LOCUS NC_014835 7164 bp DNA circular VRL 18-JUL-2011 DEFINITION Human papillomavirus type 148, complete genome. ACCESSION NC_014835 VERSION NC_014835.1 GI:317046144 KEYWORDS . SOURCE Human papillomavirus type 148 ORGANISM Human papillomavirus type 148 Viruses; dsDNA viruses, no RNA stage; Papillomaviridae; unclassified Papillomaviridae. REFERENCE 1 (bases 1 to 7164) AUTHORS Koehler,A., Schulz,E., Gottschling,M., Bravo,I.G., Stockfleth,E. and Nindl,I. TITLE Isolation and characterisation of nine novel human papillomavirus types associated with cutaneous warts JOURNAL Unpublished REFERENCE 2 (bases 1 to 7164) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (06-JAN-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 7164) AUTHORS Koehler,A., Schulz,E., Gottschling,M., Bravo,I.G., Stockfleth,E. and Nindl,I. TITLE Direct Submission JOURNAL Submitted (22-OCT-2009) Clinic for Dermatology, Venerology und Allergology, Haut Tumor Centrum Charite (HTCC), Charite - Universitaetsmedizin Berlin, Chariteplatz 1, Berlin 10117, Germany COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to GU129016. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..7164 /mol_type="genomic DNA" /country="Germany" /collected_by="Anja Koehler" /identified_by="Anja Koehler" /collection_date="Jan-2006" /host="Homo sapiens" /db_xref="taxon:942038" /isolate="34-60" /organism="Human papillomavirus type 148" gene 490..906 /locus_tag="HPV-148_gp1" /db_xref="GeneID:10067318" /gene="E6" CDS 490..906 /locus_tag="HPV-148_gp1" /protein_id="YP_004111309.1" /gene="E6" /db_xref="GI:317046148" /db_xref="GeneID:10067318" /codon_start=1 /product="E6" /translation="METPTGSLDVYCKEHGISFFELRISCIFCRFVCSLVDLAAFYNK RLSLVWKDKVCYACCSACLTLSAKYELENYYQCSLSSDYFEDIVRQPLQEVVIRCLKC LTALDYMEKLDHKRNCKPFHLIRGRWRGDCRNCAQK" gene 906..1187 /locus_tag="HPV-148_gp2" /db_xref="GeneID:10067312" /gene="E7" CDS 906..1187 /locus_tag="HPV-148_gp2" /protein_id="YP_004111310.1" /gene="E7" /db_xref="GI:317046149" /db_xref="GeneID:10067312" /codon_start=1 /product="E7" /translation="MQGDIVTLPDIELESLVIPANLICNETLSPDVEPEEEQTYKVDS QCHTCGARLRVCVVASYTAIRRLQLLLLEDLHLLCPHCARALCENGRAT" gene 1171..2979 /locus_tag="HPV-148_gp3" /db_xref="GeneID:10067313" /gene="E1" CDS 1171..2979 /locus_tag="HPV-148_gp3" /protein_id="YP_004111311.1" /gene="E1" /db_xref="GI:317046145" /db_xref="GeneID:10067313" /codon_start=1 /product="E1" /translation="MGEPHKGTSNIDCLEDINEWCFITEADCVDSAETLSELFDADTD ASNISNLIDDDDLDSLSQGNSLALFNNQVAEECDRAITNLKRKFIASPEHIVEKSSPR LQAVHISPQRKSISKRKLFEDSGIEHDETTDSVVQVEPLENSNNGATQEENAILQSSN VKATLYSKFKERFNVSFTEISRNFKSDKTCNHNWLIVAFAVQDDLIEASKTLMQQHCD YLQMIISGFTVLYLVEFKSTKNRETVLKLITQMLNVNERQVLCEPPRIRSTATAMFFY RKALANIGFKCGAYPQWMVKLTMVDHQFAAAETFKLSEMVQWAYDNDYTEESQIAFYY AQYADINSNAAAFLESNQQVKYVRDCCSMVRLYKRQELRNMSMGAWIRKCCSTVPEGD