LOCUS NC_014378 2469596 bp DNA circular BCT 05-JUL-2011 DEFINITION Acetohalobium arabaticum DSM 5501 chromosome, complete genome. ACCESSION NC_014378 VERSION NC_014378.1 GI:302390797 DBLINK Project: 51423 KEYWORDS . SOURCE Acetohalobium arabaticum DSM 5501 ORGANISM Acetohalobium arabaticum DSM 5501 Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium. REFERENCE 1 (bases 1 to 2469596) AUTHORS Sikorski,J., Lapidus,A., Chertkov,O., Lucas,S., Copeland,A., Glavina Del Rio,T., Nolan,M., Tice,H., Cheng,J.F., Han,C., Brambilla,E., Pitluck,S., Liolios,K., Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A., Bruce,D., Detter,C., Tapia,R., Goodwin,L., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Rohde,M., Goker,M., Spring,S., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C. and Klenk,H.P. TITLE Complete genome sequence of Acetohalobium arabaticum type strain (Z-7288) JOURNAL Stand Genomic Sci 3 (1), 57-65 (2010) PUBMED 21304692 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2469596) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (06-AUG-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2469596) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Tapia,R., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Tindall,B., Pomrenke,H.G., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (19-JUL-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: Halophile Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.0.00.20 Genome Coverage :: 37x 454-TitaniumPE Sequencing Technology :: 454-FLX, 454-Titanium, Illumina ##Genome-Assembly-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..2469596 /organism="Acetohalobium arabaticum DSM 5501" /mol_type="genomic DNA" /strain="DSM 5501" /isolation_source="lagoon water from East Crimea, Arabat spit" /db_xref="taxon:574087" /country="Russia" gene 351..1700 /locus_tag="Acear_0001" /db_xref="GeneID:9514369" CDS 351..1700 /locus_tag="Acear_0001" /note="COGs: COG0593 ATPase involved in DNA replication initiation; InterProIPR018312:IPR013317:IPR013159:IPR010921:IPR 003593:IPR020591:IPR001957; KEGG: hor:Hore_00010 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; SPTR: B8CZN4 Chromosomal replication initiator protein dnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA" /codon_start=1 /transl_table=11 /product="chromosomal replication initiator protein DnaA" /protein_id="YP_003826618.1" /db_xref="GI:302390798" /db_xref="GeneID:9514369" /translation="MKKEDLTEIWQEALEIFKSELSKPSFKTWLKSTKLISVENDHAV IEVPNEFSKDWLETRYSNLIKETISQLIDRKINIKFTIPTNKEEKLVNKKKKDKKTDN QEEDDNNPASLNPKYTFDTFVIGSSNRFAHAASLAVAEAPAKAYNPLFIYGDVGLGKT HLMHAIGHYIIEHNSDLKVVYVTSEKFTNELINSIRDDNTVKFRNKYRNIDILLIDDI QFLAGKERTQEEFFHTFNALHEANKQIIISSDRPPKEIPTLEERLRSRFEWGLITDIQ EPDLETRIAILRKKATLEDLEVPNEVIVYIANQIHSNIRELEGALIRVVAYSSLTNKE ITVELAQEALKDIISTTEAEEINIKLIQQIVANHYNLEIEDMKSRKRTRAIAFPRQVA MYLSRELTDSSLPKIGEKFGGRDHTTVLHAYNKIDDKKEEDIQFKNTIKTLTNKINN" misc_feature 363..1658 /locus_tag="Acear_0001" /note="chromosomal replication initiation protein; Reviewed; Region: dnaA; PRK00149" /db_xref="CDD:178902" misc_feature 378..>596 /locus_tag="Acear_0001" /note="hypothetical protein; Validated; Region: PRK06672" /db_xref="CDD:180654" misc_feature 771..1163 /locus_tag="Acear_0001" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 807..830 /locus_tag="Acear_0001" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(810..833,996..998,1098..1100) /locus_tag="Acear_0001" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 984..1001 /locus_tag="Acear_0001" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature <1044..1388 /locus_tag="Acear_0001" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 1134..1136 /locus_tag="Acear_0001" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 1422..1658 /locus_tag="Acear_0001" /note="C-terminal domain of bacterial DnaA proteins. The DNA-binding C-terminal domain of DnaA contains a helix-turn-helix motif that specifically interacts with the DnaA box, a 9-mer motif that occurs repetitively in the replication origin oriC. Multiple...; Region: Bac_DnaA_C; cd06571" /db_xref="CDD:119330" misc_feature order(1491..1493,1515..1520,1539..1541,1557..1565, 1590..1604,1611..1613,1620..1625) /locus_tag="Acear_0001" /note="DnaA box-binding interface [nucleotide binding]; other site" /db_xref="CDD:119330" gene 1966..3063 /locus_tag="Acear_0002" /db_xref="GeneID:9511978" CDS 1966..3063 /locus_tag="Acear_0002" /EC_number="2.7.7.7" /note="COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: amt:Amet_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III beta chain; SPTR: A6TJ77 DNA polymerase III subunit beta; TIGRFAM: DNA polymerase III subunit beta; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III subunit beta" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit beta" /protein_id="YP_003826619.1" /db_xref="GI:302390799" /db_xref="GeneID:9511978" /translation="MQIKIDRKNFYDGIQTVRKAISSKSTLPILSGILIETQEKKLKL VGTDLELGIECRVDANIIKDGAIVLPANHLANIVRELPNKELELELKKDNKIEISCGL SQFKIHGSPADEYPLLPEVGSGIEYTLSQEKFQAMINRIKFATSDDESRPFLTGGLLS IDNENLKMVATDSYRLAYTQLELDKDLKNEKIIIPSKTLNELSKLLNSEDEIRFLITD NQILFEFSEITIISRLIEGQFPNYKQVIPDNHKTEIKLKKKELLNATKRSALVARNNS NIIKTKFQNDKLMIESNAPEVGQAYEELSTSQHGDDTEIAFNANYLIDVLKVIDNEEI LIELSGELSPGVIKEVDNDNYIHVIMPVRST" misc_feature 1966..3054 /locus_tag="Acear_0002" /note="DNA polymerase III subunit beta; Validated; Region: PRK05643" /db_xref="CDD:180180" misc_feature 1966..3054 /locus_tag="Acear_0002" /note="Beta clamp domain. The beta subunit (processivity factor) of DNA polymerase III holoenzyme, refered to as the beta clamp, forms a ring shaped dimer that encircles dsDNA (sliding clamp) in bacteria. The beta-clamp is structurally similar to the...; Region: beta_clamp; cd00140" /db_xref="CDD:29053" misc_feature order(2035..2037,2179..2181,2200..2202,2554..2556) /locus_tag="Acear_0002" /note="putative DNA binding surface [nucleotide binding]; other site" /db_xref="CDD:29053" misc_feature order(2182..2184,2191..2193,2269..2271,2275..2277, 2773..2775,2866..2871) /locus_tag="Acear_0002" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29053" misc_feature order(2476..2478,2482..2493,2917..2919,3043..3054) /locus_tag="Acear_0002" /note="beta-clamp/clamp loader binding surface; other site" /db_xref="CDD:29053" misc_feature order(2476..2478,2482..2487,2698..2700,2803..2805, 2842..2847,2926..2928,3043..3054) /locus_tag="Acear_0002" /note="beta-clamp/translesion DNA polymerase binding surface; other site" /db_xref="CDD:29053" gene 3075..3284 /locus_tag="Acear_0003" /db_xref="GeneID:9511979" CDS 3075..3284 /locus_tag="Acear_0003" /note="COGs: COG2501 conserved hypothetical protein; InterPro IPR013838:IPR002942; KEGG: dth:DICTH_1441 hypothetical protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: B5YFF2 Conserved domain protein; PFAM: S4 domain" /codon_start=1 /transl_table=11 /product="RNA-binding S4 domain protein" /protein_id="YP_003826620.1" /db_xref="GI:302390800" /db_xref="GeneID:9511979" /translation="MREIKIKTKDINLNQFLKWANIVSTGGEAKLLIKKGKVMVNGEV EKRRGFTLHPGDVIKIDNEEYKVIT" misc_feature 3081..3257 /locus_tag="Acear_0003" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cl09940" /db_xref="CDD:186878" gene 3311..4435 /locus_tag="Acear_0004" /db_xref="GeneID:9511980" CDS 3311..4435 /locus_tag="Acear_0004" /note="COGs: COG1195 recombinational DNA repair ATPase (RecF pathway); InterPro IPR018078:IPR003395:IPR001238; KEGG: hor:Hore_00040 DNA replication and repair protein RecF; PFAM: SMC domain protein; SPTR: B8CZN7 DNA replication and repair protein recF; TIGRFAM: DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein" /codon_start=1 /transl_table=11 /product="DNA replication and repair protein RecF" /protein_id="YP_003826621.1" /db_xref="GI:302390801" /db_xref="GeneID:9511980" /translation="MYLTNLFLKNFRNYHTLELKLNRNLNIFIGDNAEGKTNILEAIY LLSTGDSHRTNITSEMVNWQQDSFYISSLVNRKEQEFKIEFLFKNRKKEVKINDNKLQ KLEDLLGYINAIIFSPEDLELVKGSPSKRRKFINLEISQVNSYYYHNLQEYRRIVKQR NNLLKEIREGKSSKDMLVVWNQQLIELGSKIITKRLNALDKLSILARLMHRKITDGLE TLELSYQSSLDLNGNNSTTEEIETVFTKKLKANQQKEIDRGVSIFGPHRDDIIFEIND INTRKFGSQGQQRTAALALKLAELEFMKSEIGEYPILLLDDVFSELDNNRQQYLLKVI ENRIQTFITSTEINRLHKLEKNKNIYQVKGGKVMKTKYDG" misc_feature 3311..4411 /locus_tag="Acear_0004" /note="recombination protein F; Reviewed; Region: recF; PRK00064" /db_xref="CDD:178835" misc_feature 3317..>3859 /locus_tag="Acear_0004" /note="RecF is a recombinational DNA repair ATPase that maintains replication in the presence of DNA damage. When replication is prematurely disrupted by DNA damage, several recF pathway gene products play critical roles processing the arrested replication...; Region: ABC_RecF; cd03242" /db_xref="CDD:73001" misc_feature 3398..3421 /locus_tag="Acear_0004" /note="Walker A/P-loop; other site" /db_xref="CDD:73001" misc_feature order(3407..3412,3416..3424,3611..3613) /locus_tag="Acear_0004" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73001" misc_feature 3602..3613 /locus_tag="Acear_0004" /note="Q-loop/lid; other site" /db_xref="CDD:73001" misc_feature <4100..4411 /locus_tag="Acear_0004" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 4157..4186 /locus_tag="Acear_0004" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 4244..4261 /locus_tag="Acear_0004" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 4268..4279 /locus_tag="Acear_0004" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 4334..4354 /locus_tag="Acear_0004" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene 4428..5309 /locus_tag="Acear_0005" /db_xref="GeneID:9511981" CDS 4428..5309 /locus_tag="Acear_0005" /note="InterPro IPR007922; KEGG: nth:Nther_0005 hypothetical protein; PFAM: protein of unknown function DUF721; SPTR: B2A2Z0 Putative uncharacterized protein; PFAM: protein of unknown function (DUF721)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826622.1" /db_xref="GI:302390802" /db_xref="GeneID:9511981" /translation="MVNPINKVLEKTLQNLNLTHKIKEKKVLNIWSEVIGDKLKKHTK ASYINQGILFITVNNSTWAHQLLFLKEDLISRLNKKLDQKIVEDIRFKLGSINSTDLT EDKGSKDSFNLSKIELTTEEMTEIKTKLNSVPDEKLSRKLYSILAKDKKMNKWKEKEG WVRCDYCSTLHPKETENCMICQLKSEKNFNEIEEVLIENPWLTYEEISNFFPSLAHSD YNRIRKELIIDFWQDIKEKIPQAINNKNNDRSTQEIKILIQNYVMLKRSIRPDKLNRN IIKEVIGKNYIQVYNRL" misc_feature 4437..4700 /locus_tag="Acear_0005" /note="Protein of unknown function (DUF721); Region: DUF721; cl02324" /db_xref="CDD:186523" gene 5325..5582 /locus_tag="Acear_0006" /db_xref="GeneID:9511982" CDS 5325..5582 /locus_tag="Acear_0006" /note="KEGG: hor:Hore_00050 hypothetical protein; SPTR: B8CZN8 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826623.1" /db_xref="GI:302390803" /db_xref="GeneID:9511982" /translation="MLLHLGNDYMIPTKDVVMIADIESTDSEITREFLEVAKEEGFIK NFSKGEPKSFVLTNETIYYSNISSKTLRKRMNYVNRLSRDY" gene 5631..7550 /locus_tag="Acear_0007" /db_xref="GeneID:9511983" CDS 5631..7550 /locus_tag="Acear_0007" /EC_number="5.99.1.3" /note="COGs: COG0187 type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR018522:IPR003594:IPR013506:IPR006171:IPR 002288:IPR014721:IPR013759:IPR013760:IPR020568:IPR001241:I PR000565:IPR011557; KEGG: hor:Hore_00060 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: B8CZN9 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit B" /protein_id="YP_003826624.1" /db_xref="GI:302390804" /db_xref="GeneID:9511983" /translation="MDRNEFNHTKYDADQIQVLEGLEAVRKRPGMYVGGTGARGLHHL VYEVVDNSIDEALAGYCDNIEVIIEPGNVVTVIDDGRGIPISSHPNLNKPAVEIVMTV LHAGGKFDNEGYKVSGGLHGVGVSVVNALSEWLEVEVMRDNKIYHQRYEEGVPVKDLT VIGESQASGTMIKFKPDLEIFESIDFEYKKLIKRLKELAYLNKGIKIEIKDKRRDEIK TDIFQYDGGIVSFVQELNENKDPIHEEPIYFETEEEDNHIEVAIQYNETYVDNIFTFA NNINTHEGGNHLSGFKSALTRTINDYARRHDYLKEDDSNLSGDDIREGIVAIVNVKLP DPQFEGQTKTKLANSEVRGIVDSVVSENLDRFLEEDPEIGSIIVQKAIKAAEARKAAK KARELTRRKSALTSTALPGKLADCSSRDPEESELYIVEGDSAGGSAKQGRDRKFQAIL PLKGKILNVEKARLNKILNNNEIRSLITALGTGIGKEFDMEQARYKKIIIMTDADVDG AHIRTLLLTFFYRYMRPLLEAGNIYIAQPPLYKVNKGRKEYYVYNDRKLEELLNEIGR SGISIQRYKGLGEMNPKQLWETTMDPENRTTLQVQIEDAVMADDIFTTLMGDKVAPRR KFIQKHAKEVKEIDI" misc_feature 5655..7547 /locus_tag="Acear_0007" /note="DNA gyrase subunit B; Validated; Region: gyrB; PRK05644" /db_xref="CDD:180181" misc_feature 5742..6065 /locus_tag="Acear_0007" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cl00075" /db_xref="CDD:193644" misc_feature 6306..6764 /locus_tag="Acear_0007" /note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having a ribosomal S5 domain 2-like fold, of the type found in proteins of the type IIA family of DNA topoisomerases similar to the B subunits of E. coli DNA gyrase and E. coli Topoisomerase IV which are...; Region: TopoII_Trans_DNA_gyrase; cd00822" /db_xref="CDD:48467" misc_feature 6459..6461 /locus_tag="Acear_0007" /note="anchoring element; other site" /db_xref="CDD:48467" misc_feature order(6633..6635,6642..6647,6651..6653) /locus_tag="Acear_0007" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48467" misc_feature order(6651..6653,6657..6659) /locus_tag="Acear_0007" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:48467" misc_feature 6900..7241 /locus_tag="Acear_0007" /note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in proteins of the type IIA family of DNA topoisomerases similar to the Escherichia coli GyrB subunit. TopoIIA enzymes cut both strands of...; Region: TOPRIM_TopoIIA_GyrB; cd03366" /db_xref="CDD:173786" misc_feature order(6918..6923,6930..6932,7137..7139,7143..7145, 7149..7151) /locus_tag="Acear_0007" /note="active site" /db_xref="CDD:173786" misc_feature order(6918..6920,7137..7139) /locus_tag="Acear_0007" /note="putative metal-binding site [ion binding]; other site" /db_xref="CDD:173786" misc_feature 7323..7514 /locus_tag="Acear_0007" /note="DNA gyrase B subunit, carboxyl terminus; Region: DNA_gyraseB_C; pfam00986" /db_xref="CDD:189792" gene 7585..10020 /locus_tag="Acear_0008" /db_xref="GeneID:9511984" CDS 7585..10020 /locus_tag="Acear_0008" /EC_number="5.99.1.3" /note="COGs: COG0188 type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterProIPR002205:IPR006691:IPR013758:IPR013757:IPR 013760:IPR005743; KEGG: hor:Hore_00070 DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: B8CZP0 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit A" /protein_id="YP_003826625.1" /db_xref="GI:302390805" /db_xref="GeneID:9511984" /translation="MPELKKQEATSVNIENEMKESYMDYAMSVIAGRALPDVRDGLKP VHRRILYAMHQLGITPNKSHKKSARIVGEVLGKYHPHGDTAVYDTMVRMAQNFSYRYM LVDGHGNFGSVDGDSAAAMRYTEARMSKLSTELLSDINKDTVDFKPNFDDTLKEPEVL PSRLPNLLINGSSGIAVGMSTNIPPHNLTEVIDGLIAMIDNPDLDIIELMKIIKGPDF PTGGLIMGRKGIKKAFETGKGKVKVRAKTEIEEFGNNRERIIVNELPYQVNKAKLVEK TANLVRDGEVEGIADLRDESDRNGMRISIDLRKSANPKIVLNKLFKHTQLQRTFGIIM LALVDGEPEVLSLKEVLQHYLEHQKEVVTRRTKYNLDKAQSRVHILEGLKTAFNNIDA VVKTIRSSESKNVAQERLISDFDLTKKQAKAILRMRLQRLTGLEIEKIESEYQKLIEE IEYLKSILASEEKLLDIIKDEILVLKEKYKDERRTKIVDQEIDLAVEDLIEEEEILIT ITDNNYIKRIPLDTYRSQHRGGRGIIGINPDAKDSVEQLYTTSTHDYLLFFTNQGRTY RLKGYQIPDASRQAKGTAIINLLDMEPNERVTAVIPVEDFDLDDYLLMVTEQGIVKRT ELQEFNTNYTGLIALDLQQNDELIEVRLTTGQEDIILGTELGLAIRFNESEVRSMGRT ARGVKGIDLASQDKVVGADIIKDGGKLLVVTDKGYGKQTPLNKYRRQSRAGKGLLTIK RTDKNGKLTALKVVEEDDEVMLISKEGIVIRMSVSEISSTSRNTQGVNLMSLVEGDRV VSLAHIEDEDGNE" misc_feature 7618..10008 /locus_tag="Acear_0008" /note="DNA gyrase subunit A; Validated; Region: PRK05560" /db_xref="CDD:180128" misc_feature 7678..9000 /locus_tag="Acear_0008" /note="DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC), bacterial DNA gyrases (A subunit, GyrA),mammalian DNA toposiomerases II. DNA topoisomerases are essential enzymes that regulate the conformational changes in...; Region: TOP4c; cd00187" /db_xref="CDD:29149" misc_feature order(7678..7758,7771..7920,7924..7980,7984..8055, 8062..8064) /locus_tag="Acear_0008" /note="CAP-like domain; other site" /db_xref="CDD:29149" misc_feature 7951..7953 /locus_tag="Acear_0008" /note="Active site [active]" /db_xref="CDD:29149" misc_feature order(8746..8754,8761..8772,8803..8808,8848..8898) /locus_tag="Acear_0008" /note="primary dimer interface [polypeptide binding]; other site" /db_xref="CDD:29149" misc_feature 9118..9237 /locus_tag="Acear_0008" /note="DNA gyrase C-terminal domain, beta-propeller; Region: DNA_gyraseA_C; pfam03989" /db_xref="CDD:190822" misc_feature 9244..9396 /locus_tag="Acear_0008" /note="DNA gyrase C-terminal domain, beta-propeller; Region: DNA_gyraseA_C; pfam03989" /db_xref="CDD:190822" misc_feature 9412..9546 /locus_tag="Acear_0008" /note="DNA gyrase C-terminal domain, beta-propeller; Region: DNA_gyraseA_C; pfam03989" /db_xref="CDD:190822" misc_feature 9553..9696 /locus_tag="Acear_0008" /note="DNA gyrase C-terminal domain, beta-propeller; Region: DNA_gyraseA_C; pfam03989" /db_xref="CDD:190822" misc_feature 9706..9849 /locus_tag="Acear_0008" /note="DNA gyrase C-terminal domain, beta-propeller; Region: DNA_gyraseA_C; pfam03989" /db_xref="CDD:190822" misc_feature 9856..9999 /locus_tag="Acear_0008" /note="DNA gyrase C-terminal domain, beta-propeller; Region: DNA_gyraseA_C; pfam03989" /db_xref="CDD:190822" gene 10646..12170 /locus_tag="Acear_R0001" /db_xref="GeneID:9511985" rRNA 10646..12170 /locus_tag="Acear_R0001" /product="16S ribosomal RNA" /db_xref="GeneID:9511985" gene 12258..12334 /locus_tag="Acear_R0002" /db_xref="GeneID:9511986" tRNA 12258..12334 /locus_tag="Acear_R0002" /product="tRNA-Ile" /db_xref="GeneID:9511986" gene 12355..12430 /locus_tag="Acear_R0003" /db_xref="GeneID:9511987" tRNA 12355..12430 /locus_tag="Acear_R0003" /product="tRNA-Ala" /db_xref="GeneID:9511987" gene 12486..15436 /locus_tag="Acear_R0004" /db_xref="GeneID:9511988" rRNA 12486..15436 /locus_tag="Acear_R0004" /product="23S ribosomal RNA" /db_xref="GeneID:9511988" gene 15548..15664 /locus_tag="Acear_R0006" /db_xref="GeneID:9511989" rRNA 15548..15664 /locus_tag="Acear_R0006" /product="5S ribosomal RNA" /db_xref="GeneID:9511989" gene 15898..16425 /locus_tag="Acear_0009" /db_xref="GeneID:9511990" CDS 15898..16425 /locus_tag="Acear_0009" /note="COGs: COG1225 peroxiredoxin; InterProIPR017937:IPR000866:IPR012335:IPR012336:IPR 017936; KEGG: hor:Hore_18200 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: B8CZ50 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen" /protein_id="YP_003826626.1" /db_xref="GI:302390806" /db_xref="GeneID:9511990" /translation="MKKVQKELILTLFLVGILLLVGCTQTELREKASDVPIKPKVDFK APDFTLTDLNGKKVKLSDFKGQVVFLNFWATWCPPCRAEMPHIQEIHQEKGNKVKVLA VNVKESPKKVKEFMEKNGYNFTVLMDKTGEVANDYLVRGIPKTLIINQERVITTEHVG SMNKTKMNNLLTEAF" misc_feature 16036..16377 /locus_tag="Acear_0009" /note="TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing...; Region: TlpA_like_family; cd02966" /db_xref="CDD:48515" misc_feature order(16126..16128,16135..16137) /locus_tag="Acear_0009" /note="catalytic residues [active]" /db_xref="CDD:48515" gene 16502..17482 /locus_tag="Acear_0010" /db_xref="GeneID:9511991" CDS 16502..17482 /locus_tag="Acear_0010" /note="COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR002142:IPR004635; KEGG: tte:TTE0850 periplasmic serine protease (ClpP class); PFAM: peptidase S49; SPTR: C6PKC5 Signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type" /codon_start=1 /transl_table=11 /product="signal peptide peptidase SppA, 36K type" /protein_id="YP_003826627.1" /db_xref="GI:302390807" /db_xref="GeneID:9511991" /translation="MGFSIKKMTVSILLSFLIILVILGGLGFLLINFLGNSDQAGVES IAVINIHGPISVGGTQEVLSTSQTNASEVIKQINEAKDNKKIKALLLRVNSPGGSSAA SDEIYRELKKFKKTGKPVVISMGDIATSGGYYISAIADQIYANPSTITGSIGVIMQFK NLQDLYDKLGVDSITFKSGPYKDIGNPDRKLTAEEKELLQNMVDEVYQEFLTAVAEGR SMSKSKVEKLADGRIYNGRKAKKLGLVDEMGTFYDAVKTTAKLAEMKADPNLIYYNRS SPLERFFRSTTNLIKGVLLQQGLKINSNNPNELYYHLLQEEKVNNLELEY" misc_feature 16634..17278 /locus_tag="Acear_0010" /note="Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad; Region: S49_Sppa_N_C; cd07023" /db_xref="CDD:132934" misc_feature order(16652..16654,16775..16777,16889..16891,16934..16936, 16940..16942,16964..16975,17120..17122,17192..17200, 17204..17206,17213..17215) /locus_tag="Acear_0010" /note="tandem repeat interface [polypeptide binding]; other site" /db_xref="CDD:132934" misc_feature order(16712..16714,16733..16735,16811..16813,17009..17011, 17015..17029,17114..17116,17126..17128) /locus_tag="Acear_0010" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:132934" misc_feature 16889..16891 /locus_tag="Acear_0010" /note="active site residues [active]" /db_xref="CDD:132934" gene 17980..18225 /locus_tag="Acear_0011" /db_xref="GeneID:9511992" CDS 17980..18225 /locus_tag="Acear_0011" /note="InterPro IPR007167; KEGG: hor:Hore_02720 ferrous iron transport protein FeoA; PFAM: FeoA family protein; SPTR: B8D1F6 ferrous iron transport protein FeoA; PFAM: FeoA domain" /codon_start=1 /transl_table=11 /product="FeoA family protein" /protein_id="YP_003826628.1" /db_xref="GI:302390808" /db_xref="GeneID:9511992" /translation="MKLTNIPIGKSGKVMRLTCQGQKRRRLLDLGLIPGTIVRAKQKS PFGDPIAFEIRGATMALRSEETEAVIIEEVKKNKKVS" misc_feature 17980..18174 /locus_tag="Acear_0011" /note="FeoA domain; Region: FeoA; cl00838" /db_xref="CDD:193951" gene 18241..19044 /locus_tag="Acear_0012" /db_xref="GeneID:9511993" CDS 18241..19044 /locus_tag="Acear_0012" /note="COGs: COG0370 Fe2+ transport system protein B; InterPro IPR002917:IPR011619:IPR006073; KEGG: hor:Hore_02710 ferrous iron transport protein FeoB; PFAM: GTP-binding protein HSR1-related; ferrous iron transport protein B domain protein; SPTR: B8D1F5 ferrous iron transport protein FeoB; PFAM: ferrous iron transport protein B; TIGRFAM: small GTP-binding protein domain" /codon_start=1 /transl_table=11 /product="GTP-binding protein HSR1-related protein" /protein_id="YP_003826629.1" /db_xref="GI:302390809" /db_xref="GeneID:9511993" /translation="MEPKADSDQISLLRESFNINFKRGNPVIALAGNPNTGKSTVFNG LTGLKQDTGNWPGKTVTQAQGYYTYQNQDYILVDLPGTYSLLANSTDEQVARDFICFA QPDATIVVVDATKLERNLNLVLQIMELTNNVVVCLNLMDEARRKNIEIDVEGLSQDLQ IPIIPTVAPKKIGLEKLKDKIADIVTGRIKVTPKQIKYSSQIEEAIEKILPDLEAILP DYINSRWVALQLIEGDNSILEAMQTYYPEQIVKEITANLQSEVKAGGAF" misc_feature <18253..>18381 /locus_tag="Acear_0012" /note="tRNA modification GTPase TrmE; Reviewed; Region: trmE; PRK05291" /db_xref="CDD:179996" misc_feature 18319..18882 /locus_tag="Acear_0012" /note="Ferrous iron transport protein B; Region: FeoB_N; pfam02421" /db_xref="CDD:190305" misc_feature 18328..18801 /locus_tag="Acear_0012" /note="Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this...; Region: FeoB; cd01879" /db_xref="CDD:133280" misc_feature 18334..18357 /locus_tag="Acear_0012" /note="G1 box; other site" /db_xref="CDD:133280" misc_feature order(18343..18345,18349..18360,18652..18657,18661..18663, 18739..18747) /locus_tag="Acear_0012" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133280" misc_feature 18412..18426 /locus_tag="Acear_0012" /note="Switch I region; other site" /db_xref="CDD:133280" misc_feature 18415..18417 /locus_tag="Acear_0012" /note="G2 box; other site" /db_xref="CDD:133280" misc_feature 18472..18483 /locus_tag="Acear_0012" /note="G3 box; other site" /db_xref="CDD:133280" misc_feature order(18481..18537,18547..18552) /locus_tag="Acear_0012" /note="Switch II region; other site" /db_xref="CDD:133280" misc_feature 18652..18663 /locus_tag="Acear_0012" /note="G4 box; other site" /db_xref="CDD:133280" misc_feature 18739..18747 /locus_tag="Acear_0012" /note="G5 box; other site" /db_xref="CDD:133280" gene 19031..20428 /locus_tag="Acear_0013" /db_xref="GeneID:9511994" CDS 19031..20428 /locus_tag="Acear_0013" /note="COGs: COG0370 Fe2+ transport system protein B; InterPro IPR011619:IPR011642:IPR011640; KEGG: hor:Hore_02700 ferrous iron transport protein FeoB; PFAM: ferrous iron transport B domain protein; nucleoside recognition domain protein; ferrous iron transport protein B domain protein; SPTR: B8D1F4 ferrous iron transport protein FeoB; PFAM: ferrous iron transport protein B C terminus; Nucleoside recognition" /codon_start=1 /transl_table=11 /product="ferrous iron transport B domain protein" /protein_id="YP_003826630.1" /db_xref="GI:302390810" /db_xref="GeneID:9511994" /translation="MELSESNQLNSITEKVNRLFNKEEREELSDQMVKDIYTKAERIA NRNTKVKEGKTSNWEEKLDRILTSKWTGFPIMLLMLGGVFWITLVGASYPSSILNKAL FSVEGVLSDMVMSLGIPEWLHGLLIDGVYRTVAWVIAVMFPPMAIFFPLFTLLEDLGY LPRVAFNLDNFFKKAGAHGKQALTMSMGFGCNAAGVIATRIIDSPREKLIAILTNNFV PCNGRFPTLIILSSLFMTGIAGGMYNSFVAAGIVVGIVLVGIMMTFVVSWGLSKTILK GKPSSFTLELPPFRKPQLGKVLVRSFIDRTLFVLGRAIMVAAPAGIIVWVLANTTINR ASLITHLANWLDPFATLLGMDGFILLAFFLGLPANEIVLPVLLMSYLSTGTMLEPGSM ESFKNILVNNGWTWVTALSTMLFSLLHFPCGTTLLTIKKETDSLKWTIFAGVLTLGIA VIVTFIVNQMIHIFL" misc_feature 19442..19732 /locus_tag="Acear_0013" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" misc_feature 19811..19936 /locus_tag="Acear_0013" /note="Ferrous iron transport protein B C terminus; Region: FeoB_C; pfam07664" /db_xref="CDD:191804" misc_feature 19964..20329 /locus_tag="Acear_0013" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" gene complement(20400..20885) /locus_tag="Acear_0014" /db_xref="GeneID:9511995" CDS complement(20400..20885) /locus_tag="Acear_0014" /note="COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367:IPR011991; KEGG: hor:Hore_02690 iron dependent repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor; SPTR: B8D161 Iron dependent repressor; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain" /codon_start=1 /transl_table=11 /product="iron (metal) dependent repressor, DtxR family" /protein_id="YP_003826631.1" /db_xref="GI:302390811" /db_xref="GeneID:9511995" /translation="MLSPSLEDYLEEIYRFLDQQGYVRTTDIADKLDVSLPSVTKAVK KLSEKGYLDYERYKNIQLTKKGQEVGNFLVTRNKLLRDFLHVIGSNCDKYQEAEAMEH YLSQKTVDAITCLVAFFKQHPEYQQDFFDFQEKFMNTESSQDNSQDDFNLLIKRYESF D" misc_feature complement(20481..20885) /locus_tag="Acear_0014" /note="manganese transport transcriptional regulator; Provisional; Region: PRK03902" /db_xref="CDD:179669" misc_feature complement(20712..20879) /locus_tag="Acear_0014" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(20517..20699) /locus_tag="Acear_0014" /note="Iron dependent repressor, metal binding and dimerisation domain; Region: Fe_dep_repr_C; pfam02742" /db_xref="CDD:145737" gene complement(21163..21705) /locus_tag="Acear_0015" /db_xref="GeneID:9511996" CDS complement(21163..21705) /locus_tag="Acear_0015" /note="KEGG: conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826632.1" /db_xref="GI:302390812" /db_xref="GeneID:9511996" /translation="MIFKVLKKVFNRSNVISEIEIAEELIDLLSNENQELMEELKSTK KSKQEIALLLTSIYLFNYKLTIKTNNLSMRSKKIEDIFYHFSFLIAEKNINFYNLNQQ TNTLVDKAKAKADRLMKIYQSSSSNKKINRIQEVVKALYYDFSAENQEHGPQEMKLLL DLVIQNITLIQDYLIKVSKI" gene 22612..23058 /locus_tag="Acear_0016" /db_xref="GeneID:9511997" CDS 22612..23058 /locus_tag="Acear_0016" /note="COGs: COG1661 DNA-binding protein with PD1-like DNA-binding motif; KEGG: dau:Daud_0493 DNA-binding protein; SPTR: B1I1S9 DNA-binding protein with PD1-like DNA-binding motif; PFAM: Domain of unknown function (DUF296)" /codon_start=1 /transl_table=11 /product="DNA-binding protein" /protein_id="YP_003826633.1" /db_xref="GI:302390813" /db_xref="GeneID:9511997" /translation="MEYTEASIGRIFILRLETGDQIPETIEEFAETKGIDSATVLFIG GADKEGEVAVGPKDGSAKQPIPDTKKLSGVSEAIGAGTIFTNENKLPKLHLHSSFGRK DKTITGCTKAGGIDIWNIGEVIILELNNHSAYRKIDPETGFELLEV" misc_feature 22612..23055 /locus_tag="Acear_0016" /note="Domain of unknown function (DUF296); Region: DUF296; cl00720" /db_xref="CDD:193917" gene 23642..24226 /locus_tag="Acear_0017" /db_xref="GeneID:9511998" CDS 23642..24226 /locus_tag="Acear_0017" /note="KEGG: hypothetical protein; SPTR: Q7RBU8 Putative uncharacterized protein PY06038 (Fragment)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826634.1" /db_xref="GI:302390814" /db_xref="GeneID:9511998" /translation="MALDRFKKKKTESKVKIKGSHFKQRDKIKSEPSNSEQKINFKNN NEENIVTAKIKKKLLKEKTPLGKEEIQAESIDKLKNSTINHNNQQQYENELKKDNLQI NSIKQNCSNLKSSLKEVALQTEKMADNLDDLIGDTEELESSKRNKEKVENDGLGSNSN QDPLDTFSLDKVSIIIILHILLQRFFTDNQDNKK" gene 24314..24610 /locus_tag="Acear_0018" /db_xref="GeneID:9511999" CDS 24314..24610 /locus_tag="Acear_0018" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826635.1" /db_xref="GI:302390815" /db_xref="GeneID:9511999" /translation="MTDSAEMEEGREVDSISESETSIINSNQESDEPNEIKETSDNKT QEELKDKSPEAELQQKESNPYCIRTKMSGSTRLIIILIVILILQKITAGTDLFC" gene 24643..24849 /locus_tag="Acear_0019" /db_xref="GeneID:9512000" CDS 24643..24849 /locus_tag="Acear_0019" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826636.1" /db_xref="GI:302390816" /db_xref="GeneID:9512000" /translation="MSNEQSLEDVKTLINQFENFLSDNNREVMNKIVNELDSADGKSE IDQTKMKELISQLINQNNIDPSQL" gene 24920..25168 /locus_tag="Acear_0020" /db_xref="GeneID:9512001" CDS 24920..25168 /locus_tag="Acear_0020" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826637.1" /db_xref="GI:302390817" /db_xref="GeneID:9512001" /translation="MTMTDGGYEDFEDFMQNRLSNNDSNSAKQSLGGEDSMNETELEG EERPESRKRKKGKCSKNCGQIIIEKVEELEIEIDCCTD" gene 25304..25636 /locus_tag="Acear_0021" /db_xref="GeneID:9512002" CDS 25304..25636 /locus_tag="Acear_0021" /note="KEGG: hor:Hore_04100 hypothetical protein; SPTR: B8D1U1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826638.1" /db_xref="GI:302390818" /db_xref="GeneID:9512002" /translation="MFSLINRIKEKIGSLFKRTDCRNKDEIHLNLDGLEIIMERCFAY DKPHEVSVFVPRAELRKKMDDGEKTEEIEILLNSITVVHSPQRPSDEGEGSPPEPPEI PQDDVDNM" gene complement(25668..26255) /locus_tag="Acear_0022" /db_xref="GeneID:9512003" CDS complement(25668..26255) /locus_tag="Acear_0022" /note="COGs: COG3546 Mn-containing catalase; InterPro IPR007760:IPR012347:IPR009078; KEGG: hor:Hore_23050 manganese containing catalase; PFAM: manganese containing catalase; SPTR: B8D198 Manganese containing catalase; PFAM: Manganese containing catalase" /codon_start=1 /transl_table=11 /product="manganese containing catalase" /protein_id="YP_003826639.1" /db_xref="GI:302390819" /db_xref="GeneID:9512003" /translation="MWSYEKILQYPVKVKKNDLEMAKYLYAQYGGPDSELSAGIRYLT QRYTIPTDEAKATLTNIGTEELAHWEVLGALIYKLTEGVPVSKLRKAGLGAHYAEHGR ALYPHDAAGVPWTAAFIQSHEDPIATLHENLAAEEKARATYEYLINLSNDPGVVDTLC FLRQREVVHFQRFGETLEIVRDYLKDKDYKNGQCD" misc_feature complement(25713..26255) /locus_tag="Acear_0022" /note="Manganese catalase, ferritin-like diiron-binding domain; Region: Mn_catalase; cd01051" /db_xref="CDD:153110" misc_feature complement(order(25749..25751,25848..25850,26052..26054, 26061..26063,26151..26153)) /locus_tag="Acear_0022" /note="dimanganese center [ion binding]; other site" /db_xref="CDD:153110" gene complement(26274..26555) /locus_tag="Acear_0023" /db_xref="GeneID:9512004" CDS complement(26274..26555) /locus_tag="Acear_0023" /note="InterPro IPR016571; KEGG: hor:Hore_23040 spore coat protein CotJB; SPTR: B8D197 spore coat protein CotJB" /codon_start=1 /transl_table=11 /product="spore coat protein CotJB" /protein_id="YP_003826640.1" /db_xref="GI:302390820" /db_xref="GeneID:9512004" /translation="MSKKQLQYLKKIMALKFVVLELSLYLNTHPCDEIALEDHQKYAC KLKDLKRNYQQKYGPITADWCYKQSWQAECKEDYYWKYIRTEWPWQINY" misc_feature complement(26286..26543) /locus_tag="Acear_0023" /note="CotJB protein; Region: CotJB; pfam12652" /db_xref="CDD:193129" gene complement(26579..26758) /locus_tag="Acear_0024" /db_xref="GeneID:9512005" CDS complement(26579..26758) /locus_tag="Acear_0024" /note="KEGG: tte:TTE1799 hypothetical protein; SPTR: Q8R931 Putative uncharacterized protein; PFAM: spore coat associated protein JA (CotJA)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826641.1" /db_xref="GI:302390821" /db_xref="GeneID:9512005" /translation="MTEEEMEKVEFNIDYHPEYRLAQVYIPFQTYEEYYEPQEALKKG TFFPELYRPYRREKY" misc_feature complement(26597..26701) /locus_tag="Acear_0024" /note="Spore coat associated protein JA (CotJA); Region: CotJA; pfam11007" /db_xref="CDD:192695" gene 26930..27508 /locus_tag="Acear_0025" /db_xref="GeneID:9512006" CDS 26930..27508 /locus_tag="Acear_0025" /note="InterPro IPR010093; KEGG: hypothetical protein; SPTR: Q8IIG7 Uncharacterized protein PF11_0207; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Bacterial regulatory protein, Fis family; TIGRFAM: DNA binding domain, excisionase family" /codon_start=1 /transl_table=11 /product="DNA binding domain protein, excisionase family" /protein_id="YP_003826642.1" /db_xref="GI:302390822" /db_xref="GeneID:9512006" /translation="MSKSKYTISVEEAAKRLGVSRRTIYRRLNNDKLDGKKKRTKHGD KWFISEDEFSKQAEVIQEVVETERRVDINDLKQEIKEIFLETQKEIIKETIDKQREVI KEDIKDEIKKETEKIGNTVNEGLDQVKESFEETAVSIPQAIKEEQKEHREWINQRDRK LMRNIRRMQKKQNKEEEETNQGLWNKLIKVFR" misc_feature 26951..27088 /locus_tag="Acear_0025" /note="Helix-Turn-Helix DNA binding domain of transcription regulators from the MerR superfamily; Region: HTH_MerR-SF; cl02600" /db_xref="CDD:194374" gene 27916..29085 /locus_tag="Acear_0026" /db_xref="GeneID:9512007" CDS 27916..29085 /locus_tag="Acear_0026" /note="COGs: COG0075 serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192:IPR015421:IPR015424; KEGG: hmo:HM1_0852 soluble hydrogenase, small (42 kd) subunit, PFAM: aminotransferase class V; SPTR: B0TAQ7 Soluble hydrogenase, small (42 kd) subunit, PFAM: Aminotransferase class-V" /codon_start=1 /transl_table=11 /product="aminotransferase class V" /protein_id="YP_003826643.1" /db_xref="GI:302390823" /db_xref="GeneID:9512007" /translation="MSMKEKRTLMLPGPTPIPERARQAGAEKIIGHRELECEELVEEV VEGLKYVFQTEEDVLILTCSGTGGLEASIANTLSAGDKVLALCTGAFGERYATIAERY GVDVERMNFTWGEAVDVDRVKKRLEEDEAGEIKAILMTHNETSTGVVNNPEPIGELAE EHDVLLLVDAVSSLGGVELKVDEWGVDVAVTSSQKALMTPPGLCLVSVSKKALEAGKE ADSPKFYWSFKRAKDRYDRDTQTPSTPAISTLYVLRKVLREIKDEGLKNVFRRHEIVT KAIRKSMRALGLGLLVDDEIASTTVTAVRVPEGIEFNTLCQKLKEKYNVYITGSKGEL KGKVFRIGHLGNVSRVDILSTISALEMVLKEEGFDLELGTGLRAAQQVFYEEESR" misc_feature 27937..29007 /locus_tag="Acear_0026" /note="Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-...; Region: AGAT_like; cd06451" /db_xref="CDD:99744" misc_feature order(27979..27981,27988..27990,28009..28011,28015..28017, 28102..28107,28123..28125,28195..28197,28204..28206, 28216..28221,28495..28497,28516..28518,28588..28590, 28642..28653,28873..28875) /locus_tag="Acear_0026" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99744" misc_feature order(28105..28113,28186..28188,28345..28347,28420..28422, 28426..28428,28495..28500) /locus_tag="Acear_0026" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99744" misc_feature 28498..28500 /locus_tag="Acear_0026" /note="catalytic residue [active]" /db_xref="CDD:99744" gene 29085..30668 /locus_tag="Acear_0027" /db_xref="GeneID:9512008" CDS 29085..30668 /locus_tag="Acear_0027" /note="COGs: COG0111 phosphoglycerate dehydrogenase and related dehydrogenase; InterProIPR006139:IPR006140:IPR002912:IPR016040:IPR 006236; KEGG: hor:Hore_11540 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; SPTR: B8CX87 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase" /codon_start=1 /transl_table=11 /product="D-3-phosphoglycerate dehydrogenase" /protein_id="YP_003826644.1" /db_xref="GI:302390824" /db_xref="GeneID:9512008" /translation="MKVLVSDNISQAGIDILKDNGVDVTFNTELSYEELLEEIGKYDG IILRSMTPLNEEVLSQADNLKVIARAGSGYDNIDVEAASKRGIIVLNTPGQNTISAAE QTMALMLGLSRNLPQANEALHEGIWDRNKYQGVEINQKTLGIIGLGRVGGNVATRAKS FNMEVIANDPYIPAERGEKLGVELVGFKEVLKRSDYISIHTPLTDETYHILGKKEFAQ MKEGVRIVNAARGENVDTYELAEAIKEGKVAGAALDVHEEEPLKEEHPLLELEDRVIV SPHLGGTTVEAMDNVAIDAAKQAISVLRGDLPRTPLNAPALQPEAMKEIEPYVNLAKK LGAFYAQWGEGRIKELTISYRGELAEKEIGPVTTALLIGILNPILDTTVNSVNAGLIA EERGIDITESKSSTTERYSSLIELKVETEAGVNNLVGTVFDDTDLRIVEINGYRVNAI SEGNLLITNHTDKPGVVGKIGTLLGENDINIANMQLGRHDAGGEAVMVMGIDNELNSE VKEKLLTIDGISDIKEVNL" misc_feature 29085..30665 /locus_tag="Acear_0027" /note="D-3-phosphoglycerate dehydrogenase; Provisional; Region: PRK13581" /db_xref="CDD:184162" misc_feature 29397..29927 /locus_tag="Acear_0027" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 30447..30665 /locus_tag="Acear_0027" /note="C-terminal ACT (regulatory) domain of D-3-phosphoglycerate dehydrogenase (3PGDH); Region: ACT_3PGDH-xct; cd04902" /db_xref="CDD:153174" misc_feature order(30462..30464,30468..30470,30522..30524) /locus_tag="Acear_0027" /note="putative L-serine binding site [chemical binding]; other site" /db_xref="CDD:153174" gene 30743..32023 /locus_tag="Acear_0028" /db_xref="GeneID:9512009" CDS 30743..32023 /locus_tag="Acear_0028" /EC_number="6.1.1.11" /note="COGs: COG0172 Seryl-tRNA synthetase; InterProIPR015866:IPR002314:IPR010978:IPR018156:IPR 006195:IPR002317; KEGG: hor:Hore_21060 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: serine--tRNA ligase; SPTR: B8CZZ9 Seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="seryl-tRNA synthetase" /protein_id="YP_003826645.1" /db_xref="GI:302390825" /db_xref="GeneID:9512009" /translation="MLDLRFVRENTGLIKKVLEQRGTDANIDEFKEYDEKRRDVLYEV EQLKHRRNEASEKIGELKRKGEDASELIEEMREVSDKISELDEIVAECEEKINEILLT IPNIPHEDVPVGDDEEDNIVAWKWEEPTEFDFEPQPHWDIGEELDILDFERGAKVSGS RFTFLKNLGARLERALIAFMIDIHTEEHGYNEVFPPFIVRGESMVGTGQLPKFEEDAF KIEGTNHYLIPTAEVPVTNMYRDEIMDKDELPIYHVAYSGCFRAEAGAHGRDTRGIIR QHQFNKVELVKFVEPGTSYDELEKLVKNAEKVLQRLELPYRVMNMCTGDLGFTAAKKY DLEVWFPSYDTYREVSSCSNFEDFQARRAGIRYRPEPDAKAEFVHTLNGSGLAIGRTV AAILENYQQEDGSVIIPEALQPYMKGIEKITPKE" misc_feature 30743..32017 /locus_tag="Acear_0028" /note="seryl-tRNA synthetase; Provisional; Region: PRK05431" /db_xref="CDD:180077" misc_feature 30743..31063 /locus_tag="Acear_0028" /note="Seryl-tRNA synthetase N-terminal domain; Region: Seryl_tRNA_N; pfam02403" /db_xref="CDD:145510" misc_feature 31097..31990 /locus_tag="Acear_0028" /note="Seryl-tRNA synthetase (SerRS) class II core catalytic domain. SerRS is responsible for the attachment of serine to the 3' OH group of ribose of the appropriate tRNA. This domain It is primarily responsible for ATP-dependent formation of the enzyme...; Region: SerRS_core; cd00770" /db_xref="CDD:29815" misc_feature order(31199..31216,31223..31243,31253..31255,31259..31261, 31265..31267,31274..31276,31313..31324,31328..31336, 31340..31342,31394..31399,31403..31405,31415..31417, 31442..31444,31454..31456,31466..31468,31514..31516, 31577..31579,31985..31990) /locus_tag="Acear_0028" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29815" misc_feature order(31220..31222,31430..31432,31436..31438,31523..31525, 31529..31531,31547..31549,31556..31558,31565..31567, 31571..31573,31580..31582,31586..31588,31592..31594, 31784..31795,31886..31888,31892..31894,31910..31912) /locus_tag="Acear_0028" /note="active site" /db_xref="CDD:29815" misc_feature 31313..31336 /locus_tag="Acear_0028" /note="motif 1; other site" /db_xref="CDD:29815" misc_feature 31520..31531 /locus_tag="Acear_0028" /note="motif 2; other site" /db_xref="CDD:29815" misc_feature order(31895..31903,31910..31912) /locus_tag="Acear_0028" /note="motif 3; other site" /db_xref="CDD:29815" gene 32080..32175 /locus_tag="Acear_R0007" /db_xref="GeneID:9512010" tRNA 32080..32175 /locus_tag="Acear_R0007" /product="tRNA-Ser" /db_xref="GeneID:9512010" gene 32248..32333 /locus_tag="Acear_R0008" /db_xref="GeneID:9512011" tRNA 32248..32333 /locus_tag="Acear_R0008" /product="tRNA-Ser" /db_xref="GeneID:9512011" gene 32341..32436 /locus_tag="Acear_R0009" /db_xref="GeneID:9512012" tRNA 32341..32436 /locus_tag="Acear_R0009" /product="tRNA-Ser" /db_xref="GeneID:9512012" gene 32445..32521 /locus_tag="Acear_R0010" /db_xref="GeneID:9512013" tRNA 32445..32521 /locus_tag="Acear_R0010" /product="tRNA-Arg" /db_xref="GeneID:9512013" gene 32544..33011 /locus_tag="Acear_0029" /db_xref="GeneID:9512014" CDS 32544..33011 /locus_tag="Acear_0029" /EC_number="3.5.4.-" /note="COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR016192:IPR002125:IPR016193; KEGG: sca:Sca_0222 deaminase; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: C2LYF8 tRNA-specific adenosine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region" /codon_start=1 /transl_table=11 /product="tRNA-adenosine deaminase" /protein_id="YP_003826646.1" /db_xref="GI:302390826" /db_xref="GeneID:9512014" /translation="MDSDDEFYMKLALAEAQKAYDKAEVPIGAVVVKGDEVIARSHNL REKLADPTAHAEILAIKEAANTLGDWRLYNCTIYVTVEPCVMCAGALVQARVERLVYG TADLKAGAAGSILDLVQFSDFNHQLEVKSAILEDECKDIMESFFQDLRQGKIN" misc_feature 32568..32891 /locus_tag="Acear_0029" /note="Nucleoside deaminases include adenosine, guanine and cytosine deaminases. These enzymes are Zn dependent and catalyze the deamination of nucleosides. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a...; Region: nucleoside_deaminase; cd01285" /db_xref="CDD:29828" misc_feature order(32622..32624,32670..32672,32703..32711,32793..32795, 32802..32804) /locus_tag="Acear_0029" /note="nucleoside/Zn binding site; other site" /db_xref="CDD:29828" misc_feature order(32697..32699,32712..32714,32724..32726,32796..32801, 32808..32813,32820..32825) /locus_tag="Acear_0029" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29828" misc_feature order(32703..32711,32790..32795,32802..32804) /locus_tag="Acear_0029" /note="catalytic motif [active]" /db_xref="CDD:29828" gene 33031..33124 /locus_tag="Acear_R0011" /db_xref="GeneID:9512015" tRNA 33031..33124 /locus_tag="Acear_R0011" /product="tRNA-Ser" /db_xref="GeneID:9512015" gene 33273..33376 /gene="ffs" /locus_tag="Acear_R0012" /db_xref="GeneID:9512016" ncRNA 33273..33376 /gene="ffs" /locus_tag="Acear_R0012" /ncRNA_class="SRP_RNA" /product="SRP RNA; RNA component of signal recognition particle" /db_xref="GeneID:9512016" gene 33494..35254 /locus_tag="Acear_0030" /db_xref="GeneID:9512017" CDS 33494..35254 /locus_tag="Acear_0030" /EC_number="2.7.7.7" /note="COGs: COG2812 DNA polymerase III gamma/tau subunits; InterProIPR003959:IPR008921:IPR003593:IPR001270:IPR 012763; KEGG: hor:Hore_20790 DNA polymerase III subunits gamma/tau; PFAM: ATPase AAA; PRIAM: DNA-directed DNA polymerase; SMART: AAA ATPase; SPTR: B8CZX2 DNA polymerase III subunits gamma/tau; TIGRFAM: DNA polymerase III subunits gamma/tau; PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III subunits gamma/tau" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunits gamma/tau" /protein_id="YP_003826647.1" /db_xref="GI:302390827" /db_xref="GeneID:9512017" /translation="MSYLSLYRKWRPQTFSDIVGQQNVIQTLENAIKFDRIAHAYLFC GPRGTGKTSTAKVFSKALNCNDGPTVTPCSECKSCQKIEDNSSIDVIEIDAASNRGID EIRELREKVKFFPTEGNYKVYIIDEAHMLTKEAFNALLKTLEEPPEYVIFILATTEPH SLLPTILSRCQRFDFSRLSIQNLVQRLNFISQQEEIDLTAEAALAIARSAEGGMRDGI SLLDQIISYSGDRIEIDDVVTVLGLVDREVLFEMVEIITNNQVEQGLSLINDIVNQGK DLQQFVNSLIDHFRNLLIEKECRQINDLIELPTEQIEKIEEQSNKLTTTELLRLINVL IELESDLKQSNYPQVLLEMGIIELIKPEVDTSQEGILDRLTRLEERISTFQPSSDQSS VDKETEKVIKNREKSKSINKKEVKNKGPKVKESKEEIKQEDESKDNISFAQIQKRWTD ILEYLRKDEARTYAMLKEGRLSAVEDNGLIIAFDKKHGFHKENIDRKTGVIEKIIKKV LGLELKVKTVFSGSNKYKQQAENKKQENSNEQKPRSNQDTENPSKNKTEENSLKAAEN PLVKKVLDVFDGKIIKVEED" misc_feature 33494..35248 /locus_tag="Acear_0030" /note="DNA polymerase III subunits gamma and tau; Validated; Region: PRK05563" /db_xref="CDD:180131" misc_feature 33548..34009 /locus_tag="Acear_0030" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 33626..33649 /locus_tag="Acear_0030" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(33629..33652,33869..33871,33962..33964) /locus_tag="Acear_0030" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 33857..33874 /locus_tag="Acear_0030" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 33998..34000 /locus_tag="Acear_0030" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 34187..34570 /locus_tag="Acear_0030" /note="DNA polymerase III subunits gamma and tau domain III; Region: DNA_pol3_gamma3; pfam12169" /db_xref="CDD:152604" gene 35275..35583 /locus_tag="Acear_0031" /db_xref="GeneID:9512018" CDS 35275..35583 /locus_tag="Acear_0031" /note="COGs: COG0718 conserved hypothetical protein; InterPro IPR004401; KEGG: hor:Hore_20780 conserved hypothetical protein TIGR00103; PFAM: conserved hypothetical protein; SPTR: B8CZX1 Putative uncharacterized protein; PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: conserved hypothetical protein TIGR00103" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826648.1" /db_xref="GI:302390828" /db_xref="GeneID:9512018" /translation="MDMSKMMKQVQKMQSQMEDVQEELAEKKVEATAGGGVVKVVANG QQEIVDISIEPDAVDPDDVEMLEDLILAATNEAMRKVQDMASEEMGKLTGGMNIPGLF " misc_feature 35326..35580 /locus_tag="Acear_0031" /note="Uncharacterised BCR, YbaB family COG0718; Region: DUF149; cl00494" /db_xref="CDD:186034" gene 35600..36205 /locus_tag="Acear_0032" /db_xref="GeneID:9512019" CDS 35600..36205 /locus_tag="Acear_0032" /note="COGs: COG0353 recombinational DNA repair protein (RecF pathway); InterProIPR015967:IPR006171:IPR000093:IPR003583:IPR 006154; KEGG: hor:Hore_20770 recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein; Helix-hairpin-helix DNA-binding class 1; SPTR: B8CZX0 recombination protein recR; TIGRFAM: recombination protein RecR; PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR" /codon_start=1 /transl_table=11 /product="DNA replication and repair protein RecR" /protein_id="YP_003826649.1" /db_xref="GI:302390829" /db_xref="GeneID:9512019" /translation="MKYYAKPIAKLIGKLTKLPGIGPKSAQRLAFYIMNDSDEEVEEL VDAIKDVKDRIDYCEVCNNLTEHERCNICSNDERNRSVICIVESPKDIIAMEKTGEYN GLYHVLHGSISPMEGVGPDDIEIKGLLSRIEDEDEEVEEVILATDPNVEGEATAMYIA RLLKPLGITASRIAHGLPVGGDLEYADEVTLSKALEGRKQV" misc_feature 35606..36202 /locus_tag="Acear_0032" /note="recombination protein RecR; Reviewed; Region: recR; PRK00076" /db_xref="CDD:178844" misc_feature 35714..35836 /locus_tag="Acear_0032" /note="RecR protein; Region: RecR; pfam02132" /db_xref="CDD:145340" misc_feature 35840..36181 /locus_tag="Acear_0032" /note="TOPRIM_recR: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in Escherichia coli RecR. RecR participates in the RecFOR pathway of homologous recombinational repair in prokaryotes. This pathway provides a...; Region: TOPRIM_recR; cd01025" /db_xref="CDD:173775" misc_feature order(35858..35863,35870..35872,36038..36040,36044..36046, 36050..36052) /locus_tag="Acear_0032" /note="putative active site [active]" /db_xref="CDD:173775" misc_feature order(35858..35860,36038..36040) /locus_tag="Acear_0032" /note="putative metal-binding site [ion binding]; other site" /db_xref="CDD:173775" misc_feature order(35876..35884,35888..35893,36014..36016,36020..36022, 36032..36034,36041..36043,36077..36079,36107..36142, 36146..36148,36161..36163,36167..36169,36173..36181) /locus_tag="Acear_0032" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:173775" gene 36276..36530 /locus_tag="Acear_0033" /db_xref="GeneID:9512020" CDS 36276..36530 /locus_tag="Acear_0033" /note="KEGG: hor:Hore_20750 hypothetical protein; SPTR: C0GJ89 Putative uncharacterized protein; PFAM: protein of unknown function (DUF2508)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826650.1" /db_xref="GI:302390830" /db_xref="GeneID:9512020" /translation="MNQISDKLNSYYKEMKAELVTLEDLDPTIDEELENARQEWREAR RYFERVEDPYLIDYAIYSLEAAEAKYNYLIKKARRLKSHQ" misc_feature <36366..36524 /locus_tag="Acear_0033" /note="Protein of unknown function (DUF2508); Region: DUF2508; pfam10704" /db_xref="CDD:151198" gene 36999..37574 /locus_tag="Acear_0034" /db_xref="GeneID:9512021" CDS 36999..37574 /locus_tag="Acear_0034" /EC_number="1.2.7.1" /note="COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752:IPR002869:IPR011894; KEGG: hor:Hore_20740 pyruvate ferredoxin oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; PRIAM: Pyruvate synthase; SPTR: B8CZW7 Pyruvate ferredoxin oxidoreductase, gamma subunit; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family" /codon_start=1 /transl_table=11 /product="pyruvate ferredoxin oxidoreductase, gamma subunit" /protein_id="YP_003826651.1" /db_xref="GI:302390831" /db_xref="GeneID:9512021" /translation="MANLTEIRWHGRGGQGAKTASILLGKVASKTGKNIQAFPEYGPE RMGAPVLAFNRISDEELTVHCQVTEPSIVTVLDPTLLEAVDVTEGIPADGKIIINTTK SPTDVKKELDFEGEVYTVDADGISTDEIGAAFPNTPMLGALVKVTDLLEFDNFKEQVE KEFKKKFASKPEVIDGNMKSIERAYQEVKSE" misc_feature 37008..37565 /locus_tag="Acear_0034" /note="Pyruvate ferredoxin/flavodoxin oxidoreductase; Region: POR; cl00546" /db_xref="CDD:193862" gene 37574..37885 /locus_tag="Acear_0035" /db_xref="GeneID:9512022" CDS 37574..37885 /locus_tag="Acear_0035" /note="COGs: COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase delta subunit; InterPro IPR017900:IPR001450:IPR017896:IPR011898; KEGG: kol:Kole_0380 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C5CDT6 Pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family" /codon_start=1 /transl_table=11 /product="pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit" /protein_id="YP_003826652.1" /db_xref="GI:302390832" /db_xref="GeneID:9512022" /translation="MAAKKDAQKPGWKEVPEGGLILEAGNATEYKTGGWRTHRPELDI DQCINCHRCWIYCPDSAIVSEDEEVTGFDHDYCKGCGICAHECPVDAISMIKEEPSTE E" misc_feature 37634..37867 /locus_tag="Acear_0035" /note="2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family; Region: PorD_KorD; TIGR02179" /db_xref="CDD:131234" misc_feature <37703..>37858 /locus_tag="Acear_0035" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" gene 37906..39087 /locus_tag="Acear_0036" /db_xref="GeneID:9512023" CDS 37906..39087 /locus_tag="Acear_0036" /EC_number="1.2.7.1" /note="COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR019775:IPR002880:IPR015941:IPR009014; KEGG: hor:Hore_20720 pyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: B8CZW5 Pyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: domain" /codon_start=1 /transl_table=11 /product="pyruvate ferredoxin oxidoreductase, alpha subunit" /protein_id="YP_003826653.1" /db_xref="GI:302390833" /db_xref="GeneID:9512023" /translation="MSNEVALTGHEVIANAMRQINPDVVAAYPITPQTEIVQLFSQFV ADGKVDTDFVTVESEHSAMSATVGASAGGARAMTATAANGLALMWEIVYIAASTRLPI VMPVVNRALSGPINIHCDHSDAMGARDSGWIQLYAEDAQEAYDNAVQAVRIGEHEDVR LPVMVNMDGFIISHAVENMELLADEDVQEFVGEYEPENTLLDSENPITVGPIDLQDFY FEHKRQQVDAMENAKDVIADIAQEYKEMTGRGVEYFEEYKLDDAEIGILALGSTAGTA KVAVDDLREQGVKAGLLKLRMFRPFPTEELVEALKDLEVLAVMDRADTFSTTGGPVFA DVRSAFYDAKADVEVVNYIYGLGGRDTRVEDIESIYEDLQEIAASGKVENRVNYLGVR E" misc_feature 37930..39081 /locus_tag="Acear_0036" /note="pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed; Region: porA; PRK09622" /db_xref="CDD:181999" misc_feature 37930..38412 /locus_tag="Acear_0036" /note="Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins; Region: TPP_PYR_PFOR_IOR-alpha_like; cd07034" /db_xref="CDD:132917" misc_feature order(37975..37980,37996..37998,38008..38010,38017..38019, 38065..38076,38095..38100,38104..38112,38119..38121, 38125..38127,38176..38178,38185..38187,38197..38199, 38236..38241,38287..38292) /locus_tag="Acear_0036" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132917" misc_feature order(37975..37980,37987..37992,37996..37998,38014..38019, 38065..38076,38095..38100,38104..38112,38119..38121, 38125..38127,38176..38178,38185..38187) /locus_tag="Acear_0036" /note="PYR/PP interface [polypeptide binding]; other site" /db_xref="CDD:132917" misc_feature order(37990..37992,38080..38082) /locus_tag="Acear_0036" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132917" misc_feature order(37996..37998,38230..38232) /locus_tag="Acear_0036" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:132917" gene 39100..40032 /locus_tag="Acear_0037" /db_xref="GeneID:9512024" CDS 39100..40032 /locus_tag="Acear_0037" /note="COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: csc:Csac_1461 thiamine pyrophosphate binding domain-containing protein; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: A4XJH6 Thiamine pyrophosphate enzyme domain protein TPP-binding; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain" /codon_start=1 /transl_table=11 /product="thiamine pyrophosphate protein domain protein TPP-binding protein" /protein_id="YP_003826654.1" /db_xref="GI:302390834" /db_xref="GeneID:9512024" /translation="MSKVNLKELSHQDERLTGGHRLCSGCGASIIVRQILHATQDPVV VGCATGCLEVSTTIYPYTAWKDSFIHNAFENSAATVSGVEAAYRSLKKQGKIDEETKF LAFGGDGGTYDIGFQSLSGAMERGHDMVYVCYDNGAYMNTGIQRSSATPRNASTTTSP AGEVIPGKQQFRKELTDIVAAHNIPYVAQASPHKFKDLVRKAKKAFEVEGPAFLNVLS PCPRGWRYPEDEAMDLLRSATDSCFWPLYECEDGEWKLNYKPKEKAPITDWLKPQGRF KHVFKEGNEHLVDEIQEHVDQRWETILHRCGETE" misc_feature 39136..40005 /locus_tag="Acear_0037" /note="pyruvate ferredoxin oxidoreductase subunit beta; Provisional; Region: PRK11865" /db_xref="CDD:183346" misc_feature 39145..39858 /locus_tag="Acear_0037" /note="TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria. PFOR catalyzes the...; Region: TPP_PFOR_porB_like; cd03376" /db_xref="CDD:48185" misc_feature order(39181..39183,39250..39252,39316..39321,39418..39429, 39505..39507,39511..39513,39517..39525) /locus_tag="Acear_0037" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:48185" misc_feature order(39223..39228,39268..39270,39298..39315,39322..39324, 39331..39336,39343..39348,39352..39357,39364..39366, 39397..39399,39445..39447,39457..39462,39478..39480, 39523..39528,39541..39543,39562..39564,39568..39570, 39577..39579,39604..39606,39616..39618,39628..39633, 39640..39642,39760..39765,39778..39789) /locus_tag="Acear_0037" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:48185" gene complement(40084..40251) /locus_tag="Acear_0038" /db_xref="GeneID:9512025" CDS complement(40084..40251) /locus_tag="Acear_0038" /note="InterPro IPR017900:IPR001450:IPR000813:IPR017896; KEGG: pth:PTH_1256 ferredoxin; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C0GIU7 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003826655.1" /db_xref="GI:302390835" /db_xref="GeneID:9512025" /translation="MAFKVTDECVACETCLDECPEDAIEEGDIYSIDEDECIECGICA DECPTEAIIEE" misc_feature complement(40093..>40239) /locus_tag="Acear_0038" /note="RPB11 and RPB3 subunits of RNA polymerase; Region: RNAP_RPB11_RPB3; cl11409" /db_xref="CDD:196219" gene 40532..41407 /locus_tag="Acear_0039" /db_xref="GeneID:9512026" CDS 40532..41407 /locus_tag="Acear_0039" /note="COGs: COG0714 MoxR-like ATPase; InterPro IPR011704:IPR003593; KEGG: mta:Moth_0825 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: Q2RK97 ATPase associated with various cellular activities, AAA_5; PFAM: AAA domain (dynein-related subfamily)" /codon_start=1 /transl_table=11 /product="ATPase associated with various cellular activities AAA_5" /protein_id="YP_003826656.1" /db_xref="GI:302390836" /db_xref="GeneID:9512026" /translation="MEITKEELRAGFKEENYICGEEVRIPTYLALKLEKPLLITGEPG VGKTEIAKVLSNFFNTELIRLQCYEGLDENKALYEWNYQKQLINIQINKDNKSENLIE EDIFSEDYLLERPLLKSIKAEKRPVLLIDEIDKTDEEFEAFLFELLSDFQVSIPELGT VAAKQKPIVVLTSNANRELSDGLKRRCIFLYIDLPSIEKEVEIIRTKVPGIGDKLSRD IAAAISYLRVNLDLKKKPSISETLDWARALVGLDADRLSPELIQRTRTLFLKNKNDLD SFDELGAKRLIREIN" misc_feature 40592..41332 /locus_tag="Acear_0039" /note="MoxR-like ATPases [General function prediction only]; Region: COG0714" /db_xref="CDD:31058" misc_feature 40640..>40936 /locus_tag="Acear_0039" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" gene 41445..42893 /locus_tag="Acear_0040" /db_xref="GeneID:9512027" CDS 41445..42893 /locus_tag="Acear_0040" /note="COGs: COG3552 protein containing von Willebrand factor type A (vWA) domain; InterPro IPR008912; KEGG: dae:Dtox_0807 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SPTR: C1TCM7 protein containing von Willebrand factor type A (VWA) domain; PFAM: VWA domain containing CoxE-like protein" /codon_start=1 /transl_table=11 /product="VWA containing CoxE family protein" /protein_id="YP_003826657.1" /db_xref="GI:302390837" /db_xref="GeneID:9512027" /translation="MQDSDDLVKEVDESINIFSAEEKPDYVENNMIKFIQILRNLGIK ISLAESIEAMEALKLTDIIDKKEVKATLRSLLVKNNYEREIFDEAFEAFFVAQKEKQQ RQEARKQEIKQQEEAKRKAEEDLTFKREKGISNKDEELELNLTDEQKETYTQLPEEAK QKIRDYIEDSFPGHLQYSSNVQPMLEKMVGGLLNYWKRQLKNSDQERQQQHDLESKLT GDLEMDTVIQQVVSSLQEDESLLTQDLKKIPEEKLSQVTMIIKKLSHKLATKISRRFQ NSLKTDKIDLRKTIRNNIKYGGVMLDLEYKTKKIQKPKFLVICDVSDSMARYATFVLQ FIYGISSAIQDIESFIFSEDLERITEYFNSNLSFKDTMAKVITNSEEWGETTNLNQAL ETFQHQHLDLLTPETILFIMSDTKTLQYKEAAAKLEDMRDHLKDIVWLNTLDQSEWDE LESVQAFKEVTRMVECYTIKHLNNSLKINILT" misc_feature 41532..>41726 /locus_tag="Acear_0040" /note="Protein containing von Willebrand factor type A (vWA) domain [General function prediction only]; Region: CoxE; COG3552" /db_xref="CDD:33354" misc_feature 42258..42860 /locus_tag="Acear_0040" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cl00057" /db_xref="CDD:197401" gene 43161..44633 /locus_tag="Acear_0041" /db_xref="GeneID:9512028" CDS 43161..44633 /locus_tag="Acear_0041" /EC_number="1.1.1.205" /note="COGs: COG0516 IMP dehydrogenase/GMP reductase; InterProIPR015875:IPR001093:IPR000644:IPR013785:IPR 005990:IPR018529; KEGG: gwc:GWCH70_0009 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; hypothetical protein; PRIAM: IMP dehydrogenase; SMART: hypothetical protein; SPTR: C5D335 Inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="inosine-5'-monophosphate dehydrogenase" /protein_id="YP_003826658.1" /db_xref="GI:302390838" /db_xref="GeneID:9512028" /translation="MENKFEKEGLTFDDVLLIPAKSDVLPKEVDVSTHLTSDIELNTP ILSAGMDTVTEAELAIAMAREGGIGIIHKNMSVEQQAEEVDKVKRSESGVIVNPFYLT PDNFAYEAEHLMSKFKISGVPIVNNEEDMKLVGIITNRDLRFEKDFDQKLSEVMTKEG LVTGPVGTTLEDAEDILQEYKIEKLPLVDDEYRLKGLITIKDIEKAEKYPNAAKDEQG RLLVGAAVGTSRDTWSRIEALTDAGVDVIVIDTAHGHSTKVIDLVREIKEEYSKLNLI AGNVATAGATKDLIEAGADAIKVGIGPGSICTTRVVAGVGVPQITAVYDCAKEAEKFG VPVIADGGIKYSGDIVKALAAGASTVMLGSLLAGTKESPGEIEIYKGRSYKVYRGMGS VGAMKEGSKDRYFQEEKKKLIPEGVEGRTPYKGELSDTIYQLVGGLRSGMGYCGAEDI ETLKEEGKFTRITGAGLRESHPHDIEVTKESPNYNLESRE" misc_feature 43164..44612 /locus_tag="Acear_0041" /note="inosine 5'-monophosphate dehydrogenase; Reviewed; Region: PRK05567" /db_xref="CDD:180134" misc_feature 43185..>43424 /locus_tag="Acear_0041" /note="TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate...; Region: TIM_phosphate_binding; cl09108" /db_xref="CDD:195791" misc_feature 43443..43778 /locus_tag="Acear_0041" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein. IMPDH is an essential enzyme that catalyzes the first step unique to GTP synthesis, playing a key...; Region: CBS_pair_IMPDH; cd04601" /db_xref="CDD:73101" misc_feature <43779..44546 /locus_tag="Acear_0041" /note="IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the...; Region: IMPDH; cd00381" /db_xref="CDD:73364" misc_feature order(44073..44081,44178..44180,44184..44186,44247..44252, 44319..44321,44325..44333,44403..44408) /locus_tag="Acear_0041" /note="active site" /db_xref="CDD:73364" gene 44797..45429 /locus_tag="Acear_0042" /db_xref="GeneID:9512029" CDS 44797..45429 /locus_tag="Acear_0042" /EC_number="2.7.4.9" /note="COGs: COG0125 Thymidylate kinase; InterPro IPR000062:IPR018094; KEGG: mta:Moth_0042 thymidylate kinase; PFAM: thymidylate kinase; PRIAM: dTMP kinase; SPTR: Q2RMF8 Thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase" /codon_start=1 /transl_table=11 /product="thymidylate kinase" /protein_id="YP_003826659.1" /db_xref="GI:302390839" /db_xref="GeneID:9512029" /translation="MKGLFITLEGPEGAGKSTQIELLNKYFSEQGYEVVQTREPGGTE IGSRIRNILLDSNLDNLEPKTELLLYAASRAQHVNEVIKPALKEGKVIICDRFSDATL AYQGYGRRLDKDLILKLNQMATGGLEPDLTFLLDIEPEEGLLRTKNEVRDRIEREDLS FHQQVRDGYLKLAEKKSRFEVIDGSQSIENIFDNLIETLEERLELNEDSE" misc_feature 44797..45408 /locus_tag="Acear_0042" /note="thymidylate kinase; Validated; Region: tmk; PRK00698" /db_xref="CDD:179089" misc_feature 44806..45399 /locus_tag="Acear_0042" /note="Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor. TMPK represents the rate-limiting...; Region: TMPK; cd01672" /db_xref="CDD:30190" misc_feature order(44845..44847,45004..45006,45016..45018,45079..45084, 45106..45108,45241..45243) /locus_tag="Acear_0042" /note="TMP-binding site; other site" /db_xref="CDD:30190" misc_feature order(44848..44850,45229..45231,45346..45348) /locus_tag="Acear_0042" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:30190" gene 45413..45868 /locus_tag="Acear_0043" /db_xref="GeneID:9512030" CDS 45413..45868 /locus_tag="Acear_0043" /note="COGs: COG1728 conserved hypothetical protein; InterPro IPR005585; KEGG: hor:Hore_15530 hypothetical protein; PFAM: protein of unknown function DUF327; SPTR: C6Q6P9 Putative uncharacterized protein; PFAM: protein of unknown function (DUF327)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826660.1" /db_xref="GI:302390840" /db_xref="GeneID:9512030" /translation="MKIQNDLKKDLNQLLNKSKLQTSESVKSSDNKFLDTLQEVHDAN TKERLDELLGQIDKQGERLSQKRTFKELVRYKKMVQQFVKEAVEKMYRVKEEFSTYGS GNHKVYNLVVKVDESLEELTELVLDKQSTQLEILDRLDEVRGMLVDIYT" misc_feature 45476..45865 /locus_tag="Acear_0043" /note="Protein of unknown function (DUF327); Region: DUF327; cl00753" /db_xref="CDD:193929" gene 45897..46886 /locus_tag="Acear_0044" /db_xref="GeneID:9512031" CDS 45897..46886 /locus_tag="Acear_0044" /EC_number="2.7.7.7" /note="COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR008921:IPR004622; KEGG: hor:Hore_20360 DNA polymerase III subunit delta'; PRIAM: DNA-directed DNA polymerase; SPTR: B8CZS9 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III subunits gamma/tau" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit delta'" /protein_id="YP_003826661.1" /db_xref="GI:302390841" /db_xref="GeneID:9512031" /translation="MAFGDVVGQDTPIDILQNGLKRDRVNHAYLFAGKKGVGKEFTAV QFAKALNCKERKSDACGECISCRKFNSGNHPDIVNIEPEGKYIKIDQIRSLQQNTSYK PYESEWKIYIIKQADRMNLQAANGLLRTLEEPPKYVVIILLASKEDLLLPTITSRCQI IKFRTLTVDEITDRLISRFELDRAEAEKIAILADGSLGKAIEFIENEDTLTTREIILD ELKELNGLDIVEVFELVQKILDYKEEIDGILESIITFYRDLLLYKGSQKEELLINFDY QEEVIKLSREYTFDELQSIIEEIEQTNNLVQNTNVKLQLALEVMLLNIKEKRV" misc_feature 45936..46496 /locus_tag="Acear_0044" /note="DNA polymerase III, delta' subunit; Region: holB; TIGR00678" /db_xref="CDD:161993" misc_feature <46209..>46391 /locus_tag="Acear_0044" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature <46629..46868 /locus_tag="Acear_0044" /note="DNA polymerase III subunit delta'; Validated; Region: PRK07940" /db_xref="CDD:181175" gene 46892..47716 /locus_tag="Acear_0045" /db_xref="GeneID:9512032" CDS 46892..47716 /locus_tag="Acear_0045" /note="COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: hor:Hore_20350 PSP1 domain protein; PFAM: PSP1 domain protein; SPTR: B8CZS8 PSP1 domain protein; PFAM: PSP1 C-terminal conserved region" /codon_start=1 /transl_table=11 /product="PSP1 domain protein" /protein_id="YP_003826662.1" /db_xref="GI:302390842" /db_xref="GeneID:9512032" /translation="MHTIVGVTFGKAEKIYYFDPADIELVVGDNVIVETSRGVEFGEV VMPPQEVPDEEVVYPLKEVIRKATSSDFKTKKENDEDEEEAFDICLEKIDEHGLPMKL IEVEYTFDRNKIIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMVGGLGP CGRQLCCETVLRDFEPISIKMAKAQNLSLNPAKISGICGRLMCCLKYECDNYKKAKKK MPNVGDKVETDFGVGEVINLNVVKKTVKVSLNNSDKLEFSIDEVKTIEEEDEASDD" misc_feature 46892..47683 /locus_tag="Acear_0045" /note="PSP1 C-terminal conserved region; Region: PSP1; cl00770" /db_xref="CDD:153984" gene 47911..48261 /locus_tag="Acear_0046" /db_xref="GeneID:9512033" CDS 47911..48261 /locus_tag="Acear_0046" /note="COGs: COG4467 conserved hypothetical protein; InterPro IPR010377; KEGG: hor:Hore_20340 hypothetical protein; PFAM: protein of unknown function DUF972; SPTR: B8CZS7 Uncharacterized protein conserved in bacteria; PFAM: protein of unknown function (DUF972)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826663.1" /db_xref="GI:302390843" /db_xref="GeneID:9512033" /translation="MEEILSLLATFQEKLNMLNDDFQKIKKITHRLYKENEELKEENE NLKRLLFEQKAENEEEPEAREGYNNLAKLYEEGFHICHLNFGEKRDGECLFCMGLLDI QLDSEVEADKVVQD" misc_feature <48106..48201 /locus_tag="Acear_0046" /note="Protein of unknown function (DUF972); Region: DUF972; cl01853" /db_xref="CDD:194201" gene 48248..49018 /locus_tag="Acear_0047" /db_xref="GeneID:9512034" CDS 48248..49018 /locus_tag="Acear_0047" /note="COGs: COG4123 O-methyltransferase; InterPro IPR002052:IPR013216; KEGG: cpy:Cphy_3911 methyltransferase type 11; PFAM: methyltransferase type 11; SPTR: C6LAP7 Putative N-6 adenine-specific DNA methylase; PFAM: methyltransferase small domain" /codon_start=1 /transl_table=11 /product="methyltransferase type 11" /protein_id="YP_003826664.1" /db_xref="GI:302390844" /db_xref="GeneID:9512034" /translation="MSRIELKKDERLDDLIHSNLQIIQSSNHFAFAIDAVLLADFVEI KPKDRVIDLGTGTGVIPLLLTGKNDPDQIVGIEIQVKLAEMAQRSVLYNKLEDVIEIK KADIRQLKEVFAAESFDVVVSNPPYLPLGQGKVNPDSSIALARHELKVKLEDVVEISS YLVRYKGRVSYIYRVERLDELLEVMNYYNLQPKYMRLIQPEGDKACNLVLVTGIKGAN SGLEVDKPLIIYRDNGEYTEEVLKIYYGEDYNYKGKGS" misc_feature 48260..48988 /locus_tag="Acear_0047" /note="Predicted O-methyltransferase [General function prediction only]; Region: COG4123" /db_xref="CDD:33880" misc_feature 48392..>48643 /locus_tag="Acear_0047" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature order(48404..48424,48476..48481,48557..48565,48617..48619) /locus_tag="Acear_0047" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 49023..49271 /locus_tag="Acear_0048" /db_xref="GeneID:9512035" CDS 49023..49271 /locus_tag="Acear_0048" /note="COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: hmu:Hmuk_1139 excinuclease ABC C subunit domain protein; PFAM: excinuclease ABC C subunit domain protein; SPTR: C7P236 excinuclease ABC C subunit domain protein; PFAM: GIY-YIG catalytic domain" /codon_start=1 /transl_table=11 /product="excinuclease ABC C subunit domain protein" /protein_id="YP_003826665.1" /db_xref="GI:302390845" /db_xref="GeneID:9512035" /translation="MGHYVYILRCADETLYTGYTTDLDRRVKEHNQGQGAKYTRGRKP VELVYSEEYRTRSSAQKREYEIKTYSRQKKLDLVKNSS" misc_feature 49029..49262 /locus_tag="Acear_0048" /note="GIY-YIG catalytic domain; Region: GIY-YIG; cl01061" /db_xref="CDD:194023" gene 49291..50151 /locus_tag="Acear_0049" /db_xref="GeneID:9512036" CDS 49291..50151 /locus_tag="Acear_0049" /note="COGs: COG0313 methyltransferase; InterPro IPR018063:IPR000878:IPR014777:IPR008189; KEGG: hor:Hore_20320 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: B8CZS5 uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: conserved hypothetical protein TIGR00096" /codon_start=1 /transl_table=11 /product="uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase" /protein_id="YP_003826666.1" /db_xref="GI:302390846" /db_xref="GeneID:9512036" /translation="MSETKLYICGTPIGNLEDISLRALKILKKVDYIAAEDTRRTQNL LNHYEIDAELISYHEHNEEEKSTKIIQMLKSGQEIALVSDAGMPGISDPGYKLTSLAD EEGIRVVPIPGPTAMTAALVASGLPTDKFVFEGFLPRKEKQRQERLKELSAETRTLVF YESPYRLKDSLQNMLDILGDRKIAVWREITKKFEEKISGQVSEVLGHFEDEDPKGEIT IVLDGLDADQLHYKEAAWKDLTILEHLQLMMDKGVTKKEAVKLVAKERGLPKREVYEE AIVIDAQVKK" misc_feature 49291..50124 /locus_tag="Acear_0049" /note="Predicted methyltransferases [General function prediction only]; Region: COG0313" /db_xref="CDD:30661" misc_feature 49291..50124 /locus_tag="Acear_0049" /note="Tetrapyrrole (Corrin/Porphyrin) Methylases; Region: TP_methylase; cl00304" /db_xref="CDD:197405" gene complement(50223..50468) /locus_tag="Acear_0050" /db_xref="GeneID:9512037" CDS complement(50223..50468) /locus_tag="Acear_0050" /note="InterPro IPR007159:IPR006339; KEGG: sth:STH3253 sporulation-related transcriptional regulator AbrB; PFAM: SpoVT/AbrB domain protein; SPTR: Q67JB5 sporulation-related transcriptional regulator AbrB; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family" /codon_start=1 /transl_table=11 /product="AbrB family transcriptional regulator" /protein_id="YP_003826667.1" /db_xref="GI:302390847" /db_xref="GeneID:9512037" /translation="MKSTGIVRKVDELGRVVIPVELRRTLEIEEKDSLEIYVDGESII LKKYEPACVFCGEAGNTTNFKGKTICYKCLAEMTESA" misc_feature complement(<50316..50468) /locus_tag="Acear_0050" /note="SpoVT / AbrB like domain; Region: SpoVT_AbrB; cl00877" /db_xref="CDD:186236" gene 50632..51624 /locus_tag="Acear_0051" /db_xref="GeneID:9512038" CDS 50632..51624 /locus_tag="Acear_0051" /note="InterPro IPR018977; KEGG: bha:BH0051 hypothetical protein; PFAM: NurA domain; SPTR: Q9KGL0 BH0051 protein; PFAM: NurA domain" /codon_start=1 /transl_table=11 /product="NurA domain protein" /protein_id="YP_003826668.1" /db_xref="GI:302390848" /db_xref="GeneID:9512038" /translation="MLEVSAKLKEDLTNANQELQQKYSKKSGLNKQDLRAKIKQKLSG IIKLNQMSEDSLEAWTDNRVIVGVDGSVNKLGSNYPHYLCLLQALAKSTAKEDIIETE LFCPLVSSSKEEINKFILDQQQQGNTGISKQYAANKIKISKLAELELEVALQAIKEWQ PKLIMLDGSLIRYRIEAEEKWSELKETAISQEILLVGVIEEIGTQEVGKEVDEELAEF YDRELLFGVLNRGEMLTLEFKRSLKTVFLRTSRDPQVIGLDILEEQQSELQNMAELIY TLTPEDSRGIPIWLDVVDHEVRISDKMMESLIDAYLDSSLKKRLFASKREERVY" misc_feature 50818..51528 /locus_tag="Acear_0051" /note="NurA domain; Region: NurA; cl09134" /db_xref="CDD:195800" gene 52134..53990 /locus_tag="Acear_0052" /db_xref="GeneID:9512039" CDS 52134..53990 /locus_tag="Acear_0052" /note="COGs: COG0433 ATPase; InterPro IPR002789; KEGG: bcl:ABC0060 hypothetical protein; PFAM: protein of unknown function DUF87; SPTR: Q5WLX2 Putative uncharacterized protein; PFAM: Domain of unknown function DUF87" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826669.1" /db_xref="GI:302390849" /db_xref="GeneID:9512039" /translation="MQVVGLTTQQEVYVASKERKFRSNEILKILDSELDNPLGEVIET QSYNRFIPLSIEDSFVDKGVIESLRSIGYNIDEDEINIAKVRLLTEAIYPVKTGAAVE IPEFDEVKDLMIKEEPDQGLVLGIIRGTEEMTAEMDDKLQNIAPLLEDDEITSQEGIP FNFKLRAMHQYPHIGIFGGSGSGKSFGMRVMLEELMKLEVPTLVFDPHFEMDFSEDFA GLPEEYKVDFDDRFEIFQVGQDVGVNFEDLSTKDLTELLSAASDLSESMSNVVESLHN TKGKRDSLLTFKNRLHDLQEAMNEGKNKIQRRLRSGELSGQNKEQYQDYLGLLEDYGS LHLSSINGVIWRLNRLERDGLFRQSITDIEDALKRRQSVVIQGTIRLLQVFSTYLLGN LYRQRRDYKDADYRGETADYFPPFVIATDEAHNFAPKGYESPAKRILKQISQEGRKYG TFLILATQRPTLLEETVTAQLNTKFVFRTVRASDIEIIKQETDLTAEEAKRLPYLRSG DAFMSSAIFGRTMPIRIRVAKTTSPHTENPFDELEAKTEADQEEFYNLIADQLPIHDS DLLTPLKEVNKRLDGGVLNVNSLQDRLENLAAKGKIEKEESVLGDVTYNLEK" misc_feature 52206..53741 /locus_tag="Acear_0052" /note="HerA helicase [Replication, recombination, and repair]; Region: COG0433" /db_xref="CDD:30782" misc_feature 52695..53312 /locus_tag="Acear_0052" /note="Domain of unknown function DUF87; Region: DUF87; pfam01935" /db_xref="CDD:145224" misc_feature <53196..53516 /locus_tag="Acear_0052" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" gene 54372..56306 /locus_tag="Acear_0053" /db_xref="GeneID:9512040" CDS 54372..56306 /locus_tag="Acear_0053" /EC_number="6.1.1.10" /note="COGs: COG0143 methionyl-tRNA synthetase; InterProIPR001412:IPR015413:IPR002547:IPR014729:IPR 012340:IPR009080:IPR016027:IPR014758:IPR002304:IPR004495; KEGG: hor:Hore_20300 methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; SPTR: B8CZS3 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: Anticodon-binding domain; tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="methionyl-tRNA synthetase" /protein_id="YP_003826670.1" /db_xref="GI:302390850" /db_xref="GeneID:9512040" /translation="MTKDTFYVTTPIYYPNDKLHIGHTYTTTAADTVVKFKELQGYET ELITGSDEHGQKLQKTAEEHGMEPLGYIDGIVKTFKELWSTLEVDYTEFVRTTSQEHK KDVQHIFKKIYDKGDIYKDKYEGYYCTPCETYWAERELDEEGNCPDCNRPVEWVEEES YFFKMSEYEEQLLEFLDDNPDFIQPAKRRNEMINFIEEGLEDLCVSRTSFDWGIPVPI DGDHVIYVWFDALISYLTGIGFRRDEDKFGSYWPADVHIVGKDILRFHTIIWPAILMA ADMELPKQVFGHGFLTVEGGKMSKSKGNVVDPTKLVNDFGVDAVRYYLMREVAFGTDG SYSTESFIRRINSDLANDLGNLLNRTVAMVEQYFDGVIPEPRSETEYDADLKKTSQQE LAAMADDMENLQFSTALEHLWTVIRRTNKYIDQTTPWILAKDEDKQDKLGTVLYNLLE ALRITAIALKPFLPEAPAKIWQQIGIKADLDQQRWSEVEEWGLLEAGLEVNPGDPIFP RIDAEEYFAKQAEAEDDEKEETEEMVEEDKITFDDFTKLDLRVAEVLEAERIEGSDKL LKLQVALGEERRQLVAGIAKHYEADELIGKKVLMVANLEPATIFGTESNGMVLAASDD EGELTLTTVDQDIASGSQVE" misc_feature 54372..56300 /locus_tag="Acear_0053" /note="methionyl-tRNA synthetase; Reviewed; Region: PRK12267" /db_xref="CDD:183389" misc_feature 54384..55379 /locus_tag="Acear_0053" /note="catalytic core domain of methioninyl-tRNA synthetases; Region: MetRS_core; cd00814" /db_xref="CDD:173907" misc_feature order(54402..54407,54411..54413,54522..54524,55050..55052, 55059..55064,55071..55073,55155..55157,55167..55169) /locus_tag="Acear_0053" /note="active site" /db_xref="CDD:173907" misc_feature 54429..54440 /locus_tag="Acear_0053" /note="HIGH motif; other site" /db_xref="CDD:173907" misc_feature 55260..55274 /locus_tag="Acear_0053" /note="KMSKS motif; other site" /db_xref="CDD:173907" misc_feature 55404..55793 /locus_tag="Acear_0053" /note="Anticodon-binding domain of methionyl tRNA synthetases; Region: Anticodon_Ia_Met; cd07957" /db_xref="CDD:153411" misc_feature order(55407..55409,55428..55433,55440..55445,55452..55457, 55464..55469,55476..55481,55629..55634,55638..55643, 55656..55658) /locus_tag="Acear_0053" /note="tRNA binding surface [nucleotide binding]; other site" /db_xref="CDD:153411" misc_feature order(55428..55430,55440..55445,55452..55457,55464..55469, 55476..55481,55638..55640,55656..55658) /locus_tag="Acear_0053" /note="anticodon binding site; other site" /db_xref="CDD:153411" misc_feature 55986..56300 /locus_tag="Acear_0053" /note="tRNA-binding-domain-containing Escherichia coli methionyl-tRNA synthetase (EcMetRS)-like proteins. This family includes EcMetRS and Aquifex aeolicus Trbp111 (AaTrbp111). This domain has general tRNA binding properties. MetRS aminoacylates methionine...; Region: tRNA_bind_EcMetRS_like; cd02800" /db_xref="CDD:48402" misc_feature order(55989..55991,56130..56132,56178..56186,56193..56195, 56229..56234,56238..56243,56259..56261,56265..56267, 56271..56273,56280..56282,56292..56300) /locus_tag="Acear_0053" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48402" misc_feature order(56064..56066,56100..56102,56178..56180,56190..56192, 56211..56213,56220..56222) /locus_tag="Acear_0053" /note="putative tRNA-binding site [nucleotide binding]; other site" /db_xref="CDD:48402" gene 56323..57090 /locus_tag="Acear_0054" /db_xref="GeneID:9512041" CDS 56323..57090 /locus_tag="Acear_0054" /note="COGs: COG0084 Mg-dependent DNase; InterPro IPR018228:IPR001130:IPR015991:IPR012278; KEGG: hor:Hore_21920 hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; SPTR: B8D0K2 Hydrolase, TatD family; TIGRFAM: hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family" /codon_start=1 /transl_table=11 /product="hydrolase, TatD family" /protein_id="YP_003826671.1" /db_xref="GI:302390851" /db_xref="GeneID:9512041" /translation="MLVDTHAHIDFPRFDDDRDKVIKRAKENNLEYIINVGADEASSQ RSVELAQHHDMIYAVVGVHPHEAKSVTEETYSRLKEWAAEDKVVAIGETGLDYHYDNS PRQVQQQVFRRHIRLAKEVDLPLVIHSREAEDQTMELLKEEEAEEVGGIIHCFPGDQK MANQALDLNFYIAVGGILTFNNSYQLQRVVKQIPLDRLLLETDAPYLTPEPNRGKRNE PAYIKYVADKLAQILPHSTEKIAAVTTENAKEAFSIA" misc_feature 56326..57084 /locus_tag="Acear_0054" /note="putative deoxyribonuclease YjjV; Provisional; Region: PRK11449" /db_xref="CDD:171118" misc_feature 56326..57081 /locus_tag="Acear_0054" /note="TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity; Region: TatD_DNAse; cd01310" /db_xref="CDD:30053" misc_feature order(56338..56340,56344..56346,56704..56706,56779..56781, 56929..56931) /locus_tag="Acear_0054" /note="active site" /db_xref="CDD:30053" gene 57172..57777 /locus_tag="Acear_0055" /db_xref="GeneID:9512042" CDS 57172..57777 /locus_tag="Acear_0055" /note="InterPro IPR007197; KEGG: drm:Dred_1747 radical SAM domain-containing protein; PFAM: radical SAM domain protein; SPTR: A4J5B9 radical SAM domain protein; PFAM: radical SAM superfamily" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003826672.1" /db_xref="GI:302390852" /db_xref="GeneID:9512042" /translation="MDITYGLGDSLYLNLTNRCTNQCEFCVRQYKDGIAGYNLRLDKE PTVKEVIAEIENPEDYEEIVFCGYGEPLIRLEAVIEIADWLQKFDVAVRINTNGQANL IHQRNIVPELKGLIDTISISLNAKNAKKYKQLCNPEFGLDTFPAILDFIEECKGIIPN VVLSVVKYPTTSIYECRKIAENLGVEFKVRQYSQSDTKEDN" misc_feature 57208..>57597 /locus_tag="Acear_0055" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature order(57226..57228,57232..57234,57238..57240,57244..57249, 57259..57261,57367..57369,57376..57381,57454..57462, 57535..57537) /locus_tag="Acear_0055" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" gene 57807..58454 /locus_tag="Acear_0056" /db_xref="GeneID:9512043" CDS 57807..58454 /locus_tag="Acear_0056" /EC_number="2.2.1.2" /note="COGs: COG0176 transaldolase; InterPro IPR018225:IPR001585:IPR013785:IPR004731; KEGG: hor:Hore_21800 transaldolase; PFAM: transaldolase; PRIAM: transaldolase; SPTR: B8D0J0 Putative transaldolase; TIGRFAM: transaldolase; PFAM: transaldolase; TIGRFAM: transaldolase, , TalC family" /codon_start=1 /transl_table=11 /product="transaldolase" /protein_id="YP_003826673.1" /db_xref="GI:302390853" /db_xref="GeneID:9512043" /translation="MKLFIDTANIDEIKDMNQLGILSGVTTNPSLIAKESGQSFEDII EEITSVVDGPVSAEVISTEAEGMVEQARELASISDNVVIKIPMTKEGLTAVNQLSQEG IKTNVTLVFSANQALLAAKAGATYVSPFMGRLDDIGHNGVEVVKEIVQIFKEYELETE IIAASVRHPKHVKKVAKAGSDIATIPYGVLEKMLGHPKTDEGLDKFLADWEEAQE" misc_feature 57810..58439 /locus_tag="Acear_0056" /note="Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea; Region: Transaldolase_FSA; cd00956" /db_xref="CDD:188643" misc_feature order(57822..57824,57885..57890,58056..58058,58194..58196, 58296..58298) /locus_tag="Acear_0056" /note="active site" /db_xref="CDD:188643" misc_feature order(57855..57857,57864..57866,57891..57896,57903..57905, 57912..57914,57924..57926,57978..57980,57996..57998, 58014..58016,58074..58076,58080..58085,58092..58094, 58149..58151,58194..58196,58200..58202,58209..58211, 58215..58217,58266..58271,58308..58310,58314..58316, 58332..58337,58344..58346,58392..58394,58398..58403, 58410..58412,58422..58427,58431..58436) /locus_tag="Acear_0056" /note="intersubunit interactions; other site" /db_xref="CDD:188643" misc_feature 58056..58058 /locus_tag="Acear_0056" /note="catalytic residue [active]" /db_xref="CDD:188643" gene 58531..59403 /locus_tag="Acear_0057" /db_xref="GeneID:9512044" CDS 58531..59403 /locus_tag="Acear_0057" /EC_number="2.1.1.-" /EC_number="2.1.1.48" /note="COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); InterPro IPR020596:IPR001737:IPR020598:IPR011530; KEGG: bbe:BBR47_00900 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; PRIAM: rRNA (adenine-N(6)-)-methyltransferase; SMART: Ribosomal RNA adenine methylase transferase-like; SPTR: C0ZHC6 Dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase" /codon_start=1 /transl_table=11 /product="dimethyladenosine transferase" /protein_id="YP_003826674.1" /db_xref="GI:302390854" /db_xref="GeneID:9512044" /translation="MEKRIANPSTTREILEENGIQLKKSLGQNFLVDRNIIDKIIVSA DLTSYDHVIEIGPGIGSLTQRLAEGAKAVWAIELDERFIKILEENLSNYNNVNFIQAD ALEYDFEQLLTKLSGESIKVVANLPYYITTPIIMRLLEEKLPFERVVVMVQKEVAERI VATPEDGKKYGSLSLAVRYYSQPEITGTVPRTVFMPQPKVDSAIVKMEIRDKPPVEVK DEELLFKVIQAAFQQRRKTIRNSLSKAANLDLKRDLVDQALDKVDIESRRRGEKLDLE RFTALSNSIFDLLS" misc_feature 58684..58953 /locus_tag="Acear_0057" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature order(58693..58713,58759..58764,58831..58839,58903..58905) /locus_tag="Acear_0057" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 59410..59619 /locus_tag="Acear_0058" /pseudo /db_xref="GeneID:9512045" gene 59726..59992 /locus_tag="Acear_0059" /db_xref="GeneID:9512046" CDS 59726..59992 /locus_tag="Acear_0059" /note="COGs: COG4466 Uncharacterized protein; InterPro IPR009366; KEGG: hor:Hore_21690 hypothetical protein; PFAM: protein of unknown function DUF1021; SPTR: B8D0H9 Uncharacterized protein conserved in bacteria; PFAM: protein of unknown function (DUF1021)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826675.1" /db_xref="GI:302390855" /db_xref="GeneID:9512046" /translation="MGDNILEQIKSDLESFVGKEVSLKANQGRRKIIKKEGVLEETYS NVFVVKVEEDRAPRKVSYSYADILTETVEVQIKNNNTKIGCVSV" misc_feature 59735..59947 /locus_tag="Acear_0059" /note="Protein of unknown function (DUF1021); Region: DUF1021; cl01852" /db_xref="CDD:154626" gene 60101..60871 /locus_tag="Acear_0060" /db_xref="GeneID:9512047" CDS 60101..60871 /locus_tag="Acear_0060" /note="COGs: COG1414 transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: mta:Moth_1180 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; SPTR: C0GIL8 transcriptional regulator, IclR family; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator" /codon_start=1 /transl_table=11 /product="IclR family transcriptional regulator" /protein_id="YP_003826676.1" /db_xref="GI:302390856" /db_xref="GeneID:9512047" /translation="MAKKKVVQSVDRSLIILEALADKGKPMALSNLAEEIDLNISTVH RLLNTLRLRGFIEQEEDSGKYYLGLKTFEIGNAAKKNINLISIAKPYMQDLVDQCNET TNLAILDEGEVVYIEQVASTNMVKMFAQIGSRGPAYCTGTGKALLAYEDPDQWSELFA KMDFGKFTDNTKVDSEVLRAELKEIRQQGYAIDRGEMEEGVRCVAAPIKNHEGEVIAA VSVSGPSIRLTEKYIEEEVIETVVEIAGQISARLGYRI" misc_feature 60119..60385 /locus_tag="Acear_0060" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 60122..60862 /locus_tag="Acear_0060" /note="Transcriptional regulator [Transcription]; Region: IclR; COG1414" /db_xref="CDD:31604" misc_feature 60491..60853 /locus_tag="Acear_0060" /note="Bacterial transcriptional regulator; Region: IclR; pfam01614" /db_xref="CDD:144993" gene 61082..62422 /locus_tag="Acear_0061" /db_xref="GeneID:9512048" CDS 61082..62422 /locus_tag="Acear_0061" /EC_number="1.4.1.4" /note="COGs: COG0334 glutamate dehydrogenase/leucine dehydrogenase; InterProIPR006097:IPR006096:IPR016040:IPR006095:IPR 014362; KEGG: cth:Cthe_0374 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; PRIAM: glutamate dehydrogenase (NADP(+)); SPTR: C6P885 glutamate dehydrogenase (NADP(+)); PFAM: glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain" /codon_start=1 /transl_table=11 /product="glutamate dehydrogenase (NADP)" /protein_id="YP_003826677.1" /db_xref="GI:302390857" /db_xref="GeneID:9512048" /translation="MSEYIAEVMDQVKERNPDEPEFHQAVKEVLESLEPVFEKDPKYK EAGILERIVEPERQIIFRVPWVDDEGNVQVNRGFRVEFNSALGPYKGGLRFHPTVNVG LIKFLGFEQIFKNALTGRPIGGGKGGSDFNPKGKSDGEIMRFCQSFMTELYRHIGPDT DVPAGDIGVGGREIGYLFGQYKKIVNAFEAGVLTGKGLDWGGSLVRTEATGYGLTYMA EEMLKDQNDSLEGKRVVISGSGNVAIYATEKVQELGGKVVALSDSDGYVYDPEGIDLE AVKQIKEVERGRIKEYAEGRSEVEFCPESFDIWDVECDVALPCATQNELDGESAQTLV DNGVMLVGEGANMPSTPEAIKIFKENDVLFAPGKAANAGGVATSAIEMTQNSMRESWS FDRVDETLNDIMVDIYDVSQEKAAEYGKEGDLIAGANIAGFLKVADAMLDQGVV" misc_feature 61082..62419 /locus_tag="Acear_0061" /note="glutamate dehydrogenase; Provisional; Region: PRK09414" /db_xref="CDD:181834" misc_feature 61244..61636 /locus_tag="Acear_0061" /note="Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Region: ELFV_dehydrog_N; pfam02812" /db_xref="CDD:190436" misc_feature 61661..62416 /locus_tag="Acear_0061" /note="NAD(P) binding domain of glutamate dehydrogenase, subgroup 2; Region: NAD_bind_2_Glu_DH; cd05313" /db_xref="CDD:133455" misc_feature order(61799..61807,61865..61870,62039..62044,62111..62119) /locus_tag="Acear_0061" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:133455" gene 62530..63372 /locus_tag="Acear_0062" /db_xref="GeneID:9512049" CDS 62530..63372 /locus_tag="Acear_0062" /EC_number="1.8.1.-" /note="COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterProIPR008333:IPR001433:IPR019480:IPR017938:IPR 017927:IPR012165; KEGG: mta:Moth_1518 ferredoxin-NADP(+) reductase subunit alpha; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: A1HNJ2 Oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain" /codon_start=1 /transl_table=11 /product="sulfide dehydrogenase (flavoprotein) subunit SudB" /protein_id="YP_003826678.1" /db_xref="GI:302390858" /db_xref="GeneID:9512049" /translation="MFEIIEKKALASEIVSLIVEAPLIAAKAEPGHFVVVRVSETGER IPLTIADYNRDRETIELIIQAVGYSTIQLSKLEEGDQLLDVLGPLGEPVEIEKLGRVV CVAGGIGVAPIYPKAKELKEAGNEIISIIGAQTEEKLIMQDRMESISEELYLATDDGS IGHEGFVTEVLESVLEENEVDEVIAIGPVVMMKAACEVTADYGIDTVVSLNPIMVDGT GMCGGCRVTVGGENRFACVDGPAFDGHKVDFVELMRRQDHYHPQEEKAMHRCKLEEEV GRDG" misc_feature 62530..63342 /locus_tag="Acear_0062" /note="ferredoxin-NADP(+) reductase subunit alpha; Reviewed; Region: PRK06222" /db_xref="CDD:180476" misc_feature 62533..63273 /locus_tag="Acear_0062" /note="FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-...; Region: DHOD_e_trans_like1; cd06219" /db_xref="CDD:99815" misc_feature order(62656..62658,62662..62673,62713..62721,62731..62739, 62851..62853,63163..63168) /locus_tag="Acear_0062" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99815" misc_feature order(62662..62664,62668..62673) /locus_tag="Acear_0062" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99815" misc_feature order(62734..62736,62743..62745,62752..62754,62764..62766, 62791..62793,62797..62799) /locus_tag="Acear_0062" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99815" misc_feature order(62836..62838,62848..62859,62863..62865) /locus_tag="Acear_0062" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99815" misc_feature order(62851..62856,62923..62931,63088..63093) /locus_tag="Acear_0062" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99815" misc_feature order(63175..63177,63190..63192,63199..63201,63235..63237) /locus_tag="Acear_0062" /note="Iron coordination center [ion binding]; other site" /db_xref="CDD:99815" gene 63365..64741 /locus_tag="Acear_0063" /db_xref="GeneID:9512050" CDS 63365..64741 /locus_tag="Acear_0063" /EC_number="1.8.1.-" /note="COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR012285:IPR009051:IPR006004; KEGG: dhd:Dhaf_3501 glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B8FQ58 glutamate synthase (NADPH), homotetrameric; TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric" /codon_start=1 /transl_table=11 /product="sulfide dehydrogenase (flavoprotein) subunit SudA" /protein_id="YP_003826679.1" /db_xref="GI:302390859" /db_xref="GeneID:9512050" /translation="MANRQKMKKQQPEKRINNFQEVACGYTKEEAVKEAERCLQCKDS PCVDGCPVEVPIPDFIEEITNENFDQAAELVKEKNALPAICGRVCPQAEQCEAECILG KKGQPVAIGALERFVGDYELKQDREIEAKTDKDIKTAVVGSGPAGLTAAADMAKLGYQ VTVFEALSDPGGVLRYGIPEFRLPKSIVDEEVQEIENLGVEVRPNTLIGSTLTFDDLQ EEGYEAVFVSTGAGLPYFLGIPGENLNGVYSANEFLTRVNLMNAYRFPEYQTPIEVGD HVAVVGAGNVAMDSARTALRLGAEEVSIVYRRSRNEMPAREEEIEHAEEEGIDFKLLR NPVKILGNEEDWVAELECVEMELGEPDSSGRPRPIPIEDSNFTIPVETVVIAIGQGPN PLLSKKELNLETTEWNSIVVDDDTYQTSIPGVFAGGDVIGGSATVIAAMGDGRKAARE IDKYLQQK" misc_feature 63374..64738 /locus_tag="Acear_0063" /note="putative oxidoreductase; Provisional; Region: PRK12831" /db_xref="CDD:183780" misc_feature <63443..>63688 /locus_tag="Acear_0063" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" misc_feature 63773..