAAIEAVNGQRPALLTTGGTSDGRFIAPTG AEVIELGPVNATIHKVNECVKADDLDLLADMYQGVLERLLA" misc_feature 3048227..3049351 /locus_tag="B565_2709" /note="succinyl-diaminopimelate desuccinylase; Reviewed; Region: PRK13009" /db_xref="CDD:183838" misc_feature 3048239..3049336 /locus_tag="B565_2709" /note="M20 Peptidase proteobacterial DapE encoded N-succinyl-L,L-diaminopimelic acid desuccinylase; Region: M20_DapE_proteobac; cd03891" /db_xref="CDD:193511" misc_feature order(3048422..3048424,3048521..3048523,3048623..3048628, 3048710..3048712,3049268..3049270) /locus_tag="B565_2709" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193511" misc_feature order(3048770..3048772,3048803..3048814,3048830..3048832, 3048836..3048841,3048848..3048853,3048857..3048862, 3048869..3048871,3048914..3048916,3048920..3048943, 3048962..3048967,3048989..3048991,3048995..3048997, 3049190..3049192) /locus_tag="B565_2709" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:193511" gene 3049351..3050040 /locus_tag="B565_2710" /db_xref="GeneID:10488627" CDS 3049351..3050040 /locus_tag="B565_2710" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase family protein" /protein_id="YP_004393362.1" /db_xref="GI:330830410" /db_xref="GeneID:10488627" /translation="MTQEQLLGLDESHLILVGRGPHRLTAATAAAFNDMQVAAAYEGF NLQAASSWRSFERQLAIWNGKWRGERPLLDANSQPIDALQLGDEERLHAILRWSALPG TSRHHWGTDLDIYDPDCLPADTKLALEPWEYEAGGWFADLSEWLSDHMSDFGFFLPYA KPLGAESGVAYEPWHISFSLESDEQRLDPAALALCLQQVDIEGKSTILANLDEILARY VTTCPDERKIP" misc_feature 3049414..3049884 /locus_tag="B565_2710" /note="D-alanyl-D-alanine carboxypeptidase; Region: VanY; cl00813" /db_xref="CDD:186202" gene 3050463..3052190 /locus_tag="B565_2711" /db_xref="GeneID:10488628" CDS 3050463..3052190 /locus_tag="B565_2711" /codon_start=1 /transl_table=11 /product="cell volume regulation protein A" /protein_id="YP_004393363.1" /db_xref="GI:330830411" /db_xref="GeneID:10488628" /translation="MDAATINSFFFVAALLVGASVLLSALSSRLGIPILVIFLAVGML AGEDGPGGIHFADYSIAYLVGNLALAIILLDGGMRTRVSSFRVALWPALSLATVGVAI TTGLTGLAAAWLFDLNLMQGMLIGAIVGSTDAAAVFSLLGGRSLNERVSATLEIESGS NDPMAVFLTVTLIEVLATAQQGLDGGFLLLQLVKQFGLGAGIGLGGGWLLWRLINTAR LAPGLYPLLTVSGGLLIFALTTAVGGSGILAIYLTGLLLGNLALRSRSTTLSVLDGLT WLSQIGMFLVLGLLASPHKLLPIALPALALAMWMILFARPVSVWIGLLPFKNFAPRER WFISWVGLRGAVPIILAVFPMMAGLPNAQLYFNVAFFVVLVSLILQGSSLPLASKLAR VEVPAPPSPINRSGLEIDLDSQWETFVYQLGEEKWCIGSPLRDLQMPAGTRICALFRG RELLHPSGSTCLQADDILCVIGHERDLPALGQLFSQAPEQDLGPRFFGDFLLEAAARL VDLAPLYGLDVSEVADQTLGDFIANQLGDNLVVGDNIEWQGLIWTVAEMDESVPGKVG VRFQEEDPV" misc_feature 3050547..3052169 /locus_tag="B565_2711" /note="potassium/proton antiporter; Reviewed; Region: PRK05326" /db_xref="CDD:180017" misc_feature 3051714..3051914 /locus_tag="B565_2711" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature 3051945..3052166 /locus_tag="B565_2711" /note="Transporter associated domain; Region: CorC_HlyC; pfam03471" /db_xref="CDD:190650" gene 3052234..3053337 /locus_tag="B565_2712" /db_xref="GeneID:10488629" CDS 3052234..3053337 /locus_tag="B565_2712" /codon_start=1 /transl_table=11 /product="Hyaluronidase" /protein_id="YP_004393364.1" /db_xref="GI:330830412" /db_xref="GeneID:10488629" /translation="MPYQSLLSGPLPPASNLGVIEGFFGKGWSWQARARYAQWLPRHG YGFYIYAPKEDGYLRKHWALPWPEQQLADLAELARQCRANGLAFGVGLSPMGAHHDYK RQRPALLEKVRLIDEMLQPDILAVLFDDMKGDTPDLARHQLTIAHDIAAHSKASRLIF CPSYYSTDPVLEKVFGAMPPRYLEELGEQLDRRFEIFWTGPKVCSSEYPASHLKQVTE LLGRKPFLWDNYPVNDGSKASSYLHLRAFENRPAELAELVAGHAVNPMKQAALSALPL ATLPMSYRLGKQYDPDKALHAALNATCGPQISAMIEADLPLFQDLGLAQLTPEQIAAL KARYLPFRDQSCVDEIVRWLDGEYVFDPDCLTD" misc_feature 3052285..3053037 /locus_tag="B565_2712" /note="beta-N-acetylglucosaminidase; Region: NAGidase; pfam07555" /db_xref="CDD:148908" gene 3053370..3054578 /locus_tag="B565_2713" /db_xref="GeneID:10488630" CDS 3053370..3054578 /locus_tag="B565_2713" /codon_start=1 /transl_table=11 /product="Na+/H+ antiporter" /protein_id="YP_004393365.1" /db_xref="GI:330830413" /db_xref="GeneID:10488630" /translation="MDAHLLYQNLAVIAAFLLIYSLIAGRFESKLVNGPLLFLLTGWL LGPGGLELLSLSIDSAGIKLLAELTLVIVLFNDAANTNWQVLLANRQLPIRLLLIGLP LTLLCGALFGHWIFPDLPLLEMAILSTILAPTDAALGKAVVSNPAVPAPVREGLNQES GLNDGICVPVLLLLLALIAPTEQHAGTATLAITLMLEEIGIGLLVAFVLTSLTIRLLK ISYLNGWQLPLWRQLTMPGLALLCFALAQTLGGSGFIAAFVGGLFIGHRLGEHKHAYM DSCEGYGDLLSVVIWMVFGATLMPILPELLHWQYWLYAIASLTLLRMVPVWLSLIGTG LKPELKLFIGWFGPRGLASIVFAVMVLQNEPSLIGQRPIIATVLCTIILSVILHGLTA NPWVERFKPR" misc_feature 3053559..3054569 /locus_tag="B565_2713" /note="NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]; Region: NhaP; COG0025" /db_xref="CDD:30375" gene complement(3054652..3055284) /locus_tag="B565_2714" /db_xref="GeneID:10488631" CDS complement(3054652..3055284) /locus_tag="B565_2714" /codon_start=1 /transl_table=11 /product="LysE family transporter" /protein_id="YP_004393366.1" /db_xref="GI:330830414" /db_xref="GeneID:10488631" /translation="MSSWIDPAILALFIPTFFFVSVTPGMCMTLSMTLGMSLGVRRTL HMMWGELIGVGLVSVLSVIGVAAIMLNYPGIFAAFKYVGGAYLVWLGIQMWQAKGKMA IPADLSAGQQTSAMGLALQGFVTAIANPKGWAFMISLLPPFISADKPMAPQISALVAL