>gi|319760739|ref|YP_004124676.1| chromosomal replication initiator protein dnaa [Alicycliphilus denitrificans BC]
MHEGPSHSSHDTDGDSAGQGLWQACTEQLAQDLPEQQFNTWIKPLVAQVSPDFSKVTLLVANRFKLDWIR
AQYAGRISALLEELYGQPVTLELALAQRESVARTYVRPVPASIEAPAANAPAGAAAEEPPAGAFRTRLNL
ALTFDTLVEGTANRMARSAAMHVAGSPGHLYNPLFIYGGVGLGKTHLVHAVGNKLLADRPDAKVLYIHAE
QFVSDVVKSYQRRTFDDFKERYHSLDLLLIDDVQFFANKDRTQEEFFNAFEALLAKKSHIVMTSDTYPKG
LANIHERLVSRFDSGLTVAIEPPELEMRVAILINKARAEHAEMPEEVAFFVAKNVRSNVRELEGALRKIL
AYSRFNQKEVSIQLAREALRDLLSIQNRQISVENIQKTVADYYKIKVADMYSKKRPASIARPRQIAMYLA
KELTQKSLPEIGELFGGRDHTTVLHAVRKIGAERQQLTELNQQLHVLEQTLKG
>gi|319760740|ref|YP_004124677.1| DNA polymerase iii, beta subunit [Alicycliphilus denitrificans BC]
MIVLKATQDKVLAVLQSVSGIVERRHTLPILANVLIRKTGNALQFTTSDLEIQIRTTAELGGDTGDFTTT
VGARKLIDILKTMPADQTVSLENSQTKLILKGGKSRFTLQTLPAEDFPLVQEAASFGPAFSVPQKTLKTL
LSQVSFAMAVQDIRYYLNGILFVAEGKTLSLVATDGHRLAFASSELDMEVPKQEVILPRKTVLELQRLLS
DADGAIEMRFANNQAKFGFGGMEFVTKLVEGKFPDYNRVIPRNHHNVITLGRAPLLASLQRTAIMTSEKF
KGVRLNIEPGSLRVASSNAEQEEAVDELDIDYGGDSIEIGFNVTYLIDVLANMGQDMVRMELADGNSSVV
FGIPDNTHFKYVVMPMRI
>gi|319760741|ref|YP_004124678.1| DNA gyrase, b subunit [Alicycliphilus denitrificans BC]
MTDENQPDPQTTAPASVDAGGYGEGAIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDEALA
GHCDDIVVTIHTDNSISVIDNGRGIPTGVKMDDKHEPKRSAAEIALTELHAGGKFNQNSYKVSGGLHGVG
VSCVNALSKKLRLTVRRDGKTHQLEFSKGVVQNRLIEVVDGFEVSPMKIVGPTEKRGTEVRFLPDTEIFK
ENSDFHYEILAKRLRELSFLNNGVRIRLIDERTGKEDDFSGAGGVKGFVEFINGTKKVLHPTAFHATGAR
PAESYGGIPGTEIGVEVAMQWNDGYNEQVLCFTNNIPQRDGGTHLTGLRAAMTRVIGKYIEQNELAKKAK
VDVSGDDMREGLCCVLSVKVPEPKFSSQTKDKLVSSEVRAPVEDIVAKALTEYLEEKPQDAKILCGKIVE
AARAREAARKAREMTRRKGVLDGMGLPGKLADCQEKDPALCEIYIVEGDSAGGSAKQGRDRKFQAILPLR
GKILNVEKARYEKLLSSNEIITLITALGTGIGKASEDGNGKSGADDFDAAKLRYHRIIIMTDADVDGAHI
RTLLLTFFYRQMPELVERGHIYIAQPPLYKVKNGKEELYLKDAAALDNFLLRVALNHASISTGGDAPRTL
AGDELATLARTHQHAERVIDRLSAFMDAEALRAAADGVAFNLDTLEDAQASAVQLQARLRELNTSGVPAD
VTGEIDPRTDKPILRISRHHHGNIKSSLITQDFVAGDDYAALAEAAESFRGLIQEGAKVMRGEGEKQKEE
KISDFRQAMQWLIGEAERTTARQRYKGLGEMNPEQLWETTMDPEVRRLLRVQIDDAIEADRVFTMLMGDE
VEPRRDFIETNALRAGNIDV
>gi|319760742|ref|YP_004124679.1| hypothetical protein Alide_0004 [Alicycliphilus denitrificans BC]
MRSPIAIVDVDRPDTWTRYRSGLCNSCAANCCTMPLEVQLPDLVRLGLVDPFEAEHVAPKLIARRLLKAR
LVDHYSPRHGLFTMARRADGDCGFLDAATRLCTVYERRPETCRLHPQTKSPRPGYCAYGARTLQRRG
>gi|319760743|ref|YP_004124680.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MASLDGLKVVDLSRVLGGPLCAQILGDHGADVVKVEGPAGDETRTWGPPFNDAGMASYFAGINRNKRTVC
VDLSEPEGRDVVMRLLQDADVLVENFKVGTLERWGMGYDEVLRERFPRLIHCRVTGFGATGPLGGLPGYD
AAVQALSGLMSINGDPDGVATRMGVPIVDVTTGLNAVIGILMALHERERSGRGQSVESALFDSALFSLYP
HSINTLFTGRAPQRSGNGHPNIAPYDTYATATEPIYLAVGNNGQFQRLCEAVGHAHLAEDERYATNAQRA
VHRFELKKDLQSAFSSFDAQTLFRKLVAVGVPCGVIQNVVEALAHPHTAHRGMVAEVEGFRSVASPIKFS
RTPASYRLRPQEIGQSTLQVLGEAGLSQEQITLLLERGVIRQAPRPE
>gi|319760744|ref|YP_004124681.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MQAEDSEAWVLASRVGPVARIHLNRGDARNPLGVEMVQALSAAVGEASGQSGVRVILLTAAGPAFSAGGN
LGNLGDRLAATAGPDGRDPIAAGNRRYGEFLTQLVNVPQVTVACVQGAAMGGGAGLACAVDIAIGSPEVK
FGFPEAAIGLVPGQILPFVAARLGLPAARRLVLTGRRIAAAEAHRIGLLDYVAESHQALGALTRQVLESV
VATAPQASACTKRMLGRLPVAPLQASGALQGYLDEAAELFARQMRSEAMEGVSAAREKRPARWNEAGELS
ALDLA
>gi|319760745|ref|YP_004124682.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MRNLDIGLLRTFVAVAERESFTNAAEKVYRTQAAVSQQMQKLESVLGCALFERVGRRKKLTVEGVRLLEY
ARRMVGLNDEAYRVITQQAATQPVKIGACADAVDTLLPAYLEICAENFPNLSIDIQVGRSRWLASALRKG
DIDLMLDITPHPEFAHTVLRTSPVAWIAGARYHPQAGASVPLILMEAACPFRSSMVQALTEAGIPWHAAF
ETSTLAGVRAALRAGLGVTARAVEMLAPDLRVLDPQARLPALPPISFCLYWRADASHESAMKVRHLIAPH
>gi|319760746|ref|YP_004124683.1| extra-cytoplasmic solute receptor [Alicycliphilus denitrificans BC]
MQILNHESRLSRRELLRSAGAMGLGMAAGLPALAQGAGAADFRLDKQVRIIVAYGAGGASDAIARYVGDA
IAQRGGKPVIVENRPGADGNIAAEAVVRAPTDAYNLLVSGSSTHAANATIYKKLAYDPDKDFTPLATMAN
TPYAMLVNPKRIAQTTAADFLAWARKDGQTLSFASANVGGRIAGERFKQLTRINAVNVPYKSSAQAMTDL
IGGQFDYYFCDMLTALPQIKAGTVRALALSSSKRIASLPDVPTVAELGYPDFDVSSWIAIWSARATTPQP
VSAALSRWIGEALESPAGQDFLVKKGLVPTPVSPEHLLHLQARDTRDWGRIIIEAGMQQP
>gi|319760747|ref|YP_004124684.1| hypothetical protein Alide_0009 [Alicycliphilus denitrificans BC]
MNQTVLIGGASGFWGDSQIAVPQLLRQPGLQYLVFDYLAETTMSILQRARLRAPELGYATDFVTAAVGPH
LREIKAKGVRLVSNAGGLNPAGCRDAILALAREQGVDLKVAIVTGDDVLDLQPRFEPWGDEATADLPALM
SANAYLGAAPVAQALAAGADIVVTGRCVDSASLLGIAIHEFGWRMTDYDRLAQASLAGHLVECGAQATGG
LFTDWEQVPDWADIGYPLVRLQADGSFELSQPEGAGGLVTRQTVGEQLLYEIGDPAAYELPDVVCDFTQV
AITDLDGGRVRVQGARGRAPGGRYKVTATYQQGWHIAIMMAIRGQRALAKAQRTADALLARTRRQMQAAG
FADYEDTLVELLGAESMYGPHRRVADSREIVLRIAARHRDRRALAFLQKEASSAGTSMGPGTRSHFGGRS
DVQSIIRTASFLLPKAAVAVQVQAAPDEAPAAVEAADAAAAPAAPNPPEATAAGAAASGPTVRIALGRIA
HGRSGDKGDDANIGLMARDPKWLPVLRGQLTAERVLQYFAHLVQGPVQRYELPGLGAFNFVLRRALGGGG
SCSLRSDPLGKCYAQMLLDMEIDCPEDLAP
>gi|319760748|ref|YP_004124685.1| carbamoyl-phosphate synthase l chain ATP-binding protein [Alicycliphilus denitrificans BC]
MRFDTLLVANRGEIALRILRTARRMGLRTVAVYSDADAHGPHVRAADMAVHIGPTPADQSYRNGAALIEA
CRRTGAQAIHPGYGFLSENAEFAQAVADAGLVFVGPSARVIALMGNKAQAKQAMQAAGVPTVPGEQGCAT
QEQIAAAARRIGFPVILKAAAGGGGRGMRVVREAGDLAEMFRQAQSEAAGAFGSGEIIIERAIERGRHIE
VQVLCDEHGRCLHLGERDCSTQRRFQKLIEEAPSPAVDAALREAMGQVARQACEAIGYTGVGTLEFLLDD
QKRFYFMEMNTRLQVEHGVTELVTGLDLVEQQIRVAQGEALTFGQQDVRLKGHAIELRLCAEDPWAGFLP
QVGTVGEWQAPAGIRTDSALASGMAISPFYDSMVAKLMAWGESREACIAQLARACERTTALGVRTNLGFL
ARCLRHPRFAQGQVTTDFLAQEDLQQPFWRRAPSAHALAAAALVLGGAVKTAMAGPAERLGGRSLWLRDA
TAGGTTMQCTLARDAAGLVLHCGERAPGKAAVEDAQASSWQIAHLRWHDEAGGARLGLAIEGIYRELACW
QEAAGRLWVQDGADAFVFERVERFEAAGARQGSGLLRAPMSGRVIAVLAGEGQSVAQGDPLVVIESMKME
MPLAAPCAGRIARLHVGEGQQLDAGQAVLEVDSEEEKETP
>gi|319760749|ref|YP_004124686.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MMTSDHIALQDSVRKLIEREIEPHVDEWEAAEIFPAHEVFKKLGSAGFLGVNKPVEFGGMGLDYSYEIAF
CEAIGGISSGGVGMAIAVQTDMATPALTHFGSDELRELFLKPTVAGDMVVCLGVSESGAGSDVASLKTTA
RKDGDDYVINGSKMWITNGTQADWMCLLANTSEGDVHRNKSLICLPLRENGKLRPGISMQKIKKVGMWAS
DTAQVFFDEVRVPQRYRIGEEGKGFTYQMRQFQEERLSGATRRVTALSNVIDETIAYTRQRKAFGRSILD
NQAVHFRLAELKTEVEMLRSLIYRAAQVHMGGGDMTELASMAKLKAGRLCREVTDSCLQYWGGMGFTWEN
KVSRAWRDLRLISIGGGADEIMLTIICKHMGILPKRA
>gi|319760750|ref|YP_004124687.1| methylcrotonoyl-CoA carboxylase [Alicycliphilus denitrificans BC]
MAEKTGTGQAPGGAQRNRAHMLERIDEVRRLEQRAVERSARSARHFHAQGKLLPRERLAHLLDADRPFYE
LMTLSGYCGLEDPNPATSVPGSALIVGIGHISGVRCMVAVNDSGISAGAMQALTGQKLIRAQEIALAQKL
PFVQLVESAGGNLRKYRVERFVVGGGMFYSLARLSAAGLPVVALIHGSSAAGGAYLPGLSDYVVMVRGQA
HAYLAGPSLLKAATGEEASDEELGGADMHAAVSGLADYVADNDLDGIMRVREIMQRIGWHGAPAPQAAPP
LHDADELLAIMPADMRTPVDMREVIARLVDGSEFHAFKERFGPATVCGYAAIEGHAVGILTNNGPLDSDG
SNKAAQFIQLCVQLGRPLVFLQNITGFMVGRRHEEAGMIKHGAKLIQALSNAPVPRFTVLCGASYGAGNY
GMCGRAFKPDLLFSWPNARTAVMGGEQAAMTMRTVAENAARRGGKDVDEQALAAESRAIVHTFESQSSAI
HTSSLLLDDGVIDPRETRAWLGMALATAFDARERAVQPMQFGVARL
>gi|319760751|ref|YP_004124688.1| acylphosphatase [Alicycliphilus denitrificans BC]
MSQANATIARHLHIHGRVQGVYYRQSMIEAARRLGVRGWVRNRSDGSVEALAAGPAPAVQVLIDWARAGP
PAARVERVDVQEADAAQLSGLPAGFDRRETL
>gi|319760752|ref|YP_004124689.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alicycliphilus denitrificans BC]
MLSPMHAPRKALPAIDPDRCTGCGWCVAACPPHVLSLQVQGMERFGAKRSVLHDAPGCTGCALCALRCPF
DAIRMVRTTARRGEHGQDIEAKVD
>gi|319760753|ref|YP_004124690.1| homoserine dehydrogenase [Alicycliphilus denitrificans BC]
MFLEPQPSLLPETRAHAPATPPALRVGMIGMGTVGAGVWRVLRRNQALIAARAGRPIDIVAVAARTPARA
AAVLEGAPGVRLLADPMRLATDPGVDVVLELAGGSGAARGWVLAALAHGKHVVTANKALLAEHGEELATV
AARHGRTLAYEAAVAGGVPVVKALREGLAANRIHALAGVLNGTSNYILTRMQAGGLDLAAALAEAQALGY
AEADPALDVDGTDAAHKLALLAANAFGMPVRLDAVHVEGLRGLRQGDVAAAAQLGYAVRLLAIARRGAEG
VELRVHPALVPERHALARLSGAANGLLVQGDAAGEAFYGGAGAGGEPTASAVLADLVDLARLPAGAHARA
GVPTLGVHSRAAEQPAPLPMAQVRTRHFLRLLPGAALNEAEALRLLARAGLSVQRRAWGPAPEGGAAPTL
LLLTAPAPDAVAAHAAARLHERTGAIVRRLRVEDFSSSEYA
>gi|319760754|ref|YP_004124691.1| helicase c2 [Alicycliphilus denitrificans BC]
MSTQPWAGQALQSFEAVVQSTAGFRVREGQRRMAEQVAQTFAQAQLGKLEDEDSQPRRAIAVVQAGTGVG
KSLAYSVPAIAMALARGTRVLISTATVALQEQLVHKDLPALAARMEQPFQFALAKGRGRYVCKLKLERLA
GGAAGGEDGVPDDDLFPEEAAAQRQRPRHDAEARMRFYASMADALATGGWDGDRDTLDSPPEPEAWSPVA
AEASSCTGKHCPLFSQCTYYERRKALVAAQVIVANHDLLLSSLGARLLPELDNCLLVIDEAHHLPATALQ
QFACEADLSRLTWIDKLASRALRIGQLVEVEEIADIPNHAARLRAALQDAARLVMDLYGEQLRAPLPGRR
QFSASMPTRARVQGGVLPEALAEPFSQAAHHAGGFLDALRAIAKALRGEMRDKPDEARRLSQLYAQIGAL
APRLEGVHAAAQLLLQDAPDGAVPAAKWFTLETDGDFIVVRAHASPVLPGSTLQNHLWSAVRGAVLTSAT
LTGCGQFDFFLREAGLWGDDAVTTLAVPSPFDYALQGTLVATETRAEPRDAQAFTAEMVDALLSDLALVE
AGALVLFTSREQMRQAVDLLPTAMRGAVLVQNTLPRPQLLARHRERVADGLPSIIFGMQSFGEGLDLPGR
LCESLFITKLPFAPPDDPVGEARAEWLRGAGRDPFSELVVPATAIRLAQWVGRAIRTEEDRAHVYCYDKR
LVRTGYGQRLLAGLPPFALQRRAA
>gi|319760755|ref|YP_004124692.1| DNA-directed DNA polymerase [Alicycliphilus denitrificans BC]
MPSPIAVIDFETTGMTPAQGARATEVAIVLMEGERVVDRFASLMKTGVWIPPFITRLTGITNAMVDAAPA
AEPVMREAARFVGDAPMVAHNAAFDSRFWQSELRHAGLDAPHPFACTVLLSRRIYPDAPSHSLGRLTDHL
GLPRTGRAHRALADAEMAAALLARMQHELCRRFGLDWPDHALLMRLQRCARQSMGRMLLEQRQIANASG
>gi|319760756|ref|YP_004124693.1| nlp/p60 protein [Alicycliphilus denitrificans BC]
MRSLALPALMLAAGLLAAGCGTAPHGAPRASAYPRLSSEQSSDIAIHALGLVGTPYRYGGNTPDGGFDCS
GLIGYVYGSRAGVAPPRTVALLSGFGEPVDEDELRTGDLVVFGGSRPTHAGIYVGGGRFVHAPSTGGTVR
LDHLQSRYWAQQHASFRRP
>gi|319760757|ref|YP_004124694.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Alicycliphilus denitrificans BC]
MTLTDRPHPTPSTHDTTRIDDLRIKAVRPLITPAILEEWLPASDAAQALVEESRLQISRVLHGQDDRLIV
VVGPCSIHDHDQAMEYARQLLAQARALAQDLLIVMRVYFEKPRTTVGWKGYINDPHLDGSFAINEGLERA
RALLLDILALGLPVGTEFLDLLSPQFISDLVSWGAIGARTTESQSHRQLASGLSCPVGFKNGTDGGVKVA
ADAIQAAQAPHAFMGMTKMGQAAIFETRGNRDCHVILRGGKAPNYGAADVQAACDLLEKAGQRAQVMIDL
SHANSSKQHARQITVAAEVARQIAAGDARITGVMIESHLEEGRQDIVPGQALRHGVSVTDACISFAQTVP
VLEQLAAAVRARRAAAS
>gi|319760758|ref|YP_004124695.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MTDISAIELMERQTQEEALAHAHLLRVQQRIADLQQPLEQVLEQAARAACEITGAAGAVIALRGEAPLDV
QARAGEAPRPPPEAAEALWRRLEQLPGEAGDMSADHVQDTEEGAPARHFVAMPLRTGPLLAGMLQVIAAP
GQGFAPRHLGHLHVLAESLGAMVQLRRVHGQLCASERQYRSLFAEHPQPMWVCERDSLRLLLANHAMARQ
YGYDAHELPGMDMRMLWAPEHRDEADSAMTMCSDERAARSPALAPTVWHHMRKDGTRIDMEVFVGDTEFD
GRPAWQILANDITERYRIEEELARLNRAKRLRSACSETLVRATSESDLLHAVCRAAVEIGGYRMGWVGMA
RNDSRKRIEVVAHAGAAREYLEHMQLSWSPQENGGQGPASVCLRSGRTVIVRDVQDSPALKGWTERMARL
GLHAVVCLPLRDARRTFGLLTLSAPQVLHVGPQETQLLEAMAADLAFGIQNLRARAEQQRLQAAMVKVAT
AVSAGTGGAFFERLAHHMADTLSAQVACVVRLQAPVQGEPLQAVTLSHVCGGVAQPTGAYALDGTPSQEL
LRQGQLVIRDHLTQRYPRDAVLARAGVRSYVGRQLASSDGTPMGMVMVMFREPLAQVEFVCSALQIFAAR
ASAELQRQMDDARIRHQASLLDRARDAIIVRDLEHRITFWNEGAERMYGWSREEALGRSMASLLHHDPED
FLHATAQVLQHGDWSGEIVQRSRNGRSIEVEGRWTLVRNDQGEPESILAIDSDIGPRKSHEREIQRLAFF
DPLTGLPNRAQFMQRMGHALATARRQHQGGALLFIDLDNFKTLNDTLGHDQGDRLLQLVAQRLSTCVRSV
DTVARLGGDEFVVLLEQLTAHAATLAEHANKVGEKILNVLCVPYALAGHQYRSTPSIGIALFDDTPTSMG
DLLKQADLAMYQAKNAGRSTLRFFDPGMQRAVDERATLEADLRNALSQQEFTLHYQPQVDSRGGILGVEA
LLRWTHPQRGMVSPAQFIPVAEETGLILPLGRWVLHKACTLLAAWQKFPGLAHLTMAVNVSSRQFRDPGF
VGDVARVLAVTGAPSAQLKLELTESLLVEDMVSTIATMEALRAHGVGFSLDDFGTGYSSLAYLKRMPLEQ
LKIDRSFVRDLLADENNAAIVRTIVALAASLGLSVIAEGVETDEQRNWLTRAGCTVYQGYFFNRPLSSDR
LDGLLRSYLGPPGGLD
>gi|319760759|ref|YP_004124696.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MARTRQIDFDEGADSRRFVTALARGLDVLACFHADEKWLANAEIAARTGLPKPTVVRLAYTLCVLGYLRH
SRESGKYALGDSLAALGITMVSNLKLRRIARPYMQDLADRYDISVSLGIRNGLSVLYVENCRSGAPLSLG
LDLGSRIPVAETAMGHALLAVMEPRERERLLAEVRQAEPARWPRLREAIEAGCAHWQARGFTVVVRDWQT
DIAGVGAAIRQPDGRVITFNAGGSASKFPRELLEQEIGPQLARMVKGLESFVRSDDA
>gi|319760760|ref|YP_004124697.1| hypothetical protein Alide_0022 [Alicycliphilus denitrificans BC]
MTRPLFSRRTLALLLAAGFAAGPALAQADRFPNRPIKVLIGFTAGGSTDVPFRVLAENASKILGQPVIIE
NKPGAGGVLPAQMMQNTPADGYTLAQIPLPVFRLPYTQKINWDPATDLQYVIGLAGYAFGLVVPADSPIK
SMQDYIAYAKTHPGKLNYGTPGALTTLHLTMENIAMQAGVTLNHIPFKGNSESLQAVLGGHVMSVADTPG
WAPYVEQGKLRLLSTWGDKRSAKFPNTPTLKESGINLVQTSPFGLAAPKGTDPKVVQVLHDAFKKAMEMP
NYKESLAKFDMDTYYMDSATYRQYALDTMKTEKVIIDKLGLGK
>gi|319760761|ref|YP_004124698.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDFALNEEQQMLQASARRFLADHHPLARARRALPWSDGAQQRLWKEMAAMGWMALLLPEAHGGLELGLTE
ASLVAEEAGRQLLNLPWASSAVLLALWFKAAPNDAPSVLRDAAQAATAGTRALHCVADTDAWWDHAGQCS
DIVVVRGWHDGAAPLQIALVDAAQVAAAPALDPTLRQGAAARMPLQWHTLDVPARQRMHARAAHRLMLAA
ELVGVGQAALDMASAHAKERVQFGKPIGSYQALKHQLANAWMGVDNARLAVLYATAALDGGLPDARFACA
VAEYTAIDGALQSTRTAIQVHGGMGFTWEHDAHLLLKRAQHLAARLGGASRALAQVETLTLP
>gi|319760762|ref|YP_004124699.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MQVGYPAEDEAFRLTLREWFETHYPRFKAGWPVQPDPNELAWRRAWEDYVCRAGWSGLGWPLEYGGKAWP
LTRQAIFHEEQARIGAPLGVNIIGHGILAPTLIHFASAAQKARYLPGILANRDIWCQGYSEPGAGSDLAA
LATRAERRGDHYVLNGHKIWTSFAHIADHCFVLARTDPGAQRHKGISFLLVDMKSPGVRVEPIRQITGEA
DFNEVFFEDVRVPLDALVGEENGGWRLAMAAASFERGTYFIPRQVRFAQEVEALARLAAGISREGGESAL
QDPHLRREIARLAVDSHVLRLKGLRALTHALRGGPPGAEGSSAKLHWSEAHQKMMSIAMELLGERTLQGP
GPAGADPAAALWARDYLWTRAETILAGTSEVQRNILAEQMLGLPR
>gi|319760763|ref|YP_004124700.1| secreted protein [Alicycliphilus denitrificans BC]
MIKQLMAGIALAAAALCGPAQAQNYPSKPVTIVVPFAPGGATDIMARTLAERLNKRLGQPVIVENKPGAG
TMIASEHVARAQPDGHTVLLAASSLGIAPALYAKVNYDPVKDFTPISLVASVVHVLQVHPSIPVKNVAEL
IAWVKANPGKANYGSVGAGTSTHLESELFNTMAGVKMTHVPYKGSAPALMDLVGGNLQVMFDAWASSGPF
VKDGKTRLLAVTTAQRSKLLPDVPTVAESGLPGYEAMPWLGFVAPAGTPAAAVNRFHAELMEVLKEPEVQ
DKFRALGLDIIGNTPQQFADFIKRDIVKWAKVVKDSGAKAD
>gi|319760764|ref|YP_004124701.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp [Alicycliphilus denitrificans BC]
MTTHRLEPLLNPASIAIVGASSNPARIGGMPLAHLTRFGYAGRIYPINPKYEEVFGLRCWRDIEALPAAP
DLAVLAIAAQDVLPMLRRCAAKGVRAAIVYAAGFAEAGAQGAALQAELEAFVAGTDMVVAGPNAMGFANL
NSQAHTSFASVFNTAPMQQGPGSVSLLTQSGNVCAAVYAIARRLGVDFSHFINTGNEACVDFAQYLEYLA
QDAATQVCVGYMEELRDGPRFIAAAEEFARRDKLLVLYKAGETDKGAQAVRSHTSALAGDQAIYRAAFRQ
LDIIQSHDFVQMAQLAHLAGYRHRRAGRRVAIITISGALGAILADKFIGAGLDVPTLPQALQDQLRAGIP
DYGMVSNPVDVTGNVVNDPGFVRTAMQALAQSDAVDTVLVYAPGYLLDRMADDLCAVSRQYPKLFVAIDT
GAATAREQLRAGGVPVFEDIGVATSALAPFLLWQERRRRNRWMAVRRQSAPARAALPDSLDEYRTKRLLA
QHGVPAAPERVAATADEAAAAADAIGYPVVIKVLSPDIAHKTEAGGVRLRLADAAQVRQAFGEVLASCRR
HDPRARIEGILVCRMESGVAELIVGATRDPVFGMTLTVGLGGVLTELYQDVSHRVLPVDEAMAREMLGEL
KAFPLLAGYRGRPPGDVDAACAAIAAFSRAVLALGDQVAEVEVNPLLVKEAGQGACMLDALAIPSGQ
>gi|319760765|ref|YP_004124702.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MAFDTLEIENHGAVRRILLAREAQRNAQSQQMLDELMTALDDARHDDGVHAVVIGGKGAHFSAGHDLKQA
QAERSSFTVEERWAYEELRYFDYSLRIWDFPKPTIAQVQGACVAGGFMIANMCDLVVAGESAYFSDPVGH
TLGAAATEVLIHPWVMGARKAKELLFTGGRLSASEAHAIGMVNRVVSDAGLGESTLALAQQIAKAPPFGL
RLIKRSINRTLDAQGLRTALAAHFDTHQLSHLSEGFLTARDRGLANAIQKNREASA
>gi|319760766|ref|YP_004124703.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MDTPQGTAGAQSLRRALQLLRLLAQHQEDGIRLTEVMAASGLERSTAHRLLSCLVEEQFAERDPGSKAYR
LGLDAMQLGFASMRRVPLVDHCRPLMQRLARMSGDTVFLVIRQGDYCLCLHREEGHFPVKVFTTDVGGRR
LLGLGAGGLALMAQLSDAEVERIFDRHVEEYTQACFTRERLQQAVRRTRAAGYADIVDTLTVGVSGVGAT
FAASPGTLAAISFGAITPRLPPERKREMARLLMDQLVSNQAGGA
>gi|319760767|ref|YP_004124704.1| lipid a 3-o-deacylase-related protein [Alicycliphilus denitrificans BC]
MQPLVSPGLLCLSGAGRHGRRPLLSATAACLLCAIPPAFAQQAAHSPSVYLQASRAQHGTDAVTLGATLP
FGTWSMPLWGGELRGHWDMYLSRWSFDGIAGHDSTLVLGVKPTLRLRPDQGRSAWFWEAGVGGTLANHRY
RTAEREFSTRFNFASYLGVGINLGARRQHELLLSVEHLSNASIKKPNPGLNFVHLRYALHF
>gi|319760768|ref|YP_004124705.1| hypothetical protein Alide_0030 [Alicycliphilus denitrificans BC]
MTRFKITQRLACTALAAALAGMAIPSMAQPAPGAGPTAEQAQRQGPRAMTPEQRQQFMLQRAEAFKQKLQ
LTPAQEPAWNTFMQSMRPDAGSRKAWLEMKDMDKLTTPERIDRMRAIRAQRAAEMDRRGDAVKAFYATLT
PAQQKTFDAEGTRMYGRRGAQWDRHMGDHKGDWRGPRNGMHRHGPGPMPAPGAPAAQ
>gi|319760769|ref|YP_004124706.1| exonuclease rdgc [Alicycliphilus denitrificans BC]
MFKNIIVYRIAPEWHAELTQLEEALAKAPFQECGATQEKSSGWVPPRGEAHGLLAESVGGQWILRFMTES
KMLPGTVLARKVKEKAAQIEQQTGRKPGKKETRELKDEAKLDLLPMAFTKQGSTWVWVDCEARLLVLDTG
VQGRADEIVTALVEALPGLSVALVDTQTSPQAAMAHWLKEQEPPAGFSIDRECELKAADESKAVVRYARH
PLDIEEVQAHIQAGKLPTKLAMTWDDRVSFVLTEGLQLKKLAFLDTVFEGQPQDDGGFDADVAIATGELS
KLIPDLIEALGGEGRTELGSPAQPPQDDGGAPF
>gi|319760770|ref|YP_004124707.1| nucleoside recognition domain protein [Alicycliphilus denitrificans BC]
MALNRVWTAFFLIAFATAAVRWLLGEAGIFQALLSAMFDGARAGFEISLGLAGIMALWLGLMRVGEQAGM
VELLARLAGPLLRRLFPGVPAGHPAQGAMTLNISANLLGLDNAATPLGLKAMQELQTLNREPEGQASNAQ
IMFVVMNTAGLTLIPTSVIAIRQSVALKQGLGAGFNAADIFLPTLLVTFASLLAGVLSVAVAQRLPLWRA
RLLLPLLAVGSLLAAAVAALSRLPAERAAQVAGTTGAAVILGVVALFLLAGAWRRVNIYDAFIDGAKEGF
GVAVQIIPYLIAILVAIGVFRAAGCMDALLAALGAGVAALGWNTDFLPALPVGLMKVLSGAGARGLMIDV
LQTHGVDSFVGRLAAIIQGSTETTFYVLAVYFGSVGVKHTRHALACALLADAVGLIAAIGVGYAMLR
>gi|319760771|ref|YP_004124708.1| hypothetical protein Alide_0033 [Alicycliphilus denitrificans BC]
MTDSALIPLPDHLAVDPRSPHHVAAVFQQQADIGIRFNGKERFDVEEYCVSEGWIKVPAGKTLDRRGRPL
LITLKGSVEAFYK
>gi|319760772|ref|YP_004124709.1| hypothetical protein Alide_0034 [Alicycliphilus denitrificans BC]
MNFLLRSAAALLCSLFVGGAATAKPQVATLIVMPQDLRQNPQIVSDLQRRGINHATVYLTWADVEAQPGH
FDFSAYDPYFDQLTQGGLSLVVVLDMGGRAYFDGTGKHFPGRTTVPEWLYRQVPDGFMKNFSGQSTPQPD
FMNPTVRQFSAQFVRNAVAHLSQRYPGKVTAYSIGLQEEHEIKYGQTGYQWRDYADAAQAAFRQQTGAPL
PVINYTSDIALGLPRTEPLLHAHKQFREANLKEATCFYADAIRSQGGRAMSYFGELFTAHDGIYATSVAE
QLADCLDIAVIDYNFYDGYSLSPDARVLPMLANYMASVGYKQIMVGAYAEQWERVKKSTELLPVISRTLS
TALAQPNVIGYEVGGLQRQLDTHLTGTVDLDKLQALRVQPPVPATASTGKKLTVGILASTSNYYVWHGDR
SGGVNVHREALLEAYNLLSTQPGFDVHVIGEKNLQEDDLLQRLNAIVVPHQAALPASIKQQLKVYWKKGG
TLVQDMRLGEFDENGKPVYDWMHEVFGIENITWRPRGGIFLTDDGQILRLKPARKLYTGYAAMTPRPGYR
LLATDILNKRQGIMVRGERTLVFGFTPQLVEDATQAMWQQIFVREIANAVRCPTPTTCKTPPRSP
>gi|319760773|ref|YP_004124710.1| cu(i)-responsive transcriptional regulator [Alicycliphilus denitrificans BC]
MSRQIAAPAQDWPVPIGTAAERAGVSARMVRHYESLGLLTGVARTSNGYRQYTEADVHTLRFIRRARDLG
FSMEEIAALLGLWQDKARASSQVKQIAQKHIASLSERIAAMQAMQRSLQALVGCCHGDDRPDCPILDDLA
GPGAH
>gi|319760774|ref|YP_004124711.1| heavy metal transport/detoxification protein [Alicycliphilus denitrificans BC]
MQYTFQVQGMTCGHCERAVVHAVRQVDTDAIVKVDLATGQVAVESDQPREVLAAAIQEEGYKVAA
>gi|319760775|ref|YP_004124712.1| heavy metal translocating p-type atpase [Alicycliphilus denitrificans BC]
MNSASLRTADAPDTLDLGVGGMTCASCVGRVERALRKVPGVRDATVNLATERAHIVVDAAAAAGMDAVLR
RAVRNAGYEPRSVAEQDADAAAEQSPWAGFTPVAIGLLLSAPLVLPMFGDLFGRHWMLPAWAQFLLATPV
QFILGARFYKAGWHAAKALTGNMDLLVALGTSAGYGLSLWLWWTAAPGHAPHLYFEASAVVVTLVLLGKW
LEARAKRQTTAAIRALHALRPEVAHLLVRDGEVDVPIAEVMAGDRLVVRPGERIPVDGLVQEGHTQVDES
MLTGEPLPVVREAGGTLTGGSINGDGRIVMQVTAVGGETVLARIIRLVEDAQAAKAPIQRLVDQVSAVFV
PAVIAIALVTLAGWLWAGVGLETALIRAVAVLVIACPCALGLATPAAIMAGTGVAAKHGILIKDAEALEV
AHRVGTVAFDKTGTLTVGRPRLTAFHAHPESDEPALLSAVAAVQSGSEHPLARAVVAAAQERGLALAQPE
GVRAVPGRGTEGEVAGRSYLVGSLRWMQELGVDLGPLAGQAAALQGQGATVSAVAERVTQGLAARALLAF
GDEPKPGAREALERLKARGVRCVMISGDNRGAAEAMARRLGLDPAAGEVMAEVLPGDKAAAVAALKVGGK
VVAMVGDGVNDAPALAAADVGMAMGNGTDVAMHAAGITLMRGEPRLVAAALDVSHRTVAKIRQNLFWAFA
YNVAGIPLAALGYLNPVVAGAAMALSSVSVMTNALLLKRWRAE
>gi|319760776|ref|YP_004124713.1| chemotaxis sensory transducer [Alicycliphilus denitrificans BC]
MTMYALMRWFSIRMRMIGAIGVVLTLLFMLGGAGMLGMFRLHGLSQDFIAQPHAAVRLLGELRGEMGQIR
QAEKDMIIHYERPEAVRAAHTQWLTALDRAKAVATRIDGLNLEQEQALARDIAKHLDTYREQFAHVARQL
EEGGYDTATIANRMSTKAVAQFVVAAEKLQALDKALGAEVDGAIARQGSIAGQTQWLFGLAVLITVAVVV
PFTLLNMVSICRPLEAARALAQSIAGGNLAQRIEVDGRDEVADLQRALLDMQGGLGALVSQVRDASGNIA
TASQEIAMGNQDLSARTEQTASNAQEAVAALSQLTATVQQTASSSQVANQLVASASGTATRGGQVVQQAV
SSMHEISASSRKIGDIIGLIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAAAASEIK
GLIQSSVQAVEGGVRHVEDAGKAMQEIVVSVQRVTDMIGEIHSAATEQAAGIGEVNASVGEIDRMTQQNA
ALVEESAAAAESLREQAARLSQVVQQFQLADGQQAAARAAAPARAALESDPALPRLGVA
>gi|319760777|ref|YP_004124714.1| heavy metal efflux pump, czca family [Alicycliphilus denitrificans BC]
MKRLIHYALHQPLFVVLGTLLFAMAGVIAFKNLSVEAFPDVTDTQVTIIALYPGRAAEEVEKQVTLPIEV
ALSGLPNAIRVFSHTQFGLSFTVVTYDDNASVHIVRQQVGERLRSVDLPPGVEAEIAPNATPVGEIMRYR
LRGDGYSTTELRSTEDWVVERALRQVPGVADVVAMGGSIKQYEVQPDLDKLRAYKLTFQNLLDALGRGNA
NAGGSYVAQGTQQYAIRGIGLLQSSEDIGRIVVAAHGGTPVLIRDVAQVRVGAVPRLGTVGQDDDDDVVT
GIVVMRKGENPSVVLKDVKAKIADLNARSLPPGMQIVPFYDRTWLMEKTLTTVFRNLVEGALLVSLVLYI
FLSNLRASLAVVVVIPLSLLATFMGLKFMGVPANLLSLGAMDFGIIVDGAVIVIENIMHRLAERGEDMDD
RDRRETIIEAASEVGRPTLFSMLIIIAAHIPIFALQRHEGRIFQPMALSVTTALVGSLIFSLTLVPLLAY
WMLRRKLPHGDNRVVVSAKRLYGPVLDWALARRRTVVVISLAMFAVALAAASRLGSEFLPELDEGTIWVN
VRLPASVSNDEAARMLRQVRQALRTVPEVRTTISKAGQPEDGTDPKTISMAEVFVDVKPADQWRAGLTHK
QLIEEMDRAVSAIPGLEPAFSQPIRDNVLESISQIDGQIVIKVSGDDLGELKRITQGIEREIKQVPGVYR
AEIDRLGDLPQLVIDIDRDRAARYGLNVGDIQDVIEAALAGKATTSLWEGERKFAVAVRLPEDRRAIASL
PGTPIATPDGGYTTLGAVASIRETTGAMNIARENGSRTMAIGIFIKDRDMGSVVKDMQERVRARIQLPPS
YRVTWSGEFENQERAMKRLSVVVPISLLLIFVLLFDAFKSFKTASLILVNVPLALIGGFIALWVLDIPLS
VSAAIGFIALSGQAVLNGVVMLSVYQQLQAGGMGVLEAVRQGSMQRLRTVLMTALLAMLGLLPMALSHEI
GAETQRPLAIVVIGGLVTATLLTLVVLPALYVAWFAPRRNGPAPEAPVAIA
>gi|319760778|ref|YP_004124715.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus denitrificans BC]
MVHSISSRVRASRTTRRPGRGLLALALALALCAAAVLQGCHKAPTEPAAPEAAPPILQSGQLRFPPGHPQ
LALLAVTEVQPARELVVDLPARLVWNEERTQRVYPAFAGRVSAIRADLGQNVKAGAPLALLASPDFGQAQ
ADTAKARADQALAQQALARQRELFEAGVVARKDLEQAEAEAARARAEAARAAARTSLYGGGGAVDQQLAI
TAGMGGVVVERNLNPGQEVRPDQSGPGTPALFVVTDPSSLWVLIDARESDLASLRPGDAFALQVPAYPGE
TFTGRVTATADAIDPVARTLKVRGLVPNADRRLKAEMLATARVSESRSTGFVVPAAALTLNGTTHMVYVQ
RESGVFEPRTVVLGHEGPKNVEVVQGLSAGEKVVTQNVLLLARQFRLAQEASSTGSEAKAQPAKETP
>gi|319760779|ref|YP_004124716.1| outer membrane efflux protein [Alicycliphilus denitrificans BC]
MGQAPAGWAQTPPAASGTPTLTLAQALAAARDNSDVALARHALAGARADVLAADHAPAPVLSTKAASIDL
QNGVGGGNVVTRKRIDKSIGIDWTWERGDKRALRTLAAQRALDAAQSDVQDMQTQQLQAALSAYYDLLAA
QERLRETREIERGMAELDRVANLRLKAGDLARQDAARTRIESERARSDSELAELARTQAAVALAQLTARG
PGLQACACDWPAQVAGPAPGGDLLTWAESRADVRAALARVQAAQAELDSAMALRKADVTIGASYDHYPGT
SNRLVELRAQIPLQWGYRFEGEIGRAQAMLSAAQEALDKTRRLALLDLQSLQQQAASAAQRAAGYENGIL
PRAREVAQSAELAYAKGAIPLTDLLDARRTLRATALEALAARADYAKAQGNWLLRTEPQLLLP
>gi|319760780|ref|YP_004124717.1| response regulator receiver [Alicycliphilus denitrificans BC]
MRILIVEDDSVLRGVMQRSLADAGHRVDVAASVAEAHHFWCVQPFDAVLLDLNLPLDGVDEGAGGAQLGS
GLAVLRAARARGDRTPVLVLTARDRTHERIAGLDAGADDYLGKPYDLAEVEARLRALVRRSRGTQDRTVA
GALVLDRHVRRFTLHGLPLELPAREFEVLWELMTPPGRVVNKRTLSEKLSDFDETLGDNALEAFISRLRK
KLAGSGAGIRTLRGLGYMLEAQAAPPADGMP
>gi|319760781|ref|YP_004124718.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MSTPPQALPAPPPSLRTRLLRHVLGPLALTWLVGTVASALLANSFTQRAFDRSLLDDAYAIAANVREEPD
GLEFPLSSREVKAVLFDQVETVYFAVLREDGTLLAGNASLPAPPPHEGQVYRFSDMRFHGRALRAVRLQL
TTPAPFEVITAQTVHSRSVMLRSALLYSLASQVLLLVVLALWLGRAIRQELRPLAMFQQALDQRDARDLA
PMRVEASTRDLQRLGRAVNDLLARVAQGVQAQREFAGNVAHELRTPLAGIRALASYGLAQKEPAVWREQL
TGIVQSEARASHLVDQLLALALADEARGSMPLRPVPLDQLVRDTVLRFLPRADAAGVDLGALGLEQAVTM
QGQPLLIEGVLSNLIDNALRYGVPPAGEAPQVTVELAREDGSVVLSVLDNGPGIAPVQRQQLQQRWVQGR
DGERLGQGAGLGLGIVARYAELLGARLEFTPGPQGRGLCARLVFAPLASTPGGEN
>gi|319760782|ref|YP_004124719.1| NADH:flavin oxidoreductase/NADH oxidase [Alicycliphilus denitrificans BC]
MTSLFDPIQAGDLHLANRIAMAPLTRNRSPQAVPRNITATYYAQRASAGLLITEGTAISAQGQGYSDVPG
LYGSDQLDGWKKVTQAVHARGGKIVTQLWHVGRVSHSLLQPGRAAPVAPSAVQANAKTYVVDPETGRGEF
MHTCTPRALTAEELPDIVHTYAAAARNAVRSAGFDGVEIHGANGYLLDQFLKDGANRRTDDYGGGIARRA
RLMLEVTRAVADAIGGGRVGLRLSPVTPANDIHDSNPQPLFEHLARQLAPLSLAYIHVIEGATGGPREVE
GRPFDYAAFKAAYRDAGGRGAWMVNNGYDRDMALQAVASGHADMVAFGRAFISNPDLVERLRRNAPLNEW
DRPTFYGGGEKGYIDYPAMAD
>gi|319760783|ref|YP_004124720.1| glutathione s-transferase domain protein [Alicycliphilus denitrificans BC]
MKLYYSPGACSLSPHIVLHEAGLAYEPVLASTKTHKLADGTDFYSINPLGYVPVLELDDGTRLREGPAIV
QYLADQAPQKNLAPAPGTLARYRLQEWLSFIGTEVHKGFGPLFAPGTPEEYKPQLKQRLLSRLQWVDGEL
AGKQYLMGDHFTVADAYLFTVTNWAQFVGLDISQLKNLAAYRERIGARPAVQAAMKAEGLLK
>gi|319760784|ref|YP_004124721.1| hypothetical protein Alide_0046 [Alicycliphilus denitrificans BC]
MDYRPGCGACCSAPSISSPIPGRPGGKPAGVRCVQLDDDARCRIFGHPGRPPVCASLQPHPAMCGGSRQE
AESILSRLERLTQPGAPYTSAAKAMRKA
>gi|319760785|ref|YP_004124722.1| nadph-dependent fmn reductase [Alicycliphilus denitrificans BC]
MKLLVFAGSTRQQSFNRRLARIAARMGRDAGAEVTLLELSDLDIPMYNADLEARGTPPDVIRLKEILDAH
PAWIICSPEYNGSYTGLLKNTIDWASSPVAGHPVWTDVTRPFAGKVVGVLSASNGALGGLRSQSHLAPLL
VNLGCWLAPRNYALARAASAFDAGDDLADEAQRQQVRAVVDQVLWAAQRLCA
>gi|319760786|ref|YP_004124723.1| glucose inhibited division protein a [Alicycliphilus denitrificans BC]
MLYPQEFDVIVVGGGHAGTEAALAAARMGCRTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAM
ALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLFQQAVDDLMVEGDRVAGAVT
QIGLRFRARAVVLTAGTFLDGRIHVGLNNYAAGRAGDPPAVSLSARLKELKLPQGRLKTGTPPRIDGRSI
DFSQCEEQPGDGMPGGVNEGVLPVFSFMGSTVMHPRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGV
GPRYCPSVEDKINRFADKESHQIFLEPEGLTTHEFYPNGISTSLPFDIQYALVRSMRGLENAHILRPGYA
IEYDYFDPRSLKSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGLNAALQCRGEAPWLPRRDEAYLGV
LVDDLVTKGVTEPYRMFTSRAEFRLQLREDNADMRLTEAGRRMGLVDDARWDAFAAKRDAVSRETERLKS
TWVNPRILAAAEAERVLGKAIDHEYNLFDLLRRPDVDYARLMSLDGGKYASGDVSRETLGALSEPVIEQV
EIAAKYAGYIDRQKDEVQRAAHYEQLRLPPELDYMQVSALSIEVRQKLQKHRPETLGQASRISGVTPAAI
SLLLVHLKKGGFKGFAQPAPTGEGHVVSA
>gi|319760787|ref|YP_004124724.1| hypothetical protein Alide_0049 [Alicycliphilus denitrificans BC]
MSFPLEERRALLACKGVGAAVVARLEQMGYGSLAHLAKANTPDILAAGARLTGSSCWKNSSQARAAIDAA
LALARSRHG
>gi|319760788|ref|YP_004124725.1| methyltransferase gidb [Alicycliphilus denitrificans BC]
MVDAAPLRQGVQALGLDLTEEQIARLLDFLALLQKWNKVYNLTAVRDPQEMLTHHLLDSLAAVAPLRRHL
AQQGGAGRRLLDVGSGGGLPGVVFAICCPDLDVSCVDTVAKKAAFIQQAAAALGLRNLHGIHARVETLAG
PFDVVSCRAFASLPDFVNWSRQVLAPHAVWLAMKGRHPQDEIAALPVGVQVFHVEQLAVPGLDAERCIVW
MRPVA
>gi|319760789|ref|YP_004124726.1| lysine exporter protein (lyse/ygga) [Alicycliphilus denitrificans BC]
MFGIADYGAFVAAIVLFLAIPGPGNLALITSTGKGGVRAGLAACLGVIAADQVLMWAAVAGVAGLLAAYP
AAFHAVQWLGAVYLGWMGYKMLTARPGDAPVLRIEPRHYFRQGAVITLLNPKAIVFYMAFFPLFVNPATH
RGLATFAAMAATIAALTFLYSLVVVLLTHHLAERMRANPTVVRVLEKTAGTFLIGFGIKLAISK
>gi|319760790|ref|YP_004124727.1| cobyrinic acid ac-diamide synthase [Alicycliphilus denitrificans BC]
MAKIFCIANQKGGVGKTTTSVNLAAGLAKIGQRVLLVDLDPQGNATMGSGVDKRQLALSVYDVLLESSSI
KEAAVPAEQCGYHVLGANRELAGAEVELVALEHRERRLKAALAEVDQDYDFVLIDCPPSLSMLTLNGLCS
AHGVIVPMQCEYFALEGLTDLVNTIKQVHANLNRDLQIIGLLRVMFDPRITLQSQVSAQLKDHFGDKVFD
TVIPRNVRLAEAPSYGLPGVVFDPVAKGSQAFVDFAREMVQRIQRM
>gi|319760791|ref|YP_004124728.1| hypothetical protein Alide_0053 [Alicycliphilus denitrificans BC]
MHPFQVLLLPGWQDSGPGHWQTEWERLHGYRRVQQHDWTRPLRGDWSARLEEVVADAPGEVLLAAHSLGC
ILAAWWAAHTRHARKVHGALLVAPGDVERPDLAAQIRGWAPIARRPLPFPAVLAGSRDDPYCAFERARAM
AQDWGARFVDLGARGHVNAESGLGDWPEGHALLQTLINKD
>gi|319760792|ref|YP_004124729.1| parb-like partition protein [Alicycliphilus denitrificans BC]
MVTKKPKGLGRGLEALLGPKVADKAEQAQAEAQGLPSTLALDQLVPGVYQPRTRMDEGALYELAESIRAQ
GVMQPILVRRLGNGENVGKYEIIAGERRFRASRLAGLNEVPVLVRDVPDEAAAAMALIENIQREDLNPLE
EAQGLQRLIREFGLTHEQAAQAVGRSRSAASNLLRLLNLAEPVQTMLMAGDIDMGHARALLALDRATQIT
AGNQIAARKLSVREAEGLVKKLGAEFNLTPQKPKKDKSRDMKRIEEELSDLLMAEVEVRVKKRVKRGSRT
EEMGELAIAFGSLEALNGLIERLRG
>gi|319760793|ref|YP_004124730.1| methyltransferase type 12 [Alicycliphilus denitrificans BC]
MRLSWPLPALLAWGVAWLLHAVLQPRLGTLASLLGATGVGVLASLWGQNWWRRALIALGFPLSLALTGAA
GLPAWAWLLPLAVLLLVYPLNAWRDAPLFPTPRGALHGLDALAPLPSGAAVLDAGCGLGDGLLALRAAYP
RARLHGLEWSWPLALLCRLRCPWAHVRRGDIWAAGWGDYQLVYVFQRPESMARAAAKALAEMAPGSWLVS
LAFEVPGLAACARLPGFAGQGVWIYRMGASAAAPRGATKECEASADVTL
>gi|319760794|ref|YP_004124731.1| peptidoglycan-binding domain 1 protein [Alicycliphilus denitrificans BC]
MSRKTLSLLAAACTVVALAGCETTNMKMGSQDAKTVATGAAAGGSAANESSQLERCQSPLGTVSLVENQD
AGWYTILRNEYKLPPTANLLRLLIQQSNCFVVVERGAAGMRAMDRERQLMGSGEMRGGSNFGKGQMVASD
YGLSPEIIFSNNDAGGVGGALGGLIGGGRGRALAAIGGSLKTREASAMLTLVDNRSGVQVAASEGSASKS
DFAGFGGIFGGSAGGGLGGYQNTAQGKVITAAFMDAYNQMVVALRNYKAQSVQGQGLGGGGKLGVDGGAA
PSQTKAGAAMSVREAQERLNALGYNVGTPDGSAGPKTARALREFQQQQGLPVTGRLDAATAGALSR
>gi|319760795|ref|YP_004124732.1| helix-turn-helix, arac domain protein [Alicycliphilus denitrificans BC]
MPIHAAPPPGHADAQAAPAHAPRAARVLSYVESLTPHLFVPSRARPVRAKHRELRADTQVRPHSHPWAQV
AISTTGVLRLTVPDGAYIVPPSRALWIPPGVEHAVTMVEDADLRTLYFHQPPGRCGPGVARAQEEPWRQC
RVLEVSDLLRALVREMPSEPDDAPPLPPELLHRERHLSALILDELRRASSVRLGVDLPRDKRLRHLCEAV
IADPTRHETLADWARDTGASPRTVARLFRQELSSTFTQWRQQVILARAVALAAGRRPINQIAAELGYNSP
SAFSAMVRRTVGLAPGRFLGA
>gi|319760796|ref|YP_004124733.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MPMTTAATPSLRQDVRTIGLIGLAHGSSHFFHMLLPPLFPFLIKDFGYSYSELGLLLSVFFVVSGTGQAL
SGFLVDKVGARPVLFAALSSFAAAGLVAGSAGGYAGLVLAAVLAGLGNAPFHPVDFTILNKRVSPQRLGH
GFSVHGISGNLGWATAPVFMAGIATATGSWRMACLGGAALALLVLAIMVWNRDALDDRQGAWAHQAAKGA
VGAAAVQEHPMAFLRLPAVWLCFSFFFWSTCSLSAIQSFAAPSLQRMYDMPLSLTTMVVTGYMLCGAMGM
VLGGFLVGRVERLEKTISVCLLASATLLTLVGLGVLPGMVALAVASLAGMGIGIAGPSRDMLIKRAAPPG
ATGRVYGTVYSGLDLGFSLAAPVFGAMLDAQMNAGIFYGSALALVLSVVSAGFVGVGVAARRMQAVAQSA
A
>gi|319760797|ref|YP_004124734.1| mscs mechanosensitive ion channel [Alicycliphilus denitrificans BC]
MNTTDIWHFLSTQGTDFAIKLATAIAAWIIGRWLISLAVSLMGKLLQRGGKIDTTLAHYLKSITGVLLNI
ILILAILDIFGVKTTSFAALLAGAGLAIGAAWSGMLGNFAAGVFMQVLRPYKVGDFISAGGMVGTVTELG
LFATTLTTPDNVMTVVGNGKIFGDNIQNFSALPVRRVDCVAKVANSVSPLDAIARLKPVISAIPNVATEP
APDIEILEFTPEGPKLCVRPYTHTDHYWQVYFDTNKAIVETFGAAGYPVPETPMAYRNA
>gi|319760798|ref|YP_004124735.1| hypothetical protein Alide_0060 [Alicycliphilus denitrificans BC]
MAVPMSGPAATRHTVLQEKASNALCMGAISY
>gi|319760799|ref|YP_004124736.1| fad linked oxidase domain protein [Alicycliphilus denitrificans BC]
MNAPAHAAQLQPRIDPRPVPQALLDALSQRFGAQLSTAQAVREQHGRDEGSIQAPPPAAVVFAESTQDVQ
DAMRLAAQHEVPVIAYGAGSSLEGHLLAVQGGISIDVGRMNKVLSIDADDLTVTVQPGITRKALNEAIKD
TGLFFPIDPGADASIGGMAATRASGTNAVRYGTMRENVLALEVVTANGDVIRTGTRAKKSSAGYDLTRLM
VGSEGTLGIFTEVTVRLYPLPEAVSAAICSFPSIEAAVRTVIQTIQLGVPIARVELIDANSVRMVNAHSR
LALREEPMLLMEFHGSAASVQEQAETVQGIASEFGGQAFEWASTPEERTRLWTARHNAYFAAVQSRPGCK
AISTDTCVPISRLADCLLASVDEADASGIPYFLVGHVGDGNFHFGYLINPAVPEERERAEQLNHRLVARA
LSMGGTCTGEHGVGVHKMGFLVDETGAGAVDMMRAIKRALDPKNILNPGKIFAL
>gi|319760800|ref|YP_004124737.1| hypothetical protein Alide_0062 [Alicycliphilus denitrificans BC]
MASKRRIRRNACTGKYRYSSAAEAQAAIAGLHRRKGYQGFMQPYRCSFCNGYHFGHPPKPKKPSGWGHYR
>gi|319760801|ref|YP_004124738.1| phage virion morphogenesis protein [Alicycliphilus denitrificans BC]
MPQIIELPDRSGLDYLHALVERGQNLQPLLKEIGEDQAEETKQRFATATDPDGNAWAPNSALTLANYSAL
FARKKDGSLTKRSAEKLAGKKPGTGETRMLGTTINYQVHGDDAVGVGSPMVYAGTFHYGAKSGEFGFGMY
ATRNGSFPIPWGDIPARRFLGMSQTGRENVVSLVRSYFLEG
>gi|319760802|ref|YP_004124739.1| head morphogenesis protein spp1 gp7 [Alicycliphilus denitrificans BC]
MADLGEAARSTVEGARQQFQEQIDFLRRKLNLPSETWRDIQRAAHDRAFVVAGATKADLLHDLRKAVEKA
VEGESIADFRKRFSEAVAKHGWTGWTGEGSKAGEAWRTRVIYQTNLMTSYAAGRRAQLLDPDLVKRRPFW
RYVHNDSVTHPRPHHKRWGDMRLTLRHDHPFWDTHFPPNGWGCKCRVVAVAAPGEGDATTPPDGWDETDP
ATSSPVGIDEGWNYAPGARADDDLRSFVQDKLIEYPPAISTALSRDVNRYINAEQLVPDFVREVLQDRQR
SDPLWLGFVERPDWIAEVTGADTRGYTLLLPAEAPRHVQSSHGFDGAGQRPATPEDFAQVEAVFNDPDQM
RAGATSRHGNATLVATKAINGEVFRAVWEVLQGRRNRSLSLTSLVIKTSK
>gi|319760803|ref|YP_004124740.1| hypothetical protein Alide_0065 [Alicycliphilus denitrificans BC]
MKQGIYVTPTEFVSFGEAKRRTSTLGEEVATRARSMDVAGFSFLLPNPDPILKRQGKDMRVYRDLRSDAH
VGGCIRRRKASVKKLERRVVAGKAGARAVRRAEDLFSALNMDRVMNEVLDGVLYGWQPLELMWGYRAGAL
QPLDVVGKPGEWFTFDNEAQLRFRSREHPLHGEALEPRKFLLARQEASYANPYGFADLSMCFWPTVFKRG
GLKFWVTFTEKYGTPWLVGKQPRGTPGPEVEELLDKLEAMIQDAVAAIPDDSSIDVLEAGDKGASAELYK
ELLMFCRSEVSIALLGQNQSTEASSTHASAVAGLEVAEAIRDGDARMVEATFNQMLRWVTDLNEGENAPA
PTVELYEEESVNTKLAERDSNLKSAGVNFTTQYWMRAYKLEKGDIAEQAAPVAVPGAPGVEFAEGTGPTV
PAETLAALTAGASPVVELWLREMRRLVEAHRDPQRLQADLLEAFGDLPTGELAALMAAAFELAELQGRDR
AAQEAGHG
>gi|319760804|ref|YP_004124741.1| hypothetical protein Alide_0066 [Alicycliphilus denitrificans BC]
MSRATDYTNAAQQRILHLQLALFGDVVHGYPPSKLAELLRVPASAITRDLDNLRTIAPNEIETNLHQRIP
FIAEMKNVPYNQQLQVLFAIGDALPRKCGMVIDSRGNGSYVGEAAHDKYGSVVQRLMPTEGWYRDNMPPY
KAALEDGTILVPKHDGLLQGHRAIRLIRGVPRMPESTDKEIGHGDSTMACIYSHAAARMDWGPTHAASRP
RRSRLDVSMEGYYE
>gi|319760805|ref|YP_004124742.1| hypothetical protein Alide_0067 [Alicycliphilus denitrificans BC]
MDELDITYALSKQIPDMERGFTISTSYGDLVVEAHEAAAFVEAANLLMFQRLAALRGSKQS
>gi|319760806|ref|YP_004124743.1| hypothetical protein Alide_0068 [Alicycliphilus denitrificans BC]
MIRRDWKRLRASSLVHAMRLCKEYAQAKHNLSVERIADRMGATHDTLYKWLATGRMPAILIPAYELACGC
HYISDWLAASAGRLVVPMPTGRKAEGTELLDMNSSCAAALQLLTAFYQAPTEADTEATLAALRLHLEQVA
YHHHNVAQYATPELEF
>gi|319760807|ref|YP_004124744.1| hypothetical protein Alide_0069 [Alicycliphilus denitrificans BC]
MQTYRNWRVIWRCWRRRSQSQLGNPGSQSLQGRCCSRMLDHQQIADALGLARRQLRVTAICYPAAIRVIG
RTEVYRQIAEVRIDGKVKLTQPIGYAFPAGAVFSTALRQGDRFARVSRVYDQQSWDGVTWYDGLDPSKGA
ATATYDTTNYPIEVNNRGAITERWALRFRSGGQVFDFIGQHLGQIASGNVNEDFSPMNIAAGAPYMTIRA
GGWGSGWAAGNVLFPDTIGAEAPIDCVRCVQPGSPAGIDDRAWIVQRGDVGRDPESDF
>gi|319760808|ref|YP_004124745.1| hypothetical protein Alide_0070 [Alicycliphilus denitrificans BC]
MATYPVKYITNTMRGAPQISGQAGTLQAALRTFLLTGFGLTTALSVTVAGGIATASLNEGQTFAQGCVVL
VDGGTPAQINGEARVLTSSNSAITWATTAPDGPATGTITIKVAPVGGWEELFPGTPNKSVFRSIDPQASG
FCYRVDDSGTTQARVRGFESMTDIDTGTGPFPTDTQISGGGYTAKSYSEGATPVSYLLAADSRTVLIAIS
SYSSILATYTVAPIRGFGDMLPLAPDGDPYSAAISCNSNSGTASFGAFGFYRSGAASIYCPRPRGGIGSA
VRADTYPYVGNAATVSGADPKLGAFPSDVDGELKYCRQYIAAGENLTPRADVPGVLYIPQTGVGALIKSG
DTLQGSGALAGRTLRAVGANSSADAEPVGAWLIDVTGPWR
>gi|319760809|ref|YP_004124746.1| hypothetical protein Alide_0071 [Alicycliphilus denitrificans BC]
MAALAYIASFVGLAGAVTPSTAPPRFTAATAIGLLSNQGGRNWRFFGDTSGTVLNNNRVMVKPSATAPEV
PFAGARVRLHRLTDGYCAWEGISDAAGYYWPRGLEVGLLYYPVAIDLTGTHECDAAGPVIAVRAP
>gi|319760810|ref|YP_004124747.1| hypothetical protein Alide_0072 [Alicycliphilus denitrificans BC]
MRDLVLTQEARAARNAASIARADEGPGNSAIKLYTAQGGTLVAVRQLGKPCGSVREADGRMVLVPGAQND
LVLATGAANWGEWCAGDGVALYVGPVTDEHGMASDGAGGLVDTGDVGPWVLEGTRGTQLYEGGLVLLRSA
AIG
>gi|319760811|ref|YP_004124748.1| hypothetical protein Alide_0073 [Alicycliphilus denitrificans BC]
MADGRLTFLRPLDPDRGGRLVLGDAPEGVPPQQLTGLVFSRPASGSGKLTFGKWTEGGEQQIPDAGLSID
AGIAGEGSASVRLRAAALVVVDAGIAGEGAADVRFGWDANVSRGGLRAELQALWQQRARPIAAGLATAWQ
QAAPLRVGAAVRWQDAAPVRGSLAAHWQEAERLRAAVVARWQEGERLRAGVDLQWQEAVRLRAAVVARWQ
EGERRRSALDARWQETLRLRAALSTGWQQAGAARALLVSGWGHGRPVRVHLRTHWQEAMRPRAGVSRLPK
PPEPRPPCYDPARLGLLVLDTAFTGDGRLLFVCGSAGPTLPPAGIVVPARRSYVVINSIEIRRADDLAGD
PLPSESFNMQLDRQSWTWTFSAAFHASARDAVAPGVGGQPVELEVRINGQPFRLQAERIGRSRRFPEHLV
TASGRGLAAVLDAPVQTFSAALDRTAHQLMTDVLTVNGVGYGWAVDFQLSDWLVPGGIWMHQGTPISALS
EIAGAVGGYLQPHDTDAIVRVLPLWPEPWWRWDTLAPDIELPDGIAEITETEIIDMPAYDRIFVAGEAGG
IQADLTRTGLPGLVLKQPMAVHPLITTIGAAKQRATAELAESGRMLKHKMTLPVLPATGVIKPGTVLRYV
DDAQALRLGLVRATAISQQFPVLTQSLEIDSHA
>gi|319760812|ref|YP_004124749.1| hypothetical protein Alide_0074 [Alicycliphilus denitrificans BC]
MPNLYQQLRELLAPGRVQIGEVVAYTDGVATIDLPGAGQVRARGEAAVGGKVFVQDGVIQGPAPDLPVFV
DVI
>gi|319760813|ref|YP_004124750.1| d12 class n6 adenine-specific DNA methyltransferase [Alicycliphilus denitrificans BC]
MANPIVPWIGGKRRLVDLLLSRFPPHECYCEVFAGGAAVFFARNPASVEVLNDVNGDLVNLYRVVTHHLE
EFVRQFKWALTSRQVFKWLQETRPETLTDVQRAARFFYLQQQSFGGKVAGQTWGTATTAPAINLLRIEEN
LSTAHLRLAGGVYIEQLDWAACIDRYDRAHTLFYLDPPYWETEGYGVPFPWEQYVAMAAKLKAIKGKAVV
SINDHPAIRECFAGYDMEALKLDYTVGGGANRVERGELVIYSWDRLAEPAGLF
>gi|319760814|ref|YP_004124751.1| ATP/cobalamin adenosyltransferase [Alicycliphilus denitrificans BC]
MGNRLTQIATRTGDDGTTGLGDNTRVSKASGRPHAMGDVDELNSHIGLLLCEPMPQDVRELLIDVQHQLF
NLGGELCMPGYELLKDDALLQLDNALARYNAELPRLQEFILPAGTRAACQAHVCRTVARRAERAVVALQQ
AETMRAAPRQYLNRLSDLLFVLSRVLNRMDGGNEVYWKSERLARQADDATE
>gi|319760815|ref|YP_004124752.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MSIWKTPISLASVNAHTAHTAISHLGIEFLEVGDDFLRARVPVDERTRQPYGILHGGVSVVLAETLGSMG
AANACPPDHRVVGLDINANHIRATSSGWVTGTARPVHIGKSTQVWQIDMVNDEGQLTCVSRITMAVLQPR
>gi|319760816|ref|YP_004124753.1| succinate CoA transferase [Alicycliphilus denitrificans BC]
MSAAEAAALIPAGANVGMSGFTGSGHPKLVPQALATRIEAEHAAGRPFQVNVWTGASTAPELDGALARVG
GMRQRLPFQSDPVCRDRINAGEVDYLDIHLSHVAQQAWFGFLGPLHVAVIEVLGILPDGRLIPSAAVGNN
KTWLDIADKVILEVNSLPPAEMEGMHDIYYGTAIPPRRLPINLTQPIERIGEPYLRVDPAKVIAVVPTHH
GDRDTAFAQPDAVSNQIAAHIIDFLAHEVKVGRLPRNMLPLQSGVGNVANAVLAGLLDGPFDDLLGFTEV
LQDGMLELIKRGKMAAASATAISLSRPALQEFTDNIAFYRERIVLRPQEISNHPELVRRLGVIAMNAMIE
ADIYGNINSTHLMGSGMMNGIGGSGDFARNGYLSFFVTPSVAKGGAVSCIVPMVSHVDHTEHDTQIIVTE
QGLADLRGLSPRQRAQVIIDKCAHPDWRPLLQDYFDRARSQGAQHTPHLLGEALSWHQRCLETGSMRA
>gi|319760817|ref|YP_004124754.1| hypothetical protein Alide_0080 [Alicycliphilus denitrificans BC]
MPFTPLCPSCRQPADVRRFAATGGGTLELDLCFACQGMWFDPQENTRLAPAAVLQLFELLHDRRGDAHRP
LSDRLQCPRCATALVKGYDVAQGGRYVTYRCAARHGRFSTFGAFMVEKGFVRHLSKLEIEALARRVGTIT
CTSCGGAVDIRNDHACPYCRSALSLLDPQAVDKALARHGRAAQQSAAQADERSPDALADALIALERNRSR
EERERQRERLEGRQSDQFDLVAAGIEFVWSLLRR
>gi|319760818|ref|YP_004124755.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MDLISLEVLVAAIEEKSLSAAAERMHMVTSAASKRIAELERREATVLLRRHGRGVVPTPAGAMLYQRAKS
ILRQIAQARGALREYAASGVPHVRLAANASAIQQFLPSEIGAFSRREPAVRVDLTEAFSYDVPRLVADGD
ADVGIYHAAYPAPGVLSRPYRRDRVALVVPAGHPLEARGQLPLEDALEYDFLGYFPRHSLSEFLALAGNT
LTRPIRVRAQVSNPGARCAMVREGLGLAIVPLGIARNYARLLGLSILTLTDEWATRQLWVCARQPAQLPP
EAALLWHFFLEHSGEADSASS
>gi|319760819|ref|YP_004124756.1| hypothetical protein Alide_0082 [Alicycliphilus denitrificans BC]
MFGRANRRKFFQSTTAGAISAAAFGSALTPHWAWAQSPDGYPSRAIRVVVPFTPGGGTDVVGRALMEALS
RELGQAIIVDNKPGGGTVIGSDLVAKAPADGYTLLLTTSALAINDSLVPKLPYKTARDITEVGLICTGPN
VFVVRPESPYRSVADLIQAAKARPGRLTYGSSGNGSSVHLAAELFKLMAQVDITHVPYRGAGPAYTDLMG
GQIDFVVGTAGGVAKLVEAGKMRAIAVTSEKRTSAYKDIPTVAETLPGYAADVWYGIFAPAGTPPDVIAK
LNAALAKAANAPAYKQRLSNEGLTVAVNSPAEMTRFMRAEEARWRKVVVEGKVSVD
>gi|319760820|ref|YP_004124757.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MTTTSQRLAGKVAIIVGAGQQPGETVGNGRAVAERFAEEGARLLLVDIQPESLKDTEDKLRSMGAEVASV
LADITREDDCARIAAQCVATFGRIDVLHNNVGRSKGDKSTVELGADMWDEIMAMNLKGMFMTCKHVLPQM
IAQKEGSIINISSTSSLSARPTVAYKTSKGAVNTFTQHLAYENAAHGVRANAILPGLIDTPMAIERRARE
RGVSREIVRAEREAMVPMKRMGTAWDVAHAAVFLASDESRYVTGVLLPVDGGLVCKRG
>gi|319760821|ref|YP_004124758.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MNLRLQGSHVLVTGASRGIGKACVRAFLDEGATVSALARTQQTLEAMAAQMQAGDRLRVFCADLQDAAQA
QEAVRRIEAQGGPIQVLVNCAGAAKRTPFAQLQPADWHAGMQAKFYSYMHVLTPVVQRMAGRGAGAVVNV
VGAGGKRANPVHLAGGAANAALMLAGTGLAAAYAPSGVRINTINPGQVRTERLQAQRDAQAAAGGAPLAE
PPLGRPAEPEEIAALAVFLASPRASYVSGAVIAMDGVALPTVV
>gi|319760822|ref|YP_004124759.1| carboxymuconolactone decarboxylase [Alicycliphilus denitrificans BC]
MRIAPITPGTRPELAELEATITRQRGRVSPLYQVLLNSPAMAHGWEQMLTAVRRHNSLPDLDRELLIVRV
AVLNHARFEYEAHVPIALQAGASSQMIADVSGADAIGASVQGGLRALVELADAMTSRIDVPDALYAQAAA
YYTQQQMVDAMVTIGAYNMVSRFLEAVQIGH
>gi|319760823|ref|YP_004124760.1| uracil-xanthine permease [Alicycliphilus denitrificans BC]
MGMFQWNERPAEVLQGGGVIGPDERLPWGQTGLMGIQHVIAMFGSTVLAPILMGFDPNLAVFMSGIGTLI
FFLVTGGKVPSYLGSSFAFIGVVIAATAYAGKGANANIGVALGGIIACGAVYAAVGVVVHLVGTGWIERF
MPPVVTGAVVAVIGLNLAAIPIKNMAASNFDSWMQALTFVCVALVAVFTRGMVQRLLILVGLILASIAYA
LFTNGMGLGKPVDLSGVMAAPWFGVPQFHAPVFSAPAMLLIVPVVIILVAENLGHIKAVTAMTGKNLDQY
MGRAFIGDGVATMVSGVAGGTGVTTYAENIGVMAATRIYSTAVFLVAALIAVLLGFSPKFGALIQAIPLP
VMGGVSIVVFGLIAIAGAKIWVDNRVDFSQNKNLIVAAITLILGTGEFTLKFGDFALGGIGTATFGAIVL
YALLNRGR
>gi|319760824|ref|YP_004124761.1| methyltransferase fkbm family [Alicycliphilus denitrificans BC]
MKALIKALAHRAGLDVMSLAYSRDYIYDRFLPGALKGHGIQAVIDIGANIGGYGELLRRVGFAGDIHSFE
PCSQPFGELARKAAGDPRWHVYQKAASDRSGTAQIHTMVGSELNSFLSLRESSRKMTETGTEDVETVTLD
GLDLPIDWSRTFVKIDTQGHDVKVMSGGRNVLRQAALIQSEVSFLPIYQGMPAFDEAIASLKELGFDVIG
MFPVSRDSLGRVQEFDCLCVNRNLPR
>gi|319760825|ref|YP_004124762.1| ubiquinone biosynthesis hydroxylase, ubih/ubif/visc/coq6 family [Alicycliphilus denitrificans BC]
MPPQQTNTHSSSDVLIVGAGPAGLSLAASLAQAGMQVTVLEQQPASVLAAPPPDGREIALTHPSVATLQR
LGSWQRLAAHEVGLLREAQVHDGPVGRRGAMQLHAGGSGVDHLGWIVPNYALRRTAYEVAAQQPDVRIVT
EARVARVAVTPAHAELEYTDARQGGQGAERLQAPLLVAADSRFSATRRQLGIGAAMHDFGRTVIVCRLRH
ELPHHEVAHECFGYEQTLAILPLPNDPIDGAPMCSAVVTTGAAQAQQLMALPPEEYAARVQAQFQNRLGA
MRLVGERHAYPLVAVYAHRFAGPRCALLGDAAVGMHPVTAHGYNLGLAGVEGLTRAVAGAWARGADIGAA
SVLAPYAREHHRHAWPLYQGTNAIVRLYTDDRPLPRLLRQAVLAGSNRLPPLKGLIVSQLTGRRPAWPTA
AP
>gi|319760826|ref|YP_004124763.1| acetoacetyl-CoA synthase [Alicycliphilus denitrificans BC]
METDSPPPYVPQIRLYQDWLQARRGLRFDGYDALWRWSVTELDAFWQSVWDYFDLQSPTPHDAVLARNVM
PGARWFPGAQVNYARQVLRHVDAAHAAGQPALVARNERGQHRELSWPALRRQVAALALHLKAQGVGPGDR
VAAYLPNIPETIVAFLACASIGAVWSVCAPDMGTNAVLDRFRQIEPKVLFAVDGVSYGGRDHDRCAVLAE
LRAQLPTLRHVVLVNNLDATKTIADTACYASITARKDAETAAFEPLWLPFDHPLWIVYSSGTTGMPKPIV
HGHGGMLLVMLQLAVLHNDIGCSYAPNSFGERFHWYSSTGWIMWNAQVGGLLGGTTCVLYDGNPGGSKER
PDWGVLWRMAAETGVTFFGAGAAFYGNCMKAGITPAQCGDLSAIRALGSTGSPLPAEVQQWGSDFMAVAG
VPRVWWANISGGTDFAGAFLGGHRELPQTPGRMQCRMLGAAVEAWDEQGRPVLDAVGELVCTQPIPSMPL
YLWGDADGARYRASYFDMYPPGHGRRPGGGDLGPEAGAVWRHGDWIEIGSAAHPGCLIYGRSDATINRHG
LRMGTSEIYSAVEALPEVLDSLVVDLEYLGRESWMPLFVVLREGVALDDALRGRIDDAIRAALSPRFVPD
DIFAVAEVPRTLSGKKQELPIKKLLLGQPLAKVVNRDAMANPGCLDWYVDFAARRGAAAAA
>gi|319760827|ref|YP_004124764.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MNLRQLSQFVTLAETGNFHRAAERLHMAQPPLSVSIRKLEEELGSALFARTRTGVALTPAGQAMLDDARR
TLLHAQQCRQAVLDTREGTGGRLRLGIIGSATYALLPRLIPSLRARYPQITLELSEATSSEILEGLVSRR
FDAGLLRFPLLDASGFDLTPLDRDDFVLAVAETSPLARREAIALHEAAHEPFIMYPRSKVPGLLALAMMR
CQFSGFAPQVAQEAAQVQTIMSLVASGLGVGLVAGVARQVVPRGVKCLRLTDNPPGFHVSIALARLAGNT
SRVVQRFAEHALECAGAPHVEGGGGGGPG
>gi|319760828|ref|YP_004124765.1| hypothetical protein Alide_0091 [Alicycliphilus denitrificans BC]
MSLHRRTALRALLGSGLAALGAATAPAARAQAFPSRTIKFVVPFGPGSGTDTSARYFAKKLQDLTGQAVV
VENKPGANGFLAVKQVLAAPADGYTVFIGSNSTLAVNAALFKELPYDPVKDFSPLTMMMRSPAMLVVPPA
APYGDLKGLLAHARANPGKVNFGAGSAGYQLMGELLNDMAGVQTVHVPFKSAGETMTAVASGTVDYAFAE
VTAVLELARGARLKILAVAADKRVGNAPEVPTMGEAGLSGFEAYTWVGAMVPARTPAAETARLAELFTAI
SKMDETRAFYERLGAAPMTGGPAQMHDFQRKEIALWKRIVSQAKVPLQ
>gi|319760829|ref|YP_004124766.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MSTLDSLALTRIPPEDEALRAEVRAFLAEAIKTLPAHVRARSWGGYSTELSRKLGERGWIGVTLPREYGG
GGRSAFTRYVLVEEYLNCGAPVGSHWIADRQSAPLILKYGTEAQKRFYIPRVCRGEAFFCIGMSEPNSGS
DLASVKTRAVPNDKGFLLNGQKIWTTNAHHCQYMIALVRTSGAPEDRHKGLSQVIVDLQLPGVTVRPIED
LSGDSHFCEVFFDNVQLAPDALIGAEGQGWEQVTAELAFERSGPERLFSSIVLFDQWLDWVRTPRGRTAP
AQRLAGKVLTQLAPLRAMSVAIQEKLVRGESPIVEAALVKELGTTLEQFIPAAIADDLFAREAEDVPVEL
LMTLKYVTEASPSFSLRGGTRDILRGMIARGLGLR
>gi|319760830|ref|YP_004124767.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDNDLFADAARQVLADQCTPAVVRAIEAGGRAAPEAAALWAQLEATGLADALLPESQGGAGLALSQVFGV
LEQCGAHALPLPLGETMVARALLAAAGVDRPAGGIALARGERTPEGGLRCALVRGGRVAHAVLAQAGDAW
HLLGVAGAQEAPQALALDAALAWTPAQLQAAPAVAVDAALDLRTLQAAVLAPQMAGAAMHVFQRTLQYAN
ERQQFGRPIGKFQAIQHQLAVMSEHVFAARMAAQLGCSGAGVRPDRLRVATAKARCSEAALAVSEFAHSI
HGAIGFTAEYDLQLFTRRLHAWRQAAGSESYWHDVAGQALLEHQGLTLDVVRRITDVESVL
>gi|319760831|ref|YP_004124768.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MAFLTLERDGAILTVTMNQPETRNALTGNTAVQEFVQLCDDVRKDAGVKVIILTGAGPIFSSGGNVKDMK
RFFDDALTPDLIREEYRQGIQRIPQALYNLDVPVICAVNGPAIGAGLDLTCMCDIRIAAETATFAESFVR
VGIVPGDGGAWLLPRAVGMAKAAEMAFTGEAINAQEALACGLVSRVVPAGELLPTARALADKIAANPGAV
MRMTKRLLREGQLATLDSLLELSAGCQAIAHKTADHREAVTAFIEKRAPRFQ
>gi|319760832|ref|YP_004124769.1| cdp-diacylglycerol/serine o-phosphatidyltransferase [Alicycliphilus denitrificans BC]
MASPHKRFSMIREFHLADWFTLGNAVCGVGALFSSMTYLETADLRHVYFACALVLAALVFDVLDGRIARW
RQKSSAMGRELDSLADVISFGVAPAIIAYACGMQGLYDRIVLAFFVACGVSRLARFNITAETLAEGPSGK
VRYFEGTPIPTSIVLVGLLALAASTGAVREHLWLGKMMIGGFTLHPLVLLFALSGSLMISRIRIPKL
>gi|319760833|ref|YP_004124770.1| tonb-dependent siderophore receptor [Alicycliphilus denitrificans BC]
MPHCTPSRASSAPAPVLGACAVAIQVMLGSASLSGAVPAAAQSAGGGTAAALPEVTVTQRREAIDEAPPA
YAGGQVGSGARLGILGNAPVLDTPFSVTSYTAQAIENEQARSVADVIAMDPSVRMASARSNINEDITIRG
FAVPSGDFALNGMFGLTPYWRAPLEAVERVEVLKGPSAALFGMAPGGSVGGVVNLVSKRAGAQPLTRFTA
GVMSDSVAGGHLDVGRRFGPDGALGARVNLMRRQGDTNIDHQSTRESLASLGLDLRQSALRASLDLLWQE
QRIDNVVRQFQLAPGLAAIPRAPDNSIAYPGYGWTDGHDGSALFKAEYDINDTLTAYAGLGQRKLNWGSM
AGNPVILNTAGDYSYFGGWQRMGVDSKSAEAGVRASFRTGGMAHNAALAFTRLDQDQTLGFYTGFPGGMS
NLYAGGRQPTPSIAGIDNPLRPYQDSKLTSVALADTVTLLEDRLLVTLGLRHQKVQGQSYNYMTGAASGP
YYDKSATTPLAGVVFKLRPNWSLYASYVEGLSRGETAPVSAAIANPGEAMPPYRSKQKEIGAKFDHGGFL
ATVGLFELTRPSAAVSGNVFGVNGEQRNRGLEASVAGEVARGLRLLGGASFMDAELSRSANAALVGKRAI
GVPRSQLNLGAEWDAGFAPGLTLTGRMVHTAKTYADAANTLRVAGWTRWDAGARYATRIGGKPVTFRLNV
ENLLDKNYYGIATAGYLFLGSPRTVSLSASVDL
>gi|319760834|ref|YP_004124771.1| hypothetical protein Alide_0097 [Alicycliphilus denitrificans BC]
MSTRAWTWVHKWSSLVCTAFMLLLCLTGLPLIFHEEIEHLPGAVEAAPMPEGTPEASMDRIAQAARERRP
DDVIRYMFWDPEEHPNLTYVSMASRVDAPPDENNAVVVDSRTAQVLDEPRTNEGFMYVMLKLHVDMFAGL
PGMLFLGFMGLLMVVAIVSGVVLYYPFMRRLRFGALRTRRSARIRWLDWHNLLGIVTVVWLTVVGITGSI
NTLDRIILAIWQQDQMAEMTAPYKGLPPVTRPAHLQKSIEAARAAAPDMAVRLVAFPGTAFSSPHHYTFF
LKGGTPVTSRLLKPALVDAQTGVLTASRDMPWYVKTLFLSQPLHFGDYGGLPLKILWTLLDLAAIVVLGS
GLYLWLRKPRAAPVPGAEAEPDAEPDAELAPVAAVEAKT
>gi|319760835|ref|YP_004124772.1| hypothetical protein Alide_0098 [Alicycliphilus denitrificans BC]
MTMPTGPRRDARTDEAQPAAEIFRVPILLGLATAVGLVSALVGDGVWDALSWLALAAPAAAVAWAWRAR
>gi|319760836|ref|YP_004124773.1| septum site-determining protein minc [Alicycliphilus denitrificans BC]
MAVDTAGQARTYLDLKSAQLSVVALVLKTADVSAVAAELAARRADDPEFFDNDPVLIDLSAVQGEAQPID
FAALVQALRSHRTQPVAVRGGSPAQMAAAHAAGLIAAPDVPAARAQPRESGAVREVVREVVREVQVEVPV
QAPAPGALVVDKPLRSGQQVYARGSDLVVMAVVSFGAEVIADGNIHVYAPLRGRAIAGARGDTSARIFTT
CLEPQLVSVAGIYRTTETELPDNVRGKPAQVRLDGEKLLIEPL
>gi|319760837|ref|YP_004124774.1| septum site-determining protein mind [Alicycliphilus denitrificans BC]
MAKIVVVTSGKGGVGKTTTSAAFASGLALAGHKTAVIDFDVGLRNLDLIMGCERRVVYDLINVIQGEANL
NQALIKDKQCENLFVLAASQTRDKDALTQEGVEKVLKDLADMGFDYIVCDSPAGIESGALMAMHFADEAL
LVTNPEVSSVRDSDRILGMLGSKTKRAIEGKDPIKEHLLITRYNPNRVQDGQMLGLEDIQDILRIKLIGV
VPESENVLQASNQGLPAIHLAGTDVSEAYKDVVARFLGEDKPLRFTDAAKPGFFKRIFGGR
>gi|319760838|ref|YP_004124775.1| cell division topological specificity factor mine [Alicycliphilus denitrificans BC]
MSLLSFLLGEKKKTAAVAKERLQIILAHERSGRNAGKPDYLPALQRELVAVISKYVKINADDLKVHFERQ
DDLEVLEVKIELPEAAGGK
>gi|319760839|ref|YP_004124776.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MQELGNASSEMAFFHLLVRCGSLSATARELGLTTPAVSRKLALLEQRLGVQLLNRTTRRNSLTPEGEEYL
VQARRILADIEDVEHSLRRSMAEPLGLLRVNATLGFGRSHIAPVISRFCKTYPQVQIQFHLSVTPPPLTD
DAFDVCIRFGEPPDARVIARKVAANRRLLCAAPAYLERHGTPRVPADLVRHQCISIHHGQDAYGIWRLSA
GRRTESVKVAETMVTNDGDIAVAWALDGHGILMRAEWDIDKYLHSGRLRQVLEQYSTPPADIYAVYPSRH
QKARRVTAFVDFLCAELGQATSKTQASPRHRR
>gi|319760840|ref|YP_004124777.1| hypothetical protein Alide_0103 [Alicycliphilus denitrificans BC]
MSHEILRLSRRSTILGLSLLPLAGYAQAYPAKPVSVVIPYSAGGTTDIVARLIAQSLAASTGKTFVAENK
GGGSTTIATGAVAKAAPDGYTLLANEMTQTIIPWLFPKLSFDPIKDLLPVTVFAEAPYVLVVNSGVPAKS
LRELVDLAKAQPGKLNFASGGAGSGPHIAGELLKTVAGVDMTHVPYKGSGPAVADLLGGQVDVLITAAPT
VTAQMGSGRMRPLAVAHPRRLSSLPDVPTAAEAGFPDFRIANWFGLAAPKGTPAEVVAYLHAEVQKVLQR
ADVRDKLLAAGAEPVSMTPAEAARHVNAEARRWGELVRKAQIRLD
>gi|319760841|ref|YP_004124778.1| mandelate racemase/muconate lactonizing protein [Alicycliphilus denitrificans BC]
MKIRKVEPLHVGQFMFVRITTDDGTVGYGEAGTWGHIEAAGVCIRRFAEYLEGKDAFAIEHHWNVMHRFS
YFTGLAENAAISAIDIALWDIKGKALNVPIYELLGGAARTKARIYGHIYEHSIEKMLVECQAKMEAGFNA
FGHLNPFLDEGNDQIYFKTHIKKMRDAIDNTRRMREVVGDRVDLLIEIHRRLTPAEAIVFARGIEDTHPM
FIEDPIRPEGPDGMARVAEKIGIPIATGERFANLYEFQTLMARGGVEYARVDLCLCGGITGAKKVAAIAE
AHHVQVVPHNPLSPIGLAACLQLDAAIPNFAIQEYATGFEAGIFESRPEHLGSDIVDQVPLPDAGFVDIP
TGPGLGMNLLPDAQKIRPPLVKPISMRPHFDGFVVDQ
>gi|319760842|ref|YP_004124779.1| flavin reductase domain protein fmn-binding protein [Alicycliphilus denitrificans BC]
MNSTHHPSPPAFSPREFRDALGMFATGVTIVTTRGAGGELVGMTVNSFNSVSLDPPLVLWSLAHKASSLQ
AFASATHYAINVLTVEQRALAERFATRGIDRWAGVAHRPGLHDMPVIEGVAAVFECTNRSQYAEGDHTIF
VGRVERCTHLRGASPLLYHGGMFYTEHALGQLADTVIGP
>gi|319760843|ref|YP_004124780.1| alpha/beta hydrolase fold protein [Alicycliphilus denitrificans BC]
MSLLPGFSLLGSGPTVLLLHDADGDHLSFAPQLETLASAGYRAVAWDMPGYGRSAPVEPYGFKGLAQRCL
LLLDALRCGEATLVGHGFGAMLALEIALRAPMRVRRLVLCAGGPALDAAATAAWVAPRLAALEQGMDMAR
LADLVARDAGADALPEGLQLARHAMGRVYAATYRRALQALTVFARRAPDLARLHVPTLLIGGEQDRCTPP
EALLALAHVLPDARAVLLPGVGHWPQLEDPDGFEGALLEFLAMPARLH
>gi|319760844|ref|YP_004124781.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MAFMNTLSQPRPSFKEQMHRAREDAIVEAACRLLGEKGFETMTVDEVACAVGIAKASLYKHFAGKDDLCA
AAMVHVVGRLQRFLDELPEGLQALQRLQALLRWLLELQLGDETPLLPSRNSALAQALRTCDAYRASMEEV
HARILGWIAEAQAAAQLRRELPPEVILCALLARSTDPMLAMLRERGHGDAQILDWAVATCLGGLVSAPAA
PERCSWPAPGC
>gi|319760845|ref|YP_004124782.1| uspa domain-containing protein [Alicycliphilus denitrificans BC]
MNILLAVDGSTYTKKMLAYLAAHDEMLGSSHTYTAITVQPPLPPRARAALGKETVDSYYADEGEKVLSPV
VKFMGRHGVQPKTMIKVGPAGETIAKVAESGKYDLVVMGTHGHGSLGKLVMGSVSTQVLANCTVPVLLVR
>gi|319760846|ref|YP_004124783.1| metallophosphoesterase [Alicycliphilus denitrificans BC]
MKLQLLSDLHLEVHPHFSPSPAPGADVLVLAGDIGSYQPGSQLADGDFGLARFSPLPQYAGWPTPVVFVP
GNHEYDGQDFDTAHTRLRRTCDRLGLIWLERESVVLQGVRLVGTTLWSDFDALAGHGADASQGQRLKLRE
KAFRAADFYLRKTGGTRHGEPFLAAQLREQALVCQAWLREALARPFDGATVAVTHFAPSLCSADPRYGMT
PGTAGFCNALDDCLPHARLWLHGHLHAPSDYLASGTHADGNSWSCRVVANPLGYARKGEQAAFQSHCVLT
V
>gi|319760847|ref|YP_004124784.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MPSLNFRTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREAVGDELLVRSGHGVEPTPRAL
ALWPAVRQALGQLQESLAPGGFEPASAQATFVLAMADATGATLIPPLIEITEREAPGISLRVIPLTTRDP
RRLLDDGTIDMAVGYFPAVLADLTARAQADNVVAHESVRLYASQYVCVMRAGHPLADAPLSLDQYCAAHH
LLVSFSGKPYGFIDEALAALGRERRIVLTVNQFFTAGRVVATTDLLTVLPLHFVGLADVGGDLVWRPLPM
PLPTVHVDALWHRRRLYDPAHRWLRETIARAARNTPTPITLRD
>gi|319760848|ref|YP_004124785.1| hypothetical protein Alide_0111 [Alicycliphilus denitrificans BC]
MTKFAVIEFPSQHQGVARIEGAVSHLRRSATRFDPTRNGASLLLAALVAALLVVANEMVDTWGDGHLLAG
WMLMWLIAFVGMALLAAPARRAVALLRGAAKSWSDARRRAAEDERTWNAALHDARIMADLSRAMNGIAVE
DMRRYR
>gi|319760849|ref|YP_004124786.1| phosphoenolpyruvate carboxykinase (gtp) [Alicycliphilus denitrificans BC]
MNAPSMQGLSLQAPAYVKNARLIAWVAEMAALCKPAAIHWCDGSQEEYDQLCQQLVNAGTFKKLNPAKRP
GSYLACSDPSDVARVEDRTFICSEKKEDAGPTNNWMAPNEMRATLQPLFDGCMAGRTMYVVPFSMGPLGS
PIAHVGVELSDSAYVAVNMKIMTRMGKAVYDVIGTDGEFVPCMHTVGAPLKAGEKDQTSWPCNPQVKYIV
HYPETREIWSYGSGYGGNALLGKKCLALRIASTMGRDQGWLAEHMLILGVTNPEGKKYHVAAAFPSACGK
TNFSMLVPPKAFEGWKVTTIGDDIAWIKPQPDGSLRAINPEAGYFGVAPGTNYHTNPNCMASLNKDVIFT
NVALTDDGDVWWEGMEKDTGVVPGHLIDWQGRDWTPQIAKETGAKAAHPNARFTVAATNNPALDEAWDDP
KGVKIDAFIFGGRRSTTVPLVTEARTWTEGVYMAATMGSETTAAAFGAQGVVRRDPFAMLPFMGYNMSDY
FQHWLDLGAKIAGQGAALPRIFTTNWFRKNAEGKFVWPGYGENMRVLKWMIDRIESRAQGLETAFGIAPA
FAEINWNGLEFSAEQFESVTSIDKSVWAEELKLHTEHFDKLAHHLPQELLATKAALEKRLAA
>gi|319760850|ref|YP_004124787.1| hypothetical protein Alide_0113 [Alicycliphilus denitrificans BC]
MAHEHHIAPNAADVEAATATDPTETVVNLIPVVLPAAGAAMIFLLALIAVTMA
>gi|319760851|ref|YP_004124788.1| threonine dehydratase [Alicycliphilus denitrificans BC]
MFSIQDIQDAAARLRGQVLDTPCVESRTLSQVTGAQVFLKFENLQFTASFKERGACNKLSQLTPEERKRG
VVAMSAGNHAQGVAYHAQRLGLRAVIVMPRFTPGVKVERTRGFGAEVVLHGDTLEEAHRHAHLLAGQQGL
TFVHPYDDEAVAAGQGTLALEMLAEQPDLDVLVVSVGGGGLLAGMATAARALKPSLEIVGVQTARFPAMV
NAVKGTQHEQGMSTIAEGIAVGQPGRMTREVIARLVDDLLLVQEGDIEQAVLMLLEIEKTLVEGAGAAGL
AALVRYPERFRGKKVGLVLSGGNIDPLLLAAIIERGMVRSGRLARIKVSARDVPGVLARITATVAEAGAN
IEEVHHQRAFTLLAAQNVEIELVLQTRGKAHVQQVLEQLRAAHMEAELH
>gi|319760852|ref|YP_004124789.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDWTTHHVFNQFPELYDYDPLATDPALCEALARTGAGWARPALNGYAARLGRTETYMLAEQANRHLPELR
RFDSRGRRIDALEFHPGWHALMALYRGQGLVSQPFREARAGRWAAWAAGFYLHGQVEQGTLCPATMTQAA
IPLLQKEPALWAQLQERLYSDAYDARDLPVQDKASIWLGMGMTEKQGGSDVRANTTVATAVGAGGRGGEY
LLRGHKWFFSAPQCDAHLVTARVQEGGPFACFYVPRWRPDGSRNAVRVQRLKDKLGNRSNASGEVEFEDA
WGVLMGEEGRGIPTIIEMAGYTRLNCVAGSAAILRQATVQAIAYARQRHAFGKALAEQPLMRAVLADLAL
ESEASLVLLMRLAEAFEREGDGDPAQRAWKRAMTPAAKFWVCKRAVELTGEAMEVFGGNGYVEDGVMARL
FREAPVNSIWEGSGNVMCLDVLRALAREPGAARALLAELQPAAQGEPRIAAALQGLQALLAASADELEAL
GRVLAQRLVLVAQACLLRAHAPACVADAFIATRLGDGGAGRVAGAIDTRGMDVDAILARAFPA
>gi|319760853|ref|YP_004124790.1| magnesium-translocating p-type atpase [Alicycliphilus denitrificans BC]
MHPHIPREVFAGFLRTRRMVRHFRRRALLETLGRTGVSRELPAAQSRALAAAADADAGALLRQLGSAETG
LTEAQADAMRERAGPNEVEHEKPLPWWVHLWHCFRTPFSLLLTLLAAISLFTRDMKGALVIGTMVVLATL
LRFWQEGRSSKAADALKAMVGNTATVLRGSLPEDAGVRRVELPIRLLVPGDLVVLSAGDMIPADCRVLAA
KDLFVAQAAMTGESMPVEKSAARCGAGAGNPLELDNIVFMGTNVVSGSATAVVLATGGGTYFGALAGRVI
ATDRAPTSFQSGVNKVSWLLIRFMSAMAPLVFFINGFSKGDWLEALLFALAIAVGLTPEMLPMIVTSTLA
KGAVFLSRKKVIVKRLDAIQNFGAMDVLCTDKTGTLTQDRIFLARHVDAWGEESGDVLELAYLNSYYQTG
LKNLLDVAVLEHAEVHRELEPARNFRKVDEIPFDFDRRRMSVVVAEHGAHHLLITKGAVEEVLAVCTQVR
HGAATEPLTPALLERIRAVTAGLNEEGLRVVAVAARQGPPTQDVYGLADESALTLVGYVAFLDPPKDSTA
AALKALAGRSVAVKVLTGDNELVAAKICREVGLAQQGVLRGGDVERMGDEELGHAVERHNLFARLTPMHK
ERIVRRLKANGHVVGFMGDGINDAPALRAADIGISVDSAVDIAKEAADIILLEKSLMVLEQGVQEGRRTF
ANMLKYIRMTASSNFGNVLSVLTASAFIPFLPMLPIHLLVQNLLYDISQIAIPFDNVDEELLRRPLRWQP
GDIGRFMVFFGPVSSVFDITTFAMMWFVFGAQTPAQQTLFQSGWFVVGLLTQTLIVHMIRSPGLPFVQSR
AATPLLVMTGAIMAVGIFLPMGPLAHYFRLQALPPLYFALLPAIVLGYMAATQAMKGIYRRRWGWQ
>gi|319760854|ref|YP_004124791.1| homocysteine s-methyltransferase [Alicycliphilus denitrificans BC]
MTLPHYTRAQQLPAILEQRIAILDGAMGTMIQRFKLTEEQYRGERFKDFARDVKGNNELLSLTRPNVIRD
IHEGYLAAGADLIETNTFGATSIAQEDYGMADLAYEMNLESARLARAACGKFSTPDKPRFVAGALGPTPK
TASISPDVNDPGARNVTFEQLRAAYLEQTLALIAGGADVLLVETIFDTLNAKAALFAIDEAFEQTGECLP
IMISGTVTDASGRILSGQTVTAFWHSVRHANPLSIGLNCALGAALMRPYIQELAKAAPDTFISCYPNAGL
PNPMSDTGFDETPEVTSRLVHEFATERLVNIVGGCCGTTPDHIGAIARAVAPVGARRLFSAVS
>gi|319760855|ref|YP_004124792.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MAGQSPLRGVPGTSLLRGLSASSANRNVNGPAGIMSGMKLHQLRYFAVLAEELHFGRAAERLAITQPPLS
SGIKALEEELGVRLFERTSKYVALTPAGHAYLAEVRMVLDHVARAGETARAVAAGLQGRLDIGFTGSMVY
RDMPRIVRAFGERAPGIDVQLRELSSSEQIDALLHRQLHAGFINTAAVPPGLLCRPLAADHFVCCLPQGH
ALAHGASVALPALEQESFVMFARDVAPANHDNVIALFQRAGIHPRTRHAARQWLTVVSLVALGMGVALVP
ASLAQAGVQGVCFLPIAGLHHPTVGVLAWHEGTDAPALRVFLESAEPFLQSGP
>gi|319760856|ref|YP_004124793.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MNFALTPEQEQIQAAIERVCEPFDADYWLKKDQEGGFPHDFHQALAESGWLGIAMPEEYGGAGLGISEAA
LMMHTISATGAGLSGASAVHMNIFGLHPVVVFGTDEQKKRWLPPLIQGKDKACFGVTEPNAGLNTLKLQT
RAVREGDHYVVHGQKVFISTAQVANKILLLTRTRPAEECKGTEGLTLFYTDLDRSKVEVREIAKLGRKCV
DTNQLFIDGLRIPVEDRVGEEGKGFSYILHGMNPERILIAAEAVGLGRAALARAAGYAAEREVFGRPIGK
NQAIQHPLAEAWMDLEAAHLMVQKAAWLYDQGANCGAEANAAKFLGAEAGYRACERAIFTHGGMGYAKEY
HVERYMRESWIPRLAPVSPQLILCFIAEKVLGLPKSY
>gi|319760857|ref|YP_004124794.1| cupin 2 conserved barrel domain protein [Alicycliphilus denitrificans BC]
MTTSRYLVRAADVPSYQPANHHHTHNQRLIGPETVGAKQMEVLLGTLHKGGGALPHAHPGIEQACYLLEG
TARAQVEDEAFDMVPGDMCFFPADKMHVFTVTSDQPVKLLVIYSPPYGESPDKVIRP
>gi|319760858|ref|YP_004124795.1| hypothetical protein Alide_0121 [Alicycliphilus denitrificans BC]
MKTILRATLAACTLAIGATAALAQAYPNAPVTLVVPFAAGSGTDSVARAVASGLAARLKQPVVVDNKPGA
NAQVAAQFVAKAKPDGYTLFMTTNTSHSANPALYKNLKYDPIKDFTPVARVGELPFALAVHPALPVKTLA
ELLDYARANPGKLSYATPNSTSLVAMESIKHIAKIDVLGVPYKSSPQAMTDLVGGQVQVYVADLGSGMGM
LKTDKVRTLGITTAEPTPLLPGVPPIGKTVKGFDLTSWNGIFGPAGLPPAVVQRLNTELQAVLADKDLQD
KLAQIGFQVWPSKTPEEFAQYVAGQLTHWRTLIQQAGIQPE
>gi|319760859|ref|YP_004124796.1| ATP-dependent DNA helicase recq [Alicycliphilus denitrificans BC]
MSPAHFVLHDVFGYDQFRGPQQAIIDHVIAGGDALVLMPTGGGKSLCYQVPAIVRRDAGRGVTVVVSPLI
ALMHDQVGALHEAGVEAAFLNSTLDWQQTLDVERRLSRGEITLLYAAPERVTTDRFLGLLDGLHERGLLS
LFAIDEAHCVSQWGHDFRPEYRQLSILHERYPRVPRIALTATADALTRADIVEGLRLQEARQFVSSFDRP
NIRYRLEEKKEPLTQLMRFIDREHLGDAGVVYCQSRKRVEELAQALCDAGLTALPYHAGLPAEVRQQNQD
RFLREDGIVMVATIAFGMGIDKPDVRFVAHVDMPKNIEGYYQETGRAGRDGLPADAWMAYGLQDVVNQRR
MIDESPAGEEFKAVMRGKLDALLALAEATDCRRVRLLGYFGEQSEPCGNCDNCLNPPAVWDGTDAARKLL
STIYRVHQASGISFGTGHIMDIVRGKDTDKVRQFGHEKLSTFGVGKEYTEAQLRGVLRQLLATGAVGLHK
VMLESGHSFDTLVLTDGSRPVLRGEQHVQLREATAQAQAAAKPKRARRAATPPVAAANLGQDAQVRFINL
KAWRAEVAREHNLPAYVIFHDATLAAIAERNPATLDELQGISGMGVKKLEAYGEDVVRVCRQ
>gi|319760860|ref|YP_004124797.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Alicycliphilus denitrificans BC]
MAAATPAEALRIGGLTPLTTIDFPGRLAAVVFCQGCPWRCGYCHNTGLLDAATPTAHAWADVQQLLHARR
GLLDGVVFSGGEPTLQAGLPDALARVRAMGFATGLHTAGMYPERLATLLPLLDWVGLDIKAPLHRYDAIT
RTPGSGAKAWESLRLVLASGVAHECRTTWNAGLYGDDDLQALADALAAEGVQHWALQECRTDGAPAWAPP
QAVAQRWPGTFTLRRA
>gi|319760861|ref|YP_004124798.1| hypothetical protein Alide_0124 [Alicycliphilus denitrificans BC]
MSHFSTTEQAALAAVQLTDDERQPCEVWTRVMGYHRPVASFNVGKQGEHNERQFFSEHARGCSNAC
>gi|319760862|ref|YP_004124799.1| anaerobic ribonucleoside-triphosphate reductase [Alicycliphilus denitrificans BC]
MTPPPAPVATLPRDVIQRNGERAAFDAERIRSAIARAGSATGDFGADEAQLLTAQATKVLIHRFRGEAPA
IEQIQDVVEQTLIAANHLQTARAYMAHRQRHALLRADRQTLVHVESSINEYLTRADWRVNANANQGYSLG
GLILNVAGKVTANYWLSHVYAPEIGEAHRSGDIHIHDLDMLSGYCAGWSLRTLLHEGLNGVPGKVEAGPP
KHMSSAVGQIVNFLGTLQNEWAGAQAFSSFDTYMAPFVRKDAMDYAAVRQCIQELVYNLNVPSRWGTQTP
FTNLTFDWTCPEDLREQVPVIGGEEMPSSYGELQAEMDLINRAYIDVMTTGDAKGRVFTFPIPTYNITPD
FPWESENAAALFDMTAKYGLPYFQNFINSELSPNMVRSMCCRLQLDLRELLKRGNGLFGSAEQTGSLGVV
TVNCARLGYLHAGDEASLFAALDRLLELGKQSLEVKRKLIQRLMDQGLFPYTKRYLGTLRNHFSTLGVNG
INEMIRNFTADAHDITSEWGHAFAVRLLDHVRARMTAFQEETGHLYNLEATPAEGTTYRFAKEDKKRWPA
ILQAGTAEQPYYTNSSQLPVGFTDDPFEALQRQEALQGKYTGGTVLHLYMGERISSGAACRELVKRALTN
FRLPYITVTPTFSICPTHGYLAGEHPFCPTCDEERLEAKRRRLLAA
>gi|319760863|ref|YP_004124800.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MMHPTHRTELRKSLYWLAGLLAGLLLVQLFPAPDAARGLARYLPLHTSMEVLSIAMAAMVFGIAWATQKY
RPNGRDLVLGPGLLGVAILDMSHCLSYAGMPDFITPNGPEKAILFWLAARSLAALALLCAAFWPQRHDNR
LGPRARCWSLACVLLFVGAVHYVVLLHPQSVPPTFIPGVGLTKFKIDFEYGLIAAYVLAGMGFLTHLRQD
REFGLTRLALAAFTMAMGEFFFTLYANVTDIYNVTGHLYKIMACAFLYRGLFVETVQAPYQELQASEAQH
RAMLDTLPDLLFELNRQGVYLSVHANDASKLAAPAGQLLGRRLGEILPAQAAAACLDALAEAERSGVARG
QRFRLALPSGVHHFELAIARKANPAGREDTYLTLVRDITATVHDEQRIAFEARLNASLLDLQHSDVQELE
ADFLQRGIRHVERLTHSPFAVLHFVHDGQDPELAACSAGAAGGMPAQAEVWRQECAAQRIQNQPPPGDAL
LRWMSLPVQEGGRTRMLLGVANKAEDYDRQDAQALQALAYAIWRRVVQRRQDAVILRLSEALEQSPHQVV
ITDVRANVLYVNRAFSEVSGYSAQEILGKNPRMLQSGLTPRSVYEEMWRRLPQGQPWQGELVNRRKNGHI
YTEIVSLYPIRDLSGQVTHYVAHKEDITVQREAEERIQALSNFDTLTGLLNKKSFDERLALAIERAGASH
GRLSMLWFDLDNFKLINESLGHTAGDELLVEAANRLRSCLGTQNALARYSGDAFVAIVPQADQASVALMA
QEALRLLQTATSVQGHPVSVSASAGVAVYPDDARTAGTLASAAELAMYRVKEDGRNGLRFFAPEMQAHTQ
RSLELAAGLKDAARKGELFLVYQPQRALGSGALVGAEALLRWRHPQWGLVSPAEFIPIAEQSGAITAIDF
WVVEQAAQQLRAWDAAGLPPLVVAVNVSAAQFARPQLAEELLHILQRVDVSPQRIEVELTEAVALKHPEL
AETTIRRLHDMGFKVALDDFGTGYSSMSYLKRYTIDKLKIDQSFVRELAEKTSDMAIVTAIVRMAHSLHL
STLAEGVETAEQAALLHDCGCDEIQGYWYSRPLEPRAFEAFAKGLPQRGA
>gi|319760864|ref|YP_004124801.1| hemerythrin hhe cation binding domain protein [Alicycliphilus denitrificans BC]
MNIDRFKHDHVDILGQIDRLRQLAHAGVEGNAAAIARGIVAISSTIKLHLAVEDRLLYPALSQSGNPELA
RLSQRFQHDMGSIATAFMAFARRWNTAESVRGDPQSFRREANDVLRRVYERMQRENREFYPRIEAEEAMA
TH
>gi|319760865|ref|YP_004124802.1| nitric oxide reductase large subunit [Alicycliphilus denitrificans BC]
MGKYAKYWYTLIGVLIVTFSLLGYYGAEVYRTAPPIPGQVLVQGSDKPLYTKDSILDGQTAWQSVGGMQL
GSILGHGAYQAPDWTADWLHRELTAWLELAAQKDYGKSFAELDAGQQAVLRDRLKTEYRTNTYDQAKDTV
VISPLRAQAIAETAQYYDKLFSDDPSLHKSRESFAMKENTLPSAERRAQMAGFFFWTAWAAATERPTDVG
GGNGATYTNNWPHEPLIGNQPTGENMVWSVMSVVIMMAGVGFLVWGWAFLRKHDEQDPVPPAHDPLSRVA
LTPSQRALGKYLFLVVALFVFQVFIGGFTAHYTLEGQKFYGIDLSQWFPYALTRTWHIQAALFWIATGFL
AAGLFLAPVINGGKDPKYQKLGVDVLFWALVVVCVGSFIGNYLAIAHILPKEWSFWLGHQGYEYVDLGRL
WQIGKFAGIAFWLLLMARAIFPALLAPNGQDKNLLALLTSSVVCIGLFYGTGLFYGERTHISVMEYWRWW
VVHLWVEGFFEVFATTALAFIFSTLGLVSYRMATAASLASASLFMLGGVPGTFHHLYFAGTTTPVMAVGA
SFSALEVVPLVVLGHEAWEHWRLQHKTPWMADLRWPLMCFVAVAFWNMLGAGVFGFMINPPISLYYIQGL
NTTPVHAHAALFGVYGFLALGFTLLVLRYVRPQMVFNERLMKTGFWWLNAGLVLMISTSLLPIGLFQFHA
SVTHGLWYARSEEFLQQPFLETLRWIRTFGDVVFITGALCVAWQVASAVLFGARTPAAPSTGALAGASR
>gi|319760866|ref|YP_004124803.1| sigma-54 factor interaction domain-containing protein [Alicycliphilus denitrificans BC]
MTVKEAELATVLVDLCADLGTELPQAVRLQRLVDVLRAQFGCGAVALLRLEEERLRPMAVAGLVSDTLGR
RFVVGQHPRLAAILARHEVTCFEHDSTLPDPYDGLLDTLVGEPLPVHDCMGVGLHVEGRPWGVLTLDALA
TGTFGAAARRRLAQSVPLVEAVVRVARLEQELRTLRMAASGPGEGGAALASSERGGVGELEIVGESPALK
RLLHELGIVAASELPVLLLGETGVGKELFARLLHHQSPRHDRPLVHVNCAALPESLAESELFGHVRGAFS
GAVSDRPGRFEAAEGGTLFLDEVGELPLSVQAKLLRTLQNGEIQRLGADRPRSVNVRVIAATNRNLREQV
ASGAFRADLYHRLSVYPVPIPPLRERGNDVLLLAGRFLDFNRARLGLRSLRLSPDAQAALRRYRWPGNVR
ELEHVISRAALKALSRGADRNSIVTLEEGLLDLDALDVPAADGPAAPAAPGPAAGAAAGAALAAPAGTLR
DTVDACQRQAIIAALDRHQGNWAQAARALDVDSSNLHKLARRLGLKS
>gi|319760867|ref|YP_004124804.1| hypothetical protein Alide_0130 [Alicycliphilus denitrificans BC]
MENFPQDIYTEPEPDADTLANLGPLTGMAGIWTGTRGLDVNPKADGPERQAFIEHMELQPIDAQTNGPQL
FYGLRYHTRIVKPDGVETFHDQVGYWLWEPATGTVIQTLSIPRGQAAMAVGHAEAGARTFRLQAVRGSTV
NGIVSNTFLEHAFRTESYTITVSIHDDGTWSYEQDTVLIIPGQAEPFHHTDRNTLRKIGEPVPNPTARAA
ARTPGDAQGR
>gi|319760868|ref|YP_004124805.1| l-serine dehydratase 1 [Alicycliphilus denitrificans BC]
MAVSVFDLFKIGIGPSSSHTVGPMRAARLFVQRLAREGHLPRVARVRCTLYGSLGATGRGHGSDRAVLLG
LCGHAPDTVDVDAIEPLIARIRARHRLPLADGPEVAFDEAADLLLVPDVALPLHANGMRFEAFDAAGGLL
DAQVYYSVGGGFIVSGEAAVDARRQAEIAPDTEVLPLPFHSGEQLLAQAAAQGGSMARVMRVNERHWRTD
SEIDAGLLAIWGAMQDCVARGCRTGGVLPGGFRVRRRAPALHQALQGAPDTLQDPLQVIDWVNLFALAVN
EENAAGGRVVTAPTNGAAGIVPAVLHYYWRFIAGASEAGVIDFLLTAGAIGILYKENASISGAEVGCQGE
VGVACSMAAAGLCAVLGGMPAQVENAAEIGMEHHLGLTCDPVGGLVQIPCIERNALAAVKAINAARMALR
GDGTHHVSLDQVIKTMRETGADMMSKYKETSRGGLAVNIVEC
>gi|319760869|ref|YP_004124806.1| hypothetical protein Alide_0132 [Alicycliphilus denitrificans BC]
MPLRRRLIAFCLAALPLATWAAWPERPITIVVPAAAGGTTDIAARVLAEKMGKDLGTAIVVENKGGGGGS
IGTAQVARAKPDGYTLLMGNIGPVAINFSLYKQLSYKESDLRGITNVISVPNILVVHADSPARSVKDLVG
LAKTRRLNVSTSGVGQSPHMSSEMFRQKAGIEVTLVPFPGAAPAVTALLGQQVDFMIDNLPSSMPHIKSG
KFRALAITSGERAAQLPDVPTMAEAGVPMQVTAWFGLLAPAGTPDAVVLRLQQSARKAMHEPDVRQRFAE
LGGVPGGETPAEYDAFIAQERKSWAQIVKAAGLSLE
>gi|319760870|ref|YP_004124807.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MPMQADIEHLLAQPFGSLPELIARQAAHRPGHTALILEERSLDYAALCAGMDRVARSLQQGGLGPGDVVA
VCAGTSVEYLLAYLGALRAGVAVAPLAPSATAEHLSAMLDNCGARLVLRDREVAAQWPLHAGAVLRCVAL
DDAPEAGEPWSQWLAQGGGAPAPIAPAPDWAFNVIYSSGTTGVPKGIVQSWAMRWAHVRRAVTNGYGPDA
VSLCATPLYSNTTLVAALPTLALGGTLVLMRKFDAAHYLELAERHGATHTMLVPVQYQRLMACPAFDGTD
LSRLRHKFCTSAPFGAALKAEVLRRWPGRLIEYYGLTEGGVRCELHCHDFPHKLHTVGRPGEGADIRFID
EQGRELPPGAQGEIVGRSAGMMSGYHRLPDKTREAEWFDAQGQRFIRSGDVGRLDEDGFIVLGDRMKDMI
ITGGFNVYPSDIEGVLQQHPQVAECAVVGVPSEQWGETPVAYVVPRAGAQPGARELREWLNARVGKTQRV
ADLRLAERLPRSEIGKVLKRELREQYLRANPAAH
>gi|319760871|ref|YP_004124808.1| hypothetical protein Alide_0134 [Alicycliphilus denitrificans BC]
MPIRPSRPRRAMLAGLALGAGALLAPAAQAADAWPAKPIQLVIPYPPGGSADLLGRPLAVQLQQQLGQPV
VLEYKPGAGGTLATQYLARAKPDGYTVLMVLAAHAINDSLYPKLPYDTRKDFAPVSLVANLPMVVAASAK
LQARNIQELVQAAKAAPGKLTFGSAGNGNTGHLAAEYFSSIAGVKMTHVPYKGSAGVVNAMLAGDIDLTF
DSISTSMPHIRSGRMHALAVTSAQRSALAPEVATVQEQGIPGFEVTGWYALIAPAGTPPDIRQRLAREIA
AALRQPQLQSQLAAGGYEPVGSTPEALQAHIDSEIARWAAVVKSTGAKVD
>gi|319760872|ref|YP_004124809.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MQHHSIAINDIPPSPFAGEPPDMFFGLPMAMARAMALRGERIGNDMAQVRLGFQPDQANSRGDVHGGSIA
TLLDCTLAAAVRSHDPAAYGVATIDLTLHFVTAAGGDLIATAHCERRGRSISFARGEVRAEDGTLVALAT
GSFKLIARRQD
>gi|319760873|ref|YP_004124810.1| hypothetical protein Alide_0136 [Alicycliphilus denitrificans BC]
MAHDTPLARCSRRQLLAMAAGAAAAGPLHAQAQAGFATRPVRVVVPFAAGGATDVITRVLGEHMARRFGQ
PVVVDNKPGAAGLIAGEAVVKSAPDGMTALLGTTSTMLTNKYLYQKTAYDPLTDLTPLVRVCLAPIALVV
SADVPARNMQEFMAWIRANKGRLSYGSYGIGSHGQLACATLSDIAGADMSHVAYKGEAPMVQDLLGGQIK
MGMGSLLSLKAHIDAGKLRALAMTGPRRVPLLPDVPTFAEAGYPQDALALVGWLAIAGPKGMPAQVARQW
AEAANQAVASRDGMARIIAAGFVPVDDDTPEKFARLWAQEAPIWGRLLQAAGVQPT
>gi|319760874|ref|YP_004124811.1| hypothetical protein Alide_0137 [Alicycliphilus denitrificans BC]
MAITRRKTLARCLPLIALAAACGMGGAQAQDSYPSKPIRVIVPYPAGGGTDTIARLIGTQLSQLLGQPVV
VENKPGASGILGNDIVAKAPGDGYTVLMGITALVQIPALYKKVPYKLGDLAPVSQIAKSADLLMVPRSSG
VTTLQQFVDKAKAAPGTLNYGSYGNATSSHMNGERFKQKAGIDITHIPYQGSGPEMAALLGGQLTLAFVD
ATGAYPHIKSDKVNILAITGSQRHPALPQVPTMTESGYPGLEANGWFGMFVPASTPKAIVDKLGAEVASI
VKSPELNKRLTDMGLIAVGSLPDDFKAQVDKDAAHWKSVAESARISMD
>gi|319760875|ref|YP_004124812.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MQDLIQRTIYREDHEQFREQARRFFDKEIVPFHAQWERDGIVPKEVWRKAGREGLLNTMLPEPYGGGGDF
GHAAILIEEVARTGASGLGFPLHSDIVAPYILAYGSTEQKDRWLPRMAAGELIGAIAMTEPGAGSDLKSV
RTTARLVKDSEGDHYILNGSKTFITNGINSEIVIVVAKTSPELGAKGVSLIVVEEGTPGFSKGRKLEKIG
LMAQDTSELFFDNVKVPVGNLLGEENMGFKYLMKELAQERLVVAVRAAASIEAFLQKTVDYTRERKAFGQ
TVFEFQNTRFKLAEAKAQATMLRVFVDDCMRLHMQRQLTPERAAMVKLNATALQNRLLDEFLQLHGGYGY
MTEYQVGRAWTDARIGRIYGGSDEIMKEIIARTL
>gi|319760876|ref|YP_004124813.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MQDFFGRAQAAPERVVVFMADQGRSYTAGALAQMAQQMAQWLAAQGLQTGERFAVLLENRVEILALVLAA
RQAGLYAAVLSTHLTADEVAYIVGDSGARLVVASDKTLSQLQGIGLPCWTVDEARPQAPSLHAALAALQG
PPVDFADRPLGRDLLYSSGTTGRPKGVLKALWPAELRGQADPEAVSTARLLGMGEDTVYLSPAPLYHAAP
LRYTLRALELGGRAVIMERFDAENALALIERYRVTHSQWVPTMFGRLLKLPAQVRQRHDLSSHHMAIHAA
APCPVDVKRAMLDWWGDILMEYYAGSEGCGTTMIDSTEWRLRPGSVGRPTTGRLHIVDDEGRELPAGEIG
QVYFSGGGQFTYLNDPEKTRQAINDRGWVTYGDIGHVDAEGYLFLSDRRADLILSGGVNLYPQEIENALA
RHPGVQEVAVVGVPHPDFGEVPLAAVVLHPGQEATPETARAIAARAAEVLARLKLPQRMVFVDALPRLET
GKLLRRQLKERFREQPQAGFALRDS
>gi|319760877|ref|YP_004124814.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MKNPVIVDAIRSPMARAKPDGALAQLHPVDLLSQVLQQLVERNKIDPGSVDDVICGCVSQSGEQANTPGR
LAWLAAGLPMHVPSTTIDRKCGSSQQAVHFAAQAIMAGVQDIVIACGVESMSRVPMGSSRMGKNTTGARF
DALYAPGLVGQGVSADLVAAKWGLGRTELDAYAARSHQRAHAAQAGGGFAREIVGMDTPAGRVAQDETIR
AGTTVEKLAGLKAVFETEELSARFPQIQWNTTAGNASQMTDGAAAMLIMSEERALQLGLTPRARFVAFDV
VGDDPLYMLTAPIPATQRVLAKARMKLDDIHHYEINEAFASVPMAWQKELKADGERLNPRGGAIALGHPL
GASGIRLMTTMLHALEDSGQRYGLQSMCEAGGMANATIIERL
>gi|319760878|ref|YP_004124815.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MKLQQGMTALVTGGVSGLGEASAIALLERGLQVVAVDLNDERGQAMEKQYAGRLRYVKADVSDEAQMQQA
IAAAEAFGNFRALVHCAGIGGPVRLVEKDGSPGSLEKYVNIIRVNQIGTFNTLRLAAASMARNEPVDGER
GACVLTASVAGYEGQIGQIPYASSKAGVIGMTIVAARDLASKFIRVCTIAPGLFDTPILAKLPENVRQSL
AASVPHPARLGHPAEYAMTALHILENPMLNGETIRLDGAIRMQPR
>gi|319760879|ref|YP_004124816.1| hypothetical protein Alide_0142 [Alicycliphilus denitrificans BC]
MPPCNRRRALHLTGACALLALGALATAPAARADAAWPTRPITFVIPGAAGGTTDTPARFMAQKLGERLGQ
PIVVDNKPGAGGMLGAGLVARAQPDGYTVLVGNTGSNAINYSAYQKLGYKPDDFIALTDMISFANVLVVP
VKSPIKSLGELVAAAKKEPGKLAFSSAGVGQTTHLMGELLRQRAGVDVVHVPYKGSAPATMAIVSGETQF
MFDNLTGSLAHVKDGKLRALAVTGATREPELPDVPTMTELGMRDFDKVGWMGFFLPAKTPPEIVKKLTDN
LVAVLKDPAVVQRYRELGGRPGGMASAQFSQMVERDRKDWGELIRSQKLQLD
>gi|319760880|ref|YP_004124817.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MTDTSSFAGRHVFVAGGSSGINLGIAQAFARAGAHVTVMSRSPDKVQQAAEGLRALGAQALGISADVRDS
AAVDAALRQSHALFGDIDVLVSGAAGNFIAPAKDLSPNGFRTVIDIDLNGSFHVLRLAYPLLRKPGASVI
NISAPQGVNPTMYQVHACAAKAGIDMMTRVLAMEWGEDGVRVNAIAPGPIADTEGMRRLAPSPEALANAV
ASVPLQRMGTLEDIAHMALFLSSPQAGYVTGAVIPVDGGSSLRGGRDMRASYTPRGAA
>gi|319760881|ref|YP_004124818.1| hypothetical protein Alide_0144 [Alicycliphilus denitrificans BC]
MSGGRQRMRTGVEMVGAVQCFLEKKPQPFQRPGC
>gi|319760882|ref|YP_004124819.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MNTDADGKLVSALVRGISILRCFGHKRTELSARELMELTGLPKPTLFRLTDTLCELGLLRYSERLSKYVP
GLGLLQLSSPVLTRMALRQFARPLMQSLADLTEGQVQLGVGHKRELCLVELANGMGNSVYRPEIGVRMSL
SRTATGRAYLLGMADDAREAYLQDLQASDPQRAAWLAQRLVNAREDMERHGFCRSHGDLHSEIESIAVPM
SQPQDGELWIFAVSVPVFSPLYDRLESDLGPRLRTLVRSVEAVVGAGVP
>gi|319760883|ref|YP_004124820.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MKVLDSVRVLEIGGLGPGPFCAMHLADLGADVISVVRKDQGGSPTGSLLNRGKRSVFADLKTEEGRRLVL
ALVQDADALIEGMRPGVMERLGLGPEECLALNPRLVYGRMTGWGQSGPLAPRAGHDANYAAVSGALWGSS
PADARPVSPFAVLGDIAGGAMYLMTGLLSGILQARATGRGTVVDAAIVDGAAHMLNLNLSARQRGVVADE
RGHSMYDSSPFYETYVCADGKHVTLGAIEPQFYALLLATLGLAGDPDFAGDQWDKAAWPARRARLAALFL
TQPRAHWQALLEPTDVCFGAVLSPVEAAEHPHMRARGVYTERAGVLQAMPAPRFDGAPYLPGDGCAPGAH
TAQVLAQLAGQGAKAVWRR
>gi|319760884|ref|YP_004124821.1| extra-cytoplasmic solute receptor [Alicycliphilus denitrificans BC]
MSHPFCHIVPLRRRSVLLGGAALLGMLSSPAWSQEVARIYVGFAAGGVTDLAARLLAPALSAELGQTFIV
ENRPGASSALAIKAVEGSAPASHTFVLYPTLALLGFLLNGQQPALDRITPISLLYEQFAVLAINPQVAGL
ENVRTLQDLLQVAKAKAGTLTYTSSGVGSTGHLAMEWVCSLAGVKMQHVPYKGGAPAVTDVLGGHVGTIF
ADSTIIAPHVKSGKVRALAINYPVRVPGFAEVPTVAEQGFKEVSAVPWVVLAGPPGMSDAAADRMAAAVS
RVLAKPDIAQSMQEQNMVPRHSTPRETRQLMQRDMLAWRKIIEDNGIKL
>gi|319760885|ref|YP_004124822.1| hypothetical protein Alide_0148 [Alicycliphilus denitrificans BC]
MSEAPARPLPQPTDLTRPYWQAAARGELHMQHCGACGRWQFYPRPFCIHCEAEALQWRPVAGTGKVYTYT
VNHRAPNPFMKARLPYVVAMIELDEGPRLMANVLDARPGDMAIGRRVEVAFERVSDDMALPQFRLLAE
>gi|319760886|ref|YP_004124823.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MNPSLSKSVAIVGVAESDLGKVPGKSALELQAQAAMLALADAGLKLSDVDGVFAHTDDRFSSLQVSEFLG
LRPRFVDSTNVGGMSNLLHVQRAMAAIAAGMCEVALITYGSTQLSDGSRKGGAVAADVPHTPRGQFILPY
GHLSPIGYYAMVAQLHMHRYGTTPKDLAEVAVAARRWAQLNPKAYRREPTSIDEVMASPLVAEPLRQRDC
CLVTDGGGAMVVVSAGRARDLRQKPVYVLGAAETHAHHYTPFNTGDWLDTGVASTAEAALRMAGVTRADI
DVVQIYDHFTIGVIQSLEELGFCKRGEGGAFVADGALAPGGRLPVNTSGGGLSYGHPGMFGMFVAIEAVR
QLRGECGERQLPKAELALCHAPGLVFSCNTTMILGV
>gi|319760887|ref|YP_004124824.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MPMTSVSETPRPMFGAEHALYRASVARFIANEITPHHAEWEREGRVPRQLWRDAGAAGLLCPSIADAYGG
GGGDYLYSAIVVEEIARALATGVTGFTTHSENVAPYLLEFGSEAQKREFLPKMASGEVVGSLAMTEPGAG
SDLKAIRTTAKAVDGGFEITGQKTFITNGAHADRVIVFAKTSPEAGARGISLFWVDTKTPGFAVGRVLDK
IGQLAQDTAELFFDKVFVPRDALIGELNAGFGYAMSGLVRERLLIALRCAVALEVALDWTIDYVKQRQAF
GHALIDNQYIRFRLADIKTHAAATRAFVDSCLAQYLQGQLTADGAAMAKLWASEATRAIDDLMQFFGGNG
YMREYPIARAYADVRPNRIYGGSSEIMREVIARGL
>gi|319760888|ref|YP_004124825.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MSPLEQWARERPEGIAYRMVPSGHAVSWRELELRSRKLSAAMVQAGLRAGDGIALMLENHLRYFEILWAA
HRIGLYYTPISRHLKTEEMSHIVRDCDAKWLFCSARTAGELDAQVLRGLPVRRVMLDGQADGFDEYEALI
AAYADDVALPETPEGMDFCYSSGTTGLPKGIKRALADAGKHFASKSDPRTHWKDFDTRSVYLSTAPFYHT
APVRWNMAVMRAGGHCVMMEKFDAELTLQAIDRFKVTHAQFVPTMFIRMLRLPDDVKAQYDPGSLRYAVH
AAAPCPATVKRAMIDWWGPILYEFYSGTELVGRTSLDSHEWLAHPGSVGRAEVGRIHIVDEAGRELPPGE
NGVIYFSGGPRFEYHKDPAKTHSAYNDRGWATYGDIGHVDEEGYLYLTDRLANTIVSGGVNIYPQEAENV
LHEHPAVLDVAVVGVPDAEFGEAVKAVVQLQPPHQASPALAAELIAYCRERISTLKCPRSVDFVDTLPRA
ESGKLLKRLVKARYWDGGRGIAH
>gi|319760889|ref|YP_004124826.1| 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-coahydratase [Alicycliphilus denitrificans BC]
MAIDYDTLRQWQIADQRDRYGADDCIRYALSLGMGADPLDEADLRYVLEGENMSVMPTWLACVGAPGAWA
SDPGTGIDWMQILHGEHRMRFHAPPPPEGEVLSQTRISRVVDKGAGKGALVVTERRASNAATGQLLATVE
HVSFCRADGGFSSPAQPGDCAPQALPAVPEREPDATMDMATLPGAALLYRLNGDRNPIHAQPGAARAAGF
DRPILHGLCTFGMAARALVRMACGNDPARLASIAARFSAPVFPGDTLQARLWFERDGDARQARFSVWARE
RGRMVLSHGVADIRKPLASAGTARGQAHVTA
>gi|319760890|ref|YP_004124827.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MNAQARPMDGKVVVVTGAGNGIGRATALLLAGQGASVVVNDLGASGSGEGSDAGPAQKVVDEITAAGGVA
VANTDSVATPEGANAIIQTAITRFGRIDGVVNNAGILRDRIFHKMNREEWQAVIDVHLNGSYYVSRAAAP
YFKDQENGAYVHMTSTSGLVGNFGQANYAAAKLGIAALSKSIALDMARFHVRSNCIAPFAWSRLIGTLPS
ETEAEKKRLERMQSMKPEQVAQVAAFLLGNAARDISGQIFAVRGNEVMVMSQPRPVASVHSGEGWDAQSL
ADRAMPALRRAFTPLERSPEVFNWDPV
>gi|319760891|ref|YP_004124828.1| extra-cytoplasmic solute receptor [Alicycliphilus denitrificans BC]
MWSRIFQMGAPVIAAVSLALPLSAHSQGEVFKASKPMHIVAPSSPGGILDQTSRLVAKALTDIVGQPVIV
DNHPGAGGTIGIQTMLRAEPDGHTLVMGSLGPNAANYTLQDKLPYTAADMTGVIRVLTMPDVVVVNPKLP
VKSIAELKAYAQNSPNGVSMAVSTSGSSGHLAGAMLNQRAGIKAVEVVYRGASPALTDLVGGQVDYMVDN
LITALPLVRSGKLRAIAVTTRERSAELPDVPTLMELGYKDFDVSVWLGLFVSSKTPAATVQALNAALNKA
LSDPQVQKTIAQQGGSATGGSTEEFAQFVRNETTRWAEVIRAGNIKP
>gi|319760892|ref|YP_004124829.1| transcriptional regulator iclr [Alicycliphilus denitrificans BC]
MATPDSEGFVRSFARGLRVIEAMGRTGAHTVSSVAQDTELPRTVARRILLTLCELGYACPTPDKGFRLTP
KVLSLGLTYLTSQPFWGHAQRVLETVCLQLRESCAVAVMQGNEVVFVLRIPSAKVMSPHLGMGSRLPAYA
TAPGRVLLAYQGAGYQDQYFGQTPLRPLTGQTQTDPAELRHELARIAQQGHAWVEGEYDAHVSGLSLPIY
DERRKVVAALGASLLTSDFDRARAEREILPPLRAAAEQLSGLAPSFLAPVL
>gi|319760893|ref|YP_004124830.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MPQFPVTVPASTSTHSRAQPLWVMLLALLSGFALSQSYRTITAIVAQGLQADFGLSAQSLGAFAGLFGLS
FGVAQLLMGITMDRYGLRRTVLASAPLSIAGAALSALAPSHGWLMAGQLLIGIGCSPAFLACTVFIARHF
PSERFAFFSGLSLGMGGLGLMLTGTPLAWVVQHWGWRTGFGILAVLSALSWLLIFALVHEPSLPGRAPHA
QESWGDSLRGLAELLTLPHTWGILALGMSCYAAFLSLRGLWLGPLLMDRFGFSLVDSGNVALVLSLISLF
APGAFGRMDPGPLRRRAWVANASLLMAAMFAAMALLQQAGATVALMILLGLLWGFSVLQYTDVRASYPPE
LTGRALSLYTMSMFLGVALMQSATGAVAAWAAGRGIEPYLAVLLAIAGWLALASLAFRMLPASPLLRR
>gi|319760894|ref|YP_004124831.1| citryl-CoA lyase [Alicycliphilus denitrificans BC]
MTDLVRNACSFLFVPATQPDRLPKALASGADMVIADWEDAVTPADKERARSALAGAVAALDGARRARLLV
RINAEGTPWFAADLQALQQLMAQGLAGAVVPKAESAQTLQAVARAAGPQAALLPLVESVAGLYAVDVLAA
APQVARLAFGHLDFQVDAGMACDPDEAELLPMRMAVVLAARRAGMAAPLDGVTVDTRNPERMASDAERAR
RMGFGGKLCIHPAQVPVLHAAFDPGEAAVAHARRVQQAMQEAGGGVCVLDGRMVDAPVLAQARQTLERHA
HAQRRSA
>gi|319760895|ref|YP_004124832.1| transposase is4 family protein [Alicycliphilus denitrificans BC]
MRGSQDFQGAMFSYISLEERVPQAHPLRKLRAVVDALLATMNREFEAVYARRGRPSVPPEMLLKALLLQI
LFSIRSERQLVEAINYNLLYRWFVGLNIEDKVWDHSTFSANRERLFNEDLARAFFERVKLSAQWGKLASD
EHFSVDGTLIDAWASHKSFKRKDDDSGTPPGRNPEVDFKGQERCNDTHESTTDADARLFKKSQGDKSRLC
HMGHILMENRNGLIVDVEITHASGTAEREAALAMLERRGNRNKRATVGADKGYDSKAFIKGCRKLKVTPH
VAAKDKHSAVDARVTRHEGYKTSLKVRKRIEEAFGWIKTVGGLAKTKLIGQAKLTGQALLCFATYNLVRM
GSIGGWWDAHHA
>gi|319760896|ref|YP_004124833.1| mmge/prpd family protein [Alicycliphilus denitrificans BC]
MKQEIQVSIHPLAQFAAQLQWSDVPAPVQDRAVDLWVDWFGSVLAGCKARPVASIARFALSQGPASGPSE
VIAQGASSSPMMAALANAAASHFAEQDDVHNGSVFHPAAVVFPPALAVAQAIGASGAELMAACVAGYEVG
IRVGEFLGRSHYKVFHTTATAGTLAAAAAVGRLLQLTPAQMQHAFGSAGTQSAGLWEFLRTAADSKQLHT
AHAAAAGLMAAYLARDGFTGAQDIFTGAQGMAAGMSSDANPARLTDGLPNGGVGRWATAETSFKWHASCR
HTHPAADALQQVMREHGLKPADIAQVTCHVHQGAIDVLGPVVSPTTVHQSKFSMGTVLALAAHFGHAGLT
EFDAQFLAPDTVALREKVRMELDAEVDAAYPQRWIGKVTVQTTDGRRLHGRVDEPKGDPGNTLSREEITA
KALRLAAYGGAVGTAQATSAVASLWQVAQWPRVGDLLAAGA
>gi|319760897|ref|YP_004124834.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MPRPLDGITVVSLEHAVAAPFCTRQLADLGARVIKVERPGSGDFARGYDQRVRGQSSHFTWINRSKESLA
LDVKQPQAKAALMQLLKTADVLVQNLAPGAAARMGLSYEALKEHNPRLIVCDISGYGADGPYRDKKAYDL
LIQSEAGFLSVTGTPETPSKSGISVADIAAGMYAYSNILSALLLRARTGEGSHIDVSMLEAMGEWMGYPM
YYAYQDAPPPPRTGASHASIYPYGPFTAGDGGTVMLGLQNEREWKTFCDAVLQRPEVATDARFCSNAQRN
QHRSELQALILEVFAALTAAQVVERLDAAAIANARVNDMAGLWAHPQLKARQRWRSVGTPAGEVPALLPP
GVNSAFDYRMDAVPAVGQHTAAILAALGWTDGQIDALQAPQAT
>gi|319760898|ref|YP_004124835.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MIEQTSSNNHHEIRDAIRALCAEFPDEYFRKVDEQRAYPAEFVDALTKAGWMAALIPQEYGGSGLGLTEA
SVIMEEINRCGGNSGACHGQMYNMGTLLRHGSQAQKEKYLPKIASGEWRLQSMGVTEPTTGTDTTKIKTS
AVKKDGRYVVNGQKVWISRVQHSDWMILLARTTPLAEVTKKSEGMSIFMVDLAEAQKKGLTVRPIPNMVN
HETNELFFEDLEIPEENLIGEEGKGFKYILDGLNAERTLIAAECIGDGYWFLDRVTSYVKDRQVFGRPIG
QNQGVQFPIADAFIEVEAANLMRWKACELFDRHEPMGAQANMAKYLAAKASWEAANACLQFHGGFGFACE
YDVERKFRETRLYQVAPISTNLIYSFVAEHILKLPRSF
>gi|319760899|ref|YP_004124836.1| hypothetical protein Alide_0163 [Alicycliphilus denitrificans BC]
MAAMTDTTIDTALLAHLQTWQGRTETLSDSIAAVPVQALSATLDRDDPAPAAGTPLPPLWHWMYFLPHAR
ASEIGPDGHPKRGGFLPPVPLPRRMWAGGRLAWEPTNPLCVGQQVQRRSTIRSVKHKAGRTGELLFVLVE
HQYHNERGLALTEEHDIVYRSAARPGDPAPPPQTPPLAGQQAWSRAIVPDDVLLFRYSALTFNGHRIHYD
RKYVTEVEGYPGLIVHGPLIATLLLDLLRREMPGAQVAAFDFRAVRPTFDLHPFSVHGKPSADGRTVELW
AQDHEGFLTMQGMATLA
>gi|319760900|ref|YP_004124837.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MAQKMVQDKVVVVTGAGGGIGRDMALALAAAGAKVVVNDIGTSTTGEGQDAGPAQKVVEEIRAAGGQAVA
NMDSVAEAAAAGRIVQCALDHFGRIDGVVNNAGILRDRFFHKMSLDEWDAVVKVHLYGSYYMARAAANHF
KEQESGAFVHMTSTSGLIGNFGQANYSAAKLGLVALSKSIALDMQKFNVRSNCIAPFAWSRMIGSIPTDT
PEQQARVAKIQQMTPNKIAPLAVYLLSDAAKDVNAQVFAVRNNEIFLMSQPRPVRSVHRSEGWTPEFIAE
HGMPALKSSFVPMERSGDVFSWDPV
>gi|319760901|ref|YP_004124838.1| 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-coahydratase [Alicycliphilus denitrificans BC]
MAIDYRHLKNRAFEPVHQHYTERDTMLYALSLGLGNDPLDAAALPFVYEGMSGGLRALPTLAVVLGYPGF
WAREPDTGIDWVKLLHGEQRVRWHRPLPADCEVIGKSRITHLIDKGEGKGAILVTERLLETRAGALLATL
QQVTFLRGDGGYSQHGGGQPSDEPLPALQPTPQDRAPDFTDTQAIRPEAALLYRLMGDYNPLHAEPEVAR
KAGFERPILHGLASYGLVARAVLRQCAGGDPALLKALDIRFASPVYPGETLVTEIWRVPGQPGKIQLRAR
VAERDKVVLSHGYAELA
>gi|319760902|ref|YP_004124839.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MSASPVLTSVQDGVGTITLNRPEARNALNQAMRPALAAAIAQMRDDKEVYAVILTGAGGAFCSGGDISAM
LDTSRTGLTFRAGMRELHQWFPELVNLEKPVIAAVDGPAFGAGLSLALSADFVLATRRARFCAVFGRIGL
IPDLGALHLLPRIVGMQKAKELVFTARTVEVEEARQLGMVYDVVEDGAALHAAALALARRFGEASTAAIG
MAKTIMNQSFESSARTIAELESYGQAMCRGSAYHQEAVQRFKDKQPLRFDWDKK
>gi|319760903|ref|YP_004124840.1| acetyl-CoA hydrolase/transferase [Alicycliphilus denitrificans BC]
MSALADRLRQLIRPGDTLWWGQTTAEPLTLTRAVTAHRHALAQGARLRVFVGIAASDTLAPEQADAIDFF
GYAAGGAHRRLADAGVLDILPCHYSHLPGLIRAGVLPVDVVLLQVSPPDEQGRYSLGLAQEYLPAALEKA
RVVIAEVNPGIPWTHGGVHLRTGDFALCIDAEHPPLEQSRSAPGPAEQAIARHIAALVEDGATLQLGVGN
LPEAVLAALHGHRDLGLHSGAVGDGIARLAEAGVLTNAKKSVDAGVGVGGILMGSECLRRWAHRNQQLAL
RGTEYTHDPEVLAASHKLAAINAAIEVDLTGQINAEVAAGCYVGAVGGAVDFLRGAARSKGGLPIVALPA
TAKGASRIVARLSGPVSTPRSDAGLIVTEHGVADLRGQPLSRRVRRLIDIAAPEHREDLERQAYETLRRC
GAAFNQK
>gi|319760904|ref|YP_004124841.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MRRAAIVTPVRTPVGTFGGSLRPVPVEELAATTVRAVVQKSGIDPARIDDVVMAQSYANSEVPCVGRWAA
LQAGLPVEVPGMQLDRRCGGGLQAIVTASMMVQSGAADVVIAGGVESMSNIEYYSTDMRWGARSGNVRFY
DRLDRGRERSQPVERFGKISGMIETAENLARDYSITRDEADAYALRSHQRAAAAWAAGRFADEVVPVQVP
QRKGDPVTFARDEGFRADVTTESLAKLRVLMPNGTVTAGNASQQNDASAACLIVAEDKLAELGLTPMATL
VGWAAAGCEPSHMGIGPVPAVKKLLARLSLKIDDMDLVELNEAFACQVLAVLKGWGWQDQGAIEHKLNVN
GSGISLGHPIGATGVRILATLLHELQRRKGRYGLETMCIGGGQGIAAVFERV
>gi|319760905|ref|YP_004124842.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MDLNLVRMFIAIAESRNLTDAARRSGMTRSNVSRRLKALEREYGAQLLRRTTRHVELTQAGRILYGHCQQ
AMNELQDAQRKIEQMHRTVSGEIRVRIPTGLGHFYLKPLILEFCKNHPELQLRLVINDQIHDLVASKVDL
AIHITSAPLVDHVATKVCDIRWCLVCTPQYLQQHALHLEQPVDLKQARLIAPLALGQRVEFTGPGGAGKV
LVQHGASIQSGDYQFLFNAASQGLGIALLPSYAVCEALKRGDLVRVLQRYEVMGIGNALYVVRASNRQPS
AATVAFIDLLTTSVRAMAPHWDLHDAP
>gi|319760906|ref|YP_004124843.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MGTTPVQELMPLQGFTVLDLSQGVAGPYCAQLLAGQGARVIKVEPPQGDWGRHVGVASDGHSTISSTYNS
GKQSLAIDARRPEGRAVILRLAERADVIVQNFRPQVVERLGLDYESLRARGLGPVYVSISGYGPDGPFAD
HPATDSVMQADSGLMHTNRDAGGTPQRIGLLLADIAAGVYAAQACTAALLHKTRTAEGSHVQISLFNVCC
ALQSTVFSEELAGAQAARQPVSAPNGIFDAADGKLTILALNNEQFLRICKAFDLRHWETDPRFASNALRL
EHKALLHAELSRKVAPQSLAQLEALLGQHQVLHARVREGRGVVEHPQARHLHTFQTIEQPGFGPLLWAAA
PWACHAGAAQPAPRIGEHSQAILHGLGLDAQEIAALVAQQVVAV
>gi|319760907|ref|YP_004124844.1| alcohol dehydrogenase zinc-binding domain protein [Alicycliphilus denitrificans BC]
MNTMKALVCREFGPPQDVVALQDVAPAPRAGMDEVLIEVHYATVSHATGLLIEGRYQKTPPLPFVPGTEG
VGRVLACGGDVGHVRPGDLVAFICDWGAYGEQIVVHGATVYPIVAGLGALQALAVPISYGTAYAALHWRA
QLRQGDTVLVLGAGSGVGAAAVELARLVEGVTVIACASSAQKRQAALQGGAHHAVGPDGLIGQVKQLTQG
RGADLVFDPVGGDLLLQALRCTAQNGKIVSIGFASGTIPQVPMNILLVKNLTVFGFFYGQYIGWTPANER
VKYAAQMQAMMAELFALARRGAIHPAVTQVFPMDQLCQALSALHGRNVVGKVALAIKGDIP
>gi|319760908|ref|YP_004124845.1| hypothetical protein Alide_0172 [Alicycliphilus denitrificans BC]
MKQHPHHATPAWHGSRRKALQALASAAALGAAALAPAVARAATDYPKAPIRLVVPYPPGGPTDLVGRVVA
VAMGDILKQSIFVDNKPGASGMVGSAMVAKAPADGYTLLSNASLHVINPAVYDKVPYDAFNDFAPITQIV
DVPLVLVVRSDMPVSSVQELIAYLKQSKGAVNFASAGNASSQHLSGELFKIRTGIAMQHVPYKGSSPALT
DLMGGQVQLMFDSMPSAMPFITSGKLKALAVTTRKRSSSLPQVPTMQEAGVAGFETSTWYGLWAPRNTPA
DVVGVLAKAAQEALRKPEVAAQYQRMGAEPVGSSPQEFEAYMKSEEKKWAEIVRLSGAKAD
>gi|319760909|ref|YP_004124846.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MKILSPSLIELHAFLAVCRQGSFRRAADDLCVTQAAVSRAVQRLEEHLAAGRLFERSPAGVVLTPRGAQW
RKLVERHVLALESAAETLGRASRPRLVRLSVIPTLSIQWLMPRLPGFHERSPGVKVELRQFRHDEDFTRD
DVDLWLDVKRPSRRWPERIQTRYLIGRELIPVCTARLAKAYRTPRDLQGATLLHHTNFPDNWARWFAKAG
APCTPRLGPGFDLTMHLIVAAKAEMGVAVVPACLVERELRAGELVMPFDVEVSSGRGYFLCWKRDAAAFA
AREEFSGWLLEQAHAGGGPGAG
>gi|319760910|ref|YP_004124847.1| hypothetical protein Alide_0174 [Alicycliphilus denitrificans BC]
MPINRREFVGLAAAGSLAPWVHAHAADAYPSKPITLVVPFTPGGSVDNSGRLMADRLSRELGVPVIVDNK
GGAGGALGSAFVAKAKPDGYTLVVASQSTHVVNPAVNPNLPYDAVKDFAPITLIDRLANVLLVNASVPVQ
TFADLVKYAQANPGKLNYASAGVGSVSHLSMELLKTQARIHVTHIPYRGAGVALTDLLAGQVQLAWNNLS
SNLPNIRNGKLRALAVAAPQRVPQLPSVPTFAELKLPDLNLTSWTGLAAPAHTPDVIIGRLYSAVRKVLQ
DPATQATWVERGMMVPEDVKPQAYQAEIVERIKFYQRIAKANNIVIE
>gi|319760911|ref|YP_004124848.1| amidohydrolase [Alicycliphilus denitrificans BC]
MSAAPDRRAAYARIDQLLPYEQELVAIRRHLHQNPELAFAEHGTADFVAGRLQEWGYEVARGIGGTGVVG
TLRQGDGSRRLGIRADMDALPIQEATGAAHASRAPGLMHACGHDGHMAMLLGAAKYLARQRNFSGTLHLI
FQPAEERGFDSGGKAMVDDGLFERFPCDAVYAMHNHPGVPQGRFLLRSGAFMAAGDRVFIKVLGVGGHAA
RPHLAADPLVAAAAIVTGLQTVVARNVDPAESAVVTVGRLRAGDALNVIPADAEIGISVRSFAPQVRALL
KERITALATGIAQAHGTRAEIDYVEGYPVLVNDPEAVALAAQVATDLVGADAVDLEHPRLMGSEDFAYML
QRCPGALVRIGNGPADGGRGLHNPKYDFNDCNLPYGAAFWSQLAQRFLC
>gi|319760912|ref|YP_004124849.1| hypothetical protein Alide_0176 [Alicycliphilus denitrificans BC]
MLTPTRRLALAALAITPSLLAALPAAAQDAQPVRLIVGYAAGGPVDQGARLFGQALSKELGMPVMVENKP
GANATIAGNEVVRAKPDGLTLWFAASPTITISPNVMTKMPFDPAKDLAPVAPILSYYNVLVVNNNEPYKN
VRELVAYAKANPGKLAYGSAGVGGSNHLGALLFARRSGIEMNHIPYKGNAPAMTDVIGGQLNMMLDIIST
ASSYIHSGKVRAIAVTSPQRNASLPDVPTFAESGIEGLKGFDVGGWYGVYGPKGMAPELVAKLNKATNAA
LAQPDLKKRYKDLGYDEWTGNPQKLAERAAKERAMWATVTQGITVD
>gi|319760913|ref|YP_004124850.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MAERIHQLLDRWLAEAPGQPFIHLPDGRSLSFADLGALTDAAEAELRALGVRAGDRVLVVAENCPEHAAL
ILACSRVGAWSCGVNARMAPGEVDAFAAKADARVLYFTASSSRSAAAHAARHAAVASVLPGMQHGAARDE
ATVEPPPLQDDVAALIFTSGTTGAPKGVMVTHEALIHFARVSAASRGLGPQDRCYAFVPMTHIFGLATVL
LTSLHAGAQLVLRPQFDPEDLLDALAHHGVTQLQGPPALFSRLLAHLRERSIAHPEAPLLRYVYTGAGPL
DLTLKQRVEAAFGQALHHGYGLSEYAGSVHLTRLSEQRPDTSVGYVVQDAEVQVTDPASGRPVPTGERGE
LWIRGRGLMRGYFRDPQATNAVMRDGGWYASGDLGELHADGALFVVGRLKEMIIRSGFNVYPAEVELALN
QLPGVQRSAVVGRPEKDGNEEVIAFVELSAGATFDEAAARARLREQLAPYKQPSHIVTVAELPTSHNGKV
LKRRLQEQAAKL
>gi|319760914|ref|YP_004124851.1| hypothetical protein Alide_0178 [Alicycliphilus denitrificans BC]
MPIHMTRRSLVAGGLLAAAAQPFAALASDAWPTKPVRFIVPFPPGGPVDTTARAASVKLSEIWKTPTVID
NRAGAGGVVGAQAAAREAPDGYTLFMGAIHHSVNPTLMGNLPYDIERDFAPISFAAMFPVFIVAHQSVPA
NTLKELIALARKPGSNLSYGSSGNGGGTHLAGELFNMEAGTKLQHVPYKGSAPAMNDLLGGQVQLMFSDA
PTALPHIKSGRIKVLAVASRQRSAMLPDVPTAAEAGLPGYEAYSWAALFAPAKTPQAVLDKINADFNTAF
RDPAVRQRLLDAGAEAAPGTQQEMRQFLRSELAKWAKVIKTAGITAG
>gi|319760915|ref|YP_004124852.1| extra-cytoplasmic solute receptor [Alicycliphilus denitrificans BC]
MRTFTRRHFLQSAGATCTLAGLPAWAADAFPAKPLTLVVPYPAGGASDASARIFAESFTQSLNQQVIVEN
YGGGTGLIGANKVLSAPADGYTFLHGSPNEVILPPMLNPAARYKPWDFVFAAPITTASIVLLVRNGIPVG
TMDEFLDYARQQKDKPLTYASVGIDSLYHLMGDALAMRLNLPFLHVPYKGAAPALQDLAGGQVDFGILPY
QTSFDGMQAQGRLKVISSFSKDMAPGLKHIAPITQSKQIPDFVHEIGGGYFMRKGTPADRVAALRKAIGE
AVVKPEIRSRLEAEGRKVAQPTETQAQADAAFKEMTDRIAALLKVLGRKNLAL
>gi|319760916|ref|YP_004124853.1| amidohydrolase [Alicycliphilus denitrificans BC]
MDPSVSTALLHAMRALSPEFIAIRRDLHAHPELAFEERRTSDLVAERLAAWGYQVHRGLGGTGVVGTLRK
GGGSRSLGIRADMDALPIQEKTGLDYASRHVGKMHACGHDGHTAILLCAARYLAESADFSGTLHLIFQPA
EENEGGALRMVDEGLFTLFPCDEVYALHNSPGLPVGQMAISPGPLMASFDRATVTLRGRGAHGAMPHHGI
DPMQCAASITLGLQSIVSREIDALKSAVITVGSIQAGEAYNVVPESAQLKIGVRTLDPRVRTLVEQRIRE
FIAAQAQSYQLQAEVVYERKYPVLVNHAVQTEVLRQAAMRLVGADSVVERPPVMGSEDFAYMLEHRPGAY
IRLGNGTGEDGGCNVHNPLYDFNDNALPIGAALWVHLAQSSLV
>gi|319760917|ref|YP_004124854.1| hypothetical protein Alide_0181 [Alicycliphilus denitrificans BC]
MLASDTTYQPLPMHLSAQTHYQAELDAGRFCIQRCPQCQNHVFTPRELCPHCGAGGLRWVRASGLGTVYS
TSTIARKQDAGGNYNVALIDLDEGVRMMSRVEGLAPEGVAIGLRVQAHVAQKDGRGLVLFQPAAQGGAA
>gi|319760918|ref|YP_004124855.1| thiolase [Alicycliphilus denitrificans BC]
MSRIPRSHLDAAAVNRPLRGRVAIAGAATYGCGEAPGMDDMTLLVRAAQAAVADAGLSMQDIDGLATCSV
NASMWPMPVIEHLGINPTYVDGTMIGGSSFIAHLLPAIRALEAGQCKAVLVCYGSAQRSATFGRKESQAA
RRFLDPQPYEFPYEPVLPVTAYALAAARHMHEFGTTRTQLAEVAVAARAWAQQNPEAFMRDPLTIEDVLA
ARPIASPLTVRDCCLVTDGGGAIVLTRAERARDLPRPPVYVLGNATAIWNRQISCMPDLTTTSASQSGAQ
AFAMAGLKAADMDMAQVYDAFTINTILFLEDLGFCAKGEGGAFVENGGIAPGGRLAVNTNGGGLSCVHPG
MYGIFALIEAVRQLRGEAGARQLKRHSTAVVHGNGGTLSSQSTAVLGTTETL
>gi|319760919|ref|YP_004124856.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MIRDPEILEALLDSVRRFVRERLVPAENEVAETDEIPETIVQEMRELGLFGMTIPEKFGGLELTMEEECR
VLLELCQTAPAFRSVIGTTVGIGSQGILMDGTPEQQAQWLPKLATGEVIASFALTEPEAGSDAASLRTTA
ILQGDHYVVNGTKRFITNAPHAGMFTLMARTNPQDKGAGGVSSFIVDAKSPGISFGKYDKKMGQRGAHTC
DVIFDNVKVPAANLIGLKEGQGFKTAMKVLEKGRIHIAAVAVGVAKRILRDALAYALERKQFGQPICEFQ
LVQAMLADSQAELYAAECMTIDAARRRDDGHNVSTEASCAKMFATEMCGRVADRAVQILGGAGYMAEYGI
ERFYRDVRLFRLYEGTTQIQQIIIARNMVRAARAA
>gi|319760920|ref|YP_004124857.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MSEAGLPPDRNAFMRLIGAAQVPAPPGKVHMRLPHMREELLNQLPAAHGGVVMTLLDSVMARAAAELPTA
PSRTAVTVEMSSRFHRPARGALLAEGWVVHASRSLCSCAAQLLDADGRLVATASGTFKYWLGKTSAGHPP
SGG
>gi|319760921|ref|YP_004124858.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MPPSHPVNGAQSVERACALLRRIAAGHAEGVPLRRLVDDTGLDRTTAWRLVSSLAAQGLVHKDEATGLYH
LGLEAAALGAACMDRSPLVRACLPAMKALARLSGDNVFLVVRSGDHSHCLHLEEGEHRVRSFALNVGGTR
LLGQGVGSIALLARLGDDALVAHYRRHEAEYQADDVGLARLRRWAVQTRDCGHSYGSSGGVAGIGLGFRV
GSCADAALSVIAPRSRLPRSRGAELALAMRREMGAWRLL
>gi|319760922|ref|YP_004124859.1| hypothetical protein Alide_0186 [Alicycliphilus denitrificans BC]
MTANIDRRHLVQGLAAATALTALGARAQATPFPSRPVTLVVPFPAGGATDSLVRQIAELAGRELGQPVVV
ENKPGAAGVLGANHVVRAAPDGYTLSVLPEPVFRLPHLQKTAFDPMNDFSYVIHLSGYALGIAVRNDAPW
RDWAGVVAEAKKRPGQISYGTTGINGTMHVTVEEMAQRAGVRLNHVPYKGESEIIAALMGGHIDLGVTAG
GIAPMVDDGRARVLVLWTARRAPRWPGVPTLREIGIDMVANSPFGIAGPKGLPPAVVKTLHDAFRKALEA
PATRATLERLNQESAYLDSEAYAAFARERYETSRQQVQRLGLKPNAQQ
>gi|319760923|ref|YP_004124860.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MNYRSIYRPGLFAGQVIAITGGGSGIGRCTAHELASLGASLALIGRNADKLQAVAGEIGQPDRVSTHACD
IRDEEAVRATVAAIVARHGRIDGLFNNAGGQFPAPLRDISQKGWEAVVRNNLTGGFVMARECFTQWMEAH
GGSVVNVIADMWNGMPGMGHSGAARAGMLNFTETAACEWAASGVRVNAVAPGWIASSGLDTYPDAFKARI
QTLARKVPLQRLGTEAEVSAAVVFLLSAAAAFVTGTTLRVDGGVPNAKHTWALPAHANSQPYDGFPLYQK
PGFLES
>gi|319760924|ref|YP_004124861.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MLQAPNPRHYTAEHETLRATVRRFFEKEVAPHVSAWDEAGGFPRDLYRKAAEAGLLQLGFPEAYGGVECD
AFHRMILFEERAWGGSGGVASGLFSHTIGAPPIAVAGSEALKARVLPGILAGEQISALAITEPGGGSDVA
QLATTARRDGGHYVVNGSKLFITSGMRADWFTVAVRTGGPGAAGVSLLLVPGDTPGLTRSPLQKMGWWAS
DTAEIGFTDCRVPVENLLGDEGQGFAILMRNFNHERLALAAAACGYAQVCLHDAVAWARERRTFGQPLSE
RQVIRHRLVDMATRIEATRALLDDLASRLDAGESPAAQIAMAKNFATRTFQFCADAAVQILGGMGFMRGT
RVERLYREVKVMMIGGGAEEVMKDLIAKRLGL
>gi|319760925|ref|YP_004124862.1| methylcrotonoyl-CoA carboxylase [Alicycliphilus denitrificans BC]
MIPFASHIHPASEDFQSQRAGMLGLVGQLRALEQRAADASARAASSFAKRGALLPRERVARLLDPGMPFL
PLCNLAGYGMDDPDPERCIPGGSQIAGIGFVSGVRCMVVATDSGIDAGALTEAGNQKLMRCQDIALENRL
PFVHLVESAGSNLRKYRVDKFIRGGGMFYNLARLSASGLPVVTVVHGSSTAGGAYMPGLSDYVVMVRGRA
KAFLAGPPLLKAATGEVATDEELGGTAMHASVSGLAEYVAEDDAHAIALARDILATLDWNDGMPAPGPDA
EPPHLDPDELAGVMVLEHRKPVDMREVIARLVDGSRWMDFKPDYGAATVCGHGRIEGHAVGFVSNNGPID
PAGATKAAQFIQLCNQSGTPLVFLQNTTGFIVGRTSEEAGMIKHGSKMIQALANSRVPQITIHCGASFGA
GNYGMCGRAFRPRFCFSWPNARTAVMGGEQAATTLEIVARQQAERKGAPVDEDRLAAQKAEIVANFSAQA
SAFYTSGHLLDDGVIDPRDTRAVLAFVLATAREAEARQPRAVQFGVARF
>gi|319760926|ref|YP_004124863.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MLYTPEHHELMASIRRFIAAEIDPFVDEWEANEIFPAPELFKKMGRLGFLGITKPEAYGGMGLDFSYALA
AAEAIGHARAQGVGMGIGVQSNMATPALAAFGSDELKREFLAPAIAGDVVVSIGVSEQGAGSDVSSLKTR
ARRDGDDYVISGSKMWITNGTQADWICLLCNTSDGPVHKNKSLIVVPLKENGKRAKGVEVQKIKKFGMWS
SDTAQIFFDEVRVPVRHRIGEEGMGFIYQMKQFQEERLDGAARRLASIDLINETADYLRQRIAFGRPLLD
NQFIQYKLAELKTELEALRSLTYRATLAYVNGEDVIELASMAKLKAGRLGREIADWCMQFQGGMGYTWDN
RVSRAYRDYRLGSIGGGADEVMMMVIARKMGLMDMGA
>gi|319760927|ref|YP_004124864.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MSSAPPVLLRREHDVLFATLNRPETRNALAPEVVAALMQAVAQAESDAAVRALVLRGAGGFFCAGGNVGN
FQARLDADAAGEDPVAARNREFGRFMQRLAALPVPVIAVVEGAAMGGGMGLACAADLVLATQDAKFALSE
TSLGIIPAQIAPFVAARLGRRAALRLGLFGERVAGGAAQALGLVDELAFDGAALDALLAQWLTRLCACAP
GANRALKPLLRRCGREDDGALLDDAARLFAACMRSEGAEGIAAFREKRPAAWRHEFTADAVRS
>gi|319760928|ref|YP_004124865.1| carbamoyl-phosphate synthase l chain ATP-binding protein [Alicycliphilus denitrificans BC]
MTPCKQIRPFHTVLVANRGEIAIRIMRTARRLGYGTVAVYSEADRDGPHVHAADRAVCIGGAAPRDSYLN
IPALIDAARRAGADAVHPGYGFLAENADFADAVDAAGLVFIGPAGAAIRAMGNKAQAKRLVLAAGMPCIP
GYQGADQGDAALLAAAADVGFPVMVKAAAGGGGRGMRLVPDAGALPQALASARSEAEVAFGSAELILERA
VLAPRHVEIQVLADSHGHVIHLGERDCSVQRRHQKVIEEAPSPAVDAALRARMGEAAINAARAIGYIGAG
TMEFLLDRDGRFYFMEMNTRLQVEHAVTEAITGLDLVEWQLRVAAGEPLALAQDDVRLDGHAIEVRLTAE
DVPAGFLPQTGPVLRWRPPPQEGGVRVDHGLVEGGAVSPHYDSMVAKLVAHGRTRDEARRKLLRAVGQCV
LLGLPSNQGFLADCLADPAFADGGAVHTGFVQERFGERLSERPQPPLRTLALAAFAALAGAMPHQEDGRI
RPAVLGGQAARVGLAQGDARWDAQLAAGGEGWQLAVQGGSFALRDAAWEDGARATLRVECDGITERIVVA
PQGDALHCFHAGRAWSFERVSERKRRGAEGGSGAVTAPLTGRIVDVAVRAGDAVQAGQRLLVLEAMKMEH
TLTAPLAGVVAEVCAQAGGQSAKGALLLRIEEAA
>gi|319760929|ref|YP_004124866.1| hypothetical protein Alide_0193 [Alicycliphilus denitrificans BC]
MKTKTVRIGGASGFWGDSAIATPQLLQVPGLQYLVYDYLAETTMSILARARAKDAALGYATDFVHAAMAP
NLRAICERGVRVVANAGGLNPEACRDALAAVAAAQGLAPRIAVVTGDDLMPQFEQLRAAGLRDLHTGEAP
PAALYSANAYVGARGIAQALALGADIVITGRCVDSAVVVGVLAHEFGWGWDDWDRIAAGTLAGHVIECGA
QATGGLFTDWQQVPGWADMGYPVIDCAADGSFVLSKPEGTGGLIHPGAVAEQVLYEVGDPAHYLMPDVTC
DFRQVHVEALDAGHVRVAGARGRPPTGSYKANGTWRDGYQLQLMMAIRGIDAPAKARKTADALLARTRAL
MREQGFADYTETCVELLGCEALYGPNARALPTREVVLRIGARHADPKALAFLQRECASAGTSMGPGTRSS
FAGRADVQPVIKVFSFLVPKDQVALQVVLGERVEPVALPAAAPAVAAAPLPAPPAAAPVVHDGIDVPLVA
LAWARSGDKGDDENIGVIARRPEFLPLLRAQLTPERVKAWFAHLVQGEVERFEVPGLQALNFVLHQALAG
GGVASLRSDPLGKSFAQMLLDWPVRVPRRWADDGLLAPHHLLAD
>gi|319760930|ref|YP_004124867.1| hypothetical protein Alide_0194 [Alicycliphilus denitrificans BC]
MQSMIRRNLLAIGLGALAFAATPAWAQDNYPSKPIRVVVPYTPGGVSDTVTRLVMQKLSDRLKTPVIVDN
QGGANGQIGSAMVARSAPDGYTLLVVVAGHAINPSLYAKMTYAPLTDLRGVSEFGAIPLLMVSSAALPPK
DLKEFVAWAKANPTQATFASSGTGSGAQLSAELFAQTAGVAMTHIPYKGMAPALPDLFSGQVAMAFDSVQ
TMMPQVRSGKLRALAMTSARRWPAAPEVPTMAEQGYPSLTGGSWIGLLAPAKVPGDIVRKLSSEMQKVID
APDVHAKLIEYGIDPVGGTPEQFDAFIQSEARRWADVVKKANIRLE
>gi|319760931|ref|YP_004124868.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MASILEDVKVLDLTRVIAGPLCTQILADMGATVYKIEKPGEGDDTRRMGPFLPDAATGADSNDSALYLAY
NRGKRSVTLDISTPEGAALARQLASRCDVVVENYKAGSLAKYGLDEASIRALRPDIVYCSVTGFGQDGPY
AARPAYDFILQGLAGVMSTCGHPDGAPGAGAMRTAIPITDVVTGLYATIGILGALHHRRETGQGQHVDAA
MLDASVALNGHLALGYLMTGKVPARVGNTNPIASPSEVFDCADGQLIVAVGNNGQFQALCGVLGCPQWAQ
DARFATNARRVAHRAELRDLLAPLLCGRARAELLAAFEQAGVPSGPINDMAQVFEDPQTRHRELAFTLPH
GRGAEVPSLRNPIRYSQTPMRYRAAPMLGQDSEEVLAQVLGLGPDHLAYLRKRAII
>gi|319760932|ref|YP_004124869.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MAMHFDLVDLRLMVHIADANSMTRGAELSFISLPAASTRIKNLEESIGTKLLYRTSQGVTLTPPGQAFVT
HARMVLGQIEHLRGDMQEYVRGIKGHVRVFANTTSLGEFLPPVLRHFLRRNPDVNIDLRERLSHDIVRAV
TEGQTDIGIVAGLVRTENLETLPYRRDRLVLVVPRGHPLDGQMQIDFSDTLELDYVGLHESSAIHAFLRQ
ASDQLHRPIKQRIQVGNFETACRMIEAGVGVGVLPESAASRHAHAMDIAIVPLSDAWSVREMQICVRSLE
ALPSFAQELVELLVADAQGRLQLDR
>gi|319760933|ref|YP_004124870.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MTAADTSSSAATGALSHLRVLDLSRVLAGPWCTQNLADMGADVIKIEKPGDGDDTRHWGPPFFPDAEGKP
TSHACYFAACNRNKRSVTVDMATPEGQQLIRELAMQSDVVVENFKTGGLKRYGLDYASLSALNPRLIYCS
VTGFGHTGPYAPRAGYDLLIQAMSGLMSITGHADGEPGGGPMRVGVAVIDLFTGMYATTAILGALEARHR
TGRGQHIDMALLDVAMAILANQGAGFLNAGNVPKRQGNTHPSVVPYQDFPTQDGNMLLAIGNDGQFARFC
EVAGVDWASDERFTQNAGRVIHRDTLIPMMAALTRTRSTAEWVRLLEDKAVPCGPINHIGQAFDDEQVRA
RSLRIVQERYPGAQPPAGETVNRVVTTASPLRLSDTPVTLRHAPPALGQHTDEVLRERLGLDAARLQELR
AKGVL
>gi|319760934|ref|YP_004124871.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MQFELKDLRLFLLVAQRGSLSRAAEQLHLSLAATSARVKALEERVGMPLLIREARGVRLSPPGEAFLFHA
RAILQQARQLQAELQEYGAGLRGHLRVFANTTAVTDFMPDILAAYLTAHPHISVDLEERPNARIAEDIRE
GRADLGIVAGEVDTHGLQSLHFSTDRLVLVTPPTPAWRAIQEIPFAQVLHENFVGMHRTSTLQTFLDGMG
QQLGHTLKLRIQLASFDAMCRMVAAGVGIAVVPESGAMRYAQGAHVHQVQLMDSWAVRPRYMLVRTLQGL
PAHAQALMAAVQAHHAARA
>gi|319760935|ref|YP_004124872.1| twin-arginine translocation pathway signal [Alicycliphilus denitrificans BC]
MRRADFAIITRRALCAGAVLGWALTAAPGACAQGAYPSRPIVMVVPQAAGGTNDIVGRVVAQKLAEKLGG
SAVVENKPGAGGNIGTQAVARAPKDGYTLLMTISSSQAINPALYKAPGFDPVADFQPISLIGAVPNVLLA
HPSFPAKTVPELLALAKSQPRTLQYASAGNGTLNHLLGEMLNQMAGIELQHVPYKGVAPALNDVLGGQLP
LLFGSLPSTLAHIKAGRLRALAVSSPQRSPVLPDVPALAEFVPGYSGTLWIGLFAPAGVPNEALARLQDG
MRQAMADKELRDKLEAQGVELAGTANKPVTPNEFAALLKQDIAKWAQIVKTSGATIN
>gi|319760936|ref|YP_004124873.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MPRPLDGITVVSLEHAVAAPFCTRQLADLGARVIKVERPGSGDFARGYDQRVRGQSSHFTWINRSKESLA
LDVKHPQAKAALMQLLKTADVLVQNLAPGAAARMGLSHEALKEHNPRLIVCDISGYGADGPYRDKKAYDL
LIQSEAGFLSVTGTPETPSKSGISVADIAAGMYAYSNILSALLLRARTGEGSHIDVSMLEAMGEWMGYPM
YYAYQDAPPPPRTGASHASIYPYGPFTAGDGGTVMLGLQNEREWKTFCDAVLQRPEVATDARFCSNAQRN
QHRSELQALILEVFAALTAAQVVERLDAAAIANARVNDMAGLWAHPQLKARQRWRSVGTPAGEVPALLPP
GVNSAFDYRMDAVPAVGQHTAAILAALGWTDGQIDEVITPSPSGEG
>gi|319760937|ref|YP_004124874.1| glu/leu/phe/val dehydrogenase [Alicycliphilus denitrificans BC]
MTSPSGTHPLPSYLDPNHLGPWGVYLQQVDRVTPYLGNLARWVETLKRPKRALIVDVPIELDNGTIAHFE
GYRVQHNVSRGPGKGGVRFHQDVTLSEVMALSAWMSIKNAAVNVPYGGAKGGIRVDPKTLSRGELERLTR
RYTSEIGIIIGPSKDIPAPDVNTNAQVMAWMMDTYSMNVGTTATGVVTGKPVDLGGSLGRVEATGRGVFT
VGVEAARLTGMPIEGARVAVQGFGNVGGTAGRLFSEAGAKVVAVQDHTGTIHNDKGLDVPALLAHVQQTG
GVAGFAGAEPMADDAFWGVACDILIPAALESQITKDNAGRIQARMVIEGANGPTTPEADDILHDKGVLVL
PDVIANAGGVTVSYFEWVQDFSSFFWTEDEINARLVRIMKEAFAGVWNVAQENKVSLRTATFIVACKRIL
HAREMRGLYP
>gi|319760938|ref|YP_004124875.1| transmembrane pair domain-containing protein [Alicycliphilus denitrificans BC]
MNATRTARGLQGPWRRLVFVSLYELIAILASSLLFMAIGQGAGASGAMAVVASTLAIVWNVTFNHLFEKW
EARQSVKGRSAMRRVVHAMGFEGGLALALIPLMAWWFGVSLWEATLMEAGLLLFFLVYTYLFNWAFDRIF
GLPASAQPA
>gi|319760939|ref|YP_004124876.1| methionine synthase [Alicycliphilus denitrificans BC]
MSAVTPPPMKLSGLEPVFIGEGSLFVNVGERTNVTGSKAFARMILGEQYEQALSVARQQVENGAQVIDVN
MDEAMLDSKAAMVRFLNLIASEPDIAKVPVMVDSSKWEVIEAGLRCLQGKGIVNSISMKEGVEEFKRQAK
LIKRYGAAAVVMAFDEQGQADTFARKTEICQRAYRILVDEVGFAPEDIIFDPNIFAIATGIEEHANYAVD
FIEATRWIKQHLPGAKVSGGVSNVSFSFRGNDPVREAIHTVFLYHAIKAGMDMGIVNAGMVGVYDDLDPE
LRARVEDVVLNRRPDAAERLLEIAEAAKGAAKDDSKKLEWRGTPDNPRPVGERLAHALVHGITDFIVADT
EEAYQQIVVQGGGRPLHVIEGPLMDGMNIVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPYIEEEKRQQE
AAGLDVSSKGKIVVATVKGDVHDIGKNIVTVVLQCNNFEVINMGVMVPCHEILARAKAEGADIVGLSGLI
TPSLEEMQYVAGEMHKDDYFRIKKIPLLIGGATCSRVHTAVKIAPQYEGPVVYVPDASRSVSVAQSLLGE
GKDAYLAEVQADYDHVRELHAKKKKVPLWPIEKARANAARLDYVPVVPRALGRRVFRNFDLAEIAKYLDW
GPFFQTWDLAGAFPAILDDDVVGEEARKVYADGQAMLKKIIEGRWLQANGVIGLFPANRVGDDIEFYTDE
TRTQVLMTWYGLRQQTEKQVDAEGRLRPSRSLADFVAPKESGIADYAGMFAVTAGIGAEKKEKEFLDALD
DYSNILFKGLADRLAEAFAECLHERVRKDLWGYGADESLSNEDLIKEKYQGIRPAPGYPACPDHTAKIAL
FDTLQAREIGMDLTESMAMFPASSVSGFYLAHPQATYFVVGQIGDDQVQDMAARRGMDVEELRRRLAPNL
G
>gi|319760940|ref|YP_004124877.1| crispr-associated protein, csn1 family [Alicycliphilus denitrificans BC]
MRSLRYRLALDLGSTSLGWALFRLDACNRPTAVIKAGVRIFSDGRNPKDGSSLAVTRRAARAMRRRRDRL
LKRKTRMQAKLVEHGFFPADAGKRKALEQLNPYALRAKGLQEALLPGEFARALFHINQRRGFKSNRKTDK
KDNDSGVLKKAIGQLRQQMAEQGSRTVGEYLWTRLQQGQGVRARYREKPYTTEEGKKRIDKSYDLYIDRA
MIEQEFDALWAAQAAFNPTLFHEAARADLKDTLLHQRPLRPVKPGRCTLLPEEERAPLALPSTQRFRIHQ
EVNHLRLLDENLREVALTLAQRDAVVTALETKAKLSFEQIRKLLKLSGSVQFNLEDAKRTELKGNATSAA
LARKELFGAAWSGFDEALQDEIVWQLVTEEGEGALIAWLQTHTGVDEARAQAIVDVSLPEGYGNLSRKAL
ARIVPALRAAVITYDKAVQAAGFDHHSQLGFEYDASEVEDLVHPETGEIRSVFKQLPYYGKALQRHVAFG
SGKPEDPDEKRYGKIANPTVHIGLNQVRMVVNALIRRYGRPTEVVIELARDLKQSREQKVEAQRRQADNQ
RRNARIRRSIAEVLGIGEERVRGSDIQKWICWEELSFDAADRRCPYSGVQISAAMLLSDEVEVEHILPFS
KTLDDSLNNRTVAMRQANRIKRNRTPWDARAEFEAQGWSYEDILQRAERMPLRKRYRFAPDGYERWLGDD
KDFLARALNDTRYLSRVAAEYLRLVCPGTRVIPGQLTALLRGKFGLNDVLGLDGEKNRNDHRHHAVDACV
IGVTDQGLMQRFATASAQARGDGLTRLVDGMPMPWPTYRDHVERAVRHIWVSHRPDHGFEGAMMEETSYG
IRKDGSIKQRRKADGSAGREISNLIRIHEATQPLRHGVSADGQPLAYKGYVGGSNYCIEITVNDKGKWEG
EVISTFRAYGVVRAGGMGRLRNPHEGQNGRKLIMRLVIGDSVRLEVDGAERTMRIVKISGSNGQIFMAPI
HEANVDARNTDKQDAFTYTSKYAGSLQKAKTRRVTISPIGEVRDPGFKG
>gi|319760941|ref|YP_004124878.1| crispr-associated protein cas1 [Alicycliphilus denitrificans BC]
MIGRIVEIADDRRHLFVNRGFLVVRDTEGERKELGQVPLDDIAAVIANAHGLTYTNNLLVALAERGAPFV
LCGPNHNAMGMLLPIDGHHVQAKRIEAQIAASLPVHKRLWAAVVKSKLEQQAAALEAAAAPTAPLLALVS
KVKSGDPENIEGQGARRYWGLLFGNTFRRDQNGDGVNALLNYGYTILRSATARAVVAAGLHPSIGLHHSN
DSNAMRLVDDLMEPFRPVVDLKVWQLLAQGEAHVTPETKRALVRVLYDDMQTSVGVTPVMVCMQKLAISL
AQVYLGERTKLDLPLQGLPLALAGSSESD
>gi|319760942|ref|YP_004124879.1| crispr-associated protein cas2 [Alicycliphilus denitrificans BC]
MWMVVMFDLPVVEKSERRAATGFRNALLDLGFEMSQFSVYMRFCTSQTQVDTLCRNVETALPPGGKVHIF
QFTDKQYERAITFHGQRRQPGQKAPDQFDLF
>gi|319760943|ref|YP_004124880.1| conjugation trbi family protein [Alicycliphilus denitrificans BC]
MSQDDSPDLAPQAGKVVPEAVALRAQPRPVTRLNRRTLVMLTGGLSVAVLGATIWSLQPHRRAGEQTELY
NVDRVSKSEGLDGLPSDYSKLPKVPELGPPLPGDLGPAIVKSQQPVAPTYAPPGHDPEDARRKEAEAAAA
SSVFFRSGTPGKTAAPATAQVAAAGQASALAGFDPLAAGPASTAAQPADPTAVQNRQDQKEAFLKGGSTE
TRNSGNLKMPSSPYQVMAGTVIAGALVTGIKSDLPGDVIATVTEPVYDTATGKFLLIPQGSRILGKYNSQ
VSYGQSRVQVVWNRIILPDTSSLTLDNLVGTDPAGYSGLEDGVDYHWSRIVAGAALTTMLGVGAELAAPE
NRQDGNRIVIAGRDSAQDSINQVGQEMTRRNMNIQPTLTERPGLPVRIIANRDLVLRPYQPMFFQRGAIR
>gi|319760944|ref|YP_004124881.1| p-type conjugative transfer protein trbg [Alicycliphilus denitrificans BC]
MNDLFRKSVLPVILLALSACATQGKPPPSISLDEPVQAQPLPEPPAPVEVVAMPQVLPMPAQMKPVPDAK
PAAEPADETVRVSRANAEARIAPTREGYVNAIQVWPFTDGALYQVYAAVGRVTVIALQPGEELVTVAAGD
TVRWIVGDTSSGSGDALRVNVMVKPIRSGLKTNLVITTSRRTYLIELTSTEKTWMASVSWEYPKDKMLAL
QRQAQAASAAAPVDSGLSLEKIRFRYAVSGSNPPWKPLRAFDDGEKVYIQFPPGIAQGELPPLFVIGAQG
DGQLVNYRFRSPYYIVDRLFGAAELRLGGDKGDVVRIERTDGTRRN
>gi|319760945|ref|YP_004124882.1| conjugal transfer protein trbf [Alicycliphilus denitrificans BC]
MQFKRPQVRYADTPQPATPYQSAAQVWDERIGSTRVQAKNWRFMAFGCLTLAVLMAGGLVWRSAQSIVTP
YVIEVDNAGQVRAVGEAAAPYKPSDAQVAYHLGRFIGLVRSLSIDPIVVRQNWLDAYDYTTDKGAVVLNE
YARVNDPFARIGKESVTVQITSVTRASDTSFNVRWTETRFVNGALDRTERWNAVVSIVQQTPRTEQRVRK
NPLGIYVNGLSWSRELEGNEGAKP
>gi|319760946|ref|YP_004124883.1| p-type conjugative transfer protein trbl [Alicycliphilus denitrificans BC]
MNDVSVIDRFLDVFSRYIDSGFGLLHGEVAFLTATLIVIDMTLAGLFWAMGHASGQGEDVISKLLRKVLY
VGAFAYIIGNFNMLASAVFRSFAGLGLTASGSTLSLGNFLQPGRLAKVGIDAGAPILEQIKEMAGFPEVF
IHIMPIVVLFFAWMVVIVSFFVLAVQLFVTLIEFKLTTLAGFVLVPFALWNKTAFLAEKVLGNVVSSGIK
VLVLAVIVGIGSGLFSEFNIPAGSEPSIDRALVIMLASLAMLALGIFGPGIATGLVSGGPQLGAGAMAGA
AIGAAGTAVAVGAAAAGVGSAVTAGARMAPAAARSMTSTASIARSAYQAGSASAGGGLKGAAAGVGNVAK
TGARAAGQKVADGARSMKERMAAAFGPDDAQASSAASAGPDAAGSSPPVEQPAWAKRLHRRQQLTHAATT
AAHTLRGGDGGSSSQGPSLRDSDS
>gi|319760947|ref|YP_004124884.1| p-type conjugative transfer protein trbj [Alicycliphilus denitrificans BC]
MKRRLLAAAVAAMLCTATAHAQWVVIDPTNLIQNTLTAIQTLEQIYNQIKQLENEAQMLRNQARNLASLP
SSVVGQLRANLATTQRLIAQARGLAYDVTNLDREFQRLYPEQYAATVSGNQMYRDAQERWKNTLNGLQTT
MQMQAQASQNLSDDESVLADLVGKSQSAVGALQAMQATNQLLALQAKQSIQTQRLNITQDRAASLELARQ
AAAVERGREVNRRFLGGGTPYTPQTVDFYSR
>gi|319760948|ref|YP_004124885.1| cage, trbe, virb component of type iv transporter system, conserved region protein [Alicycliphilus denitrificans BC]
MLNLAEYRQRPALLADWLPWAGLVAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATAARLNNALRRLG
SGWALFIEAERRAAADYPHSEFPEPLSWLVDEERRATFEDSGNHFESGYHLTLVYLPPEESRARAAGMLY
ENRPTEGVDWRERLTAFVAETDRVFDLLDGVMPEIAWLDDGQTLTYLHSTISTRRYRVSVPEVPFHIDAL
LTDSALVGGLAPMLGDQHLRVVSVRGFPTSTWPGILDDLNRLGFGYRWSTRFLCMDKADAEKELSRLRRQ
WFAKRKNVIALLRETIFQQETPLVDTDASNKSADADAALQELGSDQVAFGYVTTTVTVLDADPAKADEKL
RMVERVIQGRGFVTIPETLNAVEAWLSSIPGHAYANVRQPIVSTLNLAHLMPVSAVWAGPEKNSHLDGPP
LIVTRTEGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLATLAMQFRRYRGSRIFAFDMGRSMRATILGLA
GEHYDLGMDGEIAFQPLARIDREGYRTWAAEWIEGRLRHEGVAVGPDEKVAIWSALGSLAGAPVEQRTMT
GLSVLLQSNSLRQALAPYVLGGAHGKLLDADHDRLGMADVQCFEMEELMHSKAAVMAVLHYLFARFDERF
DGAPTLLILDEAWLFLDDPVFAARIRQWLKTLRKKNVSVIFATQSLADIKDSSIAPAIIESCASRIFLPN
PQATEPQIRAIYEGFGLNSRQIEIVATGQPKRDYYYQSRLGNRLFDLDLGPAALAFAGASTPQDQRDIDA
VLAASSAVTPFAAAWLRHRGLHWAADLLSTFPSTHLQENPS
>gi|319760949|ref|YP_004124886.1| conjugal transfer trbd transmembrane protein [Alicycliphilus denitrificans BC]
MNGPHDGMPGFEVPLHRSLTEPILMGGAPRTVAITNGTLAAAVGLGLQLWIPGVVLWIAGHSLAVWGARV
DPQFMAVFARHIKHRPLLDV
>gi|319760950|ref|YP_004124887.1| conjugal transfer protein trbc [Alicycliphilus denitrificans BC]
MTHVDAFRISANPLPRPARLHGLARPAIQGLMLAAFMLLLAGTAQAAGSSMPWEGPLQSILESIQGPVAR
IVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV
>gi|319760951|ref|YP_004124888.1| p-type conjugative transfer atpase trbb [Alicycliphilus denitrificans BC]
MSAVPSFTAVSLDRRIQMLRTAMGPLIAAALEDPDVVEVMLNPDRTLWIDRLSSGRAPMGVELSEADGER
IIRLVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPAFALRKRAFGVIPLSRYIEDGMMTAAQA
GLLVRAVRERQNILIAGGTSTGKTTLANALLAEIAATGDRVLVLEDTVELQCAARDHVPLRTRQGVVSMT
ELVRSSMRLRPDRVVVGEVRGAEALDLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALI
AEAVNVVIHIAGRGRKRRIESIARVIGFDGVGYHLADALEAPFPELLPQSDLSSPSPDHSGELP
>gi|319760952|ref|YP_004124889.1| copg/DNA-binding domain-containing protein [Alicycliphilus denitrificans BC]
MTQHRLNVFIQPEHGKRLDELAAKKGVSKSSIVAAALASWLSPDAADQREAAIAKRLDRLSRHAERMERD
LNIQIETLALFIRYFLTVSTPVPEAHQDAARAQGKARFEQFVEQLGRHLLRGRSLVRDVVEELHPDPARM
DDAQERAS
>gi|319760953|ref|YP_004124890.1| trag family protein [Alicycliphilus denitrificans BC]
MMQGTNVLFGQIAVVFGIVIAGVWSATQWTAAALGYQLRLGSPWFDFFGTPVYHPWRLFEWWFVFDAYAP
RVFDTGGAIAGGSGLLAVVVAIGMSIWRSRQSRLVTTYGSARWANADDIRKAGLTQPTGVFLGQHDHQYL
RHEGPEHILTFAPTRSGKGVGLVVPTLLSWPASAVIHDIKGENWQITAGWRSRFSHCLLFNPTDSQSAAY
NPLLEVRRGVHEVRDVQNIADILVDPEGALEKRNHWEKTSHALLVGAILHVLYAGEDKTLCGVANFLSDP
ACPFELTLHRMMTTLHLGDRSHPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRI
ADLIAAEHPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIERRHKLLLMLDEFPALGRLDF
FETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLGTATELRAQR
NYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDEAVVMVSSVAPIKAKKLRYYADANFKRRVLPPP
VLAGGQYADAPPLRPDDWSGLAIPAVPAAPATASADGLGSTDEGGPRRQPELSETVAYDPELAAPAADLG
LLDDDDDLPLPLPRQLDPAMQRTARLASLDPDDGIDL
>gi|319760954|ref|YP_004124891.1| lipoprotein [Alicycliphilus denitrificans BC]
MNLSKIIAMSSLAVLLVACGKSEPSKPAAVPSVEELAADPVRLRELRQQCKTDRPTMGDVLCNRVAEATN
RRFLGDGKVPYTPPKEPPKF
>gi|319760955|ref|YP_004124892.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MELRHLRYFLAVAEELHFARAAERLHIEQSPLSRAIRELEEELGAQLFVRTSRSTRLTLAGKLLMENAPR
VLLALDQARESVKAAANGFHGRLRVALSDGITPSRLPALLARCREEDPEIEIRLFEVPLAQQLSGLRDDL
YDAGFSMADEVGDGIIIEPAWEDELMVAMPARHELLAHRRVPLDEVLQHPLVLGDPAVCEGHAKQIDRIL
RKQDREPLIEQYVATFDVMMTFVSAGLALGLAGAAHIASSREPGVVGRPLAGKSPMLTTYLLRRDAEPSQ
ALARFIERVEALGPGDA
>gi|319760956|ref|YP_004124893.1| heavy metal efflux pump, czca family [Alicycliphilus denitrificans BC]
MFEKLIRAAIEHRWLVLLAAIGMAAVGVFSYQKLPIDAVPDITNVQVQINTQAPGYSPLETEQRVTYPIE
TVMAGLPNLEQTRSLSRYGLSQVTVIFKDGTDIYFARQLVNERIQEARDKLPVGITPALGPISTGLGEIY
LWTVEAKDGAKKPDGMPYTATDLREIQDWIIKPQLRNVPGVTEINSIGGYAKEYQIAPIPARLASLGVTL
QDIVTALDRNNGNVGAGYIEKRGEQYLIRAPGQVKTLEDIGNVILSSAGGVPIRVRDVADVGLGRELRTG
AATDNGREVVLGTVFMLIGQNSRTVSQAVDKKMVEINRSLPEGVHAVTVYDRTVLVDKAIATVKKNLLEG
AILVIVILFLFLGNIRAAIITATVIPLSMLFTFTGMVHYKVSANLMSLGALDFGIIIDGAVVIVENCVRR
LAHAQAHYGRPLTRTERFHEVFLASKESRRALLFGQLIIMVVYLPIFALTGVEGKMFHPMAFTVVAALVG
AMILSVTFIPAAVALFIGHRVSETENFLVVQAKRWYGPLLDRVMAAKAVVLAAAAVAVVLCGLIATRMGS
EFVPSLNEGDFAIQALRIPGTSLSQSVAMQQRLEATLKAKFPEIDRVFARTGTAEIASDPMPPNISDGYI
MLKPVSEWPEPRKSRDELLAAIQEVVGKVPGNNYEFSQPIQLRFNELISGVRSDVAVKIFGDDMDVLNKT
GEEISSMLQKIPGASEVKVEQTTGLPMLTVNIDRQKASRYGLNVADIQDAVATAIGGREAGTLFEGDRRF
DILVRLPESLRNDLESMKRLPIPLPRGTGGTGSAEGRTNFIQLAEVASFELAPGPNQVSRENGKRRIVVS
ANVRGRDVGSFVADAEAALAQVKIPTGYWTSWGGTFENLQSATQRLQIVVPVSLLLVFLLLFAMFGNVKD
GLLVFTGIPFALTGGILALWLRDIPLSISAAVGFIALSGVAVLNGLVMISYIRSLREDGTPLDEAIREGA
LTRLRPVLMTALVASLGFIPMAIATGTGAEVQRPLATVVIGGILSSTVLTLLVLPILYRLAHRPDEQEED
VTAEPAHEGVTA
>gi|319760957|ref|YP_004124894.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus denitrificans BC]
MKPETNKLNVGKKQWIAIVVIAAVGIGLGSAILGGKTGKSAEGEGHGSHVEAKAHSDGEHHGKTGADSHE
DDKGHADGEHHEGSSKGPHGGKLFKEGDFGLEALLAEDGGEPRLRIWLYEKEKALASSAAKVSATVTRLT
GEKQALNFTPDKDSLLSREIVPEPHAFEINIVAQTANAPFTFSFSQEEGKVELSDAQIKAASIGIDTAGA
ASIKSALQLPGEIRLNEDRTSHVVPRIAGVVESVQASLGQTVKKGQVLAVIASPAASEQRSELQTAQKRL
ALAQTTFEREKRLWEQKISAEQDYLQAGQALNEAQVAVANAQQKLSAVGLAPGSSGGLNRFELRAPFDGV
VIEKHLSLGEAVKEDAAVFTVSDLGQVWAEINVPAKDLPLVRVGEKVSIKATAFDASAQGTITFVGALIG
EQTRMAKARVVLANPQGAWRPGLFVNVEVIASETAVPVSVASDAIQSVGDKPVVFVKVKDGFVAQPVQLG
RSDGKRVEVLQGLQAGAAYAAAGSFVVKSELGKASAEHTH
>gi|319760958|ref|YP_004124895.1| outer membrane efflux protein [Alicycliphilus denitrificans BC]
MLKSIHNRRASAVAAGLVFVLTAGTASAQALPAVPGHSRSANGGEQIEAATPLSLQEAIALALEGNLDLT
VAQREIEAVEGQVIQGRVRPNPELAYSLEDQRTPTRTQSVQINLPIELGGKRAARIAAAERGRDVAVEEL
NMRRVEIRAAVVSAFFEALAAQDRTMLAQDSVDLAKKATDAVAKRVTAGKVSPVEETKARVAEAGVRVEL
AQAQSEQRSTRARLAGLLGANPPRFTQVAGSVDDLPAVPSLDDIQQRLSASSALRRAQLEVERRRSLADV
ERSKQTPDVTVSLGVKRPNELARNQLMLGVSVPLPLFDRNQGNLLEALKREDKARDELQALNLRLSTEVL
QARERLTLVRGEIDVLQREVLPGAKSAYDAATVGFGYGKFNFLEVLDAQRTYFAAQSQYLKALAEAHRAA
ADMDRVIGASEPTITPPANKE
>gi|319760959|ref|YP_004124896.1| hypothetical protein Alide_0225 [Alicycliphilus denitrificans BC]
MRKWLAIVLLVFLPLQFSWAAVASYCQHETGAAAKHFGHHAHQHKAADGKDASPDPAKTLGGDPDCASCH
AGCFSVLSGDVKLASSISPSLDTAYHPESLAAPPPERLERPRWRALA
>gi|319760960|ref|YP_004124897.1| hypothetical protein Alide_0226 [Alicycliphilus denitrificans BC]
MKLTHLVAMKAIILATALPMAAQADSLWHPASNEQGFTYHPDHFKSTKTRAQVLAEVEAARKDGTLTLMQ
GGLPVPIKSSAAPKTRQQVVDEMRSESPEARRARLEMYSGG
>gi|319760961|ref|YP_004124898.1| heavy metal response regulator [Alicycliphilus denitrificans BC]
MKLLIVEDEAKLADYLRKGLSEEGYVIDVAVNGIDGLHMASDGHYDLIVLDTMLPGIDGFGLLAALRQNK
QTPVIMLTARHRIEDRVRGLKTGADDYLVKPFAFSELVARIEVLLRRAAGTAPAPDALVLCLGDLQVDLA
RRRATRAGQRIDLSAKEFQLLTLLLRRKGEVLSRTEIAEQVWDVNFDHGTNVIDVAVRRLRSKLDLPFER
PLLHTVRGMGYVLEDRQS
>gi|319760962|ref|YP_004124899.1| heavy metal sensor kinase [Alicycliphilus denitrificans BC]
MDTLRQQQTQVNHLIAEAAELDSGTLAHKLDDGMVGRQDMKLILTRADGSVIYASAGIPVHHRVIDMRFE
ATTGIPPIQAVLSLDVSEDDRVLERLARTLVAAALAGAVVIAAGGFTLVQIGLRPVRDLSAQIQALEADT
LHRLLDGSAQPDELAPLVAHVNELLKRLHKAYEQLEAFNADVAHELFTPLATLMGGTEVALRKARDADTL
RDVLGSHLEDLQRMSMIVQDMLFLSQADRGAEARREHVASMAGVARTVVELHEAAIEEAGLKVRINGDAT
GLADVRLLQRALSNLIGNATRHAHPHSTVVVQIDRLDGEIALRVVNEGQTISAEHLPNLFNRFYRADAAR
SDAARNHGLGLAIVAAIARMHGGRTMVDSSNGITSIGLMVPTPRAQ
>gi|319760963|ref|YP_004124900.1| transporter [Alicycliphilus denitrificans BC]
MVISAWIYTLIPAAAAIIGAAVAVNVRPGPTLVSAIQHFAAGVVFAAAAGEILPDIMHRASPWATMIGGG
IGVATMLLVKHLEALAKGPAGLLTVIGIDILIDGLVLGIGFAAGPKVGLLLTIALTIEVLFLGLTVATEL
GESVRSRARVVWITAALVLLLPIGALLGAPVALLPNPLLTGFFAFGLIALLYLVTEELLIEAHETPDRPW
VTAMFFVGFLALLLLEEVIG
>gi|319760964|ref|YP_004124901.1| hypothetical protein Alide_0230 [Alicycliphilus denitrificans BC]
MGILDRIFGGHGGGHGSSHGHGNSRGHGSPSSHDWGHNPAPSVSGITCPQCKAINPNGARFCGQCGTSLV
PASCTKCSSVIPIGAKFCAQCGNAVT
>gi|319760965|ref|YP_004124902.1| heavy metal translocating p-type atpase [Alicycliphilus denitrificans BC]
MDCASEESEIRRALEGMAGIRGLRFNLGDRELAIAADDHALPQALEAIRKAGFKPEPLGAKNAQRFRIAN
MDCASEESEIRRALDGMAGIRSLQFNLGDRELAIAADDPVLQQAVDAIRKAGFKPEPLGDTGSSAAAAAV
ASPTGFWTTWGKSLGALGLAVAAEGLAFAFPDSVPVKALGMALAAAAIALSGFSVYGKGLAALRQGRLNI
NALMTVAVTGAFLIGQWPEAAMVMALYAIAEAIEARAVDRARGAIKSLLALAPEQAEVRQDDGSWARIGV
KEVTVGATVRIRPGERLPLDGIVTLGQSAIDQSPVTGESLPVDKSPGDEVFAGTINQAAALEIRVTAPAS
DSTLARIIHAVEQAQSSRAPTQRFVDRFAAIYTPAVFVLAVAVALLAPWLMGLTWMQAAYKALVLLVIAC
PCALVISTPVTVVSGLAAGARRGILIKGGVYLEEARKIKAVALDKTGTITEGKPKLVAFEPVDAGLGQQV
LEGLAKSLAARSDHPVSKAIADGVSSAAQEVDEFQAVAGRGVQGVIDGHTYVLANHRWIEERGQCSAELE
ARLAVHEQAGRTVTLLASSERVMAICAVADTIKPSSAQAVADLKALGVTPVMLTGDNLATAQTVGAQAGI
AEVRGNLLPEDKLRAIGELQQRLGVTAMTGDGINDAPALAKADIGFAMGGAGTHTAMEAADVVVMNDDLR
RLPETIRLSKRTHAVLWQNIALALGIKLVFLLLAIFDDASMWMAVFADMGASLLVVFNGLRLLRQRAGQ
>gi|319760966|ref|YP_004124903.1| cd(ii)/pb(ii)-responsive transcriptional regulator [Alicycliphilus denitrificans BC]
MKIGELAKAAHTQVETIRYYEREGLLPETARTDGNYRMYAEEHVDRLSFIRHCRGLDMTLDEIRVLLRFK
DAPHENCAQVNDLLDEHIDHVATRIKELKALERQLKTLRESCRESQQASQCGILTELSSASRQVHEPATR
RGHVHGAHSLK
>gi|319760967|ref|YP_004124904.1| hypothetical protein Alide_0233 [Alicycliphilus denitrificans BC]
MTDRRDDDFRIRPSAPKNRGQGFVSKVLKQAGKASSGKSSVRRPGASGSGQRAGQRPGSRLGRGHTAARF
AGAKLTPMSRRVAIKTLLVNQQRASPQSLAKHLRYIERDGVGRDGEPGQAYGPQTDTADLDAFKERCADD
RHHFRFILSPEDGAELEDLRTYTRHLMGRMEADLGTRLEWVAVDHWNTDNPHTHIVVRGRDDTGKDLIIA
GDYIADGFRHRAAELATEWLGPRTELEIQQTLRREVDQERWTNLDRTLKRELGDDGLVHVERLNESRLQR
QCLLLIGRLQRLQRLGLADETQPGTWAIHADAEKTLRALGERGDIIRTMQRAMRGEPRELAVFEPGDDGR
TIVGRVAAKGLADELRDRGYLVIDGVDGKAHYVALNARDELANYPAGAVVEVKGSADVRAADKNIAALAS
DGLYRTDHHLAIAQGQAAPGRDPQEVVAAHVRRLEALRRTGIVERVAEGLWKVPDDLPEQGRQYDAQRLG
GVAVELKSHLPIERQARVIGVTWLDQQLIGGGSGLGDLGFGGEAKQAMQQRADFLAEQGLAERRGQRVIL
ARNLLGTLRDRELAQAAKDIAADTGLEHRPVADGQRVAGIYRRSVMLASGRYAMLDDGMGFSLVPWKPVI
EQRLGQQLAATVRGGAASWEIGRRLGVSLS
>gi|319760968|ref|YP_004124905.1| hypothetical protein Alide_0234 [Alicycliphilus denitrificans BC]
MMAADSLHVAVHLVVPSGVSCCWPSPCRSACSASASAPHFALPSAQPSNVQASCLERARSVAVFAFAGAL
AARAAAPPGRRCPERQRGAKAEGKTKGCGTCRPAKPVCTWGWRGTERLRRRAAWGAKPAPMQACPRASHD
RTRQSLQGAQP
>gi|319760969|ref|YP_004124906.1| peptidase s26, conserved region protein [Alicycliphilus denitrificans BC]
MTFPSAVAGAAGIPPRPRSRLRARIVLAGLSACGLAALAWASFVQPMPRLIYNPSDSVAVGWYRVDPLGH
DTGSLPRPLSVGSIVLTTLPPDAAALAAQRGYLPARVPLLKRVGAVAPQEVCITGRVVRIDGVPSAAVLP
ADRWGRPLPSWQQCRHLEPGELFLLSVTNPASFDSRYFGPVSTSAVIGVAHPVWLESRP
>gi|319760970|ref|YP_004124907.1| hypothetical protein Alide_0236 [Alicycliphilus denitrificans BC]
MTASVSSAAAPVACAATAALAAPSGQPASAPLTRVALAYIEPRFKLYLRFGEPARTLQLDRWRRCAVFLP
GAMLCRIRWQANDYGTIRWQLMVMQACTPLDAAQRIPGVQPGARLLLHAEGENQVRAVLERIDAIEALGI
APNGASPAYWRTLANRLAARLPLPEYTAERHAAWLTGRALS
>gi|319760971|ref|YP_004124908.1| hypothetical protein Alide_0237 [Alicycliphilus denitrificans BC]
MTAKPPPNGKRTAKRVSIGARPPANPHAEAWIRQGDADALGKGDLYTARLTLDITPAMRARIKVSAFTQG
VTVADLLRGLLEREFPEHRRENTP
>gi|319760972|ref|YP_004124909.1| cobyrinic acid ac-diamide synthase [Alicycliphilus denitrificans BC]
MIVALLNQKGGVGKTTLATHIAGELAMRGQHVVLLDADPQGSSLDWTQRRSQQGLPRLFSAVGLARETLH
QEAPELARRADHVVIDGPPRIAALARSALLAAERVLIPVQPSPYDLWASAEMVALIREAQVFRPALRAAF
VINRRVSTTVIGREARQALADQPLPALRAEVHQRIVFADSVAAGRLARETAPDSAAAREITALVDELLRW
TP
>gi|319760973|ref|YP_004124910.1| replication initiator protein a [Alicycliphilus denitrificans BC]
MSKPLQEREQLDLFRALPGDMAPRDSQDLMAFPFFSLAKSRRTAPIDFRASNVTIRVEGTAEHGIATIWD
ADILIWAASQIVEARDAGLRPSRLMQVRPYEVLRFIGRGTSLRDYQRLKAALDRLQSTTVATSIRETTGR
RLHRFSWINEWKELADASGTPLGLELILPDWFYAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGR
QPGGWQFDFQHLYRKSGSVARYYDFAADLRALVARQALPGYLLGIEHVSGISSPLLTFRPVPQTARG
>gi|319760974|ref|YP_004124911.1| hypothetical protein Alide_0240 [Alicycliphilus denitrificans BC]
MRPAPLRPAATVSTAAAQPQRYLTNDEAAEYLRLSPRTLEKQRVIGGGPRFRKFGRRVMYAVADLDAWAA
DRSFETTSDPEYAEHHSADSRAR
>gi|319760975|ref|YP_004124912.1| hypothetical protein Alide_0241 [Alicycliphilus denitrificans BC]
MVSPHHFAHWYPTAAYLYVLWLDTLALAWEYLRRHPDYRLDWLRRARRPDAAHRWGLRLLEDPALDARDA
HPAWQPGHAAVVQLHPDADPPVDAESFAFWRIPGHKQLLHDGKRLALIAHSPGHCLRFALAPGLEDGMAV
AYAVRTDATASPRYRACGTTLATPAAVALPRPAPVALLELHTLQALDATLAGASLREVGEGLFGVDAVAD
WYADGGLRSKVRRLVRRGDALMRGGYRRLAQLPPLEKGRFDADAKRP
>gi|319760976|ref|YP_004124913.1| lipoprotein [Alicycliphilus denitrificans BC]
MNAPLVTDAQRAALLANGRRVAAAEPHDPLPVVRLFTPDAHAIWLLASLDPADGDTAFGVMDVGIGMPEL
GHIKLSDLTSIVGPNKQPVMRDLYFQAVHPLSEYLRLAQENGSIVD
>gi|319760977|ref|YP_004124914.1| helix-turn-helix domain protein [Alicycliphilus denitrificans BC]
MQKRSIQRGRPTGATTYDAELAQAFGAAVRALRTERGIAQESLAHLAGIERSHMGKVERGEHMPTLAIIF
KIAGALECSTAVLMSEAESQLAAAAQP
>gi|319760978|ref|YP_004124915.1| hypothetical protein Alide_0244 [Alicycliphilus denitrificans BC]
MANIGTFTADKDGFNGQLRTLTLNVKVKLVPNDKGNNESAPDFRLQAAGHDIGAAWKKTSEAGRPYVSVT
LDDPSFPATVYARLIENEDGTHDLIWSRNKPKAA
>gi|319760979|ref|YP_004124916.1| phage associated protein [Alicycliphilus denitrificans BC]
MTIRESGADSTWHRAKEIVEAQGNDAQFVNISQNIASKLAVAQANRTIPGGIVVVIEGTCGNPAKSFMCV
IKAEPHGGFTKRQAGGHLTLEYIKELILTPQAKLYKIGAFLRQDPAAATPQEPTTGWRAFLFDDLITQGN
KLAAAQYFYESFLGLEFPSNSAFQTKQFHALTKDFIRNANVDSEKKIDLLNALTTYLKTDQAATIQVDVF
SQNYLGDAALQDAYTAYMGQKSFPNTAIHKDLSEVQSQLRLRKLTFGHDIKLTAPADQFENYVRIESIDG
DADEHGNVPKWTKITVRDHIRDQE
>gi|319760980|ref|YP_004124917.1| rela/spot domain protein [Alicycliphilus denitrificans BC]
MVPRLKGDTSLIDKALYRSKPYKNPYEDITDKVGMRYVVLLTTHINTFCSIIESRECEAFWSWSKDKDYE
EERLAKPLEFSYQSVHYVLRSKAELSVDGVNLPEGLACEVQIRTLLQHAHSELTHDTLYKPKTTAKPSIK
RTVAKSMALIEATDEFFEQAMKDLASASEPQRQLLDYLSTTYRKGTGLEPGQERSNQLVVDAFMEFLPQE
TSARIEEFLTAKNYIFEKIKEQNGQRHFFNQPAVLLAYFLVEKMPAQTRENWPIDSDDLAKIFSDLGAAF
>gi|319760981|ref|YP_004124918.1| hypothetical protein Alide_0247 [Alicycliphilus denitrificans BC]
MTRITTSRPRMAAIYAPGTVRARRWHGAGDVRGYRPPSGWSARADLTDIHPITGRALPRAVWWLIETKE
>gi|319760982|ref|YP_004124919.1| parb domain protein nuclease [Alicycliphilus denitrificans BC]
MNAITQTEARAVNTAAAIPLEAADPTKNLILVPLSRLVLRPTGRNVRKTPRMSIPELAASIRRVGLLQNL
IVIASADGEHYEVVAGGRRLAALKLLAKKHRISKEWEVPCLLVADGTARTASLTENVQREAMHPADQFEA
FAALVAEGRPIEDIAADFSVTPLVVQRRLKLANVSPRLMADYRADAVSLDQLMALAITDDHAAQESAFYD
APTWQRHPSNLRERLTEREIDAYRHPLVRFVGLDVYEQAGGRVRRDLFAEGDAGVYLTDAALLERLVQDK
LAGIAAETKAEGWAWVDAAPAATYADLQAFQRAPRERREPNKREAQRIEKLQAKMQEVAEAVDAAMDADD
ENKADALQEEGETLGEQLQALEDGLQDYSPNVKAAAGAIVTIDRNGEAIIHRGLMREAEAKALRTLERLR
QGFSGEDAENDDEGEDDEQPKTAAMPDRLAQRLSAHRTAALQIEVARHPQVALAAVVHGMVQTVLQESRY
GHDLPLGVGLKVQDRLEGMAPDWPESPAAVALRELQQVAGEGLPEDSAALFAALLAKPQDELVRLLAVCV
ASTVDVVTPRATPHQPGAELAQAVGLDMAAWWQPTAEGYFKHVSKAVILDAVGAFAPESVTRLAKLKKAD
IASEAERLADGKGWMPAIFKATGPQDVAQEAGPEQDAPEDAEAMADEPAEALAA
>gi|319760983|ref|YP_004124920.1| hypothetical protein Alide_0249 [Alicycliphilus denitrificans BC]
MQLASRFASRSPSLRSDYPLSDDQIRSVAPSIFADAPHESRSERYSYIPTAAVLTELRKEGFQPFMVTQT
RVRDEGKREHTKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVP
HKGDVAGSVIEGAFEVLSGFERVKESRDLMRGITLDDGESEVFARAALALKYDDPDKPAPITESQILMPR
RFDDRRPDLWSVFNRTQENLTKGGLHGRSANGRRQQTRPVQGIDSDVRLNRALWMLADGLRQLKA
>gi|319760984|ref|YP_004124921.1| hypothetical protein Alide_0250 [Alicycliphilus denitrificans BC]
MDKQILENHINSLKKACDACRSQLDTGAMKELDREVSKLEQLCDQLQSATDAETLKVRTLQVIAAFVSIA
TNIRDWL
>gi|319760985|ref|YP_004124922.1| helix-turn-helix domain protein [Alicycliphilus denitrificans BC]
MNIGQAIQLARSKRKLSQAALAKRAGISVSYLSLLERGRRDPPLSTLQRIAAALVMPVEILFFLGAEEGE
LGHLNRDLAGQLAITALELLNGPLPDQAEVSV
>gi|319760986|ref|YP_004124923.1| retron reverse transcriptase [Alicycliphilus denitrificans BC]
MDLYPIKPRYRSNPVKSIAALARGLRWDAQSLVELADRANGMWRTVKPKPGSTRQTFDAMGQLKEIHQRL
KLNVFSKVDFPEYLQGSLKGRDYVTNASIHKGKQILICEDVKGFFPSVSAAFVEDVWCGFFRFSPDVAKL
LTRLTTKDGYLPQGAITSSFLANLVMWRYEPWLHAKFAQRGITYSRYVDDMAMSSATHLDKETQTWIIAQ
VYGMLAQHGLKASRKKHEVFSASQPMIATKLTVNRKPSLSPKKQSKVRTRVRQLEIAATSGASTDELREL
ANKAAQQVGQLGRFHKTPAAKLKSRIAVVRDNLSPEALSVTTAPAKVRLDTVPLVTDARPWE
>gi|319760987|ref|YP_004124924.1| transcriptional regulator [Alicycliphilus denitrificans BC]
MRSRPHDDAMAELFRDDPALALEVINGILADGDQAELMAVLRQLAQAVGGVQAVAEQAHLNPTQLYRTLS
PKGNPALSSLSAILKAMGLRLAVQPLALPPSAHAA
>gi|319760988|ref|YP_004124925.1| addiction module killer protein [Alicycliphilus denitrificans BC]
MYRIEHYLTVDEQKDVYDDWLRRLRDAQAKVAVIRRVTRVEQGNFGDHKFCRDGVWELRIDAGPGYRVYY
GLAGHRLVLLLCGGDKRTQDADIARAVAYWQDWQQRGDE
>gi|319760989|ref|YP_004124926.1| integrase family protein [Alicycliphilus denitrificans BC]
MAKIKLTKSAVDTAEVTGKDYELRDTIVPGFLCKVTAHGRKVFMLQYRTNWGERRKPKIGQFGELTVEQA
RSIAQDWLADVRKGDDPSAAKLAARMAPTVKELCEQFIEEYSRPRNKPRTVDSYQGYIDRHILPALGKLK
VPDVTRAHITTLMKDKARIGVTANRVLACLRKMFNMAEVWGYRPDGSNPCRHVPKYREDGETRYINNEEL
ARLYAYLDRADAQGLEHPTVTLAVRLQFEFSARMTEIRTLEWAWVDFENRRVVWPDSKTGDMSKPMSEAA
YQLLRNAPRIDDSPYVCPAIFDAKKPLPDSTYYNGWKRILGRAEVAHVGTHGIRHRAATDIANSGIPIKV
GMALTAHKTVTQFMAYVHAEDDPVRAAAEKVATLRRGAIDGQAQAAPTPTAPASVLAVADGEKTRTSQGN
YRPYRHRKSPTRAVPPGTKRAGSPSTKAPETAIA
>gi|319760990|ref|YP_004124927.1| shikimate kinase [Alicycliphilus denitrificans BC]
MQTRCALVGMPGSGKSTVGRQLARRLGLPFIDLDQRLEQQLGTSIRNYFEQHGEQAFRDHESALLAALAD
EPGGMILSTGGGAVLRPENREALRRSFPHVMYLRASPEEIFRRIKHDRTRPLLQVADPLARLRELYRDRD
PLYRETARYVIETGRPTVNTLVNMAMMQLEMAPGKPDLNT
>gi|319760991|ref|YP_004124928.1| ribonuclease bn [Alicycliphilus denitrificans BC]
MQNLNQGARRLMQPAAPLLRAVQLWLDAEGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWVDKAYLESSLV
AQVQGVMGERGAEVVRMALASAKAPAQGWLASIAGFVLLLSGATGVFAELQSALARLWVHGRAAPERKPW
WHMASLRLRGLAYVLAIGFLLLISLVLSTAIKVLATWAGALLPFGAGVLLQFVNEAVAFAVAVLLFVGLM
RIGSGPKPPLSCLVLGAAVGAALFTAGKQLLAWYLSTAAVVSAYGAAGSLVVLLMWIYFSSAVLLFGASC
ARALDEARTAAGAQPVGQG
>gi|319760992|ref|YP_004124929.1| 17 kda surface antigen [Alicycliphilus denitrificans BC]
MNPATSSQPAASVKWLWAAVGALGVSVLALGGTLLAQNLRGDASPAAQATAAALRTPESEIIDEKAPQGQ
AQQALAATDSRAVQSRRAPMPQADSYLQPAAQSRPAAPVCASCGRVESVQAIEQAAPATGLGAVAGGVLG
GVLGNQIGKGSGRTAATVLGAVGGGYVGHKVEERTRTTTVYQMRVRMQDGSVRSFTRSQPVAEGTPVRVQ
GKGFRVDDGSGDADRAGTQPVRVVDRGY
>gi|319760993|ref|YP_004124930.1| ferredoxin--nadp(+) reductase [Alicycliphilus denitrificans BC]
MSAFHEERVLSVHHWTDRLFSFTTTRDPALRFSNGHFTMIGLKVNDKPLLRAYSIVSANYEEHLEFLSIK
VPDGPLTSRLQHIKVGDSIIVGKKPTGTLLIDYLLPAKRLYLMSTGTGLAPFLSVIRDPETYEKFEEVVL
IHGVRQVAELAYHDYITRELPKHEFLGELVTKQLKYYPTVTREPFRNQGRIPNLIESGKLFTDLGVPPLD
PLTDRAMLCGSPEMLASLKTILEHRDFEEGNTTRPGDFVIERAFVEK
>gi|319760994|ref|YP_004124931.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MHKRFTAFVAALAWGLGAAQAQDVYTIGEINSYKAQPAFLEPYKKGMELAVAQVNATGGVGGKKLRLVTR
DDNGNPGDAVRAAEELIAREKVDVLMGSFLSHVGLALTDFAQQKKRFFLAAEPLTDKIVWENGNRYTFRL
RPSTYMQVAMLVPEAAAMKKKRWAIVYPNYEYGQSAVATFKQLLKAAQPDVEFVAEQAAPLGKVDAGSVV
QALADAKPDAIFNVLFAADLAKFVREGNTRGLFAGKGVVSLLSGEPEYLDTLKGEAPEGWIVTGYPWYAI
HTPDHEAFLDAYKKRFKDYPRAGSVVGYNAIQSIAAGLKKAGSADTEKLIAAFRGLEVRTPFGPITYRAQ
DHQSTMGAYVGKTGLYGGKGVMVDFKYMDGAKFQPSDAEVKKLRPAAP
>gi|319760995|ref|YP_004124932.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MDFSGLLAQLLNGLAGASTLFLVAAGLSLIFGVTRIVNFAHGSFYMLGLFAAYSCVEQLAGAIGFWPALL
LAPLAVGLLGALVELLLLRRIYHASELLQLLATFALVLVIKDAALWLWGPEELFGPRAPGLAGAVDLLGR
RFPAYDLFLIAVGPLVLVLLTLLLTRTRWGTLVRAATQDREMVGALGVNQAWLFTGVFALGALLAGLGGA
LQLPREPASLELDMLTIGAAFVVVVVGGMGSIPGAFVAALLIAELKAVCIWLGVVQVGGVAVAFPKLTLV
VEFLVMALVLVWRPWGLMGRPQAAVRAPGAPEALLHGAGARAAAAWAALLVALALLPLAAGQEGYATVLL
TDVAIAALFAASLHFILGPGGMHSFGHAAYFGLGAYGAALLVRWLDLPMGAALLLGPLAAAAGALVYGWF
CVRLSGVYLAMLTLAFAQITWAVAFQWDGLTGGSNGLTGIWPPEWAAQGAAFYWLALALAAAGVYLLRRM
LFAPLGWALRAARDSAPRAEAIGIHVRRVQWAAFVVAGLLAGLAGALFAFSKGGVAPDALWVGKSVDGLV
MVLLGGVQQLAGPLVGAAAFTWLHDSVARATDYWRALLGGTMLVLVLLFPQGISGFAQYWQAKTALKKGV
AA
>gi|319760996|ref|YP_004124933.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MTLLRVENLRKSFGGVQAVQGVSFALAAGELLALIGPNGAGKSTTFNMVDGQLAPDGGRVLLDGQDITGL
SPRAIWRRGVGRTFQIAQTFASFSVLQNVQLALLSHDRKAWRWWRRADAHRPQDALALLEQVGMAAQAHR
PCSELAYGDVKRVELAMALAHAPRLLLMDEPTAGMAPAERLALMRLVQRLARERRMAVLFTEHSMDVVFG
QADRVAVLVRGQLLAEGTPDAIRQDERVQQVYLGQGLQDFEKNSCQRPPAKGSGPKTPEMPGAPLLQMQD
LDAWYGAAHILHGVSLAVGRGEVVALMGRNGAGKSTTLKSIAGLLQRRSGRMAFMGRRIDTLAPHQIARL
GLGYVPEDRRIFTDLTVLENLEAGRQPPRHWPGGQPVPHWTPQRLFALFPNLGEMPNRPGGRMSGGEQQM
LTVARTLMGQPCLVLLDEPSEGVAPVIVEQMARTILALKAQGMGILLSEQNLPFAQAVADRAYVLEQGRI
VHEAPMAELARDVQARKQYLGV
>gi|319760997|ref|YP_004124934.1| peptidase c1a papain [Alicycliphilus denitrificans BC]
MPTYLLRQGSQDPLVARLRKVLVAELGDAAESYPQLDKGGATFDAMLDAALRCWQNGRGLIADGIVGPCN
LLALGLADWPPLDCELNTDSVHALFPATKPVNIARYLGYVTAALRAVGLLGRDMVLAALGTIRAETEGFV
PISEFQSKYNTAPGGAPFALYDGRLGNRRGEGAMFRGRGFVQLTGRSNYETYGAKLGLDLAATPELANAP
EVAALLLALFLDAHRDAMQACLAAGDLKGARRLVNGGSHGLANFQSVFELAQNALPAAAAPAAPPPVGRR
AGGRAGATATRKRAPRGQAAQEPASGRTLNAQADAPDLRDRPYTPPPASLQPEWPTTEAVTQWLPAYAKA
GLVLNQGQEGACTGFGLAGVVNYLRWVRAGLPKAMVSVSPRMLYNMARRYDEYAGENYEGSSCRGAIKGW
FNHGVCLEDDWPYQAAAQLPPHFGFAERARGTTVGVYYRIDTSSISDLQAAIMHVGAIFVSSYVHAGWQE
VATSTLPKGHASLPVIAFDGIPRRDAGHAYALVGYNDRGFVLQNSWGPGWGAHGFAVLSYEDWLQHAMDA
WVVALGVPGLIGGGRNVPLAAGGRAAAGGGWSESQTLDHVISVGNDGRMSRYLTTDERTRNLSYQVSVLP
DQWFRAQPPEGKKRLILYVHGGLNSEADGIKRARSLGRLFEANGCYPLFVVWHTGLLESIRYYLDDWRAG
RPAAAGVKEWATERTDALIESTIGRTVVRALWSEMKENAGYAWQATRAGDLLVRALGELRALWGDQLEVH
LMGHSAGSIWLGHMLTWMAKAQATSGAPGLREAVAGVHLYAPACTVAFANQHFADKALLGRTHVAVLSDD
RERDDNTAYIYRKSLLYLVSNALEQDRRTPLLGLERALTGRNDQNTWDGASTTGETLAIWRRAAAEARLA
SRLKIVSEDKVLTATPDVRIPASHGAFDNDVAIVGATLERICGQPLREPPRDLRGY
>gi|319760998|ref|YP_004124935.1| mg chelatase, subunit chli [Alicycliphilus denitrificans BC]
MSLALVQSRALLGLQASAVTVEVHLANGLPSFALVGLADVEVKEARERVRSALQNAGLEFPTNKKITVNL
APADLPKDSGRYDLPIALGILAASGQIAAERLAGWEFAGELSLSGLLRPVRGALATSLALRAEQPPVRMV
LPPGSAEEAALVPGAEIYRARHLLDVVRQFLPAAAPPQEDDDGWQRLAPAAPAVHTSSPDLADVKGQAAA
KRALEIAAAGGHGLLLVGPPGSGKSMLAQRFASLLPPMSVEQALESAAIASLAGRFTGAQWMQRVTASPH
HSCSAVALVGGGSPPRPGEISLAHEGVLFLDEFPEFARSALEALREPLETGLITISRAAQRAEFPARFQL
VAAMNPCPCGFAGSAQRACRCTPDQVARYQGKLSGPLLDRIDLHVEVPHLPAEDLLNAPAGEASSAVRER
VARAHALALARQGTPNQALQGQQLDRMAALDEAAARFLQTAAARMGWSARGTHRALKVARTIADLAASEQ
VGMAHVAEAVQYRRVLRGTQA
>gi|319760999|ref|YP_004124936.1| conserved hypothetical protein chp02001 [Alicycliphilus denitrificans BC]
MSHASLKSLSLALVAAAMPVLASAELTANVALTSNYKFRGQDQDVHRIKAVSPAIQGGFDYTFGESGFYL
GNWNSSVDWLQGNSIESDLYGGYRFKAGALDLDLGALAYIYPGNTAGNTTELYGAATWGPLTAKYSHTVS
KDYFGWAGAKTSGLRGRNTGYLNLAFAREVAPSVTLKAAVGYTRFAGDIRDLGVPSYVDYSVGGAYDFGA
GLSLSAAVAGANKKGFFGDANKARLIVTLSKTL
>gi|319761000|ref|YP_004124937.1| nitrogen regulatory protein p-ii [Alicycliphilus denitrificans BC]
MKMITAIIKPFKLDEVREALSDVGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIEAAVADDLA
ERVIEAIEGAARTGKIGDGKIFVADLEQVVRIRTGETGGQAL
>gi|319761001|ref|YP_004124938.1| ammonium transporter [Alicycliphilus denitrificans BC]
MRKLLASLALGLHLLAGGTAALAQAPAAAPEPVAAAAAPAPDAAPATAPEAAPAPKVDSGDTAWMLTSTL
LVILMTIPGLALFYGGLGRAKNMLSVLMQVFVVFSLISILWSLYGYSLAFSGEGRLVGDLSKAFLQGVGP
ETFGALATIPEYVFLAFQGTFAAITVALVVGSFAERMRFSAVLIFALLWFTFSYVPMAHIVWGGGLLAQD
GALDFAGGTVVHINAGIAGLVGAYMVGKRIGFGREAFTPHSLTLTMVGASLLWVGWFGFNAGSAGAANAA
AGLAFVNTVLATAAATLSWIAGEAVHKGKASMLGAASGAVAGLVAVTPAAGFVGPMGAIAIGLVAGLVCL
WGVGGLKRMLRVDDAFDVFGVHGVGGIVGAILTGVFAAQGLGGTGGATPETFSMGAQVWIQTKSVLFTIV
WSGVVSVVAYKIADLLVGLRVDEESERQGLDISAHGETAYHR
>gi|319761002|ref|YP_004124939.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MKIPPLNPLKVFEVVARTGNLTLAASELNVSQSAVSRQVAVLEEYLGVQLFTRERVGVRLTEVGEGYARR
IGPAFGEIAAATEAITRKYSNNVIRLRTYTTLTARWLIPRLPHFKARHPEVEVSILNSTAPLDFGAEQCD
LAIVLGDGHWPGAEATLLLEDIVEPVCAPGFIAEGAPPEALRGKRLLVSKYRKDDWPRWLAHAGLPELFE
TAETMVFSSSILTWQAAVDGLGIAIGQQHMLEADFQAGRLVRPLARPLRTGKGHYLVTPALQRYSGKIAA
FKDWLMVEAMKK
>gi|319761003|ref|YP_004124940.1| 2-hydroxy-3-oxopropionate reductase [Alicycliphilus denitrificans BC]
MSGPVLGFIGVGVMGEGMCRNLLAKSGLPVHVADVQAENVARLAAQGAVASSVRALRETAHTVFLSLPSI
DQVEEVCLGADPLVAPGGSVKTVVDMSTSDVPRTRALAGRLAALGVRFLDAPVARSREAANNGTLLITVG
GPADLFETVAPWLRCMGSDVVHCGGVGAGQVVKIMNNMVLLSTVNSLAEAMAIAEAAGVDKALLAGVLRL
GSADSFALKLTGERLATDVFPEKLFPTAYALKDLKLALGLAQASGIQPAVAQATAALLDAACARGYAMNY
YPVIYRLVEKQ
>gi|319761004|ref|YP_004124941.1| aldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MQYSQFIAGGFRQGTSAERFTVIDPSTGQPLGDYAYATPEDVQAAIDAAAKALRSWSRTPAYERATLLRR
VAALMRERGSAIAAQIARELGKPIGEAQKEVVTAAEMFEWAAEEARRIYGRTIPPRGAGITQTMALEPIG
VVAAFAGWNAPAITPSRKISGALAAGCTIVIKPSEETAGVALHIAKAVQDAGVPDGVMNMVFGEPGAIAD
QLCASPQVHMVTFTGATSVGKQIGAKAALTMKRATLELGGHAPVIVCDDTDADRVARAAVATKYRNAGQV
CTSPTRFLVQAGVFDAFLERFVQDAQALKVGDPFDAATQMGPLKNQRRLQSIERIVQDARERGLTIATGG
ERTGTEGFFYRPTVIVRPSLDCDAANIEPFGPVALISPFGDLDEAIAEANRLSFGLAAYAFTNHVRRAHR
LAGEIDSGVVCINEWQASLPETPFGGHKDSGLGSEGGVEGLMEFLRVKCVRQGVQA
>gi|319761005|ref|YP_004124942.1| hypothetical protein Alide_0273 [Alicycliphilus denitrificans BC]
MTSLSKRALVLGAAALTLGGHAFAQGAADWPAAKPVTIVVGFSAGGPTDVVARIVAEQLSAKFKQSFVVD
NKAGASGGVAANLVKQAAPDGYTLMFGSSSTLSIIPTLQKTAYDPLRDFTAIALVASYPYFLVVPASSSI
KSLDELLKQGRAGGSQLSYGSAGNGAVNHLAGEWFKHEAKINAVHIPYKGDSAAVTDLVAGRLDFAFLAG
SVALPQVKAGKMRVLASASAVAGRGGEGVPTLGERYKGFAAEPWNGLMGPRGVPEPIVARLNAAVNEIMA
RPDVLARLAPMEQYAFTGTPRQFTDHIKSQTERWAAVIQSSNIQAD
>gi|319761006|ref|YP_004124943.1| beta-lactamase domain-containing protein [Alicycliphilus denitrificans BC]
MSEYQILAVKYATVDRARGSNFLHSAPGDPDAPMALDFFVWLIDGPGGAVLVDTGFSPASAIARGRRYLV
SPPESLRRLGHAPESIRDVVVTHLHYDHAGNVGEFPAATAWVQDREMRYATGDCMCDPKQNHFFSTDDVA
VLIRRLYQGSVRLVDGFHELRDGIELHRVGGHTDGLQVARVRTARGWVVLASDAAHYYENLALQNPFPAI
FSLPDMLAGYARIRALADGEDLIVPGHDPAVCTRFESAGVPGVHAYRIA
>gi|319761007|ref|YP_004124944.1| urea/short-chain amide abc transporter [Alicycliphilus denitrificans BC]
MTFTPTKAALGAALLAASMLAPAQDKGARISDGIVKIGVLTDINGPFMDNVGKGSIVATEIAIEEFKGKV
LGYPIQMVTADHQNKADVASTRVREWFDRDQVDAVTELGNSAVALAAMRLAQDKNRISIVTGAGAVRISN
EDCTPNNLHWVYDTYSLAKVGTQSVVKGGAKTWYYLTADYAFGHSLENDGRHFIEAAGGKVLGSSRYPFP
GNDFASYIIKAQGSKANAVAIATAGLDLQNAIKQGKEFGLASGGQKTVAMLMSIMDVHGVGLKDAGGMLF
AESFYWDLDDASRAFSRKFFERTKRMPTALQAGQYSATLNYLKAIQKARSDDVADVMKAIKSMPIEDAFA
KNGKVRADGKMVHDMYLVRVKTPKESQAAWDYYTVLETVPGAQAFHSAAESKCPLLKP
>gi|319761008|ref|YP_004124945.1| 3-hydroxyisobutyrate dehydrogenase [Alicycliphilus denitrificans BC]
MKAGFIGLGRMGFALASHLLRNGVQLAVHDIQSAPVDKLVALGASRAASVQALAAGADVVFTMLPGPKQS
REVILGEGGVLAGLRRGGCLVELSTIDTDTVDALAAAAEKQGVRFADAPVGRLAAHADRGESLFMLGAHD
ADRVALEPLLLKMGTTVLHCGAPGSGTRMKLINNLMVLCYCQLNSEVLVLAGALGLDARKTFDVLTGTTA
SNGQLKEKWPVKVLAGDLTPGFDIALGFKDLTLACQAAQSAGVSLPMGNLARSLFQLARHAGKDGQDTSC
MTDFWAESNGQPPVRL
>gi|319761009|ref|YP_004124946.1| alpha/beta hydrolase fold protein [Alicycliphilus denitrificans BC]
MRVEKEAATGGYVNFDIAGRMCRVYYETAGSGQPLLCLHTAGSDTRQYRALLNSPELTANHQVICFDMPW
HGKSSPPEGWHTEEYRLTSALYVQTILAFMDAMQVERPIAMGCSIGGRVVLHLALQCPERFKALIGLQSG
AHVNPYYDLDWLHRPDVHGGEVCAGIVSGLVGPGAPERDRWETLWHYMQGGPGVFKGDLHFYTGEGDLRG
RVQRIDTARCPLYLLTGEYDYSCTPEDSEDLARLIPGAQLQIMPGLGHFPMSEAPQEFLRHLLPVLQRIH
TNEGNT
>gi|319761010|ref|YP_004124947.1| hypothetical protein Alide_0278 [Alicycliphilus denitrificans BC]
MHTTNDDWLAHQGRWVNVTFLLRKGDAEYLVTLRDGRVQRIAPGPHVMPCWTFALVASDDAWERFWAAEP
QPRFHDLMAMVRFKALRIEGDMTVFMRNLLYFKALVKQLGGHIHAR
>gi|319761011|ref|YP_004124948.1| membrane protein abrb duplication [Alicycliphilus denitrificans BC]
MRSTLSKLLTLLLAWAAAEGCRRLRMPVPWMLGPLLATALATMAGQPTRSSLRLRNCGQWVMGASLGLYF
TPPVVAQLIGLWWAVLAAVAWALALGAAYGRWLYRSCAGRLRGVSDAALRPSAYFAGAIGAASEMTLLAE
REGARTDLVAASHSLRMLIVVLVMPFGMLLAKAWWNLETVDLVPPASAPFAAAGLAWLALFTGAGGLALQ
LGRLPNPWFLGPLLVAIGLSATGTAPSGVPTPLSNAAQLVIGVSLGVRFSPLFLHTAPRWLAQVALGTLG
LLAACAAFGLLLAWATGLHAATAILGTAPGGMTEMSITAKVLQLGVPVVTALQVTRLVAVLVLVRPAYRL
WARQP
>gi|319761012|ref|YP_004124949.1| mmge/prpd family protein [Alicycliphilus denitrificans BC]
MPTQDTTAAQRFAAFAASLNDAPLTPEVIHHAKRAIVDWYAALLPGAVESPPTLLERALADDLDRGGARL
ALGRAATVRAAALINGTAAHTVEVDDIYREAIYHPGAPTIAAALALAQARRATGLQMIRAVVAGYEVSTR
IGAALGRAHYRHWHNTGTVGTFGAVSAAATLLGLDAGRHAHALCTGATFAAGLQQAFRMDSMSKPLHAGH
AAEAGVLAALAAEQGVTGSLDVLDGEAGLGRAMSDGPDWQQATATLGQDFHITRMTFKNHACCGHTFAPI
DGALELRSRMGVHWQDLQAVEVATYAPALAVAGNPDPRTAAEARFSIPFVVATALIHGSVRLSAFTPERL
ADADIRALMARIRLAVDPELDARFPGQRAARVGFATADGRQGKYLQPTRKGDPEQPLSDAELSDKFMELA
APVVGEARARALLGHLWALDTREHLLDL
>gi|319761013|ref|YP_004124950.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDFTLSEEHQAFADSVARFAQDKLKDGALARAHSPHYPWETAALLAEQGLLGIAFPEEDHGQGGTLMHAV
LAIEQVALVCPKSADIVQAGNFGPIRTFVEYATPEQKQRFLPDLLAGRKLISLGMSEPDAGSAVTELKTS
ARQEGDGYVINGSKVFSTHSPEADLFLVYVRFGPGVGGIGSVLVERGTPGFQVGEPSSFMNGERWSQLYF
DECRIPAANVLLGPGGFKKQISGFNVERLGNSARALALGRHAFNTAREHALTRKQFGRELCEFQGIQWKF
AEMAMKLEQAQLMLYRAAMEGEHGLPSAQSTAMAKLACNLAGWEVSNEALQVMGGTGFSQECLVEYCVRR
TRGWMIAGGSIEILKNRIAEGVFGRTFPQRPGKG
>gi|319761014|ref|YP_004124951.1| hypothetical protein Alide_0282 [Alicycliphilus denitrificans BC]
MKRSLLSLAALAACAWSIAVPAAADAAYPAKPVRIIVGYSAGGPTDAVARLVAAHLQTKLGQPFVVDNRA
GAGSNIASEAVAAAAPDGYTLLVAAAPLTMNSHVYKNLKFDAVKSFVPISKLSSAPGVLAVRTDWGVGSV
KEFVAAAKKEPGKFTYGTTGLGGSQHMATELFQRLAGVKLTHIPYKGASNVMTDLIAGHVDLAFMTATGA
MPHLQAGKVKPLAVAGPQRLSGLPNVPTFAEAGYPAMISDSWNGLLAPAGTPEAIVKKLHAAAAEALQMP
ETRTKLESQGAIVIGNSPEEFRADIQREVAHWAEQFKAIKIEMQ
>gi|319761015|ref|YP_004124952.1| CoA-binding domain protein [Alicycliphilus denitrificans BC]
MTPDNDKRLAQALLHPASVALYGASDDVDKMGGRPVQFLKRTGFAGRIYPINPRRDEIQGLKAWPSLQSL
PEVPDQVFVLTPTETVIPAVRECAALGVKVVTILASGFSESGAEGAAREGELRRIAKETGIRILGPSSLG
VVNPRTGLVLTANAAFAEPDLPPGKVFVASHSGSMIGALVSRGKARGVGFAGLVSVGSEVDLNVGEICAA
TLDDPAIEGYLLFLESLRHGPELRAFARAAHARGKPVIAYKLGRSAAAAEMATTHTGAIAGEDDIADAFL
KDMGVARVGVLEALLETFPLARRIPLESAPKRVGVVTTTGGGAAMAVEQLGIRGVVVEPPSADALKRLEQ
AGLPCTPGRVLDMTLAGTKYETMKATLDILLTAPEFDLVLAVVGSSARFQPQLAVKPIVECAGGPKPLAA
MLVPDAPEALAALTAAGVPCFRAPEACGDAIAAVLARRRPGPEPVLPAPGPARTLSEAEAYGVLHELGVP
HAPVALRCFGEAPAPLPFAYPVVAKVCSAEIPHKTEVGGVLLNIGSDEELAAALATLRRNLDERAPKAAC
DEVLVQPMQKGLSEVLVGYRVDPDAGPIVMLAAGGIWAEVAKDRSIRLAPVTVETAREMVAEVNALKPLT
GLRGKARGDLEALARTVSALSQLALKPELGIAEAEVNPLLVLPEGQGVVAVDALVFQRTPA
>gi|319761016|ref|YP_004124953.1| fad linked oxidase domain protein [Alicycliphilus denitrificans BC]
MEAALRQIIDRVRDSADRRALLRIRGGGTKDFHGPGAPAHAGEPLDMRPLAGIVSYEPSELVVTALAGTP
LAELEALLAQHGQSLPFEPPRFAPGGTVGGMVAAGLSGPARASVGAVRDYVLGVEIINGKGELLRFGGQV
MKNVAGYDVSRLMAGSWGQLGIITEVSLKVLPVPPAEATLRFDCGQAEALARLHAWGGQPLPLNASCWVQ
DGGGAGRLYVRLRGARAAVQAACRSMGGAPQDAPTVPADWQACRDQRLPWFTARAADHALWRLSVPQTAP
VLALPAGVAPPLVEWHGGLRWVQAPARHGDELRALARQVGGSASCFVAAGADGTGAAALFDANDGALAIV
HQRLRQAFDPAGILNPGRLV
>gi|319761017|ref|YP_004124954.1| hypothetical protein Alide_0285 [Alicycliphilus denitrificans BC]
MRLLRHLTGRYRTPVANRTLGLLLAFNAGGINAGGFLVVGMYTSHMTGIVSTVGDNLVLGNMALVLGALG
TLWAFMSGAGSTAIMVNWARHQHLRSTFALPLLLEAVLMLLFGLMGAITLTWRTPFAVPLTVLLLAYLMG
LQNAVITKMSSAEIRTTHMTGICTDIGIELGKALYWNRGGRPAHEQVHVNHKRLRLFASLLSMFMAGGVV
GAAGFKYVGFIWVVPLATVLLVLSLPPLAADFDRLGLAWRRRSSRGQ
>gi|319761018|ref|YP_004124955.1| hypothetical protein Alide_0286 [Alicycliphilus denitrificans BC]
MQTQLAPEYQGTPEGQEAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGQEPTRKTQL
HLDRCLTCRNCESTCPSGVQYGHLVDIGRRIVEEKVPRPRGEAAVRWALKEGLPSPLFAPAMKLGQAVRG
LLPGRLRAKVPPRQQAGRWPAASHARKVLLLQGCVQPAMAPNINAATARVLDAAGIQTLVAPEAGCCGAV
KFHLNDQDGGRAQMRANIDAWWPYIERGAVECIVMNASGCGVTVKEYGYMLRLDPQYAEKAARVSALTRD
LSELLPDLVPLLKDRVRPAGRAFAYHPPCTLQHGQKLRGGVERHMAALGFTLRVARTESHLCCGAAGTYS
VLNPELSYQLRDRKLGVLGAAFADEPPAAILSANMGCITHLQSGTEIPVRHWVELLDEALLA
>gi|319761019|ref|YP_004124956.1| fertility inhibition fino-like protein [Alicycliphilus denitrificans BC]
MNDSVNALQPSAEAAQPVQPAAPVAAVEAAGNDAAPRRTHPLLEQLAGWYPHLFGMQCLPLKRGIFHDLM
AAHGEAIDKDALKLALSIHTRSTRYLNAVAQGLRRHDLQGQPVEDMAPEHVHHALLEVFRRRKPRDGEDL
ALKLRRRIAQAFEASGLTREAYDALVRGRDEKANALLDEAFAEVAEQGAKAEALLRAFEASGATPEQFAD
MYGMDRRVVTQSLARARRLRAPAAQAAAPGEAP
>gi|319761020|ref|YP_004124957.1| hypothetical protein Alide_0288 [Alicycliphilus denitrificans BC]
MHSPLPALALLFNAFVWGLSWWPFRQMQGAGLHPLWATALMYCAILVAMLALRPGVLAQLRAHPGLWLLA
LSSGLNNVAFNWAITIGDVVRVILLFYLMPAWAVLLAWRILGERPTAQALARLLMAFCGVLLVLWPAEGG
VRRLFAALTLADMLALLGGFMFALTNVTVRRLHAVPGQARMFAMFGGCLLLALLVANLGRSVGLVTAFPP
PDATWITVAALLSLLLMAGNWALQFGAARLAAGTTAVIMLSEVVFASGSSVLLGASRLTAGTLAGGALIL
LAATWSAWRPRARG
>gi|319761021|ref|YP_004124958.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MKRGFYTIMSAQFFSSLADNALFVTAVELLRSSGAPEWQRAALVPMFALFYVVLAPWVGAFSDSMPKGRV
MFISNAIKVVGCLMMLFGSHPLLAYAVVGLGAAAYSPAKYGILTELLPASQLVKANGWIEGLTIASIILG
VLLGGQLVAPHISGVLLDFDLPGVDLGIDLPAEAAILALVPVYMLAAWFNLRIPLTGVEMRPMPRNPVAL
LPDFWTCNRRLWRDRLGQISLSTTTLFWGVSGNLRYIVLAWSAAALGYGTTQASALVGVVAIGTAAGAVL
ASMRMRLEQATRVIPLGIAMGLLVILMNAIHSIWLAVPFLIVLGGLGGFLVVPMNALLQHRGHNLMGAGR
SIAVQNFNEQAAILGMGVLYSLFTKLGLSAHGAIAAFGLLVALVMLAILRWHVHNVRRYPKEMVHLRRMA
RRDRH
>gi|319761022|ref|YP_004124959.1| alanine racemase [Alicycliphilus denitrificans BC]
MPRPILATIHPAAVQHNLERARRAAPDARMWAVVKANAYGHGIERVFEGLRSADGIALLDMAEAERVRRL
GWRGPVLLLEGVFEPRDLELCSRLSLWHAVHCDEQIDWLAAHKTQAPHRVFLKMNSGMNRLGFAPGRYRS
AWARLNALPQVDEISFMTHFSDADGPRGIAHQVQAFHRATQDLPGERCIANSAAILRHGGEAQVRLDWVR
AGIALYGSAPDHPERTAVDWGLEPAMTLASRIIGVQQLQAGDTVGYGSRFTAEGPLAIGVVACGYADGYP
RHCDTGTPVLVNGVRTRTIGRVSMDMIAVDLTPVPGAGMGAEVTLWGRAANGVVLPIDEVAEAGGTVGYE
LMCALAPRVPVSVD
>gi|319761023|ref|YP_004124960.1| cytochrome-c peroxidase [Alicycliphilus denitrificans BC]
MKQKSSPVRHAARFMLGAVSMAALLMAAPVRAQEPVQPIAGPKVTSPAKVELGKKLWFDPRLSRSGFISC
NSCHNLSMGGSDNLKTSIGDKWQKGPINSPTVLNSSLNLAQFWDGRAKDLKEQAGGPIANPGEMAFTHGL
AVDMLRSIPQYVAEFKKVFGHDKLTIDEVTAAIAAFEETLVTPNARFDKWLKGDKKAINAQELRGYQLFK
SSGCVACHNGPNLGGNSFQKMGLVEPYKTDNPAEGRSAVTGNDAERFNFKVPTLRNVELTYPYFHDGAAD
TLSQAVDTMGRLQLGKKFTGQENADIVAFLKTLTGDQPKIAMPILPPSSDKTKRPQPFE
>gi|319761024|ref|YP_004124961.1| glutathione s-transferase domain protein [Alicycliphilus denitrificans BC]
MTTLTLYYAPGTCAQAVRIALEEAQAPYTPVRMDFASQQQRSPEYLAINPKGRVPALVTEHGVLTETPAL
LAYVAQRFVQAGLAPADAFGFARMQEFNSYLASTVHVAHAHRPRASRWADEPEAQAAMQRKVPANMTECF
DVIERHYLGDGPWMLGEQYTVADGYLFTVAGWLKSDGVDIARFPKVHAHSQRMAARPAVQRALG
>gi|319761025|ref|YP_004124962.1| DNA repair protein rada [Alicycliphilus denitrificans BC]
MAKDKTLYSCSECGASSPRWLGKCPGCGAWNTLIETVPDAGPGKNRLSGAGQYAGLAQAQSVMPLAAIEA
TEVARTPSGIEELDRVLGGGVVEGGVVLIGGDPGIGKSTLLLQAMDALQRVGLPTLYVTGEESGAQVALR
SRRLGLEASQVNVLAEIQLEKILATIEATQPAVAVIDSIQTIYSDQLTSAPGSVAQVRECAAHLTRLAKA
TGIAVVLVGHVTKEGALAGPRVLEHMVDTVLYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGV
ANPSAIFLSQHSEPVPGSCVLVTLEGTRPLLVEIQALVDGGGPSPRRLSVGLERDRLAMLLAVLHRHAGV
ACADQDVFVNAVGGVRISEPAADLAVMLSITSSLRGRALPKGFIAFGEVGLAGEVRPAPRGQERLKEAAK
LGFTVAVVPKANAPKKPIPGLEIHAVERVDEAMAAVRGLG
>gi|319761026|ref|YP_004124963.1| hypothetical protein Alide_0294 [Alicycliphilus denitrificans BC]
MTTSSRRHAVLAGALAALALACGPAAQAQEGDFTRIVVGFAPGGAADSLARIYAEQLRQDGLGNVLVENK
PGASSRLALDYVKKAPADGKTVFIGPSPMFTIFPLTYKKLSYDPDKDLVPVALLTDVPTVIATAVNAPYK
TMDQYVQWLKQHPAQGSLGLASIGSAGHLGAFALSKELGLSVTPTPYRGATPMLVDVVSGNVSMGWDAVA
SMMPLYRGNKLHFLGVSGTRRIKALPEVPTAFEQGYKQFEYATSWYGAYVSGATPEPVKARLQEAFIKAS
RNPATAARLEDLGLEVVGKSGAEARERMLKERAAWSPIVKASGFEAQD
>gi|319761027|ref|YP_004124964.1| amidase [Alicycliphilus denitrificans BC]
MPPELWKWPAAELARAIRGRHISPVEATTAILAHMAAQQPRLNCFITVCADQALAQARAAEGALMRGDAL
GALHGVPFSVKDIVNTRDVATTFGALPLRGNVPAEDAVSVARLRRAGAILIGKTTTPEFGSKGFTDAPLF
GATPNAWSPRHTCGGSSGGAAVAVAAGMAPLAIATDGGGSTRIPAACNGVVGIKQTIGVVPHSQALDLFG
NQTYVTPTARTVLDTALMLDAMAGPHPCDPWSQGRAAVDHVQAVRAARDLRGKRFRYNVAPHGRRVSAQV
EQAFRQALLHIESLGGSVEPFEAQLDIEPLWRTVNHTVWRARFAPLVQQHGDALSATFRRQIESAQDYSA
LDYQNAMFARSRLFHTVQGWLDDADFLVMPTLTRTALPLGTDIFDRMEIDGAEMGDIRANWYPWTMPFNM
TGHPAVSIPCGFDSERLPVGLQIVAPMFCDAQMLQAAACLEASFNLLQAWPDMS
>gi|319761028|ref|YP_004124965.1| hypothetical protein Alide_0296 [Alicycliphilus denitrificans BC]
MNLRKIFIPLGIVALAIAGYRAYGLQGILTVSGGLVMWGLLHYTRLMNVMQKARNNPIGYVGSAVMLNAR
LKSGVNLMHVVAMTRALGEQLSAEGQEPEVYRWTDGTQSHVTCEFVNGRLVRWNLVRPAPGEDPAGES
>gi|319761029|ref|YP_004124966.1| branched-chain amino acid aminotransferase [Alicycliphilus denitrificans BC]
MSPVVPSMADRDGKIWMDGQMVDWRDAKIHVLTHSLHYGCGAFEGVRAYKTEQGTAIFRLQEHTDRLFNS
AKILRMKLPFTKEEVNEAQRAVVRANKLESCYLRPLTWIGSEKLGVSPKGNKIHMIVAAWAWGAYLGEEG
MARGIRVKTSSFTRHHVNITMTQAKASSNYTNSILANMEATDDGYDEALLLDSAGFVSEGSGENVFIIKD
GVVYTPDLSAGALNGITRNTVLHICKDLGLELVQKRITRDEVYIADEAFFSGTAAEITPIRELDRVQIGG
GSRGPLTEKIQTAFFDIVNGRNPKYAHWLTKV
>gi|319761030|ref|YP_004124967.1| zinc finger, chcc-type [Alicycliphilus denitrificans BC]
MPQAIVELLAKDLDGNGGVHCPNPKADMKLWNGHPRVFLEIAHQGQAQCPYCGTLYRLKAGEIVHAGH
>gi|319761031|ref|YP_004124968.1| o-antigen polymerase [Alicycliphilus denitrificans BC]
MTTLESFLGAPPWPRQLATAALFLLPALALTVQSGYSYGAALLLIGALCSLRRWPFAAQDRWTWGFAVAM
GGMGVFWWLLANPQESLGGTWDRPSKFALGIACLLFVSPTAPRPRAQFWGLLAGCLGAGAVALWQVHVEG
APRASGFPSGKTNAIQWGNLALLLGTMLAVQAITLREHLGRAALALAGLAALMALNASVLSLSRGGWLAL
LLASPVGLYLLWRFDRRALWRMLGGAAVVLAVLGAANHAVLAERWNVMEKEMLVYDAEREAGNSVGQRLE
HWRFAWEVGLEKPIFGWGMRGYLEEKEKRVAAGQYEPSIVEYIYTHNEPLDMFVKAGIVGVAWLLLFYAV
PLCMFWPTRARVAAYARQGAEVRAQMLALRLGGVCIPLLYAGFGMTQVFFAHNSGIMFYLFMTMLTWAAV
LGMDAQYAGGAGASSSSLPRRGPSSRQSRA
>gi|319761032|ref|YP_004124969.1| glycosyl transferase group 1 [Alicycliphilus denitrificans BC]
MPEIARRPRVLHFVTGGFSGATQVAVDLVRAHALSGRCEALLVLRRKRHTRGERVQALRDEGLAVETVAG
WAHAATVWQLAAVCRRWRPDVLVAHGFSEHLWGRYAGLVAGVPRLVQVEHNSRERYTAWRLRQALWLAGR
TEAIVGVSEGVRQSLLARGFPPGKTVAIPNGIPLAPYDCADGHDWAGRVPGIVMAARFARQKDHATLLRA
VALLRQQGLTPPVKLAGGGKAGARRAARRLCTELGLDGQVEFLGHCKDMPGLLMGHRICVLSTHYEGMPL
SLIEGMAAGCAVVGSRVVGVQEVIEDGRNGLLAGHADPRSLADALERLLTRDDEARRMARAARDDALRLY
GLQTMTARYEDLLLRGLEHPR
>gi|319761033|ref|YP_004124970.1| glycosyl transferase family 2 [Alicycliphilus denitrificans BC]
MKDADAPWLSILVPVYDVQDYLAECIGSVMEQLAQLPDGGAGVEVLVLDDASTDGSRALMDALAARWPGR
LALMHHARNQGLSAARNTMIGAARGEYLWFLDSDDKLLPGALAGLQAAVRRHAPDAVLCDFAVWRERPRL
KHRLRGEAHRATFAGPAGGPFHDRAALLAGLFMTGQLHAWSKITRRALWGADLRFPPGRYFEDMATMPLA
LLRARSHCYLPEPWVAYRQRGSSILATMTLPKALDQSQALGAFAQALRAAEAAGDMPAHADLHFALAHQC
ARSLTGAARFLERAALPVAEREAAAWRLRDDFAAASPLAAEALLRAYARRGWWLRAHRLRRAWSTVSA
>gi|319761034|ref|YP_004124971.1| hypothetical protein Alide_0302 [Alicycliphilus denitrificans BC]
MTSATPSLRWKHRGELWLARWLRRWFRLRPLWLEGAPAPEFTLYSTGAARAPAAAIPRIIWSYWQGGTPP
LLVRRCFDNWRRLHPHFEIRILDERGALQYLPAIPRALDGASAAKRADWIRLELLRRHGGIWLDASTILT
RPLDWVLAEQARTGADFVGYYLQQYTSAPDRPVVENWFMAAPPASPFIEDLQREFTGEVIVRSGEEYIAH
LRAQGLYERALQRIDMPAYLSMHLALQVVLLRGGAYRLCLARAEAGPYLYHVLGRWRRTGLKLRLLFARV
CGPLPPLIKLRSPDRRRLDDYLARGLYLPESVAGRWLMGDEVAR
>gi|319761035|ref|YP_004124972.1| 2-nitropropane dioxygenase npd [Alicycliphilus denitrificans BC]
MTTTLLQRLNISLPIIQGPMTGSDTPQLAAAVSQAGGLGMLGCGMRSPEAMAQAAAAVRAATGKPFGMNL
FVLETPRPDAAEVAAAMDRLAPLYARFGLPPEAPARWCEDFAAQFDALIAARPAVASFTFGILSAAQVRR
IQSEAGSFVIGTATTPAEALAWQEVGADAVVASGMEAGGHRGTFQGDWEGSLIGTLPLVPTCVDTLKIPV
IAAGGIMDGRGIAAAQALGAQAVQMGTAFLACPESSIVPAQRAAMAAAQATDTRLTRIFSGRPARGILNQ
AMRSLQPQEADIPAYPVQNALMGPIRRAAAQAGDAGHIALWAGQGVGAARALPAGELVALLAQEWRAALQ
RLQA
>gi|319761036|ref|YP_004124973.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MDLVALDIFRTVAAEGSVTRAAERLGRAQSNATTRVQQLEEDLGVPLFLREGRRMRLTPEGETLLAYADR
LLALAEEARQALHPGAPTGRLRIGAMESTAAARLPGPLARLHAQWPALSLELRTAPSRQLADQVLAHQLD
CALVAWPPPGLEADAPIERTPVFAESLLLALPASHPPAATPADLRVHLLAAFAQGCTYRRIGEDWMRQGG
APVEVLELASYPAILACVAAGRCAGVVPQSVLQLLRTPPPLRWVPLGTCDTMLLHRPGYATPALAALQSA
LLSHQDAP
>gi|319761037|ref|YP_004124974.1| hypothetical protein Alide_0305 [Alicycliphilus denitrificans BC]
MRATPSWSEQPRAVTWAGMLALAVAMGVGRFAFTPLLPMMLHDGVLTLAEGSWLATANYVGYLAGALACM
ALPWVAPAVYERWHPARLARAGLVATVLLTVAMALPLPGAWPLLRFAAGVASAFVLLNVAAWCMVRLTAL
GRPSMGGLVFCGPGVGIALTGLAASAMVAAQWRASTGWVVCGLLSVLLCAVVWPVVRGRAAQARAGAPHP
HAPARAPGGGTVLARGVHALAYGLAGLGYIVTATFLPVIARAALPAGSLWPDLFWPMFGVGVTVGAALST
RANAAWDRRWLLCATYGMQALGIALGLWWPTPAGFALSSCLVGLPFTAITFYGLQEARRLWPQSADSFAS
LITAVYGLGQIMGPPMVAWLLARGGQAQGFAQGLALAAGALVVGAAMYAASAWRWPLVR
>gi|319761038|ref|YP_004124975.1| mosc domain containing protein [Alicycliphilus denitrificans BC]
MNATPPQPLGRLRAVLTGRALPYTRPGSRSAIAKQARGGPVGAGPLGLDGDEQGDPRVHGGPDKAVHCYA
WAQYAPWRQELAGNAAAQALLEQPGAFGENFSLDDLQESQVCIADQWQIGSARFEVSQGRQPCWKLNDRF
GVPDMALRVQSSLRTGWYLRVLQGGQVQAGDQVWLLARPYPEWPITRLLRAIAERDCTPATLRQILALPL
PPSWHKLFSCRLENASAEDWTSRLVGRQP
>gi|319761039|ref|YP_004124976.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen [Alicycliphilus denitrificans BC]
MNGTYHPPAPPLQVAQWFNTPQPLTLKALRGRVVVLHAFQMLCPGCVEHGIPQARRVHEAFPQDRLVVIG
LHTVFEHHDVQGGAAALQAFMHEYRLRFPIGLDQPDPQRTIPRTMHSLALQGTPSLVVLDPQGRVRLHHF
GHLDDLRLGTLLGQLLAEPVPAAATPAQAAAGCDDNGCPRPDMPPP
>gi|319761040|ref|YP_004124977.1| activator of hsp90 atpase 1 family protein [Alicycliphilus denitrificans BC]
MSTADIGTLQRTATGFEGRLTRRLDHGADAVWRMLTDPQAMAQWLAPGNIELCTGGAVRIDFVDSGIVID
SRVTAFEAQRVLAYSWSSGNEPERPMRWELAPAGEGTALTLTLQIPAGEDAAKACAGFEGHLDMLAAALE
GVPIKFPFERFLQARSAYNAQLAG
>gi|319761041|ref|YP_004124978.1| maoc domain protein dehydratase [Alicycliphilus denitrificans BC]
MIKHQMCPQRYFEDFELGEQFLLPSRTMTDALFAAFQLASGDNHPVHYDVEYCRAHGMPHMLAHGYQVVI
QTAAGAGLFPHMVEESLKGFLEQGSRFLNPVFVGDTLYCTLTVSELRPGNTTGVITLGTEVKNQKGEVVM
DGFQKYLLRKRRP
>gi|319761042|ref|YP_004124979.1| hypothetical protein Alide_0310 [Alicycliphilus denitrificans BC]
MMTRRSIHTAIVGALALVSAAAHAQSYPARPVKLIVPYAAGGPTDTFARALADAWGKKLGQVLVVENRTG
AGTLVGTDAVAKAQPDGYTILLTTVAHAVNPSIHDKMPYRTVEDFAPVGMAAKAPLVIVVNKNFPAQNLQ
EFIGYIKDHPGKVNYGSAGVGSAPHLGVELLNYMTGSKTEHVPYRGSAPAMQDVIGGHLAFMMDSAPTGL
AQVKAGTVRLIATTMGQRLPQTPDTPAVAEVVPKYEAYTWNAVFAPAQTPAPVIAKLNTSLKEALQDPGL
QKQAYDMGLVLEKNPQPQALAAFLGGELAKWGQVAKAAKMTAN
>gi|319761043|ref|YP_004124980.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MRYELTDLKVFLAIAAARSLSGGAADMHLTAPSASYRLKNLEQALGTALFERTSKGMQLTPAGLTVRRYA
EAILGNVERLGAEMQRHTDGVVGHIRVFANSSTLNGLAPALSRFLAAYPNVNVELEEHLSATVVKAVQDD
AADIGLAAGDIDFGGLTAIPYARDELVFVTPPGHPLAEFPIVPLDMALAHDLVGIGKKSSNFVFLEAMAN
KLGVAPRVRVHAPSFADVLACVKEGVGISLVPYSIAAAFIQSGQVQKVRVDEPWAQRQQCIVLKSPQSLL
PHEQAFVSYVVKTNASALADAAAPAIRGS
>gi|319761044|ref|YP_004124981.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MTTPAASTPPTRPLQGITVLALEHAVAAPFASRQLADLGARVIKIERPGDGDFARGYDSTVMGQSSFFVW
CNRGKESLALDLKQPGSMPVLDRLLERCDVFIQNLAPGAAARMGLDYDSLREKYPRLIVCVISGYGEGGP
YSDKKAYDLLVQAASGLISVTGTPDAPARTGISIADISAGMYAYSGILSALLQRGHTGQGMRVEVSMLEA
LTEWMSYPLNFSHYGGSAPVRSGLTHPTIAPYGQYRAGDGKSVIFGLQNDREWADFCRAVLQRPGMVDDP
RFASNLLRVSNRAELDAILEECFDSLTREQLLQRLDEGGIANAPLAEPDEVWTHPQFQARRRWREVATPQ
GAIQALLPPATLSGTEAAMGSVPALGEHTDAILKELGF
>gi|319761045|ref|YP_004124982.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MSLSLFSPFSRRLYLRIWLAVVGGVLVFAFAVGLAWRWAAEQNQHQLPTRGIVITDAQGRTLVDGTGIRQ
RLDPGEGIHYRIEADDGAVYEMRLSPRTPRMRPDEHGPAAWFRPPLGFLWMLALVGIAVTVGVFPIIRRL
LQRLEQLQRSVQRFGEGDLSVRVAEQGHDEVADLARQFNAAAARIETLVQSHKSLLANASHELRSPLTRI
RMGLELMRGGAPSPASRAEIERNIAELDQLVDEILLASRLDAGAADVGTVEPVDLVGLAVEEGVRVDAEL
QVGDGAPVEVPAVSKLLRRAVRNLLENARRYSQGAITLAVTREGPSAVLRVCDHGPGVPPAQRERIFEPF
YRLPGASERSGGVGLGLALVRSIAQRHGGSVHCEDRPDGAAGACFVLSLPATR
>gi|319761046|ref|YP_004124983.1| response regulator receiver [Alicycliphilus denitrificans BC]
MNSQLLMIEDDHRLAQMVGEYLGQSGLQVTHMADGTSGLAQLQGSELPDLVILDLMLPDMDGLEVCRRIR
ALPGAAAQVPVLMLTAKGDPMDRVIGLEIGADDYLPKPFEPRELLARIRAILRRREAGAQPPANHLLRFG
SLEIDRDARTITVGGEPAELTSYQFDLLVTMAERAGRVLTRDQIMEAVRGRELEAFDRSIDVHMGRIRAA
IEADPKNPRRILTVRGVGYVFAKQQD
>gi|319761047|ref|YP_004124984.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MVAVRIIPRMPDSSSAAPARRSWRQAWLVYLEPASLRMLALGFSAGLPLLLVLGTLSFRLREAGIDRTTI
GYLSWVGLAYAFKWVWSPLVDRLPLPLLTRALGRRRSWLLLAQGMVMAGLVGMALVDPRATLGPMVWCAL
LVAFGSATQDIALDAFRIESADADRQAALAATYQTGYRLAMIWAGAGVLWVAARAEVAGLAGYQAGAWAA
AYLVMAASMLVGTATVLLSPEPTPRPLAPARNLGEWLRGAVVEPFADFIRRYRWQAALILALIAVYRISD
VVMGIMANPFYVDMGYTKDEVAAVTKVFGVVMTLAGAFVGGVLSMRLGVMRVLMLGAVLSALSNLLFAWL
GQRGHDLTGLVLVVSADNLAGGIASAAFIAYLSGLTNVQYSATQYALFSSMMLLLPKWLAGFSGRFVDAH
GYAAFFTGTALLGLPVLLLVALAARAKTASSV
>gi|319761048|ref|YP_004124985.1| cupin 2 conserved barrel domain protein [Alicycliphilus denitrificans BC]
MPSLVHPVASVRRYAGEHQAHAHEHAQVLYALEGRMELEVAGRAAFVDTACGLVVPAGVEHGFLARPGTR
MFVIDAPPQAGVDRVRRFAVPPGARPADAAGQLALLLHAPRVLARRGMDLALLQSRVDAALHEPWPTARM
AALFHLSAPRFHARLVELTGRTPQAWLRARRLDAAERALARGLPLEATALRVGYASASALAYALRRERGT
GARALRGFQAK
>gi|319761049|ref|YP_004124986.1| hypothetical protein Alide_0317 [Alicycliphilus denitrificans BC]
MNTASLRSIAMVLLAAMLWGTTGTAQSLAPATLSPYWVGALRLGFASAFFAVLAWPALRRGAWRGLRGAA
LPLAALCVAAYNLSFFAGVKASGVALGTALAIGSGPVWAGLLQTVAQRRWPAPAWWLGTLLGVAGGVAMA
LDGGADARAPLSGIALCLLAGLSYAGYALLNKRLVARAGPAMVNLAVFGGAGLLSLPVALLLGGVPTPSA
ATWGVVLYLGLAATGLAYLLFSAALRHISGATGVTLALAEPVTAFALAILVVGERPSAMAFWGLGGVLAG
LLLVIWSELRAAPKLGA
>gi|319761050|ref|YP_004124987.1| peptidase m48 ste24p [Alicycliphilus denitrificans BC]
MMIETSSDAPGCRCCAGGIWNARRVFVLAAAGAAALPAVAQVDVGSASGLRKLVPAEQLETSATQQYGQM
LAQAKAKGALAPDGHPQLVKLRAIARRLIPHAAQWNSRAASWRWEVNLIGSKQINAFCMPGGKIAFYTGI
LDQLKLSDDEIAMVMGHEMAHALREHARSRIAKSQATSLGLSLGAQLLGLGELGNAAASLGTQLLTLKFS
RGDETEADLVGLELAARAGYNPQAAVSLWRKMGEATGSEGIGFLSTHPSGPDRIRELEQNVPRVEGLYRA
ARGG
>gi|319761051|ref|YP_004124988.1| regulatory protein gntr hth [Alicycliphilus denitrificans BC]
MAKRSALYAIAAPAPSSARTLIEHAYARLRDDIVSGQLVPGEKLRVEHLKERYGVSAGTLREAITRLASD
ALVVTEGQRGFRVAPITTEDLEDITNLRVQIETEALRQSIRAGDAQWRQRVEQAFAAISAEEPIAPGRRH
AWEQLNTRFHEALLSGHASPWTVHVLRLLSRHTERYRSFAMALPGCVRDVHAEHTAIFEYTMAGQDARAA
LALEAHIRTTPDLLIQALREGRASLPGSAAPLLEGKGLQDS
>gi|319761052|ref|YP_004124989.1| sigma-54 factor interaction domain-containing protein [Alicycliphilus denitrificans BC]
MPTLPALPSDADLRRQIQFSAADGRIWLAGQRMVLMHAASLGILRRELIHTLGPAATRRLLLRVGYASGE
RDAALARQLRPGADAFAMFSVGPQLHMLQGAVQVTPEKLELDAATGHFHGIFAWQQSWEVEVHVRDFGPQ
NVPVCWMLLGYASGYTSAFMGRTVLYKEVQCAASGHAHCRIEGRPVQDWPDGAQLAADYAPDALLDDGAP
QNGPRALPAWPAPMPAEDRPEPPADALGPLIGRSAGFTAATRLLRKAAGTQVTVLLTGETGVGKERFARA
LHALSPRAAKPFVAVNCAALPGNLVESELFGTEKGAYTGADAARAGRFERAHGGTLFLDELGELPLSAQA
KLLRVLQDGQVERLGATQPRQVDVRLVAATHVDLQDAVRAGRFRQDLYYRLNVYPIRIPPLRERQDDIEP
FARHLLQRFAALHDKHIGGLTDRALHALRQYAWPGNVREMENLIERGVILADPGQPVDAAHLFPDSAPAA
APAHTLQASGRLGEARAPACDAALIDRLLGERLDLQALETHLIEAAVERSHGNLAAAARLLGLTRPQLSY
RLNKVRDI
>gi|319761053|ref|YP_004124990.1| phenol hydroxylase subunit [Alicycliphilus denitrificans BC]
MSCIGLGMRTTPPSSNDRWDLQRRYIRIVQEHGNGMVEFEFAVGEPQLYVEMVMPRAQFDDFCATQGVQP
TVGRLPGQEQGSAEHEWDWNLRDARERHFRHEP
>gi|319761054|ref|YP_004124991.1| phenol 2-monooxygenase [Alicycliphilus denitrificans BC]
MQIDLRTVSITPLRQTYDHIARRLGADKPASRYIEATMDVQPQANFHYRPTWDPEHELFDASRTRIVMQD
WYALKDPRQLYYGTYAQARARLQEVAEADFEFVESRGLAERFDDTARRTALDFYVPLRHVAWGANMNGAY
QCAYGHGTAITQPCLYAGMDQLGIAQYLTRLGLLLGNQGDLEAGKQAWLEAPAWQGLRRVVEDTWVLKDW
FELYVAQNVVLDGILFGLAYREVDAALSEQAGPTVSMLTRFQAEWFQDANKWVDAVIKTAAAESADNQAL
LGQWYAHWRGRVQEALAPVARLALGDAGDAALARAVAAVDARMHKSGLAV
>gi|319761055|ref|YP_004124992.1| monooxygenase component mmob/dmpm [Alicycliphilus denitrificans BC]
MSNVFIAFQKNEETRAIVDAIVADNPQAIVNQQPAMVKIDAPGRLVIRKSSIEQEIGREFDLQEMHVHLI
TLSGNIDETDDELSLTWNQ
>gi|319761056|ref|YP_004124993.1| methane/phenol/toluene hydroxylase [Alicycliphilus denitrificans BC]
MDRQVSKKLGLKERYNLMTRDLAWTPTYQALKDVFPYMEYEGIKIHDWDKFEDPFRMTMDSYWKYQAEKE
RKLYAIIDAFTQNNGHLGVTDARYINALKLFLTGVSPLEYMAHRGFAHVGRQYPGAGPRVACLMQSLDEI
RHSQTQIHSLSNYNKHYNGFANWRHQHDRVWYLSVPKSFFDDAVSAGPFEFIVAIGFAFEYVLTNLLFVP
FISGAAYNGDMGAMAFGFSAQSDESRHMTLGLEIIKFILEQDPDNLPIVQAWLDKWFWRGYRVLTLVAMM
MDYMLPKRVMSWKEAWETYAEQNGGALFADLARYGIKVPAGWEQACKDKDHLSHQAWNVFYNYGAAAPFH
TWAPSEADMKWLSEKYPDTFDKYYRPVWEHYAKEQAEGRRFYNKTLPMLCQTCQIPMFFTEPGDPTKIAY
RESDWRGQKYHFCSDGCKHIFDNEPEKYVQSWLPVHQIYQGNCFPEDADPSKPDFDPLMEVLRWYRMEFG
RDNLDYADSEDKKNFEAWRAQSTSN
>gi|319761057|ref|YP_004124994.1| phenol hydroxylase conserved region protein [Alicycliphilus denitrificans BC]
MAVTSAAPYDFPQQDTADKFPAPLLYIGWEDHKMFCAPFCVPMPPATRFGDMVQGALPGLYGAHPDFARI
DWNRAEWFVSGKPFTPDMDKTVAENGLGHKSVIRFRTPGLTGLQGSCF
>gi|319761058|ref|YP_004124995.1| oxidoreductase fad-binding domain protein [Alicycliphilus denitrificans BC]
MSHQLTIEPLGQVIEVEEGQTILDAALRAGIYLPHACCHGLCGTCKVQVTDGEVEHGEASGFALMDYERD
EGLCLACCATLESDSAVIEAEIDDEPDALNLPVQDFAGVVSRIEDLTPTIKGVWIELDAPMTFQAGQYIN
LQIPGESQPRAFSIASSPAQASEIELNIRLVPGGKGTGWVHQQLRPGERVRLSGPYGRFFVRASAHDKQG
LGYLFLAGGSGLSSPRSMVLDLLAAGGDKPITLVNGARAQDELYHHAEFLQLAAEHPRFTYVAALSGEPE
GSGWQGARGYVHEAAKAHFGNDFRGHKAYLCGPPLMIDACISTLMQGRLFERDIYTEKFISAADAQQVRS
PLFKKI
>gi|319761059|ref|YP_004124996.1| ferredoxin [Alicycliphilus denitrificans BC]
MASYTITIAETGESYRCLDERSVLEGMEALGRKGIPVGCRQGGCGVCKVQVLEGRYAKRVMSRAHVSAEE
EASGCVLSCRIKPSSDLRVSVVGAMKKNVCRPQEQAAPTLSTP
>gi|319761060|ref|YP_004124997.1| catechol 2,3 dioxygenase [Alicycliphilus denitrificans BC]
MAMTGVLRPGHAQLRVLDLEESVQWYTDVMGLVPMGRDQQGRAYFKTRAERDHNSVVLRQADQAGIDFFA
FKVLDKATLEDFDRKLQAYGVKTERIPAGELLETGERVRFKIPTGHTIELYAEKTDVGNGIGYQDPDVDV
LDGPGIRPIRMDHCLLYGGDIDGNVKLFTEVLGFTLVERVKLEDGKTDLAVWLTCSAKAHDIAMVRHGED
GKLHHVSFQMPSWESVLRAADIMSVNRVSIDIGPTRHGITQGTTIYFFDPSGNRLETFCGGYDHYPDMHP
ITWSWEHVGRGIFYHDRKLNDAFLSVVT
>gi|319761061|ref|YP_004124998.1| hypothetical protein Alide_0331 [Alicycliphilus denitrificans BC]
MQRSVEQRAITAEAAHAAVAAACAKAGELGIRVNAAVTDASGVLAAFLRMPGAFLHSVDIAIDKAYTAAG
FGFATAQWVGILRGDEALRLGMPQRPRNVVFGGGLPMREGGVLIGGIGVSGGSAEQDEICARAALAALGL
EET
>gi|319761062|ref|YP_004124999.1| hypothetical protein Alide_0334 [Alicycliphilus denitrificans BC]
MKTTSIAAAAAAAAAAALALLAATGAHADGHYVPGVEGIQAASVPPPGMYYLGYLVNYNIDDFRAPGSST
NLPGHNSGTVTALANRFVWITGHKLLGADYGVEAIVPLVRTSLTINAAGISDSRSGVGDIYLGPLVLGWH
GPQWDAVAAAGMWFDTASTSHPASAGKGFKSTMLTGGLTYYFDGAKTLSGSALMRYEFNGRNSAGVRPGD
QLTLEWGLGKSFGAVSAGLVGYSQWQTTNDDGAGASTNKAARHAVGAELVYPVPGAGVFLKGAVYKEFSA
TAGTGPQPKGSLVRFTLVKAF
>gi|319761063|ref|YP_004125000.1| 2-hydroxymuconic semialdehyde dehydrogenase [Alicycliphilus denitrificans BC]
MKEFLNFINGEYVRGTSGKTFDDINPVDGSLIGRIHEAGQGEVNAAVAAAQAALKGDWGRLAVVERCKLL
DAVAGEINRRFDDFLQAEIADTGKPHHLASHVDIPRGAANFQIFIDTIKSTATESFNMRTPDGKTALSYG
VRVPRGVIAVVCPWNLPLLLMTWKVGPALACGNTVVVKPSEETPATATLLGEVMNAVGMPKGVYNVVHGF
GPGSAGEFLTRHPGVNGITFTGETRTGSAIMKAAADGVRPVSLEMGGKNAAVVFADCDFQVAVDTLTRSC
FENAGQVCLGTERVYVERPIFEKLVAALKERAEAMKPGLPFDKDTKIGPLISKKHQAKVLGLYQKAKDEG
ATIVTGGGIPDMPEALRGGSWVQPTIWTGLPETATVVTEEIFGPCCHISPFDTEEEVLGKVNANRYGLAT
AVFTQDIARANRLAHQIEVGLCWINAWFLRDLRTPFGGSKQSGIGREGGVHSLEFYTELRNVMVKF
>gi|319761064|ref|YP_004125001.1| alpha/beta hydrolase fold protein [Alicycliphilus denitrificans BC]
MTDTARNPELAHTIAAAGLRTNYHDVGQGDPVLLIHGSGPGVSAWANWRLVMPALAERARVIAPDMAGFG
YSERPAGFAYGLDAWVRQAVGLLDALGIARADLVGNSFGGGLALALAIRHPERVRRLVLMGSVGVPFAIT
PGLDAVWGYEPSFEAMRALLDIFAFDRALVNDELARLRYEASIRPGFHESFAAMFPAPRQRWVDALASRE
SDIRRLPHETLVIHGREDRVIPLANAYTLADWLPRAQLHVYGRCGHWTQIEHAARFARLVGGFLAEAAAD
EPLPLAA
>gi|319761065|ref|YP_004125002.1| 2-oxopent-4-enoate hydratase [Alicycliphilus denitrificans BC]
MNTPLHEQLGEELYQALRQRQVLEPLSNRHPGLTIEDAYAIQQRMLARRLAAGEKVVGKKIGVTSKAVMD
MLGVYQPDFGWLTDAMVYNEGEAIPADTLIQPKAEGEIAFVLKKTLQGPGVTAADVLAATEGVMACFEIV
DSRIRDWKIKIQDTVADNASCGVFVLGDRLVDPRDVDLGTCGMVLEKNGEIVATGAGAAALGHPANAVAW
LANTLGRLGIALEAGEVVLSGSLGIMVPVQAGDNLRVTIGGIGGCSVRFV
>gi|319761066|ref|YP_004125003.1| acetaldehyde dehydrogenase (acetylating) [Alicycliphilus denitrificans BC]
MNQKIKCALIGPGNIGTDLLAKLQRSPVLEPVWMVGIDPESDGLKRAREMGIKTTHEGVDGLVPHMKQDG
VQIVFDATSAYVHAENSRKVNAQGALMIDLTPAAIGPYCVPPVNLKEHLGRGETNVNMVTCGGQATIPMV
VAVSRVQPVAYGEIVATVSSRSAGPGTRKNIDEFTRTTAGAIEKVGGAKKGKAIIVINPADPPLIMRDTV
HCLTEEEPDREAITQSIHAMLAEVQKYVPGYKLVNGPVFDGKRVSVFLEVEGLGDYLPKYAGNLDIMTAA
AARTAEMFAEEMLAGRLAFQPVAA
>gi|319761067|ref|YP_004125004.1| 4-hydroxy-2-oxovalerate aldolase [Alicycliphilus denitrificans BC]
MTFNGKKITLHDMTLRDGMHPKRHLMTLEQMKSVAQGLDAAGVPLIEVTHGDGLGGASVNYGFPAHSDEE
YLGTVIPLMKQAKVSALLLPGIGTVDHLKMAHGLGVHTIRVATHCTEADVSEQHITAARKLDMDTVGFLM
MAHMNSASGLVKQARLMEGYGANCIYVTDSAGYLLPEQVKERIAAVRAALKPETELGFHGHHNLAMGVAN
SIAAIEAGANRIDAAAAGLGAGAGNTPMEVLVAVLDRMGLQTGVDVWKIQDVAEDLVVPLMDFPIRIDRD
ALTLGYAGVYGSFLLFAKRAEKKYGIPARDLLVELGRRGMVGGQEDMIEDTALTMARERGIKVAA
>gi|319761068|ref|YP_004125005.1| 4-oxalocrotonate decarboxylase [Alicycliphilus denitrificans BC]
MALNQATIAQLAEHLENCQLQVRDTPKITDEHPGMDWDDAYAIQDAILQRKLARGARVVGLKAGLTSHAK
MKQMGVESPVFGFLVDDYCVPEGGTVQTRELIHPKVEPEIVFVLKHALKGPGCHIGAVLAATDFVLPGIE
VIDSRYRDFKFDLKSVVADNTSAARFVVGGQAQRPERVDLRTCGIVLEKNGQPVALGAGAAVLGHPAAAI
AMLANHLGRRGQELPAGSMILSGGVTEAVSVQAGDNVSLRVQGMGSVSLRFA
>gi|319761069|ref|YP_004125006.1| twin-arginine translocation pathway signal [Alicycliphilus denitrificans BC]
MQRRDFMAAAALAGLAPAWAQAGYPAKPVRMIVPFPPGGPTDVMGRTAAKAMGDRLGQQFVVENKAGAGG
NIGTDAVAKAAPDGYTIGLTAISSLAIAPHLYSSVPFNVEKDFVPISLVGTTPCALVIHPAAPFSDLKGM
VAYAKANPGKLSYATSGIGTSNHLAAELLQSVAGIQLTGVPYKGSSQIVPDLLSGTVMMSMESSLATTLQ
HVRAGKLKAIAVTSPQRAKALPDVPTVAESGYPGFEVETWFGLVAPARTPQAVVDKLHDAWAAGSAAPEA
RAAFDNISGNLRVTTPQQFAEFIRAENRRWGDLIRKLGIKAD
>gi|319761070|ref|YP_004125007.1| 4-oxalocrotonate tautomerase family enzyme [Alicycliphilus denitrificans BC]
MPFAQIYMIEGRTEEQKKAVIEKVTQALVDAVGAPPANVRVWIHDVPKENWGIAGVSAKELGR
>gi|319761071|ref|YP_004125008.1| beta-lactamase domain-containing protein [Alicycliphilus denitrificans BC]
MLHYHTIPVTAFQQNCSLVWCDQTMDAAVIDPGGDLDVLLAEAKRRGLHLKAIWLTHAHIDHAGGTGELA
QRLALPIIGPHEGDQYWIDGLPQQGQMFGFPPALHFTPTRWLHDGDTVTIGRETLHVRHCPGHTPGHVVF
HAPQVDRCFVGDVLFAGSIGRTDFPGGNHQQLIDSITQRLWPMGDQTVFIPGHGPESTFGRERRSNPYVG
NT
>gi|319761072|ref|YP_004125009.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MSNPPAPSKPADGGVIAVTRALQLLEAFAVGESHLSLAELSRRAGLHKTTVLRLARTLAQSGYMVQREDG
DWRLGPAAGWLGARYQAGFDVQNVLEPALRELTQTSGESAAFYVREGNVRTCLVRVEGPQALRHHARMGE
GLPLDKGSPGRVILAFSGEPGEVYEEIRRRGYHWSIGEREQGVATVSAPVFGRNWRLLGCVCISGPQSRL
PQEKLEALAQTIIKTANQLSYALAGKAASTAAQVPGVWHP
>gi|319761073|ref|YP_004125010.1| hypothetical protein Alide_0345 [Alicycliphilus denitrificans BC]
MLARTLSRSLCAAALGLAAATGALAQAAYPAKPIRLIVPFPPGGGTDMIARTVAQKVADQNKWSVIVDNR
PGAGGNLGVDAAAKAAPDGYTLVMGQTSNLAINPTLYPRLPYDPLKDLVPVALVSSSPIVMAAPANTPFK
TFADVVAAAKKQPDGITLGYSGNGTVAHLAGELAENAAGIKLRHIPYKGAAQAMTDLVSGQIDLYMSSVP
TLLGQVRNGKLRPIVVTSLKRSAQLPDTPSLAESGYRGFDAVTWFGVLAPAGTPASIVQQLNKAINEALK
QPEVAEKLRSEGGDVLGGTPEQFDQLLRAEVPRWGKIVKDSGASLD
>gi|319761074|ref|YP_004125011.1| amidohydrolase 2 [Alicycliphilus denitrificans BC]
MREPVAFSAGTGTPGVALPAGACDCHVHVYDRRYPAAPGAKLLPPDASAHDYRALQRRLGTTRAVLVTPS
TYGTDNRCMLDGLAALGPQARGVAVIGGGEIDAELQRLHDAGVRGVRLNLSLGVSGTADMLEPLARRIAP
LGWHLQLLMAPELLAAQAGVLRRLPVPLVFDHFGRIAPGAQGQAAHALLLELLQAGRAWIKLSGGYIVSA
LHTVEDPALDPLAASYLRCAPERVLWGSDWPHATASAGLQPMPDDARQIDRLHDWTRLAFVPLRRVLVDN
PQALYGFPPL
>gi|319761075|ref|YP_004125012.1| hypothetical protein Alide_0347 [Alicycliphilus denitrificans BC]
MSAHDFSATRRRLLATLGVALAAGPALAQEWPGGKTITYVVPYPPGGSTDVLGRNIAQRLGPALGTTVIV
DNKPGATGTIGAAFVARAQPDGYTLLGTTIGPQAIAPHLMGKLPYDPIAGFEPVITLGTIPHILVVGAGQ
PFQGVADLVAAGKAQPGKLAYASGGNGTILQMQAELLQQQTGARFIHVPYKGDTPALQDTLGGQVQFMFA
PAAAALPHVQAGKLRALAVTSAQRLPALPQVPTMGEAGLKDFVVEQWHAVFVPARTPAAIVQRLNAEIAK
ALKDPAVTALADKLGITLVGGTPGQLAALQKADSTKWAKVIRDGNIKAD
>gi|319761076|ref|YP_004125013.1| dimethylmenaquinone methyltransferase [Alicycliphilus denitrificans BC]
MSQLPEVIRSFERVSAEVVQQAGTFQAAILADVAGRRGTLHARVAPVHERMKLAGPAFTVEVRPGDNLMI
HAAIALAQPGDILVIDGKGDQTAALMGTLMLSACKKRGLGGVIVDGAIRDKLELLELGFPVFSAGFNPAG
PTKFVPGRINHPISCAGASVFPGDLVVGDADGVVVIERAKAPAMMALAVKKVADEAARIEAIARGDTASK
WLPAALRAAGVLKEGEEL
>gi|319761077|ref|YP_004125014.1| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MSRPAILITAADLAPQALALLADYEIVYAGRSPTEDDIVALCRRHDPVAIIVRYSKVGAAAMDAAPSLKV
ISKHGSGTDTIDKAAAKVRGIEVVAAVGANAAAVAEQALALLLACAKSVPQLNERMHAGHWDKATHKSLE
LSGRTIGLIGLGAIGLRFAKMVDALGMHVLGFDPFAKNLPDYVQPADLETIWRESDAISLHCPLTDDNRH
LLGAGTLARCKQGVIVVNTARGGLIDEAALLAAVQSGQVRMAGLDSFAVEPMTAGHPFQHQPGFILSPHI
GGVTSDAYVNMGLGAARNALAVLAR
>gi|319761078|ref|YP_004125015.1| hypothetical protein Alide_0350 [Alicycliphilus denitrificans BC]
MQFNKNRRLALIHQALAAIALVATGLPVQAQNWPERPIKLVVPYPAGGNADNTARLLATQLSARLGQQVV
VDNRPGGSGTIGAAAVAKAAPDGYTLLLDATAFTVNPSLFAKLPFDAAKDFAPISLVMQAPLLLVVPAVS
PLKTVADLVQAAKARPGQLTYASAGNGGAQHLAGELFKQGAKVSMTHIPYRGGAPALTDLIGGQVDLMFS
ATTASGPFVKSGKLRALAISSVQRTPGWEQVPTVAEAGLPGFQVNEWNGLFAPAGTPQPVLQRLEAETRA
IVASPEMKKRFAELGVQGVGSSAQEFKSFVQTETAKWAGVIRTSGIRMD
>gi|319761079|ref|YP_004125016.1| hypothetical protein Alide_0351 [Alicycliphilus denitrificans BC]
MKSLKKYLLAACACIALAAHAAFPERPITIVVPYAPGGAADAVARVIASRLGTRLGGSVIVDNKAGASGT
IGAGYVAKAQADGYTMLYDATPYSINPHLFPKMPYAANALQPLSLVLLAPNVLIVPASAPFKSVGDLIAK
AKAEPGKLNFASGGSGTVQRLAAELFRQKLGLDMVHVPYKSGGPAITDVMAGQVDFMFGTVAATAPHIAA
GKLRALAVSSPERSRRLPDVPTVAEAAIPGYEAYEWNGMFLPAGTPAPIAAQLHKALAEVLQEDEVRQRL
ADMGAQPIGSTPAEFAAFLKKEDAKWGEVVRKGHIKLD
>gi|319761080|ref|YP_004125017.1| amidohydrolase 2 [Alicycliphilus denitrificans BC]
MAQPLLSAPVPHSVGLNRPARTLPPLACDSHMHIFDPRFAPSPHWRRQPPDAPVAAYRQLQQRLGTRRAV
VVTPSTYGTGNACTLDALDQLGDDARGVAVVAQDVQDAELDRLHARRVRGLRVNFVSPQSWGETTPQMLA
TLARKAARLPGWHIQVFMHPEQIVALESVLAALPVPLVVDHLGRIDPAQGQRAEAHGALRRLLDGGNAWV
KLSGAYMRSTAPAYADTLPLAQALVRAAPERLVWGSDWPHTTEAPGTVNDAGLVDLLRAWAGSDAAMDRI
LVDNPARLYGF
>gi|319761081|ref|YP_004125018.1| smp-30/gluconolaconase/lre-like region-containing protein [Alicycliphilus denitrificans BC]
MFLLQAPEVRELELFTSMPEPLRRRQRSAWADANRGGAVTDSFLEGPVFDDAGNLYVTDIPWGRILRIDA
QGAWTLVAEYDGEPNGMKFLDAGTLLITDYKNGLMRLDVASGKVTPYLERRNSERFKGVNDLVFDSAGNL
YFTDQGQSGLHDPSGRLYRLRPSGQLDLLLANVPSPNGVALSPDERVLYLAATRGNCVWRVPLLPDGSVA
KVGQFFTSYGPSGPDGLAVDAEGRVLVANPGLGYVWVLNGRAEPVLVLRGAPGSSTTNLAFGGEGRRQLY
VTDSTHGRILRAALDAPGLALHRPR
>gi|319761082|ref|YP_004125019.1| extra-cytoplasmic solute receptor [Alicycliphilus denitrificans BC]
MHPIITRRGALRYALAAACAPGLAFAQEAPFPSTNVHLVVPYAAGGATDIVARAVADKLGPRWGKPVVID
NKPGAGTTLAAAQVARAPGDGHLLYMTTSAHTISAALYKKLDYDPLASFAALTLVAKVPLVLVVRPSLDV
STLDEFTRYVRANPDKAAYASPGNGTAQHLTGEMFNAAMKTRMVHVPYKGDAPAITDLLGGSVDAMFATL
TVVLPHIASGKLKAIALANGSRIEKVPAIPTFAEAGLPNFEAATWFGVLAPASLPKGLRERISRDIRAVV
DQPDLRARLIDLGGEVVSNTPAAFEAFMQAESAKWQGIARQSGAVIN
>gi|319761083|ref|YP_004125020.1| 3-hydroxyisobutyrate dehydrogenase [Alicycliphilus denitrificans BC]
MSNTTSQVIGFIGLGVMGEPICRNLAVKTGARVIAHDLDAAPLQRLAAHGVQAAPSAAAVMQAADVVFLS
LPSGEVVAQLCRQDGGLLASARAGQTIVDLSTSPVDTTRALAGEFAALGARFVDAPVARTRAAAEAGTLA
VMVGAAPEVFEAVKPLIATFASDIALCGPVGCGQVLKILNNMVLFETVVAVSEAKAIGEKAGVDPNVLFD
TLSKGSADSFALRNHGMKAVLPGEFPERAFSVLYARKDLKYALQLARDAGVDARGAAVVDAWFQQAIDSG
LGEKYHPVISRLIAGQR
>gi|319761084|ref|YP_004125021.1| aldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MLEHKPMLIAGKDAPGEDGIAPLVSVNPATGATNHEVAAAGPRAVDEAVRSAAQACKAGAWTQMLPMQRA
RILFGIADRMERDGDHLARLQMLENGKVWSECVKQVKSAAATFRYYGAVCETTGSEVTPARGNYLSMTAY
EPYGVVAAITPWNSPLTMEAQKIAPALAAGNAVVLKPSEVTPSTGLAVGRIALEAGLPPGLLNVLPGTGH
DVGAALVAHPLVRMVSFTGGTESGRRIAEVAARKLMPVALELGGKSPHIVFADADIDAAVAAVADGIFEG
SGQSCVAGSRLFVQRSVHDAVVRKLVERARSLRVDLPDAAGAEMGPLATFAHRDKVERMVEDARTAGAQI
LAGGARPGAAALARGAYYLPTVIGGIDNRAAIAQQEIFGPVLCVLPFDDEEDLVAQANDSAFGLASGVWT
ADYQRAWRVARALEAGTVWINTYKQLSISTPFGGFKESGIGREKGASGMRLYQQPKGIYFGMA
>gi|319761085|ref|YP_004125022.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MLAPTSTEPSDKSDGVAAVDRALHIATALANSPQALTLTELSNVTGMYKSTLLRLLASLERAGLVTHRAD
KRYALGPLAFVFGRSFEQVHGLQGAIQPILQWLVEQGTESPSFHVRHDQSHRLCLMRIDSNHSTLDRVRT
GDLLPLHKGAAGKVITTLEQGSQAQTAAAGDLVFTSFGERDPLCGAIAAPVFGPSASLLGAISVSGPLER
FSELAVQRMKTLVLAAAQRATHSLGGKWPSAS
>gi|319761086|ref|YP_004125023.1| hypothetical protein Alide_0358 [Alicycliphilus denitrificans BC]
MSSHTTHTSLAERFASLAPHVNANACLVHRGRALTADLVIVVGTARFLLRIHQGEVVEVTQRFALFHPCA
LFVQGTAKAWERLWEKVPPPGWHDLFALHKRGEMVIEGDTRLLFSHLQYLKDVLEMPRHVPADA
>gi|319761087|ref|YP_004125024.1| alpha/beta hydrolase fold protein [Alicycliphilus denitrificans BC]
MKDRIEPIVGRYIHVDVLGETCRIYFEECGQGIPLLCLHTAGSDGRQFRHLLNDAGVTDRFRVIAFDMPW
HGKSYPPVGFHERDYELTTERYVATIRAFSAALGLDRPVVMGCSIGGRIVLQLAHAHGAEFRALIGLESA
DHQQPWYDTSWLNRPDVHGGEVCAALVSGLIAPQSPSEYRHETLWQYKQSGPGIFKGDLYFYRVDSDLRG
KLGGIDTSTTPLYLLTGEYDFSCSPEDSIRTAETIPGAKVTVMKELGHFPMSENPAQFRKYILPVLDEIA
AR
>gi|319761088|ref|YP_004125025.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MKKILAASLLCVGCGAFAQEELKIGAIVTLSGAGAAWGQAMLYAAELAADDVNAKGGLDVGGRKYKVKVV
AYDDKYQAGEAVTAANRLVFEDKVKYVIGPVGSAAALAVGPIMEKNKVVMLTLGFTDKALAADKPFSFRP
NLTTMETSQPQIDWIVKAKNIKKVGALFPNDETGQQIAQDLEKAYAKAGAQMNAKEFFERERVDMMPLLT
RIMAKGVDAIELDGNAPGTAGLIVKQARELGFKGHIIRSGGPATAEIVNVAGTGATNGMLVNTPINPANA
EVKAYAERYFGKYKKRMNGFSPAFYDGTRMLFQAMGQAGTATDTDKVRVALEGIKDFKGILGTLNWTGKE
VYGSNHQISAPFYVARVQDGQEVVESTCSLSACK
>gi|319761089|ref|YP_004125026.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MDFTFLIGQALTNGLIIGLLYLLMAIGFTLVFGVMRVVNFAHGEFYMLGAFLAYVCVTRLQLPFLAAVLA
TFAVTLVAGWIIEVLVLKGFRGNELNGMISTIGLAMVLQNGALLVFGPDPQSMPPVAQGVVSLGPIVLPM
SRLYVVAFSIAVLVLLYLFLMRSKGGRALRAVVQDTEIASAQGIRSHLMYPLGFGIGVALAAVAGALMAP
VFSVSPSIGSTPLLKAFIVVILGGLGSIPGAALASLLLGVVESAANTFMSSSMSDMLLFGFVILMLIFRP
SGLLGKSGR
>gi|319761090|ref|YP_004125027.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MHASSSISTMKPRAPDSGAGAPQARWRLWLPGLLVLFALPLFTSSPFHMHLAVLICLNIIFVNGLSLLSR
TGQLSFCHAAFMGMGAYASVIATTQWHVPFLLSVALGVAVAAAVAFLLGAVILRLQGVYFVLVTFCFGEL
FRLFLLEGGSYTGGANGIANIPPASILGLAFDTKTSFYVLAAACAFASIALLIALFRTPQGTALDAVGDN
QELAEASGIGIQRTQMFAFVLGSAMAGFAGALLAHYLGFVSPESFNQHISVAAIVMLVIGGRASVLGPIL
GALIMTPLPELFRSAIETQNILYGITLILVLKFLPGGLVGIAAKLRGKGGKA
>gi|319761091|ref|YP_004125028.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MTALLKVDGLSRYFGGLAAVKDLSFELNAGEIVGLIGPNGAGKSTAFNVISGSLAPSAGRIQFAGQSIEG
MRPSQVVRHGLARTFQSATVYPAATVQENLYRGALARFDVPVWAQIAQTASYRSALRKVREEVDEVLEIT
GLAPYRDDVAGALAYGHQKRIGVAIGLATRPRLLLLDEPAAGLNPEECAEFGCLLKTLRDRHEISLLFVE
HHMALVMNTCEKIIVLVQGQKIAQGTPDEVRNNPAVIEAYLGVDEDAHG
>gi|319761092|ref|YP_004125029.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MPTVEVKDVVVHYGLVEALHGVSFTVPAGQIVALVGSNGAGKSTTLKALMGLKKVSAGSIHMDGRRIDAT
GPAQRVSMGLALSPEGRRLFPRMTVWENLMVGAHTVGSAAARNRSLEQVCALFPRVQERRSQLAGSLSGG
EQQMVAIGRALMSHPQILMLDEPSLGIAPKIVSEIAQAIVRLNRETGISVILVEQNARLALKMAHHAYVF
EQGTVIRSGSGQELLRDAFVQKAFLGV
>gi|319761093|ref|YP_004125030.1| amidohydrolase 2 [Alicycliphilus denitrificans BC]
MENLPIVPRAEVRPQWLARHHEAPLEPELPIIDPHHHLSDSLWGGYLQDDLLADLGAGHNIQSTVFIQVG
FGYREDGPGHLRPVGETERVAAIAGRIPAEAGTQVCEGIVGFADLALGARVEETLAAHLQAAAGRFRGIR
CHAAAHAQFQYGVMHAPPLHLYMDPKFREGYATLARFGLTFDSWAYHTQLDELCDLARAFPDIPVVIDHI
GVPLGVGPYVGQRDAVFAEWKRLLQKIAALPNVCIKLGGLGMSVFGFGFHLAGRPPTSEELAQAWSPYIL
TCIEIFGPSRCMFESNFPVDKGTCSYPVLWNTFKRITAGMSEDEKRQLYRDTAARFYRLA
>gi|319761094|ref|YP_004125031.1| regulatory protein gntr hth [Alicycliphilus denitrificans BC]
MRCANVGTFFLACPMPSNTLPEPAADVPESAADTVFHGIVQGLAQQRFVPGQRLVEVDLAAQFGVSRASV
REALQRLAAEGLVDLFRNKGAAIRTLSARETLEVLDVAERMTGLLARSAARAVAAGAPRAPIEDALARLH
EADRGQGQETFASARRALYRALLATSGSRELRRLLPTIHMPIVYAQHRPAALQRIRMRDYRAMCEAVLQG
DEDAADAAGMQHVRNVREAIEAAIASDLGQARR
>gi|319761095|ref|YP_004125032.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDFSLSPELRALRDKTRRFIAEQVIPLESDPRQSHHGPDESLRRELVARARAAGLLTPHASREMGGLGLS
HVEKAVVFEEAGYSRLGPTALNIHAPDEGNIHLMEEVATPAQKERWLRPQVAGELRSCFAMTEPSPGAGA
DPSMLQATAVRDGGDYVINGRKWFITGADGADYAIVMARMEDGSATMFLTDMDRPGIVLESNMDAMDACF
TGGHGVLRFENLRVPAADVLGEIGKGFRYAQVRLAPARLTHCMRWLGQARRAHDTALDYVRRRHAFGKPL
VEHEGVGFMVADNDMDLHTARLHIWHTAWLLDQGEKCNFESSRAKVVCSEAEWRVVDRSVQMLGGQGVTG
ETPVMRIFTDMRAFRIYDGPSEVHRWSMARKLAHLSEKAEAELLREGGAA
>gi|319761096|ref|YP_004125033.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MTAAMDRFSLRGRLALVTGASSGLGTHFAQVLAAAGARVAVAARRVDKLQGVVDAIAAEGGEARAFALDV
ADSASVRACFDALCAWGVPDVVVNNAGVTVTRPALEQTEEDFDHVLGTNLKGNWLVATEAARRMVAAGKG
GAIVNVASILGERVAGGVAPYAISKAGVVQATKALALELARHGIRVNALLPGYVVTDLNRGFLTSPAGEK
LRARIPSRRFGEVTDLDGPLLLLASDAGAAMSGATLAVDGAHLVSSL
>gi|319761097|ref|YP_004125034.1| aminoglycoside phosphotransferase [Alicycliphilus denitrificans BC]
MSGPANPLPVEALADYLRAQGLAGSAPLQVRVLAGGQSNPTYRVTAGAGRDYVLRKKPPGTLIASAHAID
REYRVMKALADTGVPVPRMLHYCESGELLGTPFYVMEYLAGRVLMDQSLPGMEPAERHAIYREMNRVIAA
LHAVDYRAVGLGDYGKEGNYVGRQIARWSRQCRESTVPMNEAMHCLMDWLPEHLPSGDETTLVHGDYRLD
NLVFHPTEPRVIGVLDWELSTLGHPLADLAYQCMAWRIPPSLWRGIAGLDLPALGIPQEAEYIAWYGAAT
GRDAAGHWDYYLAYNLFRMAAILHGIAQRAADGNAAAEDAVETGAKAGPLAELGWQAAQRYTATRK
>gi|319761098|ref|YP_004125035.1| exodeoxyribonuclease iii xth [Alicycliphilus denitrificans BC]
MFKLTSLNLNGIRSATSKGVEAWIDQNRPDCICVQEIKAQSADMQGRFEELAGLRGHFHFAAKKGYSGVG
IYTRHEPSDVLAGYGSQEFDAEGRYMELRFDTPSRRLSIISAYFPSGSSGEERQLAKYRFLDEFHPHLMR
LKAEREFILCGDINIAHRQADLKNWRSNQKNSGFLPEERAWMTKLLGDDTDGGLVDVYRRLQPDATDACY
TWWSNRGQAYANNVGWRLDYHLATPALAQLARTEAIYKGEKFSDHAPITVGYEMAL
>gi|319761099|ref|YP_004125036.1| orotate phosphoribosyltransferase [Alicycliphilus denitrificans BC]
MVTESAQGPGRDRLAQDFVRFAVESGVLRFGEFKTKAGRMSPYFFNAGLFDDGAKMGRLAQFYAQALVAS
GIEFDMLFGPAYKGIPLGATVAVELARLGRNVPFAYNRKEAKDHGEGGTLVGAPLKGRVLIIDDVMSAGT
AARESIALIRAAGATPHAIAIALDRQEKATENGRDVDHSAVQYVRRELGMQVCAIARLADLLRYLEADGG
DPQIHAHHERVLAYRQRYGVDD
>gi|319761100|ref|YP_004125037.1| hypothetical protein Alide_0372 [Alicycliphilus denitrificans BC]
MAGVRRMGGLLACAAGLALGALAPAWAQQGKTAQEVYTCIDRQGRRITSDRPIAECVDREQRVLDHTGTE
RRRIGPTLTEHERAAQEAQRRKEAEERARFLEERRRERVLLARYPDEAAHQAEREAAIDQVEEVIVVAHK
RIQALKAERRRIDVELEFYRGDPAKAPAKLQRQIAENDQALAEQQRFLVAQDLEKRRIHQRFDAELAQLR
QLWAAQRAAATQWAQPPATAPVQK
>gi|319761101|ref|YP_004125038.1| glutamyl-tRNA(gln) amidotransferase, b subunit [Alicycliphilus denitrificans BC]
MTAKLIQGYEVVIGFETHAQLATKAKIFSRASTAFGAEPNTQACAVDLALPGTLPVMNREAVACAIKLGL
ALGSHIAPESIFARKNYFYPDLPKGYQISQFEIPVVQGGEVGFYLGDEKKTVRLVRAHLEEDAGKSLHEE
FHGMSGIDLNRAGTPLLEIVTEPDMRSTEEAVAYAKALHQIVTWIGICDGNMQEGSFRCDANVSVRRPGQ
PLGTRREIKNLNSFKYMQQAIDYEIRWQIEQLEDGHAIQQATVLFDPDTGETRAMRTKEDAADYRYFPDP
DLPPLVIAPEWVEQVKAAMPELPRAMAARFVQQYGLPEYDATTLTQSQAMAAYFEDAAKACGAPKLASNW
VMGEISRRLNTEEIGMDAVKVSSQQLATLIGRIGDGTISNNAARQVFEALWSGEGSDVDAVIDAKGLKQM
NDSGALEKIIDEVIAANPANVEQYKAGKDKAFNALVGQVMKASKGKANPQQVNELLKAKLA
>gi|319761102|ref|YP_004125039.1| glutamyl-tRNA(gln) amidotransferase, a subunit [Alicycliphilus denitrificans BC]
MSSTVLHDMGVAQLAAALRGGQVSAVEAAQHFLARAKSHQHLGAYVALNEDATLAQARAQDASIAAGTAA
PLAGVPIAHKDIFVTRDFPTTAASRMLAGYRSPFDATVVARLAEAGCVTLGKLNCDEFAMGGTNENSAVA
PVGFDAPRPVRNPWDGARVPGGSSGGSAAAVAARLAPAVTGTDTGGSIRQPASFCGVTGIKPTYGRASRY
GMIAFASSLDQAGPMARSAEDCALLLSAMCGPDPDRDSTSLDRPAEDFGRALGDSLEGLRIGVPAEFFGE
GLAADVHAAVDAALKEYEKLGARLVPITLPRTDLSVPVYYILAPAEASSNLSRFDGVRYGYRAKDYADLL
DMYKKTRAQGFGDEVKRRIMIGTYVLSEGYYDAYYLQAQKLRRMIADDFQAAFKECDLIAGPVAPTTAWR
LGSQNDPVANYLADIYTLPASLAGLPGMSVPAGFGESGLPVGLQLIGNYFQEARLLNAAHRLQQATDFHL
RAPEGI
>gi|319761103|ref|YP_004125040.1| glutamyl-tRNA(gln) amidotransferase, c subunit [Alicycliphilus denitrificans BC]
MALTPQDIGRIAHLARLELSPAESERMLTQLNGFFGIVEKMRAVDTGGIAPLPHPVAAIQDVHLRLRDDV
ASEPDQREANQQSAPAVERGLFLVPKVIE
>gi|319761104|ref|YP_004125041.1| cell shape determining protein, mreb/mrl family [Alicycliphilus denitrificans BC]
MFGVFRRYFSTDLAIDLGTANTLIFARDKGIVLDEPSVVAIRHEGGPHGKKVIQAVGHEAKAMLGKVPGN
IEAIRPMKDGVIADFVITEQMIKQFIKMVHPRSVLTPSPRIIICVPCGSTQVERRAIKDAAEAAGATAVY
LIEEPMAAGIGAGLPVSEASGSMVVDIGGGTTEVGVISLGGMVYKGSVRVGGDKFDESIINYIRRNYGML
IGEPTAESIKKNIGSAFPGSEVKEMEVKGRNLSEGVPRSFTISSNEVLEALTEPLNQIVSAVKTALEQTP
PELGADIAERGMMLTGGGALLRDLDRLLAEETGLPVLVAEEPLTCVVRGCGIALERMDRQGSIFTSE
>gi|319761105|ref|YP_004125042.1| rod shape-determining protein mrec [Alicycliphilus denitrificans BC]
MPLGTLDRTAPTLFKHGPSPLSRLTLYSALALFLMVADARFHVADPLRKAVATVLYPLQWLMLQPVELAG
KGAQYFQSLQAAQQAADEASKKMAQMSVRAGEADQLLRENAELRQLLALRERLDTPAQAAQVLYDTADPY
TRRIMVDRGQLAGVEPGSPVVDAAGVLGQVTRVFPMLSEVTLLIDRDQAIPVLNLRTGARSVAYGDPVAG
PGGGMELRFTPANADVQEGDLLTTSGVDGLYPAGLPVARVLRVERRADSAFARIYCAPLAQVHGARHVMV
LKPLVADMPARPEPEPAPQKRGGRK
>gi|319761106|ref|YP_004125043.1| rod shape-determining protein mred [Alicycliphilus denitrificans BC]
MIMPKGQQLLLPVSPAFIWASLLAALALNMLPLGRVVWTPDWVMVLLVFWGMHQPQRVGLGVAFAMGLCI
DVNQSALLGQHALVYCGLMFGAQYTHRRLLWFGPLLQALQLLPLFFAAHAVELALRVVAGGGTLPGFEGL
VAPLLEAAIWPLASWILLAPQRRPPDQDDNRPL
>gi|319761107|ref|YP_004125044.1| penicillin-binding protein 2 [Alicycliphilus denitrificans BC]
MTELRNVEADTWRFRLRVFVLGVVVLLAFVLIAARLVVLQVVRHEDLADQAESNRTAIVPIVPNRGLIID
RNGVVLATNYSAYTLEITPSRAMDLEATIDELAQIVDIQPRDRRRFKRLREESRSFDSLPIRTRLTDQEV
ARFAAQRYRFPGVEIKARLFRNYPLGEVASHAIGYIGRINQREKERIEDSDDAANYRGTDYIGKLGVEQS
FESTLHGHTGFERMETSAGGHAVRRLNSHPATPGNTVMLSLDIKLQKLVEDMFGERRGALVALDPRNGEV
LALVSKPTFDPNLFVEGIDQENWQALNESINKPLLNRALRGTYPPGSTYKPFMALAALELKKRSPTQVYS
DPGFFNYGGRTFRSHEGGLGGVDMHRAIQYSSNTYFYSLAVDMGVDVIHDFMKPLGFGQITGIDLGGEVR
GVLPSTEWKRNTYKRPEMKRWYSGETVSLGIGQGYNNFTMLQLAVAEATLANGGTRYRPHLVKAVKDQVS
GQVSEVQQPPGEPLGFNPKNVAIVHNALMAVNQAGTGRRVFMGAPYTSAGKTGTAQAVSLGQNVKYNARL
LEEHQRDHSLFAAFAPVEEPRIAVAVIVENAGFGAAAAAPIVRRVFDYWLLGQYPGEQDLAAVAKGQAGA
PVGVPRRADEVSVVPEP
>gi|319761108|ref|YP_004125045.1| arginase [Alicycliphilus denitrificans BC]
MPPVTLIGAPTDVGASVLGASMGPDALRIAGIARALRTLEPDVQDMGNLSGPGNPQAAPSGGFRHLAEVT
AWSQAVFSAALAALDAGRLPLLMGGDHCLAIGSISAAARHCRLRGRRLKVLWLDAHADANTPASSPSGNL
HGMPVACLLGHGPRQLTQLAGAAPALQARQITLLGVRSVDATEKRFVNAQGIEVYDMRSIDELGMRSVMQ
AALADVDENTHLHLSFDMDGLDPTIAPGVGTPVRGGPTYRETQLCMEMLADSGALGSVDVMELNPALDVR
NQTAELAVDLLESLFGKSTLMRA
>gi|319761109|ref|YP_004125046.1| hypothetical protein Alide_0381 [Alicycliphilus denitrificans BC]
MEWIIVSLASLLAGFVDAIVGGGGLILVPALFATFTNAPPATLLGTNKSASICGTAMATWQYSRRVQMPW
RAMLPAAGAGFTGSFFGAWTVTVVSADFLRKLLPLILLAVLLYTLAKKELGRHHEPRFAGRMETALACLI
GLAIGFYDGFFGPGAGSFFVFAFVRLLGYDFLNASVSAKLLNLATNIAAIILFASKGHVWWHFALPLAVA
NVAGSLLGTHMALRHGTGFVRAIFILVVSLLILKTGYDAFLR
>gi|319761110|ref|YP_004125047.1| choline dehydrogenase [Alicycliphilus denitrificans BC]
MSDTTFDYIIIGGGTAGALLANRLSADPRSRVLLVEAGRKDDYHWIHIPVGYLYCIGNPRTDWLYQTEPD
AGLNGRSLRYPRGKTLGGCSSINGMIYMRGQARDYDQWAQITGDDAWRWDNVLPAFRRHEDHWRLDRPGN
ADEAFERLHGNKRTGSTGEWRVDRQRLRWDILDAFAQAAQQAGIPATDDFNRGTNEGVGYFEVNQKNGWR
WNTAKAFLRPTCYGRPNFELWTSAQATRLALERQPDGRLRCTGVQAWTGDEMVTAHAQRELILCAGAVNS
PQLLQLSGIGSGALLKQHGIDVVLDLPGVGANLQDHLQIRAVYKVQNTPTLNQMAASLAGKAKIGLEYLL
KRSGPMSMAPSQLGAFTRSRPGLPYPNLEYHVQPLSLEAFGEPLHGFPAFTASVCNLNPTSRGSVNIKSP
DFRAAPAIEPNYLSTPEDRQVAADSLRLTRRIVAQPALAPYRPEEYKPGPQYQSDEELARLAGDIATTIF
HPVGTTRMGHVDDPQAVLDPQMRVRDGRGGVVAGLRVVDAGAMPTITSGNTNSPTLMMAEMAAQWIRSAA
>gi|319761111|ref|YP_004125048.1| hypothetical protein Alide_0383 [Alicycliphilus denitrificans BC]
MPHIRCSPEEAFVLTIMSALTPPSVVQDGTATPRALPQGDWVAAAFADRRAWRRLAAQLKACGPGHAWSL
QGLARLDHVGAQVLWNHWGRAWPAQVDLSAAQREMLERVARFSTPCAPAPPWRLADQIDRLGVLVLRALG
HLADMVELVGQLLLDLLRLVRNPARAPWRDISGHVYQMGAKALHITALVGFLIGVVLAYLMSLQLRQFGA
EAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIAHGFRLVMPRALALGL
AMPLIALWTTLAALAGGMLAADLTMGISSAYFLQALPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRV
KPNTQSLGEGTTASVVSAITMVIVVDALFAVAFKNLGF
>gi|319761112|ref|YP_004125049.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MPGTSPVVDIRGLATVFGKGDAAFTVHDDLQLAVDRGEILSLVGGSGTGKTVLLRHILGLTRPTRGSVTV
LGRPAAELGGEGASSRVGMLFQQGALFSAFSVLDNIAFALRELGTLPHALVDAAAMVKLRLVGLKPEHAT
RMPADLSGGMVKRVALARALIMDPPLLLLDEPTAGLDPNSSDEFCGLLRELHAALGLTVIMVTHDLDTLF
ALSTRVAVLADRHVITSGTPQQVARFDHPFVDHFFRGERGRRAMAQPPAAAPASKEA
>gi|319761113|ref|YP_004125050.1| mammalian cell entry related domain protein [Alicycliphilus denitrificans BC]
MENKSHALAAGIFVIVVAALLAGLGMWLTRDQTAYQIYELSSKDSVSGLQPQAPVRYKGVAVGKVTRIGF
DPEAPGNVLIRIAVNTTAPISTTTFATLGYQGVTGLAHVQLDDADAPLPQPAPGASGLPRLPLQTSTFSQ
VAEQGPAIMAQVQQATERINTLLGDENQQRFATALQQLGAAAGSIDQLVRHLDNTVSTRLDPALAGVPAL
TQDAQQTLHALRQAGSSAAGAADEVRQAVRALNAEGGALAEIASGAKSLTTAADRFGRVTLPSLNRAADE
TARAARRLGRTATGINDNPQSLIYGPGRAAAAPGEPGFVAPPNQP
>gi|319761114|ref|YP_004125051.1| hypothetical protein Alide_0386 [Alicycliphilus denitrificans BC]
MKTIETIAVCACWKGARAVFCMMLAALAAGCSVLPAPPVRADVYDFGPGPMQPAGDAQAAVPLAPIVLAA
VDTVGMPEGSSALLYRLAYANVQQLRPYTQARWSQPPADLLAQALRERLGQRRMVLSGDGGAALQLDQIR
QASVLRVQLEEFSQIFSTPDASTGLVRVRAMLADAGPAGEALQAQRVFIARRPAATPDAAGGARALAEAA
AQVADELAHWVQQQGR
>gi|319761115|ref|YP_004125052.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MGESGPLPHSPFPSVARRIDPYSLRLFVATAQAGSIVRAAQQEHIAASALGRRLSDLEHAFGTPLLVRSP
RGIALTDAGRLVLARGRKIDDDLQALVREVQTEGDEVRGTVRLYANMSSVVGFLPERLKRFMAAYPQVAV
SLHEEDTQQVVRACLDDRADVGVGAQMAVPAGLDAWHFAQDPLHVVMPAGHPLAAQAAVGFGQVLGHALI
GVRQGGALDRTMHERAQALGQRFAPAVSVGSFDAVCRMVEAGLGIALIPRSAAAAYAGSATFALRPLDEP
WAARSLHLYALHRSPQPRAVQALLDCLRG
>gi|319761116|ref|YP_004125053.1| aconitate hydratase domain-containing protein [Alicycliphilus denitrificans BC]
MATDVSPSCGAAPAALRFNPRMLFLSRSPAPIHAALRGEPVALAAALPLRDDVSTDEITPIAILTHYDEK
LGRYPYTGLQVQGQRPVAPGALARSGIEVVVAGKRYGKGSSREHSPAAERLAGVRLVIAESFERIYRQNA
DNIGLLTSTDMGLVQRIAAGEAIALEELLVGRDALAAAIVRSGGLLRFGQACLRGMRPAPVPTAPAAPGP
RTLFEKIVARHALATAFTPAHPAAGEGAFVRADWRFIHEYYTGMAAHMLHASLGRPLALRDPASIVVFED
HTSYVEESPAHVRGGLVPDVRRMVDAQRRFVADHGLRCHRTLTEAEAARDDGSNVAGISHAMVTERYALP
GQLVVGTDSHTPHSGALGCAAFGVGTTDMANAFVTGAVRMTLPASLRVELDGRLAPGVTAKDVALHLLAL
PFIREGGGVGKVFEFAGAAIAAMSTDERATLTNMTAELGGFTGIVAPDAETVRFLRERRGVDFAPESWMR
SDPGAHYAHVIRVDCAQVGPMVAAPGDPGNGQPLARLARPVRIDIAYGGSCTAGKREDFDHYHAVLRWAA
DRGLRVAPGVALYLQFGTTAVRDHCAAAGYLDAFERVGARILQPSCGACGNCGPGGSSDPGQVTVSAINR
NFPGRGGPGSVWLASPPTVAASAIAGEILSFEELQARHA
>gi|319761117|ref|YP_004125054.1| hypothetical protein Alide_0390 [Alicycliphilus denitrificans BC]
MQTFPLTRRAALACMAASAFVLAPPGAAAQFAASDKPVRMVVPLAPGSTVDAVARALGPGLGRALGRPMV
VENVAGAGGIPGTGQVVKAPKDGSVLGMVSSNHVINPGIYKSIPYDSLKDITPIAVLATVPLVLVVHPSV
PVKTVGELLAYARARPGTLNLGSAGNGSTLHLAGELLVSETGIDIRHVPYRGTGPLVTDLMGGQVQMGFV
SVSQVAAQVKAGTLRALAVSTRQRSASLPDVPTMAEAGVPNYGFDAWIALIGPAGMPRPVVDGYAAAVRS
AMASPEAHAAIVGQGLSVLDIGPDAAPAFFQSELHKHQKLVKQSGATLD
>gi|319761118|ref|YP_004125055.1| regulator of ribonuclease activity a [Alicycliphilus denitrificans BC]
MASEQAPIRPGESTADLCDRLGPLARVCGAPLRAYGGLRQACAPVATLCAQGSADGVRAWLEQPGEGRIL
VIDGGVPEHALLGDRLAALGLANGWRGAIVHGAVRDVAALAGLDFAVLALGATPRRAAGGGAGAPGCTLE
LAGVRVAPGDWACLDRDGVVFVSARPGWETACSTRRP
>gi|319761119|ref|YP_004125056.1| multiple antibiotic resistance (marc)-related protein [Alicycliphilus denitrificans BC]
MDLKPLITLLAIVNPLAIVPFFIHYTNGFSAAQRRRTIQVAAFSAFCVIAACALVGLQILDFFNISLQSF
QVGGGLLLLISAMNMLNAQPAEAKPHTNELEAGAQKAAQGSSIAVVPLTIPLLTGPAAMSTVVIYADRAQ
TLWQHLALVGYGVVVGAATALCFALAEPIERALGKTGINVMTRLMGLILAALSVEVMADGLSKLFPILAA
R
>gi|319761120|ref|YP_004125057.1| carboxymethylenebutenolidase [Alicycliphilus denitrificans BC]
MGQWVDLTSGDGFVFPAWVARTDGAPRGAVVVLQEIFGVNTHIRSVADRFAARGYLAVAPSTFARVQKDV
DLGYGPEDMQAGMALKAAVEGLPAPGVLPDIQAAINYAARQSGRKVGVVGYCWGGLLAWRAACLAEGLSA
AVPYYGGGITSAEEVARRPRVPVLAHFGERDRWITQDGVQAFAQAHPEAQVHVYPADHGFNCDQRASYDE
AAALNARERTMAFLARYVG
>gi|319761121|ref|YP_004125058.1| drug resistance transporter, emrb/qaca subfamily [Alicycliphilus denitrificans BC]
MASPAHPAPLPPPPLTGSARTWGTLALSAATFMNVLDTSIANVSLPAIAGDLGVSPTQGTWVITSFAVAN
AIAVPLTGWLSQRFGQVRLFVASVTLFVIASLLCGLAPNMAMLIAARALQGFVAGPMIPLSQSLLLSSYP
RALAGLAMAMWSMTTLIAPVTGPLLGGWITDNMAWPWIFYINVPVGIVAVLVTWGIFHKRETVRRKLPID
SIGLALLVIWVGAMQIMLDIGKEHDWFESPWVVACALVAAVGLVAFLIWERGDDHPVVDLTLFRNRNFWA
GALATAVGYGLFFGNVVLLPLWLQQYMGYTATQAGEVMAPVGLLAMVLSPWVGKNIGRTDPRRFATFAFL
VFALVLWMRSNFNTQADLATIMVPTIVQGIAMAFFFIPLVTVTLSEITPDRIPAASGLSNFMRITAGAVG
TSIATTLWERRATLHHAQLTEGLHHGNTALAQALQGLQVGGFTPEQALAQVERLVNQQAFMLAANDIFYA
SAVLFLFLIPLVWLAHAPHASKGSADAAAGAH
>gi|319761122|ref|YP_004125059.1| secretion protein hlyd family protein [Alicycliphilus denitrificans BC]
MNAPQSPAAKPARRQALLTLAGVVVLAGAAWGLYDWLVASHYENTDNAYVQGNVIQITPQTGGTVTAILA
DETDLVRAGSALVRLDPADARVALQQAEAALAQAVRQARQLYANNATLAAQVRLREADVARAQADIARAQ
DDLRRRQMLTGDGAVSKEELQHAQSQLDTARTQLAAAQAGVAAAREQLASNQALTQGVAVQEHPSVRAAA
AKVREAYLADRRTALPAPVDGYVAKRSVQLGQRVAAGTPLMAIVPLSQVWVDANFKENQLRHLRLGQPAK
LTADLYGKKVEYTGTVAGLGVGTGAAFALLPAQNATGNWIKVVQRVPVRIALDAAQLAEHPLRVGLSMEV
TVDTKERGGPALAEAPRQEAVAQTAVYASLDEGADADVARIINANLGAR
>gi|319761123|ref|YP_004125060.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC]
MKNQLSTPPALLHAAALAAALLALTGCADMSGIAPQARLRDAATLVDPGAPAAAVAPDWWRAFGDAQLDA
LVQQALDGNPGLRQAAARIARAEAFTRSARAALGPQVNASADLTRQRYSENGPYPPGQAGSILDIDTARL
SGSWEIDFFGKNRAALESALGTARAARADADAARLLLAANVVHAYLQLARLQEQLQVAERTLAQRGEVLR
LVQQRVSAGLDTRLELRQSEGALPEARQQIEALREQAALTRNALGALAGEPKAALALTPPALAAMQSAAI
PAVLPADLLGRRPDVAAARWRVEASAQDVAVARAQFYPNVSLTAFVGLASMGLGNFVEAGSREWGVGPAL
RLPVFDAGRLRANLAGKSADLDAAVESYNAALLDAVRDAADQLASSASVERQIAEQRQAGEAAEAAYAIA
RKRYEAGLGNYLQVLSAETQVLAQRRLAVDLAARRLDAQAGVMRALGGGYAAS
>gi|319761124|ref|YP_004125061.1| regulatory protein marr [Alicycliphilus denitrificans BC]
MKSPREEDDPAGDGTCPLSDPSLPVPFEVERSIGFQLRRITTLLGAEVERRMEPLGLTDAQWKPLLRLLL
DPPGTAAALARMCHLDAGGLTRLLDRLEAKGLCQRERSLEDRRVVNIALTPEGRAVAERLPAILTGVQDE
LLAGFSEAEEAQLRDFLARIYANTRAMPGS
>gi|319761125|ref|YP_004125062.1| mg2 transporter protein cora family protein [Alicycliphilus denitrificans BC]
MPEKSPQPFRVFHLQPGVGASELAQLPGTPPAQGFYWIACTRAAFSAELPRLQAMLQAVAGLQLVDLHVS
DLLNAQLPSHYDYTSQYDLLVVRRLGTAQADAGAPLARPAARGGLPVLRRIDTSPVGFAVFDQVLLSVHP
GDCGVRDAYAARLLSQAAPAAPAATPAEAVVRELRAGPVAGARLPTSPADLMVRVVGHIVDNYLDLRREL
SRQLDHWQTELLRPSTRFTDWSALLGARLALHQLDEICEDQRAAVQAWSEALSTWTPQPDTPAALRELDL
LKVRTRDVLEHIERVVHHVRRLEQSTEAVLQMHFSVQSNRTNDIMRTLTVLTAVFLPLNLIAGIFGMNFE
FIPFVHTREGFWWAMGSMAAIAAALTVFFWRKRYLTRTGRS
>gi|319761126|ref|YP_004125063.1| porphobilinogen synthase [Alicycliphilus denitrificans BC]
MWGTITPMHLSSPTPFPANRPRRLRRDAFTRDLVRENRLTPHDFIYPVFVHEGTQLRVPVPSMPGVERLS
LDLLLPVAGECVRLGIPYLALFPSIDAQLKTPDGKEALNPEGLIPRVVRALKKEFPQLGVMTDVALDPYT
SHGQDGMLDDTGYILNDETVEILVGQALAHAQAGVDMVAPSDMMDGRIGAIRDALEAHGHIHTRIMAYSA
KYASAFYGPFRDAVGSAANLGRSNKDVYQMDPANTDEALREVALDLAEGADMVMVKPGMPYLDVLRRVKD
EFKVPTFAYQVSGEYAMLKAAAANGWLDHDKVMLEALLAFKRAGADGILTYFALDAARLLTK
>gi|319761127|ref|YP_004125064.1| biotin/lipoate a/b protein ligase [Alicycliphilus denitrificans BC]
MSDPQTFLTTIAQEQAWNHRQMLEPVAQPHFRVWTYGAPAIVLGCSQRRFEEEARARLAPGTDLLLRPSG
GGAVLVGPWMVSCSVVLPLDHPWVQGRLPDSYQGLGRLHVQVLAALGVAAEALPPAQVDAANARTGPVVP
WACYGSLAPWEVVDAAGRKLVGLAQRRQRTGVLLVAGTLVTPPDWALLCHALGQSGDEAAMRRRTVSCSQ
LGAPAPDAQRLARALHEVLGSGLAPAACRC
>gi|319761128|ref|YP_004125065.1| uncharacterized protein family upf0093 [Alicycliphilus denitrificans BC]
MLWVKAFHIVFIASWFAGLFYLPRIFVNLAMVQPGSVAERDRLLLMARKLLRFTTLLALPAIGLGLWLWL
GYGIGMGPGNGWLHAKLAVVVLVVLYHWVCARLLRALTDNTDQHGHRWFRWFNELPVLLLIAAVVLVVVK
PF
>gi|319761129|ref|YP_004125066.1| vanz family protein [Alicycliphilus denitrificans BC]
MHKTSAWPLALIYAALIVFASLFPFEGWREQGISPWVFFTARIPPPYWTWFDVNLNVAGYAPLGFLLALA
LLRTGWPRAAVPVAALAGALLSFAMEYLQIYLPRRVPSNMDLALNAAGALLGALAAALLERLGAIARWSR
FRELWFVPQARGALVLLALWPWALLFPAALPFGLGQVWDRLEAALTELLEDTPFIGWLPVREPVLEPLSP
GGELLAVALGLLIPCLLGYGVMRHVGRRVVFALAAATVGVAVTALSALLSYGPTHAWEWLTPAARAGLGV
GLGAALALAAVPRRASAALLLLALMLHLNLLNEAPASAYFAQTLQAWEQGRFIRFYGLGQWLGWLWPYAA
LMYVVLHVSRRDTQS
>gi|319761130|ref|YP_004125067.1| ferredoxin-like protein [Alicycliphilus denitrificans BC]
MSDTTTPYYQRHIFFCLNERSNGENCCAQHGAQQAFERCKMLVKQQGLMGPGKVRVNKAGCMDRCAGGPI
AVVYPEGVWYTYVDEADIDEIVESHLKNGVVVERLRTPPELGR
>gi|319761131|ref|YP_004125068.1| transmembrane protein [Alicycliphilus denitrificans BC]
MNAQTERLSLTGPAGAIEAVRDAPVAGAPVRGVAVIAHPHPLFGGTMDNKVVQTLARAFVASGFAAVRFN
FRGVGGTAGVHDAGDGELDDLLGVVRQVAPEGPVALAGFSFGAFVTSHALARLWGERRVESAVLVGTATS
RFTVAPLPPEAHMRTLVVHGEHDETVPLATVMDWARPQTLPVTVVPGGGHFFHGQLPLLKGLVMRHLQSM
P
>gi|319761132|ref|YP_004125069.1| beta-lactamase [Alicycliphilus denitrificans BC]
MKSLLSSLRSLACAALMAPAILWAQAPQPPEIAARNYLLVDVTAGQVLAAKDIDAPVEQASLTKLMTGYL
VFDALRAKKITLEQRLPVSERAWKMPGSRMFIDPKMQVPVDDLLKGMIVQSGNDATMALAEGVGGTAENF
VRLMNEQAKALGMKNTAYKNPEGLTEPGHTTTARDLATLATRLIQDFPEYMHYYSTKQYRYEGTPASNSN
NRNTLLFRDPTVDGLKTGHTAAAGYCLVATSKRDFPNVGQRRLLSIVLGAASENSRANESQKLLNWGYTA
FDAVKLFDAGQAADTPAVWKGTQSTLKIGRPDAIVVTVPSGSAGKLSTEIVRKDPLIAPFTKGQPIGALK
VRLGGEQVAEVPLVALEDVGQAGIFGRAWDAIRLWIK
>gi|319761133|ref|YP_004125070.1| ribosomal protein s12 [Alicycliphilus denitrificans BC]
MPTINQLVRQGRTVEVVKSKSPAMENCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGE
GHNLQEHSVVLVRGGRVKDLPGVRYHIVRGSLDLQGVKDRKQARSKYGAKRPKKA
>gi|319761134|ref|YP_004125071.1| ribosomal protein s7 [Alicycliphilus denitrificans BC]
MPRRREVPKREILPDPKFGNVELSKFMNVIMEGGKKAVAERIIYGALELIEKKQPEKDALEVFVTAINNV
KPMVEVKSRRVGGANYQVPVEVRPVRRLALSMRWIKEAARKRSEKSMAQRLANELMEATEGRGGAMKRRD
EVHRMAEANKAFSHFRF
>gi|319761135|ref|YP_004125072.1| translation elongation factor g [Alicycliphilus denitrificans BC]
MARKTPLERYRNIGISAHIDAGKTTTSERILFYTGVTHKLGEVHDGAATTDWMEQEQERGITITSSAVTC
FWKGMDLSRPEHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKHKVPRLAF
VNKMDRTGANFFKVYDQMKLRLNANPVPIVVPIGAEDSFQGVVDLLKMKAIIWDEASQGMKFEYGEIPAE
LVDTCKKWRENMVEAAAEASEELMNKYLEEGDLSEAEIIAGLRQRTIATEIQPMLCGSAFKNKGVQRMLD
AVLDLLPSPVDIPDVAGTDPDDHEKHLTRKADDNEKFSALAFKLMTDPFVGQLTFVRVYSGVLNKGDTVY
NAVKGKKERIGRIVQMHANERQEIEEIRAGDIAACVGLKEVTTGDTLCDLDAPIMLEKMVFPEPVIAQAV
EPKSKADQEKMGIALSRLASEDPSFRVRSDEESGQTIIAGMGELHLEIIVDRMKREFGVEANVGKPQVAY
RETIRNTVKDVDGKFVRQSGGKGQYGHVVFRLEPNEPGKGFEFLDEIKGGVVPREYIPAVQKGVEEALTS
GVLAGYPVVDVKVALTFGSYHDVDSSEQAFKMAAIFGFKEAAKKANPVILEPMMAVEVETPEDYAGTVMG
DLSSRRGMVQGMDDMVGGGKAIKAEVPLSEMFGYATQLRSMTQGRATYTMEFKHYAEAPRNVAEAIIAAR
AK
>gi|319761136|ref|YP_004125073.1| translation elongation factor tu [Alicycliphilus denitrificans BC]
MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLAKKFGGEAKGYDQIDNAPEEKARGITINTSHVEY
ETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLARQVGVPYIIVFLNKCDM
VDDEELLELVEMEVRELLDKYEFPGDDTPIIRGSAKLALEGDQSDKGEPAILKLAEALDTYIPTPERAVD
GTFLMPVEDVFSISGRGTVVTGRVERGIIKVGEEIEIVGIRETQKTTVTGVEMFRKLLDQGQAGDNVGLL
LRGTKREDVERGQVLCKPGSIKPHTHFTAEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPADK
EMVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE
>gi|319761137|ref|YP_004125074.1| ribosomal protein s10 [Alicycliphilus denitrificans BC]
MSKQKIRIRLKAFDYKLIDQSAAEIVDTAKRTGAIVKGPVPLPTRMKRFDILRSPHVNKTSRDQLEIRTH
QRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ
>gi|319761138|ref|YP_004125075.1| 50S ribosomal protein l3 [Alicycliphilus denitrificans BC]
MSLSNSLGLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTKPEA
GHLAKAGVEAGEIIREFPVTAEVAGKYAAGATVPVADVFAVGQKVDVQGTSIGKGYAGTIKRHNFGSQRA
SHGNSRSHNVPGSIGMAQDPGRIFPGKKMTGHLGDATVTTQNLDVVRIDEARQLLLIKGAVPGSKGGFVT
VRPAVKAKASKGAN
>gi|319761139|ref|YP_004125076.1| ribosomal protein l4/l1e [Alicycliphilus denitrificans BC]
MQLELLNEQGQAASKVDVPETVFDRQYNEDLIHQIVVAYQANARQGTRAQKDREQVKHSTKKPFKQKGTG
NARAGMTSSPLWRGGGRIFPNLPEENFTQKINKKMYRAGMAAILSQLAREGRLAVVDSLKLESPKTKVLA
DKFKAMNLQSVMVIADEVDENLYLASRNLKNVFVVEPRYADPVSLVHYKKVLVTKGAIDKLKEMFA
>gi|319761140|ref|YP_004125077.1| ribosomal protein l25/l23 [Alicycliphilus denitrificans BC]
MSTLKFDEGRLMQVLVAPIVSEKATMVAEKSNAVTFKVLQNATKPEIKAAVELMFKVEVKGVSVVNTKGK
TKRFGKTMGRRDNVRKAYVLLKEGQELNLSGEAA
>gi|319761141|ref|YP_004125078.1| ribosomal protein l2 [Alicycliphilus denitrificans BC]
MAVIKLKPTTPGQRGTVKISRDHLYKGDAFAPLLEPQFQKAGRNNNGHITTRHKGGGHKHHYRVVDFRRN
KDAIPAKVERIEYDPNRTAHIALVCYADGERRYIIAPRNLEVGASIVSGSEAPIRVGNTLPIRNIPVGST
IHCIELKPGAGAQIARSAGTSATLLAREGVYAQVRMRSGEVRRIHIECRATIGEVANEEHSLRQLGKAGV
KRWMGIRPTVRGVAMNPIDHPHGGGEGRTGEGRHAVDPWGNLTKGYRTRNNKRTQTMIVSRRKK
>gi|319761142|ref|YP_004125079.1| ribosomal protein s19 [Alicycliphilus denitrificans BC]
MTRSLKKGPFVDHHLLAKVEKAIATKDKKPVKTWSRRSMVLPEFIGLTIAVHNGKQHVPVYVTDQMVGHK
LGEFALTRTFKGHPADKKAKK
>gi|319761143|ref|YP_004125080.1| ribosomal protein l22 [Alicycliphilus denitrificans BC]
MSETRAVLRGVRLSVDKGRLVADLIRGKKVDQALDILTFTQKKAAGIVKKVLESAIANAEHNDGADIDEL
KVKTIFVEQGTTLKRFTARAKGRGNRISKPTCHIYVTVGN
>gi|319761144|ref|YP_004125081.1| ribosomal protein s3 [Alicycliphilus denitrificans BC]
MGQKIHPTGFRLSVSRNWASRWYASNRDFAGMLAEDIKVREFLKAKLKNAAVSRILIERPAKNARITIYS
ARPGVVIGKKGEDIENLKKELATRLGVPVAVNIEEVRKPEIDAKLIADSITQQLEKRIQFRRAMKRAMQN
AMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRADIDYGTSEAKTTYGVIGVKVWVYKGDTLGR
GDLPVAETPRPDDERRPRGPRRDGRPGDRAGRGGRRPMGGNAAPADGSDKPQGAGGADTTAVKRVRKTDA
PATAADGKGE
>gi|319761145|ref|YP_004125082.1| ribosomal protein l16 [Alicycliphilus denitrificans BC]
MLQPARRKFRKEQKGRNTGIATRGNSVAFGDFGLKCTDRGRLTARQIEAARRAISRHVKRGGRIWIRVFP
DKPISTKPAEVRMGNGKGNPEYYVAEIQPGKVVFEIVGVPEELAREAFRLAAAKLPLRTTFVARQIGA
>gi|319761146|ref|YP_004125083.1| ribosomal protein l29 [Alicycliphilus denitrificans BC]
MTKAAELRQKDVAGLEAEIKSLQKAHFGLRMQKATQQLGNTATLKATRRDIARAKTILAEKQAAK
>gi|319761147|ref|YP_004125084.1| 30S ribosomal protein s17 [Alicycliphilus denitrificans BC]
MTEAKPSLKRTLVGKVVSDKRAKTVTVLVERRVKHPIYDKIMIKSSKYHAHDENGEYKMGDTVEITESRP
LSKTKNWVATRLVQKAALV
>gi|319761148|ref|YP_004125085.1| redoxin domain protein [Alicycliphilus denitrificans BC]
MIKVGDQLPTATLMEYVEVEGNGCSIGPNPVDVQKAAAGKTIALFAVPGAFTPTCSAKHVPGYVEQAEAL
KAAGVDEIWCLAVNDAFVMGAWARDQKTAGKVRMLADGDAAFAKAVGLTLDLNGKGLGLRSNRYSMLVKD
GKVATLNVEAPGKFEVSDAATLLAQAKS
>gi|319761149|ref|YP_004125086.1| gcn5-related n-acetyltransferase [Alicycliphilus denitrificans BC]
MDHRPVVTLLSPTLPHEMEAVRKIFQEYADSLDVDLSFQAFADELATLPGDYAPPRGHLLLAEVEGSIAG
CCALRPLDTADYPNACEMKRLYVRKAFRGFGLGRQLAEAVLDLARQAGYACVLLDTLDGMESARALYAEL
GFVEIPPYYHNPIAGSHYLKADIF
>gi|319761150|ref|YP_004125087.1| cytochrome b561 [Alicycliphilus denitrificans BC]
MACGADAAAGHNGRIFLGLGSAHHAAHGTRLGLPTRLFHWAIVATTIALVVTAKVGGNAMPWHMRLGLGL
LMLALLAFRLAWGLVGGHWSRFANFLYSPGHLSGYLAGRGDETRDDVGHSPLGALSVFTLLAQVCSRLRS
DDQIASAGPLAHLAPGEWVDLASWYHKDVGQYLLVAFVVLHLCAIAFYTLVRRRPLVRAMVRGDKQLPRP
APSARDDLASRIGAAAILAAACVLAWWVAGLG
>gi|319761151|ref|YP_004125088.1| redoxin domain protein [Alicycliphilus denitrificans BC]
MGFKKWLVAGAVAAGVAVGAVVVLGSGQSVAPQSTFVLLDGSQQTTADLKGKVTLVNFWATSCTTCVAEM
PEIVATYDKYKDKGFETLAVAMSYDPPSYVVNFTETRKLPFKVAIDNTGAVAKAWGDVKLTPSTFIVNKR
GEIVKSYVGAPDFGELHKLIERLLAEA
>gi|319761152|ref|YP_004125089.1| hypothetical protein Alide_0425 [Alicycliphilus denitrificans BC]
MPAWDWAGREKFAGPGACLGIMPAMSRPTACLPVAASALALLACSPALDWRSVPLPEAGITLSLPCKPER
AARPVDLGAGVVELSMVGCRADGATFALSHMPLADPSQAGAALARWRTAVLARMQAGPKAQAGTAFVPRQ
ALDLPQSLRMVVRGRGADGAEVVAEAVWFARLEGRQARLYHAVVYAPQPRTAAADTFFTGLALAAVSAQR
RHRAAP
>gi|319761153|ref|YP_004125090.1| pts system fructose subfamily iia component [Alicycliphilus denitrificans BC]
MNTRLLIIAHAPLAHALRECALHVFSDCADDLLALDVPPDEPPEQTLSKARALLAQHGQAPVLVLSDLFG
ATPCNVARRLVDDVHARLIAGVNLPMLLRAVCYRAEPLDALAARALAGGTQGMLQVAAESNPTRTS
>gi|319761154|ref|YP_004125091.1| phosphocarrier, hpr family [Alicycliphilus denitrificans BC]
MIKSTITISNKLGLHARASAKLTKLAGSYPCDVWMSKGERRINAKSIMGVMMLAAGLGSQVEIETDGTQE
QDAMDALLALIDGKFGEGE
>gi|319761155|ref|YP_004125092.1| phosphoenolpyruvate-protein phosphotransferase [Alicycliphilus denitrificans BC]
MTFSIHGLAIARGIAIGRAVLAASGSMEVAHYFIEPEQVQAEIARVRGGRNAVIEELQRLQADMPPDAPP
ELAALLDVHLMLLQDEMLVSGVKHWITDRLYNAEWALTTQLEIISRQFDEMEDEYLRERKADLAQVVERI
LRRMKGVAGPMAPPPSRARRQAEAGAEAEYLQGDAADVPLVLVAHDLSPADMLQFKQSVFAGFVTDVGGK
TSHTAIVARSMDIPAVVGARLASQLVRQDDWIIIDGDAGTVIVDPTPIILAEYGFRQRQLALERERLTRL
RHTPAVTLDAQAIELLANIEQPGDAAAALRAGAVGVGLFRSEFLFMGRGGRLPDEDEQYLAYREAVQGME
GLPVTIRTVDVGADKPLDKGYKDRSLNPALGLRAIRWSLSDPAMFRTQLRAMLRAAAHGPVRLLFPMLAH
VSEIRQTLAQVDLARAELDARGAVYGPVQLGAMIEVPAAALIVQQFLRYFDFLSLGTNDLIQYTLAIDRA
DEAVAHLYEPLHPAVLRLVADVIAEGARQGKSVSVCGEMAGDVGMTRLLLGLGLRSFSMQPAQILAVKQE
VLRVDARKLADWALQVLASDDPAAMLAQ
>gi|319761156|ref|YP_004125093.1| lipoic acid synthetase [Alicycliphilus denitrificans BC]
MSTPEIVREAQSAEAYNPLAKQKAAAKLSRIPIKVERGEVLKKPEWIRVKAGSPTTRFYEIKQILREHKL
HTVCEEASCPNIGECFGHGTATFMIMGDKCTRRCPFCDVGHGRPDPLDKEEPLNLAKTIAALRLKYVVIT
SVDRDDLRDGGSGHFVECIQRIRELSPATQIEILTPDFRGRDDRALEILKAAPPDVMNHNLETVPRLYKE
ARPGSDYQFSLNLLKKFKALHPGVPTKSGLMVGLGETDEEILQVMRDMRAHGIDMLTIGQYLAPSNSHLP
VRRYVHPDTFKMFEAEAYKMGFSHAAVGAMVRSSYHADQQAHAAGV
>gi|319761157|ref|YP_004125094.1| lipoate-protein ligase b [Alicycliphilus denitrificans BC]
MQLRVLGRAGYADTVAAMQRFTEERTGDTADELWICEHPPVYTQGIAGKRDHILVPGDIPVVATNRGGQV
THHGPGQVVAYPLMDLHRAGYYVKEYVHRIEEAVIRTLGHYGVTGHRVAGAPGIYVRPDDPGSHVRLPQR
PLRREPGSAAPVPDFTGLAKIAALGIKVARHCTYHGVALNVAMDLEPFSRINPCGYAGLQTVDLSTIGVH
TTWDDVAAVLGKQLASRLAP
>gi|319761158|ref|YP_004125095.1| hypothetical protein Alide_0431 [Alicycliphilus denitrificans BC]
MTTPANPPATDPRKDSLIEYPSRFPIKVMGANVNGFVHAVTEVARRFDPDFDASTIELRDSRAGNYLGVT
ITITATSREQLDDLYRALSSHPMVKVVL
>gi|319761159|ref|YP_004125096.1| ATP synthase i chain [Alicycliphilus denitrificans BC]
MEWRKRQPRLSVWRIVAVQAVVGVLAALLALLLTGRAQWAWSVGYGALSVVVPAALFARAMARRRTSAGA
AVAGLFGWELVKIVVTVAMLAAAPRLVPGLSWLALLAGMVVTMKAYWVALLARPGVRRTD
>gi|319761160|ref|YP_004125097.1| ATP synthase f0, a subunit [Alicycliphilus denitrificans BC]
MAAEANAPTASEYIVHHLQHLQNVKQGFIVDFSVVNLDSIAISVLLGALMLLIFWSAARKASAGVPGRFQ
AAVEILVEMVDNQAKANIHNAQSRKFIAPLALTVFVWIFLMNAMDMLPVDLLPWLWQHGTGDHHAYLRVV
PTADLSTTLGLSSAVLLLCFYYSIKIKGLGGWIHELFTAPFGTSKNPLFAAILGVVNFAMQVIEYLAKTV
SHGMRLFGNMYAGELVFMLIALMGGAAAMSLSGVLLPVGHIIAGSIWAIFHILIITLQAFIFMMLALIYL
GQAHDAH
>gi|319761161|ref|YP_004125098.1| ATP synthase f0, c subunit [Alicycliphilus denitrificans BC]
MENILGLVALACGLIVGLGAIGASIGIALMGGKFLESSARQPELINELQTKMFILAGLIDAAFLIGVAIA
LLFAFANPFVLA
>gi|319761162|ref|YP_004125099.1| ATP synthase f0, b subunit [Alicycliphilus denitrificans BC]
MSINATLFVQAIVFLILVWFTMTFVWPPIAKALDERAQKIADGLAAADRARTELAAADQRVKQELAAASN
ETANRLADAERRAQAIIEEAKARATEEGNKIVAAARAEAEQQAIAAREALREQVAALAVKGAEQILRKEV
NAGVHADLLNRLKTEL
>gi|319761163|ref|YP_004125100.1| ATP synthase f1, delta subunit [Alicycliphilus denitrificans BC]
MAELATIARPYAEALYKACTGKAGTDLNGACAWVDELAAIAANPQLRQLLDNPKVTAEQLFDVITGVAKT
ALPEMAHNFLRTLLDNGRVQVLPEIATQFRALVNQGNGSSDAVVYSAFPLDANALAELSATLQKRFARTL
NLSVQTDESLIGGVRVVVGDEVLDTSVKARLEQMKAALTA
>gi|319761164|ref|YP_004125101.1| ATP synthase f1, alpha subunit [Alicycliphilus denitrificans BC]
MQLNPAEISELIKSRIEGLAASSDIRNQGTVVSVTDGIVRIHGLSDVMQGEMLEFPADADGQPSYGLALN
LERDSVGAVILGAYEHISEGDTVKCTGRILEVPVGPELIGRVVNALGQPIDGKGPINAKMTDVIEKVAPG
VIARQSVDQPLATGQKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIIAQKGQGVTCIYVAIGQKASSI
KNVVRSLEQAGAMDYTIVVAASASESAAMQYVSAYSGCTMGEYFRDRGQDALIVYDDLSKQAVAYRQVSL
LLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPVIETQAGDVSAFVPTNV
ISITDGQIFLETSLFNAGIRPAINAGISVSRVGGAAQTKLIKGLSGGIRTDLAQYRELAAFAQFASDLDE
ATRKQLDRGARVTELLKQPQYSPLPISLMAASLFAVNKGFMDDVDVKKILPFESGLHQFLKTSHAALLER
LEQNRAFDKEGKDEAELTQAITAFKKSFV
>gi|319761165|ref|YP_004125102.1| ATP synthase f1, gamma subunit [Alicycliphilus denitrificans BC]
MAAGKEIRGKIKSVENTKKITKAMEMVAASKMRKAQDRMRAARPFAEKVRNIAAHLGEANPEYVHPFMKV
NDAKAAGVIVVTTDKGLCGGMNTNVLRAVTSKLRELQSQGVEAQAVAIGNKGLGFLNRIGAKVVAQSVGL
GDTPHLEKLIGPVKVLLDAYAEGKINAVYLSYTKFINTMKQESVVERLLPLSSEQMKADKSGPSWDYIYE
PDAQTVIDELLVRYVESLIYQAVAENMASEQSARMVAMKAATDNAGNVINELKLVYNKTRQAAITKELSE
IVAGAAAV
>gi|319761166|ref|YP_004125103.1| ATP synthase f1, beta subunit [Alicycliphilus denitrificans BC]
MAQVQGKIVQCIGAVVDVEFPRDQMPKVYDALKLEGSALTLEVQQQLGDGIVRTIALGSSDGLKRGLMVT
NTGNPITVPVGKATLGRIMDVLGNPIDERGPVSQELTASIHRKAPAYDELSPSQELLETGIKVIDLVCPF
AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMSDSKVVVQEDLSQSKV
AMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLA
EEMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLDSTSR
QLDPHVVGEEHYGVARAVQGTLQRYKELRDIIAILGMDELAPEDKLTVARARKIQRFLSQPFHVAEVFTG
SPGKYVPLAETIRGFKMIVNGECDHLPEQAFYMVGTIDEAFEKAKKLAN
>gi|319761167|ref|YP_004125104.1| ATP synthase f1, epsilon subunit [Alicycliphilus denitrificans BC]
MNTIHVDVVSAEESIFAGEARFVALPGEAGELGILPKHTPLITRIKPGSVRIEMADGSEEFVFVAGGILE
VQPDCVTVLSDTAIRGKDLDDQKAQEARAAAEEALKNAKSEIDIARAQSELAIMAAQIAALRKYRQKH
>gi|319761168|ref|YP_004125105.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MGVSRAALSQHLKALEQRLDVRLLHRTTRDMSLTEEGQRLFDALQGALASVERALAEPSGLIRINTSRVA
AQALLEPHLAEFLARYPRLRVELVLADGFSNIVADGMDAGIRLGESLDEHMVAVPITPMVRMAVVGSPGY
FERHGTPAEPADLMRHNCLAYRFTSSGAIDRWSFTSPDAEGRTIVLEPQGNAVFNDDESMLRAALQGVGL
VKHLDLCMRQHLASGALVRVLQPWCAPFPGFFLYVPSRAQMPAKIRALMDFLVGKRAALQ
>gi|319761169|ref|YP_004125106.1| hypothetical protein Alide_0445 [Alicycliphilus denitrificans BC]
MAKTRTGFLHRLARLLRHRWADGGLHQALPPKLLERLGRRVSASERRHTGQIRICVEGGLPLSYLWRGAS
VRERAVTQFGKLRVWDTEHNNGVLIYLLLAEHAIEIVADRGLAHAVPAGTWRDMADHMAQAFREGRYEDG
LTLALAEVSALLVEHFPAAPGQPGARSNELPDTPVVG
>gi|319761170|ref|YP_004125107.1| hypothetical protein Alide_0446 [Alicycliphilus denitrificans BC]
MPLALVLQALIAISLVAIGAPGATAQPLRAVPALTARVIDQTATLSEGERQALEAQLAAIEQQHGSQVVV
LMVPTTAPEDIAAFANRVGNAWKIGRRDVGDGVLVIVAKDDRRMRIEVAKALEGAIPDIAAARIIDGAMK
PRFRENDFAGGLDAAVRQIGARIAGESLPPPKGEGQRRPDGAGWEDLAIFLFFGVLVAGPVVRALFGQRL
GALVMGGGVGVLAFLATASVLLAAGAGIAALFYTWAFAGRGAPIVWNGGGWGGGRGGGWSGGGGGGGFRS
GGGGDFGGGGASGDW
>gi|319761171|ref|YP_004125108.1| lema family protein [Alicycliphilus denitrificans BC]
MKRLIATIAAALALSGCGYNDFQRLDEQSKAAWSEVLNQYQRRADLVPNIVATVKGEAAFEQETLTKVIE
ARAKATSIQVTPELLNNPEAFNKFQQAQGELSSALSRLMVVAERYPQLQANQAFRDLRVTLEGTENRITV
ARNRYIQTVQEYNVLARSFPTNITAMVFSYAPKPSFTVQNEAQISAPPTVDFSSPAAPASK
>gi|319761172|ref|YP_004125109.1| hypothetical protein Alide_0448 [Alicycliphilus denitrificans BC]
MHGAWLMTQSSMRAAVLAGTPDELEIIFYDALRAGDLDRVMACWADEDDIVCIHPGGLRLIGLAAIRSAF
AAMLRHGGLGVRTQRVGCVQTLASAVHSVLEHVSVMLPDGPREAVVCATNVYHKTPRGWCLVTHHASPGV
VGEGAAPAAAAHVLH
>gi|319761173|ref|YP_004125110.1| hypothetical protein Alide_0449 [Alicycliphilus denitrificans BC]
MDDIVRQAIAKWPHVPDCYAWLGLDARGQWYLRDEGTQARGGFRAARGVRLEHAKLIDFIHRNYEADARG
CWFFQNGPQRVYVELEAAPLVWRVNAAGEAVAHTGAPAGGVQECLVDEEGRVYLTSPMGLGLVHSLDVDC
VAQQIEQGRWQPREVRAADLPAACGFVPSPAALARTGA
>gi|319761174|ref|YP_004125111.1| cytochrome c class i [Alicycliphilus denitrificans BC]
MSDTHDEAHSGMIKSPKQFLLSAIFAFVLPVFIIIGLVVFVTSGNKPNAGVDNAEMAIAQRLQKVGSVQV
RDANRPLRSGEEVFKGQCAACHATGAAGAPKLADAAAWGPRIKTGFEALVQSALKGKGAMAPQGGGDFND
TEIARGVAYMANAAGAKFAEPAAPAAADAAPAAAPAAAEAPPAAAAAAPAAAAPAGGAGQAAGKAVYEST
CVACHGTGVAGAPKFGDKAAWAPRLAAGFDEVLKIATQGKGAMPPKGGSTASAADFKAAVEYLVNSAK
>gi|319761175|ref|YP_004125112.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC]
MHKHTLPRTRPARALSPLVIAALLAGCSFIPKYERPAAPVPEAFALAGNDVPATARAAADIDWKDYFTDP
RLQRLIGIALGNNRDLRVAMLNVEQARAQFQIQRAGQFPTVNAIASGTRQPSIVNGQYANQFQAGLGISA
WEIDFFGRIGALKEQALAQFLATEEARKSAQISLVAAVASGWLTLMADEELLDISRRTLETREESVKLTR
LRLEHGVSSELDSHQAESLAQAARATYAQQQRQRLLDENALALLLGQPLPDDIRASLPSMRLADAAPMQP
LPAGLPSDLLQRRPDIRQAEQLLIGANANIGAARAAFFPRISLTAQFGSVSDELSGLFKSGSWAFSLAPQ
LALPIFDAGRNQAGLESARAGREIAVAQYEKSIQTAFREVSDALAGQATLQQQIDAQRAQTQADAKRLDL
SDLRYRNGVASYLDLLDAQRSLYATEQALVQTRLQQLQNQVTLYKVLGGGWTDTGGGPARS
>gi|319761176|ref|YP_004125113.1| transporter, hydrophobe/amphiphile efflux-1 (hae1) family [Alicycliphilus denitrificans BC]
MAKFFIERPIFAWVVAIFIMVAGAVSITQLPIAQYPAVAPPTIQVSVAYPGATAQTLEDSVLAVIEREMN
GATGLAYMEATAQANGTGSIVLSFEPGTNDDLAQVDVQNRLSRATPRLPAAVTQQGVRVEKSRSNFLLFS
MLTSETPNVSIDALNDYAARNIVPELQRLPGVGSVTQFGSERAMRVWIDPAKLKGFNLSLDQVNAAIRAQ
NVQVSAGNLGDLPSAQGQTTTATIVVQGQLSTTEQFGNIVLRANTDGSTVRLRDVATLELGAQSYSTSAR
LNGSPAVGMGVQLTPTANALATAKAVKARLAELQQYFPQGVKYTIPYDTSTFISVSIEKVVHTLLEAVVL
VFLVMFLFLQNFRYTIIPTIVVPVALLGTFGALLAMGFSINVLTMFGMVLVIGIVVDDAIVVVENVERIM
SEEGLPPLQATRKAMDQISGAIVGVTVVLVSVFVPLAFFAGSTGNIYRQFAATMATSIAFSAFLALSLTP
ALCGTLLKPVDAGHHMEKKGFFGWFNRAFKSTTHRYESGLARLVRRGGRMAVIYAALIGAVAIVYTRLPT
SFLPNEDQGYLITNVQLPAGASLERTRAALTQVENFALKQPEVNNIVTVAGFSFSGQGQNAGLAFVTLKD
WSERPGPEHSAAAIAGRAMGALMGYRDAFIFALSPPPIPELGTATGFTFRLQDRGSKGHAALVAARNQLL
GMAAQSKVLAGVRPDGMEDAPQMQIDIDRDKASALGVSFDAIGSALSTALGSTYVNDFPNQGRLQRVVVQ
ADARARMQPEEVLDIPVLNNKGQVVPLSTFATTRWLTGAMQTVRYNGYPSMKIAGDAAPGFSTGDAMAEM
ERLAAQLPEGFGFEWTGQSREEKLAGSQAMVLYAFSLLAVFLCLAALYESWSIPFSVLLVVPLGVLGVLL
ATLLRGMSNDVYFQIGLVTIIGLSAKNAILIIEFAKDLQASGKSVIQAALEAAHLRFRPIVMTSLAFTLG
VLPLFLASGASSASQRAIGTGVIGGMITGTLLAVIFVPVFFVVVRSFFKGSQRQREHDAKHAMQHHSDSA
A
>gi|319761177|ref|YP_004125114.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus denitrificans BC]
MPRLNNNKNARPVRRFVRRPAAALSIALAAALALAACGKKDAAPAGAGGPPPAPQVGVVTVQPGDIGLVT
ELPGRLEASRIAEVRARAAGILQKRLFAEGSDVKAGQKLFLIDSAPYEAALAQAQASVAQAEASLAQSRA
LAERYRPLVAVNAISKQEYDNAVAAQKTAEANVAAAKAAVTTARINLGYATVTAPISGRIGRALVTEGAL
VGQGTPTEMAVIQQIDPLYINFTQSASEALKLRAAMASGKYKKAGANAANVSVVLEDGSVHKQPGRLLFT
DLTVDATSGQVTLRAEVPNPDRSLLPGLYVRVRLEQAQVDNGVLLPQQAVTRTGAADTVMVVGEGGRVSP
RPVKLGPAQGTNWVVLDGLKAGEQVMVDGFQKLPRVKPGDPMVVQPVPWQANGAAKAPAQAASAAASQPA
ATPAKQ
>gi|319761178|ref|YP_004125115.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MARRTKEDADATRNALLDAAELVFYEKGVARASLSEIAQAAGATRGAIYWHFKDKVDLFNAMMDRATLPL
EGVCNAGEAAYAKEPLVQLRGMVELLLRSVVSDAHMRRVFEIALYRVEYVSELSGVRERHLAAHARFQAL
LERNLSLAAAQASLALPMSAAMAAAGLHALFNGLLQSWLLGEASFDLPATGRAAVDAYLRGLGFHV
>gi|319761179|ref|YP_004125116.1| translation elongation factor tu [Alicycliphilus denitrificans BC]
MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLAKKFGGEAKGYDQIDNAPEEKARGITINTSHVEY
ETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLARQVGVPYIIVFLNKCDM
VDDEELLELVEMEVRELLDKYEFPGDDTPIIRGSAKLALEGDQSDKGEPAILKLAEALDTYIPTPERAVD
GTFLMPVEDVFSISGRGTVVTGRVERGIIKVGEEIEIVGIRETQKTTVTGVEMFRKLLDQGQAGDNVGLL
LRGTKREDVERGQVLCKPGSIKPHTHFTAEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPADK
EMVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE
>gi|319761180|ref|YP_004125117.1| preprotein translocase, sece subunit [Alicycliphilus denitrificans BC]
MATSQVETVTTGADKAKLFAAVAIVLASVAGFYVLGKQGPLIQWGALVLGLVLAVVMFLTSEHGRQFMGF
SRDAWREVKKVVWPTRKETLQMTGYVFAFVVLMALFLWLTDKTLEWVLYDLVLGWRK
>gi|319761181|ref|YP_004125118.1| transcription termination/antitermination factor nusg [Alicycliphilus denitrificans BC]
MVDAVETNGAQPPVDASVNPDLRWYIVHAYSGMEKAVERNIQERIVRSGMQHKFGRILVPTEEVVEMKNG
QRKTTERRLFPGYVFVEMVMDDDTWHLVKHTSKVTGFVGGVKNRPAPISEEEVQKIVSQMQQGTDKPRHK
IEFMVGELVRVKEGPFTDFNGSVEEVNYEKNRLRVSVMIFGRSTPVELEFGQVEKT
>gi|319761182|ref|YP_004125119.1| ribosomal protein l11 [Alicycliphilus denitrificans BC]
MAKKIVGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQGVEPGLPLPVVITAFADKSFTFI
IKTPPATTLIKKAIKLEKGSSNALSTKVGKITRAQLEEIAKTKLKDMNAASVDAAVRTLAGSARSMGVTV
EGL
>gi|319761183|ref|YP_004125120.1| ribosomal protein l1 [Alicycliphilus denitrificans BC]
MAKLTKKQKAQQGKVDSTKLYPFAEAVALVKEAATAKFDESIDVAVQLGVDAKKSDQVVRGAVVLPNGTG
KTTRVAVFAQGAKAEEAKAAGADVVGMDDLAAQVKAGDMPFDVVIAAPDAMRVVGTLGQILGPRGLMPNP
KVGTVTPDVATAVKNAKAGQVQFRVDKAGIVHTTIGRRSFADDKLQGNLAALIEALNKAKPATSKGVYLR
KVAVSSTMGVGVRVDTQSIAA
>gi|319761184|ref|YP_004125121.1| ribosomal protein l10 [Alicycliphilus denitrificans BC]
MSLNRSEKEAVINEVTSLAAKAQTLVIAEYRGITVADMTKLRVAARSQGVSLSVLKNTLARRAVAGSAFD
VVADQMTGPLVYGFSEDAVAAAKVVADFAKTNDKLVIRGGAFAGKALDVNGVKQLANIPSKEVLLAQLCG
LLKSPISRTAVVLGALATKKGESEAVAA
>gi|319761185|ref|YP_004125122.1| ribosomal protein l7/l12 [Alicycliphilus denitrificans BC]
MAFDKDAFLTALDSMTVMELNDLVKAIEEKFGVSAAAMAAPAAGGAAGGAAAAAEEKTEFNVVLAEAGAN
KVAVIKAVREITGLGLKEAKDLVDGAPKNVKEGIAKADAEAAVKKLVDAGAKAELK
>gi|319761186|ref|YP_004125123.1| DNA-directed RNA polymerase, beta subunit [Alicycliphilus denitrificans BC]
MAQTSTYSYTERKRIRKSFGSRDSVLKVPYLLQMQRDAYTAFLQAETPPQKRTSEGLQAAFNAAFPIVSH
NGFVEMKFVEYNLAKPAFDVRECQTRGLTFASAVRAKVQLIIYDRESSTAQSKVVKEVKEQEVYMGEVPL
MTDKGSFIINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDILYFRVD
RRRKMPVTILLKAIGLNPESILANFFVNDNFRLMDSGAQMEFVPERLRGEVARFDITDKSGKVVVAKDKR
VTARHTRELEQSGTTHISVPEDFLLGRVVARNIVDPDTGEILAKANEELTEALLKKLRSAGVQELQAIYT
NELDQGAYISQTLRIDETADEFAARVAIYRMMRPGEPPTEDAVQALFQRLFYNPDTYDLSRVGRMKFNAK
VGRSEATGPMVLDNDDILSVVKILVDLRNGKGEVDDIDHLGNRRVRCVGELAENQYRTGLARIEKAVKER
LGQAEQEPLMPHDLINSKPISAALKEFFGASQLSQFMDQTNPLAEITHKRRVSALGPGGLTRERAGFEVR
DVHVTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFIETPYRRVVDGKVTSEIDYLSAIEEGKYIIAQ
ANAALDEEGRLTGDLVSAREQGESTLVSAERVQYMDVSPAQIVSVAASLVPFLEHDDANRALMGANMSRQ
AVPVLRPEKPMVGTGIERVAAVDSGTVVTARRGGVVDYVDATRIVVRVHDAEAVAGEVGVDIYNLIKYQR
SNQNTNIHQRPIVKKGDVLAKGDVIADGASTDLGEIAIGQNMLIAFMPWNGYNFEDSILISERVVAEDRY
TSIHIEELVVMARDTKLGAEEITRDIPNLSEQQLNRLDESGIIYVGAEVQPGDTLVGKVTPKGETTLTPE
EKLLRAIFGEKASDVKDTSLRVDQGSSGTVIDVQVFTREGIQRDKRAQQIIDDELKRFRLDLNDQLRIVE
ADAFDRIEKLLVGKKANGGPHKLAKGATIDKEYLAGVEKFHWFDIRPADEAVAAQLESMKNAMEQTRHSF
DLAFEEKRKKLTQGDELPAGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKITPVEDMPHMADGTPVD
IVLNPLGVPSRMNIGQVLEVHLGWAGKGLGQRIGDMLRDQANVAEMRKFLGEVYNSRGRKEDLSQLSDDE
VMSMAANLTGGVPYASPVFDGASEAEIKDMLKLAYPDDIKERKGLTDTRTQAWLIDGRTGERFERPTTIG
YMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYVLQEMLTVKSDDV
QGRTKVYENIVKGEHAIEAGMPESFNVLVKEIRSLGLDIELERS
>gi|319761187|ref|YP_004125124.1| DNA-directed RNA polymerase, beta' subunit [Alicycliphilus denitrificans BC]
MKSLLDLFKQFTPDEHFDAIKIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYEC
LCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSLPSRLGLVLDMTLRDIERVLY
FEAYVVTDPGMTPLKKFSIMSEDDYDAKRKEYGDEFVAKMGAEGIKELLEGIDIEIEIEKLRGDLTGSEV
KVKKNAKRLKVLEAFKKSGIKPEWMVLEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRL
LELKAPEIIARNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGR
SVITVGPTLKLHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPVM
LNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEARTLMLASNNVLF
PASGEPSIVPSQDVVLGLYHATREKINGKGEGMVFTDIAEVQRALDAGEVELATRISVRLTEWNRNKATG
EFEPETKLVETTVGRALLSEILPKGLAFSNLNKALKKKEISRLINASFRKCGLKETVVFADKLLQNGFRL
ATRAGISICVDDMLVPPQKAEIIGRAEREVKEIEQQYVSGLVTAGERYNKVVDIWGKAGDEVSKVMMQQL
AKQKTTDRHGKEVDQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQ
YFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTEEDCGTSNGSLMRAIVEGGEVIESLRERILG
RVAAEDVLHPETRAVLVPAGRMLDEDLIEEIEAAGVDEVKVRTALTCETRYGLCAKCYGRDLGRGGLINL
GEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGVIGFNATMRYVTNTKGELVVIARSG
EVIIQDEHGRERERHKVPYGATLTVKADQQIKAGTILANWDPLTRPIITEFAGTAKFENVEEGLTVAKQV
DEVTGLSTLVVIDPKRRGSAKVVRPLVKLIDGHGQEVKIPGTDHSVTIGFQVGALIQVRDGQEVGPGEVL
ARIPVEGQKTRDITGGLPRVAELFEARSPKDKGMLAEITGTVSFGKETKGKVRLQITDPDGKVWDELVPK
EKNVLVHEGQVVNKGELIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVVVENPGESSYIAGEQVERSEILNTNEQLQSEGKIPATYTNVLLGITKASLSTDSFISAASFQETTRVL
TEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKVKDAMDEAERRAIAEAEAAELASAGAEGAAAE
IDGSADAAD
>gi|319761188|ref|YP_004125125.1| hypothetical protein Alide_0464 [Alicycliphilus denitrificans BC]
MWTTWILLALLLFWAVGAYNRLIRLRSAAMQAFGALDAHMLRWMALLGEYEASRAAPADSEGAQGAARSA
EQDDAHAALWAAATQLSASLAVARARPLDADAAAALSAAAQVLDTAWQTVVREAAQTSEGVAPPALAPWV
QRREQVALQSDAARRQFNDAVLLYNHAVAQFPASLLAWLFGLKKGRTL
>gi|319761189|ref|YP_004125126.1| sun protein [Alicycliphilus denitrificans BC]
MSAHPHPSPGAASAALSRLLDATASALQAIRAGQSGTAALAATDAALRPAVQALLFQVLRNLGRAQALRR
LLAPRKPPPRVDALLCTALALAWEPESAPYEPFTLVNQAVEAAKRSPARHGSAAFINACLRRFLREREGL
VAATQGDETAVWNHPAWWIQRLRRDHPQCWQQILQANNAPAPMVLRVARQKSTSALYQKALAAINIESTA
VGGWGVVLARPVPVQRLPGFDEGVVSVQDAAAQMAAPLLLDGLDAGKSLRLLDACAAPGGKTAHLLEWAA
ALQAPWQVTALEVDVVRAERIHDNLRRLGLSAQVLVADAGRPEAWWQQASGGEPFDAILLDAPCTASGIV
RRHPDVRWLRRESDVAQLAALQARLLAALWPLLKPGGRMLYCTCSVFRAEGDAQIQAFLAHNTDARLLPS
AGHLFPGSPDKHGALRDNGPGEHDGFFYALLQKAA
>gi|319761190|ref|YP_004125127.1| hypothetical protein Alide_0466 [Alicycliphilus denitrificans BC]
MFACLLALWALPSAVRAQHHGEVADLQLERTAEGLLLSAALQLELPEVVEDALYKGISMHFIAEAEVVRQ
RWYWSDKTVARATRFLRLNYQPLTRRWRLTQSPVPFAANGLGVSLGQNFEELPDALSAMQRIARWKIADE
AQIDEGVPYVVNFQFRLDMSQLPRPLQIGAVGRSGWDIVLARSVRLPAAEAAR
>gi|319761191|ref|YP_004125128.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MSDKGIRPAASARKAASRARAMRWALGLGAGVMSAIGLVLLFLLTQATNNRALYERNFAWLLGVNVLVAL
VLLAVLVWGAVRLAVRLKRGRFGSHLLIKLAGIFGLVGVIPGLLIYVVSYQFVSRSIESWFDVKVEGALS
AGVSLARVTLDTIASDLATKTRSASTQLAQVPDAAAGLVLERMRDQLGATDLVLWNAAGQPVAGVGKSRY
SLNPERPSVQQFRMARQERISFQIEGLDDISDPMAAENARVRTLVLVANPGVGLLAEPRYVQATLPLPQA
LVANAIAVQEANREYQERALARVGLRRMYIGTLTLSLFLAVFGAVLLAVVLGNQLARPLLVLADGVREVA
AGNLGPKAALQGKDELGGLTRSFALMTQQLADARSAVEQSMGELDAARGNLQTILDNLTAGVIVLDRQGV
IRSSNPGATRILRAPLAAYEGKPLVEVPGLADFAATVQRHFDTFALERDHHGLDHWQHPFELHASGGGLA
AQGTSLVVRGAELPNDERLLVFDDISEIVSAQRAQAWGEVARRLAHEIKNPLTPIQLSAERLERKLAGKL
PDAEQAVLTKSVKTIVDQVDAMKRLVNEFRDYARLPAAELHPLDLNALITDVLHLYDPETAQVPVRAELD
ERCPLIRGDAQQLRQVVHNLLQNAQDATQQAAEQQGSAPAAVRIGTRWNDAAQRVRLTISDCGPGFPPHI
LQRAFEPYVTTKPRGTGLGLAVVKKIADEHGARIDLVNRVEGDVVVGAQVSLSFAPETAVAL
>gi|319761192|ref|YP_004125129.1| response regulator receiver [Alicycliphilus denitrificans BC]
MANILVVDDELGIRDLLSEILNDEGHSVDLAENATQARSARLSANYDLVLLDIWMPDTDGVSLLKEWAMA
GALTMPVIMMSGHATIDTAVEATRIGAFSFLEKPITMQKLLKAVEQGLARSTAGQPQAAPAPANAAAVPP
SGMVLGGNGAQSAAHVTPAAESLPLSHQGFNLDRPLREARDGFEKAYFEFHLAREGGSMTRVAEKTGLER
THLYRKLRQLGVDLGRNKRSG
>gi|319761193|ref|YP_004125130.1| hypothetical protein Alide_0469 [Alicycliphilus denitrificans BC]
MVTHDAWALVCRLFAGGTPVLLATLSTREVSALSALGKAVRPKVVDQSFVLCPHCQQHRVQVWSDGRRGR
ICRCPDCGQVPVEASDGAALALDEDWLRQKMRLALDIESRDGIDDLGDGAWRLGDARRSPVVLARDLTRV
LHEPTLLDRVRVAGSNILVITPRPRTTRGSPFGSGVEWLALEERFTFYGGGITFIPSVPSAAPVVADPAA
PVNGPFSADFKWATLPNVQSTPIHFTQGQAKVFEALWSFKGAEVDGERIMQRAGQKSDKPIDLFKIKSRD
KGKPEYEARLAAYVALVVTQQRAGLYSMPCAAAVLA
>gi|319761194|ref|YP_004125131.1| hypothetical protein Alide_0470 [Alicycliphilus denitrificans BC]
MKKTFVDVMLELPVDATLRDFLTTHSLPVPDGFAWDDTPETSQFLVEAVKVWPDIAARDRMTANLMASVQ
LGDAAGKQAMFEAAVTDGAALAGLTLCASDVHRSFWLYVHHPALFERAYDFSFWEQHGQQTQQYDLGLKR
QPNGSDANLTALRHAISAFYKRELQCGDGSVAHLVERSPGVFLLSVHVKDMAMLRLEFEGATLKRRVGNP
NIHMVLEYAKSTGVVRTLVRGGAKYQQMLVEAFAEHVLGVKASAHKIKSPTLDLSMLRTGFDVPEVFEDG
FSMVQLKALTLLSPDTALKIECTAMQSSQQRSVHDLLKEKLPGPLEGQWAVTAAQVNLYYPPEPGRTRPK
VVTIEVTSKGRLNLHKFDANMQAQLEGYLVAVGILQKGQTLSAQELPPETDAVSSSSAFED
>gi|319761195|ref|YP_004125132.1| helix-turn-helix domain protein [Alicycliphilus denitrificans BC]
MASAFGARLRRLREAKKLTLQQVADEVGCTKAYIWELEMKDGQRPSAERVQALARVLGVTMEDIMGEPIE
QVPQASPEDVAFFREYAGMTDEEKDRYRQALKIMFPDKS
>gi|319761196|ref|YP_004125133.1| hypothetical protein Alide_0472 [Alicycliphilus denitrificans BC]
MSASQPITGSIAASTVLKWLRAWHADGMPDAVDLEVVRQMLPETPYGKGVREIKAPMVLDINSCEGMLVR
SPQDTAEWGIFYNGKANPERQRFTIAHELGHFILHRDQRQSFNCDKESVYSGADTIRVIEREADDFASNL
LMPGDLLREWISNQRIDLHVLSALAKRFQVSFEALCIRFIKFTTQRAILVYWDNGFVKYEWRSSSAVKTR
ARIRRTDDPQEPLPGTLAADSTVEQEWDGTEMSAAIWCPEEAPHMKLREFKHSYTTGDRVLTLLLLESAE
PRSWDRSWQDGESFDSFDQFVSNGQLPVR
>gi|319761197|ref|YP_004125134.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MIDVATLSVIRRWALREQLSIREIARRTGLSRNTIRKYLRAGEAEPHYAKRVSPSKLDPFALKLSGWLKT
EAGRSRKQRRTVKQIYADLQALGYTGSYNRVAAFVRLWQEQRLVAQQTTGRGTFVPLAFGPGEAFQFDWS
EDWAVLAGVRTKLQVAHFKLSHSRAFYLRAYLLQTHEMLFDAHNHAFVVLGGVPRRGIYDNMRTAIDRVR
RGKERDVNARFAAMVSHFLFEAEFCNPASGWEKGQVEKNVRDARHRLWQVVPPFPSLPDLNAWLEERCVA
LWHEIEHGKLAGTVADVWAEERAALMPVPRPFDGFVEHTKRVSPTCLVHFERNRYSVPAPYANRPVSLRV
YADRLVVAAEGQIICEHQRLIERNHHGAGQTVYDWRHYLAVLQRKPGALRNGAPFQELPVAFKRLQTALL
MQPGGDREMVEVLALVLHHDEQAVLAAVELALESGAASKTHILNVLHRLLDGKPAPAPVTSPQALKLAME
PQANVLRYDQLREVRYAS
>gi|319761198|ref|YP_004125135.1| istb domain protein ATP-binding protein [Alicycliphilus denitrificans BC]
MRHDPAIASIVIMLRELKMHGMAQAVAELAEQGAPAFEAAQPILSQLLKAETAEREVRSVAYQLKVARFP
AYRDLAGFDFSHSEVNEALVRQLHRCEFLEDANNVVLVGGPGTGKTHIATALGVQAIEHHHRRVRFFSTV
ELVNALEEEKAQGKTGQMAHRLAYVDLVILDELGYLPFSASGGALLFHLLSKLYERTSVVITTNLSFSEW
ASVFGDAKMTTALLDRLTHHCHILETGNDSYRFKNSSAQQPPQTTKKEKATKNLSTT
>gi|319761199|ref|YP_004125136.1| hypothetical protein Alide_0475 [Alicycliphilus denitrificans BC]
MRWKWWVSFAWKSTALAVEGAGVILVREETGVAQIEGLSAWSEVLGRPLILLSADKDNGYRSRFDLAHEI
GHLVLHRHIQRTTDSARHKLMEQQAHRFAGAFLLPAETFASEVRVPPTLDDLLLLKRRWGVSAAAIIMRL
KALEMLDEDGALMLFKRRSARWGAKSEPGDEDRRPEQPRLLRRTIDLLVEEKVMPLDAIPRHIGLAAGDV
ESLAGLPEGYFQGKTNVVEFARLKATQKHVDDQPAQGNKVVPFRPVSKS
>gi|319761200|ref|YP_004125137.1| hypothetical protein Alide_0476 [Alicycliphilus denitrificans BC]
MSKNTKQTSPRIGRLASETLQSSNSSQVAKSLAASALSQRSGDKQTGAKMEDKAARVLASDRYAKETKEL
AASVLSQANKQR
>gi|319761201|ref|YP_004125138.1| hypothetical protein Alide_0477 [Alicycliphilus denitrificans BC]
MSQDLSDSQLKDLWRQGKIPVIFKRNKPLPVLARIPFAEGNMEWLRDGRRLKPDWCAQFKAWEIPTAWFD
SVIKLALRRHQEVYVIQLYREHQKCAPACWNAEGFHCECSCMGENHGGGHPGGNWYEVSETFAVSWGQQR
YSCRHLRVTVPSR
>gi|319761202|ref|YP_004125139.1| cmp/dcmp deaminase zinc-binding protein [Alicycliphilus denitrificans BC]
MSVAAKMIKSKDAATPLAAHTKSVDSTFEATASLTPELVVALCGPIGSPLHETATQIKNALNEFGYRTEP
IRLSELIRINTDFVGIPIDKSNRYSEIDTLIKAGDELRRQLGNDVLAKMAIAKIGADRRKSYGEFSDRAN
EGEKSSESRIRTHRICHVIDSVKNVDELKLLRLIYGEALIAVGVFSPVEIRKKNLERPGALSSEDIAKLI
DTDSGEEFSHGQSVRDTFPQCDFFLRVDEPITGPTEHKAVGQLVEKLRRFFNLIFRTAVVSPTPEENAMY
AAASAARNSACMSRQVGAAVTSKGGELLATGWNDVPSGGGGLYGKPPLFQISTEERGDERCYAQSGAKCH
NDIEKRTIADKIIEALVNDSVLTAENQEKAVQVIMKDSRVKDLIEFSRAVHAEMHAILGASRVAGDRVIA
GKVFVTTYPCHSCARHLVAAGISEIYYIEPYRKSLATRLHSDALTEAIDGRGVKLMQFDGVAPRRFIDLF
DSGSRKSKAGVLDLKRRDEASPSTHVSLRAIPRLEEVVVAEISSTQLRLPELTTREGTDDQSTPTAA
>gi|319761203|ref|YP_004125140.1| nucleotide sugar dehydrogenase [Alicycliphilus denitrificans BC]
MKVTIFGTGYVGLVQGAVLADVGHDVMCVDVDATKVAALQAGRIPIHEPGLQPMVQANQAAGRLHFTTNA
AEGVAHGDLIFLAVGTPPDEDGSADLQHVLAVARTIARHMAGPKTIVNKSTVPVGTADKVAATVRSALAE
RGAAIAFEVVSNPEFLKEGAAVADCKRPDRIVIGTASATAERQLRELYSPFNRNHDRMVVMDVRSAELTK
YAANAMLATKISFINEIANLAERLGADIESVRRGIGSDPRIGYSFIYPGAGYGGSCFPKDVKALIRTAQS
TGFTPEVLLAVDKRNDAQREVLGKRIVAHYGGSLRGKTIAVWGLAFKPETDDMREAPSRNLLQALWAAGA
QVRAHDPAAMDEARRIFGERADLALCASPAETLQGADCLAIVTEWKIFRVPDFEQLARLLKDRMIFDGRN
LYEPEIVARHGLDYYSIGRPTAAVAA
>gi|319761204|ref|YP_004125141.1| nad-dependent epimerase/dehydratase [Alicycliphilus denitrificans BC]
MSVTLVTGCAGFIGMHCAQRLLERGERVVGIDNLNAYYDVGLKHARLDRLRGQGDFTFEQIDVADRDAMH
ALFARVRPHRVLHLAAQAGVRYSIDQPDDYTDSNLLGFGNILQGCRAQQVEHLVFASSSSVYGGNAKLPF
SERDAVDHPVSYYAATKKANEVMAHAYAHLYGIPTTGLRFFTVYGPWGRPDMALFKFTRAMLAGEAIDVY
GQGRLVRDFTYIDDIVEGVLRVLDKPATPDAGHDPLAPNPGTSTAPYRIFNIGNSTPTLLMDYITALEAA
LGTTAIKRMLPIQPGDMHSTAADTAALAAWVGFTPATPVREGVARFVHWYRGFYES
>gi|319761205|ref|YP_004125142.1| glycosyltransferase [Alicycliphilus denitrificans BC]
MTASTAPRALSSRLPWTHPLFWFAAISLAHVAMRLLASPALKWDEAEQILWTQELALGYGPQPPLYTWLQ
WAMNQVFGPSVLALSLLKHGLLALTYSLMYLAGRELLDERGAFWASASMVLMPALGWYSVRDQTHTILVT
AMACGAWWLLLRIVRRPRPLDFALLGLVCGFGMLAKYSFALVAGAMLLAALSVPEARRALLSRGWWWAPL
VGLLVVLPHAAWLLSHLTEATSGTISKMNIQPENGLVKGLLRLLEGVVPSTLLLWALFALWAFRSAWWQR
PLAPVSPPMHRVFVRYLGLVLLALAGMVVFAGVSNFKGRWILPLLCMAPLAAFSARPELQHHPRARRYTI
AVATMAVILLVAAGIRPWFSGLRGEVDELNHPAIELADALRAAGYDGTSPIVASDHMLAGMLRVRFPDAL
VDACAPGEDEIPTCVADHLRRSVQRGQGLLLISRTDYVPSSWWDQAQARIAPRALQSIHLPFHMVRAGTP
QAHYEYIWSPRGTQP
>gi|319761206|ref|YP_004125143.1| glycosyl transferase family 2 [Alicycliphilus denitrificans BC]
MNTAPTPTPDVSIVVPIYNEVENLPDLVERIAQAMSAQPLSFELLAVDDGSRDGSADTLRELAATRPWLR
PVFLARNYGQSSALQAGFDRVRGRYVVTLDADLQNEPGDIPLLLGRLETDSSVDMVSGWRKDRQDAELSR
KLPSRIANRLISSATGVHLHDYGCALKAYRRPIIDRIRLYGELHRFIPSLAKEAGARITEVPVRHHARTR
GVSKYGIDRTFRVILDLILIVFFMRYRQRPLHAFGGLGLWLAAPGVLILAWLLLQKVLGEDIGGRPLLLA
GVMLVLMGVQMVVAGLIGELLMRIYHEAGGAPQFHAQEYVPDSRVNMPAARDQQAQAATNNIA
>gi|319761207|ref|YP_004125144.1| hypothetical protein Alide_0485 [Alicycliphilus denitrificans BC]
MKRPFKALLRGLVGLALLGAVVALADPARVWGQLRQAQPGWLLAGLLAGIASNLVSALRWRALARWLGAN
ASTRDACRWYFQAIGLNALLPGAVVGGDVYRAVVLRGAGQDTAASSWSVVLDRLSGLWMLCAIGGLGAAA
CADVLAPWLRLPRGLFIALMLGGTLLWLALPWCLPALLRSRRFAGGWLAPLREAATRPDFPRQLVWQAGA
SAAVQLLSAAALAGGGLALGVALPASVWAWAIAPVFLMAALPVSVGGWGTREAAAVAALAPFGVAASAAV
GVGVVYGVYGLAQGALGALAFGLPRSAGR
>gi|319761208|ref|YP_004125145.1| uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase [Alicycliphilus denitrificans BC]
MSAARDAAAAQHYPQGALYVVATPIGNLADITLRALHVLQLADTLACEDTRHTQSLLRAYGIDKPSDRLL
ALHQHNEAQAAQMVVQQLQAGQRVAYVSDAGTPGVSDPGARLVAAVQAAGLRCIPLPGASSVTSALSVAG
AVAPTADSGGFLFAGFLPPKGAERTAAVQRLAAEPRCVVLLEAPHRIAALADTLADLGERPVTLARELTK
QFEEVSTHPARKLAAWLAGAPQRVKGEFVVLLHPLAATQGDGAEAERVLRLLLDELPTKTAVKLAADIAH
ASRNTLYERALQIKRDAEPAGEHG
>gi|319761209|ref|YP_004125146.1| uncharacterized protein family upf0102 [Alicycliphilus denitrificans BC]
MGFLGKKVNGSAPARTTRAAGQAGEDRALAHLTAAGLALVERNYRTPGRGGGEIDLVMRERDGTLVFVEV
RSRGAAGFGGAAASIGAAKRRRIVLAAQHYLLRWPAQPPCRFDAVLIDGGQVQWLRAAFDAQ
>gi|319761210|ref|YP_004125147.1| phosphoheptose isomerase [Alicycliphilus denitrificans BC]
MLEQRIQQHFIDGADLKYQAAQALSQPIGAAVQAVLACVTNGAKVLACGSGPSAAQAQQFAAFCVMGFER
ERPELAALALVSDAVWAAASAAGAGADIAALARQVRALGQAGDLLLAITTGGSEPALLEAVQAAHERDMT
VVALCGRDGGALATLLRETDVQICVPHDRAARVREVHALVLHCLCDGVDAQLLGEQEILS
>gi|319761211|ref|YP_004125148.1| transport-associated protein [Alicycliphilus denitrificans BC]
MKVPMLRTFGSLLAAATLVGSLAACAPLVIGGGAVMGAMVAVDRRTTGTQVEDEGIEMRTASRIREALSE
NAHVNVTSYNRQVLLTGEVPSAADSQKAEQIALAVENVRSVVNDLGVMPSSSLSQRSKDTFITGKVRASL
VDAKDLSANAFKVVTERNVVYLMGRVTPREAKRSAEIARGVDGVSKVVRVFEVISEEELSRMAAKPAPVS
QDPAAAGQPAK
>gi|319761212|ref|YP_004125149.1| 2-hydroxy-3-oxopropionate reductase [Alicycliphilus denitrificans BC]
MTMNSINPRVYEPAPARRVAFLGLGVMGYPMAGHLARAGHEVTVYNRTATKSEAWCAEFTGAGGTKHAKT
PREAAQGAEIIFCCVGNDDDLRSVTLGADGAFAGMQPGAIFVDHTTASAEVARELYGAARTLGLQFVDAP
ISGGQAGAQNGQLTVMCGGDQAAFDAVRPTGMAFARAFTRIGDSGAGQLAKMVNQVCIAGLVQGLSEAIA
FGMHAGLDMPLVLDVIGKGAAQSWQMDNRGKTMALGRFDFGFAVDWMRKDLGLVLDEAKRNGARLPVTAL
VDQFYGDVQRAGGQRWDTSSLITRLLPAKP
>gi|319761213|ref|YP_004125150.1| twitching motility protein [Alicycliphilus denitrificans BC]
MERDQASKFINDLLKLMVSRGGSDLFITADFPPAIKVDGKVTKVSPQPLTPVHTLTLARSIMSDKQVADF
ERTKECNFAIAPAGIGRFRANAFIQQGRVGMVLRTIPLTLPTIDGLGVPQVLKEIAMTKRGLCILVGATG
SGKSTTLAAMVDWRNENSFGHIVTVEDPIEFVHPHKNCVVTQREVGLDTDSWEAALKNSLRQAPDVILMG
EIRDRETMEHAVAFAETGHLCLATLHANSANQALDRIVNFFPEERRAQLLMDLSLNLKAMVSQRLVPKQD
GKGRAAAVEVMLNTPLIADLIFKGEVAEIKEIMKKSRNLGMQTFDQSLFDLFEANVIGYEDALRNADSIN
DLRLQIKLSSQRAKTTDLASGTEHFAIV
>gi|319761214|ref|YP_004125151.1| cyclic nucleotide-binding protein [Alicycliphilus denitrificans BC]
MKGILGLLKSRPQKTGEDSSDSVLFTTAFASQGVDESLLIPWEARAVEVGAKRLPKSRGGKLLQSLWSKD
KYMAHLDQSAVERMERFFEFAAIPPNRDVIRQDEYGNFMVVLLTGTIAVDRVQPWGEQLRLAETRPGEIL
GEMSLLDSGIRFSACTTLTDCEVAVLSADAMDEMMSQDPQLAASLVALLARKLSLRLRAVSARLSENQR
>gi|319761215|ref|YP_004125152.1| twitching motility protein [Alicycliphilus denitrificans BC]
MDITQLLAFSVKNKASDLHLSAGLPPMIRVHGDVRRINVDALDHKTVHAMVYDIMSDAQRKVYEEFLEVD
FSFEIEGLARFRVNAFNQNRGAAAVFRTIPSKILTLEQLNAPKIFADLALKPRGLVLVTGPTGSGKSTTL
AGMINHLNETEYGHILTIEDPIEFVHESKKCLVNQREVGPMTLSFSAALRSALREDPDAILVGEMRDLET
IRLAMTAAETGHLVFGTLHTSSAAKTIDRIIDVFPAEEKEMVRAMLSESLQAVISQTLCKLKDGSGRVAA
HEIMTGTSAIRNLIREAKVAQMYSTIQTSNSVGMQTLDQNLTDLVRRNIISPAEARSKAKIPENFPG
>gi|319761216|ref|YP_004125153.1| alanine racemase domain protein [Alicycliphilus denitrificans BC]
MTTIDRNLQRVHERIAQACAAAGRPPGSVALLAVSKTFGAESVHAAALAGQRAFGENYIQEAVEKMAALR
ALAPALALQWHCIGPIQSNKTRLVAEHFDWAQTVDRLKIAQRLSEQRPAHLPPLMVCIQVNVDGGATKSG
VGPHDAAALAEAVARLPRLVLRGVMSIPDDAPTFEAQRALHERAAAVFHHIKAQGFEGLGQFDTLSMGMT
GDLEAAVAAGSTMVRVGSGVFGARQYAARC
>gi|319761217|ref|YP_004125154.1| aminotransferase class v [Alicycliphilus denitrificans BC]
MPGLLPDVDPDGLLEFSVVYTDRALNHMSRRFTGVMQDILAALKEVYHAHTAVLVPGSGTFGMEAVARQF
ANDAKVLIVRNGWFSYRWSQIFDAGGLRGGAVVCKARRQGEGPQAPWAPCPANEVAAAIRAEKPRVVFAP
HVETASGIILPDDYIRTVSDAAHEVGALFVLDCVASGAMWVDMDKTGVDVLISAPQKGWSGSPCCAMVML
SARAREAIEATQSSSFSCDLKKWMQIAEGYEKGQHAYHTTMPTDALVRLRDVMLETRAYGFEKVRQEQVA
LGAKVRALLESRGFPSVAAEGFKAPGVVVSYTTDPGIQSGKKFIDVGLQTASGVPLQCDEGPDFTTFRVG
LFGLEKWHNVDRTVGHLAAALDKILG
>gi|319761218|ref|YP_004125155.1| hypothetical protein Alide_0496 [Alicycliphilus denitrificans BC]
MQDAKAQFAQRLRDAMAAAGYEPKPAVLEREFNTRHWGKPMTLHGVRRWLLGETMPDHRKLATLADWLGV
PVQELGYGDEGGHRVREHQPQWHSGLGYQDKELFDIYLRLPVPKRRLARDVILAIARAHAAEEAERTGKD
>gi|319761219|ref|YP_004125156.1| hypothetical protein Alide_0497 [Alicycliphilus denitrificans BC]
MHSFPGLHEVADHAGPRRLALALLVLFAAIFAACNLAPRSLWVDGLKAVAEAAMVGALADWFAVAALFRR
IPLPLVGRHTDIVARNKDRIGGNLALFVRDRFLDAPSLVAMIRRHDPAGMLAQWLTAPANAGLLGRQVSR
LALMALDTVEDEKIQAFLAQAARALLGRLDLSRSMASALAALTHQGRHQELLDALLERMGGMVRTEEARA
FVADTLVQWIKREHPLKQKVLPTDWLSGKGAAAITHAVDTLLKAVADDPRHELREVLDGALARLAERLQN
DPDWARRGEELRAWLQNDEALGRYVRDLWAGLRRSLREDLAREDSELSRRVAEMGQWLGMSLAGDAALRV
RLNVRLELWAATFAPDVAQSVAEHIRTTVQRWDAQEMAHLVEQHIGRDLQYIRINGTLVGGLIGLVLFTI
SHAGALWALLDGG
>gi|319761220|ref|YP_004125157.1| fad linked oxidase domain protein [Alicycliphilus denitrificans BC]
MTSSPAPTQSERAARQREIVQALSACVPQHALLWQSEDTTPYECDGLTAYRQRPLVVCLPETEDEVRAVL
KTCHALQVPVVARGAGTGLSGGAMPHAMGVTLSLAKFNRILDVDPVSRTARVQCGVRNLAISEAAAPYGL
YYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVLRVRGFTMEGEPVTFGSEALDAPGYDLLAAVIG
SEGMLAVALEATVRLIPSPQLARCIMASFDDVRKAGDAVAAVIAAGIIPAGLEMMDKPMTAAVEDFVKAG
YDLTAEAILLCESDGTPEEVEEEIARMSEVLRGAGATAISVSADEQERMRFWSGRKNAFPASGRISPDYM
CMDSTIPRKRLADILLAIQQMEKKYGLRCCNVFHAGDGNLHPLILFDANDPDQLHRCELFGADILETSVA
MGGTVTGEHGVGVEKLNSMCTQFTVEENAQMMGLKHAFDPAGLLNPGKVIPTLNRCAEYGKMLVRGGRLS
HPGLPRF
>gi|319761221|ref|YP_004125158.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MAAAPFSASAARRIPPIQCLLTFEALARLRSVTQTADELCVTPSAVSHRVKQLEQILGTRLFGRSDFSLT
TEGSSYLAQVREGLSALQRLPGHAVSPGRRRLKLAVTPTFARVILIPRLRQFTETYPEIDLALHVSIPLL
DVVAEDADLVVRYGPGHYADMEHVEIARDVLTPLASPGFVREHGPFERPEDLEGLPLLRSPLEPWRTWFA
AAGLAWTEPNEGSQFNDVGLMCDAAAAGMGVAPVRLKLAAPWLEQGTLVRLFDIDAPSPYAHYLCWRAGT
MERWECAAFADWLRRSMA
>gi|319761222|ref|YP_004125159.1| formyltetrahydrofolate deformylase [Alicycliphilus denitrificans BC]
MTPAYILTLSCPDRLGLVHAVSGFLLEHGGNIEEAAQYNDDATGLFFMRVQFACSQHDGATLKEHLARFA
EPYAMRWSLHAKAEAMRTVLLVSREGHCLNDLLFRVKSGLLPIDVRAIISNHRDFYQLAASYNIPFHHIP
VTAATKAQAEARQYEIIESEGAELVVLARYMQVLSNELCARLAGRAINIHHSFLPSFKGAKPYYQAHDRG
VKLIGATAHYVTADLDEGPIIEQDVARADHTDTVEDLTARGRDTESQVLARAVKWHSEHRVLLNGHKTVV
FR
>gi|319761223|ref|YP_004125160.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MGSNAPGAVPRIAPWWGMALYLLAGAVWVAVGDGLLAHWVQDPHLLARWQTFKGWLYVAFTGVLAWWLLT
RMRSAERARSALAQERVQIERHAPVGIARVEPAGMRFLSANERLCAWLELPPQAIAQRHFDELVAPDDRA
SAQRQLQQLLSGQAGHFQGERLCLRAGGGPPLPVLCTVSLVPAAQDEPAHLLCVLQDMGEINAARAALAR
SENILRLALDGSGSGMWDWDLAQRRITGSQGLLRLLRYLGPELPRGLNLLRLVHPEDRHRLHRAVQRAIA
AGVSFDEAARLQRFDGSYCWFQARGQCHRDAQGRPERFSGILTDLTDLRTAEERQRLASTVLDNAVEGVV
VADAHARILSINPVVTRVLGYTEEELLGRNPRVFQSGRHDKAFYETMWEAVRRTGHWQGEIWNRRKNGEI
FPERMSLSAVRDAQGAVTHYVCMFSDISQEKAQHQRLECLSQCDSLTGLPNRAWFVEQLGQALCQAQVHG
EQMAVLLLNLDRFKDVNDSYGHAVGDEVLRHITAQVCMSLRPGDLVGRMAGDEIAVLARNLRHSDGAAAV
AQHMIAAASKPWRTPDGIEVVAGVSVGISMFPEHARTAEQLLQGAHSAVYGAKARGRGAHCFFDESMIQA
ARERLEIEARLRSALAQGHLRLYYQPQVDIAMGRIVGAEALLRWLDPEEGVISPARFISVAETSGVIGPL
GRWVMQEACSQGQRWRAAGLPGIRLAVNVSPYQFQLTDVAACAAQALEDSGLPPHCLELELTESALAERP
EAMRQVLQRLQALGVRIAVDDFGTGYSSLAHLKRFPIDALKIDQGFIRDIPSSADDMAISATIIAMGRSL
GLTVLAEGVETPEQLAFLRARGCDSYQGYLCSRPVPAEQFGALLQAQA
>gi|319761224|ref|YP_004125161.1| hypothetical protein Alide_0502 [Alicycliphilus denitrificans BC]
MRPIIPRLPRPGSLLPPLLLALLMLPGCAALPSAQPPLDAAWQAQLERWPAVDALLLGEQHDAAAHQRWQ
QGTVRWLAERGRLAALVIEMADAGQGTDGLPPDAGAAQVRAALRWNEDAWPWQRYAPVVMAAVAAGVPVR
GGNLPRSRMRAAMQDAALDAHLPPAALALQREAIAEGHCGLLPPDRLMPMVRVQLARDASMARAVLDARQ
SGRTVLLVAGFGHVRRDLGVPTWLPAWFTSKTAIAQAGQAPSAIESEANYIHATPALAPQDYCAPLRGPG
TATPVR
>gi|319761225|ref|YP_004125162.1| ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [Alicycliphilus denitrificans BC]
MQRETTDLAPSLSTQPISMDVLKEKYFKDGESDVEDLFRRVARALASVEREDIREAMQARFLDNLRAGAI
GAGRIMSAAGTDIQATLINCFVQPVGDCIQGVDDAGYPGIYEALREAAETMRRGGGVGYDFSRIRPRGAM
VKGTASMASGPCSYINVFDQSCSTVESAGARRGAQMGVLRIDHPDVLDFITAKRTPGRWNNFNVSVGVPD
AFMQAVEQDREWELVHSAAPGAELLKEGARQRADGQWIYRTVRARELWDTIMKSAYDFAEPGILFLDQIN
TDNNLHYTETIQATNPCGEQPLPPYGCCDLGPIILTRFVRNPFGLHGEASFDFDAFEQAVATQVRALDNV
LDVTFWPLPQQQAEAAAKRRIGVGFTGMGNTLAMLCKRYDRQDGRDMAVKIAERMRNAAYRASVELAKEK
GAFPKFQADGYLAKGTFASRLPEDIQKQIRKHGIRNSHLLSIAPTGTVSLAFADNASNGIEPPFSWTYTR
RKREADGSKSEYVVEDYAWRLYKTLGGDVNQLPAYFVSAMDMAAADHVAMMEAVQPYVDTAISKTVNVPE
DYPYADFKGLYMQAWHSRLKGLATYRPNSILGAVLEVPAAEAKPAKGEPAPEPAQPVDPMRIVIESRPKG
GLSAVAEKIEYWTQEGQKRLYLIVSFLPVPDGRGGTVDRAIEFFMPVGQSSESQQWITSSMRLLSLAARG
GFLERALSDMRKVAWDRGPVRLGTYQRADGAQVPLWHDSEVAAVAYAVQNILARRADAPQQQVLPLDEPD
MPAGMPPAMAGKKCQECGAHAVIRKDGCDYCTQCGALGSCG
>gi|319761226|ref|YP_004125163.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MRKKPTLSTKLLAMGTVFLLVALASIGFTLWVTWQLEGGAAAVNEAGRLRMNMLRMILAQQNESPQEFAR
LKQRFNDGLELLRTGDPARPLFVPWNDETRTQYEHIRSQWLLLQQEWKMSLPQESGAAAVARGDAFVSEI
DGFVQAIEVRIMRWTAVLHLFHLFLVALAIGSAVAFMALSYLLVLNPVTRLQQALGRVRQGDLGTRLEVE
TEDEFGQLAAGFNLMAHALQASHEGLERKVREKTATIEVRNQRLSALYAVSALAGEAGSLEALAQGFVQQ
IRSVAGSDAAALRWSDEANQRYVLLAADGLPKSLAEEEHCLNTGTCECGQAQERARMRVIPIVPAGRLQL
PHCREAGYETVVSIPVWLHQRLLGEVTLFFRTTLDLSEDMRELLSTMARHLASSMEGLRATALEREAAVA
EERSLIARELHDSIAQSLAFLKIQTQLLRDAVAKGNTEARDRSMAELDVGVRECYADVRELLVHFRTRTQ
DEDIEEALRATLSKFEHQTGVAAALSMSGQGLPLAPDVQIQVLHIVQEALSNVRKHAGARHVQLRVQRHP
WRFEVQDDGGGFDPQAVPPDSLHVGLGIMRERAQRIGASLRLESRAGGGGTCVTLELPTAGVDERLPAAT
TTPFIAAA
>gi|319761227|ref|YP_004125164.1| response regulator receiver [Alicycliphilus denitrificans BC]
MTVTPITLFLIDDHTLLRRGLVALLSQYGDLRVVGEAGDAAEALRLLPQLRPDVILLDNHLPGVRGVDAI
AGLREASQGSRVIMLTVSEDGEDLGAALRHGAQGYLLKTIDGDLLAQAIRRAARGEPVVSPEMMGKLVAA
FQSQGAPEPDPGPMPPDDPAPQLSPREQEVLREIARGASNKEIARQLSIAETTVKIHVQHILRKLGLTSR
VQAAVYASDRQRAE
>gi|319761228|ref|YP_004125165.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MASASHPAAQDPRRNRQAWSVLIVSTLAFTVCFMVWMMFGVIGIPIKKMLNLNSTQFGLLTAMPVLTGSL
VRVPLGIWTDRYGGRIVMALLMAATVPAIWFMGSATEYWHFLVIGLFVGLAGGSFSVGTPYVARWFPRQR
QGMAMGVYGAGNSGAAVNKFVAPVILVAFGWAAVPHVYAAIMLGTLVLFWLFSYSDPAHLVPSHVKFSDQ
LKALKDPKVLKYCQYYSIVFGGYVALSLWMVQYYVGEYGLDIRVAALLAACFSLPGGVLRAIGGVLSDKY
GAHSVTWWVMWVCWICLFLLSYPQTDFTIVTVDGPKTFHIGLNVYVFTVLMFALGIAMAFGKASVFKYIS
DDYPGNIGTISGIVGLAGGMGGFILPIMFGVLMDWTGIRSSAFMLMYGVVWVSLIWMYFTEVRRTDLMAS
QGTSGTAPASR
>gi|319761229|ref|YP_004125166.1| nitrite transporter [Alicycliphilus denitrificans BC]
MSANSATQRDSRAGRLLTLWTPEDKQFWEREGEAVAKLNLWISVPALFLAFAIWQVWSVVAVNLPALGFK
YSTNQLFWLAAAPALSGATLRIFYSFMVPVFGGRRWTALSTASLLIPAIGIGYAVQDNTTGYPTMLVLAL
LCGLGGGNFSSSMANISFFFPKERKGSALGVNAGLGNLGVSVVQFLSPLVITAGVFGVFGGDSQTIVKNG
EHVQVWAQNAAFIWVPWIAIASVAAWFGMHDIADAKASFAAQAAIFRAKHNWIMCWLYLGTFGSFIGFAA
GFPLLIKSQFPDVNPLAYAWLGPLLGALIRPFGGWLSDKVGGGVVTFWNFIVMALAVLGVLFFLPKGMSA
YAFPFGPAQGSFTGFFLMFLVLFCTTGIGNGSTFRMIPVIFLNQKLRLLRGNDEAAQAQAIKDGNTEGAA
AVGFAGALGAYGGFFIPKSYGSSIAATGGPEFALWMFAVFYVACIVITWWYYSRKNAEMPC
>gi|319761230|ref|YP_004125167.1| nitrate reductase, alpha subunit [Alicycliphilus denitrificans BC]
MSHFLDRLSYFAQPRETFSQGHGQTNGEDRTWEDAYRDRWAHDKVVRSTHGVNCTGSCSWKIYVKGGIVT
WETQQTDYPRTRPDLPNHEPRGCARGASYSWYLYSANRVKYPMVRGRLLKHWRAALAVAKSPVDAWAAIV
QNDEARREWQKQRGLGGFVRSTWDEVNQMIAAANVYTIKQYGPDRIIGFSPIPAMSMISYAAGSRYLNLI
GGVPMSFYDWYCDLPPSSPQVWGEQTDVPESADWYNSNFIIAWGSNVPQTRTPDAHFFTEVRYKGAKIVS
VTPDYSEVAKLADLWMHPKQGTDAAVAMAMGHVILKEFYFDKRSAYFDDYARRYTDLPLLVVLKEKQLPD
GRTAMVPDRYVRASDFGDKLGQSNHPDWKTVAYDVDGKVALPNGSIGFRWGKEGRPDQGLWNLEAKEAQG
GNDVKLKLSVLEDGAQAHEVVDVAFPYFGGIESPNFKANDQGGDVIVRRVPITHLELSGEGVAGRVAVAT
VFDLQVANYGVLRGLAGEERDDGYDANAPYTPAWQESITGVPRDQVIAVARQFADNADKTHGRSMVIIGA
AMNHWYHCDMNYRGIINMLMMCGCIGQSGGGWSHYVGQEKLRPQTGWTALAFALDWIRPPRQQNSTSFFY
AHTDQWRYEKLGVEEVLSPLADKSGYQGSMIDFNVRSERMGWLPSAPQLQLNPLQVVKDAQAKGVDPKDY
VVQSLKDGSLTLSCEDPDNPLNWPRNMFVWRSNILGSSGKGHEYFLKHLLGTTHGVQGKDLGPQEAKPQE
VKWHANAPEGKLDLLVTLDFRMSTTCLYSDIVLPTATWYEKNDLNTSDMHPFIHPLSAAVDPAWQARSDW
EIYKGFAKAFSEVCEGHLGVEKEVVLTPIMHDTPAELAQPYGVKDWKNGEIDLIPGVTAPQITVVERDYP
NTYQRFTALGPLMDRIGNGGKGISWNTETEVAQLGDLNGRVREEGATQGRPRIVSDIDATEVVMMLAPET
NGHVACKAWEALSKQTGRDHVHLALHREDEKIRFRDIQAQPRKIISSPTWSGLESEKVSYNAGYTNVHEL
IPWRTLTGRQQFYQDHPWMRDFGEGFVSYRPPVHLKTLHEVEGKKPNGNPEIALNFITPHQKWGIHSTYS
DNLHMLTLNRGGPVIWLSEDDARRGGIVDNDWVELFNANGAIAARAVVSQRVNPGMVLMYHAQEKIINTP
GSEITGTRGGIHNSVTRIVLKPTHMIGGYAQYSYGFNYYGTIGTNRDEFVLVRKMRRVDWMDEEAGQSTA
SAHA
>gi|319761231|ref|YP_004125168.1| nitrate reductase, beta subunit [Alicycliphilus denitrificans BC]
MKIRAQIGMVLNLDKCIGCHTCSVTCKNVWTSRPGMEYAWFNNVESKPGIGYPKEWENQDKWNGGWTRLA
DGSIVPRQGGKWKLLMRIFANPNLPQIDDYYEPFTFDYDHLQSAPESKAAPTARPRSLITGQRMEKIEWG
PNWEEILGGEFAKRSADVNFEQVQKDMYGQFENTFMMYLPRLCEHCLNPACVASCPSGSIYKREEDGIVL
IDQDKCRGWRMCVSGCPYKKIYYNWQTGKAEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDADRIQ
EAASVERDRDLYEAQLGIFLDPNDPEVIRQAKLDGIADNWLEAARNSPVYKMAVDWKVALPLHPEYRTLP
MVWYVPPLSPITSAANAGHVGVNGEIPDVSQLRIPVQYLANMLTAGDTGPVVRALERMLAMRAYQRGLHV
DKVQNMAVLQQAGLTVHDVQDMYQVMAIANYEDRFVIPSTHREYAENAFDVRGGCGFSFGNGCSDGASDV
SIFGGKKPRTIPIKAVV
>gi|319761232|ref|YP_004125169.1| nitrate reductase molybdenum cofactor assembly chaperone [Alicycliphilus denitrificans BC]
MFKKTPESMRLTLRALARLVAYPDAGLRAQMPTLVDALQSEQVLPAARMAELQALVQQICAMDPYEAEER
YVDTFDRGRQTSLHLFEHIHGDSRERGPALIDLTQTYEKAGLYLDAQELPDHLGVVLEFASTQPAQVARE
FLAEMAHILNALFTALQAKGSPYASVVAAVLEAAGEKAQAVAIAPEPGLDEAWAEPEAFDGCATRGQNRP
GQPQPLHFVRNARSNPSSQGVSP
>gi|319761233|ref|YP_004125170.1| respiratory nitrate reductase, gamma subunit [Alicycliphilus denitrificans BC]
MTAWIDHFLFGLYPYICLAVFFIGSWVRFDRDQYTWKSDSSQLLRTGSLRWASNLFHIGVLFLFFGHFVG
MLTPHALYEPFISAGNKQLLAMVSGGAAGLLAFIGVTLLLHRRLTDARIRATSKTSDIALLWIFWVQLAL
GLATIPLSAQHLDGSVMMRLAEWGQRIVTFRSGAVEMLVGTGWIFKAHLFLGMTVFLIFPFTRLVHIWSG
FGTLAYVLRPYQLVRARRLNVPAGQNQPRRSL
>gi|319761234|ref|YP_004125171.1| ppic-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans BC]
MTTTTCGSHACGCGGSAAPVADTPVARINGIALHAPGEQLPEELLRQRACTELLRQQAQREGLLAQDDAP
GMDGATSIAATQAIEQLLERALQVPEPSEEACRRYHAAHPTLHGEGERLRLRHVLFAVTPGVDVKQLRQR
AESVLLDLRCADDGGVRFAEAARQWSNCPSGQQGGELGWLTQADCAPEFAREIFGKAEVGVLSRLVHSRF
GLHVVEVCEREAGRALVFEEVQASVALLLRQQAWINALRQYLQLLAGAAEVEGVQLDAADTPLVQ
>gi|319761235|ref|YP_004125172.1| carbonate dehydratase [Alicycliphilus denitrificans BC]
MPDDELLQRLRRFHLDDFPQYREQFQTLVDQGQHPTTLFIGCSDSRLVPYLLTGAGPGELFLVRNVGAFV
PPYDGSYGHHGTAAAIEFAVLNLNVSRIVVCGHSHCGAIKALYGDVSPEAKNLQRWLDLGREAVLPVQPG
PEALRRTEQRAVVLQLERLMDYPMVRRRVQDGRITLHGWHYVIEEGEVHVFDVQNGGFVAASKAQSSGTG
PYPPYVEHDGQVLVD
>gi|319761236|ref|YP_004125173.1| nitroreductase [Alicycliphilus denitrificans BC]
MAGRVEAMQAPPADWAAALLQARQTILPKRLGAPGPDAAQLQAIMAAAAHAPDHGCLLPWRFVLVPQEAR
TALAEAFAQALRERDPEATPAQQEQAREKAYRAPALLLLVVDELRGDPGIAPCERILSAGCAVQNLLLTA
TALGFGSALTSGKALQSQALRTLFALQEGERALCFVSVGTVLSRKPGRARPAPAQYVGTLVPGRGVQPWK
QERTLA
>gi|319761237|ref|YP_004125174.1| hypothetical protein Alide_0515 [Alicycliphilus denitrificans BC]
MKTEINSFDDLLRAARAHRERQRLLFVFAGSELPDDATPAQRERFAQGEGGVLVPLMCVDKLPEEIESFD
ALLRESRQFENPAQPWRLVFTAALSGTPGKAPSDEDADRVLRRMVEAVKTGAFSAYLPFNREGQPVRLG
>gi|319761238|ref|YP_004125175.1| hemerythrin hhe cation binding domain protein [Alicycliphilus denitrificans BC]
MTTRVSLPGMHTPGAGFDEPFAMLDACHDRVRRSLDLLERLRAYLQDKGCDDSARQAARDVLRYFDIAAP
LHHEDEELHVFPPLLAQGGDERLAALVRQLQRDHVRMAERWAEARQPLEQLAQGALQAFAPAHETVLDRF
ADCYADHLRHEDDSIYPAARALLDMDAQQAMGREMAVRRGVR
>gi|319761239|ref|YP_004125176.1| hypothetical protein Alide_0517 [Alicycliphilus denitrificans BC]
MQMLYDSDSFVVVHMLPDADRSGATDDTPQPPQLVRHGFEIVDKRSGKEVYLDGSWAELFQQQILAWQLN
TPTQEEVEDTLDGYIGLAQNPVVVH
>gi|319761240|ref|YP_004125177.1| hypothetical protein Alide_0518 [Alicycliphilus denitrificans BC]
MPRRALLLLTTLVLALHWLLLADLPLGGTGQGMPRRMSFHTRMVEPPPPEPEAAPAPPPPAAPRPVRKPR
PRPAPPAPEAPEPAPAAPTSTLTDESPAETAPPATEEGTVGAEADAAPEPPQAAASAAAEPTPAASATPA
PQEPPAESAGVEIRPPGASGAGASTEPPPVRLPPSTRLTFDVTGEVKRFHYSASAELVWRQDGSRYEARQ
QIKAFLLGARSQSSVGQITPRGLRPERFGDKARSERAAHFDFDKHEVIFSANTPRATIGDGAQDRLSVFI
QLGAMLAAAPGRYPPGTQITLTTVGARNADRWTFTVDGPETLDLPVGSTPALKLQRLPREDQHYDQKAEL
WLGTELGYLPVRIRLSQSNGDFVDLLLSGHEAP
>gi|319761241|ref|YP_004125178.1| fumarylacetoacetate (faa) hydrolase [Alicycliphilus denitrificans BC]
MKLATYKDGSRDGQLVVVSRDLGQAHYATGIASRLQQVLDDWNFMAPQLQDLYEQLNAGRARHAFPFDPR
QCMAPLPRAYQWADGSAYINHVELVRKARNAEVPASFYTDPLMYQGGSDDFLGPCDDVAVPSEAMGIDFE
AEIAVVTGDVRMGASPEQALDGIRLVMLANDWSLRNLIPAELAKGFGFFQSKPATAFSPVAVTPDELGDA
WEGGRVHLTLQSTWNGRKVGMCDAGPEMTFHFGQLIAHIAKTRNVRAGSIVGSGTVSNKDWTRGYSCIAE
KRCIEAIQDGQPSTEFMQYGDTIRIEMKGRDGQSLFGAIDQQIVPISEG
>gi|319761242|ref|YP_004125179.1| tetratricopeptide tpr_1 repeat-containing protein [Alicycliphilus denitrificans BC]
MTDSKKPNFNIRFQSPAVPAPGFPSAGVSFRVPTMQPPEPALPDDAQACNTQGNTWLQANRVADAIKAYD
RAIALQADYLDPHFNRGNALLRLGRKAEALTAFERAIALAPGLALAHYNRATVLEGMGREQESMDSYRQV
LCIEPGHVQAQFNLGCLHLRRKAYGEAVACMDRVLALEPRLAQAHNNRGNALLKSRHLLEAVASFDQALA
LQPQYADALVNRGNARLQRKEHAQAFADLDRAIRLNPDQAQSRQLMGTLLRDSKRHEEALQEFQRAWRCN
PGQPGLLTDILGAKTAVCDWHNIGAGIDRLGQAVAQRQPGVSPFSVAVLCDDPALQLQAARNFVAADYPE
NPLLGPVAPRADGGRIRVGYYSADFHHHATAILMAELFELHDRERFEWFAFSFGPDSQDAMHARVRQAFD
HFLDVRDRSDEAVARLSRELGIDIAVDLKGFTQDTRFGIFSYRCAPVQVSYLGYPGTTGADYIDYAIADK
VVLPPQARCHFSEKVVYLPHSYQVNDSKRRIADRAFTREALGLPATGFVFCCFNNNYKILPQMLDGWGRI
LHAVEDSVLWLLEDNPAVSRNLLREAQARGIAPQRLVFAQRMPLDEHLARHRLADLFLDTLPCNAHTTAS
DALWAGLPVLTCAGQSFASRVAASLLHAVGLPELVTETQGAYEARAIALARDAGQLDALRSRLHAQAPAS
PLFDARRFARDLEAAYVVMHARAVQGLPPEAFKV
>gi|319761243|ref|YP_004125180.1| molybdopterin dinucleotide-binding region protein [Alicycliphilus denitrificans BC]
MNAPTSPTAAVPAPQLVRGACPHDCPDTCALLTTVENGRAVRVQGNPAHAQTGGVLCAKVSRYAERTHHA
NRILTPLKRTGPKGSGQFAPVPWDEALDDIARRLGAIAACDAQAIVPYSYAGTMGLVQGESMDRRFFHRL
GASLLHRSICSTAGGEGLVHTLGGKVGMKVEFFAEARLILIWGSNSIGSNLHFWRIAQQAKRNGARLVCI
DPRRTETAEKCHEHLQLRPGTDAALALALMHELIENDWLDHDYITRHTLGWPQLRERALTFPPARAAEVC
GLPVEQIRRLARDYGTTKPAAIRLNYGVQRVHGGGNAVRAIACLPALTGAWRQRAGGVLLSSSGAFPVDR
ARLQRPELLAGRAPRTINMVTIGDDLLRESSPAFGPKIEALVVYNSNPVAVAPDSPKVVRGFAREDLFTV
VLEHFQTDTADYADYILPATTQLEHWDVHLAYGHTDVLLNRPAIAPQGQARSNAQIFRDLAARMGFADPC
FADTDEQLCRQAYGEAVDFPRLLADGFAPLPVPDAPFAEGGFPTPSGRCEFYSERLARQGLDPLPGHVPN
HEAAGSSAAYPLAMISPPARNFLNSTFVSLQSLRDIEGRPLLELHPDDAAARGIADGALVRVFNDRGSYE
CHATLNGRARPGVVNGLGIWWRKLGHGGTNVNEITSQALTDMGAGPTFYDCAVQVEALAAS
>gi|319761244|ref|YP_004125181.1| hypothetical protein Alide_0522 [Alicycliphilus denitrificans BC]
MNHCDSAPARVQASRRDVLRLGFGLAAAAGLPGAALAQGGAPWPSKPIRIICGQATGSSNDATARAVGEF
ITARLGAPVVIENKPGAVGTIAGDTVVRSAPDGYTLLCVLHSQLAQAPVLLSKVPFDPDNDLIPIGAFGT
GSSPAVVRSGLPVNSMRELIEYAKKTPVSVGNYGIGSGWQIMVTQLVKDTGAQFNIVNYRGTGPMVLDLM
AGNIDVGAGSLAGLAPGLQNGKFRAIHLISGSSRNPALPNLQTWEEAGFTGEAYTATQESNMFLAPKGTP
HEVIERLAAVIDASYRESPRIKTLMEQLGQVRPPWTGEDLRQFVRTTWPAYRRLTKALNLQVG
>gi|319761245|ref|YP_004125182.1| citryl-CoA lyase [Alicycliphilus denitrificans BC]
MNRPRRLRRCQLSVPGSSEKMMEKAAGLGVDYVFLDLEDAVAPAEKRPARQKIVRALNTLPWGRTVRCVR
VNDLTTEYAYEDIIEVVEGARGNLDVIMLPKALSAADIQFVDKLLTMMEKKLGLTKRIGLDVLIEEVEGL
QQVDAIAAASPRLECLIFGMGDYSASQGVSLKDIGGASGYPGDLWHYQRQKITVAARCNRIDAVDGPYAN
FKDPAAYEEECRRAMTLGMVGKWAIHPSQVEIAQRVFSPRAEDVVRARRMMAAYDEALAQGLGAVQFEGK
MIDIASVRIVRNLVERADLIGM
>gi|319761246|ref|YP_004125183.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MTAPGTPAFGALQGLRVLDLTQMLAGPYATMLLADQGADVIKVEPPGGDATRRHGPFLPGARPFDEGGFG
AYFGSVNRNKRSIVVDLKSEAGKAQLIAMVRQADVLVENYRAGVMEGLGLSYETLAAHNPRLVYAALRGF
GDPRSGETPYTHWPAYDPVAQAMGGIMGVTGPEVGGAPTKIGPGVGDLLPAMYLAYAVAAACWSVQRTGQ
GQFVDVAMADAVLALCERIVYQYSAAGVDSRPDGNGHPLLCPFGIFPASDGYVSLGVPNDRFWEPLARIM
GRADLAADPRCASNEARVRHRAFVEAEVGAWTRRHTQAELVRLLGGRIPFGPVLYAQDIFHDPHFQARGM
LVPTEQPGAERLLTIAGTPIHMGRTPGGVHRRAPLVDEHAGEILREFGLQPAPTSPQPSP
>gi|319761247|ref|YP_004125184.1| hypothetical protein Alide_0525 [Alicycliphilus denitrificans BC]
MTNRAALTSPDNYFEDFPVGRVIRHARGKTVTEMDNVLLTNLVMNTAEGHFNEDRMRQAAPGAIFSQRVV
FGGINLSMVIGLASQDTAEQCVREVGLTAIKLSHPVFHGDTLYAYSEVLQADEEPGGATGRVRFRHYGVN
QDRKLCVQAERTVILRRRPDPATGATA
>gi|319761248|ref|YP_004125185.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MNTTPTIDGKGYMTEERIMIRDAARDFTMNEVLPVANQLDGPDGEIPMELRRKMADMGYFGITIPEEYGG
MGLGTFEYCLICEQLARGWMSVASLVARAQGGFIKNEMPEEMRRKYLPRVVRGEFLNASALSEPDTGSDL
ASISCRAELVGDEWVLNGNKYWCTFADGADYINVFARTAKPTHPKKRWEGISCFLIEKKRGEFPPGMVGQ
PIPKIGYFGWKTFELALNDLRVPRENLIGAPGQAFLIMAKGLETARAHTAARAIGLAQGALEDAIAYARE
RKQFGMPIAEHQAIRFKIATMATEVEAARQLLHYVCSAIDSGRRCDTEASMVKLFATEMAERVTSEALQI
FGGAGYTKLFAVERHWRDARLTKIFEGTSEIQQRIIANNLLGKSVLEDMIASRAFESAAGARTEAA
>gi|319761249|ref|YP_004125186.1| maoc domain protein dehydratase [Alicycliphilus denitrificans BC]
MTTTTDDIVDFLERSAAEWPRGNRFEDFAIGRRFRHHWGRTVTEADNTLFSTLTLAYNPVYTNAHLARAE
GLPGSPVNPLLVFNVVFGLSVEDLSEGGGPFLGVDDLEYLQPVQPGETLYAESEVIQARLADKRPGYGIV
QWHTVGRNAAGAPVIAFKRANLVRTRS
>gi|319761250|ref|YP_004125187.1| mmge/prpd family protein [Alicycliphilus denitrificans BC]
MTTEAAALRAVQGIAARPPGELTDTLAGLMCEGGADAVPDEARECARHALLDWACVALAGMREPAVRIVA
RLHDPQWEPSVGLVPFTGPSAPWAVLVNGTAGHALDYDDVNSRMHGHPSVPVVPTALAASALRGCSGRQL
LDAVVLGHEAEALVGEQFGGAHYANGFHATGTIGTFGAAAAAAHVLGLTDAQARHALGLAATQAAGLKCM
FGTMAKPLHAGKAAMNGLWAARLAQQGFTAAADGIEGAQGFAATQCTGLREAPVVSERWAVQDTLYKYHA
ACYLTHSAIEALRALLARTRLAPEDVERLDVHVPPGHDSVCNIAAPATGLQVKFSLRHLMAMVAHGRDTA
DLDAYTDALACDADLVRWRERVQVRFEHLPSPKGARVELHARGGAVHAHYADVGVPREDLPAQWRALVAK
GRAVTRGVLAPGRFDALVRCIETLERQPDLLSLHEAITT
>gi|319761251|ref|YP_004125188.1| citryl-CoA lyase [Alicycliphilus denitrificans BC]
MTQATSPIGAMRSVLYMPGDKERALQKIPGLAADVVVLDLEDAVAPEKKAEARERIVQTLAEPANAARAL
VVRTNGVDTPEFAADLQAVARARPAAVLIPKYETLEALQALRDGLRAAGAPGLPVWAMVETPLGIADIAR
LADANQAPGEAYPLTTLVIGTNDIARLTGTRMDDGRRHMLAWLSTVLIHAKARGLRVLDGVYNDFSDAEG
FAREAAQARAMGFDGKTLIHPAQIAPAHVAFAPTPEERAWAEKVVQAFALPENQGRGAIKLDGGMVELLH
LEIARRWLAAA
>gi|319761252|ref|YP_004125189.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MASVPDANVKSATRVLELLEFFAEHRRPMSTADVVNELGYPQSSSTVLLQTLMRLRYLDYDRKSRKYFPT
VRVALLGSWITENLYSERSLSKIVNDLHARTSATVILGLQNDIYVQYINVCQTPQRRSQLKWYLKPGSLR
PLARSSVGKAVLSSKPDAELIYLLRRINASETRPENRVSEADLLEEMDRIRETGYSLTTGTVNPQAGVVA
CLIPSHPQQPVMALGIGAENAELLRNKDRYLHLLREALEPFC
>gi|319761253|ref|YP_004125190.1| amidohydrolase [Alicycliphilus denitrificans BC]
MKVIDSIAAAAPAIAAVRRDIHAHPELCFKEERTADLIAAKLTEWGIPIHRGLGTTGVVGIVHGRDGGAC
GRAVGLRADIDALPMQEFNTFAHASKHAGKMHACGHDGHTAMLLAAAQHLAGHRDFDGTVYLIFQPAEEG
GGGAREMIKDGLFERFPMQAVFGMHNWPGMPAGSFAVSPGPVMASSNEFKITIHGKGSHGAMPHLGIDPV
PVACQMVQAFQTIISRNKKPIEAGVISVTMIRAGEATNVVPDFCVLQGTVRTFSIELLDMIERRMRQVAE
HTCAAFEATCEFEFLRNYPPTVNSAAEAEFARRVMAGIVGADKVLAQEPTGGAEDFSFMLQAKPGAYVFI
ANGDGTHRDMGHGAGPCTLHNPSYDFNDALIPLGGTYWVELARQWLAQPAA
>gi|319761254|ref|YP_004125191.1| acyl-CoA-binding protein acbp [Alicycliphilus denitrificans BC]
MSDLNAAFEAAVANSKLLTERPDNPTLLKIYALYKQATAGDNAEKKPSFSDIVGRAKWDAWEKLKGTASD
AAKQQYIDLIESLRG
>gi|319761255|ref|YP_004125192.1| aminopeptidase [Alicycliphilus denitrificans BC]
MQRIASSLLIPLLALLLSGCAHSGGTPGYYWQSLRGHLALLQAARPVQEWIDSPDTPAPLRARLELARKA
RAFSITDLALPDNASYRRYARLDRRAAVWNVVAAGPYSLELHRWCFPVTGCIGYRGYFDEADARAEAARL
AATGLEVNVYGVPAYSTLGYSNWLGGDPLLSTFIAWPEGDFVRLLFHELAHQQVYAEGDTAFNESYATAV
ERLGVQRWLERHATPAVRAQFAASEQRRAQFRALTRATRERLAAIYEQKSDTTPDHTALAAMKSEAMLQF
HANYALLRSRWLAAHTPPAQLAPLDQWVREANNASFAAQGAYDDLVPAFVALFEREGRDWPRFHAAVRAL
AKMPQPGREEALKALAG
>gi|319761256|ref|YP_004125193.1| DNA-3-methyladenine glycosylase i [Alicycliphilus denitrificans BC]
MQNTAMPDTTDTGLFTDDGGHARCFWCRASPLYRHYHDHEWGFPVADERRLFEKLCLEGFQAGLSWITIL
NKREAFRAAMANFEAEELARFGPAEVERLMGIAAIVRHRGKIESAINNARRVLELRGEFGSLAAYVWRYA
PQAAQDRPGRMTLEAVRALTTSAASAALSKDLKKRGFSFVGPTTMYAFMQAMGLVNDHIEGCGARAAAHA
ARAAFAPPQ
>gi|319761257|ref|YP_004125194.1| hypothetical protein Alide_0535 [Alicycliphilus denitrificans BC]
MGNKIVTEADRKRTPRPTPMPGMPVATHGRGQRVSLERGTATRSKKNPGKRHG
>gi|319761258|ref|YP_004125195.1| cyclopropane-fatty-acyl-phospholipid synthase [Alicycliphilus denitrificans BC]
MKHLLNSLESSLAQSPVGIAVELPGGLRLGNANADLRLRFRDRMAVVALAMGEIGNVGAAIVEGRVALEG
SMRQLMAAAAAMLRSDPARDEQVAWWRRVLLRARSMAAHTRARDAQHIQYHYDLSDDFYALWLDPRRVYS
CAYFRADGMTLAQAQEAKLDHICRKLMLRPGERFLDIGAGWGGLLLWAAQHYGVDATGITLSRNQHAHVQ
RLIEERGLQGRVRMQLLDYRVLQVPEPFDKIASVGMFEHVGHAQMGHYFATVHRLLRPGGLLMNHGITAG
GLDNAAGLGAGMGDFIERYIFPGGELMHVSRALQEMARAGLEMVDTENLRPHYARTLWAWSDRLETRLDE
ARRILVDQHGQEQGEKALRAYRLYLAGCALAFEHGWVALHQVLAARPTGEVAAGALAGAQSDYPFNRAYM
YEDRAAAHAAAS
>gi|319761259|ref|YP_004125196.1| hypothetical protein Alide_0537 [Alicycliphilus denitrificans BC]
MLFKFKSRATADLIMLEPNGRQLLEIIGKTPDPHGIVTAAQIPAAIAALEAAVAADEANAGAPAEEAEGA
DGEQQPPRDTVRLRQRAAPFIDMLRRSAAEDHDVVW
>gi|319761260|ref|YP_004125197.1| hypothetical protein Alide_0538 [Alicycliphilus denitrificans BC]
MHIDTPRRQSLRAIAAAFALGLGAAGAAQAQATWPTKPVRIVVPFAAGGTTDILARAIAPELGKAFGQQF
IVDNRGGAGGNIGAELVAKSAGDGYTLLMGTVGTHGINRALYARLPYDPIKDFAPITLVASVPNVMVMNT
EKARALGIGNVQDFIRYAKANPGKLNMASSGNGTSIHLAGELFKTMTGTFMLHMPYRGSAPALLDMVGGN
MDVMFDNLPSSMAHIKAGKLKALAVTSAQRSAALPDVPTVEEAGGPALKGFEASSWFGLLAPAGTPPDVV
QRIQQEVAKALASPAVKERLLAQGAIPGGNTPAEFAGLIDSEHRKWAQVVKASGAKVD
>gi|319761261|ref|YP_004125198.1| hypothetical protein Alide_0539 [Alicycliphilus denitrificans BC]
MNHPFKLVLGAAAILAAFGVCAQTYPAAGKTITIVVPFTAGGPTDRVARDLAEALRKPLGGATIVVDNTA
GAGSSIGMAKVARAAPDGYTLLLNHIGMATVPSMYRKLPFNVENDFEYLGIINDVPMTLIGKPTLPANNY
KELTAWIAANKGKVNLANAGLGSASHLCGLMFQSALQTEMTSVPYKGAAPAIADLMGNQVDLLCDQTTNT
TSQIEAKKVKAYAVTTPKRLATPALKGLPTLQELGLKDFQVTIWHGLYAPKGTPAAVVKTINDALKVALK
DPQFVKNEEALGAVVTTDKRLEPAEHKKFVQAETAKWGAVIKAAGSYAD
>gi|319761262|ref|YP_004125199.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MNKFYDALETRSSAEREADQMAALARQIAHAQQAAPAFAEILAGIDAGSIASRGALAQLPVTRKYELQQR
QQAGRAESPFGGFAGMGFGSAMPRVFASPGPIYEPEGARRDYWRMARALYAAGFRAGDLVHNCFSYHFVP
AGSMMETAAHALGCTVFAGGTGQTEQQVQAMADLRPAGYVGTPSFLKIILEKAAEMAVELPSVTKALFSA
EAFPPSLRDWFAERGVTGFQCYGTADLGLIAYETEAREGLVLDEGVIVEIVRPGTGDPVPEGEVGELVVT
TLNPDYPLIRFGTGDLSAVLPGACPTGRTNTRIKGWLGRADQTTKVRGMFVQPGQVAAVVKRFPQVQRAR
LVVSGEMANDQMVLQVETTETAAGLAQLLAEALREVTKLRGEVQMLPPGSLPNDGKVIEDARSYR
>gi|319761263|ref|YP_004125200.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MSAASQPTAAPAASATPLVEVNGIEVIYNHVILVLKGVSLKVPHHSIVALLGGNGAGKTTTLRAISNLLK
GERGEVTKGGITLEGERIENLSPADLVKRGVVQVMEGRHCFAHLTIEENLLTGAYTRSDRGEIAANLEKV
YSYFPRLKTRRTSQAAYTSGGEQQMCAIGRAIMSNPRMVLLDEPSMGLAPQIVDEVFHIVKDLNSKEKVT
FLLAEQNTNMALKYSDYGYIMESGRIVMDGPAQELANNEDVKEFYLGMGGGERKSFKDVKSYKRRKRWLA
>gi|319761264|ref|YP_004125201.1| hypothetical protein Alide_0542 [Alicycliphilus denitrificans BC]
MMFKKAAIAAATVAAGMGALLGSPAAQAQEQFQPLLVYRTGQFAPLGIPWADGKQDYLKLVNARGGINGV
KIAFEECETAYDTAKGVECYERLKSRPGGTASFDTQSTGITYAVSDKAPGDKATIVTAGYGLSQSADGRV
FEWNFPLLGTYWTAADSIIQDILKKEKGSLKGKKIALVYHDSPYGKEPIPLLEKRAAKEGFELLKLPVTA
PGVEQKSTWLQVRQQRPDYVLLWSAGVMTPTAVREAQATGYAREKIYGIWWAGSDHDVKDIGAGAKGYNT
VTIHNTAEHDKVHDEVKAQLYDKGQGTAKDAKELGAMAHTRGMVISMLQVEAIRTAQEKFGKGKVMTSEQ
VRWGLENLNLTQERLNELGFGKILKPIKTSCENHMGTDWSRIAQWDGAKWVAVSDWYQADKSLIDPLVKE
YGEKYAKEKNLKVRSCS
>gi|319761265|ref|YP_004125202.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MFYRENGQFKTSYSADQQIFAVTQDRIAIGLILAVAFVVVPMVASDYFFQAILIPLLIMSLGALGLNILV
GYCGQISLGTAAFMAVGAYAAYNLQARFDGMPLLLALIGGGLIAMVFGVVFGLPSLRIRGLYLAVATLAA
QFFVDWITTRADWVTNNSSSGSVSAKALAIAGWQIDTPMEKYLLCLGILCVLGLAAKNLVRSSVGREWMA
MRDMDVAAAVIGIRPVYAKLSAFAVSSFIVGIAGALWGFVHLGAWEPAAFSLDRSLQLLFMVIIGGLGSI
MGSIFGAAFFILLPLLLNQVPHWLGLPISTATATYLEHMIFGALIVFFLIVEPHGLAKLWSTARQKLRVW
PFPH
>gi|319761266|ref|YP_004125203.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MGFFLETLIGGLMVGTLYALIAIGFVLIFKASGVFNFAQGAMVLFSALAMARFAEWIPGWLGMTPGLVGN
LLAIVVTLALMVVVAWVIERFALRHLVNQEPIALLMATLGIAYLLDGLGPMVFGSAVYSINVGMPKDPVF
VMDGLIEGGVMISLEDLYAACIAALLVVCLSLFFQKTKTGRALRAVADDHQAAQSIGIPLSRIWVIVWSV
AGGVALVVGIIWGSKLGVQYSLSLVALKALPVVILGGLTSLPGAIIGGLIIGVGEKLSEVYIGPMVGGGI
ETWFAYGLALCFLLVRPQGLFGDKIIDRV
>gi|319761267|ref|YP_004125204.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MTSKKIGDVILDVKNISLRFGGVKALTDISFDVREHEIRSIIGPNGAGKSSMLNCINGVYTPQEGSITFR
GKTFSHMNSRQVAEMGVARTFQNLALFKGMSVIDNIMTGRNLKIKSNLLMQALRIGPAEREEIRHREFVE
HIIDFLEIQAWRKTPVGQLPYGLQKRVDLGRALAMEPQVLLLDEPMAGMNVEEKQDMCRFILDVNDEFGT
TIVLIEHDMGVVMDISDRVVVLDYGKKIGDGAPDEVRDNEDVIRAYLGTAH
>gi|319761268|ref|YP_004125205.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MTTTFPQLLLQHAAQRPDAPALREKEYGIWQTWSWKAAAAEVRLMACGLLSLGFAKGQNLALISDNRPHV
YMGFIAVQSIGGVPIPLYQDAVANEMRFVMEDAEIHFAFAENQEQVDKLLEVRESVPGIAHIIYDDPRGL
RNYDQPGLISTAELVARGRQWDQAHPGVWESMLGQVSPQDVSVILYTSGTTGKPKGVCQTHASFIGAASG
AAEVDKLGPQDSIISYLPPAWVGDHLFSLAQWLVAGYTINCPESASTVSIDMREIGPTYYFAPPRVFEGM
LTSISIRMEDAASFKRRMYEKAMELARRVGSDILDGKPVGALDRLKYRLADFAVYGPLRNVMGLSRIRVA
YTAGAAIGPELFKFFRSIGINLKQFYGQTETCAYVCLQRDGQVDLNSVGQAAPGIELKLADNGEVLVKGV
AVLKEYYKRPDATAEVIDASGYFHTGDAGVIDANGQLRIIDRAKDVGKLRSGAMFAPNYIENKLKFFSHI
KEAVCFGHDRDQVCAFINIDFEAVGNWAERQNLPYAGYVDLASKAKVLELVADCVAQVNADLARESGMAD
TQVARFLVLHKELDPDDDELTRTRKVRRNFIAEKYGVLIDALYAGKGEQFIETQVKFEDGRTGTVSATLK
IIDAKTYPASAAA
>gi|319761269|ref|YP_004125206.1| peptidoglycan-binding domain 1 protein [Alicycliphilus denitrificans BC]
MYAAFLGLAHAPFSIAPDPRYLFMSERHREALAHLLYGLDAGGGFVLLTGEIGTGKTTVCRCFLEQIPAH
CNVAYIFNPKLTVPELLRSICDEFGVVHRPAVPGAETVKDCLDPLNEFLLQQHAAGRNNVLIIDEAQNLA
PDVLEQLRLLTNLETSERKLLQIILIGQPELRAMLARPELEQLAQRVIARYHLQALGPEETRQYIAHRLA
VAGLQGPPPFQRRALARVHALAGGVPRRINLLCDRALLGAYAAGVREVSDAMVRKAAREVFDANAAAPRP
AGGRARWWAAGAGGLLGAAAVAGLGWSMGWWPQPAAVAGRPAAQAPAPQASAAPVAAEAASGASAPQAAA
SAPAVPLTLARFLSAQPAADTAPAWQLLAQAWQASLPADVADPCAVLAPEGLRCWRSRRASLNLLRLLDR
PALLTLQPSDAQQGARGAVLLRLDGAMATLQGVDGATLQVPVVELAPLWHGETATLWKAPANLPAGDDVA
ATAAGAAWLDRQLALAGAAPAGSRGVSPEVRRARVHQFQLGQGLTPDGQAGPLTLMLLNRAAGVQEPRLR
GGA
>gi|319761270|ref|YP_004125207.1| hypothetical protein Alide_0548 [Alicycliphilus denitrificans BC]
MSYILDALRRAQAERGRGSVPGLHTPTTPAAGLPAADASPARSMLRALLALALGVGLAGGAWWLWRTPSA
PASVAAPSTPVAAVAPPAPPAAVQAAPASAPAAAPASAARPAQAAPPPRPAQPAARAERRAAEAGPAPAA
KAPPPRSAPPKPAEAPAAPVFAQADLPPAVREQLPTLQLAGLTYSSNPLYRMVIVNRQVLHEGDQAAPGL
VLERIEPGRTVWSFRGYRYALPVQ
>gi|319761271|ref|YP_004125208.1| cyclic nucleotide-binding protein [Alicycliphilus denitrificans BC]
MLACMNQDASLHQRRRPPTAHELGGIPWLGLLQPAERERAVAALVVGDARPGDYVCRTGRSPTYWFGVVE
GLLKVAIESAQGEAVTFTGMPPGGWFGEGTAIKREPYRFNVQALRASLVAGLPIDDFHWLLDHSIGFNRF
IMDQLNERLGQFIAAREIDRLGSPDARVARGLAALFNPVLYPGVGQVLRITQQELAYLVGLSRQRVNEAL
AFLEAQGAIRVEYGGLRVLDLQALRSSPFARTEGDEGARTRRRAAAGAAHPAL
>gi|319761272|ref|YP_004125209.1| RNA-binding s4 domain protein [Alicycliphilus denitrificans BC]
MPDTPSRIHPPATQAPSAAPRTRLVLRRPDPAAKAPSTARPAQARAPAARPPAAADGRMRLNKRMADLGL
CSRREADDWIAQGWVRVNGQVAVMGLQVGPQDRIEVDRAAQGRQSQQVTILLHKPMGYVSGQAEDGHTPA
VALVNARSHWQGDASRMRFAPAQLKGLAPCGRLDIDSVGLLVLTQDGRVARQLIGEDSAVDKEYLVRVQY
GERTQDVRAVFPADRLALLCHGLLLDGQPLKPAQVDWQNPEQLRFVLREGKKRQIRRMCELVGLKVVGLK
RIRIGRVLLGNLPVGQWRYLAPGERF
>gi|319761273|ref|YP_004125210.1| heat shock protein hsp90-like protein [Alicycliphilus denitrificans BC]
MSKHTHSFQAEVAQLLHLVTHSLYSNKEIFLRELISNASDACDKLRFEALNDAALYEDAPNLEVRVAFDT
EARTITITDNGIGMSEQEAVDHLGTIAKSGTKEFMSRLTGDQKATASEQGQLIGQFGVGFYSGFIVADRI
TVESRRAGLPAGQGVRWTSGGAGDFEVEQIERPARGTSVILHLRDDAGDYLNAWKLKQIIGKYSDHISLP
ILMEKEEWKEGEKEGEPGQMVKTGEWETVNKASALWTRPKKEITAEQYQDFYKTISHDFENPLTWSHNRV
EGNTEYTQLLYIPAKAPFDLWNRDKKAGVKLYVKRVFIMDDAEALMPSYLRFVKGVIDSNDLPLNVSREL
LQESRDVRLIRDGSVKRVLAMLEDLAKHDRHEASTDAEGVTDVVSEEDKAKEGKYTQFYTEFGAVLKEGL
GEDFANRERIAKLLRFASTSTDSASVSFADYKARMKEGQEAIYYITADTLAAAKNSPQLEVFKKKGIEVL
LMTDRVDEWALNFLHDFDGTPLQSVAKGAVDLGKLQDEAEKKAAEEAAEQFKPVLARLKEALKDKAEDVR
VTTRLVDSPACLVVQDGGMSMQLARLLKQAGQSAPDAKPVLEVNPEHPLVKKLDGSVHFHDLANILFDQA
LLAEGGLPEDPAAYVKRVNALLV
>gi|319761274|ref|YP_004125211.1| hypothetical protein Alide_0552 [Alicycliphilus denitrificans BC]
MKTAPNALARDGRQGRAAGALPWAALALAAMLQGCGSVGAGVGVGIPVGPVSVGVGVGSGGISAGVGAGA