GWKEIAKFLKFQHVNMLSLLIALKQFFKNIPKKSCIVIYGPPDSGKSYFCFSLIRLLQ GKVVSFMNRNSHFWTQPLIDAKVGMLDDATFPCWTFLDTYMRNAFDGNSVSIDVKHKN LQQIKLPPMIITTNIAVPKEPTLKYLQSRLTCFEFPNTMPFNDVGKPLFNITTECWAM FFSKFFRQLELEEDDGDSADTDRTFCCTARNANDSN" gene 2912..4102 /locus_tag="HPV-148_gp4" /db_xref="GeneID:10067314" /gene="E2" CDS 2912..4102 /locus_tag="HPV-148_gp4" /protein_id="YP_004111312.1" /gene="E2" /db_xref="GI:317046146" /db_xref="GeneID:10067314" /codon_start=1 /product="E2" /translation="METQQTLTERFAAQQEMQMTLIEQESTDLRDHIKYWDSVRLENL LAYYSRKEGYTHLGLQPLPALTVSEYKCKEAIKMKLLLESLKDSRYGYEPWTLSEVSA EIINTNPRNAFKKKAFTVTVFFDNDQSNSFPYICWDHIYYQDEKSEWQKVAGQVDING LYFREVTGDITYFTLFQPDAERYGQTGQWSVTYKNHTLSTSVTSSSRTASDLENRPPT HPISSPKTPRKRRRQTGEDTTRESPTSTSSGLRFRRRRTEQGEPTTDGYNTRSTPRRR RAAVGSAVSPEEVGSGTRSVPRTGLTRNQRLQAEARDPTLILLQGCANSLKCFRYRCS HKHSHLYLAASTVFAWMYNSNEKSAEGRMLIAFSSNTQRDVFLKSVTIPKGCHYCFGN LDCL" gene <3486..3860 /locus_tag="HPV-148_gp5" /db_xref="GeneID:10067315" /gene="E4" CDS <3486..3860 /locus_tag="HPV-148_gp5" /protein_id="YP_004111313.1" /gene="E4" /note="start site not determined" /db_xref="GI:317046147" /db_xref="GeneID:10067315" /codon_start=1 /product="E4" /translation="HIKITLCLPLLPVPLGLPPTLKTDPPRTPFPLRKRLENADGRPA KTPHGNRPPPRVLDFDFDDDGPNKENLPPTDTTPDQHQEEEELLSGLRSLLRKWGQEL DLYQERVLHEINDYRRRLGIQH" gene 4104..5615 /locus_tag="HPV-148_gp6" /db_xref="GeneID:10067316" /gene="L2" CDS 4104..5615 /locus_tag="HPV-148_gp6" /protein_id="YP_004111314.1" /gene="L2" /db_xref="GI:317046151" /db_xref="GeneID:10067316" /codon_start=1 /product="L2" /translation="METKSRRKRAAPDQLYRHCLQGGDCIPDVQNKYEQNTWADVLLK VFGSLLYFGNLGIGTGRGSGGSLGYKPLGTTRIGQAAPITPARPSILIDAVGPPDIIP VDAGAPAVVPLSEGTIDTGLVAPDAGPGVGVDELELYTISDPTSDVGGVQPTPTVVST EEGAVAVIDAQPVPERPVQVYFDPNPTATSTLHIFPAPSITSTDVNIFVDSFSSQVIG GFDEIPLQRLDYSEFDIEDIPSTSTPSQKLEKVVSRAKSYYNKYIKQVPVTSQQFLKQ PSSLVQFEFENPAFDPDVTIEFERDLAEVQASPDADFADITKLHRPQLNVVEGVVRVS RLGETGTISTRSGTVIGQRVHFYHDISSIAVAEDIEMQVFGEFPGLNTVVDDILATTV VDLNNATDLGEDALLDTYGEDFTNTHLVINITDETTDTLSFPTISTEYSVNVLTPQLT NDIIVSYPNDNAVINSFTPSLTPVAPSYIPDYYADFYLYPSFLPKKRRRIDIV" gene 5626..7164 /locus_tag="HPV-148_gp7" /db_xref="GeneID:10067317" /gene="L1" CDS 5626..7164 /locus_tag="HPV-148_gp7" /protein_id="YP_004111315.1" /gene="L1" /db_xref="GI:317046150" /db_xref="GeneID:10067317" /codon_start=1 /product="L1" /translation="MSSLWLPSAGPLYLPPAKPVARVLRTDDYVTGTDVYFHAGSDRL LIVGHPYFDVKESAKNQITVPKVSANQYRVFRCKLPDPNKFALVDNTLFNSDRERLVW QVTGLEIKRGGPLGIGSTGNPYFNKISDTENPAVYPEKTGKEQRMDVSFDPKQTQLFI VGCAPAIGEYWDEAKPCNALKQGECPPIQLVNETIQDGDMGDIGFGAANFKKLQKDRA GVSLDLVDTFSIWPDFLKMTNDIYGDSIFFYGKREQCFARHLWARAGTAGDALPSPDN INMVFPPDIPPEVPQSNLGSFTYFTTVSGSLNTSDSQLFNRPYWLRRAQGTNNGICWG NDLFITVFDNTRGTNFTISVLGEKQDSELNSTYKYSATDFKQFLRHAEEYEFEIIFRL CKVTLDPDVLAHINVMNPRVLEDWNLAFVPPPPQGIEDAYRYLRSAATKCHKTPPEEE NQDPYANMVFWNVDMTERFSSDLSQHPLGRKFLYQVGLLNGKRPRTDYTVNTKRSVKR KRTK" ORIGIN 1 