ILVIEFSCLLLYASGGRTLRHFLAKSGNVTLMNRIAGTLMLGVGVWLALG" misc_feature complement(3054655..3055272) /locus_tag="B565_2714" /note="LysE type translocator; Region: LysE; cl00565" /db_xref="CDD:186083" gene 3055562..3057139 /locus_tag="B565_2715" /db_xref="GeneID:10488632" CDS 3055562..3057139 /locus_tag="B565_2715" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="YP_004393367.1" /db_xref="GI:330830415" /db_xref="GeneID:10488632" /translation="MLLASLLMMVMIAISKQGLDEAINDIDETTQSVVQNKDDIAKLI HATYRLRTSAIYGLYDAKLFAALPANLNSAEQEINAILSRLVLPGAEQDNRQVAAALQ AYLSHTRSNMLPLLTQQHQGGGDPVAYEAARLHFRELGEQLIKQIDSMSAHINQLIQQ ELAEEQAHYDATLLRTLLLTAGTLLAALICGWVLSGRIVSPISQLQEVMHAVAQGRFN VRAKAEGNNELTRLAKDINLTLGQLGSTIENLTGISNSVASAATELAAVMTQSEANAK QQHSEIEQVASAVTELSSTADNVNHNAAIADELARDANGRVEQGLALFTESIAANSRM AGSLEDAAAIVAQLKSQSEQIGKVIEVIQGISEQTNLLALNAAIEAARAGETGRGFAV VADEVRMLAARTQDSTKEIQAIIERLQSQSQSANNGVQETLEILSHNQRLSAQVQDLL SGITGAVRQINDANAQVATAAEEQSCVTADINRNITNIHEIVSQSSAAISQSASASNE LSLLAEQQRKQLAQFQL" misc_feature 3056126..3056290 /locus_tag="B565_2715" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 3056555..3057037 /locus_tag="B565_2715" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 3057315..3057845 /locus_tag="B565_2716" /db_xref="GeneID:10488633" CDS 3057315..3057845 /locus_tag="B565_2716" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393368.1" /db_xref="GI:330830416" /db_xref="GeneID:10488633" /translation="MSLRFKKPAFIALGLIALISAAWLDYYLPEHTIATITGVEVKRT DKDGPISQKNPADGPTTDVYYIYTERPGEKIRVFRNEDTEWGWPFYFKFNAADVQAKA KSMEFEKRLAIITSYGWRVNMFSMFPNVTKIESTEPDASTWSFFRWFWFGLWALVMGK AAIATWRYFDRLEDEL" misc_feature 3057381..3057821 /locus_tag="B565_2716" /note="Protein of unknown function (DUF1523); Region: DUF1523; pfam07509" /db_xref="CDD:116129" gene 3057842..3058138 /locus_tag="B565_2717" /db_xref="GeneID:10488634" CDS 3057842..3058138 /locus_tag="B565_2717" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393369.1" /db_xref="GI:330830417" /db_xref="GeneID:10488634" /translation="MSEPSKTRTSFYRRLYVAWLISQGTDTVPAIMEATGMPRRTAQD TLTALAELDISCAFEQTEGARHLQGHYRISDWGPINPAWIKAQLPLIKETLSYP" misc_feature 3057923..3058126 /locus_tag="B565_2717" /note="Uncharacterized protein conserved in bacteria (DUF2131); Region: DUF2131; cl11547" /db_xref="CDD:159532" gene complement(3058325..3058777) /locus_tag="B565_2718" /db_xref="GeneID:10488635" CDS complement(3058325..3058777) /locus_tag="B565_2718" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393370.1" /db_xref="GI:330830418" /db_xref="GeneID:10488635" /translation="MVLLAGLQLTGCATPFERMWQGLATCEFTDLYVDETGRPANLQL ANYTPYKVNDGFAWYKVHEELHGLPVVGFIVPASSFEVHALFVDTPIANARRLTHNAY GSEFGDEQKHDEGLAPLLLRDPNNPKRSIIDCTRGESDGELEDSAMPE" gene complement(3058826..3059761) /locus_tag="B565_2719" /db_xref="GeneID:10488636" CDS complement(3058826..3059761) /locus_tag="B565_2719" /codon_start=1 /transl_table=11 /product="Inosine-uridine preferring nucleoside hydrolase superfamily protein" /protein_id="YP_004393371.1" /db_xref="GI:330830419" /db_xref="GeneID:10488636" /translation="MALPVILDCDPGHDDAIALILALASPELKVLAVTTSAGNQTPDK TLNNALRILTLLGRDDIPVAAGAPKPLARELIIADNVHGESGLDGPKLPDPAFAPQAM TGIELMARCLRESPEPVTLVPTGPLTNIALLLAAHPELKPKIARIVLMGGTAGAGNWT PAAEFNIYVDPEAADMVFKSGIPITMCGLDVTHEAQVMDEDIERVRTITNPVAQCVAG LLDFFMIYHRDPKWGFAGAPLHDPCTIAWLLAPELFHGVECRVDIETSGEHTVGMTVV DRYGLTGKPANALVLLGLDRPGFIDLLVTRLRAFD" misc_feature complement(3058841..3059752) /locus_tag="B565_2719" /note="nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the...; Region: nuc_hydro_IU_UC_XIUA; cd02651" /db_xref="CDD:29579" misc_feature complement(order(3059039..3059041,3059264..3059266, 3059270..3059272,3059288..3059290,3059390..3059392, 3059519..3059521,3059645..3059647,3059717..3059722, 3059732..3059734)) /locus_tag="B565_2719" /note="active site" /db_xref="CDD:29579" misc_feature complement(order(3058952..3058954,3058961..3058966, 3058970..3058972,3059234..3059236,3059357..3059359, 3059549..3059551)) /locus_tag="B565_2719" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:29579" gene 3060016..3060711 /locus_tag="B565_2720" /db_xref="GeneID:10488637" CDS 3060016..3060711 /locus_tag="B565_2720" /codon_start=1 /transl_table=11 /product="Pseudouridine synthase" /protein_id="YP_004393372.1" /db_xref="GI:330830420" /db_xref="GeneID:10488637" /translation="MSVIVDTFIAPPCSAAIETLFEDEHLLLINKPSGLLSLSGKNPQ NLDSVHYRLVQDYPGCTLVHRLDFGTSGIMVVARNKAINALLCQQFSQRAVSKAYSAL LCGHLIDDEGVIDAPIAKDPALFPLMKICAASGKPARSRYRVIERLAQQIQGQTVPLT RVRLVPETGRTHQLRLHSQLLGYPILGCDLYGGLLPPGCEQAPRLMLHASKLDFTHPV SGEPMQVRCAAPF" misc_feature 3060091..3060657 /locus_tag="B565_2720" /note="PseudoU_synth_RsuA/RluD: Pseudouridine synthase, RsuA/RluD family. This group is comprised of eukaryotic, bacterial and archeal proteins similar to eight site specific Escherichia coli pseudouridine synthases: RsuA, RluA, RluB, RluC, RluD, RluE, RluF...; Region: PseudoU_synth_RluCD_like; cd02869" /db_xref="CDD:30029" misc_feature order(3060205..3060216,3060538..3060540) /locus_tag="B565_2720" /note="active