>63880 /locus_tag="Acear_0063" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 64193..64396 /locus_tag="Acear_0063" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" gene 64861..65871 /locus_tag="Acear_0064" /db_xref="GeneID:9512051" CDS 64861..65871 /locus_tag="Acear_0064" /note="InterPro IPR009003; KEGG: hor:Hore_21680 hypothetical protein; SPTR: B8D0H8 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826680.1" /db_xref="GI:302390860" /db_xref="GeneID:9512051" /translation="MERIQSLVKKYYNQILSLKNVVGVGCGYKEVDNTETDDEALVVL VEEKLDKDELESHELVPEQIENTDTDVVEVGELELLASRMERLRPAQPGVSIGHYRVS AGTFGAVVKDRQTKEPLILSNNHVLANLSTGHDDRAKKGDPILQPGQHDKGERDRDVI GHLERFSPLHRKTEPASSAVIQGVENLLNGVGDVVKFPYLIKFIRKNKTSNLVDCAVA KPVSEDVISDKILEIGKVEGIKQPKVGMGVVKSGRTSGRTESKIKAVHATVEVSITGN EKGVFNDQIITKPFSKPGDSGSLILDHDRSAVGLLFAGSEKSTVCNRISNVLDELKVE FI" gene 66065..66301 /locus_tag="Acear_0065" /db_xref="GeneID:9512052" CDS 66065..66301 /locus_tag="Acear_0065" /note="COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167:IPR008988; KEGG: hor:Hore_05060 FeoA family protein; PFAM: FeoA family protein; SPTR: B8D237 FeoA family protein; PFAM: FeoA domain" /codon_start=1 /transl_table=11 /product="FeoA family protein" /protein_id="YP_003826681.1" /db_xref="GI:302390861" /db_xref="GeneID:9512052" /translation="MNYMTLHQLKQGASGKVIDFNGGCGLVNKLNSMGIREGKEITKI SNSFIGGPVTVQLDNAKIAIGNGMAEKIIIEENN" misc_feature 66074..66292 /locus_tag="Acear_0065" /note="FeoA domain; Region: FeoA; cl00838" /db_xref="CDD:193951" gene 66301..68112 /locus_tag="Acear_0066" /db_xref="GeneID:9512053" CDS 66301..68112 /locus_tag="Acear_0066" /note="COGs: COG0370 Fe2+ transport system protein B; InterProIPR002917:IPR011642:IPR011640:IPR006073:IPR 005225; KEGG: hor:Hore_05070 ferrous iron transporter protein FeoB; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; ferrous iron transport B domain protein; SPTR: B8D238 ferrous iron transporter protein FeoB; TIGRFAM: small GTP-binding protein; PFAM: ferrous iron transport protein B; ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain" /codon_start=1 /transl_table=11 /product="small GTP-binding protein" /protein_id="YP_003826682.1" /db_xref="GI:302390862" /db_xref="GeneID:9512053" /translation="MNVFLMGNPNVGKSALFSRLTGTNVTSSNYAGTTVEYTAGKMEW QDDVIDIIDVPGTYSLDPTNQAEEVAVEMISDADLIINVLDATNLERNLNLTLQLLEQ DVPMIVALNFWDEVQHRGIEIDIDKLEEYLGVPVIPTSATKGNGIRNLIELFDYRKVT QYDSRTTEERWSEIGKIVEEVQAIDYDGHSWLDRLEDLSIKPLTGLPIAIFVLLLSFK IIRFIGEGLIGYVTEPFFEVVYRPVIMWLSELLGSQGFIHDLLIGQLVEGQVDFEQSF GLLTTGIFIPFAAVLPYIIAFYFILGFLEDTGYLPRLSVLSDNLMHKVGLHGFSIIPM ILGFGCNVPAALAVRTLESRREKFIASTLMAISVPCMSQTAMIVGLLGSYSNKYIWYV FGTLAVVWIIAGFLLNKLLPGFSSDLLLEIPPLRIPNPGIVVKKLWIRMLSFLREAIP FMLAGVLIVNIFYFLGVFDLMAVILGPVLDKVFGLPQEAISALLMGFLRKDLAMGMLV PLDLTVKQSVIASVILTIYFPCVATFMVLIRELGFVDMLKATAVMLISTLVVGGFVNF AFQGGGFTPQSWLVLVGIVLLIRFLPNIVENEEVNSV" misc_feature 66307..67983 /locus_tag="Acear_0066" /note="Fe2+ transport system protein B [Inorganic ion transport and metabolism]; Region: FeoB; COG0370" /db_xref="CDD:30719" misc_feature 66313..66756 /locus_tag="Acear_0066" /note="Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this...; Region: FeoB; cd01879" /db_xref="CDD:133280" misc_feature 66319..66342 /locus_tag="Acear_0066" /note="G1 box; other site" /db_xref="CDD:133280" misc_feature order(66328..66330,66334..66345,66631..66636,66640..66642, 66718..66726) /locus_tag="Acear_0066" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133280" misc_feature 66397..66411 /locus_tag="Acear_0066" /note="Switch I region; other site" /db_xref="CDD:133280" misc_feature 66400..66402 /locus_tag="Acear_0066" /note="G2 box; other site" /db_xref="CDD:133280" misc_feature 66457..66468 /locus_tag="Acear_0066" /note="G3 box; other site" /db_xref="CDD:133280" misc_feature order(66466..66522,66526..66531) /locus_tag="Acear_0066" /note="Switch II region; other site" /db_xref="CDD:133280" misc_feature 66631..66642 /locus_tag="Acear_0066" /note="G4 box; other site" /db_xref="CDD:133280" misc_feature 66718..66726 /locus_tag="Acear_0066" /note="G5 box; other site" /db_xref="CDD:133280" misc_feature 67168..67449 /locus_tag="Acear_0066" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" misc_feature 67465..67620 /locus_tag="Acear_0066" /note="Ferrous iron transport protein B C terminus; Region: FeoB_C; pfam07664" /db_xref="CDD:191804" misc_feature 67633..67929 /locus_tag="Acear_0066" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" gene 68241..69866 /locus_tag="Acear_0067" /db_xref="GeneID:9512054" CDS 68241..69866 /locus_tag="Acear_0067" /note="COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: asa:ASA_1441 glycosyl transferase, group 2 family protein; PFAM: glycosyl transferase family 2; SPTR: B3KA02 glycosyl transferase family 2; PFAM: glycosyl transferase family 2" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_003826683.1" /db_xref="GI:302390863" /db_xref="GeneID:9512054" /translation="MVRLIFHLQTLLNRIENLLIKDLLADLEEELEIEIYFQQQDLNL IEYKQVDLVITDNYTTAKLLSERKTIQVIYWYRGWNDNLETNNQSDFTVVVTEDSKLD SLPDNLQERAVVIPFGVKEEFYKSISEEKLITIEKRRIIIPGYGLTRKEIEFLINAVE LINDTCPIEVIILSRDELIFDTEVAYKVIDIESSQERIIQYASAELALVIKGKRNYRL TTLELMASQTPIIIIDKDISWNSIIDDYSELIEFNRKQIGVRALKLLRDNTSAKKLIK KGWEIAKSHQWQKTIQRWSDLITEESADIDLGISKERRIDIILVNNNKPKILKDCVRN IQENTDFNYRIVVIDNYGCRSSLQDFRSSSGLVIIEPKKGLGYAQAYNYGIKAGSSQY ILLMDTSFRTTVGWLDSLLSILQRENEAAIVKPQIWNEDKERIGLELNELFEQTSFQS EEEWLNTNRAVYLFGRELVADLGYFDKYYSFYFETIDYLLQAKRIGYNFYDSKESNLY KVKQEAGFTVKESQELINDRELFIRRWKPADLK" misc_feature <68565..69131 /locus_tag="Acear_0067" /note="Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate...; Region: Glycosyltransferase_GTB_type; cl10013" /db_xref="CDD:186885" misc_feature 69189..69731 /locus_tag="Acear_0067" /note="Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Region: Glyco_tranf_GTA_type; cl11394" /db_xref="CDD:197438" misc_feature order(69198..69200,69204..69206,69282..69284,69429..69431, 69435..69437) /locus_tag="Acear_0067" /note="active site" /db_xref="CDD:132997" gene 70127..70891 /locus_tag="Acear_0068" /db_xref="GeneID:9512055" CDS 70127..70891 /locus_tag="Acear_0068" /note="COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: sth:STH564 hypothetical protein; PFAM: SCP-like extracellular; SPTR: C0GJB8 SCP-like extracellular; PFAM: cysteine-rich secretory protein family; TIGRFAM: uncharacterized protein, YkwD family" /codon_start=1 /transl_table=11 /product="SCP-like extracellular" /protein_id="YP_003826684.1" /db_xref="GI:302390864" /db_xref="GeneID:9512055" /translation="MRGDKYIASLLIIVLLLPSLMVLFWTGPVYAVSGLDNLESNSSF LSVLKGLVALFILNKIIGNGDSASAEPPQEDDPTPIDNGDNNSEDNVVIEEPGDNEDS SYSDQKDNSSTDETATDWTEMEVTSMTSAEAEMLQLLNQERTQRGLEPLQVDLRLVQV ARAKSQNMIDEDYFAHQSPTLGSPFDMMQALNISYDFAGENIAGAGTVARAHKHLMES PGHRENILRPRFTHVGIGIIEGGPYGMMFSQEFIDK" misc_feature 70520..70879 /locus_tag="Acear_0068" /note="SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5...; Region: SCP_bacterial; cd05379" /db_xref="CDD:88558" gene 71708..72799 /locus_tag="Acear_0069" /db_xref="GeneID:9512056" CDS 71708..72799 /locus_tag="Acear_0069" /note="KEGG: predicted protein; SPTR: B1GA94 transcriptional regulator, AraC family; PFAM: CryBP1 protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826685.1" /db_xref="GI:302390865" /db_xref="GeneID:9512056" /translation="MSKFNLQEKNNSNVNGNDFAVEVPFCCVQVVPGNLEVVEDRLEA EDLKMTFTPKLECCIKEEDLSCIADNVSCSIDGEVLRLVGCIEYAISTINGTPDPVRG DFSTEAPQQNSADVSCKSTVCVNEIICCGQDLECPDDLDLNEITVNFEDAKVKDCPKW ADEPDKKIIKFTGKFRLPTLPTCPDENGNGNGDGNGNGNGNGNDNGDNGDEEVCGCQV TGDLNTGGNPDERVDLNLQVCTGCTPENSLVSYNNTLEDNDIQLDLSPDDEEPEGIDL VTCEEIAEIEGGLRATIEGQASVTVGEDSFAACDFTIVVTDTPPPTSDTIEEVEIICD DQSVHTVTEPIEGAQAINIQDICPLPPQQ" misc_feature 71774..72238 /locus_tag="Acear_0069" /note="CryBP1 protein; Region: CryBP1; pfam07029" /db_xref="CDD:148570" gene 72945..73778 /locus_tag="Acear_0070" /db_xref="GeneID:9512057" CDS 72945..73778 /locus_tag="Acear_0070" /note="KEGG: hypothetical protein LOC759625; PFAM: CryBP1 protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826686.1" /db_xref="GI:302390866" /db_xref="GeneID:9512057" /translation="MTADNVLEYFRAEDDSEASTEEEVEITVFSAEDNSDDSLGDFNL AAEEIGEQVEDDETEIEAEEVEEQVENSSQQDKNKKGGENMEEQEVNLQHGSDDFAAE VPFCCVQVVPGNLEVIEDRLEAEDLKMTFTPKLECCIKEEMLECTANGANCQIDGKVV RLVGCIEYAISTINDIPDPIRGEFSTEAPQQNSADVSCKSTVCVNEIICCCERDESTL IDTDLCDDLDSLLDNIEVKFKAAKVKDCPKWADEPDKKIIKFTGKFKLPKLNNLPASN S" misc_feature 73218..>73574 /locus_tag="Acear_0070" /note="CryBP1 protein; Region: CryBP1; pfam07029" /db_xref="CDD:148570" gene 74034..74684 /locus_tag="Acear_0071" /db_xref="GeneID:9512058" CDS 74034..74684 /locus_tag="Acear_0071" /note="InterPro IPR016160" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826687.1" /db_xref="GI:302390867" /db_xref="GeneID:9512058" /translation="MKTYRLEEEQVYSTQQREVSRPQVYSTYLDRCGNRQNRESKPSK QSPINRLVYKKQNLIRNGDFSHWKNQDQPKFWQGKNITQTSTSKTGAKAVQLNQITDG ESKNGSQLWQKGECCSNIKVNLQFSIATLIIDSSKPLPCNPEITVELNWLDSKGDKLD TGLEFIIPADSIPAAQWTFFSRVSSAAPQGTEGFLLLFAVDAGTPVALDNLNLITL" gene 74720..76024 /locus_tag="Acear_0072" /db_xref="GeneID:9512059" CDS 74720..76024 /locus_tag="Acear_0072" /note="KEGG: hor:Hore_21430 hypothetical protein; SPTR: B8D0F2 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826688.1" /db_xref="GI:302390868" /db_xref="GeneID:9512059" /translation="MSNFEQQVNLKRLELDRTVNKIKDIKAEVEAVESKVREGKIIFS GVVAEDIIYVGQEGIIYHQFEELDFSICLPVEKESEDQEVELTPWIEYLDFQLADEGK HLEQKIMLKVHTLLMKESQLKVKPGAADTYRVAVIVNEVEKEQIIEDKFSFRSEMNRL KQVEEATAEVKNLESKLVSGQAIIQGKLRQQFFFCDEQDISRQEERESTFDVSVDIPD VNSDLQLEVEPLIDSLDWQVIGPETISTRIVLKLQLRIIDFREMGLALNPTGPTMVLD EAVLSNQKQTIEVNTFELESFASNIRNIDVELTDLELGMISDYIIVEGQLEYDIYYLA NLQTEPNVECYQQEAVPFSTLIKTCGIETGMEVVIKEATEVEEIELLNNKTLKQETLI DLEVSVFKREQVNVTVDETGRLITGQVVIDEGIEEFIIDIST" misc_feature 74780..75019 /locus_tag="Acear_0072" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" misc_feature 75620..75856 /locus_tag="Acear_0072" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" gene complement(76077..77447) /locus_tag="Acear_0073" /db_xref="GeneID:9512060" CDS complement(76077..77447) /locus_tag="Acear_0073" /note="COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: ctc:CTC01975 Na(+)-linked D-alanine glycine permease; PFAM: sodium:alanine symporter; SPTR: Q892W1 Na(+)-linked D-alanine glycine permease; TIGRFAM: amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein" /codon_start=1 /transl_table=11 /product="amino acid carrier protein" /protein_id="YP_003826689.1" /db_xref="GI:302390869" /db_xref="GeneID:9512060" /translation="MQKQLLSFFNAASGIVWGVPMLVLLIGTGIYLTLRLRFITITKL PHALKLIFTKNDDEGEGDVSGFEALATALSSTIGTGNIAGVATAISLGGPGAALWMWI AALFGTATKFAEGVLAVKYRVKNEAGEMSGGPMYYIEKGLGKKWRPLAIFFAFCGILV SWFGIGATVQANSLADALDANFGISTWVSGTIMAILVGMVVLGGIKRIAKVAGKIVPL MSALYILSIAYILLTNLGELPEAISLIITSAFNGQSAVGGFAGAGVMMAIKRGVSRGV FSNEAGVGSAPIAHASAKTNSPVRQGLIAMTGTFIDTILICTLTTLTIIVTGVWNSGL TGAALTTEAFNVGMPGPGGFLIGIGIIFFAFSTALGWCFYGEKCVEYLLGNKAVKPYK ILYLLCILIGANSKLNLIWAISDVANAMMIIPNLIALLGLSGIIIKISRKYFDPSLDE DINLVK" misc_feature complement(76173..77435) /locus_tag="Acear_0073" /note="Sodium:alanine symporter family; Region: Na_Ala_symp; cl00548" /db_xref="CDD:163871" gene 77886..78101 /locus_tag="Acear_0074" /db_xref="GeneID:9512061" CDS 77886..78101 /locus_tag="Acear_0074" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826690.1" /db_xref="GI:302390870" /db_xref="GeneID:9512061" /translation="MIGVLVVIAVVVLVNILLTASYIYLFIDYFNLFKEDTRSFIINY NRSFEQESVDDQNLNHCEQEYIETFAD" gene 78222..79505 /locus_tag="Acear_0075" /db_xref="GeneID:9512062" CDS 78222..79505 /locus_tag="Acear_0075" /note="KEGG: sth:STH2583 hypothetical protein; SPTR: Q67L78 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826691.1" /db_xref="GI:302390871" /db_xref="GeneID:9512062" /translation="MVDLTGIELVEVPVLVEEGNAQEMLVTEFELVESAKQVKSVDSV IKNLNCEIIEDRVIVEGKIHKQILYIAEEDLVRYQKEEFEFSTLLSLPGVKPRMDVRI NAVIKGDNTELLEEGSLIKQKTLLDIHVLVEKRERLFVELGSKELVVVDRIVGENNNQ TIIEGLLELEIPAFKIMDIEVQLEDISIKIFTDKVIVEGNIKEEIYFIDQKRVECYCK KKLSFIQFIDLVGVKPGMNINLDSEIRDIQYRLSGDGVELSQRVMINSIAKATDRIEA NLKVDSEGKEVRLSKLINKTEEQILEEFLISLDTPAVKIKNVDIEMADIESELMTDRV ILTGRLKQNICFIGENNIERHQQKITSIDLFLDLPGVSPIDTAVDVESEIMFVKSDLA SAGERLKEKAVLKFSIKAFQDPPVTEEIAVVSVED" misc_feature 78318..78569 /locus_tag="Acear_0075" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" misc_feature 78744..78974 /locus_tag="Acear_0075" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" gene 79552..80349 /locus_tag="Acear_0076" /db_xref="GeneID:9512063" CDS 79552..80349 /locus_tag="Acear_0076" /note="InterPro IPR009430; KEGG: pth:PTH_0428 hypothetical protein; PFAM: Gas vesicle synthesis GvpLGvpF; SPTR: A5D582 Putative uncharacterized protein; PFAM: Gas vesicle synthesis protein GvpL/GvpF" /codon_start=1 /transl_table=11 /product="Gas vesicle synthesis GvpLGvpF" /protein_id="YP_003826692.1" /db_xref="GI:302390872" /db_xref="GeneID:9512063" /translation="MEKGFYLYCVLNSTEELDINILGIDNKHEPYIISCQEVGILVSE VMLSEFGQQELAEKVQDLAWLQRKAKRHEQVIEEVMSKTSVIPLTFGVIFKKEIRLKE AISQSLPEIKETFEVINGCEEWGLKLYCDFLQLRDSMSKISPEVKEIESRLEKSQGAS MEFLEQRLEQELDNKVKKEAFRIADEIYEELSTIAVQDQLNKIEDLEIDGFSKPMLLN SVYLIGKDRSSDLLIKLKELEVNYSDLGFYFYYSGPWPPYNFSYLEL" misc_feature 79552..80331 /locus_tag="Acear_0076" /note="Gas vesicle synthesis protein GvpL/GvpF; Region: GvpL_GvpF; pfam06386" /db_xref="CDD:148160" gene complement(80401..80814) /locus_tag="Acear_0077" /db_xref="GeneID:9512064" CDS complement(80401..80814) /locus_tag="Acear_0077" /note="KEGG: hor:Hore_21420 hypothetical protein; SPTR: B8D0F1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826693.1" /db_xref="GI:302390873" /db_xref="GeneID:9512064" /translation="MSFSYPDEIFPYPAVEYIPIDLYDAELIKNHELLNKDSAVKIHI FSNLTEAEEITAAYQLPKLTDNLAEDELLIIILRGQVDEIKYRNYKVTMIGSKDNRLI HIFKIKTNYFYKEKLLFLLYNPDAVKLATERFNLN" gene 80994..82598 /locus_tag="Acear_0078" /db_xref="GeneID:9512065" CDS 80994..82598 /locus_tag="Acear_0078" /note="InterPro IPR018392:IPR002482; KEGG: hor:Hore_21410 peptidoglycan-binding LysM; PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; SPTR: B8D0F0 peptidoglycan-binding LysM; PFAM: LysM domain" /codon_start=1 /transl_table=11 /product="peptidoglycan-binding lysin domain protein" /protein_id="YP_003826694.1" /db_xref="GI:302390874" /db_xref="GeneID:9512065" /translation="MAVQCRDRTVRVEYVVDEDTVRESVSGELTVPDEKPDIERVLEV TTEISTETATVEEGGVDLDIELEVGVLYVADVPEDDPQQPVHFFEGPVSVSNFVELPN AEPGMHVITDVQIIRTSSDFIDERTIEVTATLRKFAKVVEFRQMTIVTDITGLEHGLI DKELLRLNDVIDENVITEVVAGEIDVPEEKPPIERILRVQGDLIGEPETTVVDGAVIV EGTIEGGVVYVAATDEGDQPVHFFEGTFTFSYAVDVPEVSEADDLSVFTDVTVRQITA SFVDDGTTGFDIVLEIFTKVTEPIQIEAVVDVDSDKIEVEKELLRVEEVIGENTITET ITGNVNVPAGKPDVERILAGTNATVLNPTATVQDGGVLIDGEIEGAVIYVADVPEDEL QQPVHFVENFFNFSNFVDVSGAEEGMTAYANVSVVNVRYSLLNQRTVELTTTLQKFAK VVQFRQLEIVTDCIAVSPIVDEPCEDRPSYVVYVVQPGDTLYKIARRYGTTIDAIVEA NDIPDPDRIDVGQKLCIPKKIIDPKG" misc_feature 81099..81371 /locus_tag="Acear_0078" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" misc_feature 81564..81836 /locus_tag="Acear_0078" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" misc_feature 82029..82304 /locus_tag="Acear_0078" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" misc_feature 82434..82571 /locus_tag="Acear_0078" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature order(82440..82442,82449..82451,82458..82460,82473..82475, 82482..82484) /locus_tag="Acear_0078" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" gene complement(82649..84322) /locus_tag="Acear_0079" /db_xref="GeneID:9512066" CDS complement(82649..84322) /locus_tag="Acear_0079" /note="COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily; InterPro IPR001587:IPR011108:IPR004613; KEGG: dae:Dtox_3163 beta-lactamase domain protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: A1HSD3 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="RNA-metabolising metallo-beta-lactamase" /protein_id="YP_003826695.1" /db_xref="GI:302390875" /db_xref="GeneID:9512066" /translation="MTENLDRIGIIQLGGKGVVGSNMIAVEYQNEILVLDAGIMFPTD NMPGVDYVIPDITYLQENKQQVKALLLSHGHEDHIGAVPFLISEINIPIYGTELTIAL VKEKLKENKLLHKTELNQVQPREKTKINNFQIQFINVSHSIPDAAAISITTPVGQILY TGDFKIDQNPINDDLTDFYKLAHLGEEGLLALLSDSTNAEQKGYSRSESSIGKSLQDQ FRTAQGKIIAAAFSSHIHRLQQVVSIAKEYDRKVAISGRSMIKTVKIARKLGHLDLPA EMLIDINDIDKYNPEQVVILMTGSQGEPMAALTRIARGDHRQIEVTPQDTVIISATPI PGNEVAVSNTINQLLETGADVIYYSHDHIHVSGHGFQEELKLMLNLTKPQYFIPVHGE YRHLHHHALLAQEIGIPKENIFVTPNGIKLELTKDEAKITDKVPTGKILIDGSQTGSL DNTVLEDRQSLSEDGIITVMVTIDRETDRIIGGPDLTSRGVTYQQNSQTETLLNKAKS KVAKILDRADIENIDQNSKLKSRIKAGINSLLRKHLNSNPVILPLIMEV" misc_feature complement(82658..84307) /locus_tag="Acear_0079" /note="mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]; Region: COG0595" /db_xref="CDD:30940" misc_feature complement(<83822..84274) /locus_tag="Acear_0079" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" misc_feature complement(83141..>83242) /locus_tag="Acear_0079" /note="RNA-metabolising metallo-beta-lactamase; Region: RMMBL; pfam07521" /db_xref="CDD:191768" gene complement(84488..85003) /locus_tag="Acear_0080" /db_xref="GeneID:9512067" CDS complement(84488..85003) /locus_tag="Acear_0080" /note="COGs: COG1376 conserved hypothetical protein; InterPro IPR005490:IPR018392:IPR002482; KEGG: hor:Hore_21380 ErfK/YbiS/YcfS/YnhG family protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; SPTR: B8D0E7 ErfK/YbiS/YcfS/YnhG family protein; PFAM: LysM domain; L,D-transpeptidase catalytic domain" /codon_start=1 /transl_table=11 /product="ErfK/YbiS/YcfS/YnhG family protein" /protein_id="YP_003826696.1" /db_xref="GI:302390876" /db_xref="GeneID:9512067" /translation="MNNINKKIVINLEQRYLELYQNSELLGHYPVAIGKASTPTPTGN FEVLLKRKNPGGALGSRWIQFTWQTHGIHGTNQPWLIGQAVSNGCVRMYNTDVKDIYK QVEVGTPIHIYNNLNSNPNPDYTIYKVQPGDTLYKIAQKFNTSVAELVKINQLKNPDL IHPGQKLKITQ" misc_feature complement(84668..84982) /locus_tag="Acear_0080" /note="L,D-transpeptidase catalytic domain; Region: YkuD; pfam03734" /db_xref="CDD:190732" misc_feature complement(84494..84631) /locus_tag="Acear_0080" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(84581..84583,84590..84592,84605..84607, 84614..84616,84623..84625)) /locus_tag="Acear_0080" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" gene 85568..86455 /locus_tag="Acear_0081" /db_xref="GeneID:9512068" CDS 85568..86455 /locus_tag="Acear_0081" /note="COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; InterProIPR002052:IPR006204:IPR013750:IPR014721:IPR 020568:IPR004424; KEGG: bcl:ABC0074 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; SPTR: C6J5F6 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase" /codon_start=1 /transl_table=11 /product="4-diphosphocytidyl-2C-methyl-D-erythritolkinase" /protein_id="YP_003826697.1" /db_xref="GI:302390877" /db_xref="GeneID:9512068" /translation="MKSKLQVTAQAKINLLLDVIGRRDDGYHKVEMVMQSIDLADRLE FTRLQKGIEIKVDHPEVPSGEENLVYQAVELLFDRYGLEGGLQVKINKEIPVAAGLAG GSTDAAAALVAVNKLWELGLSVEELQNLGAKLGADVPFCIKGGTLLATGIGTELKPLT PVQKLDLVLVNPPFSVSTAKVYQNFNLDTVKAHTNLDRMLAALKAKERSEVIAAADNL LAEVTMELYSELFELEKMLLNLGASKVLMSGSGPTMLGFVDNQSEAEKLAKQLRLQLL ENYIIKPVQTACQGIAIKN" misc_feature 85577..86383 /locus_tag="Acear_0081" /note="4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional; Region: ipk; PRK00128" /db_xref="CDD:178884" misc_feature 85829..86002 /locus_tag="Acear_0081" /note="GHMP kinases N terminal domain; Region: GHMP_kinases_N; cl08256" /db_xref="CDD:195670" misc_feature 86162..86383 /locus_tag="Acear_0081" /note="GHMP kinases C terminal; Region: GHMP_kinases_C; pfam08544" /db_xref="CDD:192062" gene 86473..87246 /locus_tag="Acear_0082" /db_xref="GeneID:9512069" CDS 86473..87246 /locus_tag="Acear_0082" /note="KEGG: hor:Hore_21350 hypothetical protein; SPTR: B8D0E4 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0007" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826698.1" /db_xref="GI:302390878" /db_xref="GeneID:9512069" /translation="MEYNAVLLAGAESGDLMPEKSRIDYEAFIEINGKAMISYVLEAL NNAEKVNQIIVVGPKSKEEFLTVKGADLIVDAKDSIVENIRLGLQILNKEFNSSQLVL LTTSDIPLVTSEAIDSFITDCEQEGEYSGYYPVIPEEVKQTAYPVAESTSVSLQNDIY TGGNLALVRPKLIISSIPLLKRIIDYRKNPLKMSWILGLKFASKLLFGRLSLGEIEAK VSELAGASCSAVVTDYPELGLDVDNSQDLKLIRDLISKE" misc_feature 86485..>86832 /locus_tag="Acear_0082" /note="Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Region: Glyco_tranf_GTA_type; cl11394" /db_xref="CDD:197438" gene 87357..88184 /locus_tag="Acear_0083" /db_xref="GeneID:9512070" CDS 87357..88184 /locus_tag="Acear_0083" /note="COGs: COG0503 adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR015265:IPR000836:IPR011991:IPR010078; KEGG: hor:Hore_21340 purine operon repressor, PurR; PFAM: purine repressor ; phosphoribosyltransferase; SPTR: B8D0E3 Purine operon repressor, PurR; TIGRFAM: pur operon repressor; PFAM: phosphoribosyl transferase domain; Bacterial purine repressor, N-terminal; TIGRFAM: pur operon repressor, Bacillus subtilis type; xanthine phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="pur operon repressor" /protein_id="YP_003826699.1" /db_xref="GI:302390879" /db_xref="GeneID:9512070" /translation="MKLRRSERIVAITKILIDKPYRLFSLNHFTQKFDAAKSTISEDL SIIKRVLAAEDMGQIETISGAAGGVRFIPKKTAGDIEEVVTDLCQDLSDSDRILPGGF LYITDLIFSPETVMEIGKIFATQFAELDADYVITIETKGIPIALATARAMNLPVISIR KDNRVTEGSVVSINYVTGSSKKIETMSLSRRALSEESKVVIVDDFMKAGGTAKGMLDL LSEFKAEVLDIGVLMETAQPEKKLVSNYTSLIVVDKVDEEKQQVVVRPSNSILGKSD" misc_feature 87357..88160 /locus_tag="Acear_0083" /note="pur operon repressor; Provisional; Region: PRK09213" /db_xref="CDD:181702" misc_feature 87366..87575 /locus_tag="Acear_0083" /note="Bacterial purine repressor, N-terminal; Region: PuR_N; pfam09182" /db_xref="CDD:150015" misc_feature 87594..88127 /locus_tag="Acear_0083" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene complement(88181..89272) /locus_tag="Acear_0084" /db_xref="GeneID:9512071" CDS complement(88181..89272) /locus_tag="Acear_0084" /note="KEGG: hor:Hore_21310 hypothetical protein; SPTR: B8D024 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826700.1" /db_xref="GI:302390880" /db_xref="GeneID:9512071" /translation="MNEGSIINFFPGGNTAQGFYSFYDYLPYEAEQVFIIKGGPGTGK STFMKKIGERMIEEGYDIEFHWCSSDNNSLDGIVIKDLQVAFLDGTAPHLVDPENPGA VDEIINLGRYWDRKLLKEHKSEIKQLNNQIWNLFQLAYDDLAIAKSFYEKWKSNYIEA LDPQKIEYKIKNLKAEIFNSTEIADKKGEERRLFASALTPQGPVNYLNNITKDIEKRY ILKGKPGSGKAKLTEKIAKEALMQGYEVYFYHCAFDPEKIDTVIIPELNTALINGTPP HELNPNRKNDEVINMLDCIDQQIIDEFESNCLEAKENYEELISKAITKIAEAKSLHDD LEEYYIEAMNFTAIDNLRKEIITELLPTT" misc_feature complement(88193..89263) /locus_tag="Acear_0084" /note="hypothetical protein; Provisional; Region: PRK06851" /db_xref="CDD:180730" misc_feature complement(<88985..89173) /locus_tag="Acear_0084" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" gene 89562..89963 /locus_tag="Acear_0085" /db_xref="GeneID:9512072" CDS 89562..89963 /locus_tag="Acear_0085" /note="COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: hor:Hore_21300 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: B8D023 Putative transcriptional regulator, MerR family; PFAM: MerR family regulatory protein" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="YP_003826701.1" /db_xref="GI:302390881" /db_xref="GeneID:9512072" /translation="MADIDPDTPVYSIGVVKEMTGLTRRQIRYYEEEDLVKPARTDGN QRIYSENDIERLKEIKELLANGLNIAGIQKQLGKVSELEKEKQKKQQKKDIEFADKLS KVSTKKLSSLYPVSNRADLAKLLNEEENGIE" misc_feature 89589..>89789 /locus_tag="Acear_0085" /note="Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators; Region: HTH_GlnR-like; cd01105" /db_xref="CDD:133380" misc_feature order(89595..89603,89643..89645,89694..89699) /locus_tag="Acear_0085" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133380" gene 90038..91621 /locus_tag="Acear_0086" /db_xref="GeneID:9512073" CDS 90038..91621 /locus_tag="Acear_0086" /EC_number="3.5.1.81" /note="COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR006680:IPR012855:IPR011059; KEGG: nth:Nther_2753 amidohydrolase 3; PFAM: amidohydrolase; D-aminoacylase domain protein; PRIAM: N-acyl-D-amino-acid deacylase; SPTR: B2A2T5 amidohydrolase; PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family" /codon_start=1 /transl_table=11 /product="N-acyl-D-amino-acid deacylase" /protein_id="YP_003826702.1" /db_xref="GI:302390882" /db_xref="GeneID:9512073" /translation="MKLDLKLSGGTVVDGTGRDRFRTDIGIKDGEIVKLGDLKELNAC IEYNIEGLIIAPGFIDIHSHSKYSILANPKASGKVYQGVTTEVVGNCGSSAAPVTDRS TEAVQDSLDKYNLELEWQSFAGYFGVLEKKGTALNIASLVGHGLLRKSVMGDEPRRPT NDELIEMKQLLASALEDGAWGLSTGLIYPPSSYAATEELMELAQVAAEYNGIYSTHLR SEGDELIKAVKEAIKIGRETGVSVEISHHKAIGKNNWGKVDKTLELITKARDEGFNIS CDMYPYLATSTGLAALLPAKIKEGGKEKVLRRLQNKKSVAEIKQYWQQKQQPKDYWSK ILISEVSSDDNQHLEGKSITQIAERRNQKPADIVIKLLIEEELQISMVKFSISEADLK KVLEFPETMISSDSLTRVKDGLLDQGKPHPRAYGSFPRVIDKFVKDKELLTLEEAVKK MSYLPAQKLGLNNRGEIAVGKKADLAVFDLTEFTDQATYKQPHRYAAGLKYLIINGQP VVEDAEQTSALPGRVLINL" misc_feature 90047..91609 /locus_tag="Acear_0086" /note="N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]; Region: COG3653" /db_xref="CDD:33451" misc_feature 90047..>90895 /locus_tag="Acear_0086" /note="D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics; Region: D-aminoacylase; cd01297" /db_xref="CDD:73255" misc_feature order(90221..90223,90227..90229,90308..90310,90683..90685, 90773..90775) /locus_tag="Acear_0086" /note="active site" /db_xref="CDD:73255" misc_feature order(90779..90781,90875..90877,90893..90895) /locus_tag="Acear_0086" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:73255" misc_feature <91091..91603 /locus_tag="Acear_0086" /note="Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have...; Region: metallo-dependent_hydrolases; cl00281" /db_xref="CDD:193747" gene 91733..93091 /locus_tag="Acear_0087" /db_xref="GeneID:9512074" CDS 91733..93091 /locus_tag="Acear_0087" /EC_number="2.7.7.23" /EC_number="2.3.1.157" /note="COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR005835:IPR001451:IPR011004:IPR005882; KEGG: hor:Hore_21240 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; SPTR: B8D017 UDP-N-acetylglucosamine pyrophosphorylase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase" /codon_start=1 /transl_table=11 /product="glucosamine-1-phosphate N-acetyltransferase ;UDP-N-acetylglucosamine pyrophosphorylase" /protein_id="YP_003826703.1" /db_xref="GI:302390883" /db_xref="GeneID:9512074" /translation="MAELATIVLAAGKGTRMKSKLPKVLHKIGGKSMVEHIISTADTL NPVLNIAIIGYKSELVKSNLEDSNVKFAYQNQQLGTGHAVMQAEDLLADFTGSVLVLC GDTPLLTADTLNRLFQQQQREGIAAAVLTTEVEDPAGYGRIIREQTGDVAQIVEDKDA TAEEKKIKEINTGTYCFDSQLLFSALDKIDNDNAQGEYYLTDIIEVFKEENNRVAAVV TDDKSEILGVNTRRHLVQAGKILQKRICNQHLDEGVTIIDPENTFIDQEVEIGRDVII HPFTTIEGETEIGDGTVIGSQSRIIDSKLGSEVTVEHSVIREAEIGDSTKVGPFAYLR PGTEIGKEGKAGSFVEIKESKVGNQSKVPHLSYIGDTMIAEEVNVGAGTITANYDGEE KHKTEIQSQAFIGSNSTLVAPVEIGQGAVTGAGSVVTRDVADNTLVLGVPAKEKNSEG EN" misc_feature 91739..93082 /locus_tag="Acear_0087" /note="bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional; Region: glmU; PRK14354" /db_xref="CDD:184643" misc_feature 91751..92425 /locus_tag="Acear_0087" /note="N-terminal domain of bacterial GlmU; Region: GT2_GlmU_N_bac; cd02540" /db_xref="CDD:133020" misc_feature order(91757..91765,91886..91888,91970..91972,91979..91981, 92036..92038,92042..92044) /locus_tag="Acear_0087" /note="Substrate binding site [chemical binding]; other site" /db_xref="CDD:133020" misc_feature order(92042..92044,92417..92419) /locus_tag="Acear_0087" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:133020" misc_feature 92489..93052 /locus_tag="Acear_0087" /note="N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase. It is a bifunctional bacterial enzyme that catalyzes two...; Region: LbH_GlmU_C; cd03353" /db_xref="CDD:100044" misc_feature order(92732..92734,92780..92782,92786..92788,92822..92824, 92831..92833,92864..92875,92888..92896,92909..92911, 92939..92941,92945..92950,92999..93004) /locus_tag="Acear_0087" /note="active site" /db_xref="CDD:100044" misc_feature order(92732..92734,92780..92782,92786..92788,92822..92824, 92831..92833,92864..92872,92891..92893,92909..92911) /locus_tag="Acear_0087" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100044" misc_feature order(92873..92875,92888..92890,92894..92896,92945..92950, 92999..93004) /locus_tag="Acear_0087" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:100044" gene 93142..94089 /locus_tag="Acear_0088" /db_xref="GeneID:9512075" CDS 93142..94089 /locus_tag="Acear_0088" /EC_number="2.7.6.1" /note="COGs: COG0462 phosphoribosylpyrophosphate synthetase; InterPro IPR000842:IPR000836:IPR005946; KEGG: hor:Hore_21230 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: B8D016 Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase" /codon_start=1 /transl_table=11 /product="ribose-phosphate pyrophosphokinase" /protein_id="YP_003826704.1" /db_xref="GI:302390884" /db_xref="GeneID:9512075" /translation="MTSYKEKLTVVTGNSNPKLAEEICDYLGTSLIDAEVFRFSDGEI SVTIRESVRGSDVFVVQPTCPPVNENIMELLIMIDALKRASARSVTAVVPYFGYARQD RKAKPRDPISAKLISNLLTSSGADRLVSIDLHAAQIQGFFNIPVDHLLGAPILAEYFL NKGLDDTIVVAPDVGSVKRCRDFAERLDTSIAIIDKRRPEPNVSEVMNIIGDVSDKNV ILLDDMIDTAGTITEAGRVLKNKGAKKVYACCTHPIFSGPAIDRLKESVLEEVVVTNT IPLSEEKKLDKVKVLSIAPLVGEALDRIFKDLSVSVLFD" misc_feature 93151..94086 /locus_tag="Acear_0088" /note="Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]; Region: PrsA; COG0462" /db_xref="CDD:30810" misc_feature 93169..94086 /locus_tag="Acear_0088" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene 94164..94838 /locus_tag="Acear_0089" /db_xref="GeneID:9512076" CDS 94164..94838 /locus_tag="Acear_0089" /note="COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); InterProIPR020055:IPR020056:IPR020057:IPR011035:IPR 001021; KEGG: hor:Hore_21220 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like; SPTR: B8D015 50S ribosomal protein L25; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form" /codon_start=1 /transl_table=11 /product="ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5" /protein_id="YP_003826705.1" /db_xref="GI:302390885" /db_xref="GeneID:9512076" /translation="MERVQLDVELRDETGTGSARRLREQGLVPGVVYGRNQEPINLKL DATELADVTGGNAIIDLQVDGEEKTVMVKDVQKDVITDEYLHVDFHQIALDEPIVVEV PISLEGVAEGVKEGGVLQKTLRKVEVQCLPTEIPSDLKLNISELEVGESLHVGDLEAG EGIELTTSGDEVVVTVVAPTELDLDEDEDELEEDLVTEPEVIGEEPDEEGEEVEGEAE AETEEA" misc_feature 94173..94436 /locus_tag="Acear_0089" /note="Ribosomal_L25_TL5_CTC: Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain. L25 is a single-domain protein, homologous to the N-terminal domain of TL5 and CTC, which each contain two domains. CTC is a known stress protein, and proteins of this...; Region: Ribosomal_L25_TL5_CTC; cd00495" /db_xref="CDD:88604" misc_feature order(94194..94196,94218..94226,94230..94232,94260..94268, 94278..94280,94380..94385,94389..94391,94419..94421, 94425..94427,94431..94433) /locus_tag="Acear_0089" /note="5S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88604" misc_feature order(94266..94268,94332..94334,94368..94370,94380..94382, 94431..94436) /locus_tag="Acear_0089" /note="CTC domain interface; other site" /db_xref="CDD:88604" misc_feature order(94374..94379,94386..94388,94398..94400,94404..94409, 94431..94433) /locus_tag="Acear_0089" /note="L16 interface [polypeptide binding]; other site" /db_xref="CDD:88604" gene 94924..95481 /locus_tag="Acear_0090" /db_xref="GeneID:9512077" CDS 94924..95481 /locus_tag="Acear_0090" /EC_number="3.1.1.29" /note="COGs: COG0193 peptidyl-tRNA hydrolase; InterPro IPR018171:IPR001328; KEGG: hor:Hore_21210 aminoacyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: B8D014 peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase" /codon_start=1 /transl_table=11 /product="peptidyl-tRNA hydrolase" /protein_id="YP_003826706.1" /db_xref="GI:302390886" /db_xref="GeneID:9512077" /translation="MKLVVGLGNPGFKYAATRHNIGFRVIDNFADKKQIKIEKEEQEA LTGSLYFKGEKVILAKPQTYMNNSGRAVGKLVNWYDIAPENVIIIYDDLDLNTGHLRI KSSGGHGGHNGVKSVFNHLGSTDISRIKIGIGRPPEYMTVPDYVLGKFDKEERDKAAR AVREAVEAIGVILDQGIEQAMNKYN" misc_feature 94930..95394 /locus_tag="Acear_0090" /note="Peptidyl-tRNA hydrolase (PTH) is a monomeric protein that cleaves the ester bond linking the nascent peptide and tRNA when peptidyl-tRNA is released prematurely from the ribosome. This ensures the recycling of peptidyl-tRNAs into tRNAs produced through...; Region: PTH; cd00462" /db_xref="CDD:73208" misc_feature order(94948..94950,94978..94980,95113..95118,95194..95196, 95254..95256) /locus_tag="Acear_0090" /note="putative active site [active]" /db_xref="CDD:73208" misc_feature 94978..94980 /locus_tag="Acear_0090" /note="catalytic residue [active]" /db_xref="CDD:73208" gene 95565..95792 /locus_tag="Acear_0091" /db_xref="GeneID:9512078" CDS 95565..95792 /locus_tag="Acear_0091" /note="KEGG: pjd:Pjdr2_0038 hypothetical protein; PFAM: protein of unknown function (DUF2757)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826707.1" /db_xref="GI:302390887" /db_xref="GeneID:9512078" /translation="MKLVYYCSQCNDVIDRLEVDAEEITEDKLGFSILTPGEKEDIIN ETEDEIEIGIICDDCEAEDDLISLVNNNLIH" gene 95865..99392 /locus_tag="Acear_0092" /db_xref="GeneID:9512079" CDS 95865..99392 /locus_tag="Acear_0092" /note="COGs: COG1197 transcription-repair coupling factor (superfamily II helicase); InterProIPR003711:IPR011545:IPR001650:IPR005118:IPR 014001:IPR014021:IPR004576; KEGG: hor:Hore_21200 transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: B8D013 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd)" /codon_start=1 /transl_table=11 /product="transcription-repair coupling factor" /protein_id="YP_003826708.1" /db_xref="GI:302390888" /db_xref="GeneID:9512079" /translation="MEAGLSDLLAKTEKIGNLKKNLTENLNTQLEVNLSVSQRAFIAA NIYEQVSDKFLLLTYNWQRAAELYEELLRLLATEEIFLFPQLEVLPHESIEVDISVKV QRLTALEKLTTRDESIIIAPIQALLMKLPPADIFADYSFRIDFDSTVELKKISSQLIN QGYCRVDMVENKGDFSIRGGIIDIYPLTRSNPVRIELFGDEVESIREFDLATQRSIKE LNDVHIPPATEILLDSDSLQQGIAKLNKELKQNREVLIEDGKNKEAKELERKLETDLE QIEEGIQFPAIRQYLPAFYSGLSTLIDYFNEGSLVFDSPNRIQKRAVDLMDDHNGLRL SLLNQGSVLSSYAKNFASFEELLTETYDYSKLYLNKTQEIKSLRVDRKLEFNLKETPV FRGQINHFLDELKQLIEQQYRVIITLSTESKCKRLINSLQEEDLTAFYTEEITDKLQS GNIAVTTDALQKGFSLPDLKFILFTETDIFGQSQRKKKRKTKTYDQGAKISSFEELNV GDYVVHENHGIGKYLGVKTLEVQGHNQDYLLIKYADEDKLYVPTDQVNLIQKYVGKEG NKPKLYSLGSNDWARVKQRVKESVQEMAEELLDIYAEREVKDGYAFSEDTVWQQEFES DFPYEETPDQLKTIEEVKEDMESPQPMDRLLCGDVGYGKTEVAIRAAFKAVLDGKQVA MLVPTTILAQQHLNTFIDRFEDYPVKVGMLSRFKTAKEQKKIIEDLKQGIIDIIIGTH RILSTDIEFNDLGFLIVDEEQRFGVKHKERLKQIKKSIDVLTLTATPIPRTLHMSLVG VRDMSLIETPPQNRYPIRTYVREYSDDLIREAIRKEIDRGGQVYFVHNRVKNIDKVAA KIKKLLPKAEVVTAHGQMSEAKLEKIMLGFLDGEHDVLVCTTIIETGLDIPNVNTILI NNADQLGLAQLYQLRGRVGRTNRVAYAYLLYQQDQVLSEVAEKRLQAIKEFTNLGSGF KIAMRDLEIRGAGNILGPKQHGHIEAIGFSLYCKLLEQAVNELKGEDDEEEAAEINID LELDAYIPEDYIPDSKQKIEIYKKISGIMNLTEVEEVKAELRDRFGAIPQSVLNLVMI SKIKVLALNLDVKSIESKDGLIMVNFNTADYLSGPQILKLSDQYSQQIGFKSAKEPVL KLETEESDVKILEILAEVLDYLIASQDLK" misc_feature 95973..99368 /locus_tag="Acear_0092" /note="Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]; Region: Mfd; COG1197" /db_xref="CDD:31390" misc_feature 97377..97670 /locus_tag="Acear_0092" /note="CarD-like/TRCF domain; Region: CarD_TRCF; cl00588" /db_xref="CDD:193879" misc_feature 97815..98225 /locus_tag="Acear_0092" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 97842..97856 /locus_tag="Acear_0092" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 98136..98147 /locus_tag="Acear_0092" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature 98304..98696 /locus_tag="Acear_0092" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(98400..98411,98475..98480,98553..98561) /locus_tag="Acear_0092" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(98577..98579,98643..98645,98655..98657,98664..98666) /locus_tag="Acear_0092" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature 98964..99254 /locus_tag="Acear_0092" /note="TRCF domain; Region: TRCF; pfam03461" /db_xref="CDD:190644" gene 99589..100149 /locus_tag="Acear_0093" /db_xref="GeneID:9512080" CDS 99589..100149 /locus_tag="Acear_0093" /note="InterPro IPR007159:IPR014213:IPR006339; KEGG: hmo:HM1_0719 stage V sporulation protein T, AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; SPTR: B0TBA9 Stage v sporulation protein t, abrb family transcriptional regulator; TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T" /codon_start=1 /transl_table=11 /product="AbrB family transcriptional regulator" /protein_id="YP_003826709.1" /db_xref="GI:302390889" /db_xref="GeneID:9512080" /translation="MKATGIVRRIDDLGRVVIPKEIRRTMRIREGEPLEIFVDRDGEV ILKKYSPLGQLNEFAEEYVDSLHEVTGYIACVLDRDVVVAVAGAPDKKFLDKPVSQAA EEVMDKQETVIIEDPGAHSFCEGCLEDDEDCKFSVQVLAPVISLEGKSIGAVVLSSQE LDDTMGDLEVKLANTAAGFLARQMED" misc_feature 99589..>99801 /locus_tag="Acear_0093" /note="SpoVT / AbrB like domain; Region: SpoVT_AbrB; cl00877" /db_xref="CDD:186236" misc_feature 99592..100143 /locus_tag="Acear_0093" /note="stage V sporulation protein T; Region: spore_V_T; TIGR02851" /db_xref="CDD:131898" gene 100281..101888 /locus_tag="Acear_0094" /db_xref="GeneID:9512081" CDS 100281..101888 /locus_tag="Acear_0094" /note="COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797:IPR014249; KEGG: hor:Hore_21180 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: B8D011 polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B" /codon_start=1 /transl_table=11 /product="stage V sporulation protein B" /protein_id="YP_003826710.1" /db_xref="GI:302390890" /db_xref="GeneID:9512081" /translation="MAENRKQGFLQGALILTIAAFISKAMGLVYRILLTRLIGKEGIG LYQMAYPIYTIILVISRSGIPVAISKLVAEKVAEDNRKSAYRIFRVALSISFILGLVF SAGLIIAAKPLAQNVLRDARAFYSVLAIAPAVFFVSIMASYRGFFQGLQTMTPTAISQ VVEQLVRMSTMLLLAYLLLSKGVEFAAGGAAFGAVTGAVAGLTVLLYIYYKNKQEVDE FAVSGPGDNLPVHRILQRLASLAIPVTLGALVLPLMQFIDATLIPWRLQVAGFSISEA TGLYGNFAGMAMVLVNFPTIITVSLAASLVPTISEAFSLGEDRLIKIRTQSALRLTVF ICLPAAAGLFLLATPLSQMLFAQPEAGIPLRYVSWGVIFVCLQQTSSSILQGIGKTVI PARNLFLGGALNAVLNYFLTAIPSIGIRGAAVATASGFCLAALLNLLSIALLIGYDYN YRDMLLKPILAVVVMSLLVKLSYSQGITLLQNNTLSTLGAVVVGAVVYSLILLITGAV KEKDLKLIPKIGDRLADILLKLGLVRG" misc_feature 100305..101783 /locus_tag="Acear_0094" /note="stage V sporulation protein B; Region: spore_V_B; TIGR02900" /db_xref="CDD:163065" misc_feature 100305..>100781 /locus_tag="Acear_0094" /note="Polysaccharide biosynthesis protein; Region: Polysacc_synt; cl10513" /db_xref="CDD:187004" misc_feature 101133..101507 /locus_tag="Acear_0094" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" gene 101890..103386 /locus_tag="Acear_0095" /db_xref="GeneID:9512082" CDS 101890..103386 /locus_tag="Acear_0095" /note="COGs: COG3956 protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR004518:IPR000878:IPR011551; KEGG: cpf:CPF_2803 MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: C6Q4B5 MazG family protein; TIGRFAM: MazG family protein; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein" /codon_start=1 /transl_table=11 /product="MazG family protein" /protein_id="YP_003826711.1" /db_xref="GI:302390891" /db_xref="GeneID:9512082" /translation="MPEPELKGLKIIGLGYKGVDDLTLKAYKELKKVDKLLVRTDKHP VIPHFKEEGIDVISFDNLLEKDLDSDQIVNSIAEQIRGYLDKNIEVDYAVPGSPLVGD ESVNRLVAKLPDDRIEVLPGLDSFGLLKRKFNFDSNGLQIMDSLAFRVEDIDTDQSLV LTNISNQKAASRLQEGLLEVYPADYSIQIIEVGKDYLTESRKLLLRNLDKLKEVDQLI NLYIPALSEKTEVDLDRLGSLDTLVKVVAKLRSPEGCPWDLEQTHYSLRPHLIEETYE VLESIELNDSAGLCEELGDLLLHVVFHAQLAEETGDFTIEDVISSISEKMIRRHPHVF GTKELSTSDEVIKKWEEIKATEKNHKENESLLDITRGLPALMGAQEIQSKAAEIGFDW TDIDGAVDKLKEELEEFQEALMFEQKDLVKEELGDLLFAVVNVSRFLDLDSELTLHDA CCKFKARFQYMEKLADDKLSGMSLTELEELWQKAKVKLEEEKINERFE" misc_feature 101953..>102267 /locus_tag="Acear_0095" /note="Tetrapyrrole (Corrin/Porphyrin) Methylases; Region: TP_methylase; cl00304" /db_xref="CDD:197405" misc_feature 102595..103344 /locus_tag="Acear_0095" /note="nucleoside triphosphate pyrophosphohydrolase; Reviewed; Region: mazG; PRK09562" /db_xref="CDD:181956" misc_feature 102670..102891 /locus_tag="Acear_0095" /note="MazG nucleotide pyrophosphohydrolase domain; Region: MazG; cl00345" /db_xref="CDD:193780" misc_feature 103093..>103242 /locus_tag="Acear_0095" /note="MazG nucleotide pyrophosphohydrolase domain; Region: MazG; cl00345" /db_xref="CDD:193780" gene 103370..104530 /locus_tag="Acear_0096" /db_xref="GeneID:9512083" CDS 103370..104530 /locus_tag="Acear_0096" /EC_number="3.4.16.4" /note="COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; InterProIPR001967:IPR012907:IPR012338:IPR015956:IPR 018044; KEGG: hor:Hore_21160 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; PRIAM: serine-type D-Ala-D-Ala carboxypeptidase; SPTR: B8D009 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain" /codon_start=1 /transl_table=11 /product="serine-type D-Ala-D-Ala carboxypeptidase" /protein_id="YP_003826712.1" /db_xref="GI:302390892" /db_xref="GeneID:9512083" /translation="MKDLNKKLTIVIILVLSSLLVVASPVLAAFDIEAESAILMEAET GQVLFTKNVTEELPPASITKIMTLLLAMEAIDSGQMNLDDTVIASEFASSMGGSQIYL APKEKMKVETLLESIAIASANDACVALGEHIAGSYQNFIKMMNERASELGLKDTNFIN STGLPTDDGAHYSSARDIAIMSRELINKHPKVLDWTSIWIDKIRNGEFTLYNTNDLIN YYPGADGLKTGWTDKAGYCLAATAKRDGMRLISVVMKTDSEEARMEESAKLLNYGFSR FDLKKVVKQGEDVGKIEVKEGEELEVKVETAEDLKLVLKSNAEDLEREIELEKEVTAP IEKGEIVGKLIIKQADKELGSVDLAAAENVKRADLLTRLWRMIRDFILGFFK" misc_feature 103457..104524 /locus_tag="Acear_0096" /note="D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]; Region: DacC; COG1686" /db_xref="CDD:31872" misc_feature 103460..>104083 /locus_tag="Acear_0096" /note="Beta-lactamase; Region: Beta-lactamase; cl01009" /db_xref="CDD:194006" misc_feature 104198..104467 /locus_tag="Acear_0096" /note="Penicillin-binding protein 5, C-terminal domain; Region: PBP5_C; pfam07943" /db_xref="CDD:191901" gene 104590..105531 /locus_tag="Acear_0097" /db_xref="GeneID:9512084" CDS 104590..105531 /locus_tag="Acear_0097" /note="COGs: COG2385 sporulation protein and related protein; InterPro IPR013693:IPR013486; KEGG: hor:Hore_21150 SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; SPTR: B8D008 SpoIID/LytB domain protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain" /codon_start=1 /transl_table=11 /product="SpoIID/LytB domain protein" /protein_id="YP_003826713.1" /db_xref="GI:302390893" /db_xref="GeneID:9512084" /translation="MDFLRQLKFNRLLIVSLIIAAMVVGSSCTQQQQQEVEKIDEPTI EVVTENGETKSLNMEEYVAGVVAGEMKPNWSQNAYGAQAIIARTFALKLLKDEGTNQI SGEHEKAQAYRPQNITDEIRQAVEKTRGEVVTHKGEYIKGWFHSSAAGQTTTAKVGLA YDKPEPEYITSVESPDQHAPEDVKSWIVTLPQSAILNVLKEIKGVQASKVENITIDDK DETGRAIGLTINYGNGSETIKAAKFRTSIGPDELKSTLIESIEETDNGFIFKGSGYGH GVGMSQWGAYALAKEGQSPEDIIKHYFTNIEIIKKWN" misc_feature 104617..105519 /locus_tag="Acear_0097" /note="Stage II sporulation protein; Region: SpoIID; cl07201" /db_xref="CDD:164094" misc_feature 104755..105519 /locus_tag="Acear_0097" /note="SpoIID/LytB domain; Region: SpoIID_LytB; TIGR02669" /db_xref="CDD:162968" gene 105631..105885 /locus_tag="Acear_0098" /db_xref="GeneID:9512085" CDS 105631..105885 /locus_tag="Acear_0098" /note="InterPro IPR012504; KEGG: cpr:CPR_2486 sporulation protein YabP; PFAM: YabP family protein; SPTR: C0GIZ7 sporulation protein YabP; TIGRFAM: sporulation protein YabP; PFAM: YabP family; TIGRFAM: sporulation protein YabP" /codon_start=1 /transl_table=11 /product="sporulation protein YabP" /protein_id="YP_003826714.1" /db_xref="GI:302390894" /db_xref="GeneID:9512085" /translation="MSKHQVRMDNRELLEIEGVIEVINFSDEQISLATELGPLLILGE DLNIQQLNLDNGELIVDGYINGLDYSQDDNGDGILSNLFK" misc_feature 105640..105882 /locus_tag="Acear_0098" /note="YabP family; Region: YabP; cl06766" /db_xref="CDD:195376" gene 105917..106336 /locus_tag="Acear_0099" /db_xref="GeneID:9512086" CDS 105917..106336 /locus_tag="Acear_0099" /note="InterPro IPR019074; KEGG: cce:Ccel_3082 hypothetical protein; PFAM: spore cortex biosynthesis protein, YabQ-like; SPTR: C6PF21 spore cortex biosynthesis protein YabQ; PFAM: spore cortex protein YabQ (spore_YabQ); TIGRFAM: spore cortex biosynthesis protein YabQ" /codon_start=1 /transl_table=11 /product="spore cortex biosynthesis protein, YabQ" /protein_id="YP_003826715.1" /db_xref="GI:302390895" /db_xref="GeneID:9512086" /translation="MVSLEMQIKTFIYMVLLGHLLALLFDFYRVLRSFGYINDMATAA IDFIFAFLGAGVTFFILLNSNFGQIRFYIFVGLVLGIIVYHQLFSCLIIRVMRVTLEA IIKLITKIINLSTKLFRPVKDLLIKLKNLIDGFKFYS" misc_feature 105947..106183 /locus_tag="Acear_0099" /note="Spore cortex protein YabQ (Spore_YabQ); Region: Spore_YabQ; cl09801" /db_xref="CDD:158703" gene 106422..106766 /locus_tag="Acear_0100" /db_xref="GeneID:9512087" CDS 106422..106766 /locus_tag="Acear_0100" /note="InterPro IPR007060; KEGG: hor:Hore_00500 septum formation initiator; PFAM: Septum formation initiator; SPTR: B8D057 Septum formation initiator; PFAM: Septum formation initiator" /codon_start=1 /transl_table=11 /product="Septum formation initiator" /protein_id="YP_003826716.1" /db_xref="GI:302390896" /db_xref="GeneID:9512087" /translation="MPNRKIINFIKQLITSKKIMVVILIILITAVYSFFRVSTRVKNM KQRLNSLKAEAENLDKEVKVLDKRLQHVNSKEFIEEVARKELGLVKPGEALYIVVEEE TGGQENESSKNQ" misc_feature <106542..106724 /locus_tag="Acear_0100" /note="Septum formation initiator; Region: DivIC; cl11433" /db_xref="CDD:187037" gene 106744..108900 /locus_tag="Acear_0101" /db_xref="GeneID:9512088" CDS 106744..108900 /locus_tag="Acear_0101" /note="COGs: COG2183 transcriptional accessory protein; InterProIPR018974:IPR003029:IPR012340:IPR016027:IPR 006641; KEGG: hor:Hore_00510 RNA binding S1 domain protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; SPTR: B8D058 RNA binding S1 domain protein; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region" /codon_start=1 /transl_table=11 /product="Tex-like protein" /protein_id="YP_003826717.1" /db_xref="GI:302390897" /db_xref="GeneID:9512088" /translation="MNQARINEKLAAELNLAVKQVRNTVELLDEGNTIPFIARYRKEA TGSLDETELRELDEKLEYLRNLAERKEKVIELIDDQDKLTAELEEKISQASKLQTVED LYRPYRQKRKTRAAKAKDKGLEPLAELFLAQKLESGSIKELAEDYLNPEEELTEIEDV LQGTRDIIAEYVADKPEVRQVARRMTFDKGSITSEVKEDEDDNYRDYHEYQEEVEEVD PYQTLALNRGEDEEALQVKVEAPDEDIIRKIKEMIIENQATIFLEEIEEAIEDGYQRL VAPAIGREVRNKLTDEAEEHAINIFADNLKTLLLQPPVRDKRVLGIDPGFRTGSKVAV VDEIGNLLATAAIYPHPPQKKVSEAKEQLEELITEYNVDLIAIGNGTACRETEELAAE IIKESELDLHYVIVNEAGASVYSASEVAQDEFPKLDVSLRGTVSIARRLQDPLAELVK IDSKHLGVGMYQHDLNQGELDEALETVVESVVNYVGVDLNTASTSLLGYVAGVNKTVA NNIVQWREENGKFSSRDQLKDVYGIGPKTFTQAAGFLRIFDGEDKLAATAIHPESYSA ARKLLKETGFKLKDLDFKENQDLKERLNNLNLKELTDKIGVGFPTLLDIKKNLVKPGR DPREEMSKPVFKQEVMSWDDLKSGMILQGEIRNVVDFGAFVDIGVKEDGLVHISEMSS EYVEDPFEVVKVGDVVKIKILEIDSARKRIALTMNF" misc_feature 106756..108891 /locus_tag="Acear_0101" /note="Transcriptional accessory protein [Transcription]; Region: Tex; COG2183" /db_xref="CDD:32366" misc_feature 106771..107352 /locus_tag="Acear_0101" /note="Tex-like protein N-terminal domain; Region: Tex_N; pfam09371" /db_xref="CDD:150144" misc_feature 107692..107988 /locus_tag="Acear_0101" /note="Uncharacterised protein family (UPF0081); Region: UPF0081; cl00525" /db_xref="CDD:186059" misc_feature 108685..108888 /locus_tag="Acear_0101" /note="S1_Tex: The C-terminal S1 domain of a transcription accessory factor called Tex, which has been characterized in Bordetella pertussis and Pseudomonas aeruginosa. The tex gene is essential in Bortella pertusis and is named for its role in toxin...; Region: S1_Tex; cd05685" /db_xref="CDD:88440" misc_feature order(108709..108711,108733..108735,108763..108765, 108769..108771) /locus_tag="Acear_0101" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88440" gene 109004..109363 /locus_tag="Acear_0102" /db_xref="GeneID:9512089" CDS 109004..109363 /locus_tag="Acear_0102" /note="COGs: COG1098 RNA binding protein (contains ribosomal protein S1 domain); InterPro IPR003029:IPR012340:IPR016027; KEGG: bsu:BSU00630 hypothetical protein; PFAM: RNA binding S1 domain protein; SPTR: P37560 Uncharacterized protein yabR; PFAM: S1 RNA binding domain" /codon_start=1 /transl_table=11 /product="RNA binding S1 domain protein" /protein_id="YP_003826718.1" /db_xref="GI:302390898" /db_xref="GeneID:9512089" /translation="MSVEVGSVVEGKVSGITNFGAFVELSGGETGLIHISEIADTYVK DVNDYLEMNEEIEVKVISIDDDGKIGLSLKQLEGEDRKPKMSFEKQMKKFIEESDEKQ KQLKKSIESKRGGGSRY" misc_feature 109049..109225 /locus_tag="Acear_0102" /note="S1_RPS1_repeat_hs4: Ribosomal protein S1 (RPS1) domain. RPS1 is a component of the small ribosomal subunit thought to be involved in the recognition and binding of mRNA's during translation initiation. The bacterial RPS1 domain architecture consists of...; Region: S1_RPS1_repeat_hs4; cd05692" /db_xref="CDD:88447" misc_feature order(109067..109069,109097..109099,109103..109105) /locus_tag="Acear_0102" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88447" gene 109845..110669 /locus_tag="Acear_0103" /db_xref="GeneID:9512090" CDS 109845..110669 /locus_tag="Acear_0103" /note="COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR010916:IPR006059:IPR011862; KEGG: hor:Hore_21620 phosphate binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: B8D0H2 phosphate binding protein; TIGRFAM: phosphate binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate binding protein" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter substrate-binding protein, PhoT family" /protein_id="YP_003826719.1" /db_xref="GI:302390899" /db_xref="GeneID:9512090" /translation="MFNSRNLVILSVLLMVCMMSVGVASASDTLSVQGSSTVLPIAQR AAEVYMDQNPGVNITVRGGGSGNGIAALVDGAVDVADASRFIKPGELKQAEDNGIYPV PHRVAMDGIAAVVHPSNSVDELTLDEIKAIYTGEITNWKELGGNDERIVVVSRDSSSG TFEVFGEIALEGERVTPSALMQASNGAVASVVADNENAIGYVGLGYLSDNLKAVKVNG VKPTNATVASGKFPIARPLFMFTDGWPEGLTAKFINFVLSSKGQEIAENQGYVPLH" misc_feature 109911..110663 /locus_tag="Acear_0103" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene 110772..111653 /locus_tag="Acear_0104" /db_xref="GeneID:9512091" CDS 110772..111653 /locus_tag="Acear_0104" /note="COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR011864; KEGG: hor:Hore_21615 phosphate ABC transporter, permease protein PstA; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B8D0H1 phosphate ABC transporter, permease protein PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter, permease protein PstA" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter membrane protein 1, PhoT family" /protein_id="YP_003826720.1" /db_xref="GI:302390900" /db_xref="GeneID:9512091" /translation="MHWKTKEKIIKVVLFIFALSSILFLTGIVITLFNEGLPIFEKVG ILEFVFGKEWYPTYDPPGFGIFPLLSASLVVTFGAMIVSVPIGIASAVVISYILPPKV KNIVKPLLELLAGIPSVIYGLFGMKMLGPFLKNVFDLPTGLNGFTASIMLGIMALPII VSLAEDAICSVPKSFRNASLALGATKWETISRVILPTASSGIVTAVILGMGRAIGETM TVLMVAGGSAVIPKDILMPVRPMTASIAAEMGEAPVGSDHYHALFGIGIVLFFITLLF NIIADIASQQFKEKVSG" misc_feature 110790..111611 /locus_tag="Acear_0104" /note="phosphate ABC transporter, permease protein PstC; Region: phosphate_pstC; TIGR02138" /db_xref="CDD:162724" misc_feature 110985..111479 /locus_tag="Acear_0104" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(111024..111029,111036..111041,111054..111056, 111087..111098,111102..111131,111138..111143, 111147..111149,111231..111236,111240..111242, 111246..111248,111255..111260,111264..111266, 111276..111281,111288..111290,111339..111341, 111381..111386,111393..111395,111414..111425, 111432..111437,111474..111479) /locus_tag="Acear_0104" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(111105..111149,111414..111431) /locus_tag="Acear_0104" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(111147..111149,111207..111209,111432..111434, 111468..111470,111477..111479) /locus_tag="Acear_0104" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(111291..111329,111345..111350,111360..111362) /locus_tag="Acear_0104" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 111653..112579 /locus_tag="Acear_0105" /db_xref="GeneID:9512092" CDS 111653..112579 /locus_tag="Acear_0105" /note="COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR005672; KEGG: sat:SYN_00058 ABC-type phosphate transport system, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q2LTG1 ABC-type phosphate transport system, permease component; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter membrane protein 2, PhoT family" /protein_id="YP_003826721.1" /db_xref="GI:302390901" /db_xref="GeneID:9512092" /translation="MESDKSIKNDGVLNQNKLKISDKSIDFRHLKQKLVFGLLGSTLV LSLGILVLIIYFVFSKGLSVISWTFISEMPKNGMTEGGIFPALLGSFYLIVGSISFAT PLGVLSAIYMTEYAEEGKIIRIIRIGVNNLAGVPSVVFGLFGLAVFVKFFNFGVSVLS GALTLGIVILPTIIRASEESLMAVPDEYREASLALGATRWDTVKNVVLPAAAPGILTG CILGVGRVAGETAPILFTAATYYTGQLPTSVFDEIMALPYQIYALVTAGTSPAQQTPL AYGTAVVLLFLVITINLVAIGLRFYYGNMIKD" misc_feature 111911..112525 /locus_tag="Acear_0105" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(111959..111964,111971..111976,111989..111991, 112025..112036,112040..112069,112076..112081, 112085..112087,112151..112156,112160..112162, 112166..112168,112175..112180,112184..112186, 112196..112201,112208..112210,112259..112261, 112301..112306,112313..112315,112334..112345, 112352..112357,112421..112426,112454..112456, 112478..112480,112487..112492,112496..112501, 112508..112513,112520..112525) /locus_tag="Acear_0105" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(112043..112087,112334..112351) /locus_tag="Acear_0105" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(112085..112087,112136..112138,112352..112354, 112415..112417,112424..112426,112454..112456) /locus_tag="Acear_0105" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(112211..112249,112265..112270,112280..112282) /locus_tag="Acear_0105" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 113525..114091 /locus_tag="Acear_0106" /db_xref="GeneID:9512093" CDS 113525..114091 /locus_tag="Acear_0106" /note="COGs: COG1507 conserved hypothetical protein; InterPro IPR007511; KEGG: hor:Hore_00530 hypothetical protein; PFAM: protein of unknown function DUF501; SPTR: B8D060 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF501)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826722.1" /db_xref="GI:302390902" /db_xref="GeneID:9512093" /translation="MERKPTAKDYKVITQQLEREPRNLVGIAKWCQEGYPQVLVTYPV LEEKDELKLFPTTYWLSCPKLVEEIFSLESEGLIQQVQEEIMADSNKEQELTAAHRNY AQKRVGLLKDSDLTKLKEEYPGRWKVVSQSGVGGIMEKEGIKCLHTHYADYLVNRHNP VGKIVDELLEDRFLDSSLDGCSICSKED" misc_feature 113603..114031 /locus_tag="Acear_0106" /note="Protein of unknown function (DUF501); Region: DUF501; cl00652" /db_xref="CDD:153912" gene 114094..114990 /locus_tag="Acear_0107" /db_xref="GeneID:9512094" CDS 114094..114990 /locus_tag="Acear_0107" /note="COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: tex:Teth514_0697 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; SPTR: B6G0K5 Putative uncharacterized protein; PFAM: Ppx/GppA phosphatase family" /codon_start=1 /transl_table=11 /product="Ppx/GppA phosphatase" /protein_id="YP_003826723.1" /db_xref="GI:302390903" /db_xref="GeneID:9512094" /translation="MPKVAAIDIGTNSTRLLIAKIEKDQSINPLATELKTTRLGAGVD KSGYLQNEAIIRTVEALKEYAELIADYQVEAVRAVATSAVRDVSNQQEFINEVKTDTG IEVEIIDGSREADLSYLGATKGLDCQLTDDNLVLDIGGGSTEFIFGSETEIKEKVSVD VGAVRMTEKETKLKSRQELIGELLNPVLNKLQGRVKMLLGVGGTITTLAAVDQQLSPY NPEEVHGYQLELERIKRILSDLSAKTIDERKEVVGLQPERADIIVAGVRILLEVMDNL NISEITVSEADILDGLIYDYCK" misc_feature 114103..114978 /locus_tag="Acear_0107" /note="exopolyphosphatase; Region: exo_poly_only; TIGR03706" /db_xref="CDD:188376" misc_feature 114142..114978 /locus_tag="Acear_0107" /note="Ppx/GppA phosphatase family; Region: Ppx-GppA; pfam02541" /db_xref="CDD:145597" gene 115135..115224 /locus_tag="Acear_R0013" /db_xref="GeneID:9512095" tRNA 115135..115224 /locus_tag="Acear_R0013" /product="tRNA-Leu" /db_xref="GeneID:9512095" gene 115243..115319 /locus_tag="Acear_R0014" /db_xref="GeneID:9512096" tRNA 115243..115319 /locus_tag="Acear_R0014" /product="tRNA-Met" /db_xref="GeneID:9512096" gene 115329..115405 /locus_tag="Acear_R0015" /db_xref="GeneID:9512097" tRNA 115329..115405 /locus_tag="Acear_R0015" /product="tRNA-Met" /db_xref="GeneID:9512097" gene 115594..118029 /locus_tag="Acear_0108" /db_xref="GeneID:9512098" CDS 115594..118029 /locus_tag="Acear_0108" /EC_number="3.1.3.16" /note="COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822:IPR001932:IPR014221; KEGG: drm:Dred_0124 phosphoprotein phosphatase; PFAM: Stage II sporulation E family protein; PRIAM: phosphoprotein phosphatase; SMART: protein phosphatase 2C domain protein; SPTR: A4J0S1 phosphoprotein phosphatase; TIGRFAM: stage II sporulation protein E; PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E" /codon_start=1 /transl_table=11 /product="protein serine/threonine phosphatase" /protein_id="YP_003826724.1" /db_xref="GI:302390904" /db_xref="GeneID:9512098" /translation="MFAKTDLSTYKRLEKKQQAKSGKVKGLIKNLFLELDMLHLVYFF IGLVLSRAVLSPKLLPFGLTFFGVVLYRKIYSNEKTGRVILFFCSTYMGYYTVLGLSW ALGKYLIAGCLFTLIAGFLGYKDKVLTKWQFALLNGGSILVIEVLNLVFFPQPLYNSL IRLLGPILIGVLNLVLLEGLVPLFSSKENFEEINALALLVTLAAFNVGLPNINVGIVN LPRIFSSLIIMLIAINSGGAIAAVVGMVIGLFYGISNSYTVEVTGLYALAGLVSGHFK KEDKLGVIVGFILSVLLYTIFLVEVGNINAIVSEALLAGGIIAIIPKAIINLFEPWIP GTEIHFTETEQQKSTKKQEVISRVQEMSGVFTELANAFEEKAVAEASEDDNLEELLSM LTNQVCSNCEYYNICWDQEFFKTYQRTVDALSVAEEEGRIKSKKLDSIMGGDCNRSVR FSDKINRFLEKYETDTFWQQKIEDSREIIGNQLSGISQILEKMGSDLEMEVKFNNNLQ RAIRSELQSHGIFLNQIDITKDRHTTKMAVTKQSCNGDQECTKQIIPILNQMLDQNFK IEWSECGASLGEDLCSFEIASAARYWVETGIAQVSPDGEEVSGDNYEIIEVDDKETVS VLSDGMGTGKRAALESNTTVQLVGKLINAGFDKKLAIKTVNSALLLRSSEEIFATLDI SAINRYTGEADFIKIGSVPTFVKRSNRNIELVRSSSLPVGIIDNIDIELTQKLQLLPG DMVVMVTDGILDLQDNGTKQEEWMLRILRNNLIDDPQSLAEYILQQAVNLKNRVDDDM TVVVTRLKGYQNK" misc_feature 115711..117963 /locus_tag="Acear_0108" /note="stage II sporulation protein E; Region: spore_II_E; TIGR02865" /db_xref="CDD:163048" misc_feature 117445..117972 /locus_tag="Acear_0108" /note="Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence...; Region: PP2Cc; cl00120" /db_xref="CDD:193664" gene 118126..119526 /locus_tag="Acear_0109" /db_xref="GeneID:9512099" CDS 118126..119526 /locus_tag="Acear_0109" /note="COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterProIPR011063:IPR015262:IPR014729:IPR012795:IPR 012796; KEGG: amt:Amet_4544 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; protein of unkown function DUF1946 PP-loop ATpase; SPTR: A6TWP8 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain" /codon_start=1 /transl_table=11 /product="tRNA(Ile)-lysidine synthetase" /protein_id="YP_003826725.1" /db_xref="GI:302390905" /db_xref="GeneID:9512099" /translation="MIQQVKETIEEYQLLSEGDKVIVSVSGGPDSLALLHILWRLQDD YNLKLHVFHLDHMFRGEESQKDAEYVAQFANKLSIPATIEEYDIPAYIEETGLSNQAA ARKIRYELCTELADSLKADKIAIGQQADDQAETVLMNFLRGAGLDGLSGIEPIRNGIF IRPLLEVWRKDIGDYCKQHELEPRIDSSNLKPVYLRNKVRLELVPYLAEEFNSSIKEN LVRMAEIFRVENSFMEKYTAEKYDQLVIESNTQELILDLEGIKDLDLAIQRRIFRQAL LDFCGTKRDYYTKHIQQMVELSINGETGNLLQLPQGLRLKRSYNRLKFYWRADKTRKV NNFSERYSIPGKYQVEELGIEINLDIIKFENDLQELLNSSSKLYLDHELIGDQIKVRN RKAGDRFRPLGMKGNKKLKDFFIDEKIPAASRDRIPVFTTMNDEIFAVGDLRIDDKFR VTDQTEKVLVIDITKY" misc_feature 118126..118965 /locus_tag="Acear_0109" /note="tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning]; Region: MesJ; COG0037" /db_xref="CDD:30386" misc_feature 118183..118740 /locus_tag="Acear_0109" /note="N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases...; Region: PP-ATPase; cd01992" /db_xref="CDD:30179" misc_feature order(118195..118203,118207..118218,118282..118284, 118288..118290) /locus_tag="Acear_0109" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30179" misc_feature 119287..119499 /locus_tag="Acear_0109" /note="B3/4 domain; Region: B3_4; cl11458" /db_xref="CDD:196242" gene 119543..120094 /locus_tag="Acear_0110" /db_xref="GeneID:9512100" CDS 119543..120094 /locus_tag="Acear_0110" /EC_number="2.4.2.8" /note="COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR000836:IPR005904; KEGG: hor:Hore_00570 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: B8D064 Hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="hypoxanthine phosphoribosyltransferase" /protein_id="YP_003826726.1" /db_xref="GI:302390906" /db_xref="GeneID:9512100" /translation="MRDKLADKIDEILVTEDELQERIAEMGAEITADYNRDDDVVMVG VLRGGIIFMADLARHVKLPVTFDFMDVSSYDGTESSGVVRIIKDLEENIEDRHVLIVE DIIDTGRTLKHVVDFLETRDPASIKICTLLDKPERRTVKKVEVDYNGFEIPDEFAVGY GLDYDERYRNVPFIFVLKPKFYD" misc_feature 119564..120085 /locus_tag="Acear_0110" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene 120200..122155 /locus_tag="Acear_0111" /db_xref="GeneID:9512101" CDS 120200..122155 /locus_tag="Acear_0111" /EC_number="3.4.24.-" /EC_number="3.6.4.3" /note="COGs: COG0465 ATP-dependent Zn protease; InterProIPR003960:IPR011546:IPR003959:IPR000642:IPR 003593:IPR005936; KEGG: hor:Hore_00580 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: B8D065 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: FtsH Extracellular; peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH" /codon_start=1 /transl_table=11 /product="membrane protease FtsH catalytic subunit" /protein_id="YP_003826727.1" /db_xref="GI:302390907" /db_xref="GeneID:9512101" /translation="MKRFSKNIGFYLIIIAIAFLIAQYFISPAPVKADLSYSEFTQLV EAGKIDKVTIIGQELVKGQVADGKEFEVNIPGTIEKVEQILQNNEVDIETEPEPEPPW WASILGYLLPTILIFGFWFFIMQRMQGGGNKMMSFGKNKARRHEEDEKKKVTFDDVAN YEEVKEELVEVVEFLKNPDKFSKLGAEIPKGVLLVGPPGTGKTLMARAVAGEAGVPFF IISGSDFVEMFVGVGASRVRDLFEQGKENAPCIIFIDELDAVGRQRGAGVGGGHDERE QTLNQLLVEMDGFEANEGIILMAATNRPDVLDPALLRPGRFDRQVLVDKPDFKGRKGV LEIHVQDKPLTGDVDLDILAKRTPGFTGADMENLANEAAILAARRNKKEISMLEFDDA IDRVLAGPKKKSRIISDKEKDIVSYHETGHALLGELLEHADSTHKVSIIPRGRAGGFT VNLPEADKNYVTKSELIDKVTSLLGGRVAEEVFLDDISTGAQNDLERATKIVRNMVTD YGMSEEVGPLALGQKNGDQVFLGRDLSKDKNYSEEVASLIDKEVKRFVEEAYDKATRI LSGNKEMVEKMVTELKEEETLVSDDIRRIIAEFKDDYEYNPDDEADEESKKATKNTEN TIEKETDDLDSKLDDSTDKKININLTD" misc_feature 120503..121990 /locus_tag="Acear_0111" /note="ATP-dependent metalloprotease FtsH; Region: FtsH_fam; TIGR01241" /db_xref="CDD:162266" misc_feature 120764..121174 /locus_tag="Acear_0111" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 120785..120808 /locus_tag="Acear_0111" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(120788..120811,120962..120964,121103..121105) /locus_tag="Acear_0111" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 120950..120967 /locus_tag="Acear_0111" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 121145..121147 /locus_tag="Acear_0111" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 121412..121984 /locus_tag="Acear_0111" /note="Peptidase family M41; Region: Peptidase_M41; pfam01434" /db_xref="CDD:144872" gene 122437..124116 /locus_tag="Acear_0112" /db_xref="GeneID:9512102" CDS 122437..124116 /locus_tag="Acear_0112" /EC_number="6.3.4.3" /note="COGs: COG2759 Formyltetrahydrofolate synthetase; InterPro IPR020628:IPR000559; KEGG: hor:Hore_00600 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: B8D067 Formate--tetrahydrofolate ligase; PFAM: Formate--tetrahydrofolate ligase" /codon_start=1 /transl_table=11 /product="Formate-tetrahydrofolate ligase" /protein_id="YP_003826728.1" /db_xref="GI:302390908" /db_xref="GeneID:9512102" /translation="MKSDIEIAQEAELKHITEIAEKLGLNEDEIEMYGDNKAKIKYEA YQERMDNEDSKLILTTAITPTPAGEGKTTTSVGLTQALNQLGHDTTVALREPSLGPCF GVKGGAAGGGYSQVVPMEDINLHFTGDIHAIGVAHNLLAAAIDNHIKQDNDLDLNPND IVFRRVVDMNDRALREVLVGVGGPNGQVREDGFMITVASEVMAILCLAEGVEDLKERL GNILVGYTFDGEPVQAKELNVHGSMAALLKDAIKPNLVQTLENTPAFIHGGPFANIAH GCNSVAATKLAMKTSDITITEAGFGADLGAEKFLDIKCRFADLQPDAVVIVATARALK MHGGMDDASVKELEEENVEAVEAGFENLAKHIENITEEFNLPAVVAINRFPTDTEAEL EKIRELCEEKGANVALSEIFAKGGEGGHELAEKVLEAMEESNDDFDQLYPADMPIDEK IETVAEKIYGADGVNFTDGAKEDIDRLTEQGFDDMPVCMAKTQSSISDDPTKKGRPTD FEITVREINVSAGAGFLVALTGAVMTMPGLPKVPAAEEIDVDGDGNITGLF" misc_feature 122437..124113 /locus_tag="Acear_0112" /note="Formate--tetrahydrofolate ligase; Region: FTHFS; pfam01268" /db_xref="CDD:144749" misc_feature 122485..124065 /locus_tag="Acear_0112" /note="Formyltetrahydrofolate synthetase (FTHFS) catalyzes the ATP-dependent activation of formate ion via its addition to the N10 position of tetrahydrofolate. FTHFS is a highly expressed key enzyme in both the Wood-Ljungdahl pathway of autotrophic CO2...; Region: FTHFS; cd00477" /db_xref="CDD:73210" misc_feature order(122719..122721,122821..122823) /locus_tag="Acear_0112" /note="Potassium binding sites [ion binding]; other site" /db_xref="CDD:73210" misc_feature order(122719..122724,122800..122808) /locus_tag="Acear_0112" /note="Cesium cation binding sites [ion binding]; other site" /db_xref="CDD:73210" gene 124364..125269 /locus_tag="Acear_0113" /db_xref="GeneID:9512103" CDS 124364..125269 /locus_tag="Acear_0113" /note="COGs: COG5495 conserved hypothetical protein; InterPro IPR004455:IPR018931:IPR016040; KEGG: swo:Swol_0100 NADP oxidoreductase, coenzyme F420-dependent; PFAM: Domain of unknown function DUF2520; NADP oxidoreductase coenzyme F420-dependent; SPTR: C6Q3U6 Oxidoreductase domain protein; PFAM: Domain of unknown function (DUF2520); Rossmann-like domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826729.1" /db_xref="GI:302390909" /db_xref="GeneID:9512103" /translation="MEQTKVVIIGAGAVGKSLGYLLANNGYQVLGFISRSLSSAQEGQ ELVGEGIATTEYGDFILKADLIFITTPDQVISQIATKLFREGLVKKDSCLVHCSGALT SEILFSEVENMNEIEYGRLSLHPLQSVADVRKGIEALPNSFFTIEGNEAGEEIGKKVL DTLDADYTVIQSCAKPLYHAAACVASNYLVTIVDLALKMNQQVGISSEKALVGLLPLM EGTLQNIKEMGIVEALTGPISRGDINIIENHLEALEEFMPENLDLYKELGTYTTDIAR RKGSINQDKVIKLKKLLDQEGIKDE" misc_feature 124376..>124693 /locus_tag="Acear_0113" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 124784..125176 /locus_tag="Acear_0113" /note="Domain of unknown function (DUF2520); Region: DUF2520; pfam10728" /db_xref="CDD:151214" gene 125262..126062 /locus_tag="Acear_0114" /db_xref="GeneID:9512104" CDS 125262..126062 /locus_tag="Acear_0114" /EC_number="2.1.2.11" /note="COGs: COG0413 Ketopantoate hydroxymethyltransferase; InterPro IPR003700:IPR015813; KEGG: ere:EUBREC_2501 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: B1C945 Putative uncharacterized protein; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase" /codon_start=1 /transl_table=11 /product="ketopantoate hydroxymethyltransferase" /protein_id="YP_003826730.1" /db_xref="GI:302390910" /db_xref="GeneID:9512104" /translation="MSKVTVTDLKTKKEAGERITMLTAYDYPMAKAIDEAGIDIILVG DSLGMVVLGYDDTLAVTIGDMIHHTKAVNRGVKDALVVTDMPFMSYKTGDISQTVKNA GRIIKESGAQAVKVEGGSEVVAEIEAVVKAGIPVMGHLGLTPQSINQFGGFKVQGKES EAAQKLITDAKALEEAGIFALVLECIPAVLTKEVTEAVEVPTIGIGAGKESDGQVLVT QDLLGIFANFTPKFVRKYADLNDEIKTALKDYKKDVETGEFPSQKESF" misc_feature 125277..126041 /locus_tag="Acear_0114" /note="Ketopantoate hydroxymethyltransferase (KPHMT) is the first enzyme in the pantothenate biosynthesis pathway. Ketopantoate hydroxymethyltransferase (KPHMT) catalyzes the first committed step in the biosynthesis of pantothenate (vitamin B5), which is a...; Region: KPHMT-like; cd06557" /db_xref="CDD:119342" misc_feature order(125277..125282,125337..125348,125355..125357, 125400..125402,125406..125423,125433..125438, 125451..125453,125460..125465,125472..125474, 125481..125483,125520..125525,125556..125558, 125568..125570,125577..125582,125595..125597, 125649..125666,125694..125699,125703..125714, 125796..125798,125916..125918,125925..125930, 125970..125972,125979..125993) /locus_tag="Acear_0114" /note="oligomerization interface [polypeptide binding]; other site" /db_xref="CDD:119342" misc_feature order(125328..125330,125385..125387,125391..125399, 125511..125513,125604..125606,125676..125678, 125691..125693,125811..125813,125904..125906, 125910..125912) /locus_tag="Acear_0114" /note="active site" /db_xref="CDD:119342" misc_feature order(125394..125396,125511..125513,125604..125606) /locus_tag="Acear_0114" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:119342" gene 126095..126943 /locus_tag="Acear_0115" /db_xref="GeneID:9512105" CDS 126095..126943 /locus_tag="Acear_0115" /EC_number="6.3.2.1" /note="COGs: COG0414 Panthothenate synthetase; InterPro IPR003721:IPR014729:IPR004821; KEGG: drm:Dred_0161 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; PRIAM: Pantoate--beta-alanine ligase; SPTR: A4J0V7 Pantothenate synthetase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain" /codon_start=1 /transl_table=11 /product="pantothenate synthetase" /protein_id="YP_003826731.1" /db_xref="GI:302390911" /db_xref="GeneID:9512105" /translation="MELCKSIDEVRDFIGKQQKAGKEVGLVPTMGYFHQGHLALMEKA REENDIVVVSLFVNPTQFGPDEDYNEYPRDLDRDLELAEEAGVDIVFAPEADEVYLSQ AATKVMVEGLTDYLCGAAREGHFTGVCTIVTKLFNIIDPDRAYFGQKDAQQVLVIKRL VKDLNFDLEIVTVTIQREEDGLAISSRNKYLDSKEREAATILYQTLQLAKDLINQGKR DAEAVKERLINKIEAEPLAEIDYVEIVDQSTLEPLVEIKGEVLMALAVYIGDTRLIDN LMLEVN" misc_feature 126095..126931 /locus_tag="Acear_0115" /note="pantoate--beta-alanine ligase; Region: panC; TIGR00018" /db_xref="CDD:161666" misc_feature 126095..126925 /locus_tag="Acear_0115" /note="Pantoate-beta-alanine ligase; Region: PanC; cd00560" /db_xref="CDD:185673" misc_feature order(126176..126187,126194..126196,126200..126205, 126212..126214,126266..126268,126275..126277, 126305..126307,126476..126478,126485..126490, 126530..126535,126539..126544,126551..126553, 126614..126622,126644..126655) /locus_tag="Acear_0115" /note="active site" /db_xref="CDD:185673" misc_feature order(126176..126184,126194..126196,126203..126205, 126212..126214,126275..126277,126485..126490, 126530..126535,126539..126544,126551..126553, 126617..126622,126641..126646) /locus_tag="Acear_0115" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:185673" misc_feature order(126176..126178,126182..126184,126266..126268, 126275..126277,126485..126490,126497..126499, 126551..126553) /locus_tag="Acear_0115" /note="pantoate-binding site; other site" /db_xref="CDD:185673" misc_feature 126194..126205 /locus_tag="Acear_0115" /note="HXXH motif; other site" /db_xref="CDD:185673" gene 126948..127301 /locus_tag="Acear_0116" /db_xref="GeneID:9512106" CDS 126948..127301 /locus_tag="Acear_0116" /EC_number="4.1.1.11" /note="COGs: COG0853 Aspartate 1-decarboxylase; InterPro IPR003190:IPR009010; KEGG: hmo:HM1_0667 aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: B0TBP6 Aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase" /codon_start=1 /transl_table=11 /product="L-aspartate 1-decarboxylase" /protein_id="YP_003826732.1" /db_xref="GI:302390912" /db_xref="GeneID:9512106" /translation="MMRMMHKSKIHRARVTEANLDYVGSITIDRDLIEAADILPNERV QVVNNNNGARFETYVIAGERGSGVVCLNGAAARKVQPGDEVIIISYGLMKDNAARDLE PKVILVDENNRIIKS" misc_feature 126951..127283 /locus_tag="Acear_0116" /note="Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production; Region: Asp_decarbox; cd06919" /db_xref="CDD:132994" misc_feature order(126951..126968,126972..126974,126978..126983, 127005..127016,127056..127058,127062..127064, 127071..127076,127086..127088,127092..127094, 127101..127103,127107..127121,127167..127172, 127176..127181,127203..127205,127215..127223, 127248..127250) /locus_tag="Acear_0116" /note="tetramerization interface [polypeptide binding]; other site" /db_xref="CDD:132994" misc_feature order(126972..126974,126978..126980,127017..127022, 127119..127121) /locus_tag="Acear_0116" /note="active site" /db_xref="CDD:132994" gene 127372..128367 /locus_tag="Acear_0117" /db_xref="GeneID:9512107" CDS 127372..128367 /locus_tag="Acear_0117" /EC_number="6.3.4.15" /note="COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterProIPR013196:IPR004143:IPR003142:IPR011991:IPR 008988:IPR004408; KEGG: pth:PTH_0255 biotin-(acetyl-CoA carboxylase) ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; biotin protein ligase domain protein; PRIAM: Biotin--[acetyl-CoA-carboxylase] ligase; SPTR: C0GJ23 Biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: HTH domain; Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; BirA biotin operon repressor domain" /codon_start=1 /transl_table=11 /product="biotin/acetyl-CoA-carboxylase ligase" /protein_id="YP_003826733.1" /db_xref="GI:302390913" /db_xref="GeneID:9512107" /translation="MSQTSKRKQRVLRILHKNRDQYISGQELSDRLEVSRTAVWKYIQ SLREQGYVIDSSSRLGYCLVKAPDILSPEEIKKDLKTDLLGCEVIYQEEVKSTNSLAK SEARQEAEEGTVIVAKEQVGGKGRLGREYFCPPGGIWFSVILRPNMKPDSASQFSFVA VVALAKTIDELTDSVPEIKWPNDVLINGKKVSGILTEMSAEIDQIDYLVLGIGVNLNI AVDEFPSDLKNKATSIQEESGQQIPKLNFFLSLLEQLEEEYFKLQTEGFEKIIEGWKE YNITLGNEVTVTSNNEVLTGQAVDVDNKGRLLVELPNGTMKKVVAGDVTLNTEYN" misc_feature 127381..128349 /locus_tag="Acear_0117" /note="bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; Provisional; Region: PRK11886" /db_xref="CDD:183359" misc_feature 127384..127614 /locus_tag="Acear_0117" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 127639..128016 /locus_tag="Acear_0117" /note="Biotin/lipoate A/B protein ligase family; Region: BPL_LplA_LipB; cl14057" /db_xref="CDD:187213" misc_feature 128209..128343 /locus_tag="Acear_0117" /note="Biotin protein ligase C terminal domain; Region: BPL_C; pfam02237" /db_xref="CDD:111161" gene 128410..129174 /locus_tag="Acear_0118" /db_xref="GeneID:9512108" CDS 128410..129174 /locus_tag="Acear_0118" /EC_number="2.7.1.33" /note="COGs: COG1521 Putative transcriptional regulator protein; InterPro IPR004619; KEGG: pth:PTH_0258 pantothenate kinase; PFAM: Bvg accessory factor; SPTR: A1HRR0 Putative transcriptional acitvator, Baf family; TIGRFAM: transcriptional activator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III" /codon_start=1 /transl_table=11 /product="pantothenate kinase" /protein_id="YP_003826734.1" /db_xref="GI:302390914" /db_xref="GeneID:9512108" /translation="MILAIDVGNTNTVLGVFADEDLLVDWRISTDRYKTADEYGMLFF DLFNYNDLKADDIERIIISCVVPSVVNALEEVAIKYFGVEPLIVGPGIKTAMDIKIEN PKEVGADRIVNAVAAYNLYGGPVIVVDFGTATTFCLISEQGNYLGGAIAPGIDISMDA LFSYADKLPKVELEKPESVIGKNTLDSLKAGIIYGAVGQVDGVVREIKADLDQEAEVI ATGGLADLVSDESEEIDRTNSLLTLQGLRMISELNS" misc_feature 128410..129171 /locus_tag="Acear_0118" /note="Bordetella pertussis Bvg accessory factor family; Region: Bvg_acc_factor; cl09130" /db_xref="CDD:195799" gene 129193..130161 /locus_tag="Acear_0119" /db_xref="GeneID:9512109" CDS 129193..130161 /locus_tag="Acear_0119" /note="COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR018517:IPR001269:IPR013785:IPR004652; KEGG: tex:Teth514_0273 nifR3 family TIM-barrel protein; PFAM: dihydrouridine synthase DuS; SPTR: C6PIC5 TIM-barrel protein, nifR3 family; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, nifR3 family" /codon_start=1 /transl_table=11 /product="tRNA-U20-dihydrouridine synthase" /protein_id="YP_003826735.1" /db_xref="GI:302390915" /db_xref="GeneID:9512109" /translation="MEIGEVELDNPVMLAPMAGVTDLPFRRIVKEFGCGLVCTEMVSA KGLVYGSSRTEELLTISDQERPVSLQIFGSEPEIMAEAVEKIEEYRPDIIDVNLGCPT PKIVKGGAGSVLMKEPDLVGRIVDALVRATEIPITVKMRKGWDEDHVNAVEIAQTAEE SGVQAVAVHGRTREQFYKGEADWNIIKEVKEAVEVPVIGNGDIFSPQDAEEMIDTTGC DGVMIARGAQGNPWIFKRTLHYLETGELLPPPTIQERIEMVVRHLEALVDYKGEYIAV REMRRHTVQYIKGLYNCTEVKQKVNQAETEEELKEILHNYKRELMD" misc_feature 129199..130140 /locus_tag="Acear_0119" /note="putative TIM-barrel protein, nifR3 family; Region: nifR3_yhdG; TIGR00737" /db_xref="CDD:129820" misc_feature 129223..129918 /locus_tag="Acear_0119" /note="Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and...; Region: DUS_like_FMN; cd02801" /db_xref="CDD:73368" misc_feature order(129235..129243,129313..129315,129400..129402, 129481..129483,129607..129609,129697..129699, 129790..129792,129796..129798,129862..129867) /locus_tag="Acear_0119" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73368" misc_feature order(129400..129402,129490..129495,129607..129609, 129613..129615,129694..129699,129703..129708, 129793..129798,129865..129867) /locus_tag="Acear_0119" /note="active site" /db_xref="CDD:73368" misc_feature order(129490..129492,129613..129615,129697..129699, 129703..129705) /locus_tag="Acear_0119" /note="catalytic residues [active]" /db_xref="CDD:73368" misc_feature order(129493..129495,129607..129609,129694..129696, 129706..129708,129793..129798) /locus_tag="Acear_0119" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73368" gene 130878..131786 /locus_tag="Acear_0120" /db_xref="GeneID:9512110" CDS 130878..131786 /locus_tag="Acear_0120" /note="KEGG: hor:Hore_00720 hypothetical protein; SPTR: B8D079 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826736.1" /db_xref="GI:302390916" /db_xref="GeneID:9512110" /translation="MNKIVSVSLGSSARDHVVETEISDEVFRLERIGTDGDLQKAKKL FTELDGEVAALGMGGIDLHIYTQDSKYKLQDAAKLIADVGETPVVDGSGLKMTLEKRI ISDLKQDYGLDLADKNILLTSAADRFGMASVFDKLGGNVYYGDLIFGLNLPLPIKSLK TIDYAIKLLGPVISRLPFKLLYPTGSKQETTGSNKYQKYYQWADIIAGDFHLIKKYLP YNLDDKIVITNTVTDDDIAMLQKRGVRLLITTTPELKGRSFGTNLLEAVFVSLIDKPV RAIKSNDYLALMDQLDFKPRLEVLNS" gene 131810..132883 /locus_tag="Acear_0121" /db_xref="GeneID:9512111" CDS 131810..132883 /locus_tag="Acear_0121" /note="COGs: COG5322 dehydrogenase; InterPro IPR006151:IPR016040; KEGG: hor:Hore_00730 shikimate/quinate 5-dehydrogenase; PFAM: shikimate/quinate 5-dehydrogenase; SPTR: B8D080 shikimate/quinate 5-dehydrogenase; PFAM: shikimate / quinate 5-dehydrogenase" /codon_start=1 /transl_table=11 /product="shikimate/quinate 5-dehydrogenase" /protein_id="YP_003826737.1" /db_xref="GI:302390917" /db_xref="GeneID:9512111" /translation="MEQFGFLLHPLQVNDLARKFTISKQIPDSILRQIIRFMPQIELS HVTGIESELGNKAEGWLVGCTLTSEQMLKLPVEHVLKQIISAAKKAEKLGAEIVGLGA YTSIIGDGGRRVAEKLDIPVTTGNSYTVATAVKAVKRAADKLGIVLSETHLAVIGATG SIGEACVQLLADEVNDISLVARNEPKLRRLTTSIKSNYQLNRVNYSTDINKALSEAEI VITVSSAIDSIIDPNNLKPGAIVCDVARPRDVAKQVNESREDILVIEGGIVQLPGQVR LNFDLGLPPGRIYACMAETIILALEGRYENYTLGKSVSLEKVKEIQQLADKHGFQLAG LRYVGEKIGQQRFKQVRQAASRA" misc_feature 132176..132703 /locus_tag="Acear_0121" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature order(132287..132295,132350..132355,132476..132481, 132539..132541) /locus_tag="Acear_0121" /note="NAD(P) binding pocket [chemical binding]; other site" /db_xref="CDD:133449" gene 133032..133505 /locus_tag="Acear_0122" /db_xref="GeneID:9512112" CDS 133032..133505 /locus_tag="Acear_0122" /note="COGs: COG0782 transcription elongation factor; InterPro IPR018151:IPR001437:IPR006359; KEGG: hor:Hore_00740 transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; SPTR: B8D081 transcription elongation factor; TIGRFAM: transcription elongation factor GreA; PFAM: domain; transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA" /codon_start=1 /transl_table=11 /product="transcription elongation factor GreA" /protein_id="YP_003826738.1" /db_xref="GI:302390918" /db_xref="GeneID:9512112" /translation="MAEKVILTKEGLNKLEEELSYLKGTKRREVAKRIKQALEFGDIS ENSEYDDAKNEQAFVEGRIKEIENMLNNAEVINEDEVETTEVNIGTTVTIRDLDTEEE YNYKIVGTTEADPFENKISNDSPVGNALLGHKIGEEVEIDAPAGKIVYKILAIQK" misc_feature 133032..133499 /locus_tag="Acear_0122" /note="transcription elongation factor GreA; Reviewed; Region: greA; PRK00226" /db_xref="CDD:178936" misc_feature 133044..133256 /locus_tag="Acear_0122" /note="domain; Region: GreA_GreB_N; pfam03449" /db_xref="CDD:190636" misc_feature 133278..133496 /locus_tag="Acear_0122" /note="C-term; Region: GreA_GreB; pfam01272" /db_xref="CDD:189919" gene 133563..135038 /locus_tag="Acear_0123" /db_xref="GeneID:9512113" CDS 133563..135038 /locus_tag="Acear_0123" /note="COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR004365:IPR004364:IPR012340:IPR016027:IPR 018149:IPR006195:IPR002313; KEGG: hor:Hore_00750 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: B8D082 Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial" /codon_start=1 /transl_table=11 /product="lysyl-tRNA synthetase" /protein_id="YP_003826739.1" /db_xref="GI:302390919" /db_xref="GeneID:9512113" /translation="MEEEQDLNDLMLERRKKLDMLEEKGITVYGEKYERSHVAQEVID NFEELKEDETEVRLTGRLMAVREHGKASFADIEDMSGRIQLYAKEDNLGEDLYELFMS LDIGDQIGIEGLLFKTGRGEVTVQIENFELLAKALRPLPEKWHGLKDVEMRYRQRYVD LIVNSDVRNTFVLRSKIIHTMREHLEEEDFLEVETPLMHPIAGGAEARPFVTHHNALD MDLYLRIAPELYLKRLIVGGFEKVFEIGKNLRNEGISTKHNPEFTSMELYQANADYED MMEITESVIVNIAQEVLGTLEIEYDGQEIDLSPSWTRMTMREAINEYAGVDFSEVDDF KTAQKLAEDHGVDYEEITSVGELINEFFEEFVEDELIQPTFITEYPIEVSPLAKRKPE DSDFTERFELFVAGNELANAFSELNDPIDQKQRFKEQMEQREAGDDEAHMMDYDYIRA LEYGMPPTGGLGIGIDRLVMLLTDSTSIRDVILFPHMRPEQ" misc_feature 133575..135035 /locus_tag="Acear_0123" /note="lysyl-tRNA synthetase; Reviewed; Region: lysS; PRK00484" /db_xref="CDD:179044" misc_feature 133725..134045 /locus_tag="Acear_0123" /note="LysRS_N: N-terminal, anticodon recognition domain of lysyl-tRNA synthetases (LysRS). These enzymes are homodimeric class 2b aminoacyl-tRNA synthetases (aaRSs). This domain is a beta-barrel domain (OB fold) involved in binding the tRNA anticodon stem-...; Region: LysRS_N; cd04322" /db_xref="CDD:58592" misc_feature order(133740..133745,133794..133799,133884..133886, 133962..133964,133971..133979) /locus_tag="Acear_0123" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:58592" misc_feature order(133752..133754,133758..133763,133779..133781, 133812..133814,133818..133820,133872..133874, 133914..133916,133932..133934) /locus_tag="Acear_0123" /note="putative anticodon binding site; other site" /db_xref="CDD:58592" misc_feature 134052..135029 /locus_tag="Acear_0123" /note="Lys_tRNA synthetase (LysRS) class II core domain. Class II LysRS is a dimer which attaches a lysine to the 3' OH group of ribose of the appropriate tRNA. Its assignment to class II aaRS is based upon its structure and the presence of three...; Region: LysRS_core; cd00775" /db_xref="CDD:29820" misc_feature 134148..134162 /locus_tag="Acear_0123" /note="motif 1; other site" /db_xref="CDD:29820" misc_feature order(134244..134246,134310..134312,134316..134318, 134334..134336,134346..134348,134763..134765, 134784..134786,134793..134795,134805..134807, 134961..134963) /locus_tag="Acear_0123" /note="active site" /db_xref="CDD:29820" misc_feature 134307..134318 /locus_tag="Acear_0123" /note="motif 2; other site" /db_xref="CDD:29820" misc_feature 134952..134963 /locus_tag="Acear_0123" /note="motif 3; other site" /db_xref="CDD:29820" gene 135132..135404 /locus_tag="Acear_0124" /db_xref="GeneID:9512114" CDS 135132..135404 /locus_tag="Acear_0124" /note="COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: amt:Amet_1181 hypothetical protein; PFAM: protein of unknown function DUF156; SPTR: A6TMH1 Putative uncharacterized protein; PFAM: Uncharacterised BCR, COG1937" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826740.1" /db_xref="GI:302390920" /db_xref="GeneID:9512114" /translation="MHKEEAKKDLLNRLKTLKGHIGGIERMIEEEQDCIDILVQIAAI KSSIDKVGQSIIEDYAHECILSSIDEEDDIEEAVKETIKTILKFSK" misc_feature 135150..135392 /locus_tag="Acear_0124" /note="Transcriptional regulators CsoR (copper-sensitive operon repressor), RcnR, and FrmR, and related domains; this domain superfamily was previously known as DUF156; Region: CsoR-like_DUF156; cd10148" /db_xref="CDD:197385" misc_feature order(135150..135152,135159..135164,135171..135176, 135183..135185,135192..135197,135201..135206, 135213..135224,135228..135236,135240..135248, 135252..135257,135261..135266,135273..135278, 135285..135290,135294..135302,135306..135314, 135324..135326,135351..135356,135360..135389) /locus_tag="Acear_0124" /note="putative homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:197385" misc_feature order(135150..135152,135159..135164,135171..135176, 135183..135185,135192..135197,135201..135206, 135213..135224,135228..135236,135240..135248, 135252..135257,135261..135266,135273..135278, 135285..135287,135294..135296,135306..135308, 135369..135371,135378..135389) /locus_tag="Acear_0124" /note="putative homodimer interface [polypeptide binding]; other site" /db_xref="CDD:197385" misc_feature order(135228..135230,135306..135308,135369..135371) /locus_tag="Acear_0124" /note="putative allosteric switch controlling residues; other site" /db_xref="CDD:197385" misc_feature order(135231..135233,135306..135308,135318..135320) /locus_tag="Acear_0124" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:197385" misc_feature order(135288..135290,135297..135302,135309..135314, 135318..135320,135324..135326,135351..135356, 135360..135368,135372..135377) /locus_tag="Acear_0124" /note="putative homodimer-homodimer interface [polypeptide binding]; other site" /db_xref="CDD:197385" gene 135490..136752 /locus_tag="Acear_0125" /db_xref="GeneID:9512115" CDS 135490..136752 /locus_tag="Acear_0125" /note="COGs: COG1306 conserved hypothetical protein; KEGG: hor:Hore_00830 hypothetical protein; SPTR: B8D090 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826741.1" /db_xref="GI:302390921" /db_xref="GeneID:9512115" /translation="MKKEFIVVVIFVLLFSVGITARSLDYNSSVNDVNLHKKNNGEEQ LKDSQELKQETSEPIKGIYLTGWVAGSPKRFNRLLNLITETELNAMVIDVKNIEGEVS YNSKVDLTEEIGANVAKIKNIDRLLDKCKENNIYSIARIPVFKDYKLAAYKEYALKYY DLQQSNSEIFSSPEWVNPYSKKVWKYNVDLAIEAVKHGFDEVQFDYIRFPVFFNRSRY NLAVAPSNSKVRIIDDFLRYAKNRLDKLEAPVSIDVFGLTTTGNDLGIGQNFALMAQR IDYISPMVYPSHYQPGIYGLTLPEQTPYSTVFNSMQEAKEKLNGETGQIRPWLQDFSL RYKYGVEEVREQIAAAKASGLDSWLLWNPASNYTWQAFLDNEIVINKKKRLIDIIDDI EGDNDVRVNRRESNAQENESRERPFDRT" misc_feature 135667..136584 /locus_tag="Acear_0125" /note="Uncharacterized conserved protein [Function unknown]; Region: COG1306" /db_xref="CDD:31497" gene 136679..137287 /locus_tag="Acear_0126" /db_xref="GeneID:9512116" CDS 136679..137287 /locus_tag="Acear_0126" /note="COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: amt:Amet_1002 methyltransferase type 12; PFAM: methyltransferase type 11; SPTR: A6TM01 methyltransferase type 12; PFAM: methyltransferase domain" /codon_start=1 /transl_table=11 /product="methyltransferase type 11" /protein_id="YP_003826742.1" /db_xref="GI:302390922" /db_xref="GeneID:9512116" /translation="MLELTEERVMPRKMNPENGLLIEHKVRYRFASQYCQGRVLDIAC GVGYGSEMILALGEGITEIIGVDNEQKVIEYARKHYSHPPITFKTGNANDKELADKIG KFDTIVSLETVEHIKDDFEFINNLNRLLKPDGRVIISTPFGRGREEPCSNPYHYRQYR EEEFRELLSLFSDVELYCQLNETIEIPKPDKKYYLMVAVCQK" misc_feature 136790..137095 /locus_tag="Acear_0126" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature order(136802..136822,136877..136882,136946..136954, 137006..137008) /locus_tag="Acear_0126" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 137831..139355 /locus_tag="Acear_R0016" /db_xref="GeneID:9512117" rRNA 137831..139355 /locus_tag="Acear_R0016" /product="16S ribosomal RNA" /db_xref="GeneID:9512117" gene 139443..139519 /locus_tag="Acear_R0017" /db_xref="GeneID:9512118" tRNA 139443..139519 /locus_tag="Acear_R0017" /product="tRNA-Ile" /db_xref="GeneID:9512118" gene 139540..139615 /locus_tag="Acear_R0018" /db_xref="GeneID:9512119" tRNA 139540..139615 /locus_tag="Acear_R0018" /product="tRNA-Ala" /db_xref="GeneID:9512119" gene 139671..142621 /locus_tag="Acear_R0019" /db_xref="GeneID:9512120" rRNA 139671..142621 /locus_tag="Acear_R0019" /product="23S ribosomal RNA" /db_xref="GeneID:9512120" gene 142733..142849 /locus_tag="Acear_R0021" /db_xref="GeneID:9512121" rRNA 142733..142849 /locus_tag="Acear_R0021" /product="5S ribosomal RNA" /db_xref="GeneID:9512121" gene 142875..142950 /locus_tag="Acear_R0022" /db_xref="GeneID:9512122" tRNA 142875..142950 /locus_tag="Acear_R0022" /product="tRNA-Asn" /db_xref="GeneID:9512122" gene 142960..143035 /locus_tag="Acear_R0023" /db_xref="GeneID:9512123" tRNA 142960..143035 /locus_tag="Acear_R0023" /product="tRNA-Glu" /db_xref="GeneID:9512123" gene 143168..143243 /locus_tag="Acear_R0024" /db_xref="GeneID:9512124" tRNA 143168..143243 /locus_tag="Acear_R0024" /product="tRNA-Val" /db_xref="GeneID:9512124" gene 143249..143326 /locus_tag="Acear_R0025" /db_xref="GeneID:9512125" tRNA 143249..143326 /locus_tag="Acear_R0025" /product="tRNA-Asp" /db_xref="GeneID:9512125" gene 143330..143405 /locus_tag="Acear_R0026" /db_xref="GeneID:9512126" tRNA 143330..143405 /locus_tag="Acear_R0026" /product="tRNA-Thr" /db_xref="GeneID:9512126" gene 143414..143489 /locus_tag="Acear_R0027" /db_xref="GeneID:9512127" tRNA 143414..143489 /locus_tag="Acear_R0027" /product="tRNA-Lys" /db_xref="GeneID:9512127" gene complement(143574..143831) /locus_tag="Acear_0127" /db_xref="GeneID:9512128" CDS complement(143574..143831) /locus_tag="Acear_0127" /note="KEGG: hor:Hore_00820 hypothetical protein; SPTR: B8D089 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826743.1" /db_xref="GI:302390923" /db_xref="GeneID:9512128" /translation="MFEKFTTELSAKIALDNLNELKESDPEEYNKTVKAFIAATEVGI KILKESPEFRQAFAEIHAEFLKYPEAKKVIKKAQETNEEFQ" gene 144249..144734 /locus_tag="Acear_0128" /db_xref="GeneID:9512129" CDS 144249..144734 /locus_tag="Acear_0128" /note="COGs: COG4463 transcriptional repressor of class III stress genes; InterPro IPR008463; KEGG: hor:Hore_00840 transcriptional repressor, CtsR; PFAM: Firmicute transcriptional repressor of class III stress genes; SPTR: B8D091 transcriptional repressor, CtsR; PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR)" /codon_start=1 /transl_table=11 /product="transcriptional repressor, CtsR" /protein_id="YP_003826744.1" /db_xref="GI:302390924" /db_xref="GeneID:9512129" /translation="MSSLSDRIEYYLKNLLTETEAKNIIKIQRNKVAEKFNCVPSQIN YVLKTRFNMASGYVIESQRGGGGYVKIIKIDHDSKLKILKLMLNKIGDSISQRDANNI IQRLYEEDIMTKREKELLETMLHRQNLNLNLPDRDILRANMLGSALQVLAKAEETNKE G" misc_feature 144255..144704 /locus_tag="Acear_0128" /note="Firmicute transcriptional repressor of class III stress genes (CtsR); Region: CtsR; cl01850" /db_xref="CDD:154625" gene 144738..145265 /locus_tag="Acear_0129" /db_xref="GeneID:9512130" CDS 144738..145265 /locus_tag="Acear_0129" /note="COGs: COG3880 Uncharacterized protein with conserved CXXC pairs; InterPro IPR001943:IPR009055; KEGG: hor:Hore_00850 UvrB/UvrC protein; PFAM: UvrB/UvrC protein; SPTR: B8D092 UvrB/UvrC protein; PFAM: UvrB/uvrC motif" /codon_start=1 /transl_table=11 /product="UvrB/UvrC protein" /protein_id="YP_003826745.1" /db_xref="GI:302390925" /db_xref="GeneID:9512130" /translation="MLCQECQKREATVHLTKIINNKKKEIYLCDKCAQEKEELNFGKE GFSFNNLLAGLLSSESGSNTPNSNLNLSYNKAQAECEDCGLNYAEFSRQGKLGCSECY TEFEDKINKVLKKVHGNNRHTGKVPKRTGGVIRTRKEIQKLRKKMQEAVQEEEFEEAA RLRDEIKELEEKIEE" misc_feature 144738..145178 /locus_tag="Acear_0129" /note="Modulator of heat shock repressor CtsR, McsA [Signal transduction mechanisms]; Region: COG3880" /db_xref="CDD:33669" gene 145280..146335 /locus_tag="Acear_0130" /db_xref="GeneID:9512131" CDS 145280..146335 /locus_tag="Acear_0130" /note="COGs: COG3869 Arginine kinase; InterPro IPR000749:IPR014746; KEGG: hor:Hore_00860 arginine kinase; PFAM: ATP:guanido phosphotransferase; SPTR: B8D093 Putative ATP:guanido phosphotransferase Hore_00860; PFAM: ATP:guanido phosphotransferase, C-terminal catalytic domain" /codon_start=1 /transl_table=11 /product="ATP:guanido phosphotransferase" /protein_id="YP_003826746.1" /db_xref="GI:302390926" /db_xref="GeneID:9512131" /translation="MSMTSRINNTLNKWMKASGPDSDVVISSRIRLARNLMELSFPNH ASDKEARKVIDKVEELLAEKESELDFKLLDLETIPTLEKKVMVEKHLISPEHAEPGQH KGLILTDDESVSIMINEEDHIRIQILFSGLQLEEAWDLGDQVDDYLESKLNFAFNEEY GYLTTCPTNAGTGMRASVMVHLPALNLSNQINDVLRAISQLGLAVRGLYGEGTEALGN IYQISNQVTLGPSEEEIIENLQGVIKQIINQERNARKRLMKENKIELKDRIYRSYAVL KYARKISSKEAMKLLSDVKLGVDLGIIDDVSASIFNELMVLISSPALQRLEEKDLNSS QRDEKRADLIRKRIREK" misc_feature 145298..146320 /locus_tag="Acear_0130" /note="ATP:guanido phosphotransferase; Provisional; Region: PRK01059" /db_xref="CDD:179213" misc_feature 145343..146038 /locus_tag="Acear_0130" /note="Phosphagen (guanidino) kinases found in bacteria; Region: bacterial_phosphagen_kinase; cd07930" /db_xref="CDD:153077" misc_feature order(145358..145360,145364..145366,145370..145372, 145547..145549,145625..145627,145649..145651, 145802..145804,145808..145816,145895..145897, 145901..145903,145907..145912,145940..145942) /locus_tag="Acear_0130" /note="ADP binding site [chemical binding]; other site" /db_xref="CDD:153077" misc_feature order(145637..145639,145775..145777,145913..145918) /locus_tag="Acear_0130" /note="phosphagen binding site; other site" /db_xref="CDD:153077" misc_feature order(145886..145930,145934..145951) /locus_tag="Acear_0130" /note="substrate specificity loop; other site" /db_xref="CDD:153077" gene 146355..148796 /locus_tag="Acear_0131" /db_xref="GeneID:9512132" CDS 146355..148796 /locus_tag="Acear_0131" /note="COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR018368:IPR001270:IPR004176:IPR003959:IPR 001943:IPR013093:IPR019489:IPR003593; KEGG: hor:Hore_00870 ATPase AAA; PFAM: ATPase AAA; Clp domain protein; ATPase AAA; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: B8D094 ATPase AAA; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif" /codon_start=1 /transl_table=11 /product="ATPase AAA" /protein_id="YP_003826747.1" /db_xref="GI:302390927" /db_xref="GeneID:9512132" /translation="MIFGRFTERARKVLVLAQEEAKDLGHSYVGTEHLLLGLISEGEG IASKTLEDFDLKSEELKVEVNKLIGDKGSPVQADKLNFTPRTKKVLNLAMEEARRLGQ NYIGTEHLLLGLVKEGEGVAARVLKNSGVELDKLRKKIMNELGTTEKAGKFNQQGRKR NSNTPTLDDFSRDLTALAEEEKLDPVIGRKQEIQRVIQVLSRRKKNNPCLIGEPGVGK TAIAEGLALMIANDDVPETLTDKRVLALDLSSLVAGSKYRGEFEKRLKAVMNEINEAG DIIIFIDELHNLVGAGGAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDSAL ERRFQSVLVEEPSIEETVSILEGLRDVYEAHHRVKITDEAIKAAANLSHRYITDRFLP