GPLGVGVGVNQRGQVLGGAGVGVSTGVGGARVGAGVGTSTVLHDPGQPAATPAEAPSAPAQPAAPAPGGG
EIQWRDSSGRIVPACRVEGRC
>gi|319761275|ref|YP_004125212.1| hypothetical protein Alide_0553 [Alicycliphilus denitrificans BC]
MRIKTVLATVALALGFTGAAQAQTSNYPNRPITLVVPAGAGGGTDVVARVLADQLGKRLGQAVVVDNKTG
ASGMLGTQAVARAAPDGYTLLVAYSTPVFYAHHIFAKVPYDIRKDFEFITQLASTSLVMMVNANVPVKNM
KDFMAWAQANKGKINYGSYGQGSAGHLMSAYLSDSRKLDMTHVAYKSEAPHIQDLAGGVVSWGLGTIAAA
QGVLKDNRVRPIAIFGPKRLAELPDVATMAEQGFADPEFNTVAWFTLLAPAGTPKPIVQRLEKEAVEIIH
STAMKARFQVFGLESVPGGAAQFHKDFDAVDPVIQKLVKISGAKAD
>gi|319761276|ref|YP_004125213.1| aminoglycoside phosphotransferase [Alicycliphilus denitrificans BC]
MTTLAAHDTPLHPYATLTPDLVLDALASVGLHGDGRLMALGSYENRVYQVTLEDGSRVVAKFYRPGRWSE
AQILEEHAFALELAGAEVPVIAPLLLQGRSLHRHAGFDFAVSPWRGGRMPELDDFEVLEWLGRYLARIHN
VGAARPFVHRPRLDLPGFGQEPRDWLLGAQAIPMDQQSAWRDACDEALELIAAGARPSSTGGLFGLKDAT
TIRLHGDCHPGNVLWTPVDDAGHGGPHFVDLDDARMGPAVQDLWMLLSGDRRQRTMQLATLLDGYEQLRP
FDRRELALIEPLRTLRLIHYSAWLARRWSDPIFPLNFPWFGSSDYWRGQVDMLREQIEAMREEPLAA
>gi|319761277|ref|YP_004125214.1| serine/threonine-protein kinase-like domain protein [Alicycliphilus denitrificans BC]
MKLLTPGTEIDGFVVHECIHAGGMAHIYRVGYANAARNPGFPLAMKIPRMTAGDGAENIVSFEVELTILP
TLSGHHVPRFVAAGDLMRLPYLVMEYVEGRTLQHWLEEHPRTLTPEGALQDTADIARIGSAMALAAHSIH
QQNVCHLDLKPANVLLREGGSVVLLDFGLSCHAHYPDLLAEEMRKAVGSPTWIAPEQVVGVRGDLRSDIF
AIGVMLYEMATGELPFGAPATQGGMRQRLWMTPAPPRQHRPDLPEWLQEVILRCLEPEAAQRYPSAAHLA
FDLANPEQVPITERGRRLRGPGLAVHFKRWIKAAGMHYQPSPLPARQIEQVPIVMVAVPHDDVTDATLYS
LREAAARSLGIRPGARLACVTVISPSASSTSDSARSETMLHRTHLARLKQWAAGLDLSRHSASYHVLEAG
DVAQALVRYAEGNRVGMMILGAATHGLQLQRFIDTVPIRVARDAPCTVILVKQQLPFDALGQ
>gi|319761278|ref|YP_004125215.1| metallophosphoesterase [Alicycliphilus denitrificans BC]
MKIALLSDIHANLQALEACLEHARAHGARQFALLGDLVGYGADPGPVLDRVMQLVAEGTPCVRGNHDAAA
VAPPAAAENLGEQSAQWTHPRLNARQLAFLAGLPLATRMGMDALLVHASADGPERWHYVADGNAAERSMA
AATQMDPAIRYVFSGHVHEQALYFLTPTAKLMRFSPQPGVPVPVPPHRQWLAIVGSCGQPRDGDTRAMYA
LFDPDAATITFQRVPYDHMAAAAAVRAGGLPAFFADRLEKGR
>gi|319761279|ref|YP_004125216.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MRPLQGVRVLDLSSVIFGPLASQVLADYGAEVVKIEPPKGDSTRHTGPAAEPGMAAMFLGSNRSKKSVAL
DLKQPAAQKALQALIGTADVFMHSMRPQKLAGLGLAPEALRARHPRLVYASLLGFLPGPYAGRPAYDDVI
QGMSGLADLMDQQSGEARYLPTIAADKTCGHVAAHAILAALWQRERTGQGAFVEVPMFESMVGFNLVEHF
YGQHFEPPRSAPGYPRVLAPWRRPYRTADGLVAMMPYTDVHWQRFFAEVGAPQHAGDPRFADIAARTAHI
AELLELASGYVVRQTTAHWLAACERLEIPAAPVARLDELRSDEHLAATGFFEEVQDPAMGTVRFPGVGVR
FDGRRPPVAMPPRLGEHTRALLAEAGLDAPQIQALLDQGAAIAPQPKN
>gi|319761280|ref|YP_004125217.1| hypothetical protein Alide_0558 [Alicycliphilus denitrificans BC]
MHAPTTMDRTAPRLGQGFVWQDLQVGQRFRTFRRTVTETDLVQFIGVTGMLEAIFIEEGYEGAAMPGRAV
PGALTYALIEGFILQTMIQGTGLAMLELHQKILAPVVVGDTIEAMVEVTDIRPTSRSGRAVVTSRIDVFN
QNAVLVMTYTATRLLAGRG
>gi|319761281|ref|YP_004125218.1| extra-cytoplasmic solute receptor [Alicycliphilus denitrificans BC]
MDSTRTRAPRRRACLALAACAALTVLASPGAHAQAYPAKPITMVVPFPPGGPTDMVARLLAQKLSEQMGQ
PVVVDNKPGANGNIGGVYVSKAPADGYTVLYNTSSITLSPALYKSMQYDVLRDLAPVALTAVVPLALVVN
PEVPANNVKDFVAYAKAHPGKLSYGSAGNGNVTHLAAYQFVKAQGIEATHVPYRGSAPADVDLAAGQIQF
MTDTINSVMSFVKDKRMKLLAVTTAKRMSLFPDVPTLAETIMPGFEAGAWQGVMVPAGTPEPVVQRLNAE
INKALQNPGLREKLAVQGAEPLGSSVQEYGAYLRKELARWASVVKATGITLD
>gi|319761282|ref|YP_004125219.1| 3-hydroxyacyl-CoA dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MTITTVGIIGAGTMGNGIAQACAVSGINVVMVDVSDAAVQKGVATVAGSLDRLIKKEKITAADKDAALSR
IKGSTSYDDLKAAQIVIEAATENYELKLKILKQVDALVAPEVILASNTSSISITKLAAATGRADRFIGMH
FFNPVPMMALVEIIRGLQTSDATHGAVKQLAERLGKSPITVKNAPGFVVNRILVPMINEAFFVLAEGLAT
PEDIDAGMKLGCNQPIGPLALADMVGLDVCLAVMDVYLAEFGDSKYRACPLLREMVAAGRLGRKTGRGVY
QY
>gi|319761283|ref|YP_004125220.1| glucose-methanol-choline oxidoreductase [Alicycliphilus denitrificans BC]
MRDFDYVVIGGGSAGCVLAGRLSEDPAVRVGLLEAGGSDDSVLIHCPAGLAVMARTGRYNWGLQTTAQPG
LGGRRGYQPRGKVLGGSSSVNAMVYVRGHPDDYEHWAAAGNPGWGWRDVLPYFLRAEHNERWDNAWHGRG
GPLNVMDLRSPNRFSAVFVDAAVQAGHARNDDFNGPVQEGVGLYQVTHRNGERCSAAKAYLTPHLSRPNL
QVITGAHATRILFEGRRAVGVEYRQGGRLQQVRARREVLLSAGALLSPQLLMLSGVGPADELQRHGIGVL
HHLPGVGQNLHDHPDVVQVVDAPRLTDLFGLSPRGALNLLRGIRQWRAQRSGMLTTNFAEAGGFLKSSPD
EARPDLQLHFVIGKLVDHGRKTVLGHGYSLHVCLLQPQSRGSVRLASGDPLQAPLIDPGFLAHDGDMARM
VRGFQMGRHILRQPALAQYGGSEGPALAQAQTEEQIAQFIRRHADTIYHPVGSCRMGPGPLDVVDGELRV
HGLQGLRVVDASIMPRIVSGNTNAPTVMIAERAADLIKKF
>gi|319761284|ref|YP_004125221.1| abc-2 type transporter, nodj family [Alicycliphilus denitrificans BC]
MAPMTDPSIWRAPDLSLRWWPVFLRNLLVWRKLAIPSLVGNIAEPLMWLVAFGYGMGALVGEVQVGGDGG
ARVPYILFLASGSICMSAMNAASFEALYSAFSRMHVQKTWDGIMNAPISLDSVLLAEMLWAAFKALFTAT
AILGVMLALGISHAPKLLVAWPVLLAVGIMFSSIALIFNALAQGYDFFTYYFTLVLTPMMFLSGVFFPRE
QLPTAVRIASDWLPLTNAVELVRPLFMDQWPAHPLRHGLVVAVTTIAAYWVALALTRRRFRA
>gi|319761285|ref|YP_004125222.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MNVLFEAQDLRKRYGDATVVDGVSFAIAPGECLGVIGPNGAGKTTTIRMCLGLTAPDAGSVRFYPGGGAA
PLSMPLDALAIKAQLGVVAQFDSLDPDFSCAENLRVFGRYFGLKGAAMDARIGPLLEFAALTSKAGARPG
ELSGGMRRRLSLARALVNDPRLLLLDEPTTGLDPQARHLMWERLQRLLQQGKSILLTTHFMDEAERLCSR
LLVLDHGRKIAEGRPRELIAEHLESDVVEAYGNGALTLAHDAQLRPLARRIEVSGETVFFYTQDARPLLQ
ALTGHGHLRTLHRPANLEDLFLKLTGRQIREDA
>gi|319761286|ref|YP_004125223.1| tannase and feruloyl esterase [Alicycliphilus denitrificans BC]
MTTPPAIRPPWPRGARLLLTASAALALAACGGGSHHFSFDTASRNLATQQVAADQIGLPTKGAVVTSVET
PTAASGPQPPASIRANIAIAPVDTAAPAIKMGLLLPKEWNGKVVMLGGGGYNGTIPSLYTYSAAPASQGP
YPLLDQGYAVFASDSGHQAGAAGSRDGSFGTNDEAAANFSGAALKKVSDVADVLVTRFYGRKPGKRYFIG
GSTGGREALAVAQKWPADWDGVVSWYPAWNAASLDLQFGRLSRAFAQPDAYPSLAQRKLLRQAAMARCDA
LDGIADGIVSNVAACNAQFDPATAQFEGKPLRCPSGGNENDGCLSDAMIAALHAYNTPITFGSPLGSGET
QYPGFNVWGSELGETGPSPLQPTVTLLAMNTTAPASPAPLTAPYWAVFWDQWVRYFVTRDANFDSLSLDP
QNPGPWAGRIQELTKLQDINSTDLSAFQKRGGKLLMAHGTADVLVSTRATAQYYERLVQTMGADTVKSFA
RYYEVPGYGHAASTAFNANWDSLKALDQWVSIGTAPAGQVVTDTAGVPGRTRPLCEYPGWPRYGGTGDAN
KAESFSCVAP
>gi|319761287|ref|YP_004125224.1| amp nucleosidase [Alicycliphilus denitrificans BC]
MASSLAFITEPSFHAEPADALAQVQHIYQQQIGHLRDAMQRFVAGETPANHVRACYPYVRVQIATVARAA
TQLAYGFVEGPGCYETTLTRPDLFAGYYTEQFRLLRASHGVELEVGLSRQPIPIHFSFAEHDYIEGTLSP
ERRTLMRDVFDLPDLAAMDDGIANGTWTPSAGEAQPLSLFTGPRVDYSLHRLRHYTGTLPEWFQNFVLFT
NYQFYIDEFVRLGHAEMARADSEYVAFIEPGNVVTRRTGLPAQPGDELGAPPPRLPQMPAYHLVRADNSG
ITMVNIGVGPANAKTITDHIAVLRPHAWMMLGHCAGLRNSQQLGDYVLAHAYVREDHVLDEELPLWVPIP
ALAEIQVALQQAVAEVTQMGGPDLKRIMRTGTVASTDNRNWELLPDNMPQRRFSQSRAVALDMESATIAA
NGFRFRVPYGTLLCVSDKPLHGEIKLPGMANHFYRERVQQHLLIGMRAIDILRAGGVQRLHSRKLRSFAE
VAFQ
>gi|319761288|ref|YP_004125225.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MPAKPPSDPVPSGSDSHASAALLRLVADTVPVMLAYYESPELRCRFANQRFADFMERTADGILGTTARDI
LGEQTWQQILPCVQRALGGETVQHLCQQAGPDGRMRMLEFSLRPQLEPRGGRLATPGILVLVNDVTERLE
AEQAVRQSEERMRKFAEATEEGLAFHRDGRILDANASLQRMTGYTLAELVGRSIFDFIQPEYRALAQEYT
RRGREYPYELAMRHKDGHAIPIEAVGKTLPQQQDEYRVVVVRDITARKQAQERARFLALHDPLTQLPNRR
HLMLQLARTVATAQERRKRSAVLFVDLDHFKTVNESLGHEAGDQLLCEVARRLQEGVKATDFVAHVGGDQ
FVVLLSGLRGRAAAAAAADALIERIRAVYTIGETQLSPSPSVGISVFPDDGYGPDELLRRADAAMQQAKE
SGRGTRLFYTPDMEGQPAEVLQQEHLLREAVFHDALELHYQPQVQVASGRLVGLEALVRWRHPQRGLVGP
DDFIPLAESRGLITPIGRWVLREACRQLKAWHNEGLALVPVAVNLSAIEFRQRDVAGEIARVLQETGLEP
QYLEVEITETTLMQHAEHTRATLQALQAMGVAVTVDDFGTGYSSLTYLKRYPLDKLKVDRSFVADTPADG
DDVAIVTAIVQLARSLQLQSVAEGVQTPEQLTLLQSLGCELAQGFGIAPPMDVRRTRAWLHALPAAAL
>gi|319761289|ref|YP_004125226.1| cation diffusion facilitator family transporter [Alicycliphilus denitrificans BC]
MPHAAARSLHVPAWMTPHNLLRASMGVAVLTIALKTLAWWISGSVGLLSDALESFVNLAGAMFALAMVTV
ARRPADADHPYGHHKAEYFSSGFEGILIVGASIAILWAAVLRLMHPQPLEQLGWGMGLSLLSTACNGLLA
WGMLRAAQVHRSLALEGDARHLMTDVWTSIGVVVGLLTASATGWTWMDPLVAIGVALNILREGGALIWRA
SQGLMDEAMEPTLLARVYTVLQEYGGASGGAVHFDSLTSRRAGARSFVDLHMHVPGRWTLAEAARERSEV
EQALMQAVPGLRATIELLPEDHDTVFEQKVQAGEEQP
>gi|319761290|ref|YP_004125227.1| d-tyrosyl-tRNA(tyr) deacylase [Alicycliphilus denitrificans BC]
MIGLLQRVSEARVEIAGEVAGRIGAGLLALVCAEQGDGEQQADKLLAKILKLRIFTDEAGKMNRSVQDVG
GGLLIVSQFTLAADTRGGNRPGFSQAAAPAEGERLYDYFVARARAAHPEVATGRFGASMQVHLVNDGPVT
IPLRIAP
>gi|319761291|ref|YP_004125228.1| hypothetical protein Alide_0571 [Alicycliphilus denitrificans BC]
MFGTPLLLAAAFVAGALNAVAGGGSFLTLPALVFTGVPPVVANATGTVALLPGYMAGAWGFREDMQPPPG
LSMRAVVALSLAGGSAGAALLLVTPDATFRKVVPWLLLAATALFAFGPQLRQWAGSGRHGAAPWKASLGM
LAVAAYGGYFNGGLGILLLALFGLLGQTQLNAMNGMKNLVSALLTAIAVAIYAAGGIVLWPQALLMMVAA
TLGGYGGARAARRLPAPVLRWGIVATGLVMAGLFFWKQ
>gi|319761292|ref|YP_004125229.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MPDFDPQRLLSRLRFRHLQLLLALHEGGSLRAAAGLMHLTQPALSKALGEIEAAFGAPLFIRTARGLEPT
PQGETAIRGAAMLLNELAHLGQETSQQPAVTQLRIGAPPFVAQGYLPEVLSRLIAEHPHVRVQLQEERVP
LLVECLLAGQLDALITSYPTELPEAAGQPLRYEKLFDAAFTVIAPADHPAGHAHTCDWEYLARQRWVLPT
RSSMLRRMMEEVFRRESVMSPTPVIESTSPFTNLQLVKAGLGISAVPSASLRAAPASLGVREVRAVPGIS
TGPVALIYRGAVANPRVALLRSTLGLAASGETPAP
>gi|319761293|ref|YP_004125230.1| hypothetical protein Alide_0573 [Alicycliphilus denitrificans BC]
MDRRAFLASALAATATSAAWANSFPSRPVRVISPYAAGGGPDVQLRQTGPSLGEVLGQSIVIENKVGAAG
VLAAQYVAQQPADGYTCLLGSNTHLIQKLLQPGLRFDPIGDFAPVSNLMSSPTVLVVRADAPWRTAQELI
AALKAQPTQANYGSGGIGTSAHLAGATLASLAGLQVTHIPLKGSVEIAASLIRGDTQYAFPVAGTGIPQV
QGGKLRALAVTSRKRLSQLPDVPTLQEVLNNELAVQESWFGLWAPAKTPPAVLDTLNAAVRKVAAQPALR
AAFEAVGNEATASASPQAFADFVRSENRKWAEIIQLAGITANS
>gi|319761294|ref|YP_004125231.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MDKPLQGVRVVDMSHVIAGPLASHYLAQLGAEVIKIEPPGGEVMRNSHAPGEKNEGGLPSGFVALNAGKR
SLAVDIRQPEGADIVRALARTADVFIENFRPGVVARYGLGYEDIRALRPDVVYCSISGFGQQGDWARRGA
YDHVVQALTGMMMMAGDDEHAPPVKVGFPVIDVAVGMLGALSITAALHKRNAGTPGARAGQHIDASMLQA
SMMLMYPHACTYLTHGTEPRRVGNRGYTGSPAADTYRCADGWLSTAANTPAQFRLLAGVLGLEALCDDAA
LLDIDAFNAPQGGFVVARDLPALQERLRAAFAGRSAADMEARLNAVGVPAARVRRLGEFLDEARDTGALR
PVRYGAQGSDVQTPGLGFRLGGCEPAPQTPAPGLGQHGHALLQELGIEDAVIEQLHRNGVLGGAHH
>gi|319761295|ref|YP_004125232.1| quinone oxidoreductase, yhdh/yhfp family [Alicycliphilus denitrificans BC]
MFKALLLTQPAPRETHAECVEIDESRLPEGTVRVAVSHSTLNYKDALAITGRSPVVRQFPMVPGIDFAGT
VIDSEDERFRPGDAVLLNGWGVGETHWGGLAQQARVNGDWLIRRPEAFSAQDVMAIGTAGYTAMLCVMAL
QDRGVAPADGPVLVTGANGGVGSIAVALLARLGFEVHASTGRPEQAAHLQALGAAQIVERGSLDAPGKPL
QKERWAAAVDSVGSHTLANVCASVRYGGCVAACGLAQGMDLPATVAPFILRGVSLLGIDSVYAPVQRRER
AWQRLAQELPREVLQRNTEVAGLADVVALAPRLLAGQVRGRVVVDTAR
>gi|319761296|ref|YP_004125233.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MNHLHTGGTMAAQHRSAFRAFAGREALVGGGVRWSYAGLAERCHRMARYFQSLGLGRQDGIAMLAGNTPE
AVVVVIAAQLLGLRYTALHPMGALEDQGFVLRDAGIRLLVVDGARFAGRGAELAALGIARTVVSLGPALF
GADAVAASAAFDGSETPIEVQPDDVHKISYTGGTTGRSKGVVHRQRTALTMLLQQLGGWEWPAPARCLVA
TPISHAGGSLVLPTLLRGGTLVLADKFSPASILQTVQDERISVTFLVPTQIYALLDCADRARYDLSSLQL
VLYGAAPIAPARLAEALRVFGPIFGQIYGQAEAPMTIAYLRRDEHDPQRPALLQSCGRPLPGNEVRLLDA
QLREVPPGEVGELCVRGPLVMDGYLNRPEETAKALAGDWLHTGDMARMDEQGYLYLVDRAKDMIITGGFN
VYSTEVEACLALHPAVAQSAVIGIPNAKWGEAVLAVVVPRPGAACPEPQELMAFVQRHKGPVLAPKAVQF
AEALPLTPLGKVDKKTLRAQFWQGQERLV
>gi|319761297|ref|YP_004125234.1| hypothetical protein Alide_0577 [Alicycliphilus denitrificans BC]
MALNHLTLSLQFARDAATHRAALPRHKVARWIRHALAVDAEITVRIVGSEEGRRLNREFRRKDYATNVLT
FDYQQEPTVLADLVLCAPVVEREAREQGKTLQEHYAHLLVHGALHAQGWDHETGEQDAQEMEAYETEIMR
ELGFADPYAG
>gi|319761298|ref|YP_004125235.1| phoh family protein [Alicycliphilus denitrificans BC]
MILRHTFTPHNNLRLSHLCGPADVHLRTIEAALQVKIAHRHEQFKVDGPKARAAQAMELLQALYEMADHP
IKEDHLQLMLAGDASMMDEEDSPAPLTTRRADLRARTPTQSLYLHNIATHDITFGIGPAGTGKTYLAVAC
AVDALERNAVQRIVLTRPAVEAGERLGFLPGDLTQKVDPYLRPLYDALYELMGFDRVQKAFERNALEIAP
LAFMRGRTLNNAFVILDEAQNTTPEQMKMFLTRIGFGARAVVTGDVSQIDLPKGSLSGLIDAERVLKRVK
GIAVTRFTSADVVRHPLVARIVDAYDAQRSRRGTGE
>gi|319761299|ref|YP_004125236.1| holliday junction DNA helicase ruva [Alicycliphilus denitrificans BC]
MIGKLTGALLEKNPPEVLLDCHGVGYEVLVPMSTFYNLPAVGQPVSLLTQFIVREDAQLLYGFATQQERQ
AFRELIKVSGVGPRTALSILSGLGVADLAQAVSLQEAGRLVKVPGIGKKTAERLLLELKGKLGADMGGRP
HAASADQADILQALLALGYNDKEAAAALKGLPADVGVSEGIKLALKSLAR
>gi|319761300|ref|YP_004125237.1| endoproteinase arg-c [Alicycliphilus denitrificans BC]
MRICTIRWAALPMALALAACGGGSGSSDSGGGGSGTPEAPAWSERIEPYDPGKSAGVAKAAAQTSSALAD
PADTRAVILGPLPESIAKAAAGAPAAPGVPRQIGQPRSVAGTASVAATAALLRWNPGPDGAQVAALRFES
QGARGVRLGVLVQALPPGAVLRFYGAARDEAVEVGAQELRDVAERNARAGAADAVARTYWSPDFGGPQTT
LEVQIPAAASPAAVQLAVPGLSHFTVSPAEAEGGVTAKALGDAGSCEIDVSCDAAYLEQSRSVARMTYVD
ETGASFYCTGTLLNDAASSGTPYFLGANHCISTQAAASTLVTDWLLRAASCGGGVNSGAWRLTGGATLLY
ASAATDTSFMRLNRQAPAGIVYAGSYYGGVPVGTALASVHHPEGDLQKLSLGTLRRYGNCSGGSCGASDS
GSGGFLVLDWQQGSTERGSSGAAAFITIGEQRYVTGQLYGGTASCTAPTGVDYFGRFDLSYRAALYKWLK
PGG
>gi|319761301|ref|YP_004125238.1| dnak-related protein [Alicycliphilus denitrificans BC]
MTAATGSHARHAVGIDLGTSHTVVAHVPLDGSAADIALLAIPQRVSAAEVQAQPLLPSVRYQAAPGELGD
AWRAPWPPLDATEEAPATIGRWARELGAAVPARLVGSSKSWLSHPGVDRTAPILPWGAPEGVDKVSPLAA
SASYLAHVKAAWDAFQPDAPLHRQAVVLTVPASFDEGARTLTLEAARLAGLPAVQLLEEPKAAFHDWLVL
QGDALAARLASSRLVLVVDVGGGTTDLTLIRVEPSPGGLPTLTRTAVGEHLMLGGDNMDLALAHQLEPQF
STGAGERLPAARFAQLVQRCRQAKEQLLAAAAPESATVTLLGGGSKLLAQARSAMLTRAQVLQCVVDGFL
PPARLTDAPARRQGALRGLGLPYPADAAISRHLAQFLARHAGGELPDTVLLNGGVFHAHALAERLTQLLG
EWRGSPVRVLHNPHPDWAVARGAAAHGLAQYQSNQPRGHAGQTSTAPKTIVPRIGGGAARSYWLVLPGKA
GAAPQGVCLLPRGTEEGTRLTLAGRRFALQLGQPVRFALVARSQGQAQAGQIAPLQGEGWVELPPLSTVL
PAPEGRATARAEVQLQACMSEVGVLELRCIDAQDAARSWLLPFAVRGVAAGPRPEGEEESEPKGQTAQAI
ALIERIFGNQAQQVAPKEVRQLRAALEKTLGARESWGLPLLRALFDALLERARRRRRTAEHERAWFNLAG
WCLRPGVGAELDGWRIGQVWQLHAQGLGHAGEAANWTEWWVFWRRVAAGLGEEQQMQLLESVAGCMQKTV
QRGQGKAAWGSYDDMLRLFAAMEAVPWQYRQEMGQWMLARLKRPGEPPQTWWAIGRLAARVPLAANAHKV
MPPEAAQEFLDAALAQDWRRNEHALFAAVQIARMTGDRARDLSDARRALVLDRMRATHAPARWIAMVEQV
TDMDAEDQRRSLGDSLPPGLVLVG
>gi|319761302|ref|YP_004125239.1| heat-shock chaperone protein [Alicycliphilus denitrificans BC]
MTTETIAASAGGASASARYSLGIDLGTTHCALSWVDKAASDGERVAQGVLAIPQLTAPASVEARALLPSF
LYLPHESEFSPADLALPWGASQDGVVGECARTRGAATPIRLVSSAKSWLCHPGVDRRAPLLPADAPPEVQ
RVSPLAASTRYLQHLRRAWTEAHPEAPFDAQDVTVTIPASFDPAARELTAEACKAAGFQRLTLLEEPQAA
LYSWIQASAGAWRKQVAHGDVILVVDVGGGTTDLSLIAVLERGGNLELQRVAVGEHILLGGDNMDLALAY
GVARKLAQEGRQLDAWQTRALAHGCRAAKEQLLQDESLQSVPVVVPSRGSKLVGGSLRTEVTRAEVLQLL
VEGFFPRVSVADRPQTRARAALTQLGLPYAQDAAVTRHLAAFLSRQTGATGQIEGLQGTQAQGASFLHPT
AILFNGGVLKAPQIEQRILEVVNGWLAAEGAPPARLLAGANLDLAVARGAAYYGHVAASGRGVRIRGGTA
QSYYVGVESNMPAVPGMEPPISALCLAPFGMEEGSEVALDAQEFGLVVGEPVRLRFFGSSVRRNDTVGTL
LDFWGPEELVELQEIEAHLPAEGRTPGEVVPVTLHARVTGIGTLELDAVPVGGSERWKVEFDVRADTPAA
>gi|319761303|ref|YP_004125240.1| hypothetical protein Alide_0583 [Alicycliphilus denitrificans BC]
MTEQTPPSFFNRIAMAFALVGDARLAARVARLRGGEALAADAPPREVRVEVPVEKIVEVRVEVPVEKVVE
KRVEVPAATAALQLLGLLQREARFVDFVQEDVAGYQDAEIGAAARVVHEGCRKALREHVTLEPVRPEAEG
SRVTLPPGFDASAVRVSGNVVGQPPFTGTLAHRGWRATAVRLPQLTDTQAAAIIAQAEVEL
>gi|319761304|ref|YP_004125241.1| holliday junction DNA helicase ruvb [Alicycliphilus denitrificans BC]
MTIHTDDFSPAPAPAPARERMVSAAPASQQEEALERALRPKLLQEYVGQAKAREQLEIFIGAARKRSEAL
DHVLLFGPPGLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDLAALLTNLERNDVLFIDEIHRLSPVVEEI
LYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLRDRFGIVARLEFYTPEELALIVMR
SASLLGTPIDDAGGAEIARRSRGTPRIANRLLRRVRDYADVKGTGRITLDMANRALTLLDVDPQGFDVMD
RKLLEAVVHRFDGGPVGLDNIAASIGEESGTIEDVIEPYLIQQGYLQRTPRGRVATLAAYRHLGVAPPRA
AGGLFSE
>gi|319761305|ref|YP_004125242.1| mgtc/sapb transporter [Alicycliphilus denitrificans BC]
MQALHNINLAATLNTLVSLFFAFVFGSVIGLERQIRQRTAGLRTNALVAVGAAVFVDLAMRLDGAGGATR
VVAYVVSGVGFLGAGAIMKEGINVTGLNTAATLWGSAAVGACAGASLVVEAALATFFVLASNTLLRPVVN
HINRRPVSEAAAEATYHVYAMCRQADQADVHERLLELLEAAQYPVRAVQKHPFGSTDTEIEAVLYATSVN
AGELDGVVQRIEELPGVLQAYWNSGTEPTS
>gi|319761306|ref|YP_004125243.1| hypothetical protein Alide_0586 [Alicycliphilus denitrificans BC]
MLHLIRLRALRAPAATGLTHAIAPATAACALERALLAALGQRRPHLLNHLVDQAGPQAFAQALATLEARQ
MVEALCLLADAPRASVCAHLPPSARRRWPTAQARRPRGWRALLRRA
>gi|319761307|ref|YP_004125244.1| hypothetical protein Alide_0587 [Alicycliphilus denitrificans BC]
MTAFRHHAPRRLPPRMSAPCTAQPPAALPALEQALDLDARTVWPTHRIRSFLSTQAAPAHCKPR
>gi|319761308|ref|YP_004125245.1| alanine racemase domain protein [Alicycliphilus denitrificans BC]
MKSTPEHAAIGLRADQIDTPAAVIDLDAMERNIQRMAAFARQNQVRWRPHAKMHKSAAIALLLEQAGACG
HCVQKTSEAEALAAGGVRDLFISNEVIAPAKLLRVARLAARLAADGGRLAIAVDSPEGIARLAGAMDAAG
SDAGIDVLVEIDVGQGRCGVPPGPEAVALARAVAARPRLRFAGLHAYQGGAQHLRATAERRAAIAHAVHA
AAGTRALIEAAGLPVPLVTGAGTGTLAHEATSGVYDELQAGSFLFMDADYAANEPDTTQPAFEHALFIKT
QVISTHPTHAVCDAGHKSHAIDSGLPLVHGLAPAHALHYANGGDEHGILHAAGPQARLPALGQTLWLIPG
HCDPTVNLHDRLLGVRGGLEHGVVERVIGVDARGALT
>gi|319761309|ref|YP_004125246.1| phosphoglycerate mutase [Alicycliphilus denitrificans BC]
MNQATRIIAIRHGETAWNVDTRIQGHLDIPLNDTGLWQARQVGQALADEPVAAIYSSDLLRAWATAQAVA
QATGAPLNPERGLRERSFGSFQGRTFEQIEREVPEQALRWRKRDPDFAPDGGGESLTMLRERIACTVHQI
AARHSGQQIVLVAHGGVMDVLYRLATRLDLQAPRTWQLTNAAINRLLWTGDHGLALVGWADTQHLEDSSR
DEIHS
>gi|319761310|ref|YP_004125247.1| hypothetical protein Alide_0590 [Alicycliphilus denitrificans BC]
MTYMRHLCTLVLCAAIGLLAGCAGPRLVESDVSSFSTLTTLPSPPTYRIERLPSQQAHEATFAPIQAQAE
AALARVGLRRDDANPRLIAQLGAEGGYATPRYWSNYGPDPFYGRWGWGWGYGGRWGWGMNWMMDSPPTLY
HRRVSLVLRDAASQQVVYETSAVYEDVWTSDPAIYGVLFDQALTDFPRPPQGPRKLRTELTPQP
>gi|319761311|ref|YP_004125248.1| pp-loop domain protein [Alicycliphilus denitrificans BC]
MNATLNAADWIGEEPATDNRKIEREQIKLEKRLCREVGRAILDFNMIEEGDRIMVCMSGGKDSYTLLDIL
RRLQKRAPVKFDIVAVNLDQKQPGFPEHVLPDYFKSIGVEYHIENQDTYSVVKRVVPEGKTTCSLCSRLR
RAILYKVADELRCTKLALGHHRDDIVATLMLNMFYGGRMKGMPPKLVSDDGRHVVIRPLCYVPEKDTARW
AQYQQFPIIPCNLCGSQEGLQRVVVGEMLREWDKKFPGRIESMLRAMGHVVTTHLMDPKLHDFRNAKATG
IADPDGDTAFDHEEFPAAPGLPGMQVVQIG
>gi|319761312|ref|YP_004125249.1| dihydroneopterin aldolase [Alicycliphilus denitrificans BC]
MTEFFYHSRPGEGRQALTLTGLRFHANLGILDHEKTAPQPIQVDAELNLGPQPLAPRDDDIRHVLDYRKV
RQIIIDECTAEHVNLLESLIGKLAQRLMHLPGVLGVRVKIAKLEIFDDCEVAIRVETGQW
>gi|319761313|ref|YP_004125250.1| dihydroneopterin aldolase [Alicycliphilus denitrificans BC]
MNSILLAFGAIDARLATGCRALSLRRHEAAVRIGVHAHERLAAQRMWFDVDLCVKLDHAPAARDHISETL
DYDFIRDVIAREVGSQHHELQESLCDAIAAALLQSPGVHAVRVATRKPDIYPDSASIGVERVCIKPW
>gi|319761314|ref|YP_004125251.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MSESVQQDDWVLVTGAAHRLGREICLAFAAAGWNVLCHYRASQAGAQDTQAAVQALGRACLLVQADLAQP
QAGTQLLDQCVALTGQAPRCIVNNASIFEADDARTASAQGLVRHFLTNTATPLLLGNALSAWLRAQGRPA
TGGYSVVHVLDQKVHNLNPDYFSYTVSKLALERSVALQAQALAPHVRVCGLSPGLIYLSGPQTQDNFDRA
AQVNLLRKRIEPADVARCAVFIAGNASLNGCTLQADNGQHLVPLERDVMFAITENPRP
>gi|319761315|ref|YP_004125252.1| hypothetical protein Alide_0595 [Alicycliphilus denitrificans BC]
MTTPTDALFQHIRQDLAAAGGWIGFDRFMQLALYTPGLGYYAGGLRKLGSMPEDGSDFVTAPELSPVFGK
VLAAQVREALDATGTDEVWEFGAGSGALAGQLLEALGERVRRYTIVDLSGSLRARQQERLAAHAGRVHWA
ERLPAAIEGVVVGNELLDAMPVQLLHRVQGAWHERGVALDAGGALAWSDRPTALRPPVEIEGGHDYLTEI
HPQGEAFMRTLGERLARGAALLIDYGFGEDEYYHPQRHMGTVMCHRAHRADDDPLADVGEKDITAHVNFT
AMALAAQDAGLNVLGYTSQARFLLNCGLLQEMERLTLAQRALAAKLMLEHEMGELFKVLAVGPGEPWTPM
GFAQGDRTHRL
>gi|319761316|ref|YP_004125253.1| glyoxalase/bleomycin resistance protein/dioxygenase [Alicycliphilus denitrificans BC]
MSLKIDRFDHIVLNVADVQASADWYARVLGMEREEFASRTGPRVAMKFGRQKINLRPVGEDAVAWFTGVN
PTPGSDDLCFVTEQTADEVLAHFAAVGVVPEVGPVERTGALGPMTSVYCRDPDGNLIEVASYGG
>gi|319761317|ref|YP_004125254.1| hypothetical protein Alide_0597 [Alicycliphilus denitrificans BC]
MLRWVIVVFLALVLINGITPWLKRLGLGRLPGDFQFRLFGRDWFIPLTSTLLLSFLLSMLVKWL
>gi|319761318|ref|YP_004125255.1| rok family protein [Alicycliphilus denitrificans BC]
MLAGVDIGGTKVAVCLAVPSGAGGPPALLARLSEPTVKTGEADALARQVLRLLDAACAAQGLARGDVAAV
GVASCGPFVRRAGRVEVSNPNICGGLAGAPRGLGNGWTRVPLEAPLAQAMGEGRVQVANDAVAALAAERR
WGALRGVDDCAYVTWSTGIGVGLCVDGRVLRGKNGNAGHAGHSFVGDVAGEPPLCGCGNRGDVESLVAGN
ALPRRLGLQAPALLDAAARGDAAALAQVRGLCALMGRLLYNLVATLDLRRISIGGAVFLHHESLLLPLLR
AELARHFAVLTDGVELVRAGLGERVGDYAALALLDSSSA
>gi|319761319|ref|YP_004125256.1| alpha,alpha-trehalose-phosphate synthase (udp-forming) [Alicycliphilus denitrificans BC]
MSRLVVVSNRLADPRKPAAGGLAVALGDALARTGGLWFGSSGATAADLAPGEGRLRTRQAGKVLLASVDL
CAEDHAAYYQGYANSVLWPVFHYRLDLAQFDPAYLVGYRRVNQMFARKLLPLLRDDDLIWVHDYHLIPLA
AELRALGCRQRIGFFLHIPVPPPLVMAALPQHEWLMRSFFAYDLVGLQSEADADHLTRCMVTEAGAQELG
AQRLHAYGATVRVAAFPIGIDVEEFQALAAAPDAVGTFEALRAEYSRRQLLLGIDRLDYSKGIPQRVRAF
RQLLERYPENRNSATLVMIASPSRDDVHAYADLRQELEGLCGAINGDYGTLDWMPLRYIHRTVARRRVPG
LCRAARVGLVTPLRDGMNLVAKEYVVAQDEADPGVLVLSRFAGAAEQLEEALLVNPYDTQGMADAIQAAL
HMPLAERQWRHQRLLERIRRHDVHWWRQGFLQALEESSSASAA
>gi|319761320|ref|YP_004125257.1| trehalose-phosphatase [Alicycliphilus denitrificans BC]
MPMPPLPTANHALFLDFDGTLADIAAQPGAVRVQPGVMDSLRDLHAALGGALAIATGRTEADIDRFLHPL
RLPLACEHGALYRLGSSRAGGAHAIDLAAMLGALRPLVASHPELLVEVKSAGIALHYRQAPQLEALCLQV
LAQAMHRVSGAELMRGKCVLEVKPAGPSKGRAIADFMRQAPFAGRVPLFIGDDVTDEAGFAAVQSLGGLG
VKVGEGPTQARARLGTPGEVRDWLRAAARALAQPVPALAGE
>gi|319761321|ref|YP_004125258.1| thioredoxin [Alicycliphilus denitrificans BC]
MAPMTTEALHIVCPHCHTTNRVQAAQLGSAPDCGSCHRPLFTGEPLALDAATFDRHVGRSHVPVVVDFWA
PWCGPCRQMAPAFAQAARTLEPHVRLAKLDTEAHPQIAGRYGIRSIPTMILFKGGREAARVSGALGAADI
ARWVNSVG
>gi|319761322|ref|YP_004125259.1| polynucleotide adenylyltransferase region protein [Alicycliphilus denitrificans BC]
MQIYMVGGAVRDRLLGRPVNDHDWVVVGARPEDMVARGFVPVGRDFPVFLHPETHEEYALARTERKSGRG
YRGFVVQASPDVTLEEDLSRRDLTINAIAASADWIGADGLFDPYGGARDLERRVLRHVTDAFREDPVRIL
RVARFAARFTDFTVAPETMALMREMVQAGEADHLVAERVWQELSRGLMEEKPSRMFDVLRACGALAVVLP
EVERLWGVPQRAEHHPEVDTGVHLMMVLDMAARLSAPLAVRFACLTHDLGKGTTPADVLPRHIGHEQRSG
KLLKAVAERLRVPVDCRELADVVAREHGNIHRSGELGATALVRLLERCDAIRKPARLDDILLACECDARG
RLGFEDAPYPQRARLNAALAAVQSVATSVIAARAASMGVTGQKVGEIIHAARVQAVADWLATLAD
>gi|319761323|ref|YP_004125260.1| sigma-54 factor interaction domain-containing protein [Alicycliphilus denitrificans BC]
MDLIGEHASIVALRQLVLRVARSKASTVLIYGETGTGKGLVARMLHRHSERCEREFIDINCAAIPGDLLE
SELFGYERGAFTGAAGKKEGLIESANGGTVFLDEIRELDPVMQAKILTLLDTRRFRRLGSVHPISVDVRF
IAATNRILLSEVKDGKFRDDLYYRLQVIAINIPPLRERGDDIFILADRFLAKYNAVYGSTVRRLSPEVEQ
IFRAYQWPGNVRELENLLERICILEDGDCVEASHLPQRILREARAARPAAAGGGTPVQGYLEATAQFQRT
LIAQALARAQGHMGTAAERLALSRHALRHQMIKLGMASARDEADQAP
>gi|319761324|ref|YP_004125261.1| hypothetical protein Alide_0605 [Alicycliphilus denitrificans BC]
MQSLKIICPNGHLGFAPLRTESFHLGVQAGPDYIAADSGSDDVGPVPLGSDTSTSPEAWQRHDLEVMLLA
ARRIGVPMIIGSAGDTGSNSRVDLYVRIIRELAQKHGLKKFKLGYFYSEVDKELLRRKMRAGEAIQGLDG
FADLVESELDATDRIVGMAGVHPYMELLRRGADVIIGGRSSDAAVFAAPALHHGFPADYSYYLGKVLECA
SFCAEPYGGKETVMGEISHGDVKVTAMLPAQRCTIASVAGHAMYERSNPYDEFFAGGRLDMRHCHYEQFD
ERTTRITGSRFVPSEKIRVKLEGSGKVGERYVGLCGIRDPYTIAHVDRVIEWAREQVRARFGDGGYELHY
KVYGRDGVMGELEPLRNQPGHELCVMVQGVAPMREMAEEVTLIGLRQMFYARLPDVKGTAGSVSFPLDEV
LHASAAYRWTLNHTVAVDSGLELFPTHMTEAGA
>gi|319761325|ref|YP_004125262.1| hypothetical protein Alide_0606 [Alicycliphilus denitrificans BC]
MTTQKLSELAKTIRSKNAGVNKITFDIIFRDGATYERVKRSRVLTREGMAGLFRIPPERISDFVEYDPGY
AIKFTIYRLRPSGSAGDGDIFGAQQYAPLLDLPIPA
>gi|319761326|ref|YP_004125263.1| hypothetical protein Alide_0607 [Alicycliphilus denitrificans BC]
MRHWIASLGLLAGLLSAAAAPTHAQQAAVPRLVKIVVPFSAGASNDAIARAIAVPLARRLHTTVIVENKA
GAAGVIGADAVAKSPADGSVLLLTSSTFLTAAATQPRLPFDPVGAFAPVAMVAQGPLVLAVSGAAPFKSP
ADLVAAAQASPGTLTYGSAGVGSVGHLATELLGDAAHIKLLHVPYKGAANALADLAGGQIDVMIGNQSSM
AALMSGGKVRPLAVTSRQAHPAFPTLAPLAATVPGYAIDIWVGVFAPAGTPAALVERYNREINEIAASAE
LAAILNPDGAVPAGLTAEAFAARLRDELGMWKRLAARHRIVAE
>gi|319761327|ref|YP_004125264.1| metallophosphoesterase [Alicycliphilus denitrificans BC]
MRLHILSDLHLGVQGMEHPRTDADVVVLAGDIARPEQAVAWARGFGKPVLYVPGNHEFYGASLQQTARTL
RALCADGPVQLLNNRSLALRGVRFVGSTLWSDFRIAGEGQARADAMQEARRLVRDFQRIHTTEQPDAPLF
SPQDAAALYDANVQWLERELARPFDGPTVVITHHAPSPRSIHPRFAGSPLNAIFVSDAENLVAASGARLW
IHGHTHDSFDYLLHGTRVLCNPRGYGKDGMNENPLFDPALVAEVAA
>gi|319761328|ref|YP_004125265.1| glutathione s-transferase domain protein [Alicycliphilus denitrificans BC]
MLQLYIGNKNYSSWSMRPWVLLRQAGIAFEEVPVRFDSFDANSQFKRRLKAVSPTAKVPVLVDGGLTVWD
SLAIAEYLAETHPDKRLWPEDRAARAHARSVTAEMHSGFTALRGHCPMNIEARLPEVGAILWRDQAGVRA
DVQRLADMWGELLARHGGPMLFGHFTIADAFYAPVCMRLATYALPLPRPIADYVQRVRQLPGVKAWIDGA
LAEQDFLDFEEPYRARRG
>gi|319761329|ref|YP_004125266.1| 5-formyltetrahydrofolate cyclo-ligase [Alicycliphilus denitrificans BC]
MDKAALRRTLVAQRLDMPDRLRRADLLQRVMRIWLVDRPDTVIGAYWPIKGEFDPLPALHRWKEDGELLD
EPQRRRIGLPVVNKQHRTLTFHAWYPGCEMEEDAYGIPKPKDTEVIVPTLLFVPCVGYGPGGYRLGYGGG
FYDRTLATLQPRPFTVGLGFTQGYLDDFEPEAHDMPLDAILNDNGVVWPV
>gi|319761330|ref|YP_004125267.1| lytic transglycosylase catalytic [Alicycliphilus denitrificans BC]
MHWLKILTPLIAGAALAAAAPWAAAQNRGDDTLLEMQQAFRKGDKSRLTALLPTVRGHPLEPWAAYWELR
ARLDQAQSDQVNAFLQRFAGTYQEDRLRNDWLLLLGQRRDWDQFADLHPYYRMGDDREVRCYALAIDQIK
GTAAEDAGAEVLSNWYALRDLDDGCSNAAAEMLAARKIKPLDVWRKARLAAEANRLRMARKAVEIVAPDA
LAQLREALDSPTKYLTGRATARGKERQELVVLALVRMAMSDAGAAAGLLDSKWGVHLSAEERNWLWGLIG
KQAALSLSPDALAYFGNVGRDTDLNDDMLAWKVRAALRAGQWKLVGRSIDAMSARARQDSTWVYWKARSL
TAGRASEEDRAAARQLYERIAGTTGFYEQLALEELGARVTPAPAPAPLTDAEKAAARANPGLNRALYAIA
LGLRSEGVREWNYTTNLHQQGGMSERELLAAADLACERQVWDRCINTSERTRDVIDVAQRFPMPYQATVV
QLARGIGLDPAYVYGLIRQESRFIMDARSGVGASGLMQVMPATARWTARKIGLTGFTPQQINDRDTNITI
GTAYLKLALDDFDGSMPLAAAAYNAGPGRPRNWRNGPVLDAAIWAENVPFNETRDYVKKVLANTVNYAAI
LTGQPQSLKSRLGLVGPRDAREPEPNKDLP
>gi|319761331|ref|YP_004125268.1| cytochrome b561 [Alicycliphilus denitrificans BC]
MRVWDAPVRLLHWGMVAAVAVAWWSSDDTGPLHENMGYVVVALLAARLAWGFRGSHYARFAQFVRAPRAA
LAYARAALAGHAPRYIGHNPLGGWMVLALLADLGLLGFTGWLYTTDMFWGYGWLANLHKCLGWALLALIA
LHVAGMLWTSWQHRENLVRAMVTGAKAPPRGDDVV
>gi|319761332|ref|YP_004125269.1| hypothetical protein Alide_0613 [Alicycliphilus denitrificans BC]
MTTSWITRIAALALAASAGAAFAHGKVECKEYPKAEWRPHTELEKKLVQEGWTIRRMEKTDTCYEVYGKT
PDGKRVEAFFDPKTFERVED
>gi|319761333|ref|YP_004125270.1| 2og-fe(ii) oxygenase [Alicycliphilus denitrificans BC]
MLISIDQVLTKEQVRQFRQELDAANWDDGAATAGTLAKAVKRNQQIPDGSELAVRLGQQILHRLAQTPLF
ISAALPRTIYPPKFNRYAGGGTYGAHVDSALMYLPGSSQQMRTDLSATLFLAEPEEYEGGELEVEGPFGV
QTVKLSAGDMVLYPSTSLHRVTPVTNGARVASFFWIESLVADESERTLLFDLDQSIQQLTPLVAPDDMRL
VQLTGVYHNLLRRWAKP
>gi|319761334|ref|YP_004125271.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Alicycliphilus denitrificans BC]
MSPSDRIPPGVWNAIDYERLAPQAMDAGRHAYVAGGCGWDATVAANRAAFAGWAVLPRLLRDVRAGHTRL
QLAGMDLPHPLLLAPVAHQRLAHPDAEIATARAAQATGSCLVASTLSSCTLEDIAAASGPARWFQLYLQP
EREHSLDLLRRAEAAGYRAIVLTLDASIQLASRGALQAGFAMPADCVSANLARYPQPAPAQPAAGESRIF
QGAMRHAPRWDDLRWLLASTRLPVWIKGVLHPEDARELQAAGAAGLIVSNHGGRSLDGAPASLRMLPALR
TAVGAGYPLLLDGGVRSGQDAFKALALGADAVLVGRLQVYALAVAGALGVAHMLQMLVEELHACMAQAGC
ARLSDITHDTLTPSC
>gi|319761335|ref|YP_004125272.1| tonb-dependent receptor [Alicycliphilus denitrificans BC]
MPSFSSIKKPKNLRMAAALLPLSAMAQQAPAPLHTLPAVTVQEQAIDPNPNAEVGAPYKAKTSADTRHTR
PLAETPQTIQVVTKSAIDDSGATDLKQILAAQPGITLGTGENGNAFGDRYIIRGQEARSDVFVDGLRDPG
MTTRESFAIEQIEITKGPNSSFAGRGSAGGAINAITKQATLDYDFTRVSAGVGTDSHHRLTMDMNKAFSD
TFALRANALTAGEDVPDRSPSRRRRDGLALSGLWEVNSDLSVTLDYYGLRAKDKHPDLGGYLVGTVPNRR
PATGVPVYAQGNDFLQSDVDTATARINYRFAPNVRLTSLTRYGQSDNGYATTGASFNATAQRPAIDGGHT
GWQEVKYFAHQDNLRWDKEIGGLKHEFIFGFEYTNHRVKSGNYRVTSAGTPNCRTSATATSNNGFCMTDA
NGVLLPNLGDLAGRSYDRNAMSRDWHVKTFALSVMDTVDLTDRWTLFGGLRADHTDLSLSTYNAGTGAQT
ADYGYNDTLLNGHLGVSYKINPMGMVYASYGTAQDINGGESDVGTSAGYGGLVVDRFGNANAKPETSQNF
EIGTKWNLLDDKLLLTAAAFRTTKKDVMEAAPGNTGYDSAGMFNTGKNRVQGIEFGLAGNVTKQLQMQAG
MAFMKSKVLGSVNPANIGNPLSNFADRTFGVQGKYQLTRDFSLGAGARYESDRCGGQPDTGAGYANGMCS
QPVPSFTVYDLFASYRINKHADLRLNVLNATDKDYYTAVYRSGAFLYKGDGRAVRLTLNLDL
>gi|319761336|ref|YP_004125273.1| beta-lactamase domain-containing protein [Alicycliphilus denitrificans BC]
MPIESPALPPEITVFERGWLSANNVLFHGHGATVLVDSGYCAHAAQTVALVESGLQGRPLDRLLNTHLHS
DHCGGNAALQARWPRLITHIPPGQWDQVQAWDPVALSYEPTGQDCPRFRADGRLMPGSELTLGGSAWQVH
AAPGHDPHAVLLFEPRARVLISGDALWENGFGVVFPELDGAHAFADVGATLDLIEQLDPLTVIPGHGSVF
GGVPAAIARARRRLAGFEADPIKHARHAAKVLLKYKLLEWQQAPLAQVQAWLAATPYYARLHGRYFADRS
AVQWTAEMVQELVDGGAARREGEMLHNA
>gi|319761337|ref|YP_004125274.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MDRIWLRNYPPGVPHEVDADAYPSVAQMLEESFRRHADRPFSVCMDRWMRYGELDRLSARLGAWLQGQGL
EPGARVAIMLPNVPQFAVTMAAVLRAGYTCVNVNPLYTARELAHQLQDSGACAIVILENFAHTLAEVIED
TAVRHVVVASMGDLLGPWRGRWISFAVRHLAKMVPAYALPLSGGRQVLPFRRALALGARRRLNPPRVTPD
TPAFLQYTGGTTGLSKGAVLTQRNIIAATLQAEAWFGPALARVGDTRRINSIAALPLYHIFALTLCLLAI
RQGSHLTLIPNPRDIPKFVQVLKKRPFHLLPAVNTLFNALLQNAQFRRLDFSQLCVSQAGGMAASEATAG
QWKRLTGNTMIEGWGMSETCAIGTNNPVNSQAFNGSIGLPLPGIDIAIKDDAGASLPLGQPGEICIRGPN
VMPGYWNQPEENARAFTADGFMRTGDIGVMDAQGYTRIVDRKKDMILVSGFNVYPNELEQVVAQCPGVLE
CAAVGVTDDKQGEAIKVFVVRSDPALTENEVERHCHQHLTGYKRPKYIEFRDELPKTNVGKILRRELRAS
K
>gi|319761338|ref|YP_004125275.1| pgap1 family protein [Alicycliphilus denitrificans BC]
MTNARWQRWLVALHWLLMAAWVLGFWRRSPALALAGLAAVPLLSRLCMLPQFLLMAWVCRHDETPRPGPA
QLLRAWWAESRWAALVFGWWQPFRERAVADWLPPPGAGTPRGVVLVHGFLCNRAFWTPWFALLRARGHAF
VAVTLEPAFGSIDGYAPAIDAAVRRVAEATGRAPLVVGHSMGGLAIRAWLRAVPGADARVHRIVTLGTPH
HGTWPAAHARSTNGAQMRLHGPWVRQLRAQEPPGRAVLFVCWYSNGDNVAYPPAAAMLEGADNRFIAGVA
HVEMAFDPRVLRDCLALLEA
>gi|319761339|ref|YP_004125276.1| beta-ketoacyl synthase [Alicycliphilus denitrificans BC]
MSKRRVVITGAGIVSCIGNDLQTVESALREGKSGIKAVPKFTELGLRSQVAGVPEIDIEARIDRKQLRFM
GDAAAYAQIALEDAIAQAGLTPSQVSHPRTGLIMGSGGGSPANQIEAADTLREKGIRRVGPYQVTRCMSS
TVSACLATNFKVKGINYSITSACSTSAHCIGAAAQQIAWGMQDVMFAGGGEELSWGMALLFDGMGAMSAK
YNATPEKAARAYDANRDGFVIAGGGGAVVLESLEHAQARGATILAEVVGFGATSDGEDMVAPSGDGAIAC
MRQAMEGLDGPIDYINTHGTSTPVGDMQEVRAMQAVFGDAVPPFSSTKSLTGHSLGATGVQEAIYCLIML
NKGFIAGSVNVETPDPQLGGMPLVTQTRDADLTSVLSNSFGFGGTNASLVLRRWK
>gi|319761340|ref|YP_004125277.1| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase faba [Alicycliphilus denitrificans BC]
MADSFSYEQLIASGEGRLFTPDSGRLPLPPMLMFDRITHIDADGGAHGLGKIVAELDVKPDLWFFACHFQ
GDPVMPGCLGLDAMWQLIGFYLTWLRLPGRGRALGAGEVKFTGEVGPDVKLVTYEIDIKRVIKRKLNMAI
GDARLLADGKEIYVANDLRVGLFLREGD
>gi|319761341|ref|YP_004125278.1| apolipoprotein n-acyltransferase [Alicycliphilus denitrificans BC]
MAPPRLAGAPAPCRGPLSWLLALAAGLAQAASLAWPGPGGMKGQPLWWLQILSLALLARVLLAAGGARRG
ALLSWLFATAWLAGTFWWLFISMHTYGGLAAPLAVLAVLGLAVFLGSYYAAASALFWTLRPYNRSSAAIV
FAALWLLAELARGQWWTGFPWGAGGYAHTDGPLAVLARWLGVYGMGLAAALLAMGLAQWRRADLRRPRWW
AGAAVLVLAWACLAAQRHCAIEGCGAPAPQHAPLSLALLQGNIPQDEKFQPGSGVPMALQWYHDQLRAAD
AALVVAPETAIPLLPQQLAPGYLDAIAERYGKGAQALLLGIPLGSLEQGYTNSVLGFAPDGRRPYRYDKH
HLVPFGEFIPPFFRWFTDMMNIPLGDFDRGALDQPSLAWAGERIAPNICYEDLFGEELGARFRDPQSSPT
IMANLSNIGWFGDTVAIDQHLAISRLRALEFERPMVRATNTGATAVIDHRGRVSHRLPSYQRGVLHARVQ
GRDGAVTPYAWWVSRLGLAPLWALGLGVAAWAWLLRRKT
>gi|319761342|ref|YP_004125279.1| cbs domain containing protein [Alicycliphilus denitrificans BC]
MSDPYPARAPEKEDKRTFLQRLIEFLNPGPDSTAELIATLAEAEDNEVINADARVMLERVLRMAEMTTSD
VMVPAPRMDMLDIDAPLDELMAQVLRTAHSRFPVYQGERDNIIGILLAKDLLKLWRSPELNVRTLVRPAL
FVPESKGLHALEREFRSTRNHMAIVIDEFGRIAGLVTFEDVIEQIVGEIEDEFDIHEDEGDIFGLADHSY
RVSGDTPVERVAEAFGVALRGSDPDEEFDTIGGLIAHELGRVPRKGETVTLCGLRFVVLHTKGGLVRWFK
VTPAPADAAPDGSAR
>gi|319761343|ref|YP_004125280.1| gcn5-related n-acetyltransferase [Alicycliphilus denitrificans BC]
MLPTKNWLRACLDVGRRPHRGLAMNTVMVPVRTLGPRHRERIARHLLGLSERDRYLRFGYAATDEQVRRY
VDLLDFGRDEVFGIFNRRLELIAMAHVAFAESKDYQGCAEFGVSVLASARGRGYGARLFERSVMLARNRG
VRMMFIHALTENTAMLKIARNAGASVQHDGSESEAYLQLPPAGLDTRVSEIVAEQFGEVDYQLKKQARQF
WRLLADMQEIRQGVREGRHQAAE
>gi|319761344|ref|YP_004125281.1| transcription regulator asnc-type-like protein [Alicycliphilus denitrificans BC]
MSERTVALDKLDRAILRRLQDNGRETYDLIGAQVGLSPSAVLRRARRLEELGVIDRYVALVRPERVGLGL
TAYLNVRLEKHTESHKRNPMDLFRASVQTWPEVVECAALTGEMDYLLRVVVADMAHYSRFIMDTLLKHPS
VQDCKTSFVLDRVKATTALPV
>gi|319761345|ref|YP_004125282.1| 4-hydroxyphenylpyruvate dioxygenase [Alicycliphilus denitrificans BC]
MTAALPTQAARETTAWENPMGLMGFEFVEFTSPQPGLLEDVFEKLGFTLVARHRSKDVLLYRQNQINFIL
NREPHSQAAYFGAEHGPSACGLAFRVKDAHRAYKRALELGAQPIEIPTGPMELRLPAIKGIGGAPLYLID
RFEDGKSIYDIDFEWLEGVPQRPEGHGLKEIDHLTHNVYRGRMGFWANFYEKLFNFREIRYFDIQGEYTG
LTSKAMTAPDGRIRIPLNEEARQGGGQIEEFLMQFNGEGIQHIALVCDRLTDVVDRLGLAGVPLAPAPND
VYYEMLDKRLPGHGQDVAALQARGILLDGSTAGGQPRLLLQIFSTPMLGPVFFEFIQREGDEGFGEGNFK
ALFESLERDQVNRGVIDTRAKGG
>gi|319761346|ref|YP_004125283.1| phenylalanine-4-hydroxylase [Alicycliphilus denitrificans BC]
MAVQPAVYGASERPPRGDYTRARDDYTCAQDWAAYTAQDHDTYHRLYLRQSAQLPGLASEAFIAALPLLG
AKERIPRFDDVNERLYRATRWQLVAVPGLIPEVPFFRLLAARKFPVTDWIRRPEEFEYIVEPDVFHDLFG
HVPLLFNPVLADYMQRYGEGGLKAARLGACEMLARLYWYTIEFGLIREAAGLRAYGAGILSSHGELPYSV
RSPEPQRLPLSLERAMRTRYKIDSYQQTYFVIDGFEQLFDLTAQDFEPLYARLRGLPEFAAGAG
>gi|319761347|ref|YP_004125284.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Alicycliphilus denitrificans BC]
MTPHTALRLHVPEPTGRPGCSTDFSYLSISPAGAVRKPPIDTAPADTADLATSLVRVLDDDGKACGPWAP
AIHPERLRRGLRAMMKTRIFDARMLLAQRQKKLSFYMQCLGEEAIAVAHSMALQDGDMCFPTYRQQGLLL
ARDDISMVEMICQLMSNQRDPIKGRQLPVMYSYKRAGFFSISGNLATQVPQAVGWAMASAIKGDTKIASA
WIGDGSTAESDFHTALTFAHVYRAPVIINVVNNQWAISTFQAIAGGEGTTFAQRGVGVGIASLRVDGNDF
LAVYAASQWAAERARSNCGPTLIEWETYRAGPHSTSDDPSKYRPADDWQRFPLGDPIERLKKHLIAIGEW
SEARHEAAQKELEAEVIAAQKEAERHGSLLDGRVPSAATMFDDVYKDMPEHLRRQRQQLGV
>gi|319761348|ref|YP_004125285.1| transketolase central region protein [Alicycliphilus denitrificans BC]
MTMIQALRSGLDVMMGRDDNVVVYGEDVGYFGGVFRVTEGLQAKYGKTRCFDAPISESGIVGTAIGMAAY
GLKPVVEIQFADYVYPATDQIVSEAARLRHRSAGDFSAPMVIRMPCGGGIYGGQTHSQSPEAFFTHVCGL
RTVMPSNPYDAKGLLIASIECEDPVIFLEPKRLYNGPFDGHHDKPVVPWSRHELGKVPEGYFRVPLDKAA
VFRPGSAVTVLTYGTMVWVSEAAARETGVDAEIIDLRSIWPLDLETIVDSVKKTGRCVVVHEATRTSGFG
AELAALVQEHCFFHLEAPIERVTGWDTPYPHAQEWAYFPGPSRVGEALKRAVEA
>gi|319761349|ref|YP_004125286.1| catalytic domain-containing protein of components of various dehydrogenase complexes [Alicycliphilus denitrificans BC]
MGIYVIRVPDIGEGIAEVELVSWHVQPGDSVTEDQHLADVMTDKATVEVPSPMHGRVLSLGGSPGQVMAV
GAELVRLEVDGEGNTSESAVHKAPEATHSVAQAAAPTPAAPAPAAAVDAPRAAPAPAPVRNGAAPRAPAA
VRKEGERPLASPAVRRRALDLGVDLRRVHGSGPAGRIEHHDLDAWAAGGGQAQAGGGSQYVERHGEEQVP
VIGLRRKIAQKMQEAKRRIPHFSYVEEVDVTELEQLRQRLNQIHGAARGKLTLLPFLARAMVLALRDFPQ
INARYDDEAGQVTRYEAVHLGVATQTDTGLMVPVLRHAEALDLWACAAGIARVAEAARTGRAPREELSGS
TITITSLGALGGIASTPVINHPEVAIVGVNRMVERPMLRGGQVVARQLMNLSSSFDHRVVDGMDAARFIQ
AVRALLETPALLFVE
>gi|319761350|ref|YP_004125287.1| dihydrolipoamide dehydrogenase [Alicycliphilus denitrificans BC]
MTKEITTKLLVIGGGPGGYVAAIRAGQLGIPTVLAEGASLGGTCLNIGCIPSKAIIHAAEEFERARHQAA
GSALGIRVSDPQIDIAQTVRWKDGIVARLTGGVGTLLRKAGVQVLKGWAQIEDGKTATVQLQGGESVRVR
CEHLLLATGSEPVELPSMPFGGPIWSSTDALSPDVLPKRLVVVGAGYIGLELGIAYRKLGVEVTVVEAAQ
RVLPSYDEELTEPVLQALQKQGVVLHLGCSVAGWDARHGVHVRNARADEFALPAERVLVAVGRRPRTAGF
GLESLQLDMAGRHVAIDAHCRTSMRGVWAIGDVTGEPMLAHRAMAQGECVAEQIAGRNRRFEPMAIPAVC
FTDPEVVVVGRTPGEARAAGLDCIDAAFPFAANGRAMTLESTGGFVRVVARRDNHLILGWQAVGHGVAEL
AAAFGQSIEMGARLEDVGHTIHAHPTMGEAVQEAALRALGQALHI
>gi|319761351|ref|YP_004125288.1| glycyl-tRNA synthetase, alpha subunit [Alicycliphilus denitrificans BC]
MLTFQQIILKLQSYWADQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWKAAYVQPSRRPKDGRYGDNPN
RLQHYYQYQVVLKPAPANILELYLGSLEALGFDLKKNDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQF
TYFQQVGGIDCKPATGEITYGLERLAMYLQGVDNVYNLTWTEGLSYGDVYHQNEVEQSTYNFEHSDADFL
FTAFGAHEKQAQHLMAEQLALPAYEQVLKAAHTFNLLDARGAISVTERAAYIGRIRNLARAVARSYLDSR
ARLGFPMAARAHADEVLAELAKVAEQQSKKAA
>gi|319761352|ref|YP_004125289.1| glycyl-tRNA synthetase, beta subunit [Alicycliphilus denitrificans BC]
MTATSNLLVELFVEELPPKALQKLGDAFAGVLRDQLVAQGLAAAGAPLTAYASPRRLAAHIEGVLAQAPD
KAVSQKLMPVAVGLAADGQPTPALLKKLSALGADASAVAGLKRVHDGKAEVLYYESTAQGATLAQGLQKA
LDEAIARLPIPKVMRYQLEDGWTSVHFVRPAHGLVALHGAGVVPVAVLGLAAGNATQGHRFEAAVQPVVL
RDADSYAEQLRAQGAVIAGFAERRAEIVRQLRAAAEKLGGGVRPIEDDALLDEVTALVERPNVLVCQFER
EFLAVPQECLILTMKANQKYFPLLDAEGRLTHRFLVVSNISPQDAGAVIQGNERVVRPRLADAKFFFDQD
RKKTLASRVAQLSKVVYHNQLGSQGERVERVRAIAKAIGQQLFAALAERHELQGTQDGEIAQDWLLTCVD
NAALLAKTDLVTDMVGEFPELQGIMGGYYAVNDGLPDEVAHAIEDHYKPRFAGDELPRESVGLVVALADK
IETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLMEKDLPLDLGALLAGAVPAFAGRIDDPSALLADFIY
DRLAGALREQGYSSQEVDAVLALRPQRLALVEKQLAAVRAFSALPESQALAAANKRVSNILKKAGGDVHA
HVNPELLREQAEQDLYAALQRFVPEADAQFERGDYTASLQTLAVLRAPVDAFFDDVMVNAEQLDLRLNRL
GLLKTLHEAMNRVADLSRLAA
>gi|319761353|ref|YP_004125290.1| histidinol-phosphate phosphatase family protein [Alicycliphilus denitrificans BC]
MKLAILDRDGTLNALGDGFIASPDDWVPLPGALEAVARLNHAGWHVVLATNQPGLGRGLFDAQTLVDIHA
KMHRQLAALGGRIDAVFYCPHAEGEACNCRKPAPGLMEQICERYGVEGDEILVAGSCLAHLQAAADLGAQ
LHMVCTGRSAHLDPRQPLPPGWPPGTRAHASLGALVDFVAPQDGAALPVVA
>gi|319761354|ref|YP_004125291.1| phospholipid/glycerol acyltransferase [Alicycliphilus denitrificans BC]
MALIRSLVHLLVMAVTVIPYTLAILLVRVLGGSPAARYRVARAWLALCVDSARWLLGIRTHIMGMEHLPQ
DPKQGVVLLVKHQSTYETFLMPAIMPHPLAYVFKKELLRIPFFGWSIGSLDMIHIDRKHGSRAFHKVVEQ
GKRLLAQGTWVIMFPEGTRVARGQAGEYKSGATRLAIMAGVPVVPIAVTSARCWPRKALVKHPGVVEVSI
GKPIPTTGRKHEELMAEVETWIESEMRRLDPEAYPAA
>gi|319761355|ref|YP_004125292.1| hypothetical protein Alide_0636 [Alicycliphilus denitrificans BC]
MRPFVQLALDLLGGGVPAAPAHAPRAPDTKRQLRLGDAVVPYTLQRARRRSIGFTVGPDGLAVRAPAWVT
LAAVDAALQDKAGWILRKLGEQQARRRQQEAARIAWGPGAVLPYLGEPLTVVLAHGRAARGGMLVQDARE
LHLPLAHGAGPGQVRDAVQAWLMRDARRCFTERLDHFAPLLGVRWTQLRLSSARTRWGSARTGGSISLNW
RLMHYRPAIIDYVVAHELSHLRVMDHSPRFWSVVESVVPDHAALRRSLRELPAPPWD
>gi|319761356|ref|YP_004125293.1| rhodanese domain protein [Alicycliphilus denitrificans BC]
MSTHTVSPTDQPLPAEGYAGDVSPQLAWQWVRAGHAVLVDVRSDAERDWVGFVPGAVAVAWKQWPGMVPN
PDFDAQIRAAVPPGARAVLLCRSGVRSVDAARRATALGITAYNVLEGFEGSLDENGQRNHRGGWRFRGLP
WRQG
>gi|319761357|ref|YP_004125294.1| peptidoglycan-binding lysin domain protein [Alicycliphilus denitrificans BC]
MGLFTFIKEAGEKLFGGSPAQAASAAAPTQAELNARAGKAIETYIATQNLGVSGLQVAFEGPEGKVTVTG
TAPTQAAKEKVTLCCGNVASVTSVDNQMTVANPEPEAQYHDVVRGDTLSAIAKKFYGDASKYPVIFEANK
PMLSHPDKIYPGQKLRIPPLPR
>gi|319761358|ref|YP_004125295.1| transcriptional activator, baf family [Alicycliphilus denitrificans BC]
MTFLAIDVGNSRLKWALYDAARPGTAMLAHGVEFLDHIERLSEGPWAGLPAPTHMLGCVVAGDAIKRRVV
EQMELWDVPAHWVVPSQEEAGVVNGYDYPTRLGADRWVAMIGARHRLLAQGPARPLILAMVGTAVTVEAL
DTSGRFLGGLIVPGHGIMLRALESGTAGLHVPTGEVRLFPSNTSDALTSGGTYAIAGAVERMYQHLLQHC
GQEPVCMMTGGAGWKMAPSMTRPFELVENLIFDGLLEIASRRLAAAAA
>gi|319761359|ref|YP_004125296.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MARKAPRRTAERILEASLALFNRFGEPHVSTASIAAELGISSGNLYYHYRAKDEIVNALFAQYDEALGGL
LQAGGDAADVEDAWFFMHRLFELLWQYRFLYRDLNNLLSRNRLLETQFPGVLQAKVAAMRALLAAMRRGG
ALRMDHEDDLQATATCMVVVLTYWLCFEYVGDPRRALEPESAQAALLRGARHVLGLLMPYLEPEQRAHLA
RLVQAYETSDGAGEG
>gi|319761360|ref|YP_004125297.1| poly(hydroxyalkanoate) granule-associated protein [Alicycliphilus denitrificans BC]
MPRPPRDDDAPNPAHELPRMARESAQQIWLAGLGAFAKAQEEGGKVFEALVREGLALQRKTQSAAEEHLG
EAAQRMSHLASDLGERAAGQWDRLEGIFEQRVAKALQRLGMPTAQDMQALQERVHALEEELRRLQGRRKA
DAADDED
>gi|319761361|ref|YP_004125298.1| dtdp-glucose 4,6-dehydratase [Alicycliphilus denitrificans BC]
MILVTGGAGFIGANFVLDWLAGSDEPVVNLDKLTYAGNLHNLDGLSGDARHLFVQGDIGDGALVSRLLAG
HRPRAIVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEVVRHYWQALSATEKEAFRFLHVSTDEVYGTLA
PSAPAFTEAHGYEPNSPYSASKAASDHLVRAWHHTYGLPVLTTNCSNNYGPLHFPEKLIPLMIVNALAGK
SLPVYGDGMQVRDWLYVKDHCSAIRRVLEAGRLGETYNVGGWNEKPNIEIVKTVCALLDELRPRADGQSY
ATQITYVQDRPGHDRRYAIDARKIERELAWRPAETFETGIRKTVQWYLDNPQWVQQVQSGAYRDWVAKQY
ASA
>gi|319761362|ref|YP_004125299.1| dtdp-4-dehydrorhamnose reductase [Alicycliphilus denitrificans BC]
MNILLLGKNGQVGWELQRSLAVLGEVTALGHDEADFTQPQAVAQAVRALCPDVIVNAAAHTAVDKAESEP
ERARLLNATTPGVLAEEAVRLGAWLVHYSTDYVFDGSGSRPWRETDAPAPLSVYGATKLEGERLIQQSGC
RHLILRTSWVYAARGGNFAKTMLRLAQERERLTVIDDQWGAPTGADLLADVTAHAIRHLQQRPQDGGLYH
CVAGGETTWHSYAKYVVEHARQAQSAINIIAKEIAPVPTSAFLTPARRPHNSRLDNAKLQAAFGLRLPPW
QQGVARMLTEIL
>gi|319761363|ref|YP_004125300.1| glucose-1-phosphate thymidylyltransferase [Alicycliphilus denitrificans BC]
MTAPTRKGIILAGGSGTRLHPATLAISKQLLPVYDKPMVYYPLSTLMLAGIRDILLISTPQDTPRFEQLL
GDGGQWGVNLQYAVQPSPDGLAQAFLIGERFLAGSPSALVLGDNIFYGHDLQPLLQTANARTSGATVFAY
HVQDPERYGVVAFDAAGKATSIEEKPQAPQSNYAVTGLYFYDGQVVDIAKAVKPSARGELEITSVNQAYL
EQGRLTVQTMGRGYAWLDTGTHESLLDASQFIATLENRQGLKVACPEEIAWRSGWIDAAQLEKLAQPLAK
NRYGQYLLQLLRHKVF
>gi|319761364|ref|YP_004125301.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Alicycliphilus denitrificans BC]
MKATPLAIPDVVLIEPKVFGDARGFFFESFNQKAFDEATGTHFQFVQDNHSRSGRGVLRGLHYQVQQPQG
KLVRVVRGAVWDVAVDIRRNSPTFGRWVGAELSEDNQRQLWVPPGFAHGFVVLSESADFLYKTTDYYAPQ
HERCIAWNDAQLAIAWPYAGEPVLSAKDQAGKPLAEAELCM
>gi|319761365|ref|YP_004125302.1| hypothetical protein Alide_0646 [Alicycliphilus denitrificans BC]
MHVSAAPAAGGQAGRALRVALLGTRGIPAGYGGFETFAQQLAVRLVRRGHQVTVYAEADRQGLPDTWYEG
VRIRHVQRPRWGAASVIGYDCRCLRDARQGYDLLYMLGYGAAWACWWNRRILGQKVWLNVDGLEWARSKW
GHLARVYLRAMEWVSSRAPTRVLADAQAIADRYARLYPRGVPCSFIAYGAELPAVSSRAAHDLSRWNLRT
GEYVLVVARPEPENHVLEIVEGHARWGGDWPLVVVGDVRPVTPYQKRLLALAGDKVRFIGGVYDAGLLTG
LRMGAGCHVHGHSVGGTNPSLLEALACGNVVVAHDNPFNREVARDAAHYFQTSQQLAEALERVRALTASA
RQAVAARARGIVAQHYTWDSIAAQYENLMHAECAGIAAGALHR
>gi|319761366|ref|YP_004125303.1| rhamnosyltransferase [Alicycliphilus denitrificans BC]
MSAASCVHAVVVSYRSDPQRLARQFDRLLEQVSAIVWVDNASGDGLRALASRWPAERLHAIWLGDNQGIG
AAQNRGMERALALGASHVLLMDDDSLPAPDMVPRLLAALAAHPQAAAVGACHVDPRRETGRTPFSVVAGG
RLRWLECSDARQVWEVDHVIASGCLIPAPVLQAVGGMREDFFIDWVDTEWCLRARDGGYRIYGVCAALLE
HTLGDRVVRVLGREIPWHAPWRHYYQARNFVLMLRSRQMGHVSKSHMTFRQLKRFIVFSTLVPGRWQYFK
MWLRGLLHGCQGRSGLVVPPGSR
>gi|319761367|ref|YP_004125304.1| type ii secretion system protein e [Alicycliphilus denitrificans BC]
MNNDDMNAQEPRQKLGEILLAGQKLSRNDLERALEVQRSMGGRLGRLLLSLGLVSEADVCAALAYQAGLP
LVRQEAFPQDRPELGQLNTSFLLSNHVLPLGPVDGQAPLPDFVAADPQDPAMQAALRLVFGQVPGLAFGL
ESEVAARLQQWFVQDELPPEEQEGQAYGASEFIEHLRDMASEAPIIQRVNQILAQAVSAKASDIHIETYE
EKSVVRIRVDGEIFPIDDIDNKDAPAIVSRIKILSQLDIAERRMPQDGRTKIRVHGKEMDVRVSTVPTAF
GESVVMRLLEKNFDLLSLQSLHFTPPTLAAMRQLLAVPHGILLVTGPTGSGKSTTLYASMQELEGQNLKI
LTVEDPVEYRLPWLNQVQVQPQIGLTFAQVLRAFLRQDPDVIMIGEMRDGETAEIAVQAALTGHLVLSTL
HTNSAMGAIVRLINMGVEPYLITASVVGVLAQRLVRQLCGDCKQPLSAEQARAAAASLGVAPTGEATLYK
PVGCASCRNTGYRGRVAIHELLRLTDEVKQQVLERGTAVHGAQGAYVGGNLLQDGATKVFSGLTTAEEVL
RVARQHD
>gi|319761368|ref|YP_004125305.1| type ii secretion system f domain protein [Alicycliphilus denitrificans BC]
MIEFHYAGTLADGKPCQGSIRASDAQAARLRLLGQGITPVRLQGGEAAASPGGAGERPAVRLKRSDVLLF
TREMAHLKQANMPLDKALVMLRETAGNERIKVFLANVQEEVRGGKSLYQSLQPFERDLGRQYLVLIRAGE
ASGSLHTILQELTTQLEADDKLRNYIISSMTYPAILLVVAVLSVILLLAFVVPQFRQIFDSMGDALPYST
QLVLQASDFVRGHWMALLLGLAVTVLLLSRWADTATGRRRIDAAVLSLPLMGKVLRNLQFALYFRTFGVL
LQRGVPLVDALRIAIDTLTNQALRQDMEPLVAVVKTGQRLSSGLDSPHFAGTSTPQLIRVAEETGQLGST
VLSLAARYEDEGRRTMGRVLATMEPLIIIVLGALVAFIIVAILGGVLSINDTI
>gi|319761369|ref|YP_004125306.1| general secretion pathway protein g [Alicycliphilus denitrificans BC]
MHFATTLRTPLQARRARGFTLIELLVVLVILTLLAGLVGPRVLDQLGGAKAKTARVQIGEMEQAVDLFKL
DVGRYPNDAEGLRALVERPATVQGWNGPYLKKGLPVDPWGAAYQYKFPGRHGGPDIFSLGADGKPGGESD
NADIYN
>gi|319761370|ref|YP_004125307.1| general secretion pathway protein h [Alicycliphilus denitrificans BC]
MRLRTPRPWGRHRGFTLLELLVVLVLAGIAVAVVGGSAQAYMERARYHQTVRDLASQLGRARALCVQQGR
QIVVFYAPQNRQLSIDGQVVLDIPASLAVRWEGLAQAPQQQNAAGQPVFVFNAEGGARGGQIQVSRGAQG
VLFSVNWLLGTVQQTVVAVP
>gi|319761371|ref|YP_004125308.1| hypothetical protein Alide_0652 [Alicycliphilus denitrificans BC]
MNTRRARGLRGFSLLEALVAMAIASIAFAVLYRTVGQSSLNATTVESRAEAALVARSVLASATFAEDLVQ
HPEGQSGPWQWSVQVQPEQVAVHAPGARQAPPPLQAARVELTIARDGRAVLAWTSWKPYRAAP
>gi|319761372|ref|YP_004125309.1| hypothetical protein Alide_0653 [Alicycliphilus denitrificans BC]
MTRPTPSRQRGFTLLELLIALAVTTAVVGLVFAGFGVIGRSQERSQQLVDRSERMLQVGQWLGRKFDTLR
LLSHGQDGRFVLFFSGSAAGALWVSPLPERGDAGGLYVLRASPLRHDDGRVDLAIEALPYDGALMALDWA
RAEREILLPDVRTLQWYYQDGATGQWLQQWDAGRAGYPVRIRLALGDARGDWPELVFALARAQ
>gi|319761373|ref|YP_004125310.1| hypothetical protein Alide_0654 [Alicycliphilus denitrificans BC]
MKRCASAQRGAALVLVLWLVAALSLTVLAGARGIRQQTQRAAFDLERLRIEPVLDAARQLAVQSLLKEGG
QARGYRAWQLQLGPYGVELEIIPSGGLVDVNVASDALLLALLQKVGGLTPGEAAIMASRIRDYIDPDDQP
GGIGGAEAPQYRAAGWPVLPRNGPVDDLSELRMVLGMSPELYEIISPYLGINGQQRIEIDAAPPALIDAL
TDQPGLGAQIQSSPPEMRAGALLSGAAAQIFATARAGGGTVKVRAMVQTDQGHWWQREAWVDLSTRPDSL
TPWTTLSLEPTRRMNPPPQEIHP
>gi|319761374|ref|YP_004125311.1| fimbrial assembly family protein [Alicycliphilus denitrificans BC]
MTAREQFNRRLEAVFDRLAWGFGDARRMLVERGLWPAAAPVLAAPDGARFCVAATRLRPAGGKRRPQGLL
VPEGDSLWGSLQLPDMPRRQLGPAVQEALWRVSPLPPDQIWCAWRATPQAQGGWSVEWGACRRDQQGAAL
SHLGLPADASLYLARAGHALPVHGAGWPAQQRRQRWLDALALLGVLLLAAALAVPALMPLALKRQAVVRA
VEHVNELEPKAAPLRPQLDELRQQASVAESLRQAAASADLPLASVIEALSEALPDDSWLERVEISGNDIR
ITGVAGNAGDLAARLGRHGGFVEVRASAASVRDNALGKERFTFEMRWRPPQAEGGKP
>gi|319761375|ref|YP_004125312.1| general secretion pathway protein m [Alicycliphilus denitrificans BC]
MNVWTRRALVTALLCVLALLAGAGLAYNALWSRYDSGLSLLESRSERIDGLVGAGPDIASRLESARQTVA
PWLHPAGENAANDAQQRLRELINASGNTLVSSQVALEPGAEGRLASVRLTATLTGDWPRLVRFMQDLQAR
TPPFWVRSASLAREGANTSGAAQTARLTLQLAAPLAPEKGQP
>gi|319761376|ref|YP_004125313.1| hypothetical protein Alide_0657 [Alicycliphilus denitrificans BC]
MIRPWHFTPLLAGAALAAGAYWWLAEKDLWQPPPARTPELPQLAPLQQPVRSTVREALARPPLWALRRPV
EADGKKGGMEQEINQSRLTAVFESGRQRIALLQRPDGSPLKLTSDTKPWRLESFDGRKALFVSEDGAQRV
ERPLEAGSGAPKRARTAAGRP
>gi|319761377|ref|YP_004125314.1| general secretion pathway protein d [Alicycliphilus denitrificans BC]
MVSQGQGDQADNADQTGKPEPASQAKAASTGTKLYPGNDQLFKRDLAPPKDPVLARGDRVSLNFENVSVA
GLAQALLGDLLKLNYTVDAGGDTVVSLRTSQPLLRSQVLDVLDTVLLPHDLAIVRDNVGVYHVTKRAVTV
GARPVVGASKFKDLAGSGTVIVPLNHIAAAEMAKILAPLAPREAIVYVDSLRNLLVLQGSKAQLAGWLEM
VEAFDVDFLAGMSLGVFVLENANVNVVRDALQAMLGAGGDKAADPYGGSAGAASAPASGAAGATTGGGSP
GAGAQAAAAGSPASGAGPLNGLIRVFPVERLNALVVVTPRSHLLPQVESWIRRLDRPTDTLEPHLFVYPV
QNGSAVHLAEMLNGLFGGGGAAAARPGVAAGSAPAQFAAATSAQGTQPSMATSMTSTASTGMAQTGGLTG
SGLGASQGTLARPGGAAATGPQLSTVSQLEGNVRVVADDKRNALLIRAPRAEYRRIEQALRELDKAPTQV
LIEASIVEVSLTGNLKYGVEWFIQNSLSGDRTGQALLNMNNSGSIGPQQPGFSYTILNKAGAVRATLNAL
AANSQLRVLSNPSVLVLDNHSATILVGKQQPIKQSTTVTTGNLVTESIVYKDTGVMLSVTPSVNAGGLVT
LDINQQVTDVGDVDAATGQRSFLTRQIQSRVAVRSGDPIVLGGVMSENQSTGNSGVPGLRDVPVLGALFS
TDTTTSARTELLVVLTPRALEDDDALRAASAEMRDRMRTMSLQGLLVPASAAKPPEGGAPLKPESPQ
>gi|319761378|ref|YP_004125315.1| hypothetical protein Alide_0659 [Alicycliphilus denitrificans BC]
MKTQSLHRRRLLQALLLPAAVALAGCASTPSPQADREALLQRAREYWELSRRNDTLNAWKYEAASRDQSM
TLEGYVKRGGIVYDSVEVLGVRSLQGDEARVDVRMRYGVPLLRLKNMEADAQDQWRRIDGIWYHVLPRSS
VFPGEKR
>gi|319761379|ref|YP_004125316.1| hypothetical protein Alide_0660 [Alicycliphilus denitrificans BC]
MKKFAMAAVAAAAMTVGVAHAYTAGTFSNGVVVPNVIHNGLADTTAVGLVNQSGATKAVFWTFFDQNSKH
VTDGCFTMTDKDYQPFVWANESGVGLEGQRGYLVFSVGGATCADSAPGTGAIAAHAFQVTTASKDVAYTP
VIDGPLTIAGGDLTTLGAASLTAVGGAAPVGDVLNMRYYLQDGAKTNIVVWSTGDQKGSHTVNIYDDKQG
RKSVNFDLAKEELDWFDPSTISGRPASYVDGFIEWNTANAATTLAGSVFSYSVIDAPAFGAVQTVLGFHK
AP
>gi|319761380|ref|YP_004125317.1| hypothetical protein Alide_0661 [Alicycliphilus denitrificans BC]
MKQLRVWPGRLAGVAAVLLALGCQMAPVVPAPGVARAAPKGVAPQTIHLDLPDAWGGQVLCVASDCLLGA
VEHENNKLSLLRLKGRTATLLDRQSVAYHPDSAAWLSPQLLVAAVENSLSLDIFRVSDGRLARLAQVKVG
FEPRDVIALPAPPGQYRMLATPYGGREVAWVDWSEQQSQAAQVRKTTWCQTPWHPTRVSQLPQSAQGGVA
VACLDDKKVVAVSEADLYDAPKVLASFTVIPRQVRPSPSGLWLYVALETGGRNARIQMQTGELQWIAGDP
RGSSAVALLADDLVIWGDDQRLTLQRLDETGGVLQTRELRTSGYSTSLQLQDIDGDGHQDILVLNSAGKR
ADVIYGPLWEQAQPRP
>gi|319761381|ref|YP_004125318.1| hypothetical protein Alide_0662 [Alicycliphilus denitrificans BC]
MTSIRSIIPGIVLLAGAMVLGAAFAQEAKNPVLARLGNGETITEKDLTQYVGRRIDLKAVARNASGVTTV
VQEMALARALALEGQSLGVPPRSEKGDTRFDDIYAHTIFSKISPACEAPKDEAAARDFYDKNPKAFTLPT
AIRLSRVILPAAEKVDGEPAGTWLMNQVQAIGAGRQKFEDAAHRAEQAYKLDAQGDLGWVMLNEENLILR
ALGDANQGDIVGPVKDGDFVYLFQVAEKRPSQVVPWTEVSAVAAKRAVSYCREQARIDVQQRMFQKYGVQ
LDENAVRSLFEAK
>gi|319761382|ref|YP_004125319.1| methyltransferase type 11 [Alicycliphilus denitrificans BC]
MHPSAMNNGKLFFDIYATKLAQGVVVDIGAQDVNGSLRSVCPPHLKFIGVDFVQGRGVDVVLDDPYRLPF
EDASVDVVVSSSCFEHSELFWVLFLEIMRVLKSPGLFYLNAPSNGTFHRYPVDCWRFYPDSGRALVTWAQ
RNGVDTCVLESYVSRQDAAVWSDFVAVFLKGSEHAGLFPARITQVFKDFYNGQVLGDSKFMNPQEYPEDL
QRLYAAEQQASQA
>gi|319761383|ref|YP_004125320.1| glycosyl transferase family 2 [Alicycliphilus denitrificans BC]
MMVPRASVLIPVKNGGALLGEVLDAVLAQSTPWPFEVVVVDSGSRDGSVECARQRGVRVELIPAAEFGHG
RTRNYLASLSRGDFLVFITQDARPADAHWLRHLVEGCDSAPDVAGAFGPHRAHPGARHVTERELAEHFAG
FGSVLSRVQLEDRERFDREVGYRQWLHFFSNNNSCLRRSVWEKLPFPDVMFAEDQTWMLSAIKAGYAKAF
VPEAAVYHSHDFGVWETLQRNFDEASSFQRDFGYDMQRSLARALASAVLLARRDARWLRQAGVRGWSWLK
HSAYMAGIELARTSGQFLGTRHQSLPAWLLRVISRDQALQRGRAA
>gi|319761384|ref|YP_004125321.1| glycosyl transferase group 1 [Alicycliphilus denitrificans BC]
MVRQRLKHGPGGPLKSRNVFTHYDFVRVARVQLAPQPARANTLLWFIPDFNIGSGGHQTIFRTIWHLERM
GWESSIVIVSPTVHATAESARHDICEHFFPLQARVFIGFDGLPSSEFVIATGWQTAYPVRAVAGPVKKLY
FVQDFEPSFYPTGTESVLADNTYHFGFFGITAGGWLARKLRAEYGMLTHPISFGVDHDLYRQRPRREPHI
KRVFFYARPPTPRRAFEFGLLVLEAVSRRLPDTQFILAGWDVSDYHIPFPHLAAGVISPEELADVFSQCD
AALVLSLTNLSLMPLEVMAAGCAVVSNRGDCVEWLLNDDVALLTDPTLEALSDALCHLLQDDAARQALCR
RAQEFARHQHWKASAEAFEQGLLEARKLLSVVAEEAV
>gi|319761385|ref|YP_004125322.1| abc-2 type transporter [Alicycliphilus denitrificans BC]
MGVSVNRPGALQQASSGRAQHAWVLWRYWMLREFKTRYAGSVLGLSWAFVQPLATLAIFYVLFGMVLAVR
VPGLDLANGYLLHLLAGLAVWLPFTDAIGRGVGCLAAYEDFLRKQPMPAEILPAVAVGGSLLVMAIGYAL
FLVLSLTQGAPLRATWAWLPLLVLAQVALTFGLTLLLSMAHFLWRDVGSIVAFALQLWFYLTPVVYPLAQ
VPERFHVWYLLNPVACLVLAVEWAALGMAMPGGTLWALLAWTLLLGGGGWWFFRSMKAALGEAL
>gi|319761386|ref|YP_004125323.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MAIAFKNIEKHYAVYARPQDRLWEWVTGRQRHRVHVALAGIDFEVRPGETFGLIGENGAGKSTLLKIAAG
TIRPTRGEVMRQGRVAALLELGAGFHPEESGQDNIRFMAALHGLEGEALEDFAARATEFSELSAETLQRP
VKTYSSGMFMRLAFAAATAIEPEVLIVDEALSVGDLHFQKKSLNRILELRERGATVLFCSHNLYQVRSLC
QRAAWIHGGRIEAIGHTEDVVTAYEAHERRRYAHLRTDAPDAAVAPTQTAAAPPAHASVPVKIMRVGIET
ADGINPAQVDSFQDLTLEIEVESYGDAPFHVGFAIVRPDKDNVFGSSTQFLGSRPPMRGVGQHRVRVRFP
RLPLLSGEYLWSVYTLDDSGLQVLDMAELIQPFTVLNQKHREFGLVWLEHEWLQVQ
>gi|319761387|ref|YP_004125324.1| hypothetical protein Alide_0668 [Alicycliphilus denitrificans BC]
MAAGAMSRDWRLDWAFPALGRLPTTLPWRLVHWLGRDAPAVRRATELFLQQRFSQVFLGATGEQHRQWAR
AHLDMLATEMLDAAALHRLGEPGGPSITLQGWGHVQTLQQRGQGFILVLNHYDRLLTAVIALGRRGVALN
ILTMPVVDNPGLGEAQRAFLVRKIAATTRITGGQWRTSSEPLRPVHEGLRKGQGWVILADAWSPDFARMR
DHAFLGGYLRLPTGIERLAESTGAALLHACTRSLAPDRLEVAVEALSGSPQAAIDAVIQRLDRDVRERPW
AWWHWGLWDQMWRPAAQEGESNV
>gi|319761388|ref|YP_004125325.1| methyltransferase type 11 [Alicycliphilus denitrificans BC]
MSDIERYDYAFDPEGDAWAARLLRRVPGRASVLELGPGPGAMTQVLRARGQAVTVVENDPAALQALRPLG
VQAVEADLDGLAWLDALQGRRFGAILACDVLEHLRSPEQVLEELAGLLEPMGSLIISLPNIAYAGVVAAL
RAGVFDYADKGLLDRTHLRFFTRRSIEQLLMDCGWVPLAWEANRVPVAQSEFAWHWEAIPDAWRQHLLTG
WTDFDVYQWMVVAAPARDSRDWEMVQVRAEASQLRAQLQALQLTHATEHASLLEHQKAFGEARQLIAQFE
QERDSLRQQVQQLATDKAALEQACQDAQETSAQERAAIGGSSWRARLARRLGVD
>gi|319761389|ref|YP_004125326.1| lytic transglycosylase catalytic [Alicycliphilus denitrificans BC]
MRKVRAACTLVLLAGAWVAAAQAQTVWQFVDRDGVTHMGNVPPPAPRGVIWIEGVGSATPAGQSKSGNTQ
AAKLPGYAAAQPLLEEAARAQALEPALVIAVAAAESGFNADAVSRKGALGLMQVMPATAERYGVAGRSGT
DGRHAVMEPKLNVQVGSRYLADLLRMFDGDKELALAAYNAGEGAVVKHGRRIPPYPETRQYVDKVMRLYQ
TLVR
>gi|319761390|ref|YP_004125327.1| glycosyl transferase, family 4, conserved region protein [Alicycliphilus denitrificans BC]
MIWLSFVAFLSSVLAAAGVLRWAQDHAANYGRAVPQRFHYGDVPRLGGLAMLVGIALSWGLGRLTTAMGD
SSSLRMDSWVLWWLLALMPAVVGGMVEDVTQRLAPRFRLLLSLLTAVLAVSMLGLQLPRLDLPWLDALLA
TAPWLGVGIALLAVTGLPHAFNIIDGYNGLAGMVAIIVCLALAHVALQVGDRGLAAVLVSTAAATGGFLV
WNYPRGMLFAGDGGAYIWGGVIALASLSLVQRNPQVSPWFPMLLLIYPVWETVFSMYRKLVRGVSPGVAD
ALHFHQLIYRRIVRRVLHGDAARRMLKRNNRTSPYLWAFTLLTVVPAVLFWRYTPVLIGFCLLFMVLYVM
AYLAIIRFKVPGWLQP
>gi|319761391|ref|YP_004125328.1| acetylglutamate kinase [Alicycliphilus denitrificans BC]
MTDLLSIAPRDKAEILAQALPYIRKFHGKTMVIKYGGNAMTDPELQQDFAEDVVLLKLVGINPVVVHGGG
PQIEQALNRLGKKGEFIQGMRVTDAETMEVVEWVLAGEVQQDIVGLIHHAGGKAVGLTGRDGGMIRARKL
KMLDNKDPSIEYDVGQVGDIVAIDPSVVKALQDDAFIPVISPIGFGEENESYNINADVVASKLATVLQAE
KLVMLTNIPGVLDKNGQLLAELTPQQIDALIADGTISGGMLPKLAGAIDAAKAGVNAVHVVDGRVPHSML
LEILTDQAYGTMIRSH
>gi|319761392|ref|YP_004125329.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MSDSSPDSSVPGDAPASRRRLRPGERREQILHALAAMLEQPGAERITTAALARRLDVSEAALYRHFASKA
QMFEGLIDFIEHSVFTLVRQIVEHPGEAGGAQRAARVAAMVLQFGERNPGMVRVMVGDALVFENERLQQR
MNLFFDKVEATLRQCLRPAAEADGEAAPTVQAQVRAAALCDLIRGRLQRYARSGFRRLPTEHLDATLALQ
L
>gi|319761393|ref|YP_004125330.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MPVSTSSPKTARVSRREGRALHKGRQTKAAIVDAALGLATHIGLEGLSIGALADVTGMSKSGVFAHFGSR
EELQISVIREYHARFEQEVFYPAMEAPRGIARLRAMFDNWMKRTSVEIDSGCIYISGAVEFDDRAGPVRD
ALANSVLTWQAAMKRAIAQCKECGEIRPGVSEEQMLFEIHGLILALHYEARFLHTPGSMERANTGFDNIL
ARYRADGG
>gi|319761394|ref|YP_004125331.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MPTYNPPLRDMQFVLHEVFQVSDEFKAMPRHADVDADTINAVLEEAGKFAAEVTFPLNVSGDTEGCTLDQ
QTHEVTTPKGFKEAYAKYVEGGWAALSCDPEYGGQGLPHVVNQCLYEMLNSANQAWTMYPGLSHGAYEAL
LAHGTDAQKKTYLPKLVSGEWTGTMCLTEPHCGTDLGLLRTKAEPQADGTYRITGNKIFISAGEHDVAAN
IVHLVLARLPDAPKGSKGISLFVVPKFHVNADGSLGARNPIYCTGLEHKMGIHGNATAQIAIDGAVGTMV
GEPNKGLAAMFVMMNAARLGVGNQSLGLTEVAFQNALAYAKDRLQMRSLSGVKAKDKEADPIIVHPDVRK
MLLTAKAYAEGARALQIYCTLLLDKAHHHPDEKERKGCDELVALLTPIVKAFITDNGHIATNACMQVFGG
HGFIKEWGMEQFVRDNRINMIYEGTNTVQSLDLLGRKVLGNQGATLKKLGKLIGQLVAEEGVNEKMAEFI
NPIAILGEQMTKFTTEIGFKGMQNPDEVGAAAVDYLRVAGHLVFGYLFARMAQVSLRAIAAGSQDPFYVA
KLQTARFYFAKLFPETATLMRTARAGAKVLMDTDAALA
>gi|319761395|ref|YP_004125332.1| hypothetical protein Alide_0676 [Alicycliphilus denitrificans BC]
MRQALTAIVLMAITAPALAQMSPLGLWRSVDDKTGEPKAEIRIVDNAGVLSGRIEKTLRKDAKPTCTECQ
DDRKGQPIVGLEIIRGGKKDEGKDVWAGGRILDPENGKDYRASLTPVDGGKKLEVRGYLGPFWRTQTWQR
LE
>gi|319761396|ref|YP_004125333.1| 3-hydroxyacyl-CoA dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MTRFNVKKVAVLGAGVMGAQIAAHLVNVKVPVVLFDLPAKEGSKSAIAEKAIANLKKLKPSPIGVAEDAD
LIQPANYEEHMGLLKDCDLVIEAIAERMDWKLDLYTKIAPHVAAHALLASNTSGLSITKLSEALPEALRH
RFCGIHFFNPPRYMPLVELIATPATEARVIDQLEAFVTSGLGKGVVRAKDTPNFIANRIGIAGMLSTMKE
VENFGLTYDVVDDLTGKKLGRASSGTFRTADVVGLDTMAHVIKTLQDNLGPETDPFYGSFGTPPVLAKLI
ALGNLGQKTKAGFYKKVGRDILRFELESEDYVPAGQKADDVYGRMLKRPAAERLKLLRNAEGAPGRFLWA
ILRNSFHYAAVHLETIAESARDVDLCLRWGFGMKQGPFELWQEAGWLEVAKMVQEDIDAGKALCSAPLPK
WVFEGPVAEAGGVHTAEGSWSPALKKFVARRVLPVYERQLFPEKLLGEASLPDWQTAGTTLAESKALRTW
TLDGKVLIASIKNKMHAISPEVMEGLMEAVELAEQEYQAMVIWSGDAPFSVGADLEATMPAFVVGGADAI
DSIEAELQNLMLRIRYAQVPVVSAIHGMALGGGCELAVYSARRVAHMESYIGLVEVGVGLVPGAGGLTYI
ARRAAENAARSTGKDLLPFLTEGFTAAAMAKVGTSAIESRKLGYLLDSDIIVPHKDELLFVAINEARAMA
QGGWRAPLKRLFPVVGRNGIATIKAQLVNMEGGGFISAYDFKVASMIAEVVCGGDVDAGSLVSEEYLMQL
ERKAFCHLIGQPKTHERILGMLNTGKPVRN
>gi|319761397|ref|YP_004125334.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MKQVQDAYIVAATRTPIGRSGRGYFKNTRPDDLLVAAIRGAMAQVPMLDPKAIEDSIIGCSFPEGEQGMN
MARIAMGLVFDHPVGGVTVNRFCASGVTAIQMAADRIRVGEADVLIAGGAESMSLVPMGGNKPSFNPEVF
ARDENVGIAYGMGLTAEKVAQQWKVSREAQDAFALQSHLRAVKAQQVGEFSDEITPFEIVERSPNLATGE
VETRKRTVRLDEGPRPDTTREALAKLKPVFAARGSVTAGNSSQTSDGAGALILASEKAVKQFGLVPLARF
VSYAARGVPPEIMGIGPIEAIPAALRYAGLQSQDIGWYELNEAFAAQSLAVMNTLGLDPAKVNPMGGAIA
LGHPLGATGAIRAATVVHALRRHKLKYGMVTMCVGTGQGAAGIFERV
>gi|319761398|ref|YP_004125335.1| hypothetical protein Alide_0679 [Alicycliphilus denitrificans BC]
MTSHHSIHPLDEALALASETTGQYTGRTTPGYWNMVGPFGGITAATLLQAVMQHPARLGEPLSLTVNYAG
ALGEGPFTLQATPVRTNRSTQHWTLSILQAGADGAPVVTTTATVVTAVRRETWGATDTPMPAVPAPAQCK
PVRLAFRSEWLRRYEMRPVTGELPTQWDDSGHTSMTQLWMRDAPARPLDFCALAAMADIFFPRVWLRRAR
QVPAGTVSITVYFHAGGDLLAQTGTGYLLGQARAQEFRNGFFDQTALLWNEAGIVLATSHQIVYYKE
>gi|319761399|ref|YP_004125336.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MSNTSQDILVHDEGGVRTITFNRVERKNSITTAMYAQLADAFETAAQDAAVRVVVLQGDVAVFSAGNDIG
DFLQQPPSTQDAPVFRFLRAIATFPKPVVAAVCGPAVGIGTTMLLHCDLVYAGDNAAFSMPFVNLGLCPE
AGSSLLVPQMLGYHRAAEALLLGEPFMAEAALEVGLVNRVVPPTECNAIAQAQARKLAAKPLSALIETKR
LLKKGQTAAVLERMAEEGASFGRMLREPAAREAFSAFMEKRHPDFSKC
>gi|319761400|ref|YP_004125337.1| hypothetical protein Alide_0681 [Alicycliphilus denitrificans BC]
MAVQNPFFGKRETESFQPRQPSSSVLGGSVTSTAGASSNAAAAKPAASNTTESGGSKLTVGPNIKLKGVE
ITDCDTLVVEGTVEATMDSRVIQIAEQGAFHGTAEIDIAEIHGEFDGTLTVREKLVIFSTGKVSGKIRYG
KVVIEEGGQLSGEISVGVGSARTQAASSSSASPAASSSPPALAAA
>gi|319761401|ref|YP_004125338.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MSQDRTCTHTQLPTDKELVLKVMPMPADTNNNGDIFGGWVMAQVDLAGSVLPARRIQGRMATVAVNEFVF
KQPVRVGDLLSFFAEVKRVGNTSITVQVEVYAEHIRTQGRYLKVTEASLTYVAIDENGRPRPIPKLPGDA
P
>gi|319761402|ref|YP_004125339.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MRRYGEAPAPDSPRIRSDGATLRRLLPYLWEYKGRVLAAIAFMVGAKLANVGVPLLLKRLVDAMALPAGS
PTALLVVPVGLLLAYGGLRLANSVFSELRELVFAKATHGAARAIALKTFEHLHALSLRFHLERQTGGMTR
DIERGVRGIESLVSFALFNLGATLIEVLLVLFILARQFDAWFAVITLSALVLYIAFTVGVTQWRIQFRRQ
ANLFDSAAHSKAIDSLLNYETVKYFNNEAFEARRYDESLEQLRRAQLKSRSTLSMLNSGQQLIIAVGLVA
MLWRATEGVAAGRMTLGDLVMVNAFMIQIYIPLNFLGVIYREIKQNLTDLDKMFTLMDKEQEVADAPGAV
ALAGLDAPTVRFEDVHFAYDPARPILRGVSLTIPAGKTVAVVGPSGAGKSTLGRLLYRFYDVGIEPPRSP
TACGSLPPEGASAELGRPGVGGGGRITIAGQDIRAVTQQSLRRAIGIVPQDTVLFNDTVAYNIAYGRTGA
SQAEVEQAARAAHIHDFIMSTPQGYATMVGERGLKLSGGEKQRVAIARTLLKNPPILIFDEATSALDSAN
ERAIQAELRQVAQGKTTLVIAHRLSTVVDAHEIVVMEAGRIVERGTHAALLAQGGRYASMWALQQSIGE
>gi|319761403|ref|YP_004125340.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MYPRFSALLQSRIEADPQAPAFVHRDGVMTVASFASQVDRMTACLRDLGIAAGDRVAVWLVNRVEWLALL
MAAGRLGATVAAVNTRYRREEVAHILRTSGARWLITQMSHQRIDFLAILAELDAAQVPDLQQVLLLGGGS
DAPPAPSLLPMGLAWPMAALSWSQFPPEPGPDCSDVENPVVLFSTSGTTRAPKLVMHPQRTLVDHARRCA
HAYRLDAPGACLLTLLPLCGAFGLNSTLAAFAAGAPVVLPALFEADEAAALMVRHAVTHCFGSDEMVRRL
AETSDAPEPFPALRFFGFGAFTSNFSEIARACCRRGIPLHGLYGSSEVLAIFSAQADDLPLAQRLEGGGQ
PVAGVQARIRIRDEATGQLLPPGQSGQIEIQAPSLFLGYFGNPAATAEAMVDGYFKTGDLGHLRPDGSLV
FETRLGDAVRLGGNLVNPAEIEELVERYPGVREAQVVAVPIQGQDRPVAFVIFDAQPDLGDLLAHLRRSM
ANYKVPQRVWPLAAFPLTEGSNGNKISRTQLRQMAMDQLAIEAPQSQE
>gi|319761404|ref|YP_004125341.1| maoc domain protein dehydratase [Alicycliphilus denitrificans BC]
MSPRYFEDFEVGERFTSSGRTVTETDLTLFNMLSGDWNPIHADAEFAAGTRFGQRIVHGAFGVALLTGFM
HQMGIFEGTAVAMLSLQEWTFKAPILIGQTLRLELTVTELDPGSSQRVGRLGRHLQLRDQHQQIVQEGHS
DLLILKRAAAHPNGSI
>gi|319761405|ref|YP_004125342.1| nagm-like protein [Alicycliphilus denitrificans BC]
MQKNILSTMAWLTVSLSATAAVAQTPAQPYPSRPVTIVVPYSAGGPVDNFIRALGQQLSESWKQPVVVLN
KPGANEIIGADQVAKSAPDGYTLFAGTEASLTMSPHLYKKLPYNVEADFVPISQLISLPLMLFTHKGTPA
NTVSEFVELARKAKAQGKPLSYGSSGAGGIAHLPMVTFEKQEGISMTHVPYRGAANLIPDVIAGQVDAAV
LAVSVIEQHVKTGALKPLAVSSETRSVALPQVPTFKEAGVKDIHAIFSIGLLAPKGTPAAVVDKVASSTR
TIIATPDFRQKNIDAFSYVPVASSPTEFKAFLGSNSKLQAERVLASGVRLD
>gi|319761406|ref|YP_004125343.1| 2-nitropropane dioxygenase npd [Alicycliphilus denitrificans BC]
MNAITSRIPAVLQNLALPIIASPMFTVSYPELVLAQCKAGIVGSFPALNARQPELLDEWLHQMKAELDAY
RSAHPGQPVGPIAVNQIAHSSNVRLMQDMETCIEHQVPVIITSLRAPAREVVDAVHGYGGVIFHDVVNVR
HAQKALEAGVDGLIVVAAGAGGHAGTQSPFALVGEVRRIFDGPLALSGAMATGSAVLAARAMGADFAYMG
TRFIASREANASEDYKQAIVKAGASDIVYSNWFSGVHGNYLRESIERAGLDPDDLPVGDKAKMSFADGRS
KAKAWKDIWGAGQGVGQIHDLPEVREIVARLRAEYDLARARICAG
>gi|319761407|ref|YP_004125344.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MGHAGAVSEPRRRPYASSPEVLPVEQSPYLFFAEVVEAGSFATAARRLGMDRSNVSRRIKELEQTAGVQL
LRRTTRKMVLTDLGAAFYEQCLAVRSEVEQAKNLLLSHGDVVRGALHVSCPPAIGRQYLVPLFQTFCRRY
PAVSLQITLKSGALDLIEERIDVAIRFTNEPSPQHVARVLGHTRWIFCASPAYLAEHGTPHLPEDLAHLS
WLGMRARMELQLRKESALHRVVLRSRVACPDYALLGQMAHDGLGVCLLPVYVASHDLAQGELVQVLADYQ
IEPTPGSTLYAITLPGIHSSPQVKAFVQFLAETVQAEFTSLRAFVENRL
>gi|319761408|ref|YP_004125345.1| mazg nucleotide pyrophosphohydrolase [Alicycliphilus denitrificans BC]
MDVKALQRQLRDFAAARDWQPYHSPKNLVMALMVEAAELLELFQWKTITESRRFTRNASDKERVADEIAD
VLLYLLQLADHTDVDVEQAVEHKLRKNAQKHPTKHPELQPTASLPEQPKVHLLVDWENVQPDGSALKALV
PESTDVWLFHGPHQKVDDSSHRSIFGDSVTLVPRSGVGKNALDFQLTYYVGYISARQPDATFAIVSNDQG
YDPMLEHVRELGFKARRCGFHKLLLKTEEIQVLVPTPAPPPPVAAPAKKTPAKAADPKATHQDVRKLVQM
LQGMEPWERPGRRDALLALLQAHMGEIGMVSPRVAHALAQLQGQKHVAIKGDQVSYPPEPAAPASAAKKK
TAPAKKAVAPAKQAPAKAAQKTTVSQIAQAVIASLKKMPKNKPTRHAGLLKFIETHAVKAADPKAMSQQV
CALLEARKEVTQAPDGKSVTYPKMK
>gi|319761409|ref|YP_004125346.1| trap dicarboxylate transporter, dctp subunit [Alicycliphilus denitrificans BC]
MKLRTFLTTAVAAAAAVAFSTPALAQNYKSEYRMSLVLGTAFPWGKGGEIWAAKVKEKTNGRINIKLYPG
VSLIQGDQTREFSALRQGVIDMAIGSTINWSPQVKQLNLFSLPFLFPDYAAVDAVTQGDVGKSIFQTLEK
AGVVPLAWGENGYREISNSKHAIKSPADLKGLKIRVVGSPLFLDTFTALGANPTQMSWADAQPAMASGAV
DGQENPISVYQAAKLYTVAQKHITMWGYINDPLIFVVNKDIWNSWTPADREAVRQAAIEAGKEEIAIARK
GMVEADKPLLKQIEGLGVTVTQLTPAEREAFVKATRPVFDKWKGQIGADLVNAAEKAIAARKK
>gi|319761410|ref|YP_004125347.1| trap dicarboxylate transporter, dctm subunit [Alicycliphilus denitrificans BC]
MIATLLFVAFLVLMFVGVPIGAALGLAGAAAIALANADAQWFGLLAVPQNFYAGLGKYPLLAIPMFVLVG
SIFDRSGVALRLVNFAVSIVGRGPGMLPLVAITVAMFLGGISGSGPANAAAVGGVMIAAMSRAGYPGSFS
ASVVGAAAATDILIPPSVAFIVYSVLVPGASVPALFAAGMVPGVLAGVALIAPAVWMARRHKMGALEADM
PRPPFWRSLREASWGLAAPVLILGGMRAGWFTPTEAAVVAVFYGLFVGMAIHRTIGVRDLYVILREAGEL
SAVILVVVSLAGIFAFSLSTLGVIDPVAHAIVNSGLGEYGVLALLILLLITVGMFLDGISIFLIFVPLLL
PIMQHYGWDPVWFGVILTLKVALGQFTPPLAVNLMVSCRIAGVRMESTVRWVGPMLLAMFIVMVAVIAFP
QLALWLPAKLGY
>gi|319761411|ref|YP_004125348.1| tripartite ATP-independent periplasmic transporter dctq component [Alicycliphilus denitrificans BC]
MSSHPTPGPAEHAAPAGAADPSEPRSLRIEDWLTVIVMALLALITFANVIVRYFTDSSFAWTEEISVFLM
IVLALVAGSAAVARDRHIRIEFFCESGSAMRRRRLAQLGALLVALLFAVIAVLSMRVVWDDWRFEETSPG
IGVPQWWYSVWLPVLSLLIAWRAIGLLVLRTRQSDVEYLIDEAGDDGNGEPRP
>gi|319761412|ref|YP_004125349.1| regulatory protein lysr [Alicycliphilus denitrificans BC]
MRAMETKWLEDFVSLAETRSFSRSAQLRHVTQPAFSRRIQALEAWAGTDLVDRSSYPTRLTAAGTTLYDQ
ALEVLQALQNTRAILRAHTSAGTDMIEFAVPHTLAFTFFPAWVSAVRADFGPLKSRLIALNVHDAVLRLV
EGGCDLLISYHHPSQPLQLDAERYEMVTLGQEVLAPYAKAGPDGQPLFSLPGRAGEPLPYLAYAPGAYLG
RVTELILKQAGTAIHLDRVYETDMAEGLKAMALEGHGVAFLPYSAVKKELRSRKLASAAPPGVEDLQMVM
EVRAYREKPSRKEPAKSLAQALWTYLQAQGGKNPI
>gi|319761413|ref|YP_004125350.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC]
MKKHLLAAAITVLAAGSAIAQANDTLAKIKSSGAITLGVRESSGALAYTLGDGKYVGFHTEMAERVARDL
QKKLGLSKLEIKYQPVTSQNRIPLVVNGTVDLECGSTTNNLARQKDVAFANTTYVEEVRIAVKANSGISD
IKDLNGKTIVTTTGTTSVQTLRKNKRAEGMNFREVMGKDHADSFLMLETGRADAFIMDGSILAGNISKSK
NPNDFKIVGEALSVEPIACMLRKDDPAFKKAVDESIVAQIKDGTLAKSYDKWFMQPIPPNNTKVGLPLSP
ATKQAWEHPNDKPMEDYQK
>gi|319761414|ref|YP_004125351.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MSWDWQVFCQDTITQEVTQSCFGKGGDITYLDWLLSAWGWTVSVSLLALAIALVVGSLIGTLRTLPDSPW
VVRLGNAWVEFFRNIPLLVHIFLWYHVIPAIFPAMKSLPGFVLVVFALGFFTSARIAEQVRSGIQALPRG
QRYAGMAMGFTTVQYYRYVLLPMAFRIIIPPLTSETMNIFKNSSVAFAVSVSELTMYAMQVQEETSRGIE
VYLLVTALYVVSALAINRIMAFIEKRSRVPGMIAAGGGGH
>gi|319761415|ref|YP_004125352.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MMLHIDWSFLSWELLRGFVLKGFIFSLVLTVIATLGGVLFGTLLALMRLSGKKWLMAPATIYVNGMRSIP
LVMVILWFFLLVPLIIGRPIGAEASAIITFVAFEAAYFSEIMRAGIQSVPRGQVFAGQALGMTYSQNMKL
VVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFDVAGKNFGRPVEAYLAAAVAYFVICYSLSW
AVKRLHKKIAIIR
>gi|319761416|ref|YP_004125353.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MIELKNVSKWYGSFQVLSDCSTSIQKGEVVVVCGPSGSGKSTLIKTINALEPIQKGEIWVDGTAVHDPKT
DLPKLRSRVGMVFQHFELFPHLSVTENLTIAQIKVLGRSPDDAKKRGLKMLDRVGLTAHKDKFPGQLSGG
QQQRVAIARALSMDPIVMLFDEPTSALDPEMVGEVLDVMMGLAHEGMTMMCVTHEMGFAKKVSNRVIFMD
VGGKILEDCSKEEFFGNPDARQPRTKDFLNKILQH
>gi|319761417|ref|YP_004125354.1| ornithine cyclodeaminase [Alicycliphilus denitrificans BC]
MTRFIDLPTLAALVHDMGAAHFLCELADEIHTDFLRWSAFDKTARTASHSPHGVIELMPVSDDTLYSFKY
VNGHPGNPACGLPTVMAFGMLAEVATGLPLLLSELTLATALRTAATSALAAQALARSGSRSMALIGNGAQ
AEFQALAFHALLGIKELRVFDTAPDATDKLLRNLARTPGLKMIRAASVAEAVRGADIVTTATAAKRHARI
ITPDMLEPGMHLNAVGGDCPGKTELHPGVLRQARIVVEYAPQSRVEGEIQQLAEDHPVTELWQILSGQAS
GREHAGQVTVFDSVGFALEDHAALRFIHRQALARGLGADLALVPTDGDPRDLFGRTRSHLRRVV
>gi|319761418|ref|YP_004125355.1| had-superfamily hydrolase, subfamily iib [Alicycliphilus denitrificans BC]
MQPLALWQPPRIAGLLTDIDDTLTTEGAITPDALAALADLKAAGLHVIPITGRPVGWSEPFAQAWPVDAI
VAENGAVALLPGSSKQTGSQSAPDRRMQLSKIYQQDDATRAANYARMQQVLADIEARVPGARRATDSPGR
ECDIAIDHSEFTHLPQAAIDECVRIMRAAGMNATVSSIHINGWYGAHDKLEGARWIVRELLSRALDDELG
QWVYVGDSTNDQRMFEHFPHSVGVANIARFVPQLSHLPRYVTQSERGAGFAELARAILNGQAR
>gi|319761419|ref|YP_004125356.1| peptide chain release factor 3 [Alicycliphilus denitrificans BC]
MSYASETRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQIAGAVKGRKASRHATSDWMEIEKQRGISVASS
VMQMSYRDHVINLLDTPGHKDFSEDTYRVLTAVDSALMVIDAANGVEAQTRRLIEVCRQRDTPIITFVNK
MDREVRDPLDILDEVERELGMPCCPMTWPVGQGKNFGGIIDLRTQSMTVFQAGSEKRPEDFEVIPLAEVD
KLRARFGQAYDDAIESMELAVGASIAWDHQEFLAARLTPVFFGSGVNNFGVMEVLNAVVDMSPPPGPRVA
FTEVNRQREERTVHPEDESFAGVVFKVQANMDSNHRDRIAFVRVASGKYTPGMKMKVQRTGKELRPTSVV
TFMSQRREAVDEAYAGDIIGFTTHGGVQLGDTITDGPSLQFTGLPFFAPEMFMTVVLKNPLRTKQLQQGL
MQLGEEGAIQVFKPEAGGNMLLGAVGQLQFEVVQHRLKTEYDCDVRLEGCQYTGARWITADTPVELREFE
NAYPLRMARDAADTLAYLCTSPYDVRLAQERFPKIHFHPLREHAGLALGTS
>gi|319761420|ref|YP_004125357.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MDPKDKVAIVTGGASGIGRALAQRLAAEGARVVVADLHLEPAQAVADEVKGMAVRCDVSREADIQALVAA
TRERYGRVDAYFSNAGILGRPGGIELEDPLWEAMWHIHGMAHVWAARAVVPAMAARGEGFFLVTASAAGL
LSIVESAPYAVTKHAAVAFAEWLRIAYGRRGVQVACLCPQAVQTAMISDGGGSAGVDGVLPPGQVAGDVL
QAMGSGQFLVLPHAEVAQYYAAKAQNPDRWLGGMQKHYARHMQQQG
>gi|319761421|ref|YP_004125358.1| adenosylhomocysteinase [Alicycliphilus denitrificans BC]
MSAVLKASPDSAIADISLADWGRKEIRIAETEMPGLMAVREEFAAQQPLKGARITGSLHMTIQTAVLIET
LKALGADVRWASCNIFSTQDHAAAAIAATGVPVFAVKGESLEDYWDYTHRIFEFGPKGSADEGPNMILDD
GGDATMLMHLGMRAEKDPSVLANPGSEEEKIVFAAIRAKLAEDATWYSRKSARIIGVTEETTTGVHRLNE
MSAKGTLKFRAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKVAVVCGYGDVGKGSAQALRALS
AQVWVTEIDPINALQAAMEGYRVVTMEYAAPRADIFVTTTGNRDVITFEHMQAMKDESIVCNIGHFDNEI
QVAKLEAHCRWEEIKPQVDHITFPDGKKIILLAKGRLVNLGCATGHPSFVMSNSFANQTLAQIELYTRPD
AYEAGKVYVLPKILDEKVARLHLKKVGAQLTELTDAQAAYIGVNKSGPYKPDTYRY
>gi|319761422|ref|YP_004125359.1| ribosomal RNA methyltransferase rrmj/ftsj [Alicycliphilus denitrificans BC]
MRADVFLVEGGHAATRSQAQRLIAAGVQWRLASSLPWNRVAKNGDDIPAGAELQLLDAAEAKYLSRGGLK
LEGALAATGIQVAGLRCLDVGQSTGGFTDCLLQHGAAQIVGVDVGQGQLHERLRADPRVIGVEGLNARHM
TPETLLEACEEALSERVEAEPEDNDTQPEAPYAWMRNGGLVDDAYDDSQDAKEHEIEAFKAERATRARER
AEGRLATLRRRLPGREDVAIPQAFGLVTGDLSFISLTLVLPALVPLLAPGGDLLMLVKPQFELQPGQVGK
GGIVRDAGLYAEVERRIRACCADLGLQVIGWHGSAIQGGDGNREFFIHARRAA
>gi|319761423|ref|YP_004125360.1| 5,10-methylenetetrahydrofolate reductase [Alicycliphilus denitrificans BC]
MSLPVSFEFFPPKTPEGADKLRAVRRQLYARAPQFCSVTYGAGGSTQEGTFATVRAIIEEGVDAASHFSC
IGATKAGVRQQLAELKAMGVKRLVALRGDLPSGYGLGGEFQYASDLVAFIRQETGRDFHIEVAAYPEMHP
QARSPEADLQAFATKVRAGADSAITQYFFNADAYSRFVDDARRLGVEIPIVPGIMPITGSSQLMRFSDAC
GAEIPRWIRLRLQGFGDDMASIRAFGLDVVGRLCEQLVRAGAPGLHFYTMNQSAATLALCERIGC
>gi|319761424|ref|YP_004125361.1| rare lipoprotein a [Alicycliphilus denitrificans BC]
MKPERRPGEGSGAPALRAPEPEAPVLLASGQASWYADSLHGRRTANGERYDREEFTAAHRSLPFGARLCV
RSLVNGRTVIVRVNDRGPFTPGRIIDLSRAAAEELGMVGLGIKPVELWQLGADDEACPESLEPAAQGSGL
GLDAEAAAKALQQPAPKAKAPAARKPRRNKRR
>gi|319761425|ref|YP_004125362.1| hypothetical protein Alide_0706 [Alicycliphilus denitrificans BC]
MRLATIGRMFSYRHAFHAGNHADVLKHTVLIATLQHLLQKDAALTVLDTHAGAGLYRLDGDYASTSAESA
DGILRLVPPAAPAALAPALQDYVDMVRAFNQGEATRVYPGSPFIAQRLLRAQDRLKLFELHPTDARALAG
NVAQLDAGRQVAVLAQDGFEGARQFLPPPSRRALVLCDPSYEIKSDYARVQDMLQDALKRFATGVYAVWY
PIIPRPEAHELPRRLKTLAQKAGKSWLHATLTVKSGKTAPAGTAPGRRPGLPASGMFLINPPFTLDAALR
AALPQMAELLAQDRHAAWTLEGGAP
>gi|319761426|ref|YP_004125363.1| serine/threonine-protein kinase-like domain protein [Alicycliphilus denitrificans BC]
MSAVPRPSHADALPPGTRLGEFEVQALLGVGGFGMVYQAFDHSLQRCVAIKEYMPASLAGRADGHSLWVR
SSSNEQSFQAGLASFVDEARLLARFDHPSLVKVFRFWEANHTAYMVMPLYRGMTLKQARAHMRTPPPEAW
LRTLLWSVTSALRVLHDGQTLHRDISPDNIFLQDHGPPVLLDLGAARHAIGGGSHGHAAVLKVHYAPLEQ
YADASAELGQGPWSDLYALGAVVHGCLCNDTPLPATLRAVRDRMVPFPRVARTVRRQFGIEYSRPFVEAI
AQCLALQPQERPQSVADFVQAMGMAEAPAGLESFDFRDALGDIWVEPQSKDAQGVAVPMIDAMTLSQPQS
APLAVSAAQRAGEASTAVADAGAAPAFADTQVAPPPSRERPPRRRHRVRAQGRGHGTAAGQPGKADISSG
AAAQVHRTGGQAPMMWAMAGSVAAMALVGSLWWMQRERAPHRTPESEIITELAEPAPPPGLMRATHEVTA
SALLHPADMGLAPAAEVARPMPARREGEIPAPPPAPVAVQQAMPAPAPPAPRAAPPGPDEACASAGFFAR
PMCIHRECQKAGMARHPVCVENRLRHEEQELQRQLYAQ
>gi|319761427|ref|YP_004125364.1| ribosomal protein l13 [Alicycliphilus denitrificans BC]
MEKDRQTLSEEKLMTTFSAKPAEVVHEWFVIDATDKVLGRVASEVALRLRGKHKAIYTPHVDTGDFIVVV
NASKLKVTGTKSLDKVYYRHSGYPGGITATNFRDLQAKHPGRALEKAVKGMLPKGPLGYAMIKKLKVYGG
AEHPHSAQQPKPLAI
>gi|319761428|ref|YP_004125365.1| ribosomal protein s9 [Alicycliphilus denitrificans BC]
MIGEWNNGTGRRKSSVARVFLKKGSGKITVNGKDIQQYFGRETSIMITKQPLVLTGNVEAFDIQINVHGG
GESGQAGAARHGITRALIDYDAALKPQLSAAGFVTRDAREVERKKVGLHSARRAKQFSKR
>gi|319761429|ref|YP_004125366.1| iron-sulfur cluster assembly accessory protein [Alicycliphilus denitrificans BC]
MSAVATPADTEMPAPILFTDSAAAKVAELIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMT
KNGVSLLIDAMSYQYLVGAEIDYKEDLQGAQFVIKNPNAETTCGCGSSFSVQDQ
>gi|319761430|ref|YP_004125367.1| hypothetical protein Alide_0711 [Alicycliphilus denitrificans BC]
MLTAYAGWDSPDFTFQDFRYFLNGKQIAGDSRSFVQRIESRGYSGPGEESIRVGDIVYVKWRHKPTGTVY
ENTIDLRGRLPAPIKEGGALYFVLAHETVHVYLVGPPQPWENRKPIYGCDKLKKIGKAEPTPDNRARAYN
CADKVWKVYPEQKLINVPLEQP
>gi|319761431|ref|YP_004125368.1| hypothetical protein Alide_0712 [Alicycliphilus denitrificans BC]
MDSRARWYFGLMSGTSLDGIDGVLAEFSEGKCRVALHGSAPLAPDLRAELLALNTSGNDELHRAALAANA
LARGYAGLVHGLLAQAGLPPEAVHAIGAHGQTVRHRPQAFGGTGYTLQLNNPALLAECTGITVVADFRSR
DVAAGGQGAPLVPAFHQGVFGQAGRTVAVLNLGGISNLSILRAGGGVLGFDCGPANALMDHWCERHTGRP
YDAAGAWARSGRPIGALLHAMLAEPFLAAPPPKSTGRDLFNPRWLARQLDGTGSGDASPQDVQATLAEFT
ARSCAQELRRHAPECGLLIVCGGGALNQYLMERLQALLPGVGVEDSGCHGLPPLQVEAAAFAWLARQCMA
GEAANLPSVTGARGARILGAIYPA
>gi|319761432|ref|YP_004125369.1| peptidase m23 [Alicycliphilus denitrificans BC]
MPGVTLLNNGLTTACLLLLDRLKQSVQKHPKRITAAVATLLLTGGGGAFAVASFAPDPADLPVTTVSLPV
QSLAGDEQLSSLVDMPPFALYRSDTTRGSDTAESILQRLGVADPAAAAFLRGDGLVRQQLLGRSGRSISA
ETTDDHRLVRLTARWAPDEGSQFQRLVVERKGDGSFASRTETAPLTVGSRLAGGIIRSSLFAATDAASIP
DAVAIQLAEVFSGDIDFRRALRKDDRFSVVYETLEADGEPLRSGRVLSAEFQNGGKTYSAIWFQPPGAGK
GSYYTLDGQSMRRAYLTSPVEFSRVSSGFAMRLHPIHKTWRAHLGTDFAAPTGTAVRTVGDGVVDFAGVQ
NGYGNVIYVKHRNQHVTVYAHLSRIDVKKGQAVDQGQKIGAVGATGWATGPHLHFEFRVNGEHRDPMTIA
RESESAQPVPVAARPAFDRLAANMRVQLSSAEQIMQASAE
>gi|319761433|ref|YP_004125370.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MNQSAVTTFPVTDEVGRALEVSLRGVDELLPRQEWVQKLARSQATGQPLRIKLGLDPTAPDIHLGHTVVL
NKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQIKVNAETYYTQAAKVLDPARTEIRYNSEW
SDALGARGMIELSAKYTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVALRSDLELGGTDQKFNL
LMGRHLQQEYGQEPQCVLTMPLLVGLDGVDKMSKSKNNYIGITEDANTMFAKVLSISDALMWDWYTLLSF
KSLAEIAALKKEVEAGRNPKDAKVMLAKEITARFHSAAAADAAEQDFNNRSKGGIPDEIPELSLSGAPLG
IGALLKQAGLAPSTSEANRLIDGGGVRVDGGVVSDKGLRLGAGTYVVQVGKRKFARVALG
>gi|319761434|ref|YP_004125371.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MPSPSHLRTRPVAVGHWRAFLAVARHLNFRAAADELALTQSAVSRQIQALEDEVGVPLFLRHTRAVELTG
AGVQLHRAVAPALDRLDAAVRQVRQMAGRRSVAIATWASFASMWLIPRMEEFQCAHPDIDIRIDTSDSVV
DLDTADVDLALRWATPGGSAPGAERLFGEQLAVVASPWLLKSMPPVRQPADVARFALIEAGDAHRQPYFD
WITWGRWFEANGLGGLQPQRWLYLNYAQQIAQAALAGQGLALARMPLVAQSLAAGDLVEVLPGHRLDAPL
AYWLVMGPRSGERPEVQAFRAWLLLQAEATRAAVGEPD
>gi|319761435|ref|YP_004125372.1| udp-n-acetylglucosamine pyrophosphorylase [Alicycliphilus denitrificans BC]
MTQLDIIIMAAGKGTRMKSRIPKVLQRLAGRPLLHHVLDQAASLQARRVVVVTGHGATEVEAACAGGAGL
RAGFDLQCVRQEPQLGTGHAVQQAVPRLAGDGTVVVLSGDVPLTQAATLRALVEASGGERLALLTVGLPD
PSGYGRIVRGAGGTVLRIVEHKDASEAERAIGEVYSGIMAVPARLLAAWLARLTNDNAQGEYYLTDVVAM
AVADGVPVVAHRITDALQVAGVNSPVQLAELERAHQQRQAQALMEQGVRLADPARFDLRDDARGGRAQLV
CGQDVEIDVGCIFTGRVEIGEGARIGAYCHIGNAVIGAGAVIHPFTHIDGEKAGASVGEGALVGPFARLR
PGAQLGREVHVGNFVEIKNSQLADGAKANHLAYLGDATVGERVNYGAGSITANYDGANKHRTVIEADVHV
GSNCVLVAPVTIGAGGTVGGGSTITKDTPPGALSVARGKQVSIAGWKRPARQAK
>gi|319761436|ref|YP_004125373.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MTAEGGATRGGTAQDRLQAELDEARRQMAAMAAAHEAFLRGVSHDLRAPLRHVTSYGALVRELLQELPAQ
YPQVEEALGFLATMDASARRMGLMIDGLQAIARAGRAPLRLQAVDVGAAVQQARALLGGAGDGVQWCVAP
AMPAVRADAELFGQLLAQLLGNALKFTRGVARARIAVHAEPDGQGRVRITVQDNGAGFDGARAQQLFGVF
QRMHREADFEGVGAGLALCAAIAQRHGATITAAAAPGAGCSIRLDWPGAA
>gi|319761437|ref|YP_004125374.1| merr family transcriptional regulator [Alicycliphilus denitrificans BC]
MATTPNFLDNALAELLDEQARLTLDDLARSCCMAPGWVIERLEAGLLHGEQAGGHWQFTSATVVRARRLA
RLESTFDADPELAALTADLIEEVSALRQRLHQLEARLGLMP
>gi|319761438|ref|YP_004125375.1| heat shock protein dnaj domain protein [Alicycliphilus denitrificans BC]
MEFKDYYKILGVERDASAADIKKAYRKLARKYHPDVSKEADAAARMAEVNEANAVLSDPEKRAAYDSLGR
EAPHRPGQDFRPPPNWDAGFEFTGAPGAEGMDSAEFSDFFEQLFGHAARAQRAQRGGGAQARGAEQPRQR
GRDHHASIELDLRDAYHGAQRTLTLHGARLDEGGHLVNEERQLQVTIPKGVREGQLIRLTGQGGPGLGGA
PAGDLFLEVRFKPDARWRAEDRDVYQSVSVAPWEAELGGAIEVQTPGGNTVEVTVPPHWKSGRKLRLKGR
GIPAATPGDLYLELHVSLPAAATPAQQQAYRAFAQAFPQFQPRAAHGTQGA
>gi|319761439|ref|YP_004125376.1| transcription regulator asnc-type-like protein [Alicycliphilus denitrificans BC]
MEYDFTPDAIDLQLLDLLQSDASLSNQALAERVHVSPPTCLRRVRRLQASGLIERQVALLQPDRLAALQG
HGLTAIVEVSLDRQGAEHLAAFEARAVADPAVQQCWRVSPGPDFVLVVHARDMPGYLALSQRLFTQDANV
RNVKAFFATHRAKFETKLPVALS
>gi|319761440|ref|YP_004125377.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing [Alicycliphilus denitrificans BC]
MCGIVGAVSTRNIVPILVQGLQRLEYRGYDSCGVAVHEASLGGQPAGGLRRARSTARVAELLAQVAHDGL
QGATGIAHTRWATHGAPAVHNAHPHFSHGAGEAPADAARAGRVALVHNGIIENHEELRAQLQARGYVFSS
QTDTEVIAHLVDSLYDGDLFQAVRSAAGKLRGAFAIAVIHKDEPHRVVGARAGSPLVLGVGDGENFLASD
AMALAGVTDQIVYLEEGDLVDLQLGRYWITGPDGQPLPADSRPVRTVHAHSGAAELGPYRHYMQKEIFEQ
PRAIADTLEGLQGIAPELFDGAPRHGQPGAAAWRVFKEIDSVLILACGTSYYSGCAAKYWLESIAAIPTQ
VEVASEYRYRTSVPNPRTLVVTISQSGETADTLAALRHAQGLGMRHTLTVCNVATSAMVRECQLAYVTRA
GVEIGVASTKAFTTQLAGLFLLTLALAQAKGRLSEESEEQYLKAMRHLPAALQAVLALEPQVISWAEDFA
KMENALFLGRGIHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVTSSMPVVTVAPNDELLEKLKSN
MQEVRARGGVLYVLADARTNIESSEGVHVIRMPEHYGPLSPLLHVVPLQLLAYHTACARGTDVDKPRNLA
KSVTVE
>gi|319761441|ref|YP_004125378.1| hypothetical protein Alide_0722 [Alicycliphilus denitrificans BC]
MSNLKYPADLAVTVQDFQASGWQQALDGVQRFTDYWTSLSRAAELASSGADAKKTKVLWLLADAASMRLI
PASTNQPFDAMLRTQDRRSALPDDFTADDIAFFNDALPHVADARLRARLADLVWLRKGGPRGPSAALTAI
DAYRETSLTPDGWLDGGRQSWSRALRLALSLRTAAGTRFAEMEFAMRAAFDAADWPNGRFFAHSLAKVMH
EYKVSENDRPAVAAKLAALGAEAEAAGHFQGAGTYFDAASSWYAAAGDKVSAARMTAAHAESWVKQAEGR
GERGSQPSALVAAKFYENAIQVLRDVERPQRAVLRVDERIEELRFLQIDAGERSLGEMGLVRTPGVSIED
LVRSSRQAVAGKPVLEAFADFCSLYEGVDLERAREGVLQRMRDSPLQALFGKTILSRDGRVIAKRPAMGM
DVQLSPSDEESIFAGMVEEHMLLLQFVVQGQIVPAWQQLTLEHRVPEGEFLELARNASIVPKGRAALFAK
GLYAGYDGDFVTALHVLVPQLEHLVRHHLKAAGAITAHLDPEGLEKEVGLSSLMEMPEAGKVFGAPLCFE
IKAVFCSAYGPNLRNELAHGLLDDEACLSIPGVYAWWFMFRLVFVDFWNSQHQSLAAALAQDRERQQAQA
AAQADAEVGGASSAPPAPSESR
>gi|319761442|ref|YP_004125379.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MKAYIDRHRDDYGVEPICRALQMAPSCYWRHAARQRNAQLRSARAQRDEGLKADIQRVWHANWQVYGADK
VWLQMNREGIVVARCTVERLMRAMGLQGARRGRAVRTTTPDTSAPCPLDHVNRHFHASRPNELWVSDFTY
VSTWQGWLYVAFVVDVYARRIVGWRVSRSMQTDFVLDALEQALYDRQPAAHALTHHSDRGSQYVSIRYTE
RLDQAGIQPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGI
PPAEAEANYWRQLAASDTSTKVST
>gi|319761443|ref|YP_004125380.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319761444|ref|YP_004125381.1| hypothetical protein Alide_0728 [Alicycliphilus denitrificans BC]
MKNAFTTATLSMCLALGATSVFAADSISKDSMGKGQMGMEKSSMDKSASHKDAMGMNKGAMTKDGKSSMD
QMGKGGMSKDKMSK
>gi|319761445|ref|YP_004125382.1| oxidoreductase molybdopterin binding protein [Alicycliphilus denitrificans BC]
MSTPTSIWHRDNAEAVVADARKLLARQLPQASRRQFLTRGLTLGGLGLLSGCSIDDNATAEAALMRISRF
NDRVQGWLFDPSRLAPTYLDSMITRPFPFNAFYGEGEVPQVDGDGFQLEVTGLVADKRRWRLHELRALPQ
YTQVTRHICVEGWSAIGKWGGPRFGDFLRAVGADLGARYVGFECADGYYTSIDMATALHPQTLLALDWDG
QPLPPKYGFPMKLRMPTKLGYKNPKHIRAIFVSNTFNRGYWEDQGYNWFGGS
>gi|319761446|ref|YP_004125383.1| transmembrane hydrogenase cytochrome [Alicycliphilus denitrificans BC]
MSSPSPQPSKRNKPLQPLWLRVTHWLNAVAVLVMVTSGWRIYNASPIFDFVFPADITLGGWLGGALQWHF
AGMWLFVLNGLAYLLLNLATGRFARRLLPVTARGILRDAWLALTARLSHGDMGRYNQMQRAAYLFAIADL
VVLVLSGLVVWKSVQFPLLRELLGGYDTARHIHFYGMAAIVGFACVHLVMVVLVPRSLLAMLLGRSTLRR
TTAKEATP
>gi|319761447|ref|YP_004125384.1| response regulator receiver [Alicycliphilus denitrificans BC]
MNTPKRILIVEDDDSIAELLRMHLSDEGYDVERVADGRLGLAAVERGGWHALVLDLMLPGVDGLEICRRA
RAMTYYVPIIITSARSSEVHRILGLELGADDYLAKPFSVMELVARVRALLRRSEALARNAKLEAGVLSLG
GLSIDPIAREARVDGQSVELTPREFDLLYFFARQPGKVFSRLDLLNQVWGYRHDGYEHTVNTHINRLRIK
IERNPADPKRILTVWGRGYKLAEDAL
>gi|319761448|ref|YP_004125385.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MTVQSLSLSQRLSAVFVLLLLACCAASVVLQMRGSERHEQEVIQRLSLDLAPQIARYPELMEPRGFNPSA
VSGLFDKLMAVNPSVEVYLLDAGGRIQSYSAPEGAVKRLQVDLAPVRRLLGGGALPIFGDDPRSPDGRKV
FSAAPLKAAGRDAGYVYVILQGESRESLAARVNAGSAANAMLWSMTLVALLGLMAGLAAFRLITRPLRTL
TEAVRGLETHGMSWLPQARPLLKQAARSGGEIALLGQSFERLAQRTQEQWQALRNQDQQRRELFANLSHD
LRTPLTSLHGYLETLRMKSEVLEPQEQRRYLDIALEQSRKVGRLAQEMFELARLEYGVVKPEMEQFFLAD
LLQDVFQKFELAAEAKHQRLVADIAPGLPPITADLAMMERVLMNLIDNAVRVAPEGGEITVELQPHAQGG
IEVTVRDTGPGISAALQEHLFERPAFTGYAAAQGARSGGFGLMIVYRILQLHESTIRLMSQPGAGAVFRF
VLR
>gi|319761449|ref|YP_004125386.1| hypothetical protein Alide_0733 [Alicycliphilus denitrificans BC]
MHPTLKSLALVTSTLAMAAPSVTHAAQNGCTVKARSDSVVLMHCKENLSETAWVEAAKAACEPGKACNVW
IWEDPGKMPLVAPKTDAELPKSATGAAVAVWANDTASLIKLKKVR
>gi|319761450|ref|YP_004125387.1| hypothetical protein Alide_0734 [Alicycliphilus denitrificans BC]
MLTLSKFLRHIGSALALATASLATYAAPVTTQLGFLVDASGSIGSSNFQTMRNGYAAALAALPTDGSIEV
TVVTFSSGTTTVVSPTVVTAASLPGIIAAVNSMAYSAGLTATAAGIAAISSLMTGSSNFSTGLNSMINIA
TDGEPNIPGNNPNQAAINAAIAARAAGIDALTAEAIGSFDVSALRSLVFSPVNGPCNNCGTFLPDGSSPP
NPMTSNPWVLAVNSFNDFPTAIHNKVQASTGQVPEPGILMLMALGLVGLGITRRSRSA
>gi|319761451|ref|YP_004125388.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase [Alicycliphilus denitrificans BC]
MLIQPVVLSGGSGTRLWPLSREKYPKQLLALMGEDSLLQATLRRFNGVSGADSAPPLVVCNDEYRFVVAE
QLRLIGRLGRIVLEPVGRNTAPALTLAALAAQSGGEDPVLLIMPADHVVTQLAAFQEGVRHAARLAQDGA
IVTFGITPDRPETGYGYIQAGAAVDEDGARAIARFVEKPDRATAEGYLQAGDYLWNSGLFVLRASVWLKA
LALCRPDILEACEAAWKGGASDLSFWRVNAEAFAACPSDSIDYAVMERLAGAQSVAGLPRGVVLPLSAGW
SDVGAWDALWQILPKDADGNVVQGRTLMQDSSNTLALSSGRLLACVGVQGLVVVETPDAVLVADQRHTQD
VKKIVDRLKRDGGTEGVLHRKVYRPWGWYDGVDGGERFQVKRIMVKPGGKLSLQMHHHRAEHWVVVRGTA
RVTKGEEVFLLTENQSTYIPLGVTHRLENPGHVDLEMIEVQSGSYLGEDDIVRFEDYYGR
>gi|319761452|ref|YP_004125389.1| polysaccharide export protein, pep-cterm sytem-associated [Alicycliphilus denitrificans BC]
MHKNVSRLLGSMVRVLAMAGVAVAMVGCGAMRGGDYPAAPAQAATPDYNYVVGPGDTLNIIVWRNPELSQ
VVPVRPDGQVSTPLIDGLVAQGKTSAQIARDVEKELGKYVRDPVVTVIVTNFVGPYSEQIRVVGEAAKPQ
FLPYKQKMTVLDVMIAAGGLTDFADGNRATLVRSAEGNKRYKVRLDDLIKRGDIGANVDVLPGDILIIPQ
GWF
>gi|319761453|ref|YP_004125390.1| polysaccharide chain length determinant protein, pep-cterm locus subfamily [Alicycliphilus denitrificans BC]
MDELLGQITTAARGMWIYRRVAMLTTWLVGAIGVGVVLLMPDYYQASARVFVDTQSILRPLMTGIAVQPN
IEQQVSMLSRTLINRPTVERLVRIADLDLGSQSKASTDAVVDSVTKSISIQSTGRDNLYTLSYRNPSPEK
AQRVVQALLTIFVESSLGAARQDSDSARRFLDEQIKSYEAKLTEAEGRLKAFKLRNIEMQSQSGLDSAGR
AAEIDNQLSQARLDLREAESARVAAGRQLEILRSQAAKSPVGSAPDVQTPELDARIYAQKRNLDTLLQRY
TDEHPDVVRTRFLIADLEAQKRREVEALRRKAQEGHAAPAVETNPAILELSRIYSAAEVQVASLRARVVE
YESRSRRIHEQLKVAPQLEAELAQLNRDYQVNQKNYADLVARRESALMSGKLENTSNVAEFRVIDPPRVA
PKPVAPNRLLLMPISLLVAIGAGLGMAFVMSQVRPVFFDGATLRQVTQLPLLGVVGQIASDESRRRESRS
LMRFIMACVAFLLLYAGGMAALSIHSGVLG
>gi|319761454|ref|YP_004125391.1| non-specific protein-tyrosine kinase [Alicycliphilus denitrificans BC]
MTSSIEKAAQRLEQLRKAGVSLAGDKGRPTEAAAQESAYLPEHAAHFAGMDSVEAQAAAHSKPGTKTVQI
DLTALGASGFVTPNAPRSVTTEQYRVIKRPLLENATGKGASLVAHGNLIMVTSALPGEGKSFTAINLAMS
LAMELDHTVMLVDADVTCPSVMTKLGLPPAAGLLDVLQDDKIKLSDVLLRTNVDKLTLLPAGLPHPRATE
LLASDAMTSLLDEMGKRYSDRIIIFDSPPLLLTTEARVLAGHMGQVVIVVQAEKTLQSQVEHALSTIESC
PIKLMVLNQVRSSGLGAYGYGYGYGHERMVGERGPATAAA
>gi|319761455|ref|YP_004125392.1| pep-cterm system associated protein [Alicycliphilus denitrificans BC]
MHLQYCRIASTHVAGRAVWALAAASALSPGIALAQVPDVSTAEPPGFAPVQSPVVPTEPTDAIVKRRDNA
PADSRQSGVWLEPRITVQHTVTNNARLDATHISDQVTEVNPGFRLVSDTARINGFVDYSLRTAHYARGTV
SDQVWHNLNAKGTAEAIENRVFVDVAGVVALQPISAFGAPGVDSPANPNMAQTSSFRVSPYLKGSFGSNV
DYEARYSVQDTRSDAENRASVTVQGWLLHLGSKPDGHTIIGWALDAMQEDAEFSTGRNIDTTTLRARMSY
LASPQLLLVGIGGVESTNQLSPTHKSHGIVGFGADWRPSNKTRLFLERESRYFGEAHKVNFEYRTSRTIW
SYTDRKGIFAGLGAQSSASMGSLFNLLDSFYARTEPNAIRRTQLVLAEIERRGLPADMQVFPDFLTSSST
LQRLQELSVALLGQRSTFTLAVLRSDTRLLDGTLQLGDDFDANTRIRQRGWRLMVGHRLTPNASINASLG
EMHSVGSVPGLETRVRPLILGWNTLVARRTNVGIQLRRVLSDGSVTRYNESAIMGFITHRF
>gi|319761456|ref|YP_004125393.1| secretion atpase, pep-cterm locus subfamily [Alicycliphilus denitrificans BC]
MYEAFYGLTSKPFQLNPDPGFYFSSKQHQRARAYLEYGVMCCEGFIVITGEVGAGKTTIVRGLLDSLDPD
TVVAAHLVSTQLGADDTLRLVGAAFGVRVHGVPKGDLLLALEAFFVAQTLKGKRCLLIVDEAQNLQPQAV
EELRMLSNFQNGQDALLQTFLVGQPEFREILQSPGMLQLRQRVIATCHLGPLDSEETREYILHRLKCAGA
SDKPTFDSEIFEGIYRFTAGIPRRINTLMDRVLLQGFLTDKIHIDLELLNEIIHEIQSEMNVPPKVAHPW
ESPLRTATRGALPYDDSELADLSLDDELASGLSSNLANITAEQLSAHLLRIERSVLRQERVNLEILMNLQ
KLVAAARRSHPDSAAG
>gi|319761457|ref|YP_004125394.1| polysaccharide deactylase family protein, pep-cterm locus subfamily [Alicycliphilus denitrificans BC]
MHDPGPITNALTIDVEDYFQVSAFAPYIKRSEWDSRECRVERNVDRILALLDDRGVRATFFTLGWIAERY
PAMVRRIVDGGHELASHGYGHERASDLSETDFFNDVHRAKALLEDIGGMLVLGYRAPSFSIGSANMWALD
TLLRAGYRYSSSIYPIRHDHYGMPDAPRFSHQIRQGLIEIPPTTLRIFNHNLPSSGGGYFRLLPYSLSHW
MLRHVNTQDHSPAVFYFHPWEIDVRQPRIQGIGFKTRFRHYVNIGRMEKRLGLLLQDFCWGRMDHVFLPR
HAPEVSLV
>gi|319761458|ref|YP_004125395.1| femab-related protein, pep-cterm system-associated [Alicycliphilus denitrificans BC]
MELTIHRLDPNNASDTARWDDFVRGCAQATFFHRSGWQALIREVFRHDTYFLFAESGAGGGIRGVLPLGH
VKSRLFGNALVSLPFSVYGGVAALDEQAASALEREAECLAERLGVDHLELRNVQRRHADWPLQDLYVTFR
KPIEPKEEANLLAIPRKQRAMVRKGIKNGLTSHIDTSVDRFFALYADNVRRHGTPALPKAYFKALLRIFG
PDCEVLTVCSPDGHPISSVLSFYFRDEVLPYYAGDASAARELAANDFKYWELMRRACARGLKVFDYGRSK
QNTGSYAFKKNWGFEPTPLHYEYRLYKSDSVPQNNPSNAKYRLLIAAWRRMPIQLTNWLGPKIVRNLG
>gi|319761459|ref|YP_004125396.1| sugar transferase, pep-cterm/epsh1 system associated [Alicycliphilus denitrificans BC]
MAAASNILYLVHRLPYPPNKGDKVRSYHLLRHLQKSHRVFLGTFVDDPDDLQHLPTLRAMCSDLHVERIH
ARSAKIKSLSGILTGEALTLAYYRSAGMRQWVKQTAAAHDLRACVVFSSAMAQYAQMLLPQVPMLVDFVD
VDSAKWTQYAPAHRWPLSMLYRREGRHLLAYERAMAALAQRAYFVTTNETSLFLSQAPECAGRVQSMGNG
VDSDFFAPHPLRESPFAAGEQAIVFTGAMDYWPNIDGVSWFVADMLPHLVARYPQVRFYIVGRSPSPQVQ
ALASPHVVVTGTVPDVRPYLQHANAVVAPLRVARGIQNKILEAMAMQQPVVTVTSCADAIGATAEQGVLR
ADAPEEFVQVLQSLLESPTSVAELGRKARSYVEHACSWQAHLGTIDSCLGNAGAAHAGGAGA
>gi|319761460|ref|YP_004125397.1| exosortase 1 [Alicycliphilus denitrificans BC]
MPVVPEHEDARMTGSIRSIPAHWRRPLAALVLLQAAILAIYWHSAWGMAMIWARSDTYAHGFVVPFIALW
LVWRQRAALAPMVPRPGRLAWLLMAGAAALWLVGDLVSVNAATQLALMMLIVLSVPAVLGWRITRALAFP
LGFLFFAVPIGDFLMPRLMEWTADFTVLALRVSGIPVYREGLQFIIPSGTWSVVEACSGIRYLIASVTVG
CLFAYLSYHSMRKRMVFIGVAIVVPLVANWLRAYLIVMLGHFSGNTIATGVDHLIYGWLFFGLVIGIMFL
IGARWVDPTPPLKAPAPGSLVETSYSNRWPWFALSLPFVVVLAPHAVLAIMNLGTKTAPVQLARPIVAAP
WHAAAMPPSTWVPAFQNASAELHMGLADAQGRPLGLHVSYYRQQNYERKLVSSENVLVHSLDPVWARVTS
GSANVQMQGKVLRVDSAVIRQHARGMVGAGERLLAWRFYWVHGTFTASDYAGKIQGALGRVSGWGDDGAN
IVIYTPLSDAKEAETDASALLQSYLDSQGDALTQALRQTRGRD
>gi|319761461|ref|YP_004125398.1| exosortase 1 system-associated amidotransferase 1 [Alicycliphilus denitrificans BC]
MCGISGIFDTRGTSTIPRDLISRINNIQSHRGPDENEVHLEPGLALGHRRLSVIDLATGTQPLFNEDGTV
GIVFNGEIYNYLELMQELKDLGYRFRTRSDTEVIVHAWQAWGEACVHRLRGMFAFALWDRKHQTLFLARD
RMGVKPMHYAWLPDGSFIFGSELKVLTAHPGFVRDIDPLAVEGYFSFGYVPDPRCIYQNAHKLPAAHTLT
LRRGDAGRPVPRPYWDVRFTNDNPIKLQDAQAELRERVRESVRLRMIADVPLGAFLSGGVDSSAVVATMA
GLSSAPVHTCSIGFDDPRFDESSFAQQVADRYRTDHRLDIVSSDDFDLIDTLAWLYDEPFADSSAIPTYR
VCQMARKHVTVALSGDGGDESIGGYRRYRMHLGEEAVRGRLPLALRRGMFGPLGRWYPKADWAPRSLRAK
TTFQALAMDSVQAYCHSMSQLRGDERRALFSPAFQRSLGGYGALEVFRLYAGQAQTEDSLALIQYLDYKT
WLVGDINTKVDRASMAHSLEVREPLMDHLLVEWLATLPSDFKIRAGQGKVIFKQAYEPLLPRDVLYRPKM
GFSVPLAAWLRGPLKDRVRLALLGERMRDCGYFNPVTLRRLVDEHNSGLRDHATALWMLLMFEAFLRLNE
GAALHG
>gi|319761462|ref|YP_004125399.1| sugar transferase, pep-cterm/epsh1 system associated [Alicycliphilus denitrificans BC]
MAKADRVRVVHVVHSFGVGGLENVIVQLINRLPPARFEHVVLALTTVSEFRQRVVRPDVRFIALHKPPGH
AVPLYPQLYRLLRELRPHVLHTCNLAALEVVPLAWLARVPLRVHAEHGWDVHDPQGRNPRYQCLRRLYRP
FVSHYVAVSRDLDDYLGQAIGVPARRRSLIANGVDTDTFTPAQGVRVVPGCPFEPGRHWLVGTVGRLQTV
KNQPLLARAFVRALQDNPVMRDAARLVIVGEGPLRAEVGRVLAEAGMGDLAWLPGARDDVPEVLRALDLF
VLPSQAEGTSCTLQEAMASGLPVVATTVGGTPDLVQEGVTGHLVPPDDEQALAAAIVRTFDDRDAAARQG
KAGRECALRSFAIGAMVRQYQQLFDREESA
>gi|319761463|ref|YP_004125400.1| glycosyl transferase group 1 [Alicycliphilus denitrificans BC]
MRILHVLDHSIPLHSGYTFRTAALLREQRALGWETFHLTSPKQGHTDEAVQTVDDLSFYRTPVVKNSFSS
LPLAGQWQLMEQLTRRLREVAKKVRPDIIHAHSPVLNALPAIRVGRELGIPVVYEIRAFWEDAAVDHGTT
HEGSARYRLTRALETRAIRRADHVFTICEGLRSDIADRGIDPAKITVIPNAVDTHAFQASQSSDPALKHS
LGLDGKVVLGFVGSFYAYEGLDLLIEALPTILQANPAVALLLVGGGPEEARLREQVARLGLEGHVVFSGR
VPHKEVGRYYDLIDVLAYPRHSMRLTELVTPLKPLEAMAQQKLFVASSVGGHRELVEHMKTGVLFKADDK
HELTQAVLDLLASPRIWPELKANGRAFVESVRNWRNSVANYKPVYERLTRSEARL
>gi|319761464|ref|YP_004125401.1| udp-n-acetylglucosamine 2-epimerase [Alicycliphilus denitrificans BC]
MKVMVVFGTRPEAIKMAPLVKALQQAASALQTVVCVTAQHREMLDQVLRLFDIQPEYDLNVMKPGQDLFD
VTTNILAGMKPVLTVERPDLVLVHGDTSTTLAASLAAYYVRASVGHVEAGLRTGNKWAPFPEEMNRRITG
AVADIHFAPTTAAKANLVREGVVEDRIHVTGNTVIDALLAVVDKLRANAALRQSLDEKFSFLKPGRRLIL
VTGHRRENFGEGFQNICHALADIASAHPDADVLYPVHLNPNVRQPVRDILAARRLGNVHLIDPVDYLPFV
YLMDRSYLIITDSGGVQEEAPSLGKPVLVMRDTTERPEAVQAGTVRLVGVDRRKLANEATRLLTDTAVYA
AMAQAHNPYGDGLAAQRIVKALLEIKKERLHGT
>gi|319761465|ref|YP_004125402.1| nucleotide sugar dehydrogenase [Alicycliphilus denitrificans BC]
MAREFQKIVVMGLGYIGLPTASMLATKGHQVLGVDVNAQAVDTINSGRIHIVEPDLDILVKSAVNSGNLK
ASLTPEEGDTFILAVPTPFKEVDGNPKAPDLAYVEAATRIIAPYLREDNLVILESTSPVGTTERVQEIIF
SMRPELAGKIHTAHCPERVLPGQILRELVDNDRIIGGTTKAAVAKAKALYKTFCNGAILETDSRTAEMSK
LVENSFRDVNIAFANELSVVCDHLGINVWETIALANRHPRVNILQPGPGVGGHCIAVDPWFIVASAPDEA
RLIRTAREVNDAKPDWVIAKVKAKAARFHEPVIGCLGLTFKANIDDMRESPSIDIVAHLNQLGIGKIMAC
DPNVRKEKAPFPLYDLKSVIKEADILLLLVDHDEFKDIDPQVIKDKVVIDTKGVLR
>gi|319761466|ref|YP_004125403.1| glycosyl transferase group 1 [Alicycliphilus denitrificans BC]
MACPGAPVKILLFSTLYPSAVRPIHGIFVETRLRELLKTGEVQARVVAPVPWFPSKSQRFGAYARFAATP
RLEQRNGVEVHHPRYLLPPKVGMSVAPYALALGALPTIRRLQRQGFDFDLIDAHYYYPDGVAAALLASWL
HKPFVVTARGSDLNVITQYAFPRKLILRTAEQAGASIGVSQALMDRLAELGADRSKLNTLRNGVDLERFA
PEDRAEARQRLDLPVQGGYLLSVGNLVELKGHHIAIEALTHLPEVTLLIAGAGPEEGALKALAQRLDVVK
RVRWAGVVPQAELKWWYSAADALVLCSSREGWANVLLEAMACGTPVIATNICGTPEVVSSPAAGTLMASR
DAQALVAAWSRLHGQLPTREETRAYAHTFSWDATTQGQLQLFQRIADAWALSGAQSVG
>gi|319761467|ref|YP_004125404.1| hypothetical protein Alide_0751 [Alicycliphilus denitrificans BC]
MEALILVIDMGFMLYLCWRVFRSRDGQDIDLGFLRYDKTDTRH
>gi|319761468|ref|YP_004125405.1| wzy family polymerase, exosortase system type 1 associated [Alicycliphilus denitrificans BC]
MRDLSFALMLLAVLPLALVRPFNAYLLWGWTGMLAPTTYFYGFMVGARVNFVFAVLTLVFLLLGRVPWRN
YQGNMVTWLYLLFAVHATLSFWLGYAGNPFDEQYYEILIKGLLFALVMPFFVRERVHFHAMFIIIALGLG
IHGVLNGLKTIASAGGNLMLGPAGTMLADRNHLSTALALVLPLLLYLQTYTANRLIRLGYLGAVCVVVLA
ILGGGSRAGFIAVSVVGMWLVLTTRRKGLALVLVVAAVVGFLAFAPENIMERMSTIKEADDDSSFMGRVY
AWRISSAIALANPFFGGGFHAVQIQSIWDTFKASPGLLGFLHLPVPEFSAKAAHSIYFEVMGDLGFVGLG
LFLFILLRALWSRQTIKRSTLRLGASYQWARDMADMLMLAVLAYMVGGAAVSVGYFEVIYMVVMLMELLR
LNVKRALADSTRQAATLMAVP
>gi|319761469|ref|YP_004125406.1| polysaccharide deacetylase [Alicycliphilus denitrificans BC]
MISRLVLQSLSKDKLSVFLFHKVPQRCDQMVPVDVDMARFEHLLDYTFSQLRVLPLEEAVSRLHSGHLPR
RAACITFDDGYPDWLTGVAPALRRRNLHATFFITSGQFDGVPLWHERILAAVRRLQGPLLDLGIPFLPAQ
SVASLDDRRRQVQRLEQELKYLTLNRREQILRQLEAVAGVRAADVPVMSEAQLRDLHSQGFGIGAHTALH
PILDYCNAEEAVREIGGARERLQTIVGGSVNGFAYPNGRPYADFSRLHVDAVKRAGYRYAVTTHWGVADV
CTSPFQIPRFTPWAEHDWHVTYQLVRNLMTEPTQVPEVAV
>gi|319761470|ref|YP_004125407.1| polysaccharide deacetylase [Alicycliphilus denitrificans BC]
MSVVAALKDGARTALYRAGALGAWHRWRNRRALTVLMFHRVLPANDPAFALAEREFTFTLDGFRRTLDFV
QRHYSVVSLGDLQAARLGRAALPLNPLLITFDDGWRDTLTHAVPELARRSLPAVLFLASEVVTLDGPRWW
QDALVAAMAKPGATDRLCATAGWSEAPKGSASQALAAHLGALPEAARRAWLERHAPGVLNQIAERQMVTL
DELQAMKEGPLAIGGHGHTHSPLTLSPDPEAELQTSQRMLDVLNQTVRSMSFPHGAWSSELAAMARKSGF
DWIFTSDAVLADMSRLPSPLPALGRIHVPENAWTCRAGDIDPARLATFLFSRPLQHF
>gi|319761471|ref|YP_004125408.1| hypothetical protein Alide_0755 [Alicycliphilus denitrificans BC]
MLMNIDRLRIQRKSFNRLTAAERDGWARLLDESTSSRWAFLSPTFAEAVAATVGPVDVLLCWSGDELVGV
MPLQHSAGWLGRLGLREPVGRQMTDYFGLLARSGVRLDWPSLLKAADIPCLYFTHLDESQATHGLVGDSP
KKGLRNHIHPDGGEVYWELLRNRERKVVSEIERRERKLVAEHGPFTFEMQSTSPVQDLQSLVDLKNAQYL
RTGHDGGALLDQANVRLLNRLLASRDPHCLPRLSVLCCEGQLVAAHFGLQCGSVLHYWFPAYNNQFSAYS
PGRVLYRHILLNAQLFGIGCIDHGEGDTVAKRDFANDEHQYFKGLVHASPWGQALGFVQRLRWRFAA
>gi|319761472|ref|YP_004125409.1| glycosyl transferase family 2 [Alicycliphilus denitrificans BC]
MNHLRVSVIIPVRNGKDFLQEALDSVLQQSFTNLELLLIDDGSTDDDYDRYALQDPRIRVIHLPGMGVSR
ARNVGMAQSRGDLLAFLDADDVWFPGKLQAQVSYFDAHPDVGVVFGKFIRWQALPSGGFAPASSLMQDAG
QLNCADPERSGWLYTRLLDGLLVGMNTAVVRRTVYEAIGGFNEALRQGEDYDFWLKASRVAEMHSLNGPV
ALYRIHGASAMHRLSPENHLVNLLNAAVTRWGLNSFEDQALTLRSFHERLARVYFDHAYAHYWHGDRAIA
RAAFWQALRRGHHPLRCLAYITLSYLTGRATASLP
>gi|319761473|ref|YP_004125410.1| polysaccharide biosynthesis protein [Alicycliphilus denitrificans BC]
MLSVRQKVALQFLVSNLALVANFALSIVLARLLTPQDIGIFSMSAVLMAVAHVFRDFGVTAFIKREKELT
PETLRNAFGVLLTTSWSVAAVMFVSAPYWAQFFHESRVMPAVQVLALGFVFIPFGAIPMAVLQREMAVEK
SARITAVTSVVYFGASVALALMGFGPMTMAWANLVNIITTGAMARWVVGRPLPWLPGFRQIGDIVHFGLG
NLLTALLKAADNALPDILLGRWMTPAAVGLFSRANSTVNMVGTALLPTVNFFALPYMAKVHHSDGPVASE
FLRASSLINSLMLPAFAVIAVLAHDIVSLLYGRAWLEAVPAIPWLCLSYAISSLFTLSAPALTGVGKPYA
AIGPNAMLVTAKTAVAIWLMDGTLHTFALAIALGQLLSVPYYLWIHERYLGLRWIAWIKSTMSLVLQALL
VGSICLGIRQALPQDIAPWVAIGVTGMGALLAFLVGCLLLRLPMADELQRLQHALMQRRRNP
>gi|319761474|ref|YP_004125411.1| nucleotide sugar dehydrogenase [Alicycliphilus denitrificans BC]
MNLSSATIAIIGLGYVGLPLAVEFGKHRNVLGFDINPARVAELQAGRDHTLECSGEQLREACHLRYSHQP
EDLKACQVFIVTVPTPVDQANRPDLTPLVKASQIVGAALKSGDVVIYESTVFPGATEEVCVPELERMSGL
KFNQDFFCGYSPERINPGDKDHRLPSIKKVTSGSTPEVAGAVDALYAQIITAGTHKASSIKVAEAAKVIE
NTQRDINIALMNELSLIFARLGIDTLEVLQAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQEVGYHPD
VILAGRRVNDNMARHVADTTVKLMLRKGIPVLGSRVLVLGLTFKENCPDLRNTKVVDMVHTLQGYNAQVD
VYDPWIDTKEALHEYGLKCLSAMPAPGEYAAIILAVGHRQFVELGEAGIKALGQANAVLFDVKSILPLGA
ADGRL
>gi|319761475|ref|YP_004125412.1| nad-dependent epimerase/dehydratase [Alicycliphilus denitrificans BC]
MSSRYQTVQSQLQATPKTWLITGVAGFIGSNLLETLLKLGQRVVGLDNFATGHQHNLDEVQTLVNGAQWA
NFHFIQGDIRILDDCRRAMTFLPLGEGRDGGQPGPIPVDYVLHQAALGSVPRSIEDPITTNSANITGFLN
MLVAARDARVQSFTYAASSSTYGDHPGLPKVEEVIGKPLSPYAVTKYVNELYADVFARTYGFNAIGLRYF
NVFGPRQDPDGAYAAVIPKWAAAMIQGKDVFINGDGETSRDFCFIENSVQANLLAATSADPAALNEVYNV
AVSGRTTLNTLFDELKLALAGNGISYVKAPVYRDFRAGDVRHSQADIGKAKKLLGYMPSHEIKEGISQSI
PWYIRFLG
>gi|319761476|ref|YP_004125413.1| sulfatase [Alicycliphilus denitrificans BC]
MKKSRVSLLAATRTLQRNWILFAVILLLTFLDIALLEKKYAIFSGGFLQANRISDIEGRLIFITTVLMLE
AAMAGCIWYFFILVGSWRETPLQSSKYLFLLVYGLGSVVLDAAKYKILSYFGDFISLAVLRNLGGGSIRE
ALLYGLEDGKLIGAGAALSIAICWYGYHRLKQRQQFVWTRDSIPISKWIVAGQMLLCLVCLIAISLVARS
NGNMRPHFSKITPYGLTNTTINNFIAPEPSALDLLLKIAKGAPERPEHSYKVGFKNKKDNLVLVVSESTR
ADVLNESVNDRPVTPVWRSIALEGGVGKAYYSHTGFTTSSLKAIFRASLGHTLPLGGTLFEILKTQGYQI
VVLSGQDESFGHIERDSAAERMADIFFDARSAKDDRVFSSSAQGSLAISNKKILQQFDEISSQIDWQRPV
FIYLNLQSAHFPYYHQNMPLTVVSHPLERNQISEDTREQLKLTYLNAVAYSDWATGQLIDRLRKQGVYER
TLLTVSGDHGESLFDGGILGHGISITEAQLHTLLVTNRHLPILDGLIGQADLAIVLLQGIGAQVDPAPAL
QGKPVIQLIGDINSPSSLGYVYPHGERLTVNVDSAEVVASWLKSPVKVTDLRSDTREFQEVIQLTTEWRH
IAGI
>gi|319761477|ref|YP_004125414.1| hypothetical protein Alide_0761 [Alicycliphilus denitrificans BC]
MPVTFGQPFKAGDWQFTTQGLVAKVDGATIPLQADEIASHRDGSARFAVLSAQLSNLQPGQSKIINLYRG
AKSTSTPSVPSNPDWNLELEAQVYDANGSVTTLVAQPQADLVKQIANGSGRRLAGAVATEYTVALPFKNK
ATGATHPHLTARLHARLIDGGQRIRTDVVMENTRTWTTSPGNITYSLAVKRNGSTIYTQPKFTHYHHARW
HKVLWTGSSPEPQVRVRHSMPYFLASKAIWNYDLSLTIPESVLSGFYSQYTQSKASQANLGPMANLLLTP
AFGTTGGRPEIGPVPQWTAMYLISQDERMKEVMLAHADAAGAVPIHYRDESSNQPLDLDRYPNVATWRGT
SQPALPAVVNGTTIWDPDTSHQASFAYVPYMITGDAFYQDEMAYWAGWNLTAMNPAYRSGGQGLLWEDQV
RGQAWSLRALGEASRILPDSHAMKAYFQSRLSNSLEWFYQNWVVSPLPDVSPMGSPVNPYSTGTVGPWQN
DFWAIVMAQHVEAGEPKAKELLNWVSKLGVGRFQNEAQGFCVAKAPAYYLQLKNASGQWITTWREFAQVN
FPGVACSSSLPVEPDSYPASAGGYSANARAMLAAVSSVDVPGAASAYTLWKSKTPLVDKDFLNNPTWAIV
PR
>gi|319761478|ref|YP_004125415.1| hypothetical protein Alide_0762 [Alicycliphilus denitrificans BC]
MQESSAGSLCSLSNYYSCLYGPAGSARVIQDVSAARWQAAAQALRQLPGSSVLRLQPLDADSAWLAGLEE
GLRAAGYWTDRFFCFGNWYQPVPSGGFAGYWQQRPSALRHSVERGRRRLDRAGGTWHIDIIADASPGLDA
CLAAYLAVYAQSWKSPEPCPDFMPALVRMAAREGWLRLGVLWLEDQPLAAQVWLVCGGKANIYKLAYVKG
QERLSAGSVLTAALMQYAMDVDQVLEVDYLSGDDAYKRDWMAMRRERVGLVAFDPRRLSGLLAAGRHFAG
KTLRRR
>gi|319761479|ref|YP_004125416.1| hypothetical protein Alide_0763 [Alicycliphilus denitrificans BC]
MKALKTLVASAVLAMSTGAFAATVLPGSETSLQTIINNAYGGPGASPVSAAPNVNTNQAGAELFQIEASG
GSIATMILEIAGNANMNTFGIYDPYNTATQLQLFSGSASSGAQVAITVDASNQFKAVDLTNGGILGSMLF
TSSTFGYYLSGPGGTFFSQASQNGGNEQMVSYRGDGDTVQFPGRAVGVWGPSSYLLGWEDTSLTGGSDKD
YNDMVVYVESVTKVPEPGSLALLGLGLSGLAFASRRKQKNAK
>gi|319761480|ref|YP_004125417.1| alpha/beta hydrolase family protein [Alicycliphilus denitrificans BC]
MNVQEQPIHIAGDGFDMLGILTLPAPGMPMRRIGVVVVVGGAQYRVGSHRQFVRLARRLAAAGHPVLRFD
LPGMGDSPGEPVPFENTAPHVAAAVEAMLRAAPVRHAVLWGLCDGASASLLYMQATQDPRMTGLALLNPW
VRSEAGLARARVKHYYRQRLLEPDFWRKLASGGVGLAALRGAWNNLRAMRHTVAPSLSFQERMAHAWQAF
EGKTLLILSERDLTAQEFVEYTATQPAWSHALQRPGVSRHDIAGADHTFSQPAWQLQVEDLTLAWLGAMA
>gi|319761481|ref|YP_004125418.1| alpha/beta hydrolase family protein [Alicycliphilus denitrificans BC]
MSPRARAALPQAFFLATDTGQRFCLFHPPQGATPLGRVLYLHPFAEELNSTRRVVAGQARALAQAGYGVL
QIDLLGCGDSAGDFADATWAAWLHDAQQAHRWLDDHASGPLWLWGMRSGALLAAQLAALLQAPGTAPTHL
LLWQPVASGQQMLQQFLRLRAASQWLGAGSTGEPPPSQVLAQGLSIDIAGYTLSPRLAQGLAEAHMPAPG
SLPPGRLVWLETSSAQTPSLSPAAGKQLPAWHAAGWQVQAQAVEGPPFWQTVGTDEAPALVQATLAALAY
PSQA
>gi|319761482|ref|YP_004125419.1| hypothetical protein Alide_0766 [Alicycliphilus denitrificans BC]
MNLTEQVLHVLDNALSLQGRAASFDRDTPLLGSLPELDSMAVLAVITGLENHFAITFSDDELHGAVFATV
GSLCDLVEQSLARQAT
>gi|319761483|ref|YP_004125420.1| acyl-CoA ligase (amp-forming), exosortase system type 1 associated [Alicycliphilus denitrificans BC]
MLRMPQEPDFQRGIPPVLLHELPARAAACWPDRTALTVDGAHLSYAGLQSQIECCAAGLVALGLERGARV
AVYLEKRMEAVVSSFAAPAAGGVLVPVNPLLKAGQVAHILQDAEAQVLVTSAARLAVLAPALADCPGLRH
VVLCDEGAPGASAPLAGGIALHGWPDVLAGRPAGLPQVLDMDMAVIFYTSGSTGRPKGVVLSHRNVVSGA
VSVAGYLHNHADDTLLAVLPLSFDAGFSQLTTAFLVGARVVLLNYLLPRDVLQAMVRERVTGLTAVPPLY
MQLAAQDWPAAAAQHLRYFANTGGHMPRATLQRLRSLAPAAAPYLMYGLTEAFRSTYLPPEEVDRRPDSI
GRAIPNAQVCVLRDDGTECAVDEPGELVHRGALVALGYWRRPEETARRFRPWPPALLAAGGGWAAPELAV
YSGDTVRRDADGFLYFVGRRDEMIKTSGYRVSPTEVEEVLYASGLVAEALVYARPDDALGSVICAALLAS
PRASGRAGDDNAALMAHCSKHLPAFMLPKVLQWVEQPLPRSPNGKLDRQRWMLEHGSI
>gi|319761484|ref|YP_004125421.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Alicycliphilus denitrificans BC]
MDQFDTTHDELQVGGLPLSLLAERVGQTPFYAYDRSLIAARVAGVRQVLPQGVHLHYAIKANPMPALVGF
MRPLVDGMDVASAGELKLALDAGADPRTIGFAGPGKRDAELRQAVAAGVLLHAESARELEVLAASAQALG
RSARVALRINPDFELRGAGMHMGGGPKPFGIDAEQVPAMLRAMARDGLAFEGFHIYPGSQNLRGSVIAES
LHRSVELVLRLAHDAPAPVRYVNLGGGWGIPYVAGEQRLDLAPVADALAQVQAALGRALPEAQMVLELGR
YLVGEAGIYVARVIDRKVSRGQVFLVTDGGMHQHLAASGNFGQVIRRNYPVVIGNRLQAAERESATVVGP
LCTPLDVLAERMELAVAQPGDLVVVLQSGAYGATASPQAFLGHPPCAEVLV
>gi|319761485|ref|YP_004125422.1| pep-cterm system histidine kinase [Alicycliphilus denitrificans BC]
MDGSESAVIHSGWAWAAVAYALLSLRLVQQEYLKKPVNRIAMAMLAAALLSVAWSGFSFLALTVNAAWWL
GAQSADILRYLAWGVFVFLFFNRSAGDISGPWYRWWPGLAVLAVLGAPPLVMGMHALAGPAGHVFVMVLL
AVAGLVLVEQLFRNLPEDALWSAKPVCLGLAGTFLFDLYLFSQGLLLQGLDPDALKVRPFVHALMVPLLL
LATTRHRNWIAKIRVSRKVIFHSATLVLVGLYLLFMAGVGYYVRYFGGEWGGALQLGLVFVATVLAIAFV
LSGSLRAKLRVFLGKHFFRYRFDYREEWLKFTATLSSQDQPQEAGRSVIRGLADMLESPAGALWLRRPED
DPYRQVARWNLAPATQTVDRHADLLEFMRATGWVINLEELRAEPARYNDLRLPEWLAEYPQAWLLVPLWQ
GKDLLGFVLLASPRTRVDVNWEVIDLLKTAGHQAASILAQMQATEALLESRKFEAFNRMSAFVVHDLKNI
VAQLSLMVKNAKRLQNNPEFQADMLMTVENSLERMRQLMQQLRQGAASGAVSAGVDLGKIAERLAAEALG
RGRTVQLEASSQVFTRGQADRLERIIGHLLHNAFDATDADGRVWVKVDRFGSHARIEVGDEGQGMTEEFV
QTRLFKPFQTTKEAGMGIGTYESFQYVQELGGKISVDSKVGRGTVVSLLLPLIEISRDSDLHL
>gi|319761486|ref|YP_004125423.1| pep-cterm system response regulator [Alicycliphilus denitrificans BC]
MSTDKLQQPLLVVEDDLALQKQIKWSLDRFESVTAHDRESAMTQVRRYSPAVVTMDLGLPPDADSVSEGF
KLLEQILAAAPDTKVIVLTGQNDQSNAVKAVGMGAYDFLAKPFEPEVLNLCVERAFRLHHLQAENKRLRA
MQMPDALSGLVTRDPQMLRICRTIEKVASTNASVMLLGESGTGKEVLARGLHQQSNRKGNFVAINCAAIP
ENLLESELFGYEKGAFTGAAKTTPGKIETAHGGTLMLDEIGDMPMPLQAKLLRFLQERVVERVGGRQGIP
VDVRVVCATHQNLAQCIKEGRFREDLYYRLAEIVVEIPPLRARVGDAALLAHSFVRRFGGEHGRSLTLAD
DALRAIESYSWPGNIRELENRIKRATIMADGNQLTADDVGLAGADGTEDDRSLDLRLTREAAEQRAVLAA
LARADGTVAKAADLLGVSRPTLYDLMHRLGLKI
>gi|319761487|ref|YP_004125424.1| pep-cterm system tpr-repeat lipoprotein [Alicycliphilus denitrificans BC]
MTAITSRTLVPAAALTVALLMSACGRDDPDALVASAQDYLSRNDAPAAIIQLKNALQSRPDSAKARLLLG
QALLDTGDAQGAETEFRKAQDLGVPPAEVVPQLALALLRSRQYSKITSDYAGQQLADAQAQASLQTTLAI
AWQRQGDEAKAQGSLGEALKAKADYAPALIEQARSKVRGGDVDGALAGLGQIPRQSPVGAEALKLRGDIL
LHSKRDADAAMAAYRDALEVKPSYVEGQAAIVELLISQGKTTAAAESLQALEKAAPGRPQTLYLQAMLAY
TKGDFKAAQESVQKLVRMAPESARALELAGMTDLQLGANAQAEASLAKALQLNPGLAMARRGLVTSYMRL
GRLDKAIATLPSDIDGNDRDPGMLGLAGQAYMLQGDVDRAQRYFARASRLVPNDAVMRTSLAVSHLASGK
GDAALGELRSIAASDEGVVADMALINALLQERKVEEALKAIDLLEKKRPADVLPVFLRGRALLLKQDTAG
ARKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARARIEAAIKRDPGNVQAYMVLMELRAANGADRAEL
AGILRKAVDGAPSSPIPRQLLVDHYLRGGETKEALAVAQQAVAALPDNAQLFDALGRAQSANGEHNQALA
SFNRMAALQPQSPVPYLRMAGANLIAGDRTAAGQSWRKALEIDPTALEAQQGLVRLAMADRKSGDALAMS
RTVQKQRPKEAAGYALEGEIHMAEKAWDKAIDVFRVGLKQVPASGELAVRLHEVLVTAGKKSEADRLAAE
WQRSHAKDATFPLYLGTRALAAKDLPESLRQYERAVALQPNNAIALNNMAWIKGQLGRDGALADAERANA
LAPNQPAFMDTWAMLLSAASQHARAVDLQKRVVQLRPQQLEFKLNLAKIYIKAGQKDAAKAVLDELAAAG
ARFPAQAEVEELRKAL
>gi|319761488|ref|YP_004125425.1| peptidase s1 and s6 chymotrypsin/hap [Alicycliphilus denitrificans BC]
MPPRRVALWALAWLLQCLWAGGALAQLPDTIERVKPSVVLVGTYAATDNPRFRYVGAGFVVGDGLRVVTS
AHVVTRMNMLSPDGQALAVQVRSGPVAWLMRKAKVMELNLEQDLALLQIEGPPVAALKVASSDHVREGDE
LAFMGFPIGGVLGFASVTHRAGVASITTMALPSPTSQQLSERAILSLRAGPVQVLQLDATAYPGNSGGPL
FDPRSGAVLGVISMVHIKSTREAAMSQPSGISYAIPSRYVLELLARHPS
>gi|319761489|ref|YP_004125426.1| translation initiation factor if-1 [Alicycliphilus denitrificans BC]
MSNKEELIEMQGKVDEVLPDARFRVTLDNGHKLVAYSGGKMRKHRIRVLAGDTVSLELSPYDLSKGRITF
RHLPPRAGGAPRAPARPRR
>gi|319761490|ref|YP_004125427.1| 2og-fe(ii) oxygenase [Alicycliphilus denitrificans BC]
MPNPPIDDLFGDEPAALPLGAQAVLLRGFALAQAQALVQGVRQVALRAPWRHMQTPGGKAMSVAMTGCGP
LSWVSDRRGYRYADRDPLTGRPWPAMPAAFARLARAAAQQAGFAHFAPDACLVNRYEPGARMSLHQDRDE
RDLAAPIVSVSLGLPAVFLWGGATRGERALRVPLHHGDVVVWGGVDRLRFHGVLPVAPGEHPATGSCRIN
LTLRKAL
>gi|319761491|ref|YP_004125428.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MNIAQLLQRSALVHGDRPAVLAGARLLHDYRQLAARVAALAGHLRGRCGVQAGERVAIFSANCPEYLEAL
HAIHWAGAISVPVNYKLHARELAHVLSDSGARVVCVSGALKGDALAAGAGAAALQVLGDAAWEQAAQGAP
LPLQECAPEDVASLFYTSGTTGRPKGVMQTHRNLLAMTMAYFTDVDDVRHDDAMVYAAPMSHGAGLYNYA
HMLRGARHVVPESGGFDPAELVRLAAGVGRLSLFAAPTMVHRLVEHVRSTGADAGGFKTIVYGGGPMYVE
DLRRAIDAMGQKFVQIYGQGESPMTITALAREHLADTAHPRWAERIASVGVAHSCVQVRVVDGQDRPVPA
GEPGEVVVRGETVMAGYWGNAEATAQTLRGGWLHTGDVGQLDEHGFLTLRDRSKDVIISGGSNIYPREVE
EVLLQHPRVREAAVVGRRDAEWGEVVVAFLVADGAPVPDAELDALCLAHIARFKRPKAYRWVQALPKNSY
GKVLKTELRALP
>gi|319761492|ref|YP_004125429.1| oxidoreductase fad/nad(p)-binding domain protein [Alicycliphilus denitrificans BC]
MATHTVKLQARQPVAEGTMAFHLEKPAGFEFRPGQALEVILPGGAQGEDGRHAFSIVSAPHEAELVFATR
MRDSAFKRALAALPLGASLDIDGPFGSLTLHKKAERAGVLVAGGIGITPFMSMLRNAAEQHSEQSLVLLY
SNRRPEDAAFLAELQALAQRHPKFRLVATMTGMARSQQAWDGATGYIDGAFVQRAIEGLPEPIFYVSGPP
ALVEAMRGVLVDDAGVDEDDVRSEEFYGY
>gi|319761493|ref|YP_004125430.1| hypothetical protein Alide_0777 [Alicycliphilus denitrificans BC]
MASPNAPFFPIIYVRGYAMTEREQDETTADPFCGFNLGSTVYRATPDKTKPAKKFVFESPVLRLMSDFGY
ADVYDNGLDILDGEWEGSISLRSIVIYRYYEQASALLGTGRTPDISQFARGLSDLVLRVRDLACANPDNR
LAPEDFRCHLVAHSMGGLVCRAFLQNPDLGDDQARASVDKVFTYATPHNGIDVAGINVPQWLSAADMNNF
NRENMARYLKLEALYKKTQRVDWLPEEAFPSERFFCMIGTNRSDYDVALGLSRTFAGHGSDGLVRIENAS
VWGVNARGRFSAPCATAYTYRSHSGYFGIVNSEEAYQNLTRFLFGDVRVDIWVDIDSVQLPPEIQGKAVN
ALYQFELLASPRGKRWYLTRRMAEEDSVACRSHQDLVDPEKKDARSIYLSTVFLANRARVNPARPSLAYG
MTLGVRVPDYEVERKFWADTHYEGGYLFRDTVIVEMVPPQTPGDAWTTRFGWQSDNVGHATESLAYRTLK
TGKQVMTIAFGNDNAPGIAGRVRFVVSAWNAPADDQ
>gi|319761494|ref|YP_004125431.1| peptidase m15b and m15c dd-carboxypeptidase vany/endolysin [Alicycliphilus denitrificans BC]
MRIEEMIAAVQARLGIEVDGKAGPQTWGAIYERLVGKKIDGQAPEQAIAPVDPRSEKVIATLLPQVQPMA
RALVQKAAASGIAIRVISGLRTYEEQDALYAQGRTAPGSVVTNARGGYSNHNFGIAFDIGVFEGNRYLGD
SPKYKAVGVLGMDLGLEWGGNWKTIVDQPHYQLRPAWAADLSERQMLAEMRARHASGSPVFA
>gi|319761495|ref|YP_004125432.1| dsba oxidoreductase [Alicycliphilus denitrificans BC]
MTTPAAPITLKIDFVSDVACPWCAIGLAALAQAAGRLLGQVLLDWHFQPFELNPGMGPGGEDLLEHLAAK
YGAAPEQLRQTQQQIAARGAALGVVFSPRRTRIYNTFDAHRLLHWLGEQGAAGQQLAFKQALFKSYFTDA
ENPSDPAVLLRLVREAGLDEARARAVLESGEYADAVREREAFYQERGIHSVPAVIVDGRHLIQGGQPVEV
FEQALRRIAAQRV
>gi|319761496|ref|YP_004125433.1| crea family protein [Alicycliphilus denitrificans BC]
MRTLRAACMAAAALLVAGTCAAQPDKIGTVDTAFQWIGRDHDIVVEAYDDPLVQGVTCYVSRARTGGIKG
TLGLAEDRAEASIACRQVGPIAFAQPLKAQQEVFSERMSLLFKRLRVVRMVDAKRNTLVYLSYSDKLIDG
SPQNSVTAVPVDRATPIPLK
>gi|319761497|ref|YP_004125434.1| cyanophycin synthetase [Alicycliphilus denitrificans BC]
MQITRIRALRGPNLWTRSTAMEAVVHCEPHEGDYRTLPGFEDRLRARFPKIGALHPHGADQRLSLAHVLE
VAALSLQAQAGCPVTFSRTHETVEPGTSQVVVEYTEEAVGRQAMEQAEALVRAALDDTPFDAAAVVARLR
ELDEDERIGPSTGAIVDAAVARGIPFRRLTSGSLVQLGWGSQARRIQAAELDVTSAVAESIAQDKDLTKR
LLHAAGVPVPLGRPVADVHDAWKVAEEVGLPVVVKPQDGNQGKGVTVNITTRAQLEAAYATALQYGDEVM
VERFLPGHDFRLLVVGHQLVAAARREPPQVLGDGVHTIRELVDIVNQDPRRGSGHGTALTKIRLDDIAIA
RIAAEGLAPESVPAQGQRVVLRNNANLSTGGSATDVTDDVHPEVAARAIEAAQTIGLHICGVDVICESIL
RPLEEQNGGIVEVNAAPGLRMHLAPSFGRPRNVGVPMVDALFPPGQDGRIPLVAVTGTNGKTTTTRLIAH
LFTAHGWRTAMTNTDGVYVNGRQIDSGDCSGPRSARNALAHPEADAAVLECARGGLLREGLGFDRCQVAV
VTNVGEGDHLGLNFIHTVEDVAVLKRVIVQNVAQDGYAVLNAADPHVAAMATSCPGKVIFFAADRHHPVM
ATHRAQGNRVVYVDEGHIVAAEGSWRESVPLREIPITRGGAIGFQVENAMAAIAATWALGLPWQTIRRGL
AGFVNDSDNAPGRFNVMDYRGATLIADYGHNPDAIRALVQAVDAIPARQRSVVISGAGDRRDQDIVEQTR
TLGAAFDDVVLYQDACQRGRADGEVLALLKQGLEGAPRTRYVTEIHGEFVAIDHALERLQPGDLCLVLVD
QVEEALAHLRRRCGEAAGAAGAA
>gi|319761498|ref|YP_004125435.1| cyanophycin synthetase [Alicycliphilus denitrificans BC]
MATFKDIQLLRATYLRGPSVWTYRPILEVWLDLGELEDYPSNKLPGFNERLTRWLPDLVEHTCGVGERGG
FIQRLEGGTWMGHVLEHVVIELLNLSGMPAEFGQTREISRRGVYRMVFRCPEEAVARVALDCGHRLLMAA
INDQPFDLKAAIHAIKTAINDRYLGPSTGCIVDAASERRIPHIRLNDGNLVQLGYGAAQRRIWTAESDQT
SAIAEGIAQDKDFTKRLLAACGVPVPEGRIVKNAEEAWEVAQEIGFPVTVKPSDGNHARGVTLELSREAD
IKAAFALAEPEGSDVIVEKFIDGIEHRLLVVGGKVVAATKGETVSVHGNGQATLRELVAVLNQDPRRGPE
QEYPLDWINLEAGAVQLELKRQNVTPDSVIPQGQSVLLQRNGNMAIDCTDDVHPDVAYYAQLAAKIVGLD
IAGMDMILKDVSQPMQGQGAILEVNAGPGLLMHLKPTSGAPRPVGMAIADHLFPREDGPGAGRIPLVGIV
GTRHNAFIARLVGWLLQLSGKLTGVASSEGMFLANRRTQKSDTANWAGAHRLLTNRLAQAAVIQTTARSI
LEEGLAYDRCLVGVVTDMDGYESLADHDVLEQAKMTRVLRTQIDVVLDEGAGVLNADIAQVAELSALCDG
EVLLYSTAADNPAIAAHRANTENGGEGRAVFVRGEQVILATGAGERALGTLAALSLAGGQRPDTPALLAA
IAAAWSMDIAPDLIAAGIKTFEYPGA
>gi|319761499|ref|YP_004125436.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MQHHHSVDALGVLPGPFGAGLRAALASDENVQAAFEVDLTPGLRFAPGLLVLTDRRLLAQGTDAAAQEWP
LAPGMALRMLDHGGVGTLELHDADRRLALWRFTLGRHPQALHLQQRLERQLALLENPQAVAAPEEEDTPR
CAACGTPLPPDSDECPACARQQPPRASTWVLLRLWRFARPYRKQLAAGFALTLASTAASLVPPYMTIPLM
DDILIPYQSGQQIPTGMVMLYLGGLLLAALLAWGLGWARTYILALVSERIGADLRTTTYEHLLRLSLDYF
GSKRTGDLMARIGSETDRINVFLSLNALDFATDVLMIVMTSVILFSINPWLALVTLVPLPFIAWLIHNVR
DRLRTGFEKIDRVWSEVTNVLADTIPGIRVVKAFAQESREAQRFRAANQHNLEVNDRLNKTWSLFAPTVS
LMTEVGLLVVWGFGIWLVARNQITVGVLAAFIAYIGRFYTRLDSMSRIVSVTQKAAAGAKRIFDILDHVS
NVPDPANPVRVDKVEGAIEMRDIGFRYGSRTVIRNLSLDIRPGEMIGLVGHSGSGKSTLVNLISRFYDVS
DGAILVDGVDIRRMAVSDFRRHIGLVLQEPFLFFGTIAENIAYGRPDATRDEIVAAARAAHAHEFILRLP
HGYDSLVGERGQGLSGGERQRISIARALLIDPRILILDEATSAVDTETEKEIQKALDNLVQGRTTIAIAH
RLSTLRKADRLVVMDRGEVVEVGPHDELMAQQGAYWRLYEAQARRAEEDAEAAGVRVESTRQHSAHPAGK
>gi|319761500|ref|YP_004125437.1| hypothetical protein Alide_0784 [Alicycliphilus denitrificans BC]
MNTTTTTPVPLDLWRNPHGRLMLRLAGGTEPVAVTPVRAFPIAAPLEGLSLVGPDGHELAWVPRLDALPA
AARALIEEEFAAREFVPTITRIRSVSSFSTPSTWEVDTDRGAAQLVLKGEEDIRRLAGRTKLLIAASDGL
QFHVPDVTALDRASRKLLERFL
>gi|319761501|ref|YP_004125438.1| hypothetical protein Alide_0785 [Alicycliphilus denitrificans BC]
MQLPPVVRSPPQWRPQGADLYSTGASGAAPVRPVNPANPVESMDRLGEGAIVREPTKPTAPDEENRDWTL
AEARKEAPKEAEEPPKEPIYKQLLELIQSMWRASGSAVELAQDINKTTLQERLAQQVQDRQSPTYSDPKV
KRTGGL
>gi|319761502|ref|YP_004125439.1| small gtp-binding protein [Alicycliphilus denitrificans BC]
MTTVSPSPVAHIRTLALVGASAAGKTTLAEALLHASGAIGTVGSVERGSTVSDHDPQEIKTQHSLQSSVM
HLAHGGCRIHLVDAPGLPDFIGQSLPALEAVETCAVVINAATGIEPMARRMMDYAAERRQDRLIVVNKID
AEGVQLAALLVDIQAAFGAECLPLNLPDAGATRVVDCFFNREGHSDFGSVADAHRALVEQVVDVDGDFVE
RYLNDGDIDAGELHAPLEQALREGHLIPVCFVSARSGAGVPELLDVITRLLPNPAEGNPPDFFKGEGECA
ELIHARPDPAAHVLAQVFKISIDPYVGKLAFVRVHQGTITPSSQLFIGDGRKPFKVGHLFLQQGKDHVEV
PSAGPGDICTIGKIDELHYDAVLHDAAEDDHIHLRPLPFPVPVHGVAIRPRRRGDEQRLWEIMGRLVAED
PCLRLEHLASTNETVVYGLGELHLRMLLERLQAGYKFEVETRPPRIAYRETIGQGAAAQYRHKKQSGGAG
QFGEVHLRVEPLPRGAGFEFVDQVKGGAIPGQFMPAVEKGVREALAEGVIAGYPVQDIRVIVHDGKSHAV
DSKEVAFVTAGKKAAQAAIREAAPTVLEPVARLTITVPDGATGAVTGDLSSRRGLVSGTDTPRPGQVAIT
AQVPMAELLDYQSRLNALTAGQGTYTLALSHYEAVPPQVQQQLAGQYRAKEEQE
>gi|319761503|ref|YP_004125440.1| 5'-nucleotidase [Alicycliphilus denitrificans BC]
MALTLDDKLVVAISSRALFDFEEENRIFEHGDDRAYVALQLARLDVPAPPGVAFSLVRKLLAFNGAEHQR
VEVVLLSRNDPVSGMRVFRSCQAHGLPSVQRGVFTQGRDPFRYLRPLGAHLFLSANETDVRSALHLGYPA
ARVLTESVQAGDAHPHEVRIAFDGDAVLFSDEAERVYQSEGLAAFQRHERDKAAQPLPEGPFKPLLAALH
RLQQAGSADMRIRTALVTARSAPAHERAIRTLMDWNITVDEAMFLGGLPKGEFLREFEPDFFFDDQTGHV
DSAARHVPAGHVSSGIANAAAGAVQAAQAP
>gi|319761504|ref|YP_004125441.1| general secretion pathway protein f [Alicycliphilus denitrificans BC]
MPAYSFEALDSQGHLRRGTLDADSPKAARNMLRAQALVPLDVEALSPDTAPGSAPTLAQRLFTRPVFNAT
ALAIWTRQLAGLVGAGLPLERALTALADEADDERQRHLVAALRAEVNAGSTFARALAQHPREFSDIYCAV
IGAGEGSGGLGQVLESLADDLEARQQLRAKLIGAALYPAIVTLVAIVIVLFLVGYVVPQVASVFAGSKRA
LPLLTVLMLALSDFVRGYGWAVLSAFILIAAGARAALARPRFREKFDAAWLRLPLVGKLARGYNAARFAG
TLAMLAGAGVPILRALQAAAETLNNRALRADALEALVLVREGAPLASALAQKKRFPGLVAMFARLGEQTG
QLPTMLARAASQLGTEVQRRAMQLATILEPLLIVTMGLVVMLIVLAVLQPIIELNQFVK
>gi|319761505|ref|YP_004125442.1| luciferase family oxidoreductase, group 1 [Alicycliphilus denitrificans BC]
MTTQPLLSMLDLVAVREGGTVAQALEIAVRTARHAESLGFTRYWLAEHHNMPGIASSATAVLVGHVAGAT
RSIRVGSGGIMLPNHAPLVVAEAFGTLAELYPGRIDLGLGRAPGTDGATMRALRRDRVETEADFPRDVAE
LQQLLAPAQPGQRIVAVPGAGTQVPIWLLGSSLFSAQLAAHMGLPYAFASHFAPRLLQAAIDLYRQLFRP
SAVLLQPYVMIGVPVIAAPTDEEAEYLASSTYQRVLGIITGQRGLLRPPVENYLPGLPPAERAAIADFLA
VGVVGGPQTVRAGLRALAQATRADEFMLVSDVFDPELRLRSLEIAAQANNA
>gi|319761506|ref|YP_004125443.1| hypothetical protein Alide_0790 [Alicycliphilus denitrificans BC]
MGFFSRLFQPRADGLQAPSDWTRLPDSNASELVLFDEEARKLVAQFDIDAAIVTHQRWLPWLGEVLKGAR
DEHLRPEAVADDARSELGQWLHGSGREALGHFPAFDMLMRRHHFFHQQAAVLIRHAEAGETLQAEQAYKA
CQHASRQVVLLLKELQRGLVRGRRPAERRRDKSVV
>gi|319761507|ref|YP_004125444.1| general secretory pathway protein e [Alicycliphilus denitrificans BC]
MRHPLPYAFARSSQLLLEDDGQQLVLWHGPQPDACALSEVLRKHAVQQFMPLDAAQLAQRISAAYAQSES
SAATVVSEVEEGADLSRMMQELPAVEDLLESAGDAPIIRMLNALLTQAVRDGASDIHIEPYERHSSVRFR
VDGTLREVVQPNRALHAALISRLKIMADLDISEKRLPQDGRISLRLGTRAIDVRVSTLPNAHGERAVLRL
LDKSESKLSLESVGMQGGVLARFEQLIAQPHGIILVTGPTGSGKTTTLYAALARLDASRSNIMTVEDPIE
YELPGVGQTQVNGKIDLTFAKALRAILRQDPDVIMIGEIRDFETAQIAIQASLTGHLVLATLHTNDAASA
ITRLTDMGVEPFLLSSSLLGVLAQRLVRKYCGHCHGGDHGAGCEHCGHTGYAGRTGVFELLVVDDAIRTQ
IHGQAAEADVRAQALAGGMTLMRDDGERLIAAGITSREEVLRVTRD
>gi|319761508|ref|YP_004125445.1| general secretion pathway protein d [Alicycliphilus denitrificans BC]
MPSFSRRQLRTALHSIAASALLVCATAQIHAQTTNRTHAGSVRPSEPVTLNFANADIEAVARTMATITGR
NVVVDPRVKGQLTLVTENAVTPAAAFQQFLAALRLQGFTVVESGGLYKVVPEADAKLQTGTVSVSQGGAG
GTPAGGQIVTQIFKLNFENANNLVPVLRPLISPNNTINVNPGNNSLVITDYADNLQRLARIVAAMDVANA
TDVEVIPLQHAIASDLAPLVSRLIEGSGGTGTAAAPAAAQGQTDTSFKTTLLPEPRSNALIVRAANPARL
ALVRSLVARLDQPAAPGSSAASGNIHVVYLKNADAVKLAATLRAALQAGNLGAGAGTSANGNSGTGLGSG
LTQTSMAGGTAQSGLGTNTASSSAGGLGAGASTGLNRSGTDNQPSTGGQIQADPTTNSLIISAPEPQYRQ
LRAVIDKLDGKRAQVLIESLIVEVSANKVAEFGIQWQTAFGNYGNGAVGVIGTNSGVAGGNIIDLAVAAA
TGNYASLTSSAIGNGMNVAIAPRINGKYYLGALANFLENTGDANVLSTPNLLTLDNEEAQIIIGNNVPFP
TGSYANTGGNGGAVNPFTTVERKDVGLMLRVRPTINENGTVKLTLYQEVSKVNESTLTNVNGPSTSKRSI
ESTVLVDDGSVIVLGGLLEDSYSLNQDKVPVMGDLPVLGALFRNENRSRKKTNLMVFLRPMVIRDNATSD
ALVMDRYEAIRALQQNTQPAPSTVMRAVSDAPVLPPLQGAAPGAGAQRAPLAPLVPNPPAPARATPAATS
SELYSPQ
>gi|319761509|ref|YP_004125446.1| general secretory pathway n transmembrane protein [Alicycliphilus denitrificans BC]
MSRRPPSRSLTATPRAPWRWAVAGLCLGALPALALWAPARWLAAGVQQASGGQVLLEQARGTVWTGSARL
VLTGGAGSDDRAALPGRLAWRLRPAWGGAQASIMADCCTAEPLALRAALGLGSARVQVADGSSQWPAAVL
GGLGTPWNTVQPQGRLQLSTQGLALQWSDGRMQLQGQAQLDALGMSTRLSTLRPMGSYRLVLQGGRHGEA
PTLQLSTLDGALLLSGSGQWVGQRLRFTGEARAAPEREAALANLLNIIGRRSGARSIITLG
>gi|319761510|ref|YP_004125447.1| general secretion pathway m protein [Alicycliphilus denitrificans BC]
MSTSRPRALAAALRTHWTGLAAREQTLVLVAAAMLGLALLWWLLLAPALAQLRASPARHAALDAELQRMQ
TLQAEALRLRDMPRVQGGEALRALQGALARQLGPAAQMHVAGDRATVTLKGVPPEALAQWLAQVRSTARA
VPVEARLVRSGADAPRWDGTLVLALPSPG
>gi|319761511|ref|YP_004125448.1| general secretion pathway l [Alicycliphilus denitrificans BC]
MSTLVLTLPPGPQAPAAEYSYALTADGHNAIRQACTSAALLPDPGRTGEVVAVVPARALSWQRVTLPQGA
LAQASRLRAILEGLLEEHLLEEPARLHFALQPGAQSGSPVWVAVCDRAWLHEALQALEAAGRPVDRVVPE
FAPGPTASGQQECEVIGAPEDTQIVLTGHGPEQAVAVLPLSAAPALAAMAPAAEDAPPVRAEPAVAALAE
HLLGRPVQIHTASQRALAAARGDWDLAQFDLASSGRTRALRRLGAAANAFARAPQWRAARWGLGLAVAVQ
LIGLNLWAWQDRQALAAKQAGVRGILTQTFPRIQAVVDAPVQMERELALLRQAAGSMAQRDLEPLMAAAG
AALPAARLPGQIEYAGGELLLRGVELPPEELAAANQRLAADGYAARSQDGALLLRPQERP
>gi|319761512|ref|YP_004125449.1| general secretion pathway protein k [Alicycliphilus denitrificans BC]
MRRAARQAGAALLAAMLTVTLVATFAATALWQQWRAIEVESAERARIQSAWILIGALDWSRLILREDSLA
RGGDGTDNLSEPWAVPLEEARLSTFLAASNNVAQVEDASTDTANAFLSGQITDQQGLLNLRNLAGDRQVD
ATALRQFARLFDYLGLPRGQLDLLARQMLRAQVQGGDAGTAPLLPQSVSQLGWWGLPQQSVAALAPYVTL
LPARTTVNLNTASAVVLWASADGLDMADAQRLVQARESRHFRSEADAAKLVGKTGAIGSATHTVSSSYFE
VRGRLRLDSTVVEERSLVFKQRGEARTLWRERGGLASAAAATAGR
>gi|319761513|ref|YP_004125450.1| hypothetical protein Alide_0797 [Alicycliphilus denitrificans BC]
MRHPPKRLRGFTLVELLVAIAVMALLAIVSWRGLDGMVRSQQQTREHADAVLILQTVMDQWGADLDALQA
VEHTEPIAWDGQVLRLTRRGMRQPDEGAVVVAWALRNVDGAAHWLRWQSAPVRTRAEWFDAWDRAARWAR
TPDEAERRQEAVLMPLAGWQLFFYRGGAWANALSTNTAGSLPQSPGGLNSAAASIPEGVRLQLTLPPGGA
LAGVITRDWASPVLGGGKS
>gi|319761514|ref|YP_004125451.1| general secretion pathway protein i [Alicycliphilus denitrificans BC]
MNMRARHAGFTLVEVLVALAIVAIALMAGLQATSALTRNAARQTDVVLAHLCAENELVKVRLSRQMPSIG
NARVACEQARRGYEVAVTVSPTPNPQFRRVDAQVFDAQLPVLRLSTIVGRY
>gi|319761515|ref|YP_004125452.1| general secretion pathway protein h [Alicycliphilus denitrificans BC]
MKLAHPRPADAVDLALPGHGRRPPGRGSRATAQGGFTLLELLVVIAIMALATAGVGLALRDSGATQLQRE
GERLAVLLESARAQSRASGAAVRWRADAQGFHFEGLPAAARLPGHWLDGGTSVRGPGELWLGPEPLIGAQ
QVVIVNQAHPGRAVRVATDGLRPFAAQAL
>gi|319761516|ref|YP_004125453.1| general secretion pathway protein g [Alicycliphilus denitrificans BC]
MAAGFTLIELMVVLVIIGVLAALIVPNVLDRADDARVTAARTDIANLSQALKLYRLDNQRYPTAEQGLQA
LIARPATAPVPNNWRPYLEKLPNDPWGHPYQYLNPGIKGEVDVMSFGADGQSGGEGKNADIGSWQ
>gi|319761517|ref|YP_004125454.1| hypothetical protein Alide_0801 [Alicycliphilus denitrificans BC]
MATPSYHRWAPRLATLALWVLAGASAVYWGLQLSGRVAGPAPAAAAPEPVAADAQALARLLGAQAASAPE
APAAASRFVLLGLLAGTASGDGAALIAVDGKPARPYRVGASVEPGLVLQSLSRREARLGASVEGATTLTL
EMPRPKGE
>gi|319761518|ref|YP_004125455.1| phosphoglycerate mutase [Alicycliphilus denitrificans BC]
MSTLWLVRHARPLAAPGLCYGRLDVPADTQASRAAAQALARALPPKVTAVHHSPLQRCELLALELRALRA
DLASNPDPRILEMDFGGWEGRAWNALPQADIAAWAADLGSHAPGGGEPLAAMLARVAQALRDAAASALPQ
GGDVVWITHAGVARCVQWLQAHGAARAPQSHEWPEAAPGFGSWVQVAL
>gi|319761519|ref|YP_004125456.1| cobalamin-5-phosphate synthase cobs [Alicycliphilus denitrificans BC]
MQALRHYLLAVQFFTRLPVTGRLAAWVGYSPAMLRASSAHFPGVGWLVAAVAIAIYAALWQALGGPQGGS
QGFVPLVAAVGSTIATVLVTGGFHEDGLADVADGLGGAYRRERALEIMKDSRIGAFGAMALVLALAAKLA
LLAHLGSLGLTCVLAALAGGHVLSRLWPLAVVRALPHVGDTATSKSKPLADQITGAALAAAALWCFLPLA
LVWQALGAHVLIAAVLASALGAAWMLWRFARRLQGFTGDCLGATQQVAEIGFYLGAAIALAR
>gi|319761520|ref|YP_004125457.1| threonine dehydratase, biosynthetic [Alicycliphilus denitrificans BC]
MTQPLTPFDYLTRILTARVYDVALESDLQPARALSRRMHNKVLLKREDQQPVFSFKLRGAYNKMAQLSPE
QLARGVICASAGNHAQGVAMSASKLGTRAVIVMPTTTPQVKIDAVKTLGGEVVLSGDSYSDAYEHAVRLQ
QEEGLTFVHPFDDPDVIAGQGTIAMEMLRQLQALGSHRLDAVFVPIGGGGLIAGVANYIKAVSPQTKVIG
VQMNDSDAMARSAREHARVQLPDVGLFADGTAVKLVGEETFRVAHALVDDYVIVDTDAVCAAIKDVFVDT
RSIVEPSGALGVAAIKQYVARHKTKGETYATILSGANMNFDRLRFVAERADVGEEREALFAVTIPEERGS
FKRFCQVVGALPGGPRNVTEFNYRISHETRAHVFVGLSTHGRGESEKIAKNFLKHGFESLDLTHDELAKE
HLRHLVGGRSALARDERLMRFTFPERPGALFKFLSLMQPTWNISLFHYRNQGADYGRILVGMQVPAEDAA
AFDAFLQQLDYPYVEETQNPAYRLFLQANGS
>gi|319761521|ref|YP_004125458.1| osmc family protein [Alicycliphilus denitrificans BC]
MECTVSWTGNAGTRSGMGFIAETGSGHVLAMDGAPDASRPENGGQNLAPRPMETVLAGTGGCTAYDVVLI
LKRGRHDVRGCSVRLTSERADTDPKVFTRIHMQFTVTGCGIPAAAVERAIAMSHEKYCSASIMLGKTAQI
TTGFEIVEA
>gi|319761522|ref|YP_004125459.1| ubiquinone biosynthesis protein [Alicycliphilus denitrificans BC]
MDRFLIAADSALRTLRATPPAGAASPAAAVPAAELSAPQKRLSGALMRVNHVGEVCAQALYMAQSCVTDD
AALRSELLAAAREEADHLAWTRERLDQLGSRPSLLNPLWFAGAFAIGLAAARIGDRVSLGFVVETERQVS
EHLQGHLGRLPDEDLPSRAIVARMQQDEERHAAQAQAAGAAPLPPPARWLMRAAAKVMTATAHYI
>gi|319761523|ref|YP_004125460.1| porin gram-negative type [Alicycliphilus denitrificans BC]
MKKSLIALAVLAASGAAMAQSSVTLFGIIDTNFGYVDNTNAAGDSKYGIGTSGNATSRLGFRGVEDLGGG
LKAGFWLEGEIFGDNGNASGFNFQRESTVRLSGNFGEVRLGRELVPTYRKVSSYDVFGQVGIGMFQGWSN
WAGVGTADANGYRQSNIVSYYTPNFSGFTAGAGYGFDEQATGKEGRYAGAFGAYDNGPLSVALSFDRRNV
GALGAGTKDNLTVGGSYDLSVVKINALLQQAKYKDVGAASGKYNSYGLGLTAPVGAGEIKAQYVMYDQKA
IDSKAHQFALGYVHNLSKRTALYGTVAYLKNKDASNMALQAKQVSTTGPGAGENQTGVQLGIRHSF
>gi|319761524|ref|YP_004125461.1| porin gram-negative type [Alicycliphilus denitrificans BC]
MRLFTKKSIAFAALALCGSGASLAQSAGTSKVELWGIVDVAVRHTNKEGPTQAGLTKMIGGGMSQSRWGI
NVEEDLGGGSKALVVLENRFDADSGTPAVNAPYFQLAHVGLQGPYGRLTAGRQWNVLFDVVTSTYASFPY
SPYMEAYKPELGMAMGARTSNMLKYMFATPDRRWVGALQYSFDENNTATGNPGFPGSAAQIPAYVAGTLN
GGAWKTAGGYLRFSAAGAALGGGYLRTTLPGGTDVDAWTLGGSYRTGPWYLTAGYGLNKAKFAAVTSPLV
ALRNGVDGAILGQFWSGQTNGGFQPGDANKRQLFKVGVGYQMTTQLNLGAHYFRGKQSGSTTGLSNGNAD
FLVAVADYAFSKRTDAYFGVDHTRISGGNAIVLDSASNARNRTGFTVGLRHRF
>gi|319761525|ref|YP_004125462.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MLAFILRRLVQALIVMITVAFIAFMLFQFVGDPVAILLGQDATPQQVAEMRAALGLDKPFVVQFWHFLVN
AAQGEFGISLRQGAKVSRLIAERFPATLELSLVAAFIALVVGVPMGVYAALRRGTFMSQLFMTLSLLGVS
LPTFLIGILLILVFSVTLGWFPSFGRGEVVQLGWWSTGLLTAKGWHHITLPAITLAIFQLTLIMRLVRAE
MLEVLRTDYIKFARARGLTDRAIHFGHALKNTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLLFIQA
VTFADIPVMAAYLCLIALIFVVINLVVDLLYFAVDPRLRVGGKAGGH
>gi|319761526|ref|YP_004125463.1| amidohydrolase [Alicycliphilus denitrificans BC]
MQPMKFKVGGRAFAQIAEFHPELTAFRRDLHAHPELGFEEVYTSARVREALRAAGVDEVHEGIGRTGVVG
VIRGQGRGSGSMIGLRADMDALPMTEHNDFAWKSCKSGLMHGCGHDGHTAMLVGAARYLAGTRRFDGTAV
LIFQPGEEGLGGARVMIEDGLFERFPVQAVYAMHNWPAMKPGTVGINDGAMMAAADRITIEITGRGGHGA
HPYQTVDVVLVAGHIITAVQGIVSRNVRALDSAVISLCAVQAGDLGAFSVLPGQATLVGTVRAFDPAVQD
MVAQRIKDLCNAIALGFGATVTVRYERIYPATINTAGEARFAGDVAAALVGEDNVDRDLEPSMGAEDFSF
MLQARPGAYLRLGQGMGAGNSTLHNSRYDFNDDVLPLGAALHAGLVEQAMPLADGQ
>gi|319761527|ref|YP_004125464.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MQKTLLRWYDSDVAHSFRSSPVAILAALIALVCTFCALFAGWVAPHNPFDLSTLVLSDSRLPPVWMAEGS
WKYVLGTDDQGRDILSALIYGARISLVVGLASVLLSVVLGVALGLVAGFRGGWVDGVLMRLCDVMLSFPA
ILIALLIAGVARAVFPDAPESLAFGVLILAISLTGWVQYARTVRGSTLVERNKEYVQAARVTGVAPMRIM
RKHVLPNVLGPVMVLATIQVATAIITEATLSFLGVGAPPTSPSLGTLIRIGNDYLFSGEWWITIFPGVML
VLIALSVNLLGDWLRDALNPRLR
>gi|319761528|ref|YP_004125465.1| oligopeptide/dipeptide abc transporter, atpase subunit [Alicycliphilus denitrificans BC]
MSLLEVQNLVVEFPTRRGTLRALDDVSFSIAPGEILGVVGESGAGKSLTGASIIGLLEPPGRVASGQIRL
EGQRIDNLPHAQMRHIRGRKIGAIFQDPLTSLNPLYTVGQQLVETILTHLPMSAAQARQRAVDLLKDTGI
PAAEQRIDHYPHQFSGGMRQRVVIALALAAEPQLIVADEPTTALDVSIQAQIIQLLKSICKTRGAAVMLI
THDMGVIAETCDRVAVMYAGRVAEIGPVHEVINRPAHPYTAGLMASIPDMEQDRERLNQIDGAMPRLNAI
PNGCAFNPRCPQVFDRCRAERPDLMPAGATQAACWLHAVEKEVA
>gi|319761529|ref|YP_004125466.1| oligopeptide/dipeptide abc transporter, atpase subunit [Alicycliphilus denitrificans BC]
MNPAPNPLVRAHDLARTFDVSAPWLNRVIERKPRQLLHAVDGVSFEIEKGKTLALVGESGCGKSTVARLL
VGLYEPTRGGFSFDGQDAHAAFKGKGARAMRRRIQMIFQDPYASLNPRWLVQDIIGEPLREHGLVTQAAA
LKTRVGELLTSVGLAPQDMAKYPHQFSGGQRQRISIARALATEPEFLVCDEPTSALDVSVQAQVLNIMKD
LQQKQGLTYLFISHNLAVVRHVSDQVGVMYLGRLVELADKQQLFSQPRHPYTRMLLDAIPKMHDTGRART
PVQGEVPNPLDPPPGCAFNPRCPFANARCRSERPQLLQGEGGARVACHAVEEGRIGRA
>gi|319761530|ref|YP_004125467.1| pebp family protein [Alicycliphilus denitrificans BC]
MTAFTLTSPDIAAGSTIAQVFEFDGFGCSGKNQSPVLRWSGAPEGTKSFAVNVYDPDAPTGSGFWHWYVI
DIPADVTELPADAGAKGGANLPKGARQIRNDYGIYAWGGVCPPPGDKPHRYIFTVHALSVERIEVPDDAP
AALTGFMVNANTIAKASFTATYGR
>gi|319761531|ref|YP_004125468.1| helix-turn-helix protein rpir [Alicycliphilus denitrificans BC]
MLDRITASLPSLAPAEQRVARLVLKDPRAFAHLPVRELAERAHVSKPTVVRFCRSMGYDGLADFKLKLAG
SVSEGVPFIHRSVDADDKTGDVLVKVVDNAMAAFLQYRNAASTQLLERAAEAIAGTWQTGRRIEFYGAGN
SGIVAQDAQHKFFRLGITSLATSDGHMQVMSATLLGPGDCAVIISNSGRTRDLMDAADIARKNGATTIAI
TASGSPLAHSCRIHLAADHPEGYDRYSPMVSRLLHLLIIDVLATCVALRIGEPLQPVLQQMKNNLRAKRY
T
>gi|319761532|ref|YP_004125469.1| transaldolase [Alicycliphilus denitrificans BC]
MNQLDALKQFTTVVADTGDFKQLAQFQPRDATTNPSLILKAVQKSEYAPLLKDCVTRWHGRGIDELMDRL
IVRFGCEILSLIPGRVSTEVDARLSFDTAATVARAERIVELYQAEGVHIDRVLIKIAATWEGIQAARRLE
ERGIHTNLTLLFSFAQAVACGQAKVQLISPFVGRIYDWYKKQAGSNWDEAAMAGANDPGVQSVRAIYNHY
KHFGIATEVMGASFRNTGQIVALAGCDLLTIAPELLAQLAASDAPLARVLDPEAARHVQMAPVQYDEPGF
RYALNADAMATEKLAEGIRAFAADAARLEQLMQAAA
>gi|319761533|ref|YP_004125470.1| glucose-6-phosphate isomerase [Alicycliphilus denitrificans BC]
MSFADPHTRCDRTPAWQRLHAHYDAAGRGFDLRAAFERDARRFTRFSQQAPYVFADLSKNLIDAQTEALL
LQLARECGLEAYRDAMFAGAPINGTEQRAVMHWLLREPSPAQSGQALEATDTVANGLREVHATLDAMLRL
AERVRADEAITDIVNIGIGGSDLGPAMVVKALDDLRHPGKRLHFVSNVDGMELGSLLRQLRPANTLFLIA
SKTFTTLETMTNAHAAREWFLAQGGSQDGLVRHFYALTTNLEAAAQFGIETTLGFWDWVGGRYSLWSAIG
LPIAIAIGAQGFRDLLAGAHAMDEHFRTTPLEANLPVRLALLDLWYRNFHGFASRSMAPYSHGLRRLPAY
LQQLEMESNGKGVDAQGDPLPYATAPVVWGEPGTNGQHAFFQMIHQGPDTVPVEFIALREPGRDLKGQHP
RLVANALAQARALMMGRPHEQDGHRRFAGNRPSTFLLLECLDPASLGALIALYEHRVFASGALWGINSFD
QWGVELGKTIARDLEPRLATGDVQGLDASTAGLLRRLAPMA
>gi|319761534|ref|YP_004125471.1| chaperonin groel [Alicycliphilus denitrificans BC]
MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKIQNMG
AQLVKEVASKTSDNAGDGTTTATVLAQAIVREGSKYVAAGLNPMDLKRGIDKAVTALVEELKKASKATTT
SKEIAQVGSISANSDSSIGEIIANAMDKVGKEGVITVEDGKSLNNELDVVEGMQFDRGYLSPYFINNPEK
QVALLDNPFVLLFDKKISNIRDLLPTLEAVAKAGRPLLIIAEDVEGEALATLVVNTIRGILKVVAVKAPG
FGDRRKAMLEDIAILTGGKVIAEEVGLSLEKVTLADLGQAKTIEVGKENTTIIDGAGNADDIQARVKQIR
IQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RARQAVGQLKGDNPDQDAGIKLILKAIEAPLREIVANAGGEPSVVVNEVLNGKGNYGFNAANDTYGDMLE
MGILDPTKVTRTALQNAASVASLLLTTEAMVAEAPKDDAPAGGMPDMGGMGGMGGMGM
>gi|319761535|ref|YP_004125472.1| chaperonin cpn10 [Alicycliphilus denitrificans BC]
MNLRPLADRVIVKRLENETKTASGIVIPDNAAEKPDQGEVVAVGPGRLDEDGDRIAMSVKVGDRVLFGKY
SGQTVKVHGDELLVMKEDDLFAVVEK
>gi|319761536|ref|YP_004125473.1| cytidyltransferase-related domain protein [Alicycliphilus denitrificans BC]
MYDAAVLIGRFQPVHNGHLALLREALARARQAVVVVGSAFQARTPKNPFTWQERAQMLRAALPEPERARL
TMLPMRDYYDEPRWADAVRQTVAQATPARARLALVGHFKDSSSGYLRAFPGWDLIRMERQGTIDATAIRD
AYLGASASTPEAALAPWAPHIPAATRAWLEQFAHTAHYPALQEEWRMLRAYRNSWACAPYPPVFVTVDAL
LRCQGRVLLIRRAHAPGKGLWALPGGFVEPHDTLWQSCLRELAEETHCPLPEERLRQALRAVRVFDHPER
SQRGRVITHAYFFDLDDDALPEVRGGDDAAHAQWVAQEQLAGMEDQFHDDHWHIIGQLLAPG
>gi|319761537|ref|YP_004125474.1| s-adenosylmethionine synthetase [Alicycliphilus denitrificans BC]
MANDFLFTSESVSEGHPDKVADQISDAILDAIFEQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVA
RDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNTGAGDQGLMFGYACDETPELMPA
PIYYAHRLVERQAQLRKDGRLPFLRPDAKSQVTMRYLDGKPHSIDTVVLSTQHSPDQSETATKMKASFTE
AIIEEIIKPVLPKEWLKDTKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVD
RSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVISDERIAQLVHEYFDLRPKGII
QMLDLLRPIYAKTAAYGHFGREEPEFTWERTDKAQALRAAAGL
>gi|319761538|ref|YP_004125475.1| lipid a biosynthesis acyltransferase [Alicycliphilus denitrificans BC]
MPSIFRLLSALPLWLLHAIGALLGWVAFCASPTYRRRFLANAARAGYRLRDVRAAVAHAGRMVAEAPRLW
LAPEPPPCEVRNAECVQRAWEQGRGIVFLTPHIGCFEMSVQEGARRWSPQHGSFTILYRPARQPWLARVM
QTARNRPGIAAVPTSLQGVRQMLKALRAGRAVGLLPDQVPPQGQGLWSPFFGQSAYTMTLAARLVQQTGA
AVILARCERLPRGRGYVLHLQALEQPLAPTLDAAVLQINQAMERLIRQSPDQYLWGYARYKQPRAEAQQP
ESIA
>gi|319761539|ref|YP_004125476.1| lipid a biosynthesis acyltransferase [Alicycliphilus denitrificans BC]
MTARLASRAGIALLNLLGRLPLPALRALGAWIGRLLFVLAAPRRKVALRNLELCFPDVPEQQRRAWARES
FESFCQTFLDRGWLWSGSEALVRSRVKLVGAVQELEGDTPTIVFAPHFYSMDAGGLALPLNTGREFTSIF
ATNPDPALDAWFMGGRQRFGNVRMLNRADGVKPIIACLRKGGLLYLLPDMDYGRNDSVFVPFFAMPDAAT
IPSLSRFARLGRAKVVALYSRMTPEGYVAELTPAWENFPTDDHVADTARMNRELEAAIRTMPAQYYWVHK
RFKTRPEGQPSLY
>gi|319761540|ref|YP_004125477.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MNFDLSDLRAFVAVADLASFRAAAEALHLSQPALSRRVDKLEQALGFRLLERSTRKVELNAMGRAFLPRA
RHVLAELEGALLGMADLAERIHGLVTVACIPSAVDNFVAQAARGFQQRFPRIRLRVLDQPAPEILMSVAR
AEADFGISYLGTQEPDLDFDPLVDEPFVLACRSDHPLAQRPAIEWAELAGHDCIALAPGSGNRLLIEQGL
AGNGARPRWSCEAQHVPAVLSLIEAGVGVGAVPQLALAGATSAALVSIPLVAPRIARSVGIVRRRGRPLS
PAAQAFHDAVAGAAQRLRFQ
>gi|319761541|ref|YP_004125478.1| fis family transcriptional regulator [Alicycliphilus denitrificans BC]
MFPIRWKAALGCLALISLAVVTQAQAQAPWPARAITLIVPFAAGGGTDSIARDIAKNMAERLGQPVVVDN
RGGAGGAIGAQAVAKAAPDGYTLLFATSTFATNAAVEPRLPYDPVKDFAPVAMIGRGPLLVVTSKQLGVG
SVAQLVAAAKARPEGLNFCSAGNGSINHLAGEMFRQKTGLSMTHVPFKGSAPATVELLAGRVDLFFATVP
TIQSHLKENQLGLLAVTSAKRSRLFPNLPTLAEAGVPGYDVTTWWGVLAPAKTPASIVEALNRAVNESAA
AEPVKGRLQHEGADPVRLAPAAFGEELRKELALWRNVAAAPGMQLR
>gi|319761542|ref|YP_004125479.1| hypothetical protein Alide_0826 [Alicycliphilus denitrificans BC]
MQHTLSRRTFVGASAALALTGWARAQGGYPNKPITVIVPYAPGGQGDVFARLVGEPLARALGQPVVVDNR
PGASGALGTRLAARAPADGYTLLMGQTGEIAINGAAMKNPGYDALKDLRAVALVGDAPLVLAVPAASPFK
SLADLVQAARERPGSVAYASSGTATPGHLAAAELAARTGTQMTHIPYKGAGQAIADLIGAQVQFFFASAS
SIVGYVKGGKVRALAVSKPARIAALPGVPAVSDTLPDFAFSLWGGYFAPRGTPDAMVQRLAGEIGRIIAQ
GPLRERLEAEGSAVEAGTPKSFDAFVRAEADKYARLVKAAGATLEG
>gi|319761543|ref|YP_004125480.1| 3-isopropylmalate dehydrogenase [Alicycliphilus denitrificans BC]
MKIVVLPGDGIGPETMAATIEVLQAASQRFGLNLQLDHDVAGHESLRRHGATVTPALLAKVKAADGLMLG
PMSTYDFKDESKGEINPSKFFRKELDLYANIRPARTWLGVPHKVDAFDLVVVRENTEGFYADRNIASGGS
EMLITPDVAVSLRRITRSCCERIARAAFELAMTRRRHVSIVHKANVLRIGDGMFIEECQRVARDFPEVQV
DEFIVDAMMAHVVRAPQRFDVIVTTNMFGDILSDLTAELSGSLGLGGSVNAGRDHAMGQAAHGSAPDIAG
QDIANPFSLILSAGQLLGWHGQRHGLPAFLAAAEAIEHTAAAAVEAGEVTPDAGGRLGTAATGRAFAQRL
QGA
>gi|319761544|ref|YP_004125481.1| amidohydrolase 2 [Alicycliphilus denitrificans BC]
MVAGACDCHTHVFGPRADYPMVDARHYTPGPAPLAALRAHLAGLGLERVVLVQPSVYGTDNRCMLDALAR
LDGAGRGIVVLEDGVDAAALRELHARGVRINLESAGLRDIAGARALLQAWSARVADLGWHVQLYAAQPVV
QALADDLARLPSSVVLDHFALADVMPGGDALTDLLRTGCVHVKLSAPYRLASPALGGAWARHWVDAVPGA
LLWASDWPHTARGPGRAAHEVSAYRAIPANGLRQEIARWLPSAELRRRVLVDNPARLYGF
>gi|319761545|ref|YP_004125482.1| ribosome biogenesis gtp-binding protein ysxc [Alicycliphilus denitrificans BC]
MSTTPHVPGPGLPDAKAALGWMHTARFLTTAAQLSQLPAITVPEIAFVGRSNAGKSTCINTLTQQRQLAF
ASKKPGRTQHINLFALGKQGATDAVLADLPGYGYAAVSRSDKQRWQQVMANYLVSRQGLTGIVLLCDPRL
GLTELDEALLEVVRPRVEQGLKFLVLLTKADKLTRAEQAKALSIARLQAGGGEVRMFSALKRQGVDEVAQ
LLWQWAHPTEEPAAEPDQNP
>gi|319761546|ref|YP_004125483.1| cytochrome c class i [Alicycliphilus denitrificans BC]
MKLLASLLMAAALAAPAFPTLAAGETPAQQKAAKPDLTKGAASYGAVCAACHAADGNSTIAVNPSLAQQH
PEYLVKQLQDFKSGKRADPVMQGMAAMLSDDDMRNVAGWLASQKAKEGFAKDKDLVALGERIYRGGIQDR
SIAACAGCHSPNGAGIPAQYPRLSGQHSDYTVKQLVDFRDGKRGNNAQMRDVAAKLNDREIKAVADYIAG
LR
>gi|319761547|ref|YP_004125484.1| resb family protein [Alicycliphilus denitrificans BC]
MSDTSLGHGHAWRPHATRSMTELLASMRFAIALLTVICIASVIGTVLKQHEPVTNYVNQFGPFWADLFLA
LKLNAVYSAWWFLLILAFLVVSTSLCIARHAPKYIADLRNYKENIREKSLQAFHHKATVPLAGEAPQAAA
QRIGQLLVSGGWKVRLQQRPTPAGDGWMVAAKAGAANKLGYIAAHSAIVLVCLGGLLDGDLIVRAQMWFG
GKTPYAGGGLIAEVKPEHRLSERNPTFRGNLVVAEGTQSATAILTQSDGVLLQELPFSVELKKFVVEHYS
TGMPKLFASDIVIHDRATGKATPARVEVNHPVSYQGVEIYQSSFDDGGSEVKLHARPMVPGAQPFDVEGV
IGGSTRLTHTGLGEAMTLEFTGLRVLNVENFGDAGAAGSGADVRKVDLRESIESRLGAGNKTVGKRELRN
VGPSISYKLRDAAGQAREFHNFMLPVDTGDGQPVFLLGVRETPSEPLRYLRVPVDAEGGMDGFLRMRLAL
ADPQQREQAVRRYAAVAVDGSRPELAAQLALSAGRALALFAGDVAATGAAADDGAGSGGRPRGGLQAISD
FMEANVPEAERSRASEVLVRILNGALFELAQMTRERAGLAPLPQDESTRAFMTQAVLSLSDAQAYPAPLV
FELRDFRQVQASVFQVARAPGKNVVYLGCALLILGVFAMLYVRDRRLWVWLAPEGGGARATMALSANRRT
LDTDREFAQLRTQLLEAETETETAQPPHGGTP
>gi|319761548|ref|YP_004125485.1| cytochrome c-type biogenesis protein ccsb [Alicycliphilus denitrificans BC]
MNTATTTLTLNEGYFARRNWLDWLFALAVLAGGLFALQRYAAYMDVYEKGILLATMPGAIWLGWFWRPLR
ALMLAVAACALLAIGLYQNGGAGDLARADTVFGLKYFLSSQSAILWMSMLFFMSTAFYWVGMFTRGQGQA
MMRIGSRIAWVAVALALIGTMVRWYESYQIGPDIGHIPVSNLYEVFVMFCWMTALFYLYYEEQYQTRALG
GFVMLVVSAAVGFLLWYTVVREAHEIQPLVPALKSWWMKLHVPANFIGYGTFALSAMVAFAYLVKQQAAE
TRWYKLAPLWLLGVVLCFEPIVFRQGATEGGGAYWMVYFGISALIVAGILFARRRIAEQLPALQVLDDVM
YKSIAVGFAFFTIATVLGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGTMSAWWALVG
LVVTTFAFLGVNMFLSGLHSYGTL
>gi|319761549|ref|YP_004125486.1| oxidoreductase molybdopterin binding protein [Alicycliphilus denitrificans BC]
MLIHTHDNGFDHHSASEITPRAVYEQRRALLRLMAGGAAGALLASWAGRQALAQQVQPPGRLAALPGVRS
AVVGAVTMEKPTDYKDATGYNNFYEFGTDKTDPARNAHTLKTRPWTVEVEGLVNKPRRFDIDELLRLSPM
EERIYRLRCVEGWSMVIPWVGYSLAELIRRVEPQGSAKYVEFVTLADKATMPYVGSRILDWPYTEGLRVD
EAMHPLTLLAFGMYGEVLPNQNGAPVRIVVPWKYGFKSAKSIVKIRFTEKEPATAWNKAARNEYGFYSNV
NPGVDHPRWSQATERRIGEDGLFAKKRKTLLFNGYEAQVGQLYAGMDLKKFY
>gi|319761550|ref|YP_004125487.1| ferric reductase domain protein transmembrane component domain protein [Alicycliphilus denitrificans BC]
MRQARPGGQAAADRALRHPAAKPLLFVLCLLPLAWLVYAAAFDRLGANPAEALIRSMGDWTLRLLCLTLA
VTPLRLAARLPALARFRRMLGVYTFFYAALHLLCYAWFDMGLDGGEIARDVAKRPFILVGMCGFVLLLVL
AATSFNRAVRWLGGRRWQRLHRSVYLVAGLALLHFFWMRAGKNDFAEVAVYAAILAALLLARPWLRRGRS
PGP
>gi|319761551|ref|YP_004125488.1| beta-lactamase domain protein [Alicycliphilus denitrificans BC]
MPLEPLELYRDQHHACLMFSDLIEEDGQAVQANQFLIVDGDTGAIIDPGGNLAFNELFMGMSRYFPPHRL
SYLLASHADPDIIASLDRWLSSTRALLVISRVWERFAPHFAKLGKTENRIIGVPDGGGLLPLGRHELLLL
PAHFMHSEGNFHFYDPVSRILFTGDLGVSMTSGAEARVPVTALAPHVARMEAFHRRYMVSNKVLRLWTRM
ARQLDIAMLAPQHGAPIMGQQAITDFFDWLDGLECGTDLFDERSYQIPTARIDPVAH
>gi|319761552|ref|YP_004125489.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans BC]
MIPSVLPGQPQLHYRDQALYLEDRRLSDLAREHGTPLYVYSQASMLQALAAYQRGFAGRRVQICYAMKAN
SSLAVLQLFAQHGCGFDIVSGGELERVMAAGGDPAKVIFSGVGKTRAEMRQALEAGIGCFNVESEAELEV
LSEVAQSMGLRAPISIRVNPNVDAKTHPYISTGLKGNKFGIAHERTLDTYRRAAQLPGLRVVGIDCHIGS
QITEETPYLDAMDRLLDLVQAIEAAGIAIHHIDFGGGLGIDYNGDTPPAADALWSSLLAKLDARGYGDRL
LMIEPGRSLVGNAGVCLTQVLYLKPGEQKNFCVVDAAMNDLPRPAMYQAYHAIVPLDAAAKAPEQVYDVV
GPICESGDWLGKDRSLAVAAGDMLAVLSTGAYCSSMGSTYNTRARPAEVLVDGAQAHLIRAREGISDIFR
CERLIPPKS
>gi|319761553|ref|YP_004125490.1| hypothetical protein Alide_0837 [Alicycliphilus denitrificans BC]
MLRARQILVRTIALALSAAALGCGQRGPLYLPTEPAAAQRATLPETLNPAASRATAPAAPSSVPASSSLP
>gi|319761554|ref|YP_004125491.1| iron donor protein cyay [Alicycliphilus denitrificans BC]
MTDLEFMDRAEQLLLAVEQGCDRINEETDADLDSQRTGGMVTISFRNRSQIVINLQKPLHEVWMAAQSGG
YHYRFDGARWMDTKGDGEFFAALSRDASRQAGQELRFTA
>gi|319761555|ref|YP_004125492.1| penicillin-binding protein, 1a family [Alicycliphilus denitrificans BC]
MRWLLRGLAWLVGLGVAGALAGVLVVGVGLAMAYPNLPDVSDLADYRPKLPLRVYSSEGALLGEFGEERR
NLTPIEDIPAVMTNAVLAIEDARFFQHGGVDYKGVLRAALANLGRVKSQGASTITMQVARNVYLSSEKTL
TRKIYEILLTFKLEHLLSKNQILEIYMNQIYLGNRAYGFAAASEAYFGKPLKSISIAEAAMLAGLPKAPS
AYNPISNPKRARIRQLYIIDRMLENGFITAEQAAAAKQEDLKLRSSTNSTRVHAEYVAEMARQLVFSQYG
AEAYTRGLNVYTTLNAGEQEAAYAALRKGIMDYERRQHYRGPERFVNLPASPAEAEDAIDDVLASHPDNG
DVLAAVVLEASSKKIVAARADGEQIEITGEGLKPAQSGLSDKAPPNIKLRRGAVIRVVQTPKKTWEITQL
PEVEGAFVAMDPRTGAIHALVGGFDFDKNKFNHATQAWRQPGSAFKPFIYSAALEKGFTPATVVNDAPLF
FSAGATGAQPWEPKNYDGKYDGPMTLRTGLARSKNVVSIRVLQAVGPKTAQDWVTRFGFDADKHPAYLTM
ALGAGSVTPMQMATAYSVFANGGYRVNPYLVTRVTDHKGRVLSNVQPPATTDNPRAIDARNAFVMDSLLQ
EVTRSGTAARAQATLKRPDLYGKTGTTNDAVDAWFAGFQPSLVAVTWVGYDTPRNLGSRETGGGLALPIW
ISFMDKALKGVPVAEPTVPPGVVNVSGEWFYEEYARNAGVASVGMDAPAPAAPAVAPAPEERSRILDLFR
N
>gi|319761556|ref|YP_004125493.1| type iv pilus assembly protein pilm [Alicycliphilus denitrificans BC]
MGSLFSRQSAPLLGVDISSSSVKLVELGRDKGGTLVLECCAIEPLERGWITDGNIEKFDEVAEALRRLVR
KSGTRTKNVALALPPSAVITKRISLPGGMTEQELEVQVESEANQYIPFSLDEVSLDFCVVGPSKNAPGDV
DVLIAASRKEKVQDRQGLAEAAGLKPVIVDIESHAARLAAGRLIEALPNRGVDSVVALFEVGALTTSMQV
IRNDDVLYERDQAFGGAQLTQLIVRQYGFSQEEAEGKKRNGDLPEDYQSAVLQPFVDSLAQEIGRALQFF
FTSTPYNRVDHIMLAGGSAPLFGLTQTVTQNTGFACSVINPFEGMEVGSAVRLKRMAREAPSYLTSCGLA
MRRFLQ
>gi|319761557|ref|YP_004125494.1| fimbrial assembly family protein [Alicycliphilus denitrificans BC]
MILINLLPHREAARKRRRETFQAIMLASALAGLAIAAAIYWWFQVMITDQQDKNNFLRGEIQVLEQQIKE
IATIEEEITALQARQKAVEDLQSDRNLPVHLLSELVQQLPDGVYVTSLKQVDQVVTMQGMAQSNERVSEM
LRNLTNNTPWFSKPELVEIVAANVALTPKDQRRIASFNLRFRLMRSSEAQKAMDAASDAAAGK
>gi|319761558|ref|YP_004125495.1| pilus assembly protein, pilo [Alicycliphilus denitrificans BC]
MSMAKKKAPKFDFAKLQGDLQRQFQNLDPKDPSLWPVLPRTLLCLLIAAGMATFLWFFKLSEFQDELTAE
RSTEQTLRDDYQKKLVKAVSLDALKKQREQIQQYVIQLEKQLPSKAEMSALLSDINQAGLGRSLQFELFR
PGQVVVRDYYAELPISIRVVGKYHDVGAFASDVANLSRIVTLNNLSIAPATKDAGSNLTMEATARTFRYL
DAEEIQAQKAAAKGAKK
>gi|319761559|ref|YP_004125496.1| pilus assembly protein pilp [Alicycliphilus denitrificans BC]
MMRFRCRQLIVLAGVLILSGCGGSDEDELRQWMAELRATTKPRVTPLKEPKQFLPQDYFGDKGMDPFSPM
KLTQALRRESSETVANASLIAPEMARRKEPLEAYPLDTVKMVGSLNKTGVPTALVSVDKLLYQVRTGNYL
GQNYGKIVSISETNMRLREIVQDSTGDWVERMTTLDLQEGNEVRK
>gi|319761560|ref|YP_004125497.1| type iv pilus secretin pilq [Alicycliphilus denitrificans BC]
MMRQKTRLRRHLWAVGVAILTALGGTAAHAGGTIESVTGFLQGGAEVLRIEFSEPQTDLPTGFSIQSPAR
IALDFPGVGNTSGRSLVEINQGNVRSANIVQAGERSRVVLNLKQPTSYRAELHGKTVMVLLDPVTGGARV
PSASPTAFAESQNTDVLALKDLDFRRGTDGAGRIVVGLPSSQVGVDLQLQGKGLVVDFLRSSLPEGLRRR
LDVSDFGTPVQTITATQQGERVRLAIESVGEWEHSAYQSDNQFVVEIRPKKVDLSKLTQGPNYTGEKLSL
NFQNIEVRSLLQVIADFTNFNIVTSDTVTGALTLRLKDVPWDQALQIIMDAKGLGMRKSGTVLWIAPKDE
IDERTKKDYEAALAIQKLEPLRTQAYQLNYAKAADMVIQLTTSASSGGGSGSATRFLSERGSAIAEPRTN
QLFVTDTPAKLEEVRKLLLTLDVPVRQVMIEARIVEARDTFGRSLGVRLGGGDLRANRGGDGGYSIGGGN
RAAWGTNYSNATNSAGFGDAVNVGGNFVNLPASLSNVTGVGSFALSIFNSAANRFLTLELSAMEADGQGK
VVSSPRLITADQTKALIEQGTEYPYSVTAPNGATTIAFKKAVLKLEVVPQITPEGNIILDLDVNKDSRGE
STTQGVAIDTKHIKTQVLVENGGTVVIGGIFELEETNQENKIPLLGDVPVMGNLFKSRTKESSKREMLVF
ITPKVITDRGPVR
>gi|319761561|ref|YP_004125498.1| ig family protein [Alicycliphilus denitrificans BC]
MRISKTIITSAVFAAVLSACGGGGGSGGESHSTYSITLRADKTQLPLNVSSYPVGQGVYAPFSSTLYVEA
QEGGRPIPGGEKIFGCNMAGGLDSGSLYYLDGDPEHEEEVDDGNGGKIKVPKAYRSITLSSNSGGNSFHF
HAKNQAGTARIVCTVTDPRDKKEHSASVDITVGGTTGKPASVKMLVPSQQSYMGTQGNATRIPSTVVMQA
FVQDDAIQPVSSSSGANVQVRILPGTDAAVGARLVAGVLSGGVLQLPSIGGVAQFSLVSGAETGPIFLEF
TADRYDNNVGNGIQDPITIIDQISVIEAQTDALAVSDEDLGQVTNTISYTHLLTAQGGLPPYTWSATGLP
KGLSVDSGTGVLSGTPDDVERVYQATVTVRDKNKLADSGAIKLTLIGAVTPEDFAIGNCNLNQVCPLGNV
PGGQNFAYAFTASVPGVTWSFAGLPSWLTSGTTGVTGFISGTPKACTNSVPAVPPAPATPADPGDTGTYT
FFVTATKGVTNVTRQVSLTVTGSCS
>gi|319761562|ref|YP_004125499.1| 3-dehydroquinate synthase [Alicycliphilus denitrificans BC]
MKQSTPPIEGVRIVLGDRSYDIDIGSALLAGLAAHKALPSGTAALIVTNDTVQPLYEKALVEALAGRYPV
VHTVALPDGEEHKNWQTLNLIFDALLTHGCDRKVVLYALGGGVIGDMTGFAAACYMRGVPFVQVPTTLLA
QVDSSVGGKTAINHPLGKNMIGAFYQPRLVVCDLATLDTLPARELAAGLAEVIKYGPIADMELFGWLEEH
MDALLARERQALAHAVRRSCEIKAAVVGADEREAGLRAILNFGHTFGHAIEAGMGYGVWLHGEGVAAGMV
MAAELSRRLGLVDEAFTQRLTRLIARAGLPTRGPVLDAQDNAGRYLELMRVDKKAEGGEIRFVLIDGPGK
AIMRAAPDALVREVIAQCCAAA
>gi|319761563|ref|YP_004125500.1| deoxyguanosinetriphosphate triphosphohydrolase [Alicycliphilus denitrificans BC]
MLDSALAPHACHPGRSRGRRHPEPPAPTRTEYQRDRDRIVHSTAFRRLVYKTQVFLNHEGDLFRTRLTHS
LEVAQLGRSIARSLRLNEDLVEAVCLAHDLGHTPFGHAGQDVLNECMQDFGGFEHNLQSLRVVDRLEERY
PQYDGINLTFETREGILKHCSRRNAELLEAREPGGVGRRFLLGRQPSLEAQLCNLADEIAYNAHDIDDGV
RSGLITLAQLRDVPLFDRYRARAEAEYPHLAAPAGQRRLLAEAIRRMLSDQVYDVIDATRAALAAHAPAD
VDAVRGLPALVGFSPDMRAQSQVLKRFLFRELYRHPQVVQTTDRARQVVRELFSIYQAGPREMPTAQAAS
ALEGDAQQRARTVADFIAGMTDRFAAREHERLTGRRLLGR
>gi|319761564|ref|YP_004125501.1| hypothetical protein Alide_0848 [Alicycliphilus denitrificans BC]
MTTAPTPDQPSPSACDDTVVVQDTVRWLERAVIGLNLCPFAKSVHTKGQIHYVVSHATDARALLEDLQRE
LEALAEAPPDKRDTTLLMAPLAMPDFLDFNDFLELADELVEAMDLAGILQVASFHPRFQFEGTLADDVSN
CTNRAPYPTLHLLREESIDRAVEAFPEAEEIFERNIEVLERLGAEGWKALDVGPRCPVDHGRKGGA
>gi|319761565|ref|YP_004125502.1| hypothetical protein Alide_0849 [Alicycliphilus denitrificans BC]
MSRAPSRADAAQAAVLAELRPGQSVELLKELHILTREGRLNQDSRRKLKQVYHLYQFIEPLLQELAQDGH
APLLADHGAGKSYLGFILYDLFFKPLGRGEIYGIEWRAELVQRSRELAARLGFGRMRFLDMSVADAAETA
DLPERFDIVTALHACDTATDDAIAFGLRKHARFMVLVPCCQAEVAACLRQTKALSLSRTPLAELWRHPIH
TRELGSQITNVLRCLHLEASGYQVTVTELVGWEHSLKNELILARYTGQKKRSASERLAAILEEFGLAQAL
AGRFGLDQKE
>gi|319761566|ref|YP_004125503.1| methylmalonate-semialdehyde dehydrogenase [Alicycliphilus denitrificans BC]
MTQPTTLHHFIGGKPYPSKSAEWRDVTNPATQEVVARVPFATREEVELAVANAQEAFQTWRETSLSARMR
IMLKLQHLIREHQAEIAQLITREHGKTLPDAEGEVGRGLEVVEHACSITTLQLGEIAENAATGVDVYNLL
QPLGVGAGITAFNFPVMLPCFMFPMAIACGNTFVLKPSEQDPSSTMRLVELAHEAGVPPGVLNVIHGGPE
VADMLCDHPDIKALSFIGSTHVGTHIYRRASEAGKRVQSMMGAKNHCVVMPDAPKEHALNNLLGSAFGAA
GQRCMANSVAVFVGAARDWLPELVAKSKAMKVGPGTDRSADLGPLVNPRAKQRVLGLIDSGVAQGAKLLL
DGRACTVPGYEQGNFVGPTVFADVTDQMDIYQQEIFGPVLNVVCVDTLEDAIAFINRNPNGNGTSIFTSS
GWAARKFQHDINVGQVGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAVQFWTQTKTVTARWYEDHGSS
SDAVNTTITMK
>gi|319761567|ref|YP_004125504.1| branched-chain amino acid abc transporter periplasmic protein [Alicycliphilus denitrificans BC]
MRPMRHSLALAALALCAGAQAQISDDVVKIGVLTDMAGPYSGMGGAGSVVAAKMAIDDCLKAECKGMKIE
VVSADHQNKADIAATKAREWLDRDKVDALADLTNSAGALAVQKLIKEKGGIAMYSGPATTRLTDEDCAEN
GFHWMFDTYSSASGAAAALTRNGDKSWFFVTVDYAFGHSLEKDASDMVKANGGTVLGSVRHPLNASDFSS
FILQAQNSKAQVIGLANGAQDTVNAIKAAREFGIGTGKSGQKVASLLMFLTDVHSLGLKQAQGLMFSEGF
YWDMDDKTRAFSTRFEKLHKGFKPTMVQAGVYSSVRHYLKSVAAAKTDDWKTVAQKMRELPIDDPVMRNA
SIRPDGRVIHDMYLFQVKAPGESKGPWDYYKTVSTIPAQIAFKPLAQSACPLVKK
>gi|319761568|ref|YP_004125505.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MAIDRINWDNLRLFLAVVRAQSAQEAARRMEVDHSTITRRLHRLEKELGAQLFERTPAGHLLTPAGQRLL
EHVERMESSMVLVGEDIGGDSHMLTGHVRLGATEGFGSFFLAPHLSYFCDRHPGIQVELLIVPRFINLSQ
READLAVNIERPQRSGQVCSKLTDYRLRLYASRSYLQGQPPIRRLRDLAAHRFFGYVEELVFSQELRYLT
SIMPDAPMSLRSTSVVAQYNAVREGRGLAVLPCFMAAQCAELEPVLPHEVDVLRTFWLAAPADRRELARV
RALWDYLRELVECNQPFLLGDAPVWQRV
>gi|319761569|ref|YP_004125506.1| hypothetical protein Alide_0853 [Alicycliphilus denitrificans BC]
MARLPRLTLAGYPHHVIQRGNNRQAIFVDRQDFETMLALLAESAQKFRVAVHAYVLMDNHFHLLATPATA
DTLPQMMQAVGRSYVRYFNDRHGRSGTLWEGRYRSTLIETERYLLACMAYIDLNPVRAGMVAQPLAWPWS
SHAHYLGQRSDKLVTPHTLYWALGNTPFAREAAYAELVQAGIAGAEQAALTDATLRGWALGGADFVAELQ
KKSPRRVTKARPGRPAAAAEDTTKLD
>gi|319761570|ref|YP_004125507.1| glutamate synthase (ferredoxin) [Alicycliphilus denitrificans BC]
MTKAAEIQHLQQHGLYASSNEHDACGLGFVAHIKGVKRHDIVTGALKILENLDHRGAVGADKLMGDGAGI
LIQIPDQLYREEMAGQGVELPPAGEYGVGMVFLPKEHASRLACEQELERAIKAEGQVLLGWRDVPVNRDM
PMSPTVREKEPILRQVFIGRGADVIVQDALERKLYVIRKTASAAIQSLGLKHSKEYYVPSMSSRTVVYKG
LLLAAQVGEYYLDLADERCVSAIGLVHQRFSTNTFPEWPLAHPYRYVAHNGEINTVRGNYNWMLAREGVM
ASPVLGEDLKKLYPISFAGQSDTATFDNCLELLTMAGYPISQAVMMMIPEPWEQHESMDERRRAFYEYHA
AMIEPWDGPASIVFTDGRQIGATLDRNGLRPSRYVVTDDDLVILASEAGVLPVPDSRVLRKWRLQPGKML
LIDLEQGRLIEDDELKANIVNTKPYKQWIENLRIKLDSVQVPAGLQSPAPSALPLLDRQQAFGFTQEDIK
FLLAPMAANGEEGIGSMGNDSPLAVLSERSKPLYNYFRQMFAQVTNPPIDPIREAIVMSLVSFVGPKPNL
LDINQVNPPMRLELHQPILDFEGMAKLRQIEQFTHGKFKSATIDITYPLAWGKQGVEAKLASLCAQAVDE
IKGGANILIISDRNLGATQVAIPALLALSAIHQHLVREGLRTTTGLVVETGTAREVHHFAVLAGYGAEAV
HPYLALETLVDMHQDLPGALSADKAIYNYIKAVGKGLSKIMSKMGVSTYMSYCGAQLFECVGLNSDTVAK
YFTGTASRVEGIGVFEIAEEAIRTHVAAFGDDPVLETMLETGGEYAWRARGEEHMWTPDAIAKLQHATRG
GNFSTYKEYAQIINDQSRRHMTLRGLFEFKFDPAKAIPIDEVEPAKEIVKRFATGAMSLGSISTEAHATL
AVAMNRIGGKSNTGEGGEDPARYRKELKGIPIVQGETLASVIGADKVAADIALQDGDSLRSRIKQVASGR
FGVTAEYLSSSDQIQIKMAQGAKPGEGGQLPGGKVSEYIGQLRYSVPGVGLISPPPHHDIYSIEDLAQLI
HDLKNVAPHAGISVKLVSEVGVGTIAAGVAKCKSDHVVIAGHDGGTGASPWSSIKHAGSPWEIGLAETQQ
TLVLNRLRGRIRVQADGQMKTGRDVVIGALLGADEFGFATAPLVVEGCIMMRKCHLNTCPVGVATQDPVL
RAKFSGKPEHVVNYFFFVAEEARQIMAQLGVRTFDELIGRTDLLDTRKGLAHWKAQGLDFSRLFAQPQAP
SDVARHHVEAQEHGLEKALDVKLIERCQPAIQHGENVRLMEVARNVNRSVGAMLSGAVTKAHPEGLPDDT
IRIHFEGTGGQSFGAFLCKGITLNLTGEANDYTGKGLSGGRIIVRPSHEFRGESTANTIVGNTVMFGATS
GEAFFAGVAGERFAVRLSGATAVVEGVGDHGCEYMTGGTVVVLGRTGRNFAAGMSGGVAYVYDEDGRFDG
RCNLSMVALERILPADEQVASVDPGHWHRGQTDEEQLKKLLEAHSRYTGSRRARDLLDNWAAARSRFVKV
FPTEYKRALVEMYERKVLEEQATPAQAASKNEAVAAK
>gi|319761571|ref|YP_004125508.1| glutamate synthase, NADH/nadph, small subunit [Alicycliphilus denitrificans BC]
MGKTTGFLEYERIEEGYPAPAERVKHYKEFVIGLSSEQAKIQAARCMDCGTPFCNNGCPVNNIIPDFNDL
VYHQDWRSASTVLHSTNNFPEFTGRICPAPCEAACTLNINSDAVGIKSIEHAIVDRAWAEGWVQPQLPRH
KTGRKVAIVGAGPAGLAAAQQLARAGHDVTLFEKNDRVGGLLRYGIPDFKLDKGHIDKRVRQLVAEGVQI
RTGVFVGSEKDGLGQGSKVTNWSTETVTPAQLQAEFDAVLLTGGAEQSRDLPVPGRDLAGIHFAMEFLPQ
QNKVNAGDKLKGQIRADGKHVIVIGGGDTGSDCVGTSNRHGAKSVTQFEVMPMPPEQENKPLVWPYWPLK
LRTSSSHDEGCVREFAISTKEFTGHKGKVTGLKTVQVEFKDGRFSEVPGTEKEYPADLVLLAMGFVSPVA
AVLDAFGVDKDARGNARASTDFIGGYATSVPKVFAAGDMRRGQSLVVWAIREGRQAARAVDEFLMGASDL
PR
>gi|319761572|ref|YP_004125509.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC]
MKKIAAVALLSLGAVLAGCSKQENAPAPAAAPAPAAVTQIVVGLDDNFPPMGFRDEKNELVGFDIDMAKE
AAKRLGLQVEFKPIDWSAKEAELSGKRVDVLWNGLTITEERKQNIAFTAPYMENHQIIVVPAGSAIKAKA
DLAGKVVGAQEGSSAVDAIKKEDAVFKSFKEFKTFGDNVTALMDLSTGRLEAVVVDEVVGRYYVAKKPDQ
YEVLDDNFGTEEYGVGLRKDDTELHGKLDKALADMKADGAAAKIAEQWFGKNIIK
>gi|319761573|ref|YP_004125510.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MMDYVLSLLGPLAQGATVTLKLFVITLALAVPLGLVLALARLSRWKALSGAVNGYIWLMRGTPLMLQMLF
IYFALPFVPVVGVRLPDFPAAVTAFALNYAAYFAEIFRAGIQSVDRGQYEAAKVLGMSYGQTMRRIVLPQ
MVRSILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFIVAAAFYLLMTLVLTWGFQRLE
QRYAKYDQ
>gi|319761574|ref|YP_004125511.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MPNTTSDVPMIEARGVVKRFGHNVVLRGVSLSVARGEVVAVIGPSGSGKSTFLRCLNHLETIDGGHVAIE
GEPLATTDARGHCRYVLDAEVRRICAKTGMVFQHFNLFPHLTVLENLIEAPMVVQGLPRAEAVARAEKLL
DKVGLSQKRDNYPARLSGGQKQRVAIARALAMQPDIMLFDEPTSALDPELTGEVLRTMRELAEERMTMLV
VTHEMGFAREVAHRVAFMDQGELITARPAQEFFADPGHERARAFLEHML
>gi|319761575|ref|YP_004125512.1| hypothetical protein Alide_0859 [Alicycliphilus denitrificans BC]
MNLAPLPAQHAQRVLLHNEVHARPPEAMAAPLAISHIVMLADAADRDASRAHLAALLRDHHLAPPDAHTT
HLRADLGAFRIRWELHTEFVTWTFTVVPVGGIHAGEGRAPAAALEAVPRDWLALLPGECLCALHLWVAAG
GGWSATPAQRGWLREESLVASAVAEGQGEVYTDFAIHADGFSRMLLVAGALSHQRLGRLVQQLLEIETYR
MAALLGLPAAREAGAALASAECELAALAEAIRSSRRDAEPALLDRLTWLAGQVEGQYAATHSRFSASSAY
FELVDRRIQDIAESRIAGLQTIGEFMERRLSPARSTCAWAARRQNALSERVSRMSSLLRTRVEIEQQQNN
QALLVAMNRRGDLQLKLQSTVEGLSVAAITYYIVGLVSYLAKGAQKIGWPFSPESTAAVAIPLVAASVWW
SLRRLHHRMFGEAH
>gi|319761576|ref|YP_004125513.1| spermidine synthase [Alicycliphilus denitrificans BC]
MSGTPAAQATLYVAERLNADFGFYLSCGRPLAERRSAWQHIEVFDNAQFGRVMRIDGCFMTSERDEFFYH
EPMVHLPAIAHPGVRTALVVGGGDGGAAEEMLKLPGIERVVLAELDGDVVAMAREWLGAIHRGAFDDPRL
QLRLGDARDLLVQGGERFDQIVLDLTDPFGPAVELYTVEFYAACRRALNPGGVLSLHLGSPIHLPETMTR
IAASVRAVFPVFRPYLQYVPLYGTLWCMAMASNDTDPALLGASEVDARIAARGLHGLQLYNGAMHQALLA
QPNFVRALLARPTRPLRSGDVLDEVRDPSELPPVTVTTG
>gi|319761577|ref|YP_004125514.1| s-adenosylmethionine decarboxylase proenzyme [Alicycliphilus denitrificans BC]
MKNLQSVVPIAPAATPRKATGLHLIGDLYGCLCDSRLMLDAEYLETFCKERVAAAGLTAVGSLFHSFGEG
GGVTGVVVLAESHLSIHTWPEAGYVTLDVYVCNYTANNRPKAQKLFDDLQAAFNPKDPHLHRVDRA
>gi|319761578|ref|YP_004125515.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MQPQSPASSDALVELCNVTFGYGERVILRDLSLTVPRGKVTALMGASGGGKTTVLRLIGGQQRAQQGEVL
VAGQDVGRMDTAQLYAARRRMGMLFQFGALFTDMSVFENVAFPLREHTDLPEELIRDIVLMKLNAVGLRG
ARDLMPSQISGGMARRVALARAIALDPELIMYDEPFAGLDPISLGTAAQLIRQLGDAMGLTTIVVSHDLE
ETFRLADHVIILGPGTVAAQGTPEEVRASTDPLVHQFVHALPTGPVPFHYPGPSVAQDFGPVGAQHQDGG
TP
>gi|319761579|ref|YP_004125516.1| hypothetical protein Alide_0863 [Alicycliphilus denitrificans BC]
MSWWRPSHVGYAVRSKLADLGMGARLFVRLVGLFGTAMRRFGLVRDQVHFLGNYSLSIIAMSGLFVGFVL
ALQGYNVLQLYGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAEIGLMRAGEQLSAMEMMAVDPV
QRILAPRFWGGVIAMPLLAAVFSAVGVIGGWLVGVVLIGVDGGAFWGQMQSSVDVWKDVGNGVVKSVVFG
VAVTFIAVLQGYMAKPTPEGVSRATTRTVVMASLTVLGLDFVLTALMFSI
>gi|319761580|ref|YP_004125517.1| mammalian cell entry related domain protein [Alicycliphilus denitrificans BC]
MQHSKNDIWVGLFVLLGGAALVFLALQSANLLQLNFRSGYVITARFDNIGGLKPKAAVRSAGVVVGRVQS
ISFDDKTYQARVALEIEKRYAFPKDSSLKILTSGLLGDQYIGIEPGAEEDNLADGSMVTNTQSAVVLENL
IGQFLYGKAEQGAAPAGGGGKK
>gi|319761581|ref|YP_004125518.1| vacj family lipoprotein [Alicycliphilus denitrificans BC]
MTTDSRSRTRAARWAALLLGAALATGCATGPNANPADPFEPYNRGMTRFNENVDKAVLKPVATVYRDVTP
RPVRTGVGNFFANLGDAWSFVNNLLQARGLEAYESLVRFSTNTVFGLGGLLDIASEAGIERHKQDFGLTL
GRWGVPTGPYLVLPLLGPSTVRDTAALPVDYFVGDPVGYVNDVPVRNSLDGLRFVDKRASLLHATSVLDE
AALDSYSFTRDVYLKLRGGAKAGADDEEGGKLPDDY
>gi|319761582|ref|YP_004125519.1| toluene tolerance family protein [Alicycliphilus denitrificans BC]
MTNRRTLMQSAAALVVAAGLPWHQAALAADEAPDALIKRLSADVLETVRNDKSIKSGDVDKIMVLVNKAI
LPHVNFRRMTAAAVGPAWRSATPEQQKRLQDEFKTLLVRTYSGALSQVTDQTIVVKPLRAAPGDTDVLVR
TEIRGRGDPVQLDYRLEKTPGEGGGWKIYNLNVLGVWLVDTYRPQFAQEINAKGVDGLIETLAARNKANA
GTNAGVAGAK
>gi|319761583|ref|YP_004125520.1| sulfate transporter/antisigma-factor antagonist stas [Alicycliphilus denitrificans BC]
MLVLPAELTHRQASVSLRMLLQALKAQGEQQVVVDAGALATFDSSALAVLLECRRVAVSEGKGFMVKALP
PALASLAGLYGVQELLPSLG
>gi|319761584|ref|YP_004125521.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MSKPEPGAAPSGPAPDPFRQLLDEVGAFVYTIDLQGCYTYANRLVLELLGHPLDYVLGKDISHFFGEKSN
QVIRENDARVLRGGETIAREETNLIKATGELRTYWSMKKPLRDAAGNIVGMLGISHDITEKKRLEDRVRK
QKELLDTVLDNVDALVYMKDANRRFVYANQHMADVLGLPVERIVGSLDTDLLPRDLADRFWAMDQKIFAS
GQRQSSEEAVVDACGRLRHYWRVVVPLPAPDGTPAVIGLSTDITELHELKEELRRQASTDGLTGLANRRS
FCERAGHEFARSRRHGTPLSLIAIDIDHFKRFNDSYGHPLGDRVLCAFAACCQSMLREADLCARTGGEEF
CILLPDTGLDDARRIAERIRVSAGSLCVDGQSPQLRISASFGVASLESGDQAFDTLFSRADRALYCAKQQ
GRDCIFAWPGG
>gi|319761585|ref|YP_004125522.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MTAVSFQSVSKTFPTPRGPFQALHGVSLDIEEGEFFGLLGPNGAGKTTLISILAGLSRATQGRVTVLGHD
VQADFARARQCLGVVPQELVFDPFFNVRETLRLQSGYFGVKNNDAWIDELLESLGLADKATANMRQLSGG
MKRRVLVAQALVHKPPIIVLDEPTAGVDVELRQTLWQFIARLNKQGHTVLLTTHYLEEAEALCGRIAMLK
NGRVVALDSTSELLQSANASVLQFKTDAPLPAALARLARVTGRIVQLPAHDAAEIEHHLAALREAGVASE
DVEIRRADLEDVFIKVMGSEAAEAVA
>gi|319761586|ref|YP_004125523.1| abc-2 type transporter [Alicycliphilus denitrificans BC]
MTGWQTLFYKEVLRFWKVAFQTVAAPVLTAVLYLLIFSHVLEDRVQVYGQLSYTAFLVPGLVMMSMLQNS
FANSSSSLIQSKIMGNLVFVLLTPLSHWAWFTAYVGSSVLRGLLVGLGVFAVTLAFARPAFSALPWVFVF
ALLGAALLATLGVIAGLWADKFDQMASFQNFLIMPMTFLSGVFYSIHSLPPFWQHASRFNPFFYMIDGFR
YGFFGVSDVSPWLSLAIVGGAWLAVSFLALRLLRTGYKIRN
>gi|319761587|ref|YP_004125524.1| bola family protein [Alicycliphilus denitrificans BC]
MTADQIKDIISAAMACDYITLEGDGRHWYAVIVSAEFEGKRPIQRHQRVYATLGDKMQRDEVHALSMKTF
TPAEWAAARQQA
>gi|319761588|ref|YP_004125525.1| udp-n-acetylglucosamine 1-carboxyvinyltransferase [Alicycliphilus denitrificans BC]
MDKLLVRGGRALRGEVVISGAKNAALPEMCAALLTDEPVHLINVPRLHDVRTMRRLLDNMGVKTETHGER
GGMSFVAPDALSPEAPYELVKTMRASVLALGPLLARFGEATISLPGGCAIGSRPVDQHIKGLQAMGAHIV
VEHGYMIAKLPAGQQRLRGARITTDMITVTGTENLLMAATLAEGETVLENAAQEPEVTDLAEMLIAMGAR
IEGHGTSRIRIQGVERLHGCTHQVVADRIEAGTFLCAVAAAGGEAFLRHARADHLDAVIDKLLEAGARVA
AEGDGIRISSPGGAELKAQSFRTTEYPGFPTDMQAQFMALNVVAQGTAMVAETIFENRFMHVNELARLGA
QIAIDGRVATVTGGARLSGATVMATDLRASASLVIAGLIASDETLVDRIYHLDRGYDAMEAKLRGLGADI
ERIQ
>gi|319761589|ref|YP_004125526.1| ATP phosphoribosyltransferase [Alicycliphilus denitrificans BC]
MTQQITLALSKGRIFEETLPLLAAAGIEVLEDPEKSRKLILPTSRPEVRVVLVRATDVPTYVQYGGADLG
VAGKDSLIEHGGQGLFRPLDLQIAKCRVSVAVRAGFDYRAAVTQGSRLKVATKYTSIARDFFSAKGVHVD
MIKLYGSMELAPLTGLADAIVDLVSTGNTLKANNLVEVEQIMDISSHLVVNQAALKLKQAPLKRIIDAFA
SAVPQG
>gi|319761590|ref|YP_004125527.1| histidinol dehydrogenase [Alicycliphilus denitrificans BC]
MQFVAAPARLSTVSDAFEADFAARLHWSADQDAAIEERVAAILADVQQRGDAAVLDYTRRFDGLQADGVA
ALELTQAELKAAYDGLPDAQRQALSAAAARVRSYHEAQKKACGESWSYRDEDGTLLGQKVTPLDRVGIYV
PGGKAAYPSSVLMNAIPAHVAGVPEIIMVVPTPRGEKNPLVLAAACVAGVTRAFTIGGAQAVAALAHGTA
TIPKVDKITGPGNAYVASAKKRVFGQVGIDMIAGPSEILVLADGSTPPDWVAMDLFSQAEHDELAQSILL
CPDAAYIDAVQREIDRLLPQMPRAEIIARSLTGRGALIHTRSMEEACEISNRIAPEHLEVSSRDPHKWEP
LLRHAGAIFLGAYTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLIEVSEQGAQALGRIASVL
AHGEGLQGHARAAEMRLK
>gi|319761591|ref|YP_004125528.1| hypothetical protein Alide_0875 [Alicycliphilus denitrificans BC]
MKNLTITVEDSVLEWARVEAARRGTSVSRMVGDFMAEMMQREDAYERAYLAWRTDERGWQGPAAADAPEM
QARSASLKRTGGQKRPRNGAAA
>gi|319761592|ref|YP_004125529.1| hypothetical protein Alide_0876 [Alicycliphilus denitrificans BC]
MSAMGTVFVDTSVLIAAEDVAGGDLYRATLDWLDALWRMRTGRTGNQALVEFYDQVTTAATPMPQGDARA
AIRRYQTWAPWKTDAATLETAWAVQARHQLNFGDCLAVACAQHSGCSHMLSLHLPHGAEFGGVTVLHPLR
QPAPAPQEGA
>gi|319761593|ref|YP_004125530.1| histidinol-phosphate aminotransferase [Alicycliphilus denitrificans BC]
MTDATPQSLALQRIRADVRAMHAYAVHDATGYLKMDAMENPFGLPPALQAALGQRLGQLALNRYPGTRQN
DLKAALAAHALAPEGSALILGNGSDELIGLVQLACARRDASGPAKVLAPAPGFVMYAMCAQQHGLQYVGV
DLDGEFQLREQAMLDAIAEHRPALTFLAYPNNPTATLWDEAVVQRIADAVAAVGGIVVMDEAYQPFASRS
WIDRMRAEPVRNGHVLLMRTLSKFGLAGVRLGYMIGPAALVHEIDKLRPPYNVSVLNCEAALFALEHAGV
FAAQAAELRAARTDLLAALRAMPGVEKVWDSQANMVLVRVADSARAYEGMKARKVLVKNVSTMHPSLANC
LRLTVGSHADNAQMLAALQASL
>gi|319761594|ref|YP_004125531.1| imidazoleglycerol-phosphate dehydratase [Alicycliphilus denitrificans BC]
MTSSALVTSSPDPCADRTAEVSRNTAETRISVRVNLDGTGQASLHTGIGFFDHMLDQIARHGLIDLDVRC
DGDLHIDGHHTVEDVGITLGQAFARAVGDKKGIRRYGHAYVPLDEALSRVVVDFSGRPGLHLHIPFTAAS
IGGFDTQLTYEFFQGFVNHAGVTLHIDNLKGINAHHQCETVFKAFARALRAALERDPRAAGVIPSTKGSL
>gi|319761595|ref|YP_004125532.1| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit [Alicycliphilus denitrificans BC]
MNSEVKTVVVVDYGMGNLRSVSQAVQAAAEGSGWRVAVSASPEQVRAAQRVVLPGQGAMPDCMRELRESG
LLEPVLEAAASKPLFGVCVGMQMLLDHSAEGDTPGLGLIPGEVLKFDLAGRTQPDGSRYKVPQMGWNRVR
QIRHAGIVHPVWAGVPDDSYFYFVHSFYARPADPAHVAGEADYGVPFAAAIARDNIFATQFHPEKSAEHG
LALYRNFLHWNP
>gi|319761596|ref|YP_004125533.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Alicycliphilus denitrificans BC]
MLLIPAIDLKDGHCVRLKQGDMDQSTTFGEDPAAMARKWVDAGARRLHLVDLNGAFAGQPKNKAAIKAIL
AEVGSDIPVQLGGGIRDLDTIERYIDAGLEYVIIGTAAVKNPGFLKDACSAFGGHIIVGLDAKDGKVATD
GWSKLTGHEVVDLARKFEDWGVESIIYTDIGRDGMLSGINVEATVKLAQALTIPVIASGGLAGMADIEKL
CEVEDEGVEGVICGRAIYSGDLDFAAAQARADELAGA
>gi|319761597|ref|YP_004125534.1| hypothetical protein Alide_0881 [Alicycliphilus denitrificans BC]
MHLRSRPSHSLAASLLTLAAALTGCGGGSGQGSDSGSSPAASSAEVAFTAPAEADNVHTVNTPVQLQLSV
KIAGAAAPDGTAITLSGPASASFAPVQPQTRGGVATSSLTAAQAGEMQLQALAAATQDKAGAATRTLYIR
SQPQPLELLVPAYFSAGPGSDWEKLASGAQSFPAVPITAILNPSNGIFTKEDPLFTAAITAFRQNGGKVL
GYVYTRYGTGARSVADIQRNIDNYRKIYGTQVDGFFLDEMDATSKQLGFYREIYQYIKGLDSRLRVVGNP
GTYPVADSASVVDALVSFEGQAVDYRSVTPQPANKWVYNLANGAQAALVHDAANCGAMQEVLRSANTPQR
NTGLVYATDRHYDYPTNTGNPWATLPAYWEQMLGTADAINKGRALPGC
>gi|319761598|ref|YP_004125535.1| transmembrane protein [Alicycliphilus denitrificans BC]
MAGIGFELRHMLRKNTLLSLVQAYAYAGVIGSGPWVLSIVGILLVGIFSASVVVPATLVTQFQTSVTYLV
ASSLIYTSLVQLAFTRFISDRLFEKHKHLVMPNLHGLMVIVLLGAGVLATLALFIVLPGLGLAYRLLMLA
GFMLMSGVWVLTVLLSGMKRYKAIVGLFGLAYGLIVASALLLRPWGLEGLLGAFVLGHFVLLAGMWLLVV
KEFHPARQLISFDFLQPDKLYPSLVAVGLLYNLGIWADKFMFWFFPPTSQPIIGHLRASLIYDLPVFLSY
LSIIPGMAVFLVRIETDFVEYYDKFYDAVRGGGSLEYIEAMRDEMVYAIQQGLGEIAKIQTLAVLVTFVA
GPWLLDTLGISRLYLPLLHVQVVGAGLQVGLMAVLNVFFYLDQRRTVLLLCAMFVLLNVALTGLTLAFGA
ALYGYGFALATLLTLAAGLLLLSRRLHRLEYQTFMLQ
>gi|319761599|ref|YP_004125536.1| glycosyl transferase group 1 [Alicycliphilus denitrificans BC]
MNHPKAQSADIALMLEGTFPYVSGGVSSWINQIIRAYPEYRFAIVFLGSRREDYGGFKYPLPDNVVHFEE
HFLHEQAHWHPQPAARRGDAQGQALVQRLLDAFDQGPAAPRAMEAFREVAQQMMPGGSVQLGDFLYSKRA
WDIICGIYRAHCADPSFVDFFWTVRLMLQPLWLLARVARQLIPVRAVHCASTGYAGFLGALLAQTRGVPL
ILSEHGIYTKERKIDLFKSEWIRDNRNIFQRDPTELSYFRQMWIHFFEWLGRYCYAHADPILALYEANRL
RQVQDGAAPERTANIPNGIKLERFAPLRAQRPLEPPPVLCLIGRVVPIKDIKTFIRAMRRVVNQRPDAQG
WIAGPAEEDPAYAEECSNLVRSLGLQEHVRFLGMQRVEDLMPRIGLVVLSSISEALPLVLLEGYAAGVPA
VSTDVGSCRQLLEGLDEEDRALGPSGAVVPIAEPQQLADAALQLLGDTAAWQAASRAAIARVERYYTDTL
MFDRYRQVYEHALARTPGAA
>gi|319761600|ref|YP_004125537.1| transmembrane protein [Alicycliphilus denitrificans BC]
MLNLKLGLSALGLEVSAWSGAWLLAERSDAALASYLLLHAAASVLLSLSLLPLLPPRLSKPRWATLLLMT
ACSYAVPVAGFLGVIAAFVILRLYRRRSLPEDFDAVQLPEFDQHQRRQSQFRHAGLHSFLTNAQVPVQAR
MRAMAALQYASGRTASPLLRSVFGDASEDLRLLAYGMLDNLEKRINRAIDSELDALQAALPDSSQQLQSA
HRLSDLYWELVYQALVQGDLHAHAIQESLRYCQLVLQRQEGNAAMHLRRGRLLHALGRTQEAEHAYDKAR
ALGLPATRVLPYLAQLAFERRDHAQAQALMRELRQWGALPRLRPVIDYWSQRP
>gi|319761601|ref|YP_004125538.1| transmembrane protein [Alicycliphilus denitrificans BC]
MPTPSDSPGARRQTAGENARPRALPGTGLPRHLLGRLAIAATHPAVTVGETLLLPLLAVALGLAWAPQDP
LQIQATFPWPWLAPVVLALRYGPMAGLGGASVLLACWLGLNAGHWGNFPQLYFLGGLILVMLVGEFSSLW
QARTRRAETLQLYLDQRLEHLVRQHYLLRLSHDRLEQELIARPMSMRDALAALRHAGSEDGGDALAPQAL
LRLLSQYCQLECAAMHAVSDGHAAARPSASIGAYDGLHADDPLVRQALQTGQLCHVSQAVTAQQDTRYLV
AAPLLDLAGDMYGLLVVQDMPFFALQEESLQTIQLLLGYYTDGLSMSQLAQPIVQQFPDCPPLFAFELQR
LAHIHRSTQVPSIVVALELQQRALEQDLPPQIERLKRELDEVWRIEAPGRQVLAVLMPLGNATTAEGYIH
RLEGWMQHKSQQSLAQAGIFPHVVQPDSAQPVRTVQRLHAIAHA
>gi|319761602|ref|YP_004125539.1| lipoprotein [Alicycliphilus denitrificans BC]
MLHRRPSRARQLGLLLATGAIALLSACSTLDQGHPPQLARQASWVVLPFANHTETPLAGQRAEAIAQALL
SAQGVGQVRRTPATTQQEALFGAGDAQRSEDALAWAREQKIRYALAGSVEEWRYKVGVDGEPAAGVTLQI
LDVATGDTLWSGSGGQSGWSREALSAVAQKLIRKLLQSGLAGSR
>gi|319761603|ref|YP_004125540.1| tpr repeat-containing protein [Alicycliphilus denitrificans BC]
MACGALWLLYPRQDLEQRLATSGETELSTAYLNNLLRSDPDNPRLRLLLAQRQIAHGDTASARTTLQPAL
DSADPALRKEALWAQWDLLHSEYRHVPDREPDRRLALLDGLRRHIRQLAQESWPQERQDRLAALAGQFGE
QEIALALSRREAPQDPREAALYYEREAREALARGDYEGCAQLYLSARDSTPDPAQAKAYYGAAIAALRSG
NQTAAALELAERELGPLADDPQTLFMLTQLARAAGRPDVAEHYVRRLLRMALERQATQWASAEQDFALRP
VAWRPQPPAALAGPVFDDGADLLVHPALRLAQQVADKASARPSPALPFDDKTYTLGYEVFLENRKLEDAW
TIANAAVRQNPADMRWRERLAQVSEWTQRPGIALENWLVLARQTNQDAAWQAVLRLAPGQFDDAALVQAL
RHQLRSRSGDPRLMRALVDAQERLGEPQPAIDYLRQHAQDPEALELLAQLAERAGQPDLALQTWRQLLAD
PAQITPERAMHAAVLALQHRQPELGLQWLQAVQDHPPASAEAAAELWRFTGDLARSRARDQLAIAAYRKL
VDAQHADVADYDALIGLLQQDQPLEAAKVALLAWQQHDEPRHLIEALTLYSSRNQWNEFAHALDQLDPTP
DAARHSLARMRRSGQFLRLVGGYHHNAGRFAEARQYYEEGLAIDPASSDMRQALLWLLIDSNDAASIRRL
LAAHEQAWSADEDLHEALAAAYQALSLPQVALHRYLSPHVAEREGDFLWLMNYADALEQNQEADRAWRLR
RHLLSQQWQEGRNGRRLTPAQARQRWLTEEGLEATQRVARARLILLQRPGDPAQEVLRELLRLDRDAQGG
YSNAAAETAIGWLQDAGEYTAERGFLWHQYARSRSLRTNRPLWAEITVALAEDDKAAAGQLLQEFDERLP
RYDRVNTAAAVGDIRLAQSAAFETQESQPDDNPLHLQLTDNLLAFSDHAGMLSRHSDLGAIDEDQAEARL
HLAISPRLSLDLDASRIQRRVTAPDQLRDAPGEDIAGALLRWGHADGETRLRVASRRGYADTTPLSIEHE
QRLDNRLSLRGELGWHLPSEESLALRLGGMKTRVAAHLRYQATRQDSLLLSQWSEQYRLQTGAEVGRGRH
TAIEYSHAYRQDAPTWEWGAFWSTHRFERRHPFFLGQQGQDFLQRFAPAGVTSLGLDYFLPESFQFYGVR
LSTNMRFEQDHTRALRPFASVSLTRHSLLGAGYDLRLGLAGSVLGPDHLRLSFGLGKSGVQSLGLTRVLE
LSYRLHF
>gi|319761604|ref|YP_004125541.1| tm1410 hypothetical protein-related protein [Alicycliphilus denitrificans BC]
MAFRFLLQLLQLCTRLAWGLALLPLAWSAQAATPAVALYYGHEIPLGEFRAFDLLVVDPDHEAARQARAL
EPATKVYAYVSVTEVQPSRGYHADIPADWKLARNQDWQSEVIDQSVAAWPDFFASRVVAPLWERGFRGFF
LDTLDSYRLAGTFDEQAQQQGLVRVIETLHQRFPGIRLILNRGFDILPQVRGMVEMVAAESLYQRWNAKT
RRYEEVPNQDRQWLMDQLRTVRQRDGLPVLVIDYVSPHDRALTRATAQRILQDGFIPWVTDAQLATIGMG
SIEPVPRRVLVLYNGGESPALNYANAHRFLQMPLNHMGYVTDYVDVRDSLPGLMARDRYAGVVSWFSGYV
PAAKRAGLSQWLQARIHEGMPLAVVGDWGMTPDRVLTRSLGLALDRAEPQGALRQVQLAPMMGLENPLPL
PSRQTELVQLAPDMARQAQPLVELRDARGRTFVGGAITPWGGFILDPNVLFEIPGTEDARWLVDPFAFLQ
QALRLPAIPVPDTTTENGRRLLLAHVDGDGFPSLAEFPGSPLAAQVLLKEIFEKYRIPQTMSVIEAEVAP
DGLYPGLSPRMEEVARKIFRLPHIEVGSHTYSHPFLWDANVQHGLFKENPEAAQSLVVPGYTMDLEREIV
GSSHYINERLAPSGKPVKVLQWTGDTAPSARALEITHRAGLLNINGGDTSISRANPSLTAVGALGIRKGG
FLQVYAPITNENIYTNLWTGPYYGFERAIETFEMTDSPRRIKPVGIYYHTYSASKPAALKALKKVYDWAL
AQPLHPVHASEFVTKVQDFYDYAMARDGEGWRLRSSNGALRTVRLPPALGLPRLGASQAVAGWRRGGEGL
YVHLSGPSAFLQTDGREAATPYLHDANARLVDWQAEGDGRRVQFTLQGHVPLEFALANTQACQVRAGQRT
LTALRPAAQDRTAVQQFKLPDAAAQIQILCPER
>gi|319761605|ref|YP_004125542.1| udp-glucose 4-epimerase [Alicycliphilus denitrificans BC]
MILVTGGAGYIGSHMCVALAQANEPFLVLDNFGNSRPSVLERIGRITGREPECVRGDVRDAALLQQLFAR
HEFTAVIHFAALKAVGESVREPLAYYDNNVVGTVTLLQAMRQAGVRQLVFSSSATVYGDPASLPIREDCP
LSATNPYGWSKLMMEQVLADVDASEPGQWRIARLRYFNPVGAHESGLIGEDPQGVPNNLMPYVAQVASGQ
RELLNVWGSDYPTPDGTGLRDYIHVCDLAEGHVAALRYLREHPGLLTVNLGTGRPVSVLEMVRGFEQASG
RPVPYRLAERRPGDVAACWADPGLAERLLGWRATRDVQAMCQDAWRWQDGVARTLQPA
>gi|319761606|ref|YP_004125543.1| imidazoleglycerol phosphate synthase, cyclase subunit [Alicycliphilus denitrificans BC]
MLAKRIIPCLDVTGGRVVKGVNFVELRDAGDPVEIAARYNEQGADELTFLDITATSDGRDLILPIIEAVA
SQVFIPLTVGGGVRTVADVRRLLNAGADKTSFNSAAIANPDVIDQASGKYGAQCIVVAIDAKRRQGQEVA
ERGEGWDVYSHGGRKNTGLDAVRWAEEMARRGAGEILLTSMDRDGTKSGFDLQLTRAVSDAVGVPVIASG
GVGNLDHLADGVQQGGADAVLAASIFHYGEFTVRQAKEHMRARGIPVRL
>gi|319761607|ref|YP_004125544.1| phosphoribosyl-amp cyclohydrolase [Alicycliphilus denitrificans BC]
MNWLDQVKWDAQGLVPVIAQEAATGDVLMFAWMDREALQKTAELGRAVYYSRSRARLWFKGEESGHVQQV
HEIRLDCDNDVVLLKVTQLGHEPGIACHTGRHSCFFSVLKDGAWQPVDPVLKDPESIYK
>gi|319761608|ref|YP_004125545.1| phosphoribosyl-ATP diphosphatase [Alicycliphilus denitrificans BC]
MPSNDSLARLAAVIESRKPANGGDPQASYVARLLHKGPDAFLKKIGEEATEVVMAAKDVDHGAPAAKLVY
EVADLWFHSMVALAHYGLAPADVIAELERREGTSGIEEKALRKATGRASEEGGGQ
>gi|319761609|ref|YP_004125546.1| transmembrane protein [Alicycliphilus denitrificans BC]
MSNDIIDVEPDERAESLKAIGWVSYILHLIVAVGAVMPGAQPGVALLIVALVIDLVKKSDAEGTWQASHF
AWRIRTVLWAGVLYVVTTPLWLLFFFPGWIAWGLISIWFLYRIVRGMVSMNKGQAVDG
>gi|319761610|ref|YP_004125547.1| patatin [Alicycliphilus denitrificans BC]
MAEQAPAPPLNLALQGGGSHGAFTWGVLDALLEDGGFVLEGISGTSAGAMNAVALAHGFAQAALQHKDAA
EAHRAGCALARESLTRLWEGVGAMGSLMWGVPLQGNPLLGMMSQWLSPYQTNPLGINPLRGLLERVVDFD
ALRHAHHAHVPKVFVCATNVRTGRGEIFSGARLSADAVMASACLPLMFKAVPIGGEHYWDGGFSGNPALY
PLIYQTQCADVLLVQINPIEHRDLPDTAQEIMERMNEVTFNASLLGELRAIDFVRRLLAEGRLDPQHYKS
MRMHRIDGGSVLAAFGDASKTRADMGFVRQLFQLGRTEGERWLHRHRRDVGVQHTLHLTDNH
>gi|319761611|ref|YP_004125548.1| histidine triad (hit) protein [Alicycliphilus denitrificans BC]
MHDPNCLFCKIIAGQIPSKKVYEDEQVFAFHDIHPWAPVHFLIVPRLHLHSMAAVTPEHAGLLGHMMALA
PKLAMEQGCNPYPDGGFRIVVNTGTEGGQEIHHLHMHVIGGPRPWLRG
>gi|319761612|ref|YP_004125549.1| twin-arginine translocation protein, tata/e family subunit [Alicycliphilus denitrificans BC]
MGSFSIWHWLIVLLIVVMVFGTKKLKNIGSDLGSAVKGFKDGMKDGASGDDQQAQAGAPAGQVTNGQTAD
KTTIDVEAKQKS
>gi|319761613|ref|YP_004125550.1| twin-arginine translocation protein, tatb subunit [Alicycliphilus denitrificans BC]
MIDIGLSKMALIGAVALIVIGPEKLPRVARTVGTLLGKAQRYVADVKAEVNRSMELDELKKMKDEVESAA
RDVEQSIQTGASDLQKDMEQSLGGYGAASEAAGSSPDLSTVVPAYRHPGKNWRLKRAAVPQWYKARAGVR
TKAQSGAARVARFRPQKFH
>gi|319761614|ref|YP_004125551.1| sec-independent protein translocase, tatc subunit [Alicycliphilus denitrificans BC]
MSETQNKEDELAGTEQPFVQHLMELRDRLVKAMIAIGVVAAVLFFYPGPGQLYDLLAAPLVAHLPQGATM
IATSVISPFMVPLKILLMTAFLIALPFVLWQVWAFVAPGLYSHEKRLVLPLVISSTVLFFIGVAFCYFFV
FGQVFSFIQGFAPKSITAAPDIEAYLGFVLTMFLAFGLAFEVPIAVVVLARLGLVSVDKLKSFRGYFIVA
AFVIAAIVTPPDVVSQLALAVPMCLLYEIGIWAAQLFIRNTQAPEDTQESAS
>gi|319761615|ref|YP_004125552.1| htra2 peptidase [Alicycliphilus denitrificans BC]
MKRYWLLFSQAVTVLLAAYFVVTTLQPGWLQRGPATSGTGISLIEAPPSSGSQPAAGSFSTAARKAAPAV
VSINTSKEVRHPRSDDPWFQFFFGDQGPQAQTGLGSGVIISPDGYILTNNHVVEGADEIEVTLTDSRRAR
ATVIGTDPETDLAVLKVQLDKLPVIVLGDSDKLAVGDQVLAIGNPFGVGQTVTSGIVSALGRTHLGINTF
ENFIQTDAAINPGNSGGALVDVNGNLMGINTAIYSRSGGSMGIGFAIPVSTAKQVLEGIVRDGQVTRGWI
GVEPNELSPELAQTFGVKATEGVIITGVLQGGPAAQAGIRPGDVILKVAGKSTDNVSQLLTAVAALQPGQ
AASFELQRGDTQIKVSVVPGTRPRVQQRR
>gi|319761616|ref|YP_004125553.1| hypothetical protein Alide_0900 [Alicycliphilus denitrificans BC]
MSIQRHDLLAHFDALLQPERFKDYGPNGLQVEGRGEIARIVSGVTASRALIDAAIAARADAIFVHHGLFW
RGMDGRVTGWMKERLQRLLAHDINLFAYHLPLDAHAELGNNAQLGCVLGWQADQRFGEQELGFAAPAAFA
DAADLAAHVRAALGRSVTLVAPEGERPIRRVAWCTGGAQGFFESAIAAGADAFITGEISEPQTHLARETG
VAFIAAGHHATERYGPPAVAAHAARQLGLEHQFIDIDNPA
>gi|319761617|ref|YP_004125554.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Alicycliphilus denitrificans BC]
MNSTTNAPLPLAITQGDPAGIGPEIVAKAFRDAPQDLRGCFVVGDLATLRRAAACIERPGQASLPVALLD
SPDAWAQVPPRCLPVWQLHELAGSLAPWGQVSAEAGHAAAVCVVWAARAALRGEIAGLVTAPLHKEALAA
AGVHYPGHTELLQAEAAHHAGVPVAQMPVRMMLASDELRTVLVSIHVSLRDAIAAVTQDNVLQTLCITHA
ALSRSLGRAPRIAVAGLNPHAGEGGLFGTEEREIIAPAIAQARAQGIDARGPYAPDTVFMRARSTAGRTG
EFDVVVAMYHDQGLIPVKYLGVDKGVNVTLGLPLVRTSPDHGTAFDIAGQGVADASSLIEAVRMARRLAW
>gi|319761618|ref|YP_004125555.1| large conductance mechanosensitive channel protein [Alicycliphilus denitrificans BC]
MSLAKEFREFAIKGNVIDLAVGVIIGAAFGKIVDSVVADLIMPVVGLVFGKLDFSNLFIVLGSVPEGTAR
TLDALKKAGVPVFAYGNFITVAVNFLILAFIIFMMIKQFNRLKREAPAEPAPEAVTPEDIVLLREIRDSL
KR
>gi|319761619|ref|YP_004125556.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Alicycliphilus denitrificans BC]
MSQTPVDSSKRTWLIASSCAGAVGGVATAVPFVSAFQPSEKAKAAGAAVEVDISGLKPDEKLTVEWRGKP
VWIIRRSKEQLAELPKLDSQLADPESKRHPDEFTPAYARNEWRSIKPEILVVVGICTHLGCSPVDKFIPG
PQPSLPSDWQGGFLCPCHGSTFDMAGRVFKNKPAPDNLEVPPHMYLSDTRLLIGEDKKA
>gi|319761620|ref|YP_004125557.1| cytochrome b/b6 domain protein [Alicycliphilus denitrificans BC]
MAAYREFKEISPNASAGAKLTNWLENRFPTAFDAYKVHMSEYYAPKNFNFWYIFGSLALLVLVIQIVTGI
FLVMNYKPDAAKAFESVEYIMRDVPWGWLIRYMHSTGASAFFIVVYLHMFRGLLYGSYRKPRELVWIFGC
AIFLALMAEAFMGYLLPWGQMSYWGAQVIVNLFSAIPFVGPDLALLIRGDYVVGDATLNRFFSFHVIAVP
LVLLGLVVAHLLALHDVGSNNPDGIEIKGPGKPVDDKGHPLDGVPFHPYYTVHDIFGVSIFLFIFSAVIF
FAPEFGGYFLEYNNFIPADPLKTPNHIAPVWYFTPFYSMLRAITSEMMYALIACVVLGAGYGVLKAKLPG
FIKGGIVVGAAVVIALMLSIDAKFWGVVVMGGAVIILFFLPWLDCSPARSIRYRPGWHKWLYAIFVVWFV
VLAYLGTQAPSPVGERVSQVGTLFYFGFFLLMPWWTRLGTPKPVPDRVTFKSH
>gi|319761621|ref|YP_004125558.1| cytochrome c1 [Alicycliphilus denitrificans BC]
MKKLILTLVAALGLVAGAHASGGGMAWDKAPVNTTDTASLQNGAKLFVNYCLNCHSAAFMRFNRLKDIGL
TDQQIKDNLLFTTDKIGETMKSTIDPKQAAAWFGTNPPDLTVIARSRAGSGGTGADYLYTFLRTFYRDDT
KATGWNNLAFPNVGMPHALWQLQDDRRAIFEERESHGQTEHVFKGWERVAPGAMTDQQYDQAVGDLVNYL
QWMGEPAQNTRIRVGVWVLLFLAGFTFIAWRLNAAYWKDIK
>gi|319761622|ref|YP_004125559.1| glutathione s-transferase domain protein [Alicycliphilus denitrificans BC]
MMVLYSGTTCPFSHRCRFVLFEKGMDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYI
DERFPHPQLMPGDPVDRARVRLFLLNFEKELFVHVNTLESRATKGNEKALEKARAHIRDRLTQLAPVFLK
NKYMLGEGFSMLDVAIAPLLWRLDYYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMRK
>gi|319761623|ref|YP_004125560.1| stringent starvation protein b [Alicycliphilus denitrificans BC]
MMNAQDSPSTRPYLIRALYEWCTDNGFTPYLVVRVNDSVQVPRDYVNNGEIVLNVSYEATSGLQLGNDFI
EFKARFGGKPCDLLIPVHRVIAIYARENGQGMAFPLDEEGGEKADVAPPRPAGVVAAPPAGAERAPVQLQ
SIDGSAGEGADKDAPHPPPQTPGGGRRPSLKRIK
>gi|319761624|ref|YP_004125561.1| hypothetical protein Alide_0908 [Alicycliphilus denitrificans BC]
MNRRHYAISLHQATQESPTLARLTALTRDSSERLKAIDALIPPMLRPAIQAGPIEGDCWCLLVSSNAAAA
KVRQLLPAFQAHLRSRGWEVASIRLKIQR
>gi|319761625|ref|YP_004125562.1| preprotein translocase, seca subunit [Alicycliphilus denitrificans BC]
MATNFLTKLFGSRNDRLLKQYRKTVARINAIEPEYEKLSDEALRSKTQEFKDRIAKGESLDAILPEAFAV
VREGSKRVMKMRHFDVQLLGGMALHHGKIAEMRTGEGKTLTATLPVYLNALSGKGVHVVTVNDYLAGRDA
QWMGRLYNFLGLTVGVNLPQMPREEKQAAYGADITYGTNNEYGFDYLRDNMVYDSRERVQRGLNYAIVDE
VDSILIDEARTPLIISGQAEDHTAMYVAMNKVVPLLTRQEGEADPRTGEGVIKPGDFTVDEKTHQVFLTE
QGHENAERILVSQGLIPEGASLYDPANISLVHHLYAALRANHLYHRDQHYVVQNGEIVIVDEFTGRLMAG
RRWSEGLHQAVEAKEGVQIQAENQTLASITFQNYFRLYGKLAGMTGTADTEAYEFQEIYGLETVVIPPNR
PSRRDDQLDRVYKTTREKYEAAIADIRECHERGQPVLVGTTSIENSEIIDELLNKVGLPHQVLNAKQHAR
EADIVAQAGRPGMITIATNMAGRGTDIVLGGNVEKAVAALEADESLAPEQREAQIEALRAQWKVDHDKVT
ALGGLRIIATERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDSLMRIFAGDRVKAIMDRLKMPDGEAIE
AGIVTRSIESAQRKVEARNFDIRKQLLEYDDVANDQRKVIYQQRNEILDAPDLSALIAAMRDDCLTDVVR
QHVPAESVEEQWDLAGLEKTLASDWQVQLALQQEVQGSDAITDEEILEKVLQAAREAFEAKVAQVGAENF
TQFERMVLLQSFDTNWRDHLSALDYLRQGIHLRGYAQKQPKQEYKREAFELFRQLIDQVKNEVTRLMMTV
QLQSNAQLDEATQAMEERGEGISNVTYTSPTETGEVETLVDAQTARAKQAAVPGVRVGRNDPCPCGSGKK
YKQCHGKLA
>gi|319761626|ref|YP_004125563.1| arginine biosynthesis bifunctional protein argj [Alicycliphilus denitrificans BC]
MPVNLSAPQAADLHPVAGVRIGVAEAGVRKANRKDLTVFLLDEGTTVAGVFTQNRFCAAPVQVCREHLDG
GQAIRAMVVNTGNANAGTGSDGLARARATCEALAGQLGLAASQVLPFSTGVIMEPLPVERITAALPAALA
DAQPAHWARAAEGIMTTDTVPKAFGTQVQIGGATVSVTGISKGAGMIRPNMATMLGFLATDACIAPDLVR
DLVRDLAEQSFNRITIDGDTSTNDSFVLVATHKAAHAPITSLESSEGRALRAALLQVAQQLAQAIVRDGE
GATKFITVRVEGGRTTGECRQVAYAIAHSPLVKTAFFASDPNLGRILAAVGYAGIADLDQTLIDLYLDDV
HVAVQGGRNPQYREEDGQRVMKQQEITVRVVLGRGDAQDTVWTCDLSHDYVTINADYRS
>gi|319761627|ref|YP_004125564.1| hypothetical protein Alide_0911 [Alicycliphilus denitrificans BC]
MTDRFDQLIARAEQLISRIEAVLPRPLSAPDWSAAIAWRYRRRSGGHGVLEPVRHVAGMRLSDLKEIDAQ
KEKIQRNTQQFVDGRPANNVLLTGARGTGKSSLIKACLNSYAPQGLRLIEVDKADLTDLPDIVEVVSGRP
EKFIIYCDDLSFEEGEGGYKALKSILDGSVAASTPNVLVYATSNRRHLLPEQMKDNLSYTTAPDGEIHPG
EVVEEKISLSERFGLWVSFYPFSQDEYLAIVAQWLSALGVGSQDIEAARPQALVWALERGSRSGRVAYQF
ARDFAGRQGA
>gi|319761628|ref|YP_004125565.1| nudix hydrolase [Alicycliphilus denitrificans BC]
MTRKHTEVAVGILLRQDGALLLSTRPEGKPYAGYWEFPGGKIEAGETVEQALRRELIEELGVTIGPAEVW
KVTEHDYPHALVRLHWCKVHEWSGEFEMREGQAMLWQQWPVQVRPVLPGAYPVLQWLAEERGETFDPSAL
D
>gi|319761629|ref|YP_004125566.1| hypothetical protein Alide_0913 [Alicycliphilus denitrificans BC]
MNSPANPRTVPCPTCGGPSLYGPANPFRPFCSERCKQIDLGAWANEDFRVPAESPPEDAEYGDPKRLP
>gi|319761630|ref|YP_004125567.1| hypothetical protein Alide_0914 [Alicycliphilus denitrificans BC]
MILYEYPFNERLRTYLRLEQLFQRLGELIARTHPLDHHYALVTMFEVMDVAARADLKADVLKDLEKHKHQ
LDAYRGNPSISETVLDGVITQLDQCFAALNAQSGKAGHALTENDWLMSIRSRVGIPGGTCGFDLPAYYAW
QHHAPQARQHDLQDWAATLAPLAESVYLLLRLMRDSGLPQKVAAERGQFQQNLPQGRTFQLLRLRIDPAL
ELIPEISGNRLIVSVRLMRQEEGGKLVPSNEDAAFELTLCA
>gi|319761631|ref|YP_004125568.1| dephospho-CoA kinase [Alicycliphilus denitrificans BC]
MTTRRPIRLGVTGGIGSGKSTFAAMLQACGAALIDADGIARSVTQPDGAAIAAIRARFGPDYIDAQGALD
RARMRALVFADAGAKERLEAIVHPLVGSAIAQAAAAAGQACHRLIVFDIPLLTESGRWPRELDAVLVVDC
REDTQVARVQARSGLAEDAVRAIIATQSSRATRRAAADFVVYNDGLALSDLQTMAHRVAASFGL
>gi|319761632|ref|YP_004125569.1| prepilin peptidase [Alicycliphilus denitrificans BC]
MTGSAFADAVLVGVLGLLIGSFLNVVIHRLPRMMERQWAAECAQYAEDAGLPTQGGAAPTEQPFNLLTPR
SRCPSCGHEVRWYENIPVLSYLALRGRCSGCGTRIGVRYPLVELATAALFYACALRWGWSFTTLAWCGFC
AALVALALIDWDTTLLPDDITLPLLWAGLLASVLRWIDVQPVDAVIGAAAGYVSLWLVYWGFKLATGKEG
MGYGDFKLFAALGAWFGWQALVPIVLMASVIGALVGIAMKFASSLREGKYVPFGPFLAGGGLAAMLWGPA
RIMRAIFSTLGL
>gi|319761633|ref|YP_004125570.1| type ii secretion system f domain protein [Alicycliphilus denitrificans BC]
MATIASRDIKDFVFEWEGKDRSGKVVRGEVRASGENQVKATLRRQGVLPTKIKKRRASGGKKIKPKDIAL
FTRQMATMMKAGVPLLQSFDIVGRGNTNASVTKLLNDIRADVETGTSLNAAFRKYPMYFDSLYCNLVEAG
EAAGILEALLDRLATYMEKTEAIKSKIRSALMYPISVLVVAFVVVTVIMIFVIPAFKEVFTSFGADLPAP
TLLVMAISEFFVAYWWLIFGAIGGGFYFFMQAWKRSEKMQRTMDRFLLKMPIFGALIEKSCVARWTRTLS
TMFAAGVPLVEALDSVGGASGNSVYAVATDRIQQEVSTGTSLTAAMGNANVFPSMVLQMCAIGEESGSID
HMLGKAADFYEAEVDEMVAGLSSLMEPIIIVFLGTLIGGIVVSMYLPIFKLGQVV
>gi|319761634|ref|YP_004125571.1| type iv-a pilus assembly atpase pilb [Alicycliphilus denitrificans BC]
MASADIAQKVAQPVALPGLARALMSVGKLDQKTAEEIYKKSQTTRTSFIAELTESNAITSSDLAHTVSSI
FGAPLVDVEALDRQRLPKDLLDFKLCQAYRVVPLGKRSNRLIVATADPTNQEAAEKIKFTTQMGVDWIVA
EYHKLIQLVDATAKSGSETLDSIVNSGDFEFGDISVEEASEENSEAASNEVEDAPVVRFLHKMLLDAFNM
RASDLHFEPYEHNYRVRFRIDGELREIASPPIAIKEKLASRIKVISRLDISEKRVPQDGRMKLKVGPDRV
IDFRVSTLPTLFGEKIVIRILDPSSAKMGIDALGYEPEEKERLLQAISRPYGMILVTGPTGSGKTVSLYT
CLNLLNKPGVNIATAEDPSEINLPGVNQVNVNEKAGLTFATALKAFLRQDPDIIMVGEIRDLETADISIK
AAQTGHLVLSTLHTNDAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCPQCKAPADIPHETLLEAGY
KEEEIDGSWVTYRPVGCSACNNGYKGRVGIYQVMPVSEETQRIILRDGSALDIAKQARQEGVRSLRESGL
HKAKMGLTSLEEVLAVTNE
>gi|319761635|ref|YP_004125572.1| hypothetical protein Alide_0919 [Alicycliphilus denitrificans BC]
MNKTILSTTGTPLNQQDNGTRGGYIALGMVGNKFAVFSLLNKQVQILGSSDLKEMNLKALFGALWCEQHY
NEFDAKKEEVVFNHKRLATDILSACQAAGTYSETAERRVGVWKMNDGQLVVNGRQLWRADGTVLEHGIHE
GQVYPVSGDVGFDLSTPMATREEVNKVLAAFNSPQWIHPMAGELVLGFLGMSLVSAALSRRPHVLMTGPA
ACGKSTVLGYVRLMLGRLAHPCSGPQNLAGLYQSIGGTSKAVINDEFEADSRSKSCKETFEIARMSYSMQ
EEDKGIVRGTSSGNSRSYRFCSPFIAAGISPGKMEPADLTRWVTLEAERTPQGERLSDAEARELGPKLAR
LYLSRWNVFQASEDVVRDCILSLGGDGRMADTIGTLLASYWAFVSETPATEEDAKFLVNMLGIEERIAVH
QVSDELQCLEALTSRVVPFKVVAGAALVTRHLSIAQAIEMVCADPTGQPELVMRLAQMGLRVAFAKGKWS
LYVVNSPMHQELRKLFAGTKWATGGWSVVLRRLPGGEESTQRIGAGLGAAKVTVVDVPEHLLSAGNEDNM
LLAA
>gi|319761636|ref|YP_004125573.1| hypothetical protein Alide_0920 [Alicycliphilus denitrificans BC]
MRPEHSPLASSTSASAPSLFEQECEAVGRASAAANLRFDKSGPETYQRAFRKYKGPVARQDYFVRKCLGL
RLNAIKRGMLVDPSVTPDHLRYITDGICPVTLEPLEFETRGQSKLNPSVDRLVNDVGYRAGNICILSQRA
NRAKGEKSFEEVASIATQGEPAGGLEPVEWMRLCSLMYGAWDKAYQRGDPHLLPLAAIPGPGMFMSTSQV
VQLMLTRLAQGLLPADRAHTMWRDLTVAAVAQVHLYDEMMALLKVAISEEEHPGNAWLHGDVFTAFEHWY
NASHRTLVPHVESMLQARTQQRDDPVAKELWPVGGRYHH
>gi|319761637|ref|YP_004125574.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MKAYIDRHRDDYGVEPICRALQMAPSCYWRHAARQRNAQLRSARAQRDEGLKADIQRVWHANWQVYGADK
VWLQMNREGIVVARCTVERLMRAMGLQGARRGRAVRTTTPDTSAPCPLDHVNRHFHASRPNELWVSDFTY
VSTWQGWLYVAFVVDVYARRIVGWRVSRSMQTDFVLDALEQALYDRQPAAHALTHHSDRGSQYVSIRYTE
RLDQAGIQPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGI
PPAEAEANYWRQLAASDTSTKVST
>gi|319761638|ref|YP_004125575.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319761639|ref|YP_004125576.1| hypothetical protein Alide_0923 [Alicycliphilus denitrificans BC]
MPNCQEFRLVTRADVAQMFGVCVKTVDNYIKEGLLPQPVQFASREYWHPDDMRSFIDATFKRSSPAPLPN
AAAQSTDAQMAPQASATRHDAQPNPPSPKSRDSHPTVRAKTRGHALLQRLNSTT
>gi|319761640|ref|YP_004125577.1| integrase family protein [Alicycliphilus denitrificans BC]
MAHIANRSRFRVTVKNKPDLTQHFSFSKVAAVEAYMKELRAQGYKPRAEQLDESWLVRIRERGHKPLEAT
FESEAAATQFIEKTSEERKRGLFIDYTAALKVTFADILVRYLLEETSRKKSGEVLAYVLEGWLEDSGPRG
IELLAQYREELRARGRKVRQPKFKMRQPSTELAWIHKRLAEVTTVDIEGFIDERLEVVAKGTVDREIDRL
KAIFKVALKVWDYNLAKNPMDAVRRPDFFNERDRRISADEERRLLEALAQLDLERAVQPVLRELADQEMS
NMQFTSPSARKKVLVEVRNRLRAQAEEEAHVEPYLQAFYLFQVMTGARRGETVNLTWDRIDFEAKTAYLP
ETKNGRARKLALRQDLIDILAELPKNTAFVFDVGLDHIVGAWDKACSMAGIQDLRIHDCRHEALSRLAET
GKFSIPELQVFSGHRDIRMLMRYAHLCASRLAAKLDECFKDDAKIRVHRGRRFLNKHADVKVKDLLDASS
DRETVVADTLPCTEAQEAVIEEAPSPASNVIVFRPRLRA
>gi|319761641|ref|YP_004125578.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
MDPQPPWGASYNCRFTSPPPITLAANSPSTAATLALIADDMREVDKVIAARLQSSVPLVGSVAQYIISAG
GKRLRPALLLLTCGALEYKGEQRFNLAAVVEFIHTATLLHDDVVDESTLRRGRPTANEAFGNPASVLVGD
FLHTRSFQMMVEAGSMRILQVLADATNVIAEGEVQQLMNTHDASLDEAGYLHVIRSKTAKLFEASARLAA
ILAGSTPDIEQACADYGQALGTAFQVIDDVLDYDGDAQEMGKNLGDDLREGKVTLPLIIAMQRGSQAQRE
LLRNVIETGSADELQPVIAIIRETGALTATRDAAAAQARLAMDAAAKLPANPYTKGLLQLAAQLLERRT
>gi|319761642|ref|YP_004125579.1| ribosomal protein l21 [Alicycliphilus denitrificans BC]
MYAVIKTGGKQYRVAAGEKIKVEQIAAEVGQEIVIDQVLAVGNGAELKVGTPLVSGATVKATVVAHGKHD
KVRIFKLRRRKHYQKRQGHRQQFTELQIQAIAA
>gi|319761643|ref|YP_004125580.1| ribosomal protein l27 [Alicycliphilus denitrificans BC]
MAQKKGGGSTRNGRDSKPKMLGVKAYGGELISAGSIIVRQRGTRIHPGVNVGVGKDHTLFALVDGHVSFG
TKGALSKHTVSVTPA
>gi|319761644|ref|YP_004125581.1| gtp-binding protein obg/cgta [Alicycliphilus denitrificans BC]
MKFVDEAFIDVAAGDGGNGCVSFRHEKYKEFGGPNGGDGGRGGHVFAVADPNLNTLVDFRYSRRHEAKRG
EHGMGSDMFGAAGSDITLKMPVGTIISDANTGELLYELLTPGEVVTIAKGGDGGFGNLRFKSAINRAPRQ
KTPGWPGERKSLKLELKVLADVGLLGMPNAGKSTFIAAVSNARPKIADYPFTTLHPNLGVVRVGPEQSFV
VADIPGLIEGASEGAGLGHQFLRHLQRTRLLLHVVDMAPFDESVDPVAQAKAIVAELKKYDTQLYEKPRW
LVLNKLDMVPAEERAARVKDFVKRFKWKGPVFEISALTREGCEPLVKAIYQHVRAQQQAAQAPAEVDPRF
AEGNPPA
>gi|319761645|ref|YP_004125582.1| glutamate 5-kinase [Alicycliphilus denitrificans BC]
MVSSVLRDARRIVVKVGSSLVTNEGRGLDEVAIGEWSRQLAALVRGEGGEPREVIMVSSGAIAEGMKRLG
WSARPSEIHELQAAAAVGQMGLAQMYETKLREQAMRSAQVLLTHADLADRERYLNARSTLLTLLRLGVVP
VINENDTVVTDEIKFGDNDTLGALVANLVEADVLVILTDQKGLYTADPRRDPGAQFVHEAQAGDPALEVM
AGGAGSSIGKGGMITKIVAARRAAGSGASTVIAWGREPDVLLRLAQGEPIGTLLVAQTQKKQARKQWMVD
HLQLRGSVTVDAGAAAKLRDEGKSLLPIGMVAVEGDFVRGDVIAVRDAGGTEIARGLANYASAEARLLCR
RPSSEFERLLGYAAEPEMVHRDNMVVSGN
>gi|319761646|ref|YP_004125583.1| nudix hydrolase [Alicycliphilus denitrificans BC]
MLDRDGFRPNVGIILLNQRNQVFWGKRIRTHSWQFPQGGIDRGENPEQAMFRELHEEVGLQPNQVRVIAR
TRDWLRYEVPDRYIRRDARGHYRGQKQIWYLLQLLGHDWDLNLRATDHPEFDAWRWNDYWVPLDVVVEFK
RGVYEMALTELARFLPRYDQRNRYLRSGMRARDPEGGGQAPMQRAGSLLVKPGMELPPGASFDPDPQGGM
PAPLADAPHGSPRK
>gi|319761647|ref|YP_004125584.1| prolyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MKASQFFISTLKEAPADAEVVSHKLMMRAGLIKKLGAGIYSYMPMGLRVIRKVEAIVREEMNRAGAVECT
MPVVQPAELWQETGRFEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQELRSYKQLPRNLYQIQTKFR
DERRPRFGLMRGREFIMKDAYSFDRDQAGAKASYQAMAQAYRRIFDRFGLRYRAVAADSGAIGGDLSEEF
QVIAATGEDAIVYCPASDYAANMEKAEALAPAGPRPAAAAPMTRTPTPGKATCAEVAELLGVPLQTTVKS
LVLATDETNEAGEIVKSQVWLLLLRGDHDMNEIKVSKVPGLDKGFRFATVTEIEAHFGAKPGYLGPIGLR
KPVQVVADREVALMADWICGANEEDFHITGVNWGRDLPEPDAVADLRNVVAGDPSPDGKGVLAIERGIEV
GHVFYLGTKYSKAMNATFLGEDGKPAFFEMGCYGIGITRLPAAAIEQNHDERGIIWPDAIAPFTVVICPI
GMDRSEEVRAVAEKLHGELLASGIDVILDDRGERPGAMFADWELIGVPHRITIGDKGLKEGQVEYLHRRD
AGATKVGVAEILAHVKERVAA
>gi|319761648|ref|YP_004125585.1| lytic transglycosylase catalytic [Alicycliphilus denitrificans BC]
MTAGVRRRACLAALAGGPAAWLGLPAAAHAGGQLEEPLVDSVRTALSSAVADLAPPEPLFVTTEARLVYL
RWLGAMSDRLRRSKPDWEVRRDFLQTVWYESKRAGLDVSLVLGLIQVESAFRKFAVSPVGARGYMQVMPF
WSRTIGDGDAGKLFHMQTNLRFGCVILRHYLDRERGDLYMALGRYNGSRGKAPYPNAVFAAQRRWLFQDR
SAEA
>gi|319761649|ref|YP_004125586.1| hypothetical protein Alide_0933 [Alicycliphilus denitrificans BC]
MTLTESLFIIGLLIAASAFFSVAEISLAASRRLRLRQMADEGDARAARVLHVQEQPGDYFTVVQVGLNAV
AILGGIVGEGTLSPYFGALFGLWLPEGRAQALGFLASFLAVTSLFILFADLCPKRLGMANPERLAVRVIG
PMQLCMTLFKPVIWLYSRTADMLLALSGLPVQRDERVTSDDILAMMEAGARAGVLAAQEQQVIANVFELD
SRSVTSAMTLRERIAFFRRDDPDELIRARIAAEPFSTYPVCDGDIDHVVGYVDAKDLFQRALKNQPISLA
EEGLVRKVLIVPDRLSLAEVLAHFRQVHEDFAVIVNEYSRVVGVVTLNDVMSTVMGDLVGPADEEQIVRR
DENSWLIDGTTPIEDVLHALGIDELPHAGDYETLAGFLMVMLRRVPRRTDSVSVGGYLFEVLDVDSYRID
QVMVSRLGRAAQAGEEAQASAERS
>gi|319761650|ref|YP_004125587.1| aaa atpase central domain protein [Alicycliphilus denitrificans BC]
MTSHSLVPQTSGLSLPVAQMRSVFHPGDVERKLARLQEAGSQREYENLRVVYERMLERGPERFQVKPSGV
PDMVPLYEHLPNFTDVLDDVKRHVALAQDSRDGLEVTPMLLLGPPGIGKTHFARQLAELLGTGMSLVPMS
SMTAGWLLSGASSQWKGARPGKVFEALVEGEYANPVIVVDEIDKAAGDAQYDPLGALYGLLEHDTAQSFT
DEFAEVAIDASQVIWITTANDERGIPEPILNRMNVFQVQAPTPSQARAIALNLYHGIRAGHDWGRLVDPE
PQPAVLDLLAQMPPREMRRALMTGFGNARLARRSTVEADDLPRAAGAKGRIGFMQ
>gi|319761651|ref|YP_004125588.1| glutaredoxin-like protein [Alicycliphilus denitrificans BC]
MSDVQQRIDQLVKSNDILLFMKGNASFPMCGFSGRAVQILKACGVDPKDIAAVNVLEDDEIRQGIKDYSN
WPTIPQLYVKGEFIGGSDIMMEMYESGELQQVLGTQQQAG
>gi|319761652|ref|YP_004125589.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Alicycliphilus denitrificans BC]
MNEIATIAQALARAQARGLARIDAQMLLLHALGRPTGDRAWLLAHDTDPLDAPALARYQALCARRAAGEP
VAYLTGSKEFYGLPLRVDARVLDPRPDTEILVDWALELLAPLPAPRVADLGTGSGAIALALQHARPDARV
LAMDASAGALAVARANAERLGLPVRFVQADWLAGIAGPFDAIVSNPPYIPAQDPHLAALAHEPLSALASG
ADGLDDIRAIAAQAPALLAPGGWLLLEHGWDQAGAVQALLRASGLARVQSRDDLAGIARCTGGSMPAAGR
Q
>gi|319761653|ref|YP_004125590.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC]
MKPFLRSQLERYAQRLSELDFLLSREDIMADMQQYRAISREHADVTAVAGRYARYRQREADLEGAREMLE
DPDMAEMAQEEIAAAEAELAQLEDELQRMLLPKDPDDERNAFVEIRAGTGGDESALFAGDLARMYTRYAA
TQGWKVEVMSANESELGGYKEVVLRIEGDHAYGRLRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPD
EAQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHANKAKALQVLQARIQE
KERSERAAKEAALRKGLIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLAVMEGDLGEVLQALQHAREA
ELLAELETAV
>gi|319761654|ref|YP_004125591.1| glutamyl-tRNA reductase [Alicycliphilus denitrificans BC]
MAVWALGINHHTAPLDLRGRFAFALDQIAPTLHGLRQSLAQGAGRHPDVETAIISTCNRTEIYCAAEAPA
LDHTLDWLASSGGVSPSLLRSHSYTLESGLVARHAFRVASGLDSMVLGEAQILGQMKDAVRAAKGAGALG
TTLNQLFQRSFAVAKEVRTSTDIGAHSISMAAAAVRLAGQLFEDLSKIRVLFVGAGEMIELCATHFAARN
PKQIAIANRTLERGEKLATRFGGEVMRLADLPDHLHEFDAVVSCTASTLPIIGLGAVERALKKRRHRPIF
MVDLAVPRDIEPEVKQLEDVYLYTVDDLASVVQTAQAHRQAAVAQAEAIIDAGVQSFMHWMELRTPAAGP
SGGVVPLIRQLNTQTDEWRALEIARAKKLLAKGEDIDTVLEALSRGLTQKMLHGTMAELRAGDAETRAQT
AQTVSRLFLRSSSRNGL
>gi|319761655|ref|YP_004125592.1| hypothetical protein Alide_0939 [Alicycliphilus denitrificans BC]
MSPLAAINHLLNFAAPALAVAVLLASFAHVFMRKMAKTHGWLAPIAINFIVGCAVLAAGLVLLGRDGRML
TYAALVLACATSQWLLLRAWR
>gi|319761656|ref|YP_004125593.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MRMHSPSLPELHAFAAAARLGSFSRAAGELHVTQGAISRAIARLEEHLGVALFEREGRRSVLTRAGADYL
DAVGPSITAIESATLAVRTRRSPRQLRLSVPPTLFSHWLIPRLPDFSARHPGIGLSFAPYRRDDPLSAPD
IDAWIRIGQADWPAGITAEYLVGRELVPLCRPADLPQLRTPADLLARPLLFHTNYPGNWAHWFANVGCTH
GPLVPAADFDQVSLLVQAVIAGMGVAVVQRALVEPELAAGRIAVAIALEPPVLLDRGYHLCRPAGRAPSP
ALENLRAWLLEQAAACA
>gi|319761657|ref|YP_004125594.1| hypothetical protein Alide_0941 [Alicycliphilus denitrificans BC]
MALRRTLLSTLAACAAAAFAPLALAQADDYPNRPVKLIVPFAPGGSTDMVARLLADKLSSVLGKAVVVDN
KGGAGGSIGADAIAKAAPDGYTIGMATVSTHGANPALYAKLPYDAVKDFAPITNVMSVPSVFVVHPGVPA
RTMREFVALAKAQPGKYTFASPGTGSLGHANIENFMHLAGIELLHIPYKGAGQAMTDALAGQVNAMTDNL
PSTLPNIQSGKLRPLAVLALKRSPVLPDVPTYAELGYPGMGDGGWFGLVAPAGTPREIVARLNAAAHKAM
AMPDYVEKQKSISGESMANTPEQFARQIQAAIERYTAVAKRAHIRLD
>gi|319761658|ref|YP_004125595.1| n-formylglutamate amidohydrolase [Alicycliphilus denitrificans BC]
MDDDLRPRPDTPVEVWHPTAAPLPLVCDSPHSGTAYPEDFGHAVPMQLLRRGEDTHVHRLWRSAPAHGAT
LIAATFPRTYIDVNRAETDLDPAQIDGEWPVPLAPGPKTRQGLGLVWQQIVKDGVPTPLYARRRTVAEVQ
RRIERYWRPYHAQLAQAIDASVRRFGGVWHLNLHSMPNDVYKRLGRVDAPQLADFVLGDRDGTTCAPEFV
HLIADTLKGFGYSVAVNEPYKGVELIGRIGQPQLNRHSLQIEIRRPVYMDEDTRASHAGFAPLQQHLDLL
LGVVAQYVRGRLAGSEQNWP
>gi|319761659|ref|YP_004125596.1| mscs mechanosensitive ion channel [Alicycliphilus denitrificans BC]
MRLPDNARMQRHRFLPWLFLLCLAASLSLWPAQAENRTAATAAAEQSADEPPLPPVDELRRQLDALPQKI
GEQDDGRKLLAEVNAIGAAAERLAARRTADLADVDLRLSGLGPAPEKGSPADTPDVAEQRAALNKQRTAI
DAELKLARLVAVDAAQRGTDLIRQRRAQFQAQLTTRTDSPLGITFWRNLRNSAPTDGARLRALAGELRDA
AATAAQPPHRAAFAGYLALALLLAVAGTWAAEHILMRVLPPRLPAARLRRSLLAASAIAANVLIISAALQ
FVWSGVALGGPLPENLRALQQATLRAAAYAAFTITLGHALLSPRRSSWRLLPISDGLARRLARFPWWMGL
LSALGVLVADVNDIVGASLAAEVLVHAAFALLVSATMAMALGRMRVGEAQPDAPPQPLWVGLLLAGAGIA
VATAVLAVALGFVALAGTLARQMAWSSVVFASIYLLAHLTDDLCDAILSSRGGFGARIHATLGIDAPLLD
QAAVLISGVLRVALFFYMLIALMAPFGTGPDELFRRGTNVDHSLRIGDLALAPQALFTALAVICGGFLAI
RMSKRWLTERYFPHTTLEPGMRSSIVTLLGYVGGVLVIAVALAGLGISVERIAWVASALSVGIGFGLQAI
VQNFISGLILLAERPVKVGDWVVLGDTEGDVRRVNVRATEIQLGDRSTVIVPNSEFITKTVRNVTAGSAQ
GRVLLRLPAPLDTDARRMRELILQAFQAHQAVLEAPAPSVTLEGIQSGTLTFLAIGYVGSPRDVGGVRSD
LLFSILDALREAGLALSPPATTSVAQREPPPEPPPLSERT
>gi|319761660|ref|YP_004125597.1| glycerophosphoryl diester phosphodiesterase [Alicycliphilus denitrificans BC]
MSTLASTTWPYPRWIAHRGAGRLAPENTLAAFRLGAQHGYRMFECDAKLSGDGVVFLMHDATLERTTSGH
GIGGERPWSDLAQLDAGGWHSRQYAGEPLPTLANVAHWCIANGCHLNIEIKPTPGTELETGRAVAQLAAR
LWQGRDVPPLLTSFKPQALAAAREAAPDLPRGLLLDQLRAGWLDEARTLGCLAVVCNHALWSAATVAEVH
GAGLRALSYTVNDEWAAERLIALRTDGIITDRVDLFPPA
>gi|319761661|ref|YP_004125598.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MASISLKNIVKRYGSGKSAVPVIHGVNAEIKDGEFIVLVGPSGCGKSTLLRMIAGLEEITGGELFIGDRL
VNGLEPARRNIAMVFQNYALYPHMTNFENMAYGLKLAKVPKDEIRRRVDKAAKILELSHLLERKPRELSG
GQRQRVAMGRAIVREPQVFLFDEPLSNLDAKLRGQTRIEIQKLHTELGITSLFVTHDQVEAMTLAQRMIV
MNAGNVEQFGTPEEVYHEPATTFVASFIGSPPMNLLKQAPGGQPGRILGIRPEHIDLVESGGWEFKVETL
ELLGAERLLYGKVGDEDLTVRTEEDKPYPKPGETTRIAPRRDRVHWFSLETGKRV
>gi|319761662|ref|YP_004125599.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MVDRNPWLTFLSHAVLVLGVSIVAFPLYLALVASTHTAEAIVQSPMPLLPGSHLWENYRNALLGSGKLGS
TTNVVHMMWVSFVVAITITLGKIAISLLSAFAIVYFRFPFKMLCFWAIFLTLMLPVEVRILPTYKVVADL
GLLNSYAGLSLPLIASATATFLFRQFFLTVPDELVEAARIDGAGPMRFFKDILVPLSRTSIAALFVIQFI
YGWNQYLWPLLMTTSEDMYPVVIGIKRMLAGGEAAVDWNIVMATAILAMLPPTLVVILMQKWFVKGLVDT
EK
>gi|319761663|ref|YP_004125600.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MEKRVLFRSAWLPWVLIAPQLAIIGVFFFWPAGQAVLQSFQMEDAFGMSREWVGLDNFRQLLTNPDYLGA
FQRTALFSVLVAGTGIVVSLALAIYADRIVRFAMVYKTLLIVPYAVAPVIAGVLWVFLFSPSIGVVTHYL
GRLGYQWNHLMNENQAMTLIVLASVWKQISYNFLFFLAGLQSIPRALIEAASIDGAGPWRRFWNIQLPLL
SPTSFFLLVINIVYAFFDTFGIIDAATQGGPGQSTSILVYKVYLDGFKALDLGGSAAQSVILMCIVVVLT
VIQFRYVEKKVQY
>gi|319761664|ref|YP_004125601.1| extracellular solute-binding protein family 1 [Alicycliphilus denitrificans BC]
MQFKQLGLAACMFATGLAAQAQTEIQWWHSMTAVNNEWVNDLAKQFNESQKDYKVTPIFKGSYDESMTAA
IAAFRSGNQPHILQVFEVGTATMMASRGASVPVAKVMKDAGADFNPAAYIPAVAAYYTAPDGQILSLPFN
SSTTVAYYNKDAFKKAGLDPDKLPTTWPEVFEAAKKLKASGHSCPMTLAWQGWTQLESFSAWHNVEFATH
KNGLAADGYKARLKINSPLHVRHIDNLAQAAKNGEFVYKGRGSTAQASFTAGECAMIQTSSGFYGDVAKN
AKFAYGIAPLPYYPDVKGAPQNTVIGGASLWVMSGKKPEEYKGVAKFFEFLSQTKVQAASHQRTGYLPIT
MAAFDLTDKSGFYQKHPGTDVAVNQMIRKVTDNSRGIRLGNYVQVRAIEDEELEQVWAGKKSGKQALDAI
VTRGNELLTRFERSYKK
>gi|319761665|ref|YP_004125602.1| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MPKTSLDKSKIKFLLLEGVHPSAVQVLRAAGYTQVEVLPGALEGEELRRKIADVHFLGIRSRTQLTADVF
AHAHKLVAVGCFCIGTNQVDLDAARERGIAVFNAPYSNTRSVAELVLAEAILLLRGVPEKNAAAHRGGWL
KSATNAYEIRGKTLGIVGYGSIGTQLSVLAESLGMQVIFHDVVAKLPLGNARQAPGLQELLAQSDIVSLH
VPELPSTQWMIGADQIAAMKPGGILINASRGTVVEIEPLAQAIRDKKLLGAAVDVFPVEPKSNKDEFVSP
LRGLDNVILTPHIGGSTMEAQANIGLEVAEKLVRYSDNGTSTSSVNFPEVALPAHPGKHRLLHIHRNVPG
VLSQINSILSDNQINIAGQYLQTNEAVGYVVIDLDARSSDLALEKLAQVPGTIRSRVLF
>gi|319761666|ref|YP_004125603.1| fad linked oxidase domain protein [Alicycliphilus denitrificans BC]
MNAPIALAALQAQGSEPVRLREIPYNYTSFSDREIVIRLLGAQAWDVLDHLRRERRTGRSARMLYEVLGD
IWAVQRNPYLQDDLIHNPQRRKMLVDAMRHRMGEIEKRRTPQEDPERDRRVAQLVEAANRAIAEFDATLV
EVAGMRKLVARRLARHTAKDNIKFDGLSRVSHVTDATDWRVEFPFVVLTPDTEGETAALVKECIELDLTI
IPRGGGTGYTGGAIPLSWRSAVINTEKLEAMTEVEMVRLPGLAHDVPTVWTEAGVVTQRVADAAERGGYV
FAVDPTSIEASCIGGNIAMNAGGKKAVLWGTALDNLASWRMVTPQAQWLEVTRINHNLGKIHDAEVASFE
LAYFEADGRTPVRTERLDIPGKSFRKEGLGKDVTDKFLSGLPGVQKEGTDGLITSARWIVHRMPAHTRTV
CLEFFGSAKEAVPSIVEIKDFMFAEQKRSGVLLAGLEHLDDRYLKAVGYATKSKKGGGRLPKMVLIGDLV
GDDADAVARATAEVVRIANSRSGEGFTAVSSEARKQFWLDRKRTAAISRHTNAFKINEDVVIPLPRMAEY
TDGIERINIELSLRNKLKLCDALQDFFARPDLPCAKQGDALPDAELLGDRVAQAQALVAEVRALWQGWLD
DVARLFPQLQDHSLRASWKTQLRQPLAEIFVGAAFEPLMQEAAAIHKQVLKGRVWVALHMHAGDGNVHTN
IPVNSDDYEMLQTAHEAVGRIMQLARSLDGVISGEHGIGITKLEFLSDEELAPFADYKRRIDPQGHFNRG
KLLRNQELQGQVYQALEANSAHNGPRRSLPFADLTNAYTPSFGLMGYESLIMQQSDIGQIVASVKDCLRC
GKCKPVCSTHVPRANLLYSPRNKILATSLLAEAFLYEEQTRRGISSHHWQEFEDVADHCTICHRCYNPCP
VKIDFGDVTMAMRSLLVKMNKKSWRPGNKLAMAMLNATDPRTINLLRAGMVNVGFKAQRLAVDALRSVSK
AQTARPPATVGTAPIKEQVIHFVNKKLPGGLPTRTARALLDIENKDYVPIIRDPQTSADSEAVFYFPGCG
SERLFSQVGLATQAMLWHAGVQTVLPPGYLCCGYPQRGNGLQDKAEKMITDNRVLFHRVANTLNYLDIKT
VVVSCGTCYDQLQGYEFDKIFPGSRIIDIHEYLLEKGITLPAGQGGYLYHEPCHNPMKLGDSMKTVRALV
GDKVLKSDRCCGESGTLGVSRPDVSTQVRFRKTEEIRKGEAQLRGSGAVGATDNIKILTSCPSCLQGISR
YQDDLQTGLLEADYIVIEMARQILGENWLPEYVQRANAGGIERVLV
>gi|319761667|ref|YP_004125604.1| histidine triad (hit) protein [Alicycliphilus denitrificans BC]
MTTAPACPLCDADGGALIWRGAQLRVIRAEEAGFPAFYRVIWNAHAAEFSDLTPAERRHCMEAVAIVEQA
LREQLSPAKINLATLGNVVPHLHWHVIARYEWDSHFPAPVWAPPQRASDGAHEAAVVDRLPALHGLIRER
LDRWAAQAGA
>gi|319761668|ref|YP_004125605.1| hypothetical protein Alide_0952 [Alicycliphilus denitrificans BC]
MAGLTTGAPTPQSITVHEQSRVLEVVFSDGAHFRIPFELMRVYSPSAEVQGHGPGQQVLQTGKRDVTITA
LAPVGNYAVQPSFSDGHDSGIFSWNYLYELGRDAQALWADYLDRLAAAGLDRDAPMAPKARGGHGCGGH
>gi|319761669|ref|YP_004125606.1| ubiquinone/menaquinone biosynthesis methyltransferase [Alicycliphilus denitrificans BC]
MSTTHFGFQSVREEDKARHVRGVFDSVAPKYDLMNDLMSAGLHRAWKAYTVMVANLREGDQVLDIAGGTG
DLSLAFSRKVGTTGRVVHTDINEAMLRVGRDRLIDKGVMLPTLVCDAEHLPFPDNHFDLVSVAFGLRNMT
HKDAALREMCRVLKARGRLLVLEFSKVAKPLERAYDWYSFQVLPRLGKLVAGDDSSYRYLAESIRMHPGQ
EELKSLMQQSGFGHVDYHNMTGGIVALHVGIKC
>gi|319761670|ref|YP_004125607.1| import inner membrane translocase subunit tim44 [Alicycliphilus denitrificans BC]
MKLWSVLLVAMLALVHLDADARRLGGGKSMGRQSSNVTQREAGNPPAAPAAPVQNAANSAPAKPAAAPNA
AAAAPKKPWGAMLGGLAAGLGLAWLAHSLGLGAEFGQFLLIALLALAVMVVIGMVMRSRRPAASQEGAAP
FAFQGAGAATPAEAQAPRQYSPDKVGNDASARPWESTGMAYQAPATGGGSMIGSALAGSQNWGVPADFDV
AGFLAAAKRNFTTLQAAWDRSDIATLRSMMTDGMVDEIRAQLSERESHRGGEQPNHTDVVMLEAQLLGIE
DLGDGYMASVEFSGMIREEPSAGPSPFREVWNMTKPKNGSVGWLVAGVQALQ
>gi|319761671|ref|YP_004125608.1| hypothetical protein Alide_0955 [Alicycliphilus denitrificans BC]
MATQSPFSFLDGFFERIAAGPQPPAWLVHELQHRLVLFLNHVLMQEREAMERLARQRGRVARVQWRVYSM
ALQVTPAGLLDLAPQGALPDLRLEVSETSPLSLAKGALRGDKPTIRIEGDVQLAGEINWLVDHVRWDVEE
DLARVIGDAPARAVAGMAGRVAGALRRFVGGRMASGLDGTSDRPTS
>gi|319761672|ref|YP_004125609.1| 2-polyprenylphenol 6-hydroxylase [Alicycliphilus denitrificans BC]
MSRFFRGLTIVWVVLRYGLDELVLSSFNRPWLRVFTRVITLGRNLDAPRGQRLREALERLGPIFVKFGQV
LSTRRDLMPPDIADELALLQDRVPPFDPGIAIATIERSFRRPIGEIFVSFEREPVASASIAQVHFAVIRD
RQGIERDVAVKVLRPGMLPVIDKDLALMRMMAGWVEGLSADGKRLKPREVVAEFDNYLHDELDLVREAAN
AAQLRRNMEGLDLVLIPEVFWDFCHADVAVMERMNGVPINQVERLRAAGVDIPKLARDGVTIFFTQVFRD
GFFHADMHPGNIQVSLDQSTFGRYISLDFGIVGTLTEFDKEYLAQNFTAFFRRDYKRVAELHIESGWVPA
STRVNELEAAIRTVCEPYFDRPLKEISLGMVLLRLFQTSRRFQVEIQPQLVLLQKTLLNIEGLGRQLDPD
LDLWSTAKPFLEKWMLEQLGPQRMWRELRAEAPHYAKILPDLPRLLHDFLRQRPHDGRADLQELLAAQKR
TNRLLQSLLYGGLGFVLGLLAMQLFVRIRFF
>gi|319761673|ref|YP_004125610.1| na+/solute symporter [Alicycliphilus denitrificans BC]
MLLFMVIAYLFVTIGIGLWAAQRVKNTADFAIAGRHLPMYMIITTTFATWFGSEIVLGVPAKFIQGGLNA
VVEDPFGAGMCLILVGLFFAAKLYRMTLLTISDYYRERYGRAVEVICSLIIMLSYLGWVSAQVTALGLVF
NLLSGGTVSIPWGMAIGVLSILVYTLWGGMWSVAVTDFIQMIILVLGLVVLSWFAADMAGGAGKVIDLVT
SRDMLRFWPEPTWHEVLFFFGAAITMMLGSIPQQDVFQRVMSANTERAATHGTVIGGSAYILFAFVPMFL
VASALLIMPEQAAQLLREDPQKVLPTLVMERMPLLMQVLFFGALLSAIKSCASATLLAPSVTFTENIWRQ
FRPEYISDREKLLAMRISVLVFAAGVLFYSIKMEGTPIYELVSSAYQVPLVGAFVPLVFGLYWKRANTQG
AVCAVVMGIGVWLVFMLTPALHEAFPQQLAGLLSAVFGMVAGSLTPQLVRNTRAPHHRVVGVE
>gi|319761674|ref|YP_004125611.1| regulatory protein, fmdb family [Alicycliphilus denitrificans BC]
MPIYAYRCGTCGHAKDVLQKISDAPLTVCPACGAQAFAKQVTAAGFQLKGSGWYVTDFRGGANGAASAPV
AQDAPKTEAASAAPASPASSSDA
>gi|319761675|ref|YP_004125612.1| hypothetical protein Alide_0959 [Alicycliphilus denitrificans BC]
MAALRKWLFTGLLVIVPGVITAWVLSWIVSTLDQTLQILPGAWHPDRLLGFHIPGFGVLLTLAILLVVGA
FASNFAGRKMVSWGDALVSRIPVVRSIYSSVKQVSDTLFSESGNAFRTAVLVQWPRDGVWTVAFVTGSPS
GEVAAYLRDEFVSVYVPTTPNPTSGYFVLMRRSDCIELDMSIDAALKYIVSMGVVAPPDLVAHEPGK
>gi|319761676|ref|YP_004125613.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MAMRSHYCGLVTEALMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRPEMFKVAEDIRNEFC
VRVQGVVRARPAGTTNDKLKSGQIEVLCHELDVLNPSVTPPFQMDDDNLSETTRLTHRVMDLRRPAMQRN
LMLRYKTAIQVRNFLDKEGFVDIETPMLGKSTPEGARDYLVPSRVHDGQFFALPQSPQLYKQMLMVAGYD
RYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEEEIRAIFQRMIVEVFKQQLDVDLGEFPTMAYAEAMH
RFGSDKPDLRVKLEFTELTDVMRDVDFKVFSTPATTKGGRVVALRVPGGAAISRGEIDQYTEFVKIYGAK
GLAWIKVNEAAKGRDGLQSPIVKNIHDAAIAEILKRTGAQDGDLVFFGADKEKIVNDSIGALRLKVGHSE
FGRQNGLFENRWAPLWVVDFPMFEHDEDEDRWVAVHHPFTSPKDGHEDLMDTDPGKCIAKAYDMVLNGWE
LGGGSVRIHRADVQSKVFSALKIGPEDARAKFGYLLDALQYGAPPHGGLAFGLDRLITLMTGAESIRDVI
AFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRNPVPAAG
>gi|319761677|ref|YP_004125614.1| nudix hydrolase [Alicycliphilus denitrificans BC]
MYKIPESVLVVIHTPDLQVLLIRRADAAEDFWQSVTGSKDSLAEDFAATAAREVREETGIDAAAPGCVLR
DWGLENVYAIYPQWRHRYASGVYLNTERVFGLCVPPGTPVALNPREHTSYAWMGWREAADRCFSPSNAEA
ILWLPRFV
>gi|319761678|ref|YP_004125615.1| endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans BC]
MSPIELPAEHSGILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRKMNHKEAAYFKRW
PRVPQAEYLAPEGYAAVYRTNAYTRHGEHGNALLTRWPVVGHQHEDISDHRFEQRGLLHVEVEVQGRCVH
AIVVHLGLIPGSRVRQVERLQRFIAREVPAGAPLVVAGDFNDWGLQIKHMLAGFGLYEYDDAPQAFTYPA
RLPLVQLDHVYVRGLTPLGLQVPRGRIWWRMSDHLPLIAEFRL
>gi|319761679|ref|YP_004125616.1| phospholipase d/transphosphatidylase [Alicycliphilus denitrificans BC]
MATPARQTKTATDHHIQLLQGTQEFFPALIADMDAALSDIQFETYIFDCTGSGGLVAEALMRAAGRGVRV
HLVVDGLGTGRLPEPWRSRMMAAGVRIQVYAPLGPLGLLLPTRWRRLHRKLCVIDGCVLFCGGINVLDDF
HDPNHGELAAPRFDFAVRAVGSLVQQAGDTMEQLWWRMRAVRDVRHRRLSLALADLRAASAARVSARWAG
AGGRGMRAALLLRDNLRHRTRIERAYLRAIAQARREIIIANAYFVPGGKLRRALMLAARRGVRVRLLLQG
RYEYFMQYHAARPVYGALLAAGVEIYEYEPSFLHAKVAVIDAQSRRAWATVGSSNLDPLSLLLAREANVV
VRDASFAQELRQRLVRAMKNGGRPLDPHEYAARPWRARVLDRIAFATMRAALWVTGNRY
>gi|319761680|ref|YP_004125617.1| gtp cyclohydrolase i [Alicycliphilus denitrificans BC]
MSSEPAAEPNAPPSDEGTPVSVKIRERLAAARRRFHANDNIAEFIEPGELELLLDEVEARMQGVLDSMVI
DTAGDHNTQSTARRVAKMYLNEVFKGRYVHPPTITEFPNAEHLNELMIVGPITVRSACSHHFCPVIGKIW
IGVLPNEHTNVIGLSKYARLVDWVMGRPQIQEEAVVQLADLIMEKTQPDGLAIVMEASHFCMSWRGVREM
DSKMINSVMRGVFLTNSTLRREFLALIPGRN
>gi|319761681|ref|YP_004125618.1| bluf domain protein [Alicycliphilus denitrificans BC]
MLVRLLYVSRAVDTSPAAIEAILTQSRLHNPASGITGVLCYGGGIFLQAIEGGRTAVSELYGHIQRDERH
KDVELLAFEEICERRFGGWTMGHVNLAKLNHSIVLKYSEKPEFDPYMTSGKVSFALLEELMATASIIGRA
>gi|319761682|ref|YP_004125619.1| hypothetical protein Alide_0966 [Alicycliphilus denitrificans BC]
MSLNAFALIIVAGLIHAIWNIAAKKAGGDARFAFFTAVLMMLVWAPLGWWLGRDAVPLWGAREWGIVALS
GVLHVLYYVVLLRGYRKADLTVVYPLARGTGPLLSALVAVTLLGERLSALGAFGIAGVVGGVFLIAGGPG
LLRAAHDPQARRRVRKGMLYGVLTGVFIAGYTVVDGYAVKAMLLSPILVDYMGNFVRVLVLAPVALRDRA
ELTRLWAAQWRFALLVAAVSPVAYVLVLFAMQTAPLSHVAPAREVSMLFAALIGGHLLGEGDRAARLAGA
LLIAAGVAALGLG
>gi|319761683|ref|YP_004125620.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MKRGVFASRRVLGVLLLCAAAARAEVRLGALAVLEGEDTRRQWQPLADGLQRALGVPVRLQALAPAALEQ
AVARGALDFVVTNPGHYVALEARHGATRIATRSAGAQGDPAHAVGSAVVVRADAPGPPATLAALRGWRVA
AVAEEAFGGYQLAAVEWLRQGVDAEAGGLRRAFTGYPMQRVAQAVLSGEADAGVLRTCLLELWERDGVVP
AGALRVVPADDDGGTGAPPGCRASTPLYPGWAFAALAGTPPELSRQVLLALLAQPGESGALDGVWTVPAD
YQRVHDALRLLQVEPYAFLRETRLQALLHRYWGVAAALLALALVGVAYLLRVEVLVKRRTAELTHSLHER
ERLARQNAQHQEALGHLSRLSILGELSAMLAHELNHPLATIANYAAGLRRRAARGDLAPQDLERALRDIA
HESERAARVIGGVRALARKRVPDRVAIDPRALVGEALTLLGGWQPQAVRVACAPGAEALRVRGDAPQLLQ
VLLNLLQNARDVHRAAGCEGEPIGVEIVPEDGCLALAVRDHGPPLSPEALALLFTPFHTTKPDGLGLGLS
ISRGIAEAHGGALHARPVPPHEGGGMRMVLLLPLAQPEAADGDTPA
>gi|319761684|ref|YP_004125621.1| response regulator receiver [Alicycliphilus denitrificans BC]
MTDLPPPCIHVVDDDENFLRSLLFMIEGLGFDAVGYPSAEAFAQADPAPAPQGGCLLLDIRMPRMSGLEL
QRRLQRPDLPIVFMTGHGDVDQAVQALRGGALDFLQKPFREQALLDALNRAVAASAQAQRRQARQAQALQ
VLQRLSPRERDVARLLALGRSNKEVARELDISDHTVHVHRQSITRKTGSGHAADLARLILRAAPQELEE
>gi|319761685|ref|YP_004125622.1| cytochrome c class i [Alicycliphilus denitrificans BC]
MTHSTMTTSLRWLAAAAALAAGATLAADAPATVQLAGRAVPEIDKLPPGHYKELVQYGHELTTRTFAHIG
PEVGDVRRRLAGNNLACASCHQQAATKPFAMPWTGVAATFPQYRGREDEVSTVEERVNGCMERSMNGKPL
PLDSREMKAFVTYIAFLSKGIPVGANVEGAGMVQSKMPNRRANLEAGAKVYEAKCAVCHGSDGQGVRAGQ
PGDAQGYVFPPLWGKDTFNNGAGMNRLAMATRFVKHNMPQGTSFDAPQLTDDEAYDVSAFMLSKPRPEKA
NLEADFPARWNKPVDSAFPPYMLGAPADQHRYGPLPPLAEKQRQMAEQIKAQGAAR
>gi|319761686|ref|YP_004125623.1| hypothetical protein Alide_0970 [Alicycliphilus denitrificans BC]
MASHSPADPRAGAAIIVGCDFSSSPTPRKPIVLALGALEGPRVALHGLRRFDTLAAFGQWLALPGDWVGG
FDLPFGLPRALVAELGWPLAWPECMRHYRSLARAQIREAFAAFCAARPAGAKFAHRATDGPAGSSPSMKW
VNPPVAYMLHAGVPLLLDAGVHLPGLHDGDARRVALEAYPGLLARELIGRRSYKSDDPRRRTPERLAARA
DLLAGLERGATRLGLRLAAAPPLRDALLQDASGDGLDAALCLVQAGWALRRRRLGDARYGLPADMDPLEG
WIVTA
>gi|319761687|ref|YP_004125624.1| hypothetical protein Alide_0971 [Alicycliphilus denitrificans BC]
MDLLLVLALAAIGVFLLNARQQRRRIALLGQRLRPYQIERLMETLIQGYLRAMGETDAERRTQVLRMLEG
NEAQLCEQFERLAADFRHVPAQQARVSLLPVGLPFALQLFPGASFDMREALAIHARGIARSARNDAALAP
RDKAFTMTAELLLMQHSCHWFCKSRAVASARVLARHQTPYAQILASVSPETRAEYEKLLRRCE
>gi|319761688|ref|YP_004125625.1| lysine exporter protein (lyse/ygga) [Alicycliphilus denitrificans BC]
MPSIETLVAFFGVSALLALTPGPDNIFVLLQSAQRGWRAGMCVVLGLCLGLVGHTAAVALGLAAVFAASS
LAFTVLKFCGAAYLAWLAWGALRAPAGAGDAPAQGAAAPGDGPAARGGALRMVGRGVVMNLTNPKVLVFF
LAFLPQFADPARGAMARQVMVLGLVFMLATFLVFGAVACFSGAFGALLQRSARARLLLNRVAGLVFLGLA
LRLATAQR
>gi|319761689|ref|YP_004125626.1| amidase [Alicycliphilus denitrificans BC]
MSAPHDLSASELLAAYRARSLSPVEATQSVLDHIARWEPHLHATYLLRPEEALAQARASEARWLRGAPCG
PLDGVPATVKDNIATRGDPTPLGTAATPLMPAPADAPPAARLREAGAVIVCKTTMPDYGMLSSGLSSFHA
LARNPWDLSRGPGGSSAGAGAAAAAGYGPLHVGTDIGGSIRLPAGWCGVFGLKPSLGRIPIDPPYTGRAA
GPMTRTVQDAALMMQVLSAPDARDSMSLPAQPIAWDDFGQGPGRLRGLRIGLLLDAGCGLPVDPQVRAAV
EAAARLFEQAGAAIEPMPPFLTRHMLDGMDHFWRMRSFMDLRTLTPGQQGKVLPFIRDWAMSAAGLDGPQ
VFEASQQFHATRVATVHACAPFDYVLSPVAPMPAFAAELPAPTDDPLRPLEHIAFTVPFNMSEQPAASVN
CGYTSCGLPIGLQIAGRRFDDLGVLQMAHAFEQLRGPQRPWPEPPDRH
>gi|319761690|ref|YP_004125627.1| extracellular solute-binding protein family 5 [Alicycliphilus denitrificans BC]
MLTRRTALASGALATAALATPLHALAQGKKDSVTLALVLEPPGLDPTAGAASSIAEVTLYNIYETLTKIN
PDGSVSPLLAESWEVSPDLRTYTFRLRKGVTFQNGEPFDAAAVKFSFDRAGGDKSTNKDKRTFANLSTQV
VDAHTVVLINKDIDPDLLFLLGQATAIIVEPKSAATNASKPVGTGPYQLAAWSRGASIALTAWPGWRQAA
QLKVRRATFRFIPDPAAQVAALLAGDVDAFARVTPRSMAQFKGDPRFQVIVSGSRAKTILAINNAKKPLD
DVRVRRAIAAAIDRKAVIQGAADGLGVPIGSHYVPGAFGYVDTTGINPYDPEKARKLLAEAGVKTPLTLT
MTLPPAPYARQGGEVIAAQLAKIGITAKLQNVEWAQWLSGTYGAKNYDLTLISHVEPFDLSNFAKPDYYW
GYHSAQFDQLYDKIKNAARPADRARLLGDAQRLLAEDAVHAFLYQPQWVTVANKNLRGLWKDMPVFVNDL
SVLSWS
>gi|319761691|ref|YP_004125628.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MNTIEKIATSTSSTGATGRFGDETPLLRVRDLRRHYPLPRTRLMGPRAQLAALQGVSFDVAAGRSLGVVG
ESGSGKSTLARLVMALDTPSAGTVELLGRDLHRLSAPELRAARRDFQMVFQDPYGSLDPRQTVERIVAEP
LQALARATRAELRERAAEVLAQVGLRAGDAHKYPHEFSGGQRQRIAIARALITHPRLIVADEPVSALDVS
VQAQVLNLLQDLQERLGVTFLLISHDLAVVQHLCDEVLVLHQGIVVERGAPQALFGAPRHPYTQALVAAV
PRLDALMT
>gi|319761692|ref|YP_004125629.1| oligopeptide/dipeptide abc transporter, atpase subunit [Alicycliphilus denitrificans BC]
MALLEVSGLRISLPTRRGRALAVRGLDFSLARGDTLGLIGESGCGKSLTALALMGLLPEGAQASGSIRFN
GQELLGLDDRALCRLRGNRMAMVFQEPMTALNPVHSIGRQVAEPLRLHQGLTARQARAEAVALLERVGIA
QAAQRLDAYPHQFSGGQRQRITIAMALACGPDLLLADEPTTALDVTLQRQILELIRGLVAERGMALVLIS
HDLGVIAQTVRRTLVMYGGTVVESGPTRAVFGAQAHPYTQGLFAARPQFGAARVPGARLPTIAGTVPELA
DLPPGCPFAGRCPRTIAACHAALPPAVALGADHEARCIRLGEAP
>gi|319761693|ref|YP_004125630.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MSALPAPAPAPGFWRRALRHRSLMIGAALTALLLAAAALSLVWTPWPPYDMAMDAVLQPPGAQHLLGTDA
YGRDVASLLLVGARSSILVGVIAVGIGLALGAALGLLAAARGGWVEEAVMRLADFTFAFPALLLAIMLTA
VFGPGIVNAIIAIGIFYVPTFARVTRASARAVWAREFILAARACGKGPWRITVEHVLPNIASVLIVQATI
QFALAILAEAALSYLGLGTQPPQPSWGRMLAEAQTLMFQAPLLAVWPGVAIALAVLGLNLLGDGLRDLLD
PRLARGR
>gi|319761694|ref|YP_004125631.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MASFILQRLVTLIATLLGASAVVFVVLEVLPGNAAQVLLGPDAAPEAVAALAAQLGLDQPALVRYGQWMA
GLLTGRLGDSHAYSAPVLDLIAERLALTVPLALLSMLLTCALALAAGVYAAARHGRLGDWGVMGLAQVGI
AIPNFWFAILLILLFSVKLQWFSAGGFPGWSVEGGGGILPALKALLLPALALAVVQAAILARITRSAVLD
VLREDFVRTARAKGLTRRAALWGHVLRNAMIPVITVMGLQFANLLAGTIVVENVFYLPGLGRLIFQSIAN
RDLVVVRNCVMLLAAMVVLVNFVVDLLYAAIDPRVKARGP
>gi|319761695|ref|YP_004125632.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Alicycliphilus denitrificans BC]
MALMITDECINCDVCEPECPNQAISMGEEHYEIEPSKCTECVGHFDEPQCVAICPVACIPVDPAHKEDRE
TLWQKFERLRAAQSA
>gi|319761696|ref|YP_004125633.1| peptidyl-tRNA hydrolase [Alicycliphilus denitrificans BC]
MIKLFVGLGNPGPEYEATRHNAGFWWIDALARELKVVLAPERSYHGLAARANVAGHGVWLLQPQTFMNLS
GKSVAALARFFKIAPEEILVVHDELDLPPGQAKLKHGGSHAGHNGLRDIHAQLGTGDYWRLRLGIGHPGA
RAEVINWVLKKPAPDQRTLIEDSIAHSLKAYPAMLAGDMDKATQLVHTTKPPRPKPPRPATAAPQGGVG
>gi|319761697|ref|YP_004125634.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Alicycliphilus denitrificans BC]
MQFVAYERAKQGTGASRRLRISGKAPGIVYGGSAEPQMIEVDHNALWHALKKEAFHSSILDMELNGQVTK
VLLRDVQYHPFKQQVLHVDFQRVDDKTRVHLKVPLHYEGLEGSPAVKEEGCTVTPLIHEVDVMCMPSQLP
EFITVDLSGLTSKSAPGVQSLKIPNGVKIVVRGSNKNPALVSIKLPEVVADASAAPAPAAAPAKKGKK
>gi|319761698|ref|YP_004125635.1| ribose-phosphate pyrophosphokinase [Alicycliphilus denitrificans BC]
MQTNTPDFLVFTGNANPGLATEIVRNLGTTLGAVDAGRFSDGEVTVEIKQNVRARDVFVVQSTCAPTNEN
LMELLIMVDALKRASAERISAVIPYFGYARQDRRPRSTRVPISAKVVANMLQAVGVARVLTMDLHADQIQ
GFFDIPVDNIYASPVLLGDLNEKKYENLIVVSPDVGGVVRARALAKQLGTDLAIIDKRRPKANVSEVMHV
IGDIDGRNCVIMDDMIDTAGTLVKAAEVLKERGAKKVYAYCTHPIFSGPAIERIANGTALDEVVVTNTIP
LSDAAKGCAKIRQLSVAPLIAETIQRISKGESVSSMFSD
>gi|319761699|ref|YP_004125636.1| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase [Alicycliphilus denitrificans BC]
MRALYDVPAPAKLNLFLHVTGRRPDGYHLLQSVFMLIDWCDTLHFELRADGAISREDLTQPLPADDLVVR
AARALQAATGCGLGAHIGVHKRVPAQAGMGGGSSDAASTLLALNRLWGLGLPRARLHAIGLGLGADVPFF
LCGRNAWVEGIGDIIRPLDLEHQLPDASFAVVKPAAGLDTKAIFSHPSLKRDSSCATIQGFAAMPYQFGS
NDLQPVAQALCPEIDQAIDWLASKGLRGRMTGSGSAVFAQATHAVDLHDAPAAWQVKMCENLGLHPLSDW
ALDERIKG
>gi|319761700|ref|YP_004125637.1| outer membrane lipoprotein lolb [Alicycliphilus denitrificans BC]
MTAPRPARGRLLLAGLALALLGACAQPPRPAGAAADHWSGRLAVQVEDASAQSFSAGFELQGSPQAGELT
LFNPLGNVMAQLQWRPGHALLRNGGEQRQSTSLQALVLELTGSDLPIAALFGWLKGEAVQASGWQADLSA
LAQGRLTATRHTPAPQTTLRVALSL
>gi|319761701|ref|YP_004125638.1| tetratricopeptide tpr_1 repeat-containing protein [Alicycliphilus denitrificans BC]
MDYYGLMVHSLRRIRPAALACVAAACIFPALAQTGERASEPASAPVQEEETAALNAELFYELLLSEITTS
EGDPATGYNLMLDAARRSGDPQLYRRATEIALQSRSGEYALAAARAWKEALPQSRDANRYLLRILVALNR
IGDSAEPLRQELASSSARDKVSTIRALPLLYARAGDKALAARVVRLALEEELNNPATGPMAWTTVGRMYL
AADDKARALEAAGNALAQNPGDDGAAMLSLQLLENAVPEAEALLSRYLAGKPLPEVRMAYARVLLESQRL
ADAQAQVDAVTREQPDNAQAWLIRASLQLQAGELDQAEAALQRCTQLLEQDPATEQRQRALTQIYLMQSQ
IAEKRGDLAQAQAWLARIDDAEQLLAVQSRHASLLVRQGRLDEARALIRAIPEKGPDDARLKLQAEVQLL
REAGHYQQAYELQGKVVALAPQDNELVYDQAMLADKAGRTAEMERLLRTIIARQPDHHHALNALGFSLAD
RGVRLQEAKALIVKALEYAPDDPFITDSLGWVEFRLGNRKEALDILERAFKTRPDAEIAAHIGEVLWSLG
QRDRALAVWREGLRINKDNDVLKGTLKRLRVRP
>gi|319761702|ref|YP_004125639.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans BC]
MPELPEVEVTRRGLADAIGGATIRAVALGKSLRWPLGLAPGELAGQRVLAVRRRGKYLLLDLQQGLLLIH
LGMSGSLRFAHGLPQRGPHDHFDMETDRGTLRLHDPRRFGAVVWAAGEDDPQARKLLGTLGVEPLGEDFD
FQAFHAALRASRMPIKQLLLAGRVVVGVGNIYACEVLFLARIRPTMRASAIGSQRARRLHGAIREVLARA
VERGGSTLRDFSGVDGNAGHFQAEANVYGREGLPCRQCGTPVRLLRQGQRSTYFCPNCQRS
>gi|319761703|ref|YP_004125640.1| hypothetical protein Alide_0987 [Alicycliphilus denitrificans BC]
MGSSFNERFDQHGAWRRAFAQQLKRLGQWMGAHDLMDAAVGERLQRLEEQVRSDKVTVAFVGEFSRGKSE
LINAIFFAGYGRRIMPATAGRTTMCPTELGYEGGTAPSLRLLPIETRMQPLGLAEWRLKPDLWVNVALDM
DDPAQMAQALEKVSEVRRVSVDEARALGFWSDEAGDENPRRDAGGMVSVPMWRHAVINFPHPLLRQGLVI
LDTPGLNAVGVEPELTINLIAQAHAVVFLLGADTGVTRSDLAIWRDHLGGAEDAFDARLVVLNKIDTLWD
QLNSPAQVQAQLERQRHTVTEVLGVPLGQVVAVSAQKGLVAKINCDDDLLEASGLPQLEVALGTGIMGRR
QSILRAAVAGGVTGLRNEARRVINIRRRDLDDQMLELRSLRGKNASVIDAMRGRIEQEQQEFEACTARIQ
AVRAVHLKMLRELFHQLGPRALKAQLAPLTEALESSGLKLGVRKAYGETFASVRAAMEAAQATGGEIQAM
LGGTFRQLNTEFGFSLQVPVAAQLGAYVREIAAIEQRHLQYVGMGNVLRLARPEFTQRLLRALGLRLRTV
FEAAANELEMWSKTATAQLDAQLRERKRSFERRIEAVNRIRQAASGLVERIAEIEAAEENLAELELRLSE
LTDELVQQPGVEEDLPVPDIPETAPQPLTPA
>gi|319761704|ref|YP_004125641.1| a/g-specific adenine glycosylase [Alicycliphilus denitrificans BC]
MTQLPVEIAAQVVRWQAGHGRNHLPWQNTRDAYRVWLSEIMLQQTQVATVLEYYARFLARFPDVVQLAAA
PQDEVLALWSGLGYYSRARNLHRCAQIVVQQHGGRFPRTVPELAALPGIGRSTAGAIAAFCFGERAAILD
ANVRRVLTRVLGFRADLAEAKNERELWRLAEALLPKGDLHAAMPRYTQGLMDLGAGICLPRNPSCMLCPL
QNVCVARRDGNPQDYPVRTRKLKRSAQAWWLLLRQDGAGRLWLERRPSAGIWAGLYCPPVYASRAELDAA
LPPPAAGAAEDLPPFIHVLTHRDLHLHPVLARGAGAAADPHCAEAQQAGWFMPAQCLELGLPAPVRRLID
AL
>gi|319761705|ref|YP_004125642.1| hypothetical protein Alide_0989 [Alicycliphilus denitrificans BC]
MSLEVVVITGMSGSGKSVALHALEDAGYYCVDNLPPELLSSFVALEHAHHGHRVAVAMDVRSATALPLVP
RQLDRLREQGVQVRSLFLDATTGTLVRRFSETRRRHPLSQDELIEGRRALVQTIELERELLAELRAQSHV
IDTSTLRPSQLLSYVKDLLAVPPSQLTLVFQSFAFKRGLPFDSDYVFDVRMLPNPHYEPALRPLTGKDAP
VAEYLRQQPEVALMLSHITQFLEHWLDALAQNHRSYVTVAVGCTGGQHRSVYLVEQLAERFTGRWNTLRR
HRELDGI
>gi|319761706|ref|YP_004125643.1| DNA repair protein recn [Alicycliphilus denitrificans BC]
MALRRIALRDFVIVQALDLDLHAGFTVLTGETGAGKSILIDALQLLLGARADTGVIREGAQRTDICAEFD
AGTAALGAWLEEAGIAHDGALLLRRTVDLQGKSRAWINGIPATAAQMRALGELLLDIHGQHAWQSLTRPD
AVRGLLDAYAGAQAEPLAALWAAWRDAQKALAHAREAQDTLQQERERLQWQIGEVDRLAPREGEWDGLNA
EHARLSNAQALLDNAQGALAALQDDEAGGALAALAQAQHLLQAYEHIHEDFRAMNEVLASCIAQADDVAH
SLQGYLRHAEPDPDALERLDARLSQWMQLARRYKRTPSELPALLDGWKESLRRLDDAADLAALEAAEQAQ
AAAYRKAARALSQKRAKAAPKLAQAITQAMQGLGMAGGRFEVLVDKAAEPGPHGVDQVAFLVGSHPGMTP
RPVGKVASGGELSRIALAISVATSALGEAPTLIFDEVDSGVGGAVAETVGRLMQQLGRERQVLAVTHLPQ
VAACADHHLIVSKHRHAEGTTSAVATAGANERVAEVARMLGGQQQSPTTLAHAREMLDGARAATAAG
>gi|319761707|ref|YP_004125644.1| ATP-nad/acox kinase [Alicycliphilus denitrificans BC]
MKPIFRRVAVIGKYQVPVAGSASGNSRQIIESIARFIAQQECEPTLETETAASTGLTGYHTLDVDGIGQH
CDLCVVVGGDGTMLGVGRRLAAYGTPLVGINQGRLGFITDIALQGYQDVLTPILHGDYEEDVRPLMQARV
ERGGESVFEALALNDVVVNRGSTSGMVELRVEVDGVFVSNQRADGLIVASPTGSTAYALSAGGPMLHPSI
PGWVLVPIAPHTLSNRPIVLSDATEIAIEVAGGRDISANFDMQSLASLQHGDRVLVRRSAHRVCFLHPRG
WSFFATLRRKLRWNEGGS
>gi|319761708|ref|YP_004125645.1| heat-inducible transcription repressor hrca [Alicycliphilus denitrificans BC]
MLDDRSKLLLKALVERYIADGQPVGSRTLSRASGLELSPATIRNVMADLEDLGLIASPHTSAGRVPTARG
YRLFVDTMLTVQQEQLPALQIKPEQPQKVIANAAHLLSSLSQFVGVVMAPRRASVFRHIEFLRLSERRLL
VIIVSPDGDVQNRVIFTESDYTQSQLVEAANFLNANYAGLTMEQVRERLRPEVDKLRGEIAALMQAAVNA
GSQALSESQEEVVFSGERNLLAVSDFSGDMGHLRRAFDLFEQKTQILRLLDISSRAEGVRIFIGGESQVV
PFEELSVVSAPYEVDGQVVGTLGVIGPTRMPYDRMIQIVDITSKLVSNALSHHK
>gi|319761709|ref|YP_004125646.1| dimethylmenaquinone methyltransferase [Alicycliphilus denitrificans BC]
MNGFQICRRTRRVAPHIVKAFSELPVANISDCMARMSAAGAQLRPYHAKGVLAGPAFTVRSRPGDNLMIH
KALHMAEPGDVIVVDAGGDLTNALIGELMVATAIKRGIAGFVMNGAIRDVDAIGAGTFPVYAAGVTHRGP
YKDGPGEINVRIALNGMVIEPGDLIVGDADGLLCVPFDEAETLLEATRRKQDAERVTMREIEDGALDTAW
IDAALKRLGCEIKV
>gi|319761710|ref|YP_004125647.1| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MRIAFLDRATLCPQTVLRNPEFEHELCVYESTAPAEVARRIADADIVIVNKVRLDRASIEAAPRLRLVAV
AATGTDNVDIAACRERGIVVSNIRNYAVNTVPEHTFALIFALRRSICAYRDAVRAGRWQDSGQFCFFDHP
IRDLAGSTLGIIGDGVLGQATAAMGRALGMRVLFSTHKGRSGQGTLYTPFEKMLEQVDVLTLHCPLTPAT
KHMIGAQEFAQMCRRPLLINTARGGLVDESAVGPALAAGQIAGAAFDVVSVEPPPHNHPFMQLIGRPDFI
LTPHVAWASDEAVQALADQLVDNLEAFVRGEPRNVVGA
>gi|319761711|ref|YP_004125648.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MMTFKQLEAVYWVTRLGSFSQAAAKLHTTQSAISKRVQELESLFSVELFDRTQRTSRLTEKGEEMYLVAK
RLLEQRDEAAAQFTSSQEVVRRLRIGVTELTAMTWLPRLVELVRTHHPKVILEPDVDMSVMLRDKLLANE
VDVIFVPDACGDERFTMKRLGSVENAWMCKPHLFDGFKIRRLHDLSSHTFLTQGDKSGTGVIYNEWLDAV
NMRPTNIIVCNSLLAIIGMTVSGLGFSYLPRESLEPLIQADYLQVLKVTPPLPKMNYVAAYKSEQRSTLI
SSIVLLAQECCDFSRVLQKS
>gi|319761712|ref|YP_004125649.1| aminotransferase class i and ii [Alicycliphilus denitrificans BC]
MFSERLASVKPSPSMAAKAKVDALRAQGRKVIDFTIGEPDFDTAAHIIEGGINALKSGHTRYTASAGTPA
LRAAIARKLERENQLSFRAEEIVVGCGAKHIIYNAFAASLNDGDEVIVPAPFWVSYPDMVALQAAKPVIV
PCTESSGFKLKAAELAAAITPRTRWLILNTPNNPSGAVYTREELAAICEVLRAHPQVWLMTDEIYEHFVY
NGARHVSPLSVAPDLRERTLLVNGLSKAYAFTGWRIGYGAGPLELIKRINLLLTQSTTCASAMSQEAAVV
ALDGPQDCVAEAAQLFAKRCDRVMQLIGQIPGLSCVRPDGAFYTFVNVQGLLGQITPEGRELASDVDVME
YFIMQAQVAVIDGTSYGCPGYLRISFATSMDEIENGFAAIAKAVAACRPAMGTIHA
>gi|319761713|ref|YP_004125650.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MTIQLDFSLFTQPEFLGQVSKGLLGTLELAALAFALAIAMAVLIAVMRMSNSKACQAVAAAYVEYHQNVP
LLVHIFLWYFGVAALLPAGVQQWINAHNSEFIFAFIGIGLCLGAYMSEDLRGGIRSIPTSQLEASRALGL
SYLQAFRLVILPQAVRVSMPALINHTVLLFKNTSLAMTVGAVELTYVTKEVESQTFRTFEIYLASTVMYL
GLSLLLMWFGAVIENRIRIRNR
>gi|319761714|ref|YP_004125651.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MNDIINIIQDNWELLLVGQYPHGPIGGLAVTLFLSLVGIVLAFPLGVVLALCRLSPFRFLSWPATAIVYV
VRGVPLIMFIFWTYFIVPHILGRPVAGITTMLVTLVIYQSAYLAEIVRAGMQGLPFGQTEAARAIGLSYM
QTTFKVLLPQAIYNMVPAIISQFVSSIKDTALGYVISVNELTFAASQINANLLTMPFQVYILLASIYFVI
CALLTQLARYLERRIALRRAGKAGASAAVASAMQQANV
>gi|319761715|ref|YP_004125652.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MNNAMDKTTNNGAPMISFRGVHKWYGEYHALNDINATVGKGEVIVVCGPSGSGKSTLIRTVNRLEPIQKG
HIEFDGQDVCSPNLDINKFRSHVGFVFQSFNLFPHLSVTENIELAPVTVLGEKRNSARERALKLLERVGL
ASKASAYPGQLSGGQQQRVAIARALAMNPPAILFDEPTSALDPEMVGEVLQVMKQLAREGMTMMCVTHEM
NFAREVADRVWFMDHGVLIESDTPEEFFRNPKSERAQRFLNDLRSH
>gi|319761716|ref|YP_004125653.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC]
MPFKNRLISSLAAAAASMGFAALSTSAMADQLADIKAKGSLVCGVLGTSKPFSFPNPQTREIQGYDVDFC
SAVAKSLGVKLEIKPISVAARIPELTQKRIDVIAANLGWTAERAQQIAYSDAYYVALQKVAVKRGAFARS
TDLAGKRVSATKGSTSEIAIRAFLPTATPVTFQDPPPAFLALQQGKVDGFVVTEMVLVQLKAQSEADHPI
DILEPPLAEEFWGIGMRKEETALSGHVNKTLRQMEASGEAARIFDKWMGAGTDFKMKRGFVVKPVQG
>gi|319761717|ref|YP_004125654.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC]
MSSKIRLFSTLAATAMGLGVAALSASAHADQLANIKAKKTLVCGTFAAIPPFGYPDPKTRETIGSDIELC
RAVAKEMGVNAEIRGFPVGVHIPELKLGHIDIIIANMGYTKTRAEQVEFSDAYNVGAEVAVVPKDSGIKT
LSNLDGKKISATKGSTSETAIKLRLKEAQPLTYQDASSAFLALQQGKVDAFVINNVSAAAFANQSQKGPK
PSVVLDEPLYVQPVVIGMTKGETALIREINTILRKLEDSGYMDQHWNKWFGDGSDYKLKRPYKVTPIKDV
KFEPLP
>gi|319761718|ref|YP_004125655.1| asp/glu/hydantoin racemase [Alicycliphilus denitrificans BC]
MVLPRIGVLIPSTNTAVEADFQRVLAGHASVHSERLFIPDGQMSEAHLDEMNRDLEARIRSLASAKVDVV
AYACTSGSFYKGAAWDEAVIETVQRVAGVPCTTTSKAVAEALRCVAPSGAIAAITPYPEWTNQRLRQYYE
AQGFSILALAGDERSARGGHRFVNDQDPAEIVRFGLENMHEDARALFCSCTAWRAFEALPALEAALGIPV
VTSNQATLWKASRMLNLQLPAQAGTSGPFGRLSHF
>gi|319761719|ref|YP_004125656.1| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Alicycliphilus denitrificans BC]
MVNPADILQIARQLRQSGMQAIELRDAETRLRIVARNGGLDAATGTAASASDGEAAAMDAIVRANALGVV
RLRHPSQVGAGLMAGARLQAGESAIFLESRGVIKAIDAPIDGEVTQLFVADGDRADYGMPLFAMRTQP
>gi|319761720|ref|YP_004125657.1| allophanate hydrolase subunit 1 [Alicycliphilus denitrificans BC]
MSTAADIAQAAPRLAVSALGTDALLFESLAPLSHEAQERILMVADQASQWRGVEEAVPGMNNLMLIFDST
QVSSAEMQSRVQQAWLSPVHVRRKAREFELPVVYGGERGLDLEHVAAHNGISVADVIELHSSAIYTVYFL
GAHPGFAYLGGLDARLHTPRRAQPRLKVPAGSVSIGGAQAGVQAQTLPSGWNLIGHTDRRFFDPASATPA
LLAPGDIVRFRAVKALP
>gi|319761721|ref|YP_004125658.1| urea amidolyase related protein [Alicycliphilus denitrificans BC]
MIEILSTGGLTTVQDAGRRGYRRFGVGIGGPLDSLATTIGNLMLGNDPEAAFLEVIIFPLKLRLRQAARI
AVTGSDAQVEVDGQRFPPWWSVPVQPGQVVTLRAPANGGVAYVCVSGGIDVPPMLGSRSTDLKAGFGGFH
GRTLRKGDVLDVLSGMHAHGSRRFGVLPPCAGLPMPREGDGNASSATIVRVLPAAQWDCFSEAVRNEFLA
ATWQITPDSNRIGLRLSGPEIKPVQGMELLSHGIIPGVIQIPPHGQPIVMQCDAQTAGGYPKLATVIAAD
MWRLAQTPIGGKLRFQCVDMEEALAANRQVRDYVARVQRAMELLY
>gi|319761722|ref|YP_004125659.1| lamb/ycsf family protein [Alicycliphilus denitrificans BC]
MTTVDINCDLGEGFGPYRMGDDAALMKVITSANIACGFHAGDPGIMVNTVQLAMENGVDIGAHVGFADLQ
GFGRRVLNLEPAELKAMTWYQLGALQGIAQAAGRRLQHVTFHGALGNMCFADADLAATLMAAIKAFDAGL
TVIAPPMTEMEKAAEQAGLPVKRVVFADRAYDDRGLLVSRKLPGAVIHDPEAVIQRVLGMVQDGAITSQS
GKRMPLAIDSVLVHGDTPGSASLASLVRERLQHAGVQVRPLSQR
>gi|319761723|ref|YP_004125660.1| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Alicycliphilus denitrificans BC]
MAFDIARIKSLITAAAEAQVDELELSEAGMDVRILRLADSVQLSAPGTAVAGQPAQTPSAPLAVDRQVQA
ESAASPPPVHTLTAFMAGTFYRSITPGGEPLVQEGAAVAPGTVLGVLESMKIMNEISSESQGIVKRILCE
NAQVVSAGQPLFELQEC
>gi|319761724|ref|YP_004125661.1| acetyl-CoA carboxylase, biotin carboxylase [Alicycliphilus denitrificans BC]
MLKKVLIANRGEIALRVQRACRRLGLASVVVYSEADRDALYVRHADEAYCIGPAASAQSYLDGSAILDAA
ALAGADAIHPGYGFLSENAGFADKVAQAGLVFIGPSAEVMRTMGDKVCAKQAMIAAGVPCVPGSPEALGD
DESQIKALAAEIGYPVIIKAAGGGGGRGMRVVESEDALLPAIAMTRAEADAAFRNAAVYMEKYLLAPRHI
EIQVLADAHGKAVWLGERDCSMQRRHQKVIEESPAPGLDAAAVAEIGERCARACEQMGYVGAGTFEFLYE
KGQFFFIEMNTRVQVEHPVTEWVTGIDIVEMQLRIAAGERLPWTQEDIVRKGHAIECRINAEDPRSFRPS
PGLLCEWIAPSGPGVRVDSHMYGGYEIPPFYDSLLGKLIVHGSDREEAVARMRAALHELVATGVQTNVPL
HQELMLDPAFLQGGTSIHYLEQWLMKR
>gi|319761725|ref|YP_004125662.1| sporulation domain-containing protein [Alicycliphilus denitrificans BC]
MARMPTYTAHAAHAADQPGAAAQYTSVAPALYRAALGPVNLEHYLAAFERLDATGRVLPGWNLAAALCPL
GWLVLRRLWRQALLVFAALASGALLLWAVGHRWLALPWPMLAGLALAGLTVLCGGLGLYGDALVHADVRR
RIDGAVSAASTMREAMGLLQRQASSRRRLLWVAVASAALAAAAAWLAFAGAMGDRRMPDAGEPASVAPSA
PEPEPGPQPPVVGGEQPVAPAADQAPVQPLLQEPEAEPEPEVAQAPAQEPPQAKDPAPARPPQRAAQRRL
YINVGLFADPENARRTQARLRQAGLPCAVEPLVRSDGRRLQRVRVGPFSSAAQANAAVAKVRAMGLEAVA
AAQ
>gi|319761726|ref|YP_004125663.1| hypothetical protein Alide_1010 [Alicycliphilus denitrificans BC]
MRYFSRAGGVAGMAALALLALLAGCSALGPGAGPAQPIGASTAPVGGTCDAKGAQWAVGKSGTARVVEEA
RVRAGARMARVVRQGQPVTQVFDAQRLSLEVDGGGKVTAARCG
>gi|319761727|ref|YP_004125664.1| oxygen-independent coproporphyrinogen iii oxidase [Alicycliphilus denitrificans BC]
MSIPITPAAQPGAAPHDVQHYMRPGLLQLTSLPPLSLYVHLPWCLRKCPYCDFNSHQAPGGSEALPEARY
TAALVADLEAALPLVWGRTVHSIFIGGGTPSLFSPEAMDRLLGDIRARLPLDAGCEVTLEANPGTFEKER
FRAYRGAGVTRLSIGVQSFNDRHLQALGRVHDRAQALAAVEEAAQAFETFNLDIMYALPGQTPAEQEQDM
RQALALAPPHISIYHLTIEPNTYFAKYPPRLPEDDQAYAMLDRITELTAAAGLSRYEVSAYAREGHQCQH
NRNYWQFGDYLGIGAGAHSKLSFAHRIVRQVRLRDPQLYMTGALAGRAIAQDEDVRRADLPFEFMLNALR
LREGFALQDFTERTGQPLTAIAQGLQQAEARGLIARDMGHVRPTERGFDFLSDLQALFLGD
>gi|319761728|ref|YP_004125665.1| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family [Alicycliphilus denitrificans BC]
MKLVLASNNRGKLAELQAMLAPLGVELVAQAELGVGEGEEPFHTFVENALAKARFASAHTGLPALADDAG
LCVEAFGGQPGVQTAYYATQFGYDKGDANNVRALLEQMEGIEDRRAAMVSTLVAVRSPQDPEPLIAVGRV
AGEIARAPRGAGGFGFDPVMYIPAFGKTFAELPAEVKNAHSHRGRAAQQMLALMREHWFPGASKR
>gi|319761729|ref|YP_004125666.1| ribonuclease ph [Alicycliphilus denitrificans BC]
MDPTTPFARSGGRAPDELRPVRITRRYTMHAEGSVLIEFGNTRVLCTASVEEKVPPHKRGSGSGWVTAEY
GMLPRSTHTRSDREAARGKQSGRTQEIQRLIGRSLRAVFDLKALGERTLQIDCDVIQADGGTRTAAITGA
WVAAHDAVGTLLAAGKVAASPITGAVAAVSVGIVQGQPLLDLEYVEDVACDTDMNVVMTGAGHYVEVQGT
AEGAAFSRREMDQLLALAEKGIAELVLLQQESLRN
>gi|319761730|ref|YP_004125667.1| stage ii sporulation protein e [Alicycliphilus denitrificans BC]
MKFSVFQLSRRGGREKNEDRMGYCYTRASALFVLADGMGGHPRGEVAAQIAIQTVSAMFQHEARPVLHDV
PEFLSAALLAAHHQILSYANHKGMLDTPRTTLVAAVTQGGCAHWIHCGDSRLYLVRGGELLMRTRDHSYQ
ELRSAAMAGLGHANRNVLFTCLGSPTKPLFDTAGPVPLQEGDRLLLCSDGLWSQLDDAAIARQITRQAVS
HAVPDLVEDALRRGGDASDNVTVVAMEWETPNTCEPAQAVTTDSISDEVFASTIQAGPLEGFTDDLDDAA
IERSIAEINEAIRRTAARKA
>gi|319761731|ref|YP_004125668.1| serine/threonine-protein kinase-like domain protein [Alicycliphilus denitrificans BC]
MSKVKPAPLLPDTVIGGYRVVRKLAAGGFGVVYLAMDAEGQQVAIKEYLPASLVTREPGELLPKVPPEKL
SLYRLGLKSFFEEGRSLAQISHPSVVSVLNFFRENETVYMVMNYLEGASLQDFIITARDLKTQKVFREST
IRSLFDEVLRGLRIVHQHKMLHLDIKPANIFITDDNRAVMIDFGAAREVLSKEGNFIRPMYTPGFAAPEM
YRRDAQMGPWTDIYAIGACIYACMQGFPPNEAPQRQDKDRLTLALHKLRGIYSDNLIEVVEWCMALDPLS
RPQSVFALQKELSREGERRYTKLTVAEKMRMQFDSLVADTRKSLQKTGEATHPGARSK
>gi|319761732|ref|YP_004125669.1| hypothetical protein Alide_1016 [Alicycliphilus denitrificans BC]
MTGYASVQLAMAPEAEGRAGSARRLGLEIRSVNSRFLDLSLRLSDELRAQEPALRALLTQQLKRGKVEVR
AFVDTDESAALAEPTPRLLQRLGAVQDAVRSWLPDAAPLTVAEALRLCANAGAPAQDWSAPMLELAQRAL
DDMVAAREREGERLAAMLQDRLAQLRALARQAAPLVPQLVEQQRQRFMERWREAMQLAEGTAVPEAAQDR
ALSEATAFAIRIDVAEEITRLQSHLDEIERLLKKGGEVGKRLDFLIQELHREANTLGSKSAAMDLTRISV
DMKVLIEQMREQVQNIE
>gi|319761733|ref|YP_004125670.1| hypothetical protein Alide_1017 [Alicycliphilus denitrificans BC]
MQGDLSRETFDPRSHYTAVRLQQGRVLTDADFNEQGDITRHRHERLARDVIGASGGPAEGAGFALTGGMR
ALAVHALDANNVWIAGEDGVLLVSSNGGGAWTVADTGSTRHLRAIARAAATGWAVGDGGTIARTTDAGAT
WAAQGSGTLQTLRGVAAFDAQRAWAVGDGGLALATTDGGATWTQHATGVARLYAVAFTSAQNGLAVGQGG
AIVRSSDGGQSWARVDGGTTATLRAVMLNGAQALAAGDGGTLLVSNDGGATWSAATSGSTARLRALRMRN
ATTGWAAGDGGTLLATNNGGTTWTAQPVAGGPMLTGLSVAGSADAWLVGAGQVWRVAAGGAGAPATLPAA
SLLIGPGCYYVQGQHCVWEQGASLANQPDGGVAQRLAPGTYLIYLRAWQRHIGALEDPAMREVALGGPDT
ATRARQVAQVRALALPAPPNNTPWTCGAAIAGWDALAAPPGARLAARATPQLAATGVCDIAASAGYRRLE
NQLYRVEIHSVDANTGAATFKWSRENGSVAYAVQSIAVDTVAQLTTVRVAARGRDANLDLAPHDRVELVD
DAAALQQRAGQLFEYLNDGDDALELVLAGVPTGSLGQDTGLHPLLRRWDQRPTAAGQNALAVVEGSWIPL
EDGVEVRFAPGGSYRVGDYWQIPARTATADVEWPLDDDGAPLVRPPAGVQDGWARLGLVTVNAAGLIGAV
TDCREWFPQLTRLTQLLYVGGDGQEAIPGAAVAEPLRVRVVRGALPVEGARVRFTVEAGGGTVGSPAAGV
TDATTDAAGQAACPWTLGAAGPQRVRAHLLGSDGDPVAGQTLVFAAMAQANVQAGGGCAVTIGKGGNFEQ
LSTELLQKLLKERGGQLCICFLPGQHALDGLSIKQSDAPMRLSLHGCGPTAVVDVAGPIALGGFAALELR
DLQLAMAPKAMLQLTNNAQLGLHGLRIDGKQEAPQPWVVVDGTAELRMHQCEVAAAAPASVVVQNAQGLC
EIMHSQIAGDLAFYGMPGTDAAGAAPPAAALVNALNNGDFQVPAGRGQLVVAHNQLARLNLGQDMVKQLI
ARKFDGLFHTVVLQGNSLGAAPSLCAGVFMSVTGNHFTATKPTGNLYGAMVGRRAAASGNVGELVGDTAT
LYFLVTKGQFRGAANMVFTLPQSTA
>gi|319761734|ref|YP_004125671.1| hypothetical protein Alide_1018 [Alicycliphilus denitrificans BC]
MSLLTPERLYQLLPAIHRLRDAEQGQPLRALLAVIEQELTALETDTARLYDNWFIETCDEWTVPYIGDLV
GARPIRPVPSAGVSARAWVANTLAYRRRKGTALVLEQLARDVTGWPASAVEFFQRLATTQHMNHVRLASA
ATASVRDAARADLARASAGAFDPFAHLLEVRNADTAGGRFNIPNVGIFLWRLRAQPLGRGAPGDADADFI
SARRNAAGWWHMHPAGVDAPLFNLPRTETGGAVTQAAREENAGAPLRPLALHAELERLRAGDAGTTPVFM
TGHDPVLRVFVRLAGEALPVEIAREGLWICDIPDAVTLPVPPRVAAIDVQRGRMAFPAALDVQQVWLHAA
HGSAADIGGGPYDRGDALRAASASLSEGTAAQGDAGGFFDPAVWQVGVTHLLPLGATGTLFATLRDAVQA
WNALPAGRTGVIVLMDSLTESDAAPLAVNIAEGSRLMIVSGQWPPTPVANALPGTMARQPGRFEARQTRA
HWQGRLQVLGTAAADALDPGALFLNGLLLQGPLDISGPLGQVELAHCTVLPGGTHITVGSDSPRLALRVL
SSLAAPITVAGPVGSVAVADSIVGLQDAGAAALSAPQAPLDLLRASFLGAVHGLTISASDCIFDAPAVAE
RRQTGCVRFCYVPPASAVPRRYRCQPQLETDARIAALRAAALAAGLPPPTAAEEDAVRAEVEATVRPLFT
SRRYGAPGLVQLDLRCAAQIRTGAESGAEMGAYERLRQPQREANLRDALAEYLRLGLTAGVYFAN
>gi|319761735|ref|YP_004125672.1| hypothetical protein Alide_1019 [Alicycliphilus denitrificans BC]
MSDDTLAGCHCCEGQQPREPIYNAPGLPALAWRVDTQPGFHQRMLAGLPLWHPGEPDPSAPRPLAALGTR
ETDDATVALVDAAACMADVLSFYQERIANEGFLRTATERRSVLELARAVGYELRPGVAAGVHLVFTVEDA
PGAPGVCTIAAGTPIQSVPPQDKLPQVFETSEELLARAEWNALRPRLARPADMALLDVAGDSRRLVLLLP
QGSMPSGTDGLHPGLASGDLYRLDPGLPVDATVDALEVARVYLGADANTIQAGDLLLFVGKNGAALRQMV
LRATEVEDEKALQRVRIGLEPLPDPVAPAAPPRLQWHVPVGVLSFGNFAQAQLESVSFTSGNIANTISGH
AWQESELQAMVTIQGWSSLQLVQAVAASLHPPATPVAPEAGAFSFGARLGFFGNNAPQWNSLPASNTKGS
AAYYPTNWDSTNPSVWTDSQGAALTPQHAYLERPVPGLVPGSWVVLDSPSVKAGTYALYDAREAARADYG
LSGRAMALRMAGSDGKPLPAPPAEAFKFRDTTAHVASRRQPLVDLPIEAPVAAGTVRVELSTMVLGLARG
KPLAFVGPRSDIPGVDAAEIAVLDDVVHANGRSTLVLKDKNGLQFSYVREGLRIHANVVAATHGESVQEV
LGNGNAAQAFQQFTLRRPPTTHLSAASAAGAQSTLALRVNGLLWSERPSLYGAGPDEHVFATRIDNEARM
SLLFGDGRQGARLPTGQMNLRASYRTGLGRDGEVAAGTLTMPRAMPLGLRGVTNPLPAGGAQDPEKLEDA
RRNAPLTLLAFERVVSLPDYQDYARAFPGIGKARADLVSAGGALRVLVSVLGATGGAPDGEVLGNLRKAI
ADQSDPSQQFELAAAALRYFRCSASLVIDPQYETDAVLADGRARLLQAYGFDARDLAQPVTAAAVQALLH
QVPGVVAVELQVLQPYGEGAASDGALQVLPAFGARWNAGAMQPAELLLINPAAVQLLEAKP
>gi|319761736|ref|YP_004125673.1| hypothetical protein Alide_1020 [Alicycliphilus denitrificans BC]
MTTQQYLCKNPRRIAALRAAALETPPRWFNGIEYLEVMHGEPRLVLHFAHDLSQAPAVPLAASNVEVRGG
QRVRDPRVLNVAASGRQLAVELDGTGDFSRYTLRLVASAGSDAPPDGIDPALAQIAFGFKVDCPSDFDCR
AAGSCAPEIPHVPDIDYLARDYQSFRRLTLDRLSVLMPGWRERNPADLLVTLAEALAYRADEIAYFQDAV
ATEAYLGTARQRVSVKRHARLLDYAVHEGCNARAWVAFEVDATADGRQLAACDAATGLDGTLLLTQAAGA
GRRLLSRAQARDLVRSGAQPFELLTPLTLYSAHNDLRFYTWSDEACCLPRGATRAFLRDDTAHRLRLRAG
DLLLLEARTGTTNGLAQDADPLQRHVVRLTRVDPEAGADRTPAPTPRHDPVTGQPLVEVLWAAGDALPFD
LCLSKVIGGTLVQDMACACANIALADHGMSPEHSQPLLPVPGGRVPRMRPADGSLLPATRQGLVRDALGQ
LTLVDAAAPATAALGREPADTREAMQVTSDGDGRTWSARRDLLGSDAQAADFVVETGDDGGVLLRFGDGV
NGRRPGALERLSLRMREGSGSAGNVGNVGAGTIAHVLCGFDGITRVRNPLAASGGAAPLALARARMDAPQ
AFRRQERAVTPEDYATVAMRDPRVQRAVATRRWTGSWHTMFVTVDRRGGEGVDPAFEDSINAFIDRFRLA
GHDVEIDAPAYVALDIALHICARPGYFAADVEQRLLQRFGTAPGGFFDPDRYSFGEPVYLSAVVAAAMAV
PGVAFVKPLRFRRLGHADAGEIGAGRITMARLEIARLDNDPNAPQNGKIAFQVHAMGGTP
>gi|319761737|ref|YP_004125674.1| gpw/gp25 family protein [Alicycliphilus denitrificans BC]
MNTYVAFPYHTDGRGRTGEATRTAWLHGLIEQLLFTVPGERVNRPDFGCGLMQLVFAPNSPELAVTVQAL
VQASLQQWLGHLLRIDAVAASSEDATLTVAVRYTVLETQQAGEASFTRSLSS
>gi|319761738|ref|YP_004125675.1| hypothetical protein Alide_1022 [Alicycliphilus denitrificans BC]
MPGPLLHLGATVLCAHGGQATPSAPVVRVLVSGQPVATQAAPWLVAGCAFSPPQGNGPCITAQWVVAATR
VFAAGQPVLLMSGQGICTPTGTPLIPVAAQTRVLGV
>gi|319761739|ref|YP_004125676.1| hypothetical protein Alide_1023 [Alicycliphilus denitrificans BC]
MNDKFYGKYRGMVLNNIDPMQIGRLQVQVPDVTGLVPGTWAMPCVPVAGMQNGMFALPMIGSGVWIEYEQ
GDPDHPIWVGCFWGSAAEVPALARATPPGVQAFTLQTTLQNGLTISDLPGPTGGIMLKSATGATLVVNDT
GIYIQNGKGASLVMTGPTVNINAGALTVV
>gi|319761740|ref|YP_004125677.1| hypothetical protein Alide_1024 [Alicycliphilus denitrificans BC]
MFAQGIQLTLLVGPIVPLPVPRAVLDALQSVEVRTAAGNASGFQLTFTITARSELNTIFLLAAGTNTGMA
TPPLRVLLVLTMNGSAQPLFDGVMTHVEVQPGGRGQAGTLTVTGEDVTKAMDMQDWSGLPFPAVPVEGRV
ALLCAKYAPFGLIPMVIPVLFPDVQIPIDKIPAQQGTDLAYIQELARQVGYVFYVEPGPAAGTNIAYFGP
EIKVGVPQPALNLDMDALTNVESLSFSFDATKGVLPVVFIQNQFTRAPIPVPIPNLNPLQPPLAALPTPI
ANLKPLKDTAKMSPMRAISAGLAEAATSQDAVSGTGSLDVLRYGHVLKARGLVGVRGAGVVYDGLYYVKS
VTSKIKRGEFKQSFELTRNGLVSITPTVPV
>gi|319761741|ref|YP_004125678.1| hypothetical protein Alide_1025 [Alicycliphilus denitrificans BC]
MADPIAAFLQANGLAQPAFAPDSRYHGLPTAQARLPDGRTVAYVTRRFLPPPESFATVQTVTLAAGQRAD
QLAAQYLGSAEQWWRLADANGAMLPEAMVARPGSVLRITLPEGVPPPAES
>gi|319761742|ref|YP_004125679.1| hypothetical protein Alide_1026 [Alicycliphilus denitrificans BC]
MTISSSPKLTKGGIVLIDPETAQVQRVIALQYNAESLKRELKSQESGGDAGADRAEPTRFKGPAVETISF
EADLDATDQLEFPDQNAAAVAYGIAPQIALLESLSQPSSAQLGKVNSQASSGTLEIAPMLAPLLLLVWGA
GRVIPVKLTSFSVTEEAFDPALNPIHAKASLSLRVLTVDDLGFASKGGSLFMTYLQNREQLAAKAQPASL
STLGVTGV
>gi|319761743|ref|YP_004125680.1| hypothetical protein Alide_1027 [Alicycliphilus denitrificans BC]
MTHERDHKPAADAAVPRRDSRPARGEEAANRLVGKPGDELPASVRQPMQARFDVDFANVRVRSDRAAAEA
ASALGSRAFTIGRHIAFNHGEYKPASPAGQRLLAHELAHVAQQRDADSGRATLRRDAHDEHEANTAADRA
VKGLPAKVGGAPRAGSPHIQADDGKGAGAQDKADDKPAGQAPAGTRITFVMRAPDDAYTQDVTDYVQNTL
GEKVVVVDNIQEAAEYAAKYAKDNKTKVGEIRIIGHGSTTGGIKMTPKGEADRRFVTAQELSDMAADQKV
ASIAKDAMAPGATVEFYGCYVGRSEETGKAVGTIFGGAQFKAIDSTLRTSNERFARRADKDEDGEEVNTR
HGKERVVEVKSSQEIDDRVAKGDKALGKTFDKWLLDRARQMEADGDLPPQKDDAARIAAMREVFDRSGGK
IKRLEIHTDKETLHKSDKRKWVRKWKTTKVN
>gi|319761744|ref|YP_004125681.1| hypothetical protein Alide_1028 [Alicycliphilus denitrificans BC]
MNRIVLHIDRLVLRGIDPADTPALAAALHDALAQQLAAPGAAAVLPSLPAAARLRAGRVTLAADGDAGAH
GQALGQAVARLLMPGVGT
>gi|319761745|ref|YP_004125682.1| hypothetical protein Alide_1029 [Alicycliphilus denitrificans BC]
MIAAYAAAKPVLQRKCACGGKSRCPACEARKRLGTDLGLQPRSAPAQDGAATAEAAQSLVQGTLRGPGQP
LDRATRLAMEPLFGHDFGRVRVHADAQAQASAQAVGALAYTVGQHIVFGPGQRPAAGPLLAHELAHTVQQ
QGTTGSLQRLAIDGADSAMEHEAEAAAQRVAAGRPAQVRLRAGSSRLHRVPVSNEAAGGCGICYDTAYPG
QGPANAGRVAHTVVQAAFLGLGTGMAAARLDEMPFSAPGDENGRLDLVQATPTGLAIGEIKPSTPAGLAQ
GVKDLAYYMEQVQAVYPDRTITPLVAAIRVGNGLTMPDPLAQAAGCAQQKLGVHLMEPGIFGYFCTPPYS
QARSRCPCRKQPPPPVPVPVEKDVKVKERKPARKDSQERAPGGSLVPAFAAALAATATLATLASKLKGLA
KSRLLAAASAVAIVALLAKGAEASIGPGEDPIETLIKSGDATGQPIPDDIKEALRKDDRLRKLLTEAART
GNYDAARREAAEQLTRVVAQNLDAFSDEELQALLQATDGVKGQMPQGEVTVEQIRQRIAARQRGGGAGSG
AGPAAPAGDSGSGSGSGSAATHEEPAAPETAPDAAPPARPQPAQAPAERLVEGMARPAAGGPRFTESARN
KLLEAARAMQPPLTDAEVDELLRRMGPATGKTEDQVVESLRQGMAALRAGKAAQDSPAADPAPASPDATP
PPAADQDSLGDPQVVPADPAKPPTRTDKDVIPIYDEVLAKLEWIQPGNSYLLMNKPPYLSRHSYPMTHFG
RDSQGRLFVGSVMVRIDKQAGNQWTVTLQAGAPLYTTGRRYGTTRTRSATVTAPAAALGTGPAKPAKGAK
P
>gi|319761746|ref|YP_004125683.1| aaa atpase central domain protein [Alicycliphilus denitrificans BC]
MNAPDRVTDWSTANQQLLVAEFARLRALLGEEAPQGAASADAQIALARSRMPAPAAIDTLAALFQLSPFE
RDLLLLAAGVEMDARLAALCAQAGAAQRPWASFGIALAVLPDAHWSALSPDAPLRRWRLLEPDEGAGLVN
ARLKIDERVLHYLAGLNRLDQRLQALLYPVPHDAPPLSATQSAGVQQLLSLWQAVPQTIVLEGDDATGQR
DLACALAEGLGAGLYQLNGMDMPADAAEQAAFAALWGREAALLGAGLLVQCDGAGPERQAAALRLARHLP
GLVLLAANAWPASDLPCHRLRLDPPEAPERRALWLAALEELGTPIAAPALDTLASQYRLGARRIAEITRQ
AHTRNPRGDAAALHHIAREEAGRHAALPALTQTIKPHASWADLVLPAAQQQLLRQIVAHARHRLTVHHAW
GFANQDARGLGLATLFWGDSGTGKTLAAEVMASELSLNLVRVDLSAVVSKYIGETEKNLRRVFDSAEQAG
ALLLFDEADALFGKRTEVKDSHDRYANIEVSYLLQRMEAYCGLAILTSNHKAALDPAFQRRLRFVVHFPF
PDQEQREGIWRAVFPQAAPLAADVDFARLARLDATGGSIRNMALAAAFLAAEAGTAIGMVQLMQAARTEG
AKRERPFSEAELRSWA
>gi|319761747|ref|YP_004125684.1| hypothetical protein Alide_1031 [Alicycliphilus denitrificans BC]
MSTALAIAGVTAVLRDLLNDGLINHDISSVLGSSVTVSVQAPDRVVAANAAEASQLNLFMYLVTPNPGWR
NEGLPGRDGSGRTRLSNPPLALDLHYLLSAYSGADLHAEILLGYAMQLLHETPVLTRAAIRAALVPSPPV
GNTLPPALRALADAGLAEQLELIKITPVMQTNEELSKFWTATQSHLRPSAAYTASVVLIQAQQPARSALP
VLARGPRDAQGRETGIAVQPGLEARLPLLTRAEPPAGQTVAGIGDLVALHGQALDGADRRVRLESDVWQV
ALEIAAEPAQPPDRPVATTAAFSLAGLAAALPVGIYRVTLDATRPDMLNQPRRMSSNRLALTLAPRITNL
PQTVARAGDGSATITLQFTPELRSGQHATLVLGSNEVAPLATGATPSSLQFRIPGAAPGSYLARLRVDGI
ESPIVDMDLSPGDTPHFLNLAVSIT
>gi|319761748|ref|YP_004125685.1| hypothetical protein Alide_1032 [Alicycliphilus denitrificans BC]
MNGLLQRLAARATGSAWTVRSDARLPFAGALSIVQAQAVEPSEPAAAPRPVQASESRAAIEQQAVPSAAE
PAHSARPPAARTRQMATTQDSATTAPRPEQKPASAPHAEADPAGPTGLDDMAHTTETVAAPTTARHVSPA
HAQSPAAYADPAPLLPTGKAPEAIATPHVRAAAAHPDTLRAPHVLPPPWTPSPTQAAPAEPAEVHVHIGR
IEVTAIAQPRPPRHAARERAQPLSLDAYLARRKEPS
>gi|319761749|ref|YP_004125686.1| hypothetical protein Alide_1033 [Alicycliphilus denitrificans BC]
MRVLDAAELLSLWERGTPRHALDRAALLAAAARPDWPADAIADLPLGAIGASLLHLRAANFGPHIDAHAD
CRHCGQRLAFALDVAELLRDAPPEEADGRPMPMAEAAGLRIRAPSLRDLAAVAGLASEDAADALLARCTL
AGQPDAIDAATRAQVDEALEALDPQADLAFALTCVGCGRQDMAQLDTAALLWDEISIRAGALLQEVHRLA
SSYGWSEEQILALSATRRAHYLALVEGES
>gi|319761750|ref|YP_004125687.1| hypothetical protein Alide_1034 [Alicycliphilus denitrificans BC]
MAQFSVNATRFDPYKNFKFRVKWDGKYVAGISKVGALKRSTEPVEHREGGDPSTSRKSPGRTKYEAITLE
RGVTHDTEFEKWANKVWNYGSGLGAEVSLKDFRKDLIIEVYNEAGQLALAYKVFRCWVSEYQALPDLDAN
ANAVAIQHIKLENEGWERDYDVGEPSEPSYTEPA
>gi|319761751|ref|YP_004125688.1| phage tail sheath protein [Alicycliphilus denitrificans BC]
MPSTLSYPGVYVEEISSGVRTITGVATSVTAFVGYTRMGVPDKAVPITSFSDFERAYGGLDRDSPVSYAV
RQFFANGGSQAIVVRVATGYASAAWTLQDSTPAAVLDVAAATPGAWGNGLRITVDHAGARNPDAQFNLVV
SQLQADGVTLRPLETHRNLDMNSASPRYVESVVNNASALVTAKRKGGLVFNRAGYAVSTAVTFPLTATDL
VIAGVVNGATAFKLTLAGPAPGNMADLASAVNTAIGTAGLTAALQASESGADGGAGTGCLKLASLASGES
SSVVISGGAFGGLSGSIQLGLANGGREFTGNAQHRPADASNLVPPVKGVDGARAGATEIVGTPGSKTGMY
ALMDADLFNILSIPETFDMTDLQAAAVIPAAVDLCEKRRAFYIVDAPSGKNLSNIATWANGVTQSRNAAV
YFPAVSLVDPLDELRPRAMAPSGSLAGVYARTDANRGVWKAPAGTDATLNGVLDLASPLNDLENGQINPK
GVNALRNFPAYGRVVWGARTLKGSDAQADEYKYIPVRRLALFLEESLYRGTQWVVFEPNDEPLWAQVRLN
IGAFLQGLFRQGAFQGRSPREAYFVKCDSETTTQNDINLGVLNVIVGFAPLKPAEFVVIQIQQMAGQIQA
>gi|319761752|ref|YP_004125689.1| guanylate kinase [Alicycliphilus denitrificans BC]
MDYPGNLFVVSAPSGAGKSSLVKALLELDSHVQPSVSHTTRAPRGQEKHGREYFFVSEQEFDAMVAANGF
VEWANVHGRRYGTSRKAIEERVALGADVVLEIDYQGALQIKQAFVNAVLIFILPPSWEELRSRLERRGED
AADVIDLRLKNAEEEMAQAGKFDFVIINEVFERALFDLKTIVHAQRLKYAAQRRARADTFESLNIP
>gi|319761753|ref|YP_004125690.1| DNA-directed RNA polymerase, omega subunit [Alicycliphilus denitrificans BC]
MARITVEDCLEQIPNRFQLVLAATYRARMLSQGHAPKIESRNKPAVTALREIAAGKVGLEMLKKVPG
>gi|319761754|ref|YP_004125691.1| rela/spot family protein [Alicycliphilus denitrificans BC]
MNLGSNKATVASAQVQPAAPANPSAAAANAAAASFAALMEKLDYLDSAGIEQVRQAYRYADAAHLGQLRN
SGEPYITHPIAVAALCASWKLDVQALMAALLHDAMEDCGITKADLIDRFGPQVADLVDGLTKLDKLQFNT
REENQAESFRKMLLAMARDVRVILIKLADRTHNMRTLSDMPRSKWGRISSETLEIYAPIAHRLGLNQTYR
ELQDLAFRHLHPWRYATLSKAVTKSRNRRRDIVQKVQTDVDAAFSRLGMAVRLAGREKTLFAIYQKMNLK
HLSFAQVTDLYGFRVIVHSVTDCYTALGVLHQMYKPVPGKFKDHIAIAKLNGYQSLHTTLVGPAGLNIEF
QIRTEEMHIVAEAGVAAHWLYKAQNAEGAAAERLGTKWLQSLLDIQNETRDAAEFWDHVKVDLFPDAVYV
FTPRSQILALPRGATAVDFAYAIHSDVGDRTTAVRINDEQVPLRTELKNGDVVEVITTAGAHPNPAWLAF
VRTGRARSKIRHYLKTLAQNESAGLGEKLLTQALRAEGMEQLPDAQAHAAIWEKLLRFTGNRTRVELMTD
VGLGKRIASIVAKRLVLLLSEGGQRPDALLLTRERYSAHEKVSQGSITLDGSENASVQYASCCRPVPGDA
IVGYLGRGEGLVVHHAQCGVAKKLQHKDGERFIAVDWAEEPTRTFETGITVTVTNGKGVLARVASELADC
EADIVRVDMDDAMGTTDLRFVVAVRDLAHVEAVLRNLRRTHSVLRAFRVLPQPL
>gi|319761755|ref|YP_004125692.1| transcription elongation factor greb [Alicycliphilus denitrificans BC]
MSKAFTKETDAGDDELALPAGIPAGGKNYITPQGYARLRAELLSLIDEERPKVVDIVHWAASNGDRSENG
DYLYGKKRLREIDRRIRFLTKRLEIAEVVDPSVHAGSDQIFFGATVTYVDDEGVERTVTILGVDEADNGL
QQISWISPVARALLKAREGDEVSLQTPAGTRTLEILSVHYPDPQRGEG
>gi|319761756|ref|YP_004125693.1| hypothetical protein Alide_1040 [Alicycliphilus denitrificans BC]
MRASHTPGRTAAWAIALCIFGLCSATCSHAATARPHQEAGAAAHAPAKKSRSTKVKHQQNHSGESTAERD
RRLYRECRGLPNAGACLGYTRR
>gi|319761757|ref|YP_004125694.1| ribosomal protein s15 [Alicycliphilus denitrificans BC]
MVQDARRRPFQPTAQVTQGGRAPPAYKEIHMIAASIKAEVVKANQRAENDTGSPEVQVALLTARINELTP
HFKQHAKDHHGRRGLLRMVSRRRKLLDYLKAKDADRYTALIAKLGLRK
>gi|319761758|ref|YP_004125695.1| polyribonucleotide nucleotidyltransferase [Alicycliphilus denitrificans BC]
MTMFNKVTKTFQWGQHTVTMETGEIARQASGAVLVNIDDTVVLATVVASKNAKPGQDFFPLTVDYIEKTY
AAGKIPGSFFKREAKPSELETLTSRLIDRPIRPLFPEGFYNEVHVVIHTISLNPEVDADIAAMIATSAAL
SVSGIPFNGPIGAARVGYINGEYVLNPGQTARKNSQMDLVVAGTETAVLMVESEALQLPEDVMLGAVVYG
HEQGKIAIDAIHELVRDAGKPVWDWQPEAKDEALIAKVAELGEGTLRAAYQNRNKQLRTQACREAYAAVK
AGLTEQGVEFDAVKVDNMLFDIEARIVRSQILAGEPRIDGRDTRTVRPIEIRTSVLPRTHGSALFTRGET
QALVVSTLGTERDAQRIDALAGEFEDRFLFHYNMPPFATGEVGRMGSTKRREVGHGRLAKRALVACLPSK
EEFPYTIRVVSEITESNGSSSMASVCGGCLSMMDAGVPMKAHVAGIAMGLIKEDNKFAVLTDILGDEDHL
GDMDFKVAGTTAGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQEAMGEAKTEISSFAPKLFTM
KINPEKIRDVIGKGGATIRALTDETGCQINIEEDGTITIAATEAAKADEAKRRIEEITAEVEIGKVYEGP
VTKVLDFGALINLLPGKDGLLHISQIAHERVERVGDYLQEGQIVKVKVLETDDKGRVKLSMKALAERPAG
LPEREPREPREPREPRGERRERRDNGAPEQQ
>gi|319761759|ref|YP_004125696.1| nad(p)h quinone oxidoreductase, pig3 family [Alicycliphilus denitrificans BC]
MKNVMQAVEISAFGPPEGLCLAERPLPQPGAGELLIRVAASGVNRPDVLQRKGHYAPPPGVSDLPGLEVA
GVVESGDAAAMAQAGIRVGDRVCALVAGGGYAAYCVAPVAQCLPVPEGLSDVEAASLPETFFTVWSNVFD
RARLQAGETLLVQGGSSGIGVTAIQLARARGATVIVTAGTDEKCAACLALGAHHAINYKSQDFVAEAQRI
TEGRGVDVVLDMVAGPYVAREVECLAEDGRVVIIAVQGGVKAEFNAALVLRKRLTITGSTLRPRPVAFKA
AIAKALREQVWPLLASGAVKPVIHSTFAAADAAQAHALMESNQHVGKIVLTWTT
>gi|319761760|ref|YP_004125697.1| triosephosphate isomerase [Alicycliphilus denitrificans BC]
MDDMTQKKKLIAGNWKMNGSLQANAALLQALRDGLGEAACAVAVAVPAPYLAQVQGLVAGSAIALAAQDV
SQHESGAFTGEVSAAMLRDFGTRYVLVGHSERRQYHGETDAVVAAKAQRALAAGITPIVCVGETLAEREA
GQTEAVVKRQLAAVVQSNGQCISEIVVAYEPVWAIGTGRTATPEQAQQVHAVLRAQLAAATERADRVSLL
YGGSMNAANAAQLLAQPDIDGGLVGGASLKAADFLQIIAAAHAIQAQAATELGAEKA
>gi|319761761|ref|YP_004125698.1| preprotein translocase, secg subunit [Alicycliphilus denitrificans BC]
MNAVVNVILAIQMLAALGMIGLILIQHGKGADMGAAFGSGSSGSLFGASGSANFLSRTTAVLATIFFVAT
LALAYFGNQRPASSGSVLETPAAAVPAAGASTAVPAPAAEPASGAAQIPTK
>gi|319761762|ref|YP_004125699.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 3 [Alicycliphilus denitrificans BC]
MVSSDEYILQMNLDQYLPVLLFILVGIGVGVVPLLLGYVLGPNRPDPAKNSPYECGFEAFDDARMKFDVR
YYLVAILFILFDLEIAFLFPWAVALQDVGATGFVAVVIFLSILVIGFAYEWKKGALDWE
>gi|319761763|ref|YP_004125700.1| NADH-quinone oxidoreductase, b subunit [Alicycliphilus denitrificans BC]
MIEGVMKEGFVTTSYDAVVNWAKTGSLWPVTFGLACCAVEMMHAAAARYDLARFGAEVFRASPRQSDLMI
VAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRVVPVDVYVPGCPPTAEALI
YGIIQLQQKIRRTHTIARV
>gi|319761764|ref|YP_004125701.1| NADH (or f420h2) dehydrogenase, subunit c [Alicycliphilus denitrificans BC]
MTDIAIHPEKLRDAVAGALGDKLREIRLALGEVTVVVAAEDYLAAMEILRDAPQCRFEQLIDLCGVDYST
YGEVGTDGPRYAVVTHLLSLSLNQRLRVKVFCPDDDFPVIPSVTGIWNGANWFEREAFDLYGIVFDGHND
LRRILTDYGFIGHPFRKDFPLSGHVEMRYDAEQRRVVYEPVTIEPREITPRIIREDNYGGLH
>gi|319761765|ref|YP_004125702.1| NADH dehydrogenase i, d subunit [Alicycliphilus denitrificans BC]
MAEIKNYSLNFGPQHPAAHGVLRLVLELDGEVVQRADPHVGLLHRATEKLAEYKTYIQSLPYMDRLDYVS
MMCNEQAYCLAIEKMLGVEVPLRAKYIRTMFGEITRLLNHLMWLGSNGMDLGASTVLMYTFRERETLFDM
YEAVSGARMHAAYFRPGGVYRDLPDTMAQLKPSKVRNAKALEEFNRNRQGGLLDFIDDFCAKFPGYVDEY
ETLLTDNRIWKQRTVGIGVVSAERALNLSMSGVMLRGSGVAWDLRKKQPYDAYDRVEFDIPVGKNGDCYD
RYLVRVEEMRQSNRIIKQCVDWLRANPGPVIVDNYKIAPPPRERMKTGMEDLIHHFKLFSEGFRVPEGEA
YAAVEHPKGEFGIYLVSDGANKPYRLKIRAPGFAHLAAYDELTRGHMIADAVAVIGTMDIVFGEIDR
>gi|319761766|ref|YP_004125703.1| NADH-quinone oxidoreductase, e subunit [Alicycliphilus denitrificans BC]
MITEATKERFAREVAKYPPEQKQSAVMACLSIVQQEQGWISQESEAAIAEYLGMPQIAVHEVTTFYNMYN
QQPVGKYKLAVCTNLPCQLRGGNQALHHLEAKLGITMGETTQDGLFTLQQCECLGACADAPTMLVNDRHM
CSFMENDKLDQLVDGLRAAEGKQ
>gi|319761767|ref|YP_004125704.1| NADH-quinone oxidoreductase, f subunit [Alicycliphilus denitrificans BC]
MTTAAQVLSQFQATGVQTCFHDRHINPQIYAGLNGSNWSIKDYEARGGYAALRKILGKDGGEGLTQDQVI
ATVKESGLRGRGGAGFPTGLKWSFMPRQFPRQKHLVCNSDEGEPGTCKDRDILMYNPHIVIEGMIIAAYA
MGISLGYNYIHGEIFQVYERFEAALEEARAAGYLGSNIMDSDFSFQLHAHHGFGAYICGEETALLESLEG
KKGQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGQAYLECGKPNNGGTKIFSVSGDVERPGNY
EIPLGTPFAKLLELAGGVRKGRQLKAVIPGGSSAPVLPASIMMECTMDYDSIAKAGSMLGSGAVIVMDDS
RDMVESLMRLSYFYMHESCGQCTPCREGTGWLWRVVHRIQHGQGRVEDIEVLDSVAFNIMGRTICALGDA
AAMPVRAMIKHFRHEFVAKIEAAAKASAA
>gi|319761768|ref|YP_004125705.1| NADH-quinone oxidoreductase, chain g [Alicycliphilus denitrificans BC]
MVEIELDGQKVEVAEGSMVMHAAEKANVYIPHFCYHKKLSIAANCRMCLVDVEKAPKPMPACATPVTQGM
IVRTKSDKALKAQQSVMEFLLINHPLDCPICDQGGECQLQDLAVGYGASASRYGEEKRVVLRKDIGPLIS
TEEMTRCIHCTRCVRFGQEIGGDMELGMVNRGEHSEITTVKGDTVDSELSGNMIDICPVGALTSRPFRYS
ARTWELSRRKSISPHDSTGANLIVQVKNHRVMRVVPLENEAVNECWIADRDRFSYEALNGEDRLTRPMLK
QGGQWQEVDWQTALEYVANGLKCVRDKHGASAIGALVSPHSTLEELYLAGALVRGLGSDNIDHRLRHAEF
AAPEGVRWLGMPIAALSGLQSVLVLGSNLRKDHPLFAQRIRQAARKGCTVHAINAQAYDWALPATHSVVS
HADWAQALADVAAAVAQEKGVAAPAQGQASEEAVAIARALLSGDSKAILLGNAAAHHTQASILLALAQWI
AGQTGAAFGYLTEAANTVGAQFVGAQPRQGGLNAAQMLEGQVKALFLLNTEPAFDSVAGAKVAQGLADVD
MVVTLSPFKTNMEFSDVLLPIAPFTETSGSFVNAEGRVQSFHAVVRPLGETRPAWKVLRVLANIMGLEGV
DFNSSQDVLTHVVGSATQLGAEQLSNATGAAITVARGPAAAPVVASIYQLDGLVRRAPALQQTADARRAR
EEGAAA
>gi|319761769|ref|YP_004125706.1| respiratory-chain NADH dehydrogenase subunit 1 [Alicycliphilus denitrificans BC]
MIDAIYNGGLNLVAASWWTGLAWPVIWNLIKIVCVLAPLMGAVAYLTLWERKLLGFMQVRLGPNRVGPLG
LLQPLADGLKLLTKEVIQPTAASKGLFILGPIMAIMPALAAWVVVPFAPETALANINAGLLLVMAIASIE
VYGVIIAGWASNSKYALLGALRASAQMVSYEIAMGFCFVVVIMVTGSMNLTDIVLGQARGAMAGMGLNFL
SWNWLPLLPVFLVYLISGVAETNRHPFDVVEGEAEIVAGHMVEYSGMGFAIFFLAEYAAMWLVSILAVLM
FLGGWLPPVEALGFIPGWIWLGIKTFVVVSMFIWIRATFPRYRYDQIMRLGWKIFIPVTLVWLLVVGAWL
LSPWNIWK
>gi|319761770|ref|YP_004125707.1| NADH-quinone oxidoreductase, chain i [Alicycliphilus denitrificans BC]
MAAVAAPASFSIKDFFKSFMLWELAKGMVLTGRYAFRGKVTVQFPEEKTPLSPRFRGLHALRRYDNGEER
CIACKLCEAVCPAMAITIESDVRSDGTRRTTRYDIDLTKCIFCGFCEESCPVDSIVETQILEYHGEKRGD
LYFTKEMLLAVGDRYEPEIAAAKAADAKYR
>gi|319761771|ref|YP_004125708.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Alicycliphilus denitrificans BC]
MDVKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAGVWLLLKAEFLAITLVLVYLGAVMVLF
LFVVMMLDIRFDTVRRGFWKHFPLAAFIGALVAFEMAAVLMTGFRGVEEPKAVPALVNAAGQVLPYSNTQ
ALGRLMYTEYLYPVEIAAVILLVAMISAIALTLRQRKDVKAGDATAQLRARASDRLVVLKMPTTQAPQPP
ADDDAGAQEKKA
>gi|319761772|ref|YP_004125709.1| NADH-ubiquinone oxidoreductase chain 4l [Alicycliphilus denitrificans BC]
MTLTLGHFLSLGAMLFALAVVGIFLNRKNLIVLLMAIELMLLAVNINFVAFSYYLGDMHGQVFVFFILTV
AAAEAAIGLAILVLLFRNKTSINAEDLNTLKG
>gi|319761773|ref|YP_004125710.1| proton-translocating NADH-quinone oxidoreductase, chain l [Alicycliphilus denitrificans BC]
MLLAVPLAPLAGSALAGIFGTAFGGNWLGRRASHSLTILGVLVSFVLSALTLSSVVLDGARFNETIYTWM
VVGGLRMEVGFLIDSLTAMMMCVVTFVSLMVHIYTIGYMEEDDGYNRFFSYISLFTFSMLMLVMSNNMLQ
LFFGWEAVGLVSYLLIGFWFNKQSAIFANLKAFLVNRVGDFGFILGIGLIAAYAGSFNYGEIFAKRQELG
GLLLPGTDWQLITVACICLFIGAMGKSAQVPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVSRMSPLF
EMSDTALNFVLVIGAITALFMGFLGIIQNDIKRVIAYSTLSQLGYMTVALGVSAYSVAVFHLMTHAFFKA
LLFLGAGSVIMGVHHNQDIRWMGGLRKYMPITWITSLLGSLALIGTPLFSGFYSKENIIEAARFSQLPAA
GFAHFAVLAGVFVTAFYSFRMYFLVFHGKERYDQNPDTHHDEHDEPDPHHHHADHSKPHESPWVVTVPLV
LLAIPSVVIGFMYIQPMLFGDFFKDVIFVDAARHGAMAELAHEFHGPVAMAVHALQTAPFWLALAGVALS
YYMYIVNPALPAAIKRGLQPIYALLENKYYMDWINENIIAAGTRCLGVALWKGGDQGVIDGAIVNGSWKL
VARISAVVRRVQSGFLYHYALFMILGVFALMTYFVWLNK
>gi|319761774|ref|YP_004125711.1| proton-translocating NADH-quinone oxidoreductase, chain m [Alicycliphilus denitrificans BC]
MGLLSLAIWTPIVFGVLLLAFGSDRHAGAVRWLALIGALLGLAVTIPLIGGFDTGTAAMQFVEKAPWVAR
FNMYYHLGVDGISMWFVPLTAFITVIVVIASWESITERVYQYMAAFLILSGLMIGVFSALDGMLFYVFFE
ATLIPMYLIIGMWGGPNKIYAAFKFFLYTLLGSLLTLVAFIYLYNQSGGSFDIAAWHRLPLGSTAQTLLF
FALFAAFAVKVPMWPVHTWLPDVHVEAPTGGSAVLAAIMLKLGAYGFLRFSLPIAPDAAHEWAWLMITLS
LIAVIYVGLVAIVQKDMKKLVAYSSVAHMGFVTLGFFIFNDLGVSGGLAQMIAHGFVSGAMFLCIGVLYD
RVHSRQIADYGGVVNTMPKFAAFALLFSMANCGLPATAGFIGEWMVIIASVRFNFWIGLGAALALILGAS
YSLWMYKRVYLGPVVNDNVRGMSDINAREFLVLGVLAIAVLYMGIYPKPFTDVMDASVTELLRHVAQSKL
N
>gi|319761775|ref|YP_004125712.1| proton-translocating NADH-quinone oxidoreductase, chain n [Alicycliphilus denitrificans BC]
MMIDNISWLAIYPEIVLLVMACVIALVDLGVSSARRTGTYVLTMLTLAVVAILQAMYASSGNTFYGWSNM
VVSDAMGNWLKCFATVSLMVTLVYGRPYAADRDMLRGGELFTLTMLALLGICVLISANNFLVIYLGLELL
TLSSYALVALRRDHTTTTEAAMKYFVLGAMASGFLLYGLSMVYGATGSLDIGQVFKAINTGQIRHQVLVF
GVVFIVAGLAFKFGAVPFHMWIPDVYQGAPTVVTLIIGSAPKFAAFGMAIRLLVDGLLPLAIDWQQMLAV
LAIASLLVGNVAGVLQTNLKRMLAYSTISHMGFLFLGLLSGVVNGTVDSNAAEAAYSSAMFYIVTYVLTV
LPAFGLIAMLAREGFESEEIADLAGLNQRSPLYAGVMAVCMFSLAGIPPLVGFYAKLSVLQALVASGHGL
HVALAVFAVLMSLIGAFYYLRVVKVMYFDTPLTATTVSAPLDARVVLTVNGALVLILGLVPGGLMALCAD
AIVRALAT
>gi|319761776|ref|YP_004125713.1| transmembrane protein [Alicycliphilus denitrificans BC]
MTQTAAIWLVIVAALVAANLPFVNDRWLIVGKQAPGGKPFLARALELLLLYFAVGALARLIEQRAGQAAP
QGWEFYAVTAALFITLAFPGFVYRYLMRRGGRRGH
>gi|319761777|ref|YP_004125714.1| hypothetical protein Alide_1061 [Alicycliphilus denitrificans BC]
MKVLDLFCVHQHVFEGWFASEEDFQQQQSRGLVQCPMCGSTDIRKGLSAPRLNLRASPDAPAPAQVAARP
APASREDALQALQTVWLHAARQIMARTEDVGGRFAAEARRMHYGEIEERAIRGQATPQETAELLDEGIVV
LPLPIPEAAKETLQ
>gi|319761778|ref|YP_004125715.1| hypothetical protein Alide_1062 [Alicycliphilus denitrificans BC]
MGLHFLSFDYSEDSEGTATWDAVASVPTARLPELQREIVALLAWAHSEFGAVRGPVEDGGLWDYDLQFER
DRHPLQALGYDVDARQLQPAPHALPGERVTLTLSLSGGLSFGEAFAARFGDP
>gi|319761779|ref|YP_004125716.1| glutamate dehydrogenase (nadp(+)) [Alicycliphilus denitrificans BC]
MHEDIRFWHNLLLHCHITFSIESFFMKYASVGQFLEYVAQRNPGQPEFLQAVTEVMESLWPFIEKHPKYA
ENSLLERLVEPERIIQFRVSWQDDHGTVHVNRGFRIQHSMAIGPYKGGLRFHPSVNLSVLKFLAFEQTFK
NALTTLPMGGGKGGSDFDPKGKSPSEVMRFCQAFVTELFRHVGPDTDVPAGDIGVGGREVGFMAGMYKKL
ANNSGSVFTGKGLSFGGSLIRPEATGYGCVYFAQEMLKTRGRSFDGLRVSVSGSGNVAQYSVEKAMELGA
KVITVSDSSGTIIDEEGFTPEKLAILMDVKNHHYGRVSDYAERTGVKFQAGMRPWHVPVDVALPSATQNE
LDENDARTLIKNGVLCVAEGANMPSTIEAAKAFEEAGVLYAPGKASNAGGVATSGLEMSQNAIRLSWSRD
EVDARLLMIMQGIHAACVEYGKRADGSVSYINGANVAGFVKVADAMLAQGVI
>gi|319761780|ref|YP_004125717.1| DNA mismatch repair protein mutl [Alicycliphilus denitrificans BC]
MGGTYNRRVTAPPPDSATPSVPAPRRPIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGATQVTVR
LLAGGVRLIAVEDDGMGIPRDELPIALRRHATSKIGNLHDLESVATMGFRGEALAAIASVSEMALLSRTA
QQASAFMLDARSGELRPAARSQGTTVEVKELFFSTPARRKFLKTDATELAHCVEAVRRHALARPDVGFAI
WHEGKLVEQWRATLAHGEPADAQALERRLADVLGEDFIRESVPVHLRSGAITVTGRAGLPDAARSRADQQ
FCYVNGRFVRDKVLTHAARSAYEDVLHGQKQPVYALYVQMDPQRVDVNVHPTKIEVRFRDSREVHQAVRH
AVENALAAPRAQALASVPVAAAAAPASDSGRKQFQLPIWQAQAAIRFEERAGHKVSDLQALWGTPAAAPQ
PAMPAAATPPAAIEAPPLPAAAAAAAAAAAAAAASVPAAPTESAWPLGRAVAQIHGVYILAESAQGLVVV
DMHAAHERIVYERLKAQVDQGARLASQPLLIPATFAATPEEVATAESHADTLALLGLEIVPFSPRTLAVR
AVPNTLAQGNPVELARSVLAELGQHDASTVVQRARNEILATMACHGAVRANRKLTIDEMNALLRQMEVTE
RSDQCNHGRPTWRQLTVKELDALFLRGR
>gi|319761781|ref|YP_004125718.1| 17 kda surface antigen [Alicycliphilus denitrificans BC]
MTPQRTPTLRALTVATALAGALALGGCAHRPTNAQVGTGVGAVAGGLVGNAVFGSTLGTVGGAAAGALIG
NEVGKNNDRGYRRR
>gi|319761782|ref|YP_004125719.1| snare associated golgi protein-like protein [Alicycliphilus denitrificans BC]
MDIIAFLIDFILHVDKHLEAFVASYGAWVYALLFIIVFVETGVVVMPFLPGDSLLFIVGALCGAGLLNFP
LACALLLAAAVLGDQCNYQIGRYFGPKVFQWEGSRWFNKKAFDQAHAFYERYGGITIVLARFMPFIRTFA
PFVAGVAAMGRAKFTAYNVAGALIWVLGIATAGYFFGNLPWVRQHLEKIIWGLILVPGLIAIFGAWRAGR
KQQAA
>gi|319761783|ref|YP_004125720.1| guanine deaminase [Alicycliphilus denitrificans BC]
MTLQAYRAQLLRFDADGQPLYDSDGLLVTGPGADGVRRVVDAGAHGAVAAHHPGVPVERLPGRLIAPGFI
DMHVHYPQTDIIGSPAEGLLPWLENYTFPAEARFADPTHAAEVARFFFDELARNGVTTALAFATSHPASV
DAFFSQARQRGLRMIGGKVLQDRHSPDGVRDQTEQSLLDTEALITRWHGKGRLGYAITPRFAPSCSDAQL
RGAGELARRHPGTWIQSHVAENKDEVRWVRELYPQARSYLDVYRRFGLLRSRAVYAHCIYLDDTDRALMR
ETGTAAAVSPTSNLFLGSGFFDYGSAARTGMLHGLASDVGGGTSFCPFHTMLAAYYVGREGQSKPGLSLA
PSQLWWRHTGGAARALGLDGVIGTLQPGTEADFVVLDPQATPLLARKTAQANGLEELLFALIVLGDDRVV
ERTVTA
>gi|319761784|ref|YP_004125721.1| xanthine/uracil/vitamin c permease [Alicycliphilus denitrificans BC]
MNAKDLSGVPATPQQAASAGLAERLFKLREHGTTMRTELIAGLTTFLTMAYIIFVNPSILGDAGMPKDAV
FVATCLIAALGSAIMGLYANYPIAMAPGMGLNAYFAYAVVLHMGFTWQAALGAVFISGCLFLVVTLFGLR
GLIIKGIPQSLRNAITVGIGLFLALIALKSAGIVVGDKATLVTLGDLHSAPVILAVLGFIAIVALDKARV
PGAILIGIVGVTVASFFFGGNQFRGLFSAPPSIAPTFLQLDIHTALTKGFLNVVLVFFLVELFDATGTLM
GVAKRAGLLVPGRMERLNKSLLADSSAIFAGALLGTSSTTAYVESAAGVQAGGRTGMTALTVSVLFLACL
FIAPLAGVVPAYATAPALFFVACLMLRELTELDWDDSTEIVPAAVTALMMPFTYSIANGLAFGFITYAAV
KLFTGRVREVHPMVWIIAGVFLFKFFYIGGH
>gi|319761785|ref|YP_004125722.1| regulatory protein lysr [Alicycliphilus denitrificans BC]
MKPHAAPPHAPAGASAPAGAPSERNLFDRIDLHLIRVLHQVLTERSVSRAALRLGMHQPAVSTALKRLRE
LAGDPLLVRNGAHMVPTEAGQRMLEPAANVLRAAEMLFTEARSFDARTSCQTFRIAASDYLDPLFLPRLV
ADIQRQAPLARVEIHALTREGDYRAQLALGEIDLVIGNWLQPPDDLHMARLFSDEVVSLVSRHHPAVRRG
WDEAGWLAAEHIAPMPTHPGARGIIDQMLDGLGLQRHIAVRSAYFSLIPDMVAGTRLVLTTGRRYCERVA
SRLPLAILPCPIAMPPLLYYQLWHARSQHSSAARWLRERTREAIAGLQQQAAPPSPH
>gi|319761786|ref|YP_004125723.1| xanthine dehydrogenase, molybdopterin binding subunit [Alicycliphilus denitrificans BC]
MNKPVPGHVLNHPAAFAPYQDNQRLRLDPGAEARAHQAGARVGISQAHESAVLHVSGSATYTDDIPELAG
TLHCALGLAPVAAGRLLGMDLDTVRAMPGVVRVFTAADIPGANDWGSIVHDDPILCDGEIRYLGQPVFAV
VARTREQARRAAALARQALRVEAAPPVLTPREAHARGQYVVPPMHLVRSSSGLDEAGIRARIAAAPHRLQ
GSLDVGGQEQFYLEGQISYAIPKEGNAMHVHCSTQHPSEMQHLVAHALGVHAHAVQVECRRMGGGFGGKE
SQSALFACMASVAARLLARPVKLRVDRDDDFLITGRRHCFWYEYDVGYDDAGRILGAAVTMVSRAGHSAD
LSAPVMTRALCHFDNAYWLPEVAMHGFCGKTNTQSNTAFRGFGGPQGAIAIEYILDGIARALGHDPLAVR
RANFYGRGERNVTPYLQTVRDNVIHELVDQLEERSGYQARRTAVAAFNATSPVLKRGLALTPVKFGISFN
VKHFNQAGALVHVYTDGSILVNHGGTEMGQGLNTKVAQVVAHELGVAFERVRVTATDTSKVANTSAPAAS
TGSDLNGKAAQDAARQIRARLAACAAARHGGSSEDVRFANDQVWAGGRQLSFDALVGEAYLDRVQLWSDG
FYATPGLSWDKDRMQGNPFYYFAYGAACSEVVVDTLTGEWKLLRADVLHDVGRSLNPAVDIGQVEGAFIQ
GMGWLTMEELVWHPTSGLLLTHAPSTYKIPTANDCPPEFNVQLFEGENAEDSIHRSKAVGEPPLLLPFSV
FFAIRDAVAAAGGHRVAPPLQAPATSEAILRAITAVQAP
>gi|319761787|ref|YP_004125724.1| xanthine dehydrogenase, small subunit [Alicycliphilus denitrificans BC]
MTHATPSSADARPIRFYHRGAVVSIQGMHTTRTVLDWLREDVRCTGTKEGCNEGDCGACTVVLGELDANG
QLQLASVNACIQFLPTLDGKALFTVEDLQAMTPAQSCCGGAAQPLHPVQQALVECHGSQCGFCTPGFAMS
LWNTYEQHRQAGTRPTRQQLADDLSGNLCRCTGYRPILDAGQRMFDLPAAAFDRAAVARALQALAQEPAL
AYGAAHHTVSERTDHFHAPRTLEDLARLRLEQPQARLLAGSTDIGLWVNKQFRDVGDLIYLGGVRELRAV
EERDGALWIGAGATLEQAWAALAARAPALTDVWLRFASTPIRHAGTMGGNVANGSPIGDSAPILMALDAQ
VELRRGAAVRRLPLPDFYLDYMKNALQEGEFVQAIVVPLAAFARQVRGYKISKRFDCDISALCAGMAIAL
DGETVASVRLAYGGMAATVQRAARAESALLGQPWTEDSMRAAQQALAQDFQPLTDMRASSAYRLQVAQNL
LQRLWLETRPQGPLDAGRTSVFSVLPHGV
>gi|319761788|ref|YP_004125725.1| cupin 2 conserved barrel domain protein [Alicycliphilus denitrificans BC]
MALPHVAPGEITRLEPLGERLTDTVSTALFKAAQLEVVRLVLPRGHTMREHRVQCEITLQCMEGALDLTV
DGRTQRMQAGDLVYLAAGQPHALAAVQDTSLLLTICLLPAA
>gi|319761789|ref|YP_004125726.1| cell wall hydrolase/autolysin [Alicycliphilus denitrificans BC]
MSDAPLPHPLHTRRTLLQAGSLVLLLGRQQIARGATIVAVRVWPAPEYSRVTIESDRQLVAKQFFVPTPP
RLAVDIEGLDLDPSLRELVAKVRPDDPNIAGIRVGQYAPGVVRLVVDLKQAARPQVFTLQPVAAYQHRLV
FDLYPAVPPDPLEALIAERLRDAGSSAGAPQPAAPDIAKAPAPDPLDELIAQHSLKPGMPTPPAPGNAPA
PAAPPRTRGAAPATARATDRLIIVALDPGHGGEDPGAIGPGGTREKDVVLKVAHQLRDRINATQVGGNPM
RAFLTRDGDYFVPLGTRVEKARRVQADLFVSIHADAFTTPSARGASVFALSQSGASSSAARWLANKENEA
DLIGGVNVGSQDRHVQRALLDMSTTAQINDSLKLGSVLLGEIGGMARLHKPRVEQAGFAVLKAPDIPSVL
VETAFISNPEEEAKLRSAAYQEQLADALMRGIIRYFAKNPPLARSRSV
>gi|319761790|ref|YP_004125727.1| uncharacterized protein family upf0079, atpase [Alicycliphilus denitrificans BC]
MTAAHHQHPIVETPRRLSLRWQDEDDTARFAARLAAQPGLANAFIALHGDLGAGKTTLVRHLLRALGVAG
RIKSPTYAVVEPHQAPGLFIWHFDFYRFHDPREWEDAGFRDIFASPGLKLAEWPDNAGSLAPPADIALYI
EAEDDLARHVTLQAHTPLGSAILQGLDTP
>gi|319761791|ref|YP_004125728.1| auxin efflux carrier [Alicycliphilus denitrificans BC]
MLRAVNYAQLLFPDFSLILCGYLICRYTPLNRSVWQPVESLVYYLLFPVLLFQSIVKSPIDVGEAASLVA
AGLGTGLCGVALAYSLPHLPWLGRHIDRRDHAAAAQVAFRFNSFIVLALADRLAGAQGLLMVAVLIGVCV
PVLNVAAVWPMARGSQQGFVRELLRNPLIIATVTGLVANLLGFRIPPWLEPSVSRIGAASLALGLMAAGA
GMQFGLLTRSKLLSASVLFIRHLAQPLIAWAFARLLRLDATQTTVLMAFCAVSTASSCYVLAARMGYNGA
YVAGLVTLSTVLGVASLTFALGMLR
>gi|319761792|ref|YP_004125729.1| hypothetical protein Alide_1077 [Alicycliphilus denitrificans BC]
MQRRNCLALALLAATAGTAFAQAYPNKPVKLLVPFAAGGTTDIIARVIADPLSRALGQSVVVENRGGGGG
IIGAQETARATPDGYNLGIATVSTTAANPAINTKVPYNPLTDFTPIINIAATPNIIAVHPSFPAKDYKSF
LAELQKNPGKYSYASSGTGGIGHLLMELYKSLSNTFVTHIPYRGAGPALNDTVAGQVPIIFDNLPSALPF
IKSGKLVPIVVSAPQRVAALPNVPTFKEVGLEPVNRMAYYGILGPKGLPKDVVDKISAGTKKALEDPAVR
KRIEDTDSIIVANTPEQFAEQIKAEFEIYKQVVQKQKLTLE
>gi|319761793|ref|YP_004125730.1| tyrosine recombinase xerd [Alicycliphilus denitrificans BC]
MLPESQNAIDSFLDALWLEDGLSRNTLAAYRRDLSLYAGWLAAQQPPLALDATAEHHLSGYFAARHAQTR
ATSANRRLTVLRRYFHWALRERRIAQDPTVRLLAARQPLRVPKTLTQAQVEALLHAPDTATALGLRDRTM
LELMYASGLRVSELVTLKTFQLGLTEGVLRITGKGGKERLVPFGEEARRWLERYLAEGRGAILAGRQTDD
LFVTQRGSAMSRVMFWVIVKKCAQLAGITAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTTIY
THVARERLKQLHAQHHPRG
>gi|319761794|ref|YP_004125731.1| pas sensor protein [Alicycliphilus denitrificans BC]
MRISLPVTASEFTFDERDTLVSVTDTSGSITYCNHAFIHVSGYAREELLGQPHNMIRHPDMPAEAFRDMW
ETIASGRPWTGLVKNRRKNGDFYWVQANVTPMREGDRITGLLSVRTQPMHEQVQAVQALYATMRAQAEAG
QQFVRTGSCALPAPDADPATLADDVSAPLPSVVNAMKHDLTLLRRGEMLAVHCLAGRVPAAVRGHDPAQD
HLTQERKPMTINTTLNKVAASVPECLAAGYVDTASGMLLAIKTVDSHPREVIDLVAAATADLFNGPNVPL
IERMFKKSRGLQDNDDHHYFQEIIVNSDNLIHVCLRGKTQPDYVAVFVCRRTANLGMALTKARIAMPELE
AAL
>gi|319761795|ref|YP_004125732.1| hypothetical protein Alide_1080 [Alicycliphilus denitrificans BC]
MTDSLRRRLLAALPLTLLPWAASAQPAAPWPARPIRMVVAYPAGGVSDVVARALGEKLAQRLGTPVVVEN
KAGAGGTIGMDAVAKAAPDGYTLGFSAISPLVLNPHLGKSPFDPERDIAPVASVMYSPVLLLGTQALQAR
DFQGLLAGARAHPGQVRWATSGLASLGHIMLEHIMQGAGVQITHVPYKGGGQQLNDALSGQFEVLSTNAG
PAVMQHIQAGKLHPLAVGAPRRLESLPDVPTLQELKLPAANLNSVFGIFAPAGTPAPILERLNAEINRAL
AQPDVKVRLEASDNVPTGGTAAQFQRQIAAESESNARIIRAAGIRLN
>gi|319761796|ref|YP_004125733.1| eal domain protein [Alicycliphilus denitrificans BC]
MSSTADPDSSLSTVPQSGPVDADNLVIIARQAILDEQRAVYGYELFDRNTAADSHTAASDASLLFNALSY
AGSEALIGKTIVFVNCTHESLAGGHLELIHPDKVVLEVPTLAAGATPEQIEQMLPTLQSLRTRGFRLAFS
QDVLRRAYMGWLPLASFIKLDMQAFKPELAEPLVKFARANSQATLIAEKVETAEQHERMAALGVKLFQGY
WFARPALVKAQTIRPSQATIIQLINLVRQQAGTAEIEDLLKKDPTLSFNLLRFINSSGFGLSCEITSFRH
AVMILGLKKMFRWAALLLTTSRKDGAPPAVGQTAVVRGRLMELLAAELLPPEECDNAFVVGVFSLLDTML
GIPMKRALESVALPEPVLDALLRNQGVFAPFLELTRACESGDDEAFARTAEALHLSNRQVNWAHLQALAW
ADSMTAEA
>gi|319761797|ref|YP_004125734.1| eal domain protein [Alicycliphilus denitrificans BC]
MPSTPSAPHALGPSAPAPGAGAMIARQAIMDDRQAVVGYELFNRSRTQTGHTAASDVLLVFTALSHAGSE
ELVGRMLIFVNCTHESLAGGHLELVNPDKVVLEIPPLGHVAAQEVQARLPILAGLRARGFHLAFGHQVLE
SAYAPWLPLADYIKLDMAVLAPDQLAVLVSYAGRHSQARLIAEKIETAQQYDMVSSLGVRLFQGYLFSRP
TLVEARLLSPSQASIVQLLNLVRSQAPTSEIEEALKKDAGLAFNLMRLINSAGLGLTREITSFRQAVLLL
GLKKLFRWAALLLTVARSGGTPPAVGQTAVVRGRLMELLAREFMSPEQADQAFVIGVFSMLDQMLGMPLE
PALSLLHLPDELAAALLRRDNAYGQLLTLAEACESSDDCRFDQAAQSLRLSSQQINLAHLQALAWADQMT
QG
>gi|319761798|ref|YP_004125735.1| hypothetical protein Alide_1083 [Alicycliphilus denitrificans BC]
MELRQRALQVLCLPDPEEKSAAALDMQAREASFSIASHTPVPPPDAYALPGRPARPELLHHQAVARRSPA
TPQGRAALIHAIAHIEFNAINLALDAIWRFPAMPDRFYLDWLRVAAEEARHFRLLRDHMREHLGHDYGDF
PAHQGLWSMCEKTAHDVVARMALVPRTLEARGLDATPLIQHKLRSVGTPDALAAVGILDIILAEEVGHVA
IGNHWYAWLCARQGLDPVAHYALLAERYEAPRPKPPINAAARRAAGFSEAELLWLQHG
>gi|319761799|ref|YP_004125736.1| transferase hexapeptide protein [Alicycliphilus denitrificans BC]
MAIYELDGVAPQVAASAWVADSAEVMGNVVLAEDASVWFGTVVRGDCESIRIGAGSNVQDASVLHADVGQ
PLVVGDRVTVGHKVMLHGCTIGDESLIGIGAVVLNGARIGKNCLVGAGALVTEGKEFPDGSMILGSPARV
VRQLSPEQIEGLRRSAQHYMENARRFKAGLRKLD
>gi|319761800|ref|YP_004125737.1| hsp33 protein [Alicycliphilus denitrificans BC]
MSELHKFLFDGLPVRGMIVRLTGAWTELLARRAGNTETGAYPAPVSELLGEMAAAAVLMQSNIKFNGALV
LQIFGDGPVKLAVAEVRSDLSLRATASVSGELPAHAGMADLVNAGGGGRCAITLDPQDRLPGQQPYQGVV
PLHGDRKEKLHRLSDVLQHYMLQSEQLDTTLVLAANDEVAAGLLIQRMPAKGEGNLAGAAGRGDEDQIGL
NEDYNRIATLAASLTRDELLSLDVETILRRLFWEERLLRFVPQRGESGPRFACSCSRERVGNMLRSLGID
EVQGILDERGSIEVGCEYCGQQYHFDAVDAAQLFTAPGQQPPVSSSVQ
>gi|319761801|ref|YP_004125738.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC]
MQKKIAALALVGLAGAACAADLRVGLNPAYEPFESKTASGEIVGFDVDIANALCEQIKRKCVFVESEWDS
IIPGLQAKKFDVVISSMSITPERARVVDFTNRYYKTPSAIVVKKSVKYEGPASLKGMKIGVLKSSTQEKW
ALGELKPAGVTVVPYQSQNQVYLDIQAGRLDGTVADKVEVNGGFLRKPEGKDYGYVGPDQYDAKYYGEGI
GIALRKGQGDLKKQLNEAIDTIRANGTYARIAKKYFDFDPYGK
>gi|319761802|ref|YP_004125739.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MRDYYLAILNGSLLTVGVSLASLAVATLLGLAGAAAKLSGRRPLVWLAQLYTTVVRGIPELLMMLLVFYG
GAIGLNSLAELWGNQEGVDLDPFVAGVLTIGFIYGAYMTETFRGAILAIPRGQMEAAWAFGMGRLRTFVR
ITLPQMVRYALPSFTNNWLVLIKATALVSLIGLHDMTYLAKQSSAAAREPFAFFLFTAAIYLAYTSLSLW
ALRAVSRRYSLGTDRVQLL
>gi|319761803|ref|YP_004125740.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MNWLVIFEPDTLALYGEGLLVTLQLTLYSLGLGAVLALACALALVGSNAWLRWPAQAFTYFMRGTPLLIQ
VYLIYYGVAQLEWVQARWDDVWPWTNFKEPFFCALLSFSLNTAAYTAETLAGSIRETSKGEVEAARAMGM
GPWMLMRRIVLPSAIRRMLPAYGNEVVMMLHSSSLASTVPALTDLTGAASRVYADFYLPFEAYLFAAAIY
LCITLCLIGATRLVERRFLGYLAPRKA
>gi|319761804|ref|YP_004125741.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MNRNTPVKLQALDIHKRYGANEVLKGVSLTAHAGDVISIIGSSGSGKSTLLRCINLLERPQQGRILVAGE
ELRLRPAQDGALEAADQKQLQRLRTRLAMVFQHFNLWAHMTALANIIEVPVHVLGLPRDEAVERARKYLR