site" /db_xref="CDD:30029" gene complement(3060852..3061607) /locus_tag="B565_2721" /db_xref="GeneID:10488638" CDS complement(3060852..3061607) /locus_tag="B565_2721" /codon_start=1 /transl_table=11 /product="Uridine phosphorylase" /protein_id="YP_004393373.1" /db_xref="GI:330830421" /db_xref="GeneID:10488638" /translation="MSDVFHLGLKKADLQGATLAIVPGDPERVKRIAELLDNPVHLAS HREFTTWRGEMDGKAVIICSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHLNV GDVIVTTGSVRLDGASLHFAPMEFPAVADFDCTTALVNTAKEMGSKLHIGVTASSDTF YPGQERYDTVSGRVVSRFQGSMKEWQAMGVLNYEMESATLLTMCSSQGLRAGMVAGVI VNRTQQEIPNAETMAKTESDAIKIVLGAARKLI" misc_feature complement(3060855..3061607) /locus_tag="B565_2721" /note="Phosphorylase superfamily; Region: PNP_UDP_1; cl00303" /db_xref="CDD:193757" misc_feature complement(3060855..3061607) /locus_tag="B565_2721" /note="Uridine phosphorylase [Nucleotide transport and metabolism]; Region: Udp; COG2820" /db_xref="CDD:32648" gene 3061989..3063140 /locus_tag="B565_2722" /db_xref="GeneID:10488639" CDS 3061989..3063140 /locus_tag="B565_2722" /codon_start=1 /transl_table=11 /product="putative alcohol dehydrogenase with dehydroquinate synthase-like domain" /protein_id="YP_004393374.1" /db_xref="GI:330830422" /db_xref="GeneID:10488639" /translation="MATFKFYIPAINLMGAGCLQEAAADIKGYGYRKALIVTDKILNQ IGVVAKLTTLLAEHGIESAVFDETKPNPTTSNVEAGLAMIKANCCDCVISLGGGSPHD CAKGIALVAANGGSIKDYEGVDRSAKPQLPLIAINTTAGTASEMTRFCIITDEARHVK MAIIDKHVTPLMSVNDPELMLAKPAGLTAATGMDALTHAIEAYVSTIATPVTDASAVM AIELIAKHLRTAVHHGDDLHAREQMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYDLP HGVCNAVLLPHVQTFNAQVSAARLKDVARYMGVDVSAMSDEQGAAAAIAAIKQLALDV KIPAGLEQLGVKADDFDTLASNALKDACGFTNPKQASHEEIVAIFRAAM" misc_feature 3061995..3063137 /locus_tag="B565_2722" /note="Alcohol dehydrogenase, class IV [Energy production and conversion]; Region: EutG; COG1454" /db_xref="CDD:31643" misc_feature 3061998..3063128 /locus_tag="B565_2722" /note="Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria; Region: LPO; cd08176" /db_xref="CDD:173935" misc_feature order(3062016..3062030,3062499..3062501,3062628..3062630, 3062721..3062723) /locus_tag="B565_2722" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173935" misc_feature order(3062103..3062105,3062277..3062285,3062400..3062405, 3062412..3062414,3062439..3062441,3062466..3062468, 3062523..3062525,3062547..3062549,3062568..3062570, 3062580..3062582,3062775..3062777,3062817..3062819) /locus_tag="B565_2722" /note="active site" /db_xref="CDD:173935" misc_feature order(3062568..3062570,3062580..3062582,3062775..3062777, 3062817..3062819) /locus_tag="B565_2722" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173935" gene complement(3063190..3064572) /locus_tag="B565_2723" /db_xref="GeneID:10488640" CDS complement(3063190..3064572) /locus_tag="B565_2723" /codon_start=1 /transl_table=11 /product="FlpL" /protein_id="YP_004393375.1" /db_xref="GI:330830423" /db_xref="GeneID:10488640" /translation="MPLLSEQRGGLSPAFALMLVGVLALTGVAIELVRGYNGQSLLSA AADAVIYSAADSDTALQDAQALMQANLSGRNLQVATPRLSQGEQGAQVILQGKVPALM DLSAIDEGEEGMPIAAAARASSARSRIEVALVLDISDSMSGAPMKAIKQGLVEFGEVL FGRERRNQERVVSIIPATGLVNIGDHPELFHPESIEIPFGLRTLAEERGWLNLLSREV PGRQRKAFCARLPEHVDGIDRVAEVTPGWIRKLEQAPRDELRPHLFYSTKPPPIARYG DGTPLLAFAPKENPLDRYLENRRDKLGIFDDPDCGVSPIQAHLSTRADYRQALDTLYA AFNTNTAEGVMWGWRLLSPEWQGRWRQGAAALPRPYELQDNRKIMVLFSDGEHMTEAA LRDRKQLLLCREMKRKGIQIYTVAFEGDTRFVAQCASDRSLAFKATKSNIRTVLTRLA SSINDVVLTK" misc_feature complement(3063313..>3063615) /locus_tag="B565_2723" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cl00057" /db_xref="CDD:197401" gene complement(3064572..3065063) /locus_tag="B565_2724" /db_xref="GeneID:10488641" CDS complement(3064572..3065063) /locus_tag="B565_2724" /codon_start=1 /transl_table=11 /product="FlpK" /protein_id="YP_004393376.1" /db_xref="GI:330830424" /db_xref="GeneID:10488641" /translation="MSRTISRPAQNRGSISIEAMLFIPALLALLSFGNEALQLLRLEQ RLHNVAYNVTQIVTQQGVTQDAAAVSQLAFYQGFVQQQLAALHGGQAALTIEQYNSAS GELLPLLQGSGCVGQGNWPPLRVGTLMRVTLCYRPDLEGGGMFSRLWGDRALTTHFIQ EVH" gene complement(3065060..3065533) /locus_tag="B565_2725" /db_xref="GeneID:10488642" CDS complement(3065060..3065533) /locus_tag="B565_2725" /codon_start=1 /transl_table=11 /product="FlpJ" /protein_id="YP_004393377.1" /db_xref="GI:330830425" /db_xref="GeneID:10488642" /translation="MNHQRGVASIELVIILPLLLALLLLVVDVLRIQLQYSTLEYGLR AALRELQAESAAGRIPLAGAIRERLLKQGHGELAGVEVTVRHHVSLAAMLGQQEGGLD PGSDTRAPADPVLEVTARLRPRLLLTPSWLVADRQLGYQSTLLLLTDRLPAGGAG" gene complement(3065530..3066288) /locus_tag="B565_2726" /db_xref="GeneID:10488643" CDS complement(3065530..3066288) /locus_tag="B565_2726" /codon_start=1 /transl_table=11 /product="Flp pilus assembly protein TadD" /protein_id="YP_004393378.1" /db_xref="GI:330830426" /db_xref="GeneID:10488643" /translation="MKSSYYLIFISLLLLAGCSSHGDASAQSQSNGMAVAKAAFDSAQ YEKAERLYLALLSSDASLEEAQLMLARTRYQQDKKQAARDGLQQLLDRAGKQAPEAAN YLGKFLLDDGRTEEAATAYRQGLALPELTPLARARLSNGLGVASLRQGAFAKGRALFE AAVAAAPDEPDYRGNLALGWLMEGNRVAARQAFEPLLHYQSLPPQVEMNYALLLLAEG NEPQARLILSRFLSASQLEHDIRLLKAQLRGQSV" misc_feature complement(3065536..