DKAIDLVDEAGSKIRLQDNTVPSEIKELNKELESVEKEKEAAVKAQEFEKAANLRDKE KQLKEELEETKSEWKNQKGRDESLITKEDIAEIVSDWSGVPVTKLTEDESKKLLRLEE ELHERIVGQDEAIEAVSQAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAKTLAEAM FDDEEAMIRIDMSEYMEKHAVSRLVGAPPGYVGHEEGGQLTEQVRRQPFSVILLDEIE KAHPEVFNMLLQVLEDGQLTDSQGRTVDFKNTIIIMTSNVGANLIENQSGVGFTPSEK NAETSYQRMKEKVTSELKKQFRPEFLNRLDETIVFHALELEHIKEIIDLMLEEVFERL DEKEITIEVTDDAKEVIAEKGFDKEFGARPLKRTIRRMMENPLSEKLIAGEFSDGDHI VVDVDEEENLTFIEA" misc_feature 146361..148781 /locus_tag="Acear_0131" /note="Clp protease ATP binding subunit; Region: clpC; CHL00095" /db_xref="CDD:177027" misc_feature 146403..146561 /locus_tag="Acear_0131" /note="Clp amino terminal domain; Region: Clp_N; pfam02861" /db_xref="CDD:190453" misc_feature 146631..146789 /locus_tag="Acear_0131" /note="Clp amino terminal domain; Region: Clp_N; pfam02861" /db_xref="CDD:190453" misc_feature 146913..147392 /locus_tag="Acear_0131" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 146988..147011 /locus_tag="Acear_0131" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(146991..147014,147201..147203,147312..147314) /locus_tag="Acear_0131" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 147189..147206 /locus_tag="Acear_0131" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 147363..147365 /locus_tag="Acear_0131" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 147897..148343 /locus_tag="Acear_0131" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 147999..148022 /locus_tag="Acear_0131" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(148002..148025,148215..148217,148341..148343) /locus_tag="Acear_0131" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 148203..148220 /locus_tag="Acear_0131" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 148512..148772 /locus_tag="Acear_0131" /note="C-terminal, D2-small domain, of ClpB protein; Region: ClpB_D2-small; pfam10431" /db_xref="CDD:192583" gene 148924..150312 /locus_tag="Acear_0132" /db_xref="GeneID:9512133" CDS 148924..150312 /locus_tag="Acear_0132" /note="COGs: COG1066 ATP-dependent serine protease; InterPro IPR020568:IPR003593:IPR004504; KEGG: bcy:Bcer98_0077 DNA repair protein RadA; SMART: AAA ATPase; SPTR: C3AY12 DNA repair protein radA; TIGRFAM: DNA repair protein RadA; PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA" /codon_start=1 /transl_table=11 /product="DNA repair protein RadA" /protein_id="YP_003826748.1" /db_xref="GI:302390928" /db_xref="GeneID:9512133" /translation="MAKKKVRYVCEECGHEALKWNGQCAGCGSWNTLVKKIHDKQEKK KQEEKKKKAEKGNPPQQIDQITTATANRLKTELSELNRVLGGGIVPGSLILIGGAPGI GKSTLLLQLAYQISCKYGKVLYVSAEESKHQVKLRADRLQVNSSELYVLTETNYFTIE EEVKNLAPELVIIDSIQTIYDPDYDSVPGSIKQVRECTGKLMRLAKTEDIPIFLVGHV TKKGSIAGPKMLEHMVDVVLYFDSEQQQLYRILRSAKNRYGSTDEIGIFEMKQQGLIE VLNPSRHFISERPSGVSGSVIVPCLEGTRPILVEVQALTSTANYGSPTRMTSGVDHRR VSLILAVLEKRLGLYLQGEDVNINIAGGMQIEEPGIDLGIAVAIISSFRELPLPEDLL VLGEIGLSGEVRAVSRMESRIQEAIKLGFKQFIIPDGNLSSLELDVSDLEIEVCGVKQ VSEVLDLILGGE" misc_feature 148924..150306 /locus_tag="Acear_0132" /note="DNA repair protein RadA; Provisional; Region: PRK11823" /db_xref="CDD:183326" misc_feature 148945..150066 /locus_tag="Acear_0132" /note="Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of...; Region: Sms; cd01121" /db_xref="CDD:29987" misc_feature 149215..149238 /locus_tag="Acear_0132" /note="Walker A motif/ATP binding site; other site" /db_xref="CDD:29987" misc_feature order(149218..149220,149230..149238,149293..149295, 149299..149301,149443..149448) /locus_tag="Acear_0132" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29987" misc_feature 149434..149445 /locus_tag="Acear_0132" /note="Walker B motif; other site" /db_xref="CDD:29987" gene 150318..151439 /locus_tag="Acear_0133" /db_xref="GeneID:9512134" CDS 150318..151439 /locus_tag="Acear_0133" /note="COGs: COG1623 nucleic-acid-binding protein (contains the HHH domain); InterPro IPR003390:IPR018906:IPR000445:IPR010994; KEGG: hor:Hore_00890 predicted nucleic-acid-binding protein (contains the HHH domain); PFAM: DNA integrity scanning, DisA, linker region; protein of unknown function DUF147; helix-hairpin-helix motif; SPTR: B8D096 Predicted nucleic-acid-binding protein (Contains the HHH domain); PFAM: DisA bacterial checkpoint controller nucleotide-binding; DisA bacterial checkpoint controller linker region; Helix-hairpin-helix motif" /codon_start=1 /transl_table=11 /product="DNA integrity scanning, DisA, linker region" /protein_id="YP_003826749.1" /db_xref="GI:302390929" /db_xref="GeneID:9512134" /translation="MDTEHDEFKEVFDFLAPGTSFREGLENILRAKTGGLIVVGDSKE VLGIVDGGFNINSELTAARLYELAKMDGAIVLSSDCERILCANAQLVPDPGISSTETG TRHRTAERVAKQTGELVISISQRRDIISLYKNEEKYVLEDIRVILAKANQAIQTLEKY RSVLDQTLNKLSALEFQDLVTVSEVATVLQRTEMVLRIGKEIERYIRELGTEGRLINM QLEELLANVKDEGILLIKDYITQSQIESEEGAEGEEDDENVINSPEDILINISDYASD DLVSLTTISKRLGYGGNMSVLDLSVSPRGYRLLRKIPRLPMPVIENLVDNFSDFQAIL NASIDELDDVDGVGEVRAQAIKEGLKRLRDQSLLEQRMY" misc_feature 150327..151433 /locus_tag="Acear_0133" /note="DNA integrity scanning protein DisA; Provisional; Region: PRK13482" /db_xref="CDD:184079" misc_feature 150378..150731 /locus_tag="Acear_0133" /note="DisA bacterial checkpoint controller nucleotide-binding; Region: DisA_N; pfam02457" /db_xref="CDD:190315" misc_feature 150735..151220 /locus_tag="Acear_0133" /note="DisA bacterial checkpoint controller linker region; Region: DisA-linker; pfam10635" /db_xref="CDD:151152" gene 151506..152015 /locus_tag="Acear_0134" /db_xref="GeneID:9512135" CDS 151506..152015 /locus_tag="Acear_0134" /note="COGs: COG1329 transcriptional regulators similar to M. xanthus CarD; InterPro IPR003711; KEGG: hor:Hore_00900 transcriptional regulator, CarD family; PFAM: transcription factor CarD; SPTR: B8D097 transcriptional regulator, CarD family; PFAM: CarD-like/TRCF domain" /codon_start=1 /transl_table=11 /product="CarD family transcriptional regulator" /protein_id="YP_003826750.1" /db_xref="GI:302390930" /db_xref="GeneID:9512135" /translation="MFETGDKIVYPNHGAGTITDIEKKEVLGETKKYYVMQLPIGEMR VMIPMDNVDDIGIREVISSDRVDDVFQILKGEKSEMSQNWNRRYRANTEKIKSGDIFE VAEVVRNLTLRDIEKGLSTGEKKMLSNSRQILISELVLAEDKDKEEIEEEIDEIFFDT EEENEEDEE" misc_feature 151506..151928 /locus_tag="Acear_0134" /note="CarD-like/TRCF domain; Region: CarD_TRCF; cl00588" /db_xref="CDD:193879" gene 152064..153188 /locus_tag="Acear_0135" /db_xref="GeneID:9512136" CDS 152064..153188 /locus_tag="Acear_0135" /note="COGs: COG4956 Integral membrane protein (PIN domain superfamily); InterPro IPR002716:IPR002792:IPR006596; KEGG: hor:Hore_00910 PilT protein domain protein; PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; SPTR: B8D098 PilT protein domain protein; PFAM: TRAM domain; PIN domain" /codon_start=1 /transl_table=11 /product="PilT protein domain protein" /protein_id="YP_003826751.1" /db_xref="GI:302390931" /db_xref="GeneID:9512136" /translation="MLKRIWRGICTILGAVVGYQIIEVLGLAEKFDFSLNTIDQLLTS NQIYGIVIGGIIGYLLLPVAVERLFQIILNFEDKLERIPFQDIVAGIAGLIIGLIIGI LLIFAFPLSSIPQFGLSLQVLVNLVLGYLGVNLAIKKREEFFRLFENLPNIFNKDKIL SSSDQEENQESTPPCKILDTSVIIDGRIADICQTDFIDGVFVIPEFVLEELQHIADSS DILKRNRGRRGLEILNKMQKELDVPVEIYEGDFEDIDEVDSKLVKLAKLLGGKVITND YNLNKVSELQGVSVLNINELANAVKPVVLPGEEMTVEIIKEGKEPGQGVGYLDDGTMI VVDDGKQNIGDEIDVLVTSVLQTAAGRMIFAKPKAAEQAL" misc_feature 152064..153170 /locus_tag="Acear_0135" /note="Integral membrane protein (PIN domain superfamily) [General function prediction only]; Region: COG4956" /db_xref="CDD:34564" misc_feature 152589..152969 /locus_tag="Acear_0135" /note="PIN domain of Thermus Thermophilus Hb8, uncharacterized Bacillus subtilis YacL, and other bacterial homologs; Region: PIN_YacL; cd09877" /db_xref="CDD:189047" misc_feature order(152598..152600,152691..152693,152835..152837, 152889..152891) /locus_tag="Acear_0135" /note="putative active site [active]" /db_xref="CDD:189047" gene 153312..154004 /locus_tag="Acear_0136" /db_xref="GeneID:9512137" CDS 153312..154004 /locus_tag="Acear_0136" /EC_number="2.7.7.60" /note="COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; InterPro IPR018294:IPR001228; KEGG: cce:Ccel_0342 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: C6PB55 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" /codon_start=1 /transl_table=11 /product="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" /protein_id="YP_003826752.1" /db_xref="GI:302390932" /db_xref="GeneID:9512137" /translation="MESITAIIPAAGQGKRMKSKLNKQYLSLLDKPVLAHTVEVFQNC DLITEIIVVVKEDEIDYCRRKVIEKYNYNKVKALIRGGQSRQKSVHNGLQSVDNADYV LIHDGARPLLTEDMLCRAVDQVKDYKAVGVAVPVKDTIKRIDNDGYVAETPVRDKLWA IQTPQAFEYSLVSEAYNKAMKEGISGTDTSILVERLGQKVKLIRGSYENLKITTPEDL INAEAIIKRRQQ" misc_feature 153321..153965 /locus_tag="Acear_0136" /note="CDP-ME synthetase is involved in mevalonate-independent isoprenoid production; Region: CDP-ME_synthetase; cd02516" /db_xref="CDD:133009" misc_feature order(153336..153338,153342..153359,153378..153380, 153555..153566,153573..153575,153627..153635, 153942..153944) /locus_tag="Acear_0136" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133009" misc_feature order(153636..153638,153693..153695,153717..153719, 153723..153725,153777..153794,153870..153875, 153879..153884,153891..153893,153906..153917, 153927..153932) /locus_tag="Acear_0136" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133009" gene 154001..154483 /locus_tag="Acear_0137" /db_xref="GeneID:9512138" CDS 154001..154483 /locus_tag="Acear_0137" /EC_number="4.6.1.12" /note="COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; InterPro IPR020555:IPR003526; KEGG: ere:EUBREC_1445 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; PRIAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; SPTR: C4Z8W9 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: YgbB family; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" /codon_start=1 /transl_table=11 /product="2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" /protein_id="YP_003826753.1" /db_xref="GI:302390933" /db_xref="GeneID:9512138" /translation="MRVGIGYDVHQLISGEDLILGGIKIDHSSGLKGHSDADVLLHAV MDAMLGAIGAGDIGKHFPDSDPAYEGISSLKLLSEVNSLLTKQGYSIINIDVTIIAQK PKLASYLEKMEKRIAEVLDISLTKINLKATTTEGLGYIGNEAGIAAQAIVSLESAGYE " misc_feature 154004..154462 /locus_tag="Acear_0137" /note="MECDP_synthase (2-C-methyl-D-erythritol-2,4-cyclodiphosphate synthase), encoded by the ispF gene, catalyzes the formation of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MEC) in the non-mevalonate deoxyxylulose (DOXP) pathway for isoprenoid...; Region: MECDP_synthase; cd00554" /db_xref="CDD:100025" misc_feature order(154004..154009,154013..154015,154019..154021, 154025..154033,154043..154045,154148..154150, 154154..154159,154163..154168,154277..154279, 154283..154285,154289..154291,154310..154312, 154316..154318,154382..154384,154388..154393, 154400..154408,154445..154447,154451..154453, 154457..154459) /locus_tag="Acear_0137" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100025" misc_feature order(154022..154024,154028..154030,154124..154126) /locus_tag="Acear_0137" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:100025" misc_feature order(154166..154168,154172..154174,154298..154303, 154307..154318,154391..154399) /locus_tag="Acear_0137" /note="CDP-binding sites; other site" /db_xref="CDD:100025" gene 154502..155275 /locus_tag="Acear_0138" /db_xref="GeneID:9512139" CDS 154502..155275 /locus_tag="Acear_0138" /note="COGs: COG0517 FOG: CBS domain; InterPro IPR000644:IPR015111:IPR013785; KEGG: hor:Hore_00940 hypothetical protein; PFAM: hypothetical protein; HutP family protein; SMART: hypothetical protein; SPTR: B8D0A1 hypothetical protein; PFAM: HutP; CBS domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826754.1" /db_xref="GI:302390934" /db_xref="GeneID:9512139" /translation="MIVKDIMIKDVITVNENVTISEAERIMTVNDIGRLIVEDDLGKV VGMITDGDLVKERNFDLKVKEIMTTDLIKGYQTQSIQEVAQIVSDNQIGGVPIFDETD NLVGIVTVDDIVSGYMKEENTAKISPESSAIYLSMTRSREYENYWLDKINGYGYKAAI TQTGANAEDLPIKLRESATVAAIARKVIKERAKEKVAVSNAVRDAYNQLNLINPGLGG GFKVAIVRGEGKVAVSAFGKFGHALVDGPEQIALGTSII" misc_feature 154508..154843 /locus_tag="Acear_0138" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature 154526..154849 /locus_tag="Acear_0138" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair; cl10010" /db_xref="CDD:99705" misc_feature 154895..155260 /locus_tag="Acear_0138" /note="HutP; Region: HutP; cl07944" /db_xref="CDD:186718" gene 155390..156856 /locus_tag="Acear_0139" /db_xref="GeneID:9512140" CDS 155390..156856 /locus_tag="Acear_0139" /EC_number="6.1.1.17" /EC_number="6.1.1.24" /note="COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterProIPR001412:IPR020058:IPR014729:IPR020061:IPR 020751:IPR008925:IPR020060:IPR004527; KEGG: hor:Hore_00950 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: B8D0A2 Glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA synthetase ;glutamate--tRNA(Gln) ligase" /protein_id="YP_003826755.1" /db_xref="GI:302390935" /db_xref="GeneID:9512140" /translation="MSDIRVRFAPSPTGQIHIGNIRTALFTWLYARKHNGTTVLRIED TDQERSTSEFEEIILQETDWLGLDWDEGVRAGGDYGPYRQSDRLDIYDKYIDRLIEED KAYYCYCTDEELEQMREEAKAKGKPPKYNGRCRNLSEEERKELEAEGREPAVRFKMPT EEIKIVVNDLVHGEVEFSSEVLDDFVIVKSDGLPTYNFAVVIDDHLMEISHVIRGEDH LSNTPKQQLIYDALDWEMPEFGHLPMILGEDKSKLSKRSGEAYVYVSEYRQKGYLPEA LINFLALLGWSSADDEELFTVEEIIDNFSMERVNNSPSVFDVEKLNWMNGHHIRESEL DRIVDLAIPYLQEAGYIADELSDEEYNYVAQIVDVVRDSLDYVAQITDHVDIFFGELE YENKEEVIDCFQQEDVDLVLETLKDRLAVLDDYSPDSVLEEMRAILNDLPVGGRLFYH PTRYALTGKGSGPELYQVVSILGKEETINRLDKALNLV" misc_feature 155390..156844 /locus_tag="Acear_0139" /note="glutamyl-tRNA synthetase; Reviewed; Region: gltX; PRK01406" /db_xref="CDD:179296" misc_feature 155399..>155713 /locus_tag="Acear_0139" /note="catalytic core domain of discriminating glutamyl-tRNA synthetase; Region: GluRS_core; cd00808" /db_xref="CDD:173905" misc_feature order(155408..155410,155414..155422,155444..155449, 155453..155458,155516..155518,155711..155713) /locus_tag="Acear_0139" /note="active site" /db_xref="CDD:173905" misc_feature 155438..155449 /locus_tag="Acear_0139" /note="HIGH motif; other site" /db_xref="CDD:173905" misc_feature <155954..156382 /locus_tag="Acear_0139" /note="catalytic core domain of discriminating glutamyl-tRNA synthetase; Region: GluRS_core; cd00808" /db_xref="CDD:173905" misc_feature order(155975..155977,155987..155989,156029..156034, 156038..156043,156116..156121,156143..156148) /locus_tag="Acear_0139" /note="active site" /db_xref="CDD:173905" misc_feature 156143..156157 /locus_tag="Acear_0139" /note="KMSKS motif; other site" /db_xref="CDD:173905" gene 157163..157834 /locus_tag="Acear_0140" /db_xref="GeneID:9512141" CDS 157163..157834 /locus_tag="Acear_0140" /EC_number="2.3.1.30" /note="COGs: COG1045 serine acetyltransferase; InterPro IPR001451:IPR011004:IPR005881; KEGG: chy:CHY_2339 serine acetyltransferase; PRIAM: serine O-acetyltransferase; SPTR: C6PB49 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: serine acetyltransferase, N-terminal; Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase" /codon_start=1 /transl_table=11 /product="serine O-acetyltransferase" /protein_id="YP_003826756.1" /db_xref="GI:302390936" /db_xref="GeneID:9512141" /translation="MLKMIKADIDAVFERDPAARSLVEVLLTYSGLHAIIMHRIAHWL QNKNLSLLARIISQFSRFLTGIEIHPGAEIGTGFFIDHGMGVVIGETAEIGDDVTLYQ GVTLGGTGKETGKRHPTLGNNVMVSAGAKVLGSIEIGDNVKIGAGAVVLDPVPANTTV VGVPGKVVVQDGERICGEIDLEHGNLPDPVEEMLRCMNNRIEKLENKLNNSDQKFSES KDKKE" misc_feature <157163..157267 /locus_tag="Acear_0140" /note="Serine acetyltransferase, N-terminal; Region: SATase_N; pfam06426" /db_xref="CDD:191519" misc_feature 157175..157639 /locus_tag="Acear_0140" /note="serine O-acetyltransferase; Region: cysE; TIGR01172" /db_xref="CDD:188118" misc_feature 157352..157639 /locus_tag="Acear_0140" /note="Serine acetyltransferase (SAT): SAT catalyzes the CoA-dependent acetylation of the side chain hydroxyl group of L-serine to form O-acetylserine, as the first step of a two-step biosynthetic pathway in bacteria and plants leading to the formation of L-...; Region: LbH_SAT; cd03354" /db_xref="CDD:100045" misc_feature order(157355..157357,157361..157363,157406..157408, 157508..157510,157598..157600,157607..157609, 157613..157615) /locus_tag="Acear_0140" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:100045" misc_feature order(157403..157408,157463..157468,157484..157489, 157508..157513,157544..157546,157589..157591, 157595..157600,157607..157609,157613..157615, 157637..157639) /locus_tag="Acear_0140" /note="active site" /db_xref="CDD:100045" misc_feature order(157403..157408,157484..157486,157508..157513) /locus_tag="Acear_0140" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100045" misc_feature order(157463..157468,157484..157489,157544..157546, 157589..157591,157595..157600,157607..157609, 157613..157615,157637..157639) /locus_tag="Acear_0140" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:100045" gene 157841..159286 /locus_tag="Acear_0141" /db_xref="GeneID:9512142" CDS 157841..159286 /locus_tag="Acear_0141" /EC_number="6.1.1.16" /note="COGs: COG0215 Cysteinyl-tRNA synthetase; InterProIPR015803:IPR015273:IPR014729:IPR009080:IPR 002308; KEGG: cth:Cthe_2065 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; SPTR: C7HE23 Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="cysteinyl-tRNA synthetase" /protein_id="YP_003826757.1" /db_xref="GI:302390937" /db_xref="GeneID:9512142" /translation="MTLQIYNTLTQKKEEFEPLDQDEVKLYSCGPTVYDYFHIGNARA FILPDILKRYLEYKGYNVLHVTNFTDVDDKMIKRANEEEIEIEELADRFITAYFEDTE RLNIKQADVYPKATEHISDIIELVKKLEDKGYAYEVDGDVFFAVRKFADYGKLSNQEL EELTSGSRVEVNDKKEDPLDFVLWKKSKEGEPSWESPWGTGRPGWHIECSAMSMCYLG EEFDFHTGGVDLVFPHHENEIAQNEAGVGSQVVNYWLHNGYINVDGEKMSKSLGNFFT TRDILQDYSAEVLRFFLISKHYRSPINFSDAELDNAAKSLQRLQNTVNKLKDLLDRDR ADLKPGNKEELQELEKKIKAKREKFEEAMDDDLNTALAIGALHELAKELNIVVNDADF ELNQANIIVLEKAYDTFKELSQQVLGINLETEDDISDNLTSDLIGLLLEVRNKARQNQ DWELADQIRDELSELGIILEDTPQGTDWKLE" misc_feature 157841..159283 /locus_tag="Acear_0141" /note="cysteinyl-tRNA synthetase; Validated; Region: cysS; PRK00260" /db_xref="CDD:178951" misc_feature 157850..>158197 /locus_tag="Acear_0141" /note="catalytic core domain of cysteinyl tRNA synthetase; Region: CysRS_core; cd00672" /db_xref="CDD:173899" misc_feature order(157925..157936,157952..157954,157958..157963, 157970..157975,158039..158041,158045..158047, 158186..158188) /locus_tag="Acear_0141" /note="active site" /db_xref="CDD:173899" misc_feature 157952..157963 /locus_tag="Acear_0141" /note="HIGH motif; other site" /db_xref="CDD:173899" misc_feature <158453..158755 /locus_tag="Acear_0141" /note="catalytic core domain of cysteinyl tRNA synthetase; Region: CysRS_core; cd00672" /db_xref="CDD:173899" misc_feature 158636..158650 /locus_tag="Acear_0141" /note="KMSKS motif; other site" /db_xref="CDD:173899" misc_feature 158756..159274 /locus_tag="Acear_0141" /note="Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains; Region: Anticodon_Ia_like; cl12020" /db_xref="CDD:196302" misc_feature order(158759..158761,158771..158773,158780..158782, 158789..158791,158801..158806,158858..158863, 158960..158962,158981..158983,158990..158992, 158999..159001) /locus_tag="Acear_0141" /note="tRNA binding surface [nucleotide binding]; other site" /db_xref="CDD:153408" misc_feature order(158789..158791,158798..158803,158858..158863, 158999..159001) /locus_tag="Acear_0141" /note="anticodon binding site; other site" /db_xref="CDD:153408" gene 159302..159712 /locus_tag="Acear_0142" /db_xref="GeneID:9512143" CDS 159302..159712 /locus_tag="Acear_0142" /note="COGs: COG1939 conserved hypothetical protein; InterPro IPR000999:IPR008226; KEGG: drm:Dred_0194 ribonuclease III; PFAM: ribonuclease III; SMART: ribonuclease III; SPTR: A4J0Z0 Ribonuclease III; PFAM: RNase3 domain" /codon_start=1 /transl_table=11 /product="ribonuclease III" /protein_id="YP_003826758.1" /db_xref="GI:302390938" /db_xref="GeneID:9512143" /translation="MFNDILELPERPRLFSPETMAYIGDSIYEVFIRSYLIEQGLRKG NSLHQQAVKYVNAGAQAELLQQLESYLTEEEEAIVRRGRNSNSGSVPKNADVVDYRYS TAFEALLGYLYLEGKKVRLEEVLTEIKGIIDEIE" misc_feature 159326..159697 /locus_tag="Acear_0142" /note="RIBOc. Ribonuclease III C terminal domain. This group consists of eukaryotic, bacterial and archeal ribonuclease III (RNAse III) proteins. RNAse III is a double stranded RNA-specific endonuclease. Prokaryotic RNAse III is important in post-...; Region: RIBOc; cd00593" /db_xref="CDD:29697" misc_feature order(159353..159358,159365..159370,159377..159379, 159386..159391,159398..159403,159407..159415, 159440..159442,159638..159640,159665..159667) /locus_tag="Acear_0142" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29697" misc_feature order(159353..159355,159362..159364,159374..159376, 159608..159610,159617..159619) /locus_tag="Acear_0142" /note="active site" /db_xref="CDD:29697" misc_feature order(159362..159364,159608..159610,159617..159619) /locus_tag="Acear_0142" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:29697" gene 159725..160441 /locus_tag="Acear_0143" /db_xref="GeneID:9512144" CDS 159725..160441 /locus_tag="Acear_0143" /EC_number="2.1.1.148" /note="COGs: COG1351 alternative thymidylate synthase; InterPro IPR003669; KEGG: tye:THEYE_A0969 thymidylate synthase, flavin-dependent; PFAM: thymidylate synthase complementing protein ThyX; PRIAM: Thymidylate synthase (FAD); SPTR: B5YKN7 Thymidylate synthase, flavin-dependent; TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent" /codon_start=1 /transl_table=11 /product="thymidylate synthase (FAD)" /protein_id="YP_003826759.1" /db_xref="GI:302390939" /db_xref="GeneID:9512144" /translation="MESKLNVKLINHTPEPERTAASAARLCYSPVGAEKLVEDMTDEE IEDLLNIILGNGHYSTLEHVTFTFAIEGISRVTSHQLVRHRIASYSQQSQRYVREKDQ FNYIIPDKIKDNEELTELFIENMKQQQKLYNKLTAGLMEDGYEEKEAIEAARYLLPNA TETKIVVTMNARSLLHFFEVRCCNRAQREIREMANEMLNQVKDIAPIIFNNAGPTCVT EGRCAEGAMSCGRINELKEE" misc_feature 159725..160384 /locus_tag="Acear_0143" /note="Thymidylate synthase complementing protein; Region: Thy1; cl03630" /db_xref="CDD:194652" gene 160451..161182 /locus_tag="Acear_0144" /db_xref="GeneID:9512145" CDS 160451..161182 /locus_tag="Acear_0144" /note="COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537:IPR004441; KEGG: cdf:CD0055 tRNA/rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: Q18CE0 Putative tRNA/rRNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: SpoU rRNA methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, , group 3" /codon_start=1 /transl_table=11 /product="RNA methyltransferase, TrmH family, group 3" /protein_id="YP_003826760.1" /db_xref="GI:302390940" /db_xref="GeneID:9512145" /translation="MKKIEGRNPVMEALKSERRIDEILIYQNAEGVNELLKKAKAEGI KLKRVAKEKLDNLADSYSHQGVIAFGEPIKYLSLDQLIDKAYNKTDDPLFILLDEIKD PHNFGSILRTADAVGAQGVIIPKRRSVGLTSAVGKASAGAIEHIPVAQVTNLVRAMEE LKENRFWIAGADMEAEGFCYQQDLTGPLGIVIGSEGAGMRRLVKERCDFLIKLPMKGR INSLNAAVAGAVLMYEALRQRNYSD" misc_feature 160460..161167 /locus_tag="Acear_0144" /note="rRNA methylase, putative, group 3; Region: rRNA_methyl_3; TIGR00186" /db_xref="CDD:129290" misc_feature 160460..160678 /locus_tag="Acear_0144" /note="RNA 2'-O ribose methyltransferase substrate binding; Region: SpoU_sub_bind; pfam08032" /db_xref="CDD:149230" misc_feature 160724..161149 /locus_tag="Acear_0144" /note="SpoU rRNA Methylase family; Region: SpoU_methylase; cl00362" /db_xref="CDD:193788" gene 161205..162530 /locus_tag="Acear_0145" /db_xref="GeneID:9512146" CDS 161205..162530 /locus_tag="Acear_0145" /note="COGs: COG2720 Uncharacterized vancomycin resistance protein; InterPro IPR007391:IPR011098; KEGG: chy:CHY_0544 VanW domain-containing protein; PFAM: VanW family protein; G5 domain protein; SPTR: A1HTH4 VanW family protein; PFAM: Putative peptidoglycan binding domain; VanW like protein; G5 domain" /codon_start=1 /transl_table=11 /product="VanW family protein" /protein_id="YP_003826761.1" /db_xref="GI:302390941" /db_xref="GeneID:9512146" /translation="MKNSLLAALVALTLLFSIGLGIYIGSYFFFKQHEDVIFSGVMIE GYDFSGLTKKQAKERLKKLTEPLLQEPLVLERDNDKWLLRPDDIELKFKNRGALNKAF GIGRSGTLLQRSIAVWQSAEYGKSLTVDISYNEDKLDEKLQQIANEVNISSSNAYLDL ETEELISFQLGKRLRLEESKQKIISRFNNFKKIPVKLVIEKKVPEVNREKLKEWNLTN QLSSYKTSFDTEKENRVHNIKLAAQKINATLLKSGEVFSFNQTVGRRSLKNGFKQATE IVNQEFVTGVGGGVCQVSSTLYNAVLLGDLKVLERHNHSRPVGYIPLGRGAAIYNGYL DFKFKNTSSDPIMILAKVLENSLEIAIMGQSKDYQIEISTSQPKVLDYGQVKKKAKVE ERKVVKEGKQGYQVKVVKKIIVDNELINKEIISQDVYQPVDKVIKVPVK" misc_feature 161472..161780 /locus_tag="Acear_0145" /note="Putative peptidoglycan binding domain; Region: PG_binding_4; pfam12229" /db_xref="CDD:152664" misc_feature 161898..162293 /locus_tag="Acear_0145" /note="VanW like protein; Region: VanW; pfam04294" /db_xref="CDD:146762" gene 162656..163309 /locus_tag="Acear_0146" /db_xref="GeneID:9512147" CDS 162656..163309 /locus_tag="Acear_0146" /note="COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR000792:IPR000943:IPR007627:IPR013249:IPR 011991:IPR013325:IPR013324:IPR014218:IPR014284:IPR016371; KEGG: hor:Hore_01000 sporulation sigma factor SigH; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: B8D0A7 sporulation sigma factor SigH; TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 30 subunit, SigH" /protein_id="YP_003826762.1" /db_xref="GI:302390942" /db_xref="GeneID:9512147" /translation="MGIELTEDKYEEYTEYDQLTDDELVQFAQDGNQLAMEYLLKKYK NFVRNRARSYFLIGAGRDDLVQEGMIGLYKAICDYKVERLASFQSFAELCITRQLITA IKTATRQKHQPLNSYVSFDQPIYDQNSKRTLLDVLEGSELNNPEEQFISYEAYKLLEE NIKERLSGLELNVLLEYLKGKTYQDIAEALDRHVKSVDNALQRIKKKLEDFLEENDI" misc_feature 162707..163306 /locus_tag="Acear_0146" /note="RNA polymerase factor sigma-70; Validated; Region: PRK08295" /db_xref="CDD:181361" misc_feature 162770..162982 /locus_tag="Acear_0146" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature <163172..163279 /locus_tag="Acear_0146" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cl01055" /db_xref="CDD:197420" gene 163480..163554 /locus_tag="Acear_R0028" /db_xref="GeneID:9512148" tRNA 163480..163554 /locus_tag="Acear_R0028" /product="tRNA-Thr" /db_xref="GeneID:9512148" gene 163627..164823 /locus_tag="Acear_0147" /db_xref="GeneID:9512149" CDS 163627..164823 /locus_tag="Acear_0147" /note="COGs: COG0050 GTPase - translation elongation factors; InterProIPR000795:IPR004161:IPR004160:IPR009001:IPR 009000:IPR004541:IPR005225; KEGG: hor:Hore_01150 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: B8D0A8 Elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU" /codon_start=1 /transl_table=11 /product="translation elongation factor 1A (EF-1A/EF-Tu)" /protein_id="YP_003826763.1" /db_xref="GI:302390943" /db_xref="GeneID:9512149" /translation="MAKEKFERDKPHMNIGTIGHVDHGKTTTTAAITKVLSKGEEGSA NFEDIDNAPEEQERGITIATSHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAL LVVSAADGPMPQTREHLLLARQVNVPNIVVFLNKADMVDDEELIELVEMEVRELLNEY DFNGDEVPIIVGSGLKALECGCGDRDCEWCGQILELMDAIDEYLPEPERDTDKPFLLP VEDVFTIKGRGTVATGRLERGKLHPGDEAELVGVKDTQETVVTGVEMFRKMLDEAVAG DNIGALLRGVDREEIERGQVLAEPGSITPHTEFEAEVYVLSKDEGGRHTPFFDGYRPQ FYFRTTDVTGDINLPDDVEMVMPGDNVEMGVKLITPIAMEEGLRFAIREGGKTVGAGV ITEIIE" misc_feature 163627..164820 /locus_tag="Acear_0147" /note="elongation factor Tu; Reviewed; Region: PRK00049" /db_xref="CDD:178823" misc_feature 163657..164247 /locus_tag="Acear_0147" /note="EF-Tu subfamily. This subfamily includes orthologs of translation elongation factor EF-Tu in bacteria, mitochondria, and chloroplasts. It is one of several GTP-binding translation factors found in the larger family of GTP-binding elongation factors; Region: EF_Tu; cd01884" /db_xref="CDD:133284" misc_feature 163681..163704 /locus_tag="Acear_0147" /note="G1 box; other site" /db_xref="CDD:133284" misc_feature order(163684..163686,163690..163692,163702..163707, 163714..163716,163723..163728,163819..163824, 163876..163881,163948..163953,163957..163968, 163975..163977,164068..164070,164080..164082, 164158..164163) /locus_tag="Acear_0147" /note="GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:133284" misc_feature order(163690..163707,163762..163764,164029..164034, 164038..164040,164143..164151) /locus_tag="Acear_0147" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133284" misc_feature 163789..163821 /locus_tag="Acear_0147" /note="Switch I region; other site" /db_xref="CDD:133284" misc_feature 163807..163809 /locus_tag="Acear_0147" /note="G2 box; other site" /db_xref="CDD:133284" misc_feature 163864..163875 /locus_tag="Acear_0147" /note="G3 box; other site" /db_xref="CDD:133284" misc_feature 163870..163926 /locus_tag="Acear_0147" /note="Switch II region; other site" /db_xref="CDD:133284" misc_feature 164029..164040 /locus_tag="Acear_0147" /note="G4 box; other site" /db_xref="CDD:133284" misc_feature 164143..164151 /locus_tag="Acear_0147" /note="G5 box; other site" /db_xref="CDD:133284" misc_feature 164269..164529 /locus_tag="Acear_0147" /note="EFTU_II: Elongation factor Tu domain II. Elongation factors Tu (EF-Tu) are three-domain GTPases with an essential function in the elongation phase of mRNA translation. The GTPase center of EF-Tu is in the N-terminal domain (domain I), also known as the...; Region: EFTU_II; cd03697" /db_xref="CDD:58088" misc_feature 164536..164805 /locus_tag="Acear_0147" /note="Domain III of elongation factor (EF) Tu. Ef-Tu consists of three structural domains, designated I, II and III. Domain III adopts a beta barrel structure. Domain III is involved in binding to both charged tRNA and binding to elongation factor Ts (EF-Ts)...; Region: EFTU_III; cd03707" /db_xref="CDD:58073" misc_feature order(164572..164574,164578..164586,164638..164640, 164758..164766,164794..164796) /locus_tag="Acear_0147" /note="Antibiotic Binding Site [chemical binding]; other site" /db_xref="CDD:58073" gene 165005..165154 /locus_tag="Acear_0148" /db_xref="GeneID:9512150" CDS 165005..165154 /locus_tag="Acear_0148" /note="InterPro IPR001705; KEGG: hor:Hore_01020 ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: B6G0A7 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L33P" /protein_id="YP_003826764.1" /db_xref="GI:302390944" /db_xref="GeneID:9512150" /translation="MRETITLACTKCNQRNYSTTKNKSNTRDRLEVKKFCKFCGEHTI HKETK" misc_feature 165005..165151 /locus_tag="Acear_0148" /note="Ribosomal protein L33; Region: Ribosomal_L33; cl00383" /db_xref="CDD:193795" gene 165181..165384 /locus_tag="Acear_0149" /db_xref="GeneID:9512151" CDS 165181..165384 /locus_tag="Acear_0149" /note="InterPro IPR001901:IPR005807; KEGG: hor:Hore_01030 preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; SPTR: B8D0B0 Preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial" /codon_start=1 /transl_table=11 /product="preprotein translocase, SecE subunit" /protein_id="YP_003826765.1" /db_xref="GI:302390945" /db_xref="GeneID:9512151" /translation="MAEDSIFGKIKKFFREVKAELKKVNWPNQSVLLSYTTVVIVTVL AVMLFIGGVDLIFSRIITPLILN" misc_feature 165181..165366 /locus_tag="Acear_0149" /note="SecE/Sec61-gamma subunits of protein translocation complex; Region: SecE; cl00481" /db_xref="CDD:193837" gene 165420..165956 /locus_tag="Acear_0150" /db_xref="GeneID:9512152" CDS 165420..165956 /locus_tag="Acear_0150" /note="COGs: COG0250 transcription antiterminator; InterProIPR015869:IPR006645:IPR005824:IPR008991:IPR 001062; KEGG: pth:PTH_0305 transcription antiterminator; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein; SPTR: A5D5K3 transcription antitermination protein nusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG" /codon_start=1 /transl_table=11 /product="transcription antitermination protein nusG" /protein_id="YP_003826766.1" /db_xref="GI:302390946" /db_xref="GeneID:9512152" /translation="MSKKEPEWYAIHTYSGRENKVKSNLEQRIKTIDMEEKIIDILIP SKDEVKVKDEGEKKVSEERFFPGYVLIKMIMDDESWYVVRNTPGVIGFAGASGTKPVP VSDPEVRTIKNEMGLQSQVDIDLEVGDEVRVVDGPFEDFAGEIQEINLDKSKLTVLVS MFGRQTPVELDFDQVEDI" misc_feature 165420..165953 /locus_tag="Acear_0150" /note="transcription antitermination protein NusG; Validated; Region: nusG; PRK05609" /db_xref="CDD:180161" misc_feature 165441..165764 /locus_tag="Acear_0150" /note="Bacterial N-Utilization Substance G (NusG) N-terminal (NGN) domain, subgroup 1; Region: NGN_Bact_1; cd09891" /db_xref="CDD:193580" misc_feature order(165447..165449,165549..165551,165612..165614, 165621..165623,165627..165629,165726..165728, 165750..165752) /locus_tag="Acear_0150" /note="putative homodimer interface [polypeptide binding]; other site" /db_xref="CDD:193580" misc_feature 165798..165890 /locus_tag="Acear_0150" /note="KOW motif; Region: KOW; cl00354" /db_xref="CDD:185933" gene 165971..166402 /locus_tag="Acear_0151" /db_xref="GeneID:9512153" CDS 165971..166402 /locus_tag="Acear_0151" /note="COGs: COG0080 Ribosomal protein L11; InterPro IPR020784:IPR020783:IPR000911:IPR006519; KEGG: hor:Hore_01050 ribosomal protein L11; PFAM: Ribosomal protein L11-like; SMART: ribosomal protein L11; SPTR: B8D0B2 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11" /codon_start=1 /transl_table=11 /product="ribosomal protein L11" /protein_id="YP_003826767.1" /db_xref="GI:302390947" /db_xref="GeneID:9512153" /translation="MAKKVVGEISLQIPAGEANPAPPVGPALGQHGVNIMEFCKAFNA KTADKAGNIIPVEITVYADRSFDFITKSPPAADLLKKAAGIDSGSGEPNINKVGTVTK KDLEEIAKTKMEDLNAANLEAAMRMIAGTARSAGIVVEDEE" misc_feature 165971..166393 /locus_tag="Acear_0151" /note="50S ribosomal protein L11; Validated; Region: rplK; PRK00140" /db_xref="CDD:178895" misc_feature 165995..166387 /locus_tag="Acear_0151" /note="Ribosomal protein L11. Ribosomal protein L11, together with proteins L10 and L7/L12, and 23S rRNA, form the L7/L12 stalk on the surface of the large subunit of the ribosome. The homologous eukaryotic cytoplasmic protein is also called 60S ribosomal...; Region: Ribosomal_L11; cd00349" /db_xref="CDD:100101" misc_feature order(165998..166000,166058..166060,166190..166198, 166208..166210,166229..166231,166304..166306, 166319..166327,166337..166339,166346..166351, 166358..166363,166367..166375) /locus_tag="Acear_0151" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:100101" misc_feature order(165998..166000,166139..166141,166145..166156, 166166..166168,166172..166177,166307..166312, 166319..166324) /locus_tag="Acear_0151" /note="L7/L12 interface [polypeptide binding]; other site" /db_xref="CDD:100101" misc_feature order(166046..166048,166058..166060) /locus_tag="Acear_0151" /note="putative thiostrepton binding site; other site" /db_xref="CDD:100101" misc_feature order(166247..166249,166256..166258) /locus_tag="Acear_0151" /note="L25 interface [polypeptide binding]; other site" /db_xref="CDD:100101" gene 166454..167146 /locus_tag="Acear_0152" /db_xref="GeneID:9512154" CDS 166454..167146 /locus_tag="Acear_0152" /note="COGs: COG0081 Ribosomal protein L1; InterPro IPR002143:IPR016094:IPR005878; KEGG: hor:Hore_01060 ribosomal protein L1; PFAM: ribosomal protein L1; SPTR: B8D0B3 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L1P" /protein_id="YP_003826768.1" /db_xref="GI:302390948" /db_xref="GeneID:9512154" /translation="MSRRYEEVLAEVDRDKVYQPEEALELAKETATANFDETIEIAFK LGIDPGKNDQQLRDALVLPQGTGQEVKVVVFAQGEKAKEAEEAGADVVGSEDLAEKIE EGWLDFDVAIATPDMMSVVGKLGPILGPKGLMPNPKVGTVTFELERAIEDIKAGKIEY RADDGGNVHLPLGKASFEVEELLENLEAVCDEIVRARPSGAKGRYILNMTVSATMGPG IKIDPQFARDMV" misc_feature 166553..167116 /locus_tag="Acear_0152" /note="Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the L1 stalk along with 23S rRNA. In bacteria and archaea, L1 functions both as a ribosomal protein that binds rRNA, and as a translation repressor that...; Region: Ribosomal_L1; cd00403" /db_xref="CDD:88601" misc_feature order(166553..166558,166565..166567,166571..166573, 166577..166579,166583..166585,166946..166948, 166952..166954,166958..166960,167096..167101, 167105..167107) /locus_tag="Acear_0152" /note="mRNA/rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88601" gene 167381..167899 /locus_tag="Acear_0153" /db_xref="GeneID:9512155" CDS 167381..167899 /locus_tag="Acear_0153" /note="COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: hor:Hore_01070 ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: B8D0B4 50S ribosomal protein L10; PFAM: Ribosomal protein L10" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L10P" /protein_id="YP_003826769.1" /db_xref="GI:302390949" /db_xref="GeneID:9512155" /translation="MPTREKEIIVEELTDKFSNAKSAVLTDYCGLDVETMTELRAKLR EAGVDYKVVKNTLARLAAKKAEYDEVDDYLTGPTAIAFSDEDPVAPAKVLADFAEEHE ELEIKAGILQGSLIGQEQLDSLADIPPREELIAQVLRKMKAPVNGLVNALNDPLKSLA HVLNAIKEEKEE" misc_feature 167393..167854 /locus_tag="Acear_0153" /note="Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11...; Region: Ribosomal_L10; cd05797" /db_xref="CDD:88597" misc_feature order(167396..167401,167408..167410,167540..167551, 167558..167560) /locus_tag="Acear_0153" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88597" misc_feature order(167642..167644,167711..167713,167720..167722, 167768..167770,167777..167782,167789..167794, 167798..167815,167819..167827,167834..167839, 167843..167848,167852..167854) /locus_tag="Acear_0153" /note="Interface with L7/L12 ribosomal proteins [polypeptide binding]; other site" /db_xref="CDD:88597" gene 167928..168302 /locus_tag="Acear_0154" /db_xref="GeneID:9512156" CDS 167928..168302 /locus_tag="Acear_0154" /note="COGs: COG0222 Ribosomal protein L7/L12; InterPro IPR013823:IPR014719:IPR008932:IPR000206; KEGG: hor:Hore_01080 ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; SPTR: B8D0B5 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L12P" /protein_id="YP_003826770.1" /db_xref="GI:302390950" /db_xref="GeneID:9512156" /translation="MDKEEIMEAIENMTVLELAELVEELEEKFDVSAAAPVAMAGAPA AGGDAGDEEEQTAFDVEITSGGDKKIKVIKAVREVTDLGLKDAKALVDEAPNTVKEGL EKEEAEEIKEQLEEAGATVELK" misc_feature 167928..>168221 /locus_tag="Acear_0154" /note="Ribosomal protein L7/L12. Ribosomal protein L7/L12 refers to the large ribosomal subunit proteins L7 and L12, which are identical except that L7 is acetylated at the N terminus. It is a component of the L7/L12 stalk, which is located at the surface of...; Region: Ribosomal_L7_L12; cd00387" /db_xref="CDD:100102" misc_feature order(167928..167930,167967..167975,167982..167987, 167994..167996,168003..168005,168048..168050, 168057..168062,168066..168074,168093..168098, 168159..168161,168165..168170,168174..168176, 168180..168185) /locus_tag="Acear_0154" /note="core dimer interface [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature order(167937..167939,167946..167948,167958..167960, 167997..167999,168012..168014) /locus_tag="Acear_0154" /note="peripheral dimer interface [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature order(167979..167981,167988..167993,168003..168005, 168012..168014) /locus_tag="Acear_0154" /note="L10 interface [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature order(168132..168137,168144..168149,168156..168158, 168177..168182,168189..168191) /locus_tag="Acear_0154" /note="L11 interface [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature order(168135..168137,168147..168149,168156..168158, 168177..168182,168189..168191) /locus_tag="Acear_0154" /note="putative EF-Tu interaction site [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature order(168135..168137,168144..168149,168156..168158) /locus_tag="Acear_0154" /note="putative EF-G interaction site [polypeptide binding]; other site" /db_xref="CDD:100102" gene 168653..171904 /locus_tag="Acear_0155" /db_xref="GeneID:9512157" CDS 168653..171904 /locus_tag="Acear_0155" /EC_number="2.7.7.6" /note="COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterProIPR007121:IPR007644:IPR007642:IPR007645:IPR 019462:IPR007120:IPR007641:IPR010243; KEGG: hor:Hore_01090 DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; PRIAM: DNA-directed RNA polymerase; SPTR: B8D0B6 DNA-directed RNA polymerase; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit beta" /protein_id="YP_003826771.1" /db_xref="GI:302390951" /db_xref="GeneID:9512157" /translation="MAKPESSLRRKRRSFAKVEDGMEVPYLLETQKSSYQWFFDNGIL EMFDEISPIQDFSENLVLEFLDYSLGEPKYDEVESKHRDVTYDAPLEVKVRLINQETG EVKEQEVFMGDLPLMTDKGTFIINGAERVIVNQLIRSAGVYFGEERTKDGRQLIDGSI IPNRGAWIEFEYDKKRIIAVRVDRARKMPSTVLFRALGYSTDSELIDLLGDHEIVHDT IDRDNTENREEALIELYKKLRPGEPPTVESAENLIESLFFDPKRYDLAEVGRYKLNNK LGLDTDLDQRTLQKEDIVETVKYLIKLIHDDDDAYIDDIDHLGNRRLKTVGELLQNQF RIGLSRMERVIRERMTIQDIDVITPQALINTRPVVAAIKEFFGSGQLSQFMDQTNPLS ELTHKRRMSALGPGGLSRERAGFDVRDVHHTHYGRICPIETPEGPNIGLIGSLCLYGK TNKYGFIMTPYRKVEDGQVTGKIEYLTANDEEGNVITQGNVSLDDEGNILDERPRARY REDILEVTRDKIDYVDVSPGQIVSVSAALIPFLENDDANRALMGANMQRQGVPLLKTD APYVGTGIEYKAAKDSGVAVVAKNSGEVMRVTAKKILVKTDDGDVDKYELDKFVRSNQ GTSFTHKPIVRKGDRVEAGDVIGDGPAMDQGELALGRNCLVAFMTWEGYNYEDAILIS EKLVKDDSLTSVHIEEHEAEARDTKLGPEEITKDIPNVSEEALKDLDERGIIRPGAEV RPGDILVGKVTPKGETELSAEERLLRAIFGEKAREVRDTSLKVPHGEKGIVIDVKVFT RDDGDDLKPGVNKLVRVYIARKGKIEVGDKLAGRHGNKGVISRVLPEEDMPYLPNGEP VEIVLNPLGVPSRMNLGQVLETHLGWAAEELGIHVETPVFNGATEDDVMDMLEEAGLP RDGKVQLYDGRTGEEFKERVTVGYMYILKLHHLADDKIHARSTGPYSLVTQQPLGGKA QFGGQRLGEMEVWALEAYGAAHCLQEMLTVKSDDVVGRVEAYESIVKGENIPESGIPE SFKVLIKEMQSIGLDAKVYSDEDEELEIEENEEAVNDTTKKLGLDLDEDEDGQ" misc_feature 168653..171805 /locus_tag="Acear_0155" /note="DNA-directed RNA polymerase subunit beta; Reviewed; Region: rpoB; PRK00405" /db_xref="CDD:179007" misc_feature 168731..171799 /locus_tag="Acear_0155" /note="RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase...; Region: RNA_pol_B_RPB2; cd00653" /db_xref="CDD:73223" misc_feature order(168896..168898,170726..170728,170837..170839, 170843..170845,170855..170863,170867..170869) /locus_tag="Acear_0155" /note="RPB12 interaction site [polypeptide binding]; other site" /db_xref="CDD:73223" misc_feature order(169898..169900,169904..169912,169916..169918, 169925..169927,169940..169942,170222..170224, 170276..170284,170288..170290,170651..170662, 170669..170671,170675..170683,171158..171160, 171164..171166,171170..171172,171236..171238, 171242..171244,171251..171253,171260..171262, 171275..171277,171287..171289,171338..171340, 171419..171421,171443..171451,171455..171457, 171494..171496,171503..171511,171515..171520, 171581..171589,171599..171601,171605..171610, 171614..171616,171620..171637,171641..171658, 171668..171670,171737..171739,171749..171751, 171755..171757,171761..171766,171770..171772, 171776..171787,171791..171793,171797..171799) /locus_tag="Acear_0155" /note="RPB1 interaction site [polypeptide binding]; other site" /db_xref="CDD:73223" misc_feature order(170540..170545,170636..170638,170642..170644, 170705..170707,170714..170716,171185..171187, 171224..171226,171305..171310,171314..171316, 171407..171409,171458..171460) /locus_tag="Acear_0155" /note="RPB10 interaction site [polypeptide binding]; other site" /db_xref="CDD:73223" misc_feature order(170669..170671,170711..170713,171182..171184, 171425..171427) /locus_tag="Acear_0155" /note="RPB11 interaction site [polypeptide binding]; other site" /db_xref="CDD:73223" misc_feature order(170711..170716,170726..170728,171104..171106, 171110..171112,171185..171193,171200..171202, 171206..171211,171422..171445,171449..171451) /locus_tag="Acear_0155" /note="RPB3 interaction site [polypeptide binding]; other site" /db_xref="CDD:73223" gene 171956..175432 /locus_tag="Acear_0156" /db_xref="GeneID:9512158" CDS 171956..175432 /locus_tag="Acear_0156" /EC_number="2.7.7.6" /note="COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; InterProIPR007080:IPR000722:IPR007066:IPR007083:IPR 007081:IPR006592:IPR012754; KEGG: hor:Hore_01100 DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; SMART: RNA polymerase I subunit A domain protein; SPTR: B8D0B7 DNA-directed RNA polymerase; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit beta'" /protein_id="YP_003826772.1" /db_xref="GI:302390952" /db_xref="GeneID:9512158" /translation="MLNVNNFDSMKIGLASPEQIRNWSSGEVKKPETINYRTLKPEKE GLFCEKIFGPTKDWECHCGKYKRVRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVS HIWYFKGIPSRLGLVMDMSPRSLEKALYFVSYIVIEPGDTPLSEKQLLSEDEYREAKI KYGDSFKAGMGAEAVKEILKNMDLDKEVEELRAEIKDISGQRRKRAVRRLKVVDGLRK SDNKPEWMVLDVIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGA PDIIIRNEKRMLQEAVDALIDNGRRGRAVTGSGNRPLKSLSDMLKGKQGRFRQNLLGK RVDYSGRSVIVVGPDLKMHECGLPKKMALELFKPFVMKKLVEEDLAHNIKSAKGKVEK LDEEVWDILEEVIKEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKIHPLICPPYNADF DGDQMAVHVPLSAEAQAESRLLMLSTYNLLSPADGEAIAVPSQDMVLGAYHMTMKEEG VKGEGKFFGDVDEVLKAYENDVVDIHAEIKYKLEEEWIETTVGRVLFNDIFPEELEFQ NEVFDKGRLSDLVGNCHDKFGPNQTADLLDDLEEITFEYSTKSGITIGVTDVRVPEEK PEILQKSEDKVHQIEEQYKRGLITEKERYQRVIDIWGTAKDRVTEEMVDGLPETNSIY MMATSGARGNTSQITQLGGMRGLMTDPSGQIIDLPIKANFREGLTVLEYFISTHGARK GLADTALRTADSGYLTRRLVDVSQDVIVREEECGTDDGILVEAIKEEGEVIEPLEERI VGRLANTDIEHPETGETIVEKDEMITEDTAAEIAEAGLEEVEIRSILTCRTKNGVCCK CYGENLATGRLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVEEL FEARTPKGQAIVTELSGKIKLVETANSHKAVIKTDDGKQKTYKLPYGSTMKIEDGDYV ETGQRLTKGPLDPEDILNIRGARAVQKYLLREVQDVYRSQGVEIDDKHMEVVIRQMLD KVKVKEAGDTDLLPGKLVNVFEFEETNNEAITEGKEPATAEPELLGITKASLATESFL SAASFQETTRVLTESSLDGQNDSLVGLKENVIIGQLIPAGTGMKRYRDIDIDITEEED QKDEIAEVEKVK" misc_feature 171956..175360 /locus_tag="Acear_0156" /note="DNA-directed RNA polymerase subunit beta'; Provisional; Region: PRK00566" /db_xref="CDD:179068" misc_feature 171968..172948 /locus_tag="Acear_0156" /note="RNA polymerase Rpb1, domain 1; Region: RNA_pol_Rpb1_1; pfam04997" /db_xref="CDD:147265" misc_feature 172625..173455 /locus_tag="Acear_0156" /note="RNA polymerase Rpb1, domain 2; Region: RNA_pol_Rpb1_2; cl11591" /db_xref="CDD:196263" misc_feature 173387..173809 /locus_tag="Acear_0156" /note="RNA polymerase Rpb1, domain 3; Region: RNA_pol_Rpb1_3; pfam04983" /db_xref="CDD:147253" misc_feature 173894..174124 /locus_tag="Acear_0156" /note="RNA polymerase Rpb1, domain 4; Region: RNA_pol_Rpb1_4; pfam05000" /db_xref="CDD:147268" misc_feature 174551..>174715 /locus_tag="Acear_0156" /note="Largest subunit (beta') of Bacterial DNA-dependent RNA polymerase (RNAP), C-terminal domain; Region: RNAP_beta'_C; cd02655" /db_xref="CDD:132721" misc_feature order(174551..174553,174560..174565,174569..174571) /locus_tag="Acear_0156" /note="Rpb1 (beta') - Rpb6 (omega) interaction site [polypeptide binding]; other site" /db_xref="CDD:132721" misc_feature 174626..174652 /locus_tag="Acear_0156" /note="G-loop; other site" /db_xref="CDD:132721" misc_feature <174899..175348 /locus_tag="Acear_0156" /note="Largest subunit (beta') of Bacterial DNA-dependent RNA polymerase (RNAP), C-terminal domain; Region: RNAP_beta'_C; cd02655" /db_xref="CDD:132721" misc_feature order(175190..175192,175235..175240) /locus_tag="Acear_0156" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:132721" misc_feature order(175280..175282,175298..175300,175316..175318, 175325..175330,175340..175342) /locus_tag="Acear_0156" /note="Rpb1 (beta') - Rpb2 (beta) interaction site [polypeptide binding]; other site" /db_xref="CDD:132721" gene 175640..176008 /locus_tag="Acear_0157" /db_xref="GeneID:9512159" CDS 175640..176008 /locus_tag="Acear_0157" /note="COGs: COG0048 Ribosomal protein S12; InterPro IPR006032:IPR012340:IPR016027:IPR005679; KEGG: hor:Hore_01120 ribosomal protein S12; PFAM: ribosomal protein S12/S23; SPTR: B8D0B9 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S12P" /protein_id="YP_003826773.1" /db_xref="GI:302390953" /db_xref="GeneID:9512159" /translation="MPTINQLIRKGRNKVKKKQTAPALEGAPQKRGVCTRVYTATPKK PNSALRKVARVRLTNGKEVTAYIPGEGHNLQEHSVVLVRGGRVKDLPGVRYTIVRGAL DTAGVEDRKQARSKYGVKKP" misc_feature 175646..175969 /locus_tag="Acear_0157" /note="S12-like family, 30S ribosomal protein S12 subfamily; S12 is located at the interface of the large and small ribosomal subunits of prokaryotes, chloroplasts and mitochondria, where it plays an important role in both tRNA and ribosomal subunit...; Region: Ribosomal_S12; cd03368" /db_xref="CDD:48341" misc_feature order(175649..175654,175658..175663,175670..175675) /locus_tag="Acear_0157" /note="S17 interaction site [polypeptide binding]; other site" /db_xref="CDD:48341" misc_feature 175649..175651 /locus_tag="Acear_0157" /note="S8 interaction site; other site" /db_xref="CDD:48341" misc_feature order(175673..175681,175715..175717,175721..175726, 175730..175732,175775..175780,175784..175792, 175811..175813,175835..175837,175844..175849, 175886..175891,175901..175906,175967..175969) /locus_tag="Acear_0157" /note="16S rRNA interaction site [nucleotide binding]; other site" /db_xref="CDD:48341" misc_feature order(175766..175771,175901..175903) /locus_tag="Acear_0157" /note="streptomycin interaction site [chemical binding]; other site" /db_xref="CDD:48341" misc_feature 175769..175774 /locus_tag="Acear_0157" /note="23S rRNA interaction site [nucleotide binding]; other site" /db_xref="CDD:48341" misc_feature order(175772..175789,175847..175873) /locus_tag="Acear_0157" /note="aminoacyl-tRNA interaction site (A-site) [nucleotide binding]; other site" /db_xref="CDD:48341" gene 176046..176516 /locus_tag="Acear_0158" /db_xref="GeneID:9512160" CDS 176046..176516 /locus_tag="Acear_0158" /note="COGs: COG0049 Ribosomal protein S7; InterPro IPR000235:IPR005717; KEGG: hor:Hore_01130 ribosomal protein S7; PFAM: ribosomal protein S7; SPTR: B8D0C0 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle" /codon_start=1 /transl_table=11 /product="ribosomal protein S7" /protein_id="YP_003826774.1" /db_xref="GI:302390954" /db_xref="GeneID:9512160" /translation="MSRKNIAGRKDITPDPVFNSRLVTKAINKVMYDGKKSLAEKIFY KAMAVIEKNTGENALEVFKEALNNVMPVLEIKSRRVGGANYQVPVEVDNDRRLTLGLR WLIEAARSRGERRMVARLANEIIDAYNEEGGAVRKKEEIHQMAEANKAFAHYRW" misc_feature 176046..176513 /locus_tag="Acear_0158" /note="Ribosomal protein S7p/S5e; Region: Ribosomal_S7; cl00313" /db_xref="CDD:193762" gene 176556..178625 /locus_tag="Acear_0159" /db_xref="GeneID:9512161" CDS 176556..178625 /locus_tag="Acear_0159" /note="COGs: COG0480 translation elongation factors (GTPase); InterProIPR000795:IPR004161:IPR005517:IPR000640:IPR 014721:IPR020568:IPR009000:IPR009022:IPR004540:IPR005225; KEGG: hor:Hore_01140 translation elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; SPTR: B8D0C1 Elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain" /codon_start=1 /transl_table=11 /product="translation elongation factor 2 (EF-2/EF-G)" /protein_id="YP_003826775.1" /db_xref="GI:302390955" /db_xref="GeneID:9512161" /translation="MARQFPLKKTRNIGIMAHIDAGKTTATERILFYTGRVHKMGETH DGASQMDWMDQEQERGITITSAATTCQWRDHRINIIDTPGHVDFTVEVERSLRVLDGA IGVFCSVGGVEPQSETVWRQADRYNVPRFAFVNKMDRTGADFYNVVDMMEERIDANPV PIQLPIGKEDDFIGVVDLVKMKAIVYRDELGVDYEEEEIPEDLQEQAELYREELLEAI ADVDEEIMMKYLEDEEITEDEIRDGIRQGVIENEFTPVMCGTALKNKGIQPMLDAVVD YLPSPVDIPPIEGEVPGTEETEARPADDDEPFSALAFKIMTDPYVGKLAFFRAYSGIL ESGSYVYNSTKEEKERVSRILQMHANHREERDQVYAGDLAAAVGLKNTSTGDTLCDED NPIILESMEFPEPVIAVAIEPKTQADQDKLGQALQSLAEEDPTFQVKTDEETGQTIIS GMGELHLEVIVDRLTREFNVEANIGAPQVAYRETIKEEVEAEGKFIRQSGGRGQYGHA VIEIEPLEAGGGFEFEDNIVGGVIPRDYIPAVEDGVKEAMENGILAGYPMVDIKVSLN DGSHHEVDSSEMAYKVAGSKAFRQGTKRANPVLLEPIMEVEVTTPEEYMGDVIGDLNG RRAQVEGMEQRGNAKVIKAYVPLAEMFGYATDLRSKTQGRANYVMQFDHYGEVPNSIA KEIMDKE" misc_feature 176556..178619 /locus_tag="Acear_0159" /note="elongation factor G; Reviewed; Region: PRK00007" /db_xref="CDD:178789" misc_feature 176589..177398 /locus_tag="Acear_0159" /note="Elongation factor G (EF-G) subfamily. Translocation is mediated by EF-G (also called translocase). The structure of EF-G closely resembles that of the complex between EF-Tu and tRNA. This is an example of molecular mimicry; a protein domain evolved...; Region: EF-G; cd01886" /db_xref="CDD:133286" misc_feature 176604..176627 /locus_tag="Acear_0159" /note="G1 box; other site" /db_xref="CDD:133286" misc_feature order(176607..176609,176613..176615,176625..176630, 176637..176639,176646..176651,176751..176756, 176808..176813,176880..176885,176991..176993, 177003..177005) /locus_tag="Acear_0159" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:133286" misc_feature order(176613..176615,176619..176630,176958..176963, 176967..176969,177333..177341) /locus_tag="Acear_0159" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133286" misc_feature 176694..176753 /locus_tag="Acear_0159" /note="Switch I region; other site" /db_xref="CDD:133286" misc_feature 176739..176741 /locus_tag="Acear_0159" /note="G2 box; other site" /db_xref="CDD:133286" misc_feature 176796..176807 /locus_tag="Acear_0159" /note="G3 box; other site" /db_xref="CDD:133286" misc_feature 176802..176858 /locus_tag="Acear_0159" /note="Switch II region; other site" /db_xref="CDD:133286" misc_feature 176958..176969 /locus_tag="Acear_0159" /note="G4 box; other site" /db_xref="CDD:133286" misc_feature 177333..177341 /locus_tag="Acear_0159" /note="G5 box; other site" /db_xref="CDD:133286" misc_feature 177477..177725 /locus_tag="Acear_0159" /note="EFG_mtEFG_II: this subfamily represents the domain II of elongation factor G (EF-G) in bacteria and, the C-terminus of mitochondrial Elongation factor G1 (mtEFG1) and G2 (mtEFG2)_like proteins found in eukaryotes. During the process of peptide...; Region: EFG_mtEFG_II; cd04088" /db_xref="CDD:58095" misc_feature 177996..178343 /locus_tag="Acear_0159" /note="EFG_mtEFG1_IV: domains similar to domain IV of the bacterial translational elongation factor (EF) EF-G. Included in this group is a domain of mitochondrial Elongation factor G1 (mtEFG1) proteins homologous to domain IV of EF-G. Eukaryotic cells harbor...; Region: EFG_mtEFG1_IV; cd01434" /db_xref="CDD:58274" misc_feature 178356..178589 /locus_tag="Acear_0159" /note="EFG_mtEFG_C: domains similar to the C-terminal domain of the bacterial translational elongation factor (EF) EF-G. Included in this group is the C-terminus of mitochondrial Elongation factor G1 (mtEFG1) and G2 (mtEFG2) proteins. Eukaryotic cells harbor...; Region: EFG_mtEFG_C; cd03713" /db_xref="CDD:58065" gene 178653..179849 /locus_tag="Acear_0160" /db_xref="GeneID:9512162" CDS 178653..179849 /locus_tag="Acear_0160" /note="COGs: COG0050 GTPase - translation elongation factors; InterProIPR000795:IPR004161:IPR004160:IPR009001:IPR 009000:IPR004541:IPR005225; KEGG: hor:Hore_01150 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; SPTR: B8D0A8 Elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU" /codon_start=1 /transl_table=11 /product="translation elongation factor 1A (EF-1A/EF-Tu)" /protein_id="YP_003826776.1" /db_xref="GI:302390956" /db_xref="GeneID:9512162" /translation="MAKEKFERDKPHMNIGTIGHVDHGKTTTTAAITKVLSKGEEGSA NFEDIDNAPEEQERGITIATSHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAL LVVSAADGPMPQTREHLLLARQVNVPNIVVFLNKADMVDDEELIELVEMEVRELLNEY DFNGDEVPIIVGSGLKALECGCGDRDCEWCGQILELMDAIDEYLPEPERDTDKPFLLP VEDVFTIKGRGTVATGRLERGKLHPGDEAELVGVKDTQETVVTGVEMFRKMLDEAVAG DNIGALLRGVDREEIERGQVLAEPGSITPHTEFEAEVYVLSKDEGGRHTPFFDGYRPQ FYFRTTDVTGDINLPDDVEMVMPGDNVEMGVKLITPIAMEEGLRFAIREGGKTVGAGV ITEIIE" misc_feature 178653..179846 /locus_tag="Acear_0160" /note="elongation factor Tu; Reviewed; Region: PRK00049" /db_xref="CDD:178823" misc_feature 178683..179273 /locus_tag="Acear_0160" /note="EF-Tu subfamily. This subfamily includes orthologs of translation elongation factor EF-Tu in bacteria, mitochondria, and chloroplasts. It is one of several GTP-binding translation factors found in the larger family of GTP-binding elongation factors; Region: EF_Tu; cd01884" /db_xref="CDD:133284" misc_feature 178707..178730 /locus_tag="Acear_0160" /note="G1 box; other site" /db_xref="CDD:133284" misc_feature order(178710..178712,178716..178718,178728..178733, 178740..178742,178749..178754,178845..178850, 178902..178907,178974..178979,178983..178994, 179001..179003,179094..179096,179106..179108, 179184..179189) /locus_tag="Acear_0160" /note="GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:133284" misc_feature order(178716..178733,178788..178790,179055..179060, 179064..179066,179169..179177) /locus_tag="Acear_0160" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133284" misc_feature 178815..178847 /locus_tag="Acear_0160" /note="Switch I region; other site" /db_xref="CDD:133284" misc_feature 178833..178835 /locus_tag="Acear_0160" /note="G2 box; other site" /db_xref="CDD:133284" misc_feature 178890..178901 /locus_tag="Acear_0160" /note="G3 box; other site" /db_xref="CDD:133284" misc_feature 178896..178952 /locus_tag="Acear_0160" /note="Switch II region; other site" /db_xref="CDD:133284" misc_feature 179055..179066 /locus_tag="Acear_0160" /note="G4 box; other site" /db_xref="CDD:133284" misc_feature 179169..179177 /locus_tag="Acear_0160" /note="G5 box; other site" /db_xref="CDD:133284" misc_feature 179295..179555 /locus_tag="Acear_0160" /note="EFTU_II: Elongation factor Tu domain II. Elongation factors Tu (EF-Tu) are three-domain GTPases with an essential function in the elongation phase of mRNA translation. The GTPase center of EF-Tu is in the N-terminal domain (domain I), also known as the...; Region: EFTU_II; cd03697" /db_xref="CDD:58088" misc_feature 179562..179831 /locus_tag="Acear_0160" /note="Domain III of elongation factor (EF) Tu. Ef-Tu consists of three structural domains, designated I, II and III. Domain III adopts a beta barrel structure. Domain III is involved in binding to both charged tRNA and binding to elongation factor Ts (EF-Ts)...; Region: EFTU_III; cd03707" /db_xref="CDD:58073" misc_feature order(179598..179600,179604..179612,179664..179666, 179784..179792,179820..179822) /locus_tag="Acear_0160" /note="Antibiotic Binding Site [chemical binding]; other site" /db_xref="CDD:58073" gene 179935..180252 /locus_tag="Acear_0161" /db_xref="GeneID:9512163" CDS 179935..180252 /locus_tag="Acear_0161" /note="COGs: COG0051 Ribosomal protein S10; InterPro IPR018268:IPR001848:IPR005731; KEGG: hor:Hore_01160 ribosomal protein S10; PFAM: ribosomal protein S10; SPTR: B8D0C3 Ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10(archaeal)/S20(eukaryotic); ribosomal protein S10, bacterial/organelle" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S10P" /protein_id="YP_003826777.1" /db_xref="GI:302390957" /db_xref="GeneID:9512163" /translation="MANQAQEKIRIRLKAYEHQVLDKSATKIVETAKRTGAEVSGPVP LPTKKEVFTVLRSPHVHKKAREQFEMRTHKRLIDILEPTSKTVDSLMRLDLPAGVDIE IKL" misc_feature 179947..180249 /locus_tag="Acear_0161" /note="Ribosomal protein S10p/S20e; Region: Ribosomal_S10; cl00314" /db_xref="CDD:193763" gene 180308..180937 /locus_tag="Acear_0162" /db_xref="GeneID:9512164" CDS 180308..180937 /locus_tag="Acear_0162" /note="COGs: COG0087 Ribosomal protein L3; InterPro IPR019926:IPR000597:IPR009000:IPR019927; KEGG: tte:TTE2293 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: Q8R7V4 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L3P" /protein_id="YP_003826778.1" /db_xref="GI:302390958" /db_xref="GeneID:9512164" /translation="MTREILGKKVGMTQIFDDEGEVIPVTVIEAGPCSIVQKKTEEKD GYKAIQLGFGEAKESKLNKPLKGHFDKYGVEPKEYIREVRINEEDEYEVGDEIKADIF AVGDRVDVTGTSKGKGFAGTVKRWNFNLGPKTHGSRNYRLPGSIGASADPARVFKGKK MPGRMGREQVTIQNLKVAKVDPEKNILAVKGAVPGPKKALVRIKESVKG" misc_feature 180308..180934 /locus_tag="Acear_0162" /note="Ribosomal protein L3; Region: Ribosomal_L3; cl00324" /db_xref="CDD:189082" gene 180962..181591 /locus_tag="Acear_0163" /db_xref="GeneID:9512165" CDS 180962..181591 /locus_tag="Acear_0163" /note="COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: hor:Hore_01180 ribosomal protein L4/L1e; PFAM: ribosomal protein L4/L1e; SPTR: B8D0C5 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L4P" /protein_id="YP_003826779.1" /db_xref="GI:302390959" /db_xref="GeneID:9512165" /translation="MPELTLFDAEGSQVGEVELNQSIFDVEINEHVVHEAVTAQLAAK RAGTASTKTRAEVRGGGRKPWRQKGTGRARHGSIRSPIWVGGGTTFGPQPRDYSKDIP KKVKRLAVKSALTAKVQDEELTVVDGFNFDQPKTKQMVKVLEALDAKDKKVLVITAEK DDNLYKSARNIPDVKVLLGSAVNVYDVLDNEQIIITKEAIKKVEEVLDK" misc_feature 180965..181582 /locus_tag="Acear_0163" /note="Ribosomal protein L4/L1 family; Region: Ribosomal_L4; cl00325" /db_xref="CDD:197406" gene 181591..181881 /locus_tag="Acear_0164" /db_xref="GeneID:9512166" CDS 181591..181881 /locus_tag="Acear_0164" /note="COGs: COG0089 Ribosomal protein L23; InterPro IPR013025:IPR012677:IPR012678; KEGG: hor:Hore_01190 ribosomal protein L25/L23; PFAM: Ribosomal protein L25/L23; SPTR: B8D0C6 Ribosomal protein L25/L23; PFAM: Ribosomal protein L23" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L23P" /protein_id="YP_003826780.1" /db_xref="GI:302390960" /db_xref="GeneID:9512166" /translation="MRDPEDVVIQPHISERAMQDIEEENWYTFKVIMNANKPEIKRAI EELFEVKVNKVTTCRMPSKKRRMGVHEGTRPEWKKARVKLAEGDRIEIFEGM" misc_feature 181606..181878 /locus_tag="Acear_0164" /note="Ribosomal protein L23; Region: Ribosomal_L23; cl00326" /db_xref="CDD:185908" gene 181909..182745 /locus_tag="Acear_0165" /db_xref="GeneID:9512167" CDS 181909..182745 /locus_tag="Acear_0165" /note="COGs: COG0090 Ribosomal protein L2; InterProIPR002171:IPR012340:IPR014722:IPR008991:IPR 016027:IPR005880; KEGG: hor:Hore_01200 ribosomal protein L2; PFAM: ribosomal protein L2; SPTR: B8D0C7 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: Ribosomal proteins L2, RNA binding domain; Ribosomal proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L2P" /protein_id="YP_003826781.1" /db_xref="GI:302390961" /db_xref="GeneID:9512167" /translation="MAIKTFKPTSPSRRYMTVDTFEEVTTDESEKSLLAPLKKSGGRN VNGRITSRRRGGGHKRKYRIIDFKRDKDGVPAKVATIEYDPNRSAYIALLNYADGEKR YILAPRGIEVGEKIMSGPEAEIKPGNALQMKDMPVGTIIHNLELQPGKGGQLVRSAGA QARLMAKEEQYVHVNLPSGEVRLIPAECKATVGQVGNIEHENITLGKAGRSRWLGRRP SVRGVVMNPHDHPHGGGEGRKPAGRHPVTPWGQRTIGKKTRKSKKSDELIIRRRNEEK QE" misc_feature 181909..182727 /locus_tag="Acear_0165" /note="50S ribosomal protein L2; Validated; Region: rplB; PRK09374" /db_xref="CDD:181807" misc_feature 182032..182262 /locus_tag="Acear_0165" /note="Ribosomal Proteins L2, RNA binding domain; Region: Ribosomal_L2; pfam00181" /db_xref="CDD:109247" misc_feature 182278..182661 /locus_tag="Acear_0165" /note="Ribosomal Proteins L2, C-terminal domain; Region: Ribosomal_L2_C; pfam03947" /db_xref="CDD:146530" gene 182776..183060 /locus_tag="Acear_0166" /db_xref="GeneID:9512168" CDS 182776..183060 /locus_tag="Acear_0166" /note="COGs: COG0185 Ribosomal protein S19; InterPro IPR002222:IPR005732; KEGG: hor:Hore_01210 ribosomal protein S19; PFAM: ribosomal protein S19/S15; SPTR: B8D0C8 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S19P" /protein_id="YP_003826782.1" /db_xref="GI:302390962" /db_xref="GeneID:9512168" /translation="MGRSVKKGPFVEKKLLDKIEELNESGEKEVIKTWSRDSTVFPQM VGHTIAVYDGRKHVPIYITEEMVGHKLGEFAPTRTFREHSRHTERSTSLK" misc_feature 182776..183027 /locus_tag="Acear_0166" /note="Ribosomal protein S19; Region: Ribosomal_S19; cl00350" /db_xref="CDD:185929" gene 183092..183433 /locus_tag="Acear_0167" /db_xref="GeneID:9512169" CDS 183092..183433 /locus_tag="Acear_0167" /note="COGs: COG0091 Ribosomal protein L22; InterPro IPR018260:IPR001063:IPR005727; KEGG: hor:Hore_01220 ribosomal protein L22; PFAM: ribosomal protein L22/L17; SPTR: B8D0C9 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L22P" /protein_id="YP_003826783.1" /db_xref="GI:302390963" /db_xref="GeneID:9512169" /translation="MEAKATAKEVRISPRKARLVIDLVRDKEIGKAFGILRNTPKKAA EIIEKVLNSAVANAENNHDMIPDELYISEAYVNEGPTMKRFKPRAMGQATPINKRTSH ITIKVKEQKEG" misc_feature 183098..183412 /locus_tag="Acear_0167" /note="Ribosomal protein L22/L17e. L22 (L17 in eukaryotes) is a core protein of the large ribosomal subunit. It is the only ribosomal protein that interacts with all six domains of 23S rRNA, and is one of the proteins important for directing the proper...; Region: Ribosomal_L22; cd00336" /db_xref="CDD:48343" misc_feature order(183098..183103,183167..183175,183179..183184, 183188..183193,183254..183271,183296..183313, 183407..183412) /locus_tag="Acear_0167" /note="putative translocon binding site; other site" /db_xref="CDD:48343" misc_feature order(183107..183109,183113..183115,183122..183124, 183128..183136,183143..183145,183155..183157, 183164..183166,183248..183250,183260..183262, 183269..183271,183308..183310,183314..183322, 183326..183328,183335..183337,183371..183388) /locus_tag="Acear_0167" /note="protein-rRNA interface [nucleotide binding]; other site" /db_xref="CDD:48343" gene 183437..184087 /locus_tag="Acear_0168" /db_xref="GeneID:9512170" CDS 183437..184087 /locus_tag="Acear_0168" /note="COGs: COG0092 Ribosomal protein S3; InterProIPR018280:IPR008282:IPR004044:IPR001351:IPR 015946:IPR009019:IPR004087:IPR005704; KEGG: hor:Hore_01230 ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; SMART: KH domain protein; SPTR: B8D0D0 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S3P" /protein_id="YP_003826784.1" /db_xref="GI:302390964" /db_xref="GeneID:9512170" /translation="MGQKVNPHGLRVGVIKDWDAKWYAEKDEYADVLHEDLEIRNHVK DKMYNAGIARIVIERAADRVKLDVHTARPGMVIGKGGSEVNALRNELQDITGKQIQIN VVEVKNPEKNAQLIAEGVAQQLEQRVSFRRAMRQAMNRTLRQDGIEGFRIECSGRLGG AEMARQEGYNKGNVSLQTLRADIDYGFTEAYTTYGKIGVKVWINKGEILPDVEDEE" misc_feature 183437..184084 /locus_tag="Acear_0168" /note="30S ribosomal protein S3; Reviewed; Region: rpsC; PRK00310" /db_xref="CDD:178972" misc_feature 183440..183763 /locus_tag="Acear_0168" /note="K homology RNA-binding (KH) domain of the prokaryotic 30S small ribosomal subunit protein S3. S3 is part of the head region of the 30S ribosomal subunit and is believed to interact with mRNA as it threads its way from the latch into the channel. The...; Region: 30S_S3_KH; cd02412" /db_xref="CDD:48410" misc_feature 183668..183679 /locus_tag="Acear_0168" /note="G-X-X-G motif; other site" /db_xref="CDD:48410" misc_feature 183794..184045 /locus_tag="Acear_0168" /note="Ribosomal protein S3, C-terminal domain; Region: Ribosomal_S3_C; pfam00189" /db_xref="CDD:189441" gene 184116..184550 /locus_tag="Acear_0169" /db_xref="GeneID:9512171" CDS 184116..184550 /locus_tag="Acear_0169" /note="COGs: COG0197 Ribosomal protein L16/L10E; InterPro IPR020798:IPR016180:IPR000114; KEGG: hor:Hore_01240 ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: B8D0D1 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L16P" /protein_id="YP_003826785.1" /db_xref="GI:302390965" /db_xref="GeneID:9512171" /translation="MLLPKRVKHRKQQRGRMKGKATRGNKVNFGEYGLQALEPAWISN RQIEAARIALTRHAKRGGKVWVNIFPDKPVTATPAETRMGSGKGDPEYWAAVVKPGRI MFEIAGIQEEVAEEAMRLASHKLPIQTRFVKREGMDGDSDES" misc_feature 184182..184511 /locus_tag="Acear_0169" /note="Ribosomal_L16_L10e: L16 is an essential protein in the large ribosomal subunit of bacteria, mitochondria, and chloroplasts. Large subunits that lack L16 are defective in peptidyl transferase activity, peptidyl-tRNA hydrolysis activity, association with...; Region: Ribosomal_L16_L10e; cd01433" /db_xref="CDD:88606" misc_feature order(184182..184184,184188..184193,184200..184202, 184248..184253,184260..184262,184269..184271, 184281..184283,184290..184292,184308..184316, 184320..184322,184326..184328,184338..184343, 184362..184376,184416..184418,184470..184475, 184482..184487) /locus_tag="Acear_0169" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88606" misc_feature 184227..184232 /locus_tag="Acear_0169" /note="5S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88606" misc_feature order(184263..184271,184278..184283) /locus_tag="Acear_0169" /note="putative antibiotic binding site [chemical binding]; other site" /db_xref="CDD:88606" misc_feature order(184290..184292,184299..184304,184308..184310, 184434..184436) /locus_tag="Acear_0169" /note="L25 interface [polypeptide binding]; other site" /db_xref="CDD:88606" misc_feature order(184356..184361,184368..184373) /locus_tag="Acear_0169" /note="L27 interface [polypeptide binding]; other site" /db_xref="CDD:88606" gene 184528..184740 /locus_tag="Acear_0170" /db_xref="GeneID:9512172" CDS 184528..184740 /locus_tag="Acear_0170" /note="COGs: COG0255 Ribosomal protein L29; InterPro IPR018254:IPR001854; KEGG: tpd:Teth39_0382 50S ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: A8W1E3 Ribosomal protein L3; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L29P" /protein_id="YP_003826786.1" /db_xref="GI:302390966" /db_xref="GeneID:9512172" /translation="MVTVMKANELRELTSEELEHKLSDLKEELFNLRFQNATAQLDNP ARIREVRRSIARVKTILHERELEIRH" misc_feature 184549..184719 /locus_tag="Acear_0170" /note="Ribosomal L29 protein/HIP. L29 is a protein of the large ribosomal Subunit. A homolog, called heparin/heparan sulfate interacting protein (HIP), has also been identified in mammals. L29 is located on the surface of the large ribosomal subunit, where...; Region: Ribosomal_L29_HIP; cd00427" /db_xref="CDD:88602" misc_feature order(184549..184551,184558..184560,184660..184662, 184690..184695,184699..184704,184714..184716) /locus_tag="Acear_0170" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88602" misc_feature order(184549..184557,184561..184563,184573..184578, 184582..184587,184594..184599,184606..184611, 184618..184620,184627..184632,184654..184656, 184663..184665,184675..184677,184684..184689, 184696..184701,184708..184710) /locus_tag="Acear_0170" /note="putative translocon interaction site; other site" /db_xref="CDD:88602" misc_feature order(184597..184599,184609..184611,184618..184620, 184630..184632,184675..184677) /locus_tag="Acear_0170" /note="signal recognition particle (SRP54) interaction site; other site" /db_xref="CDD:88602" misc_feature order(184615..184617,184624..184629) /locus_tag="Acear_0170" /note="L23 interface [polypeptide binding]; other site" /db_xref="CDD:88602" misc_feature 184636..184641 /locus_tag="Acear_0170" /note="trigger factor interaction site; other site" /db_xref="CDD:88602" gene 184771..185028 /locus_tag="Acear_0171" /db_xref="GeneID:9512173" CDS 184771..185028 /locus_tag="Acear_0171" /note="COGs: COG0186 Ribosomal protein S17; InterProIPR019979:IPR000266:IPR012340:IPR016027:IPR 019984; KEGG: hor:Hore_01260 ribosomal protein S17; PFAM: ribosomal protein S17; SPTR: A1HQM0 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S17P" /protein_id="YP_003826787.1" /db_xref="GI:302390967" /db_xref="GeneID:9512173" /translation="MSEENNKKTRIGKVVSDKMDKTIVVAVERKTQHDLYKRVINRTT RFKAHDEDNECSEGDKVRIIETRPISKEKNWKVDEILRKAK" misc_feature 184777..185025 /locus_tag="Acear_0171" /note="Ribosomal protein S17; Region: Ribosomal_S17; cl00351" /db_xref="CDD:189087" gene 185071..185439 /locus_tag="Acear_0172" /db_xref="GeneID:9512174" CDS 185071..185439 /locus_tag="Acear_0172" /note="COGs: COG0093 Ribosomal protein L14; InterPro IPR019972:IPR000218:IPR005745; KEGG: hor:Hore_01270 ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; SPTR: B8D0D4 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L14P" /protein_id="YP_003826788.1" /db_xref="GI:302390968" /db_xref="GeneID:9512174" /translation="MIQVESKLNVADNSGARELLCVKILGGSKKKYATIGDIIIGTVK EAIPDGMVSKGEVVKAVVVRTQREYRRPDGSYISFDENAAVIIDNNDNPTGTRIFGPV ARELRDKKFTRIISLAPEVL" misc_feature 185071..185436 /locus_tag="Acear_0172" /note="Ribosomal protein L14p/L23e; Region: Ribosomal_L14; cl00328" /db_xref="CDD:193771" gene 185478..185804 /locus_tag="Acear_0173" /db_xref="GeneID:9512175" CDS 185478..185804 /locus_tag="Acear_0173" /note="COGs: COG0198 Ribosomal protein L24; InterProIPR005825:IPR005824:IPR014723:IPR008991:IPR 003256; KEGG: dae:Dtox_0297 ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW domain protein; SPTR: C1TJR8 50S ribosomal protein L24P; TIGRFAM: ribosomal protein L24; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L24P" /protein_id="YP_003826789.1" /db_xref="GI:302390969" /db_xref="GeneID:9512175" /translation="MALSKLHVKKDDEVMVIAGNDKGKRGKVLKAFPKEERVVVEGIN IRHKHQQPSQDMPQGGIVEKEAPIYSSNVMLICKYCDQPTKTGTEVLDSGEKVRVCKE CGEIID" misc_feature 185490..185801 /locus_tag="Acear_0173" /note="KOW motif; Region: KOW; cl00354" /db_xref="CDD:185933" gene 185844..186383 /locus_tag="Acear_0174" /db_xref="GeneID:9512176" CDS 185844..186383 /locus_tag="Acear_0174" /note="COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: hor:Hore_01290 ribosomal protein L5; PFAM: ribosomal protein L5; SPTR: B8D0D6 50S ribosomal protein L5; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L5P" /protein_id="YP_003826790.1" /db_xref="GI:302390970" /db_xref="GeneID:9512176" /translation="MVVLKEQYKDEIVDKLMDKFEYDNIMQVPELEKIIVNMGIGEAS ENVNLLDDSVEQLKAITGQNPVVTRAKKSIANFKIRKGMPVGCKVTLRGEVMYEFLYK LVNVALPRVRDFRGLSTKSFDGRGNYSLGLDNQTVFPEIDVDDVNKIQGMDITIVTSA ETDEEARELLSLMNMPFKQ" misc_feature 185844..186380 /locus_tag="Acear_0174" /note="50S ribosomal protein L5; Validated; Region: rplE; PRK00010" /db_xref="CDD:178791" misc_feature 185913..186083 /locus_tag="Acear_0174" /note="Ribosomal protein L5; Region: Ribosomal_L5; pfam00281" /db_xref="CDD:109342" misc_feature 186093..186377 /locus_tag="Acear_0174" /note="ribosomal L5P family C-terminus; Region: Ribosomal_L5_C; pfam00673" /db_xref="CDD:144317" gene 186410..186595 /locus_tag="Acear_0175" /db_xref="GeneID:9512177" CDS 186410..186595 /locus_tag="Acear_0175" /note="COGs: COG0199 Ribosomal protein S14; InterPro IPR018271:IPR001209; KEGG: hor:Hore_01300 ribosomal protein S14; PFAM: ribosomal protein S14; SPTR: B8D0D7 30S ribosomal protein S14 type Z; PFAM: Ribosomal protein S14p/S29e" /codon_start=1 /transl_table=11 /product="ribosomal protein S14" /protein_id="YP_003826791.1" /db_xref="GI:302390971" /db_xref="GeneID:9512177" /translation="MARKAKVEKSNKDQKYSTRGVLRCRRCGRANGVLQKFELCRICF RELAHKGVLPGVKKSSW" misc_feature 186410..186592 /locus_tag="Acear_0175" /note="Ribosomal protein S14p/S29e; Region: Ribosomal_S14; cl00355" /db_xref="CDD:193782" gene 186624..187022 /locus_tag="Acear_0176" /db_xref="GeneID:9512178" CDS 186624..187022 /locus_tag="Acear_0176" /note="COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: hor:Hore_01310 ribosomal protein S8; PFAM: ribosomal protein S8; SPTR: B8D0D8 30S ribosomal protein S8; PFAM: Ribosomal protein S8" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S8P" /protein_id="YP_003826792.1" /db_xref="GI:302390972" /db_xref="GeneID:9512178" /translation="MSVTDSIADMLTQTRNANMMVKEKVDIPASNLKEEMARVLEEEG FIKDYKRIETDAQGKIRLYLKYGANKEKVITGLKRISKPGLRVYVDKNEIPQVLGGLG IAILSTSQGVMTDKEARSRGIGGEVLCYVW" misc_feature 186627..187019 /locus_tag="Acear_0176" /note="Ribosomal protein S8; Region: Ribosomal_S8; cl00330" /db_xref="CDD:185911" gene 187064..187600 /locus_tag="Acear_0177" /db_xref="GeneID:9512179" CDS 187064..187600 /locus_tag="Acear_0177" /note="COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR020040:IPR019906:IPR000702; KEGG: hor:Hore_01320 ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: B8D0D9 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L6P" /protein_id="YP_003826793.1" /db_xref="GI:302390973" /db_xref="GeneID:9512179" /translation="MSRIGHLPIEIPDKVDITVDDNVITVKGPNGELSNKIDERLDVT LDEDTITINRTGDSKEDRSIHGLNRSLVVNMVQGVTEGFKKELELNGVGYRVQKKGQN LELQVGYSHPVVIEAQDGIKLEIEGNDKIIVSGADKQKVGEVAANIRSVREPEPYGGK GIKYVDEHIRRKEGKTAG" misc_feature 187064..187597 /locus_tag="Acear_0177" /note="50S ribosomal protein L6; Validated; Region: rplF; PRK05498" /db_xref="CDD:180118" misc_feature 187334..187555 /locus_tag="Acear_0177" /note="Ribosomal protein L6; Region: Ribosomal_L6; pfam00347" /db_xref="CDD:109407" gene 187632..187982 /locus_tag="Acear_0178" /db_xref="GeneID:9512180" CDS 187632..187982 /locus_tag="Acear_0178" /note="COGs: COG0256 Ribosomal protein L18; InterPro IPR005484:IPR004389; KEGG: hor:Hore_01330 ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; SPTR: B8D0E0 Ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L18P" /protein_id="YP_003826794.1" /db_xref="GI:302390974" /db_xref="GeneID:9512180" /translation="MSTSRKKRHQRIRNKISGTPFKPRLSVYRSLKHIYAQLIDDLSG ETLAAASTQDPEIRDEIDNGGNVEAAQMVGELIAERALKEDIKEVVFDRGGNKYHGRV KALAEAARENGLEF" misc_feature 187665..187973 /locus_tag="Acear_0178" /note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA...; Region: Ribosomal_L18_L5e; cd00432" /db_xref="CDD:88603" misc_feature order(187665..187667,187674..187679,187902..187904, 187911..187913,187959..187961) /locus_tag="Acear_0178" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88603" misc_feature 187665..187667 /locus_tag="Acear_0178" /note="L21e interface [polypeptide binding]; other site" /db_xref="CDD:88603" misc_feature order(187671..187673,187677..187682,187686..187688, 187701..187703,187713..187730,187734..187736, 187740..187742,187761..187769,187776..187778, 187899..187901,187932..187934) /locus_tag="Acear_0178" /note="5S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88603" misc_feature order(187671..187673,187680..187685) /locus_tag="Acear_0178" /note="L27 interface [polypeptide binding]; other site" /db_xref="CDD:88603" misc_feature 187917..187919 /locus_tag="Acear_0178" /note="L5 interface [polypeptide binding]; other site" /db_xref="CDD:88603" gene 188001..188513 /locus_tag="Acear_0179" /db_xref="GeneID:9512181" CDS 188001..188513 /locus_tag="Acear_0179" /note="COGs: COG0098 Ribosomal protein S5; InterProIPR013810:IPR005324:IPR014720:IPR014721:IPR 020568:IPR005712; KEGG: hor:Hore_01340 ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein; SPTR: B8D0E1 Ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S5P" /protein_id="YP_003826795.1" /db_xref="GI:302390975" /db_xref="GeneID:9512181" /translation="MAIKKNMIDPDELELDERVVNINRVSKVVKGGRRFSFSSLVIVG DGNGHVGAGIGKANEVPGAIQKGIAAAKKELIEVPLDDTTIPHEVTGVFGAGRVLFKP ASEGTGIIAGGPIRAVVELAGIKDILTKSLGSDNPLNMVNAAIQGLKEIKDVEKVAEL RGKSVEELLN" misc_feature 188010..188510 /locus_tag="Acear_0179" /note="30S ribosomal protein S5; Validated; Region: rpsE; PRK00550" /db_xref="CDD:179061" misc_feature 188040..188240 /locus_tag="Acear_0179" /note="Ribosomal protein S5, N-terminal domain; Region: Ribosomal_S5; pfam00333" /db_xref="CDD:144065" misc_feature 188265..188486 /locus_tag="Acear_0179" /note="Ribosomal protein S5, C-terminal domain; Region: Ribosomal_S5_C; pfam03719" /db_xref="CDD:190724" gene 188554..188994 /locus_tag="Acear_0180" /db_xref="GeneID:9512182" CDS 188554..188994 /locus_tag="Acear_0180" /note="COGs: COG0200 Ribosomal protein L15; InterPro IPR001196:IPR005749; KEGG: afl:Aflv_0124 ribosomal protein L15; PFAM: ribosomal protein L15; SPTR: B7GJ86 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L15P" /protein_id="YP_003826796.1" /db_xref="GI:302390976" /db_xref="GeneID:9512182" /translation="MKLHDLQPAEGSKKKRKRKGRGVGSGSGKTAGRGTKGQNARSGG GVRPGFEGGQTPYFKRFPKYGFTNKFRTEYAEVNVKDLNRFAEGTEVTPEVLVEAGLV SKIKDGVKILGDGELDVELMVKAHGFTKSAAEKIEAAGGEAEVI" misc_feature 188554..188946 /locus_tag="Acear_0180" /note="Ribosomal protein L18e/L15; Region: Ribosomal_L18e; cl12022" /db_xref="CDD:196303" gene 189015..190274 /locus_tag="Acear_0181" /db_xref="GeneID:9512183" CDS 189015..190274 /locus_tag="Acear_0181" /note="COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: hor:Hore_01360 preprotein translocase, SecY subunit; PFAM: SecY protein; SPTR: B8D0S8 Preprotein translocase secY subunit; TIGRFAM: preprotein translocase, SecY subunit; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)" /codon_start=1 /transl_table=11 /product="protein translocase subunit secY/sec61 alpha" /protein_id="YP_003826797.1" /db_xref="GI:302390977" /db_xref="GeneID:9512183" /translation="MLSALTNSLKVKGLREKIFFILAMIAVYRIGAHIPVPGVDPSRL SELFQQGGLLGFLDMFSGGALRRFTIFAMSINPYITASIIMQLLTVVIPRLEELSKQG QEGKKVIAQYTRYATVVLALIQGFGITLWIKNLGAIANPTYFTLFTIIITLTAGTAFL MWLGEQITDKGIGNGISIIIFASVISRAPSAVIGIVRKLQVGAISIFNVFFFLIIAVV IVAAIIYIQQGERKIPVQYSKRVVGRKVYGGQSTHIPLKVNQAGVIPVIFASSVLLFP ATIAKILPYGWAQSLADALSPGSALYTALYALLIIFFTYFYTAIQFNPREVADNIKQN GGFVPGRRPGRPTAEYLDRILTRITLAGAIFLAAVAVLPNFVMSITGIEVRFGGTALL IVIGVALQTMKEIETQLLQRHYQGFME" misc_feature 189015..190268 /locus_tag="Acear_0181" /note="preprotein translocase subunit SecY; Reviewed; Region: secY; PRK09204" /db_xref="CDD:181698" misc_feature 189219..190223 /locus_tag="Acear_0181" /note="SecY translocase; Region: SecY; pfam00344" /db_xref="CDD:189510" gene 190310..190951 /locus_tag="Acear_0182" /db_xref="GeneID:9512184" CDS 190310..190951 /locus_tag="Acear_0182" /EC_number="2.7.4.3" /note="COGs: COG0563 adenylate kinase and related kinase; InterPro IPR000850:IPR007862:IPR006259; KEGG: chy:CHY_1340 adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; SPTR: Q3ACG0 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase, active site lid; adenylate kinase; TIGRFAM: adenylate kinases" /codon_start=1 /transl_table=11 /product="adenylate kinase" /protein_id="YP_003826798.1" /db_xref="GI:302390978" /db_xref="GeneID:9512184" /translation="MHIILVGPPGAGKGTQAARLVDEFGIPHIATGDIFRSAIKNETP LGKKAKEYIDQGQLVPDEVTVGMVENRLAEDDCQEGFILDGFPRTVAQADALKDILTD LGIELDAVLNIEVGEEEVVKRLSARRVCSECGASYHLEFDPPQKENTCDKCSGELYQR DDDEPETIKERLEVYKEKTEPLIDYYQKTGDLKSIDGEAAPKEVFTRIKQELS" misc_feature 190310..190948 /locus_tag="Acear_0182" /note="adenylate kinase; Reviewed; Region: adk; PRK00279" /db_xref="CDD:178957" misc_feature 190313..190921 /locus_tag="Acear_0182" /note="Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (ATP) to adenosine monophosphates (AMP) and to yield adenosine diphosphates (ADP). This enzyme is required for the biosynthesis of ADP and is essential for...; Region: ADK; cd01428" /db_xref="CDD:30189" misc_feature order(190400..190402,190415..190417,190484..190486, 190559..190564,190568..190573,190583..190585) /locus_tag="Acear_0182" /note="AMP-binding site [chemical binding]; other site" /db_xref="CDD:30189" misc_feature order(190415..190417,190559..190561,190571..190573, 190688..190690,190820..190822,190832..190834) /locus_tag="Acear_0182" /note="ATP-AMP (Ap5A)-binding site [chemical binding]; other site" /db_xref="CDD:30189" gene 190951..191697 /locus_tag="Acear_0183" /db_xref="GeneID:9512185" CDS 190951..191697 /locus_tag="Acear_0183" /EC_number="3.4.11.18" /note="COGs: COG0024 methionine aminopeptidase; InterPro IPR002467:IPR000994:IPR001714; KEGG: hor:Hore_01380 methionine aminopeptidase, type I; PFAM: peptidase M24; SPTR: B8D0T0 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I" /codon_start=1 /transl_table=11 /product="methionine aminopeptidase, type I" /protein_id="YP_003826799.1" /db_xref="GI:302390979" /db_xref="GeneID:9512185" /translation="MIVRKSNRELDLMRTPNKIVAETHEFLAEKIAPGITTEEIDRLA EEFIRDYDAEPAFKGYRGFPSTVCVAINEQVVHGIPGPERLKSGDIIGLDLGAVKRGY YGDAARTLAVGDISKQAQKLIEVTKKALELGIEQAVAGNKLSDISHAVQTHAEEAGFS VVRRFVGHGIGTEMHESPQIPNYGPSGQGPTLKPGMTLAIEPMVNVGGYEVETLDDGW TVVTKDRELSAHFENTIAVTDSEPEILTLI" misc_feature 190951..191688 /locus_tag="Acear_0183" /note="methionine aminopeptidase; Reviewed; Region: PRK07281" /db_xref="CDD:180918" misc_feature 190978..191691 /locus_tag="Acear_0183" /note="Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides; Region: MetAP1; cd01086" /db_xref="CDD:29971" misc_feature order(191179..191181,191230..191232,191263..191265, 191452..191454,191551..191553,191644..191646) /locus_tag="Acear_0183" /note="active site" /db_xref="CDD:29971" gene 191766..191987 /locus_tag="Acear_0184" /db_xref="GeneID:9512186" CDS 191766..191987 /locus_tag="Acear_0184" /note="COGs: COG0361 translation initiation factor 1 (IF-1); InterPro IPR006196:IPR012340:IPR016027:IPR004368; KEGG: hor:Hore_01400 translation initiation factor IF-1; PFAM: S1 IF1 family protein; SPTR: B8D0T2 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1" /codon_start=1 /transl_table=11 /product="bacterial translation initiation factor 1 (bIF-1)" /protein_id="YP_003826800.1" /db_xref="GI:302390980" /db_xref="GeneID:9512186" /translation="MSKEDPIEVEGTVVEPLPNAKFRVELDNGHKVLAHVSGKMRMNF IRILPGDKVTVELSPYDLDRGRITYRHKS" misc_feature 191784..191975 /locus_tag="Acear_0184" /note="S1_IF1: Translation Initiation Factor IF1, S1-like RNA-binding domain. IF1 contains an S1-like RNA-binding domain, which is found in a wide variety of RNA-associated proteins. Translation initiation includes a number of interrelated steps preceding the...; Region: S1_IF1; cd04451" /db_xref="CDD:88417" misc_feature order(191808..191816,191832..191834,191868..191870, 191877..191882,191895..191906,191955..191957, 191961..191963) /locus_tag="Acear_0184" /note="rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:88417" misc_feature order(191868..191870,191880..191882,191973..191975) /locus_tag="Acear_0184" /note="predicted 30S ribosome binding site; other site" /db_xref="CDD:88417" gene 192004..192117 /locus_tag="Acear_0185" /db_xref="GeneID:9512187" CDS 192004..192117 /locus_tag="Acear_0185" /note="InterPro IPR000923:IPR000473; KEGG: hor:Hore_01410 ribosomal protein L36; PFAM: ribosomal protein L36; SPTR: B7CEB7 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L36P" /protein_id="YP_003826801.1" /db_xref="GI:302390981" /db_xref="GeneID:9512187" /translation="MKVRPSVKPICDKCKVVRRKGRVYVICENPKHKQRQG" misc_feature 192004..192114 /locus_tag="Acear_0185" /note="Ribosomal protein L36; Region: Ribosomal_L36; cl00380" /db_xref="CDD:185953" gene 192152..192523 /locus_tag="Acear_0186" /db_xref="GeneID:9512188" CDS 192152..192523 /locus_tag="Acear_0186" /note="COGs: COG0099 Ribosomal protein S13; InterPro IPR018269:IPR001892:IPR010979:IPR019980; KEGG: tpd:Teth39_0399 30S ribosomal protein S13; PFAM: ribosomal protein S13; SPTR: C7IUT6 Ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S13P" /protein_id="YP_003826802.1" /db_xref="GI:302390982" /db_xref="GeneID:9512188" /translation="MARIEGVDLPRDKRVEIGLTYIYGIGRSTAQDIIEEAGLDPDTR VRDLTEEEVAKLRRVIDEEYTVEGELRREIRSDIKRLKDIGCYRGIRHKRGLPVRGQR TRTNARTRKGPKQTVGTKRVT" misc_feature 192152..192514 /locus_tag="Acear_0186" /note="Ribosomal protein S13/S18; Region: Ribosomal_S13; cl00331" /db_xref="CDD:185912" misc_feature 192152..192514 /locus_tag="Acear_0186" /note="Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]; Region: RpsM; COG0099" /db_xref="CDD:30448" gene 192562..192942 /locus_tag="Acear_0187" /db_xref="GeneID:9512189" CDS 192562..192942 /locus_tag="Acear_0187" /note="COGs: COG0100 Ribosomal protein S11; InterPro IPR018102:IPR001971:IPR019981; KEGG: pth:PTH_0346 30S ribosomal protein S11; PFAM: ribosomal protein S11; SPTR: A5D5E6 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S11P" /protein_id="YP_003826803.1" /db_xref="GI:302390983" /db_xref="GeneID:9512189" /translation="MARRKNERKAKHVTKGQAHICSTFNNTIVSLTDDKGNVISWSSA GNLGFKGTKKSTPYAAQMAAEDAAKEAMEHGLKKVKVFVKGPGAGREAAVRALQSTGL EIDLIKDVTPIPHNGCRPPKRRRV" misc_feature 192562..192939 /locus_tag="Acear_0187" /note="Ribosomal protein S11; Region: Ribosomal_S11; cl00332" /db_xref="CDD:193772" gene 192979..193605 /locus_tag="Acear_0188" /db_xref="GeneID:9512190" CDS 192979..193605 /locus_tag="Acear_0188" /note="COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR018079:IPR001912:IPR002942:IPR005709; KEGG: hor:Hore_01440 ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; SMART: RNA-binding S4 domain protein; SPTR: B8D0T6 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S4P" /protein_id="YP_003826804.1" /db_xref="GI:302390984" /db_xref="GeneID:9512190" /translation="MARDTKAVCRKCRREGEKLFLKGERCFSDKCAIERRPYAPGEQG NKRQKLSEFGVQLREKQKVRQIYGVSESQFKKYFEMADNKPGITGENFLKILESRLDN IVYRLGFAASRNEARQLVRHGHFLVNGERVDIPSYLVEEGDEVEVKDSSKDMKRMQEI VEFTGQQNIPAWVEANLENKTGKVLKEPEREDIDLPVREQLIVEFYSR" misc_feature 192979..193602 /locus_tag="Acear_0188" /note="30S ribosomal protein S4; Validated; Region: rpsD; PRK05327" /db_xref="CDD:180018" misc_feature 192982..193269 /locus_tag="Acear_0188" /note="Ribosomal protein S4/S9 N-terminal domain; Region: Ribosomal_S4; pfam00163" /db_xref="CDD:143931" misc_feature 193273..193455 /locus_tag="Acear_0188" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cd00165" /db_xref="CDD:29105" misc_feature order(193273..193275,193309..193314,193318..193323, 193327..193332,193339..193344,193348..193350, 193369..193392,193396..193398) /locus_tag="Acear_0188" /note="RNA binding surface [nucleotide binding]; other site" /db_xref="CDD:29105" gene 193723..194667 /locus_tag="Acear_0189" /db_xref="GeneID:9512191" CDS 193723..194667 /locus_tag="Acear_0189" /EC_number="2.7.7.6" /note="COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; InterProIPR011261:IPR011262:IPR011260:IPR009025:IPR 011263:IPR011773; KEGG: hor:Hore_01450 DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; SMART: RNA polymerase RpoA/D/Rpb3-type; SPTR: B8D0T7 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit alpha" /protein_id="YP_003826805.1" /db_xref="GI:302390985" /db_xref="GeneID:9512191" /translation="MIEFEKPAIERIESTDTYGKFAITPLERGYGITLGNSLRRIMLS SLPGTAPTSVKIEGVEHEFSTISGVVEDVTDIVLNLKELVLRMESEEPEILRLNASGE GEVTADEFTVSGNIEILNPDQHIATLSDDGQLDMEVTVENGRGYVSAEENKDDEEHVI GVIPMDSSFSPIKRVNFDVEDVWVGNRTDLDKLVLEINTDGSLTPEEAISLAAKVLDE HLDLLINLNEEITDVDLMVEKEEEEKDKVLETTIEELDLSVRSSNCLKRAGIDNVEEL TEQTEDDLMKVRNLGKKSLQEIKDKLDELDLSLKKPEI" misc_feature 193726..194616 /locus_tag="Acear_0189" /note="DNA-directed RNA polymerase subunit alpha; Provisional; Region: PRK05182" /db_xref="CDD:179956" misc_feature 193747..194391 /locus_tag="Acear_0189" /note="N-terminal domain of the Alpha subunit of Bacterial RNA polymerase; Region: RNAP_alpha_NTD; cd06928" /db_xref="CDD:132904" misc_feature order(193747..193749,193753..193755,193789..193791, 193798..193800,193804..193812,193819..193821, 