ttgtgttatg tttacatgct tattctctga gccataactg taactgtgaa tgcaataata 61 aatataatta ctgtgaaata tttgtgttgt tcttgagtca tgggggcaac attctttgca 121 cacccgtctg actatataag cttctatata gagacataaa gtatcagcta gatacatcga 181 ccatctatca atatcttcgt gagtaccgtt tctggtaatt tatattttta aaaggcgcca 241 aagggcatat aattaccgct ttcggtatgt cttgttatgg tgtctgccaa aaagagcaag 301 taaaggcgaa acacgacgat aaaatcacac ttacatacca gaatcgctac tggctgtaag 361 cctttgtacc gcctccggtt accaatgttt cctcctgctc attgttgtga acaatcacag 421 caaccaacaa tttggttacc gggagtggta tatatagttg taaattggct gtgcagacac 481 attttgctga tggagacccc aacaggatct ttagatgtgt attgcaaaga gcatgggatt 541 tctttttttg aattacgaat tagttgtatc ttttgcagat tcgtgtgctc tcttgtggat 601 cttgctgctt tttataataa gcgtttgtct cttgtttgga aagataaagt atgttatgct 661 tgttgctctg cttgtttaac gctttcagct aagtatgaac tagaaaacta ttatcagtgc 721 tcactatcaa gtgattactt tgaagatatt gtgcgtcaac cattacaaga ggttgtgatt 781 cgttgtttaa aatgccttac tgcgctagat tatatggaaa agttagatca taagagaaat 841 tgcaaaccat ttcatttaat tcgaggtcgt tggagaggag attgcagaaa ttgtgctcag 901 aaataatgca aggtgacatt gttactttac ctgatataga attagaatca ttagtaatac 961 cagcaaattt gatttgtaat gaaacattgt caccagatgt ggaaccggag gaggagcaaa 1021 cttataaagt tgattctcag tgtcacactt gtggagcaag attaagagtt tgtgtagtag 1081 cttcatacac tgcaattaga agattgcaac tgcttttgtt agaagatttg cacttgcttt 1141 gtccacattg cgcgagagcc ctctgtgaaa atgggagagc cacataaagg tacttcaaat 1201 attgactgtt tggaggatat taatgaatgg tgctttataa cagaggcgga ttgtgtggat 1261 agtgctgaga ctttatctga attgtttgat gcagatactg atgcttctaa tatttccaat 1321 ttaattgatg atgatgactt ggactcttta agtcagggaa attccctggc actattcaac 1381 aatcaagtag cagaggaatg tgatagagct ataacaaacc taaaacgaaa gtttatagca 1441 agcccggagc atattgttga gaaatcgagt ccgcggctgc aagcagttca catttctcct 1501 caaagaaaat cgatatcgaa aagaaaattg tttgaggaca gtggaataga acacgatgaa 1561 actacagatt ctgttgtaca ggtagaacct ttagaaaatt caaataatgg cgccacgcag 1621 gaggaaaatg caattttgca aagctccaac gtgaaagcaa ctttgtattc taaatttaaa 1681 gaaagattta atgtttcctt taccgaaata agtagaaact ttaaaagtga caaaacctgc 1741 aaccataact ggctaatagt tgcttttgca gtacaggatg acttaattga agcgtctaaa 1801 acattaatgc aacagcattg tgactatttg caaatgatta tatcaggatt tactgtattg 1861 tatttggtag aatttaaaag tacaaaaaat agggaaacag ttttaaaact tataacacaa 1921 atgttaaatg ttaatgagag acaagtgttg tgtgaaccac cacgaattcg aagtactgca 1981 actgcaatgt ttttctatag aaaggcgtta gcaaatatag gctttaagtg tggagcatac 2041 ccacagtgga tggtaaagct tactatggtt gaccatcagt ttgctgcagc agaaacattt 2101 aaattatcgg aaatggtaca atgggcttat gataatgatt atactgaaga atcacaaata 2161 gcattttatt atgcacagta tgcagacata aacagtaatg ctgcagcatt tttagaaagt 2221 aatcaacaag taaagtatgt aagagattgt tgttcaatgg tcaggttgta taaaagacaa 2281 gaacttagaa atatgtctat gggagcgtgg atacgaaaat gctgtagcac tgtgccagaa 2341 ggcgatggat ggaaagagat tgctaaattt ttaaagtttc aacatgttaa tatgttatca 2401 