>3066033) /locus_tag="B565_2726" /note="Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion]; Region: TadD; COG5010" /db_xref="CDD:34615" gene complement(3066308..3067192) /locus_tag="B565_2727" /db_xref="GeneID:10488644" CDS complement(3066308..3067192) /locus_tag="B565_2727" /codon_start=1 /transl_table=11 /product="Flp pilus assembly protein TadC" /protein_id="YP_004393379.1" /db_xref="GI:330830427" /db_xref="GeneID:10488644" /translation="MAVTQLFALALLSLALAAVTGWYGYRQQQQWQQQCRRYATLAAA KVPGREWLAWCGRGYPVGGREQARLQQLLAQAGIFASQGFDRLRGAKLLGGLGLAIMV LTWRLLGAPADGFTLMWVLMAYVVGAGLPERWLQWRARKVKAAQQKVVPDAIDLLVIS VEAGLALDRALLRVGHYLEALEPGLARQFLRTHAEIQMRGDQASCLARLAWRTGLPEL DRLANTLQMAQQYGSPLAETMRTISQEARQMRRLALEEQAGSLPGKITLIQMALIMLP MLVLIIAPTLNLLINSLR" misc_feature complement(3066344..>3066853) /locus_tag="B565_2727" /note="Bacterial type II secretion system protein F domain; Region: GSPII_F; cl00906" /db_xref="CDD:154078" gene complement(3067196..3068080) /locus_tag="B565_2728" /db_xref="GeneID:10488645" CDS complement(3067196..3068080) /locus_tag="B565_2728" /codon_start=1 /transl_table=11 /product="Flp pilus assembly protein TadB" /protein_id="YP_004393380.1" /db_xref="GI:330830428" /db_xref="GeneID:10488645" /translation="MSVLLSVCLGWGAACLLLWQWQSRREAWLQQSQRYGGQPESREA ARPLPQWYQQMVTMVGQEQLTRWCWQGPAGAALACILLVANGMPLWLALLLAVGGALL LGLLLYQQLQQRALEQFRTGLPEVIDGMIRALRVGAPLADIFQQVARQQRGLMSRLFA QMHDELQVGQPVAQVMRQAANRVTVAEFQFLTIVLSLQQETGGRLSDVLAQLVETLRA RQTLAASIQTITAESRNSAKVLAALPVIILLVLFSTGREHFTYLMTTASGQWVMGYVS ISVAVGLWLIRRLTRLQG" misc_feature complement(3067208..>3067732) /locus_tag="B565_2728" /note="Bacterial type II secretion system protein F domain; Region: GSPII_F; cl00906" /db_xref="CDD:154078" gene complement(3068077..3069390) /locus_tag="B565_2729" /db_xref="GeneID:10488646" CDS complement(3068077..3069390) /locus_tag="B565_2729" /codon_start=1 /transl_table=11 /product="Flp pilus assembly protein, ATPase CpaF" /protein_id="YP_004393381.1" /db_xref="GI:330830429" /db_xref="GeneID:10488646" /translation="MFGQASNRQPPVQGALLTMSEAAREAFYELVEPSVAATLPRDAL LERVANALEQLSSRRMLPYNRQELLLLGRQLVDEMVGVGPLQPLLDDPEVSDILVNGP DKVYVERHGKLVLSGVRFRDRQHVFNVAQRIVNAVGRRVDESTPMVDARLADGSRVNV IAPPIALCGTSISIRKFPSSRLTLAHLVEKGALSDAMARFLGLAARSRFNVLISGGTG SGKTTLLNALSKHINDDERIITIEDAAELSLEQPHWVPLETRNESAEGKGEVSVRALV RNALRMRPDRIILGEVRGAEAFDMLQAMNTGHDGSLCTLHANTPEDALLRLTNMLQMG AERLSEQIIQAQIASAVDLVVQLERMRDGQRRITAISEITALEGGQIRMQPVFRFVLE SELHGKLQGRFMAHPLSAGVQEKARQAGLLAELQACMDEDGEEDA" misc_feature complement(3068209..3069249) /locus_tag="B565_2729" /note="Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion]; Region: CpaF; COG4962" /db_xref="CDD:34569" misc_feature complement(3068287..3068841) /locus_tag="B565_2729" /note="Type IV secretory pathway component VirB11, and related ATPases. The homohexamer, VirB11 is one of eleven Vir proteins, which are required for T-pilus biogenesis and virulence in the transfer of T-DNA from the Ti (tumor-inducing) plasmid of bacterial...; Region: VirB11-like_ATPase; cd01130" /db_xref="CDD:29996" misc_feature complement(order(3068305..3068307,3068722..3068739, 3068830..3068832)) /locus_tag="B565_2729" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29996" misc_feature complement(order(3068725..3068733,3068743..3068748)) /locus_tag="B565_2729" /note="Walker A motif; other site" /db_xref="CDD:29996" misc_feature complement(order(3068314..3068316,3068416..3068418, 3068425..3068427,3068437..3068445,3068473..3068478, 3068485..3068487,3068497..3068499,3068536..3068538, 3068542..3068550,3068617..3068622,3068626..3068637, 3068656..3068658,3068680..3068682,3068737..3068742)) /locus_tag="B565_2729" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:29996" misc_feature complement(3068518..3068535) /locus_tag="B565_2729" /note="Walker B motif; other site" /db_xref="CDD:29996" gene complement(3069390..3070523) /locus_tag="B565_2730" /db_xref="GeneID:10488647" CDS complement(3069390..3070523) /locus_tag="B565_2730" /codon_start=1 /transl_table=11 /product="Flp pilus assembly protein FlpE" /protein_id="YP_004393382.1" /db_xref="GI:330830430" /db_xref="GeneID:10488647" /translation="MSEQAKRLVAVTRQPALSAGVERVMAGLSDVEHLQLTGSLAEAR AHCLAHGAPDILLVEVENQQTLAADLAALAECCPPQMRLVLLGERGDVALFRWLISVG VDDYYPAPLDPDALRAGLLRLLGVPLVTSLRKGRVICVVGAAGGVGTSTVCANLALEL AEQHHRQVALLDLNLYHSRHPILLGSDYAPPGEQWWQATDRLDGTLLAHTAHQLGPRL FLFYDEGAELVLGAEQLVAAVNVMAEHYSTLIIDVPDLRSHGLRALLQEADVVIWLHD FSLGALRLLGNLPKGGQAQRHLLVGNHCRGKEARVPAAELDRVCGQPHAAVLPYDHGA FVRAERAGMALIKQKSKLARAIKWLAAELVGTQPAGRRRGGLR" misc_feature complement(3069393..