193831..193833,193840..193845,193855..193857, 194359..194361,194368..194373,194377..194382, 194386..194391) /locus_tag="Acear_0189" /note="alphaNTD homodimer interface [polypeptide binding]; other site" /db_xref="CDD:132904" misc_feature order(193780..193782,193816..193818,193828..193830, 193837..193842,193903..193905,193909..193911, 193915..193917,193921..193932,193945..193947, 193963..193965,194107..194109,194158..194160, 194218..194220,194224..194226,194242..194250, 194254..194265,194293..194295,194302..194304, 194308..194310) /locus_tag="Acear_0189" /note="alphaNTD - beta interaction site [polypeptide binding]; other site" /db_xref="CDD:132904" misc_feature order(193909..193911,193945..193947,193954..193956, 193963..193968,194155..194160,194164..194166, 194224..194226,194239..194244,194269..194271) /locus_tag="Acear_0189" /note="alphaNTD - beta' interaction site [polypeptide binding]; other site" /db_xref="CDD:132904" misc_feature 194470..194616 /locus_tag="Acear_0189" /note="Bacterial RNA polymerase, alpha chain C terminal domain; Region: RNA_pol_A_CTD; cl11613" /db_xref="CDD:187104" gene 194688..195029 /locus_tag="Acear_0190" /db_xref="GeneID:9512192" CDS 194688..195029 /locus_tag="Acear_0190" /note="COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: hor:Hore_01460 ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: B8D0T8 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L17P" /protein_id="YP_003826806.1" /db_xref="GI:302390986" /db_xref="GeneID:9512192" /translation="MVQRKLSRKGAERKALLRSLMISLFKNDRIETTEPKAKEAQRSA EKLITTAKDDTRNARKKAMSILNDKEAVTRLFEDVAPRFMERPGGYTRILKLGPRRGD GAEMAILELVE" misc_feature 194688..195023 /locus_tag="Acear_0190" /note="Ribosomal protein L17; Region: Ribosomal_L17; cl00356" /db_xref="CDD:193783" gene 195178..196014 /locus_tag="Acear_0191" /db_xref="GeneID:9512193" CDS 195178..196014 /locus_tag="Acear_0191" /note="COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593:IPR015856; KEGG: aoe:Clos_0523 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8MLH1 ABC transporter related; PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; TIGRFAM: cobalt transport protein ATP-binding subunit" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003826807.1" /db_xref="GI:302390987" /db_xref="GeneID:9512193" /translation="MEPLIELNNLYYKYEDQSDADWAVDNINLEIDAGEFIAVVGHNG SGKSTLAKLLNGLLLPTKGEVMVGGKSTADEEELWEIRQQLGMVFQNPDNQLVANIVE EDVAFGPENLGLPSKEIKKRVKEALEVVGMAEYARHAPHKLSGGQKQRVAIAGVIAMR PDCLVFDEPTAMLDPVGRQEVIETVEQLNREENLTIIYITHFMDEIVKADRILVFEEG EVALSGTPAEVFSRIDRIKELALEVPQVTELAYELKKSGLDINGDIFSIDRLVEEICS LN" misc_feature 195178..196008 /locus_tag="Acear_0191" /note="cobalt transporter ATP-binding subunit; Provisional; Region: PRK13633" /db_xref="CDD:184193" misc_feature 195193..195834 /locus_tag="Acear_0191" /note="Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This...; Region: ABC_cobalt_CbiO_domain1; cd03225" /db_xref="CDD:72984" misc_feature 195298..195321 /locus_tag="Acear_0191" /note="Walker A/P-loop; other site" /db_xref="CDD:72984" misc_feature order(195307..195312,195316..195324,195445..195447, 195676..195681,195778..195780) /locus_tag="Acear_0191" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72984" misc_feature 195436..195447 /locus_tag="Acear_0191" /note="Q-loop/lid; other site" /db_xref="CDD:72984" misc_feature 195604..195633 /locus_tag="Acear_0191" /note="ABC transporter signature motif; other site" /db_xref="CDD:72984" misc_feature 195664..195681 /locus_tag="Acear_0191" /note="Walker B; other site" /db_xref="CDD:72984" misc_feature 195688..195699 /locus_tag="Acear_0191" /note="D-loop; other site" /db_xref="CDD:72984" misc_feature 195766..195786 /locus_tag="Acear_0191" /note="H-loop/switch region; other site" /db_xref="CDD:72984" misc_feature 195862..195999 /locus_tag="Acear_0191" /note="Cobalt ATP-binding cassette C terminal; Region: CoABC_C; pfam12370" /db_xref="CDD:193002" gene 195999..196841 /locus_tag="Acear_0192" /db_xref="GeneID:9512194" CDS 195999..196841 /locus_tag="Acear_0192" /note="COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593:IPR015856; KEGG: cno:NT01CX_1147 cobalt transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A0PXX8 Cobalt import ATP-binding protein cbiO 2; PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; TIGRFAM: cobalt transport protein ATP-binding subunit" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003826808.1" /db_xref="GI:302390988" /db_xref="GeneID:9512194" /translation="MFIELESVAHSYDDTDEKVLRDINFSISEGEFISLIGHTGSGKS TLVQLLNGLITPTEGRVIIDGDDITTENVDLKSIRRQVGLVFQYPEHQLFEETVGKDI AFGPKNLNLSDKEVNRRVKEALDSVGLDYDSFKDRSPFNLSGGQQRRVAIAGVLAMRP KVLILDEPTAGLDPKTRSELMDEIIKFKDEFGLTIILVSHRMEEVFQLADRILVLHQG RLAFDEAPEELANKYQQLEEIDLGVPKVTEVLVALQKCDYDLDSTLFNVQAAKEEIIK ALRG" misc_feature 195999..196838 /locus_tag="Acear_0192" /note="cobalt transporter ATP-binding subunit; Provisional; Region: cbiO; PRK13637" /db_xref="CDD:184197" misc_feature 196008..196655 /locus_tag="Acear_0192" /note="Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This...; Region: ABC_cobalt_CbiO_domain1; cd03225" /db_xref="CDD:72984" misc_feature 196107..196130 /locus_tag="Acear_0192" /note="Walker A/P-loop; other site" /db_xref="CDD:72984" misc_feature order(196116..196121,196125..196133,196257..196259, 196494..196499,196596..196598) /locus_tag="Acear_0192" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72984" misc_feature 196248..196259 /locus_tag="Acear_0192" /note="Q-loop/lid; other site" /db_xref="CDD:72984" misc_feature 196422..196451 /locus_tag="Acear_0192" /note="ABC transporter signature motif; other site" /db_xref="CDD:72984" misc_feature 196482..196499 /locus_tag="Acear_0192" /note="Walker B; other site" /db_xref="CDD:72984" misc_feature 196506..196517 /locus_tag="Acear_0192" /note="D-loop; other site" /db_xref="CDD:72984" misc_feature 196584..196604 /locus_tag="Acear_0192" /note="H-loop/switch region; other site" /db_xref="CDD:72984" gene 196846..197640 /locus_tag="Acear_0193" /db_xref="GeneID:9512195" CDS 196846..197640 /locus_tag="Acear_0193" /note="COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: cby:CLM_3915 cobalt transport permease, CbiQ family; PFAM: cobalt transport protein; SPTR: C1FMR8 Cobalt transport permease, CbiQ family; PFAM: Cobalt transport protein" /codon_start=1 /transl_table=11 /product="cobalt transport protein" /protein_id="YP_003826809.1" /db_xref="GI:302390989" /db_xref="GeneID:9512195" /translation="MLKDIMLGQYLERDSIIHKLDPRVKILLVIFYIVILFVSETFFG YLALGVFIAVSTLVSKIEFKYILKSLKPLLFIISLTLIIHLFLTKGGEVLWQWKFLSI EKKGLELGLFMAARLIFLITFTSLLTLTTSPIELTDGLERLLEPFKRFGVPAHELAMM MTIALRFIPTLLEEAEKILKAQKARGADFESGNLIQKAKNLIPLLVPLFVSAFRRADE LALAMEARCYRGGEGRSRMNQLKLSTSDYLTGVIVSGFLIIVAIWA" misc_feature 196858..197634 /locus_tag="Acear_0193" /note="Cobalt transport protein; Region: CbiQ; cl00463" /db_xref="CDD:186013" gene 197676..198410 /locus_tag="Acear_0194" /db_xref="GeneID:9512196" CDS 197676..198410 /locus_tag="Acear_0194" /EC_number="5.4.99.12" /EC_number="4.2.1.70" /note="COGs: COG0101 Pseudouridylate synthase; InterProIPR020097:IPR020094:IPR020095:IPR020103:IPR 001406; KEGG: cth:Cthe_2939 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; PRIAM: tRNA-pseudouridine synthase I; SPTR: C7HHF2 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase A" /protein_id="YP_003826810.1" /db_xref="GI:302390990" /db_xref="GeneID:9512196" /translation="MRYLKAIIAYDGTNYYGFQHQPDVPTIQDELEESLRILTKEKNK VIVAGRTDRGVHAQNQVINFKTESPIPLENIRFAWNNCLPNDILIKEVEDVNADFHAR YDAEGKIYEYRILNQPLPSVFKRNYTYHIKEELDSAAMAEAAECLIGTYDFSSFQASG SNVQTTVRTIQQAEVTQQDRLVIFRIEGDGFLYNMVRIIVGTLIKVGTGEWEVPRMSR IIEAEDRLAAGPTAPAQGLRLIKVKY" misc_feature 197676..198407 /locus_tag="Acear_0194" /note="tRNA pseudouridine synthase A; Validated; Region: truA; PRK00021" /db_xref="CDD:178798" misc_feature 197691..198407 /locus_tag="Acear_0194" /note="PseudoU_synth_EcTruA: Pseudouridine synthase, Escherichia coli TruA like. This group consists of eukaryotic and bacterial pseudouridine synthases similar to E. coli TruA, Pseudomonas aeruginosa truA and human pseudouridine synthase-like 1 (PUSL1)...; Region: PseudoU_synth_EcTruA; cd02570" /db_xref="CDD:30020" misc_feature order(197700..197702,197913..197915,197922..197945) /locus_tag="Acear_0194" /note="dimerization interface 3.5A [polypeptide binding]; other site" /db_xref="CDD:30020" misc_feature order(197820..197831,198264..198266) /locus_tag="Acear_0194" /note="active site" /db_xref="CDD:30020" gene 198535..198963 /locus_tag="Acear_0195" /db_xref="GeneID:9512197" CDS 198535..198963 /locus_tag="Acear_0195" /note="COGs: COG0102 Ribosomal protein L13; InterPro IPR005822:IPR005823; KEGG: nth:Nther_0229 50S ribosomal protein L13; PFAM: ribosomal protein L13; SPTR: B2A4Q6 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L13P" /protein_id="YP_003826811.1" /db_xref="GI:302390991" /db_xref="GeneID:9512197" /translation="MTTYMAKPEEIERDWFVVDAAGERLGRLASKIANVLRGKHKPTY TPHVDTGDYVIVVNAGEVVLTGNKLDQKMHHTHSEYPGGLKSTSYRELLEEKPEKVIE LAVKGMVPKNKLGRKMMKKLKIYAASEHPHEAQQPEELEI" misc_feature 198577..198912 /locus_tag="Acear_0195" /note="Ribosomal protein L13. Protein L13, a large ribosomal subunit protein, is one of five proteins required for an early folding intermediate of 23S rRNA in the assembly of the large subunit. L13 is situated on the bottom of the large subunit, near the...; Region: Ribosomal_L13; cd00392" /db_xref="CDD:88313" misc_feature order(198604..198606,198610..198615,198622..198624, 198631..198633,198643..198645,198727..198729, 198733..198735,198817..198822,198838..198846, 198850..198858,198862..198870,198874..198876, 198880..198882,198892..198894,198901..198906) /locus_tag="Acear_0195" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:88313" misc_feature 198820..198822 /locus_tag="Acear_0195" /note="L3 interface [polypeptide binding]; other site" /db_xref="CDD:88313" gene 198995..199387 /locus_tag="Acear_0196" /db_xref="GeneID:9512198" CDS 198995..199387 /locus_tag="Acear_0196" /note="COGs: COG0103 Ribosomal protein S9; InterPro IPR020574:IPR000754:IPR014721:IPR020568; KEGG: hor:Hore_02470 ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: B8D0U4 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S9P" /protein_id="YP_003826812.1" /db_xref="GI:302390992" /db_xref="GeneID:9512198" /translation="MAEVEYLGTGRRKTATARVRLRPGSGEIVVNDKPLNEYFSRKVS EEKVKQPLRATDTLGEFDILVNVNGGGLSGQAGAIRHAVARALLEVDKDYRSTLKERG FLTRDPRMKERKKYGRKKARKSPQFSKR" misc_feature 198995..199384 /locus_tag="Acear_0196" /note="Ribosomal protein S9/S16; Region: Ribosomal_S9; cl00334" /db_xref="CDD:193774" gene 200121..201011 /locus_tag="Acear_0197" /db_xref="GeneID:9512199" CDS 200121..201011 /locus_tag="Acear_0197" /EC_number="3.5.3.1" /note="COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR020855:IPR006035:IPR005924:IPR014033; KEGG: dhd:Dhaf_0755 arginase; PFAM: Arginase/agmatinase/formiminoglutamase; SPTR: Q24ZK6 Putative uncharacterized protein; TIGRFAM: arginase; PFAM: Arginase family; TIGRFAM: arginase" /codon_start=1 /transl_table=11 /product="arginase" /protein_id="YP_003826813.1" /db_xref="GI:302390993" /db_xref="GeneID:9512199" /translation="MKIGIIGVPMDLGASRRGVDMGPSAVRYAHLAARIEELGLEVTD FGDIDVPVIRSELENIDRSNFIPEIRDVCTSLSKKVQEIMIKGFIPLVIGGDHSIAIG TFGGVANAGKNVGLLWFDAHGDFNNLTTSQTGNPHGMPLAVINSDGPEDLVSITEGYD LCEDNIALVGIRDLDYKERQRLKDTDIDVYTISDIDRQGIEEILEKAIQSAGCGTEGV HVSFDVDVLDPLTAPGVGTAVPGGLDYREAHLALEMIAEAGVLASLELVEVNPILDER NRTAELAVELILSCLGKNIL" misc_feature 200130..201008 /locus_tag="Acear_0197" /note="Arginase family; Region: Arginase; cl00306" /db_xref="CDD:193759" gene 201030..202457 /locus_tag="Acear_0198" /db_xref="GeneID:9512200" CDS 201030..202457 /locus_tag="Acear_0198" /note="COGs: COG3885 conserved hypothetical protein; InterPro IPR004183:IPR002733; KEGG: chy:CHY_2268 hypothetical protein; PFAM: AMMECR1 domain protein; Extradiol ring-cleavage dioxygenase class III protein subunit B; SPTR: Q3A9V7 3,4-dihydroxyphenylacetate 2,3-dioxygenase, homolog/AMMECR1 domain protein; PFAM: AMMECR1; Catalytic LigB subunit of aromatic ring-opening dioxygenase; TIGRFAM: conserved hypothetical protein TIGR00296" /codon_start=1 /transl_table=11 /product="AMMECR1 domain protein" /protein_id="YP_003826814.1" /db_xref="GI:302390994" /db_xref="GeneID:9512200" /translation="MSGIVFAGLSPHPPVAVPEIGRSRLNEIEDTRTAMKELASKVKE SNPDLVITISPHGPVFSDAISILNLEELKGDFGQFGLPEIELSYGLQEDVVEELVRVT KLEDSTGGRIEVARIDEQTARKFEIDPKLDHGALVPLYYLAEASLENLPLVPITMGML PYEDLYEFGKIIQLIAVKLDYDIAVIASGDLSHRLTPDAPAGFNPQAEEFDQQLIKAL EKDRVEDIFELDQDLIEKAGECGLRPIIIMLGALDGLAVEPELLSYEGPFGVGYGVVS YKINGEDKSRKRLDDLLDKRQARLEKQKAEESELVKLARKTIEEYALNREVIDSPQEL PPEMEAKRGVFVSIKKHGQLRGCIGTTAPTEDNVAEEIIRNALHAGFKDPRFEEIDIN ELEDLTYSVDVLEEPKPVDTLDELDPQEYGVIVQKGQQTGLLLPNLEGVETVEKQLEI AKRKAGLSPTEEDVELKRFKVTRYK" misc_feature 201036..202454 /locus_tag="Acear_0198" /note="hypothetical protein; Provisional; Region: PRK03881" /db_xref="CDD:179666" misc_feature 201054..201857 /locus_tag="Acear_0198" /note="The N-terminal domain, an extradiol dioxygenase class III subunit B-like domain, of unknown proteins containing a C-terminal AMMECR1 domain; Region: ED_3B_N_AMMECR1; cd07951" /db_xref="CDD:153388" misc_feature 201957..202454 /locus_tag="Acear_0198" /note="AMMECR1; Region: AMMECR1; cl00911" /db_xref="CDD:186253" gene 202470..203459 /locus_tag="Acear_0199" /db_xref="GeneID:9512201" CDS 202470..203459 /locus_tag="Acear_0199" /note="COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197:IPR013785:IPR006638:IPR016431; KEGG: mta:Moth_2294 radical SAM family protein; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q2RG58 radical SAM; PFAM: radical SAM superfamily" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003826815.1" /db_xref="GI:302390995" /db_xref="GeneID:9512201" /translation="MKEARWYERLDEEEIRCNLCPHSCLITAGQTGICQARENQEGRL VSKTYGQVSAVAVDPIEKKPLFHFYPGSEILSLGTVGCNLRCQFCQNYHIAHNQEAET RRLEPEEIVTLVKKHNSIGAAYTYSEPLIWYEYILDTAQLIHQTGLKNVLVTNGLINP EPLAGLLSYIDGLNIDLKAFSEEFYRDICQGYLEPVKESIRLANQEALVEVTTLLIPG LNDSREEIEELTAWLADINPDIPLHFTRYFPKYKLQAEQTSMETLLQAKEIAEEKLNF VYLGNVREPEYSNTYCYECGQLLIKRSWSQPEIYLQDDICPECGAEINILLAD" misc_feature 202578..203345 /locus_tag="Acear_0199" /note="Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]; Region: PflA; COG1180" /db_xref="CDD:31373" misc_feature 202710..203237 /locus_tag="Acear_0199" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature order(202713..202715,202719..202721,202725..202727, 202731..202739,202842..202844,202848..202853, 202926..202934,202995..202997,203109..203111, 203205..203210) /locus_tag="Acear_0199" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" gene 203697..204128 /locus_tag="Acear_0200" /db_xref="GeneID:9512202" CDS 203697..204128 /locus_tag="Acear_0200" /note="COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR010916:IPR002068:IPR008978; KEGG: hor:Hore_14610 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: B8CY41 Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family" /codon_start=1 /transl_table=11 /product="heat shock protein Hsp20" /protein_id="YP_003826816.1" /db_xref="GI:302390996" /db_xref="GeneID:9512202" /translation="MRPTTWNPFSEIKTLRDQMNKFLDETFHSPEGIELQPSVDIFEE GEEIVAKVNIPGIDPEKVEIMISEDTLIVQGEVTEERQMDEEGYHKLERQTGRFKRTI SLPFKVEREAASASAEHGVLEIRMPKSEEEIEKITRLEIND" misc_feature 203718..204122 /locus_tag="Acear_0200" /note="Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]; Region: IbpA; COG0071" /db_xref="CDD:30420" misc_feature 203814..204080 /locus_tag="Acear_0200" /note="Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are...; Region: ACD_sHsps-like; cd06464" /db_xref="CDD:107221" misc_feature order(203814..203828,203847..203849,203853..203855, 203859..203864,203994..203996,204054..204059) /locus_tag="Acear_0200" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:107221" gene 204496..205728 /locus_tag="Acear_0201" /db_xref="GeneID:9512203" CDS 204496..205728 /locus_tag="Acear_0201" /note="COGs: COG1167 transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR004839:IPR015421:IPR015422:IPR015424; KEGG: tga:TGAM_1056 multiple substrate aminotransferase; PFAM: aminotransferase class I and II; SPTR: C5A5P6 Multiple substrate aminotransferase; PFAM: Aminotransferase class I and II" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_003826817.1" /db_xref="GI:302390997" /db_xref="GeneID:9512203" /translation="MFEEYFSDNAKQMRSSEIREFFKLTEKPEVISFAGGFPSKDCLP IDQVQEVNKRLLLEAEEEMLQYSPTEGQEDLRKYIVDFMAQKGIDVGVDNILVTSGSQ QGLDLVSKIFINPGDKVITESPSYVGGLGAIRNYRGDILSIKVDNKGLRLDLLEAELE RLTNNGQQIKFIYLVADFNNPTGLSLAVERREKLVELAEKYEFLILEDDPYSKLKYDG PERPAIKNFDKQGRVIYLGSFSKIFIPGIRVGWVVAAEEVIQKLILAKQSTDLCSNSM GQRLIAACGREGIIDNQIKKLCRLYRRRRDKTMESLNKYFPPEVNWTEPEGGFYTWVE LPPYLNSKDLLFKAIEQNVAYVSGEAFSSSGQKQNAFRLSFSQPTLEEIEEGIYRLSE VIKTELNSFEARNQRCIK" misc_feature 204532..205680 /locus_tag="Acear_0201" /note="aspartate aminotransferase; Provisional; Region: PRK08361" /db_xref="CDD:169403" misc_feature 204586..205671 /locus_tag="Acear_0201" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature order(204793..204801,204871..204873,205033..205035, 205126..205128,205207..205209,205213..205218, 205237..205239) /locus_tag="Acear_0201" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature order(204802..204804,204901..204903,205105..205107, 205231..205239,205324..205326,205333..205335) /locus_tag="Acear_0201" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature 205216..205218 /locus_tag="Acear_0201" /note="catalytic residue [active]" /db_xref="CDD:99734" gene complement(205703..206431) /locus_tag="Acear_0202" /db_xref="GeneID:9512204" CDS complement(205703..206431) /locus_tag="Acear_0202" /note="InterPro IPR003675; KEGG: hor:Hore_02510 hypothetical protein; PFAM: Abortive infection protein; SPTR: B8D0U8 Putative uncharacterized protein; PFAM: CAAX amino terminal protease family" /codon_start=1 /transl_table=11 /product="Abortive infection protein" /protein_id="YP_003826818.1" /db_xref="GI:302390998" /db_xref="GeneID:9512204" /translation="MKHIIELINKKDKQYTWTNYELIKYQLLWYLSLFLFSLTQRYNF PNLPQIDSLFHYLFGIPIKLLMIAYLIYILLFKKSFTLNQIGLTSNNYFADFTLGIKV SLPLPILTIILINLQHHHLDFNQLFEPLIKITSFNELITSFLYFIVLVSIALIPATAK ELFYRTIIYNFFKERLGLMFGALLSSVYYSLASLQFSFGLMLSNFIVGGISIYLYERN NNLFSSIIWQSFYQATTILYIFGF" misc_feature complement(205754..206008) /locus_tag="Acear_0202" /note="CAAX amino terminal protease self- immunity; Region: Abi; cl00558" /db_xref="CDD:193868" gene 206604..209474 /locus_tag="Acear_0203" /db_xref="GeneID:9512205" CDS 206604..209474 /locus_tag="Acear_0203" /EC_number="1.1.5.3" /note="COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR006094:IPR004113:IPR004017:IPR016167:IPR 012285:IPR016166:IPR016164:IPR009051:IPR017753; KEGG: hma:rrnAC1967 glycolate oxidase subunit GlcD; PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: C1SJH5 FAD/FMN-dependent dehydrogenase; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; PFAM: cysteine-rich domain; FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit" /codon_start=1 /transl_table=11 /product="glycerol 3-phosphate dehydrogenase (quinone) subunit C" /protein_id="YP_003826819.1" /db_xref="GI:302390999" /db_xref="GeneID:9512205" /translation="MTNLKLEEQMDELNSLIDGEVLTDETNRILYSTDASIYQIEPLG VVLPKNKSDVQKAVEYASNNGLSIIPRGAGSGLSGQTLGQGIVIDFTKYMDRIKEINI EESYVRLEPGVTLGVLNQTLSQDNKFLPPDPSSGNYCTLGGMLGNNASGGHSVKYGST IDYVLELEVVLADGEEIKVENLEIGSQQFKAKLNQSNKVGDIYQQILELVKNNKELIA EHTPDARKNCSGYRLDEVLADQQFNLAKLLVGSEGTLAVITEAKLRIAELPSEQAIAL LYFDDLDKAGRAVDKVLELDPSAIEIMNYGFLELVRKNHADIDQRLPDDLKTALLIEF DGDSQSEIEEKILQTEELICDELGLAFEIDTAHEEAEQKKLWSVRKSAVPILNKLEGP KRITGFVEDVAVAPAKLPDYIRRFKEIMDKYEVEAIIYGHAGHGNTHPRPLLNLKQEE DIEKMEAIAQDVYELVNELNGTISGEHGDGLLRTDFIEEIYGSMYDLFQKTKEIFDPE YILNPGKIVVDTTDLLTENLRYGADYETIGVESDLEFATEYQKEVEKCHGCSKCRSVV GTDMCPVFKALGEEKAAPRAKANILRGLISGRLDYNEYLKSRAFQEVFDLCLNCKNCY LECSSEVNIPKLIMEARIQHYRQTGQPLVNRFLGASEVLGKLGSITPKLTNTFLDAAP LRGMMEKMTGIAKKRSLPEFTDNTFKEWFAGRENKADKKVAYFVGCSTNYYHPEVGKG LVQLLEANGYQVIIPDQKCCSVANLNYGNLEGVQENINYNLESLVEVVKEGYDIVADC PSCSLMLKEEQLDVVDTKEARLVAENTYHINEYLLNLKEKDELKLDFNPNEIDFLYHT PCHLKAQGLASSTEELLGFIPELEIKELDAGCCGIAGTFGLKKDKYDLSMEIGENLFK KIESSNLEKVLTDCDACRMQLEEGTGKAVRHPIEILAENLSD" misc_feature 206649..208154 /locus_tag="Acear_0203" /note="FAD/FMN-containing dehydrogenases [Energy production and conversion]; Region: GlcD; COG0277" /db_xref="CDD:30625" misc_feature 206727..207140 /locus_tag="Acear_0203" /note="FAD binding domain; Region: FAD_binding_4; pfam01565" /db_xref="CDD:190040" misc_feature 208263..209465 /locus_tag="Acear_0203" /note="sn-glycerol-3-phosphate dehydrogenase subunit C; Provisional; Region: glpC; PRK11168" /db_xref="CDD:183008" misc_feature 209229..209411 /locus_tag="Acear_0203" /note="Cysteine-rich domain; Region: CCG; pfam02754" /db_xref="CDD:111630" gene 209487..211145 /locus_tag="Acear_0204" /db_xref="GeneID:9512206" CDS 209487..211145 /locus_tag="Acear_0204" /EC_number="4.2.1.9" /note="COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR020558:IPR000581:IPR004404; KEGG: cth:Cthe_2713 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: C7HB79 Dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase" /codon_start=1 /transl_table=11 /product="dihydroxyacid dehydratase" /protein_id="YP_003826820.1" /db_xref="GI:302391000" /db_xref="GeneID:9512206" /translation="MRSDQATKGVNKAPHRSLFKAMGYTDKEIERPLIGIANAQNEVI PGHDHLDQIAEAVKAGVRMEGGTPIEFGGIGVCDGIAMGHQGMHYSLASREVIADSIE IMAQAHALDALVLIPNCDKIVPGMLMAAARINIPTVVVSGGPMLAGRHQGENIDLKTV FESVAAVQTGKLAEEELLEVENNACPGCGSCSGMFTANSMNCLTEVLGLGLPGNGTIP AVYAQRRRLAKRAGMQIMEMLDKDIKPLDILTEKSFENALAVDMALGCSTNTALHLPA IAHEAGIDLDLELINEISAEVPHLCSLSPAGKHHIEDLNEAGGIPAVMKVLSSEGILN EGLRTVTGVTIEENLAEAEVLNEDVIRNFETAYHQTGGLAVLKGNLAPDGAVVKQAAV ADEMLVHEGPARIFNSEEETVEAIHNGEIKAGDVVIIKYEGPKGGPGMREMLTPTSAV AGAGLDKEVALITDGRFSGATRGASIGHASPEAMEGGPIAVVEEGDIVEIDIPNRQLN VKLSQKEIENRLEDWSQPEPKIKTGYLSRYAKLVSSASTGAVFK" misc_feature 209487..211142 /locus_tag="Acear_0204" /note="Dehydratase family; Region: ILVD_EDD; cl00340" /db_xref="CDD:185921" misc_feature 209547..211142 /locus_tag="Acear_0204" /note="dihydroxy-acid dehydratase; Region: ilvD; TIGR00110" /db_xref="CDD:161713" gene 211928..213664 /locus_tag="Acear_0205" /db_xref="GeneID:9512207" CDS 211928..213664 /locus_tag="Acear_0205" /EC_number="2.2.1.6" /note="COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterProIPR000399:IPR012001:IPR012000:IPR011766:IPR 012846; KEGG: hor:Hore_10830 acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: B8CX18 Acetolactate synthase; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type" /codon_start=1 /transl_table=11 /product="acetolactate synthase, large subunit" /protein_id="YP_003826821.1" /db_xref="GI:302391001" /db_xref="GeneID:9512207" /translation="MEFTGAEIFVKALLEEGVDKIFGYPGGAVIPIYDALYEADIECV LARHEQGSAHAADGYARSTGRPGVCLATSGPGATNLVTGLATAHMDSIPLVAFTGQVP TGMLGTDAFQEADITGATLPMTKHNYLVQQVEDLPRIIKEAFHIATTGRPGPVLIDIP KDVQMDKTVFEYPTEVNLPGYDPTYNGHGLQVKKAADAIKRAEKPVIYAGGGVVASGA AEELRELARKAEIPVTTTLMGLGSFPETDDLALEMLGMHGTEYANYAVSETDLLIAVG ARFDDRVTGDLETFAKGAEIIHIDIDPAEVSKRVTVDIPIVGDVKNVLQDLNQQVKEQ EHSEWCKRIQEWKEESIISSDKGSEALTPKLVIETIDEVTGDDVLLATEVGQNQMWAA QYYKYTKPRSFVSSGGLGTMGYGFPASLGIQIGNPEATVFCIAGDGSLQMNSQELATA VQHELPVNVAILNNSYLGMVRQWQEIFNEKRYASTCLKKRQSCPTECSGPDSDRSCPE MTPDFVKLAEAYGALGIRVTEPEEVKPALEKAVASSKSVVIDFVIEREENVFPMVPAG GSLDNMLVGEDN" misc_feature 211937..213658 /locus_tag="Acear_0205" /note="acetolactate synthase 3 catalytic subunit; Reviewed; Region: PRK06048" /db_xref="CDD:180368" misc_feature 211946..212410 /locus_tag="Acear_0205" /note="Pyrimidine (PYR) binding domain of POX and related proteins; Region: TPP_PYR_POX_like; cd07035" /db_xref="CDD:132918" misc_feature order(211985..211987,212000..212005,212015..212017, 212027..212029,212051..212071,212078..212080, 212087..212092,212099..212104,212108..212116, 212150..212152,212171..212173,212183..212185, 212192..212197) /locus_tag="Acear_0205" /note="PYR/PP interface [polypeptide binding]; other site" /db_xref="CDD:132918" misc_feature order(212000..212008,212015..212017,212027..212029, 212054..212056,212060..212071,212075..212077, 212150..212152,212159..212164,212168..212173, 212180..212182,212282..212284,212291..212293) /locus_tag="Acear_0205" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132918" misc_feature order(212000..212002,212072..212074,212150..212152, 212162..212164) /locus_tag="Acear_0205" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132918" misc_feature 212501..212908 /locus_tag="Acear_0205" /note="Thiamine pyrophosphate enzyme, central domain; Region: TPP_enzyme_M; pfam00205" /db_xref="CDD:189448" misc_feature 213008..213625 /locus_tag="Acear_0205" /note="Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS. AHAS catalyzes the condensation of two molecules of pyruvate to give the...; Region: TPP_AHAS; cd02015" /db_xref="CDD:48178" misc_feature order(213077..213088,213155..213157,213161..213163, 213236..213244,213251..213253,213317..213319) /locus_tag="Acear_0205" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:48178" misc_feature order(213146..213148,213155..213157,213161..213163, 213248..213253,213257..213262,213281..213283, 213458..213463,213473..213475,213482..213484) /locus_tag="Acear_0205" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48178" gene 213664..214146 /locus_tag="Acear_0206" /db_xref="GeneID:9512208" CDS 213664..214146 /locus_tag="Acear_0206" /EC_number="2.2.1.6" /note="COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR002912:IPR019455:IPR004789; KEGG: mac:MA3791 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; SPTR: Q8TJJ3 Acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit" /codon_start=1 /transl_table=11 /product="acetolactate synthase, small subunit" /protein_id="YP_003826822.1" /db_xref="GI:302391002" /db_xref="GeneID:9512208" /translation="MKHTVSVLVANKSGVLARIASLFSRRGFNIDSLSVGTTENPTVS RITIVVEGDEHVLEQVTKQLNKLIDVHKVSDITNDSSVDRDLALIKVKATPKDRSEIM QVVDIFRGKIVDVASDSLMIEITGDEEKVNALEELLRPFGIVELVRTGKIAMVRGDKE " misc_feature 213664..214140 /locus_tag="Acear_0206" /note="acetolactate synthase 3 regulatory subunit; Reviewed; Region: ilvH; PRK11895" /db_xref="CDD:183365" misc_feature 213670..213885 /locus_tag="Acear_0206" /note="N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS); Region: ACT_AHAS; cd04878" /db_xref="CDD:153150" misc_feature order(213688..213690,213694..213696,213709..213711, 213748..213753,213766..213768,213793..213795) /locus_tag="Acear_0206" /note="putative valine binding site [chemical binding]; other site" /db_xref="CDD:153150" misc_feature order(213700..213705,213712..213714,213733..213735, 213742..213744,213754..213768,213796..213798) /locus_tag="Acear_0206" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:153150" misc_feature 213913..214134 /locus_tag="Acear_0206" /note="Small subunit of acetolactate synthase; Region: ALS_ss_C; pfam10369" /db_xref="CDD:150959" gene 214194..215183 /locus_tag="Acear_0207" /db_xref="GeneID:9512209" CDS 214194..215183 /locus_tag="Acear_0207" /EC_number="1.1.1.86" /note="COGs: COG0059 Ketol-acid reductoisomerase; InterProIPR013116:IPR000506:IPR016040:IPR008927:IPR 013023; KEGG: tpd:Teth39_0014 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase; PRIAM: Ketol-acid reductoisomerase; SPTR: C7IRE7 Ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase" /codon_start=1 /transl_table=11 /product="ketol-acid reductoisomerase" /protein_id="YP_003826823.1" /db_xref="GI:302391003" /db_xref="GeneID:9512209" /translation="MKMYYDEDANLEYLEGRTVAVIGYGSQGHAQSQNLRDSGIDVIV SELEGTENYELAVEDGFDPVGAEEAAKEADVIQILLPDEVQKKVYYNDIEPHLEEGNA LVFSHGFNIHYKQIVPPENVDVYMVAPKGPGHLVRRVYKEGEGVPSLIAIYQDATGKA KDLALAHAKGVGGTRAGVIETTFKEETETDLFGEQAVLCGGVTELVKAGFETLTDAGY QPGIAYFECLHELKLIVDLMYEGGLAKMRNSISDTAEYGDLIAGEKVINDKSREAMQE LLDNVKNGEFAKRWLLENQVGRPAYLKRKEIDANHQIEEVGKELREMMDWIED" misc_feature 214194..215180 /locus_tag="Acear_0207" /note="ketol-acid reductoisomerase; Provisional; Region: PRK05479" /db_xref="CDD:180113" misc_feature 214230..214724 /locus_tag="Acear_0207" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 214740..215174 /locus_tag="Acear_0207" /note="Acetohydroxy acid isomeroreductase, catalytic domain; Region: IlvC; pfam01450" /db_xref="CDD:110451" gene 215229..216773 /locus_tag="Acear_0208" /db_xref="GeneID:9512210" CDS 215229..216773 /locus_tag="Acear_0208" /EC_number="2.3.3.13" /note="COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterProIPR002034:IPR000891:IPR013709:IPR013785:IPR 005671; KEGG: mta:Moth_2255 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; SPTR: Q2RG97 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="YP_003826824.1" /db_xref="GI:302391004" /db_xref="GeneID:9512210" /translation="MSESEIKIFDTTLRDGEQSPGVSLNIEEKLEIAHQLANLDVDVI EAGFPIASEGDFEAVKQIAKEVQGPVIAGLARTTKGDIDRAWEALKYSDKPRIHTFIA TSPVHMEYKLQKSPNEVLESVTEAVEYAKSYTDDVEFSAEDAFRSDKDFLCQVVEKAV AAGATTVNIPDTVGYATPAEFGGLIEYICNNVPNIEETIISVHCHNDLGLAVANSLAA IEKGAQQIECAVNGIGERAGNTALEEVVMALNTRCDYFDQTPEVTLDQIYKTSKLVSS LTGMSVQANKAIVGKNAFAHESGIHQDGVIKERTTYEIMDAKTIGLSENQIVLGKHSG RHAFKERLAELGYELEGDNLEKAFKRFKELADRKKSITDRDLEALVEDELKTIPQVYE LMETQVTSGNEVLPTATLKLKFDEEVIIDSACCEGGPIDAVYETINRITGLGCELESY AIDAITSGKDALGEVTVKLNYNEELFIGRGVSIDVIEASAKAYLNAVNKILYKNEELI GDKEDN" misc_feature 215244..216755 /locus_tag="Acear_0208" /note="2-isopropylmalate synthase; Validated; Region: PRK00915" /db_xref="CDD:179166" misc_feature 215250..216053 /locus_tag="Acear_0208" /note="2-isopropylmalate synthase (IPMS), N-terminal catalytic TIM barrel domain; Region: DRE_TIM_IPMS; cd07940" /db_xref="CDD:163678" misc_feature order(215268..215273,215280..215282,215361..215363, 215454..215456,215520..215522,215646..215648, 215652..215654,215736..215738,215742..215744, 215835..215837,215841..215843) /locus_tag="Acear_0208" /note="active site" /db_xref="CDD:163678" misc_feature order(215268..215273,215361..215363) /locus_tag="Acear_0208" /note="catalytic residues [active]" /db_xref="CDD:163678" misc_feature order(215835..215837,215841..215843) /locus_tag="Acear_0208" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163678" misc_feature 216399..216731 /locus_tag="Acear_0208" /note="LeuA allosteric (dimerisation) domain; Region: LeuA_dimer; pfam08502" /db_xref="CDD:149524" gene 216775..218037 /locus_tag="Acear_0209" /db_xref="GeneID:9512211" CDS 216775..218037 /locus_tag="Acear_0209" /EC_number="4.2.1.33" /note="COGs: COG0065 3-isopropylmalate dehydratase large subunit; InterProIPR018136:IPR001030:IPR015931:IPR015932:IPR 011823:IPR011826:IPR006251; KEGG: hor:Hore_10870 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; SPTR: B8CX22 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase; homoaconitate hydratase family protein; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydratase, large subunit" /protein_id="YP_003826825.1" /db_xref="GI:302391005" /db_xref="GeneID:9512211" /translation="MGMTMVEKILADHAGREEVQPGELINARLDIVLGNDVTTPVAIK EFDKIGVDEVFDKERVVIVPDHFAPNKDINSAEQCKFIRGFAEEKELVNYFEIGEMGI EHCLLPEQGLVLPGDAVIGADSHTCTYGALGAFATGVGSTDMAAGMATGEAWFKVPET IKFVYNGELNDWVGGKDLILYTIGDIGVDGALYKAMEFTGEVIENLPMDHRFTMSNMA IEAGGKCGLIEPDQTTIDYVEDRAQRDYKLYQSDEDAEYDEIIEYDVSQIEPQVAFPH LPENTRGISEVGEVEIDQAVIGSCTNGRLGDLRLAAKVLEGKKAADNVRLIVFPGTQE IYKQAMKEGLIETLIDAGAAVSTPTCGPCLGGHMGILAEGERAIATTNRNFVGRMGHP ESEVYLSNPAVAAASAIKGKIVSPKEVI" misc_feature 216775..218034 /locus_tag="Acear_0209" /note="3-isopropylmalate dehydratase large subunit; Reviewed; Region: PRK00402" /db_xref="CDD:179006" misc_feature 216865..218013 /locus_tag="Acear_0209" /note="3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; Region: IPMI; cd01583" /db_xref="CDD:153133" misc_feature order(216877..216879,216886..216888,217141..217146, 217864..217866,217921..217923,217936..217938) /locus_tag="Acear_0209" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:153133" misc_feature order(217147..217149,217672..217674,217852..217854, 217861..217866,217918..217920) /locus_tag="Acear_0209" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:153133" gene 218038..218532 /locus_tag="Acear_0210" /db_xref="GeneID:9512212" CDS 218038..218532 /locus_tag="Acear_0210" /EC_number="4.2.1.33" /note="COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR000573:IPR015928:IPR011824:IPR011827; KEGG: csc:Csac_1332 3-isopropylmalate dehydratase small subunit; PFAM: aconitate hydratase domain protein; SPTR: A4XJ49 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydratase, small subunit" /protein_id="YP_003826826.1" /db_xref="GI:302391006" /db_xref="GeneID:9512212" /translation="MELKGQAWKYGDDVDTDVIIPARYLNTSKPEELAKHCLEDLDED FVDKMKQGDMIVAEKNFGCGSSREHAPLAIKAAGVSCVIAKSFARIFYRNAINIGLPI LESEAAVDGIGIEDEVEVDVESGEIKNLTKDEVYQAEPFPEFMQNIIQAGGLINYVAG KVNN" misc_feature 218062..218361 /locus_tag="Acear_0210" /note="Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins. 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate 3-...; Region: IPMI_Swivel; cd01577" /db_xref="CDD:73275" misc_feature 218230..218238 /locus_tag="Acear_0210" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73275" gene 218532..219578 /locus_tag="Acear_0211" /db_xref="GeneID:9512213" CDS 218532..219578 /locus_tag="Acear_0211" /EC_number="1.1.1.85" /note="COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR019818:IPR001804; KEGG: hor:Hore_10890 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: B8CX24 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydrogenase" /protein_id="YP_003826827.1" /db_xref="GI:302391007" /db_xref="GeneID:9512213" /translation="MYKIAVIPGDGIGPEVTEEGIKVLEALAADSELEFEFEYFNLGA DHYLETGELVTDEVKEELAQFDAIYLGAVGDPRVEPGVLEKGILLDLRFTFDQYINLR PIKLLNEDFTPLKDKAGGDIDFTVVRENTEGLYAGFGGVLKKDTPDEVATQEMVNTRK GVERVIRYAFDYVQDRDEVDKVTVCDKRNVLTYAHGLWQRAFDDVAKDYPEVEEDHML VDAMTMKMVRNPEDFDVVVTCNMFGDIITDLGAEIQGGMGLAVSGNINPDGVSMFEPV HGSAPDIAGEDIANPTAAILAAAMMVEVLGHAEEADRIETAVQQALTDNKTTSDMGGD LSTAEAGDYISSLL" misc_feature 218532..219575 /locus_tag="Acear_0211" /note="Isocitrate/isopropylmalate dehydrogenase; Region: Iso_dh; cl00445" /db_xref="CDD:193821" misc_feature 218541..219563 /locus_tag="Acear_0211" /note="isocitrate dehydrogenase; Validated; Region: PRK06451" /db_xref="CDD:180566" gene 219606..221183 /locus_tag="Acear_0212" /db_xref="GeneID:9512214" CDS 219606..221183 /locus_tag="Acear_0212" /note="COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterProIPR002034:IPR000891:IPR013709:IPR013785:IPR 005675; KEGG: pfu:PF0941 alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase; SPTR: Q8U298 Leua homolog alpha-isopropylmalate synthase related; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein" /codon_start=1 /transl_table=11 /product="(R)-citramalate synthase" /protein_id="YP_003826828.1" /db_xref="GI:302391008" /db_xref="GeneID:9512214" /translation="MCLKMVELYDTTLRDGTQREGISYSTEDKLRITKKLDKLGIDYI EGGWPGSNPKDIEYFQQVQKLSLTNATVAAFGSTRRPGIEAKEDSNLEEIITSGVEIA TIVGKSWDFHVIEALETELEENLAMIEETISYLKSNGLQVFYDAEHFFDAYKSNTEYA IETIQAADRAGADRIILCDTNGGTLPLELREIIEKVKDKVDTSLGIHAHNDSEVAVAN SLLAVKSGVVQVQGTINGYGERCGNANLSSIIPNLKLKQGIDSVTEEQLKRLTGVSRF VSEVANLTPPTHKPYVGDSAFAHKGGIHVSALMKDPETYEHLAPETVGNRRKVLVSEL SGKSNLMYKAEEYGIEIDKENGDLKQALEKIKELEHQGYQFEGAKASFEILMKKATNS YEKLFELEGCRIITEKASGLTPLSEATIKVKVNGQIVHTAAEGEGPVNALDNALRKAL LEFYPALEEIYLIDYKVRVLDGNDGTSAKVRVLIESGNGHESWGTVGASTNIIEASWQ ALVDSIEYGIKLSQDKE" misc_feature 219606..221180 /locus_tag="Acear_0212" /note="putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional; Region: PRK12344" /db_xref="CDD:183457" misc_feature 219627..220442 /locus_tag="Acear_0212" /note="Desulfobacterium autotrophicum LeuA3 and related proteins, N-terminal catalytic TIM barrel domain; Region: DRE_TIM_LeuA3; cd07941" /db_xref="CDD:163679" misc_feature order(219645..219650,219657..219659,219738..219740, 219828..219830,219834..219836,220044..220046, 220137..220139,220224..220226,220230..220232) /locus_tag="Acear_0212" /note="active site" /db_xref="CDD:163679" misc_feature order(219645..219650,219738..219740) /locus_tag="Acear_0212" /note="catalytic residues [active]" /db_xref="CDD:163679" misc_feature order(219648..219650,220137..220139,220224..220226, 220230..220232) /locus_tag="Acear_0212" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163679" misc_feature 220794..221153 /locus_tag="Acear_0212" /note="LeuA allosteric (dimerisation) domain; Region: LeuA_dimer; pfam08502" /db_xref="CDD:149524" gene 221357..222748 /locus_tag="Acear_0213" /db_xref="GeneID:9512215" CDS 221357..222748 /locus_tag="Acear_0213" /note="COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: hor:Hore_22320 anion transporter; PFAM: sodium/sulphate symporter; SPTR: B8D0P1 Anion transporter; TIGRFAM: anion transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter" /codon_start=1 /transl_table=11 /product="anion transporter" /protein_id="YP_003826829.1" /db_xref="GI:302391009" /db_xref="GeneID:9512215" /translation="MFGQLKKLIAAFGILIFTVILLLPSPEGLSTAGKNSFAVFFLCL GLWVSQMLPLSVTGLLGIALMPLLNILGPEETFALFGNKAIFFILGALILAAGLYQTG LGTRIAAKIIGAFGKSPRHLLVGVLLSSGLLSCIMPEHAVAALLFPIVLEIATILELE PLKSNYGKLLFFAMAWGAIAGGITTFLGGARNLLAVGLLEKQYNISIGFFEWIKYSWP IPALLLAVVAFMMTKVFEIDISNIDKANEELKKRLQEAGKMSVREKKLSMVLVLVICS WLFLSQVIDISVTAILGGVLTFVVGVVEWQDIEEYINWSVLLMYGGAIVVATSLVKTG ATDWLSQAVFARVELPPFIFLVCLVIFTNLLTEGVSNVAAVAIVLPLAYSVGEAYSLN PIIITLSVALPGGLAFMLPMGTPPNAIAFSSGFYRVQDAVKLGIMLDVIAWLIYILVA RFYWPLIGLKITL" misc_feature 221369..222733 /locus_tag="Acear_0213" /note="Di- and tricarboxylate transporters [Inorganic ion transport and metabolism]; Region: CitT; COG0471" /db_xref="CDD:30819" misc_feature 221465..222718 /locus_tag="Acear_0213" /note="Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is...; Region: SLC13_permease; cd01115" /db_xref="CDD:73247" misc_feature order(221486..221497,221516..221557,221600..221653, 221723..221773,221777..221830,221858..221929, 221993..222037,222050..222067,222161..222181, 222203..222247,222290..222346,222416..222463, 222515..222574,222662..222700) /locus_tag="Acear_0213" /note="transmembrane helices; other site" /db_xref="CDD:73247" gene 222766..223257 /locus_tag="Acear_0214" /db_xref="GeneID:9512216" CDS 222766..223257 /locus_tag="Acear_0214" /note="KEGG: hor:Hore_17360 hypothetical protein; SPTR: B8CYW6 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826830.1" /db_xref="GI:302391010" /db_xref="GeneID:9512216" /translation="MKRIMLILFSFAKAEKVISRSFELLGEEDELYVAGFVDHKLPES LSDLISDVGFLGDKVTEDVESAVIAEYKKRAEGKLDLIIEQGEEYSGTVKAEMLSKDE LADLKSRIEQGKADYLLINYTDDHFLAEEVLDYPLDEILARIDIPYEVYYDGELSRQQ DEI" gene complement(223583..224818) /locus_tag="Acear_0215" /db_xref="GeneID:9512217" CDS complement(223583..224818) /locus_tag="Acear_0215" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: tna:CTN_1813 transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; SPTR: B9KAK6 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003826831.1" /db_xref="GI:302391011" /db_xref="GeneID:9512217" /translation="MNKTYILPINQQELAKQLSRQSGRIYSKVVSTIFKLKQNKNIWL SKNGMEKLIKLYASEFRLHSQTKQGIVQQYYNNLKSFFNAKENQENAKPPYKTRKYNK VIYKRSAIKLKDNGVLRLSNGRKGKAIKVKAPSLTKKPKYAELIYHHNEDKYKLHITV EVKNKKIDYDNDKVLAIDLGQKHPMVTYNNQTKESIIYNGGRLNSFIRFRNKELAKLQ EKMSRCQKYSNRWKKLNRAKKKLLSKSKNKIMDVLKKYASHLISFCLKREISTIVIGD LKGIREKINFGTKDNQKMHQWLFGQLIDIIKYQAKAIGIKVKFIDESYTSQTCPQCGY QHKPSDRNFDCPNCNVSFHRDFVGAFNIYKKYTRGSLDKSSRLEGVLTSSYGVKYDSN SISCLTNWNTSPFGQGIPA" misc_feature complement(223976..224638) /locus_tag="Acear_0215" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature complement(223724..223924) /locus_tag="Acear_0215" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 224916..225086 /locus_tag="Acear_0216" /db_xref="GeneID:9512218" CDS 224916..225086 /locus_tag="Acear_0216" /note="KEGG: cdf:CDP09 hypothetical protein; PFAM: Ribbon-helix-helix protein, copG family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826832.1" /db_xref="GI:302391012" /db_xref="GeneID:9512218" /translation="MSLKNRTKIGTTLDNDVNEKLEKLHQATNIPKSKLFDEAIEDLY KKYRENFNFQID" misc_feature 224928..225059 /locus_tag="Acear_0216" /note="Ribbon-helix-helix domain; Region: RHH_3; pfam12651" /db_xref="CDD:193128" gene complement(225169..226218) /locus_tag="Acear_0217" /db_xref="GeneID:9512219" CDS complement(225169..226218) /locus_tag="Acear_0217" /EC_number="5.3.1.8" /note="COGs: COG1482 phosphomannose isomerase; InterPro IPR001250:IPR014710:IPR011051:IPR014628; KEGG: hor:Hore_21530 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; PRIAM: Mannose-6-phosphate isomerase; SPTR: B8D0G2 Mannose-6-phosphate isomerase, class I; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I" /codon_start=1 /transl_table=11 /product="mannose-6-phosphate isomerase, type 1" /protein_id="YP_003826833.1" /db_xref="GI:302391013" /db_xref="GeneID:9512219" /translation="MFYPLKFKPIYKEKIWGGNRLAAQFDRNLPADRIGESWELAAHK NGTSIISNGYFKGESLPELIDKYWTEIMGQKIKRSDYDKFPLLIKLLDANDKLSVQVH PDDEYAAKYRIGDSGKNELWYIIDAKPKAELIYDLQPEVTKEELAASIETGQVIDKLK SIPVESGDVIFIPAGTVHSIKEGILLAEIQQNSDTTYRIYDWNRVDNNGQPRKLNIKE ALKAIDFSRKSHAKCQSIKLKEDNYQREILSISEHFITEKIKVKDSFTAEPVKKRFEV LLPLAGQAIINYNQGTLKVSRGETVLIPACLDSYQLEGEIEVLRIYIVSDIDKFAARL AADGIAETKIDEITF" misc_feature complement(225253..226212) /locus_tag="Acear_0217" /note="Phosphomannose isomerase [Carbohydrate transport and metabolism]; Region: ManA; COG1482" /db_xref="CDD:31671" misc_feature complement(225268..226209) /locus_tag="Acear_0217" /note="mannose-6-phosphate isomerase; Provisional; Region: PRK15131; cl14659" /db_xref="CDD:189265" gene 226392..228518 /locus_tag="Acear_0218" /db_xref="GeneID:9512220" CDS 226392..228518 /locus_tag="Acear_0218" /note="COGs: COG2385 sporulation protein and related protein; InterProIPR001440:IPR013105:IPR013693:IPR011990:IPR 019734:IPR013026:IPR013486; KEGG: hor:Hore_10950 SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; hypothetical protein; TPR repeat-containing protein; SPTR: B8CX30 SpoIID/LytB domain protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; Tetratricopeptide repeat; TIGRFAM: SpoIID/LytB domain" /codon_start=1 /transl_table=11 /product="SpoIID/LytB domain protein" /protein_id="YP_003826834.1" /db_xref="GI:302391014" /db_xref="GeneID:9512220" /translation="MTKDKKKLYLLVIGVVFCLVTFTVTFVFKAENHDITTAKQHNLD KLEEKARTEYYNGAYRESIKLYQEVLEKSSARIDTRKNLAVVYETVGDYKSAVNQYEA VLSTDSDEHSVYYDLGELYYSLGKYNQALKNTKQAVEYIENEAILKLAYLKLAQIHKE RSDYHLALSAVKQALKLDPDSAVAYYYSGQIKDRLDQLQEAVADYKQALNKDGSFVEA QLDLADDYFKLEKYKEAKKLYKKILERNGEFKIAQTRLDRIEEIKPDLFKTEAGEERS KEETREELLNKEVTFAQIEPIEAKDSLSQVRIGLADGREYLAFRAASEFVIKDKASKK VLFTGAAQIPWQLEIMDTGEIGLFNKSGQLKEKLTAPVAIETKQDEAPILLHNIDYGQ GYYWAGKEDRQYRGQIEINPNQDTFTVVNPVNLEAYLYSVVPSEMSASWPIEALKVQA VAARSYTLFHLGKHGYEGYDLCSTVHCAAYGGITKEHPRTIQAVDETRGEILTYNGRP INAVYSANSGGRTESSAAVWGGEVPYLQGASTALASLGEENLQQKFPFEPYQLQKWLS TAPKSYSDHLEYGRANRYRWQRVIRADEIAAKLDIGKVKKLVPTARAEGGTVEAIKVV GATGEEIIDRGLRSFFGGLRSSRFIVQTEYGSDGLADNFIFYGSGWGHNVGMDQVATA NMAHSGYSYDEILLHFYTGVNLTSKY" misc_feature 226521..226820 /locus_tag="Acear_0218" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature order(226521..226526,226530..226535,226542..226547, 226632..226637,226641..226646,226653..226658, 226734..226739,226746..226751,226758..226763) /locus_tag="Acear_0218" /note="binding surface" /db_xref="CDD:29151" misc_feature order(226539..226541,226575..226577,226587..226589, 226596..226598,226641..226643,226677..226679, 226689..226691,226698..226700,226743..226745, 226779..226781,226791..226793,226800..226802) /locus_tag="Acear_0218" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature 226728..227027 /locus_tag="Acear_0218" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature order(226728..226730,226734..226739,226746..226751, 226845..226850,226854..226859,226866..226871, 226947..226952,226959..226964,226971..226976) /locus_tag="Acear_0218" /note="binding surface" /db_xref="CDD:29151" misc_feature order(226743..226745,226779..226781,226791..226793, 226800..226802,226854..226856,226890..226892, 226902..226904,226911..226913,226956..226958, 226992..226994,227004..227006,227013..227015) /locus_tag="Acear_0218" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature 227622..228509 /locus_tag="Acear_0218" /note="Stage II sporulation protein; Region: SpoIID; cl07201" /db_xref="CDD:164094" misc_feature 227643..228509 /locus_tag="Acear_0218" /note="SpoIID/LytB domain; Region: SpoIID_LytB; TIGR02669" /db_xref="CDD:162968" gene 228675..230030 /locus_tag="Acear_0219" /db_xref="GeneID:9512221" CDS 228675..230030 /locus_tag="Acear_0219" /note="COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR004013:IPR016195:IPR003141; KEGG: hor:Hore_11830 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: B8CXB4 PHP domain protein; PFAM: PHP domain" /codon_start=1 /transl_table=11 /product="PHP domain protein" /protein_id="YP_003826835.1" /db_xref="GI:302391015" /db_xref="GeneID:9512221" /translation="MRNVDLHLHTTASDGSYTPEELVEKAVGMGLETIAVTDHDTVGG VAPALTAAKEVDLEVIPGVEFTTYVGQEEVHILGYYFDYLDQNFLMELTKLKEARENR GKKIVEKLNKLGLELEWKSVIEVAGSGAVGRPHIARALVNEGYVADVSAAFEDYLGDR GPAYVPKTQLTPQDAIEAINEAGGVAVLAHPGHLSTNELIVEIIEAGIDGIEAYYSGH DEEETKQYIKLANRYDLIITGGSDCHGPKIKEGILLGTVDIPDNVIDNLKVAYRNRYN IESIDFKKYLKVYPETSGLYPEKLQEIGEKYHDKGYLTKEELYELAYLNSTRSSYHVK KNSPDRVKKITEIVYNLADEFSQLTLLTGLLGVGIPTASAILTSLDEASHTVIDTRVW ATLYQMGYFDTKKESFSADDYIRIINIVRRLANETDLTTAEIGYALFAYDVEHREGTL H" misc_feature 228675..229412 /locus_tag="Acear_0219" /note="Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only]; Region: COG0613" /db_xref="CDD:30958" misc_feature 228687..228875 /locus_tag="Acear_0219" /note="DNA polymerase alpha chain like domain; Region: POLIIIAc; smart00481" /db_xref="CDD:128757" gene 230102..231184 /locus_tag="Acear_0220" /db_xref="GeneID:9512222" CDS 230102..231184 /locus_tag="Acear_0220" /note="COGs: COG2206 HD-GYP domain; InterPro IPR006674:IPR003607; KEGG: hmo:HM1_0199 metal dependent phosphohydrolase domain protein, PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: B0TDV5 Metal dependent phosphohydrolase domain protein, PFAM: HD domain" /codon_start=1 /transl_table=11 /product="metal dependent phosphohydrolase" /protein_id="YP_003826836.1" /db_xref="GI:302391016" /db_xref="GeneID:9512222" /translation="MRKVLTEDLKAGMKVAKPLYLADGTVLLNAGVTLKESYIQQLKE RNIPALFIIDEDLPDVEVPEMISDQTRLQATQTLQECMNDISLGNQFNARKVKKAVNN IVDELTSKRHVVVHLNDIRSYDDYTFGHSVNVTSLAILTGMSMGYNKLELRDLGIGAL LHDVGKITVDEDILLKSEGLTDEEFAEVQKHARRGYEIVRETDGISSCSAHIAFQHHE RINGSGYPRGLTGDEMLEFAQIVAVVDVYDAITCDRVYRDALEPHEALEILEDMMQAK LNHEIVQVFFENVAIYPIGTLVELSTGQIGIVVDVNKEDLSSPVVRLIKEDDDVEIEE IDLMHNEGIEIADVITDSKRDEYINT" misc_feature 230108..231067 /locus_tag="Acear_0220" /note="c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]; Region: COG2206" /db_xref="CDD:32388" misc_feature 230474..230908 /locus_tag="Acear_0220" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature order(230489..230491,230585..230590,230834..230836) /locus_tag="Acear_0220" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature 230588..230590 /locus_tag="Acear_0220" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene 231212..231808 /locus_tag="Acear_0221" /db_xref="GeneID:9512223" CDS 231212..231808 /locus_tag="Acear_0221" /note="COGs: COG0241 Histidinol phosphatase and related phosphatase; InterPro IPR005834:IPR006543:IPR006549; KEGG: gsu:GSU2084 HAD superfamily hydrolase; PFAM: haloacid dehalogenase; SPTR: Q74BF7 Hydrolase, HAD-superfamily; TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; histidinol-phosphate phosphatase family protein; PFAM: polynucleotide kinase 3 phosphatase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; D,D-heptose 1,7-bisphosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain" /codon_start=1 /transl_table=11 /product="hydrolase, HAD-superfamily, subfamily IIIA" /protein_id="YP_003826837.1" /db_xref="GI:302391017" /db_xref="GeneID:9512223" /translation="MKDLADIAVFMDRDGTVSKEIGYVNHGDRFELLPRTSAAVKLLN NVGIKAILATNQAGVARGYFPEERINEVHDKLKQLLAEDEAYLDAIYYCKHHPDVGEG EYNKDCNCRKPKPGMLKEAAKDFDLDLEESYMIGDKISDIEMAKRVGATGILVLTGYG QGVYEYEQQDWPVEPDYIADDLFDAVDWILKEQGIWKR" misc_feature 231233..231676 /locus_tag="Acear_0221" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature 231233..231658 /locus_tag="Acear_0221" /note="haloacid dehalogenase-like hydrolase; Region: Hydrolase; pfam00702" /db_xref="CDD:189678" misc_feature order(231245..231253,231371..231376) /locus_tag="Acear_0221" /note="active site" /db_xref="CDD:119389" misc_feature 231245..231262 /locus_tag="Acear_0221" /note="motif I; other site" /db_xref="CDD:119389" misc_feature 231371..231373 /locus_tag="Acear_0221" /note="motif II; other site" /db_xref="CDD:119389" gene 231796..232782 /locus_tag="Acear_0222" /db_xref="GeneID:9512224" CDS 231796..232782 /locus_tag="Acear_0222" /note="COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR011611; KEGG: hor:Hore_16505 Rfae domain I; PFAM: PfkB domain protein; SPTR: B8CYN1 Rfae domain I; PFAM: pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain I" /codon_start=1 /transl_table=11 /product="PfkB domain protein" /protein_id="YP_003826838.1" /db_xref="GI:302391018" /db_xref="GeneID:9512224" /translation="MEEIVSYLSRFSQQKILVVGDIIADEFIEGEPERISREAPVLIL NQNDRSVLPGGGTNAANNVAALEGQVYLAGVIGDDDLGIQLKEYLTGQNIKTDGLIVD QTRPTSVKTRILAGGGQTVKQQVVRVDRLKRSNIDSEIEDKLLEYIEEILPKMDAVIL SDYGNGVLTPRVKREVIRLGNEAGKIIAVDSRYELLSFKNITVATPNKEETEEALGIK LDSKEKIDEAGRRLLEEMEADSMLITLGGEGMAFFNQAGLKKHIPAVNYTEVFDVTGA GDTVIGTLVLALASDADSVSAMRLANHAAGIVIRKAGVATTSCEEMKKYLTE" misc_feature 231838..232758 /locus_tag="Acear_0222" /note="RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer...; Region: RfaE_like; cd01172" /db_xref="CDD:29356" misc_feature order(231856..231858,231862..231864,231955..231960, 231967..231969,232024..232026,232030..232032, 232618..232620,232624..232629) /locus_tag="Acear_0222" /note="putative ribose interaction site [chemical binding]; other site" /db_xref="CDD:29356" misc_feature order(232414..232416,232423..232425,232525..232527, 232531..232533,232588..232590,232597..232599, 232702..232704,232708..232710,232720..232722) /locus_tag="Acear_0222" /note="putative ADP binding site [chemical binding]; other site" /db_xref="CDD:29356" gene 232798..233268 /locus_tag="Acear_0223" /db_xref="GeneID:9512225" CDS 232798..233268 /locus_tag="Acear_0223" /note="COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR004820:IPR014729:IPR011914:IPR004821; KEGG: hor:Hore_16500 RfaeE domain II; PFAM: cytidylyltransferase; SPTR: B8CYN0 RfaeE domain II; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: rfaE bifunctional protein, domain II; cytidyltransferase-related domain" /codon_start=1 /transl_table=11 /product="rfaE bifunctional protein" /protein_id="YP_003826839.1" /db_xref="GI:302391019" /db_xref="GeneID:9512225" /translation="MLKKVTALSDLKEILQDKTDEEIVFTNGCFDILHVGHIRYLQEA KAKGDFLVVGINSDKSVQQLKGKKRPIVPEMERAEMLAALEMIDYVVIFAEVTAKSII SELKPDIYVKGGDYKIDELPEAEVVAEYGGRIELVKEVKGASTTNIVAEISERY" misc_feature 232858..233259 /locus_tag="Acear_0223" /note="nucleotidyl transferase superfamily; Region: nt_trans; cl00015" /db_xref="CDD:193613" misc_feature order(232897..232908,233224..233235) /locus_tag="Acear_0223" /note="active site" /db_xref="CDD:173912" misc_feature order(232897..232899,232906..232908,233227..233229) /locus_tag="Acear_0223" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:173912" misc_feature 232897..232908 /locus_tag="Acear_0223" /note="HIGH motif; other site" /db_xref="CDD:173912" misc_feature 233224..233235 /locus_tag="Acear_0223" /note="KMSKS motif; other site" /db_xref="CDD:173912" gene complement(233310..233585) /locus_tag="Acear_0224" /db_xref="GeneID:9512226" CDS complement(233310..233585) /locus_tag="Acear_0224" /note="KEGG: hor:Hore_00370 uncharacterized protein family (UPF0180); SPTR: B8D044 Uncharacterized protein family (UPF0180); PFAM: Uncharacterised protein family (UPF0180)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826840.1" /db_xref="GI:302391020" /db_xref="GeneID:9512226" /translation="MKNKGKKKVAVEEGLSEVAQELKKSGFEVATLGANATAKGDTDT TQKADAVIVNGQNQEAVKTANEIQGKVINAKNLSPNQVKEEVKNKVK" misc_feature complement(233343..233567) /locus_tag="Acear_0224" /note="Uncharacterised protein family (UPF0180); Region: UPF0180; cl04214" /db_xref="CDD:186621" gene 233759..235705 /locus_tag="Acear_0225" /db_xref="GeneID:9512227" CDS 233759..235705 /locus_tag="Acear_0225" /note="COGs: COG0840 methyl-accepting chemotaxis protein; InterPro IPR004010:IPR003660:IPR004089:IPR004090; KEGG: bbe:BBR47_16050 probable methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: C0Z9B2 Probable methyl-accepting chemotaxis protein; PFAM: Cache domain; HAMP domain; methyl-accepting chemotaxis protein (MCP) signaling domain; Tar ligand binding domain homologue" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer" /protein_id="YP_003826841.1" /db_xref="GI:302391021" /db_xref="GeneID:9512227" /translation="MGKICQFFNNSIRNRLIILLLVIGLVPVAVMSYFQVTETKETLE DNFVDSTTKEIKQVDNAINLYFDTVKRNCEMLAADSTVQQADESITSYLNKTKEENLN LTPVENGGVETEIYKEYLHFAETHPNAAYVYMATTDGGYIQWPANSVPKNYNPAERSY YKEAMQNKDQVIRTSPYYWSADDAVIVSTATTIEDDTGEIIGVQGLDVSLKGLTEMVK NISVGDTGYIIMTTADGTILAHPKKPELNFKNIEKLGINKLNNISQIEDKEFTTAMDG REYLMNLYTSSETGWKFIAVIEKSEIDSQIGALYRKIGLIALICVVIIIIAAGIISKR FTQPITAATRFAKEIAKGNLNAAPLESNSQDEVADLIQALEKMRHKLKDMLTSLVDTI EDLSAYSQELSASSQEGNAVIEQNTENIEEMASSIQEISASSQEVTGLAQETDSQAEE GKEKIDELTNVEKVNRVVNNAVESIQELNANSKEIGKIVELISDIAEQTNLLALNAAI EAARAGEDGRGFAVVAEEIRELAEETNQATAEIAELIQDTQNKSQVSLEAVQQMENKV QDRKEFLRETNEAFTKIKQKIEDTSAHIQQTAASAQNLAENSEQMQQASEDMRNMSQE VTNSSQELAKMAQELQEVVEQFNI" misc_feature 234278..234487 /locus_tag="Acear_0225" /note="Cache domain; Region: Cache_1; pfam02743" /db_xref="CDD:145738" misc_feature <234752..234907 /locus_tag="Acear_0225" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 234938..235696 /locus_tag="Acear_0225" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 235100..235702 /locus_tag="Acear_0225" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 236002..237673 /locus_tag="Acear_0226" /pseudo /db_xref="GeneID:9512228" gene 237692..239407 /locus_tag="Acear_0227" /db_xref="GeneID:9512229" CDS 237692..239407 /locus_tag="Acear_0227" /note="COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR017900:IPR000283:IPR001041:IPR019574:IPR 001450:IPR004108:IPR003149:IPR009016:IPR017896:IPR013352; KEGG: hor:Hore_02980 NADH dehydrogenase I subunit G; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; SPTR: B8D1I2 NADH dehydrogenase I subunit G; TIGRFAM: hydrogenase, Fe-only; PFAM: Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenases, Fe-only" /codon_start=1 /transl_table=11 /product="NAD(P)-dependent iron-only hydrogenase catalytic subunit" /protein_id="YP_003826842.1" /db_xref="GI:302391022" /db_xref="GeneID:9512229" /translation="MIKLKINNEEIEVEEGTTILKAAEELGYKIPTLCYQEDLSITGS CRICVVEIKGQQKLVPSCATAVEEGMEIITNSEEVKQVRRDIFELIIANHPFDCKLNC LTCARHGDCELQEVAQVIGVEEIEYEFIEKEWDTDTTSPSVMRENTKCITCGRCVKTC EEIQHAGVLTLTNRGPATEVSTFMDKGMGNVDCTNCGQCLTACPTGAIHEVYRINEVI SALHDPDKHVVVQTAPAVRVALGEEFDMESGINTEGKMVTAMKKMGFDKVFDTNFTAD LTIMEEGFEFIDRLKNDGPLPLITSCSPGWIKFAEHNYSDLLDNISSCKSPQQMFGAL TKSFYPEKVDVDPADVVSVSIMPCTAKKFEAEREEMTDTGYQDVDHVLTTRELAEMIK EYGLNFVNLKEEEYDDPFGISTGAAVIFGATGGVMEAALRTAYEVLTEEELGNVDLEM VRGFEGIKEAEVDINGQTVKVAVASGLENAHQLLKHKDDYHFIEIMACPGGCLNGGGQ PISNDSDVLEKRREGLYNTDKEREFRKSHENPAIQKLYDDYLEEPLSEVSHKYLHTHY HKREE" misc_feature 237695..238390 /locus_tag="Acear_0227" /note="bidirectional hydrogenase complex protein HoxU; Validated; Region: PRK07569" /db_xref="CDD:181037" misc_feature 237695..237907 /locus_tag="Acear_0227" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature order(237779..237784,237791..237793,237818..237820, 237824..237835,237872..237877) /locus_tag="Acear_0227" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature order(237791..237793,237824..237826,237833..237835, 237875..237877) /locus_tag="Acear_0227" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" misc_feature 237938..>238045 /locus_tag="Acear_0227" /note="NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Region: NADH-G_4Fe-4S_3; pfam10588" /db_xref="CDD:192636" misc_feature 238115..239224 /locus_tag="Acear_0227" /note="hydrogenase, Fe-only; Region: Fe_only_hydrog; TIGR02512" /db_xref="CDD:162896" misc_feature 238331..239218 /locus_tag="Acear_0227" /note="Iron only hydrogenase large subunit, C-terminal domain; Region: Fe_hyd_lg_C; pfam02906" /db_xref="CDD:190471" misc_feature 239225..239401 /locus_tag="Acear_0227" /note="Iron hydrogenase small subunit; Region: Fe_hyd_SSU; pfam02256" /db_xref="CDD:190260" gene 239760..240899 /locus_tag="Acear_0228" /db_xref="GeneID:9512230" CDS 239760..240899 /locus_tag="Acear_0228" /EC_number="2.7.13.3" /note="COGs: COG4585 Signal transduction histidine kinase; InterProIPR008595:IPR011712:IPR003594:IPR005467:IPR 016381; KEGG: hor:Hore_21830 histidine kinase; PFAM: Sensor DegS domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; PRIAM: Histidine kinase; SMART: ATP-binding region ATPase domain protein; SPTR: B8D0J3 Histidine kinase; PFAM: Histidine kinase; Sensor protein DegS; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /codon_start=1 /transl_table=11 /product="Histidine kinase" /protein_id="YP_003826843.1" /db_xref="GI:302391023" /db_xref="GeneID:9512230" /translation="MTEELSVDSLDQVVEKILIKIENSQNEVFEIAETARQEYEATKQ DLQEIRDETAETIQKVDQLRLKNQRTRRELMEVSRDLNNYDEETIKEAYEEAKEVQVE LSLLQEKEKRLRKKRDELERRLQELEQTVERAEDLVSQIGIVKDYLTNDLQKFSTQVE ELKQKEELGIRIIEAQEEERKRVAREIHDGPAQSMANVVFKLEYSEKLLEKDLDQAKE ELNELKGLVKQSLQDVRKIIFDLRPMSLDDLGLVPTLKQYIEDFIDKTGLEVELTVIA NEADLKSSYEVAIYRIIQEALNNVHQHAQAKQVDVKLELRSEVVNVVVSDDGCGFNVE EVLNTADDDSYGLLSMKERAELLQGSVEFSSQSGRGTKVKLRIQL" misc_feature 239790..240266 /locus_tag="Acear_0228" /note="Sensor protein DegS; Region: DegS; pfam05384" /db_xref="CDD:147523" misc_feature 240294..240497 /locus_tag="Acear_0228" /note="Histidine kinase; Region: HisKA_3; pfam07730" /db_xref="CDD:191831" misc_feature 240624..240890 /locus_tag="Acear_0228" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(240642..240644,240654..240656,240663..240665, 240729..240731,240735..240737,240741..240743, 240747..240752,240795..240800,240846..240848, 240852..240854,240867..240872,240876..240878) /locus_tag="Acear_0228" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 240654..240656 /locus_tag="Acear_0228" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(240741..240743,240747..240749,240795..240797) /locus_tag="Acear_0228" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene 240912..241100 /locus_tag="Acear_0229" /db_xref="GeneID:9512231" CDS 240912..241100 /locus_tag="Acear_0229" /note="InterPro IPR007047; KEGG: nth:Nther_2323 Flp/Fap pilin component; PFAM: Flp/Fap pilin component; SPTR: B2A8K4 Flp/Fap pilin component; PFAM: Flp/Fap pilin component" /codon_start=1 /transl_table=11 /product="Flp/Fap pilin component" /protein_id="YP_003826844.1" /db_xref="GI:302391024" /db_xref="GeneID:9512231" /translation="MLNILKRLLTEEDGQGMVEYGLILALIAVAVVAALTTMGEDLTT LFENITDDLGVGGGGSDG" gene 241406..241888 /locus_tag="Acear_0230" /db_xref="GeneID:9512232" CDS 241406..241888 /locus_tag="Acear_0230" /note="InterPro IPR000045; KEGG: nth:Nther_2321 peptidase A24A prepilin type IV; PFAM: peptidase A24A prepilin type IV; SPTR: B2A8K2 peptidase A24A prepilin type IV; PFAM: type IV leader peptidase family" /codon_start=1 /transl_table=11 /product="peptidase A24A prepilin type IV" /protein_id="YP_003826845.1" /db_xref="GI:302391025" /db_xref="GeneID:9512232" /translation="MNILLGIILAVAMWIDIKDKIIPNWLTFSLMLLGLIINLSIDGW SGLLFSLQGLGVGLAIFLIPFVLGGLGAGDVKLVAGIGAVKGVKFVLLDSLVIAIVGG IISLFILIQEKKLGRMIKKVIYRLPFKSLSDREDQEGNDAFPYGVAVAFGTWYTLFLH " misc_feature 241412..241723 /locus_tag="Acear_0230" /note="Type IV leader peptidase family; Region: Peptidase_A24; cl02077" /db_xref="CDD:154734" gene 241923..242315 /locus_tag="Acear_0231" /db_xref="GeneID:9512233" CDS 241923..242315 /locus_tag="Acear_0231" /note="InterPro IPR012495; KEGG: pth:PTH_1447 flp pilus assembly protein TadG; PFAM: TadE family protein; SPTR: A5D2B3 Flp pilus assembly protein TadG; PFAM: TadE-like protein" /codon_start=1 /transl_table=11 /product="TadE family protein" /protein_id="YP_003826846.1" /db_xref="GI:302391026" /db_xref="GeneID:9512233" /translation="MQLIRRRRGQALVELALVLPVLLLILFGIVEFGRIFHAYLVIAN AARVGAREGAITNDDTDIKDAVRTAADHSLDLNRLSIAISPDPANRNKGDSLTVEVDY DVEVFAPIIAQLVPDPFPINSTMVMRIE" misc_feature 241926..>242225 /locus_tag="Acear_0231" /note="Flp pilus assembly protein TadG [Intracellular trafficking and secretion]; Region: TadG; COG4961" /db_xref="CDD:34568" misc_feature <242001..242075 /locus_tag="Acear_0231" /note="TadE-like protein; Region: TadE; pfam07811" /db_xref="CDD:191859" gene 242337..243260 /locus_tag="Acear_0232" /db_xref="GeneID:9512234" CDS 242337..243260 /locus_tag="Acear_0232" /note="InterPro IPR018705; KEGG: pth:PTH_1448 flp pilus assembly protein TadD; PFAM: protein of unknown function DUF2134, membrane; SPTR: A1HPR7 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826847.1" /db_xref="GI:302391027" /db_xref="GeneID:9512234" /translation="MSLINSQKGTVIVVVALMMTVFISFLALVIDIGSLYLERIRLVN TLDAAALAGVQDLPDDSQQAETVALDYASRNGLDNNVTVEITDDDHQIGLSGSKQVGM NFAVIFGIDQVEVAASSKARVGHVTAVTGAVPFGVVSQNFVYGDKYYLKYGAGGDEVA SGRNGNFGALALGGTGANNYEDNIKYGYDSSLEVGQDVTTEPGNMAGPTTRGVEYRMD QSRTVPACSYDSVEADCPRLVMVPVIDELGKGRSTSTIVGFAAFFLEGLTNEQGNNAY VEGRFISWLTESGKLGSEGEDFNLRTVELIE" misc_feature 242355..>242588 /locus_tag="Acear_0232" /note="Predicted membrane protein [Function unknown]; Region: COG4655" /db_xref="CDD:34274" gene 243284..244120 /locus_tag="Acear_0233" /db_xref="GeneID:9512235" CDS 243284..244120 /locus_tag="Acear_0233" /note="COGs: COG3745 Flp pilus assembly protein CpaB; InterPro IPR013974:IPR017592; KEGG: pth:PTH_1449 flp pilus assembly protein CpaB; PFAM: SAF domain protein; SPTR: A5D2B5 Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB" /codon_start=1 /transl_table=11 /product="Flp pilus assembly protein CpaB" /protein_id="YP_003826848.1" /db_xref="GI:302391028" /db_xref="GeneID:9512235" /translation="MNFKVVIVIAVILGLITSGAVYFMMDNMQQEAVKEQPKASVVVA KQNIEPREQITRSKVQLKQVPQETVHSQAVTSISQAVEKFALKDIISGEQLLKPRLLG KEEVSSGLAFNLADDKRAVTVPVTEVSGVAGFLTPGDYVDVVSVFSTYEAQQTVAKTV LQKVKVLAVAQDMVRERDQKPKVTKSVTLGVGLAEAEKLVLADRKGEIRLVLRSAQNE SFSMSNGVKFEELVGNLEEEGTDNKEQIADKDINQKSSSQDQEGIEVIRGSERSYQKV SP" misc_feature 243338..244099 /locus_tag="Acear_0233" /note="SAF domain; Region: SAF; cl00555" /db_xref="CDD:193866" gene 244141..245385 /locus_tag="Acear_0234" /db_xref="GeneID:9512236" CDS 244141..245385 /locus_tag="Acear_0234" /note="COGs: COG4964 Flp pilus assembly protein secretin CpaC; InterPro IPR007055:IPR004846:IPR001775:IPR001814; KEGG: sfu:Sfum_1493 type II and III secretion system protein; PFAM: type II and III secretion system protein; transport-associated; SPTR: A1HPR1 type II and III secretion system protein; PFAM: Bacterial type II and III secretion system protein" /codon_start=1 /transl_table=11 /product="type II and III secretion system protein" /protein_id="YP_003826849.1" /db_xref="GI:302391029" /db_xref="GeneID:9512236" /translation="MQLKKKIIISIIVICSLLFISSGLLAHKSQQKILQLGTGKSELL KVVDLERAAVADPEVADIVTISQEELLINGKSEGTTTLHLWDQKGHRSYQVEVYKEEA RVIKQIKELIGTDTVKVAKVEENIILSGKVRDQTQLQRVKKIAGVFGEKVINELQVTN SLQVLLAAQVFEIDKAVSEELGFDWYSTNSGGVESGTATLGETTTSRFGIGHYERLYQ LRTKLKALIEDGKAKLLAKPKLVTKSGQKASFNVGGEIPVVTADSSGEQTVVWKNYGV QFEVEPTVTPTGKLETYLHPKVSQLDWANAVDYGNSGQLPAIKSSEVKTQVVIKDGAA LAIGGLLQQYRSEDIKRIPLLSQLPILGELFKSKSFREEKSELIILVTPKIIASESDS REAMEMEETLEKKENEGSKRGE" misc_feature 244234..245298 /locus_tag="Acear_0234" /note="Flp pilus assembly protein, secretin CpaC [Intracellular trafficking and secretion]; Region: CpaC; COG4964" /db_xref="CDD:34571" misc_feature 244813..245298 /locus_tag="Acear_0234" /note="Bacterial type II and III secretion system protein; Region: Secretin; cl02829" /db_xref="CDD:164025" gene 245388..246605 /locus_tag="Acear_0235" /db_xref="GeneID:9512237" CDS 245388..246605 /locus_tag="Acear_0235" /note="COGs: COG4963 Flp pilus assembly protein ATPase CpaE; InterPro IPR001789:IPR011006:IPR003593; KEGG: drm:Dred_2115 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; AAA ATPase; SPTR: A1HPR2 Response regulator receiver protein; PFAM: Response regulator receiver domain; CobQ/CobB/MinD/ParA nucleotide binding domain" /codon_start=1 /transl_table=11 /product="response regulator receiver protein" /protein_id="YP_003826850.1" /db_xref="GI:302391030" /db_xref="GeneID:9512237" /translation="MEDQIEILLADDIAETRANIKKLINLEKNLEVVAEAVDGKDVIE QAKEIKPDIILMDINMPKIKGIKATEIITREVPETSIIMMSVQEEQDYLRKAMVAGAR EYLIKPFSDDELITAINQVYDLEVERKSSLKQSREETEEAVEEKTISIFSSKGGVGKT LLATNLAVYLQQNKKGDVVLVDLDLQFGDLDVLLDLTPRITIADAVDELDNLNVQNID DYLLSYENGLQVLASPLRPEEAEMINGEQIKKLLSILSEKFNYVIIDTAQSFSEHILA ALDNSELILLIAMLDLSTIRNVRLCLEVMEELEYPEESIKLILNRYSKDIGISIEDLE ENLNYSVDIKIPSNGSLTIDSINQGVPFILEEPRAKISKQLIKLTDLVTGEELKPEDK EGWFNKITDFLNN" misc_feature 245406..245744 /locus_tag="Acear_0235" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature 245409..245750 /locus_tag="Acear_0235" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(245418..245423,245556..245558,245580..245582, 245640..245642,245697..245699,245706..245711) /locus_tag="Acear_0235" /note="active site" /db_xref="CDD:29071" misc_feature 245556..245558 /locus_tag="Acear_0235" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(245565..245570,245574..245582) /locus_tag="Acear_0235" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 245706..245714 /locus_tag="Acear_0235" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature <245823..246539 /locus_tag="Acear_0235" /note="Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion]; Region: CpaE; COG4963" /db_xref="CDD:34570" misc_feature 245829..>245987 /locus_tag="Acear_0235" /note="This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly...; Region: CpaE_like; cd03111" /db_xref="CDD:73340" misc_feature <246168..246350 /locus_tag="Acear_0235" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" gene 246619..247995 /locus_tag="Acear_0236" /db_xref="GeneID:9512238" CDS 246619..247995 /locus_tag="Acear_0236" /note="COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR017975:IPR001482; KEGG: pth:PTH_1451 type IV secretory pathway, VirB11 components, and related ATPase; PFAM: type II secretion system protein E; SPTR: A1HPR8 type II secretion system protein E; PFAM: type II/IV secretion system protein" /codon_start=1 /transl_table=11 /product="type II secretion system protein E" /protein_id="YP_003826851.1" /db_xref="GI:302391031" /db_xref="GeneID:9512238" /translation="MSLKERLSQQKEQEIEPGSETEAANTKTSASTLEEDPYRGLKTK IHNHLLNELELEVLSEDKKEAEDQQLKQDIKDLTQEVIEAEEVHISPGDRRKVIQDII DEIIGFGPINGLLEDPEVTEVMVNGPDQVYVERDGKLVLTDVRFRDDEHVIHIIEKIV APLGRRIDESSPMVDARLPDGSRVNAIIPPLALNGPTITIRKFAEDPFTVEDLIGFGT MTEEMAQFLEACVEVRLNIVVAGGTGSGKTTTLNVLSSFIPEEERIVTIEDAAELQLV QDHVVSLETRPPNVEGKGAVTMRELVKNSLRMRPDRIVVGEVRGGEALDMLQAMNTGH DGSLTTGHANSPRDMLSRLETMVMMAGMELPVKAIRDQIASAVDLIVHQSRLRDGSRK IVKVTEVQGMEGEIITLQDIFSFEQEGFDNAGNVQGELKATGIRPKFFDRFKAEGIDL PSDIFMAY" misc_feature 246823..247881 /locus_tag="Acear_0236" /note="Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion]; Region: CpaF; COG4962" /db_xref="CDD:34569" misc_feature 247246..247812 /locus_tag="Acear_0236" /note="Type IV secretory pathway component VirB11, and related ATPases. The homohexamer, VirB11 is one of eleven Vir proteins, which are required for T-pilus biogenesis and virulence in the transfer of T-DNA from the Ti (tumor-inducing) plasmid of bacterial...; Region: VirB11-like_ATPase; cd01130" /db_xref="CDD:29996" misc_feature order(247255..247257,247348..247365,247789..247791) /locus_tag="Acear_0236" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29996" misc_feature order(247339..247344,247354..247362) /locus_tag="Acear_0236" /note="Walker A motif; other site" /db_xref="CDD:29996" misc_feature order(247345..247350,247405..247407,247429..247431, 247450..247461,247465..247470,247537..247545, 247549..247551,247588..247590,247600..247602, 247609..247614,247642..247650,247660..247662, 247669..247671,247771..247773) /locus_tag="Acear_0236" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:29996" misc_feature 247552..247569 /locus_tag="Acear_0236" /note="Walker B motif; other site" /db_xref="CDD:29996" gene 248015..248998 /locus_tag="Acear_0237" /db_xref="GeneID:9512239" CDS 248015..248998 /locus_tag="Acear_0237" /note="COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: drm:Dred_2117 type II secretion system protein; PFAM: type II secretion system F domain; SPTR: C0GKK7 type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain" /codon_start=1 /transl_table=11 /product="type II secretion system F domain protein" /protein_id="YP_003826852.1" /db_xref="GI:302391032" /db_xref="GeneID:9512239" /translation="MEIIILPAVFLVVTTAVVVSYKLLTAREAKVKERLDKYSAIEEG RIGQNTALDREEDVGERKSLKKRLLEKFNQFLTSFSLVASLEAELQKTDLPLKVSEFI IINLVSCVILGLIGILVSNNLLVPVLLLSLGLIIPYFYLKYSQKKRLDKFNEQINDSL TIISNSLKAGYSFFQALEMVAKEMPPPISEEITRVLKEMNLGASPQDALTALTDRVES DDLELVVTAVLIQRQVGGNLSEILDNISDTIRERIKIKGEIQTLTAQGRMSGLIIGLL PVGLGGMLFLISPDYMAPLFGHPLGQTMIGVGIISQILGAVLIKKIIDIEV" misc_feature <248429..248995 /locus_tag="Acear_0237" /note="Bacterial type II secretion system protein F domain; Region: GSPII_F; cl00906" /db_xref="CDD:154078" gene 249012..249932 /locus_tag="Acear_0238" /db_xref="GeneID:9512240" CDS 249012..249932 /locus_tag="Acear_0238" /note="COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: chl:Chy400_0546 type II secretion system protein; PFAM: type II secretion system F domain; SPTR: C4CP31 Flp pilus assembly protein TadC; PFAM: Bacterial type II secretion system protein F domain" /codon_start=1 /transl_table=11 /product="type II secretion system F domain protein" /protein_id="YP_003826853.1" /db_xref="GI:302391033" /db_xref="GeneID:9512240" /translation="MLLIAAVFIAVAGLTLVVGYYLSQPSKRVQNRLQKYAQLQREVL PRREELELSFWERVIRPGLQKMAVLFVKLTPLGVKDSIRKRLILAGRPFDLEAKEFLA LQGNLMAVLPGIILGGLMIAGVSLNTALMYSLIFGFAGFVIPRFLLSKKISERQKKMQ QALPDVLDLLTVSVEAGLGFDSALVRVVDKIAGPISEEFERLLQEIRMGKPRRDAMRD LGERTNVEDLTNFITAIVQADKLGVSIGKVLRVQSKQIRQKRRQRAEAQAMKAPIKML LPLVFFIFPTLFIILLGPAAIKVMNSLMGL" misc_feature <249330..>249761 /locus_tag="Acear_0238" /note="Bacterial type II secretion system protein F domain; Region: GSPII_F; cl00906" /db_xref="CDD:154078" gene 249937..250281 /locus_tag="Acear_0239" /db_xref="GeneID:9512241" CDS 249937..250281 /locus_tag="Acear_0239" /note="InterPro IPR003795; KEGG: drm:Dred_2119 hypothetical protein; PFAM: protein of unknown function DUF192; SPTR: A4J6D3 Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1430" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826854.1" /db_xref="GI:302391034" /db_xref="GeneID:9512241" /translation="MKLINRSKDIEIIGKLSKATTFWQRLVGLLGKEDISLDEGLLIT PCKIVHTFFMEFSLDLIFLDDDNRVVKLVTCLQPNRISPVVFSAVKVIELKARTDLET LVEEGDRLIILD" misc_feature 249991..250266 /locus_tag="Acear_0239" /note="Uncharacterized ACR, COG1430; Region: DUF192; cl00627" /db_xref="CDD:193890" gene 250373..251530 /locus_tag="Acear_0240" /db_xref="GeneID:9512242" CDS 250373..251530 /locus_tag="Acear_0240" /note="COGs: COG2006 conserved hypothetical protein; InterPro IPR017900:IPR007160:IPR001450:IPR017896; KEGG: nth:Nther_0318 protein of unknown function DUF362; PFAM: protein of unknown function DUF362; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B2A581 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826855.1" /db_xref="GI:302391035" /db_xref="GeneID:9512242" /translation="MVSVASISCDRYQEEVVQEAVRKAVAELGGLDSFVSPEDRVLIK PNLLGPKPPEEAVTTHPLVLKAVIELVQNTGAKPVVGESSGGFLVEESLTARAFKETG TEEVCKQLGVEMINFDRVAATEIINPGSTVDSFKLPLAVLEADFIISLPKLKTHGLTL FTGAVKNFYGVIPGLEKMEYHRRFPNVNRFMEVIVDIFELVTADFAIMDGVVGLAGDG PGSSGIPCTVGSILASADPVALDTVAAGYLGYSDSQIRYLNLAAQRGLGRADLDRIEI KGNFSQSEYKKYDLPSNAVLSHLPNFILRPLFQGLMSKPVIDQQSCTQCRTCLDSCPQ QVIIEQQDGNNTYLEIDESECSKCLCCQEVCPFDAIELKENFLFKLLRYFK" misc_feature 250379..251248 /locus_tag="Acear_0240" /note="Uncharacterized conserved protein [Function unknown]; Region: COG2006" /db_xref="CDD:32189" misc_feature 250490..251107 /locus_tag="Acear_0240" /note="Domain of unknown function (DUF362); Region: DUF362; pfam04015" /db_xref="CDD:190830" misc_feature <251312..251488 /locus_tag="Acear_0240" /note="2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family; Region: PorD_KorD; TIGR02179" /db_xref="CDD:131234" misc_feature 251414..251485 /locus_tag="Acear_0240" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" gene 251620..252288 /locus_tag="Acear_0241" /db_xref="GeneID:9512243" CDS 251620..252288 /locus_tag="Acear_0241" /note="COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR000943:IPR007627:IPR013249:IPR011991:IPR 013325:IPR013324:IPR014284:IPR016371; KEGG: hor:Hore_16490 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: B8CYM9 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma-24 subunit, ECF subfamily" /protein_id="YP_003826856.1" /db_xref="GI:302391036" /db_xref="GeneID:9512243" /translation="MGEPEQKFKSKYDEMPEQEVIDLAQNGDKLAEEYLLDNNIDIVY AKSKLFYIKGLDKDDVIQEGLVGLYKAIRDYKEQRAASFRGFAHLCVSRQLISAIKTA NRQKHMPLNTSTSIDKKLKYSKDDGGRGRTLLDVLPDDNNDPQADLVNRELVDEVTYE LRDMLTELEWNVFSSYLQAKSYKEIAQEIDGSVKTVDNALQRARRKIDELKQNLEDEV VNHA" misc_feature 251638..252270 /locus_tag="Acear_0241" /note="RNA polymerase factor sigma-70; Validated; Region: PRK08295" /db_xref="CDD:181361" misc_feature 251722..251934 /locus_tag="Acear_0241" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature 252097..252240 /locus_tag="Acear_0241" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cl01055" /db_xref="CDD:197420" gene 252707..254686 /locus_tag="Acear_0242" /db_xref="GeneID:9512244" CDS 252707..254686 /locus_tag="Acear_0242" /note="COGs: COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); InterPro IPR006935:IPR001650:IPR014001:IPR014021; KEGG: mta:Moth_0224 DEAD/DEAH box helicase-like; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: Q2RLY0 DEAD/DEAH box helicase-like; PFAM: Helicase conserved C-terminal domain; type III restriction enzyme, res subunit" /codon_start=1 /transl_table=11 /product="type III restriction protein res subunit" /protein_id="YP_003826857.1" /db_xref="GI:302391037" /db_xref="GeneID:9512244" /translation="MSGKRKIHIDYALQLQFKPTTGRRITFEVKRMKKAGCVIYLLFV KDEKFSINLAFDPKFELSYFLQTREWSPGNVKAYRLTELLPVGLANYIYRKLGSCSGQ QELQEIKQDGNLFDSLKEKLGLKKPGIEGVVANYSQQVENILAYYGLADYSQVSKVEL DYHFDFPAPDELARVQEALNGRLLFYKEIKQALGENRVKLTASLSILLQTLKLESKLE VKSGIAYRSRNDLVCRRCGQSGNLVEIDCNYCGLTDYYCANCLQMGRSRICRPLYAFQ LAEKRSSSITLSRRQEQRVDPKLEFELTAAQRDAGQELIQFISSRQAEALVWAVCGAG KTEVSFQAIAEVLTEGGQVLFAIPRKDAVIELAPRLEESFPDFEISLLHGSSENKYRA ARITVATTHQVLRFEDKFDLVVLDEMDAFPYQGSEMLKYAVYRSCRPEGKIIFMTATP GDELMAFRDHKDKLLVKIPARYHGHPVPEPELLTAELDYKQEAQQVELPEKVMKLIYR SVKKDQAQLFVFLPTRELVELAGRELQQRLPEENNHPWVEYSHAQDEARDRKRDGFCD GEYPILVSTTIMERAITVPKANVLVLFADWKSVFTVSALIQMGGRSGRSLEHPEGNVW FVGQRVTAEMRQAKSRIKSLNQEAQQKGYITEQDY" misc_feature 253226..254671 /locus_tag="Acear_0242" /note="Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]; Region: comFA; COG4098" /db_xref="CDD:33855" misc_feature 253682..254056 /locus_tag="Acear_0242" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 253700..253714 /locus_tag="Acear_0242" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 253952..253963 /locus_tag="Acear_0242" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature 254162..254551 /locus_tag="Acear_0242" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(254270..254281,254357..254362,254429..254437) /locus_tag="Acear_0242" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(254453..254455,254525..254527,254537..254539, 254546..254548) /locus_tag="Acear_0242" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene 254730..255446 /locus_tag="Acear_0243" /db_xref="GeneID:9512245" CDS 254730..255446 /locus_tag="Acear_0243" /note="COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: amt:Amet_0723 phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: A6TL80 phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain; TIGRFAM: comF family protein" /codon_start=1 /transl_table=11 /product="phosphoribosyltransferase" /protein_id="YP_003826858.1" /db_xref="GI:302391038" /db_xref="GeneID:9512245" /translation="MLDLVYPEPAKCLYCDEDNLVSDQIQLCRDCLERIDYITDNYCS KCGKLLDEGPECSTCQEHKYYFDQARAAALYSGGLVDYIHQFKYQGEQILAKPLGRLL AVCGSNFYKQEEIDVIVPVPLAVEKFKSRGFNQAYLLALEVGKYFGLSVDNRVLQRAV DTVSQSKLSPEERRKNVSNIFYCEPDKLGVVEDKEILLIDDIYTTGATVNECAKVLLR AGAESVSALTLATGRQRGDN" misc_feature 254730..255419 /locus_tag="Acear_0243" /note="Predicted amidophosphoribosyltransferases [General function prediction only]; Region: ComFC; COG1040" /db_xref="CDD:31242" misc_feature 254856..255419 /locus_tag="Acear_0243" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene 256147..256548 /locus_tag="Acear_0244" /db_xref="GeneID:9512246" CDS 256147..256548 /locus_tag="Acear_0244" /note="KEGG: nth:Nther_2239 flagellar protein; SPTR: B2A837 Flagellar protein" /codon_start=1 /transl_table=11 /product="flagellar protein" /protein_id="YP_003826859.1" /db_xref="GI:302391039" /db_xref="GeneID:9512246" /translation="MGLKNCERCGQVFASDRKEICRDCEQEVEENFGKVRDYIYDHGQ ATIPEVHEETGVSVKEIKQFIREGRLVEYDMDISVECKRCGTDIKSGDYCSDCREELS QGLASKKKKIKQDLEGETKTGKMHTRRRRDK" misc_feature 256147..256545 /locus_tag="Acear_0244" /note="flagellar operon protein TIGR03826; Region: YvyF" /db_xref="CDD:163538" gene 256861..257154 /locus_tag="Acear_0245" /db_xref="GeneID:9512247" CDS 256861..257154 /locus_tag="Acear_0245" /note="InterPro IPR007412; KEGG: swo:Swol_0190 anti-sigma-28 factor, FlgM; PFAM: Anti-sigma-28 factor FlgM family protein; SPTR: A1HT59 Anti-sigma-28 factor, FlgM; PFAM: Anti-sigma-28 factor, FlgM" /codon_start=1 /transl_table=11 /product="anti-sigma-28 factor, FlgM" /protein_id="YP_003826860.1" /db_xref="GI:302391040" /db_xref="GeneID:9512247" /translation="MKISNEQLSQVLKTYNQKKASKSNSEAKKSKNKGDKLFISSDAK EMQEAKKALESQPEVRREKVERLKKQIKTGNYNVSGEEVADKMLSRTIVDNLV" misc_feature 256963..257127 /locus_tag="Acear_0245" /note="Anti-sigma-28 factor, FlgM; Region: FlgM; cl01052" /db_xref="CDD:194019" gene 257174..257674 /locus_tag="Acear_0246" /db_xref="GeneID:9512248" CDS 257174..257674 /locus_tag="Acear_0246" /note="InterPro IPR007809; KEGG: hor:Hore_17150 hypothetical protein; PFAM: FlgN family protein; SPTR: B8CYU5 Putative uncharacterized protein; PFAM: FlgN protein" /codon_start=1 /transl_table=11 /product="FlgN family protein" /protein_id="YP_003826861.1" /db_xref="GI:302391041" /db_xref="GeneID:9512248" /translation="MVTKLIEILQAEYQIYQELYRLSEEKQEIIIDNRVEDLLEIIEE EQKEVQKIDQLEGKRIDILEKIAAKNSLQEGELSFDKLIELISEPQKSQLQEIRSDIL ELLEELQEINEINANLIRESLQLTDYTLELLTNSNIGKTNTYQKPGDKGQDSSDQQRR IIDQKV" gene 257686..260091 /locus_tag="Acear_0247" /db_xref="GeneID:9512249" CDS 257686..260091 /locus_tag="Acear_0247" /note="COGs: COG1256 Flagellar hook-associated protein; InterPro IPR001444:IPR002035:IPR010930:IPR002371; KEGG: hor:Hore_17140 flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; von Willebrand factor type A; flagellar basal body rod protein; SMART: von Willebrand factor type A; SPTR: B8CYU4 Flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein FlgK" /protein_id="YP_003826862.1" /db_xref="GI:302391042" /db_xref="GeneID:9512249" /translation="MGSTFSGIELGKRALQVQRKSLDVTGHNISNANTEGYSRQEAIH ATNRPHTIQHGTGAGQVGTGVKIDEIKRVRDEFIDGQIREETSAQGKWEVKNDALEQI ELIFNEPSDKSLRNSMDEFWNSLQELNNNPESEAVRATVRQRALSLTDTFNHLDDQLR DYRTSLNNQLKTKVNDINSYGQRIADLNAQISRIESMDQNPNDLRDKRDLLVEKLSKI TSVQTNEMDNGAVTVNIEGQSLVWQDEVSKLKTVETASSDSKFDKTVEVRWDKTNEEV NFTNGEMQGLLEARDEEVPKYVEQLDNMAQELAATFNDQHHQGYGLSDTEMTELESNV QATPSDPLDGATGKFNVVVNGSVEDSVTVNSGDGLNTIANKIDGVAKVDSFTVDNNGD GAADTLKVHSSLSGTAIDLVNTSDTEAGAVNVVQKLGLKGTGAGRDFFTGKTSEVASG STAGKADIVFVVDNTSSMDSIQEEVKDNLSNFIDTIKSKGVNDIQMGVIEYRDSNIIP KDFSGSNWTSDPDKVKATLANLDSSSGGSEEYAMQAVKDTINNYDFRSNEAGLQVKNA VLVTNEDADDEGQLSSTIDNANIEGLQVHGVYHEGTDIYGEDTSEFDNLTSSTGGESV DLSDSSWGSKLANVVGGAIGSAASSSEDNGEITAKNIDLAKAIKSEGGLAKIAAATKA SDNADSNGVNDYAGDGGNALALSQVDNKKVFSSGTADFGDYYESNISKLGVDSQRAGR MVKNQEVLTKNLKQQRDSISGVSLDEEMSKMIKYQQSYTAAAKFTSTMDEILNTLVNG IKR" misc_feature 257686..>258660 /locus_tag="Acear_0247" /note="flagellar hook-associated protein FlgK; Validated; Region: flgK; PRK07739" /db_xref="CDD:181099" misc_feature 259051..259476 /locus_tag="Acear_0247" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA_subfamily_ECM; cd01450" /db_xref="CDD:29223" misc_feature order(259051..259053,259057..259059,259117..259119, 259378..259380,259384..259386,259468..259470) /locus_tag="Acear_0247" /note="integrin inhibitor binding pocket; other site" /db_xref="CDD:29223" misc_feature order(259072..259074,259078..259080,259084..259086, 259300..259302,259396..259398) /locus_tag="Acear_0247" /note="metal ion-dependent adhesion site (MIDAS); other site" /db_xref="CDD:29223" misc_feature order(259078..259086,259090..259092,259300..259302) /locus_tag="Acear_0247" /note="integrin-collagen binding site; other site" /db_xref="CDD:29223" misc_feature order(259168..259170,259213..259218,259258..259263) /locus_tag="Acear_0247" /note="putative vWF-collagen binding site; other site" /db_xref="CDD:29223" misc_feature order(259195..259200,259204..259206,259312..259314, 259321..259323,259333..259338) /locus_tag="Acear_0247" /note="glycoprotein Ib (GpIb) binding site [polypeptide binding]; other site" /db_xref="CDD:29223" misc_feature <259639..260079 /locus_tag="Acear_0247" /note="flagellar hook-associated protein FlgK; Validated; Region: flgK; PRK07739" /db_xref="CDD:181099" misc_feature 259963..260076 /locus_tag="Acear_0247" /note="Domain of unknown function (DUF1078); Region: DUF1078; pfam06429" /db_xref="CDD:191521" gene 260184..261050 /locus_tag="Acear_0248" /db_xref="GeneID:9512250" CDS 260184..261050 /locus_tag="Acear_0248" /note="COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492:IPR001029:IPR013384; KEGG: tpd:Teth39_1783 flagellar hook-associated protein FlgL; PFAM: flagellin domain protein; SPTR: C6Q3X1 Flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein 3" /protein_id="YP_003826863.1" /db_xref="GI:302391043" /db_xref="GeneID:9512250" /translation="MRVTNGMMVNNLLGNLSDSKERLDEYNRQLSTGKKFDMPSQNPT GTVRSMDLESTISSNKQYTRNINQSLTWIKSTEGTLSHANDILHRTRELAVKGANGSL NETDRQSIADEVKELKANMKGVANTSYNGKYIFAGHKVNIKPYSDNSSKYQGDDGKII REISQGTEVKINQSGDFFEPILDRMEKLIDNLETGNIDGISNNISDLDESLDEVIKKR SEVGAKQNRLELTKNRLEDDKIKFKELLSQNEDVDIAKTIMNLKMSENVHRAALSSGA RIIQPSLTDFLR" misc_feature 260184..261047 /locus_tag="Acear_0248" /note="flagellar hook-associated protein FlgL; Validated; Region: flgL; PRK07701" /db_xref="CDD:181087" misc_feature 260250..260594 /locus_tag="Acear_0248" /note="Bacterial flagellin N-terminal helical region; Region: Flagellin_N; pfam00669" /db_xref="CDD:144315" misc_feature 260793..261044 /locus_tag="Acear_0248" /note="Bacterial flagellin C-terminal helical region; Region: Flagellin_C; pfam00700" /db_xref="CDD:144340" gene 261064..261624 /locus_tag="Acear_0249" /db_xref="GeneID:9512251" CDS 261064..261624 /locus_tag="Acear_0249" /note="KEGG: oih:OB2505 hypothetical protein; SPTR: B4BNA2 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826864.1" /db_xref="GI:302391044" /db_xref="GeneID:9512251" /translation="MKLRLEINQRLAKIGLRTTPPQTSVKQKPAEVKQKTVNGELKIE SKPVKVKIDQKKARAALNYKHYKIYGKDIAKRGKQTALKAIAEYSSQGDQLARIEKKG KPLIAQAKKNAYGDKKKVGLKWKPGPEISVTPGQQDINFEVKDLNGIKLDTEPNWPQI DLQWGKVEAYQKQKAELEIKAVDKKV" gene 261640..262074 /locus_tag="Acear_0250" /db_xref="GeneID:9512252" CDS 261640..262074 /locus_tag="Acear_0250" /note="COGs: COG1699 conserved hypothetical protein; InterPro IPR003775; KEGG: csc:Csac_1670 flagellar assembly protein FliW; PFAM: protein of unknown function DUF180; SPTR: A4XK25 Flagellar assembly factor fliW; PFAM: FliW protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826865.1" /db_xref="GI:302391045" /db_xref="GeneID:9512252" /translation="MELETTRFGKLEVDEEEIITFEDGLYGFEDNKRFTLVADEEPFF WLQSMTDPDLAFVIVEPGVFCQDYEFSLNDKVKDELQLESKAEVLVMNIVVVPENPKE MTMNLKAPIIINEKKRIAKQIILEEEEYPVKYRLFEEESISA" misc_feature 261640..262059 /locus_tag="Acear_0250" /note="FliW protein; Region: FliW; cl00740" /db_xref="CDD:186170" gene 262089..262334 /locus_tag="Acear_0251" /db_xref="GeneID:9512253" CDS 262089..262334 /locus_tag="Acear_0251" /note="COGs: COG1551 carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: hor:Hore_17090 carbon storage regulator, CsrA; PFAM: carbon storage regulator; SPTR: B8CYT9 carbon storage regulator homolog; TIGRFAM: carbon storage regulator; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA)" /codon_start=1 /transl_table=11 /product="carbon storage regulator, CsrA" /protein_id="YP_003826866.1" /db_xref="GI:302391046" /db_xref="GeneID:9512253" /translation="MLVLTRKKEESIIIDDQIEIKIVDIDGNRVKLGIDAPQKIDIHR KEIYEEIVTENKQASDIKASNLASIIKEAANQSKKGE" misc_feature 262089..262268 /locus_tag="Acear_0251" /note="Global regulator protein family; Region: CsrA; cl00670" /db_xref="CDD:193904" gene 262637..264073 /locus_tag="Acear_0252" /db_xref="GeneID:9512254" CDS 262637..264073 /locus_tag="Acear_0252" /note="COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492:IPR001029; KEGG: cbk:CLL_A3427 flagellin; PFAM: flagellin domain protein; SPTR: B2TR35 Flagellin; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region" /codon_start=1 /transl_table=11 /product="flagellin domain protein" /protein_id="YP_003826867.1" /db_xref="GI:302391047" /db_xref="GeneID:9512254" /translation="MRINTNVTALNAYNQLKSTNENMSKSLERLSSGKRINSAADDAA GLAISEKMKGQMNGLAQAQRNAQDSISMIQTAEGALQETHSILQRMRELSVQAGNDTN TADDRAEIQEEIDQLKDEIDNIGETTEFNTKKLLNGGAGLETTTNTETVDGTDKEWAS VQGGSADTETGTIDITSATAASAGSYDLTVSTGEGTNESITVNGNTVNYDASASSATV SANNLQTVLNDNADKLGIEEVEDADVTSSGTMTIENAAIGSANELDISAGSTAVATST AIDVSNEGTDIDITAGTNGGNATAIADTDYVSSGNSIEVTGGKFEGLKLEFDGEEMST TAGTNKFNVEIESNGVVQSQIGANDGQNMSISINDMRSEALGVSNLDVTSAENANEAI STLDDAIQKVSSERSKLGAKQNRLEHITNNLSAAEENLTAANSRIRDVDMASEMMQMS KTRILSQAGTAMLAQANQKSQGVMQLLG" misc_feature 262643..263041 /locus_tag="Acear_0252" /note="Bacterial flagellin N-terminal helical region; Region: Flagellin_N; pfam00669" /db_xref="CDD:144315" misc_feature <263618..263965 /locus_tag="Acear_0252" /note="flagellar hook-associated protein FlgL; Validated; Region: flgL; PRK07701" /db_xref="CDD:181087" misc_feature 263810..264067 /locus_tag="Acear_0252" /note="Bacterial flagellin C-terminal helical region; Region: Flagellin_C; pfam00700" /db_xref="CDD:144340" gene 264185..265930 /locus_tag="Acear_0253" /db_xref="GeneID:9512255" CDS 264185..265930 /locus_tag="Acear_0253" /note="COGs: COG1345 Flagellar capping protein; InterPro IPR003481:IPR010810:IPR010809; KEGG: mta:Moth_0765 flagellar hook-associated 2-like; PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; flagellin hook IN repeat protein; SPTR: Q2RKF6 Flagellar hook-associated 2-like; PFAM: Flagellar hook-associated protein 2 C-terminus" /codon_start=1 /transl_table=11 /product="flagellar hook-associated 2 domain protein" /protein_id="YP_003826868.1" /db_xref="GI:302391048" /db_xref="GeneID:9512255" /translation="MADLSLDGLASGMPTENTINQILNAEYGTKLQNLNQEKSNLETQ KNAWRDVNSRIDKLEQKVTQLKLSSTFASNKTTSSDEEVVTATSTTDATEGTYDIEVV KKALAHRIAGTDQSAKIDSATSANSEDISEIAMQNGGEYTATQFSSGETIDGTTYDYG LKNSDGNIVAVSTNQQVYTSLDKATAEGDLGSLTSSNLGESYDFGSAIANNTVVRMDG TGANEKNNLATAIMMNDDTVTINGTDISVSATDTLEDFVIAVNDSDAGVNASTVSNRL ILESNETGTDNEITLSDNGNSNGQHLLEDLGLIDGSDNIITSNDGYQAAQNAEVTVNG ITGITSQDNTIDEAVSNVTFEISDAAQPSQETETATVTVSQDTEKATSKIQAFVDQYN SVQDFMNKKLDYNSETEESGALQGDGTLMRLQSRLRQLVMEQVDSGNEYNSLMSVGIS SKKNGTLEFDSGKFETALKEKPEQVKNLFTSEEDDGSFDGVATKLDSYLDMVIQTNIG VIPGKIDSYERMMEDVEQSIASTNDRLEQERERLTQEFTSMEQSISEMNNQMSWMQSQ LGSMGGTSNMLSSMM" misc_feature 264212..264511 /locus_tag="Acear_0253" /note="Flagellar hook-associated protein 2 C-terminus; Region: FliD_N; pfam02465" /db_xref="CDD:190316" misc_feature <264887..