LVGLEGREDAYPNHMSGGQQQRVAIARALAVEPEVMLFDEPTSALDPELVGEVLRVMQVLAQEGRTMLVV
THEMGFAREVSNHVIFLHQGLVEEQGDPREVMANPRSERLARFLSGNLK
>gi|319761805|ref|YP_004125742.1| septum formation initiator [Alicycliphilus denitrificans BC]
MVTRIVPLVLLLLLVAIHAQLWAGRGSVGNVQDLRQQIAAQQAANAQARLANERLAAEVNDLKGGLEMVE
EKARGELGMVKQGEIYVQVVRPAQR
>gi|319761806|ref|YP_004125743.1| enolase [Alicycliphilus denitrificans BC]
MSAIVDIVGREVLDSRGNPTVECDVLLESGVMGRAAVPSGASTGSREAIELRDGDKGRYLGKGVLKAVEH
INTEISEAVLGLDASEQAFLDKTLIDLDGTDNKSRLGANAMLAVSMAVARAAAEEAGLPLYRYFGGMNGC
QLPVPMMNVINGGAHANNTLDLQEFMIIPVGAPSFREALRWGAEVFHALKKIINDRGMSTAVGDEGGFAP
SVENHEAAIQLILEAIDKAGYTAGEQIVLGLDCAASEFYKDGKYVLEGEGGIQLTAQQWTDMLAAWVDKY
PIISIEDGMAEGDWDGWKLLTERLGKNVQLVGDDLFVTNTKILKEGIDKNIANSILIKINQIGTLTETFA
AIEMAKRAGYTAVISHRSGETEDSTIADIAVGLNAGQIKTGSLSRSDRIAKYNQLLRIEEDLGDVAEYPG
RAAFYNLR
>gi|319761807|ref|YP_004125744.1| hypothetical protein Alide_1092 [Alicycliphilus denitrificans BC]
MASGYIIASVTVTDPAQYEEYKKWSSEAMRAHGAEVCVRGGKVEVLEGDWNPGRTVVLKFPSFEAARAFH
DSAEYRKARAAREGAAVMRMVVVEGL
>gi|319761808|ref|YP_004125745.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Alicycliphilus denitrificans BC]
MQLCGFDIGLDRPFFLIAGPCVVESEQLQMDVAGRLQEITASLGIPFIFKSSYDKANRSSGASFRGPGME
KGLEILAKVKKQLGVPVLTDVHTEAEIPAVAQVVDVLQTPAFLCRQTDFIRAVAQSGKPVNIKKGQFLAP
HDMKNVIDKARAAAREAGLSEDRFMACERGASFGYNNLVSDMRSLAIMRETGAPVVFDATHSVQLPGGQG
TSSGGMREMVPVLSRAAVAVGVAGLFMETHPDPASALSDGPNAVPLKHMRALLETLVQLDAVTKKNGFLE
NDFGA
>gi|319761809|ref|YP_004125746.1| ctp synthase [Alicycliphilus denitrificans BC]
MTKFVFVTGGVVSSLGKGIASASLAAILESRGLKVTLIKLDPYINVDPGTMSPFQHGEVFVTDDGAETDL
DLGHYERFIETRMKQANNFTTGRIYQSVLEKERRGDYLGKTVQVIPHVTNEIQEFIKRGAGIGTPDAVDV
AICEVGGTVGDIESLPFLEAVRQLSLKLGPNNSAFVHLTYLPWIATAGELKTKPTQHTVQKLREIGIQPD
ALLCRAHHAVPEEEREKISLFTNVAEWGVISMWDVDTIYKVPRMLHEQGLDGLICDKLRLNTPPANLKRW
DALVHETEHPQGEVQIAMVGKYVELSDAYKSVNEALKHAGMQSHVRVKITHVDSETITDANAADKLGQYD
AILVPGGFGSRGVEGKISTARYARERKVPYLGICLGMQVATIEYARHMAGLEGANSTEFDPHCKHPVIAL
ITEWKDEDGTIKTRDANSDLGGTMRLGAQSSDVQPGTLAHSIYGSVVTERHRHRYEANTQYLDKLRAAGL
VISALTQREHLTEIVELPREVHPWFIGVQFHPEFKSTPWNGHPLFNAFVKAAVEHQKKA
>gi|319761810|ref|YP_004125747.1| phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase [Alicycliphilus denitrificans BC]
MNALVGKHIVLGLSGGVACYKSAELTRLLVKAGATVQVVMTEAAEQFITPVTMQALSGRPVYTSQWDARE
ANNMPHINLSREADAILIAPCSADFAARLVQGRADELLSLLCLARPVDRVPLLVAPAMNREMWAHPATRR
NLAQLAQDGAAVLGVGNGDQACGETGDGRMLEPAEILEDLAAFFAPKLLAGQRVLITAGPTFEAMDPVRG
ITNLSSGKMGFAIARAAREAGAEVTLVAGPVHLPTPRGVRRIDVRSAQNMLEAVEGQVPGATVFIATAAV
ADWRPASSAEHKIKKDGSGQVPALAFVENPDILATVARSERARSGSLYCVGFAAESENLLEHASAKRARK
GVPLLVGNIGPATFGQDDNALLLVDAQGHQELPRAPKAELGRQLVAEIARRLGVAAAP
>gi|319761811|ref|YP_004125748.1| hypothetical protein Alide_1096 [Alicycliphilus denitrificans BC]
MNGPNLGPGGPEGPPDGDYARYVERLMQRADQQRGAAQAAAKAGDARAAPAPAQAASAPSAAAIAGGQPA
GKARGRAAARQLPAKWPLLLWILFVLLMWFAPSLLPFVVVGLVLAGVGYSLWKARRKSGGERR
>gi|319761812|ref|YP_004125749.1| deoxyuridine 5'-triphosphate nucleotidohydrolase dut [Alicycliphilus denitrificans BC]
MKIDVKILDPRMADQLPAYATPGSAGLDLRACLDAPLLLAPNAWQLVPTGIAIYLKDPGYAALILPRSGL
GHKHGIVLGNLVGLIDSDYQGQLMVSAWNRSDTAFTLQPMERLAQLVIVPVVQAQFNVVTDFPASERGEG
GYGSTGKH
>gi|319761813|ref|YP_004125750.1| fkbp-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans BC]
MEITEQCVVALTWVLKDTLGDELDVLDDPVEFLVGGDDLLARIEEALQGHGVGAELALHLEPEDAFGDYQ
DKLLFLEPRQLFPADIEEGMTFDGTALPQGVNPEAPRDALYTVAQIYPEHVVLDGNHPLAGIALRLQLKV
HGVREATEEEIGRGTAGTGFFRIQPQAPGNELLH
>gi|319761814|ref|YP_004125751.1| transcription factor jumonji jmjc domain-containing protein [Alicycliphilus denitrificans BC]
MDVEQPLALLGGLSPAQFMRRHWHKKPLLVRQAMPGFKPLLTRAELLELAGRDGVESRFIQDKAGRWVLR
HGPLARRSLPPLGTPRWTVLVQGVDLHDDAVHALMQQFRFVPEARLDDLMISYATDGGGVGPHFDNYDVF
LLQAHGQRRWRIGRQKDKTLRPGLPLKILAAFEPEEEYLLEPGDMLYLPPGWAHDGIAEGECMTYSIGFR
SPNGAQLAHEVLQRMAEAAADEEGAIYRDPQQPAVAGPGAIPAGLQEFARKAVQRALEQPQALECALGEA
LTEPKPNVWFEPAQAGVMLESVALDRRTRMMYDDKHVFINGESYRAAGRDAALMRQLADERRLGARELAR
ASDAALELLSTWCEAGWVHAGPAV
>gi|319761815|ref|YP_004125752.1| hypothetical protein Alide_1100 [Alicycliphilus denitrificans BC]
MPTAPQLPGGRFEGREAFQQLVRDALACAAREGWSELMLCDASFHDWPLGERAAVESLQQWARTGRRLTL
IAAGYDEVVRRHARFVQWRVRWDHIIVCRRAGAADPQDLPSSIWSPHWVLHRHDPLRCRGVTGTEPERRI
LLRESLLEWVERKSSPGFPASTLGL
>gi|319761816|ref|YP_004125753.1| nlpb/dapx family lipoprotein [Alicycliphilus denitrificans BC]
MNATTRLGLLGLALTLSACSVLESDKIDYKSATKGPTLEVPPDLSQLSRETRYTVPGSAVSAAAFEAGQA
QQPRGAASAAPQSIGDVRIERDGNQRWLVVNRAPDQLWEPVRDFWLENGFVFTTEQPKLGILETDWAENR
AKLPQDIIRSTIGKVFDSLYSTGERDKFRTRLERTANGSTEIFITHRGMAEVYTNTQKDSTVWQPRPADP
ELETEFLRRLMVALGVSEEQSKAAAAAPMPVTPGARMATVNDVPVVQLDEGFDRAWRRVGVSLDRTGFTV
EDRDRSKGVYFVRYVAPTDKKEQGFFSKLFSRSPDASAPLKYRIVVRSEGNQSTVSVLNAAGAPETSANA
QRIVRVLADDLK
>gi|319761817|ref|YP_004125754.1| dihydrodipicolinate synthase [Alicycliphilus denitrificans BC]
MTSPSAPLTGSIVALVTPMHDDGSVDYPTLRKLIDWHIQEGTDCIGVVGTTGESPTVNVDEHCEIIRVSV
EQAAGRVPVMAGCGANSTAEAIELARFAKKVGANSQLQVVPYYNKPTQEGQYRHFKAIAEAVGDLPMVLY
NVPGRSVADMLHETVLRLTQVPGIVGIKEATGNIERAQWLIRDVPKGFAVYSGDDPTAVALMLCGGQGNI
SVTANVAPRLMHELCVAAIAGDARRAMDIQFRLLPVHKHLFVEANPIPVKWAMQRMGLCGGAMRLPMTPL
SQGNEAVVETALRAAGLL
>gi|319761818|ref|YP_004125755.1| methyltransferase type 11 [Alicycliphilus denitrificans BC]
MEASDWIQRWSHLVPAGGTVLDVACGAGRHMRWFSERNHPVTGVDKALEAIEAVAPLGEAVQADIENGPW
PLPGRRFDCVVVTNYLWRPLLPTIVDSVAPGGVLLYETFAQGNETVGRPARPEFLLRPSELLRACEGLRI
VAYEDGFLDAPARFVQRIAAVREPPSPLVRMPLYRF
>gi|319761819|ref|YP_004125756.1| hypothetical protein Alide_1104 [Alicycliphilus denitrificans BC]
MRAAHKRWIAAALALAVLLAVFALYLQPEFMRTLADQIWACF
>gi|319761820|ref|YP_004125757.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MHDTTRKLSMAQVLICGATIVTLSMGIRHGFGMWLQPITQDMGWTRQTFALAMAIQNLSWGVFGIFGGML
SDRFGAFRVLILGALLYAMGLAGMALSPTPLLFSLTTGVLIGAAQAGTTYAVIYGVLGRQISAERRSWAM
GVAAAAGSFGQFLMMPLEGQLILRLGWQNALLVLSAMVLLIVPLAFGLREPGFHGSAPIRRTQSARHAFA
EALRYKSFLLLTAGYFVCGFQVVFIGVHMPSYLRDHGLSPQVASYALALIGLFNVFGTYISGTLGQRMQK
RHILAFIYFARAVVISVFLLVPLSPLSVYVFSAVIGALWLSTVPPTNAAVAQIFGVQHLSMLSGFVFFSH
QIGSFLGVWLGGYLYDTTGSYDIVWYMAIVLGVAAGLINLPVREGAIARATPQAA
>gi|319761821|ref|YP_004125758.1| DNA topoisomerase (ATP-hydrolyzing) [Alicycliphilus denitrificans BC]
MAVKPSSASAYSEGSIRVLKGLEPVKQRPGMYTRTDNPLHIVQEVLDNAADEALAGYGKKIKVTLHEDGS
VSVEDDGRGIPFGLHPEEGAPVVELVFTRLHAGGKFDKGQGGAYSFSGGLHGVGVSVTNALSTRLEVSTH
REGQIARLAFAAGDVAEPLLARPLAAGERRQGTTVRVWPDAKYFESAQLPMGELTHLLRSKAVLMPGVSV
SLVNEKTRDQQAWQYKGGLADYLAQSLPADPVIPLFSGEGFADAGHDSFAEGEGAAWAVAFTEEGSPVRE
SYVNLIPTSAGGTHDSGLRDGLFQAVKGFIELHALLPKGVKLLPEDVFARASYVLSAKVLDPQFQGQIKE
RLNSRDAVRLVSSFVRPALELWLNQHVDYGKRLAELAIKAAQTRQRAGQKVEKKKGSGVAVLPGKLTDCE
SRDTAYNEVFLVEGDSAGGSAKMGRDKETQAILPLRGKVLNTWEVERDLLFRNNEVHDISVAIGVDPHGP
HDSPDLSGLRYGKVCILSDADVDGAHIQVLLLTLFFRHFPRLIEAGRIYVARPPLYRVDVPARGKKPAAK
LYALDEGELEAILDKAAKDGVPREKCQISRFKGLGEMNAEQLWETTLNPDTRRLLPVQLGALDFAATEGL
ITKLMGKGEAASRRELMELHGDAVEVDI
>gi|319761822|ref|YP_004125759.1| DNA topoisomerase iv, a subunit [Alicycliphilus denitrificans BC]
MSDQPVLDFSGADAGDALGLGGYAQRAYLEYALSVVKGRALPDVCDGLKPVQRRILYAMDRMGLSYSGNA
PAKPVKSARVVGDVLGRFHPHGDQSAYDALVRLAQDFSQRYPLIDGQGNFGSRDGDGAAAMRYTEARLTK
IAGLLLGEIDQGTVDFVPNYDGSTQEPRQLPARLPFALLNGASGIAVGLATEIPSHNLREVADACVALVK
NPRLSDEELFALVPGPDYPGGGQIISSVADIQDAYRGGRGSLKVRARWKIEDLARGQWQMVVTELPPGVS
AQKVLEEIEDITNPKVKAGKKALTQEQQQLKASMLAVLDGVRDESSKDAPVRIVFEPKTGRVPQQELVTA
LLGHTSLETSAPINLTMVGLDGRPVQKSLRQMLAEWVEFRQQTITRRSQHRLAKVLDRIHILEGRQLVLL
NIDEVIAIIRAADDPKAALMARFSLSERQAEDILEIRLRQLARLEAIKIEQELSELRKEQGQLEDILANP
ASLRRLMVREIEADAKQFADARRTLIQEEKKVVAEVKVVDEPTTVVVSQKGWVRTRQGHGHAADSFAFKA
GDGLYGTFECRTVDQLIVFGSNGRLYSVPVAQLPGGRGDGQPVTTLIELEPGTQIAHYFAGPVQAQLLLA
GSGGYGFVAQVEHMVSRNKGGKAFVALGEGETLCAPSHVAGTSASQPLAAATHVCCASAGGRILTFDIGE
LKQMDKGGRGLMLIALEDKDSLAGAAAYTRSVRIAGVGRGGRQREEQLEIRSLNNARGTRGRKGKAADLG
FKPAAVLRVE
>gi|319761823|ref|YP_004125760.1| endoribonuclease l-psp [Alicycliphilus denitrificans BC]
MSVYDKLKELDITLPPLAVPAAAYVPYVQTGNLLFLSGHIARKDGKPWAAQFGKDITTEEGKAAARAVAI
DLLGTLHAATGGDLNRVQRIVKVMSLVNSTGDFTEQHLVTNGASELLGEVFGDKGKHARSAFGVAQIPLG
ACVEIELMAEID
>gi|319761824|ref|YP_004125761.1| DNA internalization-related competence protein comec/rec2 [Alicycliphilus denitrificans BC]
MLGAVLGVALQLQQAQLWPWPVYAGTLALALLGAGLAWKAPRPGAFAWLAAALLTWSVCGLRAAAFLAGA
LAPQLEGRDLRVTGVVAAMPQPRETGLRLRLEVESALLDGAPVRVPGLIDLSWYAGAPGGGAQDEARPPP
ALQAGERWRLTVRLKAPHGGRNPHGFDYELWLWEQGVQATGYVRTGARLDALHGPPERLGATWRHPVEQL
RQRVRDAIVRGLAPGADAAGQRAMGVVAALVTGDQRAIEREDWDLFRATGVAHLMSISGLHITLFAWLAA
ALVQRAWRRSRRLCLALPAPTAALAGGVLLAGAYALFSGWGVPAQRTVCMLATVALLRLSGRRWPWPQVW
LLACAVVLAADPWALLQPGFWLSFVAVAVLFATDMGAAGARPTGAAGRFLGLLREQWVVTLALTPLTLLL
FGQVSIVGLLANLLAIPWTTLVVTPLALLGVLWAPLWQAAAWCVQWLTVLLQWLAAWPWAQVSLPMAPQW
AGALAVAGGVLLALRLPWGVRALGLPLLLPALWWQPPRPAPGQFELLAADVGQGQAVLVRTARHALLYDA
GPRYHQDSDAGERVLAPLLRALGERLDLLVLSHGDTDHTGGAAAVLARQPQARVLGSIGAGHPLQSLRPI
EPCLAGRRWEWDGVRFEVLHPPRGVDATAPGPRAPRPNAHSCVLRISAGAPPGASALLAGDVERAQEQSL
VAGGALLAADVLLVPHHGSKTSSSEDFVDAVRPRLALVQAGYRNRFGHPAPEVAARYQERGIALVQTTRC
GAARWSSAAPQEPRCEREAARRYWHHAVP
>gi|319761825|ref|YP_004125762.1| aldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MRYPDTRLFIAGQWQDAADGKTLPVVNPATGEEIGRVAHAGIADLDRALAAAQKGFEAWRDVPAIERARA
MRRAAALMRERADAIAAILTQEQGKPLAEARVEAMAAADIIEWFADEGMRVYGRIVPSRNLAVRQMVVKD
PVGVVAAFTPWNFPINQVVRKLGAALAAGCSVLVKAPEETPASPAELIRAFADAGLPAGVVGLVYGNPAE
ISNYLIPHPIVRKVTFTGSTPVGKMLAGLAGQHMKRVTMELGGHAPVIVCEDADIELAVKAAGGAKFRNA
GQVCIAPTRFLVHEDVRADFVAALARHAQGLKVGDGLAEGTQMGPLANPRRVAAMKELLGDAVQRGATVR
AGGERIGEVGNFFAPTVLDNVPTSARIFNEEPFGPVASVRGFTKLEDAIAESNRLPYGLAGYAFTRSLKN
AHLLSQRVEVGMLWINQPATPSAELPFGGIKDSGYGSEGGPEALEACLNTRAISITNV
>gi|319761826|ref|YP_004125763.1| rhodanese domain protein [Alicycliphilus denitrificans BC]
MPFTTLISVSELQALVRSSQPLMVFDCSFDLAQPSLGAAQYREAHLPGALHTDLDKNLSARHGAPGHGGT
LTASAADEPASGGRHPLPGRERFATWLSSIGFSNDMQAVVYDRNGANYCGRLWWMLKWAGHDAVAVLDGG
LQAWQAAGGKLASGEGPARFQSNFELRAPLRRLVGVQEVLEHLGRPHQTLVDARATPRFRGEVEPLDPVA
GHIPGALNRPFGLNLGPDGCFKSPGQLRAEFQDLLGGRPPASVVHQCGSGVSAVPNLLAMEIAGLGPTAL
FAGSWSEWCSDPARPVERG
>gi|319761827|ref|YP_004125764.1| transmembrane protein [Alicycliphilus denitrificans BC]
MQALWMVLAAFLFASMGVCVKFASAYFNSAEMVFYRGIIGMAVLWWLARSQQVALATRYPGMHAWRSLIG
VLSISAWFYAIAHLPLGTSMTLNYMSSVWVAAFIVGGALFTWRPSSRQPRPPLQVPLLLTVLTGFAGVVL
MLRPSLGDSQGFAALIGLGSGLGAALAYMQVVALSRLGEPETRTVFYFATGSAVAGAAAMAVTGMSSWPG
WPALWLLPLGMLAALGQLCMTRAYSRALTPRGTLVVANLQYSGIVFAGIYGVLLFGDQLPLAAWAGMAII
VASGIAATVLRTQAAPDTPAEEH
>gi|319761828|ref|YP_004125765.1| rieske (2fe-2S) iron-sulfur domain protein [Alicycliphilus denitrificans BC]
MSDLSLRLQQAASQLPVSSYFDEALLQRELETIFRQGPRYVGHALSVPEIGDYYALPQESEGRALVRGAN
GRVELVSNVCRHRQAVMLKGRGNLQAQGKGHAGGNIVCPIHRWTYSSSGELLGAPHFAHDPCLNLNNYQL
REWNGLLFEDNGRDIAADLAGMGPQHDLSFEGYVLDHVELHECSYNWKTFIEVYLEDYHVGPFHPGLGNF
VTCDDLRWEFAREYSVQTVGVAPTFGKPGSDVYRKWHEVLLKYQGGKLPERGAIWLTYYPHIMVEWYPHV
LTVSTLHPIGVDRTLNMVEFYYPEEIVAFEREFVEAQRAAYMETCIEDDEIAERMDAGRKALMQRGDNEV
GPYQSPMEDGMQHFHEWYRERLGDAVPKA
>gi|319761829|ref|YP_004125766.1| exodeoxyribonuclease vii, small subunit [Alicycliphilus denitrificans BC]
MPKAPAAPAPQPDPASYEAALEELEQLVARIESGQLPLEQMLAGYQRGAALLNFCRARLEAVQDQIKVLD
EGALQPWTQE
>gi|319761830|ref|YP_004125767.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
MPTSDYDFARWMRGQLAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACEAVGGLGQAAL
RAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDALQALAFELLTPEDGVPPAMQA
RLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGAACGEPAGVAEQALAQ
YGAAIGLAFQVVDDVLDVTQDSATLGKTAGKDAASDKPTYVSLMGLDAARDHAEALRAEAHAALAASGLA
DTRALAELADMVVRRSH
>gi|319761831|ref|YP_004125768.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans BC]
MSTTNYPLLERVNDPADLRRLSRAELKSLAGELRAFVLESVSKTGGHLSSNLGTVELTVALHAVFDTPRD
RLVWDVGHQTYPHKILTGRRERMGTLRQLGGLSGFPQRAESEYDTFGTAHSSTSISAALGMALAAKQKGE
DRRAIAVIGDGAMTAGMAFEALNNAGVADADLLVILNDNDMSISPPVGALNRYLAQLMSGQFYAKARDVG
KSVLRNAPPLLELAKRLEQQAKGMVVPATLFEKFGFNYIGPIDGHDLDSLIPTLENIRSLKGPQFLHVVT
KKGQGYKLAEADPVAYHGPGKFDPRVGLVKPATPPKQTFTQVFGQWLCDMAAKDQRLVGITPAMREGSGM
VEFHQRFPGRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAG
LVGADGATHAGAYDIAFVRCIPHMSMACPADERECRQLLTTAYEQDHPVAVRYPRGAGVGVAPLAGLEGL
PFGKGEVRRQGRRIAILAFGTLLYPALQAAEKLDATVVNMRWAKPLDTELLLRVAAEHEALVTVEEGCIM
GGAGSAVGEALNAAGVLRPLLQLGLPDAFIEHGDPARLLALQGLDAEGMERAIAQRFCARPAAVPSRAVA
>gi|319761832|ref|YP_004125769.1| extracellular solute-binding protein, family 7 [Alicycliphilus denitrificans BC]
MDRRSLIKNAGLAGVLAAGVAPAVHAQAAVRWRMATSFPKSLETLHGAGVKFAETVKALSGGKFEVSVHA
AGELMPAFGIVDALSEDTIEMGLTAAYYYTGKDPAFAFSCAVPFGLTAGQNQAWKEHGNGRKLLNELFAK
YNFQTLSALNTGTQMGGWYRKEIKSPADFKGLKMRLGGGVFGESMAKLGVVAQNMPAGEVYQALEKGTLD
AVEFVGPYDDEKLGYNKVAKYYYYGAWWEGGADLEFFVNNKALAKLSPENQAIVKAAAAVANQDGTSKYL
MLNPVSLKRMVGSGTQLKPFPKAVVEAGFKAAQEVYAEHSAKEPAFKKIYEDLRAFQRDQILWSRISELP
FLQTMASVKI
>gi|319761833|ref|YP_004125770.1| dead/h associated domain protein [Alicycliphilus denitrificans BC]
MARTGTGSRQRAAQALEQFTPATRAWFASAFGAPTPVQEAAWDVIRGGECALVIAPTGSGKTLAAFLHAI
DRLFAEKDGATADAAPGAATRVLYISPIKALGADVQRNLRLPLDGVGAQRVRRGDPAVEITVGMRTGDTP
SAQRAALLRRPPDILITTPESLYLMLTSKARETLRDVRTVIVDEVHAVACTKRGSHMALSLERLDALLDR
PAQRVGLSATVRPVDRVAAFLGGARPTTVVNPPAGRRLELRIVVPVRDMADIPARDESGTMGSIWPHVEA
SILEQVLSRRSTIVFANSRGAAEKLTARLNALYAERMQIPRQGDAPAAVQYASSSGGTGNRTDGAAPLIA
RSHHGSVSKEQRSDIEDALKSGALRCVVATSSLELGIDMGLVDLVIQVAAPPSVASALQRVGRAGHQVGG
TSRGLVYPRTRRELVDAAVTVRRMLAGELEAIEPPRNPLDVLAQQTVAAVAMDAMHVDDWYALVRRADPF
RALPRSAFDATLDMLAGRYPSDEFAEFRPRLVWDRIGGQLGARPGAKSLAVISGGTIPDRGMFTVMLPEG
EEKAGARRVGELDEEMVYESRVNDIITLGATSWRIQQITHDQVIVVPAPGRSARLPFWRGEGLGRPAELG
EAIGAFLREVDAAPRDAHAALEAAGLDANAIANILQLAAQQREATGALPTDRTLVIERCRDEGGDWRVML
HSPYGQRVHAPWALAIAQRIRQRLNVDPSVVAGDDGIIARIPDMEGRTPGAELFLFDAEAVQRIVAEAVG
ASSLFAARFRECAARALLLPRRSPGKRSPLWQQRLRAGQLLEIARGYPDFPILIETARECLQDVYDLPAL
GALMRRLQDGGIRMLEVTTEVPSPFAADLLFGYVAEFMYEGDAPLAERRASVLSLDSSLLADLLGQVDMG
EILDPVVVEQAGLELQRIAVQRRASGMEGVADLLRELGPLAPDAIVQRTAQQDPAAVAVWLSGLETAHRA
MRATVAGEERWAAIEDAARLRDALGARLPAGVPKAFREPVPDPLRDLVARYARTHGPFTTSEVAQHFGLG
AAVADEALERLQAQGKVLKGSFGVERHLRAQDAHRLAQGPVARHEWVAEDVLRRLRQRSLQAAREAAKPA
AQHAYVQLVLERQALVPELTACAANDAPPFAQGTLEGTAGVARVLEQLAGLPLPASQWESLVLPARVRDY
RPFMLDELLASGEAVWAGHGAAGDGDGLVSLHLSEMAADTLAPQPEAGGDAPTGLRQAILDVLGRGGAFF
ARQIAQHVDADPAQLHAALWQLAWSGYVTSDGWQPLRALTSPHGSRRAETVRPQRRSWRMRGRPQPPDAP
EHAGHSGIALGDLTLAGRWSLVQRPASSDTERAFALAEGLLDRHGIVTRSAVMAENVPGGLPALRPVLHA
MEDAGRVLRGRFVDGLGAAQFADKAAIERLRELTQLQTAQPLAVALSVLDPANPFGAALAWPAHRLGIRP
QRRSGGIVVLCGGRLALYLTPGRRQLLTWLDAERADERTALAHALQALVHALEREKRGRFTIETVDEQPV
GRYPLLGLLREAGFSRVPKGLSWYG
>gi|319761834|ref|YP_004125771.1| trap dicarboxylate transporter, dctm subunit [Alicycliphilus denitrificans BC]
MEFIAANFAPLMFGGLLCFLILGFPVAFSLGACGLFFGLLGIELGVFPASTLAWLPQRLIGIMANETLLA
VPFFTLMGLILERSGMAEDLLDSVGQVFGPLRGGLALAVILVGAMLAATTGVVAASVISMGLISLPIMLR
YGYDRSLASGVIAASGTLAQIIPPSLVLIVLADQLGKSVGDMYKGAFVPGFALVGLYVLWVIALAIFKPK
MAPALPPEARTLREPNGSAGYTSLALLALLSTAVAVVLAQNMEAVHTWWQGELVESVPTDEKIVVAMCGG
TFVAWLIALANRVTRLGLLSRLAERVTFVLIPPLLLIFLVLGTIFLGVATPTEGGAMGAMGAIVMAASRG
RLNMSLLKQALATTTRLSSFVMFILIGATFFSMVFQAADGPVWVEHLLAQLPGGQVGFLVFVNIMIFVLA
FFLDFFELSFIVVPLLAPIADKMGIDLVWFGVLLAVNMQTSFMHPPFGFALFFLRSVAPDKPYVDHVTGK
TIAPVTTMQIYKGAIPFLILQLTMVAILITFPGLVTSQLDKKVDVDMNAVGTQMLENLNQQDLNFGEPGA
EGAEENKDDAGAAPAPELEPPASDAAATPGAAEADDPVKALEEAAGKR
>gi|319761835|ref|YP_004125772.1| tripartite ATP-independent periplasmic transporter dctq component [Alicycliphilus denitrificans BC]
MQALLALSRAIDKLNAFVGKYSIWLIFAATVISAINAIVRKVFNYSSNGFLEVQWYLFAWSFLVAAGYTL
LHREHVRIDVLNSRLPKKVQLWIEILGLIFFLTPICILVLWLCIPMLGEKFATGEMSPNPGGLLRWPVWA
ALPVGFVLLLLQGWSELIKCIAFLRGQGPDPTVKLGEKSAEEELAELLRQQAAAAARNPAPHAH
>gi|319761836|ref|YP_004125773.1| inositol monophosphatase [Alicycliphilus denitrificans BC]
MSSNLHPMLNVAIKAARAAGAIINRAALDVEAVRISQKQINDFVTEVDQAAEQAIIETLLTAYPGHGILA
EESGSQHGSKHSEYVWIIDPLDGTTNFIHGFPVYCVSIALAVKGKVEHAVVYDPTRNDLFTATRGRGAFL
NDRRIRVSKRTRLGDCLISTGFPFRPGDNFKQYMAMMAELMPRTAGLRRPGAAALDLAYVAAGYCDGFFE
AGLSIWDVAAGGLLVTEAGGLVGNFTGEADYLEQRECLAGAPRIYGQLVGLLGKYSKFASAGEKASVRQA
MADAPDAAADGQAPAADATTHPDSAAEDTQTRPGAAP
>gi|319761837|ref|YP_004125774.1| RNA methyltransferase, trmh family, group 1 [Alicycliphilus denitrificans BC]
MPAAHGAPAFMKTRFILIQTSHAGNVGAAARAMKTMGFDDLVLVAPRWPNVLRKEETIQRASGALDVLEN
ARIVATLDEALDGISHLCATAMTPRDFGPPTRTPRTHFDSLLKNQLPALDGRALEADSAMNHGPEAGVAF
LFGSERFGMANEDVYRCHVALSIPTNPGFGSLNLGAAVQVIAYEWRQALGGFGVPESAPQGERADAAQLA
GMLAHWEQALAAIGFLDPAAPKKLMPRLNQLFNRAQLTQEEIHILRGVAKSMLQAARPNR
>gi|319761838|ref|YP_004125775.1| serine o-acetyltransferase [Alicycliphilus denitrificans BC]
MLARLRSDIQCILDRDPAARSRFEVVTCYPGLHAIWLHLPAHWCWMHGLKWLGRFISHLARWFTGIEIHP
GAVIGERVFIDHGMGVVIGETAVVGDGCTIYHGVTLGGTSLYKGAKRHPTLGRDVVVAAGAKVLGGFEVG
DGAKIGSNAVVIKPVPAGATAVGIPARIIPSREGHSADVTESHKPEGTTFSAYGVTAQQDDPLTQAMRGL
IDSAGAQEHQITLLWQAIEKLSQSTPQGKDCVPCDAALSEQFQAAKLNDIIGK
>gi|319761839|ref|YP_004125776.1| nitroreductase [Alicycliphilus denitrificans BC]
MDVTQALRMRRSVRAFLPDAPPAKLVQTVLQEAAQAASGGNLQPWRVLALTGEPLRQVLAAVAQAQAEDG
PANQSYPQGLWEPYRTRRFSNGEDLYRAIGIPREDKAARLEQLAKNAEFFGAPVGIFVCVDERMGLPQWA
DLGIYLQSLMLLAVHHGLATCAQGFWRRYAGTLQRQLALPEPYRVACGVALGYEDEAAPINALRSTRAPW
AEWGELRGFA
>gi|319761840|ref|YP_004125777.1| alcohol dehydrogenase zinc-binding domain protein [Alicycliphilus denitrificans BC]
MTAMMKAAVFVEKGRIELADKPIPDVGPNDALVRITTTTICGTDVHILKGEYPVAKGLTVGHEPVGVIEK
LGSAVQGYQEGQRVIAGAICPNFNSYAAQDGFPSQDGSYLVPRGLCGCHGYKATAGWRFGNLIDGTQAEY
VLVPDAQANLAPIPDGLTDEQVLMCPDIMSTGFKGAENANIRIGDTVVVFAQGPIGLCATAGARLLGATT
IIAVDGNDHRLGIAKKMGADVALNFRNVDVVEEVMKLTGGKGADSSIEALGTQATFAQAMKVLKPGGTLS
SLGVYSEDLSIPLAQFAAGLGDHTIRTALCPGGKERMRRLMNVIAANRLDLGVLVTHQRRLDEIVEAYDL
FSHQRDGVLKIAIKP
>gi|319761841|ref|YP_004125778.1| molybdenum cofactor synthesis domain protein [Alicycliphilus denitrificans BC]
MTNTAHAYAPVKIGIVSISDRASSGDYEDKGLPALHDWLKRALHNPIGFEPRLIPDDKERISATLIELVN
LGCSLVLTTGGTGPALRDVTPEATLAVADKEMPGFGEQMRQISLRFVPTAILSRQVAVIRGKSLIINLPG
QPKAIAETLEGLKNADGTPQVPGIFTAVPYCIDLIDGPYLETRPEVCKAFRPKTAVRS
>gi|319761842|ref|YP_004125779.1| hypothetical protein Alide_1127 [Alicycliphilus denitrificans BC]
MSRKPQKGYFVKGHFVAEGSELDLQLKAELKGTAGATKTDLKREMEALQALGTELLTLRADLLARLDLPE
KLQEALDEARRITNFEGKRRQMQFVGKLMRKLEDDTVAAIRAALDEQRSGSAAEKLALHQAEHWRDRLIA
ADDALPQWLEQFPDTDTQQVRALIRQARKDAPPEDKAAVSQGLAPRKGRAYRELFQLVREHMARAQAHNE
ASSETHHEEQRP
>gi|319761843|ref|YP_004125780.1| peptidase u62 modulator of DNA gyrase [Alicycliphilus denitrificans BC]
MNTPSTRAKSAAPAQHAARPESGFSYTREFFEGLVDHALAHARKLGASDAGADASEGCGLSVNVRKGELE
TVERNRDKSLGVTVYLGHRRGNASTSDFSPAAVERTVQAAYDIARFTAEDHVAGLPDEADIAPAGTHRDL
QLFHPWAITSEQAAQLALQCEAAAFKTHRRITNSEGAGVSAQQSHFFSAHTRGFRGGYASSRHSISVAPI
ASMPGRNAEMQRDAWYSSMRDARDLAAPEAVGRYAAERALSRLGSRKIPTTECPVLFESPLAAGLLGGFV
QAVSGGALYRRSSFLVDSLGKQVFADHIDLAEDPFIPGGKGSSPFDEEGVRVAPRQVVEAGRVQGYFLST
YSARKLGMKTTGNAGGSHNLLLSSRLTQPGDDLDAMLRKLGTGLFVIELMGQGVNYVTGDYSRGASGFWV
ENGRIAYPVHEITIAGNLKDMLRGIVAVGADAYNYGAKTVGSILIERMKVAGS
>gi|319761844|ref|YP_004125781.1| hypothetical protein Alide_1130 [Alicycliphilus denitrificans BC]
MTKTPPTEKWLLNERAVIAGELQAIEAELERLIVRKAYLHKLLTALDEVYSLVTPVVSPVQGLVVHGHTR
YGGRGNGIQWVRDMLCAAYPSALDTAALTLAAEEAFGLVHATPAQRGKFRNNSLRTALRTLLAQGEAERL
HDYKGVPHRAGVWRWVPPEPAYADVVAQAEHAREHAWP
>gi|319761845|ref|YP_004125782.1| hypothetical protein Alide_1131 [Alicycliphilus denitrificans BC]
MALTMTRTRTQTTLTKLAQKLGEVKGELVFVDEWMAEKGAPVELAHRRVLLVEQAEALVLTLQLFDPELD
VDAVAQGEGWRKAYRVRSAKSLRTQYLRLHQASVSSARPPR
>gi|319761846|ref|YP_004125783.1| hemolysin-type calcium-binding region protein [Alicycliphilus denitrificans BC]
MSSAVMSAGGAGAPAEGKKLFPLRKRTGTAAFHLSKDAVDFGAEDLERLTEKQAVMLLAETVWGSTKEMN
CPHCGTFDAHYFYSRELRWKCKCCDKKFSVTSKTVLADHKLSLVKILKIAYSWANGASGKPALQLRRDWN
VGYPTVFTLVHKLREGLLRGFNVGVLCGVQEMAFFRTAGLALGDIPVERQYDPTDAGFINDESVNKYEQV
IWSAYGSLGSTRLTNPVGSAPEPSFVYQAGQGPLVLNPQGSHHTLELHGVLEQDVTPYRKGNDLVLLLND
ADRVTVKDWFLAKPDAPLIKTFSIGKQTSWTDRSFAQASLLVEGTTGDDTVTSTEQPETYLYWRGDGHDV
VRVSEAATAPSPDTVDEVRFKDISSEEVAFTRVGDDLKVVLPADGSITVKDWFLAAVNRQVEYMAFTDQR
LSAAEITARVGTVVLTGGNDTYTGTAGADIVYGMGGSDIINGDPASASSSDRVYGGDGNDTLYGLGGNDQ
LYGQQGDDKLYGGDGDDLLDGGSDNDTLDGGRGADTLIGGAGDDILGGAAGSVDAGYYNGYYGLGYYDPG
AGNTYRGGKGADTLNGTSRADRYLFDLGDGHDTLREVEVTGQPSGQVDVLRFGPGIAPADISIRRSTVDL
VLAHVNGTDSVTVKSWFTAPGSSANQVERVEFADGTAWSHIDLTAWALVVTGTEQGERLEGVGTFNDTLY
GLGGNDILVGGAGNDILDGGADNDVLDGGVGADVLLGGSGDDVLGGALGSEDSGRVVHGTFQSPGAGNVY
EGGTGNDTLRGTALADTYHFNLGEGQDSLTEVEMAGQPAGQVDVLKFGPGIAPGDIQVLRQGSDLVLAHV
NGADRFTVKSWYTTQGSTANQLEQVRFADGTAWSADELTERGLVVQGTSTGETLTGLTAYANTLLGEGGN
DVLNGGTLSDQLWGGLGNDHLYGGQGSDFYYHRLGDGYDTVVDSGGMADTLVFPDAALSNASFYSKGADL
EVHFGTGQGVLVKNQLSSSPVVEFMMFGDQVYSAAHIATLVGVPS
>gi|319761847|ref|YP_004125784.1| hypothetical protein Alide_1133 [Alicycliphilus denitrificans BC]
MLRVHLHTGDLEGRNTANQLAVIDIAYAKKGALADYLVGMTLRGQGEVEPDAVLRYPRWSASLWDLVARA
LTRLLYRANQAPASERPDKRCAYATRLCAVIERSTLDGAGVELGTARIFQKEGQRGHYTAVFNEDINGQH
VGHFTYGSKRLDAGDLLLRAICWALFDKDTLGPYPALILPPTLQIDGVDRFHVEALTEPARTGFERYRGA
NFPTTQAPEPLAKAQDYVAFLMHG
>gi|319761848|ref|YP_004125785.1| hypothetical protein Alide_1134 [Alicycliphilus denitrificans BC]
MRVKVRPLQCKGQLLPRQLATQQPPRIGALRVAEERDHELGRPVLRARLLDMQNGTEADLLPDLSDARLL
WAENNRLRFAGFERVDNANYAQTWEVEVAEGVA
>gi|319761849|ref|YP_004125786.1| lexa repressor [Alicycliphilus denitrificans BC]
MTEHDEKYLAKLRTHWKRHAAFPSMAKLCDTVGLSSTSSVFALVGRLVEAGYLARVDSRIAPTRKFFARP
LLSPVRAGQPQPASQEEPEVLTIDDYLIDDPNRTSLHKVRGDSMKDAGILEGDLVVVEHHTPTKPGDIVV
AWADNELTVKTLLLDPQGRYYLQPANSAYQPIFPATSLEVMGVVIGVVRKTRR
>gi|319761850|ref|YP_004125787.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319761851|ref|YP_004125788.1| hypothetical protein Alide_1139 [Alicycliphilus denitrificans BC]
MNAPAAAPTIRPRDRDAVVQSLRAGVVPRSGQHLIQVGRTREIETLIGDIDRIVDGGSTFRLVIGEYGAG
KTFFLNLVRAVALEKKLVVASADLNPDRRLHASGGQARSLYAELMRNIATRTKPDGGALGGIVEKFIATA
KAEAKAAGVSTEAVIRQKLEHLTELVNGFDFADVIAAYCRGFEEGNEQLKADAIRWLRGEFSTKTDARVA
LGVRTIVDDAAVFDQLKLMARFVRLAGFSGLLVSLDELVNLYKLANAQARNSNYEQILRILNDSLQGTAV
GLGFILGGTPEFLLDTRRGLYSYSALQSRLSQNTFAADGLVDFSGPVVRLSSLTPEDFYVLLQKIRHVYA
LGDATKHLLPDQGIFSFMEHCANRIGDTYFRTPRTTITSFVNMLAVLEQNPGTDWQQLLGGLEVTPDTAG
AADLRVDEDDELASFKL
>gi|319761852|ref|YP_004125789.1| dead/deah box helicase domain protein [Alicycliphilus denitrificans BC]
MASKSSSFHLLDERIQRFIWAEGWEELRDAQEKAIPLIVKGEQDVIISAATAAGKTEAAFFPALTHLLAT
DGDGLIVYVSPLKALINDQFGRLERLCAQLEIPVWPWHGDVSASVKTRFLAKRRGVLLITPESLEALLCN
RGSSVGAVFERVTFFVVDELHAFIGSERGKQLQSLMHRIERALDRKVPRIGLSATLGDMRLAGQFLRPDA
EPAQVNSAAAGSELKVLVKGYEEPLAVKSERDDEGESEPVTPGQVAAHLFKVLRGANNLVFPNSRRQVEQ
FTHLLNKMCERERVPNEFWPHHGSLSKEIRAETEAALKQKELPATALCTNTLELGIDIGAVKSVAQIGPP
PSVASLRQRLGRSGRRKGEPAILRGYCIEDALGPRASLRDKLRLDTVQTAAMISLLVDKWFEPPRVQGVH
LSTLVQQLLSAIAQRGGVMAGEAYGLLCGPGAPFTGLSKQEFVDLLRHLGHKELLTQDSSGALLHGRVGE
KFVNHYSFYAAFASEEEFRVVAGGKTLGTLPVDQMLLPGQRILFAGRTWHVDEVDEQQKAIYVTRAPGGA
PPMFSGGVGRTHTRVRQRMRELLEGTSSPPFLDAGAQRFLTQARTAYSHLRLASEFALDQGKELMLMTWL
GDAANEAVACLLISRGFVAFPSGPGVEVVKGERSTQGILDALADIAAADMPLLDILLADVKNLAREKWDW
ALPDALLRKAYASLYLDLDEGLAWVRQVTGGRQS
>gi|319761853|ref|YP_004125790.1| hydro-lyase, fe-s type, tartrate/fumarate subfamily, alpha subunit [Alicycliphilus denitrificans BC]
MTTTIRYDDLVESVAAALQYISYYHPADYIAHLARAYEREQSPAAKDAMAQILTNSKMSATGHRPICQDT
GIVNVFLKLGMDVRFEGFAADQGLEDAINEGVRRGYNHPDNTLRASVVADPHFARKNTRDNTPAVINVQI
VPGDKLDVTVAAKGGGSENKSKMIMMNPSDNLVDWVLKTVPTMGAGWCPPGMLGIGIGGTAEKAVLLAKE
SLMEDLDMYELQAKAAKGEKLTQVEELRLELYEKVNALGIGAQGLGGLSTVLDIKIKMYPTHAASKPVAM
IPNCAATRHAHFVMDGSGPVYLEAPSLDLWPKIDWEPDYNKSKRVDLNTLTSAEVASWKPGDTLLLNGKM
LTGRDAAHKRIQDMLAKGEKLPVDFTNRVIYYVGPVDPVRDEAVGPAGPTTATRMDKFTDMMLEKTGLIA
MIGKAERGPVAIESIKRHKSAYLMAVGGAAYLVSKAIKAAKVVGFEDLGMEAIYEFDVVDMPVTVAVDAG
GTSAHITGPAEWQKRIATGEFKGIEVASA
>gi|319761854|ref|YP_004125791.1| fumarate hydratase, class ii [Alicycliphilus denitrificans BC]
MTTRIERDTFGPIEVPAGRLWGAQTQRSLQNFDISGERQPREIIKALAQVKRASATVNHALGLLDAKKKD
AIVAAAQEVIDGRHPDEFPLVVWQTGSGTQTNMNLNEVIANRASELLGGERGEARLVHPNDDVNKSQSSN
DVFPTAAHVAAVDALTHKLLPAIEVLRKTLAQKAKDFDGIVKIGRTHLQDATPLTLGQEISGWVAQLEHG
ARHVKDALPHLYELALGGTAVGTGLNAPKGYAEGVARELAAITCLPFVTSPNKFESLASQDALVHAHGAL
KTLAASMNKIANDVRWLASGPRSGIGEITIPENEPGSSIMPGKVNPTQSEAVTMLAAQVMGNDVAINIGG
MSGNFELNVFRPVVAHNFLQSVRLLADGIISFNNNCAVGIEPNRERIGYLVQQSLMLVTALNPHIGYDKA
AYIAKKGHKEGTSLREAAIASGYVTAEQFDQWVVPENMVGR
>gi|319761855|ref|YP_004125792.1| cyclic nucleotide-binding protein [Alicycliphilus denitrificans BC]
MHASPRPSADPPLQRPLLSAQEREAIDQSPWFSSLPPSLRHDIFRLGHVTRYAHGDLIAKQGQPIRNWFA
CASGALRFRRTTTAGRRVTLAYVEPGIWVGEAEVLYGRPCTYDAHAHGNTTLLSVPEAALRALLQQHPSF
GQSLLTLQAHSMRSLYLMMEDVATMPLRARLTKQLLHLQERFGPHHVAPGESRPLGLSLAQDELAGLLGG
SRQRVNVELKWLERQGLISVRPRGIELHDVQGLQALVAQAAAAAQGKPDG
>gi|319761856|ref|YP_004125793.1| substrate-binding region of abc-type glycine betaine transport system [Alicycliphilus denitrificans BC]
MTFACKTLRPLLAATGLALLGLTAQAADLPGKGITVQPLKSSIAEETFQTLLVMKALQKLGYEVQPIKEV
EYPTAHIAIANGDATFMADHWNPLHADYYKNAGGDAKLYRKGIFSANAAQGYLIDKKTADQYKITNIAQF
KDPKIAALFDSNGDGKADLTGCNPGWGCEAVIEHQLDAYQLRGTVTHNQGSYSALIADTITRYRAGKPVF
YYTWTPYWVSNELKPGKDVVWLEVPFSSLPGEQKGMDTKLPNDKNYGFVVNNQQIVANKAWAEKNPAAAR
LFEVMQLSVADINAQNHLMSQGQNKNADIERHANGWIAAHRKTFDGWIEQALAAAR
>gi|319761857|ref|YP_004125794.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MNENNNDTPAGLDDPWAAASSAADGPATGSADPWGAGTADPAQSAPDWLSSPSASPAPADADAGGLQALW
HQISTDGLPVQGWINDGLHWAVENFRPFFQSVRAPIDATLSGVTDALLALPWPVMLLLISLLAWQFAGRM
LALATAVSLGVVVLLGIWPDAMVTLALVLTSLLFCVVLGLPLGIVLAASDRAQRFTRPLLDAMQTTPAFV
YLVPVVMLFGIGNVPGVIVTIVFALPPLVRLTNLGLRQVRPDLIEASRAYGASPWQLLWKVQLPLALPSI
MAGINQALMLSLSMVVIASMIAVGGLGQMVLRGIGRLDMGLASIGGLGIVLLAVVLDRITQAMGAPRRGG
QRWWHTGPLGLLFGRLRQKS
>gi|319761858|ref|YP_004125795.1| glycine betaine/l-proline abc transporter, atpase subunit [Alicycliphilus denitrificans BC]
MAKQIIIDHVFKVFGDAPQEALRLVQQGLSKQEILERTGHSIGVFDASFTIETGEIFVVMGLSGSGKSTL
VRMLNRLIAPTSGRILVDGQDINELSQRQLRALRRKDISMVFQSFALMPHMTVLDNTAFGLELAGMDKAG
RQQAAQEALEQVGLAGWGASYPDELSGGMQQRVGLARALAADPSILLMDEAFSALDPIIRTEMQSELLRL
QQVKRRTIVFISHDLDEAMRIGDRIAIMKDGHVVQVGTPDEILREPANDYVRDFVRGVDAAAVFKARDIA
RQAFTMVSERSDRGCRAALRLLEDSDHEYAYVLSSRKRFLGVVSSQSLRRALHGHHGPLGLQHAFLDDAP
TLAADTPVAELFGPMASAPCPLPVMDGDGRFLGVVSRTTLMRFLDRDTPPVPPPQAELPPVQLDRQPPHD
GAAPAARIEGDATA
>gi|319761859|ref|YP_004125796.1| acetate/CoA ligase [Alicycliphilus denitrificans BC]
MSASPSAIESVLIENRVFPPPEGLVKTARISGMAGYEALCAEADKDFEGFWARLARENLQWTRPFTKTLD
ESNAPFYQWFADGELNASANCLDRHMGTPVESKTAIIFEADDGAVTKVTYKELLARVAQFANALKAQGVK
KGDRVLIYMPMTIEGVVAMQACARIGATHSVVFGGFSAKAVQERIIDAGAVAVITANYQLRGGKELPLKA
IVDEGIAMGGCESIKSVLVYERTPTAWNRVDGRDKSFAEALAGQSTECVPVAVEAEHPLFILYTSGSTGK
PKGVQHSTGGYLLWAKLTMDWTFDLRPDDVFWCTADIGWVTGHTYIAYGPLAAGGTQVMFEGIPTYPNAG
RFWQMIERHKVSIFYTAPTAIRSLIKAADSDEKVHPKNWDLSSLRILGSVGEPINPEAWMWYYKNVGGER
CPIVDTWWQTENGGHLITPLPGATPLVPGSCTLPLPGIAAAIVDETGKDVPNGSGGMLVIKRPWPSMIRT
IWNDPERFKKSYFPEEMGGKIYLAGDGAVRDAKTAYFRVTGRIDDVLNVSGHRMGTMEIESALVAKSDLV
AEAAVVGRPDDLTGEAICAFVVLKRARPTGEEAKQIAAELRNWVAKEIGPIAKPKDIRFGDNLPKTRSGK
IMRRLLRSLAKGEAITQDTSTLENPAILDQLAQNN
>gi|319761860|ref|YP_004125797.1| von willebrand factor type a [Alicycliphilus denitrificans BC]
MVFLWPTLLWLLLVLPLLVLLYLWLLRRRKAAAVPYPGLALVRQALGPGHGWRRHVPPLLFLLGLAALLV
AAARPLAVLQLPSQQQTIILAMDVSGSMRATDVQPDRLTAAQNAAKAFIQDLPRHVRVGVVAFAGTAQLA
QLPTQSHEDLLKAIDSFQLQRGTATGNGIMMALATLFPDAGIDIAALGGRQSMRVRPIDEVGRADPAKKP
FTPVAPGSYRSAAIIMLTDGQRTTGVDPLEAAQWAADRGVRVYTVGVGTVQGELIGFEGWSMRVRLDEDT
LKAVALRTNAEYFHAATAQDLRKVYETLSSRLTVEKKETEVSALLALAGAALMLLAAGMSVWWFGRIL
>gi|319761861|ref|YP_004125798.1| hypothetical protein Alide_1149 [Alicycliphilus denitrificans BC]
MPEAVRPPAAAPAAAERLLQRLEWTVIRRLDGLLQGSSRTLLRGSGIDLADLREYQPHDDVRHIDWNVTA
RLATPHVRVFTEDRDMTAWFLLDLSPSVDFGAPGQAKRDLAEGFVGVLARLLQRHGNRVGAVLHDGSAAM
GRVLPARGGRRQVLQLLHALATSARPSSLIPAPGITELQRLLGGAQGLLRRRSAVFVVSDFLSAPGWDKP
LARLAQRHDVVAVRLLDPLELELPDVGLLLLRDPETGEQLQVDTHERGFRHRFARLAAQREADLRASLAH
AGVDTLELSTDEDLLAALLRFMQLRGHRPRVAAANPALAAHG
>gi|319761862|ref|YP_004125799.1| atpase associated with various cellular activities aaa_3 [Alicycliphilus denitrificans BC]
MQTIPAATDSTATLMEQILYEVKRVVVGQDRFLERVMVAMLAQGHLLVEGVPGLAKTLTVKTLAACIQGQ
FKRIQFTPDLVPADLVGTRMYNQRTGEFSTTLGPVFTHLLLADEINRAPAKVQSALLEVMQERQVTIAGQ
SHPVPEPFVVMATQNPIETEGTYQLPEAQVDRFMMKVLIGYPSEEEEFVIAQRALAPAVQVAAVATTGQL
ARLQADCRKVYVDPSLIQYAVRLVAATRAPQQHGLKDLAAHIACGASPRATIALAEGAQALAMLRGRGYA
LPEDLLDLAHDVLRHRISLSYEALAEGLDADALIGRIMNQLPAPARPLHHSAEEAAGAEARRA
>gi|319761863|ref|YP_004125800.1| peptidase s1 and s6 chymotrypsin/hap [Alicycliphilus denitrificans BC]
MPRPVRYSPSRSDRARPSADPAAPESPPPRPAPVAPRQRLPSAQQAQWAAMALLAMLLAGGMWWLRPVPA
PHITQKAIDAAVLHTLENHTLPSAAARAAEAVVPSVVRVMGFTTTKRGKEVERSVGTGVVIVDTGIILTN
LHVVRGADRVSVTFADGTEANASITGAQPENDLAVLQAHKVPDDLQAAPLRSTQHLRAGDGVVVVGFPFG
IGPSASAGVVSGLQREFESPEGGQELRNLIQFDAAANPGNSGGPLVTLEGEVVGIVTAILNPTPARTFIG
IGFAVPIENAAQAAGMPPF
>gi|319761864|ref|YP_004125801.1| alkylhydroperoxidase like protein, ahpd family [Alicycliphilus denitrificans BC]
MSSSTDYKILTREISGNVGQLRASQPDVMQGFNAMSKAALAPGAIDAKTKELIALGIGVAARCDGCIGFH
TQALARLGATRAEVHETLAIAVYMGGGPALMYAANAVAAFDQCAPEQAPA
>gi|319761865|ref|YP_004125802.1| regulatory protein arsr [Alicycliphilus denitrificans BC]
MATAADRGFMQQCTAQAAALLRTVGNEQRLLVLCLLIDRGEASVGQLLEQMDLSQSALSQHLARMREEGL
VTFRRDAQTLYYRIADPAVEKLVAALKAIYCP
>gi|319761866|ref|YP_004125803.1| hypothetical protein Alide_1154 [Alicycliphilus denitrificans BC]
MKRNVGGLDRGLRIVVGLVLIALAATGTVGWWGWIGVVPLLTGLVGGCPAYSLLGVNTCPMRKSE
>gi|319761867|ref|YP_004125804.1| tatd-related deoxyribonuclease [Alicycliphilus denitrificans BC]
MIRRMDAWIDTHCHLDEFAVHGGAAHADAERARAARAGVVHCVLPAVDLANLQVVRAMAHRYGDSYALGI
HPLYTPQARDDDPQALERMLERCLPDPRLVAVGEIGLDFFVPGLDAARQERFYRAQLQLARRFDLPVILH
VRRSADRLLKGLRELPVRGGIAHAFNGSLQQARAFIAMGFKLGFGGAVTYERALQLRRLAAELPLDALVL
ETDAPDIPPHWLYVTAAERAAGAAPARNSPAELPRIAAVVAGLRGIEVGELARASRDNACAALPKLRALL
A
>gi|319761868|ref|YP_004125805.1| hypothetical protein Alide_1156 [Alicycliphilus denitrificans BC]
MNALAASRLVGLPPVVGEGTRVLLLGSFPGAASLRAQQYYGHPQNHFWRILAALWPGHPLPGREDYAARC
GWLLARGLGLWDVYAACEREGSLDTSIRNAQVNDFRSLLARVPALAAIAHNGGESFRHARAVRASLGVDI
PSLRLPSTSPANASWSFEKKLNAWRDAFVPFGLL
>gi|319761869|ref|YP_004125806.1| hypothetical protein Alide_1157 [Alicycliphilus denitrificans BC]
MSRKKTPSPELPEVSVSDDGEVRHLHLGTPWIQGSMRIDDPFALELEYVQRMMAWLLFMEPSSVARRHAM
QLGLGAGAITKFCRKKLRMCCTVVELNPRVEAVCRAWFKLPPDGPMQRVVLADAAAEIKKPEWHGTVDAL
AVDLYDHEAAAPVLDSAEFYADCRALLTGDGCLTVNLFGRASSYERSVAKLAEAFGADALWAFKPTREGN
TVVLAQRTPTRPKRAELLARAEGLQARWDLPATKWLRVFKPIA
>gi|319761870|ref|YP_004125807.1| type ii secretion system protein e [Alicycliphilus denitrificans BC]
MSPTHNLAGPLEWRRVVEWLRADGVISAEQAQRTIARCSQAESSQHPLVRLGNVSMVRASDGKPLDVDML
AEYVAQRCGLAFLRIDPLKVDVGRVADAMSASYAERHKVLPVQVTAKEVVVATAEPFVQDWVAEVERQAR
RSVRRVLANPLDITRYTAEFYALAKSVREAQKAGGSAGGSSFEQLVELGRTNKQLDANDQGVIRVVDWLW
QYAFDQRASDIHLEPRREQGVIRFRIDGVLHTVYQMPMGVLSAMVARVKLLGRMDVVERRRPQDGRIKTR
NPRGDEVEMRLSTLPTAFGEKMVMRIFDPDNAVKDLDALGFTQHDAERWESLVKRPHGIILVTGPTGSGK
TTTLYSTLKRVATEEVNVSTVEDPIEMIEPSFNQTQVQPQLDFNFAEGLRALMRQDPDVIMVGEIRDLAT
ADMAVQAALTGHLVFSTLHTNDAPSAVTRLMELGVPPYLINATLLGVLAQRLVRTLCRHCRQLDEAANPE
ALADMIRPWRLNGGYRAYKPVGCVDCRMTGFRGRMGLYELLTVTEALKQQIHQTPSIDALRRQAVQDGMR
PLRLAGALRAAEGVTTLEEVIAATPPLE
>gi|319761871|ref|YP_004125808.1| hypothetical protein Alide_1159 [Alicycliphilus denitrificans BC]
MKIKSQKDFFAGLMFLVVGVAFAWGATTYTVGTGARMGPGYFPLLLGVLQAIIGAAIMFKAVVVETVDGD
KVGPWAWKQIVFIIGANLLFGILLAGLPSFGVPAMGLIVAIYGLTFVAALAGHEFHFKEVFILATVLAAG
SYVAFVWALNLQFPVWPSFIVG
>gi|319761872|ref|YP_004125809.1| hypothetical protein Alide_1160 [Alicycliphilus denitrificans BC]
MELLDHLSMGFGVAFTFQNLIYCFIGCLLGTLIGVLPGVGPVATIAMLLPATYALPPVAALIMLAGIYYG
AQYGGSTTAILVNLPGESSSVVTVIDGYQMARKGRAGPALAAAGIGSFFAGCVGTLILAAFAPPLTEVAF
KFGPAEYFSLMVLGLIGAVVLASGSLLKAVAMILLGLLMGLVGTDVNSGVARYSFDIPELTDGINFVVIA
MGVFGYGEIIANLSKSDEDREVFTAKVQGLFPTAQDFKRMFPAMLRGTALGSSLGILPGGGALLSAFAAY
TVEKKTKLHPGEVPFGQGNIRGVAAPESANNAGSQTSFIPLLTLGIPPNAVMALMVGAMTIHNIQPGPQV
MTSNPELFWGLVASMWIGNAMLVILNLPLIGIWIKLLTVPYRWLFPSIVLFCAIGVYSTNNNTFDVWLVG
AFGFVGYLFYKLGVEPAPLLLGFILGPMMEENLRRALLLSRGDWSVFVTRPLSAGLLGAAALLLIIVLLP
AVSKKREEAFVED
>gi|319761873|ref|YP_004125810.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MDLGIAGKWALVCGASKGLGRGCAEALVREGVNLVVNARNADELQRTATCLMAEGAAAAGVRGQNSSKPQ
VLVVAADITTPEGRAAAFGVAGGPGKGFDIVVTNAGGPPPGDFRGWNRDAWISAVDANMLTPIELIRATV
DGMAGRGYGRIVNITSSAVKAPIDILGLSNGARSGLTGFVAGVARSAIAARGVTLNNLLPGKFDTDRLAG
TIDAAAAKAGRSVDDVRRAQQAAIPAGRYGTPQEFGAICAFLCSVHAGYITGQNILADGGAYPGTF
>gi|319761874|ref|YP_004125811.1| extracellular solute-binding protein, family 7 [Alicycliphilus denitrificans BC]
MARLGPLLGAALLSAAMQAPAAEPAPQAGAALRLRVVGGLAGITQYAQLEAPFWTRDLARLSQGRFDADI
VPFDRAGVPGMEMLRLLELGVVPFGTVFMSSLSDRYPQYMAADLPGLNPDFAALRRSLAVFRPYLERALR
EEHGIELLAVYVYPAQVVFCKQPFDGLADLRGRRVRVSSAAQGDFVSALEAHPRHVPFARLAQSMEAGTS
ECAITGAMPGNAMGLHMYAAYLYPMPISWGMAIFGANGAAWKALPEELRALLRSELPRLETAIWLSAEQE
TLQGVDCNVGSPRCTTGRRGRMALVPVRPQDEARREDILRTVVLPRWLQRCGARCADLWNRTMGPARGPA
VPAKP
>gi|319761875|ref|YP_004125812.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MTMAPPRRLYLAVWGLAGTLVLGLAAAVAGLLWQTRADGLAAAEARVTRFAAGAETGMNRTLLSLDMLLA
STGELLRVGERSSLDVDGANALLRAMVRQNLMLRHVALFDARGEQLASSAQGQEPPPARLPPGLLATALA
PAVATLTVGQPQAAAPGPGQVLYAARPLRLADGMSLLAVAQVPMDVLVSVLLQGEGAAPEVEVTLERAQG
ELLMGLQAPWDAPERQGLAAPPLQEMGARGRHTGFWQARARLSGQPALVAARPLLYPDLWITASLPRSTA
LAAWKQDAAAVGGGALLFGACLVAAGILATVYLRRMHRARQSVAGAKATLDQAVGAMVSGFVLLDPARRI
VQWNRPFEEMFPWLAGTVAVGLPYRRVLETTVHYHLPGASAQDKRAWVERRLQQQRDPKGTHEQCLPNGH
FIQITERATPEGGLVILFHDVTDLRLAAAEIEQLAFYDQLTGLSNRRLLLDRLGQACAAAQRAGERGAVL
FIDLDYFKTLNDTLGHEMGDQLLQQVARRLQGCVRAGDTVARLGGDEFVVLLAGLPADAAEAALLARGVA
DKIVHLLGRPYQIAGQTYHGSFSVGATLFGELPQTTAGEVLKQADIAMYQAKAQRGSTLRFFEPSMQAAI
SERAQLEADLQQAIGMGQFLLHLQPQYDGAGAMVGAESLLRWQHPVHGLVPPARFIAVAEDSELIVPIGS
WVLRGACELLARWRHAPHLRDLSLSVNVSARQFRQDGFAELVVRLLQDTGAPAHRLELELTESLVLEDVE
DSIAKMHRLRVKGVRFAVDDFGTGYSSLSYLTRLPLHRLKIDKSFVHHLGESHSDDVVVQTILGMARNLE
LEVVAEGVETEAQRAFLARHGCDLYQGYLLARPMPVAQLEAMRLSLG
>gi|319761876|ref|YP_004125813.1| hypothetical protein Alide_1164 [Alicycliphilus denitrificans BC]
MTQRLQPGTIAMLVAAPLLWAGNAVVGRALHALISPSALNFIRWLLAFALLLPLAWRVLRPGSTLWPHWR
RYALLGLFGIGSYNALQYLALQTSTPLNVTLVGSGMPVWMLIVGALFFGVPATRRQIAGVLLSVAGVLLV
LSRGSWQQLLALRLVPGDLYMVLATISWAFYSWLLVRTTEPRDLRGDWAAFLMAQMVFGLGWSGAFAGVE
WSLGQAQAHWGWPLAAGLAFIAIGPAVLAYRFWGAGVQRAGPVMGGFFINLTPLFAAVLSAAFLGERPQL
YHAAAFALIVGGIVVSSRRA
>gi|319761877|ref|YP_004125814.1| alcohol dehydrogenase zinc-binding domain protein [Alicycliphilus denitrificans BC]
MTLAVQIRQHGGPEELQIVDVQVGDPGPGEVRIRHHAVGLNFIDVYHRTGLYPLSMPAGIGMEAAGVIEA
VGEGVTHLKAGDRAAYASQPPGSYCEVRVMPAKCVCRLPDAIGFETGAAMMLKGLTAQYLLKKARPVEGL
EPGDYVLFHAAAGGVGLIACQWARTLGLRLIGTAGSDAKCQLVLDNGAAHAINYAKEDFAARVKEITGGK
GVKVVYDSVGKDTWDKSLDCLRPFGLMASFGNASGPVPPFAPGMLGAKGSLYVTRQTLFSHIATREATQA
MADDLFAVVESGQVKIHIAQRYALTDVQQAHRDLEARKTTGSTILTLP
>gi|319761878|ref|YP_004125815.1| nudix hydrolase [Alicycliphilus denitrificans BC]
MTAATAPAWVAAARARATCGPAAPRTPLLLGGERVGSVDAEVFAKIDFKCLLYERYQLSIVEHEGAPAWA
LPAGEDATAALNALARALRAAGRCGPWRDEQLAVCGADGRRLATVERGAVRVLGLATQAVHLVGCTADGA
MWVQQRAFDKPNNPGMWDTLMGGMVSAADSLASAVERETWEEAGLRVAALQGVAHSGHVEFAQPSDEAGG
CGYMVERIDWFRAQVPEGMAPVNQDGEVARFELLPRTALLERLARGAFTPEASLILAAALGW
>gi|319761879|ref|YP_004125816.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MNVTLRQLQVFLSVAATRNFSRTGDQVGLTQPAVSRSITELEAQLGLQLLNRTTREVDLTDAGRSLAARL
PRVLEDLEATLLDVQGMSTALHGRVRVASSPTLSANLLPDCIARCQRELPGVQVMLLDRVQNDVLSSVLS
GEVDFGVVIDPGDREALHCEPIYTEPFGLACPPAHRLARRRQVRWTDLADEPLVLLDHASGSRRLIDRAL
AAQGVQARVAQEVGHATTIFRMLDAGLGVSVIPMLALPPEGLPRLAIRPLLPRVDRDIVLVHRRNRALAP
LAQRVWDLVRDVAHARQRITSPAPRPGSGSPQA
>gi|319761880|ref|YP_004125817.1| bile acid:sodium symporter [Alicycliphilus denitrificans BC]
MARSRLLPDNFTLALVATVVLASVLPASGTVGAFFEKATVAVVALLFFMHGAKLSREAVLAGLGHWRLHV
LVVASTFALFPLLGWGLRPVLQPLVTPELYTGVLFLCVLPATVQSAIAFTAVARGNMAAAICSASASTLL
GIVITPLLVGLVLPHTGTAQQDVLGSIGRIMLQLLLPFVAGHLLRPWIGGFIARHAAALKFVDQGSVLLV
VYTAFSAAVVAGLWRQLPLPALAGLLVVCAVILGAALTATTWLARRLGFPKEDEITIVFCGSKKSLVSGV
PMAKVLFASQAAGAIVLPLMVFHQMQLMVCAVLAQRYARRG
>gi|319761881|ref|YP_004125818.1| na/pi-cotransporter ii-related protein [Alicycliphilus denitrificans BC]
MKHLLNLLAAIALLVWGTHLVRVGVLRVFGANLRSLLARSMGNRFTAALSGIGVTALVQSSTATSLMTAS
FVGQGLIALPAALAVMRGADIGTALMAVLFSTDLSWLSPLFIFVGVVLYLSRQETTSGRVGRVLIGLGLM
LLALERVTQATEPMMASPITHVVLESMGSDVFAEILIGAVLAIVSYSSLAVVLLIAAMADTSVVPLDMAL
GMVLGANLGNGLTAMLTMAKSSVEVRQVTVGNMVFKLMGVVLMAPFIDGWIRFVQPHLPATSHSVVLFHL
AYNIIISVGFIGLTQWVAHVMTRLLPPLDPAKNPLRPHHLDPSALATPSLAISCAAREALHQADLVETML
NGLKTVWQTDDQRLAAELRAMDDQVDSLYSAIKYYMTKISRSSLDENEGRRWTEIISFTINMEQIGDLVE
RVLQDVEDKKIKKGRKFSHAGLQEINEMHDHLVANLRLAMSVFLTSNARDAQKLLEEKTRFRELELAYSA
THLNRLADNTIQSIETSSLHIDIISDLKRINSLLCSVAYPVLEANASIRPLQSQGEAAAPQGERQ
>gi|319761882|ref|YP_004125819.1| metallophosphoesterase [Alicycliphilus denitrificans BC]
MNSTPYTFLVQITDLHIREPGRLAYGRIDTAPYLRRTVDSVLALRQKPDAVVITGDLSDFGREAEYAHLA
GLLAPLGDLPVYLLPGNHDERAQLRRSFARHAYLQGGGEFVQYSVRVGPLRLIALDTVEPGQSHGTLCAQ
RLAWLERELAACRDEPVVIAMHHPPFRTLIGHMDRIGLLEGAAQFEAIVARHANVERIICGHLHRAIDVR
FGGTIASTCPAPGHQVALDLQPDAPSAWMLEPPAFRVHAWDGQRLVSHLAAAGIFEGPYPFHENGMLID
>gi|319761883|ref|YP_004125820.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MELERIPVEIDHCSKTYADGTRGLQPTSLHVEPGEVLALLGPSGCGKTTLLRLIAGLETLDPGGRILFGE
QDVTHRPVEQRGVGMVFQSYALFPQMSVAANIGYGLRIRGVSAAEERRAVGELVELTRLTGLEAKRPGEL
SGGQRQRVALARAVAVRPRVLLLDEPLAALDAKLKEQLREELAELLRRLHITAIHVTHDQQEAMAIADRL
AVMRAGSIVQVGHGEDLYRAPAHPFVAEFLGRVNRIERSPESLARGVLTIGGATLTCPPALDQSALLVRP
EDIQIGPRQDGWGVARVEQRSFLGDRVQLRLSAAGVPGTLLADAARDTPYRSGDEVGIRIDPQRLMSTAE
ASA
>gi|319761884|ref|YP_004125821.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MRQPTHNRAPFLFAVTALTSLFMIAPMLLSVLAGLVNNYSVGIKSGFTLRWLQEVWDVYGGTVGWSLGIA
AASVAATAAIGVPCAYALARSRSRLARAFEELLTLPVAVPGLATALALILAYGQIAAFRQSFAFILVGHI
VFTLPFMVRTVASAFQRNDLVALEEAARTLGASFPQRFLGVLVPAVFPAIVAGGLMVFTLSVGEFNLTWM
LHTPLTRTLPVGLADSYASMRIEIGSAYTLVFFIVILPVLWALQALAQLMQKRYGT
>gi|319761885|ref|YP_004125822.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MSPRQRLLLAGCAAPASAFFLAFWLLPVLRLLALPAEKGWGTYFVVLTDGRYMESMLNTVLLSVAVTLAT
LVIGATVGIYLARRSFFGKRLLLALLTLPLSFPGVIIGFFVILLGGRQGLVADLSSQLFGERITFAYGLL
GLFLAYLYFSLPRAIATYAAAAEAMDLQLEEAARSLGASRLRIVRDVWLPELAPTTVACGAILFATSMGA
FGTAFTLASKFEVVPITIYNEFTNYANFALAASLSIALGLVTWLALFLTRQFGSGQAMR
>gi|319761886|ref|YP_004125823.1| extracellular solute-binding protein family 1 [Alicycliphilus denitrificans BC]
MTSTLQRFARIGVLAAAGLAATGAWAQTAICYNCPTEWADWGTQLRAIKARTGITVPADNKNSGQALAQL
VAEKGSPVADVTYLGVTFAIQAQKDGVVAPYQPAGWKDIPDGMKDPAGNWFSIHSGTLGFMVNVDALKGK
PVPKSWADLLKPDYKGLIGYLDPASAFVGYVGAVAVNEARGGTLANFAPAIDYFKALQKNEPIVPKQTSY
ARVLSGEIAILLDYDFNAYRAKYKDRANVQFVIPAEGTVVVPYVMSLVNKAPHPAEARKVLDFVLSDEGQ
AIWAKAYLRPVRAGAMPKEVQAQFLPASEYARAKTVDYAGMAAAQRDFSDRYLKEVR
>gi|319761887|ref|YP_004125824.1| periplasmic binding protein/laci transcriptional regulator [Alicycliphilus denitrificans BC]
MPKEPLNIHNVATRAGVSAATVSRAFNFPDKVAPATRDLVERAARELGYQPNASARTLRTQRSRVLGVVL
PTLLNPVFAECLQGISQAAAASGYAIVPVMTSYEETQEQQAVAQLLAANVDGMILVVSSPSDSRALERLR
GAGLPYVLAYNAHPGHPCISVDGEAASAEAVARLAALGHRRIAMVSGTLAASDRAQQRYRGYLRGMAAAG
LQAPPLVEVPFVATAVEALSRYLQTPTRPTALFCSNDLLAIRSMRAARLTGLSVPQDLAVMGFDGIAIGQ
DLTPALSTIAQPNHDIGRHGVELLVQSIARGSPPGAGDSLCLPYRFCGGESCAAAAGPAA
>gi|319761888|ref|YP_004125825.1| lipoprotein signal peptidase [Alicycliphilus denitrificans BC]
MARGNGNGRASLWPWLAWAVLLVIADQFTKTLILGYYRLGDATYVTSFFNIVRAHNTGAAFSFLADAGGW
QRWLFTGIAVATAAFILWQLRAHPGQKLFCFALSSILGGAIGNVVDRLQHGYVVDFLDFHLRGWHFPAFN
VADAAITVGAACLILDELLRVRRER
>gi|319761889|ref|YP_004125826.1| isoleucyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MSESAPKNAPASAYRATLNIPDTPFPMRGDLPKREPLWVKEWDEQGTYKKLRDARRGAPKFILHDGPPYA
NGQIHIGHAVNKILKDMIVKARQLEGFDALYTPGWDCHGLPIENAIEKLHGRNLPRDEMQARGRAFATEQ
IAQQMVDFKRLGVLGEWDNPYKTMNYASEAGELRALKKVMERGFVYRGLKPVYWCFDCGSSLAEFEIEYQ
DKQSQTLDVMFPAADPEKLAAAFGLPALSKPAFAVIWTTTAWTIPANQALNVNPELEYSLVDTERGLLVV
ASALVEKCLERWGIAGRAVATAKGEKLDHINFRHPLAHVDKGYDRLSPVYLADYATAEDGTGIVHSSPAY
GVDDFQSCVANGLKYEDILNPVQGNGQYAQDFPLFGGQPIWKAVPVIIDALKVAGRLMGTSGITHSYPHC
WRHKSPVIYRAAAQWFVRMDEGEGVFTDPAQKPAKTLRQIALEAIEHTRFYPENGKARLRDMIAGRPDWC
ISRQRSWGVPIPFFLHQDSGELHPRTMEIIDQAADIVERGGIEAWSRVTAEEILGAEDAKHYTKSTDILE
VWFDSGSTFWHVMRGTHAGMHHDEGPEADLYLEGHDQHRGWFHSSLLLASAIFGRAPYRGLLTHGFTVDG
QGKKMSKSLGNTVSPQQVSGKLGAEIIRLWCAATDYSGDLAIDDKILARVVDAYRRIRNTLRFLLANVSD
FDPATDAVPFGEMLEIDRYALTRAAELQQDILAHYKVYEFHPVVARLQLYCSEDLGGFYLDVLKDRLYTT
AAKSPARRSAQTALYQITHAMLRWMAPFLSFTAEEAWKIFGQSESIYLETYQTIPAADEALLAKWERLRQ
IRDAVNKEIENVRAAGTVGSSLQAAVTLAAAPEDHELLASLGDDLKFVFIVSTITLIAGSALQISVTASS
DEKCERCWHYRADVGADTAHPTLCGRCTSNLYGAGEPRAHA
>gi|319761890|ref|YP_004125827.1| riboflavin biosynthesis protein ribf [Alicycliphilus denitrificans BC]
MKIFRGFHHPQVAPACALTIGNFDGVHRGHQAMLALLNNEAEHRGVQSCVLTFEPHPRDYFAGLHRRPEL
APARIGTLRDKLSELARCGVQQTVVLPFNERLACQSPQAFIEDVVVRGLGARYLLVGDDFRFGSQRAGDY
AMLDAAGPAHGFEVARMNSYEVHGLRVSSTAVREALAAGDMQEAARLLGRPYAISGHVVHGRKLGRQLGR
SAASGAHQDGFRTLNLRFAHWKPAASGIFAVLVHGLHDQPLPGVANLGVRPSLDPRDVNGGRVLLETHCL
DWPAHLGAEGAYGKIIRVELLHKLHDELKYDSLAALTAGIAKDCEDARAYFASTQHAETRRQTTRDRI
>gi|319761891|ref|YP_004125828.1| hnh endonuclease [Alicycliphilus denitrificans BC]
MKVLKLSAQGLPQSWISLEQAVTHYAAGEVRWEIGAQVALFRGGHNAITGEQSQIAVSSIIGTRGVPHIN
PFDLRPSLTNAKLFVRDRNICAYCGGHFPEHELTREHIVPYASQGADHWMNVVTACRSCNHRKGPRTPEQ
ARMPLLYAPYVPSLWEDFILRNRRILADQMEFLMAHVPKSSRLLS
>gi|319761892|ref|YP_004125829.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDFDFSDDQQSLRDAVRKWVDKGYAFERRRAIVAAGGFDRAAWGELAELGLTALTVPEAYGGLDQGPIDA
MVAMEELGRGIVLEPLAQAFIAAGVLSQHAPEAVQAAWLPRIAGGEALVVLAHQERKARYRLDVCEAGAG
KTPTGHALTATKSIVPAGDQADAFLVPAKLDGRIALFLVERNAGGVATRGYGTQDGSRAAEVRLAPAPAT
LVAADGLAALELAVDIGIAAACAYAVGVMEQTCAVTFDYLNQRRQFGVPIASFQALRHRAADMKMQLELA
RSMSYYASLKLGAPRDERRRALSRAKVQLGQSMRFVGQQAVQLHGGIGVTDEYIVSHYFKTLTQLEMTWG
DTLHHLGEVSARMQDTAGVFA
>gi|319761893|ref|YP_004125830.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDLAFTPEEQAFREEVRAWVRANLPAHIAHKVHNALRLTREDMQGWARILGKKGWLAFGWPKQFGGPGWT
AVQKHLFEEECAMAGAPRIIPFGPVMVAPVIMAYGTPEQQKRFLPGIASGDVWWSQGYSEPGSGSDLASL
KTRAERKGDKYIVNGQKTWTTLGQYGDWMFNLVRTSSEGKPQTGISFLLIDMKSPGVTVRPIRLLDGECE
VNEVFFDNVEVPADQLIGEENKGWTYAKLLLSHERTNIADVNRSKRELERLKRIAKAEGLWDDQRFRDQI
ALLEVDIVALEMLVLRVLSAEKSGKNPLDIAGLLKIKGSEIQQRYAELMMLASGPFALPLIQEAMDAGWQ
GDFPGGAPANAPLASTYFNLRKTTIYGGSNEVQRNIVAQTVLG
>gi|319761894|ref|YP_004125831.1| hypothetical protein Alide_1182 [Alicycliphilus denitrificans BC]
MPFDPRQQPLAPVQARVLATLLEKARTVPDSYPLTLNALVTGCNQKTSRDPVMQIADAEAQEALEGLRRM
SLAVEINSQRATRWEHNFPRGVGVPEQSAVLLGLLMLRGPQTAGELRINAERWHRFADISSVEAFLEELQ
ERGDEKGGPLVVLLPRAPGAREPRWAHLLCGPVDVQALQAAAGAGAPAGPALQARVEALEAEVAALQATV
RRLCAELGIDAPLSPPGQG
>gi|319761895|ref|YP_004125832.1| phosphoribosylglycinamide formyltransferase [Alicycliphilus denitrificans BC]
MKNIVILISGGGSNMAAIVRTAQQQDWARTLGARVAAVVSNKADAKGLAFAREQGIATEVLDHRAFDSRE
AFDAALAEVIDRHDPAVVVLAGFMRILTPGFVARYAGRLVNIHPSLLPAFTGLHTHQRAIDAGCKFAGCT
VHLVTAELDVGPILEQAVVPVLAGDTADTLAARVLTQEHVIYSRAVAGLLQKQ
>gi|319761896|ref|YP_004125833.1| fmu (sun) domain protein [Alicycliphilus denitrificans BC]
MHPKALLDACAELVRLTLTFEHPADAVVSRYFRDHRALGPRERATLAETAYAVLRRKPLFEQLARSGSGP
KERRLAILGFASQLDEQARRADPSARRGPRDFLKSALTAQEKDWLDACDGVREDELLEPQRHNLPQWLAA
PLKAQLGDEFWALAASLQEQAPLDLRVNTLQAKREDMRKELAQAGVQAAPTPYSPWGLRVQGKPALSRLD
AFARGALEVQDEGSQLLALLLDAKRGEMVVDFCAGAGGKTLAIGAAMRNTGRLYAFDVSGHRLDALKPRL
ARSGLSNVHPAALAHERDERVKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWRQGPQAVQELAAKQTAILE
SAARLVKSGGRLVYATCSMLPEENEAIAEAFGAAHPDFAPLAAGELLAQLKVEQAAGLCSGGDDGMRYLR
LWPHRHQTDGFFAAVWQKK
>gi|319761897|ref|YP_004125834.1| ribosomal protein l33 [Alicycliphilus denitrificans BC]
MAAKGGREKIKLVSTAETGHFYTTTKNKKTMPEKMSIIKFDPKARKHVEYKEAKLK
>gi|319761898|ref|YP_004125835.1| ribosomal protein l28 [Alicycliphilus denitrificans BC]
MARVCEVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDKNGIDSVLAD
MRARGQA
>gi|319761899|ref|YP_004125836.1| thioredoxin reductase [Alicycliphilus denitrificans BC]
MSTTQHAKVMILGSGPAGYTAAVYAARANLDPVLITGMAQGGQLMTTTEVDNWPADVNGVQGPELMQRFH
EHAERFKTRIVFDHIGKVDLSRRPFTLTGDSGEYTCDALIIATGASAKYLGLPSEEAFMGRGVSACATCD
GFFYRDQDVCVIGGGNTAVEEALYLANIARKVTLVHRRDKFRAEPILVDKLMERVAAGKIELKTFFTLDE
VLGDASGVTGIRIKHTGDGHTEDIALQGCFIAIGHAPNTDIFQGQLAMENGYLITQGGLKGFATQTSVPG
VFAAGDVQDHVYRQAITSAGTGCMAALDAQRFLEQQ
>gi|319761900|ref|YP_004125837.1| cell division protein ftsk/spoiiie [Alicycliphilus denitrificans BC]
MTYSLNTLNASAAGRSAPRSAAARFGHEIGLVLGLLALVFWLLALVSYSAQDAAWSTSGAGDGRQLANWV
GRLGAWLADGSYFVLGFSVWWCVAAGVRAWLSSLARWMRGGEGGAAAQGPWLRRAMFWGGLVVLMCASTA
LEWSRLYRFEALLPGHAGGMLGYVTGPAAVKWLGFTGSGLAGVVLVVLGAALVFRFSWGHLAERLGARID
ALVQSGRAQREKAKDVAVGRRAAREREEVVQEERHEIEVQHPQPVHIIEPVLTDVPQSTRVVKERQKPLF
SEMPDSRLPQVDLLDAAQARQETVSPETLEMTSRLIEKKLKDFGVDVTVVAASPGPVITRYEIEPATGVK
GSQIVNLAKDLARSLSLVSIRVIETIPGKNYMALELPNAKRQTIRLAEILGSQVYHDAKSLLTMGLGKDI
VGAPVVADLAKMPHVLVAGTTGSGKSVGINAMILSLLYKAEARDVRLLMIDPKMLEMSVYEGIPHLLAPV
VTDMKQAAHGLNWCVAEMERRYKLMSKLGVRNLAGYNTKLDEARAREESIPNPFSLTPEAPEPLERLPHI
VVVIDELADLMMVVGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDS
RTILDQMGAEALLGMGDMLYMASGTGLPIRVHGAFVSDDEVHRVVSYLKEQGEPDYIEGVLEGGSVDGED
SGFGLEGGEGDGEKDPMYDQAVEVVLKDRKASISYVQRKLRIGYNRSARLLEDMEKAGLVSGLTASGQRE
VLVPARGE
>gi|319761901|ref|YP_004125838.1| outer membrane lipoprotein carrier protein lola [Alicycliphilus denitrificans BC]
MKKPIAAILIAASAQWASADGLKSLEQFMAAAHSGRADFTQTVTAPAKDGQAQRPKLSSGSFEFQRPGRF
KFVYKKPFEQTIVADGKTLWLYDADLNQVTERPQAQALGSTPAALLTSAPDLAALRADYQLQSAPEQDGL
QWVLATPKASEGQLKSVRVGFEGDRLAALDIVDGFGQRSQIRFSGMQINPALPAGTFQFKPPAGADVLRP
>gi|319761902|ref|YP_004125839.1| ubia prenyltransferase [Alicycliphilus denitrificans BC]
MPLPPASSALPAPPAPPDWRTLLRMTRPGSLLLTVAACLLGMAFALACGCGFDPLRAAATLALAVTAHAG
ANVLNDYHDALSGADAANQEGLFPFSGGSRLIQQGLVSAADTARWAAVLLLLLVVPAGLLLALHSGGGLV
LIGAAGLFLAWAYSAPPLALMARGLGEVAVALAWWLVVLGADYVQRRQFFVIPAATAASFALLAANILLA
NGFPDAAADARVGKKTLVVRLGARRAAWAYLLIALLAHGWLTLAVWLLIPPARALWGLASLPLSLAAGAL
LLRHAGQPQRLRPAIVLTIAAALVHALAIAAALASMAR
>gi|319761903|ref|YP_004125840.1| uracil-DNA glycosylase superfamily [Alicycliphilus denitrificans BC]
MMTPANEPLAALLGRVRACTICAAHLPLGPRPVLQAAAGARILIAGQAPGRKVHASGIPFDDASGARLRA
WLGLSPEQFYDPALVAILPMGFCYPGPGPSGDAPPRPECPPAWRAPLLARLPHIALTVVLGQYALAWHLP
QSPRQVTRAVQDWQRHWPHTVVLPHPSPRNNGWLARHPWFEAELLPQVRARVAAVLAQAG
>gi|319761904|ref|YP_004125841.1| aaa atpase central domain protein [Alicycliphilus denitrificans BC]
MKPAASTHQPLAERLRPRTLGEVVGQQHVLGPGMPLRLAFESGRPHSCILWGPPGVGKTTIARLMAEAFD
AQFISISAVLGGVKDIRDAVQLAESAAGGLMPQRTIVFVDEVHRFNKSQQDAFLPHVESGLFTFVGATTE
NPSFEVNSALLSRAAVYVLQPLTSDDLKRIVVRAQDIQALPAIENEALERLIAYADGDARRLLNTLETLS
VTAEQAKVETITDAWLLQVLGERMRRYDKGGEQFYDTISALHKSVRGSDPDAALYWLVRMLDGGADPRYM
ARRIVRMAWEDIGLADPRAMQICNEAAQTYERLGSPEGELALAQAVLYLAVAPKSNAGYMAYNKARAFVK
QDGTRPVPLHLRNAPTRLMKELDYGKGYRYAHDEEGGFAAGESYLPEGMEPPGFYAPVPRGLEIKIGQKL
EELRARNAAADAPPTPD
>gi|319761905|ref|YP_004125842.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MDILLQQIINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGLMQDAMPGAPGWLML
LLATLVACVVAATLNFAIEKVAYKPLRNSPRLAPLITAIGMSILLQTLAMIVWKPNYKPYPTLLPAAPFQ
VGGAVITTTQILILGVTVVALASMVWLVSYTRLGRAMRATAENPRVAALMGVKPDMVISATFIIGAVLAA
IAGIMYASNYGTAQHTMGFLPGLKAFTAAVFGGIGNLAGAVVGGLLLGLIEAIGSGYIGVLTGGVLGSHY
TDIFAFIVLIIVLTLRPSGLLGERVADRA
>gi|319761906|ref|YP_004125843.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MKNDKIRWIAGAVALLVLPLVLQYFGNAWVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGAYM
FGLLASPHLTENFAWFAQHFPDGMHLSLWAVIPLALVLAATTGVLLGIPVLKLRGDYLAIVTLGFGEIIR
IFMNNLDHPVNLTNGPKGLGQIDSVKVFGLDLGRRLELFGYDINSVTLYYYLFLALVLVTIVICYRLQDS
RIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASFGGVAGAMFGAFQGFVSPESFSLMESVMIVAMVV
LGGLGHIPGVILGAVLLSALPEVLRYVAGPLQAMTDGRLDASILRQLLIALAMIIVMLLRPRGLWPSPEH
GKSLAQKS
>gi|319761907|ref|YP_004125844.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MADTSKEAVLKVAGISKRFGGLQALSDVGITIGRGQVYGLIGPNGAGKTTFFNVITGLYTPDSGTFELAG
RPYEPTAVHKVAKAGIARTFQNIRLFADMTALENVMVGRHIRTHSGLFGAVFRTKGFRDEEAAIRRRAQE
LLDYVGIGRFADYKARTLSYGDQRRLEIARALATDPQLIALDEPAAGMNATEKVQLRELIDRIRNDDRTI
LLIEHDVKLVMGLCDRVTVLDYGKQIAEGTPAEVQKNEKVIEAYLGAGGH
>gi|319761908|ref|YP_004125845.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MAEKSNKVLLQVKGLKVAYGGIQAVKGIDFEVREGELVSLIGSNGAGKTTTMKAITGTLSFVDGDIEYLG
KSIRGRGAWDLVKEGLVMVPEGRGVFARMSITENLLMGAYTRNDKAGIAADVEKMFTIFPRLRERRDQLA
GTMSGGEQQMLAMGRALMSQPKVLLLDEPSMGLSPIMVDKIFEVVRDVYALGVTIVLVEQNASRALAIAD
RGYVMESGMITMTGAGQELLSDPRVRAAYLGE
>gi|319761909|ref|YP_004125846.1| hypothetical protein Alide_1197 [Alicycliphilus denitrificans BC]
MAGGRLRPIWLIIPAMLHTLQSLPVPLQTVLLLAASNVFMTFAWYGHLRNLATAPWYMAALASWGIALFE
YLLQVPANRIGHAQFSVGQLKIMQEVVTLAVFVPFAVFYMNEPLKWDYLWAGLCLVGAVYFIFRGG
>gi|319761910|ref|YP_004125847.1| ompa domain-containing protein [Alicycliphilus denitrificans BC]
MQSTLRFLLCALVLGGGATAGLAQMRAAQSDPSLLPGVSRGYVGLSGGISKYDLRSGTGGFIFDDSDRAI
KLYTGAYFHPNLGLELGYLDLGKARRIGGTTTARGLNLSLVGRLPVSTQLDLLGKVGTIYGRTNTHGFGG
FGVQPGKGDGFGLSYGAGLRWAFTPQWSAVLEWERYRLHFADSKSDVDMTTLGMQFSY
>gi|319761911|ref|YP_004125848.1| phosphate transport regulator [Alicycliphilus denitrificans BC]
MLFGKLLPREGNFFEMFNQHADRIVEAARAFSQLVANYGDTHLRDQYNQDVDNAERAADRVTHEVNRALH
KTFITPIDREQIHSLINTMDDVADLIQDSAETMALYDVRHMTDEITRLTDLSVKCCERVRDAVKLLARIA
DPAVAEAALKTCEEIDRLEGDADRVLRSAMSKLFREETDVRELIKLKAIYELLETITDKCEDVANLIEGV
ILENS
>gi|319761912|ref|YP_004125849.1| phosphate transporter [Alicycliphilus denitrificans BC]
METVQTALWVVVVLVALAILFDFMNGFHDAANSIATVVSTGVLKPTQAVVFAAFFNFVAIFIFHLSVAAT
VGKGIADPGVVDTHVVFGALVGAITWNVITWYYGIPSSSSHALIGGIVGSVVAKSGTGALVASGIFKTVA
FIFISPILGFVLGSLMMVCVAWLFRRTRPSKVDKWFRRLQLVSAGAYSLGHGGNDAQKTIGIIWLLLIAT
GYASASDTSPPVWTIVSCYAAIGLGTMFGGWRIVKTMGQKITKLKPVGGFCAESGGALTLFFATMLGVPV
STTHTITGAIVGVGSTQRASAVRWGVAGNIVWAWILTIPASAFVAAVAYWVSLQLF
>gi|319761913|ref|YP_004125850.1| hypothetical protein Alide_1201 [Alicycliphilus denitrificans BC]
MKNKTIAAWLAFLGGPLGLHRFYLYGFGDMLGWLLPVPTALGLYGIERVQQWGQDDQLSWMLIPLLGFTI
AGCALCAIVYGLMPPEKWNARFNKAAAPDSPAGRTNWFTVFAVTVSLLVGAAVLLASIAFSLQRYFEYQV
EEARKISQ
>gi|319761914|ref|YP_004125851.1| phosphinothricin acetyltransferase [Alicycliphilus denitrificans BC]
MQMPTIRASRDDDLAAITAIYAHHVLHGTGTFEIDPPGIQDMAARRADVLARGLPYLVAEEDGRVTGFAY
CNWFKPRPAYRYSAEDSIYVADHARGRGLGRLLLDALAEHAQAAGVRKLLAVIGDSANAGSIAVHRAAGF
TEVGVMRSVGWKFGAWRDIVLMEKPLGAGDTTAPE
>gi|319761915|ref|YP_004125852.1| ribosomal protein s16 [Alicycliphilus denitrificans BC]
MVVIRLSRGGSKGRPFFNIVVADKRVRRDGRFIERLGFYNPSAKGGEESLRIAQDRLTYWKSVGAQSSPT
VDRLVKQAAAKQAA
>gi|319761916|ref|YP_004125853.1| 16S rRNA processing protein rimm [Alicycliphilus denitrificans BC]
MPQPPALEPAELPSDAVEVGRIADAWGVKGWFKVLPYSSDPEALFASRSWFLQPAQKGGKSFFSGTVLLP
IRQARTHSDAVVAWAHGVDDRDAAEALRGARIFVPRESFPATSDDEYYWVDLIGLAVVNREGIALGTVSE
LLPTGPQTTLVLSYEHEGKPRERMIPFVSAYVDKVDLAGRRITVDWQPDY
>gi|319761917|ref|YP_004125854.1| tRNA (guanine-n1)-methyltransferase [Alicycliphilus denitrificans BC]
MRFDVITLFPELFAPFLACGVTRRAYASGQVQVHLWNPRDHAEGNYRRVDDRPFGGGPGMVMMAEPLARC
LAAIRADRAEAEGAKAPLVLFSPVGRRLDHAAVQGWSAGVGAVLLCGRYEGVDQRFIDAHVDVQVSLGDF
VLSGGEIAAMALLDAVARLQPGVLHDDDSHQLDSFNPALDGLLDCPHYTRPEQWQGLGVPAPLLSGHHAQ
IERWRRDQRLLVTARHRPDLLEAARARGQITRADEDLLARSRALL
>gi|319761918|ref|YP_004125855.1| ribosomal protein l19 [Alicycliphilus denitrificans BC]
MNLIQILEQEEIARLNKAIPEFAPGDTVIVSVNVVEGSRKRVQAYEGVVIAKRNRGLNSGFTVRKISSGE
GVERTFQTYSPLIAKIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRVKVAAADAA
>gi|319761919|ref|YP_004125856.1| nudix hydrolase [Alicycliphilus denitrificans BC]
MSSLSSLPDFDPRAAPLVGVDDHLPAVPPAAQSPDALRRRFAAPPPWNPEIVRERKFVERKPAHAAVLLP
IVLRERPTVLLTERTDHLSTHKGQVAFPGGRSDPEDRDAAATALREAHEEVGLESSRVEVLGSLPIYVTG
SSFIVTPVVGLVQPGFALQPNPHEVADVFEVPLAFLLDPAHHERHAFEWQGLRREWFAMPYQDGDRQRYI
WGATAAMLRNFYRFMAA
>gi|319761920|ref|YP_004125857.1| cobalamin biosynthesis protein cbib [Alicycliphilus denitrificans BC]
MSFFAILFALLIEQARPLARSNPIHAGLRAWALSVSRNFDAGQAQHGWVAWALAVLVPPLFVLAVHWALL
HFIGWPLALAWNVAVLYITLGFRQFSHHFTGIRDALEDGDAAEARARLARWRQVDASELPRSEIVRHVLE
YSVIAAHRHVFGVLAWYSVLAALGLGPTGAVLYRLAEFVSRYWGSRSRVVTSHPPSPSLQRASERAWTVI
DWLPARLTALSFAVVGSFEEAIEGWRFHAQRFPNDNDGVVLAATAGAINVRLGGEALRSRSDAAAPQGLE
VDADIGDSVSTPGREPEVGHLRSVVGLVWRSVVVWMLLLALLTLARLLG
>gi|319761921|ref|YP_004125858.1| histidinol-phosphate aminotransferase [Alicycliphilus denitrificans BC]
MTVPSLCSPVVGRLEPYVPGEQPRIAGLVKLNTNENPYPPSPRAVAAIEAAAREGLQLYPDPQSLALRET
IAAHHGLEAGQVFVGNGSDEVLAHAFFAFFQHAGQPLLMPDITYSFYRVYCRLWGIAPELQPLDEGLAID
VERIAARAAEGACAGIVLANPNAPTGMGLPLSQIERLLAACPQRVVLVDEAYVDFGGESAVSLVPRYPNL
LVVHTLSKSRSLAGLRVGAAFGQRPLIDALERVKDSFNSYPLDRLAQAGARAAYEDVAYFDETRRAVMHS
REGLALALEDLGFEVLPSQANFLFVRHPAHDGARLAAALRERAVLVRHFARPERIAQYLRISVGTPAQCD
ALVRALQAIV
>gi|319761922|ref|YP_004125859.1| sulphate transporter [Alicycliphilus denitrificans BC]
MASPTRMLSFRPRLADALRGYDRARFMQDFSAGLTVAVVALPLAMAFAIASGLPPEAGLFTAIIAGFLIS
ALGGSKVQIGGPAGAFIVIVYGIVQQYGVANLIIATALSGVLLFLMGVLQLGTLVRFIPVAVVIGFTNGI
AVLIALSQVKDFLGLAIEKMPGDFFGMLGALYQHLSTLNPWAAGVSAVSLALVVGWQRWLSAWRHPWAGT
LARVPGSIVALVLATAVVALSGMPVETIGCRFGGIPAGLPAFTLPDFSWESARHLLMPTITLALLGSIES
LLCARVADGMVGDRHDPNQELMAQGIANFVTPFFGGMPATGTIARTVTNVKSGATSPVAGMVHALALLLV
MLAAAPLAASIPLATLAAILMFVAWNMGEWREFTRLKTYRLPYRVTLVSVFLLTVIFDLTVAVEFGIFAA
CLTFIYRISSLSRAERIDAADMPVLAGHDGQVQVWRLYGALFFGATKLLEAMEDHLPARALVLDLKNVIY
VDSTGAEALEHLSHACATRGVRLIVSGLISQPLDIARRTGLYERLRPDLQPDVASAAAAAVA
>gi|319761923|ref|YP_004125860.1| ribosome small subunit-dependent gtpase a [Alicycliphilus denitrificans BC]
MAEAGARLEGLVVASHGRHCVVESADGQRRICHPRGKKSQAVVGDRVLWQPAAPGQGRGQGDEGTIERVQ
ERRNLFYRQDEVRTKSFAANLDQVLILIAAEPVFSESQLARALIAAEAAQITPLIALNKSDLVEPFARAW
ERLWPYRHMGGEQDTKHHYRVLPLSLTESGPVDRDALLPLLAGKTTLVLGPSGSGKSTLVNLLVPHAKAQ
TGEISQALNSGRHTTTSTQLYWIDEARTTALIDSPGFQEFGLRHLAPADLARCMPDIAAHAGECRFYNCT
HLHEPGCAVRAQVETDDSPGTISASRYRIYGELFAELSEAPRY
>gi|319761924|ref|YP_004125861.1| transcriptional coactivator/pterin dehydratase [Alicycliphilus denitrificans BC]
MTSMFPKKDWSGHTRRALTATEVVARLAELQGWMLCGDGADVAIEKTYRFADYHETMAFVNAVAFIAHAQ
DHHPDLSVHYGRCVVRLNTHDVGGISATDIDCAARIDALLTP
>gi|319761925|ref|YP_004125862.1| ste24 endopeptidase [Alicycliphilus denitrificans BC]
MLTPSTLTTLVFATLLLAGLALRLWLASRQIRHVARHRGAVPAAFAGRITLAAHQKAADYTIAKARFGLL
EMALATAAVLGWTLLGGLDALNQALLAWLGGGMVQQLALLAAFALVSGAIDLPAQLYQTFRLEQRFGFNQ
MTPRLWLADLLKSTLLGAVIGLPIAALMLWLMGAAGRLWWLWAWGAWMGFNLLLMVVFPIFIAPLFNKFQ
PLGDESLKARVTALMQRCGFAAKGLFVMDGSRRSAHANAYFTGFGAAKRVVFYDTLLKQLAPGEVEAVLA
HELGHFKHKHIARRLAGMFAISLAGFALLGWLSARGWFYTGLGVQPNLMLPGVPGSAPNDGLALLLFLLA
APVFTVFLTPLLARISRRHEFQADAYAAAQANGADLASALLKLYQDNASTLTPDPVYARFYYSHPPATER
LARLPVTMQP
>gi|319761926|ref|YP_004125863.1| exonuclease rnase t and DNA polymerase iii [Alicycliphilus denitrificans BC]
MNAEVYGDNSGMSETATPNAPVLAKSDQNLVWLDCEMSGLNPETERLLEIAVVVTGPGLEPRVEGPVLVI
HQPDTVLDAMDAWNKGTHGRSGLIDKVRASTLTEADAEQQIIDFLSRYVPKGKVPMCGNSIGQDRRFLVK
YMPRLEAFFHYRNVDVSTLKELARRWKPEAYDSFKKAQRHTALADVHESIDELVHYRQHLLAL
>gi|319761927|ref|YP_004125864.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MQFPSLKSTLVAAAALACAAGALAQEQIVKIGHSGPLSGPNTFAGRDNDNGVRLAIEELNARKISVGGKT
LKFELVSEDDQCDAKTGVAVAQKFVDSGVRYVMGPYCSGVTIPASREYDKGGVMVSTVGTNPKITQAGYK
NLFRIVASDVQAGASMATYAANVLKAKKVAVIDDRTAFGQGLADEFAKEAQKLGMTVAGREFTTDKATDF
MAILTNIKAKQPEAIFYGGYAPQAAPMARQIKQLGINAKLLGGDTLCSPEMPKLGGDAVNGVVYCAYAGM
LMESDAGARAFQDKFKKRFNQAPDVYGPFYYDQVMNIGEAMQKSGSIDVNKVGAYMHQHTYKGVMGEYAY
DDKGNRVKAPVVVMTFEGGKAKPLASY
>gi|319761928|ref|YP_004125865.1| dead/deah box helicase domain protein [Alicycliphilus denitrificans BC]
MTENMQLQGDCAPADSSLPSSNPVAAAALPEGFVRLGLAPELVQAVADLGYTQPTAVQEKAIPLAMGAAD
VAGRFIDLMVSSQTGSGKTAAFLLPVLHTLIQQQADADAAARAEFERAAAEAAARGEAAPKRPKRKNPTH
PRNFKAAAPGALVLCPTRELAQQVAHDAIELVKHCKGLRIANVVGGMPYQLQIARLQNANLVVATPGRLL
DLQRSMQIKLDQVQFLVVDEADRMLDLGFSDDLAEINQLTSERKQTMMFSATFAPRIQQLAMRVMHEGGA
SVKKVQIDTPQEKHANIKQMLYWADNAQHKRKLLDHWLRDASIGQAIVFASTQVECDGLANDLQQDGFSA
VALHGALSQGLRNRRLMALRNGQVQILVATDVAARGIDVPSITHVFNFGLPMKAEDYTHRIGRTGRAGRD
GLAVTFAEFRDRRKIFDIEGYSRQQFKAEVVAGLEPTQRFPQGGRPDFGGRGREGGRGRDQRFGGGGRGH
GGDRAGYGGRRDGDGYGRKSGFGETARFGDAPRFSETPRFGEASRFGRGEGAAPRGDFGRKAEFARGGFA
KPQGAGKPFTPHDARKRPAPRGGR
>gi|319761929|ref|YP_004125866.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MLPPVSSNTDFEHMFEIAPVSLWLEDYSDVRRLLMQWRDQGVVDVEAHLRENRECVRAYGAGIRLLRVNQ
RTLELFAAPDQATLEASLDRVFRDDMYESAIAEVQQLWSGAPEFSNQTVNYALDGRRLDVRIRGRILPGY
EQCWSRVLVSLEDVTEQVQSRLRLQRSEEYARGLFEHSPVSLWVEDFSAVKRLLDEVRMQGIYDFRTFLK
VHPEFVQRCMREIRVLDVNHLTLEMFGAESKQALLAGLDRVFRGEMHDSFSEQLIDLWDGKLFQQREVVN
YNLSGEPIHIHMQFAVLEERSHDWGMVLLSLVDITARKKAEAYLEYLGKHDVLTGLRNRAYYVEEMSRLA
RKGPWPVAVVAIDLNGLKAINDEQGHTAGDAMLRRVGEVLAKAVDAPICAARIGGDEFCVLMPMTDARGA
QAMVDRIGSLLELNNQFYPGQALSLSMGVAIAQSGEQIEAAVHRADQAMYAEKARYYAAMGVDRRRD
>gi|319761930|ref|YP_004125867.1| drug resistance transporter, bcr/cfla subfamily [Alicycliphilus denitrificans BC]
MHPDAPDLWRGPRWALAILLALLGMVGPFSIDTYLPAFPAISQALAATPVQMQQTLSAYLFAFAFMTLFH
GSLSDSFGRRPVVLWGLAVFTLASMGCALSQSIGQLVVFRALQGLSAGAGIVVSRAVIRDIFPPTQAQRV
MSQVTIFFGVAPAIAPMVGGWLSVHLGWHSVFWFLTGVGMLLWLANWRLLPESLPPQGRQRLHLGHLLRG
YWELGTSPRFLLLALASGVPFNGMFLYVLSAPAFLGDLLGLAPTQFFWFFMTTISGIMGGAWMSGRLAGR
IPPKRQIRHGFVIMLAMGLLNLGANLLFTAHAAWAMWPIGIFSFGWALMVPVVTLLVLDLYPQRRGMASS
LQAFVGSTANGLVAGVVAPLVMHSTVLLALASLLMMGVGLLSWVYLHHRWPEIGRTAAHS
>gi|319761931|ref|YP_004125868.1| hypothetical protein Alide_1219 [Alicycliphilus denitrificans BC]
MQTKQPTTRLAFAAALLLSGLAHAQVSVQDAWVRATVPQQKATGAFMRLTAAQDMRLVGASSPVAGVTEV
HEMKLVDNVMKMRAVPALDLPAGQAVELKPGGYHIMLLDLKQPVAQGGTVPLTLVFEGKDGQRQSQELQA
PVRALGAAAAPAAGHGKHGGH
>gi|319761932|ref|YP_004125869.1| hypothetical protein Alide_1220 [Alicycliphilus denitrificans BC]
MPITMESLRRTRHLARLLLACFAVALGVAMLSPLVHAGGMERVCSATDGPRWVAKGGNDSTADARAHGLE
CALCLPSMLPPATVQALAAPREPAPFAAPAPRQAHVPPLSRAPFPPRAPPVQA
>gi|319761933|ref|YP_004125870.1| cyclic nucleotide-binding protein [Alicycliphilus denitrificans BC]
MTFINVPAGRVAAADCARMQALLAANPLLSGVPEAALAELAQHARPRSHGDGQTLFFEGDAASHCLLVES
GAVEVLRFAACGDERMLHRFGAGDLVAEAAMFMPHGLYPMTARAAGPTRVWRLPRTAVRAACERHPALAL
RLLEALSLRLYRRVNEVDWLTRSNTPQRLATYVLALAGSQGERIELPTSQRQLAARLGVRAETLSRLFAQ
WQARGWIHGESRSWRLCDSNALRRLVPPGADPF
>gi|319761934|ref|YP_004125871.1| tonb-dependent receptor [Alicycliphilus denitrificans BC]
MTSVPTPVCPLPVRVLAHSMACALALLALPAHAQQPAAELPAVTVRADGAGEGTAPLRPSAQAERERLER
VPGGTNLALPQQESRLATLRDALDYQPGIVIQDFFGATDQPRLSIRGSGIQSNPLNRGVLLLQDGMPLNE
ADGSFIIGLIEPRNAALISARRGANTLTPGATTLGGEVDFQSLTGADERGSVRAEAGSFGRKALQGAVGL
QGAQWDGRISVSGDRFDGYRHHSASQREALHANLGFQGAGGFENRTYLSWTDLDFDIPTVVPKDRVRTNP
RGVMGDGNTPQDQLLNVYKRDPRREATQLRLANRSRWGSDALSQELGVYWQDTDDLFNNQTSYAITHSRT
TGAQWQASGGAGGPLAWRAALGWSRSSMDRDLDATNPANGTQMQRFGAYDLTADNLQAQLGADWRLAPAW
TLVGQWGWSRQSRDAASRLDGRALDQQWTFSTPKIGVNWTPAPTVRWWANLSRSQEAPTFWEIVAANVAP
NAPAAASSELVRLKLQRATTFEVGGQGRWGEGTRALHWQLAVYRSQVADELMSTTDESGIKVGTYNYAGG
TRHQGVEAGLSGSWPLGAAGGLEWRGSWTYSDFRFKEGIYAGNRIAGVPRHLINAEVLWRVATGSGTWRV
GPSLRWMPTDTPTDHANTAGSEQDAYALLGFKLEWRSGPWTAYLLADNVTDRRYASSYAIRNQATAAQPG
YLPGLGRNVAAGVTYKF
>gi|319761935|ref|YP_004125872.1| periplasmic component of abc-type transport system [Alicycliphilus denitrificans BC]
MSSFSCLNRRAALRAAGALALGGLPAARAAAAPLPRIVLSGPPAIVSAPLIHMAETNALAAVAAQTRFTS
WRDPDQLRVMALGGKADVLAMPSNVAANLYNRGAGVTLLNISTWGALWIVTRDGARRTLADFRGEEIAVP
FRGDMPDLMLQLLAARQGLDARRDFRVRYVPTPMEAMQLLITRRVRHALLAEPAVSMALRKTQSFPVGLI
APELHRGADLQQEWGRVFQRAPRIPQAGIAAVGAVRAQPAVLAAVAEAYARSVAWCRANPLECGRMVAAR
MDLLTPEAVADAVATSQLDAVPAQRARAEIDFFFQQLFARDPALLGGKLPDDKFFHTP
>gi|319761936|ref|YP_004125873.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MKLLWRLLRGMPAYLWSGWGAAASLLLFVALWELGAGLYGPLILPTPLDTLATLRGLVRAGEAWPELAIT
ARRALTGLLLAAGVGSALGLLAGLSMTASMMARPWVTLLLGMPPIAWLVLAMLWFGAGDGTPVFTVFVAC
LPVVFIGALQGTRTLDHHLKDMARAYRLPWRMRLFDLYLPHVAAYLFPAWITALGSSWKVAVMAELLATS
DGVGAALAVTRSHLDTSASLAWICAVVGSLLVLEYALLEPVKRELERWRSAGGAPPSA
>gi|319761937|ref|YP_004125874.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MTTPPATPPPLLQVRGLHHAYGPTAVLQDIDLDLPAGRIAALVGPSGCGKTTLLHLCAGLLAPQQGRIAR
PEAPVAVMFQQPRLLPWMATLDNIALGLRAQGVPRAQRRERARAAALALGLPEASLAQYPAELSGGMQSR
AALARALVLEPALLLMDEPFSALDVGLRGQLHQLLLARQAQSGMAVLLITHDLMEAVRLADEVLVLAAAP
GRIIARYRPPGEARARGEALVHRCAAQLLQHPEVRAAFGLPEQDAPDAAGTPPDEEGGGAWLQAPHCAVP
RASHGC
>gi|319761938|ref|YP_004125875.1| nnrs family protein [Alicycliphilus denitrificans BC]
MRPFFLLAMVSALGLLGLWGLALGAGLPPPQVAGGPIVWHVHELVFGFAMAGVAGFALTALPEFTGEAGA
SRGQLRALVLLWLLARAGFWASGWAGAAALWLAGAAQVALPLAVAAVLARALRSPAGRAHASFGWALLAL
AGMALGFYADALGGAPGLRWLHATLGVLMLLIVVAASRISMRMVNRAIEQVTPGAPPYLARPPKRHLAAL
CITLATLAQFARPGSALAGWLALAAAAAMFHLMSDWHVGPALWRRRFPLLLYAMYACMALGYGALGLAYL
GALPGTGAGWHLLGAGAVGLGVFVVIAIAGRAHAGLLPDPGPWVPLGGALVLAATALRAAAAVLGWGGIA
LAAAAVLWCLAYGVLLWRVGPGLWRPRTDGRDGCDGPAP
>gi|319761939|ref|YP_004125876.1| tonb-dependent receptor plug [Alicycliphilus denitrificans BC]
MLLTHSFALRRLCRPHPLAVASTAALLCLAGAARAEVVAAAPLPAVTVTATLTEQDARTAPASVTVITAQ
DLAERNAADLLDAVRGAPGITLSARQVGGRKTLALRGLEGKHTLTLIDGRRISASDDVIGHSDYQYGWLP
ISAIERVEIIRGPMSALYGSEALGGVVNIISKKPKDRWIGSVGITGSHAVGSDGASEAGTSIFAAGPLTD
RLRMSVNAEYAHRDAVPEKEDPRYSEIEGRKPRSLGLNAEFDLAPGHVLEAGVTDGKEQRFYDDVSGAKP
YFNRYDLDRRQTHVGWRGEVGGWKTQLRAYRSEFSVRNSRTNGVAPTRPQDMTDDVVDGHASTRFGSHQF
TVGDEWRNEELVNAGLTTGSDDVTHKALFVQDEFALGKNLIATLGLRADHHGIFGSELSPRAYLVWEAGS
ALVVKSGFGHAFKAPTLKQISPNYVGAEGPHTFMGNADIKPETSNSFEIGADWQVSPAWSLRATAFHTEV
KDLITYRLLQQVGPRRIYQYDNVDAARIQGLEAGFTWAITPQLAWNTGATLLRTRDKTTGKRLSDRPSTS
VASHLAWRVAGWDARLGLQYTGSQDSSGYRLPAYTLWNASVGRAWKLNATQSLNLRAGLENMGDVRLAEK
SPNFGYAEQGRRVFVTARLDF
>gi|319761940|ref|YP_004125877.1| cobaltochelatase [Alicycliphilus denitrificans BC]
MTGNHKFRWLLCAALLLLAGAARAASVLFIATGNVPQGKFHQLAEIARPHGLTVEVRYLNSLPADVDAGL
WRGRDAVFFDSYQQDEVRDRLVRALPGLAAPNAWLYDQRPAWGGGLPEAVARRLIDYYASGGRQNYEGFF
ATLAAQLAGGNAMAAAPEPVVFPKTGVYHPRLPGLVTADVHTYLRRQGVDPAAPGRKPIVAISLHQQYIG
SMQTAFIDDMIARVEAGGAAALPFYTPMMGEGGFAKVLQPGGPGQPVLADVLINTQIMLNAEERRGEFEQ
MGIPVIQAMTHRRGDEAEWAASQQGVAIMDVPFYMAQAEYAGVTDIQVASATRKGDEQIMPIAPQSAAVA
AKALNLVKLQRKPNADKQVAVMFWNYPAGEKNLSASFLNVPRSLQSTLAGMAAAGYRTEVPDETHLIILL
QRLLAPAYRGGELEPLLRDGLAALLPVKDYRAWLSSLPQSTQDAIRSAWGAPEKSHWVIRRGGQDFFAIP
RLQLGRITLLPQPGRSGMAPGSQDARAKEKEIYHSTTDLPPHHYLATYLWTRQHNDALVHYGTHGTQEWL
PGKERGLSVYDAPLLALGDIPVAYPYIADNIGEATQAKRRGRATIVSHQTPPFAPGGLHDALTQMHDLLH
QWQAQDEGAVRERMAADLLAAAKKERVIADMGWTEGRVKERFADFVQVLHNHLHELAQTAQPQGLHTLGR
APEELHRLGTVLLMLGKNFWEAAAQHAGVPAADLDEALVGPWDRLERTAPYQLLRRHVVAGESLDGLSPG
LQKALQDARQAYANLGAQGELPGLLAVLDGRYLPTSYGGDPIKSPDAYPTGRNLYGFDPSRVPTRQAWEA
GKQAAENMLAEHKKLHGKLPRKLTFSLWSVETMRHFGMLEAQALWLLGVEPVWDRGGRVTGVKLVEREQL
GRARVDVVLSATGLYRDHFPNVMQQLARAVLLASRARDEADNPVAANSQRIAQKMMVAGADAKAAELAGA
TRIFASESGRYGTGLDDAALATDTWKGKAEGDRKLARLYLDKMQYAYGPDESQWGQAGVAGAAAAGTGKG
GKAVNLYAEHLSGTEGAVLSRSSNLYGMLTTDDPFQYLGGIALAVRHLDGKAPELYISNLRGSGSGRVEG
AAQFLAKELATRQFHPGYIQGLMKEGYAGTLQVLDATNNFWGWTATAREIVRDDQWQEMVDVYVRDKHQL
GLKDWFEAKNPHALAQTMERMLEAARQGYWQADAATVRELKERWRDLAQRFDVRTDNAAFQRYVGAGQGA
AGYGLAAGTPGAAAAAAPAPGAQAAEPPPQADPSPVPPPPPISGMRLEQVREQPRDSAVPAWQALWVALV
LGAVMLGGGWWQRRGRVSSKLAFGA
>gi|319761941|ref|YP_004125878.1| hypothetical protein Alide_1229 [Alicycliphilus denitrificans BC]
MRDQLQSRLEQARAAEQGIAQAALAGATVQQLAERLDRLQTLKREAAQVQIDAAQRIRAQLSAAQYAQLR
QRAQATLAAAPAPAEYALLLPGHLPHLMPFVAQLGASAEHQQSLSRYADEQVRPALRPRLQQAQQLEQEI
GRAVLDGRSAGELAPQLGRLAQLKREAAEIHLRCIAHVRQTLPPEQYARLVALSTAKA
>gi|319761942|ref|YP_004125879.1| hypothetical protein Alide_1230 [Alicycliphilus denitrificans BC]
MSHLLESLMYQASQVFLFPTLVVITVLFVYAFFLLGMFAMQWWQRRKAQGGQPTRGHHLLTWARARPGAS
ADELDVKAHQLLELPRIATRVAPMLGLIATMIPMGPALKGLSDGNLGQVSDNLAVAFAAVILSLIAAAIT
FWVVSVQRRWLAEELVWLQRQGVRTPAAGHMAEAGGEA
>gi|319761943|ref|YP_004125880.1| hypothetical protein Alide_1231 [Alicycliphilus denitrificans BC]
MKFLDETEADDPILSVVNLIDVFLVVIAALLISVAKNPLLSPFSKQDVTVITDAGKPSMEVIQKRGEKIE
KYKASGEIGEGDGEKAGVAYRMKDGSMVYVPETGEGH
>gi|319761944|ref|YP_004125881.1| hypothetical protein Alide_1232 [Alicycliphilus denitrificans BC]
MGRARKDGDPLGLAGTRLSFKHGAFYYRHRDGRWERVGTDVKVAKERAALYNDPQGVYGTVAYWLDQFIV
DCTARVAAGTLSARTLADYTENIVPLKAYFGAMLPEHIEPQHVQAYLDIGAKAGRPVRANREKACLSSCL
SWLMRTGRTTLKVNPCMQASGTKGNPESKRERYVTHAEYIEVYEAAGTQVRLLMELTYRTLQRPESDLLG
WTPAVLARDPHSGARVLSFIQGKTGMRVKIALTERLESLIHRAMGKVPVISQPLVHNRKGEGYTYSGITA
MLTAAIRKVNKAREAKGLPKLESFGFRDLKGKGATDMWLAGHPIEQIQLLCGHSDKATTEKYIKARWNAT
AQPNETAIA
>gi|319761945|ref|YP_004125882.1| hypothetical protein Alide_1233 [Alicycliphilus denitrificans BC]
MIHLPPYLTDAEIAGMCEPLIQPAAQCRRLKAMGLHFVQKPNGRPLVMRTELDRVLGAGRFAGGQDAKVT
APNAAALLQHLGRKGIHGARA
>gi|319761946|ref|YP_004125883.1| hypothetical protein Alide_1234 [Alicycliphilus denitrificans BC]
MKKHPTRHKPDPLCTPVGRALALQALRRDMLDIGLACLAVEHGSEQRALLARLAFMIGIGAELAAALPVP
GDNRAGMHQALAEVVRMACDGCAWDAAWAAQLQLALEISGELMLEHSSHAMRVLPGARALADDIAKGNIR
PDAVAPLEWLEQ
>gi|319761947|ref|YP_004125884.1| hypothetical protein Alide_1235 [Alicycliphilus denitrificans BC]
MKTLVLRLKAVYFDAIRDGQKLEEFRERTPYWRQRLEGRTFDRVVLTKGYPAAGDESRRLVRAWRGYRET
TITHPHFGAAPVEVFAIDVSEAST
>gi|319761948|ref|YP_004125885.1| c-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans BC]
MLGEGVRAAFGLLGIKHRTVCYVEREAPAAAQIARLMEAGALDSAPIWSDLLTFDGTAWRGCVDFIIAGF
PCQDISIAGRRAGLDGKRSGLFFDILDIADACQARGLVLENVAALATATASAVDEAEGTLEERAAARVVG
ELADRGWDAEWLTISASDVGASHGRARWFCLAWRRVGDAKCSRRQQARRRSGEHTGRQLEPGCGAMDDAE
RVELAGQRIHTRPRPEGHGAPDLDGEGPAMSDATGDGRHEGWAESGGQQGRPDAAQRGGAVAYAGQPGLP
YPEQPEQPGNAQPLGRRAVAELHRTPFFAPGPVDPRWPEIVANRPDIAPAVESGVRMLANGMAYLVDESR
THQLRQIGNGVVPLQAAAALVELMRRAEGRG
>gi|319761949|ref|YP_004125886.1| hypothetical protein Alide_1237 [Alicycliphilus denitrificans BC]
MSQSRLSSLAETCISIAIGFVVSLVLTALVLPAYGHAVTFGQNLQITGIFTVASIARGYLVRRAFNRWGR
>gi|319761950|ref|YP_004125887.1| hypothetical protein Alide_1238 [Alicycliphilus denitrificans BC]
MSNSSDQTTLDQYRRMFQAACSALGEISDALGVEPDEGGAEPILEAIEELRATVSQRDELLEFVKFVVSE
WGHDGFGCELEDGESSVIDRARVLIAKAEGNGAPAAVALPADLHELLMHVVCDTRHPERQIQASRMLEQI
GRASPQPPAQEPAEPLPPPGIHAGVHYATFLRREANKHPEPKAGALRNAARMMDVLLAEVRTLRRELVEA
KAQEGGAA
>gi|319761951|ref|YP_004125888.1| hypothetical protein Alide_1239 [Alicycliphilus denitrificans BC]
MNAIHQVLQLRSYRAHLVPQHVNLSDVEDMADAKLLPTIQLKAASATQAEALAHLASGKQVLRVERVEGG
AA
>gi|319761952|ref|YP_004125889.1| hypothetical protein Alide_1240 [Alicycliphilus denitrificans BC]
MNATRTEPRQHCYQRPMDGGYVPAAATTTDHLRAVFAAERERLAAAARPRRKRRQPAAPEVNPQQAQLQL
VA
>gi|319761953|ref|YP_004125890.1| hypothetical protein Alide_1241 [Alicycliphilus denitrificans BC]
MVKKQATERTVAAQARRGMAGAVASDYSLRTKVLLAARDRCDELQDGQAARDDMKRDVLATPDELLSDLL
TAFLSVRIDCALLIPTTAKE
>gi|319761954|ref|YP_004125891.1| replication protein a [Alicycliphilus denitrificans BC]
MPTIPRKLPNASLAEWNEKKPTLYMAREHLERVIRCAPASWQAAIRGRFDNAVPPVMAAVQTARDFLEQP
PEWAQAWDLMQAIADFEDEFGAASLWNLDDQEICTMAKKLAGEADELDALAIGLGATLADRVDSIRLLVR
CVGITEDKPIQGEPAIKRAQDAAWWRRRLRVHVARVVEGGNLGMGLVHKGRGGYVSDDGLRRRGAQLKRN
AEALERTLYRNEAGQVFTLRELAELGTANPINRGGELMTRIRGAEEYADARAHVGLFITLTLPSKFHPMK
LGSGGRVVPNKRFVPGTTPRHGQLWLRDKWAKTRAALARKGVRMYGLRVAEPHHDATPHWHALIWAEDEA
GAQAIEDRIRHYWLSDDGDERGAAENRVNIKRMVKGGAAGYVAKYIAKSVGHLALVEHQDVVDGQQIVMD
FGPTDPKNLQETGAGHRRVDAWAATWGIRQFQTIGMPSVTVWREMRRVTKDQLELFTREGDRDTVRAYQA
CHRHGNMRADWRLFMEAMGGHALPRCRWHLRTAHRTPEAGQVNRYGEEVKVGRVVGLRAQRGRMCGHWLV
SRRIAWTPVIGEGTHAAHGMDAGDAAGQAQGHGNGPQGAQSRAALAAPWTGFNNCTARITHELSRLAFGR
GDHEIEDWCTPEVVAHYRALREAEPCPW
>gi|319761955|ref|YP_004125892.1| hypothetical protein Alide_1243 [Alicycliphilus denitrificans BC]
MKANEMPRLMKLRDEFVRLASAGRFHDAASREWRELPHNWRMALLMVAGIGNDVDSLSTLASRSWREFPE
AERIAMRVVIRTGKRHLGGVTALASKV
>gi|319761956|ref|YP_004125893.1| hypothetical protein Alide_1244 [Alicycliphilus denitrificans BC]
MRVKPFRVAVLACAWVGVGAWANSAAMVCAGMVLALVGLGALVATIAEGGTR
>gi|319761957|ref|YP_004125894.1| hypothetical protein Alide_1245 [Alicycliphilus denitrificans BC]
MSSRNTSRRSTAAQPRTLEAQALHDAHQGHAARLAAIKRMASKLRMLDAYMPAVRAAGITVRGDELNCWG
GLAIYVSGPMFNAQRNATLEKVLREQGMRETRRKENADGSYTVDLKKGHLTVCITVEAHRLPKPQEAAPC
A
>gi|319761958|ref|YP_004125895.1| transcriptional activator ogr/delta [Alicycliphilus denitrificans BC]
MLHSTAEHEALQAAKAERARTRHTGRKLRYEGTRMACPMCAAQCEIRTSLMVSKTMRETAYQCTNVECGC
TFVVGAEILRLLNPGATPDPKVNIPLSTHVRRDMVRVVLDNASEAEHTARFTTPVTGDLFAGGADTS
>gi|319761959|ref|YP_004125896.1| hypothetical protein Alide_1247 [Alicycliphilus denitrificans BC]
MMTTGKQHPTSFKALVDANRAAGRLDEPAPPAEKDAAQKMRNTGMRLTPDEYTQAQQLAAADERSMVRFC
RRMYLRGLESFLAEQGGKH
>gi|319761960|ref|YP_004125897.1| hypothetical protein Alide_1248 [Alicycliphilus denitrificans BC]
MQTQETTVEVSAELQHKLERLRRAYRLPSTTAVLELLISSQIDQSVFAMTGIRPGPRMAIDNTRPDTGRE
G
>gi|319761961|ref|YP_004125898.1| hypothetical protein Alide_1249 [Alicycliphilus denitrificans BC]
MAYDDKEQRREFRHTVRFKKADDQLITVLAARLGVQKATLIQNMALLAAEKELQKIGLGGQQQAAAGGPA
LHC
>gi|319761962|ref|YP_004125899.1| peptidase s24/s26a/s26b, conserved region protein [Alicycliphilus denitrificans BC]
MTTKKDKSTAENERITLQIGQRLKEERKRLGLKATDFESHGGWPASTIYGWESGKASPKSEFYANTQELG
LDLQYIITGRRTAGLPSGPAPAPAGDSDSISLPLLSATGSMGNGNDLITEDVILGEVPVSRKWLALNLPG
SRPEALQLVHAYGDSMGDTLRSGDFAIVDTDYQFADVSGVYVLQANNQLFIKRISRKLDGTHEITSDNPN
VRTVEVLDGSQQVRICGRVVYGWNGRRF
>gi|319761963|ref|YP_004125900.1| hypothetical protein Alide_1251 [Alicycliphilus denitrificans BC]
MYAILGLVFVTLFIWVSDAVTLRNRDKQAGAPVGSIYSYMRPAWRLAQENHQRSKAASTGAARHSSISLP
CTFSFSYADHHGNRARRTVNITGISSSGGQAYLEGFCRSRMDNRTFRVDRIQGDLTDAETGELIPVKRLL
SSVHTRSSMDYKPLAPAPKSSTTKEWKTAVFFAGFRGGKLDELEGLAAAAGWQIRWTISPTVDYVVRNGS
AGKKQLAEADNLGIDVIDEDTFRALL
>gi|319761964|ref|YP_004125901.1| hypothetical protein Alide_1252 [Alicycliphilus denitrificans BC]
MQPPSSVIELAEKHSQEVARFSLAGLEEARKRAHALLVLLLAGGGALGGLGLARADTLPHLPLAAAALAG
AVHWFALAAYVAWQASTTAAVRSWATPGLAVEGYGKWLAYAKAANTEAATLGGPANGVDALQELRLEAVR
NCEQAAHGYRTASSAAYAVVDRAYRLAACMPISAAAAAALALAWGGLGG
>gi|319761965|ref|YP_004125902.1| hypothetical protein Alide_1253 [Alicycliphilus denitrificans BC]
MSTKQFTITAAKALADGVLSLTFADGETMRVQVAPIVRKHPTLRALADPATFRRVKVGEWGGSVQWAGND
ALELAADNLRARAIEQAGGYSHELIMEWMARHGLTLDSAAQALGLSRRMLAYYRSGEKPVPRTVALACLG
WEAEQRMAA
>gi|319761966|ref|YP_004125903.1| hypothetical protein Alide_1254 [Alicycliphilus denitrificans BC]
MPTLARLAQSTITMYAGDHLPPHFHVRMNDGREVLIEIATLEVLRGSVSKRELAEAVAWADANRAALAAK
WKELNP
>gi|319761967|ref|YP_004125904.1| late control d family protein [Alicycliphilus denitrificans BC]
MDAVQAYGYATPVFELTVAGRSITRTVNSRLIQLTLAESRGDEADQLDIEIDDSDGRMAIPSKGEEITLA
LGWAGGRMTDKGTFEVDEIEHSGAPDRLTIRARSADMKRQLRTRAEHSYHGQTLGEIVRTIAARNGLQAK
VDATLAGVRVEHIDQTHESDLHFATRLAKQYDAVCTVKKGRLAFIPINGSRNAAGVELEGRTLTRTDGDQ
HRYHTAERNAYSGVRAYWHDAARAEKRSVLVGTEENEKRLKDTYGSESDALAAARAEMGRIERGKATMEL
TLALGQPELMPQTPLRLQGFKPQIDATPWLVVKITHTLGDGGFTSRLELETGKDAQE
>gi|319761968|ref|YP_004125905.1| p2 gpu family protein [Alicycliphilus denitrificans BC]
MLMSLGLFVFGLDTLAFDTLRRQTAWRHPSNSRVGARPARQFVGPGDDSITLSGVLAPEFKGTARSLDTL
RKMADEGKAWAMVSGAGDVFGAWVIENMSETGTIFTRDGKARRIEFELQLARTDDSHAEGSGGVDPWPDD
DYWEWWM
>gi|319761969|ref|YP_004125906.1| phage tail tape measure protein, tp901 family [Alicycliphilus denitrificans BC]
MAVDSMRLRVVLDLAERVVAPLQKINGASREAASALKATRDRLKELNTQQRTLADFGKARAAMSQQKNSL
QVLRQQLDAMRASGTASTKEVQAQEKTIARQTDAYERQRGTVFRLRTQLTAMGVNAAGQAQRRLASDIAT
ANAAMAVQQKRLEELNRLEDMRSKLAKRHSKEMMHLASVGGFGVAAIAAGRKATTPLRAAIGAFMPAESE
ESQLRASMMGADGSVSAEYQRITDLATRLGDKLPGTTADFIQMMTMLRRQGISAQAILGGLGEASAYLGV
QLKMPVTAAAEFGAKMQDATQTAERDMMGLMDVIQRTYYLGVDSGNMLQGFTKLSPVLGVIGKKGLEGAR
ELAPLLVMMDQTGMAGESAGNAIRKVYQAGLDAKKMAKGNALLASAGISLDFTDGKGEFAGTAHLFAQLD
KLQALTAVQRTGVIKAIFGDDAETLQVLNTMMAKGMAGYDEVVAKMQAQADLRRRVNEQLQTLGAVAEAA
EGSFTNMLKDMGATIAPDLKRVLTALADLANATGAWVREHPELVKWAMRAVGVAALLVTAVGGLALAYAG
VLAPVMLARFALGRLSLAILTTRAAATAAAGGMGLLYRVGFLLGRAWAFAAPVVAGFGQALMVLGRFLLV
TPLGFALTLLATAGYLLYTRWAEVKGGAIALWQDMVALKDRFFTAGADLLNGLVNGITSRAVAVRDAVVG
MADAVGGWFREKLGINSPSRVFMQYGGWIADGAAIGMQGGQGTVRNAALAIATAATAAGPGMAGAGPVRF
DSRPPLSAASLAAAPAPMAAGSTYHITINAAPGMDGQAVARAVAAELDRRERQKSARVRSQLSDID
>gi|319761970|ref|YP_004125907.1| hypothetical protein Alide_1258 [Alicycliphilus denitrificans BC]
MLSVILTAIAVALIGWAALWCLTALLMPVYLWVLYTDSRDRPQREANLREAQKVIAEFEAEQQAHASASR
PLRGI
>gi|319761971|ref|YP_004125908.1| p2 gpe family protein [Alicycliphilus denitrificans BC]
MADLALVFHWRPGDMEDMSVAELMQWRERARERYEKQD
>gi|319761972|ref|YP_004125909.1| tail e family protein [Alicycliphilus denitrificans BC]
MTEKTQPSTPAGQTDAAATAVQNADMREVILDVPLQRPGGELRKVLIRKPNAGALRGLSLIELLNMNTTA
LQTIIPRITEPMIHKPEVNQIDPADLVAIGTEVAGFLVPKAQREAFPSE
>gi|319761973|ref|YP_004125910.1| phage major tail tube protein [Alicycliphilus denitrificans BC]
MGLPRSLKHFATFVDGVNYIGEMPEVGLPKLTRKMEDYRSGGMNAPVKLDFGMEGMEAELTAAGYMKDLF
ESWGTLRHDGVLLRFAGSLQGDDSESWDALEVVMRGRFSEIDFGKAKAGDKTEIKFKGAISYYKLSINGQ
VLVEIDAVNFIEVVNGIDRLAQVRAALGI
>gi|319761974|ref|YP_004125911.1| tail sheath protein [Alicycliphilus denitrificans BC]
MATIPYHHGIRVHEINEGINALKIISTAVIGMVVTASDADATAFPLNEPVLVTQIDAAIGKAGTEGTLAP
ALTAIRQQCRPVLVIVRVADGEGGTPEEKAADQTAKVIGTTTAGGQYTGLQALLMAQARLRVKPRILGAP
GLATQAVADELASVAAKLRGFAYVAAQGENVSEAIDYKDSFGHRELMLIWPGWKTFDVATATVGDVSAEA
YALGLRAKIDQEQGWHKTLSNVPVSGVMGISRDVYWDLQSPDTDAGLLNAANITTLIQSNGYRFWGSRTC
ATDELFRFESAVRTAQVLADTMAEGHMWAVDKPLHPSLVKDMLEGINAKFRELKTAGYILDGNAWYDEEV
NTTATLKSGKLTLDYDYTPVPPLEDLNFRQRITDRYFADFALRVGTGQ
>gi|319761975|ref|YP_004125912.1| hypothetical protein Alide_1263 [Alicycliphilus denitrificans BC]
MKRWLINLLIAADQLLNALLRGQPDETLSSRAHRMRVKGHRWWGWTAAAIDLFFFFDPHHCERAHLSELR
RMQLPPSLRT
>gi|319761976|ref|YP_004125913.1| hypothetical protein Alide_1264 [Alicycliphilus denitrificans BC]
MQTKLIIMDGAVVGTTTPDDPNGYMLVPAPEGFDGDLSAVVFDAQAGVARLSLAGVQAQRVAAIKQEAAA
LIAATDWRLQRAREREQAGWMHVADVAAVLAEREAIRRSSNAAEAAVLQLTDPAAVQAFTWAPTDVAVLA
PRLLTHEQLIQRFTDAEWQTMTEAARGNAAMDAWMRRFTLASVINLDDPATQAGVQALEIAGILAPGRAA
EILGEHA
>gi|319761977|ref|YP_004125914.1| hypothetical protein Alide_1265 [Alicycliphilus denitrificans BC]
MSEALIAPTYAEAAQMHRHFRLLFGNAAALEYLLASTPAPTGAQLQAWLATAANRGAFEQLASSAAGAAA
LCANGAVMAAVADSDKALQCLLASAPAVQAVMASSTAMAAMAGKTTAMQALVQSTDARRALVASRAALSV
VAEVPEAVSVVAEHAPTMSQVVADLDGVRTLAASASAMAAISASSKAMSIVMGSANARSAMYDSTAAWNA
MVASPQARAAMDAVAVEHSQNSTSHGFPTGVAAGVRAALIAQRGSTNGVTSYAGASADTYAAVGNTWVER
YVRVTGLTHRVGASGVNSIIRYVVMQ
>gi|319761978|ref|YP_004125915.1| hypothetical protein Alide_1266 [Alicycliphilus denitrificans BC]
MPTRFEAYRMRDGVTPLSEDFFNAVFGDIDTRIAELEARRADWQGVVDELTAFGLQRIDTLVGPSMAEVN
AMLAQLRQRRDELEAAIGNVGDLATQTQLGAAIDGEQEARTAAIAAEAAARQAAIVGEQSARAVAIALAT
AKPSAATYTYNGAGRVTGAREELPAGERITTLTYDTAGRVATVAEAQSGRTRTTTYGYDAAGRVAGYEVA
EA
>gi|319761979|ref|YP_004125916.1| hypothetical protein Alide_1267 [Alicycliphilus denitrificans BC]
MEKQVIYRDRQELQAADLNNTQLWGDEARRHIVADAITPERQFVGLAVSGRSATELEVAPGRLYDGSSGK
VYALDAAQVHSVFAMLPLQDRKWLAVSVFGQEEDTDIQPRDFLIDLQTREVEPEAVAMQRRRVATVHIAQ
GLESPTPERPEPPTGYTLIAHVRLSPTGVQEVVLADLRRLPNLQRVDARLRTAEGWILAAEPRIAHIMSD
IAGLASDLATRASLEHVAQLGVDMAKVKERLEIPDDYVFYGADHFLDESESDPAHAGYSADPWEGIRPPI
AAQQTGALSLLNPMDPEARTSAGGLMLPAYEEVTRLRMEARAGELAINQYQYQTFNVEQKTMSRERVRTG
ETLTYCTNAAFWKSGVYDPITGILRRGDETWQVDAQDMARATIDHQFVRVTRVWIDRWEEPYWDIVTTEH
VVQGAVLAQTVLMAQTGWLTSAEFFVTSADPAGGLTVLVTEAALGQPDMEKVLARATLAPGAVTAGWLKV
TLPDPLMVEAGKRYAVVLATGAGHRVGFTEGTEYTQGILMYAQDGAYFTNAAERDLMLRLNFARFISPRA
VVQMQPLQLAGGVQELDMLYDAAVPAGCRLVWEYQTGGLWRPVTPDNPPQFGGAALVPLRAVCIGTQDLM
PAVRPATAQVTVRRRATAFVHVSTERTLAQPSKNIRVRLLLEDFGTDAAHTVGCSLIVAGATVPATTHRD
EIVDGRSLWREFRFDLAATTLAYRIRTEGAGVTGAHPWHVAERYDLAL
>gi|319761980|ref|YP_004125917.1| hypothetical protein Alide_1268 [Alicycliphilus denitrificans BC]
MTERHHLLPPNASALERATSSAIGPWTTGDEAIATLHNPYRIPAALLPHMAIAEDVPVWPAGEAERRAVI
AASPRLHALIGTPRGLRELARLAGARIERLEMPPAKTFLGYWDAASRAQWLAAHPELRLYTQRERAACEG
LMLGHGYTAARGEPPARTSAMARSAVRAEVHHPGGQVQQLTTHGWSDLTRDGTATVDLARRATARGQHLG
LPLAGATGRADAAARYWRVQAVQYREREHLLTLKQVAPSLAPLSPDAEPVAERAQRQHVLCAGLPLAGFT
ARSDSARRMYARIRLHDTAVANRPKHGPSYLGFTRLSSPPFVALAHVRMPERRVPFAMAGTAMRAALSAG
DARERMAPTLDAMDWARAAHDKVLVRTRLHATARASRIYRAGAVLAGQTINRS
>gi|319761981|ref|YP_004125918.1| baseplate j family protein [Alicycliphilus denitrificans BC]
MSLDLKSLPAPAVVETLDYEAILDGLRADLLTRYPTAAEVLDLESEPLLKLMEVAAYRELLIRARINDAA
RAVMLPWAVSADIDSLASRYDVERLPGEDDERLRARVLIGYHALSAAGSTHSWRLRALSQSVDVRQVDVW
ADRPGRVKVCLLARVAVPAATLDDEAQALGRALFGEHPAAQSGSMRWRVASAGDAIVGKVETALLAEDVR
PLTVDVDVTAARVLPVAVSATLVHPPGPDGALLAAQAAARVRRLAAATAFRVDVTRAALIAALMGDGIRD
VHLHAPAADVAAGPGEVPAITAITVTAEARHD
>gi|319761982|ref|YP_004125919.1| gpw/gp25 family protein [Alicycliphilus denitrificans BC]
MNRHTGRALGDLEHLRQSIADILTTPIGSRIMRRDYGSLVPQLIDQPDNEATHIRLYAAIASALMKWEPR
LRLASIRFDRTVDHPGRVEVTLTGTRTDARRAPLTLLIQLAGGAAA
>gi|319761983|ref|YP_004125920.1| phage baseplate assembly protein v [Alicycliphilus denitrificans BC]
METPIAQPESPYEILRRLENIVRVGTIADVRHSAPARCRVRTGNLTTAWVPWLAQRAGGQHGHHWWPPVV
GEQCLLLAPGGDLLNAVALPGLYSNAKPQGSADARVFRMDWNEADSMVHDAEMSELTIDCYGAITLKVQD
SIVQISAKSIRLAAGGGELIVDENGVTAKPDVTAQGISLVKHVHTEVRRGGELSGEPA
>gi|319761984|ref|YP_004125921.1| phage virion morphogenesis protein [Alicycliphilus denitrificans BC]
MRRSESVDDIDSLQTWLAPLLEKLSDKQRMRLAREVARDLRAANTANMRAQRGPDGQAWEPRKQPLRAQR
GQVRKSAQTMFQKLRTAKHLKAGAQGGDAVVQFLGRTERIARVHHLGLRDQVKPGGPQYDYPARPLLGFP
DGFEERLKDRILAHLAGR
>gi|319761985|ref|YP_004125922.1| hypothetical protein Alide_1273 [Alicycliphilus denitrificans BC]
MGLRAALSKYLFTAFFICWELGKRLRGKWRRSRLREWWRAHAPERKRG
>gi|319761986|ref|YP_004125923.1| p2 phage tail completion r family protein [Alicycliphilus denitrificans BC]
MLKPASLRDALTAALPELERDPERLVMVIETGNILNTGTAALSWEYRYTLAITVLDWAGHADAIIAPLLL
WAKHNQPELFDNPERRERALRFKVDFLSTTTVDLRLEIDLSEAVLARPRAGTPGALNLIHKPEPPSPLAI
LQREHWEFFIRDEKVAIWDYEPR
>gi|319761987|ref|YP_004125924.1| hypothetical protein Alide_1275 [Alicycliphilus denitrificans BC]
MILDKLKTYAWQLAALALAVLLLLQTHRLTNAAKAEAKAAIALATHTAEVERELRELTDRYRTLEGNYRN
DLLTIADTYASETRRFLDDADRANAARDSMRRDLAAYIESHRAAALNRAAAGQCTPDTAALDLLADLQRR
ADDRAGELALIADDARTRGAECASRYDSARALIEEARRAQTR
>gi|319761988|ref|YP_004125925.1| hypothetical protein Alide_1276 [Alicycliphilus denitrificans BC]
MNRIMSRKFILAIATVASASWLVYAGHIADGVYSAVVIAAVSGYMAANVAQKATVKETP
>gi|319761989|ref|YP_004125926.1| glycoside hydrolase family 24 [Alicycliphilus denitrificans BC]
MQMKEAAVRVAVAALTLSASGLIGIAVSEGWEPVARPPVPGDVPTGGFGSTRSESGPMKAGERIDPVRGL
ILLQRDAGEAERIVQRCAPVPMHQHEFDAFVSLAYNVGSGKAGVKDGFCELKRGGPSTIVRRLLAGDYAG
ACDAILAWDRFQGKPLRGLTLRRERERTLCLGGVA
>gi|319761990|ref|YP_004125927.1| hypothetical protein Alide_1278 [Alicycliphilus denitrificans BC]
MDKENIIRTAATEAAKAAPPVAVVVDAAANSWTMTHTATALTIAYVLLQSAYLIWRWRTDRLDRIARLAR
ESEGTVCK
>gi|319761991|ref|YP_004125928.1| tail x family protein [Alicycliphilus denitrificans BC]
MQAIARDHETLDELCMRHLGTTRGVVEATLDKNPGLAGKGPRLPIGQVVELVEPAAAPVRPTINLWD
>gi|319761992|ref|YP_004125929.1| head completion protein [Alicycliphilus denitrificans BC]
MSFIATANPPAASTEPAVANDGFFPAIDCEQLRKDIRLDGTVTPARLQLAVMDAMWAVNAELREWRAAHV
QAGRGTLGEVPAESIGGESVKVRQYRQAIYAHVQAQLAEAYRDMDTTPQGAGKEARVLSALEIRTDGFNQ
RLRWAIADLKDTSRVIAELM
>gi|319761993|ref|YP_004125930.1| small terminase subunit [Alicycliphilus denitrificans BC]
MRQTPAQRHRMHRLALQQAELAHAANAHGQTTGTAYELQLAQLHQHRLRLKDLQSVEKKVEAKRVLLPEY
DAYIDGVLQARPGTQDDVLATVLVWHIDAGNYARALQLADYALASGMSPPDRYNRDLPTIVQDEVAEAIL
GGKLQGADAVQVAAQAMALTEHADTPDQAKAKLYKAAGWAVLGKTGGHDVDMKTRTLKACKEALPLLQRA
LQLDSRTGVKKDIERLERRLAKLD
>gi|319761994|ref|YP_004125931.1| phage major capsid protein, p2 family [Alicycliphilus denitrificans BC]
MKNATRLLFNQYLSDQAALNGVPSVAQKFAVAPTIQQKLESRIQESSAFLQSINIVPVDEMQGEKLGLGA
SGPIASRTNTNQKDRSTKDVSSLEGQGYKCEKTDYDTHIGYNKLDMWAKFPDFQLRLARAIQRQCALDRI
MIGFNGTSVAVESDLNNNPLLQDVNKGWLQYLRDNAAARVMDEGATQGKVVVGAAGDYKTLDGLVYDASQ
SLLDAWHANAGDLVAIVGRDLMHDKLFPLVNEKQAPTETLAADIVRSQMRLGTLQAITVPFMKPNAVLIT
SLDNLSIYYQAGARRRTVMDNPKRDRIETYESSNDAFVVEDLGKACLVENIEMA
>gi|319761995|ref|YP_004125932.1| capsid scaffolding [Alicycliphilus denitrificans BC]
MPSKFFRVATEGATTDGREIQRSWIEQMAKNFNREKYGARVWLEHYRGVLPESSFAALGDVIAVQARQVE
DGKLALFAQIEALPALVAMNKAKQKIYTSIEVDPNFAKTGEAYLTGLAVTDSPASLGTEVLKFAAGNPDA
NPFKGKKHSEGALFTAAVETDLGLEGDAEGLAGQLLAKFSTMLESLGAIVTAKPTQAQADTFATKTMEVL
GAADAAIKHQAKELAAAQEAHAKMAGEFSTLQTEFKTLTEKLSKQDGSTTHRPEATGTEGTLKADC
>gi|319761996|ref|YP_004125933.1| hypothetical protein Alide_1284 [Alicycliphilus denitrificans BC]
MTAKAAKKPAACAKPKRAVSAVRNTGSAAQKAITKPARSLALDALPAGETRPVDGGAGVRREARALFWMG
WKLSHIAEHLNIPRGTLHGWHKAEKWADTPAVQRVECSLESRLVTLIAKDVKTGGDYKEIDLLGRQLERL
ARIGKYERTGREADLNPAIEARNAGPKKRRAKNFLSDEQIEQLKSAFLDSLFKYQLGWWQSSQQRTRAIL
KSRQIGATWYFAREALIDALETGRNQIFLSASKAQAHLFKQYIVAFVHEVTGVELKGDPIVLANGATLYF
LGSNARTAQGYHGNFYFDEFFWTQDFELLNKVASGMAMHKKWRKTYFSTPSSIQHAAYAFWSGLRLKRKS
KIEVDISHDRLSGGFTGEDRVWRNIVTILDALAGGCDLFDLDELRLEYSDAEFANLLMCGFVDDSFSVFP
LSMLQACMVDSWELWADFKPFSQRPFGWMPVWVGYDPSHTGDSAGLVVLAPPAKPGGQLRVLHTQQFKGM
DFEAQAKAIKEITQRYNVAAMTLDTTGIGQGVFQLVQKFYPAARGINYSVETKTMLVLKAQQVINAGRLE
FDAGNKELASSFMAIKRELTASGRSVTYAAGRSEETGHSDLAWACMNAISNEPLEVGTGLATVQGQSFLE
ISE
>gi|319761997|ref|YP_004125934.1| phage portal protein, pbsx family [Alicycliphilus denitrificans BC]
MTKRTRRTSAQARHHAAQATAPAPSAAPTVSTDTAQNVQSFTFDLGEPEPVIGGRSALLEYAECLQSGDW
YEPPVSLAALARLLRVGAHHESALRFKINVLASTFMPSHWLSAATFRALALDFMVLGNGYLERRRNVLGN
LLELRHALGKYVRRGVEPGRYFFVTDMQSPHEFPRHDVFHLREQDIHQEVYGLPPYLGALQSALLNESAT
LFRRRYYNNGSHAGFILYVTDAAQSQGDIDKMREQLTKTKGMGNFRNLFYYSPGGKKEGIQLIPISEVAA
KDDFLNIKNASRDDVLAVHRVPPQLMGMLPNNVGGFGDVEKAAKVFARNEIAPLQSTMAHAINTWAGVPA
CAFKPYVLEDAPA
>gi|319761998|ref|YP_004125935.1| guanosine monophosphate reductase [Alicycliphilus denitrificans BC]
MEIFDYDNILLLPRKCRVQSRSECDAGVELGGRRFRLPVVPANMKTVVDEKICAWLATSGYFYVMHRFDL
DNLQFVREMRAQGCFASISLGIKQADYDTVDRLKAEGLTPEYITIDIAHGHSDSVRDMIAYLKQHLPQSF
VIAGNVATPEAVIDLENWGADATKVGVGPGKVCITKLKTGFGTGGWQLSALKWCARVATKPIIADGGIRS
HGDIAKSVRFGATMVMIGSLFAGHEESPGKTVEVDGELYKEYYGSASDFNKGEYKHVEGKRILEPIKGRL
ADTLVEMEQDIQSSISYAGGRKLMDIRKVNYVILGGDNAGEHLLM
>gi|319761999|ref|YP_004125936.1| uvrd/rep helicase [Alicycliphilus denitrificans BC]
MHSPESFPPAPAALLQGLNPEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAWLLSTGHATPGGILAVTF
TNKAAKEMLTRLSAMLPINVRGMWIGTFHGLCNRMLRAHHKLAGLPQSFQILDTQDQLSAVKRLCKQFNV
DEERFPPKQLAYFIAGCKEEGLRPRDVEAHDSDTRKKVELYQLYEEQCQREGVVDFGELMLRSFELLRDN
DPVRVHYQRRFRHILVDEFQDTNRLQYAWLKQLAGDVVDGRLVTQGSVIAVGDDDQSIYAFRGARVGNMQ
DFVREFDVRHQIKLEQNYRSYSNILDSANALIAHNSRRLGKNLRTTQGPGEPVRVYEAPTDLAEAQWIVD
EIRQLVREGPMPRSEIAVLYRSNAQSRVIESALFNASVPYRVYGGLRFFERAEIKHALAYLRLLENPHDD
TSFMRVVNFPPRGIGARTLEQLQDAARGSGCSLHDAVSSVPGKAGVNLGAFVAMVDVMREQTQGRNLRAI
IGQVLESSGLLEHYRNEKEGADRLENLDELISAAESFVTQEGFGRDAVALPLDETGAALTQSPASQGLDP
NRPLLQQPLVDTDTGETLSPLAAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDCVFIGGMEEGLF
PHENAMSDQGGLEEERRLMYVAITRARKRLYLSHAQTRLLHGQTRYNVRSRFFDELPEEALKWLTPRQQG
FGSYAPDSRAASAYGAGARAGFGFNAAAFASPPVPPRKEEPAHGLRVGLAVFHTKFGEGKVLAIEGQGDD
ARAQVHFPRHGTKWLALSVAKLTVVE
>gi|319762000|ref|YP_004125937.1| hypothetical protein Alide_1288 [Alicycliphilus denitrificans BC]
MPHTPTPSRRKTLQMLAGLPLLPLGAGASATGLLAACGGGSDSTAAFKSASFTGMAAPTLANPAAMATTT
VGSALKATFDDGSTQSFALAYHPFFITGDMVSNGKGGKLLAGGYYDIRNQPIIDATVAGGERQFFSDAPD
GSSLLTVPNAKVDGVKGKPVFAVVQFEYTTWAQDGKTDMYGKLPSPIAVLTLDQDQATGKLSLVKYHNVD
TSKVYGLWITCGASLSPWGTHLSSEEYEPDAFTIGSNAMFKAYSQNLYGDAARANPYHYGHMPEVTVNPD
GSASIKKHFCMGRISHELVQVMPDQRTALMGDDATNSAYFVFVADREKDLSSGTLYAARVGAGFSIDPAS
GSAAPLTWIRLGSATSAEIEQLANTLKPADIMSVQAKDPGDASYTRIVANGKAEWIKINPGMDKAAAFLE
THRYAAYKGASMGFTKMEGTTVNARDKVAYSALQNCEKSMVAGDAANVPGNGISIPRQLKAGVIMALSLR
GGQKDTDGKAINSEWMPVDTKALLAGEDIAADALGNTANPDRIANPDNLKFSEKLRTLFIGEDSSQHVNN
FLWAYNVDTRQLSRIMSIPAGGESTGLHAVDEINGWTYIMSNFQHAGDWGGIHGVVKDQLDPLIRANYRG
KAGAAVGYLTGTPSQPRLG
>gi|319762001|ref|YP_004125938.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MAGEPLMGEKRWSGHALWRHIGSRGLGHLWRALCVALCAWCIAPLAQAAACEGGQHVRLTRPVEFSAEDL
AYFRAMAPLRVLSADAPPMSRYDEQRRTYTGISVDVWCFIAERLGLRYELIPGRDQTVAQKILQVQEGAA
DVFIPLSLQSERAQRGLFTLPYYESYYAVIARKGWRLPIRDIVDLAQYRVGVVRGVALEPTLKEIVPPHQ
LFSFDETSSAGLFLALRDGSIDVAVFNKSIFAEKRYLHEYFDLEDVLTLYGNPRAYRFYFSPTPQHERVV
AAFDRYLAAMDVTESIAVHEEGERQFIERYVAQRGQRIFLQVASVSAVVLALVLYLSLRRYRRLVRLLER
SNSQIRRQQQALQAANQELERQSQTDGLTGLANRREFDHALRREQARQQRTGAPLSLLMVDVDHFKCVND
HYGHAMGDDYLRAIARVLKAAVGRPTDLVARYGGEEFVCLLPDTAAEDALKVAERIRQGVAELGLPNALA
AIPRLTLSIGIATASGTSAALQQLLAQADTQLYAAKHAGRDRIHAVVL
>gi|319762002|ref|YP_004125939.1| hypothetical protein Alide_1290 [Alicycliphilus denitrificans BC]
MKLHIVPARTGLEWVRQGITVFWRQPMALAALFFMTMAAMSLATMLPLVGPAVALSLLPSATLAMMVAAA
EASQGRTPTPALLLVAFRTGRQRLQAMMTLGAFYALGFLAVMALSALIDGGQFARVYLGGEPLTREVAEA
GDFQAAMWLSLLLYVPLSLLFWHAPGLVHWHNVAPVKALFFSIVACWRNFGAFTVYGLSWMGVFLGAGLA
MSLLVTLLAVVGMGAGMASSIMVATAMMLAAMFLTSVVFTFRDSFEPPQQAGPESSDEPPLTS
>gi|319762003|ref|YP_004125940.1| homoserine kinase [Alicycliphilus denitrificans BC]
MAVFTEVSSKEASDLLRRLQLGELLALRGIEGGIENTNYFVTSEQGEYVLTLFERLTFEQLPFYLHLMKH
LAHAGIPVPDPQADMHGEILHTVAGKPAALATKLRGKSQLAPQAAHCAAVGTLLARMHLAARDYERQQPN
LRGLPWWNETVPVVLPHVGPGQAALLQSELAYQNHVAAGSGYAALPRGPIHADLFRDNVMFEGTELTGCF
DFYFAGVDTWLFDLAVCLNDWCIDLPTGRHDGERTAAMLAAYQAVRPLTAAERELLPAMLRAGALRFWIS
RLWDFHLPRQASMLKPHDPAHFERVLRERVRHPVHP
>gi|319762004|ref|YP_004125941.1| hypothetical protein Alide_1292 [Alicycliphilus denitrificans BC]
MRAVHCLLLLAIASAPALAQNSGQNQAHPNTGERGQLLEKEQKADGRLEQRVQRIVVEDAGSRIDELRVG
GQTQSITVQPKTGTPMPSYEVQSNDGARARPGNFNESDTVTAPRVWNLRKF
>gi|319762005|ref|YP_004125942.1| hypothetical protein Alide_1293 [Alicycliphilus denitrificans BC]
MKHILALLACAASMPALADAEPRNNMPPLLQKSVKGGGITAARFDAGVLRAQLNKPEVTELMYGTFIFHN
ICAQQWYEPAQFAAVGLTRVELFNAEGTQGFAFDARGDTCAEMGRLGKNFRSFIAQYTVACTAGSCPPQR
>gi|319762006|ref|YP_004125943.1| DNA polymerase i [Alicycliphilus denitrificans BC]
MSDIKTLVLVDGSSYLYRAFHAMPDLRAVPGDPTSAATGAIRGMINMLQALKKEVHADYAACVFDASGPT
FRDAIYPDYKANRAPMPEDLRAQIEPIHEVVRLLGWPVLAIKGVEADDVIGTLARAAAGQGMRVVISSGD
KDLSQLVDEHVTIIDTMNGKRRDVAGVMAEFGVPPALMVDFQALVGDAVDNVPGVPKVGPKTAAKWLAEY
GSLDALVAHAGAIKGVAGENLRGALDWLPTARELVTIKTDCDLSGHVAGLPAMDAIAFGAEQTGNLADFY
QKYGFKSLARALKPEAAPAGASGDLFDAPDASTVATRAQHRDVAYDIILTWAQLDDWLARVRAAPLAAID
TETTSLDELRAEIVGISFSVEPGAAAYIPLAHDGPDTPAQLPLAEVLARLKPWLEDPKHPKLGQHVKYDR
HVFANHGIEVRGYVHDTMLQSYVLEVHKPHGLASLAERHTGRTGISYEDLCGKGAKQIPFSQVPVDKAAA
YSCEDSDQTLDVHRVLWPQLEADEKLRGIYALEIACSETLFRIERNGVLIDADRLAAQSHALGQRILQLE
QEAYDIAGQPFNLGSPKQLGEIFFDKLGMPVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLSKLK
GTYTDKLAQLADPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPPGRVIASCDYS
QIELRIMAHISGDEALLRAFHEGLDVHRATAAEVFGVALGQVTSEQRRYAKVINFGLIYGMSSYGLAKNL
GIDNTAAKNYIDRYFQRYPGVWQYMQDTKAQAKARGYVETVFGRRLYLPEINSPNGPRRSAAERAAINAP
MQGTAADLIKKAMVQVQDALDAAKPEVLMIMQVHDELVFELPEGDVDWLRAEVPRIMAGVAELKVPLLAE
VGVGPDWDKAH
>gi|319762007|ref|YP_004125944.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MNIAPRQLRMFLALAESLNFSKTAEQLFMTQPSLSKAIRDLEEALGLPLFERTTRSVQLTASGSRLAAIA
RAVVGEYDAGLQRMLSSAEREARHIGIASLPSLAHVILPQVCAALERRYHLPQITVHDCSNDACIQRLLN
YQADFALASVAPSHPDLKYEEVLRDRFVLLSCGPWRQRLKPTMHLDDLVDLPLISMTDASTAMRYISAAY
LQRGVEFRPKMQFDQVGTIAGFVKKGLGIAVLPYLGMMPMLSLRGLRLSEIADGPVRSVGIVTRRVGAPT
SVALAATEEVKATTQGLMNKHPGWILPPS
>gi|319762008|ref|YP_004125945.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MTDEEADVLDLTGKVALVMGCGAVADGWGNGRATAVLLARQGARVFGTDLALPHAQETARLVRSEGGTCE
VMACDATRSDQVADAVAQCVERFGRIDILVNNVGVSQPGGPVDMDEDVWDAQIQVNLKSAYLSCKHVIAH
MRSQGGGAIVNVASVAGLRYIGKPQVAYAAAKAGLLHFTHTTAVIHAAEGIRLNCVVPGLMHTPLIEGLA
AKYAKGDTQGFIDHRNNQVPMKRMGTGWDTAHAVLFLVADESRYVTGTEIVVDGGLIAATR
>gi|319762009|ref|YP_004125946.1| hypothetical protein Alide_1297 [Alicycliphilus denitrificans BC]
MIHRRIWLACAGAALACSVLPSAWAQGYPSQSIRLIVPFAPGGAVDQTARIIGNRLGEALGQPIVIDNKP
GASGSVGAGELHRARPDGYTLMLALDSQAVNHHIVKNLPFDTFKSFDYLSLLVTTPQILVTRNDVPAKNF
GELVAYLQAHPKSSYGSAGTASAGHVNSAQLSLAKGLKTEHVPYKGAAPLLTDLLGGHIDYAFAGLSVML
PHIKSGKIRAIAVSSPRRSAQLPDVPAVNEFIPGFEFPTWIGLVAPPGMPADVRGKIIKAVHDVMHDPQV
ARRFGDSAFDIVNGSPEDFAARVRKDSDVMADLVARKIVTAD
>gi|319762010|ref|YP_004125947.1| carboxymuconolactone decarboxylase [Alicycliphilus denitrificans BC]
MARIPYADCTSAAVRPLADRIVAERGSILHLYQMLLHSAPVAEGWLNYLTAIRQKSSLPGDVRELVIMRV
ALLNHAPYEADQHAPIALREGVSQDKLDALKEWQGCPLFDARERAVLAYTDAMTRQVQVSDEVFASVAAH
FEPPRLVELTATVAAYNMVSRFLEALQIHSHDAR
>gi|319762011|ref|YP_004125948.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MRLDLRALRSFVTVASAGSISSAAHSLHIAQPALSVQIKQLEEQLGAALFDRHPRGVVLTAVGERLLGHA
VEILRRVDVAYDDVRQAVDQPSGRVAIALPQSVAKFVTVPLVQAVVRQWPQIHLQMVEMSSGYIPQQLLH
GLVDIGMTFGTEDDARMRFMHVLQEELAFVTTAQQLARHRGGPDDDATHMTLHDAARFPMVLPTTTQSLR
RVLDAYMAKAGVAPRIVVEVNTIHEILALVAAGIGSTILSFAAVHDMLAARQLLALPVGRPAMSRSIYAC
RSATLPMSIAATKVHEQLLATIVSLSSSQRWPRSTVIAALSQGDGRVAPSG
>gi|319762012|ref|YP_004125949.1| secreted protein [Alicycliphilus denitrificans BC]
MHQLTRRAWVAAVLAATLPLQAAAQSGTGKTATLVVPFAAGGPSDFIARLLARPLGREMGAQVIIDNRPG
ASGNIGAKQVMASKPDGLTLVHTTIAMQAVNPLMYPDQDFNPSRDLVPVGITGALPNVLVVHPSSGIKTI
AELVAKGRQKNVQLNFATFGPGSSPHFYGMLFEKTTQVAAEPIAYKGSGDAAKDMLAGRIDFMFDSMTTA
IANVKAGKLVALAITSPQRSALLPDVPTLKELGHGGVDVNFWLALQVPARTPPEIVSALRQAISRAVQDP
EYKQGVAARGVENLHVAPEQLDAFFASETKRWRDAALSIGIKAE
>gi|319762013|ref|YP_004125950.1| formyl-CoA transferase [Alicycliphilus denitrificans BC]
MQPLQGMKVVDLTKVLAGPLCGQYLGEYGADVVKVETVGGDDTRRWLPQAQGQSAVFVAVNHNKRSIAVD
LKSQEGREIVHRLVEGADIVLQGFGGGTAKKLGVDHETLSALNDRLIYCEISGYGRNGPLGNAPGYDVML
QAFSGMLSTMGQPGGEYARASFSPVDIGTAMNALSGVLAAVVERGRTGKGVYLEVSLLDTALGFMTYMAQ
SYWQTGANPRPMGTAHPSMVPYQAFDAADGAIMLGAGNDAQWRRFCAVAGLQDWVDHPDFATNALRVANH
GKVVALLEPVMKRRTVAQWLVCLEQASVPCSPIHTLGQALAHPQVQARAIMAETEHPVLGRVRNIGHPAQ
FRHQPRTASRPAPLLGEHTREILRELGYDAQRIARLQQQGAVAAVSH
>gi|319762014|ref|YP_004125951.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MSLFSYEVNDRVAEILFNNPPVNALTQALLGDFLEALERASHDPEVRAVIIGSQVPGRFSAGLDLTAVHT
GAHQKVRALLDLLYVRMTEVQFRMGKPTIAAVGGTARGGGMTIAISCDMVVASSDATFGYPEIDAGVLPS
IHFTHLPRIVGRHRAFELLFTGRAFDAQEAQSLGLVSRLTEPGKALEGARALAQTLCGKSPDVVRFGRNA
FMLANDNGYRQAVAAAADSFCNVALTDAAREGIAAFVEKRKPMW
>gi|319762015|ref|YP_004125952.1| carboxymethylenebutenolidase [Alicycliphilus denitrificans BC]
MLHGDLRQDFDALVPVQGASRRSALQLMLGAGYAAAAAPVMAQQAIATPADGLSAGAVSFTVDGARVHAY
RAAPQGWSGLPVVLVVSEIFGVHAYIADICRRLAHAGYLAIAPELFARQGDPGAYGEVAKLMSEIIAKVP
DAQVIADLDGAVQWAGAHGGDLRKIAITGFCWGGRITWLYAAHGPVKAGVAWYGRLVGQASALTPKQPAD
VAPILKAPVLGLYGEKDGGIPLDTVDKMKVALGAGSPAAKASEFVVYPDAPHAFHADYRPSYRKEAAQDG
WSRMLAWFKRHGVA
>gi|319762016|ref|YP_004125953.1| zinc/iron permease [Alicycliphilus denitrificans BC]
MTLIAIILATLAAGIGSVWIAAALLRAGLGGRWRVGPQHLLSLAAGALLATAFMHLLPEAFEGPADAHDL
FTVLLLGLVFFFLLDKAELWHHGHEHSAAERHIHGPAHGHAAHDHHHGHHHHGHGGWSLLTGDSVHCFGD
GVLIASAFVADMRLGVVAALSVLAHEVPHHIGDLVVLRNSSRHRSAALLKVSLAGAVTALGGLVGYYLVG
LWEGALPYFLAIASSSFVYVALADLIPQLQKRLSAAQTLAQIAWLAAGIVAVTLVSGLAHTH
>gi|319762017|ref|YP_004125954.1| response regulator receiver [Alicycliphilus denitrificans BC]
MRILIVDDEALARSRLRTLLGDCDARHQVMEAAHAGEALARLGISGGRAVDLVLLDIHMPGQDGLALAHQ
IQGLPHPPAIVFVTAHADHALSAFELDAVDYLTKPVRLQRLQQALAKVQRTLGQGAPAQAVQPAEGEALL
IQERGRTERVPLAEVLYLRAEQKYVTVRTATRSFVVDDALSELEARHAAHFLRVHRSTLVARRAMRALER
HYDADEGEGWAVRLHGLTEPLPVSRRQVAAVREALAG
>gi|319762018|ref|YP_004125955.1| phosphoserine phosphatase serb [Alicycliphilus denitrificans BC]
MTTSLAPGINVQGTLPSTRLADYKLIAFDMDSTLINIECVDEIADFVGCKAEVAAITEAAMQGVITDFKE
SLRRRVALLKGVTMADLERVYSERLRINPGAAELVRSCQAAGLKTLLVSGGFTFFAHRVREQLGIDFVRA
NVLEVRSSTNCGELTGRMVDQAWGDICDGLEKRRTMLEVASLLGIEPEQCIAMGDGANDLPMMGAAGLSV
AYHAKPAVRAQAQVAINQGGLDRLLEVLK
>gi|319762019|ref|YP_004125956.1| had-superfamily hydrolase, subfamily ia, variant 3 [Alicycliphilus denitrificans BC]
MLQFQGKTIDTAIFDMDGTMFDTERLRFQTLSQASEELFGKPFTEPVLLGSLGLSATKAEALAKQHYGQD
FPYAAIRRRADELELAHVRTQGVPIKPGLLPVLERLRKSGLKMAVATSSRRAIAEEYLINANIYKYFDLC
VCGDEVVQGKPHPEIFVRAAEALNSQPAQCLMFEDSENGVRSAADAGGVVILVEDIQMPPPAVARRAFGV
YGGLSEFLQDLAACTPKMSMPAVTEPFPQAVNLLKAGIHGFGAMGGGYLAQVFSHWDGYTRPCEIIASTG
NALLREAIDAFGKFSVRYGSLAFDQTIEQLRVIDAADTDAVAGMYRDCEIVALCVPEQAVAAQAGVIAQG
LAERFAAHGRELTVLVVLNKVGGAEFVRAQVEAALLQRVASKVCQRILERTRFSETVVTRIVSKLTEDAL
VRQLRIKSELYKKNVVAVRESSPHVGDWAEALPGDTAEVVAPHVSTLRDAGEPASALAPLHLILFNSETD
MPLYVQQGSDLLEHLRQIDTVADIAVIQLLKNRLWNGTHAIVAWYAALLGYPSIGHAMGDARVQALMDQL
LDAELAPALAAQFPELRTRLAEFIATFRNRCAHAFKDPCERVGRDPLRKLQRGERVLGSLAMAAAQGVAA
PALAFGAALAVHYALHHPPAAEEDECRTIRALYARREALQDVLAWRGEYHGAPFDGLDPVADAALLAAVQ
LPFDGLQAGGLDYCWESAAEAGVG
>gi|319762020|ref|YP_004125957.1| hypothetical protein Alide_1308 [Alicycliphilus denitrificans BC]
MLLEAALALLALAAALAARPWRLLASRKPLAHEAHGAPSALWTPLLATLAILPWAWALPTLHRMPLQLQW
SGACLVLLMLGWPLAVPVLLAVGAIAALVSPGLSWADALGLAVWQGVVPATLALLLGALLRRGAGTHALG
GVRPFVYVLGRAFLGTAACVFVAGSLSQWAGHTLPGVGEQLSLVARWLMAWGDAVVTGMLCAVFVAFKPE
WLATWSDRLYLHDKKP
>gi|319762021|ref|YP_004125958.1| transcription-repair coupling factor [Alicycliphilus denitrificans BC]
MQLPKLSPAKRFTLPRPVGSSDALLLARLGLQQKAEGRTTAIVTADAGDAQRLIDEIAFFAPDLRCALFP
DWETLPYDSFSPHQDLISERLATLWRISQKDRDTGADVVLVPATTALYRLAPPSFLAGYTFHFKTGQRLD
EARLRAQLTLAGYQHVSQVVGHGEYAVRGGLIDLFPMGSPQPYRVDLFDDEIDSIRTFDPDSQRSLYPVP
EVRLLPGREFPMDEAARAKFRQRWRELLEGDPTRSRIYKDMGNGVATAGIEYYLPLFFDETATVFDYLGA
DATVVLHGDLEGAFQRFWQDTRERYRLIQGDPDHPVLPPEALFLSADQFYGQAKPHAQLSLRPGVEDVQD
NAQFQKLPDLSVVRGADDPLARLQAHIHATPQRVLLLAESDGRRESLLDFLRASGLNPPAFDSLAEFQST
PEERVGIATAALATGFAWVEEGLDLVTETELFAAAPTTRRRKKQEQASDVEALIKDLSELKVGDPVVHNQ
HGIGRYRGLVHMDLGSKNPDGTPALQEFLHLEYADKAVLYVPVSQLQLIGRYTGVSADEAPLHKLGSGQW
EKAKRKAAEQVRDAAAELLNIYARRAARQGHAFRYSPQDYEQFVADFGFEETADQKAAIHAVVQDMISPR
PMDRLVCGDVGFGKTEVALRACFVAVTGGKQVAFLAPTTLLAEQHYRTLCDRFAKWPVKVAEVSRFRSGK
EITAAVKGIADGTVDIVVGTHKLLSESTKFKNLGLLIIDEEHRFGVRHKEAMKQLRAEVDVLTLTATPIP
RTMGMALEGLRDLSVIATAPQRRLAIKTFVRSEGTGVIREAVLRELKRGGQCYFLHNEVETIENRRQKLE
EILPEARIAVAHGQMPERELEKVMRDFVAQRYNILLCSTIIETGIDVPSANTILISRADKFGLAQLHQLR
GRVGRSHHQAYAYLMVPDLDGLTKQAQQRLDAIQQMEELGSGFYLAMHDLEIRGAGEVLGENQSGNMLEV
GFQLYNEMLAEAVRCLKAGKEPDLLAPMQAATDINLHAPALLPDDYCGDVHLRLSFYKKLATARTSDQID
TLLEEIVDRFGKLPPQAQTLIDVHRLRVLSAPYGVVKVDAAPGIINITFKPRPPVDPMAIIGLIQKNKHI
KLAGNEKLRIERALPDPAARAQMVRDVLRSLGQPLAETATVPA
>gi|319762022|ref|YP_004125959.1| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase [Alicycliphilus denitrificans BC]
MSDLPPAFNPVRHVPGRFWALVPCAGTGTRAVRAQPGAVAVLPKQYQVVAGHPMVLHTLAAFAGVARLAG
TLVAVAPGDAFFDGHAHPAFFAVPCGGATRADTVLGGIKALQARGASDDDWVLVHDAARCLVTTAQIDAL
IDACQHDSVGGLLAHKLADTLKTATDGPGGVRVASTVDRSDKWLAQTPQMFRIGALRRALEHVGAAATDE
ASAMEAMGLRPRLVPGGAQNFKVTYPDDFALAEAVLAQRMHGATLERFGGARGAAASEPVQTFFSSTTPR
QR
>gi|319762023|ref|YP_004125960.1| 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase [Alicycliphilus denitrificans BC]
MDFRIGEGWDVHALVPGRRLVIGGVDIPHTMGLLGHSDADVLLHAITDALLGAAALGDIGSHFPDTDARF
RGADSVVLLTEAARRVRDKGYAIGNVDSTVVAQAPRLAAHIPAMRERIAGALSLQGGQVNVKAKTAERLG
PVGQGLAIEARAAVLLFKE
>gi|319762024|ref|YP_004125961.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MNATQDMPTDATSPAPLEASASRRPQRSRVGLNLFWRTFFLLALLLVGCILAWVQTLRALEFEPRTLQTA
QQIASMVNLSRAALVHSDAIARVSLLKTMADQEGVRILPREPKDKFELLPPSALGLRLTEELTQRLGPGT
IVASSVNGENGLWVGFTINGDPNWLLMDRSRLSAAGGKTWLIWLTIVGALSLAGAAIIARLINRPLKQLS
DAANRVRDGDFAAGQLDEEAVTSEIREVNIGFNRMAQKLAKLEQDRAVMLAGISHDLRTPLARLRLETEM
SVTDEVAREHMVADIVQLDATIDKFLDYARPDTVALSPVNLHGVVSSCVYAVQDHRELQITMNVPEDLMA
MADEVELARVISNLLENARRYGKNRETGITTVDIAAKAREKWVLIKLRDHGPGAPPEQLANLTKPFFRGD
SARTAAAGAGLGLSIVDKTVQRMGGIFALANSASGGLVAHIQLQRATDLPEGQDPQQRLQRPQVKRHLPP
RSGAPAPQQKQ
>gi|319762025|ref|YP_004125962.1| response regulator receiver [Alicycliphilus denitrificans BC]
MASTTNRTDKVLVVDDDARIRDLLRRYLTQEGFEVMVAEDGKALNRILLRETVDLIVLDLMMPGEDGLSI
CRRLRAASDRTPIIMLTAKGEDVDRIVGLEVGADDYLGKPFNPRELLARIHAVLRRRPPQEAPGAPSGDN
EVVTFGPFTFDLGTRALQKNGEELPLTTGEFAMLKALVRHPRQPLSREKLALLARGREFEPFDRSLDVQI
SRLRKLVEVDAAAPRYIQTVWGVGYVFVPDGTN
>gi|319762026|ref|YP_004125963.1| hypothetical protein Alide_1314 [Alicycliphilus denitrificans BC]
MKEDMKNAFKVIASSALLVGATAVFAQNGPVAALQNVLQLSASGTVEVQQDLLVLTLAATKEAPEAAIVQ
AQLQQVLDAALAEARRAAQPQQMDVRTGAFGMYPRHGKDGKIAGWQGRAELVLQGRDFARITGTAGRIQG
MTISQIAFDLSREARAKVEGEAQAKAIEAFKARAAELARGFGFAGYTLREVAVHSNEMAPGPRPRIMAME
AKAASLAADAPVPVEAGKAQVAVTISGSVQLR
>gi|319762027|ref|YP_004125964.1| 3-hydroxybutyrate dehydrogenase [Alicycliphilus denitrificans BC]
MLNGKTALVTGSTSGIGLGIAKALARQGANIVLNGFGDVDGPRAEVLAAGQAAGARVAYHGADMSRPADI
EDMLKYAATQFGRVDILVNNAGIQHVASVQDFPPERWDAIIAINLTSAFHTTRLALPGMLANDWGRIINV
ASVHGLVASAQKSAYVAAKHGIVGLTKVTALENATTGVTCNAICPGWVLTPLVQKQVDAKAAALGISNDE
AKKVLLGEKEPSMQFTTPEELGELAVFFCSPAANNVRGVAWNMDGGWAAQ
>gi|319762028|ref|YP_004125965.1| alpha/beta hydrolase fold protein [Alicycliphilus denitrificans BC]
MAYWEWNDTGDPRHPHVIVCAHGLSRQGRDFDTLARRLCRHARVVCPDVAGRGRSDWLTDPMDYQLPVYV
ADMLALLAQLHQQAPIATLDWVGTSMGGLLGMGICGVPDLPLPAPVRRLVLNDVGPCLEWQALQRIGQYL
GQPAHFDSLQQAADALWVVSSTFGPHTPQEWLELSRAMVRPAPQGGFVLHYDPAIAVAFRALTPEAASAG
EQQMWQLYDRIAAQVLLLRGTQSDLLSPQTAQQMTARGPRARLVEFAGVGHAPTLLHDDQVDVVARFLLD
GQGEPAA
>gi|319762029|ref|YP_004125966.1| rela/spot family protein [Alicycliphilus denitrificans BC]
MKSSFIGQTLPMAQAGAAAARPDGVPQLIAATSQADTEHADALVRARAFAEPLLIGETLETGENTLAHAD
AVAAILKNLGGSETMQAAAYLVYTCEHLNKPEEVIGKAFGSNFAALAVETTKLMRVQLQAREAQVAGLQV
DDAATQTENVRKMLLAFSRDLRVVMLRLASRLQTLRYYAAAKRPVSPAIAREALQVFAPLANRLGIWQMK
WELEDLAFRFLEPDTYREVARLLDEKRVERELYMEQLRGRLESELRAHSISASVSGRPKHIYSIVKKMRG
KSLDFDQVFDIRALRVIVPSVKDCYAALSWVHSQFTSIEAEFDDYIARPKPNGYQSLHTVVRDEAGRAIE
IQIRTQAMHDHAEHGVAAHWAYKEAGTKGYAGVSASSDYDAKIAVLRQLLAWERDLVGSASRSGLFEDRI
YVLTPDAAVVELPQGATPVDFAYAVHTNVGHRCRGARVDGAMVPLNTPLQNGQTVEISTVKEGRPSRDWL
NPELGYLTSSRAKAKVRAWFNAQATHATVARGRELVEKLLQREGKTAIKHDDLAMQLGFKSADALFEMVG
KDELSLRSIEALLRPPEPVAQEPDLLVRKARTADGAHKGGVLVVGVDSLMTQLAKCCKPAPPDDIRGFVT
RGKGVSVHRSDCRNFHEMAARNAERVIDVQWGRPRRSTAEAAVYPVDVAVEASDRQGLLRDISEVFAREK
TNVIGVQTQSVKGTAWMTFTVEVSDAGRLNKVLGIVAGVQGVRSARRR
>gi|319762030|ref|YP_004125967.1| hypothetical protein Alide_1318 [Alicycliphilus denitrificans BC]
MLEKQNAECVGNYVVTPLIKSTNAGVAASVSIRRGMYDRIFRFAPHFACDAQAVQYALAQGRSMVLQGQL
G
>gi|319762031|ref|YP_004125968.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
MNNRLYVGNLAYSVRDESLVQQFSQFGAVTSAKVMMERDTGRSKGFGFVEMASGAEAQEAINGLHGKSVD
GRALTVNVARPMEARPSFGGGADRGGYRGSRY
>gi|319762032|ref|YP_004125969.1| polyhydroxyalkanoate synthesis repressor phar [Alicycliphilus denitrificans BC]
MPDQNPAPDAKPAQRVIKKYPNRRLYDTSTSTYVTLAEVRQLVMNGETVAVRDAKSGEDLTRSILLQIIL
EEEAGGAPMFSEAALANIIRFYGHAMQGFMGAYLEKNVQMFTEIQAKLAEQSQGLTPEMWSQFMNLQSPM
MKGLMGNYVEQSQNMFQQMQEQMQKQTEQMLGAFGLKKR
>gi|319762033|ref|YP_004125970.1| miab-like tRNA modifying enzyme ylig [Alicycliphilus denitrificans BC]
MSEALSPTKTPKIGFVSLGCPKNLTDSELILTQLSAEGYETSKTFQGADLVIVNTCGFIDDAVRESLDTI
GEALADNGKVIVTGCLGARADDGGGNLVKGVHPNVLAVTGPHAAQEVMEHVHQHLPKPHDPFLDLVPGTF
GEAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDVLNEARALFEGGVKELLVVSQDTSAY
GVDVKYRTGFWDGKPVRTRLLELVQTLGAIARPYGAWVRLHYVYPYPSVDDIIPLMQEGLVLPYLDVPFQ
HSHPDVLKRMKRPASGEKNLERIQRWREMCPELVVRSTFIAGFPGETEEEFEHLLQFLREAQIDRAGCFA
YSNVRGAAANDLPGMLPMELREERRARFMAVAEEVSTARLQRRVGQTLQVLVDKAVGLGKKGGVGRSWAD
APEIDGLVHLLPPEKISKTYKVGDFVKVRIVGTQGHDLVGVPV
>gi|319762034|ref|YP_004125971.1| peptidylprolyl isomerase [Alicycliphilus denitrificans BC]
MAFITTASGLQYEDTVVGTGAQVARGQSVRVHYTGWLYQDGQQGAKFDSSRDRNDPFEFPLGAGMVIKGW
DEGVQGMQIGGQRTLIIPAELGYGARGAGGVIPPNATLKFDVELLAVRG
>gi|319762035|ref|YP_004125972.1| transcriptional regulator [Alicycliphilus denitrificans BC]
MSSKENAAVFQLFEKLECRYALRVLWALRDGHPQTFRLLQDSVGGITPNTLNTRIKELREAGFLDHGSDG
YVVTPVGQDLLKRVSDVQAFANRWAAARVKK
>gi|319762036|ref|YP_004125973.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MRLPDLQSLKLFVAVCEHRSIARAAEREAIVGSAVSKRLAQLEDTVGTPLLVRRRHGVAPTPAGETLLEH
AREMLASVGRIERDMAAFGAGIRGHVRMLVTASVMAESLADDVAAFLQDPAHRDIQVSMEERVSPEVVRG
VREGSASLGICWDAADLSGLHTRSYRHDHLAIVAHPAHPVARAASVRFADVLEHQFVSMPALSAVQQLLV
RAAAVEGKTLEHRVQVSNFDAALRVVRANLAISVIPQEVAQPFAASTGVRVIPLADDWARRRFAICHRGE
AGLSPAARLLVQHLAGRARQHARMEPATF
>gi|319762037|ref|YP_004125974.1| pyruvate carboxyltransferase [Alicycliphilus denitrificans BC]
MPPNPDTPRATVREVGLRDGLQSIATIVSTARKIEWLDAAHAAGLREVEVGSFVPVRLLPQLADTAEVLA
HALTLPGLMPSVLVPNLKGAERAIACGAPWMIVPLSASHAHSLANLRKTPDEVVADVARMRAARDAAGSR
TRIEGGVGTAFGCTIQGEVPEAEVLRLLQALLDAGADRVSLADTVGYADPAGVQRLFEKARALVGEHLAG
AHFHDTRGLGLANCYAAWQTGVRRFDACLAGIGGCPHAPGASGNVTTEDLAFMLERMGAATGLNVPALLA
LRRRVEGWLAGETLHGTLWRAGLPRLAAA
>gi|319762038|ref|YP_004125975.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MNTSSLPLAGIRVVEFTHMVMGPTCGMVLADLGAEVIKVEPVEGDRTRHLLGAGAGFFPMFNRNKKSIAI
DLRSPQGLEVAIRLASSADVVAQNFKPGVMAKYGLDYAALSRLNQRLVYVNHTGFLHGPYEHRTALDEVV
QMMGGLAYMTGRPGDPLRAGTSVNDIMGGMFGAIGAMAALMQRAQTGRGQEVDSALFENNVFLVGQHMMQ
YAVTGEPAAPMPERISSWAVYDVFSVKDGGQIFLAAVSDAQWQTFCDAMGYADLKADPRYATNNDRVRAR
PTLLPMLRERLAAHTADALAAVFERHGLPFAPIRRPEELFDDPHLNATGGLADVTLPDGERAGATARTTL
LPLRLDGQRMGVRMDPPRLGQHTPELLAGLGYTAEQVEALRGAAAVA
>gi|319762039|ref|YP_004125976.1| hypothetical protein Alide_1327 [Alicycliphilus denitrificans BC]
MHTFHSIARHGALVSRRSALAWGVAALGAPALALAQGEGRPLRMILPVSAGSGADGAMRAISNSLAKALG
QPVVIENLPGAGGITGTAQIVRAPRDGSVIGVVSNNHVVNPAVYRNIPFDSLADITPITVVGTTPFVLVA
HPSVPARTVQELVAYAKAHPGVLNYGSSGNGTILHLGAAMFVDQAGLDIRHIPYRGMGPLMNDILGGQVQ
LGVVAVAPAAGHIKSGALRALGVTSAARVASLPQVPTIAEQGLPGYELDGWIAAIGPAGLPRAEVYRIYQ
GFQRALQMPEARDALVAQGYVIRLPPPEEAAAFFRSETARMAQAVKSANVKMD
>gi|319762040|ref|YP_004125977.1| 2-dehydropantoate 2-reductase [Alicycliphilus denitrificans BC]
MHPTTEPHTPPHPGRLRFAVMGAGAVGCYFGALLARAGHAVTLIGRPAHVQAIQARGLRLQTAAQDEHVA
MGASTDAGAVAGADVVLLCVKSTDTEAAARQIQPHLAPGALVLTLQNGVDNDERVRAVLGPAQPVAAAVV
YVATAMAGPGHVRHFGRGELVLAPSLIAERLVRELGAAGIPAQVSDNVRGALWSKLVINCAYNALSAIVQ
RPYGWLARQDGATEVIADLVAECLAVAQADGVRIAGDIHAAVRGIVQSMPGQRSSTAQDLARGRPTEIEH
LNGYVVQRGKALGVATPVNHALLVLVRMAEAARTEV
>gi|319762041|ref|YP_004125978.1| methyladenine glycosylase [Alicycliphilus denitrificans BC]
MTLEYRWLYDTVRKRFESDEAMEAFLPTALTPQELKQKGDDRYLSAMSQRVFQAGMQHSMVDAKWPEFEK
AFSGFAPGQMALLGPQQIEDHMKNDRIIRDRTKLQTIPKNARFILDIRQERGCGFGEFIAGWPGADTVGL
WRLLAQRGARLGGRSAAGFLRLAGKDTFLLTSDVVARLMAAGIIDHAPTSQRDMQIVQDAFNRLQQDSGR
LLCQLSAMLSLSINPGF
>gi|319762042|ref|YP_004125979.1| hypothetical protein Alide_1330 [Alicycliphilus denitrificans BC]
MPKFITIGYGDQEGYDLTPEPLRNAAHANSRMAGP
>gi|319762043|ref|YP_004125980.1| RNA polymerase sigma factor rpod [Alicycliphilus denitrificans BC]
MPVQKSAKSPKPASGTAAKAASKAATPVKTAAKAPAKAATAKAADAALQAATKVKTVPTPKTTAELTKAA
DELLKKKPARAPKAAAAQAEASEDAPKKKPGRPAKAAGSATAAAKAPAKRGRKPKAKEEGLEDDADLSDI
EAELEGEPEAPEAEAEAAPAEKAKPLRMKISKAKERALMKEFGLDETVLSEEDMAKRRSQLKKLITLGKT
RGYLTQVEISDHLPDKLVDAETMEVVVAMLGDMGVAVYEQTPDAETLFQNNVAPTATTVEEAEEEAEAAL
STVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLMDMMEAISASPATIAEILNMGEEIREG
KVVISTVVDGFSNPEEADDYVAEEDFDEYDEEDDDDGKGGSKAMTRLLEKLKTEALDRFDELRSLFEKMH
KIYDKEGYGSPAYMKVQHEISAKLMTIRFTAKTIEKLCDMVRAQVDDVRKKERELRRIIVDKCGMPQETF
SKEFPSNLLNLQWVEKQAAAGKPWSAVMQRNIPPIQELQQHLIDLQSRVVVPLAELKAINKRMNQGEANS
RDAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRS
IADQARTIRIPVHMIETINKMNRISRQHLQEFGFEPDASILAAKMEIPEDKIRKIMKIAKEPISMETPIG
DDDDSHLGDFIEDSNNTAPIDAAMQAGLRDVVKDILDGLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDV
TRERIRQIEAKALRKLKHPSRSDKLRSFIDSL
>gi|319762044|ref|YP_004125981.1| DNA primase [Alicycliphilus denitrificans BC]
MSIPQSFIQELLARVDVVDIVGRYVQLKKSGANFMGLCPFHGEKSPSFSVSPSKQFFHCFGCGKNGNAIG
FLMDHAGMGFREAVQDLAQQVGMQVPDDENTSPQDRERAAAQRQKQATLTEVLEKAGESWRRHLRESPRA
IQYFKGRGVSGQVAKRYGLGYAPEGWRNLASVFPEYDSPLLEESGLVIVGEDDGKRYDRFRDRVMFPIRN
VKGECIGYGGRVLGDDKPKYLNSPETPVFHKGRELYGLYEARGAIREMGYVLVAEGYMDVVALAQLGFPN
AVATLGTACTPDHVHKLFRFTDVVVFSFDGDAAGRRAARKALDGALPYASDTRSIKFLFLPPEHDPDSFI
RAHGPEAFARHVGDAMPLSRFLLESAREGCDLGTAEGRAHMLANARPLWSQLPDGALKRQMLAELGELGQ
LPAKDLAELWAQEGPRAAPAAAPEGGDPFADEPPWHPQPPGPWQGEPARRPWRKDAGGRWRREPARPAQP
PLPRRPAASRIDHAARLLLSHMQFLEGLSHEDHAALCAQPEPHGPLFAWLEGQLHEHGPQPWAVLREALR
GHDCEPLAERVMTGSHAQTEGDEAELHAELRGLLDRMLIEEFKRQQQELVPRVTRDPAALAQYQALEQRL
KGLLGISPRPT
>gi|319762045|ref|YP_004125982.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MTSMYDQNLPRNEANHAPLSPLSFIERTAEVYPDRLAIVHGGLRQTWGQTYARCRRLASSLRAAGIGKND
TVAVMLPNTPPMVEAHFGVPMAGAVLNALNTRLDPETIAFMLDHGEARAVIVDPEFAPVMARALALRQSK
APLLLIDVEDAVYGAAAERLGTQTYEEFLAAGDPQFAWELPGDEWDAIALNYTSGTTGNPKGVVYHHRGA
AINAISNVLEWDMPKHSVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRRVEAQAIFDAMRSHGVTHYCGA
PIVHGLLVNAPAAMKEGVPAGVKAMVAGAAPPASMIEGMEKLGFDLTHVYGLTEVYGPATVCARHDAWNA
LDVGERARLNARQGVRYHLQRAAAVLDPETMQPVPRDGETMGEIMFRGNIAMKGYLKNPAATGDAFRGGW
FHSGDLAVQYLDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPDVLAAAVVAKPDPKWGETPCAFVEL
KAGAQATPEDIVAHCKKHLAGFKVPRAMVFGELPKTSTGKIQKFELRRQAGSAAAINV
>gi|319762046|ref|YP_004125983.1| phospholipase d/transphosphatidylase [Alicycliphilus denitrificans BC]
MTRPAALARRLPALLAGLMLAGCSLPPLAGRSTSAALELPAARDTQLGRALGPELAAHPGLSGIHALDHP
HDAFAARVLLARAAERTLDVQYYIWRGDTTGTLLLAELLAAAERGVRVRLLLDDLGTAGLDGPLAAMNGH
PRIEVRLFNPFTWRNPKPLGYLADLRRANRRMHNKSFTVDNQASIVGGRNVGDEYFGATSGVLFADLDVL
AVGPVVQDVSDDFDRYWASASAYPAERILPAVAPQAVAKLAAQARALQESPRARDYARAIAGSPFIRQLL
GHSLPLHWARVQMLSDDPAKGMGQARRADLLLPRLGAVLGAPRRSVDLVSPYFVPTAHGVEAFARLRQAG
VRVRVLTNAFEATDVPAVHAGYAKYRKRLLEQGVALYEMRSLVPEYAADKGRPLLQRLGSSGSSLHAKTF
AVDGERVFVGSLNFDPRSALFNTELGFLIDSPALAQQVALAFDREIPLQSYRVALAEDGTLRWHGGVGNP
APVYGTEPRTTWWSRSLVWLLMRLPIEWFL
>gi|319762047|ref|YP_004125984.1| regulatory protein lysr [Alicycliphilus denitrificans BC]
MHRIQLHYTLDRDAGDALIRNPLLDMLQAVAQQGSISGAARALGLSYRHVWGALKRWEEQLGSELIVWGK
GQSAQLSEFGAKLLWAERQAQARLAPQIEALHADLERAFAVAFDDHAHVLTLYASHDDALSVLRAFAAVP
GHAGQGRALHLDIRFTGSVDAIRALNEGRCTIAGFHTLEQPAMDSLAAQTYRPLLQPGLHKVIGFARRTQ
GLIVARGNPLGLASLADVARTGARFVNRPLGTGTRVLLADLMAQAGLESGDIDGYGRDEPSHAALAQAIA
AGSADVGMGIELAARARGLDFVPLVHERYHLACLKSTLEQPATRALRDLLQTPAWQRRMAAMPGYAPMHC
GEVLAMSRVLPWWRFARRKSAGAHQHASP
>gi|319762048|ref|YP_004125985.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MSAISQSVATALNLVTSADAVLWTIVARSLSVSATACALACGAGVVLGAWLGVARFAGRDGVLTVLNTLL
AVPSVVVGLGVYLLLSRTGPLGGLGWLFSFKAMVLAQALLVLPVVTALTRQVVEDAERVHGEQLRSLGAG
TLLRALLIAWDERYALLTVLIAAFGRAVSEVGAVMIVGGNIDGFTRVMTTAIALETSKGDLPLALGLGLV
LLAVVLLLNVLIAVLRRWRQRVDGAAIGGMAVAA
>gi|319762049|ref|YP_004125986.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MSVVPAPAWRRAAQPQDVQTLEPPLFALRDLGVRYGAVQALAGVNLRVLPGERVALVGANGSGKSTLLRV
LHGLVRPSAGQMRRDGTPRVAMVFQRPFVLRASAVSNVALGLWLRGVRWKQARAQAAAALQRVGLQDVVR
RNARTLSGGQQQRLAFARAWALRPDVLLLDEPTASLDPHAKREVEALMADFAASHGSAGPAQPLTMVFSS
HNLGQVKRLASRVVYLEHGRVLADLPVHDFFNGPLPEAARLFVKGEMT
>gi|319762050|ref|YP_004125987.1| extracellular solute-binding protein family 1 [Alicycliphilus denitrificans BC]
MMRLKRFRPVAITQTAVAAICLIAFGSAAAQVITMASTTSTEQSGLFSHLLPAFKQATGIDVKVVAVGTG
QALDMARRGDADVLFVHDQAAEEKFVADGWGVKRYPVMYNDFILVGGKGDPAGVRGNDIVAALKKIAAAN
AEFISRGDKSGTHAAELRYWKIASPDAKGSGYKECGCGMGPALNIAAASGAYVLSDRGTWLNFKNRDSLA
VLVEGDKRLFNQYGVMVVNPAKHPHVKQAEAQKFVDWVTSPAGQGTIAAYKINGEQLFFPNAGSN
>gi|319762051|ref|YP_004125988.1| hypothetical protein Alide_1339 [Alicycliphilus denitrificans BC]
MNTTTNGAAAEPAAPAEESGEPGRPKPQETTGLDKFQLVLATRPVLRNAALVFCVCLFPVAMALTWFAWF
LWLPKVWDWSFAEFTLRSVPGFFGVFFIAFLPIYALIGAFIATAYVVEVYTDEATKKVRLVLERGSSLQS
NAEDELAKQDQSGLVPLLRYSRVQLESYYAIGLTQTQRSFRYSIIAMWIGFAVILGGIIIRVVDLDRFGL
RPLDTDISTLIIISGAIIEVISALFLWVYRSSVRQLTYFYNRQLYNHSILMSQRIAETMTSADEIKKTII
EKLLDRSWAYEPDTLPSGQSLLSFRSPKG
>gi|319762052|ref|YP_004125989.1| molybdate abc transporter, atpase subunit [Alicycliphilus denitrificans BC]
MSGIHARLLVSRPDFTLDVDLRLPGTGVTALFGPSGCGKTTCLRAVAGLERTEGRVQVNGETWQDSAAGQ
WLPTHRRALGYVFQEASLFPHLDVRRNMEYGLRRQPPARRHVSLEQAVELLGLGALLSRMPHTLSGGERQ
RVAIARALAASPRVLLMDEPLAALDAARKAEVMPYLERLQRGLDIPVLYVSHSPDEVARLASHLVLLENG
RVVEQGTPATLMARLDLPFAHGDAAAALVEARVTAHDARDHLLTAQFGGGLLRLVSTRARAVGERVRLRI
PARDVSIALAQAQGSSILNLLPARITTLADDSPGQVLVRLDAGGTVLLARITRHSCTELALAEGQTVWAQ
VKGVALVD
>gi|319762053|ref|YP_004125990.1| molybdate abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MIPSFLSPEDWAAITLTLELAGTTTVLLLALCTPLAWWLAHTRSRWRGPVGAVVALPLVLPPTVIGFYLL
VTMGPNGPIGHLTESLGLGRLPFTFPGLVIGSIVYSLPFAVQPLQRAFEALGRRPLEVAATLGAGPLDRF
FTVALPLARPGFVTAAILSFAHTVGEFGVVLMLGGNIPGVTRVVSVQIYDHVEAMEYAQAHWLAGGMVAF
SFVVLMLLHWLQPKGAR
>gi|319762054|ref|YP_004125991.1| molybdenum abc transporter, periplasmic molybdate-binding protein [Alicycliphilus denitrificans BC]
MNRPPLLHRTLSALGLAALMLPGAHAGEVSVAVAANFTAPMQKIAAQFEQDTGHKAVLSFGATGKFYAQI
KNGAPFGILLAADDSTPEKIAREGLGEGATRFTYAIGQLVLWSKQPGYVDAEGKVLQKTDWQHIAIANPK
LAPYGLAAMQTLDKLGLTAQVQPRVVTGENIGQTYQFAASGNAQLGFVALSQVTEDGKLREGSAWVVPGN
LHEPIRQDAIVLKPGQGNAAAAALMDYLRGAKARAVIKSYGYSF
>gi|319762055|ref|YP_004125992.1| tobe domain-containing protein [Alicycliphilus denitrificans BC]
MMHLMQSPVSFKDALGHGMADKRIDILRQIGQGGSISQAARAVGVSYKAAWQALDTLTNLAGVALVERVV
GGVGGGGARLTPAGRQLLATADAVQQARSAVLVGLGEGGEGGDADAAVARLSVRTSMRNQWPCTVQAMES
RGQIVRVHLRGAGGAVAGLAVCSRITRESAELLGLRPGLPVQALCKATAVHVLPLAAAGAAQDGNRWPGR
AVRVSRGELGDEVAAQLDAGVQMVGFAAAGSGLRARSRVVLAAEESAIVLAVV
>gi|319762056|ref|YP_004125993.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MSDVILKTSHLTKEFKGFTAVSDVNLSVRRGSIHALIGPNGAGKTTCFNLLTKFLVPTSGTIHFNGHDIT
HEQPAQIARRGVIRSFQISAVFPHLTLMENVRLGLQRKLGTSYHFWRSQSSLNQLNGRALELLAEVGLED
LADEVTVNLPYGRKRALEIATTLAMEPELMLLDEPTQGMGHEDVDRVTQLIKKVSAGRTILMVEHNMKVI
ATIADCITVLQRGAVLAEGPYEEVSKNPQVMEAYMGTTDGQLQGAH
>gi|319762057|ref|YP_004125994.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MATPALEIRNLQAWYGESHVLHGVDMLVQPGEVVTLLGRNGAGRTSTLRAIMGLTGARKGSIRINGQETI
AMPTHRIAHLGVGYCPEERGIFSSLSCEENLLLPPVLKTGTQGMPIDEIYAMFPNLAERKNSQGTRLSGG
EQQMLAVARILRTGAKLLLLDEISEGLAPVIVQALARMIVMLREKGYTVVMVEQNFRFAAPLADRFYVME
HGRIALEFGAAELEARMPVLNQLLGV
>gi|319762058|ref|YP_004125995.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MQKTLKTLVTMLGMAGLGLSAMQAHAQDKVKIGFITDMSSLYADVEGKNGALAIQMAIDDFGGKVLGKPI
ELLSADHQNKADIAASKAREWIDTQGLTMLFGGTNSGTALAMAKIADEKKRVFLVNGAGSSALTNEQCSP
YTVHYAYDTVALAKGTGSAVVKQGGKDWFFLTADYAFGAALEADTAKVVKENGGRVLGSVRHPLNASDFS
SFLLQAQNSKAQILGLANAGGDTINAIKAAKEFGITKTMKMAGLLVFITDIHSLGLKNTEGLLLTTSWDW
NLNDQTRAFGKKFFAKTKRMPTDIHAADYSATMNYLKAVQAAGTTDADKVMAKLKSTPIDDFYAKGVIRP
DGRFVHDMYLMQVKSPAESKEPWDYYKVVAKLPGDQVFTTKAESKCALWK
>gi|319762059|ref|YP_004125996.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MKAKLTTLAAAVLGVAGLMAAPAQAQDKVKIGYISDMSSLYADLEGKYGATAIQMAIDDFGGKVLGMPIE
LMSADHQNKADIAASKAREWIDTQGLTMIFSGTNSGTALALAKVAEEKKRVMINNGAASSALTNEQCTPY
TVHYAYDTVALSKGSAGAMVANGDKSWFFLTADYAFGHAMEADASKVVKDKGGTVVGAVRHPLNASDFSS
FLLQAQNSKAQVLALANAGGDTINTIKAAKEFGIGKTMKVTPLLVFYSDIHSLGLKNTEGMQFVTSWYWD
MDDASRKFADKFMAKTKRRPTEIQAADYSATMNYLKAVQAAGTTDADKVMAAWRGMKMDDFFAKGQIRPD
GRYVHDMYLVQVKAPKESKGTWDYYKIVKKLPGEEVFTTKAESKCALWK
>gi|319762060|ref|YP_004125997.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MEIFGVSMPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGALITWMAMNYFGVNYWV
MLIAAPLLVGVFGVVLERLLLRWIYKLDHLYGLLLTLGLTMVIEGVFRSIYGVSGLGYDTPELLEGATNL
GFMILPNYRAWVVVASIVVCIATWYVIEKTKLGAYLRAGTENPRLVEAFGVNVPVMITLTYAFGAALAAF
AGVLAAPVYQVTPLMGQNLIIVVFAVVVIGGMGSIMGSILTGLGLGVIEGFTKVFYPEASSTVVFVIMAI
VLLIRPAGLFGKEK
>gi|319762061|ref|YP_004125998.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MNVKKFAPVGYGLLLLALIAAPFLGAYPVFVMKLLCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTG
HAVKVWGATPELGLLAGLLSGAALGLVMGWFTIRRQGIYATMITLALAQMLFFAALQLPFTGGEDGLQGV
PRGKLFGVLDLSSDMTMYYVCLVIVVLAFLLIVRTIDSPFGQVLRGIKENEPRATSLGYDTNRFKLLAFV
ISAAIAGLAGALKTLVLGFATLSDVHWSASGHVVLMTLVGGMGTLSGPLVGAAVVVALENKIGELGNLLA
SLTTIDWFNTLGESVTIVTGLIFVVCVLAFRRGIMGEIIAWLERRGAGGGGSH
>gi|319762062|ref|YP_004125999.1| secreted hydrolase-like protein [Alicycliphilus denitrificans BC]
MIARRALLALGAFGALGGRARALPARTLAFPRDHGSHPDLRTEWWYITGQARADGRLWGFQITFFRSRVD
AAQGLRSAFAARQLIFAHAALTDVQGGRQLHDQRIARAGFGIAQALEGDTDIRLRDWSLLRRPAPLPGAS
RYEIRAQADGFALELDCASTQPVLLQGDAGLSRKGPGPEQASYYYSQPQLAVTGAITLGGRRMAVADAGA
HDNRAWMDHEWSEALMAPDAVGWDWIGMNLRDGAALTAFQLRRADGSALWAGGSWRRAGESRAEVFGPQT
VLFTPLRRWRSPGSGALYPVEWRVDTPAGRFGVQALLDAQELDSRGSTGAIYWEGLSLLRDEAGRELGRG
YLEMTGYAQRLRLG
>gi|319762063|ref|YP_004126000.1| pyridoxal-5'-phosphate-dependent protein beta subunit [Alicycliphilus denitrificans BC]
MPTITTPAHDSWLHGAIARIEADYQRSADTHLIPLPLPTFSEAGIDLYLKDESTHPTGSLKHRLARSLFL
YALCNGWVDEGSTIVEASSGSTAVSEAYFARLLGLPFVAVMPRSTSAEKIALIEFYGGRCHFVESAGEVY
EAAHAVAAQTGGHYMDQFTYAERATDWRGNNNIAESMFSQMQRERHPVPRWIVVGAGTGGTSATIGRYVR
YQRHATQVCVADPAGSVFGAYHRTGDALLTAPGSRIEGIGRPRVEPSFIRTLVDRMEEVQDVDSIAAMRA
LSTLLGRRVGPSTGTNFVAMLTLAQQMRARGEQGSILSLLCDAGERYLPTYYDAAWVRRCMGDCAAAEQR
LRALLA
>gi|319762064|ref|YP_004126001.1| hypothetical protein Alide_1352 [Alicycliphilus denitrificans BC]
MWRKPARAAIAPHNRPMLPALVRTFSWHELRRHPWRSAAAVAAVMLGVALGFAVHVINASALEEFSQAVR
AVEGQPDLELRATRGTLPESLYGLVAKAPQVQIASPWLELPVRARSSAARAGVPLRVLGADTLLLPAMAP
ALAPRVSEGGDRLAMLAPATVFLNPAAQQALGLGAIDAHTPPITLQAGLATHSVRVAGTVAAGGPPLVLM
DIGAAQDLFGRAGELTRIDLRLRPGGTRAVLERALAALPGWSAGVQFAAPQDAVQRVDSLSRAYRVNLTV
LALVALFTGAFLVFSVLALSVAQRAPQLALLAVLGATPRERLALVLLESAALGLAGSVAGITLGAALAAL
ALRLLGGDLGGGYFAGVQPTLQWSTAAALVYGLLGVAAALAGGWWPARQAQRLPPAQTLKGLGSQGGRAG
HPWAGIFLIAASALLASVPPIFGIPLAAYVAVGLLLVGGMALLPWLVQALLARLAPLAAGSTLALLALER
ARRMPAGAAVAVGGVVAALSLAVALTVMVTSFRGSVGQWLDSVLPAPLYLRAAGVAGGDEAAVFPPGFTD
VLARLPGVARVQALRSSSVQLQASRPAVALLARPLGGDPARALPLVGPALPVPPGRVGVYVSEAAADLYG
ARPGADWPALSETFRPPVLDGQSPEATFFIAGVWRDYVRQHGAIALDSEDFARLTGDRRASDLALWPTPG
TDADALRAQVLARARLNLGEAAAAALEITSAEAIRARSLAIFDRSFAVTYWLQAVAIAIGLFGVAASFSA
QVLARRKEFGLLVHLGLTRRQILAVVAGEGTAWTAVGALAGLLLGLAVAAVLVHVVNPQSFHWTMDMALP
WPRLAALAGAVVAVGTLTAWLAGRQAAGRDAVMAVKEDW
>gi|319762065|ref|YP_004126002.1| heat shock protein hsp20 [Alicycliphilus denitrificans BC]
MNSLVSRGSLFDDFFKDFAPGFYVRPLHGDGLPAPSQIKIDVKEDDAAYTVQAEVPGVPKEDINVSIDGN
VVSLRAEVRQHDEKKDGEKVLRSERYYGAVARSFQLPVDVDAAQAKARYDNGVLTLTLPKKQGNKTQRLA
IE
>gi|319762066|ref|YP_004126003.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MSPMDELLRVQALAKRYGAATVFENVEFTLRAGEFLAIVGESGVGKSTLLNCLAGLDGWDAGRIVHAGGT
DLAALDDAQRALWRRAHVGFVFQAFHVLPHLDVAQNVGLPLLLLGRPDGARVQQMLAAVGLEGLGGRLPQ
QLSGGQMQRVAIARALVHRPALLLADEPTGNLDPGTAARIMDLLIAQTRGHGAALVLVTHSQAAADRADR
VLRLTAQGIRPAA
>gi|319762067|ref|YP_004126004.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Alicycliphilus denitrificans BC]
MPAERIPAVALAGPTASGKTAAAFAIADALAPQLPVEIVSVDSALVYRGMDIGTAKPTREELAHVPHHLI
DIRDPLQPYSAAEFVQDATRLIAEIRARGALPLLVGGTMLYFKALMDGIDDMPPADAAVRARLEQQAAAI
GWAGMHAELARVDPPTAARLAPGDSQRIQRALEVWHVSGRPLSSFHTTKTGAASAHPISAGAFFSLEPQD
RAWLHERIALRFHAMLAAGFLDEVMRLRARGDLHADLPSMRCVGYRQAWESLDGLHPLASLPERGIAATR
QLAKRQITWLRGMPQRHAIACDAPDATARLLQAVRHRLGA
>gi|319762068|ref|YP_004126005.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MSVPSAAIGTQKAPAVPVSPGLAIVVLALLLSIQPVTTDLYLPALPALTRSLGAPVAVGQLTLSALLLAI
GCSQLAWGPLSDRFGRRPVLLAGLAVYTLASVGAALAPTMALLVAWRTAQGLAMGAAVMCARAIVRDLYT
PLAGARAMSKALTGLGIVACLCAPLGGLLTEWLGWRAALLVLTAYAVAMLALVALRLPETLRQRNPHALR
PGTLARTWALVLRSPTFWAFSLLTTATYGGLFTFLAASSFVYIGVLGTTRTQYGLVLLSTAVAYLLGTLL
CRRLLGTVWPLVQGVALWSVLLAAIAWTLVQRHAEPEPAHAR
>gi|319762069|ref|YP_004126006.1| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MISTVPIPLLVLNGMSQRHLDQIGQRFDVCHAPTPAQRAQAIAGQGARFRAVLTIGSVGLTAQEIGAMPA
LELVCVLGAGYENLALDAARARGIALANGAGTNDDCVADHAFGLLIAIVRGMRALDRQCRAGVWRDAIGL
PPNVSGKRLGIFGLGTIGRKIARRAAGFDMEIGYHNRSPRADVPHRYFGSLHDLAAWCDVLVCATPGGPA
THHRVDAAVLQALGPQGYLVNIARGSVVDTQALAAALRERRIAGAGLDVYESEPAPPQELIHLDNVLLTP
HVAGWSPEAVQASVNRFLANAEGYFAGRGVVSPI
>gi|319762070|ref|YP_004126007.1| histidine triad (hit) protein [Alicycliphilus denitrificans BC]
MPMFVDTSPPGQCIFCRLVAGEIPSAKVYEDALTIAFMDIGQVTPGHVLVATRRHAATLLDATPEEAAAV
MQTAHRVALAVQAAFDPPGLTLLQANGTLGGQTVAHFHMHVVPRHEADGIALTWPRKEPPAAVLAGYAER
LRAAL
>gi|319762071|ref|YP_004126008.1| porin gram-negative type [Alicycliphilus denitrificans BC]
MPKKLIALAAAALCCTGAYAQSSVQVTGLADVYAGSMKMAGDASRKSVVNSGGMTTSWFGFKGTEDLGGG
LKANFQLTSFIQVDNGTQGRFGGDTFFSRDANVSLSGSFGSVLLGRWMAPNFLPSVVGNPMGDSFAFSPL
ILHMDVPLFNASGWKATVPSDTGWSNQIAYSTPDIGGFKANLQYQFGEQAGDNGKKNVGANFFYFGGPLT
LTGFYERAQISNPGQGTYLGTTKKDWMLAAAYDFKVVKPYLSYGQAKADNNPDKAKTLQVGASAPLAGGS
LLASWAKTDLSFSDLDRKTFTLGYDYYLSKRTDVYAMYMNDKITNQSTGNSFGVGIRHRF
>gi|319762072|ref|YP_004126009.1| cyclic nucleotide-binding protein [Alicycliphilus denitrificans BC]
MFPTPSSDQSVQIEVATAGEVLRERHQQPASVLYLDSGRVLLGVREDGVMRHQLGVVEGPFWLDAATALL
DQPCAVDMVADTRVQLRRMPVEEFKRSFDALPQAAQVLVRDMAIGYCQQTELAVSRLAQDAEARCAQWLL
RHAHNSEDGGLRVTLHQRKRLIAAQLGIAPETLSRVLRHLREHGLIAGTGNVLSLPQPRALQMVAGF
>gi|319762073|ref|YP_004126010.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MTRPEHAPALWEQESEDAGSPPWFPGPLVRKLLLVAAAAIVLSGALAAWWVSHAIAQDSMDRLVSQQNDE
VELVARLLASKIEQSQKVLSTVADSITPEMLDSPASLEWLLQQGLPAVRFFDAMQVARKDGDLRVNLRYG
KLAKASDLDPAERDYLVRTLLNGKPLVSGLIGSTAADARVMFTMPLLRAEGRVMGAVAGVLRLQSQGLLP
HSLALPERSESRLIVFTRDGVILSHPTLERVLGKVSDEPGLGEVYAQWRSADQPLAAGATTQLQGTHVVS
LASVPMPQWLVARVSDAQAMLEPLHGAQRRAWWLAAEATGAVCVLAVLAMVWLARPLALLRQRARAVLEA
EDREEEGAGEAGADGPWPRSSGEVDDVVRVCARLLESRRLGWRGAQVVERQLQAVLDHVPLGIALTRAEH
VEVVSLQACRLLGYTPAQLQGHSLLALLAPQEGGVDVAQRVHAEFAAHGVFDGELPLLRQDGGTLWVRAQ
GQPVQPGDPARGQVWTLEDCTAEREARLQQAWERTHDPLTQLLDRTEFKRRLQVLLAERAQRGPQQQPDD
GGGVLLFLDLDHFTVVNDVAGRDVGDAVLSHLARLLESEVRQTGWAARLGGDEFAVLLPGATLARGEAVA
ERLRAAVQAWEPAFQGRSFTLGLSIGLVPLVPGLREVSAVLHAADMACYEAKRAGRNRIHLGEVRALA
>gi|319762074|ref|YP_004126011.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MNPIPHSASAAPAAGEPPRLQLTGITKRYPAVVANDGVSLTVRPGEVHAVLGENGAGKSTLMKIIYGAVK
PDAGQMLFDGRPVQVRNPQEARQLGIAMVFQHFSLFDTLTVAENVWLGQDKSVPLAEVARRISATAAEYG
LDIDPQRPVHTLSVGEMQRVEIIRALLTAPRLLILDEPTSVLTPQAVDKLFVVLRKLASEGCSILYISHK
LHEIRALCTACTVMRGGKVTGVCDPSQESNASLSRMMIGAEPPQLAHRAQVPGEVVLRTRALSLPVADPF
GVALIDIELAVRAGEVVGIAGISGNGQKELLQALSGEDRRAEAAMVQLSGRNAGRLGPRRRRALGLHFVP
EERLGRGAVPTMGLAHNLLLTRGDAVGAGGWLRMGRLREQARGIIARFQVKAGGPDAAAQSLSGGNLQKF
IVGREIDAGPKLLIVAQPTWGVDVGAAAQIRGEILRLRDQGCAVLVLSEELDELFEICDRLHVLAKGRLS
PSVPRAEATVARIGEWMSGLWHAEVQAHLGAGEVGHAQA
>gi|319762075|ref|YP_004126012.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MLKLEARPQASRLWSYGSPLLALAITVLIGVALFAALGKDPVRGLQVFFWEPVKSPYALGELALKATPLL
LVALGLAVCFRSNIWNIGAEGQFVIGAVAAGGIALLADKTTGPWIVPAILVAGVLGGMAWAGITALLRDR
FNANEILVSLMLVYVATLLLGYLVYGPWKDPMGYNFPQTRMFERVTQMPKLFVGSRVTIGLPLALVGSAL
LWVFLFRTRAGFALQVGGLAPAAARYAGFSSRRALWAALLISGATAGLAGALEVAGPIGQLTPYVPAGYG
FAAIIVAFVGRLHPVGMVFSALLMSMFYIGGELAQSRLGLPKSLTGVFQGLLLFTLLACDTLIAYRVRWV
GARGGLR
>gi|319762076|ref|YP_004126013.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MESYALLLGSTLSAGTVLAIAALGLLINEKAGIVNLGAEGMMLCAAIAAFATVVHTGSFALGLLAGMAAG
AVLAALFGVLVIWFNTNQYATGLALSLFGVGFSAFVGIGYVQAKLPDTPKFSWPLLGDLPVVGQALFRHH
PLVYLTMVLVALMVWFLYRTRAGLVLRSVGESPESAHALGYPVRRIRLGAVMAGGALCGLAGAYISTVYT
PLWVEGMVAGRGWIALALTTFATWRPARVLLGAYLFGGVTMLQFHLQATGVQVASQLLSMLPYLATIVVL
ALISRNPAWIRANMPASLGKPFHPGS
>gi|319762077|ref|YP_004126014.1| basic membrane lipoprotein [Alicycliphilus denitrificans BC]
MNSLNKRTLLKTAALSAMALAALAGCGRKEEAAPAAAPAPAPAADKLKIAFMYVSPIGDGGWTYQHDLGR
KAIQEKYGDRIETSFVESVPESADAERVLRDMAAQGNKLVFATSFGYQEFVQKAAADLKDVKFEHATGYK
QADNVATYDTKTFEGAYLAGIVAGGMTKTKTVGVVASVPIPEVVRNINSFVLGAQSVDPGIKAKVVWVNE
WFNPPKEAEAASTLINGGVDVMYQNTNSPAVLKTAEERGARAFGKDGDMSSFAPKAHLGSAVIDWTPYYS
KVVDDTLAGQWKGGAFWWGVKEGAIDLRKIADDVPQEIKDRVEKARAGLKDGSFAVWTGPIKDNTGKELL
AAGQAADLKFLTGINFYVAGVEGKVPGTEGK
>gi|319762078|ref|YP_004126015.1| basic membrane lipoprotein [Alicycliphilus denitrificans BC]
MTDLHKRSLFKLAALSAVAAAALAGCGKKEEPAPAAPAPAAAPAEKPAEKPAPLKIGFAYVGPVGDGGWS
YAHDQARKKLQAEFGDRIQTSYVESVPEGPDAERVLRDMITQGDKLIFGTTFGYMDVMQKLGAEFPDVKF
EHATGYKTSANVRTYDSRTYEGAYLAGIIAGAMTKTGTLGVVGSVPIPEVLRNLNSFTLGAQSVNPNVKT
KVVWVNEWFSPPKETEAATSLINGGADVLFQNTDSPAVLKTAQEKGKRAFGWDSDMTAYGPKAHLASAVI
NWAPYYIKATKDVLDGTWSTGQSWWGVKEGAIDLVSIAEDVPAEIKAKVDEAKNGLKNGSFAIWKGPIMD
NTGKTVLEKDAVADDKFLTGINFYVKGVEGQVPGGEKK
>gi|319762079|ref|YP_004126016.1| fad dependent oxidoreductase [Alicycliphilus denitrificans BC]
MNTRSIASHPAAPSLWAATAPAAPDTPALGASVSTDVLVVGAGYTGLSTALHLAESGARVCVLDAHAPGW
GASGRNGGQVNPTLKYDPDDLVRIYGAERAEPLIDTVSRSADLVYGLIARHAIDCAPVRAGWLQVGYTQH
AVDGMHARARQWERRGVRVEMLDRAAVAARIGTPAFAGGWLDGRAGGVQPLAYARGLARAAQGLGVQVHG
GSPVVALERQGMHWIATTAQGHRVQAQQVVLGTNGYTDGLWPGLARTVLAANSFIVATRPLGPAGDGILP
GGETGSTSQRLLLYFRKDAQGRLLMGGRGHFADPQGPQDFSHLERAVALMFPQLGPLQYEYRWAGRIAVT
RDFMPHLHRPAPGITMALGYNGRGIAMATSLGRHAAALVAGSSAAACPFPVTPVQPIPLHGLQRFYIAAG
VAWYSLLDRLGA
>gi|319762080|ref|YP_004126017.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MIEIDRLEKAYGEHRVLQGVSLRVERGEVVCLIGPSGSGKSTVLRCINGLESYQGGEVRAFGERVDNRAP
SIHRLRSRMGMVFQRFNLFPHRTVIENVMEGPVYVKGEAPAKARAEALELLRKVGLADKAQAWPAQLSGG
QQQRVAIARALAMKPEAMLFDEPTSALDPELVGDVLEVMRQLAGEGMTMIVVTHEMGFAREVADRVCFLH
SGSIVEEGPAAQVLGAPRHARTQDFLRRVLHAPAGGAA
>gi|319762081|ref|YP_004126018.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MQAFLQHAREFLPILLQGAVVTVQVTVLSFLLSSAIGLVLALGKLSPVRAVSVCASTVINVIRGLPIIVQ
LFYIYFVLPDIGIQLSAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAALAMGMRPALLMRRVILPQ
AFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMTVYTLVALLYLAMSLPLVWSLRRL
ERRFGAGRKAP
>gi|319762082|ref|YP_004126019.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC]
MHRFIRRLHHIALGFCAAGAVTLAAAQGAAPATYNVGATATGIPFTFLDVKTNSIQGMMVDTIQAVAKAG
GFQVNVQQTVFSALIPSLTSNKIDIVSAAMLKTPTRQQVVDFSDPVYSYGEGLIVKADDAKAYATLDDLK
GEIVGAQVGTVFLDMLQKKGIFKEVRSYDSVADMTRDLALGRIKAGLGDQPIIAYQIRQNTFQGVKLAEG
YKPSNVGDVCLVVRKGDTATLERLNKAIAAIKADGTLAQIVKKWGI
>gi|319762083|ref|YP_004126020.1| transcriptional regulator iclr [Alicycliphilus denitrificans BC]
MNTSALPDEETNPLFNQSLEKGLAVLCSFSAQRRSMTLADVASAAGISKSSAQRMVFTLEQLGFVRKHPQ
TRRYQLTPRVMRIGYNYLAANPVIDLANPYLSELTNATTETSCLTEADGLEMVYVARFISAQFVPVHMPI
GSRIPMYCTASGRAWLSALPDGEALELLRASERVAHTRHTITDEAAILAELNQARQRGFAVNREELFLGD
MTLGAPVIGSHGRPVAAVHIVAPTSRWTPEEAERRLGPALLACARSLSNSVRAL
>gi|319762084|ref|YP_004126021.1| hypothetical protein Alide_1372 [Alicycliphilus denitrificans BC]
MGIQVIAQSATTPQLQDWGPVTVPLSTPACALRGLEVRLDGRPDSDMGLWECSPGRFQRQVASGEVMHIL
AGAGRFMPEAEGAAPVEFRAGDTLFFPPDTRGVWEIRETVRKLYVMV
>gi|319762085|ref|YP_004126022.1| adenosine deaminase [Alicycliphilus denitrificans BC]
MVKLPPIPPERLPGLLAASPKAELHIHIEGSLEPEMIFALARRNGVALPYAGVEELRRAYAFTDLQSFLD
IYYAGASVLLHEQDFYDMARAYLARAAGDNVVHAEIFFDPQTHTARGVAMEAVINGLYRACADARAEQGI
SASLILSFLRHLSEDDAFATLEQAMPLLDRIVGVGLDSSELGHPPEKFARVFARCRELGLHVVAHAGEEG
PPAYIWGALDVLKAERIDHGVQAVHDPALMRRLAQERIPLTVCPLSNQKLCVFPDLSRHNLKQLLDAGLV
ATVNSDDPAYFGGYVNDNFTQTFAALPALTARDAWQLAGNSFEASFAAAADKRAWQHRLEECFARHAGRG
>gi|319762086|ref|YP_004126023.1| palmitoyl-CoA hydrolase [Alicycliphilus denitrificans BC]
MAAHVLCVTPADALIDVPRSIRVERLAPGQPVTVAASTRRSGVQWRSEASFEAGADGVVDTARDAPVSGS
YSGASGMGLVWSQAPVGSKSRELFNQPVAEPLVTEITASAGGAQARATLVQRLAADGVTRRELREDGLVG
TLYLPPGPGPHPAVMVLNGSGGGINEPRAALYASRGFAALALAYFKAPGLSDYISNTPLEYFQKGLQWIR
REVRPLHDFVAVSGQSRGGELVLLLGATFARQVSAVVAYVPSAFVHSGQNACDPKIGREGPTWLLNGKPL
AHLWENNRTASWAPFDEGPEPHRHERAIRTALQDPGALARARIPVEAIEGPVMLLSGTDDGSWPSSVFSR
MVRDKLAEVRHPHDVQWLDFENAGHAILFPCVPTTQLVYAHPVSGKVSTGGGNPADNARADEQSWAGVLQ
FLRDAVAARGASQPS
>gi|319762087|ref|YP_004126024.1| extracellular solute-binding protein family 5 [Alicycliphilus denitrificans BC]
MKRLILSTLTASLLAAGAAAHAQTLSIGFADPLSSLDPQLNNHAGDRSVDLHFWDLLVENKANRLQPGLA
ESWKNLDPRTWEFKLRKDVKWHDGKPFTADDVIFSYQRARNVPGSVATFAGYLRTVESVTAKDPHTLVIK
TNIPNPDLPLNLASVHIVSKHVGEKAATDDYNAGRAVIGTGPYKFVSYTPGDRVVMTRNDAYWDGKPYWE
KVNYRYINNAAARTAALLAGDVDVIDKVSVSDLARLKQSSNITVFPYDGLRVMLLQPSFNPAQSPYLTDN
AGNPLPKNPLLDQRVRQALSIAINRKAITDRILQDTATEANQWMPKGTYGYNPEIKNIAFDAAQAKKLLA
DAGFPEGFKLTMHVPNDRYPQGPETAQAVAQFWTRIGVKTQVEVVPWSVYSGRANKNEYAMSMLAWGNGT
GEASYALVNVLATVDKAKGLGASNWGHYSNPAVDKALAESTAEFDTARREAILRASAKVVSDDAGIIPLF
HYRNVWAAKKGLKVTPMTSDRTAAMMVTRDGK
>gi|319762088|ref|YP_004126025.1| oligopeptide/dipeptide abc transporter, atpase subunit [Alicycliphilus denitrificans BC]
MTETPAAIELRQISKRFGERKPGLLDRLGLARPPAVTRAVDHVDLHVAEGEVVGLVGESGCGKSTLGRLA
AGLLAPSDGEVLVGGRRMADMDARQRHAARMRVQMIFQDPYASLNPRMRVDEIVGEAARIHGLVDAAGFD
DYVCAQMRRAGLDPALRHRYPHQFSGGQRQRIGIARALAVQPQVLVCDEAVAALDVSIQAQILNLFMDLR
QELGLTYLFISHDLGVVEHLSDRVVVMYLGRVIETAPVEELFGRPNHPYTQALLAEVPRMGARHKTYSAI
QGEIPSPLHPPPGCHFHPRCPHAMPRCKVEAPQLKGIAIRHLSACHLNDGS
>gi|319762089|ref|YP_004126026.1| oligopeptide/dipeptide abc transporter, atpase subunit [Alicycliphilus denitrificans BC]
MTIVPTLQVRNLQTHFHTRAGVLRAVDGVSFTLARGRILGLVGESGSGKSVTGFSIMGLVDPPGRVVGGE
VLFQGRDLTKLPPREMRALQGSRIAMIFQDPMMTLNPVLRVDTQMIEAVRAHERVSHAQARERARDTLGL
MGIPSPDERLLAYPHQLSGGMRQRVAIAIAMLHRPDLIIADEPTTALDVTIQAQILSEVQKLARQQGTAL
IWITHDLSVVAGLADEVAVMYAGRIVEHGPVDAVLDAPLHPYTTGLIGSLPSNNRRGQRLRQIPGMTPNL
LDLPAGCAFAARCPRAGEACAQQPGLTEPRPQRLVRCFYPMEAA
>gi|319762090|ref|YP_004126027.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MNTVALKHESPWRRNAGEFFASKTAVLGLGVAVLLIAAALLAPWITPQNPYDLNQLDVMDARLAPGALNG
EGTFHYWLGSDGQGRDLYSGILYGLRISLLVGVGSALIAGVLGTLLGLLAAYAGGKTDALIMRVVDLLLS
FPSILVAMMILAYLGKGVGNVVLTLVLLEWAYYARTARGQALVERRREYVEAARCLDIPGWRIMLRHILP
NCLPPLIVIGTLQIARAITLEATLSFLGLGVPVTEPSLGLLIANGYQYMLSGEYWISFYPGIALLVTIVA
INLVGDRLRDVLNPRTRRQ
>gi|319762091|ref|YP_004126028.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MTGWLLRRLAQAAVAVVLMTIIVFAGLHAIGNPVDILIGQDVDQVERARIIAELGLDQPLWRQYLAFVNG
ALHGNLGTSFVYNVPAVTLILQRLPATLELAIAALLIAVAVGVPLGLFAGLFPEHPLSKLLMAGSIVGFS
LPTFWVGLMLIMAFSVGLGWLPASGRGETVQLLGAQWSWPTLDGLRHLLLPAINLSLFKTSLVMRLTRAN
VREVMPMEFVKFARAKGLSPMRVVLVHVLRNTLIPLVTVLGLELGSTIAFAVVTESIFAWPGAGKLILDS
INALDRPVIVAYLVVVVCLFVTLNLIVDILYKVLDPRVRLEGAA
>gi|319762092|ref|YP_004126029.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MELRQLEAFAAVMSTGSVTAAGLLLGRSQPAVSRLVQELEAEIGYELFARNGPRVTPTEQGFLLYEDVEH
ALTGLQQIRRRAKEIEQGLRRPVRVVATTALAAGLVPQALARIEDGGAMGAIQLRSAAPERVVHDVLCGA
AHLGVTSLPLEHRGLQVHWIGQAACVAVLPASDPLARLERVPLAALAQRQIVTMTNPYRLRHRLDAEFAE
AGGATPRLIETNSSLNAMMMVRAGLGVAVLEPVTAHGVPLAGVVTRALDTDIPFLFGVVTRQAAPAQPSM
DALMAALADAAAALLPGFMLHDAAAHGALLQQAAQDLARSGPAEPVQTGGAA
>gi|319762093|ref|YP_004126030.1| arylformamidase [Alicycliphilus denitrificans BC]
MTRANPPRLWDISAPVHAASPVYPGDAPYRQQWSATIGPDSPVNVSCLMLSPHVGTHADAPLHYDNDGAA
IGAVPLDAFIGPCRVVHAMGCGPLVQWRHIAHAMTADLPPRVLLRTYARMPVDRWDASLTACAPETLERL
ADAGVVLVGIDTASVDPADSRRLPSHQVLRRRGLRVLENLVLDAVPEGDYELIALPLRLVTADASPVRAV
LRALA
>gi|319762094|ref|YP_004126031.1| hypothetical protein Alide_1382 [Alicycliphilus denitrificans BC]
MTLHPCLSCGACCASFRVDFSVHETEDLGGSVPRGLAVEVTEHTARMRGTDHARPRCAALTGQVGQRAAC
GIYEWRPSPCREFEAGSEACNRARRRYQLPPLDGPVL
>gi|319762095|ref|YP_004126032.1| feoa family protein [Alicycliphilus denitrificans BC]
MQQIGKGIAHGQPQGLDTLPRGVAATVAGLRQAQDAPTRAMVLRLMEIGFLPGEPVSVIAKGFPTADPLA
VRVGQATFALRRHEAAQILVHVGAAEGAA
>gi|319762096|ref|YP_004126033.1| ferrous iron transport protein b [Alicycliphilus denitrificans BC]
MSRTQAAAAASLTHIALLGNPNCGKTALFNVLTGARQKVANYAGVTVERKEGVCTTAGGRRVRVLDLPGA
YSLHAQSLDEAVTRDVVTGRRPGESVPELLVCVTDATHLRLNLRLVLEARELGLPMVLVLNMSDMARRQG
IEIDREVLARELAMPVVATVGVRSDGADELLRWLDQAEPPRAAPQPAAAAALSAGLPPVNALEDDQPQRV
QRLHQEVRRIMGLAVREPALRLQRDDRIDAVVLHPLWGMLLLAATLFLMFQAVFSWAEVPKGWIEGATGA
LAEWLKAHMAEGPLRSLLADGVIAGVGGVVVFLPQILILFFFILALEESGYLPRAAFLLDRVMGVVGLSG
RSFIPLLSSFACAVPGIMATRSIPDWRDRLVTILIAPLMTCSARLPVYALLIAAFIPERTVAGLFNLQGL
VLFGLYLGGIVSAMLVAAVARLARNWDGGGGGATPLLMELPAYRWPSVRNLALGLWERAGIFLRRVGGII
LAVTVLLWFLSTYPAPPEGAAGPAIEYSLAGRLGSMLETIFAPIGFNWQISVALVPGMAAREVAVSALGT
VYAIAATADDTAAQLAPMLASQWSLATALSLLVWFIFAPQCVSTIAAVRRETNGWRWPLVMTVYLFALAY
GASFITYRIALAFHGG
>gi|319762097|ref|YP_004126034.1| hypothetical protein Alide_1385 [Alicycliphilus denitrificans BC]
MLQELIVVLIVAAAVAYVAWRYLPAAWRQRLGRVHPSLAQGPGGCGSGDGCSSCGGCSAAQGPTAEPPVQ
GRAERRFHASK
>gi|319762098|ref|YP_004126035.1| hypothetical protein Alide_1386 [Alicycliphilus denitrificans BC]
MPEPLHPCLTCGACCHEYRVEFPVYELQSMGGSVPDALAHEVNGNRWRMNGTGQRPVRCVALVGRCGEQS
VCSIYAQRSSTCRNFEMGSQRCNEARQRHGLPPLDTPWDEFPLAA
>gi|319762099|ref|YP_004126036.1| hypothetical protein Alide_1387 [Alicycliphilus denitrificans BC]
MSERFKVGDHVSWNSEAGRVSGRIIAVHTSDFDYKGHPRRATPDDPQYEIRSDKTEHIAAHRGSVLQRL
>gi|319762100|ref|YP_004126037.1| hypothetical protein Alide_1388 [Alicycliphilus denitrificans BC]
MAQPFFTIGHSNRSLEDFIALLREARVACLVDIRKMPRSRAQPQFDGDGLGAALAGHGISYLHLAALGGL
RGRTAGVPPGRNGLWRNPSFHRYADHAGTPAFHEGLEQLLAQGQDRSCALMCAEALWWRCHRRIVADHLL
ARGRAVFHIMAPGRVEPARLTPGAVVAEDGTVSYPLP
>gi|319762101|ref|YP_004126038.1| ornithine carbamoyltransferase [Alicycliphilus denitrificans BC]
MKHYLQFADLGADEYNYLFSRAAIIKGKFKSYEKYHPLADRTLAMIFEKASTRTRVSFEAGMYQMGGSVV
HLTTGDSQLGRAEPIEDSARVISRMTDLVMIRTFGQDKIARFAEFSRVPVINGLTNEFHPCQIMADIFTY
IEHRGSITGKTVAWVGDGNNMANTWLQAADLLGFTVHVSTPGGYEVDEKLAFGGKPHRPGCYKVFANPMD
ACRDADLVTTDVWTSMGYEAENEARRKAFADWCVDAEMMAVAKPDALFMHCLPAHRGEEVMADVIDGPQS
VVWDEAENRMHVQKALMEYLLLGRIA
>gi|319762102|ref|YP_004126039.1| acetylornithine and succinylornithine aminotransferase [Alicycliphilus denitrificans BC]
MTALIEAASPHVMNTYGRVPIALERGQGVRVWDVNGKQYLDGLGGIAVNTLGHNHPRLVPALQEQIAKLI
HTSNYYHVPGQEELARLLTGRARMTNAFFCNTGLEANECAIKIARKYGVDKGIEKPEIVVYDHAFHGRSI
ATMTATGNPKVRNGFGPLLEGFIRVAPNDIEALQEATEGNPNVVAVLMEPIQGEGGLHPMRVEYLQQVRK
LCDANGWLLMLDEVQAGMGRTGKWFAHQWAGIVPDVMTLAKGLGSGVPVGAVLAHGAASEVLKPGNHGST
FGGNPLAMRAGVETIRIMEEEGLLQNAADVGAHLKAGLQQALGSVPGVNEVRGQGLIIGVELDRPCGVLI
DRAAQAGLLLSVTADRVIRLVPALTLTRAEADEIVALLTPLVQAFLAE
>gi|319762103|ref|YP_004126040.1| hypothetical protein Alide_1391 [Alicycliphilus denitrificans BC]
MVAPTSKEVFIQGITHDGRTFRPSDWAERLAGVMSQFRPGGARPGSHLSYSPWCVPTAMNGVKCVVVNRE
LQAYEPMAWDFVLNFAKDNNLQVVEACLLPDPKA
>gi|319762104|ref|YP_004126041.1| hypothetical protein Alide_1392 [Alicycliphilus denitrificans BC]
MVICLLTPFCAVRIARAPRGPCWPAQSPRTPRPARMSRRRAASAGGILVARLMKRGVAGVVTDGGFRDSP
DIARYSMPAYHSRPSAPTNLTLHEAIEINGPIGCGDAPVFPGDVIVGDAEGVVVIPAHMADGIAAEATEM
TVFEDFVQEKVMEGRSILGLYPPIDERTRTDFAAWRQACGR
>gi|319762105|ref|YP_004126042.1| hypothetical protein Alide_1393 [Alicycliphilus denitrificans BC]
MLTAYAGWDSPDFTFQDFRYFLNGKQIAGDSRSFVQRIESRGYSGPGEESIRVGDIVYVKWRHKPTGTVY
ENTIDLRGRLPAPIKEGGALYFVLAHETVHVYLVGPPQPWENRKPIYGCDKLKKIGKAEPTPDNRARAYN
CADKVWKVYPEQKLINVPLEQP
>gi|319762106|ref|YP_004126043.1| ribosomal protein s20 [Alicycliphilus denitrificans BC]
MASGKPKKKNPRLASGRKRARQGLKLNAANTSLRSKYRTAVKNVEKAVLAGDKTKATELFAKAQSVLDTI
ADKGIFHKNKAARDKSRLSAKVKALALAA
>gi|319762107|ref|YP_004126044.1| integral membrane protein mvin [Alicycliphilus denitrificans BC]
MSLFKAASTVSLLTLASRVTGLVRDLLMASIFGANVLTDAFNVAFRIPNLFRRLFAEGAFSQAFVPVLAA
HKARHGEEATRGLVDAVATALFWVLLLTCVLGAVGAPVLVWALASGLRQTAEGFDAAVFMTRWMFPYIGF
MSLVALSAGVLNTWRRFAVPAATPVLLNLCMIAAAWLGAPQLERRGIEPIYAMVGGVMAGGVLQLAVQLP
VLYRLGLLPRIGMTWGRVRSAWQDEGVRRILTLMAPALLGVGVAQVSLMINTQIASYLVPGSVTWLFYAD
RLMEFPTALLGVALGVVLTPQLAAARAAGDAERYSAMLDWGLRIVVLLAVPCAVGLLTFATPLVATLFHH
GALHDGDVGQIAVALAGYGVGLLGLVAIKVLAPGYYASQDIRTPVRIAIVVLVATQAMNVALVPLLAHAG
LALSIGLGALINALWLLAGLVRRGSFRPRPGWGRLALQVVGASALLAVFLAWASLHFDWLALRAHSVQRA
GLLALLLCASALLYFGALWACGLKLRDLLRR
>gi|319762108|ref|YP_004126045.1| hypothetical protein Alide_1396 [Alicycliphilus denitrificans BC]
MPLSYSVPTPLEYFAALVQGGQEEGIALLEAAACIAHVEYPDVDVQQFLDDMDRLQARLQRRMPAGAAPL
RRLNALNRFFYGELGFGGNLNDYYAPDNSYLHMVLRTRRGIPISLALLWLELAQGAGLKAQGVSFPGHFL
VKVLMPAGQVVLDPMTGHVLSREALSERLEPFRLRQGAAQEEVPLGLYLQAAPARDVLARMLRNLKEIHG
ARQDWRRQLAVQDRLVTLLPDAWGEWRDRGLAHAALGDARLAVQDLERYLAHAADAGDAQAIALRVKALR
GS
>gi|319762109|ref|YP_004126046.1| uspa domain-containing protein [Alicycliphilus denitrificans BC]
MTILVAYVPRPEGRAALDKGIEIATRRNERLVVVNAGPGGRQDDPNIVNGYEVERVEERLATLPIEAEFK
QFVRGKSTIEEIEEMVSALQVSVLVIGLRKRSPVGKLLLGSMAQEILLNVACPVLAVKATS
>gi|319762110|ref|YP_004126047.1| hypothetical protein Alide_1398 [Alicycliphilus denitrificans BC]
MPSELPPQGSPESPPAHRQAWAPATRGVVIASYLLMAGTLLLVMLRGLLPGLLCVCLGFLLTRWLAPRLV
RLRRLGPRGRGFSHSGQSMAAALVMLSPLLLLALALSHSRTYIVDAPQQYRELLDYLARTVLELRLKLPP
DIAAQLPAGTAEIQHVIASYLAAKAGALAMAGRAWLTGLLYAYVGLLIGALAAVRGTGTRRGPLTQQLVL
RVARMGEAFRQIVAAQFWIAAFNTLLTALFLLVVLPLWDLGLPYTPALITLTFLAGLVPIVGNLLCNAVI
TLVGLSVSPIAAVACLAFLILIHKAEYVINAKVVGKRTHMGVWELLSVMFVTEAVFGPAGLVAAPLFYAY
LKKELKAARLV
>gi|319762111|ref|YP_004126048.1| phosphoribosylformylglycinamidine cyclo-ligase [Alicycliphilus denitrificans BC]
MSSSATPPISYKDAGVDIDAGDALVERIKPLAKKTLREGVMAGIGGFGALFEVPKRYLEPVLVSGTDGVG
TKLKLAFEWNMHDTVGIDLVAMSVNDVLVQGAEPLFFLDYFACGKLDVDTAAAVVGGIAKGCELSGCALI
GGETAEMPGMYPAGEYDLAGFAVGAVEKSRILTGKDVAAGDVVLGLASSGVHSNGFSLVRKCIERAGADL
PATLDGKPFRQAVMEPTRLYVKNVLAALQQHPIKALAHITGGGLLENIPRVLPEGTAARLKAGSWPRTEL
FAWLQKTAGIDDIEMNRTFNNGIGMVVVVPAAAAEATAATLRALGEAVYAIGTIAERGTGPAVVVD
>gi|319762112|ref|YP_004126049.1| gamma-glutamyltransferase [Alicycliphilus denitrificans BC]
MRKRMLWIMAPLAAAAFLASCGGGHGQLPVVDNDPDSCTVRSSGGAPIVVGSGVSGDPAAPENASGYRLG
LTAKYSSKYMVVANTPLATKAGCDVLKAGGSAVDAAVAMQAVLGLVEPQSSTIAGSAFMMYYDAKARKVT
AYDGREAAPAAATGYYLSRQDQGDPGSSAPVPSARRSGRSIGVPGVMRMLDMAHKEHGMLAWSGLFDYGI
KLSTDGFQIPGRLGAAIASNAGNLALDANAMATYFHADGSPRTTGETMTNLPYAKTLKTLATQGADALYT
GDLAKAIVAKAAQSVGDDGAKTPITPSLMTLADLAGYKAKKRDPVCASYRSAYYVCTMAPPSSGGIAIAQ
SLGILGQFNLAQYGLANPANEGGVPSVMGVHLVSEAERLAYADRDKYVADTDFVPLPAQGLSSLLSPDYL
RQRASLISPDRSMGTAAAGDFGPVPQGVDKTVEHGTTHFSVVDAYGNVVSMTTTVESSMGSFHMVEGFLL
TNQLTDFSASPVDGSGQPVANRVAPGKRPRSTMAPTLVFKGSAPGDFVMATGSPGGGAIIQYVMKTVVGA
LDWGLDAQQATSLVNFGATNSPTTGVDGSNTTLDLAALVDGLKAKGHTVSTSAQSSGVATIMRVTKNGRT
LLEGGADPRREGIVLGDGSL
>gi|319762113|ref|YP_004126050.1| dnaa regulatory inactivator hda [Alicycliphilus denitrificans BC]
MSPMRQLALDIGLAPVPTLARFFAGPNEAALQHLRLAVEGASGGALRSCLPVYLWGEAGSGKTHLLKAVQ
EALRTQGVRVGWMQASTENPPAFDEDWAAVLLDEVHLYSTGQQAAAFNWFVNATSPATGAPRWVLAAGDL
PPADLPLRDDLRSRLGWGHVFQLHLLDEPARRAVLRQEADARGVFLGDEVMDYMLKRFSRDLGSLVQLLD
RLDSFALRTQRAITIPLLKTMLETE
>gi|319762114|ref|YP_004126051.1| had-superfamily subfamily ib hydrolase, tigr01490 [Alicycliphilus denitrificans BC]
MRLALFDLDHTLLPLDSDYEWGEFTIRIGWTDREEFGRRNKAFYDDYVAGRLDVHDYVRFATEAVRQRGA
QAAARAHAQFMRDVIAPAIHDEARALLQRHRDAGDEIVIITATNEFITRPIAQALGVQQLLALELERGAD
GWITGGIRGVPTMREGKVRRMEQWLAERGLRWQDVDSTFYSDSMNDVPLLEKVDHPVATNPDPRLRVLAR
ERGWPILDLFPSQQ
>gi|319762115|ref|YP_004126052.1| poly(a) polymerase [Alicycliphilus denitrificans BC]
MIKTFIDKLLGKGAAGAGRGARRRFGKREEVPASVHGIDPELVDRRATDVVRTLKQAGYEAYIVGGAVRD
LLLGLKPKDFDVATNATPEQVKGLFRRAFIIGKRFRIVHVVHGRGREHEVIEVSTFRAYMDNAAAEQVSG
NEKTSKAQLSGMQHAVDASGRVLRDNVWGPQDEDATRRDFTVNAMYYDPETQVVVDFHKGIEDAKRRVLR
MIGDPATRYREDPVRIIRAVRFAAKLSPLGFALEPKTAKPLLACEPLLQEVPQSRLFDEMLKLLQTGHAL
ASVAQLRGLGLEKGIYPLLDVVVGRADQPFVQAALADTDRRVGEGKTVAPSFLLACVLWQDVKAGWEQRL
AAQQHAFPALQEAIDDVFDKRIGDVSGRGKLAADMREIWVMQPRFEKRSGSTPFSMIAHIRFRAGFDFLR
LRADVGEVEEGLAEWWQEFSLADDARREDMIDQVREEQRVRQRKAQPAARRAPRAAEAVADAPSEEEAAP
ADAAAPKKRRRRRRKSPAGGANGGPASAAGDA
>gi|319762116|ref|YP_004126053.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Alicycliphilus denitrificans BC]
MSPAPAIGEADGAAVTAWIGLGANLGDARAALRGAVWAMGALPDTRVLRVSSLYRSAPVDAGGPDYLNAV
AELRTCLAPLRLLHALQAIEQAAGRERPYRNAPRTLDLDLLLYGEQRLGGAELTVPHPRMWERAFVLLPL
AELRPGWVAPARLQAVAAQRIERVDAPADWKD
>gi|319762117|ref|YP_004126054.1| glycosyl transferase family 2 [Alicycliphilus denitrificans BC]
MAASHEAAVQRALPSISCVVPCYNEADNLENLLPLLSARLASLAPQWEIVLVDDGSTDATGERMDRWIRQ
PGVHALQLSRNFGKEAALTAGLEAAAGAVVVMMDSDMQHPPALLDTFVRHWRAGADVVYAVREHRDAETA
FKRVGTGWFYRLINHGDRFEVPQGAGDFRLMDRRVVQALLALPERNRFMKGLYAWVGFESVAVPYLPDER
QHGRSYFNKLRLLRLAFAGLTAFTVWPLRAVIALGFVLALAAFGYGAYLTLVYLLYGHDVSGWTTIVVSL
MLFVGIQLVSLGVVGEYVGRIYEEVKRRPLYVVKRELGQGLRKDEA
>gi|319762118|ref|YP_004126055.1| glycosyl transferase family 39 [Alicycliphilus denitrificans BC]
MRAAASRTAWQGSLAVLALTFAWLAATAWMRPLMLPDEGRYATVAWEMLRSGDWLTPALDGMPFFHKPPL
FYWITGAALSVAGLTEIAARAASLVGATLGAFSLYLFTQRWSGGAAARRVLVLLLVQPLFFAGGQFANLD
MLVAGCITATVLALAHAALCFEQGLAYRRVLWLAYGLAALGVLAKGLIGFVIPAMVVGLWLVLRRRWRTV
AALLSLPGLVLFLAVAAPWFVAMQQRFDGFLHYFFVVQHFQRFAAGGFNNAQPFWFYPVVVAVFSLPAIL
WVRGVFARGYFTAGGVHGAVRLLMALAVGCVLLFFSLPQSKLLGYILPAVPPLAWLIADASMRANESASR
RNRWRATLACGALLGLGLVAGLAASQYHSTRGLGLALREHHQPGEPVFMLKAYPYDVPFYARLREPAFVV
DDWNSPDVARRDNWRKEVADAGAFAPLLAQRLLLTPEALPAALCREGVAWVVGASQLNEHYAFLEQAQVM
YMDRGESLWRVDARKGALATALDCAERPNGGSAGR
>gi|319762119|ref|YP_004126056.1| gtra family protein [Alicycliphilus denitrificans BC]
MSRRSTRLQHGRIGWFIVVGCAAAAVHWCVATSLVALAGWPPLRANVAGWLVALGVSFTGHHRLSFRGHG
SSIGRAGLRFFAISAGGFLVNESAYALLLRWTSVRYDVLLAAVLVGVAGVTYLLSRHWAFLRSPVP
>gi|319762120|ref|YP_004126057.1| ydjc family protein [Alicycliphilus denitrificans BC]
MGHETPQHSSWRHISICVDDFGLHEGINEAVFALTRQGRVQAVSAMVGGRAWEEGARALRTLDPRRVEVG
LHLDLTECPLQPALRTPLGRLIARAYLRRLDAADLRTEIRAQLDAFERAMGRAPAYVDGHQHVHQLPVVR
TLLLQELARRYPAGGLWLRATHSPQGAAHADARTGFKSHVIAFLGARALSALARRQGLRQNARLLGVYDF
TGGAQQYRARLGRWLRAARDGDLLMCHVGLPAQAPDVLARARQDEFAVIAAPDFETLLQGTRVRLRPMGQ
MLCQ
>gi|319762121|ref|YP_004126058.1| hypothetical protein Alide_1409 [Alicycliphilus denitrificans BC]
MNRRSILLTAAALGAALATPMGHAQDGPIRLVVPYAPGGPIDVTARALAERVRDSLGVVVVDNKAGAGGN
IGADLVAKSAPDGLTIGIAATATHAVNPWLYSRMPYDAAKDFAGITQMVRVPNVLVVNAARAEQLKIRTV
QDLIAYARANPGKLNYGSGGNGSAGHLAGEMFKQKAGIYALHIPYRGASPAQLALLAGEVDFNIDNLAAA
APNIKAGKLKALAVTSLAASPMLPGVPPLSDTFKGFSIDTWWGLVAPAGTPKPVIARLNKAFTDALKAPE
TKTRFEALMAEPVPTSPEQFDTFMAAERAKYQSVVKASGAKVD
>gi|319762122|ref|YP_004126059.1| hypothetical protein Alide_1410 [Alicycliphilus denitrificans BC]
MRNSLFSLALAGTLATGLAAPASAAEWPAADKPIQIIVPAPGGGGTGDTIARLMADRLGKRLKASVIVDN
RGGANGNIGASAAATAPADGSRLLFSWAGTLAVNPSLYRGLPFDPQKSFAPIALVADVPNILVVNNELPV
RDLAEFIHFAKANPGRLNYGSTGNGSSMHLAGELFKRETGAQLVHVPYAAPGQATTNLMANEIQAMFQLV
PGVVGQVKAGRLKALAVMSPTRSPALADVPTTAELGHPKLLSSTWFALLAPKGTPAAILDRLNTEVNEIL
QDPEVRKSLADMGAAPLGGSRQALAEHLAAETSKWARVVKESGVQVQ
>gi|319762123|ref|YP_004126060.1| uroporphyrinogen decarboxylase [Alicycliphilus denitrificans BC]
MQPMNHWQRIEAAIGGEATDRPPIALWRHFPEDDLHPDKLVAHTLQWQDKWQFDLVKFMPSGTYGVEDWG
AVSAYRGAANGAREVVQPAVLRTEDWRRIAPLDVRQGSYGRQNEALAAAARGLGGRVPLLQTVFSPLTTA
RKMSTEKMFADLRCFPDELERALMVITEVTIRFALDALALGAHGVFFATQQASHRLLSTAEYERFGKRYD
LMVFEALRDKARFNMLHAHGDDIMFDLLSDYPAEMFNWHDRLTDPTIAQAAERFPRLLVGGIDEHGTLLR
GSERDIEDQVHEALSQAAGRRLMIGPGCVLPVAATDASIRAAVRATHQFQEGLACA
>gi|319762124|ref|YP_004126061.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MQKLMHYSLVDIRLFVAVADAGNVSRGAAHCFLAPSSASLRIKQLEESLGTRLFVREARGVSLTRAGQVM
LEHCRRCLAELEQMHANLAPYAEGVKSHVTLFANSTAIASYLPEDLSVFLRAYPAVRVSLEERLSHEIVA
AVAEGRADIGVVTWSDEHPDVTFWPYHEDELVIVAPAATELGQDGKVRFVECLAHPIVSLASGTAIHTFI
AGKAAALGYPIDVRIQVAGFSAVVALVRSGAGIAIVPRSVMRNLQDDGVRTLTLLEPWAVRQLSVCARSD
EKLLSSHALALLQQLRGAYRGPAAG
>gi|319762125|ref|YP_004126062.1| pyridoxal-5'-phosphate-dependent protein beta subunit [Alicycliphilus denitrificans BC]
MPSIQVTSRSWVLEAVRRIERDFQRSSDTHLLQLDLPAMPQVRLYLKDESTHPTGSLKHRLARSLFLYGL
CNGWIREGTTIVEASSGSTAVSEAYFARLLGLPFVAVMPRGTSAAKIAQIEFYGGRCHFVGSSAQLYAEA
ERLARECNGHYMDQFTYAERATDWRGNNNIAESIFQQMRGEPHPTPAWIVVGAGTGGTSATIGRYIRYQG
CATQLCVVDPEHSVFHSYFHHRDASITSARGSDVEGIGRPRVEPSFVPDVIDRMERVPNAASYAAMRVLQ
RLVGRRYGGSTGTDFYVAMQLACEMAQRNQAGSIVALACDSGDRYMDSYYDDAWLASNHYDIAPYVAQLE
EAWLRGVWRDGGGSRPAAQPSASEAAALAAAG
>gi|319762126|ref|YP_004126063.1| oxidoreductase fad/nad(p)-binding domain protein [Alicycliphilus denitrificans BC]
MTSAQTAEATFQITVQPSGRAFEAQAGEPILTAAIRSGVGLPYGCKDGACGSCKCKRLSGSVVHGEHQHK
ALSVEEEEAGYVLTCCAKPLTDVVLESRQVTDESAYPIRKLPVRVSALTRASHDVMQVRLQLPANDSFRY
HAGQYIEFILRDGARRAYSMATAPHMQESAPGVELHIRHMPGGKFTTHVFGDMKEKEILRVEGPFGSFFL
REDSDKPMVFLASGTGFAPIKALIEHMQHKGIVRPATLYWGGRRPQDLYMDGWVRERLAAMPQLRYVPVV
SDALPEDGWTGRTGFVHQAVMEDIADLSGHQVYACGAPIVVDSARRDFVQQAGLPEYEFYADAFTSEADK
LAG
>gi|319762127|ref|YP_004126064.1| trka-n domain protein [Alicycliphilus denitrificans BC]
MPSNQNPLGALPARFRRQRLLIIGCGDVGLRVARSLGAGGPRPRVLALTSSPARVPQLRAAGVMPLVGNL
DDAASLARLAGLATRVLHLAPPPGEGAVGPRWWLDRRSTALVRVLRRRALPQALVYASTSGVYGDCAGEW
VAESRPVAPATPRAQRRVNAERAVRHLGRAGVRASILRVPGIYAPDREGGTPEARLRRGTPVLAAPDDVY
TNHIHADDLARACVAALWRGRPQRAYNVADDSQLKMGDYFDLAANLYGLPRPPRVARSLAQQQLPLSLLS
FMGESRRLVTTRMARELRLRLRYPTVREGLQRG
>gi|319762128|ref|YP_004126065.1| hypothetical protein Alide_1416 [Alicycliphilus denitrificans BC]
MSISLQPAAHMALAMAIAACCALPAAAQVMRCTDPATGKVTYTDGDCGRGEAAREVEARKSPQEIEQERE
QAAKALERKHERQQMEARQRRETQQAERSARPAAGSDPARSMECQRARKSLQDVLATMGQGMYDEQARLD
AAQRQADLACLSHAEYARAERSRGYRSVPSYYGPPMVVVPPRPAAPAPRREITHCNVFRCYDAQGNTYPR
>gi|319762129|ref|YP_004126066.1| hypothetical protein Alide_1417 [Alicycliphilus denitrificans BC]
MPLFHPLPSRTAAACMLGLLAAGCVAVPGDPYYDGGGYYSGSSSMTVYEQPGVIYTAPPLGWRDYPPPPP
GWREDAWRERQWREAQQRRDAQRREFDRRREADRREAERWETDRRREMERRAKEERLLQHPDPNVVRARR
EQFERERRAEMEAERERRNQGMDQRPGGPRPDWR
>gi|319762130|ref|YP_004126067.1| transposase is4 family protein [Alicycliphilus denitrificans BC]
MRGSQDFQGAMFSYISLEERVPQAHPLRKLRAVVDALLATMNREFEAVYARRGRPSVPPEMLLKALLLQI
LFSIRSERQLVEAINYNLLYRWFVGLNIEDKVWDHSTFSANRERLFNEDLARAFFERVKLSAQWGKLASD
EHFSVDGTLIDAWASHKSFKRKDDDSGTPPGRNPEVDFKGQERCNDTHESTTDADARLFKKSQGDKSRLC
HMGHILMENRNGLIVDVEITHASGTAEREAALAMLERRGNRNKRATVGADKGYDSKAFIKGCRKLKVTPH
VAAKDKHSAVDARVTRHEGYKTSLKVRKRIEEAFGWIKTVGGLAKTKLIGQAKLTGQALLCFATYNLVRM
GSIGGWWDAHHA
>gi|319762131|ref|YP_004126068.1| hypothetical protein Alide_1419 [Alicycliphilus denitrificans BC]
MIRRTALTLGMLALLGTTAHAQSSYPTKPIRLLVPFAAGGTTDLIARVVADPLGRELGQPVVVENKGGGG
GAIGAAETARSAPDGYNLGVATVSTTATNPAINPKIPYNVFTDFTPVVNIAATPNVIAANPQFAGKDYKS
FLAEVKKNPGKYSFGSPGTGSIGHLMMEMFMLETGAQMIHVPYRGSGPALNDAVAGQIPLIFDNLPSALP
FIKEKRLTALVVAAPQRLAVLPDVPTLAEVGAPNVNRMAYYGIVGPKGLPKDIVDKVNAAVRKVLKDPAI
RKRIEDTGSLIVADTPEKFAQEIKAEYTAYKNVVDKQKLTMD
>gi|319762132|ref|YP_004126069.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MSIPTPGALAGIKVLDLSRVLAGPWCTQMLADLGADVVKVERPAAGDDTRHWGPPFLQDGAGRDTREASY
FTACNRNKRSITVDMAHPEGQALLRRMAQQADVVVENFKVGGLTRYGLDYDSLRALNPRLVYCSITGFGQ
TGPYAGRAGYDLMVQAACGLMSITGHADGEPGGGPLKVGVAVIDVFTGLYASNAILAALNARNASGEGQH
IDMALLDVGMAVLANQAAGFLATGQAPGRAGNIHPSLAPYQDFQTRDGNVLLAIGNDGQFARFCAAVGHD
AWAQDECFATNTARVRHRAALLERLAPLMRQRSTAEWIALLEDKAVPCGPINTIAQAFDDPQVRARGTRV
DLPRDAGDGIATVATVASPMRLSATPVAYRSAPPALGQHTDEILRELGLDAPAIAALRESRAV
>gi|319762133|ref|YP_004126070.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MTRAAFQWDDPFQLDQQLTEDERAIRDAARAYCQDKLAPRVLDMFRHEKTDVGIFREMGELGLLGPTIPT
EYGGAGLNYVSYGLVAREIERVDSGYRSMASVQSSLVMVPINEFGSEAQKQKYLPKLASGEFIGCFGLTE
PDHGSDPGSMATRAYKVDGGYRLKGNKMWITNSPVADVFVVWAKEVEPSGAVGQIRGFILDKGMKGLSAP
AIHGKVGLRASITGEIVMDDVFVPEENAFPEIRGLKGPFTCLNSARFGIAWGAMGAAEFCWHTARQYTLD
RKQFGRPLAANQLIQKKLADMQTEIALGLQAALRVGRMKDEHQNVVEITSLIKRNNCGKALDIARLARDM
MGGNGISDEFGVARHLVNLEVVNTYEGTHDVHALILGRAQTGIAAFAN
>gi|319762134|ref|YP_004126071.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MRRHLPSTQALACFEAAARHESYTRAAQELALTQSAVSRQILALEDQLGVQLFRRTRHGVVLTPAGRHYG
RQVARWLQGLEQDTLDVMAHQGHGGALSLAAVATFATRWLIPRLPQLAERHPEIVIHIETQTRPFLFTDT
GFDAALYAGTPEQVANWPGVQAQLLMQEDVVPVCSPRLLEVAAQQSGMPRGTGRAHQGVPPQVLARLPLI
QQSTRPHGWRQWFDAMGVQDAPRALDGPRYELFSMTAVAAAHGLGVALMPPMLIEAEMARGELVVACPQP
LRGERGYYLVSPAQHQPPVLAAFAQWLGEMAAAGAS
>gi|319762135|ref|YP_004126072.1| lrgb family protein [Alicycliphilus denitrificans BC]
MMDALRTLAPWLAASPLPWLVLTLVAYALALALYRRSGAHPLLIPVLTAVAVAIMGIAEAVMAGPLLRLL
RVRDPAVRGFAIGLTAHAIGTARELQVHPTAGAFTALAMGLDGVATAVLAPVCVALLGWL
>gi|319762136|ref|YP_004126073.1| lrga family protein [Alicycliphilus denitrificans BC]
MLLLLAGLLALGRVPQALERAAGGLLQHTMLLFIPAITGVMLHFDRIAQEWRPFLVAGVAGAAVTLAATA
GTLHWLLRDSQSERPDEQERP
>gi|319762137|ref|YP_004126074.1| hypothetical protein Alide_1425 [Alicycliphilus denitrificans BC]
MATAQPLYHAPTFEPTVDEIATLKQLEMGQAIAVPDALKHHLSGRLLEWGYIGKSPAGIFHITDTGRKLI
KRQDN
>gi|319762138|ref|YP_004126075.1| hypothetical protein Alide_1426 [Alicycliphilus denitrificans BC]
MIPRIAHAHREPADQPVEPDIPAPPPEPADTPPHAAC
>gi|319762139|ref|YP_004126076.1| hypothetical protein Alide_1427 [Alicycliphilus denitrificans BC]
MLKRFFDPATIYARRVQSCLDEARMAALEHENAAEHHMALAKMYRHRVARLEAELAPEDRQASLVAQPAA
PMPHIAALKKHKETGQRQPAYLTQSAAG
>gi|319762140|ref|YP_004126077.1| hypothetical protein Alide_1428 [Alicycliphilus denitrificans BC]
MRKILGAIAMAGCMMTGANATIVYQFQVTSMECSGSHCEDWSSELNSLTISMSAPIGELNVRTVDWGTPI
ESTQYYNSNIVAVDFAALDIFVNMQEGRCESPVLCEMVATLQANDGYLQGIIRTLSTMYADTFMSTNGSD
LWSGYLNSDRGPTTPDNRPIYSGVWYAVPEPGALALLGVGLVGMVGVRQRRRTAAVAAST
>gi|319762141|ref|YP_004126078.1| phage head-tail adaptor [Alicycliphilus denitrificans BC]
MNAGKLDQRVTVERFTSTVDDWGTPIESWAPLFTCWAAVEPLVGREYIAAQALQSEVTTRIRMRFRPWMT
AQDRVIHNGTTYNIVSLIDVRSDHRELVLMCKAVG
>gi|319762142|ref|YP_004126079.1| uncharacterized phage protein [Alicycliphilus denitrificans BC]
MLTLAETKLHLRVDHDDEDALILAMIDTAASAVANDLNMEVIDLDTDAPAPVKSAALLLVGDLYANREAQ
TERPLTSNQTYARLLAPYRVYA
>gi|319762143|ref|YP_004126080.1| terminase [Alicycliphilus denitrificans BC]
MTMTRAARIIEFIERYCVTPEGAHVGQPLVLAEFQKQFLRDVYDNPAGTRRAILSIARKNGKSGLIAGLL
LAHLVGPEAKQNAQIVSGAMSRDQAALVFNLACKMVQQSPKLAPLVRIIPSGKRLIGLPMNVEFRALAAD
GKTAHGLSPSLAILDETGQVRGPQSDFVDAITTSQGAHEAPLLIAISTQAASDQDLFSQWLDDAQRSADP
RIVCHLYAAPEGCDLMDESAWRAANPALGLFRSEDDLREQMTQAQRMPSMENSARNLLLNQRVSTESPFV
SPDVWKANCANLRSFDGPVFAGLDLSARTDLTALVIVGQVDDVWHVQAHFWTPEQGLADRARRDRAPYDV
WHRQGFLRTTPGATVDYEHVAADMLEILADMDVQAIAYDRWRIDLMRKELDKLGADLPLIEWGQGYKDMA
PALDALEAELLNGRIAHGMHPVLTMCAANAVVTKDPTGARKLDKAKATGRIDGLQALAMAMGVASRAEQA
QFVGFDAFTFV
>gi|319762144|ref|YP_004126081.1| terminase small subunit [Alicycliphilus denitrificans BC]
MTKPRRTRSDSAKAAVQAHQNAAQAPIEPPVYVTLPDECRPFWQAIVTSRARDTWTESDLVTAANMARVQ
QALQEVAIGGDEHVKLTRLALALARSLSVHVTATAGRAADMVNASTAERSARQDDGDELIPRLRAV
>gi|319762145|ref|YP_004126082.1| hnh endonuclease [Alicycliphilus denitrificans BC]
MSTERTWPYQPTKRWTKANNGRLLPLNSDAWRKLRRQVLAEQPLCQYCPPGTITPATEVDHKNNDPADNS
RENLVSTCKPCHSIKTMADLYGRPARMGCDAEGNPINPAHPWNEKSR
>gi|319762146|ref|YP_004126083.1| phage portal protein, hk97 family [Alicycliphilus denitrificans BC]
MSIITRIKSAMGLESRSVLGVNGWPIPLSATSVTPESAQGVGACYAAVALIAEAIGSLPLRLYRRDGEDR
TTATDHPLHTVLHRAPNDQQSATEFWEWMVSSMLLTGNAYAKVSRGWDGQVRSLDPMVTSNVTIMRKGET
IAGYEYTNRDGVRERLLPAEVFHLRHRAGNDPLVGVSPITAARAVIQLAQAEAQHGQSTFDNGTRASGII
SMPGRLKPEQRQAIAASWASQYAGGANAGKVPVMEEGSTFTPISLSLADSEWVAARRFSVEEICRIFKVP
PVLIGDLSHSTYSNSVAMDMFFAKHTLGRHLSAIEGAINRQLLTPQAARSLYAEFSLEGLLRGSSQERAA
FYSSGVSDGWLKRSEVRKLENLPALPGVDDAPTGTATPAAKPYPSKQ
>gi|319762147|ref|YP_004126084.1| phage prohead protease, hk97 family [Alicycliphilus denitrificans BC]
MKLEIRNGELRASSPGRLTGYVARFNSETRIGDFAEVIRAGAFTTSLSDGRNIVALADHDRRALLGSTAS
GTLQLREDAHGLAFDLRLPDTSVGRDVAVLVESGLIRGASFGFMVPSGGDTWTDRGDGSMLRELRRVELH
EVTVTAQPAYPDTEVAKRSMPSVYELHRPGIGGNALWLETCR
>gi|319762148|ref|YP_004126085.1| major capsid protein hk97 [Alicycliphilus denitrificans BC]
MQLHQIREARAAKVSEARSLLASTPQLNAEGQAKFDKLKIEIQNLEADEQRAQFIEDAERRSLGAPVDKA
RNELEGQVNVLDAIAAQIENRSVTGALAEFQSEAKRQGLTARNGGVLVPTSIFEKRATMTTTGAAAVVPD
DYRADQFIGLLRNSLIVRSLGARVLTGLRGDTVLPKATGAATAYWLSEGDSLTESNTTYSSIKLEPKTVG
ALTAFSRQLALQSNPSIEALLRDDISAVVGLAVDKALLHGTAAAKQPVGILNVSGIQTASLATLSWAAIV
AMLEKLGLENITANAIVTHAKAATKLQTTLKDATAGSEYLMQAGRVAGLPAYVTNQLDAKTGTPNTGRVI
AGDFSQLVIGEWGATEVLANPYAAGYYEKGDVQLRIMHSMDAVVRHPKAFVVADDLGL
>gi|319762149|ref|YP_004126086.1| hypothetical protein Alide_1437 [Alicycliphilus denitrificans BC]
MANGRNRGHKGDSGRDAGGFIALPWSVLDCPAYAALSHPARALLFELARQFVRDNNGRLLASAAYLAKRG
WKSADVITRAKRDLIEAGFIHETVKGHRPNKASWYAVTWRALDKIPGYDPGAAATFVRGAYQKNAPLRPS
PGVERAPIAPSPGVESAPPRPSPGAIRGVFSTPPTPSHGNHLEMPSIGSRMQH
>gi|319762150|ref|YP_004126087.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319762151|ref|YP_004126088.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MKAYIDRHRDDYGVEPICRALQMAPSCYWRHAARQRNAQLRSARAQRDEGLKADIQRVWHANWQVYGADK
VWLQMNREGIVVARCTVERLMRAMGLQGARRGRAVRTTTPDTSAPCPLDHVNRHFHASRPNELWVSDFTY
VSTWQGWLYVAFVVDVYARRIVGWRVSRSMQTDFVLDALEQALYDRQPAAHALTHHSDRGSQYVSIRYTE
RLDQAGIQPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGI
PPAEAEANYWRQLAASDTSTKVST
>gi|319762152|ref|YP_004126089.1| hypothetical protein Alide_1441 [Alicycliphilus denitrificans BC]
MSKSTATRDQYKRIVEALRMRPQTSYDLRRLGIYQAPARIKELRDRHGYSITTDPVVIVDRDGYHHARVA
L
>gi|319762153|ref|YP_004126090.1| prophage cp4-57 regulatory [Alicycliphilus denitrificans BC]
MQPASVSRRHNRASSQTIQALHIPEALLKIQTVTAVTGMSESTIRRRVAEGKFPSPVKDGTRCTRWVAGQ
VSNWLRAKGAVQ
>gi|319762154|ref|YP_004126091.1| hypothetical protein Alide_1443 [Alicycliphilus denitrificans BC]
MDCFDNFDPIEGNVPLYPFYGLFDVAWKARELLAGLSKQDILWIEHEVDWQIEKARDLFAQAAERNQNRL
DDDSDDFDEEISEIEAMSFAVDAGLGTTNSDEPGHCPIRCAAVLALMFVANCINTLNCPEEDLGTADDGP
IGARLIPAANDAFNAALALGLALKYERHIEITNDLEIEMDERLADFNKDRARRAAMRKHGPTNQAKAFVT
AEWARHRSAYNGNKSAFARDYVRRIHNEYHVSITEKQMREVWLKDTPPASKPDGLPANG
>gi|319762155|ref|YP_004126092.1| hypothetical protein Alide_1444 [Alicycliphilus denitrificans BC]
MAETKSTENAMAADEWVSVPVITSAHAKAPKVDPYLKPGTVTTKAVSYGGVSLPPLMQGVEGGSALNGEP
KDYSVKVMWVNRRQIDAVLCAIESEQPELQAVLSAVRAFMCHLDSVRDEAKLGASLAKGALEAGNSEVAI
SNLNTVVKMLGRWNDEHRLYLH
>gi|319762156|ref|YP_004126093.1| integrase family protein [Alicycliphilus denitrificans BC]
MLTEIACKSTTCPADKPRVRFADSGGLYLEVTPNGSKRWFWKYRFDGKEKRIAFGSYPDVKLKEARTARD
DARKLHQQGIDPAQKRQLDRLENKRQADVTFEAVAREFHATKASGWSKQYGERWIERMEKDLFPWIGALP
LATITAPMLLHALRRTEARGAKETAHTLRQTAGQVFRYGIATGRCERNPAPDLHGALAPLNVKHMAAVLD
ADSAGKLMRAIFDYEGQPSTRAALELSALLFQRPGNIRHMEWVEIDLDAALWTIPADKMKRTIYGKTNGR
PHFVPLAPRAIQILKDLKPLTGHGKYVFPSLLTGERAMSENTIRTALRRMGYTNDEMTPHGFRAMARTIM
VERLNMHPDVIEAQLAHGKSGPLGAAYDRAQFMEQRRQMMNEWADYLDKLRTGADVIPLRA
>gi|319762157|ref|YP_004126094.1| peptidase m14 carboxypeptidase a [Alicycliphilus denitrificans BC]
MMTPKAPHHSTAWQPATALQSTSARALRQGWALVVAAVLSACSSTPLPPWTTQPPSAAQPPAAAQARRPV
PPPLGTAPRGEVPAAPVTITPIGPNASEPSAAAQLPYGEAVAARFPDPSVRYETPGLAEGRRAFTTNAEL
TQWLRDLAAAQHGATRMQMLDLGLSQRGTPIHALVLTRAAGTDAMALEAGRRPTVLLIGQQHGDEPAGSE
ALLVVARELAQGLLEPMLDRINVIVVPRANPDGADAGTRVTASGADMNRDHLLLQTPEAQALARLVRNYR
PMAIIDAHEYTVAGRFLEKFHAIQRYDVLLQHATTANLPEFMTKAALEWYRTPMVKALGAENLTQEWYYT
TSTRPDDLRISMGGTQPDTGRNVNGLKNAVSMLLETRGVGIGRTHIQRRVHSHVTAITSALRSTVERAND
LEQVRSYEARDISAQACRGDIVVEAGPTPTQRELVMLDPDTGADRTLRVDWNSSLELVTLKKRPRPCGYW
LAGGASEAVERLKLLGLQVMRVAEPGSILADTYQETGRTTAQRQDVRGTVAGGQGIIRVQVTPTRSAIDV
PAESYYVPLNQPLANLAVAALEPDTQNSYFANRLIPNLGDTARVMAPPSLVFEDTD
>gi|319762158|ref|YP_004126095.1| dead/deah box helicase domain protein [Alicycliphilus denitrificans BC]
MTFEELKLAPAILQAVQEQGYQNPTPIQAQAIPAVLAGHDLLAGAQTGTGKTAAFTLPMLHRLAQGQAPT
SRFGGRGVRALVLTPTRELAAQVEESVRTYGKHLDIKSTVIFGGVGMNPQIERIKRGVDVLVATPGRLLD
LQQQGFIDLSQVEILVLDEADRMLDMGFIHDVKKVLALLPKAKQSLLFSATFSDEIRELAAGLLNDPQSI
QVTPRNTTVQRISQVIHPVGRGKKKQVLLHIIQEHDWSQVLVFTRTKFGANNVAEYLTKHGVQAMALHGN
KSQSARTQALEGFKSGQIRALVATDIAARGIDIDDLPHVVNYEIPNVPEDYVHRIGRTGRAGKEGQAVSL
VCMDEEGFMMEIERFTKQEIPVQVIEGFGPDEGEKAEPIAMGRQTIWGGAGKPPSREVMQAAAKAARQEM
MERIRTNKATQGAPRGGRQGGQGEGQRATQGQGGGAGRGGNGGRPAGRGQQQPRNAGEGRRGGGNGGGGG
NRRFDDSQPRSENAHLGTQLAHVNLGPRHGGNRTSQPDPMRTSVDSMADRGRRGGFRSGGGGGGRGSRGG
GFGR
>gi|319762159|ref|YP_004126096.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MAQYVFSMNRVTKTVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSSLLKIMAGVDKEFEGEAIPMPGLS
IGYLPQEPQLNPEHTVRQAVEEAMAEVNNARARLEEVYAAYAEEDADFDALAKEQGELEAIIAAAGTDSE
HQLEIAADALRLPPWDAVIGKLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLHRFPGT
VVAITHDRYFLDNAAEWILELDRGHGIPYKGNYSEWLLQKQNRLEAEQKGEEARAKALKKELEWVRQNAK
GRQAKSKARIARFEELSDYEYQRRNETQEIFIPVADRLGTQVIEFHGVTKSFGDRVLIDNLSMNVPAGAI
VGIIGPNGAGKSTLFKLIAGKEQPDSGQVIVGQTVKMAFVDQSRDALANDKTVWEDVSGGLDIINVGKFQ
MASRAYCGRFNFNGQDQQKKVGNLSGGERGRLHLAKTLIQGGNVLLLDEPSNDLDVETLRALEDALLEYA
GTVLVISHDRWFLDRIATHILAAEGDSQWVFFDGNYQEYEADKKKRLGEEGAAPKRMRYKALK
>gi|319762160|ref|YP_004126097.1| trap transporter solute receptor taxi family protein [Alicycliphilus denitrificans BC]
MERLPRRLRTLLLSLRDLLLSAGPLAVLGVGLVVLAFQWLKPTPPHQVTLATGPAQSAYEAFGKRYQEAL
AANGIEVRLLPSDGSSANLQLLRSGQADLAFVQGGTGELRPGDGDELVSLGSLFVEPVWLFYRGDAARRA
HGTARLDGLHQLRGMRVNVGSPGSGVPTLMERLLAANHVPPADLALTQLEQTPATVELLAGRLDALVFAS
APESLMVQMLLQTPGVQLMGFAQNEAYGRRFPFLTPVTLPRGVVDLAANVPPRDVRLVASTTSLLAREGT
HPALLQLFAQAAQTIHGGAGWFNRAREFPSTRHAELPIAKEGERAINEPTPLLQRYLPFWIANLVERMWL
VLGILIAVMLPLSRVVPPLYQLRVRSRVFRWYGHLREIEDDMEAGRATPEELRERLTRLEHRVEKVSVPL
SYADELYALRNHIQLVRRRVPGA
>gi|319762161|ref|YP_004126098.1| peptidase s58 dmpa [Alicycliphilus denitrificans BC]
MQALSPHGASGAITDVAGIMVGHHSDTRRPTGCSVVIAPGGAVAGVDVRGAAPGTRETDLLAPGNLVQQV
HAVMLAGGSAWGLDAASGAVRWLEEQGIGLDVGVGRLPLVPAAVLFDLHVGDMRIRPDAAAGYAACAAAS
GRPPAEGNVGAGSGAVVGKTFGMQHAMKGGVGTASVTVDGVTVGALIACNAVGDVVDPDTGLPLAGARTA
DGSALRDARRALLRGEPPHQLLAGSNTTIGVIATDAQLTKVQAQRLAVAGHDGLARAINPVHTMSDGDTL
FALATGHAPRHPGMLVLATMAAEAVARATVRAVLAARTLATPEGLVLPSHAELAARG
>gi|319762162|ref|YP_004126099.1| hypothetical protein Alide_1451 [Alicycliphilus denitrificans BC]
MHDTNRRQWLTAIAAAAACTALPAIASNATAVEVWKDPSCGCCQDWIDHMQANGFAVTTHESGNAAVRAR
LGLPQRLGSCHTALVGGYLLEGHVPAADVRKLLKEKPKALGLAVPGMPVGSPGMDGPAYNGRKDPYDVLL
VTKNLMNSDVSTRVFTSYR
>gi|319762163|ref|YP_004126100.1| blue (type 1) copper domain protein [Alicycliphilus denitrificans BC]
MKTIKFIAACALLVSTSHVFSHENASHGSHAAPAPQQQAWGIAGQAREATRTITLRMTDDMRFTPAQFKA
RVGETVRLRVENKGKVLHEVVLGTQASLAEHAAMMREHPGMAHAEAHMAHVAPGGAQDLVWRFNRAGSFD
FACLVAGHYEAGMRGTFTVTP
>gi|319762164|ref|YP_004126101.1| hypothetical protein Alide_1453 [Alicycliphilus denitrificans BC]
MRRCTSIFLAILLVLRVLLGDAMAMGVAPQPAPHMAADMAHAASHGAHSGQDCCSPGEHAQHQADCTACG
ACHSAPGILAWMPAPPAAPGGAPLPQRDARFASAPAAQAIKPPIA
>gi|319762165|ref|YP_004126102.1| hypothetical protein Alide_1454 [Alicycliphilus denitrificans BC]
MSAPALPVPATMLAHTRTEDTVAIATGVTLVSVGVAFVASAGLLTGGITGLAFVLHYATGIGLGKLFFVL
NLPFYWLALRKLGLAFTLKTFVAVLLLSALTELQSRLLQITQPQPLYAAVTGGLIMGIGFLVLFRHRCSL
GGLGILALYLQDRFGWRAGKVQMAVDCCILLAALATVEPMRVLWSVIGAVALNLVLAMNHRPGRYIGA
>gi|319762166|ref|YP_004126103.1| heavy metal translocating p-type atpase [Alicycliphilus denitrificans BC]
MSHSHTSQPHAHSPGPGVAAALPSLDAPAGCSGCACGHGAQADDGHDHGALPGWPRIAAALALAAGAEGA
HWLQQDMAGMALAVAAVALAGLGVYKSGLKDLARLRLGIHALMAVAVTGAFLIGQWPEAAMVMALYVAAE
RIEDGAMDRARHAIRGLLQLAPPTADVVQADGSTQRLPVAQVPLGATVRIAPGAHVPLDGTVTHGSSAVN
QAPITGESRLADKAAGDPLYAGSVNQHGELLMQVTAEPAGTLLARIVRAVEQAQAGKAPIQRFVDRFAAV
YTPIVFALAVLLALLAPPLMGWSWTQAVYQALALLVIACPCALVISTPVTVVSALTAAARRGILIKGGGV
LESARGLRVLALDKTGTLTTGSPTLVHWQALDGADASAAASAAWQLASRSEHPVSRAIAAGLPAAGANGV
QQLQALPGLGVQAEIGGRRWLLGNLRLMREQGLVDAALEDTLAQHERQGRSVTLLADGQGVRALFAVADP
LRAQARQAMEQLRALGVHPVVLSGDNPATAQAIAAEAGVEDARGGLLPQDKLDALAALQRSHGPTAMAGD
GINDAPALAQADLGFAMGGAHSTGMAMETAGIVLMNDDLRRIPDTVLLARRAHRVLWQNIALALGIKAVF
CVLALLGQASMWMAVAADMGVSLLVVANGLRLRRWRHAAEK
>gi|319762167|ref|YP_004126104.1| transcription regulator merr DNA binding protein [Alicycliphilus denitrificans BC]
MLKQSPRHRIGNAARLSGVPPANIRYYEKEGLLPAQARADNRYRLYSDEEVHRLRFVRLCRAMDMSLDEV
RTLLALDVAAPTADHAACATLDEHLDHVRTRLAELRTLEQELLALRERCDGTGGHCHVIEALHERADADP
VPAPAPLARRHV
>gi|319762168|ref|YP_004126105.1| hypothetical protein Alide_1457 [Alicycliphilus denitrificans BC]
MTTTGLYPASLPRRAWALAVRWALAWWRIIDLGAVVLVLVLSPSSYRPAARERLARQMLADTAPILLGFT
ALAALLSLVITHIVVVTALSYGLTRYALEMVIRVLVLELIPLTAALFVAMRTTIPSGVQLARLRQTGRLQ
ALRERGADPVRMELLPRVLAGVHASITLAALSCAVALVMAYLGVYGFNTAGLPAYTRMFGQVFTPSITLV
FALKTLLFSLAVALIPMASGLYPPHSGTARDRQDQTGQGGLARMFAVLLLIETVSLMGNYY
>gi|319762169|ref|YP_004126106.1| mammalian cell entry related domain protein [Alicycliphilus denitrificans BC]
MNEPLPPPAPEELLRPVAHLRLKAAALLLLTLALIVGSVLYLLYARGAFEPTQPLVLTTDDSEGVSVGMD
MTFSGFPIGRVRRIELAGDGNVRILVDVAQRDAHWLRESSVFTLVRGLVGGTAIKAYSGVLTDPPLAAGA
ERPVLRGDATAEIPQLMATARQLLDNLQQLTAQESALGATLAQVRQLSERMNAPGGALGVLMGNEADARK
VLQTLERTNQLLARIDAMAARADRQVFGAAGAPGLVPELRAAVVQMNGLLQDARQSLLRVDAVLAEAQAV
GANAREATTDLGALRAQVEASLRKVDGLVNEINRKWPFARETELQLP
>gi|319762170|ref|YP_004126107.1| hypothetical protein Alide_1459 [Alicycliphilus denitrificans BC]
MKPLPCTVPLAALLAALLMTACGSRPPVPDWQMNAHGAAERATAAYLAGEDRVAQQEWARARAEVARTGR
PGLLARVELMRCAAQAASLEDGACPAFEPLRPDAAPPELAYADYLAGRATPAQAALLPPAQRAAAASVDA
IAAISDPLARLVAAGAAMQSGRATPQLLVLASDTAAAQGWRRPLLAWLLLRAQRAQAAGDTALADALRRR
IVVIESGGAPAAQAPKN
>gi|319762171|ref|YP_004126108.1| hypothetical protein Alide_1460 [Alicycliphilus denitrificans BC]
MQHPGTAQIRARRAAFRQLHAAGCFAIPNPWDAGSARWLAGLGFAALATTSSGLAWSRGLPDGKMTLPQV
LAHLREMVAATDLPVNADFEHGFAQDAEGVAHNVQQAIATGVAGLSIEDSTGDPAAPLLPLDSAVARMRA
ARAAIDASGEDVMLVGRAENFFVGHPDLDDAIARLRAYAEAGADCLYAPGIATREQIAAVVAAVAPRPVN
VLVGAAGALTMQDLAALGVRRVSVGGALARAAWGGFDRAARLLATQGRFDGFAGALPGKELNQFFGA
>gi|319762172|ref|YP_004126109.1| carbohydrate kinase, yjef related protein [Alicycliphilus denitrificans BC]
MQRISPAHPHALFDTAATRRIEAAAAAALPPHTLMQRAGRATARLALALAPHARTIWIACGGGNNGGDGL
EAAMLLQRGGHPVIVTWLGTPGTLPADARRSWQRAREAGVRFADAPPPLGPQDLCVDALLGIGLTAQARP
QPPDPRLTAWLAQMHADPAPTLCVDLPSGLIADTGQFAPGLAPATAGAPAAARHTLALLTLKSGLFTGHG
RDAAGSVWFDDLGVAAPAEAPGAWLAGPPPAAPRAHASHKGSYGDVAIVGGEGLAARGMGMTGAALLAAC
AALHGGAGRVMVALLDGGAATALPQQPELMLRRFDALALQSGAVVCGCGGGAAVAAVLPQVLREARRLVL
DADALNAIAADPQLQRQLRERALRPESATVLTPHPLEAARLLACDTAAVQADRLAAARALADRFGCTALL
KGSGSVVATPGQPPRINPTGNALLATGGTGDVLAGLAGARLAAAAQADAAAAFDAASHACWLHGAAADQW
PRARALTASALAQALGRA
>gi|319762173|ref|YP_004126110.1| d-amino-acid dehydrogenase [Alicycliphilus denitrificans BC]
MQIAIVGAGIVGAATAYELAADGHEVTVFEQRGAAAEEASFGSAGLLAPALLVPWAVPGIGPQRCAWGGP
TAPRLARGSGAAGLAWRWRWTQAGRRPEAPALLAALEGLGRYSLARTRALVQQLEVDIESSRGALVLLRR
PEDVEQLQPALQTLRDAGTAVRDVDADTARLIEPGLSADAPLAGALHAPDGEAGNCRLFAQILRQAAQDL
GARFVFGARVQALGGNPAGLQVAGEDAPRRADAVVLCTGLASTALLRPLGLRLPMAAVHGYSISAPLRED
THAPQGVVIDPLHRLSIARQGQRVRVSGGAELGHAGGAHHAPTLQTMYLALSGWFPGGALTSSPQVQVWR
GARPTLPDGAPVIGAGGPRGLWINAGHGACGWAQACGSARALADLIAGRAPDVDLQPFGIQRF
>gi|319762174|ref|YP_004126111.1| amidase [Alicycliphilus denitrificans BC]
MLADLVFTRSQVAAGHCSAPQELERSIAAAQGPACAHVFRQTCHEEARAAAAAPGVARLPLAGLAVSVKD
LFDIRGMVTAAGSTVLADAPPAPADCTAVARLRRAGAAIVGHTHMVEFAFSGVGVNPHFGTPAAHDARHG
ALPGPARVPGGSSSGAGVSVATGAAFIALGSDTGGSIRIPAALNGVVGFKNTARLVPTDGAVPLSTTLDT
ACALTRSVRDAIVAHEILAARRVTRSPAPLAAWRLAVPRTLFLDGMDGAVATAFERTLATLRRAGARIDE
IALPETAELAQINATGGFSAAESHAWHRALLQRHAGAYDPRVRSRIERGAAMSAADYIDLLHARRAWIAH
MEAAMAGYDALLSPTVPIVAPTIESVAPGGERDAEFFRVNGLLLRNTSVVNMLDGCALSLPCHHAGELPV
GLMAWHAALHDDAVLNIGLLIERELQEQ
>gi|319762175|ref|YP_004126112.1| ribosomal protein s2 [Alicycliphilus denitrificans BC]
MSVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAANRGTILMVG
TKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAGLESMSKKEQLMFSRELE
KLEKDIGGIQDMNALPDAIFVIDVGYHKIAVAEAKKLGIPLIGVVDSNHSPEGIDYVIPGNDDSAKAVAL
YARGIADAILEGRANAVNDVVKAAAGEGSDEFVEVDETAA
>gi|319762176|ref|YP_004126113.1| translation elongation factor ts [Alicycliphilus denitrificans BC]
MAAITASMVAELRGKTDAPMMECKKALTEAGGDMAKAEELLRVKLGTKAGKAASRVTAEGVVAASISGDV
GALIEVNSETDFVSKNDSFIAMANAAAKLVAEHNPADIEALGTLAYEQDGFGPTLEDVRKGLIGKIGENM
SFRRFKRFAGTSLAHYLHGSRIGVVVEYEGDATAAKDVAMHVAAMKPVALTSADVPAELIERERSVATAK
AAESGKPADIVAKMVEGSVQKYLKEVSLADQVFVKAADGKQTVAQMLKAANTTVKGFTLYVVGEGIEKKT
DDFAAEVAAQVAAAKAGA
>gi|319762177|ref|YP_004126114.1| uridylate kinase [Alicycliphilus denitrificans BC]
MTSATPAHKRILLKLSGEALMGDDAFGINRNTIVRMVGEVAEVTRLGVQVAVVIGGGNIFRGVAGGAEGM
DRATADYMGMLATVMNSLALADAMDKQGVTARVMSAIDIQQVVEPYVRPKALQYLEEGKVVVFAAGTGNP
FFTTDTAAALRGAEIGAELVLKATKVDGVYTADPMKDPQATRYARLTFDEAMVRNLGIMDATAFALCRDQ
KLPIRVFSILKPGALKRVVMGEDEGTLVYA
>gi|319762178|ref|YP_004126115.1| ribosome recycling factor [Alicycliphilus denitrificans BC]
MTIAEIKKNLDAKMDQSIAALKNNLSKVRTGRANPALLDSIHVEYYGSMVPLSQVANVSLLDARTISVQP
WEKNMGAKVEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGENAKVAVRNLRRDANEAV
KKLVKEKLASEDEQKRAEADIQKTTDKHIAEIDALVAAKEQDILAI
>gi|319762179|ref|YP_004126116.1| undecaprenyl diphosphate synthase [Alicycliphilus denitrificans BC]
MSTTAQTAIPHHIAIVMDGNGRWATRRFLPRLAGHRQGVESLRRCVRACVARGVGVLTVFAFSSENWNRP
ADEVSGLMDLLAKALAREVPQLSRDGVRLHFVGEKSGLSDKVRDGLRQAEAATAGNDRLVLNVCFNYGGR
WDIAQAAAQLAARGEPITESSLHAAMGMAHVPDPDLLIRTGGEKRISNFLLWQAAYTELYFSDRLWPDFD
EAALDEAIADYAARERRFGRTSEQLQAAAPGSLRA
>gi|319762180|ref|YP_004126117.1| phosphatidate cytidylyltransferase [Alicycliphilus denitrificans BC]
MLKQRVITALVLLAILLPALFYPSPVPFAAVALVFMGAGAWEWGRLNGLAGAASVGLGAVCVAMCGAAWA
TGWLHQPLPWLWAIGGGAWVLGGALLLRGGVAGWPHVPRALRVVGGVLALWLAWLAVAQARVAGINYLLS
VLTLVWMADIAAYFAGRAFGLRFTRSKLAPAISPGKSWEGVWGGMLGVLLLAVCWAWADAHWHAQVSSLY
SHLARRGWWLLPIGAVFMAAMSVVGDLVESLIKRSAGVKDSSGLLPGHGGVLDRIDALLPTLPLAMMLSQ
F
>gi|319762181|ref|YP_004126118.1| 1-deoxy-d-xylulose 5-phosphate reductoisomerase [Alicycliphilus denitrificans BC]
MKQRLTILGSTGSIGTSTLDVVARHPDRYEVFALSAATQVDLMLAQCARFRPRYAVMASAEHARQLDEKI
KANGLATQVLQAPEALETIASHEQVDAVMAAIVGAAGLAPCLAAARAGKRLLLANKEALVVGGEVFMKAV
RDGGATLLPIDSEHSAIFQSLPEDPATWARRVQHVLLTASGGPFRTRDPATLRGVTPDEACAHPNFSMGR
KISIDSATMMNKALEVIEARWLFDLTPEQIRVVIHPQQIIHSMVQFRDASVIAQLGTPDMRVPIACGLAW
PERVESGAAALDFTQLAALTFEEADARRFPGLHLSWQALAAAPGTTAVLNAANEVAVEAFLQRRIRFDQI
HALNLATLEAVQPSNPDTLQALLALDAQARAAARSLVQRFN
>gi|319762182|ref|YP_004126119.1| membrane-associated zinc metalloprotease [Alicycliphilus denitrificans BC]
MLLTIAAFAAALGVLIAVHEYGHYRVAVACGVKVLRFSIGFGRPLLRWQPKGSPTEFVIGAFPLGGYVRM
LDEREAPVAPEERHLAFNTRPLRARAAIVAAGPLANLLLAVLLYAAVNWSGVDEPKAMLSSPVAGSIAQR
AGVQGGEQVVGAAIGEDEPEPVRSFEELRWVLTRGALDAENVRLLLQPVRGAQREVVLPLEGMQVREADA
QLFRTIGIVGPWTRPVLGEVMAGGAAERAGLHPGDLVLRLGGTDVVDGAQLRDLIRGSVRDGKPLTQVWR
VDREGRMLDVTVTPQLVADATGPVGRIGAYVGNPPEMVNVRYGPVEGLWKGVERTWEVSVLTLRMMGRMV
IGEASIKNLSGPLTIADYAGRSASMGLTQYLAFLALISVSLGVLNLLPLPVLDGGHLMYYLWEGLTGRSV
SEAWMDRLQRTGVVVLLLMMSIALFNDLTRLFG
>gi|319762183|ref|YP_004126120.1| outer membrane protein assembly complex, yaet protein [Alicycliphilus denitrificans BC]
MRKHINRLGVRTVSAVAAMVFAANAAWALAPFKVQDIRVEGLQRVEPGTIFASLPLRVGDEYNDEKGAAA
IRALFALGLFKDVRLEASGNVLVVVVEERPTIADVEFAGTKEFDKDTLKKAMRDVGLTEGRPFDKALADR
AEQELKRQYINRSLYGAEVVTTVTPIERNRVNLTFTVTEGEPAKIKEIRIVGNQAFGESTLKGLFDQDTG
GWMSWYTKSNRYSRAKLNADLETLRSYYLARGYLEFRIDSTQVAISPDKQDISITINVTEGQRYVVSGVK
LEGNYLDRDDEFKSLVTIRPGEPYNADRVAETTKAFTDHFGNFGFAFARVEAVPEIDRENNRVALVLRAE
PSRRAYVRRIQVSGNNRTRDEVIRREFRQYEASWYDGDKIKLSRDRVDRLGFFTEVNVETQEVPGAPDQV
DLVINVAEKPTGSLQLGAGFSSAEKVALSFAIKQENVFGSGNYLGVDVNTSKYRRTLVFSTTDPYFTQDG
ISRTLDVYYRTAKPYENQGGNYELVTAGTSIRFGVPFSETDTVFFGGGLEQTQIKVGTNIPAAYLVYAEK
FGDTSWSLPLTIGWSRDDRDSALAPNSGRYQRLNTEWSVAGDARYVRGNYQIQQYIPLNKQYTLAFNGEL
GMGKGMNGRPFPVFKNFYSGGLGSVRGFDQGTLGPRDVTGASLGGPKKITLNAEFIAPVPGAGNDRTLRW
FAFVDAGNVYGEDENWELSDLRASAGLGLSWISPLGPLRIAFAQPVRKFAGDRIQKLQFQIGTSF
>gi|319762184|ref|YP_004126121.1| outer membrane chaperone skp (omph) [Alicycliphilus denitrificans BC]
MKSLSRHIPLVLLLGSLAAAVPAQAQEFKAGFVNTDRIFREANTAKAAQAKLEQEFSKREKELVDMGNAL
KSATEKFEREAPTMAESQRVARQRQLVDQDRDFQRKRREFQEDLGARKNEELGQVLERANRVVKQLAEAE
KYDVILQEAVYINPKHDITDKVIKAMNAAGNSGK
>gi|319762185|ref|YP_004126122.1| udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase [Alicycliphilus denitrificans BC]
MSLRLGQIVDALGGRLEGADRDTEIQRIAPLESAGPGDLAFLSNPRYRSQLAASRAACVIVAPGMREAAL
ERGACIVADQPYVYFARVTQLWVHAQGLGARAGIHPSAVVDAQAQVHPTATIGPLCVVERGAVIGAHTVL
KSRVTVGERCTVGARCILHPGVVIGADGFGFAHERGEWVKIEQLGAVRIGDDVEIGANTCIDRGALDDTV
IEDGVKLDNLIQIAHNVHIGRHTAMAGCSAVAGSTRIGAHCTIAGAASIVGHLELADNVHISTNTVVTHS
IARPGQYTGVFPMDDNAKWEKNAATLRQLYRLRERIKALEQARKDDQSATQQ
>gi|319762186|ref|YP_004126123.1| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz [Alicycliphilus denitrificans BC]
MMDIHQILKLLPHRYPFLLVDRVVELDRGKRIQAIKNVTINEPFFTGHFPARPVMPGVLMLEALAQAAGL
LSFDMMGEAPGDDKVFYFVGIDGARFKRPVEPGDQLILDVSLDRIKGGIYKFKGVARVGDSMACEAEIMC
TMRTVA
>gi|319762187|ref|YP_004126124.1| acyl-(acyl-carrier-protein)--udp-n-acetylglucosamine o-acyltransferase [Alicycliphilus denitrificans BC]
MTTIHPTAIVDPAAQLDPSVTVGPYAVIGPHVRIGARTSVGAHCVIEGHTTIGADNRIFQFASLGAEPQD
KKYAGEPTRLVIGDRNTIREFCTFNTGTVQDQGETRVGDDNWIMAYVHIAHDCVVGSQVILANSATLAGH
VHVGDQVIIGGLTGVHQYSRVGAHAMAGFASHVSQDVPPFMMVDGNPLAVRGLNIEGLRRRGFSAQRVAA
LKQAYRLLYRQGLTLEAALSAMGELPHSHPEAEGDIALLRDFVAASRRGIAR
>gi|319762188|ref|YP_004126125.1| lipid-a-disaccharide synthase [Alicycliphilus denitrificans BC]
MEHPPRVAMVAGETSGDLLAGLLLDGLRARWPGVASMGIGGPRMQERGFDAWWHSERLAVHGYSIELVRR
LWGILQIRKALRVRLLADRPDVFIGVDAPDFNLGLERDLRAAGVKTVHFVCPSIWAWRADRVEKIRAAAD
HVLCIFPFEPELLARHGIAATYVGHPLASVIPMAPDRLAARAQLGLTADDEVLAILPGSRSAEVAYIARP
FFQAAALIRKARTAIKIVVPAVPALRGRIEQIARECGVLESLAIVTGQSHQVLAACDCTLIASGTATLEA
ALFKRPMVIAYHMHPVSWRLMRRKQLQPWVGLPNILCRDFVVPELLQDAATPRALAAAVQQWLDAPARDP
GRIARLEQRFTALHEELQRDTPRLAAHAIAQILA
>gi|319762189|ref|YP_004126126.1| ribonuclease h [Alicycliphilus denitrificans BC]
MPLPRSLPEQASFDWHPGGLVAGVDEAGRGPLAGPVVAAAVILDDQQPIVGLADSKALTAARRERLFDEI
RAKALCCSVAEASVEEIDRLNILQATLLAMRRAVQGLRLKPTLALVDGNRLPRLDMPAEAIVKGDARVAA
ISAASILAKVTRDRWCAELHAQYPQYGFAGHKGYGTAEHLAALQAHGACPQHRRSFAPVARALALP
>gi|319762190|ref|YP_004126127.1| tRNA/rRNA methyltransferase (spou) [Alicycliphilus denitrificans BC]
MTAMQPVTIHSRDNALLKDLRRLSQDSTAYRKQGRVWLEGDHLCSAALARGQRPAIAVFSESFWPLAPEE
YAQAATKNVVIADALWQDISGLESPARMGFVLPLPAQQALDAQSPTVVLDRLQDAGNVGSILRSASAFGF
AQIAALKGTAALWSPKVLRAGMGAHFALRLVEGLDVQDIDRLRVPLLATSSHQGDWLHRAQLPWPCGWIM
GHEGQGVSPDLQRRASRHIRIVQPGGEESLNVGAAAAICLHASAAARA
>gi|319762191|ref|YP_004126128.1| integrase family protein [Alicycliphilus denitrificans BC]
MKAKITTQLLAALSPSTTTYEVNDTELRGFQLRVQPTGTKTFLVAYRLRDGRKNRYVIGRTPQLTPAQAR
DEAKKVLGDVARGIDPNDDKRQQRREERKPTLEVFIDEHYAPWARAHLGTADKTLARMRVAFKEHFDKRL
DSLTAWQFDKWKSERLKSGLKPTSVNRELASLRSALTKAVEWELIPEHPLRKVKQAKVDEDHRVRFLSDA
EETRLREVLDERDGNARAARVRHNEWRRQRGHEALPLIAEGTFIDHIRPMILVTINTGLRRGELFKLKRS
DIDMEKRMLKVRAAAAKSGKSRFIPLNDEAATMLTRWMDQHPAEDEELVFPGKDGAPLTNVDSAWGSIVR
AVKLKDFHWHDMRHHFASRLVMAGVDLNTVRELLGHADLKMTLRYAHLAPEHKAMAVAKLIRSV
>gi|319762192|ref|YP_004126129.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319762193|ref|YP_004126130.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MKAYIDRHRDDYGVEPICRALQMAPSCYWRHAARQRNAQLRSARAQRDEGLKADIQRVWHANWQVYGADK
VWLQMNREGIVVARCTVERLMRAMGLQGARRGRAVRTTTPDTSAPCPLDHVNRHFHASRPNELWVSDFTY
VSTWQGWLYVAFVVDVYARRIVGWRVSRSMQTDFVLDALEQALYDRQPAAHALTHHSDRGSQYVSIRYTE
RLDQAGIQPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGI
PPAEAEANYWRQLAASDTSTKVST
>gi|319762194|ref|YP_004126131.1| inositol phosphatase/fructose-16-bisphosphatase [Alicycliphilus denitrificans BC]
MPERISLTRYLVEQQRVHGHIPSELRLLLEVVARACKRIAQAVNKGELGEVMGTAGTENVQGEVQKKLDI
IANETLIEANEWGGHLAAMASEEMEGIYVVPNRYPQGEYLLMFDPLDGSSNIDVNVSIGTIFSVLKKPEG
HPGVHDEDFLQPGRCQVAAGYCIYGPQTTLVLTVGDGVAMFTLDREQGSFVLIRENVQIPEDTREFAINM
SNMRHWDAPVRRYIDECLAGKEGIRGKDFNMRWVASMVADVHRILSRGGIFMYPWDKREPNKPGKLRLMY
EANPMGWLVEQAGGAATNGKQRILDIQPTQLHERVSVILGSKNEVERVTGYHNGI
>gi|319762195|ref|YP_004126132.1| aminopeptidase n [Alicycliphilus denitrificans BC]
MKEGHTKATQRLDYAPPAYWIDSVELTFDLDPAKTRVLNRMRLRRNPGVAPQPLRLDGEELNLARVMVNG
AGSSFKMEGDKLVLENLPEGNDPFELEIFTTCAPAKNTQLSGLYVSGDTFFTQCEAEGFRRITYFLDRPD
VMASYQVLLRADKAQYPVLLSNGNLVESGELDGGRHFARWADPHRKPSYLFALVAGKLVAREQQIVSRAG
KPHLLQVWVRPGDLGKTEHAMNSLMAAIAWDEARFGLSLDLERFMIVATSDFNMGAMENKGLNIFNTKYV
LASEATATDVDFANIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSQDMAGSPSARAVKRI
EDVRVLRTAQFPEDAGPMAHPVRPDSYVEINNFYTVTIYEKGAEVVRMQHNLVGREGFARGMKLYFERHD
GHAVTCDDFVQAMADANPASPLALHLEQFKRWYSQAGTPHVKAVGQYDADARRYTLTLSQSCAATPGQPE
KHPFVIPVALGLLGTDGRALPLQLEGEAAAGGTERTVVLTEPSMTLAFVNVDSPPVPSLLRGFSAPVILD
CEYGDAELLALLTHDGDAFNRWEAGQRLMLRIAINAIADEEVTTDAAGQIHQNILPAALAQAMRDVLRHP
QLDAAFKELVLTLPSESYIAEQLGVVDPQRIHAVREALRQQLAVALQADWAWAWEEHHAGGAHRPDAVSS
GRRALAGLALSMLCLAARQSGDAVWPGKTYQRFKDAGNMTDRFNALSALVMSGHELAAPALARFHAMFKD
DALVLDKWFALQAGSTDRGGNVLPAVKALMKHPDFHIKNPNRARSVIFSYCSANPGAFHRQDAAGYVFWA
DRVLELDALNPQVAARLARALDRWNRLAEPYRTAAREAIARVAAKPDLSGDVREVVTRALAD
>gi|319762196|ref|YP_004126133.1| peptide chain release factor 2 [Alicycliphilus denitrificans BC]
MEAEHINQIGATLEDLANRTQELRRYLDYDAKYERLRTVNASLEDPNVWNDPKKAQELGKEKKLLDGVVL
TLQKLTAELADNAELYEMSREEGDEAGLLAIEGEAAKLLPLIEELEFRRMFSKEADPLNCYIDIQAGAGG
TEACDWAGMLLRQYLKYAERKGFKATVDEETPGDVAGIKSATIHIEGEYAYGLLRTETGVHRLVRKSPFD
SSGGRHTSFASLFVYPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGR
SQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWGHQIRSYVLDNSRIKDLRTNVEVSATQKV
LDGDLDVFIEASLKQGI
>gi|319762197|ref|YP_004126134.1| diaminopimelate dehydrogenase [Alicycliphilus denitrificans BC]
MGLDNNARTAIRIGIVGYGNLGRGVEAAVARNSDMAVAGIYTRRDPAQIEPMGAGVPVHAMDSLPGHKGS
IDVLVLCGGSKDDLPRQSPELAAHFSLVDSFDTHARIPEHFAAVDAAAQAGRTTALISAGWDPGMFSINR
VMGEALLPDGATYTFWGKGLSQGHSDAVRRVPGVAGGVQYTIPVDEAVAQVRSGLRPALTTREKHRRECF
VVLEAGADASAVRKTIVTMPHYFDEYDTTVHFIGAEELAREHGAMPHGGFVIRSGNTSQENKQVIEYRLQ
LDSNPEFTSSVLVAYARAVHRMQQAGQWGCKTVFDVAPGLLSPRSAAELRAQLL
>gi|319762198|ref|YP_004126135.1| alpha/beta hydrolase fold protein [Alicycliphilus denitrificans BC]
MYQALRHARTESVPIRTLRYHVRLWGDALPGQPPLVLLHGWMDVGASYQFVVDAFGAAFAAGRLIIAPDW
RGFGRSRLPGPCDGYPFADYLADLDQLLDHYAGGTPVDLAGHSMGGNVAMMYAGARPARIRRLVNLEGFG
LPATQPAQAPGRYAQWMDELRQFERGEMALKDYDSADGVAQRLMKTNPRLDAGKAAWLARHWAHKDAHGR
WHIMGDAAHKIVNPQIYRVDEALALYEAITAPVLSVHASSGSLGRWGERYTLQEYLQRLAHVRDHCTAVV
HDAGHMLHHDQPAQVARLIEDFVAAATPAG
>gi|319762199|ref|YP_004126136.1| extracellular solute-binding protein family 1 [Alicycliphilus denitrificans BC]
MQRSILAMALAAAGLWGAAQTAAAGTVTVITSFPKELTTAYQKAFEAANPGIKVEILNKNTTASVAYIRE
LPEGQRPDVMWASAPDAFEVLASYKLLQGAPEVVNRSAPEKIGNYPLNDPKGMYYGQALAGYGIEWNTRY
LKAHKLPVPKEWSDLVRPEYFGHIAISSPSRSGTTQLTVETILQGEGWDKGWTQLLQIMGNAAAVTDRSF
AVPDGVNNGQYGIGIVIDFLALAGKYSGYPVDFTYPSMTAVVPANIALIAGAKNADEAKKFMAYTMSVPG
QQLLFDPKIGRLPILPYSMLKPPAGYPVPQDIAKRAKVQFNTELSGQRYPVVISLFDQMVTFRLKELQAA
TKAIHEAAAALKARPNARGGELLAQARSLAYTSLVGADNVKNPEFLELFRKSRRDVAVSKQLTGMEQMWS
EKARANYERARQLAEEARGLAK
>gi|319762200|ref|YP_004126137.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MPATTLQTGARARSPRTLASPGPLIAFGLILAFLLCFLVLPVGTVIYTAFVTETGAPTLGHFGNFFGQLV
FRESFFNSLWVALASTFFASVIAVPLAYLTVRFEFRGALLIQTLGVLPLIMPPFVGAVALQLIFGRSGSV
NLLLDDWLGFTVPVMDGLVGVTFVESIHYFPFILLNLVAAMRNIDGAMEESALNLGAQGLRLFRRVIFPL
AMPGYLAGAALVFVKVFDDLGTPLVMGVSNMLAPQAYLRITSVGVDDPLGYVISVIMIGFSILALWLAAR
VMKGRDYATLQKGGNALQKRRLGRWESLLAYGWILLVLAVVLAPHAGILLMSFAKVWSFSVLPDAYTLEH
YATVFSDAGGMIGNTLLYCLLAAGLDVVIGTAIAYLILRTRLPARQWLDWLASAALAIPGLVLAIGYLRL
FKGVQLPGSDRLVVQTWVLIMLAYAVRRLPYALRSCMAALQQVHVSLEEAAQSLGASRLSTMRRVMVPLM
AGGILAGFVTSFITAAVELSATLVLVSTESQAPMSLGIYLYMQSIAGRGPGAALGVLAVAVVGLGTYFSH
RFVERSRAAVQPSSRA
>gi|319762201|ref|YP_004126138.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MNQASLECRHISLSYGTTPVLRDIDLRIEPGEFFALLGPSGSGKSTLLRLIAGFNQHQSGELLVDGQDIS
GVPPHLRNIGMVFQNYALWPHMTVWDNVAFGLVERRESRDAMRRKVGAVLDLVGLAQYARRRPAQLSGGQ
QQRVALARTIVIEPRLLLLDEPLSNLDKQLRVQMREELKNLQRKLGLTTVFVTHDQEEAMTTADRMAVLD
KGILQQVGTAAGLYDYPHNRFVAGFVGTANLLEGEVTAVSADTLTFHARGLGPLALARPAEPPAIGPAAL
AFRPHQVSMRPRGEPGDGARVWLDGLVESAEFLGEFSRYRVRVGEVALTSDQPHYAGRGMFAPGAQVRLG
LDPAQLRYLDR
>gi|319762202|ref|YP_004126139.1| aldo/keto reductase [Alicycliphilus denitrificans BC]
MNTLPLGRSDLRVTPICLGTMTFGEQVNEPDAHAILDRAVERGVNFIDTAEMYAVPAREATCGATESIIG
RWLGKRPGMRGRIVLATKVAGPSRGMPWIREGRGMTAADIVASCEGSLRRLQTDVIDLYQIHWPERHVPA
FGNLYYDPAKEVSATPIQEQLEALAGLVRAGKVRHVGLSNETPYGVHEFVRLAEQHGLPRVASVQNPYCL
LNRSWENAMDESCHRLGVSLLAYSPLGFGLLTGKFDRHAPTDPGAPQDARIARYESVRKQRWGRPEALAG
ARRYNQLAREHGLTPTQLALAFCYRSWRVASTIIGVTTLAQLDENLDAWGTQLSPELLAAIDAMRWELRD
PAQ
>gi|319762203|ref|YP_004126140.1| ybak/ebsc protein [Alicycliphilus denitrificans BC]
MAKKDKTVHVSETPATQMLRAHGVEFTEHPYDYVEHGGSAESARQLGLDEHMVVKTLVMQDQDARPLIVL
MHGDRKVSTKNLARQIGAKSVEPCRPEVANRHSGYLVGGTSPFGTRREMPVFIEESILQLPRIAINGGRR
GFLVQLDPQVCVQLLGARPVRCALAE
>gi|319762204|ref|YP_004126141.1| hypothetical protein Alide_1494 [Alicycliphilus denitrificans BC]
MSSVLLSLAATVAAYLLGSLSFAVIVSRVMGLSDPRTYGSKNPGATNVLRSGSKAAAAVTLLFDAAKGWL
PVALVRWFGAPYGLEEGTMALVGLAAFLGHLWPVFFRFQGGKGVATALGVLLGISGWLGLATLLTWAIIA
FFFRYSSLASLVAAVFAPFFYVLGGGVAWYMDARVGVAIAVMAGLLAWRHKANIQRLIQGKESRLGSKKT
>gi|319762205|ref|YP_004126142.1| metal dependent phosphohydrolase [Alicycliphilus denitrificans BC]
MAPSAQASPPEAADSEYEDLLGQWSDLESALSVLLARPRSVQNFPSKLRQCDLWLQDLVAHDIDAALYLM
LQLAATSTVGYSASHALVCATLCHILAPEFRLPAHERNSLVRAAFTMNIGMTALQDTLALQREELTPEQQ
QAVARHPQAGVELLEALRITDDLWLEVVARHHAPQPEASQLADLHAPERLARILSTIDRYAAMISPRKSR
TGRSATDSVRAIVGHDRELRDEVGLTLVRTVGLCPPGTFVRLDNAETAIVLRRSERANFPLVASVVDARG
EPHSSPTLYHTVRGQPRIQSALARSAVTVQLPHRVMVRLGLYAAHRTNTITG
>gi|319762206|ref|YP_004126143.1| hypothetical protein Alide_1496 [Alicycliphilus denitrificans BC]
MKRALLPCLSAVLALAASMPAHAQNVALAGILGGKALLVVDGSAPRGVAPGESHRGVRVVSVGRDEAVVD
SAGGLRTVRLGEAPVSVGGSGAGQRVVLKADARGHFVSSGMINGRVMQYMVDTGASTVAIGRPDAQRMGL
KFEEEGQSVMMNTANGVAQGWRLRLDSVRVGDVELRGVDAIVTPQPMPYVLLGNSFLREFQMSRNGDEMV
LHKRR
>gi|319762207|ref|YP_004126144.1| hypothetical protein Alide_1497 [Alicycliphilus denitrificans BC]
MPSFDTVCEANFVEVRNAVENTAKEIGTRFDFKGTSAAIELKDKEITLFGDAEFQLQQVEDILRGKLTKR
GVDVRFLDAGKPQKIGGDKLKQVVKVRSGIDSEQAKKIQRLVKDSKLKLQAAIQEEKVRVTGAKRDDLQA
AMALIRKDMADLPLSFDNFRD
>gi|319762208|ref|YP_004126145.1| udp-n-acetylenolpyruvoylglucosamine reductase [Alicycliphilus denitrificans BC]
MLVEKNVPLQSCNTFGIAARAHTLVRVRTPQDVYDLLADHRLARQPMFVLGGGSNIVLTGDVKPVVLKME
IMGLRLLEETAQAWVVEAGAGENWHDTVDWTLSQGWPGLENLALIPGTVGAAPVQNIGAYGVELQDRFHS
LVAIDLATGRPFTLDAAQCAFGYRDSVFKHSAPLAEHEGGGLPGHWGRGMGLAGRAVITHVRFLLPKAWR
PELGYLDLERRRAEAGVARPTARQIFDWVCEIRRAKLPDPAVIGNAGSFFKNPTVTPEQCQDIIARDPKI
VHYPMADGSIKLAAGWLIDACGWKGKTVGKAGVYDRQALVLVNRGTREDSVTGGEVMTLAKAIQTSVYER
FGIRLEPEPVVV
>gi|319762209|ref|YP_004126146.1| spw repeat-containing protein [Alicycliphilus denitrificans BC]
MRNMKSMKHWQDPLNALLGVWLALSPWVMGFESQMVPTASSVVAGLALIAVSLGAVFVPRAWEEWTQAAL
GVWMIASPWVLGFSGQMDVMRVAVASGIVVLALALWVLATDKDYSTWMHHGAAH
>gi|319762210|ref|YP_004126147.1| hypothetical protein Alide_1500 [Alicycliphilus denitrificans BC]
MTLVQAPHSRVPFYLSLLVAFHIAIVIASNYLVQLPITLLGFHSTWGAFSFPFIFLATDLTVRLIGKASA
RRVILRAMLPALLASYVVGVLFHEGRFNGAGALGDFNTFVFRIAFASFAAYVLGQLLDIQVFDRIRQKSS
AWWLAPAAASVFGQALDTAAFFAIAFWRSSNAFMAAHWVEIAWVDYAIKLGVSLLLFVPAYGVLLAAVVR
WLRQDPLPLAAAR
>gi|319762211|ref|YP_004126148.1| exsb protein [Alicycliphilus denitrificans BC]
MSAPDRRRALVLLSGGQDSATCLAWALARYAHVETIGFDYGQRHRAELDCRQRLRAGLQAMPWSGRLGPD
HLLTVDVLAQLGGSAMTEEVAIAMQQDGLPNTFVPGRNLLFFTLAAALAYRRGLQVLVGGMSETDYSGYP
DCRDNTLKALQVALSLGLDRPLTLETPLMWIDKAGTWALAHQLGGDALVELIRRDSHTCYLGQRDRLHDW
GYGCGRCPACELRAQGWAQWAEKNRPACE
>gi|319762212|ref|YP_004126149.1| hydantoinase/oxoprolinase [Alicycliphilus denitrificans BC]
MQVQSRVQVLGIDAGGTMTDTFFVRDDGRFVVGKAQSNPGDESLAIYQSSQDALAHWKRTVEDVYPELVT
GVYSGTAMLNRVLSRKGLDVGLICNKGFEQTHSMGRALQSYLGYALEDRIHLNTHRYDEPLVPVSRTRGV
TERTDVQGKVVIPLREDEVRQATRELVDAGSQAIVICLLQSHKNESSEQRARDIVREELRRLKSDIPVFA
SVDYYPSRKESHRMNTTILEAYGAEPSRQTLKKVSDRFKKHGAKFDLRVMATHGGTISWKAKELARTIVS
GPIGGVIGSKLLGEALGDENIACSDIGGTSFDVALITKGNFAIKSDPDMARLVLSLPLVAMDSVGSGAGS
FVRLDPYSKSIKLGPDSAGYRVGTCWPESGLDTVSVSDCHVVLGYLNPDNFLGGAIKLDVERARQHIKAQ
IADPLGLSVEDAAAGVIELLDLTLSEYLRANISAKGYNPADFTCFSYGGAGPVHTYGYTEGVGFKDVVVP
AWAAGFSAFGCACADFEYRYDKSVDVGVAQHAPDADKEAACQALQQAWSELAVKVIDEFVLNGYKPEDVL
LIPGYKMQYMGQLNDLEIVSPVTSAATAADWDRIVEAYEATYSRVYARSARSPELGFSITGAILRGTVVT
QKPVLPEDPDAGSTPPKEAYLGTRPFYRKKHWVDAALWRMEGLKSGNHIVGPAIIESDATTFVVPEGFET
TIDKHRLFHLKEIK
>gi|319762213|ref|YP_004126150.1| hydantoinase b/oxoprolinase [Alicycliphilus denitrificans BC]
MNMMSSKEVGFADLLKNGQTLKQFRDGIVERTQATGHYNGLDRLEFRDTDPIGYEKLFSKLRGGLVHARE
TAKKIAASPIVEQEGELCFTLYNAVGDCVLTSTGIIIHVGTMGAAIKYMIENNWEANPGINPGDMFTNND
CSIGNVHPCDIATIVPIFWEGRLIGWVGGVTHVIDTGSVTPGSMSTGQTQRFGDGYMITCRKTGVNDVPL
RDWLHESQRSVRTPKYWILDEKTRIAGCHMIRELVEDVIRADGIEAYEKFAYEVIEEGRRGLQSRIKAMT
MPGKYRKVSFVDVPYKHEDVQVSNAFAKLDSIMHSPCEMTIKADGKWRLDFEGASRWGWHTFNAHQVAFT
SGIWVMMCQTLVPTQRINDGAYYATEFRLPKGTWCNPDDRRTGHAYAWHFLVSGWAALWRGLGQSYFSRG
YLEEVNAGNANTSNWLQGGGINQDGEIHAVNSFEASSCGTGACAVKDGLNHAAAIWNPEGDMGDVEIWEM
AEPLLYLGRNVKANSGGYGKYRGGCGFETLRMVWNAQDWTMFFMGNGYMNSDWGLMGGYPAAAGYRFEAH
ATGLERRIANGESVPLGGDIDPSAPIYEHHIDATAQVKRDKQCMTTEDCYDNHDLYLNYLRGGPGFGDPI
DRDPKAIETDLNQKFLLPEYAQKVYGAVFTQDAKGAYTVDAAKTRARRAEMRKERLARALPTREWMKEER
ERILNKDASTQVQHMFATSFSLSEKFTKQFKDFWSLPDDWELREEDLGVPTYGSKYRMDLSLLPDVTTVV
QVEE
>gi|319762214|ref|YP_004126151.1| acetone carboxylase gamma subunit [Alicycliphilus denitrificans BC]
MSTYTNEQVARLVDGSLDWETTFRMLSMPKDGSRFEQYLAALQAQVKFPDRIVLPLGPHLYIVQSAKTKQ
WVTQCDCGHVFGDYRENWKMHAHVYVRDTEAAMTEVYPKLMAPDTKWQVYREYYCPSCGTMHDVEAPTPW
YPVIHDFEPDIETFYKEWVHMPLPERAG
>gi|319762215|ref|YP_004126152.1| sigma-54 factor interaction domain-containing protein [Alicycliphilus denitrificans BC]
MAPERKDFFSNPQDEYDVMNAWHSFLGGGERPVDTLRALVDASWQRSLEARVDPRMRSGPRPLAEGELYL
LRERQRELLEASAPVMAHARDFLTETGTLMALADTRCTILNTEGDLPAIDSAETIHLMPGATWSEGACGT
NAIGTALAVGKPVQIHSAEHFCEGIKRWTCSATVMRHPLDGEVVGVLDVSGLSQTYNRQTLALVVTAASR
IEARLAAAEMERRYRLLDRAMGRLSGGDGVVLFDRRGNVVRANEHAALAIRSADGEMELAQGLRRVPGFA
VGQQGQLAAGLLPSWVKPEWIEPLIVDGKPLGTLLVVPRSPASGWRADAGGAAVGAVPCSGMAADSFAAI
VTMDAGMNATIAKARQLARTRMPVLLQGETGVGKEEFARGIHGNRGGPFVALNCGGLSRELLASELFGYA
DGAFTGARKGGMVGKIEAADGGTLFLDEIGEMSLDMQPNLLRVLEQGEIYRLGENTPRRVNFRLVAATHR
DLRQDIAAGRFRMDLFYRIAVTNLRIPALRERQGDVEVLAQHFLERFRRAQGQGPERITPDALRVLRSYP
WPGNVRELRNLVEGLVLLCEEPSVTCAHLPHEFQAVHDAAQPGSCNPSGAMSMAEGEEDLIRRAIRASEG
NLTLTARKLQIAKSTLYAKMHRYGLSRDDK
>gi|319762216|ref|YP_004126153.1| argininosuccinate synthase [Alicycliphilus denitrificans BC]
MATILQSLPVGQKVGIAFSGGLDTSAALRWMKNKGAIPYAYTANLGQPDEDDYDAIPRKAMEYGAEAARL
VDCRTQLAHEGIAAIQAGAFHISTGGIAYFNTTPLGRAVTGTMLVAAMKEDDVHIWGDGSTFKGNDIERF
YRYGLLTNPSLRIYKPWLDQQFIDELGGRAEMSAFMTKEGFGYKMSAEKAYSTDSNMLGATHEAKDLEYL
SSGIRIVNPIMGVAFWKPEVEVPAEEVSVTFDEGQPVALNGKEIADPVELFLEANRIGGRHGLGMSDQIE
NRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRLNGLKLGRLLYQGRWFDPQAIMLRETAQR
WVARAVTGTVTLELRRGNDYSILNTESPNLTYAPERLSMEKVEDAPFSPLDRIGQLTMRNLDISDTRGKL
GVYARAGLLSLGGNAALAQLEDGSTKK
>gi|319762217|ref|YP_004126154.1| hypothetical protein Alide_1507 [Alicycliphilus denitrificans BC]
MTTEKIAGVSVATRANVYFDGKCVSHGITYPDGTQKSVGVVLPATLTFGTGAPEIMECVAGSCEYRLAGS
DAWLAAGPGDKFSIPANSSFDIRVAEAFHYICHYG
>gi|319762218|ref|YP_004126155.1| 17 kda surface antigen [Alicycliphilus denitrificans BC]
MNKTIILTALATAALAAQAQEQGRVFSATPVTQQVAVPRQVCGNETIYGGARPTTGAGAVLGAIAGGAAG
NAIGGGSGRAAATALGVIGGAVLGNQVESGRPGYQNVQRCTTETYYDNRVVGYDVVYEYAGRRYTTRTQS
DPGQWIPLSVQPAVPGVPGYPPDYPSDHPSGYAPGYGGYAQPGVVVSTPPGPPAYVVEPPPTVIEYRAPY
GYPHRPPHYYGRY
>gi|319762219|ref|YP_004126156.1| arsenate reductase-like protein [Alicycliphilus denitrificans BC]
MSTPTIIVYGIPNCDTVKKARAWLQEQGLPYRFHDFKKQGVPAERLPAWMAAVGWDRLLNRQGTTWRKLD
PTVQGRVHDAASAAALMAEQPSVIKRPVVEWSGTSTDRVTVGFQADQWNELAGGGSNA
>gi|319762220|ref|YP_004126157.1| folc bifunctional protein [Alicycliphilus denitrificans BC]
MRGSATIRPAMHTIPPTLESWLAHCERLHAKNIDMGLARVGEVARRLALRFDCPVITVAGTNGKGSTCAM
IEAVAMQAGYRTGVYGSPHLVRFEERCRIRGETVDAASLVPHFEAVERARTQGDEVSLTYFEFTTLAILR
LMSMSLLDVAILEVGLGGRLDATNVIDADCAVITSVDIDHVEFLGPDREAIGREKAGIMRTGRPVVVSDP
VPPQSVIDHAREIGADLWRFGHDFNYSGDKQQWAWAGRSRRYAGLAYPALRGANQLINAAGALAALEALR
ARLPITAQAVRLGLARVELPGRFQIVPGQPTLVLDVAHNPHAVAALTANLDAMGYFPTTHAVFGAMADKD
LAPMLAKVGPIIDRWYFTDLPTPRAESAAALQQKWNALQMVAGGRRPVSTSLHTSPEEALRAAVEAADPA
DRIVVFGSFYTVGGVLKDGVPRLQAKHLSA
>gi|319762221|ref|YP_004126158.1| sporulation domain-containing protein [Alicycliphilus denitrificans BC]
MAFFKFRWPGRQEPQGDSSKPARRSRGTAQAESIEDMRRRARHRLIGAVVLVLAGVVGFPMLFDTQPRPV
AVNMAIDIPDRNKVAPLVVPHKGGEAAAPAAEPPAAGLDAGEEVVASRPRGEPAPGQRAQAEPRHEPAPE
QRTEPKPAPKVEHKAEPKPEPKPEPKTEPKTEPKTARQEDAARARALLEGRAQPPAAAAAGEQGRFIVQV
GAFADSDKAREVRERLERSGLKTYTQVVDTKDGKRTRVRLGPFDSRAEADKAAGRVKGAGLSASVLSL
>gi|319762222|ref|YP_004126159.1| colicin v production protein [Alicycliphilus denitrificans BC]
MAALDWIFLAVLAASLLLGAWRGLVFELLSLAGWVVAFFAAQWFAGDVGAWLPMGQSDAAWRHVAGFALV
FVGSVFACGLVAWLLKKLVEAVGLRPADRALGALFGVLRGLVLLLAVVLVAGWLQVQEAPWWKESQAAPM
LQGALKGLRPVLPDELGRHLPS
>gi|319762223|ref|YP_004126160.1| amidophosphoribosyltransferase [Alicycliphilus denitrificans BC]
MCGIVGVVSTAPVNQLIYDALLLLQHRGQDAAGIVTQQGRKFFMHKAKGMVRDVFRTRNMRALPGVVGLG
QVRYPTAGNASSEEEAQPFYVNAPFGIVMVHNGNLTNAKQLRRELAETDHRHTNTESDSEVLLNVLAHEL
ARASSGSPLKDEDVFAAVRAVHRRIKGSYAVIALIAGYGLLAFRDPFGIRPLCMGKGADGTVMLASESVA
LEGTLHQLERDVAPGEAVFVRLDGRVLTQQCAENPHLNPCVFEYVYLARPDSVLDGISVYQARLNMGETL
AKRVISTVPPSEIDAIIPIPESSRPSAMQLAQLLGIPYREGFVKNRYVGRTFIMPGQGTRKKSVRQKLNA
IASEFKGRRVLLVDDSIVRGTTSKEIVQMARDAGAVKVYLASAAPPVRHPNVYGIDMPTRTELVAHNRTV
EEIRQVIGADALIYQDVDAMKQAVGKINPRVEGFEASCFDGLYITGDISDEDVTALNEGRERGGDEEPED
TSRLSLPNAEAL
>gi|319762224|ref|YP_004126161.1| o-succinylhomoserine sulfhydrylase [Alicycliphilus denitrificans BC]
MTDKTLPAGLHPDTLAVREAVERSQWGEHSEALYLTSSFVQSDCASAARRFANEEAGYTYSRTSNPTVTS
FERRLAAMEGTECAVATATGMSAILLVALTALKAGDHVICSQSMFGSTIKLLGTEMARFGVETSFVSQTD
VQAWKAAMRPNTRLLFAETPTNPLTDLCDIAALAELAHAHGALLAVDNSFASPVLQQPVRFGADLVVHSG
TKLLDGQGRVMAGAVCGTVALVDKVMGTFLRSGGLNLAPFNAWVVLKGLETLGLRVKAESAAALELATWL
EAHPKVARVYYPGLKSHPQHELAMRQQNGMGGTVLAFDVAGQGAQQLRANAFHVVDSTRVCSITANLGDV
KTTITHPASTSHGRLTEEQRQAAGIGQGLIRISVGLEHLGDLQNDLARGLDTLP
>gi|319762225|ref|YP_004126162.1| glutamyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MTSTKVRTRFAPSPTGFIHLGNIRSALYPWAFARANGGDFILRIEDTDLERSTQASVDVILEGMAWLQLD
HDEGPYYQMQRMDRYKEVLAQLQAAGHVYPCYMSVQELDALRERQMAAKEKPRYDGTWRPEPGKVLPPVP
EGVKPVLRFKTPKDGVVGWDDKCKGRIEFQNSELDDLVIARPDGTPTYNFCVCVDDMDMRVTHVIRGDDH
VNNTPRQIHIFEALGAQVPVFAHLPTVLNEQGEKMSKRNGAKAVTQYRDEGYLPDAMVNYLARLGWSHGD
DEIFSRAQFLAWFDLDHLGRSAGQFDEAKLRWVNAQHLKAMDDAQLADMVEPFAVKAGVAASQLDERLPR
ICALFKDRCETLVDLARWIAVFYADAVERNADDYARHVTEAAQPLLDAFAAALQTVEWNKEAIAAAIKDV
LKAQGAKMPQLAMPVRVLTMGTAHTPSVDAVLELLGREKILARLKSR
>gi|319762226|ref|YP_004126163.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MDIKGKVFIVTGGASGLGEGTARMLADAGGQVVIADMQADKGEAVAREVKGAFVRCDVSSEADGQAVVAK
AVSLGKLMGLVNCAGIAPAEKTVGKNGAHALATFTKTITVNLVGTFNMIRLAAEAMSRNEPEPTGERGVL
ISTASVAAYDGQIGQAAYSASKGGVVGMTLPIARDLARSGIRNMTIAPGIFGTPMLFGMPQEVQDALAAG
VPFPSRLGTPQDYARLVRHIFENDMLNGEVIRLDGAIRLAPK
>gi|319762227|ref|YP_004126164.1| hypothetical protein Alide_1517 [Alicycliphilus denitrificans BC]
MEAELRRIQRELPVVQEKLAALDATMAAINPLVAPDAAGTVKAWAGKYGERGAVKDCVLSHLQAAGKSGI
DVSTLTLQVAAALSVDLPTKKDFSLFRRDTVHAVLKRAKADGLTEVLVAARGGHTPQVWRWRGPHAAPSL
AELQDLREALELANKGG
>gi|319762228|ref|YP_004126165.1| hypothetical protein Alide_1518 [Alicycliphilus denitrificans BC]
MSPVPNIKDIGRGNESGTLDQDDVPLRRTRTPSDLKWTVNELAAVKGEIEHIDREVTRLKQRRARLMRMA
KALSTVTQVIAAEVHPAAVEPVHAHTRYGGRGNLRKYLRETLKAAHPGAVPTNVLAEGAVQVFGLRFSSC
QERARFADNNLGNALRRMCARGEVERLHDYAGLPTMSGVWRWKTPTPSLDELRKEEAVAGQHRRDASWR
>gi|319762229|ref|YP_004126166.1| hypothetical protein Alide_1519 [Alicycliphilus denitrificans BC]
MALTKTRTRTQTALTRLALLIANVHGELALVEGKRTANPC
>gi|319762230|ref|YP_004126167.1| transposase is66 [Alicycliphilus denitrificans BC]
MVIDEQALSELDAEQLREVTQRLLAELRHQRALNEKLTYECALLKRLKFAAQSERHSADQKSLLEDEIDA
DLAAVAVEIEQLQPPAAAPEAKQQPKRQPLPAHLPRREIRHEPESTTCACGCRMQRIGEDVAEKLDYVPG
VFTVERYIRGKWACTQCETITQAPVEAHVIDKGIPTAGLLAQVLVAKYQDHQPLYRQENIFGRAGLAIPR
STLAQWVGTCGARLQPLVDALKAEVLGHRVLHGDETPVAMLKPGSGKTHRAYLWAYAPGAFEATRAVVYD
FCESRAGEHARAFLGDWRGSLICDDYAGYKASFSQGVTEAGCLAHARRKFFDLHAAGKSQIAELALMQFA
RVYEIERQVQPLAAPERLQVRQQHSRPILDALHQWMVLQRQQVAGNSATAKALDYSLKRWAALTRFVDDP
QLPPDNNWIENQIRPVALGRSNWLFAGSLRAGQRAAAVMSLIQSARMNGHDPYAYLKDVLTRLPTHKASR
IEELLPHRWQPIDI
>gi|319762231|ref|YP_004126168.1| is66 orf2 family protein [Alicycliphilus denitrificans BC]
MIRIDEAWLATTPLDMRAGTDTALARVIATFGAAHPHHAYVFANQRANRLKVLVHDGVGLWLAARRLHQG
KFVWAPAGSPNVALEHAQLNALVLGLPWQRVGSQGAISVV
>gi|319762232|ref|YP_004126169.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MLKDPQTPRYAQRRTHRTYTPQFKAELVAACRQPGASVAAVALQHGMNANVLHRWLKEWAQGFHRLEAGV
STAVVASPPPAFIPIDLSAVPPASAGELPSASLPTPADGIRIECQRPGMSVTVHWPLSGAAECAQMLREL
LR
>gi|319762233|ref|YP_004126170.1| hypothetical protein Alide_1523 [Alicycliphilus denitrificans BC]
MTVGDIAMQEEANRQRTEEQAQARADAESEFQARKAAIVASIKAKRDAGRYEDALAEVARHATVSSDPVL
AQLKTSVEEAARQTEAAACMASLAEKQAQYSSLFQQARFEEAAEVLKRCSVVTNAPELREKIAAALAQPY
VRVLDDKTATLQDKQSALRSLDSISNAIAEPYQQVVRNLELKEEERRAAAERKRKKSEGVSIGMSKEDVL
ASNWGAPERINRTTTSYGVREQWVYGSQNYLYFQNDVLVTIQN
>gi|319762234|ref|YP_004126171.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MVVQTLVDEHGMSERRACQASGIARSTLRYRAVARDDSGVIAFIQTHMALNPRHGFGLLYDSARHQGKPW
GKTVLWRVYCELRLNLPRRGKKRLPARIKQPLQAAGQPNQGWSCDFMADALWSGRRFRTFNVIDEFNREG
LRIEVDTSLPAARVIRALNELVEVRGAPLSIRLDNGPEFIAHALAQWAQSKGIALNHIQPGKPTQNAYVE
RFNKTYRTEVLDCYVFDSLQEVRDMTADWLHRYNHHRPHEALGRIPPVEYRVKLFPNLYF
>gi|319762235|ref|YP_004126172.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MKKSRFSEAQIVGILKEVEMGAKVGETCRKHGISEPTYYKWKSQFSGMTVSHLAQLRQLQDENAKLKRMY
ADLALMHHALKDVVDRKL
>gi|319762236|ref|YP_004126173.1| transposase [Alicycliphilus denitrificans BC]
MSAAMTINDAVAEGPKRFPLRKRTGTAAHHMSKAAVGFGLDDLDALTPKEVVFFMADLLWGSHKEMACPH
CGTADTHYWTVKELRWKCKGCGKRFSVTSGTVFADRKLPLVKILKMAFSWANGAAGKPALQLRRDWNVTY
KTAFTLAHKLREGLLRGFNVGALCGIQEMDGMDINGRRYREKRNKPLGRGAAGKPKIPAHLLKPSVDPET
GEIQGPPKPPKWDKTAKQPADRRLLLVIRQRSQAKKKGAVATRIGIALSETAATVVAMAKKFASAESSVM
SDEDPAYYSFSKLFTQHQTINHSKGYSDGKGVSNNLAESFNWRMRRSAEGIYLSPSNKYLADYAAENAWR
EDTRKLSTRDRLRQLLRTAMGVGLSQWWRGYVQGLHREHELLVEGEQPAKGRGRPKGWRPRPPR
>gi|319762237|ref|YP_004126174.1| hypothetical protein Alide_1527 [Alicycliphilus denitrificans BC]
MLHVTVHIGELENRSLHNQLLSLDIAYDKVEALASYLVAMLPRQGSEMAGHLRDYPRWSGSLWDLVARAI
AQVVYPNQAIPPAIKPDRRCAYASRICVAVEAEDMGSRGRLLANAEIAQLEGQRGMYRAVFREDILGERS
AEFAYGSKRMDYADFVMRAICWALYDQDTLGPRPKLLLPQTMTANGVECFDVQGLAEPARTGFTRYLARK
YPTQAPAALARADDYVAFLFNKS
>gi|319762238|ref|YP_004126175.1| hypothetical protein Alide_1528 [Alicycliphilus denitrificans BC]
MRVKVKLLQHKGRALKRPELLDVPPFEGVLKVNEARDYDLSRAVVRARLIQATSGLQTDVLPELSDVRLV
WAEDNKLRLTGFEEVDGAAYAQTWVVETA
>gi|319762239|ref|YP_004126176.1| lexa repressor [Alicycliphilus denitrificans BC]
MTEHDEKHLAKLRTHWKRHAAFPSMAKLCETVGLSSTSSVFALVGRLVEAGYLERVDGRIAPTRKFFARP
LLSPVRAGQPQPASQEEPEVLTIDDYLIDDPNRTSLHKVRGDSMKDAGILEGDLVVVEHHTPTKPGDIVV
AWADNELTVKTLLLDPQSRYYLQPANSAYKPIFPATSLEVMGVVIGVVRKTRR
>gi|319762240|ref|YP_004126177.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319762241|ref|YP_004126178.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MKAYIDRHRDDYGVEPICRALQMAPSCYWRHAARQRNAQLRSARAQRDEGLKADIQRVWHANWQVYGADK
VWLQMNREGIVVARCTVERLMRAMGLQGARRGRAVRTTTPDTSAPCPLDHVNRHFHASRPNELWVSDFTY
VSTWQGWLYVAFVVDVYARRIVGWRVSRSMQTDFVLDALEQALYDRQPAAHALTHHSDRGSQYVSIRYTE
RLDQAGIQPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGI
PPAEAEANYWRQLAASDTSTKVST
>gi|319762242|ref|YP_004126179.1| extracellular solute-binding protein family 1 [Alicycliphilus denitrificans BC]
MHKPMKSLLAICVLATAGAACAQEQVVNLYSARHYATDEALYSGFTKATGIKVNRVDSDDAGIMARLKAE
GTASPADVILLVDAARLYRGEADGLFLPVRSKVLEDAIPANLRATPAADGGIAWFGLSTRARVIVYNKAK
VNKDDVDTYEELGAPKNKGKLCIRSGSHPYNLSLFGAVTEHMGEQKAEAWLKGVVNNLARAPKGGDTDQI
KAVAAGECDIAVTNSYYLARLMRSEKPEDKAVVEKVTVVFPNQQSWGTHMNIAGGAVARHTKHQANAIKF
LEYLASPEAQNYFANGNNEWPAAKGVDPGNPALKAMTDGKPFKSETIPISAVGANTVKVQQMLDRVGFR
>gi|319762243|ref|YP_004126180.1| phasin family protein [Alicycliphilus denitrificans BC]
MSLTPEQILASHKANIETLFGLTNKAFEGVEKLVQLNVAASRAALTEAATHAQAVLSVKDAQELLALQAG
LFQPLAEKAAAYSRHVYEIASGTGAEFGKAFESQAAEAQRNFSNLVDTAAKNAPAGSETTVAVFKSAVSA
ANNAFESVQKAVKQASDVAEANFNAVANSAANAAKTVEVAARKR
>gi|319762244|ref|YP_004126181.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MNALSVPPSTALVPPRPRPQPRDAYRAFRSIGTRWMDNDIYGHVNNVVYYSWFDTAVNAYLIEQGALDIH
QGDTIGLVIETQCNYFAPLAFPQTIDAGIRVARLGESSVRYEVGLFAQSEAVSAACGHFVHVYVGRDDRR
PRPLPQRLRQVLQPLCI
>gi|319762245|ref|YP_004126182.1| nicotinate phosphoribosyltransferase [Alicycliphilus denitrificans BC]
MIITSLLDTDLYKFTMMQVVLHQFPGAQVEYRFKCRNPGVELAPFASEIRDEIRALCTLQFQDAELAYLR
SMRFIKSDFVDFLGLFRLNEKYIRVSALPTGEIDITITGPWLHTILFEIPVLAIVNEVYFRNTQKVPDFP
EGRRRLDAKIAQLQASGLERLKIADYGTRRRFSRAWHEEVLRVLCARLGTDGRGDGDAGRFAGTSNVLYA
MKLGVTPLGTMAHEYLQACQSLGPRLRDTQVFGFEMWAKEYRGDLGIALSDVYGMNAFLRDFDLYFCKLF
DGARHDSGDPFAWGERLLQHYRDNRVDPLTKTLIFSDALTVPRIIELFQRFHGRCQLAFGIGTNLTNDLG
CEPLQIVVKMTRCNGQPVAKLSDAPGKNMCDDEKYLAYLRQVFDIPTPA
>gi|319762246|ref|YP_004126183.1| transmembrane protein [Alicycliphilus denitrificans BC]
MKVFRMLALAMACMASPLAMAADIDGSRLSVLWGVPFAGILLSIALLPLLAPMFWHHHFGKVAAAWALAF
LVPFAFVYGPGAAAAGFVHALVAEYIPFVILLTALFTVAGGIYIRGNLHGSPALNTGLLAVGAVLASFMG
TTGASMLLIRPLIRANDNRKHVAHVVVFFIFIVSNAGGSLTPLGDPPLFLGFLKGVDFSWTVRHIFPDTL
FLVGVLLALFYAFDSWYYRQAGEVGRSDPTPDSPPQALGFDGKVNFVLLLAVVALVLLSGVWKSPVEWVI
AGTPVGLPGLVRDLGLIVVTLVSLALTPRQVHADNQFGWGPMQEVAKLFAGIFLTIIPVIAMLKAGVDGP
FGAIVSAVTRADGSPDPAMYFWATGVLSSFLDNAPTYLVFFNTAGGDPATLMTTHAATLAAISAGAVFMG
ANTYIGNAPNLMVKAIAEDRGVKMPSFFGYMLWSGAILVPLFVAMTFIFF
>gi|319762247|ref|YP_004126184.1| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MPEPRILVTRRIFPEVIERLSRHFEVESNPDDVLWTQAELAQRMADKDGAFTTGSHRIDKALLAVSPRLK
IVANMAVGYNNFDVEAMTAAGVQATNTPDVLTETTADFGFALLMATARRITESEHYLRAGQWTRWSYDMF
AGGEVHGSTLGILGMGRIGQGIARRGAHGFGMDVIYHNRSRLSPELEAECKARYVGKDELLAQADHLVLV
LPYTPESHHAIGAAEIARMKTTATLINIARGGIVDDAALAEALKDRRIAAAGLDVFEGEPSVHPGLLEVP
NVVLTPHIASATVATRLAMANLAADNLIAFFEKGAPLTPVNRIASR
>gi|319762248|ref|YP_004126185.1| hypothetical protein Alide_1538 [Alicycliphilus denitrificans BC]
MSTELLAVLAAILSIVLALGLGLLWGAARARREAEAGREQALAAARAEAQAEALARIAAAQERVRGLESE
RAGLQAELQQLKAQASAWREALDTARDERAQMAERAARVPALEAQLQEQGQLAQALRQQLAALQAQAAAQ
AAQADAERRAAQEKLALLTEAREALTHQFKSLANDILEEKGRRFAEQNQQSLGQLLDPLRTRLAEFQGKV
EQFYDAEGRQRSALAQQVHQLMGLNQTLSEDAKNLTQALKGSTKAQGNWGELILERVLESAGLRRGFEYD
VQENHLRDDGSRAQPDVVIHLPEDRHLVVDAKVSLLAYEEWATGDDETLRAAAQRRHLDSVRQHIKGLAE
RNYQQLYGLQSLDFVLMFVPIEPAFMLAVSGDGQLYGDAWNRNVLLVSPSTLLFVVRTVAHLWRQEAQTR
NAQEIARRGAELYDHLTAFVEELEKVGKGLAQASDAYHRAFNKLSKSRGNVIRRAEMLKELGIKPAKALP
PALVEAAREGDSEENTAATLAQPALGASEDVAEEGPSGKGAA
>gi|319762249|ref|YP_004126186.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MNWALARLIAGQICIHACMAGMRMAAPLLALRQGYSAAAVGVLLALFALTQVFLALPAGRYADRHGLKRP
VRHAVVAAVLGAGGAFAWPVFPMLCVAALLTGGATGAATIALQRHVGRAAHDATQLKQVFSWLAIGPAVS
NFLGPFCAGLLIDHAGAQAGGTGGFRAAFALMAVLPLATWFWVRTAQELPSVIAAAGGPRQRAWDLMADV
GFRRLLIVNWLLSSCWDVHTFVVPLLGYERGLSASVIGSILGAFAIAAALIRVLMPLVAERLREATVVTW
AMGMTAVLFAVYPLLPTALALGTCSVLLGFALGSVQPMVMSLLHQITPAHRHGEALGLRLMAINGSSVLM
PLLFGSASALIGVSGLFWMVGATVGLGSRVAWRLGDR
>gi|319762250|ref|YP_004126187.1| conserved hypothetical protein chp00730 [Alicycliphilus denitrificans BC]
MQANTDLQDSRLANAWAELHNYAVAGNPLHPDSYRLAFADPEFMLRRETRGIRFQLELLKPDLEQAAQGI
EHTVVVYGSARFVSPEAAAQQLAEAQASGDGERIARAERAVKNAQYYDLARQFARHVADYSLSRPPAERL
YVCTGGGPGIMEAANRGAYEAGAPTIGLNITLPHEQSGNRYITPALSFKFHYFALRKMHFMMRAKALVLF
PGGFGTLDELFEVLTLVQTGKAKPAPIVLFGTAFWKRLINFEALVEQGTVSPEDLKLFHYTDDPAEAWGI
IRAFYEL
>gi|319762251|ref|YP_004126188.1| crcb protein [Alicycliphilus denitrificans BC]
MLHALAIFAGAGVGALARWRLGLWLNTQGSLLPWGTLAANLVGGYLIGLCLALFQALPQLDPAWRMLLIT
GFLGGLTTFSTFSAEVVTLLLEQRLALALGVCAVHVAGSLCLTWAGLRSLPLLLPHLRTII
>gi|319762252|ref|YP_004126189.1| peptidase m14 carboxypeptidase a [Alicycliphilus denitrificans BC]
MTASTVLDLPLERTLHAWVRRFSQPRWHGRHVEGWLFEGRAERLAAEQQLAAVGVHARFHSAYKPLVQHF
IDHVDLEQLAAAHVRYPVPATGPRQRFRLEAYPLAALLGEDALRLEPRGDANPWYDVQLHLRDGQCLEQR
VRAPNRAHADTTGAAALSPCGWLRAGTQAGAADLLDIAVCTDFERAFHHAVQAVREHPWPPGEPYFERLL
LRIDLPGFEQPIAWAGETISTAEALHEDLYFSLLEFFQQHSGRPLGDRRLQPGQIVPDVRTGSAAPRVRV
SLQPFDAAAQDALAARKGLRAAAGQPLESLDRAPAPEHIAQILQSWPGRRFSAPTRQGRTVWGLYHPGTQ
CPVFISGGQHANETSGVVGALRAAEALRQQDGAHFALIALENPDGYALHAELCAWHAGHMHHAARYTALG
DDVEYRETAPLLEREARQAALALSGAQLHVNLHGYPAHEWTRPLSGYVPRGFEQWMCPKGFFLILRHHAG
WQQPARALLEAVCAQLAQVPGLAEFNARQRALYERHAGPLPFEVLHGIACMQTQTAHDAPVTLVTEFPDE
TVCGDAFRFAHTVQMHTALAAAQAWQGIAPR
>gi|319762253|ref|YP_004126190.1| na+/h+ antiporter subunit [Alicycliphilus denitrificans BC]
MTPQALPLWLDIAVSVLVLAGAAIAFLGSLGLLRLKTYFERVHAPAIIATLGCWCIMHATLVYFSAVGDG
LALHALLIALFVAVTVPVTNIFLMRAALFRARRTGENVPPNLSRTTDDHVRDF
>gi|319762254|ref|YP_004126191.1| multiple resistance and ph regulation protein f [Alicycliphilus denitrificans BC]
MTSPILSWALPIALFLLVAAMVLCLARLLRGPAAQDRVLALDCMYLNGMLLMLALGIYYGSANYFEAAML
IALLGFASSTAMAKFLLRGEVIE
>gi|319762255|ref|YP_004126192.1| cation antiporter [Alicycliphilus denitrificans BC]
MMKRLLPAPLVSLGLFVMWLLLNRSMSAGHVLLALVLALGLPLMFHELRPQKVRVRSFGAVVRLCFRVMV
DTTRSNIAVLRFLLLPGTRRHPPDFVKIPLELRDPNGLAVLAMIVCITPGTAWAELSLDRSMLMLHVLEV
DDPQAIVHHVKTCYERPLMEIFE
>gi|319762256|ref|YP_004126193.1| NADH/ubiquinone/plastoquinone (complex i) [Alicycliphilus denitrificans BC]
MSHLSELTAAAMPHLMLAPIALPMFTAAFLLLLREEQQRLKFGLSVLSTLAGLLVASALLQWTHQASAPA
SMGVYLPGNWPAPFGIVLVLDRLSALMLLLTNIVALCSVLFAGARWQRAGVHYHTLFQFQLMGLSGAFLT
ADLFNLFVFFEILLAASYGLLLHGSGRARVQSGLHYIAINLAASSLFLIGASMFYGITGTLNMADLAQGM
AHVSAEDRGLLHAAAAILATAFLIKAAMWPLNFWLVPAYSAATAPVGALFALMTKVGVYTLLRLWTLMFG
TEAGASALFGSLWLIVGGMATMAFGAIGMMGSQRLTHLAGHAAVLSSGTLLAAAGFGQNALTAGLLYYLP
SSTLAVGALFLLADLIDRWRNDGTTLAPYESDDDAPFLSPELVPTAGLNLDDDEQVLVGRVIPASAAFMG
LAYLMCTLVIAGLPPLSGFIGKFAMLTALLNPLGLGSSAGTRPGPVGWTLLALMIGTGLFALMALTRSGI
RHFWASPERSMPQLRVLEGLPIAVLLGACVTLTLQAEGVMRFTTATANALHAPGTYVRAVMSAPPRPAPA
AAVQAGGAVQ
>gi|319762257|ref|YP_004126194.1| NADH-ubiquinone oxidoreductase chain 4l [Alicycliphilus denitrificans BC]
MEIVLAISIGVLTGSGVWLLLRPRTFQVIMGLSLLSYAVNLFIFSMGRLGLAVDKEPVLVPGVPPDLQHY
ADPLPQALVLTAIVIGFAMTALFLVVLLASRGISGTDHVDGTHAREQQEMP
>gi|319762258|ref|YP_004126195.1| NADH/ubiquinone/plastoquinone (complex i) [Alicycliphilus denitrificans BC]
MPLILLVALPFIASLLAAALPANARNTESTLAGLVALACTAQVALCFPDVANGGVLHQEVAWLPSLGMNL
VIRMDGFAWMFSMLVFGIGSLVVLYARYYMSPADPVPRFFSFFLAFMGAMAGVVLSGNIIQLVFFWELTS
LFSFLLIGYWHHREDARRGARMALTVTGTGGLCLLAGMLVVGHIVGSYDMDRVLGAAELVRDHPLYLTAL
VLVLLGAFTKSAQFPFQFWLPNAMAAPTPVSSYLHSATMVKAGVFLLARFWPVMGGTEPWFWLVGGTGLA
TLLIGGYAAMFQDDLKGLLAYSTISHLGLITLLLGLNSPLAAVAAVFHIMNHATFKASLFMAAGIIDHES
GTRDIRRLSGLRRMMPITATLATVASAAMAGVPLLNGFLSKEMFFAETVFIDAAPLVATLLPATATVAGM
FSVAYSLRFIVDVFWGPPATDLPHQPHEPPHWMRVPVELLVCACLVVGILPAWSVGRYLDAAALPVVGGS
LPAFSLAVWHGINAPLVMSFVALVGGAALYLLLRRERDRGRISAPPLMHRISGRHIFEAALTRLTLLGRG
GRRLLSTRRLQWQMLWLVLVALAGAAMPLWTRGMHLGERGTLPLSPTFVLLWALGMVCAVSAAWQAKYHR
LAALTLMGGAGLCTAITFLWFSAPDLALTQLSVEVVTTILILLGLRWLPKRDESLPALQASTALTRARRL
RDLFLSVIAGAGMGWLALAMMSRPFAQSTSTFFLERALSEGGGTNVVNVMLVDFRGFDTFGEIVVLGVVA
ITVYALLRRFRPAGEAMDLPEQQRFLPADLQTDLLNPRHASDTAIGYLMVPAVLVRLLLPFTALVAFYLF
MRGHNEPGGGFVAGLVFSVGLVLQYMISGTTWVEAHLPLLPRRWIAWGLLLALGTGLGALILGYPFLTSH
TAHVSLPLIGEIHVASAMFFDMGVFSLVVGATLLILTAIAHQSVRSHRHHARLLEEQQLAIAAVVSYGDD
GMQEQR
>gi|319762259|ref|YP_004126196.1| hypothetical protein Alide_1549 [Alicycliphilus denitrificans BC]
MANRFLPALCLAALLHAGTALAAVDVNRAREADLDGIKGIGPALSSRILAERAKGRFQDWRDLISRVKGI
GPAAAARLSENGLTVDGASYAPQDARPGAAGTAPSH
>gi|319762260|ref|YP_004126197.1| hypothetical protein Alide_1551 [Alicycliphilus denitrificans BC]
MKYLLWLLKAAIFFTLFAFALNNQQDATVHFFFGTRWTAPAVLIVLSAFTLGVVVGVLGMVPRWWRHRSA
ARRAQAAAQEPSPAAPAQPPAEPTMPQTPIDGI
>gi|319762261|ref|YP_004126198.1| ppic-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans BC]
MKKQLLSGLVAAAMLGTMALPVAAQNIAIVNGKAVPKERAEALKQQVERAGRPVTPEMENQIKEEVVARE
IFMQEAQKRGLEGTADYKTQMELARQTILIRELFVDFQKNNPVTDAEIQAEYDKFVAANAGKEYKASHIL
VAKEDEAKSIIASIKKGAKFEDIAKKQSKDPGSGARGGDLDWANPGSYVPEFTEALVKLEKGKMTQTPVK
SQFGWHVIRLDDVRDAQLPKLDEVKPQIAQQLQQQKLAKFQEDLRAKAKVE
>gi|319762262|ref|YP_004126199.1| bola family protein [Alicycliphilus denitrificans BC]
MTATTPVSVTAEAMAERLRATLAPTRLEVLDESWQHEGHAGANGTGFGTHFRVRIASPLFAGKRKVAQHR
LVYDALQIFIDHGAHAIAIETL
>gi|319762263|ref|YP_004126200.1| intracellular septation protein a [Alicycliphilus denitrificans BC]
MKLLIDFFPIILFFAAFKVWGIYVATGVAIAATVAQIAYIHVRHGKVEPMQWLSLGVIVVFGGATLLAHS
ETFIKWKPTVLYWLMGGTLLVGQLVFRKNFIQSLMGKQIELPAPVWRQLNWAWTTFFAAMGLLNLWVAYR
FDTDTWVNFKLFGGLGLMFAFVIAQALFLSRHMKEGDAAPEDSQP
>gi|319762264|ref|YP_004126201.1| methionine-r-sulfoxide reductase [Alicycliphilus denitrificans BC]
MTYPIQKTDAEWQALLREKGAEPGAFEVTRHAATERPFTGKYEGHWADGSYRCICCGAKLFDSETKFDAG
CGWPSFWRAVPGAIREIEDRSHGMLRTETVCAQCGAHLGHVFPDGPGPTGLRYCMNSASLDFDPPAP
>gi|319762265|ref|YP_004126202.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MKRTIKKIAVSAMLVAAGGAFAQKGETVKIAWLDPLSGLMAAVGTNQLKSFQFISEEFNRKNASGVKFEI
IGIDNKLSPQETTSALRSAMDQGARYVVQGNGSGPALAIMDALEKHNARNPGKEVVYLNYAAVDPDLTNS
KCSYWHFRLDADTSMKMEALTTFMKDHAEIKKVYLINQNYSHGHQVSKYAKENLKRKRPDVQIVGDDLHP
LAQVRDFSPYIAKIKQSGADTVITGNWGSDLALLIKAANDAGLNNVNFYTYYGGVTGSPTAMGAGAAGRV
YMVSYGHLNLPGDIGRIVGEYKKKFNDDMYTGAVYHAFAMLDAGFVKAKSTDPVKVAAVMEGMKFNSFNG
EVEMRKTDHQLQQGLFVTRWEKAGGKYPVDAENTGYTFVPVKYYEPYVASTPTSCQMKRPS
>gi|319762266|ref|YP_004126203.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MNLEFFVISLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHTSFYMLGAYFAYTLSGVIGFWPALVAAPL
LIGALGALFERYALRRVHKFGHVPELLVTFGLSYLVLEVVQLVWGRSTVPYGLPAQLQGPLFTLYGTQFP
KSRSFIMLVAVLMLLSVWLLLTRTRIGLVIQAALKHPHMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG
NTYVTEPAMAASVGSIIFVVVVVGGMGSLAGAFLASLLIGLVQTFAVALDYSLVHAFARLGVQVTEQTFG
YPVLRLTISQVAPILPYLFLVLILIFRPKGLLGTRED
>gi|319762267|ref|YP_004126204.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MRTTSSLSPAAAPDATRYYRFKPLNVGRIVIWSLFAIALIAAPRLFTSGLALTMLSQIGYATIICLSYNI
LLGQGGMLSFGHAVYTGLGSFITVHAINMAGAGQLPIPLWLMPLVGGLAGMFFAVLLGFVTTKKSGTTFA
MITLGIGELVASMALMFPEFFGGEGGITTDRVYGQPFFGITFGPAIQVYYLIAAYCFVCTAAMYAFTGTP
LGRILNAVRDNPERVEFIGYNTQRVRYFAFIIAGFFAGIGGALAAINFEIVTGADSVSVVRSGGYLLFTF
LGGATFFFGPIIGAVLLVLASVLLSELSKAWLLYLGLVFLFMVMYAPGGIASLIMMNLRLARYGKLRGIV
GAYLALGGTALVAVLGAAAMIEMTYHLQLNAALGPRLEFLGATLDARSVASWFGAGFVLATGLGLFELCR
RQFLRQWGEIQEEIEHEIKRGEAA
>gi|319762268|ref|YP_004126205.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MTTDHQAAHALELRDLRKSFGKTEIIRGANLTVRSGERVAIIGPNGAGKSTLFNLISGRFAPTSGQVLLH
GARIDGKAPFEINRMGLSRSFQITNIFPKLSVFENLRCGVLWSLGYRYAFWRFLSKLQDANERAEQLMEM
IKLDKKRDTLAMNLTYAEQRALEIGITIAGGASVILLDEPTAGMSKSETTRFIHLIKEVTEGRTLLTVEH
DMGVVFGLADKIAVVVYGEVIAFDTPENVRANQRVQEAYLGSVIAAQQEGRH
>gi|319762269|ref|YP_004126206.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MLKMENLHAYYGKSHVLHGVTFDVQPGEIVALLGRNGSGRSTAAKAIMGLVDWEGTLEWKGRSLRGRKAY
EIAHLGLGYVPESRDVFPNLTVHQNLLLGQKGSGRGSRWTFDDMYAMFPRLKERRNIEAGVMSGGEQQML
TLCRTLMGDPDLIIIDEPTEGLAPKIVELVAEYLTRLKERGISVLLIEQKLTIAMTISDRALVMGHGSIV
FQGTPDELRANSYVRKEWLEV
>gi|319762270|ref|YP_004126207.1| 3-hydroxyacyl-CoA dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MTAEYQVHGDVAVITLNNPPVNGLGLDTRRGIVDGLERAQADAAVKAIVVTGAGGAFSGGADIKEFGTEK
SLQEPNLHSVISAVENCAKPVVAAIHGVCMGGGLELALGCHYRIAAPGCSVALPEVKLGLLPGAGGTQRL
PRVVGVEAALNMIVSGEPVKSEFIGAVPGQKLFDRMAASPESLPEEALAFARSVAEARPLPLVRNLPCKH
PEGDAYFQFARNMVKGMAKNFPAPAKCVDAVEAATRRKFADGLQYERELFINLMWTPESRALRHLFFAER
AASKIPDVPSDTPKRDIKKVGVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGIATIRKNYEAQVKK
GKLKEDKYQQRMALLSTTLSYDDLKDCDLIIEAVFEELGVKEAVFRQLDQVAKPGAILASNTSTLDVDRI
AAFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIAKKIRKTAVVSGVCDGFIGNRMIERY
SQQAGFLLDEGCTPSQVDKAIERFGFAMGPFRMGDLAGNDIGWAIRKRRYVEKPDMKYSKTADLLCEMGR
FGQKTGAGWYDYAPGKRDAIPSPMVEKMVEEHRKALGIAPRKISDEEIVQRLVYSLVNEGAKILEEGIAS
KAGDIDMVYLTGYGFPIHRGGPMHYASEVGLFNVVQAMKRFARNPLDDARAWEPAPLLARLAAEGKAFA
>gi|319762271|ref|YP_004126208.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MTSAVIVSTARTPLAKSWKGSFNMTHGATLGGHAVQHAVQRAGIDGADVDDVIMGCANPEGATGMNIARQ
IALKAGLPVTTSGMTINRFCSSGLQTIATAAQRIIAGEGEVYVAGGVESISCVQQEMNQHMLMDHSITKP
ELYWSMLQTAEMVAKRYGIGRDAMDEYGAASQQKACAAQAAGKFDDEIAPITVTAGIADKTLGLITRQVT
VSRDEGTREGTTKEGISGIRPALPGGLISAGNASQFSDGAGACVVVSEEYAGRKGLKPLGRFLGFAVAGC
EPDEMGIGPVFAVPKVLKKLGLTVQDIDLWELNEAFAVQVLYCRDKLGIPADRLNVNGGAIALGHPYGVS
GQRLTGHALIEGKRRAARRVCVTMCIGGGMGAAGVFEVL
>gi|319762272|ref|YP_004126209.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC]
MSIKSILKSTVVALAIVTGGSLFAQGTPIDAAAFDALVAQGPVADAATIRSSTWASKIKQAGTLRLGGTQ
TSNLFSLLNEKDGKIRGFDAGLAQLITRYILGDGAKYRFTQVTSSTREQVLINDQVDMVFATYSITPARA
EKISFAGPYYTSQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPAILAQYASKAVVQEFQTHQEALDAL
RQGRVDAYVTDYTLLLNALSLGTGDARLAGAPFGAQDPYGVGLPKGSDGVAFINALLKKLEADGTWAKLW
TISIGQRTGSTAVPTPPTLP
>gi|319762273|ref|YP_004126210.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MGDVSRLLADYGPAFGQALLLTWKLTVVSFVPGFLLGMVVTVLRLLPLPPLRFVLTGYVEIFRNIPSVAL
LIFIVFALPDLNVVIDYEPSVILTLALVCSAFTADYLRSGINTIPGSQIEAALSLGLRPMRIISAVVLPQ
ALRAVVQPMTSLLIALMLSTSLASQVPFPGRELTALVSKIATDSAAGIPAFAVAAAMYVATGLLIAWAGA
ALEKKVRILR
>gi|319762274|ref|YP_004126211.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MSRPLEDILFGAPSPRAQTAIRVASVTAAAVLLLLAAGIVFRFHAAGQLDARFWEFFAWPTTWAFLGRGL
LGTLASAAMAAVIALAFGLVLMMGRLARLRLVRWPSIAVIEFLRGTPTLLLIYVCFLVLPSVGIKLSTYW
MLTLPIGLATAAVVAEVYRAGVLAVPRGQTDAARSLGLTEAQVFFLVVFPQALRYIVPALVAQLVIVVKD
TTFGYVVTYGELMQNAKVLIANYHALVPVYLVVAALYCLVNYAISRASKRLGGPMH
>gi|319762275|ref|YP_004126212.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MSPQGMPPIISSMTTSLRSTLDFLLYDWLRAASLTARPRFADHSRETFDAVLDTCERIAREKYAPFNRTV
DTQEPRFDGEKVILPQCTHDARQAYADSGMLGAAQDYELGGMQLPYVVESAANSFFACASISIGSNLLTT
GNANAILVHGTPMQQRVFAANEFNGRWAGTMCLSEPQAGSSLSDIATRAEPDGAGFEADPLGPRYRLRGN
KMWISAGDHELTENIVHLVLAKIPGPDGKPVPGVKGISLFIVPKKLVDTEGKLTGERNDVALAGLNHKLG
WRGTTNTLLNFGEGRYPVRAGQGGGLDGRGAGAIGYLVGKPGEGLKCIFHMMNEARISIGMAATMLGLAG
YYASLDYARTRLQGRPIGSGGKDASSPQVRLIEHADVKRMLLAQKSYGEGALALNLYCARLVDEGRTGDA
GAAADARLLLEVLTPIAKSWPSEFCLEANSLAIQIHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQAAD
LLGRKVVMQGGAGLQLLARTVAATIAKARQRPGLAAWAGQLEQALRDVIDATRAAWATGNAGEALANAVP
YMQAFGHVVLAWMWLDVADSVLAKDASLSIAASAGRMGAARYFFHYELPKTGAWLAVVCTRDATCADMAE
DAF
>gi|319762276|ref|YP_004126213.1| flavodoxin/nitric oxide synthase [Alicycliphilus denitrificans BC]
MSTAPKTLLIVYHSLTGGTRQMAEAAQAGAAAEPAVAVRLLHAAQAGPDDVLAAQGYLFATPENLAAMSG
QLKDFFDRCYYPVLDRINGRPYASLICAGSDGQNAARQIARIATGWRLKEVAEPLIVCTHAQTPEAILAP
KQIGADELERCHALGEALAAGLALGVF
>gi|319762277|ref|YP_004126214.1| hypothetical protein Alide_1570 [Alicycliphilus denitrificans BC]
MSFRTSSWASWGAMPMFVLLWGSAAIFTRWALDHGSPSAVLLVRYGAALLAVAPWRRGRWWPAAGTRGTV
ALAGLLMVALYSVCYFQAMAHGITPGLIATLLGVQPILTLALVKRRFGAARLGGLLLALVGLAMVVWQSL
VATRFAAAGLAFALGALACITAGAIVQKRVRQEPLQVLPLQYAVTLAVCLAFAQVQPLRLDGSAGFWLPA
LFLGLGISVLAQWLLYRLIQRGNLVNVTSLFYLVPAVTALLDYAVLGNLLAPMAVAGMLCILAGVILVHR
RA
>gi|319762278|ref|YP_004126215.1| hypothetical protein Alide_1571 [Alicycliphilus denitrificans BC]
MTDDQYKTIMQALARLAKESAQVRQLILDAIADIGDLQARIEAVNMRFDE
>gi|319762279|ref|YP_004126216.1| hypothetical protein Alide_1572 [Alicycliphilus denitrificans BC]
MARKSAAALATPTIFTAKRPPPPDGLPPGAAALWVSICAGLDANYFSTGDMVLLEALVMADHQKRLCDAL
VLRDGPITGDGAINPAAKLSAQLAGTLAALSGKLRLCKSATTRPESAGLKKALHSGLKPWETSPEMAEYF
ND
>gi|319762280|ref|YP_004126217.1| hypothetical protein Alide_1573 [Alicycliphilus denitrificans BC]
MTCRTCKHRLDVTLWGCWLATGCRIGLVLRTACDEWAPPGGAEKSVPP
>gi|319762281|ref|YP_004126218.1| vrr-nuc domain-containing protein [Alicycliphilus denitrificans BC]
MSAAPYRGAPIRTCPAPAADTDLLGDEIQTPRTNSRPEAAALVEVLKALRAHPAVAWAERMNTGAAKVGN
RFIRFGWPGCPDVLGQLKDGRFLGVEVKAQAGRLRPEQALFLARIRAAGGVAFVARDCRDVLRELRTP
>gi|319762282|ref|YP_004126219.1| primase 2 [Alicycliphilus denitrificans BC]
MHDTAKAIDALHSIPPDIDRESWVRVAMAANAAGVGFDDFDAWSAGAGNYNAAASRDVWRSIKPGKGVGA
GTLFRMAAENGWRMSEGKPQQRAVQAPRKAAEPLRKPAPGMSPAEVWERCEPATAAHGYIAAKAAAGVPL
DGLRVVPAGDGLRIAGQNMAGALVVPALAADGALQSLQLIPPPGGGKKLNLPGAAMAGASFTVGEVVPGA
PVALCEGVGTAWACWQATGHPAVACFGWGNVGKVAEALRQREPAARLVLVPDVGKEESAAEIAQALQCAV
AYMPQGEVQNFDANDLAQRDGHDVLAALLEDAREPAPPGLPLSVAFADELPEAFTPPDELVEGVLTAGDG
SVLYGDSNSGKTFFVIDMAAAVARGARWMGRNTEPGLVVYLAAESPASVRGRLQAYQRHHGVRVPNFAIV
QSPIDLFDGDADTEAVIAVVRQLERQRGQKVRLIVGDTLARLSAGANENAGQDMGLVVRRFDRIRTACNA
HFLLIHHSGKAAANGARGWSGIRAAVDTEIEVTDSPTGRCAEITKQRDLSTKGERIGFRLDTVTLGTTKW
GAAATSCVVVPADAPDKPQGKRVSEVGGAVLEYLRTQPAGKKKREVVEHFQPLYDKSAVYRELKKLVTAG
QVLECIGIVTAASEVRNGAN
>gi|319762283|ref|YP_004126220.1| hypothetical protein Alide_1576 [Alicycliphilus denitrificans BC]
MKAIEIVCSSFEWWGDRWNSAMPYSIDACTIPDGHQLPNAPVSVYVLTPDPLEAAQLLRLLAAKLEREPQ
LLKPLNEPGNSPNNPAEADDGGCPF
>gi|319762284|ref|YP_004126221.1| hypothetical protein Alide_1577 [Alicycliphilus denitrificans BC]
MNAAPKKKPQTVAADKGLSKEHTPKFTGTDNPRHLRAIAALLRRPMPRENLDTEAGCSNGPELVAELRRR
GLEVPCHRINFVDRDGFICRPGVYLLTDTDRRKLHQWMAKRQQKGGA
>gi|319762285|ref|YP_004126222.1| hypothetical protein Alide_1578 [Alicycliphilus denitrificans BC]
MKTTATEYSADTRRAVSEPQQFPPLELESRPRVPTEQAAHYLNRRPQTLRAWACLENGPLRPHRVMGRLA
WSVAEIRTVLGVA
>gi|319762286|ref|YP_004126223.1| hypothetical protein Alide_1579 [Alicycliphilus denitrificans BC]
MQEISYQYPMFERLQPRSEWRGGRLADTDVLTLEEAAAFASKHAGEEITARDFLRAAGRGEITLRAIVHR
AAKVRKHDGGVYCNKGEPNENIVPKGCIANLPLTACQHLANAGRASWRTFDGFEERNGILMRYTKGMLTD
DEPDFETVPDDCRVVGYDVHALADEYCAPEDAPQAATPAPLTDRPSNAPAWTVNKPQRYSGYAAPLHRLL
AAAHRDGNPCPTARDVVETWRHNAPAEIAKVLPDGFDYYDAKGDTKTAGLEAIRKAIGRMTSAR
>gi|319762287|ref|YP_004126224.1| integrase family protein [Alicycliphilus denitrificans BC]
MAKIAFTAGRVSGFKCPPDKKQAFMWDATAPGLGLRATPAGKPAYVFQSVYQGKDLRITIGSPAAWSIPD
AQAKARELQRLIDEGKDPRDLKRDALAAQAEKQAAAAAKVEADKAAALTVGEVWGDYIEKRRPFWGELHY
RDHIDKAKAGGLPSGRRGGGKQLTKPGPLAALMPLALKDLDQTTIERWAADEGKTRPSSARLAWRLLTVF
LTWCAEQPEYAALLPDKNPAKTKKAREALGKPGTKSDVLQREQLAAWFAAVRQIQNPVIAACLQMMLLTG
ARPGEVLALRWEDVNTQWKGISIRDKVEGTREIPATPYMLHLLAALPRRNEWVFSSPTSASGCLTEPNNP
HTRACAAAGLEGLTLHGLRRSFASLTEWLEVPAGVVAQIQGHKPSATAEKHYKVRPLELLRVHHERIEAW
ILEQAGIVFDAKAAPGALRVVQAA
>gi|319762288|ref|YP_004126225.1| type i secretion outer membrane protein, tolc family [Alicycliphilus denitrificans BC]
MLTPRRLLCLSLAVCAALAAAAGPAQAQSLSALVELARGYDAPWQAAQAQLQAAASRAEQARAGLLPSAG
LSGGVTYARNDVTRPPLPGVGVNGPTQTLGVQASQPLYRPASRIGFEQGQRGIDLASAQRDAAEQDLLVR
VSQAYFDVLGAQDTLAFVRAQKAAVAEQLASAKRNFEVGTATVTDEREAQARHDLVSAQEIAAENDLHVK
RLALDQIVGRPGTSPLPLAQPVQLPGVRPADVDHWVRTAEDRQPQVRQAALALDVARLETRKAETGHLPT
VDLQASYGVQRTPNGTVLMPGIHSRTNVASVGVALNLPLFAGFAVQNRVKETLSLEDKARADLDNARRTA
AQAARAAFFNVQSGLSQVGALQAAEASSQSALDANLLGYKVGVRINIDVLNAQSQLYQTKRDLATARYNV
LVGTLRLKQAAGTLTADDVAAVDTLLAR
>gi|319762289|ref|YP_004126226.1| rhodanese domain protein [Alicycliphilus denitrificans BC]
MIDHIRPAQLADWIAAHAGDRPLVLDVREPWELQTASVTPRGFELAAIPMGELATRLSELDPARPVACLC
HHGVRSLHVAGFLAHQGFDRVANITGGIDAWSHECDPAVPRY
>gi|319762290|ref|YP_004126227.1| protein-l-isoaspartate(d-aspartate) o-methyltransferase [Alicycliphilus denitrificans BC]
MNMPLNTSADIHDPVEQARYNMVEQQIRPWNVLDAGVLELLSVVRREDFVPPAYQGAAFTDTRIPLNPDA
QEAERLGQVMLEPRVDARMLHDLQVQPTDRVLEIGAGSGYMAALLAARAERVVSLEIDPDLAEFARENLR
GAGVENAQVRQADGALDPIPDGPFDVIVLSGSVAEVPQKLLALLRDGGRLGAYVGHQPMMRATFVRRSGE
RFETSQPWDVVVPRLRNFPEPSPFKF
>gi|319762291|ref|YP_004126228.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MNALPSLPDQPEAPRRGRRKEARPGELLEAALDLFVEKGFAATRVEEVAARAGVSKGTLFLYFPSKEELF
KAVVRKNIAGRFAEWDLELEAYEGTSSELVQYCFQTWWERVGSTKAAGLGKLMLSEANNFPELADFYRRE
VIEPGHRLIRRILQRGMDRGELRPLDLDHAVYCVLAPLMFLTISQPSPSLCILDPECFSPEKYIRLQADN
VLQGLCVRPT
>gi|319762292|ref|YP_004126229.1| peptide methionine sulfoxide reductase [Alicycliphilus denitrificans BC]
MSSQLQTITLGGGCFWCTEAVFDRVRGVTDVQSGYANGHVAAPTYEQVCSGDTGHAEVVRVTFDPAEIGV
REILEIFFAIHDPTTPDRQGNDVGTQYRSGIYYTDPAHRQVAEDLLRELEQGGQWGAPVVTQLQELKSYW
PAEDYHQDYFANHPDQGYCAFVVGPKVAKFRKTFARHLKPGA
>gi|319762293|ref|YP_004126230.1| hypothetical protein Alide_1586 [Alicycliphilus denitrificans BC]
MLRPPHPHALPLLRRRLALAWLLLALVLAPTLGRMHQVLHLPGGAAPQAHAHGAERQAFDALHALFAGHG
NADCQVLDQQTLVGAALGHAPALLQAQPQLPPACAPAPAPGTGGAAPFHARAPPPRA
>gi|319762294|ref|YP_004126231.1| tonb-dependent receptor [Alicycliphilus denitrificans BC]
MNSFASSPRAPGARHPLAWAVLLSLAGAAPAWAQAEASLPEVTVSSSGLQLGASEMTQPVSVLEGDELVR
RREATLGETLEGEPGITGSHFGAGASRPVIRGMDGARVRVLSDGSQLQDASTVSPDHAVAAEPLLATQVE
VLRGPSALAYGAGAVGGVVNVLDGKVPTAIPQKGYEGSAELRAGSAARETAGAVALTGGAGNVAVHVEAA
GRDAGDYRVGSGWAGGSRVPGSFNRTDTGSVGLSWVGSRGYLGMALTRQNAKYGLPGHDHGFEGCHTHGD
HLHCGSHDGHDHDDHDHGDVPVVDLRSERMDVRGELRDPFAGFAALRLRAGVTDYRHDEVEDGAVSTAFR
NKAHDLRVELQHAPVAGLRGMFGVQTAQRRFSAVGEEAYVLPTLTRQWGVFVLEEYRIGNLRLEGALRHD
RQTAELEDGTDRRRHGGTSASLGAVWRFAPGYAAGISLTRASRAPTAEELYARGLHMATSTYERGDAGLR
AESSRNIDLSLRKTSGDTTFDVTVFRNRIRDYIYGRTLDEHDGLQLLQYAQADATFTGIEGRVRQRITPR
LGVTLFGDSVRARLDGGGLLPRIAPMRAGLRLDANWQAWEGQVEWVQVARQDRVAQFETATPGYGMLNMG
VAYNGRTGGGMPWQLYLKARNLTGRLAYAHTSFIKDAAPLAGRNVTLGVRVSF
>gi|319762295|ref|YP_004126232.1| hypothetical protein Alide_1588 [Alicycliphilus denitrificans BC]
MEFTKQFLRAKNPCANGFRWFVRHVEDGVGYQQALDQLVAAGRVDDALWLLGQFGPTNAVLRADGLEAEA
VVFAGTVQVRGGIDVDGVIHAGRSIHAGGGIRAGGAIVAGEDIRAGASIRGQGRLHCGGDLRADWGVEVQ
ESLHCGGELRAAWDVVCGGALEVGAGAFVGQDLTVHGDMACGKGLRVGGHLSGAGSLRAGQGIVVGGAIG
GVMHLEAGWGIKAGESIRANGAIKAGESLCAREDIRAGDGYGIFAGLNVQEPAWEDCAQVWAQRLPAGLR
SGVWMGPSAI
>gi|319762296|ref|YP_004126233.1| chromate transporter, chromate ion transporter (chr) family [Alicycliphilus denitrificans BC]
MPPPPSNPETRHASAWAVFAIFLRLGLTSFGGPVAHLGYFRQEFVARRRWLPEDAYADLVALCQFLPGPA
SSQVGMALGLRRAGWGGALAAWLGFTLPSALAMALLGLGLVAGQGLVPAGVLHGLKVAAVAVVAQAVWGM
ARGLCRGPARLLLMALACALALLWPGVAGQVGAMLLAALAGLALWGRGGAAPVPPVHDEPVGVRARTGAL
LLAAFAALLVLLPLAARAWPQPALLLADAFYRAGALVFGGGHVVLPLLQAEVVATGWVAADEFLAGYGLA
QAVPGPLFSFAAFLGAAARNGAGGWPGALVCLAAIFLPAFLLVAGALPFWERLRHDVRARAAMSGVNAAV
VGLLLAALYRPVWTSAIHAPADLALALAALAALAWGRVPPWLVVPLCGAAGPWLLR
>gi|319762297|ref|YP_004126234.1| auxin efflux carrier [Alicycliphilus denitrificans BC]
MLSSILVPLVPVILCIGTGYLIARVGWVRAAAVPDLSNIVFLLLTPALLFRTMGQVHLQELDFRPVGLYF
ASAALLFGATLAWAPFTTATAARALAHTFSNTVMIGVPLISLVYGPAGLVALFTLVSLHSLVLLTAATLV
FELAQARAGADDGHSMARTVWQAVRGSIVHPVPLPILAGLLFAQTGLPLPEVVDKPLQMLGAALGPMALL
LVGIALAHTRIGAHWRGALRIAAIKNLVMPSTLAALAWALGLSGPAVAVMFTASALPVGANVLYFTQRYG
VMQEEVSSAIAISTALALATVPLALAAARLFM
>gi|319762298|ref|YP_004126235.1| pyridoxamine 5'-phosphate oxidase [Alicycliphilus denitrificans BC]
MSHSPLSSSIADLRKSYERAELSEDASHADPLQQFDQWLQEAVAAQVPEPNAMTVATVGSDLRPSTRVVL
IKGYDARGIVWYTNYDSRKGRQLAGNPYAALQFHWVELERVVRIEGIVEKVSDEESDAYFHSRPLDSRIG
AWASPQSQVIASRGVLVANAARYGAQFLLKPPAPAALGRLPPQARAVGVLAGPQEPAARPAALPAGRRRL
GARAPGPLIT
>gi|319762299|ref|YP_004126236.1| chac family protein [Alicycliphilus denitrificans BC]
MPALAAPLRDPAPMLERTLEEWGGACDLWIFGYGSLIWRPDFPFAERRAAKVHGWHRALKMWSRVNRGTP
ECPGLVFGMLSGGSCRGMVFRVEQAHARQVMVNLWQREMVLGVYDPRWLDCRTPAGPVRALAFTLSRKSP
SHTGVLADEEYRRIFAQASGIYGTTRDYAEATHAELLRLGIHDRALARLLALSRPHA
>gi|319762300|ref|YP_004126237.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
MSFSSSDDDSQQRFALGFLFALIALVVSTVVGVVVYKRGIAHAPAKAPAAAVVTTAVEVVAEDAASVVVE
GGVVKFFFASGKADLAAGASEALAEAVKGVLEGGKTAVVSGFHDATGDAAVNAELSKQRALAVRDALKAL
GVPEEKVELKKPEVTQGSGSNAEARRVEVMLAP
>gi|319762301|ref|YP_004126238.1| hypothetical protein Alide_1594 [Alicycliphilus denitrificans BC]
MQDDLFGGPPPPSAPAAPDKAPARRTGVHPATWGGDLHALAARLPPRLRLGTSSWSYPGWQGLVWESAHS
EQTLAKKGLPVYARHPLLRTVSIDRSFYRPLTASDYARYAAQVPGDFRFVVKAPSLVADALVRSEDGRAR
EPNPAFLNPQLAAQEFVAPALEGLGARTGALVFQLSPLPWRLLDRLPEVLERLRTLLQAQPPLGQPDAVL
AVEVRDPEWLAPEHMGHFADVLRSSGATYCLGLHARLPPLAEQLPLLRLLWPGPLVCRWNLHPVHGPHGY
EDAQKLYAPYDRIHHPDPDTHALLARTLAGVCGRGQNAYVTISNHAEGCAPLTVRRLAEQVAALGAAQ
>gi|319762302|ref|YP_004126239.1| hypothetical protein Alide_1595 [Alicycliphilus denitrificans BC]
MSAQPFPIRTECPPGSCVCERDALMRAPGGDVRILRLTRDEEKRLVQRLENLTSLADLRHMEQRLFEQLG
VRLSITASPHEVRTLRGIAILVHAQPGLCRKTRKAIPEAIRKSMERRPEIAYGLLDEGGLFEGM
>gi|319762303|ref|YP_004126240.1| tex-like protein [Alicycliphilus denitrificans BC]
MQQIVRQLAAEIKITETQVLAAVELLDGGATVPFIARYRKEATGGLDDVQLRELEARLSYLRELQERRVA
VLKAIDEQGKLTAQLRAQIAAVPTKQELEDIYLPFKQKRRTKGQIAREFGIEPLADKLLADPTLDPHEEA
KAFCQPATTLDDGKPGPDFSTAFAVLDGVRDILSERWAEDAQLVQSLREWLWAEGLLRSKKVDGKNENDP
EVAKFRDYFDYDEPIGRVPSHRALAVFRGRALEILEARLVQPQEPEPGQPSLAEGRIALHLGWSHQGRKC
DDLLRKCVAWTWRVKLSLSTERDLFSRLREEAEKVAIKVFADNLRDLLLAAPAGPKAVMGLDPGIRTGVK
VAVVDATGKLVETATVYPHEPRRDWDGSLAVLGRLCMKHGVQLIAIGNGTASRETDKLAAELIKLMQKQA
PAQAGQAPIAIEKVVVSEAGASVYSASEYASQEMPDVDVSLRGAASIARRLQDPLAELVKIDPKSIGVGQ
YQHDVNQGELARTLGAVVEDCVNSVGVDLNTASVPLLSRVSGLSGSVAKAVVRWREQHGAFRNRKQLMEV
GGLGAKTFEQAAGFLRIRGGDNPLDMTGVHPETYPVVEQIIVKTGRPVQELMGRAEVLKALKPEQFASER
FGAITVRDILGELEKPGRDPRPDFKVARFNEGVEEITDLKEGMVLEGTVSNVAQFGAFVDLGVHQDGLVH
VSQLAHKFVSDAREVVKTGDIVKVKVLEVDVARGRISLSMKLDAAPARQGHERGPRENRFEGAGRGYAQP
QRRGNDPAPQSAMASAFAKLQGRR
>gi|319762304|ref|YP_004126241.1| hypothetical protein Alide_1597 [Alicycliphilus denitrificans BC]
MIPLTRRRLLQAIAAAGTMPALHAGAQATYPGKPIRLIVPAAAGGATDIIGRLVAHQASLALPQPMVVEN
VAGGGGVIGTQVVARASGDGHTLLMGAINHTINASLVGKLPYDSVKDFTFISHLVSIPNVLVVHPSLPVT
TLAEFIQYARTHDTLVFASSGNGTSQHLSAEMFRMATGVKYQHVPYKGAAPATNDLLGGHVHLMFDNLPA
AAPNIRAGKLRALAVTSARRNAAFPDLPAIAETVPGFDVRSWFGLMGPAGMPRPVVDKLHAEMVRIFTQP
EVLRRIADMGAEAQVTDPAAFNAYVHQEMERWAKVVKASGATVQ
>gi|319762305|ref|YP_004126242.1| hypothetical protein Alide_1598 [Alicycliphilus denitrificans BC]
MNNAHTLAGDPYVAAFPENLPFWEAAARGRLLLPRCADCGQAHWHPRAHCPYCRSEAVRWEEASGRGTIH
ACTVIRRPDSHCVLAYVQVEEGPLMMTNIIDAAPEDLHIGMAVRCDFRATAEGRHAPVFRPA
>gi|319762306|ref|YP_004126243.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MNAMNFHHPAFIVGAFEHPTRHAPDKSVAQLHAECARGALADAGLGMDDVDGYFCAADAPGGIPALMADY
LNLRLRHIDGTESGGCSYIAHVGHAATAIAQGRCSVALITLAGKPRSSGQATGTEIRKIPPERPAAPFEQ
PYAWTVAGLYGILASRHMYEYGTTMEQLAWVKVAASHHAQHNPHALLRKVFTTDDVLASPLVADPLRRLD
CCVITDGGGALVMVHPSIARSLKRPMVGVRGFAETIRTNEAGRLDLLQTGAAVTGPRAFENARLTPADVK
YASVYDNFTIMVAMQLEDLGFCAKGDGGRFVADGNLISGVGRLPWNTDGGGLCNNHPQNRGGITKVIEAV
RQLRGEAHPAVQVPNCDIALASGPGLVMGAGHAHATVLLERLQ
>gi|319762307|ref|YP_004126244.1| hypothetical protein Alide_1600 [Alicycliphilus denitrificans BC]
MQWISLAAAVGLCVAQGAASAQAWPAKPVKMIIPLAAGGATDKAARLVAQRLSVALGQQVVAENVTGASG
SIALQRLAQAEPDGYTLGATANSLHTIAPHMGKLPYDAFSAFSFVGTYAAFDYVLITAPDAPYKNVAELV
ERARKNPGTVSYGSSGVGTGNHLAAALFGQLAQADLNGIPYRGGSPAILDVMAGRTDFMFDVVGGAIAQI
EGGKVKALGVSGVKRHALLPGVPPIADSVPGYESGGWFALIGPARLPPAIVHRLNTELNRIQASAEFREQ
LAALGYEPLPGTPADVEKRLKAETLKWGEVIGKLPCTAVPERCATTQ
>gi|319762308|ref|YP_004126245.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MTERLKGKTALVLGAGCVGEGWGNGNATAVTFAREGANVVCADINEGSAAQTAELVRREGGKAVHVRADV
ASLEQLEHAAAVALEAYGRIDVLHNNAGISVRGGTLDSSEESWDRVYAVNARGAFLACKAVIPHMQRQGG
GSIIHVSSIAAVGWTGHALLSYQSSKAALNQLTRMVAVQHAAEGIRCNCIMPGLIDSPRIYQTILPVFGG
DVERMRASRSQAVPMKRMGEAWDIANAALFFAADESKYVTGVVMAVDGGITCSLPH
>gi|319762309|ref|YP_004126246.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MQLIDLFDRGATYGAESPCLIEPGGSTWSYAQVQDLSHRIANGLQTCGVERGSKVGLLSANHVLTFAAIL
GIVRSNGIWLPVNARNAPEENVNILVRGGCEFLFVHSQFAAQLPQLREAMPALKGIVCIDAELPGVPGLQ
TWAGEQPAQPFRSEDRTDDVVAIRGTGGTTGLPKGVLISHRNYLAMYANWYAAMPVRERPVHLVVAPLTH
AAGSLCFATCGYGGANIILPSAEPAAIIEAIERYKVTQLFLPPTVIYKLLAHPDVRRGDYRSLRYFVYSA
APMSVDKLREALQVFGPVMVQAYGQAEAPFACTIMTADEHAHILGDPALGHRLSSCGRASPFVRVGVMDA
EGRLLPPGERGEIVVQGDLVMKGYYQDPEKTAETLRHGWLHTGDVGYRDEDGYFYIVDRMKDLIVSGGFN
ISPSEVEQVLWAHPAVSECAVIGVPDSHWGESVKAIVELKPGVPWDENAALAYCRDRLGGMKAPKSIEVW
PQLPRSTVGKVLKREIRERYWAGQSRRV
>gi|319762310|ref|YP_004126247.1| hypothetical protein Alide_1603 [Alicycliphilus denitrificans BC]
MEPANLLPSRRRAVLQALAALALPAGLTVRAAQWPERSITFVQPYAPGTATDASSRYIAQQISERWKVPT
VMEHKVGANSIIGTEYVARAAPDGYTFLITSTGFFTNEAMVSKLPYHPLDSFVPVAKVGGVQLLLCVPAN
SRLRSAKELVDFARANPGRLTYASGGNGSSQHLSGAQLGTLSNTQLMHVPYKAQVPAAVATASGEVDFSF
IAIATAKPLLAADKIRVLAVSGSSRSASFPEMPTVAEAGVPGFEWVANTFFLAPANTPRDIVRKLSGVLG
EVAGSDGYREFTKGIGMDADFMGEAEWSRTIAAERQRYLQVVRASGAKAE
>gi|319762311|ref|YP_004126248.1| regulatory protein laci [Alicycliphilus denitrificans BC]
MTERVSIRDVAAAAEVSIGTVSRVLNGSGYASQAVRQRVQQAIARLGYEPDFTARHLRTGHSRTIGYLLP
NIANPFLAIHLAEVEKLAQGAGYSLFIGSSERPARDKELVAFFENRRLEGIIASPSHEYEDPKSSPFGTT
SLPTVIVDRDLGPGFDSVLVDHCQGMRKVMEYLLALGHRRVALFASGPRLRPGREKLRGYRAALEDAGFA
FDERLVHLSESWLESSREPMRRMLRLEAPPTAIIAVGTQLLSGAVHVVREAGMDIPRDMSVVGIGTLETL
ELMYPPVTALRYNFHQSASAAVQLILQRIEKVAPPHARTVVIQSDLILGASCGAV
>gi|319762312|ref|YP_004126249.1| citrate synthase [Alicycliphilus denitrificans BC]
MSTTPKDTEQVRQAVRDWWRTSIIDMAPGSIRYSGYPIQELIGRVGFAQMIWLMTRGELPSEGEARLLDA
ALVAAVDHGPQAPSIAIARMAATCGVGLNNAMASAVNVLGDVHGGAGEQAVEMYACIARRLDRGEDLRAA
ASAGLDEAIDRHGKFVSGFGHRFHPIDPRAPRLLELVDEAARAGVVGGRFARIGRAVEEELAARKNGKRI
PMNIDGATAVIYAELGFPAALARGLFCLSRSVGILAHAWEQTRQGGRNKGPIPREYIWSYDGPAQRAVPG
SQT
>gi|319762313|ref|YP_004126250.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MPIKPLQGVRVLDLTNVLAGPFCCHQLAHMGADVIKVEARLGGDLARQLGADVELNRRNMGVSFLAQNPG
KRSITLDLKKESAKAVFRRLVRTADVVVENFRPGVMDRLGLGYAELLQENPGLVYCAISGFGQTGPLRDF
PAYDQIIQGMSGVMGITGDQESAPLRVGYPIADTIGGITAAFAVASALASPKRNKGVFIDVSMLEATMAT
MGWAVSNHLVAGRAPQPMGNDNVTASPSGTFRTGDGLLNIAANKQEQFEKVCDVLGRPEWKQDPRFAERH
ARLGNRAELKRLMETELAARSADAWWQLLNAAGVPSGPVYSVPQALDHPQISTRGMVATFKDAPGVGRDI
RLVRTGFKLNGEAPSVDAPPPRLGEHTDAILAELGYAEEEIASFKQQEIV
>gi|319762314|ref|YP_004126251.1| hypothetical protein Alide_1607 [Alicycliphilus denitrificans BC]
MPIDNMRRHMLLAGAASMLGTPAFAQGKPITIIVPYSPGGTADLSTRVIAQFAAPSVGSPMVVDNRTGGG
GLIGWGLASRAAPDGNTLLTVELAYAIAAGLLPNMPFDPLKAFSQITTAVKVPHVLVVNPNVPAKTVQEF
IALAKAQPGKLNYGSGGNGTNTHLAGELFKSVTGTDIVHVPYKGAGAVLADLMGNQVQALITAVPTALSH
IRSGKLRALMVTGAQRNALLPDVPSAKEAGIPAMDIDYWVGLGAPAGTPQPVIDKLGKAINAALAQPEAR
KKFAEMGLTVVGSTPEQATQFVHSEIQRWSAVIKQAGIKPE
>gi|319762315|ref|YP_004126252.1| extra-cytoplasmic solute receptor [Alicycliphilus denitrificans BC]
MVDTPRRLLLAAICALPLASMAQGGYPSQPIKLIVPFPPAGGTDVLTRLVANEVALKEKWTFVVDNKPGA
GGNIGLDAVAKARKDGYTLGTGQTANLAINPTLYTKMPFDAGKDFAPVVLLASQPVVLVVRPDSPIKTLA
DVKTQAKQLTMASAGTGTVGHVGGEMFAKRAGIKVMHVPYKGAGPATTDLLGGVTDMYFATPPSVISLIK
SGKLRAVAVTSPKRLSVLPDVPTVAESGYPGFEAEDWKAMVAPAGTPPEAIAQINKAVNAALARPEIAER
LRDEGSVARGGTPAELGAFLKSEQARWGTAVRESGAKLD
>gi|319762316|ref|YP_004126253.1| amidohydrolase 2 [Alicycliphilus denitrificans BC]
MSSNYLAVRPDWLALGQEEILEPDLPIVDVHHHFFDRPGWTYLASEYLADVRSGHKIHSTVYMQAQTRYR
REGPANLRAAGETEYVAHAADSLAATGVNVAAGIVGHADLRAGARVREVLQAHIEAGRGRFRGIRHLTTW
DADASLVNPLSAVPARLMLDGAYREGVAQLAPLGLSYDAWLFFHQLPELQDLAEAFPDTTVVVNHCGGIV
RIGPYAQCRDEVFRQWARAMRELARLPNVYVKLGGLGMRINGFDFEKSETPPSSQQLAAAWRPWMETCIE
AFGAERCMFESNFPVDKGSYSYATLWNAFKRLTSGASAQERRALFEGTATRVYRIA
>gi|319762317|ref|YP_004126254.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MPKKSATTSLADEQAAPGGAAAVDKAVTVLAAFRAGDRALSVTELAERTRLYKSTVLRLLASLAHGRLVQ
RTADGQWSLGPEVARLASIYSASFSLEDLVMPEMRALMERTQESVAFHVRQGDQRLVLYRVDSPQLLRDH
VRAGDLLPLDRGAGGRVLMAFAGAKGRMYDKVRRDGFVMVSGDRVPGLVGISAPVWNAARELVGALTLTA
PEQRVRPSFADELRRSAQALTGLLGG
>gi|319762318|ref|YP_004126255.1| metal-dependent hydrolase hdod [Alicycliphilus denitrificans BC]
MQSMELNALLEQPFVLPSLPRAVALLMNELGSAEPSLRRLNQLFGTDPALAARLLQEANSAPFAAQRQVS
GIPEALALLGVDRLRTLVAAAPPGTTSRSVPGVNLQHFWRYSLYTAKLARALAGLVHHNQIAAYTAGLLH
GVGELALHMADAARMQSVNALVGPLDLRRAKLEQHLLGYCYAQVSAGLAWRWQLPDVVVDALRHHPAPFD
NDVCEPLAGVLHLAAWRARAREAGLGARELAVTFPGEVGVALGLDIDMVLQQDPIDWKARSDAGDYV
>gi|319762319|ref|YP_004126256.1| fumarylacetoacetate (faa) hydrolase [Alicycliphilus denitrificans BC]
MTMKQSFTALGAGLALALAMGAQAQCLSDGEVGVLASHYSAKTPAPNFPALSDADGACTRAKFNVLLASS
LGKVVGYKAGLTNPAVQKRFRTDKPVWGKLYEGMVQPSGTAVPAAFGARPLYEADMLVRVKDAAINHART
PYEVLQHIDQVIPFIELPDLIVQAPPQLNGPGVAAINVGARLGVAGQPIAVPATRGERYALLDALERMEV
QLTNDKGELLASGKGSDILGQPLNAVVWLAQALQQEDITLQPGDLVSLGSFSPLLPPRAGLGVTATYVGL
PGARPVQVHFK
>gi|319762320|ref|YP_004126257.1| alpha/beta hydrolase domain-containing protein [Alicycliphilus denitrificans BC]
MTTTGPDSALPSPHHARLTPQMRSVVDRMARAGRPPLHTLTPAEARAAYELGAGVLEVPKAALPRVEDLR
IPARDGLPLPARLYAPGAGRALPLLLYLHGGGFTVGSVDTHDVLCRELARLAGCMVVSLGYRLAPEHPFP
RASDDAWDALAWVAANAARLGADPARLAVGGDSAGGTLAAVSAILARDVGLPLALQLLIYPGTTAHQDTP
SHTEFAYGPVLDRAAIGWFFDQYIPSRAEREDWRFAPLLAPDVDGVAPAWIGLAECDPLVDEGVAYGDKL
RAAGVAVDLEIYRGVTHEFIKMGRAIPEARQAHQDAAHALRAAFLID
>gi|319762321|ref|YP_004126258.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MQRKDFRCCHRLRVRWSEVDIQKIVFNAHYLTYADCAMTEYWRALALPYEAGMQALDGEVYLKKASVEYH
ASARLDDLLDLGLRCARVGNTSLVFECGVFAGERLLAAIELVYVFADPATQTKRAVPPQLRAMIEHFEAG
GEMVELRVGDWATLGRDATRLRMAVFVQEQGIDPTIELDEHDATAVHAVAYNRLGQAVSTGRLLYEAPGD
ARIGRMAVDRVVRGQRWGRMVLDALVDAARSRGDALVTLHAQRSAEGFYRRAGFEVQGEPFEEAGIPHIT
MRRALP
>gi|319762322|ref|YP_004126259.1| hypothetical protein Alide_1615 [Alicycliphilus denitrificans BC]
MRMVRTGGFSYSGTHVRSAAAASVNLPKKAPMQAKTIALLATAAIAGAANAQAVRTEKNMSLELASQIAT
HSIAACAANGYAVAATVVDRAGQVRAQLRADNAGPHTLEASRLKAYTSASAKNSTSAIMEGSQKNPGAAN
LGQIPGYLLLGGGLPVKAGNEVIGAVGIGGAPGGHLDEQCAKAAIDQVQELLR
>gi|319762323|ref|YP_004126260.1| response regulator receiver [Alicycliphilus denitrificans BC]
MTASNADLSPLIHLVDDDDAVRGSLALLISTIGLRVQTWADPLSFAARFDREGIGAIVLDVRMPGIGGLA
LLAQLVDQGVDHPIVLLTGHGTVDMCRRAFKAGAAEFLEKPVDDELLLETLQAAVRQHVRARLQRQADRD
AEQRFAELSTRERQVLALIVQGLSNKEMARALELSPRTVEVHRANLFAKLQVPSLAHLVRRYASLAEVDA
PPTA
>gi|319762324|ref|YP_004126261.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MNGLRRTAPWLLAWLVLAAAGCAWLARQRLQQLHDAFDTDARIAHRVLSQRMVQHEAILATLVLLQPEGP
AAGPVPWSALARPYPQVREVLRHDDAAQAWPAGWPQGMDAALAQSRASGHAMLARSDLASGQLYLVQAGS
PASFALHLDLHATASADDWPLPSGSPVRAWFTLGSQHYEIQGGAETAGRWHWHWRAEKTLAAASQPLALH
MQQTVRADMLPWAAMLGWVAGSAALLAALRQLMRQRVARRRAEQLLQLGQVARLNTLGELAAGMAHELNQ
PLTAVLASSQAAQRLLADDEPNMPLLRQALAQAVAQARRASDVVTRLRRLVERPDAAARTSAIDLPQAAA
DALHLLEPQLAAHKVQVHTQFAPGLPAASADAVALQQILHNLLANALQAIEAMPLGEHQIWITIAHQGAQ
LLLTVRDSGPGIAPDMLPRLFIPFATNRDHGLGLGLTLSQSLAETMGGSLQLHEPAPGPGACFALRLPVH
ATR
>gi|319762325|ref|YP_004126262.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MAERAARIAPAWLATVVLVTLNLRPFLTAVGPLTPAIQAHTGLSLQALAWLTLLPMALMGAGTWLAPAVL
HRVGARSTLALALALLALGCALRLVPAWLIATAALCGVGVALVQGVLPGLIKLHTPRHVAPMMGVYSAAL
MSGGALGAQLSPLALQWGVDWRGALALWSLPVLAALALAWRQLDRMAAPAATGTRGGATAWLLRRPRTWY
LMLAFGLMNGGYASMVAWLAPHYQELGLSAARSGTLVAVLSIAQAVAALLLPVLATRGGPDRRPWLWLTL
GCQALGFALLARAPLAAPLATAIVLGVGLGGCFTFFMLVALDHLHAPLQAGALNALMQGGGFLLSALPTW
LMARLHQGSGGFSSGWWMQCAIALLVAVLVARFAPARFERAMHPPAP
>gi|319762326|ref|YP_004126263.1| cmp/dcmp deaminase zinc-binding protein [Alicycliphilus denitrificans BC]
MTLTPATSTSDIALLRRAVDLAHANRMQGGRPFGAVIARDGRQLATGVNETHQTCDPSAHAEMQALREAT
RARRDASLAGCSVYASGHPCPMCLAALVMAGAERVFFAFDNRDAAPYGLSSEGTYQRLRLPLDPPPLLME
RLDTGISAAQLYGDAPWPETPRG
>gi|319762327|ref|YP_004126264.1| folate-binding protein ygfz [Alicycliphilus denitrificans BC]
MTDPKPVPPPLPAGGVTRLSHLGVIRVAGEDAAKFLHGQLTHDFALLDLQHARLAAFLTVKGRMLASFIA
FKRNDAEVLLVCARELLAPTLKRLSMFVLRAKARLSDATDDFALYGLLGDAARAVLPEGGEPWAKIDLGE
ASVVQLYPADGQPRALWLAPATAGSAPAGAPLDESLWLWSEVRSGIATLTAPVAEAFVPQMLNYESVGGV
NFKKGCYPGQEVVARSQFRGTLKRRTYLAHAPSAIAAGAEVFAEGDAEQPVGTVVQAAAAPGGGVDALVS
LQIAAAGGALRAGAADGVPLALLPLPYALLEDI
>gi|319762328|ref|YP_004126265.1| aminodeoxychorismate lyase [Alicycliphilus denitrificans BC]
MRRFLVLVLLVVLALAAGAAWWLQAPMPVRAGVGAGQPLELEIEPGTTPRGVARAVVQAGFDTDARLLFL
WFRLSGKDRGIKAGNYEVAQGTSPHALLQKLVRGEEALRAVTLVEGWNFRQLRQALARAEQLRPDTEGLS
DADIMARLDRPGVPAEGRFFPDTYTYAKGSSDLAVLRRALHAMDRRLEAAWAQRAPDTPLKSPEQALILA
SIVEKETGRPEDRAQIAGVFSNRLRAGMLLQTDPTVIYGLGERFDGNLRKRDLQADTPYNTYTRAGLPPT
PIAMPGRAALLAAVQPADTRALYFVARGDGTSHFSVTLDEHNRAVNRYQRK
>gi|319762329|ref|YP_004126266.1| thymidylate kinase [Alicycliphilus denitrificans BC]
MTTGLFITFEGIDGAGKSSHIETLARALRAAGRSVTLTREPGGTPLAEKLRALLLNDAMDALTETLLAFA
ARRDHLCRVIGPALARGEAVLCDRFTDATFAYQGAGRGFDLRVLSYMERLAQTGIGLGPDLMLEPDLTLW
FDVPPEVAAERLAAARAPDRFEAQPVEFFARVARGYADRAAGAPRRFARIDGAQPREQVAAQMLAAVAAR
GWLPGAAP
>gi|319762330|ref|YP_004126267.1| DNA-directed DNA polymerase [Alicycliphilus denitrificans BC]
MNAVAPWIAAQRAQLLAQRGHAWLLHGPSGLGQYALALELVRAWLCDAPGEHGACGRCASCHGIDVRTHA
DLCVLMPETQMLALGWPLPEKAQAEIEDKKRKASREIRVEAMRDAVEFAQRTSARGRGKAVLVFPAEQMN
HVTANALLKTLEEPPGDVRFVLATEAAHELLPTIRSRCLGHAMLWPRPDEARGWLAGQGVAPDAAQALLR
AAGGRPDDALALARAGRSPQAWALIPKAMARGDVSALSELEPAQAVDALQKLCHDLLAQRVGAQPRYFDA
ADLPRPPGLGPLTRWSRALIQEARTADHPFNAGLMLESLVAQARQTLNSRH
>gi|319762331|ref|YP_004126268.1| type iv pilus assembly pilz [Alicycliphilus denitrificans BC]
MSSPSTAPRPSVMQLNIKEKAALYAAYIPFFEEGGIFVPTTREYRLGDDVYVLLTLPDDPQRYPVAGRVA
WVTPARAVGNRTQGVGIQFPKDEKSRQLKLKIEEILGTALAADRPTQTI
>gi|319762332|ref|YP_004126269.1| hydrolase, tatd family [Alicycliphilus denitrificans BC]
MFVDSHCHLNFPELASQLPQIRQAMAAAQVDRALCICTTMEEFPAVHGLATAYDNFWATVGVHPDTEDMA
EPSVQDLLERAVLPRVVAIGETGLDYYGMEDRKGGRSIADLEWQRERFRTHIRAARACGKPLVIHTRSAS
GDTLAILREEGEDGAGNRAGGVFHCFTETAEVARAALDLGYYISFSGIITFKNAQDLRDVAAFVPMDRLL
IETDSPYLAPVPYRGKTNNPSYVPFVAQQIAAIRGLPVQEVARATSRNFERLFLQGGAA
>gi|319762333|ref|YP_004126270.1| hypothetical protein Alide_1626 [Alicycliphilus denitrificans BC]
MTSRRRTLAWLALAAAAPVAGLAHAGAYEDFFKAIELDNGAAVADLLRRGFDPNARDPKGQPALIVALRG
DSRKAAAALIAAKGLKVEERNAKDESALMLAALRGNLSAARALIRLDADVNKTGWTPLHYAASGTTQDAA
AMVALLLEESAYIDAASPNGTTPLMMAVRYGTGDVALLLIEEGADPTLKNDLGLTAIDFARQADRADMVD
LVAQAVRRRQPNRGRW
>gi|319762334|ref|YP_004126271.1| hypothetical protein Alide_1627 [Alicycliphilus denitrificans BC]
MERSPTSSSCQHALLVHSPVGHVSVCPDCGVVHLSLDCVSVRLEVGAFLALAEMLSQAQKRLHGMPPHES
RGHEGRARAVH
>gi|319762335|ref|YP_004126272.1| hypothetical protein Alide_1628 [Alicycliphilus denitrificans BC]
MCDECFRPLAAINGSRRKRLWDLPHPCHCPVVGVCFPLPVLRQLVGKALVGKAVADDYEIHLGAVAECMK
RNRLSEVLQKELESRYAGAVQAFRAAKDTQAVADMWAAAVRGGDVPGAFWAVLTHPRCDELLQEAVLRDM
HMLQHQAGAAAWVDAARFGELVKENGVLGRELGRVQERCTRVISEKSVEIERLNAQLVQQRAIAIGKDSR
IAFLTQDLERLQASLPGYEDTARLRRKLEQLGARLAGLEAQNARLRQQLGEAQCLLGLREAEAAPAAEHR
GDAPRESPVAFHFKEKTVLCVGGRNGNVSSYRDVVEKAGGHFAHHDGGLEDKQGALDSVLAAADLVICQT
GCISHNAYWRVKDFCKRTGKQCVFVENPSTSSLTRTLQQITAGDSAEKPAADAGR
>gi|319762336|ref|YP_004126273.1| gntr domain protein [Alicycliphilus denitrificans BC]
MTSPADAPQNLTDRVSEQIRRKLVDGELTPGQRLSEAALSESLEISRNTLREAFRLLTKEGLLKHEPNRG
VSVAIPSIAAIIDIYRVRRLIECQALAQAYPRHPARKRLREAVDKALRCRGEGDWRGVGTANMEFHQAIV
ELADSERLNEMFSHLLAELRLAFGLLNDPEFLHAPYVDSNVKIVELFEAGKPQEAAAVLNDYLVHSERIV
LAAYARRISDAGAGK
>gi|319762337|ref|YP_004126274.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MWLKETSQEERKTLFAAFVGYGVDAFDYMIYTFMIPTFILVWGMTKTEAGYIATGALISSAIGGWLAGIL
ADKYGRVRILQLTVLWFSFFTFLSGFTHSPEQLFVTRALQGLGFGGEWSVGSVLIAEMIRARHRGKAVGL
VQSSWAVGWGLSAIAFWAVYALVEQQTAWRVLFWLGVLPALFILYIRRNISEPTVFRATQERLAKTGQSS
HFMLIFKPGVLRVTVWASLLATGMQGAYYSVTTWLPTYLKMERNLSVLNTSGYLMVLIAGSFAGYLTSAW
LSDRLGRRRCFMLFAVSAAVLVTFYTQLPITDAAMMVLGFPLGFFLSGIFSGMGAYLTELYPSHIRGSGQ
GFCYNFGRAVGSVCPAMVGYMSSTMSLGVAIGYMAVGAYALVVIACLALPETQGRELAEAAEPTA
>gi|319762338|ref|YP_004126275.1| lamb/ycsf family protein [Alicycliphilus denitrificans BC]
MTRHIDLNSDLGESLGAWRMGDDDAMLDIVSSANVACGFHAGDPAGILGTLKAAHARGVAVGAHVAYPDL
VGFGRRNMDVASSDLVADVIYQIGALQGLAHAAGTRVTYVKPHGALYNTIAHDERQARDVIAAIRAVDGS
LALVALAGSPLVQWAQDAGLRVIAEAFADRAYTPQGTLVSRREKGAVLHDSALVAQRMLRLVREGVVEAV
DGSLARVQAQSICVHGDSAGAVEMARAVRMALESDGVVVRPFA
>gi|319762339|ref|YP_004126276.1| hypothetical protein Alide_1632 [Alicycliphilus denitrificans BC]
MQHNALEQARAAAVAAARQARAAYRAGSVRPTAGVAPGMTQANMIALPRDWAWDFLLYAQRNPKPCPVLD
VIEAGAHQTLLAEGADIRTDIPLYRVWRDGRLAQEVQDATPLWAEHPDLVTFLIGCSFTFETPLQEAGIE
VRHIADGCNVPMYRTNRACRPAGRLRGEMVVSMRPIPAHRVADAVAISARFPSVHGAPVHVGDPAALGIA
DLARPDFGDPVRIAPGELPVFWACGVTPQAAVMASGVPFAVTHAPGHMFITDVPDSSYHV
>gi|319762340|ref|YP_004126277.1| urea amidolyase related protein [Alicycliphilus denitrificans BC]
MRFLPVSLNALLVELADLDQTLALLASLQREPLPGVLELVPAARTILVQFSPSATDTARLVRAIAARDLS
QQVRRGGILVEIPVRYDGEDLAEVAQMLGITREELVRRHTGSAYSVAFVGFAPGFAYLSGGHESLDVPRR
ATPRTRIPAGAVGLAGRFSGVYPQASPGGWQIIGTTPLAMWDLERPVPALLQPGFQVRFVDIATLSEAAR
AELESAIAPKHAKPAAPVAADGPALEVRSPGLLTLLQDLGRPGQAGQGVSASGALDQGACRTANRLVGNP
SGMACLETVGGGLRLRSRGDTVVAVTGADAPLTLATAGGARWHVPRYQAVALADGDELAVGEPAAGTRCY
VAARGGFDVAPVLGSRSTDTLAHVGPPALAAGDVLALCAVARGAVVGDAELPPDDLPSVHEDVVLDVVPG
PRADWFTPEALELLARQRWRVTPQSNRVGLRLAGEVPLARAITQELPSEGTPTGAIQVPASGQPVLFLAD
HPLTGGYPVIACVAPHHLDRAGQIPVNAWVRFHPIRPFEAIEC
>gi|319762341|ref|YP_004126278.1| carbamoyl-phosphate synthase l chain ATP-binding protein [Alicycliphilus denitrificans BC]
MLNAMKRVLIANRGEIAVRVVRACRDYGVQSVAVYADADIDALHVRMADEAYGLHGDRPADTYLHIAKLL
DVARKSGADAVHPGYGFLSESAAFAQAVMDAGLAWIGPSPRAIARLGDKVEARKIALKVGAPLVAGTPEP
VKDAAEVLAFAGQHGLPIIIKAAFGGGGRGMKIAWRMDEVAELYASAVREATAAFGRGECFVEQFLDRPR
HIEAQVMGDRHGRVVVLGTRDCSLQRRNQKLVEEAPAPFLTDVQRQRIHQAAHDICAEVGYEGAGTVEFL
LSGSGAISFLEVNTRLQVEHPVTEQTTGLDLVVEQLRVADGLPLSIAETPAPLGHAIEFRINAEDVGRGF
LPTPGQVARFDPPAGPGVRVDSGVQAGSIVPGTFDSLMAKLIVTGATREQALARARRALAEFRIEGVASV
LPFHRAVMEHADFTGADGFKVHTRWIETAFANDLAAAARAEPQPDAALVRCTIEIDGRRMQLGLPAALLQ
GLASAGGGAAAAAPAAQESTDEAAVASPIAGNLHAWKVGEGDAVREGDVIAVMEAMKMEMQVAAHRAGRI
TLQAAAGSYQAAGACIARIC
>gi|319762342|ref|YP_004126279.1| lipid a abc exporter, fused atpase and inner membrane subunits msba [Alicycliphilus denitrificans BC]
MQDSNHSATKTGSPQAVQPLSLLARLRRLHTYFGHQRLAWAMALLATVVAAVTEPLIPALLKPLLDQGFT
EGSLQLWMVPVAIIGVFLVRGLAQFTSQYALTRIANEGMLRLRTALFERLLAADMRLFRHQSASALSNTV
VYEVQTGFTSLVQALVGLSRDGFTLVALLGYLVYLNWQLTLIVAVLVPGVAWVMKALSRRLYKITKSSQQ
ATDDLAYVVEENVLAHRMVRLHGAQAGQGERFDTLSQKLRRLAIKSTIASAAMTPTTQLLSAGALSTVIC
IALWQSHGHGVKDVTVGGFASFIAAMLMLIAPMRRLADVANPITRGVAALERGLVLLSDTPAESGGSHVA
ARARGAISLRDASVRFDAEHAPALDAVSLDIHPGEVVALVGPSGAGKTTLVNLLPRFVTPSGGQVLLDGV
PVQDWDLDCLRAQFAMVSQDVVMFNDSIAANVALGAPVDEQRVQQCLAAANLAQHVAALPQGMHTVVGHN
ATQLSGGQRQRLAIARALYKDAPVLILDEATSALDTESERLVQEALQRLMRGRTTLVIAHRLSTIEHADR
VVVMERGRIAEQGTHADLVAAGGLFARLQAHGS
>gi|319762343|ref|YP_004126280.1| tol-pal system beta propeller repeat protein tolb [Alicycliphilus denitrificans BC]
MTIDRTPPSTSLPSTLLPLSRRHAVAALAAGSTLPALAQFRVEITGVGLTQLPIAIAPLRGEAQSPQKIS
AIVQADLERSGRFTGVDATGVALDETSRPDLSQWRQRKADALSTGSVTRLADGRFDVRFRLWDVVKGQDL
GGQSFTVTQADLRLVAHRIADFIYEKLTGERGVFSTRIAYVTKVGARYSLWVADADGENAQSALSSPEPI
ISPAWSPSGAQLAYVSFESRKPVVYVHDVATGRRRLIANFRGSNSAPAWSPDGRTLAVTLSRDGGSQLYT
IDANGGEPRRLMQSSGIDTEPAFSSDGRSIYFVSDRGGSPQIYRVAAGGGNAERVTFNGAYNISPAISPD
GQWLAYISRVGGAFKLHVMDLRSGSVTALTDSSADESPSFAPNSRLILYATQQQGREALMTTTLDGKIKA
RLAGQGGDIREPDWGPFQKQ
>gi|319762344|ref|YP_004126281.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans BC]
MKQSSFKRVSLALTIAALMAGCSSGVKLDDVPVEDKGATSTVPGANSGGTSQSGVAPVDLTQSGREAGGP
VGVARIIYFDFDSFTVKPEYQSVLEGHSRYLKASSARKVMLEGHTDERGGREYNLALGQKRAEAVRRSLA
LLGVPDAQMEAVSYGEEKPAAQGHSESAFAQNRRVELSYR
>gi|319762345|ref|YP_004126282.1| tol-pal system protein ybgf [Alicycliphilus denitrificans BC]
MAARMSFPHRSRVLSTVVFAAAATWAMPSHALFGDDEARRAILELRQRVDALQQANQRAGERSGDEVSQL
RRSLLDLQAQIEALRTEQASLRGQNEQLLRDVAELQRRQKDMARGVDERLRQFEPVAVNVDGREFRADPA
EKRDFEAALAVFRSGKFPEAATAFGNFVRQYPQSGYVPSARFWLGNAQYATRDYKEAIANFKGLLAAAPD
HARAPEAALSIANCQIELKDTRAARKTLEDLLRAYPQSEAAAAAKERLARLK
>gi|319762346|ref|YP_004126283.1| uba/thif-type nad/fad binding protein [Alicycliphilus denitrificans BC]
MHEPADLERRFGGLARLFGVEGSTRIRAAHVAVVGIGGVGSWAAEALARSGVGRLTLIDLDHVAESNINR
QIHALSTTLGQAKVHAMAERIALINPACRVECVEEFVEPANWPAILPGPVDAVIDACDQVRAKTAMAAWA
LQNRRPFITVGAAGGKRLAHKVDVDDLAHTTHDPLLAQLRYRLRREHGAARDGRRMGIACVFSREAVAPP
HASCAVQEGDGTLNCHGYGSSVAVTATFGQCAAGWVLDGLSGKP
>gi|319762347|ref|YP_004126284.1| integrase family protein [Alicycliphilus denitrificans BC]
MSISYDKRNKRWRFEFDRYIAGQRQRTSRLLPKGYTRAEADKFDLEETKRLHAIATGVSKPEPLIEDAVL
LYLKHHAPALKSFENIRRELQACFEAYAGKPFSALPAVALNYKPKDADGKALSAATARNRLAYIRAACRY
AWKHHGMGDANPASSLPMPKVRNERHVYLGRAEFLAICRCIKPGPSRACIRIAFYSGMRAAEPGMAAVSS
DGSAFILAPEDTKNHLPRVVPVHPRIAHILRNPALWPPRRTKWTVSKEFKAGARLAGMGHARLHDLRHST
ASEMINAGVDLYTVGGVLGHKSAVSTRRYSHLATKTLAAAVALVGKKPRTTGKKKAA
>gi|319762348|ref|YP_004126285.1| hypothetical protein Alide_1641 [Alicycliphilus denitrificans BC]
MIAALYVETGGAYFGLPGVDPWDEARDARQYCGPWPVVAHPPCQRWGAMANVNYARWGGEHNRPGNDFGC
FKAALRAVQTFGGVLEHPAKSRAFDFHGLSRPRGLGWQPCRTGGWVCEVWQSAYGHRANKATWLYCFGTE
RPPELRWERPIGSHQVGFHDQRGKDRNKPTLSRREAAATPPAFRDLLIGIARSAARERVS
>gi|319762349|ref|YP_004126286.1| hypothetical protein Alide_1642 [Alicycliphilus denitrificans BC]
MARLADTEVERRLGYTPCVCGQLDGTWHPECYRNKTRQQTNALTKKAIQKAREQFAAEDRGIKKENGNGL
PT
>gi|319762350|ref|YP_004126287.1| hypothetical protein Alide_1643 [Alicycliphilus denitrificans BC]
MTTNTNAAKVANNLIAVAEGQAFEAWYKQDYLVGGVNARIAARAAWNARAALTTAAAVPPELSPDFTDTA
RAALLWVLWHHQGGSSPVGQPIRFALGMGQHDRLNEHQLAEAKRWERLHPANPAVFPRGPEPLTDGLLQQ
HNRDSQELRRLCAARDQARSERDALKAEIAGLEASCSTLGRLVDELRPDAERLEWVLRRVSGTWLRAYLG
VVSDTSDMDTLRTLIDANRGALTAHGIGIKKEENNG
>gi|319762351|ref|YP_004126288.1| hypothetical protein Alide_1644 [Alicycliphilus denitrificans BC]
MSIDYIRKTYGLTVKVGDQVSIRKGAGTWFDGLHGKLLRAQGQYLVVAGETWRGNFHPADVEPIQKDTP
>gi|319762352|ref|YP_004126289.1| hypothetical protein Alide_1645 [Alicycliphilus denitrificans BC]
MTEAKQPEALRLADQLRALSFGGTCILAAAELRRQHARIADLEAQLSAIGAGGVEPLRPRQCLHGISEPS
EWRDIETAPKDSGYVLLRGRREQDVASGYWLQSAYAGNGAWIWPFVHMTPRFWAPLPPSPSSADEGGSNE
H
>gi|319762353|ref|YP_004126290.1| hypothetical protein Alide_1646 [Alicycliphilus denitrificans BC]
MTVRWIPTTDEVYSAIRRTHHQHMQVHGTITDLGEFSGCERIMTEWGLPGADYPLVKVDSKDGIASYWIA
VITKDEEA
>gi|319762354|ref|YP_004126291.1| hypothetical protein Alide_1647 [Alicycliphilus denitrificans BC]
MPVPPTTRDAITAALKECGPMSVPEIAEHLGLARNVINTCMTTARKNHPGKFFRILRYRPQIGVSGRETP
IYSASPGPDAPRPVFDKAEGRRSHYQRNRARLAAERYRRRGTEATWLSGLMPLARRNYPPTART
>gi|319762355|ref|YP_004126292.1| yqaj viral recombinase family [Alicycliphilus denitrificans BC]
MIHHDYEQGSEAWLAVRKGCITGSRFRDCRDKLKGGQPSKACIAYAMDTARERIGGCAPAKFQNAAMRTG
TEQEPLARMAYESRTGNLVEEVGFFTTEDGLYGLSPDGLIDDDGVLEIKTMVSSDTLFTAVADGDLSAYM
DQCLGYLWLLGRQWVDLVLWVPDLNYMAIHRITRDENAIEALEADLLAFAELVRKYEAKLRAALAANAPN
AREAA
>gi|319762356|ref|YP_004126293.1| erf family protein [Alicycliphilus denitrificans BC]
MNETTQADVLELAPVERTAQPMTTRQAAVPAMAADSSALTQAIITAAHDPSVQIEKMERLLAMHERIAAR
DAEQQFNIAMAAAQSSMGRVSADAVNPQTRSQYATYAQLDRHLRPIYTTHGFALSFDEGSGAPENYVRVL
CYVSHTAGHTRTYRCDIPADGKGAKGGDVMTKTHAVGSGKSYGKRYLLKDIFNVAVGEDDDDGNGAGAND
TRAAEAQAKFDALMERIPKTTTDEAAAALWREGSGALADFKRRDLYDAFKDAVIKHRKGLKS
>gi|319762357|ref|YP_004126294.1| hypothetical protein Alide_1650 [Alicycliphilus denitrificans BC]
MKRMREFLSLYRAYRECDGLCAAARYAWIVSGG
>gi|319762358|ref|YP_004126295.1| hypothetical protein Alide_1651 [Alicycliphilus denitrificans BC]
MSERDPIWDDIKAYKKEKFDNDRARFLANAQQQDDGGWVKHTEFHWSRTVAGKRLDYWPSRKKWQYEGSV
QRGDVQRFIKNKERP
>gi|319762359|ref|YP_004126296.1| hypothetical protein Alide_1652 [Alicycliphilus denitrificans BC]
MKEAILIIAAALTIGVGAVAGNEAEADRQDAESLSSRDWAAREVCEGRPFEWQGDVLICHRERP
>gi|319762360|ref|YP_004126297.1| la ribonucleoprotein domain family, member 4b [Alicycliphilus denitrificans BC]
MADSTTTTPAKHDMDNMHPMMIEALCDHMPHIEPNTPPDEAERVRADIEYQKHRERWREDRALALQWRYG
DGQ
>gi|319762361|ref|YP_004126298.1| hypothetical protein Alide_1654 [Alicycliphilus denitrificans BC]
MATHTLVVEFDGDGPAYAAGDTVLGGRLVAVDFGGNRLAVADELLGTLQAVLDDVQDIDNDSCLSVGVGR
QVRAAIAKATK
>gi|319762362|ref|YP_004126299.1| hypothetical protein Alide_1655 [Alicycliphilus denitrificans BC]
MQKPMTLTGDGNVPAMPMTGAQVNHLRRLLAWMRCEYMLDEDMQRGYLQGLQMCAAHGLADDERASELLA
EKAEQINRVPIYVRQAVKMLTKALREHDKTSGIVEQ
>gi|319762363|ref|YP_004126300.1| hypothetical protein Alide_1656 [Alicycliphilus denitrificans BC]
MKTKIALKYEGPALQGGAMDVYQTSSNMIAFTEFMVAAVKETYGDSAQAKAEVSGFERGSFVTNILFSVG
GMASTIFTALTPDQLLEVVKGAFEVWKHLKGKPPAEVSQIDQQINVTNNDGQIINVRTESFTLVMNPKAA
DAVDKFVNQALSVEGVDALRLGNEAKPIAHVAANEAAYFVPVAAVVPMSDNTLQMILTVISPVFQDGNKW
RFSDGGSSFSAGILDGDFLMRVDKGIERFGKGDVLEVEMRIVQSRTGQKVSVEREILKVLRHINPNEQVQ
QLLL
>gi|319762364|ref|YP_004126301.1| hypothetical protein Alide_1657 [Alicycliphilus denitrificans BC]
MNQADVVLKIVEMAKVGGSLPPESAIAHVAALIAELDVHSASYERDMERLVKIGATIWDLHSGPDGAYDP
TWIPTFLRS
>gi|319762365|ref|YP_004126302.1| hypothetical protein Alide_1658 [Alicycliphilus denitrificans BC]
MDARDNPYVPGAGTPPPELAGRHEVLERAEVALTRIQRGRPSKSLIVVGLRGVGKTVLLVRFQNQAIDLG
YQAALIEAHEGKTLPELLVPPLRKILLSLSALKAAGEKGRQALRALRSFMGTVKVKWSDIELGIDPVMGV
ADSGDLEVDLADLFVAVGEAAAEKKTAVALCIDEMQYLSNKEFSALIMAVHKVSQMNLPIVVVGAGLPQI
LGLAGESKSYAERLFDYPKVGALSKEDAVLAIETPAKNMEVFYDTEALNRLVAVTKGYPYFLQQWGYEVW
NIAESSPITLDDVDQATEAAIAALDESFFRVRFDRCTPSEKRYMRALAELGEGSKRSGDIADCLGVKVTS
IGPTRSKLITKGMIYSPQHGETAFTVPLFDEYMRRVMPGNDWRKN
>gi|319762366|ref|YP_004126303.1| nuclease (snase domain-containing protein) [Alicycliphilus denitrificans BC]
MLAAALLCLVVGISDGDTLTARCPTEDAAHPYQQVKVRLAGIDAPERKQPFGSRARQALADITFQKQARL
DCVKQDRYKRSVCNVWVAPASAPDGPQTLDAGLAMVTQGMAWWYRSYSRDQTPEARGQYEFAETEARARR
AGLWADRDPVAPWEWRRQR
>gi|319762367|ref|YP_004126304.1| hypothetical protein Alide_1660 [Alicycliphilus denitrificans BC]
MKKTLATIALLAASAMPGQASASVYEFKTLTNECRIIATGEVVGPICGGTFGLDDVDGLRVGLSGSAGEL
QIRTDWYGGGAYHEGSYYNSGVTYTNFERVGTMVDLDAEYCFGWSGPRICRVNANFFSDNLLDILLGSLY
ILNDSDQVDMWSDGSGLWSGFYGSDSIYSRRQFFTGVWYEVPEPGSLALIGVGLLGMMGLRQRRVSR
>gi|319762368|ref|YP_004126305.1| peptidase s24/s26a/s26b, conserved region protein [Alicycliphilus denitrificans BC]
MHNCIESKAFLHYALMHSPAMDGRTFLKAVMDARGLNPHALGAKSGNPSLQSTVHRYLERKVNEPRRATL
QPLADFLQVDVAAFFDADKARAELARLGLLAGPREESNITEGPAIRGLYPLISEVQAGMWTELCDNFARG
DAEDWLPSTKDLGECGYMLRVRGKSMENPGARLSFPEGMVLHVRAHLDAVPGDFVIVRREGTGEATFKKF
VMIDGHPYLEAINPDWPKELKYLPMQPGDVWCGVVVDASLGGLSRT
>gi|319762369|ref|YP_004126306.1| helix-turn-helix domain protein [Alicycliphilus denitrificans BC]
MQSISEILRGLRETLSQSEIARRTGISQSKLSRWESGEIAAGADDALKLLALAKHPTPKKQAPQGHKEAA
HG
>gi|319762370|ref|YP_004126307.1| hypothetical protein Alide_1664 [Alicycliphilus denitrificans BC]
MNGISAEALDGKIEALNQVLAQLVTVLTPSQAAQAAAGLAVERHSFRDLVDYSTPEETLAVQDQVLDAYL
GLLSTVAKRDQ
>gi|319762371|ref|YP_004126308.1| hypothetical protein Alide_1665 [Alicycliphilus denitrificans BC]
MPSAVIQPAQLTLNFEPGLIDRYGSLRECVATGVYQRGLKRVAIDLDQAPSNLSVQLSEDTSRHFSVDSL
ERYIEKTGDKTPVLYLVERFLAPELQNKGIKQVEAMKAQLQAMLQQLDGVVQ
>gi|319762372|ref|YP_004126309.1| hypothetical protein Alide_1666 [Alicycliphilus denitrificans BC]
MTKKPTKVLSINGRKAATLAPAGLPKLTRAQFAVPVNGPITNASMPNAPQGYAWPWLATPPRG
>gi|319762373|ref|YP_004126310.1| neutral zinc metalloprotease [Alicycliphilus denitrificans BC]
MHSEQDARIAGLIDERRKVAARLADLDMQIAQAVGDREGMRRAQREMYAQVEARKAARFAAWEASH
>gi|319762374|ref|YP_004126311.1| hypothetical protein Alide_1668 [Alicycliphilus denitrificans BC]
MANQWLRLWHDMPTDPKWRTIARHAKQPISLVQAVYLHLLVDASRNVTRGHATVTYEDLASALDCDEQQI
SAILEAMQGRVLDGMRLVGWDKRQPKREDSGDDERGVKSAAQRKKEQRQREDNAMNSVVETVFDDMRDTK
DDAQCHAVSRNVPLDKDTDTDKEEPNGSSSPASLTTDHGQQHHAASRDVTPPCPHIRLIELFGELLPSLP
QPKPELWTGKSADAMRARWKWLLTARRKNGQRYATTTEEGISWMVRFFEYVGKSDFLMGRRGEFQCTLQW
LVKAENFSKVIQGNYDNREAG
>gi|319762375|ref|YP_004126312.1| dnab domain protein helicase domain protein [Alicycliphilus denitrificans BC]
MNRDEYAEALMHALEAEACVIGALLLDNGSWDRLGDKLRPEHFHDDKHRMVFAEIARQLGAGKPCDVVTV
ATALGDRITLQDVHELAQYVPSAANLRRHAELVIERFKSRQLQAVSAQLMELSQDHGTSIADRVDRAQAQ
LGKLIDEAPRDEWVSAYEGMTIHTGVLEARAEGTIRAMPTGLHDLDEYLEGGLRPGELVIVGARPSMGKT
ALGLTIGVHMAAEYTVGLLSMEMSHSEVNDRLTAMLGRVSLSSVKRPARGEGLAWDRVMDGVEHAKTLNF
HTSDQGGLNINQVRSKARNLKRVHGLDVLVVDYIGLMSGLDAKANRNIQLEEISRGLKGLAKELNICVLC
LAQLNRKSEERPEQMPMMSDLRDSGAIEQDADVIVFIKRPIMANPDLGPDWEHYAKLRVAKNRQGRCGDL
HLSYTGEQTRFSGWAGPAPSKSTPTVQRGPVRRGMDAGERF
>gi|319762376|ref|YP_004126313.1| hypothetical protein Alide_1670 [Alicycliphilus denitrificans BC]
MKDLTLKMIHDRCDEVVDCWIWKDAVGQHGYPIMRRRPGGCQLVRRVVVALDGRPAAARQPVTCTCDEKR
CCNPAHLKPSTPSAVGKAAAAKGSFSTKARAARIAQWRRSSGATKLTLDLVREIRSSEETGPVLAERYGV
NRSLIGSIRCGTAWKDYSNPFSGLGGR
>gi|319762377|ref|YP_004126314.1| hypothetical protein Alide_1671 [Alicycliphilus denitrificans BC]
MAEYDKQVAHLTRLALTPGWWQYARRRALELEADMPGIRDAVRQQVEASGYRPPPEERGEWWLP
>gi|319762378|ref|YP_004126315.1| endodeoxyribonuclease rusa [Alicycliphilus denitrificans BC]
MLPWPPKELSPNARIHWSKLARAKKAYRAACAWTATEQGAQRVAADKLHLSLEFYPPNRRAFDLDNALAR
MKSGLDGLADVLGVDDRHWSLSIARVEEIGGYVKVEVRRA
>gi|319762379|ref|YP_004126316.1| hypothetical protein Alide_1673 [Alicycliphilus denitrificans BC]
MPEIVLVRQEPAQITEQDAAVARRVIFGIVDGLGDKGRKQWRRLWSRIMGLEPGEMMEITTVQPRLGWYH
RKHMALEQAVFEAQERFEDFESFRTWLKVGAAFVDWFPGPKGGVIPVPRSISYAKLEQGAMEQFHNDAVA
FLRTEHAGRTLWKHLSERQRIDMIETILGGFNE
>gi|319762380|ref|YP_004126317.1| hypothetical protein Alide_1674 [Alicycliphilus denitrificans BC]
MMRRTPLRSRKDTAVRVDRETLLAARAARTMAEARPRAATMADAGAAARIIEKAKPWRSEAYRRAVASLP
CVICGVHGYSQAAHGSEGKGMGIKACDTTLFPACASRPGVLGCHHKLDQGALFTKAVRRELEPVWAADTQ
RRIHAMGLWPAGVPYPHEDQGSHRDN
>gi|319762381|ref|YP_004126318.1| hypothetical protein Alide_1675 [Alicycliphilus denitrificans BC]
MKTKGATVTTEVQTKAITSTQRIYDAVCELHALEQVVTRETVAELTGIKLTVVDDRLGALVDNEKIKRIL
RGVYVPVERHPPARAISKSVLPDGMVMIEIGDEVLHLTPREDRALALVQSGAATQAVAIESSRQTSMLVA
EMAAELQRIKREYAALKAHKEDSLQLALGV
>gi|319762382|ref|YP_004126319.1| hypothetical protein Alide_1676 [Alicycliphilus denitrificans BC]
MPNPTAGKKPAPPKTDTAAPAASGKDAGIAAPDWERIELDYRAGIKTLRQIADEHGITHGAINKRAKRDG
WERDLSGKIQAKADALVSKAAVSSEVSKESKIAEKLVIDANAQAVAEVRLAHRRDIQRARRLTNALLDEL
EQETDRDTLEQLKKLGELMFEPDEKTGRDRLNELYQAVISLPERSKTMKTLAESLQKLVDMERAAFGMDK
DQPREADPLAALLARIATGNGNGFAPVASDPERPSSSLLVRADPADED