>3070061) /locus_tag="B565_2730" /note="Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion]; Region: CpaE; COG4963" /db_xref="CDD:34570" gene complement(3070527..3071075) /locus_tag="B565_2731" /db_xref="GeneID:10488648" CDS complement(3070527..3071075) /locus_tag="B565_2731" /codon_start=1 /transl_table=11 /product="FlpD" /protein_id="YP_004393383.1" /db_xref="GI:330830431" /db_xref="GeneID:10488648" /translation="MLKETLLLVMTLPLLACTTPPPAAPLKDQLQFRVAPSQLQQQLQ WQLAPLANRLEAGTVTLQIRGPQPASNAPTPEALRQQLAQWLALDTRLIFTPTGQGDY QVQLDVTLQPDSCRYARGGASAPASACLVLRNQYRAQSHGEHWARGARYDGSGSALDA GAVQRLYQGKAKSAKKQQTTGE" gene complement(3071087..3072484) /locus_tag="B565_2732" /db_xref="GeneID:10488649" CDS complement(3071087..3072484) /locus_tag="B565_2732" /codon_start=1 /transl_table=11 /product="protein transporter, outer membrane secretin (secretin) family" /protein_id="YP_004393384.1" /db_xref="GI:330830432" /db_xref="GeneID:10488649" /translation="MLRTFAILLAMLPLWAAAAESLTLTPEQSTLLNFDEPVLDAFVA NSELVRVHSPSDQQLLIYGRKVGHTDLVVTALDGRTLGHYRVTVVADLAPLEQLARQH FPQSRLTFSESGGAIVVAGEVTSPLQAHEILSMVEGFAKGLQPQSVAQSTVMAPSPQA GNQDEGAAVAGGGSGQYANVINQLRLAGSDQINISVRIVEMQRTTSEQLGLRWSAMGE YLQLGVSPGNRFPKPLERGSWTGKKDVVYINAIIDALVENSLVNVLAEPNLTAKSGEA ATFMSGGEFPFPVGNGDNGPEIEFKKFGISLELTPTLLDNNRISLTVSPEVSTLSREN SVTIAGVVVPGIETRRTTTTIELADGQSFALAGLVRSHRNQNNEALPFLGEIPGLAPF FGSNSFKNQESELVIIATARLVQPTSDPLSLSTPLDHYRAPSRFERLFFTDMGSTQSP AAQTTRLFGNYGYSY" misc_feature complement(3071123..3072424) /locus_tag="B565_2732" /note="Flp pilus assembly protein, secretin CpaC [Intracellular trafficking and secretion]; Region: CpaC; COG4964" /db_xref="CDD:34571" misc_feature complement(3071243..3071725) /locus_tag="B565_2732" /note="Bacterial type II and III secretion system protein; Region: Secretin; cl02829" /db_xref="CDD:164025" gene complement(3072504..3073394) /locus_tag="B565_2733" /db_xref="GeneID:10488650" CDS complement(3072504..3073394) /locus_tag="B565_2733" /codon_start=1 /transl_table=11 /product="Flp pilus assembly protein CpaB" /protein_id="YP_004393385.1" /db_xref="GI:330830433" /db_xref="GeneID:10488650" /translation="MKKLFLLIAALLVLAAMLATLWPAEPAPQSGASPRDPPAESLAP DRVAQVLVAAHRVQAGSFIHPEDLRWQALPEAEERNLPGLFLFGFTDTKALKGSLVTR TLEAGQIVSADDLVRPEQSHYLSAMMAPGMRAVTLALGREAASHGLIRPGNRVDVILT SKHARQHNAQGAEVTSNQSAEIILTDIKLLAIDAQVTDIAALNGNPAAQDNFDQVAVT FELPPRAAARLLLAHRLGELALVLRSAQSAPAGSPAMALPEGSLIWAEQVARGQNPRA IPGHGVKISYGDGNDRTRQP" misc_feature complement(3072516..3073298) /locus_tag="B565_2733" /note="SAF domain; Region: SAF; cl00555" /db_xref="CDD:193866" gene complement(3073404..3073787) /locus_tag="B565_2734" /db_xref="GeneID:10488651" CDS complement(3073404..3073787) /locus_tag="B565_2734" /codon_start=1 /transl_table=11 /product="Leader peptidase PilD" /protein_id="YP_004393386.1" /db_xref="GI:330830434" /db_xref="GeneID:10488651" /translation="MVCWCLVSDLFERRIPNLAVLVLALWVGWLLPFNPLSLVLAILT LLLGLVAYHRGWCGAGDSKLLAVCLYGAGEQWPELLLLMAFSGGLLSLVCLIHSRLRP SPNPTTVPYGVAILWAAALTTPLFM" gene complement(3073817..3074014) /locus_tag="B565_2735" /db_xref="GeneID:10488652" CDS complement(3073817..3074014) /locus_tag="B565_2735" /codon_start=1 /transl_table=11 /product="Flp pilin" /protein_id="YP_004393387.1" /db_xref="GI:330830435" /db_xref="GeneID:10488652" /translation="MRVWDYLRDYLKDESGATAIEYGILAAGLAAGILAIFGSDGIFI TALKEKFTAIVAGLNMDAAGK" gene 3074241..3077246 /locus_tag="B565_2736" /db_xref="GeneID:10488653" CDS 3074241..3077246 /locus_tag="B565_2736" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393388.1" /db_xref="GI:330830436" /db_xref="GeneID:10488653" /translation="MFRTTKPLLLLLCCATLLACKAELGSPEQAGNNTSNSGGSGSNQ QPTTPDSGSGNNPGTAGGTASGGSASSSSGGSSGSGSGTTSPDQSGQPTTETTQPAPP TSLDLAGALPLTHEQGGQFDIQLCADKVCVTQSAQADGSFGFKLKLSQWPQDKALRLV ASHRQNSGLSLSSELPALTQLLKRDQNGDGIITEQESPRLHLSPMPLAYQSIMAALQK QEGKQDVSGQLFSDPHLNHRFARDLTALLQLTLNGDMPNPAQQLGELATALVSQQQSN PTSTLLEHLTTLATSQGTTLPDDAEARLNDALAAMEKLDTRTATYQLLTTFYPQRKLT LLGQYPSRLSEASVSVEIGAKPNHDGLNAHYFKPERPIRPQRLAVMAQSGRMQESLPI KQGNQYSITLTLADLNNSFASCKPGSSETSDDLMEDTLTLVVQDAKSEVELRSVLGSF CELVKRDENRDGMLGANEYPRLNVGYTTTAQWALLLKTTLSAGMGSFLDWQAWTLAEL DQKLKTLPRHQVELLAAMVALQVEGELWQQPVNLIEGTDFRQQLLSWLEINMANEYST VSRNNQIPDLFKLETTIAENSGLGPLLNANPDKNISHIIKAAAGLIRNSESDALLYPG TSTAGSWLTPYPNSPISPVCQREVLSDQVIGLAILGQGRDQDGSHWVTLGWQPQEGVS QYRIGWGKTPFEHIENAEQQDISQLTRITLKGLPHYQDYQIRVMSEGGTISAPLTYRA GQLHVADTRITHSMGLDDGKRGRDLDSRCDPLSGQAVNSNLDGVLGARYIKLDNRGDP LPRQDLSYKQMPFACVADALSGLVWETKVQHKDGESSLHDDKSLFAYDDIQSNNAFNG SCYDPQSGALASDRSRCNLKRQISQVNQSKLCGLSNWRAPSQQEFYGIMTLTRDNPIA LDTRYFPFNSGLSVTYGQWNAVETIFYGFWTSDVMPVSRPIGTWEKDDGGPDAYQVRP TTQLRGSIARQYQPHHVMLVSDGFKVTGE" gene 3077248..3077952 /locus_tag="B565_2737" /db_xref="GeneID:10488654" CDS 3077248..3077952 /locus_tag="B565_2737" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393389.1" /db_xref="GI:330830437" /db_xref="GeneID:10488654" /translation="MHHYLFPLLLTAALLPVASLARVCLPGYQDDDTRFVSELIDTAE GKLQVVNDRATGLQWLYCPYGQQVSDNGSGCEGMPEVINSRANPSDNPLMTIIMQAND RLNTPAHPWRAPDIKELFTLYNPQCQPGTYSAVGFPDPQLAADTETLKQRACEARYDP VTHKYIKPTEEQTQACNKLTEQSNALTMLQFISDSSSGDGYNYLQFEPSHEVFNEGGY SAPMLRLVRPIPNHSE" misc_feature 3077395..3077619 /locus_tag="B565_2737" /note="Protein of unknown function (DUF1566); Region: DUF1566; pfam07603" /db_xref="CDD:148943" gene 3078078..3078416 /locus_tag="B565_2738" /db_xref="GeneID:10488655" CDS 