>265177 /locus_tag="Acear_0253" /note="flagellar hook-associated protein FlgL; Validated; Region: PRK06663" /db_xref="CDD:180648" misc_feature 265157..265858 /locus_tag="Acear_0253" /note="Flagellar hook-associated protein 2 C-terminus; Region: FliD_C; pfam07195" /db_xref="CDD:115824" gene 265961..268264 /locus_tag="Acear_0254" /db_xref="GeneID:9512256" CDS 265961..268264 /locus_tag="Acear_0254" /note="InterProIPR001173:IPR001440:IPR011990:IPR019734:IPR 013026; KEGG: cdf:CD0240 glycosyltransferase; PFAM: glycosyl transferase family 2; TPR repeat-containing protein; SPTR: Q18CX6 Putative glycosyltransferase; PFAM: glycosyl transferase family 2" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_003826869.1" /db_xref="GI:302391049" /db_xref="GeneID:9512256" /translation="MKLSIGMMVKNEAKYLEECLKSLQPIREAIESELVIVDTGSDDG TVEIAKQFTDKVYFHEWNDHFSEMRNTVISYTKGDWYFSIDGDEVVENPEGFIHFFQS GKYKEFNSALVTQKNYINKEKTNVSNLLVPRVFKNDEDFHFEGAIHNQPVVKKPVCTL DTVLEHYGYLQNDQELMERKFNRTSNILKRELENDPENIYYRFQLANSYGMHGDYDKA IENIEKTYEVVNQKKTDLSSYLYIHNLMAKMYLGQNRLSEAEKICKEAIGLAKGYYSD LYYYLGKAQLKLNKNEEAIENFKIYLDIVEKDGPLEQINDTSFIFYTEDNLEQAYLFL LVLYERIEDYEQIINVSYKIKSKDNIKQVIPKAIKACVETDRFNEIKNYYQNKILTEF KDLSGKYLAELESKMMTMNKEKKYNIFNVFSVEKSSYGILNKVRLRELKDNKLVNLIT KMNFNSLPNYYGDIIYYLLQNKYFLVDVCGVIQEQRLNKFLQYVLDDNKEENISSVLY EYLENRFNVETLSHLNINKVLERYILVLDDLNNEKYFNIFRRYIEDGTKYIKMVYSDE IIQNEMTQFVKNDEEVFLLYIYLANQHKENNPKKYVRYLRKSLDAFPAMKKGIQMLLE RFEKKDTLNGGLENYQEKIKNNIDKLINNGNLKKAEELINEYEDTIEDDAEIYSMKSV IAIMKNNFKKAKKIIKNGLEIEPDNFDLLYNLGYVYEELNQYNQAKDYYLQAKNSINS SKQKDDLAQALKRIEEKTKEVEEKYGL" misc_feature 265964..266536 /locus_tag="Acear_0254" /note="UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide; Region: Beta4Glucosyltransferase; cd02511" /db_xref="CDD:133005" misc_feature order(266213..266215,266219..266221) /locus_tag="Acear_0254" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:133005" misc_feature 266567..266872 /locus_tag="Acear_0254" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature order(266567..266572,266579..266584,266690..266695, 266699..266704,266711..266716,266795..266800, 266807..266812,266819..266824) /locus_tag="Acear_0254" /note="binding surface" /db_xref="CDD:29151" misc_feature order(266576..266578,266612..266614,266624..266626, 266633..266635,266699..266701,266735..266737, 266747..266749,266756..266758,266804..266806, 266840..266842,266852..266854,266861..266863) /locus_tag="Acear_0254" /note="TPR motif; other site" /db_xref="CDD:29151" gene 268254..270620 /locus_tag="Acear_0255" /db_xref="GeneID:9512257" CDS 268254..270620 /locus_tag="Acear_0255" /note="COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterProIPR001579:IPR001296:IPR013216:IPR011990:IPR 013026; KEGG: fno:Fnod_1483 methyltransferase type 11; PFAM: methyltransferase type 11; glycosyl transferase group 1; SPTR: A7HN43 methyltransferase type 11; PFAM: methyltransferase domain; glycosyl transferases group 1" /codon_start=1 /transl_table=11 /product="methyltransferase type 11" /protein_id="YP_003826870.1" /db_xref="GI:302391050" /db_xref="GeneID:9512257" /translation="MDYNKINKLINQGQFDQAEKEIRKIKEETKKNNFFGLLNYHNNK FEIARNYFEKGLERNPMDMELLYNYGCCLKDLGEDMEAWRYFMRISNKDYKVYDHLGD IEYQNRSKVAAIKFYKKAFELSQFKEIETKYNEVRNLMKKNTKIVFLTVPGIGWGFID NKVEALSLIYDVKFVVSTDGEEIKEAVEWADIVWLEWANEMAVHVTNNVSSIKDKKVI CRLHGYEVFSDYGKKINFNYIDKMIFVAEHKKELLIEKYGELIDEEKIEVIRNGVDLD QFYIPENKKKNKKIALVGNINYRKGLLLLLNHFHELLKVDNEYKLFIRGEHQDFRYKM AIETMIEELGLEDNIEFIFERVDDINKWLEDKSYIISASVEESFHYALAEGMAAGLQP VIHAWRESRDIWPGKYIFKETEEFKKLFLERELTPLEYREYIENNYSLENQLYEVEKI ISKLLETKTTKGIKQDYNSLNKVNRTDAVQLINNFIPYSEQFFSNISFDKLNLVTLKA EKIQEKLFHLEMLLANKNNNIFIQNVIFNKNVNSLQIPNNYKKIKPLIKKIVNGLDFN FEQDIKTYIYDEDLKNHIESNFKNYLWERAYPGTQFMRFHGELRIVCYYTFAEDLVKN KKVLEAASGFGYGAAYFSKYAKEVTALDILEENLDWGKKTFGFNNVNWKQGDVTNLPF EDNSFDIYTSYETIEHLKSKDIISYLKEAKRVVKDKGIFLLSTPNKRVREGKIDNPFH ISEMYFKEFNEFLQEVFEEIEYYSYQEFKIHPGVKENSAENFIAICKV" misc_feature 268359..268622 /locus_tag="Acear_0255" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature order(268359..268361,268395..268397,268407..268409, 268416..268418,268461..268463,268497..268499, 268509..268511,268554..268556,268590..268592, 268602..268604,268611..268613) /locus_tag="Acear_0255" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature order(268362..268367,268452..268457,268461..268466, 268473..268478,268545..268550,268557..268562, 268569..268574) /locus_tag="Acear_0255" /note="binding surface" /db_xref="CDD:29151" misc_feature <268887..269435 /locus_tag="Acear_0255" /note="Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate...; Region: Glycosyltransferase_GTB_type; cl10013" /db_xref="CDD:186885" misc_feature 270180..270422 /locus_tag="Acear_0255" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene 270648..272351 /locus_tag="Acear_0256" /db_xref="GeneID:9512258" CDS 270648..272351 /locus_tag="Acear_0256" /note="KEGG: pmo:Pmob_0975 hypothetical protein; SPTR: A9BJV4 Putative uncharacterized protein; PFAM: Sulfotransferase domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826871.1" /db_xref="GI:302391051" /db_xref="GeneID:9512258" /translation="MELKIDLPDKKISEEQLEKILIDFTKKMYIEGFMKNSNINIGNL KLRFIVSTGRTGTKFFAKFFNSLDKIISYHEPYPNLFGLSKDFVINRINSQEVINTFL VNRAYYLNQARRMKFNYYIESNSGGLWGIIPVLGKQLPNYKILHIIRDGREWVRSVMN RTLFRDKDPLDDIRFKANDLPNSPYFSRWEEMSRFEKACWSWVKKNKIMKRDVLQDKN CLTLKFEKLFDKNDYEKILVELLNFFEIKVTDEIIDKYRKHLESPVNENINDSFPGFE DWTQEQKRQFKNICGDLMEYYGYEMSGIEYNKPKINTQKKKNLIVTGIPKSGTTLFSY LISSLPNAICLDEIFYNINELPDKFSEIRKRLILKKPIPNSFKENGELSTNKRGEKRE KKLKVIEKDFDKNAIVGSKVNVPYLFQIEKLISYGYKIIAIVRNPLYTIGSWRTWISQ IGKLVPETRVTEEDMHERYKDFPFKSDIAVERQAEVWQFLASIIWDHRQHINIITYEQ LTENTKETLKDICSYLNLDMPNEKFELDNMNEEERYSNLDAIEKAVKKYAPIRTVFGY D" gene 272439..272894 /locus_tag="Acear_0257" /db_xref="GeneID:9512259" CDS 272439..272894 /locus_tag="Acear_0257" /note="COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713:IPR008207; KEGG: hor:Hore_17030 flagellar protein FliS; PFAM: flagellar protein FliS; SPTR: B8CYT3 Flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS" /codon_start=1 /transl_table=11 /product="Hpt protein" /protein_id="YP_003826872.1" /db_xref="GI:302391052" /db_xref="GeneID:9512259" /translation="MTNNPYQKYKNTQVETASQEKLLLMLYDGAIKFLKQAIKGVEEN DYEAANNYLVRTQDIIHELMATLDMEKGGEIARNLESLYDYMNRRLIEANVNKDIEPM EEVRDMLAELRETWQEAIKKVKQNKADQPSKDETNKRPQNLSGGINIEG" misc_feature 272439..272798 /locus_tag="Acear_0257" /note="Flagellar protein FliS; Region: FliS; cl00654" /db_xref="CDD:193900" gene 272884..273396 /locus_tag="Acear_0258" /db_xref="GeneID:9512260" CDS 272884..273396 /locus_tag="Acear_0258" /note="KEGG: amt:Amet_0787 hypothetical protein; SPTR: A6TLE4 Putative uncharacterized protein; PFAM: FlgN protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826873.1" /db_xref="GI:302391053" /db_xref="GeneID:9512260" /translation="MKDNNDNLSIENLIKKLTNNYEEELNYYKEMLKLTNQQQQVIED DEWQSLNQLVSRKRELMKKVDELEKQILSYQEKISAELNLQIGDTFYPELCNKDLPGT KKLKQVLINVYRLMQQIGELDKVNQARMEEKKKQKQQELNDVNQGLSVNRAYSGKSDS SEGKFIDQNK" gene 273420..273995 /locus_tag="Acear_0259" /db_xref="GeneID:9512261" CDS 273420..273995 /locus_tag="Acear_0259" /note="KEGG: hor:Hore_17050 hypothetical protein; SPTR: B8CYT5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826874.1" /db_xref="GI:302391054" /db_xref="GeneID:9512261" /translation="MEVYINEDQLEGVSGDIEEIISNVHSRLDREIVEQIYLNDMRVN EDLLLSSDFEFDEESILKFETKEVNQLIEETLSEIDMYLPKLKEGVINTAQLFRQEKL EKGRAKYESCLEGLEWYINVLQNILSLLDSEELTKQGEEILIEFNKRLRDVMKKMQIK DFDSAADLLEDEIVDYIGQFNELNDKLTNVK" gene 274050..274424 /locus_tag="Acear_0260" /db_xref="GeneID:9512262" CDS 274050..274424 /locus_tag="Acear_0260" /note="InterPro IPR005186; KEGG: hor:Hore_17070 flagellar protein FlaG protein; PFAM: flagellar protein FlaG protein; SPTR: B8CYT7 Flagellar protein FlaG protein; PFAM: FlaG protein" /codon_start=1 /transl_table=11 /product="flagellar protein FlaG protein" /protein_id="YP_003826875.1" /db_xref="GI:302391055" /db_xref="GeneID:9512262" /translation="MKVSEVSNNQPTSSEQSKTRQIESTSQKDKVDLQAGEEETKEQK TDEKKVTEENVKDGIEKLNETVQTFHEELKFEMHKESERMMTKVVNTEKHEVIKEIPP KEVLDMIGRIKDMVGLILDEKI" misc_feature <274212..274418 /locus_tag="Acear_0260" /note="FlaG protein; Region: FlaG; cl00591" /db_xref="CDD:193880" gene 274499..275515 /locus_tag="Acear_0261" /db_xref="GeneID:9512263" CDS 274499..275515 /locus_tag="Acear_0261" /note="SPTR: C1SMZ9 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826876.1" /db_xref="GI:302391056" /db_xref="GeneID:9512263" /translation="MHTKSLNVAAINQNLDWNFAVHYGVVEYLAGYDPAEAWNVRGIS GRGGSSQKYFDYRQEKVVELEDQLKNSQELQNKLDDFLEECFTLFNAFRDENQQMIDQ YLDKEFYFILGADRTGGTFMLKELSRALDWSYQNLHMSILHEHMPDFDIEEPDAIGWR KPDNYYYLLFQIVQFLVYINRVVPEEEYVVKKTRFSKCMQLIDYIFGDKAYYIVTVRH PAAINASRMETGATGEVVDDVKREGKRTLYLWQTVYREIVRDGQPEGLILPIQFGSGM DEFLADFFAHHNASVEPDKCHITERDYDYDFWTSDYVVNSMEWVRMLWQLHELEFPVP EEIL" gene 275903..280363 /locus_tag="Acear_0262" /db_xref="GeneID:9512264" CDS 275903..280363 /locus_tag="Acear_0262" /note="COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492:IPR011110:IPR001029:IPR011047; KEGG: dth:DICTH_0238 lipoprotein, PFAM: flagellin domain protein; Two component regulator propeller; SPTR: B5YC13 Lipoprotein, PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region" /codon_start=1 /transl_table=11 /product="flagellin domain protein" /protein_id="YP_003826877.1" /db_xref="GI:302391057" /db_xref="GeneID:9512264" /translation="MRVLNNANALKALNQLKKNDKKRTKSLKKLSSGKRIDTAADDAA GMAISQKMRAEINGLQQAQENIQNGTSLLQTAEGAMDSIQDILHRMKELTIQGANDTL SETDKESIQAELEELRSKAGRIANETKFNGMPLIDGTFSQKQEQVAGNSSRDFNVPDD GTTVTRQIEIGDFMVDFNFTKLSEEEVRIDVKHEDKLLATKTITQDPLKWEKNLGGSF YDSAQDITKTSDGGYVVIGRTESIDEDLEDKKSSFDSDMWAVKLDEDKNIKWQTTLGG SDFDEGSTVQETSSGDIIISGTETSNDGDKDISVAKLSADGDVKFTKPFGGGKDQGKS VYPTQDGGYILAGDSDSTDKDDDMLLMKLDQNGEFQWEKYLDHGDLFDEVNDIKQTAD DGYIVAGSNNNYGTAGMYKLDSSGNQEWHKNYSGNSIESVEELSGGDYVFAGREGSGG GSDMMIVKTESNGDQVWKRSLDNLGDFDEGVSIEITDDGKYVVSGTTTSSNEDKDIAA VKLDQDGNKIWDTFNQGFGGNGDEGTEVTVTNDNGYIVTNPDNNSKDNLAIKFNARGA FEWETTIGGSNDQINNLKDTGSGYLATGKSTSTGEKWVAELDSDGQVNVKKDITDSAD VEKITDLQKLNSGGYALSGRKDESGNKEGWVAKLGSDLSTTNTATLGGSSFDQINSIQ QTSNGFLVAGESKSNDGDLSNNYGSSDVWAAGLQDNFSLDWQKNFGGSEYDAASSIRK TSDGGYLIAGETKSTDHDLSSEKSGTNRDGWVIKLDDTKSIDWQKNLGGAIEDRFTDI SVDEANDEYIVAGTRESISDYDKEAWAAKFAEDGTEKWNKTFSDRNFNQGIDLKKTTD GYILSGVDDEDNKVMIKLDADGNKDWENELNDKDDSASSIRQTSDGGYIVAGTKTSNF GDKDGTIIKLDADGNKEWEQLVGNEYSQEEISNLEIEQDGSGDYIISGTKNNQLWATK LNSDGTKKWSQTYDGFEATDIKEDNNGNYIISGTKTSTDGDEDMTILNVDPTDGSKNW QHNFGGGDDWVGNVQETSDGGYILSGTKTSNDGDKDALVLKLDSTGDISWEQKIKENN LDEEGITATESDEGGYILSATKETVDGDTDVWIRKLNDDGSKDWDKAFGGDNDETAGN IQQTDDGGYIVSGTQVTDDGDKDVYAVKLDETGTKEWDTSTVSIGGSGDEEANHIQQT IDGGYIIAGQSDSTDIPNNSNHGGDDLLLAKLDKDGNLEWQDLLGGSGDDGASSVEEI SDGNYIISGRTTSSDGDVDNNYGSSDMWVVNYSKGRSEVSLNPTEEASKRAKYGHGTS WLDLDEVNIDFNWKDFNVEEIDAQGEQRTEANFVVQDDAKADESNHLWAEIDNLTLEE LGLDDLPKVASASEEKIQTSLEMMDEANQKVSTARAKIGSYQNRLEHTSQNVTNYRTN LMESESRIEDADMAQEMMKLTKRQIISQVSQTMLAQMNNIDNGVLQLLSV" misc_feature 276005..>276778 /locus_tag="Acear_0262" /note="flagellin; Validated; Region: PRK06819" /db_xref="CDD:180711" misc_feature <276005..276325 /locus_tag="Acear_0262" /note="Bacterial flagellin N-terminal helical region; Region: Flagellin_N; pfam00669" /db_xref="CDD:144315" misc_feature <279692..280354 /locus_tag="Acear_0262" /note="Flagellin and related hook-associated proteins [Cell motility and secretion]; Region: FlgL; COG1344" /db_xref="CDD:31535" misc_feature 280097..280354 /locus_tag="Acear_0262" /note="Bacterial flagellin C-terminal helical region; Region: Flagellin_C; pfam00700" /db_xref="CDD:144340" gene 280528..280848 /locus_tag="Acear_0263" /db_xref="GeneID:9512265" CDS 280528..280848 /locus_tag="Acear_0263" /note="KEGG: hypothetical protein; PFAM: FlgN protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826878.1" /db_xref="GI:302391058" /db_xref="GeneID:9512265" /translation="MKVNEDAVPKIEEQVELYQELLEVLKKENQLLTEDKDVSDLQEQ KREIKDEIADINTELNVKFTISQGDKLRVIMNSDSEKLNQLKPTLEEVYELEQKNQQA LNAK" gene 280949..281767 /locus_tag="Acear_0264" /db_xref="GeneID:9512266" CDS 280949..281767 /locus_tag="Acear_0264" /note="COGs: COG1606 ATP-utilizing protein of the PP-loop superfamily; InterPro IPR011063:IPR014729:IPR005232; KEGG: chy:CHY_1281 hypothetical protein; PFAM: PP-loop domain protein; SPTR: Q3ACL9 Putative uncharacterized protein; PFAM: Asparagine synthase; TIGRFAM: conserved hypothetical protein TIGR00268" /codon_start=1 /transl_table=11 /product="PP-loop domain protein" /protein_id="YP_003826879.1" /db_xref="GI:302391059" /db_xref="GeneID:9512266" /translation="MTSLEQKFTELKDILRSMDSLLVAFSGGVDSTLLLKVAHDILGD QAAALTVEASIHPPGEAEEAEELAQQMGVEHILVEADPLQNEDFARNDKLRCYYCKYN IFSDLKEIAAKEGYAELADGANYDDFTGDYRPGLKAAEELGVRSPLKEAEITKEEVRK LSKRLDLPTWDKPSLSCYATRFPYGSKITKQNLDLVAAAEEYLHQFGLKQLRVRHHDQ ATARIEVLPDDIEKLIEKRQEIVAKLKELGYTYVTLDLEGYRTGSLNEILDEEE" misc_feature 280958..281758 /locus_tag="Acear_0264" /note="ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]; Region: COG1606" /db_xref="CDD:31794" misc_feature 281009..281620 /locus_tag="Acear_0264" /note="This is a subfamily of Adenine nucleotide alpha hydrolases superfamily. Adenine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily; Region: Alpha_ANH_like_I; cd01990" /db_xref="CDD:30177" misc_feature order(281018..281026,281030..281041,281096..281098, 281102..281104) /locus_tag="Acear_0264" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30177" gene 282081..282827 /locus_tag="Acear_0265" /db_xref="GeneID:9512267" CDS 282081..282827 /locus_tag="Acear_0265" /note="COGs: COG1691 NCAIR mutase (PurE)-related protein; InterPro IPR000031; KEGG: dhd:Dhaf_2912 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: Q24WP3 Putative uncharacterized protein; PFAM: AIR carboxylase" /codon_start=1 /transl_table=11 /product="1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase" /protein_id="YP_003826880.1" /db_xref="GI:302391060" /db_xref="GeneID:9512267" /translation="MQPDRLKEILTKVEAGNLDVDTALEELKSPGYEDLGFAKVDQHR NLRRGFPEVVLCEGKTEEQIVKIMQKLAETEENALATRADEDIYQAVKEELPEIEYNE AAKTLVLQQTDLAEEGSILVISAGTSDIPVAEEAYETARIMGNSVERLYDVGVAGIHR LLENQKQLRQARVVIVAAGMEGALASVVGGLVDKPVIGVPTSVGYGASFEGVASLLGM LNSCSAGVGVVNIDNGFGAAYLASSINKME" misc_feature 282090..282821 /locus_tag="Acear_0265" /note="AIR carboxylase; Region: AIRC; cl00310" /db_xref="CDD:153673" gene 282843..283586 /locus_tag="Acear_0266" /db_xref="GeneID:9512268" CDS 282843..283586 /locus_tag="Acear_0266" /note="COGs: COG1641 conserved hypothetical protein; InterPro IPR002822; KEGG: chy:CHY_1283 hypothetical protein; PFAM: protein of unknown function DUF111; SPTR: Q3ACL7 Putative uncharacterized protein; PFAM: protein of unknown function DUF111; TIGRFAM: conserved hypothetical protein TIGR00299" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826881.1" /db_xref="GI:302391061" /db_xref="GeneID:9512268" /translation="MKIAYFDIFSGISGNMILGSLLNAGLELDRLKGELSKLDLTGYQ LQVETAVKNGVSGTYLNVELEKDNHHHDDHEDHHGRHLAEIEEIIADSDFAAPVKEMS SRIFRRLAQAEAKIHNKDPEQVHFHEVGAVDAIVDIVGAAVGIHELGIDQVVASRIHT GTGFVDCAHGKIPIPAPATLELLQNTPVYSTGIESELVTPTGAAIITTLADEFGPLPL MQIKSIGYGAGSRDLEIPNLLRVSIGELV" misc_feature 282843..>283577 /locus_tag="Acear_0266" /note="Uncharacterized conserved protein [Function unknown]; Region: COG1641; cl03398" /db_xref="CDD:186571" gene 284504..285803 /locus_tag="Acear_0267" /pseudo /db_xref="GeneID:9512269" gene 286267..286758 /locus_tag="Acear_0268" /db_xref="GeneID:9512270" CDS 286267..286758 /locus_tag="Acear_0268" /EC_number="1.6.5.3" /note="COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012335:IPR012336; KEGG: nth:Nther_0096 NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: B2A3R9 NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit E" /protein_id="YP_003826882.1" /db_xref="GI:302391062" /db_xref="GeneID:9512270" /translation="MGCQCGKQEENLNKYLEPLFKILDGYAKEEKNLIPILQDVQDEY DYLPEPVLKEVATEIGLSASQVYGVATFYSQFHLEPRGDNIIRVCMGTACHVRGAENI LNKIEEELEIEEGETTENLEFTLESVACIGACGLAPVIMINDDTHGRLTPDRVPEVLA QYQ" misc_feature 286519..286752 /locus_tag="Acear_0268" /note="TRX-like [2Fe-2S] Ferredoxin (Fd) family, NADH:ubiquinone oxidoreductase (Nuo) subunit E subfamily; Nuo, also called respiratory chain Complex 1, is the entry point for electrons into the respiratory chains of bacteria and the mitochondria of...; Region: TRX_Fd_NuoE; cd03064" /db_xref="CDD:48613" misc_feature order(286519..286521,286525..286527,286645..286653) /locus_tag="Acear_0268" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:48613" misc_feature order(286531..286533,286546..286548,286654..286656, 286666..286668) /locus_tag="Acear_0268" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:48613" gene 286849..287214 /locus_tag="Acear_0269" /db_xref="GeneID:9512271" CDS 286849..287214 /locus_tag="Acear_0269" /note="InterPro IPR012335:IPR012336; KEGG: nth:Nther_0098 ferredoxin-like protein; SPTR: A1HP39 NADH dehydrogenase (Quinone); PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit" /codon_start=1 /transl_table=11 /product="NAD(P)-dependent iron-only hydrogenase iron-sulfur protein" /protein_id="YP_003826883.1" /db_xref="GI:302391063" /db_xref="GeneID:9512271" /translation="MKSLDELNELKEKVQKDMKTRKSEGKPKVIVGMGTCGIAAGARE IMQALLDEINKRDLDVIVTQTGCIGMCEKEPLVDVKLPGKDRITYGGVTEEDAQKIIV EHVVNGNIVEDLLVAKLEE" misc_feature 286927..287160 /locus_tag="Acear_0269" /note="Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:; Region: TRX_Fd_family; cd02980" /db_xref="CDD:48529" misc_feature order(286930..286932,286936..286938,287038..287046) /locus_tag="Acear_0269" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48529" misc_feature order(286942..286944,286957..286959,287047..287049, 287059..287061) /locus_tag="Acear_0269" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:48529" gene 287244..289046 /locus_tag="Acear_0270" /db_xref="GeneID:9512272" CDS 287244..289046 /locus_tag="Acear_0270" /EC_number="1.6.99.5" /note="COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR017900:IPR001949:IPR011538:IPR019554:IPR 019575:IPR001450:IPR012335:IPR012336:IPR017896; KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: A1HP38 NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain" /codon_start=1 /transl_table=11 /product="NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein" /protein_id="YP_003826884.1" /db_xref="GI:302391064" /db_xref="GeneID:9512272" /translation="MVDSIYRSHIIICGGTGCVSSGCEEVQKALEDELDKQDLTDEIN IVETGCHGLCEKGPVMVIYPEGIFYCELQPEDMEELVTEHILKDRIVDRLLYKEPITE EDIPSYQNIDFYEKQQRVVLSNCGRVDPESIKEYIAEDGYQAVGETLTTMTSQEVIDE VKEAGLRGRGGGGFPTGIKWQFAHDSEDDKKYIICNADEGDPGAFMDRSILEGDPHRV IEGMIIAAYAIGASEGYIYVRAEYPLAIERLEKAIEQAEEYGLLGDNLFESGFDFKLQ IKKGAGAFVCGEETALMNSIEGKRGMPRPRPPFPAQKGLWGYPSNINNVETYANVPVI INQGADEYSKVGTEDSTGTKIFAITGKIQNTGLAEVPMGITMREIIYDVGGGIMGGKD FKAVQIGGPSGGCLPEEKLDLSVDYDSLIEAGAMMGSGGLVVMDEDTCMVDVAKFFLD FTQSESCGKCTPCREGTKRMLEILKRITAGEGKEGDIELLEELSHHIKSTSLCGLGQS APNPVLSTIQYFRDEYEAHIYEETCPAGNCQELVAGYVIDEEDCIGCTSCVDVCPVDA IEGEKKEAHVIDTDECINCGSCVDECPVDAISQA" misc_feature 287268..287495 /locus_tag="Acear_0270" /note="Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:; Region: TRX_Fd_family; cd02980" /db_xref="CDD:48529" misc_feature order(287268..287270,287274..287276,287382..287390) /locus_tag="Acear_0270" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48529" misc_feature order(287280..287282,287295..287297,287391..287393, 287403..287405) /locus_tag="Acear_0270" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:48529" misc_feature 287571..288839 /locus_tag="Acear_0270" /note="NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion]; Region: NuoF; COG1894" /db_xref="CDD:32078" misc_feature 287724..288239 /locus_tag="Acear_0270" /note="Respiratory-chain NADH dehydrogenase 51 Kd subunit; Region: Complex1_51K; pfam01512" /db_xref="CDD:144926" misc_feature 288306..288461 /locus_tag="Acear_0270" /note="SLBB domain; Region: SLBB; pfam10531" /db_xref="CDD:192616" misc_feature 288567..288704 /locus_tag="Acear_0270" /note="NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Region: NADH_4Fe-4S; pfam10589" /db_xref="CDD:192637" misc_feature 288876..288947 /locus_tag="Acear_0270" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" misc_feature 288897..289031 /locus_tag="Acear_0270" /note="4Fe-4S dicluster domain; Region: Fer4_7; pfam12838" /db_xref="CDD:193313" misc_feature 288969..289037 /locus_tag="Acear_0270" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" gene 289072..290823 /locus_tag="Acear_0271" /db_xref="GeneID:9512273" CDS 289072..290823 /locus_tag="Acear_0271" /note="COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR017900:IPR000283:IPR001041:IPR019574:IPR 001450:IPR004108:IPR003149:IPR009016:IPR017896:IPR013352; KEGG: hor:Hore_06330 NADH dehydrogenase (ubiquinone) 75 kDa subunit; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; SPTR: B8D2G3 NADH dehydrogenase (Ubiquinone) 75 kDa subunit; TIGRFAM: hydrogenase, Fe-only; PFAM: Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenases, Fe-only" /codon_start=1 /transl_table=11 /product="NAD(P)-dependent iron-only hydrogenase catalytic subunit" /protein_id="YP_003826885.1" /db_xref="GI:302391065" /db_xref="GeneID:9512273" /translation="MDTVILTHKDTVRLTIDGQEVEVEKGSTVLEAARELGIELPTLC YHEELTLFGSCRVCEVEDEETGNLMASCVTPVTEGMKIRTNSSKARRARRMNVELLLA NHPNECLTCDRNGTCELQQIAYDLGVHDIRFEGDTRDHPIDNDGPCLERDPNKCILCG RCVRVCNEIQEVAALDFTERGFNSTVTTAFDLPQSEINCTNCGQCAVVCPVGAITEVS EISDVWDALEDEDQHVVVQVAPAIQASIGEEFGMEPGTIVTGKLVTALQELGFDKIFS TEFTADLTIMEEGNELLKRIKGQKKLPQFTSCCPGWVKFCEHNYPEYLDNLSTAKSPQ QMFSTLAKTYYAEQEDIDPEDIFTVSVMPCTAKKFEKNREEMADSGHQDTDAVLTTRE AARMIKEMGIQFHKLTDSKYDKMMGAHTGAGTIFGTTGGVMEAALRTAYEVLTDDELP RLDLTEVRGMDGIRDANVQLNGDNVKVAVVHGLKNAADLLDKIEAGEIEYDFVEVMAC PGGCIGGGGQPFASTTMDVKAKRAEALYQTDKANTIRKSHENPQIIKLYEDYLGEPLS SDSHHLLHTSYQERSKN" misc_feature 289102..289320 /locus_tag="Acear_0271" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature order(289189..289194,289201..289203,289228..289230, 289234..289245,289282..289287) /locus_tag="Acear_0271" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature order(289201..289203,289234..289236,289243..289245, 289285..289287) /locus_tag="Acear_0271" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" misc_feature 289348..289470 /locus_tag="Acear_0271" /note="NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Region: NADH-G_4Fe-4S_3; pfam10588" /db_xref="CDD:192636" misc_feature 289522..290628 /locus_tag="Acear_0271" /note="hydrogenase, Fe-only; Region: Fe_only_hydrog; TIGR02512" /db_xref="CDD:162896" misc_feature <289531..>289842 /locus_tag="Acear_0271" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" misc_feature 289729..290628 /locus_tag="Acear_0271" /note="Iron only hydrogenase large subunit, C-terminal domain; Region: Fe_hyd_lg_C; pfam02906" /db_xref="CDD:190471" misc_feature 290638..290814 /locus_tag="Acear_0271" /note="Iron hydrogenase small subunit; Region: Fe_hyd_SSU; pfam02256" /db_xref="CDD:190260" gene 290908..291684 /locus_tag="Acear_0272" /db_xref="GeneID:9512274" CDS 290908..291684 /locus_tag="Acear_0272" /note="COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR018313:IPR001638:IPR001320; KEGG: dth:DICTH_0909 glutamine ABC transporter, periplasmic glutamine-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; SPTR: B5YE13 glutamine ABC transporter, periplasmic glutamine-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="extracellular solute-binding protein family 3" /protein_id="YP_003826886.1" /db_xref="GI:302391066" /db_xref="GeneID:9512274" /translation="MSKRIKLFLVTLLGLALVVGVVGCTGTEEKTTFNEIKEEGKLVV GCSADYKPFEYPNEEGEIVGFDVELMEAVGEELGLEVEFKDTAFDGLIPSLKSKKFDV IVSAMTITDKRAEAVDFSEPYFNAGQVIAVKEGSTDIQGPEDLAGKVVGVQLGTTGDL EASEMEDIKQVKRYEKITQAFIELRNGRIDAVVNDLPVTAAYIMDNPDVEIIGKPFTE ENYGIAMRPKDDELEQKINETIEKLRENGTYDEIYNKWFK" misc_feature 291031..291678 /locus_tag="Acear_0272" /note="Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-associated, periplasmic binding proteins (PBPs) to transport a wide variety of substrates, such as, amino acids, peptides, sugars, vitamins and...; Region: PBPb; cd00134" /db_xref="CDD:29040" misc_feature 291031..291678 /locus_tag="Acear_0272" /note="Bacterial extracellular solute-binding proteins, family 3; Region: SBP_bac_3; pfam00497" /db_xref="CDD:189575" misc_feature order(291055..291057,291169..291171,291244..291246, 291376..291378,291490..291492) /locus_tag="Acear_0272" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29040" misc_feature order(291439..291441,291451..291453,291469..291471) /locus_tag="Acear_0272" /note="membrane-bound complex binding site; other site" /db_xref="CDD:29040" misc_feature 291562..291579 /locus_tag="Acear_0272" /note="hinge residues; other site" /db_xref="CDD:29040" gene 291851..292504 /locus_tag="Acear_0273" /db_xref="GeneID:9512275" CDS 291851..292504 /locus_tag="Acear_0273" /note="COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: fno:Fnod_1057 polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A1HT15 Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuC" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter membrane protein" /protein_id="YP_003826887.1" /db_xref="GI:302391067" /db_xref="GeneID:9512275" /translation="MYEAFVEALPFLLKGSVMTIKITTIAVGMGIILGNVLGLARVSK NPIIGGVAKGYIEIFRGTPLLVQLFILYYGLPSLGINLTPYIAAVLGLGLNSGAYVGE IVRGGIESIDKGQMEAARSVGMSYAQSMRYIILPQAFKSIVPALGNEFIALLKDSSLV SVIAVKDLTRQGRLIISRTYQSFFIFLTVAVFYFIMVFIMTRLVNYAERKLKTSDQN" misc_feature 291884..292480 /locus_tag="Acear_0273" /note="ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; Region: ArtQ; COG4215" /db_xref="CDD:33942" misc_feature 291905..292453 /locus_tag="Acear_0273" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(291944..291949,291956..291961,291974..291976, 292004..292015,292019..292048,292055..292060, 292064..292066,292130..292135,292139..292141, 292145..292147,292154..292159,292163..292165, 292175..292180,292187..292189,292238..292240, 292280..292285,292292..292294,292313..292324, 292331..292336,292373..292378,292406..292411, 292418..292423,292427..292432,292439..292444, 292451..292453) /locus_tag="Acear_0273" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(292022..292066,292313..292330) /locus_tag="Acear_0273" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(292064..292066,292115..292117,292331..292333, 292367..292369,292376..292378,292406..292408) /locus_tag="Acear_0273" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(292190..292228,292244..292249,292259..292261) /locus_tag="Acear_0273" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 292491..293213 /locus_tag="Acear_0274" /db_xref="GeneID:9512276" CDS 292491..293213 /locus_tag="Acear_0274" /note="COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: chy:CHY_0506 glutamine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q3AES0 glutamine ABC transporter, ATP-binding protein; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter ATP-binding protein" /protein_id="YP_003826888.1" /db_xref="GI:302391068" /db_xref="GeneID:9512276" /translation="MIKIENLYKNFGDLEVLKDINLEIDAGEVVVIIGPSGSGKSTVL RCINLLEELTSGQIYIEETPMDDPETDINLMRQKVGMVFQQFNLFPHKTSLENITLAP TKVKKLAEDEAENIAYELLDKVGLQDKADVYPAQLSGGQKQRIAIARALAMEPKVMLF DEPTSALDPEMVGEVLEVMGTLAQEGMTMAVVTHEMGFAREVGDRICFMDEGRIVETG PPTQIFDNPQEERTQEFLSKIL" misc_feature 292491..293210 /locus_tag="Acear_0274" /note="ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; Region: GlnQ; COG1126" /db_xref="CDD:31323" misc_feature 292494..293132 /locus_tag="Acear_0274" /note="HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP; Region: ABC_HisP_GlnQ_permeases; cd03262" /db_xref="CDD:73021" misc_feature 292590..292613 /locus_tag="Acear_0274" /note="Walker A/P-loop; other site" /db_xref="CDD:73021" misc_feature order(292599..292604,292608..292616,292740..292742, 292971..292976,293070..293072) /locus_tag="Acear_0274" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73021" misc_feature 292731..292742 /locus_tag="Acear_0274" /note="Q-loop/lid; other site" /db_xref="CDD:73021" misc_feature 292899..292928 /locus_tag="Acear_0274" /note="ABC transporter signature motif; other site" /db_xref="CDD:73021" misc_feature 292959..292976 /locus_tag="Acear_0274" /note="Walker B; other site" /db_xref="CDD:73021" misc_feature 292983..292994 /locus_tag="Acear_0274" /note="D-loop; other site" /db_xref="CDD:73021" misc_feature 293058..293078 /locus_tag="Acear_0274" /note="H-loop/switch region; other site" /db_xref="CDD:73021" gene 293317..293868 /locus_tag="Acear_0275" /db_xref="GeneID:9512277" CDS 293317..293868 /locus_tag="Acear_0275" /note="COGs: COG1544 Ribosome-associated protein Y (PSrp-1); InterPro IPR003489; KEGG: hor:Hore_16460 sigma 54 modulation protein/ribosomal protein S30EA; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; SPTR: B8CYM6 Sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S30P;sigma 54 modulation protein" /protein_id="YP_003826889.1" /db_xref="GI:302391069" /db_xref="GeneID:9512277" /translation="MKFIIRGKNIEITDALKQYAEEKIGKIERYFDDDPPIEARISLE VEKERHIVEVTVYIDGLTIRGEEVTGDMYASIDGVIEKLERQIHKYKTKINRKIKEER KELKANLAESNLLDEDEEEDEPKIVRTKRFAMKPMNVEEAVMQMELLDHDFFVFFNSD SEEVNVVYKRNAGDYGLIEPTLG" misc_feature 293320..293586 /locus_tag="Acear_0275" /note="RaiA ('ribosome-associated inhibitor A', also known as Protein Y (PY), YfiA, and SpotY, is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site...; Region: RaiA; cd00552" /db_xref="CDD:29642" misc_feature order(293326..293328,293332..293334,293338..293340, 293392..293394,293401..293403,293425..293430, 293440..293442,293452..293454,293479..293481, 293488..293499,293506..293508,293512..293514, 293521..293523,293527..293529,293536..293538, 293578..293583) /locus_tag="Acear_0275" /note="30S subunit binding site; other site" /db_xref="CDD:29642" gene 294027..296624 /locus_tag="Acear_0276" /db_xref="GeneID:9512278" CDS 294027..296624 /locus_tag="Acear_0276" /note="COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR000185:IPR011115:IPR011130:IPR001650:IPR 011116:IPR004027:IPR014018; KEGG: hor:Hore_16440 preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase domain protein; SecA Wing and Scaffold; SEC-C motif domain protein; SPTR: B8CYM4 protein translocase subunit secA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit" /codon_start=1 /transl_table=11 /product="protein translocase subunit secA" /protein_id="YP_003826890.1" /db_xref="GI:302391070" /db_xref="GeneID:9512278" /translation="MLGFLKKWLFKDPNEKELERIQPIVDKINGLEPQIQKLTDAELR AKTDEFKERLEEGETLDDLMPEAFAVVREASQRATEEGFRHYDVQVVGAIVLHEGKIA EMKTGEGKTLAATMPAYLNALTGNAVHIVTVNDYLAERDSEWMGQIYEFLGLDVGVIL EDMDTEERQEAYQADIVYGTNNQFGFDYLRDNMAIDKDDLVQGELSFAILDEVDSILI DEARTPLIISGPAESSPALYYKFARLAPRFKESKDYEVDEKANTVTLTEEGIARAEDI LDIDNLYLDENMDLHRHLKLSLRAKALMDKDEDYIVKDGEVHIVDEFTGRLMTGRRYG EGLHQAIEAKEGVEIQKETQTLASITFQNFFRMYDKLAGMTGTAATEAEEFDEIYDLD VVVVPTNEPVIREDYDDVIYQTEEAKFNAVVEDIIESHERGQPVLVGTRSIEKSEELS RKLRRNNIPHNVLNAKHHEQEAEIIKNAGQEGAVTIATNMAGRGTDIVLGDGVVDKGG LYVIGTERHESRRIDNQLRGRSGRQGDPGASQFYVSLEDDLMRLFGSDKISSVMDSLG LEEDQPIEHSLISRALENAQKKVESRNFEIRKQVLEYDNVMNKQRQVIYNQRRKILYG EDLKENILTMIEKLVDEKLEVYINEEVHHEEWDLEGLINYAETLFLEEGDLEIDDLAD CGRMKVKEKLLAVAKENYEAREEEVDSEVMRELEKIVMLKVVDQKWMDHLQAMDDLRQ GIGLRAYGQNDPLVEYKNEAYDMFQNMISSIREDIIKYIFRIELVSGELESRDSSINI GRGEVPSAYDTVRAQKEAEAKQAKRQQQKQQNQQPQKQQPIVKEEEPGRNDPCPCGSG EKYKRCCGR" misc_feature 294027..296378 /locus_tag="Acear_0276" /note="preprotein translocase subunit SecA; Reviewed; Region: PRK12904" /db_xref="CDD:183826" misc_feature 294309..>294677 /locus_tag="Acear_0276" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cl14882" /db_xref="CDD:197446" misc_feature 294714..295052 /locus_tag="Acear_0276" /note="SecA preprotein cross-linking domain; Region: SecA_PP_bind; pfam01043" /db_xref="CDD:144583" misc_feature 295248..295652 /locus_tag="Acear_0276" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(295347..295358,295416..295421,295488..295496) /locus_tag="Acear_0276" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(295512..295514,295599..295601,295611..295613, 295620..295622) /locus_tag="Acear_0276" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature 296565..296621 /locus_tag="Acear_0276" /note="SEC-C motif; Region: SEC-C; cl12132" /db_xref="CDD:196349" gene 296651..297752 /locus_tag="Acear_0277" /db_xref="GeneID:9512279" CDS join(296651..296719,296721..297752) /locus_tag="Acear_0277" /ribosomal_slippage /note="PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2" /codon_start=1 /transl_table=11 /product="bacterial peptide chain release factor 2 (bRF-2)" /protein_id="YP_003826891.1" /db_xref="GI:302391071" /db_xref="GeneID:9512279" /translation="MLEDKQARLEGLKGELAELRVSLDYDKLEEKHDQLRAEMSKPGF WDDSSRAQQISKEASALKDMMESFDRLEERLEEIEVLIELGQEEDDDSVTEEIKDKLQ GLEEDIEELELKVVMDGEYDQNSALLSINPGAGGIDSQDWAEMLLRMYNRWAEKKDYQ IETLEFMAGEEAGIKSVTLQINGPYAYGYLKAEKGVHRMVRVSPFDSSGRRHTSFASV EVLPEIEDDIDIDIEKNDLKIETYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSLR SQHKNRQKAMQILKAKLFDYMKEKQAEKLSEIRGEKKDISWGSQIRSYFFDPYQLIKD HRTNLEINNIEAVMDGELDPLIEAYLKETKRG" misc_feature join(296651..296719,296721..297749) /locus_tag="Acear_0277" /note="peptide chain release factor 2; Validated; Region: prfB; PRK00578" /db_xref="CDD:179072" misc_feature 296916..297230 /locus_tag="Acear_0277" /note="RF-1 domain; Region: RF-1; cl02875" /db_xref="CDD:194471" misc_feature 297372..297659 /locus_tag="Acear_0277" /note="RF-1 domain; Region: RF-1; cl02875" /db_xref="CDD:194471" gene 297757..298446 /locus_tag="Acear_0278" /db_xref="GeneID:9512280" CDS 297757..298446 /locus_tag="Acear_0278" /note="KEGG: hor:Hore_16420 hypothetical protein; SPTR: B8CYM2 Putative uncharacterized protein; PFAM: protein of unknown function (DUF2993)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826892.1" /db_xref="GI:302391072" /db_xref="GeneID:9512280" /translation="MKKLIGLIVAVLLISQLLLPVYFSRQLEQNLTQQLESAQSLEVE VNSLPALLMLGGRFQKVNLSGEELVVDGLKVAELEAKFSNIKFKSTNNRNEGQAFVGT NEELRLVFTEEELEDYLAERLSSLQNIVLNLGPEQTVLAGDFDFFGNPIKLKLGGKFK LETDQKLSFLPQDLMVAELRIPREVIERLMSEVNLTLDLTELPVPLQADEIRVKQNKL VILGGMEEDNV" misc_feature 297793..298146 /locus_tag="Acear_0278" /note="Protein of unknown function (DUF2993); Region: DUF2993; pfam11209" /db_xref="CDD:151651" gene 298439..300421 /locus_tag="Acear_0279" /db_xref="GeneID:9512281" CDS 298439..300421 /locus_tag="Acear_0279" /note="KEGG: hor:Hore_16410 hypothetical protein; SPTR: B8CYM1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826893.1" /db_xref="GI:302391073" /db_xref="GeneID:9512281" /translation="MYKKVLIILIIAGMITGAVIGYQRYQVETGNRSVELILDLKQWQ KLKLPPGVDLAALLEKYESQGVTSLAIIEQDLGDLEASGKVKLVTDLELRLLKETVGN NFQQMTSIFCRTPQLKQKIEERLSSYLGDNKVVTADRKLLAAEADQQQLVDFPIGFTA EQLDLARRSGLKVVPRFGNQAVDDSKAIKDRFSELNTLPQAALSQVIFSGTEVLGYPD YLSATAALIEEYDLQLGIIEPFIAEQTGVNRLANNLGPNNIRVHSADQQEFNLLPVEK LVDRYLRAVRERNVRGVYLKPILESKDGRSAVELTNQLVADLTAGLQAEGYSLAPAEP ISDFSSSLLFLFIINLAAVAALFYLVEYLFISEFPLVVAGRYKLILFLISALVSLVLI SQDYIFLTRELTALLVAIIFPTLAVVSTLFPYIFSNQEIENRIKALFNIFVRVSLITL SGGVLLVGALGSWHYMVKLRQFRGVKLSFIGPILLVIAYYLHYRFWLNREDYSFQALI DKANSLLNKNLKLKDLFLLIFLAVVGIIYIGRTGNQPLIPVPELELIIRDWLEQLLSV RPRFKSFLIGHPLLVMATWLIITGNRDWSIPVLLGGLVGQITVMNTFSHIHTPLWTSG VRVGLGLMLGFVIGILLVKLGRGLLIWKQKLRKELD" gene 300421..301524 /locus_tag="Acear_0280" /db_xref="GeneID:9512282" CDS 300421..301524 /locus_tag="Acear_0280" /note="COGs: COG2327 conserved hypothetical protein; InterPro IPR007345:IPR019896; KEGG: amt:Amet_4140 polysaccharide pyruvyl transferase; PFAM: polysaccharide pyruvyl transferase; SPTR: A1HT06 polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; PFAM: polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB" /codon_start=1 /transl_table=11 /product="polysaccharide pyruvyl transferase CsaB" /protein_id="YP_003826894.1" /db_xref="GI:302391074" /db_xref="GeneID:9512282" /translation="MKKIALAGYYGFDNAGDEAILAAIISSLRQRIDEEVEITVLSAN PARTEKLYNVSAVDRFSLIEIITVFYQADLLLLGGGSLLQDTTSQRSLLYYLGLVYLA HKINLSVVCYAQGVGPITSRLGKSLVPKVLNSAARLTVRDEESKELLVKLGVRKPIEV TVDPVFNLSLVSEERKQEIITAESLELKPPVIGVSVRHWTAESNDYLSVLAGVLDRIN HKLEGGILFLPLHYPHDLTASRKVKEQMETETKLLTGKYHPREIAGLFGECELVIGVR LHSLIFAAVNYVPLVGISYDPKVDSLLKRLDLRSAGRVTDLSATELYNQVLDIWQNRG QAEEKLRRKAVEMQQIAYDDIDSVRKLLKDRSD" misc_feature 300430..301332 /locus_tag="Acear_0280" /note="Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]; Region: WcaK; cl09156" /db_xref="CDD:195808" misc_feature <301201..301470 /locus_tag="Acear_0280" /note="Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]; Region: WcaK; cl09156" /db_xref="CDD:195808" gene 301525..302262 /locus_tag="Acear_0281" /db_xref="GeneID:9512283" CDS 301525..302262 /locus_tag="Acear_0281" /EC_number="2.4.1.187" /note="COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KEGG: hor:Hore_16390 glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; PRIAM: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; SPTR: B8CYL9 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family" /codon_start=1 /transl_table=11 /product="glycosyl transferase" /protein_id="YP_003826895.1" /db_xref="GI:302391075" /db_xref="GeneID:9512283" /translation="MEQIDILDVAVDQVNLDAAVAEIDRLIKNRTESHLVVTPNSEML VMAQQDLELKKILNQADLTVPDGIGVVWAARLLGAVMPERVAGIDLMKRLFSLAAQKD YQIYLLGGRPGIPFQAKRRILSEYPELRVIGEHHGYLDNKSEAYVIKEINQLQPDLLF VGMGVPLQEKWLVRNLPSLQASVGMGVGGSFDVLAGQKKRAPDWLQKLGLEWLYRLLQ EPKRFRRILALPKFVYLVTKRKILGLK" misc_feature 301693..302199 /locus_tag="Acear_0281" /note="The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common...; Region: Glyco_transf_WecG_TagA; cd06533" /db_xref="CDD:119439" gene 302274..303128 /locus_tag="Acear_0282" /db_xref="GeneID:9512284" CDS 302274..303128 /locus_tag="Acear_0282" /note="COGs: COG1284 conserved hypothetical protein; InterPro IPR003740:IPR019264; KEGG: hor:Hore_16380 hypothetical protein; PFAM: protein of unknown function DUF2179; protein of unknown function DUF161; SPTR: B8CYL8 Uncharacterized conserved protein; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826896.1" /db_xref="GI:302391076" /db_xref="GeneID:9512284" /translation="MKREIVYDYLGITLGSIFTAIGLVVFLVPNKIASGGISGLATVV YHLFNFPVGRTILVINVPLFIIGVKVLGTKFGVRTLYGILVLSLATDYLVPYLPVLTH DLLLAAIYGGVFVGTGLGLVFRFKGTTGGTDLVAQLVNYYFNISVGKALLMIDFCVIF SAAIAFNAEVALYALIALFITSKAIDLVQEGFNISKGAFIISDEDREIKEEILHKLDR GVTVLEGKGGYTNSDKEILLCIISRSEVTRLKNLVYNLDQEAFLIITDVHEVLGEGFN ESMVRRSE" misc_feature 302274..303110 /locus_tag="Acear_0282" /note="Uncharacterized conserved protein [Function unknown]; Region: COG1284" /db_xref="CDD:31475" misc_feature 302295..302537 /locus_tag="Acear_0282" /note="Uncharacterized BCR, YitT family COG1284; Region: DUF161; pfam02588" /db_xref="CDD:190354" misc_feature <302652..302828 /locus_tag="Acear_0282" /note="Uncharacterized BCR, YitT family COG1284; Region: DUF161; pfam02588" /db_xref="CDD:190354" misc_feature 302925..303089 /locus_tag="Acear_0282" /note="Uncharacterized protein conserved in bacteria (DUF2179); Region: DUF2179; cl10498" /db_xref="CDD:195976" gene 303157..303969 /locus_tag="Acear_0283" /db_xref="GeneID:9512285" CDS 303157..303969 /locus_tag="Acear_0283" /EC_number="2.2.1.1" /note="COGs: COG3959 transketolase N-terminal subunit; InterPro IPR005474; KEGG: pth:PTH_2750 transketolase, N-terminal subunit; PFAM: transketolase domain protein; SPTR: A5CYI8 transketolase, N-terminal subunit; PFAM: transketolase, thiamine diphosphate binding domain" /codon_start=1 /transl_table=11 /product="transketolase subunit A" /protein_id="YP_003826897.1" /db_xref="GI:302391077" /db_xref="GeneID:9512285" /translation="MTKIEDLEDKTTELRRSILKMVAKAGSGHPGGSLSAAEIVTALY FEEMNLDPANPDWEDRDRFVLSKGHAAPVLYAALAKKGYFPEEELQTLRDLDSHLQGH PDMNKTPGVDMTAGSLGQGLSAAVGMALAGKLDQKDYRVFAMVGDGEIQEGQIWEAAM SAANYKLDNLIAFTDYNQVQLIDKTEKVMNVHSVTDKFEAFGWYTIEIDGHELTEILE ALAEAREVTDKPVMIVANTVKGKGVSFMEDKAAWHGNAPDEEELEQALAELN" misc_feature 303190..303930 /locus_tag="Acear_0283" /note="Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the...; Region: TPP_TK; cd02012" /db_xref="CDD:48175" misc_feature order(303361..303363,303502..303504,303508..303510, 303595..303600,303610..303612,303685..303687, 303691..303693,303697..303699,303913..303915) /locus_tag="Acear_0283" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:48175" misc_feature order(303433..303435,303457..303462,303466..303468, 303505..303510,303514..303516,303604..303615, 303622..303627,303634..303636,303646..303648, 303694..303699,303745..303747) /locus_tag="Acear_0283" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48175" gene 303991..304932 /locus_tag="Acear_0284" /db_xref="GeneID:9512286" CDS 303991..304932 /locus_tag="Acear_0284" /EC_number="2.2.1.1" /note="COGs: COG3958 transketolase C-terminal subunit; InterProIPR020826:IPR005475:IPR005476:IPR015941:IPR 009014; KEGG: dae:Dtox_3967 transketolase central region; PFAM: transketolase central region; transketolase domain protein; SPTR: Q0PII0 transketolase C-terminal section; PFAM: transketolase, C-terminal domain; transketolase, pyrimidine binding domain" /codon_start=1 /transl_table=11 /product="transketolase subunit B" /protein_id="YP_003826898.1" /db_xref="GI:302391078" /db_xref="GeneID:9512286" /translation="MSEKIATRDAYGETLLELGTENEDIVVFDADVGSSTRVKHFAAE FPERFFQMGIAEQNMIGTAAGMATCGKIPFVSTFAVFGSARVADQIRNSIAYPELNVK IAVTHAGITVGADGATHQAIEDIGIMRSIPKMTVIVPGDAVEAKQVVRAAADYDGPVY MRFTRGGVPVVFDEEEYEFEWGKVMPVREGSDVTIFATGVMVGEALEAADTLAQEGIE AEVVNVHTIKPIDVEGVVAAAEKTGAVVTAEEHNIYNGLGSAVAEVLGENSPLPMQRV GIKDTFGRSGGPEELMDHFEISSEDVIGAVKDVMNKK" misc_feature 303991..304920 /locus_tag="Acear_0284" /note="Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]; Region: COG3958" /db_xref="CDD:33739" misc_feature 304015..304485 /locus_tag="Acear_0284" /note="Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins; Region: TPP_PYR_DXS_TK_like; cd07033" /db_xref="CDD:132916" misc_feature order(304057..304059,304063..304065,304081..304083, 304132..304134,304141..304143,304147..304164, 304171..304176,304180..304188,304243..304245, 304252..304257,304333..304335,304342..304344, 304390..304395,304456..304458) /locus_tag="Acear_0284" /note="PYR/PP interface [polypeptide binding]; other site" /db_xref="CDD:132916" misc_feature order(304081..304083,304141..304143,304150..304158, 304240..304245,304249..304251,304333..304335, 304339..304341,304366..304371,304375..304380, 304384..304386) /locus_tag="Acear_0284" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132916" misc_feature order(304150..304152,304156..304158,304231..304233, 304243..304245) /locus_tag="Acear_0284" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132916" misc_feature 304534..304896 /locus_tag="Acear_0284" /note="Transketolase, C-terminal domain; Region: Transketolase_C; pfam02780" /db_xref="CDD:145764" gene 305112..306329 /locus_tag="Acear_0285" /db_xref="GeneID:9512287" CDS 305112..306329 /locus_tag="Acear_0285" /EC_number="3.4.21.102" /note="COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151:IPR004447; KEGG: hor:Hore_16350 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; PRIAM: C-terminal processing peptidase; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: B8CYL5 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)" /codon_start=1 /transl_table=11 /product="carboxyl-terminal protease" /protein_id="YP_003826899.1" /db_xref="GI:302391079" /db_xref="GeneID:9512287" /translation="MFKRWGKLVGIVTLITLILGAGVLGFFIRGVQADDYLLAEEMPQ KFKIFENVLTIVQRYYVKEVELDKLLTGAIKGMLNSLEDPYTRYLSKEDYEDMQMNFE GEFGGIGIVVTMRHEELTIVSPIEGTPGSKADLQAGDIITQIDGESTEGMTIKKAVSL MKGEPGTEVILTIEREKDEEKEPEVIEVSITRAMIEVPYVESEIKEEGIGYIRIAQFA EEVGADVQQELKKLEEQNAEAVILDLRNNPGGMLKEAVKVASSFIPNGPVVHIKERNG EQETLLVSSEIKPSEHPLVVLVNEGSASASEIIAGAVQDTDNGVVMGNQTFGKGVVQS VIPLDDGSALKLTTARYYTPDERYINETGIEPDIKVEYDPDDTEQDEQLQRAIKYLKK KIKEQQEELKPAS" misc_feature 305238..>305384 /locus_tag="Acear_0285" /note="C-terminal processing peptidase family S41; Region: Peptidase_S41; cl02526" /db_xref="CDD:154960" misc_feature 305277..306257 /locus_tag="Acear_0285" /note="C-terminal peptidase (prc); Region: prc; TIGR00225" /db_xref="CDD:161775" misc_feature 305424..>305627 /locus_tag="Acear_0285" /note="PDZ domain of C-terminal processing-, tail-specific-, and tricorn proteases, which function in posttranslational protein processing, maturation, and disassembly or degradation, in Bacteria, Archaea, and plant chloroplasts. May be responsible for...; Region: PDZ_CTP_protease; cd00988" /db_xref="CDD:29045" misc_feature order(305430..305441,305445..305447,305580..305585, 305592..305597) /locus_tag="Acear_0285" /note="protein binding site [polypeptide binding]; other site" /db_xref="CDD:29045" misc_feature <305736..306224 /locus_tag="Acear_0285" /note="C-terminal processing peptidase; serine protease family S41; Region: Peptidase_S41_CPP; cd07560" /db_xref="CDD:143476" misc_feature order(306021..306023,306096..306098) /locus_tag="Acear_0285" /note="Catalytic dyad [active]" /db_xref="CDD:143476" gene 306366..307508 /locus_tag="Acear_0286" /db_xref="GeneID:9512288" CDS 306366..307508 /locus_tag="Acear_0286" /note="COGs: COG2861 conserved hypothetical protein; InterPro IPR006837; KEGG: amt:Amet_4438 protein of unknown function DUF610, YibQ; PFAM: protein of unknown function DUF610 YibQ; SPTR: A6TWE2 Putative uncharacterized protein; PFAM: Divergent polysaccharide deacetylase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826900.1" /db_xref="GI:302391080" /db_xref="GeneID:9512288" /translation="MNQKLGKICLIISGLLIISTLTACSSSTPTKTNVEKLNYIEISK DIKDKVNSYWQQQELDFRSEMEWGRKKKEMIAEREVSWQKNFQKIELPFPSSKEQELD RLLTGLKHKLTADEVKIELETESSGSEVAEAELTVKLQSAELKDKELTLYHLKMTQPK VKARMAFIIDDLGFNRDGTAELMEIDRPLTVAVLPFRPYSTSDAEKAVQAGHEILLHL PMEPSSPVSPGEGAIYTDMAPEEIRTTIQKGLASLGVEVAGVNNHMGSKVTADNKTMS VVLDYLHQQDLFFIDSSTAPRSVVPAAAREVGESYAVNHLFIDNIDDKERINKQIQYL ADVALKQGELITIGHIKPNTIQAIKELIPKLEEKGIQLVYVSELVK" misc_feature 306867..307505 /locus_tag="Acear_0286" /note="Divergent polysaccharide deacetylase; Region: Polysacc_deac_2; cl04721" /db_xref="CDD:194947" gene 308252..310243 /locus_tag="Acear_0287" /db_xref="GeneID:9512289" CDS 308252..310243 /locus_tag="Acear_0287" /note="COGs: COG0556 Helicase subunit of the DNA excision repair complex; InterProIPR006935:IPR001650:IPR001943:IPR009055:IPR 014001:IPR014021:IPR004807; KEGG: hor:Hore_16230 excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: B8CYK3 UvrABC system protein B; TIGRFAM: excinuclease ABC, B subunit; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit B" /protein_id="YP_003826901.1" /db_xref="GI:302391081" /db_xref="GeneID:9512289" /translation="MPQFELISDYTPCGDQPEAIEKLQAGVETGMQHQTLLGVTGSGK TFTMANLIEQVQKPTLVIAHNKTLAAQLCSEFREFFPHNAVEYFVSYYNYYQPEAYVP QTDTYIEKDASINEEIDRLRLAATSDLFEREDVIIVASVSCIYGLGSPTDYLDLTCSL ERGAVKERKEIIRELIYIQYERKDYDLDRGSFRVRGDVIEIHPAYEDRVYRVELFGDE VDRIREIDSITGEIKEELGGLTIYPASHFVTKEEKLKRAIKSIRAELEERLKELRSQD KLLEAQRLEQRTRYDLEMLEEVGFCQGIENYSRHLADREPGSRPQTLIDYFPDDFLLL IDESHKTIPQIGGMYAGDRSRKEKLVEHGFRLPSALDNRPLEFEEFESLINQAVYISA TPGPYEEEHSQQIVEQIIRPTGLVDPKIDVRPTEGQIDDLLAEIRKVVERDERVLITT LTKQMAEDLTEYLGSVGVQVRYLHSDIDTIERLEIIRDLRQGEFDVLVGINLLREGLD LPEVSLVAILDADKEGFLRSTRSLIQTIGRAARNVNGRVIMYGDKMTDSMQEAIEETN RRRRIQQEFNEENEITPQTIIKPVREVLRPVDMVAEESNVEYTTEESDERDPEDMTAE EIEKLIIELEAEMEEASDNLEFELAAQIRDEIEELNSLL" misc_feature 308252..310240 /locus_tag="Acear_0287" /note="excinuclease ABC subunit B; Provisional; Region: PRK05298" /db_xref="CDD:180000" misc_feature 308345..>308545 /locus_tag="Acear_0287" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 308372..308386 /locus_tag="Acear_0287" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 309515..309901 /locus_tag="Acear_0287" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(309602..309613,309671..309676,309749..309757) /locus_tag="Acear_0287" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(309773..309775,309851..309853,309863..309865, 309872..309874) /locus_tag="Acear_0287" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature 309896..310027 /locus_tag="Acear_0287" /note="Ultra-violet resistance protein B; Region: UvrB; pfam12344" /db_xref="CDD:192995" gene 310854..313664 /locus_tag="Acear_0288" /db_xref="GeneID:9512290" CDS 310854..313664 /locus_tag="Acear_0288" /note="COGs: COG0178 excinuclease ATPase subunit; InterPro IPR017871:IPR003439:IPR003593:IPR004602; KEGG: hor:Hore_16220 excinuclease ABC, A subunit; PFAM: ABC transporter related; SPTR: B8CYK2 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit A" /protein_id="YP_003826902.1" /db_xref="GI:302391082" /db_xref="GeneID:9512290" /translation="MVKDKIVIKGAQEHNLKDLDIEIPRNELVVITGLSGSGKSSLAF DTIYAEGQRRYVESLSAYARQFLGQMEKPKVEYIEGLSPSISIDQKNASQNPRSTVGT VTEIYDYLRLLYARVGTPHCPECDQEITSQTIDEIVDQVLELEERTKLQILAPIVKDR KGEHKELLEEMQREGYVRVKVDGEVKDLAEEINLDSNKRHRIEVVIDRLIIKDEIKER LTDSLETALDLGAGLVIVDVIDGKEQLFSANFACPDCGINLEELTPRMFSFNSPYGAC STCDGLGTKREFDPDLILDYDQSINDGAIIPWRRSRSKYYPQLLEALADHFGFSLDTP LKEFDEKIIDILIYGTSEEVSFRYTNRYNRTRMHTTKFKGVIGYLNRRLNEAKSDKGQ KKLEKYMSIGRCPDCEGGRLNPKSLAVTVGGRSIDEVTEISIEEAYNFFSELELSDRD RLIGGQILKEIRERLSFLNNVGLNYLTLGRSAGTLSGGESQRIRLATQIGSSLVGVLY ILDEPSIGLHQRDNERLINTLQDLRDVGNTVVVVEHDEETIREADHIIDMGPGAGKNG GEVVAQGDTEEIMEVEESLTGQYLSGKQEISVPEERQQPNGEYLEIKGARQHNLKDID VSLPLGLFTCITGVSGSGKSTLINEILNKRLMQEFYQSTEKPGDHDEVVGLDQIDKVV NIDQSPIGRTPRSNPATYTKVFDYIREVFAKTPEAKRRGYKKGRFSFNVKGGRCEACS GDGIIKIEMHFLADVYVPCEVCGGKRYNSETLEIKYKGKTIADVLDMTIEEALEFFDN IPKIKRRLQTLYDVGLGYIKLGQPSTTLSGGEAQRVKIAKELSKRSTGSTVYILDEPT TGLHFADVKKLLEVLKRLREGGNTVIVIEHNLEVIKSADYIVDLGPEGGKAGGEVIAT GTPEELIEMEGSYTGEYLQQVL" misc_feature 310854..313661 /locus_tag="Acear_0288" /note="excinuclease ABC subunit A; Reviewed; Region: uvrA; PRK00349" /db_xref="CDD:178984" misc_feature 310869..>311207 /locus_tag="Acear_0288" /note="The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep...; Region: ABC_UvrA_I; cd03270" /db_xref="CDD:73029" misc_feature <312090..312572 /locus_tag="Acear_0288" /note="The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep...; Region: ABC_UvrA_I; cd03270" /db_xref="CDD:73029" misc_feature 312681..313604 /locus_tag="Acear_0288" /note="The excision repair protein UvrA domain II; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep...; Region: ABC_UvrA_II; cd03271" /db_xref="CDD:73030" gene 313690..315513 /locus_tag="Acear_0289" /db_xref="GeneID:9512291" CDS 313690..315513 /locus_tag="Acear_0289" /note="COGs: COG0322 Nuclease subunit of the excinuclease complex; InterProIPR000305:IPR001943:IPR001162:IPR000445:IPR 010994:IPR009055:IPR003583:IPR004791; KEGG: hor:Hore_16210 excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; SMART: excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; SPTR: B8CYK1 excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit C" /protein_id="YP_003826903.1" /db_xref="GI:302391083" /db_xref="GeneID:9512291" /translation="MDLKKQLDNLPDASGVYLMKNKAGEVIYVGKAKSLRKRVRSYFQ KSRNHSFKTEALVKRIADIDYIITDSEVEALILEATMIKKHNPKFNIRLKDDKTYPYI KVTTNEDYPRVFKTRIVKKDGDRYFGPYTDVNAVHKTLKLLRDLFPLRDCKKNISCKE KKDRACLNYHIEKCLGPCVNSVDVDEYKSMVDEVCLFLKGKQQNLIEELKEEMEQAAD RQEFEQAAELRDQIEAIKKVTENQKVVSSDFADQDVMATSHQDDLACVQVMAVRNGRL VGEEDFIMEGTTPEAIDETLTAFLKQYYMNINYIPKEILLEIEIEDKEIMEDWLNEKR GSRVYLKTPQHGAKRQLINMAQRNAKYNLKDYLIKSDYKSRKPLKAVKELQTYLDLEE PPVRIEGFDISNIQGTDPVASLVVFENGTAQKGDYRRFKIKTVEGPDDFGMMQEVVKR RYSRLLEEDIKLPDLILIDGGKGQLNAVLEVLDELGIDNQPVIGLAKKEEEIFVEGQS EPIILPRDSEALYLLQRVRDEAHRFAVNYHRKLRSRRVTHSMLDDIPGIGQKRRERLL QYFGSLDKVRKASVEELSEVKGISEQIATTVYNYLREHTRP" misc_feature 313690..315501 /locus_tag="Acear_0289" /note="excinuclease ABC subunit C; Validated; Region: uvrC; PRK00558" /db_xref="CDD:179065" misc_feature 313729..313974 /locus_tag="Acear_0289" /note="GIY-YIG catalytic domain; Region: GIY-YIG; cl01061" /db_xref="CDD:194023" misc_feature 314296..314400 /locus_tag="Acear_0289" /note="UvrB/uvrC motif; Region: UVR; pfam02151" /db_xref="CDD:145355" misc_feature 314839..315294 /locus_tag="Acear_0289" /note="UvrC Helix-hairpin-helix N-terminal; Region: UvrC_HhH_N; pfam08459" /db_xref="CDD:149497" misc_feature 315349..315507 /locus_tag="Acear_0289" /note="Helix-hairpin-helix motif; Region: HHH_2; pfam12826" /db_xref="CDD:193301" gene complement(315626..316930) /locus_tag="Acear_0290" /db_xref="GeneID:9512292" CDS complement(315626..316930) /locus_tag="Acear_0290" /note="COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153; KEGG: cbi:CLJ_B3002 transporter, monovalent cation:proton antiporter-2 family; PFAM: sodium/hydrogen exchanger; SPTR: C3L244 transporter, monovalent cation:proton antiporter-2 family; PFAM: Sodium/hydrogen exchanger family" /codon_start=1 /transl_table=11 /product="sodium/hydrogen exchanger" /protein_id="YP_003826904.1" /db_xref="GI:302391084" /db_xref="GeneID:9512292" /translation="MTGEITEGLYQIQEWFVLNQVGDKVIYLIGLLIFLAWLVVLIAK KTKVPIVVGYVFLGILLSVELINQIPFLTKAQKSWYEFLIESFDYIPQLALAFIAFTI GSELSIKVLKNLGKKILYVVVLEAFGAFILVTLGILAIGQPLYLALLFGSIASATAPA ATVMVLKEYDAEGVLTSMILAIVGIDDAVALIIFSLIKPIALILYSGNGNLSLINSML LPLVEIGGSIALGLLLGYLSQKVLVGFEDKTKKVMTVTTTIVGGSAVAILVELSPLIT NMAIGFAYRNFAHKNLGIKDYLDTLTIPLYALFFILAGTEIRFTGIASVSFLTVAFTY TIARLIGKIGGASLGASLSNAPEKVKKYVGFGLLPQSGVAIALAYTVQKSFSEAPKVG LLVFNTLLFTSALTEVFGPLATKHAIFQAGEAQQEIQQDQPS" misc_feature complement(315686..316858) /locus_tag="Acear_0290" /note="Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]; Region: KefB; cl10482" /db_xref="CDD:164194" misc_feature complement(315704..316846) /locus_tag="Acear_0290" /note="Sodium/hydrogen exchanger family; Region: Na_H_Exchanger; pfam00999" /db_xref="CDD:189798" gene complement(316951..317394) /locus_tag="Acear_0291" /db_xref="GeneID:9512293" CDS complement(316951..317394) /locus_tag="Acear_0291" /note="COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: taf:THA_915 hypothetical protein; PFAM: hypothetical protein; SMART: hypothetical protein; SPTR: B7IH10 hypothetical protein; PFAM: CBS domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826905.1" /db_xref="GI:302391085" /db_xref="GeneID:9512293" /translation="MSRVKKYMMRSLNSVSEEDTVQEVIKAMHKMEMSVLPVVDEENR FLGSIYGENILRNIIPEQYGMLESHRLLYEINQAAENLKEIESNKIKEYMSTNTSVVK EMDNMNNLADIMLDNEESYLYVVNEEGKLRGYISRGDLLYYLSEE" misc_feature complement(316972..317385) /locus_tag="Acear_0291" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature complement(316966..317355) /locus_tag="Acear_0291" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair; cd02205" /db_xref="CDD:73081" gene complement(317397..318344) /locus_tag="Acear_0292" /db_xref="GeneID:9512294" CDS complement(317397..318344) /locus_tag="Acear_0292" /note="COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); InterPro IPR011611; KEGG: tex:Teth514_0576 1-phosphofructokinase; PFAM: PfkB domain protein; SPTR: B0K451 1-phosphofructokinase; PFAM: pfkB family carbohydrate kinase" /codon_start=1 /transl_table=11 /product="PfkB domain protein" /protein_id="YP_003826906.1" /db_xref="GI:302391086" /db_xref="GeneID:9512294" /translation="MITTVTLNPAIDREYFVKNDNPGHHQYIYEDQEINVSPGGKGLI SAINLKYLGYSDVQNIGFVGGQQGLFFENMVQEYKVTTNYIYTEDEMRNNIYIIGREP VTYTHYNDYTYHVGASNVKQLLKRFKRSITDSNLIMISGSIPKGVSSSIYQDLVKISH QKEKKVYLHASGETLTYALQENPQFVVPYFKHTDKILKEKVESLEDYIKAGKKMQEMG VEHISIPFHCDRLVFYNNRVYSISTEDFYLINWLGAGEAYNAAFFDHIFREGFDVIET NRYAGAAALAVAEKKEIFLNSRSEIEDKLDLINIEEVDL" misc_feature complement(317403..318344) /locus_tag="Acear_0292" /note="Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]; Region: FruK; COG1105" /db_xref="CDD:31302" misc_feature complement(317508..318344) /locus_tag="Acear_0292" /note="1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose...; Region: FruK_PfkB_like; cd01164" /db_xref="CDD:29349" misc_feature complement(order(317925..317927,318168..318170, 318174..318176,318195..318197,318207..318209)) /locus_tag="Acear_0292" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:29349" misc_feature complement(order(317577..317579,317583..317585, 317655..317657,317670..317672,317778..317780, 317784..317786,317838..317840)) /locus_tag="Acear_0292" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:29349" gene complement(318459..318701) /locus_tag="Acear_0293" /db_xref="GeneID:9512295" CDS complement(318459..318701) /locus_tag="Acear_0293" /note="KEGG: hor:Hore_06450 hypothetical protein; SPTR: B8D2H5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826907.1" /db_xref="GI:302391087" /db_xref="GeneID:9512295" /translation="MEPIFKQIEQHMKFGGMKVRNEVPVEEINDFILNLPENKRDSWS EVVQILEDEDMITMEGDFSTIDDELLDAQVEENRRI" gene 318965..319312 /locus_tag="Acear_0294" /db_xref="GeneID:9512296" CDS 318965..319312 /locus_tag="Acear_0294" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826908.1" /db_xref="GI:302391088" /db_xref="GeneID:9512296" /translation="MLALQQDVAVSASEVACCKISTNCAKLSEEAFKTKSMKILCCNT ANSQYMLTATPIGDNHSDMSIASSQHFSGATLKTDLEPRTAEGQFLRMSETGRRTNGK RKRFVDYNLQYHE" gene 319496..320455 /locus_tag="Acear_0295" /db_xref="GeneID:9512297" CDS 319496..320455 /locus_tag="Acear_0295" /EC_number="1.1.1.27" /note="COGs: COG0039 Malate/lactate dehydrogenase; InterProIPR018177:IPR001236:IPR016040:IPR015955:IPR 001557:IPR011304; KEGG: hut:Huta_0463 L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: C7NS43 L-lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase" /codon_start=1 /transl_table=11 /product="L-lactate dehydrogenase" /protein_id="YP_003826909.1" /db_xref="GI:302391089" /db_xref="GeneID:9512297" /translation="MVSEKEGVKIGIIGAGFVGSTTAFTVMMNGLASEIVLVDIDQDK AEGEAMDLRHGASFVSPVNIETGGYQECQDADIVIITAGASQEPGETRLDLTKRNVEI FKDMIPKLTAEINSDTLLLVVTNPVDILSYVTWKLSDLPARQVIGSGTVLDSSRFRYI LSQRCDIDARNIHGYIIGEHGDSEVPVWSATNIVGVPFEEFDEVCNQKKNNDDKSELI SKIKNVAYEIIDRKGATYYAIALAINRIVKGIIRDENSILTLSTLLQGEYGFSDVYLS LPCIINRNGIREILELELSPAEQEALNTSAEVLQDLIGGKLNI" misc_feature 319508..320440 /locus_tag="Acear_0295" /note="L-lactate dehydrogenase; Reviewed; Region: ldh; PRK00066" /db_xref="CDD:178836" misc_feature 319517..320434 /locus_tag="Acear_0295" /note="A subgroup of L-lactate dehydrogenases; Region: LDH_2; cd05292" /db_xref="CDD:133428" misc_feature order(319541..319549,319610..319615,319625..319627, 319742..319744,319790..319792,319868..319870, 320195..320200) /locus_tag="Acear_0295" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:133428" misc_feature order(319553..319558,319565..319567,319580..319582, 319637..319639,319643..319648,319655..319660, 320165..320167,320174..320179,320189..320191, 320201..320209,320216..320218) /locus_tag="Acear_0295" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133428" misc_feature order(319868..319870,320033..320035,320168..320170, 320180..320182) /locus_tag="Acear_0295" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133428" misc_feature order(319997..319999,320006..320008,320012..320014, 320018..320020,320069..320071,320075..320080, 320255..320260,320264..320266,320354..320359, 320363..320365) /locus_tag="Acear_0295" /note="tetramer (dimer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:133428" gene 320712..321008 /locus_tag="Acear_0296" /db_xref="GeneID:9512298" CDS 320712..321008 /locus_tag="Acear_0296" /note="COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: hor:Hore_13320 hypothetical protein; PFAM: protein of unknown function DUF156; SPTR: B8CXR3 Uncharacterized protein conserved in bacteria; PFAM: Uncharacterised BCR, COG1937" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826910.1" /db_xref="GI:302391090" /db_xref="GeneID:9512298" /translation="MSKKTEEMNSYSEEKDELITRLKRIEGQVRGIQRMIDEEKYCVD VLTQVAAAKAALNKVGMTVLRNHTHGCVREAVSEGENGEEIIDELMSVISKFTN" misc_feature 320754..320996 /locus_tag="Acear_0296" /note="Transcriptional regulators CsoR (copper-sensitive operon repressor), RcnR, and FrmR, and related domains; this domain superfamily was previously known as DUF156; Region: CsoR-like_DUF156; cd10148" /db_xref="CDD:197385" misc_feature order(320754..320756,320763..320768,320775..320780, 320787..320789,320796..320801,320805..320810, 320817..320828,320832..320840,320844..320852, 320856..320861,320865..320870,320877..320882, 320889..320894,320898..320906,320910..320918, 320925..320927,320952..320954,320958..320960, 320964..320993) /locus_tag="Acear_0296" /note="putative homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:197385" misc_feature order(320754..320756,320763..320768,320775..320780, 320787..320789,320796..320801,320805..320810, 320817..320828,320832..320840,320844..320852, 320856..320861,320865..320870,320877..320882, 320889..320891,320898..320900,320910..320912, 320973..320975,320982..320993) /locus_tag="Acear_0296" /note="putative homodimer interface [polypeptide binding]; other site" /db_xref="CDD:197385" misc_feature order(320832..320834,320910..320912,320973..320975) /locus_tag="Acear_0296" /note="putative allosteric switch controlling residues; other site" /db_xref="CDD:197385" misc_feature order(320835..320837,320910..320912,320922..320924) /locus_tag="Acear_0296" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:197385" misc_feature order(320892..320894,320901..320906,320913..320918, 320922..320927,320952..320954,320958..320960, 320964..320972,320976..320981) /locus_tag="Acear_0296" /note="putative homodimer-homodimer interface [polypeptide binding]; other site" /db_xref="CDD:197385" gene 321031..321465 /locus_tag="Acear_0297" /db_xref="GeneID:9512299" CDS 321031..321465 /locus_tag="Acear_0297" /note="COGs: COG3086 Positive regulator of sigma E activity; InterPro IPR007359; KEGG: ckr:CKR_1159 hypothetical protein; PFAM: Positive regulator of sigma(E) RseC/MucC; SPTR: B9E135 Putative uncharacterized protein; PFAM: Positive regulator of sigma(E), RseC/MucC" /codon_start=1 /transl_table=11 /product="positive regulator of sigma E, RseC/MucC" /protein_id="YP_003826911.1" /db_xref="GI:302391091" /db_xref="GeneID:9512299" /translation="MREYAKVVEVNDELATVEIQRHGSCDKCGKCGDDNDIEVEATNP IGAKEGDVVAIELRDSNVFGAALVVYFVPLLSLFLGYFIGQWFSGNYGFGSSDLVGAL VGISSMVISFLFVRKYGEINNSKGKYQPEITRTVDPISEDLG" misc_feature 321049..321438 /locus_tag="Acear_0297" /note="Positive regulator of sigma(E), RseC/MucC; Region: RseC_MucC; cl01178" /db_xref="CDD:186372" gene 321575..322375 /locus_tag="Acear_0298" /db_xref="GeneID:9512300" CDS 321575..322375 /locus_tag="Acear_0298" /note="COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR013200:IPR000150:IPR006379; KEGG: drm:Dred_3056 Cof-like hydrolase; PFAM: haloacid dehalogenase type 3; SPTR: A4J905 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB" /codon_start=1 /transl_table=11 /product="Cof-like hydrolase" /protein_id="YP_003826912.1" /db_xref="GI:302391092" /db_xref="GeneID:9512300" /translation="MKYKLLAIDIDDTLLSDELVISSRVKNKIKQAVAADTLVTIATG RMYSSALPYAKQLELDLPLITYNGALIKETISDKVIDHQPVSVELAQKIGFLADREDW HLNIYLDDKLYVTKLGPEIKRYEEIAGIESILVEEEITDFLVQPPTKLLIIGPNPEQT DEILTKVSDEFETDLNITQSKSTFVEIMQQNVSKGVALKRLAEKFEIKKNEVIAIGDS LNDLEMIEYAGLGVAVANGADELKRRADYVTETNEEDGVAGVIDKFIL" misc_feature 321590..322357 /locus_tag="Acear_0298" /note="haloacid dehalogenase-like hydrolase; Region: Hydrolase_3; pfam08282" /db_xref="CDD:116866" misc_feature <322103..322360 /locus_tag="Acear_0298" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" gene 322399..323442 /locus_tag="Acear_0299" /db_xref="GeneID:9512301" CDS 322399..323442 /locus_tag="Acear_0299" /EC_number="3.5.4.4" /note="COGs: COG1816 adenosine deaminase; InterPro IPR001365:IPR006330; KEGG: ckr:CKR_0749 hypothetical protein; PFAM: adenosine/AMP deaminase; PRIAM: adenosine deaminase; SPTR: C6PR51 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; TIGRFAM: adenosine deaminase" /codon_start=1 /transl_table=11 /product="adenosine deaminase" /protein_id="YP_003826913.1" /db_xref="GI:302391093" /db_xref="GeneID:9512301" /translation="MEKLIRKLPKTELHLHLDGSLRVKTVLELAEDREIELPTADQKG LAEYLQVSEDCDSLAEYLEKFDLPLKVMQTEKALTRVTYELLEDAAWENVKYLEIRFA PLLLTEELRPAEVVEAVLAGVEKGENKYELQANIILCCMRHQDPSRSIETAQLAVDYS DQGVVGLDLAGDEANFPPEEHEEAFKLAAGAGLHRTVHAGETAGAKNVKKAIDYLNAE RIGHGIRSKEDKETLETIKEAGVTLEICPTSNLHTNAVTDLEQHPIREYYEAGIPITV NTDNRTVSNLTLSQEYLMLYREFGFSLAEIQELILSGIKAAFISDKEQEKLITEFKSE FETIAGIDNKILE" misc_feature 322417..323391 /locus_tag="Acear_0299" /note="Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in...; Region: ADA; cd01320" /db_xref="CDD:30063" misc_feature order(322438..322440,322444..322446,322990..322992, 322999..323001,323062..323064,323233..323238) /locus_tag="Acear_0299" /note="active site" /db_xref="CDD:30063" misc_feature order(322444..322446,322450..322452,322909..322911, 322999..323001,323233..323238) /locus_tag="Acear_0299" /note="purine riboside binding site [chemical binding]; other site" /db_xref="CDD:30063" gene 323459..325090 /locus_tag="Acear_0300" /db_xref="GeneID:9512302" CDS 323459..325090 /locus_tag="Acear_0300" /note="COGs: COG4365 conserved hypothetical protein; InterPro IPR011199; KEGG: drm:Dred_1174 hypothetical protein; PFAM: protein of unknown function UCP012535; SPTR: C0GG04 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2317)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826914.1" /db_xref="GI:302391094" /db_xref="GeneID:9512302" /translation="MADNLAVNNSIYADYLSNFEQVADFYEYIPDKLEAYEVRSDYLR ENYRQDRDELIDILYKYNQNLEARQEVIENIELLRRKETTAVVTGQQAGIFTGPLYTV YKAITAILLAEEKKKLLDDPVVPIFWVASEDHDFQEINHLTLVNTSNELDRIEFSDDY IATSIGDIDPQEKLFDLIDVLEEKTYNTEFKPEIMAELREAAHKATDLADWFSRVLLN LFGNYGLIIFDPMWPEVRELSSELYQQFITKQSKLQQRFKETNSKLQNQGYSLQIEKE ETNSHLFVYQDGKRHSLLKIDGEFRTRNYQFRAEEDDILERIKDKPTDFSPNVVLRPI LQNWLLPVIAYVGGPSEIAYHAQLKELYSLFGLEMPILYPRQSITIVEARLAEYMEKY GLTEEDIVQQRLTERLEEELEVRDKLDIPGVFKGVKEEFKEEYRNLIDKISKIDKNLE GLGKDNLERIIGQVEYLEDKTKQFHQKNNKILLRQFKKLRNNLLPQDKLQERVFNVMP YLIKYGTDFIDELVDYFDLSFEHRFYYLGGEENDS" misc_feature 323483..325066 /locus_tag="Acear_0300" /note="Uncharacterized protein conserved in bacteria (DUF2317); Region: DUF2317; pfam10079" /db_xref="CDD:150721" misc_feature 323483..325060 /locus_tag="Acear_0300" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG4365" /db_xref="CDD:34077" gene 325080..325790 /locus_tag="Acear_0301" /db_xref="GeneID:9512303" CDS 325080..325790 /locus_tag="Acear_0301" /note="COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: drm:Dred_2324 LmbE family protein; PFAM: LmbE family protein; SPTR: C0GG03 LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase" /codon_start=1 /transl_table=11 /product="LmbE family protein" /protein_id="YP_003826915.1" /db_xref="GI:302391095" /db_xref="GeneID:9512303" /translation="MTVDLLAFGAHPDDVEIGAGGTLIKHHSDGYKTGIVDLTAGEMG SNGTPQIRRKEALAASEVLGAEFRHCLKLPDAKISRDEEAIKSIVKEIRAAKPKVVLA PYWKDRHPDHVNTSKLVTESCFKAGLKKFEATGPPYRPQAVVYYFLAAVDEPDFIVDI AEEYETKTEALLCHTSQVSYNQEHDFQTVLNDSTFLDKLDARFRYLGSLVDAQYGEGF KYKQTIKVSDLTMLEGGV" misc_feature 325083..325757 /locus_tag="Acear_0301" /note="GlcNAc-PI de-N-acetylase; Region: PIG-L; cl00929" /db_xref="CDD:193977" gene 325793..326914 /locus_tag="Acear_0302" /db_xref="GeneID:9512304" CDS 325793..326914 /locus_tag="Acear_0302" /note="COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: hmo:HM1_2041 glycosyl transferase, group 1 family protein, PFAM: glycosyl transferase group 1; SPTR: C0GG02 glycosyl transferase group 1; PFAM: glycosyl transferases group 1" /codon_start=1 /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_003826916.1" /db_xref="GI:302391096" /db_xref="GeneID:9512304" /translation="MKIGIVCYPSYGGSGVVATELGKQLAKQGHKIHFISYEPPFRLE QYYENIYFHQVEVPTYPLFKFPPYSLVLTNKINELITEEDLDIIHAHYAIPHSLAAYL ACEITKGTEVKLITTLHGTDITLVGGQSSFKNITRFSIGASDGVTAVSDSLRQDAIDR FDLSPKKVKRIYNFIDTTEYRRQKPEEPLQLTEGEEKIIIHISNFRDVKNIPDVIKIF SLINKEVSSKLVLVGDGPNRHSAKKLVDELDLADKVYFLGKQDNIIPLLSVSDLFLLP SEKESFGLVALEAMACEVPVVASNSGGLPEVVIDGVTGFLSDPGAIEEMAHNGIELLE NVELHNQFAQNARHRVVTNFSAAEIVEEYQEYYQRLMNN" misc_feature 325793..326905 /locus_tag="Acear_0302" /note="N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA; Region: thiol_BshA; TIGR03999" /db_xref="CDD:188514" misc_feature 325793..326902 /locus_tag="Acear_0302" /note="This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule...; Region: GT1_like_5; cd04962" /db_xref="CDD:100002" gene 327010..328410 /locus_tag="Acear_0303" /db_xref="GeneID:9512305" CDS 327010..328410 /locus_tag="Acear_0303" /note="COGs: COG1109 phosphomannomutase; InterProIPR016066:IPR005844:IPR005845:IPR005846:IPR 005843:IPR016055:IPR005841; KEGG: nth:Nther_1132 phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: B2A1H5 phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase, C-terminal domain; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific" /codon_start=1 /transl_table=11 /product="phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I" /protein_id="YP_003826917.1" /db_xref="GI:302391097" /db_xref="GeneID:9512305" /translation="MAIEFGTDGWRAVIADEFTFSNFKVVVQAVANYLQNNDQTESGI FIGYDNRFLAEEFAQTAAEVLTANGIQAIVAKEALPTPVTAFTIQDNKLDGALMLTAS HNPASYQGIKFIPHYAGPALPEITDQIEEEVVQVQESGEIHSCQSEEAAEIKEFNPKA DYLDHLQEMIDFSDQKLKILADPMYGPGAGYLTDIFADTEVEIEEINDYRDPLFGGGM PEPTEDELPELIDRVQTEDYDLGFALDGDADRFGIITEQGKYLSPNQVLFLLLDHLVE SKGETGGVVRTVATTHMLDKIAKEHDLDVFETPVGFKYVGELMMNKDIIIGGEESGGL SIKGHIPEKDGLLACALIAEMVMDREEKLSVILEKVEKKYGKLISERLDIECGSEEKP EVLERIKNFDVDEIAGYKVIEQITKDGMKVVLEDGSWCLMRPSGTEPLIRVYVETSDY ELMEQIQAEVREELQI" misc_feature 327010..328404 /locus_tag="Acear_0303" /note="Phosphomannomutase [Carbohydrate transport and metabolism]; Region: {ManB}; COG1109" /db_xref="CDD:31306" misc_feature 327016..328395 /locus_tag="Acear_0303" /note="This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria. The alpha-D-phosphohexomutases include several related enzymes that catalyze a...; Region: PGM_like2; cd05800" /db_xref="CDD:100093" misc_feature order(327025..327027,327031..327033,327040..327042, 327313..327321,327343..327345,327742..327744, 327748..327750,327754..327759,327874..327876, 327937..327945,327994..327996,328000..328002, 328006..328008,328306..328308,328312..328320, 328333..328335) /locus_tag="Acear_0303" /note="active site" /db_xref="CDD:100093" misc_feature order(327031..327033,327313..327315,327757..327759, 327874..327876,327937..327939,327943..327945, 327994..327996,328000..328002,328006..328008, 328306..328308,328312..328320,328333..328335) /locus_tag="Acear_0303" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100093" misc_feature order(327313..327315,327742..327744,327748..327750, 327754..327756) /locus_tag="Acear_0303" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:100093" gene 328569..328976 /locus_tag="Acear_0304" /db_xref="GeneID:9512306" CDS 328569..328976 /locus_tag="Acear_0304" /note="COGs: COG1833 conserved hypothetical protein; InterPro IPR000305:IPR002837; KEGG: hor:Hore_02280 hypothetical protein; PFAM: protein of unknown function DUF123; SMART: excinuclease ABC C subunit domain protein; SPTR: B8D120 Uncharacterized conserved protein; PFAM: Domain of unknown function DUF123" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826918.1" /db_xref="GI:302391098" /db_xref="GeneID:9512306" /translation="MSSELESGIYNLIISLKEDCKIKVGSLGEFEFKSGYYIYTGTAQ QNLSARIERHRSKNKKLHWHIDYLLQKAEVIEVKTWAKDREAECQIHQKLAIKPEFTE PVVGFGASDCSCKTHLLYSPQKPEVEKELIVEV" misc_feature 328653..328934 /locus_tag="Acear_0304" /note="Domain of unknown function DUF123; Region: DUF123; cl00790" /db_xref="CDD:153999" gene 329004..330044 /locus_tag="Acear_0305" /db_xref="GeneID:9512307" CDS 329004..330044 /locus_tag="Acear_0305" /note="COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR002638; KEGG: mta:Moth_1836 nicotinate phosphoribosyltransferase; PFAM: quinolinate phosphoribosyl transferase; SPTR: C0GJC1 quinolinate phosphoribosyl transferase; PFAM: quinolinate phosphoribosyl transferase, C-terminal domain; quinolinate phosphoribosyl transferase, N-terminal domain" /codon_start=1 /transl_table=11 /product="quinolinate phosphoribosyl transferase" /protein_id="YP_003826919.1" /db_xref="GI:302391099" /db_xref="GeneID:9512307" /translation="MTNRELENLEDVNNVTISKDRILHSANHDEIKQGLTTDVYFIKT REILNELDLSQTEVVVDIFASREGVAAGIDEAVNLLQDKDVEVWGLEEGSRMDKKEVI LRIKGVYNEFGIFETSLLGSLASASGWATAAAECKEAADDIPVLCFGARHLHPAVAPV MERSAIIGGADGASCILGAKLAGQKPSGTVPHALILTVGDTLKVAQAYDEVMPDDAAR IIIVDTFKDEAEESLRLADSLKESLDGIRLDTPSERGGVTPDLVKEVRARLDQAGHDY VNIFVSGGITPERILNLKDLGVDGFGVGSYIAGAEAINMTMDIKEVDGKAIAKRGRIP GVAENKRLKRLL" misc_feature 329061..330038 /locus_tag="Acear_0305" /note="nicotinate phosphoribosyltransferase; Reviewed; Region: PRK08662" /db_xref="CDD:181529" misc_feature 329103..329999 /locus_tag="Acear_0305" /note="Phosphoribosyltransferase (PRTase) type II; This family contains two enzymes that play an important role in NAD production by either allowing quinolinic acid (QA) , quinolinate phosphoribosyl transferase (QAPRTase), or nicotinic acid (NA), nicotinate...; Region: PRTase_typeII; cl12019" /db_xref="CDD:187164" misc_feature order(329451..329459,329520..329525,329748..329750, 329847..329852,329907..329909,329913..329918, 329925..329927) /locus_tag="Acear_0305" /note="active site" /db_xref="CDD:29612" gene 330060..331031 /locus_tag="Acear_0306" /db_xref="GeneID:9512308" CDS 330060..331031 /locus_tag="Acear_0306" /note="COGs: COG1940 transcriptional regulator/sugar kinase; InterPro IPR000600:IPR004654; KEGG: hor:Hore_16050 glucokinase; PFAM: ROK family protein; SPTR: B8CYI5 Glucokinase; TIGRFAM: glucokinase, ROK family; PFAM: ROK family; TIGRFAM: ROK family protein ( glucokinase)" /codon_start=1 /transl_table=11 /product="glucokinase, ROK family" /protein_id="YP_003826920.1" /db_xref="GI:302391100" /db_xref="GeneID:9512308" /translation="MAGYVIGVDLGGTKILTVLANLQGEIIAKKRSATKSEQGAEKVI DRILTTIDQVLADSDLTIDEIEAIGVGAPGPLSVKEGIIHHAPNLGWKDLNLKQLLES ELNIPVFIENDANTAALGSKWFGAGKDKQNMIYLTVSTGIGSGIIIDNKLYHGISDSA GEVGHMVLDPESDVRCRCGDYGCWEALASGTALGRLGQKAVSSSSYSLMEELVDSTDQ IDGAVVTEAAAQGDKTAKKILNQVTNYLGIGIANLLNILNPELIVVGGGVSQAGDIVL EPVREIALKRAMETPAKEVEIVRTQLGDNIGAIGAVAKALTQLGILN" misc_feature 330075..330992 /locus_tag="Acear_0306" /note="ROK family protein (putative glucokinase); Region: ROK_glcA_fam; TIGR00744" /db_xref="CDD:162017" misc_feature 330078..330638 /locus_tag="Acear_0306" /note="FGGY family of carbohydrate kinases, N-terminal domain; Region: FGGY_N; cl09121" /db_xref="CDD:195797" gene 331155..332030 /locus_tag="Acear_0307" /db_xref="GeneID:9512309" CDS 331155..332030 /locus_tag="Acear_0307" /note="COGs: COG4945 Membrane-anchored protein predicted to be involved in regulation of amylopullulanase; InterPro IPR015922:IPR008960:IPR019248; KEGG: kol:Kole_1458 glycoside hydrolase family 57; PFAM: protein of unknown function DUF2223; SPTR: C5CEB0 Glycoside hydrolase family 57; PFAM: Domain of unknown function (DUF2223)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826921.1" /db_xref="GI:302391101" /db_xref="GeneID:9512309" /translation="MVERKVKLLIGLMLILLISASAVTAQEALFDMEDPEGDDYGPGT YVYPTSEQFAPFEGLFDLRRVRVEERESDYSFRFKFGTVTNPWHAPYGFSHQLIQVYI DNQDSGATTVFKKGANVKFSKESSWNKLIKITGWNIKVFDYQDDLSQETEPVVDAEAK VLEDKQTIQARIPKELIGSLDSARYYVLIGSLDGFSYDNYRPVIEEVDDWKFGGGTDT QYNPNVLDILVPEDKSQKEILSGYDVEEEELATLYPVGNESIMSSKFLLTVIMLVVII VAVIIVRYRKRIFNK" misc_feature 331239..331889 /locus_tag="Acear_0307" /note="DOMON-like domain of various glycoside hydrolases; Region: DOMON_glucodextranase_like; cd09626" /db_xref="CDD:187684" misc_feature order(331449..331451,331542..331544,331548..331550, 331716..331718) /locus_tag="Acear_0307" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:187684" gene 332141..332464 /locus_tag="Acear_0308" /db_xref="GeneID:9512310" CDS 332141..332464 /locus_tag="Acear_0308" /note="InterPro IPR005085; KEGG: hor:Hore_16020 carbohydrate binding family 25; PFAM: carbohydrate binding family 25; SPTR: B8CYI2 carbohydrate binding family 25; PFAM: carbohydrate binding domain (family 25)" /codon_start=1 /transl_table=11 /product="carbohydrate binding family 25" /protein_id="YP_003826922.1" /db_xref="GI:302391102" /db_xref="GeneID:9512310" /translation="MAEFDNVNIDPTPITAGENVTIEYDGLLSEAGAEEVYLHAGVGK EEWNDVKTIRMNRAPDGSWKTTVRLNTTQDFKFCFKDAAENWDNNNGHNWSYQVHNGE QHSFS" misc_feature 332189..332434 /locus_tag="Acear_0308" /note="Carbohydrate binding domain (family 25); Region: CBM_25; pfam03423" /db_xref="CDD:190631" gene complement(332566..333228) /locus_tag="Acear_0309" /db_xref="GeneID:9512311" CDS complement(332566..333228) /locus_tag="Acear_0309" /note="COGs: COG3330 conserved hypothetical protein; KEGG: dau:Daud_1046 hypothetical protein; SPTR: B1I3I6 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826923.1" /db_xref="GI:302391103" /db_xref="GeneID:9512311" /translation="MSTNLNQEQQERIQMRPAIEAIKPNIEFFTTHDYPELADYDLET SFNQNRITALVRDPYWVYLYWEVTELFEMNGQPVLKVLDITGLNYPHASPQDSFTVDI DLRAENWYLKVPGANRKYTVELGLQKENGEFNLLARSNYFTTPRDKPSDKYDPEWMTI DELFRCSYPSSNSDGTLKTGSSPLGAEEFPGVGINVSSPVGPEEYVSSPGYISSPQNE DW" misc_feature complement(<332734..333114) /locus_tag="Acear_0309" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3330" /db_xref="CDD:33139" gene complement(333405..335030) /locus_tag="Acear_0310" /db_xref="GeneID:9512312" CDS complement(333405..335030) /locus_tag="Acear_0310" /note="COGs: COG1543 conserved hypothetical protein; InterPro IPR011330:IPR004300:IPR015293; KEGG: pth:PTH_2228 hypothetical protein; PFAM: Domain of unknown function DUF1957; glycoside hydrolase family 57; SPTR: Q1PXF9 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1957); glycosyl hydrolase family 57" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826924.1" /db_xref="GI:302391104" /db_xref="GeneID:9512312" /translation="MEQGYLSFVLHAHLPHVRHPENEDVMEEEWLYEAITETYIPLIN TFDNLIEDGIEFKLTLSLSPPLLAMLTDPLLQERYLNHLDELIELAEKEVERTSREAP EHHKMAKRYAYLFKEARYVFAEKYDRNLVSAFKKFQDQGYLEVITSSATHAFLPFFDL YPEAVKSQIDTGINEYYKHFDQKPPGFWLPECGYQPGHDEFLAQQDVRYFFTDSHGIL HADTRPKYGVYAPIYTESGVAAFGRDMESSKQVWSANEGYPGDYDYREFYRDIGYDLD YDYIEPYIHASGERKDTGIKYHRITGEGDHKEPYNPEWAANKADMHAEDFIQNRVQQI DYLADKMDRKPIIISPYDAELYGHWWYEGVQWLDFVIRKVACDYDSITLTSPGDYLNE YKTNQVATPSYSSWGYKGYGEVWLQEDNDWIYRHLHWATEKMVEIANEYPHASGLKYE ALNQLTRELLLAQSSDWPFIMKTGTMVEYAVRRVKTHLTRFKSLYHEIKDDDIDVHVL RKLQHYDNIFPEIDYRIYRSDNISSELRQELIQ" misc_feature complement(333447..335021) /locus_tag="Acear_0310" /note="Uncharacterized conserved protein [Function unknown]; Region: COG1543" /db_xref="CDD:31732" misc_feature complement(333453..333758) /locus_tag="Acear_0310" /note="Domain of unknown function (DUF1957); Region: DUF1957; pfam09210" /db_xref="CDD:192230" gene 335220..336422 /locus_tag="Acear_0311" /db_xref="GeneID:9512313" CDS 335220..336422 /locus_tag="Acear_0311" /note="COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: dae:Dtox_0787 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: A5CZ90 glycosyltransferase; PFAM: Starch synthase catalytic domain; glycosyl transferases group 1" /codon_start=1 /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_003826925.1" /db_xref="GI:302391105" /db_xref="GeneID:9512313" /translation="MRVLMVSWEYPPVSIGGLASHVEELSQALVEEDVEVHLITQGGE VSDRYAEENGVYIYRVDKPDISTPDFLTWAMLVNYNFLEVANRLVNELDFDLIHIHDW LVGFTGKTLKHSYHLPLVVTIHATESGRNHGIYNSHQQYINDVEWLLGYESWRVICCS EYMREEIHGLFQTPKDKIDIINNGVNLDTFDVEVESGFKDKYTDGNLVFYIGRLVQEK GVQHLLEAVPQVLSTAPNTEFVIAGKGPKLDELKDQAHRMGIADHVTFPGYISEEEKE KLYQVADTAVFPSLYEPFGIVALEAMASKTPVVVSGVGGFDEIVDDGQDGLKALPGNP DSLAEKIIKLLTDHNYAESLRNNGYRKAVEEYSWQGIARQTKEVYNQVLTKYLDSDWR HVEPITTI" misc_feature 335223..336374 /locus_tag="Acear_0311" /note="Glycosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaG; COG0438" /db_xref="CDD:30787" misc_feature 335223..336359 /locus_tag="Acear_0311" /note="This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to...; Region: GT1_YqgM_like; cd03801" /db_xref="CDD:99974" gene 336447..338918 /locus_tag="Acear_0312" /db_xref="GeneID:9512314" CDS 336447..338918 /locus_tag="Acear_0312" /note="COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterProIPR016055:IPR011004:IPR005835:IPR001451:IPR 005844; KEGG: hor:Hore_15980 phosphoglucomutase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; SPTR: B8CYH8 phosphoglucomutase; PFAM: Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I" /codon_start=1 /transl_table=11 /product="nucleotidyl transferase" /protein_id="YP_003826926.1" /db_xref="GI:302391106" /db_xref="GeneID:9512314" /translation="MKAVIMAGGKGTRLRPLTCDSPKPMVPIMNKPVMEHIIDLLKRH GIKDIAVTTFYLPQVIEDYFGDGSDFGVNLHYFVEESPLGTAGSVKNAEEFLDETFIV ISGDALTDADLTKAVDYHQNKESVATLVLTQEDIPLEYGVVMTNQEGAITQFLEKPSW GEVFSDTVNTGIYILDPHVFNYYDKGVKFDFSKDLFPKLLQAGESMYGHVMKNYWCDV GNLQQYRKTHYDIINGKVEVNLPGEEIKDQVWVGEGTEIADTAELSGPLYIGKDCTIK AGVQLEESIIADNNIINDSTSIKKSIIWNNTFIDQNSELRGTVICDDVNIKDQVSIFE GAAIGDGTWVGKNAKIKPNVKVWPYKDISDFTILNKSLVWETEWNRTLFGNQGVVGIS NIEVTPDFVAKLGTAYGAMLENETVITISCDTYSISKLLKHSLASGLMSAGISVRDIG EMPSPVARYSVRRLKAEGGLHIRACQQEPQNTVIEFLNEDGINISRSEEKGIEKIFFR EDFQRADIEAVGEIDYIPQMIDSYIGGLIEGIDIDSIKEADYRVVADYEQDNLDDLWT ALTDRLNFKLLKTDYESGTSRPLSFQERLQKQDAILNKFDNEDEVDFGIILDHNGEEI TLITEEGELVGRELNEVIRAIINLRQGAKKIFVPVTAPRIIEEIALDYGADVTWTKAQ DKELLSNMLEYRKSNGEDFEGLPVVGDALSFLVKLMEFLAREETTLSELLSSIPEFHR VEETIECPWEAKGQVMRNLIEEVPEEQVELIDGIKVYHEDQESWTLVLPDSEEPTFHV YSEADTIQKANNFNEEYAEMISDLQ" misc_feature 336447..337550 /locus_tag="Acear_0312" /note="Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure...; Region: GCD1; COG1208" /db_xref="CDD:31401" misc_feature 336453..337103 /locus_tag="Acear_0312" /note="NTP_transferases catalyze the transfer of nucleotides onto phosphosugars; Region: NTP_transferase; cd04181" /db_xref="CDD:133024" misc_feature order(336462..336473,336513..336518,336681..336683, 336756..336758,336762..336767,336951..336953) /locus_tag="Acear_0312" /note="active site" /db_xref="CDD:133024" misc_feature order(336462..336470,336600..336602,336756..336758, 336762..336764) /locus_tag="Acear_0312" /note="Substrate binding site [chemical binding]; other site" /db_xref="CDD:133024" misc_feature order(336762..336764,337095..337097,337101..337103) /locus_tag="Acear_0312" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:133024" misc_feature 337197..337481 /locus_tag="Acear_0312" /note="Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes...; Region: LbetaH; cl00160" /db_xref="CDD:193687" misc_feature order(337230..337232,337239..337241,337248..337250, 337254..337256,337284..337286,337299..337301, 337356..337358,337386..337388,337398..337403, 337407..337409,337437..337439,337455..337457, 337461..337463,337467..337469) /locus_tag="Acear_0312" /note="putative trimer interface [polypeptide binding]; other site" /db_xref="CDD:100038" misc_feature order(337386..337388,337392..337397,337407..337409, 337443..337445,337467..337469) /locus_tag="Acear_0312" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:100038" misc_feature 337581..338912 /locus_tag="Acear_0312" /note="Phosphomannomutase [Carbohydrate transport and metabolism]; Region: {ManB}; COG1109" /db_xref="CDD:31306" misc_feature 337590..338903 /locus_tag="Acear_0312" /note="The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2)...; Region: phosphohexomutase; cl03757" /db_xref="CDD:194697" misc_feature order(337596..337598,337602..337604,337611..337613, 337869..337877,337899..337901,338298..338300, 338304..338306,338310..338315,338424..338426, 338487..338495,338535..338537,338541..338543, 338547..338549,338808..338810,338814..338822, 338835..338837) /locus_tag="Acear_0312" /note="active site" /db_xref="CDD:100086" misc_feature order(337602..337604,337869..337871,338313..338315, 338424..338426,338487..338489,338493..338495, 338535..338537,338541..338543,338547..338549, 338808..338810,338814..338822,338835..338837) /locus_tag="Acear_0312" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100086" misc_feature order(337869..337871,338298..338300,338304..338306, 338310..338312) /locus_tag="Acear_0312" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:100086" gene 339002..339916 /locus_tag="Acear_0313" /db_xref="GeneID:9512315" CDS 339002..339916 /locus_tag="Acear_0313" /note="InterPro IPR004700; KEGG: hor:Hore_15910 hypothetical protein; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; SPTR: B8CYH1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="phosphotransferase system PTS sorbose-specific IIC subunit" /protein_id="YP_003826927.1" /db_xref="GI:302391107" /db_xref="GeneID:9512315" /translation="MIKLFSLALLINSINFLERRLKCSSYRYLLHPILVAPLGGALLG NLSTGIYIGLLLEVIWGSNLFDYDFGLQYVNLAAILTTVLTLVTGNISLILNLTIAVI ITYLLQEAIIMLDSKTNQWIIEIGLFFFIFTLLNFTPVLKGLLGEIPAQFLDQLAVAS GLLPGLGLAVILAQIIVSEDLGSNLKLSYLLVLVILLLLSQWFNWLLPVLFIVIWGGG YLLVKKFKVSSYFLRLAIGGLVIAAAPLVVEITGPMVDSQLKLVLWSEAFLSVSTLGL LLFRITQFELYFICLILGVIASRAGLLL" gene 339930..340661 /locus_tag="Acear_0314" /db_xref="GeneID:9512316" CDS 339930..340661 /locus_tag="Acear_0314" /note="COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR016195:IPR003141:IPR004013; KEGG: tpd:Teth39_0577 hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: C7IP44 PHP domain protein; PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family" /codon_start=1 /transl_table=11 /product="PHP domain protein" /protein_id="YP_003826928.1" /db_xref="GI:302391108" /db_xref="GeneID:9512316" /translation="MEIIADLHTHTIACGHAYSTLEEMVRGAKEKGLELLATTDHGPC MPGGCHLYYFYNLAILPEVIDGIRVLKGVEANITDARGTLDLPVAVLKEMDIVLAGMH FLTGYNGGTKAENTEAMINAMKNSLVDVIVHPGNPEFEVNVEQVVETALENDVLLEIN NSSFRKSRTGSWDNCLDIAHTAKEAGLEVIVSSDAHFSRDVGRVQKALQLIEKAGLEE KDILNTSLERVTEFVKAKKEFKDRM" misc_feature 339930..340637 /locus_tag="Acear_0314" /note="putative hydrolase; Validated; Region: PRK09248" /db_xref="CDD:181726" misc_feature 339945..340166 /locus_tag="Acear_0314" /note="DNA polymerase alpha chain like domain; Region: POLIIIAc; smart00481" /db_xref="CDD:128757" gene 341401..341601 /locus_tag="Acear_0315" /db_xref="GeneID:9512317" CDS 341401..341601 /locus_tag="Acear_0315" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826929.1" /db_xref="GI:302391109" /db_xref="GeneID:9512317" /translation="MKRRITVLIIVLIILVSGCTAKEIPGEKDKPSREVPQPDEFNDP YGSEAQRKRLIHELDDLIRSDY" gene 341601..342344 /locus_tag="Acear_0316" /db_xref="GeneID:9512318" CDS 341601..342344 /locus_tag="Acear_0316" /note="COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR016195:IPR003141:IPR004013; KEGG: hor:Hore_15900 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: B8CYH0 PHP domain protein; PFAM: PHP domain" /codon_start=1 /transl_table=11 /product="PHP domain protein" /protein_id="YP_003826930.1" /db_xref="GI:302391110" /db_xref="GeneID:9512318" /translation="MYLTADYHTHTNYGHGAGRIKDNIRQAIQFDLDELAITEHGPAS HSLTRLGVKDSLQLLEIKEEIAEYNRYFDGLNLLAGVEANVINLEGRLDVPEVILNEL DIVLAGLHLWIKPDSWQAGRRIIFDNTIGYRLGLIPRGKVRQNNTQALVNAVKRYDID IITHPGYQLDINTYRLATVCRREDTCLEINNSHQQLSADFIDTAASTGVEFAVNSDAH TAGGVGRVDSALELINEAELDLDQVINVT" misc_feature 341601..342341 /locus_tag="Acear_0316" /note="putative hydrolase; Validated; Region: PRK09248" /db_xref="CDD:181726" misc_feature 341616..341861 /locus_tag="Acear_0316" /note="DNA polymerase alpha chain like domain; Region: POLIIIAc; smart00481" /db_xref="CDD:128757" gene 342407..343282 /locus_tag="Acear_0317" /db_xref="GeneID:9512319" CDS 342407..343282 /locus_tag="Acear_0317" /note="COGs: COG1660 P-loop-containing kinase; InterPro IPR005337; KEGG: hor:Hore_15880 uncharacterized P-loop ATPase protein UPF0042; PFAM: conserved hypothetical protein; SPTR: C0GFA8 Putative uncharacterized protein; PFAM: P-loop ATPase protein family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826931.1" /db_xref="GI:302391111" /db_xref="GeneID:9512319" /translation="MKKIKFVIITGMSGAGKTEAIRIFEDLGFFCVDNLPPVLISKFA ELCLQSDGKINKVALVIDIRGGDFFDNLLGELSKLDKEKFIDYEILFLEAGNDTLIQR YKETRRLHPLAKEEGRILDAIKLERKKLGALRGQADKVIDTSESSIKELKEELKSNFA RVELTDKINISLISFGFKYGMPADSDLMFDVRFLPNPHYVDSLRPLTGNDKQVQEYIL KRPITREFREKFFDLINFLIPQYIKEGKNHLSIGIGCTGGKHRSVTFVNELSDFLENK QYHVITEHRDIDKDR" misc_feature 342407..343279 /locus_tag="Acear_0317" /note="P-loop ATPase protein family; Region: ATP_bind_2; cl10035" /db_xref="CDD:186894" gene 343282..344637 /locus_tag="Acear_0318" /db_xref="GeneID:9512320" CDS 343282..344637 /locus_tag="Acear_0318" /note="COGs: COG0391 conserved hypothetical protein; InterPro IPR018181:IPR010119:IPR002882; KEGG: dhd:Dhaf_4721 protein of unknown function UPF0052 and CofD; PFAM: protein of unknown function UPF0052 and CofD; SPTR: A1HTY8 Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826932.1" /db_xref="GI:302391112" /db_xref="GeneID:9512320" /translation="MIKVKLFKWLYPGLKIKRWLILSIIGILMISIGLTVMLGFEFLG LLEGKLLTFIYSLTGRFSEWINIISGLVIMGLGIVFVTYGITKMINSIIEALLPENEE ELVELIYQQRHLKRGPEIVVIGGGTGLPTMLRGIKEFTSNITAVVTVADDGGSSGVLR DELNILPPGDIRNCLVALANTEELMERLFQYRFDTGEELGGHSFGNLFIATLSKVLGD FEKAVKKSSKVLAIKGQVLPSTLEDVVLSAETEEGSIIEGESNISKTDGNIKEVFLKP KDCSSLPEVIEAIEEADAVVLGPGSLYTSVIPNLLVSDLTEAIKESEALKIYNCNIMT QPGETTGYTVSDHVQALYDHAGSEIVDYVLVNNEQIPAELLAKYEEEGASPVEIDSRE LEKLNINLVEAPLLNKEDLVRHNSYKLAEVIIKLIIKFKEEADQSSLIDLYLRDKYRK R" misc_feature 343639..344556 /locus_tag="Acear_0318" /note="family of mostly uncharacterized proteins similar to B.subtilis YvcK; Region: YvcK_like; cd07187" /db_xref="CDD:132873" misc_feature 343639..344508 /locus_tag="Acear_0318" /note="Uncharacterised protein family UPF0052; Region: UPF0052; pfam01933" /db_xref="CDD:190165" misc_feature order(343654..343662,344179..344184,344194..344196, 344281..344286) /locus_tag="Acear_0318" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:132873" misc_feature order(343732..343734,343744..343746,343786..343788, 343795..343797,343897..343899) /locus_tag="Acear_0318" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:132873" misc_feature order(343876..343878,343891..343893,343900..343905, 343912..343917,343921..343926,343954..343956, 343963..343968) /locus_tag="Acear_0318" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132873" gene 344641..345600 /locus_tag="Acear_0319" /db_xref="GeneID:9512321" CDS 344641..345600 /locus_tag="Acear_0319" /note="COGs: COG1481 conserved hypothetical protein; InterPro IPR003802:IPR018478; KEGG: hor:Hore_15860 conserved hypothetical protein TIGR00647; PFAM: protein of unknown function DUF199; sporulation regulator WhiA-like; SPTR: B8CYG6 Putative sporulation transcription regulator whiA; PFAM: sporulation Regulator WhiA N terminal; sporulation Regulator WhiA C terminal domain; TIGRFAM: conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826933.1" /db_xref="GI:302391113" /db_xref="GeneID:9512321" /translation="MVMSFSDQVKNEAARIKVENKCCGWAQLAALIKVNGSLEIVRKR LALKMVSQHAAVARQTYQLLKERFNLLTKIMVRRNMYLNKDNYYIIKLPPQKGIKELL MNCGLIENDYRLNYRIKDSLVTNKCCKQAYLRGSFLGGGSVNNPESSYHLEIRVHKQD YAQQLAELAINSFGLDFGIRRKNSDSLLYLKNAEEIVKVLNIIGAHNSLLDFENTRVV KEVRNQVNRIVNCETANLNKTIEAAREQIGNIKLIEMIKGLDSLSPSLQEIAELRLEN PYASFKELGELLEPTLSKSGVNHRLRRINKLADRLRDERNLSS" misc_feature 344647..345588 /locus_tag="Acear_0319" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG1481" /db_xref="CDD:31670" misc_feature 344701..344964 /locus_tag="Acear_0319" /note="Sporulation Regulator WhiA N terminal; Region: WhiA_N; pfam10298" /db_xref="CDD:150898" gene 345619..347010 /locus_tag="Acear_0320" /db_xref="GeneID:9512322" CDS 345619..347010 /locus_tag="Acear_0320" /note="COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: dae:Dtox_3938 RNA polymerase, sigma 54 subunit, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; SPTR: A5CYP0 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 54 subunit, RpoN" /protein_id="YP_003826934.1" /db_xref="GI:302391114" /db_xref="GeneID:9512322" /translation="MKLTPEISLEQKQELIMTPKLQQAIELLQLSKLELNQRLEQEML ENPVLERAEEEGEEVEEDLTDEFEDVDWEDYFVDSSSNYKVNNYDQDEDEYNYENFVS ASLTLEEHLLHQLHLLQLSSQQIKIGEYIIGSLDNNGFLDTSITQLSKELKVEESGVE EVLAKIQQFDPTGVAAKDLQDSLLIQIDNLVLEAEKKELMNKIVTDHFELVSKNQLRK LSKELSIGLEKIQQLVDLIKMLHPNPANLYTKEVDTKYIEPDLIVEKINGRYVVTMEQ DSTPRLRINAYYQKLLKKFKSDAKAKEYLQEKINSALWLIKSIEQRRMTIYRIAEVIV DLQQEFLERGLKYLRPMTMQDVAEEIDMHESTVSRATTSKYIQTPRGLFELKFFFSPG LETKTGEVFSAISIKKMIKDILAKEDKKKPLSDQKIADKLEERGVEVSRRTVSKYRNE LEIPSSTQRRRYS" misc_feature 345625..347004 /locus_tag="Acear_0320" /note="RNA polymerase factor sigma-54; Reviewed; Region: PRK05932" /db_xref="CDD:180314" misc_feature 345631..345765 /locus_tag="Acear_0320" /note="Sigma-54 factor, Activator interacting domain (AID); Region: Sigma54_AID; pfam00309" /db_xref="CDD:189497" misc_feature 345889..346482 /locus_tag="Acear_0320" /note="Sigma-54 factor, core binding domain; Region: Sigma54_CBD; pfam04963" /db_xref="CDD:147239" misc_feature 346522..347001 /locus_tag="Acear_0320" /note="Sigma-54, DNA binding domain; Region: Sigma54_DBD; pfam04552" /db_xref="CDD:113327" gene 347548..348576 /locus_tag="Acear_0321" /db_xref="GeneID:9512323" CDS 347548..348576 /locus_tag="Acear_0321" /note="COGs: COG2390 transcriptional regulator contains sigma factor-related N-terminal domain; InterPro IPR007324; KEGG: hor:Hore_15840 transcriptional regulator, DeoR family; PFAM: sugar-binding domain protein; SPTR: B8CYG4 transcriptional regulator, DeoR family; PFAM: Putative sugar-binding domain" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="YP_003826935.1" /db_xref="GI:302391115" /db_xref="GeneID:9512323" /translation="MKELIRLQQKIAPGLIKVVERRYNILRTIFYSQPIGRRRLAEKI GVSERKVRNDLDFLKERYLVNSTSAGTKITETGKELFYQLDNYIRVLRGLDNLESKLK HELGLKEVYIVPGSEDEAKAQQELGRRAARLLKEKLENNDVLAVNGGTTLAAVADFML ANNGATDITVVPARGGLGEEVEIQANTIAAQIANKLGGRYRLLHLPDNLDQTVVNTLI QKPQIKEVLNLAKEADILIHGIGTAEVMARRRQVDSLELEKILEAGAVGEAFGYYFNQ TGEIVYSTTSLGVQLEDLKKKVGKTIAVAGGKKKAGAIISVVSDEYQDMLITDREAAE EILDLLRG" misc_feature 347572..348567 /locus_tag="Acear_0321" /note="Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]; Region: DeoR; COG2390" /db_xref="CDD:32535" misc_feature 347824..348561 /locus_tag="Acear_0321" /note="Putative sugar-binding domain; Region: Sugar-bind; pfam04198" /db_xref="CDD:146700" gene 348652..349650 /locus_tag="Acear_0322" /db_xref="GeneID:9512324" CDS 348652..349650 /locus_tag="Acear_0322" /EC_number="1.2.1.12" /note="COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR020830:IPR020832:IPR016040:IPR006424:IPR 020831:IPR020828:IPR020829; KEGG: sru:SRU_1200 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Q2S3A6 Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="YP_003826936.1" /db_xref="GI:302391116" /db_xref="GeneID:9512324" /translation="MTKKIAINGFGRIGRNIFRIIQQREDVDLEIVAINDLTDADNLA YLLKYDSVHGRYDGEVEVGENGIKVDGKDYEVTSESDPANLDWSGKDIDIVIEATGVF RRREQLEKHLKAGADKVVLTVPAKDKIDSTIVLGVNDDDLDESDQIVSNASCTTNCLA PMAKVLNDEFGIEKGLITTVHGYTASQSILDAPAKKTRRGRTAAENIIPTTTGAAIAT TKVLPELEGKINGMAMRVPVPDGSVVDGVFDLETDVTVKEVNEAFKKAAEGEMEGILG YTEDELVSRDIIGSPYSSLIDAQSTMMIANNQIKVLSWYDNEWGYSNRVIELADRL" misc_feature 348724..349629 /locus_tag="Acear_0322" /note="glyceraldehyde-3-phosphate dehydrogenase, type I; Region: GAPDH-I; TIGR01534" /db_xref="CDD:188153" misc_feature 348733..349113 /locus_tag="Acear_0322" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 349126..349596 /locus_tag="Acear_0322" /note="Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Region: Gp_dh_C; pfam02800" /db_xref="CDD:145777" gene 349727..350911 /locus_tag="Acear_0323" /db_xref="GeneID:9512325" CDS 349727..350911 /locus_tag="Acear_0323" /EC_number="2.7.2.3" /note="COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR015824:IPR015901:IPR001576; KEGG: hor:Hore_15820 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: phosphoglycerate kinase; SPTR: B8CYG2 phosphoglycerate kinase; PFAM: phosphoglycerate kinase" /codon_start=1 /transl_table=11 /product="phosphoglycerate kinase" /protein_id="YP_003826937.1" /db_xref="GI:302391117" /db_xref="GeneID:9512325" /translation="MEKKTLKDVDVEDKQVLVRVDFNVPMENGEVTDDNRIRAALPTI EYLMEAEAKVILMAHLGRPGGEVKEELRLDPVAKELANLLNEEVVKVDETVGQEAKKA VSQLESGEALLLENTRFNPGEKKNDSEFAQKLSELADVYVNDAFGATHRAHASTAGVA EYVEEAVPGFLIQNEIKTMKGAIDNPERPFVAIIGGAKVSDKIEVIKSLLDKVDSLLI GGGMANTFIAAQDYEIGDSLVEEDKIDLAKELLELAEEKGVNLVLPEDVVIADDFAAD AEHKAVGIDEIEAGWQALDIGPETVDEFSQIVKQAKTIVWNGPMGVFEMDAFAKGTNQ LAEVLAKLEATTIIGGGDSAAAVRKAGLDKEMTHISTGGGASLQLWQGKPLPAVEVLD NK" misc_feature 349742..350905 /locus_tag="Acear_0323" /note="Phosphoglycerate kinase (PGK) is a monomeric enzyme which catalyzes the transfer of the high-energy phosphate group of 1,3-bisphosphoglycerate to ADP, forming ATP and 3-phosphoglycerate. This reaction represents the first of the two substrate-level...; Region: Phosphoglycerate_kinase; cd00318" /db_xref="CDD:29400" misc_feature order(349787..349789,349793..349795,349832..349834, 349901..349903,350078..350080) /locus_tag="Acear_0323" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:29400" misc_feature order(350273..350284,350831..350839) /locus_tag="Acear_0323" /note="hinge regions; other site" /db_xref="CDD:29400" misc_feature order(350387..350389,350603..350605,350675..350677, 350681..350683,350687..350698,350777..350785) /locus_tag="Acear_0323" /note="ADP binding site [chemical binding]; other site" /db_xref="CDD:29400" misc_feature 350780..350782 /locus_tag="Acear_0323" /note="catalytic site [active]" /db_xref="CDD:29400" gene 350939..351688 /locus_tag="Acear_0324" /db_xref="GeneID:9512326" CDS 350939..351688 /locus_tag="Acear_0324" /EC_number="5.3.1.1" /note="COGs: COG0149 Triosephosphate isomerase; InterPro IPR013785:IPR020861:IPR000652; KEGG: hor:Hore_15810 triose-phosphate isomerase; PFAM: triosephosphate isomerase; SPTR: B8CYG1 Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase" /codon_start=1 /transl_table=11 /product="triosephosphate isomerase" /protein_id="YP_003826938.1" /db_xref="GI:302391118" /db_xref="GeneID:9512326" /translation="MRQPFIAGNWKMHKTNQEAVEMVEELVDLVGDIGDVDIAICAPA TALAPLSEVTAGTNIALGAEDMHWEEEGAYTGEISPLMLKDVGCEYVILGHSERRDYF GETDEDVNKKVQTALKHSLKPIICVGESLAQREAEGTKDVVKNQVLAALDGVNIDDLK VITIAYEPLWAIGTGKSASTKEANEVIKYIRNVLRNEFGKVADSMRIQYGGSVKPHNI SEFMATSDIDGALVGSASLEAQSFADIVKFE" misc_feature 350948..351679 /locus_tag="Acear_0324" /note="Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually...; Region: TIM; cd00311" /db_xref="CDD:73362" misc_feature order(350963..350965,350969..350971,351221..351223, 351437..351439,351455..351457,351572..351574, 351629..351631,351635..351640) /locus_tag="Acear_0324" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73362" misc_feature order(350963..350965,350972..350974,351068..351076, 351080..351082,351089..351091,351128..351130, 351182..351184,351191..351196,351227..351232) /locus_tag="Acear_0324" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73362" misc_feature order(350969..350971,351221..351223,351437..351439) /locus_tag="Acear_0324" /note="catalytic triad [active]" /db_xref="CDD:73362" gene 351706..353262 /locus_tag="Acear_0325" /db_xref="GeneID:9512327" CDS 351706..353262 /locus_tag="Acear_0325" /EC_number="5.4.2.1" /note="COGs: COG0696 phosphoglyceromutase; InterProIPR017849:IPR011258:IPR017850:IPR005995:IPR 006124; KEGG: hor:Hore_15800 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; SPTR: B8CYG0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase" /codon_start=1 /transl_table=11 /product="phosphoglycerate mutase" /protein_id="YP_003826939.1" /db_xref="GI:302391119" /db_xref="GeneID:9512327" /translation="MVKPPKPLALVILDGWGLSEKEEGNAIRQACTPNFDQLWNNYPH TTLAASGKEVGLPKGQMGNSEVGHLNLGAGRIVYQDLTRISLGIKEGSFFENEVLLEA VENCKENNSALHLMGLLSDGGVHSHIEHLYGLLRLAKRNDIKEVYIHAILDGRDVSPA SGKQYLEELEDKLAELEVGKIATVSGRYYTMDRDERWDRTEKAYNALAFGEGVTASNA LEAVEQSYKEDTTDEFVEPTVIIDKGEPVAKINDNDSVIFYNFRPDRARQITRAFTDI DFHGFDRNPEAPEVHFVCMTEYDETIDAPIAYPHREVVDTFGEILARNGLKQLRIAET EKYAHVTFFFNGGKEKPNSGEDRKLIPSPKIDTYDEKPEMSIYKVTEELFNQLEETDY DVIILNLANPDMVGHTGDLDACCEAIEAVDDCLRRVVDKILELGGEALITADHGNAEK MIEPTTGEFHTAHTVDPVPFIYVTEENQDVELIEHGKLADVAPTMLELLELEEPEEMT GNLLFQKGGV" misc_feature 351712..353181 /locus_tag="Acear_0325" /note="Phosphoglyceromutase [Carbohydrate transport and metabolism]; Region: GpmI; COG0696" /db_xref="CDD:31040" misc_feature 351715..353181 /locus_tag="Acear_0325" /note="Sulfatase; Region: Sulfatase; cl10460" /db_xref="CDD:195965" gene 353265..354551 /locus_tag="Acear_0326" /db_xref="GeneID:9512328" CDS 353265..354551 /locus_tag="Acear_0326" /EC_number="4.2.1.11" /note="COGs: COG0148 Enolase; InterPro IPR020809:IPR000941:IPR020811:IPR020810; KEGG: hor:Hore_15790 enolase; PFAM: Enolase-like; PRIAM: phosphopyruvate hydratase; SPTR: B8CYF9 Enolase; TIGRFAM: enolase; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase" /codon_start=1 /transl_table=11 /product="enolase" /protein_id="YP_003826940.1" /db_xref="GI:302391120" /db_xref="GeneID:9512328" /translation="MFYTAIEDLYAREILDSRGNPTVEVEVILSSGAVGRAAVPSGAS TGAYEAVELRDEDADRYLGKGVKQAVNNVNEVIAPELIGMDAARQVEIDQRMIELDGT KNKGDLGANAILGVSMAAAKAAANALNLPLYNYIGGVNAKSLPVPMMNILNGGEHADN NVDIQEFMVMPVGAVNFSSALQMGAEVFHNLKKVLQQKDLNTAVGDEGGFAPDLDSNE EALEIIIEAVESAGYTPGADIKLALDVAATEIYEDDKYILAGEGVEKTAEEMVEFYLE LTEKYPIISIEDGLAEDDWSGWQQMTDRLGDEIQIVGDDLYVTSTERLSKGIKMEASN SILIKVNQIGTITETLEAIEMAKRAGFTAVVSHRSGETEDVTISDLVVAANAGQIKTG APSRTDRVAKYNQLLRIEEELGATGLYSGSDAFYNL" misc_feature 353271..354548 /locus_tag="Acear_0326" /note="enolase; Provisional; Region: eno; PRK00077" /db_xref="CDD:178845" misc_feature 353286..354500 /locus_tag="Acear_0326" /note="Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions; Region: enolase; cd03313" /db_xref="CDD:48188" misc_feature order(353292..353294,353298..353324,353334..353336, 353370..353372,353736..353744,353805..353810, 353817..353822,353829..353834,353871..353876, 353895..353897,353901..353903,354375..354383, 354450..354458,354462..354467,354474..354476, 354483..354488,354495..354497) /locus_tag="Acear_0326" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48188" misc_feature order(353394..353396,353994..353996,354123..354125, 354204..354206) /locus_tag="Acear_0326" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:48188" misc_feature order(353733..353735,353883..353885,354279..354281, 354363..354371,354432..354434) /locus_tag="Acear_0326" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:48188" gene 354619..354918 /locus_tag="Acear_0327" /db_xref="GeneID:9512329" CDS 354619..354918 /locus_tag="Acear_0327" /note="InterPro IPR004692; KEGG: hor:Hore_15770 preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; SPTR: B8CYF7 Preprotein translocase, SecG subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit" /codon_start=1 /transl_table=11 /product="protein translocase subunit secG" /protein_id="YP_003826941.1" /db_xref="GI:302391121" /db_xref="GeneID:9512329" /translation="MEFLLFFLWDYVKIDNGNLIEKKEVKNVFVLKVIHLIISLALIA GVLLQSGKSAGLSGAIDGGASSFFDQGRQAEEKIKKLTTVAAILFMISSLVLAAL" misc_feature 354706..354915 /locus_tag="Acear_0327" /note="Preprotein translocase SecG subunit; Region: SecG; cl09123" /db_xref="CDD:195798" gene 354988..356958 /locus_tag="Acear_0328" /db_xref="GeneID:9512330" CDS 354988..356958 /locus_tag="Acear_0328" /EC_number="3.6.1.1" /note="COGs: COG3808 Inorganic pyrophosphatase; InterPro IPR004131; KEGG: hor:Hore_15760 V-type H(+)-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: B8CYF6 V-type H(+)-translocating pyrophosphatase; TIGRFAM: V-type H(+)-translocating pyrophosphatase; PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase" /codon_start=1 /transl_table=11 /product="V-type H(+)-translocating pyrophosphatase" /protein_id="YP_003826942.1" /db_xref="GI:302391122" /db_xref="GeneID:9512330" /translation="METYMIPLAGVIALIFAFMLRTKISKEDMGTEKMEELTKAINEG AMAFLSTEYKNLSIFVIIVAIIISIFLNIYTAVAFITGAIFSALAGYFGMQIATISNS RTTNAARSGMNKALQISFSGGAVMGMSVVGLGLLGLGGLYILFDGNVEYIRGFAFGAS SIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPGAIADNVGDNVGDVAGMGA DLFESYVGSIVAAMALGVSLADKNPAIGVNFVLLPMFIAAAGIVAAIIGTRFVRAKEG SNLGAALERGTLVSAGLNLIFAYLLTNTLLGQTGYFWAILAGLIAGVLIGRITEYYTS DHKPPVQHIADQSQTGVATNIISGLAVGMRSTTLPIIVIAITIFIAFKLGGLYGIALA AVGMLSTTGITLAVDAYGPIADNAGGIAEMAELDPKVREITDQLDAAGNTTAAIGKGF AIGSAALTSLALFSAFTEAADLQNIVLTNPNVIIGLFIGAMLPFLFSAITMEAVGTAA FEMIEEIRRQFKEIPGIMEGENRPDYARCVDISTAAALREMILPGALAVITPILVGLW SAEALGGLLAGALSAAVLMAIMMSNAGGAWDNAKKYVEAGNFGGKGTDTHDATVVGDT VGDPFKDTSGPSLNILIKLMTIVSLVFAPLFG" misc_feature 354997..356952 /locus_tag="Acear_0328" /note="Inorganic pyrophosphatase [Energy production and conversion]; Region: OVP1; cl11452" /db_xref="CDD:187048" misc_feature 355015..356943 /locus_tag="Acear_0328" /note="Inorganic H+ pyrophosphatase; Region: H_PPase; pfam03030" /db_xref="CDD:190506" gene 357420..359255 /locus_tag="Acear_0329" /db_xref="GeneID:9512331" CDS 357420..359255 /locus_tag="Acear_0329" /note="COGs: COG3894 Uncharacterized metal-binding protein; InterPro IPR012675:IPR001041; KEGG: dhd:Dhaf_3310 ferredoxin; PFAM: ferredoxin; SPTR: C6PA24 vitamin B12 dependent methionine synthase activation region; PFAM: 2Fe-2S iron-sulfur cluster binding domain" /codon_start=1 /transl_table=11 /product="ferredoxin" /protein_id="YP_003826943.1" /db_xref="GI:302391123" /db_xref="GeneID:9512331" /translation="MPKVKIISGAEELALDAEEGRNLLSLLQENNLEVDAVCGGQGRC GKCKVRVKGAASELTIKERDLLSQLERERGVRLACEVEVEGTIEVGLLSEGDDETLRI LDEGVAEELTPQASIEKDYLELKEPTLEDQASDWTRIIRELDRELEINLDLLQQLPDI LREAGYNITVVRAGNQVLQIEPGDTTDSLYGLAFDIGTTTVVGFLLDLNTGKQIGKVA MANAQKTYGADALSRVNYTVEEDGGTLDLQEKIIGTINQIIGRIIDKYGVNRDRIYEL VFVGNTIMNHLLLGLKTEYLAKAPYIAVINEPQSIPAHKLGIELLDDTVITYLPNVAS YVGSDIVSGLLTTNLNQTADYKLLVDLGTNSELVLGNSDQMLACAAAAGPAFEGAEIE FGMNGIDGAIEEVRITDQLEIDIIGDKPAKGICGSGIISLVAELKSTGMMDESGKLLS KEELPESVPEEVKEGLIEDDTNKKLILVDEAEAADQPVTISQKDIRAIQLAKGAIRAG IKILLKEMELEISDIDEVLIAGGFGNYIQPKDAVTIGVLPTAPDLEIHGIGNAAGSGA KAALLNCGQRDEAEEIAKEVNYLELSGRQDFQTEFMDSMAFKEFE" misc_feature 357519..359240 /locus_tag="Acear_0329" /note="Uncharacterized metal-binding protein [General function prediction only]; Region: COG3894" /db_xref="CDD:33682" misc_feature <357519..357686 /locus_tag="Acear_0329" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cl00159" /db_xref="CDD:193686" gene 359334..359729 /locus_tag="Acear_0330" /db_xref="GeneID:9512332" CDS 359334..359729 /locus_tag="Acear_0330" /note="InterPro IPR006683; KEGG: hor:Hore_15750 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: B8CYF5 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1" /codon_start=1 /transl_table=11 /product="thioesterase superfamily protein" /protein_id="YP_003826944.1" /db_xref="GI:302391124" /db_xref="GeneID:9512332" /translation="MEIEDSEMCFACGKDNPIGLKLDFELNDDVVETTFTPRNVHQGF TGIVHGGLLSTLLDEAMANLLYLQDLKAVTAKMEVKFRQPVSIGEDLTITGWIEREKK RTINTVAKILNQDQQKVAEAEAVFIKQNE" misc_feature 359406..359714 /locus_tag="Acear_0330" /note="PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not...; Region: PaaI_thioesterase; cd03443" /db_xref="CDD:48038" misc_feature order(359475..359477,359553..359555,359574..359585) /locus_tag="Acear_0330" /note="CoenzymeA binding site [chemical binding]; other site" /db_xref="CDD:48038" misc_feature order(359478..359480,359484..359486,359493..359495, 359556..359570,359574..359576) /locus_tag="Acear_0330" /note="subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:48038" misc_feature order(359481..359483,359505..359510,359553..359555) /locus_tag="Acear_0330" /note="PHB binding site; other site" /db_xref="CDD:48038" gene 359748..360299 /locus_tag="Acear_0331" /db_xref="GeneID:9512333" CDS 359748..360299 /locus_tag="Acear_0331" /note="COGs: COG2316 hydrolase (HD superfamily); InterPro IPR003607:IPR006675:IPR006674; KEGG: hor:Hore_15740 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: B8CYF4 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG" /codon_start=1 /transl_table=11 /product="metal dependent phosphohydrolase" /protein_id="YP_003826945.1" /db_xref="GI:302391125" /db_xref="GeneID:9512333" /translation="MEWSEALAELKDNLTNENLVKHCIAVEAGMEELAEYFDKDLKKW GLAGLLHDIDYDETKDDPEQHSLLGAEMLEDLGLDEDIVYAVKVHNEVHDLPRRSKLD KALYAVDPLTGLIVAATLIHPDKELDAVDVEFVMNRFEESSFAKGADRDQIKSCSELG LGLEEFIDLVLAGMQSKSDELGL" misc_feature 359760..360296 /locus_tag="Acear_0331" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" gene 360385..362505 /locus_tag="Acear_0332" /db_xref="GeneID:9512334" CDS 360385..362505 /locus_tag="Acear_0332" /EC_number="3.1.-.-" /EC_number="3.1.13.1" /note="COGs: COG0557 Exoribonuclease R; InterProIPR012340:IPR001900:IPR003029:IPR016027:IPR 011129:IPR011805:IPR004476:IPR013223; KEGG: hor:Hore_15730 ribonuclease R; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; PRIAM: Exoribonuclease II; SMART: Cold shock protein; SPTR: B8CYF3 Ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: RNB domain; Ribonuclease B OB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases" /codon_start=1 /transl_table=11 /product="RNAse R" /protein_id="YP_003826946.1" /db_xref="GI:302391126" /db_xref="GeneID:9512334" /translation="MSAREEILNFMRNEAYKPLTAEELLSAFEISDQEKGIFLDLLDQ MEQDGEIVQTRRNRYGIPERMNLVVGRLERHSKGFGFLLPDDVEKEDVYINAGDVNGA MHNDRIIARIKGVKSGDKLSGEVIRILERANQTVVGDFEANRNFGFVVPDDSHIYHDI FIPKHDTNGASQGQKVVVEITRWPEERRNPEGKVVEILGNRGEPGVDIEAIIRKFELP KEFPEEVKRYVDEIPEEIPAEEIERRSDLRDIKMVTIDGEDAKDFDDAVSIERLEGNK VRLGVHIADVAYYVPEDSILDMEARERATSIYLVDRVIPMLPEKLSNNLCSLRDDEDK LAMTVFMTYDLKTGELLDHEFMESVIEINHRLTYDKVKEMLVNEDQELINEYEDFIDE LRLMEELCLQIRENRFNEGSLDFDFPESRVILDDDGKPVDIARVERSIAEKLIEEFMI ATNRVVAKEMFWREVPFIYRVHETPDQSDLEGLNEFIHNFGYHIKGISQETHPKSLQT VLEKVKGEQEERIVNTVLLRSMKQAHYEVQNIGHFGLAIDYYSHFTSPIRRYPDLMIH RIIKDVINQGILDPNRHQALEEKLPELAEHSSLRERQAEEAEYESKDLKKVEYMEGEE GEVYEGIISGMMSFGFFVELPNLIEGLVHVSNLTDDYYIYHEDKQVYIGERTGNIYRL GDSVEVEVYQVNLAERQIDLLLRN" misc_feature 360385..362496 /locus_tag="Acear_0332" /note="ribonuclease R; Region: RNase_R; TIGR02063" /db_xref="CDD:188196" misc_feature 360592..360768 /locus_tag="Acear_0332" /note="S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain...; Region: S1_like; cl09927" /db_xref="CDD:195927" misc_feature 360796..360975 /locus_tag="Acear_0332" /note="S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain...; Region: S1_like; cl09927" /db_xref="CDD:195927" misc_feature 361114..362103 /locus_tag="Acear_0332" /note="RNB domain; Region: RNB; pfam00773" /db_xref="CDD:189712" misc_feature 362275..362496 /locus_tag="Acear_0332" /note="S1_RNase_R: RNase R C-terminal S1 domain. RNase R is a processive 3' to 5' exoribonuclease, which is a homolog of RNase II. RNase R degrades RNA with secondary structure having a 3' overhang of at least 7 nucleotides. RNase R and PNPase play an...; Region: S1_RNase_R; cd04471" /db_xref="CDD:88436" misc_feature order(362281..362283,362305..362307,362335..362337, 362341..362343) /locus_tag="Acear_0332" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88436" gene 362605..363078 /locus_tag="Acear_0333" /db_xref="GeneID:9512335" CDS 362605..363078 /locus_tag="Acear_0333" /note="COGs: COG0691 tmRNA-binding protein; InterPro IPR000037:IPR020081; KEGG: hor:Hore_15720 SsrA-binding protein; PFAM: SmpB protein; SPTR: C3J5Q1 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein" /codon_start=1 /transl_table=11 /product="SsrA-binding protein" /protein_id="YP_003826947.1" /db_xref="GI:302391127" /db_xref="GeneID:9512335" /translation="MSEEGIKVIARNRKAKHEYHIEETYEAGIVLQGTEVKSIRQGRA NLKDSFAIVEDEEVFLYHLHIAPYKQGNRYNHKPERVRKLLLHKRQIRSLIGKTREQG YTLIPLKLYFRRGIVKVELALAEGKNVHDKREDIKRRTAQRDIERAFKDKQLNRY" misc_feature 362638..362985 /locus_tag="Acear_0333" /note="Small protein B (SmpB) is a component of the trans-translation system in prokaryotes for releasing stalled ribosome from damaged messenger RNAs; Region: SmpB; cd09294" /db_xref="CDD:187755" misc_feature order(362680..362697,362701..362706,362710..362715, 362722..362724,362773..362775,362857..362874, 362956..362958) /locus_tag="Acear_0333" /note="SmpB-tmRNA interface; other site" /db_xref="CDD:187755" gene 363545..363621 /locus_tag="Acear_R0030" /db_xref="GeneID:9512336" tRNA 363545..363621 /locus_tag="Acear_R0030" /product="tRNA-Trp" /db_xref="GeneID:9512336" gene complement(363763..363870) /locus_tag="Acear_0334" /pseudo /db_xref="GeneID:9512337" gene complement(363967..365793) /locus_tag="Acear_0335" /db_xref="GeneID:9512338" CDS complement(363967..365793) /locus_tag="Acear_0335" /note="COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594:IPR004358:IPR005467:IPR009082:IPR 003661; KEGG: cbe:Cbei_2435 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A6LW63 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain" /codon_start=1 /transl_table=11 /product="integral membrane sensor signal transduction histidine kinase" /protein_id="YP_003826948.1" /db_xref="GI:302391128" /db_xref="GeneID:9512338" /translation="MGINFNKSLKNSITLKIGVAIVVLLAVIFTLVVIDFRQAQTHEI NKEMKKIILDVSHQINAQNQRTIDLVETLAYYQEIGNFGERKESLHYLYKFLNNHSDF AGVYFGYEPNADGQDSKYAGTSGKDHNSNGQFLPYVHWSESEIKIEPLVNVSINEYYQ APKKTGKTVITEPHNYEGEMITETTHPIEINGEFMGIAGIDRRLTKFRKMLKGLKPFE TARFYLLSKENRVIGTSDENKLLAKYLNQIDKYEEAFMPLVGSNQVKVVHNKQLDKVI AYAPIEIADWKVLMTVDQSEIMSAVNETTSKMVILGIIGVFIICGLLYWLIDRYELLK EKLEYNRLQVQFFANLSHELKTPLNLIFSTLQLLDLYQKNNFESKTYQKLSEYTGTIK QNSYRLLRLVNNLVDITKINSNSFNLNLKNDNIVKIVREITYSVNNYIENEDRILEFN SNIEKKIIACDPFSIERIILNLLSNAIKFTEPGDKISVNVSETDEQEMILISVKDTGI GIPNKKQNIIFERFGQVDKSFTRNNEGSGIGLAIVKLLVELHNGEITVNSTYGEFTEF NIKLPIRRLQEQEESELSQKANMNHGINRIEIEFSDIYNLQE" misc_feature complement(364075..>365142) /locus_tag="Acear_0335" /note="Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]; Region: KdpD; COG2205" /db_xref="CDD:32387" misc_feature complement(364564..364776) /locus_tag="Acear_0335" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature complement(order(364579..364581,364591..364593, 364600..364602,364612..364614,364621..364623, 364633..364635,364702..364704,364711..364713, 364723..364725,364732..364734,364744..364746, 364756..364758)) /locus_tag="Acear_0335" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature complement(364738..364740) /locus_tag="Acear_0335" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature complement(364084..364401) /locus_tag="Acear_0335" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(364096..364098,364102..364107, 364120..364122,364126..364128,364174..364185, 364264..364269,364273..364275,364279..364281, 364285..364287,364360..364362,364369..364371, 364381..364383)) /locus_tag="Acear_0335" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(364369..364371) /locus_tag="Acear_0335" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(364177..364179,364183..364185, 364267..364269,364273..364275)) /locus_tag="Acear_0335" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene 365956..366573 /locus_tag="Acear_0336" /pseudo /db_xref="GeneID:9512339" gene complement(366644..366731) /locus_tag="Acear_R0031" /db_xref="GeneID:9512340" tRNA complement(366644..366731) /locus_tag="Acear_R0031" /product="tRNA-Leu" /db_xref="GeneID:9512340" gene complement(367088..368383) /locus_tag="Acear_0337" /db_xref="GeneID:9512341" CDS complement(367088..368383) /locus_tag="Acear_0337" /note="InterPro IPR001119; KEGG: hor:Hore_03370 S-layer domain protein; PFAM: S-layer domain protein; SPTR: B8D1M1 S-layer domain protein; PFAM: S-layer homology domain" /codon_start=1 /transl_table=11 /product="S-layer domain protein" /protein_id="YP_003826949.1" /db_xref="GI:302391129" /db_xref="GeneID:9512341" /translation="MQKKIISIILSAILIVAVSLPIMANNYATDIEGHWANTHITELL ADNILSTYYDGQFKPQQPITRGEFAVGLAKGLDLDVVSVTNLTDIQSHPAKGYIAALV HQEIITGYPDNTFRPERQISRAELVTMLMRALELNKTETEINLKGINYDDIPAEDYWA NNFINLASRLEIIDGYPDGSFRPNNKVTRAEAAKMLNQTLKLRVIDGSLKAAYPLSNK IRVQKQDGSEIIIDVANNALVGRNNRLVDLDSLMTDDSLHLIVNEFNKIKYLKAYGMV TTDDIATEVSDLTGGIFNPDEVKDLSQGDLKVIESKAKEQVSEITNGFVTPNDLDLIA NGKYGLLKPKMRLGIEMELINQGLTYEEAKAILDTDWNALEDFGKTRLVEAVAIQAGL PVDVTDALLEQNWTRLRRLAEIELIQRATAEVLTSDLLS" misc_feature complement(368177..368299) /locus_tag="Acear_0337" /note="S-layer homology domain; Region: SLH; pfam00395" /db_xref="CDD:189531" misc_feature complement(368003..368131) /locus_tag="Acear_0337" /note="S-layer homology domain; Region: SLH; pfam00395" /db_xref="CDD:189531" misc_feature complement(367805..367939) /locus_tag="Acear_0337" /note="S-layer homology domain; Region: SLH; pfam00395" /db_xref="CDD:189531" gene 368603..369085 /locus_tag="Acear_0338" /db_xref="GeneID:9512342" CDS 368603..369085 /locus_tag="Acear_0338" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826950.1" /db_xref="GI:302391130" /db_xref="GeneID:9512342" /translation="MKRLIILFLIIGMLSFMVFDSGVNFPAKLETVGINWTIIAEDVS QVAMMVKQSTASLINIMFGKDKEVEEDIARYDAGEMHLEGEIKKISDNPRAIHIKLHM SDINDKVDNPIEIASRAVFKIKEDKATFRSLQIGDIVGIIINPQGKARKITVYNRPQQ " gene 369401..370657 /locus_tag="Acear_0339" /db_xref="GeneID:9512343" CDS 369401..370657 /locus_tag="Acear_0339" /note="InterPro IPR003615:IPR002711; KEGG: fma:FMG_P0170 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: B0S4M8 Putative uncharacterized protein; PFAM: HNH endonuclease" /codon_start=1 /transl_table=11 /product="HNH endonuclease" /protein_id="YP_003826951.1" /db_xref="GI:302391131" /db_xref="GeneID:9512343" /translation="MAINYAFVLDNEGKMLDPTKAKKAWYLIRQGKAELVEEYPLIIQ LNRTVPSSQINDDEIVLGIDDGAKYVGVALVQDCKTKNKVLFKAKMKQRQDVSAKMEE RNDYRGYRRSHKRYRPKRFDNRFASKRKGRLPPSIKQRKQAILRVVKHLSKHIRLDKI ILEDVSIDIRKLTEGEELYSWQYQESNRLDENLRKATLKRDDYTCQLCEVEDTMLHAH HIIPVRDGGADSIYNLITLCADCHNNKVDNNEYKYKDQLLTKIDGKELNLKPAMHVMQ GKSWLREELSTMAKLEITTGGDTANRRIDYNIEKTHSNDAICITGLLPIDRLDIKGYF IKPLRKKRASKIDSLGDFKHRDVIRYIKRDGTTYLGYITALRVKNNKYNSKVCNFTTL DGEKTFRGYGLTNLTLVNRPQGLMII" misc_feature 369971..370135 /locus_tag="Acear_0339" /note="HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins...; Region: HNHc; cd00085" /db_xref="CDD:28969" misc_feature order(370046..370048,370052..370060,370064..370066, 370097..370102,370112..370117,370124..370126) /locus_tag="Acear_0339" /note="active site" /db_xref="CDD:28969" gene 370730..373348 /locus_tag="Acear_0340" /db_xref="GeneID:9512344" CDS 370730..373348 /locus_tag="Acear_0340" /EC_number="2.7.7.7" /note="COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR019760:IPR002298:IPR020045:IPR012337:IPR 002421:IPR008918:IPR001098:IPR018320:IPR020046:IPR020047; KEGG: hor:Hore_04860 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; PRIAM: DNA-directed DNA polymerase; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; DNA-directed DNA polymerase; SPTR: B8D217 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: 3'-5' exonuclease; 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I" /codon_start=1 /transl_table=11 /product="DNA polymerase I" /protein_id="YP_003826952.1" /db_xref="GI:302391132" /db_xref="GeneID:9512344" /translation="MEDKKELFLLDGSSLLHRAFYALPESLQTSDGEYTNGVFGFTKM LLRLIEEEDPDSLAVAFDLAGPTFRHEEYEEYKANRKETPDKLKPQFGLMKEVLEAFR IPVVELEGYEADDIIGTLARQAEEEGYQVTIVTGDRDALQLVTEQTKIRYTKRGITNI VDYDLEKVEEEYELEPRKLIDKKGLMGDKSDNIPGVDGIGKKTSTKLLHQFGSLEEVL DNIDQVSGKKRKQTLKEQADRARMSKKLATIKLDVPIECDLDEFKLEEPDQEKLINIL SRLEFNSLLKEFGGHETLNLTGGFEVITDLTEIDRVLSMLDEVESFGFKFNFASTKLY QQKVEGLTVASDEEACYIDTSDLDLAELIDKLQPYFEDYELNKLSLNTKENLIYLKEQ GVEVKGISFDPLLADYLLRPSAKEQDLESILTDQLQMELEKTESEAETEVQQVRILFK LQDKLTDKLADKGLMELFIDVELPLIPILAQMELNGIAVDQDMIQELSNKLEEKLDSL RSRAYELAGEEFNLNSPKQLGEILFEKLGLPVIKRTKTGYSTSASVLEKLEDKHEIVP LILEYRKYQKLKSTYVDPLPDLINPKTERIHTSFNQLVTATGRLSSTEPNLQNIPIRT EEGRRIRKVFVAEERKELLAVDYSQIELRVLAHISQDENLIAAYREGQDIHTKTAAEV FGLEASEVSYQQRRRAKAINFGIAYGISPWGLAKDINVSKQEAEDYINQYLNRYPKVK EYMDHQIKQAKEEGYVTTILNRRRYLPEINSSNYHRRSFGERMAINTPIQGSAADIMK LAMLESARVLDERELDTKILLQVHDELIFEVPPEELEEVQQVIKAEMEDVIELDVPLK VDLKVGSNWRDMNEVK" misc_feature 370739..373333 /locus_tag="Acear_0340" /note="DNA polymerase I; Provisional; Region: PRK05755" /db_xref="CDD:180237" misc_feature 370748..371209 /locus_tag="Acear_0340" /note="PIN domain of the 5'-3' exonuclease of Taq DNA polymerase I and homologs; Region: PIN_53EXO; cd09859" /db_xref="CDD:189029" misc_feature order(370760..370762,370913..370915,371063..371065, 371069..371074,371138..371140,371144..371146) /locus_tag="Acear_0340" /note="active site" /db_xref="CDD:189029" misc_feature order(370760..370762,371069..371071,371138..371140) /locus_tag="Acear_0340" /note="metal binding site 1 [ion binding]; metal-binding site" /db_xref="CDD:189029" misc_feature 370931..370969 /locus_tag="Acear_0340" /note="putative 5' ssDNA interaction site; other site" /db_xref="CDD:189029" misc_feature order(371063..371065,371072..371074) /locus_tag="Acear_0340" /note="metal binding site 3; metal-binding site" /db_xref="CDD:189029" misc_feature order(371138..371140,371144..371146) /locus_tag="Acear_0340" /note="metal binding site 2 [ion binding]; metal-binding site" /db_xref="CDD:189029" misc_feature 371255..371476 /locus_tag="Acear_0340" /note="H3TH domain of the 5'-3' exonuclease of Taq DNA polymerase I and homologs; Region: H3TH_53EXO; cd09898" /db_xref="CDD:188618" misc_feature order(371285..371308,371312..371341,371345..371356) /locus_tag="Acear_0340" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:188618" misc_feature order(371291..371293,371300..371302) /locus_tag="Acear_0340" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:188618" misc_feature 371729..372172 /locus_tag="Acear_0340" /note="inactive DEDDy 3'-5' exonuclease domain of Bacillus stearothermophilus DNA polymerase I and similar family-A DNA polymerases; Region: DNA_polA_I_Bacillus_like_exo; cd06140" /db_xref="CDD:176652" misc_feature 372197..373324 /locus_tag="Acear_0340" /note="Polymerase I functions primarily to fill DNA gaps that arise during DNA repair, recombination and replication; Region: DNA_pol_A_pol_I_C; cd08637" /db_xref="CDD:176474" misc_feature order(372443..372445,372455..372457,372464..372469, 372542..372550,372554..372556,372560..372571, 372665..372670,372752..372754,372812..372814, 372824..372826,373076..373078,373097..373099, 373190..373198) /locus_tag="Acear_0340" /note="active site" /db_xref="CDD:176474" misc_feature order(372443..372445,372455..372457,372464..372469, 372542..372550,372554..372556,372560..372571, 372848..372850,373073..373078,373085..373087, 373097..373099,373190..373198) /locus_tag="Acear_0340" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:176474" misc_feature order(372665..372670,372674..372676,372752..372754, 372812..372814,372824..372826,373196..373198) /locus_tag="Acear_0340" /note="catalytic site [active]" /db_xref="CDD:176474" gene 373370..374764 /locus_tag="Acear_0341" /db_xref="GeneID:9512345" CDS 373370..374764 /locus_tag="Acear_0341" /note="COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: mta:Moth_1542 microcin-processing peptidase 2; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Q2RI88 Putative uncharacterized protein; PFAM: Putative modulator of DNA gyrase" /codon_start=1 /transl_table=11 /product="peptidase U62 modulator of DNA gyrase" /protein_id="YP_003826953.1" /db_xref="GI:302391133" /db_xref="GeneID:9512345" /translation="MLSEERIDKVLKSALDKGGEFAELFFEKKESNQLSMESSRLEKV KTGFDLGVGIRVINGDQVSYAYTDDITLDSLLKTAKAAGTASKYNEDVTINNLQQKNT DSVHQIEVRPETVEKLKKKEVLKTADKSARSVDQRIQQVMVSYIDYYQQVLIANSTGL LVEDERVRTRLMVNAIASDGKIIQTGRETPGKHVGFELFDEYSPEEVGKKAGQKAITM LEARPAPSARMPVVVNHGFGGVLFHEACGHGLEADAVQKGSSVYTGRIGEQVANEKVT AIDDATVLNEWGSFVVDDEGHEAEETVLIKDGELTDYMYDYKTAKKEDRESTGNGRRQ SYQSRPIPRMTNTFIAPGESKPQEIINSVDQGLYAKSLSGGQVEPATGDFTFTVAEGY LIEDGEVSEPVRNATLVGNGPESLHRITMVGDDLEHAPGMCGKEGQSIPAAVGQPTLL IEELTVGGTEREEE" misc_feature 373379..374746 /locus_tag="Acear_0341" /note="Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]; Region: TldD; cl00398" /db_xref="CDD:193802" misc_feature 373427..374308 /locus_tag="Acear_0341" /note="Putative modulator of DNA gyrase; Region: PmbA_TldD; pfam01523" /db_xref="CDD:190021" gene 374766..376112 /locus_tag="Acear_0342" /db_xref="GeneID:9512346" CDS 374766..376112 /locus_tag="Acear_0342" /note="COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: drm:Dred_1049 peptidase U62, modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: A4J3D1 peptidase U62, modulator of DNA gyrase; PFAM: Putative modulator of DNA gyrase" /codon_start=1 /transl_table=11 /product="peptidase U62 modulator of DNA gyrase" /protein_id="YP_003826954.1" /db_xref="GI:302391134" /db_xref="GeneID:9512346" /translation="MALDLKQIIAQGEELGVDDIELFYEESSENNIKIYEGEVESLKS ANAKGLGIRVFIDDKMGFAYTSNFSAEEIEKTLQEAIANAEVASTDEYRTLPETVEKV EKLDLYSDDLAAAELEEKIQLALDLEAAALEYDERVDSVDTVGYGDNEVEIRIVNSKG FNESYRQNQCYAYSYVIAREGEDAETGMAITYGDSVAELTPQKTGKEAAENAVALLGG QPVESQKAPVVFPPEVGSMFMYVLSQALTAEAVQKGKSVFAQKVGEEVAAKEVNIIDN GLLEEGLATAPFDGEGVPSAKTEIIKDGKLKTFLYDTYTANKGNGESTGNASRGSYRG IPGVSPSNFYLANGDSSAEGVLSSVDNGFYVMKVSGLVTGGANPISGDFSVGATGRWI EDGELTKPVREITIAGNLIDFLQDIDMIGDNLKFNPLIGSYATPTFRVKNLAISGS" misc_feature 374766..376106 /locus_tag="Acear_0342" /note="Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]; Region: TldD; cl00398" /db_xref="CDD:193802" misc_feature 374817..375692 /locus_tag="Acear_0342" /note="Putative modulator of DNA gyrase; Region: PmbA_TldD; pfam01523" /db_xref="CDD:190021" gene 376244..377137 /locus_tag="Acear_0343" /db_xref="GeneID:9512347" CDS 376244..377137 /locus_tag="Acear_0343" /note="COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: hor:Hore_04060 cation diffusion facilitator family transporter; PFAM: cation efflux protein; SPTR: B8D1T7 Cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter" /codon_start=1 /transl_table=11 /product="cation diffusion facilitator family transporter" /protein_id="YP_003826955.1" /db_xref="GI:302391135" /db_xref="GeneID:9512347" /translation="MAVNSRYEVSQKISIITLISNLVLAGGKILIGLCFHSQGLFADG LHSASDVISTVIVMVGNTISKEPPDEEHPYGHGKAESIATKLLGIFLIIGGLGILKET VTLIINDRIKVPGNLVLWAALGSIIMKEVMYQYTYRIGQKVNNQALVADAIHHRTDAF SSVAALVGAGGAKLGYPILDPIAGLVVALCILKTGIDIFQEAANELMDAAPEQEVFDK ILEIINSIDNVIEVKNLKIRSHGPDYFIDVKVIVDNQLSVIEGHEIAVQVRDEIQQWN DNIQEVLVHIDPEGAKEEYTQ" misc_feature 376244..377125 /locus_tag="Acear_0343" /note="Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]; Region: MMT1; COG0053" /db_xref="CDD:30402" misc_feature 376310..377110 /locus_tag="Acear_0343" /note="Cation efflux family; Region: Cation_efflux; cl00316" /db_xref="CDD:193765" gene 377255..377923 /locus_tag="Acear_0344" /db_xref="GeneID:9512348" CDS 377255..377923 /locus_tag="Acear_0344" /note="COGs: COG1971 membrane protein; InterPro IPR014205:IPR003810; KEGG: bha:BH3151 hypothetical protein; PFAM: protein of unknown function DUF204; SPTR: Q9K856 BH3151 protein; TIGRFAM: sporulation protein YtaF; PFAM: Domain of unknown function DUF; TIGRFAM: sporulation protein YtaF" /codon_start=1 /transl_table=11 /product="sporulation protein YtaF" /protein_id="YP_003826956.1" /db_xref="GI:302391136" /db_xref="GeneID:9512348" /translation="MQIIPILLLALAISLDGLAVGITYGMRKIKLPLLSLIIISLTSA ISVLISMLFGHLITNFLSVKVTEVLGGSILILIGLWILYQAVRQLLIEQTMNADISVN NNSISDQPLFDFKIKSLGIVIKILKEPTRADFDYSGTISKQEAVFLGFALALDGFGAG IGAAMTGFAPLLTASIAGVVIFGCLFLGLYLGDKYNLKEADSRITLLPGLLLIILGAV KLFK" misc_feature 377312..377836 /locus_tag="Acear_0344" /note="putative sporulation protein YtaF; Region: spore_YtaF; TIGR02840" /db_xref="CDD:163040" gene 377985..378599 /locus_tag="Acear_0345" /db_xref="GeneID:9512349" CDS 377985..378599 /locus_tag="Acear_0345" /EC_number="2.7.1.24" /note="COGs: COG0237 Dephospho-CoA kinase; InterPro IPR001977; KEGG: chy:CHY_1647 dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: Q3ABL6 Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase" /codon_start=1 /transl_table=11 /product="dephospho-CoA kinase" /protein_id="YP_003826957.1" /db_xref="GI:302391137" /db_xref="GeneID:9512349" /translation="MLIGLTGGIASGKSTVSNILKDIGIPVIDADLIAREVVKPGKPA WQKIVNTFGNEVLLPNQQLDREKLSQIIFENSKAKEKLDQITHPEIIREIKKRIDSLQ TQGEEVIVADIPLLIETGMVEFFDEIWVVYVSRQTQLKRLINRDEIDYQTAVNKIEAQ MPLEEKKEYADRLIVNEGDKGDLEDTIISIWREINAEKNCTNCP" misc_feature 377985..378590 /locus_tag="Acear_0345" /note="Dephospho-CoA kinase [Coenzyme metabolism]; Region: CoaE; COG0237" /db_xref="CDD:30586" misc_feature 377988..378530 /locus_tag="Acear_0345" /note="Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis; Region: DPCK; cd02022" /db_xref="CDD:30195" misc_feature order(378000..378002,378075..378077,378243..378245, 378324..378329,378462..378464) /locus_tag="Acear_0345" /note="CoA-binding site [chemical binding]; other site" /db_xref="CDD:30195" misc_feature order(378003..378011,378018..378023,378405..378407, 378510..378512) /locus_tag="Acear_0345" /note="ATP-binding [chemical binding]; other site" /db_xref="CDD:30195" gene 378568..378948 /locus_tag="Acear_0346" /db_xref="GeneID:9512350" CDS 378568..378948 /locus_tag="Acear_0346" /EC_number="4.2.3.3" /note="COGs: COG1803 methylglyoxal synthase; InterPro IPR018148:IPR004363:IPR011607; KEGG: hor:Hore_04890 dephospho-CoA kinase; PFAM: MGS domain protein; PRIAM: methylglyoxal synthase; SPTR: B8D220 Dephospho-CoA kinase; TIGRFAM: methylglyoxal synthase; PFAM: MGS-like domain; TIGRFAM: methylglyoxal synthase" /codon_start=1 /transl_table=11 /product="methylglyoxal synthase" /protein_id="YP_003826958.1" /db_xref="GI:302391138" /db_xref="GeneID:9512350" /translation="MPKRIALIAHDEKKDDLIQFARDYQSTLSRFDLIATGTTGKLIN ERTELEVTRMQSGPLGGDQQIGAEVAHDRLDGIIFLRDPLTAQPHEPDVSALLRVCDV HDIPISTNLATAIMVVTYLEADFD" misc_feature 378577..378921 /locus_tag="Acear_0346" /note="Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to...; Region: MGS; cd01422" /db_xref="CDD:29634" misc_feature order(378589..378591,378607..378609,378673..378675, 378679..378684,378733..378738,378751..378753, 378832..378834) /locus_tag="Acear_0346" /note="active site" /db_xref="CDD:29634" misc_feature order(378598..378600,378679..378681,378730..378735, 378739..378744,378754..378759,378775..378777, 378814..378816,378841..378843,378850..378852, 378859..378867,378871..378888,378895..378906, 378913..378915) /locus_tag="Acear_0346" /note="dimer interfaces [polypeptide binding]; other site" /db_xref="CDD:29634" misc_feature order(378751..378753,378832..378834) /locus_tag="Acear_0346" /note="catalytic residues [active]" /db_xref="CDD:29634" gene 378963..379541 /locus_tag="Acear_0347" /db_xref="GeneID:9512351" CDS 378963..379541 /locus_tag="Acear_0347" /note="COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: dae:Dtox_2419 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; SPTR: C1TF21 Soluble lytic murein transglycosylase-like protein; PFAM: transglycosylase SLT domain" /codon_start=1 /transl_table=11 /product="Lytic transglycosylase catalytic" /protein_id="YP_003826959.1" /db_xref="GI:302391139" /db_xref="GeneID:9512351" /translation="MVIGPKELKIILIILLCLIISAVVIINFKNILKIFYPLYYEDLI FKYAEKNNLDPYLVAAVIRVESKFNSEATSRQGARGLMQIMPETGEWIADQLKIDDFD TDDLYDPEVNISFGSWYLAHLKRFFDGNLTVVIAAYNGGQGNVNKWLELKEWTGKEKD SKQIPFPETRDYVEKVLNTYQWYHKIYRPETR" misc_feature 379125..379505 /locus_tag="Acear_0347" /note="Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain. Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic 'goose-type' lysozymes (GEWL). LTs catalyze...; Region: LT_GEWL; cd00254" /db_xref="CDD:29556" misc_feature order(379155..379157,379215..379217,379317..379319, 379374..379376) /locus_tag="Acear_0347" /note="N-acetyl-D-glucosamine binding site [chemical binding]; other site" /db_xref="CDD:29556" misc_feature 379155..379157 /locus_tag="Acear_0347" /note="catalytic residue [active]" /db_xref="CDD:29556" gene 379716..380309 /locus_tag="Acear_0348" /db_xref="GeneID:9512352" CDS 379716..380309 /locus_tag="Acear_0348" /note="InterPro IPR001455:IPR019870; KEGG: cdf:CD3667 hypothetical protein; SPTR: B6G1W1 Putative uncharacterized protein; TIGRFAM: selenium metabolism protein YedF; PFAM: SirA-like protein; DsrE/DsrF-like family; TIGRFAM: selenium metabolism protein YedF" /codon_start=1 /transl_table=11 /product="selenium metabolism protein YedF" /protein_id="YP_003826960.1" /db_xref="GI:302391140" /db_xref="GeneID:9512352" /translation="MIKVDARGLDCPQPVIKTKDAINKGEKVETLVDNKTACKNLQKL GDKMNCNVEVMEVDDDFQLTFIPEEELVTSSTTSEELDDTGDSGGKVYFISSDVVGEG DQELGEILIKGFTYTLTEIAPKPKAIVFMNDGVKLPTLNDEVIDNLKILEEAGIEIIS CGTCLDYYGLKDELAVGEVSNMYTIVETLNNNPVVTV" misc_feature 379722..379907 /locus_tag="Acear_0348" /note="SirA_like_N, a protein of unknown function with an N-terminal SirA-like domain. The SirA, YedF, YeeD protein family is present in bacteria as well as archaea. SirA (also known as UvrY, and YhhP) belongs to a family of a two-component response...; Region: SirA_like_N; cd03421" /db_xref="CDD:48207" misc_feature 379725..380288 /locus_tag="Acear_0348" /note="selenium metabolism protein YedF; Region: selenium_YedF; TIGR03527" /db_xref="CDD:163306" misc_feature order(379725..379730,379737..379739,379746..379757, 379761..379763) /locus_tag="Acear_0348" /note="CPxP motif; other site" /db_xref="CDD:48207" misc_feature <380094..380288 /locus_tag="Acear_0348" /note="DsrE/DsrF-like family; Region: DrsE; cl00672" /db_xref="CDD:186138" gene 380875..381828 /locus_tag="Acear_0349" /db_xref="GeneID:9512353" CDS 380875..381828 /locus_tag="Acear_0349" /note="COGs: COG0709 Selenophosphate synthase; InterPro IPR016188:IPR010918:IPR004536:IPR000728; KEGG: mta:Moth_1625 selenophosphate synthase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; SPTR: Q2RI12 Selenophosphate synthase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein" /codon_start=1 /transl_table=11 /product="selenide, water dikinase" /protein_id="YP_003826961.1" /db_xref="GI:302391141" /db_xref="GeneID:9512353" /translation="MRSVPTVTNERELVGLSTSDDASVIKLNEKQALIQSLDFFTPVV EDPYLFGQIAAANALSDIYAMGGEPLSAMNIVGFPPELDTEILEKILQGGADKVKEAG AILAGGHTIEDEETKYGLSASGLVAPADMVSNAGAEPGDKLVLTKPLGIGIAVTAING GLSPGGENSPAIQEMLTLNKDAAEVMQKIGVNAATDVTGFGLLGHLWELVSASGVQAV VNFSTIPLLSEVIEWAEMGLVPGGAYSNQEYINEHIDFTAGFEEAKQNVLFDPQTSGG LLISVTADKADKLEIALQKKGVTSAIIGRIESGEAAIKVKE" misc_feature 380875..381792 /locus_tag="Acear_0349" /note="Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes. The...; Region: SelD; cd02195" /db_xref="CDD:100031" misc_feature order(380968..380979,380983..380985,380989..380991, 381055..381057,381085..381087,381094..381096, 381103..381105,381199..381201,381220..381225, 381235..381237,381496..381498) /locus_tag="Acear_0349" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100031" misc_feature order(381043..381045,381055..381057,381193..381201) /locus_tag="Acear_0349" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:100031" gene 382150..382830 /locus_tag="Acear_0350" /db_xref="GeneID:9512354" CDS 382150..382830 /locus_tag="Acear_0350" /note="KEGG: hor:Hore_04960 hypothetical protein; SPTR: B8D227 Putative uncharacterized protein; PFAM: UTRA domain" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_003826962.1" /db_xref="GI:302391142" /db_xref="GeneID:9512354" /translation="MSLEEMTKKEQIINFARNDPFLKISDIAEHVQTTPRYVRTILSE ADISLMKLREKYARNMEERLQVKDGNSQKAEIRLTNQQGDMETGNIRFNQITEQEFDE LQKIDSEQELYKVSQRQLVNGEPFGLQEVITYLDSEVIEEKNQDLNSLYELFGEDSLS KLKFKNNVMQVETANQFLAKLLDIDRDAPIIKSQRLILIGKMSVAIENCFFDANEVEL VVPGEFVI" misc_feature 382462..382737 /locus_tag="Acear_0350" /note="UTRA domain; Region: UTRA; cl06649" /db_xref="CDD:195338" gene 383174..384475 /locus_tag="Acear_0351" /db_xref="GeneID:9512355" CDS 383174..384475 /locus_tag="Acear_0351" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: tex:Teth514_2350 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003826963.1" /db_xref="GI:302391143" /db_xref="GeneID:9512355" /translation="MKLAKYFIHKPNQIQQVVLGCLAYASARLYNIGNYQRKNWSKDS DEDYPDWYKQKKQLKDNFWYKNLPSQTAQETLKILSDNWDSFYQSMEDYQDNPDKYNG NPNPPNYKSKDSKFNFRYLNNGFKIIDGKLRLSIPKQLKKYLKEEYSITNKFLWIRVP NELLSSNRDILNSTTRIEFKPLSDDTYKVILTYKVDTPTIKEDNGNYLSIDLGINNLM TCYSNQNQESFIIDGGQYLAINRYFDKQIKHYQSILNGQGKKTSKRIQQLYKKRRKQL FHLIHSATKKVVNYCIENNISRVIVGNIKNIRDDADLGKQTNQKLHKLPFDIIYHQLE YKLHLQGITLIKKSEKYTSQCSPYSKKVTKKYGNKSNRIKRGLYVDEDNNQAFNADSV GAFNILRKYLQQRRKGKDITLQVKGLSNPVIFNWNNHQFAA" misc_feature 383174..384379 /locus_tag="Acear_0351" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature 383360..384097 /locus_tag="Acear_0351" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature 383987..384232 /locus_tag="Acear_0351" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature 384149..384373 /locus_tag="Acear_0351" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 385142..386131 /locus_tag="Acear_0352" /db_xref="GeneID:9512356" CDS 385142..386131 /locus_tag="Acear_0352" /note="COGs: COG5598 Trimethylamine:corrinoid methyltransferase; InterPro IPR010426; KEGG: dsy:DSY4970 hypothetical protein; PFAM: trimethylamine methyltransferase; SPTR: Q24MI3 Trimethylamine methyltransferase mttB; PFAM: Trimethylamine methyltransferase (MTTB)" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase" /protein_id="YP_003826964.1" /db_xref="GI:302391144" /db_xref="GeneID:9512356" /translation="MTIRNSRSYYPNKTGFSVDMFTDEELEEIHLATLEMLWDNGMHV TNEEALDIFADAGAKVNRSEGKVRIPPYMVEDAIKSAPPQILMAGRDPENDVVIGGSR VNFTTFGAGVKIEDLETGGLRDTLKQDVADTALVADYLDQIDIYSHAVTGGDSPDANI DLHDAEAFLNNTTKHCHHIDLTCGENAKKYFEMGAAIMGGMDELRERPIISGLVCPQS PLELHGDAAQIIIEHARAGIPVNVLSMAMSGATCPVSVAGTLVDHNAEVLTGVILTQL VNKGAPVIYGSSTTTFDLQHSTAPVGAPELGMCNAGVAKLARYYNLPSYTAGG" misc_feature 385154..>386125 /locus_tag="Acear_0352" /note="Trimethylamine methyltransferase (MTTB); Region: MTTB; cl02383" /db_xref="CDD:174723" gene 386177..386602 /locus_tag="Acear_0353" /db_xref="GeneID:9512357" CDS 386177..386602 /locus_tag="Acear_0353" /note="COGs: COG5598 Trimethylamine:corrinoid methyltransferase; InterPro IPR010426; KEGG: dsy:DSY4969 hypothetical protein; PFAM: trimethylamine methyltransferase; SPTR: Q24MI3 Trimethylamine methyltransferase mttB; PFAM: Trimethylamine methyltransferase (MTTB)" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase" /protein_id="YP_003826965.1" /db_xref="GI:302391145" /db_xref="GeneID:9512357" /translation="MTYMLPAMAGANVLYGSGMIELGVTFSYTQLMIDNEIARMVRRV INGVEVNDETLATDIMKEVGCGGNFLTQQHTLDLMDQEQSRSDLFDRKMREGWENDGS QGAAEKATERAKTILNDHTPEPLDQEVQDKLSEIVESVK" misc_feature <386177..386590 /locus_tag="Acear_0353" /note="Trimethylamine methyltransferase (MTTB); Region: MTTB; cl02383" /db_xref="CDD:174723" gene 386763..387395 /locus_tag="Acear_0354" /db_xref="GeneID:9512358" CDS 386763..387395 /locus_tag="Acear_0354" /note="COGs: COG5012 cobalamin binding protein; InterPro IPR003759:IPR006158; KEGG: dth:DICTH_0565 trimethylamine corrinoid protein 2; PFAM: cobalamin B12-binding domain protein; methionine synthase B12-binding module cap domain protein; SPTR: B5YD39 Trimethylamine corrinoid protein 2; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, methanosarcina family; methylmalonyl-CoA mutase C-terminal domain" /codon_start=1 /transl_table=11 /product="cobalamin B12-binding domain protein" /protein_id="YP_003826966.1" /db_xref="GI:302391146" /db_xref="GeneID:9512358" /translation="MSQFDDIAEAVIDGDEERVEELTQNLVDEGEEPSEIIKEGLVAG MDVVGDRFKAEEMFVPQVLIAAEAMAKGMDIVKPLLADDDTSSEGLVLMATVEDDLHD IGKNLASMLLEGSGFNVIDLGTDIPPEEFVEGVKEHEPDIVGMSSLLTTTMPNMESTI EALEEAGIRDEVKIMVGGAPVSQEFADEIGADAYAPDGSTASDLAKEIID" misc_feature 386781..387383 /locus_tag="Acear_0354" /note="B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or...; Region: corrinoid_protein_B12-BD; cd02070" /db_xref="CDD:30208" misc_feature 386781..387365 /locus_tag="Acear_0354" /note="methyltransferase cognate corrinoid proteins, Methanosarcina family; Region: pyl_corrinoid; TIGR02370" /db_xref="CDD:131423" misc_feature order(387054..387074,387081..387083,387192..387200, 387204..387212,387297..387299,387345..387347, 387354..387356,387363..387365) /locus_tag="Acear_0354" /note="B12 binding site [chemical binding]; other site" /db_xref="CDD:30208" misc_feature 387063..387065 /locus_tag="Acear_0354" /note="cobalt ligand [ion binding]; other site" /db_xref="CDD:30208" gene 387459..387743 /locus_tag="Acear_0355" /db_xref="GeneID:9512359" CDS 387459..387743 /locus_tag="Acear_0355" /note="KEGG: dat:HRM2_15230 hypothetical protein; SPTR: C0Q9R8 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826967.1" /db_xref="GI:302391147" /db_xref="GeneID:9512359" /translation="MAQYTFRKKQDLFSLLKEMKLWPSRSGLLHGIKSIDTLGNYARL TLYCGQEITVKNSKNSRAARWLRNTMMIEPCTECEVPDWKIEKYSNTTFK" misc_feature 387480..387740 /locus_tag="Acear_0355" /note="pyrrolysyl-tRNA synthetase, N-terminal region; Region: PylS_Nterm; TIGR03912" /db_xref="CDD:188427" gene 387770..388609 /locus_tag="Acear_0356" /db_xref="GeneID:9512360" CDS 387770..388609 /locus_tag="Acear_0356" /EC_number="6.1.1.26" /EC_number="6.1.1.-" /note="InterPro IPR006195:IPR002314; KEGG: dae:Dtox_0027 Pyrrolysine-tRNA ligase; PFAM: tRNA synthetase class II (G H P and S); PRIAM: Pyrrolysine--tRNA(Pyl) ligase; SPTR: C1TAS2 Lysyl-tRNA synthetase (Class II); PFAM: tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: pyrrolysyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="Pyrrolysyl-tRNA synthetase" /protein_id="YP_003826968.1" /db_xref="GI:302391148" /db_xref="GeneID:9512360" /translation="MKFTQAQQQRIIELDAEGKYKGYIKDKEFDSSKEREDDFQKIED DLVNKNKKRLEELQGRHQQPVLRRMEFRLVELLKESGFMEVVTPIKLAKGHLEKMGID EEHSLWKQVYWLEEDNYCLRPMLAPNLYYLLGYFENSLSKPIKIFEVGPCFRRESRGS KHLSEFTMMNLVELGPKGDPTERLKSLIAELMDYLELEYELEEEESVVYGKTIDVVVN GIEVGSGAVGPHLLDEAWNISDSWVGVGFGLERLIICKEEFESIKRVGRSLIYQDGVR LNI" misc_feature 387962..388525 /locus_tag="Acear_0356" /note="Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it...; Region: class_II_aaRS-like_core; cd00768" /db_xref="CDD:29813" misc_feature 388013..388027 /locus_tag="Acear_0356" /note="motif 1; other site" /db_xref="CDD:29813" misc_feature order(388016..388021,388025..388027,388160..388165, 388226..388228,388232..388234,388334..388336) /locus_tag="Acear_0356" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29813" misc_feature order(388139..388141,388145..388147,388229..388231, 388265..388267,388271..388273,388277..388279, 388430..388435,388445..388447,388499..388504, 388508..388513,388520..388522) /locus_tag="Acear_0356" /note="active site" /db_xref="CDD:29813" misc_feature 388226..388234 /locus_tag="Acear_0356" /note="motif 2; other site" /db_xref="CDD:29813" misc_feature order(388511..388513,388520..388522) /locus_tag="Acear_0356" /note="motif 3; other site" /db_xref="CDD:29813" gene 388627..389733 /locus_tag="Acear_0357" /db_xref="GeneID:9512361" CDS 388627..389733 /locus_tag="Acear_0357" /EC_number="2.8.1.6" /note="COGs: COG0502 Biotin synthase; InterProIPR013785:IPR002114:IPR006638:IPR005244:IPR 007197; KEGG: dae:Dtox_0028 radical SAM domain protein; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1TAS3 Biotin synthase; PFAM: radical SAM superfamily" /codon_start=1 /transl_table=11 /product="biotin synthase" /protein_id="YP_003826969.1" /db_xref="GI:302391149" /db_xref="GeneID:9512361" /translation="MKENNLDLQVILDKAKSGRELKFEEIYKILTLKDKESLEQVFKA AREIRRNYFGNKIFLYGFVYFSTYCRNECTFCYYRKSNNKSPRYRKTPDEILQIAESL MNSGVHLIDLTMGEDPAIYTENNFGSLKEIASQIKDQTNLPVMVSPGVLPEDEVLELE DCGADWYACYQETHNRDLFTELRVNQSYDRRMETKMLAKNNGLLIEDGILLGVGEEIE DRVNSILTMKELGVHQGRVMSFVAQEGTPMADSNTPPRREELLVIAALRLVLQDRLIP ASLDVDGIEGLEDRLNAGANVVTSLIPPSSGLAGVSNSTLDIDEGHRTVNGVQKVIEE LDLKIAAPELYKEWVETKKMNLNHLDRDVIVCRG" misc_feature 388639..389673 /locus_tag="Acear_0357" /note="pyrrolysine biosynthesis radical SAM protein; Region: pyrrolys_PylB; TIGR03910" /db_xref="CDD:188425" misc_feature 388813..389298 /locus_tag="Acear_0357" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene 389750..391714 /locus_tag="Acear_0358" /db_xref="GeneID:9512362" CDS 389750..391714 /locus_tag="Acear_0358" /note="COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit; InterPro IPR008040:IPR002821; KEGG: mac:MA4203 hydantoinase; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; SPTR: Q8TIE9 Hydantoinase; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region" /codon_start=1 /transl_table=11 /product="Hydantoinase/oxoprolinase" /protein_id="YP_003826970.1" /db_xref="GI:302391150" /db_xref="GeneID:9512362" /translation="MNIILGIDAGGTYTDSVLYDRGNQELIDKNKALTTYYNLTEGIN NTITGLKEEWFDTVELVTLSTTLATNAIVEGRGGRVGLLLLGYDQQLMEQFTLDEEIP GKKREIIKGRFNTRGEKIESLDEEEIEKIIKKWQGSIDAVAISGYMSPRNPAHELKAK GILAEMTDLPVVCGHELTNKLNSIQRATTVALNASLIPMIKELNQKVKEVLQVNGIEA PVMMVKGDGSLVSSQAVIDKPIETVLSGPAASTIGAKHLGEVNEGVIVDIGGTTTDIS VIKDGYPDLNSDGAVVGGWLSSIEAIKFKTIGLGGDSRIYFNQDGELKIGPKRVIPYS AAAVEHREVLTDLHRMSEEKVSGARREFLTLNRAGVDIEFNKQEEQIINVLETGPKSI AQIVESIGLVSHRILDLERLERLGVIKRIGLTPTDVLHVLGEYTIWEEEAAELGLELL MKRMKSDKLTLAEKLKERVINKEAKEIIAYLISQDYEDYNQNRCGLCERLIESCLTEE TKNFLLDFKSQLPIVALGAPAEAYMSNLDDYLETDIIVPENYEVANAVGTAVGRILIK QEVEIKVRGNDYIVHAPGRKKEFIDLEEAVEWAKQKGKKAAVKEAKTAGAKSIEVEIE VERRKADISAQGSKMLLGIGVKIIVTGLPF" misc_feature 389750..391633 /locus_tag="Acear_0358" /note="N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]; Region: HyuA; COG0145" /db_xref="CDD:30494" misc_feature 389762..390250 /locus_tag="Acear_0358" /note="Hydantoinase/oxoprolinase N-terminal region; Region: Hydant_A_N; pfam05378" /db_xref="CDD:147519" misc_feature 390305..>390745 /locus_tag="Acear_0358" /note="Hydantoinase/oxoprolinase; Region: Hydantoinase_A; cl00668" /db_xref="CDD:163895" misc_feature <391295..391438 /locus_tag="Acear_0358" /note="Hydantoinase/oxoprolinase; Region: Hydantoinase_A; cl00668" /db_xref="CDD:163895" gene 391753..392925 /locus_tag="Acear_0359" /db_xref="GeneID:9512363" CDS 391753..392925 /locus_tag="Acear_0359" /note="COGs: COG0439 Biotin carboxylase; InterProIPR013817:IPR011761:IPR016185:IPR016040:IPR 006076:IPR003806; KEGG: dhd:Dhaf_4856 protein of unknown function DUF201; PFAM: protein of unknown function DUF201; FAD dependent oxidoreductase; SPTR: Q24MJ6 Putative uncharacterized protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase; ATP-grasp domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826971.1" /db_xref="GI:302391151" /db_xref="GeneID:9512363" /translation="MRRIAIIGGGLQGIEVTYLAQKAGYKVLLIDKRRDVPAFNLADE TIICDIMKEKEKFKESLDGVDLILPTTENNAALQTLKSMDSKIDIPIVFDWAAYQITN SKEKSKKLFSEYDIPQADLWPKADFPLIIKPSSASGSQEVHRAENKQELDEVLTNLKA AESDLIIEEYLPGPSYSIEVIGYQDQILPLVTTYLDFDVDYDCRQVISTDNLEFIDTE LRERLNELSSKIAKKIGLNGIMDLEVIRGENDIKVLEIDARFPSQTPITVFWATGLNM VELLVKLYLEEGIEPESKDSFSENKSVIYEHIKMQNEVLEVCGEHIISRSTDLRLERD FFGAVEAITNYGFRKQEWVATLIFTADSLVEAFKQRDRTLNKISEINSLSKTKVKR" misc_feature 391753..>391851 /locus_tag="Acear_0359" /note="NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis]; Region: Gid; cl11520" /db_xref="CDD:187089" misc_feature 391759..392889 /locus_tag="Acear_0359" /note="pyrrolysine biosynthesis protein PylC; Region: pyrrolys_PylC; TIGR03909" /db_xref="CDD:188424" misc_feature 392104..392532 /locus_tag="Acear_0359" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" gene 392930..393736 /locus_tag="Acear_0360" /db_xref="GeneID:9512364" CDS 392930..393736 /locus_tag="Acear_0360" /note="InterPro IPR016040; KEGG: dae:Dtox_0030 hypothetical protein; SPTR: C1TAS5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826972.1" /db_xref="GI:302391152" /db_xref="GeneID:9512364" /translation="MTRLFTDQISHIPETIDEYNQELKDKTGCGLVGLANHALGTEYE TAFLAQKRAAVVPVTVGEGIIQGFSKSVAAILEYMGFEILVTNSSDVKGIKEAYQKKA DILLMADDDEFIALNLEENKYVDNNWATARAYVNALELMVGGLKDRTVVVQGLGPIGR EAVRALIEKEARIKVYDVDEQKMIKLTEEVESVEAVKNPEQELKHNKLILEATPVDNT IQEDYIDQKTYISAPGVPLGVCKTAISSIEDRLIHDPLQLGVSLMAAGVL" misc_feature 392933..393733 /locus_tag="Acear_0360" /note="pyrrolysine biosynthesis protein PylD; Region: pyrrolys_PylD; TIGR03911" /db_xref="CDD:188426" misc_feature 393362..>393529 /locus_tag="Acear_0360" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature order(393395..393403,393458..393463) /locus_tag="Acear_0360" /note="NAD(P) binding pocket [chemical binding]; other site" /db_xref="CDD:133449" gene complement(393731..394600) /locus_tag="Acear_0361" /db_xref="GeneID:9512365" CDS complement(393731..394600) /locus_tag="Acear_0361" /note="COGs: COG0583 transcriptional regulator; InterPro IPR011991:IPR000847:IPR005119; KEGG: hor:Hore_05450 transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: B8D275 transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_003826973.1" /db_xref="GI:302391153" /db_xref="GeneID:9512365" /translation="MNLRELKIFVTVCETKNMSAAAKKLYISQPAISQTISTLEDKLN LKLFDRLNRRLKLTHPGEILLNYSKRILNLVNETKNAMEDISNLNQGQLRIGSSMTIG TYLLPQIIEEFQQKYKDINLPFIIDNTSVIEQMVLDNKIDLGLVEGPISSDNIVVEKF FTDQLQLVCSTKHEWSHWKNLSPEKINEEDFIMREEGSGTRKVIENILANFNISCQIT HVFNNIEAIKKAVAANIGVSILPEISTKEERKKGKITKVNISGIEFKRNFSIIYHKDK YRSEIFNKFIEHL" misc_feature complement(393746..394594) /locus_tag="Acear_0361" /note="LysR transcriptional regulator; Provisional; Region: rbcR; CHL00180" /db_xref="CDD:177082" misc_feature complement(394415..394594) /locus_tag="Acear_0361" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(393734..394327) /locus_tag="Acear_0361" /note="C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold; Region: PBP2_CysL_like; cd08420" /db_xref="CDD:176112" misc_feature complement(order(393902..393907,393911..393916, 393932..393949,394223..394243,394247..394249, 394259..394261,394268..394273,394277..394282)) /locus_tag="Acear_0361" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176112" gene 394789..394877 /locus_tag="Acear_R0032" /db_xref="GeneID:9512366" tRNA 394789..394877 /locus_tag="Acear_R0032" /product="tRNA-Leu" /db_xref="GeneID:9512366" gene 395220..396638 /locus_tag="Acear_0362" /db_xref="GeneID:9512367" CDS 395220..396638 /locus_tag="Acear_0362" /note="COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; InterProIPR012285:IPR017900:IPR017896:IPR009051:IPR 011538:IPR008703:IPR001450; KEGG: hor:Hore_14350 electron transport complex, RnfABCDGE type, C subunit; PFAM: Na-translocating NADH-quinone reductase subunit A; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8CY15 electron transport complex, RnfABCDGE type, C subunit; PFAM: Na(+)-translocating NADH-quinone reductase subunit A (NQRA); NQRA C-terminal domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit" /codon_start=1 /transl_table=11 /product="Na-translocating NADH-quinone reductase subunit A" /protein_id="YP_003826974.1" /db_xref="GI:302391154" /db_xref="GeneID:9512367" /translation="MKVKNKSFSGGYTFNLEGKPQDRVVELETPSKVVVPLKQGFGRE VEPNVEPGEEVKAGQIIGRDDESLSTPIQATVSGTVTEITDLPSNRRAVVIESDGTDD WQQLEDHSSNWNNLSAEEIEELLYTSGVTSLDNQGIPTRYKSSSISKDEVEHIIIEGT ESNPYNLSLSALLEENKLSQFVDGLQILHKVFPQAKVHVTINENRQQLIKELSDSAGN YDWIQLYSSAPKYPQGKDEILVPTILGDDYKVRASVASYGVIVLKVQTILHIYDAVVE GKPLIERMVSLAGEGWQENIHLKVRIGTSIEAIMKNYSGSDNQRLIIGNLLTDKSIAD YEIPVDRTFDNLNAIPEQEVGEPFAFARPGAQKYSYSNSFLSALLSEVSSKCDTNVHG EERACIFCGYCEDACPVDIIPHLVERYTAQSSVDEELIRYGIFDCIECNLCTFVCPSK RPVGKHIKQGKQFLLNKGYVVK" misc_feature 395232..396620 /locus_tag="Acear_0362" /note="C subunit; Region: rnfC; TIGR01945" /db_xref="CDD:162617" misc_feature 395628..396035 /locus_tag="Acear_0362" /note="Respiratory-chain NADH dehydrogenase 51 Kd subunit; Region: Complex1_51K; pfam01512" /db_xref="CDD:144926" misc_feature <396408..396455 /locus_tag="Acear_0362" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" gene 396694..397785 /locus_tag="Acear_0363" /db_xref="GeneID:9512368" CDS 396694..397785 /locus_tag="Acear_0363" /note="COGs: COG4658 NADH:ubiquinone oxidoreductase subunit RnfD; InterPro IPR011303:IPR004338; KEGG: dat:HRM2_06930 NqrB; PFAM: NQR2 and RnfD family protein; SPTR: C0QJ17 NqrB; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2, RnfD, RnfE family; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; electron transport complex, RnfABCDGE type, D subunit" /codon_start=1 /transl_table=11 /product="electron transport complex, RnfABCDGE type, D subunit" /protein_id="YP_003826975.1" /db_xref="GI:302391155" /db_xref="GeneID:9512368" /translation="MNGLRSFFDNLKENESLQPVKPVIDAMAAIFCGPDEVTASAPHI MDNNDLKRYMSMVILALLPSTFASIYFYGWRAVSIILVSYIVGGLTEVLFAIIRGHEI EEGFLVTGLIFPLVLPPTIPLWMVAVGSFFGVLFGKEVFGGTGRNVFNPAIAGRVFIS IAFPVAMTTKWAKPLVGGLGGFLKYSVPVDAMSAATPLAVFKTNGELAFSTFELLFGT TGGSMGETFRIGIIIGGLFLIAAKIVDWRIPTAYLGSVVILSAIGNQFLPGTVAPPLY QLLTGGLLFGAFFMATDPVTSPFTKGGTWIFGIFAGFLTLIFRSFSGYVEGVMFSILL ANSVTPLIDSMVLKTKFKPKDDGVVYNEN" misc_feature 396802..397749 /locus_tag="Acear_0363" /note="RnfE family; Region: NQR2_RnfD_RnfE; cl00779" /db_xref="CDD:186185" gene 397757..398401 /locus_tag="Acear_0364" /db_xref="GeneID:9512369" CDS 397757..398401 /locus_tag="Acear_0364" /note="COGs: COG2869 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrC; InterPro IPR007329; KEGG: fno:Fnod_0630 FMN-binding domain-containing protein; PFAM: FMN-binding domain protein; SPTR: A7HKQ2 FMN-binding domain protein; PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit" /codon_start=1 /transl_table=11 /product="FMN-binding domain protein" /protein_id="YP_003826976.1" /db_xref="GI:302391156" /db_xref="GeneID:9512369" /translation="MMGSFTMKTNTNLEQEVQTKDILLGKAKMIIFMLILGLVAAALL AGLGSYTKPLVEKNKELRTMQKVLESINVDYSSDNLTKVFKEKVEVVNEGEYKFYKTK EGEVAFKFEGEGIWAPIVGFAALDSDMETLEGISIMSQGETPGLGGRITEDWFLNQFK GLKRNPKIVVLKASKTADNPNEVDGIAGATLSGKALQKILNKNIEVALQKLEVN" misc_feature <398090..398359 /locus_tag="Acear_0364" /note="FMN-binding domain; Region: FMN_bind; cl01081" /db_xref="CDD:194030" gene 398403..399095 /locus_tag="Acear_0365" /db_xref="GeneID:9512370" CDS 398403..399095 /locus_tag="Acear_0365" /note="COGs: COG1347 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrD; InterPro IPR003667; KEGG: acl:ACL_0968 Na+-transporting NADH:ubiquinone oxidoreductase subunit D; PFAM: RnfA-Nqr electron transport subunit; SPTR: A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase subunit D; PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit" /codon_start=1 /transl_table=11 /product="RnfA-Nqr electron transport subunit" /protein_id="YP_003826977.1" /db_xref="GI:302391157" /db_xref="GeneID:9512370" /translation="MNLLKKLYYKIKYTRVFALLYKGIWQENDLLIASLGICSALAVT NRVANGIAMGLAVTFVILASSVLTATIRDYIPKRVRIVTYVIFISTFVVIVDQFLKAF FPAISRALGAYVGLIITNCLIMGRAESFASNNPVDSSIVDAFAHGMGYTIVLIIVSAV REVLAFGTILQIPVVGEAWTNWVVMAMAPGGFFVLAALTWVVREIQIYEEEEESPNSR AELDASEKVLSV" misc_feature 398442..399002 /locus_tag="Acear_0365" /note="Rnf-Nqr subunit, membrane protein; Region: Rnf-Nqr; cl00597" /db_xref="CDD:186097" gene 399149..399733 /locus_tag="Acear_0366" /db_xref="GeneID:9512371" CDS 399149..399733 /locus_tag="Acear_0366" /note="COGs: COG2209 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrE; InterPro IPR003667; KEGG: acl:ACL_0969 Na+-transporting NADH:ubiquinone oxidoreductase subunit E; PFAM: RnfA-Nqr electron transport subunit; SPTR: A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase subunit E; PFAM: Rnf-Nqr subunit, membrane protein" /codon_start=1 /transl_table=11 /product="RnfA-Nqr electron transport subunit" /protein_id="YP_003826978.1" /db_xref="GI:302391158" /db_xref="GeneID:9512371" /translation="MPESLSIFIAAITSHNLALTYILGMCPMLGVSKNLDTAVGMGIS VAFVVVVTSMVNWGIYNLILVPTGTEILNYVVFIVVIGASVQLLEMILEKFLPALYRA FGIFLPLITVNCVVLSISLFMTLRNYDFITTLVFALGSAIGWLIAIAIVAAIREKLKL TGDVPRGLQGPGIVMIILGIVALAFMGFGGMVSV" misc_feature 399149..399721 /locus_tag="Acear_0366" /note="Rnf-Nqr subunit, membrane protein; Region: Rnf-Nqr; cl00597" /db_xref="CDD:186097" gene 399734..400825 /locus_tag="Acear_0367" /db_xref="GeneID:9512372" CDS 399734..400825 /locus_tag="Acear_0367" /note="COGs: COG2871 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF; InterProIPR012675:IPR001221:IPR001709:IPR001041:IPR 017927:IPR017938:IPR008333:IPR001433; KEGG: acl:ACL_0970 Na+-transporting NADH:ubiquinone oxidoreductase subunit F; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; SPTR: A9NGV0 Na+-transporting NADH:ubiquinone oxidoreductase subunit F; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit" /codon_start=1 /transl_table=11 /product="oxidoreductase FAD/NAD(P)-binding domain protein" /protein_id="YP_003826979.1" /db_xref="GI:302391159" /db_xref="GeneID:9512372" /translation="MNIQPIYILASIFFGVAFVLAIADFLLTSNEQQVININDEEYIP AGDGTLLEVLGENGIFIPAGCGGKASCGQCKVTVKEGGGDILPTEEPFLDEEEREEGV RLACQVKVNEDMKLELDESLLDIEEYTARVAEVRSVTPTVKHVRLEMIEPTDIEFEAG QYAQIMIPGFEEYRAYSIASPPSMAREENALQFTIKLVPGGLCTSWVHFAMEEGDIVK FTGPFGHFYLDEESDREIILIGGGAGMAPMRGILERLDELGMPRPTRYYFGARNSDEL YYGDRFAELEEKYDNFEYIPALSDPTPEDKKNWDGPTGFVTDVLDEREGSLENAESYL CGPPPMLDAAERILVDHGMPEEKVMFDKF" misc_feature 399749..400822 /locus_tag="Acear_0367" /note="Na(+)-translocating NADH-quinone reductase subunit F; Provisional; Region: PRK05464" /db_xref="CDD:180101" misc_feature 399833..400078 /locus_tag="Acear_0367" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature order(399914..399919,399926..399928,399935..399937, 399944..399955,400046..400051) /locus_tag="Acear_0367" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature order(399926..399928,399944..399946,399953..399955, 400049..400051) /locus_tag="Acear_0367" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" misc_feature 400115..400822 /locus_tag="Acear_0367" /note="Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron...; Region: FNR_like; cl06868" /db_xref="CDD:195401" misc_feature order(400217..400219,400253..400264,400313..400321, 400334..400345,400460..400462) /locus_tag="Acear_0367" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99778" misc_feature order(400253..400255,400259..400264) /locus_tag="Acear_0367" /note="conserved FAD binding motif [chemical binding]; other site" /db_xref="CDD:99778" misc_feature order(400334..400336,400343..400345,400352..400354, 400373..400375) /locus_tag="Acear_0367" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99778" misc_feature order(400445..400447,400457..400468,400472..400474) /locus_tag="Acear_0367" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99778" misc_feature order(400460..400465,400538..400546,400739..400744) /locus_tag="Acear_0367" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99778" gene 400971..401291 /locus_tag="Acear_0368" /db_xref="GeneID:9512373" CDS 400971..401291 /locus_tag="Acear_0368" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826980.1" /db_xref="GI:302391160" /db_xref="GeneID:9512373" /translation="MKKRLSLLVLLLITLIIISGCNGKGNLKVVVYDQQQNPVNDVYV GIYKSDFNQRLRFAYTRRGEVEFAGLESGVYYIRIISPGQKKEMKLRINNQEDRYLKV NLNN" gene 401304..402407 /locus_tag="Acear_0369" /db_xref="GeneID:9512374" CDS 401304..402407 /locus_tag="Acear_0369" /note="COGs: COG4784 Putative Zn-dependent protease; InterPro IPR001915; KEGG: wsu:WS1322 hypothetical protein; PFAM: peptidase M48 Ste24p; SPTR: Q7MRI5 Putative uncharacterized protein; PFAM: peptidase family M48" /codon_start=1 /transl_table=11 /product="peptidase M48 Ste24p" /protein_id="YP_003826981.1" /db_xref="GI:302391161" /db_xref="GeneID:9512374" /translation="MIGLRKKRIVILLLISFLVLGSISVQAVSDYEKKISQKYLKHYL DEYGKADLNSEEKKRVDEIFNKLAAEADKDAPDLEFKYHIIDNSAINAVNIGDGYILI YKGLFDLLETDEQLAALIAHEMGHGVNNDIQEKIEINQKIQLGAVIFDLAKDGKLDQD EVSPAAEIAVNLLVKKYSRSQEKEADIYSALLLKRTDYDSRGVIGLLRLLKRKSNSVN LELLELMKSHPNLDTRIDYVAEAIKKQKEAEKLYHSPVSTSRELTAGLFRDNLNQVYS AYAERIHANLTREQFKDEEQIEKVRKEIANLKEKYNFKYTLELRNQVEGTARVAISFY RNEFTQQNQLVSFAVDLIKDKYGWKVLRGPVAY" misc_feature 401478..402008 /locus_tag="Acear_0369" /note="Peptidase family M48; Region: Peptidase_M48; cl12018" /db_xref="CDD:187163" gene complement(402458..404167) /locus_tag="Acear_0370" /db_xref="GeneID:9512375" CDS complement(402458..404167) /locus_tag="Acear_0370" /EC_number="6.1.1.15" /note="COGs: COG0442 Prolyl-tRNA synthetase; InterProIPR004154:IPR002316:IPR006195:IPR007214:IPR 004500:IPR002314; KEGG: hor:Hore_07770 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; PRIAM: Proline--tRNA ligase; SPTR: B8CW65 Prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II" /codon_start=1 /transl_table=11 /product="prolyl-tRNA synthetase" /protein_id="YP_003826982.1" /db_xref="GI:302391162" /db_xref="GeneID:9512375" /translation="MKMSQMYSPTLKETPADAEVVSHQLMLRAGLMRKLGSGIYSHLP LGYKVIQKVEDIIREEMNKAGAQEVLLPALQPAELWKESNRWADYGPELMRLEDRHKR DFCLGPTHEEVITDLIKDEVRSYKDLPFNLYQIQTKFRDEIRPRFGVLRSREFIMKDA YSFNPDKESLDESYEKMYDSYVEIFDRCGLDFRTVVADNGPIGGTDSHEFMVLADSGE DTVVFCSECDYSANLELADSDIEFTTTDDKPQELEKVETPGADTIEDLAEFFNCSTKK LLKSLIYQTQDGYVLALVRGDYQLNEVKLRNFLGTAALEMAPAEELFNDTGIVTGFAG PVDIPDEVRVIADPSAMAVVNGVTGANEADYHYTNVNPERDFTVDAIVDIREIKEGEP CIDCGAELTMTRGIEVGQVFKLGTKYSDSMKATYIDDNGKSQSIFMGCYGIGVTRTVA AAIEQNHDDYGIIWPKSIAPYSVHIMQLGNDEEIKRVSEDLYTALNQTGLEALYDDRS ERAGVKFNDADLIGCPIQVIIGKNSLEDNKLEIKLRQTDEKLKINADNPVPKIKELLA KQN" misc_feature complement(402470..404167) /locus_tag="Acear_0370" /note="prolyl-tRNA synthetase; Provisional; Region: PRK09194" /db_xref="CDD:181689" misc_feature complement(<403523..404119) /locus_tag="Acear_0370" /note="Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation...; Region: ProRS_core_prok; cd00779" /db_xref="CDD:73229" misc_feature complement(order(403706..403708,403757..403759, 403817..403819,403871..403885,403889..403891, 403949..403954,403958..403966,404015..404017, 404036..404047,404066..404071)) /locus_tag="Acear_0370" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73229" misc_feature complement(403949..403972) /locus_tag="Acear_0370" /note="motif 1; other site" /db_xref="CDD:73229" misc_feature complement(order(403691..403693,403697..403699, 403703..403705,403712..403720,403742..403744, 403748..403750,403835..403837,403841..403843)) /locus_tag="Acear_0370" /note="active site" /db_xref="CDD:73229" misc_feature complement(403742..403753) /locus_tag="Acear_0370" /note="motif 2; other site" /db_xref="CDD:73229" misc_feature complement(403016..403492) /locus_tag="Acear_0370" /note="INS is an amino acid-editing domain inserted (INS) into the bacterial class II prolyl-tRNA synthetase (ProRS) however, this CD is not exclusively bacterial. It is also found at the N-terminus of the eukaryotic/archaea-like ProRS's of yeasts and single-...; Region: ProRS-INS; cd04334" /db_xref="CDD:88585" misc_feature complement(order(403091..403093,403172..403177, 403331..403333)) /locus_tag="Acear_0370" /note="putative deacylase active site [active]" /db_xref="CDD:88585" misc_feature complement(402803..>402976) /locus_tag="Acear_0370" /note="Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it...; Region: class_II_aaRS-like_core; cl00268" /db_xref="CDD:193739" misc_feature complement(order(402827..402829,402836..402841, 402845..402850,402938..402940,402950..402955)) /locus_tag="Acear_0370" /note="active site" /db_xref="CDD:29813" misc_feature complement(order(402827..402829,402836..402838)) /locus_tag="Acear_0370" /note="motif 3; other site" /db_xref="CDD:29813" misc_feature complement(402482..402760) /locus_tag="Acear_0370" /note="ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-...; Region: ProRS_anticodon_short; cd00861" /db_xref="CDD:29801" misc_feature complement(order(402542..402544,402548..402550, 402578..402580,402602..402604,402620..402622, 402731..402736)) /locus_tag="Acear_0370" /note="anticodon binding site; other site" /db_xref="CDD:29801" gene 404932..405357 /locus_tag="Acear_0371" /db_xref="GeneID:9512376" CDS 404932..405357 /locus_tag="Acear_0371" /note="COGs: COG0824 thioesterase; InterPro IPR006684:IPR006683; KEGG: tte:TTE1814 thioesterase; PFAM: thioesterase superfamily protein; SPTR: C6PDX6 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: conserved hypothetical protein TIGR00051; tol-pal system-associated acyl-CoA thioesterase" /codon_start=1 /transl_table=11 /product="thioesterase superfamily protein" /protein_id="YP_003826983.1" /db_xref="GI:302391163" /db_xref="GeneID:9512376" /translation="MSEHSHQIRVTYQETDKMGVVYYANYLRWFEIGRTEYMRQAGVT YKELEDEGVFLPVLESHCKYHNPARYDDLIRIETTINKLKRVRIGFSYEILHSESDEL LAAGNTSHSFVNQDFEPISLQREKPEVWQLIQRSFDKKK" misc_feature 404941..405273 /locus_tag="Acear_0371" /note="4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active...; Region: 4HBT; cd00586" /db_xref="CDD:48031" misc_feature order(405022..405024,405094..405096,405100..405102, 405181..405192) /locus_tag="Acear_0371" /note="active site" /db_xref="CDD:48031" gene 405398..406225 /locus_tag="Acear_0372" /db_xref="GeneID:9512377" CDS 405398..406225 /locus_tag="Acear_0372" /EC_number="3.2.2.23" /note="COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterProIPR015887:IPR000214:IPR012319:IPR010979:IPR 000191:IPR015886:IPR010663; KEGG: hor:Hore_04870 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; zinc finger Fpg domain protein; PRIAM: DNA-formamidopyrimidine glycosylase; SPTR: B8D218 DNA glycosylase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)" /codon_start=1 /transl_table=11 /product="formamidopyrimidine-DNA glycosylase" /protein_id="YP_003826984.1" /db_xref="GI:302391164" /db_xref="GeneID:9512377" /translation="MPELPEVQTVVDTLTESVLKKEITDVEVKNEKLIANLEVEEFID TLTGSRIEDIRRRGKYIIMELDTDYYLVTHLRMTGRFVYCQKKEEVDKYDYIFFKFKG NDELRLGSKRKFTRTYLVADLKEAGSLTKLGPEPLSDEFTLDKFKEILSTRRGRIKPL LLNQKFLAGLGNIYVDEALFISQIHPLRTADTLTDQEIKKLYQAIQQVLAEGIEHRGT TKWDYVDASGEAGSYQNYLRVYDRKGEECNRCAAILKKIKVGGRGTYFCPQCQEQEE" misc_feature 405398..406210 /locus_tag="Acear_0372" /note="formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase; Validated; Region: PRK01103" /db_xref="CDD:179222" misc_feature 405401..405739 /locus_tag="Acear_0372" /note="N-terminal domain of Escherichia coli Fpg1/MutM and related bacterial DNA glycosylases; Region: EcFpg-like_N; cd08966" /db_xref="CDD:176800" misc_feature order(405401..405406,405572..405574,405617..405619, 405623..405631,405671..405676,405728..405739) /locus_tag="Acear_0372" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:176800" misc_feature 405401..405403 /locus_tag="Acear_0372" /note="catalytic residue [active]" /db_xref="CDD:176800" misc_feature order(405404..405415,405419..405424,405431..405433, 405563..405574,405629..405631) /locus_tag="Acear_0372" /note="H2TH interface [polypeptide binding]; other site" /db_xref="CDD:176800" misc_feature order(405404..405406,405572..405574) /locus_tag="Acear_0372" /note="putative catalytic residues [active]" /db_xref="CDD:176800" misc_feature 405617..405619 /locus_tag="Acear_0372" /note="turnover-facilitating residue; other site" /db_xref="CDD:176800" misc_feature order(405626..405628,405731..405733,405737..405739) /locus_tag="Acear_0372" /note="intercalation triad [nucleotide binding]; other site" /db_xref="CDD:176800" misc_feature 405629..405631 /locus_tag="Acear_0372" /note="8OG recognition residue [nucleotide binding]; other site" /db_xref="CDD:176800" misc_feature order(405674..405676,405734..405736) /locus_tag="Acear_0372" /note="putative reading head residues; other site" /db_xref="CDD:176800" misc_feature 405791..406069 /locus_tag="Acear_0372" /note="Formamidopyrimidine-DNA glycosylase H2TH domain; Region: H2TH; pfam06831" /db_xref="CDD:115485" misc_feature 406127..406213 /locus_tag="Acear_0372" /note="Zinc finger found in FPG and IleRS; Region: zf-FPG_IleRS; pfam06827" /db_xref="CDD:148438" gene 406228..408102 /locus_tag="Acear_0373" /db_xref="GeneID:9512378" CDS 406228..408102 /locus_tag="Acear_0373" /note="COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR017871:IPR003439:IPR003593; KEGG: hor:Hore_14070 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C6J8N9 Putative uncharacterized protein; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003826985.1" /db_xref="GI:302391165" /db_xref="GeneID:9512378" /translation="MALLQLQNATKIYPEQIIFKDISLQIQPDDRIGLIGDNGTGKST LIEVLREEEYLDEGELLTSNDLDIGYLAQSYNLNPDTTLYQEMLNIYQGLFQLEEKLQ NLEAEMSQVSGKKLDKIMERYSKLRREYEASGGYRYESEIKGVLRGLGFTEDEFDEEL TNFSGGEKTRAGLAKLLLSQPQLLLLDEPTNHLDLQAKEWLEDYLIDYDGAVVIISHD RYFLNQVVDCIWELEKGRLEKYNGDYSFYAEEKEHRLLTWQREYEKQQKKIKKMKAYI RKNKAGVDSKQARGRQKKLDRMERIPPPPTIDTPKIDFRLETVSGNDVLTVEGLSKSY DQELVLEDIDFKLYRGEKVALVGPNGSGKSTLFKLLSEQEEVDRGEIKLGTRVNIGYY DQEHKDLTLGHNLIEELQEAADITKSSARDVLARFLFKGDDVFKEISTLSGGEKARLS LAKLAIQDYNLLLLDEPTNHLDIKSKEILEEALQNYPGTILVISHDRYFLDELVDKVF ALEGNKLVEYRGNYTDYRIEYEERLAAEKEAKQKAEVKTGDKGQEKNNSPSQESEIDL DELEAEIIELEDRLEELETAFNSQNLYNDEEELADLTTEYETIKEKLEEYYELWEEAI " misc_feature 406228..407805 /locus_tag="Acear_0373" /note="ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]; Region: Uup; COG0488" /db_xref="CDD:30834" misc_feature 406237..>406446 /locus_tag="Acear_0373" /note="ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by...; Region: ABCF_EF-3; cd03221" /db_xref="CDD:72980" misc_feature <406705..406935 /locus_tag="Acear_0373" /note="ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by...; Region: ABCF_EF-3; cd03221" /db_xref="CDD:72980" misc_feature 406915..407127 /locus_tag="Acear_0373" /note="ABC transporter; Region: ABC_tran_2; pfam12848" /db_xref="CDD:193322" misc_feature 407200..407769 /locus_tag="Acear_0373" /note="ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by...; Region: ABCF_EF-3; cd03221" /db_xref="CDD:72980" gene 408245..408934 /locus_tag="Acear_0374" /db_xref="GeneID:9512379" CDS 408245..408934 /locus_tag="Acear_0374" /note="COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: hor:Hore_23250 ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8D1B8 ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="peptide ABC transporter ATPase" /protein_id="YP_003826986.1" /db_xref="GI:302391166" /db_xref="GeneID:9512379" /translation="MSLLELKEVEKIYRQSKVEVPALRGVDLTIEEGGFVSIAGPSGS GKTTLLNLVGCLDTPTEGQITFGGEEISRLSQDELAMLRRHNFGFIFQDFNLIPVLTA YENVEFALKLINNQEQAKINQRVMEILTAVGLGDLADRQPNELSGGQKQRVSIARALV KEPKLVLADEPTANLDSETSQDVLKVMVEMNKKLDTTFIFSTHDPLVMDYAQRLIKLR DGEIVKDEMIN" misc_feature 408251..408925 /locus_tag="Acear_0374" /note="ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]; Region: SalX; COG1136" /db_xref="CDD:31331" misc_feature 408254..408910 /locus_tag="Acear_0374" /note="This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together...; Region: ABC_MJ0796_Lo1CDE_FtsE; cd03255" /db_xref="CDD:73014" misc_feature 408362..408385 /locus_tag="Acear_0374" /note="Walker A/P-loop; other site" /db_xref="CDD:73014" misc_feature order(408371..408376,408380..408388,408518..408520, 408749..408754,408851..408853) /locus_tag="Acear_0374" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73014" misc_feature 408509..408520 /locus_tag="Acear_0374" /note="Q-loop/lid; other site" /db_xref="CDD:73014" misc_feature 408677..408706 /locus_tag="Acear_0374" /note="ABC transporter signature motif; other site" /db_xref="CDD:73014" misc_feature 408737..408754 /locus_tag="Acear_0374" /note="Walker B; other site" /db_xref="CDD:73014" misc_feature 408761..408772 /locus_tag="Acear_0374" /note="D-loop; other site" /db_xref="CDD:73014" misc_feature 408839..408859 /locus_tag="Acear_0374" /note="H-loop/switch region; other site" /db_xref="CDD:73014" gene 408946..410202 /locus_tag="Acear_0375" /db_xref="GeneID:9512380" CDS 408946..410202 /locus_tag="Acear_0375" /note="COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: hor:Hore_23240 ABC-type transport system, involved in lipoprotein release, permease component; PFAM: protein of unknown function DUF214; SPTR: B8D1B7 ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826987.1" /db_xref="GI:302391167" /db_xref="GeneID:9512380" /translation="MWEVLLIFFIRLALKNLTRHKRRVLVTASIIALGIAIFLIYDSI QIGINELSFNNIKNLETGDLQVVNKDYWTKREELSLRNLIHQEQDLLQIIRKTPYFEA LSSQLKFSANLNNGTDELPVVACGIDPYQHKKVFTTEDYLVEGRMLENGRYEAVLGKK LADLMELKIGDYLTLLFRTPQDTFNTIDVEIVGLVHTNNPDVNNNLVYLPLETAQQAL NLNNRVSQIVVKLNYDGKAVEAAEELSTELTNYNQKLTAHSWRDSAGEVIAMSKVETI EKLIMMSAILLIAAVGIVNTIILSSLERTKEIGMMKALGLKEREIVLTFIGEAIGIGL IGGFIGSLIGIIAIFYLNTQGLDLSVFGGVEDWGLPIMSKLYGHWNPPAFLFVNAFGI IVSFLASILPARWAARKDPVEAIYDR" misc_feature 408961..410190 /locus_tag="Acear_0375" /note="ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]; Region: LolE; COG4591" /db_xref="CDD:34229" misc_feature 409105..409674 /locus_tag="Acear_0375" /note="MacB-like periplasmic core domain; Region: MacB_PCD; pfam12704" /db_xref="CDD:193180" misc_feature 409780..410178 /locus_tag="Acear_0375" /note="FtsX-like permease family; Region: FtsX; pfam02687" /db_xref="CDD:190390" gene 410217..411482 /locus_tag="Acear_0376" /db_xref="GeneID:9512381" CDS 410217..411482 /locus_tag="Acear_0376" /note="COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: hor:Hore_23230 ABC-type transport system, involved in lipoprotein release, permease component; PFAM: protein of unknown function DUF214; SPTR: B8D1B6 ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826988.1" /db_xref="GI:302391168" /db_xref="GeneID:9512381" /translation="MSFLWNLASKNLFRNKLRTSISILAIALSVALVVFVKGLVVGMI DNMFSLHIQYEAGHAKIINQEYQQKERLLSLNYPVDGFNGAGITNMEQKLTEIEGVKR VIPRIKFGASVIQDQEDNLVRLMGWGVQPKKELEFTNIGEKLTAGRMIKPGRKEVILG KDLLQKLDLDVGEKVTFLYQTSFGSFKGSTFKIVGQIASSLKLLDEKVFYLSLDQTQR ILEMSDMATELLLETNNYRKIDQILPKVNELFEQEGAEEYQLISWNRGYDMINMLQIA QRIYNFIYIFLVILAGIVVVNTMIMIVKERTKEIGMMTALGLKQREILIMFIMEGTVM GIVGSLVGVVIGGAITKITAVTEIIDYSAAMSGVSENILINPVVRPVVSGETLLYSFI LGVVITALTCIIPARRAAKLEPADALRSN" misc_feature 410487..411476 /locus_tag="Acear_0376" /note="ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]; Region: LolE; COG4591" /db_xref="CDD:34229" misc_feature 411057..411458 /locus_tag="Acear_0376" /note="FtsX-like permease family; Region: FtsX; pfam02687" /db_xref="CDD:190390" gene 411560..411736 /locus_tag="Acear_0377" /db_xref="GeneID:9512382" CDS 411560..411736 /locus_tag="Acear_0377" /note="KEGG: dae:Dtox_3521 hypothetical protein; SPTR: C1TC01 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826989.1" /db_xref="GI:302391169" /db_xref="GeneID:9512382" /translation="MIQQIKRTKEGAIPTALGTVVTGLGIGMRSVNPALGWGIAGFGL AHVLLGAIDLVEHQ" gene complement(412040..413341) /locus_tag="Acear_0378" /db_xref="GeneID:9512383" CDS complement(412040..413341) /locus_tag="Acear_0378" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: tex:Teth514_2350 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003826990.1" /db_xref="GI:302391170" /db_xref="GeneID:9512383" /translation="MKLAKHFIHKPNQTQQIVLGCLAYASARLYNIGNYQRKDWSKDS AKNYPDWYKQKKQLKDNFWYKNLPSQTAQETLKILADNWDSFYQSMEDYQDNPDKYNG KPNSPNYKPKDSKFNFRYLNNGFKIIDGKLRLSIPKQLKEYLKEEYSITNKFLWIRVP NELLSSNRDILNSTTRIEFKPLSDDTYKVILTYKVDTPTIKEDDGNYLSIDLGINNLM TCYSNQNQESFIIDGGQYLAINRYFDKKIKHYQSILNGQGKKTSKRIQNLYKKRRKQL FHLIHSATKKVVNYCVENNISRVIVGDIKNIRDDADLGKQNNQKLHKLPFDIIYHQLE YKLNLQGITLIKKSEKYTSQCSPYSKKVTKKYANKSNRVKRGLYIDKDNNQAFNADSI GAFNILRKYLQQRRKGPDITLQVKGLSNPVKYNWNNHQFAA" misc_feature complement(412418..413155) /locus_tag="Acear_0378" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature complement(412283..412528) /locus_tag="Acear_0378" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature complement(412142..412366) /locus_tag="Acear_0378" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene complement(413619..413837) /locus_tag="Acear_0379" /db_xref="GeneID:9512384" CDS complement(413619..413837) /locus_tag="Acear_0379" /note="InterPro IPR010652; KEGG: pma:Pro0579 hypothetical protein; PFAM: protein of unknown function DUF1232; SPTR: C1QE95 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1232)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826991.1" /db_xref="GI:302391171" /db_xref="GeneID:9512384" /translation="MDKKSSKINFLDKVKLFVAMLRDHSNQDFYIDDGTLGSIIACLA YLVLPTDLVPDFIPVAGFTDDAAAFMLG" misc_feature complement(413625..413735) /locus_tag="Acear_0379" /note="Protein of unknown function (DUF1232); Region: DUF1232; cl01318" /db_xref="CDD:194100" gene 414136..414297 /locus_tag="Acear_0380" /db_xref="GeneID:9512385" CDS 414136..414297 /locus_tag="Acear_0380" /note="COGs: COG1773 rubredoxin; InterPro IPR004039:IPR018527:IPR001052; KEGG: hor:Hore_22490 rubredoxin-type Fe(Cys)4 protein; PFAM: rubredoxin-type Fe(Cys)4 protein; SPTR: B8D0Q8 rubredoxin; PFAM: rubredoxin" /codon_start=1 /transl_table=11 /product="rubredoxin-type Fe(Cys)4 protein" /protein_id="YP_003826992.1" /db_xref="GI:302391172" /db_xref="GeneID:9512385" /translation="MDKYRCEVCGYVYDPEEGDSNAGIEAGTSFEDLPEDWVCPLCGV GKDQFVKEE" misc_feature 414142..414288 /locus_tag="Acear_0380" /note="Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center. Rubredoxins are small nonheme iron proteins. The iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc. They...; Region: rubredoxin; cd00730" /db_xref="CDD:29433" misc_feature 414142..414282 /locus_tag="Acear_0380" /note="Rubredoxin; Region: Rubredoxin; pfam00301" /db_xref="CDD:189494" misc_feature order(414151..414153,414160..414162,414250..414252, 414259..414261) /locus_tag="Acear_0380" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29433" gene 414380..415540 /locus_tag="Acear_0381" /db_xref="GeneID:9512386" CDS 414380..415540 /locus_tag="Acear_0381" /note="COGs: COG0426 flavoprotein; InterPro IPR008254:IPR016440; KEGG: hmo:HM1_0548 rubredoxin-oxygen oxidoreductase, PFAM: flavodoxin/nitric oxide synthase; SPTR: B0TG05 rubredoxin-oxygen oxidoreductase, PFAM: Flavodoxin; Metallo-beta-lactamase superfamily" /codon_start=1 /transl_table=11 /product="flavodoxin/nitric oxide synthase" /protein_id="YP_003826993.1" /db_xref="GI:302391173" /db_xref="GeneID:9512386" /translation="MQPIEIKENIYWVGGIDWNLRNFHGYSTDRGSTYNAYLIIDDQI TLVDTVKSNLYDEMIERISKVIDPAEIDYIVSNHVEMDHSGGLPELMEVVEDATVITS PKGEEGLKLHYDGDWDFKAVNPGESLDLGTKSLEFVLTPMVHWPDNMVTYLPEDKILF SNDAFGQHYASSERFDDQTPYDIIMEEAKKYYANIVLPYSSQVQNVLGTVGDLEIETI APSHGIIWRSNIGEIIQKYKKWSANETEEEAVIIYDTMWESTAKIASGIQKAFEAKGI NTKMKKLGVNHISDVMTDVMTAKYICVGSPTLNNNMLPEVAAFLTYLKGLAPKDRIGL AFGSYGWGGQSVSQVADVLEECGFELLGQIKEQYIPDNLEGITKEVKELLRG" misc_feature 414395..415492 /locus_tag="Acear_0381" /note="metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional; Region: PRK11921" /db_xref="CDD:183382" misc_feature 414467..415045 /locus_tag="Acear_0381" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" misc_feature 415130..415501 /locus_tag="Acear_0381" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:193819" gene 415777..416241 /locus_tag="Acear_0382" /db_xref="GeneID:9512387" CDS 415777..416241 /locus_tag="Acear_0382" /note="KEGG: cbi:CLJ_B1481 hypothetical protein; SPTR: C3KUN3 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003826994.1" /db_xref="GI:302391174" /db_xref="GeneID:9512387" /translation="MKKHIKSKLTNLVVWFEAILSIFILIAILIGFIDLIKYFRIIFS LAPQNSYKYFQNFLSYILLLVIGLEMIIMLIRHTPGSVIEVLIFGIARKLLIHSDNMI DIVLGIVALAGLFGIKKYLFENKEGNFIKPENEFIMKEENEFIMKEKINKEN" gene 416373..416576 /locus_tag="Acear_0383" /db_xref="GeneID:9512388" CDS 416373..416576 /locus_tag="Acear_0383" /note="COGs: COG1278 Cold shock protein; InterProIPR012340:IPR019844:IPR002059:IPR016027:IPR 011129:IPR012156; KEGG: hor:Hore_16470 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B8CYM7 Putative cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain" /codon_start=1 /transl_table=11 /product="cold-shock DNA-binding protein family" /protein_id="YP_003826995.1" /db_xref="GI:302391175" /db_xref="GeneID:9512388" /translation="MILSGTVKWFDTKKGYGFIESEEGEDVFVHYSAIDEDGFKTLED GQEVEFEIVEGDKGPQAENVVKI" misc_feature 416385..416570 /locus_tag="Acear_0383" /note="Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein...; Region: CSP_CDS; cd04458" /db_xref="CDD:88424" misc_feature order(416397..416399,416424..416426,416454..416456, 416541..416543) /locus_tag="Acear_0383" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:88424" misc_feature order(416415..416435,416451..416462) /locus_tag="Acear_0383" /note="RNA-binding motif; other site" /db_xref="CDD:88424" gene 416749..417246 /locus_tag="Acear_0384" /db_xref="GeneID:9512389" CDS 416749..417246 /locus_tag="Acear_0384" /note="COGs: COG3773 Cell wall hydrolyses involved in spore germination; InterPro IPR011105; KEGG: tte:TTE2551 spore cortex-lytic enzyme prepeptide; PFAM: cell wall hydrolase SleB; SPTR: Q8R773 spore cortex-lytic enzyme prepeptide; PFAM: Cell Wall Hydrolase" /codon_start=1 /transl_table=11 /product="cell wall hydrolase SleB" /protein_id="YP_003826996.1" /db_xref="GI:302391176" /db_xref="GeneID:9512389" /translation="MKKIATVLIIVLLLGVGGWLARGWMTDRQLQQQVEPVQTRWAPN FWSLSPNTRLMARTISAEARGETYLGQVAVGSVIMNRVRSDKFPNSISGVIYQPWAFT AVARGHVWDHTPESDSIRAALDAMSGWDPTYGSIYYYNPADVTTYWIFSRPQVRQIGK HIFAR" misc_feature 416938..417243 /locus_tag="Acear_0384" /note="Cell Wall Hydrolase; Region: Hydrolase_2; pfam07486" /db_xref="CDD:191754" gene 417291..418640 /locus_tag="Acear_0385" /db_xref="GeneID:9512390" CDS 417291..418640 /locus_tag="Acear_0385" /note="InterPro IPR005075; KEGG: bha:BH1632 hypothetical protein; PFAM: Propeptide PepSY amd peptidase M4; SPTR: Q9RC82 sporulation protein ypeB; PFAM: peptidase propeptide and YPEB domain; TIGRFAM: germination protein YpeB" /codon_start=1 /transl_table=11 /product="Propeptide PepSY amd peptidase M4" /protein_id="YP_003826997.1" /db_xref="GI:302391177" /db_xref="GeneID:9512390" /translation="MRRNAIIFILVIALAAVGYWGFKNNKILAKWELQTENQYRNAFA ELNNNLNSLEDELATALVTKSNERRSVKLNNIWRDAFAAQKDLGELPIAGISLTKFKD LLAKIESYTYQLSQDNINEDLSAEDWDNLNQLHSQVQTVAKEMKDIHNKIEKEGFRWS EQRHIILEKEDLEENSILSSLQGLEGEVSKINLNPDNESIKDGLPEKLNLQLGEVEND QEDKVESKEAVDVAQEFIGARSKEFNFRVAKDERDPEAKSITTVVANSKDLDDNRIHF DINQNSGDIIWFLEQRPFKDPDLEEEEIKKEARNFIKEVDYEENLALKEVNSQRNIGL VTFVPKIKEVLFYPQPVRVKVALDNGDIMGLNNRAFLVNRNLSEEMDLEPGLSLEEAE EKVNKRLKLVSNDLAVIKNDQGKPVLSYEFIGEFKKERYRVNINADTGREERVEKAS" misc_feature 417342..418631 /locus_tag="Acear_0385" /note="germination protein YpeB; Region: spore_YpeB; TIGR02889" /db_xref="CDD:131935" misc_feature 418446..418628 /locus_tag="Acear_0385" /note="Peptidase propeptide and YPEB domain; Region: PepSY; pfam03413" /db_xref="CDD:190629" gene 418801..418877 /locus_tag="Acear_R0033" /db_xref="GeneID:9512391" tRNA 418801..418877 /locus_tag="Acear_R0033" /product="tRNA-Cys" /db_xref="GeneID:9512391" gene 418884..418973 /locus_tag="Acear_R0034" /db_xref="GeneID:9512392" tRNA 418884..418973 /locus_tag="Acear_R0034" /product="tRNA-Leu" /db_xref="GeneID:9512392" gene 418981..419055 /locus_tag="Acear_R0035" /db_xref="GeneID:9512393" tRNA 418981..419055 /locus_tag="Acear_R0035" /product="tRNA-Val" /db_xref="GeneID:9512393" gene 419227..419643 /locus_tag="Acear_0386" /db_xref="GeneID:9512394" CDS 419227..419643 /locus_tag="Acear_0386" /note="COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148; KEGG: hor:Hore_11690 TrkA-N domain protein; PFAM: TrkA-N domain protein; SPTR: B8CXA0 TrkA-N domain protein; PFAM: TrkA-N domain" /codon_start=1 /transl_table=11 /product="TrkA-N domain protein" /protein_id="YP_003826998.1" /db_xref="GI:302391178" /db_xref="GeneID:9512394" /translation="MKEIIIIGVGRFGLSVAKELFKKGYEILAVDKDETRVQKVANYA TYAVQADFTNEDIMERFEIDKFDIGIVGIGKSLYDNLVTTFVLNKFNVSHIVVKAKDK LQGELLKEIGADKVVYPERDIGIKMVEELNNRVLEY" misc_feature 419236..419583 /locus_tag="Acear_0386" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene 420024..421943 /locus_tag="Acear_0387" /db_xref="GeneID:9512395" CDS 420024..421943 /locus_tag="Acear_0387" /EC_number="3.1.1.