>gi|319762383|ref|YP_004126320.1| terminase large subunit protein [Alicycliphilus denitrificans BC]
MLMPVRNARLNRLPDSAQELERCLTDPEWRLFSGCLYKIMVKGDSKDGQEGEAFSMPFVPNRAQRRFIKR
LWHRNIILKARQLGFTTLIAILWLDHALFNADQRCGIIAQDREAAEAIFRDKVKYAYQNLPEEIRERFPL
ARDSASELLFAHNNSSVRVATSMRSGTIHRLHISEFGKICAKFPDKAKEVMTGSIPAVPTTGILVIESTA
EGANGEFYDLSKRSQALHYSHQKLTPRDYRFHFYAWWQEPNYRMDATQVSISREMHDYFDGIEQEMECQI
DPEQRAWYVATQQADFPGREERMWQEYPSTPDEAFQQSTEGHYYAKAMVELTKRGGITSVPVLDLPVYTF
WDIGRSDGTSIWFMQSLRGEDRFIDYYEEHNEDLRHYARILQEKGYLYGAHYLPHDADHKKLSDTNRSTR
EQLQALLPGQSFRIVPVITQLVTGIHAVRKHIKGAWFDKERCAFGLERIRGYRKKFNQAQGRFIDEPDKS
NGCSEGADALRQWAQAKDSGLFAPSDDGYGINNDYQEPEAPDWRM
>gi|319762384|ref|YP_004126321.1| phage associated protein [Alicycliphilus denitrificans BC]
MRYLKPPANADMGQALTLREFAAIIDEAIDQPPWRAQADIEADYVDGNQLDSKLLQRLKAIGIPPAKENI
IGPAIAAVCGYEAKTRTDWRVTPDGDPDGQDVADALNYRINQAERHSKADVAMSDAFRPQASVGLGWVEV
ARSSDPFGYGKRCRYVHRNEIFWDMRAKEKDLSDAGWLLRERFIKKSRVAAAFQEKADLVNQAEAASGMG
GYGGYVVEGGVSTGLLAGAETSRAWTSREQAWYRKESDEVCLVELWYRRWVSAVVLRLRGGRVVEFDLSN
PMHQAAVASGQGVLERTTVARVRRSFWMGPYCLHDGPSPYPHPYFPYVPFWGYREDMTGVPFGLVRDMIF
PQDNLNSTIAKLRWGLAATRTERTKGAVAMTDEQFRRQIARPDADVILDAEHFKGNSGARFEVKRDFQLN
AQQFQMMADSRAALDRVSGITAAMQGRQGTARSGLQEQTQLEQSQTSIADLMDNFKEGRALVGEMLLAME
IEDLGSEESSIVIEGDVLNPPRTVVLNHPEIDLETGIPYLSNDVQRTRLKVALEDVPSTSSFRVQQLNAL
SEAAKSMPSEIQAVVLPFLIDLMDLPRKKQVVEAIRTAQAGGQADPDAIREQVKQELMHDLKERELALKE
RIGDAQIEKLVREAVQVGVQSAFSAMQAGAQVAQMPMIAPVADAIMQGQGYQRPAAGDDPNFPTAQVQAA
VQMKEPYLQGQGRPADDGVQEVRENTSPQFPPVPQEPGTGQRGIETLSPGDNLPA
>gi|319762385|ref|YP_004126322.1| hypothetical protein Alide_1679 [Alicycliphilus denitrificans BC]
MEHRLTTEAQQLLDAAFAGKLDLDADASQNSAAAAAAEGAAGQRTEEPKTNAANDKQAGAAAQDDEPAGA
PIASKSGAYTIPYEKLTQARQERDTLKAENEQLKAQVTQLTAAQAQNLAAAQEQAQARADAGQAPTEADK
NLAVAQAAAAQGVDMALFGDFSEESIANGVAALVEQRAAALVDARLKDALAPFQQREARSSADAHTQAIY
AVHKDADEIYESAEFKKWMGEQPGYARAAIEHALANGEAPQVIEVFSTFKAATGKTAPADAVTKALEAVK
VQPPASLSELPGAVGTSDAERVTALADDPAKLLDFMAGLSPEKQNRLMNSVV
>gi|319762386|ref|YP_004126323.1| phage associated protein [Alicycliphilus denitrificans BC]
MTKTVVGAGSPNAQFVQAAGLFAQSMQRNSTLNRMVGKMPSSEGEVNQVLRKQTSTDMPIVRTVDLSRGK
GDEVEFHFVQPVGAYPIMGSRMAEGKGTGISLDKARVRVNQARFPIDVGDTMTDIRSPVDFRKIGRPIAQ
SLMDAYQDQSMLVHLAGARGFHDNIEWRLPTADHADFAEMAINEVKAPTANRHFVADGDAIKPFTVVGGE
IDLQTTDLLDMDIVDSVRTVIESIALPPPAIKIPGDKVAEDSPLRCLLVSPAQYHAFAQDPNFRQFQANA
LARASKAENHPLFLGEVGLWNGVLICKMPKPIRFYAGDTIRYCASKTSETESSCVVPAGFGTTHAVDRAL
LLGGQALAQAFASSRHGGMPFFWKEKGFDHDDKMELLIGAIQGLAKVRWLVDQGGGTKHFTDHGVFAIDT
AVPIIGARQ
>gi|319762387|ref|YP_004126324.1| phage associated protein [Alicycliphilus denitrificans BC]
MANITKKANPRVNVGASPWGNAHGLLYTLQTAANGGAIGADSGAAIAQGDKVRLGVIPAGSTLLDSLAVV
STAMTAAVVGDLGFEYVDGVDDAKVPQDADYFGASLALNATGRLRNATTNPPVTLPKDAWLVLTTGGAAN
AKASRVDVVLTVASEGTA
>gi|319762388|ref|YP_004126325.1| hypothetical protein Alide_1682 [Alicycliphilus denitrificans BC]
MKQAGSPGLFSIQPKESAMNLTRITYLGRKTYREKISNNTWEQGDTKLVTTDAAKRLLRFAEFESAKQEA
ERAQAHVGKKDEGEQKPTDPELEAAMLRQQEAERAQAQERQQVESMLLTVESMDKPALEEYARKYEVELD
KRLGVAKLRAEVSTLIEQFGVR
>gi|319762389|ref|YP_004126326.1| hypothetical protein Alide_1683 [Alicycliphilus denitrificans BC]
MNLEQLVERFRIDADDLVEPYLWQPEWVVGWLNEAQDEAAVRARLLLDDYTPGLCEIAVEEGRGSYPLHS
KTYEIAHLQFESTGRPCELDMVSREKLDRIEPRWRQLAADAPRWAIQTDTRLRLVPAPREAGLLRLEAYR
LPMRALAQDRDKPEIHEAHHLHLVQWALYRAFSKPDTEVIDPTRAAQALDNFERYFGLRPDADLRRSTRQ
DEVQANVSHIL
>gi|319762390|ref|YP_004126327.1| hypothetical protein Alide_1684 [Alicycliphilus denitrificans BC]
MYGFNPEKHKDQPNAELPKLGFKPRKSAPADAAAPELPASTAPGRGFRPGMKEEMAAPSVGLGFRPGMGG
PVTTDALPGLGFQPFKDAMRAQAQNQAPDSIPAMVKPGEFVLPPDTVHAMGGAQVLQGVVDATHTPAPEA
AIVPRGFKPRAYFADGGLAGPKREDYVGNAFKTMEQQRAASAAQAQAAGAQAEADGAAAASRKVAQTGMA
PAPNSPSNTFPGNRLQGTSGFSGAPMGAAPAAGAAPVPAPAAPATAPTAAGFMPGTRAVFNESGKAIGDL
ASQGRYGAAAGEAARAALAYAPAVADDVIGGAARAVLPAVVDAGKQFLGMGNTPAVPPPAASTAVARPGA
SPVAPAAAPATAAVPASSAPATSSGDVTRVGNSYSGTNVSGDITVNGQAPAGGFMVADAPQARGFRPGMG
SSAPAPGQGFGFRPGMGAAADGPAPRLGFGPGSELARIQAQAAQPGFSGVIGQQGGNGNMWSRTPEQQRR
DAEVQASSIHRPTAAIGANALRSLDAQDLEGVRGANALAQENVRQAGGLQREGMQQQGANTRAAMSSAVD
QQRVNQEGRRVDSQVEAQGFANRQAAQQEQLRAILADPKAPITQKMEAQRTLSALAGQGDRWKPVALQGG
TDAQGNKTESILGAVNERTGEMRRMDGGAQGGGTMPPAGAVAALRADPKRAADFDAKYGAGASQRVLAQR
>gi|319762391|ref|YP_004126328.1| hypothetical protein Alide_1685 [Alicycliphilus denitrificans BC]
MSTAAETQPSMPLRFARHIVGMMILALASPYVWYGSQGALTWASTWITPLVIAGVAFGLYALFFTKRAKA
AWPGRFFMLAWVLLALVVAAPYLETFNQKRAAQQVPVQQEQPATEPAAQAAQPNFFDQFDHPAPRSREAY
AARVKALRSAGEAGDLLIVEVRQPSREDNSLGRWSTLDVGRVEAEQTWWIANGIVWLHVANHSKFNMNVI
QFEYAPGLCGNAAPESYASYNLPLKQAITPGTEALIRFAAGDVVHGGDGCLNVTGILG
>gi|319762392|ref|YP_004126329.1| hypothetical protein Alide_1686 [Alicycliphilus denitrificans BC]
MRKISHKRQMWLLRRQRVWCKGHKFLAGVAKTKTKPKIKRDVLVAPGYFCLASSNNVRSEASAQFLAFLR
SIRDFRGSGLCIDMSRVQRMVANATLLFKAELSYQIQRGVSVGGVMPRKARTHQVLTQTGLTRMLGLPEC
KHVDREDTVHWRHASGSWSVTQPSHLSSLLGGNEQQNALLYTGMIESVANCIEHAYREHPKRRAFGAGHD
GWWGFQQLRDGVLSTCICDLGIGIARSLPLKLADEPTLYKKLVALFNHLRGDDVRGILAAIEYGRSSTGL
VQRGKGLRDAHRVIDDAGEGHFHIFSNQGMYIYRKERGKEPTSGTRRLAESIEGTIYYWQYPLQSQGAVG
VIPIGGVLS
>gi|319762393|ref|YP_004126330.1| hypothetical protein Alide_1687 [Alicycliphilus denitrificans BC]
MTTLSVASQFSRYPGGRFKRISENSGEQFREDVLLPALQKDGLVVVDLDGVVGYGSSFLEEVFGGVVRAK
RWKSREEVNKHLRIASEKESWLREANMYIDAALALLK
>gi|319762394|ref|YP_004126331.1| hypothetical protein Alide_1688 [Alicycliphilus denitrificans BC]
MLFDGFLKYLPSVLVVLGWAIAYKLQALQARRKLLREEVEKTRQAVEKLREIALQFHVNVYDPEKRGAIV
IALTDIERRYGMFPEIARARSECSFNAVDISKTRVDAKYLTELRQAITLEHFEDPESAPLQHGHEQLERI
TVAASALIGELDKVLVAALD
>gi|319762395|ref|YP_004126332.1| hypothetical protein Alide_1689 [Alicycliphilus denitrificans BC]
MTKSGNTSAFRVIRIDGSILAEHYYLAPDDECYCLGEYQPGGGYGAGPVNNLISNFKKSVDRKGRSEYVY
KERAIAQVASYVGQVLKPEVLERFTVVPVPPSKAKTDPLYDDRLVQALNLVRPKLDVRELLLANRSMQAH
HEYQSGVKRPTPDDLCQHIHINEACLTTPLREVIMLFDDVLTNGTHFKACQRIIRERFPDRRVFGLFIGR
SKRPDPLEDFD
>gi|319762396|ref|YP_004126333.1| smf family protein [Alicycliphilus denitrificans BC]
MITSELFAQQAVSPALELGAYEELWSQDGQSFKTLAELFRKSHNDLPSQFVSSDQAIKRAREVLEIFRKK
HIEDAGFVVQGTLEYPEELRSARHPVQFLYYRGNLDLLYTPWRVALVGSREASDEGIRRARRLARCLVAD
GVVVVSGLAKGIDTAAHTAALEAGGQTVGVIGTPISEVYPRENSELQEHIARNYLLVSQVPVIRYMQQTP
KWNRLFFPERNATMSALTQATIIVEAGETSGSLTQARAALEQGRKLFILNNCFERGLKWPARLQAAGAIR
VSDYDEIRQHLGISGNSH
>gi|319762397|ref|YP_004126334.1| hypothetical protein Alide_1691 [Alicycliphilus denitrificans BC]
MADNYFDQFDSPAATESASKGNYFDQFDEKPAARSAARSAGDSAIAAGTGVIQGVKMLTDVAGADNAVSR
TLGNASDALTDLESPYRKAQKQERAAKIKAAEATGSTWEEIKAHVGAFADAPLDTTLNALGTSAPTLAAA
ALSGGSSVAAQIAARAAPVVLGVAQGAGNIKGQVHEAVKQKHLEAGVSEAEATQRADAAQAYDGSNLGSI
ALGGALGGLAGGTGAEAAARRLLGRKVAAEAAEHAAPGVIRSAVTGAAKEAPMEALQGGQERHASNVALQ
GEGFDVPTWQGVAGQAALEGLAAAPMGGGFGVAEGMHARGRQTSDPISEGVAARQAAEAAAADAQAKADA
AVPPWTTDLGAADPNAQAATAAATDANAPRVAEAQFETQPGAAPDYGNGIDYQREFDTGGMELAEGEPRA
LGFNPLAGTPTVFADGSVALNGEQEFQHRTGVASPSQRMGLDARTGSLSAAAVQAVDSGAHAQMQQAAAQ
VQAAQEAKRAKPTQKKEQEPQAMPDVDPQTGEIAQGPGMAAWSDADLSTAFRGAQSRDVRLQLAKEMQRR
REQRALQAELDAEQSGTVPGADGTDTAFASVTEDAGALPARAATTTEGQMNGAQADQAQQAAAQPPQGRA
APAGQPAARGLSDGAPAQDVGAQAAPAAGPQAQAQGGEVEALRQKLRDVEARIIAAAPGAMGQGGGDIEA
AMKSRKVPVTLKAQRKKLVDQVRTAQATEVKTFAPETGTLGIPRADMPQVPSQSHGGLVKHLNAQGIAHE
IMTVDAAELKPTQAEYSPAKVEAAKTAGGDRAVIVSNDGHIIDGHHQAMAAAQEGKPVKAIVLDAPVDQA
LEAVKASPSAQASKPETPDYEAQVAEMLDPASPRTSVTIAAGHEVPESVYRAQTSLRAAPGYTMKPGKDG
TVILTSTGKKSETSRKASNGEPPASPSARIEDFGETLRGARKMLYAEAYADGMAKAKELDAKAHPLSKTW
PDPDYAKLLEGGAAPEAVALVRALRDAVPTKPQSSWKLKGWTQKMQALRGFAEDILAGRAEAAAVTRELE
RAGISDVANQAALYEAVGHDRSLKGVILSKGLYSMYDGVRHDPPRTIWTVAREAKASALGNWPRELAKGD
TREAAIAAFKQRAAELLAEEQAPARGATFEIYGKRAGGARAFFIGKKIGRNVAELKGGFADLKTARQYKA
DHQAELEDLLAKYKAVPPVRNAQNAPRIGQDYRKGADVTPEQFQEAFGFRGVQFGNYVEGGRRQHDLNRA
YDALMDLAGVLELPPRALSLGGRLGLAFGARGSGGVDAAAAHYERGEVVINLTKRQGAGSLAHEWWHGLD
NYFSRQRGDGVGMMTEESRRGDGVREEMRAAFRDVVSAINRTGMQERSRKLDDRRTKEYWTTKPEMSARA
FESYVIAKLQDQSAGNDYLANVVGDGAFALEGAYPYPTAGELPQIREAFDAFFQTVETRRGEDGAEVLFR
RDAAAPFDYDAMQRVVLGKAPGFSAVAREQAVSSVRGTVDVIRAAWGSNAPEVVVAFDMQDTAVPEAARQ
ADLRQRSGGARGAPEGFYYRGKAYLMASRLNTPADATRVLLHEVLGHHGLRGKFGKDLDNILNQIATMRK
DEVAAKVQEYGLRGVQGLNVREAAEEVLAEMAEKNPQLHFVRRAVAAIRNWLRAHVPGFKNLRLTDDDII
QAYILPARGWVERGGREQAAGGPHDRVVNFARHPGFSAAVDAAVKAGTMGETGGRAHIEIGTLSPALAAA
GIPAGDLKTSAKVLQKVVFDHGVPPSVVKRIPELLERPVMVFHSATVEGSFVAVTSEMVRGAPLIVAISP
ETTTGGVSLNFVPSLYPRDDLQAIQRWLNATKPGEQLLTYLDKEQSPAWFGSTRLQLPGEFRTTQGLQSR
NIATQADVVNAAGGEGDIPMFSRSRMAELKDGALAQIDAALSHPGKVSLWDKTVGTMRHLAERAPAFKPV
FESAQRQIDDVAMLANDAADVAPRLLPRVDKLRDLAKRPISAEDNKAVARPLFEGTLLWGRDLDGQPALA
DDLQKKYANLGADEKAQLLLRAGRIDPGVLAMWRGMPLAQFEAAVSSRFESKVIKAGVVWEPRELRAMFG
LNDQQMGLYQEARGAIDRSIDMTARADMLRSLGEKYTPMRAATLEAPSLTDALTLLVETLEQEAQATPDA
REHLADLMHGLRQRYDKARELMAQGYAPLSRFGRYTLDVVDARGERLYFGMYESMADSNRAKIQMASAFP
GATVSQGTMSAEAYKLFAGITPESLELFGNMLGLDAEGNKAQDKAFQQYLQLTKNNHSALKRLIHRKGIA
GYSDDVGRVLASFIYSNARQAAAGLNAGVMDSAINAIPKEQGELRDVAMGLRSYIQDPQEEGQAVRGMLF
AQYLGGSVASAFVNTTQPFAVTLPWLSQFGGMKKAGTQLARALKDMGTRGFQYQSDLAHALKQAEDDGIV
SPQEIHQLMAQARGAGALRVGDGTRRGNARAAAANAWERTKVAWGQPFALAEQFNRRSTFIAAYRLAQQQ
GMDKPAEFARRAVLETQFLYSKANKPRWARGAVGGTLFTFKTYSVSYLELMQRMWTQGGPEGKRAVGWAV
AMLLLMSGAGGLPFMEDLEDLIDGAGQLMGYNVSAKQWRKQVLRDVLGKELADFVEQGVSGLPGAPVDVS
GRLGMGNLIPGTGLLMTKQSRERDLLEVAGPAGDLVARGFSGARKLITGDVAGAALEVAPTAVRNAAKGA
DMASSGMYKDTKGYKVIDTTLDEALAKAIGFQPRSVAEVQEANSFMQRSKSFYTQTSSDIKAQWAQALFE
KDGAALERVRRRLEAWNRDNPEQRIVVRMPDVWKRVREMGKDRTQRIAAAAPKALRQQMREMAREAG
>gi|319762398|ref|YP_004126335.1| hypothetical protein Alide_1692 [Alicycliphilus denitrificans BC]
MANKFYPKGAEKILSAQVNFLTHTISAVLVPSSYTYSDSHEFLSDLGTVVGSAVDLAAKSITGGVFDADD
PAFGALAPGNTAKALALFRNTGSAATSPLLCYLDEITGFPFSTNGGDVTVPWSNGPFKILSLV
>gi|319762399|ref|YP_004126336.1| hypothetical protein Alide_1693 [Alicycliphilus denitrificans BC]
MAERFSDNAVGTLADGIDDASTTITLADEPWAANFAAISQGDFQRATITHSDYPQLYEIVRIIESDGLIL
TVERGTEGTAAHGWAAGSKVSARVTAEMLQSFAPRLGIEDDPQAQYGRQFRTTTNNGQFVMNGRASASYK
AVQISGVHALQPVAAAVRTNSLDDGYIDMNMTRESVGATAFVHLGDGIPGTWTAGNYYSEGSLVKPPTAT
GYHYALEMFPGKDYSDTTTQPNFDTYGSCPMALDSNDEEVGVWVAVPDPLAIVESLPGGTRIMVSEVGFI
CYEYGATTAPSVSIGADDDPTLFANDIALSQIAGEHQVHRISVTAGGSMHHKLRFRLETPAEGTFRGRFY
WRGLIVGL
>gi|319762400|ref|YP_004126337.1| hypothetical protein Alide_1694 [Alicycliphilus denitrificans BC]
MSYPLINGAPINDGDGGGQTRSLRPVQFGAPSLRLVAASLRPVRFGVPSVKYGTDLVARASSLRSARFGD
HTVVRGMPPSATVFHAGSMRPAHFGIPEFQSSMSAGPAQSLRPSAFGHPSLRAAQPVSGLRPVRFGVPGL
AIAAGVAPLRAARLGVPALSLRFGASSLRRVRFGVPGLDIAGMSYPAASLRTVNFGTPALGGVVLRARAL
CPVRFGVPGMDRGASC
>gi|319762401|ref|YP_004126338.1| hypothetical protein Alide_1695 [Alicycliphilus denitrificans BC]
MLTFESFTGINNVLPERRLKGNDLLVARDVDIGLTGEVSRRGGFTQESDQCHKNMHQARGFLLATCGSVL
TAIHPDGARHVIHPALGPERVWYCDLPDGRTTYTNGLIHGVTDGVAGVERSVPAPASLGAPDVAFGALHP
GQYRYHLAHVRMSDRLEGPAISSGPVTIGQGGLRLDGLPELDGHVVNVYLSGQDGEGAYLAGVATGGSFE
YAGSNAALVLPCRTLGAQPFPVGTITAFWRGRVLVAQGDVLWASRPNAPHLADWRDFRQMPAPITAIQPV
DDGIYVGTTQDLIWLGGATFDGLAYAPTRRGPVVPGSGVAAPGDRIKLGDGSGAGTAMLCIAGGEVVAGF
SGGQTTSLTGDRYRTKATEVCAAFREVDGIPQYLAVPQ
>gi|319762402|ref|YP_004126339.1| hypothetical protein Alide_1696 [Alicycliphilus denitrificans BC]
MSLWNPYTFTIGGAPALLDAAPPALRVMGGGQASAEQLAAARMAFSRFCAVARTSPVPNPTETGRLPDGS
AYRIVVVGAQALMELHPVVGGKPLSDEVRPGIWFLDPAPGEPGAGNAFFVLSPPGEGLEQWTLARLTGWP
ALPVAGRAGPRVSMATAKIMTTGIRAPEPAEYFYPNGGARLQQLGGYVSMTINAVGESAPSFVGFDENHR
AMFLSGGVLSRDGLYLYRSSTSVNLDKTGAEGSGIKPQYEEPPTYPAISLTLVSEIYQPAVSTWAESNGR
QLLAVASNGRRIATLFTRQFDRLPPFAGDQYTIVKGGGLMEAYTTDVSYKGTTYVRVDARTLPGVISGAL
TYRGVEADLKVFDTRTGEAVVAQREPSDSFVPGTPVLMWWDATSEAGAYSKSTGFGVGVDYSAPVFVLTS
YSLTGTPGSYREDCTFALDGEVSHSAQGSQTTHEILGPFFSGSELLPLIAKTEKSYESSFRGHASGSIKG
FGLRGGDTPPQRPEFVDEATFDAAIHTYEVSGTHAMEYKRTKNVQVGRFGELRLIDERTTETADLYWRRF
IDAWTGAPESSTGNSSSAYAWSVTRRALLVFDPELDLLCYSEFGFSGSGSAAYERTGVGDDDVTYYLSPG
EPLPDLPRVRIVLRCGGETKYFDTAVAEASHDYSHRVAAAQLHPMLGYPYGAPAVHTADYLEDHNAIGTS
GMWTVPMVAISDAIRAFADGTPVTTALMDGVPVFGYFWRPSPNAFVAQCSTRGSFPEPSRFLEAVQATYV
RSPDGRGAYLRLQCNPSIPETVRGFAPQTFVVDMRGLHTSPTTAQLASAGVDLSMAGAF
>gi|319762403|ref|YP_004126340.1| hypothetical protein Alide_1697 [Alicycliphilus denitrificans BC]
MIVVNTLTGAVSEYTRHDFQSITPTHGGSATGLYAFDGDTDNGLPIVSEIRLPATLRESTLKQSIQMAYL
SMRGDGSACFTVHGAREVWRYSFPLRPSEQTRCPVGRGIRENYLGFGLSNPAGQAFTLDRVEILAAASKS
RRV
>gi|319762404|ref|YP_004126341.1| hypothetical protein Alide_1698 [Alicycliphilus denitrificans BC]
MADMDLNGPAEIVEDKYERSVELAETASREVADFQRALNDSIYQPPQISVQWQTMAAPSLPAIPNMPALP
GIDFTEPGGQPGGLTATMRDVAIDDLNIQMPTLDFGQAPVLTIGQAPALPEVRDVAIPDAPDITLPDAPQ
FLALQTHSFGGVNLHEEWLDKLDDIPELSILQPTPFQYSPGARYASQLLDNLKATLNARIQGGSGIVPAV
EQQIWDRARDRETQIALAREQEVLRGAEALGFPLPSGVLAGQLADARREYHDKLSGLSRDIAIKQAELEQ
QNMRDSIQAALQLESTLLEDCYKLEMLAFEAAKTAADNAIAAHNAALEHFKALLAGYQAYAAAYDTVVKA
ELSKVEVFKALLSAEETKASINKSLVDRYKAEIEGGMAAVEIYKARVGAAQTLVELERARIQAGGEQVRA
FVATVNAETAKAEMYKTRVSAEATKVEAVGAVARAYGSKVGAQAEKARVEVAKFQALVSAKGLEWDGWKA
RLQAAVSRMDAAARTSSIVVDGYRLGAHAAEAQAQSVMRQWEASIKQYEASKDLTFRVASANAQAVMHAN
DARMEAAKVMLATGMQKVASSWSAVSASASISGNVTQSITG
>gi|319762405|ref|YP_004126342.1| hypothetical protein Alide_1699 [Alicycliphilus denitrificans BC]
MTTPAVLSIVLYQGTTQRVPMVRRYVPYKIKGSECDGYVNACTGEPVPPGDFVDEDYAGCTARMQLRSDV
FSTKVLLELTTEGGGIELAGNTLTLVFQPEDTQGLRFDEAVGHVEVVRPNGDVERQYEITVQFSPEGTR
>gi|319762406|ref|YP_004126343.1| hypothetical protein Alide_1700 [Alicycliphilus denitrificans BC]
MSQTVVVTAPGGTAIVNAGGGSVVTSVPSTVVVEHESTPETIVVTRGIPGPRGPQGIPGPAGGAAFVRQA
DAPLSALCVVWEDAAGVVRPADYDDMDHVYLISGLTLTATPSAGDVTVQRSGPVDDASWNWAPGPVYLGT
GGALTQAPPVDGFDILIGYAVSPTRLYLDIQDPISLED
>gi|319762407|ref|YP_004126344.1| hypothetical protein Alide_1701 [Alicycliphilus denitrificans BC]
MAQRFLARISGKTKQMEAKAASAGAGDAGKIPALGPDGKLDMSMMPAGIGADTQIIPASEALSAGNFVNI
WSDAGAAKVRLADNSNGRPADGYVLDAVSSAADATVYPLDGTNSELTGLAPGAEYWLGTAGGVTNTPLDE
TDAGNANKISQYLGKAKSATELITVDDGYVVL
>gi|319762408|ref|YP_004126345.1| hypothetical protein Alide_1702 [Alicycliphilus denitrificans BC]
MAIRRPLVRVGGRVQQLPPGDSLPGAEGSALTGDLAYSVDPARYALPDWLPCDGALVDNADAPESLQPYM
ARASGVDFSAGGTIESTSAAPQGVFDMLGDYALMQMGASPYAIPLKKNDVGYSYLRESFGANPSAALKCA
ALGMTTVNFPCVLGFTTSAGGAFFARGISSTWSVSNVASLFTGKTVAGVVFCADGRFYLLSSTAPYLHSV
QSDVNVASSLVDVGGVGANGAGLCISPNKRYMVSWHNTTPYIYVLEFDGTKYVPLGSPPISTSGTSTFNR
VEVSDTGVIVARTGSGSVFYVCSVTPTGAVGSMVQTTVNTASAWGLMPDGRHLLTWVSNAANYYPIANDT
IGAGTALSMYSTGIYGTLYGRFGLIPGRLLAASSAAGSGYAMVGEVTPSGWIAPRIRYGFLKA
>gi|319762409|ref|YP_004126346.1| hypothetical protein Alide_1703 [Alicycliphilus denitrificans BC]
MKTETLDSIGAAGNKVTIVGASLSGAGWLTASEFAAIVGALVAIAGVVITWYYKRQANRRLAAEHALRQQ
ERQMRIDLMRATGLPQVPCGDTDIGRLEFDE
>gi|319762410|ref|YP_004126347.1| phage lysozyme [Alicycliphilus denitrificans BC]
MSTASRSGIQPKVIWVAALGGFVTLLSPALIDHLQKWESGKSRALVVYEDKLAGNIPTVCNGLTRHVTRT
PIVVGERWTEDKCIAEEAAAIERVQRALLPCFKRLPQPSVLDMASSHAWNFGASATCGSGAMVAWNRGEW
ERGCQRISRGGDGRLVWSFTSRIDPRTGQKVYTFVQGLANRRADETAKCMGGLT
>gi|319762411|ref|YP_004126348.1| hypothetical protein Alide_1705 [Alicycliphilus denitrificans BC]
MKHILIALVAVALVGCTMVPAGTAHRACELLQIASSEADLAPSWYLGAGEVLERCGQPSARAAGEVRACY
ASARNGYSDNKECEALE
>gi|319762412|ref|YP_004126349.1| hypothetical protein Alide_1706 [Alicycliphilus denitrificans BC]
MAVTLITHLIVAFVAAAGAWAFQGARMDAAVAEVRLEQTNERLRAVSQARADERAITKTYQEALNAARTR
ENALRRDRDAARAESDGLRDQLSDAARRIADAPPTAVAEYAAAVSELLAVCSRERTAFAAAADGHAADVR
TLTAAWPVMTTPTAR
>gi|319762413|ref|YP_004126350.1| uncharacterized protein family upf0150 [Alicycliphilus denitrificans BC]
MLYPIYVHKDADSAYGAIFPDFPGCFAAADDLQGLPRAAQEAAEAHFGADDDPIPAPTSPEAWAADPDYS
GGFWMLVEIDLSKVRAKAVRLNISLNESLLQRIDLAAKARGQSRSAFLATAAEHEMTGAA
>gi|319762414|ref|YP_004126351.1| ycfa family protein [Alicycliphilus denitrificans BC]
MNSAALIKQIKADGWVLVRTVGSHHQFKHPTKPGKVTVPHPKKDLPLPTVRSILKQAGLR
>gi|319762415|ref|YP_004126352.1| hypothetical protein Alide_1709 [Alicycliphilus denitrificans BC]
MQIDQIAIAVLGALAAWLSQARSAQARRWAPVFGMLGQPFWFYAAWEAGQWGIFAVSVLYALAWMRGLWV
YWIAPRPADGVGRLATIQLSPDRKRS
>gi|319762416|ref|YP_004126353.1| hypothetical protein Alide_1710 [Alicycliphilus denitrificans BC]
MILALHIDKDEPGHYTARVLDCRAEVDEFAASTIAAAIREAAVRGYDAKGFHIWYGHVCIGTTSAYAMRH
DGETLALRLVRLHAEF
>gi|319762417|ref|YP_004126354.1| hypothetical protein Alide_1711 [Alicycliphilus denitrificans BC]
MTGKHHNWHKAWRRDGPKLIHDSGLAVEYNNDMGWSSTDDTTEAWSAFELARGVPLHDLQARLGRLLREA
AEWDQRNP
>gi|319762418|ref|YP_004126355.1| hypothetical protein Alide_1712 [Alicycliphilus denitrificans BC]
MTNRLQLAIDAATAKHQAGADVADIVAAAHAVLSASGEFGKGLDRSVRRVVRNVTGLDLEPGQGHGNRRA
DGAINYRG
>gi|319762419|ref|YP_004126356.1| transposase is4 family protein [Alicycliphilus denitrificans BC]
MKQSSLGLSNTTKRTRKREFLDAMELVVPWAELVSLIEPYAPESGRRGQQPFAVQTLLRIHFMQQWFKLS
DPAMEEALHDVPAFRDFAGLSHWDEHIPSESSILRFRHLLERHKLADQILATVNALLQAKGLQLKAGTVV
DATLIAAPSSTKNQSHERDPEMHQSKKGNQWYFGMKAHIGVDADSGLVHTVRGTSGNVGDVVEANSLLHG
QETDAFGDAGYQGVDKRADAKPTVRWHVAMRPGLRRALDKDRPLEALIDQLERTKASIRAKVEHPFRVLK
QQFGYVKVRYRGLKKNTAQIVTLFALSNLWMARHKLLQCMGQVRAHRA
>gi|319762420|ref|YP_004126357.1| hypothetical protein Alide_1717 [Alicycliphilus denitrificans BC]
MIKLALTLLCLLGLSTSALALEFREIPNSGEILATGRVERGDAEKIARIITLEYKQRHHLVRHLVTLSLD
SPGGSLLGGLQLGYAIRQLGVHTNIGAGQSCMSACALAFLAGQERTVEGRFGVHAVSFDPNAKHADRNDQ
LDSIQQLGAITTAYVSEMTGKSDVALKALSTSAASISILNDAELVSMGVITIARRPSQFGRPGFKCPAEQ
NFTVLSAVCAHIDISLLDQELNTLYSKIQKGGAPSDLAEEQERWRRYRNSCINDRQPNGYASIVNCVRES
YTVRRDQLMSVWLAMSAKKSRPGSENWQPIEPTR
>gi|319762421|ref|YP_004126358.1| istb domain protein ATP-binding protein [Alicycliphilus denitrificans BC]
MSAEIISALKAMKLHGMAANYPEVAAQARHTDFTPEAFLNQLLKAETAERAVRSMAYQMGAARFPAHRDL
AGFEFAQANVDEALVRSLHTAKFIEAAHNAVLIGGPGTGKTHLATAVGIEAIQRHSKRVRFFSTVELVNA
LELEKAQGKAGQIAHRLMYTDLVVLDELGYLPFSQAGGALLFHLLSKLYEHTSVMITTNLSFGEWSQVFG
DAKMTTALLDRFTHHCHIVETGNDSWRFKNSSATTTSAAKTRGRKAPTKGEAIPSALDLSTTE
>gi|319762422|ref|YP_004126359.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MGTLAKIRRLHLREGVPIKEIERRTGIARNTIKSWLRRGQMVEPKYPARVMATKLDGFTEQLVIWLKADA
HRGKRDRRTVKLMYEELAAQGYQGGYGRVAAFARRWRESQAANANKAAFVPLKFALGEAFQFDWSTEYAF
VGGLRRRLEVAHTKLCASRAFWLVAYPTQSHEMLFDAHARAFAAFGGVPQRGIYDNMKTAVDKVGLGKRR
VINARFEAMTGHYLFEPEFCNVASGWEKGIVEKNVRDRRTSIWHKAVKLRWDSMETLNTWLGEQCRAAWA
ELNHPEWPALKVADMLQDEQLRLMPNPKPFDGYVEVPARVSSTALVHLQRNRYSVPSEHAHEVVSLRLYP
DRLEIVAENVRVASHVRSFERSQTFYDWRHYVTLIERKPGALRNGAPFETLPEPLRKLQAILLRHEGGDR
VMAQVLAAVPVHGLDAVLVAAQLALEAGKPSGEHVLNVLARLKAPGDGACLEVASTPLKLAVEPLANVQR
YDRLRGAAGETAR
>gi|319762423|ref|YP_004126360.1| hypothetical protein Alide_1720 [Alicycliphilus denitrificans BC]
MSSDFHILADAADDDSLDNHRNAPRPDPACLYGLVGDVARAGSETTEANPFAIAANFIAFMSCAVGRGPY
MAVGNTWHHARQFMLHIGRSGRGRKGDAASLVSRIERSLNALSPDATPKVHRGGLSSREGLVYLIHDGYT
EGQKEVEPVLDKRLLVIESEFANVLHQSKREGNTLSAALRDCWDGVSMKPATKTSRLWATDPHIALIGAV
TPSELLALMASRELTNGFANRFLMIWAERPKMLAFPRATRQEEVDALAERVHAVLTFCKAERWAEKDHMC
VELSHEARQRYEFLYHSELNDDRAGERITALIERRAPMLLRLAMLFALCDLTSTVEVRHIDAALAWVRYS
VESVKFIFASAADEAKAAETTETAQEITAFLAERGQATRSALSKDCFKGHKTKAVLDAAIDELLACNPPC
IVVETVARPKGVTGTPIKIYRLAAKSAKCAKREEPRGIAGDSAVRNARETCETSPDDDASIRTVRTVLIS
EQI
>gi|319762424|ref|YP_004126361.1| hypothetical protein Alide_1721 [Alicycliphilus denitrificans BC]
MIARNTTNEFLGAIQASLGYAPQYLEPGRFCRFGPRKSGWAKLFPDCLGGVYGDYRQNLSSHWNARQPQH
QSPVELAAMRYHVQLAAREREAEQRAQWAKNAERNSALWAASIPADGAVRSYLAARGLAHWPIPPCIRQH
PALAYWHSDEDGELHMLGHYPTMLAPIVSGGKLLAIHRTYLGDGCKADVPTPKKLTAASGPLAGACIPLA
VPRGGVLGIAEGIETAAAASLGSGLPVVAAYCANALASFSFPRGIERLVIFADHDPAGQQAAATLAQRAT
RAGLIHKTLTPSKPGSDWADVWLEGTQ
>gi|319762425|ref|YP_004126362.1| hypothetical protein Alide_1722 [Alicycliphilus denitrificans BC]
MQAIHSIEARDQATAPKFIPLAHENRPAVDTAAAAYYLGRRPQTLRGWACMENGPIRPIRINGRLAWPVA
ELRRVLGVA
>gi|319762426|ref|YP_004126363.1| hypothetical protein Alide_1723 [Alicycliphilus denitrificans BC]
MKNRKDTKHELLAPPATQATHESQSTAFDLDREVIAARSHGGMTRNDVAQGMAAPQEAMTEQEAAEHEIA
WFDATLDAAGFFALEHVPPIQAAMLLCGFCPHDSTESEAENCATDYTSPEDFKRLRLTFVSINKPARCSL
LDWMAIAAGAGRAVHPWAQRYAKLRGLCNPAESPPTPVVAGGSSNAPLPLTTSDIAFCFDGLRWSEKEWR
TPLGNKPKWLQSCVVIPGQRGVSQTRWNPVLIAAWLFSNGYVQAKSARARFQTKPQLKPWLDAWKTYEAD
NFDTP
>gi|319762427|ref|YP_004126364.1| integrase family protein [Alicycliphilus denitrificans BC]
MSGQQSRVRLTAGRVADFTCPPGKSQAFLWDTDTPALMLRATPTGRKTYAFEARLNGSTIRVSIGTAAEW
TLEAARTKAQALKMMVDSGTDPRVVERQQQAEREAQQTAAAVKAVTVGEAWTVYLADRRQHWGDRHYQDH
EKLACAGGEVAKRGTRGRGVTIAGPLHPLMAMRLQELTAPVIEAWATNEAKTRPTPARLSWRLLRAFLAW
CAEHPQYAAVVPAQNPAKTRRAREALGKAGIKQDALLKEQLPAWFAAVRNIGNPAISAYLQTLLLTGARP
GEVLAMHWEDINTQWRGLTIRDKVEGRRVIPLTPYVHQLLTALPRRSEWVFASTVQEPGKPSQPIAKPHR
AHATACKVAGIDGLTFHGLRRSFKSLTEWLEIPAGVVAQIQGHKPSATAEKHYTVRPLDLLRVHHERIEA
WILEQAGVVFDAKTPPRAIRLVAKQ
>gi|319762428|ref|YP_004126365.1| abc-type nitrate/sulfonate/bicarbonate transporter periplasmic ligand binding subunit [Alicycliphilus denitrificans BC]
MFPLSVTRRQLGRLGILSAAALGVPALLRAQSRPGAAMPVRIAVGGQAGLYYLPLTVALGLGFFRDEGLD
VRVMDYPGGGLALQALHGRVADVCCGAFEHVVRQQLRGVAYRSLAVLGRAPQLALVASARHWPLKDIAGF
RGLRVGVTALDSSTQFLASLWLNQSGVPLDTVRFVGVGSGMGALTALRQGRVHALCHSDPLITMLEQRGE
VRLLADTRTLKGTVEMFGGAMPGACLYAPQDYVQSHPAEVQALVNALVHALKWLQTASPTDLARVVPPSY
LLGDRARYMAAFYKVRETLSPDGMMPEDGPVTAVRAVARLQPESAAAAARVALDKTFSNNWVRKAKQKFQ
L
>gi|319762429|ref|YP_004126366.1| hypothetical protein Alide_1726 [Alicycliphilus denitrificans BC]
MSLHLSIGPLVSLIAGILILIMPKLLNVIVALYLIVIGVLGLMGMHTLRL
>gi|319762430|ref|YP_004126367.1| lytic transglycosylase catalytic [Alicycliphilus denitrificans BC]
MKILHILWLASLLWLTGCATTSTPSATTSSDTSQASTGATAVYPSGPLSPITASTAKGRAVAGIDAPSDL
WDRIRRGFAMPDLDTDLVRDREQWYATRPDYMQRMTERSSKYLFHIVEELERRGMPTELALLPYIESAFN
PQAVSSAKAAGMWQFMPATGSYFDLKQNAFRDDRRDVLASTRAALDYLQKLYGMFGDWHLALAAYNWGEG
SVARAIARNEKQGLDTGYTNLSMPAETRMYVPKLQAVKNIVADPVRFSTELPLIENHPYFQSVEITRDID
VSLVANLAGIREEDFRALNPSLHRPVILAAGMPQILLPWDNAQVFRRNLEAYNEGQYASWTVWTVPSTMS
VSAAAQRAGMSESELRQLNGIPPRMMIKAGSALMVPRAATTRADVSSHVADNGQIAFTPEIVTRRTTVRA
GKRDTVASIARRYKVSAADVADWNDLKASSSFKAGERVVMYLPMRLTATALSHSPGKRQAGKAIAQTAKA
SPARKGGTPAKRKR
>gi|319762431|ref|YP_004126368.1| hydroxyacylglutathione hydrolase [Alicycliphilus denitrificans BC]
MLPLPAFSDNYIWMLHDARHALVVDPGDAAPVLQALHGMGLSLRTILVTHHHGDHVGGVNALREATGAAI
YGPAGEAMPEPITRLRHGEAVTALGLRFAVIDVPGHTAGHIAYYCADVDGAPLLFCGDTLFSGGCGRLFE
GTPAQMQASLDTLAALPGDTRVCCAHEYTLSNLKFARAVEPGNQALLQYLGHCESLRQAGRPTLPSRMDT
ERAINPFLRTREATVAQAAHGFDAHVDPREPATVLAALRQWKNEFR
>gi|319762432|ref|YP_004126369.1| methyltransferase type 11 [Alicycliphilus denitrificans BC]
MSGEIIGLHHWFGSPPGRYLLAWEQERYDELVADIFGYHALQLGMPGLQGLRANRMPHRWLALGGEEARL
LPREASPAEAPAVALLAEAVALPFAEGSLDLVAMPHTLELSVDPHAALREVYRVLVPEGRAVISGLNPLS
LWGLRQWRARLYQRCGGGGQLYLPDVGEFITPGRLRDWLRLLGFELESISFGCYRPAAASERWLEHYGWM
DGLGARWWPILGAAYVIVAAKRVQGMRLLEPSWRKAPKAAAAQVQVARRH
>gi|319762433|ref|YP_004126370.1| ribonuclease h [Alicycliphilus denitrificans BC]
MNQVVIYTDGACKGNPGPGGWGVVLRSGELEKELFGGELGTTNNRMELMAVIQALAALKRPCQVALYLDS
QYVRQGITEWIHGWKKKGWRTAAGQPVKNVELWQRLDELAHKAGHRIEWHWVKGHAGDPGNERADALANK
GVEQALGQ
>gi|319762434|ref|YP_004126371.1| aminotransferase class i and ii [Alicycliphilus denitrificans BC]
MNASVHALNRFLAQAKPSATYKVMDRVAARRSAGAQVISLCAGEPDFDTPGHVREAGIAAIRAGHTRYTQ
VAGLRALREAIAAKFQRENGLELDWRGTLVCSGGKQAIFNALAATLNEGDEVIMPAPYWVSYPEIVQLCG
GKAITVACNAGNGFKLTPAALQAAITPRTRWLILNSPSNPTGAVYSRAELQALAEVLLAHPHVLVLSDDI
YEHLIFDGLAFFTIAQVEPRLRERVLTMNGVSKAYAMTGWRIGFCTGPGWLIEAMEKLQGQQTSGACTIS
QHAALAALTGPQDFIQQSRTAFQRRRDMVVESLNQAPGLHCEVPQGAFYAFASCEGLIGKTTPGGTQLDT
DEAVTTALLGEAGVAAVHGSAFGLGPYLRVAYAVDDAALRGACEAIRHFCTRLAD
>gi|319762435|ref|YP_004126372.1| dimethylmenaquinone methyltransferase [Alicycliphilus denitrificans BC]
MAYSAAQLEQARKLGTSTLFEASGLATGAANAAIRPVWAGASIAGPAYPLECSPGDNLAIHIAMEKAPRG
SILVISTGGFVAGYWGEVLTVAAEAAGIAGLVIDGGVRDVAALTSRRFAVFTRGISMRGTIKTSAPSVGQ
PISLTGTPVAPGDLVVADDDGVLVIPAAHVEHALANGQARADKEARMMEALAQGKSTLELMGLTSWRQAR
>gi|319762436|ref|YP_004126373.1| dimethylmenaquinone methyltransferase [Alicycliphilus denitrificans BC]
MNRHMHAQDQELVALFDGLDTPGVSDAMDKLGLHGQALGIMPLANYARAVAGPAFTVKYVPSSNPPGTVG
DFIDDVAPGDVIVIDNDGRTDCTVWGDIMTQYAGLRGIAATVIDGVCRDVGKALGDGYPMFTAGRFMRTG
KDRVQVETVNGTVAIGTVRVAARDIVVADANGVVVVPRGHAREVAETARRIEETESRIREQIVQGKTLGE
ARAALGYHKLQAKE
>gi|319762437|ref|YP_004126374.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MSTIDFRLIRQLWMFLAVAEEQNFGRAAARLAMSQPPLTEQIKVLEHSLRLQLFERSRRGTQLSPAGAAI
LPAVRQFARQVEHLERVVREVAAGQSGVLHVGAITSAMLDTVPPLLDHLRRTHPRLTVFVREIDSVDAIS
GLEAGELDLAFVRIDGEVSSGGIAVLPLMEDRLAVATSHDHALAAQPRVRLKSLAEEQWVMPARQVAPAY
FDLLVNICRTQGFSPRVLHEVRSVTSQIAYVGCGQGVALVPASMRKLAPANVVVRPLKEKVMVITAAAAW
NTRRHHPMVDEAVDWLRAQGRQGRTPRP
>gi|319762438|ref|YP_004126375.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC]
MKKYLAACALVAQGFLHVPVQAQTLEKIKASGAVTMGVRDSSIPLSYAGADGAPIGFHVDICRKVLEDVQ
AQLGLARLETRYQLVTSQNRIPLVANGTIDIECGSTTNTQARQKEVAFALTTYVEEVRLAVRADSGIRSV
RDLAGKVVVATTGTTSVQHLRRKVRELGLELKDVSLGKDHADSFLLLESGRADAWVLDQGVLRASIANAR
QSSAFSVVGEVLNAEPIAIMVRKDDPGFKRAVDVTIRKLLASGEMQVLWKKWFQAPIPPRGVALDMAPPE
SLQRLWAHPSDLPMETFQAP
>gi|319762439|ref|YP_004126376.1| dimethylmenaquinone methyltransferase [Alicycliphilus denitrificans BC]
MTDTAHVEAHLARLQALDSNTVSDALDFFGLPGATFGIRPLWNCPRIVGRASTLQFAPKTGGGATVHPIT
PVIAASKGCDRILVIAGGLEGISCWGDIVANAAKAKGIRGTVIDGCSRDIEGSEAIGYPVYGRGITMISA
RNRAVQVSSGEPVTMAGVRVAQDDYVIADRCGTVFVPAACIGEVLDLGERIARRQDGMVQAVIAGRSVEE
VMHDKEFEAIAVSQK
>gi|319762440|ref|YP_004126377.1| tricarboxylate binding receptor [Alicycliphilus denitrificans BC]
MCPRRISLACALLAAAASGAAFAQASAAFSCKIVKFVVPYPPGGSSDLLARMLVPGMNKLLDTTVVVENK
AGAVGNIGTAQVSAAESDGCTWLLGNSSNIVVSRNLYKLTHDPVEYLKPVAEAAAVPMVLYVNANLPVKT
FDEFIALLRKNPGKYSYASPGSGSTHQLLTEMMKIEFGLQAEHIPYKGSGPAIQDVIAGHVAFAFEGTSA
IAPHVAGGKVKALATTGAARSNVLSTVPTMKELGHPKFVATNWYGVFVPAKTPDALVARLNAGLRQVVKS
PEIVESLRKLDSRASDLDAAGFARFVQEEIPFWKSLADQTGVKVD
>gi|319762441|ref|YP_004126378.1| hypothetical protein Alide_1738 [Alicycliphilus denitrificans BC]
MTPLAEPDLRRLAAEAAARPRCADCAGLQRPGWESISGATNTAHLECLGPLGTEADWDRLDEYHPHGTNL
WSPDAPIALGWHPYTRCALWRCPRCPRCAGAYLRYTEYGGYYEEERIRPLRSELIASLNPP
>gi|319762442|ref|YP_004126379.1| thioredoxin domain-containing protein [Alicycliphilus denitrificans BC]
MPFAATHLTQPPTREAVDQLQGPAVLEFGTPWCGHCQRAQPLIEQALKDQAGVQHLKVEDGPGRPLGRSY
RVKLWPTLIFLRNGQEAARLVRPQTAREIEEALRGIAP
>gi|319762443|ref|YP_004126380.1| molybdenum cofactor synthesis domain protein [Alicycliphilus denitrificans BC]
MKTIDQIAAELQGYDPQALRAADVNAFLQRLVAPVAEAEEVGIFDALGRVLARDVVSPISVPPHDNSAMD
GYAFDGAQLASGHALLLRPVGPTAFAGAAWTGRVGAGECVKIMTGAIMPAGLDTVVPQELTSAGPDGTIH
IAAGVLRRGDNRRLLGEDLMQGCVALSKGELLTPAAIGLVASLGLKTVTVHRRLRVAYFSTGDEILSLGE
PPREGAVYDSNRYTVFGLLTRLGVQVIDLGVVRDDPALLEAAFRRAAAEADAIITSGGVSVGEADHTRTM
MRQLGDVAFWRIAMRPGRPMAVGRIRSELQGKTASNDHQPSVSSYQNESTHGAAGGSVLFGLPGNPVAVM
VTFLAFVRPALLRMMGCTRAAPPLLRATSAEPMRKKAGRTEYQRGLVTQAADGTLQVRTTGNQGSGVLSS
MVQANGLIVLHHEQGNVAAGDMVDVMMFDGVI
>gi|319762444|ref|YP_004126381.1| gcn5-related n-acetyltransferase [Alicycliphilus denitrificans BC]
MTREPAAAPRITVLAAAHAPAYKALRDEALRCAPEAFTSDYATAVQRPAQSYAPRLSMPADEGFFLGAWD
ADGALLGSIGCQREERAQQRHMATVVAMMVAPQAQRRGIGRQLLRACLAQAERMAGLEQLVLTVTAGNAH
AVRLYQRAGFTPYGLLPRAIVVAGVGHDKLHMLRLLPSSPLWQPIAPHEDH
>gi|319762445|ref|YP_004126382.1| molybdopterin-guanine dinucleotide biosynthesis protein a [Alicycliphilus denitrificans BC]
MIDTHDITGLILAGGRGSRMGGVDKGLQNFRGMPLALHALMRLSPQVGSVMINANRNLSAYESFGMPVWP
DGLADYAGPLAGFLCGLERCETPWLLTVPCDTPLFPADLASRLAAAAAIQGADIAMASAPEQEDDGSTRV
RTQPVFCLLRVSLLESLMRFTQEGGRKIDRWTAQHPCAIVAFDQPGDDPLAFRNANTLAELHALEGQGSP
>gi|319762446|ref|YP_004126383.1| molybdenum cofactor biosynthesis protein a [Alicycliphilus denitrificans BC]
MGHNLAMAERVIPLVDHRSRPLRPAVPATAAAAAMPATGELYDTRARPLRDLRISVTDRCNFRCSYCMPK
EVFDKHYRYLPHSDLLSFEEITRLARLFMAHGVHKIRLTGGEPLLRKDLELLVEQLAGLRTTEGRVPDLT
LTTNGSLLARKARALKAAGLQRVTVSLDSLDDAVFRRMNDVDFPVAEVLAGIEAAQAAGFGTIKVNMVVK
RGTNDHEILRMARHFRGTGITLRFIEFMDVGATNGWRMDQVVPSREVIARLQSELPLVPLSPTAVGETAQ
RWGYAGADGRHDPSLGEVGVIGSVTQAFCGDCNRARLSMEGRLYLCLFATQGWDLRSLLRSDASDAQISA
AIAHIWQGRGDRYSELRASLPPDQGEERGRRIEMSYIGG
>gi|319762447|ref|YP_004126384.1| hypothetical protein Alide_1744 [Alicycliphilus denitrificans BC]
MAARRAGRKIRPMRDTCFLPVPSSAACRRRDRRLALRVLGTGLLAPALPLSAQARMALATAINRTARFRA
LSQRMAKAYGQLYLNVRPVRARDVLEHTRRQVRSGFEDMAHPGWPPEVARLLADVRRSADRLNALAEQAP
SRSVFQAVSAQADQMLALADTATQALERQAQVPTARLVNTAGRQRMLSQRMAKNYELVAAGLDGRTVREQ
LAGDADEFQRAMARLSEAPISTPAIRSALELGQAQWLFFDAALKRQPDGRGLEEVATTSERLLEVMDGLT
ALYEAALRDLLG
>gi|319762448|ref|YP_004126385.1| hypothetical protein Alide_1745 [Alicycliphilus denitrificans BC]
MPLSPPAPRTARHIRRITYQGFEREDGLWDIEGELHDSKTHDLPSRRNPGRTRRAGEPIHHMWLRVTVDR
NLVVQAIESAMDDHPLAGCPEAQRALQAMVGCSMTRGWRQSIQIHLGGVASCTHLRELLFNLATATFQSV
ESAFQSQGDEPPRHLGQCTGWDFHGQAVKEHYPQFYGHTPQLLKK
>gi|319762449|ref|YP_004126386.1| aldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MQLHYIANAGVASASGRTIAVIDPSDGQPYDEIQRGTAEDIDAAVRAAQQCYDTVWRKLAPAERGRLLQR
LSAKITEHAEELAAIEQRDCGKPTRQARADAAALARYFEFYAGACDKLHGETIPYQDGFSVLTWREPHGV
TGHIVPWNYPMQIFGRCVGAALAAGNVCVVKPAEDACLSLLHVAQLAAEAGFPAGALNIVTGYGHEVGDA
LARHPGIHHISFTGSPKVGTLIQQAAAERHCPVTLELGGKSPQIIFADADLDAAVPVVINAIVQNAGQTC
SAGSRVLIDSLIYEPLLERLGQAFEKLRVGPAAMDLDVGPLIRQTQQQRVWDFLSDAQVAGIPMVAQGVV
VDEAPETGYYQAPTLLRDVPVGHRLAQEEVFGPVLSAMAFQDEDHAVELANATQFGLVAGIWTRDGARQF
RMARRVASGQVFINNYGAGGGVELPFGGVKSSGHGREKGFEALYGFTTLKTVAIRHG
>gi|319762450|ref|YP_004126387.1| v-type h(+)-translocating pyrophosphatase [Alicycliphilus denitrificans BC]
MTEPSALTSPLILALACGLIAVVYGIWARSWILAKDQGNARMQEIAAAIQTGAAAYLARQYKTISLVGIV
LAVLIGVFLDVNTAVGFVIGAVLSGACGFIGMNVSVRANVRTAQAATQGMGPALQVAFRGGAITGMLVVG
LGLLGVTAFAWFLVGNGRLTPTANLPALLNPLIGFAFGSSLISIFARLGGGIFTKGADVGADLVGKVEAG
IPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTLIATMVLGALLVGAAPVAAVAYPLALGAVSIVA
SIIGCFFVKASPGMKNVMPALYRGLAIAGVLSLAAFWFVTAWVVPDNALGGTGAQARLFGACATGLVLTA
ALVWITEFYTGTQYSPVRHIAQASTTGHGTNIIAGLGVSMRSTAWPVLFVCVAIIVSYMLADLYGVAVAA
MSMLSMAGIVVALDAYGPITDNAGGIAEMAELPSSVRDITDPLDAVGNTTKAVTKGYAIGSAGLAALVLF
ADYTHKLESYGQAIRFDLSDPMVIVGLFIGGLIPYLFGAMAMEAVGRAAGSVVVEVRRQFAEIKGIMEGT
AKPEYGRAVDMLTSAAIKEMIVPSLLPVAVPIVVGLALGPKALGGLLMGTIVTGLFVAISMCTGGGAWDN
AKKYIEDGNHGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPLIKIINIVALLIVPLVVKFHAG
>gi|319762451|ref|YP_004126388.1| inorganic diphosphatase [Alicycliphilus denitrificans BC]
MSLNNVKPGKNIPEAFNVVIEIPAESDPVKYEVDKESGAVFVDRFLTTAMYYPCNYGYVPQTLSGDGDPV
DVLVITPYPLHPGVVVPCRALGILKMEDEAGVDGKVLAVPTTKILKMYENWKSVQDVNPMRLKAISHFFE
HYKDLEEGKWVKVLGWEGVDAANKEVLDGVENYKKSL
>gi|319762452|ref|YP_004126389.1| chew domain protein [Alicycliphilus denitrificans BC]
MLSSAAQRSSTGSAAASAAAEFLTFRLGQEEYGIDILRVQEIRSYEQPTRMAHAPEFIKGVIDLRGVIVP
IVDLRLKLHCATAEYTDFTVVIILNVGGTVLGAVVDAVADVVALPADAIKPAPQFQGQVDAAFVRGIATV
DKRMLIVMDIESLLSSAEMGLVQSVAVA
>gi|319762453|ref|YP_004126390.1| chemotaxis sensory transducer [Alicycliphilus denitrificans BC]
MRLSDMRVGVKLGLAFAAMALLNLVLGGLAVVWLGHVNEDTREIANKWLPSVQALGDMRATANRLRASEI
GAVLGSDPQLVPRLREDVAAVGRLLGEAEQRYAPMVAPSEAPLYAEFKNHRDAYLRAQARLMEMVADESR
RAEAAHMLYGESQKTFINMAETIGKLSRASHEGSQAAYAESQQTFGSARGSVIAVLAVVIAAAIALGLWI
TRLVTRPVAHAVQAAREIAQGNLAASLSVHGRDELGQLTQALVDMQANLARVVSDVRANAESVATASAQI
AQGNGDLSARTESQASALQETAASMEQLGATVRQNADNAAQANQLAMSASTVAAQGGEVVSEVVDTMRGI
NDASHKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAEAAKEIKQLITAS
VERVEQGTQLVDKAGETMTEVVGAIRRVTDIVGEISAASSEQSSGVAQVGEAITQMDQATQRNAALVEES
AAAASSLKAQAAQLVQAVAVFRLAQGGGGAIAPRPSPAAAVPAAAPQPRVAAPAPAPKAAPPRKPAAPAP
NAAAPAAQRPRLAVVPKNDDDWESF
>gi|319762454|ref|YP_004126391.1| hypothetical protein Alide_1751 [Alicycliphilus denitrificans BC]
MARPEPLHQPLPAPTYELRVADSPAHIDSAAWDALLARQSHPTPFLRHAYLAALHDSSSATPRTGWAPRF
VTLWQGGVLAAACALYLKSHSYGEYVFDWAWANAYEQHGVPYYPKAVAAVPFTPVPGTRLLARDAAARSA
LLRALVDWCRAQDLSSLHLLFMAQEDVQEAQAQGLMLRHTVQFHWQNAGYRDFDDFLASLSQDKRKKIRQ
ERRKVQEAGVTFRWARGAQITPADWDFFYRCYERTYLEHGNPPYLARDFFARMAAHLPEAWLLFVAERSG
RPIASSLIAISAFPSSAECQKNPEPLVAYGRYWGALERVDCLHFEACYYQPLQWCIAHGVRRFEGGAQGE
HKMARALMPVQATSAHWLAHPAFADAVQRFLEREGEGVAHYLEELHAHSPFRREAGG
>gi|319762455|ref|YP_004126392.1| nad+ synthetase [Alicycliphilus denitrificans BC]
MPLAISIAQLNFVVGDLQGNAQKIIDAARQAYAAGARLLLTPELAICGYAAEDLFLRPAFLAACDEAVQA
VARGTADLAGLAIVLGHPRAAAPGAPAFSSCLNAASVLRAGRVEQTYTKRELPNYQVFDERRYFVAGDAP
CVFEVEGVRVGLLICEDAWFSAPARDAATAGAQLLAVINASPFHLGKGAEREQTMRERVAETGLPLVYAH
LVGGQDEVVFEGRSFALNADGTVAMRAPAFEEKLVFAQVHQAQAAIEMEADVAPERSLEADLWDALVLGV
RDYVGKNGFPGALLGLSGGIDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDARDMAARLGVRYDEI
AIAPQFEAFKAALAPLFEGRAEDTTEENLQARIRGTLLMALSNKFGAVVLTTGNKSEMATGYCTLYGDMA
GGFAVIKDVVKTRVFDLARWRNANDPYGTGANPIPERIIIRPPSAELRPDQKDQDSLPPYEVLDAILARY
MENDEPVEDIVRAGYDRADVERVTRLIKINEYKRRQAPVGVRVTRRSFGKDWRYPITNKFRA
>gi|319762456|ref|YP_004126393.1| nitrogen regulatory protein p-ii [Alicycliphilus denitrificans BC]
MQMITAVIKPFKLEEVREALAECGVTGLTVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIEVVVRTEDV
DRCVDAIVAAARTGKIGDGKIFVTAVERVVRIRTGDLDDAAV
>gi|319762457|ref|YP_004126394.1| conserved hypothetical protein chp00730 [Alicycliphilus denitrificans BC]
MADAAFSICVYLGSRPGNNSLFTEAAVAVGRWIGQHGGQLVYGGGRSGLMGTVAEATRLAGGRVVGIIPQ
ALVDKELANHLCDELHVVTSMHERKAMMAERSDAFLALPGGIGTLEELFEVWTWRQLGYHDKPVGLLDTN
GYYGGLLDFLRHSERCGLMSEWQMGLIRTGIEPAALLAALVQDAGLSASTIPLRDVI
>gi|319762458|ref|YP_004126395.1| diacylglycerol kinase [Alicycliphilus denitrificans BC]
MSLPPASPHPHKQRTGLNRLWHATGYSVAGLRAGWGEKAFRQELCLAAVLLPLAFWLGNGWTETALLAGT
VVLVLITELLNSGIEAAIDRIGPELHELSKRAKDMGSAAVLLSLLLCGATWAAALYQRFIHG
>gi|319762459|ref|YP_004126396.1| rdd domain containing protein [Alicycliphilus denitrificans BC]
MHAPSQPGSTQSSNAATPSPPAPSAGTMAPPLYRRMACWLYEGMLMFGVVFIAGYLFGTLTQTRHALDNR
HALQAFLFVVFGIYFVWFWSRGHTLAMKTWHIRVVDSQGRAISQWRALLRYLLSWLWFLPPLAAYAAGIP
VLATLLLLTLWVIFWALASYLHPQRQFWHDALAGTRLVHHELPPRPRKNK
>gi|319762460|ref|YP_004126397.1| transmembrane protein [Alicycliphilus denitrificans BC]
MHAPSGSTPAYTLPAFLLAFVLLSALAAAGWWMAIYVRIAPSTPVPAQALHAGKHRVLGEPRLPPQPEAG
PPWTALTTAQKEALYPLADRWSVLSEVQKRNWLSLAAGFHALSPEEQQKMLARITDWASLSAQQRSQARL
NYAAAAQLPADSRRAQWEAYQALSAEEKKRLAAKAAPRPRGAATAVRPVSPKKLARVPAAADTPPAVPNP
PKIVAPELIHTPQVLPAPAPAVVETAPIATPSAVPASLPPLQPASVPDAREEPVRDLTPLHPPQ
>gi|319762461|ref|YP_004126398.1| transmembrane protein [Alicycliphilus denitrificans BC]
MNRTTEPTMQAAQAADAYARRLAARLTHGNADLPYDITERLRAARMQALARRKRPVSLPVRETAAAPQVV
SNGSTAALGGWGREDGTWWRALVSAVPLAALVVGLFFVNMVQDDAVATEIAEVDAALLTDDLPPSAYADP
GFLQFLKSANQTR
>gi|319762462|ref|YP_004126399.1| RNA polymerase sigma factor, sigma-70 family [Alicycliphilus denitrificans BC]
MATEHELSDFLKSVDKRAFKRTLYHVRNEEAALDIVQDSMLKLAEHYGDKPPGELPMLFQRILTNCTLDW
FRRQKTRNALFSSLSDFEGPGEDGADFDLLEVHAGLPEGETAQSAEDTLRRTQVLQAIEIEIQQLPARQR
EAFLMRYWEEMDVSETAAAMGCSEGSVKTHCFRAVQSLSKALKAKGIVL
>gi|319762463|ref|YP_004126400.1| acetolactate synthase, large subunit, biosynthetic type [Alicycliphilus denitrificans BC]
MEISKAEISSAAQAARGGNPHASGTQELMGAEILVKALQAENVQYMWGYPGGAVLYIYDALYKQESIQHV
LVRHEQAAVHAADGYARATGEVGVALVTSGPGLTNAVTGIATAYMDSIPMVIISGQVPTPAIGLDAFQEC
DTVGITRPIVKHNFLVKDVRDLALTLKKAFHIARTGRPGPVVVDIPKDVSFKKTAYHGYPQSVEMRSYNP
VKKGHAGQIRKALQLLLGAKRPYIYTGGGVLLGNATQELRALVDMLGYPVTNTLMGLGAYPATDRKFLGM
LGMHGTIEANNTMQNCDVLLAVGARFDDRVIGNPKHFAQNDRKIIHIDIDPSSISKRVKVDIPIVGDVKE
VLTELISMIRESTTRPDAGALSAWWDQIEAWRGRDCLKYDRGNTEVIKPQHVIETLWNMTKDADAYITSD
VGQHQMWAAQYYKFDEPRRWINSGGLGTMGVGIPYAMGIKLAKPDAEVFCVTGEGSVQMNIQELSTCLQY
NTPIKILSLNNRYLGMVRQWQEIEYSGRYSHSYMDALPNFVKLAEAYGHVGMLIERPQDVEPALREARKL
KDRTVFLDFRTDPTENVFPMVQAGKGITEMLLGSEDL
>gi|319762464|ref|YP_004126401.1| acetolactate synthase, small subunit [Alicycliphilus denitrificans BC]
MKHIIAVLIENEAGALSRVVALFSARGYNIESLTVAPTEDPSLSRMTIQTTGSDDVIEQITKHLNRLIEV
VKVVDLTEGAYTERELMMVKVRAVGKEREEMKRMADIFRGRIIDVTDKSYTVELTGDQSKNDAFLQAIDR
TAILETVRTGASGIGRGERILRV
>gi|319762465|ref|YP_004126402.1| ketol-acid reductoisomerase [Alicycliphilus denitrificans BC]
MKVFYDKDCDLSLIKGKTVAIIGYGSQGHAHAQNLNDSGVKVVVGLRKGGASWDKVGKAGLTVKEVNDAV
KEADVVMILLPDEQIAEVYKNNVEPNIKQGASLAFAHGFNVHYNQVVPRADLDVWMVAPKAPGHTVRNTY
TQGGGVPHLVAVHQDKSGRARELALSYAMANGGGKAGIIETNFREETETDLFGEQAVLCGGAVELIKMGY
ETLVEAGYAPEMAYFECLHELKLIVDLIYEGGIANMNYSISNNAEYGEYVTGPEVINEQSRAAMRNALKR
IQDGEYAKMFIQEGRLNYPSMTARRRNLAAHSIEQVGAQLRAMMPWIAKNKLVDQSRN
>gi|319762466|ref|YP_004126403.1| cdp-diacylglycerol/serine o-phosphatidyltransferase [Alicycliphilus denitrificans BC]
MHDGNDVGEGTGVLVRKRRKGIYILPNLFTLAALFGGFYAIVMAMNGRFEMASIGVFCAMVLDSLDGRVA
RMTNTQSAFGEQMDSLSDMVSFGAAPALIAYVWALQGLGRWGWIAAFVYCACAALRLARFNVNTGVVDKR
YFQGLPSPAAAALVMGFIWLLTDAGVRPGQGVLSLSWGQITWVMFGFTLYAGLTMVTNVPFYSFKDLHMK
KSVPFSAIVLIALGIAVINIHTPTVLFGVFVLYGLSGYAVYVWRKAKGQHTSVISTSTDEPDEQGLHH
>gi|319762467|ref|YP_004126404.1| maleylacetoacetate isomerase [Alicycliphilus denitrificans BC]
MLKLYSYFRSSAAYRVRIALALKSLAYDTIPVHLLRDGGQHNGSAYRGANPQGLVPALQMAERGPVLAQS
LAIMEYLDEVHPAPALLPADALGRARVRGLAHMVACEIHPLNNLRVLNYLTQELGVSGAQKDAWYAHWVA
LGLRAVEDVLARSGDTGRFCHGDTPGLADCCLVPQVFNARRFNCALDAYPTIARIVDACEQLPAFRQAAP
DMQPDAEHALAR
>gi|319762468|ref|YP_004126405.1| fumarylacetoacetate (faa) hydrolase [Alicycliphilus denitrificans BC]
MKLATLQQGGRDGTLVVVSRDLAHCRAVPAIARTLLAALDDWATVEPQLRQVYEALNSGAIKGDPFDQAA
CHSPLPRTWQWADGSAYINHVELVRRARNAEVPESFYTDPLMYQGGSDGFIPPYGKIVAQDAWGIDFEAE
VAVVTGDVPMGATPEEAAKAIRLVMLVNDVSLRNLIPSELAKGFGFFQSKPASAFSPVAVTPDELGDAWR
DAKVHLPLVVHLNGQLFGKPDAGVDMTFDFGRLIAHVAKTRTLCAGSIIGSGTVSNKQGSLWGSSIANGG
VGYCCLAEVRTYEAIEQGKPATPFMKHGDTVRIEMFDGQGRSVFGAIENQVDTRSAA
>gi|319762469|ref|YP_004126406.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MTAHSLNPSQAPQINVTELIDRNHIGVRQWMILILCGACMVMDGFDVQAIGYVAPAILQEWNIEKSAMGP
VFGAGLSGLLVGSLVLSVLSDKIGRRPVLIASTFFFAVCMLVTPLADNVEHLVVLRFVTGLGLGAIMPNT
MALCGEFSPQRRRVFVMMLISCGFTVGAMLGGMVAAALIPSFGWKSVFYAGGAIPLIIAITMMFWLPESV
QFQALHGVPAGRILPVVRRLLPQEHIPANAEIARPAAKPKGAPMVRLFAEGRTTGTLTIWCISFLNMIGL
YFLSQWLPTLAKGAGLTIQTAVLLGTMLQLGGTIGTILMGALIDKYGFKPVLLGCFILAFISVASIGHAS
NELVVLFTSVFVAGFMVIGGQPAINALAASYYPTALRTTGVGWSLGVGRIGSVLGPVVGGQLIALSWSQA
NLFHVVAIPSLLILGLLLFGVQVTRKPLSAAEAPAAH
>gi|319762470|ref|YP_004126407.1| glyoxalase/bleomycin resistance protein/dioxygenase [Alicycliphilus denitrificans BC]
MAFLNGVHHVAYRCKNAKATVEWYQKYLDANFILAIAENQVPSTKEPDPYMHIFIDIGGGNILAFFELPT
KPEMIAPSDANTPSWTQHLALKVDSIETMMKVKARMEADGIQVIGPTNHTIFQSIYFRDPSGHRLELAVN
TATPQMDKALDDVKWDMLNEWDRTKKAPTHARWMHDGSGRIGSD
>gi|319762471|ref|YP_004126408.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MNVTLRQLSAFVAVAETGSFTLAAERLFITQSALSGLIKELEASLGLRLFDRSTRRLRLSDTARELYPQI
EKILHDLDGVVSEVGNLKALQRGSVRVAVPQLLACTLLPELMAGFRAQHPGVHLRLVDCAVESVMARVFS
GEVDIGIGPERETNSDIAADRLFCMPFMAVMPPGHVLARRRTLQWHDLSGQSLITLQGQFTDLLVSDVGE
AARGLHKEAFMQVTFMTTALALARAGLGITLCMPYARSLVEQFGLVMRPVGDPVVERSFWIFTRRGRAPS
PAAQGFRTFLEERLMDGRAGSA
>gi|319762472|ref|YP_004126409.1| 2-isopropylmalate synthase [Alicycliphilus denitrificans BC]
MLHNPAAKYRPAAPVRLTDRTWPDAVITKAPIWCSVDLRDGNQALIEPMDIARKMRMFEQLVKIGFKEIE
VGFPSASQIEFDFVRKLIEEDRIPDDVTIQVLTQAREPLIHRTFEALVGAPRAIVHLYNATAPVMRRVVL
GMSKDEIVDLAVSHARLFKELAAKQRATDWTFEYSPEMYSDTELEFSKRVIDAVTDVWQPTPQKKCIINL
PTTVEHSTPNIFADMVEWTHRHVQRRDSIVLSVHPHNDRGTGTASAELALMAGADRLEGCLFGNGERTGN
LDVVNVALNMYTQGVSPGLDFSDIDGIRSTVEYCNQLPVHPRHPYVGDLVYTSFSGSHQDAIKKAFAERR
EGDIWDMPYLPIDPKDLGRSYEAVIRVNSQSGKGGISYLLEGEYGLQLPRRLQIEFSQAVQREMDASGKE
LTAEDLWNLFQQEYRFKSVAAPAYRMQEQDGGFSLRASLQWQGEPLEIEGEGTGPIDAFVQAVSSAFDRD
VRVLDYSEHAIGEGAGAKAVAYVEMRIDGQHTVYGVGMDANIVSASIRAILSGLERVPQVQAAVA
>gi|319762473|ref|YP_004126410.1| 2-isopropylmalate synthase [Alicycliphilus denitrificans BC]
MSTDKLIIFDTTLRDGEQSPGASMTRDEKLRIARQLERLKVDVIEAGFAASSNGDFECVQAIARAIKDST
VCSLARTNDRDITRAAEALKDAGRARIHLFIATSPLHMEKKLRMTPEQVLEQSRLSTRFARNLAEDIEFS
AEDGYRSDPDFLCRVVEAAIEEGATTINIPDTVGYAIPELYGSFIKNLRERVPNSDKAVWSVHCHNDLGM
AVANSLAGVKIGGARQVECTINGLGERAGNCSLEEVVMAVKTRRDYFGLEVGIDAKHLLAASRMVSQTTG
FVVQPNKAVVGANAFAHASGIHQDGVLKARDTYEIMRAEDVGWSTNKIVLGKLSGRNAFKQRLQELGVEL
ESEGEINAAFARFKELADRKSEIFDEDILALVSDESMHGDKEQFGFVSLAQHSETGERPQASIVFTMNGK
EVRSSSEGNGPVDASLKAIEAHVQSGAEMVLYSVNAISGSTESQGEVTVRLQNAGRVVNGVGADPDIVVA
SAKAYLSALNKLQSKAERVAAQG
>gi|319762474|ref|YP_004126411.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1 [Alicycliphilus denitrificans BC]
MHARFRIASRLSHALALLAVGVALASPGAHAAERKHAVAKKHSTTVAAKRAAPRQAAVKVRHKTVSAKAT
RVSARSARAPVRMVAEPARLSFGQLAGLHEVSDPLDLKSSVALVIDQDTKEVLLSKNDHAVLPIASLTKL
MTGLLISEARLPMDEPITITQDDVDTEKGSGSRLTVGTTLSRGELLHLALMSSENRAAHALGRTYPGGLA
VFVQRMNAKARLLGMTETRYVEPTGLSSKNQSSAHDLATLVNVAHGDPLLRELSTSPSHEVAVGQRVLQY
NNTNRLVKSPSWDIGLQKTGYISEAGRCLVMQAQVAGRKLIMVFLDSAGKFSRLGDAERVRSWVEKGHPG
SSASLHLGVTSPSS
>gi|319762475|ref|YP_004126412.1| transcriptional regulator iclr [Alicycliphilus denitrificans BC]
MKKSPADMTAKPNVQVLERMFQLIDVLAAKEESVSLKEISEKTGLHPSTAHRILNDLTIGRFVDRPESGS
YRLGMRLLELGNLVKARLSVRDAAMAPMRQLHKLIQQPVNLSVRQGDEIVYIERAYSERSGMQVVRAIGG
HAPLHLTSTGKLFLAADDPQRVRAYATRTGLPGHTRNSITQLLLLERELSKARQYGVARDNEELELGVRC
MAAGVYDDQGQLVAGLSISAPADRLDEGWLPKLQATAREISLALGYTTGMRTALNGPEKS
>gi|319762476|ref|YP_004126413.1| sodium/proline symporter [Alicycliphilus denitrificans BC]
MQFSWNDPTAIMFAIYLVAMLGIGALGYLGTKNLSDYILGGRSLGSFVTALSAGASDMSGWLLMGLPGAI
FVSGLSESWIAIGLVAGAYLNWRLVAARLRLYTERAGNALTLPDYLANRFEDKSNLLRIVTALVILVFFT
LYCASGVVAGARLFENMFGMPYATALWVGAACTIAYVLIGGFLAVSWTDTIQASLMITALILAPIMAWLA
VQGQLQPGQDWHAIVAPEKFDMLRGASLVGIVSLLAWGLGYFGQPHILVRFMAASSVQTIPNARRISMTW
MVLCLAGAVAVGFVGIPFFTAGQAGADAVHANGETVFMEIAKQLFNPWIAGALLAAILAAVMSTLSCQLL
VCSSALTEDIYRAFLRKNASEQELVWIGRAMVLLIAVIAIAIASNPESKVLGMVSYAWAGFGAAFGPVII
LSLFWERMTRGGALAGIVVGAVTVLVWKQGGWLGLYEIVPGFILGWLAVVVTSLLGTPPSHSMRKAHAAV
QQEFARIGAR
>gi|319762477|ref|YP_004126414.1| delta-1-pyrroline-5-carboxylate dehydrogenase [Alicycliphilus denitrificans BC]
MTTTIGIKVDDLLRERIRGAAQRMNRTPHWLIKQAVVQYVDALERGATTIRLFGADEGVPEDGAEMVQPA
AQEVQPFLAFAQSILPQTELRAAITAAWHRPETECLPALLPLARTQDEEQAAKVRELATRLVQGLRDAPV
TSGVAALVQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISKGDWRAHVGRSPSLFVNAAAWGLV
LTGKLTSTSSEKSLSAALTRVIGKGGEPLIRQGVHRAMKLMGEQFVTGQHIAEALANSRAYEKQGFRYSY
DMLGEAAATDADAQRYLRDYEQAIHAIGAASAGRGIFEGPGISIKLSALHPRYSRAQYERVMQELLPRVL
HLAELAKQYDIGMNIDAEEADRLELSLDLMEALCAAPSLKGWSGIGFVVQAYQKRCPYVIEYLIDLARRS
RRRLMVRLVKGAYWDSEIKRAQIDGLAGYPVYTRKVYTDVSYLACARKLLEAPDAVYPQFATHNAQTLAS
IYQLAQSVGGSYYSGQYEFQCLHGMGEPLYAQVTGPAAEGKLARPCRIYAPVGSHETLLAYLVRRLLENG
ANTSFVNRIGDAGVPVADLVADPVGEVLEIARTEGRLGAPHPRIPLPAELFGGPGGQARANSRGLNLAHE
QQLASLAAALLHSTRQAWLAAPPDVPLPADPAATPGWQALPNPAELADTVGWVHEATEAQVQAATGRAAQ
AAPIWAGTPPAARADVLARAADLLEQRSQPLMGLIMREAGKTLPNAIAEIREAVDFLRYYGAQVAAQFDN
ARERPLGVVLAISPWNFPLAIFTGQVAAALAAGNAVLAKPAEQTPLTAAAMVAILHEAGVPQGALQLMPG
RGETVGAALVAHPQVAGVMFTGSTEVARLIARQLARRLSPSGHPIPLIAETGGQNAMIVDSSALAEQVVA
DVLASAFDSAGQRCSALRLLCLQEEVADRTLTMLRDALQEWQLGNPDRLSTDVGPVIDADARAQIEAHIE
RMQAAGQKVTRVERRDGSLNGHFVAPTIIEIDSTSRLTREVFGPVLHVIRYAREQLDALVDDINATGYGL
TFGVHSRIDETIAHLSGRIAAGNIYVNRNVIGAVVGVQPFGGMDLSGTGPKAGGPLYLHRLVQGEPNAAL
QALPRADAGQPQPALELLARLQQAVLPGVGQDQARMACDAALAASRLGAGQLLPGPTGESNRYRLLPRGP
VWALPRTPLGLVHQVAASLASGNPCHVVLPQDDDGCAALWQALRAAAGDTGAAWLHGADAAALGDGTAAM
SALLFEGDGDALLQVGAQVAAREGAIVRVESRSSDELQAGRGYDLAALCHEQSISTNTAAAGGNAQLMTM
A
>gi|319762478|ref|YP_004126415.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDFDYSPKTKELQARLRQFMDDHIHPAEKACAEELAAHTAAGNRWQPLQTIENLKPKARAAGLWNLFLPV
DTAEASGYHGAGLTNAEYAPLAEIMGRVLWASEVFNCSAPDTGNMETIARYGSEAIKAEWLTPLLEGRIR
SAFAMTEPDVASSDATNICTRIERQGHHYVINGRKWWISGANDPRCKVFITMGKTDPDAPRHSQQSMIVV
PADTPGITIVRPLNVFGYDDAPHGHAEVVFDDVRVPVDNILLGEGRGFEIAQGRLGPGRIHHCMRLIGQA
ERALELMCQRTLSRTAFGKTIAQQGVTQERIAEARCRIDMARLLTLKAAWMMDTAGNKVAKTEIAMIKVV
APGMACQVIDWAMQAHGGGGVSDDFPLAYAYANARTLRFADGPDEVHRSAIAKWELGKHATRP
>gi|319762479|ref|YP_004126416.1| aminoglycoside phosphotransferase [Alicycliphilus denitrificans BC]
MSNFDHFIGTRPVSGQHAFDTGALGAWLSRHLEDFAGPLTVEMFKGGQSNPTYKLITPALSYVMRAKPGP
VAKLLPSAHAIEREYAVMSGLAGTGVPVPRMFALCEDESVIGRAFYVMEFMQGRVLWDQSLPGLQPAERA
AIYDEMNRVIAALHTVDFAARGLAGYGKPGNYFERQIGRWSKQYLASVTQPIPEMDRLMEWLPAHMPASA
RDDSRVSIVHGDYRLDNLMFHPTEPRVIAVLDWELSTLGHPLADFAYHCMSWHIPASLSRGIGGLDLAAL
GIPAESDYIRRYCERTGIADVDALRADWNFYLAYNMFRIAAILQGIAKRVEAGTAASAQAKAAGATARPM
AQLAWSFAQRSHS
>gi|319762480|ref|YP_004126417.1| cyclic nucleotide-binding protein [Alicycliphilus denitrificans BC]
MDEPILTIEEREAINSGRWFSSLSPSLRHDILRCSYVKRYKDGTLIAARGDPPEDWIACARGAVRVSSIS
LSGKQITLTYVEPGIWFGDVAIFDGDQRTHDAYAHGDTTILCVTRTDFRKILAQHTELYEAMLRLHARRI
RQLFGLVEDLNTLPLRSRLAKQLLHLVRSYGVPSLSDGSEIRIGLQLAQEELAQLLGASRQRVNQELKAM
EREDTIRIEPGGLVVRDREALMRIAEASP
>gi|319762481|ref|YP_004126418.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MTAELQSTSHGQTLVLTLRAPQARNALDGAICAAGIEALSVAERSDEVRCVVITGADGVFSAETSLERLQ
ARRQQPAQAQAQGVELLHHWVEAVRTHPKPVIAAVEGMAEGAGFSLALACDLVVAARNAAFAMGGARLGL
SPAGGASWNLPRSLPHQMASEILLCGEHIAAPRLHALGLVNHLAEPGRALHEALALAQRLNARAPNALAS
IKELVGDAPQRSFTEQLAHERDHLVRSLQHANAGEGIAAALEKRTPNYK
>gi|319762482|ref|YP_004126419.1| 3-hydroxyacyl-CoA dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MNAAFTSIGIVGTGAMGRGIAQIAAQAGSTVYLFDTKPGAVDAARTHLHGQWQRLADKGRIDATQVPVLL
ERLVRAASLHDLAACELVVEAIAERLDAKRELLLELEYIVAPGAVLASNTSSLSITALAAPLTHPQRVAG
FHFFNPVPLMKVVEVVAGLRTEAVVCARLAQYARAMGHTPVMAQDTPGFIVNHAGRGFGTEALRIVSEGV
ADFATVDRILRDQAGFKLGPFELMDLTALDVTHPAMESIYHQYYEEPRFRPSPITAQRLAAGLLGRKTGE
GFYRYVDGAAQVPAEPPAPRPASLPPVWVSPRAARRAELYQLLKSLGATIETGATPSAGALILVAPLGFD
VTTVAVVERLDPTRTVGIDMLIDDAATRRRVLATNPATREDMRDAAHALFASDGKAVSVIRDSGGFVTQR
VVATIVNIAADICQQRICSPQDLETAVTLGLGYPLGPLAMGDRWGPTNILEVLFNMQTVYGDARYRPSPW
LRRRGAIGLSLTHEEP
>gi|319762483|ref|YP_004126420.1| hypothetical protein Alide_1781 [Alicycliphilus denitrificans BC]
MRNVLVGACLCVAASGVAALSLGASRGAVVLGSAIDLGFEVRPDPGKDLASSCISAHLVSGTTSIADSRV
RVTPVDGGVIPMVRVQATMVADEPVLTVTIAAGCEGRVTRTYTFLADLPAAGAANTQGPLDIGRLGTADP
GTFAARPANAVAAAAGPRTPAAAGAAAVQSLVRREKPQAGASAGQAADKPARPRARATVPAPVPTAAARL
IVEPLDLWLDAPLELRLSREEPLLLSTPDEARRAEFAALWKVLNSSPADLRQSMERLGRLEADAAAHRRQ
ADAGRAEARGLRQQLEQLQSQSFSAGVVYALGGALVLALAAIAWLLRRTRREALQAWHNSVALSEGLKDG
AVVSEGPDGKVRWQVEPEAADTWHPSSVPPEELQEAGPGPSDAPDTIPPAPAQTAAPEPAARLAAPRQQA
IQPEGLFDIQQQAEFFISIGEHEQAIQVLRSHIAEQGDAMPAMYLELLRLFQMLGRTDSFEQLRRQFQER
FNVQVPRYTQWHESGHALEDYPEALAQIEALWSSPEVLGVLDGFLFRRGDGRDAQRFDLAAFDDLLLLLA
IAQTTPAHLRGAPPPRARTTPLGPAAAVPRSLDSIVGDLSLMPSGYDVLAKQPPVEDMLDVDLSEPAQFT
LRDHQPEAGAAAPAHGQSVGFAMDDDKLELRFELERMENRRY
>gi|319762484|ref|YP_004126421.1| thiamine-phosphate diphosphorylase [Alicycliphilus denitrificans BC]
MHESHEAMVQAIVHHHGAAYADFPAQPVPATATDEPVYRAALAACSALGFIAHDAGCLARAWAAQTRRLG
SFDAARWPDDPADFGLQPRPHARPFAPCPQQLGLYAVLPDAAWVGRMARAGVPTVQLRYKSQDGAAIARE
VQAAVQAVRGTPALLFINDHWRAAIDAGAYGVHLGQEDLDALGPDDLRAIREAGLRLGVSTHGYAEMVRA
DAASPSYIAMGAVFPTTLKKMATVPQGVARLVAYARLMRGYPQVAIGGIGLEQFPQVLATGVGSIAVVRA
LVNADEPEASAARLMRAMQA
>gi|319762485|ref|YP_004126422.1| thiazole biosynthesis family protein [Alicycliphilus denitrificans BC]
MNTPNDDALVLYGQRFESRLLLGTARYPSPAALQAAVQRARPAMLTAALRRQGSIEQGKSFWAMLKELQV
PVLPNTAGCHSVQEAITTSHMAREVFDTPWIKLEVIGDDYTLQPDTLNLVQAAEQLVRDGFYVLPYCTED
LVLCQRLVDVGCQAIMPWAAPIGTGRGPVNPYAMQTLRQRLDVPMLVDAGLGLPSHACQVMEWGFDGVLL
NTAVAQAADPVRMASAFADAVAAGRAAHLAGAMQPRESAQPSTPVLGTPFWHHAQEA
>gi|319762486|ref|YP_004126423.1| thiamine biosynthesis protein this [Alicycliphilus denitrificans BC]
MNILINQNPVELPDGASVADAVASLDPTPPFAVAVNLQFVPRAAYATHLLQAGDSVEIIAPVTGG
>gi|319762487|ref|YP_004126424.1| glycine oxidase thio [Alicycliphilus denitrificans BC]
MLAHPSLRSPSFITILGAGLMGRLLAVALARQGHKVEVHEAGSRDGATSAAHVAAAMVAPLAESIVAEPG
VVRMGQHSLARWPGLLAQLVQPVYFQHNGTLIVWHRQDAPEAARLRQKFEQTQGAVPQLPHMQPLDAAAL
AEREPALAGRFSQGLYLPGEGQLDNRQLLDALAATMDALGVATHWHSARAPQDFAPGAAGQPDWLLDCRG
LGAREQWQGLRGVRGEVVRLHAPDVTLQRPTRLVHPRYSIYLAPKEDHRFVIGATEIESEDLSPASVRST
LELLSAAYAVHPGFAEARITELTTQCRPTLPDNLPAIRMPRERVLQVNGLYRHGFMIAPAMLDVVMQLLG
EGQSALAPDFELALQGGAATAA
>gi|319762488|ref|YP_004126425.1| phosphomethylpyrimidine kinase [Alicycliphilus denitrificans BC]
MTQETPTSTRRYARVLSIAGSDSGGGAGIQADLKTFCALGCYGMTAITAITAQNTQGVRAIHGVPTDILR
AQIDAVVEDIGVDAVKIGMLHAPEVVQVVAEAIRRHRLPSVVLDPVMVATSGDRLIAEETVGTLVRELFP
LAAVVTPNLDEAGWLLGRPITGEDELDAAAGDLLALGARAALLKGGHLPGERVVDLLALPGGERHRLASA
RIATHNGHGTGCTLSSAIAAHLALGLPLVRAVEEARAYILGAIAAGADVRTGHGHGPLNHGYAPQPQRIL
EG
>gi|319762489|ref|YP_004126426.1| sh3 type 3 domain protein [Alicycliphilus denitrificans BC]
MSFAPSRLARTLSTATAALALAAPLLAPATAGAREFVSIKSNAVNVRAQPTTRSDTRWELGRGYPLQVEQ
RRGQWLKVRDFEESLGWVFAPLTSKTPHRVVTAPSARLRAGPGTQHKIVGTLQQHEVVRSLGQSGAWAKV
QRDGGQKGWVAKRLTWGW
>gi|319762490|ref|YP_004126427.1| permease for cytosine/purines uracil thiamine allantoin [Alicycliphilus denitrificans BC]
MNTLATPRNEALAPLPAGQRVFRWHDHASLWFSLGVGLLVMQVGAYLMPALGTQQALLAVVVGSIIGAGL
LGWVAKIGCDSGLASAGLMHAVYGRRFAGLPIVLNIVQLVGWGTFELVVMRDATVAIGRQSGMLAAGAWP
VAATLLWGGVVLLLISGSMVQLVRRVIARVALPLVVLSLLWLSWQFIAMAQAQGLAQIWQRRGNGGMGVM
PALDLVIAMPISWLPLVADYARHGVSGAGALRGSWIGYALANIWCYCLGVLVALVLPSQDLVTALLLAQG
GLLALSLILIDEVDNAYGDMYSGAVSAHSLRPRWSVRRWGLGLAALCTALALVLPMHSLEPFLLLLSSVF
VPLFGVILGRLAFGVPAHAALQRAAGVHGLPVALWLAGIACYHLLPRALPALGAALPTLALCFALAYLTR
PRG
>gi|319762491|ref|YP_004126428.1| fad-dependent pyridine nucleotide-disulfide oxidoreductase [Alicycliphilus denitrificans BC]
MQAPSAPAPAQADAVVIGAGPVGLFQVFQLGLQGIAAHLVDALPHVGGQCAELYPDKPIYDIPGVPVCSG
RELVALLQRQMAPFAPACHLGQQVETLAAQDDGRFLLQTTAGTRLLAKSVFIAAGVGAFVPRTIKVDGIA
ALAGGQVLYHPTDTGVANARHVVVHGGDEAAVQAAIACAPLAASVTLLHRRDVFQAEPALLAELQTLREG
GRIRVAIGQITGVQAAPDGRLQALVLQLPDGSQQHLPLDLLLAYLGISPRLGPVAGWGLAMERKQIAVDT
ATFATSVPGIYAVGDVNGYPGKRKLILCGFHEATLAAFAEAERQAGHRLPLEYTTSSERLHARLGVGA
>gi|319762492|ref|YP_004126429.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Alicycliphilus denitrificans BC]
MTHVVVENCIKCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCVPECPANAIFAEEDLPSDQLAFIK
INAELTPKFKSITKRKAALPDADEWNGTPGKLKDLER
>gi|319762493|ref|YP_004126430.1| sulfate adenylyltransferase, large subunit [Alicycliphilus denitrificans BC]
MTTNLIADTATAAGAAARNDHVSALKFITCGSVDDGKSTLIGRLLVDSRAVLQDHLAGVQRGGEVDLALL
TDGLSAEREQGITIDVAYRYFATEARKFIIGDAPGHEQYTRNMVTAASQADAAVVLVDATKLDWQNPRLA
LLPQTRRHSLLVHLLRVHSLVFAVNKLDAVADPALAFAHIRAALQQFAQDAGITVAATVPVSALKGWNVV
DARPGWCGYEGSSLLQILELLPHTPADAHLPLAFPVQWVEKFSSSSDTRQGRRVFWGRVAAGGARVGAQV
QVFPSGQRAAIAQVLDHARRPGGIQAGGSAGIVLDREVDVSRGDWIVAAPTPAAQAAEDDFDTPAEQPSW
PGRRELGATVAWMDDEPLVAGRVYWALHGHRWVKAKLRRVVHRLDIHTLAEQDATQLEPNAIGHVELLLQ
ESVPAAPFEKARVLGSMILVDTASHKTAGAVLVRT
>gi|319762494|ref|YP_004126431.1| sulfate adenylyltransferase [Alicycliphilus denitrificans BC]
MNARVDTSVLTHLSNQHLDALEEETIFILREVAAAFERPALLFSGGKDSLVMLRCAEKAFMDSKGPSGSR
GRIPYPLLMIDTGHNFPEVTDFRDQRARELGAELIVRSVEDSMARGTVRLAHPGESRNVHQSVTLLEAIE
EFRFDALIGGARRDEEKARAKERIFSHRDGFGQWQPKAQRPELWTLFNTRIAPGEHFRVFPISNWTELDV
WQYIDREAIALPSLYYAHQRQVVERRGLLVPVTPLTPPKDGERVETRTVRFRTVGDITCTCPVESPAASA
AEIVIETLAAEVSERGATRMDDKTSDASMEKRKKDGYF
>gi|319762495|ref|YP_004126432.1| phosphoadenylyl-sulfate reductase (thioredoxin) [Alicycliphilus denitrificans BC]
MSTLDLARINAELGRDAPGLVKWALGLNQAPIVTTNFRPFEAVILHLVTRVQPDVPVIWMDNGYNTEATY
RYADEVTRLLGLNLRIYLPLRSRAHREAVDGPVPALHEPRHAAFTEEVKLEPFARALRETAPKVWFTALR
ATDSAVRAQMDPVSINPDGLIKVAPLLHWTSRDLHQYCEAHDLPNNFDYVDPTKGEEQRECGLHLAH
>gi|319762496|ref|YP_004126433.1| uncharacterized conserved protein ucp030820 [Alicycliphilus denitrificans BC]
MKIIAADAVPESAGAEKTLQIPNDAELAELVASGALEGVQRVELQFPKFTDGRAYSQALLLRRRYRFAGD
IRATGDVLIDQLVHMHRSGFTSAVLAPGVNADAAQRQFDRYSAFYQGDVLEPRPLFAREAA
>gi|319762497|ref|YP_004126434.1| nitrite and sulphite reductase 4fe-4S region protein [Alicycliphilus denitrificans BC]
MYQYTDFDRQFVKLRAQQFRDQLERWQRGELTDEQLLPLRLQNGWYIQRYAPMARIAVPYGEISSLQLRT
LGRIAREYDKPDPELLARAQATQDQLEASQPGQTLPAPPLKYGYGHFTTRTNCQFNWIPITKAADVMDLL
ASVCMHGIQTSGNDIRNITCDAWEGIAEDGIVDCRPFAEITRQWSSLHPEFSYLPRKFKIAFNGAAEDRA
AIGWYDIGLQALRNDAGEVGFTVKVGGGMGRTPIVGSVVREFLPWDQLLNYIEAIVRVYNGYGRRDNKWK
ARIKILVKSEGQAFIDAVEKEYRAIVDLDGAPHTITQAELDRVTSHFVVPELKSAGLPAKVDPQGQLYQR
WLRQNVRGHRLPGMKTVTLSFKRPGFAPGDADADTLDALAQLAEQFSASEARLTHEQNLMLPWVFESDLP
ALYEAARKLGLAQPNIGLLTDMISCPGGDFCSLANARSLHIAAVVTERYQDLDELFDIGPIDLHMSGCIN
SCGHHHSGHIGILGVDKDGKEWYQITLGGADGSQLSGPAIGGKVVGPSFTAAEVPNVIEALLDTFRSLRQ
SGELFIDTLRRVGHDPFKQAANAARHPKVEEAQAL
>gi|319762498|ref|YP_004126435.1| hypothetical protein Alide_1796 [Alicycliphilus denitrificans BC]
MPDFAFILAGFAVGLIVGLTGVGGGSLMTPVLIFVFGVKPNLAVGTDLLFAAFTKLGGTLGLARQRLVPW
RVVAQLCAGSIPAALLALWALRHLGPDSAAAQRLMTTTLGAALLLTAAATFYKVLVFSPERAAAEAARRR
AQSADATRPRHWSLPVLLGAVIGMLVTFTSVGAGAIGVSVLLLVFPHLPLPRIIAADIAYAVPLTLVAGL
GHASLGSVNWPLLGLLLAGSLPGIWLGSRLVARTPERLIRSVLSVLLAWAGAKLVLI
>gi|319762499|ref|YP_004126436.1| tRNA u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein mnmc [Alicycliphilus denitrificans BC]
MTPRTMPESLSWLPDGTPFSTRFGDRYHGEQGLAQARDVFLHGCGLPQAWAGAQQWRILETGFGFGLNFL
ATWAAWRADPGRPRLLHFVSLEAWPVPADALLRAAERHPELLPLARELHAQYWGLLPGVHRLWFEGGRVL
LTLCVGDAQALLRQQLWEVDSVYLDGFNPQCNPDIWSLETLKAMARHCRRGTRLATWTVARSVRDALAQC
GFAVDKVPGLPPKRDNLQARFDPHWQPRTSRQAPEFARPARCLVLGAGLAGATAAASLARRGWQVTVLDA
GDTPAAGASGLPAGLFAPHLSPDDNLFARLSRAGVRAMLQQSQALLQEGIDWSPAGVLERRPAGQPGLPA
GWHDGPGADWSHTADAGRLADAGLPPDASACWHARAGWVRPPRFIARLLEQPGIAWRPRSAVARLARGAG
TWQALDGAGNPLAEAELLLLAAGPACNALLAPLQAPPLPLQPVRGLMSWGPQPAQAQGLPPFAVNGGGAL
AAHVPCDGGPAWHMGATFERDVDRLPMTAEEQAAAHASNWRRLRALVPAAVPALRAAFEDGQGLRAWAGV
RCTAHDRMPIVGPVAPAALPGLWVSTAMGARGLTRAVLCAELLAARLMGEPLPVEARLAQAMGCERL
>gi|319762500|ref|YP_004126437.1| uncharacterized protein family upf0126 [Alicycliphilus denitrificans BC]
MLPSVSLLESFQASQMSFMLAIYLLAIMAEAMSGALAAGRRNMDIFGVTVIAFVTALGGGTIRDMVLGHY
PLGWTQHPEYVYLVIAAGLLTTVVARYMIRLKRVFLLLDALGLVAFSLIGCSVALELGYPGVVVVMAGMI
TGISGGILRDVLCNQVPVVFRRELYASVSLAVCLLFLALRAWDVDHDIGTAVCFAGGLALRLAAMRFHWR
LPVFSYQQRWE
>gi|319762501|ref|YP_004126438.1| fe(ii) trafficking protein yggx [Alicycliphilus denitrificans BC]
MARTVHCIKLGKEAEGLDFPPYPGELGKRIYENVSKQAWADWLKHQTMLVNENRLNLADARARQYLARQM
ENHFFGGGADAAAGYVPPSA
>gi|319762502|ref|YP_004126439.1| sulfate abc transporter, periplasmic sulfate-binding protein [Alicycliphilus denitrificans BC]
MKNRRHFIKFPLAAVLAGAMSLTVLPSLAQPAQFLNVSYDPTRELYAEYNQAFARHWKARTGQDVQLRQS
HGGSGKQARSIIDGIDADVATLALGGDVDALARHGLLAADWQKRLPHNSAPYTSTIVFLVKKGNPKGLKD
WDDLARPGVQVITPNPKTSGGARWNYLAAWEFAKRKYGGDAQARDFVGRLYKNVPVLDTGARGSTITFVQ
RGVGDVLLAWENEAFLALQEFGKDKFEIVVPSLSILAEPTVAVVDKVVDKKGSRALAEEYLKYLYSDEGQ
EIAGKNYYRPTSEKARARFDAQFPKLTLVTIDQAFGGWARADKEHFADGASFDQIYTKK
>gi|319762503|ref|YP_004126440.1| hypothetical protein Alide_1801 [Alicycliphilus denitrificans BC]
MSVLLIAGSSSPRSRSAALLDAVGLRLARRAAPPEHLHIRDLNPQVLLLADTGHRSVAQAVQRVQALVRH
LVITCETDQHRVVGEGRARGEALLPRWVAAIAIGVA
>gi|319762504|ref|YP_004126441.1| tetr family transcriptional regulator [Alicycliphilus denitrificans BC]
MKKKLTDEEFFDALTHLLLAEGIKGLTVGEIATRMHCSRRRLYDIAQTKEEIFCAVVKRFFDGILGQGEA
LIQREQDLTAALAAYLDVGVQAASRIGVQFLKDVEDSAAARSIFDRYQQARTVRLSQLIDEGVRQGVFAP
CHGLVVSELILGAALRLRRPAFLAQANLTIEEAFQEFYRVLLGGLLIDAAAPKVARSGARTSRAAARRAS
VKKNVGDDEVGTMLMAAWNRD
>gi|319762505|ref|YP_004126442.1| hypothetical protein Alide_1803 [Alicycliphilus denitrificans BC]
MVPIYMKWYLLGSIHNALPGVEDSISPPLLKTRELSAIAVLPTQA
>gi|319762506|ref|YP_004126443.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MNLLDFFDAGVASHPDAPCFEDCGRDAPAITYAQAGALTCQIARGLRALGLAPGFHGAVLSGNAGAAFTA
LLGVLRAGGVWLPVNARNGVEANIEFLQDMDCDVLFYQARYAGQVAEIRGKLPRIRHCIALDDAQGPDLS
VARLVQGHSPEMFAASLQPQGLAMIMGTGGTTGRSKGVMLSHRNLTATMANHLSAMAVTDRMTVLAAAPI
THTAGLVSMPFMARGGRVVLMDGIDPQNLLQVIAQERVNMLFLPPTVIYTLLAQPNVRDFDFSTLRYLMY
GAAPMSPDKLAEAIDVFGPVMLQIYGQAEVPGAISVLRVEDHFVDGRVAPRQRLLSAGRRFPFTRVAIMD
DDGNLLTQPGAVGEIVAQGDIVTAGYYKNPEATAEVQRHGWHCTGDVGYFDEQGFLFIVDRKKDMIVTGG
FNVFSSEVEAAVMAHPAVKDCAVIGVPDDKWGEAVRAVIELRPGQSVEPQALIQFVKDRLGSVKAPKEVE
IVAQLPRSAVGKVLKKEVRKKYWHAQERMVS
>gi|319762507|ref|YP_004126444.1| propanoyl-CoA c-acyltransferase [Alicycliphilus denitrificans BC]
MQEPVLVAGVGMTPFKKPGDNLPYPEMAAQAIREALQDAGLAYSDVQDVYAGYVYGDSASGQRAVYEVGM
TGVPVINVNNNCSSGSTALYLARKAVANGSADCALAVGFEQMPAGALRAYWEDRPDPLDRFNGVMDEVFG
HPELPMAIRYFGAAGREHMDRYGTPLDTFARIRAKASRHAARNPLALFRKEVTVEEVLASSPLVPGAMTR
LMACPPTCGAAAAVFVSKKFAQKMGLAANVQVLAQSLVSDRPGVFADKSAISVVGFDMTREAARQVYEAA
GVGPQDIDVCELHDCFAQNELLSYEGLGFCAVGEGQAFVESDSNTYGGAVVVNPSGGLLSKGHPLGATGL
AQCYELTHQLRGSAEARQVEGARLALQHNAGLGGATVVTLYGRAD
>gi|319762508|ref|YP_004126445.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MVKRLEGKVALVTGCGSSGPGWGNGKAMAVLFAREGAKVYGCDVHLDAARETEAIVRQEGGAMSVAPCDV
TDAGAVETLVQDCIATYGDIDILVNNVGTARLGGVVEQSLEDWRLVFDINLTSMFLTCKHAIPSMLRKGR
GSIVNIGSVAGVRDSGVAYVSYSASKAAVLGFSRSVALEYAKRGIRSNVLMPGLMNTPMVRQPVLSLADG
YREASLEETMAKRDRQCPMGHMGDAWDVAYTALWLASDESKYVTSAEIMVDGGISARIG
>gi|319762509|ref|YP_004126446.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MGSVAKWFGKSMVVAAATAMGLVSTGYAQAKPEKFKIGGVLSLSGPYGLLGEDMRRGVQVAVEERGGKVM
GVPIEITWEDDETKPQPAVQKATKLISEGSHMIFGALSSASTLAVMNLTKQRKVPHLVTISADDKITVPG
GSRYTFRTSNTLGMENRMALAYMQDRKLKKIYAVTADYQATRDGYEWIKQQTGPNGIQIVGEDFPPLGNR
DYSSIVDKIAKSDADGVLLMLTGSDVVTLLKQAGQVNLGKNKVLFGPVAADETMAAAVGPASLGVNTGLR
YDHTIDTAANRKFVEAYRKKFGIFPSMTAGEAYDGMAWWLDTVEKTGSWDKEKWVDAFAASVRENSVEGK
KTMRACDHQALQPGFWGEVVQGTPPAPALTMKITKVFAEEKLFEACKN
>gi|319762510|ref|YP_004126447.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MSTIVIGLSLGMLLFLLAAGLTLIFGMLGVINFAHGAIYMLGAYVSYETGRRTGSFLMGVLAATFFTALA
GAVIEKLTLRPLYERPHFYQLILTFGLILILSDVVRFVWGPGYQEVAIPPLWNGTVDMLGSTIPMYRLFV
IGFGALVSAGLYLVLEKSTFGMLVRAASSDAEMVRILGLPVGAIRMAVFATGCGLSGLAGAIAAPLFPIE
LGMATNTIIDCFIVVILGGLGNIRGAIAASMLIGMVRALGYVYLPGWVDIMTFVLLIGTLLTRPQGLFYR
AARTA
>gi|319762511|ref|YP_004126448.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MKLSLFDICFGLLLAAAGILLPFLHPGEALIQLVTLAAIWAIFAIGFDFVFGALGMVSFGHATFLGVGGY
AVALATQKYGLPFSAGVGLAVIVGAAFALLFSFFALRVSGIFFALVTLALSQLIFILADSKLRGFTGGSD
GISGVERPGFLGIDFYDPVHYYWFVLGVYALVMLAVISLRSSPFGRVIAAIRGNETRADQLGFNVNRYKQ
ITFVISGGLSGLAGALLASLLMYMNPQMLHWTTSGDVIIMTLVGGSGSLWGATVGVIAFEVLKEWLSSWT
EYWYGVLGLVFILATIFFPRGIVGELEKGFAAYQKNRRGGAR
>gi|319762512|ref|YP_004126449.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MSQAALRCEGVTVSYGALKAVNDVSHEFQEGRIYGLIGPNGAGKTTLLNVLAGRQMRHAGKVYCGGREIS
QRPAYARARMGIGRSFQIIKIFGEMTVAENLLVAAQSRRPGFQPFWMSRHFDRQFREQLDSILELTGLAV
HRDDIAGTLPYGLQRSLELGVTLLPDPRILLLDEPLAGIGHHEIQAALALIRKAAQGRTVLLIEHNMDAV
MSLSHEIVVMSNGSVIACGAPEDIRRNEAVRSIYLGEDAQ
>gi|319762513|ref|YP_004126450.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MIELEKASVRYGQALALEEISVRIDFHEIVAIVGRNGAGKTTLLKALVGLMPLVAGRRLLGEQDISGLGV
EAIAKLGVALVPDTRRIFPNLSVLENLKIGALAHQPGHWTLDRVLDAFPRLRERLNFGGDQLSGGEQQML
SIGRALLGNPRILLLDEPTEGLAPVIVDQLVRVFSEVHRQGTGIVLVEQNLKVPMKLAHRQYVLDHGQVA
WSGTAQELDAQRAHVEGLITTGAAA
>gi|319762514|ref|YP_004126451.1| carboxymuconolactone decarboxylase [Alicycliphilus denitrificans BC]
MNAHAAARIAPLHENDPRSHDPVLEELVDFVGYRPNALLTMARKPGVVPALLQLLGVTLRGDGLLTQALR
FLIAAETARGARCRYTTTHLVHAAHHVGVDWDKLAALPSYRDDPRYTQQERKALAIATAGGSLPVREPGQ
AITQARQVFTEEEIVEIVSCVAMVGWFNRWNGLMGSELELVPSEALAHAPWLQELEV
>gi|319762515|ref|YP_004126452.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MHSRIHEPHACTLTDALREWAVGRPGAPWLEDSQGNALTIGQAFEASQRFAGFLHQLGVQPEERVGVFMF
NSCAMVATTFGIGYLRATAVMLNTELRSSFLRHQLNDCQLATIVVDAALVEHIAGLADELPHLRTLVVVG
DAPVAVPGRWRQVAWTDSGASAPWEGPAPRPEDIFCIMYTSGTTGPSKGVLMPHCHCALIGLGAMRSLEI
TEADKYYICLPLFHANGLFMQLGATVLAGIPAFLKQKFSASTWLADIRRSGATLTNHLGTTAMFVINQPP
TEQDRDHRLRASLSAPNPAQHEAVFRERFGVKDVLSGFGMTEVGIPIWGRIGHAAPNAAGWAHEDRFEIC
IADPETDVPVPAGQAGEILVRPKVPFGFMAGYLNVPAKTVEAWRNLWFHTGDAGMRDAQGLITFVDRIKD
CIRRRGENISATEVEAVVGQLPGIHEVAAYAVPAQGAGGEDEVMLALVPSDGAVLDMADIALQAGALLPR
FAKPRYLRQMDSLPKTATGKIQRAILRQQGSAGAYDAETAHAR
>gi|319762516|ref|YP_004126453.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MSEKLRGKVAVVTGSGRGIGRAMALKLASEGARLVLNDLDDAPAAAVREEIIALGGEAVACCGNVAAADF
ADRLIAAATGAFGGLDILINNAGYTWDNVIQKTTDEQWHAMLDVHLTAPFRILRAAQPVIRELSRTDAAA
GRRTVRKVVNISSVAGVFGNAGQANYSAAKAGIMGLTMTLAKEWGRLNTTVNCVAYGLIRTRMTEVTGSA
DAAIQVEGREIKVGVNPGLMAMLERSIPLGRAGTPEEAAGAAYLFCIPESDYVSGQTVLCTGGLTGI
>gi|319762517|ref|YP_004126454.1| lytic transglycosylase catalytic [Alicycliphilus denitrificans BC]
MPRRSGSPCSAGVTVAAKTRILESMRPSLPNLVPLSVALFCTVAGGAARAQPSEGDSALAASLREQAIAY
EHGEGVARDARRAANLYCTSARLGDMLAQYHLGWMYANGRGVARDDATAAFFFQAAAEQGLDVAARMLQV
VGGATGEVPECMRPPQPAPVEAAPPGVDYQAIAPPKIMELVHKMAPQYQVEPQLALAIIAAESNFNPQAV
SPKNAQGLMQLIPETSERFQVRNPYDPAQNIRGGLAYLRWLLAYFEGEVALVAAAYNAGEGKVERYRGVP
PYVETRAYVQRILKAVGARAHPFDRTVTQPSPVLERIRLTLRAGN
>gi|319762518|ref|YP_004126455.1| p4 family integrase [Alicycliphilus denitrificans BC]
MATITDTKARNIKPTDPAIPHGGITGLALHPSSTKGHGKWVLRYVSPVSGKRRNAGLGSYPEISIAEVGK
RATTMRIELAEGKDPLEEKAKIDDKPKVPTFKEAAQTLHGDLRPGWKNPKHGQQWINTLQEYVFPKLGNK
PLHEIQPGDVAEVLKPIWLTKAETASRVKQRIHAVFGWGWAHGYCQSNPVDVVGHLLSQQPGKAVRTQHH
PAMPWRDIPEFVQKHLRSGNRPEVNRPGF
>gi|319762519|ref|YP_004126456.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319762520|ref|YP_004126457.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MKAYIDRHRDDYGVEPICRALQMAPSCYWRHAARQRNAQLRSARAQRDEGLKADIQRVWHANWQVYGADK
VWLQMNREGIVVARCTVERLMRAMGLQGARRGRAVRTTTPDTSAPCPLDHVNRHFHASRPNELWVSDFTY
VSTWQGWLYVAFVVDVYARRIVGWRVSRSMQTDFVLDALEQALYDRQPAAHALTHHSDRGSQYVSIRYTE
RLDQAGIQPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGI
PPAEAEANYWRQLAASDTSTKVST
>gi|319762521|ref|YP_004126458.1| hypothetical protein Alide_1823 [Alicycliphilus denitrificans BC]
MNLSLPEDVLDQMALEQAHFDAAPQAFFEAWKRGAQIAGHEWFGDGTREGLQRATTKWDLRPNMLMLNDA
LGVLSSGQRMFLSAMVSFYNSREGGAMLKRCGFEGLSDFGGLDLERRQVIADLTLHYNGW
>gi|319762522|ref|YP_004126459.1| hypothetical protein Alide_1824 [Alicycliphilus denitrificans BC]
MSHSKNPFVRGYDGLSVQRLLAISYDDDCPLSYLPLHVSQSHLPDSQVERHACVFSDDFALITEGQNVPP
ELDAQCPSHGIARNLFYAVMAEEAGKPLHVGDTYSEEAAREVVRRLRFETGFYSRAWEISSAHITEEAGR
YLANLADIATPSGFLFVAFRIPYSAAVGVKLIATPWTDANLQHVEGITAEELRQEHRAKGVPESLVEVLH
LAALADVRLLIFDADAPVLDGLTLYDDE
>gi|319762523|ref|YP_004126460.1| hypothetical protein Alide_1825 [Alicycliphilus denitrificans BC]
MDTQAIRAQMPTLVVGHVPSNVRSFKFNIFDGQPKVSTLGFHIDPQPFEGKVIATTDEAIVVKTGRAEFA
VLDKALVTDVPDEGAKVQVEPYARRRFDGLRADTPEESTEFTADGQPYTVKRLILGSAPAKLPIAEPQCP
ELQELIHQLEQLPAPDGFRRVTHLLVDADARDFTVVDPSPSNIIATPPAIGFTVASAKFQGQVTVLYERG
LDLYAVELRRDGELVERVDEVFFDTLGETLERLIDDGSWRFIRVQRLSGRKVVRH
>gi|319762524|ref|YP_004126461.1| mercuric reductase [Alicycliphilus denitrificans BC]
MAEAIAFHIDGMTCVSCAEHVRQALENVSGVRTASVSYPHRRAEIEADAGVSLDPLVAAVTALGYRARFS
DTPNKPAGLLDKALGRLGGETRRGGGEPALHVAVIGSGGAAMAAALKAVELGTRVTLIERGTIGGTCVNV
GCVPSKIMIRAAHIAHLRRGSPFDSGLPPTPPSILRERLLAQQQGRVEELRHAKYEGILESTPAINVLRG
EARFKDARTLAVATADGGKREVSFDRCLIATGASPAIPPIPGLADTSYWTSTEALVSDSIPERLAVIGSS
VVAVELAQAFARLGSHITILARNALFFREDPAIGEAVTAAFSAEGIEVLDHTQASQVAYADGEFVLTTGH
GELRADKLLVATGRAPNTRSLNLAAAGVEVNAQGAIVIDRAMRTSASHIFAAGDCTDQPQFVYVAAAAGT
RAAINMTGGDAALDLTAMPTVVFTDPQVATVGYSEAEAHHDGIETDSRLLTLDNVPRALANFDTRGFIKL
VAEAVSERLIGVQAVAPEAGELIQTAALAIRHRMTVQELADQLFPYLTMVEGLKLAAQTFNKDVKQLSCC
AG
>gi|319762525|ref|YP_004126462.1| mercuric transport protein periplasmic component [Alicycliphilus denitrificans BC]
MKKLATLIALAATLSTPAWAATKIVTLSVPGMTCEACPITVKKALSKVAGVQKAAVSFEKREAVVTFDDA
KTNAEALSKATANAGYPATVKQ
>gi|319762526|ref|YP_004126463.1| mercuric transport protein mert [Alicycliphilus denitrificans BC]
MSEPKNGRGALATGGVAAILASACCLGPLFLVALGFSGAWIGNLTVLEPYRPIFIGAALIALFFAWRSIF
RPARACKPGDVCAVPQVRTTYKIMFWIVSALVLVVLAFPYVLPLFY
>gi|319762527|ref|YP_004126464.1| hg(ii)-responsive transcriptional regulator [Alicycliphilus denitrificans BC]
MENASENLTIGAFAKAAGVNVETIRFYQLKGLLPQPKRPYGSIRRYGQADVARVKFVKSAQRLGFSLDEV
GQLLKLEDGTHCSEAAELAVHRLADVRARMADLTRMEDALSKLVSECDAHHGNVSCPLIAALHCC
>gi|319762528|ref|YP_004126465.1| hypothetical protein Alide_1830 [Alicycliphilus denitrificans BC]
MTTSTDKSYFDLHITGLGYLNRIREVKPKKGEAFWACGIAALNGPSDDVSYVRFDTRVSGSEAQHLVRRC
IQAVDAEKKVMIGFRLGDLWTDIFTYSKGKRAGEQGVSLKARLLFVSWIKVDGKLVYKAEPKPTDTDERD
PEVPVTSDAPATQQASAPESSEPVADAADDAADAPALAVAESF
>gi|319762529|ref|YP_004126466.1| hypothetical protein Alide_1831 [Alicycliphilus denitrificans BC]
MITIPGQLAIKTIHGRNGDFNVGRLATSIGEFVVKNAELDQYREGKYDGDFVIVEIRPSTYNANGRMVIE
IRAHLGGMTLSNIDALSRDEARRLSPQEVDPIDEEAQAPVPATPPAKPKAKPRSPRDPLVDTTPFGSEPA
PVSAAASAEADDAALFGSLWPLGETVKLDATVDRRVLRQQRDRLDKLGYEFAPLSQDWHLKAA
>gi|319762530|ref|YP_004126467.1| hypothetical protein Alide_1832 [Alicycliphilus denitrificans BC]
MGWTFVRQTRDQLIRELIAPQASERACCDVIDHTLDGDVLWTVVRVTARQAGVMGLAAGESVCYIGCHLL
ESSGGDWGYKSLDESAHPYYYSCPLRYLDMAPVQSSEWRERVHRFHAGRTV
>gi|319762531|ref|YP_004126468.1| hypothetical protein Alide_1833 [Alicycliphilus denitrificans BC]
MPAPSSAKPLYRIDECPDLMADGCVGDEQGNLVFLSIWARDTAVQEFLARLTLSRDEQGLDQFHVITEQG
ASIPVFVGNVENLEKRITRAYRRTLFGSLTNVWLFDRRCVKPDKANASALALLPRDSAHRLDRLWTLVQD
TCPLPLLDHWRDTMLELLQTRRMLTGLPLALGPLEGHRLALDVPALTKALGELIRNGTLGAAQYELAANA
PLRRVA
>gi|319762532|ref|YP_004126469.1| hypothetical protein Alide_1834 [Alicycliphilus denitrificans BC]
MALMFPRLARNFIRNGYFPTDEPTLERALSALAPSPGAMSLLDPCAGEGVAIAEAAHALGREQVQAFAVE
YDAERARHARQLVDRCIHGDLMDTLISRQSFGLLWLNPPYGDLSKDVNGNIGYQGQGRARLEKLFYQRAL
PLLQYGGVLVFIVPSYVLDAELVGWLTRHLKDLRIYRAVETQFKQVVIFGRRVRQRDQASESVKAVRGLL
LQIGQGDAEAEELPLEWPFLPYTVPASPAEPEHFYRVTMEPGQFADEVGRLQGLWPALDTHLGAAQQSLR
PPARALSHWHLALALAAGAISGVVKSKSGRVLVVKGDTHKEKTLQTEYTERDDGSVAETRILTDKFVPVI
RAWDLTLGSPTWGEVLTIR
>gi|319762533|ref|YP_004126470.1| hypothetical protein Alide_1835 [Alicycliphilus denitrificans BC]
MALAVLNLASQARFSPGQVVMTAGVDELVRQGRLNPTPYLRRHLHGDWGDLSDSDRRQNDAALKSGEDRL
FSSYQVTRDLELWIITEWDRSVTTLLLPSEY
>gi|319762534|ref|YP_004126471.1| helicase domain-containing protein [Alicycliphilus denitrificans BC]
MSLDLETVPETAVQGDLLEAAASPLTLSLQDFVSEFGDELLDSLNRANPPVYTGQVRVHRQLILAALKRK
LFPAQADVVHAVTELLVDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQ
ETVAGAKVWVLNGPDTLVKLLKLREQLGVPAQGQEFFVLGRVRMRMGFHWKPVFVRRRTPHGDVGACPDC
GHVITDLDGEPINPVALEAEESRRKCSHCRALLWSLIRPRGLSASDQSSTVLKALKRIPTIGEVTAQKLM
QKFGDAFLASMLGDNIHEFINLMDGNGELVFSDRQAHRMERAMANMEFGFGEGGYQPSEFIKRQLPQGTF
DLLIADEAHEYKNGGSAQGQAMGVLAAKARNEPPRVSRRPVGLS
>gi|319762535|ref|YP_004126472.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MKAYIDRHRDDYGVEPICRALQMAPSCYWRHAARQRNAQLRSARAQRDEGLKADIQRVWHANWQVYGADK
VWLQMNREGIVVARCTVERLMRAMGLQGARRGRAVRTTTPDTSAPCPLDHVNRHFHASRPNELWVSDFTY
VSTWQGWLYVAFVVDVYARRIVGWRVSRSMQTDFVLDALEQALYDRQPAAHALTHHSDRGSQYVSIRYTE
RLDQAGIQPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGI
PPAEAEANYWRQLAASDTSTKVST
>gi|319762536|ref|YP_004126473.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319762537|ref|YP_004126474.1| integrase family protein [Alicycliphilus denitrificans BC]
MALSDLAVRQAKATGKAYTLPDLDGLSLAVTAAGGRTWHFRYYWAGKQKRMSLGTYPEVTLREARGLRDE
ARVLLAKGINPRVHRKQKRTAVRLADENTFDAVYRKWLKHRGLSLKEGRQTTLSILPRIFDKDVLPTLGK
RSIYEIKRPDLLEVIAKIEKRRALSVAEKVRTWFNQLFRYALVIVPGLEQNPASDLDVVALPLPPVNHNP
FLRMAELPKLLQRLRSYRGRRQTQLGLRVLLLTGVRTGELRQATPDQFDLDRGLWIIPPDVVKQLQLDMR
KKRQQPKDIPPYIVPLSIQAMEIVRHLLDEFKPAQRHLFRHDSDLKKRISENTLNGALKRMGYQERLTGH
GIRGTMSTALNEIGYPKVWVDAQLSHVDPNKVSATYNHAEYVEQRRRMMQDWADRLDLFEQNQVEAASMP
LTVHLEGVPAFPSEQTASAPSTPVAASPILLVTKPGDAMPLVSAAAHRLPAVPPPRSAAPLVPSDIQRER
MELFDVFEAPHNLPVAAFAKMAGKSRRWISYEIKAGNLLALNVGNRGQRVPDWHLDPLKHELIQSVLKLT
RGADPWQIYHALLQPRSMLRGHSALEGVTASNLDKLVMAVSTAVKESEWTPPRVGVA
>gi|319762538|ref|YP_004126475.1| transcriptional regulator, rrf2 family [Alicycliphilus denitrificans BC]
MRLTTRGKLAVTAITDVALHSHGHPVALPGISVRQGISLSYLEDIFSALRRAGLVHSVRGPGGGYMLTRP
PQSLSVAEIVMASEKYMAHANDKAGNAAPSPSSDDMTADLWASFHSRILEYLQSITVADLLAQHRTGADN
AGSPAATAQPSQARPHHARESQLPSRNVPNSVFALGLRAG
>gi|319762539|ref|YP_004126476.1| hypothetical protein Alide_1842 [Alicycliphilus denitrificans BC]
MPRWLIAVLTLHILLGLGASAFGKTPTAPLSAQASARSIQTALMHQHTTAPQAQQTATADQASTDGYECS
LADTNPDLPDDQSIGLFDAGAGHAPCHCPMAMTTALSSPWLKKQPKRPRAGRMLHRA
>gi|319762540|ref|YP_004126477.1| hypothetical protein Alide_1843 [Alicycliphilus denitrificans BC]
MQASPAHPVTQEQPQAPWGWAKYFRMPVYKPGTRVRRAGSWETVSHVSLRRNDLAVFLVGYAEPVDPMDL
ELEPTVFTTVRVPERY
>gi|319762541|ref|YP_004126478.1| phosphatidylserine decarboxylase [Alicycliphilus denitrificans BC]
MSDRLAVLPQYLLPKQLLTSLAGRFASARAGGLTTAAIRRFVARYQVDMSEAAEPDIAGYSSFNDFFTRA
LRPGMRPLADAAATCPVDGAVSQLGPIERDQILQAKGHRYSTTALLGGDAQLAAQFQDGQFATIYLSPRD
YHRIHMPCDGRLLRMEHVPGALFSVNPTTARGVPGLFARNERVVCLFETLLGLMGLVLVGATIVGSVATV
WHGQVNPPRTRQPRRWDYQSQQITLRQGEEMGRFLLGSTVVLLFQNGAVEFNPDWAAAHPVRLGEAMAQR
PGAWTNSSAPG
>gi|319762542|ref|YP_004126479.1| cbs domain containing protein [Alicycliphilus denitrificans BC]
MPHEAEAPGPLTRRALAWLCLFMPARVRINQRERLRMVSGIVLSVAVVAVFAHWLGAASPMPWMMASLGS
SAVLIISLPSSPLAQPWPVLAGSALSYLVGVACAALVPNLPLACGLGVGLAVMLMLALRCLHPPGGAMAL
FAVLHPQEATLMAVVPVSFNVLVLVLAGMAFNHLTGRGYPHAQLRKLTQPKDSDSGAFTSADLDAALSHY
NQVLDVSRNDLEGLLHLAGKAAFQRTLGGLRCRQIMSMPVHAVAANTPLQEAWALMRKHAIKALPVVDAQ
RVVVGIVTMADFMRLANLEVHEGMGQRLRSLIMGRPKRPDQVQGLMSSPVLQVQADQHVMDLVPLFSEAG
HHHIPVVDEARQLVGIITQSDLVKALAAAVARS
>gi|319762543|ref|YP_004126480.1| translation initiation factor if-1 [Alicycliphilus denitrificans BC]
MAKEELIEMQGSVTEVLPDSRFRVTLDNGHQLIAYTGGKMRKHHIRILAGDKVSLEMSPYDLTKGRITFR
HLAGRGPGPGTSSGNR
>gi|319762544|ref|YP_004126481.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MTVMAALLMLCCIAAMQLVAAAGLTKAGPVHWLSLVSAAGLVVVYVLIRSGYSQRWEDPALTLFQISSSI
LCTAVAYVIMGAARGIVLPILAVILFFGMFGLTPRQMLAVLFYGSMVFGIALAIAQWSPEYGGQPLALTV
AYMVMIIVVLISCTFLNLRVLAARKKRNELTQAVASEHERAIRDEFTGLYNRRFMLEVMHIEGARAQRSQ
QPLLVAQLDLDHFKVINDTHGHAVGDQALCAFVRTVTECIRPTDTLARWGGEEFVLLMANTTVENGERLL
ERVRAAVQASPVVLASGAAIHLTVSVGAARLQAPQEMPVGLLRRADAALYAAKAQGRNRVAWADDLIEA
>gi|319762545|ref|YP_004126482.1| hypothetical protein Alide_1848 [Alicycliphilus denitrificans BC]
MPASSRHGERGAARYDLLDAWRGLAMLWMTVFHFCFDLSHFDYWPQDFRADPFWTVQRTLIVSLFLLCAG
LGQAVAWQQGVGWGRFFRRWGRIVGCALLVTAGSYAMFPRSFIYFGVLHGMALMLLVVRLTAGWGRWLWL
AGLLAVASPWLAAWALEGPLAGWARYFNGHALNWLGWVSRKPFTEDYVPVFPWIGVMWWGMACGQWLLAR
RAPWIAGPLPRAAAPLAALGRYSLGYYMLHQPVMIGALMLWGWLGRP
>gi|319762546|ref|YP_004126483.1| integration host factor, beta subunit [Alicycliphilus denitrificans BC]
MTRSDLVEELAARFGQLTQRDAEYAVKTILDAVSDALVRGHRIEIRGFGSFSVSHRPPRMGRNPRSGEAV
HIPEKRVPHFKPGKALREAVDQRSAKTAAQ
>gi|319762547|ref|YP_004126484.1| ribosomal protein s1 [Alicycliphilus denitrificans BC]
MSESFAALFEESLQRTEMRPGEVITAEVVRVEHNFVVVNAGLKSEAYVPIDEFKNDQGEIEVQVGDFVSV
AIGSIENGYGDTILSRDTAKRLASWLSLEKALESGEFVTGTTSGKVKGGLTVLVNGIRAFLPGSLIDTRP
VKDLTPYENKTMEFKVIKLDRKRNNVVLSRRAVVEASMGEERAKLMETLKEGAIVNGVVKNITEYGAFVD
LGGIDGLLHITDMAWRRVRHPSEVVQAGQEITAKILKFDTEKNRVSLGLKQMGDDPWMGVSRRYPSGTRL
FGKVTNIADYGAFVELEPGIEGLVHVSEMDWTNKNVAPNKLVSLGDEVEVMVLEIDEDKRRISLGMKQCR
ANPWQEFAQNTKRGDRVKGPIKSITDFGVFVGLAAGIDGLVHLSDLSWNEPGESAVRNYKKGQEVEAIVL
AVDVDRERISLGIKQLDGDPFTTFVTVNDKGQTVSGKVKTVDARGAEIDLGNDIVGYLRASEISRDRVED
ARNVLKEGDEVTAVVVNVDRKTRNIQLSIKAKDQADQQEAMAHLSAQSAKENAGTTSLGALLRAKLDNSD
K
>gi|319762548|ref|YP_004126485.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Alicycliphilus denitrificans BC]
MFSTAFLDLPPLASAGGTVQLPGSKSISNRVLLLAALSQGTTEVHDLLSSDDTRVMLDALRAIGCTVDEA
GGGRVRITGLGGPDGTLPRSPTKLFMGNAGTAMRPLTAALALLGGEFELSGVPRMHERPIGDLVDALRQL
GCRIDFLGNEGYPPLSIQHAAGLPALRLHEPIRVRGDVSSQFLTALLMALPLVAKEQDVVIEVVGELISR
PYIHITLELLARFGIAVRHEEWQRFTIPAGSRYRSPGQIHVEADASSASYFIALGAIAESPKGQKGIKIL
GVGQDSIQGDIRFVEAARAMGAQITGGPNWLQIERGSWPLRAIDLDCNHIPDAAMTLAVMALYAQGTTTL
RNIASWRVKETDRLAAMACELAKLGASVEEGADYLRITPPARPADWKSASIRTYDDHRVAMCFSLAAFNP
AGLPVRIEDPKCVAKTFPDYFEALFLVARADTALIPVICIDGPTASGKGTVAASVARQLGYHFLDSGALY
RITALAATRAGIAIDQAGEQRIADLARGLPVRFEGERIWLGQDDVTEAIRTEEAGMNASRVSALPAVRMA
LVALQHGFRRLPGLVADGRDMGTVIFPAAPLKVFLTASVECRAERRHKQLISKGISANIFDLRAQLEARD
ARDQSRAVAPLKPAQDALLLESSALTVEQAVAQVLDWWQARQPF
>gi|319762549|ref|YP_004126486.1| prephenate dehydrogenase [Alicycliphilus denitrificans BC]
MFEQLGLIGCGLMGGSFALAMKKAGLVQRVVGYSKSPSTTERARQLGVIDVEAPSALLAAAGADIVLLAV
PVAATEATLKAIKHLVTPQMLVMDVGSTKADVVKAARSALQGQLGSFVPAHPITGREVSGVEHADAGLYH
GRQVILTPTERTLTAQLRRAEDLWTQLGARVSSMSPESHDAAFAAVSHLPHMLAFAMLSSINAQPNANEL
LALAGPGFRDFTRIAASDPKMWRDILRANRDEVLAQSRLFKQALQGLEDAMQADSDQPLEDLITLASHTR
AHWRMGAQRGHKDA
>gi|319762550|ref|YP_004126487.1| chorismate mutase [Alicycliphilus denitrificans BC]
MSTTPQASPALADLRVQIDSLDHQLLQLVNQRARVAEQVGELKKREGTPFFRPDRVAQVIEKIQGANPGP
LKNAHVAAIWREIMSACLALESPQRVAVLGPEGTFCEQAAIEYFGGAADLMYCNSFDEVFHATAAGSAQY
GVVGVENSNEGVVTRSLDMFLHTPCHVVGEVSLLIRHNLLRSVNSAEGIEAVLAHPQALAQCHAWLAKHL
PHAERRPVSSNSEGARLAATNPAWAGISSERAAQQYGLHVVAHAIQDDAYNRTRFAIICLPHTLATPAPT
GRDCTSLIISVPNRPGAVHDLLVPLKKHGVSMTRFESRPARTGQWEYYFYIDLEGHPAEANVAAALAELQ
QLCAFYKLLGTYPVAA
>gi|319762551|ref|YP_004126488.1| phosphoserine aminotransferase [Alicycliphilus denitrificans BC]
MNRPYNFSAGPAAIPEEVLQQAAAEMLDWHGSGMGVMEMSHRGKEFIAIYEQAEADLRELLAIPPGFRIL
FMQGGGIAENAIVPLNLSRAATVDFVVTGSWSQKSRKEAQKYAAEVRTAASSEEGGFTTLPDPATWQLSR
GASYVHVCSNETIHGIEFQELPDLRALGCDAPLVVDFSSHVASRPVDWSRVGLAFGGAQKNIGPAGLTLV
VVREDLLGHALPICPSAFDYKIVADNQSMYNTPPTWGVYMAGLTFQWLKRQREGDATGVAAMERRNIAKA
KLFYDYIDGSQFYVNKVAANCRSRMNVPFFLRDESRNEAFLAGAKERGLLQLKGHKSVGGMRASLYNAMP
LAGVQALVDYMRDFERAAT
>gi|319762552|ref|YP_004126489.1| DNA gyrase, a subunit [Alicycliphilus denitrificans BC]
MVLHLKWLFPAVSTAVVMTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMH
ELNNDWNRPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAMRYT
EIRLAKIAHEMLADIDKETVDFGPNYDGSEKEPLVLPSRLPNLLVNGSAGIAVGMATNIPPHNLNEVVDA
CLHLLRNPESSIDELMEIIPAPDFPTAGIIYGIQGVKDGYRTGRGKVVMRAKVHFEDIDRGQRQAIIVDE
LPYQVNKKTLQERMAELVHEKKLEGISHIQDESDKSGMRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMN
MVALVDGQPKLCNLKELIEVFLQHRREVVTRRTVFELRKARERGHVLEGLAVALANIDEFIRIIRESPTP
PVAKAELMARSWDSQLVREMLTRTREDGGVVNADDYRPEGLEREFGMQESGLYRLSDTQAQEILQMRLQR
LTGLEQDKIVAEYKDVMAVIENLLDILAKPARVSTIIGEELSALRQEFGQTRLGARRSTIEHSAQDLSTE
DLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATATKEDDWIDQLFIANTHDYILCFSNRGRLYW
LKVWEVPAGSRNSRGRPIVNMFPLQEGEKINVVLPLTGEMRSFPADRYVFMATSMGTVKKTALDEFSNPR
KAGIIAVGLDEGDYLIGAALTDGEHDVMLFSDSGKAVRFDENDVRPMGRNARGVKGMQLEDGQSVIAMLV
AEDENQSVLTATENGYGKRTSITEYTRHGRGTKGMIAIQQSERNGRVVAATLVHADDEIMLITDTGVLVR
TRVSEIRELGRATQGVTLISLDEGAKLSGLQRIVENDANTAEADGADTAPAADDPH
>gi|319762553|ref|YP_004126490.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
MVTDDVPDSQHGCGFFPKRRTMKKLNKLAMLLASAVIATSAGAQVKAADGGKVIDNWQNGSGELVWKNGT
NELCWRDANWTPATAAEGCDGALVKAAAAPAPAPAPAPVAAPPAAPKPAPAVASKVTYAADAFFDFDKSV
LKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSIGTDAYNQKLSVRRAEAVKAYLVSKGIEKNRVYTEGKG
EKQPIADNKTKEGRAKNRRVEIEVVGTRTN
>gi|319762554|ref|YP_004126491.1| ubiquinone biosynthesis o-methyltransferase [Alicycliphilus denitrificans BC]
MNEFVNADPAELAKFSELAHRWWDPDSEFRPLHQINPLRLEWINQLSPLEGQKALDVGCGGGILSDSMAR
KGAEVTGIDLASKALRVARLHALEAQTPRVQYREISVEELAQESPGSFDTVTCMEMLEHVPDPQSVVTAC
AHLVKPGGWVFFSTINRNAKAFALAIVGAEYLLKMLPQGTHEYAKFIRPSELAGACRNAGLDVLQVRGMQ
YNPLTGRYWLSGDTSVNYMFAARRLST
>gi|319762555|ref|YP_004126492.1| phosphoglycolate phosphatase [Alicycliphilus denitrificans BC]
MKTNPFRAARAVLFDLDGTLIDSAPDLGAAADRLRTDRGLQPLPLQAYRPMAGAGARGMLEVAFGIAPDH
PDFPGLKDEFLANYERCIHDRTSVFDGVPELVDALTQRSLKWGVVTNKVTRFTSLIAQRVALFDSAGVIV
SGDSTPYSKPHPAPLLEAVFRLGLAAHECIYVGDDARDIVAGRAAGMSTVAALYGYLGSGALPQQWGADA
MIETPMDLLNLLGLD
>gi|319762556|ref|YP_004126493.1| hypothetical protein Alide_1859 [Alicycliphilus denitrificans BC]
MCNRYVAPDPAAIERHWQARASQPSVWAASIHPRAPGPFIRAEGGARALVVGQWGLIPFFAKMAKLPYST
NNARSEELAAKPTFRDPWKRGQRCIIPAVSFDEPCWETGKNVWWRFRRVDGAPWGLAGLWNTWADKATGE
LVESYTMLTLNADAHPLMRRMHKPEPDLLPDAQDKRSVIPIDADDVEQWLRGTVDEAQSLLRLAPVETFD
TGPVSAASHSSLL
>gi|319762557|ref|YP_004126494.1| peptidase s24/s26a/s26b, conserved region protein [Alicycliphilus denitrificans BC]
MHSIKAHPTDTRARLLGPAQIDAHVLRLPVGAVHVALGFPSPAEDFEDDRVDLNEMLVRNPPATFLYRAE
GWSMIQAGICDGDVLVVDRSVRPQHGDVVIAMWDGNAPVCKVLHVCGDHVELHGRNPAIASIVLPPDTEV
EIFAVVGVARQMRREHGRVGR
>gi|319762558|ref|YP_004126495.1| DNA-directed DNA polymerase [Alicycliphilus denitrificans BC]
MFALIDGNNFYASCERVFQPELRGRPLVVLSNNDGCAIARSDEAKALGVKMGQAIHQVAPDVRKQLAVRS
ANFALYGDMSARVLAILRDAAPRVEPYSIDESFLDLTGMRDREAFARELHERVHRWTGIPNCVGIGATKT
LAKLGNFVAKSSVRKPGSYPASLSGVADLAALSPQALAEVLTATPVGELWGVGPRWSARLRELGIATALQ
LRDAQRDLILERFGVVLSRTQRELSGDPCLALEEVEPDRQQIMVSRSFGERVENHQSISEAFATFAVRAC
EKLRARGLVTGAIGIFANTDHFRLELRQHHPQRTTDLPRATSDTRVVLDTLRRMQRGFLKDGFAYKKAGV
WLMDLGRPEQIQPDLFAPSTIGNDKLMSAMDAINRRYGRGTVGLGATGWRERPQWGMRQANLSLHFTTSL
RDLPRAHC
>gi|319762559|ref|YP_004126496.1| hypothetical protein Alide_1862 [Alicycliphilus denitrificans BC]
MSKKHRGRFEGESIVRHLPSPAGGVKLETFVPWRLVQRGVKKEVITPLDAPQAFREQAEAERQTRAAARD
TPMMRALGLAHHWQRLLDEQRAASVAEIAEAEGIDSSQVHRLMRLTLLAPDVVEKLVGQPGLTVEKVLGR
PWPYGWREQVRLLP
>gi|319762560|ref|YP_004126497.1| prophage lambdamc01, site-specific recombinase resolvase family protein, truncation [Alicycliphilus denitrificans BC]
MKDGQLETFVPMTLRRRGVQRLVQHPVVEEREAHDSALIEGVGRAFHWQRLLDTGEMESGSAIARSEGLH
QSVINELLRLTLLAPDIIEQLMAGRQPRRMSLIWFQRHPLPVDWEAQRAIVRGFEGPA
>gi|319762561|ref|YP_004126498.1| resolvase domain protein [Alicycliphilus denitrificans BC]
MAETASPKARKRCAVYCRVSSDERLDQEFNSIDAQKEAGHAYIVSQRAEGWIPVADDYDDPGFSGGNTER
PALKRLLADIQDGRIDIVVVYKIDRLTRSLTDFSKMVDVFERQSVSFVSVTQQFNTTTSMGRLTLNILLS
FAQFEREVTGERIRDKIAAAKKKGMWMGGVPTIGYDVVNRLLVINKDEAAVVRRMFEEMLTIGSPTQIAA
RLSDEGVTTKAWTTQDGRVRTGTRIDKKYIHKVLRNRIYLGELSNRGTWYPGAHQPIIEQELWDKVHAVL
ARNSHERGVDTKIRSRNDALLRGLLYAPSGERMYPTYSRKNGRKYQYYVSKSESRFGAPGKSYERLPAAE
IEAAVVAQIRTVLTSPESIASVVRHIQNNGGQVDEASTVMAMARLNDVWDQLFPVERHRVANLMIERVDL
VHTDEMQGIRVRWRELGWDTLIGEFAPRGVGAELLEVEA
>gi|319762562|ref|YP_004126499.1| hypothetical protein Alide_1865 [Alicycliphilus denitrificans BC]
MNENPSSIAAQISDLGHLPMAELWTLWDRYFERRPPHPNRTHVESRFAYKLQEQAFGGLAAETRQRLEAI
GAKHSRIKLRAKPRALNFAPGTVLLREWATRDHRVTVTAEGLFEYEGRCFKSLTAVARQITGQHRSGPEF
FGLLKGGN
>gi|319762563|ref|YP_004126500.1| hypothetical protein Alide_1866 [Alicycliphilus denitrificans BC]
MTTIELPSPSEMTPAARAAEVSSILAAAIVRTLVAPEATEGAVRLGFLPDQRVHATPSQPEKLS
>gi|319762564|ref|YP_004126501.1| helix-turn-helix domain protein [Alicycliphilus denitrificans BC]
MSFGQFIRKTREAKEIQMNDFARQLEISPAYWSRIERDMEKPPKDELIRKAAEILGISADDAFVEASRLP
PDIRDDVGNLVRMYRRNVTEKK
>gi|319762565|ref|YP_004126502.1| hypothetical protein Alide_1868 [Alicycliphilus denitrificans BC]
MAVLTLDYRCCNRKLPLYIKHAEVERIAATARQQLVVDSIDSVSFDALRQISGLKINGIDFALEVSTVDF
HAKLTHHFHRILTHPGS
>gi|319762566|ref|YP_004126503.1| 5-oxoprolinase (ATP-hydrolyzing) [Alicycliphilus denitrificans BC]
MDAVRTAIMSNRFNAIVEEASAAVYRTAHTTFVKLVQDYQCAVATVDGDMFAYPMLSGVNVFVGSPLKPT
LDAIGRENLKPGDIVITNDPFTTDGLVTHLMDITLLYPIFRDDRLIAIGWAFVHASDIGGAVPGSISPAF
TEVFQEGLRLRPVKLYEGGVLNTTVKAILADNSRIPGEVWGDIQAMISGLKSIDRRVNELCGRYGGQAVE
QAMQDVISYAESKARTAIASIPDGVYDFSDYLEGINDRQIAFFSARMTVSKGEIHLDFSGTDPQLPAAYN
LVSGASTHPYVVQCLYAFILTMDPLTPRNAGILRAIYSYTPRGTVLNAVFPASGGSRAASATRAYDVLLG
CINQALPEGLAAADSGNAGVIVVAAPDPRTGRDRVNVINTIHGGGGARRSRDGVDGTAVRYSQRSVPVEI
IEVETAMIMRAIRIVPDSRRAGRYVSGAALQMEIENTAHRAVMTVRNMNRFVFSAWGFRGGEHGVKGTAV
LNPGRPDERSIGKISVLELNRGDVIQITSPTGGGFGDPMERDLAAIASEIRNGMLSTERASQVYAVVFDE
HGQIDEVATAARRRERTRADTPEFTFCDERLRQDQVWPQDMRRQLAAMALTYDQRIRSQLVGTVHHRMMN
DGHQVDTKIIQQMVDDEAANMTGVRRLSV
>gi|319762567|ref|YP_004126504.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MLKDPQTPRYAQRRTHRTYTPQFKAELVAACRQPGASVAAVALQHGMNANVLHRWLKEWAQGFHRLEAGV
STAVVASPPPAFIPIDLSAVPPASAGELPSASLPTPADGIRIECQRPGMSVTVHWPLSGAAECAQMLREL
LR
>gi|319762568|ref|YP_004126505.1| is66 orf2 family protein [Alicycliphilus denitrificans BC]
MIRIDEAWLATTPLDMRAGTDTALARVIATFGAAHPHHAYVFANQRANRLKVLVHDGVGLWLAARRLHQG
KFVWAPAGSPNVALEHAQLNALVLGLPWQRVGSQGAISVV
>gi|319762569|ref|YP_004126506.1| transposase is66 [Alicycliphilus denitrificans BC]
MVIDEQALSELDAEQLREVTQRLLAELRHQRALNEKLTYECALLKRLKFAAQSERHSADQKSLLEDEIDA
DLAAVAVEIEQLQPPAAAPEAKQQPKRQPLPAHLPRREIRHEPESTTCACGCRMQRIGEDVAEKLDYVPG
VFTVERYIRGKWACTQCETITQAPVEAHVIDKGIPTAGLLAQVLVAKYQDHQPLYRQENIFGRAGLAIPR
STLAQWVGTCGARLQPLVDALKAEVLGHRVLHGDETPVAMLKPGSGKTHRAYLWAYAPGAFEATRAVVYD
FCESRAGEHARAFLGDWRGSLICDDYAGYKASFSQGVTEAGCLAHARRKFFDLHAAGKSQIAELALMQFA
RVYEIERQVQPLAAPERLQVRQQHSRPILDALHQWMVLQRQQVAGNSATAKALDYSLKRWAALTRFVDDP
QLPPDNNWIENQIRPVALGRSNWLFAGSLRAGQRAAAVMSLIQSARMNGHDPYAYLKDVLTRLPTHKASR
IEELLPHRWQPIDI
>gi|319762570|ref|YP_004126507.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MKAYIDRHRDDYGVEPICRALQMAPSCYWRHAARQRNAQLRSARAQRDEGLKADIQRVWHANWQVYGADK
VWLQMNREGIVVARCTVERLMRAMGLQGARRGRAVRTTTPDTSAPCPLDHVNRHFHASRPNELWVSDFTY
VSTWQGWLYVAFVVDVYARRIVGWRVSRSMQTDFVLDALEQALYDRQPAAHALTHHSDRGSQYVSIRYTE
RLDQAGIQPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGI
PPAEAEANYWRQLAASDTSTKVST
>gi|319762571|ref|YP_004126508.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319762572|ref|YP_004126509.1| sarcosine oxidase alpha subunit [Alicycliphilus denitrificans BC]
MFRKISPPSTPPLTLSIDGKSVTAERGETVASVMMRQADPSCRHTPVHGSSRAPFCMMGVCFDCLAIVDG
ASSTQTCLVPVAEGMCVERQLGRPKVAS
>gi|319762573|ref|YP_004126510.1| fad dependent oxidoreductase [Alicycliphilus denitrificans BC]
MQREYDVIVAGAGIVGAAIAYGLAGYDKRVLMLDGADRDYRAAKANFGLVWVQGKGYRYPEYHRLSAAAA
DAWPEFAAGLEAETGISLDYQTGSGLKFCLSDDELSARAKMLDAWEAETPELAPSVRILDRSELARRYPT
MRLGPDVVGASLGEQDGQVNPLRLLAALQAAFQRRGGMVRNGHPVTSIKPLAGGGFEVKTSEQTARAERV
VIAAGLGSVALGRMIGLDVPLHPERGQILVTERLAPVLPVPASGLRQTGEGTVMIGVTQEDVGYDLSTTS
AAAVRMTRKALRILPELGKARLVRQWSCLRVMTPDGYPVYASSQMYPGAEIATCHSGVTLASFHAGPYAQ
ALASGRHLQTLNAFPLERFNVSKNQSPQHTTADALH
>gi|319762574|ref|YP_004126511.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MSMKITLRHLEAFRAVMVRRTVTGAAEMLGVTQPVVTRLIADLEQRIAIALFTRDKGRLAPTPEATLLFA
DVNQSLMGIERIANAASGIKALKLGHLEIAAAPNMALSFLPRAIASFSLERPETLITMHMHSSSTVLDMV
QSGRCHLGFAMVPVHATRHGNSETLVSAKMVGVIPVGHLLATRKVLNPEDFEGESFISMAPLMETRMKID
SLMLSYGVNRRINVETQISSVVIRLVEAGAGISIIDPLTATGYTGDQVRFIPFKPDIVTDYSMVISPRNS
STLVLKPFIDHARREIRKMVPTHLIVRG
>gi|319762575|ref|YP_004126512.1| glutaminase, core [Alicycliphilus denitrificans BC]
MGHAALETLQGFLVGLDARMKRAHKRGRVAHYIPQLASVDVHQFGISVCLASGERLSAGDAATPFSIQSI
SKVFSLAIALGRHGDRLWKRVGNEPSNYTFNSVIELEQEGGKPRNPFVNAGALVTTDAMLDAPDAGCGLD
ELMDFVRTAAGDDRISIDEQVAASEYRTAYRNFSLAYFLRSCGNLHMECERLLQIYCRQCAITMNCEQLA
SAGRFLAGFDSAAHLLNPAQARSINALMLLAGHYDGSGDFAYSVGFPGKSGVGGGILAVVPGHASIAVWS
PGLNAFGNSLLGTRALQELSEFTGWSVF
>gi|319762576|ref|YP_004126513.1| amidohydrolase [Alicycliphilus denitrificans BC]
MTVQDTLQAVRAHEDEFIALRRDIHQHPELPFEELRTSDLVAARLRDWGYHVERGLGGTGVVGQLKRGDG
TRTLGLRADMDALPIQETTGLQYASRNQGVMHACGHDGHTAMLLAAAKVLAEQGDFSGTLNLIFQPAEEY
GTSDCGAVRMMNDGLFDKYPCDAIFSMHNMPGWPQGHLIFREGPMMASSDKVYITLVGHGGHGAVPHKAA
DPVVAAASLVMALQTVVSRNVDPLQAAVVTVGVLQSGRANNVIPDSAHLELSVRALDPEVRSLLQQRITE
IVHAQAQCFGVKAEIDYRRGYAALINSKDETDFARQIGTELVGAERVVPQAPPLTGSEDFAFMLEKRPGC
YLLIGNGDGDKLGACMVHNPGYDFNDANLAIGAAYWALLARRYLA
>gi|319762577|ref|YP_004126514.1| major facilitator protein family permease [Alicycliphilus denitrificans BC]
MGIQNSSMGDVALSPTSQGASNISTAATSKVQPRVVAATVAGNALEFFDFTTYAFFAVYIGQTFFPADEP
LVTVMLSVAVFGVGFITRPLGGLLIGAFADRAGRKPAMLLTIALITVGTIGMALTPSYASIGLAAPIIVI
ACRLVQGLALGGEVGPSTTYLIEIAPQGRRGLYGSWQLASQGIASLAAGIVGIVLTLALSKEQMLAWGWR
IPFLLGLALIPIAVFLRRHMPESLEQPTHSGPIKSPLADIRHHLRPIMLALMVILGVTISTYAAIYMTTY
AVTTLKLSATIAMSATIVFGVATWAGALLGGWLSDLYGRKPVMLWARVALFVLVYPAYMLLIEHTSVATL
ALATALLALLTGIGGAPTLVAIPELFPGHVRALGLSIAYAFGVALFGGTAQLVITWLIKVTDNPAAPALY
VLITSLIAIVGILLMRETGGDKELQK
>gi|319762578|ref|YP_004126515.1| regulatory protein lysr [Alicycliphilus denitrificans BC]
MNLRHLEYLLAVADTGSFSRAAERCHITQSALSRSIQTLEDDFGARLIDRMGKRNELTPFGQTVASRARR
MVLDAVELKRSAQLLQDGYLGVIRIGLGAGPTALLMQPFLRYMACMHPGVQVSLESGPPELQTRRLRERG
FDALVVDLRSVTPADDLLIEDLGQMRGGFICRVGHPLTKFNTPITFAHLQRYPLASTSLNPELARLLITR
YGPAADPQVAVTLRCNDINSLLHAVHGSDAVFLGLISPAREAIANGSLVELPITPALNEGARFAFVTLAD
RTEAPAMGIFRQFVAEHLHD
>gi|319762579|ref|YP_004126516.1| hypothetical protein Alide_1884 [Alicycliphilus denitrificans BC]
MRYPVMTEKHVADRWQVSLKTLRRWRLDGQGPIWHKLFRHVRYHEVDILEFERRSAQFLMTLLGIDREFK
PADEDVGAAFDAQGSRYLTAKDIAEAASLPLHIFQDRAERERKQIPHLMLGGNLRFSLQAILEPVPVVRH
QPGRQRRQQRLAIPLQPSSAQRWRLRPTCWACNTTASTSTLAFGSGLGMCRTSTPTSAACAAGCGASRAW
PPSTWRLTWAGFACWIARPDLPRSPRQCWFWLSGLELIRTFREKSLTFLLLLSKR
>gi|319762580|ref|YP_004126517.1| acetyltransferase, gnat family [Alicycliphilus denitrificans BC]
MSLDLVAPQPLTSDHHCIDFSCGEPVLDEWLKRRAMANQISGASRTFVAADKEHRVYGYYAMAAGAVSHQ
LATGSVRRNMPDPVPVMVLARLAVDTQAQGIKLGGSLLQDAVNRAVNVAQNTGVRALLVHALHERAKLFY
EYYGFQASPADPLVLMLRLSQAKP
>gi|319762581|ref|YP_004126518.1| hypothetical protein Alide_1886 [Alicycliphilus denitrificans BC]
MRAAAINLRALPEQRDLIDHAANLLGKNRSDFMLEAACERAQSVVLDQVHFTLDADKFQQFVDLLDAPPQ
PNTGLERLFALKPVWNKV
>gi|319762582|ref|YP_004126519.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MTSPDTPRWYFGWNIVAAATVLTTLTVGLRLGLGPLFLPMAEDLGFSRSMLSSIVAVGMLCYGAATPLAG
WLVARRGTRFVLLAGTVMLVGSTLWAVTARTPLQLLLSFGILMSIGAGFTSPVALTPVISRWFNRRRGMA
LFFLSTGSMAGIAIMTPALGLALQHASWQATLLGFAVLFAAITVPAALFLIRDEAPLDGDAPLPGAHRAA
NPVVPVGQHYTVLQAMRTSTFLKITLGMFACGFSMNLLGTHGMPMLMDHGFDATTSALGIGLIGLVAIPS
TLVLGRLADRLPRRKLLAAIYCVRGVGFFSLLLAGSTLELYGTSVIGGIAWAGSIALSSAILADVYGVRL
VGVLYGWTYVGHQVGAMISSWLGGWGYEHFGTHWLAFGLSGALLMMAAGVALLLPGRRPPLPAARATA
>gi|319762583|ref|YP_004126520.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MARTVQQLFDLSGKTALVTGGSRGLGLQMAQALGEAGARIMLSSRKAEDLEQAVAELQAAGIDARWIAAD
CAREDDIQRLASETLQRMGDVDILVNNAGATWGAPAEDHPLAAWDKVMNLNVRGYFLLSQAIAKHSMIPR
RGGRIINVASIAGLAGNPFEMKTIAYNTSKGAVLNFTRALAGEWGVYGICVNAICPGFFKTKMTTVLIET
LSEEKMATHAPLRRLGDDEDLKGITLLYASEAGKHITGQWLAVDGGVSAILGG
>gi|319762584|ref|YP_004126521.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MLDFGADIPFVKELGFTLRRMHGGESELHYQARPEHTNSFGVMHGGAVMTLLDVAMATAARSDTLDTGVV
TIEMKTSFMRPARGPMVARGKLIQRTRSMAFAEAWVYDAEGRLCSQSTGTFKYVPRAQPAAGQGGGAIST
D
>gi|319762585|ref|YP_004126522.1| alcohol dehydrogenase zinc-binding domain protein [Alicycliphilus denitrificans BC]
MPRNTQILLDNRPRGQASPDNFRLVVGDTPALRDGQVLVRHHYLSLDPYMRGRMNEGKSYAACQPLGEVM
IGGTVGEVAESYHPAYAVGDKVVGMGGWQEWSVVDGDAPGMLRKVDTRHVPLSYYLGAVGMPGVTAWYGL
VRIIDPRPGQTLVVSAASGAVGSAFGALAKARGCRVVGIAGGPDKCRYVTEELGFDACIDHRAHGDLASM
SKALKQACHDGIDGHFENVGGYILDAVLLRANAFARVALCGMIAGYDGQPLPLANPALILINRMRIEGFI
VSEHMEVWPEALAELGGLVASGRLRPRETIAQGLAAAPQAFLDLLQGRNFGKQLVKLI
>gi|319762586|ref|YP_004126523.1| glutathione s-transferase-related protein [Alicycliphilus denitrificans BC]
MTELILHHYPASPFAHKARCVLGFKRLAWRSVIVPSVMPKPDVVALTGGYRRTPFLQIGADIYCDTALIC
DVLEHLRPEPTLYPPHLKGVSRVFAQWADTMLFTAAMAYNLQPRAAEALFAGFPEGAAQAFSADRRAMGM
AHPHPQDAAAAYRSYLRRIANMVEEHDFLFGSEPCVADFAAYHPLWFTRQCVPVMADILSATPAVLEWMD
RLAALGQGRAEKLSAQDAITVAAGAVPQPLPPEVFQDEHGIALGSHVSIAAESFGTEPTVGLLVAATRTR
YTLARTDPRAGDLHVHFPRIGYVLRPA
>gi|319762587|ref|YP_004126524.1| hypothetical protein Alide_1892 [Alicycliphilus denitrificans BC]
MFECRFALVLCAALALPAAAAPRGDAGAAAPAQAAQPPALSVSPDGTLVIDQRARLAWPRCVEGMRWTGS
HCAGLARLLTYGEAQALARQRWKDSGVAWRLPRVNELRRLVNRSAQPPSVDQRLFPATPRDWHWTGTASV
NTGSVNPYAYGNVMRGGAGESSMTVQQSWAVDMASGQARGDVGRGTRLVVRLVRPAP
>gi|319762588|ref|YP_004126525.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MSARPGIGPVIDDGLAPSARRQAMLVIILGLTLAVLDTSLVNLALPDIARQLQSNAAQSIWVVNAYQLAT
LIVLLPLAALGERMGYRRVYLVGIALFSAASVGAMLASSMLALIVARALQGLGAAGVMAVNAALVRLIYP
RAQLGQGMAINSLVVATASMAGPSVAAAILSVASWPWLFAMNLPLGLGIWWLGRRALPANPPSEHDGPRF
SAIDVLLNGTMFTLIFLGGAQLGVRGQAQGAGGVAGGWLLAAGLAVGAVFLRRQWRLAAPLFPVDLLRIP
VFALSMGSSVGAFCAQMLGFLALPFLLLEAQGRSHLEAGLLITAWPLATALVAPLAGRMIGRYPDGLLGG
IGMAVFAAGLLSLGLLPAQPADWNVVWRMALCGAGFALFQSPNNHTIVSSAPLHRSGAASGMLGTARLTG
QTLGAVVLAAIFALRPGHDGSAESLALLLAAGCAFAAGVCSSLRVRA
>gi|319762589|ref|YP_004126526.1| deoxyribodipyrimidine photo-lyase [Alicycliphilus denitrificans BC]
MQQGATASALVWLRRDLRCDDHAALYHALRRFGRVYCAFVFDTDILDALPTRSDRRVEFIHASVLELHQG
LAELAARSGAPGGGLIVRHGPAPECIVRLARSLGVQEVLANRDYEPQAIERDRRVARALQAAGIAFSDYK
DQALLDRDEVLTRQGRPYGVFTPYRRAWLQRLDAFQLTPYPVASHARHLAAPPAGECLPTLQELGFARTN
LHELPLPTGMRGAQQLLQDFMPRMAAYHEARDYPGRKGVSYLSVHLRFGTVSIRQLAALAAAQAAQGCEG
AQAWLSELAWRDFYFMILWHHPQVATQSFKPVYDRVQWDDAPELWQAWCGARTGYPLVDAAMRQLHQTGY
MHNRLRMVVASFLTKDLGLDWRRGERHFAAHLNDYDLAANNGGWQWAASTGCDAQPWFRIFNPVTQSQKF
DPQGRFIRCYLPELARVPDAHIHFPAAMGPLELAACGLRLGVDYPLPVVDHARARERTLMRFHFLGASEG
G
>gi|319762590|ref|YP_004126527.1| hypothetical protein Alide_1895 [Alicycliphilus denitrificans BC]
MPAPAREESTLYAGEEYHRGGTRTAAQLRVSHLAPLMLYNALKLTHVLSIIVWIGGMVFAHLFLRPAAQR
LEPPQRVQLMHDVLQRFLGAVAVAIVVVLTSGLGMIGAVSVGSGGAFSMPLDWTIMATLGIVMMGIFAYI
YFALLSRLEQAVATSDWSAGGQALGRIRAWVGVNLLIGVVVVAQTVLM
>gi|319762591|ref|YP_004126528.1| 5-methyltetrahydropteroyltriglutamate/homocysteine s-methyltransferase [Alicycliphilus denitrificans BC]
MAATPVLTHTLGFPRMGAQRELKFALERHWRGEIDAAALEAVGAELRARHWQAQRDAGLAFVTVGDFAFY
DHVANHIQLLGCESARFGFAPDTPELARYFAMARGVQAQAHGAPGCGAGCTHAAHEGAGQSALEMTKWFD
TNYHYLVPELHAGTAFSLASERLFGEVAQAQALGHRVKAVLVGPLTFLWLSKEKGDTPFDRLALLDRLLP
VYAQILARLKTQGVEWVQIDEPILGLDLPAAWSQAFEPAYWQLGKAGPQVLLATYFSPLEDHLRLACQLP
VAGLHVDAVRAPHELTGVADWLPGYKVLSVGVVDGRNIWRTDPDAALALLRPVADKHQGPLWIAPSCSLL
HVPVSLAGEDALDAELRSWLTFATEKLGELGLLAALLDGRAGDGDPRLADARAAAASRRASARVHRPEVT
RRLAGAPEGADRRRAPFPARQAVQRTRLRLPLLPTTTIGSFPQTPAIRAARAAHRRGALDDTEYQARMRA
EIAHAVRTQEALGLDVLVHGEAERNDMVEYFGEQLDGFAFTQNGWVQSYGSRCVKPPVLYGDVARPRPMT
VDWTVYAQSLTPRPMKGMLTGPVTILQWSFVRDDQPRSRTCEQIAWAIRDEVADLERAGIGIVQIDEPAI
REGLPLRRAHWKPYLDWATRAFRIAACGVGDATQIHTHMCYSEFNDILPGIAAMDADVITIETSRSGMEL
LQGFGTFKYPNEIGPGVYDIHSPRVPGVDEMLRLLRKAAEVVPPGNLWVNPDCGLKTRAWPETEAALRNM
VQAAGALRAEHAGAGS
>gi|319762592|ref|YP_004126529.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MIQSILEIRHLRTLQALRDSGSLVRAAQLLNLTQSALSHQIKLLEDRYGTPLFERKSVPPQFSATGTRLL
QLADAVLPQVEAAERDVARLSQGQGGQLRIAVECHTCFDWLMPAMDAFRARWPEVELDIVSGFHADPVGL
LHQGRADLAIVSEVDAQEQGVDYHPLFGFEIRALLANTHALLAKPYLVAQDFADQTVITYPVPDEMLDLV
RQVLEPAGVRPPRRTTELTVAMLQLVASGRGVAALPLWAVQGYLDRGYVAARPIGTRGLRGELHAACLPQ
LSSRPFLQDFVRVTRETSFVTLKGVELL
>gi|319762593|ref|YP_004126530.1| hypothetical protein Alide_1898 [Alicycliphilus denitrificans BC]
MAASLAIHSRLHVALRIAAAVLGDYAFCWGFVARSLPRVWLVLAGAASLVQMGLA
>gi|319762594|ref|YP_004126531.1| hypothetical protein Alide_1900 [Alicycliphilus denitrificans BC]
MMMLRHHTLALALVLALAGCASHPPANPPSGTVSVTHADPAGFSEARNAPQESERARQAWIDALSQHLAE
RAARALPEGERLEVHITNIQRAGGFEPWRGPQATQLRMARDIYPPRIALEFKRLAPDGHVLETGSRTLRD
TAFMMRPDMYPSDPLRHEKALLDDWVRKELGGR
>gi|319762595|ref|YP_004126532.1| isocitrate lyase and phosphorylmutase [Alicycliphilus denitrificans BC]
MNTKQRLKQLVEARNGLIVPGAFNALSARVIADLGFQAIYVTGAGVTNMWFGMPDQGFMGLHEIAEHTAR
IRDAVDVPLIVDADTGFGNALNVVHTVRTLERAGADCIQLEDQVTPKRCGHFAGKEVISAEEAVGKIKAA
ADARRDPGFLIMARTDAAATHGFEAAVERAQKFAEAGADILFVEAVTRAEEVRALPQRLAKPQLMNMVIG
GKTPIFNAEQLGELGYGIVLYANAALQGAVAGMQKALTVLRDEKEVQESSGLVTPFAERQLLVGKPAWDA
LEKRYG
>gi|319762596|ref|YP_004126533.1| acnd-accessory protein prpf [Alicycliphilus denitrificans BC]
MSNSPQTRIPATYMRGGTSKGVFFNAKDLPPPGPQRDAILLRVLGSPDPYGKQIDGLGNASSSTSKAVIL
SRSTRPGHDVDYLFGQVSIDQPFVDWSGNCGNLSAAVGPCAIHLGLIDPARIPIHGNVTVRIWQANIGKT
IVAHVPIAGGQVQETGDFELDGVAFPAAEVPLEFIEPSDDSGAMFPTGNVMDTLEVPGVGTFQATLINAG
IPTIFLNAKDVGCTGTELQGDINEDKAALARFEAIRAHGAVRMGLIHDVAEAAQRQHTPKIVFIAPPASY
TASSGKRIAAGDIDLLARALSMGKLHHAMMGTAAVAIGTAAAIPGTLVHLAAGGGTRNAVRFGHPSGTLR
VGAEAAQANGQWQVTKALMSRSARILMEGWVRVPTPP
>gi|319762597|ref|YP_004126534.1| 2-methylisocitrate dehydratase, fe/s-dependent [Alicycliphilus denitrificans BC]
MTMNIRYRKRLPGTALDYFDAREAVEALAPGAWARLPYTTRVHAENLVRRADPAQLNDYLRQLIGRKREI
DFPWYPVRVVCHDILGQTALVDLAGLRDAIAKEGGDPAAVNPVVPVQLIVDHSLAVECGGFDPDAFAKNR
AIEDRRNEDRFHFIEWTKKAFANVDVIPAGNGIMHQINLEKMSPVVYVQDGVAFPDTCVGTDSHTPHVDA
LGVIAVGVGGLEAENVMLGRASWMRLPEIVGIKLTGRRQPGITATDMALALTEFLRQEKVVGAYVEFFGE
GADSLSIGDRATISNMCPEYGATAALFTIDPQTIEYLRLTDRSPEQVRLVETYARQAGFWHTDLQTAQYE
RVLAFDLSTVVRNMAGPSNPHRRLPTAALAERGIAAPWTEEPGRMPDGAVIIAAITSCTNTSNPRNVIAA
ALLARNASRLGLSRKPWVKTSLAPGSKAVELYLKEAGLLGALEKLGFGIVAFACTTCNGMSGALDPAIQQ
EIIERDLYATAVLSGNRNFDGRIHPYARQAFLASPPLVVAYAIAGTVRFDIERDVFAVVDGKEIRLKDLW
PSDEEIDAIVARAVKPEQFRKVYEPMFAIPARDDGARVSPQYGWRPQSTYIRRPPYWDTEGVGALAANPR
TLKGMRPLAILPDNITTDHLSPSNAILPDSAAGEYLARMGLPEEDFNSYATHRGDHLTAMRATFANPQLV
NEMAGRKGSLARIEPEGQVVRMWEAIETYLNRRQPLIIIAGADYGQGSSRDWAAKGVRLAGVEVVVAEGF
ERIHRTNLIGMGVLPLEFQSGTTRLTLQLDGTETYDVEGALTPRATLTLVIRRKNGELACVPMICRLDTA
EEVSVYEAGGVLQRFAQDFLAKSASSALYKSAISY
>gi|319762598|ref|YP_004126535.1| 2-methylcitrate synthase/citrate synthase ii [Alicycliphilus denitrificans BC]
MTATTTLTPPPKAKKSVALSGVTAGNTALCTVGRTGNDLHYRGYDILDIAEVCEFEEIAHLLVHGKLPTR
AELKTYKAKLKALRGLPGSVKTALEQLPAASHPMDVMRTGVSALGCALPEKDDHNIPGARDIADRLMASL
GSMLLYWYHFSNSGRRIEVETQDDSIGAHFLNLLHGDKPGAGWERAMHTSLNLYAEHEFNASTFTARVIA
GTGSDMYSAISGAIGALRGPKHGGANEVAFEVQKRYDTPDEAEADIRRRVEAKEVVIGFGHPVYTVSDPR
NVIIKGVARRLSIDAGSTKMYDIAERLESVMWEVKKMFPNLDWFSAVSYHMMQVPTAMFTPLFVIARTSG
WAAHIIEQRQDNKIIRPSANYVGPEDQAFVPIEQRR
>gi|319762599|ref|YP_004126536.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MTRPPGTVETKDMVFPQDANHHGTLFAGQGLQRLARAALVAAREAAGCEVVMAAVTGVQFLAPVPVGRAL
VLRAWIGRMGSSSLTVCVHGLAEAPGCAPELVLQGVFELVAVDAKGRPRAIAAAYLKPETT
>gi|319762600|ref|YP_004126537.1| hypothetical protein Alide_1906 [Alicycliphilus denitrificans BC]
MRKTFMGVRLRRLREERGLTQVALARALDISASYLNQIEQNQRPLTVPVLLKINAVFGVDVQRFSDDDEA
RLIAGLRDVLADMPAGAAADAVSLAEIRELAASMPAVARALLALHRGQREAHERLEALSAHYGDERGGAA
GAAHAPPMAYEEVRDFFFARHNHIAELDDAAERLAGQWRLAPGASEAGLRQRLERAHGVRVSLPAEGLPG
HGQDGAGEAMQRSFDAAARVLYLSPALRPAQRAFQMATQLAFLEVPQELQRIVDAAQLSGDAARALARIG
LANYFAGALLLPYAPFLQSAEALHYDIERLGQRWGVGFETVCHRLSTLQRPGARGVPFFFIRVDRAGNIS
KRQSATHFHFSKIGGTCPLWNVYEAFAQPGRIVRQLARMPDGRAYLWVARTVARSTGGWGAPGKTFSVAL
GCDVQHAPQLVYARGLDLADPDAPVPIGMGCKVCERTACPQRAFPPMGRALEVNENRSSLVPYRVA
>gi|319762601|ref|YP_004126538.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MAGNPINPARIDFTTLRLFCAVAQTGSITKGAERCHLALSAASRRMSDFEAASKACLMERTAQGIRLTPA
GHVALQHAMRLFQGFELFSNELSEYSSGSRGHVRLWANMSALVEFLPAALAGFLQRYPETRVEVEEQLTG
DIVRAVVEGMADVGIFVAGAPTHGLNVRPYRVDELVVLCSQAHPLAAHDRIGFRHCLAHDFVGLNRGSSL
LNTITTAAQEAGFPLRLRVQVRSFDAMCEMIAANLGIGVLPLGTCARKLGPWGLKVVHLDDAWARRQLLI
ATSANRTLSGSASLLVEHLAKA
>gi|319762602|ref|YP_004126539.1| glyoxalase/bleomycin resistance protein/dioxygenase [Alicycliphilus denitrificans BC]
MIHHLDHLVLTTADEQACIDFYVGLLGMTLETFGQGRKAFKFGGQKINLHVKGSEFEPKAHLPVPGALDL
CFIAARPLDEVIARIRERGVRIVEGPVRRTGASYPLRSIYLRDPDLNLIEISERAEA
>gi|319762603|ref|YP_004126540.1| hypothetical protein Alide_1909 [Alicycliphilus denitrificans BC]
MNRSMKSAAMAASLLALLGCAGAPIAPVAGQGPVAVAEIGSFHTGGRSVTLSGLPKKEVRFTPTSPPTLL
DPNGEFEVEQMYTQYVKLAPQSRRARYPMLMWHGGGLTGVTWETKPDGQPGWQMYFVAAGHDVYVSDAVE
RGRASWARYPEIFKSEPVFRTKKEGWELFRIGPADSYDSAASRHAYPDTQFPIAAFDQFMKQGVPRWVTN
DEPTLRAYDALVNKVCPCVITVHSQGSTFAYTLASRYPDKIKAVVGVEPSGALDPDKVDVAPLARVPLLF
VWGDKIRETPRWQSIQAPMKKMIAAVKARGGQVDEIDLPAQGIRGNSHMIMMDRNSDQVAALVQDWLVRR
GLATR
>gi|319762604|ref|YP_004126541.1| RNA-binding s4 domain protein [Alicycliphilus denitrificans BC]
MTTPPDSMRLDKWLWCARFYKTRSLAVEEIGKGRVTVNGQAAKAARELRAGDTVALRQGQVPRTVVVRGL
SNFRGPAPVAQQLYEETPESIAERARAAEARRLAPEPAASLREGRPTKRDRRSMDDLRHGWGDRWSASLD
DDGPPGKS
>gi|319762605|ref|YP_004126542.1| two-component sensor kinase domain-containing protein [Alicycliphilus denitrificans BC]
MTRQRSLRRQLLLGILLPTLLFIGLNTYSLYRQTLGALNTAYDRTLLASAKTISEQIDVRGYDERAELRV
IVPYAALEAFEADNQSRMYYRVSNLRGELVSGFGELPMWRGSIAPRPPYAALVDFYDASFRGRPVRVAAL
LQPVASPQGRGMAVIQVAETLELRHAAALQILRDTLARQALLVALVAAIVVLVVQRATRPVRQLSADLQA
RAEGDLSPIAAPAAPRELQPLIDATNAVMRRLSHLLEHQKRFVRDASHQLRTPLAVLKTQVQSALRGDMP
PGQALHEIGDTVERATQLANQMLALAKVEQLRQQGELPTMRLDEVLREVALDLSPLIAQGDLDFGIATDA
APIRAHAWMLRELCRNLLHNAIRHAPPATELAVTLRAQGTHAELTIADAGPGIDDELAARLFEPFSAGDV
RKGSGLGLAICQEIVQALGGSIALSNRRQGARVLGLDAVVRLPLAPA
>gi|319762606|ref|YP_004126543.1| response regulator receiver [Alicycliphilus denitrificans BC]
MQLLLVEDDATMQATLQRSLARRGMAVTALADGRAALAEWRAHPPDAVVLDLTLPGLDGLQVLEQARAGG
LRTPVLLLTARGTVGDRVLGLNAGADDYLPKPFDLDELEARLRALVRRSGDAMEAKSAASALAMGAISYE
KESGIIYAHGAPMDLTPRELALLRALLAQPGHAVTKERLYELVFPGQSEVQYEAIEVVAYRLRKKLAGTG
VVLMTLRGLGYLLKPEA
>gi|319762607|ref|YP_004126544.1| hypothetical protein Alide_1913 [Alicycliphilus denitrificans BC]
MRRDTFLKSLAALAAAGSLPLSAQAAVAIKMMLPANPGGGWDTTGRALGKALQDAGVASSVTYDNKGGAA
GAIGLAQFINGSKGDPNALMVMGAVMLGGIITGKPPVNLSQATPIARLTSEYNVFVLPANSPFKTMADVV
AQLKKDPGSVKWGGGSRGSTEHIAAAMIAREVGVDPAKINYVAFRGGGEATAAILGGNVTVGGSGYSEFA
EYITAGKMKPIGVTSPQRLKGLNIPTLKEQGINVEIGNWRGVYGAPGITAEQRKALTAMVEKAVKSKAWA
EAIQKNDWTPAWLAGDEFANFVDQEFASLRATMVKSGMV
>gi|319762608|ref|YP_004126545.1| hypothetical protein Alide_1914 [Alicycliphilus denitrificans BC]
MSELAPSSDPAAADAGSVPSPFWQAAVGAAVVLVAAGMAFGALQIPGDAGYGGVGPNFLPWVCAAVLGLC
GVLLIREALTGGYRQAADPGGAPRAALGPFAWVTAGLLLNAALIVDLGFILGCTLCYALAVQGLRRANGQ
TGRLAPRALAVDVLTGLAISAPVFWLFTQFLAINLPGLTNTGWL
>gi|319762609|ref|YP_004126546.1| hypothetical protein Alide_1915 [Alicycliphilus denitrificans BC]
MEIFDALMAGFATAISPANLLWALVGCALGTAVGVLPGIGPAVAVAMLLPITSKVDMTASMIFFAGIYYG
AMYGGSTTSILLNTPGETASMVTAMEGNKMAKSGRAGAALATAAIGSFVAGTVATVVVTLFAPSVAEFAV
KLGPPEYFMLMVLAFTTVSAVLGQSSLRGMTALFIGLALGCVGMDQISGAARYTGGKMELLDGIDIVLVA
VGLFAVAEVLYAALYEGRVEESQNKFTRVYMTARDWKRSVPAWLRGTLIGTPFGCIPAGGTEIPTFLSYA
TEKKLAKGEDKAEFGTKGAIEGVAGPEAANNATVTAALIPLLTLGIPTSNTTAVLLGAFQNYGINPGPQL
FSSSAALVWALIASLYIGNIMLLVLNLPMVGLWVKLLKIPRPQLYAGILIFATVGAYGMRQSTFDLFLLY
AIGLLGVLMRRFDFPTAPVVVGMILGPLAEAQMRNAVSIGEGSWWIFLQRPMSLALIVIVLAVLIVPRVL
RRWAERNLARHHQSADDIV
>gi|319762610|ref|YP_004126547.1| hydroxybutyrate-dimer hydrolase [Alicycliphilus denitrificans BC]
MRSNERMGLARWAMAALAGVALAACGGGSSRPSNDLPQGIKEISATVYPATVAGTGATAQTQDLLTGGIG
KTGLGAAAAPAYADPANPTAAELRRNALYSNYRGILDPMPGGGYGLLYGPNVTADGRVTAGEGLIPGREY
VAVLDDGSGRKQTVIAVQVPDSFSASNPCIVLGASSGSRGVYGAIGTAGEWGLKKGCAVALTDAGKGVGL
HNLADDTVNKIDGTRATRTAAGALGFFAAALSDAARAAYDAAFPNRIAIKHAHSQQNPEKDWGSDTLAAG
RYALYVLNARYGTVANPVPFTKANTLVIAGSASNGGAASLRAAEQDGDGLIDGVVASEPVTEMPATAGYG
IRFGGASVTGYGRTLAEYTTWGNIYQPCAALASAAALTEVSYYNFIGLAGMTARATARCDGLAAKGLVSG
ATTAERAADALAKLRAYGWTEDNDTMHNAHYGLGNGPILSAMYPMAYGRFGADANLCNTSFAAASPLTGD
VAAAAPAALAQSFATANGTANGAPATVIYNDSQGGAKAWQFAVSASTGVADFGLDNALCQHALVSGRNPV
TGAALTAASTPTKADSDKVRAGIAEVLHSANLRGKPAIIVAGRSDALVPVNNNARAYAALNRTIEGAASK
LRYIEVVNGQHFDAFLPLPGFDTRFVPLHPYFNQAMDAMWAHLKSGAQLPASQVVRTTPRGGAPGAAPAI
TAANVPPFVATPAAADQIGFSGTSITVPR
>gi|319762611|ref|YP_004126548.1| lipoprotein [Alicycliphilus denitrificans BC]
MNQKISLRTAATAAMVAAASLSMMACTATKPDTQAAPRADSTSLDTRVNAALERLYQTAPGSRDQVRRAK
GVLVFPSVIGGSFIVGVEHGRGVLRVQGRDRGQYSTTAASVGWQAGGQSRAVIYVFNTQEALDKFLASDG
WSAGVDATVAVGRVGASGSVDTNTAETPVTGYVLNNLGLEAGISLQGSKITRIRD
>gi|319762612|ref|YP_004126549.1| hypothetical protein Alide_1918 [Alicycliphilus denitrificans BC]
MTRHTTLRLVFWAALAAFLAWDWSSSKPVDLRLEPPLIAAGSGQAAAGGHCSMPD
>gi|319762613|ref|YP_004126550.1| hypothetical protein Alide_1919 [Alicycliphilus denitrificans BC]
MKRLPLAAVLAVFTGWLLWSVSARQAALFVVGLGLGAVLAGQRFGFTTGWRMLIEDKDASGVMGQLLLLA
LAAALAMPLLGHYPELTAALGPPSVSLLVGAFVFGLCMQIADGCGSGTLYKAGLGIPMNAAILPLFALGS
FLGSLHLGFWLDLGRSQPVGLVGQFGWERALLITLAALAAVAVAVGWYVRRASAAAGQAPRPLVVRKWMV
GAVLLAVLATLNLVIAGQPWGVVYGFGLWAAKLAQASGAADLAHNWFWSQPGNAARLHETVLMDVTSITN
IGILGGALWVSAGKPANARPLNGTQWAVALIAGLALGYSSRLAFGCNVGAMLSGISTGSIHGWIWVPLAF
AGTIFGLRIRRHFGF
>gi|319762614|ref|YP_004126551.1| rhodanese domain protein [Alicycliphilus denitrificans BC]
MKKLFAIAVFAAAAHAGWAAQPLLTPAELSAQTAQPTPPRVIDIRDPASYGAQHIPGAVNAPYGKWRGPA
SNPGELPDTPKLTELVQSLGLTPGTHAVVVSTGSDTTDFGAAARVYWTLKLLGLKELSILNGGMKAWSDA
KLAQDAAVPQVARSAYQPQIDASLLATRDDVGQHVQLNNAALVDSRPDAFYQGKVRAPAAKLAGTLPGAQ
QLDFNQWFVPGTTTFVDKATAQKIAAKVKREQGQDMVAFCNTGHWAATDWFGLSEIAGLPGVKLYAGSMV
DWTQSKDAPPMANQPSRFEALAYDAKQWWERKTK
>gi|319762615|ref|YP_004126552.1| ferrochelatase [Alicycliphilus denitrificans BC]
MPSPATAILLCNLGTPDAPTAPALRRYLAQFLSDPRVVEIPRAAWLPILHGIILRTRPAQSAAKYQTIWT
PDGSPLAVWTNKQAVMLRGWLGEAGAQVQVLPAMRYGRPAIGAQLQALQAEGVKRVLVLPLYPQYSGTTT
ASVVDDVAAWTRRQRHFPELRFVNDYHDDPGYVASLAASVRAHWQREGGPADKLVMSFHGIPERNVRLGD
PYADQCRTTARLLAEALGLAPEQYQLTFQSRFGKARWLEPYTEPTLVALAQAGTRRVDVMCPGFTGDCLE
TLEEINQEARHAFLQAGGQEFRYIPCLNDSHAWITALSRIAQRHLAGWPDM
>gi|319762616|ref|YP_004126553.1| had-superfamily hydrolase, subfamily ia, variant 3 [Alicycliphilus denitrificans BC]
MLHRLMTNAHTLDLPRIRAITLDLDDTLWPVWPAISRAEAALAGWLAAHAPATAALFSDAQALRAIRQRM
ETLRPDLRHDLSALRRESIRMALAQAGDDPLLAEPAFEFFFAERQRVDLFDDALAALDFMATRWPVVAVS
NGNADVHRIGIGRYFKASLSATQLGVAKPDARIFHAGAQAAGVAPGQVLHVGDDALLDARGALDAGMQAA
WLNTVGADWPHEGAPPHATVPSLSALCRLLA
>gi|319762617|ref|YP_004126554.1| atpase, p-type (transporting), had superfamily, subfamily ic [Alicycliphilus denitrificans BC]
MRSRMPTTTPTEHRDTPWHALPASAIAERLATDARYGLPHAETALRLARHGPNRLPAPPRRPAWRRLLAQ
FHNMLIYVMLASAAITGALGHWIDTGVLLGAVVINAVLGFVQEGKAESALDAIRRMLSPQATVLRGGERQ
LVAAEQLVPGDIVLLASGDKVPADLRILSAKSLRADEAVLTGESVPSDKSEAAVAEDAPLGDRHCMLYSG
TLVAAGTAVGAVAATGTRTELGRIGALLAQAEPGTTPLLSQIARFSRWLAAAILLFVAVTFVIGVLWRGQ
APSDMFMMAVALAASAIPEGLPAIMTITLALGVRRMAHHHAIIRHLPAVETLGSVTVICSDKTGTLTCNE
MTVQRAVTADRVYEVTGSGYAPQGGFQVGGMNASPAADPVLQSMARVALLCNDSALNHGAEGWTLTGDPT
EGALLAFALKAGLDGAATHAALPRIDAIPFESEHRFMATLHHDHAGHALILVKGAPERVLDMCSTQSALQ
HGEQGCAPLDHDYWRRAANDCAARALRVLAIAAKRVPAQQHALSWDDMEGGFTLLGILGSMDPPRPEAMA
AVAECHAAGVRVKMITGDHGETARAIGAQLGIGLERPALTGAEIELMDDGALREVVDSVHVFARASPEHK
IRLVQALQARGEVVAMTGDGVNDAPALKRADVGVAMGRNGTEAAKDAAAMVLADDNFATLGAAVREGRGV
YDNVRKFILFMLPTNGGEALVVFFAIAFALQLPLTAAQVLWINLVTSGTLGLALAFEPTESDVMRRPPRD
PRESLLSGPFIWRVVMVSLLMAGASLGLFLWELSRGSSLETARTMAVCAVVAAEMFYLFNSRHILRSALT
REGLLGNPQVLMAIAACALLQLAFVHAPWLQAVFGSTDLSPGEWLRVLLSGAVVFAAAELEKWAMRRSRS
TPAADTAR
>gi|319762618|ref|YP_004126555.1| alpha/beta hydrolase fold protein [Alicycliphilus denitrificans BC]
MYVDVNGARTYCYTGGKPLEPGRPTVVFIHGVLNDHSVWALQSRYLAHNGWNVLAVDLPGHSKSAGEAPA
SVEQAAGFVVALLDALGIQRAALVGHSWGSLIALEAAARLGARASHLALVGTAYPMKVSPALIESSLHEP
EKALRMVNTFSRSTLAPPLGAGFWVYGAGMALGRRVLRSNPQVNVFHRGFVACDSYAGGEQAIAAIQCPV
LFVLGTLDQMTHPKAAQGLIQAARAAGRQVQVAQLPVGHHQMSEAPDETLLALRDFLT
>gi|319762619|ref|YP_004126556.1| o-acetylhomoserine/o-acetylserine sulfhydrylase [Alicycliphilus denitrificans BC]
MPGYTDPGFDTLALHAGARPDPATGARAVPIHLTTSFVFDSSDHAAALFNMERPGHVYSRISNPTNAVLE
QRVAALEGGVGAIATASGQAALHLAVCTLMGAGGHIVASTALYGGSQNLLNYTLRRFGIETSFVKPGDLA
GWRAAVRPNTRLFFGETVGNPGLEVLDIPAVSQIAHEAGVPLLVDSTLTSPWLIRPLEHGADLVYHSATK
FLSGHGTVIGGVLVDGGSFDWEASGRFPELTQAYDGFHGMVFAEESTVGAFLLRARREGLRDFGACMSPH
TAWLILQGIETLPLRMERHMRNTERVVQFLASHPFVARVGHPLLESHPGHQLAQRLLPRGAGSVFSFDLK
GSRGQGKKFIEALKLFSHLANVGDCRSLVIHPASTTHHRLDDEALAAAGIGQGTIRLSIGLEDAGDLIDD
LQRALKAAEKAGA
>gi|319762620|ref|YP_004126557.1| cbs domain containing protein [Alicycliphilus denitrificans BC]
MKVSDILRLKGNTLYTVHPDEPLACAVQTMAERDIGSLVVMEHGDLVGMLTFREVIQVLVKNGGSVGTML
VRSAMDDAPLTCTLETDMDEVRRMMLGQHARYMPVMDKRMLMGVVSFYDVAKAVVDSQNFENKLLKAYIR
DWPQEESPPAN
>gi|319762621|ref|YP_004126558.1| chorismate synthase [Alicycliphilus denitrificans BC]
MSGNTLGTLFCVTNFGESHGPAIGCVIDGCPPGMALCEADIQADLDRRRPGTSRHVTQRNEPDAVEILSG
VYEGRTTGTPIALLIRNQDQRSKDYGDIAQSFRPGHADYAYWHKYGLRDPRGGGRSSARLTAPTVAAGAV
AKKWLAETYGTRFRACMAQLGELPIPFENWEHVPNNPFFAPVADVQAYEDYMDALRKSGDSCGARLRVQA
TGVPVGLGEPLYDKLDADIAHAMMGLNAVKGVEIGAGFASVAQRGTTHGDSLTPQGFAGNNAGGVLGGIS
TGQDIEVQLAIKPTSSIISPRESIDVHGRSTEVVTRGRHDPCVGIRAAPIAEALLALVLMDHALRQRAQC
GDVRQAVPPIPASI
>gi|319762622|ref|YP_004126559.1| ATP-cone domain protein [Alicycliphilus denitrificans BC]
MKCPFCSHQDTQVIETRVSEDGDCIRRRRQCGACEKRFTTYERPEVNFPAVVKKDGRRVEYDRHKLLGSF
KLALRKRPVSTVQIDSAIERIEEKLLHLGQREVISSRIGELVMRELKKLDKVAYIRYASVYRSFEDIDEF
RALVDEVRK
>gi|319762623|ref|YP_004126560.1| glycine hydroxymethyltransferase [Alicycliphilus denitrificans BC]
MYQRNILVEQTDPEVWAAIQAENRRQEEHIELIASENYASPAVMAAQGSQLTNKYAEGYPGKRYYGGCEN
VDVIEQLAIDRIKQLFGAEAANVQPNSGSQANQAVLMAFLKPGDTILGMSLAEGGHLTHGMALNMSGKWF
NVVSYGLNEKEEIDYDAFEAKAREHRPKLIIGGASAYALRIDFERMARVAKEVGAIFWVDIAHYAGLVVA
GEYPNPVPHADVVTSTTHKSLRGPRGGIILMKAEHEKAINSAIFPGLQGGPLEHVIAAKAVAFKEALSPE
FKAYQQQVAKNAKVFAETLTQRGLRIVSGRTESHVMLVDLRAKGITGKAAEAALGKAHITINKNAIPNDP
EKPMVTSGIRVGTPAITTRGFKEEETRITANLLADVLENPDDEAHLAAVRAKVNALTSRFPVYR
>gi|319762624|ref|YP_004126561.1| lytic transglycosylase catalytic [Alicycliphilus denitrificans BC]
MTASGKVIAGVRTVIADVVNGLLEVTHNGFALLGLVVVFAAVTLTARPDLRQIGEDELRGWLHARQVAED
GFPLEPAASDRAMAINPSELPREQAAVAYWLSKKYRVAPEPLAALVTEAYEIGSRTKLDPTLILAIIAVE
SSFNPFAQSAVGAQGLMQVMTRVHTDKYEGFGGQLAAFDPVANLRVGVKVLQECIARAGSLEGGLRYYVG
AANLPDDGGYVAKVLAEHFRLRQVAGERKAAKPVLSTKAPAAPETAQPAGEKVALLDGGL
>gi|319762625|ref|YP_004126562.1| hypothetical protein Alide_1931 [Alicycliphilus denitrificans BC]
MIGYRVSQVIQTIKHHRWARRAAWLLACLLGLWLLAWLVVPPVARSQIERHASEALGRKVTVSKVEFLPW
TLEATVHGLSIASEDGKASQVQIARIYIDAELQSLWRLAPVIDAVQVDEPVIHVTQTAPGHYDFDDVLDR
LAQQPKTRDGEARPLRFALYNLALRGGALDFDDRTVGKVHMLRGLRIDVPFLSNFSADREVKVTPRLAFE
LNGSAFDTAAQTTPFAQNRQTEVNLHVDGFDLGPFSGYIPSRVPVRLKSGVLDADLKLGFEQEDATPRLT
ISGGVRLHGVRTTDAAGEPLLDFDALQVALKDVRPLQRIVDVDAIDWHGVHVHLRRDVAGAVALPGLAQP
ADGADATAKPTPAPQDAAWQVRLGRVGLHDGVVDWTDASLPGGKAAWKAENLQAEAWAVALPFQQPLQFR
LSTQLSGGAAKGDAARLAVQGQATDVQAQAAVSVRGLSMAMAAPYLAGVLKPSLAGMLDADLGLARNGDA
MAAKVATLSLGKLALDCAAAEKKCRTLRTAGIADAAKTSLAEAGRLEVSDVLVQLPQRSVTLGRVLVKQP
RVLVSRAAKGGWMFEEWLPDAPEAASKGKPAAAAPAPWKLKLAALEVEGASLAFRDDAAARPVALNASGL
QLRARNFSYDDGRITPVEVHLDARVAAGRAEPGRLSYEGTVAMAPALAVQGRVRAQHVPVHAFEPYVTSD
LNVDILRAEGSFAGDLRYVQETAGPAVSVAGDMSLDEVRVRAKDDVAADDEGKGGRRIADRGEELLRWKS
LGLRGVAVNLKPGRPLALDVRETALSDFFARIIVHENGRINLQDIRKGAATEEVAAAPPKDAAAAAVTGT
AQAAAQPADPMAPVIRFGPVALTNGSVHFSDYFIKPNYSADLSELTGRLSAFSSVPSEAGGEPQMAELEL
RGRAQGTASLEVSGKLNPLAKPLALDIQARMRDLELPPLSPYSIKYAGHGIERGKLSMDVAYKVQPDGQL
TATNKLVLHQLAFGDPVEGAPASLPVRLAVALLADRNGVIDVDLPISGSLNDPQFSLGGVILKVIGNLVM
KAITAPFSLLAGVFSGADEQGSIAFAPGSAALDDKARQQLDKIAQELNNRPALKVTVAGWAQPQAEEEAW
KRLRLRDLVQAQKRRAAVRAGESAADVAPVSDAEYPALLKEAYRRADMKKPRNLVGLAKDLPQGEMEALL
LKSIEVPGNAMQDLALARGVAVRDYLASRQVALDRLFVGASKLQPAGEGGWTPKAELTLAAR
>gi|319762626|ref|YP_004126563.1| hypothetical protein Alide_1932 [Alicycliphilus denitrificans BC]
MSDAPEATPVQNKTSEPHPLDALTGGAFSAATSGERSARIREWLATQPATDKLQEVFKELSARDKGAARA
VRERLDEIRRAQGQAAVAAEWTAKAEALLATAQLNIADALAWQRDAAKAGAPLSREPLSTLKAQLSERVK
TIEDLQHRVQVQREAAVLLAQRIEVLSTKPWKDAQAALELLSADVGHWQEQAQELTGDAAWPSVDVRFPA
QLESSRTQLLVVWEAFQSALAQTAAAAEDENAPLPPVPVWADELRLARGLPAEAAAAKAAPRAAAKPKVD
PEVREKAMQAVREALSKLEEETAQGHGKASVGAATALRAVLKVHGKLIDAELERKVHAALVAAGELEGWQ
RWSADQLREDLVARAEALLQRPEGQALGGRKMQESLRQLREQWKQADQGAPANHALWKRFDDACNAAHKV
VEAWLERVRAEGAEHRAQRMALVEEVKAWAQEQAGAAAADWRAVNRALYQFAERWRAGGHVSEKVFAELQ
PLWKQAMALAAAPLESAQKASLERRQAMIEEAASLGAAASLRIDAIKALQQRWQAEAQSVPLDRKQEQKL
WDAFRKPLDEAFNRKSAERERSAAELSARDRAVLDASKALEAANASNDAQRIREAVAALEAALKDQEGAG
ALGQKQPVTQEGQAQEAMDSGVNEANAKPVPAAAARPVVAVRGDDRPGMRRSEPAPQARAGRAAGDRREG
RDGRAPRDAAPRGPRLGDTAFRAQRDAMEHAQLALRKLAAQAHGEALTRLMTAWKSRDAAQVPSVQELGG
KVSAGVRSSWAQAIGAPAGAAAEQALLRLEIAAELPTPAEQLAARRAMQLQMLTRRNEPAPAETWGQDAA
LVFAGASDEASARRLQGVLKVLLRK
>gi|319762627|ref|YP_004126564.1| ribonuclease r [Alicycliphilus denitrificans BC]
MYSKKKYAGASATQISSSDEIEGTVQGHRDGHGFVVRDDGEPDIYIPPNEMRAVLHKDRVRVRIVRQDRR
GRPEGRVVEIVERPPQPIIGRLLQESGVWLVAPEDKRYGQDVLIPKGATGAAATGQVVVVELTEPPALFG
QPVGRVVEVLGEVDDPGMEVEIAVRKYGVPHEFSEACLAQAKALPDKVRAQDKRHRVDLTDIPLVTIDGE
DARDFDDAVYCEPAKIGRTKGWRLLVAIADVSHYVETGSAIDVDAYDRATSVYFPRRVIPMLPEKLSNGL
CSLNPHVERLCMVCDMLVTAKGEVHAYQFYPAVMLSHARFTYNEVAAVLANTRGPEAARHEERVEDLLNL
HDVYRALLAARQARGAVDFETTETQIVCDDNGRIEKIEPRVRTEAHRLIEEAMLAANVCSADFIAQAGRP
ALYRVHEGPTPEKQEILRAYLKAMGVGMSIGDEPRPQEFQAIAEATKDRPDAQQIHTMLLRSMQQAIYTP
INSGHFGLAFEAYTHFTSPIRRYPDLLVHRVIKSILAGTKYMLPALPTPGEAQFKLAKRLASKAAEPTIR
PAKAGAASVRETQAWEAAGLHCSANERRADEASRDVEAWLKCQYMREHLGEEYSGVVSAVTSFGIFVTLD
ALYVEGLVHITELGGEYFKFDEARQELRGERTGIRYAIGARVRVQVSRVDLDGRRIDFRLVDEAGDVVPG
KSSKAREPGKHQPHEKGRDQRMADARPFDKAGGLRRSKDQAPPSGGKKQGSGKSGHKGRRSRG
>gi|319762628|ref|YP_004126565.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MSDTTKIAIVTGAGTGIGKAAALALLRDGWSVALAGRREQPLLDVAQQARAGERALPVPTDVADPEAVRH
LFDRTVDRFGRVDLLFNNAGVGAPAIPLEDLSVQQWKTVVDINLNGMFFCIQNAFRVMKAQSPRGGRIIN
NGSISAHTPRPNSIAYTATKHAVMGMTKTASLDGRKYDIAVGQIDVGNAQTELAQRMTQGVQQANGQIAA
EPLMDVAIVGQSVLYMANLPLEANVMFHTVMATKMPFAGRG
>gi|319762629|ref|YP_004126566.1| cytochrome c553-like protein [Alicycliphilus denitrificans BC]
MRPRVLACTACHGKEGRATPGGYFPRIAGKPAGYLYNQLLNFRDGRRSYPQMSRLLEHLTDDYLREIAGY
FSALDLPYVSAAPVPASQALIERGRQLVRHGDEGRKIPACVQCHGDAMTGVAPFVPGLLGLSREYVGSQL
GAWQTGQRRAQAPDCMAEIARQLTVEDVGAVSAWLAAQAVPGQGKPAMSFKGELTMPCGSVRPPHASAPA
TGRGAR
>gi|319762630|ref|YP_004126567.1| gluconate 2-dehydrogenase (acceptor) [Alicycliphilus denitrificans BC]
MSVARVLLGWAVGCVVLAVAVGGGVVALNRLDEAALPADDAPLPATSEAIARGEYLARAGNCMSCHTRQG
GPAYAGGRAIDTPFGAVHASNLTPDDATGIGLWSAGEFWRALHNGRSRDGRLLYPAFPYPSYTHITRADS
DAIYAYLRSLPPVEQPNRPHALRFPFNTQVALAAWRALFFRPGVLLEQPARSAEWNRGAYLVLGLGHCAA
CHTPRNALGAPRADAAFRGGLIPVQNWYAPALTSPHEAAVGAWPVEEAVALLKTGVSPQATVSGPMAEVV
FRSLQYLDDADLRAIVLYLRSLPQEDGPAPPTARPSGAVMEKGRDIYRQQCVQCHGEQGEGRRGAFPTLA
GNRAVLLADTTNLVQVVLRGGYLPATAGNPRPHGMPPFTQSLRDEEIASVLSYIRNAWGNEAAKVDTIDV
YRARERRGS
>gi|319762631|ref|YP_004126568.1| thioredoxin domain-containing protein [Alicycliphilus denitrificans BC]
MGMGSAAAPSSAHLPSSGPWWVVCLCAQWCGACREYRGVFEELAGDWPQVRFEWVDVEDEENVVGEVDVE
TFPTILIADGQVARFLGPVLPQAQVLGRMLQGMRGDPGAPAADAQAQALFRRIAASR
>gi|319762632|ref|YP_004126569.1| hypothetical protein Alide_1938 [Alicycliphilus denitrificans BC]
MALQQIVEQTVAGLGYDLVEIERSAGGLLRITIDLMWAPPADGGEVQATGQFVTVEDCEKVTRQLQFALE
VEGVDYKRLEVSSPGIDRLLRNEQDFTRFEGEVIDITLKEPLGAAAGGQVAANRKKFRGTLERVPAGGWQ
IVWSDEPPVKPGQRVSKKRVPAPLQALGFTLDELREARLAPIVDFKGRGARPGAAG
>gi|319762633|ref|YP_004126570.1| transcription termination factor nusa [Alicycliphilus denitrificans BC]
MNRELLMLVEAISREKNVERDVVLGAVESALAQATKKLYQGDVDLRVSIDRDSGDYETFRRWLVVPDDAG
LQNPDAEELLMDARERVPDIEVGEYIEEPVESVPIGRIGAMAAKQVILQKIRDAEREMLLNDFMSRGEKI
FTGTVKRMDKGDLIIESGRVEGRLRRSEMIPKENLRNGDRVRAMIMEVDLTLRGAPIILSRSAPEFMIEL
FRNEVPEIEQGLLEIKSCARDPGSRAKIAVLSHDKRVDPIGTCVGVRGTRVNAVTNELAGERVDIVLWSD
DPAQFVIGALAPANVQSIVVDEEKHAMDVVVDEENLAIAIGRGGQNVRLASELTGWKINIMDAAESAQKQ
ADETDAARRLFMEKLDVDEEIADILIAEGFESLEEVAYVPLQEMLEIESFDEDTVNELRVRAKDALLTME
IAREESMGSVSQDLRDLEGLTPELIAKLADAGVNTRDDLADLAIDELTELTGQSAEDAKALIMKAREHWF
TGQE
>gi|319762634|ref|YP_004126571.1| translation initiation factor if-2 [Alicycliphilus denitrificans BC]
MSSNTVAEFAAELKKSPETLLDQLKSAGVAKSTATDLLNETDKQKLLAYLQASHGTAAGDRKKITLVKKS
TSEIKQADATGKARTIQVEVRKKRTFIKREDDAGAASESAVPSRSVEDLELARREEEARRQAELISRQEE
ELAAARREREAREQREREAEERAAAYAAQQAEKKAQESAEKQEAQREAAAEAEARANAQAEARAKAEAES
KARAAEEAARAADLDERRRKALAEAEAIRAMMAAPKKVLVAKKPEEVKPAAAKTAAGADAKKGTLHKPAA
TAGGGARAGAPAAPGSGKEVKSAKLSSSWANDATKKKEIKTRGDSSGGVGRNNWRSGPRGRRGNDRNEQH
QPQVAAEFRAIEVHVPETITVAELAHKMAIKASEVIKALMKMGQMVTINQPLDQDTAMIVVEEMGHKAVV
AALDDPEAFTAEEVSSHQAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAPGEAGGITQHIGAYHVKTP
RGIVTFLDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTREAIKHAKAAGVPIVVAITKADKHEAN
PEKVKQELVAEEVVPEEYGGDSPFVAVSSKTGMGIDELLEQVLLQAEVLELKAPVDAMAKGLVIEAQLDK
GRGPVATVLVQSGTLKVGDVVLAGQTFGRVRAMTDENGRTTKDAGPSIPVEIQGLSEVPQAGDEFMVLSD
ERRAREIATYRAGKFRNTKLAKQQAAKLESVFSEMTAGEVQHLPIIIKADVQGSQEALAASLLKLSTDEI
KVQLVYAGVGGISESDVNLAIASKAIVIGFNVRADAGARKTAEANGVQLHYYNIIYDAVDELKAAMSGML
APEQREEVIGTAEIRTVFVATKIGTIAGSYITSGQVTRGCRFRLLRDNVVIYTGEVESVRRLKDDVKEVK
EGFECGIKLRNYTDIKEGDQLELFEIKEIARTL
>gi|319762635|ref|YP_004126572.1| ribosome-binding factor a [Alicycliphilus denitrificans BC]
MAAKKSSTPNRGFKVADQIQRDLAELIRDLKDPRIGMCTLQAVEVTPDYAHAKVFFSVLVGDGQATQEAL
NQAAGFLRNGLFKRLSIHTVPTLHFVFDRTTERASDMNALIARAVASRSKDDDVND
>gi|319762636|ref|YP_004126573.1| tRNA pseudouridine synthase b [Alicycliphilus denitrificans BC]
MTERAPRVRVQRRPVHGVLLLDKPLGFSSNDALQKVKWLLRAEKAGHTGTLDPLATGVLPLCFGAATKFS
ALQLDAPKTYEAIALLGTTTTTGDAEGEVLERRAVDPAQLTPERLAEVQRQFTGPIRQVPPMHSALKKDG
KALYEYARAGVEVERPARDVTIHALNLALTLAGQAQAAIKITVTCSKGTYIRTLGEDIGGALGCGAHLTF
LRRLDTGGLGVERCVTLAQIEALDEDARLGLLQPVQTLLAGHAVVTLGEQDAGRFLSGMRRRGPWPDAGA
VAVYGERPHALLGVGHVLQGELIPDRLLSPLEIQQILQGAPRAHIERGTLETTL
>gi|319762637|ref|YP_004126574.1| gtp-binding protein typa [Alicycliphilus denitrificans BC]
MSKQIRNIAIIAHVDHGKTTMVDQLLRQSGTFAAHEKVVDTVMDSNAIERERGITILAKNCAVSWEGTHI
NILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVVNKVDKPGARPDYV
VNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEQGAPGEQWGPDMSALFNTILKHVPSVKGDPAAPVQ
MQVSALDYSTFVGRIGVGRITQGTLKAGQDVLVMAGPDGASYKGRINQIHQFQGLDRVQVSEAGPSEIVL
INGIENVGIGETITDPANPQPLPMLKIDEPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQRELRSNVAL
RVKETDEDGIFEVSGRGELHLTILLEEMRREGYELAVSKPRVVFKDIDGVRCEPIELVTADIEEGHQGGV
MQALGERKGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPHKGEIGGRKNG
VLISMDDGEIFTYALGKLDDRGRMFVRAGDPVYEGMIVGVHNRDNDLVVNATRTKQLTNFRVSGKEDAIK
VTPPIELSLEYGVEFIEEDELVEITPKSIRLRKRHLKEHERKRASREGA
>gi|319762638|ref|YP_004126575.1| hypothetical protein Alide_1944 [Alicycliphilus denitrificans BC]
MQSRPTQKALPPTSPVPATAVAPRTLPLHAVPSTLLIPLAARAAGDACFPHLACGDAEASRQLRHLGVDV
STYLADRPTVLNVLWRTRRIRAAGRAFFARHPHAWGINLGCGLSHYFQWLDNGRNTWVDADLPEVMALRR
ALDPPLSPRLRRAILDITHPQWWQALHLPRRALAQPLFVVCEGVLMYLRPAQARQVLAQFATHAPAGSRL
WIDVLPQCAVGHARWHSSVGRTGAEFQWGIRHPDELCASHPRLRLLQLHSVAECYGWLGRGLDALWNPWI
GMPLYGLAELGV
>gi|319762639|ref|YP_004126576.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MTEMATEVVAEVRGRVGCITLNRPKALNALSLGMVRDLMATLLAWQHDDKVLAVAIRGNGREGPFGAFCA
GGDIRFLHAAGSVGNPQLEDFFTEEYALNHLIHNYGKPYIAFMDGIVMGGGMGISQGGSLRIVTERTKMA
MPETAIGLFPDVGGGYFLSRCPGRVGEWLALTGDTIGAADAIAFGLADGFLPADQQAAVWEGLGTQAFAD
GAAAQQWVASKFVAAGACQISARTQIDQYFALDGVSAIVAALERANDDWARATAATLRKRSPLMLHVVLE
QIRRARAMGLADDLRMERDMVRHCFYLRPGESETLEGIRALAVDKDQNPAWRPARIEDVSPELVQAFFKS
PWPAHAHPLAALR
>gi|319762640|ref|YP_004126577.1| transmembrane anti-sigma factor [Alicycliphilus denitrificans BC]
MNSPRPPLPPNGAELHALVDGRLPPEHAERLRASLDARTREEADDWERQRALLRTLHADWLERPVPDALR
QAADQLQDTHDGRSRWALWGGIAASWVLAFGLGWGLHGPWGGGATLAVAPSSPPLRFAQQAAVAHAVYQP
EQRHPVEVTAAQQDHLVQWLSKRLARPLTVPHLQAQGFDLVGGRLLPGGSGARAQFMYQDTAGKRITLYL
GALEDAQAEAFHFYSQGPVSGFYWVEHGFGYALSGELPRPALQALATAVYQQLQLSAAPPEGERAPARGS
>gi|319762641|ref|YP_004126578.1| RNA polymerase sigma factor, sigma-70 family [Alicycliphilus denitrificans BC]
MNRAQIVEQLPGLRRYARALTGDAWAADDLVQDTLERACRKWLLWRSGSDLRAWLFTLMHNLYLNQRRGL
LAVQALDAESLAALPGADGAASDVAIDLDRCLQRLPAEQRAVLLLVTLEDMAYADVARVLDIPVGTVMSR
LSRARSRMRELLEQAPAHAPAFPRDPSTPLRRMK
>gi|319762642|ref|YP_004126579.1| secreted repeat protein [Alicycliphilus denitrificans BC]
MTKLGSLLVALALAGGYSMSHAQVSAQDGVLVGPNGMTLYVFDKDMAGSGKSVCNGPCATNWPPLAATAA
PGGDGYSLIQRDDGTKQVAYKGKPLYYWSKDSKPGDKTGDGVNNVWHTATP
>gi|319762643|ref|YP_004126580.1| ssra-binding protein [Alicycliphilus denitrificans BC]
MAKKPETSSRIADNKKAAYNYFFEERHEAGMVLHGWEVKALREGKVQLTDGYVVIKDGELFLIGCQINPL
KTASTHVNPDATRIKKLLLHKDEIRRLIGKVEQKGYTLVPLNLHWKDGRAKCDIALAKGKAEHDKRDTIK
EREGKREVERAMKSRHR
>gi|319762644|ref|YP_004126581.1| cyclase/dehydrase [Alicycliphilus denitrificans BC]
MKTVNKSVLIWYSPEEMFALVTDVAKYPQFLPWCDHATVLERSEHGMKAEVGISLGGLHKSFVTRNTHEE
GRRVKMELVEGPFSKLDGDWHFHPVGDGSQRACKVELQLHYGFDSKALAALVGPVFDRIAATFVDAFIKR
AEQVYG
>gi|319762645|ref|YP_004126582.1| hypothetical protein Alide_1951 [Alicycliphilus denitrificans BC]
MADMLRVTVAASLQASEVREWQLRLPAGASVADAVLACNIDVQHGRLACGIWGRAVELHERLRDGDRVEC
CRPLTVDPKLARRQRFASQGARAAGLFAKRRAGSKSGY
>gi|319762646|ref|YP_004126583.1| hypothetical protein Alide_1952 [Alicycliphilus denitrificans BC]
MKPYKLVLLALACTWAIGAFAQWQWVDKDGRKVFSDRPPPQDVPEKNILKQPHTGSPSRPAAAPQATAGS
DASSPAQAAPGTGKDKQLEENKAKAEAAEAAKKKAEQERQAKVRADNCARAKLVKAQLAPGRLVSHTNAN
GERSFMDDATRAAELSRADAVIASDCQ
>gi|319762647|ref|YP_004126584.1| inosine-5'-monophosphate dehydrogenase [Alicycliphilus denitrificans BC]
MRLLGKALTFDDVLLVPAYSQVLPKDTSLFTRFTRNIQLNLPLVSAAMDTVTEARLAIAIAQEGGIGVIH
KNMTAQQQAAEVSRVKRHESGVVHDPVVITPEHTVLQVLELSENLGISGFPVCDGGKVVGIVTSRDVRFE
TRYDVKVSQIMTPREKLITVNEKDHTSPAQAKALLNKHKLERLLVVNDGFELKGLITVKDINKQTTFPNA
ARDSEGRLRVAAAVGVGEGTEERVAALVKAGVDAIVVDTAHGHSKGVIERVRWVKQNYPQVDVIGGNIAT
GAAALALVEAGADAVKVGIGPGSICTTRIVAGVGVPQIMAIDNVATALKGTGVPLIADGGIRFSGDIAKA
IAAGASTIMMGGMFAGTEEAPGEVILYQGRSYKSYRGMGSIGAMQQGSADRYFQEATTGNPNADKLVPEG
IEGRVPYKGSMVSIVFQMAGGVRAAMGYCGCATIAEMNDKAEFVEITAAGIRESHVHDVQITKEAPNYRA
D
>gi|319762648|ref|YP_004126585.1| gmp synthase, large subunit [Alicycliphilus denitrificans BC]
MQHDKILILDFGSQVTQLIARRVREAHVYCEVHPCDVSSEWVRSFAADGRLKGVILSGSHASVYEVDDKA
PEAVFELGVPVLGICYGMQTMANQLGGKVEGSHTREFGYAEVRAHGHTELLKGIEDFATPEGYGMLKVWM
SHGDKVTGLPPGFKLMASTPSCPIAGMADEARRFYAVQFHPEVTHTVQGRALLERFVLGICAARPDWVMK
DHIAEAVEAIRAQVGDEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGDMVMDMFEGKL
HAKVIRVDASELFLSKLAGVSEPEQKRKIIGGLFVDVFKAEAAKLKAAGGGHKGATFLAQGTIYPDVIES
GGAKSKKAVTIKSHHNVGGLPEQLGLKLLEPLRDLFKDEVRELGVALGLPREMVYRHPFPGPGLGVRILG
EVKKEYADLLRRADAIFIAELRACIDPASGKSWYDLTSQAFTVFLPVKSVGVMGDGRTYDYVVALRAVQT
SDFMTADWAELPYELLKKVSGRIINEVRGINRVTYDVSSKPPATIEWE
>gi|319762649|ref|YP_004126586.1| integrase family protein [Alicycliphilus denitrificans BC]
MLTDTALRNLKPKSLTYKVSDRDGMYVTVSPAGTITFRYDYRLHGRRETLTIGRYGALGISLALAREKLL
DAKKAVMAGRSPALEKQREKRRLTAAKNFGDLALKWLADAKMADSTRAMRKHVVDRDILPVFQNRLLNEI
TADDLRALCNRVKARGAPATAVHVRDIVKQIYAFAILHGEKVDNPANDVAAASIATFVPKDRALSPTEIR
LAFHQLESIATYPTIRLALRMVLLTLVRKSELIEATWSEIDFENATWTIPKQRMKGRNPHVVYLSRQALD
MHNCAGPAGLQHLPIHVVTQTKKPAGNWCLRACKRLNPLQAACAKAGAGRIRARRGAASR
>gi|319762650|ref|YP_004126587.1| citrate synthase i [Alicycliphilus denitrificans BC]
MKLADNKATLSFSNGSPSVELPVYQGSIGPDVIDIRKLYGQTGMFTYDPGFLSTASCQSAITYIDGDKGE
LLYRGYPIEQLATKCDYLDTCYLLLNGELPNAGQRDDFHKLVLKHTMVHEQMQFFLRGFRRDAHPMAVLT
GLIGALSAFYHDSTDINNPEHRHISAIRLISKLPTLVAMAYKYGVGQPFMYPRNELSYAGNFLRMMFGTP
CEDYKVNPVIERAMDRIFILHADHEQNASTSTVRLCGSSGTNPFAAIAAGVACLWGPAHGGANEACLNML
EHLQANGGVAKVGEFMEQVKDKNSGVKLMGFGHRVYKNYDPRAKLMQETCNEVLAELGLEKDPLFALAKQ
LEKIALEDDYFVQRKLYPNVDFYSGIVQRAIGIPVNLFTGIFALARTVGWIAQLNEMIGDPEYKIGRPRQ
LFTGSPRRDVP
>gi|319762651|ref|YP_004126588.1| hypothetical protein Alide_1957 [Alicycliphilus denitrificans BC]
MTDDALLDARDVAVLRWRSRRGLVENDLFIERFFERHGANLTVGQGRAVTMLMNLPDNDLLDLLLRRKEP
EGEIDTDQVRAVLEQMRQRA
>gi|319762652|ref|YP_004126589.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein [Alicycliphilus denitrificans BC]
MQRTFKIYRYDPDKDAKPYMQTLQVELDGHERMLLDALLKLKKQDPSLSFRRSCREGVCGSDAMNINGKN
GLACLTNMKTLQGDIVLKPLPGLPVIRDLIVDMTQFFNQYHSIKPYLQNDEPTSPSKERLQSPEEREELD
GLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIADSRDKATGERLDNLEDPYRLFRCHTIMNCVD
VCPKGLKPAAAISKIKELMVRRAI
>gi|319762653|ref|YP_004126590.1| succinate dehydrogenase, flavoprotein subunit [Alicycliphilus denitrificans BC]
MSYTKKDIAVRKFDVVIVGAGGSGMRASLELSRAGLSVACLSKVFPTRSHTVAAQGGVSASLGNMSEDNW
HYHFYDTIKGGDWLSDQDAVEFMCREAPNVVIELEHFGMPFDRNPDGTIYQRPFGGHTANYGEKPVQRAC
AAADRTGHAMLHTLYQKNVESKTNFFVEWMALDLIRNSAGDVVGVTALELETGDLYELHAKAVLLATGGA
GRIFAASTNAFINTGDGLGMAARAGIPLQDLEFWQFHPTGVAGAGVLLTEGCRGEGAILLNSNGERFMER
YAPTLKDLAPRDFVSRSMDQEIKEGRGCGPNKDYILMKLDHLGADTIRKRLPSVEEIGHNFANVDITKEP
IPVVPTIHYQMGGIPTNVHGQVVVWDGEKNNVVNGLYAVGECAAVSVHGANRLGTNSLLDLLVFGKSAGK
HIVEFVKGFGDHHAVPADASDRTLARLNQLEDSKDGVYAQDLANDIRQTMQSHAGVFRTQKGMDEGVEKI
AAIRERVSSIGLKDKSKVWNTARMEALEVDNLIEVAQATMVSAAARKECRGAHTVDDYEHPADHPTAPLG
RDDVNWLKHTLWHSQTNSLTYKPVNMKPLTVDSIPPKVRTF
>gi|319762654|ref|YP_004126591.1| succinate dehydrogenase, hydrophobic membrane anchor protein [Alicycliphilus denitrificans BC]
MSATYGYKRTVVGAHYGWRDFLVQRITAVLIGVFTLLVLCKLLFTSGPIGYDTWAGIFAPQWMKALTFSV
IVAVIWHAWVGVCSVWYDYAKPAGLRLVLQALSIIWLVSCGGWAVQVLWRL
>gi|319762655|ref|YP_004126592.1| succinate dehydrogenase, cytochrome b556 subunit [Alicycliphilus denitrificans BC]
MTQLAKKRPEFRNIHAFKDLPSYRWPLAALVSGMHRISGLILFLLLPFIIWLFDKSVSSEISFGSFTAAF
TTGIGFVPAWFVKLVVLALIWSYLHHLAAGVRHLVLDVTHKTTKDFGRHSAAATLVFSIMLTVILGAKLF
GLY
>gi|319762656|ref|YP_004126593.1| ubic transcription regulator-associated domain-containing protein [Alicycliphilus denitrificans BC]
MPPPPPPSTEDPPSMSGSVGSVTPAFSPLYQQIKGLILHSLQHGEWKPGEAIPSEIELAARFRVSQGTVR
KAIDELAAENLVTRRQGKGTFVSTHTERQVQYRFLKLLPDEGDASVEGPAQRTILECRRARASVEVARIL
ALRAGDPVIQIKRILSFTGVPTILEDIWLPGQAFKGLTAEQMAHYQGPTYAMFEIDFGVRMVRAEEKIRA
VLPDETQAQWLNVTCSTPLLSVERLAYTYNDAPMELRRGLYRTDTHHYYNELS
>gi|319762657|ref|YP_004126594.1| malate dehydrogenase [Alicycliphilus denitrificans BC]
MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQNALKGVIMELEDCAFPLLAG
IEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNA
YIAMKSAPDLPRENFTAMLRLDHNRAASQIAAKIGCSVGDIEKLCVWGNHSPTMYADYRFATVDGKSVKD
AINDHDWNANVFLPTVGKRGAAIIAARGLSSAASAANAAIDHMRDWALGTNGKWVTMGIPSNGEYGIPKD
VMFGYPVTTEGGKYKIVEGLPIDAFSQECINKTLAELQGEQDGVKHLL
>gi|319762658|ref|YP_004126595.1| trans-aconitate 2-methyltransferase [Alicycliphilus denitrificans BC]
MLDWNPALYLRFAAERTRPAAELLARVPLAQARHVVDLGCGPGNSTELLAQRFPEACITGIDNSQAMLAA
ARQRLPQAGFALADIATWTPNSGDAPDLIYANAALQWVGAHETLLPRLFALLAPGGVLAVQMPDNLDEPT
HRLMREVAGLPRFACHIGDAARVRTGILPVGSYYDLLAAPEAGAASVDIWHTVYQHPMDSAGAIVQWLQG
TGLKPFVEGLEPALRDGFLAEYKRRVDAAYGMRADGRRLLAFPRLFIVAQRQS
>gi|319762659|ref|YP_004126596.1| hypothetical protein Alide_1965 [Alicycliphilus denitrificans BC]
MKTLIASALLLAAPAWALAQTAPQPAGKPAAQAEAKKSASKASTKPAAAKSAAAKSNKAAGEAHRAVAKA
SPTSSRTQLHSGAMQVAAGISAAETALTPQELAIAENVYTGRMACELGAFVEVEADAQSPGRFYVHGKGF
RYHMSPVVSVTSAVRLEDQRAGAVWIQIANKSMLMNQKLGQRMADECMSPQQVTVAEAIRKNPPPSLLET
PAAK
>gi|319762660|ref|YP_004126597.1| aconitate hydratase 2 [Alicycliphilus denitrificans BC]
MLQAYRDHVAERAALGIPPLPLDAKQVAELIELIKNPPAGEAEFLLDLLTHRVPPGVDDAAKVKASFLAA
VAHGDIQVGLISKARATELLGTMVGGYNVHPLIELLDDAEVAGVAAEALKKTLLMFDYFNDVAARAKAGN
AKAQEVMQSWADAEWFTSRPEVEKKITVTVFKVPGETNTDDLSPAPDATTRPDIPLHYLAMLKNTRPDAA
FKPEQDGVRGPMQFIEDLKKKGHLVAYVGDVVGTGSSRKSATNSVIWATGQDIPYVPNKRFGGVTLGGKI
APIFFNTQEDSGALPIEVDVSKMEMGDVVDIFPYEGRIEKNGEKIADFQLKSDVLLDEVRAGGRINLIIG
RSLTAKARETLGLPASTAFRLPQAPAESKAGFTLAQKMVGRACGLPEGQGIRPGTYCEPKMTTVGSQDTT
GPMTRDELKDLACLGFSADMVMQSFCHTAAYPKPVDVKTHRELPAFISNRGGVALRPGDGVIHSWLNRLL
LPDTVGTGGDSHTRFPIGISFPAGSGLVAFGAATGVMPLDMPESVLVRFKGELQPGVTLRDLVHAIPLYA
IKAGLLTVAKAGKKNIFSGKILEIEGLPDLKVEQAFELSDASAERSAAGCTIKLNPEPIKEYLRSNIVLM
KNMIADGYQDAKTLQRRIEKVEAWLAKPELLEADKDAEYAAVIEIDMNEIKEPIVCCPNDPDDAKFLSEV
AGTKIDEAFIGSCMTNIGHFRAAAKLLGGQRDIPVKLWVAPPTKMDQNELIKEGHYAAFGTAGARTEMPG
CSLCMGNQAQVREGATVISTSTRNFPNRLGKNTNVFLGSAELAAIASRLGKLPTREEYLKEMGVIDADKA
SVYRYMNFDQIEEYAEVAKGVTA
>gi|319762661|ref|YP_004126598.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MELRLLHYFATLAEELHFGRAAQRLCISQPPLSVAIKQLEQELQAQLFERSSKGVRLTAAGEHLLGKARQ
LLALSHQAAQETRDVAQGTRGHLRLGFVGSSLYRGLPQALAQLQLSHPQVRVDMLEANSAEQILGLQQMR
LDVALVHSIQPPEGISSQLIVEEPFVVCLPDHHPLCDGESIDLAELRDDRLILFSNLVSPTYHQRIYEMC
LAHGFAPEVRHEVRHWLSVISLVSLGQGVALVPAALERVGLPRLVFRPLLGEHPRSEMLAMWRSAPANPL
VQTLLAHLQQAAQMLDI
>gi|319762662|ref|YP_004126599.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MSANDQTQMTALAQASAAAHPVPDRGHVNYYTGDGELQSLLALYLPADLHAHLQPYFERMGELAGGAVDD
WAQEADRNPPTLEMRSRAGKEQQRIVKHPAYVEMEKVAFQQFGLAAISHREDMLGWKGKMPPIVKYALTY
LFVQSEFGLCCPLSMTDSLTRTLKKYGAPELVNKYLPRLLAMDFDSSVQGSMFMTEQAAGSDIANTLTMA
YPQEDGSWRLYGEKWFCSNPDAGFSMVLARVDGGPPGMKGISLFLLPRIKDDGSTNHYHIVRLKDKMGTR
SMASGEIRMEGAVAYLVGEQGRGFVQIADMVNNSRLSNGMRSAGMMRRAVAEAEFIARERWAFGRRLQDL
PLMRVQLDKLRVPAEQARTMVFQTAATLARSDAGDKSAYALLRILTPMIKFRACRDARKVAGDAMEVRGG
CGYIEEWADPRLVRDAHLGSIWEGTSNIVALDVVRAIKREGSLPVLNDYLHGLLADTAAITPAYRQALGD
ALARAAKLAERAAAEGGEKLARQAASGLYHCTTAIAMAWEAGKTGSSERLRLSQLVLAHRVLPRDPLAEA
AVPADWRQ
>gi|319762663|ref|YP_004126600.1| hypothetical protein Alide_1969 [Alicycliphilus denitrificans BC]
MTMTKRSLLGLIAGAAMLAALPVQAQDKFPDRPIMFVVPFPPGGPTDAMARILATELTRELGQAVVVENR
AGAGGNIGADFVARANPDGYTIMFGTSGPLAINHSLYKGLKYDPRISFEPVIYVGYLPNVLVVRPGLGVN
SVQELIAKEKAKPGTLNYASSGNGASSHLAGVLFNGMAGTQLVHVPYKGTGPALNDLLAGQVDMTFTDIL
TAMPYIKSDKVKALGVATAKRSSAMPDIPTIAEQGGKELKGYDVSVFFGVVAPKGTPADRVKLLNQAFTR
ALATDKVRQTFAAQGLEASPDHSPAYLGRFIKAEVDKWAKVVQQSGVQLD
>gi|319762664|ref|YP_004126601.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MNFMTQGQDPRQAASKAGALAGIKVLDLSRILGGPLCGQILGDHGADVLKVEPPQGDDTRAWGPPFNKDG
VASYYFGLNRNKRIQFLDLSAPDGQQRVRELMARADVVVENFKAGTMEKWGIGYEQVRHEFPHLVWCRVT
GFGTDGPLGALPGYDAAIQAMAGLMSINGDAQGDPLRVGLPVVDMVTGMNAAIGVLLALHERARSGQGQL
VDAALYDSGLSLLHPHAANWFMSGKVPGRTGNAHPNIYPYDVVHTGGAPIFLAVGNDRQFALLCDYIGQG
ALAQDERFATAGQRSVNRHELKPLLTQAFADRDGQELADALMAIGVPAAPVLDVAQALRHPHTAHREMVV
AMDGGYQGLGAPVKLSRTPASYRLAPLSEGQDFLHD
>gi|319762665|ref|YP_004126602.1| glutathione-disulfide reductase [Alicycliphilus denitrificans BC]
MKHYDYIVIGGGSGGIASANRAAMHGRRCALIEAGELGGTCVNVGCVPKKVMWHAAQIADAIRQYGPDYG
FDATINRFDWDTLVRNRGAYIGRIHASYAAGLEKNKVDVIRGFARFVDARTIEVGGERLTAGHILIATGG
HPVRPDIPGAEHGLDSDGFFALPALPRRTAVVGAGYIAVELAGVLNALGSQTHLFVRKHAPLRNFDPLLS
DTLVEAMRAEGPQLHTHASPTALRKNADGSLTLELGNGERHTTDCVIWAIGRAPHTAGLRPEAAGVMLDE
RGYVRVDKYQDTNVPGIHAVGDVTGQVELTPVAVAAGRRLAERLFNGRPDAHLDYGNIPSVVFSHPPIGT
VGLTEPEAREQYGDDAVRVYQSAFTAMYSAVTRHRQSARMKLVCVGPDERIVGIHGIGHGMDEILQGFAV
ALKMGATKRDFDDTVAIHPTAAEEFVTMR
>gi|319762666|ref|YP_004126603.1| (2fe-2S)-binding domain-containing protein [Alicycliphilus denitrificans BC]
MQIQLKVNGRAITADVPPNTLLVQFLREHLRLTGTHQGCDTAQCGACTVIADGRSIKACNALAVQMQGAD
ITTIEGLAAADGTLHPMQAAFKECHGLQCGFCTPGMVMSAVDLLAHNPRASEAEIREQLEGNICRCTGYQ
NIVHAVQTAQKALAA
>gi|319762667|ref|YP_004126604.1| aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein [Alicycliphilus denitrificans BC]
MGATEFAKLPHIGESVKRKEDLRFLTGAGNYTDDIVQPGQKYAVFVRSPYAHANIKSVDTAAAAAMPGVA
AVFTGKDIEGKVNGLPCGWLISNPDGSPMKEPPHPVLASTKVRYVGDHVAMVVADTLEQAKNAAEAVAVD
YEELAPVIDMRTASQGPALHAEAPDNHCYKWTLGDKAAVDAAFAGAAHVTAIDLTNNRLIPNAMEPRAAN
ASYNRATDEYQLYVANQNPHVERLLMTAFVLGLPEHKVRVIAPDVGGGFGSKIFLYAEDVALTWAARQLN
CPIKWTAERSESFVSDAHGRDHISHAEMAMDKDGKFLAMRVHTHANLGAYLSTFASAIPTILYGTLLAGQ
YATPQIYVEVDGWFTSTAPVDAYRGAGRPEAAYLVERLVTRCAWELGLPQDEIRKRNFIASFPYQTPVAL
QYDTGDFHACMNESQKLADVAGFEARRKASEARGLRRGMGYSCYIEACGLAPSNIAGALGARAGLFEAGE
VRVHPTGSVTVFTGSHSHGQGHETTFAQLVAARLGLDPGQVDIVHGDTGRVPFGMGTYGSRSLSVGGTAI
MKALDKIEAKAKKIAAHLMEASDADIEFAGGEFTVKGTDKKVPFAQVALTAYVPHNYPLDKLEPGLNETA
FYDPTNFTYPAGTYICEVEVDPQTGVVRVDRFTAVDDFGVIVNPMIVEGQVHGGVVQGMGQALMEHGVYD
PDSGQLLTGSYMDYTMPRAADFPEFKLGHVCTPCTHNPIGSKGCGEAGAIGSPPAVINAVLDALRPLGVT
DIDMPATPHRVWQAIQSAAA
>gi|319762668|ref|YP_004126605.1| carbon-monoxide dehydrogenase (acceptor) [Alicycliphilus denitrificans BC]
MYAFTYERPTSEADALRLAQAGARPLAGGQTLLASMKLRLAAPEQIVDLGAVPELKGIRRDGDALVIGAM
TRHCDVAESAEARAAIPALAALAGGIGDKQVRARGTIGGSVANNDPAADYPAALLALGATVHTTARAIAA
DDFFQGLFATALEEGELITAVRFPIAAKAAYVKFAQPASLFALIGVFVAQTAQGVRVAVTGGGNGVFRHQ
AMEKALDARFAPEAIAGVPTEEAGMSSDLHASSAYRAHLVGVMAQRAVARALA
>gi|319762669|ref|YP_004126606.1| atpase associated with various cellular activities aaa_5 [Alicycliphilus denitrificans BC]
MNASTPPCVCNSIDELAAALQAVGYFADRRLATAVFLALKLQRPLLLEGEPGVGKTELAKALAQALGRQL
LRLQCFDGMEQREALYEWNYAAQLLHLRANEGTASASALEQEVYQPRYLVRRPLLQALEALEPGALLLID
EVDRADEPFEAFLLEYLGEYQVSIPELGTIRAAVPPVTILTSNRTRELNDAVKRRCLYHWLDYPGREREL
AIVHALVPQAGQRLAAQVAAFVQQLRSSPYADRFQRAPGIAETVEWARALVALDTLVLDPEVVADTAGIL
FKQRDDVAALDAALARDVLQAAQD
>gi|319762670|ref|YP_004126607.1| vwa containing coxe family protein [Alicycliphilus denitrificans BC]
MTISTSPATPRRASQLGDARSGKLAANLVAFGRALRRAGVPVDGARIALAQQAIEAVGVARREDMAAALE
AVLLSRAQDRAVFAELFDAFFRDPELAHKLLAQMLPRAEGHAEPPRQRPRVREALAPPKPQAQQAAGPDQ
AVDLDAAMTASAAQRLRHADFNLLSASEYRLVERLVRDIPLPLPSVASRRTRGGARGARVHWARTLRRAA
RSGGDLVSLARLRRRRQPLPLLLLVDVSGSMERYARLLLAFLHAATARTRLDGANLRVRRDVFAFGTALT
DLTPAFAQADTDAMLADAGRAIHDFAGGTRLGDSLAQLRQRHGRRLVGRRTLVLIVSDGLDTGEPGALAE
ELAWLGRRCRRMLWLNPLLRFDGYAPSARGAAQLHRACDGMLAVHNVSKLQELAGAIAALLER
>gi|319762671|ref|YP_004126608.1| carbon monoxide dehydrogenase subunit g [Alicycliphilus denitrificans BC]
MDMQGARQLAIGQQQAWDALNDPGVLKICIPGCDSIEATGEGAYALVNAIKVGPVAAKFKGAIHLADVNA
PHGYTLNFEGNGGVAGFGKGSARVTLTPQDEGCELAYTVHATVGGKIAQVGQRLIDGVARSMAESFFKRF
DEEMQRRHGPPPEEAAEAGEKPGALKKMWSRLKGGDKPAADGD
>gi|319762672|ref|YP_004126609.1| hypothetical protein Alide_1978 [Alicycliphilus denitrificans BC]
MENIDVTVLRALRDWRQAGHGAILVTVVRTWGSSPRPVGSIMALRADGAVTGSVSGGCIEDDMIARYTQP
GVADALPHAGPPQFAKYGVTADEAHRFGLPCGGTLELLIEFDPDAASLAALVDRLDAGQLVQRSVRLADG
GVALTPAQAPAELVLDAQQLVNTFGPEYRMLIIGAGQMSEYLATMALFCGFAVTVCDPREEYRSGFAVPG
ARLLATMPDDTVAAFAPDARSCVVALTHDPKLDDLALLQALETPAFYIGAIGSRRNNQARRQRMIEHLGQ
TGESLARLRGPVGIYIGSKTPPEIAVSIMAEVLAVKNGVALPPGVDVAHVKDSQGLAGPGSACLAD
>gi|319762673|ref|YP_004126610.1| molybdenum cofactor cytidylyltransferase [Alicycliphilus denitrificans BC]
MRESQQRIGAVVMAAGAGRRMGHVPKGLLRRGGEPLLLRQIRLLAEAGVDEAVVVLGHHAERLEPVLRQA
GSAPRGMALRWVANPAPDEGPGASLRCGLAALPDGLTTLLVMLADQPLLELQDVQAMLAAWRARAAGVEL
AVPQHAGQPGHPIVFGPLVRGQVLRAQGGAGVREWRRAHGDQVLLVPLSHARCTTDVDTPDDVQRLGRDF
GVWLE
>gi|319762674|ref|YP_004126611.1| hypothetical protein Alide_1980 [Alicycliphilus denitrificans BC]
MNPEDIVVLPELKAYIDPLTPDEHDALERSILEEGCRDALVLWGNVLVDGHNRYGICRKHGLPFKTVQNT
RFQNMEDVHLWMIDQHLGRRSVSEFQRGVLALRKREIIAERRAAAAAAVVAAKAEAGQSPEAQAPWEGDT
DPVVAKALASVPKVPEDALDTREALARAARLTAAQVKMIEAIHQNAAPEVVAAVKSGELSLNAAAVVATL
PVDEQKSVAAGGAQELKQAARRVRDAKKKPKAEAPAATAQEGGGPAASPDELRQRVAELEAENERLRQQV
KALQDLLAEQG
>gi|319762675|ref|YP_004126612.1| hypothetical protein Alide_1981 [Alicycliphilus denitrificans BC]
MERISNNYQDASGKPYIRTFAIVLAIFGVLIFLARAKASLNMFEFGDETEKLVAAQMIKAGMRLYHDIFA
HHGPVAYIISHAYVNLVDPTNFSHIRWFMVGLALLASLSIYTSPIFKNTTSRLIATGAFLVLLSSIWAVQ
GIHMMLYHQIGGFLFIIPITQVFLPLLYGHKPTAFGFASAGFSCAIICFTAYAFGPSVILISTSSIILII
TNRHYTEIFKQIIPVFWGALFATSIVAIWIALNADFEGYFIYHFYFNQAVYSKFIEFNLGAIKNLFFIDF
SRPAIVHTFILFGLIASLFFLAKTEKPQIFKKNNKLTAFSVVLFFLSLIMLNPRGSTGFHDAGLDVAGLA
VFSVLGSYYIDEINGKLSTKKIALIILGILCTILLFELASRKAISSPYGVRKSDFKSYSNTRNATADYGL
ITELVENDKDLLALIFRPSIYIDTGKSPTSGHYYYLPWQAAYNKNPVDGYKIDICKDLELHRPSVIWFDN
WKVWERYSIQDYEPCVMEIINSSYRAITKGSYFYIKSDRLMQDHAALNVDEGKISATRPLDESTPIALKI
FSPKNDDNGTLKRIGIKFETHTRDNPGDAQLELSASDGKVFRQNFPLSELKNNHYKYFDVPNDIGANFAS
GKILSGSGSGISTLEIQSTDGNSLTCINYIYSDNKIAVTPGCPQ
>gi|319762676|ref|YP_004126613.1| amine oxidase [Alicycliphilus denitrificans BC]
MANNFQQTEITIIGGGFTGLTAAYELVKSGIKVTVLESEPEIGGLAAAFDVGGEKLDRFYHHWFTNDLEV
MTLIGELGLQNKVEINPTNTGVYYANNFFKLSTPWDLLNFTPLAFLDRIRLGLLALRARRVKNWKNLEAK
TAHEWLKSLGGENVYRVVWQPLLKGKFGPYAEDVSAVWFWNKLKLRGGSRGKGGEERLAYFKGGFVALAE
ALAQRIRDLGGIIAVNTPVSSVTKEGGDWIVKTTDGTISSKRIIFTTALPIISEMIKSWAPSEYLDSLNR
IQYIGNVCLVLELDRPLSETYWLNVNDPSFPFVGVIEHTNFERPETYGGRHIVYLSKYLPHTDRLYSMTA
DEFLDYAIPFIQKMFPRFDRTWIQKHHLWRARWSQPVVEKYYSTLIPDEDGPAEGLHICTMAQIYPEDRG
TNYAIREGRRIGRKISRSPSVVN
>gi|319762677|ref|YP_004126614.1| hypothetical protein Alide_1983 [Alicycliphilus denitrificans BC]
MNRIFRIIIGPGLAIFFIWLALKDINTRELIESIHQTEISYIVIAIFVFFAGYSCRIERWRLMLINENTK
LNWKECAGPLMASVAANNVLPFRAGDIFRAIKFNKQLRISAATSITTLFVERLLDLLMVVLFLGIALAYF
GMDSSRLIGIGGSALLSGGAIILFLLIFPSIFKPFAHWLSKVISKAFPKFGQKLDAEFTKIFTALEHTSK
GSTMIKLICWSFAAWLSEGLVFWFIALSIPTISYDLAAWLALPVGTLATIIPSTPGYVGTFDYFTSQAMI
ALGNREESSIAFAFIVHAVLWLPPTVVGGLYFLINPMKKTK
>gi|319762678|ref|YP_004126615.1| glycosyl transferase family 2 [Alicycliphilus denitrificans BC]
MTAIPKSEKKQELISIIVPCYNEEEVISETLKRLKIFCSELTELDVELIFVDDGSRDRTRELLRNYASED
TRIKVICFARNFGHQIAVTAGIDAAVGNAVVLIDADLQDPPEVVHEMIAKWKEGYDVVYGTRTERPGESA
FKLATARGFYRLLNKLSDVPIPLDTGDFRLMSRAVVDTLRAMPERDRFVRGMVSWVGFKQVALPYKRAER
FAGESKYPLRKMLRFATDGILSFSTKPLQLSVALGMASAALSLIGIAYALFLRIFTNTWVEGWTALMIAV
LFIGGVQLVSIGILGEYVGRIYSEIKKRPLYVVQEYLGFSNEGPKMSRSPVVNITNT
>gi|319762679|ref|YP_004126616.1| peptidase u32 [Alicycliphilus denitrificans BC]
MTPKAPELLLPAGSLDKMRAAYDFGADAVYAGQPRYSLRARNNEFRLEQIAQGIQEAHARGKKFFVTSNL
IAHNDKVRTYLRDIEPVIDCKPDALIMADPGLIMMVKEKWPETEVHLSVQANTTNWATVKFWQKAGVSRI
ILSRELSLDEIEKIRQECPDMEIEVFVHGALCIAYSGRCLLSGYFNHRDPNQGTCTNACRWEYKTHDAAV
DPNTGEALATGMDKGFNFEQAREAADAQFSSTCGSGQRHPKADQVYLIEEIGRPGELMPIMEDEHGTYIM
NSKDLRAVEHVERLVKIGVDSLKIEGRTKSLYYVARTAQVYRRAIDDAVAGRPFNPHLITELEGLANRGY
TGGLLERRPANDYQNYETGNSVLQRAHFVGEVRGWADGLAEVETKNRFQVGDMLEIIHPQGNRQVRLEKM
FNLDGEPVQVAQGSPVRVCIPLDGPVEGALIARLLQI
>gi|319762680|ref|YP_004126617.1| hypothetical protein Alide_1986 [Alicycliphilus denitrificans BC]
MRHASRLGGLSLAALLGVTGCGTGPAALRGPAASAEVAPRATACPAALPTGTTCLSGRDSQGAYYLIARP
ADWNGVLVLHAHGGPLLSAPSPQRAVEDLERWAIMVRAGYAWAGSTFRQGGVAVRAAAEDTERLRGIFRS
HVGQPRRTLLHGQSWGAGVAAKAAEMFTAQTVGEQPYDGVLLTSGVLGGGTHAYDFRLDLRVVYQYLCGN
HPRPTEPQYALNLGLPAGAHMTAADVAGRVNECLALDRPAAGRSTQQRAKARTISQVIRIPESSITSHLA
WGTLHFQDISSRRTGGRSPFGNEGAVYTGSADDAALNAGVLRYRADPAAYRQFADDTDPTGRIPVPVLST
KWISDPTAFVELDARFRSVMRQGGSGRRLVQTFTTRGTHSYISDATYATLASALLRWVETGAKPTPAGIA
AACPAFEARLGAGCSFDPAYQPAPLQTRVPPRQRPE
>gi|319762681|ref|YP_004126618.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MPFDLTDLRLFVHVHEAGSITGGAARSHLALPSASERIRGMESALGAALLVRGQRGVRLTAAGHTLLHHA
RLVLRQMEHLRGDLADHGAGLAGHVHLLCNTSALGEHLPPLLPAFLAAHPRVSVELEERTSQDIADTVRA
GLADLGVVSDATDLQGLSTLPFRPDPLALAVPVGHALAAQRCVALAQLQDQDFVGLPHGSALQALVSRHL
GPRARYRARLQHLEAVCRLVGLGAGVAVVPLAAARRHARALRIRPVPLSDAWARRSLVLCLRDAHALPPF
TQQLVHHLRAEAH
>gi|319762682|ref|YP_004126619.1| hypothetical protein Alide_1988 [Alicycliphilus denitrificans BC]
MAAVVFLLAGVVKGVVGLGLPTVAMALLALRLVPAEAAALLVVPSLATNVWQTRPWGTLGPLGKRLAGLL
LGVCAGTWAGAWLLGAPAGAWARVALGMALIGYALWSLAGASPHVPRRMERWLGPLAGAFTGFVTAATGV
FVVPAVPYLQSLGLQRDAFVQAMGLSFSVSTLALAVGLAGNASLPGAMLGWSVLMLAPALLGMALGGWLR
RRLSPLWFRRCLMAGLLALGGHMVLAG
>gi|319762683|ref|YP_004126620.1| response regulator receiver [Alicycliphilus denitrificans BC]
MDAERLLLLVEDDEAFARTLARSFERRGYRVLRADSLAQVRELLGAHSPSYAVVDLKLKGEATGLACVRE
LHAHDEGMLIVVLTGYASIATAVEAVKLGACHYLAKPSNTDDIEAAFGLTEGNADVELTNRCSSIKTLEW
ERIHEVLAETGFNITEAARRLGMHRRTLARKLDKRRV
>gi|319762684|ref|YP_004126621.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MTPGTPATLKARSADAAAGLKNLQQLIQLRWIAVVGQIFTIEVAHYGLQLPLPLREMLMVVGCLALYNVT
SLLRWRTGRGVRNVELFLALLVDVAVLTVQLYLSGGTGNPFALLFLLQIALGAALLRSGYIWAMVCITAL
CLALLAHYRVPLQLSPDFSRGLASPYVLGLLVCFMLNAALVVIFISRINHNLRERDARLAAARQRAAEQQ
HVLRMGLLASGAAHELGTPLSTMAVILGDWRRDPALADNAALQQDVAEMQVQLQRCKTIVSGILLSAGEA
RAEASAQTTVRQFLDALAREWRATRAVDRFDYDNRFGQDGPMVSDVTLQQMVFNVLDNARDASPHWVGLV
AEREQDMLRIAISDDGPGFAPTMLARLGAPYQSSKGQPGGGLGLFLSLNVARTLGGSVHAENLPGGGARV
TITLPLAAIALDTGHGTF
>gi|319762685|ref|YP_004126622.1| surfeit locus 1 family protein [Alicycliphilus denitrificans BC]
MTLRAPAADQPNAPRSGRTLALLALAGVALALAFAALGAWQVERRVWKLALMQRVEQRLHAEPVPLPPRA
DWPRVDAAGHEYLPVLAQGRWLAGKTVLTQAATELGAGFWVLTALQLDAGGQVLVNRGFIPEAQRGAWAA
GTAFPLAREGAAAQVRGLLRMTEPGGGFLRSNDPARQRWHSRDVAAIARALGLEDAAPFFIDAGIPDPRA
GNASPGAGPWPRPGMTVVRFHNSHLVYAITWFGLAAMAAAATVFVTRHELRLRAAASAR
>gi|319762686|ref|YP_004126623.1| cytochrome o ubiquinol oxidase subunit iv [Alicycliphilus denitrificans BC]
MSAHELHAGHGGHHQDDHHHDDIHVTRGDYVKGFVLAVILTAIPFWLVMNGAIQDRTTGALVLGLFAAVQ
IVVHMVYFLHMNGKIQGGWTMLSTLFTIVFLAVTIAGTLWVMFHMNAAMMPSHP
>gi|319762687|ref|YP_004126624.1| cytochrome o ubiquinol oxidase, subunit iii [Alicycliphilus denitrificans BC]
MSDTHTLPASAAALAERQYHLAHEPHPENGTSLGFWLYLMSDCLIFAVLFATYGVLGRNYAGGPTGAELF
DLKLVAINTAFLLLSSITFGFAMLQKQQRDVRGTLAWLAVTGLLGLAFLAVELYEFAHLLHEGAGPQRSA
FLSSFFTLVGTHGLHVTFGTIWLVTLMIQIGKHGLIPENARRLNCLSMFWHFLDVVWIGVFTFVYLMGVL
>gi|319762688|ref|YP_004126625.1| cytochrome o ubiquinol oxidase, subunit i [Alicycliphilus denitrificans BC]
MPEHTIPPAHWLLGRITWDSIPMAHEPIVLWTFIAVVLGGLVVVAALFKFRLWGPLWRDWFCSIDHKKIG
IMYMVLGLVMFLRGFADAAMMRLQQSMAFGENMGYLPPHHYDQIFTAHGVIMIFFVAMPFVTGLMNYLVP
LQIGARDVSFPFLNNFSFWMTTGGAVLVMLSLFLGEFSTAGWLALSNLGAQDPGVGLDYYIWGLQVAGVG
TTLSGINLIVTIIKMRAPGMQLMKMPVFSWTALCTNALIVATFPILTAALVLMSLDRYAGTNFFTNDLGG
NSMLYVNLIWIWGHPEVYILVLPAFGVFSEVVATFSRKRLFGYTSMVYATVCITVLSYLVWLHHFFTMGS
GATVNTFFGITTMIISIPTGAKIFNWLFTMYKGRIRFELPMLWTVGFMVTFAIGGMTGVLLAVPPADFVL
HNSLFLIAHFHNVIIGGVVFAVFAGINYWFPKAFGYKLDEFWGRCSFWFWLVGFWVAFTPLYILGLMGAT
RRVNHFEDPSLQIWFVIAACGAALIALGIASFLIQLAVSYARREQLRDVTGDPWDARTLEWATSSPPPQY
NFAFTPVAHEIDAWWDMKKHGYQRPLAGFQPIHMPANTGAGVVIAGLSTLFGFAMIWHMWPLAIASFAAT
VLASIIHTFNYQRDYHIPAAEVAATEEARTQQLAAAHV
>gi|319762689|ref|YP_004126626.1| ubiquinol oxidase, subunit ii [Alicycliphilus denitrificans BC]
MIHMKKLRGPAWLAAAAAVAGLAGCGKTVVLNPAGDIAAQQGDLVVTATLLMLIVIVPVILLTLLFAWKY
RQGNADAKYDPDWHHSTVLELVIWTVPLMIIIALGALTWIATHKLDPYRPLDRIDAQRALAADARPLEVE
VVAMDWKWLFFYPEQGIATVNELAAPVDRPIRFKLTATSTMNAFYVPDLAGMIYAMPGMQTELNAVINKP
GVFQGLASHYSGKGFSGMTFKFHGLSDAEFAQWIDKAKAEGKPLDKAAYLQLARPSERDPVQRFSSVEPD
LYHRVLNRCVEDGQPCMHETMAKDARRGAAAAPAEPPAHAQHGAGGHHQ
>gi|319762690|ref|YP_004126627.1| general substrate transporter [Alicycliphilus denitrificans BC]
MSSASIAYPVYGHEDAASLSRAHTDEDVTPGEIAVGVVIGRASEYFDFFVFGIACVLVFPSLLFPFLSHL
DGTLAAFAIFAIAFVARPFGTAISMAVQRRWGRGTKLTLALFVLGVCTVGMAFLPGYQSAGTAAIVALAV
LRFGQGLALGGSWDGLPSLLAMAAPPERRGWYAMVGQLGAPLGFVLAASLFAYLYGSLSLAEFLAWGWRY
PFCVAFAINVVALFARLRLVVGQSYAELLEEKELEPVGVARLMQDEGGNVVLGAFAALASFALFHVVTVF
PLSWMSLYSGRSMTGVLGVQIVGALLAVAAVALSGRLADRVGRRNLLGSMAVLIGLFSLATPWLLGGGEL
GGNVFLLAGFVLLGLSYGQASGTVTANFSARYRYTGAALSTDLAWLIGAAFAPLVALGLSARFGLGAVTL
YLLSGVACTLAALRINRVIEQRS
>gi|319762691|ref|YP_004126628.1| protein tola [Alicycliphilus denitrificans BC]
MHATNDRDQFAPPRPPGRMRAIALAVLAHAILIGALTWGVNWKSSADQPAVEAELWAAVPQQAAPRAAEP
PPPPEPEPEPQPTPAPPPPPPPPPPPRQAEPDTHEADIALQKQKKREEELKKKREQQLEQEKKDKERRER
LEQEKKERQLAQQKAEHEKAERAKKLAEQKRLEQQKAEQEKQKKLAEEKRKAELEAKRAEEFRKDQMRRI
AGLAGATGGETATGTAQRSAGPSGSYAGKVAAKVKPNIVYPDLVEGNPRAEVEVRAAPDGTIVGTRILHS
SGNKAWDDAVIRALQRTETLPRDVDGRVPSSLVIGFRPKD
>gi|319762692|ref|YP_004126629.1| biopolymer transport protein exbd/tolr [Alicycliphilus denitrificans BC]
MPAMASRSGTRRRSMNEINMVPFIDVMLVLLIIFMVTAPMLTPSSVNLPSVGKGTKMPKTRADVIVDKDG
GIRFKTDGNERTVPLQNLGSTARNWLKDQPEDTPVLISADKNVSYDSVMKAMSALQAAGIPRVALAVKSG
G
>gi|319762693|ref|YP_004126630.1| protein tolq [Alicycliphilus denitrificans BC]
MNSQDMSILSLVLNASWVVQLVMLLLLAVSVASWAAIFRKLFALKRVKALNEDFERDFWSGTSLNELFAA
AAHNAKSAGPMERIFASGMREYQKLRERRITDPGTLLDGARRAMRASFQREMDVIESSLSFLGSVASVSP
YVGLFGTVWGIMHAFTGFAGMEQVTLATVAPGIAEALVATAIGLFAAIPAVIAYNRFARDIDRVAIHQET
FIEEFSNILQRNLGAHPASPSGH
>gi|319762694|ref|YP_004126631.1| tol-pal system-associated acyl-CoA thioesterase [Alicycliphilus denitrificans BC]
MFEWPVRIYWEDTDAGGIVFYANYLKFFERARTEWLRSLDLGQQRLRELTGGMFVVTDARLRYLRPARLD
DELIVTARLQECGRASLTIEQQALLKPEQMNPELPPALLCEGSIRIGWVEAATLRPARIPGPLLERLSSS
>gi|319762695|ref|YP_004126632.1| aminotransferase class i and ii [Alicycliphilus denitrificans BC]
MKFSTRAERIEPFYVMEVAKAAQGLAREVAGTREPMIFLNIGEPDFTAPPLVRQAADRAVRDGLTQYTNA
LGLDELRERISGWYAARFGVNVPARRIVVTAGASAALQLACLALIDAGDEILMPDPSYPCNRHFVSAADG
RAVLVPTTAEERFQLSAAKVEAAWGARTRGVLLASPSNPTGTSIAPDELRRIHEAVRARGGITIIDEIYL
GLSYEEAFGHTALALGEDVVSINSFSKYFNMTGWRLGWMVVPEAMVSVVERLAQNLFICASTISQHAALA
CFEAESIAEYERRRAEFKARRDFFIPALNRLGLTVPVPPDGAFYAWADCGEAARRLGVQGSWDFAFELMR
RAHLAITPGRDFGTADTARFVRFSTANSMAQLQEAVARMQALIG
>gi|319762696|ref|YP_004126633.1| transcription antitermination factor nusb [Alicycliphilus denitrificans BC]
MSEASTPGQPMPSKRPPRQPRTGLTATGARKAGSKSGRSRAREFALQALYQHLVGGNDATAIDLFTRDLS
GFHKADAAHYDALLHGCIETEQHMDALIAPLLDRKMAEISPIEHAVMWIGVYEFQHCPDVPWRVVINECI
ELAKEFGGTDGHKYVNGILNGLAPQLRTAEVAADKAAGKAG
>gi|319762697|ref|YP_004126634.1| 6,7-dimethyl-8-ribityllumazine synthase [Alicycliphilus denitrificans BC]
MFGADKGTADRLDGRKLHIGIVQARFNENITNALAAACRAELLRLGVQEQHIRHVLVPGALEVPLALQAM
AERGGYDALIALGCIIRGETYHFELVANESGAGVTRIGLDYQIPIANAILTTENLEQAIARQSEKGVDAA
RVAVEMANLQEELS
>gi|319762698|ref|YP_004126635.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase [Alicycliphilus denitrificans BC]
MNTPLTPAPISPVQDIVAELAAGRIVILVDEEDRENEGDLVIAADHVTPEAINFMARFGRGLVCLTLTRE
RCERLQLPPMVARNGTKMGTAFTVSIEAAEGVTTGISAADRARTVQAAVAPHAQASDLVQPGHIFPLQAV
DGGVLMRAGHTEAGCDLAAMAGCSPAAVICEVMKDDGTMARLPDLQLFAAEHGLKIGTIADLIEHRSRTE
SLVHKAGSRPMQTAFGEFTAHAFRDEPSQGVHLALVKGQWDAQESVPVRVHEPLSVLDTLESSRAMHSWS
LDASLRYIAAQGRGVAVLLNCGETGEQLLAQFEGRARAAQAPERGRMDLRTYGVGAQILREVGVARMQLM
GQPRRMPSMAGYGLEITGYIPKE
>gi|319762699|ref|YP_004126636.1| ferredoxin [Alicycliphilus denitrificans BC]
MSTPPFFTARVGDDGTQCDAWPDQPLLVSLEQGGIDWPSSCRNGTCRTCICLLVQGQVRYEVEWPGLSAE
EKAEGWVLPCVARPVSDVTLEAPAV
>gi|319762700|ref|YP_004126637.1| nudix hydrolase [Alicycliphilus denitrificans BC]
MQPVPHPSTPEIPRDAASVVLLRDTPAGIETLLLRRHAQMANMGGLYVFPGGKLDAADRDDAALLDQPAQ
TLHEGLGESALDPATAAGLHVAALREALEECGLLLAEPAQAQAPVDAPRARAMLREGQPLAQVLAALQLR
LSTRRMCAWSRWITPVTPAMATRRFDTRFFVAQAPDGQEAGHDDEETTASVWIAPRTALEQYRDGQIDLA
PPQIMGLAHLARHASVRSVMEQARLRRPPTVLPEAFEHEGARVICYPGDPLHSVRDRALPGPTRLYQREQ
RFFPGDGFESLFA
>gi|319762701|ref|YP_004126638.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MELDFKGRVAIVTGAGGGLGRQHALALAARGASVLVNDLGGAVDGSGGSAGAAQAVVDEIRAAGGQALAN
GASVTDFAAVQAMVQQAIDAWGRVDVLVNNAGILRDKSFAKMDMADFQLVVQVHLMGAAHCCKAVWPHMQ
AQKYGRIVMTTSSTGLYGNFGQANYGAAKLAQVGLMQTLAIEGAKYGIHVNALAPTAATRMTAGLMPDEV
LARLAPEAVVPAMLALAHESAPTRTILCAGAGSFEAAHITLTRGIHLGQGPDVPEQLAARLAEVCDRAGE
QVPQNGSDQGANELRLAMAVAA
>gi|319762702|ref|YP_004126639.1| glutamate/cysteine ligase [Alicycliphilus denitrificans BC]
MSTLQQRIAALPAERLAGMRRGIEKEGLRVLPAGGLALTPHPLALGSALTHPCITTDYSESQIELITGAH
VGVEDCLDELTQIHQYVLRTLRDAGGEMLWVSSMPCGLPTDETIPIGRYGNSHIGRAKSIYRMGLAHRYG
RRMQTISGIHYNWSLPGVTSEEYFALIRNFRRHAFVLLYLFGASPALCPCFVQGRTHGLQPMGDGREALY
LPHATSLRMGRLGYQSDAQASLNVSYNGLSGYADSLHEALTRPYPAYEAIGIRNIGGDYNQLGTSLLQIE
NEFYGTIRPKRTVRRGERPLHALRERGVEYVEVRLMDLDPFESVGITAATMRLLDVFLLHCLLTDSPPDT
PQEIAECKHNQHQTAERGREPGLLLQRRGQSVALADWAAQVLDECAPIAAALDQAQPGQDYAAALRQARA
VLADSALAPSARVLAAMQAQPGCSFEAFSFAQSAKARDRLLALPWSARQQAHYEALAARSLAEQKDIEAQ
DQLPFEEWRQQYMDPRQLG
>gi|319762703|ref|YP_004126640.1| hypothetical protein Alide_2009 [Alicycliphilus denitrificans BC]
MPIPFASRLHAARRVLLSHYVANGAAAALGLLLISALVHLWLGSGAASAATVGAIVAIPPDMPAPRRGKL
LHMLPAPLLALPLFLVVQRLHDEPWMLGLLIVPASFLAFLAMAWGKRGAPVAIAAVLALVFSMAVPAPAE
GEGWRVALATTFHFGLGALLYQPWAALSNRLLNGRYRVQLIADVLLSLADLMRLQALQFTPVLSLGERDN
PLMGALLLRQATLADQLQSARDIVLESPTSARQQRLAGMLLCALEMRDHLLASALDLEQLRRQPEQAGAL
ERLRDELLAQAGVLERLADALLLGRKPEPQARPRLDLGALEEPAHAGFTPARLVRGLAYRIGHVQDEVGQ
LVALARGEREPDLALVRVYWQMFVSSTGWGWKPFWGLWRWRAAPLRHAMRAALAIGVGYAVSQLLPWREH
AYWIVLTIIVVLRGSLAQTLERRNERVAGTLLGCLIASALLAADMPHWALLACVTLAQAVAHSFTLRRYL
FTAVAATVLGLVQAHLLGAGGSTGFVLLERMADTLIGAGLAWAFAYVLPSWERQQIPALVARTLAAQMRH
AREALALGQLQAVDNHPELAWRLARREAYDSLGALVQATARAWKEPRAVRPPLAPLERMQAHCYQLLAQL
TAVKSMLLLRRGHLRGEDVHAPLQAAAQRIEAILSGQDMPAPPEHGADDGLAAEPLPALVETDLTPWLLR
RLRLAEGLARQMRAEAGQVVAPLSEAA
>gi|319762704|ref|YP_004126641.1| hypothetical protein Alide_2010 [Alicycliphilus denitrificans BC]
MPATPPHKQNAEMLFKGVVCALIGAVILLAPYIARSPSVQELMRQAALVGWFSLVLGVAFIVRALWQRWR
>gi|319762705|ref|YP_004126642.1| endoribonuclease l-psp [Alicycliphilus denitrificans BC]
MEIKRIATDNRRSRAVVYNDMVFVGGQTADDRSQDIRGQTAQTLAKIEKFLAEAGTDKSRLLTAQIWIKD
LERDFAGMNEVWDAWTAPNAAPTRATAQCEMGAQDILVEIVVTAAVDQPMA
>gi|319762706|ref|YP_004126643.1| bfd domain protein (2fe-2S)-binding domain protein [Alicycliphilus denitrificans BC]
MATGVEVFDLVVIGAGPAGLSAAIEARRFGLSAVVLDEQRRVGGQIYRAIEESSPRRREVLGADYAAGAK
LAQDFASCGAVHVGGAAVWNVDRDKTVSYLLDGGSRKVRGRSLVLASGAMERPFPVPGWTLPGVMGAGAA
QILYKSSGAVPTEPVVLAGGGPLLFLLAQQYLEAGVKIKALIHTTRADDYLRAAPHVLGALRGWKDLSKG
TRMLKKIRSHGVQTFAGASSFAIEGSEKAESIAFTHNGQRKRVETSLVLLHQGVVPNTQLSWSLRAEHRW
DERQLCWIPITDAHGQIEETGIYIAGDSRGIVGAKASACQGRLAALSIANRLQPIAPGAFKQREQAILDE
IRAHVQIRPFLDALYRPQNEHRIPEHDEVMVCRCEEVKAGQIRKYVEVGCLGPNQTKAFGRCGMGPCQGR
LCGLTVTEIIASERKVCPQDVGYYRIRPPIKPITLGELASSE
>gi|319762707|ref|YP_004126644.1| hypothetical protein Alide_2013 [Alicycliphilus denitrificans BC]
MHTKTQESRISLFMPEENAGGRKIRIYFDDQQLTVPEGVSVASALLMSGVRTFRATPVSGSPRAPYCMMG
VCFECLVEIDGRPSRQSCLTQVQEGMVIKRQDGASGLNIPSAEG
>gi|319762708|ref|YP_004126645.1| fad dependent oxidoreductase [Alicycliphilus denitrificans BC]
MSSNGIIVVGGGLVGAAIAYGAAKSGSAVTLLDQGDVAYRASRGNFGLVWLQSKGAGFPRYARWSRDAVD
HWGPLASELRELTGVDVDLQQNGGFWIGFSEKEVAEREAMLAKINAADGRTPFEMLDHRELKARLPAIGP
KVAGGSWCSLDGHANPLKLLHALHAGIQALGGRICNGADVAEVCPLGEGQGFRARSSDGRQWIGEKIVLA
AGLSNSVLAPQLGLHAPVVPNRGQVLITERLKKFLPHPTNKARQTAEGTVQLGFSVEDVGLDDGTTVAAI
EWIAKRAVATFPILSSVKLVRAWGALRVMTPDGSPIYQESARYPGAFTATSHSGVSLAGSHAYEIGPWIT
GVKSAPEGIEEFAGERFLDPDRKFSNAH
>gi|319762709|ref|YP_004126646.1| hypothetical protein Alide_2015 [Alicycliphilus denitrificans BC]
MSSRIARRPFLASAIFTLLFSLGSAAQAEWPEKPIRFIVNAAAGGAADGTARVLADGLSKRLGQPIIIDN
KPGASGVIGLDTVAKAAPDGYTIGNSNLATYIVTALTAKSLPYDPAKSFTPIAKQWTQPNLLGVSPTIPV
KSVADLVNYAKTHPGEIFYGSTGNGTALHVLGALFANLTGAQITHVPYKSAPAAELDLAAGQIQMMFSNF
TSMEPQVKAGRINALAITGPNRSPMLPNVPTIREAGYPDLEMETWGGVVGPANMPPAIVEKLHREINAVL
SDPEVIKKHEKLGAKVAPVSIADYRQMLNADSARWGEVVRRNNITLN
>gi|319762710|ref|YP_004126647.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MTSRNVTYRMIEAFRAAMLHNGISAGADSLGITQPAMSRLIADLQKSTGILLFAKSGRTIKPTEEAHALM
AKVQQSFLGLEQIIDFSDQLRKQKLGQLSISAIPSIGHSIIPAVVRQLREKFPDVLISLRVASYIDVARH
VKTRQADIGLTADTLSLGDLETVAEFSSECVCIGTGKWLDPKASHIHVSEFAGKPFIASTGTFQTRLDAW
LGANGVQVDAMVEASLFQSISDLCLEGLGIAVVDPMTAAKHQRRGGVALPLRPSIGYTVYATAMSDARLS
APAKELIRLVAAASSGKHITPMHESMI
>gi|319762711|ref|YP_004126648.1| ribosome biogenesis gtp-binding protein ylqf [Alicycliphilus denitrificans BC]
MSIQWFPGHMHLTRKAIGERIKDIDVVIELLDARLPGSSGNPLLAELTGHKPTLKVLNKQDVADPARTPA
WLDWYNARPGTRAIALDASDAAPARRLVEACRQLAPNRRGLSRPMRVLICGIPNVGKSTLINTLSAKREA
KTGDEAGVTKQEQRIVLDDDFYLWDTPGMLWPRIIVPESGYRLAASGAVGRNAYDEEEVALELLAYVKRH
YASLLDARYKLGLDAQAIGASHDDELLALIAKKRGAVMSGGRLNLQKAAEIVLTDLRSAALGRVTLEIPE
EFESWLAAARLKEKERAERKAEQRKRDERRARNAPRDDG
>gi|319762712|ref|YP_004126649.1| hypothetical protein Alide_2018 [Alicycliphilus denitrificans BC]
MPATPPIDSAEPGTDALCEDGLPEDATLCPGEAMDATALRQLLKAALPDSSRHKAAGWFGQTDFLFTRSH
VDEDQDTYHNGLFITIWKRWDFWLALPHDDPAAHASLFTQAWALLRQPAAPTVTDGLVRQYRGYGATGGP
GPWQGLHDAPPEALQACAEAWRGVIGYWRRAEAQRRAGRPLRARLHAALTPERVRALTLLPVFTGRYNDW
WNPERNGWWEGDVWIGARQPGQQSGRSWGRALKLSWRNGSEAPGDAEDDAHACYQIDLVDDDAPHEGTSH
PPGLRLSYAQRQSDARQSLPNDAVDHMARLLRLFTTLEQRLYAEHACAQQAPPPDDQPAPPLPRTPPFAP
DEPDAEVFGAQIMALSNDWQRAGRAHAALVRERWALQAERMAEPPAQDDGGAAAMPAIVDPRGAQAGAVL
QLARAVHAWADADLSARFHRRFAFAPGALAYRAAHVGRAVGPVLWQADGRLLAHVSAAHGAQAGAWWEVG
ADGLHIAPAPQAAPAAHGNEAQDAVTAAAHGLTVRGDADGDLHGLAEDGRTLWRHHIGGAIRSIAMAPDG
HALAVGTAGGYLVLLRKGSGIDPYLPGTSRYAEVRRFIFWDDAPAPLAW
>gi|319762713|ref|YP_004126650.1| pseudouridine synthase [Alicycliphilus denitrificans BC]
MAHAAPQPGCARHGPEHHPVHAGARLLTPDATPPLHLLWQDEHMVALYKPAGWLVHRTGLDAGETRFVVQ
ALRDQIGRHVYPVHRLDKGTCGVLVMGLHPAAARALAGSFARHAVHKRYLALVRGWAPPLADVDHPLRPD
DAPQDAPAQPAHTLLTRLARLELPESSDPRFATTRASLVLAEPTTGRRHQIRRHLKHAAHPILGDATHGK
GPLNRWWAERLGLQRLWLHAWRLRLPHPQDGRMVTIDSGLPWPPAAAPLPCAPDAPWRDWQARVLALPWM
AA
>gi|319762714|ref|YP_004126651.1| hypothetical protein Alide_2020 [Alicycliphilus denitrificans BC]
MGLDQIAIALLGATAAWLSQTRSALLRRWACIFGLLGQPFWFYASWKAGQWGIFALSIVYLGAWLHGLKV
YWLTPRRNRDAPDTGLSTIQFTPGRDS
>gi|319762715|ref|YP_004126652.1| phosphoesterase dhha1 [Alicycliphilus denitrificans BC]
MMMSPRSAILPLPLLAAPRADDPRPLVLYHGRCADGFAAALAAWRFYGGQVQCLGLSHGQAATVDDLPPL
EGRAVYVLDFSFAPALLAEIDARAARLVLLDHHKSAAEQLAGFACRCGAVHFDMAKSGARLAWEFFHPDA
PLPDLVRHVEDRDLWTWQYPETAGFVAALDMEPFDFARWSAIADFSPAETAAFVARGQAMDEKFRHLAQD
VAGGARPLAFNGEAGLMVNAPGAFHSLVGELLSRQSGTYALMWAVGGDGQVKVGLRSQRGYDCSPLAVSM
GGGGHAQACGFRMPAERLAELLSGSFDS
>gi|319762716|ref|YP_004126653.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MTDSPADSNVYRHAGFIAFLTARLVAVFATQVQAVVVAWQVYDLTRAPMALAYVGLAQFLPMLVLLLPAG
DLIDRFSRKPILAASWAAGTVCSALLWWLAGHGAAGVDGIYAVLVLFGCSRAFSAPALSSLLPQIVPRGQ
LAQAVAANGMIMRMATIGGPFLGGVLYAVGGARLAYAVCMACFALGTLLLARVAVDHAAPIGPALGSMFQ
RFGAGIRFIRSRPIILGTISLDLFAVLLGGVVALLPIYAQEVLHVGPQGLGALRSAMAIGEVGAGLYLSM
RPFDHRVGRTMFAAVAVFGLANLVFSLSTVFALSFAALMVAGAADMVSVYIRGALVQFSTPDEMRGRVNA
VNMLFIGSSNELGEFRAGTSAAWVGAVPAAVLGGLCTLGVVGLWARLFPTLRRVDKFEEAA
>gi|319762717|ref|YP_004126654.1| nuclease (snase domain-containing protein) [Alicycliphilus denitrificans BC]
MPAAASALLCLVIAIGDGDSLTVRCGEHRPMRVRVAAIDAPERRQAFGQRARQNLALLCFRQQARLHTLG
HDAYGRTLAHVRCSGQDVAAAQVRAGLAWVYRAGNRDLEQLERHARESRAGLWSQKRPMAPWDYRRRHQR
D
>gi|319762718|ref|YP_004126655.1| rard protein, dmt superfamily transporter [Alicycliphilus denitrificans BC]
MFKGLAASVAASVLFGALYYLAPLLAPLDGEQIFGWRVLCTLPFTTVLLLAQGQWPRVRLLALRAWRQPL
LALGLAGSAAMLGVQLWLFLWAPLHGRALPVSLGYFLLPLVMVLAGRVLYRERLSRLQWLATLLAAAGVA
HEVLRAGGMSWETWLVALGYTVYFVARRRMRTDHLGGHWLDMLLLVPAALWFVLRAPSSLPLVADNAHLW
ALVPVLGVVSAVALALYMAASRLLPLGLFGLLSYVEPVLLALVALLLGESIGAAQWPTYGPIFAAVAVLV
VDGALRLRQRG
>gi|319762719|ref|YP_004126656.1| pseudouridine synthase [Alicycliphilus denitrificans BC]
MKARARLIRFNKPYGVLSQFTPEGRWRGLKDFIDLPGVYVAGRLDADSEGLLLLTDSGPLQARISDPRHK
MEKTYWVQVEGIPDDAALAALQRGITLNDGPTRPARVHRLEPPPALCPRDPPIRVRRNIPDSWIELVIRE
GRNRQVRRMTAAVGHPTLRLVRAAIGPYTLDGLAPGAWDDIETIAAGA
>gi|319762720|ref|YP_004126657.1| peptidase m23 [Alicycliphilus denitrificans BC]
MLRGLGLALLPGPAVLARAATAPDAWPQALQVPGGVARLQLGPAPERPVVHAGDVPVLVLGDSIAWMALV
GIPLSAPVGQAHVTVQAAAGAPGRRIAYRVAPKQYREQRLTVAPRTVDLAPEDLARHERERAHQQQVMAT
FSTPLPDELQMRQPVPGPRSSSFGLRRVFNGQARNPHSGMDIAAATGTPIVAPLPGRVIDVGDYFFNGGT
VWLDHGGGLLTMYCHLSRVDCQVGDRLRTGDAFCKVGATGRVTGPHLHWGVMLNRTMVDPALFLPA
>gi|319762721|ref|YP_004126658.1| fumarate lyase [Alicycliphilus denitrificans BC]
MRQEHDFIGIKTIPPDAYWGVHTARAVENFPITGHTVAQMPALIRAFAFVKKAAAHANLQLGAISTTQAD
AIAKACDDLIAGQLHEQFVTDVIQGGAGTSTNMNANEVIANRALEHLGLPKGSYDVIHPNDHVNASQSTN
DTYPTAVKIATYFGIQELLGALAALRGAFEAKALEFAGILKIGRTQLQDAVPMTLGQEFAAFASMIADDE
RRLRESAYLMAEVNMGGTAIGTGINAPLGYVDAVVPKLAELSGVPVRAAANLIAATSDTGAFVDISGVLK
RIAAKLSKISNDLRLLSSGPQAGVADIRLPARQAGSSIMPGKVNPVIPEAMNQVCFEVIGNDAAITMACE
AGQLQLNAFEPLVAWALHKSLHHLARACRTLQVNCVEGIAANQGLLDERIAASVTLVTALNPVIGYEKAA
AIAKAAIATGKPIAEVAEDLGIMGRAEMQKLLVAERLTQAGAIKAVH
>gi|319762722|ref|YP_004126659.1| hypothetical protein Alide_2028 [Alicycliphilus denitrificans BC]
MNDKQALKTLAALALAALVGACASAPPQTPAPMPSTTAQNGAPSLASHDWNLTAAFDAQGRSDGSWLLAG
HTPMQLHFEGQRLSVRNLCNMLGASFGTQGGDMQLGRPVSTMRACADKDLMRLEQRVGAQLPTVTRYQLN
AGGTPQLQLFFADGSRWELAGQPTPQTQYGGPGERMFLEVAPERVACSHGVMKNAQCLRVREIRYGDNGA
KTHVGQWQVFYDEVQGYTHEPGMRNVLRINRFKRQNPPADASAYVYMLDMVVESERMK
>gi|319762723|ref|YP_004126660.1| hypothetical protein Alide_2029 [Alicycliphilus denitrificans BC]
MTPESILHFWFEELSAPQHFAKDAALDAAIARRFGATLQAAASGELSGWRQSARGRLAEIVVLDQFSRNV
YRDTPRAFAQDGMALVLAQELVASGQAGALPPAQRAFAYMPYMHSESRVVQAQSVRLFAEPGLEGNLPFA
LQHRAIIERFGRYPHRNAILGRESSGEELAFLREPGSSF
>gi|319762724|ref|YP_004126661.1| glutaminyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MSTPVHNDSTDTVKPSNFLRQIIEADLAQGTHARNRWAGSPGDAAHQGAGPADPAKIRTRFPPEPNGYLH
VGHAKSICLNFGLARDYGGVCHLRFDDTNPEKEDQEYVDGIIDAVHWLGFDWKDPDGHENLYYASNYFGF
MYRAAEYLIEAGHAYVDEQTPEEMRANRGDFGRPGVDSPYRSRTPAENLARFRDMKDGKLPDGAAVLRAK
IDMASPNINLRDPAIYRIKHAEHHNTGNAWCIYPMYTFAHPVEDALECITHSICTLEFEDQRPFYDWLLD
RLAEGGLIATPQPRQYEFARLNLTYVVTSKRKLKHLVDNGIVSGWDDPRMPTIVGLRRRGYTPESIQMFC
ERIGVTKDYSWIDYATLEGCLREDLEAKAHRAMVALDPLRLELTNWAEVFGSADHLEHCSLPALPHSHDG
AHEGAPERRFTLGREVWIEREDFEEVPPKGYKRLFPGNRVRLKGGYVIECTGCEKDAEGRVAKVLATVVP
DTKSGTPGADSVKVKAAITWVGVQDGLQAEVRLYDRLFTDAQPDAGGKDFLALLNPDSLKVVNAYVEPSL
AAARPDGKFQFERFGYFVADRKDHAPGRPVFNRITGLKDSWGK
>gi|319762725|ref|YP_004126662.1| hypothetical protein Alide_2031 [Alicycliphilus denitrificans BC]
MTQRRSWFAVAASAGVALALMAGAGAAQARSDVYWSVGVGAPGVALGVGNAAPVYYAPPPPVYYAPPPVV
YAPPRPVYYAPPPPVVYVPPVGYYQRGWGGHHHHHHGRRDWR
>gi|319762726|ref|YP_004126663.1| 3-dehydroquinate dehydratase, type ii [Alicycliphilus denitrificans BC]
MTTKTVYVLNGPNLNLLGTREPQVYGSQTLADVEQICAAACTRHGLALVFRQSNHEGALVDWIHEAGRLH
AEGKLAGVVLNAAAYTHTSVALLDAVKGTGVPLVELHISNVHARESFRHRSYLAGAARAVMCGFGVQGYA
LAIAGVAQW
>gi|319762727|ref|YP_004126664.1| alpha/beta hydrolase fold protein [Alicycliphilus denitrificans BC]
MVTARALATLPVPAQVLALERQARRETTPCGAGDMVWHAWGTPRDGVPPLVLLHGGSGSWTHWVRNIADL
MDAGRELWIPDLPGFGDSASPASGGDADALAGPMAEGLRTLFGPRQCDLVGFSFGGLTAGLLLAAHPEVA
RQLVVVGAPAMGVVPQRQVALKAWRHLPEAAQIAAHRYNLAALMLKDEALIDALDGLALGLHVANVVRDR
MPRRRLAHTDALARALSRVDCPVHAIYGRSDALYKEWIGALEGAYAAAAPDFRGLALIDDAGHWVQFERP
QAFMQALLAALRAGAGK
>gi|319762728|ref|YP_004126665.1| class i peptide chain release factor [Alicycliphilus denitrificans BC]
MTERHCPPALRVDPAEVELTAMRAQGAGGQNVNKVSSAVHLRFDIVASSLPGDVKQRLLALRDSRITQQG
VLVIKAQQYRTQEANRLDALARLQALVDSVARPPRVRRATRPTLGSQQRRLEAKSRRAGIKALRGRTAAP
D
>gi|319762729|ref|YP_004126666.1| extradiol ring-cleavage dioxygenase class iii protein subunit b [Alicycliphilus denitrificans BC]
MTTDTVSPSTGPGALPALFVSHGAPLFALEPGSTGPALARWAAGLRRSHPGLRGVVIMSPHWMERGATVM
TGARPATWHDFGGFPPALYALQYPAAGDPALAGQVLDLLRQAGIAAQGDAERPFDHGAWVPLMHLFPQAD
LPVVQVALPVGAGPAEVHAMGAALHGLRAQGVLVVGSGSMTHNLREFFGGGHERAPYVLEFSRWIEAAVE
RGDLPALLDYRRQAPHAQRAHPTEDHFLPLFFALGVAGEGWGAEYLSREVMYGMLAMDAFALHAPAAA
>gi|319762730|ref|YP_004126667.1| phospholipase/carboxylesterase [Alicycliphilus denitrificans BC]
MIAPLHRDTPAMLDLPFTCLHRPANSAVRHPWLLVLMHGVGSNEHDLFGLTPQIPEHFHVLSLRAPFRMG
PGAFAWFDFSIEPGGERTIDEAQEAHSRALLEQAVPSAARQLGVEPGRTVVGGFSQGGIMALSLLLTRPG
LMHAGLVWHGRLLAQAVPYIASADAFHGKHLRVSHGTHDNVIPLAHAQAIRRQVQALPLHLSYEEFAGAH
EIRQAELAHTVAWLQGLSGAA
>gi|319762731|ref|YP_004126668.1| hypothetical protein Alide_2037 [Alicycliphilus denitrificans BC]
MPERDPAEYRPRPESSTSWAVAAVVAAAVAAGAAWWFWWRLAQAPAPVVAPPPEAAASAPMAEASGPQHP
IAAQADAGPLPPLAESDAWVAKALGELLGAERVGRFLLTDGFVRRAVATVDNLPRAQAPARLWPVQPAPQ
RFLVEGPPGAQAIAPANAARYQAFVAFAEAVPPDAAVALYARLYPLFQAAYEELGYPGKYFNDRLVAVLD
HLLAAPAPQGPLAVQLTQVRGEVPSTRPWVRYEFADPQLEALSSGQKMLVRMGPDNARRLKAVLAELRRR
VVTGEVARRPAE
>gi|319762732|ref|YP_004126669.1| transcription regulator asnc-type-like protein [Alicycliphilus denitrificans BC]
MKLDALDLRILAELQADGSLSNVELARRVHLSPSPCLARVKALEAAGVIQRYVALANPAALGLGLNVFIS
ISLKSQSKEALAAFEQRIAEHDPVMECYLMTGDSDYLIRVALPDIAALERFILEQLTPIPGIEKIRTSFT
LKQVRYKTALPLPAAR
>gi|319762733|ref|YP_004126670.1| 2-oxo-acid dehydrogenase e1 subunit, homodimeric type [Alicycliphilus denitrificans BC]
MNAPHPPFALRDDADPQETAEWRDAFLALVAAEGPGRARFVLDELARLARAQRVGWRPDLNTPYVNTVAA
QDQPAFPGDLAIEERLASIMRWNALAMVVRANQAYGELGGHIASYASAADLFETGFNHFFHAREGLGAGQ
HRGDLVFFQPHSAPGVYARAFLEGRLSEQDLMHYRQEITAPQARARGLSSYPHPWLMPDFWQFPTGSMGI
GPISSIYHARFMRYLTHRNLLDCTGRKVWGVFGDGEMDEPESMSALTLAAREGLDNLVWVVNCNLQRLDG
PVRGNGRIVDELERLFAGAGWNVVKLLWGSDWDGLFARDLTGTLARTLGTTVDGQMQTFAAKDGRFNRDH
FFGQNPELAALAQGLTDEQIDRLKRGGHDLVKIHAAYAAAAAHRGQPTVILAHTKKGYGMGQAGQGKMTT
HSQKKLDDADLIEFRNRFNLPLTDEQATGLAFYKPLDDSPEMQYLRSHRRRLGGWLPRRETACDALPVPP
LEQYAQFALAADGKEMSTTMAFVRMLGALLKDATLGPRIVPIVADEARTFGMANLFKQVGIYSSVGQRYA
PEDIGSVLSYREALDGQILEEGISEAGAIASWTAAATSYSVHGLAMLPFYIYYSMFGFQRVGDAIWAAAD
QRARGFLLGATSGRTTLGGEGLQHQDGSSHLVAATIPNCKAYDPAHAGELSVILDAGMREMMVEQKDVFY
YVTLMNENYAQPDLPAAAHEGVLRGCYVLDSCQRLLDKPESPISCEKHVTLLSSGAILTEAARAAALLAA
EGIAATVVSVTSWSELARDGMACEQGGGTPWIARVLAGTRGPIVAATDYVRAVPESVRAYLPEGRRYRTL
GTDGFGRSDTRAALRGFFGVDAARIAQAAREALAS
>gi|319762734|ref|YP_004126671.1| amidase [Alicycliphilus denitrificans BC]
MESPNRLSVLQALRAMAEGSLTSEALTQACLERIEERNGQVLAFTAVDAGWALAQARAADRGGGGAPLRG
IPFAVKDVLDTRHLATAYGSPIYAGHRPVADAACVARVREFGGLVLGKAATSEFATQTPSRTRNPLNLEH
TPGGSSSGSAAAVADFMAPVAFGTQTTASTVRPASYCGIVGYKPTFGFLNTAGLKPLSPSQDTITLLART
VQDAALCAFGLHGMRVQAGPLERPRLAVCLSSQWDAVRPEMAEAIERIAAAAQRAGATVRRMRLPAALEP
LIGMQGRLFAFEARQSLAYERQNHAAQFSPRLQARLAGGEGIDAAQYLAMRQRALAGRQVLADLFGDVDA
ILYPPAQGEADEGIADSGSAQFGALWSLMHVPCVCVPIARGPRGLPMGVQAIGAYGDDLRTLQAAAFIHH
VAQQAELA
>gi|319762735|ref|YP_004126672.1| hypothetical protein Alide_2041 [Alicycliphilus denitrificans BC]
MQRRFNLSSHHSPVRATKSRFFAPRGWWFSQLPSADGNIGAAYAAAAAPDGYTLMMGAASTNAINPSLHK
NLKFNAIKDFAPITNVASMPNVLVVGPQVTARSVRDFIQAAKTEKYSFASSGAGGSMHLSGELFKSMAQI
PDFLHIPYKGGSAPVTDVMGGRVSAMFCNLPLCLQHIRAGKLQALGVTSSRRTPLLPEVPTIAESGVPGY
EVEGWFGLFAPTGVPRPIIQRLNHEVVRILQDPKVKESLLAQGAEPIGDSPEAFAAFVKKEHDRWARTIR
EAGIAPQ
>gi|319762736|ref|YP_004126673.1| mor transcription activator domain protein [Alicycliphilus denitrificans BC]
MKNELSRALLKRHELFAELLDVVARQLVELGICADQAQLVAAFIVDFLGAYWAGQSITFPKDEHYQLTLK
ELEAWDMYTGNNLDQVARRFKMTPRGMRKLLDRIRERIKAWREAGAAPGQLDLLGDLQPDFEDS
>gi|319762737|ref|YP_004126674.1| hypothetical protein Alide_2043 [Alicycliphilus denitrificans BC]
MTTTTSKPSADAGRARYIKLIHVARRDLERAGRLDEPGYRDILRAASNGRHDSTATMSYTQLKAAFERFQ
RAGFQSRSAAGQRRQAVSPDASKVRALWLFLHALGAVKDPSEKALAAYVKRIAKVDDLHWASGRAIDTLI
ETLKKWAMRSLPAAVAALRQEVIAAHRATPMTADQAELAQRAHMYLLRGQGFDMHWWAWECLMLALDRPI
LAHLSALRTKEAHGEE
>gi|319762738|ref|YP_004126675.1| histone family protein DNA-binding protein [Alicycliphilus denitrificans BC]
MNKSDLIERMASDADISKAAAERALESFTTAVQTTLKKGGTVALVGFGSWSVTKRAARVGRNPKTGEALK
IKARKAPKFTPGKAFKDALN
>gi|319762739|ref|YP_004126676.1| hypothetical protein Alide_2045 [Alicycliphilus denitrificans BC]
MTNTYIQILGSAFGVLGALLLAMPAMPGWGFGAFVVSNVAWLIASAWQRQWPLHLQQWVFLFCSLLGLWN
WWLEPLLTG
>gi|319762740|ref|YP_004126677.1| hypothetical protein Alide_2046 [Alicycliphilus denitrificans BC]
MSKPAMLQINARGSWRNVCEFDVADADATDRIMEAAATLAAYSTDKPSVRVVKDEAGYAVPLMRWTQDGG
WRRA
>gi|319762741|ref|YP_004126678.1| hypothetical protein Alide_2047 [Alicycliphilus denitrificans BC]
MSTSTTYRVAAVWFGDAEVTLQVDLDVLTPELAAEINGFWSGDDDRLRAEDGNVLLAVIRMFGQVAIRYL
MADGGASFGPSDDPYWTEQIIRDQGEGWPDWQELGILVTAAEVSAVGYDDVTLEAVAV
>gi|319762742|ref|YP_004126679.1| hypothetical protein Alide_2048 [Alicycliphilus denitrificans BC]
MSRVINAFQSVRPRAAVAAPVYQPLPRGRGSDIQLSGSVPRVLNVNGRPMATLAPRIYGGGPVLSRAQSQ
AQNDKTRAIVKGGI
>gi|319762743|ref|YP_004126680.1| hypothetical protein Alide_2049 [Alicycliphilus denitrificans BC]
MRAATPIDRAKASMGYQNANQWRCTKGGFGVAAQAVCNEHQPYREGGAACPA
>gi|319762744|ref|YP_004126681.1| hypothetical protein Alide_2050 [Alicycliphilus denitrificans BC]
MATLQEIQQRATALSECRDLLSALFLTLQGNLDTVKNGSMAEIKRVARKVAKEHNELVALINANPELFQK
PRTYVVEGIKFGLQASQGSLEWADDDKVCERIAALAEAGDIPADQVDLLVTVSKKPVASAIRQLSPDLRR
RIGVRLEGDGDQPLIKSVDSNIEKAVTSVINAAIKEAQAEGV
>gi|319762745|ref|YP_004126682.1| hypothetical protein Alide_2051 [Alicycliphilus denitrificans BC]
MSQTNAESQALTPAQFQEQALLLAKEIVDKVLRQQQPLRTTVVMEALIALYCYHARSLPPEAMGDVAMAL
AGVAGEFLKASSTPQSAPAGAPIH
>gi|319762746|ref|YP_004126683.1| hypothetical protein Alide_2052 [Alicycliphilus denitrificans BC]
MAVWVNSCPACGAEESLDVMFQRVIDDDVARRAIHDVVIKSLPLGVLLIRYVGLHKPPKQRLRMSRLREL
LVELVGDMQRNVIERHGRTWAVTNDDWRGAFEAVFAAVEKGSLQLPLQGNGYLYQVLSRKADQVEAAQEA
QRESERRTAGRAHSSAAPTSVGELLAAAPAAAPTAAPRPAAPTPAPGMSPTVRAMRAQLERSKGQQ
>gi|319762747|ref|YP_004126684.1| hypothetical protein Alide_2053 [Alicycliphilus denitrificans BC]
MDRHFYVLVLYILAWLAVSIAYVMLALTMALARAGYDARLDRVHAAGMELGQQMCLGLRPEAERRPAPRP
AGRAPGGLL
>gi|319762748|ref|YP_004126685.1| hypothetical protein Alide_2054 [Alicycliphilus denitrificans BC]
MRRYLLIICMDDGSKGQMRGMFRNDWEAIDTILGSGLEHVAAVVARREAP
>gi|319762749|ref|YP_004126686.1| hypothetical protein Alide_2055 [Alicycliphilus denitrificans BC]
MNPCGPLAACVLCEVPAMLNLREDLATVNSSQSALARHIGVSPAAVTQIIKYDIWPATRGLSEKLLKERI
SAYLTAKGLPAERLARTFDEAPAAPRANAELQAMAKANNSGPRPGDTQGEDPFMLLRHHSLSSAARQHFK
VLRDPFVNELNEDADVFITEDIRYVRAAMRHTAKHGGMLAVVAESGGGKSTLRQDLIDWINTMGEPITVI
EPYVIGMEDSERKGKALKATDITGAVIRAVSPGTPLHQVLQDRAAQMHNILKGSAQVGRRHVLIIEEAHA
LAVPTLKHLKRFYELQDGFKKLLSIILVGQTELEKKLSEHNPEVREVVQRCEMVKLSPLDNHVEGYLRHK
FERVGLKLEAVFAPDAVEAIRSTLRQSVTETVRGQRQAREQSLCYPLAINNLVTRAMNEAVKIGAPQVNA
ALIQAAVRGN
>gi|319762750|ref|YP_004126687.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MQLHEVSTDMAALSPEACDYVRQLARRLHEAEHGTGTDLVREAGQFLGLSVATVYRHLKAVAGWSSGRKA
RSDKGTTSVSAEALVTMGAAQRENISAGGKQRLFTTTARGILEQNGHTFGVSNGHINKLLRDRKLNVAAQ
RVAEPVQAQRAPHPNHTHQIDPSLCAIYYLKGRQYIIREDEFYKNKLDKIAQLKFKVYRYVCYDRASGML
IPWYCEAAGETQHNLFQFLMFAWGQQEGRLMHGVPKVLLWDKGSANQATAVRSLLDALGVRHIAHRAGNA
RAKGGVENGNNIVEVQFESRLKFQPVQSVEELNAAAFAWANAYCANLIPGQDTRLRRIGLPAPTARLDLW
QLITAEQVRVLPTLEVCQAFMRSKAEDRQVRGDQSVTFRHPSAGRTLPYSLKGFDGINVGDTVQVRGLIY
GECAIQVQVERYNGEPLLYRVEPSVNFDAYGQDMAAAVTGDEYRSAPHTEAQHAAKAMDEAAYPGMTGDE
IKAARDKRATPFGGKMNAHGYLQDIEHPAYLQRQGSAIDTPAHAAPVGPEMLAPEMAMLRIAPAIGRNLT
PEEYAFFMRRYADGVPEDQVAALIAQYQAPAVADEPLRAAGGLRAV
>gi|319762751|ref|YP_004126688.1| hypothetical protein Alide_2057 [Alicycliphilus denitrificans BC]
MARPQLSDEQIEERFLKKGRKALPPAEPVGPDFVGATPPDMAAQEAGAREVLKAAENYREERDLLNQLLG
QAQMANAFAKFSKTVFTSKLAFVKENKLYQSLKGSRGENGVQFSGTWEEFCNALGWTPQHANDAIASLNA
FGEEALESMSRMGIGYRDLRQYRKLPGDAQLALIEAAKAGDKGEFLDLAEEIIARHSKEKEALQAESQQA
KQDADFAGEQLQKERQRADAAEKKLAGKRPVVVPLDERITPFQMEIAERQSLIENGIAAHHEAAIALEKW
WTEEVTQAEGYDPEAPAPLPRSVALVALTLQDSINRLAELVGAAQHAFEERFGDDLAEARQYLMQTPEAA
DAAA
>gi|319762752|ref|YP_004126689.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MSNPQHHQPARRALRLLWVLQGHAFDGLRLKQVAEALQVSPPMALRDLELLAAEGVAERIPGNEECWRLT
PKLIQLARAHDDELRRVRQRVEDIDQRYTRAI
>gi|319762753|ref|YP_004126690.1| hypothetical protein Alide_2059 [Alicycliphilus denitrificans BC]
MDHFDTPAPPAHTVKAPTAAERFAEAELALSYDLAKRVPAMERGFTISTSYGDIVIPPGHHANGIAAAVR
RALEIQLKATALARRDAELDGGHP
>gi|319762754|ref|YP_004126691.1| hypothetical protein Alide_2060 [Alicycliphilus denitrificans BC]
MTRRNWKHARANSLVHALRLCKEFARDRHNLSVERIADRMGVTDDNLYKWLGTGRMPAILIPTYELACGC
HFVSDWLSASAGRLVVPMPTGRGATEADLLAVNSSCAAALDLLTKFYADPASADLAATADALRVHLEHVA
FHHHNVARYAAPELEF
>gi|319762755|ref|YP_004126692.1| hypothetical protein Alide_2061 [Alicycliphilus denitrificans BC]
MDTNPTQPESWSIHEAIAVSFNAFGERFGEDVLWLAFAELARERDATLDELGGAERDINQYLMQVLNKKG
SELDLWISSARADGAQALTLLQIGVRWWLARDDLLSRPAQSRVPCQHAEGETDHVSLQLLKQMLYRGAAP
YTTCN
>gi|319762756|ref|YP_004126693.1| hypothetical protein Alide_2062 [Alicycliphilus denitrificans BC]
MSDMSSEHLTGRALVDRVKQLQASYRAECSAALALAPGREGDVFTLMLVDDSLKPRTAAMDALRVELGLP
DPIAPSSLELGRLSCRLYKAPPHGTASASAVGG
>gi|319762757|ref|YP_004126694.1| hypothetical protein Alide_2063 [Alicycliphilus denitrificans BC]
MHPHHIVTDIAPLGYAIGLETKTRQQVRQEFASHGWSVSAWAKQKGYSATLVLDILNDDERNPRRKCLRG
ESHNIAVELGLKAGQVSRSPAPRLQLAAA
>gi|319762758|ref|YP_004126695.1| hypothetical protein Alide_2064 [Alicycliphilus denitrificans BC]
MKTAAQPSANQIKHRLRQQGQTLKTFAAANGFKYRTVSDVVRGMRHGNFGEGREVRIALGLPVND
>gi|319762759|ref|YP_004126696.1| ci repressor [Alicycliphilus denitrificans BC]
MNFFSDSLARLKHYLRVSKDQEVAAALGLSKTAFSERKKRNSFPEKELRALAEQRPELGIDVGYVLTGQS
TEDAVNKAIASALHPGREGLADVGSLGPTPAVDELSLFDRAMHAPRKRRQLIPGRLCCEADEEEQLLMAY
RDADDQGKSALLLTAHALAALAQEGKTG
>gi|319762760|ref|YP_004126697.1| hypothetical protein Alide_2066 [Alicycliphilus denitrificans BC]
MGWLVLAVLSGLAVWVGYKLAKPDLAAPEGGDAAPGPAQYHQSRPNRSALQITVDGVEHDYTHHPLFQAI
APMMARGEWGDARRYLQKIAYGIKEATEDEQRVFKHIMMAFASVDPLYAQCLRGIAPILAEHPEGIRQTT
LYPHMAAAPDAETARYVLYFADELGAIRRLKKGNSYLVFSTGSGPDLDFKVHA
>gi|319762761|ref|YP_004126698.1| hypothetical protein Alide_2067 [Alicycliphilus denitrificans BC]
MTDKSPPDDMLAYILRELVEVKVEMVSLRAVVDAQGQMINALFVALPVSQRPAALALLHAQQMSLESEGE
ESAAAMLGAFVKGLQGLLGEGLERSMGEVAAAYGLTNALVRSVPAEQAKAMRTWLSIATEGEIAQDAAQL
PPEQLSELLRLQASSKPARRGGAKKKKSDGG
>gi|319762762|ref|YP_004126699.1| phage-related membrane protein [Alicycliphilus denitrificans BC]
MRDIIPAWLRAPRTTTWLLLAALLLAVIAIVAPPQLPVVLYKVSLIALAAVLGYWLDRALFPYARPDGYL
ARDWRYGTEEPEGDVDYPVVLGYIRVFTAAMIRRALVVGCVVLGMAAGL
>gi|319762763|ref|YP_004126700.1| lytic transglycosylase catalytic [Alicycliphilus denitrificans BC]
MFPQFAALILRRVAIAFLCCTLGLWAFVLIAAWSVAYAQVPQQAQQHRALLVRTAHAAWGLDAPVAVFAA
QVHQESGWRPDAVSHVGAQGLAQFMPATTRWIAGLHPELAAQQPFSPAWALRALVTYDRWLFDRAPARYT
PRDRMHVALRAYNGGLGHWQQEAAATGAARPTAAEVDAACGKARRAAVHCRENLHYPRRILIELQPRYAA
WGPGL
>gi|319762764|ref|YP_004126701.1| hypothetical protein Alide_2070 [Alicycliphilus denitrificans BC]
MNWPAIFTPLLAPNFIVTVLVIACATALLALRLIDQALWWTAVAGAGAIYTMRGVESDRVQIKNASGQQP
>gi|319762765|ref|YP_004126702.1| hypothetical protein Alide_2071 [Alicycliphilus denitrificans BC]
MILDKIKAYGLQALCIVLLALLCAQTWRLHAEQLAHGRLQTQVSQADTGRATAALRDERRNAGLSLAHAQ
QTQENSDAFTTSQPIRDALARVDRAVAERLHLGAERRAATYRAMAETNAAACRDLADRHAALDAHVVRGV
EVVAGLRGDLVRRDAEVVLLRRQIDTDRALLDDASHE
>gi|319762766|ref|YP_004126703.1| phage/conjugal plasmid c-4 type zinc finger protein, trar family [Alicycliphilus denitrificans BC]
MSDDIDRAQAREAELLADALRDHHRRAGLAGKTAADSAEFCGESSDSGLGCGEPIPRARREASPGCQFCV
ACQSRIEKTNKGAKA
>gi|319762767|ref|YP_004126704.1| hypothetical protein Alide_2073 [Alicycliphilus denitrificans BC]
MSFTDMTFSFEAVRWLLLSAIGIYAWFIGRQSASAAELLELRTRLTTLEAQMAQVPSQAQLHELVATVAS
LRGSIETVAARIEPVARSVDRVETFLLNKK
>gi|319762768|ref|YP_004126705.1| hypothetical protein Alide_2074 [Alicycliphilus denitrificans BC]
MSNFSTFLAEDRRLVILRVLAELPAYRTNSFLLHTLLAKWGHEPSTDQVKGDLAWLREQQLVTVDDVEGV
YIATLTTRGADVAAGRAMVPGVKRPGA
>gi|319762769|ref|YP_004126706.1| hypothetical protein Alide_2075 [Alicycliphilus denitrificans BC]
MGRKSSVKRLDPVARQYLERLIREDRHTLDELLTAMRAKFPTEEVSRSAIHRHRVGYEELVKGMREQQAI
ASLVVSELGENPDDKAGALLVQTITTLTNQVALTAAGGGDVDVETVRKLARASKDVLAARRVDRQERIAI
RQEAREELLAEQQAQAQELTRAGVPAQEILAQLMKAGYGL
>gi|319762770|ref|YP_004126707.1| formate/nitrate transporter [Alicycliphilus denitrificans BC]
MKTLDAAFALLRLAAIAIGYVVILMWLAGELGWADFRLIFILPEMSA
>gi|319762771|ref|YP_004126708.1| prophage mumc02, terminase, atpase subunit, putative [Alicycliphilus denitrificans BC]
MSAVQPALPLYPYQRRWVLDDARFKIAMFARQCGKTFTSTLELALDCARAEALGQRRRWVILSRGERQAR
EAMNEGVKLHLAALSAGFKAYDYDWEPGIKALEVELPGGSKITALPANPDTARGFSANVLLDEFAFHQDS
RAIWKALFPVISKPGLKLRVISTPNGKGNKFYDLMTGADDGWSRHTTDIYQAVADGLPRNIEELRKGAGD
DDLWAQEFELKWLDEASAWLPFELITACEHEAAGKPEHYQGGPCFVGVDIASRNDLFVIWVFELVGDVLW
VREIIERRRITFAEQDMLLDGVFRRYRVIRACMDQTGMGEKPVEDAQRRHGSSRVQGVLFTSSAKLELAT
RGKEGFEDRKLRIPEGRNDLRADLHKLKKVTGATGVPRFVADSDSNGHADRTWACFLAQHAAAGGQTPIE
FTAAPSLPRGFDNLGAADDEAEDHLALIEPRSTW
>gi|319762772|ref|YP_004126709.1| hypothetical protein Alide_2078 [Alicycliphilus denitrificans BC]
MATSRILGPDGQPIQMPDLQEPQTSRLLHLQRELQTHPTRGLTPSRLAKILDAAETGDLIAQFELFEDME
EKDGHIAAEMGKRRRACVLDWDVVPPEGADAAEKKTAAQLGELLMEIPDFEDMVFDLTDAIGKGYACLEI
EWHQVEGYWVPKTITHRPQSWFTLHRGYRQELRLRSNAVVDGVMGDPLRPFGWITHIHKAKSGYLERAAL
FRQLVWTYLFKNYSVGDLAEFLELIGVLRLGKYPPNASDKEKAALLRALAAIGHNASGIIPEGMLIEFHN
VEPGDPKAFQAMIDWCERNQSKVILGGTLTSGADGKASTNALGNVHNEVRKDLRDGDIRQANTTLTRDLV
FAVASLNGLAPGGLRRLPQFRLKTQEREDLTAFSQGLPPLVNMGVRPPVSWVHERLGIPTAQGNEPVLMP
VQQATPVALPSALAATTAQLPAPAAPAIAPPHVQMQPRLADNMASAVGGWFDLVRDLVMRAQSLAEIRDG
LDALLPGMTLDQYAAAMAVALRAAEMAGRYEVMQEAAGG
>gi|319762773|ref|YP_004126710.1| head morphogenesis protein spp1 gp7 [Alicycliphilus denitrificans BC]
MPFAAYGSLPFAEQAEFFRRKLNLPTDGWTDIWTWMHDYAFVVAGANRDAIVSDFRAAVEKAIAGGATLE
DFRRDFDRIVATHGWDYNGGRNWRSRVIYDTNLSTSYAAGRWQQLQEAPYWQYEHQDWVQHPRPEHESWD
GLVLERDDPWWQTHFPPNGWGCQCKVRGLWSRDLQKLGKSGPDQAPAVKLLEREIGQRSINGPRTVRVPE
GIDPGFEYAPGRARLRSAIPPERPSPLIPGSAGGPGMPNRRPSAPLPPPRPVPATDLLPLGLEPQQYVDA
YLGALGVRPGASAVIKDVIGERLVVGQELFTDAKGALKVTKRGREQYMLLLARALREPDEVWARVEWLHA
QGRAVVRRRYVARFAVEGEPAPALAVFELGADGWSGVTTFQGVTQSEDEWRVGVLLYQRIVP
>gi|319762774|ref|YP_004126711.1| phage virion morphogenesis protein [Alicycliphilus denitrificans BC]
MAGTRLTIDKAELERLNAFMAEQAARDTSGLMPRLGEYLLRSTQARFKTQTAPDGTPWAPLQQRYARRKK
YNKDKILTLRGYLRSYIHYQIPNAQTVEVGSNQKYAAAHQLGNSFVINAHSRVQRYRSVAGRVLFAGAEH
KRGVTEKRVTTGAYMVNIPARPFLGISAADDKEIRKIITDWVIGRDK
>gi|319762775|ref|YP_004126712.1| mu-like prophage i protein [Alicycliphilus denitrificans BC]
MPSPNTPRSRSAVAIAACTFAVQAAGAADGLMRRVQYFPAGPFRSGDTRPDDVPAWRIDAASAAQVIERF
NARMARKPIVVDYEHQTLHKEKNGQPAPAAGWPKSLEWVEGEGLFGMVEMTARAAAAIDGKEYLYFSPVF
AYSKVDGTVLEILMGALTNDPGIERMQPLSLMAAATAAFLTSLDYPQEHPVNPLLKALLAALGLPETTSE
EAATAALTAIGPLQALQARAGVATAACTALQLPTDATPEVVTAACTSLRTAQADPARFVPVEAVTALQGQ
IAALTARQQAADVDALVKPALADGRLLPAMESWARELGKSNVAALTAYLAAAQPIAALAGTQTQGLPPSG
PAKGDAQLSADELAVCTAMGLTPEQYKAGAVATSAAA
>gi|319762776|ref|YP_004126713.1| hypothetical protein Alide_2082 [Alicycliphilus denitrificans BC]
MAALTQDRNTLRRDGVLIEPPVAGGARIFAGALVAINAAGLAVPGATSTTLAGAGAALAPADNTLGAAGA
LRVRVDKRPARFANSAAADAITLADIGKDCFIVDDQTVAKTSGANTRSRAGKVFDVDADGVWVDFR
>gi|319762777|ref|YP_004126714.1| mu-like prophage major head subunit gpt [Alicycliphilus denitrificans BC]
MQINHSNLAILNQAFSGAFRGALAQATPMWSQAATLVPSTTSETKYAWLGQITRFREWIGERQIQNLVLH
DYAIKNKTFENTVAVSREEIEDDQYGIYTPVIQQLGQDAALHPDELVFSLLNAGFATPCYDGQYFFDTDH
PVGAPGGQASVSNFQGGSGTAWFLLDTSKVIKPVLYQKRRDYAFTAKTSLTDENVFNRNEFVWGADGRGN
AGLGLWQLAYASKEALTVQSYADARAAHQSLRGDNGKPLVIQSKELWVPPNLEQAALEVVQAERLAGGAT
NVMRNLSKVVVCPWLAA
>gi|319762778|ref|YP_004126715.1| hypothetical protein Alide_2084 [Alicycliphilus denitrificans BC]
MATAKKTPPKRNASAQATAAATLGAPAEGMRQVLQVITKRDGFRRAGRAWSGTTTVPLDELTEEQYLQLT
TEPMLVTLLLEVPDDQVGELSAADEGGTST
>gi|319762779|ref|YP_004126716.1| hypothetical protein Alide_2085 [Alicycliphilus denitrificans BC]
MSYITTAELAERPGAREIAQTASLPHQMVRDDALMDATLRGLDRSAWTPEQIAAADAALARVQDAVAEAG
ALIDGHLVQRGYVLPIDLPAGSSGRSMVTVWARSITRYLLNKDRMSDESKDPVARDYRDALKLLGQLAAG
KFSLGVDDPAATANASSTDVRFQGAETVFGRDQMRAFR
>gi|319762780|ref|YP_004126717.1| hypothetical protein Alide_2086 [Alicycliphilus denitrificans BC]
MDLQPILQRLRDELADLQLREIEEAPGLDAAMRASRATPAIYVLPLSERGQGLDHTGDTDQIEHRLFGVL
QAVDVMSPTGTPGVVDLATLRRSVKQALIGFVADDSMGEPVLFVGGELVQFEGNGRLWWSDEFGFSGYYD
RSNP
>gi|319762781|ref|YP_004126718.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MSTRNAKNTTPQAQEDTSAQEATAAVADLAAAVVQPQAPAAPADVYSGQGGLYTMKNGKRVRVAATAATT
EEQQ
>gi|319762782|ref|YP_004126719.1| hypothetical protein Alide_2088 [Alicycliphilus denitrificans BC]
MSAPKFIKKMAVLVAIEAIVGTIVVPVAADAIEVSDVTLTPIEGDEVDQGVIRPYFGASETTLVTLYRKI
AFSVGFAGVAAAGDLPGWSTLMRACAASVTNTAAPDPDAGTVFAPVTDGIESVTIYAVVDKQLYKMAGAR
ANVKATVDAKQIPKWQYEFTGSFLPVEDVANMPAVSYAKFLRPLGVNALNTKLSLDGFTAACSSFAFDFG
NSVVKQDLMNVDTTEITGRVSTGSVTFRNTSVATKNWIEMARESAKVPLLLIHGKAVSNPANTSNTVQIS
ASLAQIGKPTFSDQDGIQMITVPLRFIPSDAGNDEWAIAA
>gi|319762783|ref|YP_004126720.1| hypothetical protein Alide_2089 [Alicycliphilus denitrificans BC]
MTVVLASVAFWAPVTYRLIGDDGKPEIVQGRARYQRLKTSERRALDRRLRANHLTPDVRAGIRAQLDAPD
SKFTARERREIEADLAAEPINDEQFLQALLVDWDFKDKTGAVISYTPAMCAQLCEEWDGFEAALARGYMD
AQKSLNDPKEQEKNSEAPSGTGS
>gi|319762784|ref|YP_004126721.1| hypothetical protein Alide_2090 [Alicycliphilus denitrificans BC]
MLGVDPDRARDAAQEADDGAADPEPDEFELPPELWPAWECFLASWNQWRVIVGFAAMYYDGIDRTALMST
MDMLGVQKSKRRDVFLQVQILEAEAKPLRNQRD
>gi|319762785|ref|YP_004126722.1| prophage tail length tape measure [Alicycliphilus denitrificans BC]
MSAQFVVGTKVTADASQYTSELTRAGQTTATYTQQVQAADTAAQAMGSAIAAGNKAHAAGAISAAQHAAA
MRMLPAQITDVVTSLSSGMPVWMVAIQQGGQIKDSFGGAGNAMRAMLGAITPTIAGLGLLAGAAGLATAA
YYQGSREADGYRQAIVMTGNAADTTVNQLTDMARAMSAISGTQGAAAESLTALAGTGAIASENLQQFATV
AMDLERRVGQPIKTTAQHLEELGKAPVQASLKLNEQYHYLTEAVYSQIKALQDQGKQEEAASLAQRTYAN
AMAERTAELRSNLGTLERLWEGLGNTARRAWDAMLNVGRAATLSDVRAKIEETNSQLNDLLMGNGFDSTG
GGAATGAGGRGRAAQIERLKKQLSDLYGQAAPLEAEEAQAQIRAEKQATDAIELAARQRIDTLKKNVRPQ
AEIRKQEIDQLDRDRETLKLSTEEYNALLAGINEKYKDKKTAGAGGIKVSDSELANLQGQLEAARLYGQQ
LATLGAGASELNAGERESLKIGEELARVTDAKTAARLREKQAIAEALGVQLRSNDGLEKSLKAHQSLIDT
TFKDADAITQRATAQEAANSVFGKGRTAIEQMTLAELEHQMAEAQASDSFDPKYIAGLELKIAAQKRYVA
ALQGADYKAAEQHVNELLRGARELAKAYEDEQQLSGLTALEREKIVAQRQVELKYAKELAAIDKSAYTDA
EKQALREQTLEAQRIESAAAVAKAQQQYMARASDEINRSLTDALMRGFESGKSAAENLADTTVNLFKSMV
LRPTISAIMTPVSLVINGIVQQGLNAVGLGSGGGGLLNMASNASSLYSLATGNSMVGNAVSTVGGWLGLG
ASTTGLGLTAGAGAGAIGAGIGSSLGLGAAGSAAGTGLGLTAGGGLGLTAGSAGASAIGAGIGTGAAAGG
AGISSALAAIPGWGWAAAAVLAIAKFAGAFEGPTPHSGGAGSYSAAGGASTGRDVLGQGLTFGVGERYYS
GEAEKAAVGISQGIVQMLDSTAEAFGNKAGYYVATAFADDSSKDGAWGSLIVRRDGEKVLDWADTQTSKW
APKVFADGEEGQKQYAAAIANSARDALKTALGDSAWAKDMLDALGDGVTLEGLGSAVAQITAAKAALDSF
GQYMPTFSSLAGGAVSALVQAAGGMDPLKASMATFVDQFYSESEKLAVNTGNVRQAIADLGFEMPGTREE
FKVLVQAQLALGEAGAETAAGLLGLSGAFASVTRDSATLADSLSITADSISSLLSNAVNGAGSEAEAQQA
ASAAFEQQLIDGMLNAMSASVGQLVMDSLVAPLMSNLVAGATASATTLALGGSVAATDLATGGAVAAAAN
ASGGSAAAGAMAAGGSAAGQAMAAGGSVAGATVANVVAQAQASINAMVTILKDPGIQAAFGEISSAIGSV
SGSLYNASGSVGGFASSIGKVSGAINGGGGGGSGGGADKGINDLADSLKNLGNTAAEEVKRLRGLMVEDS
PQSQEVLLARFATSTAAARAGDQEALKLLPELSRAIESAAAASAISSVEVARMRGWLAGSLSQTLGTLGL
DVPQFAVGTNYVPRDMLALIHEGEAIVPKAFNPMAFGAGAGADSNELRGLRVSFDRFADVSLESALNGQR
LLLRVVRALEHWEVNGMPAARKENWSPA
>gi|319762786|ref|YP_004126723.1| carbohydrate-binding family v/xii protein [Alicycliphilus denitrificans BC]
MSQQGLLIMKPFAVTDATLVSSTVPEDDAPPWSSTATYANGAMVMLASTHSVYENSLDGNINKSPDAHPD
IWTRVRATNRWRCLDRKNSARTAQADGMAFVFAPGTAIGMLAFVGLVNAASVRGRMIDPVYGTVWDQTQY
PGPAPVQSDPWEWAFGEWTNGKTLALFTGLPSFPNAQLHVELIGGPDLALGHLIYGQPRVWGQGVAWGVR
LGRAVYSKIEPNKYGELELLKRPTAKKPSFEVLLRRHELDPLMDFLDTIDAQVCLFVIADLWECMTLVGV
VQNADALPRGLSDIVLDMELLEVV
>gi|319762787|ref|YP_004126724.1| hypothetical protein Alide_2093 [Alicycliphilus denitrificans BC]
MENFITQLNGAITWVASQLATIAGHAVTTTSASADAVAAAGAAAASAGATKWQPGTAYADGAVVWSPVTY
QTYRRMGAGSGTVDPSADTAAWAPQDREAVGALISISANTTALRFCTYELGNAALALQLPVVAARGDWVG
VIPPGTVVDGQTVARNGHLLLGAAEDMDIDVTAPFRLVYVSPARGWVIAT
>gi|319762788|ref|YP_004126725.1| hypothetical protein Alide_2094 [Alicycliphilus denitrificans BC]
MSRASDVLGANAPVWVSGKTYKPGDVVKAPADRYQLYVRTGAAGGGATDPSADSANYTPFGARAIKSTQR
GVIAFGPGVKTVTATITAVNTAKTQLRILGGTSSSGGTGISSATMRVVLTDATTLTGDREAGIDSNGNTS
GSVAWELTEYF
>gi|319762789|ref|YP_004126726.1| hypothetical protein Alide_2095 [Alicycliphilus denitrificans BC]
MPFYIQLNEDGLAISVTETSADLEPSPQRVQIDGLRSDLLGQIYDPQASAAAGHAVFAPPPLPPAQRRVS
VLALRRRFAPPERVAIEWAAVDRADQPTAQRQQAAALRASLADQAAASFIDLDDADTIAGVQALETMGLL
APGRATQILAAQVAPEERP
>gi|319762790|ref|YP_004126727.1| hypothetical protein Alide_2096 [Alicycliphilus denitrificans BC]
MTRGASGTYLFTAGATFSLLARIPDAFAASHFAGYTPSAQLRTPSGKLIATLAVAWTDGAASALRLTAGD
TQDWPVGPAAFDICLESPAGTRIYTQPATIQIQRGITRAAP
>gi|319762791|ref|YP_004126728.1| hypothetical protein Alide_2097 [Alicycliphilus denitrificans BC]
MTSNCMPVNADEPVIHLRLTTDPEVFADFGTLIPGPGGGADGALLIANKLAELSSDPQTQLDAQAHLGLG
VADPLAYYILAKS
>gi|319762792|ref|YP_004126729.1| hypothetical protein Alide_2098 [Alicycliphilus denitrificans BC]
MSLESRIIALAQAIGTDIKAIKVAQGTLSALNTTNKSSLVAAINELMTLISGSGATIDDNAGNGNTAATW
SADKIYDSIEAAKMAVKSDLINGAGAALDTLNELAAALGNDPSFAATIAGELANRVRYDAAQALTSPQQA
QARSNIGAAAASDATALATGLGSYDRDYAADYAAAKA
>gi|319762793|ref|YP_004126730.1| hypothetical protein Alide_2099 [Alicycliphilus denitrificans BC]
MTLETRITALAQAIGADIKALQAGGGGGATAWADITGKPQLLGPDGWFYMVAPGKWSALDSVGGPDFDTL
SGTLDVPNPSSAGLRLSLPRWNVVSGTAANTALEQAASPSRAWRGNAVGRGGFVYRTRFSVTSTTAKQRG
FFGLQDYAANYGGAQNPYLLSNSLGIAFDSNVDANYQITHNASGAATKVDAGSSFPLGDPSAVLDLTLSC
APNASTVAWKLLTGR
>gi|319762794|ref|YP_004126731.1| transposase is4 family protein [Alicycliphilus denitrificans BC]
MRGSQDFQGAMFSYISLEERVPQAHPLRKLRAVVDALLATMNREFEAVYARRGRPSVPPEMLLKALLLQI
LFSIRSERQLVEAINYNLLYRWFVGLNIEDKVWDHSTFSANRERLFNEDLARAFFERVKLSAQWGKLASD
EHFSVDGTLIDAWASHKSFKRKDDDSGTPPGRNPEVDFKGQERCNDTHESTTDADARLFKKSQGDKSRLC
HMGHILMENRNGLIVDVEITHASGTAEREAALAMLERRGNRNKRATVGADKGYDSKAFIKGCRKLKVTPH
VAAKDKHSAVDARVTRHEGYKTSLKVRKRIEEAFGWIKTVGGLAKTKLIGQAKLTGQALLCFATYNLVRM
GSIGGWWDAHHA
>gi|319762795|ref|YP_004126732.1| hypothetical protein Alide_2103 [Alicycliphilus denitrificans BC]
MYYDPKAQEITMNAQDSDGAPLPVLRESPPAYDPLKYTLDAGGVEYGEHGWSLSYVLRQLPAETVRHNLM
VAVSQKRWAVETGGLTLPGGATVGTGIDDQNRITSVIATAQLAGVASVDFKARDSWVTLTLDQVRGIATS
IALHVQACFSAERAHHEALAAAADEDLWPYDINVGWPA
>gi|319762796|ref|YP_004126733.1| hypothetical protein Alide_2104 [Alicycliphilus denitrificans BC]
MPLPHSTHRRALLASAILALAATVHAQAPAPADYPVKPVTMVVPFAAGSVTDLLARIVAQRLGDALGQPV
VVDNRAGAD
>gi|319762797|ref|YP_004126734.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MLLSRNLLAFIAVAEELHFGRAAQRLHISQPPLSQQIRQFEEEVGAPLLVRTTRSVQLTPAGRLMLERAH
LLLAEAGAALHSVRRHAVGDEGVLTLGFTHSTVYRVLPKVLHAFRQACPNVVLELRQLTSDLLVQEVRSG
RLDVAMLRFSSSMESADLMSRVITHDPMVLVLPLGHPLAAHRRVPVRLLQGLPWVGYEIEGARYFHELEE
KVLAGARVRPSVQHRSLLPTLLALVEAGMGAALAPASAAQGGAGRIEWRELSLPEGCAPLDAVLSCVWAA
DNCNPVVQRFLDCLSDAVLQDEGAG
>gi|319762798|ref|YP_004126735.1| gntr domain protein [Alicycliphilus denitrificans BC]
MTLQFQPVASGARLADQVADALEAEIRGGRLAPGARLPTEAVLATQFAVSRTVVREAVSRLKSLGMVDSR
QGSGVYVRAAGAEPLRFEAAHLASRDAVVQMAELRRPLESEVAALAAERRTPQDLARIRAAIGALDEAVA
AGQGGAEQDLAFHLAVAEAAHNPFLIGTLQYLHGLLQGAIRVTRANEARRDDFAREVAREHERIAQAIEA
GDPVAAREAAKTHMDNAIRRIGQADPAFWRQEGARLAQPLVEGRATRQR
>gi|319762799|ref|YP_004126736.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MSSSVSAVLPAAGAEGALEKRAYGKVFWRLVPFLMLCYVVAYLDRVNVGFAKLQMAQDLGFSETVFGLGA
GIFFLGYFLFEVPSNLLLHRVGARMWIARIMITWGILSGCFMFVESPTGFYVLRFLLGVAEAGFYPGVIL
YLTYWYPAHRRARIIAVFMSAIPVAGIFGNPLSGWIMDAFHGASSLQGWQWMFLIEAVPAVLVGIMVLQY
LDNGIQKARWLTAEEKALLEREIEADHAQGGAQGPHSVAGVFRDMRVWWMALIYFAFVMGQYALTFWMPT
LVKATGVQGNFHIGLLSAIPFLCAIVAMNLFGRSADTRRERRWHLIVPSLMGAVGFTVAASYTQNTVVAL
AFLSLAAAGVLTCAPLFWSLPTAFLSGTAAAAGIAAINSVGNLAGFVSPYLIGYLKDLTGSTQIGMYVLS
AVLVLGAIGVWLVPRKLVNR
>gi|319762800|ref|YP_004126737.1| 3-hydroxyisobutyrate dehydrogenase [Alicycliphilus denitrificans BC]
MSASQPTVGLVGLGAMGLGMAQSLRRAGHAPHVFDLRREVAQDFARDGGTACETLAELGARCDVVVSVVV
NAAQTESVLFGDDGVAATMRPGSLFVMCSTVDPNWSVALESRLAKQGILYLDAPISGGAAKAASGQITMM
TAGTPEAYTRAGGVLDAMAAKVYRLGDKAGAGSKVKIINQLLAGVHIAAAAEAMALGLREGVDPAALYEV
ITHSAGNSWMFENRMAHVLAGDYTPLSAVDIFVKDLGLVLDVARASKFPLPLSSTAHQMFMQASTAGFAR
EDDSAVIKIFPGITLP
>gi|319762801|ref|YP_004126738.1| nad-dependent epimerase/dehydratase [Alicycliphilus denitrificans BC]
MNILITGGSGFLGARLARTLLAQGSLALAGAPAQPIERVVLVDRVAPPADLAADARVQPLLGDLVEQLAA
GALPLAEVQAVFHLAAAVSGECEADFDLGMRSNLDATRQLLEGCRRAGHAPVFVFSSSVAVFGDSPEQPL
PAVIEDTTLPTPQNSYGIQKFIGEQLVADCTRKGFVQGRNVRLMTVSVRPGRPNGAASSFLSGMLREPLA
GERARCPVAPGTAVALSSPGNTVRGIIRASTASAAEWGARTAVNLPALTTTVGEMAQALERVAGKEATAL
IDWEPDAQIARIITGWPSRFAPKRAQALGLAADESFEAILRDYVRENPQAVKLAVKG
>gi|319762802|ref|YP_004126739.1| type iii effector hrp-dependent outer domain protein [Alicycliphilus denitrificans BC]
MGKLLLGCIADDFTGATDLANNLVRAGMRVVQAIGVPDGPLAADVDAVVVALKSRTNPVDEAVAQSLAAL
RWLQGQGAHQIYFKYCSTFDSTPAGNIGPVTEALMDALGTEFTIATPAFPDNKRTVFKGYLFVGDVLLSE
SGMQNHPLTPMADPNLVRVMQSQCRRKVGLIDHAVVARGAAAVTERIAQLKAEGVAIAIVDAVSNDDLLR
MGPALAALPLVTAGSGVAMALPANFGFAPSPAASVLPFGSGLRAVVSGSCSLATNRQVQDFIARGGAALA
IDPLRIADGADVAAEALAWATPLLARGPVLVYSTADSGAVKSVQSRLGAEEAGAMVERTIASIARGLVER
GVRQLVVAGGETSGACVQALGITQMQIGPQIDPGVPWCHAQALGAGLHITLKSGNFGGDDFFTRAFEVLA
>gi|319762803|ref|YP_004126740.1| class ii aldolase/adducin family protein [Alicycliphilus denitrificans BC]
MTEAQAREEICRVGRSLFERGYAHATAGNISVRLDDGGFLITPTDACLGFLDPARLARLDAQGRQVSGDR
ASKTIALHTRIYAAARAFDAQTACVIHTHSTHCVALTLQPAEGELLPAITPYFVMKVGHVPVIPYHRPGA
PGAAEAVAQAIARYGAQGTPLRAVMLERLGPNVWHDTPAAAMATLEELEETARLWLLSSPKPAALDAAQI
DELRAAFGARW
>gi|319762804|ref|YP_004126741.1| hydroxypyruvate isomerase [Alicycliphilus denitrificans BC]
MPRFAANLSMLYGEHAFLDRFAAAAADGFKGVEYLFPYEFPAAEIARRLKDNGLAQVLFNAPPGDWAAGE
RGLACLPGREAEFREGFARALDYAAALDCPRIHVMAGLVPAGQTREALRPLYIDNLRWAAEQAAQAGRNV
LIEPINTRNIPGFFLNRQDDAHAIVQAVGAPNLQVQFDLYHCQIVEGDVAMKIRQYLPTGRVGHFQIAGV
PERHEPDIGELNHPYLFSVIDEVAAQCGWQGWVGCEYLPARGAVPGGTTAGLGWVRGLL
>gi|319762805|ref|YP_004126742.1| hypothetical protein Alide_2113 [Alicycliphilus denitrificans BC]
MPRFLSRLARRVRSAVAPIPDIGADLWLQTLNRYPFLAALPLADQAKLRALSALFLHRKEFSGAHGLVVT
DAMAVAIAAQACLPLLHWGEPGKALAWYDDFVGIVVHPAEALARRKAVDEAGVVHHYDEVLLGEAMENGP
VMLSWPAVQGAGREGHATSVVIHEFVHKIDMKNGGADGCPPLPPGFLGTANARAAHAAWRAAWEPAYEQF
RERVIIAERFGGEWPWLDAYGATAPAEFFAVACEAYFVHRERFAQEFPALLPVLDALFRPTQELQAK
>gi|319762806|ref|YP_004126743.1| metallophosphoesterase [Alicycliphilus denitrificans BC]
MAATVPPIAELAAPAAWRTVDFVSDLHLEGSHPATVQAFARYLAATPADAVFLLGDLFEVWVGDDAIDER
GSFESECCELLAQAARRRPLFFMHGNRDFLVGEGFTRRTDIPVLADPTALTFAGRHWLLSHGDALCLQDV
EYQRFRALARDPQWQAQLLARPLHERRAQGRSARSESEARKQAGTAPYADVDNAAAIEWLRAARAGALIH
GHTHLPANHVLAPGLARHVLTDWDLEATPPRAGVLRLTDAGLQRIPLAPT
>gi|319762807|ref|YP_004126744.1| peptidylprolyl isomerase [Alicycliphilus denitrificans BC]
MSNPQVELHVTINVAETATPGVITLELDSANAPKSTENFLAYVNKGHYDGTIFHRVIKGFMIQGGGFTPD
MKQKPTDTPIENEAANGLKNDQYTIAMARTGDPHSATAQFFINVVDNGFLNHTAPTPQGWGYAVFGKVVK
GQDVVDAIKKVRTTRKGFHDDVPFDAVVIDKAVAL
>gi|319762808|ref|YP_004126745.1| peptidylprolyl isomerase [Alicycliphilus denitrificans BC]
MISRRTSALALAGAMLGTLLGTPPALAQTAAAPQVKLATSMGDIVLQLDAAKAPRTVENFLSYVRDKHYD
GTIFHRVIDGFMIQGGGFTPDMQQKPTKAPIQNEAANGLKNDRYTIAMARTADPNSATAQFFINVKDNAM
LNAPSPDGHGYAVFGKVVSGTEVVDKIKAVATGNRGPYQNVPTTPVIIQSATLVK
>gi|319762809|ref|YP_004126746.1| erfk/ybis/ycfs/ynhg family protein [Alicycliphilus denitrificans BC]
MPLSPFPFGHALATAVMAGLLAAPAAAAQGEKKARQPSGKKAQQRKPVRAAAPAPLRDGDAERRLLEIYR
LTAEGHARQALPLAERLVRDHPNFQLAQLALGDLLAARARPVGRVGDVAMPPPAAAARPMPAQIPGISLA
SAAAAPTPQALPPAAIDTLSDLRAESRLRVDALKARPPQGSIPAQFLELSARTRHAIAMDASRSRLYLFE
NTDKGLVLVADYYASVGKLGTEKQAEGDQRTPLGVYYITSRLDPATLKDFYGAGALPINYPNPLDLRRGK
TGSGIWLHGTPPSQFSRAPLATDGCLVLANPDLERLLKTVEPRTTPVVIARELRWVKPQALQAERQSFHD
VLEAWRSAKSQGDTQRLLGFYAPEFQSHRNQDLQQWSQALQAEAQALQGRAVALKDKSVLRWTDSSDTMV
VTFGEVTEGTRTGPVKRQYWTRKGARWQIFFEGVIG
>gi|319762810|ref|YP_004126747.1| tetratricopeptide tpr_1 repeat-containing protein [Alicycliphilus denitrificans BC]
MKHASCPLSRLLRIATLSALLGMPLAHAADDYSEITQLLRTGKAQEALVKADQRIAANPRDPQLRFLRGV
AQADTGKQADAIATFTKLTEDYPELPEPYNNLAVLYANQNQLDKARAALEMAIRTNPSYATAHENLGDIY
AKLAGQAYNKALQLDATQANSLRPKLALIRELFSADAKATVSKVASSARAPAPAPAAAPTPAPAAAPAPA
AAPAPAPAPTPAPAAAPQAAPAAPADAPAPAAPKAAASSSAEKDVAKAVHAWAAAWEGQDMNAYLGAYAK
NFRPQNQSSRAAWEKERRERIVGRAKITVDISDLRVHVDGDKAQARFRQQYSSGSMNVSSRKTLDMVNQG
GHWSIVRESTGG
>gi|319762811|ref|YP_004126748.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MSLRIYNTLSRALEDFSPLEAGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRASGLAVTYVRNITD
IDDKIIRRAVENGETIRSLTDRMIDALHEDADALGIERPTHEPRATEYVPQMLSMIGTLQSRGLAYQAAN
GDVNYAVRKFPGYGRLSGKSLDELNAGERVAVQDGKLDPLDFVLWKGAKPEEPAEVKWQSAYGEGRPGWH
IECSAMGCTLLGESFDIHGGGADLAFPHHENEIAQSEGATGKPFARVWMHNGFINVDNEKMSKSLGNFFT
IRDVLKEYDAETVRFFVVRSHYRSPLNYSDVHLDDARAALKRLYTALSLVAPAPVAIDWAEPHAARFKAA
MDEDFGTPEAVAVLFDLAGEVNRSKSPGAAGLLKALGGHLGLLQGDPQAFLKAGAGLDEPAIQARIAARA
AAKAAKNFAEADRIRADLLAQGIVLKDSAAGTTWEAAQ
>gi|319762812|ref|YP_004126749.1| DNA-3-methyladenine glycosylase ii [Alicycliphilus denitrificans BC]
MAAIKKTAEATPPDYWAEACKHLTKRDRVMRRLIPQVGDVAPYPRGDAFSTLARSIVGQQVSVASAQRVW
DQFAALPRSMTPRSVLKLKVDDMRAAGLSARKVEYLVDLALHFDSGQLHVKQWGQMDDAAIVAELVAIRG
ISRWTADMFLIFHLARPNVLPLDDTTLIQGISRHYFSGDPVSRSDAREVAEAWKPWCSVASWYIWRSLAP
LPVDY
>gi|319762813|ref|YP_004126750.1| acetyl-CoA carboxylase, carboxyl transferase, alpha subunit [Alicycliphilus denitrificans BC]
MAKKTFLDFEQPIAELESKIEELRYVQNESAVDISEEIDQLSKKSHQLTKDIYSDLTPWQITKIARHPER
PYTMDYVREIFTDFVELHGDRHFADDQSIVGGLARFNGHACMVLGHQKGRDTKERAARNFGMSKPEGYRK
ALRLMKTAEKFRLPVFTFVDTPGAFPGIDAEERGQSEAIGRNIYEMAQLEVPIVTTVIGEGGSGGALAIS
VADQVIMLQYSIYSVISPEGCASILWKTSDKAQDAADAMGITAHRLKALGLVDKIVNEPVGGAHRDHKQM
AAFLKRALGDAYRQLSDLKPKELLERRYERLQSYGRFTDTKADSR
>gi|319762814|ref|YP_004126751.1| tRNA(ile)-lysidine synthetase [Alicycliphilus denitrificans BC]
MTQSFDAAMHAFAPRLPLAVGLSGGADSTALLLACAGRWPGQVHAFHVHHGLQAAADGFEQHCVALCARL
QVPLSVRRVDARHASGQSPEDAARQARYKAFEALALDNQARAAIGTIALAQHADDQVETLLLALSRGAGV
AGLAAMPAQWERGGLHWSRPLLRVAGADVRAWLQQQGEHWVEDPTNADERYTRNRIRRRLLPALQQAFPH
FRDTFARSCAHAAQASELLQELARADLAAVGQPPRIAALRLLSRARQANVLRHWLRSAHGTTPASAQLDA
LLDQIAACATRGHRIHLKVGSGHVVREAGALGWYNRPVLDLISARDGGAPKQPSQ
>gi|319762815|ref|YP_004126752.1| aspartate kinase [Alicycliphilus denitrificans BC]
MALFVHKYGGTSMGSTERIRNVAKRVAKWARAGHQVVVVPSAMSGETNRLLALAKDLAPARASAAFHREQ
DMLAATGEQASSALLAIALQAEGMEAVSYAGWQVPIRTDSSYTKARIESIDDKRVRADLDAGRVVIITGF
QGIDDEGNITTLGRGGSDTSAVAVAAAMKADECLIYTDVDGVYTTDPRVVSQARRLKSVSFEEMLEMASL
GSKVLQIRSVEFAGKYKVPMRVLSSFTPWDIDINEEAKSGTLITFEEDEQMEQAVVSGIAFNRDETKISV
LGVPDKPGIAYQILGPVADANIEVDVIIQNISKDGRTDFSFTVNHNDHARTLELLREKVVPALGAQEVVG
DTAICKVSIVGIGMRSHVGVAAKMFRVLSEEGINIQMISTSEIKTSVVIEDKYLELAVRALHKAFDLDQP
AAA
>gi|319762816|ref|YP_004126753.1| cl- channel voltage-gated family protein [Alicycliphilus denitrificans BC]
MHQEPDFFHNLRQEFADGWRWVERSIVLAYAAAAGLCVVAFTLLSNLAFEWFMRLYHWHGGWAVLLWTPA
LTAAIVWATRRWAPGAAGSGIPQVMAAQEAALTGAQRSGLVSLRLSIAKIVLAGLGFLAGLSIGREGPSV
QVAAGVMHHARRWFGPRTGITGHALLVAGGAAGIAAAFNAPLAGVLFAIEELARKLESRASGLILSAIVL
AGLMGVSAFGNLTYFGRIQVAALGWDALLPGLCVALACGVLGGLFAKVMAASLTGAPNRFNRLRERFPIR
FAAAGGLVLAAIGLVTEGATFGAGSEAVKHMLAGHADVPAFFVTLKFIATWLSAWVGAPGGIFAPSLSIG
AGIGHNVSLFAGAAIAPALIAMGMAAFLAAVTQAPLTAFIIVMEMVDGHAMVLSLMAAAMLASLVSRMLA
RPLYGALAQHMLKMALPAPEEAQGGPARQRQ
>gi|319762817|ref|YP_004126754.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MKAYIDRHRDDYGVEPICRALQMAPSCYWRHAARQRNAQLRSARAQRDEGLKADIQRVWHANWQVYGADK
VWLQMNREGIVVARCTVERLMRAMGLQGARRGRAVRTTTPDTSAPCPLDHVNRHFHASRPNELWVSDFTY
VSTWQGWLYVAFVVDVYARRIVGWRVSRSMQTDFVLDALEQALYDRQPAAHALTHHSDRGSQYVSIRYTE
RLDQAGIQPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGI
PPAEAEANYWRQLAASDTSTKVST
>gi|319762818|ref|YP_004126755.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319762819|ref|YP_004126756.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus denitrificans BC]
MKVPHLQRRTLALIAAIVPLAALFVYVVLRSGPLAPVAVTLGTVQSRAVAPALAGIGTVQARYIYKIGPT
AAGRVQRLDVHVGDMVRAGQVLGEMDPVDLDERIRAQQAAIKSAEAGLRQAEARQSYALDQARRYGQLVS
VRATSEENLATRQQELAVADAALAAAREDASRLRSELQALRAQRGNLRLVAPVAGLVAARDADPGTTVVA
GQAVIRLMDPASLWVDARFDQISAQGLAAGLPAEVVLRSRHGQPLAARVLRTEPLADAVTEELLAKVIFD
ALPRPLPPIGELAEVTVHLPPLPEAPTIPNAALRTVDGQRGVWKFKDGELAFAPLRLGRADLDGQVQVRE
GLAVGDAIVVYSERTLGPKSRVHVVERIAGVSP
>gi|319762820|ref|YP_004126757.1| hypothetical protein Alide_2129 [Alicycliphilus denitrificans BC]
MISLAGRDILHAWGKFVFTGIGLGLLIGVTLTMAGVYRGMVDDGRVLLDNSGADLWVVQRDTLGPYAESS
SVPDDLWRSLRAMPGVAQAANVTYLTMQVGHGDKDVRAMVVGVAAGGPGVPGWPPQLVAGRQITRGHYEA
VADAAAGVRLGDVLKIRRNRYTVVGLTRRMVSSAGDPMVFIPLKDAQAAQFLKDNDAVLMQRRRTEANPA
FNRPAVPDLLDAVIASQTSNGQVNAVLVRLRPGFTPQEVADPIRLWLRLTVYDRAQMEGILVGKLIATSA
KQIGMFLVILALVSAAIVAFLIYTLTMDKIREIAVLKLIGTRNRTIAAMIVQQALVLGLIGFVVGKITAT
FAAPLFPKYVLLVPFDTVAGFAAVMAICVLSSVVAIRVALRVDPAQAIG
>gi|319762821|ref|YP_004126758.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MKRQGIRIERLSKRYGAGDTAFLALKDVNMQVAPGEVVGLIGPSGSGKSTLLKCLGAVIDPTSGRMTLDD
RVIYDDGWKVRDLGALRRDQIGFVFQAPYLIPFLDATDNVALLPMLAGVPNDEARRRALELLTALDVQHR
AKAMPSQLSGGEQQRVAIARGLVNRPPVILADEPTAPLDSQRAMAVIRILNDMARRLQTAVIVVTHDEKI
IPTFKRIYHIRDGVTHEEAGEGRGFE
>gi|319762822|ref|YP_004126759.1| lytic murein transglycosylase [Alicycliphilus denitrificans BC]
MARAVTMGAMRSLLLPTAIGLAVLAGCASQPTPPAAPAPIPATPPPAAATPAPLPAPEPEPAASGTADTI
AGFHAWLEAFAREALAAGIHTQTVDAMLARAQWQPRVVELDRAQPEFTRTPWAYLDSAVSPQRVAQGREQ
RRLHAAALEAAEQRYGVPASIITAIWGMESNYGRNFGSFSTIDALATLAYDGRRRDWARGELLAALRIVD
QGDMAADALVGSWAGAMGHTQFLPSVFLRFAVDADGDGRRDIWGSVPDVAASTANFLAHSGWKSGQPWGV
EVRLPPGFDYARAELGVRQTSDAWAAEGVRGIDGAALPQLPDASILTPAGARGPAILVGPNFRALLRYNN
SVNYALAVGLLARRIDGGAGLSTPWPRDLQPLSRSDVKTLQELLNARGLDAGTPDGVAGPATRAGVRRYQ
QSLGLPADGYATRELLQQLQEP
>gi|319762823|ref|YP_004126760.1| exodeoxyribonuclease i [Alicycliphilus denitrificans BC]
MHTFLWHDYETFGTDTRRDRPAQFAAIRTDAQLNEIGEPLMLYCRPANDYLPDPQSCLITGITPQLCLEK
GVPEHQFAARIEAELALPGTIGVGYNTIRFDDEITRFMFWRNLMDPYAREWQNQCGRWDLLDVVRLAYAL
RPDGIEWPVADGKTSFRLENLTKANGLAHEAAHDALSDVRATIALARLVRARNPRLFDFALGLRKKDRVA
AELRLPATAQTARPFLHVSGMFGAERGCLAVMWPLASHPTNKNELLAWDLAHDPAELATLSADEIRQRLF
TRAADLPEGVTRLPLKSVHLNKSPMVVGNVNTLTPAVAQRWGLDMAQAARHAEAARRLPDMSAIWAQVFQ
RPQEGPVDVDQDLYGGFLGNEDRRRLNRLRALSPEELARERPGFDDERLAELVWRYRARNFPQTLSPEEH
ERWEAHRVAMLVEGEGGGLTFDALFERLDELGEQADDERTEAILGAIYDYAEGIAPGM
>gi|319762824|ref|YP_004126761.1| silent information regulator protein sir2 [Alicycliphilus denitrificans BC]
MPKASPPACDPGLAIGPLRDWLRLHPRLFVVTGAGCSTGAGIPDYRDENGDWKRPQPVTYQAFMGDAATR
RRYWARSLAGWPVMGGARPGAAHHALARLERQGRIELLLTQNVDGLHHAAGSRRVIDLHGRIDTVRCMDC
EARTPRAELQRELLRRNPAWAALQASAAPDGDADLEGRDFQSFDVPPCPRCGTGLLKPDVVFFGESVPRG
RVDAAHAALARADAVLVAGSSLMVYSGYRFVQAAAQRGLPVAAINRGRTRADGLLALKLEADVGQTLEQL
SY
>gi|319762825|ref|YP_004126762.1| hypothetical protein Alide_2134 [Alicycliphilus denitrificans BC]
MNRGEPDPSLPPHRALALESLVPSLRLMVGLVIAALIIAGLYFGRTILVPLVLAFLLSFVLAPLVDRLRR
LRVPDVAAVLAVVLATLLVLGAGATLVANEARALSAELPSYQSTIRGKLRNLRKQMRAPGMFDGAKRTLD
IVQREVDAATPATPAAVQKVQVLPPPVSPAQQAMAALGSVSGPLADAALVLVFVVFILLDRVDLRDRLLR
LWGRDLHRATDAMDEAGGRITRYLTMQLLVNATYGIPLAAGLWFIGVPGALLWGVLAAVMRFVPYVGPLI
SSAFPVALAFAVDPGWSLVLWTIGLIAVLELISNNVVEPWLYGASTGLSVMSLIVSATFWTALWGPVGLV
MSTPLTVCLLVVGRYLPQLAFLDVLLGSQPALDGPTRVYQRLLAGDADEAIELSAQQIDAAQGGVREFYA
GTGLSVLRMAVGDHARAATPHHRLRVVEGMDELLDELAEQYPPPPAIAAARPGVACIGGKWEVDQLAARM
LAHALQLQGCPAQAHSRGAQHEAGPALDGAQVVCLAWLAPDPAAVSASARHLCRRVKRRWPHVQVVLALL
NGTEGLPDEGVLGQFGADAVVTSFEETLLCITRIQGASASNHYENAPVPEGDAARVAALHASGALHSDAL
AALCQGAAQRAADIFDVPTAMISLVDAGTQHVRCVHGVHGGGAMPRALSLCGHVVAGGGPLVVPDLARDA
RFAGNPLLRERALRFYAGVPLRDGEGHVLGTLCLMDAEPRSFDEREARLLQAMADDLMASWRGERAPGQG
GTDAPPPSATVGQPVPQ
>gi|319762826|ref|YP_004126763.1| gcn5-related n-acetyltransferase [Alicycliphilus denitrificans BC]
MIESNRLSTPRLRLRQWTAADREPFAALNADPEVMRHFPAPLTRTQSDAMAVRIEALIAERGWGFWAADS
LEDGVPRFMGFVGLHTPAPDLPFSPCVEIGWRLARPFWGRGLATEAARLALRTGFEGLGLEEIVSFTAVG
NQRSRAVMRRLGMRECPHEAFDHPALPAGHPLRAHCLYRLARADYWGTG
>gi|319762827|ref|YP_004126764.1| uracil phosphoribosyltransferase [Alicycliphilus denitrificans BC]
MSNVHVIDHPLVQHKLTLMRKKDASTNSFRRLLGELSTLMAYEVTRDMPLQDVRIETPLETMTARMIDGK
KLVLVSILRAGNGFLDGMLNVVPGARVGHIGLYRDPATLQPVEYYFKMPSEMAERDVIVVDPMLATGNSA
AAAVDRLKKLQPRSIKFVCLLAAPEGVATMQKAHPDVPIFTAAIDRELNDHGYILPGLGDAGDRIFGTK
>gi|319762828|ref|YP_004126765.1| pyridoxal-5'-phosphate-dependent protein beta subunit [Alicycliphilus denitrificans BC]
MDLPRPPLPTYEDVAEAAHRLKGMAHHTPVLRSSTADALLGAELFFKCENLQRMGAFKFRGAFNALVQFS
DAQRARGVLAFSSGNHAQAIALSARLLQMPAVIVMPEDAPAAKIAATRGYGAEVVTYDRFTEDREAISQR
LASERGMTLIPPFDHAHVIAGQGTVAKELFEEVPHLDYLFVPLGGGGLLSGSLLAAQRLAPQCRVIGVEP
EAGNDAQQSLRAGKIVRIGTPRTIADGAQSQALGSLTFPIIHAGVSDIVTATDAQLIEAMHFFAERMKIV
VEPTGALGLAGARHGGVALRGRRVGVVISGGNVDMARYAQLLGTALAG
>gi|319762829|ref|YP_004126766.1| hypothetical protein Alide_2138 [Alicycliphilus denitrificans BC]
MGAQWKAKGKALVADAKGRLFGKLVKEIIVAARAGADPAGNSRLRLAIEAARKASMPKDTLERAVKKGSG
VGGDAVNYERVIYEGFAPHQVPVMVECLTDNVNRTAPEMRVCFRKGQMSAVAWDFDHVGMIEGEPAQPGA
DAELAAIEAGAQDFEPGEEDGQTLFLTDPTDLDAVAKALPEFGFKVLSAKLGYKARNPVSMASLPPEAQE
EVQAFLAGIENNDDVQNVFVGLVD
>gi|319762830|ref|YP_004126767.1| cytochrome c oxidase accessory protein ccog [Alicycliphilus denitrificans BC]
MPDPMHSNDRQPKKVIPIVPESVSLYEARKKIQPRSISGKFTSWRWIMVWVTQLVFYGLPWLEWGQRQTL
LFDLGGLRFYLFGLVLYPQDFIYLTGLLVISALALFLFTATAGRLWCGFACPQTVYTEIFLWLERRIEGE
RSARLRLDASGWTFEKLWKRTAKHGAWIFVSLWTGFTFVGYFVPIRQLGGELLALQGWQIFWTLFYGLAT
YGNAGFLREQVCKYMCPYARFQSAMFDKDTLIVTYDAQRGEPRGARGKNGAPAGQGDCIDCTLCVQVCPV
GIDIRDGLQYECIGCGLCIDACNSVMDKVGLPLGLIRLATTNGMAGRWSSARMLRRVVRPRVVMYTAVLV
ALSAAMIVSLAARTPLKVNVVRDRAALSRIVPGGKLENVYRLQVMNATEAPQRYRIGARGIDGIEVASEP
EIAVGATESQWVAVRLRIPYGAAPEGAHPVYFEVESLGPALARVSEKASFLVPR
>gi|319762831|ref|YP_004126768.1| cytochrome bd ubiquinol oxidase subunit i [Alicycliphilus denitrificans BC]
MLGFTALELARIQFGFTISFHIVFPAITIGLASYLAVLEGLWLWRKDPVYRDLYHFWSRIFAVNFAMGVV
SGLVMAYQFGTNWSHYSSFAGSITGPLLAYEVLTAFFLEAGFLGVMLFGWNKVGSGLHFFSTVMVALGTL
VSATWILASNSWMQTPQGFEIVDNVVVPVNWFEVIFNPSFSYRLAHMTMAAFISTALFVGASGAWHLLRG
NDNPRVRTMLSMALWMLIAAAPLQIAIGDMHGLNTLEHQPAKLAAMEGHWENKPGEGAPLLLFGWPDMQA
EATRYAVEVPRLGSLILTRSWDGQYRALKEFAPQDRPNVLLVFWSFRVMVGLGMLILLLALWGAWLRWRG
RLYGSQAFLRFTAWMGPAGLIALLAGWFTTEVGRQPWIVYGVLRTQDAVSNHSAQVMGATLIVFIVAYFA
VFGIGVRYMLKLVSQGPQAHEGASDAEAPGHRPARPLSAAPGAASRTHHQEG
>gi|319762832|ref|YP_004126769.1| cytochrome d ubiquinol oxidase, subunit ii [Alicycliphilus denitrificans BC]
MGIDLPVIWFVIIVFGLMMYVIMDGFDLGIGILFPFVRNRESRDVMVNTVAPVWDGNETWLVLGGASLMA
AFPLAYAVVLSALYLPLLLMLLGLIWRGVAFEFRFKADESHRHFWDVAFTAGSYMATFFQGVALGAFLNG
FEVHNGNYIGGAFDWLSPFSLFAGLGLVVAYALLGATWLIIKTEGSLHDRMVSLARPVTLALLVAIGIVS
LWTPLTHPGIAQRWFDWPNIALFAPVPVLVLLTGYGLLRSLRGGDPSVTPFMLTLCLLFLGYTGLGISVW
PHIIPPDITIHEAAAPPQSMGFALVGALLIIPVILTYTAWSYYVFRGKVRQGEGYH
>gi|319762833|ref|YP_004126770.1| hypothetical protein Alide_2143 [Alicycliphilus denitrificans BC]
MASSTSRRTVSWWRRVGWLVLIWAASVAALAVMALFFRVLMRLAGMSS
>gi|319762834|ref|YP_004126771.1| lrgb family protein [Alicycliphilus denitrificans BC]
MIAPSAFAIALAATLLTVAAYAVALWAYQRSGWGLLLPVLTGAATVVALLVAMGVPYGVYREGTGLLSWL
AGPATVALAFPLYRQWGRLRGIWWPVMGALLAGSVTAVVSAIGIAWLLDADWPLMMSLAPKSATMPVAMP
VAESTGGAASLSAVAVALTGIAAAVLSGGLFGLLGVRSGMVRGFALGAAAHAIGTARAFQIGETAIGFAA
LAMSLNAIATSLLVPLIVGLL
>gi|319762835|ref|YP_004126772.1| lrga family protein [Alicycliphilus denitrificans BC]
MSRTELRIGAMASRTLQFSLGFVVLAALLSAGGRLVRWLHLPIPPAIVGMVLLLAVLACFGRLVAAVEAA
STPLLKHMMLFFIPTVAGVMEQFQTLRTGWLPFVVACVAGAALTLAVTALTLQKLLKRQGTAG
>gi|319762836|ref|YP_004126773.1| regulatory protein gntr hth [Alicycliphilus denitrificans BC]
MKRYEQLAGDIAESIANGTLPPGARLPSVRQTTANRGVSPSTVFQAYYLLEARGLIQARPRSGYYVASGA
AGVSEPEPSRPSGEQQDVEVSELVFQVLEHMRDRDLIPLGSAFPDPSLFPLDKLAMAQSKAMRGLDPWRT
VEHLSPGNPELRRQITLRYLATAFAIDSNELIVTNGAMEALNLSLEVTTRPGDLVAVESPTFYGALQALE
RLNLRAIEVPTHPRTGVDVPVLATILERHLVKACWFMPNFQNPLGSLMPDEAKQALVQLLAERQIPLIED
DVYGDLYFGTHKPRPAKAWDTQGLVLHCSSFSKTLAPGYRIGWVAAGRFAEAIARRKLMSSLAAAVPSQE
ALSRYLQQGGYDRHLRRLRLTLLGNRAAALRSIAKHFPAGTRASPPEGGYFLWIELPLGVDALALHWLAL
ANHVSSAPGHLFSADHRFRRHLRINFGQADSSELEMALKLLGKLAGSLVQRTPRS
>gi|319762837|ref|YP_004126774.1| glutathione s-transferase domain protein [Alicycliphilus denitrificans BC]
MIDLYYWTTPNGHKITLFLEEAGLPYRIHPVNIGRGEQFAPEFLRIAPNNRIPAIVDQAPADGGAPLSIF
ESGAILLYLADKTGRFIPQDLRGRNEALQWLFWQMGGLGPMAGQNHHFGQYAPEQIPYAIDRYVKETARL
YGVLDKHLAGGRDYIAGEYSIADMACYPWIVPHERQRQDLTDFPHLQAWFERIRARPATERAYALAQTIN
TAPTVDEAAKKVLFGQDAGTMRR
>gi|319762838|ref|YP_004126775.1| hypothetical protein Alide_2148 [Alicycliphilus denitrificans BC]
MAEPLLIAQRDSTQCHLLPGLANRHGLITGATGTGKTVTLQTLAEQFSRIGVPVFMADVKGDLTGISQKG
SIGDKLAKTLADRGLATPEPVACPTTLWDVFGEQGHPVRATVSDMGPLLLGRMLNLNETQLGVLNLVFKI
ADDNGLLLLDLKDLRAMLQHVGDNAKDFTTEYGNISSASVGAIQRGLLQIETQGGDRFFGEPMLNIQDFM
QTVDGKGVVNILAADKLMNSPRLYATFLLWMLSDLFEQLPEIGDPEQPKLVFFFDEAHLLFNEAPKVLVE
RIELVVRLVRSKGVGVYFVTQNPLDIPDSVLGQLGNRVQHALRAFTPRDQKAVKATATTMRPKAGLDIEA
AITELAVGEALVSFLDPKGRPSETERVYVLPPGSQIGPITDGQRRALIAGSLVAGAYDQAVDRESAYEKL
RGRADAAATNAAAAQGNAGAQNGGLMDGLNDVLFGSTGPRGGKKDGLVQTMAKSAVRTMGTSLGREILRG
VLGGILGGRKR
>gi|319762839|ref|YP_004126776.1| hypothetical protein Alide_2149 [Alicycliphilus denitrificans BC]
MAGHSKWANIQHRKGRQDEKRGKIWTRIIREITVAARQGGGDPAANPRLRLAIDKAKAANMPADRIKYNI
DKASGTLEGINYEEIRYEGYGIGGAAIIVDTMTDNRVRTVAEVRHAFSKYGGNMGTEGSVAFQFKHAGQL
IFAPGTSEDKVMEVALEAGAEDVVTDDDGAIEVLTAPGDFEAVKNALEARGLKAEVAEVTMRPENTVALE
GDDAARMQKLLDVIEDLDDVQEVYHNAEL
>gi|319762840|ref|YP_004126777.1| phosphoribosylamine/glycine ligase [Alicycliphilus denitrificans BC]
MKILVIGGGGREHALAWKLSQSPRTTKVYVAPGNGGTALSPRYENLPITDVVALREWAQANKIGLTVVGP
EAPLAAGVVDEFRAHGLRIFGPTKAAAQLESSKAFSKAFMRRHGIPTADYDTFTDPAAAHAFVDRLGAPI
VVKADGLAAGKGVVVAMTLQEAHDAVDFMLVDNKYGVTHNEGGARVVIEEFLEGEEASFIVLCDGKNVLA
LATSQDHKRLKDGDQGPNTGGMGAYSPAPVVTADVHARAMREVILPTVRGMEKDGIPYTGFLYAGLMIDA
TGHPKTLEFNCRMGDPETQPILMRLKSDLVEVLGAAVDGRLDQVELQWDRRTALGVVMAAHGYPDSPRKG
DAITGLPQDEDDAMVFHAGTQLGDDGVVRTSGGRVLCVTALADNVKQAQQRVYDVARGIYFDGAQYRRDI
GHRAVKGG
>gi|319762841|ref|YP_004126778.1| coproporphyrinogen oxidase [Alicycliphilus denitrificans BC]
MAQALNPAATAARVRGYLEGLQARITGALEEVEGEGGARFRSDAWRREAGSPLQGDGITRILEGGRVFER
AGCGFSHVSGPQLPPSATQHRPELAGAPFEAMGVSLVFHPRNPYVPTVHMNVRMIAAGDACWFGGGMDLT
PYYGFEEDAVHFHRACRDALAPFGEGLYPRFKTWCDEYFFLKHRGEQRGVGGIFFDDFSELGFEQSLAMT
QSVGDAFLGAYLPIVQRRMDMPWGERERDFQLYRRGRYVEFNLVWDRGTHFGLQSGGRTESILLSMPPLA
AWSYQRESEPGSPEAELTARFLQRRDWV
>gi|319762842|ref|YP_004126779.1| iojap-like protein [Alicycliphilus denitrificans BC]
MTTTSKSESAAKKDVTKLQRAIVDGLEDVKAQDIQVFNTEHLSPLFERVIVATGGSNRQTKALASSVRDA
VREAGFPKPRTEGEDNGEWIIVDCGQAVAHIMQPAIRQYYRLEEIWGEKPVRMKLGAAKPRKITASEDAS
AAPAKKAAAKKAPAKTAPAKAAAKAPAAKKAAPAAKKPAAKKAAVKTVVVNKPVAKKATAKAPAKKAAAK
APARKAPARKG
>gi|319762843|ref|YP_004126780.1| hypothetical protein Alide_2153 [Alicycliphilus denitrificans BC]
MKLLIVAVGQRVPDWAASAYEDYAKRFPPELKVELKAVKTEPRGSKTLETLYAAERERIEAAIPRGARVV
ALDERGTSLTTKALAERLKGWQLAGDDVALVIGGPDGLDPAFRQAAHERIRLSDLTLPHAMVRVLLIEQL
YRAWSVNAGHPYHRE
>gi|319762844|ref|YP_004126781.1| maf protein [Alicycliphilus denitrificans BC]
MADFIYLASQSPRRRQLLEQLGVRHELLLPGPDEDAEGLEAVQPGESPAVYVQRVTALKLDAAVLRHARR
GLAPAPILCSDTTVALDGRIYGKPEGAQDAARMLSELAGREHQVLTAVALQAGARRLAALSVSRVRFAAM
TPAQIAAYVASGEPIGKAGAYAIQGPAAQYVENMDGSYTGIMGLPLFETAGLLREAGVLRD
>gi|319762845|ref|YP_004126782.1| cyclic nucleotide-binding protein [Alicycliphilus denitrificans BC]
MDIQQFDIPRYLAALPLFQEMTPAELQRLATGCRLRRYARGDTVFRVGMPCEEFHVTVTGQIKLFAISPT
GQEKVIELAGPGVSFAEALMFTDKPYIINAQALADALVLSVGKAAVVREIEDDPRFAMHMLAGISRRLHG
LVHDVQAYSLHSGMQRVIGYLLHSLPEDGSSSGHADCREAVALNVSLPVSKATIASRLSITPEYFSRVLH
ELEEAGLIRIDKRDIHIPNAARLASHTLQ
>gi|319762846|ref|YP_004126783.1| hydroxylamine reductase [Alicycliphilus denitrificans BC]
MPDLPCPALRAAAILALALAGPLHTAARAQAPDAPALYQQHCASCHGAQRTGLMGPALLPESLERTRPAE
VLRVIREGRQATQMAGYAGQLSGAEIQALADWVRTPVVPAPRWGEADIRASRIATPLPADEPVKPKWDAD
PMNLFVVVEGGDHHVSLLDGDRFTVITRFASRYALHGGPKFTPDGRYVFFGSRDGWITKYDLWRLQVVAE
VRAGLNMRNVAVSSDGRWVMAANYLPHSLALFDADLNLVKTYEAATLDGKASSRVSAVYDAAPRNSFVVA
LKDIPELWEISYDKQAAPIYDGLVHDYKMGEAIAKPGYLGVRRTPLSEPLDDFFFDQGYRHVLGATRPQA
GKSEAASAQVVNLDVRRKIADLPIAGMPHLGSGITFAWRGTTVLASPNLGGTGVDVIDMRSWKNLRTIPT
PGAGFFMRSHENTPYAWTDSMMSKDAKDRLTIIDKRTLEPVAEVREPGKTLAHIEFTRDGRYALASVWEM
DGALIVYDAATFREVKRLPMAKPVGKYNVWNKITRSEGTSH
>gi|319762847|ref|YP_004126784.1| radical sam domain protein [Alicycliphilus denitrificans BC]
MFRISQYMRELAQAQATGEYPITKDRKARGPVVIWNLIRRCNLTCKHCYALSADHDYAGELSLSEVFTVM
DDLKAFGVPALILSGGEPLLRADIFEISARARQMGFYTGLSTNGTLIDAPMARRIADAGFDYVGISLDGL
KATHDKFRRLEGAFDRSLAAIGHLDEVGVKVGLRYTMTAMNGHDLPALLDLMQEVGAHKFYFSHLNYAGR
GNIHRDKDARHQATRAAMDMLFDRAWAAAQAGSMDDYVSGNNDADGPYLLQWVRQHLPQWEEPLRQRLVA
WGGNASGQQIANIDNLGHVHPDTMWWHHDLGCVRDRPFSEIWNDVSDPLMAGLKQRPRPVQGRCGGCRHL
AICNGNTRVRAQQLTGDFWFEDPGCYLTDAEVGAASTPFEPVAKRRTGRTIEIAHA
>gi|319762848|ref|YP_004126785.1| asnc family transcriptional regulator [Alicycliphilus denitrificans BC]
MALDAFDRALIAATQGGLPLVARPYEAVGAMLGVPGEQVRERLAQMLAQGLIRRIGAVPNHYRLGYTANG
MSVWDVADERVSELGPLVAQLPGVSHCYRRPRHLPGWPYNLFAMLHGTSREAVEHQAQDIVALLGDACRG
HDILYSTAILKKTGLRLKD
>gi|319762849|ref|YP_004126786.1| hypothetical protein Alide_2159 [Alicycliphilus denitrificans BC]
MHTAQHHLDLALLNPWQRGFPLCREPFAVIGERLCMDAEDVLSRYQRLQRQGSLSRIGAVFAPGAGGASL
LAAMAVPPERLEAVAAIVSSHAGVNHNYEREHTTNLWFVATGPDAAQVEELLRGIEMDTGLPVQRLPMLR
PYRIDTGFDLRASQSPSSGATHWAQTPLQAHDQPLAALAERGLPLVQRPYDHWAEQLQQPVEAVLHTLQR
WLDERTVSRFGVVVRHHELGFTANAMTVFDVPKGEVDACGEALARVPGVTLAYQRARTRDWPYNLYCMVH
GRDRDSVRATVARAVAQAGLADKPQAMLFSLRRFKQTGARRFTPPAMPRTLPIHQKERCMLTPEDARLID
HLHGGFPLVDRPFAAVGEQLGWSEERVIERLHQLLAQGVLTRFGPLFQIERAGGQFVLAALAVPEERFDV
VNAVVNSFPEVAHNYRRTHRLNMWFVVAAESPALAQDAIARIQDAVGLEVFAFPKEEEYFVELRLPALPQ
TGERHGAGCL
>gi|319762850|ref|YP_004126787.1| cytochrome d1, heme region protein [Alicycliphilus denitrificans BC]
MKRRSLLSFAAAAPLLAGGCAATSASSATSKAPALLGTGDLGVVIERAQGALTLVNTSRREAMGRVEGLG
DLSHASVVFSRDERFAYVFGRDGALTRVDILEQRITHRVMQAGNSIGGAISADGSLVVAQNYTPGGIKVF
DAATLELLSDIPALMPNGERSRVVGLADLPQRRFIYSLFDAEAICIADCSNPRKPRVTTLAGIGRQPYDA
LLSPNGRHYIAGLFGEDGLAMVDLWDATPRARRILAGYGRGEKPLPVYKMPHLRGWAMAGGRAYLPAIGR
HEVLVVDTATWAEVGRIPVAGQPVFVMARPDGRQVWVNFSVPDYNRVQVIDTPSGQVIDTIAPGKAVLHM
EFTPRGESVWISCRDDDRVQVYDTHTRQLQASLAVDAPSGIFFTARAQRMGF
>gi|319762851|ref|YP_004126788.1| hypothetical protein Alide_2161 [Alicycliphilus denitrificans BC]
MARNAFLSLTLALAAAAAGAQTLAAAPAPERAAQLVRMVRQDCGSCHGMRLTGGLGPALTRQALAAKPPE
YLAAVIIHGIPGTPMPPWSALLSGTEALWIAQQLASGFPEEMRSQAP
>gi|319762852|ref|YP_004126789.1| hydroxylamine reductase [Alicycliphilus denitrificans BC]
MTAKRIARLVALAAATLVSATAMAQGSKPVSEAEKNYQAGSSPLVNEPMYQSMNPKAPPMTQAEFDLARK
IYFERCAGCHGVLRKGATGKPLTPDITLAKGTDYLKVFIAYGSPAGMPNWLTSGEMDEKQVDLMARYIQQ
DPPTPPEWSLADAKNTWKVIIPPEKRPTKKMNKYNIDNLFSTTLRDTGEVALIDGDTKEIINIVKTGYAV
HISRMSASGRYLFVIGRDAKINMIDLWMEKPDNVAEIRVGLEARSVDTSKFKGYEDKLAIAGSYWPPQFT
IMDGNTLEPLKIVSTRGMVVGTQEYHPEPRVASIVASHYKPEFVVNVKETGKTMMVDYSNLNALKMTEIG
SAPFLHDGGWDSSKRYFMVAANNSNKVAAIDAKDGKLAGLTEVGKIPHPGRGANFIHPKYGPVWATGHLG
DETISLIGTDPKKNKQYAFKEVAKLTGPGGGALFIKTHPKSKNLWSDAPLNPDPKVSQAVVVFDINNLDK
GYKTLPIAEWADLPNDGGAKRVTQPEYNKAGDEVWFAVWSAKDKASALVVVDDKTLKLKKVIKDPRLITP
TGHFNVYNTQHDVY
>gi|319762853|ref|YP_004126790.1| uroporphyrin-iii c-methyltransferase [Alicycliphilus denitrificans BC]
MSFIEDARWFTAAPAAGAPGMPTPPGRVTLVGAGPGDPELLTLRAVKALRGARLVLYDHLVGKEVLRYVA
EDADLIYVGKESSHHTLPQESIIDLMVRLARSGRNLVRLKGGDGFIFGRGGEEAQALAEAGIAFDVVPGI
TAAQGAGACAGIPLTHRDHAATLVFATGHLRGDNEVALDWEALARPRQTVVIYMGMGTLPVICEQLVRHG
LPASMPAALVEQASLPGQRCITGTLQELPALAQQHRVRPPALIVVGEVVALQPQLMRGMQAATML
>gi|319762854|ref|YP_004126791.1| ribonuclease, rne/rng family [Alicycliphilus denitrificans BC]
MQQDILINWSPQETRVAVVENGAVQELHVERALERGLVGNVYLGKVSRVLPGMQSAFIDIGLERAAFLHV
ADVWQRQEGGEAPMFARKNEPPVPIEKQVFEGQSLMVQVIKDPIGSKGARLSTQISIAGRLLVFLPQDDH
IGISQKIPQEERDALRARLQALAGDKSTGGGGGFILRTNGEDASDAELAEDIAYLRKTWAGIRQAALSRP
PTSLLYQDLNLLQRVLRDLVGEETQSIRLDSREQFAALQKFGRDFMPAAVAKLQLYKGERPIFDLYAIDE
EIARALGRRVDLKSGGYLIVDQTEALTTIDVNTGGYVGARNFDDTIFKTNLEAAGAIARQLRLRNLGGIV
IADFIDMLREDHQAAVLAEFKKQLARDRVKTMVGGFSQLGLVEMTRKRTRESLAHMLCEPCPTCHGVGEV
KTARTVCYDILREVLREARQFNPREFRVIASPKVVELFLDEESQHLAGLSDFIGKPISLQAETAVGPEEY
DIVLL
>gi|319762855|ref|YP_004126792.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MPCAGALAAQPQVLRAAVLTSLAGTQEVTLPHVLGPADFAPEGSRVRYRLDFELPAAAVAAAEDEPLGVY
VPKMSLAGRLMLNGERVGACDLGALEQLRCLHRPYLFVLPASQWRAGANTLEFEIFATSRQMNGLSSVSI
GPARLLGDGPYGWRRFVQVTVANGLAWAAFCMGGIALCVSLALRGECLYGWFGATALAIALSNLNYTLTA
PPVPPQFFSWFVFSVNQAMVLLLMLTVLSFFRRDWPWARRGLIAFMLLGPAVVWLSGSNRTVVALLYVPF
VLFGPLLAVAAIRWAWRSHRKADLWMALSFFSVVAVSFIDWFRLTGRSAFEGTYFVTYVIPSTIVVMGGT
LASQLATALKTARELTATLDKRVAERTEALTLANQRLEELSTTDSLTGLANRRHFDDILAKEWQRARRLR
HPLALLMIDVDHFKQFNDTYGHLAGDDCLRQVAQILKQRLLRGSDTAARFGGEEFAVITSMDLEGALHIA
ELIRQDVENHPVSVDGVDAVHVSVSIGLSALVPDGSRSPPQLISLADEALYRAKRAGRNCVRAAAAQCVA
A
>gi|319762856|ref|YP_004126793.1| aminotransferase class i and ii [Alicycliphilus denitrificans BC]
MTTPTFPSRLPNVGTTIFTVMSALAAEHKAVNLGQGFPDFACDPALVDAVTRAMQTGHNQYPPMVGVPAL
REAVASKIETLHARRYCPNSEITITAGATQAILTAILACVQPGDEVIVLEPCYDSYVPNIELAGGVVVRV
PLTPGSFRPDFARISAAITPRTRLIIANTPHNPSATVWTAEDMRALEELLAPTGILLISDEVYEHMVFDG
AEHQSAARFPGLADRAFIVSSFGKTFHVTGWKIGTVAAPAPLTAEFRKVHQFNVFTVNTPMQYGLADYLG
NPAPYLQLPAFYQAKRDLFRQGLEGSRLRLLPSTGSYFQCVDISAVSDLGEADFCQWLTREIGVAAIPLS
AFYGDGFDQRVVRFCFAKKDETLREALTRLRRL
>gi|319762857|ref|YP_004126794.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEDELGVDIFARHGKRLKRVTEPGQHVLRSI
ELIMREVGNLKRIGEQYSAQDSGTLAIATTHTQARYVLPVPVAKLREAYPKVNISLHQATPHEVARMVID
EVAEIGMATESLADYPDLVTLPCYEWQHVLVLPPSHPLAQKERVGLDDIAHEALITYHPSFTGRGKIDQA
FATRKLQPRIVLEAIDSDVIKTYVRLGLGIGIVAEMAVRDDPLGDLVVRPMGHLFGQSVARVAFKRGAYL
RNFVYKFAELLSDRLSRDLIARAMTGHVHDYEL
>gi|319762858|ref|YP_004126795.1| cobalamin (vitamin b12) biosynthesis cbix protein [Alicycliphilus denitrificans BC]
MQQARAAIILLAHGSRDPLWRQPIEAVAAHIRASQPLLAVRCAYMELCEPGLPAALAELAAQGAARISIV
PLFLGAGRHVRDDLPRQVQALAQAHPHIDLRLQPPIGEDDRVMALMAEIAASTAIY
>gi|319762859|ref|YP_004126796.1| permease yjgp/yjgq family protein [Alicycliphilus denitrificans BC]
MKTIRRLIYREVIVGVAFVTLAFLALFFFFDLVDELRWVGSNGYRMSHALLFVALSLPQHLYELLPITVL
IGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLTLGCAFVALTFAVGDYLAPISERAAALVRAQQLGQI
STGATGAWLKERQGDHSFAVNVRALTPDGHMRDVRVFEFDARGRVASTTVAAQATFDDSGDAWNLEQVKR
SVFEQRPNGDIRVTRRQEPTLLLHTRISPDMVAASLLKPDKMATIGLFHYIRHLEANGQSAQRYEIEFWR
KVFYPLSCLVMVVLSLPFAYLHFRSGGIAGYVFGGVMAGISFFLLNNVFGFAGNLQNWSPWLTAAAPGLI
YSLLSLAAFGWLVLRR
>gi|319762860|ref|YP_004126797.1| permease yjgp/yjgq family protein [Alicycliphilus denitrificans BC]
MLFDSSIRKELARSFGATLVVLITVVMTMMLIRVLGQASRGSVAPSDVMLVMGFTVLGQLSTILSLSLFV
TVVGTLSRMYRDSEMVIWFSAGRGLLSLLAPLLRFSWPIMLAIAALSLVVWPWANRQIQELKTQYEQRSD
VDRVAPGQFQESSNGSRVFFIDKDTPDANAASNVFIATNEAHRETITSAQSARIEIRNGERLALLHNGQR
LETMLDKPGLRISEFTEYGTLIDSGSQSDPEAGAIKTRDTWDLARDPSPRHQAELGWRLGLAFAALNFVV
LGLAVAIVNPRAGRSTSLAFALFAFMVYYNLMTVGQAWIGAGRFGLVPFMLALHGGTLLAGLLLLAARHN
RWSLRTLLSRGARA
>gi|319762861|ref|YP_004126798.1| peptidase m17 leucyl aminopeptidase domain protein [Alicycliphilus denitrificans BC]
MNFELKTLSLPDAAAHKCDLLVLLVPDGFKPQADALSVLAGRAIKDGDLELKPGKLLPLYGVPGIAARRL
VLLGCGKGNAQAVRQAVQALGATLKAPSVRRVALVFARDAEAGCVGAAVRALADASYVYTTTKPKADARA
LSRVTVGVPGGLETARPEFSISVALVAGIEYAREWANRPANHATPTLVGDAAKALAKHAGIQCKLHGPAQ
VAKLGMGAFLAVAQGSEQPLRFVELRYDGAARSQAPVVLVGKGITFDTGGISLKPAAEMDEMKFDMGGAA
SVLGVFRALAELRPAINVVGLIPACENMPDGRAVKPGDVVTSMSGQTIEILNTDAEGRLVLCDALTYAAR
FKPAAVIDIATLTGACVVALGGLRSGLFASDDELAGQLMAAGDAAQDPCWRMPLDDEYAEGLKSNFADLA
NVAGRAGGAITAAKFLQSFVGDVPWAHLDIAGTAWKSGAAKGATGRPVGLLLHYLLASASAPAAKRRAAA
PRRARAA
>gi|319762862|ref|YP_004126799.1| DNA polymerase iii chi subunit holc [Alicycliphilus denitrificans BC]
MHTPAGAAGMTEVAFHFNAPDKLAYVCRLARKAMRHDARVVITGAAQDLQQLDRMLWALGTTDFVAHCLE
DAGEEMLQLSPVVLARDACVCSHRDMLVNVGDTVPEGFAQFARLVEVVSQSDQADRSRARERWRHYVARG
YGIVRHDLVLREGA
>gi|319762863|ref|YP_004126800.1| hypothetical protein Alide_2174 [Alicycliphilus denitrificans BC]
MAGAKTPPRFVPTLTDVVHVPGDGRPPMAAQAAPVQPQAQAPAPQAPSQTPSPQDGVAASGGLPRDFEEY
VVHRVMQRVDVALDQRLREAIAQVVQEQTRFLVPRLRDEVESVVRHAVYEAVAQELADERGAR
>gi|319762864|ref|YP_004126801.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MQLKLKLTVAATIAAVASMAAAQGVTVVKIGNVAPMSGPQAHYGKDIENGVRMAIDDMNAQGVVIGGKKV
KLELVNEDDASDPKQGTAAAQKLCDAKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPSLTKPGYK
TTFRIIANDNALGVGLAMYAAETLKLKSVAVIDDRTAYGQGVANVFKRAAAEKGIKVVDEQFTTDKATDF
MAILTAIKAKNPDGVFFGGMDPQAGPMLRQMEQLGMANVKYFGGDGICTTELPRLAAGAKTIGNVICAEG
GASLAKMPGGLEWKKRYDAKYPGQYVLYSPYKYDATMLLVDAMKRAGSWDPKVYIPELLKSNYKGVTANI
KFEPNGELVNPAITLYVYKDGKKAPLN
>gi|319762865|ref|YP_004126802.1| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MNIVILDDYQDAVRKLHCAERLDPYSAKVYTNTVKGLGQLSVRLRDADVIVLIRDRTQITRQLVEKLPRL
KLIAQTGRVGSHIDLAACTEHGIAVAEGVSSPVAPAELTWALIMAAMRRLPQYISNLKHGAWQQSGLRTA
SMPPNFGLGCILRGKTLGIWGYGRIGQIVAGYGRAFGMNVRVWGREASRAQALSDGLQVAATRAEFFSQC
DVVSLHIRLTDETRGLVTLDDLSCMKPTALLVNTSRAELIEPDALIAGLNRGRPGMAAVDVFESEPILQG
HALLRLENCICTPHIGYVEQDSYELYFGSAFDNVVNYIKGTPTNIVNPGALQVRR
>gi|319762866|ref|YP_004126803.1| hypothetical protein Alide_2177 [Alicycliphilus denitrificans BC]
MEFFTTGSGVSFLTKQALQIEKLKSLRTFPSLTLGSGCSAGMRSLDRDPRIFTCRCAANSARLLLSGSMA
KSTRWPIKSCMSGVMPL
>gi|319762867|ref|YP_004126804.1| hypothetical protein Alide_2180 [Alicycliphilus denitrificans BC]
MTAWNFLRHFFVAGLGLAAAMVGGQAHAQAYVNATVSGQIAPGVYGRVDIGNGPAPVLLFPQPVVVAPPA
VYVPRSPIYMYVPPGHARHWSKHCARYAACGQPVYFVKEPPRRPGHFHGYRDRHDGRDHWRGHRRDDDRR
DHGHRGHGRHDR
>gi|319762868|ref|YP_004126805.1| hypothetical protein Alide_2181 [Alicycliphilus denitrificans BC]
MAHVSFSPPYVPPGQIVQQLRDRGYAVLQPRDTADWLGCELADLKALSSDWADLPPDEFLKDGGRYRRRR
HSCFIVDGMAVSQTPHRAHWQPVEYNALHGGMERWFAPMRDATVAVPVWGRLMRSVATLAQAALATRPER
WFIEAHQFRIDTAGGIGRPTPEGAHRDGVDLVAVFLVGREGVKGGETRIFEAAGPNGQRFTLSEPWSVML
LDDARMIHETTPIQPEGEGGWRDTLVLTCRRGGFQAEQN
>gi|319762869|ref|YP_004126806.1| uspa domain-containing protein [Alicycliphilus denitrificans BC]
MFKHILVPVDGSETSMKAVAKASGLAKAFGSAVTALYVIDPYPFTGVGADFAYGQAQYLSAATAEANAAL
DAAKSAVTQAGVTAVNTMVGEGHAVHDGIQRAVESTGADLIVIGSHGRRGLEKLVLGSVTQKVLGVSRVP
VLVVRE
>gi|319762870|ref|YP_004126807.1| hemerythrin-like metal-binding protein [Alicycliphilus denitrificans BC]
MALLVWVPELDTGIPEIDRQHRRIVDYINRLYELRSTQDREALGDVIGEMVDYTLSHFVFEESLMESSGY
LFSGPHKKVHELFTRKVAEMQSRFDAGEDVTDELHGMLSRWLFNHIRNEDHGYVDTAKAYLRMAQQGGPA
AEKERLKAELLQELEQRQKKKGLLARLFGG
>gi|319762871|ref|YP_004126808.1| hypothetical protein Alide_2184 [Alicycliphilus denitrificans BC]
MLLRRHILSLAALTCALGAPAVQAQGAYPSKPIRMIVPFPPGGGTDILARLVSSKLTEVNKWTVVADNKP
GAGGTIGITEAVKAAPTGYDLVMGQKDNLVIGPWLYKNLPWDPTKDLTAVAHVAYTPVVIATSASSRFKT
LADVVAAAKAAPGTITYGSPGNGTSIHLAGDLFEKAAGVKLSHVPYKGSNPALMDALAGNVDLLVSSLPS
AMGQIKAGKLHPLAVTSAKRSSSLPDVPTVAESGFKGFDVSTWYGVFAPAGTPAAVVKTLNTEVNKLLAM
AEVKAAINAQGAEPQAMTPEQFSTLLKTEYQQWKGIVEASGAKIE
>gi|319762872|ref|YP_004126809.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MSREVVVVSAVRTAIGTFGGSLKDVPPTELGATVVRESLARASVQGQDVGHVVFGHVVNTEPKDMYLSRV
AAINGGCAEGTPAFNVNRLCGSGLQAIVSASQSILLGDADIAIGAGAENMSRAPYASLATRFGARMGDTK
MVDMMVGALHDPFHIVHMGVTAENIAAKWGITREEQDRLAVESHNRAERAIQAGYFKDQIVPVMLKSRKG
EVAYATDEHFRAGATMEDMAKLKPVFVKENGTVTAGNASGINDAAAAVVLMEAKTAQARGAKPMARLVAY
AHAGVDPKYMGIGPVPATQLALKKAGLTVKDLDVIEANEAFAAQACAVTRDLGLDPAKVNPNGSGISLGH
PIGATGALITVKALHELQRIQGRYALVTMCIGGGQGIAAIFERM
>gi|319762873|ref|YP_004126810.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MTQQLYILTGASRGMGLAMARQLLQPGHTLVCMARHTQPELTTGAPAGAVLEQWTVDLSQARQAAQQLHA
WLAAQPAGRYAGATLINNAGVIPRIAPLSACTSAQDMAGLANALRVGLEAPMLLTAAFLGATEAWGAIPR
KVLNISSGLGRRAMASQASYCAAKAGMDHFTRCLALDEASKPHGAKVCSLAPGVIDTDMQVQLRGANPAD
FPDVQNFASLKTGGMLTAPAAAAARVLAWLQRPDFGSNPVADVRDA
>gi|319762874|ref|YP_004126811.1| pseudouridine synthase [Alicycliphilus denitrificans BC]
MSADPPRAAHAGVDHVHADDTLLVLDKPAGLLCVPGRGPDKQDSLSTRAQALWPDALIVHRLDQPTSGLV
LMARGGAMQRALSHAFAQRLVHKRYQAVVAGLLRPARGSAGEWSEIALPIAADWERRPLRVVDAGRGQAS
LTRWRVLAHDEAGGTTRVELEPVTGRTHQLRVHLAALGHPILGDALYADAATQARAPRLLLHACALGFGH
PLHGGWCAFASQPPF
>gi|319762875|ref|YP_004126812.1| pas sensor protein [Alicycliphilus denitrificans BC]
MSHPDLSFLLRDEQPASDPSPAPVEPSERRGPGRASGAIAELIAELRASQAELEAQNKVLRYSQAAAESA
SERFEALFSNVPLSLMVLDEHDVVVQANSMAQRSFQPSERDRPLTALMPFVSPRHAARVRATFAAALESG
TAEANEVVFEIDEHRHITGDLHIARIEAHTDDETPLTQFLCAVIDQGPLLAERQALQRSAQELQERNAQL
HASERRLEAVINSALDAIICVDQRERITVFNPTAAMLFQCATSDALGSPLSRFLPQAQQVMAFAQLTTQA
ALGEMTALTASGRELAVEISVSFERHAEGETTTVFARDLTGRKREEARRSALEAQLRESHKMQAVGTMAG
GIAHDFNNILHAILGNVELAKADGTPGTPLHESLLEIDKAGRRARDLVRQILTFSRNEAPQRSAVALAEV
AHDTERLLRVTLPPEIELSMHLPQDLPPLLADPTQVEQALLNLCTNAMHAIGSARGRIQVDAALVQPEQR
LRESLGMAAGDYVALRVQDNGPGMDEATLSRIFEPFFTTKPVGQGTGLGLAVVHGVMRTHGGGVDVHSTP
GQGSRFTLYFPVATQAAHAPPAAAAPRTAPKAPAPSAGDRQRHVMYVDDDAALVFLVQRLLRRRGYEVSG
FTDPHEATDALRAAPGRYDLLVTDYNMPGYSGLDLVRAARAIRPDLPVALASGYVTAEIEQAALAEGARA
LIHKPNDVEELCATVDRLAHER
>gi|319762876|ref|YP_004126813.1| peptidylprolyl isomerase [Alicycliphilus denitrificans BC]
MRFLFPVLASLALAPAAFAQAAPVTTSSGLIYESLKEGSGTAPKATDTVRVHYRGTFADGKEFDSSYKRG
QATEFPLNRVIPCWTEGLQRMKPGGKARLTCPASIAYGERGAGGVIPPNATLHFEVELLPVR
>gi|319762877|ref|YP_004126814.1| regulatory protein luxr [Alicycliphilus denitrificans BC]
MLNSKEANGTSPSAPEGDPPPVSGQFAVLQNPPSMWPDFMTGQVEKPVRVLLVDDDAHMRRVIAQELMAD
QRTLLVAQAASVREGRKAIKQHEFDVMLVDLNLGDGEGFQLIDYMKSIRPAAEAVIISIMENDDQVLHAF
ELGATGYLVKNSWFGSYPQAVLQVANGGASITPHLARRLLQRFDRAAAPATHEQQQDERETERLSQREKE
VLRMVASGYTSAEIGTRLLISSLTVNTHIKNIYRKLQVRTRAQAVRFASLRGLF
>gi|319762878|ref|YP_004126815.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MPRITKKETMFRTRPPAYALACAALCLMQLVVNVLLVAYAGRFVPETALRWQIFSLAITFVLGVLILLQV
PRALQWRPRRSIRPSRELKIERQRIARDLHDQVGSQLVHAMALVDGGSPAMRPLLQALEHCLLDLRLLVD
SMDGDDDALSDRLARLRHRIQPVLDHRGIALDWNVMPAGEVPMPVGLPARELTAIVQEALSNVLQHASAT
AVSISLEPVRTAEGDAWRLRVADNGKGLATPEPTGHEAGHGIAGMRLRASRAGGVLELLPSAEQGLCVQV
TLPVRR
>gi|319762879|ref|YP_004126816.1| hypothetical protein Alide_2192 [Alicycliphilus denitrificans BC]
MQMRFLWLSGALLAAVLAGCAGSQRLVPKVEQGQAEGGAKTVTVASESVACSRPQCPVLAAAWTSAKAGQ
AVLTVGLPYQKAEVTGADFHFGGSQTVHVRSRSRADAPALGFPATAFDVPLGLIGQIAYAPRSWVRVHTA
DGRSVDETLNSGDQRGRAVEAMSYFLAAVESASGKAIDVEGNRGGLLERLGGGNK
>gi|319762880|ref|YP_004126817.1| redoxin domain protein [Alicycliphilus denitrificans BC]
MERMLQLGPLALPWTLLILLAAWQLGNLVHERLSARSGLAPGPHGWRLTLAALLAARLGFVLGYPAEYAA
APWSVPDIRDGGWQPWAGLGAALLYVAVLWLWRSPWRRPLASGLAMFVAAWLTGLALLRATAAPGAADLP
TWRGVALDAGSVAPADLRGQPVVVNLWASWCPPCRREMPVLLQARQAHGQVRFLWVNQGEPPETVARFAA
RQGLPAADVLLDTPAQLGRTLGYKALPTTLFYDGRGRLVAVRAGELSAATLAHHLAQITGPARPAP
>gi|319762881|ref|YP_004126818.1| 2',5' RNA ligase [Alicycliphilus denitrificans BC]
MQAPQQSPAGVEPAAPLLQHHLFFAVLPDAAAAHAAADLAQSLIARHDLQAQVRAQRLHATLLSLGWEAA
LSERHLAWARAAAARVRAPSFQLRFDRVLSFARAPRAKRPCVLCGPADGHPGFLHLYEALHAQLWSQVPG
LQGVPQAPRITPHMTLCYSRQAVPEQAVPPLAWTVDRFVLLHNVRGSSGPYEVLGEWPLGPTTLFET
>gi|319762882|ref|YP_004126819.1| hypothetical protein Alide_2195 [Alicycliphilus denitrificans BC]
MNTFTALLLAAALASPLAATAATAHDHGGGAETHQLQLNAGRKWGTDAPLRKAMTAIHGSVTQILPAAHA
GKATQADYDAFVNAINQQVAYMVENCKLPPEADAQLHIIVADLMAGAEAAQGKQGENKRAAGVVQVAKAS
NAYGRYFDHSGWKAVKLPH
>gi|319762883|ref|YP_004126820.1| hypothetical protein Alide_2196 [Alicycliphilus denitrificans BC]
MKYPAWTRALLAVSLALNLGVIAALVLRPALVAPPQGTAAPAVHLPDYLALTPEQRARWDGLEAPFLHDL
SANWGDIRRHREALVRHIFAATPDRTAIDAEQAAIAHLQAAQQQRVIAQLLAERALLHEEQRERLLQLLL
GRYAGEATEEELLHRK
>gi|319762884|ref|YP_004126821.1| transmembrane anti-sigma factor [Alicycliphilus denitrificans BC]
MTCPRTEDLSAFADQALPARRQAALRRHLLACPVCRQQLDALQALRRQLHALPSPTLGFDLAAQLQDRLP
RRAPRPRRAGWSLPGWMPTGLAAGAALVCGLWLGGLLLGTGASIPAASPAMARVFDPVPPGGLCAAAEIC
RLPRTLQ
>gi|319762885|ref|YP_004126822.1| RNA polymerase sigma factor, sigma-70 family [Alicycliphilus denitrificans BC]
MRPLSPLDETDRIARARRGEIAAFSELVAHYQDRIYRFLVRMTRSQEDARELTQETFLSAYEALPRWRPD
ARLSTWLFRIARNQAVDRLRRAQRVEFVALDEALHEQVPADTPTPEAALQARQRIAALERALARLPVEHR
EILLLRDIEDMPYEDIAEVLGISLGTVKSRIARARAGLLRHMPR
>gi|319762886|ref|YP_004126823.1| hypothetical protein Alide_2199 [Alicycliphilus denitrificans BC]
MSAIRLAAACAAALSAGLLAQSASAACYVVYGADKQLIYRSQTPPVDLSRPLHETVAQIAPGGTLVFSLD
NHGCELEINHLPSVGAPRSGAADAAPPARVPPAERR
>gi|319762887|ref|YP_004126824.1| RNA methyltransferase, trma family [Alicycliphilus denitrificans BC]
MSDPIATHLPPEPQHPLPPGWLEVTSMDMDAQGVARKSDGKVVFIDGALPTELVSANTHRKKNNWEQASL
TEIHRESSLRVRPGCPHFGLHAGACGGCKMQHLDAGAQVAMKQRVLEDNLWHLAKVKAETILRPIEGPAW
GYRYRARLSVRYVPKKGTVLVGFHERKSRYIADMQTCKILPPHVDAMLMPLRALIAGMQARDTCPQIELA
CGDAVTALVLRHLEPLSDADKDRLRAFAAEHGVQWWLQPKGPDTVHLLDEGGEQLAYGLPDFGITMPFKP
TDFTQVNPHINRVLVTRALRLLDAREDERVIDWFCGLGNFTLPIATRSREVLGVEGSEALVARSRENYQK
NQAQRQAGKALAATNFVARNLFEMTPEVLIADGAADKWLVDPPREGAFALSKALADIHQARLGAAEAPPL
PAGHERWQPPRRIVYVSCNPATLARDAGLLVHQAGYRCAAAGVVNMFPHTAHVESMAVFERAA
>gi|319762888|ref|YP_004126825.1| d-serine ammonia-lyase [Alicycliphilus denitrificans BC]
MRSSPPPSHEDPVAARLRRAEPCLWFNPRRRDTAARLPVAGTQIGLDEMEAAAARFARCAPLLAQVFPEL
RAAGGVIESPLLRAPGLHPAAGLAPGQGALWIKADHGLPVAGSVKARGGIHEVLELAERLALQHGLLTPQ
SGPGDYRALAGPAARAVFARHTVAVGSTGNLGLGIGVAASALGFRAVVHMSADAKEWKKERLRLRGVQVV
EHAGDYEGAVAAGRAQAAQDPFSHFVDDERSLSLLLGYSAAAPYLRRQLRDAGIAVDARHPLFVYLPCGV
GGAPAGITFGLRQVLGPHVHCFFAEPVQSPCFMVQMMAGQGAHPSVYDWCLTNKTEADGLAVPRASLPAA
ELMAPLLSGCFTVRDETLFRQLVQVLDATGERIEPSAAAGLGGPGLLAGTDGGRAWLAAQGLLPHLPRAT
HLVWTTGGLFVPPEAYARFVERGRAAG
>gi|319762889|ref|YP_004126826.1| uncharacterized protein family upf0029, impact, n-terminal protein [Alicycliphilus denitrificans BC]
MPYTLSAPVHSELVIKKSRFIGCVQPMADRAGAQAVVDGLWRQHPGAAHVCWALLAGGQSAAVDDGEPGG
TAGRPMLDVLRHQDLEGVLATVVRYFGGVKLGAGGLVRAYTDTVAQALLQAEKTPLQRMSTLRCSVPYAL
EGLLRREVEAAGAELLDVAHGSQVLLRLRLPQARAEAFMERMGDLGHGRVAWLAPE
>gi|319762890|ref|YP_004126827.1| azurin [Alicycliphilus denitrificans BC]
MHTLWKPLAMALVAGAGVHAAWAADCATEINGNDAMQYDKTSISVPASCKQFTVTLKHTGKLPKATMGHN
WVLAKTADMQGVVADGVAAGLGKNYVKDGDTRVLAHTKVVGGGESDAVTFATSALKAGGPYSYFCSFPGH
SVVMKGSLALAK
>gi|319762891|ref|YP_004126828.1| radical sam domain protein [Alicycliphilus denitrificans BC]
MNAPIDVSFFPRHAKPLTSYRPYWAKRFGPAPYLPMSRAEMERLGWDSCDVVLVTGDAYVDHPSFGMAVI
GRVLEAQGFRVGIIAQPDWHSADAFKALGKPNLFWGVTAGNMDSMINRYTADRKIRSDDAYTPGDVGGKR
PDRAAVVYSQRCREAYKDVPIVLGGIEGSLRRIAHYDYWSDKVRRSIVVDSKCDILLFGNAERALVEVAH
RIAQRQPVESITDVRGTAFVRRTSEPGWFEIDSTEVDEPGRVDELINPYMTTSEQAAAQGQACAQEDAPS
SIAASACQESAGGKKDLKPVQFIPNPALPARGRSGRALPPRGRTVIRLPGYEQVKADPVLYAHANRVLHL
ETNPGNARALVQAHGEGRAARDVWLNPPPIPLTTAEMDWIFGLPYARNPHPGYADEKGGFEGATKIPAWE
MIRASINIMRGCFGGCTFCSITEHEGRIIQSRSEDSILAEVEDIRDKVKGFTGTISDLGGPTANMYRLGC
RSPEIEAACRKPSCVFPGICQNLHTDHGPLINIYRRARRLPGIKKILIGSGLRYDLAVQSPEYVKELVQH
HVGGYLKIAPEHTEAGPLSKMMKPGIGNYDRFKQMFEQYTAEAGKKQYLIPYFIAAHPGTTDEDMLNLAL
WLKQNGFRADQVQAFYPSPMASATAMYHTGRNTLTRVRRQMRDAAEEQVDTVRGEKRRRLHKAFLRYHDP
NNWPLLREALKSMGRADLIGNGKHHLIPTFQPLVDGGYQSARRKNSTAPKGGAPGVGYAINKDGKAVALR
RRPQEQQEPQGDVRFRTAQPRPGQMLSQHTGLPPRKRR
>gi|319762892|ref|YP_004126829.1| aspartate transaminase [Alicycliphilus denitrificans BC]
MSLFSAVEMAPRDPILGLNEQFAADTNPAKVNLGVGVYFDDNGKLPLLQCVQAAEKAMMDKPTARGYLPI
DGIAAYDNAVKALVFGADSDVVKSGRVATVQAIGGTGGLKIGADFLKKVSPDAKVLISDPSWENHRAIFT
NAGFEVGSYRYYDAATRSVDFDGMLADLQAAAPGTIAVLHACCHNPTGYDITPAQWDKVIEVVKAKGLVA
FLDMAYQGFGHGIAEDGAVIGKFVAAGLNIFVSTSFSKSFSLYGERVGALSVVANDKDEAARVLSQLKIV
IRTNYSNPPTHGGAVVAAVLNDPALRALWEKELGEMRVRIKAMRQKLVDGLKAAGVKQDMGFITTQIGMF
SYSGLSKDQMVRLRSEFGVYGTDTGRMCVAALNSKNIDYVCQSIAKVI
>gi|319762893|ref|YP_004126830.1| excinuclease abc, b subunit [Alicycliphilus denitrificans BC]
MQPAATAAPAPAGQFVHFPDSPFELFQPYPPAGDQPEAIAKLVEGVRDGEVFQTLLGVTGSGKTFTMANV
IARLGRPAIVFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSAINEHIEQM
RLSCTKSLLERRDVVIVATVSAIYGIGNPESYHRMVMTLRAGDRMGQREVIAQLIRMQYQRNDQDFSRGK
FRVRGDTIDVFPAEHSELAVRIELFDDEVESLQLFDPLTGRVQQKIPRFTVYPSSHYVTPRDVVLGAVET
IKEELRERLEFFAREGKLVEAQRLEQRTRFDLEMLSEVGHCKGIENYTRHLSGAAPGEPPSTLTDYLPPD
ALMFLDESHQMIGQLNAMYNGDRSRKTTLVEYGFRLPSALDNRPLKFEEFEQRMRQVVFVSATPADYEKE
HSGQIVDQVVRPTGLVDPEVEVRPASTQVDDVLQEIRLRVEKNERVLITTLTKRMAEQLTDYLADNGVKV
RYLHSDVDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAA
RNVNGKAILYADRVTDSMKKAIGETERRRAKQIAHNEALGITPRSIVKQVRDLIDGVYSEKAGQEALRLE
QEAARHAELEEMSEKDIAREIKRLEKRMLEHARNLEFEQAARVRDELARLKDRVFGAHGGDHVPA
>gi|319762894|ref|YP_004126831.1| iron-sulfur cluster assembly transcription factor iscr [Alicycliphilus denitrificans BC]
MRLTTKGRFAVTAMIDLALRQNNGPVTLAAISQRQQISLSYLEQLFGKLRRHELVESTRGPGGGYTLARK
AGDITVADIIVSVDEPIDATQCGGKENCLGEAGRCMTHDLWATLNQRMVEFLDSVTLQKLVDDQLAKGVQ
IEDKPVTRRAISTTPVVKPIRVNAPNSVFALGNAFAKS
>gi|319762895|ref|YP_004126832.1| cysteine desulfurase iscs [Alicycliphilus denitrificans BC]
MDMTPHFPIYLDYGATTPVDGRVVDAMIPWLREHFGNPASRSHAWGWEAEEAVEKARGHVADLIGADPRE
IVWTSGATESNNLAIKGAAHFYKGKGKHLITVKTEHKAVLDVMRELERQGFEVTYLDVQENGLLDIEKFK
AALRPDTILASVMFVNNEIGVVQDIPAIGALCREKGVIFHVDAAQATGKVEIDLGRLPVDLMSLASHKTY
GPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPTHQIVGMGEAFRLARLEMVQDLAKVRALHERLL
NGLKDIEQVFINGDLRQRVPHNLNISFNYVEGESLIMGIKGLAVSSGSACTSASLEPSYVLRALGRSDEL
AHSSLRMTIGRFTTEEEIDYAISTIRHNVAKLRELSPLWEMYQDGVDLSTIQWAAH
>gi|319762896|ref|YP_004126833.1| fes cluster assembly scaffold iscu [Alicycliphilus denitrificans BC]
MAYSDKVIDHYENPRNVGSFDKGDDTVGTGMVGAPACGDVMKLQIKVNPETGVIEDARFKTYGCGSAIAS
SSLVTEWVKGKTLDEAAALKNSQIAEELALPPVKIHCSILAEDAIKAAVNDYKAKHEAAVEAA
>gi|319762897|ref|YP_004126834.1| iron-sulfur cluster assembly protein isca [Alicycliphilus denitrificans BC]
MAITLTEAAARHVTRYLARRGKGLGVRLGVKTTGCSGLAYKLEYVDEQAPEDIVFENHGVKVLIDPKSLA
YIDGTELDFVREGLNEGFRFINPNERDRCGCGESFRV
>gi|319762898|ref|YP_004126835.1| co-chaperone hsc20 [Alicycliphilus denitrificans BC]
MNLQSDDFELFGVPRSFAQERATLDARWKDLQREAHPDRFAAQGAAAQRVAMQWSVRINEAYQRLKDPLR
RAAYLCELHGAPIRAEDNTAMPAAFLMQQMQWREALEEAASMAELDALDDETQAARGAAIARCGELIDAR
QDYAGAAREVRALMFIARFAQDIDSRREQLGQ
>gi|319762899|ref|YP_004126836.1| fe-s protein assembly chaperone hsca [Alicycliphilus denitrificans BC]
MALLQISEPGQSPDPHQRRIAIGIDLGTTHSLVAAMKSGVAECLPDAQGRVLLPSVVRYLAGGARHIGHE
AAAAQTLDPSNTVASVKRFMGRGLADIAGHEALPYDFVSSQDAGGMLRLSTAAGMKSPVEVSAEILATLR
FRAEDSFDSDIYGAVITVPAYFDDAQRQATKDAARLAGLNLLRLINEPTAAAIAYGLDNAAEGVYAVYDL
GGGTFDISVLRLTKGVFEVIATGGDSALGGDDYDAFLADWVLQRLGLRARTPEDKAAVRLAARACKEALT
ATETAAFSADVAGQRVHFDVKRSDFDAVTAALTQRSLAAVRRALRDAQIGRDDVQGVVLVGGSTRMPQVR
EAVAGFFGREPLTNLNPDEVVAIGAAIQANQLAGNDAAGDLLLLDVIPLSLGLETMGGLVERIVNRNETI
PTAKAQDFTTYKDGQTALALHVVQGERDLVQDCRSLARFELRGIPPMAAGAARIRVTFTVDADGLLSVSA
REQTSGVEARIDVKPSYGLSDEQIARMLQDGFATAQQDMRARALVEARVDADRLLVATQSALDADGDMLA
PDEREAIDALMQALRTALEAGRDAAAIEAATSALAKGTEAFAARRMNRGIREALAGRNVDTL
>gi|319762900|ref|YP_004126837.1| ferredoxin, 2fe-2S type, isc system [Alicycliphilus denitrificans BC]
MPVIRILPHHEYCPEGAEITAPAGTSICEALLDNNIKIEHACDMSCACTTCHVIVRQGYESLNDAEEEEE
DLLDRAWGLEPQSRLSCQAILAQSDVTVEIPKYSINHAKENH
>gi|319762901|ref|YP_004126838.1| DNA polymerase iii, epsilon subunit [Alicycliphilus denitrificans BC]
MPRQIVLDTETTGLSAENGDRIIELGCVELLSRKLTGNNLHLYLNPERDSHEDALKVHGISNEFLRDKPK
FAEVVHDILEYLRGAELIIHNASFDVGFLDKELELAGLPPLAAHVDGVIDTLAMAKEMFPGKRNSLDALC
DRLEVDNSGRTLHGALLDAELLADVYINMTRGQDALLIMDETANGEGGVKVAAVDLSRLVLPVLLASDQE
LAEHEDLLAQIDKSSAGKTIWRTRAEAQKAMP
>gi|319762902|ref|YP_004126839.1| fad dependent oxidoreductase [Alicycliphilus denitrificans BC]
MSDRVDCVVVGAGVVGLAVARALALAGREVMVLEAANAIGTETSSRNSEVIHAGIYYPQGSLKARLCVQG
KAMLYDYCAQRGLPHRRCGKLIVATSPQQQAQLDGIRQRAAANGVDDLQWLTRDEARALEPELECVAALL
SPSTGIVDSHALMLALLGDLENAGGLLALNSPLERAQCSPDAIHLEARDGTRISARTVVNAAGLHAPDLA
RRFAGLDPAHVPRAAYAKGNYFTLSGRAPFSRLIYPVPEAAGLGVHLTLDLGGQAKFGPDVQWVDGPDDL
VVDAGRAQGFYAEVRKYWPGLRDGALAAGYAGIRPKIHEPQEPAADFVIQGPRQHGVAGLVNLFGIESPG
LTSALAIGAYVSDMFSDRSA
>gi|319762903|ref|YP_004126840.1| hypothetical protein Alide_2216 [Alicycliphilus denitrificans BC]
MTSVSETISTTQGELEKLVGDLRGLLANRDLDGIPEIKQLRQRLDDGVQTVRDAAVRAAQQAADQAKDAA
RAADRYAHDEPWRVASAALAVGALVGFLLARR
>gi|319762904|ref|YP_004126841.1| hypothetical protein Alide_2217 [Alicycliphilus denitrificans BC]
MGRMNWISLLNLQGLAARWRTAISEGATAVEDRMELARLEWAEHRRRMALLALLLVVFGTLAVVALLLLS
AAVLVQFWDTPQRALVAWILAGVWCAACGGVLVALVSLARRSRNAFALTRRELAQDWHVIKEQL
>gi|319762905|ref|YP_004126842.1| hypothetical protein Alide_2218 [Alicycliphilus denitrificans BC]
MPMSPRQPTPEQQQVLDRILAQRERLRARRDAMRQARAAAAPQGRVNPGDPLIARFVSFARLHPLAVAAV
LGVAALAGPGRVVRWAGVVLPAILRMRRG
>gi|319762906|ref|YP_004126843.1| dihydroorotate dehydrogenase [Alicycliphilus denitrificans BC]
MSLLPYAFARPFLFGMDAEAAHELTMDMLARGQRTPLQWAWCNETVSDPVQLAGLTFPNRVGLAAGLDKN
ARCIDALAAMGFGFVEVGTVTPKAQPGNPKPRMFRLPEARALINRLGFNNEGLDAFIANVRRSQVRAQGK
PLLLGLNIGKNAATPIEQATGDYLACLEGVYPHADYVTVNISSPNTQNLRALQSDEALDALLGAIADHRE
KLAAAQGRRVPIFVKIAPDLNEAQVAVIAATLTRHGMDGVVATNTTIARDAVQGLPHAGEAGGLSGAPVR
EASNAVIRQLRAALGPAFPIVGVGGVMSAEDAVGKIRAGADVVQIYTGLIYEGPALVSRAARAIRAMR
>gi|319762907|ref|YP_004126844.1| ribose 5-phosphate isomerase [Alicycliphilus denitrificans BC]
MTAPTSLSQDELKTLVGRAALDYVVPGEIVGVGTGSTVNKFIDALATVKERIGGAVSSSEASTARLKALG
IPVLDANEVASLSVYIDGADEIDGRGYMVKGGGAALTREKIVAALAQRFVCIADESKLVSVLGAFPLPVE
VIPMAASQIARRFESLGGQATLRLRDGRPLVTDNGQHILDVRGLAIGDPLAFESEVNQWPGVVTVGVFAR
QKAHVCLLGTAQGVRTLKF
>gi|319762908|ref|YP_004126845.1| glutaredoxin [Alicycliphilus denitrificans BC]
MTFIRHAAAAAACTLLALAAQAQQVYRIVGPDGRVTFSDRPPAAGAEAAPVGAGAQGSGGSEALPYQLRQ
IAARFPVTLYTGSDCAPCDSARNLLVSRGVPFTERTVGSNEDIEALRRLSGESSLPFGTIGGQQLKGFSD
SEWSQYLDAAGYPRQSQLPPGYRRPPATPLVAVQARPAVPEAESAPAAPAARPAAPATPPTGRTPANPAG
IVF
>gi|319762909|ref|YP_004126846.1| oligopeptidase a [Alicycliphilus denitrificans BC]
MNNPLLDFSGHIPFDRITPADVAPAVDRLLERANAALETVTQPDFPARWDSIARVLDVATEELGRSFGAV
SHLSSVADTPELRAAYNAALPRVTEFWTRLGADERLYAKYKAIDPATLNAEQRQALGNAMRNFRLSGAEL
QGAAKQRFAAIQERQAELQQKFSENVLDATDAFAYYASADELEGVPADVVQAARAAAEGEGKEGYKLTLK
MPCYLPVMQFARSSALRETLYHAYVTRASDQAAGDAVRFDNSAVMAEILALRQEEARLLGYDNFGQVSLV
PKMAHTPEQVTHFLRDLARRARPFAEKDVADLRAFAAEQLNLPDPQPWDWPYVSEKLKEARYAFSEQEVK
QYFPAPKVLAGLFKIVETLFEVAIRPDQAPVWNPAVEFYRIERGGQLVGQFYLDQPARNAKRGGAWMDDA
RTRWLRPDTGQLQTPVAHLVCNFAEGVQGRPPLLTHDDVITLFHEFGHGLHHMLTQVNERDVSGISGVEW
DAVELPSQFMENFCWEWEVLRHMTAHVETGEPLPRALYDKMIAAKNFQAGMQTLRQIEFALFDMLLHTGH
DPKDDPLPLLESVRDEVAVLRPPAFSRTPHSFSHIFAGGYAAGYYSYKWAEVLSADAYAAFEETAGEDGM
PDIGTGRRYRQSILEAGGSRPAMESFKAFRGREPTLDALLRHQGMAS
>gi|319762910|ref|YP_004126847.1| methylenetetrahydrofolate dehydrogenase (nadp(+)) [Alicycliphilus denitrificans BC]
MTAQLIDGNALSRQLRAQVAQRTQALKARGITPGLAVVLVGDNPASQVYVRNKVKACEDVGFHSVLEKYD
ASMTEAELLARVEALNNDPAIHGILVQLPLPKHIDDHKVIEAISPLKDVDGFHVASAGALMVGEVGFKAC
TPYGCMKMLESIGMKDLRGKHAVVIGRSNIVGKPMAMMLLAANATVTICHSGTADLAAMTRQADIVVAAV
GKRGVLTADMVKPGAVVIDVGMNRNDEGKLCGDVDFDGVKEVAGYITPVPGGVGPMTITMLLVNTLEAAE
RL
>gi|319762911|ref|YP_004126848.1| response regulator receiver [Alicycliphilus denitrificans BC]
MSLIPKKGTVYVVDDDEAVRDSLQWLLEGKDYRVRCFDSAESFLTRYDPREVACLIVDIRMGGMTGLELQ
DRLVERKSPLPIVFITGHGDVPMAVNTMKKGALDFIQKPFDEEELLGLVERMLDRAREAFAGHQQAASRD
ALLSKLTGREAQVLERIVAGRLNKQIADDLGISIKTVEAHRANIMEKLNANTVADLLKIALGQQAAKA
>gi|319762912|ref|YP_004126849.1| pas sensor protein [Alicycliphilus denitrificans BC]
MDPAETSAPPAASAVKAPARWWRSWWRSLSPGRQDRFAALAPLASVLMFMAAIAVSFWYLRTEEIEREKE
ALKRDVEYAQQRVRLRLLERQEQVMRIARDLSNGDLTRSDFVGRAEALISQYPELQAITWIDERRRIRAS
HAAPTVTSNQLRVSGEVLKTGEAADLFRLARDMQQPVYSQPEAGSDDAAPLLQLQVPLSPQGKFGGVVLA
EYSIDSLLRYATPTEVLARYAVTLIDGQGRTLAGTPLAPRHNALLPWTTRANEYEIPVSPVGNGLVLRAQ
AYRTSLGMVGSGLFWLVGTLSAMTTWMLIATWRHTRRRMQAQQALVAETNFRRAMENSILTGMRALDLEG
RITYVNAAFCQMTGWTQEELIGQTPPYSYWPEAEYEKLHANLREELSGKTVPGGFQVRVRRKSGTLFDAR
LYVSPLIDARGQQTGWMTSMTDITEPNRVREQLTASHERFTIVLEALDASVSVAPLGSQELLFANRLYRQ
WFGSQTSGHLEMVAQAGVLPAHGGGVDGHEDDSLMGLLASDPLAHAHSENAEIYRPDLGKWLEVRSRYLN
WVDGRLAQMVIATDITPRRQAEELAARQAERAESVSRLITMGEMASSVAHELNQPLTAISNYCSGMVSRI
QGGQLSEEALLAALKKTAHQAQRAGQIIQRIRAFVKKSEPNRTLADVHEMVSEALELASIELRRHNVRLT
HYVAARLPQVMADTILIEQVLINLMKNGAESIAQAQRPPALRSVELRVVPRQVDGCDVIEFSVQDTGRGL
APEVLAHLFEAFFSTKSEGMGIGLNLCRSIVESHHGRMHAENLYNADEVTGCRFSFWLPLANTAETTINS
AATSTPGTIA
>gi|319762913|ref|YP_004126850.1| 2-oxo-acid dehydrogenase e1 subunit, homodimeric type [Alicycliphilus denitrificans BC]
MSDPTKGLGASDIDQQETREWLEALSAVIEKEGPERAHFLLEQLLEQARQSSIDLPFSANTGYVNTIEPD
QEARCPGNIAIEKRLRAYMRWNAMAMVVRANRLHPHDGGDLGGHIGSFASLASMWGAGFNHFWHAESEGH
GGDCIYFQGHSAPGIYARAYLEGRITEEQLENFRQEVGGKGLSSYPHPKLMPGFWQFPTVSMGLGPMMAI
YQARFLKYLHARGIAKTDNRKVWVFLGDGEMDEPESKGAISLAARENLDNLIFVINCNLQRLDGPVRGNG
KIIQELEGDFRGAGWHVIKLLWGKGWDELLARDKSGKLKQVMMETLDGDYQTYRAMDGAYIRKHFFGKYP
ETLKLVEHLSDDEIWELRRGGHEPEKVYAAFHAANAHQGQPTVLLVKTVKGYGMGKAGEAKNTVHQTKKL
DDEDIRYIRDRFNIPIPDSELDKLPYYKPADDTPEMKYLHERRQALGGYLPHRRTHADESFTVPALDTFK
AILEPTAEGREISTTQAYVRFLTQLLRDKALGPRVVPILVDEARTFGMEGLFRQIGIYNPLGQRYTPVDR
DQVMYYKEDVAGQILQEGINEAGGMCSWIAAATSYSTNNRIMIPFFVYYSMFGFQRFGDFAWAAGDMQAR
GFILGGTSGRTTLNGEGLQHEDGHSHILSSTIPNCVSYDPTFAHEVGVIMQHGLKRMVEKQENVFYYITL
LNENYPMPGLAAGTEEQILKGMYLCKAGAQGELRVQLLGSGSILRESLEAQKLLATDWGVQADVWSCTSF
TELAREGQDTARWNLLHPLEAPRPSFVSQQLADHGGPVVASTDYMKAFAEQIRAFIPAGRSYTVLGTDGF
GRSDFRYRLREHFEVNRHYIAVAALKSLADEGRLPAAKVAEAIAKYGIDADKINPLHA
>gi|319762914|ref|YP_004126851.1| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Alicycliphilus denitrificans BC]
MALIQIQVPDIGDFDEVGVIELLVKPGDQVAAEQSLITVESDKASMEIPSSHAGVVKALTVKLGDKVKQG
SVIAELETADAAASEPKPAPAPASQAPAAAESIAPAAAPAAPAAGGRIEVRVPDIGDFKDVAVIELLVKP
GDNIRVEQSLFTVESDKASMEIPSPAAGVLKELKVQLGDKVNIGDLVAVLEGAAPAAPAAPAPAPAPAAA
PAAPVAAAAAAPAPAQSAPAHDPTAAPSGRLPHASPSVRKFARELGVPLAELKGTGPKGRITAEDVQSFT
RAVMSGAVQTQAQAAKAPAGGGSGVGMDLLPWPKVDFSKFGVIERKDLSRIKKISGANLHRNWVMIPHVT
NNDEADITELEAFRVSTNKENEKSGVKVTMLAFVIKAVVAALKKFPEFNTSLDGDTLVYKSYYHIGFAAD
TPNGLVVPVLKDADKKGILQISQEMSELAKKARDGKLGAADMQGGCMSISSLGGIGGTHFTPIINAPEVA
ILGLSKGQMKPVWDGKQFVPRLTLPLSLSYDHRVIDGAAAARFNAYLGQVLADYRRILL
>gi|319762915|ref|YP_004126852.1| dihydrolipoamide dehydrogenase [Alicycliphilus denitrificans BC]
MAVIDIKVPDIGDFAEVGVIEVLVQVGDTIKAEQSLVTVESDKASMEIPSSHAGVVKELKVKLGDKVAEG
SVLLTLEVAEGAAAPAAAPVQEKPAPAPASQAPAAPVAIASSFGGTADVECDVLVLGGGPGGYSAAFRAA
DLGLKVVIVERYATLGGVCLNVGCIPSKALLHVAAVMDEVSHLKSAGIDFGAPQVNVDSLRGHKEKVIGK
LTGGLAAMAKMRKVTVVRGYGSFVGANHVEVEETTGGGQDKTGGKKVVAFQRAIIAAGSQAVRLPFMPDD
PRVVDSTGALALAGVPKRMLILGGGIIGLEMGTVYSTLGARLDVVEMLDGLMQGADRDLVKVWQKMNAHR
FDNIMLKTKTVGAEATPEGIKVTFAPAEEGGTAPEPQTYDLVLQAVGRTPNGRKIGAEKAGVAVTDRGFI
NVDIQMRTNVPHIFAIGDIVGQPMLAHKAVHEAHVAAEVIAGELQGDKALASAAFNARVIPSVAYTDPEV
AWVGLTEDQAKAQGIKVKKGLFPWTASGRAIANGRDEGYTKLLFDDSPEAHGHGRILGGGIVGTHAGDMI
GEIALAIEMGADAVDIGKTIHPHPTLGESIGMAAEIAHGSCTDVPPQRK
>gi|319762916|ref|YP_004126853.1| hypothetical protein Alide_2229 [Alicycliphilus denitrificans BC]
MKSNLALILLAGLPALCNAQQVPAIPGGLPRDPGPSAQRPDIPRNPGSDQEALMQQRLLINSQTDAIKEL
AQQLKLLEQRVKKLEDKGASNGH
>gi|319762917|ref|YP_004126854.1| hypothetical protein Alide_2230 [Alicycliphilus denitrificans BC]
MAIEDALAAMDKAQNAFNQTVASASGSSVQPWSESLVKYLSISVLGFMMISLILCTTLLWRRNAEASEIL
RIFGILSIVGLSALLLITGFSNEQLTPIVGLFGAIAGYLLGKDAKPSGSGSTKV
>gi|319762918|ref|YP_004126855.1| hypothetical protein Alide_2231 [Alicycliphilus denitrificans BC]
MFKKIAVAMTAALAFSGAAFAAWPERPVTLVVPFPPGQATDIFARALAERLGPRLGQAIVVENKAGAGSN
IGSEQVVRAKPDGYTLLVAGSAMAVNQTLYRKVNFDPRKDLQGITLVAKVPLVFLAHPGSGIKSMRDLVA
RARAEPGKLSYASAGIGGTQHLSAEMVKARAKIEIEHIPYKGSGPAQADFIGGQVPLMVDSVTAGLANIQ
AGKAVPLGVTSSTRSSQLPDVPTIAESGLPEFKGFEAVGWLGLMAPKGTPQAIIDTLNREAVGILRSAEM
QKFIRDRGSEPTPTTPQEMDQFVASEIAEWGKAVKQSGASVD
>gi|319762919|ref|YP_004126856.1| filamentation induced by camp protein fic [Alicycliphilus denitrificans BC]
MSPPADTANPPASPHLLLRALRGAGPQGASVAQLLAQLPGVPRRTAQRWLAQCVEAGQARAIGAGRGRRY
VAVRAMPPPAAVHQVRESAESSWSTDGLPSGLALSPEGREVWAYVSQPLTARAPVGYQRDWIDGYVPGRI
FYLPEPVRRQLHAMGRTPDEQAPAGTYSRAVLDRLLIDLSWASSHLEGNTYSRLDTRELIRHGTAAEGKA
RIETQMILNHKAAIELLVDASAQPGPPFSRYLLMNLHATLAENLLPNPADEGRVRQHAVDIGQSVFRPLD
APQVLDELVDVLIAKANAIADPFEQAFFMMVHLPYLQPFADINKRTSRLAANLPLFRANLCPLTFVDVPP
ELYARAMLGVCEMGRVELLRDLLVWAYERSTQEYVAIRQTLAEPDPLRLAWRQLIKDTVHAVVTRPGADA
VGLVKQAVAAHVPGPERAAVQALILDELRRLHEGVLARYRLRPGQWRDWIAAQGCY
>gi|319762920|ref|YP_004126857.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MKRTRLPSTATLAAFECAARHLNFRRAADELHLTQGAVSQQVRLLEAQLGVALFARVRQRVLLTSAGERY
LREVRRILRELGEVTHQAMASGDKELLNLAAVPTFAVKWLVPRLPGFFAAHGHVSLNLVSRSAPFNFDAE
PFDAAIHYGEPSWPGAVCTPLFEEDMRPVCSAHYRRLLDLRTPADLARATLLQQFTRPSAWQDWFAHVQA
EPANAFQGPRFDSFNMILEAVQVHMGAALLPRFLVAGGIARGELVELSPRGLPSTRGYHLVCPEARQDAP
AVAALRGWLLDEVAASLAG
>gi|319762921|ref|YP_004126858.1| dimethylmenaquinone methyltransferase [Alicycliphilus denitrificans BC]
MSSPHPTDRRWKKPLTPFIFHRDFERPDAGDVATLAGADVTRVSDLAGRMYTCHPSVHSLTATAMPMCGP
AFTVKCPPGDNLGVMAAVRAVGWGDVLVVDGQGFTEWCMGGFELLRYARDARGMAGLLVHGAWRDVQEAQ
AQGLPVYGLAVSPFSGPKLGPAEVNVPVSCGGVVIAPGDVVCASAEGVAVVPRASVAAVARALRAGPGGH
GIEDFLQEMDGHVAGWLQDGRGA
>gi|319762922|ref|YP_004126859.1| mmge/prpd family protein [Alicycliphilus denitrificans BC]
MSGSGLTRALAAFVAGLRTEHVPPAARQEACRAMADCLGGAVAGARDEVARIAAATQARPGGACILWGTG
LRADVHDAALVNGCAAHAHALDDTHESMRGHPSAPLVPAILAVGELVDAGGDDLATAYIAGAEVACRLGR
SVNDRHSQLGWHTTGTLGPVGAAAACAWLLRLDAGRTAHALGIAASMAGGLRVNFGTMAKALHAGMAAQH
GVQAARLAAGGMTASTAALEGHEGFLQLFCDDGSQDAARALRGLGRHFEVLTPGIVYKQYPTCSLMHALI
DMVLQARAQGLLTPADGLELRCAISQRLEAVRGKDWPATGLAAKFCVEYCVAVAVQEGSQGIADFTDAAI
HRPGLRELAQRVRLSQGQDFPPGNGDCAELVVLRDGREVLRRRQAKPCGHPSMPLSPAQHEAKFMACAAP
VLGTAKARRLLQALHSPQPCSARELARALALPCA
>gi|319762923|ref|YP_004126860.1| hypothetical protein Alide_2236 [Alicycliphilus denitrificans BC]
MFSAMPSISRRRLLLAAAAAPLAAHAGLAQAQGKETSIIVGYPPGGSLDAMARVLAQRLGALRGQPVIVD
NKPGFSGNIGAQFVAKSRPDGSTLLMTALTTYAINQKLMGPSMGYDLLKDFQHVAIVGYLPNVLIVPTVL
GVNTLQDFIKAAKARPGGLSIATTGNGSLEHIAGEMFKRATGTDMLAVPYKGSTPGVTDLIGGQIQAMFV
NTTTAINNLKTGRIKALAIAGPSRVAALPGVPTLAEQGVKMSNDVVSIFGIAAPAATPAPMVEKLNADLN
AVLREPEVNARFSGLGVEVVTESADHARERIAREVATWDKVIRETGIAL
>gi|319762924|ref|YP_004126861.1| hypothetical protein Alide_2237 [Alicycliphilus denitrificans BC]
MQALLDAIAAMPPPGDARRIFHGRGGLHPGCEQWTLDAYPPVFVLTSFAPVDEGQLAAVGDALRARWAQL
APGELLHWVFQHRGEALRLQGRSDTRLMAGGVPDPHVVTEGGLRFRVHVLSGQNHGLFLDMAEGRRWVRE
WATDFKAREGRGARVLNLFAYTCAFSVAALAGGAAQVVNVDMGRGAIATGQQNHRLNGLDGASFLAHDIF
ASWGRIARGGPYDLVIADPPSYQKGSFVAAKDYARVVRRLPGLLAPGGHALLCLNAPELGEGFVRGLVDD
LAPPLAFAGRVPNPAAFADVDGGRALKVLVFRA
>gi|319762925|ref|YP_004126862.1| 6-phosphogluconate dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MNTPRIGLVGVGLMGHGIALNIARKGHALTVLEHPGNQPLDELRALGVASAATVQDLARQVQVLILCVTG
SPQVEAVLLGEQGALATLQPGTVVIDCSTAIPASTESVARAVTAAGGRFLDAPMTRTPREAAEGRLNLLV
GGDAQLLQECLPLLQCFAENITHTGAVGSGHRMKLLHNYVSLGSVALIAEAAACALAAQVSPQVFVDVLA
KGGGGGVALERLRPYLLQQDPSGLRFFMSNALKDMGYYTTMAQDGAAAHGIAQAVHDTFASAVAEGGPQR
LVPELVAILGKNTL
>gi|319762926|ref|YP_004126863.1| hypothetical protein Alide_2240 [Alicycliphilus denitrificans BC]
MGGDPARLPRREDGGPIQLKTRATPAAYGGGAGAAPCAPPPPGGARTGSAAMTMVDPVSLANEPLLAAIA
WSYLAINSTRIVTYVPQIVAGRLALHRRRASDLAADLGLLGGFALQRPGLRHAGAARRVLRRDHDDQPAG
LLQRHRHRGRAPLAPAPPPASCADGPGRVQHAAPSARLDGHGTPARDGPRGRSGSGAVAAGALGARPRQG
HDRAADGPAVDGRPAPARCAPTRPWACPTPARGAALGPDPAPALSG
>gi|319762927|ref|YP_004126864.1| hypothetical protein Alide_2241 [Alicycliphilus denitrificans BC]
MTLPERPARYWLMKSEPDECSIDDALAAPGATVPWTGVRNYQARNFMRDEMRIGDGVLFYHSGCPEPGIA
GIARVASGVRADPTQFDPASPYYDPKATPGKPRWLLLDVQAIRKTRLVRLAELRAHPALAEMRVLQRGNR
LSITPVQEQEWAAILRDCLGGKTAGQSN
>gi|319762928|ref|YP_004126865.1| transglycosylase-associated protein [Alicycliphilus denitrificans BC]
MMSFLGIVLIGLVVGLLARAIKPGDDKLGWLTTILLGIAGSFVATYVGVAMHWYQQGETAGWIASVVGAI
VLLVLYDLLRRKP
>gi|319762929|ref|YP_004126866.1| nlp/p60 protein [Alicycliphilus denitrificans BC]
MFRRFFFLLLFCANAYAAPADEMERMLAERGLIVQLQEMRHSVADRTSDLISTAMGFIGVPYRRGGSSAE
TGFDCSGFVRTIFEQAKGMVLPRRANEQAAATEVIDKKDLQPGDLVFFNTMRRAFSHVGIYVGDGKFIHA
PRSGAKVRVEDMGASYWQRRFNGARRVTQDDVDTAAAITASVPR
>gi|319762930|ref|YP_004126867.1| amino acid permease-associated region protein [Alicycliphilus denitrificans BC]
MNHEPPPSGQDQHGHDGLQRSLTHRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIVFVYAIIGTMLFFVM
RAMGELLLSNLRYKSFIDFASDLLGPWAGFFTGWTYWFCWIVTGIADVIAISSYAQFWLPGLPQWAPALM
CVGLLLGLNLLTVKLFGEIEFWFAMIKIVAIVALVGTGLAMVAGGFVSPAGRAASLANLWNDGGMFPHGA
MGFFAGFQIAVFAFVGIELVGTTAAEAEDPERTLPRAINSIPVRIIVFYVCALIAIMAVTPWRDVVPGKS
PFVELFVLAGLPAAAGVVNFVVLTSAASSANGGVFSTSRMLYGLALKGDAPRAFHRLSRAGVPARGLLFS
CSCLLAGAFLMWVVPDLVQAFTLVTTVSAILFMFVWSLILLSYIAYRRRRPGLHVASRYRMPGGVAMCWA
CLAFFAAILVLLCLESDTRQALAVTPLWFVLLGLAYRAMLRRLGGAAGTVPAQT
>gi|319762931|ref|YP_004126868.1| hypothetical protein Alide_2245 [Alicycliphilus denitrificans BC]
MPFFALTGGSAPARPANGPVAHSDAFNSCTPRNP
>gi|319762932|ref|YP_004126869.1| drug resistance transporter, emrb/qaca subfamily [Alicycliphilus denitrificans BC]
MMPAPVASASRPALLWLVALGFFMQTLDATIVNTALPAMARDLNESPLQMHSVIVAYSLAMAVLIPASGW
LADRFGTRRVFMSAIALFVAGSVLCALAPTLAMLSLARVVQGLGGALLLPVGRLAVLRAFPREEFISAMS
LVAIPGLVGPLIGPTLGGWIVEYASWHWIFWVNVPVGLVGLVAARRFMAGGEAQSSREFDAVGYGLLAFG
MAAVSLAVEGMAGGGVRGASALVMMVFGLASLAAYWLHALRSPNPLFVPGLFEVRTLRVGLLGNLFSRLG
SSCMPFMIPLVLQVSLGYTPMQAGMMMLPTVLGSMAAKPLVTHIVRRWGYREVLVTNTCALALLIASFSL
LSPSPPFALLLVQLALFGAVNSMQFSAMNTVTLKDLEGQDASSGNSLLSMVQMLALGMGVAAAGAVLASF
EGYFGQAQHALNAFRATFACMGLLTLAATALFLQLPAHEPPRAHPPVPEEQV
>gi|319762933|ref|YP_004126870.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MSFFTAVRFSPRLWLPGMAVALAGCVASYALWRQQQTSMDAIAHLRFEQETRLFAGALQRRMESHTDLLQ
GMRGLLTVDPQLRRAEFERVASELALERSHPGVKNINFTRYVPGAQRTAFEAQARGDAHMDGSLPRDFAI
HPEQERPEYFVVDFLWPREGNADVQGLEIHSQPDNLEAMMRTRAGGELVASAPFDLHQETERRTGIIIRI
PVFAHGTPPGQREAARFLGAVGVSIRIDDVIQMLRAEGYLKGLTLVMSDIGPSGAETGSAALLFDSTSKP
AQAADMERVQEVQVGGRRWRLQFQSAGTFLSAQEARLPGLLGLGGMLITALLTAMVSMLVLRRVRALGDV
QQAGVALRESEERFRAVFSQAAVGMAQVDLHSDRMVRVNRKLCDLLGYTEAELQQLRFQDISDPRDLDAD
LAFMERMRSGKISEFRMEKRYCRKDGEIVWAELMVSRLCLEGRPESHLAVVQDIGERKQMEQALSDSEQH
LLGILNHMPVGVNLVRGRAIAFRNDRHVQICGYGEQEAPDVDSWWRLVMPDAAERHQAREAWKAACMAAR
HAADGAIRPVECHITSKAGLLRTVEISGVMLEDSHIVTMVDQSQRRQAEEEVRYLAYNDPLTGLPNRRLL
LDRLQQALAMSARHQLCGAVLMLDLDNFKHINETQGHDMGDRLLHAVALRLRACIPEDDTLARHGGDEFV
VVLKDLGASPQEAATRAEAMGLQILDAMREPFALGGGEPRHTTLSVGIVIFQGLHESADELLKRSDMAMY
EAKAAGRDALRFFDPQVQAQMTARVALEADMRSGLEAGEFELFYQPKMVHGRITGAEALLRWKHPVKGYI
PPSEFIPLAEQSGLILRMGQWVLRTACERLALWSSHPVLGQLSVAVNVSPRQFHEAGFVPEVLEALAGTG
ADARRLRLELTEGLLLQDVEDTVAKMVQLRGYGVGFSLDDFGTGYSSLAYLKRLPLHELKIDQSFVRDVL
TDPNDAAIARTIVALGTSLGLQVVAEGVETEAQRVFLERSGCHAWQGYLLSRPLPGLAFEDLVLEHAASA
SASAGATA
>gi|319762934|ref|YP_004126871.1| hypothetical protein Alide_2248 [Alicycliphilus denitrificans BC]
MQALATLGLFLATALAEIVGCYLPWLWLRQGRSAWLLLPAAASLALFAWLLTLHPAAAGRVYAAYGGVYV
AVALLWLWAVDGIRPGPWDWLGVAVTLCGMAIIAFAPRS
>gi|319762935|ref|YP_004126872.1| hypothetical protein Alide_2249 [Alicycliphilus denitrificans BC]
MKLKKTLQAIALCCGLAGVGSVNASVMLFDDAGDVSSILYSATYQGATLSATVQFTLNSLTATQAVFGVQ
ISNDSTGPGNNRLTSFGIDIVSPTLISAVSNGGWGASRNVNFPSFNSVDLCLWDGNNCSGGGNQGVGEGM
TESFTLTLGTSGNFLTNGLEFTSPYSVKFQSVGSGGGSLEFAGCIVGTAGCGSQVPEPASLALVGLGLLG
AGLARRRKA
>gi|319762936|ref|YP_004126873.1| chromosome segregation protein smc [Alicycliphilus denitrificans BC]
MRLNSIKLAGFKSFAEPTNFQLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESMQDVIFNGTT
SRKPASRASVELIFDNADHRAGGQWNQFTEIAVKRVLTRDGTSSYYINNQPVRRRDVQDVFLGTGLGPRA
YAIIGQGTISRIIESRPEELRLFLEEAAGVSKYKERRRETENRLADTRENLTRVEDILRELNANLEKLEK
QAEVAAKYNALQQDVTLKQHQLWYLKRADAEAEQARVRTEGLQAVNDLESRMADLRSVEADLEAIRQAHY
EAGDQVNQAQGKLYEATAEVGKLEAEIRYVVEGRQRVEQRLVQLAAQIQDWSARKEEAEAELETLEGAGM
DAEEQAELLAAQVEEQAAQIPELEDALRQSQQRSEEQRAAVVQIQQQIQVLAAEQRSLDEQSRQLDARFE
RLRADRSALAAPDEARLAQMRQQLDEAQEAAEMAEARLAELQDSVPQLDEERRARQQAVNQETARQADLS
ARLEALKALQDKVKVSAKLQPWLARHGLDGLQGLWSRIHIEPGWENALEAALRERLSALPVGRLDMVRGF
LGAGGQDAPPARLAFYSAPAAPAPDASTRQPRLSDLLRVHDAGLRAVLVDWLQGCYTAPSLDEALAQRAQ
LQPGEAFYVASGHAVGAHSLSFYAQDSEQSGLLARAQEIEHLEKELRAQALIAEEARTALVRAEAAYADA
SQRLVAARREATEAQGRAHELQVETLRLTQLAEQTRARSEQIGADLAEVEAQLADLQERRAASEARFEEL
DMQLADSQERHAQLGDRVIEAERRLAECREQQRQLERRVQEAQFSHRSLQARRAELARTVDTAATQARTL
HDERQRAQDELARLSDAAAQGGLQQALELKMEREKQLAAQRSQYDELTARLRASDERRMQHERQLDPLRA
RITEFQLKEQAARLGLEQYSQLLQDAQADLAAVARSIEEGGVRAAGLSGEIDRLHREIAALGAVNLAALD
ELTLARERKTFLDAQTEDLQLAMTTLEDAIRKIDGETRTLLSGTFETVNGHFGRMFPELFGGGQARLIMT
GDEILDSGVQVMAQPPGKKNQTIHLLSGGEKALTAIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYAK
LVTSMSKGTQFLFISHNKIAMEMAEQLIGVTMQEQGVSRIVAVDMESALSMAEA
>gi|319762937|ref|YP_004126874.1| zipa ftsz-binding region protein [Alicycliphilus denitrificans BC]
MSNFQLGLILAGALVLAAVVAYNAWTTYRNAPKRARPPEGEGAQEPAVRQEPAFDGAGLGNPATAGPEPH
FEGHAVDPGDAIDLPVPPAERRSGLDPLIDAIAPIVAEQQVSGDAALAAMPPTRRAGSKPFAIEGFSEAA
QQWETPQPGQRYLHFQAGVQLANRLGALNEIEFSEFVMKTQGFADAINATPDFPDMLQEVARARELDQFA
SDHDAQLAFMLRARQAAWSPGYVQQNAARLGLVAGAIPGRLVLPASGAGLPPMLTLTYDAQAAMSDDPEQ
SAVRDILLSLDVAQVHRGEQPFKRLREVAAALCQAMDGVLCDQNGTPLPAMTMEPIAADLELLYDKLDSR
ELSAGSALARRLFS
>gi|319762938|ref|YP_004126875.1| DNA ligase, nad-dependent [Alicycliphilus denitrificans BC]
MTEKSELFSAPAPAVPALVASKVEALRAQLNQWAHEYYVLDEPSVPDAEYDRVFQQLQALEGAYPALVTP
DSPTQRVIGAVMNGLAPVRHRVAMLSIRTETDTEASGAEAFDARIRRELKLAPEDPPVEYVAEPKFDGLA
MSLRYEHGRLVQAATRGDGEVGEDVTHNIRTIRQIPLTLQLSAPTLGADASSLPPEGARFALGRPGGETA
PPVLEVRGEVYMRRADFEQLNERQREKGDKTFVNPRNAAAGAVRQLDSGIAAQRPLSFFAYGLGEVEGGP
EFATHYALLQRLKAWGFPVAAQVRIALGAPGLIAFHQQIGAERDQLPYDIDGVVYKVNSLALQRQLGFVT
REPRWAVAHKYPAQEMMTRVEGIDVQVGRTGKLTPVARLAPVFVGGVTVTNATLHNLFELRRKRVRVGDQ
VIVRRAGDVIPEVVGVVPAPRASYVPNFRMPRQCPICASTVVREPGEVNHRCSGGLFCPAQRKQAVLHFA
QRRAMDIEGLGEKLVDQLVDGHVIRTLPDLFRLDLPTLAGLDRMAEKSAQNVLDALQKSKQTTLPRFLFG
LGIRHVGEATAKDLARHFGALDAIMDAGVDQLLQVNDVGPVVAESIHTFFAQPHNREVVGQLRECGVAWE
EGEPTAGATLPLAGKTIVLTGTLPTLSRDEAKDMLEAAGAKVAGSVSKKTHYVVAGAEAGSKLEKAQALG
IPVLDEDGLRALLRGEG
>gi|319762939|ref|YP_004126876.1| patatin [Alicycliphilus denitrificans BC]
MALARRAPRLGLALGSGSARGWAHIGVLQVLQEEGIRPDVVCGSSIGALVGAAYAAGELERFGEWVLGLG
MRDVFGFMDFNLAGGMLKGEKLIAFWRRNFADFTIEDSPLPFGAVATDLHSGAEVWLREGSIADAVRASI
ALPGLFTPVVREGGRLLVDGGLVNPVPASLARAMGADIVIGVDLNADILHRHMHPLAVVRAPDADAPEDG
VAPPEPEPARNGDWMRRLKFWADGKAPAPRQPSMLDVMMTSVNIMQMRITRSRMAGDPPEVVVAPRLAHL
GQLDFHRAKEAIEEGRRAAHASLPQLRQFMG
>gi|319762940|ref|YP_004126877.1| peptidoglycan glycosyltransferase [Alicycliphilus denitrificans BC]
MTFPASLRARWALLWPRLARLARRPERWASAHGLLWLLAALALAVFLYVLALIPFTPAISDIRKAKSDQP
AQLLSADGRLLAEYRWVNREWVPLDTIARPVVDALIATEDHRFYDHFGLDWRRTASALVRTLGGDKQGGS
TITQQLARNLYPEDIGRAPTLTRKIKEAITALKIEWLYSKDEILETYLNTVPFLYNAYGIEMAARTYFNK
SADKLTVLESATLIGMLKGTAYYNPVLNPERAQARRNTVLAQMKKRGKLSAAEYDKLVKRPLRIRFERQN
EVAGLAPHLAQQLRRQLIDWADRNGYSLYSDGLVIHTTIDGRLQEIANQAVQRQGRQLQGVADAAWAPRS
AWGAKSPLVQQLVRESPQYEKAVAAGTAPEEAAKRLLDDAGFLRSLRQAKTRVQAGFMALDPRNGAVLAW
VGSRDYGVDPFDHVQAARRQPGSTFKPFVYGAAFAKGMLPTDELMDTTVEIPLGGKRVWRPTDGRTPPSE
EPMQLRDGLAYSKNTITAQLMQQVGPERVAQLARAMGVRESKLEAVPALALGTSSVTLKEMVAAYGTIAN
GGRYMAPQVITRIEDKNGRLLEAFKPASPERALGLAAAQELRDAMRGVVDKGTGVAIRSRYGITADVAGK
TGTTQDNTDGWFILMHPQLVAGAWAGFNDGRITLRSDYWGQGAHSALPIVGDVFRQALRAKIIDARERFI
DEEESSWIATATGTLRNWVYDLFGRPTGEQAGPAGAPPAPQPDLPRAPAPAASAPPQEERPEIIEAPLIP
LQEVAPRANAPAEPPVWVEQPAPEAPQPAAPSAAPGVVIVPVVPRPQGAAPLLAETR
>gi|319762941|ref|YP_004126878.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MQPPRQAPRARIPAAVWALGLVSMLMDISSEMIHSLLPMFMVGTLGMSALAVGLVEGLAEATALMVKVFS
GALSDYFGRRKSLALLGYALGAFTKPLFAMASGAGLILAARLIDRVGKGVRGAPRDALVADITPPEIRGA
AFGLRQSLDTVGAFVGPLLAAGLMLLWADDFRAVFWVAVVPGLLAVAVLALGVREPERHEGARRTNPIRR
ENMRRLGPAYWWVVAVGALFTLARFSEAFLVLRAQQAGIAMALVPLVMAAMNLVYAAAAYPFGWLSDRVG
HTRLLAWGLVVLIAADALLATAQHWSMVIVGVAVWGIHMGMTQGLLATMVANAAPADLRGTAYGVFNLAS
GLAMLAASVIAGLLWETVGPAATFWAGGAFAALCLAGLGRRRGSGALR
>gi|319762942|ref|YP_004126879.1| nudix hydrolase [Alicycliphilus denitrificans BC]
MIFRRPIKHCRECGAAVAYRLPGDGDTRERAVCPVCGTIHYENPLMVVGTVPVLGERVLLCKRNIEPRWG
KWTLPAGFMELDETTEQGAARETDEEAGAQIELGPLFSLLNVPQVGQVHIFYLATLLSDRFDPGHETIEA
RLFTEDEIPWDEISFRTVKKTLERFFADRRAGRFGVHCVDIT
>gi|319762943|ref|YP_004126880.1| fumarylacetoacetate (faa) hydrolase [Alicycliphilus denitrificans BC]
MSYVIPAPVQASVPVLGSADRFPVHRIYCVGRNYAEHAKEMGFTGREPPFFFMKPADAVLPVSAGETGSM
PYPSLTKDLHHEIELVVAIGKGGRNIAAADARQHIWGYAVGLDMTRRDLQGEMKKQGRPWCIGKGFDAGA
PIGPITPAAQAGDVERAAIWLQVNGADRQRSTVDQLIWNIAETIEHLSAAWELQPGDLIFTGTPEGVGAV