3078078..3078416 /locus_tag="B565_2738" /codon_start=1 /transl_table=11 /product="Small protein A" /protein_id="YP_004393390.1" /db_xref="GI:330830438" /db_xref="GeneID:10488655" /translation="MRMKHLIAAALTALTLSGCSLVYRIDIPQGNYVEQKQVDKLRQG MTREQVSYVLGTPMLRDGFDPNTWYYLYEFQPGHGDKERKELTVTFANDRLTTVTGDF PLPAAFNTPL" misc_feature 3078165..3078377 /locus_tag="B565_2738" /note="SmpA / OmlA family; Region: SmpA_OmlA; cl01095" /db_xref="CDD:194033" gene 3078601..3079230 /locus_tag="B565_2739" /db_xref="GeneID:10488656" CDS 3078601..3079230 /locus_tag="B565_2739" /codon_start=1 /transl_table=11 /product="nucleoside-diphosphate-sugar epimerase" /protein_id="YP_004393391.1" /db_xref="GI:330830439" /db_xref="GeneID:10488656" /translation="MSRILIAGASGLIGRELVQQLPAEHELTLLCRKPGKEAHHWLPV NFDDLASVTLFRPVDIAFCALGTTRKEAGSAEAFRRVDLDYVVAFAELARRHGCQRLI VVSSMGASTSSPALYPRTKGEMEQALLAQSWPRLAIVRPAMLLGDRQPPRLSEQIFQT IYPLFRPLLVGKLARWRAIEARQVARAMIALSKLPAGCEIVENEQLLAL" misc_feature 3078613..3079221 /locus_tag="B565_2739" /note="CC3(TIP30)-like, atypical (a) SDRs; Region: CC3_like_SDR_a; cd05250" /db_xref="CDD:187560" misc_feature order(3078622..3078624,3078628..3078639,3078694..3078699, 3078736..3078738,3078790..3078801,3078841..3078843, 3078853..3078855,3078910..3078918,3078949..3078951, 3078961..3078963,3079021..3079032) /locus_tag="B565_2739" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:187560" misc_feature order(3078844..3078846,3078916..3078918,3078949..3078951, 3078961..3078963) /locus_tag="B565_2739" /note="active site" /db_xref="CDD:187560" gene complement(3079375..3081069) /locus_tag="B565_2740" /db_xref="GeneID:10488657" CDS complement(3079375..3081069) /locus_tag="B565_2740" /codon_start=1 /transl_table=11 /product="Decarboxylase, group II" /protein_id="YP_004393392.1" /db_xref="GI:330830440" /db_xref="GeneID:10488657" /translation="MSDLVYLQDESVNAVHPDFSARFATVKANFFSRNPDLWPVFREP GFATLNEFRARGLAPDARLNAWPDGRARLADLCETMPVPATMRTPGEPMAELLFAAAL SKDWENPSSVENVITMSADPAIYGAQLGILANPNLVYSEYAGVAEELEKKVVRQIALL AGYDPERATGIFTQGGTFCNLYGYLLGIRKTLPEAKHKGLGHYQDYRIINSQGGHYSN ITNLSLLGVDIENKTIRIQVGENNDIDLDHLERTLTACFALKHVVPTIMLTMGTTDTF GVDQVKPVFELRNRLCEQFEVAVKPHIHVDAAIGWSMIFFLGYDFAANPLAINSATLA GIERNVARFAELKYADSFTVDFQKWGYVPYTSSLVMIKEQDDLKAMENDPENFSYFER DIQGQTHLQSTIECSRGASGLFGAYAALNYMGIEGYRTVLAHCLQNANYFRYRLSQLG NVKLVAQENQGPSVGFKIYNPEWVSDPEAEFAFELARSSDPAYKARLQRNTDYHRSLF KGRGKVGLYTNWVEAVAHSDYDARGKYSYIAGEKAVFMNPACTREQIDAFIDHIRG" misc_feature complement(3079381..3080655) /locus_tag="B565_2740" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl00321" /db_xref="CDD:193768" misc_feature complement(order(3079996..3079998,3080005..3080007, 3080143..3080145,3080152..3080154,3080263..3080265, 3080530..3080532,3080539..3080544)) /locus_tag="B565_2740" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99742" misc_feature complement(3079996..3079998) /locus_tag="B565_2740" /note="catalytic residue [active]" /db_xref="CDD:99742" gene complement(3081292..3082308) /locus_tag="B565_2741" /db_xref="GeneID:10488658" CDS complement(3081292..3082308) /locus_tag="B565_2741" /codon_start=1 /transl_table=11 /product="lipoyltransferase and lipoate-protein ligase" /protein_id="YP_004393393.1" /db_xref="GI:330830441" /db_xref="GeneID:10488658" /translation="MSRLRLLVSDSHDPLFNLAVEECIFRQMDPGQRVLFLWRNANTV VIGRAQNPWKECNTRHMEEEGVTLARRSSGGGAVFHDLGNSCFTFMAGKPEYDKSVST AIVLDGLKRLGIEAFASGRNDLLVATPDGERKVSGSAYRETLDRGFHHGTLLLDADLG RLANYLNPDPKKLAAKGITSVRSRVANLCELQPGIDHRQMSEALQEAFFHHYGARVEP EHISPEQMPALPGFAETFARQRSWEWNYGHAPAFSHLLEERFSWGGVELHFDVEKGVI TRAQLFSDTLEPAPFDLLVAELAGCGYRPDAVAARLQPWLAAFPQQQSELAEFAEWLL ASLR" misc_feature complement(3081295..3082308) /locus_tag="B565_2741" /note="lipoate-protein ligase A; Provisional; Region: lplA; PRK03822" /db_xref="CDD:179655" misc_feature complement(3081835..3082173) /locus_tag="B565_2741" /note="Biotin/lipoate A/B protein ligase family; Region: BPL_LplA_LipB; cl14057" /db_xref="CDD:187213" misc_feature complement(3081313..3081567) /locus_tag="B565_2741" /note="Bacterial lipoate protein ligase C-terminus; Region: Lip_prot_lig_C; pfam10437" /db_xref="CDD:151014" gene complement(3082529..3082717) /locus_tag="B565_2742" /db_xref="GeneID:10488659" CDS complement(3082529..3082717) /locus_tag="B565_2742" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_004393394.1" /db_xref="GI:330830442" /db_xref="GeneID:10488659" /translation="MSRLDSSNFVSPARGEKAFAMGYRGVGKSFLCRSSHGMDTCRFF ASYVTNKRVIWPIEVVAF" gene 3082787..3085201 /locus_tag="B565_2743" /db_xref="GeneID:10488660" CDS 3082787..3085201 /locus_tag="B565_2743" /codon_start=1 /transl_table=11 /product="PAS:GGDEF domain-containing protein" /protein_id="YP_004393395.1" /db_xref="GI:330830443" /db_xref="GeneID:10488660" /translation="MLVGMVIATLTSPPVRAGEQVIVQLPWQHQFQFAGYYAAIAKGF YREAGLHVTLREADSRTDVVSEVISGKAQFGISGSDLLLDRAAGRPVVVLAALLQHSP LVLLTLDRPDIRNPADLANKRLMLEPGSNELLTYLSHHTSSRDWVTLPYKQGIEALLA GKVDAISAYSTTEPFYLQQKGIPYRVFSPRTIDFDFYGDNLFTSERELITRQDRVYAF