-" /EC_number="6.1.1.3" /note="COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR012675:IPR004154:IPR018158:IPR006195:IPR 018163:IPR012676:IPR002320:IPR004095:IPR012947:IPR002314; KEGG: amt:Amet_1631 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain protein; Anticodon-binding domain protein; SPTR: A6TNP0 Threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase" /protein_id="YP_003826999.1" /db_xref="GI:302391179" /db_xref="GeneID:9512395" /translation="MNQVDITLPDGSVLEFDEEVTVREVAFEIGPRLGKATIAGKVDS KEVDADYVINDDVELEIITIDSEEGLEIYRHSMAHIMAQAVERIYGSDEVQLAIGPSI EDGFYYDFDIPENFSDNDLEEIEAEMQEIIEEDLEIERIELSKKEAVEKMKDLGEDYK VEMLEELEDDAVSFYQQGDFIDLCRGPHLTSTGKANAEGFKLLNVAGAYWRGDEDNKM LQRIYGTAFPNKSDLEEHLDRLEEAKKRDHRKLGQKLDLFSLHDEGKGFPFFHPKGMV VRNELIDFWKEEHRQAGYKEIKTPVILNQDLWKQSGHWDHYKEDMYFTEIDKEPHAVK PMNCPGGILVYKDKMRSYRDLPIRMGELGLVHRHERSGTLHGLMRVRNFTQDDAHIFC LPSQIEEELTGVIKLVDRIYAPFGFNYRVELSTKPDKAMGSDELWDKATDALREAIEA NDLDYKVNEGDGAFYGPKIDFHLEDCLGRTWQCGTVQLDFQMPERFDLTYVGQDGEEH RPVMIHRAIFGSLERFMGILIEHYAGAFPTWLAPIQTEVIPVTDDHLDYAYQVKEELA DAGVRVEVDARQEKVGYKIREAQVQQVPYMLIVGDDEIEDKTVSVRDRREGDLGAKDL AEFKAEIVKEIENRA" misc_feature 420030..421937 /locus_tag="Acear_0387" /note="threonyl-tRNA synthetase; Reviewed; Region: thrS; PRK00413" /db_xref="CDD:179011" misc_feature 420033..420215 /locus_tag="Acear_0387" /note="TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is a class II tRNA synthetase that couples threonine to its cognate tRNA. In addition to its catalytic and anticodon-binding domains, ThrRS has an N-terminal TGS domain, named after the ThrRS, GTPase...; Region: TGS_ThrRS_N; cd01667" /db_xref="CDD:133437" misc_feature 420537..420692 /locus_tag="Acear_0387" /note="Threonyl and Alanyl tRNA synthetase second additional domain; Region: tRNA_SAD; cl08469" /db_xref="CDD:158351" misc_feature 420762..421649 /locus_tag="Acear_0387" /note="Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain. ThrRS is a homodimer. It is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent...; Region: ThrRS_core; cd00771" /db_xref="CDD:29816" misc_feature order(420771..420773,420810..420812,420960..420962, 420972..420974,420981..420986,421026..421028, 421122..421124,421128..421130,421134..421142, 421155..421163,421170..421172,421176..421178, 421458..421460,421467..421472,421482..421484, 421578..421583,421590..421592) /locus_tag="Acear_0387" /note="active site" /db_xref="CDD:29816" misc_feature order(420783..420785,420801..420803,420807..420812, 420816..420818,420822..420824,420828..420833, 420837..420839,420846..420848,420891..420896, 420906..420911,420915..420917,420921..420929, 420933..420935,420987..420995,420999..421010, 421014..421016,421050..421055,421062..421070, 421074..421082,421119..421121,421125..421127, 421134..421136,421164..421169,421248..421250, 421371..421379,421524..421526,421530..421532) /locus_tag="Acear_0387" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29816" misc_feature 420906..420929 /locus_tag="Acear_0387" /note="motif 1; other site" /db_xref="CDD:29816" misc_feature 421119..421130 /locus_tag="Acear_0387" /note="motif 2; other site" /db_xref="CDD:29816" misc_feature 421578..421592 /locus_tag="Acear_0387" /note="motif 3; other site" /db_xref="CDD:29816" misc_feature 421647..421919 /locus_tag="Acear_0387" /note="ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is...; Region: ThrRS_anticodon; cd00860" /db_xref="CDD:29800" misc_feature order(421671..421676,421779..421781,421797..421799, 421821..421823,421851..421853,421857..421859) /locus_tag="Acear_0387" /note="anticodon binding site; other site" /db_xref="CDD:29800" gene 422209..422733 /locus_tag="Acear_0388" /db_xref="GeneID:9512396" CDS 422209..422733 /locus_tag="Acear_0388" /note="COGs: COG0290 translation initiation factor 3 (IF-3); InterPro IPR019814:IPR019815:IPR019813:IPR001288; KEGG: fma:FMG_0695 translation initiation factor IF-3; PFAM: translation initiation factor 3-like; SPTR: B0S173 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: translation initiation factor IF-3, C-terminal domain; translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3" /codon_start=1 /transl_table=11 /product="bacterial translation initiation factor 3 (bIF-3)" /protein_id="YP_003827000.1" /db_xref="GI:302391180" /db_xref="GeneID:9512396" /translation="MISNDDLRVNEKIRAREIRVVDNEGDQIGIMPLKKGLDIAKDRG LDLVEVAPNAEPPVCRILDYGKYKYEQAKKAQKAKQNQNVMNVKEVQMSVKIEEHDFN VKVNMGERFLKNKDKVKVKIKFRGREITHKDLGYDLMEDYYSELEDLAKMETKPKMEG RNMLMILTPISDKN" misc_feature 422209..422727 /locus_tag="Acear_0388" /note="translation initiation factor IF-3; Reviewed; Region: infC; PRK00028" /db_xref="CDD:178804" misc_feature 422218..>422397 /locus_tag="Acear_0388" /note="Translation initiation factor IF-3, N-terminal domain; Region: IF3_N; pfam05198" /db_xref="CDD:191228" misc_feature 422458..422718 /locus_tag="Acear_0388" /note="Translation initiation factor IF-3, C-terminal domain; Region: IF3_C; pfam00707" /db_xref="CDD:189681" gene 422749..422946 /locus_tag="Acear_0389" /db_xref="GeneID:9512397" CDS 422749..422946 /locus_tag="Acear_0389" /note="InterPro IPR018265:IPR001706; KEGG: nth:Nther_1822 50S ribosomal protein L35P; PFAM: ribosomal protein L35; SPTR: B2A5P0 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L35P" /protein_id="YP_003827001.1" /db_xref="GI:302391181" /db_xref="GeneID:9512397" /translation="MPKMKTHKGAKKRFKKTSKGKYKRKRTKRNHLMTKKNSNKKRKL RKDATVKKCDEDTLDTLMPND" gene 422983..423336 /locus_tag="Acear_0390" /db_xref="GeneID:9512398" CDS 422983..423336 /locus_tag="Acear_0390" /note="COGs: COG0292 Ribosomal protein L20; InterPro IPR005813; KEGG: hor:Hore_05610 ribosomal protein L20; PFAM: ribosomal protein L20; SPTR: B8D291 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L20P" /protein_id="YP_003827002.1" /db_xref="GI:302391182" /db_xref="GeneID:9512398" /translation="MPRVKRGNKRRKRRKKILKLAKGYFGTRSKLYRPAKQQVMKSLN YAYRDRKQKKRNFRKLWITRINAAARQHDLSYSRFIHGLREADVDINRKMLAELAVNN EDEFADLVELAKENI" misc_feature 423040..423315 /locus_tag="Acear_0390" /note="Ribosomal protein L20; Region: Ribosomal_L20; cd07026" /db_xref="CDD:197305" misc_feature order(423043..423066,423070..423081,423088..423093, 423103..423108,423115..423159,423163..423171, 423178..423180,423190..423192,423208..423213, 423220..423225,423232..423234,423256..423264) /locus_tag="Acear_0390" /note="23S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:197305" misc_feature order(423088..423090,423100..423102,423109..423114, 423118..423123,423130..423132,423247..423258, 423265..423267,423283..423288,423304..423309) /locus_tag="Acear_0390" /note="L21 binding site [polypeptide binding]; other site" /db_xref="CDD:197305" misc_feature order(423151..423153,423160..423165,423172..423174, 423181..423186,423190..423192,423262..423264, 423271..423273,423280..423282) /locus_tag="Acear_0390" /note="L13 binding site [polypeptide binding]; other site" /db_xref="CDD:197305" gene 423681..425024 /locus_tag="Acear_0391" /db_xref="GeneID:9512399" CDS 423681..425024 /locus_tag="Acear_0391" /EC_number="3.6.3.14" /note="COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR004772:IPR003445; KEGG: hor:Hore_11710 potassium uptake protein, TrkH family; PFAM: cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: B8CXA2 Potassium uptake protein, TrkH family; TIGRFAM: potassium uptake protein, TrkH family; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family" /codon_start=1 /transl_table=11 /product="potassium uptake protein, TrkH family" /protein_id="YP_003827003.1" /db_xref="GI:302391183" /db_xref="GeneID:9512399" /translation="MQLSDKFSLDNLTPAQFLSLGYLVVILTGTVLLSLPIATASGIR MPLIDALFTATSATAVTGLIVENTKNFFSGFGQIVILILIQIGGLGIMSMSTLFAMIV GKKITLKERLVIKQDLDQFELSGIIRLVRYVLFVTLVIEGTGALILFSRLIRDYDPLR ALYLAIFHSVSAFNNAGFDIFGNSLENFTGDLTINLVITTLIILGGIGFAVIAEIYKG EKKFKNYSLQTKLVLSISGSLILLGTIVVFVLEYSNPATMGNLPLHGKALASYFMSVT PRTAGFNTVPTGSLHNTTLFFVIILMFIGASPGSTGGGIKTTTFGSVLAVVYAMMTGK EDIEAFKRRIPKDVIFKALSIIIISVLLIVVVTMILTVTEDMPFLDLFFETVSAFGTV GLSTGVTGKLSGIGKLLIILTMFAGRVGPLTLFLAIGRKRIKGNIRYPEEKVLVG" misc_feature 423774..424934 /locus_tag="Acear_0391" /note="potassium uptake protein, TrkH family; Region: 2a38; TIGR00933" /db_xref="CDD:162118" misc_feature 424032..424973 /locus_tag="Acear_0391" /note="Cation transport protein; Region: TrkH; cl10514" /db_xref="CDD:187005" gene 425060..425710 /locus_tag="Acear_0392" /db_xref="GeneID:9512400" CDS 425060..425710 /locus_tag="Acear_0392" /note="COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148:IPR006037; KEGG: hor:Hore_11690 TrkA-N domain protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: B8CXA0 TrkA-N domain protein; PFAM: TrkA-N domain; TrkA-C domain" /codon_start=1 /transl_table=11 /product="TrkA-N domain protein" /protein_id="YP_003827004.1" /db_xref="GI:302391184" /db_xref="GeneID:9512400" /translation="MKQFVVVGLGRFGTSVATSLAEEGYDVLAIDKEEDLVQEITDKV THAVQADATDEDSLKTLGVNNFDVAVVSIGDDIQSSLLATLILKELGVEYVVVKAQTK LHGKVLNKIGADKIVYPERDMGVRVAYNLVTTNVLDYIELSPNYSIIEVLATDKLTGK TLRELELRAKFGINVIAIKKEENEINVTPEADDMVESGDVLVVMGQEKDLDKLREY" misc_feature 425063..425707 /locus_tag="Acear_0392" /note="K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]; Region: TrkA; COG0569" /db_xref="CDD:30915" misc_feature 425069..425416 /locus_tag="Acear_0392" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 425504..425707 /locus_tag="Acear_0392" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene 425779..427116 /locus_tag="Acear_0393" /db_xref="GeneID:9512401" CDS 425779..427116 /locus_tag="Acear_0393" /EC_number="3.6.3.14" /note="COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR004772:IPR003445; KEGG: hor:Hore_11710 potassium uptake protein, TrkH family; PFAM: cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: B8CXA2 Potassium uptake protein, TrkH family; TIGRFAM: potassium uptake protein, TrkH family; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family" /codon_start=1 /transl_table=11 /product="potassium uptake protein, TrkH family" /protein_id="YP_003827005.1" /db_xref="GI:302391185" /db_xref="GeneID:9512401" /translation="MRIISFKLDSLSPAQFLALGYIIVITVGALLLMLPAATVDGQGL GLINSLFTATSATAVTGLIVVNTGAYFTLFGQAVILLLIQIGGLGFMTTSTLLALILG KRINLKKRIIIQEDLNYFNLSGLIRLVQYVTLLTLGVELIGAILLFAPLSVEYSAGKA AFFSIFHAVSAFCNAGFDLFGNSLANFTNDVYINLVITALFIIGGIGFAVIADVYRKQ RFIDYSLNTKLVLVITLILIILGTCFVFLLEFSNPATLQGLSFKGKLLAAYFQGVTPR TAGFNTIPTGQMRNATLFFIIILMFIGASPGSTGGGLKTTTIGALLAVVYNLVKGNED IELFERRLSQSIIYKALAVTIISLIWIGLVVTVLTITEEANFLSILFETVSAYGTVGL STGITGGLSEAGRIIIILTMFLGRVGPLTLAVAIGERDKEGQMRYPEEKILIG" misc_feature 425869..427026 /locus_tag="Acear_0393" /note="potassium uptake protein, TrkH family; Region: 2a38; TIGR00933" /db_xref="CDD:162118" misc_feature 426127..427056 /locus_tag="Acear_0393" /note="Cation transport protein; Region: TrkH; cl10514" /db_xref="CDD:187005" gene 427137..427787 /locus_tag="Acear_0394" /db_xref="GeneID:9512402" CDS 427137..427787 /locus_tag="Acear_0394" /note="COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148:IPR006037; KEGG: hor:Hore_11690 TrkA-N domain protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: B8CXA0 TrkA-N domain protein; PFAM: TrkA-N domain; TrkA-C domain" /codon_start=1 /transl_table=11 /product="TrkA-N domain protein" /protein_id="YP_003827006.1" /db_xref="GI:302391186" /db_xref="GeneID:9512402" /translation="MRQFIVVGLGRFGLSVAQTLSQKGYDVLAIDKREAKVQDLSQIV THAVQADTTDETTLEKLGVGNFDTAIVSIGEDIHASILTTLILKEQGVDYVVVKAQDQ LHGKVLSKIGADKIVYPERDMGARIANNLILSNVLDYIEFAPDYSIIEMKATEQMVEK SLADLELRSKFGVNVMAIKDEEGLNIAPEAEEIVSKGDILIVIGSNENLEQMRNFS" misc_feature 427140..427781 /locus_tag="Acear_0394" /note="K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]; Region: TrkA; COG0569" /db_xref="CDD:30915" misc_feature 427146..427493 /locus_tag="Acear_0394" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 427581..427781 /locus_tag="Acear_0394" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene 427820..428626 /locus_tag="Acear_0395" /db_xref="GeneID:9512403" CDS 427820..428626 /locus_tag="Acear_0395" /note="COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537; KEGG: hor:Hore_05620 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: B8D292 tRNA/rRNA methyltransferase (SpoU); PFAM: SpoU rRNA methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, , group 3" /codon_start=1 /transl_table=11 /product="tRNA/rRNA methyltransferase (SpoU)" /protein_id="YP_003827007.1" /db_xref="GI:302391187" /db_xref="GeneID:9512403" /translation="MSEVISSFKNSKIKFLRSLYRKKYRRRNNKFILEGSRIITDALE AKADIDQIFYSAQFLSQQKNKELLAQLREVTEIIEITDSLLNKIADTATPQGIIAIVN QPEFELEDFLIEDNDLFLIIDRIQDPGNLGTILRTADGAGVDGVFLLKGTVDIYNLKT IRATMGSLFRVPVFGLNSPSDLTDILQMKDIQMVAADIEAKDYYYELDYNQPTALVIG NEGAGAQPETLKLADKKVKIPLSEGIDSLNAAIASGIIMYEMVRQRKNNP" misc_feature 427913..428620 /locus_tag="Acear_0395" /note="rRNA methylases [Translation, ribosomal structure and biogenesis]; Region: SpoU; COG0566" /db_xref="CDD:30912" misc_feature 427913..428137 /locus_tag="Acear_0395" /note="RNA 2'-O ribose methyltransferase substrate binding; Region: SpoU_sub_bind; pfam08032" /db_xref="CDD:149230" misc_feature 428168..428593 /locus_tag="Acear_0395" /note="SpoU rRNA Methylase family; Region: SpoU_methylase; cl00362" /db_xref="CDD:193788" gene 428718..428825 /locus_tag="Acear_0396" /db_xref="GeneID:9512404" CDS 428718..428825 /locus_tag="Acear_0396" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827008.1" /db_xref="GI:302391188" /db_xref="GeneID:9512404" /translation="MVTAAMFWQIFEQTGSIQAYLAYREFLGFNYNQVL" gene 429156..430175 /locus_tag="Acear_0397" /db_xref="GeneID:9512405" CDS 429156..430175 /locus_tag="Acear_0397" /EC_number="6.1.1.20" /note="COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterProIPR016160:IPR006195:IPR010978:IPR004529:IPR 004188:IPR002319; KEGG: hor:Hore_05630 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; PRIAM: Phenylalanine--tRNA ligase; SPTR: B8D293 Phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit" /codon_start=1 /transl_table=11 /product="phenylalanyl-tRNA synthetase, alpha subunit" /protein_id="YP_003827009.1" /db_xref="GI:302391189" /db_xref="GeneID:9512405" /translation="MEEKLQSIEETATNEVKEAADLEELEELRIKYLGKNGEVTEILQ NIGDLPPEQRPVVGKLGNKLKSKLENVIAERKEELKQAAKKERLKKERIDVTLTGRKD NLGSKHPLTQVIDEISEIFLGLGFGIVEGPEVEKDYYNFEALNIPKTHPARDMQDSFY ISEDILLRTHTSPVQVRTMEETEVPIRIIAPGRVYRVDEVDANHSPVFHQVEGLMIDQ NISFSDLKGILIKVVKELFGEDRKVRFRPSYFPFTEPSAEVDVSCALCGGEGCSTCSD TGWLEILGSGMVHPRVLEMSGLDPNEVSGFAFGMGVERIAILKYGITDIRRFYENDIR FLKQF" misc_feature 429156..430172 /locus_tag="Acear_0397" /note="phenylalanyl-tRNA synthetase subunit alpha; Validated; Region: pheS; PRK00488" /db_xref="CDD:179046" misc_feature 429204..429422 /locus_tag="Acear_0397" /note="Aminoacyl tRNA synthetase class II, N-terminal domain; Region: Phe_tRNA-synt_N; pfam02912" /db_xref="CDD:111764" misc_feature 429477..430157 /locus_tag="Acear_0397" /note="Phenylalanyl-tRNA synthetase (PheRS) alpha chain catalytic core domain. PheRS belongs to class II aminoacyl-tRNA synthetases (aaRS) based upon its structure and the presence of three characteristic sequence motifs. This domain is primarily responsible...; Region: PheRS_alpha_core; cd00496" /db_xref="CDD:29807" misc_feature order(429477..429479,429486..429488,429495..429500, 429519..429521,429534..429539,429543..429551, 429600..429602,429615..429617,429627..429644, 429687..429689,429708..429716,429726..429728, 429732..429734,429738..429740,429744..429746, 429768..429770,429819..429827,429831..429836, 429894..429896,429915..429923,429927..429929, 430020..430025,430140..430142,430146..430154) /locus_tag="Acear_0397" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29807" misc_feature 429531..429551 /locus_tag="Acear_0397" /note="motif 1; other site" /db_xref="CDD:29807" misc_feature order(429615..429623,429663..429665,429669..429671, 429678..429680,429741..429743,429747..429749, 429762..429770,429777..429779,429783..429785, 429789..429791,429903..429905,429909..429914, 429996..430013,430077..430088,430095..430097, 430128..430130) /locus_tag="Acear_0397" /note="active site" /db_xref="CDD:29807" misc_feature 429738..429749 /locus_tag="Acear_0397" /note="motif 2; other site" /db_xref="CDD:29807" misc_feature 430080..430097 /locus_tag="Acear_0397" /note="motif 3; other site" /db_xref="CDD:29807" gene 430207..432606 /locus_tag="Acear_0398" /db_xref="GeneID:9512406" CDS 430207..432606 /locus_tag="Acear_0398" /note="COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR012340:IPR020825:IPR005147:IPR005121:IPR 002547:IPR016027:IPR009061:IPR004532:IPR005146; KEGG: hor:Hore_05640 phenylalanyl-tRNA synthetase, beta subunit; PFAM: B3/4 domain protein; t-RNA-binding domain protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: B8D294 Phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial" /codon_start=1 /transl_table=11 /product="phenylalanyl-tRNA synthetase, beta subunit" /protein_id="YP_003827010.1" /db_xref="GI:302391190" /db_xref="GeneID:9512406" /translation="MKVSYNWLQDYIDFDYTPEELASKLTMAGLEVDGIEYQAEGLED IIIGEILEVNDHENADKLSLCLVDLGDIKEEIVCGAPNVEVGAKSPVAPVGTKLPTGM EIKEAEIRGVKSRGMLCSSDELGLQEERADGIMILDSGLEVGSNFTEALGLDDVIFEL DLTPNYADCLSMIGVAREVAVMTGNELQLPEAEIAEKGPEVTELTSIQVEDEELCPRY TARVIKDVEVKESPLWLQQRLKAVGIRPINNIVDITNYVLMEFGQPLHAFDYDVLTEN RIVVRRAEDGEKMVTLDEEERELDDDMLVIADAKEPVCIAGVMGGSDSEVTEETTDVL LEAANFSPASIRQTAKKLGLHSESSHRFERGVDINGTDLASRRAVELILDLAGGEVAQ GAIDKYPDPVKPLELELKVERVNNLLGTELTKEQIIEILVKLEFEVIDQGSKLKVKVP TFRGDVSRGADLIEEIARIYGYNEVEATISSGSILQGKRTQQQSIKKKTLDTLTGLGL YEVSTFSFTSQQVFDRINLPADSKLRETVKLANPLSSEHEILRTTLIPNLLEVLAENI NQNIEEVEIFELGRVFTPQEEKELPKERELLSGALMQKEEEDIWNLDAANFFTLKGKL EEYFAALNITDYEFISSQAATFHPGRTAEIRIGEKKAGIIGELHPDIVEEYELVPRTV LFELKFEVIVEAASDEVVYTELPKYPASTRDIALVVDQKVTANEIEEIIRKVAGELLE KIELFDLYQGEQLKAGTKSLAYSLTYRAVDRTLTDNEVNKLQSEIESELNQEVGAEIR Q" misc_feature 430207..432603 /locus_tag="Acear_0398" /note="phenylalanyl-tRNA synthetase subunit beta; Reviewed; Region: pheT; PRK00629" /db_xref="CDD:179078" misc_feature 430363..430647 /locus_tag="Acear_0398" /note="tRNA-binding-domain-containing prokaryotic phenylalanly tRNA synthetase (PheRS) beta chain. PheRS aminoacylate phenylalanine transfer RNAs (tRNAphe). PheRSs belong structurally to class II aminoacyl tRNA synthetases (aaRSs) but, as they aminoacylate...; Region: tRNA_bind_bactPheRS; cd02796" /db_xref="CDD:48399" misc_feature order(430387..430389,430426..430428,430486..430488, 430525..430527,430546..430548,430555..430557) /locus_tag="Acear_0398" /note="putative tRNA-binding site [nucleotide binding]; other site" /db_xref="CDD:48399" misc_feature 430846..431367 /locus_tag="Acear_0398" /note="B3/4 domain; Region: B3_4; cl11458" /db_xref="CDD:196242" misc_feature 431416..431622 /locus_tag="Acear_0398" /note="tRNA synthetase B5 domain; Region: B5; cl08394" /db_xref="CDD:195731" misc_feature 431734..432279 /locus_tag="Acear_0398" /note="Phenylalanyl-tRNA synthetase (PheRS) beta chain core domain. PheRS belongs to class II aminoacyl-tRNA synthetases (aaRS) based upon its structure. While class II aaRSs generally aminoacylate the 3'-OH ribose of the appropriate tRNA, PheRS is an...; Region: PheRS_beta_core; cd00769" /db_xref="CDD:29814" misc_feature order(431734..431736,431740..431748,431815..431826, 431857..431859,431899..431901,431929..431931, 431944..431946,431950..431952,431956..431958, 431977..431979,432073..432075) /locus_tag="Acear_0398" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29814" misc_feature 431734..431748 /locus_tag="Acear_0398" /note="motif 1; other site" /db_xref="CDD:29814" misc_feature 431875..431886 /locus_tag="Acear_0398" /note="motif 3; other site" /db_xref="CDD:29814" misc_feature 431950..431958 /locus_tag="Acear_0398" /note="motif 2; other site" /db_xref="CDD:29814" misc_feature 432319..432600 /locus_tag="Acear_0398" /note="Ferredoxin-fold anticodon binding domain; Region: FDX-ACB; pfam03147" /db_xref="CDD:190543" gene 433660..435184 /locus_tag="Acear_R0036" /db_xref="GeneID:9512407" rRNA 433660..435184 /locus_tag="Acear_R0036" /product="16S ribosomal RNA" /db_xref="GeneID:9512407" gene 435303..438253 /locus_tag="Acear_R0037" /db_xref="GeneID:9512408" rRNA 435303..438253 /locus_tag="Acear_R0037" /product="23S ribosomal RNA" /db_xref="GeneID:9512408" gene 438365..438481 /locus_tag="Acear_R0039" /db_xref="GeneID:9512409" rRNA 438365..438481 /locus_tag="Acear_R0039" /product="5S ribosomal RNA" /db_xref="GeneID:9512409" gene 438508..438581 /locus_tag="Acear_R0040" /db_xref="GeneID:9512410" tRNA 438508..438581 /locus_tag="Acear_R0040" /product="tRNA-Gln" /db_xref="GeneID:9512410" gene 438590..438665 /locus_tag="Acear_R0041" /db_xref="GeneID:9512411" tRNA 438590..438665 /locus_tag="Acear_R0041" /product="tRNA-Glu" /db_xref="GeneID:9512411" gene 438805..438891 /locus_tag="Acear_R0042" /db_xref="GeneID:9512412" tRNA 438805..438891 /locus_tag="Acear_R0042" /product="tRNA-Tyr" /db_xref="GeneID:9512412" gene 438899..438973 /locus_tag="Acear_R0043" /db_xref="GeneID:9512413" tRNA 438899..438973 /locus_tag="Acear_R0043" /product="tRNA-Gly" /db_xref="GeneID:9512413" gene 439134..439676 /locus_tag="Acear_0399" /db_xref="GeneID:9512414" CDS 439134..439676 /locus_tag="Acear_0399" /note="InterPro IPR007838; KEGG: cpf:CPF_2138 hypothetical protein; SPTR: B1BT25 Putative uncharacterized protein; PFAM: Cell division protein ZapA" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827011.1" /db_xref="GI:302391191" /db_xref="GeneID:9512414" /translation="MSIEEKDNQPSSEKEEVGKAKVTIFGDEYVIRAKESAEYIKQVA KCVNQELEEVTEKGARLSRIKMMVLAAMNLADKYYKSLDHEQEIEDKLRDREEELENL TKQYKELTKEYNNLQKEYDILKTKYEKLQQRYDDLDDKHQKLRKERNNFEKKYDDLQQ KYEELDNEYQEFLMEFDKED" misc_feature 439188..>439373 /locus_tag="Acear_0399" /note="Cell division protein ZapA; Region: ZapA; cl01146" /db_xref="CDD:194051" misc_feature 439437..>439646 /locus_tag="Acear_0399" /note="integrating conjugative element protein, PFL_4705 family; Region: conj_TIGR03752" /db_xref="CDD:188383" gene 439682..440170 /locus_tag="Acear_0400" /db_xref="GeneID:9512415" CDS 439682..440170 /locus_tag="Acear_0400" /note="InterPro IPR003825; KEGG: hor:Hore_05660 colicin V production protein; PFAM: Colicin V production protein; SPTR: B8D296 Colicin V production protein; PFAM: Colicin V production protein" /codon_start=1 /transl_table=11 /product="Colicin V production protein" /protein_id="YP_003827012.1" /db_xref="GI:302391192" /db_xref="GeneID:9512415" /translation="MQSINLLDFGIIIIIISSILRGYQKGMIRQVISIVALAVAFYVA MNNYQVVAVYFNNNFPITMSIAQVISFGLIVIVISAVINILGYLLNKLTGLLLLSMID GMGGAILGLIKGGLIVYILLILISRVPFPAAEDSLQASILADKFLSLTPIFEDKLQEF IN" misc_feature 439739..>439933 /locus_tag="Acear_0400" /note="Colicin V production protein; Region: Colicin_V; cl00567" /db_xref="CDD:193873" gene 440202..441917 /locus_tag="Acear_0401" /db_xref="GeneID:9512416" CDS 440202..441917 /locus_tag="Acear_0401" /note="COGs: COG1796 DNA polymerase IV (family X); InterProIPR010996:IPR016195:IPR010994:IPR002054:IPR 003583:IPR003141:IPR002934:IPR004013; KEGG: nth:Nther_1814 PHP domain protein; PFAM: PHP domain protein; DNA polymerase III subunit beta; SMART: DNA polymerase X; Helix-hairpin-helix DNA-binding class 1; phosphoesterase PHP domain protein; SPTR: B2A5N2 PHP domain protein; PFAM: PHP domain; Nucleotidyltransferase domain" /codon_start=1 /transl_table=11 /product="PHP domain protein" /protein_id="YP_003827013.1" /db_xref="GI:302391193" /db_xref="GeneID:9512416" /translation="MENLKVAWILEEIADLLKLKGANYFKIQSYYNVSKRIKNLETNI KKLVANNRLQDIEGIGESLAVTIDEILQTGTCSKYKELKEEIPIGLLEILDLPGVGPK KVKLFYDELGITDLDELKKAAKKQKLRKLSGIGAKTELKILDAIMKAKNRNDKIDLGL ATALAEELLDICAKLKSVTKVEVVGGLRRKKELISDLDLLVVTDNSKQVREVMKDVPL VTEVLTETDKSLELASKPGVPIEIFFIVEDEFYSALVAATGNQEHYEALSELAAQKGY CLNNTGVYQLDTNETVEIDSEKEIYQLLDLPYIIPELRTGDHEIEAAREGNLPVKLES ADIMGDLHVHTDWSDGGNTIQEMALAARDRGYKFLSICDHSKSLGVAGGLTIDDLKEQ IKEIEIINKELTDFRILKGAEVDILHNGDLDYPQEVLDELDMVVASVHSGFRQSGEQM TSRILRALDHEAVNVLGHPTGRLLGKRGPYAVDIEQVIKRAVKTDTVLEINASPHRLD LNGKHLRIAKEAGAKIAINTDAHNIQQLDNMQFGVYNARKGWIEPSEVINTYSLTELL ALLYN" misc_feature 440214..441143 /locus_tag="Acear_0401" /note="Nucleotidyltransferase (NT) domain of family X DNA Polymerases; Region: NT_POLXc; cd00141" /db_xref="CDD:143386" misc_feature 440229..441914 /locus_tag="Acear_0401" /note="hypothetical protein; Provisional; Region: PRK08609" /db_xref="CDD:181500" misc_feature order(440481..440483,440487..440489,440493..440510, 440517..440519,440622..440624,440664..440666, 440754..440759,440766..440768,440772..440774, 440778..440789,440793..440795,440886..440888, 440916..440918,440922..440924,440967..440984, 440991..440993,441039..441041) /locus_tag="Acear_0401" /note="active site" /db_xref="CDD:143386" misc_feature order(440481..440483,440487..440489,440493..440510, 440517..440519,440622..440624,440754..440756, 440766..440768,440784..440789,440793..440795, 440886..440888,440916..440918,440922..440924, 440967..440984,440991..440993) /locus_tag="Acear_0401" /note="primer binding site [nucleotide binding]; other site" /db_xref="CDD:143386" misc_feature order(440664..440666,440754..440759,440766..440768, 440772..440774,440778..440789,440793..440795, 440886..440888,440922..440924,440967..440978, 440982..440984,440991..440993,441039..441041) /locus_tag="Acear_0401" /note="NTP binding site [chemical binding]; other site" /db_xref="CDD:143386" misc_feature order(440787..440789,440793..440795,440922..440924) /locus_tag="Acear_0401" /note="metal binding triad [ion binding]; metal-binding site" /db_xref="CDD:143386" misc_feature 441219..>441341 /locus_tag="Acear_0401" /note="DNA polymerase alpha chain like domain; Region: POLIIIAc; smart00481" /db_xref="CDD:128757" gene 441952..442905 /locus_tag="Acear_0402" /db_xref="GeneID:9512417" CDS 441952..442905 /locus_tag="Acear_0402" /note="KEGG: dae:Dtox_2392 hypothetical protein; SPTR: C1T9G0 Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827014.1" /db_xref="GI:302391194" /db_xref="GeneID:9512417" /translation="MELEKIYELALELGIEADPRGKEEVERKLKEIREEYDEMDEEEK GEFDEAKLENPYSDTRILYGDQAREVESILVGIDIDVSEVLIADRLTEKGRNIDLVMS HHPEGKALAALHQVMHMQEDILYEHGVPINVAEDIMAERIQEVERRLMPVNHNKTRDA ARIFDIPLLSVHTPADNLVTEYLQSKIDKEKPDKVENVVQLLKEIPEYKEAVTEKAGP KVVVGSEDRRAGKVVVDMTGGTSGSKEAFKNLSQAGVGTLVCMHIGEEHRKKAEENHI NVVIAGHMASDSIGLNLFLDRLEEKGIEIIPCSGLIRVVRN" misc_feature 442111..442869 /locus_tag="Acear_0402" /note="NIF3 (NGG1p interacting factor 3); Region: NIF3; cl01309" /db_xref="CDD:194097" gene 442925..445330 /locus_tag="Acear_0403" /db_xref="GeneID:9512418" CDS 442925..445330 /locus_tag="Acear_0403" /note="COGs: COG1193 Mismatch repair ATPase (MutS family); InterProIPR000727:IPR002625:IPR007696:IPR000432:IPR 005747; KEGG: hor:Hore_05680 MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2; SPTR: B8D298 MutS2 protein; TIGRFAM: MutS2 family protein; PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein" /codon_start=1 /transl_table=11 /product="MutS2 family protein" /protein_id="YP_003827015.1" /db_xref="GI:302391195" /db_xref="GeneID:9512418" /translation="MEQHVLEILEYNKIKKRLAKHTSSKLARKLVDNLKPVSDFDFIQ ERQLEVTAAKKILNREEKYPPLGGIKDVRDSLKRTSKEITLNGEELVEIADTLSTSRN LKRYLLNLEDEEDEYKSVVKYGTQLDNFKPLERKINKAVDNQGNVLDTASTKLRNIRR SITDYSQRIKDKLNSILSSKKYQSYIQDSLVTIRDKRYVIPIKSQFQEKVSGIVHDQS ASKQTVFIEPMAVVKLNNKLRSFMAEEEEEVYRILTELTYEVREELDRIKETLKLLAW LDFTFAKAEYSFKIEGAEPVLNQEEYINLEKARHPLIPQDEVVPIDIKLGGKFDTLVI TGPNTGGKTVTLKTVGLLTLMAQSGLHIPALSGSKIAVFDEIHGDIGDEQSIEQNLST FSSHMTRIIDILETAQENNLVLLDEIGAGTDPTEGAALAMAILEELYSRGRINTIATT HYSQLKTFAYQQEGIQNASVEFDVETLQPTYRLQMGMPGRSNAFEIAGRLGLPTEVIE KARAKLSEEDIEVDRIIQSIEESKQSIVENEEAARKERKKAKELKEEYETKLEEVEKL EQKIKKDAYAEAEKIIAESKKKVNEVVTEMKEKAEVNQQEVDRAKSKIDEYKYNLSSE RVDLESDLKQQRIQQNSEDLEVGDKVRLKKLNKEGEIIELSEDKEEAVIQAGPMKVNV DISRLEQMDESDQQTEASNNSNGLNNDTNIGSLKNKKSRHISPKLDLRGLRAIEAKEK VDKYLDDAYLANISKAEIVHGKGSGVLREVVHDLLDEHSQIDEYRLGGKDEGGSGVTI VKF" misc_feature 442925..>444490 /locus_tag="Acear_0403" /note="recombination and DNA strand exchange inhibitor protein; Reviewed; Region: PRK00409" /db_xref="CDD:179009" misc_feature 443834..444430 /locus_tag="Acear_0403" /note="MutS2 homologs in bacteria and eukaryotes. The MutS protein initiates DNA mismatch repair by recognizing mispaired and unpaired bases embedded in duplex DNA and activating endo- and exonucleases to remove the mismatch. Members of the MutS family also...; Region: ABC_MutS2; cd03280" /db_xref="CDD:73039" misc_feature 443930..443953 /locus_tag="Acear_0403" /note="Walker A/P-loop; other site" /db_xref="CDD:73039" misc_feature order(443939..443944,443948..443956,444065..444067, 444170..444175,444275..444277) /locus_tag="Acear_0403" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73039" misc_feature 444056..444067 /locus_tag="Acear_0403" /note="Q-loop/lid; other site" /db_xref="CDD:73039" misc_feature 444080..444121 /locus_tag="Acear_0403" /note="ABC transporter signature motif; other site" /db_xref="CDD:73039" misc_feature 444158..444175 /locus_tag="Acear_0403" /note="Walker B; other site" /db_xref="CDD:73039" misc_feature 444182..444193 /locus_tag="Acear_0403" /note="D-loop; other site" /db_xref="CDD:73039" misc_feature 444263..444283 /locus_tag="Acear_0403" /note="H-loop/switch region; other site" /db_xref="CDD:73039" misc_feature <444707..445327 /locus_tag="Acear_0403" /note="recombination and DNA strand exchange inhibitor protein; Reviewed; Region: PRK00409" /db_xref="CDD:179009" misc_feature 445103..445327 /locus_tag="Acear_0403" /note="Smr domain; Region: Smr; cl02619" /db_xref="CDD:194381" gene 445361..445897 /locus_tag="Acear_0404" /db_xref="GeneID:9512419" CDS 445361..445897 /locus_tag="Acear_0404" /note="COGs: COG4739 Uncharacterized protein containing a ferredoxin domain; InterPro IPR019224; KEGG: nth:Nther_2899 conserved ferredoxin domain protein; PFAM: protein of unknown function DUF2148; SPTR: B2A440 Conserved ferredoxin domain protein; PFAM: Uncharacterized protein containing a ferredoxin domain (DUF2148)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827016.1" /db_xref="GI:302391196" /db_xref="GeneID:9512419" /translation="MFLKNQEAEKEGVLQAAKLMTTAARTAPKGKGVDNLATAVLGEG EEKEELVAEMKGLADESGAGFFKRDAENIAEADAVVLLGTETGAIGVPACGYCGFEDC SAQSQSENGVCAFNTGDLGIAVGSAVSKAADLRIDNRIMFTAGKAAVRLDLLGEDVEI AYGIALNAAGKNPFFDRG" misc_feature 445385..445891 /locus_tag="Acear_0404" /note="Uncharacterized protein containing a ferredoxin domain (DUF2148); Region: DUF2148; cl01957" /db_xref="CDD:154676" gene complement(445957..448344) /locus_tag="Acear_0405" /db_xref="GeneID:9512420" CDS complement(445957..448344) /locus_tag="Acear_0405" /note="COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR012338:IPR011816:IPR001264:IPR001460; KEGG: hor:Hore_05690 penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; SPTR: B8D299 Penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; transglycosylase; TIGRFAM: penicillin-binding protein, 1A family" /codon_start=1 /transl_table=11 /product="penicillin-binding protein, 1A family" /protein_id="YP_003827017.1" /db_xref="GI:302391197" /db_xref="GeneID:9512420" /translation="MSRFKKVSIISIILLFAILSGALIGSVAWIVNETPDISNYGRWK PSESTTIYSEDNKLLSRLYQENRVYAPIDRMPQNLQNAIVAIEDNRFYEHYGVDPWAI GRALWVDIKGGGIIQGGSTLTQQLAKNALLTHERTLYRKIQEAYLAIQFERMYTKEEI LEFYLNEIYLGHSVYGVQTAAEFYFDKDVENLTLPEAALLAGLPKAPNKYSPYKNKQK AKVRRNLVLEQMKKYGYITESQAEKAKNQPIKTENGLERKEDKAPYFVRHIRKKLIDM YGAQAVYNSGLKVYTTLDYEMQTKAEETVKEAFKDYIPSVNKKEGKGRLQPQIALTTI NPQNGHIKTMIGGRGEEEDRYNRVTQAYRQPGSAFKPFVYTAAVEQGYSPASVIDDTP EAYQVGSSSEDKWIPQNYNDEYLGPTTLRIGLAKSINVMAVKLLDKVGIDNTIEVAKK MGIKNIVETGAKNDKNLALALGGLTKGVTPLEMASSYGVLANEGVRVEPISLLKVVDN RGNVIYENDSNKKIVLDKDVTYIVNDMLESVLARGPIVWGTGWRANLGRPAAGKTGTT SNYTDAWFVGYTPDLVTSIWIGEDAPSKMKYKIKNEEKLLSANENEAKPNTNTISSAE TARLWSEYMRKIIKNKPVTEFSTTDNIVSKKICIESSKLPSKDCPENTIREEIFIKGT EPTEECELHQPTTEVKVDTSTGKLATDYCPPEKVRTYTYQQETHIKVDENGVPIKKVD EETKVPLRDDEGNYIYERMPEEKCEAHRPDSLQDKIKNQTDKIKEKFEEFFDISN" misc_feature complement(447652..448182) /locus_tag="Acear_0405" /note="Transglycosylase; Region: Transgly; cl07896" /db_xref="CDD:195645" misc_feature complement(446428..448149) /locus_tag="Acear_0405" /note="penicillin-binding protein, 1A family; Region: PBP_1a_fam; TIGR02074" /db_xref="CDD:188197" misc_feature complement(446608..447345) /locus_tag="Acear_0405" /note="Penicillin binding protein transpeptidase domain; Region: Transpeptidase; cl01039" /db_xref="CDD:154162" gene 448530..449762 /locus_tag="Acear_0406" /db_xref="GeneID:9512421" CDS 448530..449762 /locus_tag="Acear_0406" /EC_number="6.1.1.1" /note="COGs: COG0162 Tyrosyl-tRNA synthetase; InterProIPR014729:IPR001412:IPR002307:IPR002942:IPR 002305; KEGG: hor:Hore_05700 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: B8D2A0 Tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="tyrosyl-tRNA synthetase" /protein_id="YP_003827018.1" /db_xref="GI:302391198" /db_xref="GeneID:9512421" /translation="MSSESGIEKQLQIIKRGVTELISEDELEDKLKEAQKEDRPLKVK LGLDPTAPDIHLGHTVVLQKLKQFQDLGHEVILLIGDFTGRIGDPSGKSKTRPQLTEE EVMENAKTYQEQIFKVLDPDKTRLVFNSEWLGEMDFADVLNLSSKYTVARMLEREDFS NRYENNQSIGVHEFFYPLMQGYDSVAIEADVELGGTDQKFNLLVGRRLQKEYGQDPQV ILMMPLLEGLDGEQKMSKSLGNYIGIDDDPNDMYGKVMSIPDKLLGRYFELLTDVSLE ELEEIKNGLSSGELHPMETKKRLAETIVAKYYDETTAKKAAREFERVFKDGELPEDIP QVELSSDRLEDGELWIVKLVAATGLVDSNSQARRMIKQGAVKIDGEKYDKMNLDLEVE DGMIIQIGKKRFAEIILD" misc_feature 448548..449756 /locus_tag="Acear_0406" /note="tyrosyl-tRNA synthetase; Validated; Region: PRK05912" /db_xref="CDD:180311" misc_feature 448650..449444 /locus_tag="Acear_0406" /note="catalytic core domain of tyrosinyl-tRNA synthetase; Region: TyrRS_core; cd00805" /db_xref="CDD:173902" misc_feature order(448659..448661,448665..448673,448692..448694, 448698..448703,449055..449057,449067..449069, 449076..449078,449103..449105,449109..449114, 449121..449123,449199..449204,449226..449237) /locus_tag="Acear_0406" /note="active site" /db_xref="CDD:173902" misc_feature 448692..448703 /locus_tag="Acear_0406" /note="HIGH motif; other site" /db_xref="CDD:173902" misc_feature order(448773..448775,448782..448787,448941..448946, 448950..448958,448962..448967,448971..448982, 448986..448991,449043..449045,449049..449054, 449061..449066) /locus_tag="Acear_0406" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173902" misc_feature 449226..449240 /locus_tag="Acear_0406" /note="KMSKS motif; other site" /db_xref="CDD:173902" misc_feature 449577..449759 /locus_tag="Acear_0406" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cd00165" /db_xref="CDD:29105" misc_feature order(449610..449615,449619..449624,449628..449633, 449640..449645,449649..449651,449670..449681, 449688..449699,449703..449705) /locus_tag="Acear_0406" /note="RNA binding surface [nucleotide binding]; other site" /db_xref="CDD:29105" gene 449815..450480 /locus_tag="Acear_0407" /db_xref="GeneID:9512422" CDS 449815..450480 /locus_tag="Acear_0407" /note="InterPro IPR014197:IPR019061; KEGG: hor:Hore_05710 sporulation protein YunB; PFAM: sporulation protein YunB-like; SPTR: B8D2A1 sporulation protein YunB; TIGRFAM: sporulation protein YunB; PFAM: sporulation protein YunB (Spo_YunB); TIGRFAM: sporulation protein YunB" /codon_start=1 /transl_table=11 /product="sporulation protein YunB" /protein_id="YP_003827019.1" /db_xref="GI:302391199" /db_xref="GeneID:9512422" /translation="MYLSLKRLLALILIATLLFAFLFVILIEIKLRPIFHSISKTKVS TMVTKLVNQAIQQKSKEFTYGDLVKLKTDAEGNVVFMQPNIQKINHVSSRLALEIQSS LKKIKGKDIELPLLQVFGIDILADYGPKLDVRVIPYSSINTDIVDYFQSAGINQTRHK IDLQVIVNTRVVIPFLSEDIQIDTTVPLTEAVIVGDVPEVYVDLKNGLFGSSEADNKT NDN" misc_feature 449905..450426 /locus_tag="Acear_0407" /note="Sporulation protein YunB (Spo_YunB); Region: Spore_YunB; cl09783" /db_xref="CDD:158695" gene 450615..451133 /locus_tag="Acear_0408" /db_xref="GeneID:9512423" CDS 450615..451133 /locus_tag="Acear_0408" /note="COGs: COG3881 conserved hypothetical protein; InterPro IPR011033:IPR007903; KEGG: dge:Dgeo_1677 PRC-barrel domain-containing protein; PFAM: PRC-barrel domain protein; SPTR: Q1IXR2 PRC-barrel domain protein; PFAM: PRC-barrel domain" /codon_start=1 /transl_table=11 /product="PRC-barrel domain protein" /protein_id="YP_003827020.1" /db_xref="GI:302391200" /db_xref="GeneID:9512423" /translation="MNKGYEVIDLPVVNLETGKEIGDVKDVVFDPDTERIVGLIVEGG GFFKGDRMIPYDQLYSMGDDAVTIKDESALSDLDDTKDYLIDNPGDVIGSKVVTDDGK ELGIIEDIILNPDDGNRDSYEITDGLVHDILDGRGVLSVSNELKYGEDVVVVSNLEDY QELNNQQSTKEE" misc_feature 450615..451082 /locus_tag="Acear_0408" /note="PRC-barrel domain containing protein [General function prediction only]; Region: COG3881" /db_xref="CDD:33670" misc_feature 450615..450821 /locus_tag="Acear_0408" /note="Photosynthetic reaction center (RC) complex, subunit H; RC is an integral membrane protein-pigment complex which catalyzes light-induced reduction of ubiquinone to ubiquinol, generating a transmembrane electrochemical gradient of protons used to...; Region: PRCH; cl09959" /db_xref="CDD:164180" gene 451137..451406 /locus_tag="Acear_0409" /db_xref="GeneID:9512424" CDS 451137..451406 /locus_tag="Acear_0409" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827021.1" /db_xref="GI:302391201" /db_xref="GeneID:9512424" /translation="MIFNRKFWTGLTLGGLGGLYLLNYLREKNRQPTKREELEAFADR SQQKGKELLTDLISRLDLEAADLQNVDKSELMESLIEMENQNNDR" gene 451417..452463 /locus_tag="Acear_0410" /db_xref="GeneID:9512425" CDS 451417..452463 /locus_tag="Acear_0410" /note="COGs: COG0628 permease; InterPro IPR002549; KEGG: hor:Hore_05740 predicted permease; PFAM: protein of unknown function UPF0118; SPTR: B8D2A4 Predicted permease; PFAM: Domain of unknown function DUF20" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827022.1" /db_xref="GI:302391202" /db_xref="GeneID:9512425" /translation="MLDEKRQERKALLLVLLVAIIYFLYLVRIVLLPFVLAIFIVYLV NPFVKLLINRGVSRNLALVLIFIIVVGGLFLVGFFAAPPLIEELNALANRIPQYSIEI QKIIDSVTQKYQRFKLPSTFQLVVDNAIERIQNIILQFVERTTEVIIGILSRFFSLIM APILAFYMLKDIETIKKNFWTLIPKESRKDIKQLLKKIDKVLIDYLKGQLLVSVVVGL LSMLGLYLLDINFYLIIGIFAGIMNLIPYLGVVFGILPAVFVASFKSFQSILEVIVMF AFVQQLEGSLISPKIVGDKVGLHPILIIFSLLVGGELLGIIGMLLAVPVAGIIKVILN HYISRAIKINKGES" misc_feature 451495..452427 /locus_tag="Acear_0410" /note="Domain of unknown function DUF20; Region: UPF0118; cl00465" /db_xref="CDD:186015" gene 452569..455196 /locus_tag="Acear_0411" /db_xref="GeneID:9512426" CDS 452569..455196 /locus_tag="Acear_0411" /EC_number="6.1.1.7" /note="COGs: COG0013 Alanyl-tRNA synthetase; InterProIPR018164:IPR018165:IPR018162:IPR018163:IPR 002318:IPR012947:IPR003156; KEGG: hor:Hore_05750 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; PRIAM: Alanine--tRNA ligase; SPTR: B8D2A5 Alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="alanyl-tRNA synthetase" /protein_id="YP_003827023.1" /db_xref="GI:302391203" /db_xref="GeneID:9512426" /translation="MSMTSKEIRQKFLDYFESKGHLILPSAPLVPQNDPSLLWINAGM TPFKPYFNGQATPPKTRIVTSQKCIRTNDIGNVGKTDRHHTFFEMLGNFSFGDYFKEE AIKWSYDFLVNEIELKQDRLWISIYKDDEEAFEIWKNKIGIPTERIVRMGKDENFWQI GTGPCGPCSEIHYDLGAEFGCSDNCDFGCDCDRYREVWNLVFTQYDYTEDGEYKTLPS KNIDTGMGLERLASIIQQVDSNFETDLFIPIIEFISEHTEYDYESSDEIKSAYRVIAD HIRSVTLAIGDGVLPSNEGRGYIIRRVLRRAVRYAKKLDLKLPFLHRIVPVVVDIMGN EYTEIADKEEQIKKTIKSEEVKFQETLDQGMVILEELIDELEGEGREVIPGDEVFTLY DTYGFPKELTEEIAQERGYRIDSEGFEEAMEEQRARARAAQKDHDWSSAEIELFKELR DEIEMPEFVGYTQPECETEVVKIIKDNELVDSLSAGEEGQVVLTKTPFYAESGGQIGD KGALLSDDITVTVVDTQEKAELISHQVVIEAGKLSVGDKLTAKIQTDQRIYIRRNHTA THLLHQALRDILGEHVDQSGSLVTPERLRFDFTHFEAVSEEELKEIEERVNQVIRKNL EVEVLKTTLEEAKKMGAAALFSEQYDDEVRVIKIGDYSLELCGGTHVDAAGEINLFKI TSEGGIAAGVRRIEAVTGKEALNYINQQEDILKEAAAALKANPEEVVEKIEKLQSKIK DLEAEVTKFKNKLADSQADEVASDIEEINGINVVLEEVEGLDAEGLRTMGDNIKEELD SGIIILASKLGEKVLFVSLVTDDLVDEGYNAGQIIGEVARVAGGGGGGRPDMAQAGGS QPDKLDAAFKKARELIAAE" misc_feature 452572..455190 /locus_tag="Acear_0411" /note="alanyl-tRNA synthetase; Reviewed; Region: alaS; PRK00252" /db_xref="CDD:178947" misc_feature 452581..453279 /locus_tag="Acear_0411" /note="Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation...; Region: AlaRS_core; cd00673" /db_xref="CDD:29811" misc_feature 452635..452649 /locus_tag="Acear_0411" /note="motif 1; other site" /db_xref="CDD:29811" misc_feature order(452716..452718,452722..452724,452776..452778, 452827..452829,452833..452835,452839..452847, 453154..453159,453169..453171,453226..453231, 453241..453246,453253..453255) /locus_tag="Acear_0411" /note="active site" /db_xref="CDD:29811" misc_feature 452773..452781 /locus_tag="Acear_0411" /note="motif 2; other site" /db_xref="CDD:29811" misc_feature 453238..453255 /locus_tag="Acear_0411" /note="motif 3; other site" /db_xref="CDD:29811" misc_feature 454525..454656 /locus_tag="Acear_0411" /note="Threonyl and Alanyl tRNA synthetase second additional domain; Region: tRNA_SAD; cl08469" /db_xref="CDD:158351" gene 455230..455493 /locus_tag="Acear_0412" /db_xref="GeneID:9512427" CDS 455230..455493 /locus_tag="Acear_0412" /note="COGs: COG4472 conserved hypothetical protein; InterPro IPR009309; KEGG: llm:llmg_0150 hypothetical protein; PFAM: protein of unknown function DUF965; SPTR: A9QSH9 Putative uncharacterized protein ybeA; PFAM: Bacterial protein of unknown function (DUF965)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827024.1" /db_xref="GI:302391204" /db_xref="GeneID:9512427" /translation="MSRHDETMKFKVKKEEIKEVSEVLAEVYEALDEKGYNPINQIVG YILSGDPAYITSHQEARSKIRRFERDEIIEELVRNYLEDGKTE" misc_feature 455230..455487 /locus_tag="Acear_0412" /note="Bacterial protein of unknown function (DUF965); Region: DUF965; cl01857" /db_xref="CDD:186481" gene 455535..457673 /locus_tag="Acear_0413" /db_xref="GeneID:9512428" CDS 455535..457673 /locus_tag="Acear_0413" /note="InterPro IPR017850; KEGG: hor:Hore_05770 hypothetical protein; SPTR: B8D2A7 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827025.1" /db_xref="GI:302391205" /db_xref="GeneID:9512428" /translation="MNPRIFLIALMLCLVISQAAVADGSTEFTLFIMDQVSLKEIMQT ETPNIDYLINQGAVGLMNARTSGSLTPPDTYLTIGAGRRADGGKAANYNFNVQFDKEQ IINNSFSQLIAANLEGRYSAYPGALGEKLDKAKKQVAVIGNSDYYDQNGQYQLGREAA LIGINEEGRISLGDVGPKTVQIDTTYPGRVLTDHDYLLGKFKQYSSIADLIIVESGDT ARIAKMRDSIPETRFNRLKKCAIKRVDKLLGQLLAEINLSQNKIMIVTPTPPRKAQQK GEKLNLTILAGSGVKHGLLTSSTTKRSGIITNLDIAPTVLTSLGIDEDSSKLIGNSIN GIEAESPLTKLYHLDNRINKTFTWRPVLIKGFILLQIFTLVLAAVVILAHKRVTLRLK KITEYLLLSLLVIPIFILFFTFFVKLNIYLIIISFLLLSLGTAYLLKRSFDHELMPVL LLANLVSFLLVFDLWNNASLIKTSVLGYSPVIGARYYGLGNEFMGLLIGAVLIGVIGI FDCFCNLKQKQDYILLSIFILVVITIGHSQLGANFGGLLTSLAAFSFTYGLIKGYLFN FRKILVIIILVGLLTGSLVIYDALSPQAESTHIGRTVRLVEENGFSVIAKIAARKLSM NLKLLRWTIWTKVILAFIIILAILFRYPVGVVRNIIDDYSYLRYGFGGVICGSIVTML VNDSGVVATATLLLYPVITLVYLVIRRIEL" gene 457704..458120 /locus_tag="Acear_0414" /db_xref="GeneID:9512429" CDS 457704..458120 /locus_tag="Acear_0414" /note="COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); InterPro IPR005227:IPR012337:IPR006641; KEGG: drm:Dred_0775 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; SPTR: C0GKI3 Holliday junction resolvase YqgF; PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: conserved hypothetical protein TIGR00250" /codon_start=1 /transl_table=11 /product="Holliday junction resolvase YqgF" /protein_id="YP_003827026.1" /db_xref="GI:302391206" /db_xref="GeneID:9512429" /translation="MSRILGLDFGDKRIGAATSDALGWTAQGKKVIQNTSWEEVVAEI NSLIEQYDVGKVVVGLPKNMNGTLGPRAEKTLDFVEQLKEEIEPPIITWDERLSTAAA ERTLLKADVSRAKRKDVIDKMAAVVILQSYLDAQSS" misc_feature 457710..458108 /locus_tag="Acear_0414" /note="Uncharacterised protein family (UPF0081); Region: UPF0081; cl00525" /db_xref="CDD:186059" gene 458135..458419 /locus_tag="Acear_0415" /db_xref="GeneID:9512430" CDS 458135..458419 /locus_tag="Acear_0415" /note="KEGG: cbl:CLK_1946 hypothetical protein; SPTR: B1KXB4 UPF0473 protein CLK_1946; PFAM: protein of unknown function (DUF1292)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827027.1" /db_xref="GI:302391207" /db_xref="GeneID:9512430" /translation="MNNMAEEGMIREFDPEEGVVVLEEMDGEEIEFSIEEEVEIDDDK YFILVREDELDVGEGYALRLDKDDNGDLILVPVDSDEELVKVQTALENMN" gene 458507..458806 /locus_tag="Acear_0416" /db_xref="GeneID:9512431" CDS 458507..458806 /locus_tag="Acear_0416" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827028.1" /db_xref="GI:302391208" /db_xref="GeneID:9512431" /translation="MLLAECFLDDHYFRIESTTHAMDRIKERSIDISLVTSIILNLGN KLLDYNDTGDEVAVVDQKNNLAVIIEVREGKAVVITVIDRANIHIKDGTLLEEIA" gene 459594..460622 /locus_tag="Acear_0417" /db_xref="GeneID:9512432" CDS 459594..460622 /locus_tag="Acear_0417" /note="COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: hor:Hore_05820 aminodeoxychorismate lyase; PFAM: aminodeoxychorismate lyase; SPTR: B8D2B2 Aminodeoxychorismate lyase; PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein TIGR00247" /codon_start=1 /transl_table=11 /product="aminodeoxychorismate lyase" /protein_id="YP_003827029.1" /db_xref="GI:302391209" /db_xref="GeneID:9512432" /translation="MFDFQSRNRNLAAVVIMILFILTLTSISYLQKWTGPVDRGAVSA YEVEVKSGASSGQIANLLFEKKLIRHPFLFKALVRFKGVENKLRAGYYRLSTGMSIDE MIDKLVSNEVITYQVTIPEGYTVEEIGDKLSKKAGFSKKQFLTVAEELKAEFSFAEEI DVKHRKYPLEGYLFPETYSIPKGTAPENIIKLMVGQFKEKLIDKLITEVKQSKYSLDE IITIASLVEAEVKYDKERRLIAGVIHNRLNKNMLLQIDATIQYILPEHKEQILYKDLA LDSPYNTYQRLGLPPGPINNPGLASIRAALNPAETDYLYYFALEDGSHKFSETYQEHL RLQNKLKY" misc_feature 459726..460610 /locus_tag="Acear_0417" /note="YceG-like family; Region: YceG; pfam02618" /db_xref="CDD:190367" misc_feature 459852..460601 /locus_tag="Acear_0417" /note="proteins similar to Escherichia coli yceG; Region: yceG_like; cd08010" /db_xref="CDD:153433" misc_feature order(459852..459854,459858..459875,459900..459902, 459912..459914,459933..459938,459945..459947, 460353..460355,460359..460361,460407..460409, 460416..460418,460557..460562,460581..460583, 460590..460595) /locus_tag="Acear_0417" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:153433" gene 461104..461757 /locus_tag="Acear_0418" /db_xref="GeneID:9512433" CDS 461104..461757 /locus_tag="Acear_0418" /note="COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: cac:CAC1686 S-adenosylmethionine-dependent methyltransferase; PFAM: O-methyltransferase family 3; SPTR: Q97IF5 S-adenosylmethionine-dependent methyltransferase; PFAM: O-methyltransferase" /codon_start=1 /transl_table=11 /product="O-methyltransferase family 3" /protein_id="YP_003827030.1" /db_xref="GI:302391210" /db_xref="GeneID:9512433" /translation="MSKNILTDFVQDYIEEINPEPTGELKRLEEEALGKNIPIITPEI GQFLSLLIDIHRPERILELGTATGYSTAWLAKDNDCEIVTIELKEREAKVARKNFKEL GLEDRVELLVGDAVEVMDELEEKFDFIFIDAAKGQYVEFLKQSLKVVKEGGLIVADNI LFKGMIANDDLMHPRYDTLTYRIREYIDEVMNHPELKSSILPLGDGLAISMKLGKEE" misc_feature 461113..461745 /locus_tag="Acear_0418" /note="Predicted O-methyltransferase [General function prediction only]; Region: COG4122" /db_xref="CDD:33879" misc_feature 461278..461571 /locus_tag="Acear_0418" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature order(461290..461310,461359..461364,461440..461448, 461497..461499) /locus_tag="Acear_0418" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 461760..462989 /locus_tag="Acear_0419" /db_xref="GeneID:9512434" CDS 461760..462989 /locus_tag="Acear_0419" /note="COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: hor:Hore_05840 peptidase U32; PFAM: peptidase U32; SPTR: B8D2B4 peptidase U32; PFAM: peptidase family U32" /codon_start=1 /transl_table=11 /product="peptidase U32" /protein_id="YP_003827031.1" /db_xref="GI:302391211" /db_xref="GeneID:9512434" /translation="MEDVPELLAPAGNLEKLKIAVLYGADAVYVGGELYNLREAADNF TIEDLQEGLEFAHKRGVKVYVTVNMIPHNENLKDLPEYIAKLDGIGVDAVIVADPGVL SIVREAAPEMEIHLSTQANNVNWRSLQFWQKQGVERVILARELSINEMKEINKRVDVD TEAFIHGAMCISYSGRCLLSNYMINRDANRGECAQSCRWEYTLMEAERPGEYHPIVED ENGTYIFNSKDLCMIEHIPELMATGVSSFKIEGRMKSLHYVATVVNTYRQALDEWAED PENYTFKEEWLDELKKISHRHYTTGFYFDQPGAEGQNYETSSYVRDYDFMGIVQEYLP ETEEAVIEVRSKFFEGDEVEIFGPKTDSFIEELEYIKNEEGERILDAPHPHQLITVKV EEPVEKYDLVRREKRDE" misc_feature 461772..462905 /locus_tag="Acear_0419" /note="putative protease; Provisional; Region: PRK15452" /db_xref="CDD:185349" misc_feature 461985..462686 /locus_tag="Acear_0419" /note="Peptidase family U32; Region: Peptidase_U32; cl03113" /db_xref="CDD:194534" gene 462989..463216 /locus_tag="Acear_0420" /db_xref="GeneID:9512435" CDS 462989..463216 /locus_tag="Acear_0420" /note="KEGG: hor:Hore_05850 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827032.1" /db_xref="GI:302391212" /db_xref="GeneID:9512435" /translation="MDTLLIKLEVEKPQMSYVNNILKAYEGLAMVTIIGGDTGKMELQ VPPSTKEDVLAILDDLADKIELEITYIEDEE" gene complement(463390..464145) /locus_tag="Acear_0421" /pseudo /db_xref="GeneID:9512436" gene 464484..465305 /locus_tag="Acear_0422" /db_xref="GeneID:9512437" CDS 464484..465305 /locus_tag="Acear_0422" /note="KEGG: bbe:BBR47_47820 hypothetical protein; SPTR: C0ZKT2 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827033.1" /db_xref="GI:302391213" /db_xref="GeneID:9512437" /translation="MKNNIKKLMLLSLLILVVTLGFTETILSTNLNIDKEALASQLEL KENIEIITMQEIEVTGDGISDKVILLGSKVGPGESPFRDNLMVVVEDGENQRYLTATY DNFAGYNPELLTRDFTGDQVDDVMITANSGGSGGIYHHLIATFKDGEAEVIFAEDNNR GIEVTGQFIPDFKARLNFVGLDKEVILDISANKDEYIKQRIYNREGALVTKRLIRPYS YPFSRLEAVDYNNDGQYELRGLQKIVGTCGADKISEVDSIWSYKNQQWTLKAVEL" gene complement(465456..466121) /locus_tag="Acear_0423" /db_xref="GeneID:9512438" CDS complement(465456..466121) /locus_tag="Acear_0423" /note="InterPro IPR017900:IPR017896:IPR001450; KEGG: cce:Ccel_0631 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C4IJ56 Iron-sulfur cluster-binding protein" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003827034.1" /db_xref="GI:302391214" /db_xref="GeneID:9512438" /translation="MRQKGLAGTIGKWSWILIVAFLGIGWKYPVIGSIALVCMLAPAI TAAWKGGRIWCGSFCPRGSFNDNLLSKISRSIEIPKFIRTVWFRIGFALFLVYNFVVG IINAQGDLIKIGFVFYKIILITSIITVILGIMYHERTWCSFCPMGSLSALITKIRRRW FEQDKRIIVNENTCVDCSVCAKDCPMDLKPHDFVKSNDKDLDCIHCEKCVYNCPVDAL TRN" misc_feature complement(465465..>466028) /locus_tag="Acear_0423" /note="ferredoxin-type protein, NapH/MauN family; Region: napH_; TIGR02163" /db_xref="CDD:162737" misc_feature complement(465885..466019) /locus_tag="Acear_0423" /note="4Fe-4S binding domain; Region: Fer4_5; pfam12801" /db_xref="CDD:193277" gene 466286..466801 /locus_tag="Acear_0424" /db_xref="GeneID:9512439" CDS 466286..466801 /locus_tag="Acear_0424" /note="COGs: COG5423 metal-binding protein; InterPro IPR019271; KEGG: gsu:GSU0751 hypothetical protein; PFAM: protein of unknown function DUF2284, metal-binding; SPTR: Q74F58 Putative uncharacterized protein; PFAM: Predicted metal-binding protein (DUF2284)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827035.1" /db_xref="GI:302391215" /db_xref="GeneID:9512439" /translation="MNTELKEKLISKAEEMGVVDIVSFTVDQIEFDSRTLLKCMFGCE DWGNGNTCPSRPGSLKPWEYRKIFEEYSWGVIVHTNDKKLSQKISYELEELAFREGCY FAFSLSDCALCSECAGFNDESCRFPKQARPAFHSVGIDVFKTVRKFGLPIETLKKADE EKNWYSAVFVK" misc_feature 466364..466795 /locus_tag="Acear_0424" /note="Predicted metal-binding protein (DUF2284); Region: DUF2284; cl02248" /db_xref="CDD:154819" gene 466884..467591 /locus_tag="Acear_0425" /db_xref="GeneID:9512440" CDS 466884..467591 /locus_tag="Acear_0425" /note="COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR011991:IPR000943:IPR013325:IPR013324:IPR 014209:IPR014284:IPR016263:IPR007627:IPR007630; KEGG: hor:Hore_05860 sporulation sigma factor SigK; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; SPTR: B8D2B6 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-K factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-K factor" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 27/28 subunit, RpsK/SigK" /protein_id="YP_003827036.1" /db_xref="GI:302391216" /db_xref="GeneID:9512440" /translation="MIPGFLAGIGSSLADGILVLISYIANNNIFPQPLDDEEEKKYLT RYLEGDEEAKEVLIEHNMRLVAHIVKKYNNSNVDKEDLISIGSIGLIKAIETYDPSKK VKLATYASRCIENEILMHFRQNKKTNREVKLHDPLSSDKEGNEMTLMDVYETDEEAVL EKVEMALAEERLYDKIEGLSEREQKVVKMRYGLNNVEELTQREIANKLGISRSYVSRI EKRALQKLNQLFCTNGG" misc_feature 466893..467561 /locus_tag="Acear_0425" /note="sporulation sigma factor SigK; Reviewed; Region: PRK05803" /db_xref="CDD:180266" misc_feature 467052..467264 /locus_tag="Acear_0425" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature 467391..467561 /locus_tag="Acear_0425" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cd06171" /db_xref="CDD:100119" misc_feature order(467421..467423,467451..467453,467481..467486, 467514..467516,467520..467525,467529..467537, 467541..467546,467550..467552) /locus_tag="Acear_0425" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:100119" gene 467720..467887 /locus_tag="Acear_0426" /db_xref="GeneID:9512441" CDS 467720..467887 /locus_tag="Acear_0426" /note="KEGG: pca:Pcar_1582 hypothetical protein; SPTR: Q3A481 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827037.1" /db_xref="GI:302391217" /db_xref="GeneID:9512441" /translation="MPRGDGTGPRGEGSQTGRNAGYCSGFDQPGYANDEVPRQRLAHR RGKRGGRNRRR" gene 468067..468987 /locus_tag="Acear_0427" /db_xref="GeneID:9512442" CDS 468067..468987 /locus_tag="Acear_0427" /note="InterPro IPR002482:IPR018392; KEGG: hor:Hore_13890 peptidoglycan-binding LysM; PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; SPTR: B8CXX0 peptidoglycan-binding LysM; PFAM: LysM domain" /codon_start=1 /transl_table=11 /product="peptidoglycan-binding lysin domain protein" /protein_id="YP_003827038.1" /db_xref="GI:302391218" /db_xref="GeneID:9512442" /translation="MDGIFLAREIRNRERELNSLYKRLDQQVTDGNLQNLVNQLRQHQ SQQLSQLDELIKGLEGPRPFPPTVRLARHVVQQGETLSQIASQYNTTVANLLRVNPDI DDPDMIQAGKTIRLPIILPPSPECYFEYEVKRGDTLFKLTQQFNTTVNELVYYNSIKD PDLIYPGQILIIPCPEDETSDDDKEISEELTFNTLDRSNANNYSGSIEEKLFAASTRA QLRRALNNFNIRVPTRVNFNTDIVIGAIEYDIENLYLEDRRIRVVVDRKARGYHLVTV PRDQFREQGSYRVYFVTRDNRTLDRDRVNI" misc_feature 468283..468417 /locus_tag="Acear_0427" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature order(468283..468285,468292..468294,468301..468303, 468316..468318,468325..468327) /locus_tag="Acear_0427" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature 468454..468585 /locus_tag="Acear_0427" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature order(468454..468456,468463..468465,468472..468474, 468487..468489,468496..468498) /locus_tag="Acear_0427" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" gene 469345..469755 /locus_tag="Acear_0428" /db_xref="GeneID:9512443" CDS 469345..469755 /locus_tag="Acear_0428" /note="COGs: COG1943 transposase and inactivated derivatives; InterPro IPR002686; KEGG: mma:MM_3037 transposase; PFAM: transposase IS200-family protein; SPTR: Q8PRR7 transposase; PFAM: transposase IS200 like" /codon_start=1 /transl_table=11 /product="transposase IS200-family protein" /protein_id="YP_003827039.1" /db_xref="GI:302391219" /db_xref="GeneID:9512443" /translation="MSNQNNLIHARTCVYNVGYHIVFTVKCRKKVLTGKVATRLKEVL HQVAQDKEFIIETMELMPDYVDLFVTAHPKIAPSYIVKMSKGISGRLLLKEFPKLKEE LYKGHLWNKSYYLETVGSISKDTVKQYIENQKSK" misc_feature 469384..469743 /locus_tag="Acear_0428" /note="Transposase IS200 like; Region: Y1_Tnp; cl00848" /db_xref="CDD:154036" gene 469889..470410 /locus_tag="Acear_0429" /db_xref="GeneID:9512444" CDS 469889..470410 /locus_tag="Acear_0429" /note="COGs: COG2179 hydrolase of the HAD superfamily; InterPro IPR010021:IPR006549:IPR005834; KEGG: hor:Hore_05870 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; PFAM: haloacid dehalogenase; SPTR: B8D2B7 HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: protein of unknown function; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668" /codon_start=1 /transl_table=11 /product="HAD superfamily (subfamily IIIA) phosphatase, TIGR01668" /protein_id="YP_003827040.1" /db_xref="GI:302391220" /db_xref="GeneID:9512444" /translation="MELKDAIIDLCRPDFYYKSIYDINLQQLKELGINGLICDLDNTL LAWNHHQVEPQIKEWIAHIKELGISVCILSNSLQVRVDKISNILQLPAVSQALKPRKR AFKTAINKLNVNSNRIAVIGDQLFTDVFGGNRLDLLTILVDPIADKEFVTTKLIRLLE KNFKKELELIQKE" misc_feature 469994..470314 /locus_tag="Acear_0429" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature order(470003..470011,470108..470113) /locus_tag="Acear_0429" /note="active site" /db_xref="CDD:119389" misc_feature 470003..470020 /locus_tag="Acear_0429" /note="motif I; other site" /db_xref="CDD:119389" misc_feature 470108..470110 /locus_tag="Acear_0429" /note="motif II; other site" /db_xref="CDD:119389" gene 470417..471121 /locus_tag="Acear_0430" /db_xref="GeneID:9512445" CDS 470417..471121 /locus_tag="Acear_0430" /note="COGs: COG3773 Cell wall hydrolyses involved in spore germination; InterPro IPR002477:IPR011105; KEGG: hor:Hore_05880 cell wall hydrolase SleB; PFAM: cell wall hydrolase SleB; peptidoglycan-binding domain 1 protein; SPTR: B8D2B8 Cell wall hydrolase SleB; PFAM: Putative peptidoglycan binding domain; Cell Wall Hydrolase; TIGRFAM: spore cortex-lytic enzyme" /codon_start=1 /transl_table=11 /product="cell wall hydrolase SleB" /protein_id="YP_003827041.1" /db_xref="GI:302391221" /db_xref="GeneID:9512445" /translation="MKKVSKYHTILLILVFIFFISIFIDKPVAQASSSYNFEFGARDL KYGDEGVDVVFLQVQLKVLGFYEGEIDGLFGRGTLEAVEKFQNKNDLKVNGIVDKNVY KYLELGNYAEQNEFVQHKIMTLARAINGEARGESFRGQVGVGAVILNRVRNDEFANSI KEVIYEDGQFTSVVDGQVNLPPTELSIKAAKAALIGYDPTGNARFFYNPKIATKLEWI SSRPKIVKIDNHIFAD" misc_feature 470546..471115 /locus_tag="Acear_0430" /note="spore cortex-lytic enzyme; Region: spore_SleB; TIGR02869" /db_xref="CDD:131916" misc_feature 470561..470731 /locus_tag="Acear_0430" /note="Putative peptidoglycan binding domain; Region: PG_binding_1; pfam01471" /db_xref="CDD:190001" misc_feature 470813..471115 /locus_tag="Acear_0430" /note="Cell Wall Hydrolase; Region: Hydrolase_2; pfam07486" /db_xref="CDD:191754" gene 471260..471676 /locus_tag="Acear_0431" /db_xref="GeneID:9512446" CDS 471260..471676 /locus_tag="Acear_0431" /note="COGs: COG5341 conserved hypothetical protein; InterPro IPR010739; KEGG: dsy:DSY0901 hypothetical protein; PFAM: protein of unknown function DUF1312; SPTR: Q24Z52 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1312)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827042.1" /db_xref="GI:302391222" /db_xref="GeneID:9512446" /translation="MFQKLRGILTTYDKILIISILLFTIVGIGWSVFNLAEDNQSAKY VVIEHKNQVLNKFRLTSDFQKRITIDLDHGTAEIMVENGEVRMMEMPREICPLGICSD TGWVSNVGETIVCIPNQIVIAVEAQDSEDKIDGISY" misc_feature 471389..471634 /locus_tag="Acear_0431" /note="N-Utilization Substance G (NusG) N terminal (NGN) insert and Lin0431 are part of DUF1312; Region: DUF1312; cd09846" /db_xref="CDD:197363" gene 471701..472825 /locus_tag="Acear_0432" /db_xref="GeneID:9512447" CDS 471701..472825 /locus_tag="Acear_0432" /note="COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR003042:IPR011777:IPR006076; KEGG: pth:PTH_0557 dehydrogenases; PFAM: FAD dependent oxidoreductase; SPTR: A5D4V1 Dehydrogenases; TIGRFAM: geranylgeranyl reductase; PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase; geranylgeranyl reductase family" /codon_start=1 /transl_table=11 /product="geranylgeranyl reductase" /protein_id="YP_003827043.1" /db_xref="GI:302391223" /db_xref="GeneID:9512447" /translation="MKYDILIVGAGPAGAYTAYRLAQADLDVLLLEKEELPRYKPCGG GLTSKVFGIIPEFNLDHVIEDKISTVVFTHNVEAPIKLDFIEPFTYMTMRDKFDYFLV QQAKEVGVKVIDNTPVVDIRCMSDRVRVCTTGSEYTAKYIIGADGARSLVAQQLGLMD GVESAIAYEKEIKVSSQLLEAQRGIMNLDYGIIHGGYSWIFPKVDHFSVGVGTFAEGV SLKKSLEDYLAKGKIDDYKELKAKGHPLPVGGSKRELTYKRAVLIGDAAGLVDPLSGE GIFYALKSADLASRILLDVIRRGKSLSRYTTLINQEILPEFRKAELIKKIFFKFSDLL HKLFMKENWILKKLIQVIYGDDTYSNLYDNIQNQIPLLKF" misc_feature 471707..472720 /locus_tag="Acear_0432" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 471707..472576 /locus_tag="Acear_0432" /note="geranylgeranyl reductase family; Region: GG-red-SF; TIGR02032" /db_xref="CDD:162668" gene complement(472886..473146) /locus_tag="Acear_0433" /db_xref="GeneID:9512448" CDS complement(472886..473146) /locus_tag="Acear_0433" /note="InterPro IPR006339:IPR007159; KEGG: hor:Hore_06360 transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; SPTR: B8D2G6 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family" /codon_start=1 /transl_table=11 /product="AbrB family transcriptional regulator" /protein_id="YP_003827044.1" /db_xref="GI:302391224" /db_xref="GeneID:9512448" /translation="MKSTGIVRKVDDLGRIVIPIELRRTLGLETKDSLEIYVDNDKII FKKYEPACIFCGNAENTIDFKNKIICSECLDKMVEKSEEKPA" misc_feature complement(<472994..473146) /locus_tag="Acear_0433" /note="SpoVT / AbrB like domain; Region: SpoVT_AbrB; cl00877" /db_xref="CDD:186236" gene 473517..474701 /locus_tag="Acear_0434" /db_xref="GeneID:9512449" CDS 473517..474701 /locus_tag="Acear_0434" /EC_number="3.6.3.32" /note="COGs: COG4175 ABC-type proline/glycine betaine transport system ATPase component; InterProIPR018247:IPR017871:IPR003439:IPR000644:IPR 003593:IPR005892:IPR012597; KEGG: dae:Dtox_0515 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; Fungal mating-type pheromone; hypothetical protein; SMART: AAA ATPase; hypothetical protein; SPTR: B1BAC9 glycine betaine transport ATP-binding protein opuAA; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit" /codon_start=1 /transl_table=11 /product="glycine betaine/L-proline ABC transporter, ATPase subunit" /protein_id="YP_003827045.1" /db_xref="GI:302391225" /db_xref="GeneID:9512449" /translation="MKEIEVNNLSKIFGNNPQEGIELLKEGYSKDEILEKTGLTVGVN DVSFKVNTEEIFVIMGLSGSGKSTLLRCLNRLIEPTAGELKLKDQNLMDLDQQSLRQM RRDKFGMVFQNFALFPNRTVLENAEFGLEIQDVPKEEREVQAKEALKRVGLDGWEDQY PEQLSGGMQQRVGLARALAVDPEILLMDEPFSALDPLIKKEMQDELLDIYQDLDKTIL FITHDLDEALKLGDRIAIMNDGKIVQIGTPEEILTDAENDYVKEFVQDVNRSRILTAE DIMTKPLALLYDQDGPHTAMHKMRQNEISSIFVVDKERKLKGIVEIEDAVEGVNKGQK DLEGIMKETPTTNPDENLDELFSEIADLDIPLPVINDEGKLLGLIIKSNVLANLASEE RV" misc_feature 473517..474692 /locus_tag="Acear_0434" /note="ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]; Region: ProV; COG4175" /db_xref="CDD:33915" misc_feature 473526..474332 /locus_tag="Acear_0434" /note="This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these...; Region: ABC_Pro_Gly_Bertaine; cd03294" /db_xref="CDD:73053" misc_feature 473694..473717 /locus_tag="Acear_0434" /note="Walker A/P-loop; other site" /db_xref="CDD:73053" misc_feature order(473703..473708,473712..473720,473850..473852, 474078..474083,474180..474182) /locus_tag="Acear_0434" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73053" misc_feature 473841..473852 /locus_tag="Acear_0434" /note="Q-loop/lid; other site" /db_xref="CDD:73053" misc_feature 474006..474035 /locus_tag="Acear_0434" /note="ABC transporter signature motif; other site" /db_xref="CDD:73053" misc_feature 474066..474083 /locus_tag="Acear_0434" /note="Walker B; other site" /db_xref="CDD:73053" misc_feature 474090..474101 /locus_tag="Acear_0434" /note="D-loop; other site" /db_xref="CDD:73053" misc_feature 474168..474188 /locus_tag="Acear_0434" /note="H-loop/switch region; other site" /db_xref="CDD:73053" misc_feature 474384..474671 /locus_tag="Acear_0434" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the ABC transporter OpuCA. OpuCA is the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing...; Region: CBS_pair_ABC_OpuCA_assoc2; cd04583" /db_xref="CDD:73083" gene 474701..475528 /locus_tag="Acear_0435" /db_xref="GeneID:9512450" CDS 474701..475528 /locus_tag="Acear_0435" /note="COGs: COG4176 ABC-type proline/glycine betaine transport system permease component; InterPro IPR000515; KEGG: mac:MA2146 glycine betaine/L-proline ABC transporter, permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B1BAC8 glycine betaine transport system permease protein opuAB; PFAM: Binding-protein-dependent transport system inner membrane component" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_003827046.1" /db_xref="GI:302391226" /db_xref="GeneID:9512450" /translation="MNLPIGKGVELLLDVLLNNFGPFFEIVSNLVEQFMTGFTNLLLV APPLVVILALTGLALLIADKKVAFFSFIGLFVVFGMGLWVATIRTFVLVFVAAVIALA LGIPTGILINKSQLLNRIITPILDFMQTMPPFVYLIPATMFFGIGNVPGVMATVIFAM PPAIRLTDLGLKQVPDELEEVGFAFGSTPWQMLFKVRLPLALPSIMAGINQCIMLSLS MVVIASMIGAKGLGAEVLNGIQRMQIGVGFEAGLGVVILAIILDRITKGLNQVNAEQ" misc_feature 475010..475483 /locus_tag="Acear_0435" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(475016..475021,475034..475036,475061..475072, 475076..475105,475112..475117,475121..475123, 475169..475174,475178..475180,475184..475186, 475193..475198,475202..475204,475214..475219, 475226..475228,475277..475279,475319..475324, 475331..475333,475352..475363,475370..475375, 475412..475417,475445..475450,475457..475462, 475466..475471,475478..475483) /locus_tag="Acear_0435" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(475079..475123,475352..475369) /locus_tag="Acear_0435" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(475121..475123,475154..475156,475370..475372, 475406..475408,475415..475417,475445..475447) /locus_tag="Acear_0435" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(475229..475267,475283..475288,475298..475300) /locus_tag="Acear_0435" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 475633..476475 /locus_tag="Acear_0436" /db_xref="GeneID:9512451" CDS 475633..476475 /locus_tag="Acear_0436" /note="COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: drt:Dret_2271 substrate-binding region of ABC-type glycine betaine transport system; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SPTR: B1BAC7 glycine betaine-binding protein; PFAM: Substrate binding domain of ABC-type glycine betaine transport system" /codon_start=1 /transl_table=11 /product="glycine/betaine ABC transporter substrate-binding protein" /protein_id="YP_003827047.1" /db_xref="GI:302391227" /db_xref="GeneID:9512451" /translation="MLQSPQQTSQDESVEQKGKVKIGYVQWASAEASTYVVREVLERM GYEVETPVTQSGPMFQGTANGELDAFVCAWLPNTDKTRWEEYGDELVDLGSNYDSAQI GLVVPEYVKADTIPELKKYADKFNKAIVGIDPGATEMTVIENKTMPKYGLKDWELTSS SGPAMTAELGKAIKNDEWIVVAGWKPHWKWSKWDLKFLEDPELTMGEGEYIKSIGRPE IKEDMPTVAKFLQNYKLTTEQLGSIMLKIQNGMEPKKAAEEFVSNNPEAVNSWVPGDK EVVK" misc_feature 475633..476463 /locus_tag="Acear_0436" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature 475684..476421 /locus_tag="Acear_0436" /note="Substrate binding domain of ABC-type glycine betaine transport system; Region: OpuAC; pfam04069" /db_xref="CDD:146609" gene 476562..477515 /locus_tag="Acear_0437" /db_xref="GeneID:9512452" CDS 476562..477515 /locus_tag="Acear_0437" /note="COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR008162:IPR007210; KEGG: nth:Nther_0889 substrate-binding region of ABC-type glycine betaine transport system; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SPTR: B2A8A8 Substrate-binding region of ABC-type glycine betaine transport system; PFAM: Substrate binding domain of ABC-type glycine betaine transport system; TIGRFAM: choline ABC transporter, periplasmic binding protein" /codon_start=1 /transl_table=11 /product="glycine/betaine ABC transporter substrate-binding protein" /protein_id="YP_003827048.1" /db_xref="GI:302391228" /db_xref="GeneID:9512452" /translation="MISKKGRIILAVCLVLTLTVVGCTQQKQASNQAEQTEEIKFGYV NWPGVTVKTEVVKQVLETIGYKVTTESLGQQVLFKGMDNDEIDAFLGNWMPTMMTNFK PYKEKGTIVNIKPNVEKAVYKLAVPEYVWEAGVKSISDLHKHADKFDHEIVGLEAGND GNEIMKEAIENNTYNLEDWKVVASSTGGMLSAVERATKTGEWIAFPGWEPHWMNVKYD IKYLEDPENIWGESSTIYTAARPELEEESPNFYKFLENFEITSQIQSKWILEYQKKER PAEEAAEEWIKNNIDVISSWLDGVKTVDGKDAVKVIKNKFK" misc_feature 476646..477476 /locus_tag="Acear_0437" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature 476658..477500 /locus_tag="Acear_0437" /note="choline ABC transporter, periplasmic binding protein; Region: ABC_choline_bnd; TIGR03414" /db_xref="CDD:188316" gene 477634..478497 /locus_tag="Acear_0438" /db_xref="GeneID:9512453" CDS 477634..478497 /locus_tag="Acear_0438" /note="COGs: COG4176 ABC-type proline/glycine betaine transport system permease component; InterPro IPR000515; KEGG: nth:Nther_1621 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B2A4M0 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_003827049.1" /db_xref="GI:302391229" /db_xref="GeneID:9512453" /translation="MNLIPLVSTLDKLINFLSTKIPLGNAVEAIVDFIISNFSVPLNT FSEIISSLIGGFEAVLSYGHPFLLIAVFAIAAWKLKGKNMAVFVALGLMLVLNLRMWD PLVTTMASIITSVVVCLILGIPIGILKARSRIIDLITRPMLDFMQTIPPFVYLIPALM FFGLGNVSGVIATVVFAIAPPIRLTYLGIKQVSDELKEAGRAFGCTPWQMLYKIELPL ALPSIMMGVNQCIMLSLSMVVIAAMIGAGGLGKPVLRSLSTVDIGLGFEAGLGVVILA MILDRIFGREQ" misc_feature 477829..478488 /locus_tag="Acear_0438" /note="phosphonate ABC transporter, permease protein PhnE; Region: PhnE; TIGR01097" /db_xref="CDD:188108" misc_feature 477943..478470 /locus_tag="Acear_0438" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(477991..477996,478003..478008,478021..478023, 478048..478059,478063..478092,478099..478104, 478108..478110,478156..478161,478165..478167, 478171..478173,478180..478185,478189..478191, 478201..478206,478213..478215,478264..478266, 478306..478311,478318..478320,478339..478350, 478357..478362,478399..478404,478432..478437, 478444..478449,478453..478458,478465..478470) /locus_tag="Acear_0438" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(478066..478110,478339..478356) /locus_tag="Acear_0438" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(478108..478110,478141..478143,478357..478359, 478393..478395,478402..478404,478432..478434) /locus_tag="Acear_0438" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(478216..478254,478270..478275,478285..478287) /locus_tag="Acear_0438" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 478709..479362 /locus_tag="Acear_0439" /db_xref="GeneID:9512454" CDS 478709..479362 /locus_tag="Acear_0439" /note="COGs: COG5012 cobalamin binding protein; InterPro IPR006158:IPR003759; KEGG: dth:DICTH_0565 trimethylamine corrinoid protein 2; PFAM: cobalamin B12-binding domain protein; methionine synthase B12-binding module cap domain protein; SPTR: B5YD39 Trimethylamine corrinoid protein 2; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, methanosarcina family; methylmalonyl-CoA mutase C-terminal domain" /codon_start=1 /transl_table=11 /product="cobalamin B12-binding domain protein" /protein_id="YP_003827050.1" /db_xref="GI:302391230" /db_xref="GeneID:9512454" /translation="MTEFEAISNHIINGNEDKVAELTQKAIDEGLEPNDIIQKGLING MNQVSQKFKDEDMFVPEVMISAQAMKTGIELVNPLLTKEETSLKGRVLLGTVAGDLHN IGKNLVRIMMESAGFEVIDLGTDVEPKEFAEAVKEYKPDILGMSALLTTTIQQMQKTM GALKKEELRDSVKIMVGGGPVTPDFAEEINADFWAQDAVAAKSAALELVESSPPPKL" misc_feature 478718..479335 /locus_tag="Acear_0439" /note="Predicted cobalamin binding protein [General function prediction only]; Region: COG5012" /db_xref="CDD:34617" misc_feature 478739..479329 /locus_tag="Acear_0439" /note="B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or...; Region: corrinoid_protein_B12-BD; cd02070" /db_xref="CDD:30208" misc_feature order(479000..479020,479027..479029,479138..479146, 479150..479158,479243..479245,479291..479293, 479300..479302,479309..479311) /locus_tag="Acear_0439" /note="B12 binding site [chemical binding]; other site" /db_xref="CDD:30208" misc_feature 479009..479011 /locus_tag="Acear_0439" /note="cobalt ligand [ion binding]; other site" /db_xref="CDD:30208" gene 479477..479668 /locus_tag="Acear_0440" /db_xref="GeneID:9512455" CDS 479477..479668 /locus_tag="Acear_0440" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827051.1" /db_xref="GI:302391231" /db_xref="GeneID:9512455" /translation="MGEGELRVFKYNEGDKDELQELIVNKKRELDRKEKALSRIDSKV VNSKLEKSTGLFKALKSFR" gene 479842..481626 /locus_tag="Acear_0441" /db_xref="GeneID:9512456" CDS 479842..481626 /locus_tag="Acear_0441" /note="COGs: COG3829 transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR009057:IPR000014:IPR003593:IPR 013767:IPR002197; KEGG: amt:Amet_4666 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; SPTR: A6TX18 Sigma54 specific transcriptional regulator, Fis family; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box" /codon_start=1 /transl_table=11 /product="PAS modulated sigma54 specific transcriptional regulator, Fis family" /protein_id="YP_003827052.1" /db_xref="GI:302391232" /db_xref="GeneID:9512456" /translation="MTKLKELKKFIQQIANAFAAVMDYEIGILDDEVEIVAGTGKYKE IVNSRVGSGCITDRLISNSNSKSFFVEDTDSNDLCNRCQFKKECPVLAVVISPIKFSG QVVGTFALMAFDETQRQNLITNRSNLITFSEKVADFLSSTLAEKEMRKQMGILADQFK AVINSVHEGIIAINAQGNITHINQSATEVLKLNQVQTGKNIKSFFPELNLERIFSDSI MKNDYCETKLKYKQGEEEFELLCNITLIKNNEQVIGATISFRGLEEMKQLATKIIAED QQSAFDKIKGTSNEIINLKKQMHKVAQTSSTVLICGESGTGKGMFARAIHEESDRKEE AFISVNCAAIPENLLESELFGYEEGAFTGAKKGGKPGKFELAHKGTIFLDEIGDMPLH FQVKLLKVIEDKKLERVGGVESIDIDVRIIAATHQDLKKMVKEGKFRKDLFYRLNVIP FSIPPLRERKEDILLLSHFFLQRYSHLLGKDIEGFTEGAKQKLLNYSWPGNIRELENS IEYAVNIATSNYITEKYLPETILESFSGNEETSVVPTLNEVERKTIIKALQEFGTSGK GKEKAAEALGIGRSTLYRKLDDYNIELS" misc_feature <480304..>480648 /locus_tag="Acear_0441" /note="sensory histidine kinase DcuS; Provisional; Region: PRK11086" /db_xref="CDD:182952" misc_feature 480310..480480 /locus_tag="Acear_0441" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature 480697..481572 /locus_tag="Acear_0441" /note="psp operon transcriptional activator PspF; Region: phageshock_pspF; TIGR02974" /db_xref="CDD:163093" misc_feature 480748..481206 /locus_tag="Acear_0441" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 480775..480798 /locus_tag="Acear_0441" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(480778..480801,480991..480993,481117..481119) /locus_tag="Acear_0441" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 480979..480996 /locus_tag="Acear_0441" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 481174..481176 /locus_tag="Acear_0441" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 481474..481608 /locus_tag="Acear_0441" /note="Bacterial regulatory protein, Fis family; Region: HTH_8; cl01091" /db_xref="CDD:186327" gene 482013..483416 /locus_tag="Acear_0442" /db_xref="GeneID:9512457" CDS 482013..483416 /locus_tag="Acear_0442" /note="COGs: COG5598 Trimethylamine:corrinoid methyltransferase; InterPro IPR010426; KEGG: dsy:DSY3648 hypothetical protein; PFAM: trimethylamine methyltransferase; SPTR: Q24MI3 Trimethylamine methyltransferase mttB; PFAM: Trimethylamine methyltransferase (MTTB)" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase" /protein_id="YP_003827053.1" /db_xref="GI:302391233" /db_xref="GeneID:9512457" /translation="MRPKLNFFSEEEIERIHNMSLDILESMGMKIPSEEALGILEEAG ADIDGEIAKFTPELIENAVETAPKRDELTLYARDEEYDINLSEDAPVLAGMTQATNVI DVDTREKRPATNEDVGLMLRVLDQLDNVSIASTLATPQDVPEERMDQYTWATAIKNTK KHITAPSFNDQCVKDAVKMGSIAVGGEDKFQERPFFSTWVLTSPPLELDAETASTLME ASRHNIPTLVSSGPILGVSAPVTIAGGVAQAHAENMACLVLSQAVNPGAPFIYTSFAR IMDMKVTNISMASPEFAIMKGCMAELGHLLDLPTRMPSMLRDSKKVDAQAGFEVGMGL VGALESEIIGGLQLDMDIVIDFADLVFSNECMGQLKRIARGVEVNDNNLARELISEVG HGGDFLKTLHTAQNFKDELWDADLVERRMWEYWEDDGCLDMEERALARVKEMIEEDTG PLLDEELQKEIDAIAKD" misc_feature 482034..483410 /locus_tag="Acear_0442" /note="Trimethylamine methyltransferase (MTTB); Region: MTTB; cl02383" /db_xref="CDD:174723" gene 483463..485070 /locus_tag="Acear_0443" /db_xref="GeneID:9512458" CDS 483463..485070 /locus_tag="Acear_0443" /note="COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: bce:BC5443 glycine betaine transporter; PFAM: BCCT transporter; SPTR: C2XJZ4 glycine betaine transporter; PFAM: BCCT family transporter" /codon_start=1 /transl_table=11 /product="glycine/betane ABC transporter" /protein_id="YP_003827054.1" /db_xref="GI:302391234" /db_xref="GeneID:9512458" /translation="MADEVSVEEKSEINWRVFGLSGGFFVLFVIASIINLDAVSSVVD ACFNWSISWFGAFWQVLVLLTFIIAVLLGISKYGSVRLGGDEPEINTFNWIAMIMCAL LAGGGVFWSAAEPMYHFLDTPAFFSGSGVESATAAAVNPAFSYSFLHWGFLAWAILGT LGTIVLMDGVYRKELPLQPRSLLYPVVGENGVFGLLGDLADITSILAVAAGTIGPIGF LGLQLSYALEKVLGIPDVFMTQLGVILAFTAFYTITAILGLEDGIQKLSDFTARFTLL CGLVILIFGPGSFIINHFLSGYGTYLDNFFSISLFRGDANWLSWWTSFFWAWFIGYAP MMAIFVARISRGRTIREIILAVAVISPVVTNFWFSIVGGTGIFYELQNPGVISESLNS SGMAAALLDIIEMVPYIGPNILMAAILYLIVGFLATTGNSMAYTMSMVVTAEDVPPKW VRAFWSIAMGAVAAILMKIGGVNALQRFIVVTAVPVSVFMIPTLWAAPKTAAELYEKQ NNTVTTSSVPKDSLDVELTEETEEVTN" misc_feature 483550..484971 /locus_tag="Acear_0443" /note="BCCT family transporter; Region: BCCT; cl00569" /db_xref="CDD:189118" gene 485098..485736 /locus_tag="Acear_0444" /db_xref="GeneID:9512459" CDS 485098..485736 /locus_tag="Acear_0444" /EC_number="2.1.1.13" /note="COGs: COG5012 cobalamin binding protein; InterPro IPR006158:IPR003759:IPR012741; KEGG: dth:DICTH_0565 trimethylamine corrinoid protein 2; PFAM: cobalamin B12-binding domain protein; methionine synthase B12-binding module cap domain protein; PRIAM: methionine synthase; SPTR: B5YD39 Trimethylamine corrinoid protein 2; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, methanosarcina family; methylmalonyl-CoA mutase C-terminal domain" /codon_start=1 /transl_table=11 /product="methyltransferase cognate corrinoid protein" /protein_id="YP_003827055.1" /db_xref="GI:302391235" /db_xref="GeneID:9512459" /translation="MRMGEFKEITEAVINGEIEKVGELAQELVDAGKEPSKIIKEGFV AGMDIVGERFKNQDMFVPEVLLSAKSMHAGMDIVKPLLSDADSSSEGTVVIGTVEGDL HDIGKNLVIMMIEGAGYEVIDLGIDLPAEEIVEAVKEHQPDVIGLSALLTTTMPAMEN TVEALEEAGVKDDIKVIVGGAPVNQEFADEIGADGYAPDGSTATDLVREMTN" misc_feature 485119..485706 /locus_tag="Acear_0444" /note="methyltransferase cognate corrinoid proteins, Methanosarcina family; Region: pyl_corrinoid; TIGR02370" /db_xref="CDD:131423" misc_feature 485128..485724 /locus_tag="Acear_0444" /note="B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or...; Region: corrinoid_protein_B12-BD; cd02070" /db_xref="CDD:30208" misc_feature order(485395..485415,485422..485424,485533..485541, 485545..485553,485638..485640,485686..485688, 485695..485697,485704..485706) /locus_tag="Acear_0444" /note="B12 binding site [chemical binding]; other site" /db_xref="CDD:30208" misc_feature 485404..485406 /locus_tag="Acear_0444" /note="cobalt ligand [ion binding]; other site" /db_xref="CDD:30208" gene 485826..486623 /locus_tag="Acear_0445" /db_xref="GeneID:9512460" CDS 485826..486623 /locus_tag="Acear_0445" /EC_number="2.1.1.13" /note="COGs: COG1410 methionine synthase I cobalamin-binding domain; InterPro IPR000489:IPR011005; KEGG: mta:Moth_2115 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; PFAM: dihydropteroate synthase DHPS; PRIAM: methionine synthase; SPTR: Q2RGN2 5-methyltetrahydrofolate--homocysteine S-methyltransferase; PFAM: Pterin binding enzyme" /codon_start=1 /transl_table=11 /product="methionine synthase" /protein_id="YP_003827056.1" /db_xref="GI:302391236" /db_xref="GeneID:9512460" /translation="MIVIGELINTSREEVEPAVKNRNVDFIQELAKKQEEAGADYIDV NCGTLIKEEVEAMEWLVKTVQEVVDVPLCIDSPDPKALKKGLETCEKRPMINSITAEK ERYEEILPLIQEYDAEIVALAMDESGMPEDDQDRINVATKLIDDLVADGVELEDIYLD PIIQPIGTDEEMGEYILAAIDEIITKYEDVHITCGLSNISHGLPKRQLLNQAFVVLAM SRGMDSAIMDPLDEKIMSLTIASDTLLGEDQYCANYIKAAKGDKLVI" misc_feature 485826..486509 /locus_tag="Acear_0445" /note="Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a...; Region: Pterin_binding; cl00219" /db_xref="CDD:197403" misc_feature order(485850..485852,486048..486050,486111..486113, 486117..486119,486189..486191,486303..486305, 486408..486410,486420..486422,486501..486503, 486507..486509) /locus_tag="Acear_0445" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29544" misc_feature order(486345..486347,486357..486359,486459..486461, 486471..486473,486483..486485) /locus_tag="Acear_0445" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29544" misc_feature 486414..486422 /locus_tag="Acear_0445" /note="inhibitor binding site; inhibition site" /db_xref="CDD:29544" gene 486732..488687 /locus_tag="Acear_0446" /db_xref="GeneID:9512461" CDS 486732..488687 /locus_tag="Acear_0446" /note="COGs: COG0840 methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004010; KEGG: bbe:BBR47_16050 probable methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: C0Z9B2 Probable methyl-accepting chemotaxis protein; PFAM: Cache domain; HAMP domain; methyl-accepting chemotaxis protein (MCP) signaling domain" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer with Cache sensor" /protein_id="YP_003827057.1" /db_xref="GI:302391237" /db_xref="GeneID:9512461" /translation="MEDIMEKIRQSLNSLSTKLIILFLLIGLAPMVILSYFQIQETEE ELRQSFIRSSTSEIKHVDNTINMYFKKIKEDCKMLAENANVKKADKTITSYVDKTKDE ELQMTPSQNSGIEADIYQVYSNYAENHSNLVYTYLATKHGGFIQWPEGPITANYDPRV RPFYKAAMNNKDKVIRTKPYYWEGDDVSLMSTATVVRDDVGEIIGVQVVDIGLENLTD MIENIHIKKKGYIIMTTNDGTILAHPKNRNLNFKNINELGVDKLNNLTNLKEESFTAR MNNKDYLMNIYTSPQTGWKFIAVIEKEVLNERVSSLYNKTLWMGLIAAVIIIIITLFV SRRFSQPIVAATEFAQQIAQGNLDIKLLNNKSTGEIGDLIQALNKMRDDLKEMLLNLM DVIEDLSAYSQELSASSEEGNAVIEQNTENIEEMTTSIQQISASSQEVTNLAQETNAQ SEVGKEKIEEIANVEEVSRVVNNAVESIEELDTNSKEIGKIVELISNIAEQTNMLALN AAIEAARAGEQGQGFAVVADEIRQLAEETTQATTEIDELIKDTQNKSKISLKTVQQME DKVKNRKQALEETNEVFTKIKQRIEDTSAHIQQTAASAQNLAENSDQVQQASEDMRNM SQEVTNSSQELANMAQKLQELITDFNI" misc_feature 487260..487472 /locus_tag="Acear_0446" /note="Cache domain; Region: Cache_1; pfam02743" /db_xref="CDD:145738" misc_feature 487680..487889 /locus_tag="Acear_0446" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 487920..488678 /locus_tag="Acear_0446" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 488124..488684 /locus_tag="Acear_0446" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 489096..490043 /locus_tag="Acear_0447" /db_xref="GeneID:9512462" CDS 489096..490043 /locus_tag="Acear_0447" /note="COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); InterPro IPR011611; KEGG: tpt:Tpet_0099 ribokinase-like domain-containing protein; PFAM: PfkB domain protein; SPTR: A5IIV5 PfkB domain protein; PFAM: pfkB family carbohydrate kinase" /codon_start=1 /transl_table=11 /product="PfkB domain protein" /protein_id="YP_003827058.1" /db_xref="GI:302391238" /db_xref="GeneID:9512462" /translation="MITTVTLNPAIDREYFVKNNTPGYHQYIYENQQINVSPGGKGLV SAIDLKYLGYSDVQNIGFVGGQQGLFFEKMVQEYKITTNYIYTEEEMRNNIYIIGKEP VTYTHYNDYTYRVESSDVERLLKRFKRSITDSDLIIISGSIPEGVSFSIYQDLISICQ QKGKKVYLFASGKALNRALQESPHFVVPYFKHSNKILEEKVELLEDYIRVGKKLQEMG VKHVSIPFHGKRLIFGENKVYSISAEYFRLMNWLGAGEAYNAAFFDHMLREGFDIIET NRYAGAAALAVSEKKEVFLKSRSEIEDKLELINIKEVTL" misc_feature 489096..490034 /locus_tag="Acear_0447" /note="Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]; Region: FruK; COG1105" /db_xref="CDD:31302" misc_feature 489096..489974 /locus_tag="Acear_0447" /note="1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose...; Region: FruK_PfkB_like; cd01164" /db_xref="CDD:29349" misc_feature order(489231..489233,489243..489245,489264..489266, 489270..489272,489513..489515) /locus_tag="Acear_0447" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:29349" misc_feature order(489600..489602,489654..489656,489660..489662, 489768..489770,489783..489785,489855..489857, 489861..489863) /locus_tag="Acear_0447" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:29349" gene 490048..490500 /locus_tag="Acear_0448" /db_xref="GeneID:9512463" CDS 490048..490500 /locus_tag="Acear_0448" /note="InterPro IPR000644; KEGG: tle:Tlet_1060 signal transduction protein; PFAM: hypothetical protein; SPTR: A8F641 Putative signal transduction protein with CBS domains; PFAM: CBS domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827059.1" /db_xref="GI:302391239" /db_xref="GeneID:9512463" /translation="MSTVKKYMMRSLNSVSKEDTVKEVIRAMHKIEMSVLPVVDEENT FLGSIYSENILRNIIPEQYGMLESHRLLHEINQAAENLKEIKDNKIKEYMLTNTSVVK EMDNMDNLADIMLHNEESYLFVVNEEGKLRGYISRGDLLYYLSEVEEN" misc_feature 490057..490470 /locus_tag="Acear_0448" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature 490087..490476 /locus_tag="Acear_0448" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair; cd02205" /db_xref="CDD:73081" gene 490553..491857 /locus_tag="Acear_0449" /db_xref="GeneID:9512464" CDS 490553..491857 /locus_tag="Acear_0449" /note="COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153; KEGG: cbh:CLC_2648 monovalent cation:proton antiporter-2 (CPA2) family protein; PFAM: sodium/hydrogen exchanger; SPTR: A7FPZ0 transporter, monovalent cation:proton antiporter-2 (CPA2) family; PFAM: Sodium/hydrogen exchanger family" /codon_start=1 /transl_table=11 /product="sodium/hydrogen exchanger" /protein_id="YP_003827060.1" /db_xref="GI:302391240" /db_xref="GeneID:9512464" /translation="MTGEIIEGLHQIQEWFVLNQVGDKVIYLIGLLIFLAWLVVLIAK KTKIPIVVGYVFLGIILSVELINQLPFLTEAQKSWYEFLIESFDYIPQLALAFIAFTI GSELSIKVLKNLGKKILYVVVLEAFGAFILVTLGILAIGQPLYLALLFGSIASATAPA ATVMVLKEYDAEGVLTSMILAVVGIDDAVALIIFSLIKPIALMLYSGNSNLSLVNSIL LPLIEIGGSIGIGLLLGYLSQKVLVGFEDKTKKVMTVITTIVGGSAVAILIELSPLIT NMAIGFAYRNFTHKNLGVTDYLDTLTIPLYALFFILAGTEIRFTGIASVGFLIVAFTY TIARLIGKIGGASLGASLSNAPEKIKKYVGFGLLPQSGVAIALAYTVQKSFSEAPEVG LLVFNTLLFTSALTEVFGPLATKYAISQAGEAQQEVKHDQST" misc_feature 490625..491827 /locus_tag="Acear_0449" /note="Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]; Region: KefB; cl10482" /db_xref="CDD:164194" misc_feature 490637..491779 /locus_tag="Acear_0449" /note="Sodium/hydrogen exchanger family; Region: Na_H_Exchanger; pfam00999" /db_xref="CDD:189798" gene 492600..494033 /locus_tag="Acear_0450" /db_xref="GeneID:9512465" CDS 492600..494033 /locus_tag="Acear_0450" /note="COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: amt:Amet_0696 anion transporter; PFAM: sodium/sulphate symporter; SPTR: A6TL53 Anion transporter; TIGRFAM: anion transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter" /codon_start=1 /transl_table=11 /product="anion transporter" /protein_id="YP_003827061.1" /db_xref="GI:302391241" /db_xref="GeneID:9512465" /translation="MEAVYDSMTKMFNKKNIKNIIVYLICISILFIVHVTSPAGLSQV GFKMLGIAVISALLWSTDAAPIPITALIIIFLQTILGVADLNEVLKYIAHPVNALLFV GFSLSAGLQKYNLDKKISIKIIEYAGTNVKKLILSVMCVVAVLSMWMSNTSTTAIMIP IAASILRMAKGEHKNIGKAFMIGIAYAGTIGGMATPVGTTPNPITIGFLQEMAGISLT FLDWVAIGLPFAVVLVPLAWFLLTWIYPPEVEEVDVVDISSLDDDQGETDQLGVNKFL FYFGLIVVLWLSGSFLPVPDGWLYIVSLGGSIVLYLPLFGVLEWKDAEESVDWGVLIL IGGGLALGSGLSSTGVISWIIGFFEQGIQGLPISLVAILVAALTSISILFFCSITATS TAFVPLAITLAMQIDANPIILAAAAGLASSFAYLLPANTPPNAIAYTEGYFETKDMIK SGVILLVLSIIVFAVISQVLWPFMFQF" misc_feature 492744..494012 /locus_tag="Acear_0450" /note="Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is...; Region: SLC13_permease; cd01115" /db_xref="CDD:73247" misc_feature order(492765..492776,492795..492836,492879..492932, 493002..493052,493056..493109,493131..493202, 493266..493310,493323..493331,493440..493469, 493491..493535,493578..493634,493707..493739, 493743..493757,493809..493868,493956..493994) /locus_tag="Acear_0450" /note="transmembrane helices; other site" /db_xref="CDD:73247" gene 494064..495161 /locus_tag="Acear_0451" /db_xref="GeneID:9512466" CDS 494064..495161 /locus_tag="Acear_0451" /EC_number="2.7.2.7" /note="COGs: COG3426 Butyrate kinase; InterPro IPR000890:IPR011245; KEGG: rde:RD1_0841 butyrate kinase; PFAM: acetate and butyrate kinase; SPTR: Q16BX9 Butyrate kinase; TIGRFAM: butyrate kinase; PFAM: Acetokinase family; TIGRFAM: butyrate kinase" /codon_start=1 /transl_table=11 /product="butyrate kinase" /protein_id="YP_003827062.1" /db_xref="GI:302391242" /db_xref="GeneID:9512466" /translation="MENIEIIFTVNPGATSTKCALYQLVDNEIDCIAEEAINHPDEEI VEFDSVSDQVDYREELVRQFIDQSLPQQGEIIACAGRGGMLTPVPSGAIKVNDELVDF CLNDPVYYHASNLGAPLAYRVANTYGIEAFIVDPVAVDELTEVARVSGCKDFPRFSFV HALNVRATVRKLAEKLGKDFEDMKCVTAHLGGGFSIAAIDQGRIVDNDNRMEGGPFTP ERAGGVPPIPLVEACFSGDYTKEELMKKLYGEGGVYGYLGTKDMREVVKRVEDGDEYA TLIYDAMIYQICKEIAAMASVVSFDLDGIVVTGGLAYSDKIIADIKAKVSKLGQVYVY PGSNESEALAATAARVINGEEYREWPVEVSN" misc_feature 494076..495152 /locus_tag="Acear_0451" /note="Acetokinase family; Region: Acetate_kinase; cl01029" /db_xref="CDD:194013" gene 495196..496119 /locus_tag="Acear_0452" /db_xref="GeneID:9512467" CDS 495196..496119 /locus_tag="Acear_0452" /EC_number="2.3.1.19" /note="COGs: COG0280 phosphotransacetylase; InterPro IPR012147:IPR002505; KEGG: rde:RD1_0842 phosphate butyryltransferase, PFAM: phosphate acetyl/butaryl transferase; PRIAM: phosphate butyryltransferase; SPTR: C0CQB5 Putative uncharacterized protein; PFAM: phosphate acetyl/butaryl transferase" /codon_start=1 /transl_table=11 /product="phosphate butyryltransferase" /protein_id="YP_003827063.1" /db_xref="GI:302391243" /db_xref="GeneID:9512467" /translation="MAIKTFEELKEAVVKLEPIRVAVAAAGDEKVVGGVKLAQELGII KEPVLTGDAEKIKEIVDAQEAEVTADNIRDAVDDSQAARLAVKAVNDGEVQALAKGRL ETLHYLRAILDKETGIRAAKVLNNLTLFEMDSYHKLVGVSDNAIMPNPDLEDKKAIIE NTKPLWTALGIEQPKAAVLAAVEIVNDKMQATVDGCCLTRMVDRGQIKDFIVDGPLSY DIAMSLECAKGKNLADSKVAGDPDLLVLPNLESANMLGKSYKLHGKAESGGLVFGAEV PVMLNSRSDSAERRLNAILMARAIAEKTSLV" misc_feature 495202..496104 /locus_tag="Acear_0452" /note="Phosphate acetyl/butaryl transferase; Region: PTA_PTB; cl00390" /db_xref="CDD:193798" misc_feature 495208..496107 /locus_tag="Acear_0452" /note="Phosphotransacetylase [Energy production and conversion]; Region: Pta; COG0280" /db_xref="CDD:30628" gene 496153..496353 /locus_tag="Acear_0453" /db_xref="GeneID:9512468" CDS 496153..496353 /locus_tag="Acear_0453" /note="InterPro IPR017900:IPR017896:IPR001450; KEGG: tme:Tmel_1897 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8RJL5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003827064.1" /db_xref="GI:302391244" /db_xref="GeneID:9512468" /translation="MAKVLIDHELCKKCKICVEFCPMDVYSFNELEGPKVEQEEKCIG CDKCVIMCPDFAVEVIEGEEVK" misc_feature <496153..496341 /locus_tag="Acear_0453" /note="RPB11 and RPB3 subunits of RNA polymerase; Region: RNAP_RPB11_RPB3; cl11409" /db_xref="CDD:196219" misc_feature 496156..496350 /locus_tag="Acear_0453" /note="Ferredoxin [Energy production and conversion]; Region: COG1146" /db_xref="CDD:31341" gene 496353..497477 /locus_tag="Acear_0454" /db_xref="GeneID:9512469" CDS 496353..497477 /locus_tag="Acear_0454" /EC_number="1.2.7.3" /note="COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR015941:IPR009014:IPR002880:IPR005476; KEGG: gsu:GSU1468 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; transketolase domain protein; SPTR: A8RJL6 Putative uncharacterized protein; PFAM: domain; transketolase, C-terminal domain" /codon_start=1 /transl_table=11 /product="2-oxoglutarate ferredoxin oxidoreductase, alpha subunit" /protein_id="YP_003827065.1" /db_xref="GI:302391245" /db_xref="GeneID:9512469" /translation="MSNKSQEKQAFMQGNIAAGEGAIAAGADVFAGYPITPSSEIAQH ASVNLPKLGGMYVQMEDEIGSISAVVGASMAGAKTYTATSGPGISLMNENIGLACMVE APCVIINVQRVGPSTGLATKPAQGDLMQTRWGTHGDHGVIAVSPASVQECFDLTVQAF NFAERFRTPVFVLMDGLVGQMYETITIPEEVEIEDRKLADCPPEEFEPYAYDEDLVPS FAPYGGERINKANGSGHGLDGYPDNSPENYDMLVNRLVDKIENKKEEICLYETYQCED AEVLIITYGCSVRSGLTAVEKAREEGIKAGLLQLKTVWPFPDHLVKEYSAQVDKVIVP ELSLGQLKAEVNKYVNDVPVIGVNKNVGLPITPQEIIAEM" misc_feature 496374..497474 /locus_tag="Acear_0454" /note="2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated; Region: PRK08659" /db_xref="CDD:181526" misc_feature 496434..496880 /locus_tag="Acear_0454" /note="Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins; Region: TPP_PYR_PFOR_IOR-alpha_like; cd07034" /db_xref="CDD:132917" misc_feature order(496437..496442,496458..496460,496470..496472, 496479..496481,496521..496532,496551..496556, 496560..496568,496575..496577,496581..496583, 496632..496634,496641..496643,496653..496655, 496692..496697,496746..496751) /locus_tag="Acear_0454" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132917" misc_feature order(496437..496442,496449..496454,496458..496460, 496476..496481,496521..496532,496551..496556, 496560..496568,496575..496577,496581..496583, 496632..496634,496641..496643) /locus_tag="Acear_0454" /note="PYR/PP interface [polypeptide binding]; other site" /db_xref="CDD:132917" misc_feature order(496452..496454,496536..496538) /locus_tag="Acear_0454" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132917" misc_feature order(496458..496460,496686..496688) /locus_tag="Acear_0454" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:132917" misc_feature 497169..497459 /locus_tag="Acear_0454" /note="Transketolase, C-terminal domain; Region: Transketolase_C; pfam02780" /db_xref="CDD:145764" gene 497493..498311 /locus_tag="Acear_0455" /db_xref="GeneID:9512470" CDS 497493..498311 /locus_tag="Acear_0455" /EC_number="1.2.7.3" /note="COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: nth:Nther_1483 2-oxoglutarate ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: A8RJL7 Putative uncharacterized protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain" /codon_start=1 /transl_table=11 /product="2-oxoglutarate ferredoxin oxidoreductase, beta subunit" /protein_id="YP_003827066.1" /db_xref="GI:302391246" /db_xref="GeneID:9512470" /translation="MEYTGEEFLKSEDLPLFWCAGCGHGILLGSIVRALEESGLSREN TVVVTGIGCWGKADDYLTTHAFHGTHGRAIGVATGVKFANPDLNVIALVGDGDGVTIG GNHLIHAARRNTDITVIMSNNLNYGMTGGQYSGSTPNEAITSTSPYGHVEDQFDISEL VKESGAGYVAKETVAKPLKLQKYISKALQKDAGFRFVEALSVCPTHFGKNNKLGGAVE MINHLDSNTVKLKAAQEMNSEELEDKYVIGEYADRDVDGYIKRYQEVQKNAANA" misc_feature 497517..498305 /locus_tag="Acear_0455" /note="2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated; Region: PRK05778" /db_xref="CDD:180253" misc_feature 497544..498110 /locus_tag="Acear_0455" /note="Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor. In the TCA cycle, OGFOR...; Region: TPP_OGFOR; cd03375" /db_xref="CDD:73355" misc_feature order(497700..497702,497772..497783,497859..497861, 497865..497867) /locus_tag="Acear_0455" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:73355" gene 498334..498870 /locus_tag="Acear_0456" /db_xref="GeneID:9512471" CDS 498334..498870 /locus_tag="Acear_0456" /note="COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752:IPR002869; KEGG: tsi:TSIB_1466 2-oxoglutarate ferredoxin oxidoreductase 2 (KGOR), subunit gamma; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: C6A4H2 2-oxoglutarate ferredoxin oxidoreductase 2 (KGOR), subunit gamma; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase" /codon_start=1 /transl_table=11 /product="Pyruvate/ketoisovalerate oxidoreductase" /protein_id="YP_003827067.1" /db_xref="GI:302391247" /db_xref="GeneID:9512471" /translation="MSKEQCEIILSGVGGQGLISSGAILGEAASVYEDKFTTMTKTYG VSARGGFSKSDVLISDEFVSYFKALNPDVILILDNKAYPEVKDKISEETLVIINSNEV DNYNPDLGNVYSFPLSEMAFEIGSLLTLNIIALGFIAGKTNIISKEALKKVVKKKYPA EKAVELNMKAIEKGFSLV" misc_feature 498352..498864 /locus_tag="Acear_0456" /note="2-oxoglutarate ferredoxin oxidoreductase subunit gamma; Validated; Region: PRK08537" /db_xref="CDD:181462" misc_feature 498352..