ttactaatag ctttaaagca attttttaaa aatattccta aaaagagctg tattgtgatc 2461 tatggacctc cagactctgg taaatcatat ttttgtttta gtttaataag attgttacag 2521 ggtaaagtag tatcgttcat gaatagaaat agtcactttt ggacccaacc tcttatagat 2581 gcaaaagttg gtatgttaga tgatgctaca tttccctgtt ggacatttct agacacatat 2641 atgaggaacg catttgatgg caatagtgtt tctatagatg taaaacataa aaacttgcag 2701 caaataaaat tacctcctat gattataact acaaacattg ctgtgcctaa agaacctaca 2761 ctaaaatatt tacaaagtag attaacgtgc tttgagtttc caaatacaat gccatttaat 2821 gatgtaggta agccattgtt caatataact actgaatgtt gggcaatgtt ttttagtaag 2881 tttttcagac aattagaact agaagaagac gatggagact cagcagacac tgaccgaacg 2941 ttttgctgca cagcaagaaa tgcaaatgac tctaattgaa caggagtcaa cagatttgcg 3001 agatcacata aaatattggg actctgttag attagaaaat ttattagctt actattcaag 3061 aaaagaaggc tatacacatt tgggcttaca accattacct gctttaacag tttctgaata 3121 taaatgtaaa gaagcaatca aaatgaaatt gctattagag agtttaaaag actcgcgata 3181 tggatatgaa ccatggacat tatctgaagt tagtgctgaa attattaaca caaatcctag 3241 gaacgctttt aaaaagaaag catttactgt aacagtgttt tttgataatg atcaaagcaa 3301 ctcatttcct tatatatgct gggatcatat atattatcaa gatgaaaagt ctgaatggca 3361 aaaagttgct ggacaagttg atattaatgg cctgtatttt agagaagtta ctggagacat 3421 tacatatttt acacttttcc aaccagatgc tgagagatat ggccaaacag gacaatggag 3481 tgtaacatat aaaaatcaca ctttgtctac ctctgttacc agttcctctc ggactgcctc 3541 cgaccttgaa aaccgacccc ccacgcaccc catttcctct ccgaaaacgc ctagaaaacg 3601 cagacggcag accggcgaag acaccacacg ggaatcgccc acctccacga gttctggact 3661 tcgatttcga cgacgacgga ccgaacaagg agaacctacc accgacggat acaacaccag 3721 atcaacacca agaagaagaa gagctgctgt cgggtctgcg gtctctcctg aggaagtggg 3781 gtcaggaact agatctgtac caagaacggg tcttacacga aatcaacgat tacaggcgga 3841 ggctcgggat ccaacattaa ttctgttaca aggttgtgca aatagtttaa agtgttttag 3901 atatcgctgt tcacacaaac attcacattt atatctagct gctagtacag tatttgcatg 3961 gatgtataat tcaaatgaaa agtctgctga aggaagaatg ttaatagcct ttagcagtaa 4021 tactcaaaga gatgtgtttt taaaatctgt aaccattcca aaaggttgcc actattgctt 4081 tgggaactta gattgcttgt aatatggaaa ctaaatctag acgcaagcgt gctgcaccag 4141 atcaattata taggcattgt ttgcaaggtg gtgattgtat tccagatgta caaaataaat 4201 atgagcaaaa cacttgggct gatgttctat taaaagtgtt tggaagtttg ctatactttg 4261 ggaatttagg cattggtact ggaaggggta gtgggggctc tttgggctat aaacctttag 4321 gaaccacccg cattggacaa gcagctccta taactcctgc aagacctagc atattaatag 4381 atgctgtagg ccctcctgat ataattcctg tagatgctgg agcaccagca gttgttcctt 4441 tatcagaagg aactatagat accgggttag ttgcacctga tgcaggtcct ggggtaggag 4501 tagatgagct ggaattatac actattagtg acccaacctc tgatgtgggt ggtgttcagc 4561 ctacacctac tgttgtgtca acagaggagg gggctgttgc tgtcattgat gcacagcccg 4621 ttcctgaacg ccctgtccag gtatattttg atcctaatcc tactgcaact tctacgttac 4681 atattttccc agcaccaagc attacatcta cagatgttaa tatatttgtt gattcctttt 4741 cttctcaggt tataggaggt tttgatgaaa ttcctttaca aagattagat