QQASLKGWRYAMDHPEEMINLIMEQYPTGAGREQLEFEARETRELMQPDLIEPGYMQQ ERWLQIAKTYLEAGMLTVLPNLDRFIYDPAQERLRQQRQLFDKSVAVAMLITFTLMTL LGIFLHLYLRLRQEARDRQRLTRELAQSEQHYRFVAENSADVIWTMDAASLRFRYVSP AITPLSGYEAPELFALPLKQLLPDASRQLLREEISATLEAWQRGEHDQTRRVIRTQLR HKDGHLVATETITTLHGNHNAQPEAILGVTRDITERAAREEMMRRLAFYDPLTGLPNR RLLQQRLKELMEQETPRPLALMFIDLDHFKPINDTFGHETGDILLNMVAERMSHCVRK QDLVARLGGDEFVILLPDSGDEVLAVADKLHQQLRHPFQLEGQELLISSSIGLALYPE HGEDAKTLMHHADQAMYQAKNRGRGRVCLYTEGLDPEQGALLWQPGHECGHPRIDAEH RQLFVLTNRLLERMKDQHEAPAPFLESLESLFDMARHHFAFEEQMLAEIDYQELVSHR QDHQRLLNKASQLLHAAKAGTLGNDELLNFIIQELVVGHMSQADRRYFPLFRSERNAP VAEVVA" misc_feature 3082787..3083713 /locus_tag="B565_2743" /note="ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]; Region: TauA; COG0715" /db_xref="CDD:31059" misc_feature 3082880..>3083344 /locus_tag="B565_2743" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature order(3082961..3082963,3083039..3083041,3083177..3083179, 3083291..3083293) /locus_tag="B565_2743" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(3083240..3083242,3083252..3083254,3083270..3083272) /locus_tag="B565_2743" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 3083870..3084238 /locus_tag="B565_2743" /note="PAS domain S-box; Region: sensory_box; TIGR00229" /db_xref="CDD:161776" misc_feature 3083876..3084079 /locus_tag="B565_2743" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature 3084278..3084742 /locus_tag="B565_2743" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(3084383..3084385,3084512..3084514) /locus_tag="B565_2743" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(3084398..3084400,3084407..3084412,3084422..3084424, 3084434..3084436,3084500..3084502,3084506..3084517) /locus_tag="B565_2743" /note="active site" /db_xref="CDD:143635" misc_feature order(3084488..3084490,3084569..3084571) /locus_tag="B565_2743" /note="I-site; other site" /db_xref="CDD:143635" misc_feature 3084785..3085159 /locus_tag="B565_2743" /note="hemerythrin-like metal-binding domain; Region: hemeryth_dom; TIGR02481" /db_xref="CDD:162878" misc_feature 3084785..3085147 /locus_tag="B565_2743" /note="Hemerythrin (Hr) is a non-heme diiron oxygen transport protein found in four marine invertebrate phyla including priapulida, brachiopoda, sipunculida, and annelida, as well as in protozoa. Myohemerythrin (Mhr), a hemerythrin homolog, is found in the...; Region: Hemerythrin; cl11605" /db_xref="CDD:196268" misc_feature order(3084785..3084793,3084800..3084802,3084812..3084814, 3084821..3084826,3084833..3084838,3084842..3084847, 3084854..3084859,3084917..3084922,3084926..3084943, 3084950..3084955,3084959..3084961,3084971..3084979, 3084983..3084985,3085025..3085027,3085037..3085039) /locus_tag="B565_2743" /note="octamerization interface [polypeptide binding]; other site" /db_xref="CDD:29622" misc_feature order(3084830..3084832,3084944..3084946,3084956..3084958, 3085001..3085003,3085013..3085015,3085121..3085123, 3085136..3085138) /locus_tag="B565_2743" /note="diferric-oxygen binding site [ion binding]; other site" /db_xref="CDD:29622" gene complement(3085253..3086452) /locus_tag="B565_2744" /db_xref="GeneID:10488661" CDS complement(3085253..3086452) /locus_tag="B565_2744" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="YP_004393396.1" /db_xref="GI:330830444" /db_xref="GeneID:10488661" /translation="MRAADLLFWLWRALLAGRSRSLLSALGIAIGIASVTLLTGIGEG LRLYLLDSFSQFGTRLIAVTPGKTETAGGPPGILSSSRPLLLEDADALARLAGVEAAL PVVQGQGEVRSRGLTRSTAILGTGPAALSGWCLTLVQGRFLPADDSAMPRAYAVLGAK VAAELFPGGDAPGSLLRAGDRRFRVAGVLAPKGQFLGFDLDDMIYLPAAHAQALFNKE GLQEIDVIYRAGQAEAEITAQIRRLLIARHGAEDFTLTSQQDMLTSLDKILSIIKLAV GGLGIISLLIGAVGIFSIMSIAQQERIPEVGLLMALGCPRRRILLLFLLEAVVLALLG GAMGLALLGGLKLLLTLLAAGLPLTLHPLYLLLALGCSALVGLLAGVAPALRAVRLDP VVALRGD" misc_feature complement(3085658..3086305) /locus_tag="B565_2744" /note="MacB-like periplasmic core domain; Region: MacB_PCD; pfam12704" /db_xref="CDD:193180" gene complement(3086452..3087666) /locus_tag="B565_2745" /db_xref="GeneID:10488662" CDS complement(3086452..3087666) /locus_tag="B565_2745" /codon_start=1 /transl_table=11 /product="antimicrobial peptide ABC transporter permease" /protein_id="YP_004393397.1" /db_xref="GI:330830445" /db_xref="GeneID:10488662" /translation="MRRPDVIRFAAVALLRQRSRALVLILAVSLSVTSVLLLTALGEG ARRYVADQFSSLGKDLLVMFPGRKETTGGLPPVTGNSLRQITLDDMHYLGQHQPNVRL VPLVMGFAEAKQGARLRQTMLLGSSNGLRDTHGLTLLSGRWLPGDAAEDRPAVLLGAK VARELFGQVDPVGQWLRFDNRRFRVVGVFTSQSSNLGMDMAEAALIPVGSAMRLFNTE GLFRLLIQPLAGQAVPPLVKRLEQLMQARHGVLDVTVVRRDAMLATFSTILSTLTLAV AGIGAISLLVSGIMMMNLALISTRQRTGEIGLLKALGADSRQIRQLFLWEALLLSGSG ALFGTVLGYALVALAGVIWPGFPAAVPLLATFCTIPAALLTGLFFSWLPASRAARQDP VSSLRSGQWSGG" misc_feature complement(3086473..3087543) /locus_tag="B565_2745" /note="ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]; Region: SalY; COG0577" /db_xref="CDD:30922" misc_feature complement(3086872..3087522) /locus_tag="B565_2745" /note="MacB-like periplasmic core domain; Region: MacB_PCD; pfam12704" /db_xref="CDD:193180" misc_feature