VRGDVLEGGIDGLGRLRVALV
>gi|319762944|ref|YP_004126881.1| maleylacetoacetate isomerase [Alicycliphilus denitrificans BC]
MKLYNYFRSSASFRVRIALELKGLPYDYVPVHLQKGEQRAPAYASRLGDALVPALQTDDGHLLAQSMAII
EYLDETHPEPPLLPGGALARAHVRALAQMVACEIHPLNNLRVLKYLKHQLKVPDAAKDDWYHHWVRQGLE
AFERQLALLDRERAAAGLAPSRLCWGDAPTLADCCLVPQIFNGQRFGVDLGGLSRTMAAFKACMQLPAFQ
RAQPSACPDHE
>gi|319762945|ref|YP_004126882.1| hypothetical protein Alide_2259 [Alicycliphilus denitrificans BC]
MSEPVAHPVPHDWLQPDWPAPAHVRALCTTRNGGVSTPPYDSFNLGRYVGDAPEAVQANWAALQAALGAG
GRPVRPVYLRQVHGTDVLPLDKDTPEGADADACTTRARGVACVVMAADCLPVLFTDRAGTRVAAAHAGWR
GLATGVLEETLKQFLAPGHARQAPAAIEDEAPRSPGDVIAWLGPCIGPQAFEVGPEVRDAFCAQDPQAAR
HFRPHGGAGKLLADLAGLARQRLRERGVTALYGNDGSPAWCTVGNPSRFFSHRRDSPVLGTSGRMAACVW
LT
>gi|319762946|ref|YP_004126883.1| hypothetical protein Alide_2260 [Alicycliphilus denitrificans BC]
MYLVLIGWLYVTVLMALAEGLSEQGTVLGAIITFVLYGLLPMSIVLYILGTPARKRAIRARERAEAEAAA
SGQPDAGGHAPAGAEHGAVAPVRKEP
>gi|319762947|ref|YP_004126884.1| poly(r)-hydroxyalkanoic acid synthase, class i [Alicycliphilus denitrificans BC]
MDETTDWTESARQFQQILGESWGKALQMLQPGELGKAMSMPPSAPLSFAPDKLAALQQQYMEDARALWGQ
GPHAQASKTGDRRFAGESWANNPLSAFSVAAYQLQARALMGLADAVEADEKTRARIRFSVEQWLAAMAPS
NFLALNAEAQKKALETHGESIAKGVANLLHDMRQGHISMTDESRFEVGRNVATTEGAVVFENELFQLLEY
KPLTPKVYERPFLMVPPCINKYYILDLQPENSLIRHAVAQGHRTFVVSWRNPDASLAHKTWDDYIEDAVL
TAVATVQKIAGTKQINALGFCVGGTMLANALAVLAARGQDSVASATFLTTLIDFGDTGILDVFIDESFVR
LREMQMGQGGLMKGQDLASTFSFLRPNELVWNYVVDNYLKGQTPPPFDLLYWNSDSTNLPGPYYAWYLRN
FYLENRLIEPGALTVCGEKLDLSKVKLPVYIYGSREDHIVPAAAAYASTQVLPGKKRFVMGASGHIAGVI
NPPAKKKRSHWVREDGKLPPTLDEWLAGATELPGSWWDDWCAWLAGHAGKQVAAPKSYGKAPHFKDIEPA
PGRYVKQKA
>gi|319762948|ref|YP_004126885.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MEDIVIVSAVRTPVGKFGGALAKTPATDLGALVIREALARARVAPDQVGEVIMGQVLAAGCGQNPARQAM
MKAGVAKETPALTINAVCGSGLKAVMLAAQAVATGDSEIVVAGGQENMSLAPHVLNGSREGQRMGDWKLT
DTMIVDGLWDVYNQYHMGITAENVAKAYGITREMQDALALASQQKAAAAQDAGRFADEIVGVSLPQKKGD
PVLFNADEYLNRKTNAEALAGLRPAFDKAGSVTAGNASGINDGAAAVVVMSAKKAAALDLKPLARIAAYG
TAGLDPATMGMGPVPASRKALQRAGWNAADVDLFELNEAFAAQACAVNKELAIDPARVNVNGGAIAIGHP
IGASGCRVLVTLLHEMQRRNAAKGLAALCIGGGMGVSMALER
>gi|319762949|ref|YP_004126886.1| acetoacetyl-CoA reductase [Alicycliphilus denitrificans BC]
MSQKVAYVTGGMGGIGTAICQRLHREGMKVIAGCGPTRDYEKWLNEQKALGYTFYASVGNVGDWDSTVQA
FANAKAEHGTIDVLVNNAGITRDRMFVKMTREDWDAVIETNLNSMFNVTKQVVADMVEKGWGRIINISSV
NGEKGQAGQTNYSAAKAGMHGFSMALAQELATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVNTVPVKRL
GEPSEIASIVAWLASEEGGYATGADFSVNGGLHMR
>gi|319762950|ref|YP_004126887.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MISLRNLTLRRGTRVLLDSASVSINPGEKVGLVGRNGAGKSTLFALLNGTLHEDGGDFLMPPQWRMAQVA
QHMPETAQPATDFVLDGDTRLSHLREQLRKAEQLGDGMAIAQAHADLADAGAHDAPARAQALILGLGFQV
AELDRPVNSFSGGWRMRLQLARALMCPSDLLLLDEPTNHLDLDALVWLEAWLKRYEGTLIVISHDREFLD
AVTQVTLHIDNAQLTRYGGNYSQFEELRAQQLTLQQAAFERQQAKIAHLQKFIDRFKAKATKARQAQSRV
KALERMERIAPVLASAEFTFEFQEPANLPNPMLALTDASFGYRAEDGSEKAVLSGVSRTVLAGQRIGILG
ANGQGKSTLVKTIARTMAPLGGKVTEGKGLAIGYFAQQELDVLRPDDHPLAHMVRLARELGVDAREQDLR
NFLGSFNFSGDMVLQNVGSMSGGEKARLVLAMIVWQRPNLLLLDEPTNHLDLATREALAMALNEFEGTVM
LVSHDRALLRSVCDEFWLVGRGQVGPFDGDLDDYQRYLLDESRRLREQARATAPAPAAVPAPDAREQRRL
EAQARQQLAEKTRPLKRELETIDQRLALLAQEKAQLEERLMQELPPAEIAESGRRLKTCTEEVERLEEKW
LDVSAALEELGR
>gi|319762951|ref|YP_004126888.1| hypothetical protein Alide_2265 [Alicycliphilus denitrificans BC]
MTPLSRRRMLAHALGAALLPLAGMPARAQGRYPSRPVKWLVPYLPATGPDMVARILAEAVGPFLGQPIVI
ENRPGAAGNIGTRAVAKSPADGYTLLYTGSPLAANMHIYKNPGYDALKDFRHVMRLSSSTVGLVVNADSD
IHSLDDLLARLKARPGQMDYASGGVGTPSHLGVELFLSVTRTKAMHVPYKGASELVNALLGNQVTFGMPI
FSAANPMIKAGKLRALAIAGARRNPVEPQVPTLAELGIPGVELTSFGGISVPAGTPDAVVETIYKAFSEA
LRQPKVVAALQENGGQVDVRDGAAFVQNIQQEMQLTAAMMKQLGLKPV
>gi|319762952|ref|YP_004126889.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MNASTPTTRLAAAGPALPEMPFEGSPLAAQLIAALRDFLHGELVDLARSHGIDHEHSPDKALLRQVWRRS
HALGFYGMSLPPSMGGKELSVLDQVLIKEAIYATGSPFAPHVLGELSGPPRIGALVRKATPWQMEQFIAP
VARADKAICFALTEAGAGSDAGALQTRATQDGDHYVLHGRKRFISGSPFADCAVLLASTAPEGAAEREIS
AFFVDLHAPGVEVVSGYKTMAGQSHTGDIVLDGARVPAAQLIGERGRGLALALGRITVNRLMHCPAMLGL
AQVALRDARDYALERRQFGRSIAQFQAIQHMLADMATQWAAARALMVQTARAIDAGIDARAQASMSKLFC
SEAAFGIADRAVQIHGGEGIVQGRRVEFLFRMLRMYRVLTGTSEIQRNTIARELLATPA
>gi|319762953|ref|YP_004126890.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MTSTSTPPPGSPIPNVGALVARSCRAHARLPAVTSAARSITYGELEQRSSRLANALLSGGLARGDRVGIY
LHNCVEIVEIEIACYKAGLVKAPFNARLSPREVGEIAANSEARIIVTTAARAEAFRPHLADPGVQLLLLD
GPAGSDYESRLARASAHFEPVAVREHELAVLHYTSGSSGVLKAAMQTFGNRLAQLRKFLMRGEGMQAGHV
LGLVGPITHASGMQLVPALCTGACIHLFAQFEPAGFIAEMQQRRVTHTFMVPTMINMLLAEVQGRYRPLP
DLLRLGYGAAPMAPTRILQAMDVFGPVLSQGYGAGETTSGVCGLSALDHLQARAARPERLASCGRPFLES
IVEVVDGDGNPLPQGEVGEIVVSGPDVFAGYWRAPDLTAEVLRNGRYHTGDLARMDEEGFVYIVDRKKDM
VISGGFNVYPSEVEAVLYRHQAVQDACVFAIPDDKWGEAVAAHIVLKPGAQPDPGALDRFCAEHLGGFKR
PRHIEFVEQLPKNPNGKVMRKTVQAPYWSNLSRKVN
>gi|319762954|ref|YP_004126891.1| regulatory protein lysr [Alicycliphilus denitrificans BC]
MDLRALRYFIAVVEVGSLSRAAHSLYVAQPALTAQIKKLEAELGAQLLERSHAGVTPTPAGTQLYQDARR
LLSDAEAMGERIRRLPQGPEGSVTIAVPFLLTTLLLGPVIAQLSQTHPRIRVFVLDGLSLTVQKAVLERR
ADIGIVVDTPALPGLDCQPMAQEDILLTGLDRGAAVVPLLQSDPGGGLPSLAFAHASRLPLVLQSRRFAI
RQSVEAAAEQRGLRLNIVHEHDSARVIRSLYHCGAGFTFSPACTLAEVSLAQRQQSAAPGHWIVARVTDP
ALQRRYFVTTQASRADDAATAVVRECLLAHARSLIDGGQWQACWLLDASPQAIN
>gi|319762955|ref|YP_004126892.1| protein-(glutamine-n5) methyltransferase, ribosomal protein l3-specific [Alicycliphilus denitrificans BC]
MTPAVHGATVGALIASGAQQLARAGVAFGHGTANARDEAVWLVLWRLGLPLDSVLDEDAPDSVANQPVTP
ASQALVATLFEERIATRKPAAYLTREAWLVGVPFYVDERAIVPRSFIAEILANGSIDDWLTDRTTNVLDL
CTGNGSLAVLAAMAWPEVRVTGADLSPDALAVARINVERHGLQERIRLVQSDGLAAVPGPWDLILCNPPY
VNAQSMSELPAEYRAEPELALAGGGDGMDFIHRLLREAPACMTEDAVLVLEIGNERAHFEAAFPQLPVFW
LQTSAGEDQVLLVTRAALLAAGTAAPG
>gi|319762956|ref|YP_004126893.1| succinyl-diaminopimelate desuccinylase [Alicycliphilus denitrificans BC]
MPSPTLLLTEQLIARPSVTPEDAGCLDLLAERLAPLGFACERLDSGPSSFRVCNLWAKRAATPTSQSQAA
IKTVVFAGHTDVVPTGPVEQWSSAPFTPTQRDGRLYGRGASDMKTSIAAFVVAVEEFLAATPAPAIAIAF
LLTSDEEGPSVDGTKVVVEQLRARGERLDWCIVGEPTSVQSTGDMIKNGRRGTLSGRLTVRGVQGHIAYP
HLARNPIHQAVPALAELAATVWDRGNDFFPPTSWQMSNIHGGTGATNVIPGEVAIDFNFRFCTESTAESL
KERVHAVLDHHGLEYDLAWTLGGQPFLTTPGELVGAVQQAIHAETGLTTELSTTGGTSDGRFIAQICPQV
VELGPPNDSIHKIDENIRLTDIEPLKNIYRRTLENLNAQAAA
>gi|319762957|ref|YP_004126894.1| twitching motility protein [Alicycliphilus denitrificans BC]
MSTMERILRLMGEKKASDVYLSANAPALIKINGECVPINSQILPPDAPRNLLAEIVPPERIEELEETGEL
NMGVPLTGVGRFRISAMRQRGTYAVVIRFIAQEIPKLSTLNLPPVLGALIMEKRGLILVVGATGSGKSTT
LAAMLDERNEAMTGHILTVEDPVEYQFKNKRSIVNQREIGGDTQSLQTALKNALRQAPDVILIGEIRDRE
TMSAAIAYAQSGHLCLATLHGNNSYHALNRILSFYPVEVRPTMLGDLASALKAIVSQRLVRTKAGERLPA
VEVMLNTKLVADLVEQGNFSGVRDAMEKSMAEGSQTFEEALAHLILSDRIDRKEGLAYADSPTNLMWRLQ
NDFSIAAKAAQAQQEESQPPEDDEPSFTEIVLDVKPV
>gi|319762958|ref|YP_004126895.1| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase [Alicycliphilus denitrificans BC]
MSQQLQTLIDNAWDNRASLSPASAPKEVVDAVEHVISELNNGQLRVATREGVGRWTVHQWIKKAVLLSFR
LKDNAIMKAGDLAFFDKVPTKFSHLTPDEMAATGVRVVPPAVARRGSFIAKGAILMPSYVNIGAYVDEGT
MVDTWATVGSCAQVGKNVHLSGGVGLGGVLEPLQAGPTIIEDNCFIGARSEIVEGVVVEENSVISMGVYI
GQSTPIYDRATGETIYGRVPAGSVVVSGNLPKDGGRYSMYAAIIVKKVDAKTRSTTSLNDLLRD
>gi|319762959|ref|YP_004126896.1| succinyldiaminopimelate transaminase [Alicycliphilus denitrificans BC]
MNPLLSLLQPYPFERLRQLFAGVTPSAEHSPISLGIGEPRHATPQFIKDALAEGLAGLASYPSTLGEPRL
REACAGWMQRRYGVVVDPATQVLPVNGSREALFAFAQTVVDASRPGATVVCPNPFYQIYEGATLLAGATP
HYAPSDPARNFAVDWDSVPEDVWQRTQLLFTCSPGNPTGAVMPLTEWEKLFALSDRYGFVIASDECYSEI
YFRDEPPLGGLEAAHRLGRTDYRNLLAFTSLSKRSNVPGLRSGFVAGDAALVKAFLLYRTYHGSAMGPAV
QAASIAAWNDETHVQENRALYRRKFAQVTPMLAQVMQVGLPDAGFYLWARVPDALGMSDTEFARALLTQY
NVTVLPGSYLARDVNGANPGAQRVRMALVAEAEECEQAAQRIVQFIQSRI
>gi|319762960|ref|YP_004126897.1| electron transport complex, rnfabcdge type, b subunit [Alicycliphilus denitrificans BC]
MALAQASSLPAAALQALAERIDAALPQTQCTRCGYPDCAAYAHAVASGEAGINQCPPGGAQGVARLAAIT
GRPELPLSAAHGQETPRAVAVIDENWCIGCTLCIKACPTDAILGLNKRMHTVIAPHCTGCELCLPACPVD
CIRMENASGQATGWAAWSAPQAEQARTRYRARRERLEREEQQALVAPPAAGAMPRADRPDAKAPADPKHA
AIAAALARARAQRAVHG
>gi|319762961|ref|YP_004126898.1| polyhydroxyalkanoate depolymerase, intracellular [Alicycliphilus denitrificans BC]
MLYTLYETQRTLMEPFADLAQAAAKFYSNPLSPFSETQLAHRMSAGYELLFRLGKDYEKPQFGIRTVDVD
GVSCAIHERVEIDKPFCELRRFKRFSDDPDTLLKLKEQPVVLVVAPLSGHYATLLRDTVRSMLADHKVYI
TDWKNARLVPLSEGDFHLDDYVNYVQEFIRHLQQKYGNCHVMSVCQPTVPVLAAVSLMASRGETTPLSMT
MMGGPIDARRSPTAVNNLATQRSFKWFETNVIYRVPSNFPGAGRRVYPGFMQHMGFVAMNPDRHATSHYD
YFKNLIQGDDASAEAHRKFYDEYNAVLDMDANYYLETIKTVFQDYSLVNGTWDVRSPDGKLERVRPQDIA
DTALLTIEGELDDISGSGQTEAAQGLCSGIAPERRMHYEVKGAGHYGIFSGRRWRKHVYAKVRDFIRANQ
PGQPAGAVRVRRVRTAAA
>gi|319762962|ref|YP_004126899.1| rela/spot domain protein [Alicycliphilus denitrificans BC]
MSSAIQPAHEESVFHAFYARELPALQQACAFFMALLQSILSQARHIDIAKIEGRVKDRDECLRKFSRKYR
TALEESGTPYEIHHYITDLIGVRVVCLYEDELEKVAQIVQSHFDVIDVTDKVSAMEGTEASFGYKGLHLD
LRLNAEQAALPQNAAYANQPFELQVRTIIQDAWSVLDHKIKYKKSIPAQLKRRINVLSALFELADREFRQ
IRDATAAELQRASDETAEPEPGTARAPAPGSELDAFTFLKIANHFFKDAEFDARKVDQFVDDIRAWSPGI
TRSRFNALMRETLATVKRYKQFYEEHNPEGSFTPFTVIRHCLYLGDKQLFRRALRNSSREAFEAWLQGAP
YV
>gi|319762963|ref|YP_004126900.1| tim-barrel protein, yjbn family [Alicycliphilus denitrificans BC]
MSVAPMMDWTDRHCRHLHRLLSRHALLYTEMVTTGALLHGDVPRHLRFGEAEHPVALQLGGSEPADLAHS
ARLGAQWGYDEINLNCGCPSERVQRGAFGACLMNEPRLVADCVKAMVDVVDMPVTVKHRIGIDQTEGYGF
VRDFVGTVADAGCRVFIVHARNAWLKGLSPKENREIPPLRYEVAARLKSDFPQLTIAINGSLQTDAAVLE
QLALVDGVMVGREAYHNPWWLTRWDELFFGAKPGTLTREQVEEEMVAYMEREAAAHGTHWYAVARHMLGL
RNGLPGARRWRQVWSDHRLKHLPAREVMALARIRPA
>gi|319762964|ref|YP_004126901.1| maoc domain protein dehydratase [Alicycliphilus denitrificans BC]
MKDAQAAKPLYLEDLAVGDVFVSPPHALDAQQIVEFASQFDPQPFHLDEQAAKGSFFEGLAASGWHTVAI
TMRLLVQSFPLARGVIGAGAELSWSQPTRPGDVLRVTSTIKDIAPSRSKPDRAIVVLESVTSNQHGAPLQ
KLVSKVVAFKRTA
>gi|319762965|ref|YP_004126902.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MGRSTQEKALENRARIVDRANALFRQRGVDNVSVSDVMGACGMTVGGFYKHFDSKDALVAQACGLAFTQA
LKAWDEVYENADTNARERNLELVRRYINNRSPERRCPILAFAPHVATGDAAGPAVRAYQAGIHELFEKFV
EGAGTEGEPPVPAASREAMALFAAMVGARVLNQAAGNAGWVRDIEDAVIAAAASLSPKNEKP
>gi|319762966|ref|YP_004126903.1| saccharopine dehydrogenase [Alicycliphilus denitrificans BC]
MATPQPHAAPTGGRSVLVLGAGHIGHAIALLLSDAGGYALQVADRNLSSLQRVQALAGVATVHVPDAAAL
EAAVAGCHAVLNALPFHQAAAVATLCARHGVHYFDLTEDVASTRAIRALAAGARSVLMPQCGLAPGFIGI
VGNDLAGRLDGGAQALRLRVGALPRYPQGALRYSLTWSTEGLINEYCNPCEAIVDGQRTSVPALDGLETL
LIDGVEYEAFSTSGGLGTLTRTWEGRLQQLDYKTIRYPGHHAAVRLLLHELRLRERRELLRELLEGAIAA
TRQDVVVILAVASGLRGGRLVQESYAARILGRRLRGQALSAIQHTTAAAICAALDLVSSGRLPQAGFVRQ
EQIALADFLANRFGSVYDVEGTQA
>gi|319762967|ref|YP_004126904.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MARMTSTLPDLHAVQTLPELLAFRAALTPDREAYRQCDSATGHWTSLSWSQAQERVRQWSRAIAASGLPQ
GARIAVLLPNGLDAMSIDQAAMATGCVPVPLHAIDNPGSIAYILQDAEVSLLVVQDAAQWERVRGVGLPL
PHLMGVVATAQAPAQDAGPDAVPVAPLSAWLQHAAADTPLPPPPGPEDLAAIVYTSGTTGKPKGVMLTHA
NVIADVKAVLQRIVPTPDDVFLSFLPLSHTFERTGGYYLPVASGSCVAYARSVAQLADDMLTVRPTVLVS
VPRIYERVHAKLIETLSSSPWKMQLFQAAQAVGWRRFCAAQRLPAPQDDGAGSWMRALPWPLLRALVARP
LLARFGGRVRVAVSGGAPLPPAIAQCFLGLGLPLVQGYGMTETTPVVSVNALDDNDPSTVGRALPGVEVR
IGENRELQVRGPIVMKGYWKRPEDTARAIGEGGWLGTGDQAEIVDGRIRILGRIKEIIVTSTGEKVPPAD
LELAITADPLFEQAFVVGEQRPFIACVAAVQAEEWRQLAGQLGLDPDDPASLAHPSATRAALARIEKLAA
GFPRYAVPRAVHLVREPWTIENALMTPTLKLKRNSLMAHYADAIEAMYQRR
>gi|319762968|ref|YP_004126905.1| gntr domain protein [Alicycliphilus denitrificans BC]
MKTVPLPRQALYEEVAELLRQRIFRQELEPGSWIDELKIAEEIGISRTPLREALKVLAAEGLVTMKVRRG
AYVTEMSEKDLRDVYHLLALLESDAAGVVAAAATPQQLGELEALHAELGAAAGDRERFFTLNERFHLRLL
ELADNRWRGQMVADLRKVMKLSRHHSLFKQGRIEDSLAEHEALMAALRARDAQGAAQAMRAHFAHGLEAA
G
>gi|319762969|ref|YP_004126906.1| pyruvate carboxyltransferase [Alicycliphilus denitrificans BC]
MLRSVTVTEVGPRDGLQLIAKPVSTEAKIAWIKALHAAGLRDIEVGSFVSPRLVPQMADSAAVVAQALRI
EGLKVYALAANLKGAMAAYEAGAHIIVIPLSASDRHSRANVNKGTLEHIAAIGDIIEWLRAQPRPVRIDC
VTASAFGCSVAGTVPLGDVVAAAKALALAGADRITLADTVGHAHPALVRDTVRAVQDAVGPLLQKLHLHD
TMGLGLANALMGLQEGIREFDACMGGLGGCPFAPGASGNIVTEDLVFMLESMGFATHVDLPALLAARAAI
APHLPAQALRGGVPVAGIPSTYQPASGCMH
>gi|319762970|ref|YP_004126907.1| hypothetical protein Alide_2284 [Alicycliphilus denitrificans BC]
MQRRILIAGLMATAAFAHAQPPAPFPAKPIRVIIPSTPGGGTDFIGRNLATHLAEAKGWVMVPDNRPGAG
TALGLAELARAAPTGYDIVIGQSDNVSLIPLLMKTSYDPIKDLQPVSLLATTPMVLLVTADSPYKTLAQL
IDAARKEPGKISYGTSGTGGSVHISVEMLQAAAGFKMQHVPYKGSSPALADLMGGHLQVAGASISSATNL
IQSGKVRALAVTSAARNASLPDVPTVAESGYKDYSFVTYYGVFAPAGTPADVVKTLNDAVVQVMARPDVR
AAYAKQGLEASSTTPQEFSRLIEKDIAKAKATIQAAHIQVQ
>gi|319762971|ref|YP_004126908.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MTSPSASAPSPYLAPDDLPLKGVRVLEISHMIMGPATGMALADLGAEVIKVEPVEGDRTRRLKSAGIGYF
PVFNRNKQSFAVDLKSAEGRKLVQDLADKADIVLENFRDDSLLQYGLDHASVRARNPRAIYVSLKGFLSG
PYQERTALDEVVQMMGGMAYINGSDDRPQRAAPSVNDILGGQFGVIGALSALHERERTGVGKYVRAGLFE
TNLLLVAQFITQFELTGTPALPFGSKREPPWGVYDLFTTKDGARVFVAVVSDAQWRTFAATFMPAGWAED
ARLFSAIDREAARPWVVPAVAEVLKNWNSADLCEALEKAKLSYAPVNQPHDLLKDPHLTQGGALMPTLLP
TGEHVSTPALPLEFDGLKVGKRADPPQVGEHTVAILKDLGLDDEAIALLRQHGKIGG
>gi|319762972|ref|YP_004126909.1| hypothetical protein Alide_2286 [Alicycliphilus denitrificans BC]
MGAHLKTLREQRGLTQAALAQALKVSPSYLNQIENNQRPLTVNVLLRLQAAFGIDLQQFSEDSQARQLGQ
LRSALADMPGGDQVPLAETRILAEQLPAATRVLLGLHKRIRAAEERLSVIAENTDSGHAAHATSAPVQPY
EEVREFFYAGHQHLALLDEQAEQLYLQLHPENTDPHAPHAARLVAALEQRLRSLHGITVLRAAGSPAVEQ
PVRMLERASHQLRLGAGLSAGQQAFQLGIQLALLESGPTIDGFTNAANFGSDEARALARIGFANHFAAAL
LLPNRLFQKTADELRYDIDLLGERFGVGFETVGHRLSTMRHASPHSIPFFFVRVDRAGNMSKRQSSVDFH
FSRTGGTCPLWNVYDAFSQPGKILTQLARMPDERTYLWIARTVEHRRGGYGTPGRIFSVALGCDARHAHR
LVYGDGLGLDAPERAVPIGSGCKVCDRESCVQRAFPALGRPLSIDPNARRFAPYAPAS
>gi|319762973|ref|YP_004126910.1| methylmalonyl-CoA mutase, large subunit [Alicycliphilus denitrificans BC]
MVFDFGDLQRWNKAASKSAPQGDAENLNWTTPDGITVKPLYTAADLEGLPYTNTLPGFEPYLRGPQATMY
AVRPWTIRQYAGFSTAEESNAFYRKALAAGGQGVSVAFDLATHRGYDSDHPRVTGDVGKAGVAIDSVEDM
KILFDQIPLDKVSVSMTMNGAVLPVLAGYVVAAEEQGVSQDKLSGTIQNDILKEFMVRNTYIYPPKPSMR
IIGDIIEYTSKNMPKFNSISISGYHMQEAGANQALELAFTLADGKEYVKTAIAKGMDVDEFAGRLSFFWA
IGMNFYLEIAKMRAARLLWCRIMKGFDARNPKSLMLRTHCQTSGWSLTEQDPYNNVVRTTIEAMAAVFGG
TQSLHTNALDEAIALPTEFSARIARNTQLIIQEETHITNVIDPWAGSYMMEKLTQDMADAAWKIIEEVEA
MGGMTAAVDSGWAKLKIEAAAAEKQARIDSGKEVIVGVNKYKLAKEDPVDILEVDNVKVRESQIARLNAI
KAKRDQSAVDQALAALTSAAESGQGNLLDLSIKAIRLRATVGEVSDALEKSFGRHRADTQKVTGVYAAAY
DSAEGWEKLKGEIDAFAESQGRRPRVMIAKLGQDGHDRGAKVVSTAFADLGFDVDIGPLFQTPEECARQA
IENDVHAVGVSTLAAGHKTLVPAIIQALKEQGADDIIVFVGGVIPQQDYEYLYNAGVKGIYGPGTPVPAS
AKDVLEQIKKAIA
>gi|319762974|ref|YP_004126911.1| lao/ao transport system atpase [Alicycliphilus denitrificans BC]
MTSHPLLEAITRGAPLVRRRAMAKAITLLESTRPDHRAQADALLTELLPHTGRALRLGISGVPGVGKSTF
IEALGIYLIGQGLKVAVLAIDPSSSVSGGSILGDKTRMERLSMQENAYIRPSPSGGTLGGVAEKTRESLL
VCEAAGYDVVIVETVGVGQSETAVHGMTDMFCVLQLPNAGDDLQAIKKGVMELADLVVINKADIDAAAAT
RAQAQITSSLRLLGFHGNPEHDPHNAAQWRPRVIQTSALQHQGMEDFWAVVCEFRQMQTANGRLAARREK
QALAWMWERIDFGLKQAFRAHPQVRALLPQMQADVAAGRIAASTAARNLLAAQSG
>gi|319762975|ref|YP_004126912.1| carboxyl transferase [Alicycliphilus denitrificans BC]
MQTILDQLEKKRELARLGGGQKRIDAQHGKGKLTARERIELLLDEGTFEEWDMFVEHRCADFGMQDNKIP
GDGVVTGYGMINGRLVFVFSQDFTVFGGALSEAHAEKICKVMDQAMKVGAPVIGLNDSGGARIQEGVASL
GGYADVFQRNVMASGVVPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVTGPEVVKTVTHEEVTSEE
LGGALTHTTKSGVADMAFENDVEALLMLRRLYNYLPLNNREKPPVRPSKDPADRMDRSLDTLVPANPNQP
YDMKELILKTVDDGDFFELQPEYAKNIIIGFARMEGQTVGIVANQPLVLAGCLDIKSSIKAARFVRFCDA
FNIPVITFVDVPGFMPGTAQEYGGIIKHGAKLLFAYAECTVPKVTVITRKAYGGAYDVMASKHLRGDVNL
AWPNAEIAVMGAKGAVEIIFREDKNDPVKLAAREAEYKERFANPFVAGARGFIDDVILPHETRKRICRSL
VMLREKKLENPWRKHGNIPL
>gi|319762976|ref|YP_004126913.1| acetyl-CoA carboxylase, biotin carboxylase [Alicycliphilus denitrificans BC]
MFTKILIANRGEIACRVIATAKKMGIATVAVYSDADKEARHVKLADEAVHIGAAPSRESYLQADKIIAAA
KQTGAQAVHPGYGFLSENEDFARRVEEEGIVFIGPKHYSIAAMGDKIASKKLAGEAKVSTIPGHNEPIES
PEEAVQIAQKIGYPVMIKASAGGGGKGLRVAFNDKECFEGFTSCRNEARNSFGDDRVFMEKFVQEPRHIE
IQVLGDAHGNVVYLNERECSIQRRHQKVIEEAPSPFISDATRKAMGEQAVALAKAVKYQSAGTVEFVVGK
DQDFYFLEMNTRLQVEHPVTECITGLDLVELMIRVAAGEKLPLTQADVKRDGWAIECRINAEDPFRNFLP
STGRLVRFTPPQETMFQADTGRKYGVRVDTGVYEGGEIPMYYDSMIAKLIVHGTDRDDAIAKMRAALNGF
AIRGINSNIPFQAALLAHPKFVAGQFNTGFIAEHYAHGFVAEDVQHEDPDFLVALAAYMYRRSRARASGI
SGQLAGHEVQVGEEFVVVVLGTEGKNQYHDVSVTDFENDSGSSVVHIRDKDYRISSTAHLGSIRIQGACN
GQGFTAQIERNRPKNPLGLRIVHNGAQIDAIVLTPRRAELLKLMPYKAPPDLSRFLLSPMPGLLVDVAVQ
PGQKVQAGEKLAVIEAMKMENILFAAQDGVVSKIVAGKGESLAVDQVILEFA
>gi|319762977|ref|YP_004126914.1| lactoylglutathione lyase [Alicycliphilus denitrificans BC]
MTRPFKVLGIQQVAIGGTDKARMKTLWVDMLGLAQTGTFQSERENVDEDILAMGQGPYKVEVDIMQPLDI
DKKPAVHATPLNHIGLWIDDLPRAVEWLTAKGVRFAPGGIRKGAAGYDITFLHPKGNDEFPIAGEGVLIE
LVQAPPEVIAALG
>gi|319762978|ref|YP_004126915.1| biotin synthase [Alicycliphilus denitrificans BC]
MTLATTTAPTACAQDAGANQPLHFHPRGPAPSAMAAEGQGWSVQAVQNLLDLPFMELLWRAQAAHRAHWP
EGDVELATLLSVKTGGCPENCGYCPQSAAFDTGVKGQKLMEAEEVVRAAQAAKDAGATRFCMGAAWRAPK
DRDIEKMTALIAAVKGLGLQTCATLGMLQQHQARALRDAGLDYYNHNLDTAPEYYQDVVSTRQYQERLDT
LRHVRTAGIGVCCGGIVGMGEAPVHRAGLIAQLANLDPYPESVPINSLVRVPGTPLADSAPVDPLDFVRV
IAVARITMPRARVRLSAGRQQLGDAVQALCFLAGANSIFYGDKLLVTGNPDVEADNRLLARLGLRGTRAQ
GAQEGAC
>gi|319762979|ref|YP_004126916.1| twin-arginine translocation pathway signal [Alicycliphilus denitrificans BC]
MPHASTTFLNRRQLLAGGAAAATAPWLPQARAQAAWPTKPLRLVVPFAPGGSSEIVARAAAAEISKTIGQ
NMFVDNKPGAAGNIAMQEVANSTDEHTLILGHIGTLAVNPFIFPRLPYDANRDFAPITLLSKVPSLYVVH
PDLPVKNLKDFIAYVKGKPGQLNYGSAGNGSAGHLAFEYLKMASGIFMLHVPYRGTGPMLTDLMAGRLQA
AAVGAPALLPFIKAGKLRCIATGTAQRLAQMPDVPTVAEQGFKGFEMTQWYGLIAPSKWPKAHLARLEAE
AVKAARSTLVKEKLAQETALAVGNSSAEFDAFIKAEQARWKPVIERAQIKPEGMG
>gi|319762980|ref|YP_004126917.1| response regulator receiver [Alicycliphilus denitrificans BC]
MRILLAEDERPLGEWLAKALEQGGCRVDWCDDGRLVERALAERDYDALVLDLGLPGRDGGTILRRLRARD
ERIPVLVLTARDTLGERVRSLNEGADDFLAKPFELAELEARLTALVRRARGSEHPRLACGPLQFDTVTRQ
FTLSAEPLQLSPREHALLKALVQRSGEPLTRQQAMDRVFGDDEDVQPSVIDVLLHRLRKRLEGSGVRIHT
YRGLGYVLELDTPGQH
>gi|319762981|ref|YP_004126918.1| two-component sensor kinase domain-containing protein [Alicycliphilus denitrificans BC]
MSWSWIRQASTRQRLLALLLPAMTLMAAVGLWFTREDAIASTNAAYDRSLLGAIRALDLNVSTASGGLAV
ELPYRLFEFFQLTAKGSVYFRVATADGLVELGNPDLPAPPTALQPGRPVFYDASYFGENVRVGAFMRALD
DAPEGSDSRYLVIQVAEGTASREQFTAGFVRRAALRDGALLAVLLASVVAVLGVALRPITRLAAQTRSRA
PDDLRPIEADGLPRDIQPLVAAVNQQMERTRQLMDARQSFVDDASHQLRTPLATLRAQLDYALREPDAGR
QRLALQALSAALSDAIRAANQLLALARSDTAQALLEPVDLAQLARDVAVELLPLARTRGVDLGVEGDAGQ
AWARGDRELLRQALLNITHNAIEHGRGHGVVTLTAGADAQGYWLCVVDDGPGMPPELAGRAGQRFAKGRE
SRGSGLGLAIARSVIGRHGGTLRLETAPLGQGACVTLWWPLA
>gi|319762982|ref|YP_004126919.1| hypothetical protein Alide_2296 [Alicycliphilus denitrificans BC]
MKAGLLLRALLAWLLLACGAAAQTGPRCIAPAKPGGGFDLTCQALGRLLHASGQLAQPLPTVYQPGGIGA
LAFKSSVTQRPGDGGALVAFSSGSLLNLAQGRFGPYDERSVRWLAGMGMDYGVIAVRQDAPYRTLPALVE
ALRAQPARVVFGAGGSIGSQDWMKAALLARAAGVSHKVMRFVAFEGGGEAFTALIGGHVQVVPGDAAEVA
RLVEQGAPIRILAVLAAQRLPGRWARTPTAREQGLDIEWPILRGVYLGPGVSEQAFRHWAGVLERAMQHP
AAARELEQFGLQPVALTGAALDAAVRSQMDGYRRMARDFGVMR
>gi|319762983|ref|YP_004126920.1| osmc family protein [Alicycliphilus denitrificans BC]
MNNELVTVELAQVADYRYENRFGGGVPALFSDEPAPLGSGQGPSPVQLLCAAVGNCLSDSLLFALRKFKQ
QPEPLHTTVQAEVGRNAEGRLRILQMTATLRLGVPAQQLQHLDRVLGQFESFCTVTQSVGQGIPIAVKVV
DAEGSVLK
>gi|319762984|ref|YP_004126921.1| rhodanese domain protein [Alicycliphilus denitrificans BC]
MTTPSARPLVVDVRSPGEFAAGHVAGSINLPLDTLPDAASRLLPERDAPIVLCCVSGARSDMAAQWLRAQ
GYTQVTNGGSVGAVALRLGNVIHKENA
>gi|319762985|ref|YP_004126922.1| hypothetical protein Alide_2299 [Alicycliphilus denitrificans BC]
MTSWRVVRIFAGTFILLSLALGIPGSPIFVSQWWLAFTAFIGANLLQSGLTKWCMLETMLRKLGIQPGC
>gi|319762986|ref|YP_004126923.1| fad-dependent pyridine nucleotide-disulfide oxidoreductase [Alicycliphilus denitrificans BC]
MTGPARITILGAGFGALSCVRELRRRDARAQITVVAPRAELHYLPSTIWIPGGLRRREDLIVPLAPFFER
MRVRHVAAEVTGLDDGGRTVHTTGGAVGNDALVIATGGRFIKKLPGIEHAITPCEGIAAAEQIRDRLRAM
QGGTIAVGFAANPQEQQAVRGGPMFEFLFGIDAQLRREGRRERFELVFFNPSREPGARLGAKTVQGLLAE
MARRGIATHLGHKMVRLEADKVVTEGGEIRADLILFMPGMTGNAWFDATTLPRSPGGLVRADAQCRVEGW
QHCYVVGDSGSFPGPDWAPKQAHMADLHARAAAQNLLDGLAGRPQQAGFVPELACIIDTGTHGTLVLRNP
QRTLVLPPLRLMHWAKRAFERRYLRQYR
>gi|319762987|ref|YP_004126924.1| fad-dependent pyridine nucleotide-disulfide oxidoreductase [Alicycliphilus denitrificans BC]
MAHIVILGAGTGGMPAAYELRATLGASHRITVVNAVEYFQFVPSNPWVAVGWRERKDTTLPIAPSLEKKG
IAFIAQRVERIDAAGNALELANGERLAYDYLVITTGPKLAFDEVPGAGPVDGHTQSICTVDHAEKAWADY
QAFLQDPGAAVIGAMPGASCFGPAYEFAFIFNKDLQRRKLRHKVPLTFVTSEPYIGHMGLGGVGDSKSLL
ESELRGFDIKWITNAKTTRVEAGKMFVTEMDEAGQPKKEHELPFKFSMMLPAFKGVDAVAAVEGLCNPRG
FVLIDEYQRSKKYRNIFSAGVCVAIPPVEATPVPTGAPKTGYMIETMVSAIVHNIAAELAGKPEQATARA
TWNAICLADMGDTGAAFVALPQIPPRNVNWFKKGKWVHLAKVGFEKYFMYKMKHGTAEPIYEKHVLKALG
IERLEKHTHP
>gi|319762988|ref|YP_004126925.1| outer membrane efflux protein [Alicycliphilus denitrificans BC]
MMTIKKIAASAWHKGARAHLGLYVALGLCIAPAARATDLIEAWQAAWQNDRELAVARAAHGAAQPRRDQA
AALWRPGVAMTASAGVASSDTEMRGAQFSAPGMGQSNGVDFGTSVHGGTATRIALQASQPLYNPERRAQQ
QQLALQADMDDWQWRAAQQAAMLRTAQRYLDLAVAQEALRVLDGQLDAVQKAATEAQDRFDMGAAPITAV
HEARAQRANLEAQRLAAQADLDVKRRQLADATGLPAASLDARLPAAAWAGAAQALAVWQEQADAGNPGIR
LQQLAADVARAEADKHRAAASARVELVAQAAQDRLSGSGDFGGGARNKDTRAMLGVQLTVPLYTGGYRSA
KEEESLAQWNQAQAQLDATREQVGRQVHAAWLGLQAGAQRVQALQEALAASLARQDATRTGYEVGHRTLL
DVLHADNDTAATRLALAQARSALLLHRLQLAQLAGQLDEAVLRQASQALAGAP
>gi|319762989|ref|YP_004126926.1| acriflavin resistance protein [Alicycliphilus denitrificans BC]
MDDRKHSLGISGRIAQAFQAAQITPLLALLALLLGLFAVLVTPREEEPQIDVTMANVIVPFPGASVADVE
QMIATPAEQVLSQMLGVEHVTSVSRPGVAVLTVQFKVGVHRNDALVRLHDTLRSNADWLPRGLGAMEPII
RPKGIDDVPVVTLTLYSHDQDTGAFALERVAHSMEAELMRVPGTRTVATVGGPGRAVRVELDAARMAGSG
VTVDALRQALQSANQGLPVGELLSGDRSVSIEAGPFLAHAQEVADIVVGNRGGKPVFLKDVARVEDGPLP
ATRYVWHAQVEDGKASEYPAVTLAVTKKAGANAIDVARAVMQRAAELRGTVIPADVQVAETRDYGATAND
KAQKLIQKLLFATASVVALVFVALGRREALIVGVAVGLTLTATLFASWAWGFTLNRVSLFALIFSIGILV
DDAIVVVENIHRHQALHPEKTLLQLIPGAVDEVGGPTILATFTVIAALLPMAFVTGLMGPYMAPIPINAS
MGMLLSLAVAFTVTPWLARLWMKGHGGQAQAHTGLAARLAPVFTRIFRPLLDDRHGRRNRSLLGLAVAGL
IAVSLVLPVLGWVQLKMLPFDNKSEFQVIVDMPAGTPPERTAAVLHELGAYLATVPEVTDYQAYAGTAGP
INFNGLVRQYDLRSGGEVGDLQVNLLDKHERKDQSHAIAMRVRPALQDIGRRLGANVKVVEVPPGPPVLS
PIVAEIYGPDAAGRRQVAKEVRAVLQETGGIVDLDDSAIADAPRKLVLVDRRKAALMGVPQGSIVSALHA
GLAGESVTWLRDASKYPTPVVLRLPAEQQGSLDQLLQLPVRTSQGGTVPIRELVTVTDTLREQPVYHKDL
LPVNLVVADMAGKVDSPLYGMFAARAAIADITAPDGGRIEEYFISLPSDPYRGYGLKWDGEWQITYETFR
DMGAAYGVGLILIYLLVVAHFGSYLTPLIIMAPIPLTIIGVMPGHALLGAQYTATSMIGMIALAGIIVRN
SILLVDFIRLQVRSGMEFKQAIVQSAITRAQPIMLTGLAAMLGAFFILDDPIFNGLAISLIFGIAVSTVL
TLVVIPILYFMAYRHHVDRVRGQGAAQ
>gi|319762990|ref|YP_004126927.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus denitrificans BC]
MRHRLWLLPVLAALSGLPFVQAAEPAPLTYHAVQPTQAGWLSSDAKVEAVRDTLLSAQVAGAVIALHVKA
GDRVRAGQELLRIDARMASQGAAASQAQVAAAQASLQVAGKEYERQKQLFAKRYISQAALDAAEAQWRAA
QAQVQALQAQAGVAATQSGLHVLRAPYAGVVAGVPVALGDMAMPGRPLVSVYDPALLRVTASLAQEQAQR
LRSGGGVQVELPGLMDKRLDIAAAQVQVLPTADPLSHTVPVRVQLPADLPGALPGSFARLWWQGGEADAG
ARVLVPAKAVVRRAEMTGVYVRGGNGQPQLRQVRLGLPQGEMVEVLSGLRAGDQVALEPQAAAKVR
>gi|319762991|ref|YP_004126928.1| regulatory protein arsr [Alicycliphilus denitrificans BC]
MKELPPEALEQVAAYFQVLAEPTRLRILNLLRQGEHNVGELAQACGYTAANISRHLSLMTKQGIVAREGR
GTSVYYRLTDESVDALCDLVCGNIARRLEQASETNSAFRARL
>gi|319762992|ref|YP_004126929.1| hpch/hpai aldolase [Alicycliphilus denitrificans BC]
MEIRHPLDTRLSGLLRGNSRLRGVFSGLPSPAIVEMCAYAGFEFIIIDNEHGCADLETTENMLRAARASG
IIAVVRCLPHDLSRVLDMGAGAVQIPMVSTATQARELVEQVRYPRVGRRGSAFSSRAAGYGAFGGMEHTT
RSNEGIALIPMIETPEGVENAQVIASVEGVDAVFVGPNDLAHAMGYDNNWTSQPVEAAIEKALRAIASTG
KCAGTVALTPEAEDKYAAWGARYFANVATSIITQALRKAASRGQDGISIQY
>gi|319762993|ref|YP_004126930.1| hypothetical protein Alide_2308 [Alicycliphilus denitrificans BC]
MLTPELIQTLRAVDTPTICNALEIAMGSRVAHGFTYGALVAAPKPLPAMVGIARTARIRASTPSQLDAAT
MRGTRLAYYRHVASHPQGPVIVVMQDMDDRPGTGSFWGEVNSAVHEGLGVGGVLTNGSVRDIGDLSPTFP
ILAGSVGPSHAHVHIVDFGQPVEVFGLQVNDGDLIHADRHGAVIIAPRYLKQMPECIDLVKRKEAPLLEA
ARSGKFDLGMLEEAMLHADEIH
>gi|319762994|ref|YP_004126931.1| hypothetical protein Alide_2309 [Alicycliphilus denitrificans BC]
MFDSFKFKRRRVLSALKAAVLGASLGSVAAFAQTAGPQGYPHTGRVVIVVPFAPGGATDIIGRLIADELG
KRWGTAVVVENKAGAGGGIGTEYVARAKPDGYTLLLGTQTALAVNPHLLKKISYDVEKDFAPITELADTP
LVLLASKKSGARNVQELVAAIKAKPDAVSYGTSGNGTSQHLTTLMMLERIGAKAVHVPYKGSSQSLVDLA
GNQIDMQFDNMATALAFAKNGQATALAVTSRKRTPLQPDLPTLDEAGVPGFEAVTWLGLLAPAGTPAPVV
SFLNKEVVAVLKSEGVKERMAAQGFSPRPMTADAFRQFIREETVKFSNLIKANNLAID
>gi|319762995|ref|YP_004126932.1| secreted protein [Alicycliphilus denitrificans BC]
MSINQLRRRSIGLALAMVSTIGWQSASAQTEAWPSKPVRYIVPFSTGGVSDGVARLIAQKLGERLGQPVV
VENRPGVSGIVGTQAAARSPADGYTIMGGTITTHAVNPFFNENLGYDPVKDFAPVNLVGMVSNVLVVPAG
SRFNSVAEITAELKARPESLTYGTAGAGTSQHLSGQLYQSLTGTKLRQISYKGGSQAMVDLVGGQIDMVF
ETVAAARPMIDGKRVKVLGVTSKKALRSLPGVPSLDEAGVTGFEMQSWQGVFAPAGTPKPIVERLGKEIA
AIVASPDMQERLRNLGVEPDGRTAEPFAAFQRSEIAKWEKVIRDARIKAE
>gi|319762996|ref|YP_004126933.1| periplasmic binding protein/laci transcriptional regulator [Alicycliphilus denitrificans BC]
MKLNVTAQDVARLARVSQSAVSRTFTPGASVSEETRNKVMLAAQTLGYRPNALARSLITRRSRIIALVMS
YLENQFYPLVIEKLSQKLQKQGYHVLMFISDLDEADAVLTEILQYQVDGIVMASTTLSTALAKTCADAGV
PVVLFNRVPDTSALARHSTSSVTSNNYLGGRMVAELLLERGYRRLAFLAGLENSSTNQERERGFNDVLEE
AGLAPYRREVGHYSFSGAQEATRKLFCSGPYPDAVFVANDHMAIAAMDVLRLELGLRVPEDVGVVGFDDV
PQAAWGSYRLTTVVQSVEDMVSATVDLLHEQMQGEVNSRNVIVPCRIVERDSVRLHPSPDTAKSHQ
>gi|319762997|ref|YP_004126934.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MLPRTPSFRLDGKRALVTGAGRGIGLAAAAALAQAGAAVTLAARSENELRDACGRLRGEGGQCDYMVLDV
TDSRAVDEQLAGQGAFHVLVNNAGMNRPKPLAQLQDEDIDAVLDLNVKAAFYVTRAVTRRMAAEGIRGSV
INVSSQMGHVGSPRRTLYCASKHAVEGMSKALAWELGAAGIRVNTVCPTFIETDMTAAMFQEPGFRQWVT
ERIALGRLGRMEELMGAFVFLASDASSLMTGSALLLDGGWTAA
>gi|319762998|ref|YP_004126935.1| histidinol dehydrogenase [Alicycliphilus denitrificans BC]
MIRYLKRGKAMQVRAEEDAKVRATVECIIKDIELRGDEAVREYSRKFDQWDPADFRLSQAEIDAARKSLS
AREIEDIAFAQKQVRNFAQIQRDSMKDVEVQTHPGVILGHKHLPVNAVGCYIPGGKYPLLASAHMSVLTA
KVAGVKRVVSTAPPFQGKPHPAIVTAMHMAGADEILVLGGVQAVVAMAVGTQSIAPVDMLVGPGNMFVAE
AKRQLFGRVGIDLFAGPTETLVIADESVDAEMCAVDLLGQAEHGPTSPAVLLTTSEKLAKETMAEVERQL
RILPTAAIAAQSWAEYGEVIVCDSDEEMLEKADELASEHVQVMTRDPDYFLNGLSNYGALFLGPRTNVSF
GDKVIGTNHTLPTNKAARYTGGLWVGKFLKTCTYQKVLTDEASALMGEYCSRLCHMENFAGHGEQANLRV
RRYGTRADVPWYRPVPAEA
>gi|319762999|ref|YP_004126936.1| methyltransferase type 11 [Alicycliphilus denitrificans BC]
MQSASELWFDEAYYQRYYFDKKTSVVDPAHAERLGAFVCSYLHYLRVPVTRVLDMGCGIGLWRDMVARHL
PGARYHGVEYSAYLCERFGWERGSVVDYQAGEPFDFVICQGVLPYLGTQDLRRALDNLGRLCRGALYLEA
VAREDYERDIIDEDLTDPRLYRHRATLYRRGLEPHFIDMGGGLWLSRQAQVPLFALESPGQ
>gi|319763000|ref|YP_004126937.1| dtw domain containing protein [Alicycliphilus denitrificans BC]
MAAPPFRRSTCARCMRPGAACLCAAVRPVSHRVQVLILMHPLELHQAKGTARLLHLCLQHSRVVVGETFD
PDALAQALTAPWSDADRLAPRRAVLLYPPSPPDPQHPMQAPPPHWLDAPDLLRLVLLDGTWRKSRRMLWG
NPLLQALPRLALHAPPASRYAIRKAHAPHQRSTLEAAQQALLQLEPSNPDIAALGAAMEAFIAQQRVHWP
AARSAMLDPPDP
>gi|319763001|ref|YP_004126938.1| uncharacterized peroxidase-related enzyme [Alicycliphilus denitrificans BC]
MAQRYPFPDLNALPEDIRARILEVQDKAGFIPNVFLAFARRPAEWRAFFAYHDALMLKEDGSLTKGEREM
IVTATSAANQCLYCVVAHGAILRIYEKNPLMADQVAVNHRKAAISPRQRAMLDFAMKVSQRAHEIEEADF
EALYPHGFDDEDIWDIAAITAFFGLSNRMANFAGMQPNPEFYLMGRMPREKKA
>gi|319763002|ref|YP_004126939.1| sulfatase [Alicycliphilus denitrificans BC]
MLQTPSSACTSPLSPGPLRRILRQVDGWFSTPLSAQQVVLRLSVYLVLAANWPLWLQLARIGGAPSLYMR
SVAALAVLIACGMVAIFAFLAWTRGMKLLWWLVVLVAALSQYYMLTYSVVMDPGMAANVLQTDAHEVADL
LSLRMLLAVLAVLLLPTWWLLRVRIPAMRPLRQVWRNLAMLALALGVAAGTVAATSRDLAPLMRNHSQLR
YLMNPLASLYSTTVSAMQPVFARSRTLVPMTQGAALGDSYAAAARPLLFVLVVGETARADHFGINGYGRD
TTPELARRGVMSWRNVRSCGTSTLASLPCMFSPLGKSGFESRDAEYENLLDVVQAAGLAVLWLDNQSGCK
GVCDRVPHAAASEGLDERARAGLCDGGECRDEAMLHGLDARLAAMPAAQRERGVLLVLHQMGSHGPAYYK
RSAGAAKRFMPECRTEVLADCAHGELVNAYDNSIVATDIFLGKTIDWLREKGARYDTGMLYLSDHGESLG
EYGLFLHGMPYGMAPDVQKHVPMVAWLDDALLRRERLSAACLRAGADARLTHDNLYHTMLGLLDVRSPSY
RHPLDAFDGCRGTALAFK
>gi|319763003|ref|YP_004126940.1| pap2 (acid phosphatase) superfamily protein-like protein [Alicycliphilus denitrificans BC]
MLVWTRHRLWVLTLFLFSLLVLWDAMGFDLPLARLFGSAQGFAWRNQHTVVLLMHELPRYASGMLLALLV
LGVFRPWGFLRRMVVAQRWQLVLSIAAGLLAVSALKRLSATSCPWSLAEFGGVAQYVSHWAWGMHDQGPG
HCFPAGHASSAFAYVAGWFVLRRAAPGVAGAWLATALLIGTVLGVVQQVRGAHYMSHTLWTAWVCWAVGL
AADMLAHARHYSLAADTKLSEAFRFSQNRRPR
>gi|319763004|ref|YP_004126941.1| response regulator receiver [Alicycliphilus denitrificans BC]
MRVLLVEDDAALSEAVCGYLRAKAFVVDAVPSLAQASAALHAAQYAAVLLDLHLPDGDGLGLLPQVRSLK
QRPIVIVLTARDQVSDRIHGLDAGADDYLVKPYDPGELLARLRAVERRRNAAHVPVLALGDLQIDLSREQ
VRRAGVPIALTQKEWALLRVMATHPERLHTRESLQDALYGFDDETDSNTLEVFVSRLRRKLGREHIETLR
GLGYRLVRSSAPSA
>gi|319763005|ref|YP_004126942.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MSAPAPPLPSERAQSLAVRLTRALILWVGGVWLLCALGVTWYTDREINFNFDDELVEVSHRMFDIALEHL
DAEGPRGDADGPLILPAPGSFADADLLYQLVEPDTHRVLARSAEASAEQFDVPLAPGFESTHAWRVYTLR
HPTRPIYMQVADPLRERREAVNRTLFGLIIAMVAMLPLLALLLQRIARRELRVLDTLKHEISLRNELLLT
PIDLPGLPRELRSVEDHVNRLLERLALALDVERALAANAAHELRTPLTAARLRLQTALEHGLSPADVQAA
VTALQTLSQRTEKLLQLSRAESSAPFTRHPVDLEQLATTVAQEFWQEEHAVDRLDLVQAYEGPAPVALGD
FDALAIALRNLVENALAYAGDSPVELIVGPGCALAVRDHGPGVSGDRLQALKRRHVRHSAERTGYGLGLS
IVATIAEKHDARFTLCSPLAGERGGFEARLEFTPA
>gi|319763006|ref|YP_004126943.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MSGGGVTTEVRGHVGWVTIDRPDRMNALAKATFAALVDASLELDANPEVRVVVYTGAGERAFSAGVDLKE
LDASGPMIHPMGGAGRNPNEVILELGKPTIAAINGVAAGGGCELALACDIRVASSTARLGLPEARVGMGA
NFGSVVLPQLIPRGLALELLYTGDLIDMAAASRLGLVNHVVEPSELLRFTEHLAARIAGNAPLSVQRMKA
VALKSAGLPTAAALRLNTGPNPYTSEDRIEGNRAFVEKRKPQFRGR
>gi|319763007|ref|YP_004126944.1| hypothetical protein Alide_2322 [Alicycliphilus denitrificans BC]
MLTRRIALAASLAALAVPSFAQDKYPSRPITLISPYQAGGTTETFARLLSEEFSSILGQPLVIEQKPGAS
GTIGAKFVAGAKPDGYTLLANTSQHVMYDGMYQKLPFDSMKDFKPVGILGSAPILVVVAENSPYRSFKEV
LEAAKTKNLTFASGAQGSLPHLTGERVAMQAKVKMTHIAFSGTAPALTNVLGGHVDLLYSTAASVMAQIK
GGRLRALAVSTKDRMPELPDVPTIAESGMPGFDVTAWYGVWAPKGTSPSVVKILNDALRAASDKPAVRKR
MADNSVTPSHLTAEQFAAFAEQERQVWLGVMKNAGLQPEN
>gi|319763008|ref|YP_004126945.1| alcohol dehydrogenase zinc-binding domain protein [Alicycliphilus denitrificans BC]
MKAVVCREYGGLDIARLEDVAPPPMRPGCVRVRVEAASASFASLLVMAGKHQNKAPLPLIPGTEVAGVVT
EVAGDVSRFRPGDRVIAGVQSGGYAQEVVAPQQTVFDLPDSVGFEDGAQFPTIYGTAYGALKWRAQLAPS
EFVLVHGAGGGSGLAAVEVAKALGGRVIATAGSDEKLEIARSRGAEHAINYREQDWREAVLEITRKRGAD
VVYDPVGGLTFDTSLRCIAPEGRIIPMGFAGGTIPTVPANIVLVKNITVLGIYWGYYFGWGRQPVLPSND
ARMRAAYAELFEWVIQGKLKPFVHAVLPLSDFRTALEMIASRAVVGRVILRPQAG
>gi|319763009|ref|YP_004126946.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MEVCLSNPSNGGPLSGVRVLDITAALSGPVATQILGDMGADVIKVEPPEGDSIRGMGPARHHGMGAMFLH
TNRSKRSVVLDLKLESAREAFRRLARTADVLICNTRPKAMARLGLDYARLAPANPGLVYVNIVGYGSGGM
AADKPAYDDLIQAAAGIPSLCPSGGPARYAPIAVADRVTGICAANAALGALFHRARTGEGQHVEVPMMET
IAALVLADHMAGLTFEPPIGPPVYQRYVSIRRPLPTLDGHLSMMVLTDRQWRTFFDAVGHPEVMDDPRFQ
AMAQRTQNLEALYARVESILKTRTTAEWVECLEAADIPVASIETMESLITNGHLAGSGFYQQIDHPSEGL
IRAIAKTSNWSRTQPRPTRPTPRLGEHSAEVLAEAGYSAPEIAQMFASGASKGED
>gi|319763010|ref|YP_004126947.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDALWEMPLDAEARRWQELAARLTESNFAPLADAIDREQRYPVEHLRPLLESGISGMFLPKAYGGGGASL
VALATVVETIAAGCGSTAAIMAALSLGAFPVLLGGNEEQKQALLGGLARRGEAVNFALSERGAGSDAAAI
TATAVREGDGWRIRGEKCWLGNGGHSEHFIVFALTGEPGARNNISAFWVPRSTPGAAVDFYEDKMGIRGT
TTTNFKVDVWVPRSSMVGSEGHGLKLALSTLNIGRIVVAAQALGIALCSYRAAAEFATQRQTFGQAIIDH
QGVGFMLADAATSLSAARMMVYEAAKAYDEGRDVSTLGAMAKLFASEAAHKVCDDAMQILGGRGYVKPSA
VERCYRDQRITEIYEGTSEIQRLVIARAVKRSAARPLNH
>gi|319763011|ref|YP_004126948.1| hypothetical protein Alide_2326 [Alicycliphilus denitrificans BC]
MNTDIKNEPVGAWKAVAEWYHAYFTGIVLYTVSRMGPAKAEELVYEIFCRQRRERFLCGLKKLGIDTLPP
AVAAAQYHYLSNHIGGVSVEYMYESERKAWIRYAAPRWIWAGTALCGIPPEVSRAMLLGWHAQNGTMLGN
PRLGFVCTKQTVDGQSGLEGYYCEYDRDLQPHERLRFARQEDAPDFDAAKAPKLPIDTWPAARLAKAHRN
YAMEYVRSAFPTALQLWGPDEAAHRLRMAGRMVGMQFYHETARGLRGNYAPDARGFAGFLADLGAAHGDR
TSVVEAGGAFEVRQEGWAFREGLDEWSPLLSQAWNGLLEGALQAHNRRLGMQFVDGSGSGRLELSWTIRD
N
>gi|319763012|ref|YP_004126949.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MSTELRPGALEGIKVVDASRVLAGPFAGQILGDHGADVIKIESPEGDECRGFGPPFVNGSSAYFNAVNRN
KQSVVLDLGKEQERQRLMDLLATADVLIENFKLSTLQSWGIPDARWFTQTFPRLVHCRITGYGDEGPYGG
LPGYDAAVQAMAGLLSINGDADGEPVRLGVPVVDLTTGMNAAMAALLALQARTRTGRGQLADVSLYDSAV
SVAHPFLTNFLHSGKVPRPTGNRHANIVPYNVYNTATVPLFIAVANDRLFGKLCGHLGAPDLPRDPRFAT
NRARVENRDALEVRLCEVFARLEGEALGERLLADGVPAAPILDIKAVASSEHAKFRQMVVRQDGYVGPGI
PIKLSDTPASIRRPPPVLGNLSPDDARA
>gi|319763013|ref|YP_004126950.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MQLALLDAAAKAFTIFGFAAASIDVIASQIGATKGSVYYHYRSKSELFFAVHKRAMVINLRVQMPVLQDK
SLSTIEKLFNMCHRHAMAMMDSLYYQRVTVQGVELHQSISTTPLEREALQEVVAMRDAYEELFEHVLEQG
MSEGVFAALDPSIASKSILGSLNWTTVWYRPREGESAAAKLRIADQLALQAVCGIVAAKSRSRVPTAAAR
LPA
>gi|319763014|ref|YP_004126951.1| electron-transferring-flavoprotein dehydrogenase [Alicycliphilus denitrificans BC]
MTNEEILSAYGPREAMEYDVVIVGGGPAGLSTAIRLKQLAAERGTDVSVVVLEKGSEPGAHILSGAIMDP
RALTELIPDWKERGAPLNQPVTDDAYIFLSETSALRVPNAFLPPFAHNHGNYIVRLGDVTKWLAEQAESL
GVEIFPGFPAAEVLYTDGSENGGVPAVRGVATGNMGLGKDGEPTENFQLGMELLGKYTIFAEGARGHLGK
QLIARYKLDDNRDPQSFGIGVKELWEIDPKKHQPGFVMHTAGWPMDSKTYGGAFLYHLEDNKVALGFVTG
LGYTNPYLSPFEEFQRWKTHPNVRWYFENDKGEITAKRLSYGARAINASGINSLPKTIFPGGALVGCDAG
YLNVSRIKGSHSAIKTGMLAAEAAYEAIQAGRQHDELTAYPKAFEASWLYTELNKDRNFKNWFKYGLATA
TLMNGFEQFVLRGHIPWTLHREKPDHAYLKPAAECKPIVYPKPDGKLTFDRLSSVFISNTNHEENQPAHL
TLKDASVPVAVNLATYAGPEARYCPAGVYEFVPDEAHAGQQRLQINAQNCVHCKTCDIKDPTQNIVWVTP
EGGGGPNYSGM
>gi|319763015|ref|YP_004126952.1| hypothetical protein Alide_2330 [Alicycliphilus denitrificans BC]
MKSLSWAPLGAFALAMAALAPVAHAQQKSVAVTAIVEHPALDSVRDGVQAALKEAGYESGKNLKWQYQSA
QGNTGTAAQIARKFVGDKPDAIVAIATPSAQAVVAATKTVPVVFSAVTDPVAAKLVPNWEPSKTNVTGVS
DLLALDKQMDLVKQVVPNAKRVGMVYNPGEANSVVVVKELEKLLPKLGMTLVEAAAPRSVDVSSAARSLI
GKVDVIYTNTDNNVVSAYESLVKVGQDAKIPLVASDTDSVKRGAIAALGINYRDLGEQTGRMVVRILKGE
KPGDIRPELSTKMELFVNPGAAEKQGVKLSDALIKSAAQVVQ
>gi|319763016|ref|YP_004126953.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MSLFSLLGAVEIGLIFSLVALGVYISFRLLRFPDLTVDGSFPLGGAVCAILISTGTNPWLATLAATAAGA
VAGLLTGWLNVRLKIMDLLASILMMIALYSVNLRIMGGPNVPLINDTTLFTLLQPESIPDYVARPMVLFV
IVVLAKVALDWFFATERGLAIRATGSNARMARAQGINTGAMVLLGMAISNALVGLAGALFAQTQGGSDIS
MGIGTIVIGLAAVIVGESILPSRRIVYATLAVVVGAIVYRFFIAAALNSDFIGLKAQDLNLVTAVLVTVA
LVIPQLKRKLGSRKA
>gi|319763017|ref|YP_004126954.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MLSAQDLFITFNPGTPIETRALRGMSLEIPAGQFVTVIGSNGAGKSTFLNAISGDIGVDTGRIAIDGLDV
TRSPVWERAERVSRVFQDPMAGTCEDLTIEENMALAQQRGTRRGLRGAVKQAERAMYRERLSTLGLGLEN
RLTDRIGLLSGGQRQAVSLLMAALQPSRILLLDEHTAALDPRTADFVLQLTARIVQENKLTTMMVTHSMR
QALDVGERTVMLHQGQVVLDVSGEERARLDVPDLLKMFEKVRGEKLADDALLLG
>gi|319763018|ref|YP_004126955.1| sigma-54 factor interaction domain-containing protein [Alicycliphilus denitrificans BC]
MPWNTSKPSDSVPADVALIERSLLRSFELHRLDPGRGEPPRVLTTTALKDHREPMERFMRIARGGMEALF
GQVRDAGYVVLLADTHGVAVDFIGNPLFDQDWRRAGLWLGSCWTEEKEGTCAVALANLEQRAITVHHAEH
FRAPNKTLTCSAVPIFAPDGRPLAVLDASAMESPDDRRSQHLVLQMVQSAARMAEDANFLHEFEHHHVLK
LARRRDFLEVSADGMVVLDETGRIVAISQSLREQGALVAALGRSVEEVFDYRFEQVADAARQGGYPLAMR
HLPTGTQCFALVRPPRRRPSAAPAQASSAMAGADALQAIAGHDPQMQTNVRQALRVLDKGLAILLHGESG
SGKEAFAKAMHEASARRARPFVAVNCAAIPETLIESELFGYREGAFTGARTKGARGKIAQAHGGTLFLDE
IGDMPQAMQTRLLRVLAEREVTPLGAEQPVAVDVQLICATHRDLRGMVAQGQFRLDLYYRLNSVTLELPA
LRDRADKGLLIERLLREDGQQLYGRAVAITEAARQLLLRHDWPGNIRQLKNVLRTAMALSGGEAVGPEHL
PAEIRGGQPAMLPPERMLSLGGVDAETAVPGAPGGRDALLQALKAHQWNVTETARSLGLCRATVYRHMQR
WEIVSPNRLGH
>gi|319763019|ref|YP_004126956.1| alpha/beta hydrolase fold protein [Alicycliphilus denitrificans BC]
MKLSCRDYPGGGDAGAPLVLLHGLFGSAAQWHHIAAPLSARARVLAVDLRNHGLSPHADAMDYSEMAEDL
RELLDAQGIARARIAGHSMGGKVAMAFALLHPRRTEALAVLDMAPATYHDHFSALVCAALRLDLAAARSR
EDAGRQLERFVPSARLRAMLLQNLAWRDGHLAWRIHWLGIGGSMPQLLGFAPGVLRSSSAVEALFVRGGT
SNYVLPRHENTIRRLFPRSRIVELAQAGHWLHADQPAALVQLLAEWMEGPATGVPPACLVSSIPGPAQAA
SGSMFEPRAGA
>gi|319763020|ref|YP_004126957.1| gluconate 2-dehydrogenase (acceptor) [Alicycliphilus denitrificans BC]
MADQTQFSLHDDSVVVIVGSGAGGGTLANELAQRGVKCVVLEAGKHYTPDDFENDEWAMFNKISWLDKRI
SAGGWHHTQTYPNLPAWIVKGVGGSTVHWSGVALRFQEHDFRTRTTYGAIEGANVLDWPITLAELEPYYD
LAEKKMGVAGSKASGLPPMPPNNHYKVIEAGARKVGYRNIVRPAASNSKVYDGRPACQQIGFCMQGCKIG
AKWSTLYTEVPRAQATGHVELRPESMVLQIQHDKDGRANGVLYVDGKGRRQLQKARVVCVAGNSIESPRL
LLNSASGLFPNGLANSSGQVGRNYMNHATAAAVSIHKGPVYMYRGFDIAAVVADEVPLDTRRGFVGGYYL
EGLALHLPYTAAFMKPGGWGRDFASALEMYDHMSCVWVCGEDLAREQNSITLHPTEKDQYGLPVPIVTKT
YHENDDRITAHGLVQWRKLSEAVGATRVIDMPAYPASHNMGTNRMSAKAGDGVVNKWGQAHDVKNLFISD
GSQFTSSAAANPTLTIVALAIRQAEHIAGAMQRREL
>gi|319763021|ref|YP_004126958.1| hypothetical protein Alide_2336 [Alicycliphilus denitrificans BC]
MKNLNDNLAPGTMRMLDRRPTLQRRSFLRGGGLGAIGIAVIPAAGIAAAKDVAAQQSFRHLGAATGKTLL
RMARDLYPHDKLAESFYVEAVAPYDAAAAKDKGVKTLLTEGVKDLDQRARQRYGVPYAEVKTEDERVALL
KDIEATPFFRKVQGGLVTGLYNNKKLWPLFGYEGSSWQKGGYVNRGFDDIDWL
>gi|319763022|ref|YP_004126959.1| biotin/lipoate a/b protein ligase [Alicycliphilus denitrificans BC]
MTAALPSLTPPEAVREQLWNEQQLAQPVAVPGFRLWRYEAPAIVLGCSQRRLLAQADGEVPVLLRQSGGG
AVLAGPWMLGLSVALPAGHPLARQGLVASYRWLGEAIARVLQQGGVDAQALAPEALRALPAAQRTAVDWA
CFGGLSPWEVLAQGRKIAGLAQVRRASGVLLVGGVLLQPSPWQLMCDALGRGGADARTLAATTVSAAELA
AHFDGQACAQRLGLALQAALEQEACPM
>gi|319763023|ref|YP_004126960.1| dihydrolipoyllysine-residue acetyltransferase [Alicycliphilus denitrificans BC]
MSAAVAEAGAGSASIALKGLRGAIARNMALGWQAPRVAMGAEADVSACRAWLRAQSVGEGDAKPTITACV
LRATALALAAHPRMNALLKDNVVECQGAVHLGLAVALDEGLMVPVIRDAETKPVAQLAQETRALAAGTRA
GQLPPKAYQGATFTVTNLGMTGIDWFTPVLNPPQVGILGVSSVRECAVVRDGQVRVAAMTTLTLVFDHRA
IDGYPAAQFLQAVKAHLEAPDSLSGRP
>gi|319763024|ref|YP_004126961.1| biotin/lipoyl attachment domain-containing protein [Alicycliphilus denitrificans BC]
MSTDIILSQDAWQDVEPGTEALVEDWLVKVGDSVKAGQPVASVVVVKSSHEVLAPADGVIEAILVPAEGT
FKPGQSLGTLA
>gi|319763025|ref|YP_004126962.1| transketolase central region protein [Alicycliphilus denitrificans BC]
MTTRKLTMAQAVSEAIGQEIERNPDVFVMGEDIGKYGGIFGATGGLLARHGKDRIMDTPISETAFIGTAI
GAAAEGMRPIAELMFVDFFGVCMDMIYNHMAKNIYMAGGNIKLPMVLMSAIGGGYNDAAQHSQCLYATFA
HMPGMKVVVPSNAYDAKGLMTQAIRDDNPVVFLYHKGIMGLPWMSYFEGSTNEVPEEQYAIPFGQAKVVR
EGGDVTIVTLSQMVQKSLLAAEQLAQAGIQAEVIDLRTIVPLDREAVLKSVRKTGRLLVADEDYLSFGLS
GEIAALVAENLDSVRLKAPVRRLAVPDVPIPYSRPLEQFVIPQVDAIAAAARQLVAAPQLEGALA
>gi|319763026|ref|YP_004126963.1| pyruvate dehydrogenase (acetyl-transferring) [Alicycliphilus denitrificans BC]
MNPSTERKLWMYEKMIEIREYEETMARVYMEGKLPPHIQKGLAFDIGSGPVPGEMHLAAGQEPVAVGVCA
HLHDDDTVVGSHRPHHFAIAKGVPLNSMTAEMFGKDTGLGRGKGGHMHLFDPAHKFSCSGIIGASMPPAC
GAALAAKKRGKDWVAVAFFGEGATNQGAFHESMNLAALWKLPVLFVCEDNKYAISVEKSESTSVAWNADR
AAAYGMPGVLVDQNDALAVYEAAGVAVERARRGEGPTLIEVKTDRYLGHFQGDPETYRPKGEAAELRKND
PIPRLAEHLRRSGLLDDAADQALRQRVSARIAEAYEYGRSSPYPKPEDALLHVFC
>gi|319763027|ref|YP_004126964.1| transcription regulator asnc-type-like protein [Alicycliphilus denitrificans BC]
MDRLDRKILSVLQANARASLQEIGAAVGLSPSPCWGRIKKMEEAGVIEGYTVRLNPQALDLADTVLVQVT
LDSHSDNTLEKFGEVLASIPEVVEAHLVSGDYDYLLRVVVRDTRDYERLLREKLYKIKGIRHSRSSFVLR
TLKKADLPLLVDR
>gi|319763028|ref|YP_004126965.1| trap dicarboxylate transporter, dctp subunit [Alicycliphilus denitrificans BC]
MQLTKLALGLGLALGITATAFAQTTMRISISVAQNSHQGVAIDTFAKEVEKRTGGRYKIQTFYNGALGGE
RESIEAVQLGTQELAFSSTGPVPNFVPEAKILDVPFLFRDKAHARAVLDGPIGQELLGKFDAKGFKALAW
AENGFRHMTNSKRDVRSPDDLKGLKMRTMENPVHIAAYKAFGIITTPMAFPEVFTALQQGTVDGQENPLP
VIISAKFDQVQKHLSLTGHVYSPCIFLMNKAAFDKLSSADKQAFLDAAKEGAKVNRARVDEDDAKGVADL
RAKGMTVIDNVDKSKFVAALTPVNAQFEKEFGKANLDRIRNYK
>gi|319763029|ref|YP_004126966.1| tripartite ATP-independent periplasmic transporter dctq component [Alicycliphilus denitrificans BC]
MKSLFLTCERWSSAIAMGGACAMLALAATLGMFQILMRFVFEEPAEWTEVLIRFSLIWMVFLAIPMAFRQ
GAMVSVDVLYRWSPPRLRRVLDWVVCLAALALIAIIVWWGWDYARRGGVQSMAGLESVSMFWAYLAMPVG
GLFSVLGIVGNLIDPQRHELETAQ
>gi|319763030|ref|YP_004126967.1| trap dicarboxylate transporter, dctm subunit [Alicycliphilus denitrificans BC]
MTAVMISTMVLCFALTISVAVSIGLASVLGIQASNANMLISVKEMFGAINKFPLAAIPFFILAGNLMETG
GISRRLVDFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGSILIPALIKHGYPTSYAAALQAT
SAELGVIIPPSIPMILYGVSAEVSIGELFIAGFGPGILISGALMLFVWAYCKYKGWGKHDGDGRMPFGRA
LLKAGWALLMPVIILGGIYGGIFTPTEASAVAVFYALVVGMLIYREIGLKDLYAVLRKSALSSAVIMFII
ANAGLFAFLITRAGVPDAIGHWLQEVLKSPAYFLLGVNAALFVIGMFIETSAAIIVLGPILAPVATHFGI
DPVHFGLIMVVNLALGMITPPFGVNLFAACTVARISLDRIVGHLLPFVCVILACLMVITYVPSLSLFLRD
LVYAR
>gi|319763031|ref|YP_004126968.1| metallo-beta-lactamase family protein [Alicycliphilus denitrificans BC]
MEKNTEDAVVDKHGLVLPCGPVPQGGGAKEIAPGVWWIRMSLPFSLDHINLWAIRDGEGWALVDTGIWST
ETAAAWRQLFATVLPQGVTRVFVTHMHPDHIGMAGWLTRKFGCRLWISRLEYLSCRALGADTGREAPDDA
IRFLQRAGWGEEAIETYRTRFGSFGKMVYALPDSYRRLQGGEEITIGGQAWRVVVGSGHSPEHVCLYCPE
RKLFISGDQVLPGISSNVSVFPTEPDANPLADWLASLDKIEREVPDDVLVLPAHNQPFCGLHRRIAALRD
SQHRALDRLREALQEPRRAVDVYGALFSRPVTADNMQMSLATGESLAHLNYLVARAEATVTLGEDGCAWY
QKVPG
>gi|319763032|ref|YP_004126969.1| glycine cleavage system t protein [Alicycliphilus denitrificans BC]
MTASADALLTTPLNALHLELGARMVPFAGYSMPVQYPTGLMAEHLHTREKAGLFDVSHMGQLKLVGPAAA
AALESLMPVDVIGLPVGKQRYGLLLNDEGGIIDDLMFFNQGDDTLFLIVNGACKAGDIAHIQARIGQRCQ
VVTMPDQGLLALQGPQAAAALERLVPGASQLVFMSGGGFDWNGASLFITRSGYTGEDGFEISVPGAQAEQ
FARALLAQPEVKPIGLGARNSLRLEAGLCLYGNDIDATTTPPEAALNWAIQKVRRTGGARAGGFPGADKV
LAQIDDPASLARKRVGLIAKERVPVREPATLENLDGQHIGQVTSGLLSPSLNQPIALAYVQPDYAEAGTE
LFAMVRGKPVPMVVASTPFLPPRYHRG
>gi|319763033|ref|YP_004126970.1| glycine cleavage system h protein [Alicycliphilus denitrificans BC]
MSLKFSKDHEWVDAADANAAVVGITVHAQDALGDVVFVDLPEVGATLAQGDVAGVVESVKAAADVYMPVS
GEIVEVNEALRADPSLANSDPLAAGWFFKVKISNPGELDGLMDETAYGAFAASA
>gi|319763034|ref|YP_004126971.1| glycine dehydrogenase [Alicycliphilus denitrificans BC]
MTAALPLSALENATEFLPRHIGIDAQDEAHMLSAIGEASRRALVDSIVPRSIARAAAMDLPAPCTEAQAL
AELKTIAGRNRLLKSFIGQGYYGTHTPGVILRNILENPAWYTAYTPYQAEISQGRMEALVNFQTMVCDLT
AMPIANASMLDEATAAAEAMTLARRSVKAKGNVFIVSGDCHPQTIEVIQTRAAPLGLAVRIVRSAEEWVA
AINGDDYFAALNQYPASSGWLADWTQSAEAIHAKNAALILAADLLALTLLKAPGEMGADIVVGTTQRFGM
PMGAGGPHAAYMACRDEFKRSMPGRLVGVSVDAHGRPAYRLALQTREQHIRREKATSNICTAQVLPAVIA
SMYAVYHGPEGLTRIARRVARFTAILSRGLDRLGYTARHHGTAFDTLCLKTGDATDAIAARAVSMGANLR
KAWKDYLCISLDETTTRADIKLLWKIFAKDGQQLPTIESMDDGAPSLIPEGLRRTSAFLTHPVFNTHHSE
TGMLRYIRQLSDKDLALDRTMIPLGSCTMKLNATSEMIPITWPEFADVHPFAPADQLAGYAELDALLRRW
LCQATGYAGVSLQPNAGSQGEYAGLLAIKAYHEAQGHAHRNVCLIPSSAHGTNPASAQMVGMQVVVTKCD
ESGNVDMADLRAKCEQHSQDLACVMITYPSTHGVFETQVKELCQIVHQHGGRVYVDGANMNALVGVAAPG
EFGGDVSHLNLHKTFCIPHGGGGPGVGPVCVVEDLAPYLPGHATAGIAGGTGAVSAAPLGNAAVLPISWM
YIRMMGAEGLTAATEAAILSANYISARLKDHYPTLYASANGHVAHECILDLRQLKETSGVMAEDVAKRLI
DYGFHAPTLSFPVANTLMVEPTESETLAEIDRFIDAMIAIREEIRHVENGTWPQDDNPLKNAPHTAESLL
KADWPHPYAREAAAYPVASLRQGKYWAPVGRVDNVYGDRNLFCSCVPVGEPA
>gi|319763035|ref|YP_004126972.1| hypothetical protein Alide_2350 [Alicycliphilus denitrificans BC]
MPHTAEDKQRAITRLRRIRGQAEALERAVEAGSDCAPILQQLAAMRGAVHGLMADLLDSHVRETLAQQPS
PQAVEEMRALLRSYLK
>gi|319763036|ref|YP_004126973.1| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase [Alicycliphilus denitrificans BC]
MKSRAAVAFKAGEPLTIVEIDVAPPKKGEVLIRITHTGVCHTDAFTLSGDDPEGIFPAVLGHEGAGIVVE
CGEGVTSVKPGDHVIPLYTAECGECLFCKSGKTNLCVAVRATQGKGVMPDGTTRFSYNGQPVYHYMGCST
FSEYTVVAEVSLAKVNPQANPEQVCLLGCGVTTGLGAVKNTAKVQEGDTVAVFGLGGIGLAVIQGAKLAK
AGRIIAVDTNRAKFDLARTFGATDCVNPKDFDKPIQQVIVEMTGWGVDHSFECIGNVQVMRAALECAHRG
WGQSVIIGVAGAGQEISTRPFQLVTGRRWLGTAFGGVKGRSELPDMVEDAMAGKIQLKPFVTHTMGLTDI
NLAFDLMHEGKSIRSVVHYAD
>gi|319763037|ref|YP_004126974.1| s-formylglutathione hydrolase [Alicycliphilus denitrificans BC]
MSTAIELLSSHACFGGEQRFYRHASREIGLPMQFSVYLPPRALAGDAAPALLYLAGLTCTEETFMVKAGA
QRLAAELGLALIAPDTSPRGAGVAGEADAWDFGEGAGFYLDATQAPWAAHWRMESWLLRELLPLVAATLP
VDAVRLGIFGHSMGGHGALTLALRHPGRFRSLSTFAPICAPTRCPWGEKAFGGYLGADRAAWATHDATAL
MHSQAAAPYPAGILIDQGLADKFLAEQLHPHLFEAACASVGQPLTLRRHAGYDHGYYFIQSFVDDHLRHH
ARQLAA
>gi|319763038|ref|YP_004126975.1| hypothetical protein Alide_2353 [Alicycliphilus denitrificans BC]
MPDETKPTTTQDGPPQGVPAAARSREGGRIRQWLERVGLALERAEKRIMDGFRVPPHGG
>gi|319763039|ref|YP_004126976.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MRNLNLDQLQTLIAIADLGTFAAAAQALHLAPPTVSLHIKELESRLQADLVVRGRRQAELTQAGKALVEE
GRKLLAASDDLVELVRRRATGLDGLVKVGVSAGVSTRLLPMMLEALSRQSPGVEVRLEAVGSADAMLRLK
AGTLDIGIVASPQPAVAGIRLTPWRNDLMVALLPASWGAPELVTPEWLAGRRWASFAPATQMHGLIAAWF
GQAGFNPRPYLALSYPGALKSLAAASQSAAILPLEEVKDEQHSPDVQIRHLHPPLMRPMAVAHRYSPEPG
RAVSSVLQVLADFAG
>gi|319763040|ref|YP_004126977.1| radical sam domain protein [Alicycliphilus denitrificans BC]
MHEDGILTLPLQAIKGRGAASRMVHRFARDARDAFDDGWDAQADGAGPAAAPRTQVIWEDARSALCSNDS
PDIFFEQSVNPYRGCEHGCVYCYARPTHSYLGLSPGLDFETRIIAKRNIAALLRAELARAGHRPSVVNIG
SATDCYQPVERELLLTRAVIEVMRDARHPFALVTKSSGVERDLDLLAPLARERLAMACVTITTLDAALAR
VLEPRAAAPHRRLRTIRTLAEAGVPVGVSVAPQIPFITEDMEQVLAAARDAGATSAFYTVIRLPWELNPL
MREWLQLHYPQRAERVLARIQDLHGIAEADRRAGKAYDSRRGTRMKGTGLWADLLRQRFEKACARLGLNR
QRTALDLSQYRPALARGQGVLF
>gi|319763041|ref|YP_004126978.1| transcription elongation factor grea/greb domain-containing protein [Alicycliphilus denitrificans BC]
MQRKPHIILSSLDMERIEALLEKQTAPFPGRDALEAELDRADVFDPKDMPPNVVTMNSTVRFTMLESGKT
NTLTLVYPKEMDGSGDKVSIFAPVGIALLGLAVGDEFQMPSPTGQVTVRVDGIEFQPENAGELHR
>gi|319763042|ref|YP_004126979.1| acyltransferase 3 [Alicycliphilus denitrificans BC]
MTQVHRSPLIDCTKGLACAAIVWHHLAFYGPMSDVARQAMPEVIDWLGEYARMAVQVFLVLGGFLAATSL
APRGHARFDDPWPRNARRFVRLVVPYTVALVVAIVVQAAVRPWFDHPSVSEDPTLWQLLAHALLLHGVLG
EESLSAGVWYVAIDFQLFALTTLLLAGVTRLAATLRMRWGGRALARCWPWAMSGGQALVLAGVAASLLHF
NLDAQWDVWAVYFFGAYGLGMLACWAVQSPRAVGAWSWAMLMAALVLAALTLEWRPRIALAGATALALVA
TMRTPALARWTGWAPLNRLGRISYSVFLVHFPVCLLVNAVESHFWPQSIAAAEAGMVLAFALSIAAGHLL
YERVERHVPTWQAALRWQAGLVGTGLLAALLAGLK
>gi|319763043|ref|YP_004126980.1| 2-nitropropane dioxygenase npd [Alicycliphilus denitrificans BC]
MSKLPLALQKLSLPVIGSPLFIISNPRLVIEQCKAGIVGSMPALNARPAAQLEDWLAEITETLAAWDRAH
PDQPSAPFAINQIVHKSNDRLEHDMQVCAKYKVPIVITSLGAREDVNQAVHGWGGIVLHDIINNKFARKA
IEKGADGLIAVAAGAGGHAGVKSPFALVQEIRQWFDGPLALSGSIASGGAILAAQAAGADFAYIGSAFIA
THEARAVDAYKQAIVEGTSDDIVYSNLFTGVHGNYLAPSIRAAGLDPDKLPESDPSKMNFGGDAKKAWKD
IWGCGQGIGSITAVVPAAELIARLRREYQEARQRLALG
>gi|319763044|ref|YP_004126981.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MSYTAPVKDMLFAIEHLARIDQVAQIPGFEDAGLETAAAVLEECAKFNEGVVAPLSVAGDRDPSSFKDGV
VTTTLGFKEAFRQFAEGGWQGLQHPADFGGQGLPKTIGAACGEMLNSANLSFALCPLLTDGAIEALLTAG
SDALKATYLEKLISGQWTGTMNLTEPQAGSDLALVRTRAEPQADGTYKLFGTKIFITYGEHDMAENIVHL
VLARVAGAPEGVKGISLFVVPKFMVHADGSLGARNDVHCVSIEHKLGIKASPTAVLQFGDHGGAVGYLVG
EENRGLEYMFIMMNAARYAVGVQGIAVAERAYQKAVQYAKDRVQSRPVDGSVAGSAAIIHHPDVRRMLMT
MRAYTEGCRGMASVAAAAYDAAHHHPDAQVRKDNAAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFI
EETGAAQYYRDARILTIYEGTTAIQANDLVGRKTARDGGQMARAVAAQIEKTEGELIASGTADAQAVARR
LGAARQAFLDAVDFIAGGAKAHPNDVYAGSVPYLMLAGNLVAGWQLARALLVAQDLSSKGQDAAFMQAKI
ATARFYAEHILVKAPGQRDAIVEGAASVMALPLDTF
>gi|319763045|ref|YP_004126982.1| electron transfer flavoprotein alpha subunit [Alicycliphilus denitrificans BC]
MTALVIAEHDNATIKAATLNTVTAAAACGADVHVLVAGENAQAAAQAAAQIAGVAKVIHADGASLKDGLA
ENLAAQVLQIAGNYSHILFPATAGGKNVAPRVAAKLDVAQISDITKVISADTFERPIYAGNAIATVQSGD
SVKVITVRTTGFDAAPATGGAASVEAIAAVADSGKSRFVGSEIAKSDRPELTAAKIIVSGGRALGSAEKF
NEVITPLADKLGAAIGASRAAVDAGYAPNDLQVGQTGKIVAPQLYIACGISGAIQHLAGMKDSKVIVAIN
KDPEAPIFSVADYGLEADLFQAVPELVKAL
>gi|319763046|ref|YP_004126983.1| electron transfer flavoprotein alpha/beta-subunit [Alicycliphilus denitrificans BC]
MKVLVPVKRVVDYNVKVRVKSDGTGVDIANVKMSMNPFDEIAVEEAVRLKEKGAATEVIAVSCGVAQCQE
TLRTAMAIGADRAILVETDAELQPLAVAKLLKALVDKEQPGLIILGKQAIDDDANQTGQMLAALADLPQA
TFASKVEIAGDKANVTREIDGGLETLALSLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLESVKPEDLGVQ
VAPRLKTLKVAEPPKRGAGIKVPDVATLVAKLRNEAKVI
>gi|319763047|ref|YP_004126984.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MSDLLHVARDARGVVTLTLNDPARFNALGHEMLAALHQALDEVARDESARVVVLAAAGKAFCAGHNLKDM
AQHPDLAWYQDLFARCSRVMLAIHKLPVPVIARVHGMATAAGCQLVAQCDLAVASEAASFATSGIHYGLF
CATPSVPLVRNVPAKRAMEMLLTGDFIDARTALAEGLVNRVAPPEALDAEVQALVRSILQKPRTAVAMGK
ALVYQQRELGIDAAYQIAGQAMATNMMDEAAQEGARAFAEKRQPAWKQS
>gi|319763048|ref|YP_004126985.1| histone deacetylase superfamily [Alicycliphilus denitrificans BC]
MTVSKTGYYTHRDCRKHEMGPGHPECPARLDAIEDRLLVSGVADALEHREAPLASLADIELAHDRMHIAA
LRGLSDMLIEEEDAGGSPLTQLDTDTAMNRYTWTAALRAAGAALEATDAVLAGELENAFCCVRPPGHHAT
RSKAMGFCFFNNVAIAAKYALQRHNLKRVAVVDFDVHHGNGTEDILAGDPRALMVSIFQHPFYPYCGDQD
PAPNMLNVPVPAYTKGMDVRDIVEMMWIPRLEEFKPEMIFISAGFDAHREDDMGQLGLTEQDYAWITMRI
KDVARRFSSKRIVSCLEGGYVMGPLARSVEAHVRVLADL
>gi|319763049|ref|YP_004126986.1| atpase associated with various cellular activities aaa_3 [Alicycliphilus denitrificans BC]
MHAQHKIRSLLDQLNTVITGKSLQIQDCVTCLLAGGHLLIEDVPGVGKTTLAHALARTFGLSFTRVQFTS
DLMPSDLTGVSVYERGTEDFRFHPGPVFTQVLLADEINRASPKTQSALLEAMEEKQVSVEGATRPLPQPF
FVIATQNPYDQLGTFLLPESQLDRFLMRISLGYPDRASERLLLAGGDRRDMLAALPPLLSADELAALQQQ
VLAVHTAGPLLDYVQDLVAATRSGRWFAQGLSPRAGIALVRAAKAQALIEGRDYVAPDDVQAVLPQTIAH
RLQPVGEAGRGSVEQVRAMVESIPLP
>gi|319763050|ref|YP_004126987.1| hypothetical protein Alide_2365 [Alicycliphilus denitrificans BC]
MSSTLDRAARPTAGTQPPAPWAGAKERWRRWWSARLPRTDTLALTQRNIYILPTAAGWMLALTLFVLLVA
SINFQLNLGYLLTFLLAGSAVVGVHLCHATLRGLTLRLLAPEPQFLGAAAPLQVQLNSGARTTRYGIGVA
VRAGAREWAWTDVPAQSSATVQVAFRPERRGLHGVPTLMLETRYPLGTFRVWALWRPAAQVLVYPRPETP
APPLPPGEPLAGAGQAPAHGMGEYDGARAYRRGDPLRLVLWKKAARSMATGTHGLVSRDTQEARRHALWL
DWSATGLAAPEARLSRLTAWVLQADRLGVAYGLRLPGRQIAPDSGAAHRRRCLEALALC
>gi|319763051|ref|YP_004126988.1| transglutaminase domain-containing protein [Alicycliphilus denitrificans BC]
MNLAGRLARLPREARDTLFLLAVVACCIAPLAAHIPPWASAMAATLLAWRGWLAGSGRPLPARWIMAVLL
VLAVLLTLVSHRTIVGRDAGVTLIVMLLALKTLELRARRDAMVVFFLGFFTLLANFFFSQSLPTAAAMLV
ALLGLLTALVNAHMPVGRPPLALAMRTAGRMALLGAPIMVLLFVLFPRMAPLWGMPADKPGARSGLSGQM
RIGSMASLVLDDSVALRVRFDTPGGEPPPPGQLYFRGPVLTAFDGRDWFALSQPEAQAITWARPSPAQLR
VQGPPLRYELTLEPHQRPWLLTLDAAKAAPALPPGQWAQMSPELQWNASRPVTGVLRYRAESHLRFTHGP
LRRTPEMRAYVQLPAGLNPRTLALARQMQADRQLAGGGTQALVDAALQRLRSGGYHYTLDPGVYGDEHTA
DEFWFDRKEGFCEHIASAFVVLMRAMDVPARIVTGYQGGELNAIDGYWTVRQSDAHAWTEVWMEGRGWVR
VDPTGAVSPGRIGQLQRLQARRGVFGTAVGAVVSPMLLQDLRAVWEAVNNGWNQWVLNYTQGRQLDLLRS
LGLQSPGWQDLVRLMGLLVCAAAVIGLGWALWERRRQDPWQRLLQQARQRLARAGLPLPPHLPPRSMAAQ
ARARLGPSAEDAAQWLLRLEQARYAPRPAAALPRLRRELARLRWPAAQSRGTDTP
>gi|319763052|ref|YP_004126989.1| lytic murein transglycosylase b [Alicycliphilus denitrificans BC]
MTSLIVKTIFLIAASALSVSATAKNDHKKHVAKAAPAQHYAQRAEAMRFADDLAERRGLDREWVRQAIGQ
ARLLREVPRLVLPPPRGVPKNWAAYRARFVEPVRIRAGLRFWQDNAEALARAEREYGVPAEIIVGIIGVE
TLYGQHMGGYRVIDALATLSFDFPDAHPRAAERRAFFQRELEQFLTLMDRTGIDPHDPRGSYAGAMGMGQ
FMPSSWTRWAVDFDGDGRIDLWRSAQDAIGSVANYFVGHGWTAGMPTHYAVRFDTAGLQLDELLAPDILP
TFSAAGMAAKGAQVQGEGAHHAGPLALVELQNGADAPSYVAGTENFYAVTRYNWSSYYAMAVIELGRAVA
AQRAVP
>gi|319763053|ref|YP_004126990.1| transketolase central region protein [Alicycliphilus denitrificans BC]
MNTATQKKPRLTTSAMIASIADEGQRVKAAPFGKALVEYAATRPEVVGMTADLAKYTDLHLFAQAYPERF
FQMGMAEQLLMGAAGGMAKTGLVPFATTYAVFGTRRAYDFIHQVIAEENLNVKICCALPGLTTGYGPSHQ
ATEDLAMMRAIPGLTVVDPCDALDIEQAVPQIAEHAGPVYMRLLRGNVPLVLDEYDYRFELGKAKLLRDG
ADVLVISSGLLTMRALEAARQLAGDKVGVAVLHCPTIKPLDAATILAEARRPGRLVVVAENHSAVGGLGE
AVASLLLQEGVTPARFRMLALPDTFLDAGALPTLHDRYGISTAKVAESLKAWLA
>gi|319763054|ref|YP_004126991.1| transketolase domain-containing protein [Alicycliphilus denitrificans BC]
MSNLQHIAQAAWRIRRHAVRMGEVQGQGYVGQALGYADVLATAYAHALDFRPDDPEWDGRDRFLLSHGHY
AIAHYAALIEAGIIAESELETYGSDDSRLPMSGMASYTPGMEMSGGSLGQGLPIAVGMALGLRHRGNPAF
VYNSMSDGELDEGSTWEAALSAAHHGLGNLVCIVDINNQQADGPSSRVMGFEPLADKWAAFGWHVQRVDG
NHLPAVVRAFDTARNLAESRPRVILCDTLMGKGVPFLEARDKNHFIRVEPSEWQQALDALDANRP
>gi|319763055|ref|YP_004126992.1| trap dicarboxylate transporter, dctm subunit [Alicycliphilus denitrificans BC]
MTILIIGLFVVAALASIPIAHALVLASVGGLLIIDRVPVHLAVEQMITQTQSFPLIAIPFFMMTGALMVS
GRLGQSLVNLLSMMIGRVHGGPAQVGVLSSTIFGGVSGSAVADASAIGSMLIPWLKRLGYPAPFAAGTLA
AAATIDILIPPSIPMIVYALVSGASIGALFVAGILPGLLMCGGFMAVCYVQGRRRGFPRDTTPFAWPAFR
QQLLHAGPALAMPVLIVIFLRFGIATPTEVSVMSTLYALVVSGLVYRDLTVAKLKAAAVEAGISTGVVLL
IIMASSVVGWIVTYEQLPAAFTQYAKETLQSPWLIILAMNLIMLATGMFIDLPAAVLLLTPMFVPLASAV
GMDTVQLGIMMIVNLSIGLYHPPIGTTLFITSSIAKVRIGDVVKELIPFYVVALVLLLGFAYLPWLTLH
>gi|319763056|ref|YP_004126993.1| tripartite ATP-independent periplasmic transporter dctq component [Alicycliphilus denitrificans BC]
MNSLLRAVDAVIAWWCHAVLYVTMSVVFVILSVNVVLRYVAGTSLAWASELPELMFPWMIMAGVVLAAQH
GSHIAVVLLTQRLGAARRWVLTAGALVVVALYLGLSWAAWPVFEIAADELTPIMQVPGSVSVGCLLLGFV
MLTIVTLCRLPQIWSGQAHDEIGADA
>gi|319763057|ref|YP_004126994.1| trap dicarboxylate transporter, dctp subunit [Alicycliphilus denitrificans BC]
MQRTPLLRRTLLAAILAAGASLASAQAVKLTLAHGNPPDNPRHVAAVKFAEAVKAKTQGRIEIQVAHSAQ
LGDDAAMVTALRSGTLDFSANSQGAVAAVVPEYAALGMPFLFADVQKAWSVMDGPIGKELADKSAAKGMV
LLGLWDNGVRQMSNSKRPIKAPADMKGLKMRTPPDAVTVDIMHAMGADAQQIKFSELYVALQQGVVDGQE
NPLTNIVSAKLYEVQKYISLTGHKYESTPFLMSKRTWDRMAPADRQAVTEAAAEATQLQRQLNKEIDDKL
VAELKAKGVQVDAVDRAAFVEATKPVYTKWLASPIGAFVGRVQQASR
>gi|319763058|ref|YP_004126995.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MLLKDKVAVITGGAGINGLGFATARMMAEQGARVAILDLAAADPQAAAARLGDGHMGVVANVTDKASCEA
AAAAVQARYGRIDILVNNAGVTQPAKFLDITGADYDRILDVSLRGTLYASQAVLPAMLAQQSGAIVCISS
VSAQRGGGILGGPHYSAAKAGVLGLARAMAREYGGSNIRVNCVTPGLIATDINKGKIPDDKRQGILDGIP
LARIGEPADVAGCVVFLASDLAKYCTGVTLDVNGGMLIH
>gi|319763059|ref|YP_004126996.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MIPPLSALQAFEAVARRRSFSLAATELHLTPSAISHQLAKLENLLGVRLFERSSRGVDLTPAGHSYLQRV
GNALGAISTATDALRHGVQDSLYLHCSPSFASLWLMPRIARFAQRNPGISLVLSASHVHSDFQLGLVDLD
IRYGLPTWPHLEVEPIFSEKVLPLASPEFIRRHALHTPQDLLQVPLIQSMINVAQWPEWFARFEPAHRPE
RIALKFDRAMMSLDAAVQSLGVALESACLGQAHIASGRLQPVFGDEMSLEVQAHFLVYPARHAARPEVRM
FLDWIREEARAC
>gi|319763060|ref|YP_004126997.1| transketolase [Alicycliphilus denitrificans BC]
MSAHPLQPLAHAIRFLSIDAIVRAAEGHQGVPLGMAEIATALYTGHLKFDPADPAWWDRDRVVLSNGHGS
MLLYALLHLTGYEQIGLDQIQRFRELGSRCEGHPERNPAHGIEVTTGPLGQGIANAFGMAVAEAYLSARF
GSGLVDHFTYAFVGDGCLQEGVGQEMISLAGHLRLGKLVLLWDDNRITDDGSTQLSISEDVAARFRVAGW
HVAEVDGHDIDAVSAALALARKDERPSFIACRTTIAKGIPRLEGQRGGHSARLYEQDAQEARALLGWPHG
PFEVPAPVLDAWRAAGRRGAGARVAWRQRLDALPDAERREFCRVMNGELPAGWQQVLRDYKQRAVAAPQE
TGGILISAEINELLAPVIPERMVGCADLEAPTSHKRSLAAFTATDRSGAYVHCGVREHVMGAMANGMAAH
GGIVPLTVTYLAFSDYERPAMRMAALMGLPVKFVFSHDSIGIGKNGPTHQPVEILASLRAMPNMLVMRPA
DAVEAAECWEAAMAHATGPVSLVFARQNLPLVRTAHAPENLSARGGYVLREAACGARQVTLLATGSEVAL
ALAAREALEQAGIATAVVSLPCWELFDQQDAAYRREVLGSGVRVGVEAACRLGWDAYLGDRGGFVGMTGF
GASGPADALYKLFDITPEAVAREARRLLAA
>gi|319763061|ref|YP_004126998.1| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MKIIFLDRETISPRTHVRRPAFDHEWVEYPRTGPAEAAERLRDADVAIVNKVRLTADVLAQAPRLRLIAV
AATGTDNIDLAACQARGIVVSNIRGYATHTVPEHTFALIFALRRSICAYRDAVRAGRWQQADQFCFFDHP
IRDLAGSTLGVVGDGALGQSVAAMGRALGMRVLISGHKGRTGQGRLYTPFEQTLQQADVLTLHCPLNEHT
RNMIAAPEFAQMERSPLLVNTARGGLVDESAVGPALDAGQISGAAFDVTSVEPPPADHPFMALLDRPNFI
LTPHVAWASAEAIQALADQLIDNIEAFVASRPTNVVEPRA
>gi|319763062|ref|YP_004126999.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MLHLSLRQIEIFNAVAQSGSTVAAAQVVALSQSATSAALQQLEQCLGAPLFERVGRGLVLNDAGRALLPQ
ALALLEQARAIEQAFGAQGAGLSVRLRVAASTTIGSYVLPHVLAAFARSHPQVSVDLQIGNTREVAQAVQ
ALDADLGLIEGASHWQGLQVRPWRRDELVIVAAPHDPLAQAARARPLGPAALRGARWLLREQGSGTREMV
EHALLPRLHQLPSAATLGSSEAIARCVAQGLGISCLSRVLVQPLLDAGELVLLPTLLPRIWRHFSLLQRM
GQQHSPALAAFVQACQTHAQGEPA
>gi|319763063|ref|YP_004127000.1| uncharacterized protein family upf0324 [Alicycliphilus denitrificans BC]
MTLASHPSSTLASLTGSPVRWLPGLLLIGAMAAAALWLAGQPFFARHGLGMLTLAIVLGLLLGNTVYPRL
DQACGPGVGLAKQQLLRAGIVLYGLRLTFQDIAVMGWGGVAVDALVLASTFGLASWLGQRVLGLDRRTTL
LVGAGSSICGAAAVLATAPVVKGRAQDVAVAVATVVVFGTLGMFLYPALYHWNASWDWIDMNAQQYGLYV
GATVHEVAQVVAAGAAIGPEAAATAVIAKMTRVMMLAPFLLVLSFFLARARHGAAAGQKDAGQKDAGGSR
AITIPWFALGFVAMAGVNSLDMLPDAVVRAGVRLDDLLLAMAMAALGLTTHVRAVRAAGLRPLLLAAALF
AWLLGAGLLLSRYLPQWP
>gi|319763064|ref|YP_004127001.1| abc-type branched-chain amino acid transporter family periplasmic ligand binding subunit [Alicycliphilus denitrificans BC]
MSLPSRRQAIRACALALLPLAVGAQPRSATGAPIRVALIESLSGSFANTGEAVFRNIVWAMERVNARGGV
PLPGGAKPLQLARYDSKGTNEEALSALRAAIDDGAHFVLQGNSSATAAALIEAINKHNQREPGRRVVFLN
YSAVDPALTNDKCSFWHFRFDAHADMRMAALMDVMREDRALKSVYLIGQDYSFGQAVLREARRQLAAQRP
DVAVVGDELHPVGRVKDFAPYAVKIKASGAQAVITGNWGNDLTLLVKAAREVGYDGMFYTFYGNALGAPA
ALGDAGVGKVVAVADWLPNLPTKGSEDFYRAFRARFPQPQDDYVHMRMQLMVEALAQAMQQAGSTDALPV
ARALEHASVTLYGQAGRMRAQDHQFQQPLVVGVMDRLGAPGVKFDVEGSGYGFRVVRQIPADKAQMPSTC
RMQRP
>gi|319763065|ref|YP_004127002.1| hypothetical protein Alide_2380 [Alicycliphilus denitrificans BC]
MAPVIRFLPLPSTPLGRRLGLLACALLLAGCARLPEAMPGLERNLQFTPNDFDSTSMHTRHVLASQARTC
EAARRALLSQGYLVNTASAEMVAGRKYYQPQADVHYEVEMRVVCAPEGQGDVRTSAFASALQDRYVIKKV
NNSASLGVGGIGSVSLPVSATDDTLVKVGSETITDVQFYERFFQLFERYVPMAPAGTASVQLPVPVATAP
APAPAPATTAAVPEPAASASQLPQQERAAAADAPAEQPAPQSIEQLMAQ
>gi|319763066|ref|YP_004127003.1| hypothetical protein Alide_2381 [Alicycliphilus denitrificans BC]
MMLLNSLLLALRSIRRNLMRSFLTVLGIVIGVSAVITMVTLGNGATLAVQAQIASLGTNLLQVRPGQRMG
PGGGSGAPAFKDVDADAIAQQIGGILAVAPEARTSATAVAGGRNWTTSVLGSTNAWLQTGSWTLASGREF
TSDEQRVGAAVCLIGQTVRRELFGAGADVLGERVRVRQFSCEVVGVLASKGQGAFGNDQDDLVLLPLKTL
QRRVIGSTRVPTLLVSMQDGSDPERVKSSLTELLRERRKLSESDDDNFNVLDTKQLADTFSGTTRVMTTL
LGAVAAVSLLVGGIGIMNIMLVSVTERTREIGLRLAIGALEREVLMQFLIEAVVLAALGGLIGIVLAAGA
SVALSKAMGIPYVFHPGVNLLSFVFSAGIGVLFGFFPARRAARLDPIEALRHE
>gi|319763067|ref|YP_004127004.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MNAPMGALADAQPLIRLRGITKVYGEGALAFQALKGVDLDIAGGEFVAIMGPSGSGKSTAMNVIGCLDRP
SVGSYLFRGVPVQSLSRDDRARLRRRFMGFVFQGFNLLARTSAQENVELPLLYRGESAAARHAAAARALE
SVGLKGWEHHTPAELSGGQQQRVAIARAIVSEPAVLLADEPTGNLDTQRSREIMELLWRLNAEQGITVLM
VTHEPEMAQYARRIVRFVDGRIDSDTRNPRPYALAQEAMAP
>gi|319763068|ref|YP_004127005.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus denitrificans BC]
MTEKRTTNPAAPAAQDLQSLLGDGLGRRWWQSITLWLAVLALAAAAGGWWYWQAGKRAKAAPRYVTQPVQ
RGQVKLTVAANGTLQPTRSVNIGSELSGTVRRVLVDVNDAVKKGQVLVELDTTKLEAQVLRSRASVASAQ
ARLAQAAATVKEARASLARLEEVARLSGGKVPSAAELDTGRAAYDRALADEAAAHASVQDARAALATDET
NVTKASIRSPIDGVVLSRAVEPGNAVAASLQAVTLLTLAEDLSRLRLEVSVDEADVGAVQPGQQASFTVS
AYPSRPYPARTTRVAFGSTKTDNVVTYITYLEVDNADLSLRPGMTAAATITSTERNDVLTVPNTALRFTP
VAAAGAAAPGPAASGDKAGGGIMGQLMPRMPRSAGQRRGEGGAKGGAALRQIWVLEDGAPRAIHVKVGIS
DGRVTEVESDALQPGMQVITDQLAAGARS
>gi|319763069|ref|YP_004127006.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC]
MCAPLLAALVLAGCATRLPPAPDGSVPVPGAWAGQGAVQAPAARPADDLTQWWQQLGDAQLTGLVTQALQ
AHTSVRSARAAVEQARAQRDVQAAGMLPSLDASGSAQRSRSNGATGNSFQLGLDASWEPDLFGRIASGVR
AGEADLLAAEAGVAAAQVALAAEVAVNYISLRSQQQRLQIAESNLAAQRETAQITGWRVQAGLASAVAEQ
QARTIVEQTAAQLPALQAGMAQARHALAVLTGQPPAALDQALAASAPVPQAPAELALAFPADTLRQRPDV
RQAELGVRAAWERVAQAEAQRLPSLRLGGTLGLKALSLGALTGGGATAASLLASVSLPVFDGGALRAQVR
AQEAALEQARVGYEAAVLGALKDVEDALVALQGDRERLARLEAAAEAAGNAALLAQHQYASGLVDFQTVL
DTQRTLLTAQDGVAGTVASASTNHVRLYKALGGGWQAPREAGPQGQEP
>gi|319763070|ref|YP_004127007.1| metalloendopeptidase, glycoprotease family [Alicycliphilus denitrificans BC]
MSLLILGIESSCDETGVALVRGRGGDAVPTLLAHALHSQIAMHQDYGGVVPELASRDHIRRVLPLTEAVL
AEAGQRLADVDVVAYTRGPGLAGALLVGAGVACALGAALDRPVLGVHHLEGHLLSPFLSSDPPEFPFVAL
LVSGGHTQLMRVDGVGRYEILGETIDDAAGEAFDKSAKLLGLGYPGGPALSRLAEQGDAKAFKLPRPLLH
SGDLDFSFAGLKTAVLTQAKKLGDELAARKADLAASTQAAIVEVLVRKTLAAIDQTGMRRVVVAGGVGAN
RLLREQLDAACAARRVRVHYPELHLCTDNGAMIAMAAAMRLQSGQQQANRNYAFDVKPRWPLDAIAS
>gi|319763071|ref|YP_004127008.1| cbs domain containing protein [Alicycliphilus denitrificans BC]
MTTVAEILKSKPDAQVHCVAPSDTVLAALRLMAEKHIGALLVMEGEQIAGIFTERDYARKVVLLGRASVD
TPVREVMTRAVRFVHPSHSAEQCMALMTENRLRHLPVVDEGRVVGLVSIGDLVKSVISEQQFIITEMERY
ITGAR
>gi|319763072|ref|YP_004127009.1| calcium-binding ef-hand-containing protein [Alicycliphilus denitrificans BC]
MNTPDSTPLLAEQLMQQLQGAPLQDISRQLGTGHAETQSAVAMALPMLLGALGRNAQDAQGAESLFGALQ
RDHMPAAPQPAMDLGGLLGSLLGGGGAAPGGDAGAAILGHIFGGSRERAESALGQSTGQGVDAGRLLQML
APIVMSFLAQRVSSSGMDAGGLGQMLGQERARAQRTGTPGGDLLGSLLDQDGDGQVGLGDLVKIGANLLG
GRR
>gi|319763073|ref|YP_004127010.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus denitrificans BC]
MTSAICDSPALVPASPPRTVPFPGLACILALSLLLAACGDKNAKPAAAEQPPEVGVVTLQPERRVVTTEL
PGRTTAFLSAEIRPQVGGIVQKRLFTEGARVAAGQVLYQLDPAPYEVALASAEAQLARARATLNTARTNA
RRNAELVKIDAVSRQVYDDSQAAVAQAQADAGVAAAAVEAARINLGYTRIKSPIAGLTTTSAVTPGALVT
ANQAAALTTVSQIDPLYVDVTQSSSEVLRLKGDLAAGRFKREGKGDARVAIKLDDGSTYAQEAVLRFSGV
QVNPATGAITLRAVVPNPDGLLMPGMYVRAVLEAGVNEQTLLAPQQAVTRDPAGNPSVLVVTPENKVERR
RIATGAAVGNRWEVLSGLAAGERVLVDGAQRARPGDTVRPVPWAPKARQGTSAQASQPAPQP
>gi|319763074|ref|YP_004127011.1| transporter, hydrophobe/amphiphile efflux-1 (hae1) family [Alicycliphilus denitrificans BC]
MAQFFINRPVFAWVLSIVIMLAGGLSIFTLPLEMYPEIAPPRVTLNTTYTGASAETVENSVTQVIEQQLK
GLDRLLYMSSTSDSAGRSRTTLTFAPGANIDVAQVQAQNKLQGAMNRLPDAVKSRGVFVNKGGQDYLVTY
VFTSPDPNVSQVTIGDYLTSNVVDVIARVDGVGDVTVFGTNYAMRIWMDPALMEKYALMPSDLVNALNAQ
NAQVSAGQLGTLPAVPGQMLNATVTARSKLTSVQEFKDIVLKSAPDGSVVTMADVARVELAADSLTVRSI
LNGQPGAGLGIVLADGANAMQVADAVARKIAELAPYFPDGITGFVSSDTTPFVRASIKEVIKTLGEAMVL
VTLVMFLFLQNFRATLIPAIAVPVVLLGTLGVLSAMGYSINMLTMFALVLAIGLLVDDAIVVVENVERVM
SEQGLPPKEATRKSMKEITPALVGIGLTLSAVFVPMAFFAGSVGVIYRQFSITIVAAMGLSVFVALTLTP
ALCASLLKPMAHERTVRRGPLGWVDRFFIWFNHHFDRSATRYQGTVARLLRRAGRMMVLFGAVLAAVAFM
FHRLPTSFLPNEDQGFVGATVTLPSGATDARLMEVMDQIRLYFKDKPEVFSTNAILGNNGNQSSGNMWIR
LTPWDKRPLPSQSAEAIANQATKDLASIRDARVFVTLPPAVRGLGSSAGINFVLKDLNGLGHDALMKAMN
DVIAASRKEPAIINMRTTGFDDTSELKVEIDDRKAAALGVSVADINGVLSSALGGTYVNDFVHYGRVKRV
YIQGDAPSRMLPQDIAQWSVRNRDGQMVRFSAFATTSWGNGSPQLMRYNGSPALEMQANTPPGASSGDAM
AAVERIMATMPPGIGFEWTGASLQERQSGSQAPMLYAVSILFVFLCLAALYESWSVPFSVMLAVPLGVIG
ALAATYGRGLANDVYFQVGLLTTVGLASKNAILIVEFAVQLQERGRSLIDATVEAVRLRLRPILMTSLAF
GFGVLPLAIGTGAGAGGRRAIGTAVLGGMVFSTLLGIFFVPVFFLIVRRLFTSRGAPAHTPQPEAAP
>gi|319763075|ref|YP_004127012.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC]
MIPRRALLAAPLALAACTSLAPDYQAPALPVPPTMGAAQPPIAAQAPDPAHEATLHVTEAGPLPWSDFVQ
EPRLREVVALALAHNRDLRMAALAIERARAQYGIERSALFPAVNATGAGARSRTADDLTTAGRPNTTGQY
SAQLGFSSYELDFFGRVRSLNDAALQEFFRVAENRRSVQLSLVAEVMNAWLMLDADARRLQLARETLRTR
QQALDLTRRSFELGATSALALAQAQTSADTARVDAAAFASQVARDRNVLALLAGTSVPDALLPASVASVL
PGAGKVPELLPPPAPATALLGVAADLPSSVLLHRPDLRAAEHALRGSYASIGAARAAFFPSITLTASVGT
ASNALSGLFGAGNGTWTFAPQIRLPIFDAGRNQANLRVAEVARDTALAQYEKAIQTAFREVADTLAERAT
LDERLDAQRSLVQASQRALELSDARFRLGADNYLAVLDAQRSLYAAQQAQIALQLAEQVNRVTLYKVLGG
QWAGDAAPPDSS
>gi|319763076|ref|YP_004127013.1| nitrite reductase (nad(p)h), large subunit [Alicycliphilus denitrificans BC]
MVKQSRLVMVGNGMAGVRTLEELLKIAPDLYDITVFGAEPHPNYNRILLSPVLAGEQTVDEIVLNDWSWY
QEHGIALHAGHTVTAVDRARRLVHARGPGGEAVSAPYDRLILATGSNPFMLPIPGKDLAGVLAYRDIADT
QAMIDAAAKYRSAVVIGGGLLGLEAANGLMKRGMQVTVVHAGEWLMERQLDPVAGRMLQKALQERGMRFL
MQAQTQELLGDGDGRVRAVRFKDGSEAPADLVVMAVGIRPNTALAESMRLHVERGIVVHDTLQTTTDARI
YAVGECAAHRGVAYGLVAPLFEQAKVLANHLAEFGIGRYLGSQTSTKLKVTGIDLFSAGDFQGGEGTEEI
VMSDPGAGHYKKLVLKDDRLVGACLYGNTVDGGWYFKLLRDGRAVADIRDRLMFGESNIGEGGHAGQSQA
AAMPDEAEVCGCNGVTKGAICKAIKEKGLFTLDEVRKHTKASASCGSCTGLVEQILMATAGGDYSATPKT
KPLCACTEHGHQAVRDAIRTNHLLSKEEVFAFMEWKTPDGCPSCRPAVNYYLISTWPKEALDDPQSRAIN
ERSHANIQKDGTYSVVPRMWGGETSAAELRRIADVVDKYGIPTVKVTGGQRIDLLGVKKEDLQAVWRDIG
MPCGHAYGKSLRTVKTCVGSEWCRFGTQDSSALGRDLERALWRMYAPHKVKLAVSGCPRNCAESGIKDVG
VIGVDSGWEIYVAGNGGIKTEVAQFFTKVKTAGEVLEVSGAFLQLYREEGWYLERTVHYVGRVGLDYVKK
RVLDDAAGRQALWTRLQSALEGEPDPWFEGGKARVDARQFIPIAVA
>gi|319763077|ref|YP_004127014.1| nitrite reductase (nad(p)h), small subunit [Alicycliphilus denitrificans BC]
MTNWKYICQVQDIPRQGARRVARPRGLEVALFRTAGDEVFALLDRCPHKGGPLSQGTVFGKSVACPLHNW
TIGLCNGQAAAPDEGCTPAFQVKVEGGAVFLDADELAGRALHETRPLAGPALHCA
>gi|319763078|ref|YP_004127015.1| molybdopterin oxidoreductase [Alicycliphilus denitrificans BC]
MTRHTRSTCPYCGVGCGVLIESEAGRITGVRGDPGHPANFGRLCSKGATLHLTARPEVQEQVRLLQPLRR
AARGAAAQPIAWDTALDTLAQRIAATVRQHGPDAVGLYVSGQLLTEDYYAFNKFAKGLLGTNNIDTNSRL
CMSSAVAGYKATLGADAPPACYEDIAQASTLFIAGANPAWAHPILFRRIEDARRANPALKIIVCDPRRTD
SAALADLHLALRPGSDLWLLHGMLRCMVEQGWTDPAYIAAHTSGWTALQAQVAQATPEAVWQHCGIAPAD
LLQAARWFAGVEGGSGPRRPTLSLYCQGLNQSARGTDNNAALIHLHLACGQIGKPGAGPFSLTGQPNAMG
GREVGALANQLSAHRNLADPRHRAEVATLWGVPEVPAAPGKAAVEMFEAAAEGHIKLLWIACTNPAHSLP
DQTLVRRALQRAEFVVVQDAYAGVATARFADLLLPAATWGEKEGTVTNSERRISRVRAAVPAPGQAWADW
RIVTQVARRLQPLLPQRAALPGLFPYEGPEAIWNEHRESTRGRDLDITGLDWALLEAAPRQWPCPTGQAE
GTARLYADGRFATADARARFVPQQPGGVAEPTDARYPLALLTGRLRDQWHGMSRSGTVESLWAHAGEPVA
QMHAADMARLGLRDGDLAYLTSRRGSIVAPARASDELASGQVFLPMHWGDEVLGGASSTGRRLAGVNALT
TAARCPQSLQPELKHAAIKVLKAELPWSLWAQAWLPLAQVHRAREALQSLMDAFPFASCSLFGRPGTGTG
LQLRAGAHHAPDEALVERIAGLLDLQGAGLLSYRDARRGQWRRARLQDADGAQRLQAVLLAGDASAQAWI
APLLQERHDAQPLRRALLQPGAKAPQALATRGATVCACEGVAENAIADLLRSCTGDAAQRLQRLKNELRC
GTQCGSCVPQLQRMVQASLA
>gi|319763079|ref|YP_004127016.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MAPPRSFLKSGHLPTLLASFLYFDFCFAVWVLNGAMAPFISEAYQLSAAQKGFMISVPILAGALMRFPLG
VLAQYIGRKNAAMVEMGLIMAALALGFFFIRGYDHVIAMGVLLGIAGASFGVALSLGSGWYPPQHKGLAM
GIAGAGNSGTVLAVLLAPPLAQAYGWQTVYGLAGLCMLLPFTVMAVFAKEPPDHEKQSLRQHVACLFEKD
GWTFSLLYVVTFGGFIGLASFLPTYFHDQFGVSKVQAGQLTMLAAVMGSGLRVAGGYLADRLGGIHTLTG
VLILVAATLVACGLAEGQLTATTLLFMLCFAALGAGNGALFQLVPLRWPLTTAVAGSMIGEIGALGGGLV
PNAMGLSRQYLGSYLWGFIALALLALAMLAVLRLMQPRWTRTWSRPGGRAPAPVPAA
>gi|319763080|ref|YP_004127017.1| snare associated golgi protein-like protein [Alicycliphilus denitrificans BC]
MTVVELIQSYGYLAVAAGTFLEGETVLLVAGAAASRGHLWLPAVVAVAALAGFAGDQLYFFLGRRHGARL
LERFPSLQARTAHARALLERHDLPVILSIRFLYGLRIAGPLAMGMSGVPWLRFFLLNGAGALVWALAVAS
VGYGFGHALAHWLAAIDADELWALAAALLLGLAWWLVTRRRHGAIASRQRD
>gi|319763081|ref|YP_004127018.1| glycosyl transferase, family 3-like protein [Alicycliphilus denitrificans BC]
MPENMRIVPAHTTMGISHYIKEIGRGARGAKALDRTQAADLFGQVLDGRVTDLEVGAFCVAMRIKGETVD
EMCGFLDAVHTRIAAFPACADGQPLIVLPSYNGARRLPVLTPLLALLLAREGQSVLLHGMRTEARRVLAS
DVLEALDIPALAAPEEIAHGSVAHISTAALLPGLARLLSVREAIGLRTPAHSVAKLVAPCAGPALVVASY
THPEYFELLGATFGALGAHALLSRGLEGEVAADPRRQPRYDAFVAGTHQLLQEQQPGTADEVPGLPAEID
VASTAAYTRRVLAGQAPVPAPLQQQVRHIVHLACQITARGRP
>gi|319763082|ref|YP_004127019.1| uroporphyrin-iii c-methyltransferase [Alicycliphilus denitrificans BC]
MTAPSANGSCTLVGAGPGDPELLTLKALKAIQAATVLLVDDLVSDAILALAPPGARIVYVGKRGGCKSTP
QAHIEALMVAAVREGETVVRLKGGDPFIFGRGGEEVQHLAGAGIAVQVVNGITAGLAGMTLLGAPLTHRR
HAHGVVFITGHNHPGEAGTDWRRLGATARDARLTLVIYMGIASCARIQRELLDALPAHTPAAVIQHVSLP
QQRHAVTTLGALQETIARERLASPSVIVIGDVVRGIDAAQAGARPA
>gi|319763083|ref|YP_004127020.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MNLPAHQLSMTVLMSPDMANFSGNVHGGAILKLLDQVAYACASRYSGRYVVTLSVDQVTFLQPIHVGELV
TFLASVNHTGKSSMEIGIKVVAEDIRTQVVRHVNSCFFSMVAVDDAGRSTPVPPLAPTGHDERRRWEAAL
LRKALRREQAQRFEEIRQAGQAAGAGG
>gi|319763084|ref|YP_004127021.1| hi0933 family protein [Alicycliphilus denitrificans BC]
MAGFARQDSHPVSTPFFDAVIIGAGAAGLFCAAQAGQRGLRVLLVDHAEKVAEKIRISGGGRCNFTNRDL
DPRAPQRHFLGQNPQFCRSALSRYTPQDFIALVQRHGIAFHEKHKGQLFADRSAEDIIAMLLAECADGRV
QRWQPCGVKKIALLASSAQGAGASSYQIDTDRGPVQARSLVVATGGLSIPKIGASDFGYRVARQFGLPLV
QQRPGLVPLTFDGADWAPYARLAGLALPVEIGTGAGKERTVFHEDLLFTHRGLSGPAVLQISSYWQDGAP
IDIDLAPGIDLPAALAQAKARSRKRVANELATLVPSRLADAWAGTDADWQRPINEASDKALARLAAQLAR
WQLTPTGTEGYKKAEVTLGGVDTRALSQQTMECRAQPGLYFIGEVVDITGWLGGYNFQWAWSSAHACAQA
LPMD
>gi|319763085|ref|YP_004127022.1| nnrs family protein [Alicycliphilus denitrificans BC]
MPQPLPPLMSISDKAQPAAAPLKGWPLLRLGFRPFYLGTALLACLSVPLWIAIFLGHMQMQLEMPPLLWH
GHEMLFGFAAGVVVGFLLTAVKAWTGLETARGPLLGSLILLWLAARVAALVAPYPVFAALDMALLPAAAA
ILLRVLLKAGNKRNIPLISLLVLMAIANLAFHLSVLGAIAVPAVVALYAELALIIMVVCVMTGRVVPMFT
KNVTPGLVINVPRKFELTLLAVTAIALALWVLPTPAPLVLVASLAAAVLHAARLWMWHPRVTLKRPILWI
LHASYAWLPIGFALLALAQLGWVNPSLAVHALAVGVIGGLIIGMVTRTARGHTGRPLQASRGEVAAYALV
MLAAVLRVLVPAVQPGWYAYALEGAACLWAIAFAIYLFIYTPWLTRTRLDGKDG
>gi|319763086|ref|YP_004127023.1| hypothetical protein Alide_2401 [Alicycliphilus denitrificans BC]
MSNAASVIDVRTIAPFERHARIFGQLDALAAGQALQIVNDHDPVPLHMQLEGRAPGQFQWTYLQSGPDLW
QIEITKKATAQAEDSCCSGGACCG
>gi|319763087|ref|YP_004127024.1| hypothetical protein Alide_2402 [Alicycliphilus denitrificans BC]
MTQKNYVTRRAVVLTGVLAAVCGLAGNNARAEEWPTKTIKVLVPYVAGGPVDSVTRMLMEIVSKSVEQPI
IIENKPGANTVIATAQLARSAPDGYTFGVVPAAYTTNQVLSKNLQYKPSDLAPVSHMVNIPLVLFASVST
PANSVKEFAAWAQTRPVSYASTGPGSTGHLLGEIFSLAAGLKATHVGYNGSAQAMPDLMGGRVDYFFDPA
TGGMPHVKAGKLKALAVSAQQRCDCAPDVPTMAESGYPEIVQGSWIGLMAPAKTPRNVLDRFSAEVAKAV
QSPEFAKKLKVLGFGPVGSTPEQFQALIDRDVAAYADIARKADIRLDR
>gi|319763088|ref|YP_004127025.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MVSITASVAWWARTEPQRLALVYGDQRLSYGDLQQRVERAAALLHARGIRPGAVVALLMKNSAAFLELSL
AIGHIGAVLLPVNYRLGADEVGYIASHAGVQLLFADEELRPAVPDGIPVVWVDAPAQADSRRLAAPADAR
VPDAHPAQVNDLYRLMYTSGTTDRPKGVMHTYGNMAWKCLDHLCALGIGKEDKLLVVGPLYHVGAYDLPG
VALWMAGGALVLERDFDADRALALIASERITGAWMAPVMLNRCLASPERAAYDLSSLRWLVGGGERTPEE
RIREFSSVFAHARYIDAYGLTETCSGDTMMEAGRELEKIGSTGRPLAHVALAIMDDEGNALPAGSQGEVC
LCGPKVTQGYWRDEAKTRAGFFGQWFRTGDVGYLDAEGFLYLTDRKKDMIISGGENIASSEVERVVYGLP
QVAEVAVIGLPDAQWGECVAAAVVLKPGQSLSLEQLRAHCSGKLGNFKTPKRLVICDALPRNPSGKVLKR
ELRLRLAEMK
>gi|319763089|ref|YP_004127026.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDFRLNDEQRMMIETARQIGEGFGLEYWRKHDADKAFPKAYWKAVCDAGLAGVALPEEHGGSGLGMMEMT
LIVEALSATGGGSTVGQLFMVNPIFGGVSISRFGNDKMKKELLPKIISGDMNFCMALTEPDAGTNTLEIK
TFAAADGDGWRLNGRKIWITGVESADKMLVIARTKKLQDAESRTDGLTMFMIDVKREGLSHTPIDKLGTC
TLDSSSVFFDNVRVEPDELVGTLHKGWRELLDVLNTERMVTTAGLVGTGELAIRLAVDYANDRKVFGNRP
ISAYQGLQFPLAQCHVEVESARLLNYKAATNFDMGLPYSNEANAAKLIAAQAVARATERAMQTMGGMGYA
KEFHVERLWRDCRLFRFAPVSEEMLLNYVANHELKMPKGY
>gi|319763090|ref|YP_004127027.1| hypothetical protein Alide_2405 [Alicycliphilus denitrificans BC]
MTFSRRSFTLAVAAVAALGTSAQAQSIPAGKQMRIIVPYSAGGTSDILGRKLAQQLGERLGRQVIVDNKA
GAGGSIGTEATVRADADGTTILLHSGAIATEPSIKSKLPYDVSKDLAAVTTVVRGPFALVVSNELPVKSV
AELMAYAKANPGKVNFGTPGMGTSVHFASEYFKTMAKVPLTHVPYKGASAALTALMGNEVQMVIDPLATA
KKYAEAGKIRALAVTTAQRSSLWPQMPTVAEGGVPGFDTAVWYGMYVPAKTPAPIVEMLNKEIVGILKSD
DMRKWLSNEGLEPVGDTPAQSQAFLREDIERWKVLAKSAGIQPE
>gi|319763091|ref|YP_004127028.1| dihydrolipoamide dehydrogenase [Alicycliphilus denitrificans BC]
MVETAQHFDVVVIGGGPGGYVAALRAAQLKLRTALVERESLGGICLNWGCIPTKALLHSADTLRRIRHAG
AQGITVSEPQVDFGKVVARSRQVSQRLNRGVAHLLKKAGVTVLMGTAALQAGKQVQVTDANERQQMLQAD
SLVIATGARARELPVLPFDGDRIWGYRDALSAKALPKSLVVIGAGAIGMEFASFYATLGTQVTVVEAAPR
VLPASDEDVSAFARQAMAKDGIRFLTDATLVVGQVQADGVQLMVEQKGRSLQLQAERVLVAVGLAGNSEG
LGLEHTRVVVERGLIQVADWGVTAEPGIYAIGDITGAPMLAHKASHEGIAAVEHIAGLRSGAQHHAPIPS
CVYSHPQSAGVGLTEAQARQSGAVVRVGRFALEGNGKAIAIDEAAGFIKTVFNEATGELLGAHLVGPEAT
ELVHGYTLAAALEATEADLMEAIFPHPTLSEAMHEAVLAAYGRALHI
>gi|319763092|ref|YP_004127029.1| dihydrolipoyllysine-residue acetyltransferase [Alicycliphilus denitrificans BC]
MRRELLVPKLGLTMSEGALVEWLVRPGEAFGADQSLFVIESEKAANEVGAEADGVLLEITAQAGETLPCG
TVIGYWDDGRAGEAAEAASVVVAAGKAVPDGQRVPVTPLARRLAAQQGVDLGGVTGSGPRGRIRARDVLL
KVERNALAGRALEANNTQNPLPAVTDATGAAAPVHGSLRAPSNLERTVAQRLTAAKQQVPHFYLAVEAEM
SAVMALRGQLNAAQARQRLTINHFVLAAVGRALEAMPEMNRVWTDEGILSLDSSDVGMAVNTDKGLLVPV
LRGAGRQSLGDLARQAGELIGRAQAGRLGSADMHGGAITVSNAGMHDVTYMTSIINPGQSMILGVGSIRE
VFRPDGNGQPAIRREMGMVLSADHRVLDGVGGLKFLKLVVQALQQPMGLLVA
>gi|319763093|ref|YP_004127030.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MSEELNPILCERQGAVGVLTINRPKTLNALDTPTLLVLEAALTELERDDGVRVILITGAGDKAFVAGGDI
ADLNSRQGLQHYEEFAEVIHRVFRRFETSDKPTVGAINGWALGGGTELLLTLDLRLVAEEARLGLPEINL
GLFPGAGGSQRIIRQVPLCRAKELMFTGGQITAAEAVDLGLCNRAVARERLMDEAMALAQQIAQKSPLTL
KLLKRALRDGAEMPLGAALAHEQAIIGLVLDSRDAHEGCSAFLEKRKAQFTGK
>gi|319763094|ref|YP_004127031.1| transketolase central region protein [Alicycliphilus denitrificans BC]
MSSTTEMRYVSAVTQALRDSMEQDPAVVVMGEDVANAGGSFKATRGLLDTFGAQRVIDTPISESAITSAA
VGMALTGLKPVVEIMFMDFITLSMDALVNQAAKARYMFGGQGSVPMVLRTPHGGGLSAGPQHSQCLEAWL
AHIPGLKVVCPSSPQDAYSLLRAAIADPDPVMFIEHKAMYAAKGPVDTAQAARIGTARTARAGRDATLVT
YGATVSTCLQAAEQLAKDGVEVEVIDLRSIQPWDKAAVLESLSRTHRAVVVHEAVQSFGVGAEIVATIAD
EGFDELDAPVLRVAAPFMPAPFASSLEKGYVVTAERVIDAVRKTLA
>gi|319763095|ref|YP_004127032.1| pyruvate dehydrogenase (acetyl-transferring) [Alicycliphilus denitrificans BC]
MERNSVKSRKRNTVQVERLAALYRIMSLIRQVETALTRLFANGEVPGFIHLSIGQEAVAAGVASVLLPQD
SLATTHRGHGHVLARGMDVTGFMKEIMGREGGLCKGRGGSMHVADLGLGILGANGIVGAGIPIALGSAMA
HQARKTGGVAVAFFGDGAMAEGVLHETLNMAALWKCPLLLVCENNGWSEFSPTSRQFAARLEQLAAAFGV
GYAKVDGNDVLAVAGAAGQAAARLRAGDGPFVLECMTTRVRGHFEGDAQKYRDAGELESVHAHDPLAAAR
AQLQAEGVDTAAIDQAIAAEVEAAVEAARADALPALERAIQDVYTQTVQEARA
>gi|319763096|ref|YP_004127033.1| maoc domain protein dehydratase [Alicycliphilus denitrificans BC]
MSKESAMQFPTTLHTANITVTQATIAAYAELTDDFNPIHLDAEFAAGTPMGRPIAHGTMSLCLLWQCLGN
SFPAQALQTMQLDIRFVKPVYIGDELTAGGEAVGDASGRWSVWVRGQDGTDRIVGLVSMLPR
>gi|319763097|ref|YP_004127034.1| hypothetical protein Alide_2412 [Alicycliphilus denitrificans BC]
MKTDPILFDDFQPGVLMGEYEEVYDAQQARRWQSIFGSTAQEGANAAPEAASMAVVAMMRAYLHVVAPRP
PGNVHARQQLQMHALPRLGESMRIAVTCAGKELRRERRYVDLQVRATGEGGRALFEGLLSLIWAA
>gi|319763098|ref|YP_004127035.1| hypothetical protein Alide_2413 [Alicycliphilus denitrificans BC]
MTAASYPLPRPDAYTQPYWDGAAAGELRYQRCAACGHVQLIPRSLCEQCHGSRLDWQVSQRTGTVLTFTT
VYRAPLPAFKSMVPYVIAIVDMDEGFRVMANALPQGREGLEIGVRVRIGFQEVHGMALPVVEAVQEAGA
>gi|319763099|ref|YP_004127036.1| hypothetical protein Alide_2414 [Alicycliphilus denitrificans BC]
MTMNAFITGAYDTAVGELPGSSCMGLHAEAAMGAVADAGLKLSDIDGVLCAYSFTEPHLMLASVFCEYLG
IHPATCLAIQAGGASACIMVMQAAALVASGQCNHVLVVTGDNRLTGMSRDGAVAALSAVGHPQFERPFGI
SVPASYALVARHYMHQYGVTSEQLAAIAVEHRRHAGRHPKAHKRDPITVDQVLSSRMIADPLHMLDCCLI
SDGGAAVVVSSRPAARDARGKTIEVLGAGQGHTHEHIVAAPSLVDFGCKTSSAMAFARAGVTAGDIDVAQ
IYDSFTITLAVELESIGFFERGQAGIAAAAGALGLGGRLPCNTHGGLMSYAHSGAAGGMFHVVEAVHQLR
GSADARQVRNAKLAFVHGDGGILSAHCSLVLGA
>gi|319763100|ref|YP_004127037.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MSLNFSFSPEHEAVRDTVRRLCREELASLVEDAEENEHFPRHVFKRWGELGLLGVRYPAADGGSDMDKVS
DCIVREELSYMSQAFATSWSAQTHLAIWPIWKIGTEGQKERFFKPALAGDKIAGFALSEPDGGSNIRAMK
TRAEKVEGGWKLSGSKLYITNAPIADFLMVAARTSPELKPDAISLFIVELPHKGFDIHKLRKEGIRGSET
ALIHIEDAFVPDDCLVGGRTGTYPLLLECLSENRVGVAANALGMARAAFDAAKAFADDRIVAGKRIGDYQ
AVAHKLADMAADIEAARWMVYYGAWLVDQNRLDAATAAKVKLIATETALRVSEQAIRIHGGAGIMREYPV
GRIHRDAFVYVIGEGTSDIQRNIIARDLGFKP
>gi|319763101|ref|YP_004127038.1| CoA-binding domain protein [Alicycliphilus denitrificans BC]
MLHSNQDASPGNPHRLEALLNARSVAVIGASADPAKIAGRPIAYMRARGYTGAIYPVNPSREEVQGLRCH
PSIAAIGQPVDLAIIGTAAAHVEGAIREGIAAGVKAFVVFSSGFAELDEAGRALQKRLTALARAHGVAIV
GPNCLGIANSRSGLLATFTTALESHALQQGGFSFVSQSGALGAYWMDIVLRNGIGFSQWVTTGNECDVDA
ADAIEFLVADPDTKVIGLYIEDIRRIDAFRAALDRAARAGKPVIAIKAGSSSAGAAAAASHTGALAGNDA
LYDACLQQHGALRVRSLTEMMDAARLLLHNAAPAGPRLAVMTVSGGAGVLIADASEPLGLQLPALKPEVA
QALVPILPSFVHPSNPLDITGNVLQDTPMIGRAMQALATDTDTHAIVLFIGMMHSIADAFVQALSQARSH
VRCPIVVIWVGAMDSSIHALEAAGIPVFLDIPQAMQALARGLQMRRTRAQIIQRPGALPTMPVTDGGRSL
PTLSEWDGKRLLASQQSVQIPAGRLLKAGEALPSGLPYPVVAKLQSDQLLHKSDAGGVALRIQDAPSLQE
AIERLHELGAGLGIPVQGILVEQMLPFDHELLLGLRREPRFGPVLTLARGGIEAELDPDVVNLLLPANAD
DIAQMLGRLRCFKLLQGFRGRPGADMPALARRIADLCEWFLQQPLRELEINPLAIQGSQMWALDALITPM
AMD
>gi|319763102|ref|YP_004127039.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MTDIPAPEKLVGALSSGLKILRYLARSPAPVGVTRIAKDLELNASTCFNLLKTLVHERLVAFDESTKTYS
VSLGLVELARGTLEKASYVRMMHPHLQELANRHNITTTLWQVSHGDRVVLVDLAESGSALRVHMNIGQRL
PMYIAALGRCMAAHSGLTAMEIRRKVSELRWEDGPSFESYMSEVEKVRQHGYAVDHGNYVKGVITVSSPI
LDSQSRPLMAVSAVGFSTQFSQSSLQALCEDLRERCREATIAVSGGMVQKLWEN
>gi|319763103|ref|YP_004127040.1| fes assembly suf system protein suft [Alicycliphilus denitrificans BC]
MMHRRHREDVLVRRNVMAETIPSGHPVELEAGMLAQITQALGSSFTLLVEGQLMRLKGADADAIGKQPPE
AIAVPEDLHIDDLEPLIWETLRTCYDPEIPVNIVDLGLVYRLEFEPHDEPDKVRVVIDMTLTAPGCGMGE
AIANEVCDKVLALPRVGDITVNLVFDPPWDRSMMSEEAQLALGL
>gi|319763104|ref|YP_004127041.1| suf system fes assembly protein, nifu family [Alicycliphilus denitrificans BC]
MSNAENDLYQEVVLEHKRAPRNFGHLQQPTHQAQGTNPSCGDRIAVELQLAGDKVQDIRFTGQGCAICMA
STSMMTEAVKGRDLAHAQALQQHFRAVLTGEEDPEEAPLGKLVSLAGVRQYPSRIKCALLGWHALMHAIA
GSGSDPVSTEEGRP
>gi|319763105|ref|YP_004127042.1| cysteine desulfurase, sufs subfamily [Alicycliphilus denitrificans BC]
MGDKLPEHVLAGAAGDGLPVQELRAQFPVLHQKIHGHPLAYLDNAATTQTPLAVQQAVQRFEQHDRANIH
RGVHSLSQRATDAFEAARATLKRFVGAGAEHELVFTSGTTEALNLVAQGLWAAGQAKAWLRAGDRIVVSG
LEHHANLVPWQHAARMSGAELAILRPDAQGRVHMDDLRALLTPRTRVLALTAGANATGERPPYEEMLAMA
RAAGALTVLDAAQAVGHVMPGLAQLECDFMAFSGHKMYGPMGTGALAGRRAALELLHPLRLGGDMVEWVS
YESAGWAALPARLEGGTPNVAGAVGLAAAAQFITDVGRGAIDRHLHALRAQAVAGLSAIPGVTVLAPHAA
QASLVSFVARDVHPHDIGTLLDERGIAVRTGHHCAQPLLDHLGLGPTTRASFALYNTSEEVDRLVAAVAR
AIEVFQ
>gi|319763106|ref|YP_004127043.1| sufbd protein [Alicycliphilus denitrificans BC]
MDSARADILAARAHLQQQGWIARRSEAFHHLPPPQLAHWLGSAQEDACAAPVLGGAGWTLHPLGSHAASG
IQARWLDAQDAAERAELFAGLPQPGDGEAAPFAWAHRALCRLGLRLRIGATPGKEREPVWLELRHQPRAQ
AEAPLLVLDVDPGVRCVLIETHERAEGDCLHPVAQNLHAHVRLGAGAQLQHLRIVSPGAADSVAHHIHAS
LAAGAQYAQALVATCGSYHLQRNSIALQGQGAQAHSAALALAGSQQIDLQTYTQVQAAHTVSQAEALVLA
QGRAHAVANAHTRIAPGCDEAGVRQRLMGVPLAGSPRLILRPHLEILHDNVQAAHGATWGALPEDALFYA
RQRGLGEACARALIIEGMARALLERCLGSEEEGLLAQWLQGGWLSRTIGTQLQASVEVQHG
>gi|319763107|ref|YP_004127044.1| fes assembly atpase sufc [Alicycliphilus denitrificans BC]
MNHTPPLLQVRDLRVQVGERTVLRSVSLDVPAGHLVVLMGANGSGKSTLGMALAGHPSYAVQGGQALLDG
QDLLQMPAHERARAGLFVSFQSPPDVPGVKNNLFIRTALNAMHEARGQEPLDAFDFLASAKKAAKELGLP
EAMLGRPVNEGFSGGERKRNELLQLSLLRPRLALLDEIDSGMDVDGVRAVVALVHKLRREGTAFIVVSHY
LQMIEQLEPDAVLRLDQGCIAETGDLELARGIARTGFARARAQAVEA
>gi|319763108|ref|YP_004127045.1| fes assembly protein sufb [Alicycliphilus denitrificans BC]
MSSQPVNFGAPVASQDAPPVQQAPALEQALARPYQHGFVTDIESDSLPPGLDEDVIRAISRKKKEPEFLL
NWRLAAFERWRAMELPDWAHLRIEPIDFQALSYYSAPKSLKNAPKSLDEVDPKLLETYEKLGVPLHERAR
LAGVAVDAVFDSVSVGTTFRKQLADVGVIFCSFSHAVQNHPELVERYLGSVVPQGDNFYAALNSAVFSDG
SFVYIPKGVKCPMELSSYFRINAQNTGQFERTLIIAEEGSSVSYLEGCTAPQRDENQLHAAVVELIAHDD
AFIKYSTVQNWYPGDENGVGGIYNFVTKRGLAAGRRSRIAWTQIETGSAITWKYPSVVLRGEESNGEFHS
IAVSNHFQQADTGTKMIHLGKNTTSRIVSKGISAGHAQNSYRGLVRVNAGAAGARNHTQCDSLLIGSDCG
AHTFPYVDTARGDAVVEHEATTTRISEERLFYCQQRGIDPQEATALIVGGFCQAVLEELPMEFALEAKAL
LAVSLEGAVG
>gi|319763109|ref|YP_004127046.1| ribosomal protein s21 [Alicycliphilus denitrificans BC]
MTTIRVKENEPFDVALRRFKRTIEKLGLLTDLRAREFYEKPTAERKRKKAAAVKRHYKRVRSMQLPKKLY
>gi|319763110|ref|YP_004127047.1| gatb/yqey domain-containing protein [Alicycliphilus denitrificans BC]
MSLKEQITEDMKNAMRAKDAGRLGTIRLLQAAMKQKEVDERVTLDDAAVIAIVDKLIKQRKDSIAAFEGA
GRQDLADKEKAEMAVLQAYLPARMSEAEITQAVQAIVAEVGAKGPGDMGKVMGVVKTRLAGKADMGQVSA
AVKSALAG
>gi|319763111|ref|YP_004127048.1| metal-dependent phosphohydrolase hd sub domain protein [Alicycliphilus denitrificans BC]
MNAPDTSPVAAADAAGDNRHYLRALTDMADRRNVVTQEALYTERGMKLLDKGVRVDSRLYDRLVMHKLRG
KIEEHLAMEDMVSVHSLVQVASAQCESDTLAYLLVHTLEGMTADRLLAPLRSVLLPSAVAFKLTVMREQH
PALFAHSVRMMLVAVYLATKSGWTERECVPLATAALLHDVGVMHMDPVWHDPANRVTGAGRKQLLVHPVM
AMLITREQSIYPRSVEQAVLEHHECMDGSGYPRGLRGEEISPMGQVLLLSEVVAAFFEKYAKEAAAQRLT
LMLKLNHRKFPAELVAHILPVLQIRTLQSDVPVTQEDVERTVELLSSAFGDWERHCADLPPQALQHPSEQ
ASALVAQRLAALQKTLFEAGSHPLQLAEVLQHLQGDEEGMVEVALLGREALWQLQSIVDFIHGRWPQLQD
GTDAGDVAVAQWRDACAARLEAISSSCGHIVAGPGLEDAAVLE
>gi|319763112|ref|YP_004127049.1| 3-oxoacid CoA-transferase, b subunit [Alicycliphilus denitrificans BC]
MPWTQDQMAARAAQELEDGFYVNLGIGIPTLVANYTGDKEVWLQSENGMLGIGPFPTEDKVDADLINAGK
QTVTTIPGSSIFGSHESFAMIRGGKINLSILGAMQVSEKGDLANWMIPGKMVKGMGGAMDLVAGVKRVIV
LMEHVARKKDGTTDLKILPQCTLPLTGVGVVNRIITDLGVMDVTPEGLKLVELAPGVSFEDIQSKTGVTL
LR
>gi|319763113|ref|YP_004127050.1| 3-oxoacid CoA-transferase, a subunit [Alicycliphilus denitrificans BC]
MKKLYPSAAEALKGVVADGQLLAVGGFGLCGIPEALIDALRDSGVKNLTAISNNAGVDGFGLGKLLETRQ
IKKMISSYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFTKTGVGTMVAEGKELREFDGE
TYVMERSLVPDVSLVKAHRADKSGNLQFRLTARNFNPAAAMAGKICIVEVEEIVETGAMDPDQIHLPGIY
VHRIVHNPHPEKRIEKRTITEKTGD
>gi|319763114|ref|YP_004127051.1| pas sensor protein [Alicycliphilus denitrificans BC]
MDVADYRLAFEMAPVGLVISRNRTMVDCNRHVCEMFGASRELLIGQSFRVLYPSADEYERLGRRMEPILN
ARGYYADNRIMKRACGETFWCHVSGRALNREDPHASGIWSFEDLSAQRPVRAELTAREREVAARVLDGMT
SKEIGRALDISHRTVEIYRARLMRKYGASTAADLVQKLLAA
>gi|319763115|ref|YP_004127052.1| acyltransferase 3 [Alicycliphilus denitrificans BC]
MLTFDYVLHHPRFLEFSAPDTDSAVARATRSPVLPHKIHDTRRNGATTQSSHPFALAYNPALDGLRGVAI
LLVILSHAHAPLFDGAFYGVDLFFVLSGFLITTLLLQELQRNGRLDYWRFYRRRLWRLMPALALLLLAYC
VFAPMLWPDLTDVYSDALVSLLYLADYGIAFFDSPGTLLHMWSLSVEEHFYLVWPPLLAVLARTAPRGGL
WRRIAGLLLLAWAWRVAWVAQGQQFYEIFFRFDTRATGLLAGSLLAALVLEQPAWFEALRQRLTHFMWVV
LAVPLLMAQAWDDMNAMVWGMTVVECAAVVVLLAILQRRGAVYEMLSAPVLTMTGRLSYGIYLWHYPVVR
YLRADLPWPAVVLLGLAISAALAALSYYTIERWALRRRDARPAPRAARPRPAGAEGMQRPLSQ
>gi|319763116|ref|YP_004127053.1| amino-acid n-acetyltransferase [Alicycliphilus denitrificans BC]
MSTVFNFTFVPWFRSVAPYIHKFRHQTFVVGLTGEAIAAGKLQSIVQDLAMIQAMGVKIVLVHGFRPQVN
EQLAAKGHAARYSHGMRITDPVALDCAQEAAGQLRYEIEAAFSQGLPNTPMAGARVRVISGNFLTARPVG
IVDGVDFQHTGLVRKVDVAGIRRSLESEAMVLISPFGFSPTGEAFNLAMEEVATRVASELKADKLLFLSE
VPGIRTRPDDPAGEDNPIDTELPLAQARQLLSRLPAAQRPTDAAFYLQHCVRACEHGVERSHIIPFAVDG
ALLLEIYVHDGIGTMVVDEKLEELREATADDVGGILQLIEPFEKDGTLVKRDRTEIERDIAAYTVIEHDG
VIFGCAALYPYPEAGTAEMAAVTVSPNSQGTGDGEKLLKRIEQRARMLGLTSIFVLTTRTMHWFIKRGFS
PVDPDWLPEARKRKYNWDRKSQVLVKKL
>gi|319763117|ref|YP_004127054.1| endoribonuclease l-psp [Alicycliphilus denitrificans BC]
MTIQRFKTNNRMSQAVVANGFVFLAGQVADDTSASVAGQTRQILDKIDTLLAETGCDKARIVQATIWLAD
HKTFAEMNEVWDAWVPPGHAPARACVESALAFPPYTVEIGVVAAL
>gi|319763118|ref|YP_004127055.1| d-amino-acid dehydrogenase [Alicycliphilus denitrificans BC]
MHTVVLGAGVAGITSAWYLASQGRQVTVIDRQPLAASETSYANAGMVAPGHSYTWASPRAPGILWRSLRD
STQALRLKLNADPYMWVWLWKFLQNCTAERSRINTSRKLVLCRYSQERLQELTATLGLEYERISQGALYM
YRDAASFQRGQANMRILSDGGMRLDVLDADGVITREPALASAREHIAGAIYCPSDESGDARMFTRALAER
CRAAGVRFLMDTSIDRIEARGDRIAAVHTSAGPVTADEYVLSLGSYSPILARPLGYSLPIYPVKGYSVTF
PIGDGHQPPTLAGVDENNLVAWARFGDRLRFTATAEFSGYDTRHSPRDFEPMLRAARQLFPNGADWSQPD
HWAGLRPMTPENTPILGASRHGNLFLNTGHGHMGWTMACGTAQILADLMNGRKPAIDITGMTLA
>gi|319763119|ref|YP_004127056.1| asp/glu/hydantoin racemase [Alicycliphilus denitrificans BC]
MNDTATPEGAYTVLPFTMDEGVMARAAIGLVVLATDQTLEHEWRQIIDLPGVAFFEARLYNSPDITPANL
AEMEKDITAAVELIVPDVPLQVVAFGCTSGSIVIGEEQVARRIREARPGAAVTTPITGAVAGLKALGAQR
VALITPYVQSVNQLFQTHLQACGLQVSRVGTFNHANDNEVARIDAASLRAAILATGGHGDVDAVFVSCTS
LRMATLIRGVEQELGKPVIASNSAMAWHALRLAGVHDALPQFGRLFEI
>gi|319763120|ref|YP_004127057.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MRSNFPSGRRLRNVAAASLLALGGATAAWAQDSINIGAVLSLTGANATVGEDVRRGIMLGVEHVNAKGGV
LGKKINVIVEDSGGNPTTALNAARKLATVDKVPVVMGEYSSGITLPMAQYLVKEGVTHLNINSSSTKIRQ
LGATSFSLVGLENFSNKFAAADTYALGFRRVAMIAPNNAYGQGVFEGYKAEFEKLGGKVVTEVLYTAGQS
TYRRELQQMARSNPDAYVYTAYGQESAVINREAEELGLRKVPWYAILMTMSLSDTPPAIANGQLGMELGS
VQGAAGKAYADAFKAKYKEGFKTSYTGYGYDGVLISAAAIEKAKATTPAAIQAALKELGSGAGYIGATGT
IRFDQDRQRIDPPYDKHKFEGGQLVPR
>gi|319763121|ref|YP_004127058.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MFQFVVDTVLRASDLALIALGLSMLYGLVKFPNVAHVQYAMFGAYVTYALQSGGFPLVVALLAGSVAAGL
LTLGLQVLVFQRLLRGGPAIAMIGSLAVAMLVIAIMQGLAGSFPRMFNLPRVEPLVIGGARIAWTQLYLM
GTTIVLLVLFMLVLFRTRLGRSMRALSSNPMLANASGLNAERITYFVSFASGAIAGLGGSMLALSTGAHI
NLGNDLLLPVFAAAILGGLGNPIGAVFGALLIALTETAVTNLNFGPLLGRELAFMPVGYISAGSFLILLL
ALLFKPYGLFDREVRRV
>gi|319763122|ref|YP_004127059.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MFDFAVSTATIAGIYALMALGLNLQAGYAGLLNFGHIAFAGLGAYAAGIGFGLGWAPLPSLALGVGLAML
LGAFMAGLGRKLASDYWGIATLAIAEILRTIATNEGWLTGGANGISAIPALFDSLPRPWNAVAFLALVLA
VLAAAAWLCARLGNGRFGRALRLMREEPQLATCLGYNLRTLKTRAIMASAAVTALGGFLYAHYMSFAGPE
YMLASETFLLWTMVMIGGLGNTLGVLVGVATVQAAHVLVPFAKDWIGFDSDVAGALRLGLIGAILLACLL
WRSEGLVPEKLRKIP
>gi|319763123|ref|YP_004127060.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MTPLLRVNDVAKAFGGNQVLHGVEFDIAPGEIVGLLGPNGSGKSTLLNTITGFEAIDRGQIAFEGRRIDQ
MPAHRIVAAGVGRTFQLPSMPRKMSVMEVAMAASTAHHGVWGTLLGTAASRQAEAAAHAKATALLEQLLL
THVRDLPAAALSGGQKKLLGIVCALMGDPRLLMLDEPTAGVHPNLRRDIVAALQRLNAQGMTLVIVEHDM
HFIREVCTRCIVLDRGRIVASCRPDELASNEHVVRAYLGSVEPKAVEETL
>gi|319763124|ref|YP_004127061.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MIRIDNIVAGYTPEVDILKGISLHVDRAEIVTLLGPNGCGKSTLLKTIAGVLLPRSGTVTLEGQDRSQMP
VHRKIRHCSLGFVPQTENVFANLTVRENMQVGGHYLPPDACQRRMDQLCDLYPVLGRKIEARAASLSGGE
RQILALARALMPSPSLLLLDEPSAGLSPKVLQEVFAAIVEVRDKERVSILMVEQNAMEAMRMSDRAYILS
MGTVALTGTTRKLLHDPQVRELYMGGRAA
>gi|319763125|ref|YP_004127062.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MTHRTTRRAVALATCALLALPAASHAQTAQAPVKFGATLSLTGASASVGEDQRRGMLIALEEINARGGVL
GQPLQLVIEDTGGRAVSALDAAKKLVSVDKVAAVLGEYSSSLTIPVGQYVVREGLPFVNHGSSSPAVRTI
GEGAFSVIGLDDASARFSAQDLWELGHRKVAFIAPNNAYGQGVAAEFRKNFKKLGGTVASQVLYTAGQST
YRRELQQMERAKPDVYVYSAYGQEAAVINREAFELGLHQGQPWYAIYHTMCTTDSAPEHVAGQRGIDVRS
VGPQGQGFKAAYEAKYGHPFKSSYTGYAYDSVRLLAAAVQQAGTTRPDAVKQALRSIANGYEGATGTLTF
AADGQRADQPYQKTVYRGRVQPR
>gi|319763126|ref|YP_004127063.1| dihydrodipicolinate synthase [Alicycliphilus denitrificans BC]
MPSSPASRAPARLPRGSLVALLTPFTDDLRIDLPALRRLIDWHIDSGTAGIVIAGTTGECATLSHTEHRD
LLAAAVEHAAGRTHVMAGVGANSTVEAVALARFAEECGADSLLSVVPYYNKPTQRGLVAHFSAQADATAL
PLVLYNVPGRTVVDLQVATVAELARHPRIAGIKDATGDMARAADIALAVPPGFAQYSGDDFTSLPYLALG
GQGVISVVANILPAEVAALCRAMDEGDWAGARARFLRLMPLTCALFAESSPGPAKLAAQLRGLCAGALRL
PMCEVSPATVAAVRTALEAWPA
>gi|319763127|ref|YP_004127064.1| pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein [Alicycliphilus denitrificans BC]
MSDLSVGSRLRAVGLDDKYTATEGTVYLTGVQALVRLPMMQKRRDRAAGLDTAGYITGYRGSPLGTFDDQ
LVKARKHLQAHDVVFVPGVNEDLAATAVWGSQMAEIGGEGRFDGVFSIWYGKGPGVDRSGDAFRHGNLTG
SSKNGGVLVLMGDDHTCESSTTCHQSEFALVDAQMPILSPAGVPELIEYGLYGWALSRYSGCWVGMKCIK
DTADASGSVEVHEAGSSFTCPELPDMPPDGLNIRLPDTPHAQEYRLVNHKLDAVRAFARANRIDRVAFGR
REGARIGIVTSGKSWLDLRQALADLGIDEVRAQALGLAVYKAGLVWPLEPEGIAEFALGLDKVIVIEEKR
ALLEAQLKDILYGRPGAPQVIGKKDERGAKLFRTELALDAAMIAQVLGHRLAEIDPALLEATHALARRKP
VLGAVDVMARSFYFCAGCPHNTSTRIPEGSRGYAGIGCSWMAQSMDRGTLGYTQMGAEGMAWVGEAPFSR
RTHMFQNMGDGTYFHSGLLAIRAAVAARTNITFKLLYNDAVAMTGGQRHDGPLDPVRMTQQVHAEGVARI
AVVVDDPGKYGGVTGWAPGVTIHHRDELDAVQRALREVPGTSVLVYDQTCAAEKRRRRKRGEFPDPDMRL
VINEAVCEGCGDCGAQSNCVAVVPVETEFGRKRAIDQSACNKDFSCLKGFCPSFVTVRGGKLRKGSGTGS
DSLASPLPEPALPDLAQGVYSLVITGVGGTGVVTIGALLGMAAHLEGKGVGVLDMAGLAQKGGSVWTHMR
FGASPQAIAAVRVAPGGADALIGCDLVVAAAGNTLTMTRKGATRAIVNTQEVMPGAFTQNPDMQFPANPL
VKTIARAIGEGNLELVDAGRLALALCGDAIATNLFMLGAAYQRGLVPVSSQAIERAIELNGAAVKMNLAA
FRWGRRHAVDPQAVAASAGAVQRKQAPSLDEAVQRRVEFLTGYQNAAYAARFKALVDAVRAHESRVWPGQ
EQLTSAVAQSFFKLMAYKDEYEVARLYAAPAFRAQIDAQFEGAPRLAFNLAPPLLGQKKREFGAWMLPAF
GVLARLKFLRGTALDPFGRTEERRHERAMIDQFEALVQRLLKEARPDQHELAVQIAQAPMKVRGYGHVKE
AARQAYEAELAQLLQRWQEPQVVRRRAA
>gi|319763128|ref|YP_004127065.1| gntr domain protein [Alicycliphilus denitrificans BC]
MPVKKKSNKESAHVPQTRDASSVERLYLELRERAMRYDFRPGARINEQALGREFGVSRPPLREALNRLVA
EGFLDFVMNKGFFRKAISVEELYNLYQVRIALERRALFLAVQNATDAEIESLRAYWDGVMAHASGMSIGD
LLLADEEFHRRLTAMSHNKELSQFLEQVTRRIHVARHIDLEQSDWNARAFNAHAQLLDLLQARKLEPALL
ALSEHIDLSLKRAVQITKEMVAKFFLQDQTWSSGQAAAESSGPNGTAKAR
>gi|319763129|ref|YP_004127066.1| gaf domain protein [Alicycliphilus denitrificans BC]
MPDALQKLLGRLQELNEVGAALSRERDIDLLLERILDAAQMLTHADAGTLYRVTDDGSALRFALVRTHSL
GLHQGGRSGQAVDFPDLPLYLPDGRANDSLVAVHAAVHDCTVSIADACGSADFDFAGSRAFDQRTGYRSC
SFLTVPLRNHDHELVGVLQLINAIDPATGAVQAFSQEDCSIAESLASQAAIAVTNRLLITQHERLFESFV
SLINLAIDEKSPYTGGHCQRVPALTMMLAEAADATTEGPLAAFTMTERDRYELKMAGLLHDCGKITTPVH
VVDKATKLQTLYDRIGLVDTRFEVLKRDAEIDMLRRQLALRPQADAAAEEQLQRGLQCQLQELDGERAFL
RHCNLGSEAMLPHEQQRVRDIGTGRGWRDPQGRQANFLTPDEIENLSIRSGTLTLAERSIVNHHIVATIR
MLESLPWPKHLRNVPEYAGGHHERMDGKGYPRGLVREQLSWQARMLGLADIFEALTAADRPYKRPMTLPQ
ALTIMRKMRDNGHIDPDLFDVFVRERVYLRYARQFLEPEQVDLDAVHAPAP
>gi|319763130|ref|YP_004127067.1| disulfide bond formation protein dsbb [Alicycliphilus denitrificans BC]
MLLNWITIAPRRTLALISAACLGLLAFGMYLQHVVGLEPCPMCIVQRYALISIAVFAGLASLNGKKAWWM
GWSVAALAMAGFGAFTAARQSWLQWYPPEVAACGRDFYGMIENYPISRAVPMIFRGSGDCSAVDWTFLGG
SIANWSFVCFVVFAMLLLVLLGSPRARRA
>gi|319763131|ref|YP_004127068.1| sulfate abc transporter, atpase subunit [Alicycliphilus denitrificans BC]
MSIEIRNVSKQFGSFQALRDVSLDIQSGELIALLGPSGCGKTTLLRIIAGLETPDTGSIHFSGENQTDVH
VRERGVGFVFQHYALFRHMTVLDNVAFGLRMKPRRERPSEAQIRQKVMDLLKLVQLDWIADRYPSQLSGG
QRQRIALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTSIFVTHDQEEALEVADRVVVI
NQGRIEQQGTPQQVWDNPASPFVYGFLGDVNLFKGRANDGRIHLDEGMQLDSPEARHADGAPAFAYVRPH
DLDVERYSPGQALDAHGRPRGIVVQLVRSIVVGPIARLELIPEGSTQSADNAAPDMLIEAQIPAQQFHDM
GLRDGEMLVVTPRRAKVFLDEAAGI
>gi|319763132|ref|YP_004127069.1| sulfate abc transporter, inner membrane subunit cysw [Alicycliphilus denitrificans BC]
MSAAARTAPRARAGTTEAPWVRWLLTGIAMAFLLLFLVLPLAAVFTEALRKGVDAYLAGLSEPDAWSAIR
LTLLTAAIAVPLNLVFGVAGAWCIAKYEFKGKAFLTTLIDLPFSISPVVAGLMYVLVFGANGWFGPWLAA
HDIKIIFAVPGIVLATVFVTFPFIARELIPLMQAQGNDEEQAAIVLGASGWQTFWHVTLPNIKWGLLYGV
ILCNARAMGEFGAVSVVSGHIRGQTNTIPLHVEILYNEYQSVAAFAAASLLALLALVTLVIKTVAEWQNE
QQRKAATELPPERPAGR
>gi|319763133|ref|YP_004127070.1| sulfate abc transporter, inner membrane subunit cyst [Alicycliphilus denitrificans BC]
MTTLALGAAQPRKRAPRRVLPGFGLTLGYTLFYLSLIVLIPLLALLFKSFSMTWPQFWEAVAAPRVLASY
RLTFGASFIAACVNLVFGLLIAWVLVRYQFPGKKVVDALVDLPFALPTAVAGISLTALLAGNGWVGQYFE
PLGIQLAFNPNGVVIALIFIGLPFVVRTVQPVLEDSEKELEEAATSLGATRWQIFRHVILPGIMPALLTG
FAMAFARAIGEYGSVIFIAGNMPMVSEITPLIIIGKLEQYDYAGATAVAVVMLLISFVMLLVINALQAWQ
RRHAGMPA
>gi|319763134|ref|YP_004127071.1| sulfate abc transporter, periplasmic sulfate-binding protein [Alicycliphilus denitrificans BC]
MNTRIKTLIASLALAASGLASAQANSLLNVSYDVAREFYKDYNQAFIAHYKKTKGVDVKVDQAHGGSSAQ
ARAVNDGLAADVVTFNTTTDVQFLADNGVVAKDWAKKFPNDASPTTSTMLFLVRHGNPKNIKDWNDLTRP
DVKVIVVNPKTGGNGRYAYLGAWGSVREKGGTDAQAAEFVAKLYKNVPVLAKGGRDATATFLQRNIGDVL
ITFESEVVSVEREFGKGKVDAVYPSVSITAENPVAVVERTVAKKGTAELAKAYLDYLYSDEAQEIAARHA
IRPRSEAVLKRHADQFKPIQQFTVAKYFGSLSDAQKVHFNDGGQFDKLYQSGK
>gi|319763135|ref|YP_004127072.1| hypothetical protein Alide_2450 [Alicycliphilus denitrificans BC]
MPPVALPETHAGARAVVIVPGWRDSGPGHWQSLWAERVPGARRVLQADWFSPEREAWVGALEQVVLAAPQ
PVVLVAHSLGCIAAVHMRPEAAARVSGALLVAPADPERRAVLSDFAPVPYARLPYRNILVASDNDPYCPI
RLAGAYARAWGSEFVRLPQAGHINVESGHGEWPLGWALLRSLLQDALATAPCLAAA
>gi|319763136|ref|YP_004127073.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MQDLNDMLYFAEVAERGGFAAAGRALGIPKSRLSRRVAELEAHLGVRLLQRTTRTLSLTEVGEAYLRHCL
TMRESAQAAADAVAQVRSEPRGTVRVTCPVTLAQTVLAELMPQFLERHPLVRMEMQVTNRVVNVVEEGVD
VALRVRATLDESGSMVVKRLGEGCQLLVASPAQIARQGMPGTLRDLARMDTLAMSASEGRASLRLIGPDG
REETVQFTPRYVADDLLTLKHAALAGTGLCWLPDYLCLAELEAGQFVRVLPQWSQPKGIVHAVFASRRGL
SPAVRGFLDFLGETMPGNMRAGVDR
>gi|319763137|ref|YP_004127074.1| nad(p)h dehydrogenase (quinone) [Alicycliphilus denitrificans BC]
MQLLHIDSAITGDQSVSRQLTARIVQAWQASHPATQVSYLDLVAEAPAHFTMEAMAPRTGQTEGLSEAQQ
RENAVSERLVRQFLAADVVVIGAPFYNFAIPTQLKAWIDRIAQPGRTFRYTANGPEGLAKGKTVIVASSR
GGVYSTSEAGRAMEHQESYLQTVLGFFGVTDVRFVRAEGMALGEEAKTQALAAANQAIEAHVQAGAANQE
RISQAA
>gi|319763138|ref|YP_004127075.1| nadph-dependent fmn reductase [Alicycliphilus denitrificans BC]
MQRPRPGGFFQKGFRMSKYRIAVVVGSLRKDSFNRKLANALARLAPPDFEFEQVRIDDLPLYNQDDDGHQ
AAPVLRLKKEIAAAQGVLFVTAEYNRSIPGVLKNAIDNASRPYGQSAWAGKPAGVIGISIGTIGTAMAQQ
HLRNVLAYLDMPTLGQPEAFLQAKEGLFDADGNIGEASRAFLQGWVDKYVAWVKRHNA
>gi|319763139|ref|YP_004127076.1| lipoprotein, yaec family [Alicycliphilus denitrificans BC]
MLSKRSLIRSTLALALAVGFAGAAPAQDKPLKIGVTAGPHAQIMEQVKKVAEQQGLKIQVVEFSDYVQPN
AALAAGDLDANSYQHKPYLDAQIKDRGYAFAVAANTVNFPIGIYSKKIRKLADLKEGARFGIPNDPTNGG
RVLLLLQAQGLIKLKDGAGLKATPLDVVGNPKKLKFVELDAAQLPRSLDDLDASAINTNFAISAGLNPKT
DAIAQENPDGPYVNILVVRAADKDKPWVARLVKAYHSEEIRRFIDTQFKGSVLAGW
>gi|319763140|ref|YP_004127077.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MFENFSEMMLELFATSLWETVIMVGVSGVVGGLVGIPLGVFLRLTDKGGILQNAPLNTVVGGIVNAVRST
PFIILLVAIIPFTRLVTGTSIGTWAAVVPLTLAAAPFIARLVETALREVDSGLVEAAQSMGATTWQIVWK
VLLPEALPGIVAGLTISFVSLTGYSAMAGAVGGGGLGDLGIRYGYQRFLPDVMLAVVLILIVFVQAIQSL
GDWAVRRMSHR
>gi|319763141|ref|YP_004127078.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MIDLRGITQIYQGPQGPVEALRGIDLHVTPGEVFGIIGRSGAGKSSLVRVINLLNRPTKGQVIVDGRDLT
RLKDAELRAARREIGMVFQHFNLLSSRTVWDNVALPLELAGMDKAEIHARVQPLLDLVGLSHLADRYPAQ
ISGGQKQRVGIARALASRPKVLLSDEATSALDPETTRSILDLLRQVNRELGVTVVLITHQMQVIKQIADR
VAVIEAGRIVEMGPVIEVFTRPREDITKSLIDEIVPQELPAGVLARVRSLAARLAPQASGQLLRLSYAGE
QAYEPILSHLIRELGLDLSILHGQIDEIQEQTFGSLAVYASGPMARIGAAIDYLRAQGVVVKTVEVN
>gi|319763142|ref|YP_004127079.1| membrane protein-like protein [Alicycliphilus denitrificans BC]
MTRFTVAYWCVLAAALLPILCALLAKRGSFRGADNHDPRAWLARQSGWRARANAAQANSFEALPFFIGAV
VIAHQIGAPQAALDLLACVFILLRVSYIALYVGDSPTARSVVWGLAFLVNIAILLLGWR
>gi|319763143|ref|YP_004127080.1| recombination protein recr [Alicycliphilus denitrificans BC]
MSDTGSLDALIQALRRLPGVGVKSAQRMAFHLLQHDRGGAQQLSQALARACEQVRHCERCHTFTEGAVCD
TCLDPARDATRLCVVETPADQSALERTAAFKGLYFVLMGRLSPLDGVGPRDIGVHKLLERAGDGVVQEVI
LATSFTAEGEATAHAIAEALKRRGIHVTRLARGVPVGSELEYVDLGTIAHALADRR
>gi|319763144|ref|YP_004127081.1| uncharacterized protein family upf0133 [Alicycliphilus denitrificans BC]
MFNKGQLAGLMKQAQAMQDNLKKAQEELASIEVEGESGAGLVKVLMTCKHDVKRVTIDPSLLADDKDMLE
DLVAAAFNAAVRKAEETSQEKMGKITAGMPGLPGGMKFPF
>gi|319763145|ref|YP_004127082.1| DNA polymerase iii, subunits gamma and tau [Alicycliphilus denitrificans BC]
MSYLVLARKYRPKTFSEMVGQEHVVQALTNALTQQRLHHAYLFTGTRGVGKTTVSRILAKSLNCQGPDGQ
GGITATPCGVCPACQDIDRGRFPDYTELDAASNRGVDEVQGLLEQAVYKPVQGRFKVFMIDEVHMLTNTA
FNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNLRPMAPETVLEHLARVLAQEGVAAEPQALRL
LARAARGSMRDALSLTDQAIAFGSGQLQEAAVRQMLGSVDRGHVFRLIDALAQGDGRTVVETADTLRTHG
LSAASTLEEMSAVLQRMAVLQAVPQMAAAVDATDPEAAEIARLAALMPADETQLLYSICLHGRTELGLAP
DEYAALTMVLLRLLAFKPAPADAAMAEKKTLTRPEPAAAPPARAHEAPPQPTPDDVNRAVHEAIGAAEPS
APSGPAPAPAVRLPVRAPEEFRQNKPQPPASQAQTAPETVAIPVRTVPEPGARLQPMAPGGAAPAPARLV
PTEEGDAWYAVVQQLIAQETITALVRELALQSQLVARDEGHWLLRVERESLNQPTARERLRAALEAAGHA
RQISVEVGVVIDSPARRNAQAAAERQRAAEDIVHNDPYVQQLMREFGAKIVPGSIKPA
>gi|319763146|ref|YP_004127083.1| molybdate transport repressor, mode [Alicycliphilus denitrificans BC]
MTAAAQQDGARIELRGSVWMTVGGRSLGGPGRVELLAYIATHGSISQAAKAMGMSYKAAWDAIDAMNQLA
GEPLVERLVGGKGGGGTKLTERGMRLVRSFGVIERAHRRFVDQLSTQAQGVADDFLLIRRMGMRTSARNQ
FFGTVTRVTPGAVNDEIELDVPGMGQKLVAIVTHESAQSLGLVLGAEAFALVKASSVIVVTDDQGARFSA
RNRLRGTVSRVQKGAVNTEVVIGLPGGAAVAAIITNESCDALGLAPGTAASALFKASSVIVGVPA
>gi|319763147|ref|YP_004127084.1| modd protein [Alicycliphilus denitrificans BC]
MNSVFFDHATIDAWIAEDAPLVDLTTHLLAVGGQPARMRFTVRGESVAACTEEAARIVRHCGGRVEDLLA
SGTPVAAGDVLLAATGDAAGLLRAWKVAQNLLEYACGVAGATARMVRAVQAAAPGVAVLTTRKHAPGLRR
IALKATLSGGAFPHRLGVGETVLVFPQHRALLGGWDGVAERLAAVAHALAEKKCVIEAHSLDEALRAAAA
GADVVQFDKAAPQDLRAWCPPLRARHPRLRLLAAGGINAGNAADYAASGVDALVTSSLHYAPPADVGVSV
APL
>gi|319763148|ref|YP_004127085.1| molybdate abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MLDGCPGAPLLLTFGVVAWSMGLQLVLGTALAWLLARRRFAGRGLLDALVTLPLVFPPIVLGYGLLLLLG
RQGWLTQWLPPPLRPEIVFTQTGLVIAAFVAGLPLMVKPAQAAFAGIPPRLREAAALLGHRPWSVFWRID
VPLARRGVAAGLVLAGGRALGEVGLSLMLGGNIAGRTETLSLAIYNHVMDGNLACANTLSLLLAGIAALA
FFVLRRWGAL
>gi|319763149|ref|YP_004127086.1| molybdenum abc transporter, periplasmic molybdate-binding protein [Alicycliphilus denitrificans BC]
MQRFFLACAAFLLAANAWAADALLVAAGAGYRKPVMELLEDFSKSSGMRTEASFGNMRQVETQARQNPDI
ALMIGDRAFLEPMGLAERFQPLGTGRLVLVTARGQAIASLADLREPRFRRIALPDRAKAVYGNAAATCLA
RLGLAQPLAGRLVEVATVPQVSAYVATGEVDAGFLNRTEALALQGRAGAAIDAPQDCYDPIELSVGVLKG
RAGGAAARAFLNYLASPAARQVLERHGM
>gi|319763150|ref|YP_004127087.1| transposase is4 family protein [Alicycliphilus denitrificans BC]
MRGSQDFQGAMFSYISLEERVPQAHPLRKLRAVVDALLATMNREFEAVYARRGRPSVPPEMLLKALLLQI
LFSIRSERQLVEAINYNLLYRWFVGLNIEDKVWDHSTFSANRERLFNEDLARAFFERVKLSAQWGKLASD
EHFSVDGTLIDAWASHKSFKRKDDDSGTPPGRNPEVDFKGQERCNDTHESTTDADARLFKKSQGDKSRLC
HMGHILMENRNGLIVDVEITHASGTAEREAALAMLERRGNRNKRATVGADKGYDSKAFIKGCRKLKVTPH
VAAKDKHSAVDARVTRHEGYKTSLKVRKRIEEAFGWIKTVGGLAKTKLIGQAKLTGQALLCFATYNLVRM
GSIGGWWDAHHA
>gi|319763151|ref|YP_004127088.1| methyltransferase type 11 [Alicycliphilus denitrificans BC]
MTIDAIDFGRLYRDHLAIAARTRKTASAWDSRAAGMAAKALRSGYTRDFVARMDLAGAESLLDVGCGPGT
IALAVAPRLRRVVGLDYSAAMLDALRALAAEQGLQHVETLHRAWEDDWSDVPVCDVAVASRATLVDDIAA
ALAKLDAKARRRVYLTHPAGGHFIDPAIQRVIGRSVPTVPDYIYLVNILHRMGIHPCLSYLTQESRLADA
QDFDDYARRVAWSLGELSVAETTRLCAWYGQATPAERAGPPMRWAFISWEKPRC
>gi|319763152|ref|YP_004127089.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MSVVLQAQSLSIGHGRRCVAQGLAFALAPGEVLCLLGANGSGKTTLLRTLLGLLPPLAGEVRCRGQNVVA
WPRAAFARHVGYVPQAHAGLFPFTVEDVVLMGRAARVGRFSAPGAADRQVARHCLELLGIARLRASVYTA
ISGGERQLALIARALAQEPSLLVMDEPTASLDFGNQIRVLEHIGRLRAGGMAVLMSTHQPEHALRIADRV
ALLGGGRLQAIGAPRATATPAALAALYGVSESAVAASLNWTTA
>gi|319763153|ref|YP_004127090.1| transport system permease protein [Alicycliphilus denitrificans BC]
MPLRWLLAVALLAAVVLAAFASGKFSVAPGDLWRAVAARLMGAQSGLPAAVETVVWSIRLPRVAAGLLVG
MALAAAGAAYQGMFRNPLVSPDILGVSAGAGLGAVAAIYLGLPIAAVQALAFAGGLLAVGAVLAVAGLVR
RHDPVLVLVLAGVAVGALLGAGIALVKILADPATQLPTITFWLLGGLNAVTPADLKATAPALLAGLVPLA
LLRWRINLLSLPDEEAQALGVAVRRLRLALVAAATLATAAAVSLAGIVGWVGLVVPHVARLLVGPEFSRL
LPASLLLGGGFLVAADTLARTAAPIELPLGILTALVGAPFFLLLLARSGGRE
>gi|319763154|ref|YP_004127091.1| periplasmic binding protein [Alicycliphilus denitrificans BC]
MMRRRLLLQLPLALTAARVRAQSEEGVVVARFGTPPGHVRKVFAAGPPAGVLVAALAPEKLIGWPLTLGD
EARALLGPQLRALPHTGRLSGRGSTVPLESLLLLAPDLVLDAGTADATYVSGVRRVSEQTGLPTVLVQGR
IADHAAQLREVGRLLGVAGRGERLALEAEAAIAQAARVRASVPPAGRPRVYYGRGADGLETGRAGSINVE
LLDFCAGRNVAAEAGQGALTRVSLEQLLLWDPEVIVTQDAAFARRVLADPQWRGIAAVRAGRVHCAPALP
FGWLDGPPGVNRLIGVRWLLERLHPGHPALRALEPLPEAVRRFYQSFYGAALSAQDVRRLLDGI
>gi|319763155|ref|YP_004127092.1| hypothetical protein Alide_2471 [Alicycliphilus denitrificans BC]
MATHPLAALVYGGDMDGGDAADALVLEFCQDLQRAGWRVGGLAQQCVPAEGGGKPRLQLVDMRTGRVFSI
SQDLGPLSRACCLDPDGVAQAGGVLRQALADRVHLAVGNRFGALEATGGGHAAELAALVGEDIPVLTVVA
AKHLDAWRRFTGGMGEELPPRMAALRSWFTLAVGRRVPA
>gi|319763156|ref|YP_004127093.1| tonb-dependent receptor plug [Alicycliphilus denitrificans BC]
MAARESAKRGRRRSGAGPVLLALGLSAGAVQAADGVFELGTVTVVGAPVKSQAAGEAVLGQEEIARYNAD
TVSDAARLLPGVSISRVGARNEEMIYVRGFDSRQVPVFVDGVPLYVPYDGYVDFGRFTTFDLAEIRVAKA
DASLLYGPNTLGGAINLVTRKPVKSFEGDARLGFGSGQTRKAAVNLGGNQDSWYYQIGASYLDADSFPLP
SGFKDYKKQPTDTGSSRENAYRTDKRLSFKLGLTPNATDEYALGYVRQEGGKGNPVYTGTSTQKSAVRYW
RWPYWDKDSLYFLSSTRIGSDSVLKARLYHDTYKNGLDMYKDASFTQHDPTSAYKDTSKGATIEWANYGL
AGHELRFAAHYKVDEHDDTGKFYRDVTTSLVAEDTIALSDRWRLSLGLSHEKRDAKEVYYWPTGATSATN
GLARLSYALTQQGDEVYAVLSHKTRFPTIKDRYSARMGRALPNPDLRPEAANHFELGVSGQPWAGGKGQA
AVFHSRVSDQIQTVVVPSGACGGTTCGQAQNVGRTRNQGLELSLAQQFSARWSANASYTYLQRTNLSNPS
VTLVDTPRHRLFAAVRWLPGAQWELHATLEAEQGRRVNFDGAYRQLGGFGTAGVKAIYKPAKDFALDFGV
DNLGDKWYELADGHPMPGRFWYVNGTYRF
>gi|319763157|ref|YP_004127094.1| hypothetical protein Alide_2473 [Alicycliphilus denitrificans BC]
MPSLATARTRTCRLLAWLLAGSPLCPAMGQTSFVPPSPAMAPVEISGSSAPLDTRGESLRLDVTRWMPPG
RAGSLGFSLGLMLPTQADLRPYTTAVAPWGSDVGLRWRAPLGSGHHLDMAVWARTARSGQEADAMGMIWH
REQGSYGTRLEVQWTSSRTRGLVPEFGAIGVQLQGDSRLLLRAKRGGPMLYYRTRF
>gi|319763158|ref|YP_004127095.1| hi0933 family protein [Alicycliphilus denitrificans BC]
MSSVPADSSDPSPRAPHCDVAIVGAGPAGLMAAEAVAAAGLRAHVFDAMPSVGRKFLLAGKGGLNLTHSE
PLEQFLSRYGARQAQLAPWLRAFGPEQLRAWADALGAQTFVGTSGRVFPRDMKAAPLLRAWLHRLRGQGV
QLHMRHRWLGWADGAAGDGVQRLRFATPAGVALADARAVVLALGGASWPRLGSDAAWVPLLEQRGVAIAP
LRSANCGFDVPRVDAPAGETRRDFLRELVGRGPTPAVGWTPFFAERFAGQPFKSVALSFTDSQGRRFERR
GEFVATATGVEGSLVYAVSSLLRDEIAAHGHATFHLDLLPDHTPGRVLAEVRHPRGSRSLPSHLKGRLGL
DGIKTAILYEQLGKAGMADPAALARAIKALPITVVAARPLQETISTAGGVPFEALDAHLMLRAVPGVFCA
GEMLDWEAPTGGYLLTACWATGRAAGEGAAHLLQNLVR
>gi|319763159|ref|YP_004127096.1| pirin domain protein [Alicycliphilus denitrificans BC]
MSIPLKQVLSTRSAPDRHWVGDGFPVHGMFGYDGEGVAERSPFLLLDYAAPTRFGPNTGYRRGVGQHPHR
GFETVTIVYDGEVEHRDSTGAGGVIGKGDVQWMTAGGGILHEEFHSQAYSRSGGPFEMVQLWVNLPAKDK
MTPAHYQGITDAQIPSVALPGDAGSVRVIAGAFGGAQGPARTYSPLNVWDVRLAAGNLADLRQPEGWSTL
VVVLDGTVAVNGATALHAAEMATLSNAGTGVTIEARDDAKLLVLAGEPIAEPVVGYGPFVMNSRQEIVQA
VNDFNSGRFGSMGR
>gi|319763160|ref|YP_004127097.1| pirin domain protein [Alicycliphilus denitrificans BC]
MTDTFTRIPARTAEIGGGVPVARMLPSRHRRTIGAWCFLDHAGPARFAAGQGLRVGPHPHTGLQTFTWML
EGEVLHRDSLGNEQVIRAGQVNLMTAGRGIAHTEESVAGETRLHTAQLWIALPARVADMAPRFDHYPDLP
RWNEGGAEAVLLAGAFMGRQSPVLVHTPLVGVDWHAPRDAALTLALDPAFEYGLVPLTGPASAQGQALAA
DELLYLPPGADTLRLELPAGTRALLIGGAPFGEDITIWWNFVGHGKPYITQAQRDWQAHSERFGEVRGFD
GPRIEAPPVPWAP
>gi|319763161|ref|YP_004127098.1| uvrd/rep helicase [Alicycliphilus denitrificans BC]
MNRAAYEHNGRPVSREAFYAIACDPARSVAVEACAGAGKTWMLVSRMLRALLDGSAPHEILAITFTKKAA
GEMRQRLQEWLEQFAHAAPEDLEKELIARGIGTEAARGKREQLRNLYQQLLASGRPLQIRTFHSWFAALL
STAPLALLQERGLPTHYELLEDDAQAKAEVWRPFLEAVAGDDALRADYEAIVAVHGRSQTHKALEAALDK
RVEFLLSDEAGIVDTSVPPFGEVYERLAGVEHPGDWLLRRAAGRAMLEDAARALMPLAPSFAAKGEELMA
ALQAGDWQGVLAALFTKDGEGTPRAFGKSCPQAVTVAQDEAQTLRDACRQHAAWLHQQRMARLSRRLIEC
FGAVKREHGWVDMNDVERTALTLLSDPVLSGWVQERLDARVRHLLVDEFQDTNPLQWQALHAWLAGYAGA
GGGQHPPSVFIVGDPKQSIYRFRRAEPQVFKAAQAFVREALGGDLLACDHTRRNAQGVIGVVNAAMQAAQ
AQQEYEGFRAHTTESQDAGRLLRLPPIARTDARVGGGGAADPLAWRDSLNEPRHEAEETLRMAESAQAAQ
WVAAQLAAGLPASEIMVLARQRERLARMEEALRALHIPCVQPEKADLAQAPEVQDLVALLDALVSPAHDL
SLARVLKSPLFGADDALLTELALLRRQERHVHLSWFDLLQKQELLALDCRAIAANLSLYKEWVDSLPPHD
ALQAIYAHGDVLARFAASAPAPQRAGVLANLRALLGAALQQDGGRYLTPYAFVRALRKGGIAAPARADAQ
AVRLLTVHGAKGLEAHSVLLLDTDARPKSAETMAVLVDWPGEEPLPRRFIFLASESSPPPSAEGAMAAER
AERQREALNTLYVAVTRAKRCLALSCVQSGSANPGSWWARLAPLMQQDADPQAGAMGAQDAGDGAFTLLE
LPRLPAAPGLPVAAPRQPAQDSLASRQGQAMHALLEQVGVAGLPLAEARARGWGQERLAQLAREFALPLP
AARAAARMAQAILNGAGAWAWDEAQLELAVNEAPLTHQGQGLRLDRLVCLRERRGGARWWVLDYKSAAQP
ERQGDLVAQLQRYREAVRAQVPGEAVGAAFLSGDGRLVELGLEEG
>gi|319763162|ref|YP_004127099.1| exonuclease-like protein [Alicycliphilus denitrificans BC]
MTVIAKSDARAAAPMWRSALQAVQEHVRCRGVHPARAVVLVPYAQLMAEAQRQWTRWQGDGFAPRFETTR
NWARQLAGFVPQGLDFAHDVARDRFTGAALLERAGLAAQREMLLAPLLEAAGQLAPVAAAVAPGRRAEWL
ERQRGVLGLAGEGSALRYEAAVARVALEWVAASRHATDVLFEPGVRTAVDALVLLQGFQPDALAQALCAA
WGDRALALPLWQAPTGQGRIRLRRALDAEDEAQRAAACAIAHVQAGRVPVALAGTDRALVRRITALLQGA
GLAARDENGWTLSTTRAAAQVMAALRACAWDAGSDAVLDWLKAVPVIEEPALRALEQWLRRNAVRRWSGA
PGRAQGRPAIAATIAQVEALRAPMRAARPLAEWLRGLRQLLQASGQWDALQQDDAGERVLLELHLAEGLE
DSLADAEGAGRRLSPGDFGHWADQVLEATRFKPDWEQDAAADLVVLPLPQLLARPFAALVLAGCDEKRLQ
AAPEPPGPWTQAQRQALGLPTREALEAAQRAAWADALQTPWVDVLWRASEGGEPLLASPLVLALPPALHA
QAPQDTRLPRAVAPGATPRPWPVGARLPVAQLSASAYADLRHCPYRFYALRQLGLQEQDELEAELDKRDF
GTWLHAVLQRFHEGLRDAPTRDAAERSARLDAAASQAREQLGLAGSDFLPYASGWPQLRDGYLRWLDEHE
AAGARFARAEVEAQRHLALKGGSLELVGKLDRIDEAKDAEGRAGTLVIDYKTEGSQTTRARVQAGTEDTQ
LAFYAALMPEGRGPLRAAYVNVGERGETRTFEAPDVEQLRDALLAGIRDDFDRIAQGAGLPALGEGSVCD
WCAARGLCRKDFWNE
>gi|319763163|ref|YP_004127100.1| thioredoxin [Alicycliphilus denitrificans BC]
MASDLIKQLSDASFEADVLKSSTPVLVDYWAEWCGPCKMIAPILDEVASAYQGKLQVAKMNVDDNREIPA
KFGIRGIPTLMLFKDGQLAATKVGAMSKAQLTAFIDQQLG
>gi|319763164|ref|YP_004127101.1| transcription termination factor rho [Alicycliphilus denitrificans BC]
MHLNELKALHVSEVLKQAEALEIENGGRMRKQELMFAIIKKRAKAGEQVFADGVLEILPDGFGFLRSPDS
SYTASTDDIYISPSQVRRFNLHTGDMIEGEVRTPKDGERYFALTKLDSVNGGPPEQNKHKVMFENLTPLF
PKEQMRLERDIKSDENITGRIIDIIAPIGRGQRALIVAPPKSGKTMMMQHIAHAITANHPDVHLMVLLVD
ERPEEVTEMQRSVKGEIIASTFDEPAARHVHVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVVPS
SGKVLSGGVDSNALQRPKRFFGAARKVEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNCEIHLSRRLY
EKRVFPAIELNKSGTRREELLLAPEILQKTRILRQFMYNMDEIEAMELMIKNMKATKTNVDFFDMMRRGG
>gi|319763165|ref|YP_004127102.1| ribosomal protein l31 [Alicycliphilus denitrificans BC]
MKEGIHPNYREVLFVDLSNGFKFVTRSCVNTKETDTFEGKEYPLFKLDTSSESHPFYTGTQKSVDNMGGR
VERFRNRFGKTAAK
>gi|319763166|ref|YP_004127103.1| inner membrane transmembrane protein [Alicycliphilus denitrificans BC]
MIHPTPAIVAQSAVRPLPRWALLLLCLAYAIPGFVGRAPWRYADVASFGYMHELALGRTDWMNPLLAGMP
PDGDGLLPYWLGAWAIDALQGWLSPAMAARLPFIALLLLTLSATWYGVYYLARGPGAQPVAFAFGGEAKP
ADYARAIADAGLLALIASLGLAQLSHETTGYLTQLCGTALLFAAGAAMPWRMAWPVAAAVAGLLGLVLSG
APTLSVLLGLGCAWLVWCGKEAPMPRRGAASAVLLASTLGAALLAWQLGLWAWRIEGFDDGKEWWYSLLR
LFIWFSWPAWPLALWTLWRWRHLIASRQWHRHLLLPLWFVLVAVGATLTTRPSDRALLLGLPALATLAAF
ALPTLRRSISALIDWFTLLFFSASAIAIWVIWLSVQTGVPAKPAANVARLAPGYEPAFSALAFGVALAAT
AAWCALVAWRTARNRPAIWKSLVLPASGATLGWLLMMTLWLPLLNYGRSMEAQVAGVAAAITDRQGCVAS
YGLNRAQIAALVYHGQLRVEPVSELPLCNWAVADAAMGPAVATLLPPAEWHAVASIGRPTDRNDRILVLH
RVER
>gi|319763167|ref|YP_004127104.1| mate efflux family protein [Alicycliphilus denitrificans BC]
MSELSIISRHAFTVLAGQLAVMAFGVTDTIVAGRHAQESLAALSIGSAVFISVYVALMGVLQALLPVWAE
QRGAGAQGAIGASVRQSLYLWAVACVLGMAVLLSPGPILQWTEVPPQLRAEVRAYLAILAFGLPPALLFR
IYSTLNQALGHPQLVTWLQVGSLALKVPLSIWFTFGGAGLAPQGAAGCAWATLAVNYGLLLVGWKMLRGH
PMYAPLALWHPMERPDGAQLGRFMRLGLPAGLSILVEVTSFTLMALFIARQGALASAAHQIASNLAAVLY
MVPLSLAIATSARVSYWRGAGDEQRAGATALKGFWLSALMGCALAATLSIARQPIASLYSTNAEVVALAT
SLLLWVAAYHVADALQTLCIFVLRSYRITLAPLLVYGVLLWGVGLYGGYRLAYHGLAGWGPLHSPAPFWA
ASAAALGVTALVFSALLLGVLSLQRHHSAQRD
>gi|319763168|ref|YP_004127105.1| phosphate regulon sensor kinase phor [Alicycliphilus denitrificans BC]
MPWRFAIFLCAQALGAAAGGWAAGPWGLAAGVALASWLCWGWESWQGLRVLRWLRQDGEPARAPALRGPW
GEACDRMRRLLRQREQRAAASDARLQEFLAALQASPNGVILLDAQGRIEWCNQTAAQHFGLQAERDLMQS
VGNLLRDPAFSNYLAAGDYAQGVLLPGRESSAAHPVTLSVQLHPYGDGRRLMLSRDVTALEQAEAMRRDF
VANVSHEIRTPLTVLVGFVETLQTLPLQEDERARYLGLMAQQAARMQHLVQDLLTLSRLEGSPPPGMAEW
VPVCALLRHCEDEARALSATLARTPAQQHRFVFPTPGQAQAAGQVAGIAAELQSALANLVNNAVRYTPAG
GSITVAWEPLADGGARFTVRDTGPGLAPEHLPRITERFYRVDRSRSRDTGGTGLGLAIVKHVVQRHGAAL
EISSVLGQGSVFGVRFPAARVRAQAGVSPAARSGAAAG
>gi|319763169|ref|YP_004127106.1| phosphate regulon transcriptional regulatory protein phob [Alicycliphilus denitrificans BC]
MKPFPHVLVVEDEAAIAELIAVNLRHNGFTPIWAEDAEAAQRELDAVLPDVILLDWMLPGMSGLQLARKW
RSAARTKGVPILMLTARGDEPDKVAGLDAGADDYITKPFSTQELLARIRAVLRRRAPEQVADSVAIGALS
LDAATHRASFQGQPLKLGPTEFKLLHYLMKHAERVHSRAQLLDKIWGDHVYIEERTVDVHVKRLREALGE
ASAMLETVRGAGYRLTAQGALEK
>gi|319763170|ref|YP_004127107.1| phosphate transport system regulatory protein phou [Alicycliphilus denitrificans BC]
MTDKHLSSQFDSELNQVSGRVMELGGLVESQIRQAIAALSQFSLEAAAQVETLEQRVNQMEVEIDHELTT
IIARRQPTARDLRLLMAFSKATANLERMGDEATRMARMVRSIIESGAARSLPSSDLRVAADLAAGLLRKA
LDAFARLDTRMALAILKEDDLIDREFDGFVRKLITYMMEDPRTISASLDLLFLAKAIERIGDHSKNVAEL
IIYLVEGKDVRHTALEEIESVVQ
>gi|319763171|ref|YP_004127108.1| phosphate abc transporter, atpase subunit [Alicycliphilus denitrificans BC]
MPSTKNTAAAAARPKLTVRDLNFYYGRFHALKGINLDIPENKVTAFIGPSGCGKSTLLRTFNRMFELYPE
QRAEGQILLDGDDLLASRQDVALIRAKVGMVFQKPTPFPMSIHDNIAFGVKLFESLSASDMDERVEWALR
KAALWNEVKDKLHQSGAGLSGGQQQRLCIARGIAIKPEVLLLDEPCSALDPISTAKIEELIAELKDEYTV
VIVTHNMQQAARCSDYTAYMYLGELMEFGATEQMFFKPRRKETEDYITGRFG
>gi|319763172|ref|YP_004127109.1| phosphate abc transporter, inner membrane subunit psta [Alicycliphilus denitrificans BC]
MSTSRKLIAGADLAQARQARYAARKRMNQVALALSLLAMAFGVFWLVWILWETMRLGLGGLSASLFTQTT
PPPNEAGGLANAIFGSFVMVLLATFVGTPIGIMAGVYLAEYDPRGWLAATTRFVNDILLSAPSIVIGLFV
YAVVVARFKSFSAWAGIMALALIVIPVVIRTTENMLVLVPASLREAAYALGAPKWKVILKVTLRAARAGV
ITGVLLAVARISGETAPLLFTALNNQFWNSDLSKPMASLPVTIFKFAMSPYENWQQLAWAAVFLITLAVL
GLNILARVLTRQK
>gi|319763173|ref|YP_004127110.1| phosphate abc transporter, inner membrane subunit pstc [Alicycliphilus denitrificans BC]
MSTTLTTRQAPPQAAADAFGGSLPPRAGMFAGALADRIFAALARGAALLTLALLLGILASLVHGAWPAIE
RYGLDFLVRSQWDPAGNEYGGLVMIYGTLATSFIALLIAVPVSFGIALFLTELSPTWLKRPLGTAIELLA
AVPSIVYGMWGLMVFGPILATWVQQPLQALLSGVPYLGALVSGPPVGIGILSAGIILAIMIIPFIASVMR
DVFEVTPALLRESAYGLGATTWEVVWKVVLPYTKTGVLGGIMLGLGRALGETMAVTFVIGNMNQLNSLSM
FEAANSITSALANEFAEAGEGLHQASLICLGLVLFFITFVVLSLSKLLLARLKKNEGARA
>gi|319763174|ref|YP_004127111.1| phosphate abc transporter, periplasmic phosphate-binding protein [Alicycliphilus denitrificans BC]
MKLSAIRVLASGVVAMGAFSGAWAQQEATGAGASFPAPLYAKWAADYHKATGVKINYQSVGSGAGLRQIE
AKTVDFGASDAPLKDDELAKKGLVQFPTVIGGIVPVVNIKGMQPGQLKLSGQVLGDIYLGKITKWNDEAI
KALNPGLNLPDATIAPVRRADGSGTTFGFTNYLSKVNAEWKDKVGEGTAVNWPLGAGGKGNEGVAAFVGR
LPNSIGYVEYAYVKQNRLTFAQLQNSAGQFVSPDEATFKAAAAGADWSKSFYQILTNQPGRQAWPITSAT
FILMHKAQDKPAQAATALKFFAWAYKEGDKTAADLDYVSMPESVKAVIMKSWADIKDGAGQPIVLK
>gi|319763175|ref|YP_004127112.1| guanosine-5'-triphosphate,3'-diphosphate diphosphatase [Alicycliphilus denitrificans BC]
MQDGTLLAAVDLGSNSFRLEIGRLDHRQIHRVEYLKETVRQGGGLDEDRNLTPAAMQRGWDCLARFAERL
AGFPRHHVRAVATQTLREARNREDFITRGSKILGFPINIVSGPEEARLIYQGVARLLPQSDERRLVVDIG
GRSTELILGRQFTPSTVASCRVGSVAWSARHFTDGALTRQAFESAETAAKAVLDEAIGSYQRGAWDVAYG
ASGTVGAVGAILAAAGGEKGVIRRDGLDWLREQLLRARHVDRLRLDGLKDDRRPVIGGGVSIVRAVFELL
DIDQMAVAQGALRQGALYDLLDREQPETDLRSDSVRALMQRFAVDNGHAERVAQLACRLFLDAAPPGSER
AARKLGWAARLHEIGRRISHSDYHHHGAYILDHADAAGFALPELHRLSLLVLGHRGKLRKLQAADLDDPV
FALQLMCLRTAVALCHARRAPDVQGITLRLEGRRCIVRSRQGWSASYPQSAHLLREEGCAWQKTPWEFVA
DLS
>gi|319763176|ref|YP_004127113.1| phosphoglycerate mutase [Alicycliphilus denitrificans BC]
MDLILWRHAEAESLSEHGDDPERPLTPRGEKQAARMAVWLDRQLPDGLRVLASPARRTEQTVRALGRKYK
LRAELLPGGSPDDLLELVQWPRTRGAVLVVGHQPMLGQVVARLLGMQTQECSMRKGAVWWLRRRQRQESV
ETILLAVQSPDHL
>gi|319763177|ref|YP_004127114.1| polyphosphate kinase [Alicycliphilus denitrificans BC]
MPPFQSSPAPVESVEERDAEEAAGRAADEAPAPAHSFHPLDRDHSILAFNERVLDWAVREDVPLLERLRY
LCIVSSNLDEFFEVRAAAHLAAAEGGDAKEGYSLHSFETLAIKAHDLVARQYALYNGSLIPAFAAHGIRI
VSHGERTGAQRRWVREYFRRDVRPLLIPVGLDPAHPFPQVANKSLNFIVRLRGSDAFGRENEIAIVKVPR
ALPRIMRLPQQVAPTGVQFVSLSSIIRTHLADLFPGREVCEFSQFRVTRHSDLAVDEEDVRSLRTVLRQG
LQHRHFGQAVRLEVSSGCSGFLSDFLQSQFGLPAAALYRVQGPVNLVRLVQMVDLVNDPALLFPPWRPAW
PARLPRSASIMAEMRRRDLLIHQPFESFEGVVAFLREAVNDPQVLAIKQTIYRTGADSELMELLREAVRR
GKEVTAVVELKARFDEEANINWAEALESIGAQVVYGVVGLKTHAKMLLVTRREGSRLRRYGHLSTGNYNP
RTARLYTDISYLTANAELTADMDAVFDHLANQNRLPRLRQLVIAPFALHGFLTGMIDAVGLAAERGEGGR
IVAKMNALTDAALMQALMRAAQRGARVDLIVRGACMLPAGVPGVTDNIRVRSVIGRFLEHTRVFYFRGGA
KEDLYLSSADWMNRNMLRRVELAWPVTDRKLRQRIIDECLVAYLHDDRDAWRLEPDGSYRRAPRALDGQG
AQNALMARYAPMAAGAAAHGKGGA
>gi|319763178|ref|YP_004127115.1| ornithine-acyl(acyl carrier protein) n-acyltransferase [Alicycliphilus denitrificans BC]
MSDSPNPAMPLSPGAPLHRPSQTAGAGAPARGGVEVAWARHLDEVREAQRLRFEVFASEMGARLQTVVPG
HDVDLFDDYCEHLLVRDAATRQVVGTYRVLTPAQARRTGGTYSDTEFDLERLHGLRERMVELGRSCVHPE
HRHGGVILALWGALAGFMARNRLDTMIGCASIPMQHGGIVTGDVAASIWHQLRRTHLALPEYRVLPRLAL
PLEHLDGSLDVEPPALIRGYLRLGTKVLGAPAWDPDFNTADLPMLMRLADLPPRYRRHFLGE
>gi|319763179|ref|YP_004127116.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MSHPLAALAPGLASSTALQRILREQQALLDSAGVGIAFIRNRTVLRCNQHCANIFGLASPEEVVGRSSEG
LHPSRDAFRELGRAAFPDLSRGLAYRTKRQLRRSDGRLFWAHLTGRLINPHDSGEGSLWIIDDIDAQRHA
RALLDSAMVSRLQREIEDRRSDQERIYRMAHYDALTQLPNRVLLAERGEEAIRLAQENGTPLAVMFLDLD
NFKHVNDSLGHRVGDALLVEIARRLQGTVRERDTVARLGGDEFVLLLPRANAQGAERVAAKMQEAAMQPV
QVGHHELSLALSMGIALFPEHGSDFETLIQCADTAMYRAKAGGRNNYCFFTPQMQEQSARALQLTNALRR
ALERNQLSLHYQPQVALPTGRVHGVEALLRWNHPELGSVSPAEFIPVAEDSGLILPIGEWVLRTALAQLQ
AWHAAGLPRLTMAVNLSATQLRQPQLPQMVEHLLHEHRIAAHMLELELTENVAVDDPHTAIASMEQLHTM
GVRLSMDDFGTGYSSLSQLKRFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAD
QLAFLREQGCDEAQGYYFSRPLPAAELERHRLGCQAA
>gi|319763180|ref|YP_004127117.1| phosphoglucosamine mutase [Alicycliphilus denitrificans BC]
MTRKYFGTDGIRGTVGQAPITPDFVLRLAHAVGRVLRRSEARPTVLIGKDTRISGYMLEAALESGFNSAG
VDVILLGPLPTPGVAYLTRAQRASLGVVISASHNPYPDNGIKFFSAQGTKLPDAWEQEVEAALDEPPMWA
DSATLGKTRRLDDAAGRYIEFCKSTFAHDLTLRGLKIVVDAAHGAAYHIAPKVFHELGADVVAIGCAPDG
LNINHEVGATHPDALVRAVRANRADFGIGLDGDADRLQMVDADGRLYNGDELLYLMAADRLARDEHVPGV
VGTLMTNMAVEQALVRRGVKFVRAKVGDRYVLEELQRQHWLLGGEGSGHLLVLDRHTTGDGLVSALQVLQ
TCVRSQRTLAQLLADVPLFPQVLLNVRLNTGQDWTVNEALERTTREVQAELGDNGRLLVRASGTEPLLRV
MVEARDAEQASRCAQRLADAARAG
>gi|319763181|ref|YP_004127118.1| dihydropteroate synthase [Alicycliphilus denitrificans BC]
MLWQTSRFDLDLTRPRVMGIVNVTPDSFSDGGRHAGTQAALRHCERLLEEGADILDIGGESTRPGSPAVP
LAEELERVVPLVREAVRLGAPISVDTYKPEVMQAVLDLGADIVNDIWALRQPGAAQVVARHARCGVCLMH
MHRDPQTMQSAPMEGDVVLQVFSFLERAALDLRTLGVEKSRIVLDCGIGFGKTVEQNFTLLARQQELLAL
GHPLLAGWSRKSSLGSVTGLPVQERLVPSVAAAVLAVERGARIVRVHDVRETVAALAVWQAVRSQSHGAA
PADARPTPIDKEEPGHDA
>gi|319763182|ref|YP_004127119.1| ATP-dependent metalloprotease ftsh [Alicycliphilus denitrificans BC]
MAVHLFLNLEPRLNNQWFSKVAVWLVIAMVLFTVFKQFDTRVGAGAGAIGYSDFLEDVRSHRIKSVTIQE
GPGGATEILATTNDDRRIRTTATYLDRGLVGDLINNNVKFDVKPREEGSLLMTLLVSWGPMLLLIGVWVY
FMRQMQGGGKGGAFSFGKSKARMLDENNNTVTFADVAGCDEAKEEVKEVVDFLKDPQKFQKLGGRIPRGL
LLVGPPGTGKTLLAKSIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFENAKKNAPCIIFIDEIDAVGR
QRGAGLGGGNDEREQTLNQMLVEMDGFETNLGVIVVAATNRPDILDAALLRPGRFDRQVYVTLPDIRGRE
QILNVHMRKIPVGQDVNPAIIARGTPGMSGADLANLCNEAALMAARRNARTVEMQDFEKAKDKIIMGPER
KSMVMPEEERRNTAYHEAGHALIGKLLPKCDPVHKVTIIPRGRALGVTMSLPEKDRYSYDKEYMLNQIAM
LFGGRIAEEVFMHQMTTGASNDFERATNLARDMVMKYGMSEALGPMVYAENEGEVFLGRSVTKTTNISEE
TMQKVDAEVRRIIDEQYALARKLIEDNQDKMHAMAKAMLEWETIDAEQLDDIMAGRAPRPPKDWTPRTPS
SGGDGSAGGGTPAVKPDPAPSAA
>gi|319763183|ref|YP_004127120.1| ribosomal RNA methyltransferase rrmj/ftsj [Alicycliphilus denitrificans BC]
MKVKTKSKKVNKAWLNDHVNDTYVKLAQKEGYRARAAYKLKEIDEQFGLIKPGHVVVDLGSSPGAWSQYV
RRRLSPGGAAMGQLDGTIISLDILPMEPIEGVTFLQGDFRDEEVLARLQQAVQGRPVDVVVSDMAPNLSG
VESVDAVRIAHLIELAVDFAVHHLKPDGALVVKLFHGSGYTQLVQLFKDTFRVVKPVKPKASRDKSSETF
LVGIGLKHPA
>gi|319763184|ref|YP_004127121.1| hypothetical protein Alide_2500 [Alicycliphilus denitrificans BC]
MPQIQLTPAERREHRANAHHLDPVVLIGGDGLTPAVQKEVDAALAAHGLIKVRVFNDDRAAREAMYQQLA
HDLGAAPIQHIGKLLVLWRPVAQKQKAADEDRKPGPRDVKVLKFGRPGQRPEVKQLRVLGNQRLTSGGQV
KRAKPKQKSVKKGQAD
>gi|319763185|ref|YP_004127122.1| hypothetical protein Alide_2501 [Alicycliphilus denitrificans BC]
MAAPAAPQRHVICMKWGTKYGPEYVNRLYAMVRRHLCGDFNFVCLTDDTMDIRNEVQCLPIPPLKLPSGI
PERGWNKLATFAADLYGLKGTALFLDVDVVVVGPLDDFFTQPGEFLIIHDYKRPWRITGNSSVYRFELGA
HPDVLEYFRGHFEEIRHRFRNEQAYLSDMLHRQGKLAYWPQDWCPSFKYHCIPRWPTNYWKQPFVPQGAR
VVIFHGECNPPDALAGRRNRRFRHIEPATWVAEHWRE
>gi|319763186|ref|YP_004127123.1| hypothetical protein Alide_2502 [Alicycliphilus denitrificans BC]
MGARLPVLAAALWWGSLSAIGFVAVPLLFAHLPTSAMAGNVAARLFEAQTYISIACCALLLVVSKKKHAE
KPEEWAQAAMVFVIAGLLLALLVQYGVAPRIVARQNLRLWHGAGSAMYALQWLCALRVLWSTARS
>gi|319763187|ref|YP_004127124.1| transcription elongation factor grea [Alicycliphilus denitrificans BC]
MATIPITKRGAEQLKQELHRLKTVERPAVINAIAEARAQGDLSENAEYEAAKDRQGFIEGRILEIEGKLS
AAQIIDPSELDAGGRVVFGATVELEDEDSGEAVRYQIVGEDEADLKHGLINVSSPIARALIGKEEGDTAE
VQAPGGVRRYEVVSVSYV
>gi|319763188|ref|YP_004127125.1| carbamoyl-phosphate synthase, large subunit [Alicycliphilus denitrificans BC]
MPKRTDIQSILIIGAGPIIIGQACEFDYSGVQACKALREEGYRVILINSNPATIMTDPATADVTYIEPIT
WQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLNKYRVELIGAKPEAIDKAEDRLKFKDAMTRIG
LESARSGIAHSMDEAWAVQKHVGFPTVIRPSFTLGGTGGGIAYNPEEFETICKRGLEASPTNELLIEESL
LGWKEYEMEVVRDKADNCIIVCSIENLDPMGVHTGDSITVAPAQTLTDREYQILRDASIAVLREIGVDTG
GSNVQFSVNPKDGRMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNDITGGATPASFEP
TIDYVVTKIPRFAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGMNEKTQDRELLE
KELGEPGPERIWYVGDAFAQGMSVDEVFELTKIDRWFLVQIEQIVKIELDLDKLYADKGDAALAALDAAT
LRALKQKGFSDRRLAKLLHTSEKAVRDARRALNVRPVYKRVDTCAAEFPTNTAYMYSTYDEECEAAPTDK
KKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEI
VDKEKPEGVIVQYGGQTPLKLALGLEREGVPIIGTTPDMIDAAEDRERFQKLLGDLGLRQPPNATARTEA
EAMEKASALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNESPVLLDRFLSNAIECDVDCVRD
ATGAVFIGGVMEHIEQAGVHSGDSACSLPPYYLKAETVAEIKRQTTAMAHGLNVVGLMNVQFAIQETDAG
DVIYVLEVNPRASRTVPFVSKATGIQLAKVAARCMAGQSLVSQGVTREVTPPYFSVKEAVFPFVKFPGVD
TILGPEMKSTGEVMGVGTTFGEAFVKSQLGAGTRLPRSGKVFLTVKNADKPRAVSIARDLAAMGFELLAT
KGTAAAIAEAGVSVQVVNKVTEGRPHIVDMIKNDEIAMVINTVEERRNAIADSRAIRTSSLAARVTTFTT
IFGAEAAVEGMKHLDTLDVYSVQELHARLTAAA
>gi|319763189|ref|YP_004127126.1| carbamoyl-phosphate synthase, small subunit [Alicycliphilus denitrificans BC]
MLSSLKAAFPPAILALADGTVFIGNSIGSIGTTVGEVVFNTAMTGYQEILTDPSYCQQIVTLTYPHIGNY
GVNDEDMESAKVQAAGLVIRDLPLVASNFRAQQTLPEFLNAQGTVAIANVDTRKLTRLLREKGAQNGAIV
GLAAGESVTPERIAAAVAAAQKAPSMSGLDLAKVVSTPKSYDWDQTEWALGKGFGRAEAPRFHVVAYDFG
VKRNILRMLAERGCKLTVVPAQTTAQEALALKPDGIFLSNGPGDPEPCTYAIEATRAFLAAGIPLFGICL
GHQIMALALGAQTFKMPHGHHGGNHPVKTLASGHVCITSQNHGFAVEAATLPASVRATHVSLFDGTLQGL
ECTDKPAFSFQGHPEAAPGPNDIGHLFDRFMASMAAAAQEKK
>gi|319763190|ref|YP_004127127.1| regulatory protein merr [Alicycliphilus denitrificans BC]
MSTQLPPIPAKRYFTIGEVADLCGVKPHVLRYWEQEFTQLRPVKRRGNRRYYQHHEVLMIRRIRDLLYDQ
GFTISGARNRLQELTHADKGLRGASLSGPDDEQALHGEPGAQSVEGDGPHAVPLDPARLRKELEEIRALL
F
>gi|319763191|ref|YP_004127128.1| integration host factor, alpha subunit [Alicycliphilus denitrificans BC]
MTSGMETGAIEFAVESLESPALTKAQLADLLFEHIGLNKRESKDMVDAFFDLIVQSLVDGQDVKLSGFGN
FQIRTKAPRPGRNPRTGETIPIEARRVVTFHASSKLKEQIQGRSKEA
>gi|319763192|ref|YP_004127129.1| phenylalanyl-tRNA synthetase, beta subunit [Alicycliphilus denitrificans BC]
MQFPESWLREFCNPPLTTQELADTLTMAGLEVEELQPVAPPFRRIVVGEIKEAAQHPNADRLRVCQVDVG
QPELLNIVCGAPNARAGIRVPCAMVGAELPPGEDGKPFLIKVGKLRGVESHGMLCSARELKLSEDHGGLL
ELPADAPLGQDIREYLKLDDTLFTLKLTPNLAHCLSVYGVAREVSALTGAPLKALQFPEAAAAIDDRLPV
RVSAPDLCGRFSGRVVRGVNPRAQTPQWMVDRLARCGQRSVAPLVDISNYVMFEFGRPSHIFDLDKIHGG
LDVRWGRAGEQLKLLNGNTITVDEKVGVIADEREVESLAGIMGGDATAVSDDTRNVYVEAAFWWPEAVAG
RSRRYNFATDAGHRFERGVDPELTVEHIERITQLIVEICGTPETTLGPIDDQRVNMPAQNAVRMRVARAA
KVIGMPLTQAQCADALRRLGLSVREEEGAVTVLPPSFRFDLRLEEDLIEEVARVVGYNNLPTNPPLAPIT
PKLRAESRRSSFAVRRELAALGYQETINFSFVEERWETELAGNAAPIRLLNPIASQLSVMRSSLLGSLLQ
VLKFNLDRKAGRVRVFELGRVFLRDAGVQGSDSSVEGYAQPMRVAGLAHGAADALQWGRKDKAVDFYDAK
GDVEALLAPLRPTFEPATHPALHPGRCARVLLDGKAIGFVGELHPQWRQSWELPAAPVMFELELDAVLQR
KVPAFRAVAKRQFVERDIAVVVAERVTHDEVMGAIAAALPGELLRSAVLFDVFRPQPPRAGESAPAGALA
QGEKSLAMRLTLGSDSAALTDTEIDAAVQTVLQALAQQTGARLR
>gi|319763193|ref|YP_004127130.1| phenylalanyl-tRNA synthetase, alpha subunit [Alicycliphilus denitrificans BC]
MNELDSLVESARESFARSATPAELENAKAQFLGKSGRLTELMKGMAQLSPEEKKTRGAAINVAKQAVEAL
LAARRQALADAELERQLKAEALDVTLPGRRQGRGGLHPVSLTLERIEGIFGSMGFDVADGPEIETDWFNF
TALNTPEDHPARSMHDTFYVEGGTSEAPHLLRTHTSPMQVRYAVQHVKKYRHLIDAGQPMPEIRVIAPGR
TYRVDSDATHSPMFHQCEGLWIGENVSFKDLKVVFTAFCRTFFESDDLVLRFRPSFFPFTEPSAEIDIQF
QSGPLAGRWLEVAGSGQVHPNVVRNMGLDPERFIGFAFGMGPDRLTMLRYGVNDLRLFFDGDIRFLSQFQ
>gi|319763194|ref|YP_004127131.1| ribosomal protein l20 [Alicycliphilus denitrificans BC]
MPRVKRGVTARARHKKVLALAKGFRGRRGNVFRIAKQAVMKAGQYAYRDRRTKKRVFRQLWIARINAAAR
ELGLTYSQFANGLKKASIEIDRKMLADLAVHDKAAFGSIVEQVKAKLAA
>gi|319763195|ref|YP_004127132.1| ribosomal protein l35 [Alicycliphilus denitrificans BC]
MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGAVAVHETNMGHMAQMLPFAGL
>gi|319763196|ref|YP_004127133.1| translation initiation factor if-3 [Alicycliphilus denitrificans BC]
MAPEVRLSGPDNEPLGIVSLQEALRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKKAAEAKAKQT
VIDIKEVKFRPGTDDGDYNIKLRNIRRFLADGDKVKVTLRFRGREITHQELGLALLNRLRDELADSIQVE
QFPKLEGRQMIMMIAPARKKPGAKPAADAAATAA
>gi|319763197|ref|YP_004127134.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MLQITLPDGSRREFPGPVTVADVAASIGSGLAKAALAGKIGDKVVDTSYRITQDSPLSIVTAKDPEGLEV
IRHSTAHLLAYAVKELFPDAQVTIGPVIENGFYYDFAYKRPFTPEDLVAIEKRMMELAAKDEPVVRRVLP
RDEAVAYFKGLGEHYKAEIIASIPSNEDVSLYREGGFEDLCRGPHVPSTGKLKFFKLMKVAGAYWRGDHR
NEMLQRVYGTAWATKDELNQYLHMLEEAEKRDHRRLGRELDLFHIDEHSPGTVFWHPKGWTLWQEVEQYM
RRVYRDNGYQEVKAPQILDKSLWEKTGHWDKYRENMFVTESEKRDYALKPMNCPGHILIFKQGIKSYRDL
PLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDQIQHEVLAFTRLLQRVYQDFGFTDIVYKVA
TRPDARIGSDEIWDKAEAALIESLKASGCDFEISPGEGAFYGPKIEYTLKDAIGRHWQCGTIQVDFSMPE
RLDAEYVGEDGGRHRPVMLHRAIVGSLERFIGILIEQHAGALPVWLAPVQVAVLNITDAQSDYCREIAAK
LQKALPHQDLRVVQDLRNEKITYKIREHALQKLPYILVAGDKEKAAGAVAVRARGNKDLGVMSLDAFVEL
IARDIASKA
>gi|319763198|ref|YP_004127135.1| gcn5-related n-acetyltransferase [Alicycliphilus denitrificans BC]
MNKPFISLCPEITRANALTLMDWLEDEAVTRYLKDSRHVSRSIEQAIGRIQLPILTHLFNQGGRFFMAYD
RHDVPVGFVRLVKKGPDCEMVLVIGNRDNWGRKLGASAIREGMKLAFFDMRAEKLIAKIHPDNARSLNAF
LRSGFLLESETPAMKSFAINSERYLRLLRESPAAHTSVIYITEIDKARLRSLIELEQGSDIFELEHEIER
AVVVDPRQVAEDVVTMNSKALLEVGNEEVQVALVYPEDADGGVEKLSVCSGIGTAILGYKEGDAFDWRSP
NRTCHIRIRKVLYQPEAAGDFHL
>gi|319763199|ref|YP_004127136.1| isocitrate lyase [Alicycliphilus denitrificans BC]
MPNSLNAQLSREQQIAALEKDWAQNPRWKSVKRGYSAADVVRLRGSVQPEYTLAQRGAEKLWELVNGGAK
KGYVNAFGAITAGQAMQQAKAGLEAVYLSGWQVAADGNTSETMYPDQSLYAYDSVPTMVRRINNTFKRAD
EIQWARGVNPGDKEFIDYFLPIVADAEAGFGGVLNAFELMKNMIAAGAAGVHFEDQLAAVKKCGHMGGKV
LVPTQEACEKLIAARFAADVMGVPTIVLARTDAEAANLITSDHDANDKPFLTGERTQEGFYRVKNGLEQA
ISRGVAYAPYADLVWCETGTPDLGFAREFAQAVLAACPGKLLSYNCSPSFNWKKNLDDKTIARFQDELSA
LGYKYQFITLAGIHSNWYNTFKFAHAYARGEGMKHYVEMIQEPEFAAREQGYTFVSHQQEVGAGYFDDVT
TVIQGGSSSVKALTGSTEEEQFH
>gi|319763200|ref|YP_004127137.1| hypothetical protein Alide_2517 [Alicycliphilus denitrificans BC]
MATVRRRGRIVHDVRPFPRLHRVNTPSRPVAYLCLALSMTLVGSYVALSKPLAAAFPVFLLVWMRFGIGG
VAMLGWIKRPVQEEPLTAQTRGLLFLQSLLGNFLFTVCMIYGVSLTSATSAGVIMASIPACVAVMSWLFL
HERVAPRTWLAVACAVAGIALFALSGQEHAAPANIGESPENSIYMQWLGYTLLLGASVCEGAYSVIGKKL
TGALGPKRITALINLWGFALSTPLGMYFAWGFDFAAVPWSLWLLLLFYALAACMWTVWLWMTGLKAVPAA
QGGVFTVLLPVSAALVGVLALGERFTPIQLLAFGMALASVVLATLPSRLAWRVRHGGSR
>gi|319763201|ref|YP_004127138.1| swib/mdm2 domain-containing protein [Alicycliphilus denitrificans BC]
MATAKTAPAKKRTPNAAFMKPLTPSPALAAVVGATPLPRTEIISKLWVYIKANNLQDAANKRMINADAKL
KEVFGKPQVSMFEMAGLIGKHVK
>gi|319763202|ref|YP_004127139.1| bfd domain protein (2fe-2S)-binding domain protein [Alicycliphilus denitrificans BC]
MIVCVCHRVSDREIARHARAGMSFDEIQFELGVATQCGNCEDCARDIVAQCCASQPVAALHKEVGASDVQ
LAKACQEGTSCNCSRHSLQV
>gi|319763203|ref|YP_004127140.1| tonb family protein [Alicycliphilus denitrificans BC]
MIAGSVVLLHAAGLWALQSGLMRQAAEIIIPAEVLSEFLTPAPPAAPPAPPVPQPHKPTPAPPKPTPPKP
RPAPTPAPMPLAIADPTPAPAAPVGVVQQQPAAAPVEAAPAPAPAAPAAPPGPAIIQPSSDASHLNNPKP
VYPAVSKRLGEQGKIVLRVLIGTDGLPQKIEIKQSSGYERLDRQAVDTVSRWRFVPGTRNGVPEAMWYLQ
PINFVLQQ
>gi|319763204|ref|YP_004127141.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
MESHFGIANVWIQGDFVTRAVAVLLLGMSLASWIVIIIKALDIVRYKKHARQARDFWHSEDFAAGLTKLG
ADPANPFRHLALEGREATAHHRNTQAHLHDSLDVSDWVTRCLRNCIDEFTARLQSGLAILASVGSTAPFI
GLFGTVWGIYHALVAIGASGQSTIDKVAGPIGEALIMTALGLAVAIPAVLGYNALVRGNKSVLSSLNSFA
HDLHAYFVTGARVTVQGDAAAKVLPIKKG
>gi|319763205|ref|YP_004127142.1| biopolymer transport protein exbd/tolr [Alicycliphilus denitrificans BC]
MAFGTQDDTDEVMNEINMTPLVDVMLVLLIIFIITVPVMKHAVPVDLPRASNEREVVKPETIRLSVTADG
KYFWNESGISDEELEPRLQAEARKNPQPDLHIRGDKDVRYERVAQAMSAAQRAGVRKIGFVTDPAQ
>gi|319763206|ref|YP_004127143.1| hemin uptake protein hemp [Alicycliphilus denitrificans BC]
MHAELTIPSAPTASHLRNTGNAAVGYFNSPADMHAGGMAVDSKTLLRGHKAVTIVHNGASYRLQATKLGK
LILTK
>gi|319763207|ref|YP_004127144.1| hypothetical protein Alide_2524 [Alicycliphilus denitrificans BC]
MKTKPELELADVKLIAAAAEAEALKNQWAVTIAIVDDGGHLLWLQRLDGAAAISAHIAPAKAHAAALGRR
ESKGYEDMINGGRTAFLSAPTMQGLLEGGVPVMKDGRCLGAVGVSGVKSSEDAQIARAGIAAIGL
>gi|319763208|ref|YP_004127145.1| hypothetical protein Alide_2525 [Alicycliphilus denitrificans BC]
MNTEITSIGSGYALSQEQRHRVLRNTYWLLALSLVPTVLGAWLGVATGITESLRGGMGLIVFLGGAFGFM
FAIEKTKNSAAGVAVLLGFTFFMGLMLSRLIGMVLGFKNGADLIMTAFAGTAGVFFVMASLASVIKRDLS
GMGKWLFVGALVLMVGAIVNVFVGSSAGMMAISVAAIGIFSAYMLYDLKQILDGGETNYISATLALYLDL
FNVFQSLLALLGIMGGERD
>gi|319763209|ref|YP_004127146.1| regulatory protein marr [Alicycliphilus denitrificans BC]
METESRRNRLLAGKPQPLRDRVAASRELLHAAHLLERRINAALAPCGLHMHEYLALRLLSDSVHEPLRPT
SLSMALDATRTQITRLLDGLEKKALIARALHKHDRRSLEITLTPAGAERLEQAVPLVQAAYASAWEPLTG
DEIHALALQLAQVHAHLRGTGLPEDAP
>gi|319763210|ref|YP_004127147.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MNAPQLQQWLHRRKQRLLIVLICGLVGVEFLESGMFVFAAAPIMRAIGAAPQEFALVQMAYAVGNMFMVA
TQQWMVRHFGYRRYLLLALLLFGLGDVGSALASNLPEMIVARLLQGMGGGAFFLSTRVLIPLLFSVPMRP
LASRGFLLTIFGMGVMAPALAALLVGGGGWQWIFWVQLPIVVLLAAGVQRFMPRHLGKSIQPIRWSAIPV
VLFLLAVGLVQWVFSEADHELLQRPDKLALVALAGVTLLGLFSLHQWRHDEPLLHLRDLTHPGFLAGMGL
FATYYFIVNFNNYLFPQYAEHGLGLPVVTTGWLNSFSGGVTFVAVVLYSRYSARVANKRAMMMIGCLCMA
VSAWWMASLPPDAPVAALYGPLAIKGLFGVLMILPVSALTWRALGDTHFAKGYQAKNVMRQMMISLASAV
AAVALQNGRTAQLTRLPAGSGHLDMQAVFLAGQHLYLWITAMAVAAAVVVAAQKQLR
>gi|319763211|ref|YP_004127148.1| hypothetical protein Alide_2528 [Alicycliphilus denitrificans BC]
MLPPRPRLAAGLRAAFAAAALLALAGCEIPGLGPDPRIAQREAEAKAIGGACRHALRGLEDCFTLNPKAS
KAMVFAGWKEMDQYMRENKIEGAPSVLTQLEKKPAAAPARSGEDNAEPQPRSSRNRG
>gi|319763212|ref|YP_004127149.1| small multidrug resistance protein [Alicycliphilus denitrificans BC]
MHPYILLGISIAAEVVATTALKSSQGLTRLWPAVLAVLGYCVAFYLVSKVMNHMATGVVYAVWSGLGIVL
ISLVGWLLHGQKLDLPAIVGMAMIVGGVLVMQLLSKTTGH
>gi|319763213|ref|YP_004127150.1| chromate transporter [Alicycliphilus denitrificans BC]
MPTASIDTSSIGERPRPHSLRELFWAFTWLALQGFGGVLAVVQRELVDRRRWMTNEEFMEDWAAAQILPG
PNVVNLSIMVGDRHFGARGALVAVVGMLLLPMLLVVAVAAVYAVFATHPMVVGALRGMGAVAAGLVAGVG
CRLAASLGRHPLGPLPCGLIVVATFATMSVLRLPLAWVLPVVGGAACVLTWRKLPA
>gi|319763214|ref|YP_004127151.1| chromate transporter [Alicycliphilus denitrificans BC]
MATALNLQPVDWLNLFLYYLSISLLAVGGAIATAPDMHRFLVERQGWLTDVQFNTSIVIAQSAPGPNVLF
IALLGWNVGLNTGDGTHMAWAAGALGVAVCMVGIMLPSSLLTWAATRWAHRNRERRSVRAFKQGMAPLVI
GLILATAWVLGSAHGDPARDWPLWLLSAVTTLLVWRTRIHLLWLLSAGALLGALGWV
>gi|319763215|ref|YP_004127152.1| silent information regulator protein sir2 [Alicycliphilus denitrificans BC]
MRDNPSTALDEARAWLRDARRVAVLTGAGVSAESGVPTFRDAQTGLWARFRPEDLATEQAFRRNPGRVWD
WYAERREKLLGVQPNAGHHALAAFARRAPGRLTLITQNVDGLHQLAGSEGVLCLHGRLADDRWLDHPRPC
CDLARAVPDRPPRCAGCGNLVRPGVVWFGEALPTQALDAAQQAVQACDVMLVVGTAGAVYPAAGLAHQAR
QAGARVVVLNVGPSELDGIAHAVLRGPSAQLLPALLDVSFHFSINRVREGEAQTVRPVRQAKPTK
>gi|319763216|ref|YP_004127153.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MPNEDSSPVRSTYRHGDLRRALLDAGVALAREGGPGAVVLREATRRAGVVPNAAYRHFQSHQVLLEAVRA
VALSELARAIEAEIDATRRMRDPRRRARAAFCGVGLGYLRFARREPGLFRTAFAARPFDVNERAPHDGAA
RGASGMDPFELLCHTLDGMVDAGLLPPVRRPGAEFLAWSAVHGMAMLVLDGPLRGLDEAGCQALAERLVA
MVEQGLLAEKV
>gi|319763217|ref|YP_004127154.1| hypothetical protein Alide_2534 [Alicycliphilus denitrificans BC]
MKSDSYVDGFLLAVPTANKEAYRRLATEAAQLFKEHGATEFVECWGDDVPEGKLTSMPMAVQRKDDETVV
FSWVAWPSRAARDAGMKAFMDDPRCPKDMPFDGKRLIYGGFRVLVSA
>gi|319763218|ref|YP_004127155.1| glutathione-dependent formaldehyde-activating gfa [Alicycliphilus denitrificans BC]
MQYKASCHCGKVAMEFEGDIQEVVSCNCSICQRKGTLLWFMPRGELKLISPDDAASTYQFHKHAIRHRFC
PTCGIHPYAEGVDPKGRPMAAINVRCVHDIDLASLSVKHFDGRSL
>gi|319763219|ref|YP_004127156.1| 3-demethylubiquinone-9 3-methyltransferase [Alicycliphilus denitrificans BC]
MQFTPYLNFDGNCAEAFAFYARLFGGTIVHQSTFGEMPASEGMPKLPESARNRIMHVHLQIEGQSLMGSD
TMPAVPGQDPALCGGGYQLPQGLWVSIQAADAAEGQRLFDALGNGGQVVMPYAATFWSPGFGMVRDRFGT
PWMVNVTAQH
>gi|319763220|ref|YP_004127157.1| activator of hsp90 atpase 1 family protein [Alicycliphilus denitrificans BC]
MSDRTVHLHRVLRARPEKVYRAFLEADAMAKWLPPHGFTCKVHHLEARAGGTFRMSFHNFGTGHGHSFSG
EYLELVPDALIRYTDRFDDPNLPGVLEVTVRLKPVVCGTELSIAQAGIPQAIPLEMCYLGWQESLAQLAA
LVEPDIPD
>gi|319763221|ref|YP_004127158.1| 3-demethylubiquinone-9 3-methyltransferase [Alicycliphilus denitrificans BC]
MMKPAKNTICLWYDGGAEEAARFYARTFPDSSIGAIHHAPGDFPSGKQGNVLTVEFTVMGIPCLGLNGGP
AFKHSEAFSFQIATSDQAETDRYWDAIVGNGGEESVCGWCRDKWGISWQITPVALTEAVTGPDRAAAKRA
FDAMMQMRKIDIAAIEAARRG
>gi|319763222|ref|YP_004127159.1| hypothetical protein Alide_2539 [Alicycliphilus denitrificans BC]
MKPNPVVWFEIYVQDMERARRFYETVFQCTLQPLAAPAELDGGLQMLSFPGDMSTMGASGALVKMEGAPS
DGGTLVYFACDDCAVEQGRAEAAGGQVSKPKFSIAPHGHIALVIDTEGNCIGLHSMQ
>gi|319763223|ref|YP_004127160.1| activator of hsp90 atpase 1 family protein [Alicycliphilus denitrificans BC]
MSPAASNEIRTLCTTRVLAASPAAVFGAIADWRLISRWWGPAGFRSTFHTFDFRPGGRWIHTLHGPDGTD
YANECRFTEIVACQRVVIEHTSAPWFELALTLAPQDGGTRIGWRQTFADAETCARLAPVCVPGNEQNLDR
LAAVLADLAARR
>gi|319763224|ref|YP_004127161.1| RNA methyltransferase, trmh family, group 3 [Alicycliphilus denitrificans BC]
MSSPKILFGFHAVGVRLKTAPQSIIEVYYEATRRDARMRQFLARAKEAGVRLIEADGLRLAKLAGSHGHQ
GVAARVQAVAQLHSLDDLLDQLEADGVANPLLLVLDGVTDPHNLGACLRVADGAGAHAVIAPKDHAVGIS
ATVAKVASGAAETVPYFMVTNLARTLGELKERNIWVIGTSGDADKTLYQVDLKGPVALVLGAEGPGMRQL
TRKTCDELVSIPMKGAVESLNVSVASAVCLYEALRQRG
>gi|319763225|ref|YP_004127162.1| sodium:dicarboxylate symporter [Alicycliphilus denitrificans BC]
MILSPLLRRAQRTSLVSQIAIALILGVALSAAWPAATPAVAFLGHLFISALKAIAPVLVFVLVVAAIGNH
RPGENTHMRPILLLYAIGTLAAAAVGVAASMWFPSTLALKGAAQAQAAPGAVSEVLLNVVGSIVANPVKA
LQDANYIGILAWAVALGVALRHASESTREMLQDGAQAVTRIIQWVIRCAPLGILGLVATTLAEAGAQALW
GYAQLLAVLLGCMLFMALVVNPLIVFLTIRRNPYPLVLTCLRESGVTAFFTRSSAANIPINLALAKRLNL
SEETYSIAIPLGATINMAGAAITISVLSLAAAHTLDIHVDVPTALLLCLVASVCACGASGVAGGSLLLIP
LACSLFGIGNDMAMQVVGVGFIIGVLQDSAETALNSSTDVLFTAAACMAPRRA
>gi|319763226|ref|YP_004127163.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MSEPFAAAATTTASESPVPPEPIIAVEHVYKSVTDSTGTLEILRDIDFRLAPQETAAIVGASGSGKSTLL
SIIAGLDTPTRGTVLLAGQDLFALDEDERAALRARQVGFVFQSFQLLGNLTALENVMLPLELAGSRDARR
RATEMLGRVGLGQRLSHYPKVLSGGEQQRVALARAFVVEPAVLLADEPTGSLDFATGETIMELMFALNRE
QGTTLVLVTHDRAIAARCDRRITIEAGRLV
>gi|319763227|ref|YP_004127164.1| arylesterase [Alicycliphilus denitrificans BC]
MRMFRRDFIAAGALALLGTAPALAQQSRKAAARAPVILVVGDSLSAEYGLPRGSGWVALLEKRLAQEKIG
ATVVNASVSGDTTAGGRARLPALLRQHGPTHVVIELGANDALRGLPLTNTRDNLAWMVEQSQAAGARVLL
VGMQMPPNYGADYARRFAALFEAVAKERKVPLVPFLLHGIADVPDSTALFQPDRIHPRAEAHPRMLDNVW
PQLRKLL
>gi|319763228|ref|YP_004127165.1| hypothetical protein Alide_2545 [Alicycliphilus denitrificans BC]
MTDSPAPVSASAPAAPLVLTPLGWRDPFRWLARGLRDVAAAPGIALFYGGCFWLMALVLGWVFRASPEYT
MSLVSGCLLVGPFLAMGLYETSRRRELGLPPQLGESITCWDSHMGSMGMLVLVLVVLELLWGRASLVVFA
VFFNTGMPSTTGVVQAIFSPGNWQFIVVYLLVGGVFAALVFSSTVVSIPMILDRDTDALTAGIASVRVVL
ENPGVMLLWGALITALVVLSLWWTWGAGLLVVGPVLGHASWHAYRAAVAAPRAAEPAVSAPPQDGA
>gi|319763229|ref|YP_004127166.1| cys/met metabolism pyridoxal-phosphate-dependent protein [Alicycliphilus denitrificans BC]
MTQPPAPDLRTRLIHHDYRPPAGFEAPQPAVHKASTVIFPNVAAMRAREWKDKSSYTYGLHGTPTTYQLE
ERLATLEGGRQCLLAPSGLAAIATVSLALLRHGDEVLIPDNAYGPNKALAEVELRHYGIRHQVYDPLDPA
DLAARITDATRLVWLEAPGSVTLEFPDLPEQVRICRARGVTTALDNTWGAGLAFAPFDLAGDGQLGVDIS
VHALTKYPSGGGDVLMGSITTRDEALHLRMKLTHMRLGLGVGANDVEAVLRSLPSMALRYRAHDAAARAL
AQWMGTKAPVAQVLHPALPGSPGHEHWRALCGSAGGPEGAAAGLFSVVIDARHTQAQVDAFCDGLRLFRL
GYSWGGPMSLVVPYDLPGMRERATPHLEAGTVVRFAVGLEAVEDLRQDLAQAMERAFAG
>gi|319763230|ref|YP_004127167.1| transport-associated protein [Alicycliphilus denitrificans BC]
MDSTRSNPSMLRWTGLAAALAVALGLAGCNKTEEQTAGQRVDEAINKTEQAAQEAKKKAETAAGEMGDAT
RRAAAGAAALVDDAAITAKVKAGLAQDMDLGALKIDVDTSAGVVTLKGEVKSEQARERASQIAQAVSGVS
SVENKLTVSGG
>gi|319763231|ref|YP_004127168.1| sulphate transporter [Alicycliphilus denitrificans BC]
MSIPVLHRWLPFLAWPRPTAALLQGEFWAGMTVGLMLVPQGVAYAALAGMPLVTGIYASLVPALVAVLWS
SSTRLGVGPTALTSLLIGASLTGMAEPGSAQWVALAVWMALLSGLLQLVLGVVRFGWLLNLVTSPVLGGF
TQAAALLILASQLPALLGLRTSWHALAESPSPHHFDFTALAFGLGSLALLVLARRWRPSFPAAIVVIALA
AFVSWAMGYADADGAVIGHLPSGLPSPYWPGWLSWDDMGALVMPVMVITLVSFLETASSAKVEHQQGGTR
WNENQDLIAHGMAKISSGLCGSFATSASFSRSAINLYAGAKTGWATLFALLLVLATLLWLTPALYHVPQS
VLAAVVVAAITNLIKPGTMFRLWRISRVETAIGLATFGLTLATAPRMYWGVLVGLLMNLSHFLYQRLHPR
IIEVGLHPDGSLRDRHLWQIAPLAPRVLALRMDAELDFASANALERRVADELAQRSDIQHLCLFALPINR
IDVTGVEAFMRLRALLQSHGGMLHVSGIKLPVQRTLENAGALAPGPNFITYRTDAEAIAALQQTAAENSP
A
>gi|319763232|ref|YP_004127169.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MTDLASSASVRLRDLSLATAHALVAQSLGSEAALYEQSPALYLQNLINGLCELSLKDPLTGLPNRRHVHG
VLERELDRVARSGEAALLLMLDIDHFKQVNDCHGHLAGDIVLQSVARTLESCVRPMDTVSRYGGEEFAIV
LPACQFGFGRVVAERVRRAIESTPVYVSPSLTLNVTVSIGGAFALQWIRSTTALWTDRADAELYKAKLSG
RNRVSIEDQPDSSVSAEEKSLLFGPLYTPTGWGDLPPPLDPSPSSAY
>gi|319763233|ref|YP_004127170.1| cobyrinic acid ac-diamide synthase [Alicycliphilus denitrificans BC]
MTDALSPQPTPSAGATAPATAPTPVAAAPVDARIIAVTSGKGGVGKTFVSANLAAALTRRGLRVLVLDAD
LGLANLDVVLNLHPKTTLHDVFTGKAQLEDAVIKAPGGFSVVLAGSGMVEYSRLTPEVRNEFFNVIQTLA
PQYDVVLLDTGAGISDVVLFSVSLAQEVLIVATPEPTSLTDAYAAIKVLATQQKRQHVRMVVNQAARAGD
GRAITGQLQQVLDRFVTTDSGRPVRLIHMGDIPADSSVREAVMRRQLLMLQMPGCPAALAVAQLANKLES
TLLKPAGNP
>gi|319763234|ref|YP_004127171.1| propionate/CoA ligase [Alicycliphilus denitrificans BC]
MAAEHSNYADFYRRSIDERDAFWAEQARLIDWHRSPETICDYGNPPFARWFPDGTTNLCHNAVDRHLAAR
AQQNALVAISTETNTERAYTYAELHQEVQRMAAVLQALGVKQGDRVLIYMPMIAEAAFAMLACARIGAIH
SVVFGGFASSSLASRIEDAEPVVIVSADAGSRGGKVVPYKPLLDEAIDLSAHKPAAVLMVDRGMAPAAMR
AGRDHDWAALRAQHLDAQVPCAWVQAAHPSYTLYTSGTTGKPKGVQRDTGGYTVALAASMRHIFQANAGD
TYFCTSDIGWVVGHSYIIYGPLIAGMTTILYEGLPIRPDAGIWWSIVEKYKVTHMFSAPTAVRVLKKQDP
EYLKKYDIGSLKALWLAGEPLDEPTATWISGALQVPIIDNYWQTETGWPILTLCNGVQQQASRFGSPGKA
VYGYNVKLIDEATGEELTAPNQKGVVAIEGPLPPGCLQTVWRNDERFVNTYWKSIPGRLIYSTFDWGIRD
EDGYYFILGRTDDVINVAGHRLGTREIEECIAGHPNIAEVAVVGVADQLKGQVAMAFAVPRDASGLTDAA
ARLKLEGEVMKQVDGQLGAVARPARVLFVTQLPKTRSGKLLRRALQAVAERRDTGDLTTMEDPTALQQIK
DLLG
>gi|319763235|ref|YP_004127172.1| isochorismatase hydrolase [Alicycliphilus denitrificans BC]
MLLDASESQLVLVDYQERLMPAIFEGAAVLANARRLARIAQLVDVPVWGTEQNPSRLGPNDAELRALCRR
TLAKMHFSAAEEGLGEWLRPAPKPQGGNARSLPKHLQKAREQQQAPERASIVIAGCEAHVCLLQTALQLI
EDEFDVWVVTDACSSRTERNRDAAFDRLAGAGAELVTTEMVAFEWLRGCEHPAFKDMLGLVK
>gi|319763236|ref|YP_004127173.1| nhl repeat containing protein [Alicycliphilus denitrificans BC]
MLASSGAHAQDGAPVQPVAARSRASAEVVASGLEHPWGLAFLPGGRFLVTERPGRLRVVEPGGRLGPPLA
GLPQVAAGGQGGLLDVITDADFARNRRIFFCYSEPAPEGRGNGTALASATLAPDAPALQDVKVLFSQSPK
VASQLHFGCRIVQAPDGNLFLTLGERFSRKDDAQRLDGHLGKVVRLAPKGGAAPGNPLAGRAGALPEIWS
WGHRNPQGATWGPDGRLWIHEHGPQGGDEINRPEPGRNYGWPVITYGENYGGGRIGEGTAKAGMEQPLHY
WVPSIAPSGMAFLTSDRYGAAWKGSLFVGSLKFARLHRLELRDARVVRDEYLLDGLGARIRDVRQGPDGW
LYLLTDSPDGQLLRLKP
>gi|319763237|ref|YP_004127174.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MDWDNLRYFLELARTGTLAAAARRTGVEHTTVARRIQALEKQMGAPLFAREAAGHRLTEAGRHLLPAVEA
MEAAVLGVERASPANASAAGPSGLVRVGATEGFGTLILAPHLARLTQRHPHLSIDLLALPRMLHLSRREA
DIVISLERPKRGSVIVTRLADYTLRLYGQREYLARRPLVATREDLRHHAFISYVDDLLFTKELQFLDQLY
PPERFALRSTSITAQYEAVRAGAGLAVLPAFLADRDPILARVLPHEAAFTRTFWMSMPAEAKHLARMQAV
WAFLKEVGQKEAGLLVPDAPHKPG
>gi|319763238|ref|YP_004127175.1| methylmalonate-semialdehyde dehydrogenase [Alicycliphilus denitrificans BC]
MDASTAVQAPTVKLLINGQMVESKTTQWRNVVNPATQEVLARVPFATPDEVNAAVANAKEAFKTWRKTPI
GTRARIFLKLQQLIRENMKELAALLTAEQGKTLPDAEGDVFRGLEVVEHAAAIGNLQLGELANNVASGVD
TYTVLQPLGVCAGITPFNFPAMIPLWMFPMAIATGNTFVLKPSEQDPMVTMRLCELALEAGIPPGVLNVV
HGGEDVVNAICDHPDIKAISFVGSTRVGTHVYNRASLAGKRVQCMMGAKNHAIVMPDANKEQSINAILGA
SFGAAGQRCMAISVVLLVGEAQKWLPDFVEKAKGLKVSAGTTPGADLGPLISCAARERVEGLIARGVQEG
AKLELDGRNPGIAGFEKGNFVGPTIFSGVKPGMSIYDQEVFGPVLCVVAADDLEQAIEFINANPNGNGTA
IFTQSGAAARMFQEDIDVGQVGINLPVPVPVPLFSFTGSRASKLGDLGPYGKQVVLFYTQTKTVTERWFD
DSTLHHGVNTTISLK
>gi|319763239|ref|YP_004127176.1| hypothetical protein Alide_2556 [Alicycliphilus denitrificans BC]
MTGPRAAALALALCLGGTTAWAQAGGACRPGGSVEETNACAVRDYQEADTALQILYGDVMRALSAHERPA
LRQDHLAWQRARITQCKQAQRAQEQRPEWPRLYHECLVAQTRARRQALMHWLHHGEAPPHNE
>gi|319763240|ref|YP_004127177.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDFELSEDQRAFADTARQFAQAELAPHAARWDAEGIFPVEAIAKAGELGFCGLYAPESVGGLQLPRLDAT
LVFEELAAVDPSTTAFITIHNMATWMLGTWAQDAVRAEWGEALTSGRKLASYCLTEPGSGSDAASIKTRA
ELVGGEYVINGGKAFISGAGSTHVLVLMARTGDAQSGAAGISAFAVPADLPGIHYGKKEEKMGWNSQPTR
QISFDNVRIPAQNLLGREGEGFKIAMKGLDGGRINIATCSVGAAQGALAHAQRYMQERKQFGKPIASFQA
LQFKLADMATELVAARQMVRLAASKLDAGARDASTYCAMAKRFATDAGFNVVNEALQLHGGYGYIREYPL
ERLLRDARVHQILEGTNEIMRVIIGRRMLDGDAPDAVR
>gi|319763241|ref|YP_004127178.1| hypothetical protein Alide_2558 [Alicycliphilus denitrificans BC]
MPARPLSDETLHLIAAVQDALAERLDARARVEERQLFGSHAFMVDGKLCLAVKGDELLVRLPPPQHAAIA
ETPGLRELDPRGGMSGYFWVTPAAYATRAQWRHWIDAALAYNPQARATPRRSAPPPSR
>gi|319763242|ref|YP_004127179.1| 3-hydroxyisobutyrate dehydrogenase [Alicycliphilus denitrificans BC]
MQIAFIGLGHMGAPMAINLHKAGHAIKAFDLSADACAQVKAQGLQVAASAQDAVQGAEAVISMLPASQHV
EGLYLGKDGQGGLLQHIAKGTLVIDSSTIAAATSQKAAKAAEAAGIAFIDAPVSGGTGGAIAGTLTFMVG
GSDANLERARPLLEKMGKNIFHAGAVGAGQTAKICNNMLLGILMIGTSEAISLGVANGLDPKVLSEIMRR
SSGGNWALEVYNPYPGVQEASAATRGYTGGFGTDLMLKDLGLAQENATAVKASTPLGGLARALYAAHSLA
GHGGEDFSSVIKMLQKKG
>gi|319763243|ref|YP_004127180.1| methyltransferase fkbm family [Alicycliphilus denitrificans BC]
MPINNIGVNLLLLYMRRFPLEAGKWRFSQWLNERTHKIETVARTSYCFLMHLNTRDFIQHTIFVTGRWDD
DVGRVILSRLKTDDVFVDIGANVGYFSLLASQICSKVISFEPNPTCLAQLNRNIEINKRQNIDVRPVGLA
DKRGIAEFHVANASNIGGGSLREGSGEKFSVHLDTLDSQLSAQPIRLIKIDIEGAEVLALKGASAILSRP
DAPDVICEISENTLQQLGSSKEELFRLMSSHGYKNKIISPIRKSNLTDEVPFFQYDALFYKDGAGQN
>gi|319763244|ref|YP_004127181.1| hypothetical protein Alide_2561 [Alicycliphilus denitrificans BC]
MHLKPYESVDGVPFTAMREDIVRARGRPRSEERNGVGLTALDYGGVVYRFQDGGRLEEITARARALHLGT
VAVPFASLAAFVRAGDDAAFERAGFLVSPRYGIAFVPGESCWVTALARHCLPQWEAMGA
>gi|319763245|ref|YP_004127182.1| tryptophan synthase, beta subunit [Alicycliphilus denitrificans BC]
MTASTDFAPMPDAQGFFGPYGGQLVPPHLKQAMDDINAAYAEITRRQDFQDELAQLFADYVGRPSPIFHA
RRLSEQLGGAQIHLKREDLNHTGAHKINHCLGEALLAKFMGKKKVIAETGAGQHGVALATACALVGIPCE
IHMGQVDIEKEHPNVTKMRILGCKLVAVTRGAATLKEAVDSAFEEYLTNPTDYLYAIGSVVGPHPFPMMV
RDFQSIVGREAREQFQARHGRLPDYVAACVGGGSNAMGIFTAFLNDTGVKLVGVEPSGEGTDKPGRHAAT
LSMGKPGEIHGMKCYVLEDAAGQPAAVHSIASGLDYPGVGPQHSYLKDIGRVQYEAVTDKECLEAFMTLS
RVEGIIPALESAHAVAWAMRVAPGLPKDQHILVNLSGRGDKDADYVAKVLGI
>gi|319763246|ref|YP_004127183.1| hypothetical protein Alide_2563 [Alicycliphilus denitrificans BC]
MALPPNKERSRRLRKKMRVGEFQEFGFEYELKVRQALAPEQEEALMDRFVRELLVPRNLAAAGWVREGFV
TAFARGSATEDDRQATQAWLAAQPEVAEATVSALKDAWYVED
>gi|319763247|ref|YP_004127184.1| galactarate dehydratase [Alicycliphilus denitrificans BC]
MNTQAPLSITMHPADNVAIVANDGGLPAGAVLPGGLVLLDRVPQAHKVALVDIPEGGAVRRYNVVIGYAL
RPIPAGSWVHERLLRMPDARALDGLPIATIRPAPQEPLAGYTFEGYRNADGSVGTRNILAITQTVQCVAG
VTAFAVQRIKAELLPRYPHVDDVVALEHGYGCGVAIDAPDAAVPIRTLRNISLNPNFGGELMVVSLGCEK
LQPERLLPPGSIPLVDERNVADVGASADSVLDVVCLQDEAHVGFMSMVESILRQAEAHLARLNARRRETV
PASALVVGVQCGGSDAFSGVTANPAVGLCADLLVRAGATVMFSEVTEVRDGIDQLTARAATPEVAQALID
QMAWYDAYLARGRVDRSANTTPGNKKGGLSNIVEKAMGSIVKSGSAPISGVVAPGERAARKGLLYAATPA
SDFICGTLQLAAGMNLHVFTTGRGTPYGLAACPVIKVATRSDLARRWHDLMDVNAGRIADGEASIEDVGW
ELFHLMLDVASGRKKTWAEQWKLHNQLVLFNPAPVT
>gi|319763248|ref|YP_004127185.1| hypothetical protein Alide_2565 [Alicycliphilus denitrificans BC]
MQRRTFIHHTLAASAALLGGSQAMPAMAQAPWPTGKAITYVVPFPPGGNTDTLARVIAQPLSQALGTPVV
IDNKGGAGGSIGSALAARAPADGYTILGGTISSHAINVSLYANLDYDPVKSFSPVAMLGSGPLVLVVPAA
SPYKTLADVLAASKAKAAAGGLSSASPGTGTSPHMALELLAYQSGVKFTHVPYKGSGPAVQDVIGGQVDM
MFDTTLIVGPHIQSGKLRPIAVTSSRRLESLPDVPTIAEAGQKGFDMGSWQAVFAPAGTPKAIVDRLHAE
IMKIVATPEVQARLKSFGMIPSTMTPAELGAYQKAEVAKWAQVIKAAGIKAD
>gi|319763249|ref|YP_004127186.1| mandelate racemase/muconate lactonizing protein [Alicycliphilus denitrificans BC]
MTTSHAIRHIRITPIAFRDPPLLNAAGIHEPWALRSIIEIETASGLVGINESYGDQPMLDALAKAAPALQ
GLSPWALNEMERRVAALVAPPAQTASEFLGRQVSLAPGTHVSKTVAKVVSAFEVAMLDLQGQLARAPVVD
LLGGAAREAVPFSAYLFYKYAEHIDKPYAPDAWGEALTPEQLVAQARRMIGQYGFQSIKLKAGALPPGQE
AAGILALAEAFPGTPLRIDPNGNWTVETSLKIVRQLRGVLEYYEDPAPSLDGMAAVARECDVPLATNMVV
TDFAEFRRNAEMGCPVKIVLSDHHYWGGLRATQRLSTLCKTFDLGLSMHSNSHLGISLVAMAHLCASVPL
LTYACDTHYPWQDEEVVEGGRLRFEQGSLRVPTAPGLGVTLEREALARLHDNYLRCGIRNRDDLAQMRKY
DPAFTGQQPRF
>gi|319763250|ref|YP_004127187.1| gntr domain protein [Alicycliphilus denitrificans BC]
MSSDDLQQIIMADMNTPSTGLPESPPSTATPTPSLRGRAGRGGGRSLANLLSEEFENKIRQGLLREGDKL
PTESELVRDYDVSRTVVREALSKLQAAGLVETRHGIGTFVLPARDGAGLTLDARELSESVDVLAVLELRI
SLETEAAGLAAQRRSSEHLQALRDALQAFERHAASGGDTVTHDLAFHLGIAQATGNRYFRDILAHFGALL
VPRTRITSLQAPTHAPDYLRRVNREHEEIYNAIERQDADSARAAMRIHLTNSRERLRLAQRASTPS
>gi|319763251|ref|YP_004127188.1| hypothetical protein Alide_2568 [Alicycliphilus denitrificans BC]
MPRNPLTRRAAAIALAGLCAAALPLGVQAAGQWPSRPLKIVVPYPPGGSSDIIARSISQHLSEALGQPVI
VDNKPGANGNLGADFVAKAAPDGYTLLLCDLGALAISPSVYTRLAFDPSKDLRGTAMLAYSPHLLVVHPS
VKANNLKELVELSKTSDLNFAVTATGSAPHLAGVELARATGAKWVYVPYKGGVQSVQDTVAGQTQVLMNG
MLATYPHVQSGKLKLLGVSKRERMPLIGSVPTIAEQGVPGYETGTWQGVMLPAGTPPAIVKRLGETLVAA
IRNPEVRARLAGQGAEVVTMSPAEVDRFFAAERARWSKVVQQEKLQLD
>gi|319763252|ref|YP_004127189.1| 5-dehydro-4-deoxyglucarate dehydratase [Alicycliphilus denitrificans BC]
MTPQDLKNVMGSGLLSFPITDFDANGDFDAKSYAARLEWLAPFGASALFAAGGTGEYFSLTAGEYPAIIR
TAVDTCRGKVPIIAGAGGPTRFAIECAQAAEKAGAHGILLMPHYMTEASQEGLAAHVEAVCKSVDFGVII
YNRGVSRYTPETVARLCERNPNLVGFKDGVGDIEGMASMFLAMGDRLAYLGGLPTAEVYAAAYKALGTPV
YSSAVFNFIPRTAMRFYEAVKNDDQATQHQLLKDFFMPYLKIRNRSAGYAVSIIKAGARIVGHPAGPVRP
PLADLRPDEVEMLAALIRKVEPV
>gi|319763253|ref|YP_004127190.1| hypothetical protein Alide_2570 [Alicycliphilus denitrificans BC]
MKKILMALAASVALSAAAAWPEKSVNVIVPFPAGGSTDTIARAMAQHMGEKLGQPFVVDNRPGATGTIGA
TAVKRAAPDGYTLLVASLGPFVIAPHLVKNIPYDAVKDFDYISLPVQAPNVLVASPAQKARTVADVIAAL
KAQPGKISFASSGNGSSDHLSAELFWQQSGTSGLHIPYKGGAPAINDLLGGQVDFSFQNVNAVLAHIRAG
KLHAIAVTGDRRSPVLPDVPTLAEAGVKGAEIYSWQGLAAPRGLPAEVKKKLADAAIQAISEPALKKRLT
EQGMEIVANTPEEFAAFQAREYARWKTLIEARRITAD
>gi|319763254|ref|YP_004127191.1| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MTQRPPRILQYGRMPLPALDRELAERYDVAVLSEQADPARFLAGHGATFDCVVTSAAMGLPAHVVDALPH
LRYVSSFGVGFDALDRQALLRRGARVGYTPGVLDDCVADMAFALLLDAARGLSTADRFVRRGGWSRQRFG
IHTRASGKRLGIFGMGRIGSAVARRAAGFDMQVAYHNRRPVEGSPHRYLPSLLELARWADFLVVTTAGGE
GTRHLVNAEVLDALGPNGFLVNVARGSVVHEAALAAALQGGRIAGAGLDVFEDEPRPLPALLALDNVVLA
PHIASGTHETRRAMADLVLANLAHCLATGRPVAEVPWSAEAAAGRQAQAA
>gi|319763255|ref|YP_004127192.1| glucarate dehydratase [Alicycliphilus denitrificans BC]
MTQTPTITDIEVIPVAGRDGMLMNLSGAHAPFFTRNVVLIHDSAGRTGVGEVPGGEGIRQALEDSRRVLV
GQSIGQRLQLLQQVQKNLEGRDAGGRGLQTFDLRIGVHAVTAVESALLDLLGQHLGVPVAALLGEGQQRE
RVEMLGYLFFVGPSDRTGLPYVKPGEDKSGSDDWTQVRHKEAMTPDAIVRQAEAAHARYGFNDFKLKGGV
LAGEQEVEAAAALARRFPQARVTLDPNGGWLLKDAIRLMRDMRGVLAYAEDPCGAEGGFSGREVMAEFRR
ATGLPTATNMIATDWRQMVHALALQSVDIPLADPHFWTMAGSVRVGQTCRDWGLTWGSHSNNHFDISLAM
FTHVAAAVPGKVTAIDTHWIWQDGQFLTQNPLQIKGGFVEVPQAPGLGVTVDRAALKRANALYQEHGLGA
RDDAMAMQSLIPGWTFDNKRPCMVR
>gi|319763256|ref|YP_004127193.1| aldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MTQHHNLIGGQWTPGASCAPNTNPSDLSDVIGEYAQGGADDVQAAVAAATAAFPAWSTSGIQARHDALDK
IGNEILARKEELGDLLAREEGKTRPEAIGEVARAGQIFKFFAGECLRLAGEVLPSVRPNIGVEITREPIG
VVGLITPWNFPIAIPAWKIAPALAYGNCVVLKPADLVPGCAWALAEIIHKSGIPAGVFNLVMGRGRVIGE
ALVNHPGVAAISFTGSVGVGRGIAEACAKSGKKVQLEMGGKNPQIVLDDADLAQAVELSAQSGFYSTGQR
CTASSRLIVTDAIYPAFVEALQARMARIKVGDARAAGTDMGPVVSQAQLEQDLAYVEIAKAEGARLAAGG
ERVACHTGSGRQGFFMAPTLFVDTAPGMRINREEVFGPVASVIRVQDYEEALAVANDTPFGLSAGIATTS
LKHATHFKRHSQAGMVMVNLPTAGVDYHVPFGGRKGSSYGPREQGRYAQEFYTTVKTAYTLA
>gi|319763257|ref|YP_004127194.1| leucyl/phenylalanyl-tRNA/protein transferase [Alicycliphilus denitrificans BC]
MSSSLPWIQSPDGFPHPSRSWDAASPAPGLLAAGGELDVPYLLAAYRQGIFPWFGAGQPILWWSPDPRMV
LHVQEFRLHRSLRRVLQRFRATPGCEVRIDSDFPAVIRACAQTPRAGQDGTWIVPRMVAAYEALHAAGHA
HSVETWVDGRLAGGLYCVALGRAVFGESMFAHATDASKIALAALVCLCRREGVALIDCQQNTGHLASLGA
REIGRAQFLHHVAQARADPPCDWRFEPVYWNELLPPTSAA
>gi|319763258|ref|YP_004127195.1| arginine-tRNA-protein transferase domain protein [Alicycliphilus denitrificans BC]
MTQLNDLPLQSLQFYATAPYPCSYLPQRQARSQVATPSHLIQNAVYSDLVARGFRRSGMFTYRPHCEGCQ
ACIPLRVLADSFRPDRSQRRAWRRHAGLQARVLRLCYMPEHYQLYLRYQTARHAGGGMDHDSIDQYTQFL
LQSRVNSRLVEFREPDADGRPGALKMVSILDVLEDGISAVYTFYEPEEGTSYGTYNVLWQLQQARALGLP
HVYLGYWIEQSPKMNYKARFLPHELLIGEKWQPPAGR
>gi|319763259|ref|YP_004127196.1| pirin domain protein [Alicycliphilus denitrificans BC]
MLTIRKSQDRGHADHGWLNSYHSFSFAGYYDPRHMGWGNLRVINEDRIAPGTGFGTHGHRDMEIISYVLS
GELAHQDSMGNVKGIPPGDVQRMSAGTGVMHSEFNHAQGQATHFLQIWIEPDVRGIAPSYEQVSVPEADK
RGRLRLVASPTGGPGVVRIHADASLHAGLFDGAECATLALEPRRKAYVHLVRGALQVNGMPLQGGDAALL
EGEAQLRLDGGRDAEVLVFDLAP
>gi|319763260|ref|YP_004127197.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MQNTRDALTPDNLAMLQAIAEAGSFAAAARALGLVPSALTYRVRQIEDALDVLLFDRSARQARPTDAGLE
LLREGRRVLEDVDAIANRVRRVATGWEPQLTLSVDGVISPTTMLELVEAFYALGPPTRLKWRDGILSGTA
EALASGHADLAIGVTGSANVAGLQSAPLGELRFIFVVAPHHPLARAPEPISDATLRAHRLVAVADSARRG
NVTMGILAGQDVFTVDNMRAKIQAQLRGLGGGFLPEPMVRPYVEAGHLVVREVVRPARTVPMSYQWGGPG
ATAPGRALQWWLSQLQSPATRRALLENHHHF
>gi|319763261|ref|YP_004127198.1| amine oxidase [Alicycliphilus denitrificans BC]
MTAPRPRSSNRLKHGMPAASVRRFAIVGAGMAGIACARTLAQAGHAVTVFERAPHSGGRTAALASPFGSF
DTGAQYFTVRDARFQRALDTVPGLCRAWSATTIRVLDAAGRVATATRMPGEAHWVAAPTMDALVQAWAEP
LADEGRLHTHTAVTRIERDPMRPTAWQLHCETLGGDTHLHGGFDAVVLAQPAPLARALLQQSGVAAPWGQ
ALDAVDIAPCWTLMLAFAHAVRPGLTTLGPQWNAARSTHHRIAWLARESSKPGRKQIERWTVQASPAWSL
EHLNDDTARVQAKLIKAFAEVTGIHATPTHAEMRRWRYAQTQTPLGRSFLWDAAAGLGACGDWCLGHRLE
DAFVSGLELALAAA
>gi|319763262|ref|YP_004127199.1| glutamate--tRNA ligase [Alicycliphilus denitrificans BC]
MSAGYAGPYIGRFAPSPTGPLHAGSLVAALASWLDARAAGGRWLVRIEDVDRPRCPPGAAERILAQLAAC
GLRPDAPPLRQSGRGARYRQALDELAARRLAYPCACTRRDIEAALAAQGLAHERHVERPYPGTCRQGLRG
RAPRAWRFNATEYQAKMPPAPGSQSPTAPLSIASDGIRWTDRRLGPQFQDVARQVGDFVLLRADGLWAYQ
LAVVVDDADQGVTHIVRGEDLADNTPRQILLQSALGLPTPRYLHTPLVRAADGEKLSKQHGAPPIDDGRP
LQALADAARVLGLPPASGARDADQALALWAGAWARIYNPPL
>gi|319763263|ref|YP_004127200.1| tRNA (guanine-n(7)-)-methyltransferase [Alicycliphilus denitrificans BC]
MGRGLGANLQSAAVTQTPSIQESRPAAPGAAPASIAHPKGIKSYVRRAGRTTSGQAKALEDLGPRYVLDY
APAPLDAATAFGRSAPLVLEIGFGMGEATAHIAGVRPGDNFLCCEVHEPGVGALLKRIGEQGLSNIRILQ
HDAVEVLEHMLAPASLDGVHIFFPDPWHKKRHNKRRLIQPPLVARLADRLKPGGYIHCATDWQPYAEQML
EVLSAEPLLANTAQGYATQPWYRPLTKFENRGMRLGHGVWDLVFTRR
>gi|319763264|ref|YP_004127201.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MKPLLRNLAEMTAHRDHLRLEVSVLSTLLRLGHRVQVRALELFEQDQATMLRPRSWSQDGQIVSSEHDAA
GDPRRLPLADAPELAQCIAAGSESAQRSMPGRHTLWLPVWQAGRSTACLEVTQPRAFTRHQRDVVKGVFL
VYQNYQNLLDYSERDALTGLLNRKTFEEQFARDAGSAPAADGGADLPRPWLAVIDIDHFKSVNDRFGHLY
GDEVLILVANVLRAQCKSQDRIFRFGGEEFVVLLRSVTLAQARQVFERLRAAMQAHAFPQIGHITASIGF
AASQRGSPVEVLGRADQALYHAKESGRNRVCFYDDLVLSGVLQAKIAHDEVDLF
>gi|319763265|ref|YP_004127202.1| alanyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MTTRFSVADIRKTFLDFFAAKGHTVVASSPLVPGNDPTLMFTNSGMVQFKDVFLGTDKRPYVRAASVQTC
LRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESIHWGWELLTQVYKLPPERLLATVYAEDDEAY
DIWTKEIGLPPERVIRIGDNKGGRYKSDNFWMMADTGPCGPCSEIFYDHGPEIPGGPPGSPDEDGDRFIE
IWNHVFMQFDMKEDGSVTPLPAPCVDTGMGLERLAAILQHVHSNYEIDLFDALIKAAARETHTADLANPS
LKVIADHIRATAFLVADGVIPGNEGRGYVQRRIVRRAIRHGYKLGCKTPFFHKLVKDLVQQMGGAYPKLR
EQQERITEVLRVEEERFFETLAHGMEILDGALAGGARQLPGDVAFKLHDTYGFPLDLTCDVCRERGVGVD
EAGFAAAMEHQKSTARAAGKFKMDRALEYGGAANRFTGYEHLSGTAKIVALYADGTSVAALKAGQSGVVV
LDSTPFYAESGGQVGDQGLITAGSARFAVQDTQKIKADVYGHHGVLGEGTLNVGDTVQAQVDGAERAATM
RNHSVTHLMHKALREVLGAHVQQKGSLVNAERTRFDFAHNAPVTAGQIREIECRVNAEILANTATDARVM
DIESAQKTGAVMLFGEKYGETVRVLDIGTSRELCGGTHVQRTGDIGLFKVVAEGGVAAGVRRIEAVTGEN
ALAYLQGLEATVDQAAAALKAPAAELATRIAGALDQIKALEKELAQLKGKLASAQGDELASQAVEVKGIK
VLAAKLDGADAKQLRETMDKLKDKLKTAAIVLAAVDGDKVQLAAGVTADSTARVKAGELVNFVAGQVGGK
GGGKPDMAMAGGTDAEALPQALASVAAWVGERA
>gi|319763266|ref|YP_004127203.1| dihydrodipicolinate synthetase [Alicycliphilus denitrificans BC]
MSNPRWQGVFPAITTKFHPDERIDAEGTARHIDFQIRNGIHGLVTCGSLGEASTLTLEEKLEVARIALDA
AASRVPVLANVSETSTREALRYIDGANKLGVAGFMVMPSVIYVADAREAMANVRAMANAAQKPVMVYNNP
VAYRVDLKPEHMLALADCEWITAIKESCGDIRRITDLRNTVGDRYQLFCGVDDLAYEALALGADGLLAGV
GCAFPRETVALYDLMKAKRFDEALRLYQWMTPMLHLDVSNKLVQNLKLIDVLAGVGTEHMRLPRMPVIGE
EREFIIGVVNKALATRPAEYRSID
>gi|319763267|ref|YP_004127204.1| tripartite ATP-independent periplasmic transporter dctq component [Alicycliphilus denitrificans BC]
MPSSRNTTGKETSRHGWARWIQLASSAILRIERVALMMLMGSITLLILLNVATRYTGVPIYWVDEAAVYL
VVWLSFIGASAMTRLRLDFAVTLLTDSLGERAARRVKAVATACVLAFGCAMVAMCWLWLDPVGIASHGFD
AKAYAAESFNFLYTEHTQTLNWPTWVVQLVIPLFSLSFTVHALANLIEDMGFAPRAAIAGFDLGNAEETV
N
>gi|319763268|ref|YP_004127205.1| trap dicarboxylate transporter, dctm subunit [Alicycliphilus denitrificans BC]
MITSLFFLAVMFLGVPIGVCLCLAGIVYIFDTDAIVLLQSFPPQMFGGVDSYGLIAIPLFILIGEIMGSG
GITRRLVELAMGFVGAVRGGLAYVNVLANMMLASIIGSATAQVAIMSKIMVPEMEKQGYDKTFAAGVTVY
GGMLGPIIPPSVMFVVYSVLAQVAVGDMLMAGILPGILLTLLFFVVIACMGLIYDYPRSEKKTLAERART
IVQASPTLLIPIVIVGSILAGMANPTESAAVGAVVSALVGRYVTREFRYAMLPQILLRSAVYSAIVLFLV
AAAAVFSWLLIYGKVPQAAASWIQTVAKDPVSFLLITNVILLVIGTVIDGIPGLIMTVPILLPIATDVYH
IDPRHFGVVVVVNLVLGLMSPPVGLSFFVAAAVTGAKPGKMFMVTMPFFLICCAALVLLSLFPGLSLGLL
K
>gi|319763269|ref|YP_004127206.1| extracellular solute-binding protein, family 7 [Alicycliphilus denitrificans BC]
MTLTRRHFVQASTALAAPAFIGQARAQAKEFRLGLITPGGHSWNRAALAFGETLKKETNGRLSASVFHSG
QLGNESAMMQQLQTGALDMGWIQAAELGSRVSSIAAINAPYLVRSTTDVAKLVRHDAALKLLEVLPKETG
TIGLGWGITGMRVVFSTKDITGVKDIKGMKLRINPTPVYRDFYQQLGAAPTPIPTPQVFDAMANGQVDGL
EADIEFSWNQRFDKVAKAMLQMNALFMPFAPLVSGRVWQKLDAKDKELIRGLVRQSLDAQIKDIVTTELG
LIDKFKAAPFPIRTEPQLDVATLAREFDKIWLPKAPQIAELRKVGATL
>gi|319763270|ref|YP_004127207.1| malate/l-lactate dehydrogenase [Alicycliphilus denitrificans BC]
MSTPHTSEAPPLFLPVEELLALAGRVFLRLGLSLPHAEAMARTVVAGQRDECHSHGVYRILSCAHTVRAG
KVALQAEPVLTPASGAVVRVDARYGFSPLAFERGLPALVAAARQHGIGALAIQHCFHFSALWPEIEAITA
HGLAALALTPSHAWVAPAGGRQPVFGTNPIAFGWPRPGQHPFVFDFATSAIARGDLELHRRAGTPLPPGC
GVDAQGRPSTDPVAVAQGAMLAFGGHKGSALSAMVELMAGALIGDWTSAESLAFDAGDGATPCHGELILA
FDPARLGGGDLADQQQRAERLFDAITGQGARLPSQRRFEARARSLERGVAVPRALHAEILALAD
>gi|319763271|ref|YP_004127208.1| gntr domain protein [Alicycliphilus denitrificans BC]
MSFHTDKPSTISAPKRRAADVAYDAIEVLISTLEMQPGSPVVEAEIAERTGLGRTPVREALLRMVSIGLI
EQQPRRGLLVSNIDLADHLDVIQTRRVLECLIATCSARRATAAQRQEILRCAQKMRLAAERGLLDEYMRA
DHELDVVNHQASRNHSAVKCVVPLIVQCRRFWYAYQHEGELTEGARAHMALAEGIATGDEAAATAGAHQL
MDYLERFARRIIDQ
>gi|319763272|ref|YP_004127209.1| pseudouridine synthase [Alicycliphilus denitrificans BC]
MHNSHDPRVLPMRDGVNPCCVVLPSQGQGLLLDFLARRLPAVSREDWLRRLHAGEVVDEWGRAATAHSPF
TPGVRYYYYRELAHEAEIPFQETVLYQDEHILVADKPHFLPVVPAGRYLQHTLLVRLKRRLGLRELSPVH
RIDRDTAGLVLFSVQRATRGRYQALFRDRQVRKVYEAVAPWRADLRFPRTHASRLQESGHFFRMHEVPGE
PNAVTTMDVAEQAGGWARYRLEPVTGKRHQLRVHMAALGLPLCGDGFYPEVNDPPEGDYSNPLQLLARTL
SFTDPVTGQERRFDSRLRLRPLADFAGPATAGAPRA
>gi|319763273|ref|YP_004127210.1| gcn5-related n-acetyltransferase [Alicycliphilus denitrificans BC]
MMDKHYLTPLFNPGSVIVLAGDTEALESQTPQARALREALTAQRFTGQLQFFDIHTTGTLADLAQIRADL
AIIAQPPQDLPAALDVAGRMNCKSALVLSSGVDAQLAEQLRKIARREGMHLLGPNSLGLQRPSLQLNASA
AGPLAREGSLALVCQSGALTASILDWAANNAVGFSSVISLGPHTDVGLSEALDFLANDGRTQSIVVYMEG
IQDARRFMSALRSAAYAKPVVVLKAGRKPAGNQAAQTHSGAIVGSDDVFDAVLRRAGAVRVRSFVELFSA
AKCLASRYRPVGRRLAIITNGGGPGVLAADWENEIGLDLGRLSAETREALAPRLPPLATLTDLMDLSEEA
GPEHYREALEAAFRDRQIDGVLAIFSPKAGIDAEGVASVLADAKRLASKPLLSCWMGDAAVVPARKILRA
AQIPTFRTPEAAVGAFGNIASFYQNQQLLQQTPPPLTTLAKPDIEGARLVIESVLAERRNVLTEMESKTL
LAAFHIPVTKTLLARSSNEAMMIATQLGFPVALKIDSPDIAHKSDVGGVALSVPNGAAARDAYTDMVQRV
ARLRPEARINGVTVQKMARARRGREICIGLVCDDPFGPVITFGAGGTMIELIDDRAMELPPLNQFLARRL
MERARVAETLGEWRGASAVDMQALEQVLLRVSEMVCALPQLREMDINPLIVDEQGAVAVDARIAIHETAR
GGGRTEGAGHGHYGHLSILPYPARYEQVWPLRGGGEYLVRPIRPDDAQMVQRLVKELSPESRYFRFVSQI
AELPPSMLARFTLIDYDREMALVAVHRERVADEEGEVSHKERIVGVSRYVTNPDHTSCEFALLVADDFAG
KGLGSRLMLSIMEVARDRGLAEIQGLVLANNPTMLKLMRRLGFEVRAFDEDPEFKLVVHQL
>gi|319763274|ref|YP_004127211.1| three-deoxy-d-manno-octulosonic-acid transferase domain-containing protein [Alicycliphilus denitrificans BC]
MQRLALALYSLALWLAQPLLLRKLRRRARTEPGYAVAVPERFGRYRGLPPMDGQGGPLVWIHAVSLGETR
AAAILLKELRAQLPGMRLLLTHGTATGRAEGEKLLQPGDVQVWQPWDTPGAVRRFLRRFRPAMGILMETE
IWPNLVAGCRAARVPLVLANARLNEKSRAGARRLAWLSRPAYAGLAAAWAQTGQDAERLRDVGARVAGVF
GNLKFDALPSAAQQAQGRAWREAGDRPVVLLASTREGEEAMWLEVLRQKWPLAPAGQSQVAIETEARMPV
QWLLVPRHPQRFDEVLRLCEAAGLRVSRRSQWGPAPQQADVWLGDSLGEMALYYGMAHAALLGGSFAPLG
GQNLIEAAACGCPVVMGQHTFNFAEAARLAIDAGAAERVAGMAEGVAAATALAQDPQRRAAQAARCLAFT
QAHRGAARATARAVLELLRAAEGHPPN
>gi|319763275|ref|YP_004127212.1| phosphoglucomutase [Alicycliphilus denitrificans BC]
MQLSPAIFKAYDIRGIVPATLDEDVARALGRAFGTAALAQGERAVAVGRDGRLSGPQLSAALIQGLVDAG
VEVIDVGMCTTPMLYFAASTLCASGIQVTGSHNPRDYNGFKMVLAGRAIHGDEIQQLRRTMESGSWQPAP
GGSVRRADVLPAYVQRIVGDVKLARPMKIVVDCGNGVPGASAPGIFRALGCEVAELFSEVDGNFPNHHPD
PSKPENLRDVIEALRTTDAELGLAFDGDGDRLGIVTKDGQNIFPDRQMMLFAQDVLSRVPGAPILFDVKC
TQRLAPAIRAAGGEPVMYKTGHSLIKARMKELQAPLGGEMSGHIFFKERWYGFDDGTYAGCRLLEILSRS
ADPGAVLNALPASHSTPELNVPCEEGEPHRLTAELQALAAGSFAAPASISTIDGLRVDWPDGFGLIRASN
TTPVLVLRFEGHTPEALRRIEADMLALLARVKPGAQIGGAAH
>gi|319763276|ref|YP_004127213.1| hypothetical protein Alide_2593 [Alicycliphilus denitrificans BC]
MALSIDRRHALQSLAALAAAAAVPARAQAYPNKPIELIVPFAAGGGTDVLARALAEQARAHLPQNLIVIN
RAGASGGIGWGELVNAKPDGYKLAIITVEITMIPHMGLVKLTADDVLPIARLNADPATIAVRADSPYRTL
EDLLAAARKNPGAVRVGNAGPGSLGHLAAAALEDKAQAQFNHAPYRGANPAVLDLLGGHIEAVAVTPVEV
ATYVAAGKVRPLAVMADKRIGAGWEQVPTLKERQIDLSIGGWRGLAAPRGTPPEVVATLRTAMARTLQEP
ALRETMAKQNMGEGYLDAPDFKALIVRDNAFFKQLIGRLDIRA
>gi|319763277|ref|YP_004127214.1| hypothetical protein Alide_2594 [Alicycliphilus denitrificans BC]
MKRKTFCLLAAAALLAGGMNAHAQGAYPAQPVKWIVPYAPGGTTDVIARNLATRMGQDLGQPVVVDNKPG
AASIIGATFIARSQPDGYTVGTADSGTLAFNPAMYASLSYDAGKDFTFIGGLGKMPLVLAVAPNFPAKNV
QELLALVKKSPGSVSSASSGPGSPLHVALELFKQRTGTDLMHVPYKGSAPALQDLMAGQVQTMFVDLPPS
LSMIKGGKIRVLAVATPQRLSILPDVPTMAEAGVPGFEAYAWQGFVGPAKLPDAVVQRLNKDLVAALKHP
EMRARLEELGIQPMPMAPAQFGEFVRSEQKLWSGVIKAANIHLD
>gi|319763278|ref|YP_004127215.1| myo-inositol catabolism protein, protein iolb [Alicycliphilus denitrificans BC]
MTISPLLIKAARSGRVVADITPASAGWRHVGFRALRLGAGEEEAFDLPAGRELCITILTGQADVQVDDAL
YTALGGRASVFDDAAPAAVYVPPGRRVRIAARGDAEVALSTAPAQGRLPARVIEPGHMKRSVRGQGSNTR
YVCDILPEGEPAEGLLVVEVVTPAGHSSSYPPHKHDTAREGETSLEETYYHMLRPEQGFAFQRVYTDDRS
LDEAMAVEHRDTVLVPRGYHPCVAPHAYDLYYLNTMAGPQRRWAFWNDPQHAWMLEPR
>gi|319763279|ref|YP_004127216.1| hypothetical protein Alide_2596 [Alicycliphilus denitrificans BC]
MPTTLNFPPGRTHDVACLGRLAVDLYAQQIGCSLEDAASFSKYLGGSSANIAFGTARLGLRSAMVSRVGD
EQNGRFLLNTLRNEGCDVGQVQIDPQRLTGMVLLGIKDQDTFPLLFARENCADMALDAAAIGEDFIAGCR
SLLITGTHLSTPTVLAASRRALELAGRHGAVRVLDIDYRPVLWGLTGKGDGETRYIGSDAVSQHLQAQLP
LFELIIGTEEEWLIAGGEAELMAALRSARRHTRAVFVVKRGALGCSIVDGEVPETIDDALTVLGERIEVL
NVLGAGDAFASGLLYGLLTGQGWEESARIANACGAIVVSRHGCAPAMPTRAELAHWFASERHVRPDQDAQ
LAHLHRVSVPRRQWPELYVLAYDHRAQFEDMAREAGADAARIPALKKLINRVVADIEAQDAGVRGKLSVL
IDGRLGEAALHDATGRGWWLGRPIERPGSRPLRFDGTHSLGSQLVHWPREQVVKCLVFYHPDDPEPLRAE
QEEWLRQAWEATRESGHELLLEVIPPRGMPGDAGEATVRAIRRLYDLGFRPEWWKVGAMAARHWQALDAL
VQERDPYCRGAVILGLSQPLDQLVAGFAEARVSRIVRGFMIGRSVWAEASREWLAGRIGDAEFQSRVAAN
FRQLIEGWRAARQTPQQKEAA
>gi|319763280|ref|YP_004127217.1| sugar isomerase (sis) [Alicycliphilus denitrificans BC]
MENRKNKPNTDALPSYANADAFLDDLRTRYPQLSRQLQAIARHVEHSGAHIALQGIQEVAQHCGVQPSAV
VRFAKHFGFHGYTQLQTLFRAGAARQLAPQRDYQDRIRSLIDAGTGPLSGTQIAHEVVEGGLASLRALQA
GLADAPIDAAVDLLADAPALWLAAARRAFPVGAYLAYALQHTAKPVHWLHGLGAMQMGELRAMAPGDVIV
AVSFEPYARETLELVDAALERGARLLALTDSPLSPLAARASVTLAAQDSATFGFRSLTGTLCLAQSLFIA
LAYRMELVSA
>gi|319763281|ref|YP_004127218.1| alka domain protein [Alicycliphilus denitrificans BC]
MPSDFRADDDDARYLALKARDARFDGRFFTGVTSTGIYCRPVCAVRTPRRENCRFFALAAQAESAGFRPC
LRCRPELAPQALAWSVQDASGILVRQALRLLDAPEAWGAEGGGALVAQLAARLGVSDRHLRRIFGEALGV
SPLQYLQTRRLLAAKQLLTDTALPVTQVALASGFASVRRFNAAFGAHYGLNPTQLRRQGAPAGGAGRPVR
LGYRPPYDAAALLGFLAARRIHGMEEVEGLALRRTVRLRAGGAAYTGWIGARFDPGRPLVLLEASPGLLP
ALPQVIARVRALLDLDADPGPINAALHAAFPGGDGLRVPGAWDGFELAVRAVLGQQITVAAARTLAQRLV
ERFGEPVQTPWPGLDRLFPAPAVLAAAQGDALGQLGIVRQRQAAIVALAQAVDGGRIALHAGSDVDATLA
ALRQLPGIGDWTAQYIAMRALRWPDAFPAGDVALHKALAVQGAPQPARAALAAAQAWRPWRSYGVIRAWA
GLAAPLPNL
>gi|319763282|ref|YP_004127219.1| methylated-DNA/protein-cysteine methyltransferase [Alicycliphilus denitrificans BC]
MQYPPDTVQARTPTALGDVRLAASARGLVGLWFDGQRHLPAQLDGPGAWPTDDAHPVLRAAAAQVREYLD
GTRTRFDLPLDLSGGTPFQQAVWRALLAIPRGGTTTYGALARQLGRPAAVRAVGAAVGRNPISVAVPCHR
VLGSGGALTGYAGGLPRKTALLRLEASSPSHSLPA
>gi|319763283|ref|YP_004127220.1| hypothetical protein Alide_2600 [Alicycliphilus denitrificans BC]
MTLPATPAATASQPSWAGEFLLLSALWGASFLFMRLGAAEFGPLPTAGLRVALATLFLWPILVQRGEWPA
LRRHWRPVLLAGLVNSAIPFALFAWAVMHIATGLTSILNATVPLFGALVAWAWLGDRIGRLRWLGLGLGF
LGVALLAWRAPASAGVQSGHTGWAIAACLLASTCYAVAASYARRHLAGIPPLASATGSLLGAALGLALPT
LLFWPAQMPGPRAWAAIVAIAVLCTGIAYILYFRLIAHAGPSRALAVTFLAPAFAVAYGAAFLGEAVTPW
MLGCGAVIVCGTMLSTGLVGPRGAQAR
>gi|319763284|ref|YP_004127221.1| forkhead-associated protein [Alicycliphilus denitrificans BC]
MTGMGEGPGVNSHKTVVFADMTGSTALYEALGNEGAAAVVAPLTQAMGACIQRYGGRVVKNLGDGVLGLF
AEPGDAVLAAAELMREHRQWIGPQARESHVGIHVGLASGEVVEVDGDCYGDAVNVAARLCERADDAEIWA
AESVVAGLRAPRGMCFVRLGHLEMRGKAEPLVTYQIEWRAENRADLTVHSELRSDLAALVADTGPAQIQL
SWPGAYRLFSSMDIPVNVGRAPDSHLCIADPRVSRVHARLDWRHGAFVLTDLSSFGTWVRFEGSEAPLQL
RRDSCRLIGSGEIALGVPFADASASIIGFQVSGTGARQQD
>gi|319763285|ref|YP_004127222.1| muramoyltetrapeptide carboxypeptidase [Alicycliphilus denitrificans BC]
MHDHHEDCGHDHGPKHIYVYSPASAVRDKAAFKRGIARLRALGHEVEVDADALATHTRFAGDDATRLAAI
HRAAASGADVALISRAAYGFTRILPGIQYKKIAKAIERGTRFVGMSDFTAFQNAVLARTGATTWAGPSLE
IDWGVEGEPDDIMAACFDDLLTGHGEGAGWRMGKEPPRADGRPAVPDVYVKSAQLWGGNLAVLTSLAGTP
YFPEVKGGILFVEDISEHPYRVERMLTQLLHAGVLARQKAVVLGQFTNYKLAPHDKGFRLQSVVDWLRTQ
IKAPVLTNLPFGHVPTKVLLPVGAQVSLSVEGRDALIYWGHAH
>gi|319763286|ref|YP_004127223.1| cmp/dcmp deaminase zinc-binding protein [Alicycliphilus denitrificans BC]
MSESEDDATWMREALAQARAALQDGEVPVGAVLVRGGEVIATGRNAPIAGHDPTAHAEIAALRAAAARLG
NYRLDGCTLYVTLEPCAMCAGAMLHARLPRVVYGAADPKTGAAGSVVDLFAEPRLNHQTRVAGGVLAEEC
GALLSGFFRERRRAQRAAHPLRDDALRTPDAAFAGLPDWPWQPRYVSDLPSLAGLRLHYVDEGPRDAPLT
WLCLHASPAWSHAWRHMLPVLLQAGHRVVAPDLIGFGRSDKPKKEAAHRLDWHRQVLADLAQRLALRNVV
LLAQPGAVLPWPDAPLVLVQEGAADDGLPFPDAGHRAGPRAFARFGAEPGVPACTVPDASAASARAAMEY
SARYARPS
>gi|319763287|ref|YP_004127224.1| negative transcriptional regulator [Alicycliphilus denitrificans BC]
MYLPPQFRSKDPAHAAALMRAHPFASLVSNDDEGFPFVTHLPLHLEERAGGEWVLLGHCARPNPHWRYLR
SRPEALAVFQGPHAYMSPSVYPDSARVPTWNYLAVHCRVRATPVEGDAATDALLKTLIADHEPAYAAQWR
ALGGEFAHRMMAGIAAFELQVLDVQCKIKLNQHRKEAHAAMHARYAAGTPDERALAEWMRRLGMAGEELQ
>gi|319763288|ref|YP_004127225.1| peptidase u32 [Alicycliphilus denitrificans BC]
MSLAPHQLELLSPARDADIGIEAVNHGADAVYIGGPAFGARATAGNGLRDLERLIRHAHRFHSRIFVTLN
TILRDDELEDARRMAWQVYEAGADALIIQDMGLLEIDLPPIQLHASTQTDIRTPEKARFLQDAGLSQIVL
ARELDLAQIAAIRAATDPARTTIEFFVHGALCVAYSGQCFISHAHTGRSANRGDCNQACRLPYEVLDGQG
RIIAHEKHVLSMKDNNQSDNLRTLIDAGVRSFKIEGRYKDMGYVKNITAHYRRLLDEIVEEGGFARSSSG
RTAFSFTPDPDQNFNREFTDYFVNGRQQDIGAFDTPKTPGRAIGWVTQVGDKWFELETSDHATQLHNGDG
LCYYDLQKDLVGVHVNRAESVRSGVWRVFPKDAIAGFKDLRKGLEINRNRDMDWVRTLEKKSSERRIGVW
AQLSETPDGFALTLTDEDGFTGSAHAVQEHQPATDAAKAESTLREQLGRFGATIFQVHDIALQLSQPWFV
PASALNQLRRDAVAALEHARAEGLVRLPRAKPVEPPVPFPEDTLTYLANVYNHKARDFYARHGVKVIAAA
YESKEEEGEVSLMITKHCVRYSMSLCPKQAKGVIGVKGTIRAEPLQLINGKEKLTLRFDCKPCEMHVVGR
MKKSVLNQHLRDMQEKPLRFYRTRPAA
>gi|319763289|ref|YP_004127226.1| o-acetylhomoserine/o-acetylserine sulfhydrylase [Alicycliphilus denitrificans BC]
MRIETLAVHAGYSPDPTTKSVAVPIYQTVAYAFDSAQHGADLFDLKVPGNIYTRIMNPTTDVLEKRVAAL
EGGIAAVAVASGMSAITYAIQAIAEAGDNIVSASTLYGGTYNLFAHTFPQQGLEVRFADPRDPASFGKLI
DERTKAVFCESIGNPLGNVTDIRALADVAHAHGVPLIVDNTVPSPYLLRPIEHGADIVVHALTKYLAGHG
NSMGGAIVDSGKFPWAEHKARFKRLNEPDVSYHGVVYTEALGPAAYIGRVRVVPLRNTGAAISPHNAFLI
LQGIETLALRMDRICENSQKIAEALQRHPKVEWVRYAGLPEHPDHALVQRQLGGRASGILSFSLKADDAR
AAGARFLDALGLFTRLVNIGDAKSLATHPASTTHRQLNADELAKAGVTEGMVRLSIGIEHIDDLLEDLHQ
ALDAV
>gi|319763290|ref|YP_004127227.1| hypothetical protein Alide_2607 [Alicycliphilus denitrificans BC]
MNAPGPPPAPLVGGVDAAHRYAAVRAATEALAQPLSAEDCCVQSMPDASPAKWHLAHTTWFFETFILEAH
EQGFRPFDPAYRVLFNSYYQGVGRQHPRPQRGLLTRPPLATVLAYRADVDARMRRLLERGAPPAGLGALL
ELGLQHEQQHQELLVTDIKHLLWCNPLWPAYRDAPAPPPPGRAGAAQAGWRRFDGGLVEIGHAGEGFAFD
NELPRHAVYLRPYELATRLVTNADYLAFMADGGYRDPAHWLAEGWDWCCAQQIAHPLYWRRDESGWSEFT
LAGGRPLAPLQPVAHLSYYEADAYARWAGARLPTEAEWEAAAARAAGVDQGHFADSGALHPRPAQPAQGG
ALRQMFGDVWEWTRSSYAPYPGFSPAPGAVGEYNGKFMVNQYVLRGGSCATPAGHARASYRNFFPTGARW
QFTGLRLARDS
>gi|319763291|ref|YP_004127228.1| methyltransferase [Alicycliphilus denitrificans BC]
MPAIAPSLALSRQAQPVGQAYAACRREITDALLAPRASISPKYFYDRRGSELFEAITRLPEYYLTRTERA
LMRRHGRAIAEAVGAGRVVIEPGAGSCDKARDLCRRLAATHFVGVDISADYLQGAVARLRAALPGLDARA
VGGDITAGLRLPPDIPGQRRLVFYPGSSIGNFDPPQAVALLAQMRALAQGGGALLIGVDLPKPRAVLEAA
YDDAAGVTAAFNRNVLAHVNSLIGSDFDPRQWRHRAFFNPVASRIEMHLEALGPQRVRWPGGGRDFAAGE
RIHTENSYKHPLPAFTALLRQAGFAGTQSWTDARGWYAVVHARA
>gi|319763292|ref|YP_004127229.1| ompw family protein [Alicycliphilus denitrificans BC]
MKKNLLALAVLCAMTSGAAYAQQQDGQWMVRARAVHLDSSNGGAAGAAGVSINDKWIPEVDVSYFFTPNF
AAELILTYPQKHDVRLNGGKIGTLKHLPPTLLGQYHFTGMGAFKPYVGAGVNYTRFSSVDIAGGALTVKK
NSWGPALQVGFDYALDKNWSLNFDVKKVYIDTTVSGGIGKFKVDPVLVGLGVGYRF
>gi|319763293|ref|YP_004127230.1| hypothetical protein Alide_2610 [Alicycliphilus denitrificans BC]
MAGASLLTLLDDIATILDDVALMSKLAAKKSAAMADDVSAMTKVAAQKTAGVLGDDLALNAQQVTGVRAE
REVPVVLAVAKGSLGNKAILVPAALLISAFAPWAVTPLLMLGGAFLCFEGCEKLAHRFLHTPQEDAAAHA
RHAQANADPAVDLAALEKDKIKAAVRTDFILSAEIIAITLGAVAAAPLVQQVAVLAGIAALMTVGVYGLV
AGIVKLDDLGLWLSRRPGAAAQALGRGILAAAPWLMKALSVLGTAAMFLVGGGILVHGVPALHHAVAAAG
AAAGGWPLGGLWALLASSLLNALVGVVAGAIVLAGWTLLGRLRGTAALHG
>gi|319763294|ref|YP_004127231.1| phosphoribosylformylglycinamidine synthase [Alicycliphilus denitrificans BC]
MTLHITTLEGGNALSTFRAQQLLPQLQAIHPKIEGIAARHVHLVAQDAAPTPAGQERLAALLCYGDPYGG
PADGVALLVTPRLGTVSPWASKATDIARNCGLAVRRVERITEYRISLKGGLLGGRPELSDGQLQQVAALL
HDRMTESVVASRAEAGRLFTELQAEPMAFVDVLQGGRVALEAANKAWGLALADDEIDYLVNAFTGLARNP
TDVELMMFAQANSEHCRHKIFNAQFTIDGVAQDKSLFGMIRNTEAVSPRHTIVAYADNASIMEGSEVEQF
FARFDSSAYRASAPSYQKRSGTHHVLMKVETHNHPTAISPFPGAATGAGGEIRDEGATGRGSEPKAGLTG
FTVSKLWGSEVGRPGHIASPLQIMTEGPLGGAAFNNEFGRPNLCGYFREYEQQVGDVTRGYHKPIMIAGG
LGTIDARHTKKIEFPAGTLLIQLGGPGMRIGMGGGAASSMATGTNAAELDFDSVQRGNPEIERRAQEVIN
HCWAQGEQNPILAIHDVGAGGLSNAFPELTNDAGRGARFDLRAVPLEESGLAPKEIWSNESQERYVLAIA
PESLARFTAFCERERCPFAVIGVATEERRLVLEDTAVAEGAQKYPVDMPMDVLLGKPPRMHRDVASVRRS
FAPLNVDGLPLEKAVIEVLAHPTVASKRFLINIGDRAVGGLTHRDQMVGPWQVPVADAAVTLADYRGFAG
EAMAMGERTPLAAIDAPASGRMAVAEAITNLLAAPIELPRVKLSANWMAACGEPGEDAALYETVKAVGME
LCPRLGISIPVGKDSLSMRTQWTEGGEVKKVTSPVSLIVTAFATLADVRGTLTPQLDAREEDSTLVLIDL
GRGRNRMGGSILGQVLGQSGHETPDLDDPKDLVALVDAVNALRAKGQILAYHDRSDGGLLATVAEMAFAG
QVGVALNVDMLITEGDGISDSRMDSGEGKNWGAQVSGRREAQTLAALFNEEPGVVLQIRTADRAAVMQTL
REHGLIQCSHAIGKTRPMASPVDAGKGELQVWRDAKKVFGASLSDLHQVWDAVSWKICQQRDNPACADSE
HAAAGDPADPGLHVRLTFDTLDDVAAPYLQLARPRVAVLREQGVNSHVEMAYAFTEAGFEAFDVHMTDLQ
AGRARLEDFAGVVACGGFSYGDTLGAGIGWARSITFNERLSEQFQRFFGRGDTFALGVCNGCQMFAELAD
IIPGAEDWPRFTTNQSHRFEARLSMVEVLDSPSLFLQGMAGSRLPIVVSHGEGYANFERRGNAGRAVAAM
RFVDNHGQPTERYPFNPNGSPGGLTAVTTRDGRFTAMMPHPERAFRNIQMSWTDLAATGGPEALSPWMRI
WRNARKWVG
>gi|319763295|ref|YP_004127232.1| methionine aminopeptidase, type i [Alicycliphilus denitrificans BC]
MSSITIKDAQGIAGMREACRLASEVLDYITPHIKPGITTAEIDRLGAECMVSQGTVSATIGYQPPGYPPY
PGHLCTSVNHVVCHGIPNDKPLKKGDIVNVDVTVITKDGWYGDNSRMYMIGECSIAAKRLSALTYEAMWL
GIQQVRPGARLGDIGHAIQKFAEGHGLSVVREFCGHGIGQKFHEDPQVLHYGRPGTGQELVPGMTFTIEP
MLNQGKRDIKELGQDGWTIITKDRSLSAQWEHTVLVTPTGYDVLTLSAGSPPLPPFVKATTT
>gi|319763296|ref|YP_004127233.1| protein-p-ii uridylyltransferase [Alicycliphilus denitrificans BC]
MSSRHPLPPSDSASLHALRDGYRQDKAALLARLHVPDASTRGIRSLLRRLSALADTVLCRLWTHAQLPQS
WALVAVGGYGRAQLFPHSDVDVLLLLPDGTQACADEARKPIEAFIGSCWDAGLEIGSSVRTTAECLAESA
ADVTVQTALLESRLVCGSAALFEDFRRRYDAQMDPRAFLVAKTLEMRQRHTKYEDTPYALEPNCKESPGG
LRDLQIILWAARAAGLGRTWRELEASGLATPFEVRQIERNEALLFLIRARLHVLAERREDRLVFDLQTAV
AEAFGYRSTAPDGRGLAMRASETLMRRYYWAAKAVSQLSQILLLGIEERLNPSTHELRPINPRFFEKAGL
IEVASDDLYEKHPHAILETFLLYESTLGLKDLSARTLRALYNARAVMDRRFRHDPANRALFMQILRQPRG
ITHAMRLMNQTSVLGRYLWPFRRIVGQMQHDLFHVYTVDQHILMVLRNMRRFFMAEHAHEYPFCSQLAAG
WDKPWILYVAALFHDIGKGRGGDHSQIGAQEARHFCRQHGVEREDARLIEFLVAEHLTMSQVAQKQDLSD
PGVIAAFARRVGNERYLTALYLLTVADIRGTSPKVWNAWKGKLLEDLYRATLRMLGGRAPDAAAEIEARK
REALILLALSALPHEAHKRLWGTLDVSYFMRHEAPDIAWHTRHLSRHVGSTRAIVRARLSLAGEGLEVLV
YAPDRADLFARICGYFDRAGFSILDARVHTARNGHALDTFQVVASSQPGAYRELIHMVESDLQRAIEDQG
ALPEPARRRVSRRVKSFPIAPRVTLRPDEQAQRWIISISASDRAGLLYMVARVLSRHGLNVQLAKVSTLG
ERVEDTFLVQGPELQSNAQQIRIETELLQALADQ
>gi|319763297|ref|YP_004127234.1| xanthine permease [Alicycliphilus denitrificans BC]
MNTHSLNSAHATPRPEDENLGLGANLAYGLQHVLTMYGGIVAVPLIVAEAAGMPASDTGLLITACLFMGG
VATLLQTLGIPFFGSRLPLVQGVSFAGVATMVSILQTGGGMQGILGAVMASAVLGLLIAPVFSKVTRFFP
PLVNGCVITVIGLSLIPVAAHWAMGGNARAADYGSMGNIALAGIALVTVLVLSKLGNAAISRLSILLSIV
IGTLVAALLGKADFSQVAQGAWFAIPAPLHFGWPVFNAAAILSMFIVILVILVETSADVLAVGDIVGTRV
DSRRLGDGLRADMLSSIVAPLFGSFTQSAFAQNVGLVAVTGVKSRFVVAYSGLILIALGVLPVMGRVVAC
VPPSVLGGAGLVLFGTVAASGIRTLSKVDYQNNMNLIVVATSVGAGLIPVVAPKFYAQFPDWFATIFHSG
ISATALVAIVLNLLFNHFKRGNSDQQSVFVAASDRTLSAHVLASLYDGDVVVDGKLYDKNGRLVPVAGAH
AH
>gi|319763298|ref|YP_004127235.1| peptide deformylase [Alicycliphilus denitrificans BC]
MTQRTILKMGDPRLLRVARPVTRFDTDELHGLLADLLDTMHAANGAGLAAPQIGVDLQVVVFGSGAPNPR
YPDAPVVPRTVLINPVVTPIGDEESLDWEGCLSVPGMRGMVPRWQTVRYTGFDVRGEPIDRTVSGFHARV
VQHECDHLWGKLYPMRMRDFSQFGFTEVLFPDIGTVEDE
>gi|319763299|ref|YP_004127236.1| hypothetical protein Alide_2616 [Alicycliphilus denitrificans BC]
MPQPSEEVPPVPEQVPLPAVARWLLLLFAGLCLALGVIGVVVPGLPSTVFILMAAWAAARSSPRLYRWLW
HHPLFGSMLRNWHNGGRVSRHAKWSATCLMALCALILLWINIPLWAATSGCVSMACVLTWLWLRPEPQR
>gi|319763300|ref|YP_004127237.1| hypothetical protein Alide_2618 [Alicycliphilus denitrificans BC]
MAQTAFASVKLPNTLVEQARQAAQPMRRSVASQIEYWATLGQIVEHTGLSVQEARTAIEQYEAAAERSSA
TAPASVDALTARLLAAQARGSLAERVREVVQGNQARTA
>gi|319763301|ref|YP_004127238.1| hypothetical protein Alide_2619 [Alicycliphilus denitrificans BC]
MAAAPLWFHLLAGPNGAGKSTLYRALVREGILGPPLEFVNADLHERDHLQHITDPLRRSQAARAWADGRR
AALLAARQPFASETVFSHPSKLELIASAQRQGYTVALHVVALDDPQRLLGRVAQRVREGGHPVPPERILA
RYPRTMVLLAQAVRLADVAYLYDAVDTSAGGPRLVAVRSGAGTIEPAGSLPAWARAMLGR
>gi|319763302|ref|YP_004127239.1| isocitrate dehydrogenase, nADP-dependent [Alicycliphilus denitrificans BC]
MTSYQHIKVPAEGQKITVQADMSLNVPDQPIIPYIEGDGTGVDITPVMLKVVDAAVAKAYGGRRKIHWME
VYAGEKSTRVYGPDVWLPEETLHAVRDYVVSIKGPLTTPVGGGIRSLNVALRQELDLYVCLRPVQYFKGV
PSPVKEPHKTNMVIFRENSEDIYAGVEFEAQSDKAKKLIKILQDEFGVKKIRFPETSGIGIKPVSREGTQ
RLVRKAIQYAIDNDKPSVTLVHKGNIMKFTEGAFRDWGYELAAKEFGATPIDGGPWMRLKNPRTGKEITI
KDSIADAFLQQILLRPAEYSVIATLNLNGDYISDALAAQVGGIGIAPGANMSDSVAMFEATHGTAPKYAG
KDYVNPGSEILSAEMMLRHMGWTEAADLIIQSMEKAIQSKKVTYDFARLMEGATQVSCSGFGQVMIDNM
>gi|319763303|ref|YP_004127240.1| hypothetical protein Alide_2621 [Alicycliphilus denitrificans BC]
MNISPLRLPRPTHLLALALVCTGTWAQVGPQMDLRRVEITAGMHRIDAQVAASPQERQIGLMFRRDMPQH
EGMLFVFEQPATQCFWMKNTLLPLTAAFVADDGTIVNLADMKPMSEDSHCSARPVRFVLEMNQGWFARKG
LKAGSRLAGEPFKAARP
>gi|319763304|ref|YP_004127241.1| isocitrate dehydrogenase, nADP-dependent [Alicycliphilus denitrificans BC]
MSTQQPTIIYTLTDEAPRLATASFLPIVRGFTSVAGINVAESDISVAARILGEFADYLTEEQRVPNTLAE
LGKKTLEHDANIIKLPNISASVSQLMAAIKELQSKGYKIPDYPENPANEQDKEIKARYGKCLGSAVNPVL
REGNSDRRAPAAVKNYAKKHPHSMGEWKQWSQTHVSHMHHGDFYHGEKSMTLDKARDVKMELITASGKAI
VLKPKVALQAGEIIDSMFMSKKALCEFYERELDDCKEAGILFSLHVKATMMKVSHPIVFGHCVKIYYKEA
FEKHGKLFDELGINVNNGMVDLYEKIKVLPESKREEIIRDLHACQEDRPALAMVDSAKGITNFHSPNDVI
VDASMPAMIRGGGKMWGADGKPYDCKAVMPESTFARIYQEMINFCKWHGNFDPRTMGTVPNVGLMAQKAE
EYGSHDKTFEIAEAGVANIVDLATGEVLLSQNVEQGDIWRMCQVKDAPIRDWVKLAVTRARNSGMPAVFW
LDPYRPHENELIKKVNAYLKDHDTAGLDIQIMSQVRAMRFTLERVARGLDTISVTGNILRDYLTDLFPIM
ELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEENYLRWDSLGEFLALAVSLEDLGLKTGNASAK
LLAKTLDQATGKLLDENKSPSRKVGEIDNRGSQFYLSLYWAQALAAQTEDAALAARFAPLARQLAADEAR
IVEELRAVQGKPADIGGYYQPDLAKLDAVMRPSATFNAAIASLAA
>gi|319763305|ref|YP_004127242.1| superoxide dismutase [Alicycliphilus denitrificans BC]
MEHKLPALPYAIDALAPHYSQETLEYHHGKHHNAYVVNLNNLQKGTEFENMTLEEIVKKSSGGIYNNAAQ
IWNHTFFWNCMTPNGGGEPGGALAAAINAKWGSYAAFKEAFVKSAVGNFGSGWTWLVKKADGSVDIVNTG
AAGTPLTTADKALLTVDVWEHAYYIDYRNLRPKFVETFLDKLVNWKFPEANFA
>gi|319763306|ref|YP_004127243.1| exodeoxyribonuclease vii, large subunit [Alicycliphilus denitrificans BC]
MFEPPQAGVAPRIWEVGALCRAIADTLQARFNPIAVRGEITGFSRASSGHCYFTLKDGQGQIRCAMFRRA
ADLLDFMPRDGELVEVRGRLGVYEARGDLQLIVEGLRRAGQGALFEQFLRLKAQLEAEGLFDGARKRPLP
VMPRGIGLVTSPGAAALRDVVTALARRVPHIPVVLVPALVQGAQAPASICDALSKLYLLAQAGSAMEGDP
ASKTGAPPPIDVILLVRGGGSIEDLWAFNDERVARTIVQSPVPLVSGVGHETDFTIADFCADLRAPTPTA
AAELVSEPRAVWLGALDLLAGRLQDAAQRQIDLRHQRLDQASQRLGRPSGLVAQQRLRLAALAQRMRHGV
LLKMQRMAQASQALEASLPQGVRRSLAQRGERLERAALRLELLNPQLVLERGYALLTDAEGRAVLRPSQV
RLGDAVHARLAEGELDLTVAQRRLL
>gi|319763307|ref|YP_004127244.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
MLSIIQAAGWPIWPLIACSILALALVFERFMALKTARVAPPKLLDEAISVSSRAVPAPDVVAQLEQNSAL
GEVLASGLRALNGNPQSSEADLRAAMEGAGRKVAHRLEKYLTALATIASAAPLLGLLGTVIGMIEIFGSQ
AGTGAVGATGGGNPAQLAHGISIALYNTAFGLIIAIPTLIFWRYFRSRVDAYLLTLELASEQFVRHISRL
RK
>gi|319763308|ref|YP_004127245.1| biopolymer transport protein exbd/tolr [Alicycliphilus denitrificans BC]
MNFRPRQKEEPEINLIPFIDVLLVILIFLMLSTTYSKFTALQLTLPVADAQQLRDHPREVIVSVAADGRY
AVNKSTLEGKRVEQVAQALTEAATAGRDSVVIISADAAAPHQSVVTVMEAARRVGLSQITFATQSSATAG
K
>gi|319763309|ref|YP_004127246.1| tetraacyldisaccharide 4'-kinase [Alicycliphilus denitrificans BC]
MADHAARLRQAWRRRGPLAMALWPLSLLYGTLTALRRALYRARLLRSERLPVPVIVVGNVIAGGAGKTPV
TLAVVRHLRAAGWRPGVISRGYGRATGDCREVLPTASAAEAGDEPLLIARAAGVPVFVARRRADAGRALL
VAHPATDIIVCDDGLQHLALARDVEVCVFNDEGVGNGWLLPAGPLREPWPRAVDLVLHAGPAPGGPAPQF
ALSRALADHAVDAAGRQVPLAQLQGEPLHALAAIARPQDFFALLHAKGLRPATEEALPDHYDFSSWKCPP
DKHLRLICTEKDAVKLWPAHPDALAVPLRLSIAPAFFGALDARLASLSSPPH
>gi|319763310|ref|YP_004127247.1| hypothetical protein Alide_2628 [Alicycliphilus denitrificans BC]
MDPKLLELLVCPVTKGPLTYDRERQELVSRSARLAYPVRDGIPVLLENEARTLTDEELEQ
>gi|319763311|ref|YP_004127248.1| 3-deoxy-d-manno-octulosonate cytidylyltransferase [Alicycliphilus denitrificans BC]
MSAAAPFTVLIPARLASTRLPDKPLADIAGLPMVVHVARRAAQSGARRCVVAADDARIIDACLAHGVQAL
LTRADHASGSDRLAEACALLGLAGDDIVVNVQGDEPLIDPRLIDAVAALLHARADASMGTAAHAMESAAD
FANPNVVKVVLDAQGLAHYFSRAPIPHARDHAAGSAWWRQGRGVPAGFAPLRHIGIYSYRAGFLRRFPEL
PPAPTEQIEALEQLRALWHGHRIAVHVAASAPGAGVDTPEDLERVRALLAA
>gi|319763312|ref|YP_004127249.1| adenylate kinase [Alicycliphilus denitrificans BC]
MRLILLGAPGAGKGTQAAFICQKFGIPQISTGDMLRAAVKAGTPLGQQAKAVMDAGQLVSDDLIINLVKE
RIAEADCAKGFLFDGFPRTIPQADAMKAAGVKLDYVLEIDVPFDAIIERMSGRRSHPASGRTYHVKFNPP
KVEGKDDVTGEPLVQRDDDKEETVKKRLQVYSDQTRPLVDYYSSWAKADPANAPKYRAINGTGSVEEITE
RALAALSS
>gi|319763313|ref|YP_004127250.1| asparaginase [Alicycliphilus denitrificans BC]
MQVAATRKIVVLGTGGTIAGTSSVAGASVGYTAAQIGVRQLLAAVPGLAQAAGGVLEAEQVAQIDSKDMD
ADVWARLAQRCAAHLADPAVAGIVVTHGTDTLEETAWLLHELLDAAKPVVLTCAMRPATALVPDGPQNLL
DAVTLAADPSARGVLVVAAGVVHGAREVGKVHPLRLDAFASGDGGPLGWVEAGQVRWAHGRAPLAQPPSH
AALLPALGATAWPRVEIVTSHAGADGALVDWLVEKGARGIVAAATGNGTLHKALEAALARAVAAGVAVRV
ALRCPQGRMLDVHDAPWQGADGLSPVKARISLMLELMRSP
>gi|319763314|ref|YP_004127251.1| lexa repressor [Alicycliphilus denitrificans BC]
MLDSPKLTARQQQILDLIQTAIARTGAPPTRAEIAAELGFKSANAAEEHLQALARKGVIELVSGTSRGIR
LCGETVRNINAVRGTQFSLPIPGLSQLTLPLIGRVAAGSPILAQEHVDQTYTVEGSLFAHKPDYLLKVRG
MSMRDAGIMDGDLLAVQATREARSGQIIVARLGDDVTVKRLRRTGSAIELLPENPDYPVIRVEPGEPFEI
EGLAVGLIRNTMLM
>gi|319763315|ref|YP_004127252.1| hypothetical protein Alide_2633 [Alicycliphilus denitrificans BC]
MGIALFALSSLCQPLRRIAGSMRPRPAQAAHHGLPGHAHAIYPAGARASNDPQCAAIGGHGVPPATAASA
ARAPAPASRPLRVILNRHEGTACRLVISGRMADVCAELDRLVLH
>gi|319763316|ref|YP_004127253.1| ATP-dependent helicase hrpa [Alicycliphilus denitrificans BC]
MLSITFPESLPVSARRFDIMAAMGEHQVVIVCGETGSGKTTQLPKIALALGRGRCNAPEGSRGRLIGHTQ
PRRIAASSVAKRIAEELNTPLGEVVGYKVRFHDNLQKGASVKLMTDGILLAETQTDPLLKAYDTLIIDEA
HERSLNIDFLLGYLKQILPQRPDLKVVVTSATIDAERFARHFEGKGGPAPVIMVSGRTYPVEVRYKPFEE
KKDFDLDDAIADGVDELWRGGAGGDILVFLPGEREIREAADHLRKHLQHSPVLRNSEVLPLFSRLSQAEQ
DRIFDSHTGRRIVLATNVAETSLTVPGIRYVIDAGTARVKRYSFRSKVEQLLVEPISQAAANQRAGRCGR
VANGICIRLYGEEDFNQRDRFTDPEILRSSLAGVILRMKSLGLGDVVNFPFLEAPSGRAIADGYQLLQEL
GAVDERGNLLPMGKELSRLPLDPRVGRMIVEARARGALSEVLVIASALSVQDVRDRPLEAQAQADQAHAK
FDDEKSEFSGYLRLWHWLADARGGKAVATSRKEMAAQAAGAAPARNQAFLPVGKRAGAHPLPQEGEGSGD
THKLSNRQWEQLLRQNFLNIRRVREWRDIHSQLLTVVREHQWQPNAQPAGYEAIHLSMLSGLLGNIGFKG
EESEAYLGAHGIRFHPHPGAHLSKKPGRWIVAAEQVETSRLYGRGIAAIEPQWLEEVGGHLLRKQLLDPH
WSKKQADVVAYERATLYGLVVYNNRGVSYGRVDPVEARQMFIRRALVEGEWETRWPFLAANLRTIRKVED
LEHKSRRQDVLVDDDLIYAFYDQHIPEGVYSGATFDKWFRPAGKEQPGLLVLSRDELMRHEAAGITTDKF
PKTVKLGGADCSASYLHSPGDARDGITVTVPLFVLNQVSEERAEWLVPGMLKEKIQALLKSLPQRPRSRF
VPLPEHAERLAQIFIQEERWNQGGLVDVLLKQVRDETSLDVKRADFKLDMLSPHLFMNLRITDEHGRQLG
QGRNLAALKAEWGGKARGAFQALASLKIAGSAETKPQSDKKQPEIKDGQAPGAPEKKAPPAHPQGRRHTA
WDFGELPELMEIRQGGQTLIGFPALIDQGDAVTIEVFDEPEVAAARHRLGLRRLFALTIRDALKYLEKNI
PDLQRMAVAYMPLGTQEELRAQIIDVAMDRAFLQEPLPVDEAQFRQRVQDGRGRLTLIANEVARLAGVIL
QEYASAQRKIKDTKNAPEATQDAARQLKILMPRDFIAQAPWAQLQHFARYLKAITVRLDKYRADPARDAA
RMKELQPLEQRYWRLVAERKGQQDARMQEYRWMLEELRVSFFAQELRTPYPVSAKRLDKVWFQLVS
>gi|319763317|ref|YP_004127254.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MNVAPVPILAWARTPVAPVGGALAACQPHQLAAPLVERLLADAGLPARAVDAVVLGNALGAGGNPARVLA
LAAGLGERIPAVTLDSQCCAGLDAVTHACGLLALGQAQVVVAGGAEAWSRAPLRMHRPVQAGAAPVAYES
PAFTPWPERDPDMLQAALDAARRLRLSRGAQDAYALASHARAVAARGGMVAEIVPLCGLAYDAYPRTMTA
ARLARMPAVAAGQAQDGTDCGLGTAAVSPRADGAALLLLATPAACARWGLRPRAHWCGSASVGGAPEAPM
LCAIDAARAAQERSGWRLDALDALELHDAFAAQGLAFCSALGLPPGAVNRGGGGLARGHPIGASGAIALV
RVLAQLNAERRRRAAGALRGLACIAGAGGLGTATWVAMEEGARVRMD
>gi|319763318|ref|YP_004127255.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MAPAPGAPVRQLLAGGPLPPLFEWVHGPLAHWARTRPQALALANERRQLGFAELHARVQARARQLDAEGA
PATVLLGGEAGTLDGVVAFLGVVASGRCAAMGDAQWPASVAQAVARRLPACPGAVAAATPQSPFYVGFTS
GSTGLPKGFVRHHRSWAESFRVSLQDFGPAAAARVLAPGRMSHSLFLFGALLGLWTGAGAVLQERFSAPR
ALAALQSGAAPLLVAVPSQLVLMLQWAGRRRLAPIEGVELVLISGARWLRERTPALRRLFPRARIVEFYG
ASEASYIAWMDADPVAPAQAVGRPFSNVDLHIGPHPHAPALARGTPGLIWVRSPMLFMGYADQADATAAL
RAGEWLSVRDMGYLDDGGLLHLCGRENRMLVTQGKNLFPEEVEARLLAHPRVAQASLQGVADDLRGTSVH
AVLQWQGDAPPPGAQQLAAWCRAALEPFKTPRHWWVCTGGWPQTASGKTDHAALGRALAGASPLLEPWR
>gi|319763319|ref|YP_004127256.1| bioy protein [Alicycliphilus denitrificans BC]
MTTAVSRKASHSMALVALFAALMAVMGLIPKIDLPLGVPITLQSLGVMLAGCLLGARRGFQAMLLFLAAV
AAGLPLLAGGRGGLGVFMAPSAGYLVGYALAAGVTGALMRLLPQGTPLRTAASAFAASVLGGLVFLHAMG
IAGLVLLAQMPLDKALLADLVFVPGDLVKCVLCAVVVHTVARALPDWPFGGRER
>gi|319763320|ref|YP_004127257.1| cobalt transport protein [Alicycliphilus denitrificans BC]
MGSLYSEHLTWLHRWSAGRKLACMALLGTLLFLLSAPWALALAALACTLLWRSLGLATRVARRLMVSVLA
AALLVAVFHLWMGRPDMAAVSALRLACASTLGVALTVSTRPTDLLLVLDALLAPLARLGLQPGRVSLQLA
LMLRFTEHFFVQWKRLDEAHRLRTGRPGGLRLIAPLTVQMLQRAQRVADALYARLGG
>gi|319763321|ref|YP_004127258.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MPLTALNASSAAAPLLELRQVHLRRGATQVFAGLSLALAEPRIGLIGHNGAGKSSLLRLLCALELPGSGQ
VLSQGQDLQALPQGRLRAQRVGMMFQNPDDQIVFPTVEEELALGLAPLGLPRREALARARDFLAGRGLAG
WAARAVGALSQGQRQQLCWLALLLAGPRTLLLDEPFASLDLPGQARLADDIAACDRQVVVSTHVLDHVRD
YGRVIWLHEGHVRADGPGREVCAAYETAVARELADARGARAGMRVAA
>gi|319763322|ref|YP_004127259.1| hypothetical protein Alide_2640 [Alicycliphilus denitrificans BC]
MSAPSSPRARALRWLLAGAAILLGPGTALAQHGGHGGHGGGHPHGSFPHGSHWDGGHIHGGGSYRLGPGR
WAYRPGHAVHGFSRPDFVRWSGGHWRQTCWGGRCGWWWFTGGLWYFYAAPVYPYPPVVSSITYVPPVYAP
AATPGPASLAPQPTFSYYCDDPPGYYPAVPQCRTPWRESVTPVEPPPPADKP
>gi|319763323|ref|YP_004127260.1| hypothetical protein Alide_2641 [Alicycliphilus denitrificans BC]
MKPTSSPLLALALSCTLALVGCATQPMGPTVLVMPAPTKPFEVFQQDQAMCMQYAQSMVGGQAHAANDRA
VGSAAVGAVLGGVLGAAVGNHQGAGIGAASGAIVGTGVAGPSTAYSQGMIQYQYNNAYTQCMYARGNQVP
GFTR
>gi|319763324|ref|YP_004127261.1| lactoylglutathione lyase [Alicycliphilus denitrificans BC]
MRFLHTMLRVGDLQRSIDFYTRVLGMQLLRTSENPEYKYSLAFLGFGGGNPGQAEIELTYNWGVDHYEMG
TAYGHIALGVPDAYAACEKIKAAGGTVTREAGPVKGGTTVIAFVTDPDGYKIELIERKDDLVVGTGLR
>gi|319763325|ref|YP_004127262.1| gtp-binding protein hsr1-related protein [Alicycliphilus denitrificans BC]
MNHIADRVDDADELCLLARTDASEWGVADLSDVLLQLDGWLVRLDRDMAAGLPLPQGLHAAGALARQADA
INRLLQDCRACWARQRAGLQPAQALAEGFDDRLMLLVFGKFNAGKSSLCNFLADRFAAHGWPVRYFHLEA
GRIVESGDRLREGATETTARLQGVCLGERLVLLDTPGLHSVTPENAALTQRFTDSADGVLWLTSSSSPGQ
VQELHDLARELHRSKPLLPVITRSDVIEEDEIDGEIRKCLRNKTPANRALQEADVRQRALDKLRHMGVDP
RLLKAPVSVSAHAAREQGQTAAALEAAGFPRLYAALLDMLTPALAYKRRKPAEVLLHHAQENVLGAIGAE
ILPAIAGLQAALAQERERLRQYKTDMLRAAWRQVIPELPALLEQHDTPLPMLCAAVSRLMQQAIDELART
TLADYAVPGGSAVAISLPPLAPNHERLHAALQDAIRQQLDSAFGERLEHCGAALSQLADGAERLQGRLQQ
CGHPLQDIARELSMQTG
>gi|319763326|ref|YP_004127263.1| hypothetical protein Alide_2644 [Alicycliphilus denitrificans BC]
MDIHDTRSRSEGAIVSVLPQRAHDLARLRALAGQGRRQVVTVVGKYNHGKSRLLNELIGADTFTVADRRE
TVALSGHVHEDVRWLDAPGLDADVASGDDEHAHRAVWLESDIRLFVHAAKEGELDARECALLQALRDDGE
RTRRQTLFVLSQVDQLADEAAQRKVEAAIEAQAPDLAWLAVSSTRHRQGVDGAKKLLLEKSGIPALKAAL
AQALARVPAARAHEAALLLGEMREQLQRLCAERHDVLAGLRQQQAQQRTRFDQDLAAVLGQVGGDMQAVL
DVPGPDHSLTPDSFADQFKMTPGKLERNRLQVAYSKACIKIGAILTKHGAMDLPPAQQTQVKSLDSVMVA
VLGVSVKYRKDLQRLFCEAAGRDALARDFTRYFELSADRQALAVRIGQAQADAQAADKALAALAALEAGG
>gi|319763327|ref|YP_004127264.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MNSASQLAIPSLIDNERLGVFQWRVLALCFVIALFDGFDTQAIAFTGPAILAAFNLPAGSLAPILTAGIV
GMTIGAMTLGMVGDRIGRRPTIMLSLAIFGAATLATAWSTDTNHILVLRFIAGLGMGGCTPVLLALAAEY
GPARYRGAIMTGVLLGLPAGAMLGGLLAARMLPVIGWEGIFVVGGVAPLAMLVVLALLLPESLYFRATRG
DAEGQRYIASVLSKIVSRPLPGDVRFTVPESAVARASVRALFADGNAGKTVAIWAIYLLNWVAWFMLLSW
LPTVLKAGGLPAAQAPMGTVIVNAVFIVCAIPLSFVLPRVNTRRLLLVMFAVGIAVALGLSLAGQNWMLV
FALAGLAGFGVGGQQIALNYLIAGAYPTALRATATGWSIGMGRTGAILGSAIGGSFLAWGGPQGFFLALA
VPLIGAAIAVLSLRLSPPTANAALAAAH
>gi|319763328|ref|YP_004127265.1| hypothetical protein Alide_2646 [Alicycliphilus denitrificans BC]
MPIHRRACAILAAALVLPIASIAQTDTAWPGKPIKWVVPFPPGGAMDVIARTLGDQAARELGQPFVIENR
PGAGGNIGADYVAKQPADGYTIMITSIGMATNKALYAKLGYDPVKDFAPISLLAVVPNVLVVNAAKSPDR
SVKDVVARARREPGRLTYASAGNGTSIHLAGEVFASMAGVNLMHVPYKGSSPAVTDMLGGQVDLMFDSIT
SARPHIQSGKLRALGVTTAKRSSALPDVPTIAEAGVPGYEVSPWFAVFAPAGTPPGVVDKLNRVLNTAMQ
QPDIRRKLESVGAEPIGTTPQELAAHLNKELDRWGALIKARGIRMD
>gi|319763329|ref|YP_004127266.1| muconolactone delta-isomerase [Alicycliphilus denitrificans BC]
MLYLVHMIVDIPSTVPPEEAARIKAEEKAYSQALQRAGKWPHLWRVVGEYANYSVFDVESNDELHDTLSK
LPLFPFMKITVTPLAKHPSSIA
>gi|319763330|ref|YP_004127267.1| 3-oxoadipate enol-lactonase [Alicycliphilus denitrificans BC]
MGHSTIQLKTQRGEFRVAVDGDAAAPALILGNSLGTTLEMWEPQVAAFAGRFRLIRYDTRGHGGSPATPG
PYSFDDLGQDVLAVLDALDVERAAFCGISMGGHTGLWLGIHAGSRFSAIAVCNSAAKIGTEQAWNERAAM
VRADGAAGMRALADSAPGRWFTEGFAQTHPAVVLRAQGWIAGTAPEGYAACCEALATSDLRGSLGRIATP
TLLLAGASDPVTTVADAQAMQAAIPGARLAVVPASHLSNLEAPQAFDQAVLDFLAGS
>gi|319763331|ref|YP_004127268.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MNQRFEGKTMIVTGAAQGIGRGVALRAVAEGGRVLFVDRADFVAEVAAEAGGERALGFIADLETYEGARS
AMAFAAEAFGGIDILVNGVGGAIRMRPFAEFEPQQIDAEIRRSLMPTLYACHAVLPHLLRRGGGTIVNVS
SNATRGIRRGPYSAAKGGVNALTQSLAMEYAEHNIRVVATAPGGTNAPPRRIPRNADGDSAQEQAWMGEA
VRQVTESTFFKRYGSIDEQVAPILFLASEEAAYITGTVLPVAGGDLG
>gi|319763332|ref|YP_004127269.1| catechol 1,2-dioxygenase [Alicycliphilus denitrificans BC]
MSVHIFNTREVQDFLRLASGLNQEGGNPRAKQIIHRILSDLYKAIEDLDITSDEYWAGVAYLNQLGARGE
AGLLSPGLGLDRYFDMRMDAQDAALGVANGTPRTIEGPLYVAGAPVAQGFARLDDGSDTAGHTLIMHGTI
YGADGQPLPGAQVEVWHANTKGFYSHFDPTGEQKPFNMRRTIITDAQGRYRFQSIVPMGYGCPPDGPTQL
LLNQLGRHGNRPAHIHFFVTADGHRKLTTQINIDGDPLVYDDFAYATREGLVPPLVERTDAASIQANGLE
GPFAEIAFDMKLSALVNGVDNQIVDRPRLAA
>gi|319763333|ref|YP_004127270.1| muconate and chloromuconate cycloisomerase [Alicycliphilus denitrificans BC]
MQNPLRPQHSTGSVTIDQVETLLLDLPTIRPHKLSMATMNGQTLMLVRVRCSDGTVGIGEGTTIGGLAYG
AESPEGMKLAIDTYFAPQMVGADANRVPALMARLNQAIRDNRFAKCAVETALYDALGHRTGLPVSELLGG
RLRDRLPVAWTLASGDTGRDIEEAQRMLETRRHQIFKLKIGRKPVRDDVAHVAAIKKALGDLASVRVDVN
MAWSELQAHHGLAGLVHAGCELVEQPVASADVLARLKGRYPIAVMADESLTGPASAFGLAQVAGADVFAI
KTEQSGGLRAAQQVAAIADAAHIELYGGTMLEGGVGTIASAHVFSTFRELQWGTELFGPLLLTEEILATP
LEYKDFHLTVPAAPGLGIALDEDRVRHFRRDRQRVTVGPAA
>gi|319763334|ref|YP_004127271.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MNSQVIWFSLMELRQMRYFVAVATTRNFTRAAEQMHIAQPPLSRQIQQLEDELGVQLIQRNSRPVRLTEA
GRLVYEQALQVLHRVEQMKNAARQVGSNHRQSISVGYVASTLYGGLPVMVRMLRQRYPHTDVHLVELGSI
QQIHELKSGRIDLGFGRLRTNDSSVSRTVLSEERLVLAMAPSSPLAAENRRINLQTVADQRLIVYPKEPR
PSYADHVLGLLHDQGIQPAEIHEVRELQAALGLVAAEMGVCIVPTAARLRTDLVYRLIDDERATSPIILS
HRLNDDSWYIAAVKQLIAEMYAQNPPFISHLGSLEA
>gi|319763335|ref|YP_004127272.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [Alicycliphilus denitrificans BC]
MAVTSLTALQVMRDAPVIPVIVLHDVRYAVPLARALVAGGIRMLEVTLRTPEALDCMRAIAVEVSEAVVG
AGTVRSPADAEAAARAGARFAVSPGFTPALGRACRDQGLPLLPGTATGSEIMTAQEEGFSALKFFPAVQA
GGAAMLKAWQGPFGDVVFCPTGGIGPGNAADFLALPNVACVGGSWLVPGDALAQGDWARITQLAREAVAL
RI
>gi|319763336|ref|YP_004127273.1| 6-phosphogluconate dehydratase [Alicycliphilus denitrificans BC]
MSSHETVHTVTERIRQRSAATRGAYLQQLESHARRDRGAARLGCANVAHAFAAMPGSDKLRVVAQKAPNI
GIVTSYNDMLSAHAPLASYPGLIKDEARRCGATAQVAGGVPAMCDGVTQGTPGMELSLFSRDVIAMATAV
ALSHDVFDAALMLGVCDKIVPGLLVGALQFGYLPTVFVPAGPMTSGLSNSAKAKVREQAAQGLVGRGELL
QAEMAAYHSPGTCTFYGTANSNQMLLEAMGLHVPGTAFVNPGHALREELTREAARTVLGSAGAPCPPIGR
VVDERAIVNAMVALLATGGSTNHLIHWVAVARAAGIVIDWDDFSALSAAVPLLARVYPNGSADVNRFQAA
GGPGYVIRELLDAGLMHEDVLTVRPGGIREYTRVPEGDAGQRLRWADVDASRDDSVLRPAADPFSATGGL
KLLSGNLGRSVIKVSAVPRDHHVVEAPARVFASQGELLQAFQAGELERDVVCVVRWQGPRANGMPELHKL
TPPLAVLQGKGHKVALVTDGRMSGASGKVPAAIHASPEAHAGGPLARVRDGDPIRLDAVAGTLDVLIDAA
EWQARQPAAMPPGLHEDNAHGWGRELFVGFRRNALSAEEGACTWL
>gi|319763337|ref|YP_004127274.1| trap dicarboxylate transporter, dctp subunit [Alicycliphilus denitrificans BC]
MRIRFALAGLVAALVAAGAAQAQDFKPRIVRFGYGLVDNSNQGRAARMFAQEVEKASGGKMKVRAIGNAS
LGSDTQMQQALIGGAQEMMVGSTATLVGLVPEMAVWDTPFLFSSAKEADAVLDGPVGDKIKAKLEAKGMV
GLVYWENGFRNLTNSKRPVARLEDLNDIKLRVMQNNVFLDSFKALSANAVPLPFSELFTALETRAVDGQE
NPYNTIVSSKFYEVQKYLTVTNHVYSPWIVTVSKKWWDGLSTAEKKVLQDAAIKSRDFERKDTREEAAKA
LADLKGKGMQVNELSAQEANRMREKLASVNAGIAKSVGQQTWDEVNAAVQQMRNAK
>gi|319763338|ref|YP_004127275.1| trap dicarboxylate transporter, dctm subunit [Alicycliphilus denitrificans BC]
MIVTAIFLLVLIGGMVIGMPIAHALVLTGVALMWHLDFFDTQLLAQNLQAGFDNFPLLAVPFFILAGELM
NAGGLSRRIIDLARAFVGHIRGGLGFVVIGAAVLLASMSGSAIADTAALATILLPMMREQKYPMSYSAGL
LASGGIIAPIIPPSMPFVIYGVTTNTSISKLFLSGVAPGLMMGFFLIGAWWWIARRHGLPAMERVAWGPR
MKTLAKSFWAMMMPVIILGGLRGGIFTPTEAAVVAAVYALLVSMFVYRELNWQQLYGVFLAAGKTTAVVM
FLCGAATVTAYMITLADLPNMLADSFSGVMGSPVLFMALMMVFLLVVGTAMDLTPTILIFGPVCAPLAVR
AGIDPVYFGFMFIYVGCIGLITPPVGTVQNVVAGVGRLRMETVIKGTTPFLAVYVLLLVLFTLFPALITA
PLRWMH
>gi|319763339|ref|YP_004127276.1| tripartite ATP-independent periplasmic transporter dctq component [Alicycliphilus denitrificans BC]
MSDTSSSAAALPRKPLPQRLAEHFMVLALAGMVVAVFVNVVLRYVFSTSIVSYEEISRLLFVWLVAVGTI
VAAFEGKHLGFDMLTSRLKGRARKLLFWFSQALVAGGMLLLLKGSWEQVIAGMESYSTVLGYPLALGAAA
TLVLAVGLLAGVVVDLSRGEPLAHGSDADVSVE
>gi|319763340|ref|YP_004127277.1| carbohydrate kinase, thermoresistant glucokinase family [Alicycliphilus denitrificans BC]
MNFRPNAIVVMGVSGCGKSSVGEACAQALGWMLHEGDAYHAPQSIAKMRAGVPLTDADRAGWLDRLAALL
EPRPGAAGVVLTCSALRRKYRERLRAGNPRVGFVFLGLDYGQALGRVQSRAGHFFSPALVADQFATLESP
EDEPGVLMLDATRPVAELAQAVVHWLHGDGLAARPSSSLTGDNA
>gi|319763341|ref|YP_004127278.1| periplasmic binding protein/laci transcriptional regulator [Alicycliphilus denitrificans BC]
MTANRRQRRSSGRITLNDVAGAAGVSPITVSRTLRGERSVDPVLAQRVREAAERLGYVPDPAARALASQR
STQVLVLVPLLSNALFVDLLEAVHRTLFPEGFQPLIGVTHYDSAEEELLLRTYLPHRPAGLLVTGFDRSE
AARQLIVRSGVPCVHLMETSTAPGVACVGFSQQAAGATITRHLLERGRRRIAFCGAQLDPRVLQRAEGYR
STLREAGLYDPRLEMLSPERSSIALGARLFEDMVQRMPDIDAIFFCNDDIAQGGLLAANRLQIAVPGRIA
IAGFNDLAGSAQMVPPLTTIRTPRGEVGQAGATMLLGLMRGTLEQPQCIDLDYELIVREST
>gi|319763342|ref|YP_004127279.1| ATP-dependent clp protease, ATP-binding subunit clpa [Alicycliphilus denitrificans BC]
MIAQELEVSLHMAFVEARQQRHEFITVEHLLLALLDNPSAAEVLRACAANIDDLRASLTNFIKDNTPQVA
GTDEVDTQPTLGFQRVIQRAIMHVQSTGNGKKEVTGANVLVAIFGEKDSHAVYYLHQQGVTRLDVVNYIA
HGIKKGEPPEPAKPEGQAEAEDGGQGERSEKASPLEQYTQNLNQAARDGKIDPLIGRNYEVERTIQILCR
RRKNNPLLVGEAGVGKTAIAEGLAWRITQNDVPEILAEATVYSLDMGALLAGTKYRGDFEQRLKGVLKSL
KDKPNAILFIDEIHTLIGAGAASGGTLDASNLLKPALSSGALKCIGATTFTEYRGIFEKDAALSRRFQKV
DVVEPTVAETVDILKGLKSRFEEHHSVKYAAAALQAAAELSAKYINDRHLPDKAIDVIDEAGAAQRILTP
SKRKKTIGKTEIEEIVAKIARIPPANVSNDDRGKLQTLERDLKSVVFGQDKALEVLASAVKMARSGLGKG
DKPIGSFLFSGPTGVGKTEAAKQLAYIMGVDLIRFDMSEYMERHAVSRLIGAPPGYVGFDQGGLLTEAVT
KKPHAVLLLDEIEKAHPDIFNVLLQVMDHGTLTDNNGRKADFRNVIIIMTTNAGAETMNKATIGFTTQRQ
AGDEMGDIKRLFTPEFRNRLDAIVSFKPLDEQIILRVVDKFLLQLEQQLAEKKVEVTFTDALRKHLAKKG
FDPLMGARPMQRLIQDTIRKALADELLFGRLTEGGRLTVDIEHKTDEQGVESSEVLLDIQPLPKKDRGPR
SEPAEPEEATAD
>gi|319763343|ref|YP_004127280.1| ATP-dependent clp protease adaptor protein clps [Alicycliphilus denitrificans BC]
MKYMATRPPTPAPTPRLPSRDEGGSAVLERRTQKTKPPQMYQVVMLNDDYTPMEFVVVVLQEFFNKDREA
ATQIMLKIHLDGKGVCGVYTRDVAATKVEQVLDAAHRAGHPLQCVSEPVE
>gi|319763344|ref|YP_004127281.1| DNA polymerase iii, alpha subunit [Alicycliphilus denitrificans BC]
MFVHLRLHTEFSVVDGTTRIDEAVKAAAKDGQPALAVTDLNNLFGAVKFYKEGRGKGVKPIVGAEVCLEG
DAGAPPSRMVLLVQNRQGYLNLSELLTRAWTRNVVKNLPLCTWDWLAELNEGLIVLAGAQAGPVGQALMK
GDDDGAAAVALRLAGIFPHRFYIEIQRAGRADDEAHVTTAVQLAARLQLPVVATHPVQFATADGYEAHEA
RVCIAEGEILANQRRVRRFTREQYFKSGAEMQALFADVPSAIANTLEIAKRCNLTLVLGKPQLPDFPTPG
GMAIEEYFRVASYDGLKERLLHLFPDEAERERQRLRYEERLEFELGTILKMGFPGYFLIVGDFIQWAKNN
GCPVGPGRGSGAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQANRDRVIDYVKEKYGK
DAVSQIATFGTMAAKAAIRDVGRVMDMSYTFCDGISKLVPGKPGQTYTLAYPPEPKKEGDKNNYALELEP
MLYERVRKEEDVRTIIEMAQQLEGMTRNIGMHAGGVLIAPGKLTDFCPLYQQPGSESAVSQYDKDDVEAI
GLVKFDFLGLATLTILEIARDFIRARHKGQENFAFENVPLDDAPTYRLFADGMTEAVFQFESRGMQGMLK
EARPSRLEDLIALNALYRPGPMDLIPTFVNRKHGKEPVEYPHPLVEPVLAETYGIMVYQEQVMQTAQVLG
GYSLGGADMLRRAMGKKKPEEMAEHRLIFRKGAAEKGISQDKADEVFDLMEKFAGYGFNKSHAAAYSLLA
YHTGWLKVHYTAEFYCANMTVEMDDTDKLKVLYEDAVKHFGITFEPPDINRGNYRFEPVTDKVIRYGLGA
VKGTGQQAIEAIVAAREGQGVGPQGGTRGPFKSLFDFCVRVDRSRINKRTVEALIKAGAFDALHLNRAAL
VASIDRAFDFANAQLANANQGGLFDMMGDDAIGSSTQEPDLVEATPWGIKERLMQEKTAVGFYLSGHLFD
EVQQEVRRFVRTPMAELADSRETQVLAGIVGDCRVITGQRGKLALFKLDDKSGVIEASADEGVIAASAGA
LKDDELVVVSGRLQFDHFSGGLRVKVQQVWDLAGARARFGRYLLVGPRDGARPDVASIVREFPPRREETE
HGEVLAHGLRVRMGVRCQADAGAAVAELQLGEASRFFPSDSALAAWGAQAGSDNVSVVYENA
>gi|319763345|ref|YP_004127282.1| outer membrane assembly lipoprotein yfio [Alicycliphilus denitrificans BC]
MPRFSPSLISALLAAGLLAACASSPEDKTAGWSTDKIYAEARDELNGGAYDKAVPLLEKLEGRAAGTPLA
QQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPALDYALYLKGLVNFNENLGLFSWLSRQDLSERDQK
AAKDSFESFRELVTRFPESRYTPDARLRMTYIVNSLAQYEVHVARYYYQRGAYVAAISRAQSAITDYKDV
PATEEALYILVRSYDALGMTQLRDDAQRVLQASYPNSSLLSTGFKAKDNPWWKFW
>gi|319763346|ref|YP_004127283.1| helicase c2 [Alicycliphilus denitrificans BC]
MQLDDQVARAFAPEGPLARVLPHFCPRTGQTDMALAVAGAIGAPARLVVEAGTGVGKTFAYLVPALLSGR
RVLVSTATKALQDQLFGRDLPLLQRALALPLRPALLKGRSSYLCRHRLELARQDERAGDADLARDLGRIE
RWAQGTLTGDLAQLPDLDERSAAVALVTSTRDNCLGADCPRFQQCHVYQARREALAADVVVINHHLFFAD
LAVRESGVARLLPSAGVVIFDEAHQLAETAAQFLGAQLGTGQLLDLGQDLRAAGLRWARGLADWQALHDG
LRHAVRTLRLLAAGGGGDPGDHGAARVPWAGPAPDGVDPAQWADALHAVVAALRAALAALDGLAGLAPDL
QHLHQRTVALLERLAHFSAAGDGGRVRWLEVAGQPRMSESPLDVAPALHALWHGAPAPQGAWDEEGGAAQ
AADARSWVFTSATLGDDAGLRWFTEACGLQDARILRVPSPFDYARQAALYVPGQLPLPTDPAHSVQLAHW
VGDAVARLGGHTLVLTTSLRALQAVAAVLQKRFLPGGGIEVLVQGQAPKRQIMESFRSQAHAGGHPAGQV
LVGSATFWEGFDVPGDALQLLVIDKLPFPSPGDPLVRARSERLAREGRSAFRELALPAAAVALKQGAGRL
IRRESDRGVLVVADTRLVGKGYGKRLMRALPAMRRLASQEEFEAALDALTRTSTTDCPWP
>gi|319763347|ref|YP_004127284.1| protein phosphatase 2c domain protein [Alicycliphilus denitrificans BC]
MTKAFRISASTGIHKGDRTYQQDQVALLPHPRFNGCVLGVVADGMGGRSGGRKASDQVMLTARQLFERYS
PATDDAAALLKHIVQEAHIVIRLTAISAEQEPHSTIAAFVINPRGDCHWVHAGDSRIYHFQHGQLVFRTS
DHSYVQALVDRGELTEAEAGRHPHSNVLIGCLGAESDPPVTTHLIPQLQPGDMLLACSDGVWHYFSSAEL
ASVLDSLAPREASEFLIDKARARSRGGGDNLSLLVVKIEALADEKRLPRPVQLTPQA
>gi|319763348|ref|YP_004127285.1| hypothetical protein Alide_2666 [Alicycliphilus denitrificans BC]
MRPSDFLPAFTRMLIVLGATVLVPAQAAQPAAATAVQEEAARQAQLQRQARREQIQAERQAVQAQLGKDE
AACYQAFAVNDCLRKVRSKARAADNALRQQELQINDEERREKADQRMRSIEERRQEQQEKLQSGEKPAPP
RATERNNAQAREQEARQRAEQQRRRAAEHAADLERRKQAEQQRITESRARYEAKQQQARERRERHEREKA
EAAASGRKPPAPLPPGNQATP
>gi|319763349|ref|YP_004127286.1| afg1-family atpase [Alicycliphilus denitrificans BC]
MNVRQAYEAELAAKGFKSDPAQLRAVDALERCAQEWGQYKSRRSNALKKLINHPEIPKGVYMYGGVGRGK
SFLMDCFFNAVPLKRKVRLHFHEFMREVHRELAGLQGQQNPLDALGARIAKRYKLICFDEFHVADVTDAM
ILHRLLASLFDNGVGFVTTSNFKPDELYPDGLHRDRILPAIALLNERMEVVNVDNGTDYRRRTLENARLY
HCPLGPEADAAMRETFDLLAEVHDEDPVLHIEAREIRALRRAGGVVWFDFRDLCMGPRSQNDYLEIATQF
HTVLLSGVPYMPVNLASPARRFTWLVDVLYDRRVKLIVSAAVPPEELYTEGPLAHEFPRTVSRLNEMQSK
EYLQLERRMVDTGLT
>gi|319763350|ref|YP_004127287.1| dihydrolipoamide dehydrogenase [Alicycliphilus denitrificans BC]
MSKQFDVIVIGAGPGGYIAAIRAAQLGMNVACIDEWKNAAGGAAPGGTCTNVGCIPSKALLQSSEHFEHA
TKHFAEHGISTGKVTMDVATMIGRKDAVVKQNNDGILYLFKKNKVSFFHGRGSFARAVDGGYEVKVAGKA
EELLTARQVIVATGSNARALPGVEFDEVNVLSNDGALAIGAVPKKLGVIGSGVIGLEMGSVWRRLGADVT
ILEGLPTFLGAVDEQVAKEAKKAFDKQGLKIELGVKIGEVKNGKKGVSIAYANAKGEEQRLDVDKLIVSI
GRVPNTTGLNSEAVGLQLDERGAIVVDADCKTNLPGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGH
VNFNTIPWVIYTSPEIAWVGRTEQQLKQDGVKYKAGSFPFLANGRARALGDTTGFVKFLADAATDEILGV
HIVGPLASELISEAVVAMEFKASSEDIARICHAHPSLSEATKEAALAVDKRTLNF
>gi|319763351|ref|YP_004127288.1| 2-oxoglutarate dehydrogenase, e2 subunit, dihydrolipoamide succinyltransferase [Alicycliphilus denitrificans BC]
MAIVEVKVPQLSESVAEATLLQWKKKPGEAVAQDEILIEIETDKVVLEVPAPSAGVLAELLVGDGGTVVS
DQPIARIDTEGKAGAAAPAAAAPAAAAPAAAAAAPAAAGGGKGDVAMPAAAKILAENNLSAAQVAGSGKD
GRVTKGDALAAVAGGVKSTAAVIPTGVPAKALPQVAAPSSALDLGERPEQRVPMSRLRARVAERLLQSQS
TNAILTTFNEVNMAPVMELRKKFQDAFTKEHGVKLGFMSFFVKAAVHALKKYPVLNASVDGTDIVYHGYF
DIGIAVGSPRGLVVPILRNADQMSFADIEKKIAEFGKKAGEGKLGIEEMTGGTFSISNGGTFGSMMSTPI
INPPQSAILGVHATKDRAVVENGQVVVRPMNYLAMSYDHRIIDGREAVLGLVAMKDALEDPSRLLFDL
>gi|319763352|ref|YP_004127289.1| 2-oxoglutarate dehydrogenase, e1 subunit [Alicycliphilus denitrificans BC]
MSEPTSVYQAYQGNTYLFGGNAPYVEEMYENYLANPGSVPDSWREYFDALQHVPAVDGSNAKDVPHLPVI
NAFAERAKAGGTRVVVASTDAEMGRKRTAVQQLIAAYRNVGARWADLDPLKRAERPAIPELEPSFYGFAD
ADQETVFDTSNTFFGKDSMPLRELLNALRETYCGTVGAEYMYATDQAQKRWWQQKLESTRSKPAFDAAKK
KRILDRLTAAEGLERYLHTKYVGQKRFSLEGGESFIAAMDELIQSAGAKGVQEVVIGMAHRGRLNVLVNT
LGKMPKDLFAEFDHTAPEDLPAGDVKYHQGFSSDVSTPGGPVHLSLAFNPSHLEIVNPVVEGSVRSRMDR
RADPKGKQVLPVLVHGDAAFAGQGVNQETLALSETRGYTTGGTVHIIINNQIGFTTSDPRDLRSTLYCTD
IVKMIESPVLHVNGDDPESVCLAMQLALEFRMEFSRDVVVDIICYRKLGHNEQDTPMLTQPLMYKKIAQH
PGTRKLYADKLATQGLGETLGDDMVKAYRAAMDEGKHTIDPVLTNFKSKYAVDWSPFLGKTWTDAADTAI
PLTEWKRLAERITTIPESVTPHMLVKKVYDDRAAMGRGEINVDWGMGEHMAFASLVASGYPVRLSGEDSG
RGTFTHRHAVIHDQKREKWDEGTYVPLQNVAENQAPFVVIDSILSEEAVLAFEYGYASNDPNTLVVWEAQ
FGDFANGAQVVIDQFIASGEVKWGRVNGITLMLPHGYEGQGPEHSSARLERFMQLAADANMQIVQPTTAS
QIFHVLRRQMVRNLRKPLVIMTPKSLLRNKDATSPLSEFTKGGFQTVLGERDEAIAKNAAKVKRVIACSG
KVYYDLVKKRAEAERSDVAIIRIEQLYPFPHKAFAAELKKYPNATDIVWCQDEPQNQGAWFFIQHNIHEN
MHEGQKLGYAGRAASASPAVGYAHLHQDQQKALVEAAFAKLKGFVLTK
>gi|319763353|ref|YP_004127290.1| hypothetical protein Alide_2671 [Alicycliphilus denitrificans BC]
MHPLLLQNRTLLLLLAAVTLAFGAILWPLNGAIFWGVVLAILFTPLHRRLLRRMPRRRNLAAFITLCICL
VIVILPMVFIGISLVQEASVAYERARSGQLNYGAYLQQVLAALPAWVLELLDRFHLTSMAELQARLTAVG
AQASQFLATKALDVGQNTLQFIVSFGVMLYLLFFLLRDGPRLAARIRQAIPLDTEHKNQLARKFTTVIRA
TVKGNIVVAAAQGALGGLIFWILGIQGPVMWGVLMAFLSLLPAVGASLIWGPVAIYFLATGSTGQAAILT
AYGVGVIGLVDNLLRPLLVGKDTKMPDYVVLISTLGGMALFGLTGFVIGPVIAALFMATWDLFAPVDDGQ
SS
>gi|319763354|ref|YP_004127291.1| hypothetical protein Alide_2672 [Alicycliphilus denitrificans BC]
MNPSTHRRRALATAAAALALALAGTAGAQAPYPAKAITFVVPFAAGSATDQLARALGQSVSTDTRQPVVV
DNKAGASGMIAAQAVAKAAPDGYTVLITTNTTHAANEHLYKKLPYDPVKDFAPVTGLGKGGQVLVVNASA
PYKSVAELLAAAKKNPGKLSFGSGSSSSRMAGEMLKQLAGVDILHVPYKSNPLAITDLLGGQIDMMITDT
STGVPQIKAGKLRALGYSTQKRGAQLPDVPTIAEAGVKGYDMGYWFAAYVPAGTPAPVVARLNELLAHAT
RSEAARSFFDTAGSEAWTTTPEELARFQAAETQKWGRVIKAAGIEPE
>gi|319763355|ref|YP_004127292.1| hypothetical protein Alide_2673 [Alicycliphilus denitrificans BC]
MTDTDLTVPLYRLAHGRTGDKGNRSNISVIAWHPALWNLLVEQVTEQAVARQFALRRPSRVARHLLPQLH
AMNFVLDGVLDGGVNDALNLDSHGKALSFLLLDLPVRVPAALARHLAGPR
>gi|319763356|ref|YP_004127293.1| hypothetical protein Alide_2674 [Alicycliphilus denitrificans BC]
MANPSSLLIGCAAGFSGDRTDAAAPVVQALVDSGRPAVLIFETLAERTLALAQLARRADPGAGYEPLLDE
LLRPVLAQCLRHGVRIVSNFGAANPQGAALRILQLAAELGARRPRVAVVHGDDLSGPQHRALLAQALGQD
MPAQPVVSANAYIGAEPIADALRAGADIVVCGRVADPSLVLGPALAHYGWAMDDWDRLARATMAGHLLEC
GAQVTGGYFADPGYKDVPGMARLGYPIAEIDADGHCTITKPGGTGGRVDERTVKEQLLYELHDPAAYLTP
DVVADITQARVAQAGADRVRLEGVRGHARPPSLKVNVCFESGWFAEGEISYAGARAEARARLGGEVLRER
LAGVAPLRVDLIGVASVFADDAGRWLQAHAGQDAQDVRLRVALQHQDHASAQRLVREVTALYCCGPAGGG
GVRTAMRPRLGTVSCLVPRAAVETGFTLLD
>gi|319763357|ref|YP_004127294.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MNISSRQIDAFLALAAQRSFTRAAAQCHLSQPAFSALIRALEDGLGLRLFDRSTRHVGLTAEGENFHASA
LRIRAEVDAALAAMRDAATLRRGRVAIALLPSLAAGWLPGVLAGFHARHPGVELDIADVLSEPCIERVAT
GRADFALAAIRADTPELQAEPFCRDGFHLVCRTDHPLAARPLPGGAPASLRALAQWPFIHLARHSSVRQY
LEAAFHPQAMRTVMEVEQLATVTGMVRAGLGISVVPTFTLFHFQHPDLATRPLTLPGLTRQIYLVRRRDR
NLSAAAQALHAHVLRERPRSD
>gi|319763358|ref|YP_004127295.1| uspa domain-containing protein [Alicycliphilus denitrificans BC]
MTTQNTVYACIDGLATTHAVVDGAAWAAQRLGAHLALLHVLQQPEPLPPVGDYSGVIGMGAQDLLLERLN
TLDEERTRLAREAARRMMEQARLRVPESAAGALQILLRQGDLTDALLECEPSARLFVLGSNRQATSPRKL
RLDHRVESVVRQVRQPVLVMTRPDFSAPGSFVVAYDGSATAHHAIEAVARSPLLRGMPGLLAMASEATPQ
AQKHLDEAQALLGQAGFEVGTQFVAGPPEEAIPALMEKRGDALLVLGAYGHSRIRQLIVGSTTTALLRLC
SVPMLVLR
>gi|319763359|ref|YP_004127296.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MRATAPMNPQTPPLLQVQDLRVRFGAKEVVHGVSFDIAPGEKLALVGESGSGKTVTALALLRLAGDAQLE
GRALMQGRDLLQLPERELRGVRGGDIAMVFQEPMTALNPLMPVGEQVAEVLMLKQALTQAQSAQAAIELL
ASTGIPEPARRAGSFPHQLSGGQRQRAMIAMALASRPRLLLADEPTTALDVTLRGQILNLLSDLQRQTGM
AVLLITHDLLLVRRFADRVAVMEQGALVEQGTVAQVFGAPRHDYTRRLIGSTPRRDVAEGAPAEGAVPAA
QAGALSVAYPVPLPGFRGWFSKGEFVAVKGVGFRIQHARTLGVVGESGSGKSTLAQALLGLLPARGELQV
AGQSWQQPAQHNSTHNQLLRRQVQVVFQDPFSSLSPRMTVEEIVGEGLHVHEPRLPVPERRSRVAAMLAE
VGLTEAQFPGLLSRYPHEFSGGQRQRLAIARALILQPQLLVLDEPTSALDVTIQQQVLGLLQRLQKERAL
SYLLITHDVAVVRAMAHEVLVMKDGEVVESGSVRQVLDAPRHPYTQRLVEAARPL
>gi|319763360|ref|YP_004127297.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MSSSTDSVSLSPARRAWLRFKRNRLGFWSLVVFCTLVVVSLGAELVSNDRPLIVRYEGQTYFPMLKDYPE
TTFGGDFQTPTDYLDPFVRQRLSEGGNWALYTLNPYGPQTLNYFAKEPNPSGPSRENWLGTDDRGRDLLA
QLIYGFRVSVLFGIALTVVGVLLGVAAGAVQGFFGGKTDLAFQRFIEIWGSMPELYLLIIFSAVFAPSIA
LLLVLLSLFGWMGLSDYVRAEFLRNRQLDYVKAARALGVKSGQIIWRHILPNSMTPVVTFLPFRMGAAIL
ALTSLDFLGLGVPPGTPSLGELLSQGKNNIDAWWISIFTFAVLVSTLLLLTFMGDALRDALDPRKN
>gi|319763361|ref|YP_004127298.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MFAYILKRILLMLPTLLGVLLLTFVVIQFVPGGPVEQYLAEAKAGVAGMGGGGEGGGMAYRGAQGVDPKR
LAQIKALYGFDKPAHERFVQMLGQFARFDLGRSFFQNKDVWQLVKEKLPVSISLGLWTFFISYLVAVPLG
VAKAVRAGSRFDLVTTLIILVGYAIPGFVLGVALLVVFGGQLQWFPLRGLTSANWEELGLWAKVTDYLWH
ITLPVTAMVAGSFAVTAMLTKNAFLEEIRKQYVLTARAKGLGERQVLYRHVFRNALIPIITGFPSAFIGA
FFAGSLLIETLFSLDGLGLLSYESVIRRDYPVVLGTLYLFTLIGLVTKLVSDLCYVWVDPRVKFD
>gi|319763362|ref|YP_004127299.1| protein-s-isoprenylcysteine methyltransferase-like protein [Alicycliphilus denitrificans BC]
MFNLEHKIPPPVIGLACAGLAWWLARAAPALALQMPGRLALVAVLASAGLALELWGLWTFRRHGTTPNPL
APGRASTVVQSGPYRFTRNPMYLGMAVQLLAWCAYLGSPLSLLALAVFVAYITRFQILPEERALRALFGE
PYQRYLQRVRRWI
>gi|319763363|ref|YP_004127300.1| extracellular solute-binding protein family 5 [Alicycliphilus denitrificans BC]
MRYRLICSLSLLCLALYSGSPARAAHAYAMWGEPALPAGFDHLPYVNPGAPKGGELRLVSNLRASTFDKY
NPFTIRGNAPAYLSALMFDTLLSGSLAETATGYGLLAEDVAVAPDGLSATFRLRPEARFHNGKPVLAMDV
KHSFDTLVGPYTSPAYKTMLIEVAGVDVLDERTVRYRFHKPNRELPLTVGGLPVFSRDWGLGEDGKPKPF
DQVVMDIPIGSGPYRIGPVNFGKDITYVRDPQYWARDLPVRRGTANFDRVLIKIYKDNTARLEALKAGEF
DLMRFFSAGDWARRVNGKKFDTGELVKAEFPNKLPTGFQSYVLNTRRPLLADRRVREALGLAFDFEWMSR
QLFYGAYQRVHGIFGNTMCETHGNPTPAELALLEPWRKELPPEVFGPMYEPPVTKDAMALREHLRRALAL
LREAGWEVRDGVLRNARGEPFVLEYMDSSEGGVRTLSSWQRNLAKLGITLRFRSVDFALYQQRLQKFDFD
ITTIAYQGTNNPGQEFADLFGSQAADQEDSGNFPGVKNPAVDAAIRAMVSARTLDQVLPACHALDRIIAH
EHYLIPQWSAPTHRMVYNAWRLARPQVVPPYSPGEMWVVDTWWAQKP
>gi|319763364|ref|YP_004127301.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MGFLAGKKLLITGVLSNRSIAYGIARACHQQGAELAFSYVGERFKDRISEFAAEFGSKLVFDCDVADDAQ
IEKMFEDLGTAWGKFDGFVHSIGFAPREAIAGNFLEGLSREGFRIAHDISAYSFPAMAKAALPYLNDKSS
LLTLSYLGALRSIPNYNTMGLAKASLEASVRYLAEAVGRTQDGRAIRANGISAGPIKTLAASGIKDFGKL
LGRVADAAPLRRNVTIEDVGNVAAFLLSDLASGVTAEITYVDGGFSQTAGLSADQV
>gi|319763365|ref|YP_004127302.1| multidrug resistance efflux transporter [Alicycliphilus denitrificans BC]
MKNRNKATLIGLVAIFLWSAIVGLIRSVSDHLGPTGGAAMMYSVASVFLLLSVGWVGLREFPRRYLAWGS
LLFVAYELCLSLSIGYADTSRQAIEVGMVNYLWPTFTIVAAIPFNRQRANFLIVPGFVLSIIGIGWVLGG
EQGFDLPGMLDNVQDNPLSYGLAFAGALIWAAYCTVTARIACGKNGVTLFFVLVSVALWAKYLVEGGGAM
AFGFEAVVYLVLAAAAMGFGYGAWNVGILHGNVTILAGASYFIPVFSAALSMLLLRTPLSLAFWQGAAMV
CGGAILCWLATRGPRAKQARTR
>gi|319763366|ref|YP_004127303.1| hypothetical protein Alide_2684 [Alicycliphilus denitrificans BC]
MFPEYRDLITKIKGQDLHFTRLFDKHNELDQRIKNMEARIVAATMQEIETLKKEKLLLKDQIYAHLRRLE
GAQA
>gi|319763367|ref|YP_004127304.1| DNA ligase (ATP) [Alicycliphilus denitrificans BC]
MRPTLPGPLEGGHAPWCVFRMNRLPILRWQLWILIVLGCMAAHAAPPSPTLARRYHTGIDVTAYWVSEKY
DGVRALWTGRQLLSRQGLPIRAPAWFTAGWPAEPLDGELWAGRGRFDAAQAAVAAAAPDDAQWRALRYMV
FDLPAAPGGFGARLPTLQHAVAALGQPWVQAAPQWRVATRAQLMGQLREHEKAGAEGLMLRRDDAPYRGG
RSEDLLKLKSFEDAEGLVVGHVPGRGKYAGQTGALLVAMPGGRRFRLGSGQPDALRRQPPPVGSVVTYRF
NGTHASGLPRFARFWRVRADEPLN
>gi|319763368|ref|YP_004127305.1| integral membrane protein terc [Alicycliphilus denitrificans BC]
MDFLTSAEFWAALGQVIVIDIILGGDNAVVIALACRRLPPAQRSKGIVFGTAGAIVLRVILIAFAMALLD
IPFLKLVGALLLVWIGVKLLAPDEDGHGDIQGSDKLLSAIKTIVMADLLMSMDNVIAIAGAAQNSGEHSL
LLVILGLLFSIPIIVLGSQLVIRLMERFPLIITAGGMLLGWIAGGMLVTDPAFVDPDQWTWMPKPVTVDA
QGEAVIPGPLYWAAHVAGALLVLALGKLLASRQKGALAH
>gi|319763369|ref|YP_004127306.1| lysine decarboxylase [Alicycliphilus denitrificans BC]
MKFRFPIVIIDEDYRSENTSGLGIRALAQAIEAEGFEVLGVTSYGDLSQFAQQQSRASAFILSIDDEEFT
LGTGQDPIIHSLRSFITEVRRKNAEVPIYVHGETKTARHLPNDILRELHGFIHMFEDTPEFVAKHIIREA
KSYLEGVQPPFFKALLDYAEDGSYSWHCPGHSGGVAFLKSPVGQMYHQFYGENMLRADVCNAVEELGQLL
DHNGAIGESERNAARIFNADHCFFVTNGTSTSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGAIPVF
LKPTRNHFGIIGPIPQAEFDPATIQAKIRANPLLKGVDAKTVKPRVLTLTQSTYDGVLYNTETIKGMLDG
YVDNLHFDEAWLPHAAFHPFYGSFHAMGKKRARPRHSVVYATQSIHKLLAGISQASHVLVQDSQTTKLDR
HLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESLVEALDFRRAMRQVEDEFGKDDWWFKVW
GPDALVEEGLGTAESWIFRNKGKKKNGAARWHGFGDLADGFNMLDPIKSTIVTPGLNLDGKFDKTGIPAS
IVTKYLAEHGVVVEKTGLYSFFIMFTIGITKGRWNTLLAALQQFKDDYEKNQPMWRILPEFCQQHKRYER
MGLKDLCQHVHQLYAKYDIARLTTEMYLSDLTPAMKPSDAYAHIAQRKTERVAIDQLEGRITTSLITPYP
PGIPLLIPGEVFNKKIVDYLKFAREFAKLCPGFETDIHGLVEIEDDHGNVSYYADCVAETGRAANAPRPK
GKLVQVGDDGPFGRTL
>gi|319763370|ref|YP_004127307.1| hypothetical protein Alide_2688 [Alicycliphilus denitrificans BC]
MNLDASTLWWLMAGVAVAIELLTGTFYLLMLAIGLAAGAVAAHAGLGTTAQILVSAVVGASTVLGAYLSR
RSRPGEPSARAERSVNLDVGETIYIDAWQADGTAIVKYRGASWTAIHRPGITPATGPHRVAELVGNRLLV
DPL
>gi|319763371|ref|YP_004127308.1| band 7 protein [Alicycliphilus denitrificans BC]
MEVAIVLFVIAVIFIARAVKIVPQQHAWVKERLGKYAGTLSPGPKFIIPFVDRIAYKHSLKEIPLDVPSQ
ICITKDNTQLQVDGILYFQVTDPMRASYGSSNYITAVTQLAQTSLRSVIGRLELDKTFEERDMINAQVVA
AIDEAALNWGVKVLRYEIKDLTPPAEILRAMQAQITAEREKRALIAASEGRRQEQINIATGEREAFIARS
EGEKQAAINNAQGEAAAITAVAEATATAIERIAAAISQPSGDQAVQLKVAEKAVDAYSKVAADATTTLIV
PSNMTEVSALVSSAMKMIQTGQQRG
>gi|319763372|ref|YP_004127309.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MFRKTFLPPIADLLAFEAAARHASISRAAQELHLTQSAVSRQIRQLEQQLGMALFHRVRQRIVLTDAGRV
YAADVRAALQQLSAGTQKAMAFSHAAGLLNLAVLPTLGTRWLIPRLGAFMARHPDVTVNFAARTEPFEFA
GTPLDAAIHFGAPTWAGAVCEFLMREEVVPVASPGFRARHSIGTPQDLTRVLLLQQSTRPTQWAEWFEHV
GIATTVALRGPRAEHFSMIAQAAACGQGAALLPRFLIEQELADGSLEELFPDALVSADAYYLVYPEARAQ
TPLVKAFRDWLVAECAGSAG
>gi|319763373|ref|YP_004127310.1| thiamine pyrophosphate tpp-binding domain-containing protein [Alicycliphilus denitrificans BC]
MNAILKKAKPMATNPAPSPTPRTGGQILVRQLIAHGVKQLFCVPGESYLAVLDALHDADIAVTVCRQEGG
AAMMAEAQGKLTGRPGICFVTRGPGATNASAGVHIAHQDSTPLILFVGQVARGAKGREAFQELDYRAVFG
TMAKWVVDIDDPARLPELVSRAFHVATSGRPGPVVVALPEDMLTATASVADALPYQVAETHPGAPALQEL
GERLQAAERPVVILGGSRWSEQAVRNVSTFAEAWQLPVYCSFRRQMLFPASHASYAGDLGLGVNPKLLAR
IRTSDLVLVLGGRLSEIPSQGYELFSIPNPEQPMVHMHADADELGSLYRPAQAIHATPQAMAAALARLLP
AAAPRWSAHTQAARAEYLAWSDPAPIRIPGSLQMGEVMQHLKEALPADTIFCNGAGNFATWVHRFWPFTH
YASQLAPTSGSMGYGLPAGVGAKRLWPEREVVVFAGDGDFLMHGQEFATAVQYGLPLIVVLLDNAMYGTI
RMHQEREYPGRISATELKNPDFKAYAQAFGGHGERVERTEDFAPALARARASGLPALLHCLIDPQAITPT
GTLDGIRTAALARD
>gi|319763374|ref|YP_004127311.1| hypothetical protein Alide_2692 [Alicycliphilus denitrificans BC]
MELLRTFALFVLTALAEIVGCYLPYLWLKQDKTAWLLLPAAASLALFAWLLSLHPTAAGRVYAAYGGVYI
GVAIIWLMLVDKVKPTGTDWLGVAVSMMGMVIIMLGRRSN
>gi|319763375|ref|YP_004127312.1| integrase family protein [Alicycliphilus denitrificans BC]
MGNTDIKALREPWNKGKIVGQKAPFKLKDIWALRVRFQMEHRVRELALFNLGIDSKLRGCDLVALKVRDI
CHGDQVATRAIVLQHKTQRPVQFEITPATRDALQAWIKQAGLKSDDFLFPSRLHDSPHLGTRQYARILGH
WVEELGLDRADYGTHSMRRTKATLIYRRTKNLRAVQLLLGHSKLESTVRYLGIEVDDALEISEQTEI
>gi|319763376|ref|YP_004127313.1| arsenical resistance protein arsh [Alicycliphilus denitrificans BC]
MPDDKQLLADLPQVASEHFCVPDLAQLHPAQPSTHAPRFLLLYGSLRERSFSRLLVEEAARLLTAMGGEV
RIFNPSGLPLPDDAPDTHPKVQELRELCNWAEGMVWCSPERHGAMTGIMKAQIDWIPLSMGAIRPTQGKT
LAVMQVCGGSQSFNAVNQMRVLGRWMRMITIPNQSSVAKAFMEFDEHDRMKPSSYHDRVVDVLEELVKFT
LLTRDISGYLVDRYSERKESAEALMKRVNQASI
>gi|319763377|ref|YP_004127314.1| atpase, p-type (transporting), had superfamily, subfamily ic [Alicycliphilus denitrificans BC]
MDTQAQAPNPAQLDSQTVAERLDVDPDRGLSASEAQNRLERDGPNVLRVDPPTPAWRLLLSQLQDPLVYL
LLAAVFVTLLLWLAEGAVGWPIDAVVILVIVVLNALLGFMQEVRSQRAAAALARLTAVTSEVLRDGVRLR
VSSADLVRGDLLLLSEGDRVGADARLLQANALRVQEASLTGESEAVLKDAATLKEPVPLAERRNMVFKGT
AVVQGTGMALVTATGMATEMGRIAHLLATTPEQATPLQKEVRQIGVMLGRAVLLIALVVVLTVLMMTEVR
SLADVEGVLLLGVSLAVAAVPEGLPAILSLVLAIGVQRMAKRQAIVKKLSSVETLGSASVICTDKTGTLT
RSEMAIEKVLTASGCSCPEGVGYEPVGDIRHQGEILAPGPLHSELVLMLSGGSLAGNADLRQKADGSWVI
QGDPTEAAFLVAEHKLGVHERRRERFERIAEIPFTSERKRMSVLAIDHEHDDQRVIIVKGAPDVLLQRCS
QARVGMDVVPMSDAILARAQADVDKLSDAALRTLSVAYRPLGADEEAQAGETLEQDLIFVGTVGIIDPPR
AEVASAIQEAQRAGIRIIMITGDHPRTAARIASDLGIIEAGGSALTGPQLDALDDAGLAEAVRTTSVYAR
VDPSHKLRIVDALQAQGHVVAMTGDGVNDAPALKSADIGVAMGITGTEVTKEAGKMILADDNFATIVAAV
REGRGILDNIRKFLRYLLSSNMGEVLTVFLAVLGARWIGLTDQVGNVVLPLLATQILWINLITDSGPALA
MGIDPQTDDVMGRRPRRPDERIIDARMWSGVMQIGLMMALATLFTLDLFLPGGMIEGAQSLETARTAAFT
VLVFAQLFNAFNARSETGSAWRGLWANRWLWATVGLGVMLQVAVVHLAFLNLAFGTQSLDAWQWLQCVAI
ASSVLLYSECRKWLARRMDGNQGR
>gi|319763378|ref|YP_004127315.1| RNA polymerase sigma factor, sigma-70 family [Alicycliphilus denitrificans BC]
MAAWHAHEGELHRWLTRHLNDPVTAQDLLQDVFIKALRQGSRFCDVANARAWLFEVSRNALTDHLRRHHD
LDALPDDVPALEADPPAAVDSLATCLPRVLSELSEADRDAIVQCDLNGMSQEDYAQKLGITLPGAKSRVQ
RARKRLRERLLTSCKVVLNARGAVCCFTPRPP
>gi|319763379|ref|YP_004127316.1| hypothetical protein Alide_2697 [Alicycliphilus denitrificans BC]
MCMGYAKDIRAWACTQEIGRREAALRQWGDLLHPEDDDAQVANQIQPPAVAQSAPLQCAPELAQEA
>gi|319763380|ref|YP_004127317.1| permease [Alicycliphilus denitrificans BC]
MRSSALNPSKVSPLMRWLLALGLLVPAWWWSYTHLTGFADAVLHQLGLTRQTSLGEAVHFFLFDTPKVLL
LLTGVVFVMGVVQTFFAPERTRAMLAGKREGVGNILAALLGIVTPFCSCSAVPLFIGILSAGVPLGVTFS
FLISAPMVNEVALVMLMGLFGWKVAALYLVLGLTVAIVAGIVIGRLGMERYLEDWVQAVAKGQGSASYEG
DGLTWAERFQAGANHVREIVGKVWPYVVAGIALGAGIHGYVPEDFMAAIMGRDAWWSVPVAVLLGVPMYT
NAAGVIPIVQALLGKGAALGTVLAFMMSVIALSAPEMIILRKALKPRLIATFAGVVALGILLVGYIFNLV
L
>gi|319763381|ref|YP_004127318.1| thiol-disulfide isomerase and thioredoxin [Alicycliphilus denitrificans BC]
MKDIKVLGSGCANCKTTIALIEQVAQDKGVAVKVDKVQDIQAIIAYGVMATPGVVVDGKVVHAGGLPKRD
KIEEWLA
>gi|319763382|ref|YP_004127319.1| osmc family protein [Alicycliphilus denitrificans BC]
MTEPAKPKMVFDVVSVRLSAQVSQAHCKQATIALDTDMAGNPQAFNPAELLLAALSACMIKGIERVIPIL
KFELRGVEVHVHGVRQDVPPKMESISYDIIVDTDEPDRRLALLHDNVKKYGTVFNTVAPGTELSGVLRRK
EAGDS
>gi|319763383|ref|YP_004127320.1| cation diffusion facilitator family transporter [Alicycliphilus denitrificans BC]
MSAAQDHHSHAPASYNQAFGIGIALNILFVVVEAFYGWKINSLALLADAGHNLSDVAGLVLAWGGALAGR
LHPDDRHSYGWKRASILAAFINAMLLLVAMGSLAWEAVDRLNDPHPIEGVTIMVVAGLGIVINSVTALLF
MRGSHDLNIRGAFLHMVADALVSAGVVVAGGLALWMGWNWLDPIVSLVIAVVIVVGTWGLFKQSVHLLFD
GVPSNVDLPAVRAWLLTLPGVTRVHDLHIWAMGTSEVALTAHLVMPAGHPDDAFFQSLTHQLHDRFDIEH
VTVQVVRAPFTPPCSGG
>gi|319763384|ref|YP_004127321.1| hypothetical protein Alide_2702 [Alicycliphilus denitrificans BC]
MMDTAALPLNTAEALNLGCYCRTLSAEKLQRQLETDASLSGMAQDIARTRPHLFSSTVVFLAQPVVDQMR
LAVQVLERVMALPAYQAQALARAPAIARHEFGPLGMFMGYDFHLGAQGPRLIEVNTNAGGALLNAALARA
QQSCCEAMNWAFKPDPALAGLEDALFEMFTREWRCQRGDTSMGLVAIVDDDPTAQYLAPEFELCRQMLQQ
RGLDARIVAPETLEWHGGKLLVDGNVVSMVYNRLTDFYLAEPAHGALKSAYEAGAVVMSPHPRAHALHAE
KRNLVALSDATLQASWGVSEADRALLAAVVPQTVQVTPDRSDELWAQRRQWFFKPESGYGGKAVYRGDKL
TRRVWQDITAGGFVAQAMVPPSERLIEVGGVQTDLKFDIRAYAYAGQVQLLAARMYTGQTTNFRTTGGGF
APVVIVP
>gi|319763385|ref|YP_004127322.1| glutamine amidotransferase class-ii [Alicycliphilus denitrificans BC]
MCELLAMSSSRPSHLTFSLQALTEHSLHGSRDGWGAAFYAGRDVALYREPAAASGSALVDFLQTQGPSTT
LAISHIRHATMGEVALANTQPFVREMAGRMHTFAHNGTLPGIAHHPGFALGRYRPIGDTDSEHAFCVLLD
RIHDLWATTEVPTLDARLSVISAFSSELRPLGPANFFYADSDVLFAHGDRRLQAEDGRTRSPGLWVLERR
CEDSDKALHADGISIEPGFQDLALIASVALTGGAWRAFAEGEVVAISMGTVLKSSMPESVPTHPLVLTVV
GYGEAVQRMQKRVQCAAQALGKLVTLDTSTSLDEYGLRYEDTPALVHQGAVVLNGLSRTEEIEAWLMGFM
SDG
>gi|319763386|ref|YP_004127323.1| oxidoreductase fad-binding domain protein [Alicycliphilus denitrificans BC]
MPNPQFTKPWHGVPRDQIHWSPSIIEDACIGCGTCVTGCSRLVYRFDFDRKKPVVVDPLNCMVGCTTCAN
TCPAHAIAFPPIETVLALEGSGQVRHAVEDDLLARRDVLAATESLPHPDRIILLDVVHIEHIGKDVMRVQ
FKPAQPGECFCEFSPGQYIELWQPESSHLSRSYSIANSPHGDGNITLHIRRVEGGRFTDWAFNDMKVGDT
VQARGPLGSFTMRSRPETPLLFMAGGTGLAPVLALLEQQSRFAPQRDMVLIWGMQNPDAFYALDDLHALM
AQAPGLQVYLASAEGGVGQASVDGRLHRFIGTVVDALTQNLALLGTRDVYVAGPPVMLREVVRTLEAEHV
DSARVHIDSFGV
>gi|319763387|ref|YP_004127324.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MSQPEVVICQPVRTAIGTYGGSLKDVAAPDLGATVIRETLKRADLSADKVQSLIMGNVIQAGVKMNPARQ
AGIGSGMPVEVPAMTVNRVCGSGAQAIASAALEIWAGMTQVAVAGGMENMDRAPYLLPQGRWGARMGDVA
LVDSMLYDGLNDAFSGKHSGWHTEDLVTLKNISREDQDRWALRSQQRFSDAQAAGKFDAEIVTVEVPGRK
GPTLFARDEHNRPETTAESLAKLKAAFRKEGTITAGNAPGLNTGAAAMIVAERRWAEAQGLQPVARLVSY
GLGAVEPGMFGLGPVPAVRQALERAQWATGDIERIEINEAFAAITLACLRELGLPEDIVNVDGGAIAHGH
AIGATGAILTTRLLHAMQRDSLKRGVVTLCIGGGQGIALALERI
>gi|319763388|ref|YP_004127325.1| hypothetical protein Alide_2706 [Alicycliphilus denitrificans BC]
METPIHHLSDLFAQLGLPSDPDAVDTFIRTHRPLPAGVALADAPCWTPSQAQFLREQVQADADWSEKVDQ
LAAMLNS
>gi|319763389|ref|YP_004127326.1| redox-active disulfide protein 2 [Alicycliphilus denitrificans BC]
MLTIKILGSGCANCKKLEAVAREAATQANVEADFIKVTDMKEIMAYDVMSTPALVINEKVVSSGRIPATA
DVLKWVTPA
>gi|319763390|ref|YP_004127327.1| permease [Alicycliphilus denitrificans BC]
MDWMLKLLNGGAGSLASYLAAHVLLCLLPAFFIAGAMAALIPKASITRWLGRNTPAYVSYPAAAVAGSLI
AVCSCTIVPLFAGIYRKGAGIGPAITFLFFAPAGNIMALAYTGSILGAEFAVARLVLCLLFGIGIGLLMS
LIFWRDDATHDAETDDAFADKAQIAPAALGVLLSLVALLIAGTLKLWPLTTTVGTVTLPLGWAQAWQDTL
FSWVPFDAAKGEEGVSFQGSVLIALLLTIAATAWKGLDNITDGANRWTWVALGLAATTLLVAAARLTPVA
GGLEFALTGRVLGVGLTLWAVWHYARQLPADDWQAWLWEAWRFVKQIFVVLVVGVFIVGMVRQVIRPEWI
EAVAGSNTVLANAVAVGFGVFMYFPTLVEVPVARMFLDLGMHPGPLLAYLMADPELSLQSMLMVAAVIGR
TKTAGYVSLVALFSTCAGFIYGSWMDGAVLQAVMMALGLFSFVVAASYFWSRARGAITPQA
>gi|319763391|ref|YP_004127328.1| hypothetical protein Alide_2709 [Alicycliphilus denitrificans BC]
MKKFVVFYSWQSDLPTTRNFIQKALSLAANTIMAEMPGVSIAIDQATRGLTGSPNIPLAIMKKIKEADMV
VSDVTPINADLQQKKTPNPNVLFELGFAVAAQGWDRVALVFDAGVGKFPDDVPFDFDKHRAIPFPNSADN
QVNDLKALAGTLKNAIKSTLEANPARPTATLTPEEVRHQRDVKTLTEIFEKLDIQVIDDHFSKMPHCISD
AALHMWDMFSIVSGGNDFHLHDAELFDLIHQFRAAFGLTLAFDGMYHEAPGGLQHIFTGHDILGTTAQKK
AWDQIDEASKEMNTVFREILRLIRTQYLEVDLKTTSKVAWQDYVEYRKSLKE
>gi|319763392|ref|YP_004127329.1| hypothetical protein Alide_2710 [Alicycliphilus denitrificans BC]
MASGGNDEKTGALASNDIPTIVAHAFAKTVEKILSDWHFPEAGDVHFDSKSRDLVIAGKSRSAFGKGLRA
ITHAAFTLGLLAFCRSRHTPHTGFVVLDSPLLAYREPDGVDDDLRGTDLQEQFYSYLEGMSSDTQVIVVE
NTNPPSSIMEREQSLMFSKNPHQGRYGLFPYAPDRAREPDGTSA
>gi|319763393|ref|YP_004127330.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MKAYIDRHRDDYGVEPICRALQMAPSCYWRHAARQRNAQLRSARAQRDEGLKADIQRVWHANWQVYGADK
VWLQMNREGIVVARCTVERLMRAMGLQGARRGRAVRTTTPDTSAPCPLDHVNRHFHASRPNELWVSDFTY
VSTWQGWLYVAFVVDVYARRIVGWRVSRSMQTDFVLDALEQALYDRQPAAHALTHHSDRGSQYVSIRYTE
RLDQAGIQPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGI
PPAEAEANYWRQLAASDTSTKVST
>gi|319763394|ref|YP_004127331.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319763395|ref|YP_004127332.1| DNA topoisomerase iii [Alicycliphilus denitrificans BC]
MRVFLCEKPSQGKDIARVLGAGQRSNGCYSGAGVVVTWCIGHLVEAVPPEGYGEQYKRWAIEQLPIVPER
WRVEPKVATAAQFKVVQQLVAKAGELVIATDADREGEMIAREIIDLCGYRGPIQRLWLSALNDASIRKAL
GALKPSAETLPLYFSALARSRADWLIGMNLSRLFTLLGRQAGYTGVLSVGRVQTPTLKLVVDRDREIARF
VSVPYWAADVLLSHAGQSFTASWIPPEGSTDAAGRCLQQPVAQQAVDRIRAARDAQVVSVDTERVREAPP
LPFDLGTLQEVCSRQLGLDVQETLDIAQALYETHKATTYPRSDSGYLPESMLAEVPAVLDALLATEPSLR
PLLGQLDRNQRSRAWNDGKVTAHHGIIPTLEPAKLLAMSEKELAVYQLIRGRYLAQFLPHHEFDRTVTQL
ACGGQSLVAVGKQIAVIGWRQVLATPEPDAADGEEAQRSQVLPPLASGSRCGVEQVELKALRTLPPKPYT
QGELVKVMKGVAKLVDDPRLKQKLKETTGIGTEATRASTIKGLLDRGYLLKKGRAIRASDAAFTLIDAVP
AAIADPGMTAIWEQALDMIEAGQMTLDTFIAKQSTWVAQLVQQHRGATLSIALPPSPPCPQCGAPMRQRT
GKSGAFWSCSRYPDCKGTLPVESSASKRGAPRKRRTVPKAS
>gi|319763396|ref|YP_004127333.1| single-strand binding protein/primosomal replication protein n [Alicycliphilus denitrificans BC]
MSTHFVGEGNIGSAPDYREFPNGNDEPRRLLRLNVYFDNPIPKKDGEFEDRGGFWAPVELWHRDADHWKD
LYQKGMRVLVEGRTVRDEWEDADENERVTFKVEARRVGILPYRIESVTLSAKPAGGQ
>gi|319763397|ref|YP_004127334.1| hypothetical protein Alide_2716 [Alicycliphilus denitrificans BC]
MTASSTGQPARFLPLEQADFQRLEHAGYLKGLLQPFKGNGSLDIWASQCTALRDDLIGLAQRRVLQQARA
YPFSLLDVQLAQQTTGTGTTFLRWRNHDRSAMGVALWETLLDRPATPASLIDDLYAMELQRIALNMQISL
LHTLGRQAQECASKAAQAEAAFLRRVHGHAASVSPTTKESP
>gi|319763398|ref|YP_004127335.1| hypothetical protein Alide_2717 [Alicycliphilus denitrificans BC]
MSNEPQQPLQLNLGSLRSAMSLTLHTHHASRIWHGRAPAEGRPGIIGLNGYISVMNKMKRGAEQDDPYSD
WWMLRIEDKLTQTKAGLQALREQVDQALADVPPALSLGENMNVQPVKLPLFVNAQLGFMAVYLLADYDDL
ARKLILAHHTALIDRSTLERWLNDGAHALRSLFSLAQQYRYSGATRDDFASKNAVARAALEKFGELPQDV
LEGTRRSRFAPPIARRAGKPGAAADVAPVAGAADVVQDHKDSDQDGEGAKA
>gi|319763399|ref|YP_004127336.1| hypothetical protein Alide_2718 [Alicycliphilus denitrificans BC]
MATGGAPRRDGPVALSALFDGALRQLLPSAQPAGYGTATAQAAAPASDGFLYSGNRHESVPRALFLDRRL
TPLERNAWQVFRLQLNDDGVTAFPTYDQLRPYLTSMPCAAQASHETVARALTLLRLTRWLSLVRRRRDPK
TGRILGNLYVLHDEPLTPFEAMQLDPDYLGLVSQALTHAAKAVQIVGMNTLREIAEDPMLNGRTLPTRLQ
VLAQRMARHGWAEGSYPQEAVDHDSEEGQDGLLRNVDRPSSESEAGSKPAPDGSLRNPKEDRTVRMDRIN
QIRTVPRAKALQHLRLPERLLRLKDEQQSGALVALQQVDESLRQAVLDEWDARCRNSAVRNPAGYLFGII
QKAIRGEFKAWAGEGGSSSTPPPPHAPPRPAEPPPPAPNGPGREAARAYLAKLRSTLGDS
>gi|319763400|ref|YP_004127337.1| hypothetical protein Alide_2719 [Alicycliphilus denitrificans BC]
MSAPHPLNQAVIAQALHDLRNGQLRRCKAMGFGEEELDALKHPELVSMLVNATVSWCSVSVNRDVLKRLL
SQVHDVKREIATVDRMLRLGASTEMVSRFYGLTHQEVALRRDILGLPKRKGRHPVLDEEQDTALWRHWQA
GIAERSIALDDEVAMLTLTMDLAETLSLPMSVIWAAIRNWIDQGLV
>gi|319763401|ref|YP_004127338.1| hypothetical protein Alide_2720 [Alicycliphilus denitrificans BC]
MADLTPQDMAAKLLASGFERNCPSVAALSDPIADTPMVVTLDQLRPYDHDPRVTRNPAYEDIKASIRERG
LDAPPAITRRPGEPHYIIRNGGNTRLAILRELWSETKDEQFFRIPCLFRPWPQRGEVVMLTGHLAENELR
GGLSFIERALGVEKAREFYEQESGQALSQSELARRLTADGFPLPQSHISRMQDAVHYLLPAIPTLLYGGL
GRHQVERLAVLRKACERTWERRALGCNLSVDFATLFQDVLSQFDTQPDNFSPQRVQDELVGQMAELLGVD
YDTLSLEIDDSESRQRALTSDPAPLQAARPAVPAGSSAEPPRPPSPPSPPTGPSVQSSEPGAGQAAQADS
TPAASDKGMQQDDGLRDERLQGHIVSPAPTTERLQSIQRMVADQMGDKLPDFEVDALRAIPVQAGGLYPI
SDVWYIEPGLDVPDRLRVHIAQFAREIAEEADVAGQVEPSEGGIGFVCVAPPAVRALPPFARAVLTLLHA
LCAAPQPATGLDGARLADDLAALLHGGGTYPRLSDAGLVKLFRLLRLARRLLNLETGAASSNPGHGA
>gi|319763402|ref|YP_004127339.1| hypothetical protein Alide_2721 [Alicycliphilus denitrificans BC]
MASAHELARGHKRLRTLIEFALGEGWKVVRTRGGHLLFTKPGCAPIYTSSTASDHRAEGNARAQLRRADR
QAAQGVAASQENGRG
>gi|319763403|ref|YP_004127340.1| cobyrinic acid ac-diamide synthase [Alicycliphilus denitrificans BC]
MQVVSIISTKGGVGKTTTAANLGGFAADAGLRVLLLDLDVQPTLSSYFTLAARAPAGIYEMLAYNEQRAE
QLVSHTVIERLDLVLSNDDRGELNTLLLHAPDGRLRLRHLLPTLAPRYDLMLIDTQGARSVLLEMAVLAS
DLALSPVTPEILAARELRRGTLQLIEDIAPYRHLGIEPPPLHLLINRVHPVSSNARLIQRALRQVFQGQS
GVRVLDTDVPAIEAYPRAATRGLPVHRVEYRQPAGRAAPAALDTMRALASELFPAWQERFALVNGRGDAG
GAGHGQRA
>gi|319763404|ref|YP_004127341.1| prophage cp4-57 regulatory [Alicycliphilus denitrificans BC]
MSSQITAPALPPEHRILRRTEVEVKTGFKRAHIYSLMKEGKFPKALRLGVRAVGWDSVEIEQWIADRLNE
RA
>gi|319763405|ref|YP_004127342.1| hypothetical protein Alide_2724 [Alicycliphilus denitrificans BC]
MQKSSCLSFGAKTYYRPIEAAIRWAGLLRFELRILETLGPRAIPETSDFPRWPVLRLFAERIFDALAHDE
LRFGKAGIAQESQRPALDDPDLIVRHVDLKAWMSYYYPGERPPFLFDEIERELHPAVNLATLNVLLADRE
ATKVQLAELTQLHAASHAQHEALVKEYAIRTAEGDGAREPGLRSESTYLNIIGGLLNLLLGKSPAGTSYS
SFDNVGAVVSALLAHHEGRPGISERTLWSKLAQARRHLEASR
>gi|319763406|ref|YP_004127343.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MDLRHIRAFVAVAEELHFGRAAKRLHIEQSPLSRTIRALETDLGVVLLRRTARGASLTWAGQIFLQDARR
IMLAVEQTEARARAAAEGCQDTLRIALAGDIGRSRLSTLLALCRQEAPQVNIRLSEMPIAQLVHGLNSDL
FDAGFAMIDDVGAGIIATPVWVDPLMVALSARHPLLVFKEVPLEEVVRYPLVLCDPQSCKGCRQQRERLF
RSFEVRPMVDEYITTHGLMLTLVAAGYGVGFSSAAHFAGCQQADVVARPLVDRTASLTTYLLRPERGMGK
ALRQFIEHAKRVGLPSGA
>gi|319763407|ref|YP_004127344.1| heavy metal efflux pump, czca family [Alicycliphilus denitrificans BC]
MIAKLIRWSVANRFLVLLATAMLTAWGVWGVRSTPVDALPDLSDVQVIIRTSYPGQAPQIVENQVTYPLA
TTMLSVPGAKTVRGFSFFGDSFVYVLFEDGTDLYWARSRVLEYLNQVQGRLPATAKPALGPDATGVGWIF
QYALVDRTGKNDLAQLRALQDWFLKFELKSLPNVAEVASVGGMVKQYQVVIDPIKLASHGLSQGQVRDAL
VNANQETGGSVLELSGAEYMVRASGYLKSLEDFRAVPLVARGGVPVRLGDVATLQVGPEMRRGIAELDGE
GEVAGGIVILRSGKNAQQTIAAVKAKLAELQASLPQGVEIVTTYDRSALIERAIRNLATKLGEEFLVVAL
VCLLFLWHLRSALVAIIALPLGVMTAFLVMHYQGINANIMSLGGIAIAVGAMVDAAVVMIENAHKKLEAW
QHAHPDQRLQGEERWEVITQAAEEVGPALFFSLLIITLSFIPVFTLEAQEGRLFGPLAFTKTYAMAAAAG
LSVTLIPVLMGYWIRGRIPDEQKNPITRMLIAVYRPSLEWVLRWPKATLLIAVLALATTAWPLARLGGEF
LPRLDEGDLLYMPSALPGLSAQRAAELLQISNRMIKTVPEVERVFGKAGRAETATDPAPLEMFETTVKLK
PREQWRPGMTPEKIVEELDRAVKIPGLSNIWIPPIRNRIDMLATGIKSPIGVKVTGNDLHMIDRIAAEVE
HVAKGIPGVSSSLAERLTGGRYVDVQIDRVAAGRYGLNVADVQAVVAGAVGGENVSETIEGLARFPINLR
YPREWRDSPQRLAQLPISTPVGQQITLGTVARIAITDGPPMLKSENARPSGWVYVDVRGRDLASVANELR
DAIGRQVKLEPGVSIAYSGQFEYMERANARLKVVVPATLLTIFVLLYLTFSRLDEAGLIMATLPFALTGG
IWFLYLMNYNLSIATGVGFIALAGVAAEFGVVMLIYLKHALDERCPDGRRPTQEELLEAIREGAVLRVRP
KAMTVAVILAGLVPIVWGSGTGSEVMSRIAAPMLGGMVTAPLLSLFVIPAAYVLMRKPR
>gi|319763408|ref|YP_004127345.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus denitrificans BC]
MNNSLKKSLAGLTLIAIGVAAGWGLAQWRTDTTHAGNTTVPQAGAAAERKVLYWYDPMSPTQKFDKPGKS
PFMDMDLVPKYADEDAQGSTGISISPQTVQALGLRTAVVVQRAIGADVDVVGNVLLNDRDVSIVQARSAG
FVERVYARAPGDVIGAGAPLADLLLPEWVAAQREFLAVRALKDGSLTTAARQRLLLLGMPQTLVAQVERT
GEPRGIYTVTTPQGGLVAELMVRQGMTVSAGASLARVNGLGTVWIEAAVPEAQSGPLQLGQEAQVRLAAF
PGEVLRARIVSILPQANSDTRTVRVRLELANPGQRLKAGMSGQITLKGREQPALLVPSEAVIRTGKRALA
YVVDGPGKFHPVEVQLGAEIGDQLVVQGGLEAGQQVVASAQFLIDSEASLRGLLPASPGATPEHGAHGAA
PAYTVRGVVEEVSTAELTLAHDAIPALKWPAMTMGFKLADPRLAAGLAPKQQVRFTFSKQGEDYVITAIE
RAKP
>gi|319763409|ref|YP_004127346.1| czcc family heavy metal rnd efflux outer membrane protein [Alicycliphilus denitrificans BC]
MLISSSGAPGERRPAPGRGVVRATSCRTWTHRLSVLSIALAGSMLAASGAYALSFVEAREIAEQQSPRVS
AQRLQIDAVESAQKAAGTLPDPKLSIGLESFPISGMDRWSLTRESMTGQRLALMQEVPNQAKRAAKVASA
QARVERERAALVLQRLQIRQELGLAWIAAQAVEQRDQLLAELLAENRRLQDSLLARVAGGSAQAGDLLTA
QQEALALSDRRDDLQRDRSKARAMLRRWVGPRADESLQGGTGPLIHPVAQLRAELSSHAELALYPTMQSM
ARAESHEAQSESRGDWSWEVAYTRRDRRWGDMVSFQLTFDLPWQKERRQTPMIQAKQRELERLEAEQEDV
TRKHLQELDDSAAELQALDSQIERLQSTGLQLAQGRAELALSNYRSAKGDLSAVLGARAQVLEARLRLID
LQAQRDGVTTRLNSLIAD
>gi|319763410|ref|YP_004127347.1| hypothetical protein Alide_2729 [Alicycliphilus denitrificans BC]
MKALPSRDGSLIRGKLSHIQHSEHPTMVSIRRIVTQWGRRIVGGLIVALLFSQMALAMYACPKLDADTHA
ASMQMAGMAMDEATGMSAMPDCHAMPGTMDDESPQLCRAHCSGDGKPAPSPQGLDGLSTAAAHAVWIAYL
LPVVPDPQSSTDARADPAWLDHRTGSFPFHLTFQVLRN
>gi|319763411|ref|YP_004127348.1| hypothetical protein Alide_2730 [Alicycliphilus denitrificans BC]
MNGMYMNDMGWWLGAHWLTMLLGAVVIVLPFWKIFAKAGFSGWLGLLMIVPMVNLIALYVLAFSDWPRLR
RADKLDSGEMNPGIR
>gi|319763412|ref|YP_004127349.1| heavy metal translocating p-type atpase [Alicycliphilus denitrificans BC]
MSNHIHQHGKGDSAALGGAHSDMFYVCPMHSEVRQKQPGRCPKCQMHLVPEGEAAHGHYHHGHAAGEQTP
AASAAAPMEVPAGTIYTCPMHPEVQQDHPGNCPKCGMSLEPVIPLDEEDNSELIDFQRRFWWTLPLTVVV
TILAMFGHRLGWFDMKTQTWVELVLSLPVVLWTGWPFFVRCWQSIVNRSPNMWTLIGLGTGAAFVYSVVA
TLAPGVFPDSFIAHGRVAVYFEAAVVIISLTMLGQIIELKARSQTSAAIKALLGLAPKTARRINADGSEE
DVPLNHVHVGDLLRVRPGEKVPVDGVVTEGSSAVDESMLTGEPVPVTKRAGDGLIGATMNTSGALVMRSE
KVGAATMLSQIVQMVANAQRSKAPMQRMADVVAGKFVVVVVLIAIATFFVWGFFGPEPSWVFGLINAVAV
LIIACPCALGLATPMSVMVATGRAATQGILFRDAGAIEKMREVDTLIVDKTGTLTEGKPAFDTAVADPGY
TPDEVLRLAASLDQGSEHPLADAIVRAARDKGLSLTKADDFESGSGIGVRGTVEGKHLVLGNTALMQQEN
VATDALKADAERLRSEGGSVMHLAVDGRLAGILAVTDPIKATTADAIKTLHDSGLRIVMATGDGLTTARA
VGAKLRIDEVHGEVKPADKLALVERLQKEGHVVAMAGDGINDAPALAKADVGIAMGTGTDVAMNSGQITL
VKGDLRGIAAARDISIDTVRNMRQNLLFAFVYNGIGVPIAAGVLYPITGWLLSPLIAALAMSLSSASVIF
NALRLRRARG
>gi|319763413|ref|YP_004127350.1| hypothetical protein Alide_2732 [Alicycliphilus denitrificans BC]
MNHHLHHHGHAAGEQTPATQALSALDFFDYQRDFLERTVLFWDTLRQRANNMLEHERAGLPPLLDFKHET
LLDARRFERPVNYALLRITEIDEHCWDDCVDPDKPPVIVVDPRAGHGPGIGGFKRDSEVGMAMREGHPVY
FVIFFPEPTLGQTLADVLHVLRSFVEEVALRHPGKPPVLYGNCQAGWAVTLLSADCAGLAGPVVLNGSPL
SYWAGESGVNPMRLSGGLLGGSWLAHLTADLGNGRFDGAWLAQNFENLKPEKAVWEKYAQLFTNVDSEQE
RFLEFERWWNGFYFLSREEILAIVENLFIGNQIEQGLFRICQGCTADLRRITNPIVIFASYGDNITPPHQ
ALGWIPAVYSDTENLRQAGQRIVYLTNPHVGHLGIFVSARVARLEHRAILESLADIEALAPGLYEMKIDN
PSGDPDCHKPSYSIRFEPRQVQDLKTDYPQEAFERVKQVSTVNEALYRAFVSPWAQALATPWTAEMLKWL
HPMRTSRYLLSEAFSPWMRGVALLAESLSKNRQPLAQNHPFIKREREAVGEVTHAMGQLREGRDAAREQA
FRLMFQNPDLFSSVLSMMGKKVGDGNLGRPNSVSVLDVKDDQVVKTVPVGKTPNGISVTP
>gi|319763414|ref|YP_004127351.1| cytochrome c class i [Alicycliphilus denitrificans BC]
MTLKPLALWAAGLLALLLVAGAGYFSLRVSNRQAAAPVHSLRPDDPQVLRVGARIYAQQCAACHGARSEG
QPSWRDRGPDGLLPAPPHDASGHTWHHPDEQLFAITKQGLAQLINQPDYRTAMPIYGGVLSDDEIVAVLS
WIKAQWPPEIRRRHDEINIQYRQSLSR
>gi|319763415|ref|YP_004127352.1| isoprenylcysteine carboxyl methyltransferase [Alicycliphilus denitrificans BC]
MEHTGSSYGLWPLVVVNVAIFVMFAFSFFKPASARDWRSFGAFTAFIVALFVEMYGFPLTIYFLSGWLGQ
KLPGVDLLNHNAGHLLELLFGWGGDPHLGPFHILSYLFIGGGFWLLAAAWPVLYEAQRQGRLARTGVYAR
VRHPQYIAFVLIMFGFLLQWPTLLTLLMFPVLVVMYARLAHNEEQESARRFGQAWQEYALHVPRFIPRWG
AWAQP
>gi|319763416|ref|YP_004127353.1| hypothetical protein Alide_2735 [Alicycliphilus denitrificans BC]
MTHDHASHPQSVQTGGFWRSRYAIGLLVFGAVAGYFLWTEHRAHLAQWWPYAFLLACPLIHVFMHKGHSS
HGGHGGGSGATGQGTGQNSGRG
>gi|319763417|ref|YP_004127354.1| hypothetical protein Alide_2736 [Alicycliphilus denitrificans BC]
MIHIRHSLIGLCVAAASVGVLAQGSDEHKDHHPGETTAPAAATPAPAAAPPSQAMSPDMMAAMEQRMRAV
HEKMVAAKTPQERQALMAEHMKTMQDGMRMMESMHGQMASGNPPAGMAGMQHDPQMMERRMDMMESMMQM
MMDRMSMPQTSTPGTK
>gi|319763418|ref|YP_004127355.1| hypothetical protein Alide_2737 [Alicycliphilus denitrificans BC]
MTTIQRLLTISALAMGVALPMAGHAQVSPSPGQVAAPASDSITNGEVKKVDPDNGKVTLKHGDIKNLDMP
GMTMVFTVRDKGQLTKLKPGDKVQFTVVQEGGKMVVTDIQPAR
>gi|319763419|ref|YP_004127356.1| blue (type 1) copper domain protein [Alicycliphilus denitrificans BC]
MNKSIVISLFAAAAFPLAALAAGTHAGGHDMPASHGNMSMSEHSAMFGQPGDPAKVTRTIDVVMNDNMRF
DPSSINVKEGETVRFMVRNAGKIRHEMVLGSLDELKEHAKEMRANPGMVHSEPNQVNLKPGQRGTMVWQF
TQPGKVDFACTEPGHLEAGMAGQVEVAR
>gi|319763420|ref|YP_004127357.1| copper resistance b precursor [Alicycliphilus denitrificans BC]
MPGMDHGTAPSQGTASGPAPAMEYGAAPASDGSMAGMGHGAMQMQGGSPPADARDPNGYSDGFERGSGKY
SFTGVPRLQLGDQMSFANLRVNRLERAWARHGDNATTYDLQARIGRDFNHLVIKAEGDVAQGKLQDSRTE
LLWGHAIAAFWDSQLGVRFDHSTGKDRQWLAAGVQGLAPYWFELDATAYLGSGGRTALRLEGSYDWLLTQ
KLILQPRTEWNFYGKSDPVNAIGSGLANASAGLRLRYEITRQIAPYIGVEWQHSFGRTGDFVRASGGSAT
QTRWLAGLSFWF
>gi|319763421|ref|YP_004127358.1| copper-resistance protein, copa family [Alicycliphilus denitrificans BC]
MRFKTPSFSASPGQAIQRRRFLRALAAGTALGTLDAALPAWALQDLPAARTGTPPELRGPVFDLTLAETR
VDFDGRTGIATTINGSLPGPTLRMREGETVTIRVTNRLRETASIHWHGIILPFQMDGVPGVSFAGIAPGE
TFTYRYTLEQSGTYWYHSHSGMQEVTGLYGALIVEPRDRETIRADREHVVLLSDWTGTDPMRALAKLKAQ
GDVFNQHRPTFVKFLRDVRANGMDVALQERDMWYAMRMSPSDMADLSSTVLSYLVNGSAPGANWTALFKP
GERVRLRCINGSGNTFYDVRIPGLKLTVVQADGQDVEPVTVDEFRFGPGETYDVIVQPRDDAYTLFAQSM
DRTGYARATLAVRPGLSAPVPALDAVQWLTMADMMGGMAQGGGYDMAAMGHGSMVGMNHAGMASMQGMGG
GHDMSAMGSMPGMAHSMASNPLQKPGTTVRHARTEWGPGADMRVDMPRTNLDDPGVGLRDNGRRVLTLAD
LKTVGGSLYAGGPEREIELHLTGNMERYTWSFDGLDFTDSRPVHFRYGERLRVILHNDTMMTHPMHLHGM
WQELENASGEFVARLHTIPVQPAQRVSFLVSADALGRWVWHCHLMFHMEMGMFREVVVA
>gi|319763422|ref|YP_004127359.1| heavy metal response regulator [Alicycliphilus denitrificans BC]
MKILIVEDEPKTGEYLRQGLSEAGYVADLVPNGTDGLHMALHGAYDLVILDVMLPGLNGWQVLQSLRERG
LQMPVLFLTARDQVEDRVKGLELGADDYLVKPFSFAELLARVRIILRRGPAGNEGTMLRVADLELDLLRR
RVSRNGRRVDLTAKEFGLLELLMRRHGEVLPRSLIASQVWDMNFDSDTNVIEVAMRRLRMKIDEGHAVKL
IQTVRGMGYVLDVPQEE
>gi|319763423|ref|YP_004127360.1| heavy metal sensor kinase [Alicycliphilus denitrificans BC]
MALRIRWGRLPLTRRLTLLFTAVAASVVLGLGALFLVETERHFVELDRMALQDKQHLIEEILRNANSADD
AHRRLGEALSYHHDLYAQVQDGQGAVVFQSRGFIPTMRGDKPLSAGENKVFGVWRHDGARFHTLVFKAAP
AYSSTPLMVWIAADTDHHTQFLDRLRRSLALYVLAAIAICGLLSWFAARQGLAPLRDMKSRAAKVTGQKL
GERMPVQAVPVEMADLAQELNRMLDRLQEDFQRLTDFASDLAHELRTPISNLLTQTQVALATKRDAATYR
DILASNAEEFQRLARMVSDMLFLAKTERGVDLPHKERFSARQDALALLEFYEAVAEEKRIRLRVEGAGEI
EGDRLMFRRAVSNLLSNALRYTPEAGDITIRITGTAQATTVAVENTGADIDAKVLPRLFDRFYRADASRA
HPDTDGSGLGLAITRAIAEAHGGRVTASSGQGRTCFTLVFPHRVAKP
>gi|319763424|ref|YP_004127361.1| hypothetical protein Alide_2743 [Alicycliphilus denitrificans BC]
MTQQRLSLSSMIAAAAAVAALGLPGMASAAYEHPANNEIGVIVHPEHFKSEKTRAQVKAEAEAAMRQGRL
SYGESNYPIRTPDAGPGKTRVQVINELRSESPAERDARLRLYSAG
>gi|319763425|ref|YP_004127362.1| hypothetical protein Alide_2744 [Alicycliphilus denitrificans BC]
MPRMPVGSAGVNGSADGYRRAPNGALLVLMDQSSPGI
>gi|319763426|ref|YP_004127363.1| bilirubin oxidase [Alicycliphilus denitrificans BC]
MAIHEAITRRDFMNGVGMGTAALLAGVPQTQAAPGMQGASDAFEPDLALELIARPRNASLRPGRTTSVWS
YQSRMLKGDPTSVQALPDSYLGPILRLRRGQKVRIDFINRLDQPSTVHWHGLHVPDTMDGHPRFAIGPGE
RYRYEFEVRNRAGTYWYHPHPHGHTGEQVYFGLAGLLLVSDGEEQTLPLPRGQYDVPIVIQDRSFDDDNQ
FRYLGDTGPTARGNASGAPSAPGNAMGGRGMMGGMMSRGAMMSGGMGGMMARMMGFLGDTILVNGRPDAS
IEVATHPYRLRILNGSNSRIYKLAWQDGRPLTVIGTDGGLLERPVHKDYVMLAPAERVELWADFSKDDLG
TQLTLMSLAFEGSMGGMMGMMDGGPMAAMMDNSSLAAGAQFPIFKVNVARKTNARLELPERLSAVSWPRL
QDAVNRAKPRAFRITMAQMQWGFDGRGFEMMAVAPNEVVKLGTTEVWEFANDSGMMTMAHPIHVHDPQFQ
VLERRHGAASGGVRDGYVDQGWKDTVLVMPGDRVKLLMRFADYPGLYLYHCHMLEHEDLGLMRNYRIET
>gi|319763427|ref|YP_004127364.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MPKTRPPYPAAFRQQMIELVAAGNTPAQLARQFDCTAQTISNWVGHAAVDRGKPSTSKEGLTNAEREELH
RLRRQVRQLQTERDILAKATAWFAARGEKTFTPSSSS
>gi|319763428|ref|YP_004127365.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MAHQAAFAVHTMCRVLGVSVSGFYAWRDRAPSKHAMEDAVMVERIRAIHAASDATYGMPRVRAKLIDQGA
RVSRKRVARLMRLHGLRGMSRRRGFVVTTQREPKRRPAPDLVNRQFVADEPNRLWVADITFVPTWAGFVY
LAIVLDVWSRRVVGWSIGECIDTELVLAALNMAIAQCRPGNVIHHSDQGSQYTSISFGKRCGEMGVRPSM
GSVGDAYDNAMAESFFASLECELIDRRVFKTKTEARLALFTWIEGWYNPCRRHSALGQRSPATFERIHID
DIHIEAPSHEHGLPTVGVCVACATPPVDNPAS
>gi|319763429|ref|YP_004127366.1| hypothetical protein Alide_2748 [Alicycliphilus denitrificans BC]
MMSGMQMGAMTGMGGWFGAHGLILLLWAAVIILPFWKIFSKASFSGWLSLLLLVPVVNLIVLYVIAFARW
PARRFPDLPV
>gi|319763430|ref|YP_004127367.1| hypothetical protein Alide_2749 [Alicycliphilus denitrificans BC]
MNRLHFSPPVAAALAAALLFGASTPFAKQLLRDLSPVLLAGLLYLGSGIGLGLIRLARDRGWRKPVMPAR
EWLWLLLATGFGGVLAPLALMLGLMTTPAATASLLLNLEAVLTAVIAWVVFRENTDRHIVLGMLAIVAGA
VLLAWPDASPATGRLGSGTLLIAGACLGWALDNNFTRKVSATDALFVAGLKGGVAGIVNTGIALALGAAL
PAAPVLVEAMLVGLLGYGVSLVLFVLALRGLGTARTGAYFSTAPFLGAAIAVFALGEHAAPLFWLAAALM
ATGVWLHLTERHEHTHTHETMTHTHRHVHDVHHQHTHDFPWDGREPHSHEHAHAPITHCHPHYPDIHHRH
RHDRAA
>gi|319763431|ref|YP_004127368.1| heavy metal translocating p-type atpase [Alicycliphilus denitrificans BC]
MSISLHNRPHGQDGYTDQHHEDHDHDHDHHDHHDHHDHEYPFDWNEALRICLVAVAAVAVWFTWWEPYPA
VSVIGVIGLVIGGWPIFKEALEHLQARRMTMELSMTIAIVAAAAIGEFFTALVITLFVLIAEVLEGLTVG
RGRKAIRDLLEFLPREVSVRRAGSIKTVSAEELSVGDVILVSPGGGLPVDGVVVSGHSFTDESRITGESM
PVEKTEGSRVYAGAINQSGALEIRAERIGRDTSYGRIIEAVERAERSRAPVQRMADRLAGYLVYFALGAA
VLTWLITRDMRSTISVIIVAGACGIAAGTPLAILGGIGRSARLGAIIKGGVHLETLGKVDTVVLDKTGTL
TYGRPEVQAVLPAEGVSAAALLDAAATAEVRSEHPLGKAILSRVKTEARKVREPEHFGYTPGRGISARLG
DATILVGNRAWMADNRIDLPPLRDLGACTEVVIAKDGRLLGTIDIADTIRPEAKRAIAALDAMGVQTILL
TGDNRQVATAVATELGLKNVEAELLPEDKLARLADMVKKGRTVAMVGDGVNDAPALAEASVGVAMGSGTD
VAQESSDIVLLGNDLACFVETMKVARRTRAIIWQNFAGTIGIDLVGIALAAFGLLGPLLAAFIHVASELT
FILNSARLLPQARRTSFGSPGDASTAGLADVAPAGRH
>gi|319763432|ref|YP_004127369.1| hypothetical protein Alide_2751 [Alicycliphilus denitrificans BC]
MSHTVKEKPKLLARVRRIRGQLEGIERALEAEKGCADVLHQIAAARGALTGLMREVMEEHINSHIAHPQD
PGDGTREQGAAELIAILRSYMK
>gi|319763433|ref|YP_004127370.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MEFRLLRYFIVVAEELHLARAAERLGIEQSPVSRAMRDLERLLGVQLFDRSTRQTRLTWAGKVLLGEARC
VLAAVDHAVQATKGAAQGYQGVLRIGICDSLAQPRIASLLARSREEEPELNIRVFELPFAQQLKGLHNDL
LDIGFALSDGVNDGLVAELAWSDPLSVIVPARHPLLEHVQVKLRDALKFPLVLCHPDAGSGCHNQIQAVL
NGATIPPKVADHVTSLGVMLTLVGAGYGIGFAIASQVQTLNRPDIAVRPLAGTPPMLSTYLLRRRAEPSE
PTKRFLERAREEFGPKGDEPAS
>gi|319763434|ref|YP_004127371.1| helix-turn-helix domain protein [Alicycliphilus denitrificans BC]
MTAFSESFRSEVARIARKENKEEMASLRKAATNQRAEIAALKRDIKALAGQVRSLAKALERVQVEAERQR
PPQRSEGSPAQEQAPAKQGGRAFAFSHEALVAKRQAFHMTQKEMARLLHVSPLSVYKWETGRVTPREAQL
VRVREVLKMGLREARRQIAE
>gi|319763435|ref|YP_004127372.1| histone family protein DNA-binding protein [Alicycliphilus denitrificans BC]
MDRNPQTHTFDMNRAQLVEILASKNDLSKTAANAVLETLTETIQTAVKKGDTVQLVGFGTFKSAKRAART
GKNPATGAALKIPASTVPKFVPGAKFKAVVDPKAAKRKAGK
>gi|319763436|ref|YP_004127373.1| transcriptional regulatory protein qseb [Alicycliphilus denitrificans BC]
MRILLIEDDSSLGSSLQSWLQMDGYAVDWLRRGDQAAAALATHAY
>gi|319763437|ref|YP_004127374.1| hypothetical protein Alide_2756 [Alicycliphilus denitrificans BC]
MEERLELLKEMAENLAWPALGLLEPQAEPLARETVDLEVDRVILLL
>gi|319763438|ref|YP_004127375.1| hypothetical protein Alide_2757 [Alicycliphilus denitrificans BC]
MNTEEIRAVLTICLLAAYADGDKHDREREQIRQVAQGLAQDQQVNLPGLYQEVLMRRIQLADVVPRLSSS
EARQLAYEMAVCVCEADGQTSAAEQAFLARLREALGQAPAEFAAQADALATAPLGAPSAALPEAAAAGQA
APHPAAVDALPGTAAQRRPGTLPAAEMDRKILNAAMLNGAIELLPENLSTLAIIPLQMRLVYQIGQSYGY
ELDSGHIKDLLATLGVGLTSQYLEQAGRKLLGGLLGKVGGGLLGGLGRQAVSSGMSFAATYALGHVANQY
YAGGRTLGTQMLRDAYQHVMADGRQLQAQYLPQMQEMARGLNTARIVQMVRGG
>gi|319763439|ref|YP_004127376.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MTGSIQCALPWFHHSRTVQKIPPTDDLRVFCTVVRKAGFAAAAQELAASPAYVSKRIRLLEQELGVPLLH
RTTRRVAVTDQGERVFHWAQRILDDMDQLLQEVAVTRREPRGLLRVSSSFGFGRNVVAPMLSRLVQRHPG
LQVRLEVFDRLVDVAGEGFDLDVRVGDEIAPHLIARRLADNHRVLCAAPGYLARRGTPRSPAELPAHDCL
VIKERDHPFGVWRLRAGAVEQSVKVTGPLSANNGEMVVQWAVDGCGIALRSLWDVGAHLEAGRLVQVLPE
WRQEANIWAVYPTPLERSAKVRVCVEFLQEYFGRQRPW
>gi|319763440|ref|YP_004127377.1| tartrate dehydrogenase [Alicycliphilus denitrificans BC]
MQQRTYKIAVLPGDGIGKEVMPEGLRAVQAAAQRFGLALDIHHFEWASCDYYAQHGQMMPDDWKAQLQDM
DAIFFGAVGWPATVPDHVSLWGSLLKFRREFDQYINLRPVRLFEGVPCPLAGRKPGDIDYYVVRENTEGE
YTSLGGIMYEGTDREIVIQESVYSRKGAERLLKFAFDLAQSRPRKHVTLATKSNGIAISMPWWDQRAEEV
ARQYPGVTLDKQHIDILTARFVLQPGRFDVVAATNLFGDILSDLGPATTGTIGLAPSANLNPERGFPSLF
EPVHGSAPDIYGKNIANPIAMIWSGALMLDFLAQGQGAGRQAHDAIVAAIEEVIRSGPRTPDLGGQASTQ
QVGEAIAALIAKG
>gi|319763441|ref|YP_004127378.1| patatin [Alicycliphilus denitrificans BC]
MRMAVLWRPLAYLGLAGLAACGSAPPGKSAAPAQAAAEPVRIGVALGGGAAKGFAHIGVIKMLEANGLAP
AVVAGTSAGSVVGALYASGMDAFELQEKAVALDETRIRDLQLSSGGLVQGQKLEDYVNEQVRRKPLEQLA
KPFVAVATRLEDGERTVFARGNTGQAVRASSSIPGVFQPVAIGKYHYVDGGIVSPVPVDAARQLGADVVI
AVDISNKARGKAPEHLLGALGQSIAIMGQKLGQAELARADVVIRPKVLDIGPADFSQRASAIVEGEKAAL
AAMAQIRERIAQVQAERAQATRLAQQKALDAQREACLSNRSRLRKLAGMAGLDDSCAAP
>gi|319763442|ref|YP_004127379.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MKLPATKGPAMAQIDRVLRSNLKLRHLQMLVALDQFRHLGRAAEFLSVTQPAVSKTLAEIESMFGLPLFE
RSTRGTEPTAAGASVVRFARSVLAGYDRTRDEIAAEASGASGRTSVGAMVSATPVLLAQAVQRLKARSHR
TTVLIEEGDLARLLPKLRLGELDLFVGRLEPGYASPDLETEPLYDDPMVAVARPGHALARRRAVQWADLA
GQPCVMPPPWASLRVKLEQQFFAHGLHPPADIVESASFLSQITFLHQRGAVAFMARTVARHFAQQGMLAV
LRLPVQVALPPVGLITLRGQRVTPVTGLLVESLREVGKTA
>gi|319763443|ref|YP_004127380.1| hypothetical protein Alide_2762 [Alicycliphilus denitrificans BC]
MQTPRSERRQFIFGALGAAALATGSTRLFAQEWPARPITFICPWPAAGTADQSMRALCTVAARVLGQAIA
VENRAGASGMIGAKALASAKADGYTIGQIPISVTRFSQIGTLAADPRKDFTYIARTSGQTFGIAVPASSP
YKTLQELVAAAKARPGQVTYAHAGVGGATHVGMEEFAMAAGVQFNHVPYKGGAEALQGVLGGHVDALADS
SSWAPHVEAGKLRLLATWGEQRTPRFKDVPTLKELGYNVVVDAPNGIGAPKGMDPAILARLRDAFRQAVA
SPEFKAVTDRIDAPVMYLDGPDYEKYVNAVYQKETVLIDKLKLRELMKS
>gi|319763444|ref|YP_004127381.1| galactarate dehydratase [Alicycliphilus denitrificans BC]
MTMGPLLHLHPNDNVFVAKTALALGQEIPELGVRTRAQVPAGHKIAARRIAEGEQVKKYDTVIGVATRNL
EPGDYVHSHNLKIVDYYRDPAFGADVRPVQYVPEDRRATFKGFVRADGRVGTRNFIGILSSVNCSATAIR
HIAAHFTPERLAAYPHVDGVVAFAQTSGCGMSSPSEHFDVLRRTLAGYARHPNLAGALIVGLGCERNQVD
ALVQSQGLQPGQLLRTFVMQDMGGTRATIAAGIAAIEEMLPIANQARRQTVSASHLKIGLECGGSDGFSG
ITANPALGAAMDILVRHGGTAILSETPEIHGVEFMLTRRAVSPAVGQKLLDRLAWWEKYAAGQNAQFNGV
VGHGNQAGGLANIFEKSLGSAMKGGTTPLQAVYEYAEPITQNGFVFMDSPGYDPVAATGQIASGANMICF
TTGRGSMFGSKPAPTVKLATNTPMYLRLQEDMDINCGLIVDGECTVPEMGERIFAQILRHASGEPTKSEL
LGLGDNEFVPWHLGIVS
>gi|319763445|ref|YP_004127382.1| succinic semialdehyde dehydrogenase [Alicycliphilus denitrificans BC]
MPLTLSRPDLIRSANFIAGAWTSTPAARLAVTDPATGAAITDVPDSGAAEARAALDAAHAAFPAWRKVPA
KQRAAIIKLWHDLVMAHQDDLGKLISREQGKPLAEGKGEVAYAASYIEWFGEEATRMNGEVIPAPVPGRR
MFALREPVGVVAAITPWNFPAAMIARKIAPALAAGCTVVCKPAEDTPLTSLALVLLAHEAGVPPGVLNIV
TASREKTPEVVDVWLDDARVRKITFTGSTPVGKHLARRSADTLKKLSLELGGNAPFIVFDDADVDAAVEG
FMAAKFRNGGQTCVCPNRVFVHRAVFDSFAQKLAARVGALKVGPASDPASQIGPMINGRAVEKIERHVQD
AIAKGARVLTGGKRLPELGPTYYAPTVLTGADPTMACACEETFGPVAPLTVFDDEAEVIQAANDTPFGLA
AYFYSQDVRRIWRVADALESGIVGINEGAISAEAAPFGGVKESGYGREGSTHGLDDYLHTKYVCQGQLD
>gi|319763446|ref|YP_004127383.1| 4-hydroxy-2-oxovalerate aldolase [Alicycliphilus denitrificans BC]
MPAHNPFKTALANGQAQIGLWLSMADPYLAEAAATTGYDWLLIDGEHAPNDLRGTLAALQTMAPYPGQPV
VRVVEGSTALIKQMLDIGAKSLLVPMVDTASQARAIVAATQYPPRGVRGVGSAVGRASQWSSRADYLDVA
DDEVCLLVQAETATALRNLEAICAVDGVHGVFIGPADLAASMGHRGNPGHPEVQAAIEGAMRTIVASGKA
AGTLTSDPALARRYLDLGCTFVAVGVDVLLFTQAARKRRAELGGQPVANAAPPSAAY
>gi|319763447|ref|YP_004127384.1| hypothetical protein Alide_2766 [Alicycliphilus denitrificans BC]
MTAIQPPGLPFSQACENNQAPILAVLAQAFADRRHVLEIGSGTGQHGVYFAPRLPHLVWQTSDLAENHAG
IRAWHARHPAPNLRPPLLLDLQGSDWPPGAFDAVFTSNTTHIVAWPLVQRLFALSGAHLPPGGVLAVYGP
FNYGGGFTSDSNRAFDAWLRARDPASGIRHFEDIAALAARHGLALERDHAMPANNRLLVLRRGGAQA
>gi|319763448|ref|YP_004127385.1| glutamate racemase [Alicycliphilus denitrificans BC]
MTEPLAARPIGVFDSGIGGLSVLQALRHELPHEDFVYLADSGNAPYGDAKGEAFVQQRTLAIARWLRAQH
GIKALVVACNTATAAAVERLRATLPDLPAIGVEPALKPAAARSQTHHVGVLATRGTVSSARFARLHDEHG
ARTRFAVQACDGLARAIEQSTEEPLPATESATKIRALCARYTGALGRFGLKTGDIDTLVLGCTHYVFAKD
ALRDLVGPDVQILDTGAAVARQTRRILAQAGALAHERPGAPPGGIRLYTTGQLGALQAAAGRWLQLPAQC
CAALPDV
>gi|319763449|ref|YP_004127386.1| n-formylglutamate amidohydrolase [Alicycliphilus denitrificans BC]
MPDTIHPLFTFHQGTAPLLISMPHVGTYLPPAIAARLTPEARQVPDTDWHLERLYGFARELGASILVPTH
SRYVVDLNRPPDGASLYPGQSVTGLCPVDTFDDTPLYADPADAPGEAEVAARRTAYWEPYHAQLRAGLER
MRAEHGVAVLWDAHSIRSVLPRFFEGRLTDLNLGTGKGTSCDPALAEELLGIAKAATGYTAVLNGRFTGG
YITRHYGEPARNIHAVQLEMTQCSYMQEALPFDYLPEVAARVQPHLRRMVEAALAFALSRRGG
>gi|319763450|ref|YP_004127387.1| formiminoglutamate deiminase [Alicycliphilus denitrificans BC]
MDKTHTSARPEVPHLPARDAGALFAEHALLPGGWARDVLLRWDAGGRLVCAAPGSDAGDAPRAPGPVVPG
MPNLHSHAFQRAFAGLTEYRAQAQDSFWSWRDLMYRFAARISPESLQAIATWLYVEMLEAGYTSVCEFHY
VHHDQGGRPYADDATLSLALLRAARAAGIGITLLPVLYQASGFGGRPPRADQARFIRSTDNMLSLLERLA
PATRAQEAVLGLAPHSLRAVPPDSLRAAVQGLTALDARAPIHIHVAEQRQEVDDCVAWSGQRPVQWLLDH
ASVDARWCLVHATHMTPEEYAAAARTGAVAGICPTTEANLGDGIFDMPLWLQHGGRWGVGSDSHACVNAA
EELLMLEYSQRLSLRQRNVLAGSGQPQVGTALWLAAVQGGAQAAGRAVAGIVEGQQADFAVLDPRHVALA
GLPAEAMLSAHVFASSRGTALHGVWTGGVQRVAAGRHALHERAAQEFVAARAAIIAA
>gi|319763451|ref|YP_004127388.1| imidazolonepropionase [Alicycliphilus denitrificans BC]
MSIHPCADGVWEGLRLAPGLARADVAVGAGERASLVVQGGVLRWVGPSAALPAGYARLARRDGGGLLATP
GLVDCHTHLVYGGQRANEFAMRLAGASYEEVARAGGGIVSSVRATREASEDELFALALPRLSALLAEGVC
AIEIKSGYGLTLEHERKQLRVARRLGQALGVTVRTTFLGAHALPPEYAGRSQDYTDAVCDEMLPALAAEG
LVDAVDAFCERIAFTLAETRQVFQAAQRLGIPVKLHAGQLSDMGGAQLAARHGALSCDHIEHLSQEGIDA
MKAAGTVAVLLPGAYYTLRDTHLPPIAQLRAAGVPMAVSTDHNPGTSPALSLLLMANMACTLFRLTVPEA
LAGITTHAARALGLSDTHGLIAAGRPANFVLWSVGEAAELAYWLGHNPARTIVRQGRIVKGA
>gi|319763452|ref|YP_004127389.1| hypothetical protein Alide_2771 [Alicycliphilus denitrificans BC]
MQRFDLAAVPPTPWKNGGGHTRELACWPPGAGMDGFEWRVSVATIAAPGPFSAFAGVDRQIMLLDGDGVH
LSAPGVGLDHRLDRRWRPFAFPGDVAVGCRLLGGSSTDFNLMLRRGRWRGSVEVARDARVPGSTPAGLCM
VLAGRWSLGGDMLEPGQGLWWSAAGAGSALAPHARQGGEAPVLAWVALMPWIQEKNASSA
>gi|319763453|ref|YP_004127390.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MTMQAGSQGAEPIVRIRGLRKAYGDHVVLSGIDFDVQPSQVVVVIGPSGSGKSTFLRCCNGLEQPQGGRI
DICGRTLVDDGRMLPDGDLNALREEVGMVFQSFNLFPHLSVIDNVTLGPRKLHKLPRAEAEAEARVLLEK
VGLAHKAEAMPASLSGGQKQRVAIARALAMKPRVMLFDEPTSALDPELVGEVLQVMKVLAREGMTMMVVT
HEMDFAREVGDVVVVMDGGGIIESGPPATIFTNPAQERTRSFLQAVLTRA
>gi|319763454|ref|YP_004127391.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC]
MELDFSPVWAGWLQLLQGAVVTVQVTAASLLLGCVMGLLVGIGRLNPRNRIVYGLCTAYVAAIRGTPLLV
QLFLLFFGLPQLGVLLPAFVCGVIGLGIYSGAYVSEIVRGAIQSIDKGQMEAARSIGLSSGQAMRSVVLP
QAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLAIAVVYFVLTGATTLVLRH
MELRLRAGGMVQ
>gi|319763455|ref|YP_004127392.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC]
MTTIRRNLLLAGMAALALGAAGAHAQDNVLRVGTDATFPPMEFVENGKRTGFDIELVEAIAKAMGKQVEW
VDIDFKGLIPGLISRRFDMAVSAIYITDERRKVVDFTEPYYAGGLVAMVKESNTSIRKLSDLDGKRVSVQ
VGTKSVGFLTQNYPKVQRIEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTRPGLRVLEEQLTTEEYGM
ALRKDTPELTKAVNAALARLKADGTYAAIVKKWFSAGAAAK
>gi|319763456|ref|YP_004127393.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MATACFDTAAMSKSASSAAVPTADRVLQVLAVLARQGKTLSAAELMEHTGLARSTLYRQLARLKRWGFVL
ESDGHYAPGPLSLQLALGFDLASHLVRLARPGMLELAQQSQESVGLIVAVNDQAICLDMVESQQSLRCSF
EKGRSVPLRAGASAKCVLAHLPEAARAAVLDSLWGPGTPARQAAQDELDAIRQAGFAVSAGAVDPGVWGC
SVPLFGASRQAVGAITLMAPILRSQGHEEALIRMTVVAAARISRQLVLH
>gi|319763457|ref|YP_004127394.1| urocanate hydratase [Alicycliphilus denitrificans BC]
MNANDAILNAARQDPRHDASRVIRAPRGSELACKNWLAEAAYRMLQNNLDPDVAENPKALVVYGGIGRAA
RNWECFDEILAQLKKLEADESLLIQSGKPVGVFKTHPDAPRVLLANSNLVPKWANWEHFNELDQKGLFMY
GQMTAGSWIYIGSQGIVQGTFETFIEAGRQHYNNDLTGKWILTAGLGGMGGAQPLAATLAGACSLTIECK
QSSIDFRLRTRYVDKQARDIDDALALIEYHTGKGEAVSIALLGNAAEVLPELVKRAKAGGPRPDIVTDQT
SAHDLVNGYLPTGWTVEQWNAAAADPGQHPTLRKAAAQSCAVHVQAMLDFQAMGIPTVDYGNNIRQVAFD
EGVQRAFDFPGFVPAYIRPLFCEGKGPFRWVALSGDPEDIYKTDAKIKELFPENRHTHRWLDMARERISF
QGLPARICWLGLGERHKAALAFNEMVKSGELKAPIVIGRDHLDCGSVASPNRETEAMKDGTDAVSDWPLL
NALLNTAGGATWVSLHHGGGVGMGYSQHAGVVIVADGTDAAAQRLSRVLWNDPATGVMRHADAGYESAVA
CAKRNGLNLPMVR
>gi|319763458|ref|YP_004127395.1| permease for cytosine/purines uracil thiamine allantoin [Alicycliphilus denitrificans BC]
MSSEASTPVSTGPIERRTIDMVPEDERHGSPSSQFTLWFGANMQITAVVDGALAVVFGAEAMAAIVGLLI
GNILGGIVMALHSAQGPRLGLPQMISSRVQFGVKGAALPLLLVILMYLGFAATGTVLSGQAINLMFGFSA
PAAGIAIFGALTALVAVVGYRLIHTVGRISTVVGILGFGYLAWQLFHQYDVASAFGQKPFTWASFLTAMA
LSAGWQMTFAPYVADYSRYLPSKTSTAATFWTTFGGSVISAQLAMSFGALVAALGANFIKNQVGFLGELA
GPLAVVIYLVIVTGKLTVNCLNAYGGVMTMLTTVSAFNDRKQFSPATRLAYILGFVLVTVLVALLASSNF
LSTFKNFVLLLLTVFVPWSAVNLVDYYLISKEKVDIPALYDSRGRYGAYNGVALFSYILGIVVQIPFINQ
AMYEGPLAKAMGGADISWIVSLVVTALVYYPLAARTMDVPRQMIYPAAEPAAGAHDTLPGYDGSLAHTSH
AG
>gi|319763459|ref|YP_004127396.1| histidine utilization repressor [Alicycliphilus denitrificans BC]
MHRPIRASSPAAVPTFQRIKDYVLQQIQSGTWQEGDAIPSEAALAKQFEVARMTVNRALRELSDERTLTR
VRGSGTFVAQQKYQSTLVQLRNIADEIAARGHVHRGELQKLERCRADAALARQFELSAAQTLFHSVVVHF
ENDVPIQVEDRYVNPAVAPDYLAQDFGSQTPNAYLMRVAPLQGVQFSIEAGMPGADVADMLRMDAGEPCL
VLRRSTRSQGQVASVSALWHPASRYRFTGSF
>gi|319763460|ref|YP_004127397.1| histidine ammonia-lyase [Alicycliphilus denitrificans BC]
MNPANPSAPDVLVLRPGHVSLAELRRIQAGGVHLRLDPAAQAGMLAAQATVQRIVDEDQVVYGINTGFGK
LASTRIAHDHLADLQRNLVLSHSVGTGEPLPDPVVRMVLATKAVSLARGHSGVRPALADALLALANADVL
PVIPAKGSVGASGDLAPLAHLACVLIGEGQARVQGRVVPGREAMAAVGLDPFVLGPKEGLALLNGTQVST
ALALAGLFDAESVFAAGLVSGALTLEAIKGSVKPFDARIHEARGQAGQIAVAAAVRALLEGSAIDPSHPH
CGRVQDPYSIRCVPQVMGACLDNLQHAARVLRIEANAASDNPLVFTDTAEVISGGNFHAEPVAFAADIVA
LALAEIGAIAERRLALLLDPGLSGLPAFLVRESGVNSGFMIAQVTAAALAAENQCLAHPSSVTSLPTSAN
QEDHVSMATYGARRLADMVRNTAVIVGIEAMAAAQGIDFDRVPAPGAAPPAPWLKSSPPIEAQLAAIRAR
VAFLERDRYLAPDIEAMRLWALRTCWPETLRRILPSSAG
>gi|319763461|ref|YP_004127398.1| histidine utilization repressor [Alicycliphilus denitrificans BC]
MAPASPARAKERNAPRLAEASPVALYQQVKDHVARRIQDGSWKAGDRLPSENELVLQFGISRMTVNRALR
ELAEQGRIVRVAGVGSFVAEGKPQSTLLQIANLASEIRQRGHDYRCKVLGVERVAASMEVAAALDLHTGE
PVFHALCVHLENGVPVQLEDRYVNPRVVPDFIDQDFAQLQPSEFLVRNVPYDQMEHVVDAVLPTPQQARL
LEMEPTQPCLLLMRRTWNRGTPVTLVRCLHPASRYRLGCRIRADGNPVFG
>gi|319763462|ref|YP_004127399.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MNPLLSIQAVSRTFVSPKGQATQALLPVDFDVQENDFVTILGPSGCGKSTMLRIVAGLDHPTSGRVLLGG
QPVEGPGADRGMVFQSYTLFPWLTIEQNIRFGLRERGMPEGAQKERAAYFIAKVGLRGFEQHFPKQLSGG
MQQRTAIARALANDPKILLMDEPFGALDNQTRVLMQELLLGIWEAERKTVMFVTHDIDEAIFMANRVAVF
SARPGRIKSEIAVHLPHPRHYRVKTSPEFMELKARLTEEIRAESMAAEAH
>gi|319763463|ref|YP_004127400.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MNQAMSAAPALGRQERRPRRRGLAPLEPVSARTRVALGVGFFVLFFVVWAFFTLGGFVSPTFLASPITMA
REGWLLFTEFGFLHDIGMTVWRVLGGFVMAAVVAVPLGIAMGAHKGVEAFLEPFVSFCRYLPASAFIPLL
ILWAGLGELQKLLVIFIGSVFQIILMVAVTVGNARKDLVEAAYTLGASSSGIVRRVLIPGAAPDIAETLR
LVLGWAWTYVIVAELIGSASGIGHMITDSQALLNTGQIIFGIIVIGLIGLVSDVLFKAVNRRLFAWSAL
>gi|319763464|ref|YP_004127401.1| substrate-binding region of abc-type glycine betaine transport system [Alicycliphilus denitrificans BC]
MSRTVVKMAPLAAAVACVAGLAAPAHAQETKVALGMSGWTGFAPLTLADKAGIFKKNGLDVELKMIPQKD
RHLALASKAIQCAATTVETHVAWNTNGVPIVQIFQMDKSYGADGLAVRNDVKGFADLKGKTVGVSAPGTA
PHFGLAWMLSKNGMSLKDVKIVSLEPQPAAQAFISEQNDAAMTYEPYLSSVRANPQAGKILATTLDYPMV
MDTVGCDPAWLKANPKAAQAMANSYFQALEMIKADPAKSYEIMGSAVKQTGEAFGKSASYLRWQDKAANQ
KFFAGELQQFMKDAAAILLESGVIRKLPDSYDAMYDASFIK
>gi|319763465|ref|YP_004127402.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MNTLNRLGVTADDRAVADAVARFATGTLAPRAREIDEHGLSVTCHVPQLAELGVMGMNLPEHLGGAGVTP
TAMLLSLVEISRACAATSSMIGAHYLGTDAVLIGGSPGQHARWLPRAASGEWLAGFALTEPRGGSHPADL
RTRATREGEGAHYRIDGVKHFISNAKEARFLVVFAKTDPDAGARGVSAFVVETDSPGISISSPERLMGIQ
GAHAFEVAFDSVRVPAANRLGAEGTGFKTAMKVLDNSRLDVAATALGIAEAALADATRWMKERQIGGEPI
AGKQGLQWMLADMKLRLEASWGLTLQALALRQAGQPFTLQSAMAKLHASEMAGFVADAALQIHGGYGYTR
EMPLERYVRDARILRIYEGSSEVQRNIIARTVLAD
>gi|319763466|ref|YP_004127403.1| formyl-CoA transferase [Alicycliphilus denitrificans BC]
MPVPPPTIRPLDGIRILDFSRVLAGPLSTALLADLGAEVIKVEPPGGDDYRHIGPMRGGISSLFTALNRN
KKSMVLDLKHPEAAGIVAQLAQEVDVVVENFRPGVAERLGVGPGLLCRANPRLVYVSVSGFGQTGPLAHL
PAYDIIVQAMSGLMEATGEPDGPPTLVGEAVSDVIAGLFASWATLAALLQQRRTGQGQHVDVAMFDATLA
FLVTGVGRYLFTGESARRNGNRHSFSAPFGVYRARDGHFALAVLNNRLFASLAALIGAPGFAQDARFATD
ELRRAHEPELAAAIEAWAGRLGVAEVVAQLEAAGVPGSPLWTMAQALESEQGLARGLLRAVDDPRLPGLR
VPTQPVKFGGAAPNRAEPAPDLGQHTDELMAGLLQAGGERLAALRAAGLFGPA
>gi|319763467|ref|YP_004127404.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MINISLRQLEYFAAAAQHGGAARAAAALSVSQPSISKAIADLEALWGEALFVRRHARGLELTAAGQMRHR
EAHALLERARALEGPRTGEEAGLLRVGCLSTLAPRHLPAMLVRMRERHPQVEVEVHEGDTEALLQMLERG
ALDAALLYDMGLARPVRLEAVTAFVPYALLPAGHALAARTSLPVTALAQEPFILIDLPHSREYFLSLFRQ
AGAAPRIAHATPSIEMVRSLVANGLGVSLLTTRPVRDWSYDGKRLACRRLRGPLAAQSVVMAYPERLGAH
NPRAPLFARVVRECFTRQRDAMTAPDAP
>gi|319763468|ref|YP_004127405.1| hypothetical protein Alide_2787 [Alicycliphilus denitrificans BC]
MTTITRKRFTALALAALAPLALSTAWAQGPYPSKPVTFVVPAAAGGTTDIAARMAAQALSPVLGQSVVVD
NKAGGNGTIAAAIVKRAEPDGYTLLMQYSGYHVISPHLTRAPQWEQKDFQPIANVLSAPQIIVVREGLPV
KTLAELVAYAKANPGKLNYASSGNGSLQHVTGAMLEQQGGIKMVHVPYKGTGPALQDLLGGQVDLTFGTA
PPFMPHIQSGKLRVLAVTGKERLPSLPDAPTTAEAGYPGVNATSWFALFAPAAVPKPIIDKLAADMKKVV
EDPAFRKKAQEQGATADYQGPQQLGARVKADFAAWADVIKSSKIDPE
>gi|319763469|ref|YP_004127406.1| hypothetical protein Alide_2788 [Alicycliphilus denitrificans BC]
MPFTHAVTRRHAALALAAVLCAAPLAAAAQDKYPSKPITLVVPQAAGGANDAIARVLAQRLTEQMGQSVI
VDNRPGAGGTLATATLARAKHDGYTLLVTADSAHVIGPALYKNPGFDAVKDFEPVAPIATAGYVLVAHPS
FPANNVADLIRLAKASPGKYAIASAGNGTLNHLIGELLQKAAGIQLQHIPYKGSAAAATDVAGGQVPLSV
QSLPSSISFIKAGKLKVLGVVNEKRVAALPDVPTIGETLKGFGQAPWYAMFAPAGTPAPIVERLQAEVAR
ALDHKDVADKLAVVGCEPFKGTSAQLGVLVRADLPKWARVVKDTGATVD
>gi|319763470|ref|YP_004127407.1| pyruvate carboxyltransferase [Alicycliphilus denitrificans BC]
MNTVWNGAGRRIEICDVGMRDGLQMEAQFVPTEDKIALVDALSAAGLAKIEVTSFTSPTAIPALRDAEVV
MREIARRPGVTYTALVPNARGAERAIESRTDELNLVMSVSETHNLANLRMTRAQSFAALAHVVTMAQAAR
VPVNVSLSCVFGCPMEGDVALDGVWDWVQRFAGLGVAGITLCDTTGMAYPSQVAQVVAQARARWPGLAFT
LHFHNTRGMGLANVLAAIDAGADRFDASLGGLGGCPYAPGATGNVCTEEIVHALALMGYDTGVDLPALMA
AAARLPTLIGHEVPSQIARAGRRLDLHPVPPGFDAIRERALAR
>gi|319763471|ref|YP_004127408.1| formyl-CoA transferase [Alicycliphilus denitrificans BC]
MQETTTPAALAGVRVIEMGQLIAGPFCGKTLGEFGAEVIKIEAVGAGDPLRNWRLIKNGTSVWWQVQSRN
KKSVALDLRQAEAQDIVRRLIAEADVLIENFRPGTLEGWGMSPEELHALNPGLVILRISGYGQTGPYRDL
PGFGVIGEAMGGLRHLTAEPGRVPVRVGVSIGDTLAALHGAIGVMMALYHRKVNGGAGQVIDVALHEAVF
NCMESLIPEYSAFGVVREAAGSALPGIAPSNAYPCQDGWVLVAGNGDSIFKRLMAAVGRQDLADDPQLAD
NAGRVARVAEIDAAIGAWTATLTVAQVMERLAAARVPAGKVYTARDIAEDPHYQARDMLLTQQTRDGDEV
TVPGICPKLSATPGTIRSSAPRLGDDTDAVLAEAGLTQEQIALLRGKGVIQ
>gi|319763472|ref|YP_004127409.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MKLDPVSLRLFVAVMEENAIARAAAREHIAPSAASRRLAELEDQLRVELFTRSNRGTEPTAAAYALLNLA
RGVLNDLDGIATQMRDYRAGVRGHVRVVANISAITQFLPGELQRFMAAHPQVGVRLQEQISSAVAQSVAE
NAADVGILNHGSYGERVALLPYREDELVLIVPAGHALARRRRVRLADALPCDFVGMHPGSAINNLLTRAA
AELEMPLRLRMQVTSYDALCLMVSAGLGVAVLPRGSAQNLRGTLAIRAITLAEPWARRRLSLCVRAQEPL
SGVARLLVDHLRAQGTEAGA
>gi|319763473|ref|YP_004127410.1| uncharacterized conserved protein ucp015557 [Alicycliphilus denitrificans BC]