tacagtgaat 4801 ttgatattga ggatattccc tctacaagta ctccttcaca aaaattagag aaagttgtat 4861 ccagagcaaa atcatattat aacaaataca ttaagcaggt gccagttaca tcacaacagt 4921 ttttgaagca gccaagcagt ttagtgcaat ttgaatttga aaatcccgcc tttgatcctg 4981 acgtcacaat agagtttgag cgggatttgg cagaggtcca ggcttcgccg gatgctgatt 5041 ttgcagatat tactaaacta cacagacctc aattaaatgt agttgaagga gttgtacgcg 5101 tcagcagatt aggtgaaact ggaacaataa gtaccagaag tggtactgtt ataggccaaa 5161 gagttcattt ttatcatgat atcagttcta tagctgtggc tgaagacatt gaaatgcaag 5221 tttttggtga atttccaggt ttaaatactg tggttgacga tattctagca actacagtgg 5281 tagatcttaa caatgcaaca gatttgggtg aagacgcact tttagatact tatggagagg 5341 attttactaa tacacattta gttatcaata taacagatga aacaactgat acactttcct 5401 ttcctactat ttcaacagaa tattcagtga acgtgctaac cccgcagtta actaatgata 5461 taatagtatc atatccaaat gataatgcag ttattaacag ttttacacct tcattaacac 5521 cagtggctcc tagttatata cctgactatt atgctgactt ttatttatat ccaagcttct 5581 tacctaaaaa gcgaagacga atagatattg tttgatttct tgcagatgtc ttctttgtgg 5641 ttaccaagcg ctggcccttt atacctacct cctgcaaagc ctgtggctcg tgtattgaga 5701 acggatgatt atgtgacggg cacagatgta tactttcatg ctggaagtga tcgcttattg 5761 attgtggggc atccttactt tgatgtaaaa gaaagtgcaa aaaatcagat tactgtgcct 5821 aaagtatccg caaaccagta tagagttttt agatgcaaat taccagatcc taataaattt 5881 gctttagttg ataatacact ttttaactca gatagagaac ggttggtgtg gcaagtaaca 5941 ggattagaaa taaaacgcgg tggtccctta ggtattggta gcacaggtaa tccttacttt 6001 aataaaatca gtgacactga aaatcctgcg gtatatccag aaaaaacagg gaaggaacaa 6061 cgtatggatg tttcctttga tccaaaacag acacagctat ttattgtagg gtgtgctcca 6121 gctattggtg aatattggga tgaagctaaa ccttgtaatg cactaaagca aggtgaatgt 6181 ccccctattc aattagtaaa tgaaacaata caagatggtg acatgggtga tataggtttt 6241 ggtgcagcaa attttaagaa gctgcaaaaa gacagagctg gtgtaagctt agatttagtg 6301 gatacattca gtatatggcc tgatttctta aaaatgacaa atgatatata cggagacagt 6361 atattttttt atggcaagcg ggaacaatgt tttgctaggc atttatgggc acgagctggc 6421 accgctggtg atgcattacc atctccagac aatatcaata tggtctttcc accggacatt 6481 ccaccagaag taccacaaag taatttaggt tctttcacct attttacaac tgttagtggt 6541 tcattaaata caagtgattc acaactattt aacagaccat attggcttcg cagagctcag 6601 ggcactaata atggtatatg ttggggaaat gatttgttta ttactgtatt tgataatacc 6661 agaggaacaa acttcacaat atcagtatta ggtgaaaagc aggacagcga attaaatagt 6721 acctataaat atagtgcaac agattttaaa cagtttttgc gtcatgcaga agaatatgaa 6781 tttgaaatca tttttagact ttgtaaagta actttagatc cagatgtgtt agcccatatt 6841 aatgttatga atcccagagt attagaagac tggaatctag cttttgttcc accacctcct 6901 cagggtatcg aagatgccta tcgttattta cggtctgcag ctacaaaatg tcataaaaca 6961 ccccctgagg aagaaaatca ggacccttat gcaaatatgg tgttttggaa tgttgatatg 7021 acagaacgct tctcatctga tttaagccag caccctttag gtagaaagtt tttatatcag 7081 gtgggattat tgaatggaaa acgtcccaga acagattata ctgtaaacac caaaagatct 7141 gtgaaacgaa aacgtaccaa ataa //