complement(3086491..3086832) /locus_tag="B565_2745" /note="FtsX-like permease family; Region: FtsX; pfam02687" /db_xref="CDD:190390" gene complement(3087667..3088374) /locus_tag="B565_2746" /db_xref="GeneID:10488663" CDS complement(3087667..3088374) /locus_tag="B565_2746" /codon_start=1 /transl_table=11 /product="antimicrobial peptide ABC transporter ATPase" /protein_id="YP_004393398.1" /db_xref="GI:330830446" /db_xref="GeneID:10488663" /translation="MSDLIRLDAVSRRFTLGGSEVAALDRVSLRVAEGEYLAVMGPSG SGKSTLLNVLGLLDRPDEGRYWLGGEDTATLSEPALAQLRGHRIGFVFQSFHLISRLT ARENVELPLMLCGIAPAERHRRSQQLLGELGLENRAGHRPAELSGGQRQRVAIARAMA MAPRLILADEPTGNLDSRSGEEVITLLEGLNQEQGITLVVVTHDPRLGDRAGRRILMN DGRISTDSIDSTNSGGG" misc_feature complement(3087691..3088365) /locus_tag="B565_2746" /note="ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]; Region: SalX; COG1136" /db_xref="CDD:31331" misc_feature complement(3087709..3088362) /locus_tag="B565_2746" /note="This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together...; Region: ABC_MJ0796_Lo1CDE_FtsE; cd03255" /db_xref="CDD:73014" misc_feature complement(3088231..3088254) /locus_tag="B565_2746" /note="Walker A/P-loop; other site" /db_xref="CDD:73014" misc_feature complement(order(3087766..3087768,3087865..3087870, 3088096..3088098,3088228..3088236,3088240..3088245)) /locus_tag="B565_2746" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73014" misc_feature complement(3088096..3088107) /locus_tag="B565_2746" /note="Q-loop/lid; other site" /db_xref="CDD:73014" misc_feature complement(3087913..3087942) /locus_tag="B565_2746" /note="ABC transporter signature motif; other site" /db_xref="CDD:73014" misc_feature complement(3087865..3087882) /locus_tag="B565_2746" /note="Walker B; other site" /db_xref="CDD:73014" misc_feature complement(3087847..3087858) /locus_tag="B565_2746" /note="D-loop; other site" /db_xref="CDD:73014" misc_feature complement(3087760..3087780) /locus_tag="B565_2746" /note="H-loop/switch region; other site" /db_xref="CDD:73014" gene complement(3088367..3089506) /locus_tag="B565_2747" /db_xref="GeneID:10488664" CDS complement(3088367..3089506) /locus_tag="B565_2747" /codon_start=1 /transl_table=11 /product="RND family efflux transporter MFP subunit" /protein_id="YP_004393399.1" /db_xref="GI:330830447" /db_xref="GeneID:10488664" /translation="MKRGWLWWVSSAVVAVAAVAWWWRPQPTPIRLAEVGRGDVLVTV VNTRAGTIKSCQRAGLSLPGGGVVEQIAVKAGERVARGDLLLTLWSDDIHADLARARA QQALGKTQREERCSEAAYYEREANRLATLLAKNLTSRTLAEQAQNLADTRRYVCQASR QQERVDEAQVAQVEARLSERRLQAPFAGVVAEVNSKLGEYMTPSPPGVTMPPVIDLID DRCLYVSAPIDEVDAARLKVGQSARVLLDAMPGRDFAATVTRIAPYVKELEKQARTVE VEAALTALPTDVPLLIGYSADLEVEVTRATDVLRVAASSRADDGSVLRLEGDTLVRVV PRWGVENWNWIEVAEGLAAGDRLAAQPGQIVGEGPFSAATEQTDE" misc_feature complement(3088412..3089359) /locus_tag="B565_2747" /note="RND family efflux transporter, MFP subunit; Region: RND_mfp; TIGR01730" /db_xref="CDD:162505" gene complement(3089534..3092710) /locus_tag="B565_2748" /db_xref="GeneID:10488665" CDS complement(3089534..3092710) /locus_tag="B565_2748" /codon_start=1 /transl_table=11 /product="AcrB/D/F family transporter" /protein_id="YP_004393400.1" /db_xref="GI:330830448" /db_xref="GeneID:10488665" /translation="MSSELNGNKERLGPAGRLAALFQGSAITPLLALLGLLLGLFAVL VTPKEEEPQIDVTFADVYIPFPGASPAEVASLVTTPAEQVVSQIKGIDTLYSFSQPDG ALLVVVFKVGVSREQAIVDLNNQLESNRDWLPQGIGVGQPLVKPRGIDDVPIVSLTLW SKDWSKEGSKQLGAPELTRVAHELETELKRIPGTRDIYTLGSQSAVLRVMPDPAALSA HGISWGELSQRLAAANQVGTTQAIEQDNSEIKVQVGQFLQSEQEARELVVGLHDGKPV YLGDVARVSLGQETPTKRSWMGLGDRSYPAVTLAIGKQPGQNAVDVAKRVEARVESLQ NRLIPAGVEVTVTRDYGVTAETKSNTLIGKLIFATTAVVLLVLVSMGWREALVVGVAI VITLALTLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRHRGLGKGALKDL IPGAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGMLISLLVAFIF SPWLASHLLKGEVHGAHGEAKAGLFHRLMTPFLIGDGAKRARRKLWLAVLLLVGAATA MPVVQWVVLKMLPFDNKSEFQLVLDMPEGATLEQTERTLLAVGRELAKVPEVKDYQIY AGTAAPINFNGLVRHYFIRSGANVGDIQVNLVDKHERDRSSHQIAQSVREPLQAIASA AGGNLKVVEVPPGPPVWSPIVAEIYGPTQAAREAAARAVQARFVATADLVDVDIYLTD SQPKWRLVVDRSKAALLGVDLGDLVNTLNGGVGYQDASWLQGHGAKYPVPIRIELAPG DKRDLAGVLALKVRSQSGQLVRVSELVSRRDEVAPSYIMHKNMQPMVMVVADMGGHTD SPLYGMFAAGADIDLPQYYVQQPDKLGEVALLWDGEWKITYETFRDMGIAYGVGMILI YLLVVAQFRSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAGIIVRNS ILLVDFIEQQRSAGVAFEQAVIEAAQVRAKPIMLTALAAMIGALFILDDPIFNGLAIS LIFGILVSTLLTLVVIPLLYYALLSRST" misc_feature complement(3089609..3092572) /locus_tag="B565_2748" /note="Cation/multidrug efflux pump [Defense mechanisms]; Region: AcrB; COG0841" /db_xref="CDD:31183" misc_feature complement(3089609..>3090004) /locus_tag="B565_2748" /note="Protein export membrane protein; Region: SecD_SecF; cl14618" /db_xref="CDD:176628" gene complement(3092703..3093746) /locus_tag="B565_2749" /db_xref="GeneID:10488666" CDS complement(3092703..3093746) /locus_tag="B565_2749" /codon_start=1 /transl_table=11 /product="AcrA/AcrE family protein" /protein_id="YP_004393401.1" /db_xref="GI:330830449" /db_xref="GeneID:10488666" /translation="MMEKIRLLGITLLVMTSQAMTSPRAFAADGEPEPLLTVVPQPVT