MNTSLRWDIFCQVIDNYGDIGVCWRLAAELGARGHRVRLWVDDATALSWMAPRGAAGVQVLPWPGKAPPD
GTGDVVVEAFGCEIAPDFIAAIARHTGDGGKKPLWINLEYLSAESYVERCHRLPSPLMKGPGAGLTRWFF
YPGFTERTGGLLRERDLAARQAAFDHQAWRARHGIAPHDLAISLFCYEPPALAQLLAQLGPRPGAHLLVT
PGRATAAVLHEIGLKPVWMDRQQLSFSYLEPCPQPAFDEMLWACDLNLVRGEDSLVRALWAGQPFVWHIY
PQHDGAHHAKLLAFLDWLQAPASLRRFHALWNGLDSAPALPLLDAATLAEWRACTAAARARLLAQPDLLT
LLLGFVAEKR
>gi|319763474|ref|YP_004127411.1| translation elongation factor p [Alicycliphilus denitrificans BC]
MKIAQEIRAGNVIMQGKDPMIVLKTEYARGGRGAATVRMKLKALLSNMGTEVVFKADDKIDNVILDKKEC
TYSYFADPMYVWMDSEYNQYEVEAGNMGDAISYLEDGMAAEVVFYDGKAISVELPTSVEREITWTEPAVK
GDTSGKVLKPAKIATGFEVAVPLFVGQGDRIEIDTRTGEYRKRV
>gi|319763475|ref|YP_004127412.1| hypothetical protein Alide_2794 [Alicycliphilus denitrificans BC]
MIFVKTQAGQKALKERHGALSPRQRSAFILFDGRRTLAQVLAATAALGITQDDVQFMIDEGLLEYASAAP
QAREPEAPAQADEGSAHSASERYQAAYLIATELTASLGLRGFRLNLAVEGTTGFDSLAALAPKIRDAVGE
AKYERLERALFA
>gi|319763476|ref|YP_004127413.1| sodium symporter protein [Alicycliphilus denitrificans BC]
MTERGAGRSYMARLNRIVALYIAGLLGFLALMAWAEQNGLSRQWIGPIFLFLTVMAYAAIGVYGRTTDPD
EYYVAGRRIPPIYNGMAAAADWMSAASFISLSGALYLQGFSGTPDQPGGLAYLLGWTGGFVLVAMLVAPH
LRAMNLYTIPDFFQVRFGGRWPRIIAALAAVLCSFTYVVAQIYGVGLIASRLTGVQFEIGIMLGLGGVLL
CSFLGGMRAITWTQVAQYMVILLAFLIPVSWLAYKQLGNPAAPVAVGLQIGKIAQLEDGLLASEVEHQVV
AAYLQRARDYEARLADVPAALAREHEAARQRIQRLRGQNADVGLIVAASRELASMPRDEAAARERWTREM
HANYERARALGGLPRHSQAFAGDPQGTPAEREAFDNSRRNFLALMFCLMVGTAGLPHLLTRYYTVPSVAG
ARTSVAWSLFFIALLYLSAPALAVLVKFEVMNNLVGSSFDQLPNWMAQWARVDASLLSVEDINGDGVVQF
GEIRFGADLIMLATPEIGGMPYVISGLVAAGGLAAALSTADGLLLTISNALVRDLYFQETRRRASPEQRV
ILTKFTLLTVALSAAFVAALKPSEILPMVSASFSIAASAFVPTMVLGIFWRGTTRRGAVAGMLAGLSVTM
YYLLAQVDGVRDLVPKLLLTDGLWFGIHPISAGVFGVPTGLAVAWLVSLATRPGRPRPVPADGL
>gi|319763477|ref|YP_004127414.1| solute symporter protein [Alicycliphilus denitrificans BC]
MPHRRTLTHDEHAGAPFAPDLHDARHLWLKAGLLLVWALVSFVACFFARDLQFAVGQWQLSYWIASQGAV
LMFIVIVCVYCAAMSHFERQDRAAQHKAAEAQAHD
>gi|319763478|ref|YP_004127415.1| phosphoenolpyruvate synthase [Alicycliphilus denitrificans BC]
MSARFEATALVVPFENLRMSDVEVVGGKNASLGEMISQLPQGVRVPTGFATTAHAFREFLGYEGLADRIS
ARLARLDAEDVRALAEAGAEIRGWVEAQPFPADLEKAVREAFARLSGGNEQASFAVRSSATAEDLPDASF
AGQQETFLNVVGIEDVLHKMKEVFASLYNDRAISYRVHKGFAHDVVALSAGVQRMVRSDLGAAGVMFTID
TESGFEDVVFITSSYGLGETVVQGAVNPDEFYVHKPMLKASKRAVIRRSLGSKLIQMVFASPEEKAATGK
LVKTIDVATEQRNRYSLTDAEVQQLAQYALVIEQHYGRPMDIEWGKDGQDGQLYILQARPETVKSQAKGQ
AEQRYKLKGHGQVLAEGRAIGQKIGTGPVRLIHDIREMDKVQPGDVLVTDMTDPNWEPVMKRASAIVTNR
GGRTCHAAIIARELGIPAVVGCGHATDLLKDGTLVTVSCAEGDTGKIYDGLLETEVTEVQRGEMPQIATK
IMMNVGNPQLAFDFAQLPNEGVGLARLEFIINNNIGVHPKAILDYPAVDADLKKAVESVARGHASPRAFY
VDKVAEGVATIAAAFWPKPVIVRLSDFKSNEYRKLIGGSRYEPEEENPMLGFRGAARYISEDFGEAFAME
CEALKRVRNDMGLTNVQVMVPFVRTLGQADRVTQLLAEHGLKRGENDLKLIMMCEVPSNAVLADEFLQFF
DGFSVGSNDLTQLTLGLDRDSGLELLAKDFDERDPAVRALLKRAIEACKRQGKYVGICGQGPSDHPDFAL
WLAGEGITSISLNPDSVIDTWQKLAG
>gi|319763479|ref|YP_004127416.1| hypothetical protein Alide_2798 [Alicycliphilus denitrificans BC]
MLPMHTRTVFYISDGTGITAETFGNAILAQFDMRPRHVRLPFVDTVDKAHQAVRQVNHTAELEGKKPIVF
TTLVNMDVLKVIQEGCKGMLMDMFSTFVRPLEQELGIKSLHRVGRFSDITRSKEYLDRIEAINFSLDHDD
GQSHRDLEGADVILIGVSRSGKTPTSLYLAMQCGLKVANYPLIPEDFERRQLPPALIPYRKKIFGLTIQP
ERLSEIRNERRPNSRYADLANCRYEVNEAEAMMRRAGIRWLSTTTKSIEEIATTILQEVRPERLVY
>gi|319763480|ref|YP_004127417.1| heavy metal efflux pump, czca family [Alicycliphilus denitrificans BC]
MFKWLLENSLANRLLVLATAAVLMAYGAFTLSRTPVDVFPDLNKPTVTLMAEAGGMAAQEVEQLITFVLE
TSMNGLPGVESVRSTSSAGLSFVYVTFDWSVDIFRARQMVAERLAAMEEALPPGITPTMGPVSSIMGEIM
QVAIPIDPARTTSMAVREYADWVLRPRLLAIPGVAQVIPIGGEVRQFQVQPDTARMAQLGITHEQLTAAL
KGFSANTSGGFLELNGREYLIRHLGQTTRLQDLQNLALAAPNGQSLLLRQVAEVSFAAATKRGDAGFEGG
PAVILGIQKQPTADTIALTGRIEAALAGLEKSLPEGMQAPRVTFRQASFIEASVHTLQGKLIGASVFVAV
ILFVFLGTLRPTVIALTAIPVSILVSALVFRYFGLSINTMTLGGLAIAIGGLVDDAVVDVENVLRRLKMD
RQKKPGMRLHPIEVVKLASMEVRTGIVYATAIIVLVFLPLFALPGIEGRLFVPLGVAFIVSTLASLLVSV
TVTPVLAFYLLPRMKNLDHGDTRLLAWLKARYRSGLQAVLNRPRQAVAAGALAVLAAAAAVPLFPTTFLP
PFNEGTLLIGMRLNPGVTLAESTALASQAERLVREVPEVTRVGRRSGRAELDEHAEGVHVSELDVGLLPA
SEMRRSMGEVQADIRARLAPLPVAISMGQPISHRIDHMLSGVRSQIAIKLFGEDLDTLRGQAESLRTRLS
GIAGLADLEVEKQVLAPQITVRVDYAAAAQYGVSAAQVLATLQGLVEGEKIAQIVEGGRRFALVVRLPDS
ARAPGGLAQLLLDTPRGRVPLSRLASIEEGDGPNQISRDDGRRRIVLSANAQGRPLSDVVADIRAVVDGT
RLPEGYFITLGGQFQAQEEASRLVAMLAVVSLALMFVVLYARYQSARLSALIMANIPLALVGAVLGLWIS
GQPLSVAALIGFITLAGISVRNGILKVSHYLNLMRTEGEGFDHAMILRGSLERLSPVLMTALVTAFALAP
LLFEAERPGTEILHPVAVVIFSGLVSSTLLDTFLTPALFWLLGRRDAERLLDDKRTEAF
>gi|319763481|ref|YP_004127418.1| hypothetical protein Alide_2800 [Alicycliphilus denitrificans BC]
MSRRPYMRAVACLLATALALPLAAPAHEGHDEAAPAAVGESPRRQPDGSVFVPKSVQRQMNLRALAAAAG
EYPQAFELAGTVAMDPNAGGKVQAALAGRLQAGPQGLPVPGQSVKKGQVLAYVVPTAGAIERSNQLAQQA
ELRAAQALAQRRVARLRELADTVARKDIEAAESELHSLTQRLAAVGAGLAQRDALVAPVSGVIASSNAVA
GQVVDARELIFEVVDPARLRIEALAYEPAQAQDIASAHLALDGQAVPLRFVGAARSLREQALPLFFAGDA
QALGSLALGQPVRLVVQTRSRVAGVRVPMAALQRNPSNQSIVWVKTAAEQFVPRVVGYLPLDGVSVAVIQ
GLAAGERVATQGAALINQVR
>gi|319763482|ref|YP_004127419.1| hypothetical protein Alide_2801 [Alicycliphilus denitrificans BC]
MHHSRTLPAALALLLGLAMPAARAHGGHDDGPAAPPAGAAPRFAAVSDRFELVGVIDGRRLTLYLDHAGD
NSPVQDARLELDLGGQVVAVARVGEGLYQAELAQPLADGEIPVTATVVAGADSDRLAADIDWHASAEAPD
KGGWTRAALLAAAAGLAGVALGLWAWLRSRRSAAARTGGAA
>gi|319763483|ref|YP_004127420.1| outer membrane efflux protein [Alicycliphilus denitrificans BC]
MPFVWKISRARLRALALTLAWGLAAASAAAQATPAVSPLQALFERAWRSQPEAQALPLRRQAAQAGRDSA
DAWMPEPAALELQTKNDRIGSRLGAREHTVGVALPLWLPGERARKAALGDAELQAVDSSGLAARLELAAR
VRESWWNWRRACSDRALAQGQLENARALAADVARRLAAGDMARSDHYQAQAVQAQAEATLAQAQGACDAA
RAALVVWSDGQPLPPENEALGAEPAPVLQQPQAAAYGHPALADGERQAALARRQAELAAVQTRANPELTL
SASSERGMAGDRYQQSVTLGVRLPLGAGVRAQAREAAALAQALELETRVERERARLAAGIRAAQAQASAA
AAQEQAMARNAELAGATRGFVAKAFALGEADWPTRLRAEQDAVQAERQALRARIDAAAAVSALRQALGLL
PQ
>gi|319763484|ref|YP_004127421.1| hypothetical protein Alide_2803 [Alicycliphilus denitrificans BC]
MRHLLLILILACLPLQSIWAAAASYCGHETAPAAAHFGHHQHLVHDGHAAAASGGCAHGHDGTSVRTGGV
DMDCHVCHGVGSALYAEPAATALRLGAMRPAPFVLPLLRAPAPARPERPNWPGLA
>gi|319763485|ref|YP_004127422.1| catalase [Alicycliphilus denitrificans BC]
MTDKQKLTTAFGCPVVDNQNTMTAGPRGPVLLQDVWLLEKLAHFDREVIPERRMHAKGSGAYGTFTVTND
ITKYTKARIFSEVGKKTELFARFTTVAGERGAADAERDIRGFAVKFYTEQGNWDMVGNNTPVFFLRDPLK
FPDLNHAVKRDPRTNMRSAQNNWDFWTSLPEALHQVTIVMSERGIPASYRTMHGFGSHTFSFINAANERF
WVKFHFKCQQGIRNLTGAEAEALIGKDRESHQRDLYDAIEAGDFPRWKFMIQVMPEKDASRVPYNPFDLT
KVWPHGDYPLIEVGVMELNRNPENFFAEVEQAAFNPASVVPGIGFSPDKMLQARLFSYGDAQRYRLGVNH
YQIPVNAPRCPAHHYHRDGAMRVDGNFGSTRGYEPNSYGEWAEQPDFREPPLSVEGSADHWNHREDSDYY
SQPGALFRLMNPAQRQALFDNTAASIGGATREVQLRHIRNCLKADPAYGAGVAKALGIPESEYAG
>gi|319763486|ref|YP_004127423.1| alkyl hydroperoxide reductase, f subunit [Alicycliphilus denitrificans BC]
MLDDQLKSQLAAYLERVTQPFEMVASLDDGETSAQMRELLTTIQSLRSDKISLRTDGQDARKPSFTLQRV
GAGTSLRFAGLPLGHEFTSLVLALLWTGGHPPKVEQDLIEQVRSLDGDFNFEVYMSLTCHNCPDVVQALS
LMAVLNPKVKTTVIEGGAFQQEVTEREIMAVPMVYLNGQVFGAGRMELAEIVAKLDTGAARREAAKLSAK
EAFDVLIVGGGPAGAAAAVYAARKGIRTGVAAERFGGQVNDTLDIENYISIPRTEGPQFAAALQQHVNAY
DVDVMNLQRAKALRPASQSGGLIEVEMDNGAVLKSKTVILSTGARWRNMNVPGEEQYRTKGVAYCPHCDG
PLYKGKRVAVIGGGNSGVEAAIDLAGVVAHVTVFEFMPQLKADAVLQKKLASLPNVDVVLNAQTTEVLGD
GSKVNALAYKDRATGEEKRVELEGIFVQIGLLPNTDWLTGTVELSKFGEIVIDAKGQTSVPGVFAAGDCT
TVPYKQIVIAAGAGATAALSAFDHLIRTSVPQ
>gi|319763487|ref|YP_004127424.1| peroxiredoxin [Alicycliphilus denitrificans BC]
MSLINTQVQPFKTTAFVNRGGKGEFIEVTEQSLKGKWSVLIFMPAAFTFNCPTEIEDAAEHYAEFQKAGA
EVYIVTTDTHFSHKVWHETSAAVGKAKFPLVGDPTHQLTNAFGVHIPEEGLALRGTFVINPDGVIKTLEI
HSNEIARDVSETLRKLKAAQFTAAHPDQVCPAKWKEGAKTLTPSLDLVGKI
>gi|319763488|ref|YP_004127425.1| bacterioferritin [Alicycliphilus denitrificans BC]
MQGDAQVISHLQAQLKNELTAINQYFVHYRMLKHWGFDKLAKKEYEESIGEMKHADKLMDRIFMLDGLPN
LQDLGKLQIGEDVPEILECDLRAEHGAQATVKEGIAYCESVRDYVSRDLLQEILEDTEEHIDFLETQIEL
VNKVGLQNYLQSQMGNAD
>gi|319763489|ref|YP_004127426.1| flagellar transcriptional activator [Alicycliphilus denitrificans BC]
MTSEQLLAEIREANLTYLMLAQTLIRQDKAEAVFRLGLNEEAADILASLSAAQVLKLASRNTLLCSFRVD
DELVWSLLTNHNTPRKAASEATNTLHANILMASRVSEVL
>gi|319763490|ref|YP_004127427.1| flagellar transcriptional activator flhc [Alicycliphilus denitrificans BC]
MSAPAKSVLNESKQIERAAMLIEMGARMQVLESETTLSYERLIRLYKEIAGKSPSKGQLPFSTDWFLTWQ
ENIHSSLFLNIYEYLSKGVSLDSVELLTKAYRLYNEQVAAAQIEPLLSFTRAWRLVKFVDAGMLTRTKCS
QCGGQFVTELYENRHYTCGLCNPPARAGKSKSAGALTLH
>gi|319763491|ref|YP_004127428.1| phosphoenolpyruvate carboxylase [Alicycliphilus denitrificans BC]
MTAPARKTDAAASPARRTDKDLPLIQDIRLLGRILGDVIREQEGVAAYEVVEQVRKLSVAFRRDADHEAD
RMLKKLLKSLTGDQTVSVIRAFTYFSHLANLAEDRHHIRRRAVHERAGSSQEGSIEVALARLRWAGIAPR
TVAQTLATSYVAPVLTAHPTEVQRKSILDAEREIAQLLARRDDILARAQLYNSAKDTVSPRELAANEAQL
RARVAQLWQTRLLRYSKLTVADEIENALSYYESTFLQEIPRIYADLERELGGNQSVASFLRMGQWIGGDR
DGNPNVSAATLALALRRQSDVALRHYLTEVHHLGRELSLSANLVQVSPEMQELAVRSPDTSEHRQDEPYR
RVLAGVYARLAATLKDLSGGDAARHAVAPQNAYVSAEEFLADLRVIEASLQSHRGAALTAERLRPLIRAV
EVFGFHLATVDLRQSSDQHEHVVAELLATARVQADYAALPEPERRALLLRLLCDARPLRVVGAQYSELAM
NELAIFETARLMRERYGKDAIRHYIISHTETVSDLLEVLLLQKEVGLMRGTLDAGACADLIVVPLFETIE
DLRNAAPIMREFYAIPGIAQLVRASGAEQDIMLGYSDSNKDGGIFTSNWELYRAEIALVALFDELNAAKG
GAPIRLRMFHGRGGTVGRGGGPSYQAILAQPPGTVRGQIRLTEQGEVIASKYANPEIGRRNLETLVAATL
EATLLQPTKPATKAFLEAAEQLSRDSMAAYRALVYETPGFVDYFFGATPIREIAQLNIGSRPASRKPSQR
IEDLRAIPWGFSWGQCRLTLPGWFGFGAAVQAFVEAPGQDPKSRLALLQKMYRQWPFFRTLLSNMDMVLA
KSDLALASRYSELVADARLRKKVFSAIEQEWQRTSEALTRITGEKQRLAANTALARSMRHRFPYIDPLHH
LQVELVRRWRAGQGDERVQTGIHICINGIAAGLRNTG
>gi|319763492|ref|YP_004127429.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC]
MTTSSALPPIVIATRESQLALWQAEHVQALLAARGHSVSLLGMTTRGDQILDRTLSKVGGKGLFVKELEV
ALEEGRADIAVHSLKDVPMELPDGFALACVMEREDPRDAFVSPHHASLDELPQGAVVGTSSLRRQVLLQA
LRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERIRSVFEPGQMLPAAGQGALGIEIRSQ
RQDLRDALAPLAHERTWLTVTAERAVSRAMGGSCSMPLAAHGVWSGDTLRLQAAWGDVEGRLPLVRAEGS
SRVATLDEADALGLAVAGRLRAAGAVAAC
>gi|319763493|ref|YP_004127430.1| uroporphyrinogen-iii synthase [Alicycliphilus denitrificans BC]
MLSVAAPPRAIVTRPAREAAQWVTDLQAHGIAAAALPLIAIGAVADPALREALQRARARLGSYRAVMFVS
GNAVQYFFEENQAPGLSQKALAAINTRVWAPGPGTVAALRQTGLPASRIDAPGADAAQFDSEALWQVVAP
QISPGDRVLVVRGSSAPAAEGGNGREWLAGQIGAAGGAVDFVAAYERRAPRLDAAGQALARTAAGDGSLW
LLSSSEAVTHLAAALPGQDWSRARALATHPRIAQAARAAGFGTVLECRPSFAEVVASIESPHEQ
>gi|319763494|ref|YP_004127431.1| hypothetical protein Alide_2813 [Alicycliphilus denitrificans BC]
MSNESPPELTASAPPAPRTPTPSSGSGAALFTLSVISMAALVGSALLWQRLSSIQEQLARQTADSGAQAI
EARALAQQAQDLARDTSARLAVAEARVGEVALQRSQLEELMQSLSRSRDENLVVDIDAGLRLAQQQAQLT
GSLQPLVAALRSASQRIERAAQPRLAPVQRAMGQDLERLEHASVTDTAGLLGRLDDLVRQVDDLPLVSGV
AQAAAMRHQAGNGQPAAAAAAAASEPRWQAALRRTWEGVRDETRGLVRVSRIDHPDAMLLAPDQAFFLRE
NLKLKLLNARLALLARRMDSARTDLAAATAALNKYFDPASRRTQNAATALQQLQSHMKAAETPQLDDTFA
ALATAAAGR
>gi|319763495|ref|YP_004127432.1| hemy domain protein [Alicycliphilus denitrificans BC]
MRAALWFLALFGAAVALALFAGNNQGTVTVFWPPYRVDLSLNLVVVLLLGGFTLLYAALRGLSALLQLPL
QARRWRLQQKERAMHGALLDALSQMLAGRFLRARKAAESAIEQEKALEDARHGLPHGRQLRTLAHLVAAE
SSHALQDRGTRESHLQLALDSIPERGPASILELREGAQLRAARWSLDERDASTALERLSALPAGTARRTL
ALRARLKATRLSHMTEQALETARLLGKHRAFSPAAAESIVRGLAVELINGAHDPSQLQRIWLGLESAERG
MPEIAVQAAQRLSRLGGEAAQVRAWLLPVWERMVDPAQSALPDQQALKVVQALEASLEGLDALWLARIEA
AQQANPRDARLQYLSAVACMQRELWGKAQHLFTQAAQQLRDAPLRASAWRHLAELAGQRGDGAAAAHAWQ
QAALQRTAD
>gi|319763496|ref|YP_004127433.1| cytochrome-c oxidase [Alicycliphilus denitrificans BC]
MDSAILSLLGAFLLSIIGLFGFIWSLRKGLLVENPKAASAIFASGEIGHIDDPALGHAGQKRLQAAAAEP
GDSTHPPDAREIADRVAADRSSAFPVFMFIAFACMWLLFGGIAGLTASLKLHWPDWLVSEAWMTFGRIRT
VHLTAVLYGWITNAELGVIIWLMPRLLRTPLIGPMWIMLGGALVNVAIASGIGAIGAGWTDGMEYLEMPW
QIGIFFAAGMVCIIGPVLYTLVNRKSESLYVTTWYHTAGLLWITLLFIVGKMPGVHFGVQQAAMNWWYGH
NVLGLWFTPVAVGAIYYFLPKIIARPIRSYNLSILGFWTLAFFYAQVGGHHLVGGPVPGWLVTLSIVQSM
MMIIPVLAFSINMGLTMKGRMRLGVYSPTLRFMMFGGLMYLLSSLQGSFEALRSVQAVTHFTHFTVAHAH
LGAYGFVTMVLFGAIYFMMPRILHWEWPFPRLISWHFWLAAVGILIYFVGLSYGGWLQGLAMLDASRPFM
DSVAVTIPWLQWRSVGGALMVASHLVFVGHFLAMALRFGPDRAGAALFSTQPKARELAHGE
>gi|319763497|ref|YP_004127434.1| cytochrome c oxidase mono-heme subunit/fixo [Alicycliphilus denitrificans BC]
MENEVKLAAGTMVTFAIAVSALVILPYIQVRDVKPPEGLKPYTSAELRGRSVYIANGCVYCHSQQPRSES
FAPDAKRGWGRASVPGDYVYDKPHLLGSMRTGPDLMNIGVRQPSKDWHLGHLYQPRAYVPGSIMPSYPYL
FEIKDKAEPGEEALNLPPGTAPAGKVVVARPEMLDLVKYLLSLKREYPVLPPEPHEAAGAKTPSAPPAGK
PASAS
>gi|319763498|ref|YP_004127435.1| cytochrome c class i [Alicycliphilus denitrificans BC]
MSQDPVTRAQQRENEDPEEAIRPMPLSALLVAVAMVLWAVVYILYTEPLDLSQWGDQRTRAELSGPAPAA
PGAAVDGKALFAAQCAACHQATGLGLPGVFPPLDGSEWVQGEPRVLANILLHGITGEITVKGTRYQGAMP
SFQQLGDAELAGIASFIRSSWSNKADAVQPELFAKERKASDRTTPFEGEAALKALQQ
>gi|319763499|ref|YP_004127436.1| hypothetical protein Alide_2818 [Alicycliphilus denitrificans BC]
MLRTALLSAVLVLCGLAAARWLTYDFQVWTDEGARRLEVALRPVQAPPVAVQGPGVAAPDLPALLAAGGG
ATVVDFFYTHCETVCLSLGSSFQQLQAALQADQSKGEASGVRLLSISFDGARDDPAALQAYARGLRADPA
LWRFVRVPDGAQQQALLRRLGVVVVPDGRGDYEHNAALLVFDARGRMVRVFDIAEQQLALDYARHLARRP
R
>gi|319763500|ref|YP_004127437.1| hypothetical protein Alide_2819 [Alicycliphilus denitrificans BC]
MRPPAWCTPARQGLAGLLLAALLASPPLRQWLEASMWRHMLLQFPPWMLAGALLAAALPPRARGGIARWN
AHGIAGLVGVGVALSVLMVPRVLDLALQDAGTEAAKCAALLLAGAAIRLSWGPAGLVVQCFFLGMQLPMM
VVVGQLYIDSPLRLCNAYLLDDQERLGRWLIAVAALLALAWLAHAAWRLVRREDARLAGID
>gi|319763501|ref|YP_004127438.1| valyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MPFFIAMSDTPAQPGLQSLSKSFEPAALEAHWGPEWERRGYGRAGARGTGQADAGAPAFAIQLPPPNVTG
TLHMGHAFNQTIMDSLTRYHRMLGHNTVWVPGTDHAGIATQIVVERQLQEQGASRHDLGRPGFVEKVWEW
KEKSGNTITTQMRRLGDTVDWSREYFTMDDKLSRVVTETFVKLYEQGLIYRGKRLVNWDPVLQSAVSDLE
VENEEKDGSLWHIAYPLADGSGQLVVATTRPETMLGDVAVMVHPEDERYRHLIGKSVKLPLCDREIPVIA
DAYVDKEFGTGVVKVTPAHDQNDYAVGQRHQLPMICVLTLAATINDNAPQKYRGMDRFAARRAVVADLEA
LGLLVETKKHKLMVPICTRTGQVIEPMLTDQWFVAMNKAGQGDATGKSIAQKAIDAVAGGQVSFVPENWV
NTYNQWMNNIQDWCISRQLWWGHQIPAWYDEDGNVYVARSEAEAQAQAPGRPLRRDEDVLDTWYSSALVP
FSTMGWPDQGESATDDYNLYLPSSVLVTGYDIIFFWVARMIMMTTHFTGRVPFRHVYIHGLVLDAHGKKM
SKSEGNVLDPVDLIDGIALEPLLDKRTQGLRRPETAPTVRKNTQKEFPDGIPAYGADALRLTFAALASLG
RSINFDSKRCEGYRNFCNKLWNASRFVLMNCEGFDCGLDATQGCTESYLDFSQADRWIVSRLQKVEAEVA
KGFTEYRLDNVANQIYDFVWNAFCDWYLEIAKVQIQTGTEARQRATRRTLIRVLEAILRLAHPIIPFVTE
ALWQVVAPIAGLPGASIAIAAYPQAQPAKIDEAAEAYVARLQQMVDACRTLRGEMGVSPAQRLPLLAMAD
TAEDAAFLRANAAVLQNLAKLSEVKVFDDAPAWAAAAQAAPVNVVGSARLALFVEIDVAAEKARLSKEAA
RLAGEIAKANGKLGNEAFVAKAPPAVIEQEKKRVADFGATLSRIQEQLARLG
>gi|319763502|ref|YP_004127439.1| utp-glucose-1-phosphate uridylyltransferase [Alicycliphilus denitrificans BC]
MTTSPIRKAVFPVAGLGTRFLPATKASPKEMLPVVDKPLIQYAVEEAYEAGIRDMVFVTGRSKRAIEDHF
DTAYELENELEQAGKKEMLELVRSIAPADMNCLFVRQPRSLGLGHAVLCAEPLVGDEPFAVLLADDLMVG
EDGGPGVMAQMTAAFAKQGRSLLAVQEVPQEHTRRYGIVKGEAAGGALMRVDEIVEKPAPEVAPSRMGVA
GRYVLTPRIFEEIRNQPRGVGGEIQLTDAIARLMQQETVYAYQYSGKRYDCGSKEGFLEATVELALKHPQ
VGAQFRDYLRSLEL
>gi|319763503|ref|YP_004127440.1| sira-like domain-containing protein [Alicycliphilus denitrificans BC]
MDIHKEIDTRGLNCPLPILKAKKALADMESGQLLRVVATDSGSLRDFQAFAKQTGNELVEQQTMGDEYIH
VLRRR
>gi|319763504|ref|YP_004127441.1| nudix hydrolase [Alicycliphilus denitrificans BC]
MRYETRFCPHCATPLEFITLLEDSGDKERLRCGACGWTHWNNPTPVLAAIVEVDGRVLLARNALWPPKMF
ALITGFMEAGESPEEGIAREVKEETNLDARAVKLVGAYEFLRMNQVIIAYHVQAEGEVRLSPELVDHRFY
ELGELKCWPAGTGYALADWLRSRGHEPVFFTDEENAERRRGLDAPKD
>gi|319763505|ref|YP_004127442.1| cysteine synthase b [Alicycliphilus denitrificans BC]
MKTYPTIEDAIGRTPLVVLQRIGAQDNAARGNVILGKLEGNNPAGSVKDRPAVSMIRRAEERGEIRPGDT
LIEATSGNTGIALAMAAAIRGYRMVLIMPEDLSVERAQTMKAFGAELILTPKSGGMEYARDLAEQMVAQG
KGVVLDQFANPDNPRIHYETTGPEIWEQTEGRVTHFVSAMGTTGTITGVSRFLREKNPGVRIIGAQPCEG
SRIPGIRKWPEEYQPRIYDPQMVDELVLVHQDDAEDMARRLAREEGIFGGISAAGACWVAQRIAEREQNA
TIVFVVCDRGDRYLSTGVFPA
>gi|319763506|ref|YP_004127443.1| hypothetical protein Alide_2825 [Alicycliphilus denitrificans BC]
MNTTKTLRLGPLPKTESTKITFSCPISLKAELDRYAALHAQAYGDAVDAVTLIPYMLDAFMAGDRGFRRR
QAKNEKATPA
>gi|319763507|ref|YP_004127444.1| conjugation trbi family protein [Alicycliphilus denitrificans BC]
MSQDDTPHLATPQAGKVAPEAMALRAQPRPVTRLNRRTLAILVGGLSVAVLGATIWSLQPHRRGAGEQTE
LYNVDRVSKSEGLDGLPSDHSKLPAKVPELGPPLPGDLGPAIVKSQQPVTPTYAPPGHDPEDARRKEADA
VAGSSVFFRSGNQGKAAAPGTAQVAAAAPGSALAGFDPLAAGPASTAAQPSDPTAVQNRQDQKEAFLKAG
STETRNSGNLQMPTSPYQVMAGTVIAGALVTGIKSDLPGDVIATVTEPVYDTATGKFLLIPQGSRILGKY
NSQVSYGQSRVQVAWNRVILPDTSSLKLDNLVGADPAGYSGLEDGVDWHWDRVFAGAALTTLLGVGAELA
APENRQDGNRIVIAGRDSAQDSINQVGQEMTRRNMNIQPTLTERPGLPVRIIVNRDLVLRPYQPLFFNRG
VAK
>gi|319763508|ref|YP_004127445.1| p-type conjugative transfer protein trbg [Alicycliphilus denitrificans BC]
MNDLFRKSALPVMLLASTVLFSGCATQGKPPPSISLDEPVQAQPLPEPPAPVEVVAVPQVLPMPAQMKPV
PDAKPTPEPADETVRVSRANAEARIAPTREGYVNAIQVWPFTDGALYQVYAAVGRVTVIALQPGEELVTV
AAGDTVRWIVGDTSSGSGDALRVNVMVKPIRSGLKTNLVITTSRRTYLLELTSTEKTWMASVSWEYPKDK
MLALQRQAQAASAAAPVDAGLSLEKIRFRYAVSGSNPPWKPLRAFDDGEKVYIQFPPGIAQGELPPLFVI
GVQGDGQLVNYRFRAPYYIVDRLFGAAELRLGGDKGDVVRIERTDGTRRN
>gi|319763509|ref|YP_004127446.1| conjugal transfer protein trbf [Alicycliphilus denitrificans BC]
MRFKRPQVRYADTPQPATPYQSAAQIWDERIGSARVQAKNWRFMAFGCLTLAVLMAGGLVWRSAQSIVTP
YVIEVDNAGQVRAVGEAATPYRPSDAQIAYHLGRFIGLVRSLSIDPIVVRQNWLDAYDYTTDKGAVVLNE
YARVNDPFARIGKESVTVQISSVTRASDTSFNVRWTETRFVNGALDRTERWNAVVSIVQQTPRTEQRLRK
NPLGIYVNGLSWSRELEGNEGAKP
>gi|319763510|ref|YP_004127447.1| p-type conjugative transfer protein trbl [Alicycliphilus denitrificans BC]
MNDVTIIDRFLDTFSRYIDSGFGLLHGEVAFLTATLIVIDMTLAGLFWAMSHATGQGEDVIAKLIRKVLY
VGAFAYIIGNFNWLAGIVFRSFAGLGLTASGSTLSMGNFLQPGRLAKVGIDAGAPILKQIGDMAGFPEVF
VNITPIVVMFLAWLIVLLCFFVLAIQLFITLIEFKLTTLAGFVLVPFALWNKTAFLAEKVLGNVVSSGIK
VLVLAVIVGIGSGLFAEFQVQPAEPSIDHSVVVMLASLTLLALGIFGPGIATGLVSGGPQLGAGAMAGAA
LGAAGAAVAVGAAATGVGGAVAAGARMAPAAARLADSGARAATGAASSARSAFQAGSASAGGGLRGTAAG
VGNVAKTGAQAAGQKVAEGARSMREHVAAAFRPDDAGSASGAGAAQAANEPTPSTAQPAWAKRLHRRQQL
THAATTAAHTLRGGDGGSSSQGPSLRDSDS
>gi|319763511|ref|YP_004127448.1| lipoprotein [Alicycliphilus denitrificans BC]
MQRTPVVFAFAVHALVLAGCDRQQQLPVNALAADPARLHALRAQCRTGAHDGAFCAQMAQADLRRFLSGQ
AEPGEYQTLADMPPIPPSFDEPADADTPGQEDSP
>gi|319763512|ref|YP_004127449.1| p-type conjugative transfer protein trbj [Alicycliphilus denitrificans BC]
MKLHTPKLAALTAACVLAFGIAQPAHALFGVGDIVLDPTNLVQNTLTAVRTLEQINNQIRQLQNEAQMLI
NQARNLASLPSSVVGQLRANLATTQRLIAQAKGLAYDVTSIDREFARLYPEKYAATVSGNQMYLDAQERW
KNTLGGLQTTMQMQAQASQNLSDDESVLADLVGKSQSAEGALQAMQAMNQLLALQAKQSIQTQRLQITQD
RAASLELARQAAATERGREVTRRFLGEGTPYTPQSVNFYNR
>gi|319763513|ref|YP_004127450.1| cage, trbe, virb component of type iv transporter system, conserved region protein [Alicycliphilus denitrificans BC]
MLNLAEYRQRPALLADWLPWAGLVAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATSARLNNALRRLG
SGWALFIEAERRAAADYPHSEFPEPLSWLVDAERRAAFEESGNHFESGYHLTLAFLPSVESRARAAGLLY
ENRPTEGVDWRERLHAFVAETDRIFDLLDGVMPEIAWLDDSQTLTYLHATVSTRRYRIGVPEVPFHIDAL
LTDSVLVGGLAPMLGDQHLRVVSVRGFPTSTWPGILDDLNRLGFAYRWSTRFLCMDKAEAEKELVRLRRQ
WFAKRKNVIALLRETIFQQESPLVDTDANNKAADADAALQELGSDQVAFGYLTATVTVMDEDASAADEKL
RMVERVIQGRGFVTIPETLNAVDAWLSSIPGNAYANVRQPIVSTLNLAHMMPVSAVWAGPEKNEHLDGPP
LIVTRTDGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLATLAMQFRRYRGSRTFAFDMGRSMRAAILGLG
GEHYDLGTDGEIAFQPLARIDREGYRTWAAEWIEGRLLHEGVAVGPDEKAAIWSALGSLAGAPVEQRTMT
GLSVLLQSNTLRQALAPYVLGGAHGKLLDADHDRLGMADVQCFEMEELMHSKAAVMAVLHYLFARFDERF
DGAPTLLILDEAWLFLDDPVFAARIRQWLKTLRKKNVSVIFATQSLADIKDSSIAPAIIESCASRIFLPN
PQATEPQIRTIYEGFGLNRRQIEIVATAQPKRDYYYQSRLGNRLFDLDLGPATLAFAGASTPQDQRDIDR
VLLDAGVPGFAGAWLRHRGLDWAADLLPSFPGLAPGSLRTADHPQENQP
>gi|319763514|ref|YP_004127451.1| conjugal transfer trbd transmembrane protein [Alicycliphilus denitrificans BC]
MSGPDTFAAGFEVPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGVVLWIVGHSLAVWGARV
DPQFMAVFARHIKHQSLLDV
>gi|319763515|ref|YP_004127452.1| conjugal transfer protein trbc [Alicycliphilus denitrificans BC]
MTHVDAFRISVNPLSRRSSPARLDGLARPAMQGLMLAAFMLLLAGTAQAAGSSMPWEGPLQSILESIQGP
VARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV
>gi|319763516|ref|YP_004127453.1| p-type conjugative transfer atpase trbb [Alicycliphilus denitrificans BC]
MSARISIEGQSMTATSLDRRIQMLRTAMGPLIAAALEDPDVVEIMLNPDRTLWIDRLSSGRAPMGVELSE
ADGERIIRLVAAHVGAEVHRGQPLLSAELPETGERFEGILPPAAPGPAFALRKRAVGVIPLSRYIEDGML
TAQQAGFLVRAVHERQNILIAGATSSGKTTLANALLAEIAATGDRVLVLEDTVELQCAARDHVPLRTRAG
VVSMTELVRSSMRLRPDRVVVVGEVRGAEALDLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVN
PPRALIAEAVNVVIYIAGRGRKRRIESIARLNGFDGVGYQLADALETPFPELLPQSDLSSLSPDNSGELP
>gi|319763517|ref|YP_004127454.1| copg/DNA-binding domain-containing protein [Alicycliphilus denitrificans BC]
MSHYRLNLFIQPEHAKRLDELAAKKGVSKSSIVAAALASWLSPDAADQREAAIAKRLDRLSRQAERMERD
QNIQIETLALFIRYFLTVSTPVPEAHQDAARAQGKARFEQFVEQLGRHLLRGRSLVRDVVEELHPDPMRM
EDAAADAQAWEHAS
>gi|319763518|ref|YP_004127455.1| trag family protein [Alicycliphilus denitrificans BC]
MQGTNVLFGQIAVVFGIVIAGVWAATQWTATALGYQLRLGSPWFDFLGTPVYHPWKLFEWWFVFDAYAPE
VFNTGGMMAGGSGLVAVLVAIGMSVWRSRQSRLVTTYGSARWANAQDIRKAGLTQPTGVFLGQHDRQYLR
HEGPEHVLTFAPTRSGKGVGLVVPTLLSWPASAVIHDIKGENWQITAGWRSRFSHCLLFNPTDAKSAAYN
PLLEVRRGAHEVRDVQNIADILVDPEGALEKRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPS
CPFELTLHRMMTTRHLGDAPHPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIA
DLISAEHPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIMRRHKLLLMLDEFPALGRLDFF
ETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLGTATELRAQRN
YAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDEAVVMVSGVAPIKAKKLRYYADSNFKRRVLPPPV
LAGGQYADAPPSRPDDWSALAIPAVPAAPATASVDGLENLGSADDGGPRRQPELTEAVVYDPELAASAAD
LALLDDDDLPLPLPRQLDPAMQRTARLASLNPNDGIEL
>gi|319763519|ref|YP_004127456.1| hypothetical protein Alide_2838 [Alicycliphilus denitrificans BC]
MNKVMLLMVVAALTACGPSQPSETVDALAANPDRIKEIQRQCREDRSKVGDELCLRAAEAANRRFFGDRP
EQKSK
>gi|319763520|ref|YP_004127457.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MELRHLRCFTAVAEELHFARAAERLHIDQSPLSRTIKELEEDLGARLFVRTTRSTQLTRAGRLLLEHVPR
IFAALEQARDSVRSASNGYHGQLRIALSDGITPSRLPALLAQCREEDPEVEVRLFEVSMAQQIKGLHDEL
YDAGFSMAEDVGDGIVVTPAWEDELMVAVPARHPVLAFKQIPLEEVLHYPLVLGDPLICEGHARQVDRIL
RKYEREPLIVQHVASFDLMMTLVSAGLALGLAGAAHVASSRELGVVARPLAGKPPMLTTYLLCRDTEAPE
MLARFIDRVASIDSAESLSSIGNPRSTR
>gi|319763521|ref|YP_004127458.1| hypothetical protein Alide_2840 [Alicycliphilus denitrificans BC]
MRHMLLASLWRWLIVITAAFALGGCAVVSEFKPSVAVRAMTPDEYVALRRGDLLGRGKLSAPTLQTIRVT
GLDERVCATNTSLTCIEALTMMKDLDGETRLSALAELWLQHAMSISTAVPNSRIVSTSAWIETARHAYAY
LFFTRRSPGERAFEERQTQVRDWYNYAVQKTVTQLFGLQHQALRAHAGETKATLRLGDWALRVDLNARLP
NDATTPRELLPANALAFQGLRGIYRRDGLGAELVAVTEADPKSLDESDESSAGNERPGVFPAWSEMPTPN
VTVVLRFDALTVDELLASRELVVGVYDPLVQDYLQLHGQRVPLAGNFTAGYGLWLARSGFNQQSLRGLFG
RERGIDQPHLYLMQPFDPRRRIIVMVHGLASSPEAWVNVANELLADEELRCEFQVWEIYYPTNMPVPASH
AAIRQVLAAALHHFDPEEETLASHGLVLIGHSMGGLLARLMVSTADQQLWEWAASDPRIDLNRLGSTRSQ
LDPLLRFQPFPGVDRVIFVATPHRGTVVAGQGLGRWVAGLIRLPLTLLSTLGDAFPARAEIMATAQATIL
QNIPNSIDQLDENDPFVKATSELPISDQVSYHSIIARRQANGPLAESDDGLVPYRSAHLEGAESEEIIVS
GHSVQETAASVVEIRRILRKDISKHRLTAADSSSVRRGSCPPQR
>gi|319763522|ref|YP_004127459.1| phosphate acetyltransferase [Alicycliphilus denitrificans BC]
MNEQAPEGVRADPPSGVERLIAHVKTMAPVRTAVVHPCDALSLGGALDARDAGVISPVLVAPLAKLRAVA
ADTGLELGDSEVVDVPHSHAAAATAARLAGKGEVQALMKGSLHSDEYLGAILAPEACLRTERRLTHCYIM
QTASYPRPFIITDAAINIAPTLEIKADIVRNAIDLARAIGIAEPKVAILAAVETVNPRMLSTLDAAALCK
MADRGQITGGVLEGPLAFDNAVSPDAARVKGIKSAVAGQADILVVPDLESGNMLAKQLEYMGQADSAGIV
MGARVPIVLTSRSDSRRTRIASCAIALILAHRQRAFVQGEGSRV
>gi|319763523|ref|YP_004127460.1| uspa domain-containing protein [Alicycliphilus denitrificans BC]
MYSRFLVPLDGSPTSFLALDHAAELARLSGATVILLHIVEPTRHSTGFERPEVYIKDVRPRFLKAGQTLL
DEAASRLRREGIATETVLLESGTERVSEQIAHQTEINDCDLVILGTHGRRGMNRLLLGSDAEQVARIAPV
PVMLVRQSSRDGGPPSSAARAPVKASDNIGTSGWRSTGASKAKKSHE
>gi|319763524|ref|YP_004127461.1| acetoacetyl-CoA reductase [Alicycliphilus denitrificans BC]
MSSSGRTALVTGGNRGLGAAIARALDDAGHRVIITHTPGNEKVAAWLDAQDTKGYRFTAYGVDVGDWEST
QALARQIQADGHHVDILVNNAGITRDATLRKMDKAGWDAVLRTNLDSMFNVTKPFIDPMVERGWGRIVNV
SSINGSKGQFGQTNYSAAKAGVHGFTKALAQEVARKGVTVNTVSPGYLATEMVMAVREDVRQKVIEAIPV
GRLGQPDEIAALVAFIASDAAAFMTGSNVAMNGGQHMS
>gi|319763525|ref|YP_004127462.1| hypothetical protein Alide_2844 [Alicycliphilus denitrificans BC]
MNSELPIQLYKANAELQLQITRLLQESGHHWLEAMQQLSAGGVLETTSRIQNLQQAADWQALATLPSEVF
WRLCQGRMGDTQAVGRAAAKSQAAFADGLREALTTWQASVSEVFGASGGTASFAQFFQQWTQPWTAPGAA
PQGKAKK
>gi|319763526|ref|YP_004127463.1| poly-beta-hydroxybutyrate polymerase domain protein [Alicycliphilus denitrificans BC]
MSNVATHGKADLAQPEACRPDTLDTLANAWRARSTGGLSPAAGLLAWYDWALHLSLSPGKQRSLIEKGLH
KQQRLARYALRVASAHDCPTCIEPLEQDRRFAAPAWQQWPFNVIHQGFLLQQQWWHNATTGVRGVSRHHE
NMVTFAGRQWLDMWSPSNFIWTNPEVLHAITQSGGANLWRGAMNFLEDARRLALDDTPAGVEGFEVGKDV
AVTPGKVVFRNHLIELIQYSPTTPDVHAEPVLIVPSWIMKYYILDLSPHNSMVKYLVDQGHTVFILSWKN
PTAADRDLGLEDYRWLGVMDALDAVTAIVPERKVQAVGYCLGGTLLAIAAAAMARDGDERLQSLTLLASE
TDFRESGEIALFIDDSQLAWLEAGMWDKGYLDGKQMAGAFQMLNSRDLIWSRRVREYLLGERQTFNDLMA
WNADVTRMPYRMHSEYLRRLYLDNDLAEGRYRVGGRPVALADIEVPMFIVGTVRDHVAPWPSVYKMHLLS
DAELTFVLTSGGHNAGVVSEPGHPRRSFQIATRAAGDRYIDPQLWRAETPMNEGSWWPAWQQWLAQRSAG
RVAPPAMGGTQAPLGDAPGTYVAMR
>gi|319763527|ref|YP_004127464.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MSQRPQYLSAEDRRAATVQAVVDLAAEQNPAEITTTAIADRMGLTQGALFRHFPTKEAIVEATMSWVGER
LLVSVDKAAEGAASPAAALEAMFITHIDFVSKHPGVPRMLFGELQRSGETLAKRMVQTLIRQYEQRLRRL
MEAGKAQGELSAELDVDAAAVLFIGTIQGLVMQSLLAGKVSRIRRDAPAVFAIYRRGIESGT
>gi|319763528|ref|YP_004127465.1| hypothetical protein Alide_2847 [Alicycliphilus denitrificans BC]
MTAHSGRGIWMRVIALIAIAFGLLTIREGGAVLFFDGAARAAAGSYVPFVLWFNFLTGFAYVIAGAGLWM
RRRWAAWMSMAIAVATALVFLAFGVHVALDGAWERRTLIAMTLRTLVWVGIAAMAWRRSTAHAPTTREH
>gi|319763529|ref|YP_004127466.1| secretion protein hlyd family protein [Alicycliphilus denitrificans BC]
MTTPNLPTRKARWAVIIVALLALGGALAFWFTRGHDNQDALRLYGNVDIREVQLAFRQPGRITQMTFDEG
DVVTAGARLATLDAQPYQDALAAAQAQVQVAQAELAKLRRGLRPQEITQAREALRQAQAQALDAERNFQR
QSSLLASGASSQRTVDAARTARDQAAAGVESAKAALSQASEGFRKEDIEAAQARLAAAQAAAAQATTSLA
DTELTAPSNGTIIARVREPGSMVASQSTVYSLSLDKPVYVRAYVGERDLGRIAPGTVVHVRSDSGEKVYR
GQVGFISPRAEFTPKTVETTDLRTDLVYRLRIVIDEADSDAALRQGMPVTIAVDAKPVSGARAGER
>gi|319763530|ref|YP_004127467.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MQADTAMAATPASAVAAAAVVIEGVDKHFGKVQALRSLSAHIHYGRLTGLVGPDGAGKTTLMRILTGLLV
PNAGRVTLAGFDVVKDNDAIHVASGYMPQRFGLYEDLSVMENMRLYAQLRGMDADRNADLFAELLDFTRL
GPFTKRLAGKLSGGMKQKLGLACALMARPKVLLLDEPGVGVDPVSRQDLWRMVQALTDEGMAVVWSTAYL
DEAERCESVLLLNQGQLLFDGPPQQLTAQLEGRSFRLENVGAERRAVLTEALDLESVSDGVIQGAGVRVV
LREGAQVSQIQSLADRARVALAPVPARFEDAFIDLLGGGPGGTSTLAERLSPVELGSEIAVSCRNLTKRF
GEFTATDQVSFEVQKGEIFGLLGPNGAGKSTTFKMLCGLLKPTAGEAHVVGHDLRRATGAAKGRLGYMAQ
KFSLYGLLSVQQNLEFSAGVYGLEGNTRRERIAEMIETFDLGEWLSATPDSLPLGHKQRLALACSLMHRP
PVLFLDEPTSGVDPITRREFWTHINGLARKGVTIMVTTHFMDEAEYCDRVAMLSRARLIALDTPDALKRA
AANVEHPDPTMEDAFIHLVESADREMEAAA
>gi|319763531|ref|YP_004127468.1| abc-2 type transporter [Alicycliphilus denitrificans BC]
MNAVAQRKEGAALEPSDLRRFDLRRLMALVTKESYQALRDPSTLLIAFVLPVVLLLLFAYAVSLDAKEVR
VGVVLESPGASAQSLAAAFSGTRFLKTQFAHDRREVADQLVSGALRGYVVIPQDFEQRLAQRGAEPLVQI
ITDGSYPNTANYVENYARGVVQTWRAGLDVAAPAQSVVLEPRYWFNPELESRRALIPGAIAIVMTIIGTM
LTALVVAREWERGTMEAVLSTPASVAEILIGKLLPYFVLGMLSTLGAAALAVFVFGVPMRGSLAALLLLS
AVFMVPALGQGLLISSLARNQFLAAQIALFTGFLPAFMLSGFLYEIDAMPAPIRAITRAVPARYFVDSLK
TVFLAGDIWAVFLPNLAAMAAIGALFFLIAKRATRKNLE
>gi|319763532|ref|YP_004127469.1| abc-2 type transporter [Alicycliphilus denitrificans BC]
MLTSAFSFTRLRAQFIKEVLSVLRDPRSRMVVFVPPILQLLVFAFAATLEVRNVDIAVYNQDAGRWSHEL
VQRLDSARFITHVRHVDSQRLLHEMIDRGEVIAALAIPVDFSRTIAAGDSGRAQVLVDGRRSNSGQITVA
YLSTIAADVGAEVVPDAQAPTPVVVRHWFNPNLVYRWFIVPGLTGILALFSALLITSLSIARERELGTFD
QLLVSPTSTPEIIVSKSLPALAIGTLLGLFMISAGVFLFGIPFTGSFALLLASLVLFILSVVGIGLMISA
VSMTQQQAILGAFAIGVPAVLMSGFATPVENMPLVLQWLAQAIPLTHFLIIVEGSFLKAMPPGDILASLW
PLALIALATLTMATVFVRGRLQ
>gi|319763533|ref|YP_004127470.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC]
MKTKTRHLSSRTPAAPPASRRLRPLGLALSCVLLTACAAVGPDYREPPPVDIGSGWTLPLASESQSADLA
RWWSALDDPILDRLMGTALAQNLDLRQAAARIDEARALRDRVAGDQMPTVSAGTSVNRRGQSKNGPLPVG
SIPGMDATQTIYDAGFDAAWEADLFGAKRRALEGASARLQATEVEAQGVRMRIVAEVARTWFTAVGAGYE
LHAQQATLDTLQQTLELVRLRHALGDASAADVEAAYAQWTAVNALLPDIQARQRAAVLGLGVLLGAPPEH
ELALLDGPLAPCTLRALPVGERADLLRRRPDVLAAERRLAASSADIGVATAELFPKLSIGVGGGFQALST
GNWFDASSSRFSILPLISWRLFDGGRVRAEIRAREAAEQQAALAYEQAVLAALGDAERALGDYHGGLDTL
ERRAMALDAARTSYGYAKARYAAGDVALVELLAAQRSLHEAETAAARAHTSAAVQLVALYKALGGGWEVS
NMTPSAAHSPTGAAAPTPRASRSGMPASAAATEHLTSQSAERETLTHLIINRPTEGAKP
>gi|319763534|ref|YP_004127471.1| iron-containing alcohol dehydrogenase [Alicycliphilus denitrificans BC]
MTTTAFFIPPVNLMGAGCLRDAAKAIQSYGFRKALIVTDLPLVRLGLVGNVRDLLASHGVDTLVFHGVQP
NPTTKNVADGLKQLRDNDCDFVISLGGGSPHDCAKGIALVAANGGTIKDYEGLDQSAKPQLPLVAINTTA
GTASEMTRFCIITDEARHVKMAIVDKHTTPILSVNDPELMLLKPASLTAATGMDALTHAVEAYVSTIATP
ITDACALKAVALISQWLRKAVADGRNVEAREQMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYDLPHGVC
NAVLLPHVQAYNKQVAAGRLADIARAMGEKTDGLGDEAAADLCLLAIRQLSADIGIPHGLSQLGVQAKDF
PTLATNALKDACGLTNPIQASHEEISAIFAAAM
>gi|319763535|ref|YP_004127472.1| hypothetical protein Alide_2854 [Alicycliphilus denitrificans BC]
MQTNVGNLDRIARVVIGLILLSLPLWLDSPWRWLGLIGIMPLITGLAGRCPGYRLLGVNTCPMQKKKPE
>gi|319763536|ref|YP_004127473.1| RNA-metabolising metallo-beta-lactamase [Alicycliphilus denitrificans BC]
MKLKFLGAAREVTGSCFLVEAAGLRFLVDCGMVQGGSAAAARNREPFPFDPAAIDFVLLTHAHIDHSGLL
PKLTRAGFKGAIYTTPATVDLLGVMLPDSAHIQESDAKRSAKRFRGKDPLPPLYTLQDARECLQQVRGIE
YDREFAPRVGVRARFRDAGHILGSAIIEVWVTEYGYPTKLVFSGDLGQPERPILRDPTPIEDADILVIES
TYGNRQHKDFSATEEEMIGIVEKTLFERGGNVIVPAFAVGRTQEVLYHLHRLTSEGRLRQPRVFVDSPMA
TEATRITREHLELFDEQAKRLAGWHARGENLPYLHFTESADESMALNQIRSGAIIISASGMCDAGRIRHH
LRHNLPRKECSVLFSGFQAQGTLGRQLVDGAARVRIFGDDIPVRAAIHSVDGLSAHADQPALMAWARGFK
QAPEQTFVVHGEPSAAQALAELLQQQLGWQVSVPERGRVVPWPDFLVVER
>gi|319763537|ref|YP_004127474.1| conserved hypothetical protein chp00730 [Alicycliphilus denitrificans BC]
MTPPADPDERLRAILDSPTYRLAYEDIDLLGQDDLRPLRLQLELLKPERILREQGVHSTVVVFGSARVSD
AATARDRLAVLEQRAGTMPGNSTLGRELVLARRRVEQARYYEEAQRFAQLISARFQQEGRCDFVVITGGG
PGIMEAANRGAFDAGARSIGLNITLPHEQAPNPYMCPELAFRFHYFALRKMHFLLHAKGLVAFPGGYGTL
DELFEVLTLIQTGKMQRIPVVLVGRDFWSRAVDFDLLLDEGYVSPSDLDLFTCVDKAEEIMGALERFYVD
RATDGAPS
>gi|319763538|ref|YP_004127475.1| hypothetical protein Alide_2857 [Alicycliphilus denitrificans BC]
MMRIGSLHARLSKANAQWSMRSITPLIACAVLGSTAARGAEPASSDGISRCLPEHALHWRGGTLRLENDL
FTGTDRNYTNGVALSVVSRDLQGALRPECLPQPIAWYTRFIGWADPEFWRDSGAQSASQNIVVRFGQSMY
TPEDKTRTDLISDDRPYAGLLYLGLAWNHRVHPQAASYEILDVRELTLGVIGPWSLAEQSQDLVHRVRGI
DRFRGWDNQLRNEPAFQMAMERKFKSYTEGAVRPGWSGDVIGSYALRIGNIETAASTGMELRAGWNIPND
FGSYPIRPGAENRPPSGVSDLRRTEPQSARAPKPGAHAFLNLEAKAVAWDFSLDGNLFRHSHHVSRRPWV
AQAAIGISSQWIVAGHGVRLAVMRVWRTREFDQQIGHHAFGSIALSMEF
>gi|319763539|ref|YP_004127476.1| hypothetical protein Alide_2858 [Alicycliphilus denitrificans BC]
MQAVTGAISKEEWTLVAELAPKIAKHAEPPLGEKMRILGWLGTDAGKFRGFDGQVQDAASAMGDAAKRGD
GQAVIAAFSKTQQSCLACHQSFRQSFVEQFYGSR
>gi|319763540|ref|YP_004127477.1| acetate kinase [Alicycliphilus denitrificans BC]
MSNSQPSLILVLNCGSSSIKFALFDAQVRPLPREPLWHGKVQGIAGPAPEYSDSGTAQQRIHLDHEHPHT
AALALIQARIVARLDGRRIVAIAHRVVHGGSRYFEPTVVTDGSIAELRALIPLAPLHQPFPLKAMSLLFE
QWPGIVQVACFDTAFHRTAPKVEQILPLPYSAWERGLRRYGFHGLSYDYMSHVLPERHGDLARGRTIVAH
LGSGASLCAMQNLQSIATTMGFSALDGLMMGTRTGSLDPGALLYLMEIEKLSLEEVGRTLYNQSGLLGVS
GISAEPRVVVKHESDSGEVGERARIALALYVRRIVREIGALIAVIGGLDLLVFTAGVGEHNAFVRERVCR
DLAFIGIKLDADANAIDAPVISTTDSRVLAAVEPTNEEWITARYTQDLIGGA
>gi|319763541|ref|YP_004127478.1| d-xylulose 5-phosphate/d-fructose 6-phosphate phosphoketolase [Alicycliphilus denitrificans BC]
MTTASTIRQCWLAGHGPIVHRDETIKRMETLVTRLIVEGRVADETTAYTLLAAADRLSCVAMNVVAHMTY
ARRIDLSGAALSAEDFKPTPEGHTGGSLNMVQAFVGYLLANALTGSTRGWIMGQGHCVAAIEAVNVLTGD
VSPAQRGRYDRSEQGLSRLCADFYSYAIDAQGRPAVPLGSHAGPNTAGAVSEGGYLGFAELQYIHMPLPG
ESLVAFLSDGAFEEQRGPDWAPRWWRAQDSGFAVPVMILNGRRIEQRTQIMQEGGAQWLADDVRHNGFDP
VIVDGRDPAAIAWAIVEAEGALRAFAADPDRRYPAPLPYVIAETEKGFGFPGAGSNAAHNLPLGGNPHTD
VAMRGRFNESAAALFVAPVELDATLTAFATHAAQQRPLESSHPMAHRHPAAPRLPEPRWEISGSEGSAMT
ALDQWFVEFAKANPELRMRIGNPDELASNKMGGTLALLKHRVNEPEPGVPEDLHGAVITALNEEAVAAAA
LGNKGGLNLIVSYEAFAVKMLGLMRQEIIFARHLRQVGQPAGWLSVPLIVTSHTWENAKNEQSHQDPTIG
EALLGEMSDTSRVLFPVDGNTAVAALREIYAGRGQLACLIVSKRDVENRFDAESAQRLIRDGAAHLIGDP
AEAEVQLIALGAYQLDEAIKAQQHLAGMGKRACVTVILEPGRLRIPRDAMEAEFVDEDATVSTLFPQGLP
RVILTHTRPEPMLGILRRIDNGPTRTHALGYISRGGTFDVPGMLFANRCTWAHTVDAAATVAGWNREALL
DPAQRAALDGTGDPKDLLSP
>gi|319763542|ref|YP_004127479.1| hypothetical protein Alide_2862 [Alicycliphilus denitrificans BC]
MKQLTTLLLAAALAVPLTSMAASAHDSHGSAETHQLQLNAGKKWDTDAPLRQAMTAVHASVTKILPAAHA
GKATAADYDAFGNAVGQQVAYMVENCKLPPEADAQLHIIVADLVAGAEAAQGKHGEGKRAAGVVQVAQAS
NAYGKYFSHSGWKAVKLPH
>gi|319763543|ref|YP_004127480.1| hypothetical protein Alide_2863 [Alicycliphilus denitrificans BC]
MKHPTWIRTLLAVSLALNLGILAALVLRPARVAPPPAPAVHLPDYLALTPGQRTRWEALEAPFLHDLSSN
WDDIRHRREALVRHIFAAAPDRAAIDAEQAAIARLQAAQQQRVITQLLAERELLDTAQRERLLQLLLGRY
AQEATEEELLHRK
>gi|319763544|ref|YP_004127481.1| transmembrane anti-sigma factor [Alicycliphilus denitrificans BC]
MTCPRIEDLSAFVDHALPARRQAALQSHLRACPVCSQQLDALRALRQELHALPSPTLGFDLAAQLQERLR
DRRPPRAARPRRAGWDLLGWMPTGLAAGAALVSGLWMGGLLLGTGAAIPTTFAAADPAMARVFDPVPPGG
LCAATEICRLPRNLP
>gi|319763545|ref|YP_004127482.1| RNA polymerase sigma factor, sigma-70 family [Alicycliphilus denitrificans BC]
MPQPSQFDETDCIARAQRGEVAAFSELVTRNQDRIYRFLVRMTRSQEDARELTQETFLSVYQALPSWRPQ
AQLSTWLFRIARNQALDRLRRARHVEFVALDDALHQQVPADTPTPEAMLQARQRIAELERALARLSVEHR
EILLLRDIEDMPYEDIAQVLGIGLGTVKSRIARARAGLLQHMPR
>gi|319763546|ref|YP_004127483.1| hypothetical protein Alide_2866 [Alicycliphilus denitrificans BC]
MKRNLHLKPRLATLVLAVAALPAVASSDCDAPAARWQSREAVRQMAAQQGWQVERLKIDDGCYEIRGTDA
QGQRFKAKLDPETLQVLKIKSRERDDHHKDRDRERERRRDHTPQDAGTAPSSPLFTPGSAPRGQVQ
>gi|319763547|ref|YP_004127484.1| hypothetical protein Alide_2867 [Alicycliphilus denitrificans BC]
MSKPLITAIAAACALAVPALGQAREVTIATQLKNYGGDGAYLAVYLTDAKGAYAGTLWVAGGKAKYYKHL
ADWSRLSAGDAKRLNGVTGASVGAGRTLRVTADLADALIDAGYEIRIDAAVEDMRDSPSEVRLPLTAAGA
GKAQAGKQYIQSASFQLK
>gi|319763548|ref|YP_004127485.1| flavodoxin/nitric oxide synthase [Alicycliphilus denitrificans BC]
MNWKAVHRWLGLSLGTVALVLGLSGALLALDPVQEAWQAPTAPADLPVATLVQQVQQAMPGVEEIRRLPS
GAVAAFGFDGDQAQARYVDATSGQLLGNYQPSSMPRWVKNLHRALLLGDGGRWGAAATALAMVLLSISGL
VLLVRRMGGWRHVAGRVRGTLAQRLHVLAGRVVLALLLLSSITALTMSASTLGLLELEAGPEPDVVSSAS
TGADLAPAQLPLLRDLGVGDLHRVNLPDAGDPTDTWQVATTRGQGWIDRHSGDTLAWQEATLAQRLDDWA
RVLHTGESAWPWAVVMGLAGLCVLLFWASGVLIWWQGRRNAVHIADNSRLQQAEVLIFVASEGGSTWGFA
QALHAALVRAGRRVHSSALEHFQITPTAQQVFILAATHGDGQPPAHARHALERIAAQGGSGVPVTVLGFG
DRQYPAFCAYAQAVEQALRAQGHASLLPLELIHQQSAQQFARWGEALAQALGQPLAIDYRPRLPATTALT
LVERREYPGQADRPTAILRFAWPRQPWFARLLGCGLGRFEAGDLVGIVPPGNAVARYYSLASGSADGFLE
ICVRQWPGGVCSAHLLGLKPGDSTQAFIRANPGFTLSGRPPSVLLIGAGTGVAPLAGFIRRNDERTPMHL
YFGARDPATDYYFGSEIARWQAEQRVASVNTIFSRVPGGGYVQEILQRDAERLRKLLAAGAAVRVCGSRP
MAQGVGEVLDALLAPLGLDVNALKAKGRYAEDLF
>gi|319763549|ref|YP_004127486.1| apbe family lipoprotein [Alicycliphilus denitrificans BC]
MHRLQLHGPTMATRWAVSCDVPPVLDTNALCQALAEAVEQVDAQMSPWQPESALNQLNRAPVGDWLALPA
QILEVLARALEVCRLSDGAFDPAVGALVDAWGFGAACDTPDAEAIRAARNAKRLPTPQALELDLAAGLAR
KHSPLQLDLCGIAKGYAVDRMCAVLTGHGVCHALVALDGELRAIGPQASGAPWAVALESPRAGLRAAHGV
IELQDLAVATSGDYRHFVQVGQARLAHSMDGRSGKPVNNGVASVTVLAPRCMDADAWATALLVAGSGQGL
ALAHRHGLDALWLLRRGEALVELGSGRFAAAASAGTA
>gi|319763550|ref|YP_004127487.1| hypothetical protein Alide_2870 [Alicycliphilus denitrificans BC]
MQVATTIASIGIAAALLGNTALAGDHSDRTQRHASRAERIEALNAPWQAIPNSAEAGSPGHGWQYFFNPQ
AARAVVISPDGHYYLSRGKGLRWIAAAQPAAETATAPWQAIANQAQAGMPGFGWQYFFDSIAPRAVVISP
DGHYYLSQGDGLRWVAMAQQPTGRDASIG
>gi|319763551|ref|YP_004127488.1| cytochrome b561 [Alicycliphilus denitrificans BC]
MSRTTERYHPTLITLHWLTLLLMVGVYALIELHDGLPKGSAERALAKSWHESLGILVFAVVVLVRLPLRW
MLGQPSELAGTPAWQSRLAHVMHWALYGLLIAAPVLGYLSLNAKGAPVSLFGLELPGLMAPDKALAGGLK
EVHEAIGTLGYWLIGLHAAAALVHHYLMHDTTLARMGLGRARLDPNSRDSR
>gi|319763552|ref|YP_004127489.1| cyclic nucleotide-binding protein [Alicycliphilus denitrificans BC]
MKQAINKRRQIPLSMPDPDPAACSLDMRMAVCRKVPLFADLDDGQLAQVNRHCQAQNFAAGEPVYLEGDA
ATHIYVVAIGAVKTTRLAADGRQSLIDLLTPGDFFGALPALGQQFYADSATALTPACLLGLDAPEYDAIL
QEIPQVAVATLKGVAHRLTQSQHAIHMLAGAPLEQRLAALLLVLADKVGKPWNEAMLLDVPLAREDLAAM
AGAATESVSRLFSQWQREGWIDAGRRWVAIVDAARLEQVRDGMV
>gi|319763553|ref|YP_004127490.1| heavy metal transport/detoxification protein [Alicycliphilus denitrificans BC]
MTNTNTRTTLRAEGFSCPSCVTKIEKSVGAMAGVSHVKVHFASARIEVDHHPETVSADDLIAAIAKVGYT
ARASAF
>gi|319763554|ref|YP_004127491.1| heavy metal translocating p-type atpase [Alicycliphilus denitrificans BC]
MNKINAWINGRWTTPALSGLLILASFTASKGYGAALAAQWLMVAAALVAGAPIVRNAVRALAVRHISIDL
LVSIAAVGALIIGEYWEAAAVTFLFAIGHALESATLNKTRAALAELIAVAPDTAIVMRKGEQVEIPAASV
AMGEVVLVKNGAKVPVDGEVIAGTGALDEASITGESIPVEKSKGDHVFAGTISRGGFLQVLATGIGADTT
LARIIHRVEDAQDAKARTQKFIDKFSSWYTPAIVVLALLAGLISGSVVLGLTLLVVACPGALVISIPVSI
VAGIGRSARDGILIKGGEFLETAAKIDVVAVDKTGTLTKGRPQLTDVVALAPGVDKNQVLAWAARAEAGS
EHPLARPILEAAEQAGIAVAELPEHIEPVIGKGITARVEGKRVLIGNLALLEQFGVADTVGADRQAHQLA
TQGRTPMIVAVDDQVLGVIAVADEIRRDAAAMVAALHKAGVKKVVMLTGDVKPVADAVAAATGIDEVHAG
LLPEDKLDIVARLQRAGHVVAMVGDGVNDAPALATADVGVAMGAAGSAVAVETADIALMGDDLLKLPEAI
SLARRTLANIRQNIVIALATVGLLLTGVLMGGVTMAAGMLFHEGSVLIVIANAMRLLRRATPAHSAPLST
VARESAPSI
>gi|319763555|ref|YP_004127492.1| hypothetical protein Alide_2875 [Alicycliphilus denitrificans BC]
MTDRRDDDFRIRPGVPKNRGQGFVSKVLKQAGKAGSGTSAVRRPATASGTGRGTGQRPGSRLGRGHTAAR
FAGAKLTPMSRRVTTKTLLVNQRQASPQSLAKHLRYIERDGAGRDGEPGRAYGPQTDAADLDAFKERCAD
DRHHFRFIVSPEDGAELEDLRTYTRHLMNRMEADLGTRLEWVAVDHWNTDNPHTHLIVRGRDDTGKDLII
AGDYIADGFRHRASELATEWLGPRTELEIQQTLQCEVEQERWTSLDRTLKRELGDGGQVQIERFNEPRLQ
RQRLLLIGRLQRLQRLGLADEVQPGTWAVHSDAEKTLRALGERGDIIRTMQRAMNGEPRELAVFEPGDDG
RRVIGRVAAKGLADELRDRGYLVIDGVDGKAHYVALNARVELANYPTGAVVEVKGSADMRAADKNIAALA
NDGLYRTDHHLAIAQGQAVPGRDPQEVVAAHVRRLEALRRAGIVERVTEGLWKVPDDLAEQGRRYDAQRL
GGVAVELKSHLPIERQARVIGATWLDQQLIGGGLGLGGLGFGSEVKDALQKRVDFLAEQGLVERRGQRVI
LARNLLNTLRSRELAQVAKDIAAETGLEHRPVADGRRVAGIYRRSVMLASGRYAMLDDGMGFSLVPWKPV
IEQRLGQQIATTMRDGVASWDMGRGRGMSIR
>gi|319763556|ref|YP_004127493.1| peptidase s26, conserved region protein [Alicycliphilus denitrificans BC]
MTAVSTTGTALRPRSRLRARLVLAGLSACGLAALAWASFVHPIPRLIYNPSDSVPVGWYRVDPLGHGTGS
PPRPLSVGSIVLVSLPAEAAALAAQRGYLPARVPLLKRVGAVASQEVCVTGRIVRIDGVLSATVLPADRW
GRPLPSWQQCQRLEPGELFLLSVTNPASFDSRYFGPVSAAAVIGVARPVWLESRP
>gi|319763557|ref|YP_004127494.1| hypothetical protein Alide_2877 [Alicycliphilus denitrificans BC]
MIASTSPAPAPVAFAATAALAAPSGQPASAPLTRVALTYIEPRFKLYLRFGEPARTLKLDRWRRCAVFLP
GAMFCRIRWQANDYGTIRWQLMVMQACTTLDAAQRIPGVQPGARLLLHAEGENQVRAVLERIDAIEALGI
APAAVSPAYWRTLANRLAARLPLPEYTVERHAAWLTRRVLP
>gi|319763558|ref|YP_004127495.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MKAYIDRHRDDYGVEPICRALQMAPSCYWRHAARQRNAQLRSARAQRDEGLKADIQRVWHANWQVYGADK
VWLQMNREGIVVARCTVERLMRAMGLQGARRGRAVRTTTPDTSAPCPLDHVNRHFHASRPNELWVSDFTY
VSTWQGWLYVAFVVDVYARRIVGWRVSRSMQTDFVLDALEQALYDRQPAAHALTHHSDRGSQYVSIRYTE
RLDQAGIQPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGI
PPAEAEANYWRQLAASDTSTKVST
>gi|319763559|ref|YP_004127496.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319763560|ref|YP_004127497.1| integrase protein [Alicycliphilus denitrificans BC]
MAKIKLTKSTVEAAEITGKDYELRDTSVPGFLCKVTAHGRKVFMLQYRTNWGERRKLNRPGF
>gi|319763561|ref|YP_004127498.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MPSAINRTDVRYFMYHGHMQLVIDTRLPGGVRRITLNRPEAKNAFDAEMMQAISQSFRDAAKDPETRVVV
LSGAGSHFCAGGDIEWMKETLAASQMLKRERAQAVSDMLGSVHALPQPLVAEVRGAAMGGGFGLVCCADF
VVADSGAKFALSETRLGIVPAAISPYVVAALGVRRANRLALAGTLIDAQEAKELGLATHVAAPGGTAEAV
DSLLHELLCSATGAQRLTKALFRQMASPVSDERNAALAVEALVNAWNQQEAIAGLDAFLNKAAPPWRA
>gi|319763562|ref|YP_004127499.1| transcriptional regulator [Alicycliphilus denitrificans BC]
MARPAGVSGADTKQAIRAAAIQRIYRHGYEAMNLRGLAADVGLRVGSLHNYIPQKQEFLANLLDEIMTEL
LADFETHMAGVSDPQEALRQFVSFHVQWHTARKEEVFIGNMELRSLAPEQYARVAAKRKQYEKHLTAILS
KGKKLGVWTIENPGITAKAILALLTGVSNWYRPDGSLSQPRLTKLYQLMVERMLRNP
>gi|319763563|ref|YP_004127500.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MNATAAASQLCLTDLFLKRVQMHPDKPALSHADRTLSYRELEARVQRWAAFLQACGLLRGQRMAVWSENR
PEYLELQLAAARLGVMIACLNWRLQGAEQLHCLRLVEPAVVIVSARYREQLGTLEHGVARVIDLDSPDAS
EESTRALEDRDFLRPEVHPEDGFLILYTSGTTGLPKGAVISQRASIARAMAYACEYGIGAEDGFIAWSPF
FHMAATDHSLATLMLGGHVIVQDGFSASEICKTLERERIGWLMAMPGVIEPLINALKSASPFLAPRMGMV
GAMADLVPCQQIAELTSLVGAPYLNSFGSTETGLAPASGALLKAGQVPESLSKRESSWCHVRLVDDDNQD
VPIGTPGNMLVRGPGLFSGYWSNGRIESAELADGWFHLGDVFVRHADGSLDFVDRSKYLIKTGGENVYPA
EIERVLLAHPDVIEAAVVRRSDDRWGEVPVAFVALKGESRPLDFLQAYCREHLAGYKVPKEFRVISAAAF
PRNSTGKIQKRQVEALLRS
>gi|319763564|ref|YP_004127501.1| pyruvate carboxyltransferase [Alicycliphilus denitrificans BC]
MSLPIRIEIHEEGPREGFQIEKPGFSIADRAGLVEALAQAGLPQIQVASFVNPVKVPQMADAPELFRAIR
KQPGVSYTGLWLNEKGFERAVAVPEVDLEGVLYFYTSDAFCRLNNGVSAQAQAQDQRRWVERYAARGVPV
RKAYVLTAFGCNFEGAIPQERLKEVLADMASLQDEHRIRLDEVYLADTVGWANPRSVSERVELARRFFPH
ARIGLHLHDTRGTGMANALAGLQAGVDLFDASVAGLGGCPFSGHAHGGAAGNICTEDLVFMCNEMGLETG
IDLECLIEAARLAERIIGRRLDGRVMHSGSLKAFPTRSR
>gi|319763565|ref|YP_004127502.1| carbamoyl-phosphate synthase l chain ATP-binding protein [Alicycliphilus denitrificans BC]
MFSKVLIANRGEIACRIARTLRRMGVAVATVHSTADANALHVQEIGESVWIGDGPARQSYLDIDAVLKAA
QAVGADAIHPGFGFLSENPLLARRCAEFGITFIGPTPETLELFGDKSAAKLAAQRLGIPTAGGLANATED
AERVLSAISDLPLPCVVKAVAGGGGKGMRVIRSIEAAREAVEAAIREGRSSFGDGRVIVERYLNKPRHVE
VQILGDGAGNVVHLYDRECSLQRRHQKVIEEAPVCSISDELRGQLWAHSVALGEAARYLGLGTVEFAVTQ
DAAVFLEVNPRLQVEHPVTESVLGLDLVELQVRTVADRRLAVQQAQVPAPCGHAVQARLYAEDAAQGFLP
STGRIEAFSVGLGVRADNGVIAGCEISPHYDPMIAKLIAYDSTRERALKRLREALQQTTVLGVTSNRAFL
ISLLGMPQVAANTVDTETIDEWLAAHAKSRECVGHVAALMAVWRHAVHRASAASGAWGDAALTGWRMRRD
PAGKAGMLSITPRYDVSTPSGRWKVGFGATRPDGLWPVRIDDELFDVGVGQPLADGSWLVTLGRRTMRMS
ARCQAGCAWADLEEAQLALDIKPLHAAQGGGGADHSGVAVAPMMGLMVAIHVEAGQKVAAGDRLATLESM
KMEMPVVAAIDGVVRWVGCSVGGKVERNQELFRIADEA
>gi|319763566|ref|YP_004127503.1| methylcrotonoyl-CoA carboxylase [Alicycliphilus denitrificans BC]
METKDSDVNAQAYRLLIEDLAEARQRAWLGGSESARKKHHERNRLLVRERIDLLLDEGSPFVELAELAGE
GMYDGVAPGAGIVTGVGLIQQRACMVIANDPTVKGGTYFGMTCRKHVRAQQFALQHRLPCITLVDSGGAF
LPDQANIFPDDGLFGSIFRNQVEMSAQGIAQIAVVLGACTAGGAYIPSLCDEIVIVCGKGFMFLGGPQLV
QAATGEVIDAERLGGAEMHSRVSGVTDHIAENDGQAMAIARRLVGELPPMPPPLRDRIPAQGPARPATDI
YELVSANPKKPTPTREVLRCLLDGGELTEFKAEFGPTLITGFARIGGWQVGVLANDGVLFTESAVKATHF
IDLCCKRNIPLLFLADVAGFMVGVEAEQGGIAKAGARFITAMSSAKVPKFTVITGGSYGAGNLAMCGRAF
RPNAMFMWPNGRAAIMGPEQAATTLAMVKRQNLQAKGLDWSAEEEEAFKAPIRQQYESFAAARNFARHLW
VDGILDPVETRDTLTLLLDLAARVPAESTQFGVFRM
>gi|319763567|ref|YP_004127504.1| phenylacetate--CoA ligase [Alicycliphilus denitrificans BC]
MSANPETISFSAIETQPWDVLQRGQEVLLRQQLKYLVDHSDFYQAKMQAAGVDLASVLTLADLARVPFTY
KQELRESLAAAPLLGLHRAAPMFEIVQIQASSGTTGSPAYVGLTRSDRAAWSEVTARGLFACGVRPHDLV
LHAFSMSKGFVGGIPIYQGVTQIGAIDIPIGADGGADRLLIAARDARPRCIVGTPNFLLYLAGIAKDVVG
LTASELGVERLIVGGEPGGGNPAIRAALEEAWGATCCELMGGTDLGCVYWAESDDQKGMYFVAPDHILVE
LVDPESLAPLSWTEGATGELVYTSLQRQASPVLRFRSGDHVTVTAMGGPGGRTTPAIRCFGRTDDMLIVR
GVNIFPSAVQDIVSAMAPLVGGAVRVLADFEGHTTQGNLKLLVERALGQGAEADAQTARQVEMRVRNALS
VKAEVHMVRHGFFAAPGAQKVALTLRQMPDING
>gi|319763568|ref|YP_004127505.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MQDSIEITRPAPGVGLLTISRPEKHNAIDPATDQKMAQAFAELDADAGVRCIVVTGAGNRAFCAGADIPE
LLHHIKHNMAAQRDDPQFCGITHRIATSKPVLAAINGVALGGGLEIALACDMRIASSSASFGLPEIKVGV
LAGGGGCTRLPRTIPVALAAEMILTGEPIGATRALEAGLISQVTEPDALIPRALEIAAAVASRAPKSVRA
CTALLRRARYDELQDALADERRAFADVLLSHDADEGIRAFAEKRAPRYEDH
>gi|319763569|ref|YP_004127506.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MKRKMICAALAAVGMLSLSTVQAQISDNVIRIGVMNDMSGPFSEIAGPGSVVAAKMAVEDFLRASKSGLK
VEVVSANHQNKPDVGAVTARKWFDTDGVDMIVDVPVSSVALAVNQVAREKGKAYINTGAGSPDLTGKDCS
PTTVHWLFDTWMLAHSTGRAVVKSGGDTWFFLTADYAFGHALERDTANVVKASGGKVIGSVKAPMNTPDF
SSFLLQAQASKAKVIGLANAGGDTINAVKQAAEFGIVKGGQRLAGLLIFLPDVHSLGLQRAQGLNIAESF
YWDLNDGTRAWTARFAPLNGGKYPSADHAAVYSSVLHYLKSVEAAKTDDGAKVVAKMKELPTDDPLFGKG
KVREDGRKTHPVHLFEVKKPSESTGPYDYYKKLVSIPAEEAFRPMAEGGCPLVAKK
>gi|319763570|ref|YP_004127507.1| ppic-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus denitrificans BC]
MLESIRKHTKWVMGLLFLLIIPSFILVGIDRNYFGGGSPVVARVDGKDITQADWDNAHRMESDRIRAQSP
GIDAKLLDSPQARYATLERLVRDRVLQVAAQKMHMLTSDARLARELQSIPQIAALKRPDGTLDAEAYRAL
AGAQGLTPEGLEARVRHDISVSQVMGSVVASAFAGPAESKLALDALFQRREIQVARFDPSAFVSKVAVTD
ADLEAYYKAHLAKFQQPEQATVEYVVLDLDAVKAGITLNEDDLRTYYKENLSRLSGKEERRASHILVNAA
KDAPAAEREKAKAKAQELLAEVRKAPGRFAEIARKESQDTGSAASGGDLGFFGHGAMVKPFEDAVFSLKK
GEISDVVETDFGYHVIMLTDVKTPRQPSFEELRPSLEAELRQQQAQRKFAEVAETFANTVYEQPDSLQPV
ADKLKLKIHTATGVTRTSAPGEKGALANPRLLEALFQPDSVQSKRNTEAIEIGNSTLAAARITAYQPAMT
LPLDKAREQVRSLYVADKSAEFARQEGQVRLAAWKASPDGAAGLSAPVTVSRDRPQNQPRAVVDAALRAP
TDKLPVWTGVDLAGQGYAVLKVNRIVPRDAADEATARMEREQYLQLWVSAEAQAYYELLKQRFKVQIKAP
RPAAQGETQS
>gi|319763571|ref|YP_004127508.1| histone family protein DNA-binding protein [Alicycliphilus denitrificans BC]
MNKSELIEHIASQADISKAAATRALESTIDAVKKTLKKGGTVSLVGFGTFAVGKRAARTGRNPRTGATIK
IKAAKVPKFRPGKALKDALN
>gi|319763572|ref|YP_004127509.1| cdp-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase [Alicycliphilus denitrificans BC]
MTQSLLMFFTIPTVMTWTRIVAIPLIVGVFYAPMEPATRNLIATAMFVVFAATDWLDGFLARKLNQTSAF
GAFLDPVADKFLVCASLLVLVHMQRADVFVALIIIGREIAISALREWMAQIGASKSVAVHMLGKLKTTVQ
MVAIPFLLYDGRLFDIIDTGVWGTWLIWLAAVLTVWSMVYYLQKALPEIRARVAK
>gi|319763573|ref|YP_004127510.1| excinuclease abc, c subunit [Alicycliphilus denitrificans BC]
MSATHSDELLAQVAALPPLPGVYRYFDAQGVLLYVGKARNLKKRVSSYFAKQHGGTRIGHMVGKIARLET
TVVRSEAEALLLENNLIKSLGPKYNILFRDDKSYPYLKITGVAEKDGEGDAPGQRYPRIAYYRGSVDKRH
RYFGPYPGAWAVKETIQLLQKVFRLRTCEDTVFANRTRPCLLYQIKRCTAPCVGLISPEGYAGDVRSAEA
LLRGETQELLQELERRMLAHSERLEFELAAEVRNQITALSRVLHQQAVESVSDKDVDILAVKVAGGRACV
NLAMVRGGRHLGDRAYFPVHVEDAAGVFQLEDQEEGAGAAQPDCPVEAQVLEAFMAQHYLGVPVPPTLIT
SLPVEQRLLEALSEQSGVRVTAVRQPREQRRAWLEMAQQNAEIQLARLLAEEGSQQARTRALAEALDLDA
EDLDRFTIECFDISHTAGEATQASCVVFHHHKMQGSEYRRFKIDGITGGDDYAAMRQVLTRRYSKVAEAQ
REAGGAEVSDKRARLPDLVLVDGGKGQVSMAREVFTELGLDVSRIVGVEKGEGRKVGLEELVFADGREKV
YLGRDSAALMLVAQIRDEAHRFAITGMRAARARARTGGSRLEDIPGVGPKKRARLLQRFGGVRGVADASV
EDLATVEGISHGLAEEIYRALR
>gi|319763574|ref|YP_004127511.1| hypothetical protein Alide_2896 [Alicycliphilus denitrificans BC]
MSHYTAPFEIHVHGQVQLRADVDFNQIQEALKPLWKYAGARSLADGAASAYEEEPGIQFDAKEHVLQMCW
TVSGDEDFRQSLDEMCMSLNELAEQGAAIEVTFYDTEFDEEEAPEDEDARDDFVMLFVGPTPAAIMQVQR
DLLVQDVINLMERHFDGSQLGGVVSEIDKLFSQRFDALVNSLEIGKPPRGLGGQGGSGHGGGRRPRHLH
>gi|319763575|ref|YP_004127512.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MTHGKPLPSSPAMQPPGDSSIGATLVVCLGLSQLVAWGTMHYLIAVFGRPIGQEMGWSAAFVQGGFSLAL
VVMGGASALAGRWIDAQGGRAAMMTGCWIGAAGCALLATTTGAAQYLAGWALLGLGMRLALYDAAFAALA
HLGGAASKRAMSQITLFGGLASTVFWPLGQALAQALGWRGALGVYALFLLLASGLHLAIPAARVAAHAPR
HAAPAGGPGAAPARADTLLYGLVAVLAMVMQTGISAHFIELLRGLGWSASVAVTLSALLGIGQFTGRVWV
VAWGHRYNAIRLNLLPSALLAGGYAVSLVVGTTLYGAAAFAFLYGAGNGIATITRGAMPLLLFDTASYGR
IVGAVLKPAFVLSAAAPVALAFALDGWGHAGTLWLMLATSLVLLAASAALARRHAPRRG
>gi|319763576|ref|YP_004127513.1| histone family protein nucleoid-structuring protein h-ns [Alicycliphilus denitrificans BC]
MSTYQALLEQKKALDQRIAEARKTEARQALATVHALIAEFGFTAQQVFPWKPAARKVPARYRDPVTGATW
SGRGKPPRWINGKDRAAFEI
>gi|319763577|ref|YP_004127514.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MPAPRNAPRPPKEDRHFVTALARGLEVLACFRSGDKVLGNQEIAQRCRLPKSTVSRLTYTLTRLGYLIHV
EDAGKYRLGTATLSLGSAMLVRLDVRQIARPLMQELADFAKAEVSLGTRDRFSMIYVENCRSSALLTLSL
DVGSRIALATSAMGRAWLAAVPEEVRSPALEQMRARGDKMAWGEVQAGIDKALQDYRSLGVTCSFGEWQR
NVNAIARAFHPGGGLPPMVINCGGPSFNLPPEFLLAEVRPRLIEMVVRIEAALCR
>gi|319763578|ref|YP_004127515.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MSVKQLFDLTGQVALITGGSRGLGLQMAEALGEMGARLAITARKADELAQAKAHLEGLGYEVETVVNDLS
KFDQIPAMVDQVLARFGTIDILVNNAGATWGEKAEDYPDAAWHKVMDLNVNAPFFLSREVGKRVMIPKGR
GNIIVTASVAALKGTPPGMNTIAYNTSKAAALHFARTLASEWGTYGIRVNALCPGFFPSKLASGLIDKLG
PTLVQRTPLRRIGGDEDLKGAVVFLASEASRHITGQGLVIDGGASLI
>gi|319763579|ref|YP_004127516.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDFSYSPKVVDLQKRLTAFMDEHVYPAESAYHHEVDANRKAGNPWQPTKVMEELKAKARAAGLWNLFLPE
SKYGAGLTNLEYAPLCEIMGRSHVAPEAFNCSAPDTGNMETLVRYGSEEQQRQWLLPLLEGRIRSAFAMT
EPAVASSDATNIEARIERVGDEYVINGRKWWTSGAPDPRCEILIFMGKTDPDHPSRHRQQSMILVPMKTP
GVTMERALPVFGYDHAPHGHGEVSFDNVRVPVSNVLLGEGRGFEIAQGRLGPGRIHHCMRLIGVAERALE
LMCRRALGRVAFHRPVADQGVTRERIANARILIDQARFLVLNAAYMMDTVGNKVAQKEIAMIKVAAPGMA
CQVIDWAMQVHGGGGVCDDFPLAAAYAQARTLRFADGPDEVHRNQIGKMELSRYMTAR
>gi|319763580|ref|YP_004127517.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MSDRHFAHWPHLLPRHLTVPATHLYRNIEVSAMRYPDKAALVFYDSVLSYARLQDETERLAAHLQQACGV
RKGDRVLLYMQNSPQFVIGYYAILRADAVVVPVNPMNLTEELRHYVDDAGARTILAAQDLFAQVRPLLRE
GRAAADDDAQAPGLRHAVVAAYGDYLTAPTDLPVPAFVAAPRESVDEPGAVAWCDALAAGLHPAPLAAGP
DDLAVMPYTSGTTGHPKGCMHTHRSVMYNAVAGTQWLNTQQDAVTLVVLPLFHVTAMQGGMNGSLYAGAT
IVLLPRWDRDAAAQLIGRYRVTGTQMIVTMVVDLLSNPRLGEYDFSSIRRLSGGGAAMPEAVATRLQELC
RLDYLEGYGMSETMAATHINPPQRPMKQCLGIPIFDVDARVVDPATLAELPPGEVGEIIVHGPQVMQGYW
GQPEATAAAFVTLNGKRFLRTGDLARADEHGYFYMVDRLKRMINASGFKVWPAEVEALMYAHPAIQEVCV
IAARDARRGETVKAVVVLREAFRGKVTEQEIADWAHGHMAAYKSPRLVQFVDALPKSGTGKVQWRALQDS
EATSAP
>gi|319763581|ref|YP_004127518.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MRAFPRFTRRQMTALAVAAAALAAGPALAQEVIKIGYSGPLSGGAAQYGKNVLDGMQMAVAEINAGNPEV
GGKKVRFEVVPLDDKYNPSETAINAQRLVQQHKAAAILVPHSGGIFALQTSNERNNFIVLAYSSVPQITE
RGNKLTLRIPPEFTSYIAPFSRYVMGRYGKKVAMIGADHDYGKAWAAAFKPGWEKLGGTVVAENPMSYNR
ATDFYSGVSKALAEKPDVLFVGGASEPTALVVKQARELGFKGGFVVMDQAKLDEMARVVGGYGLLEGAIG
VMPVSEDTKPENKAFIERFGKMYPGRIPGSEALWNYTAVHATFRAMQLAGSASDTKAIHAKLDAAYKALP
PEVNPGGVQGVDQRGGTVTTERGAAVRNGKVEPIQTGQ
>gi|319763582|ref|YP_004127519.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MLKFDDVSLKYGSFLALDRVSLHAGKGELVVLLGANGAGKSSLFLTASGIHRAAGGSITWEGRELVGSKP
SAIVQAGVVQCPEGRKLFPQMSVRKNLELGAYVHRRDPGPSRQTLEEVLELFPILREKQHDPAGSLSGGQ
QQMVAIGRAMMGRPRVLLLDEPSLGLAPLVIKQMFEVIQRINQAGTTVLLAEQNAYAALRIAHRAYVLES
GRIVREGLPGELLADDSIRRAYIGA
>gi|319763583|ref|YP_004127520.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MLKIDHLTKRFGGLAAVNDVSTVIEEGRINAIIGPNGAGKTTFFNLISCVHKPTSGTITFDGRDVTSLRT
DQVARLGVARTFQTTTLFDRSTVLDNLIVGHRLRTHSGLWDVLRGSSRLREEERVCREKAREALDFVGLS
RVAHRLAGDITQEERKRVAFALALSTDPRLMLLDEPAGGVNPEETEGLAELIRKIVRHGITVALIEHKMN
MIMSLADKILVLSYGEKIAEGTPEEIRRNPAVIDAYLGSEHAEV
>gi|319763584|ref|YP_004127521.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MSGFIDSRAGWGLLLAASLAFPWVAGNDYHLTVMSTAYIFAIATLGLNLITGYTGQLNLAHAGFMAAGAY
TVGILTVDHGWPFWGSLVMSGVVCMVLGYLIGVVSLRLKGHYFSIFTLCVGYIMFLVIEKWEGLTHGTVG
IMGIPAPEAIGALSFESPLALYYLVLAFLVLSVWAMQRIVKSLLGRTFIAIRNSDELAEALGINLMRNKV
LAFMLSVVYAGVAGGLYAGFVRFIGPDMAGVHHTFDMMIFAMAGGLGTVLGPLLGSIGMPWLTQYLQFLQ
EYRFIVFGPILVMLVIFMPYGVVGSVTAWRARRNARKGQQHAQD
>gi|319763585|ref|YP_004127522.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MEMLMQQVLNGLTLGGIYGLVALGLTLVYGILHVPNFAHGAFYMVGAFVAFHAMNAWGWGYWVAMLAAAA
VVAALAVVSERLVFHPLRKASGIHPMIAAIGVLLFLEAGAQALWGADFQRMPTPYTSIVEMGGITAPAQR
LLIIAAAFALMVALHLFLTRTTTGSTIIAMAQNREGASLVGIDANRVSMLTFAISGMLAAVAATLYAPIN
LVYPAMGNLVITKAFVIIILGGMGSVPGAIVGGLIIGFAESFGAFYISTDYKDIVAFVLLVVILSLRPQG
LFAKRGH
>gi|319763586|ref|YP_004127523.1| hypothetical protein Alide_2908 [Alicycliphilus denitrificans BC]
MTSKRRFLAACTLVAFGTLPAQADTYPSRPIRIIVHSSPGALLDVTTRVVAQEMSKDLGQPIVIENRPGA
DGLLGIRAVKAAPADGYTLLAAANTVAQLPAFRKEPGYDLEKDFTGIGMMNRAPFLFVGPPGQPSKTLAE
LIANAKAQPGQLVMAHAGKGTSVHMAAALFFHQTGTKFLDVPYKGAAAALPDVVGGRANVMFDGANSSGP
LVKEGKLRAFGITSTTRSPVFPDIPTLAEQGLPNYSFYVYLGLLAPANVPKDVVPRLAKALRTALASEPV
KKRFRNDAAEAGRMSPEEFTKFLKEDAARTEKVATDLGYAKE
>gi|319763587|ref|YP_004127524.1| porin gram-negative type [Alicycliphilus denitrificans BC]
MKKTIALAAGLAGMALSPAFAQSSVTLYGLMDAGLVHIDNVGGASSNQVRSGSALTSRFGLRGSEDLGGG
LSAIFNLESGIWADTGAIQGDFFQRQSWIGLRSASFGEVTAGRLLPSISDVLIGSTQAPYLGNPTATIDG
AATAGASARFNNMLGTRVSNAIKYASPSFSGFKVHALTAFGEVAGSNSAGRVLSLGGSYVSDSIEAGLVY
HETQCKDAGGCAPGKAKDKILGLGGSYKLNGARYGAVYTRQENALNVQGNDADVFTMYARVPLSPQWIVM
GGLQFQNDKSVQNYDVRQVNLGANYVLSKRTWLYALYSHQTVKNGGKAGMYSATSDSDKQNQFSTGVVHT
F
>gi|319763588|ref|YP_004127525.1| hypothetical protein Alide_2910 [Alicycliphilus denitrificans BC]
MTLSCPFFLTVKNMPLGTRADSPGALLRHPSFPRLWGVWLMANVCMWMSDVAAVWPMTSLTDSKLMVAMI
QTCTTLPVFLLALPGSAITDIVDRRSGFLAAQCWTALAAAIVFNGMAVNASLVLVLLLAGVIIAWLGGAW
VFALTATGIAPCVLLGRRYRI
>gi|319763589|ref|YP_004127526.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MQYEDFQFILFDRKPDGVLLATLNRPEAMNATNNRMHWELTQLWGVVNDDPGVKAVVVTGAGERAFSAGG
DLSVVEEMANSQEATMRVMKEASDIVYNMLACDKPIISAINGTAVGAGLAVALLADVSVIAEDARLTDGH
ARLGVSAGDHAAIIWPLLCGMAKAKYYLMTADFIDGKEAERIGLVTFCTPRSEVLPRSLAIAANLARGSQ
AAIRATKKSLNNWMRQAGPIFDNSLAMEMLCFLGPDVKEGLAALRAKRTPDFPSARLPG
>gi|319763590|ref|YP_004127527.1| aldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MTVAPPSPAEAARAQAIAWIGQAPKRLLIGGQWVDAVSGKTFETLNPATEQLLCRVAEAEQADVDAAVAA
ARKAFEAPSWSAMSPHSRTRALLRIADKVEAHIPELAAIESLDNGMPLWYATAAATACADIFRYYAGWCS
KVLGTTIPSDGSTLIYTLREPLGVCGQIIPWNVPVLMASIKFANALCCGNTVVLKPAELACLTSIRLAEL
IQETDLPPGVINVLPGFGPTAGAALAQHLGVDKIAFTGSTAVGKQVVRDATSNLKKVTLELGGKAPNVVF
ADADLDKAIATAVKTFCGNSGQVCSAGTRLFVQESIHDEVAERVASEAATWKAGDPFAADTKLGPLISAR
QRDRVWSYIGAGQESGAALRLGGKAWNGPGYFVEPTVFDNVKNGMKIAQEEIFGPVLSIIPFKDEDDAVL
QGNETTYGLSAAVWTRDVSRAHKVVKALKAGRLWINTFGEADPAMAFGGYKQSGWGREFGAESIEAYTQA
KSVMVRL
>gi|319763591|ref|YP_004127528.1| aldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MSQPTIPAFVQGTKQLLIGGQWVASSTGQHIDAINPANGELLCRIAQGNAQDVDRAVAAARKAFEGPWSR
FTAHERRKLLLKVHDAIMDNFEELALIETLDMGAPLARTRGYKEWLSQLLQFYASQTGLAGSVTGTPMSI
APNFMALKHQVPVGVVGGIIPWNGPLMGLWWIYGPALATGCTAVLKPAEDASLSSLRVSELMMEAGVPEG
VINVVTGYGKDVGQALSEHMGVDRVAFTGSVGTAQAIVRASAGNLKRLQLELGGKSPDIVLADADLDKAV
PGAAMGVFSNTGQVCVAGTRILVQRAIHDEFVQRLAAFAKTIKIGDGRESGVQIGPLISQRQLDRVMHYM
DIGGKEAQLVHGGQRLTGGELGKGFFVEPTVFANVRNDMTIAREEIFGPVASVIPFDTVEDALRLANDTP
YGLAGGVWTQNLGTAHKVSQGIRSGTVWVNCYGVIDPATGFGGTKMSGYGWKGGKEHVESFLYPKATYFN
LV
>gi|319763592|ref|YP_004127529.1| mmge/prpd family protein [Alicycliphilus denitrificans BC]
MTDSALPHCPPLEQALVRFVQDLRYEDLDAPAHAGVNRLMRDQLALQIGISQMPWSQQLLKYAAAQQRPG
ASRVAASGLTMSAQDAAFVNGSYGHGFEYDDAHGPSYSHPGSCVIPAALALGEELGATLEEVVTALVAGY
EVYTRIGLLAAPDLLQRGFHPHCVLSSFGAAAVAAKLRRLDAETTLHALAIALSHTSGTTEYTSTGGSIK
RIHAGIGTKSGMAAAEMARAGITGPRAFLSGNKGFFKTFLQRGPGDGAEARFAPGQPFQIATVWLKAYCA
CYCTHAYIDALRPFAARRTEIADVHLKITPHFNVVVGTANANAYTPRNIEHVQFSLPIQAAFALLGLGNG
YPVHRDYLAGKVDMAPVIALARGIRITEEPALEKSHPGKFVADVTVAFQDGSSQHVFVADPIGTDTNPMP
EQVQDAKFMELTEGVLGAGRARALLAALRAMDPAMKAADLTALCAAAQ
>gi|319763593|ref|YP_004127530.1| hypothetical protein Alide_2915 [Alicycliphilus denitrificans BC]
MISRRHLLQALPALPAALGPAIALAQPIAGKPIRLLVAASAGTTVDAAARFAAEPLSRIAGAPVVVENRP
GAGGAIGSEAVAKSPADGHTLLFTGVTHFSARYSGEASATYDPVKDFKAVARICSAALAVVVAADSPYKT
MADLLAAMKARPGEVDYGSGGVGSTSHLCTVILNDLTRTSAKHIPYKGNTQAVTDTVAGIVAFTCQGSGG
VLPLIKAGRLRALAVTSRNRWEALPDVPTGTECGIPGFEVASWMGAFAPAGAPDAMVALVSDGLARIARS
PEFKAFCDKQSMFVELVEHRAFQASLPAEDARWRRVAELVKRS
>gi|319763594|ref|YP_004127531.1| hydroxyacylglutathione hydrolase [Alicycliphilus denitrificans BC]
MLHLHHLVRTPAGTAVPGALAAVESRARAVVFFGPSTSAGSVAVSPIFNGTKAPGPCFAIPGADPFNLM
>gi|319763595|ref|YP_004127532.1| aldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MPQDSALLPRYEHLYINGEWVTPIDGELVESIDPATGRPWAIAPLGGARDIDRAVEAARRAFPAWSRKPG
HERAALLRRLADLFAAAIPELAVIESHDNGNLVREHRASLTAQVQWYQWFASLADKAQGTTIPIDDSVHA
FTTRVPVGVVGAIIPWNAPLLATCLKVGAALAAGCTLVVKPAESTPVSALVLARLVHEAGFPPGVFNVVP
GHGRTAGQRLVEHPDVDKVSFTGSTATARRMVRDGADNLKRFTFELGGKAPHILFADADIDNAINAATAS
AWRLTGQSCALGSRVLVERSIYDRVVEAFRERAKAVRVGLPWIDANHMGPQAHQQQLDKTLSYIQYGKED
GAELVTGGRRIDTPELAAGYFVEPTVFAGVDNGMRIARDEIFGPVASLIPFDGEDEAIAIANDTPYGLTA
GLWTRDVGRAHRVSSRIEAGMVWVNTYSFLRWSTPYGGFKASGWGRENGIDALDPYLETRTTVISTTGQF
PNLYV
>gi|319763596|ref|YP_004127533.1| alcohol dehydrogenase zinc-binding domain protein [Alicycliphilus denitrificans BC]
MRGIVFRGDRKLEILDFPDPTPGPGDAIVEMKASGMCGSDLHFYRNKPAEVLKSLGFKDLASRGMAEDTP
IIAGHEPCGQIVAVGSAVDPRVFKVGDRVTVFHYEGCNHCDHCRSGWTQMCSHGADIHGVIKHGGHAHYM
KVPVTSLVHLPEEVSYATGAAISCGTGTAWGALLRLNVTARDTLAVFGLGPVGLSAVQLAAAMGAEVIGI
DIAPDRVARAREFGAAHVIDGSKADPIEEILKLTGGLGATCSMDCAGGDVPKQQAVRCTRPWGRIALVAV
GGNLHVDGMKDVIGKQRTIVGSYTFSEPSMKDCVTFVARHGVQVDRLFTDHWKLEQAQEAYRVFDGQAGG
KGVFVF
>gi|319763597|ref|YP_004127534.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MQCFQHAIRKLATAAALAASATLAAQAQDIPVVSIQSVTGPVAFAGANYQKAIRLAVEEANAKGGVNGRK
INLMERDSASDKGQAINLAGQAADRDRAVLVLGPSATTEGVAVAPVFNDKKTPSLSFVTSDAILKPGPWM
LKFQQAPSVVSPLVAKYVLEKTPIRKVAIVYDRVNEALIEYKNHFRDPFKAGGGTVVAEEAVVSSDSNFL
PLATKLKGLDVDAVYFATYGEQSANIVLQLRQAGSGDKVRYIGTIAMVSQKFLEMTGPASEGSIAVSDYV
AGIDRPLNKSFEAAYKARWGVEPDNWAASAYSLAQVALATLKEAGPNPTRDSVREGYHKVRDVPIVGGSG
VWNQKDRVPSYGAIVLVVKGGKFVPAP
>gi|319763598|ref|YP_004127535.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MLIQQLLNGLVVGGTFAVFALGFTLLFGVNHILNMAYGSVFMWGAFAGLYAATVFHAPFIVALLVGMLAG
GVLSVLLDFVAFRPLRRRHAPEFSYILTSIGASIALVALAQKASNTAVWQFPADTFPVVIHEFLGLQVQR
LQLIIVLSALVLVGALIYALYYTGMGRRIRCVAHSEGTAQLLGINAEWVNIQVFFISGALAGFAGVLIGL
AFNSVHFLMGEPFLMRAFVIIILGGLGSIAGSLVGGVIIGVVQTLAYAYISSAAADAIAFVILFVIILIR
PTGLFGKPGAVMRVQRQ
>gi|319763599|ref|YP_004127536.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MIDYLLSYSSVLDHVLIYTLLAMSQAVVLRAGTFSIGPAAFAAIGAYTSAILAVTHGWSAPLAIASGTLL
AGVVSALMAYPLSRLRGVFQALATLALVQVMVTIAQNWDSVTNGVLGISGIPKAATTGWLLLIVALCMLL
TWTLGKFSLGRAMDVIRADETVAVSLGIRVAYHQRLAMVLSGLFAGLAGALHAFNSYAISPEEFGFHMLV
HALASSVLGGATSIWGPLVGAGVLTTLPEFVRFFADYRGVVQGALLMLIIIYLPHGIADTLRSWRYDRKV
QREVALREGTLREGAPA
>gi|319763600|ref|YP_004127537.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MSTAPTLQLDGVGKRFGGLPAVDGLSLSAPPGTITGLIGPNGAGKTTVINLIMGILKLTSGRILFNGKDV
STLEAADLARAGMARTFQNIRLVTEGTVLDNVLSGFHLHQRTGFWANLLGLPSARAEQAAHRAEAQALLE
RFGMAHLAEHRAGTLSYGHQRRIEMMRALAMRPQLLLLDEPVAGMNDTEASELGHIFSQVAASGVAILLV
EHNMRFVTQVCSHLYVTASGRLIAQGAPDAVLADPVVIEAYLGS
>gi|319763601|ref|YP_004127538.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MNHPINQSAAHALAIDRLEVHYQGITALRGVSLQIKQGEIFTLIGPNGAGKSSLVNAVTGIVPSTGSIEF
GGREFNRLPSYQRARLGVIQVPEGRRVIAPLSVLENLMLGREALGARKGDVQADLDRVFALFPILAERRQ
QLSGTLSGGQQQMLAIGRALMGHPRVLLLDEPSLGLAPVIIADVFRAIRRLNEEGMTIFLVEQNARLALE
TAHRAAVLEQGRIVKQGEADVLAHDPEVEEHYFGQAAH
>gi|319763602|ref|YP_004127539.1| electron-transferring-flavoprotein dehydrogenase [Alicycliphilus denitrificans BC]
MTNEEILSAYGPREAMEYDVVIVGGGPAGLSTAIRLKQLAAERGTDVSVVVLEKGSEPGAHILSGAIMDP
RALTELIPDWKERGAPLNQPVTDDAYIFLSETSALRVPNAFLPPFAHNHGNYIVRLGDVTKWLAEQAESL
GVEIFPGFPAAEVLYTDGSENGGVPAVRGVATGNMGLGKDGEPTENFQLGMELLGKYTIFAEGARGHLGK
QLIARYKLDDNRDPQSFGIGVKELWEIDPKKHQPGFVMHTAGWPMDSKTYGGAFLYHLEDNKVALGFVTG
LGYTNPYLSPFEEFQRWKTHPNVRWYFENDKGEITAKRLSYGARAINASGINSLPKTIFPGGALVGCDAG
YLNVSRIKGSHSAIKTGMLAAEAAYEAIQAGRQHDELTAYPKAFEASWLYTELNKDRNFKNWFKYGLATA
TLMNGFEQFVLRGHIPWTLHREKPDHAYLKPAAECKPIVYPKPDGKLTFDRLSSVFISNTNHEENQPAHL
TLKDASVPVAVNLATYAGPEARYCPAGVYEFVPDEAHAGQQRLQINAQNCVHCKTCDIKDPTQNIVWVTP
EGGGGPNYSGM
>gi|319763603|ref|YP_004127540.1| hpch/hpai aldolase [Alicycliphilus denitrificans BC]
MTASSVNHARSLLFVPATKPERFAKALDSGADCIIIDLEDAVAEGSKDGAREQLAQHLPQLTADQRARTV
VRINAAGTPWHEADLALLRQWTGQGVAVMLPKSEEPAALHGVAQVLGEGANIVALVESLAGLDALDLIAR
VPQVVRLAFGHLDFQLDLGMRASVEEPELAFARNALVAASRRARMPAPIDGVTTDTGSAERLAADARRAR
AFGFGGKLCIHPAQVAGVNEALGYSEAEQAWALRVLEEAARRGGEVFSLDGRMVDLPVIRAAEAIAASIR
K
>gi|319763604|ref|YP_004127541.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MQAPTPRKGPLSGMTVVTLEHAIAAPFCTRQLADLGARVIKVERPGVGDFARAYDHRTRGLASHFVWTNR
SKESLTLDLKQPQAQQVLGELIAGADVLVQNLAPGAAARMGLSFEALHARHPRLIVCDISGYGADGPYRD
KKAYDLLIQSEAAFLSITGTKDEPCKAGNSIADIAAGMYAYTGILSALLQRSLTGEGSHVEVSMLEALAE
WMGFPMYYAYDGQQPPGRNGAAHATIYPYGPFTAGDGKVVMLGLQNEREWKLFCDVVLRRPELAADPRFD
ANVRRTENRAALKDAIEQTFASLTAQEVIARLDEAQIANAAVNQVGDLWAHPQLHARQRFRPIGSPAGEL
QALLPPATVGSFDARMDPVPALGEHSEAILRELGRSAADIEQLRAAGVI
>gi|319763605|ref|YP_004127542.1| hypothetical protein Alide_2927 [Alicycliphilus denitrificans BC]
MSQESPESFDAWVGRTDESADQITQAPIRLMQATLDAASACALPPDLPPLWHWLYFLPGERQSNIGPDGH
PKRGGFLPPISLPRRMWAGGRLQFLRPLAVGERVRRVSLIKSVQTKDGRSGRLVFVTVQHKISDTQGAVI
HEEQDIVYRDAPAPGAPAPQPTAAPTDEQFGRTVTPDPVLLMRYSALTFNGHRIHYDRPYAMQEEGYPGL
VVHGPLIATLLMEELRRAHPGRAIRGFEFKAVSPLFDTAPFSVNGKLEGNPARLWARGPQGQLAMQASAD
IE
>gi|319763606|ref|YP_004127543.1| electron transfer flavoprotein alpha subunit [Alicycliphilus denitrificans BC]
MTALVIAEHDNATIKAATLNTVTAAAACGADVHVLVAGENAQAAAQAAAQIAGVAKVIHADGASLKDGLA
ENLAAQVLQIAGNYSHILFPATAGGKNVAPRVAAKLDVAQISDITKVISADTFERPIYAGNAIATVQSGD
SVKVITVRTTGFDAAPATGGAASVEAIAAVADSGKSRFVGSEIAKSDRPELTAAKIIVSGGRALGSAEKF
NEVITPLADKLGAAIGASRAAVDAGYAPNDLQVGQTGKIVAPQLYIACGISGAIQHLAGMKDSKVIVAIN
KDPEAPIFSVADYGLEADLFQAVPDMVKAL
>gi|319763607|ref|YP_004127544.1| electron transfer flavoprotein alpha/beta-subunit [Alicycliphilus denitrificans BC]
MKILVPVKRVVDYNVKVRVKSDGTGVDIANVKMSMNPFDEIAVEEAVRLKEKGAATEVIAVSCGVAQCQE
TLRTAMAIGADRAILVETDAELQPLAVAKLLKALVDKEQPGLIILGKQAIDDDANQTGQMLAALADLPQA
TFASKVEIAGDKANVTREIDGGLETLALSLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLESVKPEDLGVQ
VAPRLKTLKVAEPPKRGAGIKVPDVATLVAKLRNEAKVI
>gi|319763608|ref|YP_004127545.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MSALSAPDQYQEIRDAVRGLCQQFPAEYHRKIDEARGYPEEFVTALTKAGWLAALIPQEFGGPGLSMAEA
SVIMEEINRSGGNSGACHGQMYVMNTIVFSGTDAQKQKYLPRIAAGDLRVQSMGVTEPTTGSDTTKLKTT
AVKKDGRWVVNGQKVWISRVQHSDLLILLARTTPVEQVQKKSDGLSCFIVELDKAIGNGLTVRPILNMVN
HETNELFFDNLELPEDALLGTEGKGLKVIFDGLNAERTLIAAECIGDGYWFLEKARDYANERKVFGRPIG
QNQGIQFPLAESFIELEAANLMRWRACQKIDARENAGTEANMAKYLAAKASWEAANACLQTHGGFGFACE
YDVERKFRETRLYQVAPISTNMILNHVAQHTLGLPRSF
>gi|319763609|ref|YP_004127546.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MDLKQLRAFVTVAETGNVTRASALLNLVQPAVSRQLRLLEEDLGTELFERGRHGMQLTASGKTMLEYARR
ILGEVARAKAEIQPTEGPVAGIVSIGLLASTSDLLATLLATEVARRYPHIRLRLTIGYAGHLQDWLEAGD
VDAALLYGQKETPALHVKALLEESLWVVAAPAARLSRKRPVPLERVAREPFILPAAPQGLRAAIEHAATE
AGLTLQVFAETNALSVQKELVAQGHGWTILPAVGVTQEVERGLLSAAPLASPDLTRTIVLAAPSSRQATA
PVRCVVGVLLDCVKSTFEQGRWPDARWLG
>gi|319763610|ref|YP_004127547.1| mmge/prpd family protein [Alicycliphilus denitrificans BC]
MSQTIIERLAGFSAATDVARLPAEVIEECKRDVLDTLGCALAGIDHPKGRIGIEAGKRLGGTGGTATIIG
SGEKSTPHGAAFANGELANALDADSVLLPGHVSPYVLPGAFAMAEAQQRSGRELIAAVAVSHEISYRLGA
AMSGYRDTQDGKPSQSSVVGYSSTVFGATASAGKLRGLDAEKLANALGIAAATAPVNSQRAWFMHAPTAT
IKYQMAGALTNAALSAVDMGDLGHRGDLLLLDDEEHGYPRYVGTARWSPELLTAGLGEDWRFPAFQMYKP
YPHCRVMHAPLDLLIDLVARHDIKVEEIEGITSYGEGWAYELPCFTNRKILLQHDAQLCFAHGLAVAAHR
IPPGRQWQDEAVVFNPSVMALMNKVQLKTHPTYFQSISADILSRPSRVEIQARGQTFAAEKGFPKGMRSS
DPSTYMTNDELAAKFRAFVDGLLPAATIEQVIDSVLNLERVEDFGAVMRLMVRTSA
>gi|319763611|ref|YP_004127548.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MKVLEGIKVLDFGRFIAGPYCAALLADYGAEVIRIDRVEGGEDRYIVPVTEGGEGAMFLQLNRNKRSLTL
DLASPEGRDIVRKLVAGADVVVANMPPRTLKSLGLDYESLCAVRPDIILVAPNAFGTSEAVRDRVGFDGV
GQALSGAVHIAGTPGQPQKAMVPVVDFATSFACALGTVLALYERKQSGKGQEVNASLLCTGLNMASGALI
EEALLGLDRPATRNRASGYAPSDIFKARDGWFITQVIGPAMFRNWTRLVGRPELLDDPRFADDRLRGEHG
EFLSGVMSDWCSDKTLGECLALLEKARIPAGRVNSPRQALQDETVQAADLIHWMDYPGAPRQVPIFATPV
SLSRTPPEIRQRAPLNGEHTDEILAGIGLGAQEIAGLRQRNIV
>gi|319763612|ref|YP_004127549.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MDSTKIWQPGERELQKSGVVQLMRALGVPTYEELMRVSVAEPERYWNTVMRECAVQWDVQPTGYVDLSRG
PQFPSWFPGGRLNWVNTIYGWARNPATARQTAVVGEREDGSASALTYAELEARVRDFAAGLARQGVQQGD
RIGLLMENGVEATISLLAIVHLGALVVPLFSGFGVDAIVARLSAAEARMVIASTGFSRRTKRVDVQGVLR
DAWRQLPLLENVVWKRAEGEAAQDARDLDWQQVATVAQGQGQDAVVVTPDTPFMVIYTSGTTGKPKGVVH
THGSFPVKIAHDSLVHFDVHPGDVYCWPADMGWIAGTLVLGCALLRGATLVCYDGAPDYPDWSRMSRVVE
RHRVTHFGSAPTLIRGMASNEALALAGDRSTVRLLITAGEGIAPEHFNWFQQRFGDGTAPLINYTGGTEA
SGALLASVPIRPIPPSGFNTVSPGVAVDVVDPSGKSVTGEVGELAIRAPFVGMTQSFWHDDERYLETYWQ
AIPGIWVHGDLALRTPEGNFFMMGRSDDTLKVAGKRLGPAEVEEVVLELADVAEAAAIGVADAEKGQKLV
VFVVPKPAAAARAGELQAAVAAHVDKRLGRPFRPGKVHVVGQLPKTRSSKIMRRVIRSVYCGLPPGDLSS
LDNPAALDEVRAAAA
>gi|319763613|ref|YP_004127550.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MKRAAIVSPLRTPVGAFGGALKGIPVEELGATVARAIVETTGLDAARIDDVVFAQSYASGETPCTGRWVA
LQAGFPIEVAGMQLDRRCGGGVQALATAAMMVQTGAADVVMAGGVESMSNVEYYTTDMRWGKRAGTVKLH
DRLDRGRERSQPESRFGRISGMIETAETLAREYQISREEADRFAARSHQRAAAAQKAGHFDAEIVPVTVP
QRKGDPLLVKQDEGVRGDTTAESLAGMRAIMKDGIVTAGNACQQNDAAAACLVVAEDKLAELGLTPIGWI
TGWAAAGCDPARMGIGPVPAVQKLLARTGLKFDQMDLIELNEAFACQALACVKGWGSSMEALEDRLNVNG
SGISLGHPVGATGVRIMSTLLHEMQRRKARYGLETMCIGGGQGIAMVFERA
>gi|319763614|ref|YP_004127551.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MDLGLTGKVAIVTGSARGLGAATARRLAQEGAKVVITDINGELAQATAKALQDEGLAAHCIVGDITKGAD
VQRLVDETVAHFGGVHILVNNAGAPRDKYLVKMSEDDWDFVMAVMLKGAFLAAKAVMPHFIDQGWGRIIN
ISSRAHLGNPTQANYSAAKAGLIGMAKALSKEEGRYGVTCNCVAPGFMETEMVKALPTYETIKDNAIAAQ
PVKRVGQPDDIADAVAFLASERAGFISGEVLHVTGGRYG
>gi|319763615|ref|YP_004127552.1| 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-coahydratase [Alicycliphilus denitrificans BC]
MPIDPRRLLARPFPAIEHAYTQRDTQLYALGLGLGADPLDAGQLRYVYEGQDGAALRAMPTMANILAYPG
FWAREPDTGITWQKLLHAEQEIHIHAPLPAAGRVRGQTRITGLWDRGEGKGAFLQQTREISDAATGQPLA
TVKQLSLLRGDGGFGEGGSAGAPPAPHAMPEGEPDHVCDLATPAQLALIYRLSGDLNPLHADPAVAAAAG
FPRPILHGMALMGVAAHAVLRTVLGYDDTRLEGMRVRFTAPAWPGDTLRTEMWVQGGTVSLRTTALERGA
VVLNNARVDLR
>gi|319763616|ref|YP_004127553.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MIRDQETLNGLLDTIARFVRERLIPNEELVAETDEIPADIVADMKAMGLFGLTIPEKFGGLELTMEEEVL
AVFELCRASPVFRSLLGTTVGIGSQGILFDGTPEQQARYLPKLATGEMMASFALTEPEAGSDAASLRTTA
IRDGDFYVVNGTKRFITNAPQAGMFTLMARTNPANKGAGGVSAFIVEAGTPGISFGKRDKKMGQKGAHTC
DVIFENVRVPAANLIGLKEGQGFKTAMKVLEKGRIHIAAVAVAVAERMLDMALRYAAERRQFGQPIGNFQ
LVQAMLADSKAEIYAARCMVLDAARRRDDKLPNSTEASCAKMFATEMCGRVADRAVQIFGGAGYMSEYAI
ERFYRDVRLFRIYEGTTQIQQTVIAKNMLREIQ
>gi|319763617|ref|YP_004127554.1| alpha/beta hydrolase fold protein [Alicycliphilus denitrificans BC]
MTTRKPLPGTPSPMHAWIGAHGNLLCGDSWGDPSAPPVLLLHGGGQTRHSWRRTALSLARAGFHAVSFDA
RGHGDSDWVGDGGYGEAAMAEDLACVVRALGGARPVLIGASMGGITSLAAVGGGVVDAAALILADVAHVS
STDGAGRVHAFMLRHARGFASLEEAADAVAEYRGGHRRRGSLAGLGKNLRQGAGGRLYWHWDPRFLEGRS
EDWAARAERLTRCVRQVTVPTLLVRGAQSDVVTPEAVREFLALCPHASHVDVADAGHMLTGDDNDVFGQV
AIGFIRQKT
>gi|319763618|ref|YP_004127555.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MQPPPSPLPDFAAAAGGRPVVAPFARALSVLSAFAPGERWLGNGDLVERTGLPASTVTRMTRTLVTLGYL
RYAADTRRFCLSPSALTLGYRAAADTEIHRAANQRMRLFAERHQVNVHLSSRDRLDLVVIDSCRTSALPA
ALQPGIGTRLGLASSAAGWALLASLPEAERDYLLQSAEHHPPHGGREHERELAWGQLRRRSREAIGQVRA
GGFCVALGESGQPMTVVAAPIQVAGRAPLAVSCLGPASLMGRARSVRELGPALVRMAQEIQLSQGRP
>gi|319763619|ref|YP_004127556.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MSMQKQAGDSAALMTVERGLEVLRAFRSDRTPLTNTELVRRTGLPKATVSRLTSTLLQVGFLRLVPGKRE
FELSAGALGIGHAYLATNEMLQAAQPLMQELADRLDVSVALGIQDGIDMLYVGYRVSRKVATLRLGVGSV
LPMGATSIGRAYLWGLPPAQRRQLIDEHKRRAGAQGEALERAIEASFAELEARGTCAVLGGYQRGTYGVA
LPIRAGSEGVPMSLSCGRADVDLDLEAERERIAPALKETAVRLEALLSRFSGYL
>gi|319763620|ref|YP_004127557.1| mmge/prpd family protein [Alicycliphilus denitrificans BC]
MTEHTTGAPPRLAGELVADPASVELTASIAGHVARVANAPLTGADTEAARKLLLDNFIVSLWGATRPWTR
EIAQWTRRFAGTGASPVLGTDWLADPSIAALVHGTAAHSYELDDTHDEILSHPGAAIIPAALAVAAATDA
PQADLLRALAAGYEAMALLGASAGGMETVHRGFHPTSVFGSFGAATACICLHARQRGEAVTRDLLIAAWG
HALSQACGAMQFSAEPGGGEVKRVHAGYGARNGVLAAEFAHLPAVTAPRRVAEGAYGLAALFGGPLRHVA
PAQRLQIHNISFKPYACCRLFHSTIDALREVTEGFTTPPEAIERITLSGPQLIADQHMLPRPRGSMAAQY
SAPFIVGATLAYGPQRYDAYGDEHMDDAAILAIADKLRFEPSEELTRTYYPHRFATGVRLRLADGSERYA
MVADSMGTPRKPLTTEQILAKGLGLEGGAVLGERLLQGIRDGSQGGRALAQLLARSLR
>gi|319763621|ref|YP_004127558.1| hypothetical protein Alide_2944 [Alicycliphilus denitrificans BC]
MMDGPAAGAPEPAPTGEVTREELHRRSIDLRGFRRSDGLFEVEARLTDRKTHDFAPLSGGRHVAAGDTIH
DHGLRVVFGADMVIREISTDMRASPYRECLGGGDTLQAMVGVRIGPGWNGELRKRLPAGDTCTHLKEMMI
PLASAAFQLIYSVRTSNVIEVNAEGRPRKIDSCYAYGASRELVALQWPAFHRPAAAQDTKDDQGNA
>gi|319763622|ref|YP_004127559.1| hypothetical protein Alide_2945 [Alicycliphilus denitrificans BC]
MNKRAFAAALALAGLLPLAATAQSFRQPIKVIVPYAAGGGTDVLARLLGQGLSKELGQPVIIENKAGASG
QIGTQFVQAAAPNGATLLFTVDHSLITVPLTTPSAKYDAEADFTALGQAARSVWTLSIPATAPYKDFAGF
AAAAKAEAPLRSFGVPFTGGAPTLIGEALGRHWSVAMEAIPFSGSGPVIQNVMAGQVPAGITGMPEAMAV
HRSGKARVVAVSGAQRSALLPDVPTFKELGIDGLELHTFLGFFGPKNLPKEMAQEFNAALRKVLAEPAVL
DKLGSMSLQPAPTTLAEARAEVAAMERFWKKALQK
>gi|319763623|ref|YP_004127560.1| glucose-methanol-choline oxidoreductase [Alicycliphilus denitrificans BC]
MEIYDHIVVGAGSSGCVVASRLSEDPQVRVLLIEAGGAMDAFWVNTPAGMAKLFGSERFNWRFKTQPVPT
LGGRQVQWDRGKGLGGSSSINGMIYMRGQPEDYDQWARLGNTGWGWDEVLPYFKRSENNARGANAFHGGD
GPLSVTDPVEIHPAAEDFIASCVNAGIPRSRDLNSPPHPAVGVRQYTIKGGRRHTTYKAFIEPVRHRSNL
TILTGAHVLRVLFDGDEATGVEVLQGGQRRQIAAAREVILSAGALASPQLLMLSGIGGAARLQRHGIAVR
RELPGVGSNLQDHWYASLAWRCTPGSSVNHRLSGLRKYLEGARYVFTHGGYLALGAAPVTAYARSEPGAR
VDLQLSFNPMSFSATPSGEVAADGYPGMSASVVLLTPESRGHMELASSDPLAAPLFHPNYFSDESDVRRH
VAGLRQLRQIIHTPPLGQRVVEEIKPGPACASDEQLFEYLKRFGGTGWHPVGTCKMGSDGEAVVDARLRV
RGLQRLRVIDASIMPVIPTGNTNAPCIMIGEKGVDMIREDALAPRAIAA
>gi|319763624|ref|YP_004127561.1| aldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MTSQALNVPHADRFYIGGQWVEPSSDATFTVLNSATEEIVARVPQATEADADAAVQAARQAFDHGPWPRM
TPAERAVYMDRIAERLEALNDDFARIWTTESGVLYKIAQPRVGQYLSGAFRQYSAMAHTYPFIKPVKSTS
GHQGYQIQEPVGVSVAIVPWNGPAGLIAYKVAPALLAGCTVIIKSSPEAPCSGNLFAQICDEVGLPPGVV
NAITADREVSESLVRNPGVDKITFTGSTAAGRRIGAVASERVARCTLELGGKSPALVLDDYDVEAAAKLL
GTAYFSYLTGQVCASLTRIIVPRAKHDAMVDALVDAARGMVIGDPFDPATTMGPLASERQRGTVERMVAQ
GVAEGARLAVGGGRPKHLERGFFFEPTVFANVDNSSFIARNEFFGPVLSVIAADSEQHAIDMANDSIYGL
NAAVFTHDAEHAMRVARQLRSGSVGHNASRYDFAIGFGGFKQSGIGREGGEGGLEAFLESKTVVLDQMAP
>gi|319763625|ref|YP_004127562.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MTFNRLHFIRQTDLFTLRLFLSAVEEQQIGRAALRENIAASTATKRIQDFEEIAGVPLLERTPKGVVATA
AGEVIARYIRKLFADMDDMRAEITAFSEGLRGEVFVASARSIFVPYLSRELGAFARDFPQVDLVLRELEN
TTIVQAVLQGDADIGVFAIMPGLDLSGVQTHPYRTDRLVAVVPEAHALAGRASVSFEELMPENLIVISAM
HAAFAKAARKLGGEYKPKYSVRSTGVAMSLAQARLGVTVQPECDVLQARIDGVVAVPMSDSWAKRIVQIA
TPRDRHLSPAARALLEQLQSRPADAQPHA
>gi|319763626|ref|YP_004127563.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MNGPLEGLRILDLTSNFMGPYASLLLADMGADVCKIEPPEGDTTRNVGPCRHRGMGAVFLHLNRNKRSIV
LDLKHPDGLAALRRMLPRADVLLFSLRPQAMARLGLSYEAVREINPRIVYCGAFGFGQNGPYADRPAYDN
LIQAAVGLPMTQARKTGGPPTYVGTAIVDRMVGMATSNAILAALHCRSQTGYGQAVEVPMFETFAHFAMG
DHLYGHTFVPPIGDWGYERMTAPERQPYRTADGHVSVEVYTDRHWQRLFAAVGRADMAADPRYADVHARA
RHMGELYDLLHRTFATRPSAEWVALLTEADIPAIAMNTPETLLDDAHMRAVGFFGEQEHPSEGLLRTIGI
PQQWSESPATLRHPAPRLGEHTQELLGEYGFSQDEIGTLLWSHGARAAAPAETAA
>gi|319763627|ref|YP_004127564.1| hypothetical protein Alide_2950 [Alicycliphilus denitrificans BC]
MKNHAFAPARRSWMRTAGIMAAMAWGGLTLAPGASAQAWPTRPVRIVIASSAGSTGDLLARMLAPRLESI
WKQPVIVEAKPGASGIVGTEYVINAQDGHTLLLGTQTALMSKYTQKNLRFDPLTDLLPIAKVINYQMVIA
TNAPTAKRAGTLAELVALSKSTQNGLFFAGNGLTSIFNLSMAIMNQGLGLRMAAVDFPSVSAMNLALLRD
DAQVMVNTPSSVKGQIENGTVVPLAAVSTERYANLPQVLTLKEATGYSGYVPLLWAGFFAPKGTPASVVQ
KIDQDLRAVLDDKFRKQIESTFTGTTVSSSPPAFAKEIQAETAVWRDIFKAMDFKPE
>gi|319763628|ref|YP_004127565.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MSNRPVDEQVPAPHVTVRREGRVGVIELSRPDKSNALSRSAFQAIQAAMDAFEQPDSEVRAVLVCAQGKH
FSTGGDLEEAKAMMREPAVLDAFLQFVNGTLQRLEGSLLPVVAACQGLSLAGGLELALSCDVVFAASDAR
FGDQHVQYGLVPAWGGTQRLPRLLGIHRALDLMYSGRWIDASTAQQWGIVGYVVEPGTVAQEAMKYCQLL
ASRSGPGLAAMKRLSRFAVDIPLDTGLRAERLAVVQAMRDPDPAEGIAAFEARRTPLFQDR
>gi|319763629|ref|YP_004127566.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MATHTLHEKVALVTGATGGIGRGVALQLAARGARIVVNGRSAAKAQAVLDEIRALGGEACFATGDVRSRA
DMQAVVDEAVRRFGGVDIVVPNAGGNDDEARSPEVRGPFPGIDLERVTRFVGEALAAKLMVVQAAVPSMR
ARGGGSVVFVTSEGGRSPTPGQTAIAGFSGGLIAASKVLSKDLARERIRVNCVCVTVVRDTPSWTAVFGE
GSTVSDMHRKQYEKIVARCPLGVASPADIGRVVAFLASDDAAYLTGAALSPTGGLTIH
>gi|319763630|ref|YP_004127567.1| hypothetical protein Alide_2953 [Alicycliphilus denitrificans BC]
MSADFVEAIYRLIGTPSIFKEFSPRNDRAYCGSRSHF
>gi|319763631|ref|YP_004127568.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MANFLDESQQMWLDSVNRFMDNEITCEYIRKCDQNRDYPYEAYDKIAQQGWLGLLFSEEEGGAGGNIFDY
VLMAEGLGKYGFDFAAAILVPTFTAMNIAKYGTQAQKDKYIKPFIEGKIRFSVSISEPDAGSDASNTKTR
ARRDANGDWIVSGQKLWCSGAAAQDVVIAMLVRTDPDNKHGGLSVLLIPNDTPGLVINKLPTLSRHATGT
TEIFLDNVRVPGDAILGEEGQGWKIITEHLELERCSVAAAYTGNAQEAVSNAVRYAHDRVQFGKQLWDFQ
VLKHMLADRQTEVDAARLLCYRAAQMASEHKPCSREVSMAKLYASETLKQCALTGMQVLGGYANLPEADM
ERYLRESIQCTIGGGTSQIQKTIIAKSMRM
>gi|319763632|ref|YP_004127569.1| maoc domain protein dehydratase [Alicycliphilus denitrificans BC]
MSLINNQINQTFDELEEGQVFNSGGRTITETDVVNYCALTGNWIAIHSNTLYASKTRFGKRLVQGALTYS
IATGLIQFGLGIQANYGIDNMRFLKPVLIDDTVFAKATVIGKKVKDEKYGVIQFLMQVLNQDGDVVQQGE
WSLLMLRKREDLDALVASTLPAPKKA
>gi|319763633|ref|YP_004127570.1| hypothetical protein Alide_2956 [Alicycliphilus denitrificans BC]
MKTIRIGSGSGFWGDNLDPAIEIARHGNVQYLAYDFLGEPTIPLLQKMQKKNPAQGFVPSIRAVVRGVLP
ICLEKGIKILTNAGAANPQACADTILATARELGITQLKVGIVTTNDIQQKVEELLDKGVKFTNLDTGDDD
LGKVRDRIVGSYVYSGAYGYVEALQQGCDIIISDRATDDAAILAPLVHEFGWKWDEWDKLATGITAGHLI
ECGAACTGGISSLWKEVPDPWNIGYPIAEVNEKGELFITKVDGTGGLVNQITLTEHLLYEVHDPGNYLMP
EVVTDFTNVQMEQVGKDRVKVWGARGKPAPATLKAGIAYTDGYIGEVESSVTWPDAVAKARRSFEIIKKR
FEMVNLKADEVRFDMIGVDSCHWSASPEPDPEINEVRIRVAAKCADRGEAGKVARECVMLMGTGPIGSTG
QLNTPAPREVFALWPTLLAREEVKQNVEIREL
>gi|319763634|ref|YP_004127571.1| hypothetical protein Alide_2957 [Alicycliphilus denitrificans BC]
MAKLQLKDLVYARSGDKGDISNIAVIAKEPRYYPLLQKHLTAERVKEFFGEMSKGTVERYEVKTLHAMNF
VLRNSLGGGATRSLRIDFTGKTMCQAILRIVLEVDESDLHLIH
>gi|319763635|ref|YP_004127572.1| propanoyl-CoA c-acyltransferase [Alicycliphilus denitrificans BC]
MSNKARIIGVNMVKFAKPGSHEPYEVMGAKAIRGALEDAGIGYDQVQQAFAGYVYGDSACGQRTVYDVGM
SGIPVFNLTNYCASGSSALFLARQAVEAGVVECALAFGFEEMKPGALASAWSDRTLPVGWIYECQQKLAP
ELPQDAPRAIKAFGSAGWEYINRYGANPDIFAKVAVKSRNHAMNNPYALFTKPLTVEEVMGATQMYPYLT
RLMACPPTCGAAAAIVCSEAFARRHGITNAIEIAGQAMTTDTEASKTDLINLVGADMTRRAARQVYEQAG
VGPEDVDVVELHDCFTPNEVISYEGLGLCPEGGAEKFINDGDNTYGGKYVVNPSGGLMSKGHPLGATGLA
QCTELVWHLRGTAGKRQVEGARVALQHNIGLGGACVVTMYQRA
>gi|319763636|ref|YP_004127573.1| hypothetical protein Alide_2959 [Alicycliphilus denitrificans BC]
MTAIKNLSSRRDWLKAGCATLALGLAAGAAQAQQDWPTRPVRIVLAIAAGSSGDTLARMVAPKLEARWKQ
PVIVENKPGASGVVGTEHVVRATDGHTLLLGTQSSILPKYTQKGLRFDPLTDLVPVRKVLNYELVIATNG
ETAKQARTLKDLIALSKKDGKGLFLAGLGPVSVFNLSYAILNQQLGMQYSAVNYSNVNDANLSLARNDTQ
FIVNNPASIRPHFATGAIVPLAAISTQRYAGLPDVPTLAEAVGYTGYLPLLWTGFFVPKGTPAAVVDRIN
RDVQAVFAEEEFRKQVEAKLTATVAASSPETFAKEIREETAIWQDLFKTLNIQPE
>gi|319763637|ref|YP_004127574.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MAGPLTGVRILDLTSNFMGPYASLLLADMGADVCKIEAPGGDPTRGVGPCRNKGMSVIFLHLNRNKRSAV
LDLKNAQAAAALQRMLQSADVVLHSLRPKAMAKLGLAYEDVRKVNPRIIYCGAFGFGQNGPYAERPAYDD
LIQAAVGMPVLQARKSGPPQYVATAIADRLVGMAACNAVAMALYYREKTGHGQSVEVPMFETFAHFVLGD
HLYGHTFEPPIGDWGYARMMSAERRPYQTKDGYLGVNIYTDRHWQRFFLAVGRPDMAEDPRYGTIFGRTE
NIAYLYKFLADTFETRTSAEWLRILTEADIPVIQMNTPETLLRDPHMQAVNFFQMQQHPSEGLLRMMGIP
QTWSESQPEQRYPAPRLGEHTVQLLTEYGLSADEARQIVAAGGALQAPALDAHETIASSA
>gi|319763638|ref|YP_004127575.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MQHDSPSDLPLAGFTVVELSDSASAPFAGHVLAGLGAEVWKVERPGGDSARGWGPSQWKGCGAAFHAINR
GKRSICLDIKDPVQLATLHDLIERHADVFLHNLRPGSSGQYRLDPESLRARKPSLVVCEVGAYGHVGPLN
TLPGYDPLMQAFSGIMMLTGEDGQAPVRAGVSIVDFGTGMWAVIGIVSALLRRERRKIGATVNSSLLETA
IAWMSIGIANYAADGDPGGRHGSGVAFIVPHRAYEAADGYAIISAANDRLFARLAEALGHPEWGTDPKFA
TNAGRLANRQEIDGLIGQVMKRHTREYWQKHFDGFGLPCASVQTTAELYAHEQTRALGILGKTSEDEIDL
VGVPLSFDRQRPPPLDSAPEFGQDNERLQKLLQAG
>gi|319763639|ref|YP_004127576.1| hypothetical protein Alide_2962 [Alicycliphilus denitrificans BC]
MHGRMALALAALGLAEDGMHLIGSSAAEFERQVAHEIAVNRKLVQELQITAD
>gi|319763640|ref|YP_004127577.1| hypothetical protein Alide_2963 [Alicycliphilus denitrificans BC]
MRPNGHWNTRFYTRAFPYASETVALLGGNGNPGAATIGSRHIRFQHASYDHHVSLGYSPQFIAQTGVGRM
VVEMRTTWLGQASAGMGIRSNSWLVHAQGKSFSTAHRLETLSGTPIALVELCLVAVDMQSRRATHMPDFL
PAQARAGANTPENIAGSA
>gi|319763641|ref|YP_004127578.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MTKQAQGPLKGVRIVEIGGIGPAPFCCMLLADLGAEVVRIDRPAGHDGGAPIDARFDLLNRSRRSVQMDL
KKPEAVAAVLRMVAQADVLIEGFRPGVMERLGLGPDACLKANPRLVYGRMTGWGQDGPLAQAPGHDVNYI
SLTGALHAMGRAGEAPAIPLNLVGDFGGGSLYLALGVLSALLEARTSGQGQVVDAAMVDGATSLMTLIYG
LLAAGYWKDERGANRLDSGAPWYNVYETRDGRHVSIAANETRFYREALGVLGLAERELPGQHDQAGWPLM
KQRFAEVFKTRTQGEWVALAAGTQSCIVPVLSLAEAPGHDHIRQRGSFVEVDGVLQPAPAPRFSRTPGAI
QNPPPHPGQDGDAVLGDWGFSAQEQQAMRAAGAVL
>gi|319763642|ref|YP_004127579.1| hypothetical protein Alide_2966 [Alicycliphilus denitrificans BC]
MIHRRSFSIALAAAALPLAARAQDYPKQPVRGIVSNAPGTGTDITARFITKQMSQKWGVPVFVENKAGAG
GALATDYVAKAAPDGYNILFTTGAHYGLPALYEKLAFDAQADFIPVAALAQSPIVVFVPADSPFKTVQDL
IDAAKKSPNSLSYSSPGGGTSSHLAAVMMNNQADIRMLHVPYKSASQAALDVASGQVPVGFNGTGAALPL
LHAGKIRILAISSRKRSATLPQVPTLDEAGLKGYDFVVPILALVRAGTPAPIVDAIGAAATAAAAQPEFQ
ELCKAQGLDVAIQGPAEMKVSAPQEFAKWKHLVALAGAKAQN
>gi|319763643|ref|YP_004127580.1| regulatory protein lysr [Alicycliphilus denitrificans BC]
MPPPTHERSGRAGRLDLHLVATLQAVMQTGSVSRAAVALGVSQPAISQNLRKLREHFGDELFVRSGRGLQ
PTPRMLALRPVVERLLHDMEMLSRPSEGFDPQGAELEFIVCMSEFVEFTVLPRVAAEFALHAPRCRLRGV
RAHHVQLLSMLERGEADLAVGSLVGAAPSLRQQRLADHRLVCMVSAHGRWAGEPPGFQDYAEGRHVAVQR
ASDQMDPVSERLRLSGIRRNAVITVSSDFVAARTVVATDALGTVTRAVGRQLADLFPVRLQPLPFDAGTF
TSRMIWHERFQRDAGHVWLRKLVEAEYRRWVQEPQALP
>gi|319763644|ref|YP_004127581.1| mmge/prpd family protein [Alicycliphilus denitrificans BC]
METIIEQLAGFSAGTRFEELPAPVVHEVKRLVLDSIGCAFAAVEHPKGRIGIEYGRMVAGQGNAAIIGTP
HRASVLGAAIANGELINALDMDAVVPPGHVTPYVLPGALAIGETSDASGRDLIRAMAVAHEMSWRFGKAM
DYLRDMKDGQLDTPKVFGFSSTIFGATAAIGMLQRQSAETLADSLSIAGYISPVQSMMAFFHHAPSTTIK
YTMAAALVQSAMMAAHMGLLRHRGDVQLLDDAEHGYARFIGTRRWEPARITDDLGKRWGFIDEQIYKLYP
HCRILHGPLDCLIGIVEQHDIRPEEIDGIDLLVEGFVEKPTWLTQDIQHVHDGQFSIAHGMAMGAHRLKP
GRDWQDPRHVFSPSVLALMKKVRHRAHPDYVKGLSSHASARPSRVEVKARGQTFAAETLYPKGSPSPDPD
NLISTTELIAKFHHNAEGVVPRRTADAIVNAVMDLDRECDVSMLMTLTTHTSA
>gi|319763645|ref|YP_004127582.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MDMELTGRRVLVTGASQGIGEGLAKAFAAEGCHLALVARSADKLEALAAGLRAAHGVRVDVLALDMTQAG
AVEEIMAFAGDADVLVNNAGAIPGGNLWDVDAQAWRKGWELKVFGYIDLTRALYPRMKARGGGVILNNIG
NGGQNPDFNYIAGSTGNAALMAFTCALGGRSLEDGIRVVGVNPGPVATERIAKVLKSHAARLLGDEARSG
ELMAGYPLGRAATVAEVADLFVYLASPRSSYTSGTVVTVDGGITSRRSVA
>gi|319763646|ref|YP_004127583.1| NADH:flavin oxidoreductase/NADH oxidase [Alicycliphilus denitrificans BC]
MSLYKRVFSPIRIGGVEAPNRIVRTAHATRLAHRYVNDDLIAYHLERAKGGAGLSIIESTSVHPSSTFSL
SAADDGAIAPMRRLVDAIAPTGMKLFTQLWHGGYTDPAADGGLPWAVTALPGRYSVAPPIPMTTGQIGEL
VDAYGQAAARMQAAGLDGVEVLAGAGYLFSQFFSPVLNQRQDEYGGSFDNRIRALLETLRAIRAATAPGF
ALGVRLGASTDERILSTADVNAIALRAQAEGLIDFVNITHGDYYFHVERYAGMDRPVGYQLPASERVGQG
LTVPRIIVGRYATLDDAEQALKEGQADMVNIVRGMIADPMLVVKARAGRGTEVRPCIGCNQGCIGGVFTG
RMRCAVNPVVGDEARLAEDRIVPAPSPRKVLVVGGGVAGMEAARTARLMGHRVTLIEATSGLGGLLNQAR
HLPRLHLIGDIALWLEGEIYRLGVDVRLSTYVEAGEVLAENPDVVIVATGSQPTEASGFRQTADPAAGLR
IAPGARVLTSLDLCMAGAGDYGKTAIVFDDIGHYEAIGCCEALIASGAEVTYVTRHLMFAPAVEGTGRTQ
AALQRFHRSGRFRVLTQSALVSIDQGSAEVRPLYGDTPENVSADTVVLVGYRQSQNEIWQALQGRVPQLH
IVGDALSARDIQPAIREGHLAARSIA
>gi|319763647|ref|YP_004127584.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MTSEHTLAVRDLTVHYGAVPAVTGVSMEVKGGSIVSLIGANGAGKSTLIKAITGLVKVRSGEVTLGGKPL
TNRAPNVILDHGIALVPEGRRLFGGMTVRENLEMGAYRIGDAARQAELLDTCLRYFPDLKAKLASDASSL
SGGQQQMVAVARALMSAPSVLLLDEPTIGLAPAFVNVISAVVRDVNRQGVTVLLVEQNAEVALRVSHHAY
VLESGRVVKHGPSDVFLHDPDIKKAYLGL
>gi|319763648|ref|YP_004127585.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MADGKTLLSGRNLSKQFKGLLAVSGVDIDIRRGEIVGLIGPNGAGKSTTFNLLSGFLAPTTGTLTIAGAD
MTGASPERISQQGLVRTFQHGSYLPTMTVRDNVLIGALGGTRNGRVARGEQERVIAQAIALFGLSDHANA
VAKNLPHGLQRLLSMAIAFAARPQLICYDEPLTGLNQTEVAETLKVYRRLKSEHGMSMLLVEHNMRAVMA
ICDRIYVLHHGEIIFTGTPDEVKTSDAVLKAYLGEAHDL
>gi|319763649|ref|YP_004127586.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MTEHKDSIGIAAIGCVLLACVALGSGYVGSLMVWMALAAALAASLRFVLLIGELNFASAAFYGLGAYCTG
TIANTADWPFAATLALSSLLALAVSIVFGGITLKVKGPYFLLIGFAFTEAMRILYTRTEALGGNSGLVGI
FPPAWLDPYYQYFATALCFALILGMLAIERSHLGKIFVAIRDNENVVRSVGNRVFLAKVACFAIASAVAG
LVGSLHAYANNVISPLDFGFMLSTFALAYLKVGGEDSPLGPVIGAVLLVGIASWAQSMGGSEHILYGLAI
VLSVLFMPKGLMGLLERLRAGRGGR
>gi|319763650|ref|YP_004127587.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MQDNLQLLFTALQISSVYILFSLGLTIIFGVLKVVNFAHGQFFTFGALVLSLVLRALAPSLGHGWAAYLL
AGLAGLAACLFAGLVVYQFGFKRLERDMIGSFILSAGLVLLFEGIMLEVFGGAVRPVPALLEGNVRLLGL
TVSSQRLVLLAFAVLLTAAIIVLLQRTRFGKALRAVSIDHEAAMLQGVAYRQIALYGFLMATAVAAIAGM
LIAPLAAVTPTLGDSYLVKGFIAVVVGGMGSIVGAIVGSVLIALLESFVGFYFDPSLANLAIFVIVMVVL
LVRPKGFFGND
>gi|319763651|ref|YP_004127588.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MRNTFRLPATLIQAAGAAALLAMAPLCAAETIKLGLSIPLSGSGANWGKGSEWLCGRAAEEIKAQGGVKV
QGKVYNFECVGYDNKYNAAEGAKVAQALVARDGVKYVAGSIGTAPVRALQSLTERRNVLMFTSAWGTSIK
GPNFPLTFSQMNSVNEISEPMIEYVMKLHPGVKTVALLNPNDATGQETEKVAKAAWEKNGVKVLVSDWYE
RGTSEFQPIAAKLNAAKPDLIDLASTPPADAGLIFKELKAMGWNGVKVVEVGTGADGLVATGKDAVGGAY
LGAAVAVDSMNAHQKELNEGVRKVTGESINSVQIGFYDAPWAIKAAMEKAQSIDPVQVAKVMSTVRFKSF
FGETGFGGKAVYGSDQQMQLPVIITQVVGTTLKEVGRVQKK
>gi|319763652|ref|YP_004127589.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MDTLLIDEPAPQVRRLTLNRPERMNALDGPTLQALHDAARDCAAAGDAVKVLVIRGSGRAFCAGNDLKWL
AGGVLADRAAHMRHQDLMQATFECLESAPQIVLASVNGYALAGGFELALACDLIIADDAAELGDEHIRRD
LLPSGGGSQRLPRRLGLQRALLHLVTGRRMTGREAAAQGLAAQAVPSGLLESATLQLAQEIAQADALALA
SMKQMARRALELPLRDGLQYERWMQHRYRTQSGALEAGVQDFAAKN
>gi|319763653|ref|YP_004127590.1| nitroreductase [Alicycliphilus denitrificans BC]
MTAQNADVDTLRRLIFGRATCRAYLSDPVPEDVIRSIADVARGTASWCNTQPWDLVVTSGESTGRFRDAL
MEQARQHPALDSDFPFPEEYRGVYLDRRRRSGLQLYEALGIARGDKERRNAQSFENFRLFGAPHVAIVTV
PQELGTYGAVDAGGFVGTFLLSAQAHGVATTPQAALAMQSGFIRRYFGMPEGRKVVCGISFGYADTAHPV
NGYRTERAGVDDFLRLV
>gi|319763654|ref|YP_004127591.1| hypothetical protein Alide_2978 [Alicycliphilus denitrificans BC]
MMAAMPDAQAALEQAVADWNRAGAAWDAQALAAVYAEDALLFGGRPGHSVGRAAIQGYFASYDGVILAGS
MRMAETELRTLGPGCVLAQGMVHFAFTLAGGEQTRSTLRATLVLSLEPDRWRILDHHFSTVPSAPPLGKD
>gi|319763655|ref|YP_004127592.1| hypothetical protein Alide_2979 [Alicycliphilus denitrificans BC]
MMHRRTFAGALALAALAPAAFAADWPDGKTIRIVVATGVGSGSDLTARQIATGLGKELNTPVIIENKTGA
GGVIGTDFVAKAAPDGYTLLGTYAQHYTNQLVQKTPYDAIKDFEPIARIANSALVISVAANSPYKTLKDV
IEAAKQKPGFITYGSSGNGTTSHMAAALFEHMAGVKLNHVPYKAPGQVALDAAAGQIDLSFNGMSSVLPL
IKGGRLRPLAVTTPQRSQSLPDVPTVAELGHPGYEAASPIWIFAPRGTPQAIVNKLSEAVVRQAQSQGFR
DLCLNQGLEVDIQNAATAKAAGPAELEKWRKLMSVAGAKAE
>gi|319763656|ref|YP_004127593.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MAAPRSGPLAGIKVVEIAGIGPGPLAAMFLADLGATVIRVDRKEPSGLGAPRPVQFDLGLRNRRSIRVDL
KDPAAVELVMELVGQADALIEGFRPGVMERLGLGPDACLKANPRLVYGRVTGWGQDGPLSQVAGHDLNYI
SITGALHAMGRAGQAPTPPLNVLGDYAGGSLYLAFGLLAGILEARTSGQGQVVDAAMVDGVASIMTVTMG
LHAAGMMRKERGTNLLDTGAHFYEVYECADGRHLSVAPIEGKFYRLLLEKLGLQDHPLLQQQMDKACWPE
AKQVLAARFKERTRDEWTALLGHLDACVAPVLDFDEAPRHPHVKARGTLTEVAGVVQPAPGPRFSRTPAA
RPEPPAPLSTENALAALQGWLPQERIQAYQSHNTFI
>gi|319763657|ref|YP_004127594.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MSATKPLEGIRVLDLTVALAGPYGSLLLGGLGAEVIRVESPSGGDIARNNPPYVNQEGIHFGVRHADDVS
LSILNRARNKKSITLDLKSPQGKALFMQLAQECDVLIENASEGATARLGVDYESVRAANPKIIYASIKAF
GEPSPYPNLKGMDIIVQALSGIMDVTGFADGPPTRLGLPLADMIAPLYAVNGILSALIHRGRTGEGQRVQ
VSMLDCLASLVAEEHFDIYLKAGYPRRSGNFMERLTPFGVYKTRDGYVALVAFQPDWFQNLTEAIGRPEL
AQDPRFAVLGPRTRNSAEINAIIQDWLGRHTSAEAIRELQEKRGVPCAEVRTPEQVLADCHLQERGAVVP
LEHPGLAASGTQAMGMGLPIQFSESPVRFDQPAQALGAANDDIYRGLLKLSEEQLRQLREQGVI
>gi|319763658|ref|YP_004127595.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDYQLSEDQQAIVDAAEKICADFPLEYWRNKDKNHEFPHEFFEAVASGGWLGICMPEDVGGANLGVTEAA
LFMRTVAECGGQAAASTIHMNIFGLQPVVHFGTEEQKKRWLPPFARGENKACFAVTEPDTGLDTTKLKVT
AQKQPNGDYLISGKKVFISTAQVADHMLILARTTPIEEVKKHSEGLSLFYTKLDRKYVDIREIDKLGRAA
VDTNEMFIDNLPVSKDSLIGEEGKGLSYIFHGMNAERVLVAVEQVGIGRAVLKLATQYAKERIVFGRPIG
KNQGVQHPLARSWAELEAANHMIFAAASLYDKGQPCGSEANAAKLLASEACMNACQTSILTHGGFGYAKE
YHVERFMREAWIGYIAPVTPQLILSNIAERKLGLPKSY
>gi|319763659|ref|YP_004127596.1| maoc domain protein dehydratase [Alicycliphilus denitrificans BC]
MAGLYFEEFKPGMVIEHAIRRTVTETDNILFSAMTYNCAPLHIDAEYSAKTMYGQRLVNSMFLLALVAGI
TVYETTLGTTLGNLGFGEIAFPKPTFHGDTIRVETEILETRQSKSRPDTGIVTFKHVAKNQRDEIVCTAV
RTGLMMLKPADKA
>gi|319763660|ref|YP_004127597.1| citryl-CoA lyase [Alicycliphilus denitrificans BC]
MTTQMKPIRSFLFVPGNKESMLDKAAGAKADALILDLEDSVPPAEKLAARALVARKIPELIAQGQRIWVR
VNRTAHIYDLDDILAVVQPGVEGIYISKPWGPEDVHMASCMIAEAETRANLPLGSVGLIPLLETARSMQL
CFEIAQIPRVVGIVGATAKNADVGRALKYVWTAEGRESEYMKSRVVMAARAAGKQPIGGIWQQIKDLEGL
AKASAFDRQLGMSGELALHPMQVETINRTYTPTAEEVAFYQGMIDALEAAQRQGRASVMYDGEHIDIAHV
KTARDVIALAQSFN
>gi|319763661|ref|YP_004127598.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MARKQKTGSTNANETRENLLKLAARTFGTQGYSATTMRAIAEQAGIEAASIYYHFSSKEELVDEVMEQGA
GRIVQELNGRIEALGPDATAEQRFRAAVLGQMTGLVKHGDFALAHGRLLGQLPEAVRERQVKRRERHQKL
WNGLLEGLRTEGRLRGDVDIHLARIFILGSINSIQSWFNPRKGALEKIADQLCDMFFAGVSPPAS
>gi|319763662|ref|YP_004127599.1| ATP-dependent protease la [Alicycliphilus denitrificans BC]
MSGHTPLPATPLDLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEMAMDADRSIMLVAQKAAAKDEPQVSD
MFEVGCISNILQMLKLPDGTVKVLVEGQQRAQVTMVHDAETHFTATVTPVQEEAEDGKSSEIEALRRAVM
QQFDQYVKLNKKIPPEILTSIASIDDPGRLADTIAAHLPLKLENKQRVLDLADIKLRLEDLFEQLDREVD
ILNVDKRIRGRVKRQMEKSQRDFYLNEQVKAIQKELGEGEDGADIEEIEKKIKLAKMPVEARKKAEGELK
KLKLMSPMSAEATVVRNYIDVLTSLPWSKKTKIKHDLALAENVLNEDHYGLDKVKDRILEYLAVQQRVDK
VKAPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGMRDEAEIRGHRRTYIGAMPGKVLQSLGKAGTR
NPLFLLDEIDKLGTDFRGDPSSALLEVLDPEQNHKFGDHYVEVDFDLSDVMFVATSNSMNIPPALLDRME
VIRLSGYTEDEKTNIAIKYLLPKQMTNNGVKDEELRVTESAVRDIVRYYTREAGVRSLERELSKICRKVV
KGLQLKKLQAPVEVSADNLSEYLGVRKFSYGHAEKQNQVGQVVGLAWTEVGGDLLTIEVATMPGKGNITR
TGSLGDVMKESVEAARTVVRSRARLLGIRDDAFEKRDLHIHVPDGATPKDGPSAGIAMTTAIVSALTGIP
VRADVAMTGEITLRGEVTEIGGLKEKLLAALRGGIKTVLIPEANVKDLQEIPDNVKSGLEIVPVKWIDKV
LEQALERKPTPLAEDDVAPAVPVAAAREAATGSVKH
>gi|319763663|ref|YP_004127600.1| ATP-dependent clp protease, ATP-binding subunit clpx [Alicycliphilus denitrificans BC]
MADKKGSSSEKTLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDEQPTGEAAREGRGDLPTPAE
IKANLDSYVIGQEKAKRTLAVAVYNHYKRLRHKDKAGKDDVELSKSNILLIGPTGSGKTLLAQTLARQLD
VPFVMADATTLTEAGYVGEDVENIVQKLLQSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGV
QQALLKLIEGTMASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKK
QRSLTEVFQDIEPEDLIKFGLIPELVGRMPVVTALAELGEDALVQILTEPKNALVKQYSKLLAMEGVDLE
IRPAALKAIARKAIARKTGARGLRSILEQALIGTMFDLPNVSNVEKVVVDEATIEESKAPLLLYREAAKK
A
>gi|319763664|ref|YP_004127601.1| ATP-dependent clp protease, proteolytic subunit clpp [Alicycliphilus denitrificans BC]
MSALETQALGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDKDISF
YINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRFSLPNSKIMIHQVLGGARGQ
ATDIEIHARDILRTKDQMNRILAERTGQSIEKVKADTERDYFMTADEARDYGLVDQVISKRP
>gi|319763665|ref|YP_004127602.1| trigger factor [Alicycliphilus denitrificans BC]
MAVTVETLEKLERKITLSLPVTTIQSEVNARLKRLARTVKMDGFRPGKVPMSVVAQRYGYSVQYEVLNDK
VGEAFAQAANEAQLRVAGQPRITEKDGAPEGQVTFDAVFEVFPEVKIGDLATAEVDKLSAEVTEAAIDKT
LDILRKQRRTFAQRAQGAAAEDGDRVTVDFEGKIDGEPFQGGKAEDFQFLVGEGQMLKEFEDAVRGMKTG
ESKTFPLAFPEDYHGKDVAGKTADFLVTVKKIEAAHLPEVNEQLAKSLGIADGTVEGLRADIKKNLEREV
KFRLQARNKQAVMDALVAKAELDLPNASVQAEIARLLEGARAELKQRGVKDADKAEIPEDVFRPQAERRV
RLGLVIAELVRTNDLQAKPEQLKAHIDELAASYEKPEDVVRWYFSDRQRLAEVEAVVIENNVTDFVLGKA
KVNEKAVSFDELMGQA
>gi|319763666|ref|YP_004127603.1| acriflavin resistance protein [Alicycliphilus denitrificans BC]
MSQMEPRKGFNLSLWALNHAALTRYLMVVLMVLGVAAYFQLGQDEDPPFTFRAMVVRTYWPGATAQQVAE
QVTDKLERTLQEVPYADKIRSYSKPGESQIIFEIKDSSRPAEVANVWYQVRKKIGDMRYQLPGNIQGPFF
NDEFGDVFGVIYALQGEGFSYAELKDFADDVRQQLLRVKDVAKVEQFGVQDEKVWIEVSHKRLAQLGLDF
NAVLQQLGAQNAVESAGVIQSPQDMVQVRVGGQFTSVEQLRAMPIRGASGAQLRLSDIAEVRRGYVEPPS
VKVRFQGREAIGLGISMAKGGDIIALGKALRAAAAGIQARLPAGVQLHQVQDQPASVAASVNEFVKVLIE
AVVIVLGVSFVSLGLHKGGRFGWHIDYRPGLVVAITIPLVLAVTFLAMHYLGIGLHKVSLGSLIIALGLL
VDDAIIAVEMMVRKMEEGYDKVRAATFAYDVTAKPMLTGTLITAAGFLPIGIAKSVTGEYTFAIFAVTVI
ALVLSWIVSVYFVPYLGTLLLKVKPHDPDAPPHELFDTPFYNRFRATVNWCVQHRWITIGATVAIFALGI
AGMGRVQQQFFPDSSRPEIMVDLWFPEGTAFAANEAVTKRLERRLMEQDGVESVAAWVGSGTPRFYLPLD
QVFPQSNVSQFIVLAKSLPEREALRLSLPKLLAEEVPEARGRVKLLPNGPPVPYPVQFRVLGGDPATLRL
RADEVKAAMRANANLVGVNDNWNESVKVVRLEVDQDKARALGVTSQSIAQASRIMFTGTTVGQYRENDLA
LDIVLRQSPDEREAISDIANAYLPTASGRSIPLTQIARPVFTWEPGVMWRWSRDYAITVQGDLVEGLQGA
TVTAQLLPELRALEARWRAAGDNGVRIEVAGAVEESSKGSASIVAGVPVMLFIVFTLLMLQLHSFSRSVL
VFLTGPLGIAGVAAALLLLNRPFGFVALLGVIALMGMIQRNSVILIDQIELDRAAGVPTWNAIVEAAVRR
LRPIVLTAAAAVLAMIPLSRSVFWGPMAVAIMGGLVVATVLTLLALPAMYAAWFRVRRQ
>gi|319763667|ref|YP_004127604.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus denitrificans BC]
MLLLPAFVRPRSGLFLSPGRPKAKSGPLGGQRTTHCGERGGILLWVLGVSLGLLAGCSRQQPAPEPVRAV
KLLTVAASPLQMQLEYAGEVRARVESRLSFRVAGKIVQRQAELGQRVQAGQLLARLDARDYELAAQAARA
QVAAATTQRDLAAADFERFSQLKAQNFISGAELDRRQAQLKSAQAVLDQARAQLASQGNQADYTRLLADA
DGVVTGIDAEPGQVVAAGTPVVRVARDGPRDAVFYVPEDKVGQLRVGQAVQVRAWSADAPMPGKVREVAA
SADPVTRTFLVKVAVDGGDVPPLGATVYVAPQAFAHGGVQAMRLPTSSLRQEGGQTAVWVYEPGEGGGGT
VRSQVVQIATADGNEAVIAAGLAPGMQVVATGVHALAPGQKVTVYKPKSPQTPKGKAPAAMNAGASAASA
AVR
>gi|319763668|ref|YP_004127605.1| squalene synthase hpnc [Alicycliphilus denitrificans BC]
MNARPSPQPAAAPTRAAPVTHYENFPVASLLCPPRLREPITAIYAFARAADDIADEGQASPGERLADLHA
YRAELHSITAGCLPGPRWAFVFGPLQATLRSHRLPVALLDDLLDAFMQDVAMTRDGATHADRAALLDYCR
RSANPVGRLLLHLYGVHGDAALRESDAICSALQLINFWQDLSVDLPRGRHYLADADCAAYGVARADLAAL
RRTSASDRLVLDCAAWARGLMLQGAPLVHRLPGRAGWELRLVVQGGLRILDKVQALGGASLTARPRLGAP
DWLRMLARAVRM
>gi|319763669|ref|YP_004127606.1| squalene synthase hpnd [Alicycliphilus denitrificans BC]
MNPDQYVQQKAAASGSSFYYAFLFLPRQRRAAITAFYAFCREVDDVVDDVSDASVAQAKLAWWQGEVAQA
FAGRPSHPVMQALMPHVPAYGIEQGQLQAVIEGCQMDLEQTRYLDFAGLARYCHLVAGVVGEVAAHIFGQ
TDARTTAYAHKLGLAFQLTNIIRDVGEDAMRGRIYLPISELQQFDVKAHEITRREYSDRFTALMRFQAER
AHRLYDEALALLPDADRRAQKPGLMMASIYRTLLREIEADGFQVLHQRTSLTPLRKFWLAWKMQALGRM
>gi|319763670|ref|YP_004127607.1| chemotaxis sensory transducer [Alicycliphilus denitrificans BC]
MWNNLRITQRFTVVLCMFWLLGASVIGVGLWGLSSARDNLKTLHDEAMHRALLADQVADLAVQSRMQVLL
AFQHAPGSELASIHDHPVAFHLDAVLANMAKVDALQRDMEGAMEPKERALFEAAQAARAAWAAKLRQAAE
LIGKGDFSPASMAAFLAAGRAEGEAMVKALQAFRDHQVERAHGAYRAAQQRYEIGLLVFVLAILLLGVPA
SALGLLLLARLSRGFHGANAAAAAIAAGDLTHRVEHQGTDEIAAMLAQMETMRGNLGRMIGQVSDGAEMI
AGASSQVAVGTQDLSSRTEQQASALQETASATEQLSGTVQQNADSAAQASQLAASATGVAQRGGAVVSQV
VETMEAINMSSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAEAAREV
KRLITDSVAKVDVGSGQVAQAGATMQEIVTGIQRVADIVDEIAHASREQSAGLSQINHAVAHLDGVTQQN
AALVEQTSAASGALQEQARQLASLAATFRLEQRAARPVAIAAGAPAGQQALAAA
>gi|319763671|ref|YP_004127608.1| squalene-associated fad-dependent desaturase [Alicycliphilus denitrificans BC]
MKVAVIGAGWGGMAAAVRAAQAGHGVTVFEASRTPGGRARAVAATLSDGRPVVLDNGQHILVGAYAQCLG
LMRTVGVRPEEALLRLPLTLVFPDGTGLRLPDAPPPWDALMGIARARGWSACERLALLARAARWRLAGFR
CAPGASVAELCAGLPPRLLDGFIEPLCVSALNTPARQACGQTFLRVLHDSLFSGRGGSHLLLPRTDLGAL
FPEPAAQWLRARGHAVHLGRRVQSLARDGAGWRVDDEPFHAVLLSTGSAEAARLVAGAATPAAEHTGLQA
WAATAQALRFGAIATVYTEQSGAHGALLPLPMLALHHRGGRPAQFVFDRARLDGTAGLLAFVVSAFEGER
ARLEREVLAQATEDLRLPDLRVVQTVVEKRATFACTPALARPPRAIAPGLQACGDYVAGPYPATLEGAVL
HGMAAAQNVI
>gi|319763672|ref|YP_004127609.1| hypothetical protein Alide_2996 [Alicycliphilus denitrificans BC]
MHVSWQQLRSVTLAQAIEHADGERTLVSQTEWDEATRQAVEAARGRGVQRVGVADVVLDRAAAIVARAAG
RDATVAALQQPGAFTRWLARGLPLAALLLGLALDRIANAHRVDLLSPPLLAVLGWNIAIYVLLLWRAWRR
PGKERGLLAPLQHWVLRRQLPGGRAARRGLAARIAAGFYARWSALTLERFAQQAACVLHLCAAAWAAGIA
LSLLLRGLVVSYRFGWESTFLDAGQVHAIVSLLFAPLTLLFGLAPFSLADIAATQNFAGEGAAGSRWVWM
YVGLLALVVVVPRLLLAAWAGWRQARLARQCTLDVQGSGFDTLRQALPGDLVLGLLCAAPAQEQALRTLL
ALHADHGAVASAQGDRLRLVQPEGAAAATPADAVVAWGDGPVPQAPPAWRQAPVLALGSTEFGPSWVQDG
VLFERLAALLPAQRHALARLGQAWQARNEALFTQSLQALAGHLHACAALVGAGQGAARYATLLQELDATL
SDLHGHGAAALPSPMQLPPPASPTPPPQTRTGDGTALAMGTSAGAAAGAAAGAKVGALIDVGTGGMTLGV
GTALGALLGGTTAWALRTLQKKGEKKGDTDELLRHMTEAACTRYLVLSHLGRVPAQQADDLGARWHAEVT
GTVAAHWPQLTAALQAPAPPVDPLQPLLQAMLRGILQRSVARAA
>gi|319763673|ref|YP_004127610.1| ribonuclease bn [Alicycliphilus denitrificans BC]
MSLSPPLAQRIEAWIAQLSHFPWRTTAHMLRERFREDRLGLTASSLTFTTLLALVPFFTVALAVFSAFPI
FGQMQQVLQRWLVDSLVPDSISRPVLGYLTQFSAKASGLGMAGFSVLMVTALALILTIDRTLNTIWRVRR
LRPLGQRVLIYWAAITLGPLVLAASLALTTSMASAASRGLGATLPGGTRLLLDSIEFLVLAAGVAAMYRY
VPNTQVHWRYAWAGGLFVSVGMELAKKGLALYLASVPTYSVLYGTFATLPILLLWIYVAWVIVLLGAVVA
AYLPSLLAGVARPAGGQGWTFLLAVEVLQQLHGARGQSAHGLTAAQLAQMLRVDVLQLEPVLDALMGLGW
VVQVNETAAGAPGSADARHLLLADPATTAMEPLVQRLLLERTGPLERFWANTGLEVLKLADVLERPR
>gi|319763674|ref|YP_004127611.1| hypothetical protein Alide_2998 [Alicycliphilus denitrificans BC]
MHSEIVPLPPPVTTDVAATRWLAVGSLLGLIVLSLAWELWLAPLRPGGSWLALKALPLAVPLAGLLKRRM
YTYRWVSLLVWLYFTEGVVRAWSDPAPGNWLAGAEIALCLLLFTACALHVRLRQRAVRTHTSTPPTPAAD
PT
>gi|319763675|ref|YP_004127612.1| fad linked oxidase domain protein [Alicycliphilus denitrificans BC]
MTTALLDSLRQIVGAAHVLTDGDLTAYEQDWRKRVKGKALAVVRPASTAEVAAVVKACAAAGSPMVPQGG
NTGLSVGSTPDGSGTQVVLSLTRMNQVRAIDRDNLTMTVEAGCILQSLQETADKEGLLFPLSLAAEGSCT
IGGNLGTNAGGTQVVRYGNTRELCLGLEVVTPQGEVWDGLSGLRKDNTGYDLRDLFIGSEGTLGVITAAT
MKLFPQPAARLTAWAAVPSMQAAVRLLGLAHQHLGAGLTGFEVMGRFALSLVIKHMPQLRVPFAGLDGAP
PYYVLLENSDSESEEHARERFEALLEFAFEDGCVLDAVVAESLSQAHELWHIRESIPLAQAEEGLNIKHD
ISIAASRIPAFVEHTDALLQREIPGVRLVNFGHLGDGNLHYNVQAPEGGDAREFLRTQEDRVNQLVYDAV
ALFHGSFSAEHGVGVLKADKLAHYKSPVALSMMRAIKQALDPQGLMNPGCILQK
>gi|319763676|ref|YP_004127613.1| thymidylate synthase [Alicycliphilus denitrificans BC]
MTHRPIRHQYEDLMRHVFEHGVAKGDRTGTGTRSVFGHQMRFDLREGFPLVTTKKVHLKSIILELLWFLQ
GSGNARWLQERGVTIWDEWADPTSGDLGPVYGVQWRSWPTPGGGHIDQISQVVEQLRTNPDSRRIIVSAW
NVAELDKMALMPCHAFFQFYVAEGRLSCQLYQRSADIFLGVPFNIASYALLTHMLAQQCDLEVGDFIWTG
GDCHIYSNHFEQVRTQLAREPRPYPTLRIKRRPPSIFDYGYEDFEVEGYDPHPPIKAPVAV
>gi|319763677|ref|YP_004127614.1| dihydrofolate reductase [Alicycliphilus denitrificans BC]
MNNVHLIYARAANGVIGKDGAMPWHLPEDLAHFKRLTQGHPVIMGRKTWDSLPARFRPLPGRANIVVTRQ
ADWNEIGAQRASSLREALSVAEQTGSEAWIIGGAQIYAQALPLATRIEVTEIGRDFDGDAHAPQLGPEWQ
EVARSRHVGSGGLPFSFVTYERRPG
>gi|319763678|ref|YP_004127615.1| hypothetical protein Alide_3002 [Alicycliphilus denitrificans BC]
MEALARRAAAQAGQARRLLDARLAVLMAECGQPGAADGPVAAAPAARPQGALGALARELARGHGEAAPEG
AALAQRELHTLRRFRATWTRLSAEERLRQALAQVPPQAGPLNSHHLVHRALVLMRETSPEYLQRFVPYVD
ALLALDRMQAPPPPAPAPVRSRRAAASRAAVRRSRS
>gi|319763679|ref|YP_004127616.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
MTVHAGGELDDGLEPAAPVWAVFGDLMGGALGAFALILVCALGMQMELAERLKTEQRQRAEQARRLTTLE
QALAGPLAAGRVTLQDGRIGISGSVLFAFNSDELQPEGRQLLRSLSAPLAAYLRERGEILMVSGFTDDRP
MRGGGGNARFADNWELSAQRALTVTRALIDEGIPSAQVFAAAFGAEQAVASNADAEGRARNRRVEMAPMP
RPARRVQ
>gi|319763680|ref|YP_004127617.1| hypothetical protein Alide_3004 [Alicycliphilus denitrificans BC]
MTKLFSLAAFAAGLATVGWVGAGYLQAQPLALAIIVLIAAFYLLGSWELLRFSRATEALAGALGALSQPP
ARLDDWLATLPAALRDAVRQRVEGARAGLPGPVLASYLSGLLVLLGMLGTFGGMVVALNGTGAALAGADG
LDAMRDALSAPVRGLGLAFGTSVAGVAASAMLGLMTALCRRERIRAARQLDAAAAGPLRPFSSQHQREAS
LRLLEQQAGAMPQVVDRLQDCMAALERQQQALGERLAAEQRRFYSETEAAYTALAATVQRTLADTAAQSA
AQAGAAIQPATEATLAALARESTRLQESMAQQVGRQLDAMAERFGEATIAVSTQWTSALAEHRSTGEATA
QALGDALARFTQGFEQRTTELATGLAQQLLHQSEAQAARWDEALARQASEGAQLAERQQQALQAATDGLA
RHAAALQVSVDQAHEGLQTRLAAQEEQRLARWTQALQSVAATLVDEWRQAGAQAAAQHQQTGDALARAAD
DIARHMQAQAQGTLDEVQRLVHAAAEAPRAAAQAMGELRQQITDSIARDNAMLDERARLLETLSTLLGAA
GRAADEQRSAIDALVAQAAGAMERAGGRFAETLDTQAGRLEGAAAQVAAGAIEVASLGEAFGGAVQLFGQ
ASEQMLAQLQRIEAAMDKSLARSDEQLDYYVAQAREVIELSVGAQKQIIDGLQQVAAQRAEESAA
>gi|319763681|ref|YP_004127618.1| hypothetical protein Alide_3005 [Alicycliphilus denitrificans BC]
MAQHTGRAGLTGTALVRLLAGMGDAPQRAGEPCAAFADGLVQWVGWTDAIALSAALERPAASTVNPQNRY
AGEHAEYERVRATLAQAIGRESQAAGRSPLEAGMGFAPYRQCYVARQQAMGVALAALRERVRAALAACGP
DAARLAAVDAVLAQALAVQEQRVFAAVPARLEKHFQRLCAAEAGPDAFRADLQAVLLAELELRLQPVEGL
LEALRRHTPSGCT
>gi|319763682|ref|YP_004127619.1| transposase is4 family protein [Alicycliphilus denitrificans BC]
MSTKIHLANDGQGRPLRLILTPGQVNDITQAPELLRGFAPTHVLADKGYDSRALVAQIEACGAQAVIPPR
SCQQARPFDAKLYRARNAIERCFGRLKQYRRIATRYDRKDAHFMAFLCLAASLTWVPD
>gi|319763683|ref|YP_004127620.1| transposase-related protein [Alicycliphilus denitrificans BC]
MTRPSRYELTDAQWQRLEELLPGKAGDPGRSGVDNRNFVNGVLWVLRSGARWSDLPERYGKYKTVHKRFT
RWAAAGVWEQVFAMLVKDRGNAYLLIDSTIVRAHQQAATGKGGPRLRLWGVPEVV
>gi|319763684|ref|YP_004127621.1| response regulator receiver [Alicycliphilus denitrificans BC]
MTHPPGGPAARVLVIDDEPQIRKFIDISLRSQGYATLLAETGLQGLALLASQGADIVVLDLGLPDRDGKE
VLEELRQWSRVPVIVLTVRSGEEEKVALLDAGANDYVTKPFGIGELMARIRAFLRTTALSGEEGPVYDDG
TLCIDLARRKVHLRGQAVALTRKEFALLALLARQPGRLVTQTQLLREMWGPTHQEDAHYLRVLVGKLRHK
LGDDASAPRYIVTEPGVGLRFVAQER
>gi|319763685|ref|YP_004127622.1| osmosensitive k channel his kinase sensor [Alicycliphilus denitrificans BC]
MGAENTQQADALVGELRRQAAGRLTVFLGAAPGVGKTYAMLARARELHRQGIDVVIGIVETHGRAETMAL
VEGLPQVPRRQVGYQGRMLDEMDLDGLLARRPAIALVDELAHRNAPGSRHERRWQDVQELLDAGIDVYTT
VNVQHLESLNDVVHQITGIRVSETVPDAVFERLRDIRLVDLPARELIERLNQGKVYLPEQAAQALQAFFS
PSNLTALRELAMQTVAEHVDADLRETRTARGLADIAIQRHVLVAIDGRGQSEYLVRAGARIAERRGAPWS
VVSVDTGRSAGAALHAEDLERAAPGQARHSAAHAEQQRQRELDQAFALARSLGGETEALHNTDVTQALLD
AAAARGARSIVIGRTRERPVARIFNRTLTQQLLQRGARYELTIVSTPQARQRALRLQGLAGERLARGEPA
LIALATLGATAAAALAERFVGLEDLSTVFLIAVLLVASRTRMVAAAITAVLCFLAYDFLFIEPRFTFLIS
AQRGVATVLLFLAAALIAGRLASRLRMQVIALRAANTHATAMQNLARQLSKAADLGQVITASASVLQSTL
NAQAWIRINGESGPAAAAQHLDEKDKAAAEWSQQHGQPSGRYTDTLAHCAWWFLPVHSDRETLGVVGLRF
PAGMGRLPFEQRRLAESMTEDIGQAALRARLVSELEAARVTGETERLRSALLSSVSHDLRSPLSSMIGAA
DSLARYGQDMGAQDRGSLLETIRVEGERLDRYIQNLLDMTRLGQQGLALSRDWIGVDELVGSAVRRLQRY
EPAVKVESSIDAGIGPVHVHPALIEQAIFNVLENAAKFSPPGEPIRVQALREEGGLLRIDISDRGPGIPE
DERRRIFDMFYSVERGDRGKQGTGLGLTIVQGIVGAHMGRVEALPGPDGRGTTIRLTLPLGEPLPAQEG
>gi|319763686|ref|YP_004127623.1| potassium-transporting atpase, c subunit [Alicycliphilus denitrificans BC]
MANILPVSPARASSGTAPLADRGALRGAVVLAVVTLAGFGFLYSLAGVGIGQALFPQAADGSLVERGSRI
VGSALVAQPFAGERYFQPRPSAAGYDTMALTGSNQARTNPDLRKRLEEARAAVAMREGVAPSAVPGDLYT
QSGSGIDPHVSPQGAAIQVARVARARGLARDAVERLVAGHTEGRQFGIFGAPRVNVLALNLALDALAASK
>gi|319763687|ref|YP_004127624.1| k+-transporting atpase, b subunit [Alicycliphilus denitrificans BC]
MSTTHAASSTRVGSSLKPALIGSFAKLAPRHAIQNPVMAVVWLGTVLTAVATIAGWTSTGFGWAVTAILF
VTVLFANFAEAVAEARGRGQAASLRRARKDLVARRLDKAGRENTVPAAELRPGDLVVVAEGQLVPADGEI
VEGLATINEAAVTGESAPVLREAGTDRSGVIGGTKVLSDRIVVRVTAESGHSFLDRMIALVEGSVRQKTP
NEIALGILLAVMTLSFLIVVATLPFIGGFVGVRVDVVLLVALLVCLIPTTIGGLLPAIGIAGMNRALRAN
VLAKSGKAVEVAGDVDVLLLDKTGTITYGDRQATAFHPLAGVNAAQLRQAALLASLADPTPEGKSIVRLA
REKGEKLVDPEQAHFVPFTAQTRMSGVDLPAGRVIRKGAMDAIVRHVAALEGHAPAELEARVHEVARKGA
TPLVVSDGRHVLGVVELSDVIKRGIKERFARLREMGVKTVMITGDNPLTAASIAADAGVDDYIAEARPED
KLARIRAEQAGGRLVAMVGDGTNDAPALAQADVGLAMNSGTQAAKEAGNMVDLDSDPAKLLAVVEIGKQQ
LITRGALTTFSLANDVSKYFAILPALFAASVPQMAALDVMRLSSPASAVLSALVFNALIIPALIPLALRG
VRFRPASATELLRNNMLVYGVGGVLLPFIGIKLIDIVLSAMFNL
>gi|319763688|ref|YP_004127625.1| potassium-transporting atpase, a subunit [Alicycliphilus denitrificans BC]
MVEPLLLLALLVVLGWPLGHYLAAVMRGDPMRSDVLFRWIERPLYALLGTRPEVGMGWCGYAKAFLLSNL
VLALVVWAIFMTQAWLPLNPDGVPNMGWDLALHTVVSFLTNTNQQHYAGQAQLSYLSQMTGIVGLQVVTP
VMGLAVAAATLRGLFGGRQPQAQGQPVDVGNYWADVVRATLRFVLPLCLILSALLTWQGVPATLAGGPVA
APVEAGAQFNVQKIPLGPVAPMVAIKQLGSNGGGWYGPNSAVPLENPTPLSNFLQTLAICLIPVSIVFMV
GPFTGRRRFGAMVFGTMLAMSVLSTGLAVWSEGHSAIAADIALMEGKEVRLGSDASALWAAVTTQVNNGS
VNSMLDSAAPLTGMVAMADMLINAVWGGVGCGLQQFIVYLLLSVFLAGLMTGRTPELFGRKIEGPEVRLL
AVLVLLQPLVVLGFTAVALAVPGLAGNSNPGFHGISQVFYEYVSAFANNGSGFEGLGDATVWWNLSCAIV
LAAGRFPALVIPLAIAAMLAAKRRAPEGAGTLQVETPTFALVLIGIVIILTLLQFMPVLVLGPVADHLAL
ASLLAR
>gi|319763689|ref|YP_004127626.1| hypothetical protein Alide_3013 [Alicycliphilus denitrificans BC]
MSTLARDLESPTIHKLTELCEMMEVHPLTLLALAYTENDPAKTDQLLARVSKEPGAIADMAGQTRPDLEE
TCLSQPGSHGCFPDPKITQNHLKSIT
>gi|319763690|ref|YP_004127627.1| exodeoxyribonuclease iii xth [Alicycliphilus denitrificans BC]
MHLATWNINSLSVRLPQVLAWLAANPVDAIGLQELKLVDEKFPHDAFEAAGYHAVCFGQKTYNGVAIVSR
TPPRDVVRNIPGHDDEQARVIAATLDVEGGPLRLVNCYFVNGQAPGTDKFAYKLQWLAALHDWLRAELAA
HPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERQHFRQLLELGLTDAFRMFEQPEKSYSWWDYRQLG
FQKNRGLRIDHILVSEALRAGVTACRIDRAPRKNPQPSDHAPVVATLG
>gi|319763691|ref|YP_004127628.1| nitrogen regulation protein nr(i) [Alicycliphilus denitrificans BC]
MKPIWIVDDDPSIRFVLERALAREGLPTRSFTQAREVLDALAGVAAGGAAQQGPQVLVSDIRMPGDSGLQ
LLEQVRAQLPGLPVIVMTAYSDLDSAVSAFQGGAFEYLPKPFDVPKAVELIRRAVEESEREQVAEQQQAD
APEMLGQAPAMQDVFRAIGRLSQSVVTVLVTGESGSGKELVARALHKHSPVAGGPFVAINTAAIPKDLLE
SELFGHERGAFTGAQTQRRGRFEQAEGGTLFLDEIGDMPFDLQTRLLRVLSDGQFYRVGGHAAVKSHVRV
IAATHQDLEQRVRDGAFREDLFHRLNVIRLRLPALRERREDVPMLTRHFLQRSARQLGVEPKRISDAALE
TLMRFAFPGNVRQLENICHWLTVMAPAQVISARDLPPEVLQAGAPVHAPAAAADEGWELALEREAQRLLQ
DGRPEVWEALARRFESRLIRTALQATHGRRMEAAQRLGIGRNTITRKIQELGLDAPDEV
>gi|319763692|ref|YP_004127629.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MISAPRPAERYQALDLISTLVAVLHPDGAVVFVNAALEDALGLSRRMLEGTDFGALLTDPAILRKALAGA
RGRDFAALRFEAALRRPPQEPLPVHANVARAEPGSEVIVELWPLEAQARQDREERLREQAQAHKELIRNL
AHEIKNPLGGIRGAAQLLQMELPGPELAEYTQVIIHEADRLQGLVDRLLAPHRHPHQVGDVNIHEVCERV
RSLVLAEYPQGLAVLRDYDTSIPEFRGDRAQLLQALLNIVQNAAQALAERIAAGDAQITLRTRVARQVTF
GRQRYRLALELHVIDNGPGVPEAIRERIFYPLVTGRDGGSGLGLTLAQTFVQRHQGLIDCDSEPGRTDFR
ILIPLP
>gi|319763693|ref|YP_004127630.1| hypothetical protein Alide_3017 [Alicycliphilus denitrificans BC]
MKHSLFALTVIAAMLQPAWAQDRIYRCGNEYTNNAAQAKERGCKLVEGGNVTVLQAPRPAAAAPSGGAGA
GSPPANAPRVDAADQRARDADARAILEAELRKAEARLAELRKEYNDGYPQRSALEMRNPQGYIERTAELK
SAVSRAEADVAGIKRELARLNK
>gi|319763694|ref|YP_004127631.1| glutamine synthetase, type i [Alicycliphilus denitrificans BC]
MAKTVADVMKMVEENEVKFVDLRFTDTRGKEQHVTVPVSHFDEDKFTSGHAFDGSSVAGWKGIEASDMQL
MPDPSTANIDPFFEETTLFLQCDVVEPGDGKAYDRDPRSIAKRAEAYLKASGLGDTAYFGPEPEFFIFDG
VRWSNEPGKVFFEIEEYEAPWNSGTKFDGGNRGHRPTTKGGYFPVPPVDSTQDMRAEMVLILEQLGIPVE
VFHHEVAGAGQNEIGTKFSTLVERADWTQVMKYVIWNVANAYGKTATFMPKPYAGDNGSGMHVHQSIWKD
GKNLFAGDGYAGLSDFALYYIGGIIKHARALNAITNPGTNSYKRLVPGFEAPVKLAYSSRNRSASIRIPY
VANPKGRRIEARFPDPSSNPYLCFSALMMAGLDGVENKIHPGEAATKDLYHLPPEEDKLVPTVCHSLDQA
LEALDKDRGFLTKGGVFSDNMLDAYIELKMGEVQRFRMAPHPVEYDMYYSL
>gi|319763695|ref|YP_004127632.1| molybdopterin binding domain protein [Alicycliphilus denitrificans BC]
MIPSFGLIIVGDEILSGKRADKHLPKVIELLAARGLALAYADYVGDDRPRITAALQRAFASGDVVFSCGG
IGATPDDHTRQCAAAALQRPLALHPEAAALIRERMQDVAREQGEAFDPDRPDNVHRLNMGVFPEGARIIP
NPYNKIPGFSCDGPGGGTVHFMPGFPVMAWPMVEWALDHYCAQWFNRQPQTEHSIVLYGAMEAALTPLME
RIETAHPGIKVFSLPSVDHPVHGRHVELGVKGPTALIPAAWRELYQILHQYGANMGPEMVRNI
>gi|319763696|ref|YP_004127633.1| transmembrane protein [Alicycliphilus denitrificans BC]
MGPFLDSFWRAAAYCLMPRVVALSLLPLLLITLAAWGGGHFYWQPAVAWMQAALEGSSWLGLLWGWLGHF
GVDNLPVVLAPLLVLMLATPVVVIVCVLAVAVLMAPAIVSLVAERRFAELQRKRGGSFLVSVLWSLGSTI
AALLALVVSMPLWLVPPLVLVLPPLIWGWLTYRVMAFDALAEHASRPERQEIFKRYRLSLLTIGVLCGFL
GAAPGIVWASGVVFAAAFFVLVPIAIWIYTLVFAFSSLWFTHFCLAALQRLREQGGGDPSAPLAAPAIPA
SPPPALAPPPSPDSHPA
>gi|319763697|ref|YP_004127634.1| fatty acid hydroxylase [Alicycliphilus denitrificans BC]
MLGVDERDAMVNSMSLPSQLFDAAQQWLFEAVVQPALFALGLANVLEDAYVATGWLLVGLLQLLVMLALI
GPLERWRPVEPLQDRAAVRVDVIYTLIHRLGLFRLALFFMAEPLWDGLFGMLRTHGWRTFQLDALWPGVT
DQPLASLLLYLLVFDFVDYWIHRGQHRFGWWWRLHALHHSQRQMTMWSDSRNHLLDDLLRDAIIVVVAQC
IGVAPGQFVAIVALTQLSENLHHANLRLWFGRLGERLWVSPRFHRLHHAIGTGHESAPAQRTGAPVLGGH
NFGVLLPWWDMLFGTANFECRYDPTGVRDQVEPGPDGRVRDYGRGFWAQQWRGLLRLAGRG
>gi|319763698|ref|YP_004127635.1| polysaccharide deacetylase [Alicycliphilus denitrificans BC]
MQSLRGVLRAIFLIAASASPLGASAQNNAQGSCNGTVYLTFDTGHMGVAPLVAEVLQRQRVQVTFFAADE
RTQSGGSSLDEQWAPWWRARAAEGHEFASHTLHHVYWRADEGAGLKVRPSTGPQAGKDLSMTAEQYCAEI
DGAANRLRAMTGKEPLPLFRAPGGKTSPRLLEAAQSCGYMHVGWTPAGFLGDELPSERYANRMLLEQALR
TIRDGDILLAHLGIWSRKDPWAPAVLEPLIKGLKERGLCFRTLREHPVYGTKALNRK
>gi|319763699|ref|YP_004127636.1| hypothetical protein Alide_3023 [Alicycliphilus denitrificans BC]
MGRMAGVLVAACLALGAQAAEPPVFVLNSLQADISVIDPVTWTETARIATGKEPHHLYLTPDEKSLIVAN
ALGDSLTFVDPGTAQVQRTVRGIVDPYHLRFSPDMQWLVTAANRLNHVDFYRWDGKEPTLVQRVATGKTP
SHLWIDSASRTVYSTMQDSDELVAIDIATQKIKWRTGTGAMPADVYGSPDGRNLFVGLTGSDSVEVFDIS
GEQPRSVQRIKTGSGAHAFRAAGDGRHLFVSNRVANTISKIDMQALRVVDSYPAPGGPDCMDVSADGRWI
YVSARWARKMLVIDTVERKVARAINVGKSPHGVWTLRHAKR
>gi|319763700|ref|YP_004127637.1| pseudouridine synthase [Alicycliphilus denitrificans BC]
MQLQDILYSQGFGTRRICAGLIQQGWVAVHSAGSLEPVVCLEPAQNLKEQGLVLRVQGQDWPYHAKAYVM
LNKPAGTECSQKPSAYPSVYTLLPAPLRQRPGKSAVSGVQAVGRLDQDTTGLLLLSDDGQFIHRMSSPKK
HVPKVYQVTVRHPVDAAQVECLLAGVVLDDDPKPVRAVACVQRDAHRIDLTLTEGKYHQVKRMIAAVGNR
VEALHRARIGGLELPADMAPGQWRWLGLDELALLK
>gi|319763701|ref|YP_004127638.1| phosphoribosyltransferase [Alicycliphilus denitrificans BC]
MLTEDGKHLYVSYDEYHSLIEKLALKVHQSGWEFDTILCLARGGLRPGDILSRIFDKPLAIMSTSSYRAE
AGTVQGHLDLARFITTPKGEIAGRVLLVDDLADSGHTLNAVVRMLRTNYTPITELRSAVIWTKGMSAFTP
DYSVEFLPTNPWIHQPFEGYDSLTPDKLVEKWRW
>gi|319763702|ref|YP_004127639.1| adenylosuccinate synthetase [Alicycliphilus denitrificans BC]
MKASKGRNVVVVGTQWGDEGKGKLVDWLTESAQGVVRFQGGHNAGHTLVINGVKTALHLIPSGIMRPGVK
CYIGNGVVLSAAKLFEEIEGLEKAGVEVRSRLRISEACPLILPFHAALDVAREAAREHGGAEKIGTTGRG
IGPAYEDKVARRALRVQDLKYPERFAAKLRELLALHNHVLTTFLGSGSFQFSDALKPYIKDGQVQFEPVF
AEAMRHAEMLKPMMADVSRELNEAHAVGANLLFEGAQGTLLDVDHGTYPYVTSSNCVAGNAAAGSGVGPG
QLHYILGITKAYCTRVGGGPFPTELDWETPGTPGYHMSTVGAEKGVTTGRSRRCGWFDAALLKRSAQVNG
LSGLCITKLDVLDGLPELLLCVGYELDGERLDLLPMGAEEIARCQPIYEKMGGWTQSTVGVTRYDDLPAN
ARLYLERIEQVTGVPIAMVSTSPDRDHTILMHNPYAVA
>gi|319763703|ref|YP_004127640.1| histidyl-tRNA synthetase 2 [Alicycliphilus denitrificans BC]
MSAWVLPDHIADVLPSEARHIEELRRGLLDTARSYGYELVMPPLLEHLDSLLTGTGEALDLQTFKLVDQL
SGRSLGLRADTTQQVARIDAHLLNRRGVTRLCYCGPVLHTRPDRPHATREPLQFGAEIYGHPGIEADIEA
VLLSLECLRSANVQDVSVDLADVRIVRSLLAGLPVGLQTLARVHAALAAKDASELTFLARDFPANAREGL
LALLQLYGDASVLDEAEIALKSISGVRQVLSDLRAIAARVQSARVTFDLADLRGYAYYSGARFAVYAQGA
SDALVRGGRYDEVGAVFGRNRPAAGFSLDVKQLVGVVSPRPLKAAIRAPWGEAPDVNAAIAALRQQGETV
VCMLPGHGSEVDEFHCDRELVQVGGRWVVRAL
>gi|319763704|ref|YP_004127641.1| hypothetical protein Alide_3028 [Alicycliphilus denitrificans BC]
MDWEASFWAALGLVLVIEGLFPFVSPAGWRRMFMQILQLRDGQIRFCALLSIVAGGLVLLLL
>gi|319763705|ref|YP_004127642.1| hflc protein [Alicycliphilus denitrificans BC]
MNRIGFIASTFLVLLALASSMMFVVDQRQFGVVYALGQIKDVLTEPGLYFKLPPPFQNVRYIDKRLLTLD
SSDTESMLTAEKQRVVIDWYVRWRISDPSEYIRNVGLDENAGALQLNRVVRNAFQEEVNRRTVKELLSVK
RDALMSDVKREVLEAVRGAKPWGVDVVDVRITRVDYVEAITESVYRRMEAERKRVANELRSTGAAEGEKI
RADADRQREIIIANAYRDAQKVKGEGDAETSRLYAQAFGRDPQFAQFYRSLEAYKASFNRKGDLVVLDPS
STEFFKAFRGAGVGTAAPASPRKP
>gi|319763706|ref|YP_004127643.1| hflk protein [Alicycliphilus denitrificans BC]
MNLHNRASRWALLPERIRGMFNLNDPRWGRGDDKGEGGQRPEPERPSTDQPQGGGRGRGQNSAGQPPDLD
ELWQDLNRKLGGLFGGRNGGGRGPTPGGGNGGGFQPDMKNAGVGVGLIAVIAVLIWLGTGFFIVQEGQQA
VITQFGKYKSTVNAGFNWRLPYPIQRHELVFVTQIRSVDVGRDTIIKSTGLRESAMLTEDENIVEIKFAV
QYRLNDARAWLFESRNPADAVVQVAETAVREVVGKMRMDTALAEERDQIAPRVRNLMQTILDRYKIGVEV
VGINLQQGGVRPPEQVQAAFDDVLKAGQERERAKNEAQAYANDVVPRAAGTASRLAEEAAAYKARVVAQA
QGDTQRFSDILTEYQKAQQVTRDRMYIETMQQIYSNVTKVLVESRQGSNLLYLPLDKIMQGVSQTPPAAV
HEAPPAAGSGSVPPASSSQFQGDTRSRDASRSRERESR
>gi|319763707|ref|YP_004127644.1| gtp-binding proten hflx [Alicycliphilus denitrificans BC]
MSSNPSSDTDFTPVLLVGVDFGLPHFDAELQELGLLAQTAGLKPVARLTCKRKAPDAALFVGSGKAGEIQ
TLAQMHGAKEVLFDQALSPAQQRNLERHLQMPVNDRTLLILEIFAQRARSHEGKLQVELARLQYLSTRLV
RRWSHLERQRGGIGTRGGPGETQIELDRRMIGEAIKRTRERLVKVKRQRATQRRQRERRDTFNISLVGYT
NAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLGEAVGSVSLSDTVGFIRDLPHGLVDAFQATLQEAV
DADLLLHVVDAANPGYPEQIAQVQLVLAEIGAAEIPQLLVFNKFDAMPAETRPARLQDMYELDGRQVPRI
FVSARQGEGIPALRELLAHMVQEAAARDMTPGETAELPGPPG
>gi|319763708|ref|YP_004127645.1| RNA chaperone hfq [Alicycliphilus denitrificans BC]
MTVVRCRFTTTFLNTENIVSNKGQLLQDPFLNALRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVT
QMVYKHAISTIVPGRAVNFSTAEAAEGDNQ
>gi|319763709|ref|YP_004127646.1| ribosome-associated gtpase enga [Alicycliphilus denitrificans BC]
MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGRQGKHEFIVIDTGGFEPDASSGIYR
EMAKQTQQAVAEADVVIFVVDVRGGLSAQDHDIAKYLRRLGKPCVLAGNKAEGMQDSAHLAEFYELGLGE
VHPVSAAHGQGVRSLVELALKSLALPEAGEGDVVAEANVIRLAVAGRPNVGKSTLINTWLGEERLVAFDM
PGTTRDAISVPFERNGQKFELIDTAGLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDA
HIAGYILESGRAVVIAVNKWDAVDDYGRQQLERSIETRLSFLKFAPLHFISAMKRQGIGPLWASIVQAYK
SANRKMPTPVLTRLLQEAVQFQSPKRSGMFRPKLRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFLEGRFR
KEFDLIGTPLRIELKSSSNPYADKHES
>gi|319763710|ref|YP_004127647.1| outer membrane assembly lipoprotein yfgl [Alicycliphilus denitrificans BC]
MSAARRSCRALWGALALAGLLGVSGCSLWGGSSKPKPAELGPNVPVLGVRQAWTARIGAVEGVALDVHVN
GNVVTLASANGEVAAIDARTGGDVWRTQLNMQLASGVGSDGRWSAVVSRNAQVVVLDGAREIWRKSLPAQ
AYTAPLVAGHRVFVLAADRSITAFDAATGYQLWRQQRPGEPLILREGGVLMAVGDTLVAGLSGRLVGFNP
DNGVVRWEAPLASPRGTNDVERLVEIVGRTSRVGDSVCARAFQATVGCIDAGRGTVLWTQPASGSEGIDG
DGSMLFGTESNGTVAAWRRADGVRAWTSERLQFRKLTAPLLLGRSVVIGDDSGLVHLLSREDAAPLNRLT
TDGSAIAASPVAAGDTLVVVTRKGGVYGFRPD
>gi|319763711|ref|YP_004127648.1| hypothetical protein Alide_3035 [Alicycliphilus denitrificans BC]
MANNFDLQEQEQLDELKHFWNTWGTPITWVLIIVLGGFAAWNGYQLWQSRQAQQATALVEAVELAAQSGD
LARVEQAFGDLKSGYGGTIQAGQAGLLAAKALADAGKWDAAKGVLAWVAEKASDEGYMALARLRLAGVLI
EEKAYDEALAQLSARFPSEFAGTVADRKGDVLALQDKKQEAIAEYRRAYQALDAGIEYRRLVEAKLNALG
AQAEAVASAAPAGGAQ
>gi|319763712|ref|YP_004127649.1| histidyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MQKLVAIKGMNDILPPESARWEWLEDTVRTLMARYAYRNIRTPIVEPTPLFVRGLGEVTDIVEKEMYSFE
DRLNGEQLTLRPEATAGVVRAVVEHSMLYDGGKRLYYMGPMFRHERPQRGRYRQFHQIGAEALGFPGAEA
DAEIILLAHALWAELGLKDVRLELNSLGQPDERRAHRAALIAHLEQHQDALDEDARRRLHSNPLRILDTK
NPAMQAVVEAAPRLIDFLGEASLKHFETVKAILDANGVAWSLNPRLVRGMDYYNLTVFEFVTDQLGSQGT
ICGGGRYDYLIEQIGGKPAPAVGWALGVERVLELIKEQEAQAPRPVADAYAIVPDASALPVVMAALQRLR
ALGVSVQMHSPTAAGEGMGSMKSQFKKADASGSRFALVFGADEMARGAVTIKPLRDGGEQVERPLATLAD
WAASLQSPR
>gi|319763713|ref|YP_004127650.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Alicycliphilus denitrificans BC]
MNMPDTAAPIAMVAPLARRSRQARIVWGSRVVTVGGDAPVRVQSMTNTDTVDAIGTAIQVKELAQAGSEF
VRITVNTPEAAAAVPYIREQLDRMGESVPLVGDFHYNGHRLLTEFPDCAQALSKYRINPGNVGKGDKRDK
QFGQMIEAAMRWDKAVRIGVNWGSLDQELLADLMDANSQRAEPWDARQVMYEALITSAIESARRAEAMGL
AGEQIILSCKVSGVQDLIAVYRELARRCDYALHLGLTEAGMGTKGIVASTTALSILLQEGIGDTIRVSLT
PQPGEARTQEVVVAAEILQSLGLRAFVPSVTACPGCGRTTSTTFQELAKQIDDYLRAQMPVWRLRYPGVE
RLKVAVMGCIVNGPGESKHADIGISLPGTGEAPAAPVFIDGEKALTLRGDNIAREFQDIVNDYIAKRFGA
GADA
>gi|319763714|ref|YP_004127651.1| hypothetical protein Alide_3038 [Alicycliphilus denitrificans BC]
MSESMATHDADHSAPAAGESAGGLLRRLRESAGVHIGALAAALKVPVAKLQALEADDQDAFPDVVFMRAL
ASSVCRTLKVDAAPVLALLPQGRPAQLPPDKGINASFKDPIRRGGKGVSLEQPRSRLVGIAALVLLAAAL
AMAFLPLGTSDKSGEAEPAAQPPQQVAPTQDAREPGDAAAGQPGPAATQEVPAAQAPAVPGPARAAASAD
DAPAAQAPEPEGVLVIRARAESWVQVRNGAGRVVLQKAMAAGENYSAEGPSPWSVVVGKADATDVIVRGQ
PMDLKAIARENVARFEVK
>gi|319763715|ref|YP_004127652.1| type iv pilus biogenesis/stability protein pilw [Alicycliphilus denitrificans BC]
MTVWRTDRGRAGRWLLAACVAAAVLAALAGCAHRAADPGASEPVAGSGGETDVRRRARIRLELAANYMQM
GQTAVALDEVRQALATDPGYADAYHLRGLVYMSMGDLALAEDSLKRAQAMKPADPDIMHNYGWLQCQRQQ
YEQANQLFERALATPTYAARSKTLMSQGLCYQRAGRAADAEQTLLRAYEIDAGNPVVGYHLASIMLARAE
AKRAQFYIRRVNNGEFANAQSLWLGIKVERALGDSVAMRQLGDQLHKRFPDAKETSAFDRGAFHE
>gi|319763716|ref|YP_004127653.1| radical sam enzyme, cfr family [Alicycliphilus denitrificans BC]
MTTNLLDLDLDAMAAFCERLGEKRFRATQLFRWIHQRGASDFDQMSDLAKSLREKLKGCAHVSGLQAISE
HASADGTVKWLFDVGGGNAVETVFIPEDDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEIVAQLWH
AEHVLRQRRGDGERVISNVVMMGMGEPLQNYSALVPALRIMLDDHGYGLSRRRVTVSTSGVVPMMDRLGR
DCPVALAVSLHAPNDELRDNLVPLNRKYPLQELLAACRRYLEHAPRDFITFEYCMLDGVNDQPEHARELI
ALVSRKAADGGVSCKFNLIPFNPFPASGLRRSPAAAVSAFAKLLSDAGIVTTVRKTRGDDIDAACGQLAG
DVKDRTRVGERMARLRTIEIKPIT
>gi|319763717|ref|YP_004127654.1| nucleoside-diphosphate kinase [Alicycliphilus denitrificans BC]
MAIERTLSIIKPDAVAKNVIGQIYARFEAAGLKIAAARMIHLSRAEAEQFYAVHKERPFFKDLVDFMISG
PVMVQVLEGENAILKNRELMGATDPKKAEAGTIRADFADSIDANAVHGSDAAETAQVEVAFFFPGLNVYA
R
>gi|319763718|ref|YP_004127655.1| pseudouridine synthase [Alicycliphilus denitrificans BC]
MNDSNKALEAAQAPAEAQVPASAEAPKARRPRTRKPAGKAASADHGADAPRQQEPQAQADAPSASAEAAD
RPQRPEHRDAARKHGRRDGKPAPRGDGYRFADVVSGQLDQDEGDTEVVPHKRVLLPQPESPKLHKVLAQA
GMGSRLEMEQLILEGRISVNNEPAHIGQRVQFGDQIKVNGKPIRFRVAPPPTRVIAYHKPVGEVVTHDDP
QNRPTVFRKLPRLQQGKWQSVGRLDLNTEGLLLFTSSGELANKLMHPRFGLEREYAVRVLGALSDEERQR
LLDGVSLEDGMAAFGSIEDGGGEGANCWYRVTISEGRNREVRRMFEAVGHAVSRLIRIRYGAMMLPRGLK
RGAWLELDEHDIRALMQAAGVPADAGGGARAGRNGRRGERKPMGAKMQGEGRGKAAGRAGRSSGSSQPDP
MKTSVGYIGADSFSRHRQQQQRGGGSRRGGR
>gi|319763719|ref|YP_004127656.1| segregation and condensation protein b [Alicycliphilus denitrificans BC]
MNSVEAKRVLETALICAPQPVSVRELRTLFDDALGSDTVKALLLELQQDWALRGVELVQVATGWRFQSRP
EMREYLDRLHPEKPPRYTRATLETLAIIAYRQPVTRGDIEDIRGVTVNSLIIKQLEDRGWIEVVGHRDTV
GRPALLATTRQFLDDLGLQSLDQLPMLEDPGVQANVLDALGAAADTQQPGEEMAVQSGEEIAGAPALVAG
VTDEDGDGVAGS
>gi|319763720|ref|YP_004127657.1| pseudouridine synthase, rlua family [Alicycliphilus denitrificans BC]
MAGDGLPWPDEESDPQRTAEEESDAELREVMVPAAQHQARLDKALAELVPEFSRSYLQQLLAQGDVRLNG
QPAAKPAHKVRAGDQVAVRMRPTQQSQAFKPESLPLDVVHEDEHLLVIDKPAGLVVHPAPGNWSGTLLNA
LLGRDAQAMQVPRAGIVHRLDKDTSGLMVVARNRAAMDALVRMIAAREVSRQYLALAWGAWSGSEQRRIR
APIGRDPRNRLRMAVVDLGQHAGKEACTDFDLLASGEEVCLVRCTLHTGRTHQIRVHMASIRHPLVADAL
YGGAVGGPMRRQALHAFRLAFTHPVTGKPMEFHAPLPEDMRQALDFWGLRYN
>gi|319763721|ref|YP_004127658.1| peptidase m23 [Alicycliphilus denitrificans BC]
MFVSRGLVALGVFVLAGGGLLAGCSAPVNRAPVVDRGTFANGGATPASTAPEAKPLPGAENAGKPGYYTV
KPGDTLIRIGLENGQSWKDIARWNNLENANLIEVGQVLRVVPPAASVASDTGVVTRPVVSSPLASASPAS
VPKPTASAASAPTAPASAAAAPAPAPAPEPAPAMAGGADDMRFIWPSSGTLLAGFDEVRNKGYDIAGKAG
DPVLAAADGRVVYAGAGLRGYGNLVILKHNNTFLTAYAHNQTLLVKEDQNVRRGQKIAEMGSTDADRVKL
HFEIRRQGKPVDPARYLPAR
>gi|319763722|ref|YP_004127659.1| protein-l-isoaspartate o-methyltransferase [Alicycliphilus denitrificans BC]
MQRRPGFPARIDWTKDAAPAASLAPARVRREAPPPTPQGVGLDSAAVRARMVQRLAAAGITAVPVLQAMG
NVERHRFVDTALVNQAYEDTSLPIGLGQTISKPSVVARMTELLLGAQCARAGGLGRVLEIGTGCGYQAAV
LARLAREVYTIERLRALHEKARENLRPLRLANVHLILGDGMLGYAGGAPYAGIISAAGGGSLPPQWCEQL
AMGGRLVAPMAGVDGRQMLLVVDKTPKGLEQTVLEAVHFVPLKSGVV
>gi|319763723|ref|YP_004127660.1| stationary-phase survival protein sure [Alicycliphilus denitrificans BC]
MASYNGLHSVTVTMKILISNDDGYQAPGIVALHDALKAIADVEVVAPEHNNSAKSNALTLHSPLYVHRAA
NGFRYVNGTPADCVHIALTGVLGYRPDLVVSGINNGANMGDDTIYSGTVGAAMEGYLFGIPSMAFSQVDK
GWGELDSAARKAREIVEQMQRHKLVGGAPWLLNINIPNMPFDALRPLRLCRLGRRHAAERVIEQQSPRGE
LMYWIGGAGPAKDASEGTDFHATAHGHVSMTPLKVDLTDHDGLGYWAQTAARLVPQRVQDGGG
>gi|319763724|ref|YP_004127661.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MKLRSVTLRTLCIFLPILQMDSAKSPSEVARETLKLLAARRLSPTPDNYQALYEEVSGVRTAPNFPTAQL
RHILHVMPGQTPGQKRLLGQLENAVAQQDWSMLKNVLVGYANLGLSPVATPPPASVSITQLPTTLAQNLA
RLVSNTLPALGEDDPRVHELAAQLCAFLREPERPIATAELMLSDFSYRLSFAAEDQAAIRQGLLGLLRLV
FENIAALSIDEPWLHGQAEALLAASTPPLTLRRLDDVHKRLKDVIFKQSEAKDRTVQAQTQMRELLATFI
ERLAQMDESSSTYNETMERCAERIGRATQLQDIMPLLEEVMAATRAMALNSRVTRSELQDLRERTEATHA
EITQLRRDLDHASAQARHDPLTGALNRKGLDEAMEREIARAFRLDTPLCVALLDVDNFKAINDRLGHAAG
DEALMHLVRVTREVMRPQDQLARHGGEEFVLILPNTQLADGVKAMERLQRELTKRYFLKEQERLLITFSA
GVAQVEGKNGSADAIRRADEGMYLAKRSGKNRVVAA
>gi|319763725|ref|YP_004127662.1| alkaline phosphatase [Alicycliphilus denitrificans BC]
MPTLAAMHRRRLLQQAAWAAMATQLPRWAWARQTLRHDPFGLGVASGEPLPDGVVLWTRLLPPDPADAAA
PWAGPLTVRWEVADDAQFRRIVQHGSATALPDLAHSVHVEVAGLQPGRWYYYRFMLGDAVSAVGRTRTAP
APHALERRLRVVYASCQRWEHGYYAAWRHACADQPDLVLFLGDYIYEYASPKDANGLARTHGLRLPRSLA
DYRERYALHKSDPDLQAAHACAPWVVTWDDHEVQNDYAGDHGRGDAAEWLPLRTAAWQAFYEHMPLRAST
LNSSAFQGLQLYRRLHWGRLARLHVLDARQYRDLQACRKPGGGSAGAVRPEACPELTDPQRSFLGWQQEQ
WLQAGLAQDARERATHWSVLAQQTLFAPRHYPSGLQSTDSWDGYPAARERLCHALAQQTPRNTVLLGGDI
HQNYVCNVPAPPGAGGAPRILASEFCGTSISSRAGTTQDKVDAIRRLNPHVLLARCDERGYGLCDITPTL
WTTRLRAIRDPLDAGSDAYTLARFVVEDGRPGPRPA
>gi|319763726|ref|YP_004127663.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MSQPSIKQLEAFWWAATCANFATAAERVHLSVSSLSKRIAELEATLGQPLFDRSGHRAVLTEAGERLLPA
TLDVLNAMAALGQTLDARAALAGRCRFGVGDLSALTWLPAFVAAVRRAHPQLELEPFVDVGGVLERRLAD
GELDFAVIAGRSSRSALLSQPVGAAHFAWAAAPGLPGADRLDAAALLRCHPLVTLPHGAGTTRLLDDWLL
ANHAAAHERIVCNSWGAVAGMLRQGVGVGFLPAHWVDALSLRAVGAGMPLAPLQYAFQWRRGDARALIAA
LRPLAQAQVDFSVSPVFTGVVSQR
>gi|319763727|ref|YP_004127664.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Alicycliphilus denitrificans BC]
MASYAEPSPVTVPVALRNMLSLHDFEAAARRRLPRPIFGYIAGAAEDNTSLRDNREVFGEYGFATRVLRD
VSRRSQAVELFGQRYSSPFGIAPMGINALSTYRGDLVLARAAQQAGIVSIMSGTSLIPMEEVARESPATW
FQAYIPGDQERIDALVDRVARAGFGTLVVTVDIPVSANRENNIRTGFSTPLRPSLRLAWDGMVRPRWVAG
TFLRTLLRHGMPHFENSFATRGAPIVSSSVLRDFSARDHLNWGHIEAIRRRWKGPLVVKGLLSVEDALQA
RRVGADAVVLSNHGGRQLDSAISPLRVLEAVVAAVGPDYPVLIDSGFRRGSDVLKALALGARMVLVGRPF
NYAAAVAGEAGVAHAIGLLQEEVDRNMAMLGVTGCAELGPQHIVRRRA
>gi|319763728|ref|YP_004127665.1| hypothetical protein Alide_3052 [Alicycliphilus denitrificans BC]
MPSFSLRPGAHALIGGLALAAGTAALAQAAYPSKPIRLIVPFAAGGTTDIIARVVADPLGRELGQPVVVD
NKSGAGGTIGATEAMRAKPDGYTLSVATVSTTATNPAITPKFPYDPETDFVPIINIAATPNVIAVNPRFP
GHDYKGFVEELKKSPGKYAYASTGTGSITHMLMELYKGMAGVQMTHIPYRGAGPALNDVVAGQVNMNLDN
LPSSLPFIRDGRLIPIVVAAPQRLAVLPNVPTFKEVGLEPVNRMAYYGIVGPKGTPREVVDRINAALKKV
LAEPAVKKRIDDTGSLVIANTPEQFAEQIRNEFAIYKDVVRKQKLTLE
>gi|319763729|ref|YP_004127666.1| ureidoglycolate lyase [Alicycliphilus denitrificans BC]
MRLFRFGAVGQEKPGALDRSGRMRDMSLLIPDWTPEWMAPERLKALQAIDLDKLPLVAEGTRIGAPLAGI
RQFVAIGLNYRQHAMEAGMEIPREPVVFNKAITCIAGPNDTVELPPDSVEGDWEVELGIIIGSKAQKVGE
AEALSHVAGYVLANDVSEREWQAKRNGQWGKGKSFDGFGPIGPWLVTTDELADPQNVPLTLTVNGQVRQK
SNTSDMIFPVAYIVSYLSRFMTLLPGDLVITGTPQGVGLGMKPPVFLRRGDVMTLDGGVLGTQRQQVV
>gi|319763730|ref|YP_004127667.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MQTQAPPEDHRTRVGAQRRERTRLQLLTSAIGVFNDKGADATVIDDLIAAAGVSRGTFYNHFKTTGELLT
ELASRMSDEVLAVVDPLVLRYHDPVERFAIGMRLYMRMTLRYPQWGRFITQVGTRVAARGQLIDKYVTRD
LCTAQERKLLNVPDVAVARDMALGAIFYGIETMLTEPTRSNHAENLIRHVLIGLGLGASEAARIVDMPLQ
MPARVQGPVFDSLE
>gi|319763731|ref|YP_004127668.1| DNA mismatch repair protein muts [Alicycliphilus denitrificans BC]
MNKADLTEHTPMMAQYLALKAQHPDTLLLYRMGDFYELFYADAEKAARLLDITLTQRGQSAGQPVTMAGV
PFHALENYLGRLIRLGESVAIAEQVGEVGAAKGPVERKVVRVVTPGTLTDSELLPDKSESVLLAVHQGAR
ARCGLAWLAVTQGVVQLAECTQAELGAWLARIAPSELIHSAGITQRFEEQLAGLRQGGMFACPMSLRPDW
QFDAALGRRKLLEHLGAASLQAWNAEGLQDAHAAAAALLQYAEHTQGRALSHVHGVRVQQSDELIHLPLA
TRRNLELVKTLRGEDAPTLFSLLDTCMTGMGSRLLKTWLLEPRRDRGDARRRLAATQALRGTGGGQGPWQ
LLRGALKGVSDVERITARIALRQVRPRELVALCSTLQKSELLAQSSQAPEAFLAQIFNDLQPPAECTALL
RAAILEEPAALVRDGGVIAPGFDAELDELRAIQNNCDGFLLDLETREKVRTGIPNLRVQFNKVHGFYIEV
TSSHVDKVPGDYRRRQTLKNAERFITPELKSFEDKALSAQERGLAREKWLYEQVLDQLQPHVPRLTRLAQ
ALAALDVLCCLAERSLTLDWCAPQFVAEPCIDIEAGRHPVVQARLAETSSGAFIPNHTRLNANTRMQIIT
GPNMGGKSTYMRQVALIVLLASMGSHVPATACRLGPIDAIHTRIGAADDLANAQSTFMLEMTEAAQILHA
ATPHSLVLMDEIGRGTSTFDGLALASGIATHLHDRTKAFTLFATHYFELTELSARHQHAVNVHVGATESG
HDIVFLHEIQPGPASRSYGIQVAKLAGVPAAVLHHARHTLAALEERAGEDDLQVDLFAPPPAPEVQAVSP
VEAALAQINPDALSPREALDALYQLKRLAP
>gi|319763732|ref|YP_004127669.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC]
MKHTALAATALLLAAGCSTQPAYQRPAIELPAQFKEATAAAAQAGIWRPAQPQDAAPPEEWWRLYGDPVL
DDLQQRAAVANPGIAQAVARLRAAQAAVAGSRAALLPTLGASSSATRARGASTANTAGPVTSYSLGLNAG
WEIDLWGRLSGAASAAEASAQASGADLAAARLSLQATAAQTYFALRAAEAQGALLRDTLAAYEQSWQLTR
NRERAGVASPADVAQAEAQYKSTQAQLLEAETSRAQIEHALAALIGLPPAAFGLDATARLPAPPEVPAEL
PSRLLERRPDIAAAERRVAAANAQVGVAQSAFFPALTLSAAGGWRGASLGDLVGAPNLFWSLGPALALTL
FDGGARSAAVESARASLDLAAAGYRQAVITALQEVEDNLAAATSLAREEQVQTEAVAAAQRALTIATNQY
KAGTVGYLNVLSAQTTVLSAQRGLIDVKNRRLAAVNTLLKNVAGRWDGPP
>gi|319763733|ref|YP_004127670.1| acriflavin resistance protein [Alicycliphilus denitrificans BC]
MSPSALFVHRPVATMLLTIGLALAGAVSFFLLPVAPLPQVDYPTISVTASLPGASPDTMAATVATPLERS
LGAIAGVNEITSRSTLGNTRITLQFDLSRTVDSAAHDVQAAINAARTLLPSGMPSNPTYRKINPADAPIM
ILALTSSSLTRGQMYDAASTVIAQKLSQVEGVGQAAVSGGALPAVRVELDPLRLAANGISLEQVRSAITG
NNANRPLGAVEREDHYWQLATNDQARVAAEYAPLVLRWNNGQAVRLSDVADVLDSVQDVRNYGVANGKPA
ILLQVYKQPGANILEAVDKVRALLPQLKASIPAAIDLTVVSDRTPTLRASVQEVERTLLLAVALVILVVF
LFLRNGRAALVPAVAVPASLAGTFGVMYLAGYTLDNLSLMALTVATGFVVDDAIVVLENVLRHMDRGKSA
LQAALDGTREIGFTVVSMSLSLIAVFVPILFMGGIVGRFFREFAVVMSSAILVSMAVSLTTTPMMCAHLL
RAPQAQAAPRRAWARVAAWLGRIERASRRLYRRTLAWGLRHQPLVLLSLAAVVALNVHLYMAIDKGFMPD
QDTGRIMGFIRADQASSFQAMQQRIQRFLAIVQQDPAVEYVMGSTGGGQINAANMFMTLKPLAERKVSSD
EVIDRLREKLRNEPGARLFMMKQTDVRIGGRQSMASFDYTLQSDGVEELRAWEPRIRQVMSELPELEDVN
SDVQDYGVQTSLVIDRDAIKRLGLSMAQIDATLNDAFGQRQVGVIYNPLNQYRVVMEAAPRFLQSPETLR
GFFFVNAGGKQVPLTAFARIATTNTPLAVSHQGGTPASTISYSLAPGVSLSQANDAIRAAVARLGVPVSV
RGSFSGTAGAFQQSLAGQPLLILAAILTIYLVLGVLYEDLVHPLTILSTLPSAGVGALLALMLFKTEFSL
IAFIGVILLIGIVKKNAIMMIDFALSRERGGHTTPAQAIYRACDLRLRPILMTSLAAIMGALPLALGQGI
GAELRRPLGLAIVGGLLVSQLLTLYTTPVVYVQLDRLRRRVNRWFSMKNRSSARPSSAGSY
>gi|319763734|ref|YP_004127671.1| acriflavin resistance protein [Alicycliphilus denitrificans BC]
MNLSRLFILRPIATSLLMVAILVAGMLAYRLLPISALPEVDYPTIQVTTLYPGASPDVMTSNVTAPLERQ
FGQMPGLAQMSSTSSGGASVITLRFALDYGLDVAEQQVQAAINAGANLLPGDLPMPPLYSKVNPADAPIL
TLAVTSPSLPVIRINDLVENRLAPKLSQVGGVGLVAIAGGRRPAVRIQANPQALASVGLSLEDLRGAIAA
ANVKQPKGGFDGPLRATTIDANDQLQSAQEYRDLIIAYRNGNPVRLSAVADTVDDAENTRLAAWAGTPDD
GSKAAVILNIKRQPGANVIETVDRVKALLPQLEETLPASLQVHVLTDRTVTIRASVRDMQHELLLAVALV
VAVIFVFLRSGTATLIPSFAVPLSLIGTFGVMYLAGFSINNLTLMALTISTGFVVDDAIVMIENIARYVE
AGEPPLAAALKGARQIGFTIISLTISLIAVLIPLLFMGDVVGRLFHEFAITMAVSILISAVISLSFTPML
CARLLRHTPEESHGRLYQATGRFFERTIALYGRTLGVVLEHRMLVWLVFLATLALTALLYLVVPKGFFPV
QDTGTLQATTVADQSISFAAMAERQQQMAERILRDPAVKSVSSFIGVDGSNTTLNSGRMQIDLQPHGQRD
SLAVVLRRLSDDTGSMPGMRLYLQPVQDLTIEDRVARTQYQLLLSSPDMEQLTRSTQALLERLLATPGLV
DVASDLQGQGRQAYVSIDRAQASRLGVTVAAVDTALYNAFGQRLISTIFTQSNQYRVVLEVAPQFKIGPE
ALASIYVPSSGGTPVPLSSLARVEERSMALAVNHVGQLPASTISFNTAPGVSLGQAVKAIERARDDLRAQ
GQMPISVDMAFQGAALAFQASLTNTLLLILAAVITMYIVLGVLYESTIHPVTILSTLPSAGVGALLALGM
AGLEIDIIAVIGIVLLIGIVKKNAIMMIDFALDAQREQGLSAREAIYQACLLRFRPILMTTLAALLGALP
LMLGQGVGSELRHPLGVTMVGGLILSQLLTLFTTPVIYLTFEGWAQRWRGARVGVENA
>gi|319763735|ref|YP_004127672.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus denitrificans BC]
MSNPQSCKGPVAPHGYACKGRMRLGWVAAVAAVALLAAGGAWWWQQRGAAPAQGQAAGPRFGGGGAQAQP
VSVGRVERRDMRVMVSAIGTLQSRATAVVRTKVSGELKALHFNEGDEVKAGQLLAQIDPRSYQAAFDQAQ
GTLMRDQALLRNARLDLQRYQELKSQDSIASQQVDTQAALVRQYEGTVAADQAQVDAARLQLSYTRVTAP
IAGRLGLRQADLGNVVNPADANGIVTITQLRPIDAVFSVPQAQLDRIRERQAGGAELPVELWDREQRQLL
ARGRLGALDNAIDLTTDTLKVKAAFANADGRLFPNQFVNVRLQVDLLKDTLTVPAAAVQNNYVYLVQDDG
TVTQRRLRVGVADGDRVSVEGDLPEGAQVVTDGLDRLREGARVMVIDAQAAAKADQAVQDAGQRRAQMLR
NLTPEQREKLSKMTADERRAFLRGLRAQREGAAPTASAPASAPAPAASPPPAAR
>gi|319763736|ref|YP_004127673.1| alpha/beta hydrolase fold protein [Alicycliphilus denitrificans BC]
MASIVFSHANSFPASTYRVLFDALRKRGFKVSAVERYGHDERYPVSNNWPHLVQQLADFAAEQQRRTGEQ
AFLVGHSLGGFLSVMAAARHPELARGVVLIDSPLIGGWRAGALGMAKQAQVVGAVSPGRISRARRNSWAS
TEEALEHFRRKKAFAHWDPRVLQDYVAHGLQDQDGKRVLSFDRAIETQIYNTLPHNLGRLLQTHPLKCPA
AFIGGRDSAEMRQVGMAMTRRITQGRVMMLDGSHLFPMEQPLATAAAIEASLLNLERLAA
>gi|319763737|ref|YP_004127674.1| undecaprenol kinase [Alicycliphilus denitrificans BC]
MDSLLLLKAAIMGVVEGLTEFLPISSTGHLILAGSLLGFDDAKAKVFDIAIQTGAIFAVILVYWQRIRDT
LVALPSQRQARRFALNVLIGFFPAVLLGLLLGKAIKAHLFTPVVVASTFIVGGFIILWAERRQQGTVRIH
SVDDMGPWDALKVGLAQCLAMVPGTSRSGATIIGGMLLGLSRKAATDYSFFLAIPTLIGAGAYSLYKERA
LLSMADVPLFVVGLVFSFISAWLCVRWLLRYISTHSFVPFAYYRIVFGVVVLATAWMGVVTWAD
>gi|319763738|ref|YP_004127675.1| hypothetical protein Alide_3064 [Alicycliphilus denitrificans BC]
MLIHIATHQPQMLASIVQGTPSWVWYLLATLLWLGLSQTLPRQAGLRRVLFMPLALAAFSAWGLLSAFGA
EPGGGALAVWLLAAGAAALASLALRGTPPAGVRFDAQALRFHLPGSPVPLLLILAIFLTKYLVGVELALQ
PALGHDGGFALQVAALYGLFNGLLLARAARLWHLVRRTRPAFA
>gi|319763739|ref|YP_004127676.1| hypothetical protein Alide_3065 [Alicycliphilus denitrificans BC]
MHTETPAAIGGGPAERLDGRRPLPRMTDMIPDDDIERLARKRAGAKLGWYAHALVYVAVNLALFAFSRYG
WGQRPWSVFPLLGWGLGLALHGVSVFVLGTGSGLRERMVQRERERLQRERQER
>gi|319763740|ref|YP_004127677.1| histidine kinase internal region protein [Alicycliphilus denitrificans BC]
MPIDWIDKLRHLLQTLAFCLAVAAIQYAFRPEQPYGVPLAYSLCIGVLCWAFIDIGRHLLASSAGTGWPA
GWRGMALPACGIALGFVLGSLLADAWTGHSTWSGAHLRTSIGITLLAGTAATYWFHTRGKSAWLQARMAD
AQGRAAEARLKLLETQLEPHMLFNTLANLRVLIASDPARAQAMLDHLIAYLRATLGASRSALHPLSEEFA
RLADYLALIAVRMGPRLQYRLDLPDALRDVPVPPLLLQPLVENAIRHGLEPQVAGGSVAVQARLLEDGAR
LQLSVHDTGAGPGAEAGNNSTRFGLRQVRERLATLYGSAATLELIASSAGGTSAIVTFPLKHATDRPDRR
G
>gi|319763741|ref|YP_004127678.1| lyttr DNA-binding region protein [Alicycliphilus denitrificans BC]
MQPTALIAEDEPLLAAALQQELARAWPGLAIAATVGDGLSAVREALRLMPDVLFFDIRMPGQSGLDAAVE
LADAWDTGARPFPALVFVTAYDQYAVQAFEAQAVDYLLKPVQPGRLDRTVHKLRQALQQRASPALEQTLA
QLRELVQAPGVGGAAPSPAAPRLDVIQAGSGAQIHFVPVAEVLYFEAADKYVRVLTAEHEYLIRTPLKEL
AAQLDPAAFWQVHRGTLVRADAIAAAVRDEAGRLHLQLRGRPERLAVSRLYAHRFKGM
>gi|319763742|ref|YP_004127679.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MGDLSAVLPEKVQSSNIWRLSVAQALAGANSVVVYATGAIVGNMLAPTPMLATLPVSIFVVGMAACTLPV
GAIARRFGRRTAFLAGTGAGVLTGLLAMLAIIQGWFWLFCLATFFGGSYAAVVLSFRFAAADGVAPARRP
RALSLVMAGGVAAGVVGPQLVTWTMDLWPPHMFAATFLVQAAVAAVSALILLGVHLPMPTAQEIAGGRPL
AEIARQPRFVAAAIGGAVSYLLMNFLMTSAPLAMRICGHSQESANLGLQWHVIAMYAPSFFTGHLIARFG
AGRMAIVGLLLTGLSAAVGLGGIDVAHFWATLVLLGLGWNFGFLGASALVLECHRPEERTRVQSLNDFIV
FGLMAIGSFLSGSLLSAYGWNAVLWVSFVPLVLAVVALAAAMARSAAQARA
>gi|319763743|ref|YP_004127680.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MTSAPDAPVLAPRAALAMLVALTSGFALSSAFRTVAAILAAPLQADFALSPQALGVFAATFHFTFGAMQL
FMGIGIDLYGVRRTILAAFPLCIAGALLSALAPGLGLLVLGQALIGVGCAPAFLVCTVFIARHFAPQRFA
AMSGMAMALGTLGMLFTGTPLAWLVQQWSWRAGFAVLALMALLAWLWMWRSVREPARSPAHDAPRESVRE
AVLRFAALFTLAHTWGIVALGAVTYAALISLRGLWLGPMLIARHGFSLVQSGNVALALSVVALCGPMLFG
RIDPGPAVRRRWILTCTLLLALLFAAMALLHSAWVDVACMLLTGLLSGFIVLQYADVRAAYPAALTGRAM
AVFTMAMFLGVAAMQWFTGLVASLAQERGMDPFVAVLGCIAALLVLGAGAFWLLPNPPSDGV
>gi|319763744|ref|YP_004127681.1| fad dependent oxidoreductase [Alicycliphilus denitrificans BC]
MQKQVLIAGGGIGGLAAALGSARAGWEVRLFERASAFTEIGAGVQIGPNVVRRLQAWGLQGALQAVAAFP
ERLRVRSALTGVELAALPLGARAIERYGAAYATIHRADLHGLLLAAVRDLPGVHLNLGLSVQEHAQEGGA
VTVRLAHGDGRLVEVEGDALIGADGLRSGTRARLLGEAPTRASGHLAYRAVVRQDQLPQALHSGDVTAWL
GPRLHVVQYPLRRGELLNVVAIRHGRPPADLESWDHGANAADLEAALARTCAPLQDLIRAVPQAGGGWRL
WPLLDRAPVAGPHEMARGLVALLGDAAHPMRPYLAQGAGMAIEDAAELQRALAMHDLEVPLRLTRYALNR
WQRNARVQERSRRNGRIFHATGPVRWGRDLALRLLGERLLDVPWLYRGDGSSASLL
>gi|319763745|ref|YP_004127682.1| aconitate hydratase 1 [Alicycliphilus denitrificans BC]
MTASTTRVHAFASTLKTFTMASGKKGKFYSLPALARKYPGVGRLPVSIRIVLESVLRNCDGRKVTAEHVA
QLANWGATAPRKDEIPFVVARVVLQDFTGVPLLADLAAMRSVAERLGRDPKKVEPLVPVDLVVDHSIMVD
YYGSKQALQLNMKLEFQRNRERYEFMKWGMQAYRTFGVVPPGFGIVHQVNLEYLARGVHQGADGVYYPDT
LVGTDSHTTMINGIGVVGWGVGGIEAEAAMLGQPVYFLTPDVVGLELTGRLREGVTATDLVLTVTELLRK
AKVVGKFVEFFGEGTRTLSVPDRATIGNMAPEYGATMGFFTVDEKTIDYLRGTGRSEAEIEALEAYFKAQ
GLFGIPRAGEIDYSQVVRLDLGDVTPSLAGPKRPQDRIDLGKVKQQFTSLFSKPVSESGFNLPAGRLHER
HALPRRADQAVPDEPPAPEGTPRFEAEMVHNKPRLAVQHVDAPMHHAPDGESPTVGSGDVLIAAITSCTN
TSNPSVLLAAGLLAKKAVEAGLKVQPHIKTSLAPGSRIVTEYLTETGLLPYLEKLGFAVAGYGCTTCIGN
AGDLTAELNEAITKNDLVCAAVLSGNRNFEARIHPNIKANFLASPPLVVAYAIAGTVLTDLMTEPVGKGK
GGRDVYLGDIWPSAEEIHALMRHAMNGKAFRENYAKVRAEPGALWDKVHGVSGNVYAWPPSTYIAEPPFF
ADFALDKGAAGAGGAGAAGQNGDVAVRGARIMALFGDSITTDHISPAGSIKESSPAGQWLLQHGVAKPDF
NSYGARRGNHEVMMRGTFANVRIKNLMIPPLADGSREEGGLTLYQGEGPQRGSKMPIFDAAMQYMAGGTP
TVIFAGEEYGTGSSRDWAAKGTQLLGIKAVVAKSFERIHRSNLVGMGVLPLQLRAGDSWESLGLRGDEVI
DVLPDAALAPQSEARIVIHRADGSRQEVAATLRIDTPIEVDYYRAGGILPFVLRQLLA
>gi|319763746|ref|YP_004127683.1| histone family protein nucleoid-structuring protein h-ns [Alicycliphilus denitrificans BC]
MNASYKELLKQREALEQQINEARRRELATAVAQVRELVAEYGLTQQDVFPTGRTGRTSATSGVKVAPKYR
DPVTGQTWTGRGKAPKWIQNEDREKFAI
>gi|319763747|ref|YP_004127684.1| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [Alicycliphilus denitrificans BC]
MALYCVGDIQGCDEAFGRLLSTIGFSPSRDTVYLLGDLVNRGPGSAAVLRRCMRLGDSVRALLGNHDLHL
LATAHGVRPPSRRDTLQDVLQAPDRQALLDWLRQQPLARRVRHGGTDLLMVHAGVLPQWSADDVLALADE
VHAMLRGPALPDFLREMYGNSPDQWDAGLQGADRLRIIVNALTRLRFCTPEGRMDFESTESAAHAPAGLL
PWFDAPGRRTSGTLIAFGHWSTLGWISRPDIQGLDTGCVWGGALSAVRFGATLAEREHCKVQCAQQQRPG
E
>gi|319763748|ref|YP_004127685.1| apbe family lipoprotein [Alicycliphilus denitrificans BC]
MNNGWQGGRLSRRRFALALPLLGAVAWAPAGMARAAGPQRASRNLMGTRVDIVADGGDARQLQAAIGLAF
EEMQRLEASLSRYREDSVVRRIGQAAGRHPVAVPPEVMDVLASAQRVWRESAGAFDPTVGALSGWHFEPG
RQSMPASAEIAAALRHVDARQLQLDERAGTAYLAGRGMALDLGGIAKLPILAAGLRVLEREGVANALVNG
GGDVLASGRLQGRPWRVGVRDPRAPDRLLGAIEVEGFGVVASSGDYERGFVHQGRRLHHVLDPHTGWPTT
GVHGVALLARDVRAVNGWGTALMVQGMAAAPAWSARHPGVAVLAAGADGVLWRSDAMAKALKPVSI
>gi|319763749|ref|YP_004127686.1| cytochrome c class i [Alicycliphilus denitrificans BC]
MNKTSLTMALAAAALVLAACGKSEAPASAPAPAPAPAAEAPAAAPAPAAPVAENTAGKSAYGKTCAMCHA
AGVAGAPKPGDKADWGPRIAQGKETLYKHALEGFTGAKGQMPARGGNASMSDEDVKAAVDFMADQSI
>gi|319763750|ref|YP_004127687.1| hypothetical protein Alide_3076 [Alicycliphilus denitrificans BC]
MDTLRSLNRLRWWIAAWFIFSLGATLASPLVQPRSMELVCSAGSGATLVVHAKTGNAVLDTLGMDCGLCL
LGSAPPQPAAHAQPALPIVHSQPAPPPEAPAIAPMAAPPPARGPPSFSV
>gi|319763751|ref|YP_004127688.1| nitrous-oxide reductase [Alicycliphilus denitrificans BC]
MSKKEDLGTETVGMGRRRFINTAALAGLTVGVAACNDKPAASPAASGTPASAPAPAAHAGSGANVHLKPG
ELDTYYGLWSGGHNGDVRVLGLPSGREIHRIPCFVPDALVGWGITNESKAVMGTKPDGNLRYTVADTHHL
HASYKDGNYDGRYAWVNDKINARIARIRLDYFVCDKITDLPNVQGFHGIFPDKADPVDPAINYTTRVFCG
GEFAIPLPNDGKDVNAPEKYRSLFTCVDAETMEVRWQVLIDGNCDLVATSYDGKLAATNQYNTENGIHYE
DMMSAERDACLFFNVARIEEAVKAGKFKTYGNKVPVVDGTHEANKDPKTALVAYVSVPKNPHGVNASPDG
KYFICAGKLSPTTTTIELAKVLDWFDGKMEKLDDAIVAEVEVGLGPLHTAFDGRGNAYTTLFLDSQIVKW
NVEKAIAFHKGDKNAKYVVDRIDVHYQPGHINASQSETKAADGKFLAVGCKFSKDRFLPVGPLHPENEQL
IDISGEKMVLLADHPVRGEPHDFIIFKRDLLKPKQVYELDEFPLAVKDAKESGVFRNGKKVTVKLTSQAP
AFSMREFTVKKGDEVTLILTNLDKIEDLTHGFALPKYNIQFVINPLETKSVTFVADKPGVFWAYCSTFCH
ALHLEMRTRMIVEA
>gi|319763752|ref|YP_004127689.1| fmn-binding domain protein [Alicycliphilus denitrificans BC]
MFSLGQRFAAFCFALFMALALQAPRAHAGAYEAELPANLASTPDMCSLLPCTEVFPGATHFSERKGQPPY
VEAYDNDSAQKKLLGYVMLSTDITDTPAYSGKPVVTLIGMDTKGHFVGLKVLKHSEPILLLGIPESALIN
FNNQYVGKSVTDTIEVGPSRPDENVTGVDAISGATVTVVAQNQVVMTSGAAVARQTGIIAPTVREPAKFA
TTGQKYDWAQLVKMGAVQQLLVKPEQVGLPRGPEPFIELWFGDLNQPDIGRSVLGDNAFDSLRSRLKEGE
NALFVIKTAGQESFKGSGFVRGGIFDRVQVKQGADSFTFRDLDSYNLYGLEAGGAPRYTESAIFIIRSPS
FSAAYPWKLAFLGNRVDRATGHRSFAVFESKYWLPASSLEGGRPKVEEPAAPWVRIWKSQALPISLFGLL
LVAVTVVYALRERLTRLSTHKNKWPVNGFKYTFWALSIFWIGFGYMAQPSITQVLTWFHSLLFQWTWSLF
LSDPFIFLFWIFIIVTVFLFGRGLFCGWMCPFGSLQEAIFKIAKAIGLKRFQTALPQKWHDRLKWVKYAV
FFFLLTVSMFSMGLAEKLAEVEPFKTTFLVGVMNRAWPYGLFVAAILGVSIFIERPYCKYICPLGASLAM
PSTFRWFGLKRKQDCNSCKACAVGCGAQAIDADGRIDHRECLHCLDCMILYTDTKGCPPLAKERKRREKD
GLEITPIGKNGYFIPIHPAKVEDQISPKAKNGVDPRMPTDRTLPAHKEDVGLIEWLWLELRDHLWPWSRE
GWHSQRALQIAGLALAIAATIAWVQAALGHLSSGAIIGWWFGWSVYEVLIRLSGRRYVKDGPWWRDQYRV
AGVMDMMSYVGFKNLMIGAALFLVLKTLGWLIA
>gi|319763753|ref|YP_004127690.1| periplasmic copper-binding protein [Alicycliphilus denitrificans BC]
MTSLSHLGAALALCIAGACQAATLSVRPGDDLAAAVAKARPGDVIEVARGQYRANLLIDKPLTLRGLDRP
TISGGNQGDTIRVTAPDVVIEGLIVRDSGDDLKDQNAGIYLYPGAHRAIVRRCDLTYNLFGLWIEKADDV
LIEHNTITGKREYASPQRGNGVQLYNTKGAKILGNDISFVRDALYVDVSHHAVFRGNRLHHSRYGTHYMN
SYYNLWEDNDTYYNRGGLALMEVRNQEVRGNRAWGNSDHGIMLRTLQDSVIEGNVVAGNNRGFFIYDVEY
IKLNDNLVVDNTVGVHLSAGSTRNEVEGNDFIANREQVRYVGARDERWGTRRGNYWSNYLGWDRNGDGMG
DVQYEANDMVDRLTWRHPSIKLLLASPAVQALRLVGQQFPVLRVPSVVDPHPRMRPYHQDWSQWRGKHFP
GQ
>gi|319763754|ref|YP_004127691.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MASISPASEQMAISLRGVHKHFGALHAVDGVDLDIPPGELFGLIGHNGAGKSTLFKMMLGLLAPTAGSIL
VAGTPVGGRHFRAARRQLGYLPENVVLYDNLDGLETLHFFARLKGAPLQDCPAMLEKVGLAHAGKRPVRE
YSKGMRQRLGFAQALLGKPRVLFLDEPTNGLDPQAIRDFYATLRDLQAGGVTVIITSHILAELQERVDRL
AILASGQVQAVGSVQELRERTGLPLIVEVDMAPEDCHEALHALLATTGAKPAQTPTGLQLQCARTHKMAV
LAALAPLGARVRDLRLQEPSLEDMFFGLSA
>gi|319763755|ref|YP_004127692.1| abc-2 type transporter [Alicycliphilus denitrificans BC]
MELTPILTVAAKEFRDRMRNRWVLAVALVFTVFSLVIAYFGGAQQGQVGFRSIEFTIASLVSLVIYLIPL
IALLLGFDAIVGERERGSLDLLLALPITRLELLLGKYLGLAAALALSTVAGFGLVAVLLWRHMSANALFH
YGGFMLSSVLLGLAFLSLAVLISVLARERTRASGLAIATWFFFVLVFDLLLLGLLVTTGGQFAGDAFAWL
LLLNPADVFRILNVFSLEDVRTLYGLASVVPASLGNPLIMGGVMAAWIVLPLALAQWRFKP
>gi|319763756|ref|YP_004127693.1| nosl family protein [Alicycliphilus denitrificans BC]
MTTCSCLTRRRALGLAAFTVLLAACGDKPGEAQSLAPVEIDRSTSCELDGMLLSDYPGPKAQIHYAGQDK
PAFFCDTVELFNTLLAGEQVRPVRAVYVQDMGQASWDEPKGHWIDAKAAVYVLGSKRHGSMGPTIASFAQ
EADATRFAGEYGGKVLRFADIKLDMVDLSGGALHDTRM
>gi|319763757|ref|YP_004127694.1| hypothetical protein Alide_3083 [Alicycliphilus denitrificans BC]
MSALAALAASAPWSVPAMRKALAPQAAPAPDVCIVAPPTHYDPASGLPPTAARAIPADARCPVCGMFPAR
SREWAAQVIFDNGDAQFFDSPLSLFMYLQDVARYSPGRSAGSIVAHYVTDASAPAGDGGARWIDALGAYY
VHGSSARGPMRAGNLPAFATREAAQAFAAQRGGTVLAFGAIDAALIAELAGRGGHVHQH
>gi|319763758|ref|YP_004127695.1| dead/deah box helicase domain protein [Alicycliphilus denitrificans BC]
MTQPYSTLALAEPLKRAVADMGYENMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLLQRLLKHEN
SSASPARHPVRALVLLPTRELADQVAQQIAMYAKYTKLRSTVVFGGMDMKPQTAELKKGVEVLVATPGRL
LDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLAGSYLQDPV
TIEVARPNETASTVEQRFFSVQDDDKRRAIRHVLTERGLKQAFIFVNSKLGCARLARSLERDGLKTAALH
GDKSQDERLKALEAFKSGDVDLLVCTDVAARGLDIKDVPAVFNHDVPFNAEDYVHRIGRTGRAGASGLAV
TLVGSGDARLVADIEKLIKKKVELEPLELQEERPRGRFNDGRRAWREEGGDAPRSGGRERGGYRGAPAVV
RDAFFDKPYEPSATGSGAASWEVAPKAAVARGSISANIKHKRKLPALFKAPQPEAEPSAQ
>gi|319763759|ref|YP_004127696.1| hypothetical protein Alide_3085 [Alicycliphilus denitrificans BC]
MKWEGNRESDNVEDRRSGGGGGFVGGRSIGIGTVVLALIGWGVFGINPLTTIGVLSGGGAPQEQQAPAQR
PPANDRQAAFVSTVLASTEDVWAQIFRQGGAQYRDPKLVLYRGATPTACGTGQSAMGPFYCPGDQKVYLD
MDFFDTMSRQLGAPGEFARAYVIAHEVGHHVQTLLGATAKVDGMRGRVSQREQNALSVRLELQADCYAGI
WAHHSQQAKNWLDQGDIESAVNAAEQIGDDTLQRQQTGTVRPDAFTHGSSAQRVRWFTQGLKTGSVQACD
TFRAQSL
>gi|319763760|ref|YP_004127697.1| deoxycytidine triphosphate deaminase [Alicycliphilus denitrificans BC]
MSIKSDKWIRRMAEQHGMIEPFEPGQVRESEGRKIISYGTSSYGYDIRCAREFKVFTNIHSTVVDPKNFD
EKSFVDFEGDYCIIPPNSFALARTVEYFRIPRDVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSN
TTPLPAKIYAGEGCAQVLFFQGDEECAVSYKDRNGKYQGQHGVTLPKA
>gi|319763761|ref|YP_004127698.1| hypothetical protein Alide_3087 [Alicycliphilus denitrificans BC]
MESYLLDWSNLLLRWLHVITAIAWVGSSFYFVFLDSSLTPPNDERMKRDGVTGELWAVHGGGFYHPVKYN
VSPPKLPDHLHWFYWESYTTWLSGFALLTVSYLWNAGIYLVSPSNPLMPPSMAIVAALAFLVVFWLLYDG
ICRVFGQKDKGDAIVGALVLVLVCIAAWLACHIFPGQAAFLLMGAMLATSMSANVFFWIIPGQRKVVAAL
KAGQPVDPIHGKRGKQRSVHNTYFTLPVLFAMLSNHYGWLYNHPRNWLVLILMMFAGAAIRQFFVMRHGF
KLGRNAHPWPYAAVGVVVLLGVLGWLRPAPQAAVAAQAGAAPAAAGYEQLHAVMQKHCVVCHSASTVAQK
NVKFDTPEEVKGHAQQIYQQVVQLRKMPFGNPGALTDEERNTFKRWYEGGAPVAP
>gi|319763762|ref|YP_004127699.1| xanthine dehydrogenase accessory protein xdhc [Alicycliphilus denitrificans BC]
MTVLDCLLRRIEAAPACLVTVESTQGSVPREPGAWMALFAGDPQPLGTIGGGHLELQAMHEAHERLADHL
AGRPARAAVVRRALGPSLGQCCGGVVHLRFECVAAADAPALRRRLAPRLQPVALFGGGHVGHALARVLAP
LPFALHWIDSREGVFPPQVDADTVCEHSDPVQAAVPDLAPQSCVLIMSFSHAEDLDIVAACLLRQRERGD
LPFIGLIGSRTKWATFRHRLAARGFSNEELAHITCPIGVPGITGKEPEVIAVAVAAQLLQLLPRDLA
>gi|319763763|ref|YP_004127700.1| hypothetical protein Alide_3089 [Alicycliphilus denitrificans BC]
MPQQSSDAPPPREPARRPFWLPASLMAMVAAIVAACKSGPQAPPPQDSGVPGAAGAAPAAVRASAAATPR
AYRQDAARHLYGLNAQRIYQGKLPPLLYAIGVLEVDIDRNGRVTALRWMRAPRHAPEVVAEIERTVRAAA
PFPMPARMQRVTYTDTWLWDKSGNFQLDTLTEGQL
>gi|319763764|ref|YP_004127701.1| hydroxyisourate hydrolase [Alicycliphilus denitrificans BC]
MGLSTHVLDTMHGCPAAGMAVALYSTQGEQATLIKRLVLNHDGRTDAPLFDNASLRTGTYRLTFDVAAYF
KAKGVVLPEPNFLGSVSLDFGIAHADEHYHVPLLVSPWSYSTYRGS
>gi|319763765|ref|YP_004127702.1| gamma-glutamyltransferase [Alicycliphilus denitrificans BC]
MNFRSTLLAGSLALTLASLVACSSPQPPSAATAQPPAATQTGAAQAAAAAYDFDMDVFHPVAAKNGMVAS
EQEMASRIGLNILKAGGNAVDAAVAMGFALAVALPNAGNIGGGGFMMVHDARTGRSVALDFREVAPSRAT
RDMYLDAQGKVIDGKSLYTHYAVGVPGTVAGMEHALKKWGTLPLSKVVAPAVALADKGFPVSETLAKILQ
QEQKNMGRWPATQAIFWKNGQPLRQGDALVQKDLAQSLRLIGEQGAKAFYEGAIATKIAAEMAPHAGAIT
LADLKNYKVVEREPVRGSYRGYQIVTMPPPSSGGAHLIQILNMMERWPMNQWGANSANSVHHMAESMKLA
YADRSEYLGDPDFVKVPLKGLTSKRYADQLAADINPTQARTAKDIKPGKPQPYESDQTTHFSVVDKAGNA
VAVTYTLNTNFGSGIVAKGTGILLNNEMDDFSAKPGVANAYGLVGGDANAVAAGKRPLSSMTPTIVLKDG
KPWLVTGSPGGARIITTVLQQVVNAIDFGMNPAEAAATPRFHHQWTPDELRIEKGFSNDTLALLRQWGHN
VALKPSMGRTQTIQIRDGMLYGASDPRNPDGQTLGY
>gi|319763766|ref|YP_004127703.1| hypothetical protein Alide_3092 [Alicycliphilus denitrificans BC]
MAAHASTTATLIVLLPLLFWRLRARYRRLVGRQRTNKYRPWITLGIYAAILGALAWAVWGQWPALQALAG
GLAAGWLLSRWAWRRTVLEATREGLYYTPHTHLGVALLLLFAARIAYRIVEVVWLLPPSQGAGLHSFIAS
PLTMAVFGLMAGHATGYAVALFLWRRRVLAARREREAAAYR
>gi|319763767|ref|YP_004127704.1| 2-hydroxy-3-oxopropionate reductase [Alicycliphilus denitrificans BC]
MNASSLKLGFIGLGIMGAPMCGHLIAAGHQLFVHTRGKVPGAIAESSATQCTTARGVAERADIVFLMLPD
TPDVEKVLFGEDGVAAGLKGSSGKVVVDMSSISPVATKDFARRIEAVGARYLDAPVSGGEVGAKNATLSI
MAGGHEDVFERVRPLFEKMGKNITLVGGNGDGQTAKVANQIIVALNIEAVAEALLFASRAGADPARVREA
LLGGFASSKILEVHAERMIRRTFEPGFRIALHQKDLNLALSAARELGVALPNTATAQQLFSACVAHGGAG
WDHSGMVRALETMANFEVGQKAGA
>gi|319763768|ref|YP_004127705.1| hydroxypyruvate isomerase [Alicycliphilus denitrificans BC]
MPRFAANLSMLFTEVPFLERFERAAQAGFEAVEFLFPYAHMVDEIKERLDATGLEIVLHNLPAGDWDAGE
RGIACDPARVDEFRTGVSTAIAYAKALGVPQLNCLAGKAPAGVDAALLRSTFVGNLRFAAAALKAANLRL
LIEPINPFDIPGFYLNRTDQALSILDEVGADNAFVQYDIYHAQRTEGEIASTLQKHLARIAHVQLADNPG
RNEPGTGELNYPFLFAHLDHIGYGGWVGCEYKPANGTEAGLGWLEKIAGKKAAVPA
>gi|319763769|ref|YP_004127706.1| glyoxylate carboligase [Alicycliphilus denitrificans BC]
MARMKAIEAAVCVLEKEGVSVAFGVPGAAINPLYAAMKAHGGIGHILARHVEGASHMAEGYTRAVAGNIG
VCIGTSGPAGTDMITGLYSASADSIPILCITGQAPRARLHKEDFQAVDIAAIAKPVTKWATTVLEPAQVP
RAFQQAFHLMRSGRPGPVLIDLPIDVQLAEIEFDIETYEPLPAYKPAATRNQAEKAISMLNEAERPLIVS
GGGVINADASALLVELAELLHVPVIPTLMGWGSIPDDHPLMAGMCGLQTSHRYGNATMLASDFVLGIGNR
WANRHTGSVDVYTKGRKFVHVDIEPTQIGRVFAPDYGIVSDAGAALKLFVEVAREWKAAGRLKDRSGWVA
ECQGRKNSVEYLRKTQFDDVPMKPQRVYQCMNRNLDKDTCYVSTIGLSQIAGAQFLHVYKPRHWINCGQA
GPLGWTVPAALGVRVADPERRIVALSGDYDFQFMIEELAVGAQFKLPYVHVLVNNSYLGLIRQAQRAFSI
DYCVQLAFDNINMDEGEASRGYGVDHVKVVEGLGCKAIRVHHPEDFAPAMRQAEAWMAEHRTPVVIECIL
ERVTNISMGTEIDNVIEFEELAHSKADVPSALALLD
>gi|319763770|ref|YP_004127707.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MDRLDAMQMFVRVVETGSFTRVAHEFTTTQPTVTKQIAAMEARLKVRLLNRNTRGVSLTEPGTLYYEKCK
AIVNDVADAESVVKVRQSQVHGQLRVGSSVAFGRRVVVPLALEFMQQNPQVQIDLSFEDRYTDLVASGID
VALRLGKLADSSLGARTLGVNPWVLVASPTYLKKHGTPRRPSDLKEHATLIYSSVQGNDLWRLRNASGEA
VSVPVTGRLRSNNLSALLAAARSHMGIAALPWYVAHESLKAARVVEVLKTCRLPEQEIHAVYPSPRLVPQ
KVQAFIAFLQGRFGKEWWEQLPREGSSKK
>gi|319763771|ref|YP_004127708.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC]
MQPNPIAWGAVLATLLHLPAIAQPQGTLEKVKASGAIVLGVREASAPLSYLLGSSQYVGYHVELCERIAK
NLFPQAQVRYQAVTSQNRMPLVQNGTVDLECGSTSNTASRKEQVDFANTTYITEARYAVKKSSGIESTGQ
LAGKTIVTTTGTTLVPRLRKLEREGLKFNLVMAKDHAESMLMVAQGRADAFAMDDNTLAGNIAMLQNPQD
FRIVGTPLGREPIALMLRRNDAAFKQAVDAEISKLIRSGELRAMYDKWFMSPIPPANVSLNLPFPPSLET
AFSQPNSDPAEAYAMP
>gi|319763772|ref|YP_004127709.1| aminotransferase class-iii [Alicycliphilus denitrificans BC]
MDTQLREAAKEFMVRYGGDTFPSLFRSAKGCVVTDDTGREILDFTSGQMCATIGHNHPAIVQAVQEAGEK
AYHMFSGMIPEVVARLAQTMARDWMPQGLSKSIFINTGSESNEVALRMAKMYTQGFEILAVGGSWHGVTG
AASAASFASDRKGYGVHVPGVFVMPEPNMYRPYIQGMDGEASALACLEIGLKMYDMASTGRRSAIIIEPI
ISAGGVLVPPKSYMQALRKAADERGMLLIFDEAQTAFGRIGHRHAADFFGVTPDIMAVSKTMGGGLPLAA
VSTTPEIEEDIHAKGFTFYTSHVSDPLPATVGLAVLRTIQQERLIERAQSMGAYLRRRLEELQSRYEAIG
DVRGEGMLLGVELVKSRETREPYHALGAITTQRCYELGLSMNIRRRPERGSVWRIAPPLTATQGEIDRGV
DILDEALRRSIDEIARNRLVPA
>gi|319763773|ref|YP_004127710.1| regulatory protein lysr [Alicycliphilus denitrificans BC]
METRWIQDFVTLADVRNFTRAAELRNVSQAAFSRRIQALEQWLGTALVDRTCFPLRFTEAGERFRASAVA
LLAQIDDVRAEAAGENANNNVKLAMPYALAATRLSPWWDDWSQGLDARLSVSTGNVLDTMQALSEGSVDL
VIGYLHAASPIAPDLSRHEHLLLDTEKVRPYSVAASATDRSPRFALPDTPGHPAPLLMYSPTVYFSRVVR
SILDAEGPSLHGPTVVESAMTDVLASMAEKGMGLAWLPDSCVAQGRFPSLVPAADARWCTHVDVVAFRLR
HNTRPVVERVWSRMAAA
>gi|319763774|ref|YP_004127711.1| hydroxypyruvate reductase [Alicycliphilus denitrificans BC]
MTETPQAPSANPQAFLLDLFRVAVQRAQPLHSMAAHLPPPPKGRTVVLGAGKAGGSMAQALEALWPQDAP
LSGLVVTRYHHVPPRPEGLAQRIEVVEAAHPVPDAAGLQAAERILALTQGLTEDDLVLCLISGGGSALLT
LPAEGLDLPGKQRINKALLESGAAISEMNCVRKHLSRIKGGRLAAACAPAKVVTLTISDVPGDDPSIIAS
GPTVPDASTCADALAILDRYRIEVPAAVRAALQTGALETPKPGDACFAGHEVHLIATPRQSLEAAAAAAR
AAGIEAHILSDEIEGESREVGKVHAALARAVAQRGQPFARPCVILSGGETTVTIRPQQPGIPRGRGGRAG
EFCLGMAQALQGQEGVWALAADTDGIDGVEDNAGARVAPDTFARAAAQGLRIGGYLDRNDAYGYFEALGD
LVVTGPTNTNVNDFRAILVL
>gi|319763775|ref|YP_004127712.1| hypothetical protein Alide_3102 [Alicycliphilus denitrificans BC]
MTTHRIHKRAFLGALALAAAGWASGAAAQAWPARPVSIIVPFPAGGTTDVLARALGQELSKTLGQPVVVE
NKPGAGATLGADYVAKAKADGYTLLMGAVHHTIATSVYKKLGYDFEKDLAPITTVALVPNVLVVNPQVPA
RTVQELLALARAQPGKLTYGSNGAGTGQHLIGAQFEGMSGAQLLHVPYKGSGPLTTDLLGGQIDMSFDTV
TPVLPHIKAGKLRALAVTTARRSVALPDVPTLDEAGLKGFDMGTWFGMLAPAGTPRDVVARLNADMVKII
HSPDFRRKMDDIGAVPIGDAPEQMARRIHDDTARFARLVKDAKVSLD
>gi|319763776|ref|YP_004127713.1| tartrate dehydrogenase [Alicycliphilus denitrificans BC]
MTKTYRIACIPGDGIGKEVIPAGQEVLQALAASQPGLAFEFTSYGWGGDWYREHGEMMPADGLQALRDKD
AILFGSAGDPHIPDHVTLWGLRLKICQGFDQYANVRPTRILPGIDAPLKRCAPGDLDWVIVRENSEGEYA
GVGGRVHQGHPLEAATDVSMMTRAGVERIMRFAFRLAQSRPRKQLTVITKSNAQRHAMVMWDEIAVQIAQ
EFPGVKWDKELVDAATARMVNRPATLDTIVATNLHADILSDLAAALAGSLGIAPTGNIDPERRYPSMFEP
IHGSAFDIMGKGLANPVGTFWSCVLLLEHLGEQAAAGRLMRAVEQVTADLQLHTGDLGGKATTRQVTDAV
CARLA
>gi|319763777|ref|YP_004127714.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MSPPSNAPSEMAFFSLLARLGSLSGAAREQGVSTAAASKRLAQMESRLGVRLVSRTTRRLHLTAEGETYL
RHARRILAEIDAMEQLVADMQSTPQGLLRVNATLGFGRSHIAPLVPAFVRRYPQIQLQLQLSVQPPPLAD
DGFDVCIRFGEPPDARVIARRLAPNRRLLCAAPAYLARRGTPARPADLQQHDCIDIRQGDDAHGVWRFAG
ARKHESVRLRNHLATNDGEIAVNWALAGLGLVMRAEWDVARYLRSGRLVQVLQDWQTPPADIHAVYPQRH
AATTRVRAFVDFVAEHFSAFTPNF
>gi|319763778|ref|YP_004127715.1| gntr domain protein [Alicycliphilus denitrificans BC]
METSTTGFIVESLTRAIVEHRLLPGTKLAEQKLADHFGVSRTLVRQALFQLSQNRLIRLEPARGAFVATP
SVEEARQVFAVRRMLEAEMVRAFMAQKTPAKIRALKAHIAAEQKAMEREDVGQRTELLADFHVRIAELMG
NEVLAQLLGELLSRCALITLMYQSTTAAAHSHEEHEAIVAALAGSDTAAAVLLMQQHLDNVEAGLTFDRD
LPTNDLSMALSAIAP
>gi|319763779|ref|YP_004127716.1| urate catabolism protein [Alicycliphilus denitrificans BC]
MTYDACSPYPRDLIGYGRTPPHPAWPGQARVAVQFVLNYEEGGENCVLHGDAASEQFLSEMFNPAAYPAR
HMSMEGIYEYGSRAGVWRLLREFERRGLPLTVFGVATALQRHREVAQAFHELGHEVACHGLKWIHYQDVP
EEVERAHMAQCMEIFGELYGHGGDHGLGWYTGRDSPNTHRLVADDGRFAYDSDYYGDDLPFWMKVQKTGG
GTHHQLVVPYTLDVNDMRFALPQGYSHADPFFQYMKDTFDVLYAEGDPAGDDAPKMMSIGMHCRLLGRPG
RITALQRFLDHVQRHDRVWVARRIDIARHWAQRFPQPAV
>gi|319763780|ref|YP_004127717.1| amidase, hydantoinase/carbamoylase family [Alicycliphilus denitrificans BC]
MTLTLEQLNAAPAAEAAALLDGLYEHSPWITEAALAQRPFRSMAHIKHALVQVLAQAAPEQQLGLIRAHP
ELAGKAMVSKTLTAESTNEQNKAGLTDCTPEEFARIQQLNADYNARFGFPFILAVRGPRGTGLTKKEIID
TFARRLSNHPDFERAEALRNIHRIAEIRLNDKFGYEPVLGNDVWDWQEKLSVHTDPGYAELGQLTVTYLT
DAHRACAQRISHWMRDCGFDEVEIDAVGNVVGRYRPAAESGKYLMTGSHYDTVRNGGKYDGRLGIFVPMA
CVRELHRQHRRLPFGIEVVAFAEEEGQRYKATFLGSGALIGDFKQEWLDQKDADGITMREAMEHAGLCIA
DIPRLRRDAAQYLGFVEVHIEQGPVLNELDIPLGVVTSINGGVRYVCEMTGMASHAGTTPMDRRRDAALG
VAELALYMEQRAAQDGDSVATIGMLQVPNGSINVVPGRCQFSMDMRAPTDPQRDAMVADVLARLEEIAQR
RGLQYKAELSMKAAAAPSAPEWQQRWEAAVQALGVPLYRMPSGAGHDAMKLHEVMPQAMLFVRGLNGGIS
HNPLESSTADDMQLAVDAFAHVLNQLAQETA
>gi|319763781|ref|YP_004127718.1| peptidase dimerization domain protein [Alicycliphilus denitrificans BC]
MSIYQRLDAWIDQHFDEQVQFLQALVRVPTDTPPGNNAPHAERTAELIQGYGFDAEKHAVPEADVKAYGM
QSITNLIVRRPYGQGGRTVALNAHGDVVPPGEGWTHDPYGGEIADGAMYGRATAVSKSDFSTFTFAVRAL
EAVARPAKGSIELHFTYDEEFGGLLGPGWLLEQGLTKPDLMIAAGFSYEVVTAHNGCLQMEVTVHGKMAH
AAVPHTGVDALQGAVAIMNALYAENTRYLQVTSRVPGIKHPYLNIGRIEGGTNTNVIPGKVVLKLDRRMI
PEENPAEVEAGIRAVIAQAVERFNAERGYQGGDAVRVDIRRLLLANAMTPLAGNKPLVDAIQQHGEAVFG
ARPPAVGTPLYTDVRLYVERGIPGVIYGAGPRTVLESHAKRADERIVLEDLRRATKVVARTLHDLLA
>gi|319763782|ref|YP_004127719.1| chemotaxis sensory transducer [Alicycliphilus denitrificans BC]
MILALLVVVTGIAMVKVERINGALRANSEEHVQVQRYAINFRGSAHDRSIAVRDVVLGSTSAERQKEIAT
IESLAAFYAASAGPLEKFVARPGAEPEMARLYADIRDIEAQAVATTRAIVAQAEAGDAAARETLWQQAKP
QYVQWLAAINRLIDFEEARIQAENRTALEQAGSFLTVQASLAAVVGKVRQASNAVITGSQEIAGGNAGLL
QRTEEQASNLQQAAASMEQMTASVKNNADSARQATQLAASASEAAHEGGAVVGQVVSTMHEITASSNRIV
DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAEAAREIKALIGSSVSKVEEGS
RLVGDAGATMTDIVTQAQHVAELIAQISNATVEQTEGIAQVGGVVTHLDRTTQQNAALVEQSAAAADALQ
QQAVSVFKLGSDAVAQAQVQPAAQPRPAVARPLPAAVKAQARPLAPRATPARLPEPGRGGQETSDAEWES
F
>gi|319763783|ref|YP_004127720.1| xanthine permease [Alicycliphilus denitrificans BC]
MSTNVHPVDEMLPMGRLTALGLQHVLVMYAGAVAVPLIVGRALNLTPDQVTKLISADLFCCGLVTLIQAL
GATQWFGIRLPVMMGVTFAAVAPMVSMAQATSGQAGAGLIFGAVIGAGVISILIAPLVSRMLRFFPPVVT
GTIIAVIGISLMRVGINWIFGNPVGPTAPSVVNPEYTKWLSEAQAMAGAPGSSLPPVPHGLKLMPTVPNP
KYADLSGVGISALVLVSILLIARFAKGFIANISVLLGIVIGAVVAAAMGLMTFEKVGKAPWLDIVLPMEI
ATPIFDPILILTMTLVMIVVMIESTGMFLALGEMTDRHISPEDLKRGLRTDGLGTLIGGIFNTFPYTSFS
QNVGLVAVTGVKSRFVCVAGGVILIVLGVLPKMGALVESLPTVVLGGAGLVMFGMVAATGIRILSAVDFK
TNRSNAMIVAVSIGVGMIPLVAPQFRQWMPHAIHPLIESGILLSSIAAVLLNVFFNGANGDTSAAVEAAR
QAEAH
>gi|319763784|ref|YP_004127721.1| malic protein nad-binding protein [Alicycliphilus denitrificans BC]
MTSPLSAAEQALREAALEYHRSPTKGKVSVAPTKPLSNQRDLSLAYSPGVAYPCLDIQADPTKAFDYTSR
GNLVGVITNGTAVLGLGDIGPLAGKPVMEGKGCLFKKFAGVDVFDIELDARDPDKIIEIVASLEPTLGGI
NLEDIKAPECFYIERELSKRMNIPVFHDDQHGTAIISSAALLNGLELVGKQIDKVKVAVSGAGAAAIACV
DVMVGLGVKREHIFMVDSKGVIYEGRPGGMDESKARYAQKTDARTLADVVHGADVFLGCSAPGVLTAEMV
KTMADKPIILALANPEPEIRPELAKAVRPDCIIATGRSDYPNQVNNVLCFPYIFRGALDCGATKITEAMK
LACVRQIAALAKENISEEVAAAYAGKELAFGPDYLIPTPFDSRLILKIAPAVAQAAAESGVATRPVADLE
VYRNSLTRFVYQTGMLMRPVINAAKAQPDAHKRVAYADGEDERALRAAQIAIDDRIARPILIGRPAVIAA
RIAKAGLRMQPGKDVEICDPSDDPRFRQYWEAYHQLMKRNGATPEMAKAAVRRSNTIIAALMVRLGDADA
MICGLVGTYETHLERIHNILGHAADAKQYAALNAVMTPHNGTLFIADTYVNEDPTAEELADIAWAAVQEV
QRFGLPPKVAFLSHSSFGSSKRSSARKMRAARDLFVARHPDIECDGELHGDAALEPRIRANYLQDSTLTG
AANLLICPNLDSANILYNVLKTTTSGGVTVGPILMGTAATAYILTPASTVRRVLNMTALAVVSSATRRQ
>gi|319763785|ref|YP_004127722.1| ycei family protein [Alicycliphilus denitrificans BC]
MRSTLLALAAAAALSAGAVHAEPATYAVDPTHTFATFEISHFGASVNRGRFDKKEGVVQFDKAGKAGKVE
LTLQIDSLTTGTLPFDKHLKSAEIFDVAQFPTARFVGDKFTFEGDKVTAVSGNLTIKGKTQPVTFKANQF
ACYDSPMLKREVCGGDFEATIDRTAFGVDYGVQYGFPKNVRIVAQIEAIKQ
>gi|319763786|ref|YP_004127723.1| ycei family protein [Alicycliphilus denitrificans BC]
MTCFRHYRTEHSTVTVSTLTRRAGLVLATAAALAGGPALAQQRLVSEQSEIAFVSKQMGVPVEGKFKKFD
AQVAFDPAKLATSKVAFTVDTGSATLGVRETDAELPKAVWFNVPKFPQATFQSSAIKAVGAGKYEVAGKL
SIKGASQDVVVPVTLTQSGATTTAAGSFVIKRLAFKIGENEWADTSMVADDVQVKFKLAFAGVPKL
>gi|319763787|ref|YP_004127724.1| cytochrome b561 [Alicycliphilus denitrificans BC]
MSSVITRPAARYGATAIALHWVLGLAIVAMLCMGWYMAGLPFSPQRLKLYNWHKWAGVAILALSVLRLVA
RLIRRPPPLPADVQSSMPRWQRLAHHGVHHLLYALFFIVPLVGWAYSSAAGFPIVFLGLVPLPDFVSPSP
ALADALKPWHALTAYALAALVALHVAAVVKHQFIDRDGLMARMLPGWGRCAAERA
>gi|319763788|ref|YP_004127725.1| hypothetical protein Alide_3116 [Alicycliphilus denitrificans BC]
MTPSNTPVVYGTEDVLISLCNSVTRVLSIATQGPVHYSGMVQRITKTCLKPDIGCFVLFDGGFSGLVIIN
FSAAAAMEIYERYMLSMGMSESDLAGSFTADEVGNVMGELMNQVVGDFTGKVRRELQTHITQNQPKMLVI
NQQVVLSVDANLDQPEARRVSFYTASNNIFYLELAIDRTQFVKLCDFEPQDAPDPDALMAEAAAAPAAAA
PAPSATDDDTQALLKSLGM
>gi|319763789|ref|YP_004127726.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen [Alicycliphilus denitrificans BC]
MAIVVNKPLPEFEANATGGIKVSNVSHQGQILILYFYPKDNTPGCTTEAMQFRDKFKDFEKAGAVVFGVS
RDNMKSHDDFKEKLELPFELIADTEEKMCHMFGVVKNKIMYGKKVKGIERSTFLVNPEGILVQEWRGLKV
PGHVDEVLKAVKTIKAPVKKAA
>gi|319763790|ref|YP_004127727.1| phoh family protein [Alicycliphilus denitrificans BC]
MPLPPAPTKRAALLKPEAYLLTAPQEEAQESAAAETAPPPRKRAKARAGGVTTAAPAAAKAAEVPGLPAK
AAAATQARGQPAQDRPAHDAAPAGASNVTPIRTAAAVAPRKRRATGPKKMFVLDTNVLLHDPTSLFRFEE
HDIFLPMIVLEELDAHKKGMTEVARNGRQASRTLDALAAAHGADDMAHGLRLDATGQRAATGSLFFQTAP
LSYQLPSSLPQGKADNQILGVVEALRKLHAPREVVLVSKDINMRVKARALGLVAEDYQNDKALEDGDLLY
TGSLALPPDFWTKAGRNVESWQSGAHMYYRIGGPVVSQLMINQFVYFEAPGEPSLYARVTEIRDKTAVLE
TLKDYGSAKNAVWGVNTRNREQNFAMNLLMDPDVDFVTLTGTAGTGKTLMALASGLTQVLDERRYTEIIM
TRATVSVGEDIGFLPGTEEEKMGPWMGALDDNLEFLAKGDGGNAGEWGRAATNELIRSRIKIKSMNFMRG
RTFLNKYVIIDEAQNLTPKQMKTLITRAGPGTKIICMGNLAQIDTPYLTEGSSGLTYAVDRFKGWPHSGH
ILLARGERSRLADFASEVL
>gi|319763791|ref|YP_004127728.1| aldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MTDSHTCLQQVLQALDLDLRAHEGTDLTIRAPRDGVVLASLASHTPEQAQAVVECAHRAYLDWRSVPAPV
RGELVRRLGGLLRRHKAALGELVSLEAGKIASEGQGEVQEMIDICDFAVGLSRQLHGLTIASERPGHRMM
ETWHPMGVVGIISAFNFPVAVWSWNAALALVCGNAIVWKPSEKTPLAAIACQHLLQRAIAEFEQERPGTV
PEGLSQLLIGGRDVGAVLAASTRVAVLSATGSVRMGRQVAVKVAERLGRAILELGGNNAMIVTPTADLEL
AARAITFAAVGTAGQRCTTLRRLIVHASVADALLARLERIYRSIAVGDPLQAGTLVGPLIDRAAFDAMQR
ALEQARAEGGQVLGGERVREDLGAHAWYVRPALVHMPRQSAVMERETFAPILYVVRYGGGTDEAIALQNA
VPQGLSSAIFTASLGDAERFMSAAGSDCGIANVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKGYMRRA
TNTINYSGALPLAQGVRFDV
>gi|319763792|ref|YP_004127729.1| replicative DNA helicase [Alicycliphilus denitrificans BC]
MTGIPAAASIPRLPSLESHSPMSAVLPDLIDGYAAAPPDREVAQLRVPPHSIEAESSVLGGLLLDNMAWD
RVGDLLVDGDFYRHEHQQIYSAIGALINASKPADVITVYEHLQGLGKAEETGGLAYLNSLAQYVPSASNI
RRYAEIVRERAILRKLVTASDEIATNAFNPQGRPVERILDEAEQKIFAIGEEGSRMKQGFQSLDSLVIDL
LDRVQEMADNPMDVTGVPTGFMDLDRMTSGLQAGDLVVLAARPSMGKTSFAVNIAEHVALNEGLPVAIFS
MEMGAAQLAVRIVGSIGRVNQGNLRTGKLSDEEWPRLTEAIERLRTVSLHIDETPGLTPSELRANARRLA
RQCGKLGLIVVDYLQLMSGSGSSSSDNRATELGEISRGLKMLAKELQCPVIALSQLNRSVEQRTDKRPMM
SDLRESGAIEQDADIIMFIYRDDYYNKDSKEPNIAEVIIGKQRNGPTGTVKLFFQKNQTRFENLAMGAGD
DY
>gi|319763793|ref|YP_004127730.1| ribosomal protein l9 [Alicycliphilus denitrificans BC]
MQVILLDKVVNLGSLGEIVKVKDGYARNFLIPSGRARRATEAAKAEFEARRAELEKAAAEKLAAAQAQGE
KLAGSAVKLTQKAGVDGRLFGSVTNGDIAEELNKQGYDLVKSQIRLPNGPIKTVGDNTITVALHTDVVVE
VTVSVYGETA
>gi|319763794|ref|YP_004127731.1| ribosomal protein s18 [Alicycliphilus denitrificans BC]
MATFKKFNKDKRPKRNTQSLLFKRKRFCRFTVAGVEEIDYKDVDTLRDFIAENGKIIPARLTGTRAIYQR
QLNTAIKRARFLALVPYSDQHKI
>gi|319763795|ref|YP_004127732.1| single-strand binding protein/primosomal replication protein n [Alicycliphilus denitrificans BC]
MNNHCALTACIAEAQPLRYTPAGLPALDLRLEHESLQHEAGAERQVKASVKAVAFGSLAERLARQALGSL
WTFRGFLATGRGGKGLVFHIQDIQQD
>gi|319763796|ref|YP_004127733.1| ribosomal protein s6 [Alicycliphilus denitrificans BC]
MRHYEIILLIHPDQSEQVPAMLERYKGMITAGGGQVHRVEDWGRRQLAYLINKLAKAHYLCLNIEADQAV
MAELEHAFKFNDAVLRHLTVQKKKAETGPSSMMKTVEREEARKASQAEFAATER
>gi|319763797|ref|YP_004127734.1| grpe protein [Alicycliphilus denitrificans BC]
MSDTQNQNPAPTPEEIEAALAANAADELARLQAELAELKAKSAELADQFLRAKAEAENARRRAEEEVSKA
RKFGIESFAESLLPVCDSLDAALSIESATAEQLREGSDATLRQLVGALERNKVVVINPASGAKFDPHQHQ
AISMVPADQEANTIVSVLQKGYLIADRVLRPALVTVAASK
>gi|319763798|ref|YP_004127735.1| chaperone protein dnak [Alicycliphilus denitrificans BC]
MGKIIGIDLGTTNSCVAIMEGNTTRVIENSEGARTTPSIIAYQEDGEILVGASAKRQAVTNPKNTIYAAK
RLIGRKFEEKEVQKDIDLMPFEIVKADNGDAWVQVRGQKLAPPQISAEVLRKMKKTAEDYLGEPVTEAVI
TVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAFGLDKQDKGDRKIAVYDLGGGTFDVSIIEIAD
VDGEKQFEVLATNGDTFLGGEDFDQRIIDYIIGEFKKEQGVDLSKDVLALQRLKEAAEKAKIELSNSAQT
DINLPYITADASGPKHLNIKLTRAKLESLVDELIERTIAPCRTAIKDAGISVSDINDVILVGGMTRMPKV
QEKVKEFFGKEPRKDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMITKNTTIP
TKFAQTFSTAEDNQPAVTIKVFQGEREIASANKLLGEFNLEGIPPASRGTPQIEVSFDIDANGILHVGAK
DKGTGKENKITIKANSGLSEEEIQKMVKDAELNAADDKKKLELVQARNQGEAAVHTVSKSLAEHGDKLDA
GEKEKIEAAVKDLEAALKGEDKAAIEEKTTALMAASQKLGEKMYADAQAAQQGAGADAAQASSAGTSAGA
AQDDNVVDAEVKEVKKG
>gi|319763799|ref|YP_004127736.1| chaperone protein dnaj [Alicycliphilus denitrificans BC]
MSKRDFYEVLGVPKNASDDELKKAYRKLAMKHHPDRNQGDAAKPAEEKFKEAKEAYEILSDPQKRAAYDQ
YGHAGVDPNMRGGMGGAEGFGGFAEAFGDIFGDMFGGGRGGRGGRQVYRGNDLSYAMEITLEEAAKGKDA
QIRIPSWESCDTCHGSGAKPGTSAKTCGTCNGAGAVQMRQGFFSVQQTCPHCRGTGKIIPEPCTACHGQG
RIKRQKTLEVKIPAGIDDGMRIRSSGNGEPGTNGGPPGDLYIEIRVRKHDIFERDGDDLHCQVPVSFITA
ALGGEIEVPTLSGKAAIDIPEGTQAGKQFRLRGKGIKGVRASYPGDLYCHIVVETPVKLTEHQRKLLREL
DESLKKGGGKHSPSTESWTDRLKSFFS
>gi|319763800|ref|YP_004127737.1| hypothetical protein Alide_3128 [Alicycliphilus denitrificans BC]
MKTIAALVLALASVGAQADVVITNTFNGTGIQPLGEPDTTTYGEVFTTPDAINTVLDSFSLILQSLNAST
SQLYAGVATWVNGGAGTSLFTSSVFSGNFTDWTEVVIGTGGLSLTPGQQYVAFFSASGLFDGSNALVQVG
LSDDANTLGMSWDNANGGSPLHPNWNGCQACSYQLAGTMEFSNPGNQVPEPGSMALLGLGLLGAAAARRH
SPAKARVPEQV
>gi|319763801|ref|YP_004127738.1| tryptophanase [Alicycliphilus denitrificans BC]
MPKTLIEPFRIKSVEPIRMTTRAERERLLEEAHLNIFKLRAEDVLIDWLTDSGTGAMSARQWGAIMEGDE
SYAGARSFFRLEKVIQDITGMAHFVPTHQGRAAEKVLFTAVCRKGDLVPNNCHFDTTRGNLEYMGVEAVD
VVIAEGLQPATIHPFKGNIDLDRAEALLKKEGGRIPFGMLTVTNNTGGGQPVSMANIRAYSALLKQYGKP
FIMDVCRFAENAMFIKMRERGYENTPVREIAREMFSYADGATMSAKKDGMVNIGGFIVLRSDEWLDEVRN
DLIMMEGFPTYGGMAGRDLEALAVGLEEGLQEDYLRYRLRTAEYLGERLEAAGVGFVKPTGGHAVYIDAR
TVLPDMPVQHYPAWALCNALYLEGGIRGVEIGSVMFGKRLEDGTETYHSMELVRLAFPRRMYTQSHFDYA
AEVIAEVKAKAAGIRGVRITRQPRFLRHFTCECAWV
>gi|319763802|ref|YP_004127739.1| peptidase u32 [Alicycliphilus denitrificans BC]
MVCGLRGNARTRTAPEPAVNALASPSSASTIDTAASAAPAAPELVCPAGSLPALKAAIDGGADCVYLGLR
DATNARNFAGLNFDEAAIQNGIAYAHDRGRKVLMALNTYPQATNPAPWRSALDRASAWGVDAIILADPGL
MRYASERHPNLRLHLSVQGSATNHDAINLYHAQFNIQRAVLPRVLSLEQVRQLVNRTSVEIEVFGFGSLC
VMVEGRCALSSYATGESPNTHGVCSPAKFVRWQETPQGLESRLNGVLIDRYGQGENAGYPTLCKGRFDVG
DESNYYALEEPTSLNTLELLPQLVKMGVRAFKIEGRQRSPAYVAQVTKVWREAIDHCMAQGHLYAPKTAW
MASLDQVAEGQQHTLGAYHRPWK
>gi|319763803|ref|YP_004127740.1| peptidase u32 [Alicycliphilus denitrificans BC]
MMDKPMMKLALGPLQYYWPRETVFEFYQAIGQTPVDIVYLGEAVCSRRHELRQSDWMDIARMLQGAGKEA
VMSTMVLLESTSDVADMHKIARDEEFPVEANDMGAVHNLAGKRPFVAGPQLNIFNADTLAWMASLGARRW
VMPLEMRQSDLAVLLKDKPAGLETEVFAYGRMPLAFSARCFTARHYNLPKDDCGFRCIEHPDGQLLQTRE
KEPFLVINGIQTQSARVHNLVLDIPALRAAGADILRLSPQSQHMDKIIAAFDAARRAERPDPATLANMRP
FMPEASCNGYWHGKPGLDLITPAPAIA
>gi|319763804|ref|YP_004127741.1| sterol-binding domain protein [Alicycliphilus denitrificans BC]
MNATPPAPFTLPRPVGAVLARLPAYPGSMLLVAAINFALARQLPQDVKDILQGKRLAIRVRDARLGFDFS
WNGQRFAPSAPQANPDLAISANAQDFLLLAQRRQDPDTLFFNRRLVMEGDTELGLVVKNALDALELPVLA
PSHWSPRAVLERKAPHLLRQLPPLPAFLKPRP
>gi|319763805|ref|YP_004127742.1| dgc domain protein [Alicycliphilus denitrificans BC]
MSASATDPAPEEDQPLVYSCSGCSSAAQLANHIAVQMDRRGMAEMSCIAGVGGDVPKLVRLARSGRPIIA
LDGCPLVCVRSSLARHRIAPARHYQLHEYGVKKRNHQDFDAAQAAEVLGRIEADLRDHPLRGGRA
>gi|319763806|ref|YP_004127743.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Alicycliphilus denitrificans BC]
MSTPKRIIVGISGASGAVYGARLLQALQGMEGVESHLVVSHAGWLNLRHELDMERAEVEALADHVHDLAD
VGASIASGSFAAHGMVVAPCSMRTLAAIAHGLADNLLTRAADVVLKERRRLVLLTRESPLHLVHLRNMAT
VTELGAICCPPMPAFYQRPTTIGEIVDHSVARALDLLGLDNDLAPRWQGLPKNS
>gi|319763807|ref|YP_004127744.1| ubid family decarboxylase [Alicycliphilus denitrificans BC]
MHYRDLRDFLAQLEAAGELRRIAAPVSPHLEMTALSDRVLRAGGPALLFENPTGHRMPVLANLFGTPARV
ARALGVAGLAEIRAFGEVLAQLKEPEPPRGMKDLWGRRDLVKTLWSMAPSTVRRPPCQQIVWEGGDVDLG
RLPIQHCWPGDVAPLVTWGLTITRGPHKARQNLGIYRQQLLSKNELIMRWLAHRGGALDFAEHCRQNPGK
PYPVAVALGADPATLLGAVTPVPDTLSEYQFAGLLRGARTEVAPAIGVPLQVPAQAEIVLEGHIHPDAGH
PSGWRHALEGPYGDHTGYYNECAEFPVFTVERITLREDAIYHSTYTGKPPDEPAMLGLALNELFVPLLQR
AFPEIVDFYLPPEACSYRLAVVRIKKAYAGHARRVMMGVWSHLRQFLYTKFIVVVDDDIDARDWKEVIWA
MTTRMDPVRDTMLIENTPIDYLDFASPVAGLGGKMGLDATNKWPGETQREWGRPMAMDADVRHRMDALAD
DLGL
>gi|319763808|ref|YP_004127745.1| cytochrome p450 [Alicycliphilus denitrificans BC]
MTTTPPQWDPQAPEVQRDQRAAYDQLRERCPLAHSESQHWSVLRHAEVMRVLDDHATFSSAVSAHPAVPN
GYDQPEHTAYRRALDPFFAPERMARFEPVCRALSGATVQEALALGGDLEITQEFALPFAVRVQSAFLGWP
TLLQDELLGWLRRSHAATRSGDRVQTSAVAREFEDLVERVRQARRDAPPTQDVSSELMHTRVDGRLLDLR
ELASVLRNWTVGEVGTIAASIGILMHWLASHPDWQQRLREQPALLPTAIDEVLRIDGPLVSNRRITTRAT
ALGGCPLPAGSRLSVNWIAANRDPRVFGDPDAFRMDRDPGLNLLYGAGIHVCPGAPLARLELRVLIEELL
ARTTRIVLAAGHAPARAVYPDAGYATLRMRLG
>gi|319763809|ref|YP_004127746.1| RNA-metabolising metallo-beta-lactamase [Alicycliphilus denitrificans BC]
MTVSLTFLGGAGTVTGSKYLVRHGGKALLVDCGLFQGYKLLRQRNWRPLPVEPHEIDAVLLTHAHLDHSG
YLPLLAKGGFGGPVFCTSGTRDLCAILLPDSGHLQEEEAAYLNRHHLSKHEPALPLYTRLDAQHSLSLLR
AQPARTPFEPLPGWRATFTRAGHILGAASILLEVGGRRILFSGDLGRPDDLLMCAPDAPPAADTVLVEST
YGDRSHPPGSVLDELGPALARLAARGGVAVVPVFAVGRAQTVLHAIARLKARGDLPARLPVYLDSPMAVS
TTELFEDHVGEHCLSHADLHAMARGTTLVHSVEESKALARLHGPRIILSASGMATGGRVLHHLALHAGDH
RNMIVLTGHQAGGTRGARIANGEKSIRILGRDVEIRAEVVQLATASAHADGNQVLDWLRAMPAAPRRVYV
VHGELPAADMLRQRIEYELHWPAEVPEHGDTVVL
>gi|319763810|ref|YP_004127747.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MKSSERSFARRIDLTSLQLFVAVCELGSIGRAAEREFIAASAVSKRLSDLEAAVDTALLYRHSRGVTLTP
AGESLLHHARAVLFGLERMQGELSEYAEGVRGHVRMHANISAIVQFLPEDLGQFARAHSQIKIDLQEHLS
PDVLHAVHEGAADLGICNLGGGNGAGGADLQSRPYRSDHLVLVVPQTHALSARESIQFDEVLDWDIVGLH
AGSSISLAMRQAAAQAGRPLRQRIQVTSLDAMCRMIDNGLGVGLLPDRAFALMRGVGQLAAVRLDEPWAR
RELRLVARDFDALPVTARLLVEHLAPTISPSP
>gi|319763811|ref|YP_004127748.1| 3-isopropylmalate dehydratase, large subunit [Alicycliphilus denitrificans BC]
MGRTLYDKIFDEHVVHTEEDGTAVLYIDRHLVHEVTSPQAFEGLREAGRKVWRVSSIVATADHNTPTTGW
ERGYDGIADPISKEQIVTLDKNIAESGAAAFFPFLSRRQGIVHVIGPENGATLPGMTVVCGDSHTSTHGA
FGALAHGIGTSEVEHVMATQTLLAKKARNMLIKVNGKVAPGITAKDIVLAIIGRIGTAGGTGYTIEFAGE
AIRDLSMEGRMTVCNMAIEAGARAGLVAVDDKTINYVKGRPLAPTGVEWDQAVQYWKTLHSDADAQWDAV
VELNAAEIVPQVTWGTSPEMVLGVDATVPDPDKEKDPSKRGATERALTYMGLEPGKPIADIFVDKVFIGS
CTNSRIEDMREAATVVKKLGQKVAKNVKLAMVVPGSGLVKEQAEREGLDQIFKAAGFEWREPGCSMCLAM
NADRLEPGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAAIHGHFVDIRKFA
>gi|319763812|ref|YP_004127749.1| entericidin ecnab [Alicycliphilus denitrificans BC]
MKPSFSVLLIGLALTLAACNTIKGIGQDVQSAGGAIERAAR
>gi|319763813|ref|YP_004127750.1| 3-isopropylmalate dehydratase, small subunit [Alicycliphilus denitrificans BC]
MQKFTIHQGLVAPMDRENVDTDAIIPKQFLKSIKKTGFGPNLFDEWRYLDKGEPGVPESQRKPNPDFVLN
QPRYKGASILLARKNFGCGSSREHAPWALDQYGFRAIIAPSFADIFFNNCFKNGLLPIVLPEATVDLLFN
EVAAFPGYQLTIDLERQVVIRPQGEEIAFDVVPFRKYCLLNGFDDIGLTLRHADKIRAFEAERLATKPWL
AHTMAS
>gi|319763814|ref|YP_004127751.1| 3-isopropylmalate dehydrogenase [Alicycliphilus denitrificans BC]
MKIAVLPGDGIGPEIVAEAVKVLEALDLKLEMETAPVGGAAYEVAGHPLPESTLGLAREADAILFGAVGD
WKYDKLDRPLRPEQAILGLRKHLGLFANFRPAICYEQLTHASSLKPELVAGLDILIIRELTGDIYFGQPR
GRRTAPDGHFPGAEEAFDTMRYSRPEIERIARVAFEAARKRSKRVTSVDKANVLETFQLWKDVVTEVHKD
YPDVQLDHMYVDNAAMQLVKAPKAFDVIVTGNMFGDILSDEASMLTGSIGMLPSASLNDKKQGLYEPSHG
SAPDIAGKGVANPLATILSAAMMLRFSLGQEEAARRIEAAVQKVLAQGLRTPDIHSEGTTRVGTVQMGDA
VVNALR
>gi|319763815|ref|YP_004127752.1| aspartate-semialdehyde dehydrogenase [Alicycliphilus denitrificans BC]
MSKQLVGLVGWRGMVGSVLMDRMQAEGDFDLIEPVFFSTSNAGGKAPAMARTHTQLKDANDVAELAKCDI
VITCQGGDYTKEVFPRIRAAGWKGHWIDAASALRMEDDAVIVLDPVNDGLIKSRLAAGGRNWIGGNCTNS
ILLMGLAGLFKADLVEWVSSMTYQAASGGGANHMRELLKGMGVIYGSVAGELATPASAILEIDRKVAATI
RQDVPTEFFGAPLAGGLIPWIDSQLPNGQSKEEWKGQAEVNKILGTPATIPVDGLCVRIGAMRCHSLALT
LKLKRDLPLAEIESLIKGGNPWVKFVANDKALTLQELTPAAITGGLQVGVGRVRKLNMGPEYVSAFVIGD
QLLWGAAEPLRRMLRILLGA
>gi|319763816|ref|YP_004127753.1| fimv n-terminal domain protein [Alicycliphilus denitrificans BC]
MSMNTLLPTARPTQSFVAHMHRWKFSALATAAILSAGLYGTDASALALGRVNVQSALGEPLRAEIELPQI
TAAEAESLRVAPARPEVFRSQGLEYSPAAGNVQIQLHRRADGSMVLRLSSTRPINEPFVDMVIDATWSSG
HVVRSYTMLFDPPATERAPATATTAPQLTAPRAETAPAAPRATAPAPAPRAAAPAPAAPAARPAPTVTPA
PSRPAVAAASGSGDEVRVRPGDTAGRIANAHRPASVSLDQMLVAMAQANPDAFVQGNVNRLRAGTVLRMP
SEADAQATPAVQARQIVAAQSRDFNEYRRRLASVAPRTQVAAAERSASGTVQAQVDESKPAAASPDKLTL
SKGGVQARKAEDQMARDKQADQDAARMAELSKNIAELNQIGGGATQAAAAAPGNAASAPGIAVPAPAALP
TPVQTTASAEAPAGATDAAGAAASEPAAAPPPKPAPQPAPQPAVPEEPSILDSLMEDPLRAGGALALILA
LLGYGGYRAAQNRRNRAATVDSSFEESRVAPDSFFGSSGGQRVDTASSDLSTGSSSMTYSPSQLDAGGDV
DPVAEADVYLAYGRDLQAEEILKEAMRHQPERVAIPAKLAEIYAKRQDRKALESAANDVFRLTNGTGPDW
ARVSDLGRTLDPENALYRPGGRPATAAGEQPGADSLPPPFPSTLNVAPPSASGPDSVLPALDLDLDLDLD
LHEAPAAPAPTPSAFAMAAAANEQAAHESAEAQPPETEAPAPVLDPELPGAAQAPETAADAAEPAPEEEA
SATGPLPLDFPEDALSLMDSSIAPLTSRDAKAPAVEPLDFDLGDLSLDLTGPGGLTASQPANTPADEPLP
DDPLATKLALAEEFNTIGDSEGARTLVEEVIAESSGELKARAQRLLATLS
>gi|319763817|ref|YP_004127754.1| tRNA pseudouridine synthase a [Alicycliphilus denitrificans BC]
MRVALGVSYNGQAYSGWQSQPSGNTVQDHLEAALGRFATQKVATICAGRTDAGVHGLMQVVHFDTGLQRA
PFSWVRGTNTFLPPDIAVQWAQPVPDAFHARACAVARRYAYVLLQSPVRPSVEAGRVGWVFHELDGQAMQ
DAVQHLLGEHDFSSFRASACQAKSPVKTLHRIAITRRGPANGPSLHGCAPCYWRFEFEGNAFLHHMIRNI
MGCIVAIGQGLYPPQWMRQVLDARSRDAAAPTFSPDGLYFLGPVYAPEWGLPTRTAAYDWLP
>gi|319763818|ref|YP_004127755.1| phosphoribosylanthranilate isomerase [Alicycliphilus denitrificans BC]
MSSPSPIRTRIKICGLTREQDVDAAVAAGADAVGFVLYAKSPRAVSPERAAALARRLPPFTTPVLLFVNA
QATEVIAASACVPGATVQFHGDETPEDCWAASDQGRIPFLRAARIPLGEDAARFDLVEYAQAHSHARAIL
LDAHVEGYGGGGKAFNWSLLPPSVDCHLVLSGGLTPANVADGILQVRPRCRTLAVDVSSGVEADGPDGSP
LKGVKDAGKIQRFIAAVRAADAAPASIS
>gi|319763819|ref|YP_004127756.1| tryptophan synthase, beta subunit [Alicycliphilus denitrificans BC]
MFEYHQPDASGHFGPYGGSFASETLTHALTELREAYARYQHDPAFLAEFQYELAHFVGRPSPVYHAARMS
REMGGAQIYLKREDLNHTGAHKINNVIGQAMLARRMGKPRIIAETGAGQHGVATATICARYGLQCVVYMG
AEDVKRQSPNVYRMKLLGATVVPVESGSRTLKDALNEAMRDWVANVDDTFYIIGTVAGPHPYPVMVRDFQ
SVIGKECLEQMPAMLAEQKIAAEQPDAVVACVGGGSNAMGIFHPYIPFENTRLIGVEAAGEGLDSGKHSA
SLQRGSSGVLHGNRTYILQDENGQITETHSISAGLDYPGVGPEHAWLQEIGRAEYVGITDKEALDAFHYL
CRTEGIIPALESSHAVAHAMKLAKTMTPQQSILVNLSGRGDKDIGTVADLSGADFYDRPSMRGHTVKGGP
AA
>gi|319763820|ref|YP_004127757.1| tryptophan synthase, alpha subunit [Alicycliphilus denitrificans BC]
MSRIADTFAALQEKGRKALIPYVTAGFPFADITPALMHGMVEAGADVIELGVPFSDPMADGPVIQKAGEK
ALSLGIGMPQVLEMVRSFRQRNQTTPVVLMGYANPVERYDQRHGKGAFARDAGAAGVDGVLVVDYPPEEC
EQFAADLRAHGIDLIFLLAPTSTPERMQQVARVASGYVYYVSLKGVTGSGALDTAAVESMLPRIREHVKI
PVGVGFGIRDAATAQAIGRVADAVVIGSRIIQLIEDQPHEKVVGITVDFLRGIRKALDA
>gi|319763821|ref|YP_004127758.1| acetyl-CoA carboxylase, carboxyl transferase, beta subunit [Alicycliphilus denitrificans BC]
MSWLEKLLPAKIQQTNPTERRQMPEGLWVKCPSCDNVLYKTDLEHNQNVCPQCGHHHRIGARARLNAFLD
GEGRYEIGQEVLPVDALKFKDSRKYPERLKEALENTGETDALIVMGGAVKSINVVAACFEFDFMGGSMGS
VVGERFVRGVETAIEQKVPFICFTATGGARMQEGLLSLMQMAKTNAALTRLAKKGLPYISVLTDPTMGGV
SAGFAFVGDIVIAEPKALIGFAGPRVIESTVRVTLPEGFQRAEFLQTKGAVDFICDRRELRQTVAQCLSM
LQRLPADAVA
>gi|319763822|ref|YP_004127759.1| hypothetical protein Alide_3150 [Alicycliphilus denitrificans BC]
MLFQILSFLLEVASGLLTGACLLRLYMQWQRVSFANPVGRLVFALSDWLVLPLRKLVPAAGRWDLSSLVA
AFLLQLVQYLLLWLLLGAGVGLAWLPWVAVFSLAHVAVSGLMGLLIVYAVLSWVQTRSALGDVIARLCEP
LLRPVRRVLPLVGGIDLSPLVLLVLLQVLSIVLGHLQASVMM
>gi|319763823|ref|YP_004127760.1| peptidase s16 lon domain protein [Alicycliphilus denitrificans BC]
MPQPLTLTSLPLFPLDTVLFPGGVLALRVFEVRYLDMVRKCRHAGAPFGVVALTAGHEVRRAGAPAEQFH
DMGTLAAIEQMQAPQPGLITLQCRGAARFRITHRSHLPHGLWVADVEQLPGDPHVPVPDDLQRTARVLAQ
VLASLHAREAGAGPHAVPTPEQLQDCGWVANRWCELLPLPADRKQRLMTLDNPLVRLELVGDMLERMGIF
L
>gi|319763824|ref|YP_004127761.1| polysaccharide biosynthesis protein capd [Alicycliphilus denitrificans BC]
MLMQALTWPRSIKRLVVVTLDLGLGLLAMWLAFSLRLDTLHWPEGLQWLVYLLGPAMAFPVFVHMGLYRA
IFRYNGIAALLTTGRAVTTYGALLLALLLLAKWEGVPRSVGILQPLILLLLIGTSRALGWFWLSGQTRNA
RHRLLIYGAGVAGAQTAAGLASARQYTLRGFVDDDPRKVGSSINGARVHGASALPALVEREGITDVLLAL
PSISHERRRDIIGHLSELPVRIRTLPSLTDLASGRVSVTDFQDLDIVDLLGRAPVAPDQELLERNLRGAV
VLVTGAGGSIGSELCRQILRAHPSRLLLVDHSEYALYGIHQELQAAVAAQQDGAAACCTLVPLLANVTDE
AHMARICREHQPSSIYHAAAYKHVPMVEANAAEGIFNNVFGTLSVVRAAVEHGARHFVLISTDKAVRPTN
VMGASKRIAELVLQAISACGRQPFGSARTPTRFSMVRFGNVLGSSGSVIPLFRRQIAAGGPITVTHPEVT
RYFMTIPEAAQLVLQAGAMAEGGDLFLLDMGEPIRIVDLARRMVALSGLTVRSDAHPTGDIEIRFIGLRP
GEKLYEELLIGDNPLPTAHPRILRAHEEHAPWSDMQPRLEALRRAALAGDTPAIMALLRQMVPGYQPAGP
ASP
>gi|319763825|ref|YP_004127762.1| polysaccharide biosynthesis protein [Alicycliphilus denitrificans BC]
MTLGLLRATLTLLAGSVLAHALPLLLGPALTRLYAPADFGQYALLWALATNLAVVACARYEFALPLEKSP
RRAALLMALCARLLLAVTAASTLLALALLWGQGQALAWLLPVGVLAIGATQWLTLWATRAQRFGLLSAAR
LVQQGGGALLQVLLGLLKTGPAGLLLGPIAAGLGAAWLLARPAPRGGWRRMWRQPLPRLKAMAARHRDFP
LYNTPHAFIGALQDTLTLLLIAAWAGDAAAGLWALALRYLKAPATLLGGALSQALYPQLVHARSADHARA
LVRRSMLALALLAAPLAAVLLLWGPGLFARAFGAQWEGAGALARGLALYIGLHFVASPLSVVTLAWRAQP
WALRLSLAGQAAFFAGLCAGLAWDGLQGAAWGVSAAMAAYFLYYFRALAFWSDIPHESPA
>gi|319763826|ref|YP_004127763.1| acetyltransferase [Alicycliphilus denitrificans BC]
MRALLNRWRRWLWRLLFFRMVFGEQGRAGRRLPHTRIAPSTCIEGAQGLDLADHVFIGQFNFLDATAGLR
IAEGVQVTNFVSIVTHSSHRSIRLLGRTYAGHAGDMPGYVRAPVEIGAYSFIGPHSVVEAGSRIGKGVVV
CAHSRVRGAVPDFAIVAGSPARAIGDVRTGDARLLAQHPELAAHYAAWAGELPRAEQEHG
>gi|319763827|ref|YP_004127764.1| glycosyl transferase group 1 [Alicycliphilus denitrificans BC]
MQPHLCLLGDANSPHTRRWATEMRARGWRVSLVTARPEPLDGVEQRILPPVRRQADWLLRAGAARRHVHE
LAPDIVHAHYLTSYGYLAARCGRHPLAMTAWGSDLLVTPHRSPWMRWLTGWILRRADLVTGDSASLVEAA
RQYRPRAPVHEIHWGVDRARFAPVPWGDKDGLQIVSLRAWEPNYHIGTLIDACALLRQRLPGAPLTLHLL
GGGSLEPALRARVQEQGLAQCVVFHGRLDDAGMAAVLARCKISVSVPESDATSVAMLESMACGLAVVASD
LAANRQWIAPDLLVPAGDAHALAGVLQQLAEDDARMRGIGTRNAERIALDGDRKAQMDQVDRLYRQLLK
>gi|319763828|ref|YP_004127765.1| glycosyl transferase family 2 [Alicycliphilus denitrificans BC]
MTPTSVPRLLSVIAPCRNEAAFIDAFCGSVLRQQLPEGWRMEVLIADGQSDDGTRERLLERCAADPRLLL
VDNPDRIVSTGLNACIAHARGEVIARLDIHTRFAPDYLARCIEALERSGADNVGGPWVAQGTGPMGEAIA
AAFQCRWVVGGARSRDRSYEGEVDTVYLGCWRREAFARFGLFDEALVRNQDDEHNLRLRMAGGRIWQSGA
IRSVYHPRNSLRHLLAQQRQYGYWRPFVVRKHGQPGSWRQLVPALFVAALALAALLLPWTPWPAAALLAL
YGSYLALASVAAARAAGAWRLLWRLPAVIAAFHIGYGWGTWCGLWDVLRARAPSSRFARITR
>gi|319763829|ref|YP_004127766.1| methyltransferase type 11 [Alicycliphilus denitrificans BC]
MNQPETRAVQARYARRDSEADALRYSLYANAAALQAQQERLRAMARIWRAHGWSGLAGRPLLEVGCGSGG
NLLDLLRLGATPRQLTGIELLPDRADAARTLLPEGVRILQGDACAAAIPDASQQAVLAFTVFSSLLDADY
RQQFARQLWRWVMPGGGVLVYDFVIDNPHNHDVRGLPLAELRALFPGARLHSHKLTLAPPLARRLPAALI
TAAALLPALRTHRLTWAVKPT
>gi|319763830|ref|YP_004127767.1| degt/dnrj/eryc1/strs aminotransferase [Alicycliphilus denitrificans BC]
MTMPDATPPFLPFARPDIGDAEIAAVTDALRSGWVTTGPKARAFEEAFTAYLGGDGLQSIAVNSATAGLH
LALEALGIGPGDEVIAPTLTFTATVEVVRYLGADPVLVDVDPVTLNIDPEAIRAAITPRTKAIMPVHYGG
LACRMDAILSIAREHGLKVVEDAAHALPTTWQGALVGRLASDATVFSFYANKTITTGEGGMAVTRDPRLA
ERMRVMRLHGMSRDAFDRFTSKTPAWYYEVVAPGFKYNLTDIAAALGLVQLQRLPRFLERRQHLARRYHA
ALAGLPLVLPADAPAGDVHAWHLYVVRLAAGARLSRDELIQALSERGIGTSVHYVPLHRHPYWRDRYRLA
PEQFPHADTAYRAMLSLPLFTAMHDAEQDRVIAALHALLG
>gi|319763831|ref|YP_004127768.1| sugar transferase [Alicycliphilus denitrificans BC]
MGKRLFDIVFAALALLLLCPLLLAVALWVRLDSPGPALFRQQRVGRGGRPFHIYKFRTMRLDAEAAGPQI
TVGADARITRAGAWLRRAKVDELPQLLNVLRGDMSVVGPRPEVPRYVALYPSDVRETVLGVRPGITDLAS
IAFRDESSLLARSADPERTYVEQILPAKLLYAQRYVRTRSLWLDLRIIAWTILAVLGRPGAPRHSPKP
>gi|319763832|ref|YP_004127769.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MSEHNHAPSLPQDENQLIAERREKLKALREGQAQGQSVAFPNDFKPQNHAASLQQRYGALDAEALEAQDV
AVSVAGRMMLKRVMGKASFATLQDGSLGETGGRIQLYVTRDGVGEDVYADFKRWDLGDIVGAEGTLMKTK
TGELSVKVTRLRLLTKSLRPMPDKFHGVADQEVKYRQRYVDLMTDEAARRRFVARSKAIGGIRAFMIEHG
FLEVETPMLHPIPGGANARPFVTHHNALEQEMFLRIAPELYLKRLIVGGFERVFEINRNFRNEGISVRHN
PEFTMMEFYAAYWNYRDLMDFTEELVRDAALKATDTLQLTYGGRAVDLSQPFARLTIREAIYQYTEAGAH
VDDAAWLVSALKKLGMTEEKDRLSTRSLASLQVLYFEEEVEDKLWQPTFIMEHPTEISPLARANDLRPEV
TERFELYITGREFGNGFSELNDAEDQAARFNAQVAAKDSGDDEAMFFDHDFVRALEYGMPPTGGCGIGID
RLMMLLTDSPSIRDVILFPALRREQ
>gi|319763833|ref|YP_004127770.1| mscs mechanosensitive ion channel [Alicycliphilus denitrificans BC]
MSPMLERLKTILPPWAHDWLDVIVPGMQIALIVLAALLLHYIVRRLIRRASDHYQFPHELLTPVNAVVRW
LILGGAALLALERLGVSAAVLWTAFTGFATVGAVAFFAAWSVLSNLFCAFLILTVGPFRVGDHIELLDTA
EKPGALGRVLDINLLYTTLEDATAPEPGTLLQIPNALIFQRVVRRWRAGMPVPPSKLHSEATPAAGAAES
APAPKAASFP
>gi|319763834|ref|YP_004127771.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MSIPFRMHTVVAALGLASAALLSTAHAQVKIAMVVPATGPVTQYGDMVKEGVNTAVEQANAAGGINGKKI
ELVVVDDACEPKQGPVAANRVVNDKIHYVVGPVCSGAAIAAAPIYNNEGVVVVTPSATSPALTEGKNYHF
IFRTIGRDDQQGPAAAKFIIEKVKPKKVAVLHDKQSYGQGIAASVRDDLKKAGINVALFEGINAGDSDYS
AVITKLKSAGVDFVYYGGYHPEMGLLLRQAGEQGLKVKMMGPEGVGNPEVNAIAGPAVEGMLLTLPADFS
TNPKNAAIVKAFKDKKRDAGGAFQMTAYAAAQVIIDSIKAVGDNPTKVADHMHKTTFETPLGAIGWNKNG
DLKSFDFQIFEWHKDGSKSVAK
>gi|319763835|ref|YP_004127772.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MSEFLPQLLQQLFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYAGLVTLAAIGTQSGLPVA
VIIALMLLVAVLVTGVYGFVVEQVAYKPLRNGPRLVALISAIGMSIFLQNWVALGQGARDMAVPSLLPGA
LRFGDESGFEVFVPYTRVLIIVVTVVLMIALTLYIRHSRMGRASRACSQDMHMAGLLGIDVNRVISFTFI
LGAVLAAVGGVLIALAVGKLNPFIGFIVGVKAFTAAVLGGIGSIPGAMLGGVLLGVAETFAAAYISSEYK
DIVAFGLLVLILLFRPTGLLGKPEVEKV
>gi|319763836|ref|YP_004127773.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MSAAISSSARPGWRQNLAHALTATVLTAVVVTPIFGLHLERAGVRTIIAQHWSNVAWACLLVFIAQMLRP
LLAGRGVRLPWPKLPAIPARQRGVWITAALLLAVIWPFFAGRNAVDIATLAMIYVMLGLGLNVVVGFAGL
LDLGFVGFYAVGAYTYALLFHWAGWSFWEALPLAGAASALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRL
LLVNLTDFTGGPDGISGLPKPSMFGLEMTRSPSAEGATTFHQFFGLEFNSMHMVIFLYLMALLLAVVTLF
ISNRLIRMPIGRAWEALREDEIACRSLGLNPMKIKLSAFTLGAMFAGFGGAFFAARQGIVNPESFTFIES
ALILAIVVLGGMGSQLGVILAAILLTVLPEFAREFAEYRMLIFGLVMILMMVWRPQGLLPMQRHHVEVK
>gi|319763837|ref|YP_004127774.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MAAGNSFLHVDGLSMRFGGLLAVDGIAFDVKEREIFAIIGPNGAGKTTVFNCISGFYRPTTGNIRLQGQD
IAGQGSHSVALNGLVRTFQNVRLFKHMTVLENLLVAQHRHLSTNLLSGLFKTRSYRESEQKALENALHWL
DYMGLREFVNREAGNLAYGHQRRLEIARCMVTKPRVLMLDEPAAGLNPQEKKDLQGLIEKLRQEYGVAVL
LIEHDMSLVMGVSERILVMEYGRPIALGTPDAIQKDERVIKAYLGEE
>gi|319763838|ref|YP_004127775.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MQAMLEFKGISTHYGAICAVNNVSLHVNKGEIVSLIGSNGAGKTSLLMTLCGNPRASGGQVLFEGEDITN
TPSHLIMRKGIAISPEGRRIFPALTVVENLQMGGFFQSKDAIAEGMEHVFRLFPRLKDRASQRAGTMSGG
EQQMLAIGRALMSKPRLLLLDEPTLGLAPLIIAQIFEIIQEIRAQGVTVFLVEQNANRALSIADRGYVLE
TGRLVLEDTGANLLTNADVRKAYLGA
>gi|319763839|ref|YP_004127776.1| phosphofructokinase [Alicycliphilus denitrificans BC]
MNMRIGVLTGGGDCPGLNAVIRAVTKSLIQHGHGKGVEVLGILDGFEGLMGDTPRARPLVWDRVSGILHM
GGTILGTSNSANPLKDEATLEQVRRNVRALGLDVVVAIGGDGTMSLAHGLQKIGLACVGVPKTIDNDIAL
CERSFGFDTAVATATDALRRVESTANSHHRVMIVETMGRHAGWLALESGIAGAADVILLPEIDYDLQAII
DRCREREQRQRYTIICIGEGAKPRGGEITVRERVAGSPDPVRLGGVGHVLRQQLQPHLKSEVRTTVLGYV
QRGGDPTPFDRVLATRFGHHAAQLVIAGQLDRMVTLQDGRIGSVEIARVANTQRKVPPNHDLITMARDIG
VCLGD
>gi|319763840|ref|YP_004127777.1| glycoside hydrolase family 3 domain protein [Alicycliphilus denitrificans BC]
MTEHAPLIIDVAGTQLSADDRRRLAHPLVGGVILFARNWQDRAQLLALTAAIKAVRHDLLICVDHEGGRV
QRFRTDGFTHIPPMRAFGELWMNDGKAGQGSGALRAMEAATAAGYVLGSELRACGVDFSFTPVLDLDWGE
SGVIGDRAFHRDPRVVAMLARALMQGLLQAGMANCGKHFPGHGFVRADSHTEIPVDRRSLKAILQDDAAP
YPWLSTVLTSVMPAHVIYPKVDGRPAGFSARWLQDILRGRLRFDGAIFSDDLSMEGARRIDGQVVGYTDA
GVAALNAGCDLVLLCNQSLGDGQAVDELIAGLADAQAAGRWQASRASEARRQALLPETLPQPWDDLMVQP
AYMHALDLLP
>gi|319763841|ref|YP_004127778.1| holo-acyl-carrier-protein synthase [Alicycliphilus denitrificans BC]
MIYGIGTDICDVRRIRDSLARHGDRFAEKVLADGELATWRARGARWPERGVRYLATRFSAKEAFSKAIGL
GLRMPMTWRHCEVAKLASGQPTIVLHGALKDWFEARGLRCHLSVTDESDYAASFCVVEKD
>gi|319763842|ref|YP_004127779.1| pyridoxal phosphate biosynthetic protein pdxj [Alicycliphilus denitrificans BC]
MTSLPRTALSVNVNKVALVRNTRHLGIPSVTRAAQLCLQAGAQGITVHPRPDERHIRAQDVHELAALLKQ
WPQAEFNIEGNPTHNLMEFICQVLPAQATFVPDSVGQFTSDHGWRFPEDAERLAPLVAECKALGVRVSLF
MDPVPEQMAAARAVGADRVELYTEPYAAAWGTPRQSAELARYRDAAQAALDAGLGVNAGHDLNRDNLADF
LAAVPGVLEVSIGHALIADALELGYGDTVRAYQRCIDQGMLERDS
>gi|319763843|ref|YP_004127780.1| DNA repair protein reco [Alicycliphilus denitrificans BC]
MATRRIVDEPAYILHAYDWSESSLILDVFTCHYGRVALVAKGAKKPTSNFRPVLLPLQPLRLAWGLAGEV
GQGEIHTLKAAEWVGGHVLPTGDALLSGLYLNELLLRLLAREDTHAQLFDLYAGVVRVLGSGAHGEALEP
VLRAFELLLLREIGLLPALDAEPATLGALAPQSRYALVAEGGLRAAAHGERAALTGAQWLVLQRALEQGY
TAVLRAVAGAGAPATGELKAQLRALLQYHCGSPLLRTRQLMMDLQSL
>gi|319763844|ref|YP_004127781.1| gtp-binding protein era [Alicycliphilus denitrificans BC]
MLAAARAGGSAAGDAAGQRCGLIAIVGKPNVGKSTLMNALVGQKISITSRKAQTTRHRITGIRTRGQTQF
VFVDTPGFQTRHSTALNKSLNKTVMGAIGDVDLILFVVEAGSFTLADAKVLSLFKPGIPTLLIANKLDTV
HRRAEIAPWLKGMQERHPFAEFVPMSAKNKGDIERLFGICEKYLPEQPWWYAEDELTDRSEKFLASETVR
EKLFRFTGDELPYTSTVVIDKWDEEKSKQYKRFIRIAATIVVERDGHKAMVIGEKGERLKRISTEARQEL
EKLLDAKVFLEVWVKVRSGWADDEARVRSFGYE
>gi|319763845|ref|YP_004127782.1| ribonuclease iii [Alicycliphilus denitrificans BC]
MPPDSLPALQQRLQHMFSDPSLLQRAVTHRSFSADHNERLEFLGDSVLNLAVSSLLFKRMQGLPEGELSR
VRALLVRQESLHGIAVRLQLPQVLRLGEGESRSGGKMRPSILADALEAVIGAVYLDAGYEQAQALVHRLF
EGVELSPRLQEAAKDAKTALQEWLQGRKMSLPQYRVVQTTGVAHKQVFHVACEVPALQLAERGSGASRRA
AEQAAAAAMLAQLKAKHA
>gi|319763846|ref|YP_004127783.1| transmembrane protein [Alicycliphilus denitrificans BC]
MGLQRTAARSRQRGLSFIGVIFVGVLAVAAFAIGGQSVPVFIEYAAIKKAATKAAREGSTVPEIRAAFDR
AAQIDDIHSISGQDLEITKRNDKVVVSFSYSREIPLAGPAYLVYRFKESTN
>gi|319763847|ref|YP_004127784.1| signal peptidase i [Alicycliphilus denitrificans BC]
MQAMQYITGAVLAAFVGYIGAWYVGAIEGNFALLLFLATVVTGGYWLAERLVFLPRRRKAAQALEDAAAR
RRAELDRMGIQKVDGDVEEAKGRILMQPWWLDWTAGLFPVIAVVFLLRSFLFEPFKIPSGSMIPTLLVGD
LILVNKFTYGLRLPVLNTKITQGKPIERGDVVVFRYPPQPSMDYIKRVVGLPGDEVAYLNKRLTVNGQSV
PATALPDFFDRDAMRYFKQFEEQLGTHRHRILNNPEMPAFVQGASNYQFRDQCRYSVEGVACTVPEGHYF
MMGDNRDNSLDSRYWGFVPDANIVGKAFFVWMNFGDLKRIGSFN
>gi|319763848|ref|YP_004127785.1| gtp-binding protein lepa [Alicycliphilus denitrificans BC]
MNHIRNFSIIAHIDHGKSTLADRIIQRCGGLAEREMEAQVLDSMDIEKERGITIKAQTAALQYKARDGQV
YNLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTALDLGVEVLPVLNKMDLPQADP
ENAKAEIEDVIGIDASEALPISAKTGMGIDDVLEQIVAKVPAPRGKPDAPLRAMIIDSWFDSYVGVVMLV
RVVDGELKKGERFKMMATSAAYEANQLGVFTPANVQRDALRAGEVGYIIAGIKELKAAKVGDTITLEKKL
PNNAGPATEALPGFKEIQPQVFAGLYPTEANQYDALRDALEKLQLNDASLHFEPEVSQALGFGFRCGFLG
LLHMEIVQERLEREFDQDLITTAPSVVYEVVKGDGEVIMVENPSKMPDQGRIQEIREPIVTVHLYMPQDY
VGPVMTLANQKRGVQMNMQYHGRQVMLTYELPLGEIVLDFFDKLKSVSRGYASMDYEFKEYRASDVVKVD
ILLNGEKVDALSIIVHRTQAAYRGRAVAAKMREIISRQMFDVAIQAAIGANIIARETIKALRKNVLAKCY
GGDITRKRKLLEKQKAGKKRMKQIGSVEVPQEAFLAILQVED
>gi|319763849|ref|YP_004127786.1| protease do [Alicycliphilus denitrificans BC]
MMSRIEWKQGLQSCVLAVVVVLAGGTGLLAGASAAHAQSAPALRGLPDFTELVEQVGPSVVNIRTMEKVA
ARPSIDGMDEDMLEFFKRFGLPVPNIPRQQGPRRQQPEEQPRGVGSGFILSSDGYVMTNAHVVEGADEVV
VTLTDKREFKAKIVGADKRTDVAVVKIDATGLPAVRVGDVSRLKAGEWVMAIGSPFGLENTVTAGIVSAK
QRDTGDYLPFIQTDVAINPGNSGGPLINMRGEVVGINSQIYSRSGGFMGISFAIPIDEAMRVSEQLRTSG
RVTRGRIGVQIESVSKEVAESIGLGKSQGALVRGVEPGSPAEKAGIEAGDIITRYDGKTVEKVADLPRLV
GNTKPGTKTSITVFRRGATRDLTITIAEVEPDEKAVAKAAEGNGKGKSPSVAAQQLGLVVAELTPAQAKE
LKIKGGVRVVSAEDAAARAGLRADDVIVALANLEIRNLKDFEAALAKADKSKPVNVLLRRGEWAQYVLIR
PAR
>gi|319763850|ref|YP_004127787.1| mucb/rseb family protein [Alicycliphilus denitrificans BC]
MVGCMLMAAAPATRAHEAGAAAPGEARESMDVAAWIGRMRQAALERNYSGTFVVLSAHGAMASYRIWHAC
DGQRQIERVEALSGTPRIVFRRDGEVRTFLPQERVVRSEMRQAPGSFPGVPAASGAQPARHYMVRMGRPE
RVAGLDADMLDFVPRDAWRFGYRVWIDRASGLLMKMQTIDGDGRVLEQSAFSELTMGVPLGLQSMARMMA
DVAGYRLVTVPTQPTTAQAEGWTLDESVAGFAPQGCYRRHGLAPAEPARPVVQCIYSDGMATLSVFMEPY
SVRRHPLTEQVASMGATQVLAQKVSGDTWVTVVGEVPQRTLRYFMQTMRRGR
>gi|319763851|ref|YP_004127788.1| anti sigma-e protein rsea family protein [Alicycliphilus denitrificans BC]
MAGDSMNDDARMREHLSALADGELQGEAFAQAVAYAATEEGESAWRIYHLIGDTLRSSEVTYVADPAFLG
RLREQLALEPRHAGVATAQPLVQVAPAPREAAPHAQDAAANASVFRWKLAAGFASLAAVAALGWNAYLGL
GGTAPQGAQLAAAQPPAEAVAPAFVATAGGPQGQQIMIRDPRLDELLAAHKQFGSTSALQMPAGFLRNAT
FEAPAR
>gi|319763852|ref|YP_004127789.1| RNA polymerase sigma factor rpoe [Alicycliphilus denitrificans BC]
MTAPSPAPPDSADSDLRLVERTVAGDQRAYELLVIKYQRRIERLVGRMVRDVDLIPDITQETFLRAYRAL
HQFRGEAQFYTWLYRIAVNTAKKALVDIKRDPVISESSLRGGGDEEDETSLLDRELTSDETPETVLAAQE
VAAAVNAAMEALPEDLRQAVTLREIEGLSYEEISVAMACPIGTVRSRIFRAREAISAKVKPLLEKQSGKR
W
>gi|319763853|ref|YP_004127790.1| hypothetical protein Alide_3181 [Alicycliphilus denitrificans BC]
MRAPLHAPAVRYPCGRSPAVGWALAIVAATALAGMAAWLELGTADADMAVKAAAGLGLWLSCTAAAWLWW
RRMPMGHLAWDGGQWLLDCGAPGPDPVQGKPHVHLDLQGCLLLSVRLLRGRPSWLWLERRSDPVQWAALR
RAVYSPARSKAPDPAEATDAAPPALDGGVTTKT
>gi|319763854|ref|YP_004127791.1| 3-oxoacyl-(acyl-carrier-protein) synthase 2 [Alicycliphilus denitrificans BC]
MSRRRVVVTGLGCITPVGNTVADAWANILAGKSGIDLITKFDTTNFACRIAGEVKGFDLESYISAKDART
MDSFIHYGIAAAQEAVRDAGLPTGEALDEELATRIGCIIGSGIGGLPLIENTHAELTSRGPRRITPFFVP
ASIINMVAGHVSMRFGFKGPNLSVVTACTTGLHCIGEGARKIEYGDADVIVAGGTESTVSPLGVGGFAAM
RALSTRNDDPKTASRPWDKDRDGFVLGEGAGVLVLEEYEHAKARGARIYAEITGYGMSADAGHMTAPNMD
GPRRAMQAALRNARLNADQVDYLNAHGTSTPLGDLNETNAIKAALGDHAKKMVVSSTKSMTGHLLGGAGG
IESVFTVLALHHQKVPPTINIFTQDPECDLDYCANTARDMKMDVALKNNFGFGGTNGTLVFQRV
>gi|319763855|ref|YP_004127792.1| acyl carrier protein [Alicycliphilus denitrificans BC]
MSDIEARVKKIIAEQLGVEESQVTNEKAFVADLGADSLDTVELVMALEDEFGIEIPDEDAEKITTVQNAI
DYANTHQKA
>gi|319763856|ref|YP_004127793.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Alicycliphilus denitrificans BC]
MSETTPQIALVTGATRGIGAAIAAELAGRGLRVIGTATTDEGAERITQVLAAWGGKGVKLNVTDGAAVDA
LVDAIVKEHGGLHVLVNNAGITRDTLAMRMKDDDWDAVLDTNLKAVFRVSRAAIRPMMKQRFGRIISITS
VVGASGNPGQANYAAAKAGVAGMTRALARELGSRGITVNCVAPGFIATDMTADLPEEQKKALKSQIAMGD
LGQPSDIAHAVAYLASAGAGYVTGQELHVNGGMYM
>gi|319763857|ref|YP_004127794.1| malonyl CoA-acyl carrier protein transacylase [Alicycliphilus denitrificans BC]
MAKTFAFVFPGQGSQSVGMLDAWGDHPVVAETLREASDALGEDVGALIHSGPKEALALTTNTQPVMLVAG
VAAWRAWRAEGGALPAAVAGHSLGEYSALVASGALTLAQAAPLVRLRAAAMQEAVPVGAGAMAAILGLDA
AKVIAGCAEATASFGAGSPEVVEAVNFNDPAQTVIAGTKAGVDKACEVLKAAGAKRALPLPVSAPFHSSL
MKSAAEKLRTALAALELAAPQIPVINNVDVAVQQDADAIRDALYRQAFGPVRWVECVQALKARGVTHVIE
CGPGKVLAGMTKRISPELIGASLSDPATLAETKELLA
>gi|319763858|ref|YP_004127795.1| 3-oxoacyl-(acyl-carrier-protein) synthase iii [Alicycliphilus denitrificans BC]
MRRYSRITGTGSWLPPRRVTNDDLVAQLAGQGIETSDEWIVERTGIRARHFAERDVASSDLALEASRRAL
EAAGREAQDIDLIIVATSTPDMVFPSTAAILQHKLGITNGCPVFDVQAVCSGFVYALTVADAMIQSGAAS
RALVVGSEVFSRILDFHDRTTCVLFGDGAGAVVLEASDTPGILASELHADGSHVGILCVPGNVCGGQVLG
DPLLKMDGQAVFKLAVGVLEKAARAALDKAGLKDADIDWLIPHQANIRIMQSTARKLKMSMDKVVVTVDQ
HGNTSAASIPLALDHAVRCGQVRPGQIVMLEGVGGGFTWGAILLKM
>gi|319763859|ref|YP_004127796.1| fatty acid/phospholipid synthesis protein plsx [Alicycliphilus denitrificans BC]
MITLAVDCMGGDHGPGVTLPACRQFLAHHPEARLLLVGQPASLQGLAHERAAVVAASEVVSMDDPVEVAL
RRKKDSSMRVAIQQVKDGAAQAAVSAGNTGALMAIARYLLKTLDGIDRPAIATQMPNERGGATTVLDLGA
NVDCSAEHLLQFAVMGSALVSALKNTDAPSVGLLNIGEELIKGSEIIKKAGELLRSAANSGDLNFHGNVE
GNDIFKGTVDIVVCDGFVGNVALKASEGVASMIVGALKQEFSRGILTKMAAIVAYPVLSALMRRMDHRRY
NGAALLGLRGLVFKSHGSADVLAFEQALNRAYDAARNNLLDRVRARVAHAAPLLTAAGAQTAS
>gi|319763860|ref|YP_004127797.1| ribosomal protein l32 [Alicycliphilus denitrificans BC]
MAVQQNKKSPSKRGMHRSHNALTTPGTAVEPTTGETHLRHHISPNGFYRGRQVLKNKSEA
>gi|319763861|ref|YP_004127798.1| hypothetical protein Alide_3189 [Alicycliphilus denitrificans BC]
MTKEHSPDRLDVKAFAQAGAHLSGHDTLLKYQRLAEEAKGLHPDLRVDWMADGELRTTQGVGGQVWLRLK
ANATLPMICQRCLQPVDVPLEVDREFRFVADEATAEALDSDSEEDLLALSREFDLRELIEDELLMALPVV
PRHDECPTEVRMASSDEDFKEASVQKPNPFAALAGLRKGKPGG
>gi|319763862|ref|YP_004127799.1| maf protein [Alicycliphilus denitrificans BC]
MPESPPLPRSLVLGSTSRYRRELLARLGLPFDVAAPAVNETPLAGEAPRALALRLALAKARAVAAAHPQA
VVIGSDQVADLDGEPLGKPGNHERATAQLRRMRGQTVVFHTALAVVCQATSFEQVDLAPVRVRFRDLSDA
EIERYLHAEQPYDCAGSAKSEGLGIALLDAIDSDDPTALIGLPLIRTCRMLRAAGLALP
>gi|319763863|ref|YP_004127800.1| uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase [Alicycliphilus denitrificans BC]
MSGPPSPGTLYLVPAPLDFGCDGETALAEVLPEGTLRRAARLTHWICENAKSCRAYLKRIDALHALAAPL
QQQHIAELPREVHKKGDHGGKDHASIDATALLAPLLAGHDMGLVSEAGMPAVADPGSSVVRAAHGMGARV
VPLVGPVSLLLALAASGLNGQNFAFVGYLPQDAAERAQRMRQLEVLALKTGQTQLFIETPYRNAALWQAL
LQALQPGTRLAVAAGLTLPQAEVQCRSVQQWRALGAPPPGKHVPVVFALGA
>gi|319763864|ref|YP_004127801.1| peptidase s49 [Alicycliphilus denitrificans BC]
MTEPTRTEPTGFDGNQPQPPDLWARNATESEARKAASAAPGWERELLEKLVLGTLAEQRAARRWRNFWRF
GWLVLIVLVGWAVVSRDIASPAKSAPHTAVVDVKGEIAAGAEASAEFVVAAMRSAFEDSGSQAVVLLINS
PGGSPVQAGMINDEIVRLKAKYNKPVYAVVEETCASAAYYIAAAADDIFVDKASIVGSIGVLMDGFGFTG
TMEKLGVERRLLTAGENKGFLDPFSPQSPTQRGYAQQMLDQIHQQFIAAVKKGRGERLKATPETFSGLFW
TGQQAVEMGLADQFGSLDYVAREIVKAEDVIDYTRRDNVAERLARKFGATFGETVLRGMRAAPVLR
>gi|319763865|ref|YP_004127802.1| rieske (2fe-2S) iron-sulfur domain protein [Alicycliphilus denitrificans BC]
MPDAQRIPLCASDALVDGGLAAAFDVCYRGQNLRAFAIRYQGRVHAYLNRCTHVAMEMDYQEGHFFDDSG
CRLICATHGAVFAPDTGVCLGGPARGPLAKVALSEEGGMVYWHTAPDLHPVAF
>gi|319763866|ref|YP_004127803.1| had-superfamily hydrolase, subfamily ia, variant 3 [Alicycliphilus denitrificans BC]
MPESPRPRRFDLIAFDWDGTLFDSTAIIVRSIQDAVRDLGGAVPSDEAAAWVIGMALPQALAHAAPDVPR
EKYAELGNRYRYHYLKRQDDVALFGGVLPMLQALRARGHLLAVATGKSRRGLDQVLQMVQLRGMFDGSRT
ADETAGKPHPLMLQELMAEFGVEPGRLLMIGDTTHDLEMARAAGCASVGVGYGAHDHAGFAEFGPLCVVP
SVAELHRWLLENA
>gi|319763867|ref|YP_004127804.1| pseudouridine synthase, rlua family [Alicycliphilus denitrificans BC]
MKHIIGGKPAQGRAPVEAPAARIVEVDAESAGQRLDNFLIRHLKGVPKTHVYRIIRSGEVRLNKGRTSAD
ARVAAGDRVRLPPVRVSDKVQDKAERPAPAREFPILLEDEHLIALDKPAGVAVHGGSGVSFGVIEQLRQA
RQEARFLELVHRLDRETSGILLVAKRRSALKHLQDQFRERETGKTYLALVPGAWPANKKVIDLPLHKYLQ
EDGERRVRVTTPQDSDGMRSITLVKVHSHLPARPLQGLPAMSLLEVTIKTGRTHQIRVHLASQGHPIAGD
DKYGDFDLNRRLQKQGLRRMFLHAWRLQFDHPASGERMELRAELPPELAAFLSTGHIDA
>gi|319763868|ref|YP_004127805.1| ribonuclease, rne/rng family [Alicycliphilus denitrificans BC]
MKRMLINATQPEERRLAIVDGQKLLDYEIEIEGREQRKGNIYKAVVTRVEPSLEACFVDYGEDRHGFLPF
KEISKQYFSEGVSPSQARINDVIREGQELIVQVEKEERGNKGAALTTFISLAGRYVVLMPNNPRGGGVSR
RIEGEDRAELKEAMDQLEYPKGMSIIARTAGIGRSAPELQWDLNYLLKLWNAIDGAAKAGKGAFLIYQES
SLVIRAIRDYFNSDIGDILIDTDDIYEQAQQFMQHVMPEHAARVKRYRDDAPLFSRFQIEHQIESAYART
VNLPSGGAIVIDHTEALVSVDVNSARAIKGGDIEETATRTNLEAADEVARQMRLRDLGGLIVIDFIDMEE
SKNRREVENRLRDALRQDRARVQFGAISKFGLMEMSRQRLKPSLSEGAHIRCPLCDGTGHVRDTEGFSLQ
MLRMIQEESMKDNTAAVHCQVPVEVASFLLNEKRTEIAKIELKQRVNVVLIPNKTLETPHYKLERLKHDD
PRLENLDASYKLADVVEEQTRVTRRSQEPTNKQTPVIKGVLPDAPAPVAEPRPEGAQRGAARGQGQQQQA
AAAPAPAQPRPAPAPAPEQGFFAWLKSLFGFGPAPSPAPVATPAPQPAEPAARGEARRGGERGNRRGGER
SGSRDANREGAGAEGRGRRGERQAEGRDTREPRNGRDGERRSERTESEGRREGRGGRDRGERGTQQPAQA
AADLAVNAEATATQERGERAPRNGERGERGERRERGERGERSRERGPRTIDADAPAATATATATATAAAD
FADTAPLTSLPDLDLTANETASATPEAANGGEERRERRSRDRYGRDRRERGERGARAAEAASAAPLMEFD
LPAAQAEAPADAEPAPEPARRSYFAAPAAQPAAAPAAEPIAAPVAAEPAAAAPVAPPAPEQAVTVAGIAP
ASAEPEAVAVSAPSAQAEEPAPTGGMPRVQAFTLPVDSLIQVAQASGLEWVNSDAGKIAAAQAAIAAEPK
PVRVPRERPPAPVLDEGPLVLVETRRDLRDMQLPFEKEGTAA
>gi|319763869|ref|YP_004127806.1| hypothetical protein Alide_3197 [Alicycliphilus denitrificans BC]
MLFVLSPAKSLDYDTPLPEGLPHTRPAFVPEAGRLIEVLRTQSPQQIASLMSISDPLAALNVARYATWRP
RFSAANSRQAVMAFNGDVYEGLQARTLSAEDLAWAQQHLAILSGLYGVLRPLDLMQPYRLEMGTRLATDA
GANLYQFWGTRIAGHLNQRLAPEPSPVVVNLASQEYFKSVNRKALKARVVECVFEDYKNGAYRIISFHAK
RARGLMARYAIQRRATTPRQLEGFDLEGYAFHPGASAPDRLVFRRTP
>gi|319763870|ref|YP_004127807.1| procollagen-proline dioxygenase [Alicycliphilus denitrificans BC]
MTDRQTITPALRQWIIDQAGTGIAAPALIDAMGQVGWAEDVAVRAVEEVLRAHLGEAARAQGLPPAVPVP
EPPLADSPLFIDAGDRRVEVLMAMANPRVVLFGNLLSPEECQAVIEAARTRMARSLTVQAASGGEEVNKD
RTSDGMFFQRGENEAVARLEERIARLVRWPVENGEGLQVLHYRPGAEYKPHYDYFDPAEPGTPRLLRRGG
QRVATLVIYLNDPVRGGGTTFPDVPLEIGPRQGNAVFFSYGRAHPSSRTLHGGAPVIEGEKWIATKWLRE
REFK
>gi|319763871|ref|YP_004127808.1| 7-cyano-7-deazaguanine reductase [Alicycliphilus denitrificans BC]
MTTPEQSQLGRASAYADQYDASLLFPLPRAPKRAEIGIAGDPPFFGADLWTAYELSWLNSRGKPQVAIAH
ITVPCETPNIVESKSLKLYLNSFNSTRFASLDEVRARIRQDLSEAAWRGASITGTVGVRLVTPDLFAQER
VHEQDGLLLDRLDIECTRYQPAPELLKANHDEAPVTETLVSHLLKSNCLVTGQPDWGSVQIAYSGAQIDQ
EGLLQYIVSFRGHNEFHEQCVERIFMDVWQRCRPIKLAVYARYTRRGGLDINPLRTSHPQPMPANVRTAR
Q
>gi|319763872|ref|YP_004127809.1| pas sensor protein [Alicycliphilus denitrificans BC]
MRINDPVTDNEYDFPAEELLMSTTDKRGLMTHCNAAFARVSGYDIDELLGQPHNLVRHPDMPPEAYKDLW
ATIGHGRPWSGLVKNRRKNGDCYWVRANVTPIMVDGKPQGYMSVREKPTREEVRAAEALYARIRSEREAG
RPTFVLHGGQIRPLGWRNQLGKLQRAGFTLRLAALLVPLLAVALAPALLGWGGMQAAVVQAVLLLAMAGG
ILWCFHRRITTAIGDAQRLARDLACCNLHTPSVQVAGRHPLGLLLESLHQIQINLRAVVGDARSEIAQFG
SISSEIATGAQNLSARSEAQASNLEETAAAMEELASTVRQSSESARQVLERSAHSAQLAQRGGQAMTEVG
DVVQAMEQSSRQMGQIIATIESIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAQRSAQAAGEIR
GLIGQSNASITRCVQQMHGAGQTIVQVVESVGHVSQLMEQMEATTREQATGIGQVNDAVVDLDRMTQQNV
ALVEQSAASARAMSGNAGILGRTLDVFQMR
>gi|319763873|ref|YP_004127810.1| DNA-directed DNA polymerase [Alicycliphilus denitrificans BC]
MIAQPRRIAHLDMDAFYASVELLRYPQLTGLPVVIGGGRRQHDDALAAAYAGRLAEIPPAAFPRLKDYVG
RGVITTATYAARQFGVGSAMGLMKAARLCPEAILLPVDFAEYRRYSRRFKEVILSIAPVMEDRGVDEVYI
DFTQVPGGQREGGRVLARLIQKSIHDATGLTCSIGVAPNKLIAKMASEFDKPNGISIVQPGDLQARIWPL
ACRKINGIGPKTNDRLQAHGIHTIGDLAARPRDWLVAHFGKASGAWLHDAAWGRDERPVVTESEPVSMSR
ETTFERDLHAVSDKALLGEIFTTLCQQVAQDLAAKGYKGRTIGIKLRYADFQTATRDQTIDQPTRDAATI
RRAAGQCLKRVPLTKRLRLLGVRVGKLQPDDGGAQAGEGETEEPLLL
>gi|319763874|ref|YP_004127811.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MELRQLRYFVAVAEELHFGKAAQRLAISQPPLSFNIARLEESLGYALLRRSTRAVELTAAGKVFYREACR
ILSLADQAQALGGRAARGEAGSLRIGFVGAALLTPMASVLRRFDLERPGLLMTVHELNSFEQIDALQREQ
IDFGILHPRSIPEGLHAQVLYREPFVCALPASHPLAGRKEIRLRALKDESFVLFPRHFSPEYHDRIIAMC
VAAGFTPQVRYEVRANATVASLVAAGFGVAIVPRSVGRVAIDGLQFRPLAGTRVDSELIGAWRGEDHESL
IRPLLAEMALQLKEGAS
>gi|319763875|ref|YP_004127812.1| hypothetical protein Alide_3203 [Alicycliphilus denitrificans BC]
MDIKQMLLGAALTAPLATAAWAQDYPRQPIRLVVPYAAGGMTDVVARIVGQRLGDSLGQPVVVENKPGAS
TITGADFVAGSRPDGYTLLAATNATLSANPWLYKNLRYDAVKSFNPIALVAMAPSVIVLNPKVPASTLAE
LVQLAKGKPGSLSYASYGNGSSAHLAGELLRTRAGIDVLHVPYKGSAPAKAATIAGEVSMTFEPAFTGAP
LIKGGQLKAVAVMGSKRSDALPDVPTVAEVGYPGMEMQAWVGFVAPAGVPQPVLARLAEEIKKIMAAPEV
QKQLVSSGAEPVGYYLGDFAAYLKDESAKYKAVIEEARIKAE
>gi|319763876|ref|YP_004127813.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MSDKPLQKYRVLDMTRVLAGPWCTQNLADLGAEVIKVERPRLGDETRGWGPPWMPAAADSERRDSAYFGS
ANRGKKSVTIDFTTAQGQALVKDLVRQCDVLVENYKAGTLARYGLGYDDLKAIHPGLVYCSVTGFGHTGP
YSHKPGYDFVFQAMSGLMSITGERDDLPGGGPQKVGIAVADITTGMYATVAVLAALLWREGSGQGQHLDM
ALLDCAMAFNSNQAVNYMASGKLPRRYGNAHSNAVPYQVFDTRDGQIVVAVGNDALFAAYCQAIGRPDLG
ADARFAKVSGRLQNRDALLPELCRAMAGQASAEWLARLDAAGVPCAPINDFEQALADPQVRARGIETPIT
LHDGATFRAIASPLRFSATPLDYPAGPPTLGQHTDAVLRERLGLTPQQQAALRASGVI
>gi|319763877|ref|YP_004127814.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MTFLPRYSAFAKPRPATSRQSSDKLASDCAGLDFFEIDPGLQQLLPLYVPQAELQYFLPHLKRLGQLAGG
RLNELATVADKHGPVLHARSRWGEDEDWVEYHPAYQEMEHIAFEQFQFHAMTHRPGAMGYPGTLSPVTKY
AFQYLFVQSEFGQMCPISVTDTSIHLIRKFGSEELKARLLQRMLAEKLEDLWKGTQFMTEKAGGSDVGQV
ETTARLIDGQWHLFGEKWFSSHVDADVALILARPENAPAGTRGLALFAMPRQREDGSRNSYRIVRLKDKL
GTRSMASGELRIEGAFAYLVGDPTRGLKQMMEQVNLSRLSHAVRAAAMMRRCLNEALQAASNRHAFGQRV
MDYPLMQRQLLKIMVPTEAALSVTLATADMMAKGYAGDKQAAAALRLLTPLLKLRTCRDNITVATGAMEV
RGGNGYIEDFVNARLVRDAHIGVLWEGTSNINALDAIGRAVRKDRAHLALQAVLREKLHGVQHSAPDMAR
QLGHALDQAIALAETVATRPEFENETRRAASAVYYAAAAVLLAWEATQPGVDGRRLLLADAVLRTHLLAA
DPMAAPSTLTHPREAALLGNARLSLQEAREFLAPAQRTATAPAAAAQPELVG
>gi|319763878|ref|YP_004127815.1| hypothetical protein Alide_3206 [Alicycliphilus denitrificans BC]
MSLPPDTLAWLWVPVVLFAAFAQTLRNTAQRTLTQELGTLPATLVRFLYGLPFAAAWLALLYWWPAQAPA
WPRFTAAYLGWIALGAFFQIAGTAFLLLAMAGRNFAVAVTLTKTEVLQVALFASIFLHELPTPLALLAMA
VATLGVLLLSLPPRGQLWSPSAWLSRPALYGLACGGSFAIASVGFRGGALALGAETPWLSGAWGVLIAQA
LQTLGLGAWVAFTSEKGLAPLWPAWRLSLLAGSMGAAASLAWFTAYAMQGAGPVRTLGMVEVVFSYLVSR
RLLSESFTRPEKAGMALMLAGLVLICLQGV
>gi|319763879|ref|YP_004127816.1| l-lactate dehydrogenase (cytochrome) [Alicycliphilus denitrificans BC]
MADLSKITCIEDLRVVAECRVPRMFYDYCDSGSWTEGTYRANEADFHGIKLRQRVAVNMEGRSTATTMVG
QQVKMPVCIAPVGLTGMQHADGEIHAARAAEKFGIPFTLSTMSICSIEDIAENTSAPFWFQLYMMRDREA
MARMIGRARDAKCSALVLTLDLQVIGQRHKDIKNGLTAPPRPTLANIVNLMTKPRWCLGMAGTKRRTFRN
LVGHVKGVSDMNSLAAWTNEQFDPRLSWEDVRWVKQQWGGKLILKGIMEVEDAVLAVQNGADAIVVSNHG
GRQLDGAPSSIRALPAIVDAVGDRIEVWMDGGIRSGQDVLKAWALGARGTMIGRAMVYGLGAFGEAGVTK
ALQIIHKELDVSMAFCGHTNLQNVDRSILVPGTYPTAPQA
>gi|319763880|ref|YP_004127817.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
MMTMPIPSRFFLRLLWLCFAALALGACQSPPPAAADAQAARRAQVLREQGFVQTGDGWELQMSGKLLFDF
NSDAMTGERREMLVRMGHALVGVGVRALRVEGHADDQGSPDYNERLSLRRAQAVAQVLAEAGIPRERIDI
RGYGASRPLVIGTSEAARQENRRVALIVPVQ
>gi|319763881|ref|YP_004127818.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MGRSSSLRGVVRRAHLGMALMAMALAGSLLLLAGLVALRVHLENNLQLMARSVAYTVEAAVVFKDAEEAG
QALARMLAREGVARAVVRDAEGAVFAQWQGAAPGLRARTGQALARLALLAPAVAHIRYEGAPMGTVELRG
DGQALLNFVLTGLAALLACTAVSGAVGLLLARRMLRDMVTPLQALAQVARAVRRERATGLRVPPARLAEL
RELGDDFNALLGELEDREALLQQKNAELQQRALHDSLTGLPNRASFEQHLQAAIARARGAGQAMALLFID
CDRFKQVNDTHGHAAGDALLIEVARRLQAQVRAGDVAARLGGDEFAVVMAPPATQADAQALAGRVAAAMR
EPLVLESGGVLRPQMSAGVAVFPQQGGDMESLLHSADAAMYEVKARRGRRTTDVYERAQR
>gi|319763882|ref|YP_004127819.1| hypothetical protein Alide_3210 [Alicycliphilus denitrificans BC]
MRALAALCALWLAAGAARAQEIVTDEKSQAVAKTVLGILGYTRWPSAPQTVRLCVVGPTEYADELLKGGL
LPGDRRVQVRRMRLDDSELLSQCDGVYAGMLDDAAWRQLRARLESQPLLSISERQELCLIGCMFCLDVRE
GGVAFETNLDSVARSGVRVNPRVLQLARRKGGA
>gi|319763883|ref|YP_004127820.1| penicillin-binding protein 1c [Alicycliphilus denitrificans BC]
MRRALIAAWLALAALPALALPTFDEVRADFRPSETLVLSREGEVIQRLRTDATVRRGQWLPLADVSPALR
TALVLSEDKRFYEHSGVDWAAVSAAAWANLWNQRTRGASTITMQLAGLLDGDWRQGPGGRTVTQKLGQAV
AAQVLDRRWRKDQILEAYLNLVPFRGEIVGIDALARTLFGKAAHGLDEREAAVAAVLVRAPNAAPARVAR
RACGVLREMRRQAHCDALDLFTAAALQRRAFDASEGIAPHFARQLLRRVPPGERVRSTVSAPLQRVAVET
LTRHLRELRGRNVEDGALVVLDNATGEVLAWVGSSGPLSQAAEVDGVLAARQPGSTLKPFLYAQAIGQRR
LTAASLLHDSPAQIPTAGGLYIPQNYDRQFKGWVSVRQALAASLNVPAVRTLVMVTPDAFFAQLRALGLP
LAESGGYYGYSLALGSSEVPLLHLTNAYRALANGGRASPVAFAATPRPAFTQALDAGAAFIVGDILSDAN
ARAPTFGTDSVLATRFWTAVKTGTSKDMRDNWAVGWSRRYTVGVWVGNAGGAAMHDVSGTSGAAPIWADV
MGWLHRGTPSRAPRPPEGVARQAVRYGPAPDGGRLESARDEWFLRGTQQALFAIDKIAESDYQESAEGQK
DLKPTARILAPAPGTIVALDPDIPPAHQRLRFEADSAAVLWRIDGKPAGQGAQWAWLPWPGRHSVELLDA
RGRVLDQIPIEVRGAGVRARE
>gi|319763884|ref|YP_004127821.1| hypothetical protein Alide_3212 [Alicycliphilus denitrificans BC]
MLMGLAANRLHHQSEDAALFAFLRACEAGIRELRLGLHAVGRTHDAIAAAGMLRGYAPLVRYPYGREGGL
MKLVAEVVGMPEPGRTLDGAIYLIDPVDPSSIFPEALALKRQCVIHGKPFLSTVASARDWVEMERIHSGL
PPDRHADRFHDYEAQTLALIAHDAMKGAMLDFAARNFDLLSRFGCRVGTGTTGQRLNEMAWSRGWPAGEP
WVQRFNSGPLGGDAQIADLVLERRCRRAIFFEDPHVARQHEADIQLLERAVTTATHDAVCTTSPVVAQRW
CDAARLRGSRAGR
>gi|319763885|ref|YP_004127822.1| dehydratase/racemase [Alicycliphilus denitrificans BC]
MTYPFLDNLRVIESSAFIAAPLAGLTLSQYGAEVIRVDMIGGGIDYGRMPRMPQADGRGRSLYWTALNKG
KRSIAIDLRRPQGRELVQALATAPGPRGGVLLTNIGTPWLAHEVLAAKRADVITCTIEGNSDGSTALDYT
VNCATGYPAVTGGGSVQHPVNHVLPAWDMACAYQAAFAIVAAVSRRATCGEGAQLRIALSDVAFTALSHL
GVMGEAELLHQDRPSIGNDLYGAFGRDFGTSDGGRIMVAAISINQWDALVQACGIADAIAALEQRLGLEF
RDEAQRFEARAEIAALVEPWFTARTRAQAEAELTRHKVCWGRYNTVTELLAADARASVANPVFERIDTPG
IGTHLAAGAVVRAAGLPRQPTSPAPLLGTDTDQVLHEVLGLDSGVIGRLHDAGIVAGPERDPSRV
>gi|319763886|ref|YP_004127823.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MMLAIVSPLLARTRALFGGAVTALARECAEGGKLDARKLDAQQFASYEIAWAAADLLAAETLAGARLNAL
DAKLAGVFVAEALGAVLRRLEPLLLDLRLDLQLGELHALAASGELAQFRREAASAAVQAQAGAAVAAGDG
ELGDVPLDAGIVMARDGFRRFAAEAVAPLAERIHREDQIVPESLLQPLREMGVFGLSIPEAYGGTAPGSH
DDTQMMVAVTEALSEGSLGAAGSLITRPEILARALLAGGTEAQKRRWLPALAVGEPLCAIAMTEPDFGSD
VAGLQLKATRAEGGWLLNGAKTWCTFAGKAGVLMVVARTDPDKAAGHRGLSLLLVEKPAFEGHEFAVAQE
GGGTLHGRAIPTIGYRGMHSFDLVFENFLVPDENLVGGDAGLGKGFYFTMTGMMGGRMQTAGRALGVMRA
AVRAAIRYAGDRQVFGAPLASYQLTQVKIAAMAARFVACRWLAYDVARLLDAGGGRMEASLVKLLACRSA
ELVTREALQIHGGMGYAEETAVSRYFVDARVLSIFEGAEETLALKVIARSLLEQALEKR
>gi|319763887|ref|YP_004127824.1| CoA-binding domain protein [Alicycliphilus denitrificans BC]
MAAGRASGAELARVLLRPRSVALVGVSDDAAKPAARPLRYLRQAGFAGAVYPINPRRGTVQGERAWPSLA
VLPEVPEHVFVMTATEHVLDTLRECERLGVKVATVLAGGFSEAGPEGVAREEAVRAFARTSSLRLVGPAS
LGVAHPGSGLLLTANAAFAERELPPGKVFVASHSGSMLGALLSRGKARGVGFAGMVSVGVEADLSLGEIC
SATLDDPEIDSYLLFLESLRRGADLQRFAREAARRGKPVIAYKLGRSQAAAEMATTHTGALAGEDDVADA
FLRGLGVARVGVLEALLEAPALARRIPLGATGAARPPRVGIVTTTGGGAAMVVDQLGIRGIVVEPPSPAT
LARLAAANLPATPGRVLDVTLAGAKYEIMRQLLAILLDAPEFDLVVTVVGSSARFQPELAVKPVIDTACT
ATRPLAAMLVPDAPQALAELTAHGVPCFRSPEACADAIAAVLQRRSPAVPAAATQPARDEAAFISEADAY
DLLEKLDVPHAPVVKMPLAEPPRALPFAFPVVAKVCDERIPHKTEVGGVVLDIRDEDGLHAAFETLRRNL
AERAPGIECRDVLVQTMRSGLMEALVGYRVDPDAGPLVMLAAGGVWTEVARDRALRLAPVTVEAAREMIA
EVKAFRTLAGLRGRPRGDLDALARAVSALSQLALQPQLGVVEAEVNPLMVMKEGAGVLAVDALVLRRRP
>gi|319763888|ref|YP_004127825.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDFELSEEQQAFADSVARFAREKLAAGALRRAHSHEWDYEAGQLIAEQGLLGIAFAQADGGQGGTLMHAV
LAIEQVALACPRSADIVQVGNFGPIRTFVEYATPEQKARFLPGLLSGQKLICLGMSEPEAGSAVTELKTT
ARQEGDEYVINGSKVFSSHGLEADLFLIYVRFGPGVGGIGSVLLERGMPGFSIGQPTRFMNGEQWGQLYF
DNVRVPARNLLLGAGGFKKQISGFNVERLGNASRALACGRYCFNLAREHALQRKQFGRTLAEFQGVQWKF
AEMAMKLEQAQLLLYKAAMEGEHGLPSAQSTAMAKLACNLAGWEVSNEAMQVMGGLGFTQDLLVEYCVRR
TRGWMIAGGSIEILKNRIAEGVFGRTFSQRPGMAA
>gi|319763889|ref|YP_004127826.1| asparaginase [Alicycliphilus denitrificans BC]
MPPIEPHRCALITTGGTIVSRIDPATGLAMPVLSGDELLSTLRGHGDPGEVEVHDFCRVASPHIGPREWV
GLSALAQSLAAREDVAGIVVTHGTSTLEDTAWFLDLVLRTEKPVVVTGAQRNASAPDFDGPRNLLTALKI
CRAPAARGLGVLVALNEHVNAAREATKTHTVDVETFQSGEWGYLGSVVNDRVTFHRAPARRLHIPLTASA
LPPVEIVSMYPGASGALITAAADAGARGIVVQAVASGHVNEAMAGAIGAVLARGVAVAVATRIPRGGTRA
GYGFPGSSQRLAEAGAVLAGDLSPWKARIVLMLALQRGPVPAPELARLFDQ
>gi|319763890|ref|YP_004127827.1| hypothetical protein Alide_3218 [Alicycliphilus denitrificans BC]
MKHPTRRTFNTALAGALAGAAGLPAFAADDAANYPSRPITIVVGFAPGGPTDIVARVVATKLSQAWGQPV
VVDNKPGAGSNIGTEQVVRAAPDGYTLLVETIANATNMSVYKNLKYDTKRDLVPIVQFMAAPSVLVVNPK
LPAKNLKELIALAKAEPGKLNYASTGVGGSPHLAGEMLKMRAGIDIVHIPYKGAGPALNDLLAGNVSMGF
MTALGLVPYLESGRLRAIAIASPKRSPEMPDVPTMEDAGLPRFWVLSWNGLAAPAKTPKAIVEKLNREVN
RILALPDVKKQLQSLGGDPVGGTPEEFASFVNSEIQTWSAVVQSAGFALE
>gi|319763891|ref|YP_004127828.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MKFSFFDTLEAVLRSGSLAGAARLMNVTPSAVSMQMKQLEAHFGRPLFDRAGLTVRPTPLAREIVEVMRE
PMQRVEALRRRHGAQVDGLMRLGVIETMQSALLPGVVAWLRAHHPALQVRPVRGRSVELLESVKAGRVDA
AILVQPATGASRGLVWYPLLRKELVLLAPPDTSESRIPALFRTHDWIRFDPETNAGRLTARWMRKHVPGA
RPAMDLQSVQAVVAMVSAGLGVSIVQQPDAHMTQPLPVRILRLGRDAPSVQVALMARQADAGSRKLEVLR
DAVASVPDPTAAR
>gi|319763892|ref|YP_004127829.1| metallophosphoesterase [Alicycliphilus denitrificans BC]
MSLIQRLPAGPLDIVGDIHGEIAALEQLLAHLGYGGAGRHPEGRRLVFVGDFCDRGPDSPAVLRLLMPML
ASGQALAVLGNHEINLLRGDAKDGSGWYFDSRRASDEAKYAPFARMPMGEAPAILEQLGRLPIALEREDL
RVVHAAWCEPQIAAARGLPAGTVRSAYDHYEDVAARQAQASDVVRRMQDERQLWPHSLEDHGHPPPFLPA
HSERELGKSMVNPLKVLTAGVERECRTPFYAGGKWRFVQRVAWWSEYADAQAVVVGHYWRRLLEGDAAAH
GPQAENLFGHTSPLSWHGLRGNVFCVDYSVGARWVARRNGEEPGRRFKLAALRWPERTLVFDDGVQAPTQ
GFGTPADAQA
>gi|319763893|ref|YP_004127830.1| alpha-2-macroglobulin domain protein [Alicycliphilus denitrificans BC]
MRRAAAALLLLAAGAAQALVVTSLSPQGEVARVRQVVAKFDAPAVRLGDPQAPAPLTVACSDADAAKGQA
RWTGEREWVYDFAQDLPPGVRCTVSVKTGFKSASGAQLAGAVSYQFNTGGPFVQSVRPGTWQEIDEEQFF
VLQLNGPATQASLLEHTWCVADGVGERVPVRLVEGAQRAALLQSLHLDKAAAKEPLRYATLTCGRRLSAG
SQMQLVYGRGVATPSGVANAQERRFAYKVRQPFSAEFGCERENARSDCLPVRPMHLAFNAPVARKLAQGI
RLKGGGQTLAPEIDGSQEGDALVNGVRFAAPLAAQTQFTLELPSGFKDASGRPLANAQSFPLKVATGAMP
PLAKFAAAPFGVVERFAEGPDGPALLPVTLRRVEAGLDVQGLQPGAAVQGGKVSTLRPDSDADIIAWLRK
VQRYDEATVDRAQARRDARGPLPAAFDERDGDRVQTRMLSLLQGQAGVKKLDLPRPAKDDPRPFEVVGIP
LPPGFSVVEIASPLLGQSLLDERHGASRTMYVRTSVLVTNLGVHFKLGRENAVAWVTTLDKGRPVAGAQV
RVSACDGRLLSTVTTGGDGVARFEGLDSDPPACGGGDEWRNAYFVSARAQDELAFTWSDWQRGIEPWRFN
VPVSSEPRPDEVAHTIFDRTLLRAGETLSMKHLLRTQTGRGLGLPDARPAELAITHVGSGQQFTQPLKWS
KTATGGLSAESEFAVPPAARLGMYQVELRGGEGGDGARSFLSGSFRVEEFRLPVLEGRIAPVDGKPLVRA
RSVPTDVQVGYVSGGGAARLPVRVSAMVRAKSLQFSDFDAFSFQPPRKRDARGSSDDEEESASQDTRVIA
DKLPLTLDKDGAGRIAIDDVPQAPRAQELVLEASYSDPNGEVQTLRGTHTLWPAAVVAGIKAEGWVSSGS
RVRLQALALSLDGKPQEGVPLAVQAIARTTTTSRKRMVGGFYSYDNKTETKDLGTVCTGKSDGRGLLLCD
ARLDEPGEVELVVSARDKNGNEAQAASSVWVTRRGELWFGGEDHDRIDLLPEKKSYQPGETARLQVRMPF
RQATALVSVEREGVISTRVVQLSGQDPTVQIKIEDGWAPNVYVSVLALRGRLREVPWYSFFTWGFKAPRE
WWNAFWYEGREYVAPTAMVDLSRPAYRLGLAELRVGEQAHRIAVQVKADKDSYPVRGKAQVTIQATLPDG
KPAAGAEVALAAVDQALLELMPNTSWNLLDAMLQRRAWGVATSTAQMEIVGRRHYGRKAVPAGGGGGRAP
TRELLDTLLLWQPAVRLDAQGQARVTVPLNDALTTFRIVAVADAGTGLFGTGSASIRATQDLQIISGLPP
LVREGDQFRAQVTLRNTTARTMTVEVAPRATLLALDRQTVDIPAGQARELAWNVTAPAQSGQTRAQALLW
EIEARDTLGGARDALKARQRLIPAVPLGVQQATLVQVDGSYRVDVAPPAGALPGRGGLKLALQPGLADGL
PGVRDWWARYPYACLEQQASKAIGMGDARQWQSIVARLPTYLDADGLAYYFPPQAGSADRGSDTLTAYLL
AAAHEAARLSPEFALPPEAREPLERGLIAFVEGRIERSFWSPRKDLDLRKLAAIEALSRYGKAQARWLTS
LNIAPNQWPTHAVIDWLNILRRMPDLPQRAQRLQEATQILRARLSYQGSRLAFSTEQDDAWWWLMQGGDV
NAARLMLAVMDDPAWQGDMGRLASGFIARQQGGAWRTTTANLWGALALAQFGARYEATPVAGTTRAAMGG
RQASVDWSKVVRAGTGDEGGAMHQTTWFGAPAAPGGWKNDTMFLPWGAEGGGGQLTVTHQGPGKPWLTLQ
SVAAVALQAPMNAGYGIRRSVTPIEQADKSLPPGTYSRGDVLRVTLEVTGAADMAWVAITDPVPAGATIL
GGGLGRDSEIATQGEKREGWGWPAFEERGFESFRGYYEYLPKGTVKMQYTLRLNNAGEFQLPPSRVEALY
APEMFGEAPNARVKVVQP
>gi|319763894|ref|YP_004127831.1| hypothetical protein Alide_3222 [Alicycliphilus denitrificans BC]
MTLSRRHLLASALAAGALPLLPARADAPKTLRVLVGFPPGGGSDAIARLLADKLKDTLGVPVVVENRPGA
GGQIAAQALKGAPADGSTLFLTHDHTISILPQVVKNPGFDPARDFVAAGGFATFVNCLAVSPGTPAASFA
EYVDWVRRQQGGKSAVGIPAPASTPEFLVRLLGQRYQLDLVAAPYRGSAPMIGDMLGNQIAAGIGSVQDF
IENHRAGKLRVLAVLGGRRQAALPQVPTFAELGLPGFEDTPYYGFYAPAGTPEAVLARFAEALSRVVAQS
QVREQLTAMGLTVGFMTPAQLAARERAYTAAWQRIIQDSGFKPQ
>gi|319763895|ref|YP_004127832.1| argininosuccinate lyase [Alicycliphilus denitrificans BC]
MPHTPASQPSNDQLATKAQAWSALFSEPMSDLVKRYTSSVFFDKRLWQADIAGSLAHADMLAAQGIISGD
DLAAIERGMAQITQEIEAGQFDWKLDLEDVHLNIEARLTQLVGDAGKRLHTGRSRNDQVATDVRLWLRGE
IDLIDGLLRELQLALVEVAEKNVEVILPGFTHLQVAQPVSFAHHLLAYVEMFARDAERMRDARRRVNVLP
LGSAALAGTTYPLDRERVARTLGMEGVCQNSLDGVSDRDFAIEFTAAASLCMVHVSRLSEELIIWMSQNF
GFIRIADRFTTGSSIMPQKKNPDVPELARGKTGRVVGHLMGLITLMKGQPLAYNKDNQEDKEPLFDTVDT
LKDTLRIFAEMIGGQANPATGAKEGGITVNAEAMRAAAQKGYATATDLADYLVKKGLPFRDAHETVAHAV
KAATTHGVDLSELPLAVLQGFHPAIGKDVFDALSLQGSLCARGTLGGTAPAQVRAQLARHRARLAA
>gi|319763896|ref|YP_004127833.1| histidine kinase internal region protein [Alicycliphilus denitrificans BC]
MQETQILSTHPAPLPGPAPRGRAVGRALVFDACQVGVVLRAVLFVEAVLGVGAMFGAAGPGEWLARLALL
TGGALPATLAWLVTACSLKKGLQRLREPLQYAAGVLLGMLAGLYACAMLALAGTTADSPPWLACAASGAL
LSALLVTALLLRARARTPAATTARLTELQSRIRPHFLFNTLNSAIALVREEPAKAEALLEDLSDLFRHAL
VEQGESATLEDEIALARRYLDIEQVRFGERLRVQWLIDPRASAARLPPLLLQPLVENAVKHGVEPTPGPA
KLRITAERRGSRVVLTITNTLPPGNTGAEPRARGHGIALANVRDRLRLLHDVDCDFHAGVRDGLYQVRIA
LPVK
>gi|319763897|ref|YP_004127834.1| lipoprotein, yaec family [Alicycliphilus denitrificans BC]
MLKQTLSALAIAALAFSAQAADVLKVAATAVPHAEILNFVKPRLKAEGVDLQVKEFSDYVQPNMAVEDKQ
LDANFFQHQPYLDSFNKDRKTSLVMVPGGKVHVEPFGAYSSKIKNVKDLKDGATVAIPNDPSNGGRALIL
LAKQGLIELKDPKSLTPTPLDVVKNPKKLKFKELEAPLLPRALADVDLALINTNYAIEAKLNPTKDALFI
EGADSPYTNIVAARADRANDPNIAKLMKALHQPEVKKFIQDKYKGAVVPAF
>gi|319763898|ref|YP_004127835.1| spovr family protein [Alicycliphilus denitrificans BC]
MNLSQYPVLQRRAGRQSWKQSVPGERHQRGVPRSPLPAGKRPAHPLPDPSDWTFELIERYHAAIAATAER
YGLDTYPNQLEVISAEQMMDAYASVGMPVGYRHWSYGKEFLATERRYRRGHMGLAYEIVINSNPCISYLM
EENTTAMQALVIAHAAYGHNSFFKGNYLFGMWTDAGSIIDYLVYARDFVSQCEERYGLDTVEQWIDSCHA
LANLGVDRYHRPSKKSLARERAEREQREAYAQQQVNVLWRTLPARPGKGDSAVQESERFPKEPEENILYF
IEKNAPLLEPWQRELVRIVRKIAQYFYPQRQTQVMNEGWATFWHYTLLNTLYDEGWLTDGVMIEWLSSHT
NVIYQPPAGHRAYSGINPYALGFAMYRDIRRICQDPTEEDRRWFPDMAGTPWLPALHHAMQNFKDESFVG
QFLSPKLMRDMRLFAIHDDASERELLVSAIHDEDGYRQLRQTLSQQYDLGVREPNIQVWNVNLRGDRCLT
LRHTQYQGRPLADDALEVLKHVARLWGFGVRLETVSGDGEMPVLLHSVPAPPA
>gi|319763899|ref|YP_004127836.1| hypothetical protein Alide_3227 [Alicycliphilus denitrificans BC]
MALHIIDRRLAGKNKSVGNRERFIRRYKQQIAEAVRRAVDKRDIRHIEQAENITIPRKDIREPVFRHGSG
GIRDTVHPGNRDHVRGDRIARPLGGGGGSGSQASDSGEGEDDFTFTLTKEEFMQLFFEDLALPRMLRTHL
GETPQYKTRRAGYSHDGTPHNLAVLRTMRGALGRRIALTKAPHRELQALQQELDGLLAQDDGTSEAVAEL
QQRIDALRERMARVAFLDPIDLRFRNRTKLPVPSSQAVMFCVMDVSGSMDQERKDLAKRFFILLYLFLTR
HYEKIDIVFIRHHTQAAEVDEDAFFHSTESGGTVVSSALVLLDQIMRARYPAGDWNIYVAQASDGDNFHD
DGGNCRSLLADRILPLVRYFAYVQVAQEEQNLWDEYSQLPPLFPYFAMRKVSGPGDIYPVFRDLFKKEGA
VA
>gi|319763900|ref|YP_004127837.1| prka aaa domain protein [Alicycliphilus denitrificans BC]
MDAISNYAARYVRLREEEMSIDEYLALCQRDPMAYGSAAERMLAAIGEPEMVDTRSDPHLSRLFANKVIR
RYPAFAEFYGMEDAIEQVVSFFRHAAQGLEERKQILYLLGPVGGGKSSIAERLKHLMQKVPFYALKGSPV
NESPLGLFDVAEDGPVLEEQFGIPRRYLQHVLSPWAVKRLDEYGGDIRKFRVVKRYPSILKQIAIAKTEP
GDENNQDISSLVGKVDIRKLENFAQDDTDAYSYSGGLCLANQGLLEFVEMFKAPIKVLHPLLTATQEGNY
KGTEGFGAIPFDGLVLAHSNESEWKAFRNNRNNEAFLDRIYIVKVPYCLRVSEEVRIYEKLIRESSLANA
VCAPGTLKMMAQFAVLTRLKEPENSSIFSKMQVYDGESLKDTDPRAKSYQEYRDYAGVDEGMSGISTRFA
FKILSKVFNYDSTEVAANPVHLMYVLEQQIEREQFPAELETKYTGYIKEYLSPRYAEFIGKEIQTAYLES
YSEYGQNIFDRYVTYADYWIQDSEYRDTDTGEVFDRNALNAELEKIEKPAGIANPKDFRNEIVNFVLRAR
ANNQGKNPSWTSYEKLRLVIEKKMFSNTEELLPVISFNAKASAEDARKHEDFVTRMVAKGYTSKQVRLLC
EWYLRVRKSS
>gi|319763901|ref|YP_004127838.1| transcriptional regulator, rrf2 family [Alicycliphilus denitrificans BC]
MRLTQWTDYALRVLMYCAASQEREQPVTISEVAEAHGISRSHLTKIVQQLAAQGLLDTTRGRGGGMRLMK
PAHEINLGAIVRMTETDFDMVECFNAELNQCRMSSHCRLQSVLSNATRAYLAVLDGLSVADLVAPQPAAS
QGARASTQAMRWVPGLPQVVRSV
>gi|319763902|ref|YP_004127839.1| iron-sulfur cluster repair di-iron protein [Alicycliphilus denitrificans BC]
MNAIAAAATSPIDPSQAIGQIAVQLPGATAVFRRLKLDFCCGGQVSLRQAAGDKGLDLQAVVDELSALQR
PNTLPDAGTPSELVDHIVARYHDVHRAQLPELIRMARRVEAVHRSNPNTPHGLADALEAMEQELVAHMHK
EEAVLFPMLRAGGNSFVSQPIAMMRHEHTDHGEALEQIARLTDDITPPREACNTWRALYAGLAQFSDDLV
NHIHLENNVLFPQFEAAAQGGCGSSGCGCS
>gi|319763903|ref|YP_004127840.1| globin-like protein [Alicycliphilus denitrificans BC]
MDTTAKRPLDADSITALVYGFYADVRADAQLGPLFDRAIGAHWDAHLARMVDFWSTVALGARSFKGDVFG
KHMAVQGVEPGHFAIWLRLWGQRTDALFEPEVARELQQAAQGIARNLFRGYFG
>gi|319763904|ref|YP_004127841.1| hypothetical protein Alide_3232 [Alicycliphilus denitrificans BC]
MEIAGCTAQRLRLLLEREMPFGKHRGTVIADLPANYLHWFAREGFPRGEIGQLLALMYEIDHNGLRELLA
PLRA
>gi|319763905|ref|YP_004127842.1| hypothetical protein Alide_3233 [Alicycliphilus denitrificans BC]
MYPWIFSLHLLAATVWTGGHLVLALTVLPRALRLRNPQVLLDFEQGYEKLGMPALAIQVASGLWMALQLV
PDWGRWFSPGTALERAVSVKLALLAGTALVAAHARLRVIPRLNARTLPLMAWHVAAVTLLSVGFVLTGIS
FRYGGL
>gi|319763906|ref|YP_004127843.1| aldo/keto reductase [Alicycliphilus denitrificans BC]
MQYRFLGKSQLQVSALCLGTMMFGDQTDEAEAASIVAHAREHGVNYMDTADVYTKGASEAMLGKLLKGQR
HDWVLATKLGNKMSERPNEGRYSRAWMLREVEASLARLQTDHVDILYLHRDYEDMDLEEPLYAIEALLRA
GKIRYWGVSNFRAWRIAELVHGARRIGMPGPTVCQPYYNLLNRMPEVEILPACRHYGLGVTPYSPVARGV
LTGKYLPGQAPEAGSRAGRGDRRMGQTEFRQESLAIAQTLMQHAQARGVTLAQFATAWVLAHRSVSSVIA
GPRTLAQWQDYLPALDYTVTPEDEALVDGLVAPGHPSTPGYTDPAYPLQARRA
>gi|319763907|ref|YP_004127844.1| slyx family protein [Alicycliphilus denitrificans BC]
MKDRLEALEVKAAYAEDMLDQLNLTIYRQQQQIDQLLREVAQLRQQVPEGGGAAVRSLRDELPPHY
>gi|319763908|ref|YP_004127845.1| aminotransferase class i and ii [Alicycliphilus denitrificans BC]
MQFADRLNNVETSAIRELFKLLGKPGIISFAGGFPDSAMFDVDGIREASQRALAEEPGGALQYGATEGYE
PLREQLSAFMAAKGAKDVAPGQLIVTTGSQQALDLLGKTMIGPGDKVIVEGPTFLATIQCFRLYGADLVS
APIDGQGVKTDELERLIAEHRPKLVYLIPTFGNPSGAMLSLERRRKVLELAVKYQTLIVEDDPYGDLYFG
EAPPPSLLALSPQVPGSRELLAHCGSLSKVLSPGLRVGWLVAPPELLAKATMCKQFSDAHTSTFAQATAA
QYLKAGRMPGTLAHVRAVYAERAQAMGDALRRELGAAVEFVQPQGGLFVWARLTGANGAVADGDVLAKRA
IDKGVAFVPGAPFFCANPDRATLRLSFATAGVDKIREGVARLGQAVA
>gi|319763909|ref|YP_004127846.1| transcription activator effector binding protein [Alicycliphilus denitrificans BC]
MHVEIRTLPALRLAYLRHTGPYGAPAIAQTWERLGAWCEAQGLMRPRPRFYGISHDDPGATPAAQCRYDA
CVPVDAAFAPQGDVGVQAFAGGRHACARFTGPASQMGAAWEWLYGQWLPASGLQADQRPGVEVYEEDFAV
DPATGAFSCWICMPVR
>gi|319763910|ref|YP_004127847.1| hypothetical protein Alide_3238 [Alicycliphilus denitrificans BC]
MTSLTRSRFLSCLVAGAAALAAPAAFAQQNYPDRPIKLIVPFAPGGATDILGRLLAAGLSDKLGQPVVVE
NRPGAGTVVAGGLVAKAPPDGYTLFLGASSTLTYNPAIRAQLPYDPLHSFTPLAMVADMGLVLVANNATP
GKTLQELVALSKAEPDKFSYGSFGTGSSVHFGGEMLKTATGLKAMHVPFNGSSPSLTALMGGQVQLAVDT
VVATTPLIKAGKIRAIATLGAQRLPLLPQVPTVAESGYPGFSADTWFPFLAPAGLPAPVRQKVEKALADV
MADPAVRARLVDVGLTPAWGPGSVVTERVERELPQMRAVAARSGIRVD
>gi|319763911|ref|YP_004127848.1| amidase [Alicycliphilus denitrificans BC]
MPQQPQFPAAAGIAEMSAVALSRAIHAREVSCVEVLDACYAQIDRLNPVVNALVAFADRDAMRQLARALD
ERLARGESLGPLHGFPQAPKDIMPAAGMVTTKGSPLFAGQVSQADCVVFERMRAGGCLFVARSNSPEFGL
GGHTYNPVYGTTRNAWDTTRSAGGSSGGAAVAVALSMLPVADGSDMMGSLRTPAAFNNVYGLRTSVGCVP
HGPGEEVFFQQFSVAGPMARDIPDLALLLSVQAGFDDRLPLTRRGEGPRDWGAALARDFRGARIGWLGDL
KGHLPTEPGVLDTCRAALRHFTDIGCTVDDALPAFDFESLWRAWLDLRSFSVAGANGALYENPEKRALLK
PEALWEIERGRALCAMRVYDAARVRSAWYEALRRLFATYDFLVLPAAQVFPFDAALDWPHAVGGREMDTY
HRWMQAVVPATMAGLPALAAPAGFGPQGLPAGLQIIGPAQADLAVLQIGHAYDQASGYARRRSPLLG
>gi|319763912|ref|YP_004127849.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MISHRLQDTALRYFLEVVRSGSVSEAAARLSVSPSAVSRQVAGLEDLLGLPLFERRPRGMVPSAAGELLA
AHARRGALEADRVVSDIQALRGLRRGLIRVCASGGFVVEFLPRAMALFRAEHPGMQFHLRAVAPAAVTQA
VLDGDADIGLTYSRAAERDIEVQHRQVSPVIAIMRPDHPLARHASVTLAQMHPYPIALPDGDNTARQLFD
IACSQRRLVFEPALVTGQFEALTHFVLHGGGLSLAGEVTVRERMRRGELHAAQIRERAVHGRAIELQTLA
GRTLPEGVHAFLNHLRALLPAPRAATIPPNPQNDTPP
>gi|319763913|ref|YP_004127850.1| endonuclease iii [Alicycliphilus denitrificans BC]
MKTEDIEPFFAALKAANPQPNTELEYTSVFELLTAVLLSAQATDVGVNKATRRLFLVANTPQAMLDLGLE
GLEGYIKTIGLYRSKARHLMQTCHILVERHGGQVPRTREALEALPGVGRKTANVVLNVAFGEATMAVDTH
IFRVGNRTGLAPGRNPLEVEKRLLERVPQQYMVDAHHWLILLGRYVCQARKPRCWECVVAPYCGYQPKTP
AP
>gi|319763914|ref|YP_004127851.1| appr-1-p processing domain protein [Alicycliphilus denitrificans BC]
MIKEVTGDILLSKADLLAHGISANDPFDSGLALALRERWPSLVKDYRHDTRSKAIGTGEVWAWAGVQEGG
GVRRIVNLVTQNTLGQGPAAKPGKASVENVRAALQNLAKVIRQEGIKSVALPRLATGVGGLEWDDVRPLI
TQYLGELGIPVIVYSTYRKDVQADEGL
>gi|319763915|ref|YP_004127852.1| nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase [Alicycliphilus denitrificans BC]
MQLIPDIPSIDDSALAARLQSRIDGKTKPLGALGRLEALALRLGLILGTEMPELRAPQMLVCAADHGLAA
RGVSAYPSDVTWQMVENFLAGGAAVSVLARQHGLVLTVADCGVAREVPARAAAPGAPRLVHCRVAAGTQD
ASGGPAMSAAQCAQALQNGRDIVRGLPGNVLLLGEMGIGNTSVASLLLARLAGVPLAECTGAGTGLDAAG
IARKQAVLEQALAANAGATGPLDALAALGGFEVATLAGAVLQAASERRVIVVDGFITSAAVLVAARLAPA
VLERCVFSHRSGERGHARMLEELRAEPLLDLGLRLGEGSGAALAWPLLESACRVLREMASFASAGVAGPS
AS
>gi|319763916|ref|YP_004127853.1| cobyric acid synthase cobq [Alicycliphilus denitrificans BC]
MKTKTLPGPARCVMVLGTTSGAGKSWLATALCRHYSNQGLKVAPFKAQNMSNNARVVAGPGGAWGEIGSA
QYFQALAARAEPDVRMNPLLLKPEADTKSQVVLLGQVSDALSQLPWRGRSARVWPQIAAALDALRAENDV
VVIEGAGSPAEINLHASDVVNMRVARHAHARCLLVTDIDRGGAFAHLYGTWALLPGDERALIAGFVLNKF
RGDASLLAPAPEMLREKTGVPVVATIPMQWNHGLPEEDGVFDMAATAGGSVHTRIAVVAYPRISNLDEFQ
PLKNVPGVRLSWARSPADVDGADWIVLPGSKATAADLAWLRAQGLDAAVAVHAARGARVLGICGGLQMLG
EALIDTVGVDGNGPGLGLLPLVTSFEAEKTVRPAHTRFGAVQGAWQALGGVPVQGYEIHHGQTAQHPAMA
AKGDVAREVIPGLAWQNGAGNVLGLYLHGLFEDGGVLRALFGAGAPTLEQVFDRMAEGVGRWFDPRVLEI
>gi|319763917|ref|YP_004127854.1| aminotransferase class i and ii [Alicycliphilus denitrificans BC]
MSDPALLHGGPDALGAAPYDFSTNANACGPCPAALDALRQADRSRYPDPAYTALHARLAAFHGVPAPRIV
LAASASEFIHRITAFAARGGLRHAVLPAHGYGDYARAAAAWGLARADAAGQPALHWACEPASPLGTADEA
LARWALQPARQGDVRVIDRAYAPLRLEGAAAAPPVDAWQLWSPNKALGLTGVRAAYAIAPGEAQAAAVQA
LAPSWPLGADGVALLQAWTGDAAQAWLAASLATLRAWKAAQVALCASLGWAVLPGSLANFFTARPPAGDL
PGALQALRAQGIKLRDCASFGLSGHVRLGVLTPPAQQALAAAWRQCVA
>gi|319763918|ref|YP_004127855.1| cobalamin biosynthesis protein cobd [Alicycliphilus denitrificans BC]
MPFPILDAAAAAVALLLALSIDRWWGEPPAALHPVVWMGRALGACGARVAPAQATGRDLWSFWLAAIAWC
ALAAIVLVVFGVLQWTAVAHLPAWGAALALGLLLKPLLAWRMLRREVLAVEAALGESLEVGRARLAWLVS
RDVRQLDEAQVRESAIESLAENLSDSVVAPLFWFVLLGLPGAALYRFANTADAMWGYPDMRGGRYWQWAG
KWAARADDALSWLPARLTALLLWLAARGGVRWGALRALARATPSPNGGWPMGAMALALGVRLSKPGVYVL
NAAGRAARAEDTRRAVDLASRSIAALIPLLLAALLLIAIVRRHV
>gi|319763919|ref|YP_004127856.1| type-4 fimbrial pilin related protein [Alicycliphilus denitrificans BC]
MVTVAILAVLAALAAPSFNPLIERWRVRQTVEGLQSSLYYARSEAIKRGGNVVVQKIPNNTDGCTTAPGT
NDWGCGWQVLACASINASGNCVTPTELQRFDAPARMQITRTSGGEAITLNRWGLVNGTWIGMSVVPQNKS
ISDAAAKGVCVSSGGRIRVISDPPCTSG
>gi|319763920|ref|YP_004127857.1| type iv pilus modification protein pilv [Alicycliphilus denitrificans BC]
MRPSIHRPRQSGITLIESLVAIVVAALGILGILGVQMRTLADTQTTVRRSQAIRLIEDLGERMKVNPNAL
ADLGAYVSAFSATPSAGDCKTKQCSRTELAVYDLGTWKQTVKDSLPLGQASIFLAPGETVAANRRLLGVM
ISWRENERDTAGDYKNNIDATKIRAADGSFSDGGGTAATCPADRTCHLQYIPVAARCAPYLGGGPTQYFC
PGS
>gi|319763921|ref|YP_004127858.1| hypothetical protein Alide_3249 [Alicycliphilus denitrificans BC]
MLPKTMTGRPHAQRGVTLIELMVGVAIGLLVVAVAMGALMVSRSVSGTVSDASEIQQQAAYAMRVIGLQL
RQAGSLYLNPNPTNAASDNVLTAPVAFETTAPASGSANGFDPGTNTLSGASDPVTLTVGYRRYKESVHGS
AVEQALARNCTGGPASTSDDQRVESVFQLNGSELRCAGNGASAQPIVQNVANFQVRYLLQDNTEPGNTKI
QYATADAVGAANWGRVQAVEVCLVLYGVEPIDMPSGSTYTDCDGSTKVDMSTLTGERTRRMHIAFRNVFQ
LRSQGLVGSVL
>gi|319763922|ref|YP_004127859.1| hypothetical protein Alide_3250 [Alicycliphilus denitrificans BC]
MQRTPPVHLRRQQQRGIALFVVIVFVMLSMLLALWASRTSLFNEMVVGNDADYQRAFEAAQALLQDAELD
IRGENANGSVCTGSGNVCRTSTPDKIPLEAKDVGPLLATLDLETTKCRNGLCAKRTAKQDFWNNTDTSKG
PTLAQMATSGVGARYGQYTGAANTTTDGPINPILADTSADTQGGWYWIEVLPYDESSKSSGLIVGGPNNL
LPLNLTPSVVYRITALAYGRKLNTMVVLQQTYAQQKLKD
>gi|319763923|ref|YP_004127860.1| fg-gap repeat-containing protein [Alicycliphilus denitrificans BC]
MPRKTPPRFRKTLLALAASTMLAPHGAWAIDLVQAPPGTVQPYVTPNVIISIDDSGSMDYRVDRESSSGA
TNNTTPNADGTWPGTSRRMNVLKYALQSIFDPTHEKYDSSLLPDKKIRLAWQAMNANNGNPGSLPGSTGS
TPTLATNSMQVLAGAHRANFLTFVSKLKPSSSTPSHKMFKQADEYMRANLDKNGPWASVPGTAATPYLGC
RRNYHIFMTDGRWNGSVSGGTQDDNTNNITLPDGTVYGSTTLANRPKNGLYADTYSNTLADWAFKSWSTK
LQTATDSNGVTGLKGTPQPTAEYNKAPATENFGKDTTGNDAILDRFWNPRYNPANWPHMVTYTIGLSKMA
YTWPGNKVSGSKDPAAPDTACTVIQAPGQGCATGNKATFDTDLMVPFSYDPGSNGSLPDFITGNIKWPDI
GSGGEPVRSLDLWHAALNGRGRFYAVEKGEDLAKAFRDIFQQINTQVDPDLTSTATSGSNISRNDVGKFT
GNYEPKNAWKGFVTAETVKKDGTTEPTTSWGGKNTADKLDAMDTSTRLILSWSDQWVTSKNKGGVAFKWA
SDQSNLSTDQKALLGKDPSDTTVTVATNGENRLNFIRGDRSLEGSETSGYSTSKPFRERKSRQGDIVNSV
VWYTGAPASNYPLKGYGAFTLARKSRTPMIYVGGNDGLLHGFSATDGTEKIAYAPRGVIASLPLLTDPAY
NNKHRFFVDGSPMTGDVDLGSPDPANPSSTVPDWRTLLVGTMGAGGKGYFVLDVTNPAPGDDGSVPGFNE
GSAQKLVVLDRTRGAEGTPNCAAMSGTQKTACETAVEEDKDIGNITARPVLDENNPMRTTQITRMNNDRW
AVVMGNGYNSANQRPVLLIQYLDGNKELKRISAATADAVGTDKANDNGLAAPRLVDLNGDGRADVAYAGD
NLGNLWKFDLTNVNDSNWSVAFGGQPLFTAKGPASLGSARTKLQPITTAPTVRANDRTMVVGTGTSAKAV
SVGGMMVAFGTGRNVTKVDENDATVQTLYSVLDNTRYRLVDTAKGKRLEVHPGGGTCPTGPNCVPAPAAL
GEDVVNAKLAAQKITAVGAAGYATVDVTDELKKETWVNFNGWYMDLPAVGERLLKPMEFYDGSNILAVYS
QVPAKGSDVDPNVESCESSTVDEERQYLTLVNIMDGKRPTVQLLDYDGNGMFYSPPGSGSSSGTCHTCGD
DKRVSRSQVTKGSHTIIKKGGSGDCQNLDIDAKNNKVAMACMPEQSLRPSWRQVK
>gi|319763924|ref|YP_004127861.1| fimbrial protein pilin [Alicycliphilus denitrificans BC]
MIQRMHEKQRGFTLIELMIVVAVVGILTAIAYPSYTEYVQRGHRADARAGLLQAQQWLERAATATGVYPT
TLPAALTWSGDTTKRYDIAFQAGNTNAAYTLTAVPKGAQTGDKCGTYTLSNTGVRGAAGKKSGESGYNPD
CWSK
>gi|319763925|ref|YP_004127862.1| riboflavin biosynthesis protein ribd [Alicycliphilus denitrificans BC]
MTDAAPFITQALGLAAQALFLSNPNPRVGCVIASGAGAVLGQGFTQQAGGPHAEVVALRDAAASGNDVRG
ATAYVTLEPCAHQGRTGPCCDALIQAGIGRVVASIEDPNPLVGGQGFARLRAAGIDVQVGPGAQQSRELN
IGFFSRMVRGMPWVRMKAAASLDGVTALANGTSQWITAPAARADGHAWRARACAVLTGIGTVLEDDPLLN
VREVATPRQPHLVVVDSRLQTPLGARLFDVPGRRVFIYAADGPPDRAQALRARGATVIVLPNARGKVDLP
AMLRDLGANGVNELHLEAGHKLNGSFLREGLVDELLLYLAPLLLGSGAHGLASWGPLQALADGVRMEFHG
MQQLGPDLRLIARVAGRADF
>gi|319763926|ref|YP_004127863.1| phospholipase d/transphosphatidylase [Alicycliphilus denitrificans BC]
MPAATTLPSPAACTPRRWCAIAWLALLCAGCAGLPKDVDRPVSTALDVAAQPTALAQLVQERRQAAGSRY
ASGFMLLSGPQEAYGSRLALVQSAQKTLDLQYYAIHADESSARLLRGVAAAARRGVRVRILLDDFHSTGR
NALVMGMAFVPNVEMRMFNPVAGPRASALGRLWGSLADFQRVQQRMHNKLFIADNMMGVTGGRNLGDAYF
GRSQAENFVDLDVLAAGPIVADMSRSFDSYWNNPRAYPVQSLITREELERLRAQVQPEGNGSPVADAPAP
ERPAHAWDSQPMDLRTAEFTWAPAAMLADKPAKIPLDGDEAQEFGDTVVDGLLDLMAGTQRELLVISPYF
VPGDDMLRAFAAARARGVRVRVLTNSLASNDAPIAHVGYARHRKALLAMGVELYELRSEQAGLRSALGSS
GGAAGSSRAMLHSKVMVVDGRLLVVGSMNLDLRSQLQNTEIALLIRSRRLAAEAAGQIDAAMRQGAWRLE
HQEEDRLVWHPPEGSGLQDAHTDPDSSLGLRLLLRLLGPLAPDHLL
>gi|319763927|ref|YP_004127864.1| dihydrouridine synthase dus [Alicycliphilus denitrificans BC]
MITKAPARKPLLLAPMEGLLDFVLRDVLTRVGGVDRCVSEFIRVTGSLLPDKVFLRYLPELRNGGRTLAG
VPVRAQLLGSDPVSMAENAARLAALGPEGIDLNFGCPARTVNRHGGGAALLREPEVIAAVVAAVRRAVPA
HLPVSAKMRLGYDDAGRARECAQAMEQGGACELVVHARTKADGYRPPAYWERIPEIREAVAIPVVANGEI
WTVADALRCRGVSGCDALMLGRGMVADPGLALAIRAQDVGQGAFALPWAALLPQLARFWQLVCEDLEPRQ
RAGRLKQWLNLLRRRYPEAQRAFDEVRVMTEQRAIGAWVARAVELAATAGGRAPAGPAA
>gi|319763928|ref|YP_004127865.1| methyltransferase small [Alicycliphilus denitrificans BC]
MIEWSERGEVRRALWRSESGAAAPRRVQPVDDTVAADIAYRLACEGTALLWRGDFQNARQLLQALMRRAD
RRPAKAAARAAQKMAEASPAERFHLHRQAQAQRTRTLGALLIPVEGDYSIALRRAPDWRTACTEAWGPAS
GEASAVALRELLGVVGAHEWRKKGVEVPVLGDRIHPHYGVFSPVRGEYIDLVAQAPLPGTSLAFDIGTGT
GVLAAVLARRGVRRVVATELAPRALACAQDNLRRLGLQDRVELLAADLFPPGRAPLVVCNPPWLPARPSS
AIEQAVYDEGSRMLKGFLAGLREHLEPGGEGWLVLSDLAEHLGLRSREDLLGWIAAAGLCVLGRLDTRPR
HGKAQDAGDPLHAARAAEVTSLWRLGATA
>gi|319763929|ref|YP_004127866.1| gcn5-related n-acetyltransferase [Alicycliphilus denitrificans BC]
MSSIQVRPATLRDAKAIAQVHTIAAMEAYRGLLPDDQLKAMSSVEKRQAYWREAIEYCEPQVQVAVEGDK
IVGFVGFDRSRDEKTRNTTGEIWAIYAAPSHWNKGVGLALWDAARDGLHEEGCTTVTAWVPLRNERALRF
HEMAGFKREMTTAKTAVIGGVKVEEVRLKRSIN
>gi|319763930|ref|YP_004127867.1| aldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MTPDDIRNLFDLQRQASRAQPDVPLMVRRERLLRMRKLLDEHGPALAAAVQADFGMRSPRLTEVADLFVL
RSQLAHTLRHLARWCRRTRVRTPLFLQPARGWIERQPLGVVGVISPWNYPVQLALAPAIGALAAGNRVML
KPSELTPHTSAQLAALVSQFFAPDEFCVVQGDAATAALVASLPFDHLVFTGSTAVGRRVAQAAAANLTPT
TLELGGKSPAIIDADCDMADAALKIAHGKLLNAGQTCIAPDYVMLPRGSEAAFADAFRAAVARLFPYFEG
NPDYASIISPRHLARLRTMLQQAQTLGAEVHAMEPVPGSPPPPPQGIGDGVGRQMAPVLVFGATPGMQLM
QEEIFGPVLPVLSYERLDDAIAHINARPRPLALYWFGRSEAVQGDVLRRTVSGGVSVNDTLMHIAHDNLP
FGGVGDSGWGAYHAEAGFLRFCHQKPVLAQSRWSLGHLLYPPYGARFDRIMALLRRLMQGGLNGQG
>gi|319763931|ref|YP_004127868.1| hypothetical protein Alide_3259 [Alicycliphilus denitrificans BC]
MRGPWPARPDVRKGHGLNEVVAGVIRWALRLVVFAMGVVLFLSLVVAAAVLALVWGLRALWARLTGRSAM
PWTMRMDPRTGWSTVYRSTARWTAQASSERRRSEAGGVHDITDVVPREIP
>gi|319763932|ref|YP_004127869.1| ATP-dependent chaperone clpb [Alicycliphilus denitrificans BC]
MRLDKLTTKFQEALSDAQSLALGHDNAYIEPVHLLAAMLRQEDGPRALLERAGANVPGLLKASEAAIKRL
PQVQGHDQVQASPELGRVLQATEKEAIQRGDQFIASELFLLALVDSKGEAAQIAKDNGLTRKSLEAAIDA
VRGGQKVDSAEAEGQREALKKYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGK
TAIVEGLAQRIVAGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERLKSVLKEVAQDEGRIILFIDEIHT
MVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVEEPSVEDTIAILRG
LQVRYEAHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAARIKIEIDSKPEALDKLERRMIQL
KIEREAMKKETDEASQKRLQLIEEELANAEREYADLEEVWKAEKASAQGSEQIRKDIDAIRIQIEDLKRK
GDYNRVAELQYGKLPELEKRLKEAQDSEAGGGAPRHQLLRTHVGAEEIAEVVSRATGIPVAKMMQGEKDK
LLHMEEKLHERVVGQDEAISAVANAIRRSRSGLSDPNRPLGSFLFLGPTGVGKTELCKALAGFLFDSEEH
MVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLDDGR
LTDGQGRTVDFKNTVIVMTSNIGSPLIQAMVGQDAEDIKEAVWGELKSHFRPEFLNRIDETVVFHGLDAK
HIEAIARIQLRLLEARLAKMDLSLQVSPAAMGELAKVGFDPVFGARPLKRAIQQRIENPLSRLLLEGRYP
PKSVIPVDVDPVKDPGVFHFGEARAAG
>gi|319763933|ref|YP_004127870.1| molybdopterin biosynthesis moae protein [Alicycliphilus denitrificans BC]
MTRVSIQTQDFDVSAELAALRARDARVGAVCCFVGTVRDRNDGDAVATMELEHYPGMTEQSIEAMIDEAF
ARFDLYGVRVIHRVGLLAPLDQIVLVAVTSAHRGESFQACEFLMDYLKTQAPFWKKEATPQGARWVDARV
SDDAALARWGIAAPPQAG
>gi|319763934|ref|YP_004127871.1| hypothetical protein Alide_3262 [Alicycliphilus denitrificans BC]
MALQTITTADYTLYPSPRNTHHVVFEFQTFVPQPYALIDLPSFGLAGRCSLFAAHRRADGKMGQLVTFEL
EVDQQRFERLFVPD
>gi|319763935|ref|YP_004127872.1| hypothetical protein Alide_3263 [Alicycliphilus denitrificans BC]
MQLLKQLFTTDVGLFSAVGIGFMLCMLGFFVWLFTRNDAPKAGDKQP
>gi|319763936|ref|YP_004127873.1| hypothetical protein Alide_3264 [Alicycliphilus denitrificans BC]
MHDGDNQILVPSSFIALYSDARQRLLAPADEVRARYELCEDLACHLVEQAQQLYHGGARSKEGVLLGIHA
GLAAPGACVSPQEARWITLRLAELLDWRSPALA
>gi|319763937|ref|YP_004127874.1| dihydrodipicolinate synthase [Alicycliphilus denitrificans BC]
MSSPHPSAGFSGLWIPLVTPFDGDGAIDHAALRALVQRLRSGGIAGVVACGSTGEAAALDTAEQDAALDA
VLAAAPGLPVVMGLSGYHLGHVLERVRGWNTRPLAGLLVPAPHYIRPSQAGLLQWFRTIADASMHPLIIY
DIPYRTGATLELATLQALAEHPRIRAIKDCGGDAAKTQALISGGRLQVLAGEDAQILSTLALGGSGAIAA
SAHWQPARFAELMRCVATGDLPRARALWQALLPVVQACFTEPNPAPIKALLAQQGEMGASLRAPMEHAST
GLARRLAALAAAQEAALNRL
>gi|319763938|ref|YP_004127875.1| molybdopterin converting factor, subunit 1 [Alicycliphilus denitrificans BC]
MTLKTIQVRYFASIREAVGTGHETLQTGADTLGALRDELIARGEPWAGCLARGRAVRMALNQVMAQDTTP
LAPGAEAAFFPPVTGG
>gi|319763939|ref|YP_004127876.1| molybdenum cofactor synthesis domain protein [Alicycliphilus denitrificans BC]
MTTQAKSQARAPLKPLDEALADLLAQAAPLSGTDTVSTFDADGRVLAQPAISPLQVPPQDNSSMDGYAVR
RADVTAAGVELPVAQRIAAGGCGTPLAAGTAARIFTGAPVPEGADAIVMQEDCEALDGGARVRVNAVPAA
GQWIRRAGEDIALGAQVLAAGTRLTPAELGLAASIGLASLQVARRPRVALFSTGDELVMPGEVPPAQMKP
GAIYNSNRFFLRAMLLRLGCEVSDLGIVPDRREATVAALREAAQGNDLILTSGGVSVGEEDHIKPAVESL
GRLDLWQIAMKPGKPFAYGRIGGAHFMGLPGNPVSSFVTFGLLVRPFLLRLQGVRDVAPKAIAASAGFDW
PRADKRREFLRVRHAADGTLELFANQSSGVLTSAAWADGVVDNPAGQTIARGNRVRFLPFVELLS
>gi|319763940|ref|YP_004127877.1| molybdopterin-guanine dinucleotide biosynthesis protein b [Alicycliphilus denitrificans BC]
MKVVGFAGYSGSGKTTLVEQLIPELRLHGLRVSVVKHAHHKFDIDHVGKDSWRHREAGAYEVAVASDRRM
ALMREFERAHAPSVHELLAELDPRADWVLVEGFKDSDLPKVEIWRAPSPEYHERPALYPHDPCIVAVATD
ASALPAPTALPVLDVRNPHAVAQWLLAQGARFDYVPQRVEVCE
>gi|319763941|ref|YP_004127878.1| threonine synthase [Alicycliphilus denitrificans BC]
MNYLSTRGDATSRKFCDILLEGLAPDGGLYLPERYPQVSDAQLTELRGAYRSQGYAELAFRILSLYIDDI
PPADLKRLCEKTYMAEVFGTREIVPLRHLEEGLWIEALSNGPTLAFKDMAMQLLGNLFEYELARRGEQLN
ILGATSGDTGSAAEYAMRGKRGVRVFMTSPHGRMSPFQQAQMFSLQDANIHNLAIEGVFDDCQDIVKAVS
SDHAFKARYKIGTVNSINWARLLAQVVYYFAGYFQATQTNAQKVSFTVPSGNFGNICAGHVARQMGLPID
RLVVATNENDVLDEFFRTGAYRVRGAADTHETSSPSMDISKASNFERFVFDLVGRDGARTRQLFAEGVAR
QGFFDLGTDPVFQDARAKYGFESGKSTHADRLATIRDTYERFGQIIDTHTADGVKVARERRGDPAVPMIV
LETALPIKFAETIQEALGRAPERPAKFEGIEQLPKRVQVLPADAERVKAYIAAHCD
>gi|319763942|ref|YP_004127879.1| pilt protein domain protein [Alicycliphilus denitrificans BC]
MRWLLDTCTLSETICPQPHPGVVDWLRRHGDDAAVAAASFGEIRYGIACLPPSAKRNQLQAWANALAQQF
DGRILDTDEVVWQQFGELKASLRAMGRMQDALDIVIAATALRHGLALVTRNTRHFEDTGIRLVNPWADAP
GA
>gi|319763943|ref|YP_004127880.1| prevent-host-death family protein [Alicycliphilus denitrificans BC]
MNAVWQVQEAKNRFSEVIERALREGPQTVTRHGKPVVRVVAVAGETHEPHADDGFVEFLLNAPKIEGGLP
EMPRDVSAGRAPLFGEE
>gi|319763944|ref|YP_004127881.1| homoserine dehydrogenase [Alicycliphilus denitrificans BC]
MKPIQVGLLGIGTVGSGVFNVLQRNQEEIHRRAGRGIEIAMVADLDAERARSIVGDKARVVGDAREVIAN
PEIDIVVELIGGYGIAKQLVLEAVAAGKHVVTANKALLAVHGTEIFKAAAEKGVVVAYEAAVAGGIPIIK
ALREGLAANQIQWVAGIINGTTNFILSEMRDKGLDFDVVLKEAQRLGYAEADPTFDIEGVDAAHKATIMS
AIAFGIPVQFDKAYVEGITKLAATDIRYAEQLGYRIKLLGITKRMDKGVELRVHPSLVPAKRLIANVEGA
MNAVVVHGDAVGTTLYYGKGAGSEPTASAVIADLVDITRLIEADPTHRVPPLAFQSHTLREAGQDLPVLP
MAEVVTSYYLRIRVADEAGVLARITGILAGGGISIDAVLQREADEVGGEGSTQTDLIILTHDTREGDMDA
VLAQIQGLPTVLAPITRIRKEELN
>gi|319763945|ref|YP_004127882.1| aminotransferase class i and ii [Alicycliphilus denitrificans BC]
MKPIHKSAKLNNVLYDVRGPIVDAAKQMEDEGQKIIKLNIGNMAPFGFDAPEEIQQDMIRNLPNSAGYSD
SKGIFAARKAVMHYTQQLGIAGVTLDDIYLGNGASELIVMATNALLDDGDELLVPMPDYPLWTAATSLSG
GTPVHYRCDEDAGWLPDLDDMRAKITPRTRGIVVINPNNPTGVLYPDSLLRGIIGIAREHNLVLMVDEVY
DKVLYDGVKFTSMASLSTDVLTLTFNSLSKAYRSCGYRAGWMVVSGPKADARDYIEGLNMLANLKLGSNV
PGQWAIQTALGGYQSINDLVREGGRLRRQRDLAYELITAIPGVACVKPQAALYMFPRLDPAMYPIADDRQ
FFMEVLRATRVMLVQGSGFNYPDNQHFRIVFLPHEDDLREAVSRLAGFLAAYRQRHAKAA
>gi|319763946|ref|YP_004127883.1| hypothetical protein Alide_3274 [Alicycliphilus denitrificans BC]
MKFQPDRFDVQTITAYGPGWINVDADRIEHSIIVGARGQRIAWDCSRFEDLAPAHFAQLAELDAEVVIFG
SGTRNRFPPPAWLQPLMARRIGLETMDTLAACRTYNILAGEGRNVIAALLLEA
>gi|319763947|ref|YP_004127884.1| hypothetical protein Alide_3275 [Alicycliphilus denitrificans BC]
MKSLIRLLLLLVTAVTCGFASAQPVTKIVVPFAAGGGTDVYVRLLASEITKAGVPVIVENKPGASGNIAA
DYVAKSRPDGHTVFVGTNSTMANNTVLFEKLPYDPLKDFVPVSHIGYQPMIIVARTDLPYGTLQEMVAYA
KANPGKINRGSPGAGIISNLAPLMFERQAGIRTTHVPFNGDAPGLQALLSGSIDIHGTSITASLPHVQSG
KIRVLGVMDHKRMSQVPNAPTFKEAGYDLEAYAWYALVAPAGTPREAVERLNKAVNDVLVREDFVAKAQA
MGMEPRGGSPDDLGKYIRKEYDRWVPLLKKLELTKSTY
>gi|319763948|ref|YP_004127885.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MTMEIAFTLEQQTFREEVRAFIAARLPSSIRERLRQGHLPNREDTITWQRILAERGWSAPHWPKEYGGAA
LSQAERLILLDELYRAPAPLPQIFNMNMLGPVLMKFGTSRQREHFLPKLANLDLWFCQGFSEPGAGSDLA
ALRTSARREGDFYIVNGQKTWTSTAQWADWIFALVRTDPQARKQAGISFLLIDLKSPGITVRPIRSIDGT
NHVNEVFFEEVKVPASQLVGEENQGWECAKFLLANERTGIANVGLCQERLELAREMAHAGALAQDPVLQR
EFAVFDAEIRALELTNARFLLTPSEQVALPAFASVLKLKGTEIQQELHMLLAKLAGEDGLEQPESAEHGP
HLVQRYLFSRALSIYGGTSEIQKDILARTVLA
>gi|319763949|ref|YP_004127886.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MNFETSDELKTVRDSLARVLADHYTPTHRQAMVGDETAYAAQAWKEMAGLGLAGLQVPEAFDGLDFQATD
LLPLFHELGQALAPVPFLSTSVLGATALQACSDAEVQRELLPPLAAGALQVTCPHGFVPAASGVRAQAQG
SGWRLEGVHKHMPYAASADWLVVSARTGDGAGGDACLFLVARHAPGVRLRPYRLIDGTPAADVHLEGAEA
TALCTPGSAQAHEAMEAANAAGIAAACAEMVGAMEAALRLTVDYVKTRQQFGRAIGENQALRHRIAEMLV
ALETARSMSIAAAVAVRDGGFAKAQTRADLHRAKFLVGRNARTVCQSAIQLHGGIGMTEEYTVGHYLRRV
HVLDQQFGDGVSHLKQLARVE
>gi|319763950|ref|YP_004127887.1| electron transfer flavoprotein alpha subunit [Alicycliphilus denitrificans BC]
MTALVIAEHDNTSIKGATLNAVTAAAACGGDVHMLVAGHNAGAAAAAAAQIAGVSKVIHADGDSQAHGLA
ESLAAQVLAIASGYSHILFPATASGKNAAPRVAAKLDVAQFSDITKVVSADTFERPIYAGNVIATVQSAD
ATKVITVRTTGFDAAAATGGTAAVENVAAVPASSRSQFVGSEIAKSDRPELTAAKIIVSGGRALGSAEKF
NEVMNPLADKLGAAIGASRAAVDAGYAPNDLQVGQTGKIVAPQLYVAAGISGAIQHLAGMKDSKVIVAIN
KDSEAPIFSVADYGLEADLFTAVPELVRAL
>gi|319763951|ref|YP_004127888.1| electron transfer flavoprotein alpha/beta-subunit [Alicycliphilus denitrificans BC]
MKALVPVKRVVDYNVKVRVKSDNTGVDIANVKMSMNPFDEIAVEEAVRLKEKGAVSEVIAVSCGVAACQE
TLRTAMAIGADRAILVETDAELQPLAVAKLLKALVDKEQPGLVILGKQAIDDDCSQTGQMLAALADLPQA
TFASKVEVAGDKATVTREVDGGLETLSLGLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLETLKPEDLGVD
AAPRIKTLKVSEPSKRGAGIKVPDVATLVDKLKNEAKVI
>gi|319763952|ref|YP_004127889.1| hypothetical protein Alide_3280 [Alicycliphilus denitrificans BC]
MRLLKRLKFAWGLACLGLACVAPGVQAQDAWPTKTVRIVVPFPAGGASTDGMARAFAQELAKELKNPVIV
ENRPGGGTSVATLAVKAQPADGHTLLFQADGLFNAKLATPELAYEASEFDIISPLAQTNYALIVPASRGW
KRLEDLQGLTRELDLGTLGIGVSSYSMLAARMAAHLRIKHRMVPYKGGVEGVTAVITGEIDGYFATVGLT
QTVKDNPKVKVLAYTGAPGRNTFMPGVKTFHELGMADMVFNSYYGLAVRADTPARIKGLLSATARKVVDS
EAMKAARQRLHLEDYVGSTEDYRRDVARMFKQYEAEFAEGAKAGK
>gi|319763953|ref|YP_004127890.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MREAVFVSTARTPLTKAHRGEFNITPGPTLAAFAVRAAVERAGIDPGLIEDVVMGCGNPEGRMARNIGRQ
AAIRAGLPLSVAGTTVSRFCASGLQAISEAAGRIVMDGEAALAAGGVESISGLKPPAPGAEGGSDPWIVE
HKPDLYMAMIDTADVVAQRYGISREAQDRFSLQSQLRTEQAQAAGRYRDEIIPVTTQMAVIDKATGAVSQ
REVTVDRDTCNRAGTTYEALAALEPVKGQGKFITAGNASQLSDGAAACVMMEGKAAERANLQPLGAFRGF
AVAGCEPDEMGIGPVFAVPKLLARHGLKVEDIGLWELNEAFASQVIYCRDRLGIPDELLNVNGGSIAIGH
PFGMTGARLAGHVLLEGRRRRTKYAVVTMCIAGGMGAAGLFEIF
>gi|319763954|ref|YP_004127891.1| hypothetical protein Alide_3282 [Alicycliphilus denitrificans BC]
MEMPKPEPTDLTRPYWDALHEGHLVFQRCSCGNAWLPARTHCPDCLKPEPRWERASGRGRIVSWVVYHTA
YHPAFADKLPYNVTLVQLAEGPRLLTNIVDPNEALAADAPVVLKIEWEGDTALARFRLDHIPA
>gi|319763955|ref|YP_004127892.1| hypothetical protein Alide_3283 [Alicycliphilus denitrificans BC]
MSLSGRYVIAGIGHTAFGKLPGQDTVSMNVEACRHALADAGVEKSVVDAVFVKVPTSAHQFMYGQKVAEA
LGITPRMGGCWDQGGAANVTLLSFAIMAIEAGQCDVALVCYADNPRTGNRAVYGRPRGDDAAYGWFSTAA
GYGMIHRRHMVEYGTRPEDFAAVAIASRKHGAGNPNAQLRKPLDLEQYMASPWVVDPLRKDDCALVSDGG
AALVVMSAKRAKELGVAQPVPVLGFGHGQTSFELPQRATLTSTEAARAAHTAFQMAGAKPQDVDVAQLYD
CFTVTVLMTLEDYGFCRKGEVGAFVRDGAIEHGGRLPVNTSGGLLSETGMPGLQLIMEGVRQMRGTARLQ
VPGAKLCVVSNQGGTMHTHGTLLLGN
>gi|319763956|ref|YP_004127893.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MSIDLDLLDGGIAVITLNRPEKRNALDAEHYQALSQAWIRVRDDDAIRVAIVTGAGDKVFSAGADLKSWI
GRKVPMSELWQTQKGMLLNRGLEVFKPVIAAVNGHCLAGGMTLMLATDLRVTADHATFALSEVKRGIIPA
NGGTQRLPAQLPHAIAMELLLIGDSIDAQTAARWGLVNRVVPADQVMATAIELARRVAANAPLAVQAIKE
LALRGQQADLAAGLRFEQLVQNTLQRTEDAAEGRQAFAEKRSPRFTGS
>gi|319763957|ref|YP_004127894.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MSNDSWELSEELRQIQDTVSRFMAAEVKPAEDKLPHDAYELPPEVLLPLQKKARDIGLWCVRSPEEYGGA
GLSLLGQAVVAEEAAKCRMGAYVPACGAFGADPPNAIWLGTPDQIQRYGVPGIEGGKKIYFAISEASGGA
DPARSIRARAVRKGGKYILNGSKMWITGAKGADWGIVFARTGEQGDRGGITSFIVNGNPEGMSLKPIPVI
RSYSPYEITFKDVEVPVEDRLGEEGQGFAICEKWLIEGRIPYAAGTIGVAQAALQIAIDWAKERETFRTK
LADKQAIQWMIADSEMELRAARLLTWQAAWIADLGRGDLKVASSIAKVTATETANRVVDRAIQILGGLGV
SQELPLERWFREMRIKRIGEGPSEVHRMVLARQLLGTR
>gi|319763958|ref|YP_004127895.1| CoA-binding domain protein [Alicycliphilus denitrificans BC]
MTATASRPLYRPDQLARTFAPRSIAVVGVSTNPGAFGSITYANIAGPGRFTGPVYMVNAKYKHIGDQPCY
PSIAALPETPDCVFIAVPRDAVEAVVAECAQRGVGGVVLFSSGFAETGLPERVAQQQRLLEIARAADMRL
LGPNCVGFMNYGLGLVGTFGTASYKGAPGPRATALVSQSGAVGAALAQAQEHGLALSHMLTCGNASDIDV
ADQVAYLANDPACQAIACVFEGMSEPSRFLAAAALCREAGKPLVVHKLGTSARGAQAAVSHTGSVAGSQA
AYRAAFEQAGVIMVDELEALLDTTSFFGKAPAPQARGVAVAAVSGGACILLADKAELHGVDLPHPAPATM
AVLEHLIPEYGAPGNPCDMTAQVLSAPQQLHDCFEALMADPQYGALVVPHTFAYAPATARIETLGKAAAE
HGKIACNVWMTQHLEGPGAIESEQNPHVATFRSMNHCMAALAAWHKRDDWLRAQGPAPARLSPAQAHERA
AALIDASPNATLTEREGKEALAAYGVPVVRDRLTHSAEEAVAAAREVGLPVVMKVESPDIPHKTEAGVIR
LGLKTEDEVRAAFAQVMRNAQTVMPPARIAGVLVQPMVPQGTEIMVGARIDPQFGPMVVVGLGGIFVELL
KDTAVRPAPVGRQEALKMLGELKAQGALNGFRGAQPVDRKRLAEVIARISEFAADQRDRIAELDVNPLIC
AGGRIIAVDALIAKQTP
>gi|319763959|ref|YP_004127896.1| hypothetical protein Alide_3287 [Alicycliphilus denitrificans BC]
MTETSPNVAERLATSPLEQYRAHLTQGHLAFQVDEDGRALFYPRVAAPVDYRGKLRWATSAGLGTVYATT
FISPKGEPSYNVALIDMDEGFRLMSRVESIPADQVRIGMRVKVRIHPAEGDEGPYPVFDPLEAA
>gi|319763960|ref|YP_004127897.1| thiolase [Alicycliphilus denitrificans BC]
MNATLKRGSAAIVGVAESDLGEVAAGMSVIDLMAQGVHRALADCGLTPADVDGVFAAAGQVRMPSTALCE
YLGLKPRYQDCTMMGGSSFMTHVAHAQAAIELGLCEVAVIAYGSTQRSAGRKNVAPREYNPYETPFRPVL
PASAYALAASRHMHQYGTTREQLAQIAVAARQWALLNPAAWEKEPLTVEQVLAARMVSHPLTVRDCCLVT
DGGGALIMTSAARARTLRKPAAYVLGVGENISHQHISNMADLTVTGAARSGAQACAMAGLGAPDIDVVQV
YDAFTITTLLFLEDLGFCPKGEGGRFVSDGAIAPGGRLAVNTNGGGLSYCHPGMYGLFVLIEAVRQLRGE
CGARQVVGCETAIAHGNGGVLSSQSTVVLGTAATL
>gi|319763961|ref|YP_004127898.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MSSIDIERRGAIAVITINNQAGRNALDMRMRQDLLALVREVSEDEAVRAVVLTGAGNAFCSGADVGKMGG
RDLAGSRQRMKTMHAMVRAVHGMDKPVVAAVCGPAVGIGFSLAMACDVVVASPGANFSQVFTQVGLAPDG
GAIWFLARQMGFSRAKELVFSARKFTGEEAAALGLVQRLVPQESVLDEALALASQYAQGPGLALTMAKQL
FAHSIAPTLEQFLEMELLVGPQLSQTRDHAEGRTAFKEKRKPQFTGQ
>gi|319763962|ref|YP_004127899.1| 3-hydroxyacyl-CoA dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MPSNHYSVHGGSAVITLSNPPVNAMGHAMRQELAAHLEAAWADPQVHSIVIIGAGKLFCGGADVKAFNTP
ASRAEPSSRTIVKQIEASAKPVIAAIHGSALGLGLEFAMGCHYRVAQRGAKLGLPEVKLGLLPGGGGTQR
LPRLAGVEAALRMIVEGNSVTADEALKLGLVDEVAAQELLPAALAFAARMSARSEHPVASRRQAQAPAEA
GWFDAQRDKLHKSKRGLPAPLECLACVEAAVNLPFDEGMKFERERFDVLVNGTESKALRHLFLAERAAAK
IAGLAADTPVIPVRSVAVIGAGTMGGGIAMSFANAGIPVMLIEAAQEALDRGMATIAKNYDGTVAKGKLA
REEADARLARITPTLEFERVADADLVIEAVFESMEVKKELFRKLDALCKADAILATNTSRLDVNEIAATT
ARPASVIGLHFFSPANVMRLVEVVRGQATAPSVIASSMAVSRQIGKLPVLVGVCDGFVGNRMVGQYAREA
EFLLEEGASPQQVDAALQKFGLAMGRFAMSDLAGLDISWASRKRAAPTRPAHLRYSKVADRLCEMGRFGQ
KTGAGFYRYEAGSRTPIPDPIVQQVIEDCAREAGIERRVIDDAQIVERCIYALVNEGAKVLQEGIAQRSS
DIDLIYVNGYGFPAWRGGPMFYADTVGVDKVYQRICDFHEKHGAFWTPAPLLKKLANEGRSFKELGDGAR
SA
>gi|319763963|ref|YP_004127900.1| transcriptional regulator iclr [Alicycliphilus denitrificans BC]
MIRAVGRALAIFDAYDNEHLSLSLQEIAERIRMPKTTAFRLVNTLERAGFLIRMDNQQYCLSLKMARLGG
LVRSTLSIREIARPVMLQVNAQTSETITLNTIVGNDRMVLEVVDTPAPLMSMARQGQHMPLYLGASSRIL
LAYMEPQDLERLVKVNMNVPDFDRAAFDRELARFRRQGYAISRGQRVPGLTAIAVPIFDINGEVRHCLAL
TGPSVRVDSRDQELADILLVAGRDISTRLGASPEHSADLKLLMADTTADVPGRGREKPAAKKAPARKKVV
ASAAQ
>gi|319763964|ref|YP_004127901.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MQENNLSEAQQQIEMLRESAADFVGRNTDMKRLRERRGILPGYEPEHLRHMAELGWLGIVVPEAHGGLGL
GFCELAVVLQELGKGLMADPLVPVAFAARVLQHGDNEGLKQSLLPQVVDASLLPCVAWQEGLGGIETAAI
ETRVEADGADLLLSGRKRFVAGAAGAGGFVVSARGAAGCGLYWVDAQAAGLTVGHEQRADETPSGVLEFD
RVRITPANVVSAAGPQGLAALDRALDEAAVLAGAEMLGVVEAALHMALGYMRTRVQFGKPIGSFQALQHK
AADLYVQQELVRAVLAEAVRVLDADTPAQERASMASRFKARASDGGLRVTREVIQLHGAIGFTDEYDAGL
YLKRALVLSAWLGNASAHRRRFAALQQEVTV
>gi|319763965|ref|YP_004127902.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MADQAPQTDWNHLDDEEFRRVAAEFFATHVPRHLRFLSRRPRWSEVKEWYLTLSARGWLMPNWPKEWGGM
GLTQSKILVYLEELERSGAPRVMDQGQMNIGPLLIARGTDEQRARFLPKILSGEHTWCQGYSEPNAGSDL
ASLRTEARIEGDEFVINGQKIWTSVAFDATHMFALVRTDKTVKKQAGISFVMIDMRQPGVTVRPIRNIAG
HEELCEVFLDNVRTPKANMVGKLNDGWNVAKALLGFERIWSGSPRQSMLALLRLQKLAKASGKMADPAFV
DKFTQVTMDVLDSAAAYERFAQIMRTGGSFGFEVSMLKIWATETCQRVTELMVDAAGDLGALGGDVDVDG
QEMDILYPFLECRAFTIYGGSSQVQRNILAKNVLDLPS
>gi|319763966|ref|YP_004127903.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MTLDYSRYQYLSIQCDNGIATLMLNQPDNRNAIHAEMHAELEHVWLDLQADPQVNVIVLTGAGKIFSAGG
DIKRMINRFGTDEGWQTSLAIPASTKRLFQGILEVEKPIVAAINGDAVGLGATLALFCDATVIAEGAKFG
DSHVKVGLVAGDGGAVIWPILVGPNRAKEFLMRGKLMSGKDAHAMGLVNHVAPAEQVLESAMQIARELNA
LPPLAVRWTKLSVNKWIKQQLNLILDASIAYEMLSINSQDHHEAAKAFLEKRAPVFKGN
>gi|319763967|ref|YP_004127904.1| gamma-bhc dehydrochlorinase [Alicycliphilus denitrificans BC]
MERNCQAMLQDLMDKEAIRDCLYRYCRGIDRADEAVLRSAYWPDAHDRHGAYAGDAEGFFAQALPRLRSG
GRGAHQISNILIELHGDVAAVESSFLALQASAAMPTRETFLCGRYLDRFEKRQGQWRVANRLVVYDWIEE
RIRPELAREDADLFGKRRPNGGRLPKDPLYAFLDTVRATPTPLGREDAI
>gi|319763968|ref|YP_004127905.1| hypothetical protein Alide_3298 [Alicycliphilus denitrificans BC]
MRDHLNNVTRRHTLITLAAAAAPWAATTARADTYPSRPIRIVVPYAAGGFTDIVSRLVAQKMSVKLGQPV
VVDNKAGGSTIIGAEAVARSAPDGYTLLMAVTTTISTNPFLFKKLPYKPSDFVPVALTGLTPFVLSAHPS
VPANTLRELIAMEKAKPGTLNLATLGTGSSTHLVGEMFNSLAGVKLNMIPYKGAGPALNDLMAGHVQLYF
DGIATSAPLFRAGKLKGIAITGDSRSQAAPQVPTFAESGLPEMQAASWYGLLAPAHTPQAIIELLNQATN
EALQSPDVRARVAQDGASAPALSPQQFGELIDKHSRTWERIIKPLNISLDV
>gi|319763969|ref|YP_004127906.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MAHALAAQGCAVVLNGFGEPQAIASLCEELAGTHGVVVEHAGADLMLEEQASGLVPQVLARFGRLDILVN
NAGTQHKGPIEEHPSQRWREVFALNLDAAFHTIRTALPSMRGAGWGRVVNIASVYGLAGGVDRSSYVASK
HALVGLTKAVALETAATPITCNAVCPGDVSTRIFYRNAKLLAEREQITRAEAQRRIAATNMPSGRVVSPE
QVAALVAFLCTEAAGEIRGAALPVDGAWLAR
>gi|319763970|ref|YP_004127907.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MQTSPTHPGALSHLRVLDLSRVFAGPWAGQMLADLGAEVIKVERPGEGDDSRRLGPPFLRDDAGQPTRDS
GFYLSANRNKKSVSVDISRPEGQAIVRALAQSCDVLIENYKVGDLARHGLDYASLRALNPRLVYCSITGF
GQTGPYRKKPGYDSIFQGMGGLMAITGHADGEPGGGHQKVGLIVSDLMAGMYASVAILAALEHRDAVSGE
GQYIDLALLDSQVAALSHSAMGYLVSGDPVPRCGTKSPTAAPSQMYRCQDGAVMLVVGNKAQWEKFASVM
GQPQLPGDPRFATNQDRIRHRDELNAILEPIFFSRPKQYWIDALAEAGVPCGPVNEMHEVFADPQVRERE
MVVHMQHPRRGAMPMLANPIRLSGTPVQYRMPPPDLGQHTDEVLVQLPGYDAARLKQLRDDGVI
>gi|319763971|ref|YP_004127908.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MKSILLLENKLALVTGAGRGIGRAIAVAYANAGARVIVTDLSEAACADTRAEVGAAGAQAWTYALDVCDA
DACARLADTVARELGDLQVLVNNAGLMIREKVDSPRAAHAVRQLMEVNYFGTFNVLHAFLPALRRSHGCV
INLASGAALTGLPGCVGYSPSKGAVKMLTQAMAADLGTDGIRVNAIAPGVIETAMTESTRQDPQRLGGFM
ARIPAGRLGRAEEIAGPAVFLASDLASYVNGITLPVDGGKQAV
>gi|319763972|ref|YP_004127909.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MKNLQGRVALVTGAGSGIGRSDALVLAERGATVLVNDFDPRAADETAAQIGEAGGCAVPCVADVGDAAAI
AAAIDAAQRQAGAIDILVNNAGISGRQQAFDAIADADLARMFQVHVMGAWYCTRAVQPGMKDRGRGKIIN
TSSILGMAGRRRSAHYAGAKAALIGLTKAWAKEFAEWNIQVNAVAPGRVRTPILGAFADSEEYQRDLLAN
VPLRRRAEPEEVAWLVAFLASDESDYITGQIISPNGGEVV
>gi|319763973|ref|YP_004127910.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MSYPFAGVTVLDLTQIYNGPYATFLLAQAGADVIKIEPPGGEHLRKRSGASGAAMPFAMLNANKRTMTLN
LKSPPGRELLLELVKQADVLVENFAPGVMDRLGLDEGVLRQANPKLIYAAGSGYGKTGPYRDYPAMDLTV
QAMTGVIDTTGHTDAPPVKSGPAIADFMAGIHLYGAIATALYEREHTGNARTIEVSMMEAVYPTLASSLG
LFYGSGEAPRTGNRHTGMSLCPYNVYPTSDGYIAIITNNEQHWRSLVDALQCQHLAQDPRFATVKERCNH
MDLVDGALGKITRGYTKADLFERLIRNRVPCAPVRTLEEVVNDPHLHARGSLQWIDHPEYGRIVVPSTPL
RFGGEDAAVAYRPSARLGADTEAILRERLSLDDAQVEALRAQQVV
>gi|319763974|ref|YP_004127911.1| extra-cytoplasmic solute receptor [Alicycliphilus denitrificans BC]
MRTLIATTLTLAALLAPAAHAADPWPTKPIKLVVPYTPGGLTDVLARVVGQKAGATLGQPIIVENKPGAS
TLIGAEYVAKSAPDGYTLLMTGTTTLTTNPLLMKKLPYKVADFTPVALVGMVPFIAVAHPSVPANNLQEL
LAYAKANPDKLTYSTSGQGTSSHLVAAMFAAATGTKLRDVPYKGSGPALNAVLSGEVSMTFDGVTLYIPY
VNTGKLKAIALTGDHRLPALDKLPTLAESGYKDAVATALFGIVAPAGTPRPVIHQVNAAVQRAMADPEVV
ARLRDFNAYVEPRSAEAFGELLQREAELWGRIIAPLNIQLD
>gi|319763975|ref|YP_004127912.1| NADH:flavin oxidoreductase/NADH oxidase [Alicycliphilus denitrificans BC]
MLFSPLQIRSITARNRIAVSPMCMYSSVEGMPNHWHLVHLGSRAVGGAGIVMTEACAVSREGRISPMDLG
IWSDEHAQALQPVVEFIRQAGAVPAIQLAHAGRKAATAVPWLGHKPIYDQPHGWMPLGPSPIPYANGYPP
PLEMGTADLKKVVDDFSAAARRANTAGFEVIECHMGHGYLLHSFLSPIANQRRDDYGGSLENRARLPLQV
AAAVRESLPQQLPLFVRISCTDWVAGGWDLAQSIQLAKWMKEVGVDLIDCSSGAVTADSPVAAAPGFHVP
FATAIREQAGIATGAVGLITEPAQAEQIVGTGLADLVFVGRGFLDNPYWALHAARKLRANADWPVQYARA
VGVPRS
>gi|319763976|ref|YP_004127913.1| methyltransferase type 11 [Alicycliphilus denitrificans BC]
MTRLVNDEIDILAELVPAPGPQVIELGCGAARMARQMLQRWPGLRYVGLEVDTIQHARNLQDPPAGMRFV
AAGAQDIPCEDGQFDLALMLKSLHHVPLDAMDQALAEVARVLRPGGYLYVSEPVFAGPLNEVTRLYNDEG
AVRAAAQAAVDCALAAHASPWREMAQRRFDMPVEFSDFADFEQRMMRPSFADHHIDDALQARVAAAFAPH
CTPQGARFVRPMHVRLLQRKS
>gi|319763977|ref|YP_004127914.1| methylated-DNA/protein-cysteine methyltransferase [Alicycliphilus denitrificans BC]
MPLLYCHLPTPLGEMLAIASSQGLCLLEFVGQKGVEREQAQVEAARGGPAREGMNAILEQTRAELAEYFA
GQRQAFGVPLDLVGTPFQNDAWQALRAIPYGQTRSYASQARAIGRPTATRAVAAANGQNKVSIIVPCHRV
IGSDGSLTGFGGGLPRKQALLALEGGGMLF
>gi|319763978|ref|YP_004127915.1| cob(i)alamin adenosyltransferase [Alicycliphilus denitrificans BC]
MQTETPPSDKPYDKPEGERRGLVIVNTGDGKGKSTAAFGLAFRATGRGKAVKVYQFMKVPSARFGEHRLA
EQVGLPVEGLGDGFSWKSKDLEHSAQLARDGWAKARAAILSGEYFLVVLDEVTYPLIYGWLPLQEVLDTL
AARPGDVHVCLTGRRCPQEIIDVADTVTEMRLVKHAFQAGVPAQRGIED
>gi|319763979|ref|YP_004127916.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MKKIAVSARQISASMQNNAILHGIDLDLPQGRWTSVVGPNGAGKSTLLKALAGLLRHARVQGQVALLGRP
LAEIPARERARQLAWMGQNESAAEDLPAYDIAMLGRLPHRPWMAPPSSADHAAVQAALRTTQAWDWRDRP
LSQLSGGERQRVLLARALAVQASVTFMDEPLANLDPPHQTDWLHTVRSLVAAGGTVVSVLHEISIALQAD
DMLVMAAGRIAHHGPCQDGATHAALEQVFERRIQVRQIDGMWMALPRV
>gi|319763980|ref|YP_004127917.1| transport system permease protein [Alicycliphilus denitrificans BC]
MSAVMPPATLAAAPAAGQRRALWLALWLLLASGALLVLGASVGSTGFDSVLHAGRDPLARQIVWDIRLPR
TLGAWLAGGLLGLAGAIAQGLFRNPLADPYLLGSASGAALGGAVAMAMLGVSPTTASWLAGLGVTSAAFI
GAAGAVLLTLVLARGVQHTLRLLLAGVIVGVVLSAARDLIQVAKPQILESMQVFTMGSSAFVGWQACALM
AGSWLLCTAAAWTLSRLLDGLMLGEATAASLGLPLAPMRAGLVLAMALATGTAVAHTGLIAFVGLAAPHL
VRSIARVTHQWHVWLSSLMGAVLLLAADILARWLIAPQELPVGVLTAALGGSYLLWLMHRRTLAVVL
>gi|319763981|ref|YP_004127918.1| periplasmic binding protein [Alicycliphilus denitrificans BC]
MKPTPVRRILWVVAILVLLGLLMAGLARAQPIQITDDRGKVLRFDAPPRRIVSLLPSLTESVCELQHCER
LVGVDRYSNWPAFVRTLPQVGGGLDPNIEAVVALRPDAVLLSVSSRVSDRLEALGLKVAALEPKTHADVR
RVLGVVGDLLGVPPQQGAQRVWREIDAAVSAAAQSLPARARGVRVYFEVNRGPYAAGGSSFIGETLARMG
ARNVVPDTLGPFPRLSPEFVLRAQPDLVMISNRTGEPLTLYPGWQNMAAVKAGRLCEFGPAQSDVLIRPG
PRMAEAARIMAGCLSGKFP
>gi|319763982|ref|YP_004127919.1| adenosylcobinamide-phosphate guanylyltransferase [Alicycliphilus denitrificans BC]
MHTIARSELILGGQKSGKSRRAEMLARQWLAQSPAHRALLVATGQPWDDEMRARIARHQRERAERVPGLA
TVEEPRDLAAALARHGAPGTLLVIDCLTLWLTNWLMPASAPEYESNQPPGKDWKAQAALFLEAIRQTPGP
VVLVGNEIGLGVIPMGREVRAFVDALGTLNQQAAQACARVTLMAAGLPLFLKNP
>gi|319763983|ref|YP_004127920.1| cobb/cobq domain protein glutamine amidotransferase [Alicycliphilus denitrificans BC]
MSHAARCPALVVSAAASGQGKTTVTAALARLHARQGRRVRVFKCGPDYLDPYWHQLASGAPVEQLDLWMT
GPADCAARLHAAACEADLILVEGVMGLFDGEDCVADLAQRFGMPVLAVVDAGAMGGTLGAIVHGLRHYRE
GLPWAGVLANRVAGERHAGMLRAGLRDGADWLGALPRLALDADGRAPLLPERHLGLVSAHELPDALQRLD
AAADALAGTPLGRMDAQALRRFAADFAAPPACAPVPPLLAGRTVAVARDAAFCFIYPGNVQTLQQLGARV
VFFSPLHDAALPPCDAVWLPGGYPELHAAVLAANGAFQASLRAHVQAGRPLWAECGGMMALCDAITLHDG
RTVPLWGLLPGRVVMQRRLAALGPQQLALPQGCLRGHTFHYSTCDSTAPVDARTARPGQQGSPDAGEAVF
RAGGLRASYFHAWFASSPRATAALFGVEGA
>gi|319763984|ref|YP_004127921.1| tonb-dependent receptor plug [Alicycliphilus denitrificans BC]
MAACAVQAQQGAAHVLDDVVVTATRTAQPLTDVLADVSIVDRETIEQSGTTGLGDVLARLPGIEMARSGG
PGGTTSMFVRGAETRFTAVYVDGVRVDSQAGSGGTTWEAIPLAQIERIEVLRGPAAAVYGSDAVAGVIQI
FTKKGEAGVAPYVGVGAGSHGTYRAEAGVSGASGAVDYALGITRETSKGFNAKKDGNPDRDDYRGTSASG
RLGWQLNTAHRLEGNFLYNDTDSGYDVSKTADDRSLHRLQALGLGWQAQWSDSYKTRLSVTDSRDRYETR
PSVYFTDTRLRGYLFFNELRVGAHQFTAALERREDELTNESVSSGMRSRAQNALALGWGLRMGAHTVQLN
ARHDEDSEFGGKTTGSAAYGYAFAPGWRATASAGTAFKAPTLYQRFSMYGDDTLRPETSRNVELGLKWAE
RSNSFSATVYRNNVSNLIDWQGNTGTCAGNSGPYPGCYANVGRARYEGLTLAGAYGLGGVQLRGSLDLQN
PKNLDTGRQLGRRAKQHAVLGADTRLAGWTLGAEAQVSGKRYDNNNANAPQLGGYTLFNLYASTRVARDY
LVYARLDNLADKNYELARNYATAGRTFFVGVKWAPAH
>gi|319763985|ref|YP_004127922.1| hypothetical protein Alide_3315 [Alicycliphilus denitrificans BC]
MDHPSSLDQIAERVERLLLRHAELQRTNALLAQQVSALTQERDSLKSRLQAARARVDALLDRLPATSAPA
APTETKDAP
>gi|319763986|ref|YP_004127923.1| hypothetical protein Alide_3316 [Alicycliphilus denitrificans BC]
MKQIEVQILQQSYLLACPDGHESRLLEAVERVDTAMTRIRDAGKVRARERIAVLAALNLAFEIADREASE
LAAATAQRSAPPAAADAGNPSPSPAQEQRMQQLLLRLDEALGDDGRLL
>gi|319763987|ref|YP_004127924.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MIISGHSFAAIWNGIDLAAWLVDGHALQIRHANEAAARLVGRSVADMEGMPVHGLVVTPEDLIFWGQSHA
GIAAGIHSHTWVRNMHSGNLVPVDRRVLAIQASEGDPADRYLLLTMQDRSEHEASQRELESLLSELRATL
DSAADGVLTCNLHGEIRAFNQRLAQIWQLPRELLLRRDDAAIRVHMESQVLDAEAYRLRLAAIAHEPMLE
TTDILHLRNGMTVEQRSVPQLIQGRPAGRVYSFRDISRQAEVQAGLRLAARVFESSLDAIFIADERHAVA
RINPGCEQLLGAAAQGVVGRLVTTLFAMAQDDAEFMAEVRQGWEQAGFWEGELRLRQEEDEHCCVQLSWV
ALRDDAGAVAQSIGFMRDLSVQHAAQKRIEELAYSDVLTGLPNRLPLNKRVAAAIEASRGHGGGFAILFL
DLDRFKNVNDSLGHPFGDRVLKLVAERLQGCLRQSDMLCRLGGDEFVIYLHDADAAIAESVARRVQEEML
RPFMLDEMGFSIQCSIGMSLYPQDGDTLDDLIKHADTAMYRVKERGRGSYGFYQPQMNAHLLSRMKMEHA
MRQALSHGHIEVHYQPQVDMATGRIVGAEALARWTDPEFGVVSPGTFVPLAEESGYIVTLGAWVMEQAVR
EAAHWMGCGTPMVVSVNVSALEFRQAGFVERISALLAQYGLPARWLELELTESVLLQDAQEMQQVLDALA
RLGVGLSIDDFGTGYSSLAYLKKLTIHRLKIDKSFVGGLPGDGGDCAIVQAIVSMGRALRIGVVAEGVET
QAQRQALQGMGCDCYQGFLCAPAMPAADFRARMAEPATGAKRIAQAAAGGDRLAKR
>gi|319763988|ref|YP_004127925.1| metal dependent phosphohydrolase [Alicycliphilus denitrificans BC]
MFIQLEVGWMNHPFPMNSFRISSHEQIRVLRDLGLKSVRHIPAKSTALAQTPSEAPERMADVQPEQDDVG
EPAVERLGRSTTAQAGVRALYNATQQRCRQRYQEAATVYESVCAGVQAAPQKVREQAESLVRACVAQLLE
QGPYAVHLLADSLGQRSAGHAVNVLVLALLLGRALRMEARELCLLGTAALLHDLGKVGLPIHIAEPGAAL
NLSDMQRYQEHVGLSVDLGQRMGLSSDVLIAIAQHHEMADGSGFPLRLVGEDLSRCGQILALVNRYDRLC
NPLHGEQALTPHEALARIFALRRECFDATVLGAFIRMMGVYPPGSLVQLVDGRFGLVVVVDALHSLRPCV
VLYEPAVPRDEAPLLDLAQNDEVGILRSLKPAQLPRDALDYLLPRPRISYFFERALSPRDCGGSA
>gi|319763989|ref|YP_004127926.1| hypothetical protein Alide_3319 [Alicycliphilus denitrificans BC]
MLLALASTAFFMGLMGGTHCLVMCAAPCAALTGAGGAPGGSEQVVRWMPRGSVAQRTVGFHLGRLTGYGV
AGALAAFAMERLAWLSQGSAALRPVWTMFHVLILAWGLLMMLQVRQPAWLEGAGRAVWGRVRSLVSRPGG
LFVTGCAWALLPCGLLYTALLTAALSGSVQRGALCMVLFGVGSGVWLVVGPVAWGRFRARVNGVAGTWGP
RIAGLVLFTLGAGALWMDVVHGQPAPWCLP
>gi|319763990|ref|YP_004127927.1| oxygen-independent coproporphyrinogen iii oxidase [Alicycliphilus denitrificans BC]
MTVVTTELLRRFDVPGPRYTSYPTADRFVEAFGEKEYILALQQRRVGSAAKAMPLSLYVHIPFCESLCYY
CACNKIITRHPERAEVYLRYLSREIDLHTAHCGVGQHVSQLHFGGGTPTFLSDDGLRELIGMLKRSFVLV
PGGEYSIEVDPRTVDEKRLALLAELGFNRLSFGVQDFDPEVQKAVHRIQPAEKVFALIESARKLGFESVN
VDLIYGLPRQTPESFDRTLAQVAQLRPDRIALYAYAHLPERFKSQRRIISAELPMASAKVSMLARSIDVF
MNAGYVYVGMDHFALPEDALAVAKRQGRLHRNFQGYSTQPDCDLIALGVSAIGRVGATYSQNVKTLDEYY
DAINHGHLPIVRGLALTRDDLVRRAVIMALMCQGEVLFEPVEQSWLIDFRRYFEAELQQLEEMAEQGLVK
VGAEGIEVTTMGWFFVRGVAMVFDKYLQADRNRARFSRII
>gi|319763991|ref|YP_004127928.1| cyclic nucleotide-binding protein [Alicycliphilus denitrificans BC]
MNRVSTHSNLQSIKVACSNCNLRELCMPVGLDEQQLKRIDDVVAVRRKVKRGGTLFRNGEPFASLFAIRT
GFFKTCVATEDGRDQVTGFQMAGEIIGLDGIVNDRHTCDAVALEDAEVCVMPFDRIEELSREVTALQNHV
HKIMSREIVREHGVMLLLGSMRAEERLAAFLLNLVQRLHARGFSQSELVLRMTREEIGSYLGLKLETVSR
TFSKFVEEGIVEVRQRHVRIVDTDALKRIVNSQQSCL
>gi|319763992|ref|YP_004127929.1| hypothetical protein Alide_3322 [Alicycliphilus denitrificans BC]
MWKQRLMWIAWPAFLMAGVMEMVVFAFVDPEALQWFDQPVTLSRQGVYTVAFFVFWAIIMASSMLTTMLS
LSPFELNRCPVPEGERPLDCAKYMP
>gi|319763993|ref|YP_004127930.1| hypothetical protein Alide_3323 [Alicycliphilus denitrificans BC]
MSKDGPMNADPEPQPWWRYGHVWLIIAGPVIVVIAGFVTLWLALSRPDPVLAEDYYQRGLDINKTLKNAD
SGMTPAMKGRNHAATPAQDQPR
>gi|319763994|ref|YP_004127931.1| cytochrome c oxidase accessory protein ccog [Alicycliphilus denitrificans BC]
MKPAEDRPRKVIPITPVAAESQQPETVSLYEAQKKIYPRSISGVFARWRWAMVFLTQLVFYGLPWLEWGQ
RQMVLFDLGARRFYIFGLVLYPQDFIYLTGLLIISALSLFLFTAVAGRLWCGFACPQTVYTEIFMWIEHK
IEGDRSARMRLDNGTWTFEKIWKKSLKQVIWVAVAFWTGFTFVGYFVPIRELGGELLVLHGSWQIFWVFF
YGFATYGNAGYLREQVCKYMCPYARFQSAMFDKDTLIVTYDPERGEPRGPRTKSVDYKAKGLGDCIDCTL
CVQVCPTGIDIRNGLQYECIGCGLCVDACDTVMDKMKYPRGLIRFSTQNGVKNHWTQSQMLKRVLRPRVL
FYTSVLIVLCIGMLASLVVRTPLKVDVVRDRAALSRIVAGGKLENIYRLQIMNATEGAQRYVISARGLPG
LEVASESEVDIGPADSRWVAVRLQIPYGSAPPGSHTVYFDIQAQGNKGQVAEKSVFLVPR
>gi|319763995|ref|YP_004127932.1| cytochrome c oxidase, cbb3-type, subunit iii [Alicycliphilus denitrificans BC]
MSDFTSNFWSIYVAGITIIGIIGCGLLLWITSRKKVEATADNTTGHVWDEDLTEMNNPMPRWWMWLFVLT
IVFGFGYLVAYPGLGTFKGQLGWTQLGEYQQEVEKANTELQPLYARFASMTTEDMAKDPAAMAIGERLFM
NNCAQCHGSDARGSKGFPSLADGDWLHGGAPDDIRKTIHDGRVGVMPPMAAAVGSPEDVRNVTHYVLSLS
GSPHDSLRASLGKSKFAACAACHGMDGKGNATRRWGAPNLTDDIWLHGWGEAAITAMINNGKTNEMPAQA
GKLTDAQINVLTAYVWGLSHKAGASR
>gi|319763996|ref|YP_004127933.1| cbb3-type cytochrome oxidase component [Alicycliphilus denitrificans BC]
MDITTMRIVVTLASLACFVGIWFWAFMRRNKTRFEEAAQLPFTED
>gi|319763997|ref|YP_004127934.1| cytochrome c oxidase, cbb3-type, subunit ii [Alicycliphilus denitrificans BC]
MSNTQNNTSSGFTHEKVETSNFLMIVLILLVVAIGGLVEIVPLFFQKSTTEAVQGLKPYTPLQLAGRDIY
VREGCYNCHSQMIRPFRAETLRYGHYSVAGEFVYDHPFQWGSKRTGPDLHRVGGKYSDEWHRIHLNNPRD
VVPESNMPAYPWLEKTQLDPAVSAPHMKALRTVGVPYTDEEIAGAAEQVKGKTEMDALVAYLQVLGRTLR
>gi|319763998|ref|YP_004127935.1| cytochrome c oxidase, cbb3-type, subunit i [Alicycliphilus denitrificans BC]
MESSQTKVAHYDDTVVRQFTIMAVVWGVVGMLVGVFIAAQLTWPELNFGIPWLSYGRLRPLHTNAVIFAF
GGCGLFATSYYVVQRTSQARLFMPKLASFTFWAWQAVIVAAAISLPLGYTSGKEYAELEWPIDILIAVTW
VSYAIVFFGTVGTRKVKHIYVANWFFGAFIIAVALLHIVNSAAIPAGWMKSYSAYAGVQDAMVQWWYGHN
AVGFYLTTGFLGMMYYFIPKQAGRPVYSYRLSIVHFWALIFTYMWAGPHHLHYTALPDWTQSVGMVFSLI
LLAPSWGGMINGMMTLSGAWHKLRDDPILRFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTVGHVHS
GALGWVGLITMGSLYYLVPRLFGKDKMHSIKAIELHFWMATIGIVLYIAAMWIAGVMQGLMWRAVNTDGT
LTYTFVESVKATYPFYAIRFFGGLLYLSGMVLMAWNVWMTAISGRAVKVAIPAVKAAHA
>gi|319763999|ref|YP_004127936.1| cytochrome oxidase maturation protein, cbb3-type [Alicycliphilus denitrificans BC]
MDILYLLIPLSVVLVLFVLAGLWWAVYRGQFENIDQEGERILRND
>gi|319764000|ref|YP_004127937.1| heavy metal translocating p-type atpase [Alicycliphilus denitrificans BC]
MSDATALLDDPQEWSAFGRLCGAATEGELPADGRWESHVVLEGMHCAACALTIEDALRQVPGVAEADVSA
ATRRARVVWSPGQVLPSQWMEAVRKAGYRAMPAMDAFVREQRQRESRRALWRWLVAGFCMMQVMMYAWPA
YQAMPGDLTAEMEQLLRWASWVISLPVVLFACGPFFSSALRDIRQRRVSMDLPVALGMLITFVVSMAGTF
DPAGPFGREVYYDSLTMFVFFLLTGRWLELRLRDRTAGALEAVMNRLPDSVERRTAEGGFARVATRRLQV
GDVVRVLPGEAFPADGHILAGSTQADEALLTGESTPVGKSPGSTVTAGSHNLRSAVEVEVDALGAQTRFG
QIVALMEAASLQKPRLAQLADRVARPFLVGVLLAALLAAVWWWPTDPGHALMVAVAVLVVTCPCALSLAT
PVAMLTTAGTLARSGVLVRNLQALEALATVDTVVFDKTGTLTHDRLTVSGTQVAPGAGLAPEQALGLAAM
LARHSLHPVSRALVAAAAETEKPSLPWTLDEVQELPGAGLQARAWQMGQQEVILRLGSAAHARVAPMEGQ
QVVLSAERAGQVAELARFALSEALRPEAASVVRQLRSAGIDVQLLSGDRSAAVQGVAARAGIDVAHGDCT
PQDKLQRLQALQAGGHCVAMVGDGLNDGPVLAGAHASFAFGKAVPLAQSRSDIVVLGDNLAPVALTLLLA
RRTLRIVRQNLWWAAGYNAVGVPLAIAGYMPAWLAGLGMALSSLLVVMNAARLARIPGGDAVAISQPAHS
TPMPVEVA
>gi|319764001|ref|YP_004127938.1| uspa domain-containing protein [Alicycliphilus denitrificans BC]
MYKRILIATDGSPLSETAVQTGLSLAGLTGASVIALKVVPRYPRSYFDGGLPVDAAEVKRIEKQWSDAAQ
ELVNKVKLRGSNEGVSVKAVVAKSDLVAEAVIAAAKKHNCDLIVMASHGRKGLKRLLLGSETQHVLTHSH
IPVLVLR
>gi|319764002|ref|YP_004127939.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MQSDNLFSALRAAFPSDLDQIAVEAASASGEPLLYTWRDLDRASARIANLLASLKLPEGSRIAVQVEKSV
EAMLLYLATLRAGYVFLPLNTAYQSAEIEYFVGNAEPAVVVCTPGNFSWVSRIAFTAGTQHVFTLGDDRT
GTLLERAAHFGDEHAPAVRKADDLAAILYTSGTTGRSKGAMLTHGNLLSNARVLKDYWGWKPGDVLIHAL
PIFHVHGLFVAIHGALINGSRMIWMAKFDPKAAIAAMQRATVFMGVPTLYVRMLAEPALTKAAVSHMRLF
ISGSAPLLIETFKEWQDRTGHTILERYGMSETIMLTSNPCTADARHGGQSERRGGTVGFALPGVGLRVVD
DAGKEVPVGEIGNIQVRGPNVFKGYWRMPEKTKEEFSTDGWFKTGDVGKVDERGYVSIVGRSKDLIISGG
YNVYPAEIEGYINEMPGVAESALVGVPHPDFGEVGVAVVIPRPGVALDGEAIIAQLKSQLANFKIPKRCF
VATELPRNTMGKVQKNLLREQYKGLFA
>gi|319764003|ref|YP_004127940.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MAGEVVAALAALEGPDRGIVRVALRSEGRLNAMSRAMWRQLCSVFESVQRSADARCVLIEGEDGAFCAGG
DISEYPAFRFDPASLRDFHENDVWGGLSAMLACDVPIVACIDGACMGAGVEIASCCDIRIAATGARFGAP
IARLGFPMAPREARLVAGAVGETTARQMLLEAATFSAAEMAQRGFLSRVVEPALLRAQALGTARRIAALA
PGAARLNKQTLRALKAQDMPKTPVHQAQTAIDTVANPDPYAYAASAEHREGIAAFLDKRPPNF
>gi|319764004|ref|YP_004127941.1| hypothetical protein Alide_3334 [Alicycliphilus denitrificans BC]
MQERDDTQRFTDMPRRRDMLRAAGAAGLAAAAGGAWAQGASTWPSKPVTLIVPFPAGGGTDAFARPLAAQ
FSKSTGKTLVIDNRGGAGGTVGASIAAKAHPDGYTLFMGGAHHVIAPSVYPRLDYDIEKDFVPLALLASV
PQVVVVNPRNVKANTIQELLAMVKSSPGKFNYASAGSGSSHHLAGELFKIQTGTFITHIPYRGAGPALQD
LIGGNVDMMFDGLGSSAGHIKGGRIKALMVAGSKRNPAFPDVPCAAEVGLPDYNVSTWYGLWTPKGTPPD
VQARIVEEIRKLGASDEIKAIWAGNGAEFGTLSPQDFGKMIGSEVKRWAQVVKASGAKIE
>gi|319764005|ref|YP_004127942.1| malonyl-CoA decarboxylase [Alicycliphilus denitrificans BC]
MNAATTWISRSVDRLRPGADKKEKEPAAERSTHERLQASLRKSGEALSPRALRRMLADLQDVVAPRVSEI
EGGRRAQAVADWYAGAEPAERRDMWLLMCEQFAPDATRFKSAQQRYEAAAGTADAPQAEAHLRRALVSPR
TRLLQRFAVFPDGMRFLVDLRAELLPLLKSDKRLLPLEAELEQLFATWFDVAFLELRRLSWDSPASLIEK
LIKYEAVHDIRSWADLKNRLDSDRRCYGFFHPRLPNEPLIFVEVALVNEISESITPLLDESAEAADIQRA
TTAIFYSISSTQTGLRGVSFGDSLIKHVAETLTEEFPRLRTFATLSPIPGFRSWLAKQGAAQLERLDEKQ
RVELGRAVGFMPPQIAHVLAAADKALELPPKSPVRQLLQQCAARYLGRELQDGKPLDAVARFHLGNGARV
ERLNWAADPSAKGMKQSFGMMVNYLYDLKRIDKHRALLEEGRVPVSGDIESLCGD
>gi|319764006|ref|YP_004127943.1| gntr domain protein [Alicycliphilus denitrificans BC]
MRSVANSLHDQAAEMLRGLIFAGELAPGTFLDEAALCERLAVSRTPLREALKVLAAEGLVRHEPRRGCFV
AEITERDVQKIFPVIALLEGRAAYEATERAAAADIAALEVLHQRLREHAEAGRITEYYEVNYAIHEAFIT
LADNHWLAQTIGGLRRILRLARHQTLHVPGRLRQSLSEHLAMFDALKRGDAAAAEASMRNHLMAQRDALN
ALARNSPSRIAP
>gi|319764007|ref|YP_004127944.1| prolipoprotein diacylglyceryl transferase [Alicycliphilus denitrificans BC]
MLMYPHIDPVALQIGPVAVHWYGLTYLAGFALFMFLGLRRLRHEPYASLAGEQAWTRKDVEDILFLGVLG
VVVGGRLGYCLFYKPGYYLTHPLEILYVWQGGMSFHGGLLGVVASMLWFAHSRRKPWLQVADFVAPCVPT
GLAAGRIGNFINGELWGRFSAPDLPWGMVFPQSGSMLPRHPSQIYQFLLEGLLLFTLLWLYARRPRRRGE
VAAAFLVGYGALRFTAEYFREPDSFLGLLSLGMSMGQWLCVPMIVAGAGLWIWARRQPAGS
>gi|319764008|ref|YP_004127945.1| bacterioferritin [Alicycliphilus denitrificans BC]
MQGHPDVIDCLKDLLRGELAARDQYFIHSRQYQHQGFVRLYERMDHEMQEETQHADAILRRILLLEGEPD
MRPNAFTPGATVPEMLRKDLDTEYGVRTHLKAAIALCETHSDYVSRDMLRAQLQDTEEDHAYWLEKQIGL
IDKMGLQNYLQSQAD
>gi|319764009|ref|YP_004127946.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MNPLHERIAASFDAQGLMRTLGARLVLVQDGEVHIEMPFSGHLTQQQGFVHAGAVTSIVDNACGYAALTR
SAPGCEVVTAEFKTNFMRPAIGERFVAVGKVQSAGRMLTVCSGEVRAFAGAGPDYKVVALMQATMVSVPA
GS
>gi|319764010|ref|YP_004127947.1| dihydroxy-acid dehydratase [Alicycliphilus denitrificans BC]
MPAYRSKTSTAGRNMAGARSLWRATGMKDEDFSKPIIAVVNSFTQFVPGHVHLKDLGQLVAREIEAAGGV
AKEFNTIAVDDGIAMGHDGMLYSLPSRDIIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPV
IFVSGGPMEAGKAKLAVPGTSTVQFKKLDLIDAMVMAADDKVSDADLAEAERNACPTCGSCSGMFTANSM
NCLTEALGLSLPGNGTVVATHADREQLFKRAGRRIVELARQYYEQGDERILPRSVGFKAFENAMTLDIAM
GGSTNTILHLLAIAQEAGIAFTMQDIDRLSRVVPQLCKVAPNTDKYHIEDVHRAGGIMAILGELERAGRL
HTDVPTVHARTLGEALAQWDITRTGDEAVKTFYMAGPGGVPSQVAFSQNARWPSLDLDRAAGCIRSYDHA
FSKEGGLAVLTGNIARDGCVVKTAGVHESILVFEGPAHVVESQDEAVEHILADQVKAGDVVVVRYEGPKG
GPGMQEMLYPTSYIKSKGLGKACALLTDGRFSGGTSGLSIGHCSPEAAAGGAIGLVRNGDRIRIDIPNRT
IDVLVSDEELARRRAEQDAKGWKPAQPRPRKVSAALKAYAKLVTSADKGAVRDLSLLD
>gi|319764011|ref|YP_004127948.1| dihydroxy-acid dehydratase [Alicycliphilus denitrificans BC]
MTDPMPLNRRSAHITQGKARAPNRSMYYGMGYAEADFDKPMVGVANGHSTITPCNSGLQRLADAAIEGIR
EAGGNPQVFGTPTISDGMAMGTEGMKYSLVSREVIADCVETCVQGQWMDGCVVIGGCDKNMPGGMMGMLR
ANVPSIYVYGGTILPGSLHGCDLNIVSVFEAVGENAAGKISDRELKDIEQHAIPGTGSCGGMYTANTMSS
AFEALGMSLPYSSTMANPHQEKADSAKESAKVLIEAIRRDLKPRDIVTRKAIENAVAVIMAVGGSTNAVL
HFLAIAHAAGVDWSIDDFERMRQKVPVFCDLKPSGRYLAVDLHRAGGIPQVMKMLLNAGLLHGDCMTITG
RTIAETLKDVPGQPRADQDVIRPIDKPLYGHGHLAILKGNLSPEGAVAKITGLKNPVITGPARVFDDEQS
ALAAILDGKIKAGDVMVLRYLGPKGGPGMPEMLAPTGALIGQGLGESVGLITDGRFSGGTWGMVVGHVAP
EAFVGGTIALVHEGDSITIDAHRLLLQLNVGDDELARRRAGWTPPAPRYTRGVQAKFAFNAASASKGAVL
DLF
>gi|319764012|ref|YP_004127949.1| hypothetical protein Alide_3342 [Alicycliphilus denitrificans BC]
MYALLLGVLLMLLKYLEIGPVANWSWWWVLSPFAVAAAWWAWADATGYTKRKAMEKMEERKKNRIDRHKE
ALGMRPRRPR
>gi|319764013|ref|YP_004127950.1| cytochrome c class i [Alicycliphilus denitrificans BC]
MKRTLITLAMALSVAAPAMADEAMAKSKNCMACHAIDKKLVGPAYKEVAKKYAGKGAEATLVQHVLKGSS
GVWGPVPMPANAQVNEAEAKQLVSWILSLK
>gi|319764014|ref|YP_004127951.1| lipoprotein releasing system, ATP-binding protein [Alicycliphilus denitrificans BC]
MNESTNGIVLQARGLAKRFTEGRLDVSVLRGVDLQVRAGETLAIVGASGSGKSTLLHLLGGLDAPTAGTV
TLQGQALGALSPGAQGRLRNAHLGFIYQFHHLLPEFSAQDNVAMPLRIRRMPYAQCIAQAVQMLQAVGLA
ERVHHRPSELSGGERQRVAIARALVTRPACVLADEPTGNLDRATADAVFQLMLRLAREQGTAFVMVTHDE
TLAARCDQVARLVSGVLE
>gi|319764015|ref|YP_004127952.1| lipoprotein releasing system, transmembrane protein, lolc/e family [Alicycliphilus denitrificans BC]
MQIPYELALGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRDRMLSVVSHIE
IFAPGGAALPDPQRTLAEARANPNVIGAAPFVAAQALLARGEDMKGVLVRGIDPAREPEVTDLAAESVQG
LQALAPGGFRVVLGSELARQLGVQAGDVVTLIAPSGQVTPAGVVPRLKQMTVAGTFNSGHYEYDSALVLM
HHEDAERIFRLEGPTGVRLKLEDLHAAPEVAQQLAHSLSGDLLIRDWTQQNKTWFAAVQLEKRMMFIILT
LIVAVAAFNLVSTLVMTVTDKRADIAILRTLGASPQSIMGVFVVQGAMVGVIGTLGGLLLGLGIAFNIDV
IVPAIERALHTTFLPQDIYLISRMPSEPQSGDIVPIAVISLVLAFIATLYPSWRASRVNPAEALRYE
>gi|319764016|ref|YP_004127953.1| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Alicycliphilus denitrificans BC]
MSPSPHLLIAYADSPAPECRQASQDLALPRLERLLGRLAPADGDRGSETDFSPPHERALARHLGLPAGPH
GTTPWAAWQQSQAPAGTQGQAWAFVSPCQWQVGMDQCVLSDPAQLRLDEAQSRALLALLAPWFEQDGITL
AYDQPTRWLARGALFADLATASLDRVLQRDVRPWLADSAAARTLHRLHSEVQMLLYTHPFNDARAAQGLS
PVNAFWVHGAGALPEPPAATAAPEMPTTLRDAALRGDWRAWSAAWKALDAGPVARLAAHVAQGGAARLTL
CGERSAVSWHTAPRGLGRRIQSLLRPQRFASVREQL
>gi|319764017|ref|YP_004127954.1| single-stranded-DNA-specific exonuclease recj [Alicycliphilus denitrificans BC]
MKIIAREIPPRAAWALEQAGVHPLLARLYAARGIRAKEELDDALARLLPPDTLKGAREAAALLADAIAQD
KRLAIVADYDCDGATACAVGVRGLKLLGARHVQYLVPDRVVDGYGLTASIARRVAQQGADVLITVDNGIA
SVEGVAEAKALGLAVLVTDHHLPGPQLPAADAIVNPNQPGCGFESKAMAGVGVMFYVLMQLRAELRARGR
FDQASQPRLEPLLPLVALGTVADVVRLDNNNRRLVAQGLKRMRAGQMQPGIRALFDAAGRKAQAATTFDF
GFALGPRINAAGRLADMTLGIECLLTDDDAHADQLARQLDAINRERRELEGGMREQALLLAESLFDEGEE
PPPAISVFDPDFHEGVVGIVASRLKDKLHRPSFVFATSGAPGREHELKGSGRSIAGFHLRDALDLVAKRH
PGVILKFGGHAMAAGCTVAAEHFAAFEQAFAQVAQEWLDAATLTRRLETDGPLAPEYCRAELVDQLHREV
WGQGFAPPTFSEEVQVLSQRLVGEARNHLSLKLLHQGRPVDAIWFGHTEQLPERALLAFRLDVNEWRGER
RVQFLVEGVQL
>gi|319764018|ref|YP_004127955.1| chemotaxis sensory transducer [Alicycliphilus denitrificans BC]
MNLNHLPVARRLWALVLGLTTSLLLLSGGLLVYMEHLDDDVLRTVQANEDSISLTLRWKGLTAVAVDQSV
NALSSADEPLAARLQQKTRESIEAINAVQKRIEATASSDEDKAQLERVAQARRQVLDILSEGSKLRAAGD
FAGALSLVDGKFAPAVARYVGEQEAYLQLQERQRDAAKEQAMAQRQRAQWLGVAIALALVALGMVLANLL
VRSITRPLARAVGLADAIAAGDLTQDVHDDRRDELGQLLRSLSAMGARLRGVVSEVRAGVESVSAASGQI
ATGNQDLSSRTEQTAANLEQTAASMEELTSTVTQAADTARQANQLAANAAQVAQQGGQVMDQVVASMQQI
TDSSRKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAEAAKEIKQLITTS
VDNVESGSAQVAQAGQSMQDIVHSVRRVSDLIGEITASSSEQRDGIGQVNQAVANLDQMTQQNAALVEEA
SAAAAAMSEQAQRLSQVVAVFNVGGSAAAAPRAAPRQPAARPVAAATQAKAKAPAAAPQPPQVAKAAPAP
QPKPAAAPARIANASARTPVAAGADDDWESF
>gi|319764019|ref|YP_004127956.1| php domain protein [Alicycliphilus denitrificans BC]
MPQSLNADLHCHSVVSDGTLTPEQLAARAHANGVQLWALTDHDEIGGQHRAAAAAHALGMDYLTGTEISV
TFANTTVHIVGLGFDADDARLAQGLAATRGGRGERAREIARQLARAGIAGTYEGALCYVENPELISRTHF
ARYLVETGVCRDMGEVFRKYLTEGKPGYVPHRWAALGHAVRWIRDAGGVAVIAHPARYRFTANEEYALFS
EFRQHGGQGVEVVTGSHTSAEYRTYAAMAQEFGLAASRGSDFHSPDESHTDIGTLPGLPAHLTPVWELLD
HRILRAPQRPVAV
>gi|319764020|ref|YP_004127957.1| sua5/ycio/yrdc/ywlc family protein [Alicycliphilus denitrificans BC]
MAQYFEIYADNPQPRLLKQAAALLSGGGILAVPTDSSYALVCRLDDRDAVDRIRRVRQINDKHHLTLLCR
DLSELASYAHVDNRQYRLLKLATPGPYTFLLDATKEVPRRVSHPQRKTIGLRVPDRKGLQMLLELHGTPL
LATTLIPAGETEPLNDPQEIRERYEKQIDGIIDAGACPLEPTTVLDLTPMSTGDDPVVVREGRGSLQALG
L
>gi|319764021|ref|YP_004127958.1| chemotaxis sensory transducer [Alicycliphilus denitrificans BC]
MLGFDRWTIGARLTLAFGSVALWVGALMAAALWGLAQPGGAGAAAVPWVWALGVLAILVAAVSWLSLRSG
IVRPLAQAILIAETVAAGDLSQEFSTELQGDFGRLLSALGTMEDTLTELVGRIKQSADAIGVSAGEIDAG
NGDLSRRTEEQVGALTQTAASMEELTATVRQNAERARSASSLAVDASNTAGRGGAVVGEVVQTMDAISAS
SRKIVDIIQVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAVAAREIKSLIQESVQQ
VQAGSGLVGQAGETMQEIVHSVGQVSGLLGEISHALGEQSEGIAHVNQAVAHMDGATQHNAALVQQATQA
AAALTERAGDLQQAVGAFKLDDETAGGMAANMPDMPLRLAA
>gi|319764022|ref|YP_004127959.1| peptidase m50 [Alicycliphilus denitrificans BC]
MKRLRTGSDTIRAVDLSNLIQTVLIYALPVLFSITVHEAAHGYTARHFGDNTAAMLGRVTLNPLKHIDPV
GTVLMPLLLYFATSGNFLFGYAKPVPVNFHHLRNPKRDMVWVALAGPASNFAQAIAWALLLVALVGMGTQ
ERFFIEMARAGIAVNLVMWAFNLFPLPPLDGGRILVGLLPWKQAHFIARVEPYGFFIVLALVVAGIVGQL
WLRPLMSLGYSAIDLLIAPFIALLR
>gi|319764023|ref|YP_004127960.1| tryptophanyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MTTTRFLTGITPSGTPHLGNYAGMMRPAIAATREPGVENFYFLADYHALIKCQEPERVHRSTLEIAASWL
AAGLDPERVTFYRQSDIPEIPELTWFLTCVTGKGLLNRAHAYKAAQDKNAEAGRESDDGVTAGLFMYPVL
MAADILLFNAHRVPVGRDQIQHIEMARDMAASFNHLYGEHFTLPEAAIEDNVATLLGLDGRKMSKSYDNT
IPLFCAPAQLRKLIGSIVTDSRAPGEPKETEGSALFQIYQAFATPEQTASMRRAYADGIAWGDAKQMLFE
CIDREIAPMRARYDDLMAHPEKVEAALRIGAERARAIARPFLQTLRAAVGLRPLSAAQPQAQGTQKAGKA
ALPAFKQYREADGKFYFKLVAADGRLLLQSTGFAAPRDAGQAIARLQKEAGALQALAPQLAPVAGVDAGE
VSAALQALADANT
>gi|319764024|ref|YP_004127961.1| response regulator receiver [Alicycliphilus denitrificans BC]
MRIAALDDDTLQLELFTRALADMGHVCHAYATGAALLKDLRRETFDLLIVDWQLPDIQGPEIVDWVRRHL
GSELPILFVTNRQEERDIVQGLACGADDFMVKPVRVGELMARIQALLRRAYPSSTREGVLEFGRYRFLPA
TRSLEMDGVPVELKAREYELALFLFQNIGRLLSRDHLREIIWGHSAEVISRSLDTHISRLRSLLDLRPSN
GYMITAVYGVGYRFETVQPIPGEAAPEGGAPSR
>gi|319764025|ref|YP_004127962.1| fecr protein [Alicycliphilus denitrificans BC]
MALAIWAATAHCGAYATTQDLEHLVRPGDTLEALSLHYLDTPRLWPQLQAHNHVADPRQLRPGSVLRIPA
QLLPAGSAQVDFVHGQASATPPAGASAAPLQPGQSLDEGARLQVAPDSFVTVRLADGTLIRVQADTDLQL
QQLRRRGRAGDAQSVLELRRGSVESSVPPSRDGARRFQVRTPKASTSVRGTRFAVTLTQDERTLAAVTAG
ALSVEPLLAAAPTAATLLDAGHGVVVAADGRVGTPRALLPAPDLSGLPTSVHDADFLTLALAPVASAVAY
QVQVARDADFTETLRSGTFGAPQVRLPALEDGSYHLSVRAVDDSGLPGKVAQRMLTIKAHPVAPLYQSPA
PGGTVSRAQGELLCTPVAGVARYRIQVAADAGFAAPLLDKTSAQQCSAPVAALAPGQYYWRAASVRELPG
GASDQGPYAPGQPFTVADNPSPPSAAALQSGGDGPGLQLRWPGKPGQSYRLQVAATDDFAAPLVDERLDT
PAWASTSLAPGAYFVRIQTRDPSGLESGFSTPRLLRVQAAVQTQSGLPVTSSDGQPLSRP
>gi|319764026|ref|YP_004127963.1| chase2 domain protein [Alicycliphilus denitrificans BC]
MKPFSEVGGRANLRREWVMLSLALLCLVTWLCASGTLRRIDHLVQDAGMRLNALPAHPDIVIVAIDDRSI
EAIGRWPWRRALHAQLIEQISAQSPRALGLDILFGEEDADYPGDDLLLARALERSGRAVLPVARRDLGSR
SAADAPLALLRRASAQLGHVQVQVDPDGVARSLYRTEGPQDALWPHFSTAMLCAAGRDLPDCRGNAAPAG
GPWARRDLQILRFAGGRQPAFTTYAYIDVLKGRLPAGALRDKYVLVGASATGLGDMFAAPMASQAERIAG
VEMIAHALNAELAQSHIRPAPRGWEMGFNLAPTVLALLAIVLLGPLAGLMSCTALFIGTLAAAALAPTLS
GWQLAAAPAMVGVTMAYPLWSWRRLSAAAYFLQLEMRELREAGLSPLPEEPPRPLLRGDVLEQRIHAVED
AARRLRRLHHFVSDSLQHLPSPTFVCDAQGHVTLANEAAQRYVQARYSLQGQAIGRLLAGLVQPHGNAPL
LPRNGEQMDAIPPQQEGRDAYGRDMLMLCKPFTQDGNTIWLVTLVDLTDMRRAQQQRDQALHFISHDIRA
PIASILTLIEMHREFPEQLPQQELLARMERYARSSLAMAQGFVQLAGAQAQTYQSAPFDLAAALEEAVDG
AWAAAQEHGVEVHTATLPDAAPCHGDRSLICRAIANVLGNAIKFSPAGSTVRCALASEGAYWVISVRDQG
PGIAPELQGNLFQPFKRLHEGSHPGVGGVGLGLALVQTVVQRHGGRVQVNSSSGVGAEFQLLLPRPHP
>gi|319764027|ref|YP_004127964.1| sugar transferase, pep-cterm system associated [Alicycliphilus denitrificans BC]
MFKIFNHYFRRRTILQVIMYSMVIVSTLIVSLALQGGMGVFNGAVISSGVIRGGVMAIGIIGVNFALGLY
DRPGKLTIGQVRARAVLSFVLSMIIAGSILLLLPLQPPYQNEQTLIALLLIVGGMLVMRLLGNEMLPSSY
TRQRVLIYGTGGRASIVGQSLLENDPSIELIGYFRGPQEKGPVIQGLNIISPGKTLTDVVREQRVNEIVV
ALSERRGGSMPLRELLDCKLQGIRVIDLATHFEQLLGQIHLEAVSAGWLIFGDGFKQGLVRSVVKRLFDI
LGSGILLLLSSPVMLVTALLIFIESGRPIFYRQERVGLNGDVFDVIKFRSMRQDAEKDGTPRWAGAGDTR
VTRVGKIIRKMRIDELPQLFCVLKGDMSLVGPRPERPYFVERLTLDIPYYALRHGIKPGLTGWAQVRYHY
GASIKDAEQKLQYDLYYVKNHSWFLDLIILFETVGVVLTGKGAQ
>gi|319764028|ref|YP_004127965.1| hypothetical protein Alide_3358 [Alicycliphilus denitrificans BC]
MFRSAGANNVAGTGAVLLGASCIAAALGAAAHHPLAPVLALSLLSAIAAWTVSRPADLWCVLPALLPVAS
FTPWSGWWLVDGSDLLVLGAMGGAYLRWGVDAWRGPAATFARTPSGMHWMYVVLPLLLLLGVWRGLDDAR
GAASWATLLAQLWSQGPYGDYDLPSNTLRVAKSLAWGLLLMPVLYRWPQGAPLRLARGMVAGLLLVCAGV
LWERGLYVGWVDFGTNYRTTAWFWEMHVGGAAIDAYLAMALPFAWWAAWSAPHGWRWYAAAALVLLSTYA
VLTTYSRGLYLAVLITGVALGALVRRYHFDVPDDTAWHRKAMVWLLAALVVETMGVWLGGAFMSDRLVRS
NVDLHQRMDHWKRGVGLLHTPGQWILGLGVGRLPAHYSTQTTEGALAGRVRWLQKADGSTEAWLFGPMRP
GVKGELALAQRVALAPGGGYKVRLRAHLDSPAWVKVQLCEQHLLYVSRCQLRTRQLSADSRTIDGWMELP
LLGPAFESNGILSAWRGGVLSIKVLQANASMRLEGVELIDPQGRQVLRNPVFARGPSHWSSVAYENFLPW
HMDNLLLELLVERGLLGLLALAAVVVWALLLLAHGIRSHKPLALIVGGSIGAALLIGAVVSIIEIPRVST
MLWLLLVVSPLVRED
>gi|319764029|ref|YP_004127966.1| hypothetical protein Alide_3359 [Alicycliphilus denitrificans BC]
MIVRERPSGLRLLLVLRGSVLQRIQRSLLLNIALATLVTAVHGNLFSLKITLTPIPFTLIGLPLAIFLGF
RNTTAYDRYWEGRKLWGELVHRTRSLSRQCLGWIEGGGPIAAARRDTDVRVRIIHRAIAFAHVLRMRLRD
QRDEALLQQWLTPTDFDAVRGASDPASMILLDIGRDLGECVRTDRIQPCLAASIDGTLSSLAAVAASCER
IKNTPIPFSYTLLLHRTAYMYCFLLPFGLVDTTGFMTPFVVGIVAYTFFGLDALGDEIEEPFGLENNDLP
LDMLCRSIEISLLESLGEKDLPAPIEVDNFRLT
>gi|319764030|ref|YP_004127967.1| seryl-tRNA synthetase [Alicycliphilus denitrificans BC]
MLDILLLRKDLASAVARLETRKKPQAFLNVEAFQALESERKTIQTRTEELQSRRNQLSKQIGQLMGKGEK
DAAEAAKAQVAAIKEELDGSAARLEQIQSELQAMLAAVPNLPHESVPVGSDEAGNVEVRRWGTPRDFGFA
VKDHVDLGAPLGLDFDMGAKLSGSRFTVMKGPIARLHRALAQFMLDVQTGEHGYTECYVPYIVNADSLRG
TGQLPKFEGDLFAAKKGGQEGEPVPDDAQLYLIPTSEVPLTNLVRGEVVPESALPIRLTAHSPCFRSEAG
SYGRDTRGMIRQHQFDKVEMVQIVHPDKSYEALEEMTRHAEAVLQKLGLPYRVVCLCTGDMGFGSAKTYD
LEVWLPAQGTYREISSVSNCEAFQARRMQARFKNAQGRNELVHTLNGSGLAVGRTLVAVLENCQQADGSI
AIPEVLRPYMGGLERLAA
>gi|319764031|ref|YP_004127968.1| cbs domain containing protein [Alicycliphilus denitrificans BC]
MFFVFGPAGQVYRGGAHQLPQVLAVSGVQRPQALSPHSRPPSPETGAPAHRPGPEPSSAPPMRQMQAAWA
YAQTGRVRPKARRPLTQVSDVMTREVFSLPAAMSIQDAWQALRLEQLSQAPVVDARGQVVGLLRRSDMAS
ADLLPDLEGIKRTFAQAHRPITDVMLSPAPTVSDDTDLRRVAKAMLETGLSGLPVTDEAGMLQGFVARSD
ILRALVADPPLDLWS
>gi|319764032|ref|YP_004127969.1| hypothetical protein Alide_3362 [Alicycliphilus denitrificans BC]
MEIAILFALILLNGVFAMSELALVSARKTRLQKLIDEGDSGAIAAAKLGEDPTRFLSTIQIGITSIGVLN
GIVGESALARPLAEWLAGLGLQAQYAGYIATGLVVVLITYFSIVVGELVPKRLGQSHPEALARIVARPIN
WLALATKPFVRLLSISTEALLRALGVRQHQGSAVTEDEIHAVLAEGTSAGVIESHEHQMVRNVFRLDDRQ
IGSLMVPRADVVFLDVQASFEENLQRIEASDHARFPVVRGGMEDILGVLSARQWLSRAVRDAAARDLSTH
PLQTALYVPETINARELLDNFRQSDMHMAFVIDEYGEVQGIVTLQDLIEAIIGEFQSLDPADSWAVQRED
GSWLLDGHIPVPELKDRLQLSKLPEEDRGRYQTLSGMVMLLTGRLPNVTDTVQWENWQFEVMDMDGKTID
KVLATRVQSEPLQLDGQGAAGD
>gi|319764033|ref|YP_004127970.1| hydroxymethylbutenyl pyrophosphate reductase [Alicycliphilus denitrificans BC]
MQKPQEIVLAEPRGFCAGVDRAIEIVERALQKFGRPIYVRHEIVHNTYVVNDLKAKGAIFIEDLAEVPPG
ATLIFSAHGVSRAVQDEAKARGFTIFDATCPLVTKVHVEVAKLAREGYEFIMIGHKGHPEVEGTMGQLDS
GIHLVEDVADVARVRPAQTERLAVVTQTTLSVDDAAEITAAVRARFPNIREPKQQDICYATQNRQDAVKL
LSPQVDLVIVVGSPTSSNSNRLRELAERMGTPAYMVDSAEELRHEWFDGIARVGLTAGASAPEVLVQAVI
ARIKELGAVSVRKMAGIEETLKFPLPKGLKLHAGTDKR
>gi|319764034|ref|YP_004127971.1| peptidylprolyl isomerase fkbp-type [Alicycliphilus denitrificans BC]
MTADAIASTPSLPTVQQGSFLTLHYRLAGPAGDVINTFDEKPATLSVGTGELSPALEQRLIGLAEGTRAT
FELAAGEAFGERNPDMQQWVARKLLSELGDPDEEYAVGDVVEFPTPDGMGQYAGVVLQVNDDGAVRFDFN
HPLAGVPVTFEVQLIGVL
>gi|319764035|ref|YP_004127972.1| DNA repair protein radc [Alicycliphilus denitrificans BC]
MPLKDLPADAQPREKLLARGPAALSDAELLAILLRTGMVGKGVLQLAQELLGAPVRDDDGRITGGGFGGM
AGLLHAGAADLARIKGLGPAKRAELVAVLELARRALAQQLREREVFDSPGAVQGYLQLHLAARAHEVFAV
LFLDGQNRLIAMEELFRGTLTQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVQPSRADEALTQTLKAAL
ALVDVRVLDHVIVAPGAALSMAEQGLV
>gi|319764036|ref|YP_004127973.1| hypothetical protein Alide_3366 [Alicycliphilus denitrificans BC]
MSLARWASIALLALAGCALPLAPPEPDALLAPHLRLIGVAELGPGTEYGGATIGGLSGIDYDQERGEYLL
ISDAGARVYTARLQYGAHGLAAPQFTGVQALRHASGQPFAPWWRPQPGMDRPDAEAVRWLPGARALLWAS
EGDFGRGFGPQLRESRADGTHLRDLPLPAGFTPTAESGPLRNGTLEGLALSPDGRTAWLAMELPWRQDGE
NATPASGGAPVRITAIDVASGRPLRQIAYQPDAVPRTRRLPGPQMNGVSEILADGPHHLLVLERAYSAGA
GFAARLYRIDTREGSDTLALDTIAPGNHQPAPKTLVADLSALGIAPDNIEGMAWGAPLRAGARGSGCVLV
FVSDDNFNPAQVTQFIATEYLPLRGGHERCGTTGPR
>gi|319764037|ref|YP_004127974.1| smr protein/muts2 [Alicycliphilus denitrificans BC]
MSAALTARSFADLQPLRRALQEAAAQEAERARLRREAERRARAERHLFRDAVGPVAPLKGLPDRHWPAPV
PPEPQPVQRALDEKRVLRESLSDAFDVSTLLDVDDQLSFRRPGMGQDVTRRLRSGQWSIQRQLDLHGLRV
DEAREALGMFIRLAHRTGLRCVRVVHGKGLGSPGKAPVLKGRVQGWLVQKKEVLAFVQARPADGGAGALV
VLLAPN
>gi|319764038|ref|YP_004127975.1| hypothetical protein Alide_3368 [Alicycliphilus denitrificans BC]
MFGKKGWLWGGAAMALGAWMLPAAAQVNRPITIIVGATPGGSTDTLARVIAQSMGTTLKRTVIVENKPGA
GGNIAAQYVAKSAPDGSTLLMSFTSHTINATLFKNLPFNPVADFTPITMVAQVPSVLVARKNAPFDDVKG
LIDYARKHPNKLTFAIGGQGSSLHLASEQFKFATQTDIVNIPYKGTGPALSDLLASDTVDLMFASTINVL
PHYKQGTLKFLGVSSLQPLPQFAGLPAIASVVPGYRSEAWFGLFGPAKLPREVTDTLYAAVRQAIDAPAY
RQRMESEAATVPTMTPAQFADFIKKDVQFWGDIVKKSGATVE
>gi|319764039|ref|YP_004127976.1| homoaconitate hydratase family protein [Alicycliphilus denitrificans BC]
MTPRTLAQKLVGRACGDPQVQPGDIVTCRVDLAMMHDSGGPRRLKPHLDSLGVRVWDPERIVVVTDHYVP
ATDEGSAQIVRIARDWVREQGIRHFYDEQGICHVVTPSHGHLRPGMFAVGGDSHSCTGGAFGAYMFGIGA
TEMLGVAVSGEIWLRVPHTIAMEWTGRLPSGVCAKDMMLYMCTRFGMDGGQYEAVEFCGDAVRALSMNER
MTLSNMATELGAQAGLIAPDATTVQWLQAAGVPGDALHDMTQWCTDEGAPLLARHRMEAGSLAPQVSAPG
SPAQAQDATAFAHERLDIAYIGACTGAKLDDLRMAAQVFRGGRKAAVGVRLMVAPASAQDQRQAADEGVL
QTLVDAGAELLPNACGACAGYGANTFARDTTAISTTARNFTGRMGAASSRVFLGSPYTVAASAITGYITD
PRELLA
>gi|319764040|ref|YP_004127977.1| 3-isopropylmalate dehydratase, small subunit [Alicycliphilus denitrificans BC]
MSTTAVPAACMPTDAPGRCWVFGDDINTDYLAPGKYMKYGIDVIAQHCLEDVEPCFAREVRAGDLIIAGR
NFGAGSSREQAVEVLRHLGVRCVVAQSFAGLFYRNGFNLGLPLLLGPAAMEAPAWGIAPGALACLDLEQA
RLQLPDTQQALQCQPIPPHLLALVTDGGLVPHLRKRIARERLHSTASNP
>gi|319764041|ref|YP_004127978.1| isocitrate lyase and phosphorylmutase [Alicycliphilus denitrificans BC]
MNLHQRIREPGIVLAAGVYDALSALLVEQSGLPAAYLSGASVAYTRFGRSDIGLLSLDDVANVTTNIRER
VDLPLIVDADTGFGNALNVMRTVRLLERAGASAIQLEDQTSPKRCGHLQGKSVISTREMCGKIRAAVDAR
RHAHTLVIARTDAVAVEGFDAALERAARYAEAGADMLFVEAVRSREQMQQVNRQLGPLCPLMANMVEGGM
TPVSSAQDLAEIGYRLVIFPGGTVRALTHALQGYLSSLQAHGTTQPWCDRMLDFDGLNAVIGTPQLLALG
QRYD
>gi|319764042|ref|YP_004127979.1| ubic transcription regulator-associated domain-containing protein [Alicycliphilus denitrificans BC]
MAPTPDSPPLFQQVAQTLRQRLRDGTYPVGIPLPGERELTREFGVARTTIRSALARLQEEGSITRLRGQG
TLPVAQPSTDEHSKIRNGLLENILRFGQRTRTALVSAQFVQATSTVAQALQVASGTRVMRVVRVRKSHRR
PLLCTEVYLPAAIAEGIHPQMLEDMPLLEAIERTGHAFAQGEQELIAVNASPEVAQLLEIATGAPLLRVN
RVVADAQGVPIQYLIGHYAPDHYQYRMRLSRTGGTTTVWITD
>gi|319764043|ref|YP_004127980.1| globin [Alicycliphilus denitrificans BC]
MWAGAGPLPTIAPMPAPDSAPPATPFEWMGGEPRIRQLVDRFYDLMDLEPGYAELRATHGSTLDDARDKL
FWFLCGWLGGPDHYQDRFGHPRLRARHMPFAIGILERDQWVTCMDQAMGETGVPEDLRARLNQSFMNTAD
WMRNR
>gi|319764044|ref|YP_004127981.1| transcriptional regulator, trar/dksa family [Alicycliphilus denitrificans BC]
MNTTALTDPQREQLRALLEQRKAELLAELGEVQRDTLAVARTAGSAEAEPPGSPRDQANSMASSMVRDAE
AARDHAELVAVRAALARLADGSYGECTDCGQGVGVARLLAQPAAARCIACQSKAEARGQH
>gi|319764045|ref|YP_004127982.1| hypothetical protein Alide_3375 [Alicycliphilus denitrificans BC]
MAIEKDDGTTLATALCEALRAAEGGPVQHLETHLSHLLLTPAHAYKLKKPLHLPFADFRTLAARRHFCAE
ELRLNQRLAPALYLDMLPVLGSARHPRLGTAQEADAAIDWVLRMRRFPAGSELDALVRAGALAPAELDAF
AERLARFHAQAPGAPTDSNWGTAARVAKAIADVLDTLAPLLDGPGRAGLAALRGWFDARQPALAGHWAAR
RAAGHVRECHGDLHLGNVVRIDGAITAFDCLEFSPALRWIDTLADTGFLTMDLHAHGRGDLAWRFLDAYL
AVSGDYAGLAVLRPYEVYRALVRAMAARLRAAQGAAVALGPDYLACAERLAAPLLSPRLLITHGLSGSGK
STVAAALLQQGAVRLRSDVERKRLHGLAPLADSAAQGLDIYTREASARTFGHLAQQARAVLQAGYPVIVD
AAFLRRGERYAFHALARELGLPFAILHCHAALGQLRERLRQRRAAGTDPSEADLAVLARQQDQAEPLAPE
EQAHTLDLATDQDWDAPALYRRWLAVQA
>gi|319764046|ref|YP_004127983.1| hypothetical protein Alide_3376 [Alicycliphilus denitrificans BC]
MQTDDTADWEPDWSQAPEGWDWLAQDEDGRWYWYRTEPIVGVGGGVWRSNSRNQQYAGQGRPNPAWDGSL
RRRPN
>gi|319764047|ref|YP_004127984.1| hypothetical protein Alide_3377 [Alicycliphilus denitrificans BC]
MASPSSSFIGLGWRTLWRDLRAGELRLLMVAVTLAVAALTSVGFFADRLRGGLERDALQLLGGDAVLASD
NPTPAPVVKQARALGLASVTTLGFPTMARAQESQGGASRLVALKSVELGYPLRGRLQVSDDAQRPGAPTQ
DIPAPGEAWVDAPLLNALSLGLGDPLLLGDTQLRVTRIITLEPDRGAGFMSFAPRVMINAQDLPATGLVQ
PASRITYRFAVAGRPDAVKRFTAWATEAVAGPGMRGVRVESLDSGRPEMRQTLDRAQKFLNLVALLAALL
SAVAVALAARGFANDHLDAAALLRVLGQSQHTIAGAYVLEFLLVGLCASAVGVLLGFAVHHVFVLLLAGL
VESALPAASLWPVALGVGVGLTLMCAFGLPPVLQLAQVPPLRVMRRDLGSVRPTSLAALGLGLAGFAALL
LVVSRDWKLGSIAVGGFAAAVLLFAALAWVAVRLLRKAVSETMAPRWLVLATRQIAARPAYAVVQVASLA
VGLLALVLLVLLRTDLIASWQRATPAHAPNRFVINIMPDQADAFRQMLRQDGVAQYDWYPMFRGRLVAIN
GRAVNLDDYPDDRAKGLVDREFNLSNAREAPGHNLIVAGRWTPGEEDAVSVEEGIAQTLGLKLGDRLRFD
IGGAASEARITSLRRVDWGSMRANFFVMYPVAHMPDVPLTYLAAYRAPERPGFDNALVHAFPNVTNVDMS
ATLAQVQGVLAQVIGAVEFLFVFTLAAGLVVLFAAVTATREERAREFAIMRAVGARASLLRQVQRAELAG
VGLLAGFLASCVAVAVGWTLARYVFDFSWTAQPWVPLAGAAAGALLALAAGWWGLREVLRRPVVQTLRSA
AQE
>gi|319764048|ref|YP_004127985.1| formate dehydrogenase subunit fdhd [Alicycliphilus denitrificans BC]
MTRTPERQTPSTAPRLPRLTRAAAPLTHAVQAVNERGEREELHIPAERPLTVYVDRRELVTLMTLGAHPE
LLVLGYLRNQRLVDSADEIESVTVDWEVNAAAVVTRRGIARIEERTARKVVTTGCGQGSVFGGLMDEMAG
IRLAPARLTQADLYGIVNAIRLQESTYKSAGSVHGCALFQGQRMLVFVEDVGRHNAIDTIAGWMWMQPDA
SAMQGGDKVFYTTGRLTSEMVIKSAQMGVPIVVSRSGMTQMGHAVASRLGLCAIGRATNRRFLCYSGAER
LVLQPELA
>gi|319764049|ref|YP_004127986.1| hypothetical protein Alide_3379 [Alicycliphilus denitrificans BC]
MISVSSSLARRCAAGLALGALACVAAAKLPPLTSQAQAKAAEAAAKAAWAGKVDAYKLCLAQDRVVAQYR
RTAQDVRPAAAMPACADPGPFSYTPPPEAPASAPKS
>gi|319764050|ref|YP_004127987.1| formate dehydrogenase, gamma subunit [Alicycliphilus denitrificans BC]
MKHLLCALLVACGGAWAQAPAEPASGAAPAAASTGLAPVAGVKGQNIFDVKPDASEEPGYAAQTNAERAK
VQPGNNAPVWRQVREGTTGYSSLPRSQAPEAGNLIQPFAQYPGSRYTTAGQAWREVRNNWIIPYGAALLG
ITVLALAIFYLSRGALGREPADGSGRRIERFTPFERAAHWCNATAFVTLALTGIVMAFGKFFLQPVLGQQ
LFGWLAFGLKNVHNFMGPLFAVSLTVIVLTFVKDNIASRADFVWLSKAGGMFSNKEVPSHRFNAGEKGMF
WWGITIPGVFVVLSGLVLDRLIPGWGLVRAEMQIAHMVHATLAVWMMALLLGHIYMGTIGMRGAFKAMKT
GYVSEAWAREHHELWADDVRSGKIPAQRSGPARAEAAAPAKSALGGTP
>gi|319764051|ref|YP_004127988.1| lipoprotein [Alicycliphilus denitrificans BC]
MMKRAWHILGAVGAMAVLAACGEKPQTGAGVQHGAPLYQGTGSQFMAPGWKAGDASSWQQELKARMQHGQ
NEYNRVR
>gi|319764052|ref|YP_004127989.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Alicycliphilus denitrificans BC]
MARMKFICDAERCIECNGCVTACKNEHEVPWGVNRRRVVTLNDGVPGEKSISVACMHCSDAPCMAVCPVN
CFYRTEEGIVLHDKDVCIGCGYCSYACPFGAPQFPAQGTFGVRGKMDKCTFCAGGPEEHGSQAEFEKYGR
NRLAEGKLPACAEMCSTKALLAGDGDVVADIFRTRVVQRGKGAEVWGWGTAYGSRQAGQPPAGAKS
>gi|319764053|ref|YP_004127990.1| molybdopterin oxidoreductase [Alicycliphilus denitrificans BC]
MLLTKKSSHAPQGVQTSSPFVHSLRRGLSQALPTMDRRAFLRRSGLGVGVGIAASQLTLVRKTQAAEGAR
PGLGTTKVEVRRTVCTHCSVGCAVDAVVENGVWVRQEPVFDSPINMGAHCAKGASLREHGHGEYRLRYPM
KLVGGKYERISWDQALDEIAARMQELRKASGPDSVYFVGSSKHSNEQSYLMRKFVSFWGSNNCDHQARIC
HSTTVAGVANTWGYGAMTNSYNDMQNSKCAFYIGSNAAEAHPVSMLHMLHAKENGCKMIVADPRFTRTAA
KADLYVRFRSGTDIPVLFGLLYHIFKNGWEDKKYINDRVYGMDKIREEVMAKWTPDKVEEASGVSEAVLA
QAAEMMAKNRPSTLVWCMGQTQHSIGNAMVRASCIVQLALGNVGVPGGGANIFRGHDNVQGATDIGPNPD
SLPGYYGLAEGSWKHFANAWGVDLDWIKSRYASPAMMAKNGITVSRWIDGVLEKNELIDQDSNLRGVFFW
GHAPNSQTRGLEMKRAMDKLDLLVVVDPYPSATAAMAAMPGKPEDLNPNRAVYLLPACTQFETSGSATAS
NRSLQWREKVIEPLWESRSDHMIMYQLAQKLGFGKELVKNYQMQKVKGMDEPVPEDILREVNRCCWTIGY
TGQSPERLKAHMRHMSAFDVKTLKCTASVVDKESGYDMKGDYFGLPWPCWGTPELKHPGTPNLYQTTRHV
MDGGGNFRANFGVERDGVNLLAEDGSHSLGADITTGYPEFDHVLLKKLGWWDDLTEAEKKAADGKNWKTD
PSGGIIRVVMKVHGCYPFGNAKARAVVWNFPDAIPLHREPIYGTRPDLAAKYPTHDDKNAFWRMPTLYKS
LQEKNVADRLYEKFPLILSSGRLVEYEGGGEETRSNPWLAELQQEAFVEINPKAAASRGIRNGDRVWLST
PTGARLNVQALVTERVGPDTCWMPFHFSGRWQGQDMLAYYPKGAHPVVRGEAVNTGTTYGYDSVTMMQET
KTTICNVERA
>gi|319764054|ref|YP_004127991.1| formate dehydrogenase region tat target [Alicycliphilus denitrificans BC]
MQNNQSPPSRRRFFAGAATVGAAAAAVATLPRMAAQELPAAARAPRATPERGGGYHESDHVRRYYDTTRI
>gi|319764055|ref|YP_004127992.1| cytoplasmic chaperone tord family protein [Alicycliphilus denitrificans BC]
MSSTTAHLTAPPTTTALDEETARAELYGLLAQLYYAPPEPGLLAALRVAVTEAPASGAFLQEPWQQLVAV
AREMVDGAVADEYDALFGGVGKPEVYLYGSHYLSGFLNEKPLVRLRADLQGLGLAAPEDMPDTEDHIACL
CEVMRYLIAGDDGGVCHLQSQRTFFAGHLQPWVQQLCDALQAQPRARFYAALARFTRAFMEVEAQGFDML
E
>gi|319764056|ref|YP_004127993.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alicycliphilus denitrificans BC]
MPKTLICDCNRTMPLDPKALGTALHEELTLHSTLCRREAGAFQQAVCSGQAVLVACTQEERLFTELAGRT
QGATSPLRFVNIRETGGWSRDASQAGPKIAALLAAAHLPEPEPVPAVAFESGGRLLIIGALDAAERAAAL
LDDVLDVTLFTQGPGEAGGGQERRHPVLGGRIVALTGWLGRFELQWLADNPIDLDLCTRCNACVAACPEG
AIGLDYQIDMAACTGHRDCVKACAVAGAIRFDREAEPQSQSFDLVLDLRPAGASPTFLQHAPPQGYLRWD
GQNLQVLLRLRELVGEFDKPKFFNYNQKLCAHSRNREVGCSACVDICSAEAIASDPARQQVVVNPHLCVG
CGACTTVCPTGAMGYAYPSAQDMGARIRTLLATYQQAGGRQPGLLLHDQEKGRQLVHELGRAAQLGVAHG
VPAHMMPVALWHTASTGLDLWLSAIAQGAAQIVLLLTGEEAPQYAEALRAQMEVAQALLRDLGYAGTHLH
CVHARSATDLDAGLRALDGQRGAVPVQAARFAPTNDKRATLELALDHLLAHAPAAALPEAIALPGGPSPW
GTVVVDKDRCTLCMSCVSACPASALQDNPQAPQLRFIERNCVQCGLCERTCPEGAIALQPRLLLTPERGQ
PRLLHETRPYGCIRCGRPFGTLQAVEAMLGRLAGHPMFQGEALERLKMCGDCRVIDLYSAQNEVKVTDL
>gi|319764057|ref|YP_004127994.1| hypothetical protein Alide_3387 [Alicycliphilus denitrificans BC]
MAEGFLDRWSRRKQQATAGSPAVAPPAEAAGGDDVPPPAEAAPAPEPVAPVPAPTLQDVQALTHESDFSA
FVARGVAPEVRNAAMKKLFGDPRFNVMDGLDVYVEDYTRPDPLPLAALRQLASAKVLGLVEEDPRGHTGA
ADAVAQSGVCKAIPSQQVLAAAPPQGAHGAGPVSQAADAQDPDMRLQPDHAPGPQGPGDGAA
>gi|319764058|ref|YP_004127995.1| hypothetical protein Alide_3388 [Alicycliphilus denitrificans BC]
MSPRPRISVAVVMRRELLNNRWQPWRWSPAEVVPHEEPFGSAPRLLHQDEAEQRWLFPAFDVELFRDDAE
GYYLNLSAPQPCWFVHWRMDDEPGPDGEQLARPVDVSLSYHDAGRWLDAQENVDQLPVSAAVRQWLQAFV
EAHYQPEPRRRRRPQSFRSLTDRFGNPASVSTGKSRGGGAQGEGGHG
>gi|319764059|ref|YP_004127996.1| formate dehydrogenase, alpha subunit [Alicycliphilus denitrificans BC]
MSAIPFELDGRPVQAEPGETIWQAARRHGVQIPHLCHTDGLRPDGNCRACVVEIAGERTLAPSCCRAPTP
GMQVQARSPRARKSQQMVLELLLSDMPDSGYKWNDASENVAESTFQAGATGQFGSESVGQHGELSAWGHA
LGVAVRPALAALRRVQPAPDPSHPAMAVQLDACIQCTRCVRACREVQVNDVIGYALRGADAKIAFDLDDP
MGESTCVGCGECVQACPTGALSPKTHVGSQKVDRKVDSVCPFCGVGCLVTYNVRGEKIISVEGRDGPANR
GRLCVKGRFGFDYAHHPQRLTVPLVRRPGAAKDWQGQARPDDWREVFREASWDEALQLAADGLRRLRDGH
GPKALAGFGSAKGSNEEAYLFQKLVRTGFGSNNVDHCTRLCHASSVAALLEGVGSGAVSNPVRDVEHAEL
ILVIGSNPTANHPVAATWMKNAAKRGAKIVLADPRVTDIGRHAWRVLQFRPDTDVAMLNALIHTVIEEGL
ADQDFIRERALNYEALRENVRAYSPEAMEPVCGVPAATLREVARAFARARGAMILWGMGVSQHVHGTDNA
RCLIALSAITGQIGKPGTGLHPLRGQNNVQGASDAGLIPMMFPNYQRVDNAEAHAWFERFWGMPLDDRPG
YTVVEIMHKALVGDDDPHKVRGMYIMGENPAMSDPDLNHARQALASLSHLVVQDIFLTETAWLADVVLPA
SAWPEKTGSVSNTDRMVQLGRRALAPPGDARPDLWIIQQIARRMGLDWAYEGEESGVAAVYEEMRQAMAG
AIAGIGWERLARESSVTYPCLSADDPGQPIVFGERFPTPTGRVTLVPADIIPADERPDADYPLVLITGRQ
LEHWHTGSMTRRSAVLDAIEPHATASLHGDELARLGLAPGDWASVRSRRGAVRVRVRRDDGTPRGAVFMP
FAYVEAAANLLTNAALDPFGKIPEFKYCAVAVRGIDAGAPATA
>gi|319764060|ref|YP_004127997.1| respiratory-chain NADH dehydrogenase domain 51 kda subunit [Alicycliphilus denitrificans BC]
MTSRNDPAAVPVATADDLRERIRRKAHLKGRQPEPQALADVQALIGPRPPEGHARDLLIEHLHLINDRHG
ALHERHLVALARLMNLPMAEVYEVASFYHHFEILRDGEQPARLVLRVCDSLSCQLAGAGELLARLPGRLR
ALGHGDVRVQAVPCVGRCEQAPVAVVHQCPVPHATAERVLAQVDLMPERAPALHPQSPAAMVFDAVPESA
ITRGGEGVAPAWVGLAAYRARGGYRLAADVAQGRVPRDTVLAAMEDSGLRGLGGAGFPAGRKWRIVREQP
APRLMAVNIDEGEPGTFKDRTYLERDPHRFLEGLLVAALVVGTEACYVYLRDEYHGCRAILQQALAELRA
DPPCALPAIVLRRGAGAYICGEESAMIESIEGRRGEPRMRPPYIAQVGLFGRPTLEHNFETLYWVRDIVQ
HGPQWFAGFGRHGRRGLRSFSVSGRVKEPGVKLAPAGITLRELVDEYCGGMAEGHELYAYLPGGASGGIL
PARLADVPLDFDTLQPHGCFIGSAAVIVLGRNDRARDAALNVMRFFAHESCGQCTPCRVGTDKAARLMQA
PVWDGDTLDDLALVMADASICGLGQAAPNPIRCMHKYFAHEVGEGPWPGDLPPPRGGVRTERIPPATPGE
ATP
>gi|319764061|ref|YP_004127998.1| hpch/hpai aldolase [Alicycliphilus denitrificans BC]
MIDRSFLFVPGDRPERFDKALSVQAHAVILDLEDAVAPQRKTEARSAVATWLRAAQARVYVRINPLGTPW
HEEDCSVLASPAVRGVMLPKAESAADVARVAAQLGEGQDCIPLVETVAGWFEAPALARVPRVRRLAFGSF
DFMSDSGIRGDGPQLDTVRSQLVLVSRHAGLLPPVDGVSLAIDDATQLEADARRSLLWGFGGKLCIHPRQ
VPVVHAAFAPTEAEVAWARRVVDALAAGPLGAIAVDGKLVDKPVAQLAQAILQEAAAG
>gi|319764062|ref|YP_004127999.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MRGQWTALTVTLAIQAMVAMAVLTLPVMAPAVAQALGASAAYTGVYVAIVYAGAMAASLAGGTAVARWGA
IRVSQAGLVLCAAGLALCAVPSLAAMALGAFLIGLGYGPITPASSHLLARTTPAHRMSLVFSIKQTGVPL
GGVLAGAIVPGVAVAAGWQGALLLAAAANLACALIAQPLRPALDEDRDPRRPLVLGSLAQPIRVVLSHPA
LRMLAGCSFVFSMAQLSLTTYLVTYLHVTLAYTLIEAGLALSVAQTGGMVGRVLWGWIADRWSGARRVLC
ALAVLMALSAIATAVLQPGTHYLLVLAVLVVFGASAIGWNGVYLAEVARQAPPGLASVATGGTLAITFFG
VVLGPPAFGAMVGLFGTYRASFALLAVPTLLCVIVLLQGARGHAVAMRAP
>gi|319764063|ref|YP_004128000.1| regulatory protein gntr hth [Alicycliphilus denitrificans BC]
MTLDAGSNPHPSPNPALQGSQPRYVQLAQTLLNEIESGHYPVGSQLPTEFELCEQFGVSRSTAREAVKRL
VQLGLVVRQPRVGTTVRARTATTGYRQSMADVSDLYQYATETTLVIESRATVQIDAEQAQSLEATAGETW
LNLHGRRHARTPSGEPAAPICVTELWLHPAFRSIQGIQGALQGAVHAAIEQQFGELITEVEQEIRAVALN
KADAEVLGAPAGSPGLWVRRRYRNRMGQLVELATSIHPADRFSYTTVLRREWGVGGKGDAA
>gi|319764064|ref|YP_004128001.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MSAVQSSLHGAEAQGVAAPPLAGVRIIAVEQYGAGPFGTQHLADLGAEVIKIENPHDGGDVGRAVGPHYF
GPGDSHFYQSFNRNKKSITLDLKTAQGQEVLRALAADADVVFNNLRGDLPAKLGLTYDRLRDVNPRIVCG
HLSAYGRTGSRAAWPGYDYLMQAEAGYLSLTGEPDGPPARMGLSIIDLMTGTTAAMGLLAGVISARASGQ
GRDIDVSLFDVALHNLAYVATWYLNAGKAIGREARSSHPSLTPSQLYRTQDGWIFLMCNKEKFWGVLAEC
IGRPEWAQAPHYKTFKDRLAHRDRLTAELDAVLQTATTAQWMERFAGKVPAAPVYDVQQALDSGFVAEQE
RVLAFDHPGGPVRMVASPVRAGAHPVRSAPAMGADTEAVLRQAGYDEQAILRLREHAVI
>gi|319764065|ref|YP_004128002.1| isovaleryl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
MTTSTPPIAHDPEQEGLILDMLDRFLAVEVKPHVHRLEHDDVYPADIVEKMREMGLFGCLIAPEYGGLGL
STTTYAKIIERMSRVWMSISGIVNSHLIMAMAVQRAGTEAQKREFLPRFATGELRGGVGLTEPDAGTDLQ
AIRTVARREGDHYVVNGSKMWITNSMYGNCLALLVKTDPKAEPRHKGMSLLIAEKGEGFIVSKKLEKLGY
KGIDTCALSFENYRVPADRLVGGVEGKGLQQVLGGLELGRINVAARGLGIAQAALEEAVAYAQVRKTFGK
PIAEHQAIQLKLGEMATRTQAARLLVYAAAEAFDRGERCDMEAGMAKYFATEAGQENALEAMRIFGGYGY
SKEYNVERLYRDAPLLLIGEGTNELQRMIIAKQLIERNPA
>gi|319764066|ref|YP_004128003.1| mmge/prpd family protein [Alicycliphilus denitrificans BC]
MTHSDPQIAAAAGAEPLMADTLSAQIAAWVHGFRLADVPHEVRTRATHLMLDALGIGLASTQWDFSRRTL
DGLRELAGPGGDVPVIGQGQNLPLRDAVIQNALQIHGLDYDDTHPAGVIHATTSVLPAVLGLATRLGASG
EALLAAYIVGMEVATRLGAAARSGFHQVGFHPTGLIGTFGCTLAAAHLLRLDVPAMVNAQGIALSVASGS
LECLEDGAWTKRLHPGWGAAAGITAAALAKQGFIGPARAYEGRFGLYASHLGAELLAKADLGMATAGLGR
VWEVMNVAIKPVPACHFTHAFADAASILSPQWGGAPIRRIVARVPPGAMKAVCEPIGKKLRPANAYDAQF
SVPYSVATGLRRGRFSLDALDESAYTDPETLAIAALVQCEPDPTADFPRYFGGEVIVELADGRTLRHREP
INRGAPGRPIANADIVAKFHENAARAVDRSHADHVRHAVLGIEGGQAAALSRLLGVKARMENA
>gi|319764067|ref|YP_004128004.1| hypothetical protein Alide_3397 [Alicycliphilus denitrificans BC]
MRLPLRALRAALAALGLSVLGSVAHAGYPDKPIRLVVGFPPGQATDMIARVVAKKLQDALGQPVVVDNKP
GAAGIIGSEIVAKSAPDGYTLLVGSSGTMAINPSLYSKLSYHPLRDFAPISLLSVVPLFLAVNPSFPAQT
AADLVKQAKAAPGKINYGSGGSGVTSHLTMELLKHAQGIDLTHVPYKGSPAAVTDLIGGQINAMIDTGPA
LLPHMRTGKLRVLAVASEKRNPAAPGVPTMAEAGLGNFVAPAWVGLSAPKGTPKEIVDALYKALSSNWRD
APDVKEQLNALGAEPALMTPDEFARYIQAEIDKWALAVKLSGAKVD
>gi|319764068|ref|YP_004128005.1| maoc domain protein dehydratase [Alicycliphilus denitrificans BC]
MQSAIEVSPQRFRASYGRYLEDFEVGHVYEHRPGRTITDNDNIQFSLMTMNAHPMHCDANYASKSEFGRL
LVNSGLSLAVVLGMTVNDVSAKAIANLGWKEIRLTAPVFGGDTLYAESEVLEVRASKSRPTQGIVTTRTR
GFNQDGVMVMEFIRMSLIPRRGHGVGD
>gi|319764069|ref|YP_004128006.1| atpase-like, para/mind [Alicycliphilus denitrificans BC]
MALTEQDLLAALASVQDPHTGKDFVGTRAVRNVRIDGGDVAFDVELGYPAKSLVPVLREQFAAAARRVAG
VLNVSVNISTKVAAHAVQRGVQLLPQVRNIIAVASGKGGVGKSTTAANLALALAAEGARVGVLDADIYGP
SQPMMLGINRRPESLDGKNMEPLENYGVQVMSIGFLVDQDEAMIWRGPMATQALEQLLRQTNWKDLDYLL
VDMPPGTGDIQLTLSQRVPMTGAVIVTTPQDIALLDARKGIKMFEKVGVPILGIVENMAVHVCSNCGHVE
HIFGADGGRKMAQEYGMDYLGALPLDMQIRLQADSGKPTVVADPDGEVALIYKKVARDMAVKIAQKSKDF
SSKFPTISISKST
>gi|319764070|ref|YP_004128007.1| c4-dicarboxylate transporter/malic acid transport protein [Alicycliphilus denitrificans BC]
MSALPAAPAPQPAAPAGQGGLRDLSPAYFGLVMATGIVSLAADMQGWPLLARALLTLNAVQYVALWGLYL
LRAWRYPRRFFGDMVDHARGAGYFTMVAATGIMASQCIVLLGDVALGFALWALAALLWVLLTYTIFTAFT
IRPDKPTLDRGISGAWLLAVVSTQALAVSSALLAARIGQPLRLELNLLALSMWLWGGMLYIWMMALIFYR
YLFFRFSPSDLSPPYWINMGAMAISTLAGSLLILNAPQAPFLVSLLPFLKGFTVFYWASGTWWIPMLVLL
GIWRHGVRRFPLRYDPLYWGAVFPLGMYAACTWQMDKAMEFGFLDALPRLFFPVALLAWLLAFAGMLRSV
ARQARGL
>gi|319764071|ref|YP_004128008.1| selenide, water dikinase [Alicycliphilus denitrificans BC]
MNASPAPNSPRLTSLSHGGGCGCKIAPGVLSQILQQGGAGAVMPPELLVGIETADDAAVYRLNDSQALVA
TTDFFMPIVDDPYEFGRIAATNALSDVYAMGGRPIMALALVAMPVSRLPLDVIGAIIRGGQDVCRAAGIP
IAGGHTIDSVEPIYGLVAMGLVHPDRVRRNAGARPGDVLVLGKPLGVGVYSAALKKEQLGDAHYREMIAS
TTLLNTPGPLLAALPGVHAITDVTGFGLAGHALEMARGAGVTVAVDWARVPLLPGVAELAAAGFVTGASG
RNWAGYGADVVLAHGLPATAQALATDPQTSGGLLVACAPGSVDEVLAVFAREGFARAAVIGGVQAGPARL
ELR
>gi|319764072|ref|YP_004128009.1| tRNA 2-selenouridine synthase [Alicycliphilus denitrificans BC]
MSHHRPIRPADRHAFDTIIDARSPAEFAEDHIPGAINCPVLDDEERAIVGTLYVQQGAFEARRVGGAFVA
ANLARHLRERFADKPQGWRPLVYCWRGGMRSGSMVQWLRLVGWDAQQLAGGYKAFRRHVMDQIEALVPQA
DLRVLVGATGSAKTRVLQQLAAQGAQVLDLEHCARHKGSLLGALPGVAQPSQKNFETQIATVLETLDLSR
PLYVEGESARIGRLSVPVPLVQRLRAAACIEIEAGPEERLSYLLRDYAYLGDDPEALAQRLGVLVELHSK
ETVQRWQAWAHTGQLAPLFEELMRLHYDPHYGRSHARNFTHWEARRRVGAPSLSPEGIAGVARAVLALR
>gi|319764073|ref|YP_004128010.1| restriction endonuclease [Alicycliphilus denitrificans BC]
MAPNSGFAILLRSPWWVSFAIAAAIVLACGALLPAHIAPFAAVGAVPIAVVGCIAAWRQWRAPGAARVQA
ALQAAGAMPWREFADSLERAWRAEGQQVQRTDGRSSDLRITKDGKTVLVAARRWKAASHGVEPLRELQAA
VQREGARAGVYVALSGTVSENARSFARDNGLVLLEGDALAALLLKAGAKDT
>gi|319764074|ref|YP_004128011.1| patatin [Alicycliphilus denitrificans BC]
MAPPAAASPHADTALVLTGGGARAAYQVGVLQAIAAVRAACGERRGPAPFAILTGTSAGAINAAALACGA
DQFDHTVRRIARVWASFHAGQIYHADWLNVMRQGARWLTLLSLGWALTRWRRTHPHSLLNNAPLAQLLTQ
LVPLQRVPHLIRTGHLRALAVTASSYNSGQHVAFFDAGDAQRPWAHSLRKSARGPITHTHLLASSAIPLV
FPAAPLSIDGHMEYFGDGSMRQTAPLAPAIHLGAQRLMVVGTSRSYEPPPPCAAGTRQPYPPLAVVAGHA
LSNIFLDALATDIEHVGHVNRILSLLTPEERSRSPLRPLELLVLVPSQSLDEVAARHVCDLPRTIRALLS
ALGVQADGRDGSDGALASYLLFERGYTRALMALGRSDTLARRSEICAFFGWHDRGNPVRLPCY
>gi|319764075|ref|YP_004128012.1| methionyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MTARKIFVTTALPYANGNFHIGHIMEYIQADTWVRAQRMQGNAVDFVGADDAHGAPIMIAAEKAGKTPQQ
FVADIAAGRKQYLDGFHIAFDNWHSTDAPENHALAQQIYLDLKANGLIETRTIEQFFDPEKNMFLPDRFI
KGECPRCHAKDQYGDNCEVCGAVYAPTELINPYSALSGAKPQLKTSEHFFFKLSDPRCVEFLKEWTQDGV
HVQPEVAAKIKEWFGTRTNPDGSTSSGLDDWDISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNLL
ARRGQDYAAYMADPALEQYHFIGKDIITFHTLFWPAMLKFSGRKTPTKICVHGFMTVNNGEKMSKSRGTG
LDPLKYLSLGMNPEWLRYYLGAKLNGRNEDIDFNPEDFMARVNADLIGKYVNIASRAAGFITKRFGGKLG
TVSEDGQALLAQLRAHKDAIVAAYEARDTARAVRETMLLCDRVNAYVDANKPWELAKKEGMEARLQDVCS
TCIEAFRILTIYLKPILPQVAADVAAFLIVPPEQFDGVDRPLGAGHQIGQYQHLMQRVEDRQLDALFALP
APAAEEAILPGGEAIAPTITIDDFAKIDLRIAKIVECKAVEGSTKLLQLTLDVGEGRTRNVFSGVASMYK
PEQLEGKLTVVVANLAPRKMKFGVSEGMVLAASHADEKAHPGIYVLEPFPGAQPGMRIH
>gi|319764076|ref|YP_004128013.1| hypothetical protein Alide_3406 [Alicycliphilus denitrificans BC]
MRRYLLPMGSCAMLLQLPGCTVVSVAGTAVSVTASAVGLAADAAIGGARIVGKGVGKAADALASDDGATA
NDASR
>gi|319764077|ref|YP_004128014.1| regulatory protein gntr hth [Alicycliphilus denitrificans BC]
MFKHAQLESVKAWLGDPAHGALPLHARVQRALRQLILEGALGGGQPLPASRALARSLGVSRDTVEAAYGQ
LHAEGFIERRVGSGSFVSPRAQRLGAQARRPAAPAGAPRLSQRGEALYRGGGVRDFLVPRPFAPGVPDTR
AFPLATWERLQRQVLKEHGARALLHSPPQGMEPLRRAIADYVNLERGARATPERVLVLTSSQQALALCAT
VLLDAGERICVEDPLYQGARRAFEAAGLACVPVPVDGGGMQVQHLDGAASPARAVYLTPSHQYPTGATLA
LERRLAVVDWAQRHQAWIIEDDYDSEFHYAGKPTACVQGLDAHERTLYIGTFSKSLFPGLRIGYLVLPPQ
LVAPMAVARTLLDGHSAPIAQLTLARFIEGGHFGAHVRAMRGLYAARRDVLARLVREHLAAWVQPRVPAG
GMQMPCVFTCDLPERAAVDAARRAGIDLQGLSALYAAEPAEAGFLMGFAAYAPQEMETAVKALAGVLRRL
>gi|319764078|ref|YP_004128015.1| benzoate transporter [Alicycliphilus denitrificans BC]
MQHAPPSPLRPRDLVHPIVAGLVSVIVNYGGTFILVFQAAQVAGLGPELTASWVWSISVGVGVTGVLLSW
MTRAPVITAWSTPAAAFLVTALATTPYAEAVGAYLLSAAAFVVLGLSGWFDRVIRWIPPGVAAGLLAGIL
LQFGIRAFGGMGVDPLLAGLLVLAYVLLRRVAARWAVVGILLLGLGFLLVQGRVDLSSLRLQLAAPVFTM
PAFSLNALLSVALPLFLITLSGQYMPGMLVLRGDGYATSASPIVAVTGLGSLLMAPFGAHAFNLAAITAA
ICTGREAHEDPSKRWVAGIAAGVCYILVGVFGVTLAAVFMALPATFITTLAGLALLGTIGTSLATALADA
KARESALITFLAAAANITLLGIGGAFWGLVVGLAAHAVLHGRLPRPALAGKGAVS
>gi|319764079|ref|YP_004128016.1| alanine racemase domain protein [Alicycliphilus denitrificans BC]
MTATRHDQHGRYPQAATLQDFQRHLATVQARIAAACQRAGRDPASVRLLPVSKTQPEARVRLAHAAGCRL
LGENKPQEAYGKWLATQDLPGLRWSVIGHLQTNKAKLVARFASEFQALDSLRVAEALERRLQAEGRALDV
FVQVNTSGEASKYGLLPREVAAFLRALPAFPALRVRGLMTLALFSSDAARVRRCFVLLRTLRDRLRQEAP
AGITLEELSMGMSGDFEIAIEEGATVVRVGQALFGARALPDGHYWPSSCEETPP
>gi|319764080|ref|YP_004128017.1| glutamine amidotransferase class-i [Alicycliphilus denitrificans BC]
MTHTAIAIRHLHFEDLGTLEPLLQSRGYTVRYVDAPTEDLHAPHLADADLLVVLGGPIGAFDEAAYPFLA
DELALIQQRLHRQQPLLGICLGAQLIARALGAPVAPMGVKEIGFAPLALTAAGRDSPLAALDGVPVLHWH
GDQFGIPPGAQCLAGTATCPHQGFALGPQVLGLQCHLEADPRAIERWLVGHACELAQAGVDPRTLRAEAR
ALQARLPAAAGTVFTRWLDGLELLLPMQ
>gi|319764081|ref|YP_004128018.1| helix-turn-helix- domain containing protein arac type [Alicycliphilus denitrificans BC]
MTLQASVSMSWVNTVLAAAERAGVPRERLLAQAGIAPAELARERWPIDHITRLWRAAVHCTQDAGFGLKA
GALVGPGSFNVVSYLLQSAPSLRGAISVVQQYQRLISDGGRFQMIAGARAGWVVYHPRQGALAFSPHQIE
AVLAAVVAFSRWVTGQAVRPLQVQFSQPRVGPLAGYREAFACPVAFEQAFSGVLLDNALLDAPLPQADAQ
LARLHHQYAAQRLAVLHEGGALAQELRAWIAAALPGRVPTRAEAAQALGLSERTLARRMRAQRLSFSALL
DAVRREAALQAVAERGRPLAEIGQALGYAEPSVFWRAFRRWTGQTPAQWRGAAVH
>gi|319764082|ref|YP_004128019.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Alicycliphilus denitrificans BC]
MAPHSSDALVIGGGLAGIVTALELLRAGRRVTLVDRDTPERFGGLALWAFGGMALVGTPLQAKMKIPDTP
ERALADWLRFGELGPGDHWPRAWARYYVEHSRAQVHDWLVQEGVKFMPAVNWVERGRHGEGNSLPRYHIV
WGTARELTRRMVAALRAADAGRLTLLHGHRVTGLDHESGRIAGAVAVNETTGEEVRLHAPVVVLAMGGIN
GGHEEARANWPKDRPRPAAMLNGAHPFADRRLHRHAAERLGARITHAGEMWNYAAGFPHPFPHFDGHGLS
AIPCKSALWLNHRGERIGPEPLVTGFDTHWLCERVAAQEKPWTWHLLNWRIAAKEFAISGAEHNQRIRDR
QFPQFVKETLLGNHRLVRQMQRQSPHFLVDDTLAGLAAKMNALTASLDVRPQVLQATADAFDANFAHGSK
LHNDDQIRRILHARQWGPDKLRTCAPAPLQQPGAGPFIAIQMQLITRKSLGGLQTDLQSRVQGGAGQPIA
GLYCVGEAAGFGGGDANGKRSLEGTFLPGCILTARAAARSITGRAA
>gi|319764083|ref|YP_004128020.1| fmn-dependent alpha-hydroxy acid dehydrogenase [Alicycliphilus denitrificans BC]
MSLHYPAAPQDWRRLAARRLPRFLFDYIDGGANDERTLAANVDDLAALRLRQRVLVDVAKVDTRATLAGQ
PCALPLALAPIGLAGMAARRGEAQAARAAHAAGVPFTLSTVGICPLAEVAAASVPPWFQLYMLRDRGAVR
ALLDDAWAAGCRTLVFTVDLPLPGMRLRDIRHGMAASGARPALLRAAQVLARPGWVWNVALRGKPLRFGN
LTAQVPGARDLNAFKAWVDAQFDPGVTWKDIEWLRGQWKGRLLLKGILDVEDARAAVAVGAEGIVVSNHG
GRQLDSVASTAAKLPAIARAVGAQAEVLVDGGVRGGVDVFKALALGARGVLVGRPWVWALAAQGEAGVRT
LLAQWQRELLLAMTLAGVPRTADIGPRHLDTDS
>gi|319764084|ref|YP_004128021.1| thiamine pyrophosphate tpp-binding domain-containing protein [Alicycliphilus denitrificans BC]
MNGAQALLQTLADAGVEVCFTNPGTSEMHFVAALDTEPRMRAVLALFEGVATGAADGYARMAGKPAATLL
HLGCGLGNGLANLHNARKGKVPVVNIVGDHATYHTRYDAQLQSDIETVARNVSPGFVRTAQSTAALGRDA
ADAIAAARGLPGQVATLILPADVSWGEGGQPCPPPPPPTPAAASDEAVQAAAQAIRAGEKTIVLLGGHAL
REGALRTAAHIAAHSGAQLLAEVFPTRMERGAGLPAVERVAYLAELAGVQLAGARHLVLVDAKSPVSFFA
YPGKASDLVPAGCTVHTLCSPAQDAAASLDKLAAALGATAEPPLAPARRPERPRGPLTAPKVCKAVGHLL
PENAIVIDEAITSGLMLGAMTAGCPRHDLLTLTGGAIGQGLPNAVGAAIACPDRPVIALIGDGTAMYTIQ
ALWTMAREKLHVVSVIFNNASYSVLNVELERVGADEAGSKAKSQLDLKGPVLNFAQLAQGMGVHAVRART
AEDFCQALEYALAQPGPHLIEALVPEALSGARRRVLPWLLRSLPGLPQPVARALKRRIAP
>gi|319764085|ref|YP_004128022.1| lipoprotein [Alicycliphilus denitrificans BC]
MNPLTRMAGALAAGALTLLSLAGCDDQRIRELEEDVSTEADVRARFGEPETIWPESDGGHTLEYNRQPAG
HRNYMITIGPGGKMTALRQVLAPHNFERVRPGMEEEAVRRLLGKPAKRTPYALKQETDWDWNWIDPPSRE
MVFTATFGPDGRVKRTGSVEKLPDGR
>gi|319764086|ref|YP_004128023.1| hypothetical protein Alide_3416 [Alicycliphilus denitrificans BC]
MSIFRRPDYQSEVTQFIEQLKTQKPELDTQQQAGRALLWDKNVDRELWQEYRAGRVKQKPYVYYSYSDKQ
A
>gi|319764087|ref|YP_004128024.1| chromosome segregation and condensation protein scpa [Alicycliphilus denitrificans BC]
MTSAVDLPPPDAAMPEVVDQVALARLYGEPLFALPQDLYIPPDALEVFLEAFEGPLDLLLYLIRKQNFNI
LDIPMVDVTRQYLGYVDEVRSRNLELAAEYLLMAAMLIEIKSRMLLPPRRQEGSAEPEDPRAELVRRLLE
YERIKLAALRLNQVPQYGRDFIRAQVAIEQSLQPRFPDVDVAELQQAWRDILKRATLVQHHRITREELSV
REYMSHVLKALQGRRFVPFEDLFQPEKGGTVLVVTFIALLELAKETLIEITQAEAFAPIYVRLAYTPV
>gi|319764088|ref|YP_004128025.1| uncharacterized peroxidase-related enzyme [Alicycliphilus denitrificans BC]
MNRVPLIDRADTTAERKALLDEIHGAFGATPNMFRAVANSPAALRSMWGSFGALGGGKLGARLGEQIAVA
VADRNACAYCLAAHTALGLKAGASAEEMAAAQAGQSGDPRTQAALRFALKVVGERAQVGSADVQALRDAG
FSDEEVVEILAHVALNLFTNYVNVALAVPVDFPAVRLRQGQTGV
>gi|319764089|ref|YP_004128026.1| helix-turn-helix- domain containing protein arac type [Alicycliphilus denitrificans BC]
MKPLDAPLAGVDRLSALLERFRVHAHLFHAGPLCGVTHFAAAPGRAFLHVLRRGQMEVTHRPRSGAPRRL
RLSEPTLLLYPRPLEHDFHNAPQEGCDFVCATLDFDGGPRHPLVQALPAFVALPVAGVAGIGQTLDLLFA
ETERVRCGQRLLASRLFEVLLLQVLRWLLDHPGAGGVQAGLLAGLAHPGLARALTQLHERPGHGWTLAAM
AQAAGMSRSAFAAEFRATLGTTPGAYLLAWRVSLAQALMRQGLQIQQISDQLGYASPAAFSRAFAQAVGA
SPRGWLKAQ
>gi|319764090|ref|YP_004128027.1| l-aspartate oxidase [Alicycliphilus denitrificans BC]
MASHDFDVLIVGSGLAGLSAALHLAPTHRVAVITKRELQEGSSRWAQGGIAAVLADDDSFAAHIEDTLVA
GAGLCDLATTRFVVENAPEAIGWLRALGVPFTLEGDDLHLTREGGHSARRIVHATDATGAAVQETLIDVV
RATPGITVFEHHTLVDLITSRKLGLAGQRCLGLYALDEASDTVVTFRAPHTVLATGGAGKVYLYTTNPDT
ATGDGIAAAWRAGCRVANMEFIQFHPTGLYHPHAKSFLISEAVRGEGGRLLLPDGTRFMPRHDARAELAP
RDVVARAIDFEMKKHGLDCVHLDISHQSPEFLRAHFPNILAYCAELGIDITREPIPVVPTAHFTCGGVLT
DLAARTDLPGLFAVGEVAYTGLHGANRLASNSLLECMVFARAAAHAAAAATPAPVPDLPHWDDSRVRDAD
ESVVISHNWDELRRFMWDYVGIVRTNKRLERAAHRIALLQGEIQEFYAHFHVTRDLLELRNLVQVADLII
QSAQMRHESRGLHFSRDWPDMAAPAAPTILVPMR
>gi|319764091|ref|YP_004128028.1| 5-carboxymethyl-2-hydroxymuconate isomerase [Alicycliphilus denitrificans BC]
MPHLTVEYSSNLPGYPEAQALAELNAAVCASPEVLDEADLKTRFVRTTDSFQVGTEAVGRAFVHAQLRLL
SGRSPEAKKDLAGRVAGVLRRLTPRPQGLMVQLSVEIVDMDRPSYVKEQL
>gi|319764092|ref|YP_004128029.1| para-aminobenzoate synthase, subunit i [Alicycliphilus denitrificans BC]
MTSNVLIDFADPRESAGARLRFRAAAPRATLVARALHEVRGVLDAVEAAARAGAWVVGQLRYEAAPAFDA
ALRTHAADGPLAWFAVFDAPQPWDGGLAPGDAAVQWQDGIARPAFDAAIAHIRSAIGAGECYQVNFTAPL
TGAWRGGAPALFAALRRAQPGGYAACLDMGDECTLSVSPELFFDWRGGTLLARPMKGTAARGATPGEDAA
RAAQLRASPKERAENVMIVDLLRNDLSRIAEPHSVRVPRLFHTEALPTVWQMTSDVVARTRAGTRLADVF
GALFPCGSVTGAPKVRAMRLIAQLEPAPRGVYCGAVGVVRPDGAGGVAATFNVPIRTVALRGARAVCGIG
SGITWGSDAAAEWREWEAKRAFVERASEPFDLLETLGLHDGVLRHRAEHLARMAGAAAHFGVPWDAARVQ
ACLHALCAAHPAGPWRVRLLLDAQGRPRAEAFALQPTPEPVVLALAAQPFLHAHSEFTRHKTTRRAHYAA
FAPRQGVFDTVLYNEAGEITESTFGNVAALLDGRWITPPLASGLLPGVGRAVALREGRVAEAVLRVQDVP
RVQRWAFVNSLRGWLDARLE
>gi|319764093|ref|YP_004128030.1| quinolinate synthetase complex, a subunit [Alicycliphilus denitrificans BC]
MNTTAIKDVEYEQPTAGSDGAVCSTKHAWARVPPELSQEERARLKERIRRLLKEKNAVMVSHYYVHPDLQ
DLAEETGGIVSDSLEMARFGRDHAAQTLVVSGVKFMGETAKILSPEKTVLMPDLDATCSLDLGCPIDQFS
AFCDQHPDRTVVVYANTSAAVKARADWLVTSSCALDIVRALKDAGHKILWAPDRHLGAYIEQQTGADMVF
WNGACIVHDEFKALELELLKKEHPGAKVLVHPESPAEVVALADAVGSTSAILKAAREMDAKEFIVATDNG
MMHKLRTLNPAKTFYEAPTAGNSATCKSCAHCPWMAMNGLADVARVLETGANAIHVDPALIPRARLPIDR
MLAFTAALKSGQPAGALVPHFGAA
>gi|319764094|ref|YP_004128031.1| nicotinate-nucleotide pyrophosphorylase [Alicycliphilus denitrificans BC]
MTNLTHPPQGTAHNDDVTTLARVDVARALQEDVGAGDLTAGLIDPARRARARILAREAAVICGAPWVEAA
LRALDPGVRLTWHAAEGQRCAPDQVVLEIEGNARALLSAERTALNFLQLLSAVATKTRTYADAVAGTRAQ
IVDTRKTIPGLRLAQKYAVRTGGGVNHRIGLHDAVLIKENHIAAAGGVTAVLRAAEAVAERAKFIEIEVE
TLEQLAEALDAGAKMVLLDNMPLPTLREAVRINAGRAILEISGGVTLDGLRALAETGVDRISIGTLTKDV
KAIDFSMRLQELA
>gi|319764095|ref|YP_004128032.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Alicycliphilus denitrificans BC]
MTTAPSPSATPYGTLPPASPLPQRRPISLPRLAQMREAGEKITMLTAYDATFAAVADAAGVECILVGDSL
GMVCQGLPSTVGVSLDTMAYHTESVVRGLHRVQGTAWVVADLPFGSYHESREQALKSACRLMQAGAHMVK
LEGGGWTAPTVHFLVERGVPVCAHLGLTPQTVHALGGYRVQGKGDQAAQTLRRHALELQDAGAAMLVLEM
VPAPLARDLTQALPHCHTIGIGAGSGTAGQVLVMHDMLGVNLGKNPKFVRDFMQDAGSVKGAMEAYVQAV
KQGRFPDDQLHAWN
>gi|319764096|ref|YP_004128033.1| pantoate/beta-alanine ligase [Alicycliphilus denitrificans BC]
MITARTIPELRAALAARPGRPAFVPTMGNLHDGHIALVRQARPLGDVLVTSIFVNRLQFLPHEDFDSYPR
TWDADCARLEAAGCDIVFAPRETDLYPSPQTFKLQPDPQLADILEGHFRPGFFTGVCTVVMKLFSAVFFA
SGGGTAVFGKKDYQQLMVIRRMVEQFALPVQVVAGETERATDGLALSSRNGYLSAGERGQAVQLSEALRA
LAQAASAPGAPPLAALEQQAMQQLAQQGWAPDYLTVRQRHDLQPPQGAAAPGTLVALGAARLGGTRLIDN
LEF
>gi|319764097|ref|YP_004128034.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MDEHRLKCFVAVYEQGSVSAAATRLHMTQPPLSILLRKLEDELGVTLFDRSGHRLAPTATGELFYLRAKA
LLVNLQTMRRELREAEQGARGSVHIGCATAASLFVMPGVMEDLRSSGLDITVHVQEGETGYMLQRLRERS
LDLVISRSEYIAPELETRIIMDEPLQVALPPDHPQAGCDRVRLEDLRHDRFLLHRSPLGAGISDMVLRAC
QQAGVVPNVVYWGGETLPMLLMAQKGLGVAFAPQSFGQLAAAGLPRLVPLAGAQLRTHLNVVWPRQLVLT
PAASRIRDLILERFAP
>gi|319764098|ref|YP_004128035.1| hypothetical protein Alide_3429 [Alicycliphilus denitrificans BC]
MQRIRRQVAGLALLSCLAPVLGMGAAHAQADWPKRAIKVIVPYPAGGSADAMGRMVANKLGKAFPKVSVV
VENIPGGATVPGALATLRDPADGHTLFMASDGTLNINRWLLKDVRYDGDRDFTPVTVLNSYPHWLIINPQ
GPCKNFDDLVKAIQARPGKVSISVNTIGGAAHLALDNWRRQNGLNFEIVPYRGSPPAVTDLIGGHTDAHM
DVVGSSIAHARGGRVLPVAVLQGTPLKEFPKAVAQDPRDPKALVVQSNLSVVMRAGTPQAVLDKIYSVLQ
SGVKDEDFANTLSMLSLDPVLLEPAKAKAFLQQETQRYGVLVEKSGLEKQ
>gi|319764099|ref|YP_004128036.1| microcystin lr degradation protein mlrc-like protein [Alicycliphilus denitrificans BC]
MKFVIALMRHETNTFSPIPTVLGDFRRGTGNGPAYGEAARQACEGTKNAATAYLDMAREMGAEVDFAMYA
NAVPSGVVAREAFEHLCDAVVRSASQGCDAILLDLHGAMVADGYPDAEGELLRRLRACTPPGLPIGVALD
FHANFSSELIRNATVIAGYCTYPHVDIYETGARVARSIRARLEGRSQPVLLWRRLPMLTHMLRQTPAMQP
MKDIMDRAMQAERDGEVCNASVFGGFPLSDIPYAGLSVVIAAERGRLDAGQRLLDELCDLAWSRRADFVF
PSEPVPQAIAHAKTLEQGPVLLIDHGDNCGAGGVTDIMDVLEEVLRQGLEDVVAGPFWDPATVATLFERG
VGAEVTVDVGGKTDMPALGLKGRPLRLTGVVERLTDGEYTVTGPMFTGVRQSLGRTAVLRVGTVLVFICE
RPQEPYDTGVFTHAGVDPAQSRYVLLKSRQHFRAGFGPFARHVVLVSGPGVCSSDYDLFPFKHLSRPMYP
LDADATPAHADGWAPACA
>gi|319764100|ref|YP_004128037.1| hypothetical protein Alide_3431 [Alicycliphilus denitrificans BC]
MNELLYPAAVVLLGYVVLGITGFGSALVIVPLLAWRWPLAEVVPLVLLLDVPASLLLGGLNLRHVNFAEL
RRLLPGMVVGALAGLWLSTQLASRWPLLALGLYVAAVGAQALRTAAPRRRQLAAPWSHAAGGAIGLVEIL
FGTAGPLVVAWLSRRLPDVLALRASTPVVITASACSVLLTMGVAGRLSHADLWLRWLVLIAVAAAGVVMG
HHWARRVPPELLRKLICALLVVSGLTLVTHAIQMH
>gi|319764101|ref|YP_004128038.1| hypothetical protein Alide_3432 [Alicycliphilus denitrificans BC]
MFHSSIAKITGIALGAALVAHAAVAQDQSNTPIKIVIGFPAGGALDSMSRAMAEKLRTDLGKTVIVDNKP
GASTQIALMTVKRSPADGNTILISPAPPFVSQPLTYDKLPFDPDKDLVPVALLADTPLVATTSVNSPFSS
MREYVDWIKKNPKDTGVGMVTLGGVFHFGLLQLNQQMGLNLTPVAYKGAPPMLTDEIGGVLPVGMDTVAS
AGELVKAGKIKYLGVPGTERSRLIPGVPTFLEQGVPGFENAASWYAAFVPAGVPKSVVSKLEKTMIDIVQ
DPEFAEKMVRIGLVTTGRPGAEVARLAKTQREALRPIVEKSGFRVTQ
>gi|319764102|ref|YP_004128039.1| hypothetical protein Alide_3433 [Alicycliphilus denitrificans BC]
MPYPTLPVVLSAAAVLAACAPMSAQAPGDAGSHAMGFFVTSGNPGRGGDLGGIEGADRYCQALASGVGAG
ARIWRAYLSTVATVAGPPVNARDRIGTGPWYNAKGVLIARNVEELHGANHVSKQTALTEKGEVLSGRGDA
VNMHDILTGSLPDGRASAAAGDTTCGNWTHDGAGSALVGHHDRMGLDDSVTAKSWNSSHASRGCGMDALK
ATGGAGRLYCFAADTPAVPSGRAMGGASGY
>gi|319764103|ref|YP_004128040.1| nad-dependent glycerol-3-phosphate dehydrogenase domain protein [Alicycliphilus denitrificans BC]
MKIVVLGAGAWGTAMAMSAAAHAVGHDVTLWARDAQQAAGMQVARSNQRYLPGLAFPPSLRVQAGDARAL
ADQAELVIIGTPMAALRGMLLLLRDCAAPIAWLCKGFEADTGLMAHEVCAEVAPQLASGAFSGPSFAQEV
ARGQPSALVAASRHARVRDALVAAFHGPALRVYASEDIVGVEVGGAVKNVLAIATGLCDGLQLGLNARAA
LITRGLAEMTRLGLALGARPDTFMGLSGLGDLVLTATGDLSRNRRVGLLLAEGKSLQQAVDSLGHVAEGV
YSARTVVQRARAAGVEMPIAECVLALLDGRLRATDAVARLMEREPTVERL
>gi|319764104|ref|YP_004128041.1| protein-export protein secb [Alicycliphilus denitrificans BC]
MATEETPVFQIQRVYLKDLSLEQPNSPAILLEQEQPSVDIQLGVQATPVAEGIFEVAVTATVQTKIKDKT
VFLVEAKQAGIFEIRNVPEEQMGAIVGIACPQIIYPYLRGNVADTITRAGFPPVHLAEINFQAMYEQQQA
AAAEAGNGATQ
>gi|319764105|ref|YP_004128042.1| glutaredoxin 3 [Alicycliphilus denitrificans BC]
MQAVKMYTTAVCPYCIRAKQLLKSKGVEQIEEIRVDADPAARVHMMEITGRRTVPQIFIGDTHVGGYDDL
AALDGRGGLMPLLGA
>gi|319764106|ref|YP_004128043.1| rhodanese domain protein [Alicycliphilus denitrificans BC]
MNFILDNWYLVFLALASGVMLLMPVLKGAGAGSLSAAQAVQLINREKAIVIDVCEPEEFAAGHVGGARNI
PLGQLQERLPQVAKNKAVPLILVCAKGARASRAASIAKGLGYDRAQALAGGLSAWREANMPVEKA
>gi|319764107|ref|YP_004128044.1| phosphoglycerate mutase 1 family [Alicycliphilus denitrificans BC]
MHKLVLIRHGESTWNLENRFTGWTDVDLTETGIEQAKNAGRLLKAEGYEFDLAYTSVLKRATRTLWHCLD
EMDRTWLPVEHSWRLNERHYGALQGLNKADMAKQYGDAQVLVWRRSYDTPPPALEPTDPRCERGDIRYAG
LAPEQVPLTECLKDTVARVLPYWNEAIAPTIRSGKRVLIAAHGNSIRALVKYLDGISDQDIVGLNIPNGI
PLVYELDAELKPLRSYYLGDAEAAAKAAAAVAAQGKA
>gi|319764108|ref|YP_004128045.1| carboxyl-terminal protease [Alicycliphilus denitrificans BC]
MGHKLKIAGWISVGVVAGALTTVSLQTVARGAMAPLPLEEIQQLSAVFGLIKTDYVEPVDDKKLITDAIA
GMVSSLDPHSQYFDKKSFKEFREGTTGRFVGVGIEITQEDGLIKIVSPIEGSPADRAGLKTNDLITKIDD
TAVKGLTLNEAVKRMRGEPNTKVTLTILRKDESRSFPVTITREEIKTQSVKAKVVEPGYAWIRLSQFQER
TVDDFVRKVEEVYKQEPRLKGLVLDLRNDPGGLLDAAVAVSAAFLPENVTVVSTNGQLAESKATFKAAPE
FYQRRGSGDPLKRLPAAIKTVPLVVLVNEGSASASEIVAGALQDHKRATIMGSQTFGKGSVQTVRPLGPD
TGIKLTTARYYTPSGKSIQAKGIVPDVMLDETAEGDVYASLRMREADLEKHLTSGQGEEVKDAAREKARE
EARKRLEEESKKPIAERKLPEFGSDKDFQLAQALNQLKGRTVVASKTLTERKEEKKDN
>gi|319764109|ref|YP_004128046.1| uba/thif-type nad/fad binding protein [Alicycliphilus denitrificans BC]
MNDDQLLRYSRHILLDEIGIEGQERILAAHVLIVGAGGLGSPAALFLGSAGVGRLTLVDDDVVDLTNLQR
QIAHTTERVGQSKVESAAQAVHAINPLVSVHALRQRVDAQALDRLVAQADVVLDCTDNYRTRQAINAACV
RSARPLVAGAAIRFDGQISVYDPRRGDTPCYACLFPPDARFDEVACSTMGVFAPMVGIIGTMQAAEALKL
IAGVGRPLAGRLLMLDGRDMQWTEMRTERDPACPVCGALHAQAG
>gi|319764110|ref|YP_004128047.1| response regulator receiver [Alicycliphilus denitrificans BC]
MKLRTYIVEDNATIRENLIGTLEELAEVLAVGIAETEDEGKEWLTAHASQWDLAIVDLFLRQGSGLGVLA
ACRDRASEQKMVVLSNYATPDVRMRCAQLGVDAVFDKSNEIDALVDYCIVHGTQRAAAAGAPVNRSACS
>gi|319764111|ref|YP_004128048.1| response regulator receiver [Alicycliphilus denitrificans BC]
MIKIGIVDDHAIVRSGLRQFFSEHVDLRVVGEAANGREAIDLVRAQEIDVLVMDLSMPGQSGLDALAMLR
AKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECDPKEIVEAIRAIALGRRYLTPAVAELLAQQLNRK
GDAPPHEQLSEREFQVFLKLARGETAGDIAKSLSLSVKTVSTYRTRLMEKMGLSSNSDLTYYALKNRLID
>gi|319764112|ref|YP_004128049.1| chase3 domain protein [Alicycliphilus denitrificans BC]
MIWSRLRKMAISLPAALLAVVLLVGINETGYMRSHDAVGDLARSHATRTALDRLLQNMLNAETGLRGYLL
TGDDRYLQPYNEAVATINSNLDELRQTYQRLPQDQADFAQLSQQIARKLSELDLSLNLRRQNNDDAWKFV
LSTDVGKDNMDAIRAIAARLVERSAQQAQGSTQEILHSLMLSRIGIATVAVIGLLAFYMYLRQTNALQEA
NEREQEVLARERDRLEQLVRERTASLSALANHLQQVREDERAHLARELHDELGALLTAAKLDVARLKSRI
DMQVPEHAERIQHLTETLNNGIALKRRIIENLRPSSLSNLGLTASLEILTRDFAQSSNVQVEISLEEAHL
SDTAQLTVYRLVQESLTNIGKYANARKVLVCVHNHTNHVSVQVRDDGAGFDTTRIRADAHGLLGMRHRVE
AAGGSLTVSSTPGEGTLVSAVLPHRIA
>gi|319764113|ref|YP_004128050.1| hypothetical protein Alide_3444 [Alicycliphilus denitrificans BC]
MLHYAVVFLVIALVAAVFGFGGIAAGAVGIAKVLFFVFVIMAVVSFIIGLLKKN
>gi|319764114|ref|YP_004128051.1| hypothetical protein Alide_3445 [Alicycliphilus denitrificans BC]
MTVQTTTKKALETAHQAADDILDGASDTVQSARDMANRSLDKADSRIHHLRQDMDPRIDDIAAKAQDLAS
RGIAYCANTSDRARRQLRQAADTTTRYVSEKPGTSLLIAAAAGAAFATAVMLARRSGERH
>gi|319764115|ref|YP_004128052.1| transport-associated protein [Alicycliphilus denitrificans BC]
MKYASAIAFALLTGATIVSTGCSVARDQQTVGSYVDDAAITTAVKAKMAEDKGVSAAAISVETLNGTVQL
SGFAKSQAEKDRAESIARTTKNVRGVRNSIVVRP
>gi|319764116|ref|YP_004128053.1| pantetheine-phosphate adenylyltransferase [Alicycliphilus denitrificans BC]
MAHVVAVYPGTFDPITLGHEDLVRRAAQLFDRVIVAVAIAHHKKTLFSLDERMDMAREALSDCPQVRVEP
FEGLVTEFTAARGGTAMVRGLRSGTDFDYEFQLAGMNRALVPQIETVFLTPSSQYQFISSTLVREIAMLG
GDVAQFVSPTVLQRLLAKVGKS
>gi|319764117|ref|YP_004128054.1| methyltransferase [Alicycliphilus denitrificans BC]
MSRAPAKAAGEVRIIGGQWKRTRLPVAHKPGLRPTPDRVRETLFNWLGQDLTGWRCLDAFAGTGALGLEA
ASRGAASVLLVESDAGLAAQLETLRQRLQAGAVRVQRGDGIAALRQCQPASMDLLLIDPPFAGELFFPAL
QAAARAVAQDGFIYLEAPAAWTDEQLVPLGLALHRHLKAGAVHAHLLRPQQNATDM
>gi|319764118|ref|YP_004128055.1| peptidase m16 domain protein [Alicycliphilus denitrificans BC]
MNKIIKTIAARALLASVGAIFYMNNAWALLPIQHWTEPSGARVWLVESPAIPMVDVQVDFDAGARRDPAP
QAGLAAAAALMSSKGVEAGGADEPALDENDLGEAWADLGASLEAGAERDGLVFSLRSLTEPDLLERAARL
AARQLGQPSFAQNVWQRERARWTAAIKEADTRPGTVATKAFAAAVYGGHPYGQRPTAQTLANIEAADLQA
FHARYLQACRARVSIVGALTRAQAQQLVQTLLSRLPAPPSADCAPLPAVPEVQPLEKAVQEDIPFASAQA
HVLIGQPGFVRRDPDFLALLVGNHILGGGGFTSRLTNEVREKRGLSYSVGSSFSPGLNAGAFVVGLQTRP
DQAAQAVRVTRDVLKRFVEEGPTEAELRAAKDNLIGGFALRIDSNRKLLANVVNIAWNGLPLDYLEHWTD
RVQALTVADIRAAFQRKLQPARMVTVVVGGQP
>gi|319764119|ref|YP_004128056.1| peptidase m16 domain protein [Alicycliphilus denitrificans BC]
MKRAITLLGLLACLHAGAQTAPVPPATAPSAATATGAQQFTLRNGMQLIVQPDRRAPTAVHMVWVRVGSM
DEVDGTSGVAHALEHMMFKGTKKLPPGEFSRRVAALGGQENAFTSRDYTGYYQQIPASRLADVMRLEADR
FAHNQWPDAEFTREIEVVKEERRMRTEDQPRAALIEQLYASTFIASPYRRPVVGWMSDLDAMTPADVRQF
HRRWYVPRNAAVVVAGDVDPAKVLALAQKTYGAIPPRAVPARKPRTEPVQQGLRRIDFKAPAEQAYVALA
FHVPGISRIEDMGDSDRDGLALLVLSAVLSGYDGARLERALTQGADRVADAADSQASVFGRGPSLFLMTG
VPAAGKTSSQVEDALRAEIARVVREGVSEAELSRVKTQWAASTIYARDSLYSQASDLGSNWVQGLPLDAT
ERLLRLLRAVTPEQVQSVAARYFGDDQLTVTTLLPQPVAGGARRAAPAPGTGERMH
>gi|319764120|ref|YP_004128057.1| signal recognition particle-docking protein ftsy [Alicycliphilus denitrificans BC]
MFSFFKKKSPSPAEPSSAPVPDAASAPAADAPTGGGALGWLRKSFGAQDAAAPQAAPAADEAPPAVPEPA
PKPEGTRQGWMERLKSGLRKTGGSIATVFTGTQINDALYEELEDALLMADTGVKATQHLLADLRRRVKEA
KATEPAAVKALLADALADLLRPLEKPLVIGAHQPTVIMVAGVNGAGKTTSIGKLTRHLADHGESVLLAAA
DTFRAAAREQLGVWATRNTVEIISQEGGDPAAVSFDAVTAGRARGKDVVLVDTAGRLPTQLHLMEELKKI
KRVVTKADATAPHEVLLVIDGNTGQNALAQVRAFDDALSLTGLIVTKLDGTAKGGVLAAIAQERPVPVYF
IGVGEKVEDLETFDAREFAQALLA
>gi|319764121|ref|YP_004128058.1| regulatory protein lysr [Alicycliphilus denitrificans BC]
MGPGNRPLDLEWLEDFLALAECGNFSRAAEARAIAQPAFSRHIRALEEWVGVDLFDRSAHPAALTPAGQR
FLPLLEAVLANLEAARIKARAAHDQAAASLRFAATHVLSLTFFPPWLADMESQLRLGPIQTMSDSSRACE
ELMLQRRVQFVLCHGHADVPGRLDEARYPMLRLGRDVLRPVSAPHPDGTRGRALHAIGLPPPVPMLAYSE
ASGLGRIVRAQLRAFAQQPGVRTAAPGELEEVFTAHHAVLLKTMALEGRGIAWLPESLIVRELQCGALVA
AGPEAWSIPVEIRLYRQHAEMAAVAESLWQLAASRQD
>gi|319764122|ref|YP_004128059.1| dihydrodipicolinate synthetase [Alicycliphilus denitrificans BC]
MPSIANYRGIIPAISCPFTPDHRIDEPALRRLASWLAGHDGVVAVMTNGHTGEVFALTPAERAEVTRIVA
DELKGRLPVISSIVCEGLADAAEHARAAQAAGAVALDVMPPHHWLRFGFTPGHALQYFEAIHKAAPQLDL
VCHVYPAWTRASYSSQLLADLARLPYVQAFKVGQRDMNKYARDIQAIREADASKAILTCHDEYLLASMVQ
GVDGALVGFATFIPQLIIDLWNAVKAGDLKKAMQVQAVITPLKDAVYGGGEPTGEAHARMKAGMYLAGVI
GDATVRPPTEAPSAQELAALRAAVQQAGLLQR
>gi|319764123|ref|YP_004128060.1| hypothetical protein Alide_3454 [Alicycliphilus denitrificans BC]
MQRSHFLRASLGAAILALAGHAAAQTYPAKPVRMVIPFPPGGTLDAVGRMLAQKLGEQMGQPFVVENKPG
GNGVIGADIVAKAPADGYTLLFNASTFTTAPMTMKSVPYSVTRDFAPVALVAKAPLSVAINKNLPITDIR
SLIAHAKAHPGKMTFAVGSIGSAGHLSTELLKRAGQIDYLVVPYKGTAPAFQDLIGGQIDGFIDPILGSL
QYHKSGMLRVVAVTSAQRAASLPDVPTVAETIPGYEFYSWYGLWAPAKAAPEIVQRLNAEVNKALTGGMK
ERLQEQGLLLSPGSAEDFARFQRSDMERAQKIVTEGGIRVE
>gi|319764124|ref|YP_004128061.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MSNEPRPRQAVVTGSSSGIGLAIAQALLDGGWHVAGLDVAPPTLDRPGFTPLAVDLADGPALERAAAGLQ
GVDALVHAAGVLRVGPLGRLDAAAGALMWQLHVDAATRLANALVPAMADRGQGRVVFIGSRVAQGLPGRG
QYAATKAALVALARSWAVEVAPRGVTVNVVSPGATATAMLQDPARAASAPRLPPIGRLVEPAEIAALVAY
LLSPPAAAITGQELRICGGASLAQ
>gi|319764125|ref|YP_004128062.1| mandelate racemase/muconate lactonizing protein [Alicycliphilus denitrificans BC]
MRIVNILESTRPIQSDIRNAYIDFSKMTLSLVAVVTDVVRDGRPVVGYGFNSNGRYGQGALMRERFIPRV
LEADPASLLDETGENLDPHRIWARMMANEKPGGHGERSVAVGTIDMAVWDAVAKIAGKPLFQLLAERYGT
GTPNPRVFVYAAGGYYYPGKGLDGLRQEMEGYLARGYSVVKMKIGGASLAEDCERIESVLRILGPGQQLA
VDANGRFDLQTALDYGKALSQYPLFWYEEAGDPLDYELQAQLGEAYAGPLATGENLFSMQDARNLIRHGG
MRPDRDWLQFDCALSYGLVEYLRTLDMLKAHGWSPSRCIPHGGHQMSLAIAAGLGLGGNESYPDLFQPYG
GFPDGVKVDNGHVTLPPLPGIGFEGKADLIREMHALAA
>gi|319764126|ref|YP_004128063.1| cuta1 divalent ion tolerance protein [Alicycliphilus denitrificans BC]
MLCQTPAMHSTPTPSCPVAVVTTTVASAADAQRLAAGAVQARLAACVQVEAIASHYVWQGAQHEDAEWRL
VCKTLPAAAPALLVWLRAQHPYEVPQLLTHTVQAEADYAQWVAQQVDG
>gi|319764127|ref|YP_004128064.1| hypothetical protein Alide_3458 [Alicycliphilus denitrificans BC]
MNPCSNARRAFIAGAAMALACNCALGQTGAVGYPVRAITIVVPFAAGGNTDVKTRLVAKQLGEILGQPVV
IDNKPGASGNIGMELVNRAAPDGYTLGMGSFGPLAVNPWIYPKLNFNPRSFVPIILLEKSPLVLVTPADK
PYQSVKDVIAAAKARPGHLNIANAGPGGAHHLSAELFESAAGIDMLGVPFKGGGPAAQALLAGQVDLMFE
QTSAAVPSIQARKIRALGVTSAQRLQQLPDVPSFAEQGLPEVTVSNWMGYVAPKGTPPDIVARLHAAFAK
AMEHPEVKDRILAQGNEFGGGSSQDFASFIDGESAKWSRLVKARNIRMD
>gi|319764128|ref|YP_004128065.1| hypothetical protein Alide_3459 [Alicycliphilus denitrificans BC]
MKLSRRHALLAAAAIALPAWAQDYPARAITLVVPFTAGGGVDAVARLLAEKLRASLKQPVVVDNKPGASG
MLGAAAVAKAPGDGYTLLLGSAGETAINPLVYKARMQYQPQKDLAPITLVTRVPNVLVASPGFPAKNVAE
LVSYAKANPGKVGYATSGVGNPQHLNGELLASVAGIRLNHVPYKGAANQLVDVASGVVDMAFVSYAGAAP
FIKGGRVKVLAVTSARRASFAPDIPAIAETPATASYSLENWFGLFAPASTPAAIQAKLNAAAADALKDPE
LIKRLREQGGEPAPMTQQQFRDFIAQETQKYAQIVESAHITPE
>gi|319764129|ref|YP_004128066.1| aconitate hydratase domain-containing protein [Alicycliphilus denitrificans BC]
MENTENFPPRAADLDGARYLVADLRGALGERLARMPVVLRLLLENVLRTTQGQERAGAVQALADWLERGT
SEAEIAYQPGRVLMHDTTSTPALVDIAAMRDALHEAGVDPALLNPVLPVDVSVDHSLAVEAYAAAGAAQA
NMGHEIRRNAERYRFLRWASKALDKVRIHPPGTGIMHTINLEQLATVVTTERRAGALWAVPDMMLGTDSH
TPMVNGIGVLGWGVGGLEAQTVMFGMPTMLRIPEVIGVRLTGALRPGVQASDLALVVTSRLRAMGVAGEF
VEYFGSGVSTLAAGERAVIANMAPEYGATTGYFAVDGRTLDYLRATGRSEESIRLVEAYMRHQGLWFDPA
AEPRYTRVLEIDLDTVGWHIAGPRRPQDLLDYGDSARALQDAAFTPQPGSALPPHAVALAAITSCTNTSD
PALLIAAGLVARKARALGLRVPPWVKTSLAPGSPAAASYLERAGLLDDLEAVGFDIVGYGCTTCIGNSGP
LTEPIRQAQQAGQVKAVAIQSGNRNFPGRVHPDIELGFLMSPPMVIAFGLGGDAARDLRTEPVQTGADGR
PVMLADLMPTRGEVQALLAQALRPDDFARDFARASLNPAWHALQAPQGALFPWNPQSTALRRPPFASLSE
GSQLGRYQAHPLLVVGDDVTTDHISPASAIPPDSLVADFLVKRGDDRGDLNVFASRRGNWEVMLRASFHS
KTLGNLLAPGAPVAHTVHAPSGQVLPLWEVAQRYRDAGQSVVLVAGERYGTGSSRDWAAKGQRLLGIRAV
LAMSFERIHRSNLIGMGILPLRLPRDASPQALQIAPGDRVEVDAPAASLAPRCPVAVRILRRDGSVQPLA
ATAAVETQLEVDLLRRGGVIPSILQQAVAQARRGADASALP
>gi|319764130|ref|YP_004128067.1| gntr domain protein [Alicycliphilus denitrificans BC]
MKTATSISRQILALARSEQWTSGVHLAAQGLADRLRVSRQPINDALQLLAEHGIAQRERNRGFFLAVPHD
QIPDDLLPEAPASDADLVEATYFRIAEDRLRGTLPESVTEAALRTRYALSKSQLSAVLNRISHEGWIERK
QGYGWTFAAMLTTPDSLLQSYRLRLALEPAALLEPGYRLEPAVLERCRAAEIHLLQGGIATDRADRIHDR
GVNFHESLVQASGNAFFIDTIRRVNRVRRLLSYRSMQDRSRYREHCEQHLHILDLLEQERNEEASQAMRA
HLASTLRNLTNITDILQPGATAPAAPSPERAST
>gi|319764131|ref|YP_004128068.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC]
MTISTQLLSTLAPRGHIRASINTGNPILARLDGDGRPAGVSVDLARRFAQQLGLELELVVFDTAGKSVDA
VTREEADFGFFAVDPVRGAGIAFSAPYVLIEGSYLVRQDSPLTGNAQVDQAGHTVVVGKGSAYDLYLTRE
LKQAQILRAPSSPAVVETFVQSTADVAAGVRQQLEADALRIPGLRLLPGRFMVIQQAMGIPKPRGAEAQH
VLAAFVEDAKASGFVADALARHGIEGATVAPRADA
>gi|319764132|ref|YP_004128069.1| hemagglutinin-related protein [Alicycliphilus denitrificans BC]
MTRPVFAYVGSRTTRERNARGEGITVFRVDEERGTLDRIQTVAHLTNPSFLAMNARGDRLYTVHGDGHEV
SVLAVDRETGLLAFMQTQDCGGRNPVHLSIAPDGRHLVVSDHLGQQGGTVVVLPIAPDGLLGPVQQRVAL
PGEPGPHRKEQPFAKPHFNPFAPGGRFVLVPDKGLDRVFVFFFEQGRLAPAAQPWLQCREGAGPRHLAFH
PALPRAYVVNELDSTVLACSFDAATGRMEGLQVLSTLPDHFVGNSRAAEIEVSRDGRRVHASNRGADSIA
VFDVDAATGRLFWRGAFPAGGRTPRFFASSPVGNRMFVLNEDSDGIACFALDDEAPIDTRRPIASTPCGS
PVCMVFSERV
>gi|319764133|ref|YP_004128070.1| alcohol dehydrogenase groes domain protein [Alicycliphilus denitrificans BC]
MISYDVAECGQPLVRNERATPRPVGDQVLVRVEAAGVCHSDLHIWHGSYDLGNGKKMSMIDRGMKLPLTM
GHEIAGEVVAVGDAVKDVAVGKRYLVFPWHGCGECSVCRRGDENLCLAGRSMGVFQPGGYADHVLVSHSR
YLVDIGDMPPVHAAPYACSGLTTYSALKKIPAQVLKDEKLIIFGAGGLGLMAILLARAMGSAGVIVIEPD
AAKRAAALQAGALAAFDPGQDGYMAQVRQAAGGAVWAIIDCVGSSQTVQAGIDMLTKGGQLVQIGLFGGH
VDLPTPSMALRAITYQGTYVGNLRELQELMQLVKDKRLQPVPSTCLPFGKAFTALLALEEGKAVGRQILT
PEGAC
>gi|319764134|ref|YP_004128071.1| hydratase/decarboxylase [Alicycliphilus denitrificans BC]
MRALRVARGEAPRGFKIGFTNRNIWPLYKVYAPIWGMVWSTSLAFCEGEGTVDLAGCCQPRIEPEAVFGF
AATPAPQATPDELFAALDWVAPGFEIVQTHLPDWKFTAADTVADGALHARLLVGPRLPVRAVAASAAQLD
ARLAAAQVTLARDDQPVDAGCGACVLDGPLQALRYFLTELRACPGAPDIQPGDVVTTGTWTDAWPVRAGE
RWSGAFGPPLAPLTVHFR
>gi|319764135|ref|YP_004128072.1| response regulator receiver [Alicycliphilus denitrificans BC]
MRILIVEDSETLSEALNRSLRIEGYACDIAADGQAALQFLKSYRYDAIILDLMLPRVDGFGVLQALGSDA
GAAPVLVLSAREQLDDRVRALDAGADDYLTKPFELAELLARLRALVRRPAQRDTPVLRHGELAVDPRSRT
ARWRGDDLKLTPKEYGCLELLLRRQGAVLSRTQIFEHLYDSSSDASDKVVEVIVSTLRTKLAQCGLGELI
VTRRGFGYVLM
>gi|319764136|ref|YP_004128073.1| histidine kinase a domain protein [Alicycliphilus denitrificans BC]
MHPPSAPSNDTAWSLHRRLAVGLILCIGGTFAAVFPVLDRLIDRAIYQQMDLTLSQRAAAVGRALQEPDP
QRLERLMPEYEPRGHTEFFTVFNEDNGQAVLRSPSSAGAVLPVGLAAQGTPRYYDVMLPDGHAGRALATH
VALHGSQNRLLVVATEREGWDRTERRVHFALLVGIALATLLATGSALLLVQRVIVVLRRTGAAAARLNAD
QRMQPLGGDLPRELKPFADAFNLGLRHLYTAIERERQFSRDVAHELRTPLAEIRTSAESALSADDPILAQ
HSLRAAVDATARMQRSVDTLLLLARLESGQHTQAPDPLDVAGLVRELMAALEGMQARRRLTVQADLPPSA
WVRGDLGVIERILSNLLRNALEYAPDGDAITCRLERGDAGWLLSIDNAAPDLREGDLEHLGHRFWRKSSE
GGTAHHAGLGLALAFALARAIDLPLRFSLQGGRLTARLGPWVALV
>gi|319764137|ref|YP_004128074.1| hypothetical protein Alide_3468 [Alicycliphilus denitrificans BC]
MKFLHRERHRTEHIGWLRAAVLGANDGIISTASLVVGVAAAQASHASIMTTAVAGLVAGAMSMAAGEYVS
VFSQADTEKADLAREHRELTENPEAEHRELTAIYTRRGIAPALASEVATQLMAHDALGAHARDELGISEA
LSAKPLQAALASAASFAVGAALPLAVVMLAPGPSLLAWTVATAIFFLALLGVLAARIGGAPVLKSASRVA
LWGTLAMAITAGVGAMFGAAP
>gi|319764138|ref|YP_004128075.1| cytochrome b561 [Alicycliphilus denitrificans BC]
MIFRNSRDRYGNFVVALHWLMLVLLAAVYASMELRGFAPKGSELRANMKSLHFLLGLSVLALVAVRLCVR
WVAGAAPAIEPPMGRWPALMARLMHAALYALMIAAPLLSWLALSTAAKPVTLFGFALPMLTSANEALAHP
LKDLHEALATAGYALIGLHAAAALLHHYVVHDNTLVRMLPRRGSR
>gi|319764139|ref|YP_004128076.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus denitrificans BC]
MIPAADGHITLGVAQLRALGVATAVADIATQLPVPGLPAQAAAPLAASAQVSAPYAGVVTRILVDEGAFV
RQGQPLARIQSRDVLVAQGELSRARSEATAAALQAQRDTVLLAEGIIPAARNEQSQARTQAAQSTLRQAT
GALAQLRPVAGGQAGEYELLAPMAGQVVRRHLMPGQSVAALEAAFVVAEAGHMDVNFTAPLRLRSAIKPG
LPVGLPDGSVAKVVAVGADADPASQSLRVRASIEGQTALAVGQQFSVSLLLPVPAGALAVPPSALLPAGK
GHVLYAASDAVGGEKGAMRLRAVAVQLLGGDESISVVVPDSKDGSTALTAGEQVVTRGTALLKSMLPLQ
>gi|319764140|ref|YP_004128077.1| heavy metal efflux pump, czca family [Alicycliphilus denitrificans BC]
MLSRLIEFSLRQRLLVLLAVLALAGAGVASFLQLPIDAYPDISPTQVKLILKAPGMTPEEVESRVIAPLE
MELLGVPRGVMLRSTAKYAIADITLDFAEGSDIYWARQQVAERYAAVAGSLPEGVGGGLAPISTPLSDVF
MFTIEGGSLSLSERRTLLDWTLRPALRTLPGVADINVLGGEAASFAVVPDRARLSAAGMSFADVVTAVSR
NNRNDGAGRLDAGENTLIVRSEGAIRSAEDVSRIVLRAATAGAPAVRVGDVAAVRMEGLTRYGAVSRDGQ
GEAVEGIVVALRGADASTLVKAIRARLDELAPSLPPGVKVVPFYDRSTLIQRAVGTVESALLEATVLVVV
LLLLFLGELRAALVVALMVPLAALGTFLLMRVAGMSANLMSLGGLAIAIGMLVDAAVVVVENAVSRLDPH
ADGAQLPRLHRVFAAAREVALPVASGILIICLTFVPLLALQGLEGKLFAPVALTIVFALGVSLLLSLTLV
PVLSSLLLEEHAHREPWVMRGALRLYRPMLDAALAHPLRATAMALAALVLGVLAYLGTGKAFMPTMDEGD
ILLQLQKPPSIGLNRSRDIDLAVQKAILEKVPEVQHSIARVGSDELGLDPMGLNETDMFMQLGDRKTWRM
DKEALGEEIRKVMAAFPGLDFGFTQPIEMRVSEMLTGSRGDVAIKLFGPDLNTLGELAVRIAASVEKVPG
ARDVLTQASDHVEYLQVKVDAQASGRAGLAVAAVQDELRAQLEGVPAGMVIEANRRTPIVVRGDAPLRGS
AERFKDLRLARSGAAGSGDIPLTSLAAITTTQGPVLVRRESGSRFALIQSMVSGRDLVGFVDEARAVVAR
DVSLPAGYRLEWGGQFENQQRAAARLGLVVPVSLALIFFVLFMTFGSTRQAVLILGNVPFALVGGMAALW
MSGQYLSVPASVGFIALLGIAVLNGLVLVTHFNHLHALGLPMDQVVREGSLRRLRPVLMTASITAFGLVP
LLLSTGPGSEIQRPLAIVVIGGLVSSTALTLVLLPVLYRRFGQTMKGGTA
>gi|319764141|ref|YP_004128078.1| hypothetical protein Alide_3472 [Alicycliphilus denitrificans BC]
MNTEMNAPHDEQGAEWIRLNLVFPPALEDAVTGTLMTDITLPGFTLLHAEGHSSDFTHASIREQVRGRID
RRVLWVVIERERVDSLLAALRQRIASNDVRWWMEPVMAMGRLV
>gi|319764142|ref|YP_004128079.1| outer membrane efflux protein [Alicycliphilus denitrificans BC]
MKFLFPCAAAALACIPWFTLAQEPAPGWLPSSAQVHAALQSQPAVRAAAERVRAAAATQHALDVGSHEFQ
ANSGFQRRYVPNEQRSYNEWELGISRTIRLPDKARLDREIGSSTRSVADLRLEDAEHQVARRLLDAWMGW
LRSSAVAEETAAQDQLLSRERDVLVRRVALGDAARREMDVLDAELATQAAQTLMARDAALAARQALALGF
PEITVPLAAAALPEPQELPDSPQAWQARIVQESAEIAMANGETTRLLKVAERTRAERTPDPTVGVRVLSD
RGGTERVVGLVLSVPFGMDYRSARAATESANAAAAEAEAADVRRAIEQGAWLAVQAAQSKRAQWQSHQQA
LAAQTASNTRTRRAWELGEASLGEYLLSLRSLRQARLAETQARVDALQAAMLVRIDAHAMWHRSRSTVAN
>gi|319764143|ref|YP_004128080.1| hypothetical protein Alide_3474 [Alicycliphilus denitrificans BC]
MNIAEACRGRTSVTACWLGSRARRRVSAARVWRLNRATTRGGGACDEDGGEPQCSRAWGRASPNFGRTPR
QRSSTLGFTAPIFLLIGAAYAHDLGMTIFPGETERLLGSMGLTQTPGWETDEGLQRHLRQEHSKRGGEYI
RENADALRVPTSLTGALDMMMRAHNMAIPELEEAREPYAAQERELDVRQLAAIVCTGDALEYSDTRVMEG
VLDRIGRLIIRRQELLASACRTPLQRLATGRTELARMRDLEACALATEYQ
>gi|319764144|ref|YP_004128081.1| RNA polymerase sigma factor rpoh [Alicycliphilus denitrificans BC]
MAFQSASATTALAPANPWALVPPLGNLDAYISAVNRLPLLTLEEEQRYAQQFKKDNDLEAAGRLVLSHLR
LVVSISRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPDQGVRLVSYAMHWIKAEIHEYILKNWRMVKVATT
KAQRKLFFNLRSMKQGFKADAIDADTHRETLSDHEIDMVAEQLNVKREEVIEMETRLAGGDVLLDPAPSD
DGEQAFGPIAYLADTAHEPTAMIESRQRDALATDGITSALASLDARSRRIVEQRWLQVNDDGSGGMTLHE
LAAEYGVSAERIRQIEVAAMKKMKKALVEHA
>gi|319764145|ref|YP_004128082.1| hypothetical protein Alide_3476 [Alicycliphilus denitrificans BC]
MFRHSPARRGLLALALASACGAAVADKSAAPATPGWPARPLRIIVGFPPGSSPDLTARTFSEPLAQALGQ
PVIVENKVGAGGNIGADAVAKAQDDHTIGLFINGNLTIAKLLNPQVPYDPARDLAPLSLIGVSPLVLAAP
VNQPGVPAGADARAFLQAARQAGDRWSYGTPGVGTVGHLGTELLKARTGIAPVHIPYPGYPQVATAMLGG
QLQMALLPPALAQAQERAGKLRLIGVTSAGRSALVPHVPSLSEAGVRDFQLEIWNAFAAPASMPAPVRAR
LSALIGETARSPEVRAKLFQQGWQAVGSSAEGLANRMRADTATMSRVIREQGIRAE
>gi|319764146|ref|YP_004128083.1| electron transport protein sco1/senc [Alicycliphilus denitrificans BC]
MGAAGIFSACTPKGPKFQGVDLTGAEYARDLPLPDHNGQLRSLKDFAGKVVVVFFGYTQCPDVCPTSMSE
LAEVKRALGADGDKLQGIFVTVDPERDTPEMLKAYMASFDPGFLALRGTPEQLAAVAKDFKIYYKRVDGQ
TPTSYTMDHSAGSYVYDTAGRLRVYHRYGSGAQSLAADVRALLDEAR
>gi|319764147|ref|YP_004128084.1| protoheme ix farnesyltransferase [Alicycliphilus denitrificans BC]
MSAAPAPAPAPAMAAAHALPSRVSQFYALTKPRVVQLIVFCAFIGMVLAVPGLPSGAQWWQMAVASAGIW
LVAGAAAAFNCLVERGIDARMKRTAWRPTARGELSNAQTLLFSALLCAAGSALLYFWVNPLTMWLTFATF
VGYAVIYTVILKPLTPQNIVIGGASGAMPPVLGWSAMTDSVGPEALILFLIIFLWTPPHFWALALYRVED
YRKSGLPMLPVTHGNEYTRLQVFLYTLILFAGCLMPFIYGMSSWIYLAAAVLLGAGFCLYGFWLWRGYSD
ALARKTFRFSLIHLSLLFAALLVDHYVL
>gi|319764148|ref|YP_004128085.1| cytochrome oxidase assembly [Alicycliphilus denitrificans BC]
MTSTQQSLYDLAPLIEVMALGAAIALGPLAWVWWRGRGGTPVRRLQALTVLTLFLTFDLVMFGAFTRLTD
SGLGCPDWPGCYGNASPVGAVAEISAAQQAMPTGPVTHGKAWVEMIHRYLATGVGVLIIVLTVGAWRQRG
RTPALSPWWPTATLVWVCLQGAFGALTVTMKLFPAIVTLHLIGGLVLLVLLCVQAVRQTQMTQGAAPVAL
QGGLRWLLGGAAVLVALQSVLGGWVSTNYAVLACTTFPQCQGSWWPDMAFAEGFQIWRALGVLQDGSHIS
FAALTAIHYVHRLAAYGVLLVLGLLVWRLARAGQLRDQARWLAGLSLLQFVTGLSNVVLDWPLVAAVLHT
GGAAALIVVLTWALAASRSMADTARAPSIPRRVSA
>gi|319764149|ref|YP_004128086.1| hypothetical protein Alide_3480 [Alicycliphilus denitrificans BC]
MSGSNLSDAYSPRTAGLGPEQGAEQPLGLTVHSLPHAGDAMAAMQRTRGKGRWQMLALLLVCAAPVIASY
FTYYVIRPEGRRSYGELIDPQRPMPAQARVHALDGTPLRLDALRGQWLLVSVAGGACDADCRNNLYLQRQ
LRESMGREKERVDWVWLVSDDAEPPADIAPALAQATVLRADGATLDAWLAPAAGHALAEHLYVVDPMGHW
MMRFPAHLDRSGAANAKRDLERLLRASSSWDLAGREQEERP
>gi|319764150|ref|YP_004128087.1| transmembrane cytochrome oxidase [Alicycliphilus denitrificans BC]
MNHPARRSFGLRFWLVTLAALATIVATGSLGRWQLSRAAQMRAMQAAIDERQAMAPLEGAGLLQAQERGG
AQVLHRSVRLRGQWLPEATVFLDNRQMQGRPGFFVLTPLRLHASQRAVLVQRGWAARDFHERTRLPDIAT
PAGEVLVEGRLAGPPARLYEFQPSGEGQGSSRIRQNLDLAAYGAETGLDLLPLTVMQTGAAGDGLRRDWA
PVDSGVGKHYGYAFQWFGLCGLVVILYVWFQFVRRLFPPNRRPRA
>gi|319764151|ref|YP_004128088.1| transmembrane protein [Alicycliphilus denitrificans BC]
MDSMKILVALAFLAIIASLGSALFFMMRGSGNDKERGQRMVRALALRVGLSIVLFLCLLLAWKLGYIQPT
GLPAGAH
>gi|319764152|ref|YP_004128089.1| cytochrome c oxidase subunit iii [Alicycliphilus denitrificans BC]
MSTTTQGTTLPYYYVPAPSSHPVLAAAGLFFVILGAALWINGYAWGKYSLGLGLVWWLFVLYQWFREAAH
ESEGGLYGRKIDISFRWSMSWFIFSEVMFFGAFFTALWWARAHSVPALGSLDNALLWPDFKAVWPSLAAG
ATASPGNIVEPFQTVGPFWLPTINTALLLSSGVTLTIAHHALREDQRGKAIGFMWTTVLLGIAFLCVQGY
EYFHLYTELNLTLHSGVFGSTFFMLTGFHGFHVFVGMLMLLFITLRLHSGHFTAERHFGFEGAAWYWHFV
DVVWLGLYVLVYWL
>gi|319764153|ref|YP_004128090.1| hypothetical protein Alide_3484 [Alicycliphilus denitrificans BC]
MAGSSKPAQEGGGSLWRAVRAVAWAMIGLRNGDEYRKDQTLLRPLQVVGIALVALFLLVLLLMGLVHWVA
>gi|319764154|ref|YP_004128091.1| cytochrome c oxidase assembly protein ctag/cox11 [Alicycliphilus denitrificans BC]
MGLRRENLRMLGKLAVVASGMFAFGYLLIPAYKAICEATGINILSLNERQVPGNGVAGAEARALAKNTQV
DTSRLITVEFDANARGPWQFKPAQRTMQVHPGEMATVLYEFQNVQDRRMSAQAIPSYAPRQAAPHFNKLE
CFCFSQYTLDPGEKKEWPVVFVIDPRLPKDVTTITLSYTFFEVGGKIPQAPESTAGAVQAPAREAGS
>gi|319764155|ref|YP_004128092.1| hypothetical protein Alide_3486 [Alicycliphilus denitrificans BC]
MTTQEQRRRNLRLGLVLAAVVVALYAGFVVFRYSLLGG
>gi|319764156|ref|YP_004128093.1| cytochrome c oxidase, subunit i [Alicycliphilus denitrificans BC]
MSAVLDNHGHAAGHAAGHADHHQPTGWRRWLFATNHKDIGTLYLLFSFTMLMVGGLLAMLIRAELFQPGL
QIVNPEMFNQFTTMHGLIMVFGAIMPAFVGFANWMIPLQIGASDMAFARMNNFSFWLLVPAGIMLSASFF
MPGGAPAGGWTLYAPLSAQMPMSLDAAIFALHIMGASSIMGAINIIVTILNMRAPGMTLMKMPIFCWSWL
ITAYLLIAVMPVFAGAITMTLTDRHFGTSFFNPAGGGDPVMYQHIFWFFGHPEVYIMILPAFGMISQIVP
TFARKRLFGYTSMVYAIAAIATLSMIVWAHHMFTTGMPVTGQLFFMYGTMLIAIPTGVKVFNWTATMWRG
SMTFETPMLWAVGFIFVFTIGGFTGVIPAVVPIDTQIQDTYYIIAHFHYVLVAGSLFAIYGAYYYWAPKW
SGVMYSETRGRIHFWWSMISFNVAFFPMHFLGLAGMPRRYADYPMQFADFNMIASIGAFFFGAAQLYFFF
AVVLPMLRGKGEKAPQRPWEAAEGLEWEVPSPAPFHTFENPPKLDATATRVVG
>gi|319764157|ref|YP_004128094.1| cytochrome c oxidase, subunit ii [Alicycliphilus denitrificans BC]
MTSISNKLASLLLAPLASLSAAAHAVQDLPGGPAVRQLNLHPPVTKIAEAQHDLHWMLLIICTVIFIGVF
GVMFYSIWHHRKSRGAKAANFHESTTIEVTWTVIPFLIVIAMAAPATKVIVAQKDTTNSDLTIKVTGYQW
KWGYDYLNGEGQGIGFLSTLDSSQRALSSAGTPEGDNYLLKVDNPLVVPVNKKVRIITTANDVIHSWMVP
SFGVKQDAIPGFVRDTWFRAEKPGDYYGQCVELCGKEHAYMPIHVKVLSQAEYTAWVAAEQKKAAAKLDD
PNKVWALPDLEARGAKVYAANCAACHQANGKGAGPIKPLDGSAIVKDADHARQIQVVLKGAANGAMPAWA
ALSDTDLAAVVTYTKNAWSNKTGQLVQPAEIVAQRGK
>gi|319764158|ref|YP_004128095.1| biotin synthesis protein bioc [Alicycliphilus denitrificans BC]
MPESLPPTIDPVAAARWHALVPDESPWLHEEVARRMQERLQWIVKAPAAWCDWDPLRGGMQGHALVGERF
AQAVSQIAETSSPQGEAAVRARLARPWWSPARWSAAAPRFGLPQDGSQQMLWSNMALHMATEPQALIARW
HRALAVDGYLMFSCLGPDTLRELHALYADLGWPAPGHAMTDMHDWGDMLVQAGFAEPIMDMERITLTFAT
PQRLLQELRGLGRNLHPRRFAALRGRNWRTQLEQALAQRLADPRHDGQLALTFEIVYGHAFKPAPRVRVE
GSSAVSLQDMRSMLKSGRTSAR
>gi|319764159|ref|YP_004128096.1| phosphoribosyltransferase [Alicycliphilus denitrificans BC]
MADTRPAGISQHWRRGLHALTGLAAGLPSQCAVCHAWPARRLCDACRAQFARPGARCSTCAAVVPDGVAQ
CGECLRHPPPLDACLAAVSYGFPWAHLLAQFKFQADPGWAAALAELMRQAPGAQTAIAQADLVLPVPLSR
ERLRQRGYNQALLLARRLGSPHMHPHLLLRTRDAEAQSHLTRAQRLRNLRGAFMLDPLLAAQASGRRVLL
VDDVMTTGATLHAAAAPLREAGARHVAAIVLARTP
>gi|319764160|ref|YP_004128097.1| tRNA/rRNA methyltransferase (spou) [Alicycliphilus denitrificans BC]
MFHIVLVEPEIPPNTGNVIRLAANTGCMLHLVEPLGFSMEDRLMRRAGLDYHEYAEVRRHSGWTALLRDM
RPDPSRMFALTTHGTRSVYDAGFLPGDWMVFGAESRGLPPELRETFPPAQRLRLPMLPGQRSLNLSNAVA
VTVYEAWRQNSFLAPAPR
>gi|319764161|ref|YP_004128098.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MTMRVFQAVADEGGFAAAARALDMAPATVTRFVADLERDVGARLLQRTTRRVSLTEVGAAYLARVRTILA
EVGEARAMAQEYTGGMGGVLRVCASPALATHILAPLVAQFRQRHPAVLLDIHVRIGDDLPIADHDITLLG
TPSDYDADLIARPFASTVGVLCASLAYQGRRGAPRTPQELSEHDCLLADHMADMRHGVVRLSHPAHGERL
TEVAVRPVCVVNHSDTLMGIALGGAGIAVLSVDLVAEHLQSGRLVRVLAPWTCGHYTLYAALPSRKFMPT
RTRAFLDFLSEHTRKRIREALGGEAGD
>gi|319764162|ref|YP_004128099.1| hypothetical protein Alide_3493 [Alicycliphilus denitrificans BC]
MNKTLIAAALALGAIAAAHADAPVQYGEGTYPANLMQTQPSTLTREAVIADLVAARANGTMPRSGEWDDM
AAAPLGGTASARTRAEVRNEAIEATQASAHSHASNFN
>gi|319764163|ref|YP_004128100.1| cobyrinic acid ac-diamide synthase [Alicycliphilus denitrificans BC]
MPVIAVASPKGGVGKSTLATNIAGYFASRGHQVVLGDADRQQSARLWLQQRPQAARPIGVWEVDADWISA
PPRQATHAVLDTPAGLGGWRLKDALKLADRIIVPLQPSLFDIFATGQYLDELAAQRKGGLARVAIVGMRV
DPRTIAAEKLRNFVDGLGLPVLGYLRNTQNYIQLAAQGQSVFDVTASRVARDLEQWQGICAWLDEA
>gi|319764164|ref|YP_004128101.1| lysine exporter protein (lyse/ygga) [Alicycliphilus denitrificans BC]
MDWHTWMAFFAASWVIAISPGSGAVLSMSHGLSYGVRKTGATILGLELGLLFILVVAGAGVGSLLIASEL
AFGIVKVLGACYLIYLGLCQWRAGSVGTLGGDLVAAPASWRRRVLTGALTNATNPKGILFMVAVLPQFMS
DARPLWSQLLVMAATLITVDLIVMNGYAAGASALRRLMQNAGAMRAQNRVFGGLLMLVGTGLFFVKRGTQ
HA
>gi|319764165|ref|YP_004128102.1| potassium efflux system protein [Alicycliphilus denitrificans BC]
MAHAPVWLTYGFTYLAAAVIAVPIARALGLGAIIGYLAAGIAIGPWGLSLVSNVQDILHFAEFGVVLMLF
LVGLELQPARLWSMRRPIFGLGSAQMLGCAALLWAAAWTFGLPWRVGLVGALGLALSSTAIALQVINERN
LMRTDGGQKAFSILLFQDVAAIPILALLPLLGVAAADAAHPHAPQDLMAEAFKIVAVVGAIVLGGRWVLR
PLLRWIARSKTPEIFTATSLFLVVGIAMLMLSVGLSMALGAFLAGVLLADSEYRRELETDIEPFKGLLLG
LFFIAVGMSIDFGVILRQPLVMLGLLLGFLIVKALVIWLLARVTAMPYQERPVFTLMLAQGGEFAFVVFQ
AGATFGAIPPETASLLIGAVALSMLISPLLLALLDRVLLKRFATLKSAPQVREISEPQSAPVIIAGFGRY
GQIVARLMLAQGVPATVLDHSVEMLEVAHTFGYRVFYGDATRANLLRMAGAEQARILVVAVDAPDQSIKI
VQLAKKHFPHLQVVARARDVTHWHSLRDLGVTHVERELFESSLRTARTVLELTGLPPQEADRLTERFRAH
NIALSERMYEHHNDREAMIAVAKQGRQQLVEQMAKERQEREAQEHSAKKAVHEPLP
>gi|319764166|ref|YP_004128103.1| ubic transcription regulator-associated domain-containing protein [Alicycliphilus denitrificans BC]
MDTAIAPLLSRKPGTALHRQLFMVLRDQIAQGIYPVGGLIPPEDALCAQFDVSRITVRRAVSDLEQLGLV
EKRPGRGTFVRAAPRPLRPQASFGLLDSLGRQARETEVTVQKVEMVSPPSVVAQQLQLPDGEVAVHAVRL
RSVHGVPVMATDAWVPRAVGQHVSEAELKKRALFEILIAEGVKFGRVIQEMTAVAADPVLANLLQVDVGA
PLVRLVRLLHDRRKRPVQYITIHFTGERSRILMDVAADAVNTTGAGQIVHDPDL
>gi|319764167|ref|YP_004128104.1| isocitrate lyase and phosphorylmutase [Alicycliphilus denitrificans BC]
MTPARTLRDLLARPEITVAPGAYDGMTAKMVEAAGFPCVYMTGAGASAARGFPDYGLLGMSEMADAAGVL
ARSVAIPLVADADTGYGNELNVTRTVREYEMRGVAGLHIEDQVAPKRCGHLDGKEVIPCEQFVAKIRAAL
HARRDPDFLVIARTDARAMLGLDEAVRRARAALAAGADMVFVEAAQSLEELASIPRLVQGPCLLNIVRGG
KTPDLGLAQAQDMGYRLAILPSLLIGAAASACEQALSALKATGQPPASAGTPGVAERFRRLGAAEWDALR
TRFQTAQ
>gi|319764168|ref|YP_004128105.1| 3-isopropylmalate dehydratase, large subunit [Alicycliphilus denitrificans BC]
MDTPHPRTLFDKVWDAHVVQSLADGWDLLHIDRHLLHDLSGTAGLRQLAERGLPVRNPGLAFATPDHAVS
SAPDRTGETFAGGARLYQGLKLLTRQAGIRMFDLGEPGQGIVHVMGPELGIVQPGMTLVCGDSHTCTNGA
LGAIAFGVGSSEVTHVLASQTLVLRRPRTMRVLLDGLPGPGVGAKDLALALIGWLGANAGNGFAVEYAGA
AVEAMEVEQRMTLCNLSIELGARIGMVAPDVKTEAYLRGRPFAPQGDAFAQALAHWRTLPSDPGARYEQE
WHVNAAAVAPTLTWGTSPEHAMAVDTRVPDPADAASPAQRQAWQAALAYMGLKAGAPLQGTRIDRVFIGS
CTNSRLSDLREAAGLLRGRRVAPHVQAWVVPGSENVKRAAEREGLHEAFRAAGFAWREPGCSMCVAANGE
QAAPGERVVSTSNRNFVGRQGPGARTHLASPASAVAAALAGAIADPRSL
>gi|319764169|ref|YP_004128106.1| 3-isopropylmalate dehydratase, small subunit [Alicycliphilus denitrificans BC]
MQPFTILRGAAAPLPIDNVDTDLIIRIERLTSLQRHELGPWAFESLRYRGDGSENPDFVLNQAPWREAPI
LVAGRNFGCGSSREGAVWALLARGIRCVVAESFGDIFHANCFQNGVLPVRLPADALARARAACTPQAAWE
MDLRAQRILLPDGTALAFEVDPLRRTALLEGLDDIGRTLQLHENIDAWQARDRTARPWIWRPAPGATTEA
>gi|319764170|ref|YP_004128107.1| hypothetical protein Alide_3501 [Alicycliphilus denitrificans BC]
MTTTTRRSPIRVRRPGRASLALLAAASLFGAARAAPAAAWAPTRPVTLVVPYNPGGGTDATARAVASRLA
VLWKQPVLVENLGGADGLIGTRRVIEAAPDGYTLLFQVPSILLMKYQRSLKGIDPVARLTPVTAVATSPT
AIVVTATLPFKTLPDLVAYCRSKPCNAGSGENSSKVRAQKFAADYQLPNLAVVNYRGTAPIVGDLVSGNL
TMAFTGITAAIPLHKSGRLRVLVTNGRDRAHALPEVPTSMEAGWADSYSVTWYGMFAPQGTPPAVAQAIA
DAVREAGKDPHVREALATAGAEPAFTSPAAFTAMVRDDDARLGALVKRFPLED
>gi|319764171|ref|YP_004128108.1| hypothetical protein Alide_3502 [Alicycliphilus denitrificans BC]
MQTSNEQIGVPCAILRGGTSKGIYFKAADLPPPGAQRDRLLMAVLGAQDLLQIDGLGGSRLVTAKLAIVG
PPTHPQADVDYTYGIVPPGQGRVVYTSNCGNISAGVGPFAIDAGLVDARGADTPVRIHNTNTGKLLVAHV
PVADGGARVAGDFAIPGVPGTGARIFMDYRGTVGAKTGRGMPTGRAQDRITLSDGRAFDTSLCDVGNPCV
FVAAQALGLSGSELPDQIDANAPLLATLKELRARAAALLGLCGDWREADTASPALPLVVLVAPPAGYADA
QGRTVPAEAMDLRARLVFYGRCHESMAGTGAICTSACASVAGSVVQQATRPEGERVAPASLHIGHPLGAM
RVEVQGHARADEPLVFEALGFARTARRLMDGVAWVPRSVLEG
>gi|319764172|ref|YP_004128109.1| mmge/prpd family protein [Alicycliphilus denitrificans BC]
MPSASNAPSVAQRIARFATTFDASTLEPAHRDICARTLADTYAVAFAGQGEPAVHAALRYLHGGGLLHDD
GGPGRARLWGRGAWAAAETAAWFNGVAGHVLDYDDVNVAQRGHPSVVLWPALLALAQARGLDGERLHASY
VVGLEVLVKLSRAFAPEHYAAGWHSTASIGVLGATAACAYLLRLDAGQIAHALGLAVAQAAGSRENVGTQ
AKCFQAGQAGGAAVRAALLAAAGFEAGAHAIDGPHGYLRTYADGASADAWLARLGEAPLEIERSGLDIKQ
YPMCYATHRAIDAMLDLRAAHDLRLQDIARVDVLGSPGAFVPLVHPRPANGLQGKFSLPYAMAAAAEDGA
VRLASFTDTAVRRPQIQRFFDRVHWQEETGDIGARMAEVRLLLRDGRRLAQRVELLRGSAQRPLDEPQFV
AKLDDCLHWGGAQPDGQAGLRLLRHCEALPGMRAQAWAQALDALHPVQESHQGETNP
>gi|319764173|ref|YP_004128110.1| hypothetical protein Alide_3504 [Alicycliphilus denitrificans BC]
MKRLHATLLAAVALASIPMAAQAAYPDRPIRLVVGFGAGGGADNVARALADAMGRSLGQTVIVDNRPGAG
TTLAAGTVARAPADGYTLMMLTSTNTISPSMYKSLSYDAATAFSMVSTVARGPLLIAVPKDSGIRTLADL
LARARQAPGKLNYGAGGVGTTPHLAALVLQRDADVRMAHIPYKGGSETATALVGGQLDVQFGTPPAVAPI
ASRANVLAVTTARRTPLAPGVPAAAETVKGYEVTSWYGIGGPAGMPPEVVGTLSRAVHAALADERLRQQF
TLLGVEAAPSSPAQADRLYTEELARWAEVVRSEGLQSDQ
>gi|319764174|ref|YP_004128111.1| hypothetical protein Alide_3505 [Alicycliphilus denitrificans BC]
MPSLTTRRRFLQYAGTAATAALGAPLALAQGDAFPSRPIRIVVGYPPGQTVDSSARALAIALSDILGKPV
YVENKAGANGILGAQEVRQAAPDGHTLLLGTSGQLAINPAIYSKPGYDPLKDFEPVMLNGVGRLYLVVPA
ASPFNSLAALVQYAKANPGKLNYGSGGRGITANLAMELLKKAAGLDILHVPYKGSSAALTDLIGGQIDVM
MDAGGLVLPQVRQGKLKVLAVSSTARYKELPQVPTIAEQGYPGFEVASWTALVAPAGTPPQVVDLLNKAA
LKAQARPDVIKASATTGSEPSGSSPRQLREFLASENRKWAEAAQAAGVAPE
>gi|319764175|ref|YP_004128112.1| amidohydrolase [Alicycliphilus denitrificans BC]
MPAPHPRFEELAQDLPEITAIRHQIHRHPELAFEETATADLVARKLREWGFEVATGVGTTGVVGTLKAGS
GSRRIGLRADMDALAIEERTGLPYASTVPGKMHACGHDGHTSILLGAARYLARTRRFSGTLHLYFQPAEE
RGYDSGAERMLADGLFERFPCDAVFGLHNHPGAEVGSIMARKGASQPATDKVSIRVIGKGGHVARPHLTV
DPSVVTASIVMALQTIVSRNVDATQTAVLSVCTLQSGGFYGVIPDEARVELSVRCFDPGVRDLLRERIEA
TVHGQAQSYGARAEIDYQTGYPALVNTDREVDFAVEVARELLGPERVDPDFGLVTAGDDFSFMLQRRPGC
YLRLGNGLFNEPCHPVHHPRYDFNDDNLRTGAAYWSLLVERYLVD
>gi|319764176|ref|YP_004128113.1| secreted protein [Alicycliphilus denitrificans BC]
MCVIVSIDLLNQYPDHILTSPVRGVQELMAAAKAKPGQINYGSTGAGVSPQVALEMLNAKAGVAMTHVPY
KGTAPMLTGMLSGDIDVAFDIASSSGPMIQGGRLRGLAVSGASRLKMLPQIPTVAESGYPGFDVTSWYGL
VAPKGTPDAVVQKLNAALQKVLLNPETQRTLAATGNDVLPGTPAQFQQFMQGEYAKWTDAVKQLNITVN
>gi|319764177|ref|YP_004128114.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MSHALSVLRVLLDDDLFVRVGYRMEPTLRARALHEPVRELLGASQKLLLSHRSFDPAVDERVFRIGLSIQ
SESMLIAELFADLALSAPRVKLLLSPTSREKAYGALDTEQIDLAIGYLPGGSNWHHRAELHDLGVVCCFH
PKLLPYQTPIGLNQYRASRHALISAKNNLHGYMEEAFNKARVDIEPVLAAPSFLTLFATVARAPLVTTVP
AIVAQHYAPMFGLATSPLPFAFPSFPVQLIWHARSHEDSAHQWLRQRIERSAAAIVSPGLFQPG
>gi|319764178|ref|YP_004128115.1| hypothetical protein Alide_3510 [Alicycliphilus denitrificans BC]
MTMKHRIARRTLLAGMAVAAAGALPLGAAAQNYPAKPVTIIVPFSAGGTTDILARIVGQGLQTELGQPFV
VDNRAGAGGNIGASLAAKAPADGYTLFMGTVGTHAINQALYKKMPFDPVKDFAPISRVATVPNLLVAHPS
QPYKTVKELIAYAKANPGKVTFGSPGSGASPHVSGELFKSMTGTDLLHVPYKGSAPAMTDLLGGQISIMF
DNMPSAIQHVRSGKLRPIAVTTARRSPELPDVPTIAEAGVPGYEAMSWFGMFAPAATPKPVLDKLNAALV
KVLNQPDVKKKIAEQGGDVVAETPAQFAAFIKAESAKWGKVVKESGATVD
>gi|319764179|ref|YP_004128116.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MTASHSRERVLITGGGAGIGAATAERCRADGYEPVVIDRSAAHVPGGIQADLSDPAETARALQQALAGGP
ITRLVNNVGIVVPAEADRQTLEQFDLAVALNLRCALQCMQALLPGMREAGFGRIVNISSRAALGKELRTA
YAATKAGLIGMTRVWALELGRHGITANAIGPGPIRTELFDRANPPGAPRTQAIVDAVPVRRVGTPEDVAH
AVSYLLDARSGFVTGQVLYVCGGMTVGVAGV
>gi|319764180|ref|YP_004128117.1| beta-ketoadipyl CoA thiolase [Alicycliphilus denitrificans BC]
MTQAFICDAIRTPFGRYGGALSGVRTDDLGAVPIKALMERNPGVDWKAVDDVLYGCANQAGEDNRNVARM
AALLAGLPIAVPGATINRLCGSGLDAVGTAARAIKAGEARLLIAGGVESMSRAPFVMPKAESAFSRSNAV
YDTTIGWRFVNKLMKQHYGVDSMPETAENVADDFQIEREAQDRMALASQQKAAAAIAAGHLAKEIVPVHI
AQKKGDPIVVSQDEHPRATTLEALAKLKGVVRPDGTVTAGNASGVNDGACALLLANEEAARQYGLTPRAR
VVGMAVAGVAPRIMGFGPAPAVRKVLALTGLTLEQMDVIELNEAFAAQGLAVLRDLGLADDDRRVNQWGG
AIALGHPLGASGARLATTAVSQLHELGGRYALCTMCIGVGQGIAVVLERV
>gi|319764181|ref|YP_004128118.1| 3-oxoacid CoA-transferase, b subunit [Alicycliphilus denitrificans BC]
MSNYQKRSKTELAARVAQDIFDGAYVNLGIGQPTLVANHLPAGREVVLHSENGILGMGPAPAPGQEDYDL
TNAGKQPVTLLPGGCYFHHADSFAMMRGGHLDICVLGAFQVSSTGDLANWSTGESGAIPAVGGAMDLAVG
AKSTWVMMDLLTKTGECKVVKECSYPLTGLACVKRIYTDLCTLECTPDGLVLIDTVPGLTHAELERIVGL
PIRQ
>gi|319764182|ref|YP_004128119.1| 3-oxoacid CoA-transferase, a subunit [Alicycliphilus denitrificans BC]
MINKIADSVAQALSGVQDGATVLIGGFGTSGNPIELIDGLIAHGARELTVVNNNAGNGDAGLAALLKSGQ
VRKIICSFPRQADSWVFDELYRSGKIELELVPQGNLAERMRAAGAGIGAFFCPTAYGTELAKGKETREIN
GRHYVLEYPIHGDVALVKAEKGDRWGNLTYRMSARNFGPVCAMAAKYTVATVHELVELGELDPEAVVTPG
IFVSRVVKVPRVATQAGGIRQ
>gi|319764183|ref|YP_004128120.1| beta-ketoadipate pathway transcriptional regulator, pcar/pcau/pobr family [Alicycliphilus denitrificans BC]
MNDTPLSAGIGNTHRPGDNYVQSFARGLEVIRSFSAAAPQQTLSEVAARTGLTRAGARRILLTLQTLGYL
ESDGRLFRLTPRILDLGFAYLSSMPIWDLAEPMMEALTDRVRESCSAAVLDGLDIVYVLRVHTHKIMSTN
LAVGSRLPAFWTSLGRVLLAALPEDELRARLATLPRQPFTRHTVLDDETLLARIAQARTQGWCLVDQELE
EGLISVAAPLKNRAGDVVAALNISGQANRTSTEMLREQLLPELLQTAQAISRTLRTR
>gi|319764184|ref|YP_004128121.1| hypothetical protein Alide_3516 [Alicycliphilus denitrificans BC]
MFNPTQADVRRFFCAAHAKQQAGQPMEAIETLAGLWIAEHPEYHTDLADVDAALARNYDETPTRTNPFLH
LSMHLSISEQCSIDQPRGIRQAVELLAARLGSLHDAHHAAMECLGQMLWEAQRSGRPPDGDAYIACVQRR
ATRD
>gi|319764185|ref|YP_004128122.1| uspa domain-containing protein [Alicycliphilus denitrificans BC]
MRLHTIVALTDFSPATEHALERAALLASAHGAQLRILFAADGPVARFDDPQARLVQRARHLSRRHGLPVQ
ALPPEPDGAADGVLRAAAQADLLVLDARMRRGWRSLWHGSLLMRMLRRSPCPVLVVREAPCGAYGHVLVD
VDFSLASRAVVRYAGELQDSATIELFHGADRREPSVAQAYRQDVRLQARQRRVRLSDAFHARRNRVAMTT
GTQDAVQQLVVQQQRTGADLLVLGGLPPGLVRSWWQGRRVRRLLGGVDCDVLVCRPQQAGGELVARGAAL
HAGDVGVAVGRAA
>gi|319764186|ref|YP_004128123.1| cytochrome c class i [Alicycliphilus denitrificans BC]
MKKTLTTLFGLSVACATSLLHAEEIKGDAKAGAGKIAMCIGCHGIPGYQASFPQVHKVPMISGQGARYIA
SALEAYKKGERKHPTMRGIADTLTEQDIADVAAYYSEHGKQGELPAKPAREPDAQVAQLLQKGACVSCHG
ENFAKPIDPSYPKIAGQYADYLFVALKQYKNDQGAYVGRSNAIMGGIAKQFTNAELKALAGYVSSLQGDL
QVVPESRFR
>gi|319764187|ref|YP_004128124.1| atpase associated with various cellular activities aaa_5 [Alicycliphilus denitrificans BC]
MKFQGSQNYVATQDLMLAVNAAIKLQRPLLVKGEPGTGKTMLAEEVAQALDMPLLQWHIKSTTKAQQGLY
EYDAVSRLRDSQLGDERVKDIHNYIVKGVLWQAFTAEQPVALLIDEIDKADIEFPNDLLRELDRMEFYCY
ETREMVAARHRPLVFITSNNEKELPDAFLRRCFFHYIKFPEPETMKKIVDVHFPTLKSELLTVAMKTFYD
VRGLPGLKKKPSTSELIDWLKLLVAEEIPLEALQSADNKVSVPPLVGALLKNEQDVSLFEKLVFMNQRNR
>gi|319764188|ref|YP_004128125.1| gcn5-related n-acetyltransferase [Alicycliphilus denitrificans BC]
MTFVEPIILRGRGVRLEPLALEHEAGIAAAAADGELWKLRVTSVPEPQDTRAYIETALKMREEGSRFAFA
VIDEATGRVLGSTSYHDILPAVRRVEIGWTWYARSVQRSHVNTTCKLLMMGHAFDTLQCHVVGWRTDNYN
FASQKAIERLGAKKDGVIRGHALRRDGTIRDTVMYSMRSGEWPETRAQLLYLLGRHESA
>gi|319764189|ref|YP_004128126.1| hypothetical protein Alide_3521 [Alicycliphilus denitrificans BC]
MSLDLEQSRRAMGRRDLLALGAAALAAHALSARASEAWPAKPIRIIAGQAPGSSNDSTARAFADYAAQKL
GVPVVVENKPGGLGMIAAESVARSTPDGYTLLLSLHSQPAQAPALLKKLPIDTDKDLLPIAAMGVGPVVA
VVNKDFPVQTLEQAIAYSKKKPINVGNYSIGSGWQLMLAQLAKDTGGQFNVVNYKGTGAMLMDLYAGTID
MGAGSLAGMGAGLDKGAVRPVVITVGDKSRRLPGIPRWVDAGFKGPAYEDLAECNMLFAPAGTPPEVVRR
LADLFTSSVNESPRIKAVRETLHEEGPILTGDPLRQFIQRTWPSYRRLTRELNLVVD
>gi|319764190|ref|YP_004128127.1| regulatory protein gntr hth [Alicycliphilus denitrificans BC]
MSVPHPPSHAGKRGHVRAHILRGIECGLWPVGAMLPAESSLCAELGVSRHTVRAALADLQSMGLVASHQG
VGTRVLRRKPELTPSHSLQNISELALYARNTMVRILGVKDVTLDEATAEWIGAGAGETWCMARTLRTAAD
QDAPIVLSSVWVPQASKPAIEASGRSGLPVFIEVQRLHGRMVSEVRQVIGISIATREQATLLRCKTREPL
LRIQRWYYGHQRALLEVTDSLHPQDRFQYAVTLRHVSSGGITQSSPHQE
>gi|319764191|ref|YP_004128128.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MKPLAGQRVIDLTQNVAGPYCTQVLADLGADVIKIERPGAGDDTRHWAPNIGEAMSPTYATFNRGKRSLA
IDLDHPDGQALLASLLRPDDVFVHSLKPGSAEQRGLGYEALAEGRPGLIYCAISAYGTSGPRAAFPGYDP
LIQAYSGIMSVNGHEGLPPARVGVSMVDMGTALWSALGIAAAISQRKDSGRGCRIDTSLLETGLAWMTNP
IANHSASGKLPRRMGSATAMLMPYEVFQCADGQVFIGCGNDRLFHKLLHGLERSDLAGDARFATNAERVK
HRDLVHDTLEAATGRLKVAQIIERLEAQGVPVSPVHDLSQVMQDPQIQAVDMARPLDWDDGPAQPLNAIG
TPIRFDGTREFAGHLSARVGADSQALLRAAGMSEARIAQLVHSGAVQI
>gi|319764192|ref|YP_004128129.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDFAYSSTQQEIRAAVGELARRFGDAYWRDCDAREAYPDAFVAAMTEAGWLAALIPEQYGGSGLGLLDAC
VILEEINRQGGNAATCHAQMYTMASVLQHGSAAQKQAILPRIATGDLRLQAFGVTEPDAGSNTLRIKTFA
KKVNGGYVINGQKIWTSRFRQSDMYLLLARTTPYEDVARKTDGLSLFLVDIAKAGRALQPRTIDTMLNHH
TNEVFIDNLEVADEWRVGEEGQGFRYLLSSLNAERLLVSSECVGDGKWFVERARTYATGRVVFDKPIGAN
QGVAFPIARAHMNLSAAELMRNQAATLFDQEQPCGGEANMAKYLCSEASWEAAEAAMTTYGGYGVATEYD
IERKWKETRLLRTAPISNNLVLAYVAQHLLDMPRSY
>gi|319764193|ref|YP_004128130.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
METLLFEKDASPGVAVLTLNRPEVLNALNTAMWRELWALLRELAYDTTLACLVIQGAGPRAFSAGGDLKE
RNGMSDADWAAQHQLIEDVLLQIRDFPRPVIAAMHGIAHGGGIELALMCDFIIGDDTCDIALPEVKRGFL
PGGGGLQNLTRAIGVRKTKQMLFSGARVHARQAHEWGVLNECVAAGMHLPRALELAREIARAAPMAIRTA
KVALQQGADCDFRSGYALDLAFHNLLVRSEDRIEGIRAFNEKREPKWTQR
>gi|319764194|ref|YP_004128131.1| mmge/prpd family protein [Alicycliphilus denitrificans BC]
MDSKVNTDFWSLAETIYARRAPAIEVAAMEHARRAWLDTLACMVGGAGEPAARAAAQAADTAGAEHRALV
LGAASHALDYDDVCMLATCHPSAPVVSALLAGIDRAEGEVTLADLLAAHLVGTETMLRLGAWLGFGHYAL
GFHATGTLGVVGAAAAYAYLLRLPVAQWRTALSIAASSACGLRANFGTDTKPLHVGFAASAAIRAVGLAR
AGATASDDALAGFAQAFAGGARLDPPRWDALTPWAVLAPGFEVKRYPSCYLTHRMIAGIQRLRERHPPQA
GDAPVAIDLLLPHGSVAPLKYPQPRTGLQAKFSAPYCAAAAWVDGHVGLASFSDAAANRGALLPQMRQVR
VAERPGPHEPLETAPVRVTITGPGWIDAILVDWAPGSLQDPVTDEDLLAKWVDCAANGQVAAPAAIATGW
LAAGMDQPMGSLLHSLRRAILARSGNAGG
>gi|319764195|ref|YP_004128132.1| hypothetical protein Alide_3527 [Alicycliphilus denitrificans BC]
MLIDFFYTMRAGKLPVSVKEFLALLEALQAGVVGPRSDDAWSLDDFYYLARTALVKDEKHFDKFDRAFAA
YFKGVEMLTDFRQEIPADWLRKMLERELSPEEKAAIEKMGWDELMETLKKRLEEQKERHQGGSKWIGTGG
TSPFGHGGYNPQGIRIGGAGKNRSAVKVWEQRAYRDYDDQQELGTRNIKVALRRLRKFAREGHELELDLP
DTIRATAANAGYLDIKMVPERHNNVKVLLLMDVGGTMDEHIQRVEELFSAVKSEFKHLEFYYFHNCVYDF
MWKNNRRRFAEKFATWDIIRKYNKDYKLIFVGDATMSPYEILQPGGSVEYNNEEPGAEWLQRLTHAFPKF
AWINPEPQGVWQYRQSIAIIQQLMGNRMYPLSLKGLEETMRLLSK
>gi|319764196|ref|YP_004128133.1| surface antigen (d15) [Alicycliphilus denitrificans BC]
MFHKPPAPAGWPALLFLSIAVVLMQGCSVLRGTPDEHDASTAQTRPADAGGPDAFALDVQADDDAVREYL
SRHMELQRFRQLPDLQAQELTRLLGAADANVRDLLATLGYFSPDITITLNDTPVPDKNTPAHTVQVHVLP
SPRTHIASVDIAVSGDGGAGAQDLARRQAQLRRGWGLPPDAPFTQQDWDAAKAQGLRQLQERQYPTARIA
ESRADVDADQARARLSVHYDSGPAYRFGPLQIKGGERYDAEGMRRIARLPTGEDYSETKLLDTQQRLASS
GYYDAVFLTLDTGHGDPQATPVVAQVRDAPLQKLVFGVGISTDSGPRLSMDHIHNRLPGLGWRAVSKVTL
DRERRLLSTDWTALPAADGWRWFTGLQLQREATGSFDVDSTRLRAGRTQSGNHIDRSYFLQHDTAKSHGV
GAPASSSAISANYSWTGRYFNNATAPTRGWGLAGEFGAGTTLRPARDPFLRALLRWQSFIDLGRVEMGNN
LRRSSRLSLRLEGGAVLAREGADIPVTQLFLTGGDTTVRGYGYRSIGARINNGELFGGRYMTVGSMEWQR
PITVRGNRTDFESAMFIDAGAVADKPGDLSARVGVGAGLRWRSPVGPLQADLGYGLQSRQLRLHLRLGYT
F
>gi|319764197|ref|YP_004128134.1| hypothetical protein Alide_3529 [Alicycliphilus denitrificans BC]
MTSPYNPQPYAAAAAQPPRPPRRSRGRRTLGYLAALLVVLLALLGALWWWAGTGTSLAATLARVAQYLPE
GQSLQAGEVSGSLRAGGRIGWLRWSSHTLAVEVRDARIAWQLAPLLRRQLRLGTVEAAQVTLTPQGEPSH
GESPAEPLQQLVLPLHVELPFRVQRITWAGTSPVTIDGLAGSYRYDGAQHRLAINQVTLAQGRYALLATL
QAHAPMALTATLNGSVHTSVPGSTHALQALAQASVQGQLATADARLNLTAQLRGTEDGGAKPPPLHADLQ
ARIAPWAGQPLQQATAELQALDLAALWPQAPATRLSGSARLEPATDGTGGWRMQATLRNTEPGPWDRQRL
PLSTLQASAAYDGRQWNVPEALLHVGRGSVALQGSFTPATRALQGSAQVRALDPAALHTQLDAAPLSGTA
SADTREDGAVRFAVQLRAAGGRPARGTAKAPAPLRVQELAAQGLWQGDHIAIDRLLLDALQAQVRAQALR
IDTANLSAQGRLQATLPGATAQFDGQVATQGGQGTLALRLADARRTQRWLDGLPGLSGALAGWSLDGSAE
LNAQWRGGWQTLQRQLQAAGIPAGAPVAAATQGGGFTLQARLDAPRLQIARAAQPGGNPAPFTLELLRGT
AALDGTLAQARLQWDGELRQPAAPGQPGWRAQLRLRADGGSRGAGGWQARLGELRVQASADGQPGPWTLS
MAEPLALDLRQSPRLAVDASAGQVRITGPQPGEALLRWQPLRYAQGAQGAAQLRSQGELLGLPLAWANAW
RTDGQGLLTRLGLAGNLVLEGRWDIDAGERLRASASLRRSSGDLNILTDEVASGTAVHSSGQGKGAQAPQ
AVAGAGTPAGLRQAELTIGADGDGLRAQLQWDSERAGRVQADASTRLARADGGWTWPEDAPLAATVRAEL
PDVGAWSALAPPGWRVSGTLSADARLSGTRAAPQWRGQLAADRFGVRSLLDGVQLTDGRLRATLQGDRLE
ITELLVHGGQGSRARIAGYSGNRTPAPQDGGTLSGSGSLSWGAAGGTGASGIAMDLRARAQALQLLVRAD
RQLSVSGDLQARLQGGQFQLRGKLTTDRATIILPEAGAPTLGSDVVVHSAALDRAAAAQAEQAAQASGRV
QAATPPDIAVALNLGEDFALQGHGITTRLTGELEIRSSAATGGQPRVTGEVHTVQGRYRAWGQALDVETG
LLRFSGPYDNPSLDILALRPNISVRAGVQVTGTAHAPRVRLYADPDLPDAEKLSWVVLGRSTSAGGAEAA
LLQQAALALLGRGSGGGTDGIAKRLGLDEIGFKGPQAGDDASEAALTLGKRLSEDLYVTYERSLSGVLGT
LYIFYDLSKHLTLRGQTGIQSAVDLIYTVRYD
>gi|319764198|ref|YP_004128135.1| hypothetical protein Alide_3530 [Alicycliphilus denitrificans BC]
MPRRTRGRQIKGCEWCGHPIGAERGPAAKTCSPECERDRNNAREKARYQRVKDTPEWKATRADYLRRLRE
RAAADPDFAARQAAARRAAVRRYYDRLTPEQLETYRASRRDWYRNLTPEKKAARKYWYGSLSLELKRLFL
LELRQARALQRLQEVNALSGRRVRWDHANDHLLGTMPDGELAAMLAVSIQTIKYHRLSQGIELRRRGGEW
TEDEIKLLGTDADRVIAEKLGRSAASVTLRRLRLGIAAARRTGRLSIQPGAPQAIRISDEMRELFAELEP
LLLPRYQGAGLPVDRLEPWQITEIALRELLATLRKSKARGRI
>gi|319764199|ref|YP_004128136.1| hypothetical protein Alide_3531 [Alicycliphilus denitrificans BC]
MAANTFTLGSGLKYEAAERMRYNDVDGILWIKRVRCADGSGWAHDGKAHLPLRATRREVVEHFGQVYRPE
LVNA
>gi|319764200|ref|YP_004128137.1| hypothetical protein Alide_3532 [Alicycliphilus denitrificans BC]
MTTPSGPTPDAIRAARAAAGLTQTQAAALIYCTLRGWQDWEAGKRAMHPAFFELFLLKAPKSA
>gi|319764201|ref|YP_004128138.1| hypothetical protein Alide_3533 [Alicycliphilus denitrificans BC]
MTDSQGREALSVIHINVPRAMKARWVKASQSREQKLTDWIIEKLESRTMNVYPIPETLAAKYHGAGHALA
AVTGGQIVDLVYIEDALLDYDADAPGALAAAIDDQRLAPTVRRLQALGQVSAGMCGAWEFVEL
>gi|319764202|ref|YP_004128139.1| excinuclease abc subunit c [Alicycliphilus denitrificans BC]
MNKRTISAAEARAILLNDEAESLPFRIINDAGRSAIAQFVNTAAAEPERHSLNAWYAEAEQAANDAGESE
AIVIEMGRLHAASRTPCTLELVDSDFDWTIND
>gi|319764203|ref|YP_004128140.1| hypothetical protein Alide_3535 [Alicycliphilus denitrificans BC]
MALLITQAALLAIGATPERAVQWQPHIEAACGLYDIDTPGRICAFLAQIGHESGGLRYSAEVWGPTAAQK
TYEGRASLGNTQPGDGERFKGHGLIQVTGRYNHARVRDRLRARLGPEVPDFEAQPELLALPEWAAVSAAD
YWDDRGLNALADVGTAEAFVAITRKINGGTNGLADRQARWAKVQAAMAATPAPDVPVVDMGTAAAEARPA
PDVSDFINPAAVAADTITQKETTMAPFIAAVLPALLDLVPKLGTLFASGSETSERNIKAAQVVVDTAKAA
IGAKNEQDLLEQIQGNQEAAAAVRQAIETKWYEITEVGGGIAAARAANERYLEPGVQGFWHNPAFWVTST
LLLMPFMLLVDVLFVHPDSYSGELRVQIVTAVLTIIGVVGAYWLGTSFSSQRKTELQAVGRLPGA
>gi|319764204|ref|YP_004128141.1| hypothetical protein Alide_3536 [Alicycliphilus denitrificans BC]
MPVHDDSHDRRRPAEVRLTQETIDYMTLLVQQAVSEGIKGAMTEETAQQFWGAGIAVLQRQATHHAGRMV
MSGITGLLRRGAVFVVLGGIVYALGGWTALAKMAKVLFTAGG
>gi|319764205|ref|YP_004128142.1| hypothetical protein Alide_3537 [Alicycliphilus denitrificans BC]
MSTRVDTISLIPGSTVCGHRGLGVLGSTILLTTSDGDNGPGILYNDVQPGDEDKEFRAFVANPPPGIFIY
EDGSFVYDGASTSFSYELLVDGVIAGVANVSLSTAATPSPDPVHLAATGAVYCVATAFLTTGDAPSSVHL
VAEGAVYCIAEAMLNVGDPTPGPAPVYLGASGSVFCIAAAVLTIGGVIPPGSLQGFSSKLRTIVVKDDAL
ALRRTFFKRHRERLDYRFDFTQWLADCEDEIASHTAECDGPLSVVEVAKSDGSVIVLTTGGGGGPPSRLI
CTIFTTGGRRKEYEVLINVSEC
>gi|319764206|ref|YP_004128143.1| hypothetical protein Alide_3538 [Alicycliphilus denitrificans BC]
MAAFVDDFDGAAGQWIRERTGWAHLGGYYDALQTDGSGNMGVAARSNDGRAISHETGATSHYAEVVVGTG
FLADALGEVGLAVAVVDGTNQLNLYYRPSETMFMVLINDSSVLETAQSALVAGDTITFAYQASGNVFEVS
RNGTLVMSGNASSYAAVLAGATKTGITLTYGSSAARTDVFRSFKSDVYAGPPDVTAPILTNATGTSTGYT
TANGSVSTDEANGTLYYIATGNASESAATVKAGQSQAVIAAGVQSVSLTGLSPGTTYRIHYLHRDAAGND
SAVLSSGTFTTDAPDVTGPTLTTPTASATGAATATGSVTTNEANGALYYLASTNETETVATVKASGASVP
VSVTGVQGVSVSGLSASTTYYLHFVHSDAAGNDSTRVSSPAFTTAASPSTPTLTLTQLRNNAGTLLANET
GTTVHVYEVASGNKVATLTGRTTDAAGTLLAPSNAMTVGTEYRVVVVLASGAEGLQKVTATV
>gi|319764207|ref|YP_004128144.1| hypothetical protein Alide_3539 [Alicycliphilus denitrificans BC]
MAAGDYPQFKTTSGTDCPATLWGITSWPDGSMKFCAAMIRVPASVPAGGSLTIEIQNGGIAPAPSPRTAD
DLLAADIKVELTGVTNLSGLWTASLNDAIASASDVTVIGSGAAGKIWRIGGDCKQAAVAHGQLYCWHYVA
ALTNSSGGLLGLRYLGRVALPWADVSTPTATRCVLTAQLKIGPTVRRTFQGHDTSETPGANIGMDHYTSW
FTADTNARWDYVQGDGSGAADGVVRVKHDKVKVTRSKLIPPFDLTIAADSNSSTEYRPYARCFIQRAMGG
TGERDDLGLMTSWSVRHLLTQAAVDETVIRAQGLVSAGWRITAQSRTTKEIIPTYAPSANYAGIGAPKTD
WYFMISGDKYSGYTDPVVEQSLWSEDYETSHRPSTCYYTYLVTGEPQYLDLLVDMSATLLANSPTGTAQL
NTAQPITLTNMYLAGTWAGRDVLINSVLYKGGGWLTQSFGPRAMAWGLRDITQAAAIYPDVCPRGTETKK
YFRDVVNASLNVMNVYNSAMGPEWNALGAYDFNMYPEYYSVWMDGYLSNTMCQVSTILPSSAATSFRKFL
SQFWENLASSRDLAAGFTPHAALYDANGVRITNINNFLGQIGVNLSLSTATNRATLTPGELGKVCVPTDG
DVFLFPEKYGNNPFAPTYPYRTLFYAVNCSGQTMQMSLTPGGPPVTIPTNASGLPIFARVANFAPYATAE
YGGNSAIMANVCGCIRHHVACGDSIPTALADSNAKIALDGVTYTDDPKNAYVSAYPT
>gi|319764208|ref|YP_004128145.1| hypothetical protein Alide_3540 [Alicycliphilus denitrificans BC]
MQSFSNYLRNKIVDHTLRGLPYAPPAQLWVRLYTTATSDNGGGTEVTGGGYAPVSIPCTTTAWAGTQGAG
STAASAGTTGLTSNNVVVNLPLPSADWGPEVTHWALWDAQAGGNMHFHGALAEPKTIIAGAPLSFQAGAI
QIIIGANVGG
>gi|319764209|ref|YP_004128146.1| hypothetical protein Alide_3541 [Alicycliphilus denitrificans BC]
MNAWLEIDSGADGCQINLVNPTDSPPMAGPGLTLPVLAGISAIQRPLSIPGIASAPTSSMDAQLDNARGV
LTQLWGQSPPLRRAARVRTDAGSVFEGIITTLQAGVQLTIGMESGADRPLSDNLPLRTNAVWGGWKDVKV
LPWVWGGCTLAPIQYSEDQRTFVLADHPIADVDQVTRDDVPTAAYAWYNGVDSTGRAVAFLELAQPLADG
ERLAATVRGRMHPDTGLLLQTPAEILHDLLANLARAPVQWSDLDDYRTQTQEWVLGGLLDDNATSIRAAV
DGLMQSCGGAWSAAMPGIAMAWPAAADPAAPAQRVDELTATDLQAGTDATGIYTSLRVLYDYDHAAQRYR
RAIQLQAPDAIKAYGTLEMEWPAPWLRTPRHAEQLGQRMLSWLARPRWRVTWRQSFADVPTGAWVDVAHA
ISPVQGRHRLVSAELDLSSAQLSCAIESPVGDAPVIETARLSTAFEPVIQPGITVEIANGEIIFTARDEQ
GNAIAGAAITLDGGLTRIADAAGRVSFPVQRGRHTLRIEAQGYAPAETIVVI
>gi|319764210|ref|YP_004128147.1| hypothetical protein Alide_3542 [Alicycliphilus denitrificans BC]
MPSVHRILSGRHNLTRTASLIASSVRASTAIERVSAQRAGGGRVRLVGSYTGHEAAQVQVEIVNAGGVPR
ASVPQFVGVGNGTLQVQGVDALAPLQAFTITLADLGTATATAGLDVREVRIRAKTPGEAGNQVRISVQPN
LARIATGKALLGDWSVSTPTQSGAQWDFGALPLSARDELDPASPRIAFGADPQVYRQWRRFKDGEWQFGL
SPALQRSVSSGTPVYSVSGSYVVTVTDGVATETYGDAALSQPAIVTFHDLLAALAPSALVEVAGVIVADR
VVGGQAAIDVPLRTSAWLLSQGGRFKLQDVAVPPNAPTQTIVVRCVNADMVGQERWSVQGDVSGTLAMAT
TGQPYSSEPIAFTVPAQDAAAQNNGRWSFKFSPISRDEGVGLPSMCVRPFRFGKNAAPRNVTFRYTKRPP
ADCKCSDMPTPRLALECLGLTDGDAMDLDPEYLGRLQTLYQWRKQFHASNWKKFYTAKKDLDFADLITSS
FAQCLQDLYQSPPAVAGAVTEWDAALLEMKTDLTSLEGLQYTNFAGQNLSALDNIPQYHATVGSVSVITK
RVLNTDYATDGTNEYLLYEQFSAAINDLVRKYLARLDYCRTLGGIVPKSDPSSTDAGGCWVDHGGDFWWV
DTEGYYLPAFTNQGYVSARRNTETGEAYSTMEFGFGLVVACPERLLPGDEVTIRLEKVDGTRNYGVGDEV
VLQTVAAGPAWLTGGIDGSDEQTWRVAASATGVLPDYVVPTDGSAAPVYSQAGIDLLLSLGGIPFQLGDQ
FTFAVEAGQYRWRTEEGAWSAAADIPASGAAPLADGLQLQFDPGAAPSFVAGDAYRYQVHQPGAASHIQD
ASASAWAWSGDSANMVIDLGAQHAIGAIALARCRLPAGAALTAQLSADGATWGPAIVLDATRAHSVQFVQ
ATARHVRINVAAADGGSIGWVWVGEPLQTAYSANTAQRRRRWATTRAAGPNAGALYAGRGDGWQLAWDDA
LRESDANALLAVVDWAQERDEPLLLVPHHLHPQDAALVRCAADALDIDDVHSYQPNDADRRLLSATLDME
PVYA
>gi|319764211|ref|YP_004128148.1| phage tail tape measure protein, tp901 family [Alicycliphilus denitrificans BC]
MALKPIQILINAKDNASAVFTSLQAKIAAVGAAIASYFGIQAFAGVVKGAADFEGAMSRVLAATGATNEE
MVQLKQAAQDAGANTQYTSVEAAGALENLAKAGLSAKDAVATLPAVLQLAQAGDISLAESSELVTKAIMG
MGLAFTDAGRVADVLAMGANATNTSVLGLAQALSYAAPVASSLGLSLETTVAIIGKFADAGIDASRAGTA
LNSILSQFSNPASKFRQELAAAGIITNNFEDALHQLAAAGPAGSKAIIAVGQEAGPALRALLNQGMGALD
DLTAKLRDAEGSAAATAKVMQDNLNGSLNGLSSAWQTVKDVLGTPVLPVIKEGVDQLAAALRGAVADGTI
QRFGETFAAAFQNAMKWVREFVGSVDFTAVLAKMQGWADQTAAAMTRLGEWATSTGNAVSLAYNVMTAGA
NGVLTAIYGIGSVFAEVAAAVMTGVAKLREGLAAVTFGQLSESFKLAAEDARNAAQGFEDAAQAMRDKAA
ESLSDMADRAQGARDAFAGFASGMSTSGEQASTTSRALATVAGELQKTAEATAAANAAQQKKAQADAAAK
AAAEQHAQAIADMREEYEDLIASGNLQAAAEKFQQINKALRDTSAAGKDSAAAAQETAKQVEAAFSRLGV
TSAQALKEQAASARRDFEIIRDSGIATAEDIQGAFKVAADAAIAANKGVAPAWVQAQAAVRGYVIETDAA
GKSTIRLRESIDATASASGSAAGAMRGHWGGVRESIDQASEALREYNQRMKEKYGRPGEGDPPGGGSPDD
KGGKGGKGPQQQWVWTRAAIIEYLEQAGLDKLLAEDLAQQFVQPDGSVNYLASDAQKRWGGKNSTLAEAL
GKMVDFYKYGEGKFDADQRTQFLQRQQGGGASQQPVPPPAPSAPPQAPTQGRQSGMSAPISITINAHGVN
DPVKLARMLEPELAKLARLAR
>gi|319764212|ref|YP_004128149.1| hypothetical protein Alide_3544 [Alicycliphilus denitrificans BC]
MALIFAKNQYTIPRGRTFFNPIDSATDEYLGEIYMGNCPGFSISIETEKAEHYSSETGLREKDASVVLEV
KRSGSLTCDNMSGANTALFLSGSTGKVTQAAATVVDEEITVIPGRYYQLGLSALTPVGARKVSVVTVKSA
DGVTTYAAGTDYVLDADRGTLQILSGGTIVAGKIKAGYTKAAVEWEGIRSGSSGELRGALRVASDNATGA
NRDFYMPLVSLIPSGDLPVIADGTDFAQMQFDADVLKPANGEAIYVDGMPLAV
>gi|319764213|ref|YP_004128150.1| hypothetical protein Alide_3545 [Alicycliphilus denitrificans BC]
MYSLVPAIVTRLHNALGVCWHVSDGTMPHNRRPLPRAVVLMQAPDVSTTSGPGVSIAPRYVVQLAVSSDA
TAFAQLDAAFDVVIAQLHHWRPEGFHVARLQLQAARDLQVVEQELFGFELLFTTTTTRMGCDA
>gi|319764214|ref|YP_004128151.1| hypothetical protein Alide_3546 [Alicycliphilus denitrificans BC]
MPAAFPFDAAQDLVTQGVQQHLANASVSLMAGGPTVGALYDSEAPQGSPFQDVATAARHMLSLCIVGLGD
VAEGDEVIVTTRQWPAGQRCRITTPVEPDAGGWAAFEVVPVA
>gi|319764215|ref|YP_004128152.1| phage protein gp20 [Alicycliphilus denitrificans BC]
MAEMTIFLNDAFKAATLTTALNRRPHKPGFLGSQGIFTPKPVRTITVGVESKNGKLALIQTSERGAPLAQ
ADADKREVRDFRTVRIAKGDTLHAHEIQSIRAWGTTSELQQVVTEVAQRLSNLQDDVDLTHEHMMLGAIQ
GVVLDADGSVIRNWYTEFGIAQPGELDFELDDPTTDVRGKCAAVVRAMQRAAQGGWLPSTQVHALAGDDF
FDKLIAHDHVRDTYLNQQAAAELRENLAFDSVRFGGIVFHNYRGTDDNSTVAIDPGKCKFYPVGGKDVFE
VAQSPAETFDFVNTPGQPSYAMLIPDRDRNAWVRPEVYSYPLHICTRPGMLQRAKAF
>gi|319764216|ref|YP_004128153.1| hypothetical protein Alide_3548 [Alicycliphilus denitrificans BC]
MTLHTEGRHTAEHIASEANGTRSREVVTLLAGNNLPAGAVLAKLTTGADAGKYTVLNPASTADPADGTRV
AVAVLFAPVDATAGDRPAVVNARDTEVKAVAIGWPAGITAPQKTTALAELAALGIVAR
>gi|319764217|ref|YP_004128154.1| peptidase s49 [Alicycliphilus denitrificans BC]
MTMSHLPQIAGRIFNTPLLIHPQKLDAMIAGLGGRLLGVPSSRIQHAGEAAQAVLAPELFSTRRGERAER
GYRIVDGVAVLSVSGVLVHRSRLDMAESTFFYGYNDLAADLEDAMANPEVHAVLLVYDSPGGEAQGAFEY
AQRVHAMRGRKPLWAISDGMAASAAYLGGSAAEQFAITSTGIAGSIGVVARHVDLSRALDAEGITVTHIF
AGSHKVDGNPYEPLPESVRKDWQAEIDNLYGMFIDAVATHRGIDVRAVRATQAATYTGQAAVDARLADRI
ATTDSLIAELAALRARSYPAGPTARTTAEKGATMSGNTPGGQQAATTTAAPAAQFTQADLDTARAEGATQ
GAKAERERTSAILTHEAAQGRTDLAIQCVTSGLSADQAAAILGAAPKAPAAQAGAGNQFAQHMAALGNPK
ITGTEPSQEEAGPAAIAASWDMAFGIQPGRA
>gi|319764218|ref|YP_004128155.1| phage portal protein, lambda family [Alicycliphilus denitrificans BC]
MAPVRPKRSRTTRRLASQSAAPSMAAHRGAATGRDDHYFTQWHPGLGSADADLLSDLPNLTARSRDLGRN
NGLMAGAMQTQRDNIVGSVLRLSASPEYRLLGITREQAREWGNTVEPRFRSWGDTTECDAQRTSTLLGIA
HQALTGSMLNGDAIVLPLWLPRRDSRWSTRLLVVESDRLSTPPWMAANPSVRAGIETDQYGAPVAYHIQR
YHPGDLCGSYAVHTGGFQQWERIPAFTAWGRRRVIHLHDKDRTGQSRGKPLVSAVIRDFKMAGDYSSNEL
QASVANSLVAAFLESDLSQEASQSLFGEKPRDEWNTSVDEARGSLQSLRHLKPGAIIPLPVGARLSSYSP
GRPNAAFEAFMLAVLRHIAAGMNMSYELLLKDFSKTNYSSARATLLEVWRYFSGRRRWLTDVLLRPVYEL
WLEEAVNAGEVEAPGFYQNAYAYSRCRFIFGGRGWVDPVKEAQASVLRMNAGLTTLEQECAEQGADYEEV
LDQLAIEKSMKEARGLSTEPVSAARRSGLSASEAPLAGDEKEEGAAGA
>gi|319764219|ref|YP_004128156.1| hypothetical protein Alide_3551 [Alicycliphilus denitrificans BC]
MGIYSHLTQSALEELRDKLVASLTQRLTAPTSASSNGRQVAYQQRTEEIRREIAAVNDELATRQGCATRR
PIYVV
>gi|319764220|ref|YP_004128157.1| hypothetical protein Alide_3552 [Alicycliphilus denitrificans BC]
MTAMTSTSTDRIDPIAILREEAIAAALAHGADRCEELADNLVQRYAQRVGGINAYVRIRRARTATIKAEV
ARRHNGKNTREIARDLGVSQRYVQKIVAQLHVVAN
>gi|319764221|ref|YP_004128158.1| terminase gpa [Alicycliphilus denitrificans BC]
MNFSELELEQLAEVERRLQRGMATWAAPEPMTLDEWARKKPFYLSAESSYVEQAWTPWPFQRAIMSCISN
DDVAAVYLKKSARVGYTKILLAAIGYFAEHKRRNQGLWQPTDEDRDEFVKSELDPMLRDVACMRTVLPSY
LSRHKDNTLQQKKFIGSMLHLKGAKAAKNFRRISIDVGYLDEADACDRDVEKEGTPPALILKRLEGATFP
KFVAGTTPKLRGFSLIDDLCAAADARFSYQIACPHCGGRHSLTWGGKDEAHGFKWVGGDPATVRHLCPHC
PALITQAEYLAVAEQGIWVSDCGRYHLQHDGRFTAPDGAPLPAPARIAFHVWTAYSPSVTWAAITSDFLE
AHAEYLQGKPEKLKTWTNTTKGESWEGDIERTDADELQNRAEPFKLRQVPRGCLLLLCGADTQDNRVEFH
VWGYGLGGEMWTIDHHVVFGNPATTELWDECEQWLRTAEYQHACGQTLRLYATAIDTGGHHADAVYAFAH
RLKGLRVHAIKGASGRERSIDNGNTKVGYRWNGKVERQGPVLWHVGTNLAKDRLKARLDIPTPGPGYIHL
SDELSGEWFKQLAGEVRATRQLAHGSESRWTPIRKRNEAIDCAAYAIWLEERLDLWAPRRTKFWEELRQL
LNPPEDLFSMAEQQQQPAAPAPARPPPSQPAQPAAAPAAAPTAPARAAASRFAPIE
>gi|319764222|ref|YP_004128159.1| DNA packaging nu1 [Alicycliphilus denitrificans BC]
MSQPANTISHDAAARVLKLAPADLARLVDQGAVPRVSKDAYQLIPLVHGYVDHLRAEQQRIVQRPTQAEI
AEHLDISTRRVRELATEWAIDSREVSLGEWRQRYLTKLREEAAGRAGTGDLDLVAERARLAKVQADRIEM
QNAVTRKELAPAELIEEVLSRAGARAAKLLDTIPGELKRRCPQLTADDIATIATTIAKVRNIAAGASLAD
LRDDEDEEGDADDHSDERAERLAAMVDDMRGGVLDGEGA
>gi|319764223|ref|YP_004128160.1| hypothetical protein Alide_3555 [Alicycliphilus denitrificans BC]
MNPATHALHKALIRAAKAVIDAWEKWLKAMTT
>gi|319764224|ref|YP_004128161.1| hypothetical protein Alide_3556 [Alicycliphilus denitrificans BC]
MTTTHVYHLVDPRCRTVRYVGKTATPKARLRAHIQESREAQNTEKKRWIAELLALGLQPVMVVAATCTSE
PMARIVESRHCHQHAATIYNIHDPAKGAGDLKRQEAQTA
>gi|319764225|ref|YP_004128162.1| hypothetical protein Alide_3557 [Alicycliphilus denitrificans BC]
MQHITQTLSTCKQPSLGSPSAKGEGGFKTPLPRQIAAGVFARLTAQFGAKLLDHWAAVPGVRDEWGQALA
DLHPLEIERGLRATQGRAFVPTLGEFMLLCRPALDPETAWHEAVAGMSVRDHGHPGEWSHPAVYRAATGF
AWELRTSSYPAQRKAWGLRLQREFARGWGEIPPPTLRITEAPVRTGPPPDHIRTQIRAQLASAGRFPKQP
DAKP
>gi|319764226|ref|YP_004128163.1| hypothetical protein Alide_3558 [Alicycliphilus denitrificans BC]
MEDQTNTTGPQDTKRPASQYYWGDWHRDLALQSCQLAARGLWHEMNCLMHQGVPYGHLTMPTGKAMTLQQ
LANLAKISKRACARLLAELEEAGVFSRTEDGTIYSRRMVRDEKARNARAAGGKAGAEHGDKGGEHGGKGG
RPASKNKPAAKGEGGSKTPLDPAPKPPPSSSSSSSIPPVTDATDAAGGAPPPPPPASPQPAEPDAQQPPQ
CALTAESSRGAHWTAILYVLAQQGVAETQARTFVGKLHADYPAPGLVQDAIRRTVVEAPINARAFLRATC
QALAGERQYQPRASPAATANAQRRAQTLEDLTGTDDETPHAAHHADTIDVQATVIG
>gi|319764227|ref|YP_004128164.1| hypothetical protein Alide_3559 [Alicycliphilus denitrificans BC]
MTASPQIPIIIPSAGRADAVLTRIAGAILYVPESEAEAYAQHNPGVHIEAHPDDAHRNLAAKRQAILDRW
GSVFMADDDIAFVSRLYLPGNNREQHLAPDEVHDLIQSTAHAAQQAGCHLYGFSNHPNAKHYYPHRPIQL
TLYINASAFGIHQGGQLYFTERTTAAESHWVNLLNARLNRKAWSDTRFCFAQAPGSTFFRPGGQTAHRTL
ATELADTIFLRRMFGQAVQAKRARGDAAKAHPYQRSISTPL
>gi|319764228|ref|YP_004128165.1| parb domain protein nuclease [Alicycliphilus denitrificans BC]
MQLEHLDPRTLKRHPQNSRKHSQEQLQQLMQSIERFGFNGAVIIDEDDVILVGHGRTEAMIRLDRPTIPC
MRKTGLTELEKRAYVIADNQIGLNSEWDDEVLAAEIAAIQEGGLDLSDFGIPLGALADLEQPPVATSASV
RTLEARADDTPLTHEEFEKEMARADTAGLLPIVPMYAEHHEAFVIVCDNTIDEAWLRNRLGLEQPMQSYK
DRKGARTNVITVQQFRQRIQ
>gi|319764229|ref|YP_004128166.1| hypothetical protein Alide_3561 [Alicycliphilus denitrificans BC]
MSLFITDANRPTILARIAGQCTDEGGCLLWGGATWHDGAPIINVGGQCRRVRRVMWEALHGWLPPPGKLI
VAKCRHLRCVSPDCLCCMSVRKLRRLDARRGAFSHSAANVARALAARRRATIPEAVVQQVRDFEGTCAQA
AQATGVSLSHVKSIRAGRARKPLTGNVWAGLPTSPNPAPLPTTDEAYGLRVGGVYAAHNIKKNSNGSFPS
PLSKGNSNLDPSLVTGLS
>gi|319764230|ref|YP_004128167.1| hypothetical protein Alide_3562 [Alicycliphilus denitrificans BC]
MSGGIQLSAAMLNTEAVSQLLRDMAGPKARAAYVAALNDTGFHVRKVWQEEMRSKFDRVTPYIERSPRVV
RATPDNLTVTIEPAYMGGKGVDPQKILQAQTHGGPRRDKRSESALRRVGLLPAGYQTAIPKTPYPGSDDG
RGNLRGPFLVQLISYFQAFGEQGYRANMTDKRKKKLRNQQDIGYVTTRKTYKTTLGVRFFISMGRLRDTQ
ASHLAPGIWAAKGLHDVEVQPVLMFVKAGSYQPRLSPDDVTKAADVQNYLDRRVRYRVRQAAGV
>gi|319764231|ref|YP_004128168.1| hypothetical protein Alide_3564 [Alicycliphilus denitrificans BC]
MRTTISIPPGLAYGADEAMPDMPESMSVDDAIYHTVHDYPGGVAALAPRMGVPSSTLTHKANPNNTTHHM
RPSELVKLQHISGNAAILHAMAAALGYTIVRATPSQAQGSMLAATTHAQAEFADFVRAAADPVMRIEAGQ
GSTTPTPNEVRRAQYHAHEAHAAIDQVVAAMRANQRPVPKGD
>gi|319764232|ref|YP_004128169.1| competence-damaged inducible protein [Alicycliphilus denitrificans BC]
MPESFLLALLERAERWAAAAGTSLKHRGSWTPATFAAGRRHEERALLSVAAEVYDLVGATPEGCVLLAEL
GWNPEAGALPTHEGLQARYANHRAGLAVGAQQKER
>gi|319764233|ref|YP_004128170.1| hsp70 family chaperone lhs1/orp150, putative [Alicycliphilus denitrificans BC]
MNDHELRADLDGLQGQLLATQAIVRSLLMSHPDPRQAIEAAHAEVETLAALALARNLSDALNAGIEQARK
ATFPSARDFRGPSGQ
>gi|319764234|ref|YP_004128171.1| hypothetical protein Alide_3567 [Alicycliphilus denitrificans BC]
MVEFKERLQAAMDHSKVSREVLRAKLSVTRVAIDKLLDGRSKAMSAENCAHAARFMGVSIYWLATGLGEM
CPEDSDRTPTTHMAAECVAHYRSKPEWWPMQTVTLDEYLTLSERQQGIVEGRVREMLDGKSSGNRSAA
>gi|319764235|ref|YP_004128172.1| hypothetical protein Alide_3568 [Alicycliphilus denitrificans BC]
MARPADVGAPQAAQPATPAAKKEGAFGESWQRRTYLENRGIPDAQAASYRHKQDCEKKLADLRAQQSSAN
NNLAGATFLQSLAAEMQATATMCDVRSRELNAELDAMKKELRELQAK
>gi|319764236|ref|YP_004128173.1| hypothetical protein Alide_3569 [Alicycliphilus denitrificans BC]
MRTVAVGVVVCVLGAAAQAVSAQVRCTMPNGQVIEQRLSSVCPRGASKAETLDGKPAGVRPPSAVPAAPV
VTDRLLRRSQVVTRAEFASAWPLTVERGTLRCMYPVPTMPQLHAHLVVVDGVFYALNGVAHSHAAKMGWR
PIDAIWRDNQAIPGTKVPITPLVQRAAQLC
>gi|319764237|ref|YP_004128174.1| hypothetical protein Alide_3570 [Alicycliphilus denitrificans BC]
MQATPAQQPLSPTQGKYTPGPWNIVKSFNGFVITRAWTSGLHQRLRTGHLRSKEEAQAALKAHLARAGAA
A
>gi|319764238|ref|YP_004128175.1| hypothetical protein Alide_3571 [Alicycliphilus denitrificans BC]
MTAAQAQQGVHSKQLAACAFWLQEHARFDNSYRKLIELHTKENRKARPSEATKTALFDGARAAHTQINES
LEVIHRRGGLLFVGAAGALRAAAQLRGGEA
>gi|319764239|ref|YP_004128176.1| hypothetical protein Alide_3572 [Alicycliphilus denitrificans BC]
MTDDQAFDVEYGYWYNAACERFYRRVDFVCNFVQLVGGSAAAAAAWGGSGGLVVASGLLLACAAAISLTV
QPAVKAERHERTKCAHLAIKRRRHQADEAAVHEAITDAQAGGPVGLGALAMPAYNDAVRAMGREQGVRPL
RWWERVAAFIA
>gi|319764240|ref|YP_004128177.1| hypothetical protein Alide_3573 [Alicycliphilus denitrificans BC]
MKALQAPLIHHMARGRLYRAIVSLPAALCPRDEPLHERVVFFDGPRENPGEYLETLLGHAWHVDTLGWCA
DGYIYNLQSAASLIEEGMSDDGNARLLETGWGGDAPIHYADPARTDFFMAPVMQARLRELHAQVCKSTPG
T
>gi|319764241|ref|YP_004128178.1| hypothetical protein Alide_3574 [Alicycliphilus denitrificans BC]
MSHSHLALPALGTELPALGGTLGAFVANADGSTRAIIVAPHLHSITGAWGKYGKRIPGARGSSGMASTVA
MADAGCEIALAMRALKIGEHDDWFIGSQLEMLALDEHSAGLFDKKAIYWTSTQYSAGTAWCQDFENGDSY
PSVKVYEFRAVPLRSIHLQDLRASALQDASRIPAASPALA
>gi|319764242|ref|YP_004128179.1| hypothetical protein Alide_3575 [Alicycliphilus denitrificans BC]
MPATQQALPAIGTHLPAHGGTLGAYFALPDGSLRALIYAGREHEFNGAWGLYGKDVADARGIDGMASTVA
MAVAGSDTAKAMRALTINGHNDWFIGSRVQMILLSENVPEDFDKDALYLTSTQYSAYFAWCQDFELGYSH
TNGEDYEFRAVPLRCIQLQELQPSALPGEAGIAAVAEASAA
>gi|319764243|ref|YP_004128180.1| hypothetical protein Alide_3576 [Alicycliphilus denitrificans BC]
MNAQPHTPPAAPAPDFDLDALCAKARADLADDIGLDVAIAAVEVARDFWRLRRRLLGGLQPAQGGAA
>gi|319764244|ref|YP_004128181.1| hypothetical protein Alide_3577 [Alicycliphilus denitrificans BC]
MTAASWFAAIALTLALGWLAAMDHIAPDATSTALQTAQEDAAALASRDWVARQVCEGRPFEWLDDKTLVC
HREARP
>gi|319764245|ref|YP_004128182.1| hypothetical protein Alide_3578 [Alicycliphilus denitrificans BC]
MKSFAHLLNEINEGSTHAALTADMAELLRTVQTTARAGKLTVTVKVAPAARNVGGGDIDRVHITVDRTLA
LPKPETPTDFFYLTEDGETTRNHPRQQSLELREVTPTSQPAQLKEAS
>gi|319764246|ref|YP_004128183.1| hypothetical protein Alide_3579 [Alicycliphilus denitrificans BC]
MSDTTTNTLGALIAREDAPEALQVAEQLAASVAGALNLRQHGDATLAMLPGGYELRDVTSIIEKAAPVRN
RCQGTVMLGDVDSLLAYCDDQACQEFGYIYADPDGRSITAIFNDQRLRAVPGWRDHRAHFTAQLTPEFQK
WMSNDKKAMSQGEFAEFIEDNFADLNGQDAQTLLNVATTIQATTGINFSSARRLQDGQVQLTYNEVIDAK
AGADGALKIPQVFTLGLRIFKNGEGYKLTARLKYRLAAGGVKFWYELERPERAIEDAFAGYVAAVREKSG
YVVLIGKP
>gi|319764247|ref|YP_004128184.1| hypothetical protein Alide_3580 [Alicycliphilus denitrificans BC]
MQHIGTLFLAKARPVVDVGPDGEFRLTLALIDNLGGGQKEGYRVRWTGPDARAFWDAQQRNLLPGAVLRA
ELTHLRQHMGNAYPHVPELRARVVRLEVVPKASACAAPQPSNQEHHAAA
>gi|319764248|ref|YP_004128185.1| hypothetical protein Alide_3581 [Alicycliphilus denitrificans BC]
MNKPKPVRQLRPIAAAATPQTAATAAPTPATEVLRIAAETIVQRGAQRDSLAGDGAAPAERSMAATVAAF
NALEGATLTEAQGWRFMQILKLARAATSERNGVFNPDDYVDGAGYAGLGSEAAERAASVAGAQV
>gi|319764249|ref|YP_004128186.1| hypothetical protein Alide_3582 [Alicycliphilus denitrificans BC]
MNATTADPVNDLIRDMMENVAKYGGENTTTFLMVQAIKELQRQHKALDCAGLAASPTAQTAPAITSETGN
PASARGAAITSENGSATQAAPAAVALQADLHDLLMHVVCDTRHPERQIQASRMLEQIGRASPQPPAQEPA
EPLPPPGIYAGVHYATFLRREAHKHHEPKAGALRNAARMIDVLLAEVQRLHRELIVSQAQEEAQKPDGWL
PVHFSGGRFYGGPLKTEDEAKAYIEQVHRSNDSITLRARPFVFADRHPAPQQAVPVAVGDASDTARLDHL
QQRGATIDLVPGEGDFYPTRFRVGGLHATVSTDIRPAIDAARAQAKEGGTL
>gi|319764250|ref|YP_004128187.1| hypothetical protein Alide_3583 [Alicycliphilus denitrificans BC]
MTWMILADGAEQHLPPGTEQPQYTIEAIAHQLAIINRFTGATRRPYSVAEHSLLCADLADVAGCTPVVQL
CCLMHDAHEIVTGDASSPVKWELGQAWGSFESRHARALRAHFGLQCAFTGARATIRHIDLVALATERRDL
VPWDPLRHMPWPVLDTPGREVPPAADVDLRRAAREQMHWTEWRDAFLKRYEQLGARVDAQARRWREARA
>gi|319764251|ref|YP_004128188.1| hypothetical protein Alide_3584 [Alicycliphilus denitrificans BC]
MKPFAPINRAQRRQAKRIDARWQAAMRQAQRCSSTGGLQAIAHSSSYTPERAASLSNDVRMSWYRLTQGD
GSPTDFDDLGAVLNVCCVCAEGLGQPAIDVAVRAQRAALGIKTRLERLGRLGVDAQSLQDIPPALDLYDE
LLRHLSPLQFNRALTETARRQRAGIVLREEPARDPINPANP
>gi|319764252|ref|YP_004128189.1| hypothetical protein Alide_3585 [Alicycliphilus denitrificans BC]
MLASHIESVHIHLPPSFSPEAMAAMERLMDRLGRTEPAPAAAAMAQTDPSNPPPPGHLWSGQGGYYICTM
PAFLALPPRHLIAATVERDGLAWGGRGKVITGADCQVDGRANTIALLADGGHPAAEWVAKHEADGHSDFY
LGSRLEMLMCNLYAPHRFEKEGWYLTSSQYSALSAWCQDFEYGYSGPNLKDYEFRAVPLRCIHL
>gi|319764253|ref|YP_004128190.1| hypothetical protein Alide_3586 [Alicycliphilus denitrificans BC]
MALTTDLDIHKDATALLDLAVDVQARIPRVFRASLGARIADECVKLLVLIGRANAARLPSDRVRHIEMML
ECVDVVTYLLRAAHDHRSHLIDHKVWGRGMQLTTTIGRKAGGWAKSARAGNVRTSAAPAA
>gi|319764254|ref|YP_004128191.1| retron-type reverse transcriptase [Alicycliphilus denitrificans BC]
MRSPSADSCPDGDAATFPALLQAYINCRRGKRNSASALEFEMRLERNLCDLYDELVSGAYQPGRSICFPI
TRPKPREVWAASFRDRIVHWLLYSHIAPRFHAAFVADSCACIPGRGTLYGAQRLERHVRSCTRNWARPAH
YLKCDLANFFVSIDKHVLRERIAARVHEPWWMALADTILFHDPRQDVEVRGCASDLRRVPPHKSLFNAPD
DTGLPIGNLSSQFFANVLLDALDQRVKHRLRAPYYIRYVDDFVLLHPSRTWLTAAHHDIETWLPEQLRLQ
LNPRKTIRQPVDRGLDFVGQVISPWRRTTRRRTLASALQRIEQMPADALLAAGNSYLGLVRQATHSHTER
AALCRALLKRGHAVEGMHLSKVFRKAAA
>gi|319764255|ref|YP_004128192.1| gp37gp68 family protein [Alicycliphilus denitrificans BC]
MSENTKIEWCDHTFNPWEGCTKVGPGCDHCYAETRNARFGGGVAVNWGPGAPRRRTSSNNWNKPRAWNAA
HAEFFAQHGRRQRVFCASLADVFDNAVNPSWRADLFDLIDATPALDWLLLTKRIGNAWKMMANACGVSQL
SARLPLPNVWLGATITSQEEADRDILKLLAVPATRRFLSMEPLLGPVSFEGLFANPANPADGTNALEALD
WVIVGGESGPGARPMHPDWARSLRDQCQAAGTPFLFKQWGEHDLSYDRDRDDPDYRRCATIGRQPGRWIN
LKGGHGFNGERVHYAHRVGKKAAGRLLDGRIWDEFPRVATCHPVTMYYGSPDCKSHAFPLSGRTEIEG
>gi|319764256|ref|YP_004128193.1| hypothetical protein Alide_3589 [Alicycliphilus denitrificans BC]
MSADEAFLILDLADWHAGAWPGLRGHAGEIAGRIPPEKRPTVVQGDRTTAERELLRLAQRHPQGNFVLFT
ATHTAVAVKTPTHVNLHGAPIACTTVHRLAAIGEDDSIPF
>gi|319764257|ref|YP_004128194.1| c-5 cytosine-specific DNA methylase [Alicycliphilus denitrificans BC]
MKRDDFTLLLPFAHELIIDNFAGGGGTSTGLEKAFGRPVDIAINHDPEALAMHAINHPRTLHLCESVWSV
DPIRVTRNQPVALVWLSPDCKHFSKAKGGTPVSRDIRGLAWVGIRWVLLCQPRVLMLENVEEFKTWGPLM
ELLDGTLRPDPARAGETFLAFCAMLSTGVRADHPALLECCGFLGIDPAGEMAQRLVKGLGYDIDWHELRA
CDHDTPTIRKRLFFVGRRDGLPIRWPEPTHGEPTSRAVLAGKLAPYRTAAECIDWEVEGTSIFGRKKDLA
TNTLRRVAKGLWRHVLGNPDPYIVDTNRGPQRIVDLQVSGGEPRAGVVAPFLTEHANASNQRTMLADNPL
RTQCAQVKGGHFSVAAPMIAPMVLTNTTGHTGAAMDGQMPTIATGGHHALMVAHLTHLTHHGERSGTAPS
IPLPTVTAAHRSEQAMVAASLVTIGYGERPGQDARAHHPVSPARTITAGGIKQGVVTAFLEQANGGFYNG
DGRAADAPASTLTASGAQQRLVMAYAVKYYSNGGQWQGLGEPMHTLPTKGRMGLVQAVQVPADCVAPEHR
ERARLCAELLHTHLPEHFPAPAEMVLMQHEGQWWVLVDITLRMLRPRELYRAQGFPESYIIDRIPDPKLL
FRDGHQMGDPLAIPTVPLSGTAQVRMCGNSVCPPVAEALARANFGHEAAIYGRAVA
>gi|319764258|ref|YP_004128195.1| hypothetical protein Alide_3591 [Alicycliphilus denitrificans BC]
MKSEMPTILEEWQQVMQPVEDAPQELARTEMINPGPQAA
>gi|319764259|ref|YP_004128196.1| hypothetical protein Alide_3592 [Alicycliphilus denitrificans BC]
MPPQPQTTGLLTQVLIADKYGPRLGTDQLAAVLGITRGAVLNQISDGRFGIPTYVDGGKRWADYRDVAAY
IDNCRAQALQQRGH
>gi|319764260|ref|YP_004128197.1| integrase family protein [Alicycliphilus denitrificans BC]
MASIVKIGQRWRALVRRKGFPSYCKTFAVKTDAEAWARQIEGDMDRGQAPRAAAVVGRVLTVADLIDAYR
KMRDASRPVADTSSEHYVLRTLRRALGEHDATRMTPDDLVGFARARAEDGAGPYTVNMELSKLGTAMRYA
ALALKVKVPDVVAEARPLLAHLALVGGGGKRERRPTEDELHHLLLRLESGFGAVYADAVRFAVLTAMRRG
EIVALLHDDVDRIKKLVLVRDRKDPRAKKGNDQWVPLLGDALAIIDRQPRIEGDGRIFPVHPQTLSKYFK
AASDALGIADLHFHDLRHEGTSRLFEQGFAVQEVALVTGHKSWTHLKRYTNLRPESLHRRTPGGDTAGGA
>gi|319764261|ref|YP_004128198.1| hypothetical protein Alide_3595 [Alicycliphilus denitrificans BC]
MKLNIITTILTLCSLNPIYAQTNKNNIDMGCDSTCLNPGVMGVIDLSKNIAISITRGVIDSCQAYAGSNG
VPSGATQGSVIVSYDENPKSSTYGQIIHINSSGCSIPSQPITVTRQCSAYVGRYGIASGSQGTFQITTEG
NTYKPNYGSVISTDISGCYVSPPPPPQPPGCYGTAIQTWTDAFSKNGKQCAGAPPVFTAPNGITSANSYP
GYFGATGSGVMYFKCISYGSNIWSLNAGFYNQGVAPFAPAQTCN
>gi|319764262|ref|YP_004128199.1| hypothetical protein Alide_3596 [Alicycliphilus denitrificans BC]
MKTNIIIMACLSIVGAANAQNKVVACENLEKYNLCHINEKGELINISPEKIPAPTEVKSNYPIGSGQIAG
TQVQDGSVSSALQAQQKQAALIESVKNAPTSVQPVDKYTDGKIDRKIFSCAEMAPIRYWAKNPDNPPNKE
VRTDQGFLRGKTDAYGWYEVPMSYTNGDGTVVEGFGGAVGWRQPIYKNGVFDHWSGWPKASPVEMDRADW
GWNFSSIGFCENKTY
>gi|319764263|ref|YP_004128200.1| hypothetical protein Alide_3597 [Alicycliphilus denitrificans BC]
MDFFVTTKCVKFILHLLLQVLKMLYQTMMPKNKSQNLHLKLLNAI
>gi|319764264|ref|YP_004128201.1| hypothetical protein Alide_3598 [Alicycliphilus denitrificans BC]
MKYIEVFKKMMFNRDNQIKELLIVYNSYYMVQAAIKIQGLPETPQTVIRFMSSNNFDCLHKDIINTVEEN
YSMLMNCLSSKDKRKLYALFD
>gi|319764265|ref|YP_004128202.1| helix-turn-helix domain protein [Alicycliphilus denitrificans BC]
MDKDEQRLKMIGASIKRKREESGYSQKLVAEHLGITEKTCSEYERGKTQPPLLKLIAIAEFFQCGLDELL
VGISPAPDDQAKHIASLLHGLKRADRHHIVKIVEKIVLIAKGKIKIDT
>gi|319764266|ref|YP_004128203.1| hypothetical protein Alide_3600 [Alicycliphilus denitrificans BC]
MNTGIRIKSLNGDTYTETVIKDGKTFINVYGPDGQLVDVMEEVASYIPPRKDEDMSKIAK
>gi|319764267|ref|YP_004128204.1| relaxase/mobilization nuclease family protein [Alicycliphilus denitrificans BC]
MINAVMPNCGTGPIEDAINYLKSDFDHEGTLRKNKPRDFAGDAEQCIFVGNSIDRKHKYVSGSLVFRETE
QPTDEQLKVIVDQFRKTFMAGLDYGEHFVDYWNVHTDKGKIELNYVIPLAELTTGRQLNPFPPGQTTYEF
KDAFDAVINQSLGYNQVVADPTKASNSKFETKLLEKSTSKVADDFRKIKPTKDEVSDCVAHQIINGKINS
RQELCDFLENFGEITRINDKFISIKPYGSEKAFRLKGPVYEHGADFKKIAKEYQSAKSGSQNKLTDKQFS
EVKMKLARLIKSRKDFNQSLISKPVGRRNKNRVYGDKKPVNDGGGSIGGSGGGTAPASVKVEEPKSQPVK
TEPVKQVEQPAKEIAPKTDVQPVSKSNDKESSNNQADDSPGSSPIISGGSNSGGSVGSLSAELSSLTNEI
ANTRDPKKLAELEAKAAGVRAKLSSASMAEQVKKLRDSLNQQEDLNRKKFKK
>gi|319764268|ref|YP_004128205.1| hypothetical protein Alide_3602 [Alicycliphilus denitrificans BC]
MKDKIQQEEKMKKNGIIINSETTTYYKNGKIHREDGPAIEWRNGNRHWCLNGCLHRTDGPAIELVETEQR
CNINKWSINGYFHREDGPAVEWGNGYKEWWYYGKKLTEETFEEWKRNWKS
>gi|319764269|ref|YP_004128206.1| DNA adenine methylase [Alicycliphilus denitrificans BC]
MKDQENMTTFETVDLFGFDAEGVAERSSSHVVQVKPFKSQLLKWVGNKQRFAHEIISYFPKFNTYYEPFL
GSGAVLGTLQPQQAVASDVFKPLIEIWQTLQENPKELMDWYEERHAQIVGENKVEVYEKVLASYNKNPNG
ADFVFLTRTCYGGVVRFRKDDGYMSTPCGVHKPMPPHKFNERVKEWHVRTKQTKFINQDYRLAFDSAKSG
DLIYCDPPYSHSQAILYGAQSFSLQELFDRIAWAKKKGIFVALSIDGSKNTENVLLELNIPKGVFEQEAY
VNCGRSMLKRFQMEGESLEDHVVTDRLLLTY
>gi|319764270|ref|YP_004128207.1| hypothetical protein Alide_3604 [Alicycliphilus denitrificans BC]
MQANPRFLNQPRKFWAHVKLLSQLIGYTDRSTRTIRRYSPQEIYFAYNNAGLSTSWMGTNTQPSQELIDL
VHYSQYRADVLTNQVQHNLMNKDQAELLFNQLYNHYRPSCPIPMNKQKGDMKNFNFFTGIVNILIHEAIG
RGQCNFDPRELIVVTKQDEPLRTLSRRVDGAYPGILNPKAIWEIKEYYYTTTFGSRVADGVYETLLDGLE
LQELQDNEGIHVKHYLFVDAYKTWWEDGRSYLCRMIDMIHMGLVDEVIFGREAVQRIPEIVKDWR
>gi|319764271|ref|YP_004128208.1| integrase family protein [Alicycliphilus denitrificans BC]
MAGKLITERTGVNGDVSFLVRIREAGVAVSKTFKTKKEAEKFIREVKTKIDRGESVDITKIKKMTLAQIF
DEYLKHNTVAKGKKYDLEKLKLEIGKVPLSNFKAGTFALYLKTKLEQEIPDQAKKKKSHPLYDGHQVVDP
DTGKLKKKTYSESTIRKYYYAIKTALFWHAKHHDYTFDRKPFDDNPPPKAWEPRDRILEAGELDRLLEAT
NKMYVKREEWKCLILWQYYSCMRAGETLLMKWDEIHLDEKNPHHSYIFVPKENTKIADKKNAEDRKVPLR
PEFFHFIKDRLMKLKKDGQQLVFGDYWSSSSVLAARFKVICKNAKVSDFKIHDLRHCAVSWYFVNTNLTD
IEISKISGHIELSTLKRYATLRHSDIGVKLWANAT
>gi|319764272|ref|YP_004128209.1| cytochrome oxidase assembly protein [Alicycliphilus denitrificans BC]
MAWLCAALVLVIASLSAFIRLSRAGQGCEPWPQCQGIAAAEAAQPGLGDSVAMARVGHRVVASTTLLLVL
AMAGLALASGAVLRTEARLALVLLGLALFLAVLGRWSGQSRLPAVTLGNLLGGFAMFAVSVRLALVAGRT
GAAGWRPVPAPWLGVATVLAWVQVALGGLVSAGQAGLSCPALGACDWRAGSWQALDPWVMPAIDVLPTHS
EGALVHMLHRWSGMALTLVLLVLAWQAWRLGRRAVAAWLVVLPVLLVALGLVQVWLRLPLPLVLAHNAAA
ALLLAVLMGLRRPRHAAPW
>gi|319764273|ref|YP_004128210.1| hypothetical protein Alide_3607 [Alicycliphilus denitrificans BC]
MHHDDEDEKVPLIQQLLDSPFLLLFLGVMIPMVVYNLWGVIDILTIPLAK
>gi|319764274|ref|YP_004128211.1| cytochrome c oxidase subunit ii [Alicycliphilus denitrificans BC]
MSAILPPSERLWWKHPLDRVEGIWIAISFIWCMVMFFMMVFWHIYGKQNLATETYKTTPEKFTAQTQAAV
DKWTVRTETEQKVPVVAPPEGADVYMIGRLWNWWPILELEKGKTYKLHLTSMDYNHGFSLQPTNINIQVV
PGYEHVIKVTPNESGTFSVICNEYCGIGHHEMLGRIYVK
>gi|319764275|ref|YP_004128212.1| cytochrome-c oxidase [Alicycliphilus denitrificans BC]
MAVSTTYRTCPRTGLQFEAQAEKLMMANAFMAVVALLVGGLLAIGVVLTRWPAVHWLPADTFYMVLTAHG
IDMLIFWIIFFEVAVLYFASSTLLRCRIATPKIAWAGFVLMLVGAVWNNITVFQGESSVMMTSYVPMMAH
WSFYLSLILFAVGALVACGVFFGTLVVAKREKTYEGSIPLVTFGALTAAIIAVFTILSGAFILVPTFLVS
VGLLKSVDPLVYRVVWWAFGHSSQQINVAAHISIWYAVAAIAFGAKPMSERVSRGAFLLYILFLQLASAH
HILADPGVSTEWKIVNTSYFMYFAVLGSMIHALSIPGAMEVAQRAKGYNKGLFEWLRKAPWSNPTFSGVF
IALIGFGFLGGISGVMMGTEQLNLLIHNTIYVPGHFHATVVVGTTLTFMALTYFLIPALFKREMIAPGLA
KLQPYLFGFSMYFFCLVMMGAGTLGVSRRHWDMAFSGNALAYEWPGAAYLMMGLVGIAGVAAIAGGAIYI
YVTVGSLLWGRRLDAGAPSPRFTPVSRAAPTAAAQTYGSAGFVAPGTFVLAMFFLVAFVLYYFVNWKYLG
QLWSLS
>gi|319764276|ref|YP_004128213.1| protoheme ix farnesyltransferase [Alicycliphilus denitrificans BC]
MHTTTLKPATRNAAQVTRDVISLFKLRIGMLIMITALVGMAITPGPAPSWAETLVLALSVLLASASAGAF
NQYVEYESDRLMKRTSRRAFATGALPHHPVWLVLMVALLAAAVAAAWLVLNGAAALHVFLGAFFYGVVYT
LWLKRRTTMNIVIGGLAGSFAVLAGAAAVDPDLGPLPWLLALVLFLWTPPHFWSLAIANRADYAQAGVPM
LPVVVGPKRAARTVLLCTTLLFIASLTPLAYGAGPVYGLGALAGGVHFVYKSWQLARRPEDRAAAMGSFF
ASLVQLSVLLVAACLDAALR
>gi|319764277|ref|YP_004128214.1| redoxin domain protein [Alicycliphilus denitrificans BC]
MVWSLPPRLLRGVASCALGLALALPAMASTDGSADLGLDREAALRASQAAIGRKVGEHILLNREGQPVSL
ASYRGKPLLVSFIYTGCFQVCPTTTRSLQETVEGLQKSVGPNQFNVVSIGFNQPADSPQALKAFATQYGI
RQPNWEFLSPPGAIVPALAQDFGFVFQATPAGFDHVLQVSILDAEGRIVRQVYGESLVPAELGEPLKMLL
AGTPVESNELVDQLLDRVRILCTVYDPKTGAYKVDYTLPIQIAGGVTFFIAMMIFFINEWRSSRKSARHK
GTRNA
>gi|319764278|ref|YP_004128215.1| methyl-viologen-reducing hydrogenase delta subunit [Alicycliphilus denitrificans BC]
MSLPGSALDPTGHSTSPPPLPRLANAYRALEHGFDAAFGSAGNPLKQLGALGFLLLWLLVASGSILFIVL
DTSAAGAYRSIASLADVPWMLGTALRGLHRYAADAFVLVMGLHIVREWLLGRYRHWRRMIWWTGVPLVGL
VFVSAVGGFWLNWDRLGQYSVVATAEWLDALPFLAAPLARNFLGDASLSDRLFTLFIFIHIGVPLLAVFG
LWFHIQRISLAKVFPPRPLAGSTLAVLLALALALPVHSQGPADLGSLPTTLALDWWLLFIHPLMDATSPT
TVWVLLGLAFVLLALPPFLPTATRQAVAVVYPEHCSGCARCFDDCPYSAITMVAHPNGKPGMRLAQVRAD
LCASCGICAGSCPSSTPFRSAEQLVTGIDMPQWPIHALRRQLVDGLRALPGPMRLVVFGCDQGARGRLDA
PDVLHFKLVCAGALPPSFIEYALRAGADAVLVNGCRAGGCAFRLGQRWTEQRLTGEREPHLRQSVPHDRW
DVAWTDTGDEPALAAALDALRQRCQPGAHPASEESHR
>gi|319764279|ref|YP_004128216.1| hypothetical protein Alide_3613 [Alicycliphilus denitrificans BC]
MNRALNWTGQALLYGSFALALGVFSRWPVYHPLPDGMAQVKVSFIHHGARLAECRPYTAEEQAKMAPNMR
KAMKCERERSPVHIAVDIDGQTVLDQNAPPAGLSRDGASTLYQRFNVAAGEHRIAVRLKDSQSASAQTHQ
LERTVTLQPAQVLVIDFNPDKGGIVLQ
>gi|319764280|ref|YP_004128217.1| cytochrome c oxidase, subunit i [Alicycliphilus denitrificans BC]
MSANTTFPGRTAKPAASPPAARPGASYQLSLPHDGRLPLARGWLWLGLAALIGSGLFSVLLVVSRTPYVN
QWLPAANFFHISLVLHVDLSVLVWFVAMAGLLWSLHGHPRAQGLGWLALWVTGGGTLAMALSPFVDPGEP
IMANYIPVLESPLFLAGLVVFALGTALLVLRGLLAAPRLGLGYDGRGALHFGLSAAAIATAVALLCFAWS
WLVLPTSLHGKAYYEILFWGGGHALQFTWTLLMLVAWLWLASACGARIVLSPRVTLLLFLLALAGVFSTP
YAYLAHDVASVEHRNLLTWAMRLGGGPAIVPVGLAAVLGVLSLRRLDTALRPLRAALLSSVLLFAAGGMI
GVFIQGSNVRIPAHYHGCIVGVTLALMGAVYRILPALGYQAPQGRLATWQPWLYGTGQLMHIVGLVWSGG
YGVQRKVAGAEQVLRSTAEIAGMGLMGLGGLIAIIGGLLFVVVVLRAMRQAASLERMKEPRP
>gi|319764281|ref|YP_004128218.1| oxidoreductase fad-binding domain protein [Alicycliphilus denitrificans BC]
MIKKFQELLQWLFLRAEGLFNAAFGDRINPFYHLGAITFFLFWIVGGSGLYLYIFFETGISEAYTSVVDL
STKQWWLGGILRSVHRYASDAMVLTMVLHMLRYFAFNLYHGFRWFSWITGVMLIWMVYASGVNGYMLPWD
HLAQYVTVTSFEWLDWLPIFNGSLMRNFLYSEHVGARFFTLLSFMHLGLPLVVLMVMWIHVQRVPKARTT
PPRPIVIGLMTTLLALSLVAPVHSQGGQTDLARAITRIEPDWFYMAVFPLLTEWPLGRVWALVVGASVLV
ALLPWWPPQFRRGEKRMHQVQVQGEQGASAAIKVREGETILDAGLRQGLALPYECRNGGCGLCLCSVEQG
QFEHRPYQRSALPDADKARGKALMCCAVPREDMVIDVAGFTGAAAEAQEVYSATVTQMERLAPDVMRVSL
QLPEGQSLPFVAGQYINILLDDGQRRAFSFASRPGAGSQIELHVRLVPGGRFTTHVFEAMKVGDTVRFEG
PLGQFTLRESTHPILFIAGATGFAPIKSIVEDAFARGVQRPMRLYWGVRQPQDLYLLAQCEEWQRQHGNF
TVVPVVSEPAPDDGWTGRTGLVHEAMLSDFPDLSGNEVYLCGSVRMVETAVPAFIAQGLDENFCFSDAFV
MAAPAQAQQPAG
>gi|319764282|ref|YP_004128219.1| phospholipase d/transphosphatidylase [Alicycliphilus denitrificans BC]
MIRVAVLSGLGHAVFVAAGLLVYVMGTRIGHQRRHPSAAVAWVLGIVAFPYLIVPLFLLFGTRKFARPAR
RTRGQALLVPDGAPAWAARLLASMELAPAMRNRQVVLHADGGEALQGLLATIASARHRLDVCTYVLGHDD
VGRQVAQALLACARRGVNVRLLVDAMGSMRTPPGMLRALRRRGVQVRRFMPLLHNPLRGRTNLRNHRKLA
VADGLRLWSGGRNLASEYFVDRPGRPAWIDLSYEVCGPLAELAQAQFSTDWRVAHGLALRKGRRARHVHA
PDLLAGPEDGPLAQWLPSGPDHADDTVHALLLAAAYHAQRRIVAVTPYFVPDEALLDAWCLACRRGVRVS
LLVPARSNHRLADIARERALRELSAAGAQVWLSPAMVHAKAVLIDDELALAGSLNLDARSLFLNYEAMTA
FYGAQELRWLSQWCARQIAAARPYHARRPSLVRDIAEGVVRSVGFQL
>gi|319764283|ref|YP_004128220.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MSVLRRPSSLRLRLLVFLLAAIAVTALVQGVLAYRHALAETDALFDYQMQQTAFALRAGLPPDARAGGGA
RPEYQHDELIVQVWTNEGLRIFESAVGVALPQIAVLGFTQVQARGTTYRVFSLQTRSQVIQVAQDMAARR
TMARALALRSLLPLAAMAPLLALAVWWAVGRLLAPVERVRGQLARRQVDDLVPVSDAGLPSELQPLVREF
NGLLARVQHAFEAQQHFVADAAHELRSPLAALKLQVQGLQRASDAGARMLAVERLAGGIDRATRLVEQLL
VLARQEAQATAGAPPKPVVLADLARQAVADAAPAAQQRGVDLGLALAPEAEHASVPGQPQALEILLRNLV
DNAIKYTPQGGVVDVQLQAEPGHLALVVDDSGPGIAPDERQRVLQRFHRGPQDGGTAVAGSGLGLAIAES
IARMHGTRLELSSAPRLGGLRVCVRLARAAERGEGAHA
>gi|319764284|ref|YP_004128221.1| response regulator receiver [Alicycliphilus denitrificans BC]
MLHPMRLLLVEDDTMIGEAVRDLLRAEHYAVDWATDGDMADAALATQQYDLVLLDLGLPRRDGLAVLRSL
RARKDRTPVLIATARDGVAQRVEGLDAGADDYVLKPYDAGELLARIRALLRRASGRAEPVYEHQGVTLNP
GTREATVQGRPVVLSAREWAVLEPLIARPGMVLSRQQIEDKLYGWGDEVSSNAVEVYVHGLRKKLGAHIV
LNVRGLGYMVPK
>gi|319764285|ref|YP_004128222.1| protease do [Alicycliphilus denitrificans BC]
MNTLLATPRRLVLALVAAGALGATGAGLITAHEARAQLAQPVAAAAAPAAAALPDFSAITARYGPAVVNI
SVSGMRKVSDDDGANSPTAHQRGMPGITPDDPFYEFFRRFGIPMPDMGGQGQRSVPVRGEGSGFIIDPNG
IVLTNAHVVKGATDVTVKLTDRREFRAKVLGADPKTDVAVLKIDASNLPTVQLGSSDDLKVGDWVLAIGS
PFGFENSVTVGVVSAKGRSLPDDSYVPFIQTDAAVNPGNSGGPLFNARGEVVGINSQIYSRSGGFQGLSF
SIPIEVATRVEQQIVATGRVEHARLGVAVQEVNQTFADSFKLPRPAGALVANVDAGGPADKAGLKVGDVI
LKINGRPIVASGDLPAFVGQQAPGDKVQMEVWRQGRAETLAATLGNADDKAAKVARGDDAVGKGQLGLTL
RPLQPDEARAAGVENGQGLLIEDARGPAAMAGVQGGDVLLAINGMPVKGVEQVRAAMAHAGKSVALLIER
DGDKIFVPVRLG
>gi|319764286|ref|YP_004128223.1| arsenate reductase [Alicycliphilus denitrificans BC]
MSDITIYHNARCSNSRGALELLRERGIEPTIVDYIKEPLGVAELTALVARLGVPVRELLRSKEAIYQELN
LDAPSVSDRQLIEAVAAHPVLLNRPIVVSPKGARLCRPPQLVLDLL
>gi|319764287|ref|YP_004128224.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MPTLPATGYPLLPIQRALRSIAPIVLALLLALPVLAVLGAWLPQAEGGAQSGAILREMAATVLPDYLWTT
LWLGLSVAVGAAVVGTATAAAVTLFDFRGRRQLEWLLLLPLAMPAYVTAYAYTDFLQFSGPLQVWLRATF
GLEGRLLPEVRSLGGAVWVFIFSLYPYVYLLARTALGERAAHLMEAARLLGASPARRMRSVALPLARPAV
AAGVALVLMETLADFGVASYFGIQTFTTGIYKAWLSMDDRLAAAQLATFLLALVALLLQLELRAQRRMRF
ATGGVGRAGSAEAQPTRLRGPGCAAAWLVCALPVLMGFVAPVLFMLRPLAADWSVLPWDRFVQWAGNSVR
LGGITAVLAMGIALALAFAVRRRGGALTRAVVQLVGLGYAVPGAVIVVGLLLPVGWLQAAAPGWGLSALL
TTTAVGIVWAYLVRFCAVALQSVQSGYARIPASLDDSARMLGVGGMGLLARVHWPLLKRSTAAAALLVFV
DVMKELPATIVLRPFDSDTLAVVAYQLARDERLGEAALPSLALVAVGLVPVILLSRTLRGSSR
>gi|319764288|ref|YP_004128225.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MFLEVSQLEVRYANRPQAAVQGVTLGLAAGEIGVLIGPSGCGKTTLLRAVAGLEDVAGGSIRLGGEVVGA
PGRSVLPEQRRIGMVFQDYALFPHLTVGRNVAFGIHDLPRGEQAQRVREALDLVGLAGSEARFPHELSGG
QQQRVALARALAPRPRLMLLDEPFSNLDVDLRERLAHEVRGILKTANATALFVTHDQLEAFAIGDRIGVL
ESGRLHQWDDAYALYHRPATRFVADFIGHGVFAPATLVQQGSHVVARTALGDLTDIDGCLLPSSYPRGEC
DVLLRADDVVHDDAAPVRARIVRKAFRGSEFLYTLELEGGLTVMAHVPSHHDHAMGDWIGIRPQVDHVVT
FPRG
>gi|319764289|ref|YP_004128226.1| phospholipid/glycerol acyltransferase [Alicycliphilus denitrificans BC]
MLRVLRACWRVPRMLLHALLGLWVVALRFPRLAEEQQQARVQAWALGLLRCAGVTLELHGRPPRTGPVLL
VANHLSWLDIPVMHAARYCRFISKSDVQDWPIVGTLATAAGTLYIQRESRRDALRMVASMHEALLRGEVL
AVFPEGTTGDGRELLPFHANLLQAALAADVPVQPVGLRFVDGQSGATSFAPSFVGDESLLGSIWRTLSAP
GITAVVHFGTPERAQGRDRRAWSQALHAAVDELRRR
>gi|319764290|ref|YP_004128227.1| amidohydrolase [Alicycliphilus denitrificans BC]
MKILIQNGRVIDPASGLDKVCNVALAAGRIIAVDREPKDFTPSRVIDAGGCLVLPGLVDLAARLREPGHE
HERMLESEMSAAVAGGVTSLVCPPDTDPVLDEQGLVEMLKFRAEKLHQARLFPLGALTRGLAGEVLTEMA
ELTESGCVGFSQADVALASTQVLQRALQYAATYGYTVWLRPQELHLGKGVAASGPLATRMGLSGIPVAAE
TIALHTIFELLKAAGGRVHLCRLSSSAGVELVRQAKAEGLAVSCDVSINSLMLTDVDIGYFDSRARLTPP
LRQQRDRDALAAALADGTIDALVSDHTPVDEDAKALPFAEAEPGATGLELLLSIALKWSRDGGVPLARAL
ATVTSEPARVLGSALGTLQASVGRIVEGGVGDLCVVDPDAHWTVQADALASQGKHTPFSSYELPGRVRCT
LVGGQVAFERG
>gi|319764291|ref|YP_004128228.1| aspartate carbamoyltransferase [Alicycliphilus denitrificans BC]
MLYKRNPQLNKNGELIHLLSIEGLPREIVTHILDTAANFTSVNDREVKKVPLLRGKSVFNLFFENSTRTR
TTFDIAAKRLSADVFNLDIARSSTAKGETLLDTIDNLTAMAADIFVVRHSESGAPYLIAQHVGPHVHVVN
AGDGRHSHPTQGLLDMYTIRHYKKDFSNLTVAIVGDVLHSRVARSDIHGLTTLGAAEVRVVGPRTLVPAD
MAQMGVRVFHNLEEGIKDCDVVIMLRLQNERMSGALLPSSQEYFKSFGLTPEKLLHAKPDAIVMHPGPIN
RGVEIDSAVVDGPQAVILPQVTFGIAVRMAVMSIVAGNEA
>gi|319764292|ref|YP_004128229.1| uracil phosphoribosyltransferase [Alicycliphilus denitrificans BC]
MSSAPSAAPGAVRQGHLALDAEALYAELLRGVRALRGPHTHLAGIASGGAWLAERLQRDLGLAGQAGVLS
SAMHRDDFAQRGLASSAQTALPFDVNGADILLLDDVLYTGRTIRAVINELFDYGRPACVRLAVLVDRGGR
ELPIQADFAAARVLLPHTQLLSLARAEGGAFHFDVKEV
>gi|319764293|ref|YP_004128230.1| holliday junction resolvase yqgf [Alicycliphilus denitrificans BC]
MTCPAAAVPAHFQSFLAFDFGLKRTGVAVGTRMLRTATPQGTIRAEGDARFAAVAERIREWQPDALVVGV
PCHPDGAPHENTARALKFARQLRGRFGLQVFEVDERYSTTEALAAGAGDADAASACIILEQFLRNLP
>gi|319764294|ref|YP_004128231.1| hypothetical protein Alide_3628 [Alicycliphilus denitrificans BC]
MPAPPAPMNLTHHFLIAMPGMEDASFARSVVYLCEHNERGALGLIINKPTDISLAGLFEKVDLTLGREDL
TRQPVFLGGPVQTERGFVLHDPVRGTPEGAPREGEGGGGDESPYASTMSIPGGLEMTTSKDVLEALSHGA
GPRRVLVTLGYSAWGEGQLESELAENSWLTVDADASIIFDTPVDERYERALGLLGLQSWMLSRDAGHA
>gi|319764295|ref|YP_004128232.1| response regulator receiver [Alicycliphilus denitrificans BC]
MSSLDAVITPGADGAQNEQDLGPLAWVLDELRKSLDSAVKAMRRFVRDAEIARESDLAALDAGPLRIARQ
QLHQASGALEMVGMAPPALLLRAMESAVQRFVQRPELCSDEAAATIERASFALIEYLECVLAGKAVSPVA
LFPQYRDSQALAGADRVHPADLWPVERRPREIELAAGVAEPLAYGPEARARLDSAVLRIVKNADPAAAAD
MRTVCQGFAAAQSKPEVRAFWGICAGFFEALAQGALKPDVYAKRVASRVLMQYATLAKGDDGIGERLVQD
LLFFCAQAAADAARMPALQAVREAFGLQGHRPVDYDQPRFGRFDPAVLAQARKRIAAATETWSALAGGDR
NKLKPAADQFSLVCDSLRKLHPDSDSLAQSLTRAMDATLRSGEPPSAALAMEVATAVLYLQASLEELDGA
GDAMAQRATRLAERLDGVVAGGESQPLEPWMEELYRRVSDHQTMGSVVGELRATLSEAEKSMDQYFRQPE
NPEVLRSVPGSLQQMRGVLSVLGLDQASLAVVRMRDMVERLLIDAVAEGERQQVFEKLGNSMGALGFLVD
MLSYQRAMARKLFVYDEELGELRILMGRVRAPEAAGAEGQAEPPLADLASPEAEAGVQAVELPPEPAVPE
PPAAPALELPTPAAASAPVASDADDGQELLDIFLEEAREVVAAGQAAIDALHAEPGDLSEQTTLRRAFHT
LKGSSRMVGLSEFGEAAWSMEQVLNAWLAEQKPMQAPLLQLSADALQAFARWADDIAAGTADHWQVQAFR
AAADAMRQDGTLVPLAAPTAAQPLAEEEAGVAPDAPIDAAMPGELPQEQPPAAAGPQAIAQAPEDAAISG
FDLLLPDAEDAPQQDFADTCIDAYDPGRDAQAPAPAPDLAEEVDFALFEQAMQVGADVQESPAQEPAGVA
AEEALADDQPQAPPAHAFDIEQAEAAPIAEPDEPAAEPAFEPSPAWADAAGSVEPDVPSPADEAVKVIEH
LRIGIPLYNVYLNEADEWSRRLCTSLQEWSLELHQPLPDTAVALAHSLAGSSATVGFTALSGMARTLEHA
LQHVQLLPHGLPEHAQVFNAAADDIRRLLHQFAAGFLKEPNALVLERLQALLLIEVSSSGRVPLEESAGE
EADAGTAAEQGALGSILERELQVDEAIARAVAASVDIDDDIDALDIIDPDLFPIFEEEALELLPALGTAL
RQWSARPENLGARNELLRALHTLKGSARLAGAMRLGELAHRMETAVEQIGADGVTAADIEPLLSSFDALQ
AGFDALRTIGAQPLPGPVTVEPPPAAPAASTAAAPAAAAPGQGRAPVAAPLAWAAPAGSSPMPPRVAGGQ
SVRVRAQLLDRLVNQAGEVVIARSRLDARMSQMRASLGDLTDNLERLRQQLRDIEVQAESQMQSRLALSK
DSAAGFDPLEFDRFTRVQELTRMMAESVNDVATVQRNMQRALEGAEDDLVAQGRQARELQRDLLHTRMVE
FEGISERLYAVVRQVSKETGKQIKLDISGGSIEMDRGVLDRMTPAFEHLLRNCAGHGIEAPEVRTAAGKP
AVGTITIALRHEGNDVSVEFRDDGAGLDIARIRAKAVAQGLAPADAQLSDAEAANLIFLPGLSTATEVTG
LSGRGIGMDVVRSEVHALGGRIETWTEAGKGSAFRMVLPLTTAVTQVVMLRAGGLTLGVPASLVEIVRRG
SAAELEAAYATHAFSDGQENLPFYWAGALLQSSACSTEAAGKYRPVLILRSAAQRIAVHVDEVLGNQEVV
VKNLGPQLSRLPGLTGMSVLASGAVVLIYNPVALATVYGDQARAAMRAPAAVQPEAGVPAQAPAAQDHQV
PLVLVVDDSITVRRVTQRLLQREGYRVALAADGLQALERLQQERPAVVLSDIEMPRMDGFDLARNIRGDA
ALRDLPIIMITSRIAQKHRDHAAQLGVNHYLGKPYSDEELMSLVRHYARLAAPMENA
>gi|319764296|ref|YP_004128233.1| chemotaxis sensory transducer [Alicycliphilus denitrificans BC]
MSVVNPFGKLFHRKPAEPDADLNPSYMAADSMIAGPLSQEYQADGMGSAQGVGGVSQYYEEGASEDDLVA
LPLLGSATATAHQRRLLLLLGIGLLALALVAGWVLRQANRSAQQLTATGQSLMQSQRLAKSVTQALAGSP
QAFADVAESSGVLVRNARALRNGDGELDVQALGEAFGPDLDAIMPLVERAERNAGAVMGQKKILTQVGDA
LRTINSQSSDLLEIAETIASLKLQHNAPAADISAAGQLVMLTQRIGKSANEFQSSQGGSPEAVFLLGKDL
NSFKEIAQGMLDGSAELRLTTTRDAQVREQLQALIKLFDQTRTQAGAILGNLQGLVSAREAQAAIVADSE
PLRRQLEGLQGKLSAQSGVGAGQFAALVVAGLFVLLCGVGIARVQLLDSRNRQNAAEALQRDARRQEQEA
KRVNDANQAAILRLMNELQSVAEGDLTQEATVTEDITGAIADSVNYTVEELRVLVGSVQNTAARVAQTTE
QVDNTSTELLATSSEQLREIRETGRSVLDMAARINEVSSQAQESASVARQSLLAADQGLQAVQNAIGGMN
AIRDQIQDTSKRIKRLGESSQEIGEITELISDITEQTNVLALNAAIQAASAGEAGRGFSVVAEEVQRLAE
RSADATRQISALVKAIQTDTQDAVAAMERSTQGVVEGARLSDGAGTALTEIDRVSRRLAELIEQISVSTS
REAELANGVADNIQHIFAVTEQTGEGTRTTAQQVRELSHMAEELRRSVARFKIA
>gi|319764297|ref|YP_004128234.1| chew domain protein [Alicycliphilus denitrificans BC]
MANREALKDFQARLAVRLQEARDEGVSVSSWLAVESAGGHFLLPLAQLGEIFPWGGAQSVPYTQSWFMGV
TSLRGTLTGVVDLAGLLGAVQPRSEQALLESSVLALNGALEVNAALLVDRLAGLRGVQAFVASEPSAQGS
PVYFGSAYVDEQGMRWQELDLQALSRHPAFLSISA
>gi|319764298|ref|YP_004128235.1| response regulator receiver [Alicycliphilus denitrificans BC]
MPIRKVLVVDDSKTELMYLTDLLQKKGMQVRTAENAEEAFRRLTEEKPDLILMDVVMPGQNGFQLTRTIT
RNPEYADVPIIMCTSKSQETDRVWGMRQGARGYITKPVDPAELQAKIDALN
>gi|319764299|ref|YP_004128236.1| response regulator receiver [Alicycliphilus denitrificans BC]
MATTTTGSTFKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYRPQLIFCDILMPKLDGYQ
TCAIIKRNARFADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNAQQGAM
>gi|319764300|ref|YP_004128237.1| rubredoxin-type fe(cys)4 protein [Alicycliphilus denitrificans BC]
MCLICGWVYDEAAGSPEHGIAPDTRWADVPENWTCPECGARKEDFEMVEI
>gi|319764301|ref|YP_004128238.1| phosphomethylpyrimidine kinase type-1 [Alicycliphilus denitrificans BC]
MAADDDDTVAPTICVMVFNANDPSGAGGLAGDVAAVASVGGHPVPVVTGAYARDSAEVFDHYPFDDDMVS
EQARAVLEDMAVQAIKVGFVGSPENLSAIAGIATDYADIPVIAYMPDLSWWRDDLIDQYHDAFRELLLPQ
ASVLVGNHSTLWRWLLPDWSSERAPSPRDLAMAASESGVPYLLVTGIPAADQHIDNVLTSAQSVLGSGRF
ERFEASFIGAGDTLSATLAALVASGCDLGEATKEALTYLDGALEHGFRPGMGHVLPDRMFWAQPDDEDDN
DDEPSGGPQGFDMPPHDTQH
>gi|319764302|ref|YP_004128239.1| glutamate-1-semialdehyde-2,1-aminomutase [Alicycliphilus denitrificans BC]
MTHSTDSNQTLFERAKALIPGGVNSPVRAFRAVGGTPRFIQRAQGAYMWDADGRRYIDYIGSWGPMILGH
GHPAVLEAVQKAAVDGFSFGAPTEREVELAEEIIRHVPSMEMIRLVSSGTEAGMSAIRLARGATGRAKII
KFNGCYHGHADSLLVKAGSGLATFGHATSAGVPPEVVQHTLVLEYNDVAQLEEAFALHGKDVACVIMEPI
AGNMNFVRASVPFMRRARELCTQHGALLVIDEVMTGFRVALGGAQSLYAQQIPGFRPDLTVLGKVIGGGM
PLAAFGGPRAVMEQLAPLGPVYQAGTLSGNPVATACGLATLREIARPGFYEALAARTRALTDGLAGAAQA
AGVDFCADSEGGMFGFFLLPRLPQNYPEVLTTDGARFNRLFHGLLDGGVYIAPALYEAGFVSAAHSAQDV
ADTVALAREVFGKL
>gi|319764303|ref|YP_004128240.1| phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase [Alicycliphilus denitrificans BC]
MNALISVSDKTGIVEFARALHALGIRLLSTGGTAQLLAKEGLPVTEVAEVTQFPEMLDGRVKTLHPKVHG
GLLARRDVPAHMAALKEHGIDTIDLLVVNLYPFEATVAKAGCTLADAIENIDIGGPAMVRSAAKNWQDVG
VVTSADQYEAVLAELKAGGRLSDKLRFALSVAAFNRIAQYDGAISDYLSSVKFEEEKLSEAYVPERSLFP
GQSNGHFVKVQDLRYGENSHQQAAWYRDLHPAPGSIAAGVQLQGKELSYNNIADADAAWECVKSFKLPAC
VIVKHANPCGVAVGTNALEAYGKAFQTDPTSAFGGIIALNRAVDGAAAQQISKQFVEVLMAPDFTPEALD
VFKAKANVRLMKIALPPGGDTAWKQGRNAMDAKRVGSGLLLQTADNHELELPDVKVVTIKQPTQEEMQDL
MFAWKVAKYVKSNAIVFCKGGMTMGVGAGQMSRLDSARIASIKAQAAGLSLKNTVVASDAFFPFRDGLDV
VVDAGATCVAQPGGSMRDQEVIDAANERGVAMVFTGVRHFRH
>gi|319764304|ref|YP_004128241.1| helix-turn-helix fis-type [Alicycliphilus denitrificans BC]
MSRNNSIEQCVRESLQSYFRDLDGEAPDGVYDMVVRLVEKPLLEVVMSHADNNQSRAAEWLGLNRNTLRK
KLVEHKLL
>gi|319764305|ref|YP_004128242.1| tim-barrel protein, nifr3 family [Alicycliphilus denitrificans BC]
MHIGHIPLANRLFVAPMAGVTDRPFRQLCKRLGAGYAVSEMVTSRKDLWASLKTSRRANHEGEPGPIAVQ
IAGTDAAMMAEAAVYNIDRGAQIIDINMGCPAKKVCNKWAGSALMQNEALAVQIAEAVVAACAPRGVPVT
LKMRTGWCQRHRNAVQLARAFEGVGVQMLTVHGRTREQGYKGQAEYDTIAAVKAQVAVPVVANGDITSPE
KACAVLAHTGADAVMIGRAAQGRPWIFREIGHYLATGEHLAPPLVAEVRRLLLEHLQDHYGLYGQASGVR
SARKHIAWYVRDLPGGEAFRQHINTIEDCAAQWQAVAGFFDALGERMDRLPPARDDADPQQRERMHEQEQ
QH
>gi|319764306|ref|YP_004128243.1| hypothetical protein Alide_3640 [Alicycliphilus denitrificans BC]
MQQLLDLLALPQFGLSTVFLVAFVSATLLPMGSEPAVFGLVKLNPDLFWPAVLVATAGNALGGAVSWWMG
LGAHRAWDAARRRRRAGQIAAPDAKPPRALSRTERRARVWLRRWGAKTCLLSWLPVVGDPLCAVAGWLRL
PFWPCLMYMAIGKFFRYLVMTAGLLYLVG
>gi|319764307|ref|YP_004128244.1| regulatory protein lysr [Alicycliphilus denitrificans BC]
MRESEHFPEGRVLFSRLARQVRLRQLQLLLALQQCGSIGKAAAHLDMSQSAATQALAELERVLGMRLFER
HARGIRPTQAGQALADAARGVMSELEDVSETLAALRLGASAALRLGAIPAAAHSILAPLLARFYALRPQV
HVDVQEGEGARLLPLLIGGGLDAVFCRRPALLPESLVFAPLLPDEAVFIAARGHPLAGARQVPLERLADA
RWVLPTSNIAVRDIFERVVLARLPQAQWFPVSTVSLPVLEGLLSQPGAVAVMPRSIVPRLGHAGPRAGVC
ILDMVLPEHEALALAPLGAVYRGEATPALLLEMLALWRATQGAA
>gi|319764308|ref|YP_004128245.1| hypothetical protein Alide_3642 [Alicycliphilus denitrificans BC]
MRTTHARRPSLKALAVATLAATAALVLPQGAQAADAYPGKPIKLIVPFAAGGSTDIVARVLAEGMRTTLG
QPIVVDNKAGAGGLIGTEAVAQAAPDGYTVGMATVSTMTINPLLYTRAAGLGAKLAPVANLVTMPSVYTV
HPSLGVNSFDAFVAKVKAQPRKISGAVPGPGTLGHLMLASFNETLKTDILIVPYRGSGPALNDALAGMVQ
VMPDQLPSSMAHIKSGKLIPVVLAADARSPELPNVPTFKELGYDELNELGISWFGIVVPKNTPAPIVKRL
QDAAVKAAHLPDVQQHLKNLGASATDMDQSRFPAQIAQELKRNKALLDKAGVKPE
>gi|319764309|ref|YP_004128246.1| amidohydrolase [Alicycliphilus denitrificans BC]
MELLQDFFARETPRMTALADRIWSLAELRYAETASARLHMDALAGSGFRITRDVAGIPTAFMAEWGDEGP
VIAFLGEYDALSGLNQQSGALVCTPSVDSPGLAGHGCGHHLLGASAHFAAIALQAHLQASGQQARVRYYG
CPAEEGGSGKTFMARAGVFDDVDAALTWHPASFTGVFSQSTLANIQAKFIFHGKASHAAHSPHLGRSALD
AVELMNVGVNYLREHMPPDARVHYAVTDSGGMSPNVVQARAEVLYLVRAARNHEAAELYERVQNVARGAA
LMTGCRVEILFDKACSNLLQNTTLNKVLHARLLAEGALAVDAGTQSKAADFQATLSADEIDAVSRPLASV
LRGKVPAVFEGVAPYDPDANDILFGSTDVADVSWITPTAQAWVACYAFGTPMHSWQMVSQGQSALAHAGM
VRAARVLATTAIELVRRPGLIAQAKAELLQRRQGKPYECPIPADVPLPFLRPQDSQANQNR
>gi|319764310|ref|YP_004128247.1| hypothetical protein Alide_3644 [Alicycliphilus denitrificans BC]
MDLLNHLSLGFSVAFTMQNLLYAFLGCLLGTLIGVLPGLGPVATIAMLLPTTYALPPTAALIMLAGIYYG
AQYGGSTTAILVNLPGESSSVVTVIDGYQMARKGRAGPALAAAALGSFFAGCVGTLVIAAFAPPLTEVAF
KFGPAEYFSLMVLGLIGAVVMASGSLLKAITMILVGLAFGLVGTDVNSGVARYSFDIPELTDGISFVAIA
MGIFGYGEIIANLSVPSEKREVFTDKVSGLMPTKEDFRRMFPAVLRGTAIGSALGILPGGGALLSAFAAY
TIEKKSKIKPGEVPFGQGNIRGVAGPESANNAGSQTSFIPLLTLGIPPNAVMALMVGAMTIHNIQPGPQV
MTSNPELFWGLIASMWIGNLMLVVLNLPMIGLWIKLLSIPYKWLFPAIVLFCAIGVYSENNNTFEIWMVA
IFGVVGYVFHKLGCEPAPLLLGLILGPMMEENLRRALLLSRGDWGVLVTRPLSASLLAVAAVLLVIVLLP
SVSRKREEAFVED
>gi|319764311|ref|YP_004128248.1| hypothetical protein Alide_3645 [Alicycliphilus denitrificans BC]
MKIQSQRDFAAGALFCAFGVAFAWGAATYNVGSGARMGPGYFPLIVGLLIALLGAVITARSLIVHTEDGD
PIGAIAWRPLLFIIGANLLFGVLLGGLPALGLPPMGLIVAVYALTLVSSLAGDQFNLKSVLILATVLAVG
SYVAFVWALNLQFPVWPTFIAG
>gi|319764312|ref|YP_004128249.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MSAGRPWQSAGLRLAALSGFLVLVAMLAALALVYMQVSALLHASMARQLAQAQQRLATQYAQEGPEAAAL
AIAGMLRDGRDTDTELVLLTTPQGAFLAGNLGIDALPDALLRQPAASPGRVVLEGSGIAAQVAVHRLPDG
ALLVLGYDLRELSGVESMVASASVVAGLFALALALASAWFFRRELGRSVDALHRTITRIAGGQLHERVPV
QAQAGDEFARIEQDFNHMLDRIGQLMAGVRHVSDDIAHNLRTPLTRLRLRLQAAHDGAGGAAELRAALGS
ALHDIDDLGRVLDKLLSIAQAESGTRRAPFAPVAWCDVAAEVAELYEDLAEHEGVALAWEGGPAAPVLGD
RALLAGALVNVVDNAIKYAGRGARVRMWTRECAGGSEAVVEDDGPAAPPPEALDTLGRRFVRLRPDLPGH
GLGLASVQAVMRLHGGEMRLESVAPGLRVVLRLPLHDGRA
>gi|319764313|ref|YP_004128250.1| transcriptional regulator domain-containing protein [Alicycliphilus denitrificans BC]
MWRCLVIEDDLENARYIADGLRAQGHVAVIAAEPGEALRRATAEDWDVVVLDRMLGPRVDGLNILQTMRG
LGLRTPVLVLSALSALDERVRGLKAGGDDYLGKPFAFSELAARIEALVRRSRAGEEARLLQMADLRLDLV
SRQARRGARPIALKPREFRLLAYLMMHPEQVLTRTMLLEAVWDYRFDPQTNLIDVQVSRLRQKVQAPGEA
PLIHTVRGVGYRLGLRPEGA
>gi|319764314|ref|YP_004128251.1| gtp-binding protein ychf [Alicycliphilus denitrificans BC]
MSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLAQLAEIVKPERTVPAIVEF
VDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDPNVVHVAGRVDPIADIEVIQTELCLADLATV
EKALNRYSKAAKSGNDKEAAKLVSLLTPLQAALDQGKPARSVPVSKEDAPLLKQFCLITAKPAMFVGNVA
EDGFENNPLLDKLKEYAAAQNAPVVAICAKIEAEMAEMSDEDRDMFLQEMGLEEPGLNRLIRAGYDLLGL
QTYFTAGVKEVRAWTIHKGDTAPQAAGVIHGDFERGFIRAQTIAFDDFVQYKGEQGAKDAGKMRAEGKEY
VVRDGDVMNFLFNV
>gi|319764315|ref|YP_004128252.1| ubiquinone biosynthesis hydroxylase, ubih/ubif/visc/coq6 family [Alicycliphilus denitrificans BC]
MAQTFDVCIRGAGVVGRTLALLLARERMRVALVAPPAGTQPAAADVRAYALNAASRALLESVRGWPDAQH
ATAVLQMQVQADQDGMVRFDAAQQGCDALTWIVDVPALEARLADAVRFQPLVEQVTEPVAAPLTVVCEGR
ASSTRVEFGVEFDVTPYAQDAIATRLACERPHGQVARQWFAPDGSILAFLPLDGAQGNSVAVVWSVPQEQ
AAHWLQAGEEDFTQRLREISRDNLGALRQTAPRASWPLQQARARHWCGALPGRGGMSWALAGDAAHNVHP
LAGQGLNLGLGDARTLARVLHERAAWRGVGDLRVLRSYERERKAALLPMGMAMDGLQQLFTRREGALAAL
RNWGMKGFEHSGPLKAWVARRAMGTD
>gi|319764316|ref|YP_004128253.1| disulfide bond isomerase, dsbc/g-like protein [Alicycliphilus denitrificans BC]
MKLLPSLLAAATLCLGLNASAQEAAIRKTLAERIPQLQQIDEVRTTPMKGLYEVRIGTDLFYTDAQGNYL
IQGELIDTKARRNLTEDRLNKLTAVDFKALPLQDAFTIVHGKGERKLAVFEDPNCGYCKRFERDMQNVDN
VTIYLFLYPILSPDSAEKSRNIWCAKDRAAAWQDHMLRDKTPTAASCDTAALQRNLAFGRKHKITGTPTL
IFADGSRVPGAIGAQDVEKRLASAAAADK
>gi|319764317|ref|YP_004128254.1| peptidase m61 domain protein [Alicycliphilus denitrificans BC]
MPPSLPAIHYRIDPGECRAHLYRVTLTVAAPAGRQELSLPVWIPGSYLVREFSKNLQSLRACQGGAEVPL
AQLDKHRWVAQCRPDEPLVLSYAVAAYDNSVRTAWLDATRGFFNATSLCLRVHGQEDAPHGLEVVRSPEL
AGWALATGLAPTQVDASGFGSYTARDYDELADCPVEMGPLWTASFSACGVPHRLVVAGAAPSFDGERLVR
DMQRICEEAIRFWHGAGQPPFDGYLFMLNAVNDGYGGLEHRNSTALICSRRDLPRLGQSDKDLRASEGYT
TLLGLVSHEYFHAWNVKRLRPAEFARYDYARENYTELLWFFEGFTSYYDDLLLRRAGLIDHAGYLKLLTK
AINQVLQTPGRLVQSVAQASFDAWIKYYRQDENTPNATVSYYTKGALVALCLDLALRREGRATLDDAMRA
LWQRTGGGPMAEADVLAVLQELSGRDWSGEITQWAHGTTDLPLAELLAAHGITLQADPAQTAQRLGLRVA
ENGGIQVKTVLRGGAAEAAGFMAGDEWLALEAQGQAWRLLKLDELLLYAGSATEVTALVARDRRLLRLPL
ALPAAGAAADTVRLDVQDAAAAQRWLGAAASPA
>gi|319764318|ref|YP_004128255.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MAYECIEVRTEADKVGIITLNRPKQLNALNDQLMDELGAALKAFDADEKIGCIVLTGSEKAFAAGADIGA
MAKYSFADAYKGDYITRNWEAIRSIRKPVIAAVAGYALGGGCELAMMCDFIIAADNARFGQPEIKLGVIP
GAGGTQRLPRAVGKAKAMDMTLTARMMDAAEAERAGLVSRVVPQDKLMEEALGAAIVISGFSQIAVMAAK
ESVNRAFEGTLSDGVMFERRLFHSLFATQDQKEGMDAFVNKRAPNFTHQ
>gi|319764319|ref|YP_004128256.1| hypothetical protein Alide_3653 [Alicycliphilus denitrificans BC]
MTRCTPLSALALAAALALPLAAGAQQAPTPAGQRPFPPAALRGSLKIVNTAEAELNGKAIRLAPGLRIFN
PQNALVFAHSLAGQSVKVNYVTEASTGMLLTAWILTEAEARQPRKGDDAIITNIRTEPAATPR
>gi|319764320|ref|YP_004128257.1| tRNA-i(6)a37 thiotransferase enzyme miab [Alicycliphilus denitrificans BC]
MSKKVFIKTFGCQMNEYDSAKMADVLGAAQDYQSTDNPEEADLILFNTCSVREKAQEKVFSDLGRVKHLK
EKGVLIGVGGCVASQEGEEIIKRAPFVDVVFGPQTLHRLPELLSAREKQHKPQVDISFPEIEKFDHLPPA
RVEGASAFVSIMEGCSKYCSYCVVPYTRGEEVSRPFEDVLVEVAGLADQGVKEVTLLGQNVNAYLGTMGD
TAEKADFALLLEYVAEIPGIERIRYTTSHPNEFTPRLIEAYARIPKLVSHLHLPVQHGSDRILMAMKRGY
TAMEYKSTVRKLKAIRPGMAMSSDFIVGFPGETEEDFQKMMKLIHDVRFDNSFSFIFSPRPGTPAANLHD
DTPHDVKLRRLQELQAVINRNILEISQERVGTVQRLLVEGVSKRDAGELMGRTECNRVVNFPGRERLIGQ
MIDVRITEARTYTLRGEVATSESAELLSV
>gi|319764321|ref|YP_004128258.1| signal recognition particle protein [Alicycliphilus denitrificans BC]
MASALTEKLTRLVKEMRGQARITESNVQDMLREVRMALLEADVALPVVRDFIARVKEKALGQEVLGSLKP
GQALVGIVNQELAATMGEGVADINLAAQPPAVILMAGLQGAGKTTTTAKLAKHLIEKRKKKVLTVSGDVY
RPAAIEQLKTVTKQAGAEWFPSSPDQKPRDIALAALDYARKHYFDVLLVDTAGRLAIDELLMQEIKDLHA
VLNPVETLFVVDAMQGQDAVNTAKAFKEALPLTGIVLTKLDGDSRGGAALSVRAITGAPIKFAGVSEKID
GLEVFDAQRHAGRVLGMGDIVALVEQVTAGVDLEAAQKLAAKVKSGDGFDLNDFLAQLQQMKQMGGLSSL
MDKLPAQLTAKAGQVDMDKAERDIRRKEGIICSMTAQERRRPELIKATRKKRIAAGAGVQVQEVNRLLNE
FEQMQGMMKKMQGGGLMKLMKKMGGMKGGLPGMGGMPRF
>gi|319764322|ref|YP_004128259.1| cytochrome c assembly protein [Alicycliphilus denitrificans BC]
MILPSASPLAWLLALATAVAYALAAAVASRAKAEHGHLAMAPAWTLHAAALAWGLLGSTPHFGFAAALSM
TAWLVLTTYAVERQLFPQMRTRWALCALGGVSVLLAALFPGRPLHVSASPWLPLHLTLGIACYGLFAAAV
VHAGLMGRAERQIRLAADSNSGMPLLTLERLTFRFVSAGFVLLSATLVAGWLFSEQLYGRAWLWDHKAVF
SVLAWITFAVLLLGRSRFGWRGRSAVRVLYAGAALLLLAYVGSRFVLEVVLRRAI
>gi|319764323|ref|YP_004128260.1| hypothetical protein Alide_3657 [Alicycliphilus denitrificans BC]
MKYLVVLAVIAVVYALWRSQRRPPPRQGGTPRSRIAPPQNMVRCAHCGVHLPQGDALWADGRSYCCRAHQ
EQGPA
>gi|319764324|ref|YP_004128261.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MPTSTVTEQPPGRPPFQRLWKAFLTARVMVAQALLLLQLLGMVLNQAIEPALLATSFGYLIAATLLRVFG
AGTPPDPRPGIQWLPSIGVDIALVGLLQVLQQSGSMNFTPLFGLPILMAGVLGTLTLALGTTAGVTLLLL
AWAWWLGSQGGGDATQRYLQTAVTGTGYFLVAYLVHLLAARLTSEQQMARRSQMDARTQTAVSALVMQHV
ADGVLVLDHQGQVRLANPAALLLLGPAAKTSTPFALEHTPAWKPLMDLARQTFRQEQPQHADVNILHEGQ
SPMGLRIRTWLTRAQPASGASDEEPLCVMFLHDLREMEARLRTEKLAAMGRMSAAVAHEIRNPLAAIVQA
NELLDEDLSDPGHKRLAHMVRQNAERLVRISEDVLDIARVQHQIGHAPSSTLALDATVLQAWNDWQAHDP
ARRQGCLELNAGTAQVEFDAEHLRRVLMNLLDNALRYMGQEPDSLCLSTSATAAGQVKLQVWSDGAPLDK
SVERHLFEPFFSSESRSSGLGLYICRQLCQRHGAAIAYQRANRALAHGTVAGNAFSVTFRSTTRPAESSS
LFDTIVV
>gi|319764325|ref|YP_004128262.1| sigma-54 factor interaction domain-containing protein [Alicycliphilus denitrificans BC]
MNATASAASILVVDDEPDLRTLYELTLLREGYRVETAASVAEAREQLQRRKFDAVITDMRLPDGLGLDLL
YDLREQQRRERCVVMTAYGSAENAVEALRSGAFDYLTKPVDLKQFRSVVASAIQGTGGVLPAATPPRMAA
QEPDADNPVLARLIGESEAMRNVKQRIAKVARSMAPVLIRGESGTGKELVARALHASSQRADGPLVAVNC
GAIPENLLEAEFFGARKGSYTGSTSDREGYFQAARGGTLFLDEIGDLPLPMQSKLLRAIQERSIRPLGST
QEETVDVRIVSATHRDLAADVQAGRFRQDLYYRLNVIELLIPPLRERREDLPALCEALLARIEQESGTPV
PRLGAAALKRITQHPLTGNVRELENLLHRAVALSDGNELQVEHPAATTAEVAAAVPAPPPPTPPEAGTPP
APPPTAASEEPPLPSDLQAWLDQHEREILVRALRETGFNRTATAARLGISLRQIRYRIDRLNIAMPQDGD
NHGEAQ
>gi|319764326|ref|YP_004128263.1| n-acetylmuramoyl-l-alanine amidase family 2 [Alicycliphilus denitrificans BC]
MAKRSRPGTPWQGGWYLPARRMHSPNHGPRPAGAVIDLIVVHSISLPPGQYGGTAVQQLFTNRLDWDAHP
YFQSIRGLEVSAHFFIARDGRLWQFVDADRRAWHAGRSHYRGRDACNDDSIGVELEGLEGQAFEEPQYRS
LTRLCAALARRYPIGYIAGHEHIAPHRKNDPGPGFEWQRLRSAFAGSGILFPP
>gi|319764327|ref|YP_004128264.1| ribonucleoside-diphosphate reductase, alpha subunit [Alicycliphilus denitrificans BC]
MQVSSVHANTAPSTQPHAADAPATDASGGVFSHYQIIRRNGAVVPFEPQKIAVAMMKAFLAVHGTQGAAS
ASVREVVDELTQAVVRALMRSRPSGGTFHIEDVQDQVELGLMRGSHHEVARAYVLYRERRAQERAQKKEQ
LLPQMPALYVLDKGQRIELDILRLQALIESACANLGSDVQAAPIAAETLRNLYDGVPMDEVYKASILAAR
TLIEKDPGYTYATARLLLHTIVREVLGQDVAPAGMAAAYAANFPQFIRKGVDNELLDPRLLDFDLQRLGQ
ALKAGRDLQFDYLGLQTLYDRYFLHVKKTRIELPQAFFMRVAMGLALREGDPKTTGSARAIEFYELLSSF
DFMSSTPTLFNSGTLRSQLSSCYLTTVPDELGGIYESIKENALLSKFAGGLGNDWTRVRALGARIKGTNG
ESQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLESWHLDVEEFLELRKNTGDDRRRTHDMNTANWIPDLF
MKRVMDKGQWTLFSPSDVPDLHDLYGQAFERAYTAYEAKVDSGELQLFKRVPAVDLWRKMLSMLFETGHP
WITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTSDTETAVCNLGSVNLARHLKDGAIDHDKLRKTVSTAM
RMLDNVIDINYYAVDKARDSNLRHRPVGLGLMGFQDALYELRIPYSSDAAVTFADESMEAICYYAYWAST
ELARERGTYSSYEGSLWSKGILPLDSLELLAKERGGYVEVDRTTRLDWDALRSKITQDGMRNSNCIAIAP
TATISNIVGVDASIEPSFGNLSVKSNLSGEFTVINQYLVRDLKKLGLWDDVMLMDLKHFKGSLHAIDRVP
QNVKALYATAFEVAPAWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDETYKLAWVRGLKTTYYLRTQSA
THVEMSTVNTRQLNAVSAGTDSQSGALNAAAAAAQTQAGALPATDVKFCAIDDPSCEACQ
>gi|319764328|ref|YP_004128265.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans BC]
MLTWDDEVKPSSQKLMDGSRAIGRPVEPPPTALDTPALQPVESTAARTPAAAPAAAQHRRVSAVDKRIIN
GQTDVNQLVPFKYKWAWEKYLATCANHWMPQEINMTRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLA
ANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYNEVESIRAKDEFLIPFI
EAIMDPAFKTGTPENDQTLLKSLIVFACLMEGLFFYVGFTQILALGRQNKMTGAAEQYQYILRDESMHCN
FGIDLINQLKLENPQLWTPAFKDEIKGLFLKAVDLEYRYAEDTMPRGVLGMNASMFKGYLRYIANRRATQ
IGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWD
>gi|319764329|ref|YP_004128266.1| histone protein [Alicycliphilus denitrificans BC]
MATAKKPAAKKAAPAKKAAPAKKAAAPAKKAVAAKKAAPAKKAAAPAKKAAPAKKAVVAKKAAPAKKAAA
PAKKAAPAKKAVVAKKAAPAKKVAAPAKKAAPAKKAVAAKKAAPAKKAAAPAKKATPAKKAAVPAAKKAA
AAKKAPAAKKAAPKAPAAAPAPAAQTTLNPQAAWPFPTGGKP
>gi|319764330|ref|YP_004128267.1| pfkb domain protein [Alicycliphilus denitrificans BC]
MAALICGSLAFDTIMTFEGRFAEQILPEQLHILNVSFLVPTLRRDFGGCAGNIAYGLKLLGGDPRPMAML
GADGGEYLARLQQLGIDTRFIGQAGDTYTAQAMIMTDRDNNQITAFHPGAMMQAHRNRIPQDAGVQVGII
APDGREAMLQHAAEFVAAGIPFVFDPGQGLPMFNGDELRRFIEQASWIAVNDYEGKMLCDRTGWTLAEMS
RQVRGLVVTLGAEGCEVWEQGARTEVAPVKPAQVVDPTGCGDAWRGGLLHGLEKGWPLVRCAQLGNRLGA
LKIAQRGPQNYTLDFTPD
>gi|319764331|ref|YP_004128268.1| mj0042 family finger-like protein [Alicycliphilus denitrificans BC]
MSQITRCPFCATTFKVVADQLRISDGWVRCGQCKEVFDASEHLLQPEPAQLLPEMPLDDPGLPDRHAADA
PQPQDKPVTTSGGSEEVAPLSSLLRREAVAEEPEAMPEAAIQGYELPGATVDDSAWPQEPDAGVEAAEQG
DDQQEAEPAPDTLDAEPPPDEEAQAAAPPESEPLEPLQPLEQESVLVEGTAIMPGAAHESDAPEETAASP
VAEPGFVTAARRSAFWRRPAVRGALAVAVLALLLALGLQVVVQERDAIAARSPAAHALMERLCAPLQCTL
QAPQRIASVVIDSSSFLKERNDAAAYQLQMSLKNISSLSVAMPALELTLTDVRDRAVLRRVLLRNDLGAP
AELAPGSTWSATVSMQVAQGADQVAGYRLLAFYP
>gi|319764332|ref|YP_004128269.1| ribosomal protein l11 methyltransferase [Alicycliphilus denitrificans BC]
MFELSLLCPEGRVETLSDAFDALEALSVSVEDADAQTDAEQALFGEPGMPAPREGWQRSRITALFPTRQA
ADEAVRLLQAQDFFEGCSVLGIATVQEQDWVRLTQSQFEPVEITPDFWIVPTWHELPAVARRSIRLDPGL
AFGTGTHPTTRMCLRWIARQGVENGAKALGRVLDYGCGSGILAIGAAKFGALDIDAVDIDPAAVEATRQN
ALANGVYLNAGLPEQAQGQYQTVLANILATPLKVLAPLLCAHVAEGGHLVLAGILERQAQELTQAYAPWL
SLQVADSEDGWILMTARR
>gi|319764333|ref|YP_004128270.1| acetyl-CoA carboxylase, biotin carboxylase [Alicycliphilus denitrificans BC]
MFKKILVANRGEIALRIQRACHELGIKAVMVYSEADRDAKYVKLAEEAVCIGPAPSPLSYLNMPAIISAA
EVTDAEAIHPGYGFLSENADFAERVEKSGFQFIGPTPESIRMMGDKVSAKQAMIRAGVPCVPGSDGELPD
DPVQIRRIAKTIGYPVIIKAAGGGGGRGMRVVHTEAALVNAVQMTKAEAQAAFGNPAVYMEKFLQNPRHI
EIQVLADKYRNAVYLGERDCSMQRRHQKVIEEAPAPGIPRKLIEKIGERCVAACKKIGYRGAGTFEFLYE
NGEFYFIEMNTRVQVEHPVTEWITGVDIVRTQIMVAAGEKLPFTQRQIQIHGHAIECRVNAEDPYKFIPS
PGRITMWHAPGGPGVRVDSHAYTNYYVPPNYDSMIGKIIVHGDTREQALARMRTALSETVIEGINTNIAL
HRELLVDANFVAGGTNIHYLEEWLAQRKR
>gi|319764334|ref|YP_004128271.1| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Alicycliphilus denitrificans BC]
MDLRKLKTLIDLVSESNVSELEITEAEGKVRIVKSSGAVVQQFVAAPVQAAPAAAAPAAAAPVAELPAPA
AAAPTGHVVKSPMVGTFYRASSPGAKPFVEVGSQVKEGETICIIEAMKILNEIEADKSGTVTRILGENGQ
AVEYGQPLFVIE
>gi|319764335|ref|YP_004128272.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen [Alicycliphilus denitrificans BC]
MNHPSENPTPETSQASASAARRRWLLLGVGAVAGLGGAGLAAWRLRPGAVKEGAHETLWDASFEDLGGQP
LRMASMRGRPLLLNFWATWCPPCVQELPLLNAFYGEHRAKGWQVLGLAIDQPANVQKFLQRVPLDFPVAL
GGLGGTELSRSLGNDKGGLPFTVMFAADGSISKRKIGQLTAQDLQNWSKSL
>gi|319764336|ref|YP_004128273.1| hypothetical protein Alide_3670 [Alicycliphilus denitrificans BC]
MENALATEIANAAARLVVEEGLEWGPAKRRAVRQLGLPARTPLPDNDLVEDAVREYIGLFCADTQPLELR
ALRELALVWMQRMQAFRPYLGGAVWHGTATRLSDIYIALFCDDPKSAEIALIDHHVDYEPGSMTGLRGEL
IDVLSMSCRSAALNEEIGVHLLIYDLDDLRGALRLDSRGRAPRGDMGAVRRLLQPMPSSSVPIP
>gi|319764337|ref|YP_004128274.1| udp-n-acetylmuramate [Alicycliphilus denitrificans BC]
MHIHILGICGTFMGGLAALAREAGHRVTGCDAGVYPPMSDQLRALGIDLIEGYGAEQLALEPDMFVVGNV
VSRARLPDGSPKFPLMEAILDAGAPYTSGPQWLAEQVLAGRHVLAVAGTHGKTTTTSMLAWILECAGLAP
GFLVGGVPMNFGISARLGALAAGQARPLFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFDD
LGQIERQFHHLVRTVPPSGRVVVNGLEESLARVLHAGCWSGVASFGAAVSDFCARGEPHDFEVLQRGQAV
ARVQWALTGVHNQLNALAAIAAAEHVGVAPAQAAQALARFENVRRRMELRGTARGISVYDDFAHHPTALR
TTLDGLRRRVGGEARILAVFEPRSNTMKLGTMKSQLPWALEQADLAFCHTAGLDWDAAEALAPMGARART
AADIPTLVAQVSTAAQPGDHILCMSNGSFGGVHAKLLEELSKK
>gi|319764338|ref|YP_004128275.1| hypothetical protein Alide_3672 [Alicycliphilus denitrificans BC]
MHGEVLVTLSPGQEFHLSTQDAQPLTHEEARRWLDDEFMRLECEPLRASGKVLLADKVLTVASAAGARLL
ADPAWSAQFARAAVAALARPMVRVDVQAMAVTF
>gi|319764339|ref|YP_004128276.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Alicycliphilus denitrificans BC]
MTATVSSSDAWYRNVDKTSQTDDQRIEDITVLPPPEHLIRFFPIRGTEVESLISSTRRSIQRIMNGEDDR
LLVIIGPCSIHNPVAALEYAQRLKVVREQYKDQLEVVMRVYFEKPRTTVGWKGLINDPYLDGSYRIDEGL
RIARQLLIDINRLGVPAASEFLDVISPQYIGDLISWGAIGARTTESQVHRELASGISAPIGFKNGTDGNI
RIATDAIQSASRGHHFLSVHKNGQVAIVRTSGNKDCHVILRGGKAPNYDAASVAAACADLEKAGLPATLM
VDCSHANSNKQHERQRDVARDIAAQIAGGSRSVFGVMIEGHLQPGAQKFTPGKDDPAALEYGKSITDACL
GWDDSVACLAELASAVQARRAR
>gi|319764340|ref|YP_004128277.1| peptidase u62 modulator of DNA gyrase [Alicycliphilus denitrificans BC]
MISREPTIERLAVARELLLAPFGLDESHLSRALAEIRAHQVDDADLYFQYTRSEGWSLEEGIVKTGSFSI
DQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISATAQSGRARVASKKIAKSRSLYPHIDPIASMD
STAKVQLLERAEQRARAKDPRVAQVMAGLASEYDVVLVARADGTLAADVRPLVRMSVTVIAEQGGRREVG
SSGGGGRFGLAYFSDEQIAQYVDEAVNAALVNLESRPAPAGEMTVVLGPGWPGVLLHEAVGHGLEGDFNR
KGSSAFSGRIGQRVAAKGVTVLDDGTLADRRGSLNVDDEGHATQRNVLIEDGILKGYIQDAMNARLMKVA
PTGNGRRESYAHIPMPRMTNTYMLGGDKDPQEIVASIKRGLYATNFGGGQVDITSGKFVFSASEAYWVED
GKILYPVKGATIVGSGPESLKKVSMIGNDMALDSGVGTCGKEGQSVPVGVGQPTLRIDGITVGGTA
>gi|319764341|ref|YP_004128278.1| rod shape-determining protein roda [Alicycliphilus denitrificans BC]
MPAVFDKPSLPQRIWPLFSGFDWPLIALLLVLSSIGLVAMYSSGYDHGTRFADHGRNMLLAAGILFVVAQ
IPPQRLMALAVPLYLLGVALLVAVALFGITKKGAQRWINVGVVIQPSELMKIAMPLMLAWWFQKREGQLR
ALDFVVAGVLLMIPVGLIMKQPDLGTSLLVMAAGLSVIFFAGLPWKLVAPPVLLGVAGIALVVWFEPQLC
ADGVRWPVLHDYQQQRICTLLDPSRDPLGKGFHIIQGMIAIGSGGVWGKGFMAGTQTHLEFIPERTTDFI
FAAFSEEFGLAGNLLLIVCFVLLVWRGLAIAAGAGTLFGRLMAGAVAMIFFTYAFVNMGMVSGILPVVGV
PLPFVSYGGTAMTTLGLALGVLMSVARSRHQPEREPPESLQTL
>gi|319764342|ref|YP_004128279.1| hypothetical protein Alide_3676 [Alicycliphilus denitrificans BC]
MRATHLLYLHGFRSSPQSAKARLVAGHVASHHPDVFLWCPQLPPSPREAMALVADGIAAWPQGPGMAVIG
SSLGGYYASWVARQARCASVLLNPAVRPERDLARHIGEQTAWHDPEARFFFRPEFIAELQALDVSGQPPA
GPELLIAARGDELLDWREMVERYPQARQMVLEGGDHALSDFPAHLEEALRFCNLA
>gi|319764343|ref|YP_004128280.1| o-antigen polymerase [Alicycliphilus denitrificans BC]
MRPDLAPLAALALALPFVFGFTESPYANFWPLMASGACAWLIAALAWWRAWRADGVGLARCLAAGLLLAA
LAGGAIGLVQFFGGDIGWAPWVHASTPGQAIGNLRQRNQQATLLALGAWALLWWVARLQAYGEGLPAQQP
GVRRLWPLLLAALVPWALVLLAVAGAATASRTGALQWLLILGMLLLWRRSSGALALAVGGLGLLVYLLAA
WGLPQLLLQWTGVRMEGLFLRLADASHPCASRLVLWSNVLQLIALRPWTGWGWGELDYAHYITPFEGERF
CMLLDNAHSLPLQLAVELGLPVALLLCALLLWAVLRARPWRETAAPRQLAWGVLAIVGVHSLLEFPLWYG
PFQLATALAALVLVAPWAAARGARWRPAARALAAAALLAAPVLGLALVRDYGRMSALYRPVADRPEALRA
LAAAELARRVRFFQASAQFAVLTTTAVTPANARQMHDMASRLLHFSPEPRVIEKLIASARLLGLEDEAAL
HADRYRRAYPGDFARWQGGGQASGEPLAQ
>gi|319764344|ref|YP_004128281.1| cytochrome c class i [Alicycliphilus denitrificans BC]
MTRLALLAWACGLPLAAAAAPAALSVPEAARLARGEQVYARCAACHAIEGNRTGPQHCGLFGRRAGTAPG
FDGYSGAMRASGIVWDARTLDLFLKDPPATVPGTAMGYAGVKDDGDRAALIAWLRHATRPGAACTPR
>gi|319764345|ref|YP_004128282.1| hypothetical protein Alide_3679 [Alicycliphilus denitrificans BC]
MNRSPLILPSPALLARRRGLGLAVLSATAVALLGGRDALAAAAKADARQHEADVRILNTALAAEYEAVAA
YQVGAESGLLGSGALPLARQFQGHHKEHAQAIAAAVQKMGGTPVQAKAQYSFPTDKLKAEADVLRFAAGL
ERGAVSAYLGAVPLFADRNLAQVAASILGDEAMHWAVLRQALGEAPVPSAFMS
>gi|319764346|ref|YP_004128283.1| RNA polymerase sigma factor, sigma-70 family [Alicycliphilus denitrificans BC]
MHTPEDLQHAAAPAAGRAEDAALVARALGGEARAFEAIMRRHNRLLFRAARGVVHDDAEAQDMVQETYLR
AFTRLRDFRGEAALGTWLARICVRAAQDVLRRRTRSVAIDATQAPDQEPQPEHAMPYFAPSDDSPDQALA
RAQLRALLESAVQSLPPPYRSVFILRAVQEMSVQETAFCLDISEELVRTRYLRSRAMLRDALGARIEACA
ESAFPFAGARCDQVVHQVLAELRRRGLLA
>gi|319764347|ref|YP_004128284.1| ribonuclease ii [Alicycliphilus denitrificans BC]
MHALFDDAGKFLAGRILSEAESSAQIELDSGKRVKVKAANILLKFDKPAPAELLAQARDVAASIELPLAW
EFAPEDEFGFADLAREYFSANAPVAEQAGMLLALYEAPHYFRRAGKGRFRKAPAEILQQALAAIEKKKQV
QAQIEAWAAELAAGRCPQPIREQLYKILFRPDKNAPEYKAVVEASRTAHQAPLALLQAAGAIDSPYQFHW
KRFLFENFPKGTGFPPLAAPQPPQDLPLAPVQAYSIDDSATTEIDDALSVQGLGTGTVTLGIHIAAPGLA
IQPGGDLDKVGRQRLSTVYMPGYKITMLPDEVVQIYTLDAGRANPAVSLYVTIDEATLAITGTETRLERV
PVTVNLRHDQLDHIVTEAWLQDASVQHENTPQPLLDLREQLSFLHRLAKQLKAGREQVRGKPETFNRPDY
NFRLEGNGKAEPTGSETVRITTRQRGAPLDLIVAEAAIVANSTWGQMLAEHGVPGIYRSQASLAPGIKVR
MGTKALPHAGIGVKSYAWATSPLRRYVDLVNQWQIIACARHGKTAALAAPFKPKDAELFSIISSFDATYG
AYNGYQAGMERFWTLKYLQQNQVAELDATVIKDGMNGDFLVRADTLPLVLPVLGAQGLPRGARVRVKLGA
IDEITLDVNGTLLARLDDPADQSDDGPVDEDEEEAVAGPIAIAVDIDETDGTGTEAGAGQPG
>gi|319764348|ref|YP_004128285.1| tonb family protein [Alicycliphilus denitrificans BC]
MNIASTLRRLSTLQIALGLSIAIHALLLTVRFVDPERFDRVFQDTPLEVILVNAKSGERPDKAQAIAQAS
LAGGGDAAKGRATSPLPYSALTSIGDDLEEAQRRMDQMLEQQTQLLAQVRQQLAILPKPDPRKASEHAEN
QAQEEKRRQLVKLLAEIEKRINEENARPRKRYISPATREEVYAVYYDQLRRKVEDKGTQNFPEQGGKKLY
GELIMIVTVNHDGRVLETEVVQGSGNRQLDRRAEAIARAAGPFGHFGPAMRAKADQIAVVSRFKFTREQI
LETAVR
>gi|319764349|ref|YP_004128286.1| shikimate 5-dehydrogenase [Alicycliphilus denitrificans BC]
MTTTPDLYCVMGNPIAHSRSPWIHARFAALTGQHLRYERRLVPIDGFARALRDFAAEGGRGCNITVPFKL
EAAQLATHRSERVQLAGAANTLSLRDGAIHADNTDGLGLVADIEQGAGVPLAGRDVLLVGAGGAAAGVLG
PLLRRQPRRIAVVNRTAARAQALVASHAALASLQKTELLALDMQAPAADFDIIINATASSLEGAAAPVPA
SVLRPGSLAYDMMYGPAAQGFLDWAAQHGAQPRDGLGMLVEQAAEAFLIWRGLRPPSAQVLAELRAAIAA
GA
>gi|319764350|ref|YP_004128287.1| monofunctional biosynthetic peptidoglycan transglycosylase [Alicycliphilus denitrificans BC]
MRALLRWIALVLLALLALQLFFVARIAAMAVLAPESTSFQRSEAWAQLRQDGGLRWRQQWLPYAQISDHL
KRAVVTSEDDNFVNHDGVDWDAIERAWERNARAEALAAKAPATRAPRIRGGSTITQQLAKNLLLSGERNY
VRKGQEFVLTQLLEQLLSKRRILEIYLNSVEWGTGIFGAEAAAQHYFKKSARQLTAPEAARLAVMLPAPK
RFEKTPNSAYLAGRTRTIVARMGNAELP
>gi|319764351|ref|YP_004128288.1| hemagglutinin-related protein [Alicycliphilus denitrificans BC]
MPTQSLRTMYETAVAELSSAAASRLASGATEEDVARWAVAERNTLKQTYRALTPKPVLARIEAKTLERYG
NKIGPTADDLKAAGKSWKEIIDSATRAGDHDDAFFREG
>gi|319764352|ref|YP_004128289.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MVVQTLVDEHGMSERRACQASGIARSTLRYRAVARDDSGVIAFIQTHMALNPRHGFGLLYDSARHQGKPW
GKTVLWRVYCELRLNLPRRGKKRLPARIKQPLQAAGQPNQGWSCDFMADALWSGRRFRTFNVIDEFNREG
LRIEVDTSLPAARVIRALNELVEVRGAPLSIRLDNGPEFIAHALAQWAQSKGIALNHIQPGKPTQNAYVE
RFNKTYRTEVLDCYVFDSLQEVRDMTADWLHRYNHHRPHEALGRIPPVEYRVKLFPNLYF
>gi|319764353|ref|YP_004128290.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MKKSRFSEAQIVGILKEVEMGAKVGETCRKHGISEPTYYKWKSQFSGMTVSHLAQLRQLQDENAKLKRMY
ADLALMHHALKDVVDRKL
>gi|319764354|ref|YP_004128291.1| crossover junction endodeoxyribonuclease ruvc [Alicycliphilus denitrificans BC]
MRILGIDPGLQTTGFGVVDVDGQRLAYVASGTIRTTGLALGDLPGRLKLLFDGITEVAARYRPDAAAVEI
VFVNVNPQSTLLLGQARGAALTALVNADLPVAEYTALQMKKAVVGHGRAAKSQVQEMVRRLLALPGLPGT
DAADALGLAITHAHAGAAMARVGAVAQLSRRQHAMYKGGRSY
>gi|319764355|ref|YP_004128292.1| helix-turn-helix hxlr type [Alicycliphilus denitrificans BC]
MASASYRQFCPVAMAAEVLCCRWTLLVVRELMMGSSHFNDLRRGVPRMSSALLAKRLRELEAAGIVERTR
AAGAAEGHVYRLTQAGRELRPIVEAVGAWGQRWVKTEATLRHLDANLLMWDIRRHVHPEPAPAARTTIEF
IFCDRPLSERNYWLIVEPACDVDLCTVDPGFEVDLYVSTDLRTLTALWLGHVGWAQASGSGAIRFMGTPE
RQSALRRWLGTSTFAAVPRAVG
>gi|319764356|ref|YP_004128293.1| methyltransferase type 11 [Alicycliphilus denitrificans BC]
MTILEAPAIDYAAIKQRQQAVWSSGDYAVIGATLQIVGENLCEAADLRAGSAVLDVAAGNGNATLAAARR
FARVTSTDYVPALLERGRERAAAERLAIEFRAADAEALPFADASFDAALSTFGVMFAPDQERAAAELVRV
VRPGGRIGLANWTPDGFVGLLLKTVGQHMPPPAGLRPPVRWGTPQGLRELFPGQQVRATPRDFMFRYESP
RHWLEVFRACYGPVHRAFTALAPDRQELLARDILALLERFNRGSARALLVPGAYLEVVITRGA
>gi|319764357|ref|YP_004128294.1| thiamine biosynthesis protein thic [Alicycliphilus denitrificans BC]
MNAPDSFSQLLARTREPFPASAKSFITGSRPDLRVPVRDIRLTNGEVVSVYDTSGPYTDPAATIDVRRGL
QSVRGAWIEERGDSEVYEGRKPVALDDGQRSEDAARLAALRLEAAALQRQPRRAKAGANVTQMHYARRGI
VTPEMEYVALRENGRREWMAQYLQDAAREKRLAGNPLGASIPQVITPEFVRDEVARGRAIIPANINHPEV
EPMAIGRNFLVKINANIGNSAVTSSIEEEVEKLVWAIRWGADNVMDLSTGKNIHTTRDWIVRNSPVPIGT
VPIYQALEKVGGIAEDLTWEIFRDTLVEQAEQGVDYFTIHAGVRLAYIHLTAARRTGIVSRGGSIMAKWC
MAHHKESFLYEHFEDICDIMKQYDVAFSLGDGLRPGCASDANDEAQFAELHTLGELTQVAWKHDVQTMIE
GPGHVPMHMIQANMTEQLKTCHEAPFYTLGPLTIDIAPGYDHIASAIGAAMIGWMGTAMLCYVTPKEHLG
LPDRDDVKQGIIAYKIAAHAADVAKGHPGARARDDALSQARFDFRWQDQFNLGLDPETAQEYHDETLPKD
AAKVAHFCSMCGPKFCSMKITQEVREFAQQGLQEKAAEFNRAGGELYVPIHPVRG
>gi|319764358|ref|YP_004128295.1| hypothetical protein Alide_3692 [Alicycliphilus denitrificans BC]
MLLFRWAVMLLLLVAAVSFAFFAATGQQRYKRFGLVTVKWTVIAAAMFFLVLILERVL
>gi|319764359|ref|YP_004128296.1| udp-3-0-acyl n-acetylglucosamine deacetylase [Alicycliphilus denitrificans BC]
MLQQRTIKTLTRAVGVGLHSGQRVELTLRPAQPDTGIVFRRVDLPEPVDIPITATAVVDTRMASTIGAGG
AKVHTVEHLMSACAGLGLDNLYIDITAEEVPILDGSSASFVFLLQSAGVELQNVPKRFIRVTRPVEVREG
EGHNLKWARLEPYHGFKLRFEIDFAHPAVDSTGQSVEFDLGSGNYARDIARARTFGFTKDVEMLRTSGLA
LGGGLDNAIVMDDYKVLNADGLRYDDEFAKHKILDAMGDLYLVGKPLLAAYSAFRSGHGMNNQLLRALLA
QPDAWEVVSFDNERQAPTGFAQPARAW
>gi|319764360|ref|YP_004128297.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MNSGFPGAQSPARLVAVLRLIAGHHVQGLAINELAQLAGLNRTTARRLLMVLTQSGFAAKDESSGRYRLG
VEAMFTGMSAMTKPPIFEACRPVMERIARRTGHSVFLIVRIGDFAHCLHVEAGDHPLHAHSLMTGQIRLL
GQGTASLALAATLRDRELKQIYERRCLDYEAAGITQDRLWQMVAFTRKLQHSESENLLTTGAVGIGVAIR
VQADHVAAISVATHASRMTDGHKEAVFRVLEEELQTPAIRLFRY
>gi|319764361|ref|YP_004128298.1| hypothetical protein Alide_3695 [Alicycliphilus denitrificans BC]
MSTYRPVHAPHIPPVVGDGRTPRWTRRPPQSNWGDFGPDDQYGRLNYLDAEKVKQAALEIQTGQRFCLSL
PLNLPGGNALNPRRHPPVIKPSTRPQGPGMNFALSQENPNYTDVISDDYAQIYLQYSTQWDALSHVGSHF
DVNGDGIDELVYYNGFQAGIDILAPKDLPGMDGQSRAKALGVERLAEQAIQGRGVLVNLRKHFGDGHTLV
SGSMLKRVLEQDGIEVEKGDIVALYTGFSDALIGCNGQPRADMAETVCAVLDGRDPELQQWIIDSHIASL
VADNYGIESVPGRPVDGSCAFLPLHELCLFKLGMPFGELWYLHELAQWLEQAGRYRFMLTAPALRLPGAV
GSPVTPVATV
>gi|319764362|ref|YP_004128299.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MASMIPGAQETAAARPATLGGMLALAPADAIALTFEHQTLTYAQLREQAAHMAGGLHGQGLRAGDVLGIW
LPNTPRWLILHLACASLGVATLSLNLKLGVKELVSFIDRSKCKALAFDRGIANAHALAGNAPPGDGAGFP
EGNSLARVWQQHAGSLQLIIDASVHAGDADAPGWPALAQQMPTAPHRAPGWIRWEALAAAPMASDGDPAT
LARSACIILSSSGTTSMPKLIVHSQSNVALHSQDAAAGFAVDGGSATLLALPMCGAFGYCATMATLAAGA
RLAMHEAFHPAQAADALRQQAITHMFGTNDMVDKMIAPLPADWRPRALRFFGHANFVPGLDDLPAKAQQL
GIPMVGCFGMSEILALFAHQDPAAPLERRSQAGGFPITAGAEVRARLVETGALAAPMEPGELEFRGPHMM
REYLGNPEATAQAFTDDGFLRSGDLGYVNGDGGFTHVSRLGDVLRIGGFLVNPAEIEEAVLNASGASACQ
VVAVNAAGSSRPVAFVIPDAGETMDESAVKALLQQQIARYKVPIRIFAVDAFPCTTGPNGTKVKRNELRE
LAQSLLAQEASK
>gi|319764363|ref|YP_004128300.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MSPTPQQTTRRVLVTGASRGIGRAAMRHLADAGYQVVGLARHAPGDARPDERFVQCDLADLEAARQVVEG
LAREGGFYALVNNAAIAHTTSIADTRVADMNEAMALNVNAALVCLQALMPGMRQAGAGRVVNISSRAALG
KPNRTAYSATKAALIGMSRTWALELAPHNITVNVIAPGPVATELFKQASPPGAEQTRALLAAVPLQRIAE
PEEIAHAIGFLLHPLAGYMTGQTLHIDGGLTISAARL
>gi|319764364|ref|YP_004128301.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MSFRHHCAAAAAALLCTAAQAQGSQPVRIGLIVDQSSVYSAVTGKGSITGAQMAIEEHGGKVLGRTIELL
NFDHQSKADSAASKAREWYDNGVDAIHEASGSAAALAVLNVAKEKNKVLVMSGPASDRITGDMCAPTVAH
WAYNSHALANTVGKAAAERFGKNWFFIAADYSGGQDVVKATTQAIATVGGKVIGEAKHPLNASDFSSAVV
QAQSSKADVVGLANFGNDLVNSIKAAREFGIKPDGKQKLASLLMYITDVHSLGLKTAQGMLLSEAFYWDM
NDETRAFAKKYFARMNAMPNMSQMGVYSSVKHYLKAIEAAGTTDAGAVMAKMRELPVNDVFAKNGKLRTD
GMMVHDMYLFQVKTPAESKYPWDYYKVMGSVPADKAFVPLSESSCPLAKKP
>gi|319764365|ref|YP_004128302.1| exported protein [Alicycliphilus denitrificans BC]
MHLSMLKRAAVLACATVLALPAFAAEDYPRTPITLVVGYGAGGGTDVCNRALALDVGRQLGQPLVVDNKP
GAGSSLSVGFITRQRPDGYSIASLSTGGVLNQVLSPNVKYDVTKDLTPIAMVAQYQVGLLVRADSAYKTM
ADLINAAQSARKPLTYSTAGIGTPQHLTTERLAQKTGTQWVHAPYKSGPEAITALMRGDVDFMAQTAEWV
PYVRDGRLRLLSVFTGERIKGFDAPTLKELGYDLVAPSILGIAGPARMDAAIVKKLQDAFHKAIQTAEFQ
SCADQFGLKPDFKDSAAFGAFLKDTLAGWTPLLRQFASKE
>gi|319764366|ref|YP_004128303.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MTTQHTQSPPAWLEWPFLDDGHRRLAMELDAWCQDHLPHIDETDLRAACRALVSALGQDGWLRYCVVAGD
KGQFGGQAAELDSRSLCIIRETLARHHALADFAFAMQGLGSGTISLAGSDAQKAAYLPAVARGTKIGAFA
LSEPDAGSDVAALSCRAEADGDGYVLNGSKTWISNGGLADFYCVFARTQADAGSRGISAFIVDAGTAGLS
VDDSISVISPHPLASLHFENCRVPRSCMLGPPDQGFKLAMRSLDIFRASVAAAAIGFARRAMQEGLQHAT
RRRMFGQTLADFQLTQAAFGDMATAIDQSALLTYRAAWVRDVQKRASTAETAMAKMAATESAQQVIDRAL
QMFGGKGVTVGNPLERLYRDIRSLRIYEGATEVQKLIISREVLRPFAPH
>gi|319764367|ref|YP_004128304.1| cell division protein ftsz [Alicycliphilus denitrificans BC]
MTIEMIESEEFNQGTQIKVIGVGGGGGNAVAHMIARSVQGVEFVCANTDSQALSRSTAHRTIQLGSNGLG
AGSKPDKGREAAEAAQEDIRQAIAGAHMLFITAGMGGGTGTGAAPVIARVAKEMGILTVGVVTKPFDWEG
GRRMKNADEGLAELEANVDSLIVVLNEKLLEVLGDDITQDEAFAHANDVLKNAVGGIAEIINEYGQVNVD
FEDVRTVMGEPGKAMMGTATASGPDRARIAAEQAIACPLLEGIDLSGAKGVLVLVTASKGSLKLSESRLA
MNTINAYASPDAHVIFGAAYDDSLGDDIRVTVVATGLSRQNARRQTMQVVQSLRTGTDNVAYQMPMAGAA
MPGGVLGGAAQAEYGNMQVPSVWRSTRTAATARVDALSSGGMDELEIPAFLRKQAD
>gi|319764368|ref|YP_004128305.1| cell division protein ftsa [Alicycliphilus denitrificans BC]
MAREYKDVVVGLDIGTAKVMAVVAEVMPGGELKLAGLGVAPSNGLKRGVVVNIDATVQSIQQALKEAELM
ADCKIQRVYTGITGSHIRGLNSSGMVAVKDKEVTPADVARVVETAKAINISSDQRLLLVEPQEFVIDGQD
VKEPIGMSGIRLEAKIHIVTGAQSAAENIIKCVRRCGLEVEQLMLNPLASSQAVLTDDERELGVAVVDIG
AGTTDVAIFTGGAIRHTAVLPIAGDLITSDIAMALRTPTKDAEDIKVESGYAKQLLADPEAQVEVPGLGD
RSPRMLSKQALAGVIEPRVEEIFSLVQQVIRESGYEEVLSSGIVLTGGSSVMPGMVELGEDIFLKPVRRG
LPKYSSALADMIAQPRAATVMGLLEEARLARLRGFKVAAKSGSVKTAFGRFKDFIVGNF
>gi|319764369|ref|YP_004128306.1| polypeptide-transport-associated domain protein ftsq-type [Alicycliphilus denitrificans BC]
MNATLPTPLDVRLMNMTATVLFVGCVAGVLVAGGAWLLRQPAFAIGHIAVEGDLVHTSALSLRANVAPQL
VGNFFTVDLEAARRAFEQVPWVRSAHVRREFPSGLRVQLQEHDVAAYWGPEGSATLVDSQGEVFEADADD
VEQDGLPRLLGAPGRSAEMLDMVRRLAPVLEPLGAGIDTLELTGNGGWRVALAGGAVLELGSGTQDLVLD
RARRLVSTLPGVARQQGRGVDALEYADLRYADGYALRLRGVTTVATEAQRVAAQREAERKAAARAAARAR
AAAKNNRGQD
>gi|319764370|ref|YP_004128307.1| d-alanine/d-alanine ligase [Alicycliphilus denitrificans BC]
MTQNDLKIDVQALGKVAVLMGGDSAEREVSLMSGGGVLQALRARGVDAHAFDPAHADLSELKTHGYQRCF
IALHGRHGEDGTVQGALELLGIPYTGPGVMASSIAMDKIMTKRIWRFEGLPTPDWRLVSSSAETAQAFQE
LGSPMIVKPSREGSTIGLTKVTSLGQCEQAYRLAAQHDPEVLCEQFIDGDETTCPVLGQGDAAQALPVIR
IVAPEGNYDYQNKYFTDVTQYHCPSGLPEAEEREIRRIVVQAYRTLGCRGWARADIMVRKSDRKPFLLEI
NTSPGMTGHSLVPMSAKASGISYPDLCLRILASASLDALQGK
>gi|319764371|ref|YP_004128308.1| udp-n-acetylmuramate/alanine ligase [Alicycliphilus denitrificans BC]
MKQAIRHIHFVGIGGSGMCGIAEVLHNLGYGVSGSDLADSPTLRRLRALGVATHVGHAAAHIQGADAVVT
STAVQQDNPEVLAARERKIPVVPRAVMLAELMRLRKGIAIAGAHGKTTTTSLVASVLAEAGLDPTFVIGG
RLNSAGTNAKLGQGEYIVVEADESDASFLNLLPVMAVVTNIDADHMETYGHDFGRLKQAFVDFLHRMPFY
GTAILCVDNPAIRDILPSVTCPVTSYGLSEGAEVRALDVRAVGTQMHFSVQRRNGVTLPDLDVVLNLAGE
HNVLNALAAIAVATELNVPDEAVLRALAGFTGVGRRFQRHGDLPAQDGGRFTLIEDYGHHPVEMAATMAA
ARGAYPGRRLVLAFQPHRYSRTRDCFEDFVKVLGTADAVLLTEVYAAGEAPIVAADGRSLARALRVAGAV
EPVFIDDVADMPQRIAASAKDGDVVLCMGAGSIGGVPAKIVEMLQKNELPAQEGRAQ
>gi|319764372|ref|YP_004128309.1| udp-n-acetylglucosamine--n-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase [Alicycliphilus denitrificans BC]
MTQKTALIMAGGTGGHIFPGLAVAEELRARGWLVRWLGTPGSMESRIVPQHGFDVETIDFSGVRGKGLVT
LALLPLRLLRAFWQALAVVRRVRPDVVLGMGGYVTFPGGMMAVLAGRPLVLHEQNSVAGMANRVLAGVAD
RIFTAFPGVFKKGQWVGNPLRTAFTQQSGPAERFAGRQGPLRLLVVGGSLGARALNEIVPQALALIPEGR
RPVVTHQSGAAQIEQLRASYEAAGVQAELTPFIDDTAAAYAAADVIVCRAGASTVTEIAAVGAAAVFVPF
PHAVDDHQTTNARFLVDAGGGWLVQQADLTPRGLAEMLLNMERPALMERALKAKNMQKTQATREVVAACE
ELAV
>gi|319764373|ref|YP_004128310.1| cell division protein ftsw [Alicycliphilus denitrificans BC]
MTAAARPSLWQRLRALAGAQPAKTADVLPVRVGGTEYRRTTATPARVLGFDQALLWVVVLLLAFSVVMVY
SASIAMPDNPRFGNIAPTHFVVRHVVAIGVGFVAALLAFQVPMNSWERMAPWLFVASIALLVAVLIPHVG
TVVNGARRWLSLGIMNFQPSELAKFTVLVYASDYMVRKMEVKERFFRAVLPMGVAVALVGALLLAEPDMG
AFMVIAVIAMGILFLGGVNARMFFLIAAVLVAAFAVIVMTSPWRRERIFAYLDPFSEAHALGKGYQLSHA
LIAIGRGEIFGVGLGGSVEKLHWLPEAHTDFLLAVIGEEFGLVGMLVLIVCFLWLTRRIMQIGRQAIALD
RVFSGLVAQGVGIWMGFQAFINMGVNLGALPTKGLTLPLMSFGGSAILMNLVAIAVVLRVDYENKLLMRG
GRT
>gi|319764374|ref|YP_004128311.1| udp-n-acetylmuramoylalanine/d-glutamate ligase [Alicycliphilus denitrificans BC]
MNDERPDPLNPETPAPEAAAPAAAPAFDYQAPAVSAADQAKEFVARIFSDMGGAEEPAAQPQQPPQEEAG
AAPESESRLPAIHPGEALGYMAGRRVLVLGLGTSGLAMARWCARCGAQVTVADTRENPPQLAQLRAELPQ
LEFIAGPFGAALVEGHALDAVYRSPGLAPTDVAPVVIAASARQIIVGGELSLYSEALHELRTRHGYAPAV
LAITGTNGKTTVTSLTGLLVDCAGKSVAVAGNIGPTLLDTLGERLDAGQLPEVWVLELSSFQLDGAQGFE
PTAATVLNVTQDHLDWHGSMQAYAQAKARIFGAAGLMILNRDDPLVMDMLPPPVRVKLQKPQLRAHVTFG
GDMPQRPGDFGIEVVSGMAWLVRAHDADETARRGKVQEAELHVQRLMPADALRIRGRHNALNALAALALA
QAAGCALAPMLYGLREYRGEPHRVEPVGMVREVEYFDDSKGTNVGATVAALTGLGADRRLVLILGGDGKG
QDFSPLAAPVARYARAAVLIGRDAPQIRAALEGCGVPLLDAATLPEAVQLASQRAHAGDAVLMSPACASL
DMFDNYGHRARVFVAAVQALAEDAGQPLEGGHA
>gi|319764375|ref|YP_004128312.1| phospho-n-acetylmuramoyl-pentapeptide-transferase [Alicycliphilus denitrificans BC]
MLLMLSQWLQGLSPDFSFLRVFQYLTFRAVMAALTALLIGLMAGPRVIRMLTALKIGQPIRGYAMQSHLS
KSGTPTMGGVMILGSIALSTLLWFDLSNRFVWIVLVVTLGFGAIGWVDDWRKVVNKDPEGMRSREKYFWQ
SVIGLAAALYLVFCISENSNARVFELFVTWVRSGFSLDLPPKAGLLVPFFKEVSYPLGVLGFVVLTYLVI
VGASNAVNLTDGLDGLAIMPVIMVGSSLGIFAYVTGNAGFAKYLLFPHIAGSGELLIFCAAMAGAGLAFL
WFNAHPAQVFMGDVGALALGAALGTIAVIVRQEIVLAIMGGIFVVEALSVMLQVTWFKYTKRRYGEGRRL
LRMAPLHHHFEKSGWKETQVVVRFWIITMLLCLVGLSTLKLR
>gi|319764376|ref|YP_004128313.1| udp-n-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate/d-alanyl-d-alanyl ligase [Alicycliphilus denitrificans BC]
MSHTSTTPMMTLRQAFDLLRARIPAARLVGDGATPLMRVHTDTRTLAAGDLFVALKGERFDANSLLPQAR
AAGAAAAIAHGALEAAGLPGVEVPDTLAALGVLAAGWRAQRTLPLVAVTGSNGKTTVTQMIASVLRAWKG
DAALATQGNFNNDVGLPLTLLRLRPAHEAAVVELGMNHPGEIAYLAGIARPTVALVNNAQREHLEFMHTV
EAVARENGSVLAALCAGGVAVFPAADAFTPLWRELAGAHRCITFGGDAADVRCAHAQWQDGAWHLRVQTP
QGAFDTLLSIAGRHNVTNALAAAACALAAGAPLAAIARGLAAFEPVKGRSRAFAVRCQGRAIAVVDDSYN
ANPDSVRAAIDVLAELPGPRLLVLGDMGEVGGQGPQFHAEAGAHARSRGIEQVFALGALSAHVAGARHFE
DMASLIAAVRAQLPGVGSVLVKGSRFMKMERVVQAIEEEDACS
>gi|319764377|ref|YP_004128314.1| udp-n-acetylmuramyl-tripeptide synthetase [Alicycliphilus denitrificans BC]
MSAPQALASVDAAVAWLRARVTGTLQTDSRLVAPGDAFIAWPGAATDGRAHVGDAMARGAVACLVEQEDV
EPFGLAGEHIAALPGLKAATGLIAAQWFGRPSERLQVLAVTGTNGKTSTAWWLADALNGLSKKELPALAG
CALVGTLGIGVPPGLSSTGMTTPDPVRLQRAFAQFAQEGLGACAIEASSIGLAEQRLAGTQISVALFTNL
TQDHLDYHSDMAAYWQAKRVLFDWPGLRAAVVNIDDAHGARLHAELQGGGLDLWSVSIQGPARLQARDIV
HRGAGLAFTVAESAQALPLQTRLIGLYNVSNLLGVIAGMRALGVPLAQALDACARLAPVPGRMEQLAFAG
QPLVAVDYAHTPDALHQALAALRPMAAQRGGRLWCVFGCGGNRDAGKRPLMGAVAQREADRVIVTSDNPR
GEDPRAIIHQILLGTIAGTSVRAEEDRAAAICLAVAEAEAADVVLIAGKGHEDYQETAGQRQPFSDMAHA
RAALARRGAAA
>gi|319764378|ref|YP_004128315.1| peptidoglycan glycosyltransferase [Alicycliphilus denitrificans BC]
MSSRSVNYTSSPLLASRTPLWRSRFIVALMALGFLALAGRAAYVQVFGNAFFQRQGEVRFARTLELPANR
GRILDRNGLILASSVPAASIWAIPEDVETDKPEVRAKLKELARLMGMPLPALMAKLADEDKTFVWIKRQL
DWDVGQQIHALGLKGIYQRKEYKRQYPEGEAAAHVVGFTNVEDHGQEGMELAFDKELAGKPGSRRVIKDR
LGRVVEGVGADVPPVDGKDMQLSIDSKVQFFAYQKLRDTVTEHKAKAGSVVVLDAHTGEVLALANYPSYD
PGKRVNLTGEQLRNRALTDVFEPGSTMKPITIGLALNSGRVRPETVIDTTPGRITITGSTISDTHNYGVL
TVEGVIQKSSNVGTTKIAMQMPAQEMWETFSAVGFGQKPQIAFPGAVSGRLRPYKSWRPVEQATMSYGYG
LSASLFQMARSYTVFANGGKVIGATMLKTDQPAVGVPVFSERTANQVRKMLQMAAGPGGTGQKAQTVGYS
VGGKSGTARKQVGKSYASGKYRAWFTGLAPIDKPRIIVAVMIDEPSNGVIYGGAVAAPVFSEVVQQTLRM
MGVAPDMAVKPLIVTNAVEESL
>gi|319764379|ref|YP_004128316.1| cell division protein ftsl [Alicycliphilus denitrificans BC]
MTRIGVVLLLAVMASALYLVHTQYQSRRLYTELDRALAESRRLETEHQRLQVEKRAQATPLRVERLARDK
LQMRTATPAITQYVTADGAPVVAPAAPVAAGGRP
>gi|319764380|ref|YP_004128317.1| s-adenosyl-methyltransferase mraw [Alicycliphilus denitrificans BC]
MNQPLQHTTVLASEAVDALLGGAAAPVGTFVDGTFGRGGHARLILQRLGAQGRLVAFDKDPEAIHEAARI
HDARFSIRHQGFSHLGELPAASVAGVLLDLGISSPQIDDPARGFSFRFDGPLDMRMDTTRGQSVAEWLAG
AEAAQIAEVIRDYGEERFAGPIAKAIVARRTQGGPIVGTAELADIVAGAVKTREPGQNPATRTFQAFRIF
INAELEELQQALEASLTVLAPGGRLVVISFHSLEDRIVKQFIARHSKEMFDRRAPFAAPTPMRLKALGRV
KPSAAEVVANPRARSAVMRVAERTEVPA
>gi|319764381|ref|YP_004128318.1| mraz protein [Alicycliphilus denitrificans BC]
MFQGASSLSLDVKGRLSVPTRHRDALLAQAGGSLTITKHPDGCLMVFPRPEWEQVRERIAKLPMSAQWTK
RIFLGNAMDVEMDGTGRVLVSPELREAAGLTKEAILLGMGSHFELWDKATYEAKEAAAMQAEMPDVFKDF
SF
>gi|319764382|ref|YP_004128319.1| heat shock protein hslvu, atpase subunit hslu [Alicycliphilus denitrificans BC]
MTPQEIVSELDNHIVGQAAAKRAVAIALRNRWRRQQVDSGLRQEITPKNILMIGPTGVGKTEIARRLARL
ADAPFIKVEATKFTEVGYVGKDVDSIVRDLVEVAVKQTREADMKKVRARAEDAAEERILDVLIPPPRGGE
SSDGTARQVFRKKLREGQLDDKEIEIDVADARPQLEIMGPQGMEEMAEQLRGMFSHLGQERRKTRKLKIA
EALRLLTDEEAAKLVNEEEVKTRAVSNAEQNGIVFIDEIDKVAARQEAGGADVSRQGVQRDLLPLVEGTT
VSTKYGMVKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELGSLSVQDFEAILTQTHASLVKQYQALL
ATEGVALEFTPEGITRLAHIAYDVNERTENIGARRLSTVMERLLDEVSFDATRLSGQTVVVDADYVNARL
QSLSQDEDLSRYIL
>gi|319764383|ref|YP_004128320.1| 20S proteasome a and b subunits [Alicycliphilus denitrificans BC]
MEQYHGTTILSVRRKTAHGIQVALGGDGQVTLGNIVVKGTARKVRKLYQGRVLAGFAGATADAFTLFERF
EAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADHSASLIITGNGDVLEPEEGIVAIGSGGAYAH
SAAKALLHNTELPAVEIVKKSLEIAGELCIYTNMHHTIETL
>gi|319764384|ref|YP_004128321.1| hypothetical protein Alide_3718 [Alicycliphilus denitrificans BC]
MSKDDTTPGGLLSKMVKFVRNPTVSWSDLDAIDADRESQYSRQMLKEMIERKRRNDFVRRREFDQLRKLR
QREAQQGRRLDDALARASFFQTSMTSPGERAVTLKKIDEIEAQMSQQWWRGTRQGDASAPAAAAPEPTAP
AAPLQPPAVAQPAPVPPLGAGALHANPDHAFAPTAPLSMPATLGAVSAEQLIAGAGVLGAAAWGDGAGAG
RAAVPMAEPFVHEPDLEEAAIRFASGDYAQAESALKEVLAQHRQDEPRQQHDIWMTLFDLYRATGQQEPF
DMLSIDYAARFGRSAPLWFSLPEKLGLQAAQEQPGQPGAAPHELSWNAPPTLTQQSVAALQASLARSAPP
WTMNWSRLAEVELSAVSALVQQFEDWAGRDGQIRFVGVQALQALLHAHTPSGDREVDPQWWRLRMAALRL
MGQPDEFELVALDYCVTYEVSPPSWVPPRCGYSGDDGVQPAEGLDVADSDPFLSSFGPSQPAQAQEGPVA
VMEGHIEGDATPALESLQAMARPGAPLTVNCERLVRIDFAAVGSVLNWAAAQQAQGQMVQFTHLHRLVAV
LFNVIGINEHAWVVPRAN
>gi|319764385|ref|YP_004128322.1| RNA polymerase-binding protein dksa [Alicycliphilus denitrificans BC]
MTTTLQTPVAAAKKDPKLANNWKTKPAEELTDAEVLAMPDGEYMNEKQLAFFRHKLVQLKQDMHNNAGET
TEHLREDTVVVPDPADRATIEEEHALELRTRDRERKLLKKIEQSIARIDAGDYGYCDETGEPIGVGRLLA
RPTATLSLEAQQRRELKQKMFGD
>gi|319764386|ref|YP_004128323.1| cobalamin synthesis protein p47k [Alicycliphilus denitrificans BC]
MSLIPATILTGFLGSGKTTLLKRVLSEMHGQKIAVIENEFGEENIDTDILRTESKEQIVQMSNGCICCTI
REDLRETLQLLAAKRRKGLVEFDRVVIETTGLADPGPVAQTFFMDDEIAETYLIDSIITLVDAKHAQQQL
DDRQEARRQVGFADQIFLSKTDLVSEDEKNDLIHRLKHMNPRAPIRAVHFGEVPLSEVLDLRGFNLNARL
DIDPDFLKEEDAHGHGHVHDEHCGHGHHDHDHEHGAHCNHPHHHHHDDDVKSFVYRADRPFDPAKLEDFL
GAIVNIYGPRMLRYKGVLHMKGTDRKVIFQGVHQLMGSDLGPQWGESEQRQSKMVFIGIDLPQDILLQGL
EQCLVS
>gi|319764387|ref|YP_004128324.1| response regulator receiver [Alicycliphilus denitrificans BC]
MPEPVPRVLLLEDDGLARHFVREALDGMALELLPCASLAEARRLLSAHAVALVLTDLHLPDGSGLDLLRW
LQERGGDCRTVVFSGGVDDGLRQRLLAQGVWRVLRKPVSVGDLIDCVEQALARPPAGLQQERRPDAADAG
AAAQYFGGDRALYEAYRGMCLKQFPIDVAEGDRAADHGDAPALYRVVHNLKSVLTLLGQERSAQLAHSVE
SHAAHARRLAAAAPAGAGVPDMARGLSPAVIRHCQWGDGPCTTIVFLHPTSTGRTAVRQRFRNQGAQPGL
GHWSSSDSQNTRRNPMTDTWLTTLITDTPQQGFELAITLSRRGVKYTQPDSEVLHKLRPEYANDHAALTA
ASQVIALNFQTVAAANNYWRK
>gi|319764388|ref|YP_004128325.1| DNA binding domain protein, excisionase family [Alicycliphilus denitrificans BC]
MLTKPLLSLPTECSTREVAHALGLAVRSVQLMVDRGDLEAWKTPGGHRRISRASVERWVARCRQEGPAAE
ARAGAGTPAAAAGAAAPEAPPAVGGASQAARRAQVLLIEDSAHFQNLVRLLVAHNFPGIDLHVAEDGIVG
LAMAGALRPDVLLVDILLPGIDGATLIARLRSHPQFERSRLIVLTSLDEEQRSAYAYALAGLPVVHKPRM
VEDLPVLLREALHA
>gi|319764389|ref|YP_004128326.1| response regulator receiver [Alicycliphilus denitrificans BC]
MSLRILIVEDHADIRKLIRMTLEFEDYEIHEASNADEGREAVRRLRPDLLLLDVMMPGSMNGLDLCRLLK
SDASLGLPRVILLSARGQGQDIEAGMNAGADAYLLKPFSPLKLIETIDSLGGHHGKAP
>gi|319764390|ref|YP_004128327.1| DNA binding domain protein, excisionase family [Alicycliphilus denitrificans BC]
MKNEPVISLPAECSTRDVARALGLTARFVREMAEQGELRGWKTPGGRWRIARESVMSWLELRQLCVPGQP
AAPGGPAGDAEGGLSCEIVLRPRRFPQRVLLIEDSAHFQTLVKLLVGHEFPQVDLHVADDGIDGLVMAGR
LEPDVLIVDILLPGIDGAALVGRLRWHPLFQSCQFIVITSLDKESRAPYAFALAGVSVMHKTKLVQDLPS
LLDRALALPDAR
>gi|319764391|ref|YP_004128328.1| response regulator receiver [Alicycliphilus denitrificans BC]
MSKRILIVEDHADIRKLIRMTLEFEYYDIHEAANAQEGLDAIRRLHPQLVLLDIMMPGEMDGLDLCQMVK
NDPSLGLPQVVLLTARGQNKDIEAGMNAGADAYLLKPFSPLQLITTIDSLGIQTTETQ
>gi|319764392|ref|YP_004128329.1| metal-dependent phosphohydrolase hd sub domain protein [Alicycliphilus denitrificans BC]
MMPPAVEATQFDRAAADQMTKIISDLSRMYHERNEALQEVARAHHEALLLLAMAAEYRDDDTGLHIVRIG
FLAEALALRMGQSRHYAELLRKAAPMHDIGKIGIPDCVLKKPGPLTPAERQVMDRHPVIGADILGKSRTP
LFQLAAEIALTHHERWDGTGYPNRLSGEDIPLSGRLVSVVDFYDALTMDRIYRQAYDHEKVMDMLSRQSG
KAFDPAIVDCFIHHGDELHAMRLAVKDNGTGFTQLIQNQSGSQQGPPHFQGGNAACQPP
>gi|319764393|ref|YP_004128330.1| pas sensor protein [Alicycliphilus denitrificans BC]
MLILTLAAGTAAMVWREFRHAEQRDRQQLAFMASAMESHATQVLEAGGTVLDHLAASLLKAPDDLASLEE
LQAGYLRSLPFLQGLSAIAPDGQVLTSTHLADRGASVDLRWLEPRPVQGDRMVIGPWTPGRTLTESTRQA
AAPARAGFIPLVRRVQLSPSRSVLLVAQLNPDALTGHQQRLFDTSPPGTRALLALDDGSLLSQSGGESHY
RGHSLRTHPLLRDGLPVSHVGGYGPAQTLGSLSLGAWQRSGSQPLVSLVERPYASAPRRVLDALREPLVF
MLPALAWAAFLARSAWLNAHRREIALAESDRTQRQQLQDQQAFTSLLLETIPLPVCTTDLEGRFLTVNQA
WERFMGLQREHVLGLRGSEFMPPEAALAYEANDEDFGTRICYEARLRRHDGSARTVEITKVRRLSHQGQP
LGLLIAMKDVTDLPARQEPAERGTRAGNRGFVTRINHELNRPLQSILGFSELGMARASAPDTLRAMFGDI
HAAGRSILEFLNELLDIPKTEGSIDSFHFERHDVRALVGETVAGLTPRLARKRLALELQLGAAALVAKVD
SRRFTQVMHYVLTSAAQFSPEGQAIHVAASSLDQTSIHISVCDRGPGRSQGPGIAQEEIQAVLQTFTQLG
QTGEDSPGVDLGLAVCHKIITAHGGRIYTTNAPEGGVVFHITLPHAGQRIPEPAAPQWTESP
>gi|319764394|ref|YP_004128331.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MDRIPVIKRWQSKVGAEAAYSTTAYIFTACILLATWLASAALLHWQWQETLDAEVRENTTTALTLREYTQ
HILDSADNAMRRLQAGMLTDDVCKDIVRITNETGIAPHILTQLSFIGPDGRFRCSNLDPDGSRSRNVDLM
DRAHVRVHLLPAAAGAPLAGMLHDGLFISYALEGRVSGTWTIQMTRRVESRDGSTRGVLVASLKQSHFSD
VYRSAKLGPRGGVILAGLDGVVRARAIEGGSPEADMLLPGALTRLLGAQRDGATTSVSFDDLPRIVAYSR
VGDYPLAVVSSTTQGNALATWRTTRNAIIVLEALLSLVVVGFVVLFLSSIRRLARSEAQAQSASRAKSDF
LAAMSHELRTPLTSIRGFAELMELRSKDPLVREQSALIRQGAEHLNALLTEILDLAKVEAGSMPTHPEPV
ALPVLVHEVTELFRVSAVVKSLQLEARLLPEAEQPLVTDRLRLKQILNNLLSNAIKFTAQGRVELAVEPD
ADGRQMLFHVTDTGPGIAPELQEVIFEKFSQGNARVSYQHGGTGLGLSLSRALATLLGGTLTVQSSPGEG
ARFTLALPLQAPHAEGQQLRQLSVP
>gi|319764395|ref|YP_004128332.1| chemotaxis sensory transducer [Alicycliphilus denitrificans BC]
MTVRTRLALGFGLMALMIILMGAVALFETRAMHDDLRAVVRDQYPKISQLRDIKDLLGTNEVALNSMLHD
RDAARIDRQVAAVLETRKRIGERLNTLQTLITSERGKAGMERFKGPRAQYIDLQNRYIEAIKAGRTDDAR
AIVIDQIPAVRATYHDILNDLIHEQNRDMDASIEAATGAVRSIQWAIGLTTAAALVLALLMARWIIRAIT
RPISEAVTIADAVAAGDLTHTIEAKGSDETAQLLRALQRMQEGLVRVVRKVREGSESVATASAEIAQGNQ
DLSARTEAQASALEETAASMEQLGATVRQNADNARQANQLAQGASTVAVQGGTVVAQVVETMSGINDASR
KIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAEAAKEIKQLITDSVQRVE
QGSQLVDRAGATMQEVVGSIRRVTDIMGEISAASGEQSAGVSQVGEAVTQMDQVTQQNAALVEEMAAAAS
NLNHQAQDLVQAVAVFKLDQGDGPAVRREADRPQPRLAVPTRQARPATAKLPVPTPSPAVQTKAVEPEGE
WESF
>gi|319764396|ref|YP_004128333.1| tyrosine recombinase xerc [Alicycliphilus denitrificans BC]
MQPETPQPPQLPPEALQYLEHVRVEKRLAARTLTLYTLDLQRLAAFAADAGLPLLRLTGAHVRRFVAQMH
AAGRSGRGIALILSGWRGFYAWAARQGLVPHNPVQDVRAPKAPKPLPKALPVDEAVRLAEHEESGADPWL
EARDAAIVELLYGCGLRVGELVGLDVAPSPAAHQQGRGWIDLQAGEAHVFGKGAKRRSVPVGRAAAEALR
GWLAVRAQPFGGAAADAALFVGRRGARLSAQSVWLRLRQRSQRAGLTTPVHPHMLRHSFASHLLQSSGDL
RAVQELLGHANITTTQVYTRLDFQHLARVYDQAHPRARRK
>gi|319764397|ref|YP_004128334.1| hypothetical protein Alide_3732 [Alicycliphilus denitrificans BC]
MTSSSSPVSPITEDDIAHFLVNTPGFFERHAELLASVTITSPHGQRAVSLHERQAEMLREKIKGLEHRVM
DMVRHGHENAAIADKIHQWSRRLLAERDAAALPQAVEQGMQALFDVPQVALRLWGMAPGHAGQPFAQGVS
EDVRSFASSLTMPFCGPNLGFEATAWLAQTGQVQSLALLPLRRGAIDSAEQPAFGLLVLGSPDPHRFEAT
MGTEFLARMAELASAALSRLL
>gi|319764398|ref|YP_004128335.1| diaminopimelate epimerase [Alicycliphilus denitrificans BC]
MQIRFTKMQGAGNDFVVLDETRERLGLTPAQYRFLADRHFGVGADQILTVRPSPAEGIDFEYLIHNADGG
QVQQCGNGARCFARYVRDKGLTAKDRIRVQTMAGVIAPELTADGRVTVDMGRPVLDPARLPFDTAGLVPV
PQGSVKKWPLALDGKAPQATVMIVAVSMGNPHAVQLVDDVDSAPVARTGPLIEGHPRFPQRVNAGYLQVV
GRTEVRLRVYERGAGETLACGTGACAAVVAGIGLGLLDARVDVHTRGGLLTIAWAGGLQDPVFMTGPATT
VFEGQIDIPETP
>gi|319764399|ref|YP_004128336.1| nudix hydrolase [Alicycliphilus denitrificans BC]
MPRQNQQLHPHREPATPLDAATVLLLRDAPQPGGASALEVLMTRRSDKASFVPGAYVFPGGGIEPQDADP
ASHALADHRPAQDAARLTDAMAAIRESFEELGVLLARRADGSWADADDIAALERKPAPGTTFAAQCAARG
LRLAADAVYQLAHWTGDRNLPKRFAVPFLVARMPAGQEPVADESEQFEPVWVRPADALARHEAGQFFMIF
PTIRTLQRLAQFADVDAVLAAVAGEKPLWVSSPRSGLLGGKEARFMEHEPPYGELALVTPTGRSEHALDW
QSETPVPLLRNVQRLTAPNPGVMTGPGTNSYLVGDPGTGYIAIDPGPADLAHLERLWRAAGGDIRMIACT
HSHADHSPGAAPLQAMVVAHGRPKPSILGLPSAPTARAASQFTPDRALQNGELLALTGQAPEGRITHTLE
VVHTPGHAANHLCLLLREDGLLFSGDHILNGSTTVIDPPDGNMADYLDSLDRLDALCAVHGVEFILPAHG
YVLGEARAAIARLKAHRLAREAKVLAAMQALPEGSMDDWVRLAYDDVPPRMWPVAQRSLLAHVERIRMLE
PGND
>gi|319764400|ref|YP_004128337.1| RNA-binding s4 domain protein [Alicycliphilus denitrificans BC]
MTEAGAGEAVRLAKRVAQQLGCSRATAEQYIEGGWVSVDGRVVEEPAARVAPTQAVALAPDANLLDLRPV
TLLLHRPANANAQEFLRAERHAAELDRPGTRVLRRHLRALECAAPLPAGASGLTVYTQERRIARRLAEDM
ALLEQECTVHVEGQIAPDGLQALGRNLPHHGGLAAPHLKASWQNETHLRLALKGVDMARIPELCAAVGLR
VLGVRRIRMGRLPLARLPEGQWRYLQPWERF
>gi|319764401|ref|YP_004128338.1| hypothetical protein Alide_3736 [Alicycliphilus denitrificans BC]
MRVLCAQHNGEIVIDRPDPMTLLQSTMLMLTASCALLLIGFSARESRWGPALMMLGIVGSLLIIAYNIYE
QLPAR
>gi|319764402|ref|YP_004128339.1| cysteine synthase [Alicycliphilus denitrificans BC]
MRADNVLQTIGNTPHIRINRLFGPSANVWVKSERANPGGSVKDRIALAMVEDAERSGALKPGGTIIEPTS
GNTGIGLALVAAVKGYKLILVMPDSMSIERRRLMLAYGAQFDLTPKEKGMKGAIARAEELAAQTPGAWIP
QQFDNPANADVHARTTAQEILADFPEGLDVLITGVGTGGHLTGCARVLKAKFPQIKVFAVEPSLSPVISG
GAPGPHPIQGLGAGFIPKNLDTSLLDGVIQVDAEPAREYARRAAREEGLLVGISSGATLAAIAQKLPDLP
KGARVLGFNYDTGERYLSVDGFLPTA
>gi|319764403|ref|YP_004128340.1| heat shock protein dnaj domain protein [Alicycliphilus denitrificans BC]
MTAARHAPVRIPAAHHGAPLGGQQKTFNHHIEQIARQRELLADWQQAIDAYRERHAREAVPLQRAYVALV
AELVRHLDAQSSDKRLAKSERRALSEAIAGRLTMLIDAVPDEATRAGLQEIHDRHGGSDSDAGEAEGGDM
AGQECDADMDSPEDFMRRLDEQMQARKEEAERQREAHRATRRRKPGARERKAREAAAQATQSVREIYRKL
ASQLHPDRETDPAERERKTALMQRVNQAYAANRLLDLLQLQLEIEQITPDHIAGLSEERLAHYNRVLAEQ
LKELQQEVREVQGHFLREFGLDPARSLKPANLMRELRAHLQIIEYENLQLRRELNALRADPAALKGWIQA
ERQQRKARHGDMDPWS
>gi|319764404|ref|YP_004128341.1| fad dependent oxidoreductase [Alicycliphilus denitrificans BC]
MLRLSELRLPLAALPLEPEQHPEAALRALAAQALGMDGGAIATLQVHKRSFDARKADLLAVYIVDVALAD
PAQERALLARHAADPHIQSTPDMAWHPVGHAPAAGMERPVVVGFGPCGIFAALVLAQMGLAPIVLERGKA
VRERTRDTWGLWRRRELNPESNVQFGEGGAGTFSDGKLYSQIKDPRHLGRKVLQEFVDAGAPPEILYAAH
PHIGTFRLVKMVQALRAQIIALGGEVRFEQRVTDVLLEGRHLRALRVLDLRTGQESELAASHAVLALGHS
ARDSFAMLHARGVAMQAKPFSVGVRIEHPQGVIDRARWGKHAGHPLLGAADYKLVHHAGSGRTVYSFCMC
PGGTVVAATSEPGRVVTNGMSQYSRAERNANAGMVVGVDPRDYPRDPAAFEALLGATHGVEALAPGQAHP
LAGVVLQRQLESRAFALGGGDYNAPAQRVGDFLARRTSTALGEVEPSYKPGVTLTSMDDALPAYATEAMR
EALPAFARKIRGYDMADAVLTGVETRTSAPLRIDRGENFQSLNTPGLYPAGEGAGYAGGILSAGVDGIKV
GEAVACAMLGVPLPSSGTRGSGGAA
>gi|319764405|ref|YP_004128342.1| carboxymuconolactone decarboxylase [Alicycliphilus denitrificans BC]
MTDTREDSLRRGLDNRRRVLGDEWVEQSIARANALNVEFQRMITSYAWDGIWSRPGLDRRTRRIMVLAIT
AAMGRWEEFELHLRTGLLADPDDPEAAPLDVDTIKEVLLQTAVYAGVPAGNTGIAIALKVLKELGRTPPP
AAFGEQAKL
>gi|319764406|ref|YP_004128343.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
METAYLESFLLVVETGSMAEAARRLDITAAAVAQQIHSLEREFHAPLLARAGRTVQPTPAGHRLAHSAPA
LLRELANAKTQVNEAGAAGELVIGTINTALHSLLPDILSGFVARCPNVKVFLESGTTRQLYQAVQQGRLD
AAVCLHPPFALAKTFDWALLREEPLVLLAPRSLAHLEPHELLRSQPLIRYDRQLGGGQMVERYLRAAQIA
PRERFELSSLVAIAMMVDKGLGVALVPDTALAWPDGQGVVRLALPMRQAEVRRFGVIWLRASARLPLIHH
LVACARAVVAERGGPQAPPR
>gi|319764407|ref|YP_004128344.1| citryl-CoA lyase [Alicycliphilus denitrificans BC]
MRSKLFVPASRPELFAKAVASEADALSFDLEDAVAEPRKNEARTLLRGFLQSAQAQGHGKTLIVRVNAMD
TPHFAADIAAVVRPGLHLVNLPKPDSPEAVAEAAALVAEAARANGVQEPPRLLLNIETPKALRTAAALAC
AHPLVAGLQLGLGDLFEPYGVHRREPSALQQALFAVRMAAAEAGVFAYDGAFADIRDTEGFRAEAELSRR
LGFIGKSCIHPSQIALANSVYQPTDAEIAHAQRVLQAAQQADAGAVGAYVVDGKMVDRPFVLRAQAIVAS
ARASGLVSN
>gi|319764408|ref|YP_004128345.1| hypothetical protein Alide_3743 [Alicycliphilus denitrificans BC]
MTPSRRRFAMAATAALAAFSGLAHADAPYPARPITMVVPYPPGGSNDVFARQVAKELSDLLKQPVVVDNR
PGASGNTGTGYVAKAAPDGYTIVAVSSSMTTNAAVQAKLPFDPIKSFAPVAMFAKGPFVVAVNKDFPART
PAELVREVKAHPGQYNYATSGTGSVNHFATELLRSMAPGFDITHVPYKGQGPAVTDVIGNQVQMMISSGP
SILPMVRGGKLRAIGITSLAPSPIAPDLTPMATAVPGYEFDLWWGLLAPAGTPPAIVNQLNQAVNQVLAK
PEIKASFLREGAIVQPVTPAQFADIIQRDVKRWQTLAKERNITAD
>gi|319764409|ref|YP_004128346.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MSQPTIQRQGPRGPLSGVRVLDLSAYIAGPYGCSLLADQGAEVIKIEPPVGDNLRKYPSTLEAESRAFLG
VNRSKWGMVLDLKNEADHATLLRLVRGADVLVHNFRPGVPERLGIGFGQLTELHPRLIYCSVTGYGQQGP
LKAKAGYDQVLQTMTGMCAMQGKAGGPPEILYGSVVDYYAAALVASGVASALYEREKSGLGQHVGVSLLR
AALTMQSARLVWAEGEPREVGRDMRSGGITGIHPTQQGHLYLSANTQHFWAALCHKVGLPELASNERYDT
VRKRAQHHAELVPLLRQALAARTALEWEALFGEEVPCAAARAVEDMFDHPQVLAEGLIERFEHPTLGSYR
GFAGPLDFSRTPGPAPFAAPTLGQHTAALKESAASRAST
>gi|319764410|ref|YP_004128347.1| amidohydrolase 2 [Alicycliphilus denitrificans BC]
MTSASGQPKLPAGACDAHLHVFDPRFPAEAPHAMRAHAAAADYRALRQRLQLQRAVVVQPRAHGIDNRVT
LDAIQALGPQQTRGIAVLRPDVQEAQLQSLHDGGIRGIRFSLYTDRDAMVSLDMLEPLARRVAALGWHVQ
LHWRADQIADQRGLLERLPCALVFDHMARLPVHEGRRHPAFDVVRGLVQQGRAWVKLSGPYLNSAAGLAT
GYADGDALARAWVREAPERLVWGSDWPHVTERANPPDTAMLLAMLQRWIPDDATRERVLVANAAELYGFE
>gi|319764411|ref|YP_004128348.1| hypothetical protein Alide_3746 [Alicycliphilus denitrificans BC]
MKKFCLALAVLAVAHGGAHAAGYPEQTITVVVPFSAGGGADNAARIIAQGLSQVSGQSVVVDNRAGASGS
IGATYVARAKPDGYTVLYDASSFAINPALRKLPYDPAQDFIPVSQAIRVPNILVAAPASPYNTLSDYVRV
AQAQPGKHTYASYGPGSLAQMAGELLKIGAKIDTVHVPYKGGAPAIVDVMGGQVDVYFANAASSLNYVKA
GKLKALAVSSRERMPELPNVPTVRESGVKDFEVEEWNGFFVPAGTSPAIVARLQELVQKSLALPATKSGL
EKLGLTPVGSNAAQFSGFVAAERARWAQVVKTNHITAD
>gi|319764412|ref|YP_004128349.1| regulatory protein marr [Alicycliphilus denitrificans BC]
MENQNNEDDTTRMELANRLFFKLYQCANMLHKTGSRAVESEGLTTQQWAVLGALSRAPEGMSIGALARYL
MVSRQNLAGLIGRMEREGHVRSAPDGRDRRSRLVAMTEEGRTTWEQGAQAKIEDYYARALEGFSVSDQVH
ALHYLLKLLDNMRRIDAAQGANEGGEPH
>gi|319764413|ref|YP_004128350.1| 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
MQGLKNQTVIVTGGGGGIGSATCRRFAAEGAKVAVFDMNPAAAEEVAAGIRAAGGQAAAFQCDITDRAQV
DAAVAATGAQLGPVGVLVNNAGWDVFKPFVKTVPAEWDRLIAINLTGALHMLHAVLPGMSERRSGHIVNV
ASDAARGGSSGEAVYSACKGGLVALSKTLAREHARHGINVNVVCPGPTDTALLAGVAEGARDPAKLIEAF
KSAIPMGRLGRPEDLASAIVFFGSDDASFITGQVISVSGGLTMHG
>gi|319764414|ref|YP_004128351.1| 2-ketocyclohexanecarboxyl-CoA hydrolase [Alicycliphilus denitrificans BC]
MQFEDILYEVKNGVAWITINRPEKMNAFRGTTCDELIKALNKAGYDRDVGAIVLAGAGDRAFCTGGDQSA
HDGNYDGRGTIGLPMEELHTAIRDVPKPVIARVQGYAIGGGNVLATICDLTICSEKAQFGQVGPKMGSVD
PGYGTAFLARVVGEKKAREIWYLNRRYSGAEAVAMGLANFCVPHDQLDAEVQKIGEELCERSPTALAIAK
RSFNMDTAHQAGIAGMGMYALKLFYDTEESREGVNALKEKRKPEFRKYAR
>gi|319764415|ref|YP_004128352.1| cyclohexanecarboxyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
MNPNPYIDEDLQALAGTARRFAQERVAPGFLERDKTRTLDRALMREMGELGFLCPELPEQFGGLGLGCLA
AGVIHEEIARADLSCSYLNLLSSLNGQILSRYGDPGVVGPWLRKLVSGEALCAIALTEPRGGSDAANLRL
RVERSGDSYVINGEKTSISAADQADIAVVFGRTGRPEDGAHGVTALLVPMDTPGITTNRFDCHGQRAIGR
GSIFFENVRVPANHRLGDENKGFVQVMQGFDYSRSLIGLSCLAVARAALEETWQYITQREAFGQPLSAFQ
GVTHPLAAFDTEVEGARLLCLQGLWLKDKGLPHSAEAGMAKWWGPKLAYDVIHQCLLSFGHGGYDRGPME
QRLRDVLGYQLGDGTAQIMKTIIARTRAGRRNVPA
>gi|319764416|ref|YP_004128353.1| cyclohexanecarboxylate-CoA ligase [Alicycliphilus denitrificans BC]
MEFDAVLLPPRRARMTAQGLWRDRTINDYLDACVAACPDRPALSALQVESGAMRRFSYRELAQMADRIAV
GLARLGAGPGDVVACQLPNWWQFTLVYLACSRIGAVMNPLMHIFRERELSFMLRHGEAKVMIAPKTFRGF
DFEAMLAALQPSLPDLKHLVVVGGSGANSFDALLSGPEWEKEADAQDILTRSRPGADDVTQLIYTSGTTG
EPKGVMHSANTLLSNIVPYAERLRLGADDTILMASPMAHQTGFMYGLMMPIVLKASAVLQDVWEPKKAVA
LIQAERVTFTMASTPFLTDLARTVAESGQGVPTLRTFLCAGAPIPGPLVEQARSALGAKVVSAWGMTENG
AVTLTQLDDGDERSVNTDGCPLPGVEIKVVDVDGRALPPGDSGRLLLRACSNFGGYLKRPQLNGTDADDW
FDTGDLARIDERGYVRITGRSKDVIIRGGENIPVVEIESLLYKHPAIAMAAIVAYPDERLGERACAVVVP
KPGQSIDLPAIVEFLKSQKVALQYIPEKLVVREAMPATPSGKIQKFRLREMLQQDAGSAAN
>gi|319764417|ref|YP_004128354.1| electron transfer flavoprotein alpha subunit [Alicycliphilus denitrificans BC]
MTALVIAEHDNATIKAATLNTVTAAAACGADVHVLVAGENAQAAAQAAAQIAGVAKVIHADGASLKDGLA
ENLAAQVLQIAGNYSHILFPATAGGKNVAPRVAAKLDVAQISDITKVISADTFERPIYAGNAIATVQSGD
SVKVITVRTTGFDAAPATGGAASVEAIAAVADSGKSRFVGSEIAKSDRPELTAAKIIVSGGRALGSAEKF
NEVITPLADKLGAAIGASRAAVDAGYAPNDLQVGQTGKIVAPQLYIACGISGAIQHLAGMKDSKVIVAIN
KDPEAPIFSVADYGLEADLFQAVPELVKAL
>gi|319764418|ref|YP_004128355.1| electron transfer flavoprotein alpha/beta-subunit [Alicycliphilus denitrificans BC]
MKILVPVKRVVDYNVKVRVKSDGTGVDIANVKMSMNPFDEIAVEEAVRLKEKGAATEVIAVSCGVAQCQE
TLRTAMAIGADRAILVETDAELQPLAVAKLLKALVDKEQPGLIILGKQAIDDDANQTGQMLAALADLPQA
TFASKVEIAGDKANVTREIDGGLETLALSLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLESVKPEDLGVQ
VAPRLKTLKVAEPPKRGAGIKVPDVATLVAKLRNEAKVI
>gi|319764419|ref|YP_004128356.1| 2-nitropropane dioxygenase npd [Alicycliphilus denitrificans BC]
MKTRITELFGIEHPIIQGGMHHVGYAELASAVSNAGGLGVITGLTQKTPELLAREIARCREMTDKPFGVN
LTFLPAVNPPDYPGYVKAIVEGGVKIVETAGNNPQKWLPALKEAGIKVIHKCTSVRHALKAEAIGCDAIS
VDGFECGGHPGEDDIPNFILLPRAAEELKIPFVASGGMADGRSLVAALALGADGVNMGTRFIATREAPVH
DNVKQAIVAASELDTRLIMRPLRNTERVLTNAATERVLQKERQLGAAVTFADIAPEVAGVYPRIMQQGDM
EAGVWSCGMVAGLIRDVPTVQQLIDSIMSQAEALIRERLAGMLR
>gi|319764420|ref|YP_004128357.1| hypothetical protein Alide_3755 [Alicycliphilus denitrificans BC]
MKSFAMNRRTALALAAAPLLAGVAGGAQAQGAWPDKMIKLVVPFPAGGPTDTASRIVGQKLAERLKQPVV
VDNRPGASGSIAAAQVAKSPADGYTLMMLATPTLLAPHLYRKTGYDTVKDFAPVATVYDLPIVIVVNPKL
LPDVTDLKGLIAHAKAQKTPLNYTSSGAGSFGHLSMELLKQMGDFDMQHVPYKGGVPAITDTIGGQVPIM
YADLVAALPHIQAGKLRAIAVGSPQRVVMLPEVKTIAEQGIKGYDAVSWGGLLAPRGTPKAVVDRIAAEV
KQILADKEIQDKLLGVGAIAHFQDPAQMGQRIQNDYGRWGQIIRDKGIAPE
>gi|319764421|ref|YP_004128358.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MTSTNPSVQDFPLQGVRVLDLSRVFAGPMCAMVLADFGAEVIKVEHPGRGDDTRDWGLRIGKTETTYYNS
MNRNKRSITIDLQTPEGLKIIHDLVPQCDVVIHNFKTGGAEKLGLGYEQLKALRPGLIYCAVAGYDTSGP
EASRPGYDLVIQGEAGLMALNGEANTPPLKFGVAVVDLMTGMYAAQAILAAMLRRERTGKGQLIEMALYD
CGLMVTGYYGLDALKLGHDPERYGNAHPSIVPYGMYEAADGPLIIAVGNNAQFDKFCRQVIMRPDIVEDP
RFATNVERAKHRLELGPMLKELIHTFPRDLLLERLTAAGIPCGRVAGLHEALTSERTRRGRLVQDMPHPV
VGTTPVFAPPYRLDGRRLPIRNAPPTLGEGTREVLTSLLAMSDEQLQALQAQGVLTLPQL
>gi|319764422|ref|YP_004128359.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MSRSIEDARRVLDAQPFSRLVQAEVMQYTAQVVELRVPVTEQIRQQHGFVHGGVVSYLADNALTFAGGMA
LGPGVVTSEYKINYVRPAVGDFLAARATAVHAGRTQAVCRCDVYAVSDGTEKLCAVAQGTIALMGARKTD
>gi|319764423|ref|YP_004128360.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MTDNALLTRREGAVLVLSNNNPGARNALTPGFYMGLTAALHTAACDTTIGAVVVTGEGGHFCSGGDLRQI
IQRRELPLAERRLRLEGLHNLVRALRDCPKPVIMAVEGAAAGAGLSLALAGDMLVAAKNAQFSVAYVKVG
LTPDGGATALLAEFVSRQVLTELCLTGERVSGERMHQLGVVNRLAEPGQALEQAIALAQQVAAGPELAMA
RIKHLCRVAPRNTLEQQLELEALYMPLSQETEESREGINAFLEKRAPDFAKLRGGRQG
>gi|319764424|ref|YP_004128361.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MNFEHNEDRRMLADALNRYLSEQYPAEYRNQAAYGEAGYSAETYAKLAEIGAIGALFKEADGGLGGAGPD
IHLVFEALGNHLVAEPLLGALLVGRALAEAGTPAQKARLEDIVAGTALAALAHDEPANHYELNRVATTAV
KSGDGWRIDGAKAVVPFGDQAQLLLVSARTAGAVDDEAGISLFLVPGDATGISARGYGRIDGGHAAELGF
AGVQVGADALLGTEGQGYALLERIAGYGLLALAAESLGAMDKAKGDTLEYLRTRKQFGVPIGSFQALQHR
MADMLLEVEQARSAVINAAAAIDETDRVTREKALSAAKYSVGKIGTLIAEEAIQMHGGIGVTWELPLAHY
AKRLVMIDHQLGDMDHHLARWMALSA
>gi|319764425|ref|YP_004128362.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MDLQFTPEEEAFRAEVRAFLKDQLPPQLAAKVKAGQRLTRADQEGWHAILNEKGWLAYHWPKEYGGTGWT
PIQKFIFDDECAMAGGPRLVPFGLSMLGPVLIKYGNEEQKQRWLPRILGGDDWWCQGYSEPGAGSDLASL
KTTAVREGDHYVVNGQKTWTTQGQHANMMFCLVRTDRQAKAQSGISFVLIDMNQPGVEVRPIRTLDGDAE
VNEVFLTDVKVPLENLVGEENKGWTYAKYLLTYERTGIAGVGFSMAALEKLKAIASRVQRNGKPLAQDPQ
FATRMAQVEIDLNNMATTNLRVLASVQGGGVPGAESSMLKIRGTVIRQELLSLIRRAMGPYALPYIEAAQ
FAEYDQEPVGPKEAATAAAAYFNYRKLSIFGGSNEIQRNIISKMILGL
>gi|319764426|ref|YP_004128363.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MREAVIVSSARTPLAKSHRGEFNVTPGAQLGAFSVQAAVQRAGIEPGLIEDLIWGCGYPEGTTGRNIGRQ
TALRAGLPVTVGGTVINRFCSSGLQAIAVAAGRIVMEGVPAMVAGGVESISLMRPAGRTGTADMDPWLLE
HKPALFMEMIDTADVVAQRYGITREDQDAFALQSQQRTAAAQAAGVFEGEIVPCATTMAEKNKETGEVTY
KNVTATMDNCNRPSTTLEGLAKLEPVKGPGKFVTAGNASQLSDGSAACVLMEAKEAERRGLSPLGAFRGF
AIAGCEPDEMGIGPVFAVPRLLERTGLKVEDIDLWELNEAFASQALYCQRKLGIPNERLNVNGGAISIGH
PFGMTGARLAGHVLLEGQRRKARGEKVKWGVVTMCIGGGMGAAGLFEIF
>gi|319764427|ref|YP_004128364.1| 3-hydroxyacyl-CoA dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MSEQASASPVHIRLDGEVLVVTIDNPPVNALRQAVRAGLQEAVEQLEQDAASRAMLIVGQGKAFIAGADI
REFGKPPMAPFLPEVLNRMEAGGKLVVAAIHGPALGGGLEVAMATHYRLALPGAKLGLPEVNLGLLPGAG
GTQRSPRLMGALPAAELMLSGKHLSAKAALAAGLVDKLVEGDDPVAAGLAYVRELLASGTQPRRTCDLEV
ADKAAALAALDQLAQDTAKKTRGLFSPAKIIECVKAAVQMPFAEGVKRERELFLECLNSPQRAGLVHAFF
AERETAKIPEAKAAAPRHFAKLAIIGGGTMGAGITVAALDAGLSVVMIERDAESIARGRKNVEKVYDGLI
AKGRMTAEAKAATMARYQPSTSYDDIKDVDLVIEAVFEDIEVKKAVFKELDRVCKSGAVLATNTSYLDID
AIAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVVTAFELAKRMKKVPVRAGVCDGFIGNRILS
VYREAANYMLEDGASPYEIDAAVREFGYPMGPFQVSDLAGGDIGWATRKRKAATRDPRARYVEIADRIAE
RGWYGQKTGRGWYLYPEGARTGQQDPEVLAIVDAERTKKGITPRAFTHEEIMRRYMAAMVNEGAKVLEEG
IALRPLDIDVTFLFGYGFPRWRGGPMQWADMQGLPKVLADIEAFAKEDALFWQPAPLLKKLVAEGRNFAS
LNQRG
>gi|319764428|ref|YP_004128365.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MDLQSLTLLVEIIDSGNLSQAARKLKMTRANVSYHLTQLEKSAGVQLIRRSTRRVEPTEVGLRLYEHGLA
IRNEVLAARETVTSLGQGLLGRVGISVPSGYGQMVMSDWLIEFKRLYPGIVLDVLFENRADHLRDEVDIV
IRVIPEPPLSVIARSLGPMRYVACASRAYVAEHGLPATLYELRNSPVITAGVIGHQLRLSAYQGKERQEV
LLEPTLISEHFPFLRQGILAGLGVGLVPDYVVQAEVASGEVLLALQEYRLSIFGSHMYLMYLPGRHQTRA
VRTCIDFLMAKAGHGASPVLTQ
>gi|319764429|ref|YP_004128366.1| transposase [Alicycliphilus denitrificans BC]
MSTLMDEEIKRWTAKRKTALILEIIQGKTSVAEASRSYDLAPSEIESWVEDGRKGMENALKANPQDVREQ
YERQLKDLQEAYGEAMLELRARKKLQSLLGEDEK
>gi|319764430|ref|YP_004128367.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MNKSPKFSPEVRERAVRMVQEHRADYPSLWAAIESIAPKIGCVPQTLNDWVKKAEVDSGQRPGTTTADAL
RIKVLEREVKELRRANDILKTASAFFAQAELDRRLKS
>gi|319764431|ref|YP_004128368.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MKAYIDRHRDDYGVEPICRALQMAPSCYWRHAARQRNAQLRSARAQRDEGLKADIQRVWHANWQVYGADK
VWLQMNREGIVVARCTVERLMRAMGLQGARRGRAVRTTTPDTSAPCPLDHVNRHFHASRPNELWVSDFTY
VSTWQGWLYVAFVVDVYARRIVGWRVSRSMQTDFVLDALEQALYDRQPAAHALTHHSDRGSQYVSIRYTE
RLDQAGIQPSVGSRGDSYDNALAETINGLYKAELIHRRGPWKTRESVELATLQWVHWFNHVRLLTPIGGI
PPAEAEANYWRQLAASDTSTKVST
>gi|319764432|ref|YP_004128369.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MVVQTLVDEHGMSERRACQASGIARSTLRYRAVARDDSGVIAFIQTHMALNPRHGFGLLYDSARHQGKPW
GKTVLWRVYCELRLNLPRRGKKRLPARIKQPLQAAGQPNQGWSCDFMADALWSGRRFRTFNVIDEFNREG
LRIEVDTSLPAARVIRALNELVEVRGAPLSIRLDNGPEFIAHALAQWAQSKGIALNHIQPGKPTQNAYVE
RFNKTYRTEVLDCYVFDSLQEVRDMTADWLHRYNHHRPHEALGRIPPVEYRVKLFPNLYF
>gi|319764433|ref|YP_004128370.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MKKSRFSEAQIVGILKEVEMGAKVGETCRKHGISEPTYYKWKSQFSGMTVSHLAQLRQLQDENAKLKRMY
ADLALMHHALKDVVDRKL
>gi|319764434|ref|YP_004128371.1| glyoxalase/bleomycin resistance protein/dioxygenase [Alicycliphilus denitrificans BC]
MRIGIGALHFYDQAPRELRRNAIHHLGMQVVGLQDLYDRMKAAGVHLPNPIRHSKGGGYFMLEAPDQVLI
EAFEPGSERDPNVLAYYGYR
>gi|319764435|ref|YP_004128372.1| transposase is66 [Alicycliphilus denitrificans BC]
MVIDEQALSELDAEQLREVTQRLLAELRHQRALNEKLTYECALLKRLKFAAQSERHSADQKSLLEDEIDA
DLAAVAVEIEQLQPPAAAPEAKQQPKRQPLPAHLPRREIRHEPESTTCACGCRMQRIGEDVAEKLDYVPG
VFTVERYIRGKWACTQCETITQAPVEAHVIDKGIPTAGLLAQVLVAKYQDHQPLYRQENIFGRAGLAIPR
STLAQWVGTCGARLQPLVDALKAEVLGHRVLHGDETPVAMLKPGSGKTHRAYLWAYAPGAFEATRAVVYD
FCESRAGEHARAFLGDWRGSLICDDYAGYKASFSQGVTEAGCLAHARRKFFDLHAAGKSQIAELALMQFA
RVYEIERQVQPLAAPERLQVRQQHSRPILDALHQWMVLQRQQVAGNSATAKALDYSLKRWAALTRFVDDP
QLPPDNNWIENQIRPVALGRSNWLFAGSLRAGQRAAAVMSLIQSARMNGHDPYAYLKDVLTRLPTHKASR
IEELLPHRWQPIDI
>gi|319764436|ref|YP_004128373.1| is66 orf2 family protein [Alicycliphilus denitrificans BC]
MIRIDEAWLATTPLDMRAGTDTALARVIATFGAAHPHHAYVFANQRANRLKVLVHDGVGLWLAARRLHQG
KFVWAPAGSPNVALEHAQLNALVLGLPWQRVGSQGAISVV
>gi|319764437|ref|YP_004128374.1| transposase is3/is911 family protein [Alicycliphilus denitrificans BC]
MLKDPQTPRYAQRRTHRTYTPQFKAELVAACRQPGASVAAVALQHGMNANVLHRWLKEWAQGFHRLEAGV
STAVVASPPPAFIPIDLSAVPPASAGELPSASLPTPADGIRIECQRPGMSVTVHWPLSGAAECAQMLREL
LR
>gi|319764438|ref|YP_004128375.1| peptidase m48 ste24p [Alicycliphilus denitrificans BC]
MKRIALFLLTNVAVVVVLGIVASLLGVNRYLTANGLNLGALLGFAFVMGFGGAIISLLMSKPIAKMSMGV
QIINAPRNADEAWIVETVRGFADKAGIQMPEVGIYEGEPNAFATGAFKNSALVAVSTGLLQGMTREEVEA
VIGHEVAHVANGDMVTMALIQGVMNTFVVFLSRVIGYAVDSFLRRNDENSSGPGIGYMITTIVLDIVLGF
LAAIIVAWFSRQREFRADAGAAQLMGRKQPMINALHRLGGMHPGQMPQSLQAMGITGNIGKLFSSHPPIE
ERVAALQNLR
>gi|319764439|ref|YP_004128376.1| transmembrane protein [Alicycliphilus denitrificans BC]
MAAGGVSCPPAQPCLDAIDWRRPWLAPLASMGQRVAARVQAGAGVADALNALIDEGAAPPPGVRFVPQAA
LPPGMAYEQFIHAEGRVPTRDNLHDFFNGLVWLHYPAAKRRFNRLQAGVIAAEGVGAVRGPLRDALTVFD
ENGAVLLAPPALHEALAARQWRRLCVELRPLWRQARLLLIGHALLEKLVSPRKQVTAHVYKAHAATESVV
DVDGWLAAGLSAQRLAAKPFNPLPVLGVPGWWPENENFCFYDDSLVFRSARTA
>gi|319764440|ref|YP_004128377.1| dihydroorotase, homodimeric type [Alicycliphilus denitrificans BC]
MTAAHRPDTLTITRPDDWHLHVRDGDPLHTVVPHTAAQFGRAIIMPNLRPPVTTAAQALDYKERILAAVP
QGVSFEPLMTLYLTDNLPPDEIAAARDAGVVACKLYPAGATTNSDAGVTDMRKTYATLEAMQKAGLLLLV
HGEVTSSDIDLFDREAVFIDRQLIPLRRDFPELKIVFEHITTREAAQYVADSDAYTAATITAHHLLYNRN
AIFTGGIRPHYYCLPVLKRELHRQALVQAATSGSAKFFLGTDSAPHPAHLKEHATGCAGCYTAHAAIEMY
AEAFDNAGALDRLEGFASFHGPAFYGLPRNQGTITLRRESWMPPDSFPFGEADLKPLRAGEALPWRLVG
>gi|319764441|ref|YP_004128378.1| hypothetical protein Alide_3781 [Alicycliphilus denitrificans BC]
MDKTTPPHHVRIKRAYEPPATEDGARILIDRLWPRGVKKETLALTEWAKMLAPSTALRQWFNHDPALWDE
FRRRYAAELRAQRPAFDALRERARHGVVTLVYSAHDETVNNAVAMRGFLLQRGGLDAVD
>gi|319764442|ref|YP_004128379.1| alkylhydroperoxidase like protein, ahpd family [Alicycliphilus denitrificans BC]
MTQRLDYKNASPKGFAAMLALELHARASGLEHGLLELVKTRVSQLNGCAFCLDMHTKDARAAGESEQRLY
LLPAWREAPCYTERERAALAWAEAVTLLKDQQVPDEVYEQARRQFDEKALVDLTLAIVAINGWNRLSVSF
HTEAGSYQPGRH
>gi|319764443|ref|YP_004128380.1| excinuclease abc, a subunit [Alicycliphilus denitrificans BC]
MTQGLIRIHGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFSAYARQFLDRM
DKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARAGQLFDRKTALPVRHDSPDTIYAE
LQRRCAAEGDPRIVLTFPVELPAGITAEQLEQWLSASGFTRVQAERERDGRKLLDVVADRFRMGGAERVR
VVEAIEVALKRGGGRLNVYRLRDESESELWRFSTGLHCPESDLRYAEPIASMFSFNSAVGACDTCRGFGR
VIGVDWGLVVPNEKLTLRAGAIKPIQTPAWKECQDDLMRHAEAAGIPRDTPWYKLTAEQRQWVIEGTPGF
KEGNWNRQWYGIRRFFAYLESKAYKMHIRVLLSKYRSYTPCPVCAGARLKTESLLWRIGSKEDADTVLDP
ARRFMPQGVQWTRAQLEALPGLCLHDLMMLPIERLRRFFARLGFAPAQGKDAGPGEGERQALQLLHEEIS
TRLKYLCDVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDMHRITEAMLRL
RDAGNTLVVVEHDPAVMLAADRILDFGPGPGERGGRIVFDGTVGELRRAPTLTGQYLGGRRHIGTGLKRL
VTDSTPRLILEGAREHNLQGLTVEFPLQRLVTVTGVSGSGKSTLIQDVLAPALMRHFGKATESPGAHDRL
LGADHLSDVVFVDQSPIGKTARSNPVSYVGAWDAIRELFAVAPLARERGYTAAKFSFNSGDGRCPSCGGS
GFEHVEMQFLSDVYLRCPDCDGKRYRPEVLEVRIERGGRLLNVADVLELTVHEAAEAFAGDREVIRALAP
IVDVGLEYVRLGQPVPTLSGGEAQRLKLAGFLAEAARTQAKSRQPVARKGTLFLFDEPTTGLHFDDIAKL
MRALRKLLDAGHSLIVIEHNLDVIAASDWLIDLGPEGGDAGGQLVAEGAPEEVRRHPHSHTGAALREYEQ
ALGEGGHSVHEQRAVLRKEKLLALDGKALDAKNAIEIVNAREHNLQHLTLDIPRGRFNVITGVSGSGKST
LAFDILFNEGQRRYLESLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTTTEVWHFLR
LLYVKLGVQHCVHDGAAVQPQTMESIAAQLLTQFRGQHIGLLAPLVMNRKGVYTELADWARPRGYTHLRV
DGNFLPTAGFPRIDRFKEHTIELPVASLHVSAEKEDALRAQLAKALELGKGVVHVLSHLDGLQEALQDGA
PTAHIGRLQVFSTKRACPVCATSYAELDPRLFSYNSKHGWCPDCVGTGVKLTKEQRKAFDDSVQSDDRGR
EQTFAEPEVEDLADLACPACQGTRLNPVARAVRFAGTAITEVAHLSVSEVRQWIAGLQLSGRMTQRDNDI
ARDLVPEIQSRLEFLEEVGLSYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHARDNQ
ILLNALHKLGDKGNTLVVVEHDEDTIRRADHIIDIGPSAGKRGGRLVAQGTVADVQAAQDSQTGRYLLHA
MRHPLQVRRVVDAPEKGAADARQKIVSDIKTSENKEEKALAATKTEAARPLAWLTVLGACLHNLRDIDAR
VPLQRLVAVTGVSGSGKSTLARDVLLANVAAWVGQRATKAGREAMDAGKAPALVGCKGLQGFETIDRVLE
VDQTPIGKTPRSCPATYIGFWDTIRKLFAETLEAKARGYAPGRFSFNTGEGRCPGCEGQGMRTIAMSFLP
DVKVPCEVCHGARFNPETLAVTWRGKSIGDVLQMEVDEAVEFFASMPSIAHPLQLLKDVGLGYLTLGQPS
PTLSGGEAQRIKLVTELTKVRDDVGRRGQKAPHTLYVLDEPTVGLHMADVHKLIKVLHRLVDGGHSVAVI
EHDLDVIAEADWIIDLGPEGGKDGGTIVAAGTPEDLVRLGTHTGQALAPVLARA
>gi|319764444|ref|YP_004128381.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MQAWQKWGAALALGALLGTAQAQILVGQTAGLSGVVGPGVQETAAGARLFIDAVNAKGGVHGQKIELIAM
DDKFDPKTAGENARVLIEDKKVHVMFLTRGTPHTEAIIPHLDKHGVALVGPSTGAMVLHQPVRKHVFNVR
ATYQREAEKAMAHLASLGMTRIAVLYADDSFGADGVAGAQKGLAQARLEPVVLEKFNRAQPDFAPPAAKI
AQAQAQAVMIIGSGTTVVDGYAALRKAGSTAQLVTLSNNASNGFIKSLGEHARGVIVSQVFPNERSLGYP
MVREAIELNKARGQGEVSPAMLEGFAAAKVLVEGLRRAGPKPTREKIQSALESIQQLDLGGLLVSYGEND
HTGLDFADLSIIGADGKFRR
>gi|319764445|ref|YP_004128382.1| hypothetical protein Alide_3785 [Alicycliphilus denitrificans BC]
MWKLVLGFVVFAVIALFVIMKAGDQVDMSGEKHGVEAVHAPEPAAAPASAASAAQ
>gi|319764446|ref|YP_004128383.1| porin [Alicycliphilus denitrificans BC]
MQKPSRLLLATLALLGTSAVFAQSSVTLYGRINTTVERQKDGGVSTTGMFNNASRWGVRGTEDLGGGLKA
GFQLESGFASDTGTGTGWPGLATVGNGLNFGRQSEVNLAGGFGMVRLGNFVPESYYATADYVSMHNHDTG
SSSDALYYDPVWFGGLGTKNKIGYRTPSLGGLTVDAAVLLHERAAGTNDKNGYDLAANYNMGPLHLGLGY
SSVDSNYQVGLRALYTFGQFTVGGYYQRNKDDNQIVTTGAGTRNNFRLSGMYALGASEFHVNVGHANSWS
NVNDSDATQWTLGYNYNLSKRTKVYTYYTRVNNGNNAGYNVTNSGSDFSSFALGVRHNF
>gi|319764447|ref|YP_004128384.1| major facilitator superfamily transporter [Alicycliphilus denitrificans BC]
MAINAAQGVGRGAAHRPMTTEEKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFSGLDAGAAFIFALLA
FAAGFLVRPFGALVFGRLGDMIGRKYTFLVTILIMGISTFIVGVLPNYASIGVAAPIILIALRMLQGLAL
GGEYGGAATYVAEHAPHGKRGAYTSWIQTTATLGLFLSLLVILGTRTVMGEPAFNDWGWRIPFLVSILLL
AVSVWIRLSLSESPAFQKMKAEGKTSKAPLSESFGQWKNLKIVILALIGLTAGQAVVWYTGQFYALFFLM
QQLKVDAVTANLMIAAALLIGTPFFVVFGSLSDKIGRKPIIMLGCVLAVLTYFPVFKALTGAANPDLAKA
QATAGVSVTADPATCSFQGNPVAREIDFKSSCDIAKRYLVQNSVSYENVAGPAGSPAVVKIGDKTVTAPT
GTVVNHKFDEESAKAIAAFKKEMGEDLKLAGYPTKADPAKMNKPMMIAILVYLVILVTMVYGPIAAMLVE
LFPTRIRYTSMSLPYHIGNGWFGGLLPTTSFALVASAGNMYSGLWYPIVIAGMTAVVGTLFLRETKDVDI
YAND
>gi|319764448|ref|YP_004128385.1| hypothetical protein Alide_3788 [Alicycliphilus denitrificans BC]
MSDPAVEKIQRHPKYQELRARRNPLSVVLTVLMLVVYYGYIGLIAFDKPFLAKPIGDGVTSLGIPIGMGV
IVFTIAITVYYVRVANKKFDALTEELLKDVTK
>gi|319764449|ref|YP_004128386.1| sss sodium solute transporter superfamily [Alicycliphilus denitrificans BC]
MKRIQIAASSTLALASLWAANAAHAAGGDLGQAAKQETNWTAIVMFAIFVAGTLWITKWAASKTRSAADF
YTAGGGITGFQNGLAIAGDYMSAASFLGISAAVMASGYDGLIYSIGFLVGWPVITFLMADRLRNLGKFTF
ADVAGYRFAQAPIRMFAASGTLIVVAFYLIAQMVGAGQLIKLLFGLEYWMAVVIVGALMMVYVLFGGMTA
TTWVQIIKACLLLAGVTFMAFMVLANYGFSPEALFAKGVEVRTQIAANAGKTPEEAARAGLSIMGPGGFI
KDPISAISFGMALMFGTAGLPHILMRFFTVPNAKEARKSVGWATVWIGYFYILIFIIGFGAITMVLTNPE
MSDTVKGVIKGGAGTANMAAVLVAKSVGGNIFYGFISAVAFATILAVVAGLTLSGASAVSHDLYATVIKN
GKADSAAELKVSRITTLALGVIAVLLGIAFEKQNIAFMVSLAFAVAASANFPALILSILWKGCTTRGAVI
GGFLGLISSVGLTIVSPSVWEATLGNPAGSALFPYSSPALFSMVIGFVGVWLFSITDGSARAAKEREAFA
AQQVRSETGLGASGASGH
>gi|319764450|ref|YP_004128387.1| exonuclease rnase t and DNA polymerase iii [Alicycliphilus denitrificans BC]
MSRHYASLPPLWWERLRRWWLVYHLGEPEFAFMFDPPPPGEWVALDCETTGLNPRTDEIVSIGAVRIVGE
RILTSERLELLVRPEKGVSAGSVRIHRLRERDLAGGIPRDEAMRRLMHFIGSRPLVGYYLEFDVAMLGRA
IWPLLGMGLPQRKIEVSALYYDYKFRQLPPYQQQANADIDLRFSTLMRDLQLPEREAHDALNDAVMAAMA
FIKLRRLRGEV
>gi|319764451|ref|YP_004128388.1| hypothetical protein Alide_3791 [Alicycliphilus denitrificans BC]
MPNAFNFSASPFDCLSAEEQALVRDSVDIAYYPQGAVVLDVGDAPAWLFVVIKGYVTQTEGDEQLATYGP
DDCFDGRGLVAGRVSSRFAVAEELVAYQLARATVMDLIARNRAFGALLFSDLGQKLSALAQRAQQHQMQS
LTLARVDQAFLRPAHVVPAGTDIVAVVRLFQSQRTTSVLVSGLQGGLGIFSNTTLQRAVLDGRPLAQITV
GELASHPVITVRAGDQLGDAMALLLRARVHRLAVLGEDGQVQGILEALDLFSFLANHSHLITVQIEQAAD
LQALEAAAAQITRLLAALHRGGTRIALMAQLVQQLNARLFERAWQMIAPPGLVANSCLFVMGSEGRGEQL
LKTDQDNGLLLRDGYEPPADLQAVCERFSAALARFGYPECPGRIMLSNPAWRASVSGFGLKVRDWLLQPQ
GDSLMHLAIFMDAHAVAGDAQLLADVRQRLMQLATDNDALIARFALAIDAFGGPAGWWNRLLSLGDAEPM
NLKKAGIFPIVHGVRSLALARRIAATGTAERIAALQAEGQLDAALAQELVQGLHFLMGLRLQAGLAEQEL
QRPVTGNVDPARLSTLERDLLKDTLLVVKRFKALLHQRLRLDAA
>gi|319764452|ref|YP_004128389.1| dsba oxidoreductase [Alicycliphilus denitrificans BC]
MKEITFYLDFVSPYAWLAFERLPQALEGLSYHLRYRPVLLGALLKQHTNPGPAGIAPKRAWTYRHVSWLG
HSLGVGLDMPARHPFAPLPLLRLALECSGDGFVNRFVAGTILRHVWQGGADALDPARLDALRAALADQLR
QDEDAPERAKRLLRENTEAAAAGGVFGVPAFEVEGRLFWGLDSLPMLRACLDDDAWFDQHWERAASVPQG
LGG
>gi|319764453|ref|YP_004128390.1| hypothetical protein Alide_3793 [Alicycliphilus denitrificans BC]
MSAAKMLADRAFQISAAGQFGLKSEEPVPSPCVSVCRMAPDRSHCEGCFRTLDDIRAWSQAGNGQRRAIW
AAALRRAGLALPEELE
>gi|319764454|ref|YP_004128391.1| ybak/prolyl-tRNA synthetase associated region protein [Alicycliphilus denitrificans BC]
MCGAELQALPEGVRRVAAALQAAGHPHMPVMLDDAARTAQQAADALGIAVGQIAKSIIFRRKSDDAAVLV
ITSGDRRVHEKKVDALVGKTGRADAEFVKARTGFSIGGVSPVAHATAPVTLIDRELFRFGVIWAAAGHPH
GVFQLRPQDLEALTGAPVADVVQE
>gi|319764455|ref|YP_004128392.1| pyruvate carboxyltransferase [Alicycliphilus denitrificans BC]
MNPNIPTRVKLIDVGPRDGLQNEKQPVPADVKIGLVHRLQDAGLKEIEVTSYVSPKWVPQMADNHEVMAG
IARRSDVRYSVLTPNLKGWEAAVLDKPDEIVVFGAASEAFSQKNINCSIAESIERFAPVVEAARAAGIQV
RGAMSCTVGCPYEGEVAPERVAYLAGLLKGIGVQRVDVADTIGVGTPRKVQRAIEATLKHFGIDDVSGHF
HDTYGQALSNTLAALELGVWNFQSSVAGLGGCPYAKGATGNVATEDLVYMLHGMGIETGIDLDRLVDAGA
YISDFLGRKPQSRVAVALLNKRAG
>gi|319764456|ref|YP_004128393.1| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MKITFCCTDTKAEPWLQGLAAALPQAHVSAWQPGAPQADYAVVWAPPQRFIDEQPGLKALFNIGAGVDAL
LGLRLPPALPVVRLDDAGMAVQMAEYVCHALIRHFREFDGYEADMRAGRWGYRRPRLRQDFPVGVMGLGV
LGERVARAVAQFEFPVMGWSRGPKRIEGVRCFSGAEGFGGFLAASRVLVNLLPLTPGTRDIMDRGTLSRL
MPGAYVINVARGAHLVDEDLLALIDEGHVAGATLDVFRTEPLPAGHPFWNNPRITLTPHTSARTLRDESI
AQIAGKIAAMQRGEPVAGIVDAARGY
>gi|319764457|ref|YP_004128394.1| carbamoyl-phosphate synthase l chain ATP-binding protein [Alicycliphilus denitrificans BC]
MFNKILIANRGEIACRVAATARRMGVKTVAVYSDADAQAKHVAACDEAVHIGASAPKDSYLRWERIIEAA
KATGAQAIHPGYGFLSENEDFAKACQSAGLVFIGPPASAISAMGLKAESKRLMAKAGVPLVPGYQGEDQD
PQLLQREADAIGYPVLIKASAGGGGKGMRLVEKSEDFAAALASCQREAINSFGNDAVLVEKYVLRPRHIE
IQVFGDTQGNCVYLFERDCSVQRRHQKVLEEAPAPGMTPQLRQKMGEAAVAAAKAVGYVGAGTVEFIVEQ
PGGYDQPEAMKFYFMEMNTRLQVEHPVTEAITGEDLVEWQLRVASGQPLPKRQDELRITGHAIEARICAE
NPDNNFLPATGRLDVYRKPACTSFERSMVRVDDGVREGDAISPFYDSMIAKLIVHGDTREQALARLDDAL
AQTHIVGLATNVQFLRHVAGSDAFARARLDTALIQREEAVLFGQEKVGLPLAAAAAVASQLQREQAGQGA
DPFSRRDGWRSLIPCRRRFEFDFGGQHAKAWLTYERDGGYGLEVGEGEAAVHGPLAFAPAAGGGMDLQYA
GQRTQAVVHAQGETDHIFTPRGATRIEALDLLAHAGESASEGGRLTAPMPGKVVSFAVQAGDKVAKGQAL
AVMEAMKMEHTIAAPADGVVAELLYAPGDQVTEGAELLRLSAA
>gi|319764458|ref|YP_004128395.1| transmembrane protein [Alicycliphilus denitrificans BC]
MDALWSQIVQWLHRVGLHVDAGTAQAVADGAARATQQLDMPGLLALAAALGWASGVRLYAVVFIVGGMGA
LGWLALPPALAVLQHPAVLMASGFMLVVEFFADKVPWLDSAWDAVHAFIRVPAGALLAAGVFGASDASMA
VAAGLLGGSLSAAALATKMTARAAANTSPEPFSNWGLSFLEDGLVVGVVWLATQHPLAFGLALAVVLLLS
ALLLVVLFKFLRAVLRRVSSLFSGSAKVA
>gi|319764459|ref|YP_004128396.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MSALSIRYEGHRATITLTQPEVRNAFSDEVIAEITAAFREVGAREDVRAVVLAAEGPAFCAGANLNWMRR
MADYTREENLADAGKLAEMLRVIYECGKPTIARVQGDVYAGGMGLVAACDMAVAADTAGFCLSEVKIGLI
PATISPYVIRAMGARAAHRYFLTAERFDAQEALRIGFVHEVVTPDQLDARVDALVKALASGSPNAMRAAK
RLVLQVAGREIDAGLIAATVEGIADIRASSEGREGVQSFLQKRKPSWLA
>gi|319764460|ref|YP_004128397.1| methylcrotonoyl-CoA carboxylase [Alicycliphilus denitrificans BC]
MILESQLNPRSADFQANAAAMRAVVEDLRQHVERVAQGGGEAARAKHVARGKLLPRERVEMLLDPGTPFL
EIAPLAALNMYGNDAPGAGLIAGIGRVSGIDCMVVCNDATVKGGTYYPVTVKKHLRAQEIAEQNHLPCIY
LVDSGGANLPNQDEVFPDRDHFGRIFYNQANMSAQGIAQIAVVMGSCTAGGAYVPAMSDETIIVKNQGTI
FLGGPPLVKAATGEVVTAEDLGGGDVHTRLSGVADHLAQSDLHALALARAAVANLNRNRPAAPADTAPEA
PKYAAEELYGVIPADTRKPFDVREIIARIVDASAFDEFKARYGTTLVCGFARIEGMAVGIVANNGILFSE
SAQKGAHFIELCCQRKIPLVFLQNITGFMVGRKYENEGIARHGAKMVTAVATANVPKFTIIIGGSFGAGN
YGMCGRAYSPRFLWMWPNARISVMGGEQAASVLATVKRDGIELKGGSWSAEEEEAFKAPIRQQYEKQGHP
YYATARLWDDGIIDPADTRRVLALALAASRHAPIPDMKFGVFRM
>gi|319764461|ref|YP_004128398.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MESVHPSSAAPSHARGATGTPLIEQTLGDFFAGMARRQPDHEALVSRHQGLRYTYAELHRESLRLASALL
GLGLAPGDRIGIWSHNNAEWVLMQLATAQVGLILVNINPAYRTAEVEYALNKVGCKALVTMPSFKTSDYL
GMLRELAPEMALCAPALLAARRLPTLRSVVWIDVAGEGGEQPGALRFSELMARGDAQDARVAAIGATLKH
TDPINIQFTSGTTGFPKGATLTHRNILNNGFFIGECMRLTPSDRLCIPVPLYHCFGMVLGNLACITHGAT
IVYPSDGFDPLRVLETVQAERCTGLHGVPTMFIAELDHPRFAEFDLSTLRTGIMAGSPCPIEVMKRVQAD
MHMAEVTIAYGMTETSPVSCQSDTDTPLEKRVSTVGRVQPHLEVKIVDPETGAVVPRGGRGELCTRGYSV
MHGYWGDPEKTREAIDADGWMHTGDLATMDGEGYVNIVGRIKDMVIRGGENLYPREIEEFLYRHPQVQDV
QVVGVPDEKYGEELCAWIIAKPGTNPTEDDIRAFCKGQIAHYKVPRYIRFVTGFPMTVTGKIQKFKIRDA
MKDELGLQEGKTA
>gi|319764462|ref|YP_004128399.1| helix-turn-helix- domain containing protein arac type [Alicycliphilus denitrificans BC]
MTETHRTASRARAPTAATPMAFVQAIVRAYAARGMDASRVLEQAQITPADALDAAARITSQQMEQLSAGA
MRELDDEALGWFSRRLPWGSYGMLARASLSAPTLGLALARWCRHHALLTDDVLLHLTSEGGRARLAISEQ
RDLGGLREFCLVSMLRNALGLSSWFIDSRLPMAAAEFPFAPPPHAPAYAVLFDGPMRFGAAQAAVYFDAR
YLALPLTRDEAAMRQMLQHALPLMVRQYRRDRLLVQRVRQLLAGAPDAAHNAHALADRLHVSTRTLHRQL
KEEGASLQALKDEVRKSRAIELLRRTRRPVKQVAEASGFASEKSFIRAFRGWTGQSPADFRRHGAWPDRS
PA
>gi|319764463|ref|YP_004128400.1| glutathione s-transferase domain protein [Alicycliphilus denitrificans BC]
MIELYHCVSARSFRPLWMLEELCVPYRLRMLPFPPRVHARQYLEDNPLGTVPLMKDGATRMTESAAMCQY
LAARHGDGRLDVAAGDPAHGSYLNWLHMSDATLTFPQTLVLRYTHFEPAERRQPQVAQDYARWFLARLRA
VDAAVQQGGFLCAGRFTAADVAVGYALQLAQHLGLAREFPHAVAGYWQRLQERPAFERALQAQHRAALEQ
GVDPTPSPDLR
>gi|319764464|ref|YP_004128401.1| choline dehydrogenase [Alicycliphilus denitrificans BC]
MSTPDTFDYVIVGAGMAGCLLAHRLSEDGRHSVCLLESGPPDRSPFIHIPAGFIKVGYDPRYTWDFETAP
GEGTAGRRVTTRLGRTLGGSSAINGFNYTRGTARDYDGWAAQGNPGWSYDEVLPHFRRTERRIGGGDEPH
RGHDGLLPITDCDWRHPLCDGFIASAHALGIGPAGDYNLGVQEGAGYYQRWIHKGRRVSAATAFLKPVRA
RANLQVRTGAHATSVLFEGRRAVGVQVLMQPGNARHTVRARREVILCAGAINSPKLLQLSGVGPADWLHG
LGVAPVHVLPGVGRRLQDHFMVRSVVRVQGATTINSTARGWSLGLEIAKWAMGRPSVLAISPSVAYAFAA
SRPGLDAADLQFHFSPGSYASGIAGRLDGFAGMTLGFYQMRPASHGHVRALSPDPLESPEIQPAYMAREE
DRRVVTDGLRLTRRILHAPPLLPYVLRDEAPPAEAVSDEDLLEYARQRGGTAWHFMGTCRMGPAQDASAV
VDAQLRVHGLEGLRVADASVMPAMPSGNTGAPTMMIAEKAADMLLRA
>gi|319764465|ref|YP_004128402.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MTGIRRIAQAATAALSLACAFTAQAQDVIKIGYTADQSGSGVAELGIAGRWGFEAAIEDVNKAGGILGKK
VVGVIRDDQGTPPKAIQTVQDLLDSEKVQALVGPANSGNALAWLHIPQQKKIPVVVPIGTATEITTRYAK
EPQNYLFRISMVDREQVSLLAAYAVKASKGKKIAVLADSTGYGQGGIKDATEVLALHGVKPVAVEKYGPK
DTDMTSQLNKIKAAGADTVIIYGIADGAAQVVRSMEKINYMPITLGTWGNLSSLFPKMTGPKLSEHLIMA
ASTTEDTSDKTKSLGERVRKNFAALTCFPCAAQAYDSVMLLSAAMKQANTTDGEKVAAALENLSGVKGVI
KTYDKPFSKTMHEGLHVGDFYLARWKNGTEVQRFQDDVYKSITPADLKQ
>gi|319764466|ref|YP_004128403.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MAESILQAIFSGLALGSIYALVAVGFNITFNTTKTLNFGQGEFLVAGAFVAVSVLLLLAGKQMTDALLPS
EVTLTRYLLSLAGSMAVLALLGVLLYYTAVRPFVGQGGMAWVMSTIGFGIIIQNTALAIWGPSPLVMPSP
LGNDVIRIGGAGVLPQEVLVLVASVAVLLTLDWVMRATRIGKAVRAVAQNGSTATLMGINVGAIVVLAFV
ISSSLAGLAGLLIAPITTASVFMGLTLALKAFSSAIVGGLTSPRGCMLGGFLLGVIEALVGLWHAELREI
SIFILIIVVLVVRPQGLLGQRIVEKV
>gi|319764467|ref|YP_004128404.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MTAERKHTLWLAVVAALAAAVPLATDNDFHLRVLFLIGVNYIAAAGMNVLVGYTGQKSLGHAGLFAVGAY
TVALLTARWGWNPWPAFVAAGVMAGIFGVVIALPALRVKGPALAMVTIGFGIVVEKIVSEWQDVFAGQQG
IYGVLPLSLGGTMFSSKQWVWFVLLLGVALHVMLRLLLRGRFGRAFMAVNTAEVAAESVGISVYRFKVLA
FVISAVTCGLAGALIAQQNQYINSDFITFNLSIFILLMVLFGGHSVYGPLLGAVVLTLLDSFLSRWPGVQ
HFTYGALLLFALYAMPDGLAGFVRQMARKWAPGLLPAEALPAQLAPWRLRSGTGAETMLLEAQGLYKAYG
GVVPTNEVDLSIRAGHVHSLIGPNGAGKTTLLNILSGIVPPDRGSIRFEGRDVTGLAPYRIARAGLGRTF
QNLKLFAGMSVLDNVKLGLHAHIPTGFLGSLLGRGGHAERAARDEALQILDWLGLKDKAQEIAGSLPYGV
QRRLELARALATHPRLLLLDEPAAGLNPQETQELAQVILRIRDLGITVLLIEHHMDLVMAVSDHVIVLDY
GQKIAEGAPAQVQNDPRVIAAYLGADDGTQEEEEEDEEGGAHVQ
>gi|319764468|ref|YP_004128405.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MSNELLRIDGLHVHYGAVQALKGVSLHVQAGEVVTIIGGNGAGKSTLMRCISGLEPAAGGRVVFEGQDLA
AIPGHRRVALGIAQSPEGRQVFADQSVRDNLLLGAYHRRASAAEIEADIQAQFERFPRLGERQQQMAGTM
SGGEQQMLAIARALMARPKLLLLDEPSLGLAPLIVKEIFDTIRGLRTQGVTILLVEQMANQALAVADRGY
VLETGRITLQGPGRELRRDPKVRAAYLGGH
>gi|319764469|ref|YP_004128406.1| glucose-methanol-choline oxidoreductase [Alicycliphilus denitrificans BC]
MQESFDYVVVGAGAAGAIVARRLAEDPAVTVCLLEAGPPDRHPYLHLPAGFIKMLFDPAYTWTYGSEPDA
RTLERRVPLPQGKTLGGSSAINGLIYNRGQAEDYDGWAALGNPGWSFAEVLPYFQRNERWLGPAGSARRG
TSGRVPVTPIDWTHPVCEAFITGAQELGLPRNPDYNGDTQAGAGYFQRTIHRGWRQSTARAYLRSPGSNL
AVRTHAQATRIVLDGTRAAGVEYAHGGPQGSAKAVGARREVVVCAGAINTPRLLQLSGIGPADQLQALGL
PVVHHLAGVGTHLKDHFSVRVVGRVRRGSAVTINELARAPRLWGQAARWLAGRPSILALSPSLVHFFWHS
GLGDGLRPDLQGVFTPASYREGYVGQLDTYPGMTCGVWAHRPRSEGEVRLRSADPWAEPLIRPNYLSHEE
DVRVLTAGVRLARGLLRTQALAPFFEDEAMPGADAQSDEDILAYIRRYGVSSYHLCGTARMGPSPEEGAV
VDAQLRVHGLQGLRVADSSVIPAIPSANICAATMMIGEKAADLIRS
>gi|319764470|ref|YP_004128407.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MLVPHESATIGGVLLEAAAAFGARPLLVAPPNAARGYDPEGRTITYAQAAQAVQGLMDRYREAGYGAGHR
VALLLENRLEHMLHKLAMNALGICCVPVNPDYRPRELAYLIDHAHVDLAVVLQSRQADWQAGAREAAWQP
PAVVFEQFDAALPPAPAPATHWTPGAGTPASILYTSGTTGRPKGCVLSHRYELAAGAYYATRGGLVDFRP
EGERIYNPLPLFHVNASILSFYAALLTGSCQIQTDRFQPTRWWQEVRDTRATIVHYLGVIVQMLCAQPPS
PGDTRHCVRFGMGAGVEPQLHAAFEERFGFPLLELWGMTENVRILVDCHPPRQVGTRAFGRSTPGIEVRV
ADDAGADVPDGTPGEMLIRHSAEAPRKDFFSGYLDDEAATEAAWRGGWFHTGDVVVRDATGMLHFVERRK
NIIRRSGENIAAADVEAWLVTHPDVDMAAVMAVPDEVREEEVLACIVLKPHAAQTLQKPGAEAALLRSLF
DHCSQGLAYFKAPGWIWFTGQIPTTGTQKIQKHGIFGAGVDPRTVAGMHDLRAWKKRRQAQG
>gi|319764471|ref|YP_004128408.1| aminotransferase class i and ii [Alicycliphilus denitrificans BC]
MSATPAPLFIALADSLERQIRDGVYRGGDKLPSLREIAASRGYGKNTVVSAFELLVARGLVEPRRGSGFF
VKEAVPEADGEAIEGHTLRRTMDIVWLLRTQLRNEPGQLAVGDAFPPSEWLAGARLDRTHHKVARGGLGT
LFRYGDRLGYAPLRHRLVRRLADVGIDAHPQQIVPTHGANEAMDLIVRYFVPPGGTVLIDDPGYYPLRGK
LHLAGARVVGVPRLADGPDLQALERLLKTLRPRLFFTQSLAHNPTGSDLSLPKARAVLRLAEQHNLLLVE
NDVLSDFRPATAPRLSALDGLERTLYLGSFSKSLSAALRVGFVACSADLAQELADLKVLTSISSSEYAER
AVETLLAERRYAKHLEQLRGRLAEATHNAYALLDRMGAEVFVRPVHSLFIWARWPGFPDAQALAQAMLGH
GIVMAPGNIFCVNSEQACPWSRCNPHAVQDPRFARALERLRG
>gi|319764472|ref|YP_004128409.1| hydroxymethylglutaryl-CoA reductase, degradative [Alicycliphilus denitrificans BC]
MTTIDSRLPRFRSMTVPQRLQHLAAAARLSDGEARLLSDSGALDPSLADGMIENVVGTFELPLGVAGYFQ
INGKDVLVPMAVEEPSVVAAASFMAKLARECGGFETSSTAPLMRAQVQVLGLTDPHGARQSLLRRRQEII
DLANQRDKVLTGLGGGCRDIEVHVLEQTRRGPMLVMHLIVDVRDAMGANTVNTMAESVSPLVEEITGGQV
RLRILSNLADLRLSRARVALSPEVLTTAEYDGRDVIERILDAYEFAAVDPYRAATHNKGIMNGIDPVIVA
TGNDWRAVEAGAHAWAARQGHYGSLTRWEKDARGWLVGSLEMPMPVGLVGGATKTHPLARLALKIMGVAT
AQELGETAVAVGLAQNLAALRALATEGIQRGHMALHARNIAIVAGATSEEIDRVARQMAQEKDVRTDRAQ
ALLAALRAKN
>gi|319764473|ref|YP_004128410.1| had-superfamily hydrolase, subfamily ia, variant 3 [Alicycliphilus denitrificans BC]
MTYEAILFDCDGVLVDSEPITNGVLCEMLNEAGWLLAPEECMRLFIGKTVRSETARIEARTGRPLTDAWM
AEFYARRNARLQAELVAIANAPEAVRAVHARLGGRIACASGADRQKVEMQLAQVGLAPLFAGRVFSGHEM
PATKPAPDVYLAAAAAVGVPPARCLVVEDTVTGVMAGVAAGATVVGYSTGDAGHGSPGALRAAGAARIIA
DMAELPALLG
>gi|319764474|ref|YP_004128411.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MKMLSVVLHQRMRPRAWWLLPAVALLLGGIGWGVYAIYQKREQRYRHQIESSMQAVNQLQLRAASDWRAR
RQSEAVALSQDSLFAQAVARWRAAGSPDGEVLLRERLRILVEQQRYTAAYLVDAQGRLLLDSEGVATGGL
PGPEQEALQRALAQAQPEIVELHRDPSFAFPVLGLLAPLFDGSTPLGAVWLVIDARTALFPLLETWPDHS
STTESVLVQREGDAVVTLSPLRLRSEEREPLRLPLAEGGRDPMALAAEGVRGAFYASDYRGQDVLAVASA
APDAPWLLVSKIDVAEAFTDAQRREWLMLSLFVSLGLLSLGSAVVFWQWRAWRRERALKGELERNLRWLE
NAQKAASVGYFLYDAGDEAFIMSRMASTIFGLPADGRMTLRQWVSMLHPDERAQTLQIHGRAMAQRTLLR
TQYRIRRAGDAQERWIEVWGEYSQASDAEPLLMTGTVQDITERKQTEEQLTRYRTALEAQVRLDPLTQVA
NRLALDEAVTHEWSRALREGAALALLMIDVDHFKAYNDYYGHVAGDQCLQRVTVALSSVLGRAGDLLARY
GGEEFAVLLPGADAPSALSVALRLEEAVRALALEHRGSECCGNVTVSMGVASLQPAQYAGGDGQARAGVD
AAQALFQQADAALYTAKQTGRNRVVLYGADCMAALHPSEWAPLTPARFQ
>gi|319764475|ref|YP_004128412.1| extracellular solute-binding protein family 5 [Alicycliphilus denitrificans BC]
MFPLVLTRRACLARSLALCAAPAIAGAARAQERAARRTVVINLSLEPDSLDPTMAPSAAVGEVVHYNVLE
GLTRIEEDGTVAPMLAKSWSVDATALHYTFRLHQGVRFHDGRPLDSAAVRFSFERAVAPGSTNKARKALF
DNIAAVTTPDAHTVALTLRHPDPHLLFRLGEGTAVILHPATAAQAVDRPVGTGPYRVTHWERGHSLTLAK
TDSYRHASRVRIEQATYRFVHDPLEQDAAMHADEIDLLFNFATQTVRRFQAHNRYQVLTGASTGKGMLAL
NQRRAPLNDVRVRRAITHAINREAFIRTVLGGRGVVIGSHFSPADAGYLHLASLYPYDPERARALLESAG
VRTPLRLALALPPAPYAHEGGPVIAQDLARVGIVADIQRLSWQQWLNGPFKGRFDMTLINHVEPLDYQIY
TDPDYYFGYDSPAFRALVQRHANASHPRERQQLFAQLQRHLAQDAVNAWIFAPQIGNVVRKGLRGVWMNY
PIFAHDIAALSWE
>gi|319764476|ref|YP_004128413.1| hypothetical protein Alide_3816 [Alicycliphilus denitrificans BC]
MNPHALTPSSLSSMPLSPIVAREAAHAPATGDLIEERLPFSVRVVSDAEALDKAVHIRHAAYARHVPGLA
HTLQQPEQADFADGSLVLLAESHLDGSPLGTMRIQTNRYAPLALEQSLALPPSLRNSLLAEATRLGVADG
RVGTLVKTVLFKAFYLYCLHSGVDWMVVTGRAPVDRQYLRLLFEDVYPDMGYIPMRHVGGLPHRVMKFEV
GTAERRWAEARHPLFNFMVLTYHPDIRLDAPGASGAPAWPEAPLHAPTPTLAM
>gi|319764477|ref|YP_004128414.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MQPHWRRWHGALEHALSGLLIFALPCAMLVLSVLALQTWAPRYAHDAPLRLPMHVLEDSDAQLTAETART
ALEHQPQVLLRDTHLAEAPFWFSFSVPPPGLDSPSVVEFPSRHLVRLACWGGRQLDSLGEADRVHQQGRL
FDSQAGFGLRLQDLAPGMQVLCQAQLIGPGRLTVQQWDERALRTATRAFERNAGLLEGGIVLLALFVFIT
ALINRNSTYVLFAVWLLINLRMGALSAGWDVQWLGHNVPVDWLIQGRPITLALLYVVTFVLFRSLFREEL
PKVGFQPLLNLTQWSCALMLVLSVALPYAQFLPLIWLFTAVGSLVLVFFLVRIVVITHSTVAAWYGASIG
VTLLASGYEVVAAAFGLQTWIGSVNSVTAALSSSLLATMAIAAQMRQEHRQRVQAQTELEHTYNVIPLGL
FTLDPQGHFIAANPALQAALGPAVLVPGRDHWDHYFDDTPWQRLLHSLNAQPVAEFEVRGRTDDPQLSQG
RRFLVKASRAGGRIEGSLQDVTERALATERLQFLANHDPLTQVLNRNGVQAELERALQPAGPGQDQALAL
AYLDLDRFKLINDMFGHSAGDEVLRQVCSRVDEVLQGGMHLGRVGGDEFVILMPNTHLANATLICQDIVN
SLGNRPYRVGDLSFQVHGSVGLIEVVRGSSAKDAVSTADRACREAKKKRGSHLVVFERDSCVFQEHEAEI
RLAGLLSGSDEIEGLYLEMQPIMSLKEPHHSLNFEVLLRMRDPDGQEVPTTRLITAAENSGRMGVIDRWV
LRQTLAWMREQHGKLKHTRFICMNLSGASLNDERFVQDVVRMLEQYADVAPRLCLEITESVALHDLENTR
RFIAQVHGFGAKVALDDFGAGYTSFSYLKELRGDLLKIDGGFIVNMNEHPANVAIVEAIVGLARNLGMKT
IAEWAEDSATVQTLAEIGVDYVQGFAIARSQPPERLLRMRSSADFVADADLLHYLLLQAWPAPSLFSDPK
PGQSTH
>gi|319764478|ref|YP_004128415.1| hypothetical protein Alide_3818 [Alicycliphilus denitrificans BC]
MSRTRTGAACPCGGGASLAACCGRYLDHFDSTPAPDAERLMRSRYTAFVLGRAGYLLATWHASRRPGSLD
PDEGAKWLGLEVRSHRATAEDRAEVEFVARWRVGGRAVRLHERSRFVREQGRWYYVDGDLL
>gi|319764479|ref|YP_004128416.1| hypothetical protein Alide_3819 [Alicycliphilus denitrificans BC]
MPSRRAFISRTSVAALVLAAQRQAWALSIADLSNADAASGVKAALAKGAEAAVSLLGRTDGFLGNPQVRI
GLPGQLEDTAKLMRKFGQSQRIDELVTTINRAAEAAVPMGKDLLVGAVQNMTVTDAKNILTGGDTAVTRF
FAEKTRTPLGERFLPVVRQATEKVGLTQQYNAFAGKAAGFGLLRKEDANLAQYVTGKTLDGLYFMIGEEE
RKIRQDPMGTGSALLQKVFGAAR
>gi|319764480|ref|YP_004128417.1| hypothetical protein Alide_3820 [Alicycliphilus denitrificans BC]
MFAMSVPWWEFALRGVAVYLFLLVFLRLTGKRQTGQYAPFDLVLLLILSNAVQNSMNAGDNSLVGGLISA
ATLIACHVALAHLVFRVPRLARLVDGRPQTLVQDGNLDRALMHRELLTPDDVAAALRAGGCLHLHEVERA
TLETNGTITVVLRRAGRGGTESGI
>gi|319764481|ref|YP_004128418.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MSILGNVQRVLALFAAGATDLSFTEAATLLELPKSSTSHLLNQMVRYGLLDQHSTTRRYRPGALLGQAAH
AAYVSSDFDDACREVLERLSARSGLTAYLSTLSGRETVVLQRLNGSFPVQVLSSPGSRRDATGTAMGRAL
LSRLAGPELAELFGTDGSAPLASPRQSGFARVDELLAGLASVAQARHAMVVDGAMPDIGAIAAAVRNPLD
GELRGLCISFVPRLQPGADQIEGWRRLVLEETSALGRRIGDPFWRAAPAVSTTSSITEPTP
>gi|319764482|ref|YP_004128419.1| dipeptidase e [Alicycliphilus denitrificans BC]
MNLLLLSNSTSDAGYLTHALPWIREWASHHDATGDALFVPFAGVTRTWDAYETLVAEALAPLGLRVRSVH
RLSDPVAAVQAARHVIVGGGNTFALLGHLRTTGLLEAIGARVRSGKASYLGWSAGANVACPTICTTNDMP
IADPGGFGALGLVPVQINAHYTDAHPPGHRGETREQRLREFTTLRPDMPVLGLPEGTGLRVHGSRRAVLG
AAGARRFHGPATPQWLAEGPLDHL
>gi|319764483|ref|YP_004128420.1| hypothetical protein Alide_3823 [Alicycliphilus denitrificans BC]
MIDLLSSAYVTGEDVAAHLRSLGECRVEVTRLERDGACTDFLAIEIPGLDAQAPRLGIVGRLGGIGARPA
VSGLVSDSDGAVVALAAAAKMLGMAQRGDAMPGAVHIHTHICPRAGTRPHHPVPMMRSPFPMREMMAHEV
SPRMDAILSVDTTRGNRLVNHRGVALTPVAKEGWLLPIPDLLLDVMSWVSGELPVTLPLTTQDITPYENG
LPHVNSIMQPAIATPAPVVGVALTAQATVPGCATGVTNAWDADVAMRFCIETAKLFGQRTLSFVNEEHWE
QLQARYGSLAHLQGVGRELA
>gi|319764484|ref|YP_004128421.1| arom family protein [Alicycliphilus denitrificans BC]
MSRRIAFFTIGESPRSDVVPVMSALLGEHVQIDEYGALDALDAPARERLAPRPGAHCFATRLRDGGSITL
DKEATEQRLAEVMREADDAGYDLLVPLCTGTALPALRTWMVEPQQVVDQAMVALARHAHCVGALVPLATQ
IETFHLAQPLPCALRVDHASPYERDAAAAAAAFERAGRALAGCDFIVMHCMGYTEAMRAQVARASGRPTL
LSNHLVAHTLAQLLA
>gi|319764485|ref|YP_004128422.1| hypothetical protein Alide_3825 [Alicycliphilus denitrificans BC]
MIHRRTLIALAASATLLAAAPTHAQSDWKPVRPVKLLVGFAPGGSADTLARLIAEPLSQKLGQPVVVDNV
PGAGGNIMAGRLATSAADGYTLGIGAAGSMAITFELNPKATPYKPESFTPVTMLATQPNVVIVNMSVPAN
NIGELKDYIARTPSASYGIAGIGISNHLIAEAMLARMGVKMAAVPYKGAAPVITDLLGGHIAMTMDNITT
AAQLAKEGKVKALGVTTAKRAPQLPDVPTLQEQGLAGFDMPTWQGLFLPAGTPAPVVAAYYAAMQDILKS
ASTREKMAHLGSQPVVGMKPEQFTAYLEADRKQWAATIKAARIEPQ
>gi|319764486|ref|YP_004128423.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MLLTQDQEMIRDAVRDFAQDQLWPNAARWDKEHHFPREAHRGLAALGAYGICVPEELGGAGLDYLTLALV
LEEIAAGDGGTSTAISVTNCPVNAILMRYGNAQQKRDWLTPLARGEMLGAFCLTEPHVGSDASALRTTAA
KDGDGYVINGVKQFITSGKNGQVAIVIAVTDKGAGKKGMSAFLVPTDTPGYVVARLEDKLGQHSSDTAQI
NFDGCRIPAENLIGAEGEGYKIALGALEGGRIGIAAQSVGMARSAFEFAVQYAKERESFGQPIFNHQAVG
FRLADCATQIEAARQLIWHAASLRDAGRPCLKEAAMAKLFASEMAERVCSAAIQTLGGYGVVNDFPVERI
YRDVRVCQIYEGTSDVQKILIQRALA
>gi|319764487|ref|YP_004128424.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MATILVIGASRGIGLEFVRQYRGAGCRVIATVRGDAGRERVQALGAQALTVDVANPASVSGLAWMLDGER
LDVALYVAGVIRRPGALTPPTREDFDAVMHTNVLGAMQAIPQVAPLVADARGVFAFLSSSMSQIGSVPGS
DSWLYRASKAALNMAVAAAQHDYPAATLVTIDPGWVQTDMGGTGAPLTAAQSVRGMRETLADLAPADKGR
LLHHDGRRATHW
>gi|319764488|ref|YP_004128425.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MSQHQDPVVIVSAARTPMGGFQSDFADLAAHDLGGAAIRAAVERAGIRPEQVEEVLFGNCLMAGQGQAPA
RQAGFKGGLPQSTGAVTLSKMCGAGMEATILAHDQLVAGSRDVMVAGGMESMTNAPYLLKKGRAGYRMGH
DKIFDHMMLDGLEDAYEAGRSMGTFGEDCAAKYQFTREQQDAFAIESVKRAQAATASGAFAAEITPVTVK
TRKGEVTVSIDEGPAKARLDKIASLKPAFKKDGTITAASSSSINDGAAAMVLMRESTARQLGCKPLARIV
AHATHAQAPEWFTTAPVGATEKALRKAGWKVEDVDLWEINEAFAVVPMALMADLKVPHEKVNVNGGACAL
GHPIGASGARILVTLIHALKGRGKKKGLATLCIGGGEATAMAIELV
>gi|319764489|ref|YP_004128426.1| (isocitrate dehydrogenase (nadp(+))) kinase [Alicycliphilus denitrificans BC]
MFPERLDAPQAYDIAKAMMDGFNRHYRLFRAESARAKHRFETADWHGQQRAQRERIEFYDLRVKECVRRL
DKEFNAGAQPMDLWHQVKLHYIGLMVNHLRPELAETFFNSVTTKILHRTHFHNDFIFVRPAVSTEYIESD
DPAARPTYRAYYPAPGGLSAVVSSLVEDFALQHPFEDLRRDVACVARAMEQRLGAAKLRSNFQIQVLSSL
FFRNKGAYVVGKVINGFNELPFALPLLHGERGGLVIDAALFGENDLQMLFSFARAYFMVDMEIPSAYVQF
LASLMPRKPRAELYIALGLAKQGKTLFYRDFLHHLKYSSDKFRIAPGIKGMVMLVFDLPSFPYVFKLIRD
HFPAPKETTREQVQAKYLLVKQHDRVGRMADTLEYSLVAFPRDRFSDELIEEIRRHAPSQLEISDRDGDG
RQEVIIDHLYIERRMIPLNIHLQECIDAGLDKPEAASALEHAVLEYGNAIKDLVAANIFPGDMLWKNFGI
TRNGKVVFYDYDEIEYVTDCNFRRVPPPRCEEDELSGEVWWPVGPRDVFPETFGPFLLGNEAVRAAFMRH
HADLLDVDFWQSHKERIQAGHVYDVFPYDGARRFRCASPSHQPQGDSL
>gi|319764490|ref|YP_004128427.1| carbonate dehydratase [Alicycliphilus denitrificans BC]
MTTTSIDELFAHNREWAEQMERDRPGFFTGLLAQQKPRYMWIGCSDSRVPANQITGLEPGEVFVHRNIAN
VVVPTDLNCLSTIQYAVDQLKVEHLMVVGHYGCGGVLAALQDARIGLADNWIRHVKDVRDKHAVLLEGLD
RPWRHDALCELNVVEQVMNIAHSTVMQDAWARGQKVQIHGWCYSLNNGLITNLQMSVPDVAGLAEAYRQA
VALVASRVRGQ
>gi|319764491|ref|YP_004128428.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MSIATQLPGLNFQLGEDIDALRDTVREFAQAEIAPRATEIDRTDQFPMDLWRKFGELGVLGITVPEQYGG
ADMGYLAHMVAMEEISRASASVGLSYGAHSNLCVNQINRNGNEAQKAKYLPKLISGEHVGALAMSEPGAG
SDVISMKLKAEDKGGYYLLNGSKMWITNGPDADTLVVYAKTEPELGARGVTAFLIEKSMKGFSIAQKLDK
LGMRGSHTGELVFQDVEVPAENVLGQVNGGAKVLMSGLDYERAVLTGGPLGIMQAVMDNVVPYIHDRKQF
GQSIGEFQLIQGKVADMYTVLQAGRSFAYTVAKNLDMLGIEHVRQVRKDCASVILWCAEKATWMAGEGVQ
IYGGNGYINEYPLGRLWRDAKLYEIGAGTSEIRRMLIGRELFAETC
>gi|319764492|ref|YP_004128429.1| transcription regulator merr DNA binding protein [Alicycliphilus denitrificans BC]
MATYTISDLAREFDLTTRAMRFYEDMGLLRPERAGPGGRNRIYSARDRTRLKLTLRAKRLGLSLTEAKEI
IDLYDSPRDTGVQLIKFLEVLAMHRKQLEAQMTDLQANLDEVCEHEREARELLAKIESSTAQSRG
>gi|319764493|ref|YP_004128430.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MALITLMDAQLAFGHVALLDHADFALEPAERVGLIGRNGAGKSSLLKILGGLARPDDGTLSVQQGLRITY
VAQEPDLAPEDTIFQAVSQGLSEAIALREQYLSGAPGLDLDALQSRIEAQGAWNWEQRVEETLQRLHLAP
QAVIGTLSGGTKKRVALAQALVARPDVLLLDEPTNHLDLDSIEWLEELLQAFKGGIVTITHDRAFLDRIA
TRIVELDRGQLRSYPGNFARYLVQKEEQLAQEAVVNARADKLLAQEEVWIRKGVEARRTRSQSRIGRLQA
LRADRAARREALGSVKMDIASGSQGSYQGKIVAELTRVNKAFGDRTIVRDFSATILRGDKVGLIGPNGAG
KTTLLKLILGELEPDSGSVRRGSNLQVAYFDQMRHAIDLDATLEDFISPGSEWIEIGAQRKHVKSYLGDF
LFSPARAHSPVRSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIDTLDLLEELLQGYDGTVFLVSHDR
TFLDNVVTSTIAHEGDGLWREYEGGVQDWLTQSRRSRELASAAPAAAKNSSKNEPKGTPVKREQLQKRKL
SYKEQRELEQLPGQIDALEAEQKAIRDELADGSLYARDGARAAALHQRDGEIEDLLMQALERWSELSA
>gi|319764494|ref|YP_004128431.1| protein-glutamate methylesterase [Alicycliphilus denitrificans BC]
MSGKIRVIVVDDSALVRSLLSEIINRQGDMECIGTANDPLIAREMIRERNPDVITLDVEMPRMDGIDFLG
RLMRLRPMPVVMISTLTERGAEVTMRALELGAVDFVAKPRVGLAGGLNDLAAQIVDKIRVAASAHVRRMP
VRSASAIAHPGGDAPAAPPPSAASAPLGRLSTEKLICIGASTGGTEAIREVLVHMPADSPAIVITQHMPP
GFTTSFAARLNSLCQITVKEAVNGERILPGHAYIAPGGRQFHLARSGANYVAVVDDGPPVNRHKPSVEVL
FKSAAAVVGRNAYGIMLTGMGADGAAAMREMRDAGSYNYVQDEASCIVFGMPREAIAHGAADEVLPLTQI
APALIARLRGSTDRLHHRI
>gi|319764495|ref|YP_004128432.1| ched family protein [Alicycliphilus denitrificans BC]
MSVPTRPDARPAGAPGGLPERRHVPRIAPLGVDVRAPDAAPEVSLQELKARARKPGEASFFFFDHHFQHN
AVKVLPGEFFVARERIAIMTVLGSCIAACLWDSRAGVGGMNHFMLPEGGSADTSGRYGSYAMELLINEMM
KLGARRETLQAKIFGGGQVMHNFTTMNVGERNTRFVQNYLATERIPVVSEDVLDIYPRKVVFFPATGKAM
VKRLAHAHPESLAQEVRGNAATVARTTSGGSVDLF
>gi|319764496|ref|YP_004128433.1| protein-glutamate o-methyltransferase [Alicycliphilus denitrificans BC]
MPMRGNTLAAAQAERHAHAPLGLVRPVEDRAAVQEGEGREFAWTTADFSRVKSLIYQRAGISLHDGKHAM
VYSRLSRRLRDTGHSSFHDYLGWLESSDGPEWQEFVNALTTNLTAFFREQHHFEILATLLRSRPAGPWNV
WCSAASTGEEPYSIVMTALESLGAQASFKLVASDIDSRVLATAARGVYRLDSLKGLSQERLQRFFLRGKG
ANAGLARVRPELRRAIEFLSVNLIRDDWPFREPFDAVFCRNVMIYFDAPTQRRVLERIHRVLKPGGMLFV
GHAENFGDSRDLFTLRGKTVYERL
>gi|319764497|ref|YP_004128434.1| chew domain protein [Alicycliphilus denitrificans BC]
MNVVDKGIEAVAAGAREYLTFRLGQEEYGIDILKVQEIRGYEAPTRIANAPPFIKGVINLRGTIVPIVDM
RLRFACTQAEYSSLTVVIILNLRERVVGIVVDSVSDVMELAPEQVRVAPDIDSAIDAQCIRGLGSVGERM
LILLDIERLMSGTDMGLAAA
>gi|319764498|ref|YP_004128435.1| chew domain protein [Alicycliphilus denitrificans BC]
MADTHQEGAGTGADFDLSQFYQIFFEEAGENLDQMEQMLLDLDLDAANDEELNGIFRCAHSIKGGAATFG
FADVAELTHQMESLLDRLRRHELQVIAPMVDVLLESADASRSLLARHQAGGQGEAMSTQDLVRRISTLAA
GGVPAPVAAPAPAAPTPLPAPQEAQAQQGQADADGTRALEIHIGPLAQPALAEAIKDLFRDIPGLGSIDD
LPDGRPGMRRFAVRTASTDEDLLDLFAFHVAKEQVAIHAAGAPAAPAAAPQAVPQASPEPYGFFAGAPGV
PVDEVAAAALAAPAPRPAAPRAGAEPKAASQASMESSTIRVAVNKVDQLINLVGELVITQAMLAQNSRGL
DAGLHQQLLAGLADLDRNTRDLQESVMSIRMIPMSIVFNRFPRMLRDLAGKLGKKVDFVTHGEATELDKS
LVEKITDPLTHLVRNSLDHGIELPDDRIAAGKAEHGTLSLSASHQGGSIVIEVRDDGKGLSREKILKKAR
ERGLDVSDAMPDGEVWNLIFAPGFSTADVVTDVSGRGVGMDVVKRNITSLGGSVEIDSAEGYGMRVSVRL
PLTLAIMDGMSVGVADEVYILPLSSVVESFQVNADDVNTVAQGSQLVKVRDEYMPVVSLERIFDVPRPNA
GEGSSIMVVVEADGSRVAVLVDELLGQHQVVVKNLETNYRKVPNVSGATILGDGTVALILDTAALVRRAR
H
>gi|319764499|ref|YP_004128436.1| response regulator receiver [Alicycliphilus denitrificans BC]
MQSILAVDDSPSMRKMVSFTLTGAGYHVVEAVDGQDALEKAETHDIDLVLADQNMPRLDGIGLTRKLRAH
PRFKSTPILILTTESSDQMKQAGRAAGATGWLVKPFDPTRLVEVIQKVIR
>gi|319764500|ref|YP_004128437.1| hypothetical protein Alide_3842 [Alicycliphilus denitrificans BC]
MQSTLNMPEGPAVQVPVMVAAELQDCLLMVMHDLHRLEGLLDHATENLLARFGEANASLTDAVIGGSPEL
ATLRGALRSAVTELQFHDMATQLLSHSGRVLQSCAFRLAAEVMGSEEGEESAPLEGMAPERPNPVTQSEM
AAGSVELF
>gi|319764501|ref|YP_004128438.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MIPIPTEPDTPKRPVRVLHLEDSAADHALARLTLRRAGLPHEMRHVDTLDEFARWLQQESFDLILADYRL
PGFTALDAWRIAEQRPDHPPFVLLSGAIGEAAAVDAMRLGFADYLLKDDMARLPHVLLRAIEVAEARRAR
EQAVAELADSQQRLADLAEHLQTSIEEERAAIAREIHDDIGGALAAVRFDLAWLARHSQDDGQRTHAASA
TEMLQHAIDASQRLMMNLRPPVLDQGLVAAVRWLAESFERRTRVPVRVSASREAMDMPPALQLVAYRTAQ
EALTNVHKHAQARRVHIDLSDHEGVLTLEVSDDGRGIAPEMLQKPRSFGLRGLQERARRAGGWLDISSRP
GQGTSVIMSVPLTSDGCDAGGEP
>gi|319764502|ref|YP_004128439.1| response regulator receiver [Alicycliphilus denitrificans BC]
MIQVVLCDDHAVLRRGIRDTLTESPDICVTGEAGSYPELREVLRTAACDVLLLDLNLPGRNGLEVLASLK
ESHPAIKVLIVSMYPEDQYALRCLKAGAHGYANKAGDPVQLIAAVHTVMQGRKYLTPEVAQLLADSLAQP
TPELPHESLSERELQTLVKIASGKRLSDIAEELMLSPKTVSVYRARVLEKLRLANNAELTVYAIRNRLV
>gi|319764503|ref|YP_004128440.1| flagellar biosynthetic protein flir [Alicycliphilus denitrificans BC]
MITFSEAQIMAWLSPVLWPFLRVLALFTSAPVFSMRAIPVRVRIGLAFLVALCAQAALPGQPVIDLNGRE
AAGAVLQQVGVGLAIGFAVRLVFVAVELAGEVIGLQMGLNFASFFDPASNAQVSAVARFFGNIAMLLFVV
VNGHLMVLMAVVKSFESFPVDGHFLQAVAQMRLHELGASVFASGLWIALPMIALLLFVNLTLGVISRVAP
QMNIYAVGFPVTLTVGMLGITATLPMLEQPMLTLLQQAIEIFQK
>gi|319764504|ref|YP_004128441.1| flagellar biosynthetic protein fliq [Alicycliphilus denitrificans BC]
MTAQFVLTMGRDALTLLLMIAMPVLGVVMAVGLLVSIFQAVTQIHEATLAFVPKLIAAMVVFAIAGPWMI
STLVDFLRRTIESIPSVVG
>gi|319764505|ref|YP_004128442.1| flagellar biosynthetic protein flip [Alicycliphilus denitrificans BC]
MRRCIRLTAGLACLLIAGAALGQQQGGAGTLPLVVGSGAGGTSYSVPIQTLLFFTALSFLPAVLLMMTGF
TRIVIVLSLLRQAIGTQQAPPNQVVVGLSLFLTLFVMGPTLDKVYQEAYVPYTTNALSFEQALAKAEAPM
RGFMLKQTRQSDFTLFARLAKLDEGVTAETAPLRVLVPAFVTSELKTAFQIGFMVFIPFLIIDMVVSSVL
MSLGMMMLSPVLVALPFKLMLFVLADGWNLLIGSLAASFAT
>gi|319764506|ref|YP_004128443.1| flagellar biosynthesis protein, flio [Alicycliphilus denitrificans BC]
MSAGDSVGMTQTLLLVVLFVAALAALPWLIRRLQQQRAGLQAGAGAGSRVLSAVAVGPQQRVVTVEVGPP
QQRTLLVLGVTAQAVSCLHVLPAAAGDAASFASEMSTARAQAGRGAEGGHA
>gi|319764507|ref|YP_004128444.1| flagellar motor switch protein flin [Alicycliphilus denitrificans BC]
MSTESDHDAGQPGDGAAADDPFAGWAEALEEQKSADARTIDAEQGGPLSGEPARAFAGGGDAPAQDINMV
LDIPVQLSVELGRTKVPIKYILQLAQGSVVELDALAGEPMDVLVNGYLIAQGEVVVVNDKFGIRLTDVVT
PSERLRRVSRG
>gi|319764508|ref|YP_004128445.1| flagellar motor switch protein flim [Alicycliphilus denitrificans BC]
MSESFLSQEEVDALLEGVTGESQKTVKEEIESGVVRDYDISSQERIVRGRMPTMEIVNERFARNFRIGLF
NMIRRSPEISVGTVAVQRYNAFLRELVVPTNFNIVAIRPLRGSGLIVCEPSLLFGIIDTLYGGVGKLQTR
IEGRDFSATELRVIQRLVNLICEEYKKAWQGIYPLELSYQRSEMQPQFANIATPSEIVVSTAFQLEIGDL
SGAIHICMPYATLEPIRDVLYSSVQGDAIEVDRRWVKVLTREIQAAEVTLVAELARADATVEQLLAMKPG
DFIELDREPRIRASIEGVPVFECQYGTHNAKYAIRIEQCLRGADAHWMGEKNVN
>gi|319764509|ref|YP_004128446.1| flagellar basal body-associated protein flil [Alicycliphilus denitrificans BC]
MSDTTAAPAKSKKLIIIVAVLALLLVAGGAAAWLLLAKRHAGDEEEAPARTAQAASPKTPPTFLPMENMV
VNLADPGGDRFAQVGITLELADAKTAELVKTYMPSIRSSVLLLVSQRTTDELLTREGKEKLALDVRREVS
RPLGFTVPKPRKRPASRDPEDEYEDDEDAPPRSRVDNNPVRQVLFSSFIIQ
>gi|319764510|ref|YP_004128447.1| flagellar hook-length control protein-like, c-terminal domain protein [Alicycliphilus denitrificans BC]
MEKARISSPAPQATHEARGARAAAGKAGAAQAHDQTDAQTAGFALLLAALDGGEGAGVLTTALDGSGDGA
EGLQGDPADAAAQPLAGQPDAAALAAWVAGLQPGVALAKAVEGVADGMKGRTVGGVAGSVVGNAMGGVMG
GEADTLMGRVGLGLLRHGQDSLVGQTALLDGAAETAALNCVPQGPAGRAGAARALPAQDAAGAGGGHRAL
RAGAAPVQPAMEQMAAQAVPAAQAASAAPAERRDASQALAPALARPEFDPVVPAMSAGAMAGAMAGAAPA
APREGESRIAGAGETQGAQPHAPEAAADAAQAPADAAQSGMGSAEDQLAEQVAYWVHHKTQNAALTLDGD
GRPVEVRVALTGDEAHVTFRSDQAEARQLLDAGSAELRGMLQREGLHLAGVTVGTAGGDGAPARQGAREG
GRQDARQATVQAAAPADGAAARGRGAGTRSVDIFV
>gi|319764511|ref|YP_004128448.1| flagellar export protein flij [Alicycliphilus denitrificans BC]
MSSLKAFQVAAELAERQRDAARQTLKDVQAALQAAQAQLEQLAGYAGETQGRWGMREGAEVQPEVMYHHY
QFMGRLDHAISLQTGAVSAQDARVEQARQALLAAELRLASLRKVLERRRAELALLQQRREQKQTDERAAL
RAARAQGAMPDQEH
>gi|319764512|ref|YP_004128449.1| flagellar protein export atpase flii [Alicycliphilus denitrificans BC]
MPIEPAGAWGDLMDQARARMAQELPLETRGTLTRLTGLVLEAAGLRVPVGAQCQVRMAGQEPVLAEVVGF
AGDKAFLMPAGDIHGLSSGASVTPAAAYVPVPRLGGAGHDPEAAGAGVLRLPMGDGLLGRVVDSQGQPLD
HGGPLERVTALPMDRSPINAMERDPVREPLDTGVRAINALLTVGRGQRLGLFAGSGVGKSVLLGMMARYT
QADVIVVGLIGERGREVKEFVEDILGETDRGRAVVVAAPADAPPLLRMQGAAYATAIAEHFRDQGRHVLL
LMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPALVERSGNGLNGVGSITAFYTVLSEGDDQQDPI
ADAARAILDGHIVLSRALAESGHYPAIDIEQSASRVMHNVVSRSHFDMARGFRAIYSRYQKSRDLIQVGA
YMSGSDPLLDEAIRLQPGMTAFLQQDMFEAASMDDCLAAMGQVLEGA
>gi|319764513|ref|YP_004128450.1| flagellar assembly protein flih/type iii secretion system hrpe [Alicycliphilus denitrificans BC]
MTRANRHYARFIPREEVGDVRQWDFGDVHGADALRPLVEQADVPEPEPLPAMDHAEHQALVQQAHDEGHA
RGLAEGREQARLEWQQRMDEYVAGQGREAAGRLARLAQAMEDSLAGMQQAMAREVLQLACDIARQVVRQE
IGVNPQAMLPVVREALAMLVGEGRAATVRLNPADWAALQQPLREEFGAGGIQWLADAAVEPGDCLVESAG
MVVDGTLDKRWRRAIAALGLTGGWREETDAD
>gi|319764514|ref|YP_004128451.1| flagellar motor switch protein flig [Alicycliphilus denitrificans BC]
MDEQGLNDAAIMLMSLGEEEAAEVFKHLSPKEVQRLGETIARMRTVSKEKVDEVLNRFTNDAAAQSLLVS
DTGNYVRAVLKRALGDDKAALLIDRILQGGDVSGIESLKWMDPLSVAELLRNEHPQIVAAILVHLDPEQS
SEILAQLTERQRGEIMLRIATLEGIQPTALKDLNEVLYKVLAGGDKVRKSSLGGIKTAAEIINLLGSGMD
ASVLDAIRNHDIDLAQKIMDKMFVFDDLAKLDGRAIQTVLREVASETLVVALKGAQPEVREKILANMSSR
AADAMREDLESRGPMRLSEVEAQQKEILKTVRRLADEGQIALSGGGDDAFV
>gi|319764515|ref|YP_004128452.1| flagellar m-ring protein flif [Alicycliphilus denitrificans BC]
MSAVAEVPVTPPPAASAGWQQRLTSLDRGARLRLGAAAALLLAVLVAVFFYGRQPEYRVLFSGLNDKDGG
AIVAQLAQMNVPYKYTEGGGAIMVPAERVHDVRLRLATQGLPKGSVTGFELMETNRFGVTQFQERLNFQR
GLEGELTRSIQALASVQSARVHLALPNQNGFFREQQKPSASVLLTLYPGRILDRTQIAGIVHLVASSVPE
LAPSAVSVLDDTGKLLSQSPDGGAGSGVDAQQLAYVQQIEQQYTRRILDLLEPVVGKNNVKAQVTAEVDF
SQTESTSEQHRPNLSPDASAVRSQQIVESGAAPAAQPPTGVPGAVSNQPPQGSTAPINGANPPPTAANAQ
QAGQQAGGKRESITNYEVDKTTRVTRAGAGAIKRVNAAVVVNYQSVSEAPGKPAVNKALSPEQIEQMTAL
VRETIGFNKERGDSVNLMNAPFLVEDTPSVDLPLWKQPEVVELARNLGWPVGISLAVALLLLGLVRPLLK
ARPRGVPAMGPQEGGGQLSAIAAEELERPALPAPVQPQDLQPTAEQLRLEDARKLARDNPVAVANILKTW
VNGE
>gi|319764516|ref|YP_004128453.1| flagellar hook-basal body complex subunit flie [Alicycliphilus denitrificans BC]
MDLRIASNQFPLTGTQVARRAAAPQEGTQEVGFSSAFKNALQSVSAAQDRASDLQREVQLENPKVSIEET
MVAMQKAQIGFQATLHVRNRMVQAYTDIMNMQV
>gi|319764517|ref|YP_004128454.1| flagellar protein flit [Alicycliphilus denitrificans BC]
MPEMLIDYYKAIENSSAKMLEAARLKDWDEVVRCEGACAVLIEQLRYQSQQQELEPAQRKEKARIMQRIL
RNDAQIRVLAEPWLTQFEHLFEGQLQVMH
>gi|319764518|ref|YP_004128455.1| flagellar protein flis [Alicycliphilus denitrificans BC]
MFTAMNPRAASAYQRINVETSMHTIDQHQLVSLLYEGVLNAIATARGALARGDVPTKCNSIAKAVRILEE
GLMTALDRKGGGALAENLGAVYDYSLGRLIQANVRNDDALLQEVARLIAPIAQGWSEMKKSNAAANDMAQ
PALMEA
>gi|319764519|ref|YP_004128456.1| flagellar hook-associated 2 domain-containing protein [Alicycliphilus denitrificans BC]
MASFSSIGIGLGGSVDVNALIKASVDAVKLPITKTGGLQQQAAVTNAKVSAFGQFKSLVSALADAAGKLN
SVTGWNGVKASSSNTDAVSVSAVGGAAATSFSVQVQNLATAQSSISAALQPTKQPVGEGTLTVEIGSWAG
DPKAFTAGSATAVSIDVSATDTLADVASKINGAKAGVTATVLNDGTGERLLLRSNATGEAAGYRLSVADA
DGGNDDGAGLSRLVAGATTEYARNANATVNGIAVSSPTNAFADTVAGVTFTAAKVTTEPVTVTVEKDSSA
VKKNIEAFVAAYNAVNSALNESTKYDKETQTSALLQGDSTVMTLQNTLRMALQSVNGSGVLRNLSAVGVV
SAGGLGSGNLSPDGSLELDATKFNKAMEDPDAVKAFFRGPDDGDGTEGFAGKFKAVTDKLLASDGFFATK
TKTYDSALKLNAKEVERINDRADRLEKSLTQQYTALDTKMASLNALSTYIAQQVTTWNKSS
>gi|319764520|ref|YP_004128457.1| flagellin domain protein [Alicycliphilus denitrificans BC]
MASTINTNVASLTAQRNLGVSQNSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLNQAVRNAND
GISMAQTAEGALKASGDILQRVRELAVQSANATNSASDRKAIQAEVGQLLSELDRISVTTEFNGQKLLDG
SFGSATFQVGANANQTITATTGNFRTTTYGTNLAQSANQAAAATAPASGAATVIVNGLQAKTVNVDAADT
AAKIAAAVNAVADTTGVTASARNVTELKLTAFSGSFQLEVKGDDTTTASTITFNATDAKDLAGAVKAFND
VSSKTGITAKVNASGDGLLLINDSGANIDIANKSATAAFTMAALDAPTTASQTDGSLKFGAALTVAASTG
TGVTRGTVEFSSDKGFSMGGTSAYVSAGASKLNSVNTIDVSTVEGSTKALKIIDSALAAVNGQRASFGAL
QSRFETAVNNLQTSSENMSASRSRIQDADFASETANLSRTQILQQAGTAMVAQANQLPQGVLSLLR
>gi|319764521|ref|YP_004128458.1| flagellin domain protein [Alicycliphilus denitrificans BC]
MASTINTNVASLTAQRNLGVSQNSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLNQAARNAND
GISLAQVAEGALAGSGNILQRVRELAVQSANATNSASDRKAIQAEVGQLLSELDRISVTTEFNGQKLLDG
SFGSATFQVGANANQTITATTANFRTTIYGAQLSASASVQATATAPASGAATVIVNGLQSKTVNVDAADT
AAKIAAAVNAVADTTGVTASARNVTELKLTTFGSFALAVKGDDTTTASTITFNATDAKDLAGAVKAFNDV
SSKTGITAKVNASGDGLLLINDSGANIDITNNSATGQGALTMASLDAVATAAATDGSLKFVATPLAVAAN
GGTGVSRGTVEFASDKGFSLGGSSTFIGAGGPSTLNSVNTIDVSTVEGSTKALKIIDSALAAVNGQRANF
GALQSRFETTIANLNVSSENMSASRSRIQDADFAAETANLSRTQILQQAGTAMVAQANQIPQGVLSLLK
>gi|319764522|ref|YP_004128459.1| glycosyl transferase family 2 [Alicycliphilus denitrificans BC]
MRCLLYLEPFIERQSPSWKTGWLDFAAIFKNSLSGVGADFRVLLGEALQEAAQDRGISGDATFIANYQPL
IEKAGRDYLDITSRWYFGELGAVRDVFSEYLKRLLGAWKPDVILSFSPVPFLQRLFPEARVLHVEVGIFS
RKPFPLTLYFDPCGMFKDSLLCRQSDRILAFRASQEELAFVDKLRHIYIEQGVSRLLPRAREIYGARLSG
FRKKVLLPLQFSGYYAFDANCRFGSQFDYLQEVLEKVPQDIAVVVTEHPDNPSVTDDVARYLARKYPHFV
WSAQGRDIYASSQVLMLMCDAVITVSSAVGIQALLYERPVISIGNSYVTPFADGHCLSNVVDVLNDGYKS
ERSHVLYWLLSRYYVGIDSVCNSAWFERFCRESSSGADDAILYSLDDLCQMYLATGSPDLNGVLRGCTKD
AVIDASADPARTDAKCGVRAIAFHLPQFHAIPENDAWWGKGFTEWDNVRQGQPLFDGHYQPRVPAEMGYY
DLSDVRVLERQARLAREHGVEGFCFYYYWFDGQRLLEKPVDQLLRHPEIDLPFCLCWANENWTRRWDGGE
QQVLMRQSYSPELDERFALDLLPYLRDARYIRIDGRPLLVVYRLDIIPEVARAAAVWREVWRREGIGEVY
LIAVESFRSVPPDAAGFDAACEFLPHQVNFAALGPDMPLHHLRDSSMNLADYAQLAEFWLDRPSPAYKRF
RGIVPAWDNAARRRKGGATVIHGSTPQLYEKWLRGTVARTLEEREGDERIVFINAWNEWGEGCYLEPDEK
FGHAYLEATQRVLRDPPQALLEDLRRERAAVAAPADTFAQWLQRRDPEGARARMAGEEGQGAASIHVVIE
GDDDEAIEATRRSLLGPDGRNPRGLAVSVLPAGNGCGPLQALMARHAQPWWLRVPAGVEFLPAGLEMVLQ
SLQRAPAYRAVYADEMVRDPAGALLPILRPDFNLDLLLSFPGAMARHWLFHRDALAAVGGFVPEDGGAFE
LGALLRMAEDGDFSSLCHVPEPFLVAPLAVSASEDARRVALDHLRRRGYADADVANGAQGTFRVLYGHGR
APLVSVIIPTKDQLPLLQQCVETLLEKTAYRNFEVLIVDNGSSSPEALVWLDGIERMGLDQLRVLRYPLP
FNYSAMNNLAARQARGEYLLLLNNDTAVLQGDWLDGMLNHAQRPEVGIVGAKLLYPDGRIQHAGVVLGLN
GPADHPHIGDPLNTPGHMHRLLVDQDLSAVTGACLMVRKSLYEEVGGLDEEAFKVSYNDVDLCLKVRQAG
YLVVWTPHVLVMHVGSVSQKSVDKATDEAKHARFAAEQDAMYAKWLPVLAHDPAYHRHFALDGQGYQVEP
HLRLPAGAPARGPKVLAHPADGFGCGHYRVIQPWRALHAEGRIEGAYAGHLLRPPELERYAPDVIVLQRQ
LTEVQLASMRRMHAFSQAFKVYELDDYLPSLPVQSAHRQEMQRDVFKALRQGLKYVDRFVVSTEPLAEAF
AGMHPDIRVVENRLPLPWWGSLNPSRRRSAKPRVGWAGGVGHAGDLALVADVVRALAQEVEWVFFGMCPQ
ELLEHVHECHLGVPIDRYPGRLASLGLDLAIAPLEDNMFNACKSQLKLLEYGACGYPVVCSDVGPYRRSA
LPVTKVRNRFKDWVNAIRGHIHDLDASARAGAALQEAVRRDWMLQGAALDAWQAAWTGR
>gi|319764523|ref|YP_004128460.1| dimethylmenaquinone methyltransferase [Alicycliphilus denitrificans BC]
MKIVAFVPAKGYSERIKNKNLSILDGEYLFKRKLRQLLECTKIDEVYLDTDSSELISLVDDLPVKILKRP
VELASNQTDGHELFAYECSQVTADVYIQVLCTAPFVGAATIDRALSCFLESGAESLVAIRREKQYMWKDG
VPDYGWERIPNSVDLPSIDIEAMSLYMVKRGGVPVTRRFTASPYFFELSPEESVDVNWPADLLLAESISA
GRRAQENLAMQALKPYLSSAMLSDITREMGMQCSLPEYLQPNIRRKIFGRAKTMLLDKCRPGERWENIYD
ALDSYDFVRPGDIVVVDNMVPGCAYFGGLNAGLAARAGADGAIINGLTRDAEAVGALDFPVFARGFYCSD
IKYRGVVRSMNKPLHMAGVDVVNGDYVFGDVDGVVVIPQRHWSAVQAAVMSGIDKEWRVGRAVAMGMPAK
DILRSIGEF
>gi|319764524|ref|YP_004128461.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
MFVILGYLVTFGCVFGVFIAHGGNIKVVLEALPFEMITIGGAAAGAFVVNNQPKVLKATMAMLPQVLKGN
KYTKARYMELLAMLYEILQKARKEGLMAIEADVESPQDSEIFKKFPTVGTDHHVLEFTTDYLRMMVSGNL
NAHEIEALMDSEIDTHHQEAHAPVAALTRLAGALPAFGIVAAVLGVVNTMGSVGQPPAVLGGMIASALVG
TFLGILLAYGLVEPLAGLLEQKAEDAGKEFACIKSTLLASMQGYNPSTAIEFGRKVLFSGDRPSFSELES
HVKGKK
>gi|319764525|ref|YP_004128462.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
MAEKKLQPIIIKRIKKGGHAAHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQGIAAYFASPLKVAM
QGGDGAGNSSSVIPGGGNDLSKVHGQVRRSDSESNTSTRSIDTVRAERARLDAQRIKALQSKIDAMITEN
PRLNEYRSQIRIDVTPDGLQIQIVDDQNRPMFDSGSALVKPYMRDILREIGAALGSVENRISLAGHTDAA
PYGNGDRGYSNWELSADRANASRRELVAAGMPDARLGRVVGLAASDLLEPDNPRAPVNRRITITVLTHEA
EERLMGKKNVAFPLPPADAEKQDNPTPPPKNK
>gi|319764526|ref|YP_004128463.1| response regulator receiver [Alicycliphilus denitrificans BC]
MSSALRFLIVDDFSTMRRIVRNLLKESGYTEADEAEDGVVALNKLRNGKFDFVVSDINMPNMNGFQLLTE
IKKDDTLKHLPVLMVTAEARKEDIVAAAQGGAAGYIVKPFTKATLEEKVALILKKMGL
>gi|319764527|ref|YP_004128464.1| chemotaxis phosphatase chez [Alicycliphilus denitrificans BC]
MQAEDQDAVAPSAAGPIHNQIGLLTRQLHNALNELGYADQLRGSMGELPDAQSRLSYIARLTGEAAEKVL
SRVEQAKAQHDYIASETRRVVASLVADPVAAVAKGEIFNFLTDVERVTKEADTHLTEIMMAQDFHDLTGQ
VIARVVNLAATIEQQLVQLLIQTAPPQAAPQPPAEPRREHLQGPVVNPESTPDVVTSQSQVDDLLASLGF
>gi|319764528|ref|YP_004128465.1| type iii secretion exporter [Alicycliphilus denitrificans BC]
MSSSQDKNLPATERKLQKARSDGQAARSRDLSHLAILGTGALALLVLAPWFVEYLQRALRQQLVFNAATV
QMPGEMLSRLRTMAGVGLLASAAFALLTSGAALLSAIGAGGWIFSLKPITPQFNRLNPLSGFANLFSKQQ
MANVAKMVLMTGILAAVAWNFMGRSIEQMAALVLQPSPLSLRHAGQWIVSGMSLLLLVVFLFAVIDVPLQ
AFFFKSRLKMSHEEVKQEHKESDGNPQLKGRQRQRAREIADRASIAAVPKADFVVMNPTHYAVALKYDEA
SMGAPQVVSKGTDLLAFRIRELAQQHGVPVLQSPMLARALYAHAELEQPIPAQLYTAVAQVLAYVYRLKA
ALRGAGPMPEAQPVPDAHIPPELDPHHKPATAPGNA
>gi|319764529|ref|YP_004128466.1| flagellar biosynthesis protein flha [Alicycliphilus denitrificans BC]
MSTPSPLHSMRQWAGVHGSALQGLSAPLLVVAILALMVLPIPAWLLDTFFTLNIAVALMVMMVAAYMVRP
LDFAAFPSVLLLTTLMRLSLNVASTRVVLLEGHTGPGAAGAVIEAFGHFLIGGNFAVGLIVFAILVVINF
VVVTKGAERIAEVSARFTLDAMPGKQMAVDADLNAGLIDEKEAKRRRAEVQEEANFFGSMDGASKFVRGD
AIAGILILIINIVGGFAIGMLSHGLSAGDAANSYILLAVGDALVAQIPGLLISVAAAMVISRVGKEEDMG
RQIVQQLFMSPRVLGMAGAILVLLGLIPGMPHAVFLLMGSSLGWAAWLLLQRQKQAAVEPEAPPAPVGDG
EASWDDLQPVDLLGLELGYRLIALVDKNRQGDLLTRIKGVRRKFAQEVGFLPPAVHVRDNLELKPSSYRV
LLRGVVVGEGEAHPGMFLAINPGGISTPLIGTPTTDPAFGLPAHWIDAAQKEAAQMAGFTVVDSETVMAT
HLSHLMQVHAAKLLSRTETQQLVEHVARLAPKLIEEVVPKMVSITTFQKVLQLLLEESVHIRDIRTIIET
LAEHAGGTQDPAELARRVRIALSPAIVQQIYGPTRELSVIAIEPGLERLLVQALSNANGPALDPGVADLL
TRKAAEVALKQEEMGMPACLLVPDAIRSAIARLVRRVAPRLQVLAHSEIPETHTIRIGPILQGASS
>gi|319764530|ref|YP_004128467.1| flagellar biosynthetic protein flhf [Alicycliphilus denitrificans BC]
MNIKRFTAPTAREALAKARMAFGEGTLILSNRPTADGVEVMATAEESLSSSLHGGAEPAPSRLQERADDM
AASQPMRAQKELPRPAPGAAQPGTEARGTVAKDTEQLAMSTLSFQDYVRERMLRRRHEALHGTGAAAPLG
ERAALERHAAPELPAQPPASPPVARHNPLRTMHAALGAEQLTPRRGEAPAPAANAAPTLAAGLGQQNLMK
ELQSMKDLIEDRFNTLAWLGQARQNPIQSNLMLKLIRAGYSPALSRAVLEHLPEQLGAQDAVRWLMDVLE
RNLHTDAQALPLYEEGGIYAMVGATGVGKTTTTAKLAALCARIHGPASVGLITLDTYRVGAHEQLRSYGR
MLGVVAHLAHDRAALQDLLGLLAGKKMVLIDTTGVAPRDPRKRELLDVLQLPGVHRLLVLNASSHGDTLD
DVLTGFKTDGSQQAILSKVDEAVKLGPALDALIRHQMVLRGVTNGQRVPEDWEAADAHKLVRASMRTNVK
SAFDPKVSELNFFFSPAAEAVHEQGLADVA
>gi|319764531|ref|YP_004128468.1| hypothetical protein Alide_3873 [Alicycliphilus denitrificans BC]
MLLDTAMHQAMGLHNLTPQSDLRLLAVLSQPDGGPWLEMLWQLCAHLQRLGYPVVVLDGTAREEPHAPGL
AQLLGPAPWPGAGALDTAAAGASLAVLPAARGLAWLAEQAQAEEEGTAALRRLHPLFRAYALVVLHAPPE
RLAPLLHGSASMPLIMTGPGTQGMVRCYRQLKHMALHAGVRCTVAAIVPPGVAPQPQQTAQTLATLQRSA
HKHLGLPIHTTTVTAARAQDIQRLALQLLENAGTLDAALPLLHAQGCTALSPLDRSH
>gi|319764532|ref|YP_004128469.1| RNA polymerase sigma factor, flia/whig family [Alicycliphilus denitrificans BC]
MYTAKGQLDRDALFHQHLPLVRRIAHHMIAKLPPNVELDDLVQVGMIGLTDALSRYEAAQGVQFETFASQ
RIRGAMLDELRDGDWMSRGARKSQKEIEQALHRVEQRLGRSPMESEIAAELGMDLADYQALLGKVRGTQL
VYLEDMGGGEEGEEGFLDRHVADEGADPMAVLRDQRLRTSLVAAIKQLPEREQHIMGMYYEHDMNLKEIA
AVLGVTESRVCQLHSQAIARLRTKMRGH
>gi|319764533|ref|YP_004128470.1| hypothetical protein Alide_3875 [Alicycliphilus denitrificans BC]
MPLDDTLSSIEAQLQDMQAALLSSDPQTLERTAAQLRQAATTLVQALGPGVPQGAAERVQAIARRLSLVR
DQLARVLALTERQAASLLPPAQGVTYGPSIASPGARIYRAPG
>gi|319764534|ref|YP_004128471.1| anti-sigma-28 factor flgm family protein [Alicycliphilus denitrificans BC]
MKIGNNPDIASTLSQAAAARQQAKAAAPAPAAEAASQSASRAAVGVPVTLSATARGVEAGRSTADFDAGK
VKAVKTAIDNGSFKVDAEAVADKLLANAYETLSRSRG
>gi|319764535|ref|YP_004128472.1| flagella basal body p-ring formation protein flga [Alicycliphilus denitrificans BC]
MPHSPSRPSRAARARRLLWAALALAAALAPAARAQSEAGQELSAIGQRWLDKTLAQTQGGALPLRMEVSV
GALDPRLRLAPCARVEPYLPAGARLWGRTRLGLRCMDGPTRWNVFLPISVKAFGPAWVLAGNVASGEVLS
EADAVEAEVDWAAEPAAIVANPQAWVGLIATRPLAAGQALRQNMVRAPDLFKAGSPVRVVVQGPGYAVTS
SGQAMSAGAQGQNVRVRMANGRIVAGIVLEDGTVEAAL
>gi|319764536|ref|YP_004128473.1| flagellar basal-body rod protein flgb [Alicycliphilus denitrificans BC]
MLDKLTQRLDFHGNALLLRSERQRAIASNIANADTPGYVARDFQFADALRAAEGARAPGGMRQQSVSDPR
HIPLPAASTGQSGGALGYALQTQPSLDNNSVDMDRERAAFVDNAVRYEATLRFINGNAKTMLSAIQGQ
>gi|319764537|ref|YP_004128474.1| flagellar basal-body rod protein flgc [Alicycliphilus denitrificans BC]
MSMFSIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGPDSSAGVRVSTIQES
GVPGRRVHDPSNPMADAEGYVTHSNVNAVEEMVNMISASRSYQNNVEVMNTAKSLLLKTLQMGQ
>gi|319764538|ref|YP_004128475.1| flagellar hook capping protein [Alicycliphilus denitrificans BC]
MFISPIDTSALNAGATTTSTTRDSSTDPSAMQDRFLKLLVAQLNNQDPMNPLDNAQMTTQMAQINTVTGL
QTLNLTMQTMAEQFSTMQQIQGISLIGRSVLSEGDRMSFADGTGKGMFDLAGAATNVKVDIVTAGGVVVD
SIDMGAQEGGRHSVEWDASKYQGSTSDLRFRVTATNGETAVKATALTQSQVLATGSKSGALTLTLDNGST
VNYANVLGVL
>gi|319764539|ref|YP_004128476.1| flagellar hook-basal body protein [Alicycliphilus denitrificans BC]
MGFQQGLSGLNASSKNLDVIGHNIANSNTVGFKASRTEFASMVATAIGTASTGNAGIGVQVGAVAQQFTQ
GNITVTGNNLDVAINGNGFFKIQQPDGSFAYTRAGNFKLDDKGNVITNNGGKVMGYPMDPITQTRTASTP
QPLVFPTGAPIPAKQTTSIKATFNLDARAPDAAGNPSATPPIAATPRSTYGTSLNVYDSQGVATPVSLYF
QKTGTANTWDVYDRLDDPNATPPVVATPIGQITFDNNGQITGPAATPPATGFQLPITIAPPTPNPNNLPA
YTVQVNLDGVTQFGAKFAVSDLTQDGYTAGQLTGINIGDDGTIMTSYSNGVTRAEGQIALASFRNAQGLA
DIGNNLWVETFESGQPVMGVATEGAFGALRSGALEDSNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMS
TLVNLR
>gi|319764540|ref|YP_004128477.1| flagellar basal-body rod protein flgf [Alicycliphilus denitrificans BC]
MDRIIYTSMTGASAAAHRQAVLANNLANVSTNGFRAEMSSFRSVPLQGSGSTTRVFALEATSGHVETPGP
VQRTGRNLDAMAAGNAWFAVQGLDGTEAYTRAGSFEVTEAGQLVTPTGLPVLSDGGAPITAPQGAELTLG
ADGTVTARVPGQQPQTVGRLKLATPAQDDPLKRGDDGLFRTASGEPMASDPAARLLAGALEGSNVNPVES
MVGMIAAARQFEQQMRLLQTAENDDKTASQLLSLNG
>gi|319764541|ref|YP_004128478.1| flagellar basal-body rod protein flgg [Alicycliphilus denitrificans BC]
MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGFKRNSAVFEDLIYQNLRQVGAQTTEENQLPTGLHLGL
GVRTVATSRHFTQGSLQQSSNSLDVAINGNGFFEVQLPDGTIGYTRDGSFQLDAQGRMVTSGGLPVANGI
TVPQGATSISISETGVVSATIAGNAQPQQLGQLAMSSFINAAGLQPVGQNMYKESAASGPPQQGQPGTNG
LGVIKQGFLETSNVNVVEELVTMIQTQRAYEMNSKAIQTSDQMLAKLSQL
>gi|319764542|ref|YP_004128479.1| flagellar l-ring protein [Alicycliphilus denitrificans BC]
MTASLRLVAPAALALLATGCATLNPPPPVDLLPTAPPPVAATPRPTGPATGSLFHAASYRPAFEDRRARM
VGDIVTIQIVEQVTAKQNSTSSIDRSANTSAGISAFPFIGAGKLGKLDLGAKSANQFSGKGGTESSNTFT
GTITATVIEVLPNGHLVVAGEKQIGVNENVDVLRFSGTVDPRSLQPGSVVASTQVANARLQSRGRGAQSE
AQAMGWLSRAFNSVAPF
>gi|319764543|ref|YP_004128480.1| flagellar p-ring protein [Alicycliphilus denitrificans BC]
MITVPLLPSSAGARALRRLAAFGVLALAAALPAYALRIKEVAAVQGVRSNQLTGYGLVVGLDGTGDQTTQ
MPITTQAMQNYLQQAGISLPAGTTAPQLKNVATVIVTAELPPFAQPGQAIDVSVASMGNAKSLKGGTLIA
TPLRGADGEIYALAQGNMVVGGAGASAGGSKVQINHLSAGRIPGGAQVERSVPTPLHDGETITLGLNASD
FQTARKVASTINTRIGSGLATALDGRTVQVRAPMDPGSRVNFIAELEELPLPDSTPAAKVVINARTGSIV
LNQAVTLGPCAIAHGNLSITISSTPVISQPAPLSQGQTVVAQKSDIQLKQDGGKVIQVPASPQLADVVRA
LNTLGATPQDLLAILQAIKASGALNAELEVI
>gi|319764544|ref|YP_004128481.1| flagellar rod assembly protein/muramidase flgj [Alicycliphilus denitrificans BC]
MAFSSLSGAGTAAARQALAVDGRSLNALKLQAGQGDAQATRDATREAARQLESLFMRELIKSMREATAKS
GLLDGAEGNLANDLFDQQLSVQMSGRPGGLADAIQRQLSRQLGGDGQTTIDAGSTLSLDATLRKAAPADN
PRASAPKGRENFVQHHRAAAERVAQDSGIPASFMLGQAGHETGWGRSEIRNKDGSNAFNLFGIKAGKGWT
GKVAEVTTTEYVNGQPRKVTARFRAYGSYEESFRDYARLINDNPRYEKARAKTHSAAAYAAELQKAGYAT
DPQYATKLARAIQSTQSVARNPVVAQAPGTQA
>gi|319764545|ref|YP_004128482.1| flagellar hook-associated protein flgk [Alicycliphilus denitrificans BC]
MSLLNVGARALLANQVALQTTGHNIANVSTAGYSRQSVAMQTVQGQFTGSGYIGNGVNVATILRNHNELL
TRQAAAAQAVQAGDSVRAERLSQLQDVFQGGTSGLGAAITDMLNSLADVVASPNDITARTVTLTRMNEMA
ARMRSSAEQLQEIQYSVTEQLKNDATRINQLASGIAEANEQIARVRGNGQSPNDLLDKRDQLIRELNQYI
QTTQIPADDGSVGVFVGGSQALVLGSTATSVSVDESQLFPGSGQMRLLFNRPGATPVELEEGMLGGGEVA
GLLRFVNNDLAEGRNLLGRMALAIGTTMNYQQTQGLTLDGQPGKPLFSTPSSVQGYTQGTAQGSIDLTDS
SKFSPTKFAASDYEVRFTTPPAGQVVRLSDGKTTAFTDLNDLRGQQIDGLTFDFATAGAAGERVLFKPFA
SAAANIQSLVYSPRDLAAANPVNAAMGTSNTGTLQLAELKAEGPTLTLPPDGDTANTPPAFPGGIQLQFH
AGPPATFDVVNQGAAPPTTVATGQSYTPGQPIQIDGWSITLQGTPQDGDTVTVGNALDPQYGDGYTRNAG
NASALMRLRDVKMFDESTLSDGYAGLMAQVGTRTQSAQYAAKLSDSIASNLEASRTAVSGVNLDEEAARL
IQYQQAYQASAKMLQIAQNIFDNLIQSMGR
>gi|319764546|ref|YP_004128483.1| flagellar hook-associated protein 3 [Alicycliphilus denitrificans BC]
MTNFYRVSTANMYDATLRNLNARQKSLVDLQENLTSGKRVVRASDDPVAAAQAERALTRISRIQTEQRAL
EVQRNAIAQAESTLGDAIGLVQEIRQLVVAAGGGALKPEDRKTYADQIQSLREQLTDVINRKDTNGIPLL
GALGSALQPFAGPLSGSPDYLFAGLPGQASSSSTAIATTLDGHSALMFDPRRDGVYQAGVSTIPADRSLT
TSAITAVDRNQITGDGYRIDFTAVGPGATPGTTTATYTITNTTTGVTSAPVTVPDFASDKPATIAVTGVP
GMTFSISGTPAAGDAVTLQPSPSLMSTIDSAIEGIRGAANNNAATQAVGQALANIDAGMERLNNMRGYAG
ELLNRADRITGDQSQRSIQLEADRSRAEDLDMVQGISGFQNAQVGYQAALQSYAMVQKLSLFNFMS
>gi|319764547|ref|YP_004128484.1| metal-dependent hydrolase hdod [Alicycliphilus denitrificans BC]
MVQSVLGSLVLGYRPLWNAARKLAGVQLYVHGQGAAMVDAPHLLRTIQELWSAGSPPLLLSPRSQPLLMD
LLAHAPRGAPWIEVPGDWMALPAVRERAGQAHARGLRLVWSGALDHLPDTETARLFDNSLLHLSSGDAVR
ALQAGAAAQRSPLITGQMYDNVASRALLAHCLDQGGALAVAGWPMEDVLHALRHQPQQPAHEVVQRLLKA
IDEDQSIDRFEQILGEDPLLAYRFMTYTNSAALGLRTGVDSLRRGLVMMGYGSLGRWLAEQLPHASTEPD
LRPIRTAMVLRARLTEQLLESGAGKDLRREVYLSGLFSQLDELLREPLGTILRRLPLSERVYNAAVLRTG
PYAPSLELACALEGDDAGAIRQLCETHELEIEYVNRSLLRVLSEVAVDRPAAAH
>gi|319764548|ref|YP_004128485.1| 2-nitropropane dioxygenase npd [Alicycliphilus denitrificans BC]
MHDTLPPTDLCRLLGCRLPLLLAGMGGVARSELVAAVTGAGAFGFLGMVREPLALIEREVAQVRARTDLP
FGVNLIPAATPAPLLREQVGLCITLRVPVVCLFWDVDRAVVERLRGAGITVVHQVGSVQDALDAQEAGAQ
ALIAQGVEAGGHVRGRQPLAGLLAGVLATARVPVAAAGGLADGRDVARVLAAGAQAAVLGTALVATHESF
AHDYHKRRLVAARASDTLLTEDFHVNWPPHAAVRVLRNSVTRGERGDPFGPAPATGPAVIGEEEGRPIHL
FSTDSPLRSMTGDFEAMALYAGRGVDRIAGVEPAADCVRRIAAEAAAQLAR
>gi|319764549|ref|YP_004128486.1| regulatory protein gntr hth [Alicycliphilus denitrificans BC]
MLTLTEQLAERFAQRIRTRLLPAGARLPSVRECARQQGVSPYTVVAAYDKLLAQGLVEARRQRGFYVRDI
AQKTPPAQEGQASAAIPLGAKTASPLGTIGVRMSGSQINATALMRGMFYQASAKPQPGAGVLPVGWLEEA
RFLPAAVRKITASPALQGGSLSYGEPMGDAGLRAALARRMAGISIAAQPDQIMTTVGATHALDIVSRTLL
KAGDPVMVEEPGWSVEFARLDALGMRVLPVPRGPEGPDLAVMACYCELHAPKLFVSVSVLHNPTGYSLPP
ASAHQVLQLAERHGFYVVEDDTYGHIAPEYAVRLAALDGLRRTIYVNGFAKILAPNWRVGYLAAPPGLVE
RMLDTKLLSTLTTPSILEKALALCIDQGQLRRHAERIRQRLAQARARSVQLALEAGCSFAAEPAGMFGWV
ETGVDTDMLAQRMLDEGYLIAPGALFHATRQPCTLMRINFANTQEPAFWRTWKNVVKTG
>gi|319764550|ref|YP_004128487.1| hypothetical protein Alide_3892 [Alicycliphilus denitrificans BC]
MPLVEFTALLVLATAMSFTPGPNTTLSTALAANRGLPAAMRFVVAVPVGWSALLLLCAAGLGAIVVAVPA
LRWAIKAVGIGYLLWLALKLAQSGRLSEADAARLSVGFWQGVALQFVNIKAWLLALTIVAGWIVGHEDGH
ARMAVVLPVMLAFAFTSNLAYAAMGALLRRWLAQGRRLLWFNRAMACVLVATALWMVAA
>gi|319764551|ref|YP_004128488.1| hypothetical protein Alide_3893 [Alicycliphilus denitrificans BC]
MTAPAATRGAHPVRQAETLGLWLGVLGVAIFAITLPATRLATGTAEQPQLSPWFVTLGRAALAGLLSAAF
LLATRSPRPLPHQFRHLGWAVLGNVLGYPLLLAYALRSVTASHAAVVTALLPLVTAGVAALVLHQRARLG
FWVCAVLGSALVVAFSLLRGWQQGHGFSLEAADALLVGAVVAASVGYIHGARITPALGAERVICWVCLLA
LPATLPATLWLWPTQPVAPSAWGGFLYVGVFSMWAGFFAWYRGLALGGALRVSQTQLLQPFFSILAAIPL
LGEPLDMVTLGFAAAVVATVAVGRRMPAGN
>gi|319764552|ref|YP_004128489.1| aminotransferase class i and ii [Alicycliphilus denitrificans BC]
MTNWTLAARAAKMNPSVIREILKVTEKPGIISLAGGLPSPKTFPIESFAAAAASVLANEGASALQYAASE
GHAPLREAIAGFLPWDVHPDQVLITTGSQQALDLAAKVLIDAGSRVLVETPTYLGALQAFAPMEPQVVSV
ASDDEGVLIDDLAAKAGSGADKARFLYVLPNFQNPTGRTMSEARREALSARAAELGLPLIEDNPYGDLWF
DKAPPKPLAARNPEGCLYMGSFSKVLAPGLRLGYLVAPRQMYPKLLQAKQAADLHTPSFNQRLVAEVLKN
GFLDRHVPTIRQLYKRQCQAMVAALEKEMQGLGVTWNRPDGGMFLWLRLPEGMSALELLPRAVERNVAFV
PGAAFYAQQADERTLRLSFVTASEEQIQTAVAALAAAIRETAA
>gi|319764553|ref|YP_004128490.1| phenazine biosynthesis protein phzf family [Alicycliphilus denitrificans BC]
MRQRPFQQVDVFTATPYLGNPLAVVLDGEGLTTEDMQRFTHWTNLSEATFVLPPTPEGRAAGADYRLRIF
CPGRELPFAGHPTLGSCHAWLQAGGRPRAAGRIVQECGVGLVTLRRDDERLAFAAPPLIRSGPLAEDDVR
LIARGLGIAREDIIAHAWCDNGPNWRGVMLRSAEQVLRLKPDAAVLAGLDVGVVGPRGKVGVVGASDAEG
IAFEVRAFFPGNNGLAEDPVTGSLNAALAQWLMGAGLAPARYVASQGTALGRAGRVHVEQEGEHIWIGGH
SVTCVHGEVQL
>gi|319764554|ref|YP_004128491.1| pyridoxal-5'-phosphate-dependent protein beta subunit [Alicycliphilus denitrificans BC]
MTHDTTLPSLADIEAAAQRVYREFQPTPQYRWGLLADRLGTECWVKHENHNPVGAFKIRGGLTYFDQLAS
QGRLPREVISATRGNHGQSMGWAARRHGVACTIVVPRGNSVEKNAAMRALGVNLVEHGEDFQAAREHALQ
LAEERGAHMVPSYHPHLVRGVATYWWEFLRAVPHMDVAYVPIGLGSGACAAVAARQALGHRVRIVGVVSR
HATTYADSFAAGHVVAAPVSTQLADGMAVRVADPDALAVLLPALDHLVQVGDDEVAAAMRALFTDTHNVA
EGAGAAALAAAMQERERLRGQCVGLALTGGNVDAEVFARVLAGR
>gi|319764555|ref|YP_004128492.1| hypothetical protein Alide_3897 [Alicycliphilus denitrificans BC]
MRWRQRPEGSNWGDFGPDDQLGRANLIGPEQVRKGALEVREGVSLCLSLPLDYPGGNGLNPRRHPPVLRP
TRRGDVPYVNFPLGHVYTGATDVISDDQALLSLQYSTQWDSLAHVGALFDPEGDGRLRTVYYNGYRGHEH
ILGPQDHGLPARGDDGAPARYQPVCCEGRASDESVARALGVEHLAVKGMQGRGVLVDLARAYGMDFRDIG
YDELMRAMERSGATVEPGDMLLLRTGFAGLVLSMQRQPDAHRLHHSCAALDGGGEKLLQWITDSGIAALI
ADNYAVERHPPRRVPEDGAPYPVLPLHEHCLFKLGLPLGELWYLEELADRLHASGRTRFLLTAPPLRLPG
AVGSPVTPIATL
>gi|319764556|ref|YP_004128493.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MHPSSTPIRRACRALCAGLALLATAAGAQDTRISDDVVRLGILTDLNGPFADITGPGSAAAIQMAIDDFG
GQVLGRKIELIVSDHQNKADIASSKAREWFDTGKVDAIMDVAVSAPALAVLEIAKQKQKVIIFNGPGLDR
LTGDLCMPSTVHYVYDTYALANVTASAITERGGKDWFFVAADYAFGHSLQEQAGAVVAAHGGKVLGAAKH
PIGATDFASFLLSAQNSRAQVVGLANAGGDTVNTIKAAREFGLTQGKNKQTLAGLLMYINDVHAIGLRTA
AGLMLTEAFYWDMNDATRAWSKRYFEKMKKMPNMSQAGAYSSTMHYLKAVQAAKTDDTAKVMAQMRATPI
NDFFAKNGRIREDGRMVHDMYLFEVKTQAESKYPWDYYKLVATVPGDKAFLPLPQSKCPLVKK
>gi|319764557|ref|YP_004128494.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MSTALIVGATGVVGQACLRHFASLPGWNAIGVARRAITPPPGAQALQLDLQDGAACAAALGARDDITHVV
YAAVYEQPGGLVGGWRDQEQMRINLTMLRNVVEPLSRPGDALRHVTIMQGGKAYGVHIHPQIAVPARERW
PRDAHENFYWLQEDFLRERQAQSGAWHFTIMRPRIVFGDALGSHMNPIPAIGVYAWLRHEQGLPLAYPGG
PARVNQAIDADLIAQACAWAAESPNARNETFNLDNGDVFVWQNVWPAIADALGMPAGAPEPQSLAALLPT
QQQAWERIVDKYQLAAPRDLTAFIGQGAAYADFQMNHGREGPLAPVIMSSVKIRQAGFHACIDTEDMFRK
WFGRLQERRLLPPSAQARANEDMEE
>gi|319764558|ref|YP_004128495.1| phosphoglycerate mutase [Alicycliphilus denitrificans BC]
MRQAQGRGLTTIVPMGTLYLVRHGQASFGADDYDRLSPLGQAQAERLGSYWRERGLRFDAVLCGTLHRHA
QTLQGIRQGLPGTPEPLLTPGLNEYDSQALIQAMHPAPLPRPDTPELRRQHFRLLCDALAQWMAGTISPA
GMPGWNDFADGVHAALAHVRSRHTGHNVLLVSSGGPIATAVGQVLSTPPEVTIALNMRIRNSAVTEFGIS
PKRLMLQTFNTLPHLDGPAHAGWVTHA
>gi|319764559|ref|YP_004128496.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MQPPLPASSTQYAQQLRQGFRWLRFGGALEAEYRAYCGRNEHRRVLWFSAICLVVWGGYSLFDLWRIDVA
LLDVRQQALLMSLRAVRVAVTAVIVLTLACALWRCPMRVLQAVLIVLGVTLSCGAAFAVYVYKVLGAPHE
TAVLVMVMLGVFSPFAVSLWVQLLVALLYLACVGALAWAAPLPEVRAQMLRLEVVLALSALVFGFAAYWR
EHQRREQFLYRGDAHWLAMRDALTGLYNRRMFNHHIGQLVAQAQREGQPLALLLMDVDYFKSYNDSHGHQ
QGDVVLQQVAQVVLACIGRPLDLVARVGGEEFAVLLYGSSAEHAQALGQSLVAGVRQRALPHAASPVAQV
VTVSVGGAMLSPQDQPRTLYARADRMLYEAKNGGRDRCCWAQTLQA
>gi|319764560|ref|YP_004128497.1| nuclear export factor gle1 [Alicycliphilus denitrificans BC]
MQFPLRCLAAAATLCAAAAASGHVVLSPDGATAGSAHDAVFSVGHACKGARVTTALSVRLPEGFRLIEAL
PRPGWTLTAPQAGEVRWTAGSPAAALGGGEKGEFVVRGVLPATPGTLYFPVRQVCDVGQADWVQVSGPGD
AARPDMPAARLEVLPPGGGDRPQAHRH
>gi|319764561|ref|YP_004128498.1| tonb-dependent receptor [Alicycliphilus denitrificans BC]
MNKSMWPLVLGGAAFPWLAGAVFAQAGPAGEAPERAKSLGVVTVSGGQPSSLPTQIPTTIEGVTREEIDA
RINATDSEDALKYLPSLLVRKRYIGDYNHAILSTRASGTGNSARSAVYADGILLSNYLGNGIANGTNYAP
RWGLVTPEEIERVDVMYGPFSAAYPGNSAGAVVDYVTRMPTKLEAHASAGYSSQPNDLYSTLRSFDSWQT
SASLGSRSGDWSWWVNVHRTNSQGQPQTFTTVPVASGTPGAAGTTVSGAVPGLNTTNTPWYILGTGTQYH
TVQDHAKLKLAYDITPTLRASYTLGWWDNRSEGRPASFLTGPDGQPVYSGAVNIQGRGYTLAPTAFPLTN
DAQTHTMHGASLKSHIGGLFDWELAVSLYDYGRDRQRAPTVALPQAAAGGPGTLQRQDGTGWNTLAAKGT
WRPQGAQGAHIVDFGAGRDAYKLGIDKLNVAGSWMDGAANPASPVSSVGGRAETAYLWAQDAWRFAPRWT
AVLGLRWEDWTAHDGFTATASSRQAYDRRSESHFSPKAALAWQWSSDTVLKASVGRAVRFPTVGELYGAT
SGGALSFINDPGLKPEKSWTGELSAEKDLGSGLARATLFHETTRDALYSQPIPGTTVSRVQNVDKIRTLG
LELAYSGQPAWMRGLDLGASLTYADSRIVANAANPASVDKWQPRVPRWRSTAYATWQPDDRWALTVAARY
SGRQYSSLDNSDVNAFAYFGASRYFTVDLRARYRLTRQLSAALGIDNANNYQYWNFHPYPQRTYTASLRW
DL
>gi|319764562|ref|YP_004128499.1| hypothetical protein Alide_3904 [Alicycliphilus denitrificans BC]
MMAPGLLGRAVLAWFALSLGVAIASPLVNPQALELVCSSAGVMKVIAKTDGGAQEMGSTHLDCPMCMPFV
APPPAAPATAVPPPSPLAYALRPVVAARIAAATAAPLPARGPPSL
>gi|319764563|ref|YP_004128500.1| creatininase [Alicycliphilus denitrificans BC]
MPSSPPPPERFASHWWSELGARDFAQARASGLAQRAVAVLPVAAVEQHGPHLPLSVDATLLQGVIAAALP
LLPDGLPALFLPPQNVGLSTEHLSYPGTLTLSPATLIALWTELGECVARAGVRKLLLLNGHGGNVAPMDI
VARELRQRCGLLVYSSSWFSLPLPDEVNGLFGAEEHRFGIHGGAIETSMMLHLAPATVRMEHARHWPSSS
QERAARYPILGNGRSAKLGWAIEDYHPAGAVGDAAGAMADKGRAVVQAAAQALAQLIAEIHALPLDTVGG
APRPL
>gi|319764564|ref|YP_004128501.1| extra-cytoplasmic solute receptor [Alicycliphilus denitrificans BC]
MVETSRRRFMTTAAAASAAAALGLPLQARAEAYPDKPVRVIVPFPAGGTTDVVARLTLQKLGELMGQSFI
VDNKGGANGVIGTDLAARAAPDGYTLLLNTAGAQTLSPVIYKTQYEALASFEPIAHLCDVGFVVIARKDL
PANNMQELIGLAKQGKSLSASSGSSMISLITEQFKKVVGAPGIINAQYKGTSPQMQAVVAGEVDFSFDSF
ASVEMIRAGKVKALAVLLPQRAESFPQVPTMAEAGVEGMNFSSWSGLLAPKGTPKEIVSLLAQQMDKVMQ
MPDVLAKLKTYNYVPRRGTPQEFGRLIASDNERWKRIVKETNFKIE
>gi|319764565|ref|YP_004128502.1| protein-disulfide reductase [Alicycliphilus denitrificans BC]
MKQGGAQSASVRTEHVQAELVAQAPDGVGPGRPLWLGLSITHAPGWHTYWKNAGDSGLPTRLEWKLPPGM
DAGEIAWPVPRRIRIGTLANYGYEGQVLLPVPVAVSGAFAPGPLAKEVTVRLQASWLVCRQECIPEEGEF
ALQIPIQGTTALHATQFEAAAQAQPRPLAPGAGSGAQVEDGALALRLTGLPAALRGQALEVFAETADMIE
TAADPSQQWRGDTWVARLPLSPQRSAGPDPVPLVLAHGGQGWRVELPVQGGWPQAAAMAQVSPALEAALR
ANAAGAGTAALAPTPAPMGLWLAALGGALLGGLILNLMPCVFPVLAIKVVGFARHAQDRRAHRIGGLAYT
AGVVLSFLLLGAAMLALRAAGDAVGWGFQLQSPAVVALLAALFTVIGLNLAGVFEFGAMLPSRLAGLQAR
HPVADAFLTGVLAVAVASPCTAPFMGASLGLTATLPGAQALSIFAALGLGLALPYLLASWLPGFARALPR
PGAWMQTLRRLMAFPMFATVVWLVWVLGQQSGIDGAAALLALLVALAMAVWTLTLRGRGRAVLAPLSIVA
CAWLAWAWGPKVVEPLPAAGAAPMADAATPWRPWQAGLPEQLLARGQPVFVDYTAAWCVTCQYNKKTTLS
DAEVLRGFAAKNVALLRADWTRRDPAITAALAQLGRSGVPVYVLHAPGRAPVVFSEILSSDALRAAIDSL
>gi|319764566|ref|YP_004128503.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen [Alicycliphilus denitrificans BC]
MGQIAPDFTLQSTEGKPVRLSELRGKYVALEWTNPGCPFVRKHYDSGNMPATQKAAREQGLAWLSINSTA
KASGDYLEPARLAAWLAERKAQPTAILMDEEGTMGHAYGARTTPHMYVIDPGGTLVYAGGIDSIPSARVA
DIERATNYVKAALADIAAQRPIAAAATQPYGCSIKYK
>gi|319764567|ref|YP_004128504.1| hypothetical protein Alide_3909 [Alicycliphilus denitrificans BC]
MNLLAHAWILLPAVLLAGALIGATGIGGVLLVPVLTRFGGVEPAQAIAAASLAFALPALVALRPLRRDPA
LARRTAPLLLGALTGAVGGALLVQALPARALLAGVTALVLFAGWRGLAARGPGAEAAPQLPRPALAGLGL
LVGVGSALTGTGGPVLLLPLLMLRRQPVQFAVAAAQAIQLPVALTSSAVHAAAHRLDWGLALACGVVMLA
GSLAGQRLVQGLGRHRLQRFVSMLLLAAGAWFGWLLLA
>gi|319764568|ref|YP_004128505.1| peptidoglycan-binding domain 1 protein [Alicycliphilus denitrificans BC]
MHPPRLSRAVRATALAFMGLGCLVSQALAGSPHEAAAPRPFSQPEPLAQELRHRMESPLVRELQVRLRHA
NYLALYDVDDRYGLKTRETVRKFQKDHGLRETGVVDQATWDRLLPRSHKPTAAELGNTDVGPWFTGPGQA
GYIRELQHRLRQAGHYQGAIDGEFHGATQQAISGFRARVGLPASHVMDERTWARLIAKTRNPRYAQLFDA
PPASTLAQALDPRCATGRVVCISREQKRMSLVVDGRTLFTREARFARPGWESDKGEFRIWYMNSDTVSTI
FGERTPMPYAIFYDGNVAIHYSDDFDQVGYEGGSHGCSQLRDYQVAKWLYEQVRVGDRVVVY
>gi|319764569|ref|YP_004128506.1| uroporphyrinogen decarboxylase [Alicycliphilus denitrificans BC]
MSNTFAPLRNDTFLRACLRQATDYTPLWLMRQAGRYLPEYKATRARAGSFMGLATNVDYATEVTLQPLER
FPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFAKAVRSEADVAQLAVPDMDRLRYVFDAVTSIRRALDG
RVPLIGFSGSPWTLACYMVEGKGSDDYRMVKSLMYARPDLMHRILAVNADAVARYLNAQIDAGAQAVMIF
DSWGGVLADGMFQQFSLAYTARVLAQLQRTGADGQPVPRIVFTKGGGIWLQDMKALDCEVLGLDWTANLG
QARAIVGGSAGGPGKALQGNIDPNVLFAPPEAIAAQARAVLDSFGTPHTDKDTTGPTHIFNLGHGISQHT
PPEHVAALVEAVHGHSRSLRRR
>gi|319764570|ref|YP_004128507.1| primosomal protein n' [Alicycliphilus denitrificans BC]
MSDALPCLVQVAVSTPAHSAVGDLLSYACAAPLAPGTLVRVPLGAREVLGVVWDAPAEPLPLPAGMAPRP
VAGVLEGIAPLDAAWRRLVAFTARYYQRALGEVALAALPPQLRELTPEQLARRMRRPAVGAAAQARESAT
ESVALSAEQAIAAAEIESNPGPFLLFGSTGSGKTEVYMHCVARALAASPAAQALVMVPEINLTPQLEARF
RARFAPLYGEVAVVSLHSGMTNPQRLKSWLAAHQGVARIVLGTRMAVFASLPGLALVVADEEHDASYKQQ
EGARYSARDLAVWRAREQGAKVILGSATPSLESWHASSPEVGRYQRLAMPARIGAGELPRLRLVDMGQQP
RGAVFSPPLLAAITERVERGEQCLVLLNRRGFAPVLHCHDCGWKSDCPHCSAHQVFHKIDRTLRCHHCGY
AQRVPRACPACGNPDIAPVGRGTEQLEEQLAALLRNVITPGRRAARVARMDADTTRAKGALEEQLAQVHA
GEVDVLVGTQMVAKGHDFRRITLVAAVQPDGALFSSDFRAPERLFALLMQAAGRAGRDAQYVAAQASPPE
MWLQTWHPDHAVYAALRRHDYPAFAQQQLAERREAGMPPFAYQALVRADARTQEAAQAFLQAAADAARAA
QLPGLEQVFIFPPVPLTVQRVANVERAQMLLESPGRGALQRFLAAWQPLLHAERARHRALVRWLVDVDPQ
AI
>gi|319764571|ref|YP_004128508.1| acetyl-CoA acetyltransferase [Alicycliphilus denitrificans BC]
MTQRDVFIVSTARTAIGTFGGSLKDVPNTQLATTAVKAAIARAGIAPDAVGHVVMGNVIPTDTKDAYLSR
VAAIDAGCPIETPAFNVNRLCGSGLQAIVSAAQAIGYGDCDVAVGGGSESMSRGPYFDQAARWGARMGDA
KSIDYMLGILHDPWQKMHMGITAENVAERYRISREMQDQLALESQRRAAAAIAAGHFKEQIVPVEIATRK
GTVLFDTDEHVRADTTLDVLAGMKPAFRKEGGTVTAGNASGINDGAAAVVLAAGDRVAALGLKPLARLVG
YAHAGVEPAYMGIGPVPATQKVLARTGLKVSDMDVIEANEAFAAQACAVAQELGFDPAKVNPNGSGISLG
HPVGATGAIITTKAIAELHRTGGRYALVTMCIGGGQGIAAIFERV
>gi|319764572|ref|YP_004128509.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MTTTPLIHTRQGAIATLRFDRPEAMNALDVPTAIALLGAVRAIAQDSGVRAVLLQGSGRAFVAGGDLATL
RADPVQGAKDLLEPLNEALVLLEALDAPVIAQVHGAAAGAGLSLMLMCDFVLAAEGTKFNLAYINLGTSC
DVGASWALPRLVGLRHALEIALLGETFTAADALRLGLVNRVLPAAELDAAAQAFAARIAAGPTVAYGRMR
RLMRGSAGRSLPEQLAAEAQAFGACARTADMREGIEAFFAKRPPQFRGQ
>gi|319764573|ref|YP_004128510.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MTPRATDNVLEVNNIEVIYNKVVQALRGLSLAVPRGQIVALLGSNGAGKSTTLKAVSGLLPLENGALASG
SISFNGQATAGIAPQLLVRRGLSHVMEGRRIFEDLTIEENLVASTYALAGRDGAAKPDFDLVYEYFPRLH
ERRKGLAGYLSGGEQQMLAIGRALIAQPELILLDEPSLGLSPKLTEDIFGIIARINAERGTSMLLVEQNA
TVALAVAHSGYIMENGKIVIDGTAERLANDPDVREFYLGMGGGGEAKSFKDVKHYKRRKRWLS
>gi|319764574|ref|YP_004128511.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MQRISQKRRRLMLGAAATGAAALAHPLSVLAQGAEEIVIGGSIPMTGVFAFAGVGINAGIQDYVKIVNDA
GGIKGRKVRYVPEDTGYKVDVSVAAFKKITSQNKVNVYYGDSTGFAKTINPELERNGNILMAGASFASEL
NDPKKYPNQFLVGPDYTEMFGILLKHIAKEKPGAKVAFVYSDSEFGRDPIEKSEAEAKKLGLSVPIKIMT
PAGSVDVSTEVIKLRRAAPDYTIFHGYILAPIPEFITQGKQQGMKSKWMGTFWTMDSSTVMKMGEAGDGF
MGVMPYRYYYDTEKAPMLEKIRAMRPEYQSTAYMQGFLAAMLFLESAKRCLDANKPLTGANLKAALNSIK
DFDTGGLIGVPLTITGNSIPVGRVYKADMKAQKMVAASDWIKL
>gi|319764575|ref|YP_004128512.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MRIGTLKESYVADAALFDSRTQHAWLIIAAALLLLFPFAASDYWLYMACLVAINVASSTGLNILTGYTGL
VSLGQAAFMGLGAYTVAILQTRLGTPFLLNLLAGGVVAMLGGIVVGIPSLRVKGLYLAIATIAASFIAHF
LFANFQITGGTAGISMPPARLLGMDLDTSFRLYWLIVPVTLLMLLGAANLFRTRIGRAFIAIRDRDISAE
VLGIPLLRYKLLSFGLSSFYAGIAGGLWAYFFRVVTPESFPLSMSIFFLAAIIVGGMGSILGGIFGAVFM
TMVPELLKLIVDLLPGGAALAVFLSPVRLIVFGALIIGFLVFEPLGLAEIWRRVRRFFHLWPFRN
>gi|319764576|ref|YP_004128513.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MMDWAYLFEISLTGIASGGLYALAALAFVMVYKATRVVNIAIGEMLMAGGYLFFTFAAMWALPLWLAIPA
AVLACGLLGAVIERTMIRPLLGEPPISVFMVTVGLSSVLIGLVEMVWTADQRRLPEFMPGDPIMIGDAFL
APKVFWGAVIAAVFIAAVLLVFRYWRGGVALRATASDQAAAYSVGINVPRVFSLAWVASAMLAAVSGIIV
GSIGGISSSMGVFGLSVLVVVIVGGLDSVLGALVGGILIGLVEALAGAYLGGEYKLLATFVVLVVILMAR
PYGLFGTHEIERL
>gi|319764577|ref|YP_004128514.1| abc transporter related protein [Alicycliphilus denitrificans BC]
METTLARGAHTTAPPLLQVDSVTLAFGGVRALSGVGFAVQPGSITAVIGPNGAGKTSLFNTISGFYRPSK
GSIRFKGQDITRIPAPQRARMGLGRSFQNIALFRGMTVLDNIKLGRHAHLQTNVFDALLYWGRARREEAE
LRRDIEERIIDFLEIDHIRHAPVSALSYGLQKRVEMARALAMQPEILMLDEPVAGMNREETEDMARFILD
VRAEWGVTVLMVEHDMGMVMDLSDHVVVLNFGQVIAQGVPAVVQADPEVGRAYLGSGNVDELRAKLRAAA
GAAA
>gi|319764578|ref|YP_004128515.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MGSSSTAATPAARRARKPADDSPWAREKERAQQREAKRNAVLSTAAQMFNERGFHATSLDDIAARLHVTK
PTLYYYVKNKDEILLECVRKGLHMTLDGIEASRAAGGNAVDQLRACMQVYADIVTQPFGMCLIRVGDEEV
PEPSRTELRRMKSEIDQAFRRLVAQGVQEGSLSACDPKMTAFVIAGALSWIGRWYQPDGSYSAAQVAEQC
IATLMNGVLRQAARAAPPRARKKAS
>gi|319764579|ref|YP_004128516.1| auxin efflux carrier [Alicycliphilus denitrificans BC]
MGWLQWCGDVSAAATIAPVLSVLLVTFPFFALVLCGYLATRGGALPASAIGGLNSFVLYFALPCMLYRFG
AQTPIAQLLDPAVAGVYLLCALLMVGGTVALTRRSVGWNDAAFGALVATFPNTGFMGVPLLVALLGEHSA
GPVILSMALDMVVTTSLCIALSRLDGAGAHGVAVALRNAARGMAVNPMPWSIVLGGVASALQWQLPGPVD
KTLAMLAGAASPVALFTIGAVLARSQMNQHEYVPPGRYVPIALAKLVVHPLLVWCVGRAAIALGAPLSSF
TFTVLVLLAALPSASNVALLVERFGAHGGRVARIILVSTALAFLSFSGAVALLL
>gi|319764580|ref|YP_004128517.1| uvrd/rep helicase [Alicycliphilus denitrificans BC]
MSGLNLAQLQAVHYTEGPCLVLAGAGSGKTRVITHKIARLIETGLAPRRIAAITFTNKAAAEMRERAAGL
IGRQAKDVLVCTFHALGVRMVREDGHVLGLKPSFSILDQDDVTGILKDCAGGTTDLATARQWQWTISNWK
NQGWDARKALAMAKDDHERSIALIMQRYEERLSAYQSVDFDDLIGMPMRLLRHHPEVREKWQRLLGHVLV
DEYQDTNATQYELLKYLVGERARFTAVGDDDQSIYGWRGATLDNLKKLPQDFPQLKVIKLEQNYRSTSAI
LRAANNVIGPNPKLFPKTLFSELGEGEPVRVVDCDNEEHEAERAVARIQGLRAASNPPPAWKDFAILYRA
NHQAKPFEKALRKANIPYKVSGGTSFFDRAEIKDLCAWFRLWINNDDDPAFLRAVTSPRRGVGHTTLGAL
GEFATQHKQSMFGALFNAMLPAVIPKRGLEGLLEFGRTINDLEHRARHTHGAENARAFLADWLKEIGYEQ
HLYDGEDSEKVAAARWSNVLEFCDWMAQRAGGQVEEGTGLQSETKSLLEVAQTIALLSTISEREQEQDMV
VLSTLHASKGLEWPHVILAGVTEGMLPFKLDDDEGRQQKVADDVAARLQEERRLMYVGITRAQRTLAVSW
TKKRKKGREMVACQPSRFIAEMKLDAATARENPRDKLRQLREEFARKAQAAAATPD
>gi|319764581|ref|YP_004128518.1| hypothetical protein Alide_3925 [Alicycliphilus denitrificans BC]
MRTTLFLIAFSACLISACAQNHSKPACPTATQMEQPELVGRWQADMPGQNGPIVLELGPHPEWDGTVKGH
ILRPGSSAVVVGDVNRGELTLEESRDGRKVTGNWFGQVVEGSCAREIRGEWTDEADRPYAFTLRKIGDPQ
P
>gi|319764582|ref|YP_004128519.1| phospholipase a(1) [Alicycliphilus denitrificans BC]
MTRPLPFPLRWCAALLGAALPLASPAQPAAPAGGDAGWRQCAALADDSQARLACFDRWAGEQAWQAPAAP
ASAQPAAPGDAAPPPVDAAPPTTHTAEAVQADGCRDAQYGTLSRFWELEAGSDCGAFRFRGYRPMTVSVV
GASNVNRQPTSGNPENNAASPIDYRRTEMRVQLSVRTKLAQGLLTRGEPTLRDSLWFGYTQQSYWQLFSP
DISRPFRNTDHEPEIMYVYPTDAKLPFGWRWRYSGIGLVHQSNGQSLPLSRSWNRVYLMSGMELADRWRI
TGRIWKRLHENAANDDNPGISNYVGRAELGLAWTPDPDNTLSLTARHSLGATARGSVRLEWLQSLGTSFV
GRRTNLRLHTQLFSGYGDSLIDYNRRRTVFSVGVSLVDF
>gi|319764583|ref|YP_004128520.1| hypothetical protein Alide_3927 [Alicycliphilus denitrificans BC]
MTQLAAAMHWRAHGPRRAIALSLAAAALALAGAAVAWIAAARTAPAGGTVGDGRSGPAGMVWVPAGRFVM
GNTSSKALPNEKPGHGVRVAGFWMDRTHVTNRQFEQFVRATGYVTTAERVPDWPSLQAQLPPGTPRPPAG
AMVPGALVFAGTSQPVSLADYMRWWRYMPGASWRHPQGPQSDLRGKEDHPVVQVSYEDAQAYARWAGKRL
PTEAEWEYAARGGLDQQRFAWGHLLEPEGRPMARTWSAQPQVFPVASAKVMPGTAPVASYAPNGYGLYDM
AGNAWQWVADWYRYDAFARQARKGVVANPRGPGESFDPEGLRADAPKRVIRGGSFLCSEEYCEGYRVSAR
QGQDPYSASANVGFRLVLDAQDWRY
>gi|319764584|ref|YP_004128521.1| sulfatase [Alicycliphilus denitrificans BC]
MTIHFLFRQAAHAAALSAVLAAVAGCAGDRGALPTQAAAAGPGVPARTTAAKLPNILIILADDLGYNDIE
PFGQDVIETPALKALAAEGMRFTNFHVHATCSPTRAQLLSGVDNHVAGMGSMGEYRTPEMDKYPDSYIGS
MNGRVKTIAEVMKERGYATFMAGKWHLGGKPGQLPKARGFERSYVLVGPGGSHWDDNGLLGVNPKSRFTE
DDKPIARDTGEFSSNLYTDRFLKYMKEAQQAGKPFFGYLAYQAVHDPLHAPADAIAKYRGKFSQGYDAAR
QQLYRRMLQMGVVPAGTRMSPTAPLFQPWSQLDPAERQRQERIMEVYAAMVDNMDWNIGRVIDELKRTGA
YDDTLIFFISDNGPSGAYMDLYPGNADGKWIKATFDTSQANLGAPLSFAGVGPGWASASASPFKLFKMIG
TEGGTLSPMIVRGPGVAKPGSINDGFLGVEDIFPTVMQIAGADRGTERNGVSLAPLKGVSFAPVLQGRAA
AARGADFERGSELFGNKEYRQGRWKITWLPKPYGEARWQLFDTDADRGETLDLAAKYPQRVADMAARYDA
WARANSVMAWDYDYLAKNLFDYFDWRKGVPRQIINPGQE
>gi|319764585|ref|YP_004128522.1| catechol 2,3-dioxygenase [Alicycliphilus denitrificans BC]
MSWNLPGESRYGIHSIDHFALEVPSLAQARHFFEAFGLDVSEEGAGLALRAHAAPHVWARLHQGPKKRLA
YLSLSCYGDEYEALCDQALAAGARAAPQGTPYLSAEGRWLLDPDGNLVQLKAGPKMTPCSMVHGTVRQAG
PNERGMCNRSAVPRVRPRRLSHVLLFTPDIERALGFWSDAFGLRLSDRGGDAVAFMHGRHGSDHHLVAFA
ASSAPGWHHSAWDVDGIDEVGRGGEQMREAGYAEGWGTGHHVLGSNFFHYVRDPWGSFAEYSADIDYIPM
GAKWPAGSHPAEDSLYQWGPPVPEYFIRNVEAG
>gi|319764586|ref|YP_004128523.1| monooxygenase fad-binding protein [Alicycliphilus denitrificans BC]
MRTIEIPVLVVGAGPAGLSATCLLATQGVRTLTITRYPGTANSPRAHITNQRTMEVFRDLGIEDRMYEVA
TPQALMSNNVWATSFAGVEIARLQAWGSGPERRVDYELASPSSMCNLPQHVMEPVLLAAARERGGQFLFS
TELVAMRQEGDKVVSRLVDRISGEEIEVVSDWAIGCDGDNSVVVRELGFETEGRMNLGAAMNVWLEADLT
QYTAHRPGTLYWMTQPGNNYWVGSGTWICVRPWTEWVLLFMYDPSQGEPDTSEAALIERAQATIGDPSIP
VRIKAASKWTINQVVAKSMRKGRVFIAGNAAHRHPPANGLGTNTCVQDGFNLAWKLAMVIKGQAGDGLLD
SYSDERQPVGENVVRRAMQSVRDMLPISDALGFEPGQDEAAGWANVDQLFSNTAHGRERRRKLRDAVALQ
NYQFNCHGVELGQVYASSAVIGDGSAPPEPARDPELYYHPSTRPGASLPHAWLRQGRRQVSTLDLVGKGR
FTLLTGVGGGAWKAAAQGAAEALGIELPVVSIGGPDCDAQDVYSRWADLAGIGESGALLVRPDRHVAWRQ
QDDAQAGGDALVQALSQILDQRAPARS
>gi|319764587|ref|YP_004128524.1| fumarylacetoacetate (faa) hydrolase [Alicycliphilus denitrificans BC]
MKIASFLLDGQRRVGVLTERGLAVIDTGGADLGALLRQGLDVAGLRQRAAASQRFADPADVTFLPPAAEP
PKVICVGLNYADHTKESPYEQPDYPTLFLRAATSLGAHGAAVERPRASETLDWEGEMVVVLGKGGRHIPK
DKALDCVFGYAPGNEISVREYQFKSPQWTVGKNFDGTGTWGPYVVTSDELPPGGKGLKLETRLNGEVVQS
ANTGDMLFDVATVIATVSEAITLQAGDIIFSGTPAGVGFGRTPKRFMKHGDVVEVEIERIGLLRNPIRDE
QR
>gi|319764588|ref|YP_004128525.1| porin [Alicycliphilus denitrificans BC]
MKKNLVTLAALILAGAASAQSSVALFGVVDAGVARYSQGGLGKTMLDTSGLGPSSLGFRGTEDLGGGLSA
HFWLEAALLNDVGAGSSSGNGNPSTNGGLAFGRRGTVSIAGRFGEVRLGRDTPPSWWNHVVFDPFFTAGP
GSGANITSGGGANGFAGANPLSFSRISNTIQYQWGFAPNAQSAIGRGVYVQLMHAFAENAGGAPARGQYS
GGRIGYAGGPLNVALSYARSKGPAYAADAARGYSTFESFNLGGSYDIGAARLMAHVGANDSSAPGTRHDH
WGLAATINAGPGYIPLAYNAVRQNNATRDGASQIAAGYVYNLSRRTALYASASYIRNRNNGTYTFLGGNG
GGQPGLQTAFGAGTPFGSGTGYGMGIRTSF
>gi|319764589|ref|YP_004128526.1| gntr domain protein [Alicycliphilus denitrificans BC]
MSSAPVTIDTDPPRTMASALADSLRGDIIKGVHAPGAKLAIKELCQRYDAGAIPMREALSRLATSGLVVA
QDQRGFRVADVSRAELEDITDARIHIECEALRRSITRGSLDWEERLVGAQHRLLRLSMLTGDGNIDAAWE
SAHDAFHIALISGCGSHWLVDLARMLRDQTARYRYLSITPGGEPPESKRDVTAEHRAMAEAALARDADQA
CALLAEHLQATTRLVLSNALRA
>gi|319764590|ref|YP_004128527.1| hypothetical protein Alide_3934 [Alicycliphilus denitrificans BC]
MDLQYELKAGSYYLYDMRETPSAVTGERRFKLKTDSVAIAFDRHTGEMHQHGSPARIQSWATHQRRRLRA
AGALDEANGIVVVSGPLPVDELNKCLWISGYCRRLFTRLATLPHGKLQRQAQQWKKAA
>gi|319764591|ref|YP_004128528.1| uspa domain-containing protein [Alicycliphilus denitrificans BC]
MFRILIAIDGSELALDAVRHGLELMRRGGLQATLVLGHVQEEASFMELATQGADAVAEAAVAAGRHLMAS
AVALVEAAGVPYETEIALGPVAATLADMVENCGCDLLIIGARGLGGLRGALLGSVSQALVHQSPVPVTVV
KHAEPQELPDDGDDEDAA
>gi|319764592|ref|YP_004128529.1| queuine tRNA-ribosyltransferase [Alicycliphilus denitrificans BC]
MLQFQLLATDPSSHARRGTLTLNHGVVQTPIFMPVGTYGTVKGVMPRSLREMGAQIILGNTFHLWMRPGL
DIVKDFGGLHGFEQWDRPILTDSGGFQVWSLGAMRKITEEGVHFASPVNGDKLFMSPEVSMQIQTILNSD
IVMQLDECTPYETNGHKTTEAEARKSMEMSRRWAARSKAEFERLANPNALFGIVQGGMYEHLRQESLDAL
VEMDFPGYAIGGVSVGEPKDEMLRIMAHTPHRLPAHKPRYLMGVGTPEDLVEGVAQGVDMFDCVMPTRNA
RNGTLFTRYGDLKIRNARHKADHQPLDPSCTCHACAGTEGVAWNDGGRGGFSRAYLHHLDRCGEMLGPML
TTIHNLHYYLRLMQEIRDALDAGAFAAFRARFKADRARRV
>gi|319764593|ref|YP_004128530.1| hypothetical protein Alide_3937 [Alicycliphilus denitrificans BC]
MGKALRLSEKWFRRGLWLVALVFAGFLIGLGGTIVGDLPRVERPLALDNFLDQGAAQQLRAQVRDARQAE
QDAQAALEQARLQHAKARSGTLAEREGFSNWLAARSATQRAEHDPEVIARTRALDALKAGERKAQQAVQA
QQQALLDARQGAQAAQQRLDAIEREGGQKMAAEQRRVELRVFLYRLALTLPLLAAAGWLFARKRQSMYWP
FVWGFILFALFAFFVELVPYLPSYGGYVRYAVGIAVTALVGRYAIVALNRYLERQKQAEQLPDQERRKEL
SYDVALARQAKGVCPGCERAVDLKNEKIDFCPHCGIGLFDRCGHCSTRKSAFARFCHACGAAAAAQG
>gi|319764594|ref|YP_004128531.1| pas sensor protein [Alicycliphilus denitrificans BC]
MSTTPTPPAPWERIVADVADALIYADREGIIRAWNPAATALFGFEAAEALGQSLDLIIPAHLREAHWRGF
DRAIAHGSCGREVRTTRGTHKDGRKLYVDMSFSVVTDGNGQALGSAAMARDATERYLAELARRKAGG
>gi|319764595|ref|YP_004128532.1| 6-phosphogluconate dehydrogenase nad-binding protein [Alicycliphilus denitrificans BC]
MVGQCYAQALQAQGHTIAAFCDHAPSDALRALAAQLGAPIHAAPGPWLADAELAVSAVFGTTALDLARAS
FAHLQAGALYLDMTTADPQAMREAEALARQRGVRFVDVAITGAVNLSGARTPLLCAGADAGEAARLLAAC
GAPVQVAGDQPGDAAELKLLRSIFTKGLEALAVECLVTAERKGLRETLFRVLSDIDQGSLRETMESMVRT
HIVHAGRRRNEVVEARRQMELAGVPAIVLAGVQQRFEHTLAQQQARPYAGQTTADALAWLGAPARP
>gi|319764596|ref|YP_004128533.1| hypothetical protein Alide_3940 [Alicycliphilus denitrificans BC]
MRISRRLILGASLLAACTAALAQDYPAKPIRFIVPFPPGGGTDSLTRLVANKLTETLKWNFVVENKPGAG
GNVALDTTAKAVPDGYTLVMAQTDNVVLNPLLYSKLTYDPVKDLVPVGLVASGPAVLVVRADSPYKTLAD
VVAAAKAAPAKLTFASPGLGTVSHLISELWQKSSGMKLTHVPYRGLSQALPDVLSGQVDMYMGSIPTLQG
HIKGGKVRALAVTTAKRSPVLPLVPTYTESGIPGVELASVWGVMAPAGTPQNVIQRLNTEINKVLQQPDT
REKIIASGAVMLGGSPQEMGELYAADRQKLAPVVRDSGTRLD
>gi|319764597|ref|YP_004128534.1| hypothetical protein Alide_3941 [Alicycliphilus denitrificans BC]
MATSIFFSRRRIAALSLLALAGVGWAQPALPPGPITMIVGWPAGGPSDNVARLIATHMAEALGQSIVIDN
KGGAGGNIGTDATARARADGSTIMLATVASHGLNSALYDKLNHDPIKDFAPIGMITTSPSVMLVPMGSPY
RSVRELIEAARAQPGKLNYGSGGVGSSQHLAGANFKKLAGVDVAHIPYKGTAPAMTDLMAGRVDFVLTTG
AMSFIRSGKLRPLAVASRERLPALPDVPTFDEAGVKGFYTDSWYGLVAPAGTPRSALEKLNAALAAALNK
PAVRQQFIDQGSLPVTPMKVDEFWAFVQKQMPLAAEQVRISGAKAE
>gi|319764598|ref|YP_004128535.1| dimethylmenaquinone methyltransferase [Alicycliphilus denitrificans BC]
MIGLRILNRARAVDLALARSFLGIPVANVSDCMARMTAGGARLRPMHGSGAMAGPALTVKTRPGDNLMVH
KALELAAPGDVIVVDAGGDLTNAIIGEIMVGDAIQRGLGGIVINGAIRDAAALRVGSFPVFAAGVTHRGP
YKDGPGEINVPIAIDGMVIEPGDLIIGDDDGLLCVPYAEAESLLAAAQAKQEVEARMVAGIADGSYDRGW
VDATLRRLNCPMPE
>gi|319764599|ref|YP_004128536.1| gntr domain protein [Alicycliphilus denitrificans BC]
MAKLSDTLYAELRRRIMSGHYAPGERLREESLAQEMQVSRTPVRAALQRLVEDGLLVAASRGATVAGWTQ
WDIAEAFELRILLEPHAAGLAAERATPQQIDEMDALNDEMHACALAETDDRAARVQAVNNRFHHLLVEAA
HSGRLSGMLQNFLDMPIMIGSFYFYSQQDMLDSVSQHRQVAAAIRRRDRRFAEQAMAFHLRASFLRFEMQ
RVRPGQGEGAAVTPASGSSGA
>gi|319764600|ref|YP_004128537.1| phospholipid/glycerol acyltransferase [Alicycliphilus denitrificans BC]
MSAQQPISSSSPHASAAQHPNQFALLRQRRFAPFFWTQFAGAANDNLFKFAFTVMVTYQLGVSWLPPAMA
GLVIGALFILPFLLFSATAGQLTDKFEKTRIIRFVKNLEIAIMLVAAAGFMAGSAAVLLGCVFLMGLHST
LFGPVKFAYLPQALSERELTGGNGMVEMGTFVAILLGNVAGGLLVALPGVGHTAVAVACVGLALAGRLVA
QWIPLAPATDPGLAINWNPVSETWRNLRLAHGNLVVFRSLLGISWMWFFGAVFLSQFPSFAKQVLHGDEQ
VASLLLVVFSVGIGIGSLLCEVLSRRHVEIGLVPLGAIGMSVFAIDLYLASRGLPPSAPQGLAAFVARPA
HWHVMADLLLLSLFAGLYSVPMYALIQMRSQSTHRARIIAANNILNALFMIASAVLAGALLSAGFTVPQI
FLFTGIANAVVAFHIFMLVPEYLLRFVAWVLSRCVYRFQVRGDEHIPTEGAAILACNHVSFVDAVLLMAA
SPRPIYFIMDHRIFRVPVLGALFRLAKAIPVAPQKDDAATYEAAFERAAQVLKEGDLLAIFPEGGITRDG
QLQEFKGGIMKIIDRARADGVEAPVVPMALTNLWGSFFSRIEQGGAMVRPFRRGMFNRVGLNVGAPVAAV
QVTPGGLRERVAGLLAA
>gi|319764601|ref|YP_004128538.1| ATP-dependent metalloprotease ftsh [Alicycliphilus denitrificans BC]
MPPPQPPRPGPPPGSPQPPWQWNPNRLWLVILALTALFWLRDLWVTSNQVQPIPYSEFLQHLKAGRLQSI
SISSQFIEGQLKTALPDGRTRIVTTRVDPALAAELAGYDVRFEGVVENKLLSGLLSWVIPGLMLLAAWSF
IGRRIAAQGGMGGLLAVGKSRAKLHSETDVKVSFDDVAGVDEAKAELRESVKFLRNPKDYGRLGAHMPKG
ILLVGPPGTGKTLLARAMAGEAGVPFFSITGSEFVEMFVGVGAARVRDLFEQARASAPCIIFIDELDALG
RARGVGPLSGGHDEKEQTLNQLLAEMDGFDTSAGVVILAATNRPEILDPALLRAGRFDRQVLVDRPDRKG
RADVLRVHLRKVRLGGDVDPDAVAALTPGFAGADLANLVNEAALLATRRGADAVAMADFTAAVERIVAGL
ERHQRVLGDKERRTVAVHEMGHALVAMALPGTDPVHKISIIPRGIGALGYTLQRPSEDRYLASEGELLNR
LAVLMAGRAAEALVMGEVSTGAADDLVKATDIARDMVARYGMSPEVGQVVYERQQPRFLDLPDGMALERG
LSDDTSRRIDMAVRALVDEAFARASAVLAERRALLQEGADKLLAQETLTEADLLPLAEAARRGSAA
>gi|319764602|ref|YP_004128539.1| phosphoribosyltransferase [Alicycliphilus denitrificans BC]
MHPSAGARSCLYDRAELDAVMHAMAGRVAAWLQPQQRLAVIGILRRGAPLAQRLTELLVQRHGIAPPLRL
DLSVKRYADDLTLLYPETRLDEPAGHAAPDLGGHSLLVVDDVLYSGHSLLRVLQYLAGKQPQQIRVATLV
DRCVARLPVHADVVGVRLEVAPGSIIDCHVPPYEPDFQIDLVQPGRAP
>gi|319764603|ref|YP_004128540.1| phosphoribosyltransferase [Alicycliphilus denitrificans BC]
MKAPDRPIVFRDRIDAACQLARRLQAYRGRNPLVLAIPRGAVPMARSLAEALQGDLDVVLVRKLGAPFQS
ELAIGSVDESGWVYLAPHAAAAGADREYIAAEKRRQMDVIRQRRAQYTPVRPPLDPAGRIVIVVDDGLAT
GATMVAALHGLRQRHPARLVCAVPVSSPEALDMVRPLADEVLCLQAPADFRAVGQFYRDFAQVEDDEVVA
LLKP
>gi|319764604|ref|YP_004128541.1| dienelactone hydrolase [Alicycliphilus denitrificans BC]
MASPHEQLVRIPVDQAHVEGLLALPAAPIGVVLFAHGSGSSRHSPRNNYVARVLHARGVGTLLLDLLTPE
EDRDYRTRFDIALLTQRLRAAARWLGRQQLTRSLPMGYFGASTGAAAALMAAAAQGRDIRAVVSRGGRPD
LAGPEALARVACPTLLVVGSRDDEVLELNRQAASLMRCPHRLSVVPGATHLFEEPGTLEAAARQAADWFE
KYLQPA
>gi|319764605|ref|YP_004128542.1| zinc-binding alcohol dehydrogenase family protein [Alicycliphilus denitrificans BC]
MRAMVLEQPGRPLRLTELPQPVPRDGQLLLAVEACGVCRTDLHLLDGELPDPVLPVVPGHEIVARVAGLG
PGVQGWRLGQRVGVPWLGWTCGQCHFCTSGRENLCDRARFTGYQLDGGYAEYTLADARYCLALPEEPAAE
HLAPLLCAGLIGYRALRMAGDPQRLGVYGFGAAAHLITQLARAQGREVFAFTRPGDGASQEFARSLGANW
AAGTDEAPPQPLDATLIFAPAGPLVPIALQHLDKGGCVVCAGIHMSDIPGFPYAWLWGERSIRSVANLTR
EDGLAFFEAVRQVPLRSEVSVFALEQANEALERLRQGALQGAAVLCM
>gi|319764606|ref|YP_004128543.1| hypothetical protein Alide_3950 [Alicycliphilus denitrificans BC]
MHPLLRRAATAAAMLLTTASALAQATDWPRQPITLIMGFPAGSGVDVVARAVQEPLSQKLGQPVIIDYKS
GAAGNIASEYVAHARPDGYTLAFGTAATHGSNAALYKNLPFDVEADFVPVGPLIDVSNVLTINPNVIDAK
NLKEFVEIVKANPGKYNYASTGNGTGTHMAFAEFNARLGLNMVHVPYKGGPEAITSVLRGETCCIMNQVQ
TVLPHYKAGRVRLLGVTTAKPVAAVQEVPTIASSGLPGTQGFDSSIWFGIFAPKGTDAAVVHKLSTALRQ
VLEQPELRQRFESQGNAVRIETPEQFRQTVRKDRAKWAQVVKDAKISIN
>gi|319764607|ref|YP_004128544.1| monooxygenase fad-binding protein [Alicycliphilus denitrificans BC]
MSVSPPMGMAGLAALEERLAHDLLTLNWRARPWLPTRSHGGQAVIDVLVIGAGQAGLAASMALAQQGVAA
VLLDRAPADYEGPWATTARMETLRSPKELTGPALGVPSLTFRAWFEAQWGREAWDELDKIPRLQWMDYLR
WYRRVTGADVRNGHAATAVRPRADGLVEVDVQAPAGHATWLARRVVLATGRDGLGGPQIPPFMQDVERGL
WAHSSDVLDYATLAGKRVGVIGMGSSAMDSASTALECGAASVDLIARRAAMPMVNKSKGSGVPGLTQGHY
DLPDAWKWRIRHYINAQQVPPPHGSTLRVSRHANAFFHFGCAVHAVTQAGRELRVATARGTFAFNFLILA
TGFAIDWAQKPEFAPFARHVRTWGERYRPPPGEEDRELFDSPDLGPVFEFQEKAPGTCPGLDRIHCFCYP
AALSHGTVSGDIPAISDGARRLASGIAGLLYREDVEHHHAVLQAYAEPELLGDEWTPADTSQRVLPSP
>gi|319764608|ref|YP_004128545.1| uncharacterized peroxidase-related enzyme [Alicycliphilus denitrificans BC]
MTDTIDQLTHLDNAPHALAARQQRAKAIAATQACEDLLLAPALPGGLPLPERLAVAQAVAAASGVAALAA
HYGAQLARLPAPVQDARWQVITRFAHLLATEPAAADRAALLALPGAGLPTSDVVLLAQLIGFVAYQARLV
AGVAALAALGPATEGAAPAQGEPDAPFVHPANLPPPGEPLRLNGYTSETLDWKAWLPVVDPASASAEQNA
VLDASHPKARTSDFYLVLAHQPRVLAERSQAFNAIMYAPGGLPRAERELATTVVSRINGCVYCASVHAQR
FEQLAKRNDVIAQVFTDPDSAGTSARERAIVQASAALTRAPGGFGPQHLTPLRAAGLGDLELLDTVHAIA
LFAWANRLMLNLGEAVHP
>gi|319764609|ref|YP_004128546.1| hypothetical protein Alide_3953 [Alicycliphilus denitrificans BC]
MKLFPNAHATHPQWRMAAALVLAQLKAQMALPGYARAPTLGLLYITDHYADDAAALLRHLAEALPSVTDW
SGTVGVGVAGNNVEYFDEPALSLMLCDVPSAQYQVFSGVAPLQRGAAHKALVHADGQTPDLAELLAEMAE
RTASGCLFGGVAASRGRSVQFAQHAGSDGTRGGVLSGGLSGVAFGPQVDLVSRVTQGCQPIGPQAVITEA
RDNVVLRLDGRSALDVLLGALGVTLAGDPQPALRAVRATLAGLSDADGPPLRHRGHIGADARVRHIVGLD
GARGGVALADRVEAGMRLVFCQRHAAAARADLVRICAEIREELAPELQAPQAVPAGSAAPRGEQMPARRL
CGALYVSCSGRGGPHFGGPSAELQIVRRALGDVPLTGFFAFGEIASHRLYGYTGVLTVFAGPGSEN
>gi|319764610|ref|YP_004128547.1| hypothetical protein Alide_3954 [Alicycliphilus denitrificans BC]
MSDTTPFGFGRFVPGFDFLQNLAKGAAAGMPALSGWVAPTMSVEEIDRRIQELKTVQFWLEQNARALTAT
VQALEVQKMTLATLQGMNVAMGDMVGAFGAAHAAGDGGSATRQAAAAPAPAPAPEPAPQPEAPAQEEPRR
AEAPAQPESAPAGPAAPGMVDPVQWWGALTNQFQQLAANALKDAGAHRAAFESTRDMASGAFKAATDMAA
QMAAQGMHGAAAAARPKAAAEPGAQAKPAARPRPAARKTAAAAKKPAAPR
>gi|319764611|ref|YP_004128548.1| histone family protein DNA-binding protein [Alicycliphilus denitrificans BC]
MATAKKTAAPAKKTTAAKKAAAPAKTAVVKKAAAPAAALKPVKDAFTKTTLVAHLATQAGVEPKAAKAVL
AALETAILGSVHKKGSGEFTLPGLLKIGLQQVPAKKKRFGKDPFTGEERWFPAKPASVKIKTRALKKLKD
ATL
>gi|319764612|ref|YP_004128549.1| protein tyrosine/serine phosphatase [Alicycliphilus denitrificans BC]
MDDFSRSLSLAGASNFRDLGGYAGRDGRIVRWRRIFRSDHLAGLTPQDAHVLAELGLARAVDFRGRVESS
ALSYALPDVRYYALPIEPTVVQRAKEMAQTGQRMTEPKAVELMQDTYRAFVSDNAAQFAGLFEQLLAEDT
PLVFHCTAGKDRTGFAAALILLALGVDRDVVMQDYLLTNGLYRRPESLKSSAPEEVLNVIWRVREDFLQA
ALQAVDRDHGGVQRYLERRLGVDEAARRRLADLYLQPYRV
>gi|319764613|ref|YP_004128550.1| ribosomal protein l17 [Alicycliphilus denitrificans BC]
MRHGHGLRKLNRTSSHRLAMLQNMMNSLIEHEAIKTTLPKAKELRRVIEPMITLAKEDSVANRRLAFNRL
RDRDSVTKLFNDLGPRFKARPGGYTRILKMGFRVGDNAPMAFVELVDRAEESGDTSAEG
>gi|319764614|ref|YP_004128551.1| DNA-directed RNA polymerase, alpha subunit [Alicycliphilus denitrificans BC]
MQTNLLKPKAINVEQLGHNRAKVELEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAGVLHEYSSIDG
VQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEIVNPDHVIATLSAGGKLDMQI
KVEKGRGYVPGNLRRFADESTKSIGRIVLDASFSPVKRVSYTVESARVEQRTDLDKLVLEIETNGAISAE
EAVRASAKILVEQLAVFAQLDGGEIFESQATGARAASGATFDPILLRPVDELELTVRSANCLKAENIYYI
GDLIQRTENELLKTPNLGRKSLNEIKEVLASRGLTLGMKLENWPPAGLDKR
>gi|319764615|ref|YP_004128552.1| ribosomal protein s4 [Alicycliphilus denitrificans BC]
MVAPAVRCGSRQFKDIEVARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSKPGQHGRTSGARTSDYG
LQLREKQKVKRMYGVLEKQFRRYFEAAERRKGNTGANLLALLESRLDNVVYRMGFGSTRAEARQLVSHKA
ITVNGQSVNIASYLVKTGDVVAVREKSKKQARIVEALQLAQQVGMPAWVEVNADKVEGTFKQVPDRDQFG
ADINESLIVELYSR
>gi|319764616|ref|YP_004128553.1| 30S ribosomal protein s11 [Alicycliphilus denitrificans BC]
MAKSPANNAAQRVRKKVRKNVSDGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSRKSTPFAAQV
ASEVAGRAAIEQGIKNLDVEIKGPGPGRESSVRALGALGIRITSISDVTPVPHNGCRPQKRRRI
>gi|319764617|ref|YP_004128554.1| 30S ribosomal protein s13 [Alicycliphilus denitrificans BC]
MARIAGINIPPHQHTEIGLTAIYGIGRTRARKICEACGIAYSKKVKELTDADLEKIRDQIAQFTIEGDLR
RETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAALKK
>gi|319764618|ref|YP_004128555.1| ribosomal protein l36 [Alicycliphilus denitrificans BC]
MRVSASVKKICRNCKIIRRKGVVRVICTDQRHKQRQG
>gi|319764619|ref|YP_004128556.1| preprotein translocase, secy subunit [Alicycliphilus denitrificans BC]
MATNAAQLAKTGKFGDLRRRLVFLLLALVVYRVGAHIPVPGIDPAQLQQLFSGQQGGILNLFNMFSGGAL
SRFTVFALGIMPYISASIIMQLMTYVLPTFEQMKKEGEAGRRKITQYTRYGTVGLAVFQSLGIAVALESS
AGLVLSPGFGFRMTAMVSLTAGTMFLMWLGEQITERGLGNGISILIFAGIAAGLPSSIGGLLELVRTGAM
SILAAIFIVIVVALVTYFVVFVERGQRKILVNYARRQVGNKVYGGQSSHLPLKLNMSGVIPPIFASSIIL
LPATIVNWFSAGESMRWLRDISGALTPGQPVYVMFYAAAIVFFCFFYTALVFNSRETADNLKKSGAFIPG
IRPGEHTARYIDKILVRLTLAGAVYITFVCLLPEFLILKYNVPFYFGGTSLLIIVVVTMDFMAQVQNYMM
SQQYESLLKKANFKTTPGT
>gi|319764620|ref|YP_004128557.1| ribosomal protein l15 [Alicycliphilus denitrificans BC]
MELNSIKPAAGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGYHKVGFEGGQMPMQRRLPKRGFKSQS
LKFNAEITLSALNALDQAEIDVLSLKQAGLVPALAQVVKVIKSGELTKAVKLTGIGATAGAKAAIEAAGG
SLA
>gi|319764621|ref|YP_004128558.1| ribosomal protein l30 [Alicycliphilus denitrificans BC]
MTTQQTIKIQLVRSPIGTKESHRATVRGLGLRKLNSVSELKDTPEVRGMINKISYLVKVL
>gi|319764622|ref|YP_004128559.1| ribosomal protein s5 [Alicycliphilus denitrificans BC]
MAKFQPKVQDEGRDDGLREKMIAVNRVTKVVKGGRILGFAALTVVGDGDGRVGMGKGKSKEVPAAVQKAM
EEARRKMMKVSLKSGTIHHNVTGHHGAAVVMMAPAPKGTGIIAGGPMRAVFEVMGITDIVAKSHGSSNPY
NMVRATLDALANSTTPAEVAAKRGKTVEDLFAA
>gi|319764623|ref|YP_004128560.1| ribosomal protein l18 [Alicycliphilus denitrificans BC]
MLTKKEQRLRRARQTRIRIAQQGIARLTVNRTNLHIYASVISGCGTKVLASASTAEADVRKSLGGSGKGG
NTAAAQIIGKRIAEKAKAAGIEKVAFDRAGFAYHGRVKALAEAAREAGLQF
>gi|319764624|ref|YP_004128561.1| ribosomal protein l6 [Alicycliphilus denitrificans BC]
MSRVGKSPVSIPAGVDVSIKDDQISVKGSGGTLSLAQNALVKVSSNDGKLSFEPVNDSREANAMSGTVRQ
LVNNMVQGVSKGFEKKLTLIGVGFKAAASGSKLNLNVGFSHPVNFEMPAGITVATPTPTEVVIKGADRQV
VGQLAAEIRAVRPPEPYKGKGIRYADEKVVIKETKKK
>gi|319764625|ref|YP_004128562.1| ribosomal protein s8 [Alicycliphilus denitrificans BC]
MSMSDPIADLLTRIRNAQMVSKATVSVPSSKVKVAIAQVLKDEGYIDGFEVKADGGKSELQITLKYYAGR
PVIERIERVSRPGLRVYKGRDSIPQVMNGLGVAIVTTPKGVMTDRKARATGVGGEVLCYVA
>gi|319764626|ref|YP_004128563.1| ribosomal protein s14 [Alicycliphilus denitrificans BC]
MAKVALIQRELKREKLAAKYAAKYAELKAIAGDAKRSDEEREAARLGLQKLPRNANPTRQRNRCEITGRP
RGTFRQFGLGRAKIRELAFAGDIPGVTKASW
>gi|319764627|ref|YP_004128564.1| 50S ribosomal protein l5 [Alicycliphilus denitrificans BC]
MARLQQLYREKITPELIKQFGYTSPMQVPRLTKITLNMGVSEAVADKKIMDNAVADLTKIAGQKPVVTKA
KKAIAGFKIREGQAIGCMVTLRGAQMYEFLDRFVTVALPRVRDFRGISGRAFDGRGNYNVGVKEQIIFPE
IEYDKVDALRGLNISITTTAKTDEEAKALLSAFRFPFKN
>gi|319764628|ref|YP_004128565.1| ribosomal protein l24 [Alicycliphilus denitrificans BC]
MNKIRKGDEVIVIAGRDKGKRGTVTLRKDDSHLVIEGINLVKKHVKPNPMKGTTGGIVEKAMPIHQSNVA
IFNAATGKADRVGIKVQADGTRVRVFKSNGAEIKAA
>gi|319764629|ref|YP_004128566.1| ribosomal protein l14 [Alicycliphilus denitrificans BC]
MIQTESRLDVADNTGAKSVLCIKVLGGSKRRYASVGDIIKVSVKEAAPRGRVKKGEIYSAVVVRTAKGIR
RGDGSLVKFDGNAAVLLNSKLEPIGTRIFGPVTRELRTERFMKIVSLAPEVL
>gi|319764630|ref|YP_004128567.1| glycerol-3-phosphate dehydrogenase [Alicycliphilus denitrificans BC]
MNTPSQDPPLTTDRAELLARLAQPRTYDLAVVGGGATGLGVALDAAARGFSVVLVESHDFAKGTSSRATK
LVHGGVRYLAQGNIALVREALHERTTLLHNAPHLAQPLAFVMPSYKLWETPFYGVGLKMYDALAGQAGLG
ATEFLGRMDTLRCLPTVRAEGLKGGVKYWDGQFDDARLALALARTAAQRGALLVNYCPARGLLHEGGKLV
GLVCEDAETGRRFDLRARAVVNATGVWVDELRQQDGQALGRPVRPMVAPSQGVHIVVDREFLPSDHALLV
PKTADGRVLFAVPWLGKLILGTTDSPRQDLAREPLAFKEEVDFILNESAKYLRRAPLPEDVRSIWVGLRP
LVKPQDDEGGNTKAISREHTVLASASGLVTVTGGKWTTYRAMAEDVLKKCFDEGLLPARAAGVTQRLPLA
GAPLEPPRRRMCDAQGLHSYGLDAAAVLQLPGADQWLAEGLSEAMVRFAARHEYARTVEDMLARRSRLLF
LDARLAARLAPRVAAILQEELGLDPQLAAFQALAQQYQHLPA
>gi|319764631|ref|YP_004128568.1| regulatory protein deor [Alicycliphilus denitrificans BC]
MNHNPRQLQLLAHVREHRSASVEHLAEALGVTLQTVRRDVQRLAEQGLVARFHGGVRLPGSTVENLAHTQ
RESLNAEGKARIARTVAAQVPQGCSLILNIGTTTEAVARALLQHRGLRVITNNLNVAAILCENPDCEVIV
AGGVVRARDRGIVGEAAVDFIRQFRVDIALIGISGIESDGTLRDFDLREVKVAQTIVAQAREVWLAADQS
KFNRPAMVQLATLDQIDRLFTDAPPPEPFPALLQEAQVRCTIA
>gi|319764632|ref|YP_004128569.1| glycerol kinase [Alicycliphilus denitrificans BC]
MTYLLALDQGTSSSRSIVFDAQGRVVAQAQQELPQIYPRPGWVEHDPREIWRTQLATAREALARAGLSAG
GIHALGITNQRETTVLWNRATGQPVHHAIVWQDRRAEPACARLRAQGHAGLIQSRTGLLIDAYFSATKLQ
WLLDNVPGARAQAERGELAFGTVDSWLIWQLTGGRRHVTDVSNASRTMLLNVHTNQWDEELLALLRIPRA
LMPEVLPSASDFGATDPGLLGGAIAIGGVAGDQQAALFGQACFSAGMAKNTYGTGCFMLMHTGGSFQKSE
NGLLTTSAAQPDRQAQFALEGSVFVGGAVVQWLRDGLRAIPASSEVQALAESVPDSGGVMMVPAFTGLGA
PYWKPDARGTITGLTRGTTLAHIARAALESIAYQSAALLGAMSRDAVAAGSAPVSELRVDGGACVNDLLM
QFQADLLGIPVVRPACVETTALGAAYLAGLSSGVYASQEELARLWRAERRFVPTLPRDQAEALMARWEHA
VAQAVLPAPGA
>gi|319764633|ref|YP_004128570.1| pyrroline-5-carboxylate reductase [Alicycliphilus denitrificans BC]
MTASTLFLPPIAFIGGGNMASAIIGGLIRQGLPASQIEVVEPFEATRTALQQQFGITAQPAATAALARAG
LVVWAVKPQTFKEAALQVAPHTTRALHLSVAAGIRTDSIARWLGSERIVRAMPNTPALIGQGITGLYARA
GRVGAPERALVEQVVATTGAYLWVEQESLLDAVTALSGSGPAYVFYFLEAMTNAGVDMGLTQAQAHQLAV
GTFAGAAELARRSEEPLSVLRERVTSKGGTTHAAIQSMETDEVAQRFMRALDAAENRARELGDEFGSAG
>gi|319764634|ref|YP_004128571.1| spore coat protein coth [Alicycliphilus denitrificans BC]
MHCRPSLRIHPAVLGACLALASCGGGDYESLPEPPPQSQAPFAPGPDDLPRAQGLYPYATPALLTLDLGY
QPTPVSGPGWYLAGKDSCQQLASPPPSYPGGMVTLDTVDLDENKADNCEPEIKVLATSGDGQVVNAAAKM
RMRGSSTREATLKSYRVKFDKGAAWWGEDTLNLNKHPYDLTRVRNKLAFDLMRTVPYHESLRTQFVGIRY
DAADGAGPRPMGLYTHVEKLGGKSYLAFRGWAAGSNVYKVASFNFNADARLQTLAGGKAGPDFEQLLEIE
SDAGNHQAIVDAVKALDSDETPFQATFARYFDRNNYLAWLATAILLGNWDTANQNFGLYQPLGGEKFYFL
PWDYDGALGYAQQPGAAAYPSWNRGLSSWWDSALHRRFLSAPGNLALLQAAVEEIRGKYLTDAAVRQLLD
SYRPIVEPILARAPDVDQLDARGQGTPMEQWAAEYQRLQTVIGANHGFFLESLQRPMPYWLAGSDKGGSL
ELDWSWPAPFHPQGRAIGYRVEVARAEAGQPAFASGTLVQAPASVSGRTTLSVGALPAGQYLVRVTASDP
EGHSTTAFDKTTFDGQRIDGAICLQMPGATPCGP
>gi|319764635|ref|YP_004128572.1| 4-hydroxybenzoate polyprenyl transferase [Alicycliphilus denitrificans BC]
MTAVAARSRLSLYLDLIRFNRPAGWLVLVWPTLVALWVAADGFPGWHLLLVFAAGTPLMRSAGCCINDIA
DRDFDRHVKRTTQRPITSGRISVAEAALVGAALALVSLALVLSTRWEAVAWSVPAVAFTILYPFTKRFFA
MPQAFLGLAFNFGIVIAFAAVQGRVPATGWVLWLANMFLVLAYDTEYAMVDRDDDLKIGMKTSAITLGRF
DVAAIMAFFAACLALTAWVLAPYGLGWPLWLGLAVAAAQVLWHYRLIRGRTREGCFAAFSSSHWIGASIF
AGVVLGFALR
>gi|319764636|ref|YP_004128573.1| ferritin dps family protein [Alicycliphilus denitrificans BC]
MAKAGNSMKKTATPAGAPAINIGISEKDRAAIAKGLSRLLADTYTLYLTTHNFHWNVTGPMFNTLHTMFM
EQYTELWNAVDPIAERIRALGHVAPGSYGAFGKLSSLQDAPAEPPKAFDMVRTLVQGHEAVARTARELFP
MADKVCDEPTADLLTQRLTVHEQTAWMLRALLEE
>gi|319764637|ref|YP_004128574.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MTLTELKYIVAVAREKHFGRAAEACYVSQPTLSVAVKKLEDELEVKLFERSAGDVTVTPLGEEIVRQAQS
VLEQAAEIKEIAKRGKDPLAGPLTLGVIYTIGPYLLPELVRHSIASTPQMPLMLQENFTVKLLEMLRTGE
IDCAILAEPFPDTGLAIAPLYDEPFLAAVPSSHPLAERKSVSAMELKNETMLLLGAGHCFRDHVLEVCPE
FARYASNAEGIRRTFEGSSLETIKHMVSAGMGVTLVPRLSVPRDALHAGARRRKSDDTHIRYLPVKETDG
SAPPMRRVVLAWRRSFTRYEAIAALRNAIYACELPGVKRLS
>gi|319764638|ref|YP_004128575.1| ATP-dependent DNA helicase recg [Alicycliphilus denitrificans BC]
MPRPAASPSARTPAPSPARKALEKLGLTRDIDLALHLPLRYEDETRITPIRSAREGETVQVEGTVTASEI
QMRPRRQLVVTLEDGTGSCELRFFSFYPSHQKAMAVGERLRARGEVRGGFWGRQMLHPAFRKAEGALPAA
LTPVYPTVAQLPQAYLRRAVASALARVDLPETLPPGLEPPLARFDSENGLHRPWGLRESLLFLHNPAPDV
ALATLQDHSHPAWQRLKAEELLAQQLSQLVSKRERARLRAPRLSPAPGAQALHEQLLAALPFSLTAAQRR
VGEEIARDLARAVPMHRLLQGDVGSGKTVVAALAAARCMDAGWQCALMAPTEILAEQHFAKLIGWLAPLL
AARGQQVAWLAGGQKKKERAAMLERIASGGAALVVGTHAVIQEQVRFRNLALAVIDEQHRFGVAQRLALR
QKLQHDGMEPHLLMMSATPIPRTLAMSYYADLDVSTIDELPPGRTPIVTKLIADSRKDQVVERIGAQVAA
GRQVYWVCPLIEESEALDLSNATATHADLSEALPGVTVGLLHSRMPSAEKKAVMEEFKSGRTGVLVSTTV
IEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGAAASACVLLYSTGDSGRLGETARDRLKAMAETTD
GFEIARRDLEIRGPGEFLGARQSGDALLRFADLATDTALLEWARAAAPQMLDRHAALAAQHVQRWLGGKA
DYLKA
>gi|319764639|ref|YP_004128576.1| metal dependent phosphohydrolase [Alicycliphilus denitrificans BC]
MLKRIDVRHLVLGMYLHEFCGSWMEHPFWRSRFLLTDPKDLALIRKTNIREVWIDVSKGLDVTPGTAAVS
REEVDAQVESELHHAGNNQAELPIDLGKDDALKPSAMSDELRRAASICASAKKAVVSMFTEARMGRALDT
QTAQGMVDEISDSVMRNPGALISLARLKTADDYTYMHSVAVCALMVALARQIGMDEQATRLAGLAGLLHD
LGKAAIPLHILNKPGKLTDEEFAIIRSHPEAGHSMLQPSSVHPAVLDACLHHHEKIDGTGYPHRLKGSEI
SVLARMAAICDVYDAITSDRPYKNGWDPSESLRRMAEWTHDHFDGRLLQAFVKTIGIYPVGSLVRLASGR
LGVVTEQNGGSLLAPRVKVFFSTKSDLRIPPEIVDLSAPGCAEKIVGRENPAQWNFPDLNEIWSGLPERP
W
>gi|319764640|ref|YP_004128577.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Alicycliphilus denitrificans BC]
MSTSPRAFTLSDFDFALPEALIAQHPAPVRSSSRLLDGRAAPPSDRIFHELPALLREGDLLVFNDTRVVK
ARVFGEKASGGRLELLIERVLAGNEVVAHMKVSKKPMPGATVHMAGGKAAGGFDATLLSRWPDADGPLFR
FALHGPAGETPWELMERHGHLPLPPYIERQQNAGHDPDEAEDAERYQTVFARAPGAVAAPTAALHFDDAV
LAALAERGVQRASVTLHVGAGTFQPVKTESLAEHRMHSEWYEVPLATLAALERCRMRAGRVVAVGTTTVR
TLESWARSGQTTGETDIFITPGFQFQVVQLLVTNFHLPKSTLMMLVSAFAGYEHVMQLYRHAIEERYRFF
SYGDSMLLERKNDPTHP
>gi|319764641|ref|YP_004128578.1| hypothetical protein Alide_3985 [Alicycliphilus denitrificans BC]
MTASANRRRSALSGIALTVGACACFALLDMSTKLVGATVPLFMALWLRYLFQSLLTSAWVLPRTGWRWPR
TRHPRFQMLRAALFAGTSLFGFLSIRFMPLPEFTAIVAATPLCVTLVAALWLRQPVSPLRWVLVATGLAS
VMLILRPGGGAFTWAMLLPLAMLALATGYQILSSLMAGQEDPATTQFYTGWIATALTSLGAPFVWTHIAS
PWVWLGTFVMGLSSALGHLMLLRAYARTTPATIAPFLYTQIGFAMLAGWAVYGHMPDGWSLVGMGLIAAS
GAASAWLTVRETR
>gi|319764642|ref|YP_004128579.1| gamma-glutamyltransferase [Alicycliphilus denitrificans BC]
MHHDAKTLDWSLPYASHRSAVMGRNIVSTSQPLAAQAGLSMLLAGGNAVDAAIAAAMALTVVEPTGCGIG
SDGFAIVWDGKELHGLNASGRSPAAWTPEYFAKLGGIPEKGWNAVTVPGAVSAWVALSQRFGRLPFARLA
QPAIGYARQGFPVSPTIARLWELGRAKLGEQPGFAECFLPNGRAPRAGEVFRSEAHARTLELIAATQGEA
FYRGELAEKMAAHSQANGGAMTEEDLAAHQADWVGTVSQRFGDSVIHEIPPNGQGIAALMALGMLDALGV
GDQPLDGVDSVHLQVEAMKLAFADLHQYNADIAHMRVVPADLLRPEYLRERAALIDPARAGAPTYGAPRA
GGTVYLAAADAQGMMVSFIQSNYMGFGSGVVVPGTGISLQNRGHGFSLTPGHANEVGPRKRPSHTIIPAF
AMNADGTPQMAFGVMGGPMQSQGHTQMALRVLRYGQNPQAAADAPRWRVTGGKGVAVEPNFDAAVVEQLR
ARGHEVTVEAGNGVFAFGGAQLVLRQGDVYVAGSDPRKDGCAVAF
>gi|319764643|ref|YP_004128580.1| hypothetical protein Alide_3987 [Alicycliphilus denitrificans BC]
MRIWALGVALWMAWAGAQAQAWPDKPVRVVVPFPASGATDLVARVVTQRVAQDLGQQFVVDNKPGAGGTI
GAAEAAKAAPDGYTLLLTTSSTHAISPHLMPRLAYDARKDFTPVAHLADAPSVLLVTPSLPAKSVQELIA
YAKAHPRALNYASSGNGTIVHLNAAAFSAQAGIEMTHVPYKGTALAIPDLAAGQVHLLFDSLPTGMPHVK
SGRLRALAVTSEKRSALAPELPTLAESGLPGYASVTWFGVYLPAGASPALVDRITKAFTKAMQAPEVAAS
LAKLGVEPAAPGTPAQFAAMVQADSARWASVIRQHKISLE
>gi|319764644|ref|YP_004128581.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MRAHQLQDTALRYFLAVAQSGSITEASAHLHVAASALSRQIAGLEAQLGAPLFERHPRGMVLTEAGEILA
RHARRAQLDAEHALGEIGALRGLRAGQVRLATSDAFANELVPRLCADFQRTHQGIQFSVQVLPTAQVPGA
VRGGAADIGLCFSRAPEKDIAVAYRQSAPVLALLPPGHALARARSVTLARMARYPLALPPPETTVRQMID
IVCSRQGLRLEPVLVSNHAKTMLHFVASGGGLSVGSEVAARHMVAAGALVARPIGDQSMDLRDLQVQTLA
GRSLPVAAQAFLALLCESLAG
>gi|319764645|ref|YP_004128582.1| uracil-DNA glycosylase [Alicycliphilus denitrificans BC]
MNDAPRSPTQLMSADPADWPVAPGWQPLVDGFFAGERGQALLAFLHARLEAGAAIFPPKPLRALELTPPE
QVRVVILGQDPYHGRGQAEGLAFSVAPGVRLPPSLQNIFKEMQRDLGVPFPPFPDPGGSLVKWARNGVLL
LNTCLTVEEGQAASHSGRGWEQLTDAVIHHVADGDRPVVFMLWGSHAQSKRAFIPRDRGHLVLTANHPSP
LSALRPPVPFIGCGHFGKARAFREQHGY
>gi|319764646|ref|YP_004128583.1| indole-3-glycerol-phosphate synthase [Alicycliphilus denitrificans BC]
MSDILSKICGVKAEEVAAAKKRMPLADMRRDAESRVLTRDFVGALRAKIGAGQAGVIAEIKKASPSKGVI
RADFIPADIAQSYAEGDGKVSAACLSVLTDRQFFQGQPDYLKQARASCTLPVLRKDFMVDPYQIYESRAM
GADCVLLIAACLDDAQMADMEAIAHGLDMAVLVEVHDGAELERALRLKTPLVGINNRNLRTFEVSLQTTL
DLKKHVPADRLLVAESGILAPDDVRTLRDAGVNAFLVGEAFMRAPDPGLALARLFA
>gi|319764647|ref|YP_004128584.1| hypothetical protein Alide_3991 [Alicycliphilus denitrificans BC]
MSLLDAPIWRDAGTWIVLGVSLLFVVVGIAMHCAVRKVLRAPQPDQPSRD
>gi|319764648|ref|YP_004128585.1| anthranilate phosphoribosyltransferase [Alicycliphilus denitrificans BC]
MITPQEALQRTIEHREIFHDEMLHLMRLIMSGELSPVMTAAIVTGLRVKKETIGEITAAAQVMREFSRKV
HVADTRQLVDIVGTGGDGANTFNISTCATFVIAAAGGKVSKHGGRGVSSKSGSADAMEALGVHINLTPEQ
IAECIAEVGIGFMFAPNHHPAMKNVAPVRKELGVRTIFNILGPLTNPAGAPNILMGVFHEDLVGIQVRAL
QRLGAEHAVVVYGRDGLDEISLGAGTLVGELKDGVVREYEIHPEDFGLRMAGTRALRVESPEESKALLLE
VLKGAEGPARDIVCLNAGAALYAAGVAPSIAEGLARAQAAIDSGAALAKLDALAAFTRRLAAA
>gi|319764649|ref|YP_004128586.1| glutamine amidotransferase of anthranilate synthase [Alicycliphilus denitrificans BC]
MRLLMIDNYDSFTYNIVQYLGELGAEVEVFRNDEITLEGIAARAPDRLVISPGPCSPAEAGVSVAAIQHF
AGRLPILGVCLGHQSIGAAFGGRIVRAQELMHGKTSVITTTQKGVFAGLPRQFTVNRYHSLSIERASCPE
VLEITAWTDDGEIMGVRHKTLPIEGVQFHPESILTEHGHAMLKNFLEQA
>gi|319764650|ref|YP_004128587.1| receptor protein-tyrosine kinase [Alicycliphilus denitrificans BC]
MHKDIPTSKVFYRPIEAAIRWAGLLRYLPMILAAIASPRFLPPSLNCPRWNECRLYSERIYDGILNGELP
YGQNGITLNDPKLLQSPDLTVRHVDLKRWMRNHYPEHRPGFLFSRGERMAHPFITLETGQAILIERLALQ
AALEHARRQMQELQEQRDTLLKQSTALLASKQCEISERAETTYLNIIGGMLTLMLGQSPSGVPYSSFKTQ
EALVSALVAHFGGTMGITERTLNGKFANARKYVRSASA
>gi|319764651|ref|YP_004128588.1| prophage cp4-57 regulatory [Alicycliphilus denitrificans BC]
MSQPPVLPPNERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQALRLGVRAVGWDSIEIDQWIAERLNHRT
>gi|319764652|ref|YP_004128589.1| cobyrinic acid a,c-diamide synthase [Alicycliphilus denitrificans BC]
MQVVSIISTKGGVGKTTTAANLGGLAADAGLRVLLLDLDVQPTLSSYYELTQRAPGGIYELLAFNERDLG
QLVSRTIIAGLDLVLSNDHRGELNTLLLHAPDGRLRLRHLLPALAPLYDLVLIDTQGARSVLLEMAVLAS
DLALSPVTPEILAARELRRGTMQLLEDIAPYRHLGIEPPPLHLLINRVHPVSANARLIQQALRDLFQDHA
GIRVLATDVPAIEAYPRAATRGLPVHRVEHRQPPGRVAPASLDTMRALASELFPQWQDRFAAMSGRPPRP
LDAGRSHGERT
>gi|319764653|ref|YP_004128590.1| hypothetical protein Alide_3997 [Alicycliphilus denitrificans BC]
MANAHELARGHKRLRALIEFAVGEGWHVKRTPGGHLKFTKAGCAAIYTSSTARDHRAELNARAQIRRAER
EARMAPAGGRGDCEGCGHG
>gi|319764654|ref|YP_004128591.1| hypothetical protein Alide_3998 [Alicycliphilus denitrificans BC]
MADMTSQDMAGKLLAAGFERSGPAATALSDPIADTPMVVTLDQLRPYDHDPRMKRNPAYEEIKASIRERG
LDAAPAITRRPGEDHYIIRNGGNTRLAILRELWSETKDERFFRISCLFRPWPERGEIVALTGHLAENELR
GGLTFIERALGVEKAREFYEQESSAALSQSELARRLAADGFPVQRSHITRMADAVRYLLPAIPTVLYGGL
GRHQVERLSVMRTACKRTWEHYAKDRTLPLDFDSFFQEVLAQFDTQGDEFATQRVQDELIGQMSELLGIG
YDVLALDLTESESRHRALVSDPTPPAAPPALPSPTAGTPPPPGVASSIAKPAAAASPPPASPPASEPTLR
EDTARETTTESPAAAPGDLLLEHIVSPAPTTERLQSIQRMVADQLGDALPPDFSASVLQSIPVQAGGLYP
ISDVWYIDAGLDTPDRLRIHIAQFAREIAGEAALDECIEDRSDGIGFVCCAPAHAPSPLGRAVLALLITL
TGQPTAEAGVDGAQLAADLPALLHGQGQHHGDCTRRLSDTALVKLFRLLRLARRLLDLEAGTTAPGT
>gi|319764655|ref|YP_004128592.1| hypothetical protein Alide_3999 [Alicycliphilus denitrificans BC]
MSTSHPLNQAVIAQALYDLRNGQLRRCKAMGFGEAELDALKHPALISVLANASVSWCSVTVNREVLQRLL
NQAQDVEKEIATVDRMLRLGASTEMVSRFYGLTHQEVALRREILGLPKRKGRHPVLDETQDTELWRQWKA
VTSSRNVDLEDETSILDAAMDLAEGMSLPLSVVWAAIRNWVDQGLD
>gi|319764656|ref|YP_004128593.1| hypothetical protein Alide_4000 [Alicycliphilus denitrificans BC]
MAVDDTAPRAPRQGPIALADLFDAALKDLTPNPNPRAPAPMAVPTPAASGDAFLFSGNRHESVPRRLFVD
RRLTPLERNAWQVFRLMLNDDGVTTFPTYEQLRPWLASMPCAGQASHETVARALTLLRLTRWLSLVRRRR
DPKTGRILGNLYVLHDEPLTLFEAMQLDADYLALVSQSLGHSAKAVQVVGLNTLQEIADDPMLSGRTLPS
RLQVLAERLADQGITATASYPQEDAIHDSEEGPASLLRNGERPSSESEAGPKPAPDGALRNPKQDRTVRS
SRIDEVRTTAQARALGDLQWPKRFAELKAEQQAGARMALQQVDAALRQAVLDEWAARCGKHGIRNPAGYL
FGIIQRAMRGEFNAWAKQTSPAAPTPSAARAPPPEPPRNVVPPAVARQHIERLRDLLRKS
>gi|319764657|ref|YP_004128594.1| hypothetical protein Alide_4001 [Alicycliphilus denitrificans BC]
MATSNEPLQLNLGSLRSAMSLTLHTHHASRIWHGRAAAEGRPGIVGLNGYIAVMNKMKRGSEQDDPYSDW
WMLRIEDKLDQTRTTLQTLRKQVDQALAGVPAALSLGENLNVQPVKLPLFVNAQLGFAAVYLLADYDDIA
RKLILAHHTALIDRSTLERWLNEGAHALRSLFSLAQQYRYSGCTRDDFAAKNAAARVALEKFGELPQDVL
EGTRRSTFAPPMVRRGLQQRGENPAAAATSVDGDAAAAADPSEGAATAGEDESA
>gi|319764658|ref|YP_004128595.1| hypothetical protein Alide_4002 [Alicycliphilus denitrificans BC]
MSDLNQPTRYFRGLQQGAFMRLEHAASLKGLLKPFKGKGDLEAWASQCFAMRDELIGLAQRQVLQQAGGH
PFHLLPVELAQQTTGAGTTFLRWRRNDRSAMGVALWQELMASTSTPVNLLADLHAIELQRITLNMQISLL
HTLGRQAQECASKAAEAEDAYLRRLASIPPGVRDR
>gi|319764659|ref|YP_004128596.1| single-strand binding protein/primosomal replication protein n [Alicycliphilus denitrificans BC]
MSTHFSGEGNIGSPPEYREFPNGNDEPRRLLRLNVYFDNPVPTKGGDFEDRGGFWAPVEIWHRDAAHWKD
LYQKGMRVLVVGRMEREPWTDNEDQPRETWQINARSVGILPFRIESVVLSPKSQETAQDAQPKPQAAQEP
AASKEPKRRK
>gi|319764660|ref|YP_004128597.1| DNA topoisomerase [Alicycliphilus denitrificans BC]
MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEVYDAALKRWSLEQLPIIPQQ
WRVEVKPKTATQFKVVKALLAKATQLVIATDADREGELIAREIIDLCGYRGPIERLWLSALNDASIRTAL
AKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIAAF
VSVPYWAIDVSLSAGGQTFTAQWVAPDASTDDAGRCLRQPVAQQAAQQIRAAGSAQVVSVETERVREGPP
LLFDLGTLQEVCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPTLA
QIMGQLDRTQRSRAWNDGKVVDFHAKLTHHFHRILTHPDS
>gi|319764661|ref|YP_004128598.1| istb domain protein ATP-binding protein [Alicycliphilus denitrificans BC]
MRHDPAIASIVIMLRELKMHGMAQAVAELAEQGAPAFEAAQPILSQLLKAETAEREVRSVAYQLKVARFP
AYRDLAGFDFSHSEVNEALVRQLHRCEFLEDANNVVLVGGPGTGKTHIATALGVQAIEHHHRRVRFFSTV
ELVNALEEEKAQGKTGQMAHRLAYVDLVILDELGYLPFSASGGALLFHLLSKLYERTSVVITTNLSFSEW
ASVFGDAKMTTALLDRLTHHCHILETGNDSYRFKNSSAQQPPQTTKKEKATKNLSTT
>gi|319764662|ref|YP_004128599.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MIDVATLSVIRRWALREQLSIREIARRTGLSRNTIRKYLRAGEAEPHYAKRVSPSKLDPFALKLSGWLKT
EAGRSRKQRRTVKQIYADLQALGYTGSYNRVAAFVRLWQEQRLVAQQTTGRGTFVPLAFGPGEAFQFDWS
EDWAVLAGVRTKLQVAHFKLSHSRAFYLRAYLLQTHEMLFDAHNHAFVVLGGVPRRGIYDNMRTAIDRVR
RGKERDVNARFAAMVSHFLFEAEFCNPASGWEKGQVEKNVRDARHRLWQVVPPFPSLPDLNAWLEERCVA
LWHEIEHGKLAGTVADVWAEERAALMPVPRPFDGFVEHTKRVSPTCLVHFERNRYSVPAPYANRPVSLRV
YADRLVVAAEGQIICEHQRLIERNHHGAGQTVYDWRHYLAVLQRKPGALRNGAPFQELPVAFKRLQTALL
MQPGGDREMVEVLALVLHHDEQAVLAAVELALESGAASKTHILNVLHRLLDGKPAPAPVTSPQALKLAME
PQANVLRYDQLREVRYAS
>gi|319764663|ref|YP_004128600.1| hypothetical protein Alide_4007 [Alicycliphilus denitrificans BC]
MWLFDRRCVKPDKANASALALLPRDSAHRLDRLWMLVRDTCPLPLLDHWRETVLELLQTREMLARLPFAL
GPLEGHRLAIDVPALTLALGSLIRSDVLTAYPYPAKIWTPEAVAA
>gi|319764664|ref|YP_004128601.1| hypothetical protein Alide_4008 [Alicycliphilus denitrificans BC]
MALMFPRLARNFAKNGYYPTDEPTLERALNALMPSDGPMCILDPCAGEGVAIAEAAHALGREQAKAFAVE
FDAERARHARGLVDHCLHADLMDTMVSKQSFGLLWLNPPYGDLSKDVNGNIGYQGQGRARLEKLFYQRSL
SLLQYGGVLVFIVPGYVLDAELVGWLTRHYTDLRIYRAVETQFKQVVIFGRRVRQRELASDSGKAVRNLL
LQIGLGEVEPEELPSDWPFLPYIVPASPAEPEYFFRVTMEPEQFADEVGRLQGLWPSLDTHLGAAQQSLR
PPARALSHWHLALALAAGAISGVVRSKTGRVLVVKGDTHKDKTLQREFTEREDGSIAETRILTDKFVPVI
RAWDMTPGSPTRGEVLTIR
>gi|319764665|ref|YP_004128602.1| hypothetical protein Alide_4009 [Alicycliphilus denitrificans BC]
MFPNPFKRPAPHKQPLFAPASLQLSEKVHWLARRGLIDPLSYVQRHVRGDWGEIDEATRQANDVALDQDN
LMISQYRITPELVLIVKTSEDHQTTVVQLPEERDLI
>gi|319764666|ref|YP_004128603.1| hypothetical protein Alide_4010 [Alicycliphilus denitrificans BC]
MASHRIETYCQRLAFPIGALIFSRAVDHLVRAGRLDPIPYFRRHTRGDWGDVNVQQWQANSTALQSGASL
ESHYVIHPGLAIRIVTDAQRSATVIVLPSED
>gi|319764667|ref|YP_004128604.1| dead-like helicase [Alicycliphilus denitrificans BC]
MSLDLETTTAEATPVQGELLDAESNPLTLSLQDFVGEFGDELLDALNSANPPVYTGQPQAHRQVIVASLK
RKLFPAQAEVVHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRRE
IQETVAGAKVWVLNGPDTLVKLIKLREQLGVQPTGQEFFVLGRVRMRMGFHWKPVFTTRRTRHGDVAACP
DCGTVITDLDGEPVNPVALEAEEYRRKCGHCAAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEITAQK
LMKRFGDGFLASMLGDNVHEFINLMDGNGELVFSDRQATRMERAMASMEFGFGEGGYQPSEFIKRYLPQG
TFDLLVADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLFHLLFRALPGRMIEDGYRPTT
SGSMTSAAMAFMRDHGVLKDIYSESTGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPFTIFLKLKDIG
GNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVHP
RTRNTLAFVPAQFNEFEISPKERELIDICKEEKAQGRKVLAYTVYTGTRDTTSRLKVLLEQEGFRVAVLR
ASVDASRREDWIAEQLDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQQAARRSWRIGQKQHV
RVIYLGYAATSQMTCLELMAKKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA
>gi|319764668|ref|YP_004128605.1| integrating conjugative element protein pill, pfgi-1 [Alicycliphilus denitrificans BC]
MCPSPPWFHHPERRLLAGFLGLLWSVLAGGCATTTAPVALDTIEEVSAAPEPEAPEYIPVVRYARYTLVE
LAPMAAQRDLLLQTIDVSMPEDARATVGDGLRHVLKRSGYGLCQTAHAVIELYALPLPAAHLHLGPMTLR
DALLTLAGPAWELHADDRARQICFDRPGDRVAVEPTPEPSAADAVQTFPLMPSIPGGQP
>gi|319764669|ref|YP_004128606.1| hypothetical protein Alide_4013 [Alicycliphilus denitrificans BC]
MNAPQPSRRPTAAVVVQSLLWLWLIGLSVIVALGYLAMRDQTDQDRLDSRLQRLEAQATGLAETIEAIQQ
RPAVATAADLKDTRQILEARAAQVEKSLNGYAAADDLQALRAEIEQIKTRQTAARAAAPVQARAPSKPAA
SKAEPPPLPFRVVGAELRAGQRSVSVAPTAGDLTPDQLQVLLPGDAVGPWRLQAVEGNTAVFQAGDQTRR
VAIP
>gi|319764670|ref|YP_004128607.1| hypothetical protein Alide_4014 [Alicycliphilus denitrificans BC]
MKPSILLSVLVLASVQWPAWAQQPATAPARNAQSQERPLAARVLDDRTASEWGLQRQEWERYRELMDGPL
GIYSPNLDPLSALGIEARTDEERRRYAELQVQVEARRVEKLLAYQRAYDEAWQRLNPGMQRVNLPDDKPG
AVATRGSGRMAVFVKDGCAACGQLVQRLQSSGAEFDLYMVGSRQDDARIRDWAKRAQIDPARVRAGSITL
NHDSGRWLALGLSGDLPAAVREVNGQWQRQP
>gi|319764671|ref|YP_004128608.1| lytic transglycosylase catalytic [Alicycliphilus denitrificans BC]
MAAPAVAARVSQFLRALVLAAGLYTCTGHAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGLRRNGRIVP
WPWSLNVAGQSRRFATRADACAGLQQAMRATPHTRIDAGLGQINLGYHKHRFTSACDLLDPYRNLAIAAE
ILKEQHTSGEDWLLAIGRYHRPAGGEPAARYRRSVSRHLARVQGARPTAAVLAARQETSP
>gi|319764672|ref|YP_004128609.1| hypothetical protein Alide_4016 [Alicycliphilus denitrificans BC]
MTKPHPAHLAFTVLLVLLAGLPLASRAGEPLIVVEDHGGTSALPYYEALNLQPRANAPARPPIPTPRVPA
TPADEAAMLPVRSTKLTPGTVARRVIEAPGLRPFAVIGDDEASRAWLQRRGAALRERGAVGLVVNVETVQ
GLARLRTLAPGVPLAPVAGDDLADRLGLRHYPALITATGIEQ
>gi|319764673|ref|YP_004128610.1| hypothetical protein Alide_4017 [Alicycliphilus denitrificans BC]
MSGKQPVEVLLRPAVELYTVAACAGAAFLCLVAPWSLALSPAMGVGSALAFGAYGAIRYRDARVILRYRR
NIRRLPRYVMTSKDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYVEPTPAYRLARRLEERLEFAP
FPLSRLPALTGWDVPMNPVRPLPPVGGLPRLHGIEPDEVDVSLPLGERVGHSLVLGTTRVGKTRLAELFV
TQDIRRKNAAGEHEVVIVIDPKGDADLLKRMYVEAQRAGREGEFYIFHLGWPEISARYNAVGRFGRISEV
ATRIAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPDYMLIQRHVINIDALFIEYAQHYFAKTEPKA
WEVIVQIEAKLNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSAVRYDKTYFDKIVASLLPLLE
KLTSGKIAQLLAPNYSDLADPRPIFDWMQVIRKRAIVYVGLDALSDAEVAAAVGNSMFSDLVSVAGHIYK
HGIDDGLPGASAGARVPINVHADEFNELMGDEFVPLINKGGGAGLQVTAYTQTLSDIEARIGNRAKAGQV
IGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTIVSGATDSSDIRGATDFTSNTQDRISSTSVPMIEPS
HVVGLPKGQCFALLQGGQLWKVRMPLPAPDPDEVMPADLQQLAGYMRRSYSEATQWWEFTSSPALQDASL
PDDLLDDAAPAEPGAVVTGAEDSAGNEASP
>gi|319764674|ref|YP_004128611.1| integrating conjugative element protein, pfl4697, membrane [Alicycliphilus denitrificans BC]
MKDAASTAQREQNQRQGLIVGTITLPFRLLGVLIGSLLFSIVVECVGMHLFWKDQGWRHSQQMLQYELGH
LSNHFTRSVVVQEPGRTAHQLVDTGYEWVFVRSGLLERTSQTAERARAPSQGKSQDGVRNFRYYISQVYV
WAESYLIAAAFTTLTFLVRLLVLVLTLPLILTAAFVGLIDGLVRRDVRRFGAGRESGFIYHRAKASLMPL
AVLPWVTYLALPISVHPLVILLPSAALLGLAVSLTAGSFKKYL
>gi|319764675|ref|YP_004128612.1| hypothetical protein Alide_4019 [Alicycliphilus denitrificans BC]
MVASIWLRAAHRGVPNFLVTALVLGQSPMALAESPAQRQELIAALRQLDALERTVADSAAHTPITPGERY
HFDYPRLLADLARVRAGIRAHLTPSRAQPRDPSELAGDYRTERASEPLPATTAEGKP
>gi|319764676|ref|YP_004128613.1| hypothetical protein Alide_4020 [Alicycliphilus denitrificans BC]
MNGAQVSAFQANSGIAPSAMATVLVGVVFAVLLVWGVWAIRTAYVGWSESRLNQRQFLGVCIRFVAMYLV
LTFFLLS
>gi|319764677|ref|YP_004128614.1| hypothetical protein Alide_4021 [Alicycliphilus denitrificans BC]
MPNRILTSRLAQRAAVALGATALPALSFAQGLPQLENPTRGTGNGIMETIRNYGYDIIMLVALLVVASMF
IGVCYHAYGTYAEIHTGRKTWGQFGLTVAIGAVLLVIGIWLLTEATGIL
>gi|319764678|ref|YP_004128615.1| hypothetical protein Alide_4022 [Alicycliphilus denitrificans BC]
MSEQQHVRADGTVTFLPHRLNRHPVVVRGLTADELWICCGLSGAAGLLVGAPLSWMFRTIALAPTFVVLG
VALGVFIGGGILRRLKRGRPDTWLYRQLQWRIATRHPLMAGWVGGHVLISRSGFWTTRRSASRGAR
>gi|319764679|ref|YP_004128616.1| hypothetical protein Alide_4023 [Alicycliphilus denitrificans BC]
MSRFKNEIAHLQAHIKTLRLGAGALVIVALVMGGGWWSAPRDLTIHVPPDLRSGSTRKWWEVPPESVYAF
TFYVFQTLNRWPTNGEEDYARNLHTLSPYLTPSCQAFLRADYDYRRSTGELRQRVRGIYEIPGRGYGDDP
TARVRTVSDRDWVVTLDITADEYYGAEQVKRALVRYPVKVTKVDIDPARNPFGLALDCYDGTPQRISTPE
PTRPASGGLSPHAPQGGNTP
>gi|319764680|ref|YP_004128617.1| secreted protein [Alicycliphilus denitrificans BC]
MKHPVLMLLGLLAVAAFPAAQAVEILRWERMPLAVPLKVGQERIVFIDRNVRVGVPAGVGERLRVQSAGG
AVYLRASEPIEPTRLQLQDADTGALILLDIAAEAPKDGEAELEPVRIVEDSSTPARYGDQSNGAEAPARA
QDQSGARPARRETPIPVVLTRFAAQSLYAPLRTVEPLPGVMRINLRRDMDLGTLMPTLPVRALALASWRL
EDQWVTAVRLTNTSAGWVTLDPRVLQGDFLTATFQHEALGPHGVPEDTTVLYLVTRGHGLAQSLLPAIHR
FDPAVHLPQPEAEATERKEADHAQ
>gi|319764681|ref|YP_004128618.1| integrating conjugative element protein, pfl4705 [Alicycliphilus denitrificans BC]
MRSNGLLKWLMIPVAILVLFVGIRLFSGGSTSAPPASDAGAQLTPEEMKALGIEGDTPRDTVATLVAQVK
QLRTELQTALSDNKSQREENQRLRQRENSIDQRINSALESERSNLRRDQEQAASTRQQTEGLLADLQRRL
DSIGGRGGSHADLPVGLGLQGGDEAGMEGGMRWVEPDDAKPAEGRNRGRGTAGGMSFPTSFGPEQSTLQT
TAETVANAGARAAGVKTAKPVYTVPTNSTLMGSVAMTALIGRVPIDGTVNDPYPFKVLVGPDNLTANGID
IPDVAGAVFSGTASGDWTLSCVRGQVRSITFVFNDGTIRTIPEDREGNQQNNQQRDGLGWISDPHGIPCV
SGERRSNAQQYLGSQALITAAGAGVASLIESDSGRMSYVGSDGSIGTVGISGQEAVGQILAGGVRDMSAW
VNKLYGQAFAAVYVQPGAKVAVHLEKPLAIDFDPEGRKVDHRTGESHALELE
>gi|319764682|ref|YP_004128619.1| conjugative transfer region lipoprotein [Alicycliphilus denitrificans BC]
MLSNLNSLARGLALVLAVAALAGCATSKEKLLTHGDRTMMDIWQQEAGDGGGAAGRNAGGQLLDARQSLR
RPLTDADMQAAPAEQMRYTRTARNEVHRQFQRLPNPDLVMYVYPHLAGTDPVPVPGYTTVFPLYQRIQYA
MPGERVEDY
>gi|319764683|ref|YP_004128620.1| hypothetical protein Alide_4027 [Alicycliphilus denitrificans BC]
MRWKLPWPKPAALKLAASGAGDDEQPDGWQRHIEALRQAGIPEPGSAVRGRKPATEADEQALYEVAPSFV
ELLPWVEFLPESRSMLLEDGQSVAAFFELVPLGTEGREPGWLAHARDALENALQDSFDELDENPWVLQLY
AQDEPSFDQYMQTLRDYVQPRARGTAFTEFYLRFFGHHLRAVAKPGGLFEDTVVTRLRWRGQTRRVRMVV
YRRATGQASRRGQTPEQMLNIVCDRLCGGLANAGIQARRMVAADVHDWLLRWLNPRPAMLGPSTEDRERF
YALARYPDETEAGEIELASGRDFSQRLFFGQPRSDVEHGTWYFDGMPHRVLITDRLRMPPGTGHLTGETR
KGDAINTLFDQMPEDTLLCLTMVATPQDVLESDLNHLAKKAVGETLASEQTLKDVHEARSLIGSAHKLYR
GTLAFYLRGRDEAELDRRGLDLANVMLNAGLQPVREDDEVAPLNSYLRWLPCCYNPGKDRRRWYTQLMFA
QHAANLSPVWGRAQGTGHPGITMFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNLLNQVTA
IYRPRLFIVEAGNSFGLFSDFARRLGLTVNRVKLAPGSGISLAPFADARRLIETPSDVQTLDADALDEDL
PPDASAMEADEQRDVLGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAEHCVAEKRTVLTRDVR
NALRTRGQDPTLPEMRRVRLLEMADAMDMFCQGTDGEMFDRDGTPWPEADITLVDLATYAREGYNAQLSI
AYISLISTVNNIAERDQYLGRPIINVTDEGHIITKNPLLAPYVVKITKMWRKLGAWFWLATQNIDDLPRA
AEPMLNMIEWWICLSMPPDEVEKIARFRELSPAQKALMLSARKEAGKFTEGVILSKSMEVLFRAVPPSLY
LALAQTEPEEKAERYQLMQQHGVSELDAAFKVAEKIDRARGIESPALALP
>gi|319764684|ref|YP_004128621.1| dsba oxidoreductase [Alicycliphilus denitrificans BC]
MEQKRSSIPMQVQAFRRRRWRARWPWALGAVLVALLLIWLVSRSPGESTPQTSAPVSETQVAGPPWQMGN
PAGRFTLTLYADLECPFCRSYFPVLKRWVAGNADVALQWHHLPLAAHEPAASAEARLVECAGEAGGHPAF
WQAVEWVYVHTHSDGQGLPEDLRHPALTPAIEQCIASERPDAAIRTQTAEATNSGVTATPSLRLHDRETG
KAILLQGPIEGDALLSAMDMLAAGDPAATPTSEMPADVVGDMPR
>gi|319764685|ref|YP_004128622.1| DNA repair protein radc [Alicycliphilus denitrificans BC]
MSFAVNDSCLESLSAIAAQHEDWIIQQAIVLLERRVFKAGPCLSQPAAVRDYLRLKLVAEPNEIFAAVFL
DSLHQVLAYEPLFRGTINATSVYPRVVVQRVLELNAAAVVFAHQHPSGVSEPSSADRMLTQQLQAALALI
DVRVLDHIIVGQGAPFSFAESGLL
>gi|319764686|ref|YP_004128623.1| hypothetical protein Alide_4030 [Alicycliphilus denitrificans BC]
MPASSSRFASGWRTLGLAVALPASLAVFSPASFAADVVIITDSRHPVRTMGGEQLIELDEAPRIEAELSA
ALPADPGQATAIVKRRLSQGGADLQRRIATAYQGVADAWSLGITTIPAVVVDQRYVVYGEPDVARAIARI
EQHRRAEP
>gi|319764687|ref|YP_004128624.1| hypothetical protein Alide_4031 [Alicycliphilus denitrificans BC]
MIRSFDLLRRMRAAVTSVLLLSATGSYALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTSVKV
RHYIPDAVVSSYSNTGENPWVEVRAMSTPNPSAQAGGDGTTNEDHENNLAKFKNADVIGHPGVEVFNQFV
SSSGYFCEGAGTAFMPYLLSTLDTPAWRYNVPEMVYPEALIPGMREVGARSTLNLWGNVYPRGGFLHQTD
DHKAGAVVAQRAGDVVTRRGQIHVYQPLLANSRDGYWPAGALMEGDASTGKWQELTPVLSSSCTVFPRNG
FLTQAQQGDYAWALWRPYACCERRGQVFLGSVDFY
>gi|319764688|ref|YP_004128625.1| integrating conjugative element protein, pfl4711 [Alicycliphilus denitrificans BC]
MKRPELMNPSAKVRRPLRPTALAGALALVCGLAWAQAGFQTSGPVIGDEVMYSIGGGSAVSMGRAAGMRS
IGVGLGWNSNLICGDMSIQTTLRNQLNGITNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNG
VLQARLDFDRSKLTCRAMAEKMAETAGGQLGWSQMAEGMALRDAVSSTDAVSAIEQAETRRGNDGVPWVG
GSNAGGAGQSAIRVVGDVTRAGYNLVNGRSVTDTSSIAPASCASLSCQTWTSPQQATEWATRVLGEQVQR
TCDSCTKTETVPGVGLTPLIQEEYETKLEALQELVSGTRNTTFENLHAAGSTSLPITRGVIEALRDEPDQ
DLLARRLASEVALSSVLEKALLLQRTLLTGKKEPNVAANQLAVEAVNHESDTLDQEIRNLKTELELRREL
ANNSPMAIIQRHGTRAAGSRGIYEGDPVPDRLDRLQRGNPGGTP
>gi|319764689|ref|YP_004128626.1| hypothetical protein Alide_4033 [Alicycliphilus denitrificans BC]
MNAAWLRPRWLFSRRAAKALLLAVVIIAAAVGANLVGIYLVGSVAGWERWLAASAGYFLVWRLCLYGATV
YGWVWMRRRLLAREEDAQARRRLVRSEIAGVVAIVALEASLLMQS
>gi|319764690|ref|YP_004128627.1| hypothetical protein Alide_4034 [Alicycliphilus denitrificans BC]
MTLFTTDYLEYYLTLVSWIVNNGIWAVLVSSGVFALPFVAIIVQEWLKARAEGADEGNKGVLSAARIENR
VFVAIVVVMFAGIPFIDVDLNTIQYDSSRSAQCQVSVPQPTDTGWSQSFSTINNQSAKVPVWWAFMHALS
RAVTSASVAAIPCGTDLRQMRMEIDATRIDDPVLAQEVADFSRDCYGPARAKLFMQRPQLDEQQMHDVTW
IGSRFFTDTGGYYDTYRSSTPRDDWPYDSTRDAGLAQVGSGGGYPTCRQWWADGGNGLRARLLGQVDPNL
LNRLAGWAGFLSRAEVDDSVIRAIASPRQQKLNQGSVYTDYGGQIDKTLPNIVTRATGDVGMAVGAIAAF
PAMDVVRQSLPMVLALLKMALVICIPLVLVVGTYDLKTVVTVSVVQFALFFTDFWFQLARWIDSTILDAL
YGWGFGWNRPHTNFDPLVGLNNAFGDMLLMFVTGTMFIVLPTFWIMALAWAGVRAGNVLQGLAGATGDAK
AAGGRGGSIAINAVSKK
>gi|319764691|ref|YP_004128628.1| hypothetical protein Alide_4035 [Alicycliphilus denitrificans BC]
MNTTTRTSTAERLGRAFGRGWRAYARCERRASNWLVSKGMPTAGATALVWMVKLAALGVLLYTTFWLALV
MVCVMVVAWMARNTDLGEELPEPEWRNGPAGFGLYTYEGFRIDPHVEDD
>gi|319764692|ref|YP_004128629.1| res domain protein [Alicycliphilus denitrificans BC]
MSHELPSFLIDAGELLQHVSRVVYRGSPLYYGRSSTNRYDDPAQAYGVLYLGRDLPTALMESVFHKHQWL
ADTKRSIALKEVQSRMVRAVGVMDDVLLADLTAPGVMAGYFGLNLEQLASRDYTHTQQVSAQVHAMLGDD
GQVLFDGVLYPSRNNYPAKSIALFERASAKVSVIEDIDLVDHVDWPRFVATYRIGVEPDPGPLEPDDEAS
>gi|319764693|ref|YP_004128630.1| hypothetical protein Alide_4037 [Alicycliphilus denitrificans BC]
MPTAIEFIADRLPRVTVEDVRRFADTVEIRDAPAFAAELQAFIHERVEAVKLPANLEGETVEHALKRKTA
ALRAETRWAPTETDVQRGRAVLLETFNQPHNLPPAEYAKLADKSRQQIYKDILARRLLALNVGPRGQKLP
DWQLDPVKQQLTQTVLQEVEGIDPWTIYRALSEPLEGLGGRSPVDAVTHGTIDDVAEAVFNVLGVQVH
>gi|319764694|ref|YP_004128631.1| relaxase [Alicycliphilus denitrificans BC]
MLSLFQRKRPPVAGAPPPAPATVLPKGLMRPESAASLLATPRRQKLLEHIWQRTSLSRRQFATLYRAPLE
RYAELVQAFPASEAHHHAYLGGMLDHGLEIVAYSLKLRQSHLLPIGASPEDQAAQSEAWTAAVAYAALLH
DIGKIAVDLHVELADGSIWHPWHGPLRQPYRFRYRDDREYRLHSAATGLLYHQLLDREALDWLSGYPSLW
APLLYVLAGQYEHAGVLGELVVQADRASVAQELGGDPARAMAAPKHALQRKLLDGLRYLLKEQLKLNQPE
ASDGWLTDDALWLVSKTVSDKLRAHLLSQGVDGIPANNTAVFNVLQDHGMLQPAPDGKAIWRATITSSTG
WSHSFTLLRLAPALIWESGERPTPFAGTVAIDAAVAENDAEAPKMPPAAMAKAAPNGQKLPSWEGSSTVT
ASPPKAQPVSDVMEDMLAMVSTSGSPGAEQDVEPVAQRSYPADPSTPMPATAAVLPSPPPSTAKPPLTAA
PPSGEHFMMWLKQGIASRRLIINDAKALVHSVNDTAYLVSPGVFQRYVQEHPHVGTLARQDKMPDWQWVQ
KRFEKLGLHRKHDSGLNIWICEVTGPRKSRKLHGYLLIDANWLFDAVPPNNPYLRVTQEI
>gi|319764695|ref|YP_004128632.1| hypothetical protein Alide_4039 [Alicycliphilus denitrificans BC]
MGVEWKSRDAVIEEPGRRIVQEQTRTGGQALPWLDMTAFLRGAIDLALDNHANAPRSNTQWVFFDRGLID
AAAAPQALDGTTILDTIAQSHRYHSRIFLAPPWPEIYVQDEERRHSMDEARAEFERLQRTYPALGYAVSR
LPKIRVAQRADFVLDTLASR
>gi|319764696|ref|YP_004128633.1| hypothetical protein Alide_4042 [Alicycliphilus denitrificans BC]
MRFPQACLLITCAALAPLLLGGCSILREFGPVVEVHTLPTREAIELKRGDILTRGKLSDATVQTIRVAAL
DEQACAKPISSECAEALATVTGVATDRRLAALSELWLAQAQAMKPGSAQQAAWLETIRYAYAYLFLGDHT
PGERAFEDRQTQVRDWYNYAVEHAATGMFEVRQQMPTQLPDQTSWNIAGWELKLDMRGARLPGSTAVPAE
LLPASSLSFRGLRSLYRRDGFGAELVAVIPDESLSAAPTRGGRPAAKHDQQPLPWSEMPAPSMTVLLHPD
GDNLDSVLHARTARLTVHDPYVESAIMLRGQRVPLAANFTAGYGVWLARANFNRQSLRSLLGREGGIDRP
HVYLMQPYDPNRRIIVMLHGLASSPEAWVELANEILGDEALRQHYQIWQVYYPTNMPIALNHAMIRRALG
DTLAHFDPSGQAPASSDLVLVGHSMGGVIARLMVSSTDQSLVQLAADRSRLTPQQIKRIDPMLRFEPFPN
VSSAIFIAAPHRGTSVAGGRLGRWMAGFIRFPITVLEELAHTLAPNAAASSRESLATIPNSVNNLDENDP
FVRTAAGFPISSQVRYHSIVAQANSEVALDDSDDGLVPYRSAHLPGAQSEKVIISGHSVQQSAAAILEIQ
RILREDMALREAHLQP
>gi|319764697|ref|YP_004128634.1| hypothetical protein Alide_4043 [Alicycliphilus denitrificans BC]
MHIVLRALAGLAIGFVVLLLTVWGALALWHQMPGPSVVRWFVIAMWSTLGVTVVLSRAGLLGRRNRNIAG
FAFVIAAASLLMWWGTLQPSHQRVWADDVAQLLEARIDGNHVHLNNVRNFQWRSETDYTPQWESRTYDLD
RLRSADLVLSYWMGPHIAHTLVSFGFDGGDRVVFSLEIRKERHESFSAVGGFFRQFEQILVAADERDIVR
TRSNARGEDVYLYRLQMNQASARALFLEFLNAANELRQKPRFYNTLTSNCTTIVFELARVIAPALPMDYR
LLLSGYFARYVYDMHGLTPGYRYDELQALGHINERALASDVSEDDFSMSIRQGVPGIPANEVNP
>gi|319764698|ref|YP_004128635.1| integrase catalytic region protein [Alicycliphilus denitrificans BC]
MIDVATLSVIRRWALREQLSIREIARRTGLSRNTIRKYLRAGEAEPHYAKRVSPSKLDPFALKLSGWLKT
EAGRSRKQRRTVKQIYADLQALGYTGSYNRVAAFVRLWQEQRLVAQQTTGRGTFVPLAFGPGEAFQFDWS
EDWAVLAGVRTKLQVAHFKLSHSRAFYLRAYLLQTHEMLFDAHNHAFVVLGGVPRRGIYDNMRTAIDRVR
RGKERDVNARFAAMVSHFLFEAEFCNPASGWEKGQVEKNVRDARHRLWQVVPPFPSLPDLNAWLEERCVA
LWHEIEHGKLAGTVADVWAEERAALMPVPRPFDGFVEHTKRVSPTCLVHFERNRYSVPAPYANRPVSLRV
YADRLVVAAEGQIICEHQRLIERNHHGAGQTVYDWRHYLAVLQRKPGALRNGAPFQELPVAFKRLQTALL
MQPGGDREMVEVLALVLHHDEQAVLAAVELALESGAASKTHILNVLHRLLDGKPAPAPVTSPQALKLAME
PQANVLRYDQLREVRYAS
>gi|319764699|ref|YP_004128636.1| istb domain protein ATP-binding protein [Alicycliphilus denitrificans BC]
MRHDPAIASIVIMLRELKMHGMAQAVAELAEQGAPAFEAAQPILSQLLKAETAEREVRSVAYQLKVARFP
AYRDLAGFDFSHSEVNEALVRQLHRCEFLEDANNVVLVGGPGTGKTHIATALGVQAIEHHHRRVRFFSTV
ELVNALEEEKAQGKTGQMAHRLAYVDLVILDELGYLPFSASGGALLFHLLSKLYERTSVVITTNLSFSEW
ASVFGDAKMTTALLDRLTHHCHILETGNDSYRFKNSSAQQPPQTTKKEKATKNLSTT
>gi|319764700|ref|YP_004128637.1| hypothetical protein Alide_4046 [Alicycliphilus denitrificans BC]
MFDEAGFQFRISFLRHQFAQNITPFVADQQIGQGMSLPFMLTSLGRVIESHGMTDFLFGVADQMLVEMTE
>gi|319764701|ref|YP_004128638.1| hypothetical protein Alide_4047 [Alicycliphilus denitrificans BC]
MDTLTLGPGAALVARDFSPRDADDVPVARNVAEHAVAYLFEPVALLPGLKLGDIFRLFEACPELHAVFRR
NWSFAVCEEARKGPVPRPRHDHPAEDAGIEYLELYWSWALDTGSKVYRGVHRLDLHGVGPVLEADCPTYD
VKAGDRIRWALSLTPVRELLDLPLRLCEELTIVEDDLDSKGWRETVATGRCAEVLLGQVIQGVLDELCFH
GGPQEKEEASDGLKAQLAEMEAGTMRTTPADDLFEELDRPGFVALFETLGGIRPAEVSRAIRAIEDDEPV
GPALERAFDGEVVVKMQFRSRPGREFRKLFRAAGR
>gi|319764702|ref|YP_004128639.1| res domain protein [Alicycliphilus denitrificans BC]
MIPVAILGEGKAEAFYRIISPAYAGMPLSGMGAARQGGRFNRPGQEALYLAMDEATALAEYKQDNPWLRP
GTICTFFVKGLRVADFSAGFDPQKWPPLWADFAVDWRAEWFGKSVEPPTWYMSEDVIAEGLDGILFPSQA
RPDGINLVVYRSSARPADQLRVYDPDGVLPKIAPFAGHPWTP
>gi|319764703|ref|YP_004128640.1| hypothetical protein Alide_4049 [Alicycliphilus denitrificans BC]
MSAVLQQPFVEQFREPGTPYLSPVLLGDFLGFQVQELAERAHVHRNTPTARPQAPQLQKYLQDMVRVLAV
ATEMTGDEKRAAFLVRNEPLRAFGYKTADALVQEGRVDAVIAYLESLAGGAAG
>gi|319764704|ref|YP_004128641.1| chorismate mutase, type ii [Alicycliphilus denitrificans BC]
MSRAIDKVRHCTTLAEVRDGVNALDDLLVPLLVERGGYMTQAARVKNDEGLVRDEARIQAIIDRVRPMAE
AQGGDPDLMERLYRAMMECYIAYEHDELARLRAKGLQPK
>gi|319764705|ref|YP_004128642.1| anthranilate synthase component i [Alicycliphilus denitrificans BC]
MITELEFKSLALEGYNRIPLIAEAFADLETPLSLYLKLAHGKGDGTNSFLLESVVGGERFGRYSFIGLPA
RTLLRASGFGDAAKTEVVTDGQVVETAAGNPLDFIADYQKRFKVALRPGLPRFCGGLAGYFGYDAVRYIE
KKLESTCPPDTLGCPDILLLQCEELAVIDNLSGKLYLIVYANPAEPEAYAKGKKRLRDLKDQLKYSVSAP
VVRPSESHPAQRSFAKTDYLAAVARAKELIAAGDFMQVQVGQRIHKRYTESPLSLYRALRSLNPSPYMYY
YHFGDFQVVGASPEILVRQEATPEGQKITIRPLAGTRPRGATPEADKAIEQELVNDPKERAEHVMLIDLA
RNDIGRIAKTGTVKVTEAFAIERYSHVMHIVSNVEGILNDGMTSMDVLRATFPAGTLTGAPKVHAMELID
QLEPTKRGLYGGACGYLSYAGNMDVAIAIRTAIVKDGTLYVQAAAGVVADSVPELEWRETEHKARALLRA
AELVEEGLE
>gi|319764706|ref|YP_004128643.1| chemotaxis sensory transducer [Alicycliphilus denitrificans BC]
MQLSNIKVGTRLALSFGLVLFITALIAGIGIWRLQALAATTQQLTSTDNERLKAAQQWRQGIYQNWIRTR
AALLDSGTSHLASWQAEMDQTSKDVDVSRKVVERLLQSDEGRELLADIDKAREAYRSPRADLFKRKAAGE
DVGPQVDSQLKPLSDAYIRALLALEERQQALYEHTREQAVAEASQGRAILLAATALALLMGAGAAFVLSR
SITVPLQQAVRRAGQIAEGDLTQPIEAQGRDEAAALLNALRHMQANLARVVSDVRANAESVATASAQIAQ
GNGDLSARTESQASALQETAASMEQLGATVRQNADNAAQANQLAMSASTVAAQGGEVVSEVVDTMRGIND
ASRKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAEAAKEIKQLITASVE
RVEQGTQLVDKAGETMTEVVGAIRRVTDIVGEISAASSEQSSGVAQVGEAITQMDQATQRNAALVEESAA
AASSLKAQAAQLVQAVAVFKLAGHAGAAIPHAVKAPPPAPVAAPPVPRSEPRPGAPARPPARTTAQPPQA
PQAPKTSKAPAAALATQGGDDDWESF
>gi|319764707|ref|YP_004128644.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MLLVSLLALGNVLTMQLLLRQSDNLAATMNLAGKMRMLGQRIALEALAEQRHPDDSWPTPRERYATFEST
YAALRDGGSAYGLEVQPLDARLQPTLQALHEGWLRYRLAIDALLLAPPMANAEVMSVMAASEHLLARTEA
LMDRLVQFADDAHQRALMSSLALFALDALLLLLSYALLSRRVLRPIHVLTRQCREMALGRYGTRTRLSTS
DELGELARVLDHSAAHIAQLLQDVAQERSALAQMQAMFNGLAENTVAGIYMLDESDRIIYANEQLAQILG
YGRAQLSDRFPMERLFPPPARAAAHQHSARHERSALRADGSKIEIEIFGSAMTFQGRPAVIGLVMDITER
KRAEMSARRAALVYQHTSEAMVVTDAQGVVQDINPAFTAITGYEAADILGRRMNVLSSGGQDRAFYEALW
TSLKETGSWSGDMRNRRKNGEEFVERLTISTSYNEDGSVHSHIGLFADVTEARRREASIWRQAHYDHLTQ
LPNRQMFQQDLQRSMDSARASDLPLALVFLDLDYFKEVNDTFGHDMGDELLRQVARRLQSCVRSSDQVAR
LGGDEFTLILRDLKRLEDAPAICRKVLHAVAQPYELSGSTVHVSVSAGVTFYPRDGDDGVTLLKHADLAM
YAAKEQGRNQFCEFAPTMEQEAQNRRLLLRDLQQGLDEGEFALHYQPIVEMRSGRTVKAEALLRWNQPVR
GMVSPADFIALAEESGLIVPLGDWVMREAACQLAQWREDIAPAFKLSVNVSPVQLNSSGHCVQAWVAHLQ
DLSLPGSALVAEITERVLLEADKDTDARLQTLQSAGIQLALDDFGTGYSSLSYLKRFDIDYIKIDRSFVS
LLSQGNEDATLCQAIIAMAHQLGICVVAEGVETREQHDILLRAGCDYGQGYWYGRPMPAQELTERLRAQH
RAPQPALAERG
>gi|319764708|ref|YP_004128645.1| phosphoglycolate phosphatase [Alicycliphilus denitrificans BC]
MQDKDFSMVTEQDRLAALLARTDAAIVDLDGTMVDTLGDFAEALNRMLRDLQLPTIAPAQIARMVGKGSE
HLLRSVLKQVLTPDGQALEAIEIEATVEALYPRAWERYEHHYLTINGQFATLYPGVAEGLQALRGAGLAL
ACLTNKPTAFARPLLRAKGLEGFFDHVFGGDAFARKKPDPLPLQKTCEALGTAPAHTLMVGDSSNDAQAA
RAAGCPVVLVTYGYNHGQPVQAVDADGFIHALPELAAARGAGRAAAR
>gi|319764709|ref|YP_004128646.1| hypothetical protein Alide_4055 [Alicycliphilus denitrificans BC]
MHIHRFTLLAPAAALLCAAAAQAATSVHDQYRADRAACAGEPADSRAACIREAGAAAQAARQGGLSSANA
STYENNALARCDVFKAPEDKSDCIARMGNKATVQGSVDGGGLLRESVRTYTVEP
>gi|319764710|ref|YP_004128647.1| ribulose-phosphate 3-epimerase [Alicycliphilus denitrificans BC]
MSRTYRIAPSILSADFARLGEEVRSVIAAGADWIHFDVMDNHYVPNLTFGPMVCQALKPHAVTPGGQSVP
IDVHLMVQPVDALAEAFAQAGADLISFHPDASAHVHRSIQAIKARGCKAGLTFNPAMPLDVLDWVIEDID
LILLMSVNPGFGGQGFIDSTLRKIEAARKRIEASGKDIRLEVDGGIKTDNIRRVADAGADTFVAGSAIFG
KPDYKAVIDAMRAALA
>gi|319764711|ref|YP_004128648.1| apag domain protein [Alicycliphilus denitrificans BC]
MPKYQFQAEVQPRYLPEQSSPGDGVYGFAYTITITNTGDISAQLISRHWTICDANGHVQEVKGLGVVGQQ
PLLRPGESFEYTSGCRLRTSSGSMHGSYFCVAEDGEPFTCPVALFVLEAMSPQSPGEPFSSRVLH
>gi|319764712|ref|YP_004128649.1| site-specific recombinase gcr [Alicycliphilus denitrificans BC]
MSRKTPDLARLLAAIDPTAPLAQRHLQLIALLGWVRGDGSAVEAATGRVALLVEAAERAPDVRARLQAWW
ATLTQHLDITTLLADFGFAQRTSMASELAERMRYKLLPANPDTVDASELFMLALPHEFDARWLAALDEAL
LVRLLAVLLPARDEDDGGANHWQRALLDAIAYCAGQILATGFAPELRLRMSEAAREEQPFHALLRDAESL
RVEVLHPLRTQDRLQQAVQGLRERLDACRAAVNTVYAHFEDNGISVGLVFRLRQLRERILRVRELLECLL
SPRPAVAAAQLMSHLVTVGRVRRSVRALVATNSSLLAAKVAERSAETGEHYITRTGGEYLAMVRQAAGGG
LVMAFTTLIKFGLYALALSAFWGGFMAGVNYAASFVLIQLLHFTVATKQPAMTAPAMAAKLKDLGEDASV
ESFVDEVAHLVRSQAAAVLGNVLLVFPGALALALLIAQALGRPAIDAQHAVHTLDALHLLGPSLLFAAFT
GVLLFASSILAGWVENWFVLHRLDSAIRYNPRITATLGRRRAERWARFLRGNISGLAANISLGFMLGLAP
AFAAFFGLGLEVRHVTLTTGQIGVAAATLGLDALHLPAFWWAVALVPFNGALNVIVSFYLAFRLALRAHN
VGRVDRKRIYRALRRRWRSAPLGFFLPPRRSI
>gi|319764713|ref|YP_004128650.1| sodium/hydrogen exchanger [Alicycliphilus denitrificans BC]
MNELMSFWAQWLRPSAGLPTVQWALLLAVATVAGYLVQRHSGLPKVVGYSLVGTIVGLAGFEGAVWPLQG
IGLFLVELAVAVVLFEAGGRIPLRWFRHNPMVLVQSIAESVLTYFSVYWVMLWLDVPAHAAGPLAIVALA
ASPAVLTRVVSDTRAAGPVTERAIVLATLSSLYALALGSAQAGLIQRPATGLLGQVYPVLVVLGVSIAVG
ALLSLLMRLALRVMSPTSENTAILLLALIAASTAVTAHMGGSAPLAALLGGMLLKQLHPRPWAWPRQMGT
ASSLLTMLMFVLVSTVAAQGEWSAPVATSVLALILVRLLAKAVGVGLGNVGSGASWRQALWVGCAMTPMS
AIALLVASQFVVASSATGELIARIALPAILVMEVLGAVIATYAIYRAGESARPWMPQSERGGNTGESSRE
S
>gi|319764714|ref|YP_004128651.1| glutamate--cysteine ligase gcs2 [Alicycliphilus denitrificans BC]
MSLEAFHHSEPLTLGVELELQLVNTHDYDLAPYAEDMLRLMHKTPLPGSVVPEMTSSMIEISTGVCHSSS
EVLGQLTQIRDALVKSADKLNIAVVGGGTHPFQQWHERRIYDKPRFQELSQLYGYLSKQFTIFGQHVHIG
CPDADAALLMLHRMSRYIPHCIALSASSPYVQGQDTAFDSARLNSVFAFPLSGRAPCVLTWSEFEQYFEK
MTHTGVVKSMKDFYWDIRPKPEYGTIEIRVFDTPLTIERAAALAGFVQSLAAWFLAEQPFTPQEDDYLVY
TYNRFQACRFGLDAVYVDPATGAHMPLREHILQTLDHIARHASSHGASGALHILRGETALGQNDARWLRE
RQREEQLLAEVSRQAALRFRGQPL
>gi|319764715|ref|YP_004128652.1| thiamine-monophosphate kinase [Alicycliphilus denitrificans BC]
MGEFDLIARYFTRPVRPGGGVALGVGDDCALLAPAPGMQLAVSCDMLVEGRHFFADVDPAHLGHKALAVN
LSDLAACGARPLAFTLALALPRVDEPWLEAFAGGLLRLADAHGCALVGGDTTAGPLNICITVFGEVPAGQ
ALLRSGARAGDDIWVSGTLGDARLALEALQGRIQVPPGMLAAARARLETPTPRVALGLQLRGIATSALDV
SDGLLGDLGHILRASGVGAEIDADEVSKLIAASASSTGDRGHLDTELLRQCTLAGGDDYELTFTAPPARR
EAVARAAASAATPVARIGRISAEPGLRLVDAQGRALAERYASFDHFA
>gi|319764716|ref|YP_004128653.1| regulatory protein tetr [Alicycliphilus denitrificans BC]
MQQPIQPSCAASDPPARRRLAPQVRVAQILDAALVEFSERGFAATTMDDIGRRCGLSKGGLYAHFASKDV
IFEALLHRSLAPPEWQEPPVPPVEAGTRAFAQWLVGRLYAGLLERPAVVATLRLLAAERGRVKDLVELWE
HNVVRPNMALLADMLRVHAAQLGLPPSVIVREPWLVMAPVMHALLAQMILGHEPAMGLDCLRSSHVELLC
ELLDPRERIAGAAPAVQAK
>gi|319764717|ref|YP_004128654.1| poly-beta-hydroxybutyrate polymerase domain protein [Alicycliphilus denitrificans BC]
MPDTFSATALADQLDTQFHAALARRFFSLSPAAGLLAASDWALHLAVSPGKCMDLARLALRQSEELAGYA
RERMTAGADPQMRHGVQPPAQDRRFAAPEWQQWPFNYMHQSFLLTQQWWAAATHGVKGVEKHHENVVAFA
ARQLLDVFSPGNQLATNPVVLQRTLQQGGANLLRGALNAADDLQRLAAGKPPAGTEDFVVGRDVAVTPGK
VVLRNRLVELIQYAPTTEAVRPEPILIVPAWIMKYYILDLSPHNSLIRYLVDQGHTVFCLSWKNPGYEDR
DLGMDDYLKLGFHAALDAVNAIVPKRKVHATGYCLGGTLLAIAAAAMARDGDARLASLSLFAAQTDFSEP
GELGLFIDESQVNLLEAQMTQTGYLKASQMAGAFQMLRSYDLLWSRLVNEYLLGERTPMNDLMAWNADAT
RMPARMHAQYLRRLFLDDDLSRGRYPAGGKPVALSDLTLPTFMVGTLTDHVAPWRSVHKLHYLTTAEITF
ALTNGGHNAGIVNPPGHPRRHHQILTRPAGGSYMAPDDWLAAAADVPGSWWPAWVQWLQARSGAPVAPPH
VGARGYKAIADAPGSYVLEK
>gi|319764718|ref|YP_004128655.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC]
MNITESTVLPRPRGLRLACAAAAAVLLLAGCTTLAPPYEAPAMPVPQRYAGAAEPGGAVAAATAWRDYFT
DPQLQALIVQALEHNRDLRTAALRVQEARAAYGIQSAELSPAVGAQANMDRARTPADLSLTGRPMVASQY
QVGLGMASWEIDFWGRVQSLRDAALENYLASDAARHAVTVSLIAQVAGGYLALRELDERLTLAEQSSASR
EESLRISRRRVEVGSDSRLHLTQMQTLLTQAQALVAQLSLERARQAHALGQLVGSGVALAPAAGRLAEQQ
MPRLAAGLPSDLLAQRPDIVAAEHQLRAAHAQIGAARAAFFPSISLTGAFGTASAELGGLFEGGSRAWTF
SPSITLPIFSGGRLKGNLALAEVRRDLAVANYEKTVQQAFRDVSDALAGRQWLERQSRIAQEALAVQTER
ARLSQLRYDHGAAAFLDVLDAQRDLLVAQQQTVQAQRLLLSSQVSLYAALGGGALTQTHTPIEPRRSDTP
>gi|319764719|ref|YP_004128656.1| secretion protein hlyd family protein [Alicycliphilus denitrificans BC]
MKPQLKNRLTLLAIVAAALAAGAYAWTQLRATGPGENFASGNGRIEATEVDVATKLGGRVQDILAQEGDF
VDAGQLLARMQIDTLEAVHAEARARLQQSVAALASAQAQVAVRESDKQAAQAVLAQRQSELEAAQRRLAR
SQTLVREGAASDQEVDDDRARERSSQAAVVAARAQVNAAQAAIDAARTQATGARATVAAAEATVARAKAD
IDDSALTAPRSGRVQYRLAQPGEVLGGGGKVLNLVDLSDVYMTFFLPETVAGRVALGSDVRIVLDAAPQY
TIPAKVSFVASTAQFTPKTVETASERQKLMFRIKAQIDPQLLQKHLRQVKTGLPGVAWVKLDAETPWPEN
LQTRLPE
>gi|319764720|ref|YP_004128657.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MAAETPQPVVRLQAVRLRYGKTLALGGVDLDIPAGRMVGLIGPDGVGKSSLLALVAGARAVQEGSVHALG
GDMAGKRHRDAVCPRIAYMPQGLGKNLYPTLSVEENLQFFARLFGHDAAERRRRIDDLTRSTGLAPFLAR
PAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWELIARIRQQRPQMSVIVATAYMDEAQ
GFDWLVVMDEGRVLATGTPAELLARTGSESLEGAFIALLPEEKKRGYAPVEIPPLPDDGGDDIAIEARGL
TMRFGDFTAVDDVSLRIRRGEIFGFLGSNGCGKSTTMKMLTGLLEASAGQAWLFGQPVDPRNIATRRRVG
YMSQAFSLYGELTVQQNLVLHAHLFHVPEAEVEERVDDMVRRFGLADVRGSLPESLPLGMRQRLSLAVAM
VHRPELLILDEPTSGVDPVARDHFWRLLIELSRRDKVTIFISTHFMNEAERCDRMSMMHAGKVLDSDAPA
RLVAKRGAHSLEEAFIGYLVEAAGGAGQAAAGTAPAAAPAGAPASAAPARPSRFSLQRLLSYMWREALEL
QRDPVRATLALAGSLILMFIMGFGISLDVENLRYAVLDRDQSTLSQNYTLNLAGSRYFIEQPPIVDDADM
EHRLRSGELALAIEIPPGFGRSAMRGSPVAVGAWIDGAMPTRAETVRGYVQGIHQQWLQEQAHARGMSTP
AAVSIETRFRYNPDVRSMPAMMPAVIPLLLMMLPAMLTALAVVREKEMGSIINLYVTPVTRTEFLLGKQL
PYVALAMLNFLLMVLLAVTAFGVPMTGSFFALALAAFIFSLASTGMGLLASAVTRSQIAAMFFAMIGTLI
PATQFAGLTDPVSSLQGVGRFIGDIYPATYMFTISRGVFNKALYMADLHAQFWPLLLSVPVILGVAIALL
KKQDT
>gi|319764721|ref|YP_004128658.1| abc-2 type transporter [Alicycliphilus denitrificans BC]
MPTPRHLANIYRLGIKELWSLLRDPVMLVLIVYTFTVSVYTAATAMPETLNKAAIAVVDEDSSALSARIV
SAFYPPQFVTPVLITPQEMDAGMDAGRYTFVLHIPSGLQRDVLRGRAAALQLNVDATRMSQAFSGSGYVQ
QIVQGEISEFTQRHRASAALPVDMALRARFNPALEKSWFGSLMQIINNVTMLSIILTGAALIREREHGTI
EHLLVMPVTPAEIMLAKVWSMGAVVLLAAALALQFVVRGLLHVPIEGSVPLFLAGSALCLFATTSMGIYL
ATLARSMPQFGLLMILTLLPLQMLSGGMTPRESMPQIVQTLMLFAPTTHFVELAQAILYRGAGLDVVWPQ
FLALLAIGAVLFGLSLARFRKTISQMA
>gi|319764722|ref|YP_004128659.1| phosphate acetyltransferase [Alicycliphilus denitrificans BC]
MPDTAPFTTAAMPGDELAIVRNRTFDEIAIGDSASIERTLGNQDIQLFALLSGDVNPQHLDEDFAAATHF
QGVIAHGMLGGALISAVLGTRLPGPGTIYLGQTLKFLAPVRVGDRLRIGVTVTARDETRKRLTLACACVN
QDGTTVISGEAEVQAPTERVERPRTTLPEVRMRVGQDGMQRLLSHVRPLGTLRMAVVHPCDALSLSGALD
AREAGLIDPVLVAPRARLLAVAQQAGLDLAGIAIEDVPHSHAAAARAVELVLEGRVQALMKGSLHTDELM
AAVVAAQGGLRTKRRVSHCFVMQTPAYPRPFIITDAAINIAPTLEHKADIVRNAIDLAHAIGVAEPRVAI
LAAVETVTASMPATLDAAALCKMADRGQITGGLLDGPLAFDNAVSIAAARTKGIVSEVAGRADILVVPDL
ESGNMLAKQLEYLGDAASAGIVLGARVPIVLTSRADSREARLASCAVAVLLAHHYQEAPL
>gi|319764723|ref|YP_004128660.1| acetate kinase [Alicycliphilus denitrificans BC]
MSDLVLVLNCGSSSIKFALFDAGARPLPRRPLWNGKVDGITGPAPTFGETGVAPGPVALDAAHPYSAALE
HIRARVRERMARDGHRIAAVAHRVVHGGAKYQDPVRVDAAVLDDLRGYIPLAPLHQPFALEAIAALLQGM
PELPQVACFDTAFHHTLPEVEKMLPLSWDAWERGLRRYGFHGLSYEYMSLALAERYGDAARGRTIVAHLG
SGASLCAMRGLQSVGTSMGFSALDGLMMGTRCGALDPGAVLYLMEIEQLSLQDVGRLLYHGSGLLGISGV
SSDPRVLLAQEAGDARVQAALALYVRRIVREIGALVAVLGGLDMLVFTAGIGEHNAAVRERVCAGLAYLG
VALDAQANAGNADLISSLGSRIPVAVERTNEEWVAAWHATRLLDAP
>gi|319764724|ref|YP_004128661.1| phosphatidylglycerophosphatase a [Alicycliphilus denitrificans BC]
MPSLSDIPPPRRPSVHFLLAHPAHFLALGFGSGLSPVAPGTVGTLWGWLAFLALQPWLTPLGMGLAIALA
LALGWWACAVTARHMGVADPGSIVWDEVVAIWIVLWLAMPMGFWGQLAAFALFRYFDAAKPGPVAWADRL
FKGFGWRGGLGILLDDLVAAFCTLLAIALWRHFIG
>gi|319764725|ref|YP_004128662.1| cina domain protein [Alicycliphilus denitrificans BC]
MELSKDELPALDGQALEADLAHISSILLARGWMLATAESCTGGMIAAACTDLAGSSQWFERGFVTYSNAA
KVQCLGVPAALIDQDGAVSESVARAMAQGAVRHSAAQVAVAVTGIAGPTGGTPGKPVGTVWFGWHVDGAT
HGEMRRFDGDRAAVRCATVRHALGRLRALLGA
>gi|319764726|ref|YP_004128663.1| chemotaxis sensory transducer [Alicycliphilus denitrificans BC]
MNRFKISTRVSLLAGVLSLLILGIGLLGQWGVAQANADMRVLYEERLAATARMGQIQALLLRNRLALAAA
LVTPVPGQMRASADEVDANIVAITRVWDEYLADHREGLAGEEQRLAQDFAQHRQRFVQQGLRPAVEALRA
QQPQRAQEIVLEAVRPLYEPVGAGIDALVRFQREQARMAYEAADARYAAIRALSLGAIGGGLLFALLFGV
TLVRGITGSLARAVEAAQSVARGDLGCPIEVRGRDEAAQVLQALAAMREQLAQVVRGIRSGSESVANAAV
QIAAGNQDLAERTTAQAGALEEQASAMEQLTASVEHSAANASEAQKIVARASDTATQGGEMMSQVVRTMD
DIHSSAGKMSDIIGLIDGIAFQTNILALNAAVEAARAGSQGRGFAVVASEVRALAGRSAEAAREIKQLID
ESVGRAADGAAVVNRAGATIQEAVDAISRAAPLMLEISNSSAEQSVGMAQIGMAVQHMDESTQRNAALVE
EMSAAAEGLRTQAQAQVQAISVFRLEEEPHALDHARPAWEPAPGRPAMPALQAR
>gi|319764727|ref|YP_004128664.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MMAAAGWRRGPRAIRRLCRAAGLQGLLSRLRIGTRLAVMMVLAVMVAGLLAAAGIRGLAASKESLRVVYE
DRMAPVRTLSQIAQLMLANQLYLQLALAPAAASAAAALDPVSARQAALQVERNARAIDQLWTDYLSVPRD
GDEMALAQRFGRHRARYLDEALMPAAAALRALDYRDTRRLAESARVLYEQAYPEIEGLVRLQFDFAEAAY
REGVRRYEYTRWLALGALLASMAVLSWLGLLLIRSIAEPLREVIAVCDRIAGGQLDTSIAVQGSDEISNV
FRALRSMQARLRKSEQAIHKLAYYDALTELPNRALLRERMQQALDGDGDGSACHGALLLVDLDHFKVIND
TLGHEEGDKHLCQIARRLTDAVAGRGLVARLGGDEFVVLAQHLHAGEARAQAQARELAEQVLAAITSPIH
LAGRPMHTSASLGVCLFRPGASSTKELLKRADTAMYQAKSVGRNGYRFFDPVLQSQLEARAALETALHGA
IGAGQLALHYQVQVDAQRQPVGVEALLRWRHPLHGQVPPAQFIPIAEDSDLILTLGEWVLQTACAQLRAW
AGQPHTRALTVSVNVSARQFAQPGFVEQVHAALARTGAKAGLLVLELTESVMLHDIADAVRKMQALRCLG
VRFALDDFGTGYSCLSQLQRLPLHQLKIDRSFIQDMGARASDAVIVQTIVGMARTLGLHVVAEGVETEAQ
RTVLAQLQCPAFQGYLFGVPQPAAALEAWLLGQHGGSPAPAASLISQR
>gi|319764728|ref|YP_004128665.1| response regulator receiver [Alicycliphilus denitrificans BC]
MTGSGDAHGSASLLLVDDDRLILGTLAAGLRHMGYRVAVADSVEQAEALLGGGLHPDLAIVDVRLPGRDG
LSLAQRLAEVDHVPFLMLSAYSDSGIVERATHSGALGYLVKPLALNQIQPAIETALQRAGELEGLRRMSA
QLQAALDADREINVATGITMVQYRMARRPAFELLRNAARAQRRKLSAVAQEIVRACELLHR
>gi|319764729|ref|YP_004128666.1| pas sensor protein [Alicycliphilus denitrificans BC]
MQAAGPRDADGWPVRWLHRWDRAVPGMVLTAPPPQWAWHRGVAWHRVAEGVLVYALALAAGQVIFLGWGG
EQWRPLAHAYWQFLFVAWAGMRLGLAGTAGLLCLVAVQAGWGTLQRQGFFAQDLQASGGLGYGAYMVILS
IVGMALACYLDVLRRQRADVRIAAIAFECQEGLLITDARGVILRANRSFLAMSGYAAHEVLGRTPHFLRA
ARSAQQEASDGPPPWPARQRQEWHRRKSGERYPVWFTCTPAMDSRGVVTHHVLTLTDISDWRRQKAQRRQ
REQAHRAALVREVHHRIKNNLQGVTGLLQTLGQRHPVLRDPITEVTGQVQSIAVLHGLQGRSRTDQVRLC
ELVQEVAAGVGALWGVAIAVQLPEDAGTGGLSCRIQPADAVPLALIVHELLLNAVKHGGRQYQDVQVTLN
AREEPQQSCLVISNPGQWPESSSDAQVGLELVATLMPRLGASLALEQAGERAVARLCLQAPVLLPGWADA
APESGRLAHEGAAA
>gi|319764730|ref|YP_004128667.1| sec-c motif domain protein [Alicycliphilus denitrificans BC]
MTESSASASPALGPDELDELDALLDELRTREEDVPQWEFCDGFLTALACTRRPVPAAEWLPMLLGDGLPL
QAPEGEPLPLVPTFRDLAQQQRFLALWELRSAEVAAQLDAQAESLDADDAFQPEVIDMRGAIASLPEEER
AEMEGQETPSFGQVWALGFMFAVENWPDDWAAPRDKEAAQWLDDALDAIVALTEDDTGRPEICMYDEDGP
PSTSQERLEVFGEAIWAVYDLRQLWRSLGPRVETIVKGAQPGRNDPCPCGSGKKYKKCCGA
>gi|319764731|ref|YP_004128668.1| hypothetical protein Alide_4077 [Alicycliphilus denitrificans BC]
MRPELSLPRHAPAGGPACPVVLDTNIVLDLFLFADPAVAAVRALLQARRLEWIATRPMRDELERVLQYPH
LQPRMQYYGVAAQDVLAAFDAGTRAVEVAARAPCACKDADDQKFIDLALAHRAILVSKDKAVLCMRKRLL
ALGVQVVTAIVLVEGAVPCSA
>gi|319764732|ref|YP_004128669.1| rRNA (guanine-n(2)-)-methyltransferase [Alicycliphilus denitrificans BC]
MNTLQLFLPCAAGVEGFLADEVHGLTGLAGQDLLVGRAGVLVRAAWRDALLLNLHSRLAQRVLVQLAERP
YRSENDIYALAGDVAWEAWFTPRQSFKVEVTAQHSPLKSLNFAALRVKDAVADRFRAKGGSRPDVETRWP
DVRIHLHLTREHAQLYIDTSGEPLFKRGWREDKGDAPLKETLAAAMIAATGWDPHGDQPLPLYDPCCGSG
TVVIEAAQIACRIAPGLRRRFGFEKLLPYQAHVWSAIKEEAAGAVVTSPVPIFGSDVSHRMVDFAQRNAE
RAGVTGAVQLRGGDALQRMPPCEQPGVMLLNPPYGERIAAAGSAGRSARERMAVVARAGRESAQTEDGVD
FFQQLAAHWKRHYAGWQAWLLTPDLKLPGKMRLKESRRVPLWNGPIECRMFRFDLVAGPARPRTPAGTTD
AA
>gi|319764733|ref|YP_004128670.1| chemotaxis sensory transducer [Alicycliphilus denitrificans BC]
MFQSLRARLIGVSIAVATLSLLGLSLVAYVVVRSNMLQALDERIGGLTRQHAAELGQWIADKQQLTGSLL
IAVREEQPLPFLQAAEKAGLDLAYFVMADKRHAFTKPRPAGYDGTARGWYKQAVAAGGPAITPVYPDSAT
GQLTVSLVQPVIEGGRTVAVVGSDINLTTVVKKVTGIRATGKSFAFLIDGTTGNILAHANQALALKPVKE
LAPGLDSALFTRLAGQQGHGEVTIDGKPQLLYAARVEGTPWMLAVAADRADALSALDRLGHVAMLSTVLF
VLAAGLVMAVAVARMLRRLALVRDALQGIASGEGDLTRRMDVSGRDELSQIAQAFNQFADKIAAVLLRMR
EAAESVRIASGEIATGNNDLSARTEQQAGSLEETAAAMEQITATVQQNAANARQADTLAQDASQVASQGG
AVVEQVVQTMDGINSASQKIEDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRQLAQRSA
TAAKEIKALIDDSVQQVDAGSRLVRDAGETMRKVEHSIRRVSAIVAEISSASQEQSTGIAEIGSAVSQMD
QGTQQNAALVEQATAAAQSLRQQSQDLAQLVAAFRLPQGAAAQRLLA
>gi|319764734|ref|YP_004128671.1| hypothetical protein Alide_4080 [Alicycliphilus denitrificans BC]
MARIVFDLPAHFGFSTELQVYISHVNQGGHLDNAQLLSLVSEARVRFFKSLGYTEADVAGLSTVVGDMLA
QYKSEAFHGETLRVQMTPQDFNRYGFDLVFRMTEKSQGREVARGKTGIVFIDRAARRPAPIPEPVRQLLL
VAGSALS
>gi|319764735|ref|YP_004128672.1| RNA polymerase sigma-54 factor, rpon [Alicycliphilus denitrificans BC]
MKPSLSLRVSQHLALTPQLQQSIRLLQLSTLELAQEVEQMLDENPFLERTVDDASLDEPVAPPSDEGGRR
AEDATPSGAADADWTGDEGQNDAQMPDIAAPTDWDGDTDIPGDDREWGSDAPASAGSGSGDGDEADAADL
AHGHESLADHLERQALALRLSELDMAALRFLIGSLNDDGYLDEPLESLAASLADTDDPEQLDELVHRLTV
ALRLLQSLDPAGVGARGLAECLALQLQALDREEEGDPEVIQAALCICRQPLDLLARRDVRRLAQACAASD
DLTRAAMALIARLEPRPGRRFADVERNVIVPDVIVRKIGRGAQQSFSVRLNPDVMPRLRVHDVYANALRG
GSKGDGHQALQARLQEARWFIKNIQQRFDTILRVSSAIVERQKNFFVHGELAMRPLVLREIADELGLHES
TISRVTTAKYMATPQGTFELKYFFGSGLGTETGGSASSTAVRALIRQFVAAEDPHKPLSDGQIADMLKEQ
GIECARRTVAKYREALKIAPANLRKAL
>gi|319764736|ref|YP_004128673.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MSAVVDETRTQGAPGAPQDGASRLEALHLQKSYGSRKVVKDVSLVVQKGEVVGLLGPNGAGKTTSFYMIV
GLVRSDGGDIRIDGHSVANMPIHRRSRLGLSYLPQEASIFRKLNVEDNVRAVLELQTDADGRALPRDEIE
RRLTELLQELRVDHLRQSPALALSGGERRRVEIARALATQPRFILLDEPFAGIDPIAVIEIQRIIGFLKA
RGIGVLITDHNVRETLGICDHAFIISDGHVLAQGTPSEIVDNAEVRRVYLGEHFRM
>gi|319764737|ref|YP_004128674.1| lipopolysaccharide transport periplasmic protein lpta [Alicycliphilus denitrificans BC]
MRIRLPSLLLLGALALAWLPGAHAEKADRNKPMNIEADALRHDELKQTSVFTGHVVMTKGTIVLRGEQLD
VRQDPDGFQHGVVTAEPGKRAFFRQKRDTPPGQPDEFVEGEGEVIEYDGRADTVKFTRRAELRRYREAQL
TDEVKGAVIVYNNLTDVFTVDGQKTAPAGTSAGTPGGRVRAVLSPKEPASGTAAPPARTEPPVLRPTPSL
GGMQ
>gi|319764738|ref|YP_004128675.1| dsba oxidoreductase [Alicycliphilus denitrificans BC]
MKRREFSLSVASAATAAALGLPVATPALAQARQFKEGKDYVKLGKPVATEAPAGKVEVIEFFWYSCPHCN
TFEPSFEAWLKAAPKDLQVRRVPVAFNASFVPQQKLYYTLEGMGKLPELHARVFRAVHVERQALNKDELI
FDWIAKQGVDMAKFKEVYGSFTVANQVRKASQLQEAYQVEGVPSMGVAGRYYTDGTMAGNMQNVLQVVEY
LAGVVRKG
>gi|319764739|ref|YP_004128676.1| sporulation domain-containing protein [Alicycliphilus denitrificans BC]
MKKQQRGGTIVGFILGVIVGLGAALAVAVYVTKVPIPFLNKNATRASDQDEAQRNKNWDPNAPLYGKNPA
RPAAPASAPEGAAVATPAEPASAAAPVPRTADNRTAASQPSADPLGDLARAKANAAPAPAGADPFQYFVQ
AGAFRTQQDADAQRAKLAMLGWEARVSERETNGRTVFRVRVGPFAKRDDAEALKEKLDGAGVDSALVRVQ
R
>gi|319764740|ref|YP_004128677.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MLSVKQELLAALAGELERLSPGASSRAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGEQLKAALEAT
PAFAQWVDVIEIAGPGFLNIRLKNAAKQQVVREVLAQGTRFGMQPARGEKVLVEFVSANPTGPLHVGHGR
QAAIGDAISNLYATQGWQVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDDCWPTDADNPLAKNFYNGDY
IQDIANAFLAKATVKADDRAFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNLRFDEYYLESSLYANGH
VDATVARLIANGKTYEQDGALWLRSTDYGDDKDRVMRKQDGSYTYFVPDVAYHIQKWQRGFRKVVNIQGT
DHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFL
LSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGWREDCDVGALTDVDLSPLEGPQAQALMLL
LAKYPEMLAAAAAGNAPHDVTFYLRDLAAAYHSYYDAERILVDDEPVRLARLALVAATAQVLHNGLAVLG
VSAPARM
>gi|319764741|ref|YP_004128678.1| psif repeat-containing protein [Alicycliphilus denitrificans BC]
MKKLLPLLAAAGLAFSFAARAADAPAAGASAPSKAPTAQQSKMKTCNAEAGDRKGDERKAFMKQCLSASK
PATQQDKMKSCNADAKTKKLQGDERKAFMKECLSNKPA
>gi|319764742|ref|YP_004128679.1| hypothetical protein Alide_4088 [Alicycliphilus denitrificans BC]
MTTEALLAYAHIMAFLMAATFLASETALCRMEWMNAAVVERLARVDLLYGISAALMLVTGLARTWWGMKG
TAWYWSQPLLHAKVTLFVVIALMSIAPTLRFLRWRRDLRAHGALPSQEAVRGTRRLVMIEAHIMALIPLL
AVFLARGVGTR
>gi|319764743|ref|YP_004128680.1| sodium:dicarboxylate symporter [Alicycliphilus denitrificans BC]
MHAIPASAAQPVRLPFYRQLYFQVVLAIALGVLLGHFEPAYGEALKPLGDAFIKLVKMIIAPVIFLTIVT
GIAGMSQLSTVGRVFGKAMAYFLFFSGLALVVGMVVANVVQPGAGMNINPADLDQTAVKTYVAKSHEMTL
SGFVLDIIPKTLVSPFVGDNILQVLLVAVLFGVALALVGAPGRPVLNFLDALTEPVFKVVGIVMKAAPVG
AFGAMAFTIGKFGLGSLVNLAWLVGSFYVTSLLFVVVVLGIVARLCGFSVLKLGRYLRAELMLVLGTSSS
ESALPSLMEKMEKAGCDKSVVGLVVPTGYSFNLDGTNIYMTLAALFIAQATNTELTLGHQVALLLVAMLS
SKGAAGVTGAGFITLAATLAVVPEVPVAGMALILGVDRFMSECRSLTNFMGNAVATVVVSRWENALDHGR
LDAALNGRPLPAPVPAAETPVGAVA
>gi|319764744|ref|YP_004128681.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MTTFLRRKFLILLILLGGMAGSMFAAGQWAWWHSLREESDSVQRQLALYGQTLSQRIDRYRTLPEVLALD
AQLQDALSHPLSPAEVERLNRKLEQANGASQSSTLTLLNRDGLAVAASNWRTATSNVGVDYSFRPYVQQA
LAQGRGSFYGIGVTTGEPGYFLSQAIRGDGGRILGLVAIKIALQELEREWLQAPDIVLASDAHGVVFLAS
QDAWRYRLLEPLDDEGCRELAATRQYADQPLRPLEYRVADRMDNGGRLVSVLAPALPGRMLWQSQPLPGT
PWQLHLVHATQGSVADSRWAAAAGAGGWLALFLLALFVRQRQRLSALRQRSRQELEAVLRQHAQELRTAQ
DGIVQAAKQADTGLSRSLEHLPQGVVIIDADLNLVAWNSRYVQLFRYPADLMRVGRPIEALLRHNARRGL
LGPGPVDEAIERRLAHLRSGTPHLHESAKDDGTVLEIRGNPLPEGGFVTSYADITSYKNAARELRSLADA
LERRVADRTRDLDAARREAEQANRYKTRFVAAAVHDLLQPLNAARMFTSLLRGHLRGDAERHAVDSIDGA
LAAQDAILGSLLDIARMESGQMEVRIRDVALGPLLQVLGHNFGVLAESRGLALRCVPTRCVVRTDENLLR
RILQNFVSNAIRYSRRGRIVVGCRRDGSGHVRIEVHDQGPGIPEALQREIFEEFRRLDESQDGDRGAGLG
LAIVERLGRLLEHPIGLRSQLGRGSVFSVRVPLGDPAAVQPASPPAAASEQADDAPLRGGSAWVIEDDGP
TCAATQALLQRWGCQVPLAGGAPEALAAAQPEQAPLLVLLDVHLGGGHHGPDVYAELCRRWGQVPAVILV
TAEHDATLRRQAAERGWGFLAKPVRAPALRALMSQTLLRLQTEQKR
>gi|319764745|ref|YP_004128682.1| regulatory protein luxr [Alicycliphilus denitrificans BC]
MPGPALLVADDHPLFRAAVLHVLHERLPQFRTLEAASAAALGAALQEHPEVELVLLDLSMPGARGFSALL
HVRGEFPGLPVVVISSNDDPRVIRRAQQFGAAGFIPKSVPAEAMGDAIGKVLEGGSWFPPMAAERSEADA
ELASRLAQLTPQQFRVLLCLADGLLNKQIAAQLGLAENTVKVHVTAILKKLACYSRTQAAVLVKGLEADN
GL
>gi|319764746|ref|YP_004128683.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MDKLKAFESFVSVATRGSLTAAAKAEGVAPAIMGRRLDALEEHLGVKLLVRTTRRITLTHEGSAFLDDCQ
RLLADVANAEASVSAGGVKATGHLRVTAPAGFGRRHVAPLVPRFRDLHPDVTISLNLSDRVVDMAGEGYD
CAVRVGDLPDSSLVSVRMADNRRLCVATPQYLQRRGTPMHPAELAQHDCLTLSSDASQTRGWAFRVPVAG
GGTEVVHFKPGGPLDCSDGQVLHDWCLGGWGIAWRSTWEVESEIASGRLVAVLEEFAAPPNGIYVVFPQR
KHLPLRVRLWIEYLKHHYAQPTFWRGAHGA
>gi|319764747|ref|YP_004128684.1| malate synthase g [Alicycliphilus denitrificans BC]
MTARTQVHGLQVANELHAFINQQVLPGTGVDPAAFWKGFDAIVADLAPKNAALLAERDRLQKELDTWHKA
NPGPITDMVGYRAFLSRIGYLVEPPKGAKASTANVDAELAIQAGPQLVVPILNARYALNAANARWGSLYD
ALYGTDVIGEEGGAEKGKGYNPVRGAKVIEFARNFLDQAAPLASGSHKDATAYRVEGGKLAVALKDGGAT
GLKDAAQFVGYQGDAAAPSSVLLVNNGLHIDIRIDRGTPIGKGDAAGVADVVVEAALSTILDLEDSVAAV
DAEDKVLGYGNWLGILKGTLTETFEKGGKAMTRGLNPDREYTGADGRPVKLHGRSLMFVRNVGHLMTNPA
ILWGAEGKEIPEGILDAVVTTAIALHDLKGLGTPGIRNSRTGSVYIVKPKMHGPAEVAFANELFGRVELL
LGLPDSTVKLGIMDEERRTSVNLQACIAAASTRVAFINTGFLDRTGDEMHTAMHAGPMIRKGDMKTSAWI
QAYEKNNVLVGLSMGLRGKAQIGKGMWAMPDLMKAMLEQKIAHPKAGANTAWVPSPTGATLHALHYHQVK
VSDIQQELEKIDALAERDNLLAGLLTVPVTASPNWSEQEKQQELDNNIQGILGYVVRWVDQGVGCSKVPD
INDVGLMEDRATLRISSQHVANWLLHGIVTEGQVRATFERMAAKVDQQNGGDPLYQRMHGRFGESMAYQA
ACDLVFKGVEQPSGYTEPLLHAWRLKVKAAAA
>gi|319764748|ref|YP_004128685.1| hypothetical protein Alide_4094 [Alicycliphilus denitrificans BC]
MPLCFYTAAMPEPNSAQCPLCGQSNQCAMAAGLAPAQCWCMTRPVAPEALQRLPPERRGLACICPHCARP
VPAAADMIEHPISEELPCPPTTSK
>gi|319764749|ref|YP_004128686.1| 4-oxalocrotonate tautomerase family enzyme [Alicycliphilus denitrificans BC]
MPTYHIEMMEGRTVEQKRKLAEEITRVSVEILGGSPESVDILITDVKRENWATGGKLWLDRQ
>gi|319764750|ref|YP_004128687.1| hypothetical protein Alide_4096 [Alicycliphilus denitrificans BC]
METTDAPIDGIALTDALMRLLRLKTTPVALQMFERVEDMQAVPRIRRPDGTIHTADQIVGQAARLGFTVG
ITADDLVGPQCSTVLGLAPRSEEWLRGEPMAGVWFATQEDSAAHQRAMHCVPHGRYRAMAVSPWNSGRLP
TPDIVLVYANPAQMILLINGLQWSGYRKLEWGAVGESACADSWGRALATGEPSLALPCFPERRYGGVADD
ELLLALKPVDLAKAIAGVERLAANGLRYPIPPYGTQMDVRAGMSRSYGGRKV
>gi|319764751|ref|YP_004128688.1| glutamine amidotransferase class-ii [Alicycliphilus denitrificans BC]
MCQLLGMNANTPTDVTFSFTGFARRAGHTADHTDGWGIAFFEGRGLRHFVDHERAVDSPVAELIRRYPIK
SRNVIAHIRKATQGMVSLENCHPFVRELWGRYWVFAHNGDLKDFRPRLHAHFHPVGSTDSEHVFCWLMQE
LSKSHAGMPSIEELTLTLRELAARIAPHGTFNFLLSNGQALWAHASTHLYYIERRHPFSQAQLCDEDLRV
DFSAHTTPNDKVAVVVTAPLTSNEQWTAFQSGELRVFVEGECLPK
>gi|319764752|ref|YP_004128689.1| glutathione synthetase [Alicycliphilus denitrificans BC]
MGGPARTSRRAGLDNTAPVHAMNLLFVADPVEHFKIYKDTTFAMMREAHRRGHRLAVCEPQQMHWQRGGK
VVARVRDITLTGHAVDWFSAGEPREAALADFCAVLMRKDPPFDSEYFYATHLLEQAEREGARVFNKPRAL
RDHPEKLAIMEFPQFIGPTLVTREPQDIRRFHAEHGDVILKPLDGMGGMGIFRVGPDGMNLGSIIETLNQ
GGSQSVMVQKFLPEIADGDKRVLIIGGKPVPYCLARIPQGSEVRGNLAAGGLGVARALTARDQQIGDALG
PILHERGLLLAGVDVIGDCVTEINVTSPTCFQEIFEQTGCDVAALFVDALETAIERMAR
>gi|319764753|ref|YP_004128690.1| benzoate transporter [Alicycliphilus denitrificans BC]
MRSASWRAVPQSAAMQFFKDLSLSAFTAGFVAVLVGFTSSVAIVFQAAQAFGATPEQITSWMWALGLGMG
LCSLVPSLILRQPVMVAWSTPGAAVLATAGLAGGFSMGEAVGAFMVCALLITLAGVTGWFERVMSRIPME
IASALLAGVLARFGMQAFAALQTALPLVLAMLLAYLLARRLLPRYAVVLTLAAGIAWAAAGGQMRWSAVH
LAPAMPVFTAPQFSLQALMSLALPLFIVTMASQNLPGVAVMRATGYQLPVSRLITMTGLATLALAPFGAF
ALNFSAITAAICMGPEAHPDRARRYTAAASCGLLYIAVGIFGAVVTGLLTTFPQELVVAIAGLALLSAIG
GGLAGALQSESQREAALITFLVTLSGVTLAGIGSAFWGVAAGSLALLVQQYGRPRAHQPPRRP
>gi|319764754|ref|YP_004128691.1| potassium transporter [Alicycliphilus denitrificans BC]
MATTQKHQQLLARDQGHRTVQTTKSSLAFRTLGAIGVVYGDIGTSVLYTLKEVFGSGHVPFTHANVYGVL
SIVFWTLTIIVSLKYVVLVLRADNNGEGGLVAMLALASQSVKDKAPALRKWMLAIGIFGTCLFYGDGVIT
PAITVLSAVEGLDVVSPTFRRAVIPLTLLILLGLFLLQKRGTAGIGRFFGPIMVLWFLSIGALGVYHIAG
HPEILFALSPHHALRFIAHQPGTTFIILGAVVLCVTGGEALYADMGHFGRQPIRLAWFSIVMPALTLNYF
GQGALLLAEPAAVANPFFHLAPDWITLPLVGLATVAAVIASQALISGAFSVTKQAIQLGYLPRLQIQHTS
TWDTGQIYMPFVNWALFVMIVLAVVLFRSSSNLAAAYGIAVTLDMTITTVLTFFVVRYGWGYPLALCVAA
TGFFFTVDILFFSSNLLKLVEGGWFPLLLGGLVYTLMMTWKRGRELLNKALQDTALGLAEFLESLFVAPP
ARVDGTAVFLTSEPGIVPNALLHNLKHNKVLHEQNLFVTVCNHETPWIGMDKRLEVESLGHDCWQVMVHY
GFKNDVNLPRALSNITGRGIKLDPMGTSYFLSREIVMPTLGRGMAAWREKLFAQMHHNAGAAAEFLNLPS
NAVVELGGKIEI
>gi|319764755|ref|YP_004128692.1| glutamate/cysteine ligase [Alicycliphilus denitrificans BC]
MPRPYNAALDCNTWGYMVPHLVTALTGPINELEQRILDSMPAIERWFRLEWMEHTPPFYSSVDIRNAGFK
LAPVDTNLFPGGWNNLTDEMLPLAVQAAMAAIEKICPEARNLLIIPENHSRNTFYLANVAQLVRIFNMAG
LNVRVGSISPDIKKTTSITLPHGETVTLEPVIRTKRRLGLKNFDPCTILLNNDLSAGAPGILEELYEQYL
LPPLHAGWSVRRKSHHFKSYEEVAKRFGKMLGIDPWLINPLFGNVEGVDFNQGTGMEGLASVVDALLAKV
RRKYKEYGIKEKPFAVVKADNGTYGMGIMTVHDAKELEGLNRKTRNKMAVIKDGQEVHDVIVQEGVLTQE
RVHEAVAEPVVYMMDRYVVGGFYRMHAERGVDENLNAPGASFVPLAFQHSTQLPQPGARPGASAPNRFYM
YGVIARLAMLAASYELEATDPEAETYD
>gi|319764756|ref|YP_004128693.1| cation transporter [Alicycliphilus denitrificans BC]
MRDLFPVLRVLGMLMCMFSLGMVLPGLLSWWLQEAVWRVYPASALATLGAGLALWWLLRGHREELQPRHG
VILVTLVWVLLPLCASLPLWLAMAQLGQPITFTHAYFEAVSGLTTTGSTVLSGLDALPLSVNFWRTFLQW
MGGMGILILAVAVLPLLGVGGSQLFKAEAAGPIKDTKLTPRMTETAKGLWGVYAALSVVCALCFWVGGMT
PMDAVMHMFTTVSLGGLSSHDASFAFFESPVLEAMAVFFMLVASCNFTLYFVALRKGHWRGFWRDPEVRA
TMAVLIGGGLLVALLLWANGVYEPLQALRHGMFHVVSVATTTGYATQDYLAWPVFAPVFMLLLSGVATSA
GSTGGGIKMVRMLILVQQARRELTRLVHPRAVQPVLLGGRVVDNRMIFSVLAFMLVYGATVIVLSMVLLL
TDLDPLTAFSAVLASVHCTGPGLGAIGPSSNYAGLTDFQIWICTLGMLLGRLEILSFMALLSPAFWRR
>gi|319764757|ref|YP_004128694.1| trka-n domain protein [Alicycliphilus denitrificans BC]
MKIIILGAGRVGQSAAASLVSESNDITVIDTDAQRLRDLEARLDLRGVVGNGIDPAVLAEAGARDTDLLI
ACAAQDETNLVCAKVAQMQFNVPSCIARVRTNGFEDGSALLSREGFAVDHILCPENSLVRYIGKLMEYPG
ALQVREFADGRACLVSARARAGAPAVGLEIKLLREQMPDVAVRIVAIYRRFPDEPDRFVPCDGATRIEPG
DEVFALAGRERVPQVLAALRMRPGQPPRVVRRIMMAGGGVVSERLARALAAEQGRFNIKIIEHDAQRCVA
LASNLPEEVLVLQGESSDEELLGEEGIEEVDFFLALSNDDENNIMSCLLAKRMGARRVLALIDRQAYAEL
MHGTQIDIALTPAQAMLGELLAYTRQGDVQAVHSLRRGVAEALEIVARGDRKSSRVVGRRVEDLPLPPAV
HMGLIVRGLPDPDAPPPPEGAIAPVQPRAPEVIIPRSHTVIESNDHVVFFLPNKRLVREVEKLFRVNAIF
F
>gi|319764758|ref|YP_004128695.1| gamma-glutamyl phosphate reductase [Alicycliphilus denitrificans BC]
MGGPGHGAGSAELRHNSRMNALNIAEYTQTLGLQAKAASALMARAPAAIKNKALLALARLLRENVGALQL
DNARDLERARAAGLAEPMVDRLKLTPKVIETCAQGCEQLAAMPDIIGEIIGMKQQPSGIRVGQMRVPIGV
FGMIYESRPNVTIEAASLSIKSGNACILRGGSEAIDSNQALARLVARALAEAGLPEHGVQLVQTTDRAAV
GQLIAMPAYVDVIIPRGGKGLIERISAEAKVPVIKHLDGNCHTYVDDPCDVDMAVNVADNAKTNKYSPCN
ASEGLLVARGVAAGFLPRIGAVYAAKGVQMRGDAEALAILRAVPGADLAEATEQDWSEEYLAPIISVKVV
AGLDEAIAHINRYGSHHTDAILTRDHMHAQRFLREVDSASVMVNASTRFADGFEYGLGAEIGISTDKFHA
RGPVGIEGLTSLKWVVLGEGEVRG
>gi|319764759|ref|YP_004128696.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alicycliphilus denitrificans BC]
MPHLEGQVLWPSDAPPSGAELVLTVELRDVGRQDAAAPLVAQYAAPVRAPVHGDASAFRLDWADPAGLLG
RPTSELALQARVLDGRGTLRYISTEHVAAAQGACVKLQRVG
>gi|319764760|ref|YP_004128697.1| rimk domain protein ATP-grasp [Alicycliphilus denitrificans BC]
MIVVVSYPGEEHTDAVCARLAAAGEPVHRLDLSEFPGRRPLAFGWPGHGAPSLQLLGEEPIDLATADAVW
WRRVRPFEIDPAVGPADRRQFAHSETEQAVLGMLDSIDAPWINPRGADDAAHRKPLQWTQAAAVGLTLPP
TCVTTSADAARAFCDAHRGAGVVFKPFLASIADWRETRLVEAEDLARLELVRLAPVIFQRCIQGVDLRVT
VIGEAIFAAEIDARDSDYPTDMRMVIGQAKIRAVELPAALAARLLALMRRLGLVYGAIDLKQDARGDYYF
LEVNPAGQWLFVESRTGLPITQAHADALRRLAAGQRQRRRHGPSSSQPMRSRQDDAPSRRSGAMAQRRTA
ERR
>gi|319764761|ref|YP_004128698.1| peptidase m12a astacin [Alicycliphilus denitrificans BC]
MATRQETGRGPAGKSGGGDQCECRSGPLAGTAFVGLRGLNNTTGKWLHYADVDGQAIFEGDIVLGSVADM
QADESGNPVLFSVGITSPDGVQFRWANGRVPYEIDAALPNQARVTDAIAHWEANTVIRFVARTPANAAQY
PDYVRFVPGSGCSSNVGRRGGAQSITLGTGCTLGNAIHEIGHAVGLWHEQSREDRDQFVQVNWANIDPAM
QHNFNQHIQDGDDLGAYDFGSIMHYPATAFSTNGQPTLVPRVPLPPGVTMGQRTGLSAGDIAGVLAMYPN
VRPTIKEIAKDPIRDTVKEIAKDPIRDTVKEVRKDPISDTVKEIAKDPIRDTIKEVRKDPISDTAKEIGK
DPIRETVKEVGRDPIGPGPGPLINPAAGGIATPFVLAGASRQPQMDNPGDAMQQAAEQLEQLAAAHQEAQ
AAADALALELEQALQAWRAMGGGEGTA
>gi|319764762|ref|YP_004128699.1| hypothetical protein Alide_4108 [Alicycliphilus denitrificans BC]
MPAPLAAHQLDQLQHDLRALQDMRTSPHAFSSAARGHADLLAALPPRYGEVLLGLLDRLEAGALFTEESC
SFSHQGVVDSLQLWVDKARGVLMG
>gi|319764763|ref|YP_004128700.1| DNA polymerase iii, delta subunit [Alicycliphilus denitrificans BC]
MQIPLNQLGAHLHKGLRSLYTLHGDEPLLQQEAQDAIRAAARAQGYTERSSHTVAGAHFDWSAVLAAGGS
LSLFADKQILEIRIPSGKPGKDGASALQQIAAQADGNDSTLTIVLLPRLDKATRTGAWFSALEAHGATVQ
IDPVERAALPQWIAQRLAAQGQRVAPGEEGQRTLQFFADRVEGNLLAAHQEIQKLALLHPPGELAWEQVE
AAVLNVARYDVFKLSEAVLCGQVARVQRMLDGLQAEGEAEVLVHWALAEDIRALKRVKDAMNAGKPLPMA
LRENRIWGAKERLYERLLPQAGDAQLARLVHFAHVVDGIVKGLKVPDWPTSGWQALSRLALQMCRLGQSA
APAARPQFR
>gi|319764764|ref|YP_004128701.1| rare lipoprotein b [Alicycliphilus denitrificans BC]
MRRRTLLAGLAAAPAAGLLGACGFRLRGAPEFAFRTLYVQAPAGSALARDLVRTLQGGGGELTVLTDPAQ
MPQAEAVLDLLSERQERVAVGMSSAGQVRELQLRLRIHFRLRGQQGQEWIADTELLQQRDISYNETLALS
KEGEEAMLFRDMRNDLVRQLIRRLSAVRPQ
>gi|319764765|ref|YP_004128702.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans BC]
MQDKYNHTEVERAAHAHWNASDAYRVAEDAARPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKG
YNVLMPMGWDAFGLPAENAALKNGVPPARWTYENIAYMKQQMQAMGLAIDWSREVATCDPDYYKWNQWLF
LKMLERGIAYRKTQVVNWDPVDQTVLANEQVIDGKGWRTGAPVEKREIPGYYLKITDYAQELLDHVQIGN
EKATLNGWPDKVRLMQENWIGKSSGVRFAFTHDIEGADGKPIQDGRLYVFTTRADTIMGVTFCAVAPEHP
LAQHAAAGNPRLAAFIEECKKGGTTEAELALKEKEGMPTGLFVTHPLTGEQIEVWVGNYVLMSYGDGAVM
GVPAHDERDFAFALKYDLPITQVILVDGETFDDQRWQDWYADKERGVTINSDNFSGLGHQDAVAAVAHAL
AAKGLGELKTTWRLRDWGISRQRYWGTPIPIIHCEDCGPQPVPEKDLPVVLPQDLVPDGSGNPLVKSEAF
HAGVTCPCCGKSARRETDTMDTFVDSSWYFMRYCDARNGEKMVAEGADYWMPMDQYIGGIEHAILHLLYA
RFWTKVMRDLGLVKVDEPFTRLLTQGMVLNHIYSRRTAKGAKDYFWPHDVEHVLGDDGKIVGARLKNPAE
SGDGLLPAGTPIDYEGVGTMSKSKNNGVDPQHLIEKYGADTARLYTMFTAPPELTLEWNDAAVEGSYRFL
RRVWNFGVKLSAIDKEAALKSVAGATSLKDVEFGKEARALRLEIHTVLKQVDYDYQRMQYNTVVSGAMKM
INALEDFKAMDGAGAQVALIEGFGILLRVLYPATPHITHVLWQGLGYAGALGDLLDAAWPQADPQALVQD
ELELMLQVNGKLRGAIRVAATADKASIEQAALASPDLHKFAEGRAPKKIVIVPGRLVNVVL
>gi|319764766|ref|YP_004128703.1| mscs mechanosensitive ion channel [Alicycliphilus denitrificans BC]
MTETTLALLGSFSPRMQAAIGLAGLLLLSYVAQAVAQYLLLHMVPRIRERMDVRWARVVWHDQVLRRLAR
VVPSLVMQAGIGAVPHLDPVAFAVIRNLAVALTVLQLVRTLNALLDAVLLEQAPGGAPTGTRSIKSYVQL
GKLALTLVGAIVIVAVLIDRSPLILLSGLGAMSAVLMLVFKDTILSFTAGVQLSSNDMLRVGDWIEMPQV
GADGDVVDIALHTVKVQNWDKTITTIPTWRLMSESYRNWRGMSESGGRRIKRTLRLDTTTVRFLSDEDID
RLSRITLLAPYLAHKREAVQATNAALGEDAAAPANLRRLTNLGTFRAYVQAYLRAHPGIHQGMTLMVRAL
EPTAEGVPLELYCFTATTAWVQYEAIQGDIFDHLIAVLPEFDLRMYQSPTGGDIRAGLQRAAMQ
>gi|319764767|ref|YP_004128704.1| aldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MDMFELKYFNLEARYPYKQKYDNFIGGKWVAPLAGRYFDNVSPITGKPFCTVARSDADDVNLALDAAHAA
QAAWARTSVTERSNILLKIADRMEQNLELLAIAETIDNGKPLRETMAADIPLAIDHFRYFAGCIRAQEGG
ISEIDANTVAYHFHEPIGVVGQIIPWNFPILMASWKLPPALAAGCCVVMKPAEQTPASIMVLMELIADLL
PPGVVNIVNGFGKEAGEALATSRRISKIAFTGSTAVGQRILHAAADNLVPSTVELGGKSPNIFFADVLDA
DDEFLDKALEGFSMFALNQGEVCTCPSRILVQESIYERFMERAVARVEAMKQGHPLDKSTMVGAQVSQQQ
LERILGYIDIGRQEGARCLTGGERLRAGGEINDGFFIKPTLLYGQNGMRVFQEEIFGPVASVTIFKDAAD
AVRIANDTDYGLGAGVWTRNGMQAYHMGRAIQAGRVWTNCYHLYPAHAAFGGYKKSGIGRENHKQALSNY
QQTKNLLVSYSPKALGFF
>gi|319764768|ref|YP_004128705.1| sigma-54 factor interaction domain-containing protein [Alicycliphilus denitrificans BC]
MSIPLSGPLAQRQGPAPGTLGATQDYTEVIGKAHQRSQRYGVVAWERPDFSTSAQCDLNDVVENNRFLFQ
YAAPVMETLYEQIANTHSMVLLTTAQGLVLHSLGDKDFLEKASRVALAPGVDWSEKAKGTNAIGTALSEE
TAVTVHGEQHYMHANHALTCSCAPIFNPHGQVVGALDVSGDHRSYHQHTLALVRMSAQMIENQMFAGSFP
KAVRLHFHARPEFLGTLVEGIAVFTPEGRFLSANRSAQFQLGLPFGALQARTFSSLFDLPMSALLELFGG
TSDAPRQLHLHSGVSVWCRADVKPAGPWAAPTFAERPAAAPARKAQLSSLQYLDTGDTQVAAVIHKLRKV
VDRDIPVMILGETGTGKDLLAQAFHNDSARARQPFVAVNCASIPESLIEAELFGYEEGAFTGARKKGAIG
KIAQAHGGTLFLDEIGDMPKHLQARLLRVLQERRISPLGAGKEVDVDVAVVCATHKNLKDLIARSDFRED
LYYRLNGLVVRLPALRERTDFECVVRKLLKSLCDDGQHVGISEPVMELFRSYHWPGNVRQLHNLLRTAVV
MVGREGEIAAEHLPDDFLEELHAMQAPALAPACPLPELVLPGDAGADGHSLQDVTLHAMAQMLRLHKGNV
SAAAKALGVSRNTIYRKKNLLPPDLLN
>gi|319764769|ref|YP_004128706.1| cytochrome c-type protein [Alicycliphilus denitrificans BC]
MRVISLRFLQRQLLTLILAYSAATAMAHGDVVPQAVDTSSLPQLGSKWLEANPCSKGAAQKEALRIGSSA
YNQNCARCHGLEAVSGGIAPGQRKFDEECSGLADAGKKAACYTDMDDYYLGTVRRGRTRDGRVYMPPFEG
TLSQEAIWAIRTYLEVRRGQ
>gi|319764770|ref|YP_004128707.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MLPTILPGSAPSDRGLHEQLLVQTLEQAVDAVVVIDEHNRVVLFNAAAETLWGWPRAEVLGRNVGMLVPP
GIREAHDGYVNTNRITGINRIVGTSRDVPVERRNGTRLWASMSISRVVIGTRVLYTAFLKDVTAQRAQQQ
HLRQLSLVADRSGSGMVVADADRRITYVNAGFTRLLGFAGAHALGRRLPELARGPHTDVGAIDALRACAE
AGQEMQTQLLLYTSDGRPLWASVMMNPVRGAAGELEHIVFVLTDITHTKMHEVLQHKVLDAMAHNAPLHD
VAMLLCREVERIAPEVTATLLEVDADGCMRVLAAPSMPSEIEALTNGVPIGPEVGCCGAAAATGQPALSA
DIATDPRWAPVQRAFTRHGLRACWSNPIKARDGTVLGTLAFYYREPRGPDALHERLVDMGLHLCALLLER
ERERAHIHQLAYYDALTGLANRSMLRTQAERRLHEARRSGAPLALLFIDLDRFKQVNDTQGHPAGDALLS
AVATRLQDSARAGDVAARMGGDEFVLVLPQCGASQAAAVAERLLAAVAQPVEAEGAVLYPSASLGIAMYP
EDGTDADSLLRCADMAMYQAKSAGGQCYHFYSAEMNDQAQERSRLESDLRATLRSGGLALHYQPQMHGQA
LHGVEALLRWTHPQHGPIPPPRVVETAGECGLLDALTQWVLQEACRQMADWRRRGVAVPRVSVNLDADSF
LDPALPDLLAGTLTAHGLQPADLTVEITEAVMLTSDPAVLATARAVRERGIALSLDDFGTGYSSLSALHR
LPIGEIKLDASFVQDIETSATVRSLASAVLHIARGLDLSVVAEGVETPAQRQFLTEQGCAVLQGYLLSRP
MPADALESLLQGGAAAAQ
>gi|319764771|ref|YP_004128708.1| biopolymer transport protein exbd/tolr [Alicycliphilus denitrificans BC]
MAFGRLERTQGPEPMSEINVTPLVDVMLVLVVIFILTAPLLANSIRLELPRVQGTQPGAAPQSVTVSVDK
AGQAFLDGEALAQDALAARLKDVAARRPDTEVQLRADAAVPYGRVAELMGAAQAAGLSRIGFVAEPSKK
>gi|319764772|ref|YP_004128709.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
MDGMRWLHQGDAVAQGLALLLLAMSVASWVVILWKLRLMWRARVDVPRSTAAFWQSPSLAAGLERLPPCD
REALVLPLVRAAAQVACSGSGAALADQGAIAQRLTRALRDALHGVLGRLQFGQVLLATVGSTAPFVGLLG
TVWGIHHALGALAGAEQITIERLAGPVGEALVMTAAGLSVAIPAVLAYNWFGRAIGRIEADLEGFARDLR
ELVAAAG
>gi|319764773|ref|YP_004128710.1| dihydrodipicolinate reductase [Alicycliphilus denitrificans BC]
MTSSSSVPRRVAVAGASGRMGRMLIEAIQASDDCVLAGALDLPTSPAVGQDATAFLGRASGVAITADLRE
GLKNADVLIDFTRPEGTLAHAAVCAELGVQMVIGTTGFSDAQKADMEAAARKVAIVLAPNMSVGVNVTLK
LLQMAAQALATGYDIEIIEAHHKHKVDAPSGTALKMGEVIAEAQGTRLADRAVYERYGHTGERKEGSIGF
ATVRGGDIVGDHTVLFAGTGERVEITHKSSSRAGYAQGSLRAVRFLAGQRAGMFDMFDVLNLK
>gi|319764774|ref|YP_004128711.1| smpa/omla domain-containing protein [Alicycliphilus denitrificans BC]
MPKPMSAPARRGARRGAIVLLAAVLAGCAGTGERLSNVVTPYKVAVVQGNFVSREQVQMLQPGMGRQQVR
EILGTPLMVSVFHGDRWEYVFTLKRPGVEAQTRKLTVFFKDNVMDHVEGDEMPSESEFVASLTSKVSKPK
VPQLEATEAQLARFPKAESAVPGPSPAPAAPPVASYPPLESPRR
>gi|319764775|ref|YP_004128712.1| ferric-uptake regulator [Alicycliphilus denitrificans BC]
MTNIDELKSTGLKATLPRLKILEIFQKGAQRHMTAEDVFRVLLDERSDIGLATVYRVLTQFEQAGILIRS
NFESGKAVYELNEGQHHDHFVCTACGKVEEFYDPEIEKRQNLIAQSKGWVIQDHSMALYGQCASCAKKR
>gi|319764776|ref|YP_004128713.1| hpr serine kinase domain-containing protein [Alicycliphilus denitrificans BC]
MKPNVVSADVLFEEFRTLLKWEWVAGLGASERRFAEVAVRAARSGADLVGYLNYIHPYRAQILGEREVAY
LTNATPGDCKRRIARIVTLEPPVLVLADGQAAPEEVVSMCERAQIPLFATRESAAFVIDVLRAYLSKHFA
DRTTMHGVFMDILGLGVLITGESGLGKSELGLELISRGHGLVADDAVDLYRINQTTIEGKCPDLLQNLLE
VRGIGLLDIRAIFGETAVRRRMRLKLIVHLVRKETMERDYERMPYEPLTQDVLGVPVLKVVIQVVVGRNI
AVLVEAAVRNTILQLRGIDTYQEFVERHRRAMEGGGA
>gi|319764777|ref|YP_004128714.1| phosphoenolpyruvate-dependent sugar phosphotransferase system eiia 2 [Alicycliphilus denitrificans BC]
MNRLASILPPAQVLVSVDATSKKRAFEEAGLLFESQHGLSRALITDSLFARERLGSTGLGHGVAIPHGRI
KGLKSPMAAVFQLAHPIGFDAPDEQPVVLLIFLLVPEAATQKHLEILSEIAELLSDSALRERLKSCADAA
SLHGMISGWQSAQSA
>gi|319764778|ref|YP_004128715.1| ribosomal subunit interface protein [Alicycliphilus denitrificans BC]
MNLTISGHHLEVTPALRSYVTSKLERIIRHFDQVVDVKVLLTVEKQKEKEKRQRAECTVHVKGNDLFVES
AHFDLYAAVDELMDKLDRMVVRHKDRMQDHQAGVRRATVQAAAAS
>gi|319764779|ref|YP_004128716.1| phosphoribosylaminoimidazole-succinocarboxamide synthase [Alicycliphilus denitrificans BC]
MTQPSTSALHTSALTSLPLLARGKVRDNYAVGDDRILMVASDRLSAFDVIMGEPIPGKGELLTQMALFWF
DKLGHVVPNHLTGEAPESVVTPAEAPQVRGRSMLVKRLKPIPIEAVVRGYLAGSGWKEYQESRSVCGVPL
PDGLTNAARLPHSIYTPAAKAAMGEHDENITFERTVEMVGPDLAARIRDVSIQLYEAAAAIALAKGMIIA
DTKFEFGLDKDGTLVLMDEVLTPDSSRYWPVEGYAEALARGENPPSYDKQFVRDWLEQAQVGGKPWNKTA
PAPRLPREVVEKTAAKYREALQRLTA
>gi|319764780|ref|YP_004128717.1| thioredoxin [Alicycliphilus denitrificans BC]
MIDVTLETFETEVVAASMSQPVLVDFWAPWCGPCKTLGPVLEKLETEYAGRFKLAKIDSDQEQQLAAMFG
IRSIPTCVLMMNGQPVDGFMGVQPEGQLRAFLDKHVPSAEALQAEEQEEEAQDALAEGDTEGALEKLQHA
VATDPANDEARFDYVKLLLQLGREDDAKVAFAPVIAKAEASRRLGALKAWMDALDFVAAGAHGEGADAQF
DAKITANKRDFEARFGRARWLMARQRWQEAMDELLEILMRDKAWNDEAARKTYVAILEIIEPPKPKVAEG
QIPPEDPVVAAYRRRLSSVVLS
>gi|319764781|ref|YP_004128718.1| phosphoribosylaminoimidazole carboxylase, catalytic subunit [Alicycliphilus denitrificans BC]
MNPIQIGVVMGSSSDWDTMQHAAAILQQFGIAHEARVVSAHRMPDDMFRYAEAAAGRGLKAIIAGAGGAA
HLPGMIAAKTCVPVLGVPVASKHLSGVDSLHSIVQMPKGVPVATFAIGAAGAANAALFAVALLANNDPAL
RERLEAFRAEQTAAARAMTLPPVAT
>gi|319764782|ref|YP_004128719.1| phosphoribosylaminoimidazole carboxylase, atpase subunit [Alicycliphilus denitrificans BC]
MSAGRGVILPGATLGVLGGGQLGRMFVHAAQAMGYSTAVLDDDAASPAGLVSQHHIRAGYEDPQGLAELA
RLCAAVTTEFENVPAAALDILARSLPVSPAGGAVAIAQDRAAEKAHFVRCGVPVAPHAVIATPAQLAAVD
AGLLPGILKTARLGYDGKGQARVNTPQELAAAWDDLGRVPCVLEKMLPLAHECSVIVARGRDGHVVHLPV
QRNLHRGGILAVTEVHEGNLPPGQARQALAAAKSVADGLDYVGVLCVEFFVLQDGALVVNEIAPRPHNSG
HYSQNACDVSQFELQVRAMAGLPLVQPRLHSPAIMLNLLGDLWFRDGDGPATPPWDEVLALPGCHLHLYG
KRDAKRGRKMGHLNVTGATPGAVRATALKAAAILGIEPF
>gi|319764783|ref|YP_004128720.1| sua5/ycio/yrdc/ywlc family protein [Alicycliphilus denitrificans BC]
MILDGTLPSSVQAAARLLARGELLGLPTETVYGLAADADNDAAVARIFAAKGRPANHPLIVHVADSTAIT
HYAKEVPLFAQQLIDAFWPGPLTLILPRLPAAARASTGGQDSVGLRCPAHPVAHAVLAACQRLDPPVWGV
AAPSANHFGKVSPTTAQHVADAFGDELLVLDGGACAVGIESTIIDCTRGVPVLLRPGAISRADVQRACGL
RPLSKEELPTHTPRASGTLLAHYAPTARVRLMDARQLQAGLDVLGADAAHLAVYARAPLRSASSRIILRR
MPDDAAAAAQQLFAALRGFDDAGARLIWIETPPDTPDWEGVRDRLQRAAAAG
>gi|319764784|ref|YP_004128721.1| lipase [Alicycliphilus denitrificans BC]
MPANWMRRSFLAAACASAALLAACGSSDVESAFTPTRFVAFGDAQADVGQVGGKSYTVNDGTLNIWTKQL
ASRYGGTIAPVSASGLSYAQGNARVAATPDAAGDASTPTVTQQVTQFLAGQQPADGDLVIVSAGASDIIA
GMAAVQAGTLTEAQYVDAASQAGKNLAAQVRRLSDAGAKHILVTGTYDLSRTPWAVAIGKQDLISSASLR
FNNDLLVAIEDLRKTVFYVDIAYYVNLFQGNPGGYGFTDGRTPVCTSVDAGPGIGIGAGEVNSSLCTSST
LLTDADPGRYVFADKVYLTPAAHRRFGDYAYDRLRQRW
>gi|319764785|ref|YP_004128722.1| hypothetical protein Alide_4132 [Alicycliphilus denitrificans BC]
MSAPQLLAIVEVEKAERVYCAQPGCKHTVYKAIHVVQDGGQLMALGSTCFATRYGSLTALGQAQHWGGKG
KLLTSEERALLQGNTEALLARFAEEEAKLRAEAEQKLKRLRERLSPLSYPPTAPPVQPRNQGAPGSAPRQ
SMPWSWMKPMTSVAAFKMADGSGWVRVQHKDGRQFIVPWPTFEGWEEAWPPAVGRPNLDVGGYEAGNVIE
AVAYLRARASREKVTGLWNDVMSVLGPKPEM
>gi|319764786|ref|YP_004128723.1| atpase [Alicycliphilus denitrificans BC]
MSEWNFYGRTEPLAELRRIVESGRWFFCRIEGRRRIGKTTLLSELAKKDADLSNRLVYMQVPDSDERDVA
YTFRQSLSNCEHEQGRVLATSVTNFATMAASIGRLCAAGFIVVIDEFQYFTRSKLYAFNSFLQAEVDKLR
GAQLKHGGLFVLGSLQSEMNALLDDKSAPLYGRVTAQIPLDHWDFEDLLSVFASQGLQGPNQWLTLWTFF
EGVPKFYHDAYEQELFQVAAPEFSSELLRRMFIRSSSPLSEEADTWFLRELRGKAVSVLHFLADHAGCSH
AEIVAALTDEDEKKALGTHIARLVDRYKMVDKLQPVFSDSKSRNARYYIADNFLQAWLAVAKPAREEARL
KPLEKAIAPALRRLETLEGFAFEKLIRSLHLEASRKGKGDFELSELKLGYWNRPRDASKAIEIDLVALDE
ANKKVRFGCCKRASSAHDLLVFEQHVSAFLQTSGHKHLMGWEREMVLFSPLFSKQDMSHYQSKGYMTRDL
LDYANMFGNAPSIQRAQ
>gi|319764787|ref|YP_004128724.1| hypothetical protein Alide_4134 [Alicycliphilus denitrificans BC]
MSTLLYHPPDNPVEESPFDRAILELAKGRDVKIVSPYISLSYLERIIRVSQSWRLISDVLEWLSATPARE
RNAAYEFLKCHEGLVHHYPAIHAKTVISQAAAYTGSANLTDAGVLRRTEFGVVLREKAQIDEIHRWFAAL
WDQTSPPSLAGVRELITWLNQLSAPAEDTLSAKGTYLESNALKVRARLVKVLGEHPVSIATRLVERHETS
KKALQIKSLAKESEPFDIDATVSSFIEKHAELGFSFSELHSALMGLSGNIRVRETYFAVLNYCASRPQSI
FSEDAVNRLVYRQGLFLQSSKEYLDEALAPLDVLLEWLFKSLSFSEQRPLPASAPTALAPQPPHAAYRLL
VRELATGGFIHLEQGARLNDQASWSPRLRLLTRAYLAWETSLAKHRIQMAATLGMVMKAALTAAQRKQSD
VLFAQLLQLAITHGNPLPPNRLTGAVSDIQQQADTVLRKVNELCRRYPDTVRPVITLQRPSDRPSYIDVV
LQVKHEDDLSFLPMTAKLLASPSLTMKRVRQTTEA
>gi|319764788|ref|YP_004128725.1| hypothetical protein Alide_4135 [Alicycliphilus denitrificans BC]
MKQANKIRWGTERRLEFIEFRIYWEGGIRRADLTETFGVSTPQASGDLSLYQDLAPGNMVYDSSEKKYIA
TAEFKAKYCDVSAERYLAYLRDWAGDRLNLSDSWMSLVPAADTVPVPSRRINPLVLKQIVAAVRNARSLE
VLYRSLNKDGGAHAWRRISPHAFAFDGMRWHVRAFCHRDSSFKDFVVSRFDKARHEEPAECDYAQDRLWH
EFVDVVLQANPRLKPHQRVAIEEDYAMENHRLTLSVRKALLFYLEKHLRLDYPDEGLPAEAKPLCAVNRE
VFSRQAP
>gi|319764789|ref|YP_004128726.1| hypothetical protein Alide_4136 [Alicycliphilus denitrificans BC]
MNPRQFYEARAKSIVKEVRESKDISYKELARRLDATGVTVDVQVLINRINQGKFSFAFALQLLAVMGVEH
LEIPKQQVPFKAPGVKKLPG
>gi|319764790|ref|YP_004128727.1| hypothetical protein Alide_4137 [Alicycliphilus denitrificans BC]
MKVEVQLLNDKGRTVPVAQLRVQKRFSGVLSIGEVRSTEFGRTLIAAHLRSADGEELLPLLHDAVVLRYE
CGRMRIRGVEVLNGAQHGQTWDVKVAAC
>gi|319764791|ref|YP_004128728.1| hypothetical protein Alide_4138 [Alicycliphilus denitrificans BC]
MLKVFLHNAEPGGMTPFNRLGRLDIGYDKLDAYADYKVILTQAGVGEYPPAKVAAYPRWTASIWDLVMRS
VCLCMWREEALPLVGLARRGAYADHLTAVVEHWPDGFELGRSTVGMATVRMQRKKCHYVARFEDDILGEQ
VSTEFVHTPDALSFWDLLARAYAWTCHESFRLPPRPELYTSLTIEEGGETLVPLEMVKEPARTGLARWMM
SHELKPLTSKTVTGPCIREADYVRFLQRAI
>gi|319764792|ref|YP_004128729.1| transposase [Alicycliphilus denitrificans BC]
MSTTDAPRARVRRASSEATKFHMSSRAVDRSVEEYASWSDKKCVKHLAMVRWGSAETMPCPHCSTCTRHY
FYEADLRWKCKHCGSKFSVTSQTVFASRKMPYRKLLAALHLWACGAAGQPALELRRMLQFKSYNTAFTLV
SKLREGLIRGFNTGLISGVVEMDGAHASGRRASEKRGKPQNYRSSEEVQESEKQALLTTAARQKKRREEK
AAAIAAGGNVDPGTGQVFPETRRLVFTLRRRSGAKGQGAILTRVGVGLTESPDVVEALATTYVAIPESVL
ATDTGTAFSKLGKRFQLHLQVNHSETLSGPEGQHNNNAESFGARQDRSEKGVYLNIEPKYLLDYATETAF
REDNRRRAPGAQADLALHHALTVGESHFWRGYTHGKHRSYEMLATGNRNYPASGPPKGVPQMSVGVGRLP
HEAAGRLGARTFSI
>gi|319764793|ref|YP_004128730.1| transposase is4 family protein [Alicycliphilus denitrificans BC]
MRGSQDFQGAMFSYISLEERVPQAHPLRKLRAVVDALLATMNREFEAVYARRGRPSVPPEMLLKALLLQI
LFSIRSERQLVEAINYNLLYRWFVGLNIEDKVWDHSTFSANRERLFNEDLARAFFERVKLSAQWGKLASD
EHFSVDGTLIDAWASHKSFKRKDDDSGTPPGRNPEVDFKGQERCNDTHESTTDADARLFKKSQGDKSRLC
HMGHILMENRNGLIVDVEITHASGTAEREAALAMLERRGNRNKRATVGADKGYDSKAFIKGCRKLKVTPH
VAAKDKHSAVDARVTRHEGYKTSLKVRKRIEEAFGWIKTVGGLAKTKLIGQAKLTGQALLCFATYNLVRM
GSIGGWWDAHHA
>gi|319764794|ref|YP_004128731.1| hypothetical protein Alide_4142 [Alicycliphilus denitrificans BC]
MKLLPLRAAVALTTALTTAVAPLLAGAQTSYEFKKYVPTLAVTGSGSGQAPGAGGTSPAPQPALQLSTTA
INFGNVATYTTETRQVLVSNPGTGPLTFTAAPAVTGATEFAAGLTTCGASLAAGADCLAEATFSPTATGT
FKGVLSFTSMLANSPHEVTLVGTAFNPIRQVALTSANPSLNFGWQVTGSTPPVKSWVFQNQGNVPMTLGL
SGLPAGVSQQNGCVDVASYASCTISLSLDTTVERTIPATTVSFTGDWSTALAQALSVEGGVADSGFKQVY
APVTGLTFSALTFHQGLFYSVLYGTNPVVGTGSFLYASADGKNWTNKGRIQSSAQPADGIAVSASGRILV
AGLSSGSTGGKVAVSDDGGSTWSVTLSTGGLGKGVAINDAGVAVFTASNIPQGYRSTNSGTTWSTNAVSS
GTSGSRIVSDRGTHFATLNGSYLRYSLDSGANWTQVSAGGGPLRDLMYVGNQVWFVGEGEASPGRVCSAT
LGVTPVCALISGSPALTSLTAGNGVFVVGTSTNNLAYKSTDGTTWSPITGLPGSPRLAYGNGLYVGVRSQ
NAYVAVAP
>gi|319764795|ref|YP_004128732.1| hypothetical protein Alide_4143 [Alicycliphilus denitrificans BC]
MLAPVNTRKMKPTPSALKWLAEKRARVAFDLDFNLKLIADLQTKAAALQEDLAAIDRSIGLYDETIDPSA
IEPVNGWRGNYGKRGALKAAVVEVLEASAPNWVSTDAIESAIRAKFGIVFETPVVRKHWYNGSFRNTLKT
LVTSGRVERLKDPDSRPNETGHWRIKIETPRLADLAR
>gi|319764796|ref|YP_004128733.1| ompw family protein [Alicycliphilus denitrificans BC]
MARFISHALSAAALLALCGTASAQFTVRGGLSHIAPHSSATDAVGPMLPGPPSGISIDVQNKSTLFLSLA
YGFHPNMEFELALGYPPTHDVNAKIAPWLPPHIVAFDGRKVAEVRQIAPTLFFNYKFGDATSRWRPFVGV
GLNYTNFDKRTSTAANNALNGGPTDIRLSDSWGLAGQVGLSYRINERWSITGAVATARVKSKLTTHTAGV
QREIDIRFHPVVLTVNAGYTF
>gi|319764797|ref|YP_004128734.1| hypothetical protein Alide_4145 [Alicycliphilus denitrificans BC]
MNKWTGLAMASAAAILAACGGGSDPGGSTETDLSGARGSLMYNPPLRVTALSAAELKDRLAANPSGQSLL
ALAGAPKCGVNIHYIEYGTVGGAGEKTNASGALMVPTGDAAGCSGARPVVLYAHGTSTDRAYNIADITEP
ARPGASEGTLLAAMYAAQGFIVVAPNYAGYDVSKLGYHPYLNADQQSKEMIDALTAARKALPGINGQDGG
KLLITGYSQGGHVAMATHRALQAANQIVTASAPMSGPYALGAFGDAVYYGNVNLASTVFTPLLASSYQKA
YGNLYAQPSDMFEAAYATGIDQLLPSTTPIDTLFAQGKLPQTQLFSSTPPDPAFAGVTPPTQPPELAPLF
ALGFGSNNLIKNSVRLAYLQDAIANPDGAVPSVTTGAQAAAPRHPLRQAFKANDLRNWAPRRPVLLCGGN
ADPTVFYKVNTTLMQSLWSAPSPLALPTGLLTVLDVDSASGGASDPFAAVKAGFAQAKANAAAQGGANAV
VQAYHGSLVPPFCNVAARAFFQQVLASGG
>gi|319764798|ref|YP_004128735.1| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase [Alicycliphilus denitrificans BC]
MLPLTLARACRRLRRAACAGIASLCLGACAAAPSGPPTDAGALPPAVDAALQRAGLPRTALSAMVVDVEG
RAPARLAYQGDKAGNPASVMKLVTTFAALDMLGPAFTWDTPVYLDAMPRDGRLRGNVYIKGQGDPKLVVE
RLWLLMRSLRALDVARIEGDIVLDRSAFALPAHDPAGFDGEPWRPYNAAPDALLLNYKAVAMDFMPDAAA
GVARVRYAPPLAGMDLPASVPLAPPGTACGDWRTALRADFADAARIAFQGVYPQACGAREWSVAPADPGG
YAARAVEGMWREVGGTLAGRVRDGQVPAGLQPAFVSRSPALAEVVRDINKHSNNVMTQQLLLTLGLHRGG
QGSFEAARAVLAQWWRQRMGGTDAPVVDNGAGLSREARLSPRALARMLQQAWASPVMPEFVASLPVAGVD
GTLRRRPVLAAGAAHLKTGSLRDVAAMAGYVLAASGRRYVLVAIINHPDAAAARPALDALVDWTARDTGL
>gi|319764799|ref|YP_004128736.1| peptidase m22 glycoprotease [Alicycliphilus denitrificans BC]
MNLLAFDTSTDTLSIAVLHGALVCEHHGPGGAQASATLIPAILALLAQAGLSFERLDAVVFGRGPGSFTG
LRTACSVAQGLAFGARGGQGVPVLPVDTLLAVAEEARAAHGCTRVVATLDARMDEVYTAPFEWQPDATAA
TGGHWRAPQDFGLCAPEAVEVPAGWTLAGNARAAYGARLAPGAPHVQALPTATALLRLAPALLAAGCAVR
ADAALPRYIRDKVAQTTAEREAARRATPAPHA
>gi|319764800|ref|YP_004128737.1| ribosomal-protein-alanine acetyltransferase [Alicycliphilus denitrificans BC]
MNAMAQPPATTEARFEPLTPERLDALMAIEQNAYSHPWSRGNFTDALAAGYQVQLLTAGAQILGYFVAMP
GVQEAHLLNITVAPAFQRQGWAHVMLDALALWARSQGAQWLWLEVRVSNERARHVYETHGYRRVGLRKCY
YPGPDGQREDAVVMSLPL
>gi|319764801|ref|YP_004128738.1| phage spo1 DNA polymerase-related protein [Alicycliphilus denitrificans BC]
MQAAAPAPARRPTPEPAARAAPAGAPPGGLLLGAPQALYPQADPAATPPGLGEAWLVVLESPTPGEPLAG
EVGRLLDNMLRAMGLHRHPRTFVATLGRPAPGLPAEGVEPAAGLQQALATLRPAMVLVLGLAAARAVLGS
REPLGRLRAATHRLADGTPAVVSYDPAYLLRAPEAKAAAWADLCRALALVRHTAAG
>gi|319764802|ref|YP_004128739.1| magnesium and cobalt transport protein cora [Alicycliphilus denitrificans BC]
MLNIFSLANGRLVQEEIESLEELARFQPIWVDLESPTLEEKRWIKQHYGLSIPEDAMDEDIEESARFYEE
DNGELHIRSDFLVDDDEEPRSVRVAFILNQHNTGLKSCGVLFSIHDEDIPVFRLLRMRARRAPGLIEDAK
EVLLSLFDTDVEYSADTLEGIYDDLKKVSTQVLEGHVTDDHAQRVLADIAWQEDLNGRIRRNMLDTRRAV
SFMMRSKMLNAEQFEDARQILRDIESLDSHTQFLFDKINFLMDATVGFLNINQNKIIKIFSVASVALLPP
TLIASVYGMNFRAMPELEWEHGYIYAIALMIASAVVPMLYFRKRGWLK
>gi|319764803|ref|YP_004128740.1| hypothetical protein Alide_4151 [Alicycliphilus denitrificans BC]
MRTIQLPIVMAIVGLPLAITAATVVMRALAVPRHRQFTKRIRHSIHCDENIVFLAIQPWFRQVLGPRPL
>gi|319764804|ref|YP_004128741.1| hypothetical protein Alide_4152 [Alicycliphilus denitrificans BC]
MDAPFTTGGVSIFGGPHASERVAQAVHLLEHLAPYLQRDGRDRLQLPGRAAVLVLAEELP
>gi|319764805|ref|YP_004128742.1| mta/sah nucleosidase [Alicycliphilus denitrificans BC]
MTTAILSALSEEQGSLVHALAQPERVMHAGRAFWRGGLQGQPVVLALSGIGKVAAATTATVLAERFGVER
IVFTGVAGGLGAGVQVGDVAVAHGFLQHDMDASPIFPRWELPGYGMARMPCDAGLTAMLFEAVNDYLTRG
KGGFDPQNPGIGHSHASRVHQGLIVSGDRFVSTSAESGALRQALAAAGHEALAVEMEGAAVAQVCHDYGL
PFAAVRTISDRADDGAHVDFPHFVRHVASRYADHIIREFLRLLSK
>gi|319764806|ref|YP_004128743.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MTDRPWLAAYPQGVPADIDPTQYQSLVQLMEQAFRDYADRTAYSFMGKDISFGETDALSRRLAAYLQSLG
LARGDRVALMMPNVPQYPIAVAAVLRAGFVVVNVNPLYTPRELEHQLKDSGAKAIVIIENFAATLQACIA
HTAVKHVVLCAMGDRLGLKGLLVNYVVRNVKKLVPPYQLPGAVRFNDALAKGASAAFSQPELAPDDIALL
QYTGGTTGVSKGAVLLHRNVIANVLQSEAWNAPATSKIPAGEQPTAVCALPLYHIFAFTVNMMLSMRTGG
KTILIPNPRDLAAVLKELSRHRFHSFPAVNTLFNGLANHPQFNTVDWSHLKVSVGGGMAVQAAVAKLWLE
KTGCPICEGYGLSETSPSVSCNPVTAKEFSGTIGVPIPSTYMRILDDDGHDISATGQPGEIAIKGPQVMA
GYWQRPDETAKVMAEDGYFKTGDIGTMDERGYFKVVDRKKDMVLVSGFNVYPNEVEDVVALMPGVLECAV
VGVPDDRTGEAVKLVIVKKDPVLTEAQVREFCKANLTGYKQPKVVEFRTELPKTPVGKILRRELRDKK
>gi|319764807|ref|YP_004128744.1| nad(p)(+) transhydrogenase (ab-specific) [Alicycliphilus denitrificans BC]
MSQSLATVAYIGATILFILSLGGLSNPETSRRGNLFGMIGMALAVLATVFGPRVSPSGLAWIVGALVIGG
GIGLYAARIVKMTQMPELVALMHSLVGLAACLVGFASYVDTSIQLEGAEKAIHEVEIYVGILIGAVTFSG
SLIAFGKLAGKIGGKPLLLPARHWLNLAALLVVIWFGREFLNAHDVQAGMPALVVMTVIALLFGVHMVMA
IGGADMPVVVSMLNSYSGWAAAATGFMLSNDLLIVTGALVGSSGAILSYIMCNAMNRNFISVIAGGFGSG
GGAPAKKGDAAEPQGEVVPISAAETAELLREAKSVIIVPGYGMAVAQAQHTVYEITQTLREKGVNVRFAI
HPVAGRMPGHMNVLLAEAKVPYDIVMEMDEINEDFPDADVAMVIGANDIVNPSALEDPASPIAGMPVLEV
WKAKTSIVMKRSMASGYAGVDNPLFYKENNRMLFGDAKKMLDEVLVTLKG
>gi|319764808|ref|YP_004128745.1| nad(p) transhydrogenase, alpha subunit [Alicycliphilus denitrificans BC]
MQTSPTPPVQRIGVPRETFPGEKRVATVPDVVEKLIKLGFTVAVESGAGDAANFSDEAYRAAGAEVLPDA
AALWAASDIVLKVRPPSSEEAALMREGGMLIGFVWPAQNPDLMQQLAAKKATVLAIDCLPRTLSRAQKMD
ALTSTAGVSGYRAVIEAANAFGRYFNGQITAAGKVPPAKVFIAGAGVAGLAAIGTAANLGAIVRANDTRA
EVADQVKSLGGEFVKVDYEEEGSGGGGYAKVMSEGFQAAQRQMYATQAKDADIIITTALIPGKPAPKLIT
AEMVQSMKPGSVIVDMAAEQGGNCELTVPGEAVVRHGVTIIGYTDLASRLAKQSSTLYATNLLRLVEELC
KAKDGHAVVNMEDDAIRGLTVIKDGSVTWPAPPLKAPPAPAPKPAAVAPVEQKKGGHGHGSTGPLPATTL
AVIFAVAAVLFWFIGAYAPAAFLGHFTVFVLACFIGYMVVWNVTPALHTPLMSVTNAISSIIAIGALVQI
APPEAGASGRPDGLILWLAFAALVLTAVNMFGGFAVTRRMLAMFRK
>gi|319764809|ref|YP_004128746.1| hypothetical protein Alide_4157 [Alicycliphilus denitrificans BC]
MTLTSSIIRRLLPCALVVLAACAPLSPTQTEYPVGRARLALPPGAWEDLGAADEAIEVLPAPASTMALQA
RAVALRGARQELLAVLRVHTNRDNHPRDPVYWTGRCPQQEGLMVEDATRGSTVRVDCLRFKRRADGTQWL
EKNDPDFARWLDRRKIVMGKPYSYLSYRYAATGSAVVEVDVLVDPRLLTPVARNNHEFLAAGWPALQWGR
DLAQAVRVSTGMMDGYLAIPPFPFAIPIP
>gi|319764810|ref|YP_004128747.1| fructose-bisphosphate aldolase, class ii, calvin cycle subtype [Alicycliphilus denitrificans BC]
MPLVSMRELLDHAADSGYGIPAFNVNNLEQVQAVMAAADEVGAPVILQASAGARKYAGESFIKYLILAAA
EAYPHVPLVMHQDHGTSPAVCEGALKLGFGSVMMDGSLKEDGKTPADFDYNVRVTRQVVEMAHKVGATVE
GELGCLGSLETGEAGEEDGIGAAGKLSHAQMLTDPEEAAQFVKATQLDALAIAIGTSHGAYKFTRPPTGD
VLAISRVKEIHARIPNTHLVMHGSSSVPQDLLDIINQYGGKMKQTYGVPVKEIQEAIKHGVRKINIDTDI
RMAMTGAVRKFQAENPDKFDMREWMKPAREAAKAICKQRYLEFGCEGQGAKIKGHTLEQMAQKYAAGALG
QVVN
>gi|319764811|ref|YP_004128748.1| pyruvate kinase [Alicycliphilus denitrificans BC]
MSMRSRRATKIVATLGPASSDPLLLEQMIAAGVNVVRLNFSHGKARDHVERAAKVREAAQRAGREVAIMA
DLQGPKIRVGKFAEGRVHLEVGQPFVLDASRTEPGDLQGVGLDYKELPRDVRAGDVLLLNDGLIVLQVDA
VRGEAVHTTVRIGGELSNNKGINKQGGGLTAPALTAKDMEDIKTAMSFQADYVAVSFPKNATDMEMARQL
CNVAAAEFRHKPGLIAKIERAEAIPRLEEILHVSDGIMVARGDLAVEVGNAAVPALQKKMIRMARDMDKV
VITATQMMESMISNPVPTRAEVSDVANAVLDGTDAVMLSAETAAGKYPLETVQEMAKICAAAEAAEDPDR
DADFDGQTAGRVDQSVAMGALFTAHHLGAKAIVAMTDSGSTALWMSRHRIHIPIYALTPKVATQRRMAMF
RNVRPLLMDTSADRDTALEQAENHLKMRNIVQQGDLYVITCGEPMGAPGGTNMLKICRAR
>gi|319764812|ref|YP_004128749.1| peptidase m24 [Alicycliphilus denitrificans BC]
MTSIYTQRRARLAAQLGAGGIAIVPTAPQYGRNRDSEYLYRHDSYFYYLTGFTEPDAWLVLSAEGESTLF
CQPKDLEREIWDGYRLGPEAAVAALDVNAAHSVAELDARLPRLLENRSQVWFPFATHAGLAARVEGWMDQ
VRARVRYGALCPAQQGDLCELLDEMRLIKDAHELAIMRRAGAISARAHVRAMQRSSRMLRAGEDVREYHL
DAELLHAFREEGSQYPAYSSIVASGANACVLHYRADTAPVRAGELVLIDAGCELDGYASDITRTFPADGR
FTGPQRALYDLVLESQKAAIAAIRPGRRFNDPHDAAVAVLAQGMLDLGLLDKDKVGGVQDVIDKRAYFQF
YMHRTGHWMGMDVHDCGSYVEPGEVGRVSERKDPLSGELIKDRPSRILRPGMVLTVEPGIYVRPAPGVPG
QFHGIGIRIEDDAVVTDDGCELMTRGVPVEGDEIEALMRA
>gi|319764813|ref|YP_004128750.1| enoyl-CoA hydratase/isomerase [Alicycliphilus denitrificans BC]
MGEKAMYSQISYPTPATAVLTIADAGPLNVLSTPVIRALTAQLGELAENSELHCLVLRGSGSRAFIAGAD
IKEMAALTASTGRAFISALRDLCNAVRHFPVPVIVRLQGHTLGGGLELAMAGDLRIAADDAVVGMPEVKV
GIPSVIHAAMMPAQIGAARAAWLLLTGENIPATQAQQWGLINECVPRDRLDERILEIAAGLAQIGPVVLR
QQKRLLRRWECMTVDAAIDDSIAEFGEAFKTGEPQHHMNAFLERKNKRS
>gi|319764814|ref|YP_004128751.1| hypothetical protein Alide_4162 [Alicycliphilus denitrificans BC]
MTHVKKTLLAVALCAATAPAAWAAGYPERPVRLIVPYAVGGATDVIGRVVARYLGEELGQSVVVENKPGA
GGSTGSLHASKQPADGYTLVMMVESSHAVNPNVYAKPAYDPVKDFTPISNIANVPGVMVVGFDSAYKSVR
DVVEAARKAPGKLNYGSSGNGGYSHLSGALFGNTTGTQITHVPYKGLGPALNDLMAKQIDVVFDNMPSSG
GLIAGKQLRALAVSSPKRLASLPDVPTYAEAGLKPMNEMSWYGIGAPANLDPAILARLSTALKKTLQNPE
LVKTIEQQSAIVDYQTPQQFKETVERSNKAWARLVKDIGFEKM
>gi|319764815|ref|YP_004128752.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MLANALQGVRVIDLSRILAGPWCTQNLADLGADVLKIERPVQGDDTRGWGPPFATAGSGEKVAAYFLSCN
RGKQSVTADFADAADRDWLLRQVRDADVLVENYKVGTLAKYGLDYASLAAINPGLIYLSVTGFGQSGPFA
HKPGYDYIFQGMGGLMSYTGIADGEPGAGPLRTGVAVVDLMTGMYATSAVLAALVQRARTGRGQHLDIAL
LDVAVAMNANQASNYLVSGESPARIGNTHPNLAPYEVFACADGHVILAIGNDTQFVAFCRLMGADWHLQP
DFATNAGRLTHLKRLRPLLREKLAAWRVEALGRALDEHGISWGNVNDMEQVFAHPQVRHRQMLQTVDHPQ
LGTLRLVRNPMVPAGRDAPVTPPPVLGPAARPRTHQPVNQET
>gi|319764816|ref|YP_004128753.1| thiolase [Alicycliphilus denitrificans BC]
MNTHASRGSIAILGTGLAGMGHAGGATEQEIIARASCLAIERSGLAKSDIDGIITSSLTSPWWVMRMAEY
LGIRPRFSDSTMFGGSAFIADLKIAQMAIDAGECENVLICYGATPRSAPSSSRINQMRAELDPQPYEHPY
KAFNPVSSYALAAARHMYEYGTTRRQLAEVAVAARKWAQLNPDAFSKKPLGVDDVLNARMISDPFTALDC
CLVTDGAGAIVVTSARRAKALHARPIYVLGSGFAHWHRQISCMEDLTVTPAVESGRKAFAQAGLQPRDID
VVELYDAFTINPILFLEDLGFCRKGEGGAFVEGGRIEPGGAFPMNTNGGGLSCVHPGMYSIFLIIEAVTQ
LRGEGMARQVAGAETALVHGNGGVLSSEATAILSSQL
>gi|319764817|ref|YP_004128754.1| hypothetical protein Alide_4165 [Alicycliphilus denitrificans BC]
MTDIGAPQSAVASACDQRYFGALAEGRFEIPRCLSCGRFHFYPRVCCPHCGSQDLEWVAPSGNGTVYSVT
IVRRAEGDYTVVLVDLEEGPRLMSRVVGMPVEQVRIGLPVRTRIDAMADGPLLVFTARGEVRT
>gi|319764818|ref|YP_004128755.1| extra-cytoplasmic solute receptor [Alicycliphilus denitrificans BC]
MDFTLFHRARSMARAAALCGLALAASAMPAHAQGGAYPAKPVTVVVAFPPGGMTDIVSRALAKELQERLK
QPFVVENRPGGAGQVGTEYVARQSADGYTLLVGATGYVIAPAMKKVGYDPLKSLEPVAVLARAPNLIVVN
PGVPAKNAQEFLAWAKKQPNIPFGTAGAAGSTHLGGEWLRKVTGYQFTHVPYKGAAPATNDAVAGQIPMA
VQDSMSVSAFITSGRLRPIANLAAERSKLFPELPTLREAGAQFKDFDVYTWLGLYAPAGTPAPVLALLNG
EINRIMNSPEMTERLRLQYSEPLGVKDLAQTRSFVAAEVAKWKRVVLETGVSAEE
>gi|319764819|ref|YP_004128756.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MRYELSDLRLFLEIAQARSLTAGAAAVFITPSAASYRLKNLEQALGTALFERTPRGMDLTPAGDAMLLHV
RELFEGVERMQSDVGRFISGVKGHVRLIANSSSLNGFVTPTLGRFLVAYPGIDAEIEERQSETIPAAVLA
READVGIFAGPSSVQGLATHPYAVDRLVIVTPRDHVLASQSSLCLGAALEFDFVCMARTSSNYLFLRDTA
QKYGKTVRARLHAHGFDAVLSLVAAGVGIALMPRSVLGGRLQPDQVAVLPLDEPWALRELSLVVRQDARF
PGFITEFVNFLLEDPQVAMTRA
>gi|319764820|ref|YP_004128757.1| 4-diphosphocytidyl-2c-methyl-d-erythritol synthase [Alicycliphilus denitrificans BC]
MHYSAAMHTQPPALLLAAGRGERMRPLTDHTPKPLLQVQGRPLLEWHLQALADAGVARVVVNTAWLGEQI
SSHFGPRPLLGGREQLSISYSHEGRDFGRALETAGGIARALPLLGGAVFWLAAGDVFAPDFRFDPEAARR
FAAGGALAHLWLVENPPHHPRGDFGLSPQGLVLNLPEGDARERFTYSTIALLRVELFAAPWCDIPAGNPE
GLAAPLAPLLRRAMDAGRVTGELYRGRWTDVGTPGRLAALNATAPSQG
>gi|319764821|ref|YP_004128758.1| transketolase [Alicycliphilus denitrificans BC]
MANAQQMANAIRALAMDAVQQANSGHPGAPMGMADMAVALWGRHLKHNPTNPQWMDRDRFVLSNGHASML
LYALLHLTGYDLPLQELKNFRQLHSKTAGHPEHGITPGVETTTGPLGQGVTNAVGFALAEKLLAAEFNRE
GHAIVDHHTYVFLGDGCLMEGISHEAVGLAGAWKLNKLIALYDDNGISIDGQVAPWFIDNTPQRFAACGW
NVIDAVDGHDVEAVAAAIGQAKASVDKPTLIVCKTAIGKGSPNRANTAKAHGEPLGAEEINLTRAALGWS
HEPFAIPESVYADWDAKAAGQAAEAEWTLRFAAYEAAYPELAFELSRRMAGDLPKHFAQVAVDTVVAAHT
AGQTVASRKASQIALEAFTAALPELLGGSADLTGSNLTNTKSTPALRMEASGAVARTEDGQVGRHINYGV
REFGMAAIMNGIALHGGFIPYGGTFLTFSDYSRNAIRMAALMKQRVIHVFTHDSIGLGEDGPTHQSIEHA
ASLRLIPGLDVWRPADTAETAVAWSVALSNRDKPTALLLSRQNLPYAPKKDLGDISRGAYILSEPKDIGL
KKKAQAVIIATGSEVQLALAAQKLLAVRKIAVRVVSMPSTTAFDREDVKYKQLVLPAGLPRIAVEMGVTD
GWWKYGCAAVVGIDTYGESAPAGVLFKHFGFTAENVADTVRAALQRKR
>gi|319764822|ref|YP_004128759.1| glyceraldehyde-3-phosphate dehydrogenase, type i [Alicycliphilus denitrificans BC]
MTIKIGINGFGRIGRNVLRSAVQNFSDIEVVGINDLLEPDYLAYMLKYDSVHGRFKGEVAVDGNTLIVNG
KKIRLTQERDPANLKWNEVGADIVIESTGLFLDKASAEKHIAAGAKKVLMSAPSKDDTPMFVFGVNHKTY
DGQAIISNASCTTNCLAPVAKVLHDKWGIKRGLMTTVHAATATQKTVDGPSNKDWRGGRGILENIIPSST
GAAKAVGVVIPSLNKKLTGMSFRVPTSDVSVVDLTVELEKEASYDEIKAEMKAQSQGALKGVLAYTEDKV
VATDFVGETHTSVFDADAGIALDKTFVKVVAWYDNEWGYSNKCLEMVRVMAGK
>gi|319764823|ref|YP_004128760.1| ribosomal subunit interface protein, putative [Alicycliphilus denitrificans BC]
MQIQVHTNDHIQGGESLVRWVQEEATTRLARFREHVTRVEVFLSDVDGGKSGAVDKRCVIEARPAGRQPV
AAHAEAPKVADAFAAAADKLLRSLGDDIARAKDRQGRETIRTAE
>gi|319764824|ref|YP_004128761.1| peptidase c26 [Alicycliphilus denitrificans BC]
MSALHPTASRLKIGLSACFSHADPGRSLFTNKTLQYVEQSIAHWIMSAGALVVMVPCPTGETARGDVTLK
HYAEWLDGVVMHGGSDVWPGSYGEVPLKDAWLGDRVRDLYDLAVVEAFEQQGKPIFGVCRGLQLINVAFG
GTLYQDIETQHPGAMQHRNATAYDQHFHEVDIVPGTRLARLYPGQPRVTVNSIHHQGIKNLAPGFDIEAW
SYPDAVPEAIRRRHGHGHGRGYIAATQWHPEFRAASGAMLDDTPLLHDFLAACADARARPRPGHSPLHIR
DRAERLLRRALLRQR
>gi|319764825|ref|YP_004128762.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MDLTRLQYFVAVAEAGSLSRAAAALSMSQPALSRQVLLLEEELGQRMFDRTGRGVVLTPSGEALLAHARA
VFARWEEARADMLDRQRSPRGRVTVGLPPRVAHVLTADLVQQFLARFPEASITVEEGLSVRLRESLVAGR
VDLAVLFDPPHSPQLLLETLLREPVVLISTAPVPSKIRLAAVARRGLVMPSGPHSLRQLLESHTRPRNMA
LKVVAEVDSVQTVLSLVARGVGDTVLPQSAVRSWPYAEQVHVAAVVAPSMRNRLVLAIPRARPATLLSRN
AAQILRELLARHFG
>gi|319764826|ref|YP_004128763.1| amidohydrolase 2 [Alicycliphilus denitrificans BC]
MSHPATTVVQTYDPTPSTPRLRLPPGACDSHVHVFGPAAEFAFAPQRSFTPADAGKATLFALHRQLGISR
CVIVQSACHGFDNAVVEDAIAAGGGNYLGVALVPHTVDSRELRRLAGAGMRGVRFNFMKHLASTASVDDV
LALTPHLADAGMHLQVHFESSLVHTLGPRLAKSAVPVVIDHMGRVDATLGAGHPDFAALERLLDNPLFHV
KVSGIDRIDATPPYAHGIRLARRLLERAPERCLWGTDWPHPNHTHVPDDGRLVDALAGIAPTPSVLQALL
VDNPERLYRFSQGISG
>gi|319764827|ref|YP_004128764.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MPFDATTPCNPHGRLAGKTAFVTGAGSVGAGWGNGRAIAVRFAQEGARVFGVDRDPARLQETAELIRGCG
GTFIAGACDVTQGSSVADAIARCVDALGRLDVLVNNVGGSAKGGPVEMSEEVWDAQVDYNLKSVFLTCKH
ALPHMLAQGGGAIVNLSSTSGIRWTGSAQVAYAATKAGVIQLSRVLAVQYAKQGIRVNTVVPGQLHTPMV
EARLAGQRAGGDVQALLQERQSRIPLPFMGDGRDTANAALYLASDEARFVTGTEIIVDGGMSVRCD
>gi|319764828|ref|YP_004128765.1| hypothetical protein Alide_4176 [Alicycliphilus denitrificans BC]
MRTFSRTRRAIALALTGLALGSAAMAQPKVVRLIVAFPPGGPVDFVARTISDALGKELGSNVIIENKPGA
NGAIAADFVSRSAPDAQTLWLTSVGAVAINPSLYPKLSYDPLRDLTPVSLVVNNVEILVVNAKAPYNTGA
EFVAAARTAGQPLTMASSGTGSVPHLAMELLNESAKIKLSHIPYKGAAPAITDVIAGHVNGFFGDIPGLV
GHIAAGKLKPIGVAAPKRHPRFPDVKTFAEMGFPGVDSDNWYALFAAKGTPAAEAERVSKAVHRALAHPE
VKSRLEASGAEVAGSSPAQLSQLLQQDITKWGRVVRANQITPD
>gi|319764829|ref|YP_004128766.1| carboxymuconolactone decarboxylase [Alicycliphilus denitrificans BC]
MRIEPVTPGTRPELAEQEARIMAERGRISPLYQVLLNSPPIAHGWEQMLSAVRNRSSLPAGLRELVILRV
AVLNGAPYEFDAHVPHALKGGCSQQAIDATREQPLPATDAWSTRERLALELTDAMTRDIVVPDALFARIR
QHFDAQGQVDLVATIGAYNMVSRFLTAFHIGHA
>gi|319764830|ref|YP_004128767.1| hypothetical protein Alide_4178 [Alicycliphilus denitrificans BC]
MSHHAPNAATAPTDFLLAQLVWPAAAGGPRDVMARAGAAISRLPPGAPALRLVRGARAVQPPTIYLYYAL
DQRASLAPQDAWPLEQALAAAFSGEAVQVAVSRLEKVFERAGHSSGQACAAHYVVEMDPQEGWMPEISAW
YDQEHMPGLAAVPGCAHAQRMLNHDHGPLSLACYDLVTEAALNSPPWLAVRATAWSDIARPHFTNTKRTM
FQRLPDAPPDRGRCMQACAAVFSKIGM
>gi|319764831|ref|YP_004128768.1| pepsy-associated tm helix domain-containing protein [Alicycliphilus denitrificans BC]
MRAFWTVVHRWAGLAVALFLIVAGLSGAVISWDHEIDEWLNADIMRTPGRGPLQDPLRLAAAVEADDPRV
EVSYMTLGLEEGHAASFLVRPRTDPATGARYALDYNTVYVDPVTARITGHRASRSIALSRRNLMPWLRHL
HESLHMPAFRGTDRWGVWLMGGVALVWLVDSFVALYLTFPPRQGRRSARTWASRWRPSWAVRWRAGGYRL
NFDLHRAGGLWVWGVIIVVSFTSFSLNLYREVFYPVMSKISTTTPGPYETLKPAPMGTFIAPRIGFAEAI
AIARREGERLGFAHPPGGIWYGGDFPFYNVSFFDPSDESGAMGMGLSNVYVSSGTGEVLGTHRPWHGTAA
DVFVQLQLPLHSGRILGLAGRILMSFMGLVVAMLSVTGIVIWARKHRARTLQKK
>gi|319764832|ref|YP_004128769.1| tonb-dependent siderophore receptor [Alicycliphilus denitrificans BC]
MYPNIIRFPLLPAAAAVGLALAADAAGAQAQATDSAPSLATVTVEASADASAQGLAKPYAGGQVARGARV
GVLGTQDMMDTPFSATSYTSELIQDQQAKSVGDVLLNDAGVRQARGFGNFQQTYFVRGFTLYSDDVAYNG
LYGLVPRQYMATEFVERVEVFRGANAFLSGSGAGSVSGGGLGGLINVVPKRASNEPLSRVAVGVASGGQL
YAATDLSRRFGPDSATGVRLNLARRSGDTGVDNEDTRTTVGSLGLDWRSSRTRLSADLGWQEHKLSAPRP
AVTPTASLPMPAVPDAKANYAQPWTYSNSRDLFGTVRGEFDFSDQWTGWAALGMRRGKEDNSLSGLTLSS
GTGNATLNRFDNTRENHIKTGELGVRGKFETGAVKHTAVASLTAFDSSERNAWGYNYATGQTNNIYHPVA
LTPPALTGFGGTLGSPRETERIKTGSLALADTMAFLDERLLVTLGLRHQTIKVDGFDATTGASSGSYDKS
RVTPVGGIVFKLRPEVSVYANYIEGLAKGGSAPVVSGGQPVANAGEVFAPYVTRQKEVGLKYDGGHIGAS
AAFFTTDMPSAYVVGNVYGVFGKQRNRGLEFNVFGEPAKGLRVLGGLTLLDAKYLTTAGGAFDGNRVVGV
PRSQANLGAEWDVPGVSGLALNARVLYTGAQYANAANTLRAPGWTRLDLGARYLLDVGGRLVTLNARVDN
VVNRGYWASVGGYTTYGYLVQGAPRTFSLMASVDF
>gi|319764833|ref|YP_004128770.1| peptidylprolyl isomerase, fkbp-type [Alicycliphilus denitrificans BC]
MHIAKDTAVTISYKITDPATGKPLDSGHVAYLHGGYENIFPKVEAALEGQAAGHAATVDLAVEDAFGPRD
ESLVRTIPKSEFPPGVKVGGQLQGPGADGRPQMFHVVKIKGPVVHLDGNHPLAGHALRFACKVTEVRAAT
SEEIAHRHVHGGHGHHH
>gi|319764834|ref|YP_004128771.1| hypothetical protein Alide_4182 [Alicycliphilus denitrificans BC]
MTFRILRTLAALALWACAALAHAQSYPAKPVRIIVPYPAGGTTDIIARIAAAQLAERLRQPFVVENRAGA
SGAIGAVAVAQSAPDGYTLVMGTASSHGINSALQKNLPYDAVKDFAPVTVVASTPNIVVVHPSVPAKTLG
ELLALAKAQPGKINFGSTSPGGSPHMSAELLKMMAGVDMAHVPYKGAAPMLTDLIGGQIQAGFDNLPSTI
GFVRGGKVRALAVTTPQRWPGAPDIPTVAESGVPGYEVSGWFGLLAPAGTPKSVLDTLQSAVALAVQQPE
VARQLRDLGAEPVANKPEAFARDIAADVEKWRKVVQATGVRLE
>gi|319764835|ref|YP_004128772.1| hypothetical protein Alide_4183 [Alicycliphilus denitrificans BC]
MKARLEQVAHTRSGDKGNTSNIAVFAYEPALYPLLKEQLTAERFKAFHREAITGEVLRYEAQNLHALNFV
AHGALGGGVSRSLSLDNYGKALSAAILGFELDVPEELAPLLRSRAPA
>gi|319764836|ref|YP_004128773.1| hypothetical protein Alide_4184 [Alicycliphilus denitrificans BC]
MSENKLLRIGSGAAWWGDRVEPAQLNAEHGDLDYLCFETMAEATVSAAQVRARRDPGFPGYDTYLDDRMR
AVLPACMRRGTRIVSNQGWINPQGAARRIVELLRELGIRGVKVAAVGGSLITDRVLELAPTILENGQPTA
TLKDTLISAEAYMGAEPIVQALREGAQIVVTGRVADPSLFLAPMVYEFGWDPLDHEKIGAGSGIGHLLEC
GAQVTGGYFADPGLKDVPEPWNLAFPIAEVDAQGNVTLTKVAGTGGAITAQTVKEQMLYEVHDPANYITP
DVVVDFTRARIEPLGPDRVRVTGLAGKPRTPTLKVSMGCTEGFIGEDMFFYAGPGALRRAQLAKKILEER
FRIVQLDAEEVRIDFLGLNAIHGAATPPDAPEPYEVAVRVAARTRTREEAVKVGREVDGMAVSGVGHTGK
RVPHQERTREVIGVWSSLVPRGQVAAHIDHFTS
>gi|319764837|ref|YP_004128774.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MDKFGELQVFLRVVEEGSFSGAGRRLHLSPSTISKLIARMEARLGVRLFERVAGAIRLTQEGERFRAAGE
QVVQAMEEAEAGVRVADAEVSGTVRIHTALTTAKYLVAPRLPRLLDRHPRLHLDFVLGTERGDFIRQGLD
VAIHSGRPTEQTLIGRPLMARPWVIAAAPQYLARHGTPQRPEDLLRHRCLNFTIRTQWNRWTFHDEGGLK
TIDIPNYIGANQGELLRTFALLGLGVVRLARFHIAGDLESGELVPLLTQYQERTEDDRFYLLYPRGRSLA
PRVRAVVDFLAQEFGA
>gi|319764838|ref|YP_004128775.1| transcription activator effector binding protein [Alicycliphilus denitrificans BC]
MIETPQIIDISPPRTTAVIRVCCPREELPCTMGRGVRELLDRIKAQGAQAMGPLFTHHLRGPTDSFDCEV
GVAVDRPVRPAGHVCPGQWPAMRVARTLYRGHYEDLPQAWAALRAWIAAQGLAATGEMWECYITGPEIGS
DASAWRTELYLPLCGKGV
>gi|319764839|ref|YP_004128776.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MAAQRLQKRDSSHYPYHAMNQTPPAAPHCLTAAPPEPVVVITGASSGIGHATALAFARRGARVVLAARNA
DTLAPVALACHAEGGRALGIPTDVTDAEAVQALADKAVRHFGRIDIWVNAVGVGAVGRFEGVPIEAHRRV
IEANLLGHLHGAHAALTRFRDQGHGLLVNLISLGGWLPTPYAAAYAASKFGLRGLSESLRAEVADLPRVH
VCDVAPTVVDTPGLSHGANYTGRRLRAPLPMVDPRAVAQAIVDLADSPQPRAVTWLGLGALPGRLAHALA
PQGTARALRWLGDRGLRHAAPAPLTEGNLFSPSRQTAIDGGQRQRMAGAAGLVALLGAVGLAAGWWLGRR
R
>gi|319764840|ref|YP_004128777.1| hypothetical protein Alide_4188 [Alicycliphilus denitrificans BC]
MQPVARGGAGISTMGRFEKHTTMHRRLLLTHTAAGALALLAGCASAQSGYTISTQQMQQALAERFPRSYP
LGGLLDLQLQAPRLVLLPERDQVNAVFDLAATGALLARRHTGVFDVDFALRYEPTDRSIRAYRLHVNALR
LDGLKPQASELLQRYGQQLAEQSLREVVLHQLRDKDLAPIAAMGLQPESISVTPRGLLVRFGPKPLS
>gi|319764841|ref|YP_004128778.1| dtw domain containing protein [Alicycliphilus denitrificans BC]
MPHAVSQLRAERLARSAKPFLARGGSRRAHCPGCRLVPSHCICALRPLCGTRAGVCLLMHDIEPLKPSNT
GWLIADVVADTFAFGWARTEADPALLALLADPRWQPYVVFPGEFVDPARVVHTLAPQAAAGEGGAPAAGR
RPLFVLLDATWPEARKMFRKSPYLERLPVLSLHGDAASRYRLRRSTRDDHFCTSEVAAQCLALAGDARAG
ALLQAWLDLFSERYLQAREQRPADADSAAHRQLRALRS
>gi|319764842|ref|YP_004128779.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MPPSARPKAVVNHSPGSSTSTVERAMRVLRVMSEGGNARLTDIAAAADLDKATALRLLEVMVRDGFVMRN
ARSKQFSLGPELMVLGAAALRRFDPRPLARPSLLRLVGRFEDSVVLSIPSGVESLCIDVEEGTYPIRANY
LRVGSRRPLGAGAGSLALLAWMPEAEREAALDILASQMGRYPRITPALLRERIANARERGYVVLLDVVVE
RMGGIAVPILDPEGRPVAALSIAALNERILTREAALAQALQHESTVCQVRWAEAQQHRAAPRPPAKETHP
>gi|319764843|ref|YP_004128780.1| thiolase [Alicycliphilus denitrificans BC]
MIHSPTAWLRGAGGTPFGRHEGRGPIDLMADAARQALASSALARGDIDGMLCGYATTLPHLMLSTLLCER
LGLSPRYAHGMQLGGATGAAMLMAARELVRAGRCRNVLVVAGENRLTGQSRDSSIQTLAQVGDADYEVPN
GASVPAYYALMASEYMHRTGITRADLAEFAVLMRANAARHPEAHLRTPITQAEVLASKPIAAPLSLLDCC
PISDGAMALVVSAEPGPHAPVRMAGAGQAHRHQHLTAMADVMQCGAGEAAAQAFAEAGLTHADIGYLGIY
DSFTITLAMLLEETGFAPRAGAAARARAGDFAPTGALPLNTHGGLLSFGHCGVAGGMAHAVEAWRQMTGQ
AGERQIRAPRRAFVHADGGVMSSHVSLILSRED
>gi|319764844|ref|YP_004128781.1| hypothetical protein Alide_4192 [Alicycliphilus denitrificans BC]
MLAAPFNDGLRVGVVRYQRCAACGHAQTLARHACQRCGREDLRWHDAAGTATVRAATVVARAPSDDFRPL
APYTLVIVELDEGPRLMGHAAPGVQIGQGVRAGFFEHQGRTLLRFTPID
>gi|319764845|ref|YP_004128782.1| hypothetical protein Alide_4193 [Alicycliphilus denitrificans BC]
MHPIPSRRRWIGLACAALCAAPLAWASGYPDKPVKLVVPYPPGGPTDIVARVVAQKLQEQMGQPFVVDNR
PGAGANIGAEAVARSTPDGYTLVVATTAHAINPSLFARLNYSITKDFAPVSQLTSGPLVIVTSPATPVSN
VKELIALAKSKPGGLNYASSGNGQSTHLSAELFSAMAGVKMAHVPYKGSAPALTDVMGGQADLMFDTMLS
SMPHVKAGKLKALAVTSGQRSPSAPDIPTVAESGLPGYEAIAWNGLLAPAGTPPEVVNRLSAELKKVLEN
PEVRQRFEAQGFSATWNTPAAYASFLQAEVDKWDKVVKTSGAKID
>gi|319764846|ref|YP_004128783.1| CoA-binding domain protein [Alicycliphilus denitrificans BC]
MQDLLASALDPRSVAIIGASENIHKIGGRPIYYMQRHGYRGTVYPINPAREEIQGHRSYASLAALPEVPD
LAVIALGGDKTVAAVEECAARGVKGAVVIASGFGETGPAGRELQDHMVARARAAGMRLYGPNTQGLANFG
TGAIAGFSTMFIEVPPMDGPVGIVSQSGGMSSVAYGLVRGRGLGVRHVHATGNEADVTVAEMAWAVAHDP
GVKLLLLYLESIAQPEMLAATAAYARERDLPIVAVKAGRTAGGQKAASSHTGALANEDRTVDAFLRHHGI
WRVRDPHEQARAAHAYLKGWRPEGRRLVVISNSGASCVMGADAADDAGLALAPLSEATQAAVASKLPGFA
TASNPIDVTAALLSNSGLFGDVLPAVAQDPAADLFFINIPVAGAGYDVERFARDAAAFEAAAGKPVAVAA
WQEGVAAPFRAHGIATFPNEGEAIAVLAQVAGHTALMRAPRTAWPALPDVQVPAGAQGFLNEVDSLGLLA
RHGVPTVPMHLCRTADEARAAFDAVGAPAVVKACSAEVPHKSEHGLVALNVQTREQAAELFERFWARMDA
MGVQRDGVIVAATHKARREFMVGARIDPVFGPVVVVGDGGKYVEALKDCAVLLPPFSEEQVQAALRTLRI
APLLGGVRGEPPLDVQALSRIAVAVGQVVAGARGAIASLDLNPVMVGAAGEGAVVVDALVEVSKP
>gi|319764847|ref|YP_004128784.1| glutathione s-transferase domain protein [Alicycliphilus denitrificans BC]
MALTHPITAKWPARHPDRLQLYSLPTPNGVKVSIALEEMQLPYEAHLVSFESNDQFSPEFLSLNPNNKIP
AILDPHGPGGKPLALFESGAILVYLAEKTGQLLPQDAAARYETLQWLMWQMGGVGPMFGQLGFFHKFAGK
EYEDKRPLGRYVAESRRLLGVLEQRLAGRDWIMGADYTIADIAVFPWVRNLVGFYGAGELVGFDAFPNVQ
RALAAFVARPAVQRGLEIPARG
>gi|319764848|ref|YP_004128785.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MLLSEQWVLVTGGARGLGQAITRALAREGAGVVVNYHRSEAAALALAEELGPRAIALQADVTDAAAVQSL
FAAARERTGAGISAVVNNALAQFSFDGDARPRLGDIAWERFSQQIEGAVKGALNTMQAALPGMRAQGFGR
IVNVGTNLFQNPVVPYHDYTAAKAALLSLTRTAANDLGPDGITVNMVSGGLLRTTDASSATPEAVFDLIA
SLTPLRRVTTPAEFADAVLFFLSPWARAVTGQNLVVDSGLVKD
>gi|319764849|ref|YP_004128786.1| glyoxalase/bleomycin resistance protein/dioxygenase [Alicycliphilus denitrificans BC]
MFSHVMLGASDLDKSKQFYDAFLGALGCKPGFTDPKNRTFWRHAGNTFAISAPINGEPACHGNGSTTGFA
AQSPEQVDAAHAAGLAAGGVTCEDPPGWRAGASGGPLYLAYLRDPAGNKLCLLHRPPKEAKPA
>gi|319764850|ref|YP_004128787.1| DNA topoisomerase iii [Alicycliphilus denitrificans BC]
MTKTLVIAEKPSVAQDIVRALTPVAGKFDKHEDHFENDRYVVTSAVGHLVEIQAPEEFDVKRGKWSFAHL
PVIPPYFDLKPVDKTKSRLAAVVRQAKRKDVTELVNACDAGREGELIFRLIEQYAGGAKGGLGKPVKRLW
LQSMTPQAIRDGFEHLRSDAQMQGLASAARSRSEADWLVGINGTRAMTAFNSRDGGFFLTTVGRVQTPTL
SLVVEREEKIRKFVSRDYWEIHAGFQAEAGQYLGKWFDPKWKKSEDPEARADRVWSLKEAEAIAHAVRGK
AATVTEESKPTTQASPLLFDLTSLQREANGKFGFSAKTTLALAQSLYERHKALTYPRTDSRALPEDYLPV
AKNTFAMLAGSGMRHLAPYAQQALDDGYVRPSRRIFDNAKVSDHFAIIPTTQAPHGLSEAEQKLYDLVVR
RFMAVFFPSAEYLVTTRISQVVGHSFKTEGKVLVKPGWLAIYGKEAASEVEGGKEGDKGQPLVPVKPGEM
THTEFAEAKGLKTKPPARYSEATLLGAMESAGKQIDDEELRSAMQEKGLGTPATRAAIIEGLLTEKYMLR
EGRELIPTAKAFQLMTLLRGLQVEELCRAELTGEWEYKLAQMEKGQLSREAFMQQIQAMTEKLVRKAKEY
DRDTIPGDYATLATPCPNCGGVVKENYRRYACTGAGGSGEGCGFSFGKSPAGRTFETAEAEQLLRERRIG
PLEGFRSKAGWPFTAEVTIARDEEAGNYKLEFDFGDDKNAEESGEIVDFAGQESLGRCPVCGAPVYEHGG
NYVCAKAVPTAQQPVPSCSFKSGKVILQQPVERAQMHKLLATGKTDLLDKFVSMRTRRPFKAFLAWDAAA
GKVNFEFEQRESKYPPRKTAAAAKTGAASARGTGAAGPKTSKPAAKKTAAAKTPRKTGAAGKTPSAQLAA
VIGAEPVARPEAVKKMWDYIKAHNLQDPKDKRTIVADDKLRAVFGKDSIGMFELAGVLGRHLA
>gi|319764851|ref|YP_004128788.1| nuclear protein set [Alicycliphilus denitrificans BC]
MPGTTSSAVPTPAPGRRIQTRRSGVHGKGVFALQPIAAGEVVIEYTGEVISWKEALRRHPHDPAQPNHTF
YFHVDEDRVIDAKFGGNSARWINHSCNPNCYADERHGRIFITALRNIEAGEELNYDYGLIIDERYTPKLK
AEYPCWCGSRNCRGTLLAPKRGWAPPGPPEQPKAPKARRSAQR
>gi|319764852|ref|YP_004128789.1| biotin/acetyl-CoA-carboxylase ligase [Alicycliphilus denitrificans BC]
MSPAPTPARWPAEAIWQAVAPLLPGFTVEVLPSIDSTSTELMRRARNGRLEPTLLVAEEQTAGRGRLGRQ
WHTGAYEGTGMVPALTFSLGLPLAPREWAGLSLAVGVSVAESLQPALPGADGGQPRILLKWPNDLWLQDG
RKLGGILVETASLAGAPSEPRYVVIGIGLNVLPVLTQGLSTPPACLREVDSTLTAASALQRIALPLVQTL
LGFAEHGFAPFQARFAQRDLLAGRGVTLSDGTQGTAHGVAEDGALLVHTARGMQAITSAEISVKPQ
>gi|319764853|ref|YP_004128790.1| sporulation domain-containing protein [Alicycliphilus denitrificans BC]
MLRLAAIVLLLANAGYYAWSQGLLQGWGLGPASESEPQRLEQQIEPQNLRLLPPGGQGPASAQPARAAAT
TPDEPPACLQAGMFDARQAEALRQAAAQLPAGSWSLEPVQAAGRWMVYLGRFPDEEAVARKRAELRALKV
DYDRPGAALEPGLSLGRYSTEEGAQRALGQLAGQGVRKARVVQERSDTPGYTLRLPAVSGAQRAHIDATL
QPALAGKALRPCG
>gi|319764854|ref|YP_004128791.1| alcohol dehydrogenase zinc-binding domain protein [Alicycliphilus denitrificans BC]
MKAAFITAHGGNEAVQVCAHSLPARTPGEVRVRVQAATLNQVDLYMRNSGAGITHRLPQIMGLDAAGTVE
DCDDADPLLRPGQEVVIHPGVACGRCEFCQRGDSALCTRIQFLGEHRDGTFAQWIQVPAAQVFPKPAHLG
WAEAAALGVNHLTAWRMLFSKARLQPWETVLVFGIGGGVSLAALQLAKAIGARVIVTSRDDAKLERARAL
GADHGINGKTQDVAKEVMALTGGRGVDVVFENVGAAAWPSAMKSLVRGGRLVTCGATTGDQPGADLRRIF
VRQLQIFGSSLGTHGEFHDLLGFVGRTGLRPVIDSEFPLDEVHGALDRLESGAQFGKIALRIDGH
>gi|319764855|ref|YP_004128792.1| maoc domain protein dehydratase [Alicycliphilus denitrificans BC]
MQPLDFDAIAVGDALPGIVEGPVTRHALGLYAGASGDYNPLHIDQDYARREAGMPDVFAHGMLSAAYLAR
VLTRWVDPTAIRRLSVRFVAITHVGDEVHCRATVAGRFLDGGTPCVRLDLRVHNQVGEPRLRGTAVVAVR
RSPSSMYEDRT
>gi|319764856|ref|YP_004128793.1| hypothetical protein Alide_4204 [Alicycliphilus denitrificans BC]
MWDLSLQGAALTPFSAEVERGRLRAFARATGQEHPLFLDESAARAAGHPALLVPPTFLFCLSMEGPNPQE
IYERLGVNYAHVLHGEQHFEYHRPAFAGQMLHFAPRIGRLYAKKGGALSFFEWENRVTDGDGRAVAELRS
VMVERTPRQEGAHAAA
>gi|319764857|ref|YP_004128794.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MPLRTRHIALLLGLAGLASFGAQAQEKIRIGFLTDMSSAYADLDGKNGAMAIQMAIDDFGGKVNGLPVEL
ISADHQNKADIAASKAREWMDTQNISMLVGGTNSAAALAMAKLAQEKKRVFIANGPGTSALTNEQCSPYT
IHYAWDTTALAKGTAGALLKQGYKNWFFLAADYAFGEALQRDATNVIKAHGGQVIGGVKHPLGAADFSSF
LLQAQNSKAQILGIANGGSDMINALKASREFGIGKNMKVASLMLFLVDVHSMGLKNAEGLLFTTSWDWNL
NDESRQFGRRFFEKAKRMPTDVQAANYSATMQWLKAVQALKTTDADKVMDWFKKTPLKDFYAQGRVRPDG
RYVHDMYLMQVKAPAESTMPWDYVKVVATMPGEEVFTTKAESRCALWK
>gi|319764858|ref|YP_004128795.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MHVDTPNPSPDAVWRPDRGTVENANLTRFMRALGVDGFEQLNERAGADPGWFHDALIRFLDYRFEQPYEK
VLDLGEGLPFARWCVGGTTNVVLNCIDRWRGTARYTRTALVWEGEDGAVQAWSLADLDREACRLGWGLRR
LGLGRGDVVGMYLPNLPQAAVAMLAVAKIGGIVLPMFSGFGADAIAQRLGDGQAKALITVDGSLRRGKPV
GAKAVADEALPQCPGVRHVVVLDHLATGHGWREGRDHWWHELVAGAPDDCAAVPTEAMPADAPFLLMFTS
GTTGKPKGVVHSHCGFPVKTALDLSICMDLKPEDRFLWMSDMGWLVGPILVFGGLLVGSTVVLAEGAPNY
PQPDRLWRLIERHRVSYLGLAPTVARLSMSIADDALGALDLASLRVIVSTGEPWTPEAWRWTFERVGRCR
VPLLNYSGGTEVGGILTGTVIHPLKPCAFAGPVPGTGADVVDAEGASAGPGVMGELVMRSPSIGLTRGLW
HDRERYLQSYWSRLPGMWVHGDFASRDADGMWYVHGRSDDTLKIAGKRTGPSEIEALLMDTGLLQDAAAI
GVPDPVKGTAVVCLCVPRSGIEKAGAAEALSAAVAAGLGGAFRPARVVFVDDLPRTRNMKTMRRVIRAAW
LGDDPGDLSTLVNPESVQAIRAALAAQGPA
>gi|319764859|ref|YP_004128796.1| regulatory protein marr [Alicycliphilus denitrificans BC]
MVFPMQKENNSRMDLANRVFFRLYQCANMLHKTGTRALESDGLTTQQWAVLGALSRPQAAEGMSVGELAR
YLMVSRQNLSGLLSRMERDGHVSLAADPRDRRSRLASMTEAGRHVWLVGAQPKILAYYEDALEGFSVNDI
AHSLHYLLKLLENMQRIDKTQGGGREAE
>gi|319764860|ref|YP_004128797.1| hypothetical protein Alide_4208 [Alicycliphilus denitrificans BC]
MEHRALKPQSAEVLAKATARSAALLGLSGAALARTIGLSEATVSRIVNSGKPIRPDSKEGELSLLLVRVF
RSLDALVGNDDRKRLAWMNSHNDALGGKPLVLVQKAEGLVATLNYLDGMRAPI
>gi|319764861|ref|YP_004128798.1| res domain protein [Alicycliphilus denitrificans BC]
MAWAVSWFDGSVADRSMLAWRGVEAQHVVATMRLADTPREQELLEDLLEASKPGLPPGARGAHYLLATPF
RYFPHHPSRFRPAGAKGQWYGAETVHAACAEVAYWRNRFIRDSAGLRNEALLTQHSFFQAAVGGRAVDLT
QPPWAQAQADWTRGTDYRQTQAVAAAAQDRGVQWLRYASVRAPGAACAVVFDPASLREPPGGLDATLQTW
FCKATRECVMFTRRQQSYLWDF
>gi|319764862|ref|YP_004128799.1| nad/nadp octopine/nopaline dehydrogenase [Alicycliphilus denitrificans BC]
MTRQDIHVGVAGVGGIGLANAAWLRQAGFGVSLWSPRGTGLAGPARCELHATGVLGGSFEVQVAASAAEL
SRHADVLVIAVPVNGHKAVFDALAPHLRTGQTVVVSSMSSLSALYAYELARSRGVDITVVSMGTTTLTAR
RAASNEVKVMTRRTRLGISALPQSALPRAKALCQALFGDVFDEDANALASALTNINPVAHAPLAVFNWTR
IERAENWPQYHYMTPHVASVIVRLDAERRALARAFGLHVRSIEEHFAKSFNTRSEQLADIAAELHASRGG
PPGPIDVGTRFLGEDVPYGLAFSSVLARIAGMPMPCTETMIEASSLITGRDLRAENDLIDALGLRSETPD
GLLERLR
>gi|319764863|ref|YP_004128800.1| hypothetical protein Alide_4211 [Alicycliphilus denitrificans BC]
MAQNGALAFQTVMTMKKTIASVFATLSVMAAGAIPAAHAQAPDLPAKPIHIVVPFTPGGAQDIIGRAIGT
KLAERIGLPVIVDNKPGAGGVIAAESVAKAAPDGTTLFLASGGAISIAPSLLGGKLTYDPARDFAPIAML
VDTPMTVAVRMDSPFKTLADLIDAARKNQGKVSFASTGNGTITHLTGEYLAQRAGVKMLHVPYRGAGPAI
NDTLGGQVDFIVTSVASAEAMVTGRKMRVLGTFTGRRIPSLQGAPTVTEATGLGGMEVPVWAGLLAPAKT
PPAMLRRLESEVLAVCRSPAIHEQFEKLGALSTCAGAPELDRMIKADTQRWSEVIKQGGIQE
>gi|319764864|ref|YP_004128801.1| two-component sensor kinase domain-containing protein [Alicycliphilus denitrificans BC]
MKIFQREQRSLFGEILDWMLTPLLLLWPVSLALTWLVAQGLANKPFDRALEYNAHALAQLVTVQDGRVLF
NLPQPASEILRADESDIVYYQVLSPTGEYLSGERSLPLPPPEERVISGEVRLRDAEMRGIDIRVAYIWVR
VPLPDAPAALVQVAETRFKRSVLATEIIKGVMLPQFVILPLAVLLVWLALARGIKPLHQLEERIRARKPD
DLSPLDHKAVPMEVAPLVDSVNDLLRRLSESMATQKRFLADAAHQLKTPLAGLRMQADLAQREGTSTEEL
KQSLKQIGRSSIRATHTVNQLLALARAEGGSAVVQRQPVDLARLVIEVVEGSVPRAMDKCIDLGYDGVDP
GVPGVWMDGNPTLLKELVRNLVDNAINYTPSTSDHPGMVTARVLPDTFGRVVLLQVEDSGPGVPEAEREL
VFQPFYRALGTDADGSGLGLPIVREIARQHGAEVVLEDVRPGSSMPGARFSVRFAAGRPGA
>gi|319764865|ref|YP_004128802.1| response regulator receiver [Alicycliphilus denitrificans BC]
MRILIAEDDQVLADGLLRTLRGSGAVVDHVASGSEADAALLTNNEFDLLILDLGLPRLHGLEVLKRLRGR
GSALPVLILTAADGIEERVKGLDLGADDYMAKPFALSELEARVRALTRRGMGGTSATIKHGPLVYDQAGR
VATIDGKMVELSARELGLLEVLLQRAGRLVSKEQLVERLCEWGEEVSNNAIEVYIHRLRKKIERGPIRIA
TVRGLGYCLEKIPG
>gi|319764866|ref|YP_004128803.1| 2-aminoethylphosphonate/pyruvate transaminase [Alicycliphilus denitrificans BC]
MSQAITPILLTPGPLTTSERTRRAMLRDWGSWDADFNQITGRIRQRVLDIVHGQGTHECVPMQGSGTFSV
EAAIGTLVPRTGHVLVPNNGAYCARLARICKVLGRRLTTIDYSEAQQVSPADVDRALAADPSITHVALVH
CETGAGVLNPLHEVAQVVARHGRGLIVDAMSSFGAIEIDARKTPFDAVIAASGKCLEGPPGMGFVIARRS
VLEQCEGNAHSLALDLYDQWVYMQKTTQWRFTPPTHIVAALDEAMTQYIEEGGLPARGGRYARNCKALIE
GMRALGLRSYLDEGLQAPIIVTFHAPVDPAYEFKAFYQEVKKRGYILYPGKLTQLETFRVGCIGHFGEAG
IPGAVAAVADALKAMGVKQVSEPEMA
>gi|319764867|ref|YP_004128804.1| 2-aminoethylphosphonate abc transport system, permease protein [Alicycliphilus denitrificans BC]
MTTATLPARGRAAPRQRWSRDEWIARAMMLGAMALLLTFLIAPLFSILVNAVLDKEGNFAGLAHFSAYFE
TPSLLRAAFNSVWVALAVVLAVVLVSVPTAFVCAYALTRTSLPGPFKATVRLIALIPLLAPSLLSAISFV
QWFGNQGVLKFLLGDFSIYGAPGIILAEVYNTFPHALMILVTALSLADGRLYEAATALRTPPWRQFLTIT
LPSSKYGLISACTVVFTYVVSDFGAPKVIGGNFNVLSVDVYKQVVGQLNFSMGAVVGMLLLVPSIVSFAI
DYTVRRKIKAQLTARSVPFTPKPRRVADALLALFCVGVCCMLLATIGMALYTSVIKLWPYNLTFTLDHYR
FALFESDMADAYTNSLKVAFVTAVLGSVIVFLGAYVIEKTRNLGWMRNVMHLMAVLSMAVPGLVLGLGYV
MFFNHPANPLNFLYNTMAILVISMVIHYYTSSHLTAVTALQQIDNEFEAVSASLKVPFFKTFLRVTVPVC
LPAILEIGRYFFVVSMASLSAAIFLYTPETILASVAIMHLDQAGDVGPAAALASLIVVTSVVVSVLYSLA
TRVLLARTQAWRHLRRG
>gi|319764868|ref|YP_004128805.1| 2-aminoethylphosphonate abc transport system, ATP-binding protein component [Alicycliphilus denitrificans BC]
MDMTITKMLAGALDQATPALEIKGIHKNFENFSALRDIDLTVRQGEMLCFLGPSGCGKTTLLRIIAGLET
QTSGSIVQSGRDISWLPASERDYGIVFQSYALFPNLTIAENVAYGLVNGKMRKAEIQARVAELLAMAGLP
TAGGKYPSQLSGGQQQRVALARALATNPGLLLLDEPLSALDATVRVRLRAEIRRLQKQVGITTIMVTHDQ
EEALSMSDRIVVMNHGVIEQVGTPMEIYERPASPFVANFVGKVNVLRGQALGGKRFRVGKMEIECEASEG
SFRLGEDVSLYLRPEDRVAEHLEAGTPYRLGVLVNKVEFLGGLCIAEVSAEALGGQSLGLHFSLNQMHDL
GICEGRRIDIALRASRIRVFSTGRDQA
>gi|319764869|ref|YP_004128806.1| 2-aminoethylphosphonate abc transport system, 1-aminoethylphosphonate-binding protein component [Alicycliphilus denitrificans BC]
MDNETTTRRIPMALCAAALGLAAGMAHAQRTPLLVYTALETDSMKAYKTAFEKANPDIEIKWVRDSTGII
TAKLMAEKANPQADVVAGVAASSLALLDQEGMLQPYQPKGFEALTRTYSDSKNPPAWVGMDVWAAAICFN
TVEAKKRGLPKPETWKDLAKPIYKGAIVMPHPASSGTGFLDVSAWLQMWGEQDGWKYMDALHENIAQYQH
SGSKPCKAAGTGEFPIGISFEFRAYQVVKSGAPVELVFPKEGLGWDIEATAIMKTTKKPEQAKRLADWFA
SKEANQITSNWWAVVAYPGVAQKLKGIPDNYEQLLVKNDLNWAAKNRERILAEWGKRYEGKSEAK
>gi|319764870|ref|YP_004128807.1| phosphonate utilization associated transcriptional regulator [Alicycliphilus denitrificans BC]
MDTKQPPSALAFLQSSSLPMLVQEEIERLIMTGALPVGSRINESELSQRFNTSRGPIREALRALEEAGLV
RTEKNRGMFVREISFEEADEIYELREAMEEIIGRRVALAITNDGIERLKAMVDAMHAAADARELEQYAQL
NLQFHDILLETAGSAKLTETYQRLIKELSLFRMRALGGGGGLSVSADEHGEIVNAIASRDPQRAGTALRR
HVADSRARMHKALGREPAAPSSSSALSSTKEA
>gi|319764871|ref|YP_004128808.1| phosphonoacetate hydrolase [Alicycliphilus denitrificans BC]
MTTTPQTIEVNSRRYRWMQRPVVVVCVDGCEPAYLDAAIAAGVAPCLARMRAEGADLLADCVVPSFTNPN
NLSIVTGAPPAVHGICGNYFFDRELGEEVMMNDPKYLRAGTVLAAFADAGAKVAVVTAKDKLRKLLGNHM
KGICFSSEKADQVTQEENGITGVLDMVGMPVPSVYSAELSEFVFAAGVKLMERHRPDLMYLSTTDYVQHK
AAPGSPAANAFYAMMDKYLAQLDRLGAIIVLTADHGMNDKHGADGSPKVIYLQDQLDAWYGPERARVILP
ITDPYVVHHGALGSYATVYAPDEAAAAEWIERIRALPGVELVLTRAEAAARFELPPDRIGDIVVVSEQST
VLGTSASRHDLSGLDAPLRSHGGISEQRVPLICNRPVSGIASSRRLRNFDALDLALNHAAA
>gi|319764872|ref|YP_004128809.1| phosphonoacetaldehyde dehydrogenase [Alicycliphilus denitrificans BC]
MTVQQLKPAEIRHEALRIAGERVFRDEVIEVTYPYTGEVIATVPKATLEDVRRAYRIARDYKPTLTRYER
YRILMRAGEIIASRLDEISRLITLESGLSRKDTLYEVGRASDVLLFAANQALVDDGQVFSCDLTHHGKSR
KVYTTKEPLLGVITAITPFNHPLNQVIHKVAPAVATNNRMVLKPSEKTPLSACVLADILYEAGLPPEMLS
IVTGDPREIADEMLTHPDVDLVTFTGGVAIGKYIAGKSVYKRQILELGGNDPIIVMEDADVEEAATLAAS
GSYKNSGQRCTAVKRMLVHEKVADQFVELLVQKTKAVKYGDPMDPHTDMGTVIDEPAAQHFERVVDEAIA
GGARLLAGHVRRGALYAPTVLDQVKPEMTVVKHETFGPVSPVIRFKDIDEAIRISNGTAYGLSSSVCTNR
LDYITRFVRELNVGSVNVREVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFCNTKTYSLPW
>gi|319764873|ref|YP_004128810.1| phosphonate degradation operons associated hdig domain protein [Alicycliphilus denitrificans BC]
MSLSLADIEHLFETRGHAQYDGEPVTQLEHALQSAHLAERAGAGSALIAAALLHDLGHLLHDLPGSPTLA
GVDDVHQYRCLPFLRGLFGEATLAPIRLHVDAKRYLCAREPGYLQGLSPDSARSLQLQGGPFDEAQARAF
EALPYAGDALRLRRWDDAAKQEGAATPGLAHFLRHRASA
>gi|319764874|ref|YP_004128811.1| aminophosphonate oxidoreductase [Alicycliphilus denitrificans BC]
MRPFWLEQALMSDGDLAPALQGAQRADVCIVGGGFTGLWTAIQAKQRNPGLDIVILERDLCGAGASGRNG
GCLLTWSAKFLTLRRLFGEAEALRLVRASEAAVDAIGDFVREHGIDAEFRRDGTLYTATAAAQVGTMEPV
VQALQAHGIDSYHALAPAEVARRSGSARNIAGWYSPIAATVQPGKLVRGLRRVALAMGIRIHERSPMLRH
EAGPPAVVHTPSGSVTAGRLVLALNAWMAEALPQFERSIAIVSSDMVITERCPELLQAAGLADGVSVLDS
RTFVYYYRSTEDGRLMLGKGGNTFARGGRIAPVFDQPSPYEAQLTRALRDFFPSLGGVPVTASWNGPSDR
SVSGFPFFGRLNGAGHVFYGFGYSGNGVGPTYMGGQILSSLVLGEDNAWTRSPLTRGPLGLFPPEPVRYL
GSIVVRNAIRRKEAAEDLGRAPWWVDKQLSRFANAAGKADKG
>gi|319764875|ref|YP_004128812.1| alanine racemase [Alicycliphilus denitrificans BC]
MSRPARADFDLAALRANYAHAKAVHGGKVAATLKANAYGHGAVECARALAGQADAFAVAFAQEAMELREA
GLTEPILVLEGAFGMDDVALAQRHGLWLVVHQEEQLRMLESLQDRGGGAGVHAWLKIDTGMHRAGVAPGQ
ARALWQRLAACDKVAGITLMTHLASADEPGNPMTGRQLAVFADATQGLPGPRSIANSAGVLGWKGAHQDW
ARPGIMLYGADPRGMPSDVLQPVMRLASEVFVERWLAPGEALGYGGSFVADRPTRVGLVAMGYADGYPRV
VPSGTPVAVDGRLTRIIGRVAMDMLTVDLTDLPGAGPGAQVELWGSQVSVNQVAAAAGTIAYELLCNVKR
VRRVYLRS
>gi|319764876|ref|YP_004128813.1| fad dependent oxidoreductase [Alicycliphilus denitrificans BC]
MKVIVLGSGVVGVATAYYLARAGADVTVIDRQDGPALDTSFANAGQVSFGYSTPWGAPGIPTKALKWMFE
KHAPLSIRPDGSLFQLRWMAQMLRNCSAERYAVNKERMLRLSNYSRECLQELRRDTGIQYEGRQAGTLQL
FRSQKQVDQAGRDISVLKECGIAYELLDAKGVCQAEPALAQARATIAGGLRLPQDETGDCYLFTNALARM
AQELGVKFRFGTGVDWLLFDGQGAVGGVQLATPDKEVARADRYVLAMGSYSRQLLLSAGLDIPVYPVKGY
SLTIPIQDEALAPVSTVLDETYKIALTRFDQRIRVGGMAELAGFDRTLRPQRRATLEMVTRQLFPGGDLA
RAEFWTGLRPMTPDSTPIVGRTPHRNLFLNTGHGTLGWTMACGSGRLLADIVTGRKTEISTQGLSVDRYL
GSAPALHARPAAGKAA
>gi|319764877|ref|YP_004128814.1| transcription regulator asnc-type-like protein [Alicycliphilus denitrificans BC]
MSELDSIDLRILDLLQQDGRLTMTELGERVGLSTSPCSQRVKRLEAQGVITGYHARVSPAALGKNLLVFV
EITLAQKSEQIFKKVRDELQNMPEVLECHLISGSFDYLVKARLAGMSEYRHLLGSILQQMPVPAQSNSYV
VMEEVKESFVVPVDRGRGRARGAGSGQPLA
>gi|319764878|ref|YP_004128815.1| regulatory protein marr [Alicycliphilus denitrificans BC]
MGETPSSDDRWRQAHLGRLLGHALRRFDARVLQLMARDVQVPLALSNLAAREQVSAAHVHITRHLSLNGD
RLTDLAERAGMAKQSMASLVDQCEAWGLVTREADPHDARARLVRFTPTGLAWLEAFRGAVAQAEAEFRAE
VGSEVATVVALGLEAYANG
>gi|319764879|ref|YP_004128816.1| reca protein [Alicycliphilus denitrificans BC]
MDTIAKTNPAANSEKAKALQAALAQIEKQFGKGTIMRLGEGEAIEDIQVVSTGSLGLDIALGVGGLPRGR
VVEIYGPESSGKTTLTLQVIAEMQKLGGTCAFIDAEHALDTAYAQKLGVNINDILISQPDTGEQALEIVD
SLVRSGAVDLIVVDSVAALVPKAEIEGEMGDALPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIG
VMFGSPETTTGGNALKFYASVRLDIRRTGTIKKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISR
EGEIIDMGVNARILEKSGAWYAYNGEKIGQGRDNAREFLRENPDLAREIENKVREGLGIALLPGATAAQA
PEDKPARGKKSEKAAGAEA
>gi|319764880|ref|YP_004128817.1| regulatory protein recx [Alicycliphilus denitrificans BC]
MGFARLSLKARALRLLAQREHSRSELQAKLARHVQEGEDLAALLDELQARGFIDAARVAESVVHRRAARL
GAQRVAQELRRKGLDEDLVRATAAQLAGTELERARAVWRQRYGGAPAAATPQERARQIRFLAARGFAADV
VRRVVQGGEDDE
>gi|319764881|ref|YP_004128818.1| hypothetical protein Alide_4229 [Alicycliphilus denitrificans BC]
MDISPPSTAHRRLAQLARQRFVDGLCAGLPALDKKLLDFLTELMGRTGTVRDMQLRRDAWMGYQTRHKAW
VELMVRGWRGGLAQQSAPGRTTATPMSDGLALVGDDEVENKILASRMALTVAEQVGAPFDAVRQRTQHLE
GRELASSDILRPEAQCLRLVEQWLEAGLKRDDLQLVLDPLQRELANLALAQYQALLKLYDEQGVAVPNDL
RARVRRSTATGVSRAGALGPESGGAGLAAHSAAQGLPPPHVTPFPHTVAAAAGSGSPLVRARQRAQGVLM
QLRRLLTQPVVAYDMVQPQPASAALVHALSAERVEADLYYSGMATLVEDYSPQAVVHVTNVVRERAAEFK
KKASTAGEKAIIEVVALMFQSILSEDRIPPAVRVWFARLQVPVLRVALAEPEFFSNLTHPARQLIDRMGS
CVLGFDASAISGTALEAEIRRIVQVIEQYPETGKRVFELVHGEFEKFLARFLTERQATSRIVSVAQQVEQ
RETLAIQYTIELRALLKDMPVRDEIRDFLFKTWAEVLAVSAVRDGPQHADTAAYKRAAADLVWAASAKPH
RAERAKVIQQLPALLQCLRQGLALIGVTGAQQDAQIKLLTDTLADAFLSKTASISQEHIDAMVKRLANLE
DFISDETLGDMPLSADNIELLLGIDASSIHVIADNGAPVQEDMVAWAQQLPLGVWFTLDHNGASAQVQYV
WHSQRKQLHLFAAMDGSSYLVQLKRLGAYLQAGLLTAQEEESLTLRATRDALTKIDANPERLFE
>gi|319764882|ref|YP_004128819.1| protein-export membrane protein secf [Alicycliphilus denitrificans BC]
MEFFRIKKDIPFMKYALVLNAVSFITFALAVFFLVTRGLHLSVEFTGGTVMEVAYAQTADIGKVRDKVAA
LGYPDVVVQNFGTSRDVMIRLPVQKGVTSAQQSEQVLAALKSEDPGVTLRRTEFVGPQVGEELVHGGLMA
LGMVVLGIVIYLALRFEWKFGVAAIIANLHDVVIILGFFAFFQWEFSLSVLAGVLAVLGYSVNESVVIFD
RIREAFRKFRKLNTHEVIDHAITSTMSRTIITHASTEAMVLSMFFFGGPSLHYFALALTIGILFGIYSSV
FVAAAIAMWLGVKREDLVKASARKEEDPNDPNSGAVV
>gi|319764883|ref|YP_004128820.1| protein-export membrane protein secd [Alicycliphilus denitrificans BC]
MNRYPVWKYAILVIALLIGALYTLPNFFGEAPAVQVSSAKATIKVDGALQRRVEEVLQSAGVSPDSVVFD
GHSVRARFDTPDNQLKAKDAIEKALVPDPSDPPYIVALNLVSRSPDWLTAINARPMYLGLDLRGGVHFML
QVDMQAAITKKAESYAGDLRTALREKNIRHGGISRDGQAVDIRVRDEATATAARNLVADQFPDLVVASSP
DGEGLRLRATIKPEALRKVQEQALKQNMVTLHNRINELGVAEPVIQQQGLDRIVVQLPGVQDTAKAKDIL
GRTATLEVRMVDEGTEARAAEMGTGPVPFGDEKYLDRNGQAVIVKKQVILTGENLTDAQPGFDGQTQEPT
VNLTLDAKGSRIFKDVTRENIGKRMAIVLFEKGKGEVVTAPVIRSEIGGGRVQISGRMTTTEANDTALLL
RAGSLAAPMEIIEEYTIGPSLGADNIARGIHSVVWGMAAIAAFMCVYYVLFGVFSTIALSVNVLMLIAVL
SMLQATLTLPGIAAMALALGVAIDSNVLINERIREELRAGVAPQAAIAAGYERAWATILDSNVTTLIAGL
ALLAFGTGPVRGFAVVHCIGILTSMFSAVFFSRGLVNLWYGRKKKLKSVAIGQVWKPEDASELRSVAGRS
N
>gi|319764884|ref|YP_004128821.1| preprotein translocase, yajc subunit [Alicycliphilus denitrificans BC]
MFISSAFAQTAPAAAAEGGLMGSLTGMLPLVLMFVVLYFIMIRPQMKRQKEHRAMIDALAKGDEVATAGG
LLGKVAGLSEGYIQLEIASGVQVQVQRSAVSQVLPKGTVK
>gi|319764885|ref|YP_004128822.1| pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein [Alicycliphilus denitrificans BC]
MNAPLPEPVRRALEAVTLEDKYTLGQGRAFMSGVQALVRLPMLQRQRDAAAGLNTAGFISGYRGSPLGGY
DQALWSARKHLADNHIVFQPGVNEELGATAVWGTQQLDLYPQSRKYDGVFGIWYGKGPGVDRSGDVFKHA
NMAGTARHGGVIAVAGDDHISKSSTAAHQSDHIFKACGLPVFFPSTVQDILDMGLHAFAMSRFSGLWSGM
KTVQEVVESSASISVDPDRVKIVLPEDFQMPPGGLHIRWPDAPLEQEARLMDYKWYAALAYVRANRLNYN
VVQGPDDRFGLIASGKAFNDMRQALADLGLDDDTCRRLGIRVHKVNVVWPLEAGITRDFAQGLQEILVVE
EKRQVIEYQIKEQLYNWRADVRPDVLGKFDEVEGDHSGGEWGMPNPSQNWLLRPKADLTPAIIAKAIAKR
LKKLGVPEDVVARMDARLSVIEARERGMAGHKVDTGERMPWFCSGCPHNTSTRVPEGSRAVAGIGCHYMA
NWMPDRNTSTFTQMGGEGVTWVGQAPFTKDRHVFANLGDGTYFHSGLLAIRQSIAAGANITYKILYNDAV
AMTGGQQVGERPEGHSVAQIAHSLRAEGVARLVVVTDEPAKYQGRTHPANAARAGHPELLDDLPPGVQVF
HRDELDRIQRELRDTPGCTALIYDQTCATEKRRRRKRGKLATPAKTVVINELVCEGCGDCSVQSNCLSVE
PVETDFGRKRRINQNSCNKDYSCVKGFCPSFVTIEGGSLRKPRKEKKGSLSGLPPIPEPALPALDAAWGI
VVAGVGGTGVITIGSLLGMAAHLEGKGVVTQDAAGLAQKGGSTWSHVQIARRPEDIHTTKVDTAKADLVI
GCDPIVAANPATLAVMQPGRSFVALNTHGTPAAAFVHNPDWRFPAEGCEAAIAEAVGPGLLGVFDAERAA
TELLGDSIYTNPLILGYAWQKGRVPLTHAALMRAMELNGVQVENNQAAFEWGRRCAHDLAAVQALYQAAQ
VIQFVKKPGLAEMVDRRVEFLTGYQNAAYAAEYKAFVDKVQAAEGALGQGTRLTEAVARYLFKLMAYKDE
YEVARLHTDPAFTQRLEGMFEGDWRIVHHLAPPTFAKHDDTGQLVKKSYGPWMRKAMGVLARFKGLRGTA
LDPFGRTEERKTERALIREYRACVDELLAGLSAERLPLAAEIARIPEDIRGYGHVKERHLQAARKKWFAL
MDRWRAPAQAPRRTA
>gi|319764886|ref|YP_004128823.1| transcription regulator asnc-type-like protein [Alicycliphilus denitrificans BC]
METLDKYDLAILRELQQDARLTNAELAQRVGLSAAPCWRRVRALEESGFIRGYRAEIDRHKIGLGVLAFV
RLDAERSTGDLTRAMEQAIAKIPEVVSCHYISGTGTFELQVVARDLDSFSQFARTVLLNLPNVKDMHTSF
SLGEVKAGGALPLTHLG
>gi|319764887|ref|YP_004128824.1| hypothetical protein Alide_4235 [Alicycliphilus denitrificans BC]
MPPQPAHDNTAPDPMAPDTQANRTSDIADAAEAAAQAELRRSAAERAPQSPLAPLSAPVFRMLWLTWLMA
NTCMWMNDVAAAWLMTTLTTSPVLVALVQTASNLPVFLLGLPSGALADILDRRRYFMATQFWVAIVAVVL
CLAVLSGGLNAYLLLALTFANGIGMAMRWPVFSAIVPELVDRHHLPAALALNGVAVNASRIIGPLLAGAI
IASAGSAWVFVFNAVLSLVAAFTIMRWRRQPTPNPLGRERLGSAMRVGLQFVRESPPMRAVMWRISVFFL
HATSLMALLPLVARELEGGGAGTFTVLLASMGAGAIGAAMLLPRLRQMMATDRLVSVGMLLQALAVSVVA
IAPSVYIAVPAMVLAGAAWITTANVLVVAAQFALPNWVRARGMSILQMAIMGATALGAALWGQVAALTTV
HVSLALAAAAGVAAMALVQRLVSNRHGEEDLSPSHAFKAPQAETPPAAGLRLVTSVEYFINPARAAEFRA
VMQETRRARLRQGALSWELQHDIADPCRYVERIVDESWTEHLRRFDRVTASDVALRDRKNAFHVGDAPPV
VSRYVVEEE
>gi|319764888|ref|YP_004128825.1| mlta domain protein [Alicycliphilus denitrificans BC]
MALIVGMLAACSTPVPMAPSTAPTARPGPAGPVAVPGTLSQSKSRWVPVAWNELPGFEGDALHEAWNAWL
RSCERPAPAFAPLCGDVRRLTIASPEEQREWMMQRLQPYRIESLDGGADGLLTGYFEPYLDAARQPGNGF
VVPLYAPPADLAARRPWYTRQQIETLPQAQAALAGRAIAWVRDPVQAMVLHIQGSGRLRVQEADGSQRLV
RLAFAGTNDQPYRSVGKWLLDQGLVRDATWPGISAWVAQNPQRVNEMLWSNPRYVFFREEPLDALDAAFG
PKGAQGVPLTPGRSIAVDRQSIPYGTPVWLASSGPTAQLSRLVLAQDTGSAILGAVRADYFTGWGQEAGD
MAGRLKQNLRLWALWPR
>gi|319764889|ref|YP_004128826.1| hypothetical protein Alide_4237 [Alicycliphilus denitrificans BC]
MVLILLEALVALLIFVGILWWTMFSGRKRGELPPPADKDE
>gi|319764890|ref|YP_004128827.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
MRKPLLIGTVAVVMLATGCADMSETQRRTAIGAGAGALGGAAIGAMTGGRAGTGAVIGAGVGALGTYIWS
QHMEKQKQEMQAATQGTGVTVTQTADNQLKLDIPSDISFATNRSDIQPSFRPILDRFAEGLRNNPNAEVR
IIGHTDSTGNDAINDPLSLDRATSTRNYLTARGVSGARIHVDGRGSREPIASNDTAEGRARNRRVEIFMG
ERQG
>gi|319764891|ref|YP_004128828.1| response regulator receiver [Alicycliphilus denitrificans BC]
MEPASNATVYIVDDDAEVREALAWLLRSRRVFSEAFASAEAFELMLAERAASGLSQRQPCCLLLDVRMPG
MSGLALFDKMVERGDTAAIPVIFLTGHADVPTAVATVKRGAFDFCEKPFSDNQLVDRVQEALALSARHLQ
ACRARHELQDRLAELTERERDVMRLVVEGLPNKLIADQLDISVRTVEVHRARVFDKMQVKSAVELANLLR
S
>gi|319764892|ref|YP_004128829.1| pas sensor protein [Alicycliphilus denitrificans BC]
MERGEGVEEAAPADAPELPPQGVVQRRLRRWAGAWRRWSLWALLVLLVASMLVTLVWLAGRYEASQVQAR
LERDTADAVVDIRNAFAHNLQNLQALQAGDPDLASWEARAAELLATRRELVRIEWRDAQLQLRAHAESPY
RPQHWDPSKRSSLHSEAALACTNAQRINGPSYSSSYFQPLPDGAGAEMMEVCLPQIQDRRVRGFVVATYA
LQTVLQDLVAPGLQRTQEVSFTEADGTRLALIGAMRRGSRMFTAQQLFDLPGNTLVLRMDGWHAAPSVFP
NVLTALVTAMSIALVTVLVVLVRDNRRRLRAERDLGDALAFRKTMEDSLLTGLRARDLSGRITYVNPAFC
DMVGYAAEELVGQALPPYWPPEHAHEYAERQSVRMAGRLDPPREGYETIFMRKDGTRFPVMIYEAPLINA
HGLHTGWMGSFLDVSEQRRVEELSRASHERLQATARLATVGEMASLLSHELNQPLAAISSYATGSLNLLE
CPAGCAQPAPQDLADVRVAVQRIAAQAERAGRVIKSVHDFVRRRDQSREPVTAQDLFDAVLPLIRLQANK
VGVRVLLDIRPGLPRVLCDTTMVEQVLLNLARNAMQAMDSPDIHPRILELRVRRAACNAAKGWLEFSVAD
MGVGIAPEVAERLFTPFYTTRAEGMGLGLSLCRTVVEQHGGFLGHAARTPRGTVFTFTLPAFQETEL
>gi|319764893|ref|YP_004128830.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Alicycliphilus denitrificans BC]
MKVAALQMVSGVALQANLDQARRLLEQAAQAGAELAVLPEYFSAMGLRDEDKLALGETPGDGPVQRFLAD
AARALGLWIVGGTLPLATGSRERVHNSSLVFSPEGACVARYDKIHLFRFDNGREHFDEARVIEAGTRCVH
FDLLARDGRLWRVGLSVCYDLRFPELYRAHARAGADLLLVPSAFTYTTGRAHWELLLRARAVENLAYVLA
PAQGGTHENGRRTWGHSMLVDPWGQVLAQQDEGAGVVLGELDAGHLNQVRGQLPALTHRVL
>gi|319764894|ref|YP_004128831.1| hypothetical protein Alide_4242 [Alicycliphilus denitrificans BC]
MTELSSHPSRLLRFVAGCARWGLGLLLALWLLLAAAWGALHGWIVPRIGDFRPQLEAQAQRALGVPVRIA
AVSARSEGFFPAVELSGVALLDPQGREALRLPRVVVALSPRSLLRLGFEQIYIEGPELDIRREQDGRIFI
AGLSFRDTGETDSAAADWLFAQPEVAIRGGTLRWSDALRGAEPLALTQVDLVLRNGALRHGIRLDATPPP
DWGERFTLRGQFRQPLLTTHGGNWQRWSGQMYAYFAQVDVSRLNRHADLGTLQVRQGRGALRAWVDVQQG
RVVGGAADMALGAVDATLRPDLRPLLLGTVTGRVGGRWLDDGFELATRDLQFVADDGLRWTGGNLFLRHT
GQGRAGWEQGELRADRLDLAAVSQIAGRLPLDEAVHGVLQTYAPRGVVEQLQAGWRGPLQEPRQYQLRGK
VTGLSLAAQDGVPAVAGLAGADVEFELTQAGGRAALAMAGGRLLLPGVFEDPVVPVQQLSATVRWQIEGE
RIAVQASDLRFANADAQGEARLAWQTADPATSPARARLPGVLDLAGTLQRADATRVHRYLPLAVPAQARH
YVRDAIRAGSASQVQFRVKGDLHDFPYGHVPHRGEFRVAAQVKDVRYDYVPPALLGPGDRPWPALTGLGG
ELVFDRAGMTVRNATASFAGRPAVRVQKVGARIADLEHSVVEVDAQVRGPLQDMLALVGGSQIAQLTHGA
LDRATASGAAELQLGLNLPIDAMERSSVRGSVLLTGNEVRFVPEAPTVSGARGAVQFNEHGFTLAGVQGQ
ALGGEVRLEGGMGAQDSTVRVRARGTATAEGLRAAPQLGLLSRLARHASGSAAYTLNLGVRRGEPEIQVN
TDLVGMALAAPAPLGKAAQAPLAVRFDNQLTREAAASDDAPLQDQLTLELGGVARLAYVRALDGGQPRVL
RGAIAVGEVAKEGLSLPEQGVFANAALAELDADAWRALLDDPAPAPAAQPAGEGPAPDYLPTRLALRAAT
LTAQGRTLHDVVAGATRAGTVWRANVSARELEGYLEYLPGGAPAADGQAPQDRLHARLARLAIPQAADMQ
VNELLDARQPGRLPALDIVVQDFELRGRRLGRLEIEARNRAAADGQREWRLSRFNLVAPEATLTSSGSWA
LLGGAGGEAQRRTAMDFELDIRDSGELLARFGMPGVLRRGQGRMAGQVSWLGSPLSPDYRSMTGQMHVDM
QAGQFLKAEPGLAKLLSVLSLQSLPRRFALDFRDVFSEGFAFDFVRGDVHIAKGVATTNNLQMKGVNAAV
LMEGSADIARETQDLHVVVVPEINAMTASLVATAINPVVGLGSFLAQVFLRGPLIQAATQDFRIDGTWAE
PHVERIRGRKSTPADAAAVPEPGGKP
>gi|319764895|ref|YP_004128832.1| (glutamate--ammonia-ligase) adenylyltransferase [Alicycliphilus denitrificans BC]
MPMPCTESVADSGPLSHHSRFHQRLGRRYGAELALLAPGVPDHAAMDQACESLLARGHDLGAALRILRQL
VMHRLITLDCDQGAVLSDITLPVTALAELALDRACRAARAELDARHGAPLGPQGQPVQLWVVGMGKLGAR
ELNVSSDIDLVYVYEHDGETAGLEGGRGRLSNHEYFARAVKAIYALVGETTEHGFVFRVDLALRPHGNSG
PAALSLSALEDYLQVHGREWERFAWLKSRVVAPLDCLGTPNVQALRGVVLPFVFRRYLDYAVFDALRALH
HQIRDHAVQRSAGRPERANDVKLSRGGIREIEFTVQLLQVVRGGQFPELRCRPTLEALERLERAGLMSRE
TAAQLAAAYTFLRRVEHRIQYLDDQQTHVLPTRDEDLAWIARTMGLSCCDFLRELDAHRELVAQEFDTLL
GGAQHKRCGNGGCGKPRTAEAPAPELEALLEQLPSALRERVAEWRTHPRVQGLRDEARARLLRIVQRTAR
WLAEGRVNEVAAVRLVGWLEPLLRRESYLALLLERPLVHERLLHLLGAAKWPARYMLQHPGVIDELASEA
LLSERFVAADFEHELGLRLAALQSTGEDDDENLLDLLRRAHHAEIFRTLARDVEGRITVEQVADDLSALA
DSVLRVTAQWCWGRLRNRHRTDDGQPQFAIIGYGKLGGKELGYGSDLDIVFVFDDDDERAPEVYAAFVRK
LINWLTVKTGEGDLFEIDTALRPNGNSGLLVTSFKAYADYQQQRGSNTAWTWEHQAMTRARFVLGSEHLR
ARFDAVREAVITAPRDRAALRTEIIAMRERMRAAHPVPAGLFDVKHSEGGMVDAEFAVQYLVLSQSADHP
ALQGNLGNIALLQHAEGAGLLPAGVGRAAADAYRTLRQVQHRARLNEEPTRVPPETLAAERDAILALWRA
VFGHS
>gi|319764896|ref|YP_004128833.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus denitrificans BC]
MQSLKPFTPLIAAAVLAAGGTLLARAAQEAPAPAPRPALTVAVAQPERISMHRRLAANGNVAAWQEASIG
AEVSGLRLAEVRVNVGDVVRAGQVLAVFADDTVRADAAQARAGLLEARAAAAEAQANADRAAALSATGAM
SQQQIQQYATAAQTAQARVAAAQAALDAQELRLKHTRVLAPDAGVISARTATVGAVMGAGTELFRMVRRA
RLEWRAEVASADLPRLRAGGKALVTAASGAQVEGRVRMLAPTVDPQTRNALVYVDLPAHPDVRAGMFARG
EFLLGAHEALSVPLSAVVVRDGFSYVFEVDAQGRVAMRRVQTGQRSGGRVEITEGLSLEARIVQQGGAFL
NDGDLVRTAAEGSEKKQAPGQSSKALPATK
>gi|319764897|ref|YP_004128834.1| acriflavin resistance protein [Alicycliphilus denitrificans BC]
MNFSAWSIRNPVPAAMLFVLLTLAGLLSFSAMKVQNFPDMDLPVVMVTAALPGAAPGQLESDVARKIENA
IATTQRLKHITTTLVDGTATIAAEYQLEKPVQEAVDDVRSAVSRVRADLPADLRDPVVTKLELSSQPILA
FAIASSKLDEQELSWFVDDQLTRRLLAVPGVGAVSRVGGATREVRVALDPLRLQALGVTAAEVSRQLRQV
QLESAGGRAELGGAEQPLRTLATMQTAGQIAALEIPVSGGRRIRLDQLAQVSDTVAEPRTAALLDGRPVI
GFEVSRARGASEVEVGAGVQRALDALQAEHPHLQLTRTVDFVEIAQDEYDSSMHLLYEGAILAVVVVWLF
LRDWRATIVSAVALPLSVIPAFIGMYLLGFSINIITLLALSLVVGILVDDAIVEVENIVRHLRMGKTPYQ
AAMEAADEIGLAVIATTFTLIAVFLPTAFMSGIAGRFFKQFGWTAALAVFASLVVARMLTPMMAAYLLKP
LATQEREPRWLAAYMRASGWCLRHRVLTLAGALLFFAGSLALIPLLPSGFIPADDNAQTQVTLELPPGTK
LAETHALAQRAGALAMNVGHVQRIYTTIGGGSAGTDPFAGAGTGDPRKATLTLTMDPRRERPRKQEIEQR
LRDAMAQLPGVRVKVGLGGSNDKYILALASEDPQALATAARAVERDLRTIAGIGGVSSTASLVRPEIAVH
PDFARAADLGVTSQAIAETLRVATVGDYEQYLPKLNLAQRQVPIVVRLQDAAREDLSVLERLAVPGSRGP
VRLGEVARLEVAGGPAVINRYDRSRNVNFEIELGSRGLGEVTEAVRQLPAVQGLPASVRLIDVGDAEMMG
ELFASFGLAMLTGVVCIYIVLVLLFKDLLQPVTILAALPLSLGGAFVALLLAGKSFSMPSLIGLIMLMGI
ATKNSILLVEYAIVARRQGMDRIHALLDACHKRARPIIMTTLAMGAGMMPIALALGGADMSFRSPMAVAV
IGGLITSTVLSLLVVPSVFTYVDDFEQWLRRLRHQNATR
>gi|319764898|ref|YP_004128835.1| glutathione s-transferase domain protein [Alicycliphilus denitrificans BC]
MKLIGSMASPYVRKVRVVMAEKKLDYRFQEDNVWSDDTAINASNPLGKVPCLVMEGGEAMFDSRVIVEYL
DTLSPVGKLIPASGRERAEVKTWEALADGVLDAGVLARLEATWAGRQDGERCQAWIDRQLGKVRTGLSAM
SQGLGEKAYCSGIHLSLSDIAVGCALGWLEFRFPQIAWRADHPNLGRLMDKLMQRQSFIDTQPR
>gi|319764899|ref|YP_004128836.1| adenylosuccinate lyase [Alicycliphilus denitrificans BC]
MSLSTITALSPLDGRYAAKLSALRPIMSEYGYMHRRVQVEVAWFIALSDAGFDEFKPLSTGARAYLLGLV
KNFSEADCAAIKDIEKTTNHDVKAVEYWIKSKFEARPELEKAAEFVHFACTSEDINNTSHALQIRAGRDQ
VILPGLDRIVLKLREMARAFADVPMLSRTHGQTASPTTVGKELANVVVRLQGAVERIAAVKILAKMNGAV
GNYNAHLAAWPDFDWEAFSKKVVETHEPMGLGLTFQPYSIQIEPHDYMAELFDAISRSNTILVDLSRDIW
GYVSLGYFKQKLKAGEIGSSTMPHKVNPIDFENAEGNLGLANALLRHLAEKLPVSRWQRDLTDSTVLRNI
GVALGYTALAHSSLMTGLGKLELNEQTLAADLDASWEVLAEPIQTVMRRYGVAGAYEKLKEVTRGQAVTP
EALHGLIQGLAIPQADKDRLLAMTPASYTGKAAELARRV
>gi|319764900|ref|YP_004128837.1| yaeq family protein [Alicycliphilus denitrificans BC]
MALKSTIFKANLAIADIDHGYYADHALTLARHPSETDERMMVRLAALALQAHELQDICRGDGTLAFGAGL
SDPDDPDVSLTDFTGRKRLWIEVGQPEDKPLSKAASRADAVVVYAFHHAAEVWWKGIESKLSRLDKLQVW
RLPADAVQQLAQLAERSMQLQATIQEGALTLSSQRGSVHVEPLRWK
>gi|319764901|ref|YP_004128838.1| hypothetical protein Alide_4249 [Alicycliphilus denitrificans BC]
MLRLTQAPDIAMAMLWRDLLCEAGMPASVQRQHLGAAAGQLPPGECLPEIWLAHEEHAERARALLREFER
LPQRQWLCRACGECIEGGFEQCWNCGACMPR
>gi|319764902|ref|YP_004128839.1| hypothetical protein Alide_4250 [Alicycliphilus denitrificans BC]
MPSAIHISDIEAAINHWRARAPSPDGVALAPELVALAEVYGRMVFMRADEVGEEQLAPLARAAWLVWYET
TPDTPCIAICSTSQGDAWCKGCGRSFAEVQHWLEMSPADKRAVWRRITREGKALRFTRYAERAL
>gi|319764903|ref|YP_004128840.1| integral membrane protein terc [Alicycliphilus denitrificans BC]
MDLDFLTHTPFWIALGQIIIIDILLGGDNAVVIALACRKLPTVQRTKGIIYGTAGAIILRVILIVFAMTL
LNLPFLKVVGALLLVWIGVKLIAPDEEGHSDVAGSDKLLAAIKTIIVADLVMSVDNVIAIAGAAQNSGEH
QVLLVVLGLLISIPIIVWGSQLVIKLMERFPLIITGGGMLLGWIAGGMLVSDPALANPDRWQWMFKLPQS
GTVHYAACVAGALLVLAIGKAIASQRGKAAPVQQG
>gi|319764904|ref|YP_004128841.1| hypothetical protein Alide_4252 [Alicycliphilus denitrificans BC]
MDKVIVYVDDADYARQKLESMAVRSAAANTHWVLVACAPRMTHRISKWVSHSARENWRAKWADKLFAQLQ
PWLGGAGNRVSTVLAKGPLPELLTQLLAEHGTHTPVLDARRPKLEPQEAPQPPAANTAPIVTRKPARRWS
VPGSLTSLGLLFLFAD
>gi|319764905|ref|YP_004128842.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MNLRQLQHFVVLGEVLNFRKAADKLHIVQPALTASIRRLEIEFGVDLFERTTRDVKLSAAGRAALPEVKR
ALQQMDRARRNAKATQTGEWGTLRVGFVGSASMALLPAGIRAFRTRFPDVVLGLQESTGSRIVDLIDNGQ
MDVGLIRTPAVNNRGLTIHTLQTQRFMVVIPRGSEWEPARNTKKVRLQDLANAPFITFSRDESPMLYLAV
VSVCREAGFTPNIVQEAIQVQTVVTLVESGLGVGLVPSVCAQHKPANASFFELAKQTPACATGLALVYDA
GSLSPVGRRFVQTLSELAEQDGPAPV
>gi|319764906|ref|YP_004128843.1| hypothetical protein Alide_4254 [Alicycliphilus denitrificans BC]
MVSSMLTLMPQVSAGRVRPLAVTSLKRAEIAPNIPTVAEAGLPGYSASTWYGLFAPAGVPQDVVQRLADA
METVLKDKDVQAKLAAQGLSMVPEVNSPAAFGAYVQTEAQKWQSVVQAAGISAD
>gi|319764907|ref|YP_004128844.1| hypothetical protein Alide_4256 [Alicycliphilus denitrificans BC]
MRLLLKWLLSAAALLCVAYLYSGVEVHSFGSALLAAFVIGLFNAVLRPVLVILTLPVTIVTIGLFLFVIN
ALMFWAAASVLGEGFQVHGFTAALIGSLIYSLLGMVIESALGGLFLQK
>gi|319764908|ref|YP_004128845.1| peptidase m48 ste24p [Alicycliphilus denitrificans BC]
MGRVLAASLLIVFCTAQAPVALAQSQLPMMGDGAEMTTSAERKLGDRIIRELYRDPDYIDDAVLQEYVQD
LFQALVQAARERGELSPELQERFAWQILLGRDRTVNAFALPGGYFGVHLGLIGVVGTRDELASVLAHELS
HVTQRHIARLMAQQGRQTPLMLGAMILGALAAAKNPAAAQAMMVGGQALAVQNQLNFSRDMEREADRVGF
GLMQPAGFAPQGFVGMFDKLQQANRINDNGSWPYLRSHPLTTQRIADMHSRVPQGAAAPAPATLQHLMMA
ARARVLMRPGVDTWRQWVAEPQDAGFAARPLAQRVPAWYAATLAAVQLGDMAAARQCLRGLQADVRGDAA
AARQARLLGAELELAAGDAPAALTYLQDSVVAGAEKKAGAPTGRPEMLLRTQALLRTGAAADMAGLLQTW
VTSHPGDATAWQLLAQVWQQQKQPLRAVRAEAEAQVARYDYAAAVDRFKAGQDLARRGGVAADHIEASII
DTRLRAVQSLLKEQAAER
>gi|319764909|ref|YP_004128846.1| molybdenum cofactor biosynthesis protein c [Alicycliphilus denitrificans BC]
MTTPTSPLTHFDAQGQAHMVDVGAKPATHRTAIATGRIEMQPTTLALIASGTAKKGDVLGVARIAGIMAA
KKTSELIPLCHPLALTRVAVEFELLEAENAVQCTATVETVGPTGVEMEALTAVQVALLTVYDMCKAADKR
MVMTGVRVLEKHGGKSGSFVA
>gi|319764910|ref|YP_004128847.1| fimbrial assembly protein, fimb [Alicycliphilus denitrificans BC]
MFFSQRALFAIRAALVHLLISLLVATVAAALVLWVWFPQPYDLLSGGRELFLMLVGVDVVCGPLLTLVLF
NPTKLRRELFIDMGLVVLIQFSALLYGLHTAYVARPLFLVHEVDRFRVITTGDYGDVDVEAALAKLDTPL
RPHWLKRPLTIGIRDPRDAAERMTVLMESVAGGRDFAQRPEFYVPYDSAYRSKALSRAKPLQAFIRHYPI
IAGSANDLLKKHNLALADSLFLPVMHRQEWVAVLDESARILGFLPGDGFEVQD
>gi|319764911|ref|YP_004128848.1| type iv pilin structural subunit [Alicycliphilus denitrificans BC]
MKRTLQKGFTLIELMIVVAIIGILAAVALPAYQDYTVRSRVTEGLNLVEPAKAVMASEGVASALDMGNVA
RDWNAQASNTGANSKFVNSILFAGAPAAGTAQTDNPVITITYNATAVGLTTSTNTLTLTPWIRSGAAGAG
QTAVAAVTAGDSGVLDWACASASTAATKDGITIATKGTMLSKFAPAQCR
>gi|319764912|ref|YP_004128849.1| cyclic-amp phosphodiesterase [Alicycliphilus denitrificans BC]
MKVRILGCSGTLAKGCRTTSFLLGERILVDAGTGVGELTLEEMQRVDHVFLTHSHLDHIAALPLLLDAVG
AHRARPLQVHALPATLDALRAHVFNGVIWPDFTRIPTPQAPFVRLLPLGVGDVFVVAGTPLEVLPARHSV
PAVGYAARGQRGWWVYSGDTEGQEPAFWRRVNALRQSPGGVAALCIETAFSNAEAELARKSQHLSPATLA
RELTALPPGADLPIYITHAKPQQSGLIMREVQALEHGALRLIDLQAVDVLSV
>gi|319764913|ref|YP_004128850.1| forkhead-associated protein [Alicycliphilus denitrificans BC]
MPRMVVSIDGVVIKEVPLTQERTTVGRRPYNDVVIDNLAVSGEHAVFVMTGDDVQVYDLGSTNGTYVNGK
AIKQQSLRSGDTVEMGKYKIHFLHEAPRQDYEKTVLIETGRPQAAAVPAAAPASGTVRVMTGPAAGREVV
LTKVVTTIGKPGVAVASITRRHHSFVLAHVEGAEPPRLNGTPIGAEPVALKNGDRIALAGAEMEFVLG
>gi|319764914|ref|YP_004128851.1| protein phosphatase 2c-like protein [Alicycliphilus denitrificans BC]
MKPPPKLSYEFCALTDTGRVRSNNEDAVAIHEATQLVMLADGMGGYSAGEVASGMAINYIGTEFAQWLED
APANTPVAEVRRALEACVDNANHAILGASLTNPQYLGMGTTLVVGVFRGDRLILAHIGDSRCYRLRAGEL
RQITRDHSWLQEQVDMGLFTPAQAAASGLRNLVTRALGVDASMHAEVNEFTVEPQDLFILCSDGLTDMMS
DDDLAALARLPIALPDKAQRMVALANARGGRDNISVLLAQAGAQDTRRSLVSRLLRMP
>gi|319764915|ref|YP_004128852.1| integral membrane protein terc [Alicycliphilus denitrificans BC]
MEFLSNADFWIGLVKIVWINIILSGDNAVVIALAARSLPPAQQKKAIMFGSGAAVVLRIVLTVVAAKLLQ
LSFLQIVGGCLLLWIGYQLLTGEEEEEGDAKAGGGMMAAIRTILIADLVMSLDNVIAVAATAQGNMVLLV
LGLAISIPLVIFGSTLMIKLMERFPVIVTLGAALIGWVGGETIVNDNLLHDYAVGHPWLHYVAAAAGAVL
VVMVGKLIQSRNAPQQA
>gi|319764916|ref|YP_004128853.1| succinyl-CoA synthetase, alpha subunit [Alicycliphilus denitrificans BC]
MSIYINKDTRVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKIFDIPIYGSVKDAAQQTGAT
VSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMKAKEAAGGKRTLLLGPNCPGLITPD
EIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLTELGIGQSSAVGIGGDPINGLKHIDVMKAFNDDPDT
DAVIMIGEIGGPDEAEAARWCKDNMKKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGF
RITRNPSEMGRILKGLL
>gi|319764917|ref|YP_004128854.1| succinyl-CoA synthetase, beta subunit [Alicycliphilus denitrificans BC]
MKIHEYQGKEILRSFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHAGGRGKGGGVKVAKTIDDVK
TLASQILGMQLVTHQTGPEGQKVRRLYIEDGADIKNELYVSLVTDRATQKVALIASSEGGMDIEEVAHST
PEKIITEMIDPLTGITAEQSRKVAAAIGLTGASVDQAVDLFAKLYKCYMDTDASLVEINPLNCDSKGNLI
ALDAKFNFDANALFRHPDIVALRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFG
GEPANFLDVGGGATPEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVITACKAVNLQVPLVVRMK
GTNEELGKKMLAESGLPIISADTMAEAATKIVEAVR
>gi|319764918|ref|YP_004128855.1| n-acetyl-gamma-glutamyl-phosphate reductase [Alicycliphilus denitrificans BC]
MPKVFIDGEAGTTGLQIRERLQAMPQVELVSIAPERRKDPAAKRDLIAGVDLAVLCLHDDAARETAALVD
AITAETGRTIKIIDASTAHRTAPGWVFGFPELAAGQLEAVRAATRVANPGCYATGAIALLRPLVDAGLVP
ADHPLALPSVSGYSGGGRPMIESYENGQAPLFELYGLGLSHKHLPEIMRYTGLTRRPIFVPSVGNFRQGM
LVQLPLHLDLLPGRPKAADLHDALAAHYAKSNTPEQWVKVLPPTEDGRLDALALNDTNRMELRVYANEAY
RHAVLVARLDNLGKGASGAAVQNLKLMLGL
>gi|319764919|ref|YP_004128856.1| DNA protecting protein dpra [Alicycliphilus denitrificans BC]
MDRDELAAWLRLSLTPGVGNGAARRLLAAFGLPQAVFAQTEGAWQSCVTVAQARALAAVPEGLDALLEQT
WQWLQADAEPARAIVTLGDAAYPPALLATEDPPLLLYLLGAPQFVRAQPFAPPRCLAMVGSRNPTAQGAD
HARQFARALRAAGLTIVSGLALGVDAAAHEGALQGPPDPATPATIAVVGTGLDRVYPRANKELAHRIARH
GLLVSEYPLGTPPLAANFPKRNRIISGLSQGTLVVEAALASGSLITARLAAEQGREVFAIPGSIHAPQSR
GCHALLRQGAKLVETAQDVLEELRLPAAEQAPASDAPPPAAPAHQEVLDALGFDPLGLDALVARTGLPAA
TLQVRLLELELDGQVARLPGGLFQRVGSA
>gi|319764920|ref|YP_004128857.1| peptidoglycan-binding lysin domain protein [Alicycliphilus denitrificans BC]
MHDKSNDMTAPSRVRVAAFAALALGAMLASAAQAQHYPITPGQRATAQQVASRGVPLSELAANAPDTYVV
KRGDTLWGISGMYLQRPWRWPELWGMNLQQIANPHLIYPGQTLYLEKADGYARLRTSPAGATETVRVSPR
TRYDSLADSALPTLKMHLIEPFLVEPLVVDELTLEQAPRIVATRDERVIMASGDRVYARGPQGSPLELEP
GVPRQYRVFRNAVALKDPDTGEVLGHEAQYLGRAELVRGEAIEPVPGAKDGEADIVPATLDLSGAKEAIR
AGDRLLPAPQRSYLNFVPHAPQAPVQASVVSIYGSDAVANAGQNQVIAINLGAQDGMEAGLVLQLRTRGE
RIKDKTDEDRAMIRLPSEANGLAMVFLTFDRVSYALILQAGRGVRVGDRLVNPE
>gi|319764921|ref|YP_004128858.1| peptide deformylase [Alicycliphilus denitrificans BC]
MAILPILCYPDPRLHKVAKPVATVDERVRAIVDDMLATMYDANGIGLAATQVDVHERIVVIDVSEERDQP
LVLINPEITWASPETRMGEEGCLSVPGIYDGVERSLAVHARALDRDGQPRTIEAEGLLAVCIQHEMDHLL
GKVFVEYLSPLKRNRIKTKLLKQQKQQAVRA
>gi|319764922|ref|YP_004128859.1| lipoprotein transmembrane [Alicycliphilus denitrificans BC]
MKPLRAAALLLAAALAGCAVPEWQKPGTPQADIERAMGRPTQTEPLPGGGERLLYSRQPAGQQVYHMDFD
AQRRLVRVTQVLTLENFQALHNGVDTQGSVRRMFGPPALVEKVARFHGDILTYRILDNGEPRQAHVHVDP
EGVVRRVMFTDERLRDPDPHR
>gi|319764923|ref|YP_004128860.1| methionyl-tRNA formyltransferase [Alicycliphilus denitrificans BC]
MKVIFAGTPEFARVALEHLLAAGFTVPLVLTQPDRPAGRGMKLQASPVKQCALEHGTAVAQPRSLRLDGK
YPEDAAAARAAIEATQADAMVVAAYGLILPQWVLDTMSAARPPEGEKAPLGGSEPRAAGSVGAKNGLGCL
NIHASLLPRWRGAAPIHRAIEAGDAETGVTIMQMDAGLDTGDMLLMEKTAIAPLDTTATLHDRLAQIGGR
LIVLALELAVRGGLKATPQPAEGVSYAHKIEKAESQIDWSLPAEAIARRVRAFDPFPGAATRLGADAIKV
WSCEIDSCQRFPDKPCGHILHIDDAGIAVACGAGSVLRLTVLQRAGGKRLQAADFLRGFTLTPGMVLGSA
P
>gi|319764924|ref|YP_004128861.1| azlc family protein [Alicycliphilus denitrificans BC]
MSLPAWRAHLRDPSFRQGARDMLGTGLGIGAWGLVTGVAMVKGGLSTPLALFMSLTVYAGSAQLAVLPLM
VAGAPLWVVWLTATCVNLRFVIFSSMWRSYFAHLPRRQRMALGYFSGDVIFVGFMQRFPKPQPDPAQLPY
FWGAATTNWLAWQVPSVTGIVLSNAIPLSWGLGFAGVLALLGILLSMLADRASWLATAVACTAAVATFAL
PLKLNILVAIAAAVTAGLVTEAGERALRRARARGAGGDA
>gi|319764925|ref|YP_004128862.1| branched-chain amino acid transport [Alicycliphilus denitrificans BC]
MNGAWLEPIVAILGLVAITLVTRAFFMIPERDLPMPDWLRRGLKYAPLAALAAVIAPELVMAQGALIQTL
ADARLPAVAAAAVYYFWRRGILGTIVVGMAVYLPLHMGLGW
>gi|319764926|ref|YP_004128863.1| phosphoglycerate kinase [Alicycliphilus denitrificans BC]
MHILRFSDLCAQGKARGQRVFIRADLNVPQDDAGRITEDTRIRASVPCIRMALDAGAAVMVTSHLGRPTE
GEFKPGDSLAPVARRLSELLGREVPLVAGWVDGVQVQPGQVVLLENCRVNKGEKKNSPELAQKMAALCDI
YVNDAFGTAHRAEGTTYGIAEYAKVACAGPLLAAEIDAITKALANPKRPLVAIVAGSKVSTKLTILQSLS
KNVDGLVVGGGIANTFMLAAGLPIGKSLAEPDLLGEAKAVIAAMAARGAEVPIPTDVVVAKAFAADAPAT
VKKAADVAEDDMILDIGPETAARLAAQLKAAGTIVWNGPVGVFEFDQFAGGTKAIAQAIAESSAFSIAGG
GDTLAAIAKYGIENRVGYISTGGGAFLEVLEGKTLPAFEILQKRAAG
>gi|319764927|ref|YP_004128864.1| hypothetical protein Alide_4276 [Alicycliphilus denitrificans BC]
MSFTKALGWTVAAGAAFVLAGCGSAPIPLSKNFELTSQYKVRSAGHWELLSRDVVAQTRATLEKAGYAPN
TPLHVAAPAQPSAFDLGFRDFLITEFVQEGATVQQGPGAALEVSYNTQVVRHNSDRPHFIPGQFTMLAAG
VMAAYGLRHEHLDTKLLATLGLTTAADYANSINSGGPTNTELILTTTVSRAGQYVARKTDVYYLENADTP
LFLRPAHYRAVNMKVVSQ
>gi|319764928|ref|YP_004128865.1| hypothetical protein Alide_4277 [Alicycliphilus denitrificans BC]
MKRTLALALVSALFAAGCAQKAPQLRVEPTYQEAANAPLLQNSREAVGRLVAGLDVAATGPGPVLVATVV
NVNDLSRSAPLGRTLSEQYANNMAAIGFDVKEIKLRGDVFVKEGAGELLLSREIKDIARHHNASMVLVGT
YSPAANFTYVSMKLVRTEDSRIIRGHDYALPNDRDVQRLLAVAR
>gi|319764929|ref|YP_004128866.1| hypothetical protein Alide_4278 [Alicycliphilus denitrificans BC]
MPAFSRRQLIVLVLLTLVWGFNWPVMKMGVAHFPPLTFRMASLWLGLPILALLVRQQGLPLAIPREHWGR
VALLALTNMVLWHVLMILAIPLLSSGRAAILGYTMPIFSAVIGALFFGDRLARRGWAGVGAALLGVVLLL
WHEMGALGSRPMGVTLMLVSAASWALGTQLLRRLPVPVPLITLSFWMVAITCASLTVLAALFEHERWHMP
DRQAWAAILYNGLLVLGFAQTAWFFLVRTLPPVASTLSVMMIPVLGVFSGALWLGEVLRWQDWTAVALMA
VAIASVLWPANKK
>gi|319764930|ref|YP_004128867.1| orotidine 5'-phosphate decarboxylase [Alicycliphilus denitrificans BC]
MTFLDMLRDATARNDSLLCVGLDPEPTRFPESVRGEAHRIYDFCAAIVDATADLVCAFKPQIAYFAAHAA
EDQLERLMQHMRANAPHVPVILDAKRGDIGSTAEQYAREAFERYGADAVTLSPFMGFDSIAPYLEYHGKG
AFLLCRTSNPGGDDLQAQRLASVEGQPLLYEHVARLAQGQWNKNGQLGLVVGATYPAEIERVRALAPTLP
LLIPGVGAQGGDAAATVRAGLREDGPIIVNSSRAVLYASGGADFAAAARSAAQATRAALNAARV
>gi|319764931|ref|YP_004128868.1| regulatory protein lysr [Alicycliphilus denitrificans BC]
MQLKWLEDFIALAHERSFTRAAELRHVTHPAFGRRIRALEAWAGTPLTEREGGGPVRLTPAGQAFLETAQ
QMAQGLAHSHEELRAIAGRQARTVTLATGRTLARTVVADWLARIQPVLEGGELRVRTCALAESVAMIERG
EADFTLAYHHTSLAVRLDARQFTHLALATDRLVPVVRARAGGAPLHHFGGTGAVPYLAYSHTLALGRLVE
DHLAHDPLAPRLARVVECDSADAQHEYVLRGLGVAWLPWSMVHADCQSGRLALAGDERMEVRFDVRMYRP
KRRLSPWAEALWGTLARK
>gi|319764932|ref|YP_004128869.1| hypothetical protein Alide_4281 [Alicycliphilus denitrificans BC]
MHPSRTPAPLRRALLAGAALLAAASPAVFAQTPVYPSKPITIVVGYPPGGSTDLTGRAVGAELSNRLGVP
VVIENLGGAGGAIGAQKVASSAPDGYTLLVGANNEIAINKLVTKKVKYDIKDFTAIGLVASQPLVLVAGT
HTGVKNIAEFTERVRRNPGKFSYGSSGVGTSLHLAGEMIKEQGKLFMTHIPYRGVAPLTNDLVGNNLEFG
VFVLSSGLPHIKSGKVVALGTTEARRSAAAPDIPALAESAQYKNVDIGTWFALMAPANLPRPVAERLKKA
LGETLESPDFRKRMEASGSTVASAGVDVDQFLATEVAKYKKIIEFARIEE
>gi|319764933|ref|YP_004128870.1| hypothetical protein Alide_4282 [Alicycliphilus denitrificans BC]
MTSAPLTFALPAPDLGPWRAGNTGTEGVWRFDSGRPGRHVMISALIHGNELCGAWAIKGLIEAGVRPQAG
TLTLALCNLAAFDRFDATDHDASRFVDEDMNRQWSDERMDAADTLERRRCAQLRPFVREADWLLDLHSMH
EPCAPLLLTGTQPRNLRLARAMAAPEHVVVDAGHKDGTRMRDYGRFGLPDEAAGASRSLLVECGFHGDPA
SRAVAQDQCLRFLQAAGTLDAAALGRLLPGWRLPDAPRQWALEVTGPVVAKSGRFRFTEPFRGLEVIAKA
GTVIGDNDGEPVATPYDDCVLVMPSTRQARAGVTVVRYATRRML
>gi|319764934|ref|YP_004128871.1| chemotaxis sensory transducer [Alicycliphilus denitrificans BC]
MQLLDRLRLSHKFLILGGIALVMMALPAGLYLHGRIGQMQALSAQARTMPALQQLGQAVRLAQTHRGLSA
ALLGGDTQLAARRPAVRDALDEALQAAAARLDGVAPGQAAEFARLRQDWQALQQGVAERAIAPAQSLARH
TQLVARLLAFSDQLLHASGLSTSDRRDTQALIQATLQQLPMLGEQLGQMRAIGTGALARGELPPESRGQM
RALRARADEFDAASQASLQRATQYAPGLAAALGEPLAAEKARVAEALRLVDDGLLEAASLQLPAARYFDT
LTASIEAVNALGGQATDALLAVVQDQAAAARRALGLVVGMLVALLLLAVALAGVFVRSITRPLGQAVDLA
RAVAGGDLSGADRPHGSNEVGQLIAAQQQMRAQLRPIVAQVRHGSEGVALASGEIAQGNHDLSGRTEAQA
SALEETAASMEQLSATVQHNAEAAREASALAEHTRDMVRQGGASVEQVVDTMRSVHEAQQQMADIIQVID
GIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRSLAGRSGEAAKQIRTLIEASRTRVDQGNQQAAAAG
QTMAEVVHSIQRLSALVGQISTASQEQANGVAQVGEAVAALDQTTQQNAALVEQMAAAADGLSSQAQGLV
QAVAVFRTAGGNAAAYRPAALSLTY
>gi|319764935|ref|YP_004128872.1| excinuclease abc, a subunit [Alicycliphilus denitrificans BC]
MADTAPLPAPLSAPDAGRPLAQVLRGAGQISIRGARTHNLKNIDLDIPRNQLVVITGLSGSGKSSLAFDT
LYAEGQRRYVESLSAYARQFLGRLDKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYAR
AGTPYCPDHGLPLAAQTVSQMVDAVLALPEDTRLMLLAPVARQKKGEFAELFEQMLALGYVRLRVDGQIH
EHEALPELKKNEKHDIDVVIDRLKVRPDARQRLAESIEAVLRVGGSEGAGRVLALEMDTGREHLFSARFA
CPVCSYALPELEPRLFSFNSPTGACPACDGLGQQELFDAARVVAFPSLSLASGAIKGWDRRNGYYFAMLE
SLARHYGFDVDTPFEQLPERVRQVVLHGSGEEEIAFSYLQGSGSSKGKPIVRSHPFEGILPNMARRWRET
DSAVVREDLARYRQSQPCAECGGARLRREARYVRVGEGDAARGIDDVSHMTLADVQDWFGALRLSGAKAE
IAGKIVREIAARLSFLNDVGLSYLSLARSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDN
DRLIATLTRLRDLGNSVIVVEHDEDMIRAADHCVDMGPGAGVHGGRVMAQGTYAELCANPGSLTGQFLSG
ARSLPVPARRTPWLPVLEQAAAPEGGKKPKPRFPETAASQRRKERLAGHHATQGRLQAVRVLGATGNNLR
SVSVEFPVGLLTCVTGVSGSGKSTLVNDTLHKAAARQIHRAHEEPAPHQALEGLDYFDKVINVDQSPIGR
TPRSNPATYTGLFTPIRELMAETNTAKERGYGPGRFSFNVSQASGGGRCEACQGDGVVKVEMHFLPDVYV
PCDVCHGQRYNRETLEVQWKGRNIAQILQLTVEDAYAFFKDVPAIARKLQTLLDVGLSYIRLGQSATTLS
GGEAQRVKLAQELSRRDTGRTLYILDEPTTGLHFADIALLLKVLLQLRDAGNTIVVIEHNLDVIKTADWV
IDMGPEGGAGGGTVVAVGTPEEVAANEASHTGRYLRRYLQEK
>gi|319764936|ref|YP_004128873.1| major facilitator superfamily mfs_1 [Alicycliphilus denitrificans BC]
MTALERRSSLGLAAIFAMRMLGLFLVLPVFMLEARKYAGGDDPALVGLAMGMYGLTQAFFQLPLGMASDR
FGRKRVIALGLLVFAAGSLVAALADSVMGLLVGRALQGAGAVSAAVTALLADQTRDAVRTKAMALVGMSI
GLMFAVALVAAPFLAAHVGLSGLFVLTFALALAGVALILWVVPPETRHHGAAPQGRPSDVWRHADLLRLN
LGVFALHTIQMAMWVAVPAMLVQAGLPKDVHWHVYLPALVLSVVAMGGLLAMERRGRLRAALLLSIGLIA
LVQAALGGLVAGGVAPTVALLGTLLFVFFCGFNMLEATQPSLVSRMAPAHLRGAALGAYNTLQSLGLFAG
GALGGALAKWAGAGGLFAATALLAALWLALTWPLRPVGRGGH
>gi|319764937|ref|YP_004128874.1| single-strand binding protein [Alicycliphilus denitrificans BC]
MASVNKVIIVGNLGRDPEMRTFPSGDQVANVRIATTDRWRDKNTGENKEATEWHSVVFNGRLAEIVGQYL
RKGSQVYVEGSLRTRKWTDQSGQERYTTEIRADTMQMLGSRQGQGGAGGGYDDGGYGEGGGYEAPRRAAP
APRPAPPAARPAPAPAPAAQPPRAASGFDDMDDDIPF
>gi|319764938|ref|YP_004128875.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MTQSTASDEPPAPAEAAISDPVSSGPRSLVRVLSIFGLLAKTEEGMTLTELSQALNSPKSSLLGLLRPLV
GTKYLVQSGNRYQPGPAILQLSMSLMAGHSYSSLARGFVQELASQSNESAYLTALDRQHRIVTYIDAIES
KQAVRYAVGVGAVRPLFVSAAGRVLLAYQPPEWIESFLSTGPFHSPVSGEAVEVSRLREDLQRIRGEGCA
VSLSEAVEGAAGVAAPLFDAMGQVSHALLLAAPLDRMTKSLPKMRELVIEVAGRASRTLANARTYQAAGQ
RL
>gi|319764939|ref|YP_004128876.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MSSSSTAEESRGRGPLHGIRLIELAGIGPAPFAAMLLADLGATVLRIDRPVPAQLGIERPLKFNLLLRNR
QNLAIDLKSEAGRALVLELVERADGLIEGFRPGVTERLGLGPDPCLARNPRLVYGRMTGWGQDGPLAQAA
GHDLNYIALTGVLSWIGRPEQGPVPPLNLVGDFGGGGLYLALGMLAAILESRIRGHGQVVDAAIIDGTAS
LATSVFGMHAAGLLGSRGSNILDGGAPFYDVYRCKDGKYVCIAPIEPKFYAELCRLLGHSIEAIGRQQDR
QAWGATKEQLRRIFASNTRDEWCVLLEGTDACFSPVLEPEEAAAHPHLKARQTFVEVDGVVQPAPAPRFS
RSAPQAPKPPETPTERGSLDALRDWLGEDGAGRWSGHLAKAGA
>gi|319764940|ref|YP_004128877.1| hypothetical protein Alide_4289 [Alicycliphilus denitrificans BC]
MGISRICVGKWASAAIFGLGFALPAIAQDKWPNQPIKLIVPFAAGGATDQVARLVASKMGAVLGTTVVVD
NRVGANGNIGADLVAKAAPDGYTFLHTTSSIAFTAAFKQKVHYNLTKDLQPVTLAINQPLLVMSSLQSGI
VDSATLRQYLRKHDNKVTYASSGNGNLTHLAMYVVLNALGADATHVPYKGGAAAFPDFIAGRVDLFSDPI
NSAYPHVREKRVTALAVTGEKRSPLAPDVPTVNESLLPGFTMGAWQAVFAPAGTPPEIVAKMRQAYGVAL
QDPSIKAKLASDGAEAIGSSGDELKVFMDSEIKRWEKVVQASGVKLD
>gi|319764941|ref|YP_004128878.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MSSIYLSKEELQAIVDRSSFNRWLGMTVDKVLKDSVCLRITWRDELISSPERQSIHGGVIAALIDCAADY
VIAAHLGHAVPTIDLHIDYHRVARPGDLMAEARITHLGSTMGVATARVTDEQGRLVASGRGLYMAAARPA
STPPAPH
>gi|319764942|ref|YP_004128879.1| hypothetical protein Alide_4291 [Alicycliphilus denitrificans BC]
MNLKSIMSSLLLAAGAGATTLSAHAQEVYPAKPIRMLLGFAAGGGTDVIARALADRIGAVLGQPVVVDNK
PGANGNIAAEMVARAPADGYTLLYNTSSIAISPGLYPKLTYNVTKDLAPVSITANLPIVLVAAKNLNITS
AQDFVAYLKKHPGQLDYASAGNGNITHLSALLFLQATGTVANHIPYRSEAPAMTDLAGGQVSFYLGTSPG
VIPLMKDGRVQGLATASLKRMPAVPDLPTLSETVAKGLELGAWSGIMAPAGTRPEVIQKLNAAIGLALQD
KALLEKFAVQAAEPRHGTPEQYGAFIQAELSRWSQIIKANNVRID
>gi|319764943|ref|YP_004128880.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MKGLSNRVAVITGGAGGIGAALCRRMNEEGVKVAILDLNRDVAASLAGELGRSGVEAKAYGVDITSYEQV
EATVADIEATLGPIDILVNNAGWDHAARFVDTDPQLWHKLIAINLVGPLNLQHTVVKRMIARGFGRIVNV
SSDAGRVGSSGESVYSACKGGVISFSKTLAREVARKQITVNVVCPGPTETALFRDFAGAGESGEKLRGAL
TKAIPFGRLGQPQDVVGAVCFLSSDDAAFITGQVLSVSGGLTMAG
>gi|319764944|ref|YP_004128881.1| maoc domain protein dehydratase [Alicycliphilus denitrificans BC]
MSDNGMPTVGLGLYFEDLPVGRKFKTLGRTVMDADICAFCNVIHMTEVLFTDMEFVKNESDIKGRIAPGA
FIYGVAEGLLAQSTMQKTGYAFINMELTVHRPVFAGDTLHVECEVIESRASKSRPGRALVRTANKVVNQK
GQVVLSYTPLRMVKCKSAAT
>gi|319764945|ref|YP_004128882.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MYYALTEDQRQIQDLLRRVAREKVAQRADEIDRTAEYPHDMYALLKELGLFTLPFPTEYGGTGSMLSACI
AIEELARVCYNTAYLLLVQWVPFGAILHGGTDEQKGRLLPGLASGEMRGAFSTTEAQSGSDVSGIRTRAV
KVQGGYRINGAKIWCTNSDLADFVLVAAKYEQGGKDGISLFIVERGTPGFTVGKKEDKIGARGVPSCPLF
LDDVFVPEHNLVGGGFKAVMEAFNASRPLIGARGVGLAQGAIDHASAFIKERRAFGQQICDFQGVRWMLA
DMAIQTEAARHLVYRAASLVDQAAPSAELAPIAAMAKCFASDTAMKVATDAVQLFGAAGVSSEYPINRYF
RDAKVLQIIEGTNQIQRNIVANSLLGRVSRSN
>gi|319764946|ref|YP_004128883.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MAGPLSRVRVLDLTRVLAGPWSTQMLADLGADVIKVERPILGDDTRHWGPPWIKDEAGESTTDSAYFSST
NRNKRSIAIDLSKADGQRLIRELAKGCDVLVENYKVGDLKRHGLSYEDLKAVNPALIYCSVTGYGQDGPY
AEKPGYDFIFQGEGGLMSINGEEDGKPGGGPMKTSIAITDVLTGLNATIAILAALEHRRNTGEGQHIDVS
LLDTIVHFGSNQIVSYFTSGEVPKRWGNAHPNLTPYQSFRTSDGHLIIACGNDGQFVKLCVALGQEQWAR
DPRFARMADRNINREPLIAQLSAIFEKETTAFWLKALEHCDVPNGSINTYDKVFEHPQVVARQLKVRQQH
AAGGEITTVRNPIRLSKTPIEYLRPPPLRAQHTQEVLSSVLDLSERELGRLEAARVIEIAKKDK
>gi|319764947|ref|YP_004128884.1| 2-ketocyclohexanecarboxyl-CoA hydrolase [Alicycliphilus denitrificans BC]
MTDYTDIQYAVKDGVATLCINRPEKYNAFRGKTCDELIDALHRAGWDKSIGAIVLTGAGDKAFCTGGDQS
AHDGGYDGRGVIGLPVEELQGLIREVPKPVIARVNGFAIGGGNVLVTCCDLAIASDKAVFGQVGPKVGSV
DPGFGTAFLARVIGEKKAREIWYLCRRYSAQEALAMGLVNAVVPHDQLDAEVEKWCAEILEKSPTAIAIA
KRSFNADSDSIRGIASLGMQALALYYNTPESHEGVEAFLQKRKPNFRSKL
>gi|319764948|ref|YP_004128885.1| l-lactate transport [Alicycliphilus denitrificans BC]
MVWQQIYDPLGNMVISTALAAVPVVVMLAALGFFHIKAHIAAGMGLAAALLVAIFVYGMPADMAGRAALL
GGFTGLLPIGWIVLNIIFLHQLTEQNGSFAVLQDSLSGITEDRRIQLLLIAFCFGAFFEGAAGFGTPVAV
TAAILIGLGFSPLAASGLSLIANTAPVAFGALGTPVITLAKVHGYDLMEVTAMIGRQLPFFSLLVPFWLI
WAFAGRKGMMEIWPAILVTGVSFAIPQFLVSNYIGPELVDIIAAIISMVCLVAFLRVWKPKTVWTSASLR
HHDVSAAEAKPAKPVTRHSTQALVAAWTPWVILSVFVFIWGLPSVKTWLNGIFAPAFPMEGLHNMIEKVP
PVVAKPTKEGAVYVLNLLSATGTGILLSAIVSAFVMKYSPVAIVRTFFKTIWLVKYSLLTIVLMLALGTL
TRYSGTDTTLGLAFANTGVLYPFFGTLMGWLGVALTGSDTASNVLFGGMQKVAAEQLHLSPNLMGAANSS
GGVMGKMIDAQSIVVASTATRWFDHEGDILRYVFFHSIALACLVGLYVTMQAYVWPFSLMVVH
>gi|319764949|ref|YP_004128886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Alicycliphilus denitrificans BC]
MTASTKQRVVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSRQDFLDAASVADVIGIEI
EHVNFAAEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAMRLGAEKIATGHYARVRHNPATGL
FELLKGLDPAKDQSYFLHRLNQEQLARTLFPVGELRKTEVRRIAEEIGLPNAKKKDSTGICFIGERPFRE
FLNRYISHEPGPILDDRGRRLGRHVGLSFYTLGQRQGLGIGGVKEKGAQRGGGEHAPWFVARKELATNTL
RVVQGHDHPWLLSHRLAAQDASWVAGRPPAPGACAAKTRYRQQDAACTVLAAQGGAFSLQFSEAQWAVTP
GQSAVLYDGEVCLGGGVIATVDG
>gi|319764950|ref|YP_004128887.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MNIKFDLADIQAFAAVAELQSFRAAAESIHLSQPAFSRRIEKLEEALGVRLLDRTTRRVTLTAVGRDFAR
KTQQWLDDLDGMLMGLGDVAARRMGEVTIACVPSAVYYFLPQVVKRYHERFPRIRVKVHDASANEVLVAV
AQGDADFGLNFIGSQEAEIEFKPVLAERFVAACRRDHALARRKKVTWAELGRHDFMSVGKTSGNRLLMDL
ALANVPDRPQCLYEAKHVTTLLGLVEAGLGVAAVPSLAMPGRDHPTLVSIPLVEPVVTRQMGLIKRRGKS
LSPAAQQLYDLLVATRSARPRSAPAPQKIQSGR
>gi|319764951|ref|YP_004128888.1| hypothetical protein Alide_4300 [Alicycliphilus denitrificans BC]
MSYELPCILMRGGTSRGPFFLADWLPQDPGVRDRMLLAALGSPHELQIDGLGGGNSLTSKVAIVSRSRHA
GCDVDYLFAQVSVEEARVDTSPNCGNMLAGVGPFAIEQGLVPAAPGAGTTLVRVFNVNTRSRIDVRVCTC
NGRVLYEGDVRIDGVQGTAAPVLLSFLDAWGSVTGSLFPTGRRTDTIDGVELTCIDAAQVMVLVRARDLG
LRGDEAPATLDADGALLARLESLRRTAGLRMGLGDVSDSVLPKPVIVAPGARPGQIVSRYFTPRRCHRSH
AATGAIGVAAALALPGTVAHGAQWRPGAGTHRVAVQHPAGRIEVDVELGGAHADPQLRQACLVRTARKIL
EGTLYVPDHALA
>gi|319764952|ref|YP_004128889.1| hypothetical protein Alide_4301 [Alicycliphilus denitrificans BC]
MTRSTPPRRRMLALGGALALAGLLTAGPALASFPAKPVTLIVPTAAGGGNDAMARVLAQKMSQLLGQPVV
VDNKAGANGAIASEFVARAAPDGYTLLFGYIGTHGMNPALQKLRYDPIAHFEPIGMVCYSPTLMVVNPQV
PARTAAEFVQLTKAAPDKYNYASAGSGTAPHFAAEMFKLETGARLAHVPYKGSAPAMTDTIAGQTQLMFP
SLFAAYPYVKGGKLHALAVAGAKRSPLLPQVPTLEELGIRGVDVTQWYALFAPAKTPRAVVDRLNQALLA
ALADKDVARRIEDHGAVVDPSSPDALGQTVRQELAKWRGVVTKAHLSAD
>gi|319764953|ref|YP_004128890.1| porin gram-negative type [Alicycliphilus denitrificans BC]
MEEKTLIRETRALCALLAATAAPAFAQASGVTLYGIVDLSVRQASGLTPGHAPSDASHAGLGSGVNNTSR
WGLRGSEDLGGGAKALFNLEAGINADTGASANSGKFFDRASWLGLQGGWGTLAAGRQTTLLADAVSPVDP
LGMRFAGFNPNINVAALSQHGLGIQYGGTGSTSGSYRLDNALKYTGRFGAVTARAMHGFGELAGGGARLS
SSGLGLAYARQGLALSGAYQTFKDADARDLDAYLAGAAYQWGSVRWAATAGRNQAQTSATARTVQRVLSA
GGTWSATPAADLTLAYYKVDRSRTLQAGDGYGRLVAFGEYKLSRRTRLYAEFDATRWRGGYQGAGKKAHA
RGTSLGVLHHF
>gi|319764954|ref|YP_004128891.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MELRQLRYFVRIVELGSMGRAALDLGMVQSALSQQVSRLEGELCTRLLQRTAKGAVPTEAGMAFFREAQL
VLRHAEQAARAAQQARLTGSVSVGLAPTTASVLGVPLLRAMRERHPDVRLHMVSSLSGHLSNMLNARQLD
LAVLFDTQPARRWSVVPLLEERLFLIRSAHRSARPLPAPGQGTVRLAQLGEEPLILPSGPHGLRSQIDAA
FAHARIAPQVALEIDSLSLLMDAVDAGLGSTVQPWAAVAAFADAGERFVLAEIADAPAFRPSALCSLSDD
ELSPAALATRVVLAECSRTLVGSGAWVGATLVPH
>gi|319764955|ref|YP_004128892.1| precorrin 3b synthase cobz [Alicycliphilus denitrificans BC]
MIDVLVIGGGNAALCAALMAREAGASVLLLESAPRAWRGGNSAHTRNLRCMHDAPQDVLVDAYPEEEYWQ
DLLKVTGGLTNEHLARMVIRASSTCRPWMRHHGVHFQPALAGTLHVARTNAFFMGGGKALVNAYYRSAEA
LGVQVRYESPVDRLEIVDGQFRAAWCQGERIEARSCVLAAGGFESNREWLREAWGQNGRGEWPADNFLIR
GTAYNQGVLLRHMLDEHGADRIGDPTQAHMVAIDARAPLYDGGICTRIDCVSLGVVVNANAERFYDEGED
FWPKRYAIWGRLVAQQPGQTGYSIIDSKAIGRFMPPVFPGVRADSLPELAARLGLDVDTFMRTLNAYNGA
CRVGRFDHTVLDDCATSGLFPAKTHWARPIDTAPFYGYALRPGVTFTYLGLQTDDTAAVRFGDRPSANLF
VAGEMMAGNVLGKGYTAGVGMSIGTAFGRIAGRNAALAARGQSAEHGAVKDEESHASA
>gi|319764956|ref|YP_004128893.1| citb domain protein [Alicycliphilus denitrificans BC]
MQALEALTRDAKALANGTPVPMSAAETEVARVMQICNACRYCEGFCAVFPAMTRRLEFATADVHYLANLC
HNCGACLHACQYAPPHEFAVNVPQAMATVRGQTYSDYAWPPALGSLYRRNGLTLSLALVAALTLFLVLGA
VLQGGGLTALWKTDLGNDFYNLFPHNLLVGLFAPVFLFVVLALAMGVRAFWKDVKPATSGADVGGAAAGE
AAHDVLRLKYLDGGHGDGCHNEDDAYTLKRRRAHHLTFYGFALCFAATSLGTIYHYAFGWVAPYDLPSVP
KLLGAAGGVLMVLGTAGLWHLNRTRHPLHGDAAQKPMDLGFIALLFLVAASGLALWLARATPALALLLCL
HLGAVMALFATLPYGKFAHGVFRTAALLRYNTEKRQPNPIGLGSD
>gi|319764957|ref|YP_004128894.1| hypothetical protein Alide_4306 [Alicycliphilus denitrificans BC]
MKKRTLIQAAAAAATSLAWAGPALAQDFPPAKPVTLVVGFAPGGAADAAARMIAKKLAENIGQAVVVENK
GGAGGNIAHQQVAAGPSDGTVLLFGSVGPLTIAPHLMKLAYDPFKDLAPISGGVYFPNVLVVHKGAGVKT
LAEFVQLSKAKPGSVDFASTGAGSASHLAGELFNQRAGIDMVHVPYKGGAPALQDLLGERVTSYFAAPPT
AMPHVETGKLIPLATTGLTRPAYLPNIPTVAESGYPGFQALNWYAFVASGKTPAPLLDRWNQEIVKTLND
PGVKEALNKHGLSPHPTTRKEFADFMKKEYNQWGAIVKERKITAQ
>gi|319764958|ref|YP_004128895.1| sigma-54 factor interaction domain-containing protein [Alicycliphilus denitrificans BC]
MPSAVHDQPAENRFLGVLVWQCGVSEPVARLGLAADPLVHAAVAEALRSRAQGLGGGVLFHVDVPAPCEG
AGMVRCVVVALGDDAVQVAIVRTSGEAAALLDFVAAVPFAFAILNMFLTNPYQAITVADREGLMRYISPV
HERFLGLEPGAAIGRPAEDVIPNSRLPQVARSGKAEIGDLQQFGPDVTRIVNRVPVFEEGAVVGAVGQVS
FSGVEALNRLQQRLNQLRDEVRHYKRELSQLKGGGAAAAALVGSSAPMLRLSREIDAVARLDVPVLILGE
SGSGKELVAQALHARGRDADAPLVSLNLAALPATLIESELFGYQAGAFTGGRKQGQPGKLEQAEGGTLFL
DEVADIPMEIQVKLLRVLEDRQVQRLGATEGRRINFRIVAATHRDLRALIDSGRFRLDLFYRLSGVVLQV
PALRQRVEDIPALVQRFAQSFCERNGIPLPRIAPGVMGYLAQQSWPGNVRQLRQRVEEALVFCDGRLLNV
EDFARHQDPLARSAQQPMGQSSHVAIPLKSLEHAAILEAIARNGGNKKRAAQELGISRSYLYKVLGGA
>gi|319764959|ref|YP_004128896.1| carboxyl transferase [Alicycliphilus denitrificans BC]
MSWQPEVDEIAYRHALAAQLGGEEKVARHKAAGKLTVRERIDACTDKDSFVEVGSLTGSGQYDSMGRLVE
FTPSNLVMGRARIGGRHVVVVGDDFTVRGGANDGAVGEKLIFAEKMAHDLRLPMVRLVDGTGGGGSVRNI
ETKGYTSVPTMKVWSQVVENLSTVPVVSLALGSVAGMGAARVASSHYSVMVKGTSQLFNAGPPVVARIGQ
IVDKNELGGSQVHTRNGVVDDEVATEEEAFERVRRFLSYLPSSVHELPARGDTSDDPKRRDEWLLAAIPR
DSRKVYKIRPIVECLVDRDSFLEIGRQWGRAIVTGLARINGWPVAVVASDPYFYGGGWDGPSSEKFTRFV
DLAQTFHLPVVNLVDIAGFQIGVEAEKAGIMRYGVRALAAVYQATVPWCSIIIRRAYGVAAAGHQHMGRF
NFRYAWPSANWGSLPIEGGLEVAYKAEIEGADNPEQKRNEIEQRVRSLTSPFRTAEAFGIDEVIDPRHTR
ALLCEFAELAAPLREAGAPRFGLRP
>gi|319764960|ref|YP_004128897.1| hypothetical protein Alide_4309 [Alicycliphilus denitrificans BC]
MTAGNARAPSRRTALALCMGLAWMAAQSAHAQSQADAWPNRPIRIVVGFPAGSFTDTIARTLSDHMGKAL
GQPVIVDNKPGANGAIGVGEVARAAPDGYTLLVTNSSSITINPQIYKKITYKATDFAPVTMVLDAPFILT
VNPAWAEKNHIHTAQDVVGFSKRNPDKISYGSAGPGNIAHLAYAAWSNRTGVKTTHVPYKSASQAQMAVL
SGELDTQFDTWSALPHIASGKLLALAVTAPKRMQQLPDVPTMAEAGYADFNVTFWAGLLAPAGTPPAIVN
KLYEVSKGVLQDARARAVLSSQGEPVMLPPAQFSQRIAKEVADWGQVIQREALSLD
>gi|319764961|ref|YP_004128898.1| CoA-binding domain protein [Alicycliphilus denitrificans BC]
MSLLRALNPRAVAILGASDNPIKPGGRPIAYMLRHGFAGRILPVNPKRSEVQGLPAFPSLRELPAPPDAV
VISLPSEDVAAAIDDCVAVGASMAVIYSSGFAELGDAGRAQQAELLARAQRGGLRLFGPNCQGVANFSTG
AILNFSTMINENPPEDGPVAIVSQSGAGAAILYGGLRRAGIGMRYMVSTGNEADVCAAEAVRTVLGDEHI
RLVVLYLETLRQSAQLAEAARLARARGVPILAVKAGRTSAGQATASSHTGALAAEDALADAFMRQHGIVR
LTDFRELIDYAPLFLSQPTPRGRRVVSISNSGATCVLSADAAEDFGLAIGQFDAATLAGLTQALPSYVTA
RNPIDMTTALLGKPDTFGKTLAVLSGSGAADLVHVGFPIGGEGYDFADFAAQASRFARDSGIPIAVSVNQ
DWVAAAFQAQDVPTFWSERAAMRGLALLAERVGAGYGAGAAAAPCAAAASTTLDEPSSLAQLHEAGLPVM
RHMVVASEAEVRAAFGTLPVPLVAKGVCADLAHKSEHGLVRLDIRSADQAVQAFHDFAATLRRLGARDGG
MLLGAQHRADFELALGAHVDPEFGVVVMIGQGGVLVEALKDVQFLVAPFDRAQALEAIGRLAIAPAFAAV
RGMPAVEPGAVADMMVRLGDWMLAQAGHVQSVDANPVLVARGAQQPPVIVDAVVAVARKETA
>gi|319764962|ref|YP_004128899.1| biotin carboxylase [Alicycliphilus denitrificans BC]
MTDAPRAIRRVLVANRGAVAARVIRTLRHMGIESVAVHSEADVDLPYVRAADQAVAIGPSPTQQSYLNQA
RLLEAARETGADAVHPGYGFLSESAAFAEAVQQQGLCFIGPSPRWIRALGHKTQAREFMAAHGMPQSSSS
PVLHGAGDALAAAARIGYPVLVKPAGGGGGIGMLPARSPQELDAAWAKASGIAAKFFGNADLYLERLVEA
PRHIEFQVLADRYGNVRVLFERDCSVQRRHQKVVEEARPTGIPEERLADMRRLLSDLLSRVGYDVIGTVE
TLYTPQDGFMFLEMNTRLQVEHAVTEEVTGIDIVEAQIRLAAGEPMHDVLPGQPTARGHAIEARIYAEDP
VRFLPSPGQLTRFDLPCGDGLRVETGYAQGCAVTPFYDPMVAKLVAHGSDRAQAIARLGSALARTHIEGV
KTNTVFIQKILAHADFLENRIDTGIAQRVLDNTQA
>gi|319764963|ref|YP_004128900.1| biotin/lipoyl attachment domain-containing protein [Alicycliphilus denitrificans BC]
MTTIESPIAGLVAAVETTEGSAIEAGATLIIVESMKMEIPVESEVAGVVRQLFVTAGEQIAEGQAVAEIG
>gi|319764964|ref|YP_004128901.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MSAAPTTDDLQAAALARGYFGIDVPFMAYIGLEPVGLEPGLARTRLPLRPELANSRGHGHGGALMSALDF
TLSAAARSGNPLGLGVITIEMNTHFLAPATTDLLIEARVLREGARIVFCEGNVTDAGGNTVCTARAVFKL
VALS
>gi|319764965|ref|YP_004128902.1| nudix hydrolase [Alicycliphilus denitrificans BC]
MPNRWKPNVTVAAIVEREGRFLFVEENTADGLRLNNPAGHLDPGESPVDACVREVLEETAYDFEPTALVG
VYLNRFRRTRTGDDITYLRITFAGSVGAHHAWRALDDGIVRAVWLTPDELRSCRARHRSPFVLLSLEDYL
GGRRMPLNVIHTDASVLQPPR
>gi|319764966|ref|YP_004128903.1| hypothetical protein Alide_4315 [Alicycliphilus denitrificans BC]
MLERIRHRRRLGTAVLAVFTLAWLVALFASVQVRLVLPQPGPLHMEVCSADPHEAAAPEADAHAGHHADS
GCLLCIALGTPPVMALAAFRQPLPVAQQARLSPAEAVPAWRAQAPLPARGPPLSVHA
>gi|319764967|ref|YP_004128904.1| tonb-dependent copper receptor [Alicycliphilus denitrificans BC]
MTANFSRAPAPHGAALPARAPGSRLAPIACAIACALLPAVPALAAGDANAPSERTLRDVVVTAVHDHSPV
QVVADPKQPRQPIPASDAADYLKTIPGFSAIRSGGSNSDPVLRGQFGSRLPLLTNGTLLLGACPGRMDAP
SSYISPETFDQLTVIKGPQTVLWGPGASAGVVRFDRERPDFQEPGVRFSASLLGASAGRNDQTVDLEAGN
TQMYVRATANHSHGQDYRDGNGRRVPSAWDKWNADVALGLTPDADTLLELSAGAGDGEARYGGRGMDGTQ
FRRDSWGLRLEKTRLTPWLAKLEAQLYSNRADHVMDNFTLRTFAPGGSMSMPMASNVKRDTRGARVAATL
QWQQDWQLVAGLDAMRSPHEKRSGTPSQPYAGKPWQRDAKFENLGAFAELAWQAQADTRWVGGLRLDRAQ
AWRYPVASGMGGMGGGMGAATGADHRTRPAMPSGFVRWEHTLSPQGASVYAGLGHVQRFPDYWELISPGN
SAANAGNAFATLRPEKTTQLDLGAQWKGQGWQLWTSAYLGMVRDYILFDYAGKGSAVRNVDARTAGLELG
GSQRLGTAWTMQGTLAYAWGRNSTDDRPLPQMPPLEARLGLEYAQGPWSAGALWRLVAAQHRYAKGQGNV
VGRDLGASAGFGVLSLHAGYRLNERLRLTAGVDNLLDKNYAEHLNLAGNAGFGYPGGVRINEPGRTLWLR
ADVKF
>gi|319764968|ref|YP_004128905.1| thioesterase superfamily protein [Alicycliphilus denitrificans BC]
MEGPGRFAMERCMPPEELVQQNWKRRDLPGFMGRAGPLWTRREGDAWAYAILADEAHLNPAGVVHGGALL
TLLDHAISSVAWEACGRLPCMTLQLDTHFIGPVRAGQLAQARAQVVRRTGTLVFMQGDVSVDGRTALAAQ
ALMKVVRTPRGDAP
>gi|319764969|ref|YP_004128906.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MTAAAASWLGPLGRINPRSSAMPAKKQAPASDKKKPAARAVRVRPVPAVSRSIAILRLLGRVGQPLGVKA
IADELALVPSTCLHILRVLVAEELVTWDPATKRYALGNGMISLARSVLDRSGFPQLIQPVLDRLAGRFGV
TAMGVEITAKGTVVVLALSHSNQPFRVHTDVGSRFDTLVSATGRLIAAHGGESWTELRKKFSQIHWDKAP
RFDTWKKEVELARTQGFSVDRDNFMAGLTVVAVPVFTAGGRFAYTVVVVGLSSQLTTVATDLLAQEMMRE
AREISGLLVEGI
>gi|319764970|ref|YP_004128907.1| hypothetical protein Alide_4319 [Alicycliphilus denitrificans BC]
MRKPAIVLAAAACFLAGAPGAHAQGPQAAYPDKPIRVVVAYAAGQGTDIATRYIADLMARDLGQALVIDN
RPGAGGNLGTEAAARAPGDGYTLIMGTNATHVLNQFLYSKMPFDAEKDFEPIGLVGTFPMVLAANAGAHF
ASANDLLKAVRHNPRSADVAMPSTTARLVVELLKERTGAALFGVPYKGSGNAMTDVLGGQLSVIVDTPTA
LRPHLASGKVKAIGVTSARPSGLVPGVRPIAEQGIDGFEVIAWNALYAPKGTPAAVIAALNASLNKALAR
PETRQKLFDLGFEPAGGTPAQLAEFARAERRKWGPLIQAAGIRAD
>gi|319764971|ref|YP_004128908.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MGAALHGLKVVDLTRVLAGPLCTQMLADHGAQVVKVEPPGGDETRQLGPPFDLDGHAAYFSALNRGKRSI
SLDLSTPGGQQVLHRLLEGADVLIENFLPGTMDRWGLGYEQALAAAYPRLVYCSVTGFGADGPLGGLPGY
DAVLQALCGVMSINGDAATGATRVGIPVVDHLTGYVALSAILMALLARARTGQGQRVEATLYDTALSLLL
PHASNWFASQKSPGLLGSAHPNIAPYDKFRARDGELFIGILNDGQFRRFCGHVGLQGLAEDERFASNTAR
LAHRDALRCAIEAAIARHDCGPLCDALMRAGVPSGPVLSVPQALAHPHCAHRQMVVRAGNYTGLRAPMRL
AGTPGAPGGPPPAFAQHADEVLQELGFAAPQRQALHASGAAPVPAAA
>gi|319764972|ref|YP_004128909.1| hypothetical protein Alide_4321 [Alicycliphilus denitrificans BC]
MSTTTQRSFPKITESGLDELRERIGQKIGNTVEPWCYEATRDNIRHYAHGIGDDNPLWCDPDYAAKTHYG
GIVALPSFLFATSRIVSGYVGGLPGVHAMWSGADWTWHKPIRRNDAIHTEAYLKDLIEHQTRFAGRAVQQ
IYHVDFFNQTGDKVAEADSWCFRTERDHAREQGTKYQEVRAREPRRYTDEELGEAYQLYRNEEIRGATPR
YWEDVREGEELPTMFKGPMTVTGFIAYAQGWGGLYIRANKLAWKLIDQHPGVGIKNRFGIPDCPERVHWE
EDFALEVGAPGAYDYGPERTSWLTHHLTNWMGDTGFLHKASCKIRRHNPEGDMLFIKGRVKRKFVENGRH
MVEIEQEARNQDDELSVVGGGMVVLPSRG
>gi|319764973|ref|YP_004128910.1| amp-dependent synthetase and ligase [Alicycliphilus denitrificans BC]
MPRLTDSQSYADAQAYFSAEKLWELFDGDRERLNIAHECVDRHADSGRDALIVAHADGADEVITYRELAE
DSSRFAHYLERRGIQRGQRVAIMLDPSRAFYTAMFGVIKRGAIAVPLFTLFGPDGIRLRVHDCQPALIVT
NAQKMPVAVSATQVPALVYDDAFHASLQGLPPRYAVQTRADDLAVFQYTSGTTRELPDAVKHTHRALVTL
TVAALYGTGLRPGDRFFCPSSPAWGHGLWHGTLAPLGMGLTVGAYSGRFHPERLLQALSRHRFTNMSAAA
THYRMMKNCGKAGDYAYCFGKLSFTGEPIDDDTADFVRRTFGLEVCSMYGTTEIGVVLASYPGAPDFPVK
RGSLGKPVPGTRIEVHDAEGRPCPPGATGQLMVLRKGEWIPTKDLGRVDEDGYYYHAGRADDVIISAGWT
MSAVEIENAILLHPDVLEAAAIGVPDEVRGQVVKAFVVTGRAPGEPFVQEIQELVRSKLSQHEYPRHVAF
VPELPKTPAGKVHRKVLREREAAAAH
>gi|319764974|ref|YP_004128911.1| riboflavin synthase, alpha subunit [Alicycliphilus denitrificans BC]
MFTGIVQATATIAAIEDRAGLRTFTIDFPEGFCQDLAIGASVAVDGVCLTVTEILSPTRATFDVMLQSLN
ITTLGGYAVGARVNVERAARDGAEIGGHPLSGHIDFTGTLAERRELENNLVWRVSVPGPFRRYVFAKGYI
AIHGASLTVAEVNRAEGWFEVWLIPETRRATVFEDKRVGDVLNIEIERGTQVVVDTVREAVEESLGQLRP
AIESLLAERGLSLEDFVRVPTLPKG
>gi|319764975|ref|YP_004128912.1| lysine exporter protein (lyse/ygga) [Alicycliphilus denitrificans BC]
MALHTWLLYLVAALGLSLTPGPNSLLALTHGALHGHHRALYTITGGALGFVCVIALSMVGIGALLQASAH
ALLVLKWAGGAYLVWLGVQLWRAPPLQLEAAADVARASHRGMMFRQGLLAAVSNPKALLFYGAFLPQFID
PQRSLWWQFAIMAGTFGAIECLVEYLLARMAHRIRPALQRFGKRFNRVCGGAFAVMGASLPLTR
>gi|319764976|ref|YP_004128913.1| ATP-binding region atpase domain protein [Alicycliphilus denitrificans BC]
MKRPSTRSLRLRLLAGTLAWMLLSIAAAGWGLRTLFLDHITQQLQAQLVLQLDQLSAVVDWGAGGRLVVS
PMVADPRLERPLSGLYWQIDRLGDEPRAAVARSRSLWDQALVLPPAPEGYPARGYRVLSLQDAQGHRLLA
VARTLQLPDDAAPPLRLVVAGDQALLAEPLQGFTRMLLIALGVLAAGLALAVVLQLQLALRPLQLLRQRL
AAVRAGTAAQLQGPFPQELQPLVTEFNHMLAENADMVQRARTQAGNLAHAVHTPLSVLANAAAQEPGPLG
ALVREQVDAARRQVDYHLARARAAAAVRATGLATPVLEPVRALLRTMQRLHAVRGLSFELAQGAQDAAFR
GEPQDLYELLGNLIDNAGKWARSRVVVDVRREGGQLCFTVDDDGPGIPEAERERMFERGVQLDERRPGSG
LGLDIVRALADTYGGSVQAGQSPLGGARLRLCLPVAA
>gi|319764977|ref|YP_004128914.1| response regulator receiver [Alicycliphilus denitrificans BC]
MRILVVEDEPTLCAQLVQAIAGAGHTVESAGDGVQAHYLGDVESFDAVVLDLGLPQLDGLSVLRRWRAAG
RNMPVLILTARGSWQEKVAGMDAGADDYLAKPFHMEELLARLRALLRRVGEHASAQWQCGPIWLDTRQAR
VLVDGRPLTLTSHEFKLLSLLMQRKGEVLSRTELAEHIYPQDSERDSNTIEVFVGRLRKKLPEGCIETVR
GLGYRLVDVGVGGGA
>gi|319764978|ref|YP_004128915.1| propeptide pepsy amd peptidase m4 [Alicycliphilus denitrificans BC]
MYRRTIVPLAIALGILGAGGTLHADERDHELAREALQQGQVLPLRQVLDKVEREYQGQVLKIEFERDDGR
YVYEIRLLQKDGRMAKLKVDAVDGRVLKIKRKGDF
>gi|319764979|ref|YP_004128916.1| hypothetical protein Alide_4328 [Alicycliphilus denitrificans BC]
MQQNIRRFLVAIAAGTAVTWGIAQAQAPATQAPAAATAPAAAQLTVRDVYDRMEAAGYRDIREIEWDHGR
YEVKASNAQGERVKLYVNATTGAVESTRTRTRR
>gi|319764980|ref|YP_004128917.1| ferric reductase domain protein transmembrane component domain protein [Alicycliphilus denitrificans BC]
MRIKAVLGIWLLVITLAWIAVVPAGPGVQPLFDAQGAATGWWQLRQHALYLTGLWSIGLMALAMVLALRL
PWLERPLGGMDQVYRLHKWAGIGAAVAAIAHWGSKESSGWIKALWGRAGKPEHDAVLPWLTDARGLAKDL
GEWAFYLLLAMVAVTLLTRLLSYRPWRLLHRAMPLLFLALALHTAALMPLSFWALPLGLLMGTLLALGSL
AALWSLAGRIGRARSHQGRIHAVRALGDGGPLAPVEVVCSLPASWPSHRAGQFAFVRFDRAEGQHPFTIA
SAPGSLGRSDQGEPLLRLVIKPLGDYTRTLGQRLRVGQRVDIEGPYGRFDGRGRQRRQQVWVAGGVGVTP
FLALLEARQPGAAPARAHSQPVHMHYCTRDAARDPLLPRLRQLCAQAQPPVRLSVHDDALGQRLTPQALE
ATAGPLDIWFCGPQGLGELLAAHAGGTRAWRLHRESFAMR
>gi|319764981|ref|YP_004128918.1| cytochrome b561 [Alicycliphilus denitrificans BC]
MKPLDNRYHPLLIGVHWLTLALLIAVYALIELRGIYPKGSAAHDLMKTWHFTLGLTVLALVLVRLPLRLA
WRAPPITPAPPAWQHRLATAMHVALYVLLLVLPVLGWLTLSAKGKAIPFFALQLPPLIGADKALGNNLEQ
IHGFIGDIGFLLIGLHAGAALYHHYLVRDDTLRRMWPSRPAARR
>gi|319764982|ref|YP_004128919.1| hypothetical protein Alide_4331 [Alicycliphilus denitrificans BC]
MKSLIPCLFALSLGTTASPALADDDCDAPVGRWQPRDAVLQHAARQGWQVQRLKIDDGCYEIRGQDAQGR
AFKARLDPETLRVVKMKWRDRDHERHRERTRGQDAAPAAPPALGTTPRGQTE
>gi|319764983|ref|YP_004128920.1| hypothetical protein Alide_4332 [Alicycliphilus denitrificans BC]
MSTKPLLTAIAAACALALPALGQARQVTLTTQLKNYGGDGAYLAVYLTDAKGAYAGTLWVAGGKAKYYKH
LSDWNRLSAGDARRLNGVTGASVGAGRTLKVTADLADALIDAGYEIRVDAAVEDMRDSPGEIRLPLTTQN
AGKPQPGRQYIQSLTYQLQ
>gi|319764984|ref|YP_004128921.1| oxidoreductase fad/nad(p)-binding domain protein [Alicycliphilus denitrificans BC]
MTMGWKSVHRWLGLTLGTLAMVLGLSGALLAIDPLQQAWQAPAAAPGLPVATLVQRVQAGMPGVEEIRRL
PSGAIAAFGFSGEQAQALYVDPADGRLLGPYQPSSMPRWVKNLHRALLLGDAGRWAAAGAALAMAVLSVS
GLVLLLRRMGGWRQLAGRVRGTLAQRLHVLAGRVVLAGLCLSSVTALLMSASTLGLVAPGAEPEPEVAST
AVSAAPLPAGKLPLLQDLRTGDLRRLNLPDATDPTDTWQVTTVQGQGWMDRYSGQTLAWQEATAAQRIDD
WARVLHTGESAWPWAVVLGLSGLSVLLFWATGVLIWWQERQGAVRIADNCTLPQADVLVFVASEGGSTWG
FAQALHGALVRAGHRVHSTGLEHFQTTPATRQVFILAATYGEGQPPAHARHALQRIAAQAAGAVPVTVLG
FGDRQYPSFCAFAQAIEQTLRARGWPALLPLECIHQQSSQQFARWGGALAQALGEPLAIDYRPRLPPTTA
LTLVSRRDYPGQDGRPTAILRFSWPRLPWHERLRGHGLARFAAGDLVGIVAPGSAVPRYYSLASGSADGF
LEICVRQWPGGLCSSHLLGLKPGDGTQAFIRSNPGFALQDRPRSALLIGAGTGVAPLAGFIRSNDGRTAM
HLYFGARDPARDYYFEPEIQRWRDEQRLASVQTAFSRVPGGGYVQDVLRRDRERLRALLAGGAIVRVCGS
RPMAQAVAQVLDDILGTLGLSVRELKVKGRYAEDLF
>gi|319764985|ref|YP_004128922.1| apbe family lipoprotein [Alicycliphilus denitrificans BC]
MPKTCSEAGAPLTRLQLHGPAMGTRWSVGCDAPAGMDHKALHAALQAAVAQVDAQMSPYKPDSDLLRLNR
APAGAWIDLPAEMLQVLARALEVCRLSGGAFEPAVGALVDAWGFGAARDAPDAQAIHAARAAHAAPRPPT
HQALELDLPAGRARKHAPLQLDLCGIAKGYAVDRMCDMLQRHGVRHALAALDGELRALGPQADGAPWAVA
LESPLEGRRSAQGVIELQDLAVATSGDYRRFVRVGQTRLAHSMDGRRGAPVNNGVASVTVLAPNCMDADA
WATALLVAGPGEGLALAQRLGLEALWLLRRGGALVQLGLGRFGGA
>gi|319764986|ref|YP_004128923.1| hypothetical protein Alide_4335 [Alicycliphilus denitrificans BC]
MRTTVILATMAMLGATIASPALAADHGRDRGHEQASIRSADGFDHGMQAVPNNAGPQERAHGWRYFSDPQ
ARRAVVISPQGDYYLSRGKGLRWVAGAQTQV
>gi|319764987|ref|YP_004128924.1| hypothetical protein Alide_4336 [Alicycliphilus denitrificans BC]
MATTHPPAYFEDQHERLDAQLQAHLLDVVGADFGAALERLQRWRADLARHIEIENTRLLPHVPQGARWAA
RVYLLEHERIVLLADEYAQRVQAAAAHPLRDEMARRRAVLQLLDSAHALRHVLEHHHEREHQGLAHELPL
DLQAAVWGGPQDGGA
>gi|319764988|ref|YP_004128925.1| atpase, p-type (transporting), had superfamily, subfamily ic [Alicycliphilus denitrificans BC]
MPDRPPAAATPLPGLSSREAAELLARDGPNQLPGSTPKSTAAIVREVLTEPMFLMLLAAGGIYLTLGDRG
EALFLLGFVFVVIGITLVQERRTQRALESLRDLSAPRALVLRDGAEQHIAGRDVVCGDVLVLHEGDRIAA
DALLLDGQLEVDESLLTGESVPVAKLPDDASGQRLYASTVVTRGVGLARVCATAGRTAVGSIGADLAATE
APPSPLQQRSRRLVRALGALALVLATAQVLLGWWWNGRPLLDSLLSGIALAMALLPEEIPVILTVFLALG
AWRIAQLKVLTRRITAVETLGAITVLAVDKTGTLTQNRMAVAELATPALHWRAEGAGELPEDFHRLVEFA
MLATPGDPFDPMEKAIQQFGHDWLRGTEHMHDGREPVFEYALSGEILAMTRVYATSAPYRHLLATKGAPE
AVADLCHLDEARRTAIRAQVEALAESGLRVLAVARGHWAGASGQALAWPPSQHDFDFEFLGLLALADPPR
PEVPEALAQCRSAGVRVVMMTGDHPATARAIARQVGLSDRPEALTGDELQALDDTTLRERLRRVDLCARL
KPAHKLRLVQLLRADGAVVAMTGDGVNDAPALKAADVGIAMGERGTDVAREAAALVLLKDSFAHIVAAIR
QGRRIDDNVRKATRFVFAVHMPVVALALAPTLLHWPALLLPVHIVLLELLIDPACSIVFEAEPEAADIMR
RPARPVDDSPFAPGALLLPMVQGLGIAAVLLAAQAWLQAQGWSVAQGRAVVLGALVPCVLLLILAHRDPA
QPPWRRGPTPNPWLLPMAAAMGLLLAAVLILPGLRQLMGLAGAGLPTLAAVAAVLALCLAWLELLRLAAR
RRVRARPWR
>gi|319764989|ref|YP_004128926.1| 2-nitropropane dioxygenase npd [Alicycliphilus denitrificans BC]
MAALRTPICDTLGIRHPIFGFSHEPDVVVAIAEAGGFPVLGLGRDAPGQIPAIVEAVERRLDGRPYGIDL
MLPAKVPQQADPRGLKAALPPEHVAFVEGLRARFAVKPPGAPSFFITHARSEALFQAQIDAVLQSNARAV
VTAIGLRASLIAQARSRGKLTMSLVGTVRHARKALDMGVDVLVAQGYDAGGHTGPIGTLSLLPQIVDAAQ
GKPVLAAGGIATGAQVLGCIGAGAQGAWLGTLWMAARENHTPPALMRRLIDSGSDDTVISRAHSGKPCRV
VRSAWIDAWDEPQAPAPLGMPYQQVLTGDVFASIHEHGDAALIYEAAGQSVFGITRETTVAAQMEQLVSE
MQAAWRRLGAFVTA
>gi|319764990|ref|YP_004128927.1| hypothetical protein Alide_4341 [Alicycliphilus denitrificans BC]
MKKFIRLAWAAVLSATPLAAAHAQAAYPAKPVRIIVPFSAGGIVDSVARLVGDKLSTMNGQPFIVENKTG
AGGAIGTDFVAKAPADGYTLLLVSPSHAVGPSLQRVTWNPVRDFKAIAGFGIVPNVIVVHPSVQASTMAQ
LVELARKSDPPLTYATAGLGTSNHLSGELLAQEAHIKLTHVPYKGQTDALNDLLGGRVAMMPLTAALAMP
HAKSGKLRALAVTTAKRASALPDLPTVAESANLPNYEVGTWFGLVAPANTPAPVLQKLAADVERVVAQPD
VQAKFASLGMELALQTPAQFDAFVAREYEKWSRVIKQAGIEAN
>gi|319764991|ref|YP_004128928.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MIRDAKQLGTMLQEIRTFLRTECLPIEAQVDAADEIPEPVVQRMRELGLFGHSIPEEYGGAGLTTEELAL
VNIEVSQVATTFRARFGGNTGIASESLVVDGTPEQKRRYLPLLASGEVTGCFALTEPDAGSDATALRTTA
VRDGDHYVITGSKCFITNAPIANLFTVFARTDPQSKGARGVTAFLVERGAPGLSTPPAYRKMGQHGSPVG
EVVLDQVRVHESAIVGGVEGQGFKTAMKALNKQRINLAGLCVGPAIRLVDEMVRRAQTRRQFGQPVGEFQ
LVQQMIAESNTEVHAARALVLETARKRDAGADVTMEASMCKLFASEMCGRVADRAVQLFGGSGYIADNVA
ERFYRDVRLFRLYEGTSQIHLTNIAKRTMAAAAA
>gi|319764992|ref|YP_004128929.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MNPIPLPGLVNPHDLSADRQFSMNLARGLEVLRAFTAATPLLGNREIADRTGLPKPTVSRLTYTLTLLGY
LSRDAHGQKYRLGPGVLSLAHPLLASMQVRQLAKPLMESLARTTGCTVNLGVRDRDQLVYIDSVRADSTN
QHLPDIGTTRPLLPCAMGRALILGCTAAQQTAILNFLKVKNRAEFEQYRPLWEADRKRFAAHGYCHSKGD
WRKEIHAIAVPVRTTLGDSPLALNCTISAHRAPRERLGREVAPLLKEAVHQLEIAQGLR
>gi|319764993|ref|YP_004128930.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MIRRGPASVNRIAPMVRCAKHSLAGLRAGWHKHSPLNASSRVCMTSSSSTTGALAGVRILDMATVLAAPS
GATLCADHGADVVKLELPDGSDALRHMQPIRDGSPLWWKVANRGKRGITLDVRKPRGRALLLSMLPRFDV
LVENFRSGSMDRWGLDIATLHQANPRLIVVRLTGFGQTGPYRARAGFARVFEAMSGFTNLTGEAGRAPLH
SNFPVGDAVAGVFCAFAIAAEIARLRADSEALGCEVDLSATEALFRLLDPLAVEHEQLGQVRHAVGNRTT
YTAPSNMYQSQDGTYFSMVASSQAIFVRLCQALGRPEWLADPRFCTATLRIVHLDALDNGIAEWFRQRPF
ADIAALLEQYEIPFSKVYDIRDIAADPHFQARGAIIRLPDPEYGSLPAPCIVPRVPGRDMPTPRTGPAVG
EHNAQVYAQFGLSDADLADLRAEGVI
>gi|319764994|ref|YP_004128931.1| quinone oxidoreductase, yhdh/yhfp family [Alicycliphilus denitrificans BC]
MNAPFHALVVRQQDGQAHAALETLTAGQLSPGEVTLRTRYAGMNYKDCLSLLGKARIISSYPRIPGIEAV
GEVIASEDAAFSPGDAVLVHGFQTGIDFDGGLSEVMRVPARHLQRVPEGLTPRQAAIIGVPGFTAAMALE
RFEAWGLQPGDGPIAVTGAGGAVGRLAIHILSRAGYRVAALTRDLAQTDALRALGASDVLDACLAFAPPR
PLEKARFAAAIDNVGGSTLAWLLRSMQDGGLVASVGNAAGNTFDGSVLPFIMRRVHLFGIVANATWEERL
RLWHKLAQDWAPDFAALAPDVHEIRLGDVLAHAQRQLAGATSGRTLVAFGEAA
>gi|319764995|ref|YP_004128932.1| acyl-CoA dehydrogenase domain-containing protein [Alicycliphilus denitrificans BC]
MTANACAGRLFGDHFLSRLNVDEQAMVANVRRLARDALGPRAAEVAQRDVFAWDNFRLLAREGVIGTAFP
REYGGTDARQVLRIRIIEELGRVCSASASLVTGADLSCRAIVAGASDDNKARLLPALCRGDIQAAFALTE
PGAGSDVRGLSTTIRREGDDYVINGRKKFITRGTTADWFMVVGRAAHDPSCFIAVLVPRDAAGFAISPEV
GKLGWAGVPISSLQFKDVRAQVSDRLGAEGDGFDLAQDALIRARMGHASMALGRAIGAVEIAAAYMVDRK
LFGKSLGEHQGAQWMVADMVTQLEAARALVHLAAEKYDSGDPDAGIFASMAKLQATDLGMKVVTDALQLT
GGRGYLQDFPLERFFRDAKLNQIGEGSSEVHKTVIGRDAIRRVRTLERHPCLKFESLENY
>gi|319764996|ref|YP_004128933.1| hypothetical protein Alide_4348 [Alicycliphilus denitrificans BC]
MTQHRRRRFTMALCAALAAFGLGTAHASDAFPSRPIRIIVPYPAGGVVDALARVVGDKLSGKYGQPVIVE
NRPGAGGNIGTEYVAKSAADGYTLLMASPSFAVARLFQKSIGWDPVRDFKGIACFGAIPNVIVVPPQVPA
KTLPEFLALTKGGKSPQTYASSGIGTSSFLAGELLVQTARVPLTHVPYKGQPEAFTDLLAGRVDMMPMST
SLALPQIQSGKLRPLAVTTLQRAQALPDVPTVAEAAKLPGYEVATWLGLLAPGKTPQPVLNQLSQDVAAV
LALPDVKAKFRDLAIEGQPMKGTDFDRFVASEVETWTRVVQQAGITPN
>gi|319764997|ref|YP_004128934.1| regulatory protein iclr [Alicycliphilus denitrificans BC]
MCGGHEHVGQPRLFQHAVASIHLPGSVDPHDLSTDRQFAMNLARGVQVLRAFSAQSALLGNRELSDITGL
PKATVSRLTYTLSLLGLLEREAASQKFRLTAGVLSLGHPLLASMPVRQLARPLMVELAQRSGCTVNLGMR
DRSNVVYIDSIRPHDDNAHMPDIGATYPMVASAIGRALIFATPRQERMALLNFLRVQDGETFAKYASALE
EDRKRWEKHGYCHGPGYWRKEVHAIAVPIAQRSGEPALAMNCTLYAHRNAAEYLPKKVVPLLKDAVRHLE
AAQGLL
>gi|319764998|ref|YP_004128935.1| l-carnitine dehydratase/bile acid-inducible protein f [Alicycliphilus denitrificans BC]
MQHTAEPHMTSPSSSNGALHGVRILDMATVLAAPVGATLCADHGAEVVKLELPDGSDALRALQPVKDGVP
LWWKVANRGKRGITLDVRQPEGRDVFLRLIARFDVLVENFRTGTLDRWGLDLAALRRANPRLIVVRLTGF
GQTGPYATRPGFARIFEAMSGFTNLTGEKDGTPLHSNYPVGDYVAGLFCAFSIAMEVARLRADPDMSGTE
VDLSATEALLRLLDPLAVEYEQMGTIRGPAGNQASYTAPSNMYRSRDGIHFSLVASSNPIFKRLCEIVGQ
PAMAADPRFSTNPQRVKHVDELEEVLVAWFQAHDFEELARHLERGGIPFSKVYTVQDILRDPHLKARNAI
VHLEDAECGPLPAPCVVPRVTGYPLPVPPIGPAPGEHNEAVFTQAGLTANDIQRLRARKII
>gi|319764999|ref|YP_004128936.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MIGDGASWARRLKVRHLESFLVLDEAGTLTRAAERLHMTQSAMSHWLAELESVAGTPLVVRGRKVQLTPA
GHLLKRLAVNVLGDISRTGREMQAVAQGRVPRLNVGSVWAGIAGGLPEAVSAFQRTHADVAVSIHDGPFD
NLLKGLETRALDAVIGVLDARAHQPGLEHEVLFEDRVAIVVGQGSKHWAHSDALSFRDVLHEQWVMPPGG
TLTRMQMDAFLIEQGASWLVPRAETASLAMMQALLHKGDYVGVCSESMADYQASIGMFRKIRIESSIRFG
PITVMWNREHVAATLRDFIGCLVAHARGAIAIG
>gi|319765000|ref|YP_004128937.1| hypothetical protein Alide_4352 [Alicycliphilus denitrificans BC]
MPATFKNLSKLLAGAALAAAATTAAWAQGSYPGRPIRLVVSQAPGGSSDTIARLWAEHAGKAIGGTIVVE
NKPGGGGIIAAQSVLNQPADGYTLLYGSVSLMVLNQFTYKPLPYSPEKDFTGVAMLTTVPFVLSTNPATG
IKTLKELTERAKAAPGKLNFASAGLGNSTHLAVELLSKALGISMTHIPYKGEADGIMATIGGQVEVMAPV
YGTALPHIKNGKLNALAVLAPQRTPELPDVPTASELGVKGFDNMGWSGIVARAGTPAAIIEKLNKATEAF
HKSPEVQAKLQSMGVLPVSGPASLVMETTVRDAKAWGPALDALNLSAK
>gi|319765001|ref|YP_004128938.1| gamma-glutamyltransferase [Alicycliphilus denitrificans BC]
MKKQAMVVCPQPEAAESGIDILRAGGNAVDAAVATALAQTVVDPLMCGIAGFGTAAVYLPGAGVHEYFDF
HSPAPLAAREDMWEDLLEGETQDGFGFILKGRVNDIGPQSIATPATLKGLEAMHQAHGRLPWRQVVEPAI
RWAQDGFFVRPGMHAFWIDEPTSGRVGNLERLQYSEEGRALYCRPDGRPKPIGAPLRNEGMARVLRRIAD
EGSHPFYQGDLAREMVEHLQSLGALITLEDLARYEVQRNAPLVGSYRDRTVTTNQPPGGGAMLLEMLNIL
ENFDLGAMEHNSPEYLRTVCEAMKKATSDKDRHIGDPRFFDVPLDQLLSKDMAREAAAQIRAGRRFSVER
VNPGAPVPRDTTHLCVVDGDGNCVSMTHSLAMPSGVITPGMGFLYNGCMGVFDPRPGRAGSIRPGKSRFT
SSCPTITFKDGRLDVVLGAPGGTQIAMGVLQVLLNVIDHGMQMQAAVSAPRFSSTSNAIDVCNRIPRHTT
RALQAQGYQVNRNPYNYTIAWVHGVQALPDGLHGGADPGRDGVAHGLML
>gi|319765002|ref|YP_004128939.1| hypothetical protein Alide_4354 [Alicycliphilus denitrificans BC]
MPPPHPVYHRTPLPPGARRKVGWLMLCWMLIVFSPFVGFALRGKVEERGLVLGLYFALLPLCGLLALRRL
HRAGLRRVPPDVVDEWRHGRLVPPEGAPPVAPPLRYAGPRHWIELRADGVLASRSALLHLNGEGGIAEVI
DSLRVADAAGQYFVPWAAIDGWEIDTDGDGPDFHRLRLRPRGFVLLRRFRAGAGHEAGLLDGVRSIGRVP
VLLKDDLTAP
>gi|319765003|ref|YP_004128940.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Alicycliphilus denitrificans BC]
MDRRTFLAAPLALAGCAPQTPGLEGGFTGIAMDRGHALRDRLEGAAPAVTHRTRVVIAGGGIAGLAAARA
LRLAGVHDGVLLELEDEPGGNSRAGSVGGIACPLGAHYLPVPGDHAGEVQDLLEELGLRRRVAGRWQYGG
DDGRHLCHSPQERLFLHGHWQEGLLPVQGVGESTLAQYRRFSRRVDELARVAPFTMPALKAWMPNRPPAP
IHQALDAITLDEWLAREGLDDAYLRWYLDYCCRDDYGAGSARVCAWAGIHYFASRHGFHAPGDDEGAERE
GVLTWPEGNGWLARRLAALGAGQVRCGTGVLRIAETRHGVEVDALDHASGRIERWQADRCIVALPAFVAA
RVVQPAPAFVQEAARRLQWAPWLVANLRIGVPLADREGAAPAWDNVLYSDPVPGGLGYVDAGHQRLDPGA
LLAGPTVLSYYQALGDLPDGRAQLAERPWTHWRDAILAALAVPHPDLVGRATRMQVTRYGHAMSIPVPGT
LGFLSKIGLQCPPERRWQLSNGERVPLPPTPGTARLLFAHADWSGYSVFEEAFTRGHAAGLAAAG
>gi|319765004|ref|YP_004128941.1| spermine synthase [Alicycliphilus denitrificans BC]
MSAAPEAAGAAPPAPRPTDIALLASVFVIAACGLLYELAAGALASYVLGDSVLQFSTVIGTYLFAMGVGS
WLSRYFERQLPAHFLRIELLVALVGGALPAVLFLANAYAPGAFRVLLYGMVLLVGTLVGLEIPLVMRILK
RNVRLKDLVSQVLTFDYLGALAVSLAFPLLLVPQLGLVRTGLLFGFMNAAVAVWALWLFRRELRRFRAHA
VACAVVVGALLAGLLGAEHITRFAEDKFYQDRIVVSSASPYQRIVVTNGRQGHRLYLNGNLQFAERDEYR
YHEALVHPAMAAHGAPRRVAVLGGGDGMAVREILKYPSVESVTLVELDPAMTRLFTQDPALRRLNGGALA
NPKVRVVNTDAFQWLQQDEGSYDVIVVDFPDPTNFAIGKLYTNSFYALLDQRLAASGYAVVQTTSPLVAR
KSFWTVVATIESVGLAATPYHAHVPSFGEWGFVIASRRPWRLPAALPGGLRFLDLKSLPLLLDFPLDMAR
VPAEVNRLSNQVLVHTYEQEWGAVVAH
>gi|319765005|ref|YP_004128942.1| hypothetical protein Alide_4357 [Alicycliphilus denitrificans BC]
MMGIEWLRPAAFLGSILYALIGVVVFWLCFLIVDKITPYDLWAEIVEKQNRALALVVAAMCLGISIIVAA
AIH
>gi|319765006|ref|YP_004128943.1| transmembrane protein [Alicycliphilus denitrificans BC]
MAESGTQRHYRAPCPGCGAPVEFRSAQSTHAVCSYCHSTVVRSGEVLRRAGRMAEVFDDHSPLRLMASGR
FEGQPFTLIGRLQYKGDEGGWTEWIAWLQDGSTATLSEDNGAYVFMRPAALGREPPDAARLRVGATTAVD
GKPFSVAANLRAQLVAAEGELPRLPPPGQPFQVVELRSGDGEVLAIDYGSSPPQVQRGRAVRLEDLQMQG
LKDESAREEKGRQFNCPHCGAPVQVQLATTKSCTCPACNSLIDLSAGVGGELRHAVQHEPVAPLIPLGSV
GQFEGASWQAVGFQHRMGREPGDDEEFGWDEYLLYNARRGFVFLVDASDGWSLVRPATGAPQYKNGAQTA
SYLGTQYRLASTYTAETDYVLGEFYWPVERGQKTSNADFAATGGRGLLSREQSRGEVTWSHGERIDSSAV
AQAFRLGDKAALFRRQDAGPVAGNPGIGCSTLILAAVVLLVLLVLMSNCAGSSGGGYRSSGGSFGGYTSG
GGHK
>gi|319765007|ref|YP_004128944.1| band 7 protein [Alicycliphilus denitrificans BC]
MALMDFIKKQFIDIIQWTEEGDGTLAWRFPMRDMEIQNGATLVVRESQMAVFVNEGQAADVFGPGTYRLT
TQTLPVLTYLKHWDKLFESPFKSDVYFFSTRQQVDQKWGTPQPIAIRDKDFGAVRLRAFGNYAYRVADPK
LFHTEISGTRDAYPAADLDGQLRGLVLQNISNAIAASGVPFLDLAANQAMFADALARELAPAFARIGLKL
ETITVQNVSLPEELQKVLDQKIGMGMVGGDMGRFMQYQTAQAIPKFAEGGAQGGGVAGDAMGLGAGVALG
QVLAQNLQQGLQGGGAQAAPAAAAVGVRPEEVMATLEKLADLKAKGILTQEEFDAKKTELLKKLV
>gi|319765008|ref|YP_004128945.1| hypothetical protein Alide_4360 [Alicycliphilus denitrificans BC]
MSRIRTVARHNLPALMKTGSYYVIHVCVAALVAYAVTGNLIASLTLSLLEPTVQAVAFFFHEKAWERALR
KRGAAAAQAHTSSKEPAISSAVRSTSRLALKA
>gi|319765009|ref|YP_004128946.1| flagellar basal body rod protein [Alicycliphilus denitrificans BC]
MADTMGTMTPLASIARSGLQAAQLRLDSSAHNVANLGTPGFARQAVDQQAAPAQGGVQARTGRFGQPGVA
LEAEAVEQMAATYAFKASLLVLRTADEMAGSLLDVCA
>gi|319765010|ref|YP_004128947.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MQVKTAPRQRAVLGQLSDMDLRLLQVFKAVVECGGMAAAELELNIGTSTVSRHVKDLETRLGLTLCRRGR
AGFALTPEGQRVYEETLRLLASVRGFLGSIDDIHARMGGQLAVAVFDKTASNPAARIHQAIAAFTAQAPD
VQLQLHVASINAIERGVIDGSYQAGIIPAHRSSQSLVYTDLFGEAMLLYCGAGHALFDAPHDALDWDAVR
AYPFAGLGYHSPNMELSHEARLTRSATGFDQESIATLVLSGRFLGFLPDHYAEGFERQGRMRAVRPDLFR
YDCRFVSLARRSPEPSRAAQLFGRCLLNAHQNGL
>gi|319765011|ref|YP_004128948.1| beta-alanine--pyruvate transaminase [Alicycliphilus denitrificans BC]
MSFAVIDETTTAPRMDAAWLDAHWMPFTGNRDFKARPRMIVGAQGAYYTDADGRKIFDGLSGLWCSGLGH
GRKDVADAIGKAAATLDYSPAFQFGHPASFELANRIKDLTPAGLDYVFFTASGSEAADTALKMARAYWRA
KGQAGKTRLIGREKGYHGVNFGGISVGGMVGNRKTFGQGVEADHLPHTQPPVGSFHKGMPDIDGRALADK
LLDLIALHDASNIAAVIVEPFSGSAGVVIPPKGYLERLREICTQNGILLVFDEVITGFGRCGGWTGAEVF
GVTPDIMTFAKQVTNGAQPLGGVVASKEIYDTFMTTGGPGYMLEFPHGYTYSAHPVACAAGNVVLDILQK
EDMPARVKALAPFFEKAVHGLKGAKHVADIRNYGLAAGFTIAPLPDEPARRPYEIAMKCWDKGFYVRYGG
DTIQLAPPFVSTEAEIERLVSALGDALAETA
>gi|319765012|ref|YP_004128949.1| methylmalonate-semialdehyde dehydrogenase [Alicycliphilus denitrificans BC]
MHNDKSVTSTIGHLIDGQLVTRAERTQPVFNPATGQSTTSVALAGKATVQDAIASAERAFPAWRNTPPLK
RARVLSKLKVLLEENADQIAAMITAEHGKVLSDAHGELQRGIENVEYASYAPELLKGEHSRNVGPGIDSW
SEFQALGVTAGITPFNFPAMVPLWMWPMAVACGNTFVLKPSERDPGSTLFIAQLALEAGLPPGVLNVVNG
DKEAVDALLQDPRVKAVSFVGSTPIAEYIYAEGCRHGKRVQALGGAKNHAIVMPDADIGNAVSAMMGAAY
GSCGERCMAVPLIVCVGDEVAGKMIAGLSAAIGDMKVGPGTDEGNDMGPLVTRQHFEKVRGYVDAGVAEG
ATLLVDGRGLEVPGHEDGYFLGPCLFDHVKPGMKIYQEEIFGPVLGIVRVKTLQEGMDLINAHEYGNGTC
IFTRDGEAARYFSDHIQVGMVGVNVPLPVPVAYHSFGGWKRSLFGDLHAYGPDAVRFYTKRKTITQRWPG
AGVREGAVFSFPSSR
>gi|319765013|ref|YP_004128950.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MKLTPEPSSHREGVHWTVRMNRRNRSAFYVLLFLAMGSHLLATGAPAWAWAALVLHYLIYPQLAYWRACR
SSDQRRAEMHNMDADIVLAGIWLGALGFPLWITFIMCASGCINMVVFHGARGGVRLVVSMAAGIALAAIT
ALPSWHPDTDLRTSLLCMLALGLYLFAFARDGYDRAMAQYQVHAQLRGQFDEIRSLQAQLREQALRDPLT
GLFNRRQLDAALAPALRRCREQGTPLSVLLIDIDHFKRINDAHGHAAGDMVLQALARLLLRHARPQDLAC
RLGGEEFLLVLDDMPVAAAIERAQELRQAFEALRVRSEGEELAATLSCGVAAFPQHADQPQALLACADQA
LYTAKEQGRNRVVMWAAQAAEGTTAAA
>gi|319765014|ref|YP_004128951.1| gntr domain protein [Alicycliphilus denitrificans BC]
MTSKNSATLAIRQLKRSDLVAQEIKRLITEKNLSPGDRLPRESELQAQFQVSKGTIREALKALEVQGLVT
ISTGPSGGGTIAEVPLDRTLQFMQNYLFFQEVTIDDIYTVRQMLEPELAAGAVPHLTEADFEALEHSISC
CDPTQSQEDLLTQRREDVNFHDILAAANPNPFLRFTCELINEMIRQLIVFGNRTPQTEHRRFGEANAQFH
REIVRSARARDAEGVRVLMQRHMQDAASSVKRMKGRIQGRLILDADTLRRPRAAPAAAKRPRKLAVGAP
>gi|319765015|ref|YP_004128952.1| extracellular ligand-binding receptor [Alicycliphilus denitrificans BC]
MQRRHLLQLSALGALPSSLGLVSSAWAQSKDAIQFGCPVPMSGPFAANGKFADLGMKLALEQYGKALGRP
LAYTLLDTEGKPATAVRKVQEAAQQQGARFFAGGILSSEALAMGKEAEKVGGIFITTAGADEITGKDCNS
ATFRWSVPTFGAIEQTVRPLIDAMPKAKRWYTITPQYVFGDGLLSAAKNIFKEKGVEHVGNSYHSLTEKE
FSGYLTNAVAAKPDVLLLLNFGAQSSDTLRQAISFGMHKNMTILIAWASGLEQFESLGADLCDGVYFGAQ
YWHTVDAPLNLDLVKRCQDKFKSNPNYSLAGSYICTKLLIDAIVKAGSVDQKAVIAALDGMKYQGLTGAE
EVRKADHQVLKNYYLLKGKAKAKMKNKDDYVDVISSGKSFLPPEQTGCKLA
>gi|319765016|ref|YP_004128953.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MSIYLLQTINGIGIGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLMGAYFCYQLTRWGWSFWWALLIAPLA
VGAIGWLTEKLLLRHVYAKPHEFHILVTVGLALVVQELVILQWGPLGDSVATPDLLQGVVMWGGFVYPKY
RLFVIGFTAVLAVLLWWVLEGTRLGSAVRAGSESTEMVSLLGLNVFGIFSLVFALGAATAALAGVLAAPI
RGAEPFMGIEALGVAFVIVVVGGLGSFSGALVGGILIGVVQSVMSTLWPEGARIMIYVAMAAVLLLRPHG
LLGRKG
>gi|319765017|ref|YP_004128954.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
MSRHSHLLLALAIVVAMPLFMHSGSLASEVLIYALAAMGCNLLLGYTGLLSFGQGIFFGLGSYTIALLLT
RWPLPMPLALLAAITMGAAGAAVVGWIAIRQRGTYFVMLTLAFAQMFYFIAYSLPGLTGGDNGLLDIPRP
SLAVAGHTLWPLASPWQYYGFVAALFLVAFWLLRRVCDSVFGRTLLAVRDNEERAAAVGYDLRLLKLQAF
VISGAVTGLAGALHAMMTGIAPLSNAEYHTSEMIIVMTVIGGTGNLLASVLGAAFYVLLGDWLSTLWPRW
LLLLGVVLMVVSLGLQRGLWGLGESLWMLARRKRPAPPAPAAAPSANGGQA
>gi|319765018|ref|YP_004128955.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MSAPTASPVLLEAQGVAKHYGKFVALGGVDLKVRANTVHSVIGPNGAGKTTLFHMLTGTKGVSGGRILFD
GHDVTREPDHRRVRRGMARSFQVTSLFLTLPVRENLRLAAQGVAPGAALNCWSPPVGRRSCADTVASVLA
RVGLERHAGTPAGNLSHGQQRRLEVGMALAARPKAIFLDEPTSGMGIDDLDDMKRLIQGLKDEHTVVLIE
HNMGIVMDISDTITVMQQGRVLAEGLPHEIRADERVRSAYLGNMITGGKA
>gi|319765019|ref|YP_004128956.1| abc transporter related protein [Alicycliphilus denitrificans BC]
MSRPAAPKVHSTAAHQREGTPVPVAPLLSVEDIHAHYGKSHVLQGISLRVGDGELVTLLGRNGAGKTTTL
KSIAGVMQPTQGQVRFGGEATHRLATHQVAQRGICLVPEHRGIFKLLTVEENLMLAQRKKSPWQLQDVYR
IFPRLKERRGNGGGQLSGGEQQMLAIGRALMNAPRLLMLDEPVEGLAPVIVEEIVAQLKTIKAAGVSILL
VEQNLEVCTQLADRHYIIEQGVVAHEATNAEFLADDAVKDRYLGVGLV
>gi|319765020|ref|YP_004128957.1| amidase, hydantoinase/carbamoylase family [Alicycliphilus denitrificans BC]
MDMQSSPIAALRIDGARLWQSLMDLARIGGTPKGGVCRIALTELDRQGRDLFVQWAREAGCSIRVDAIGN
IFARRAGTDDSLPPVMTGSHIDTQPTGGKFDGNYGVLAGLEVVRTLNAAGIHTRAPIEVAVWTNEEGSRF
VPVMMGSGVFAGAFTLEHALAQRDAQGVSVGEALAAIGYAGESGPAHAVGAYFEAHIEQGPVLEKHQRVI
GVVQAALGQRWYDVTVQGMEAHAGPTPMELRRDALLAASRIVAEVNRIAVERMPHARGTVGSLEVFPNSR
NVIPGRVKFSVDLRAPDDAQLQDMDAALRAACARIAAECQVQAEVEQVVYFPPQPFTPHLVQAVRAGAAE
LGYSSMDAVSGAGHDAVYVARVAPAAMIFVPCADGISHNEIEDAEPAHLEAGCNVLLRAMLAQAEIAA
>gi|319765021|ref|YP_004128958.1| microcystin lr degradation protein mlrc-like protein [Alicycliphilus denitrificans BC]
MKILIARLNHETNTFSPVPTPIEAFSPTHGEEAYRANKGMRTAMAAFIELAEGMGATLVTPVSAMANPSG
PVHAAAYDELTRRIVDAAPGCDAILLDLHGAMVAEHTCDGEGDLLARVRAAAPGVPVGVALDLHGNVTGK
MVQNADVMVGFKTYPHIDMYETGEHAGRLLLQMLRGEARFRVCWHRLPLMSHTLRSTTLEGPMRDAVENA
RALEHSGIPAVSVFGGFSLADIEAPCMSVVATCRIEDAPATQAAVDGLARQIWERRAEYVYRSEPLADSL
RRARSLAEGATKPVLLLDHGDNCMSGGTCDTMDVLQAALELGLTGIAVGPLCDPEAVGRLIAAGKGAEVE
IDLGNKVPLTSIGLAKQPLRLRGTVRAVSDGGYTVTGPIYTGQRCHMGRTVCLDTGAAQIVVTEQTHEPW
DLGVFHCVGLDPTRFRFLLLKSRMYCRPVFVPLSAGLVECDSPGATTSDYARFPFTRVRRPVFPLDAP
>gi|319765022|ref|YP_004128959.1| malic protein nad-binding protein [Alicycliphilus denitrificans BC]
MPENTAPDTTDKRALLRRAALEYHEFPQPGKITIAATKQMINQHDLALAYSPGVAAPCEEIVKDPAAAFR
YTARGNLVGVVTNGTAVLGLGHIGALAGKPVMEGKGVLFKKFSGIDVFDIEIDELDPDKLVEIIASLEPT
FGGINLEDIKAPDCFYIERKLRERMKIPVFHDDQHGTAIVVGAAILNGLKVVGKDPKQIKLVTSGAGAAA
LACLGLLVKLGIPRENIWVTDLAGVVYEGRTELMDEDKAQFAQKTGARTLSEVIDGADVFLGLSAGGVLK
QDMVRRMAARPLILALANPNPEISPEDVKAVRDDAIMATGRTDYPNQVNNVLCFPYIFRGALDCGATTIT
TEMEIAAVHAIAELAQAEQSEVVAKAYAGEPLAFGPEYLIPKPFDPRLMMKIAPAVAQAAADSGVAQRPI
ADMDAYRDHLQTFVYASGTTMKPIFTAAKMAAKKRVAYSEGEEERVLRAAQIVVDERIARPTLIGRPTVI
AERIEKFGLRLKEGRDYDVVNVENDHRYRDFWQTYHRMTERKGITVPIAKIEMRRRLTLIGTMLLHKGEV
DGLITGTWGHTTHHLQYIDQVIGKRAGVDTYACMNALMLPDRQIFLVDTHVNYDPTAEQLCEITIMAAEE
MMRFGLKPKAALLSHSNFGNSNQPSAVKMRQTLELLRVQAPWLEVDGEMHGDVALDGKARVALMPHSTLA
GDANLLVMPNIDAANISYNLLKTAAGGNIAIGPVLLGAGAPVHILTPSATVRRIVNMTALTVADANASR
>gi|319765023|ref|YP_004128960.1| guanine-specific ribonuclease n1 and t1 [Alicycliphilus denitrificans BC]
MLKAVAIPAYKAFVACALGAAVVLAPAGASARQASEAAAIPPIALADLPPQGRATYALIREGGPFPYDKD
GSVFGNRERLLPAKKRGYYREYTVRTPGVRSRGARRIVCGGAPRTPDACYYTSDHYSSFREITQ
>gi|319765024|ref|YP_004128961.1| barstar (barnase inhibitor) [Alicycliphilus denitrificans BC]
METPLRKDQETLLRGVRPNIVQSIRAFRVHDLQETARVLGHHFLYANLAHAQSKQDILELIATQFTFPAH
FGKNFDALYDCMTDPLHKSGPQPGFIVVLEQIPTTAKFDKEAREQLLDIFRDAADYWSDRKIPFRCFYSF
L
>gi|319765025|ref|YP_004128962.1| dimethyladenosine transferase [Alicycliphilus denitrificans BC]
MKHIPRKRFGQHFLSDPGIIDAIVRAIAPRPGQHMVEIGPGLAALTQPLVERLGRLTVIELDRDLAARLR
QHGQLDVIESDVLKVDFTQVAQTLAAPKIRVVGNLPYNISTPILFHLMAHVQIIEDQHFMLQKEVIDRMV
AAPATAAYGRLSVMLQWRYAMEDVLFVPPGSFDPPPRVDSAVVRMLPHARPAAVDEALLSELVQVAFSQR
RKLLRHTLGRWLEGHGYAGGFDTQRRAEEVPVAHYVALAQELAPA
>gi|319765026|ref|YP_004128963.1| sura domain protein [Alicycliphilus denitrificans BC]
MNFLHAMNHRASTLALACLTAAAVLAPAAQAQGLRPSGSAGLQRLPSSTATLLPPAGAASPAVRQADYIV
AVVNSEPITNNEVRQRAERVAQQLSGQGAAMPPHEVLVKEVLERLILEKIQVQLAKEGGIKVDDYAVNQA
EQNVARQNDVSVDEMHRRLAADGISKERFREELRNQLLALRVRERDVESRVRVSDLEVDQYLQDQQKTAG
PGKMEINLGHILVKVPEGASPEEVARRAARAQEVLDKLRAGGDFGVLVQEYSDVPEGSGGGLLGLRPLDR
YPELFVTAVQQAAVGSIVGPLRSPAGFHILKVVDRSQGGVPTMAVQSHARHILLRVGSGLSERQAAERLE
DLRQRVLRGQADFATLAREYSQDGSAKDGGDLGWAGPGRYVPEFQEALNALRPGEISQPVVSRFGVHLIQ
LLERREAKLTQREQRDMVRDAVREKKLDEAFTTWIQEARARAYVEYREAPQ
>gi|319765027|ref|YP_004128964.1| organic solvent tolerance protein [Alicycliphilus denitrificans BC]
MDRSLLPHALPATMSAPPARRAPLARLAALMLCGVPLAALAQAGGSASEQAEAPPALRSSPRLQETLPDD
VRSQLPVFVRGDRVTGQPDIRATVEGNAELRRGDTVIHADEMEYDVADDRAKARGHVHINRAGNLYDGTL
LDLRVDAFSGFFSDARYRFLETAAHGEATRVDFVDRDRSVVHNATYTTCERTDEASWKPDWIIHAKTIRL
DRAEDVGTAEDGVLEFKGVPVLPMGNISFPLSERRKSGLLPPTIGLDSVSGVEYIQPYYWNIAPNRDATI
TPLVMSRRGVGLAGEFRYLEPRYSGELNASYLPRDQLRERDRWAYGVRHRATLGTPAGDVGLNLNVRRVS
DDDYWRDFSPRTSGLAGMGMGGNQLTQRLLPGEASLNWARGEHQLSLRTLKWQTLQDVTAPITPPYDRMP
QLHWRYAPAQLGGGLDATVEADYTSFEADRRYYAQPNGRRSYAVAQISRPFLAPSGFITPRLQLHATQYE
FDEPLSNGQRTASRTLPTFSLDSGLVFERDARFFGGDYLQTLEPRAFYTYTPYRDQSMLPVYDTAANDFN
FASIYTENAFGGNDRIADNNLLTLGVTTRLIHPETGAEAARLGVAQRLRFADQKVTLPGGTPASERLSDV
LLGAGINWTPQWGLDSTVQYNPKTGRSLRTTVGVHYSPGSYRTVSAAYRMQKVTDLITVPSEQVDVGWQW
PLSDLWGGGRDGKERAGRWYSVGRLNYSLQDRKLVDTVVGLEYESCCWIGRVVLERLQSSQITASTRLMF
QIEFVGFSRLSLGANPLAILRQYVPRYKLLREDVAIPSRFSQYD
>gi|319765028|ref|YP_004128965.1| aminoglycoside phosphotransferase [Alicycliphilus denitrificans BC]
MSHPSPISPAAVPGDARAVHWNDPARQAAFEAWLAPLAAAQGLLPASLRPASADASFRRYLRLDAQDGAS
RIVMDAPPDKEDCRPFVHVQGLMRAAGLPVPQIHAWDEAHGFMLLSDLGAQTAIERLDPANPQAAHAWYL
QAVDLLIDWQRASRPGVLPAYDDALLRRELLLFPDWYVARHRQATLTDAQQATLAKAFDAIVAQNLAAPR
VFVHRDFMMRNLMVGEGGRLGVLDFQDAVHGPVTYDIASLMRDAFISWEEDFVIDITVRYWEKARRAGIL
GAASESGWGADFGDFYRAVDWMALQRHLKVAGIFARLTLRDGKPKYLQDAPRFIAYIRQTAGRYRELSPL
LRLVDEIEGTQAAMGYAFGRV
>gi|319765029|ref|YP_004128966.1| hypothetical protein Alide_4381 [Alicycliphilus denitrificans BC]
MPRFHCPLSLAAGARIALPPTAARHVQVLRLQPGDALTLFNGEGGEWTATVARMGRSDVEVEVGAHAPVE
REAARAVHLVVGMPANERMDWLVEKATELGAASIQPIAAARSVLKLAGERAAKRQQHWQAIAVAACEQCG
RNRVPPVAAPLLLSDWLRQSAPEGARLVLSLRDGARALREAAGGAGAVWVLHGPEGGLTAQEEDAALAQG
FEPASLGARVLRAETASVAALAVLGLA
>gi|319765030|ref|YP_004128967.1| hypothetical protein Alide_4382 [Alicycliphilus denitrificans BC]
MHVEMMDEGAELGALADFFRDDAQFGDAAADAPLLGRLARQQALTQALSGLFHGPAALVQLRVWVFLQLA
SQGDAQWPRERIDELFHALRPEALETVLKRLRDVELLAWDETQRAYALPPLAQRVAALLAPLAAEQPGDD
EDGGELAALLGQVVGANQLGSLDAGQVQMLHAQLARLHGEFADAIASGSEFRLREARKRYDRAALLIDRA
SEAISAIIGNAQGHVLLERAARGLGQAQSRLLAMASQFNRALQQVDRQRVTLGTTGITSTDVKRWLQAAP
QLHALLQGALARPTQLATIAPHELLDVAEAEFERDRPAQPQAEDLPAAQAAPTGTLAAVALPRELDDLNR
LFEAWAAGPGDEARTVAQALLGPRPAATRYAQLAYKAQLMPLLGDPQAAVLPGATGQLARQPWRVQWQPE
AERLDHDQVELLTLGVLMKEETNG
>gi|319765031|ref|YP_004128968.1| hypothetical protein Alide_4383 [Alicycliphilus denitrificans BC]
MDDAALLIAELLTRRWLPRSHRLVKRALVDAELFAQVEQRLAQSGLRWMDSIYADHVSVALLPAAAATVL
GEAGANANNNLDLPRDAQALLVVLWALIVLPKRERQTSRTLDADAGQDDLFPGAKPLPSARSASPVLSYK
ALLEDYGPQLGKKLRLDANLKLLERHGFILRRQDEIAEGPLLDVLLDYDVLAPRILDGALADVLARERAV
EEESESNQAPAPSSQALAAINTEA
>gi|319765032|ref|YP_004128969.1| smc domain protein [Alicycliphilus denitrificans BC]
MFHLQTLELVHWDYCQRVSLPLDASIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYRTYARHAGAQTA
WLRAVVDNRPQGRQSSSRPFARRLLYSDQVTLACRIDRNGGDWQRRYCLLEGDASIERLVDTPEKDLGFM
GVEAWGRMLAAAGLSPAIARVLSLEQGQTDRLCEFSPRELLRLVFDVFGDQQVLDAYDQAREHQQQLARE
MAQAERELDHSRAQLSELHNRVTSYKTWQLRLAERERLATEVLPVLAWWGEREQLARQSRELRRQKAQHR
AALAEQAVQNKRLLHLLQESAHAQQQAEQLRGERDQARGQLDAATRHEAPLEQLAKREQELLALVDKGSN
ADDLQAHLAQLQGQEAALQDERGQLTQRRKLAAAQLAALEGLSLPPLPPEVQRFRKTLASQGIGHRFVAE
VVEVVEERWRAAIEGVLRGHRWVVVLDKSQDLAEAWEVGERERYRHYIVEPGSVALKGEPGTLLEHVKFT
APVPRWLVQQLQNLRCVADPREGKRLGGTWITPQAYMHDGRGARSMWVEAHEHQFGAAAVHARRSAAERE
LARIDAQLAPVLDELMALKRQIADTKNALAGHSAAEELVRRSEEFAQARGDLPAARQARIAAAQLWQKLE
QESTRAHDRHRAFADEHKRLEGHLQRARGDSERAAQDWSARRRQHAGAVARSQQQRAQFPARWIAPGAIA
ALVGEYMNDTQARLRLHAVEQELEQGSWEQDATVEERHRRMDVTVREQAASLSDHQVKNAQAATAVLNAR
ESYIEVLRSTVRRYRKNIQELGQLAGVEVAADLPLLENDDTVLAQAGLKVHFAFDGKGSIGLNDGEASGG
QQVIKSLILLVGLLKDEESGSGGFVFIDEPFAHLDVRNIQLVGHFLRSTRAQYVLTTPITHNLEVFEPAE
ITLVTSKKPRDARWAPPIAVAKRRGAPELRPMMAA
>gi|319765033|ref|YP_004128970.1| peptidase m20 [Alicycliphilus denitrificans BC]
MTARLPSAALDAALALDRVSRAWDEDILQQLTDYIRIPAKSPGFAPDWRELGHIETVVRNAAQWVEAQKV
AGLTLEIVRLPGRTPVLFFEVAATQPQLAQTVLMYGHLDKQPEFEGWRADLGPWTPKYEDGKLYGRGGAD
DGYTVYASIAAVQELKRQGVAHPRIVGLVETCEESGSADLLPYIDALRERLGDVGLVICLDSGAGNYDQL
WLTTSLRGMASGTLKVEILTEGVHSGDSSGLVPSSFRIMRQVLDRLEDSATGRLLPASFHCEVPADRLAQ
AKATAAILGEEVYKRFPWAHHDCGGSTVFALPTTTDPVQALLRRTWEPTLSVTGAEGFPALKDAGNVLRP
YTAFKLSLRLPPLVDAVASAQELKALLEDNAPYQARVTFAPDHAASGWNAPAIDPWFAQALDAASQAHFG
APCGYIGQGGTIPLMNMLSQGFPSAQMMVCGVLGPKSNAHGPNEFLHVPYAKRLTAAVAQVIAAMPV
>gi|319765034|ref|YP_004128971.1| diguanylate cyclase [Alicycliphilus denitrificans BC]
MLPLDVPTMLLMTAASSLTMAGSFAAVRSQRREGSQLWALGLLLHTATYMLYVLRGTAPDWASIVLSNTL
LSGTFALALAAVCQFQGRALPWQRMLLPVLAMGALFAVFVDDYRARIMVTGVVLPLQIGMVLWALWRPQP
PARGRGVLLLTLSLGLEVVLLGVRGVLAAAHAMPLDGLMRGGPLQSFTFMAVFVVVILASLGFILMTKDR
ADADNRYFATHDELTGVANRRALVQALDRDVAHAVRSGEPYALLMLDVDHFKSVNDGHGHRAGDQVLCHV
AAILRARLRAQDLVGRYGGEEFMVLLPGTPARGAAGLAKTLREAVEQTPCEYGGRVIPVTVSIGVCSARL
GSGDTWDRLIHAADQALYAAKAAGRNRVECVALAQEPPRTRAAPA
>gi|319765035|ref|YP_004128972.1| hypothetical protein Alide_4387 [Alicycliphilus denitrificans BC]
MNKLSIQDRVAILNILSEGAGINAAARITGKSKNTVLKLLAEVGQACAAYQDRVMVNLPCKRIECDEIWS
FVGAKQKNVRDDDEAHAHYGDCYTFTAIDPDTKLMPCWLVGVRTARCAEDFMADLAPRLADRVQLTTDGL
QVYVDAVEKAFRGNVDYGMLNKRYAGEAMQKEAKRRYSPATMTSVEKIRVFGNPAEQDISTSIVERANLS
MRMGMRRFTRLTNAFSKKLENHMHAVSFYFMVYNFVKIHKSIKTTPAMEAGVTDFLWNMEDIVLMSETNV
>gi|319765036|ref|YP_004128973.1| hypothetical protein Alide_4388 [Alicycliphilus denitrificans BC]
MEEEPKGRAKGGAARAAKLSKDERSAIARKGGLARQAKMDGPKLPNAEYKGVLKIADLEIPCFVLDDGRR
VISGRGMTTAIGMKGRGQGIARIQGLKALKSLENNNLPVAIGSPIQFTGGSPKVGMPSDGFEATVLQDLC
EALLNARDAGALITEQEKRYGQFADMLVRAFARVGIVALVDEATGYQAVRPQDALQKYLEMLVRKELAAW
VKKFPDEFYENIYKLKGWPWPGMGKNRFSVVAHYTRDLVYNRIAPGLLVELEKKAPKNDKGARKAKLHQF
LTEDIGDPMLAQHMHSLVMLQRLAIANGQGWNKFVKTVDQVLPRRGDTLELPLDDPNS
>gi|319765037|ref|YP_004128974.1| translation initiation factor if-2 [Alicycliphilus denitrificans BC]
MPKKDFSQVAFDVVQRATGEKPKQQPKPKKETAPKETKGASKKTGDKK
>gi|319765038|ref|YP_004128975.1| methionine biosynthesis protein metw [Alicycliphilus denitrificans BC]
MSDHATMQAIARLVPQGARVLDLGCGDGALLDLLQRTRGCTGYGIEIADANVLACVRRGVNVIQLNLDEG
LAMFSDNSFDVVLQIDTLQHLRNAETMLRETARVGKSGIVAFPNFAHWPNRLSVLRGRMPVTRRLPYQWY
DTPNIRVGTYKDFEVLAGKNKLRILDAFGLQDGREVRFLPNALAGTAVFHFEHD
>gi|319765039|ref|YP_004128976.1| homoserine o-acetyltransferase [Alicycliphilus denitrificans BC]
MSFIATPQSMHFAEALPLSSGASIRDYTLAYETYGRLNAEGTNAVLVCHALNASHHVAGVYEGQPRSEGW
WDNMIGPGKPVDTNRFFVIGVNNLGSCFGSTGPMHANPDTGEVYGADFPVVTVEDWVNAQARLLDRLGVG
QLAAVMGGSLGGMQALSWTLQYPERMRHAVVVASAPNLTAENIAFNEVARRAIVTDPDFHGGHFYRHGTI
PKRGLRIARMIGHITYLSDDVMNEKFGRQLREGIDLKYSTQDIEFQIESYLRYQGDKFSEYFDANTYLLI
TRALDYFDPALRYGGSLAQALAVARARFLLVSFTTDWRFSPRRSREIVHALLENRRDVSYAEIDAPHGHD
AFLLDDVRYMGVVRSYFDNIAQEQQP
>gi|319765040|ref|YP_004128977.1| hypothetical protein Alide_4392 [Alicycliphilus denitrificans BC]
MEAFLVSTAIVTLAEMGDKTQLLSLVLAARFRRPWPIVLGIFVATLANHALAGAVGTWVTTVLGPQVLRW
VLGLSFIAMAVWMLIPDRLDDDGTGAGPRLGVFGTTVLAFFLAEMGDKTQVATVMLAAQYSAYLWVVAGT
TLGMMLANAPVVWLGDRLVKKVPIRVVHLVSALIFLVLGLLALFAPQATPLA
>gi|319765041|ref|YP_004128978.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
MGNKLYVGNLPYSFRDQDLEQTFSQYGSVQSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGAHGQNYG
GRDLVVNEARPMEPRPPRSGGGFGGGGGYGGGRSGGGGYGGGRSNY
>gi|319765042|ref|YP_004128979.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
MGNKLYVGNLPYSVRDQDLEQAFGQFGVVTSAKVMMERDTGRSKGFGFVEMGSDADAQAAINGMNGQSLG
GRSIVVNEARPMEPRPPRSGGGGFGGGGGYGGGRNTGGGGGRGEGGFRSPYGSGPRGGGGGGRGGYGGDR
NGGY
>gi|319765043|ref|YP_004128980.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC]
MHDPRPLVFITGASSGIGQALAERYHRAGWRLALAARRDSEMKSWTEARGMGAGSYEIYGADVSQPDSII
AAGQACMERQGLPDVVIANAGISVGVDTAQRADIDTMARVFATNNLGMAATFHPFVAAMARRGSGRLVGV
ASVAGIRGLPGHGAYCASKAAVISYCESLRGELRSSGVRVVTICPGYVDTPLTRENRYAMPFLMRPEAFA
DKAFRVIESGASYRVIPWPMGVVAKLLRLLPNAWFDRLLQGRPRKHRQGQGRAS
>gi|319765044|ref|YP_004128981.1| hypothetical protein Alide_4396 [Alicycliphilus denitrificans BC]
MMVRLRRAWERLSIYLPVLLMGLLALGTWWLVRNAPQPPQPAQERPVRHEPDYFMRDFAVRNFDATGRLQ
SEIRGTLARHYADTDTLEIDQARLRSVSVDGRVTTASANRALSNADGSEVQLFGNAIVVREPLERAGQAP
LPRLELRSEFLHAWTNEERVRTNQPVTLKRGVDIFTADGLDYDNLDQILNLRGRVRGTLLPATPARPAAK
PVR
>gi|319765045|ref|YP_004128982.1| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase, yrbi family [Alicycliphilus denitrificans BC]
MDARTESPPLLPALQFDPALLLRAQDVRVAFFDVDGVLTDGGLYFSENGETLKRFNTLDGHGIKLLQQAG
ITPAVITGRDSPALRLRLKALGVVHARFGTEDKRPAAEAILAELGLAWPRAAAMGDDWPDLAVLRRVAFA
CAPAQAHAEVRAVAHHVTAAAAGAGAAREFCDLLLIASGRYASLLAAHAA
>gi|319765046|ref|YP_004128983.1| kpsf/gutq family protein [Alicycliphilus denitrificans BC]
MPTATAAFPSFNAEQALRLGRETFDIEAAALQGTGGRLGAVFVQAVQRVLATSGRVIVMGMGKSGHVGRK
IAATLASTGTPSFFVHPAEASHGDLGMVAGGDLVLAISNSGESSEITVLLPMLKRQGVPLIAMTGGLQST
LARHADLVLDCSVEREACPLNLAPTTSTTVQLAMGDALAVALLDARGFRPEDFARSHPGGALGRRLLTHV
RDVMRTGGQVPRVPPQADFSTLMREMSAKGVGASAVVDEAGCPVGIFTDGDLRRRIEAGADLRGMRAQDV
MHASPRTIAADALAADAAQAMERHSITSVLVTDAQGVLVGVVHIGDLMRAKVI
>gi|319765047|ref|YP_004128984.1| sodium/hydrogen exchanger [Alicycliphilus denitrificans BC]
MSSLALTLLYLLAAVLGVVACRSLRLPPMMGYLAAGILIGPHALALTQNSEGVRHLGEFGVVFLMFTIGL
EFSLPKLRAMRRHVFGLGLLQVLASMLAFMACLLLLARLAGGVWDMGWQTALALSGTLAMSSTAIVVKLV
SERGELESEHGRRVLGILLFQDLAVVPMLVLVPALGSSPERLLLALGLALLKASMLVGVLLVGGQRVMRW
WLTLVARRKSDELFMLNLLLVTLGLAWLTELAGLSLALGAFIAGVLVSETEYRHQVGTDIRPFHDVLLGL
FFITVGMMLDWHILLERWALVLALLAAPLLIKTAIIVALARGLGATTGVALRTALYVAQAGEFGFVLLSL
MQEHALMQPALMNPVLAAMVLSMLATPFLIQYSNRIVMKLVASDWLQQSLNVTTIARQAINASGHVLICG
YGRCGQNLARMLESEGIPYMALDLDPDRVRQAAAAGNSVVFGDATRLQALKAAGLARAAAVAVTYLDTPA
ALKVLAHARTHAPHVPVVVRTQDDSQLDRLQAAGATEVVPEAIEGSLMLASHALALVGVPMRRVLRLVQD
QREARYGLLRGYFHGADDDTPTERDQERLYSITLPPGAAAVGAQLAHLPLHAIGAHLVNVRRTSGRMSTP
DDAMPLAEGDTLVLSGHPTALSLAEEKLLRG
>gi|319765048|ref|YP_004128985.1| adenine phosphoribosyltransferase [Alicycliphilus denitrificans BC]
MHSLSVTDYLRQHIRTVPDWPAPGVQFRDITPLLQDPKVFRVMIDAFVHRYMDRAMRPDVVAGLDARGFI
LGAVVAYELNVGFVPIRKKGKLPFTTVEETYELEYGSATVELHADAVKPGDRVLLIDDLIATGGTMMAGK
KLLEKLGATVMEGAAIVDLPELGGSARLRASGLPLYTLVDFSGR
>gi|319765049|ref|YP_004128986.1| hypothetical protein Alide_4401 [Alicycliphilus denitrificans BC]
MSLFSWFTRKSKPQAPRQRQAHTMPAPLAANGAGSAAPGRNGNGKPLLEPSASQDPAAARKNERAERREL
LYTTVRDAMVRAGVLSAGYKFKVLSLDQRGAQFLVMMDLAQEYSSDMVRLGEIEALITQSAKSRFGIVVP
AVYWRINDQIMVGVSMGPAASAARPQASRVPEFTAPAAQASPTLSPPRPAAARQHGVPPASRPAPLVPPI
APAAPPRAATGFEPIEADEVAAFKQALVHAAAARAPAPAAEPGTATRSGPLLPKSTGSTGFEDTVMPTQD
APSSDLSSTQYGDLR
>gi|319765050|ref|YP_004128987.1| cyclic nucleotide-binding protein [Alicycliphilus denitrificans BC]
MNTTPFPRVDLTGLIEAISQTTADDGMNNVLSREQWGLLSSYLQPVNLPAGQVLFAQGTNDRTLYLVESG
SLSVHSENENQRLRLAIVGAGSVVGEGAFFSHRPRSATVQASAPSKLWSLTALRFSELANRQPVVALQLA
MAVGAVLAKRLANRRRRVAAT
>gi|319765051|ref|YP_004128988.1| tRNA modification gtpase trme [Alicycliphilus denitrificans BC]
MLARHQDPIAAIATAPGRGAVGIVRVSGRGLAPFVQGLLGRSLQPRQAHYLPFPDAAGRSIDQGLALFFP
APHSYTGEDVLELQAHGGPVVLQLLLARCLEAAQAVLPRLRLAEPGEFTERAFLNDKLDLAQAEAIADLI
DASTEAAARSAGRSLSGAFSQEIHGLRDALVHLRMLVEATLDFPEEEIDFLRKADARGQLSNLQQTLAAV
MQRASQGALLREGIKVVIAGQPNAGKSSLLNALAGAELAIVTPIAGTTRDKVQQTIQIEGVPLHIIDTAG
LRESADEVERIGIARAWDEITQADAVLFLHDLTRLDAPEYIAADALIASTLVQKLSESVPVIDVWNKTDA
AARPAPAATAGRAAVQLSARTGQGLDALRRELLRVAGWQSAAEGVYIARARHIEALRAVDAHLMEAAAQL
ESTGPALDLLAEELRLAQSALNAITGEFTSDDLLGVIFSSFCIGK
>gi|319765052|ref|YP_004128989.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC]
MKPTTILAAALAACALAGTAAQADTLKKIADTGKITVAYRESSVPFSYLAGSGGPVGFSVEITNAIVDAV
KKQLNKPGLKVDMQAVTSQNRIPLLQNGTIDIECGSTTNNAVRGKDVQFAINYFYTGTRLLVKKNSGIKN
WADLARKKVSSTTGTTNAQVIRKYSKDNNLDFDIVLGKDHDDSMLLVDAGRAEAFAMDDILLFGLKNNAR
NPADWDVVGDALQVEPYACMMRKDDPQFQKLVNGVIGSMMKSGEFEKLYTKWFMSPIPPKGQVIGLPMSQ
ELKDNLTAQSDKPAM
>gi|319765053|ref|YP_004128990.1| fad dependent oxidoreductase [Alicycliphilus denitrificans BC]
MGAGIVGLATAYELQRQGMQVTVVDQARPGAGASGGNGAQLSYSYVQPLADSGIWAQLPKLLLSPDSPLK
LRPRWDPHQWRWGLDFLRACNRRASERGTATLLALAARSRQGFERMLAAERLECDFSRTGKLVLYATQAS
LDDARRQLELQRAWGCEQEAVTPARCVEIEPALAHYAAQIAGAIHTPSECAADCLQVCQGLHALLQARGV
RFVLGTRITAVTRSAGRIVAAQTDAGAIEADAFVLALGSGSHALARTLGFALPVYPLKGYSITFDAAAGP
GAAPRVSVTDAARKVVFARLGRRMRVAGMAELVGYGMDIPQARIDSLCAATRALFPHSGMGRDLQPWAGL
RPATPTGLPVVGRHARAPANLLLNTGHGALGFTLAFGTAAAVAEALAG
>gi|319765054|ref|YP_004128991.1| lysr substrate-binding protein [Alicycliphilus denitrificans BC]
MRLRHIEVFNAVMLTGSVSAAARLMNVTQPAVSRILAHAELQLGFALFQRVKGRLVPTQEAQTLYPQVQQ
LFAQLDEVQRLAASLKNPQRRDELRILTVFALSVELLPRALRVFRAQYPGVAVTIDALHSPQIVAALLRQ
EADLGFVFTAAAHPSLVQEHLADARMLCVAPRGMLPPALAAGGSIALSDLAQQPLVRLAASDPIGTLVNH
ACREAEVSLQAPYTVQTYHAALALAHHGQACALVDACTAASAERDKVDVLAVQPPIAVPVQALRPAHRPA
SLLAEAMLRCMRTVVVQALAE
>gi|319765055|ref|YP_004128992.1| aspartate racemase [Alicycliphilus denitrificans BC]
MNQPPCTHTVGILAGMGPAAGVDFARLFVAACEDWLRSHGHAVCDQAYPAHWMAQLPIPDRTRALADGAA
PQPLEAMAQGLAQLAGLGARAVAMPCNTAHAWHAALQERVPQVELLHMPRETAAALRAQGQERVALLATE
GSYRIGLYEQAFAAQGIACVLPDAKARQWLMQGIYDGVKAGDMALAQQRFVAVGQALRAQHGGIALAMAC
TEIPLALPQAPEAQDWALIDPTAILARALARRAYGA
>gi|319765056|ref|YP_004128993.1| peptidase m55 d-aminopeptidase [Alicycliphilus denitrificans BC]
MKILVSVDIEGVAGVYHPEQTRAGNPEYERARRLMAAEASAAIAGAFDAGASEVYVNDSHGGFRNMPPDL
LDARAQAIQGKPRYLSMVAGVELGVDGLVCIGYHARSKGRGILAHTINSFAFARVRFNGQELGELGIYGL
LAGQYGVPVIAASGDDAFIAEYRALLPATRFIEVKRATGFGSGTSLSPEAACAAIRAGVAEAVPQARATA
PLAMAGPIVVELQTQTPALADLFCQWPTLARTGGDALRFDAPDVESAVRMLNCLSAMSSVLR
>gi|319765057|ref|YP_004128994.1| peptidase s58 dmpa [Alicycliphilus denitrificans BC]
MMDQPPRIGLLDAGARDAITDVAGVTVGHATLADGGVQTGVTVIHPHARDPFLHKVPAAAAVINGFGKSV
GLVQLDELGQLETPVALTNTFSVPAIAQAQIARCCAANPEVGRAWSTVNPLVLECNDGYLNDIQRMAVTA
RHYDLACASAGVEVAQGAVGAGRGMSSFQLKGGIGTASRQALLCGVARYTVGALVLANYGVQANLVWGGQ
PLGRRLAARQPARSEPEKGSIIMVLATDAPLDARQLRRLALRAAAGLARTGSVYGHGSGDIALAFSTAYT
LPHLPTGLMPAVTLVHEALLDPLFQAGADSVEQAIVHALWHAQAVTGRDGHRRDALRPLLQAMDK
>gi|319765058|ref|YP_004128995.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MTTPVISSMPAAASGASQAVRTPWREFWRKFKKQHVAVAALVFVALLVLVAVLAPWIVPFDAENYFDYDR
LNEGPSALHWFGVDPLGRDIFSRILMGARISLAAGFLSVAIGCAIGTTLGLLAGYYEGWWDRIVMRISDV
LFAFPGILLALGVVAILGSSMTNVIVAVAVFSVPAFARLVRGNTLVLKHMTYIESAQSIGASDFTIIARH
ILPGTISSIVVYFTMRVGTSIITAASLSFLGMGAQPPTPEWGAMLNEARADMVNAPHVALFPSLAIFFTV
LAFNLLGDGLRDALDPKIDRQT
>gi|319765059|ref|YP_004128996.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC]
MLNYFLKRLLGLLPTLLIVAVLVFLFVHMLPGDPARLAAGQDADEATVQLVRQELGLDRPLPEQFVHFFS
RMVQGDFGVSMRTRRPVSAEIGERFMPTLLLTIASMAWSVVFGMGIGIVSAVYRNKWPDRLGMTLAVSGI
SFPAFALGMMLMQVFSVNLGWLPTVGADSWRHYILPSITLGAAVAAVMARFTRASFVEVVQEDFVRTARA
KGLNERVVVLKHCLRNALIPVVTMMGLQFGFLLGGSIVVEAVFNWPGLGRLLVDAVTMRDYPVIQTLVLL
FSLEFILINLVVDMAYGFINPTIRYK
>gi|319765060|ref|YP_004128997.1| extracellular solute-binding protein family 5 [Alicycliphilus denitrificans BC]
MKKTTVTFRRSLLALAALAVSTGALAAGNAVLAIGGQPETLDPYNTNTTLTTAVTKTFYEGLFQFDKDLK
VRNVLAESHDVSKDGLVYTFKLRQGVKFHDGTDFNAEAVKVNLDRVMDPANRLLRATQFNRIAKVEAVNP
QTVRITLKEPFGPFINSLAHASAAIISPAALKKWGNKDIAFHPVGTGPYEFVEWKQTEAIVGKKFAGYWK
KGYPRIDQITWKPVLENNTRAAMLQTGEADFAYPVPYEQAANLKKADKVEVVSTPSIIVRFLAMNVLQKP
YDNPKVRQAIAYAINKEALAKVAFGGYAFPAQGIVPQGIQYAVKMDPIPYNVQKARELLKEAGYPNGFES
TLWGAYSNTTTQKVLQFVQQQLQQVGIKLQVQALEVGQRTEWVDAWPDPKTAKVRLYYTGWSSSTGEADW
ALRPLFATESWAPKLNNMSFYSNEVVDGGIAKALVTTDSNERAALYKTVQEQLMKDLPRIPLVTEENLSA
HAKRLSGVHVMPDGNINSDEIAVK
>gi|319765061|ref|YP_004128998.1| oligopeptide/dipeptide abc transporter, atpase subunit [Alicycliphilus denitrificans BC]
MTTHSPHAAVPLQLPEQRVLAASALSVRFATSERTVDAVRDLSFHVDRGETLAIVGESGSGKSVTSLALM
RLVEHGGGRIIGGSALLRRRGGQVLDVARATQAQMRDVRGADVAMIFQEPMTSLNPVFTAGEQIAESIRV
HQGMDRAGARAEALRMLELVRIPEARNVLDRFPHQLSGGMRQRVMIAMALSCKPQLLIADEPTTALDVTI
QAQILQLIRQLQDEMHMGVIFITHDMGVVAEVADRVLVMYRGDKVEEGASEQLFAAPRHAYTRALLSAVP
KLGAMQGTDLPRPFDLLRVDGTTTVGESTSVDTRPADAQPILRVKNLITRFDLRSGLLNRVTRRVHAVEQ
VSFDLYPGETLALVGESGCGKSTTGRSLLRLVESQSGAIEFGGRNILELPRGEVQALRRDIQFIFQDPFA
SLDPRLTVGFSIMEPLLVHKIGTREEAQARVDWLLEKVGLPREHAQRYPHEFSGGQRQRIAIARALALNP
KVVVADESVSALDVSIQAQIVNLMLDLQRELGVAFLFISHDMAVVERISHRVAVMYLGRIVEIGPRRAIF
ENPQHPYTRKLMAAVPIADPARRHLKRALLEGEIPSPIRPVGDEPVVPPLQEVGPGHFVAPQTA
>gi|319765062|ref|YP_004128999.1| peptidase t2 asparaginase 2 [Alicycliphilus denitrificans BC]
MKTMSHAARAAVPVIAIHGGAGTLMRSHISPAQESAYHAALQDVLRASQAVLAGGGTALDAVCVAVQALE
DCPLFNAGHGAVFTADATHELDAAVMDGATLAAGAVAGVARVRNPVLAAREVLRDGRHVLMIGAGAERLA
QAAGLAMVQPGYFSTEARLAQLRAAQGGGAGAVLDHDGAAALAARAQEGPLDEGRKMGTVGAVALDAQGH
LAAATSTGGMTNKRPGRVGDSPLIGAGTYADDRTAAVSCTGHGESFIRVAAAHDVCARMAYGGQALQEAS
DAVVHQALAAIGGTGGLIAVDRLGNVCLPFNTEGMYRGLARVGQAPESFIYR
>gi|319765063|ref|YP_004129000.1| sugar isomerase (sis) [Alicycliphilus denitrificans BC]
MSKPLGAPLEQVSIAVRISRTRLQLTPSHQQIADYVLKRPLQAATMPIDELAAAVGVSVATANRFARAIG
LDGYPMLRAELVKGFEAMLAPVEKMRVRLEKPGSAHDAFVAVLDESQNNIAATRAALDPAACAAAVQAVA
TARRIYVLGYGASGWLAGLLARGLDMHCENVHLLSSVAGTTDGARQLPRMGAQDLFIVISFPRYLRDSVA
LTRAAHERGVPVLALTDGAHSPLAPFARHCLFAKAESYHAVNSETTVLALIEALISAVALHTRDTVQNAT
RMTEAVLPWLHGAGRAGASNPAPTSAESSE
>gi|319765064|ref|YP_004129001.1| extracellular solute-binding protein family 5 [Alicycliphilus denitrificans BC]
MIQRTTFKRGMVAAAMVLAVGATHAASLRWAGANDILTIDPHAQNHQTTHAFLQQIYESLVRYDAKYQIE
PALATKWTQISPTQVRFELRKGVKFHDGAPFTADDVVFSLTRAGTAPSNMMSAVQSVKEVKKVDDYTVDL
ILKGPNPILLREITEARIMNKAWAEKHNSLKSQDYAGKEESYASRNANGTGPFSLVSWQPDQKLTLKKNP
NWWDKPKGNIDEVVFTPIKSAATRTAALVSGQVDFVVDPPPQDLARMKADSNLKLIEGAENRTIYLGLDQ
FRDELPGAGTPGKNPLKDKRVRQALYQAIDSAGLHSRTMRNLSVPAGVMVAPMVHGWSKQLDERAAKYDV
EAAKKLLADAGYPQGFALKLDCPNDRYVNDEAICQAVTAMWTRIGVKTQLQTAPMAQFVTRVMNNDVSAY
LFGWGVATFDALYTLDSLMSTKDGKTAAGVYNGGRFSDAKLDGMIQQIKVEMDTAKRDALLHDALKLTKD
EYYYLPLHHQIRPWAMRKNVETVHRADDRPMPTWTTIK
>gi|319765065|ref|YP_004129002.1| membrane protein insertase, yidc/oxa1 family domain containing [Alicycliphilus denitrificans BC]
MNDIRRTILWVIFGFSMVLLWDKWQIHNGNKATFFPTPPAQTASAPAVAASAAGAASVPVASSAAPGAAA
QPPAGSPVQPAATPRERVTVSTDVLRLAFDTDGGSLVQGELLKYPEMGDKAKPFLLLDESADRVYVAQTG
LIGGAFPTHKTPMALVPGPRELKDGENELQVRFESPDLGGVKLVKTWMLKRGAYDIAVRHEVVNTGTAPV
SPQLYLQLVRDGNKPAGESSFYSTFTGPAVYTEAKKYHKVEFKDIESGKAEIDKSSTNGYVAMVQHYFAT
AWLLADGVQRDNFVRKVDANLYSVGMIAQLGEIAPGQSKSMDARLFAGPQIETLLEKLAPGLELVKDYGW
LTILAKPLYWLLDQLHKVIANWGWSIVALVVLLKIAFYWLNAKAYASMAKMKAINPRIQEMRERLKDKPQ
QMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEMRGAPWIGWIHDLSSPDPFFILPLLMT
ASSLLQTALNPAPPDPMQAKMMWLMPLMFSVMFFFFPAGLVLYWLTNNILSIAQQWIINKRMGVPPQFNL
PKFR
>gi|319765066|ref|YP_004129003.1| hypothetical protein Alide_4420 [Alicycliphilus denitrificans BC]
MMRALLMALVRGYRLLLSPWIGSACRFEPTCSLYSLQALEKHGAAAGSYLTVRRLARCHPWCEGGHDPVP
QQLPRGMRLFSRLTPSDTPSSSPTKHS
>gi|319765067|ref|YP_004129004.1| hypothetical protein Alide_4421 [Alicycliphilus denitrificans BC]
MHRLKTRAQFQAVMAGGTVSRTAHFALHRLGLTAAGAASAGPDQESQALFAVPQGQPGVWLGAMVPKRWA
RRAVTRNAIKRQIHAVAAGFESRMPRAAHVVRLRAAFDRKHFVSATSDALKAAVRAELQQLFAAAERRGA
AAGAVP
>gi|319765068|ref|YP_004129005.1| ribosomal protein l34 [Alicycliphilus denitrificans BC]
MKRTYQPSKTRRARTHGFLVRMKTRGGRAVINARRAKGRKRLAV