>498768 /locus_tag="Acear_0456" /note="Pyruvate ferredoxin/flavodoxin oxidoreductase; Region: POR; cl00546" /db_xref="CDD:193862" gene 498924..499400 /locus_tag="Acear_0457" /db_xref="GeneID:9512472" CDS 498924..499400 /locus_tag="Acear_0457" /note="COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR012675:IPR006058:IPR001041:IPR002888; KEGG: pmo:Pmob_1739 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: A9BIU4 (2Fe-2S)-binding domain protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain" /codon_start=1 /transl_table=11 /product="purine hydroxylase delta subunit apoprotein" /protein_id="YP_003827068.1" /db_xref="GI:302391248" /db_xref="GeneID:9512472" /translation="MVNEIALTVNGTKYELAVKGHQTLADVLRDELGLIGTKVGCGEG ECGACTVMVDGRTVTSCLMLAAQADGCEIITIEGLAEDAEGELHPVQEAFVEAGAIQC GFCTPGFVMSTVALLEEYPDPTEEQIREGLAGNLCRCTGYQQIFDAVELAKEKREV" misc_feature 498936..499397 /locus_tag="Acear_0457" /note="Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]; Region: CoxS; COG2080" /db_xref="CDD:32263" misc_feature 498936..>499097 /locus_tag="Acear_0457" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature order(499032..499037,499044..499046,499053..499055, 499059..499070) /locus_tag="Acear_0457" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature order(499044..499046,499059..499061,499068..499070) /locus_tag="Acear_0457" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" misc_feature 499146..499376 /locus_tag="Acear_0457" /note="[2Fe-2S] binding domain; Region: Fer2_2; pfam01799" /db_xref="CDD:190116" gene 499404..501761 /locus_tag="Acear_0458" /db_xref="GeneID:9512473" CDS 499404..501761 /locus_tag="Acear_0458" /note="COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR000674:IPR008274:IPR013838; KEGG: reh:H16_B0743 4-hydroxybenzoyl-CoA reductase molybdopterin-binding subunit A; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; SPTR: Q0K384 4-Hydroxybenzoyl-CoA reductase,molybdopterin-binding subunit A; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain" /codon_start=1 /transl_table=11 /product="aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein" /protein_id="YP_003827069.1" /db_xref="GI:302391249" /db_xref="GeneID:9512473" /translation="MREISDELKEYREDYEKVGKDRPLVDAKDKVTGKARYVSDVELP GMLTAKALRSPYPHAKVLNIDKSKAEKVPGVKSILTPEDVEQQKWGPITQDRNLLSRK ARFTGDEIGLVVAVDEAACDEALSKIKVDYEQLPPVLDMLEAMDEDAPTIHEEFPNNV NHHVEVERVSEEEMERIFDEAYLVCEDEFVTNRVHQSYMEPNGVVAEQDENGYLTMYA GAQSPTWCRRDYAESLKMPVDKTKVVQTLYGGGFGAKIEPQFPPLGALGAKYVGQPVK LLLNRKEDFESALPRVPMTIRLKTAWSKEGELLAKDVYVIADQGAYADYGLAIAKTAM KRIDTLYQLENVRAVSDVVYTNKVPTGCFRGFGNSQSHIALENQVDEAAEKLGIAPDE LRLKNCARPGYDNPHGWEVNSCEVDQCIEEATQQSNFKEKRDEYKGAQKDNAKIKRGI GLSASMHVSGNRSFLKAFDGASALLRMNEDGRLYIYSNEPDMGQGIRTVTTVCAAEVL DMPIEDIRVPEVDTDVVPFGTGCWASRGTYLASSAVKEAALKLKRKLLAKAGEMMNIS AEQLKVKDGTVVWKRDENRKRTFKEIAWQYVCENSGEMLMAQGSFMPDVEYPDEDGYG NVSGGYAYACNVAEVEINTETGEINVTDIWAAYDVGQPINPMAVKGQICGGVGMGFGW AILEDMKYDEDGVLMNPNFLDYQIPTTKDIPNIHPIIADSYEWTSGYGAKSIGENALN PVAPAISNAIYNAIGVRFKEVPITSEKVLEKLQEEDAAVEKEGNQ" misc_feature 499455..501728 /locus_tag="Acear_0458" /note="xanthine dehydrogenase subunit XdhA; Provisional; Region: PRK09970" /db_xref="CDD:182174" misc_feature 499497..499811 /locus_tag="Acear_0458" /note="Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; Region: Ald_Xan_dh_C; pfam01315" /db_xref="CDD:144787" misc_feature 499932..501542 /locus_tag="Acear_0458" /note="Molybdopterin-binding domain of aldehyde dehydrogenase; Region: Ald_Xan_dh_C2; pfam02738" /db_xref="CDD:145733" gene 501761..502627 /locus_tag="Acear_0459" /db_xref="GeneID:9512474" CDS 501761..502627 /locus_tag="Acear_0459" /note="COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterProIPR016167:IPR016169:IPR005107:IPR016166:IPR 002346; KEGG: dka:DKAM_0739 molybdopterin dehydrogenase FAD-binding; PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; SPTR: B8D4N4 Molybdopterin dehydrogenase FAD-binding; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain" /codon_start=1 /transl_table=11 /product="molybdopterin dehydrogenase FAD-binding protein" /protein_id="YP_003827070.1" /db_xref="GI:302391250" /db_xref="GeneID:9512474" /translation="MRSFDYYRADTVDEAISLLQKFNGEAVLLAGGTDVIVEAKEEGV EFERVVDISRTDELRGISLEGDKIHIGAATKFYEIVDSEIVRENAGVLARAANKVGSV QTRNMGTIGGNVGNAAPSADSLPSLLILDAQVVVADPEGEKCVPVNEIFEGPGETVLN SLQMIKEIIIPCVPENTGMKYIKHMRRKAMDVATVGCAVRVGINPQSKKMTDVYIALG SVAPTPILVEGITDKAQGKKLDQDLAQEIGEFAMNQVSPITDVRSTKEYRNEMVKTLV KNALMEAYDNVI" misc_feature 501776..502609 /locus_tag="Acear_0459" /note="xanthine dehydrogenase subunit XdhB; Provisional; Region: PRK09971" /db_xref="CDD:182175" misc_feature 502298..502609 /locus_tag="Acear_0459" /note="CO dehydrogenase flavoprotein C-terminal domain; Region: CO_deh_flav_C; pfam03450" /db_xref="CDD:146206" gene 502713..503942 /locus_tag="Acear_0460" /db_xref="GeneID:9512475" CDS 502713..503942 /locus_tag="Acear_0460" /note="COGs: COG0167 Dihydroorotate dehydrogenase; InterProIPR013785:IPR017900:IPR017896:IPR005720:IPR 012135:IPR001450; KEGG: ate:Athe_2085 dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B9MLH2 Dihydroorotate dehydrogenase family protein; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: Dihydroorotate dehydrogenase; 4Fe-4S binding domain; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein" /codon_start=1 /transl_table=11 /product="dihydroorotate dehydrogenase family protein" /protein_id="YP_003827071.1" /db_xref="GI:302391251" /db_xref="GeneID:9512475" /translation="MKPDLSTEVCGVEFKNPIVVASATPTHDAEAMRKCVEAGAGGLV AKTFSPEPLTKEYVSPRFTVLHKEGWPDVYSNYSCEFLATFATDEWMKQMEEAAEYCH EHDVRLIGSISGTTMESWQDLAQRIEATGIDMLELNFGCPHPRDLDYKSGQVLGSSPE AAAEVTEAVVEVVDIPVFIKVTPEAVSPVEVTKRVTEAGAAGVTAINRYPALDIDIED GRPLLHSTYAGVGGPWMRPITLKWLSKISKEVGAPISATNGISTWKDIVKCIMVGAST VQTCTALMYGQNQYGKIEDFIEGLEDYMEDKGYDSLDELRGITLPQIKTWDEVDRESK ATPEVIPEECIGCGMCLNWCFYDAISLYEEDGETKAKVDPDKCDHCGLCVSLCPKEAL NMEYEDKDEKVYLGDFE" misc_feature 502722..503882 /locus_tag="Acear_0460" /note="dihydropyrimidine dehydrogenase subunit B; Validated; Region: PRK08318" /db_xref="CDD:181383" misc_feature 502722..503612 /locus_tag="Acear_0460" /note="TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate...; Region: TIM_phosphate_binding; cl09108" /db_xref="CDD:195791" misc_feature order(503484..503489,503550..503555) /locus_tag="Acear_0460" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:73384" misc_feature 503820..503888 /locus_tag="Acear_0460" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" gene 503977..504375 /locus_tag="Acear_0461" /db_xref="GeneID:9512476" CDS 503977..504375 /locus_tag="Acear_0461" /note="InterPro IPR011051; KEGG: rha:RHA1_ro03852 hypothetical protein; SPTR: A8RJL0 Putative uncharacterized protein; PFAM: Cupin domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827072.1" /db_xref="GI:302391252" /db_xref="GeneID:9512476" /translation="MGKQEIEITDPVCINEWRLVKGAEDQGIMEKILSYDSETGNYTR LLKFPPGTRTDEVLKHDFCEEIYVLEGYLTDVNKELTMKAGDYGCRPVGMPHGPYDIP NGCMTLEMRYQDPNKEIDEDCSLMKMDFER" misc_feature 504055..504300 /locus_tag="Acear_0461" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene 504450..505226 /locus_tag="Acear_0462" /db_xref="GeneID:9512477" CDS 504450..505226 /locus_tag="Acear_0462" /note="COGs: COG0388 amidohydrolase; InterPro IPR003010:IPR001110; KEGG: fra:Francci3_1242 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: A8RJL1 Putative uncharacterized protein; PFAM: carbon-nitrogen hydrolase" /codon_start=1 /transl_table=11 /product="Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase" /protein_id="YP_003827073.1" /db_xref="GI:302391253" /db_xref="GeneID:9512477" /translation="MKVASLQLNISDDMTKQDRIQYTLNQMEQASDADLILLPEVWNI GYFSFNQYGEQSETLNGPSISAVAEKADELNSYVFAGSIVERLEGELYNTSVMLDNDG EILDTYRKIHLFGYGSAETEILTPGEEIVVIETEIGNLGFSTCYDLRFPELFRKMMKK GAEIFLVTSGWPFPRLTNWTALNQARAAENICYLVSCNCAGENQGTQFLGHSMIVDPW GTPIASSDHQERIVRAEIDVSKVKEIRQEFPPLKDRVLEV" misc_feature 504450..505214 /locus_tag="Acear_0462" /note="Predicted amidohydrolase [General function prediction only]; Region: COG0388" /db_xref="CDD:30737" misc_feature 504453..505211 /locus_tag="Acear_0462" /note="Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases); Region: nitrilase_5; cd07583" /db_xref="CDD:143607" misc_feature order(504567..504569,504777..504779,504789..504791, 504807..504809,504882..504887,504891..504896, 504957..504959) /locus_tag="Acear_0462" /note="putative active site [active]" /db_xref="CDD:143607" misc_feature order(504567..504569,504777..504779,504882..504884) /locus_tag="Acear_0462" /note="catalytic triad [active]" /db_xref="CDD:143607" misc_feature order(504780..504791,504804..504806,504825..504833, 504885..504887,504891..504905,504912..504917, 504990..504995,504999..505007,505011..505016, 505077..505082,505203..505211) /locus_tag="Acear_0462" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:143607" gene 505251..505958 /locus_tag="Acear_0463" /db_xref="GeneID:9512478" CDS 505251..505958 /locus_tag="Acear_0463" /note="KEGG: rme:Rmet_1928 hypothetical protein; SPTR: A8RJK9 Putative uncharacterized protein; PFAM: protein of unknown function (DUF2848)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827074.1" /db_xref="GI:302391254" /db_xref="GeneID:9512478" /translation="MAYLEFRINGNPNEILQFEVEKMINAGYTGRNQEEVQKHVEELK AKGIPAPEEVPTYFPVFNDGIVQDEVLDALDETDHSGEAEYVLLCTADEIYVAAGSDH TDRKLEEESIPKAKQIYPNTISRDVWKLSEVEDHWDEIMMRSWVEDDGEKILFQEAPL SALLPPNELLERIKEIIEVESMEGVVIYSGTVGAEVDVDYSPIFEMELEDPKKDRKLE SKYRMKPMADWYKKEIK" misc_feature 505326..505913 /locus_tag="Acear_0463" /note="Protein of unknown function (DUF2848); Region: DUF2848; pfam11010" /db_xref="CDD:192696" gene 506121..507380 /locus_tag="Acear_0464" /db_xref="GeneID:9512479" CDS 506121..507380 /locus_tag="Acear_0464" /note="COGs: COG3135 Uncharacterized protein involved in benzoate metabolism; InterPro IPR004711; KEGG: mta:Moth_1772 benzoate transporter; PFAM: benzoate membrane transport protein; SPTR: Q2RHL6 benzoate transporter; PFAM: benzoate membrane transport protein; TIGRFAM: benzoate transporter" /codon_start=1 /transl_table=11 /product="benzoate membrane transport protein" /protein_id="YP_003827075.1" /db_xref="GI:302391255" /db_xref="GeneID:9512479" /translation="MFFESGFDLKKGINEFGEKANLTNISTGLIGGSTLALVAIPLVL KAGEAANLSQEIVMSWLFSIYFFGSIVGLILALGYQQPIAGAWSIPGIFAVTQVMHNF SINEAVGAFLVSGAIVLFLGVTGLIKKAVNYIPDSIMMAMVAGVLFSWALGIVDAFKS APWICLVGAIGFWVSKKVLSRIPPVLGTFVFGIVMAGILGQLNYSEINIGVANPIFFK PTFTMQAIMSISIPLAMLVIGAENMQAYGVLKAEEYDAPINAMTIASGIGGLIAPWMG GHNANIAGPMTGICADKVAGDKDGRYVAGVANGASFALFGLFAPLSLSMIDLLPGALV SLLVGLVLMGIINSALQTAFGDDKFLIGSFTALVIAISGVSMLKIGAAFWALVIGTLV SFMFEREDFNAMRLESEDGEEKAAESV" misc_feature 506244..507305 /locus_tag="Acear_0464" /note="Sulfate transporter family; Region: Sulfate_transp; cl00967" /db_xref="CDD:193990" gene 507720..508376 /locus_tag="Acear_0465" /db_xref="GeneID:9512480" CDS 507720..508376 /locus_tag="Acear_0465" /note="COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR017871:IPR003439:IPR003593; KEGG: dsy:DSY3396 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q24S07 Putative uncharacterized protein; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003827076.1" /db_xref="GI:302391256" /db_xref="GeneID:9512480" /translation="MFLEVNLEKEMKDFNISQKFTVNNEILILFGPSGAGKTTILDCV AGLQTPDKGAIKLNGEYLFSTKKKINLPPFKREIGYIFQEHALFPHLNVKENIKYSLD GCKSGKGYRFSVKEVLDMCRITHLQKRLPSQLSGGEKQRVALARALMREPSLLLLDEP LSALDYELRKHLQSEIKNLHKKWQIPFIYVTHNRDEAEFLGDRILQINHGSLRKIRAV " misc_feature 507726..508364 /locus_tag="Acear_0465" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 507732..508340 /locus_tag="Acear_0465" /note="putative bacteriocin export ABC transporter, lactococcin 972 group; Region: L_ocin_972_ABC; TIGR03608" /db_xref="CDD:188353" misc_feature 507810..507833 /locus_tag="Acear_0465" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(507819..507824,507828..507836,507966..507968, 508191..508196,508293..508295) /locus_tag="Acear_0465" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 507957..507968 /locus_tag="Acear_0465" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 508119..508148 /locus_tag="Acear_0465" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 508179..508196 /locus_tag="Acear_0465" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 508203..508214 /locus_tag="Acear_0465" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 508281..508301 /locus_tag="Acear_0465" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene 508456..509481 /locus_tag="Acear_0466" /db_xref="GeneID:9512481" CDS 508456..509481 /locus_tag="Acear_0466" /note="COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR001453; KEGG: chy:CHY_0621 molybdopterin-binding domain-containing protein; PFAM: molybdopterin binding domain; SPTR: Q3AEF7 Molybdopterin-binding domain protein; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain" /codon_start=1 /transl_table=11 /product="molybdopterin binding domain protein" /protein_id="YP_003827077.1" /db_xref="GI:302391257" /db_xref="GeneID:9512481" /translation="MEIKEIPVEEAVGRVVAHDMTQIIPQEFKGARFQKGDVIDSKDI STLKDMGKEHIYVLSLDEGTIHEDDAACQIAKKVVGKNIVLSEANEGKINLKAEQKGI LKVDKDLLLDVNSIDEILITSSHDNIFLQAGDSLAGVRINPLTIEERKLKQFEAILGD QNLFGIEPFVDKKVGVVVTGNEVYSGRIEDEFVPTLQRKFKRWGGELLDSIIVPDEVD EITEALSNLKESGAEVLITGGGMSVDPDDLTPKGIRNTGAEIVKYGVPVLPGNKLMLA YWDGIPVLGLPACVIFEEITVFDLIYPRLLTGEEFTRNDLIELSYGGYCYHCDVCQFP QCSFGKI" misc_feature 508492..509427 /locus_tag="Acear_0466" /note="MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is...; Region: MoeA_like; cd03522" /db_xref="CDD:58169" misc_feature order(509173..509181,509314..509319,509329..509331, 509338..509340) /locus_tag="Acear_0466" /note="putative MPT binding site; other site" /db_xref="CDD:58169" gene 509590..510360 /locus_tag="Acear_0467" /db_xref="GeneID:9512482" CDS 509590..510360 /locus_tag="Acear_0467" /note="COGs: COG1975 xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; KEGG: mta:Moth_2006 sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis; SPTR: Q2RGY7 Predicted sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis" /codon_start=1 /transl_table=11 /product="sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis" /protein_id="YP_003827078.1" /db_xref="GI:302391258" /db_xref="GeneID:9512482" /translation="MEQIEFYRKIATAYKQKEQAMIGTITAVKENNNFEFDPVGSKIL LRQEDRLAYPANSLELWQIILDNIDAADQLIDLKQPALNKVEIDSGSEMEVYFEPVIE EPRLLIFGAGHVAQSLAQVSKMADFKVTVMDDREDMVNRQRYPQADKLVCAEFDEYLE NVQIKENDYLVIVTRGHQHDYDVLREVIDSKARYIGMIGSSRKVKILFKNLQEKEGIS QELIDKVYAPIGVDIASETPAEIAISIIAEIISIRRGK" misc_feature 509602..510285 /locus_tag="Acear_0467" /note="Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones]; Region: XdhC; COG1975" /db_xref="CDD:32158" gene 510360..510683 /locus_tag="Acear_0468" /db_xref="GeneID:9512483" CDS 510360..510683 /locus_tag="Acear_0468" /note="COGs: COG1975 xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR003777; KEGG: nth:Nther_2211 protein of unknown function DUF182; PFAM: protein of unknown function DUF182; SPTR: C4CGJ9 Predicted sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis; PFAM: XdhC and CoxI family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827079.1" /db_xref="GI:302391259" /db_xref="GeneID:9512483" /translation="MDREIVNKIKSYEGEGDYIALATVISAAGSSPRNIGAQMLVYPN GAISGTVGGGISEAETIEKAQELIKTGKNKKYFFDMSNQEVAKSGGVCGGQVAIFIET IKINN" misc_feature 510417..510599 /locus_tag="Acear_0468" /note="XdhC and CoxI family; Region: XdhC_CoxI; pfam02625" /db_xref="CDD:190370" gene 510736..511485 /locus_tag="Acear_0469" /db_xref="GeneID:9512484" CDS 510736..511485 /locus_tag="Acear_0469" /note="COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR005950:IPR006059; KEGG: dae:Dtox_3447 molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C5U4T1 Molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein" /codon_start=1 /transl_table=11 /product="molybdenum ABC transporter, periplasmic molybdate-binding protein" /protein_id="YP_003827080.1" /db_xref="GI:302391260" /db_xref="GeneID:9512484" /translation="MKKIIWGLVLVLVLLVSITVQAQESLFVYCGAGFKKPMQEIGQL FERKYGIQVNYQFNGSGTLFNQIKTVKSGDLYIPGDIWYINKLKNGDQGNYIYTQAPV GYHTPVVITSNSNSSKIKEFNDLNQAKVQAVLGNKSAAIGRVTNKILAKADLTLNTVA KMGTVNQIAMAIAMGQGNVGVVWRANYKEFEDQLQMIKIPEEVNIVKDLAIGVLEFSD HKKKAVKFMNFVSSKKGQKIFNKYGYKTTKN" misc_feature 510796..511473 /locus_tag="Acear_0469" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene 511516..512307 /locus_tag="Acear_0470" /db_xref="GeneID:9512485" CDS 511516..512307 /locus_tag="Acear_0470" /note="COGs: COG0555 ABC-type sulfate transport system permease component; InterPro IPR000515:IPR006469:IPR011867; KEGG: dae:Dtox_3448 NifC-like ABC-type porter; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1T8I6 NifC-like ABC-type porter; TIGRFAM: NifC-like ABC-type porter; molybdate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; NifC-like ABC-type porter" /codon_start=1 /transl_table=11 /product="NifC-like ABC-type porter" /protein_id="YP_003827081.1" /db_xref="GI:302391261" /db_xref="GeneID:9512485" /translation="MKFNYFKVIMFIVFIVFIVFLTTVLFTPLIYIKGATLLSVLVNN QEVYYALSLSLLTSLISILLATIISLPVGYVLARYDFRGKKVFDILLDLPIILPPLVM GLSLLILLGPVLGDQLAKLGIKFVFTPLGVVMAQFIVATPFTIRSFKTAFIEIDPNLE KAAMTLGDSYFQVFRRITLPLAKNGIVSGITLAWARAMGEFGATVMLAGATRLKTETL PIAIFLNISTGDMDVAISISLIMIIFSIIVLGVLKTFDKGVDERF" misc_feature <511864..512217 /locus_tag="Acear_0470" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(511909..511911,512128..512130,512164..512166, 512173..512175,512203..512205) /locus_tag="Acear_0470" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(511987..512025,512041..512046,512056..512058) /locus_tag="Acear_0470" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 512440..512733 /locus_tag="Acear_0471" /db_xref="GeneID:9512486" CDS 512440..512733 /locus_tag="Acear_0471" /note="InterPro IPR008995; KEGG: mma:MM_1563 tungsten transporter, ATP binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827082.1" /db_xref="GI:302391262" /db_xref="GeneID:9512486" /translation="MTSQVVPSEENWIEKIAILPEDIYISDTKPPGPNINRIKGKLTR VEEDSAYVNCIVKTDREIKIKVLPEVFNSMNLSINDQVWLVFNLRKIKVLNGS" gene 512785..513534 /locus_tag="Acear_0472" /db_xref="GeneID:9512487" CDS 512785..513534 /locus_tag="Acear_0472" /note="KEGG: nth:Nther_2096 hypothetical protein; SPTR: B2A7F4 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF364)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827083.1" /db_xref="GI:302391263" /db_xref="GeneID:9512487" /translation="MKVLEKIKEEFSDLVIENGFSKYEIKIQARGLSSEEAIGNPKRD DFPLIIGDEVMIQAQFKDSLGQAFTDHPGNFQGSLSKILDLSFDSNYHRALFIASVNA VLRSLSAADKTVHCKDEEPHKCAKEMAEWISNNTDAVQIGIVGYQPAIVEECSHIFGS DNIMVTDLNPTVIGEIKAGVEIWDGSRDTESLIKNSDVVLATGSSIINNTIDQIIRLV KKYEKEYYFFGNTIAGPAALLDLPRLCFYGH" misc_feature 512971..513444 /locus_tag="Acear_0472" /note="Domain of unknown function (DUF364); Region: DUF364; cl00885" /db_xref="CDD:193966" gene 513562..514380 /locus_tag="Acear_0473" /db_xref="GeneID:9512488" CDS 513562..514380 /locus_tag="Acear_0473" /note="InterPro IPR017695; KEGG: nth:Nther_2210 biotin/lipoyl attachment; SPTR: B2A804 Biotin/lipoyl attachment; TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family; TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family" /codon_start=1 /transl_table=11 /product="selenium-dependent molybdenum hydroxylase system protein, YqeB family" /protein_id="YP_003827084.1" /db_xref="GI:302391264" /db_xref="GeneID:9512488" /translation="MIKEISNISDIKVLIKGGGDLATGIAYRLFQSGFTVACSELDEP SMVRRTVSFGEAVYQGEWEVEGIKARLINNKREFEQTVNDRNIPVFIADKMSLFKEVL SPQVIVDARMLKRVNDTVINEAPIVIGCGPGFSANSDVDAVVETNRGHYLGRVIYSGS AQDNTGVPGEIMGYARERVLFAPGSGVFTSSKKIGDEIKAGEEFGKVNDKVVSAAISG VIRGQIYPGIKVKEGMKIGDIDPRNKNDHCYTISDKALAIGGGVLEAILNLLNR" misc_feature 513598..514368 /locus_tag="Acear_0473" /note="selenium-dependent molybdenum hydroxylase system protein, YqeB family; Region: matur_yqeB; TIGR03309" /db_xref="CDD:132352" gene 514463..515224 /locus_tag="Acear_0474" /db_xref="GeneID:9512489" CDS 514463..515224 /locus_tag="Acear_0474" /note="InterPro IPR017587; KEGG: dsy:DSY0867 hypothetical protein; SPTR: Q24Z86 Putative uncharacterized protein; TIGRFAM: probable selenium-dependent hydroxylase accessory protein YqeC" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827085.1" /db_xref="GI:302391265" /db_xref="GeneID:9512489" /translation="MLAEVLGIRFGAAISLIGGGGKTTTMFRLAEELSLENRVITTTT TKIFKPPTNKIDDLIICKDFDLLLERLELSQAQLLTVAKKITVKDKLIGIDSCWVDKL KGAGLSYAPIIIVEADGAACKDFKIPNQTEPVVPVSTNLLLPVVGSRLVGQQLNSHNL HRASLINTINSQFDIGQLITPELVVEILLGKAGYDLLTKQQNYEVIPLINQVDTDPRY NFALEIAHKLVAAGIKKVLLTAVKRKEPVVGVVKR" misc_feature 514502..515137 /locus_tag="Acear_0474" /note="probable selenium-dependent hydroxylase accessory protein YqeC; Region: TIGR03172" /db_xref="CDD:188292" gene 515221..515808 /locus_tag="Acear_0475" /db_xref="GeneID:9512490" CDS 515221..515808 /locus_tag="Acear_0475" /note="COGs: COG2068 Uncharacterized MobA-related protein; InterPro IPR001228; KEGG: geo:Geob_0102 molybdenum hydroxylase accessory protein, YgfJ family; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: B9M8E1 Molybdenum hydroxylase accessory protein, YgfJ family; PFAM: Uncharacterized protein family UPF0007" /codon_start=1 /transl_table=11 /product="4-diphosphocytidyl-2C-methyl-D-erythritolsynthas e" /protein_id="YP_003827086.1" /db_xref="GI:302391266" /db_xref="GeneID:9512490" /translation="MISAIVLAAGMSTRLGKTKQLLSIGEQTIIERVIDNLLAVDLDE VVVVVGHEAPKVKKVLNNRDIKISYNPDYRSGQSTSLIRGLQSINNKCSGILCALGDQ PLVKAKTLNRLIVEFKRGQDLIVVPEYKEQRGNPVIFDSQLKPEMLKLEGDQGARTLI KKYHVQSKRVRVSDRGVVFDIDTKVDYHQLLKQLD" misc_feature 515221..515802 /locus_tag="Acear_0475" /note="molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed; Region: mobA; PRK00317" /db_xref="CDD:178976" misc_feature 515224..515781 /locus_tag="Acear_0475" /note="GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function; Region: GT_2_like_f; cd04182" /db_xref="CDD:133025" misc_feature order(515239..515241,515245..515247,515521..515523) /locus_tag="Acear_0475" /note="Ligand binding site [chemical binding]; other site" /db_xref="CDD:133025" misc_feature order(515521..515523,515758..515760,515764..515766) /locus_tag="Acear_0475" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:133025" gene 515883..516218 /locus_tag="Acear_0476" /db_xref="GeneID:9512491" CDS 515883..516218 /locus_tag="Acear_0476" /note="COGs: COG2005 N-terminal domain of molybdenum-binding protein; InterPro IPR011991:IPR000847; KEGG: nth:Nther_2202 transcriptional regulator, ModE family; PFAM: regulatory protein LysR; SPTR: B2A7Z6 Putative transcriptional regulator, ModE family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain" /codon_start=1 /transl_table=11 /product="ModE family transcriptional regulator" /protein_id="YP_003827087.1" /db_xref="GI:302391267" /db_xref="GeneID:9512491" /translation="MEIKWKIWLEEDDGKVFGDGPRELLSKVKELGSLRQAAKAMDMS YSKAWSIISMIEKNLDVELLQRQIGGSNGGGSELTEEGKEILIKYHKMEQEVDHTLQK IFQNFFNCC" misc_feature 515883..>516188 /locus_tag="Acear_0476" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene 516812..517228 /locus_tag="Acear_0477" /db_xref="GeneID:9512492" CDS 516812..517228 /locus_tag="Acear_0477" /EC_number="5.4.99.1" /note="COGs: COG2185 methylmalonyl-CoA mutase C-terminal domain/subunit (cobalamin-binding); InterPro IPR006158:IPR006394; KEGG: hor:Hore_15460 glutamate mutase subunit S; PFAM: cobalamin B12-binding domain protein; PRIAM: methylaspartate mutase; SPTR: B8CYC6 glutamate mutase subunit S; TIGRFAM: methylaspartate mutase, S subunit; PFAM: B12 binding domain; TIGRFAM: methylaspartate mutase, S subunit; methylmalonyl-CoA mutase C-terminal domain" /codon_start=1 /transl_table=11 /product="glutamate mutase subunit S" /protein_id="YP_003827088.1" /db_xref="GI:302391268" /db_xref="GeneID:9512492" /translation="MEDKTIVMGVIGSDVHAVGNRILQEAFEKAGFEVINIGVLAPQE DFINAAVETDADAILVSSLYGHGEMDCKGFKEKCVEAGLEDIVLYVGGNLVVGKQDWE PVKEKFLDMGFDRVYPPGTLPEEPIADLKEDLGIEE" misc_feature 516824..517204 /locus_tag="Acear_0477" /note="B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-...; Region: Glm_B12_BD; cd02072" /db_xref="CDD:30210" misc_feature order(516848..516868,516875..516877,516986..516994, 516998..517006,517088..517090,517160..517162, 517169..517171,517187..517189) /locus_tag="Acear_0477" /note="B12 binding site [chemical binding]; other site" /db_xref="CDD:30210" misc_feature order(516848..516850,516854..516856,516860..516865, 516872..516877,516884..516886,516920..516931, 517001..517003,517007..517009,517013..517021, 517088..517090,517097..517105,517130..517132, 517166..517168) /locus_tag="Acear_0477" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:30210" misc_feature 516857..516859 /locus_tag="Acear_0477" /note="cobalt ligand [ion binding]; other site" /db_xref="CDD:30210" gene 517256..518674 /locus_tag="Acear_0478" /db_xref="GeneID:9512493" CDS 517256..518674 /locus_tag="Acear_0478" /note="InterPro IPR006230; KEGG: hor:Hore_15450 conserved hypothetical protein TIGR01319; SPTR: B8CYC5 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827089.1" /db_xref="GI:302391269" /db_xref="GeneID:9512493" /translation="MELALLLDIGSTYTKATVVDVENIELKAKAKASTTVWNDVNVGI ENALNKIEEQGIDLDKIEHRLACSSAAGGLKLVAIGLVPDLTAEAAKRAALGAGAKVA NVYSYEITDTELEEIIDQESDVILLAGGTDGGNQEIILKNARTLADSKLAAPVIVAGN KVATNEVTEVLEEGGKEVYVTENVMPKLEELNIEPARKTIRQVFLDKIIYAKGLSQAK EHIDRLIMPTPSAVMTAAELIAEGTHDEGGLGELIIVDIGGATTDIHSVAAGNPTKGG VNVKGLEEPYVKRTVEGDLGMRYSAPSLLKAVGERELLTYLSDDIDKEQVIDYVSKVR EDVEYVPSNKEEKDLDSGLAKVATKLAIQRHVGRIETVYSPFGETQVQYGKDLTDLDL IIGTGGVLVHNDKPAKVLQAGLFDEAEPTILAPMEPGFLLDQDYLLASIGLLSEISAT KALKLAKKHFKQIGGEINGIKE" misc_feature 517274..518635 /locus_tag="Acear_0478" /note="conserved hypothetical protein; Region: glmL_fam; TIGR01319" /db_xref="CDD:130386" gene 518658..520106 /locus_tag="Acear_0479" /db_xref="GeneID:9512494" CDS 518658..520106 /locus_tag="Acear_0479" /EC_number="5.4.99.1" /note="COGs: COG4865 glutamate mutase epsilon subunit; InterPro IPR014348:IPR014714:IPR016176:IPR006396; KEGG: drm:Dred_2690 methylaspartate mutase, E subunit; PFAM: methylaspartate mutase E subunit; PRIAM: methylaspartate mutase; SPTR: A1HQG4 methylaspartate mutase, E subunit; TIGRFAM: methylaspartate mutase, E subunit; PFAM: methylaspartate mutase E chain (MutE); TIGRFAM: methylaspartate mutase, E subunit" /codon_start=1 /transl_table=11 /product="glutamate mutase subunit E" /protein_id="YP_003827090.1" /db_xref="GI:302391270" /db_xref="GeneID:9512494" /translation="MELKNEKWSLDKFKEIREEVLQQWPTGKDVDFEEAIEYHNNLPE EQIMAEKLAEAKEEDVTLIQPRAGVALIDEHIELLKFLREEGQADLLPSTIDSYTRQN NYEEAEAGIEESREEGRSMLNGFPAVNHGVKACREVVEALDAPLQVRHGTPDARLLAE ITLAGGFTDYEGGGLSYNIPYAKNVSIEQTLLDWQYVDRLIGYYEENGIKINREPFGP LTGTLVPPSVSHSVAIIEGLLAAEQGVKNITLGYGQCGNLVQDVAALQSLEELAEEYL ADYEDVMLTTVFHQWMGGFPQDEAQAFGVISWGAATAALGKATKVITKTPHEAMGVPT KEANAEGLRSTKQVINMLRDQSLLSNDKLEEEKEMIKQETKQILDRVFELGNGDVAQG TVRAFEAGVLDVPFAPSKYNAGNLLPARDDDGAVRFLNHGNLPFSDEVVEFHQEKLEA RGKSEGREPNFQMVIDDIYAIGKGRLVGRPRS" misc_feature 518796..520070 /locus_tag="Acear_0479" /note="Coenzyme B12-dependent glutamate mutase epsilon subunit-like family; contains proteins similar to Clostridium cochlearium glutamate mutase (Glm) and Streptomyces tendae Tu901 NikV. Glm catalyzes a carbon-skeleton rearrangement of L-glutamate to L-threo-; Region: Glm_e; cd00245" /db_xref="CDD:58272" misc_feature order(518853..518855,518937..518939,518955..518957, 519102..519107,519168..519170,519186..519188, 519198..519200,519303..519305) /locus_tag="Acear_0479" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:58272" misc_feature order(518937..518939,519195..519197,519315..519317, 519531..519542,519636..519641,519648..519653, 520062..520064) /locus_tag="Acear_0479" /note="B12 cofactor binding site [chemical binding]; other site" /db_xref="CDD:58272" misc_feature order(518946..518951,518958..518960,519021..519026, 519195..519200,519204..519206,519642..519647, 520050..520052) /locus_tag="Acear_0479" /note="heterodimer (sigma-epsilon) interface [polypeptide binding]; other site" /db_xref="CDD:58272" misc_feature order(519423..519425,519429..519431,519549..519551, 519555..519560,519576..519581,519588..519590, 519675..519677,519684..519689,519696..519698, 519705..519707,519924..519926,520068..520070) /locus_tag="Acear_0479" /note="homodimer (epsilon-epsilon) interface [polypeptide binding]; other site" /db_xref="CDD:58272" gene 520154..521395 /locus_tag="Acear_0480" /db_xref="GeneID:9512495" CDS 520154..521395 /locus_tag="Acear_0480" /EC_number="4.3.1.2" /note="COGs: COG3799 methylaspartate ammonia-lyase; InterPro IPR006395; KEGG: hor:Hore_15430 methylaspartate ammonia-lyase; PFAM: methylaspartate ammonia-lyase; PRIAM: methylaspartate ammonia-lyase; SPTR: B8CYC3 methylaspartate ammonia-lyase; TIGRFAM: methylaspartate ammonia-lyase; PFAM: methylaspartate ammonia-lyase C-terminus; methylaspartate ammonia-lyase N-terminus; TIGRFAM: methylaspartate ammonia-lyase" /codon_start=1 /transl_table=11 /product="methylaspartate ammonia-lyase" /protein_id="YP_003827091.1" /db_xref="GI:302391271" /db_xref="GeneID:9512495" /translation="MKIEKIVTSPGLTGFYFDDQRAIKEDAEHDGLAYLGDPVTEGFS SIRQAGESISVMIILEDGQVAYGDCAAVQYSGAGGRDPLFLAEEFIPIIEEDIAPKLV GREMDSFKELAEEFDNLKVDGERLHTAIRYGITQALLDAVAKSKNKTMTEVVAEEYGL DLVSKPVPIFAQTGDDRYLNADKMIIKHADVIPHALINNVKDKLGEDGDKLLDYVEWL KNRVSQLRTEEDYEPIFHIDVYGTIGLAFDNDPEAMADYLEKLAAMAKPHTLRIEGPM DSGSRADQVADMKALRDEVKERGIDVELVADEWCNTFADIKKFVDEEAADVVQIKTPD LGGINNTIEAVLYCKENGVGAYQGGTCNETDRSAQVCVNLALATRPDQMLAKPGMGVD EGLMIVNNEMNRVLSLIEACN" misc_feature 520157..521386 /locus_tag="Acear_0480" /note="methylaspartate ammonia-lyase; Region: B_methylAsp_ase; TIGR01502" /db_xref="CDD:130566" misc_feature 520301..521377 /locus_tag="Acear_0480" /note="Methylaspartate ammonia lyase (3-methylaspartase, MAL) is a homodimeric enzyme, catalyzing the magnesium-dependent reversible alpha,beta-elimination of ammonia from L-threo-(2S,3S)-3-methylaspartic acid to mesaconic acid. This reaction is part of the...; Region: MAL; cd03314" /db_xref="CDD:73344" misc_feature order(520313..520315,520334..520336,520349..520351, 520688..520690,520697..520702,520709..520714, 520814..520816,521315..521323,521327..521332, 521339..521341,521351..521353,521360..521365, 521372..521374) /locus_tag="Acear_0480" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73344" misc_feature order(520667..520669,520733..520735,520865..520867, 520970..520972,521072..521074,521138..521140, 521231..521236) /locus_tag="Acear_0480" /note="active site" /db_xref="CDD:73344" gene 521413..522771 /locus_tag="Acear_0481" /db_xref="GeneID:9512496" CDS 521413..522771 /locus_tag="Acear_0481" /note="KEGG: hor:Hore_15420 hypothetical protein; SPTR: B8CYC2 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1446)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827092.1" /db_xref="GI:302391272" /db_xref="GeneID:9512496" /translation="MEELRILSPTAILGYGFPRESFERGLEKEPDLIAVDAGSTDPGP YYLGAGISFTDKTAVKRDLKLMIKAGQERDIPVILGSAGGAGGAPHLEWCTEIVKEIA EEEDLNFKLATIQSEQDPDYILDKFEAGGVSALPPAEETTRAELEASTRIVGQMGVEP IIKALEKDAEVIVAGRAYDPTVFAGYCIKEGFPAGLALHMGKIMECASIAANPGSGSD SMFGILRDDHFVLEPLNKDRRCTTTSVAAHTLYEKANPLELHGPGGVIDLSEADFEQL DDRRVKVTGSKFIEDEEYTVKLEGAKKVGYRTLSIAGTRDPIMINELDHIKEVVRETV RDNFDDLSEDDYQLLFRIYGEDAVMGDLEPNEEITSHEVGIVIEVVAKTQELANTICS FARSTMLHYGYPGRVATAGNLAFPYSPSDLKAGEVYEFNLHHLITVDDPCEPFPMEIE EL" misc_feature 521506..522351 /locus_tag="Acear_0481" /note="Protein of unknown function (DUF1446); Region: DUF1446; pfam07287" /db_xref="CDD:191720" gene 522794..523117 /locus_tag="Acear_0482" /db_xref="GeneID:9512497" CDS 522794..523117 /locus_tag="Acear_0482" /note="KEGG: hor:Hore_15410 hypothetical protein; SPTR: B8CYC1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827093.1" /db_xref="GI:302391273" /db_xref="GeneID:9512497" /translation="MSETKNIRELIDVIRSKNAGPYELTFDFIFKSFEIYDKVKESGV VNKELIADLYDIPVDDVISVINYDPAKAIKATIVRPCSSGAVGETDVYGAQQHAPLLS IEIPM" gene 523203..525389 /locus_tag="Acear_0483" /db_xref="GeneID:9512498" CDS 523203..525389 /locus_tag="Acear_0483" /note="COGs: COG3829 transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR000014:IPR003593:IPR013767; KEGG: nth:Nther_0777 sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; SMART: AAA ATPase; PAS domain containing protein; SPTR: B5UK27 Sigma-54 dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: Ribonuclease R winged-helix domain; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box" /codon_start=1 /transl_table=11 /product="sigma54 specific transcriptional regulator" /protein_id="YP_003827094.1" /db_xref="GI:302391274" /db_xref="GeneID:9512498" /translation="MGYEVGFSLYNPFGYLWELFSLKGKLDFMSKNIVGDYNFLSGGT LVGITKKELVIITISKETNELFKQQLEKVLKNKVNIKSYIIEEIDDQFVEADLILSTK SLMGEIDNYVADPSKIIFARRSLDISFLEQLIKLPANKKALLINNTQLAAFEAKDLLT EVGIDHIDLIPFYPGKGTVDKVDLAINLGEDKYVPDNIDQVINIGSRVLDLTTIIEIL IELNLLDDKSNLLSSRYIRELVELSRRLEINMKNKARINKKLDAIINHVHDGIIYINQ QEEIKVFNEMAEEIFEMDAEDVIGNKVNETIPNTKLDEVLKEDIKHINAVQNIGSKKI VSTRVPVKEEGETVGALATFKDVTDVKELEEDLRRKLKKKGHIAKYNFSDIVGKSQEL KKGIKKAKKLSKSESTVLIQGESGTGKELFAHSIHNYSERNKAPFVVINCAALPDNLL ESELFGYEEGAFTGAKKGGKPGVFEQAHTGTIFLDEIGDISPSIQSRLLRVLQEKEVM RVGGTKVIPIDIRVITATNKNIQQLVSEGKFREDLYYRLNVLSLQLPPLRRRREDIPL LIDYFLEKFDREDLSLSKEVISRLYNYNWKGNIRELENCIEYIVQICEDEVEIDNLPS HFNPKQNNQKQEQVNMDFELDELGDIEEYIFILNELYLAKQLDENIGRREIAKNAEIN NLYLSPQMVRSRLNKLEEHGLVDIGKGRQGTTITNKGIKVLKELGN" misc_feature 523905..525161 /locus_tag="Acear_0483" /note="Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:33622" misc_feature 523977..524174 /locus_tag="Acear_0483" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature 524427..524846 /locus_tag="Acear_0483" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 524439..524462 /locus_tag="Acear_0483" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(524442..524465,524655..524657,524781..524783) /locus_tag="Acear_0483" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 524643..524660 /locus_tag="Acear_0483" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 524838..524840 /locus_tag="Acear_0483" /note="arginine finger; other site" /db_xref="CDD:99707" gene 525717..526559 /locus_tag="Acear_0484" /db_xref="GeneID:9512499" CDS 525717..526559 /locus_tag="Acear_0484" /EC_number="4.2.1.2" /note="COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646; KEGG: amt:Amet_3413 fumarate hydratase; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; SPTR: C6PXL2 Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region" /codon_start=1 /transl_table=11 /product="fumarase alpha subunit" /protein_id="YP_003827095.1" /db_xref="GI:302391275" /db_xref="GeneID:9512499" /translation="MSINVNEITDAVAEMCMEANFILGDDIIESYHQALEREDSPVAQ EILERLIENAEIAKEEKMPICQDTGMTVVFAELGQDAEIEGGDLTEAINKGVSKGYKE GYLRKSVVDGPLERENTGDNTPAVIHTEIVPGDKLKLTVAPKGFGSENMSQIKMLKPA DGVEGVKDFVVQAVKEAGPNPCPPVVVGVGIGGTFEKAAFLAKKSLLRPVGEASQEEN ISELEEELLEKVNELNIGPQGFGGKTTALAVNVETYPTHIAGLPVAVNINCHVTRHKE RTLG" misc_feature 525723..526553 /locus_tag="Acear_0484" /note="Fumarate hydratase (Fumerase); Region: Fumerase; cl00851" /db_xref="CDD:186222" gene 526575..527108 /locus_tag="Acear_0485" /db_xref="GeneID:9512500" CDS 526575..527108 /locus_tag="Acear_0485" /note="COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain; InterPro IPR004647; KEGG: hmo:HM1_0464 fumarate hydratase, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; SPTR: B0TFI2 Fumarate hydratase, beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region" /codon_start=1 /transl_table=11 /product="hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit" /protein_id="YP_003827096.1" /db_xref="GI:302391276" /db_xref="GeneID:9512500" /translation="MSEIRLETPLTEEKVRELEAGDTVLISGTVYTARDAAHARLIDA LDSEKDMPFEIDGQVIYYVGPAPAKPGKPIGSAGPTTSYRMDPFAPRLIKEGLRGMIG KGYRNNEVVEAMKEEGAVYFGAIGGAAALIAQRIKEAEVIAYDDLGTEAVRRLEVEDL PVLVVIDAEGNSLYETE" misc_feature 526581..527099 /locus_tag="Acear_0485" /note="Fumarase C-terminus; Region: Fumerase_C; cl00795" /db_xref="CDD:186192" gene 527590..529098 /locus_tag="Acear_0486" /db_xref="GeneID:9512501" CDS 527590..529098 /locus_tag="Acear_0486" /note="COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: sru:SRU_1137 Na(+)/H(+) antiporter family protein; PFAM: Na+/H+ antiporter NhaC-like; SPTR: Q2S3G8 Na+/H+ antiporter family; PFAM: Na+/H+ antiporter family" /codon_start=1 /transl_table=11 /product="transporter, NhaC family (TC 2.A.35)" /protein_id="YP_003827097.1" /db_xref="GI:302391277" /db_xref="GeneID:9512501" /translation="MNKNMKKQMKKWLLLTVGVVAFTFMLSSVGFAGGESAENYGILS IVPPILALTLAFVTRQVVPALFLGVVAGGIITGNFDIVGEYLIPSLGSEGYAQILLVY LWCLGGLIGIWTKTGGAQKFAKWAGKKMVRGRRSAKFFAWIMGVVFHQGGTISTILAG STVRPICDEAGVSHEELSYIVDSTASPIATLIPFNAWPLYIAGLVAGTIPLIPDESAG LDLFFSAIPYNFYAWIAILFTFLLAMEKLPFIGSKMKKAIKRVKETGKLNRDGADPLA SEELTDLDVPEDYNTTLIDFIVPIGTLLGVGVIPKFIVGDMYIPQAFMLSVLSAMVLA LFKGMELDNVIDGFVDGAKGVTIGAIILGLAVTLGNVSDSLGTASYIVGATESIIIPV LLPAIYMVLCMFIAFSVGSSWGTYAVMFPIAMPLAYAVNPDPTFITLCFAAVTGGSIY GDQVSPISDTTIMSSLACGADLMDHVYSQIPQASVAAGISMVLYTILTAILC" misc_feature 527707..529071 /locus_tag="Acear_0486" /note="Na+/H+ antiporter [Energy production and conversion]; Region: NhaC; COG1757" /db_xref="CDD:31943" misc_feature 528151..529080 /locus_tag="Acear_0486" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene 529296..530066 /locus_tag="Acear_0487" /db_xref="GeneID:9512502" CDS 529296..530066 /locus_tag="Acear_0487" /note="COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: amt:Amet_2977 LamB/YcsF family protein; PFAM: LamB/YcsF family protein; SPTR: A6TSF8 UPF0271 protein Amet_2977; PFAM: LamB/YcsF family" /codon_start=1 /transl_table=11 /product="LamB/YcsF family protein" /protein_id="YP_003827098.1" /db_xref="GI:302391278" /db_xref="GeneID:9512502" /translation="MYKVDLNSDIGESFGNYKLGFDEEIVPHITSANIACGWHAGDPT VMAHTVDIAIQNNTAIGAHPGLPDLMGFGRRRMEVSPQEVKSYVKYQLGALTAFAEAK GNKIQHVKPHGGLYNMAAEDRDLARAIAKGIYEVDKDIILVGLANSELIHMGKEVGVR VANEVFADRAYNPDGTLVSRKREGAVIHDPDLAFSRIAKMVLDGKVEAINGEEIEITA DTICVHGDNPEAVEFVSKINTKLKAEGIEVAPISQIVA" misc_feature 529296..530033 /locus_tag="Acear_0487" /note="LamB/YcsF family; Region: LamB_YcsF; cl00664" /db_xref="CDD:186134" gene 530259..531524 /locus_tag="Acear_0488" /db_xref="GeneID:9512503" CDS 530259..531524 /locus_tag="Acear_0488" /note="COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; InterPro IPR001046; KEGG: nth:Nther_1144 natural resistance-associated macrophage protein; PFAM: natural resistance-associated macrophage protein; SPTR: B2A1I7 Natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters" /codon_start=1 /transl_table=11 /product="natural resistance-associated macrophage protein" /protein_id="YP_003827099.1" /db_xref="GI:302391279" /db_xref="GeneID:9512503" /translation="MKEKIKEETQHCQGKKGFLAKLKQIGPGALVAAAFIGPGTVTTA TICGASFGYTLLWAMLFSIIATMVLQEMSSRLGVVTRKGIGEALRNQFDSPTLKWMSI ILVISAIGIGCAAYETGNILGGALGLETITGISGNIWGPVMGIIAFLFLWTGSYNIIE KILVGLVGVMSVTFILTAIIIRPDIGAILKGFFAPTIPKGGLMLAVSLIGTTVVPYNL FLHASAVQERWNSAEELSKSRLDTLLSIGLGGAISSAIIITAAATFKDTGIVPNNAGE MAIQLEPLLGTWAKWFFGIGLFAAGFSSSVTSPLAAAYATVEALGWKNDFKSTKFKLI WGIVLIVGIIGSGLGKSPVTIILFAQAANGILLPIIALFLMILMNNEDRLGEYANSKF QNLLGWIVTAVAFGLGIKSLYSVLQKLIG" misc_feature 530379..531431 /locus_tag="Acear_0488" /note="Natural resistance-associated macrophage protein; Region: Nramp; cl00836" /db_xref="CDD:193950" gene 531837..533138 /locus_tag="Acear_0489" /db_xref="GeneID:9512504" CDS 531837..533138 /locus_tag="Acear_0489" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: tex:Teth514_2350 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003827100.1" /db_xref="GI:302391280" /db_xref="GeneID:9512504" /translation="MKLAKYFIHKPNQTQQVVLGCLAYASARLYNIGNYQRKNWSKDS DEDYPDWYKQKKQLKTNFWYKNLPSQTAQETLKILADNWDSFYQSMEDYQDNPDKYNG KPNSPNYKPKDSKFNFRYLNNGFKIIDGKLRLSIPKQLKEYLKKEYSITNKFLWIRVP NELLSSNRDILNSTTRIEFKPLSDDTYKVILTYKVDTPTIKEDNGNYLSIDLGINNLM TCYSNQNQESFIIDGGQYLAINRYFDKKIKHYQSILNDQGKKTSKRIQNLYKKRRKQL FHLIHSATKKVVNYCVENNISRVIVGDIKNIRDDADLGKQNNQKLHKLPFDIIYHQLE YKLNLQGITLIKKSEKYTSQCSPYSKKVTKKYANKSNRVKRGLYIDKDNNQAFNADSI GAFNILRKYLQQRRKGPDITLQVKGLSNPVKYNWNNHQFAA" misc_feature 531837..533042 /locus_tag="Acear_0489" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature 532023..532760 /locus_tag="Acear_0489" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature 532650..532895 /locus_tag="Acear_0489" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature 532812..533036 /locus_tag="Acear_0489" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 533249..533692 /locus_tag="Acear_0490" /db_xref="GeneID:9512505" CDS 533249..533692 /locus_tag="Acear_0490" /note="COGs: COG4336 conserved hypothetical protein; InterPro IPR009906; KEGG: tpd:Teth39_1160 hypothetical protein; PFAM: protein of unknown function DUF1445; SPTR: C7HK72 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1445)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827101.1" /db_xref="GI:302391281" /db_xref="GeneID:9512505" /translation="MKLGISMPSSSQENIPIRHIEAGKNVPMYITNKQCKTAGKFKGP MVVSMRPIPSDLITDTIQITAKYKTVHGTPVQVGSPEKLGIENINTPDFGDSVKIKAD EIPVFWACGVTPQAVAMKVKLSIMITHSPGHMFITDLENKELKNY" misc_feature <533282..533680 /locus_tag="Acear_0490" /note="Protein of unknown function (DUF1445); Region: DUF1445; cl01790" /db_xref="CDD:186475" gene 533770..534486 /locus_tag="Acear_0491" /db_xref="GeneID:9512506" CDS 533770..534486 /locus_tag="Acear_0491" /note="COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR003833:IPR010016; KEGG: amt:Amet_2974 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; SPTR: A6TSF5 Allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370" /codon_start=1 /transl_table=11 /product="Allophanate hydrolase subunit 1" /protein_id="YP_003827102.1" /db_xref="GI:302391282" /db_xref="GeneID:9512506" /translation="MCLQAKYKPAGDKAVVIELENVVSKEINQRIRALMIAIEEKEID GVLEVVPTYSSLMVHYEVQKISYDQLIKKLKVLEEQLEDLELSEPKTIKIPTVYGGEY GPDIEKVAEYNGLTVDEVVEIHTSKPYLIYMLGFVPGFPYLGGMDEQIATPRLENPRT KIPAGSVGIAGKQTGIYPIDTPGGWQLIGRTHIKLYEPYSDDPFLLKAGNYVKFVQIS EEEYKSKNKNVERGKQKWEK" misc_feature 533785..534387 /locus_tag="Acear_0491" /note="Allophanate hydrolase subunit 1; Region: AHS1; pfam02682" /db_xref="CDD:145701" misc_feature 533788..534435 /locus_tag="Acear_0491" /note="Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]; Region: DUR1; cl00896" /db_xref="CDD:176822" gene 534474..535661 /locus_tag="Acear_0492" /db_xref="GeneID:9512507" CDS 534474..535661 /locus_tag="Acear_0492" /EC_number="6.3.4.6" /note="COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR003778; KEGG: amt:Amet_2973 UreA amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; PRIAM: Urea carboxylase; SMART: Allophanate hydrolase subunit 2; SPTR: A6TSF4 Urea amidolyase related protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain" /codon_start=1 /transl_table=11 /product="urea amidolyase related protein" /protein_id="YP_003827103.1" /db_xref="GI:302391283" /db_xref="GeneID:9512507" /translation="MGEIKIIKSGMLTLIEDDGRYGYQQYGVPVSGTMDFFAHRLANI LVGNDELESVLETTIIGPEIEFHDDMVIAITGADSSPILNGKSIPLWQSIRVHRGDHL SFNGIKDGCRSYIAFSGGFDVPVVMDSKSTYIKAGIGGFKGRALNQGDVLRIGEPTEE ITELEGRKIPQEYINYHLQDNINIRVVLGPQKEYFTAKGIEAFLSNKYEITNESDRMG YRLNGEEIEHKKSADILSDGIAMGAVQVPSNGQPIIMMADRQVTGGYTKIANVITVDL PKIAQAKPGQEIEFEAITVQKAQKLLRSFENKINFIKRVFKLKLKNNKKLITYRLDEL SKLFLDNIKDEVKDCTDKREEINLSKIKELVKLLNETDVYEINFKKNDIKINIKKRSA RNF" misc_feature 534546..535394 /locus_tag="Acear_0492" /note="Allophanate hydrolase subunit 2; Region: AHS2; cl00865" /db_xref="CDD:176587" misc_feature 534546..535367 /locus_tag="Acear_0492" /note="Allophanate hydrolase subunit 2; Region: AHS2; pfam02626" /db_xref="CDD:145662" gene 535993..536892 /locus_tag="Acear_0493" /db_xref="GeneID:9512508" CDS 535993..536892 /locus_tag="Acear_0493" /note="InterPro IPR018163; KEGG: hor:Hore_15400 hypothetical protein; SPTR: B8CYC0 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827104.1" /db_xref="GI:302391284" /db_xref="GeneID:9512508" /translation="MFHSFAQSVYFAPRGKKRLMLLGDSLSQKYLSPTDKLIGLIGEG GSGKSLLIKGMFPGLNLTNDDNGVEVRPLPLWEGSEKNNFTNHTYHVDAKFETAFMQP WELGSAIQKAIDNERRVVIEHFELIAEYLRMDADLLVGIGEEVLITRPGVFGPQPEEI VEIVFKSIKHRRMAHTVEDLTSKVLEEELGVEKPTYHSDVKSGFVLQFDEKPEFDFEE LETRVKEIIDKNLPVSFHDESSINIGEDTYSCTGPRIHVNKTGDINYFRLIKELKYDA KIGRYLLAGFVGRERSQFELSHK" misc_feature 536590..>536802 /locus_tag="Acear_0493" /note="threonyl-tRNA synthetase; Reviewed; Region: thrS; PRK12305" /db_xref="CDD:183422" gene 536917..537816 /locus_tag="Acear_0494" /db_xref="GeneID:9512509" CDS 536917..537816 /locus_tag="Acear_0494" /note="InterPro IPR018163; KEGG: hor:Hore_15400 hypothetical protein; SPTR: B8CYC0 Putative uncharacterized protein; PFAM: Threonyl and Alanyl tRNA synthetase second additional domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827105.1" /db_xref="GI:302391285" /db_xref="GeneID:9512509" /translation="MFDCLAQSVYFAPRGRRRLMLLGKNLAQKYLTDDDKIIGLIGDE GSGKSLLIRGMFPGLNLVNDDKGINIKPSSIIQDARENNFNSHTYHVDVRFETAFVQP WQLGEVVQKAVDDGQRVVIEHFELLADHLELDADLLLGIGEEVLTMRPGVFSSHPEEI AEIVFDSIKYRRMAHTAEDLTSKVLEEELGVKKSTYHSDVKSGFVLQFEEKPEFDFDD LETKINEVIADNKLVKFHDREHIKIGDETYPCSGPRIHVKKTGDIKNFRLIKELKYDS KQERYLLTGLVGDEQSQFELSNK" misc_feature <537439..>537729 /locus_tag="Acear_0494" /note="Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: AlaS; COG0013" /db_xref="CDD:30363" misc_feature 537637..>537729 /locus_tag="Acear_0494" /note="Threonyl and Alanyl tRNA synthetase second additional domain; Region: tRNA_SAD; cl08469" /db_xref="CDD:158351" gene 537895..538650 /locus_tag="Acear_0495" /db_xref="GeneID:9512510" CDS 537895..538650 /locus_tag="Acear_0495" /EC_number="2.7.7.56" /note="COGs: COG0689 RNase PH; InterProIPR018336:IPR020568:IPR015847:IPR002381:IPR 001247; KEGG: hor:Hore_15390 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: B8CYB9 Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH" /codon_start=1 /transl_table=11 /product="RNAse PH" /protein_id="YP_003827106.1" /db_xref="GI:302391286" /db_xref="GeneID:9512510" /translation="MRVDGRDRDELREVTITRDFTKYAEGSILISTGDTKVICNASVE ESVPYFLRDQGQGWITGEYAMLPRATESRNIRAAAKGKISGRTKEIQRLIGRAMRSVI DLDKLGERTIWLDCDVIQADGGTRTASITGAFVALIDALDYLLEKDKIDEMPVKSFIA ATSVGIIDGAPALDLCYKEDSSAQVDLNLVMTEEGRIIEIQGTGEENPFTQQELDKLV ELGEKGIKELIRYQKEALGDKAELLNQKEDDNA" misc_feature 537895..538608 /locus_tag="Acear_0495" /note="ribonuclease PH; Reviewed; Region: rph; PRK00173" /db_xref="CDD:178914" misc_feature 537922..538314 /locus_tag="Acear_0495" /note="3' exoribonuclease family, domain 1; Region: RNase_PH; pfam01138" /db_xref="CDD:189854" misc_feature 538366..538566 /locus_tag="Acear_0495" /note="3' exoribonuclease family, domain 2; Region: RNase_PH_C; pfam03725" /db_xref="CDD:190728" gene 538643..539245 /locus_tag="Acear_0496" /db_xref="GeneID:9512511" CDS 538643..539245 /locus_tag="Acear_0496" /note="COGs: COG0127 Xanthosine triphosphate pyrophosphatase; InterPro IPR002637; KEGG: csc:Csac_0986 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; PFAM: Ham1 family protein; SPTR: A4XI65 Nucleoside-triphosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family" /codon_start=1 /transl_table=11 /product="non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family" /protein_id="YP_003827107.1" /db_xref="GI:302391287" /db_xref="GeneID:9512511" /translation="MRKIFLATGNEGKVKEMKDLLAELEVELVTTFDLSEVPEVVEDG STLEENAIKKAKELADYTGLLTIADDTGLLVDALAGRPGVYSARYAGEDATYDDNNRK LLSELDGISLEDRTARFKTVMALVKSEGEVKTVEGICKGKIGFKPEGNHGFGYDPLFI PQGYNVTFAEMKSEVKNKISHRAKALDKLKEILQSDWMDQ" misc_feature 538652..539215 /locus_tag="Acear_0496" /note="NTPase/HAM1. This family consists of the HAM1 protein and pyrophosphate-releasing xanthosine/ inosine triphosphatase. HAM1 protects the cell against mutagenesis by the base analog 6-N-hydroxylaminopurine (HAP) in E. Coli and S. cerevisiae. A Ham1-...; Region: HAM1; cd00515" /db_xref="CDD:29953" misc_feature order(538670..538672,538676..538681,538688..538690, 538853..538861,538898..538903,538997..538999, 539099..539101,539105..539110,539183..539188) /locus_tag="Acear_0496" /note="active site" /db_xref="CDD:29953" misc_feature order(538766..538774,538874..538879,538886..538888, 538895..538897,538904..538906) /locus_tag="Acear_0496" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29953" gene 539245..539712 /locus_tag="Acear_0497" /db_xref="GeneID:9512512" CDS 539245..539712 /locus_tag="Acear_0497" /note="COGs: COG0622 phosphoesterase; InterPro IPR000979:IPR004843; KEGG: cpr:CPR_2238 Ser/Thr protein phosphatase family protein; PFAM: metallophosphoesterase; SPTR: C6Q2F4 phosphodiesterase, MJ0936 family; TIGRFAM: phosphodiesterase, MJ0936 family; TIGRFAM: phosphoesterase, MJ0936 family" /codon_start=1 /transl_table=11 /product="phosphodiesterase, MJ0936 family" /protein_id="YP_003827108.1" /db_xref="GI:302391288" /db_xref="GeneID:9512512" /translation="MKILCTSDTHGNTEKLKEVVKSVEGIDILLHAGDHIGDVDAIDQ SEFDVFKVKGNCDRGVKGKSKEVITMEDKKILLTHGHQYEIKYGLQKLSYQAAEVEAD IVVFGHTHRSLSLNEEGILYFNPGSITYPRDDSASCGILEIKDGKVEGELKRL" misc_feature 539248..539703 /locus_tag="Acear_0497" /note="Escherichia coli YfcE and related proteins, metallophosphatase domain; Region: MPP_YfcE; cd00841" /db_xref="CDD:163617" misc_feature order(539266..539268,539272..539274,539344..539346, 539407..539412,539479..539481,539566..539568, 539572..539574) /locus_tag="Acear_0497" /note="active site" /db_xref="CDD:163617" misc_feature order(539266..539268,539272..539274,539344..539346, 539407..539409,539479..539481,539566..539568, 539572..539574) /locus_tag="Acear_0497" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163617" misc_feature order(539323..539328,539392..539394,539401..539415, 539437..539466,539485..539487) /locus_tag="Acear_0497" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:163617" gene 539863..539939 /locus_tag="Acear_R0044" /db_xref="GeneID:9512513" tRNA 539863..539939 /locus_tag="Acear_R0044" /product="tRNA-Gly" /db_xref="GeneID:9512513" gene 539947..540023 /locus_tag="Acear_R0045" /db_xref="GeneID:9512514" tRNA 539947..540023 /locus_tag="Acear_R0045" /product="tRNA-Arg" /db_xref="GeneID:9512514" gene 540033..540109 /locus_tag="Acear_R0046" /db_xref="GeneID:9512515" tRNA 540033..540109 /locus_tag="Acear_R0046" /product="tRNA-His" /db_xref="GeneID:9512515" gene 540120..540196 /locus_tag="Acear_R0047" /db_xref="GeneID:9512516" tRNA 540120..540196 /locus_tag="Acear_R0047" /product="tRNA-Arg" /db_xref="GeneID:9512516" gene 540205..540280 /locus_tag="Acear_R0048" /db_xref="GeneID:9512517" tRNA 540205..540280 /locus_tag="Acear_R0048" /product="tRNA-Lys" /db_xref="GeneID:9512517" gene 540306..540380 /locus_tag="Acear_R0049" /db_xref="GeneID:9512518" tRNA 540306..540380 /locus_tag="Acear_R0049" /product="tRNA-Gly" /db_xref="GeneID:9512518" gene 540566..541846 /locus_tag="Acear_0498" /db_xref="GeneID:9512519" CDS 540566..541846 /locus_tag="Acear_0498" /note="COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR008881:IPR001179:IPR008880:IPR005215; KEGG: hor:Hore_14950 trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type; SPTR: B8CY75 Trigger factor; TIGRFAM: trigger factor; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor" /codon_start=1 /transl_table=11 /product="trigger factor" /protein_id="YP_003827109.1" /db_xref="GI:302391289" /db_xref="GeneID:9512519" /translation="MKVSQEMIEENKVKLDVEVEAEETNKALEEAYKEVVKDVEIDGF RKGKVPRQVLEAKYGKEILHKDALDILIPKAYREAVEEAGIEPIDQPEINDFSIEEDK PTTFTAEVEIKPEVELGEYTDLDIEQEAEEITEEDVQEELNNRRERFAELKVTDRDEV QEGDYVVIDFEGYVDGEPFEGGSAEEYTLEIGSGDFIPGFEEQLVGAKVGEEVEVDVT FPEEYQQDDLAGEGAVFKVDVKEIKEKELPELDDELAQEVGDFETLDELKDDITNKLK EEAERKAKNKFTNELVEAISENAEVNIPETMVEDELDLMVDTMKQRLQQQGMDFEQYL EMTGNDEASFREENREEARKRVKSSLALEEIAEEEDIDVTEEEIENKIEEIADQQEQD PEMVKAMLQMQGQYESLIESIQNEKVLDFLTENN" misc_feature 540566..541840 /locus_tag="Acear_0498" /note="trigger factor; Provisional; Region: tig; PRK01490" /db_xref="CDD:179299" misc_feature 541037..541282 /locus_tag="Acear_0498" /note="FKBP-type peptidyl-prolyl cis-trans isomerase; Region: FKBP_C; cl11587" /db_xref="CDD:187101" misc_feature 541352..541837 /locus_tag="Acear_0498" /note="Bacterial trigger factor protein (TF) C-terminus; Region: Trigger_C; pfam05698" /db_xref="CDD:191345" gene 541912..542511 /locus_tag="Acear_0499" /db_xref="GeneID:9512520" CDS 541912..542511 /locus_tag="Acear_0499" /EC_number="3.4.21.92" /note="COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR018215:IPR001907; KEGG: swo:Swol_1656 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: A1HP68 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease proteolytic subunit ClpP" /protein_id="YP_003827110.1" /db_xref="GI:302391290" /db_xref="GeneID:9512520" /translation="MSGLVPMVVEQTNRGERSYDIYSRLLKDRIVFIGSPINDEIANL VIAQLLFLEAEDPDKDIYIYINSPGGSVTSALAIYDTMQYIKPDVSTISMGLAASAGA LLLASGAEGKRYALPYSRIMIHQPAGGAEGRAADIEIQAQEILDLRKILNNILADHTG QPLEKIEEDVDRDFFMSSEDAKEYGIIDEVISRQEDLDG" misc_feature 541969..542481 /locus_tag="Acear_0499" /note="Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease; Region: S14_ClpP_2; cd07017" /db_xref="CDD:132928" misc_feature order(542005..542007,542011..542013,542038..542043, 542050..542055,542062..542064,542107..542109, 542128..542130,542140..542142,542149..542151, 542158..542163,542173..542175,542197..542199, 542263..542265,542269..542271,542287..542298, 542338..542340,542347..542349,542353..542355, 542359..542361,542428..542430,542434..542436) /locus_tag="Acear_0499" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:132928" misc_feature order(542206..542208,542281..542283,542428..542430) /locus_tag="Acear_0499" /note="active site residues [active]" /db_xref="CDD:132928" gene 542532..543782 /locus_tag="Acear_0500" /db_xref="GeneID:9512521" CDS 542532..543782 /locus_tag="Acear_0500" /EC_number="3.4.21.92" /note="COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterProIPR003593:IPR004487:IPR010603:IPR013093:IPR 019489; KEGG: hor:Hore_14930 ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA; zinc finger C4 domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: B8CY73 ATP-dependent Clp protease ATP-binding subunit clpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease ATP-binding subunit ClpX" /protein_id="YP_003827111.1" /db_xref="GI:302391291" /db_xref="GeneID:9512521" /translation="MFKFGDEEEGQLKCSFCGKVQEQVQKLVAGPGVYICDECIELCN EIIEEELNEEMDVGFNNVPNPQEIKDILDQYVIGQERAKKTLSVAVYNHYKRVNSGMQ VDDVELEKSNICLIGPTGCGKTLLAQTLAKILDVPFAIADATSLTEAGYVGEDVENIL LKLIQAADYDVEKAEQGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTEA SVPPQGGRKHPHQEFIQIDTTNILFICGGAFNGLDDIIKSRIDEKVMGFGADIKSEKD EDIGEVLKHVKSQDVLKYGLIPEFVGRIPVLATLDQLGEDALVEILTEPRNALVKQYT KFFELDGVDLEFTEDALHAIADKALEHDTGARGLRSIVEESILEIMYDLPSQNNIEKC IITEDVVYEGATPKLVRINQEETA" misc_feature 542544..543758 /locus_tag="Acear_0500" /note="ATP-dependent protease ATP-binding subunit ClpX; Provisional; Region: clpX; PRK05342" /db_xref="CDD:180029" misc_feature 542565..>542642 /locus_tag="Acear_0500" /note="ClpX C4-type zinc finger; Region: zf-C4_ClpX; pfam06689" /db_xref="CDD:148346" misc_feature 542760..543323 /locus_tag="Acear_0500" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 542880..542903 /locus_tag="Acear_0500" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(542883..542906,543075..543077,543249..543251) /locus_tag="Acear_0500" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 543063..543080 /locus_tag="Acear_0500" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 543306..543308 /locus_tag="Acear_0500" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 543468..543704 /locus_tag="Acear_0500" /note="C-terminal, D2-small domain, of ClpB protein; Region: ClpB_D2-small; pfam10431" /db_xref="CDD:192583" gene 543924..545600 /locus_tag="Acear_0501" /db_xref="GeneID:9512522" CDS 543924..545600 /locus_tag="Acear_0501" /EC_number="3.4.21.53" /note="COGs: COG1067 ATP-dependent protease; InterProIPR008268:IPR001984:IPR020568:IPR003593:IPR 014251:IPR003959:IPR008269; KEGG: drm:Dred_2560 ATPase central domain-containing protein; PFAM: peptidase S16 lon domain protein; ATPase AAA; PRIAM: Endopeptidase La; SMART: AAA ATPase; SPTR: A4J7L7 AAA ATPase, central domain protein; TIGRFAM: ATP-dependent protease LonB; PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease LonB; lon-related ATP-dependent protease" /codon_start=1 /transl_table=11 /product="ATP-dependent protease LonB" /protein_id="YP_003827112.1" /db_xref="GI:302391292" /db_xref="GeneID:9512522" /translation="MNIFGIVQFFFAVVIGLYFWNLLRKQQKNKRAVVKESKKEMKKL KKMRQRSLTEPLSEKTRPDDFEEIVGQEDGLKALEAALCGPNPQHVIVYGPPGIGKTA AARLVLERAKQNEDSPFNEESKFVELDATTARFDERGIADPLIGSVHDPIYQGAGAMG SAGIPQPKPGAVTKAHGGLLFIDEIGELHPIQMNKLLKVLEDRKVFLKSSYYHEEDDN IPQYIHEIFQQGLPADFRMVGATTRKPEEIPPAIRSRCLEVYFKPLTPKDIDKIARNA ANKAGFAIEDGAVEVIKDYSNNGRDTVNMVQTAGGLVLSEDRKVKKITTADIEWVVNS GKYDPRPDKDVNDKPQVGVVNGLAVKGPNLGILIELEVSAIEVESGTGDINVTGIIEE EEVGNRQRKVRRKSMVKGSIENVMTTLRKFIDVNPKDYDLHVNFPGGIPLDGPSAGIT VATAIYSALTKKPVDNSVAMTGELSIRGLVKPIGGVLSKIEAAKRAGAKKVIIPAENW QENFAEFDEIEIIKVNNLKEVLDNAVLNEEVKIDSQIEENVNFLTASSIS" misc_feature 543927..545522 /locus_tag="Acear_0501" /note="ATP-dependent protease LonB; Region: spore_lonB; TIGR02902" /db_xref="CDD:131948" misc_feature 544128..544712 /locus_tag="Acear_0501" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 544203..544226 /locus_tag="Acear_0501" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(544206..544229,544470..544472,544647..544649) /locus_tag="Acear_0501" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 544458..544475 /locus_tag="Acear_0501" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 544686..544688 /locus_tag="Acear_0501" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 544887..545522 /locus_tag="Acear_0501" /note="Lon protease (S16) C-terminal proteolytic domain; Region: Lon_C; pfam05362" /db_xref="CDD:191262" gene 545675..548011 /locus_tag="Acear_0502" /db_xref="GeneID:9512523" CDS 545675..548011 /locus_tag="Acear_0502" /EC_number="3.4.21.53" /note="COGs: COG0466 ATP-dependent Lon protease; InterProIPR008268:IPR001984:IPR020568:IPR003111:IPR 003593:IPR004815:IPR003959:IPR008269; KEGG: hor:Hore_14910 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA; PRIAM: Endopeptidase La; SMART: peptidase S16 lon domain protein; AAA ATPase; SPTR: B8CY71 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La" /codon_start=1 /transl_table=11 /product="ATP-dependent proteinase" /protein_id="YP_003827113.1" /db_xref="GI:302391293" /db_xref="GeneID:9512523" /translation="MVEEIDTTEIKDELPLLVLRGLVVFPHMVIPLLVGRDKSVEALE EAMVEDRLILLAAQKDETVEEPETEEIYDMGTVAQVKQLVKLPDGTIKILVEGLKRAK IDEFLQEDPYFKIRLQEIEPEEKESKELEALMRSLVNRFEEYVKLNQKLPPETMMTVA NVEDPGRLVDVMVSHMSLKVDQEQEILQAVSYKERLKQLYKLLDEEIEVLEVKDKINS EVREQVEKRQKEYYLKEQLKAIKKELGQDEEMSDEIEEYRTKIEEADLPEEVEEKALK EVDRLTRMPPMANEGVVVRNYLDCILDLPWNEKSQDRLVLDDAEEILERDHYGLEDVK DRILEYLAVRKLTDEMKSPILCLVGPPGVGKTSLGKSLAEAIGREFVRLSLGGLKDEA EIRGHRRTYVGSRPGRIINAIRDAGTNNPLFLLDEVDKIQSDFRGDPAAALLEVLDPE QNDTFTDHYLELPFDLSDVIFITTANVTHTIPGPLQDRMEVIEIAGYTEEDKVKIAQE HLLPKQIENHGLSEDQINVSENAIRKLIRNYTRESGVRNLERKLAGVCRKVAKEVVKG KERLSRVTVQNVDSYLGIEKFNYGEVDEESQVGVATGLAWTKSGGDILKIEVSVVPGK GKLLLTGKLGDVMKESGQAALSYARSKIEEFELEEDFHENYDIHIHVPKGAIPKDGPS AGITITTAIISALSGRKVNSKVAMTGEITLRGRVLPVGGVESKVLAAHRAGIETVIMS EENEKNLDEVPDNIKRDLEFKFVEHMDEVTDTALLKEE" misc_feature 545711..548008 /locus_tag="Acear_0502" /note="ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]; Region: Lon; COG0466" /db_xref="CDD:30814" misc_feature 545711..>545854 /locus_tag="Acear_0502" /note="Found in ATP-dependent protease La (LON); Region: LON; cl01056" /db_xref="CDD:141077" misc_feature 546674..547150 /locus_tag="Acear_0502" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 546749..546772 /locus_tag="Acear_0502" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(546752..546775,546950..546952,547094..547096) /locus_tag="Acear_0502" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 546938..546955 /locus_tag="Acear_0502" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 547136..547138 /locus_tag="Acear_0502" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 547391..548002 /locus_tag="Acear_0502" /note="Lon protease (S16) C-terminal proteolytic domain; Region: Lon_C; pfam05362" /db_xref="CDD:191262" gene 548014..548598 /locus_tag="Acear_0503" /db_xref="GeneID:9512524" CDS 548014..548598 /locus_tag="Acear_0503" /note="COGs: COG0218 GTPase; InterPro IPR019987:IPR005225:IPR002917; KEGG: lrf:LAR_0631 GTP-binding protein; PFAM: GTP-binding protein HSR1-related; SPTR: C7XTP6 Ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain" /codon_start=1 /transl_table=11 /product="ribosome biogenesis GTP-binding protein YsxC" /protein_id="YP_003827114.1" /db_xref="GI:302391294" /db_xref="GeneID:9512524" /translation="MNLNNVKYLCSATSPADYPRHNLPEIALAGRSNVGKSSLINQMV NRNRFAHTSSKPGKTQTLNFYNIDNIFSFVDLPGYGFARVPDEVKDKWSEMIEEYLFH RSNLAGVILIVDARHEPTDDDLMMYEWLLEMQLPHLVVGTKVDKLSNSQLKPNRKQIF DKLRLEPQTPFTYFSAEEGTGKNEVWSFIKEITS" misc_feature 548086..548592 /locus_tag="Acear_0503" /note="The YihA (EngB) subfamily. This subfamily of GTPases is typified by the E. coli YihA, an essential protein involved in cell division control. YihA and its orthologs are small proteins that typically contain less than 200 amino acid residues and...; Region: YihA_EngB; cd01876" /db_xref="CDD:133278" misc_feature 548101..548124 /locus_tag="Acear_0503" /note="G1 box; other site" /db_xref="CDD:133278" misc_feature order(548107..548127,548167..548175,548182..548190, 548236..548238,548440..548442,548446..548448, 548536..548541) /locus_tag="Acear_0503" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133278" misc_feature 548179..548199 /locus_tag="Acear_0503" /note="Switch I region; other site" /db_xref="CDD:133278" misc_feature 548188..548190 /locus_tag="Acear_0503" /note="G2 box; other site" /db_xref="CDD:133278" misc_feature 548236..548247 /locus_tag="Acear_0503" /note="G3 box; other site" /db_xref="CDD:133278" misc_feature order(548245..548256,548275..548319,548326..548331) /locus_tag="Acear_0503" /note="Switch II region; other site" /db_xref="CDD:133278" misc_feature 548437..548448 /locus_tag="Acear_0503" /note="G4 box; other site" /db_xref="CDD:133278" misc_feature 548536..548544 /locus_tag="Acear_0503" /note="G5 box; other site" /db_xref="CDD:133278" gene 548678..549181 /locus_tag="Acear_0504" /db_xref="GeneID:9512525" CDS 548678..549181 /locus_tag="Acear_0504" /note="COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR012349:IPR009002:IPR002563; KEGG: nth:Nther_2040 flavin reductase domain protein FMN-binding; PFAM: flavin reductase domain protein FMN-binding; SPTR: B2A716 Flavin reductase domain protein FMN-binding; PFAM: Flavin reductase like domain" /codon_start=1 /transl_table=11 /product="flavin reductase domain protein FMN-binding protein" /protein_id="YP_003827115.1" /db_xref="GI:302391295" /db_xref="GeneID:9512525" /translation="MKSEYPIDQTGEIFPHFPVVLTTIGDNIITLEFVQFFSFESPII GIGINSDNYSHQLLKEEKEFVINIPTTELIDEVKFCGNNSGRNLDKFSATGLTSKPSE IINSWLIEECPINIECRVIQEERIGNCDWFFGEIMKVHVTEDHNRLNALLYSGNSAQD FKLRELK" misc_feature 548678..549148 /locus_tag="Acear_0504" /note="Flavin Reductases; Region: FlaRed; cl00801" /db_xref="CDD:193940" gene 549265..550716 /locus_tag="Acear_0505" /db_xref="GeneID:9512526" CDS 549265..550716 /locus_tag="Acear_0505" /EC_number="4.1.1.-" /note="COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; InterPro IPR002830; KEGG: hor:Hore_14820 UbiD family decarboxylase; PFAM: carboxylyase-related protein; SPTR: B8CY62 UbiD family decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases" /codon_start=1 /transl_table=11 /product="3-octaprenyl-4hydroxybenzoate decarboxylase" /protein_id="YP_003827116.1" /db_xref="GI:302391296" /db_xref="GeneID:9512526" /translation="MAYKNLKEFIKLLETEGLLTRITAEVSSELEITEITDRISKEVG PALLFENVKESEFPVLINAFGSYERMEAALEVEDLDDIGARIEELFDLPNLKDKSLLG KLKTLPKLKEISNYFPKTVRKAPCQEVVDKDPSLDELPVLKCWPQDGGKFITLPLVFT KDPETDIPNVGMYRLHVYDEQTTGMHWHMHKDGADNYRSYEDEGERMEVAVALGGDPA TIYSATAPLPKQIGEMLFAGFLRKEPVEMVKAKTVDIKVPAEAEIVIEGYVEPGERRR EGPFGDHTGYYSLADDYPVFHITCITHRKDAVYPTTIVGKPPMEDCYMAKATERIFLP LLKMQLPEIVDMNLPLEGVFHNCAIISIDKQYPGHAQKIMNAVWGLGQMMFTKIVIVV DKDVDVQNISETAWKVFNNIDPDRDLTVMKGPLDILDHSSSVANFGSKLGIDATKPLP GEGHNREWPDEIVMNQEIKDLVDQRWEEYGFED" misc_feature 549286..550584 /locus_tag="Acear_0505" /note="3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Region: UbiD; cl00311" /db_xref="CDD:185894" gene 550706..551551 /locus_tag="Acear_0506" /db_xref="GeneID:9512527" CDS 550706..551551 /locus_tag="Acear_0506" /EC_number="2.5.1.-" /note="COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR006371:IPR000537; KEGG: dae:Dtox_1642 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: A5D2A3 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase" /codon_start=1 /transl_table=11 /product="4-hydroxybenzoate octaprenyltransferase" /protein_id="YP_003827117.1" /db_xref="GI:302391297" /db_xref="GeneID:9512527" /translation="MKIKLIMKLIKFEHTIFALPFAYLGAVMAAQGIPAIGKIVWITL AMVGARSAAMAWNRLTDWKVDAVNPRTEDRILPQNLLSKAEVILFIIGSLGLLLVAAW QLNPLAFKLSPLAVFLLIFYSYTKHFTWLCHLVLGLTLGMAPLGSWIGVTGSLSLPPV LVGAAVMFWVAGFDIIYSIQDYEFDFNYGLYSIPVRFGPQKALRITVIFHVLTFLLLI TVGYYLSLNWLYAVGIIIVGILLYIENSLVKKDFEKIKFAFFNINSVVSITIFIFTLM DYLLT" misc_feature 550739..551545 /locus_tag="Acear_0506" /note="UbiA prenyltransferase family; Region: UbiA; cl00337" /db_xref="CDD:193776" gene 551576..552673 /locus_tag="Acear_0507" /db_xref="GeneID:9512528" CDS 551576..552673 /locus_tag="Acear_0507" /note="COGs: COG1060 Thiamine biosynthesis protein ThiH; InterProIPR013785:IPR006638:IPR020050:IPR005244:IPR 007197; KEGG: dae:Dtox_1643 radical SAM domain protein; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B0TFS5 Putative uncharacterized protein; PFAM: radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003827118.1" /db_xref="GI:302391298" /db_xref="GeneID:9512528" /translation="MVNELFSDSELEEIGDKVLAGERLTREDGIKLMKSNDLLTIGYL ADYRRQEKCGDEVYYIKNRHINHTNVCEVQCRFCAFGREEDEDGAYTMELNEIAEAID KSPDGISELHIVGGCHHDLSLEYFEEMLRLAKDKLPEVYIQAFTVVEIAHLADKSGLT VKETLKRLKQAGLDSIPGGGAEVFSPRVREKVCKDKVSGERWLSVMETAHNLGIKTNA TMLYGHVETPEERIDHLIKLRELQDKTEGFLTFIPLAFHPENTELNYLSATTGYDDLK VLAIARLMLDNFAHIKAFWIMLGTKLAQISLSFGVDDLDGTVVEEKITHDAGAQTKQG LTEAEIVNMIKEAGRIPVERDTVYNRVGDVK" misc_feature 551615..552658 /locus_tag="Acear_0507" /note="putative menaquinone biosynthesis protein, SCO4494 family; Region: mena_SCO4494; TIGR03700" /db_xref="CDD:163412" misc_feature 551777..552415 /locus_tag="Acear_0507" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature order(551786..551788,551792..551794,551798..551800, 551804..551812,551915..551917,551921..551926, 552008..552013,552041..552043,552113..552115, 552236..552238,552332..552337) /locus_tag="Acear_0507" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" gene 552676..553524 /locus_tag="Acear_0508" /db_xref="GeneID:9512529" CDS 552676..553524 /locus_tag="Acear_0508" /note="COGs: COG1427 periplasmic solute-binding protein; InterPro IPR003773; KEGG: dau:Daud_1090 hypothetical protein; PFAM: protein of unknown function DUF178; SPTR: B1I3P2 Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827119.1" /db_xref="GI:302391299" /db_xref="GeneID:9512529" /translation="MTELKLGVVEYINCWPVHYGFDYDEVDIEAEIVAGPPAELNEMF LRGEIDITPMSSIEYARNFDDCYILPDLAIASDGPVGSLFLFSELEIEDFNGKTVALP EDSRATVALLKILLERYYQVDVDYITCEQDLDYMLDVADAALLIGDPALNGYIKYRNS ELKITDLGGAWKNLTGEKMVYAIWVIRKEFADRNPKLVDEISDKLLESKYLGLDQFEL LAKRASKELDISEDIGLKYFQSLRYDFDEDYQQGVMEYFTDAYELGLVKEKPELHIWG ETDGRS" misc_feature 552685..553461 /locus_tag="Acear_0508" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature 552688..553488 /locus_tag="Acear_0508" /note="Predicted periplasmic solute-binding protein [General function prediction only]; Region: COG1427" /db_xref="CDD:31616" gene 553511..554590 /locus_tag="Acear_0509" /db_xref="GeneID:9512530" CDS 553511..554590 /locus_tag="Acear_0509" /note="COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR013785:IPR020050:IPR005244:IPR007197; KEGG: drm:Dred_2193 radical SAM domain-containing protein; PFAM: radical SAM domain protein; SPTR: A4J6K5 radical SAM domain protein; PFAM: radical SAM superfamily; TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; radical SAM domain protein, CofH subfamily" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003827120.1" /db_xref="GI:302391300" /db_xref="GeneID:9512530" /translation="MAEVKDILAKAQQDKRLTLAEGVKLLASDKLLAIGKAADRVRRR LHSENKVTFAIDRNINYTNVCEAGCKFCAFYQQLNDSEAYLLEHDEIFRKIEETIELG GTQILMQGGLHPKLDIDYYLELFRAIKERFKIHLHSLSPPEIAYIAQQSNLTLKETLT RLQQAGLDSLPGGGAEMLVDRVREEISPNKVTSDEWLEVMQTAHEIGMRSTATMMFGS IETLADRIEHLIKIRKLQDKTGGFTAFIPWAFQPTNTALEDHPKVSKVTGSEYLKMVA VARIVLDNVDNIQASWVTQGAKVAQVSLEFGVNDFGSTMIEENVVKAAGASYRVPLEK IVELIKDTGRRPVQRNTLYQELKGY" misc_feature 553553..554578 /locus_tag="Acear_0509" /note="menaquinone biosynthesis protein, SCO4550 family; Region: mena_SCO4550; TIGR03699" /db_xref="CDD:163411" misc_feature 553685..554197 /locus_tag="Acear_0509" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene 554611..555957 /locus_tag="Acear_0510" /db_xref="GeneID:9512531" CDS 554611..555957 /locus_tag="Acear_0510" /note="COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR011059:IPR006680; KEGG: ele:Elen_2834 amidohydrolase; PFAM: amidohydrolase; SPTR: C1UD46 Cytosine deaminase-like metal-dependent hydrolase; PFAM: Amidohydrolase family" /codon_start=1 /transl_table=11 /product="amidohydrolase" /protein_id="YP_003827121.1" /db_xref="GI:302391301" /db_xref="GeneID:9512531" /translation="MILTAQWVLPIEREAISNGAVVVEDGYIEAVGHKDEIVDNYPEE EVKDLGSAIILPGMVNIHTHLDYTALRGENDNLPFLPWIGNLVHKSRALTQDEVLLSA KLGALELLASGVTAVGDTTATGASLQAAVWSGLRGVVYQEVFGMDDEKIDETLSDLEE NFRNLKEDSNSRLSVGLSPHAPYSVSRWLLKEISSWAEQEGIPLSMHLAETEEELSFL KEGTGPFATTYRQAVGWEDIPWQEPGLSPVEYLADLDILTENLLLVHLVQTEREEFDL LQQFDVKVAHCPKSNAKLGTGIADLSAMLDSDLTVGLGTDSAASNNSLDLFSEMEFGV LLQRANQKKADAVTAEEIVRLATIKGAEALGLDEEIGSLKPGKKADLTAVRIDNPANQ PVYDPYSALVYTASSRDVILTMIAGEEVYEAGEFKNIIVDDVVAKIDWITDKVDKL" misc_feature 554611..555930 /locus_tag="Acear_0510" /note="N-ethylammeline chlorohydrolase; Provisional; Region: PRK09045" /db_xref="CDD:181622" misc_feature 554632..555891 /locus_tag="Acear_0510" /note="TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are...; Region: ATZ_TRZ_like; cd01298" /db_xref="CDD:30041" misc_feature order(554794..554796,554800..554802,555229..555231, 555238..555240,555403..555405,555556..555558) /locus_tag="Acear_0510" /note="active site" /db_xref="CDD:30041" misc_feature order(554872..554874,554881..554883,554962..554967, 555031..555036) /locus_tag="Acear_0510" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:30041" gene 555975..556547 /locus_tag="Acear_0511" /db_xref="GeneID:9512532" CDS 555975..556547 /locus_tag="Acear_0511" /note="COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; InterPro IPR003382:IPR004507; KEGG: bha:BH1651 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; SPTR: Q9KCC2 Probable aromatic acid decarboxylase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases" /codon_start=1 /transl_table=11 /product="3-octaprenyl-4-hydroxybenzoate carboxy-lyase" /protein_id="YP_003827122.1" /db_xref="GI:302391302" /db_xref="GeneID:9512532" /translation="MKRYIVGITGASGSIYAKRLLEVLEAKEAEVYVTVTEAGRQVWN DELEVNIRQQLGDNKDSNSIIYLDNQNLSAPIASGSFQTDGMIVIPCSMATLASITQG HSSNLLERAADVALKEKRQLIAVPRETPLNTIHLENMLKLSKLGADIIPPMPAFYNQP ETIDDLVNFVVGRVLDRLGVEHDIYQRWKD" misc_feature 555975..556544 /locus_tag="Acear_0511" /note="aromatic acid decarboxylase; Validated; Region: PRK05920" /db_xref="CDD:180312" misc_feature 555978..556355 /locus_tag="Acear_0511" /note="Flavoprotein; Region: Flavoprotein; cl08021" /db_xref="CDD:195652" gene 556902..559553 /locus_tag="Acear_0512" /db_xref="GeneID:9512533" CDS 556902..559553 /locus_tag="Acear_0512" /EC_number="6.1.1.9" /note="COGs: COG0525 Valyl-tRNA synthetase; InterProIPR014729:IPR011321:IPR001412:IPR019754:IPR 009080:IPR009008:IPR010978:IPR002303:IPR002300:IPR013155:I PR019499; KEGG: hor:Hore_14590 valyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; SPTR: B8CY39 Valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="valyl-tRNA synthetase" /protein_id="YP_003827123.1" /db_xref="GI:302391303" /db_xref="GeneID:9512533" /translation="MSKKKMATTYDPAAVEDKWYEYWMENDCFGAEVDEDKESFTIVM PPPNVTGQLHIGHALDNTLQDILIRWKRMQGYSALWIPGTDHASIATEVKVVNKLREE EGLEKDDVGREGFLKRAWDWKEEYGGRITDQLKKLGTSCDWSRERFTMDEGCSKAVKE AFIQLYEKDLIYRGDYIINWCPDCGTTLSDIEVEHEEIPGHFYHIKYDLKDSDDHLVV ATTRPETMLGDTAIAVNPSDERYQDLIGKTAILPVVGRELPIIADEFVDSDFGTGLVK VTPAHDPNDFEMGQRNDLEIVKVIDDQAKMTAEAGKYEGMDRYECREQLVEDLKETGQ LIEIEEHDHSVGHCYRCDTVIEPLVSKQWFVKMDPLAKPAIEAVEESETDFVPDRFTK VYRNWMENIRDWCISRQLWWGHRIPVWYCQDCEEEIVAREEPASCPECGGDDLKQDED VLDTWFSSGLWPFSTLGWPEETEELEYYYPTSVLVTGRDIIFFWVARMIFSGLEFMEE TPFSDVLVHGLVRDAQGRKMSKSLGNGIDPIEFIDEYGADTLRFTLVTGNTPGNDMRF RQEKVEASRNFVNKIWNASRFVLMNLEDFDPEEVEELDYTLADKWIISRLNETAQEVT RTLDKYQIGNAAQTLYDFIWNEFCDWYIELIKPRLYQDEDQVVKETAQYVVSSVLEQS LRLLHPFMPFVTEEIWQKLPYEGETIMTAIWPDETETETYEAAEEKMEVIMNVITAVR NIRNEMKVNPGKEIEAILEPENDKKEEILTVGRDYIMDLGKISNLKVEQDLDETPEKA STAITDNIEVILPLAGMVDLKKEIERLKDELDEVKYEIERAEGKLANEGFVNNAPEEL VEEEREKVKDYKAKKEQLLERLEMLKE" misc_feature 556905..559550 /locus_tag="Acear_0512" /note="valyl-tRNA synthetase; Reviewed; Region: valS; PRK05729" /db_xref="CDD:180225" misc_feature 557013..>557480 /locus_tag="Acear_0512" /note="nucleotidyl transferase superfamily; Region: nt_trans; cl00015" /db_xref="CDD:193613" misc_feature 557061..557072 /locus_tag="Acear_0512" /note="active site" /db_xref="CDD:173912" misc_feature 557061..557072 /locus_tag="Acear_0512" /note="HIGH motif; other site" /db_xref="CDD:173912" misc_feature order(557061..557063,557070..557072) /locus_tag="Acear_0512" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:173912" misc_feature <557943..558599 /locus_tag="Acear_0512" /note="catalytic core domain of valyl-tRNA synthetases; Region: ValRS_core; cd00817" /db_xref="CDD:185677" misc_feature order(558264..558266,558273..558275,558357..558362, 558366..558371,558381..558383,558450..558461, 558483..558485) /locus_tag="Acear_0512" /note="active site" /db_xref="CDD:185677" misc_feature 558480..558494 /locus_tag="Acear_0512" /note="KMSKS motif; other site" /db_xref="CDD:185677" misc_feature 558597..559004 /locus_tag="Acear_0512" /note="Anticodon-binding domain of valyl tRNA synthetases; Region: Anticodon_Ia_Val; cd07962" /db_xref="CDD:153416" misc_feature order(558600..558602,558606..558611,558618..558620, 558624..558629,558636..558641,558648..558653, 558657..558662,558801..558803,558810..558812, 558831..558833,558855..558860,558867..558869) /locus_tag="Acear_0512" /note="tRNA binding surface [nucleotide binding]; other site" /db_xref="CDD:153416" misc_feature order(558639..558641,558648..558653,558657..558662, 558843..558845,558855..558860,558867..558869) /locus_tag="Acear_0512" /note="anticodon binding site; other site" /db_xref="CDD:153416" misc_feature 559350..559547 /locus_tag="Acear_0512" /note="Valyl tRNA synthetase tRNA binding arm; Region: Val_tRNA-synt_C; pfam10458" /db_xref="CDD:151031" gene 559846..561909 /locus_tag="Acear_0513" /db_xref="GeneID:9512534" CDS 559846..561909 /locus_tag="Acear_0513" /note="COGs: COG3829 transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR000014:IPR003593:IPR013767:IPR 013668; KEGG: nth:Nther_0777 sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; Ribonuclease R winged-helix domain protein; SMART: AAA ATPase; PAS domain containing protein; SPTR: A8VYB9 S-layer domain protein; TIGRFAM: PAS sensor protein; PFAM: Ribonuclease R winged-helix domain; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box" /codon_start=1 /transl_table=11 /product="sigma54 specific transcriptional regulator" /protein_id="YP_003827124.1" /db_xref="GI:302391304" /db_xref="GeneID:9512534" /translation="MSNKELAVVTISEATNNLLKEQLKEILQDRVKVKGYQINEIGSN TINSDLVLATNSLQGEIDNYITGVDDIIFARRSLDFSSLEMLIKLPDGKEVLLVNNTE MAAYETKSMLEKVGIDHINLQPFYPEKKLNKEIDLAITPGEKGYVPDTVEDIIDIGSR VLSLTTIIEALIKLDLLDEKADLLVTKHIKQLVKLSNRLYGNTKKVERINQMLEAVIN HVHDGVIYINQQEEIEIFNQKAEEIFEMKAKEAVGAKVEEKISNTKLNSILKTEDKHL NDLQDIVEKKIVTSRVPVKLDNEVIGALATFKDVTEVKKLEKNLRRKLKDKGHIAKYE FSNIVGNSTQINQTIKKAKDLAESESTILIQGESGTGKELFAQSIHNYSNREKQPFVA VNCAALPENLLESELFGYEEGAFTGAKKGGRPGVFEQAHTGTIFLDEVGDIPLKIQTN LLRVLQEEEVMRIGGTKVIPINIRVIAATNKNLRKLVKEGKFREDLYYRLSVLPLKVP ALRKRKEDIPLLIEFFLQKFNAGDLVFSERVKSRLYNYNWPGNIRELENCIEYISQTC NERVEIGDLPSHFHDEDNILRKSIEDIDCEIEDIKSELEELGDIKEYLFILNELHLAK QEGRNIGRREIAKNAKINNLHLSSHMVRSRLRKLESCRLVNIGQGRQGTKITEKGIEF LERTT" misc_feature 560464..561531 /locus_tag="Acear_0513" /note="Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:33622" misc_feature 560884..561348 /locus_tag="Acear_0513" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 560941..560964 /locus_tag="Acear_0513" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(560944..560967,561157..561159,561283..561285) /locus_tag="Acear_0513" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 561145..561162 /locus_tag="Acear_0513" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 561340..561342 /locus_tag="Acear_0513" /note="arginine finger; other site" /db_xref="CDD:99707" gene 562184..563323 /locus_tag="Acear_0514" /db_xref="GeneID:9512535" CDS 562184..563323 /locus_tag="Acear_0514" /note="COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR001261:IPR011650:IPR002933; KEGG: sth:STH1479 peptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Q67PC9 Putative peptidase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain" /codon_start=1 /transl_table=11 /product="peptidase M20" /protein_id="YP_003827125.1" /db_xref="GI:302391305" /db_xref="GeneID:9512535" /translation="MDFKEEILQFIDSNLDRFIEESIKIQQIPAPTFHEENRADYIRN RLESFARGKVQIDKVGNVIKTYTVDEDLPTVMIAAHLDTVFSKEVDLEVKREGNEIYG PGLCDNSLSLEGLVMIAEIMDKFELELNYNLILTSTVGEEGRGNLKGMQQVMEDYQDK IDTVIVLEGDGLGRITHQAVGSSRWKVEFSAKGGHSWGDFGNSSAVHTMSKIISALSD FELPTEPKTTFNVGKVAGGRAVNAIASKAEMLLEVRSVGEEALAEVSQEFKKIIQEVC RQNGVEVGFENIGKRPAGGLNKEHQLVKLLKRIHQRLDLSSSFKPGSTDGNLPLNLGI PAVTIGLTKGVNLHSTDEYIEVKPLKKGLQQLILIVLQIEDYIKS" misc_feature 562196..563251 /locus_tag="Acear_0514" /note="Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]; Region: ArgE; COG0624" /db_xref="CDD:30969" misc_feature 562238..563251 /locus_tag="Acear_0514" /note="M20 Peptidases, Poly(aspartic acid) hydrolase-like proteins; Region: M20_PAAh_like; cd03896" /db_xref="CDD:193516" misc_feature order(562421..562423,562502..562504,562604..562609, 562685..562687,563225..563227) /locus_tag="Acear_0514" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:193516" gene 563456..564862 /locus_tag="Acear_0515" /db_xref="GeneID:9512536" CDS 563456..564862 /locus_tag="Acear_0515" /note="COGs: COG1757 Na+/H+ antiporter; InterPro IPR004770:IPR018461; KEGG: vfm:VFMJ11_1766 Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like; SPTR: B7AWI0 Putative uncharacterized protein; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter family; TIGRFAM: Na+/H+ antiporter NhaC" /codon_start=1 /transl_table=11 /product="transporter, NhaC family (TC 2.A.35)" /protein_id="YP_003827126.1" /db_xref="GI:302391306" /db_xref="GeneID:9512536" /translation="MEKTKELPSMGKVFLVLGGFLALAFAFTTLGISIHLAIFSGWFL AIGVGLSLGYTYEELEDAISDGIHNGMSAVIILLAVGALVGTWISGGIVPTIIYYGLK TIHPSIFFLATLIICTLTSLSTGTSWGAAGTAGIAMMGIGAGLGVPDPMTAGAVLSGA YFGDKLSPLSDSTILSASMSDVDVIEHVKGMFPASVVGYAIAAIGFTILGFNVGGGST DLNRVNEVMNAIEGMYNINPLSFLPLVIVIGLLIMEKPSIPVITFGSVLGIIWGIGFQ GLEPVKAIGTAWSQIPKDTGMEFIDSILSRGGMQSMLWSVGVILFGLGFGGLLDEIGI LEAIAKKVEKGINSGGSLTVTTILVGFLGNLFGSAMYVSLILTPKIMEKKYDELGYDR KVLSRNTEFGGTLTSGMIPWSDNGIYMAGILGVSTLDYLPYMWLAFACIGVSIIYGFT DKFMYRVDDEATDDGMTV" misc_feature 563549..564823 /locus_tag="Acear_0515" /note="Na+/H+ antiporter NhaC; Region: antiport_nhaC; TIGR00931" /db_xref="CDD:188097" misc_feature 563930..564805 /locus_tag="Acear_0515" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene 565469..566509 /locus_tag="Acear_0516" /db_xref="GeneID:9512537" CDS 565469..566509 /locus_tag="Acear_0516" /note="COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR020827:IPR006034:IPR006033; KEGG: bcb:BCB4264_A3116 L-asparaginase; PFAM: Asparaginase/glutaminase; SPTR: B7AWH9 Putative uncharacterized protein; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I" /codon_start=1 /transl_table=11 /product="L-asparaginase, type I" /protein_id="YP_003827127.1" /db_xref="GI:302391307" /db_xref="GeneID:9512537" /translation="MKKILFITTGGTIASSEGDNGLEPSFDAEELLAHIPEIRDLCDI NGKLVMNIDSTNMRPTSVKKIAETVFENYDDYDGFVVTHGTDTMGYTSSLLTYMLSNI KKPVVVTGSQVAIGQPYTDAKKNISDAVRFALEGVPGIFVAFDGKIINGTRAIKMRSK SMNAFESINRPYVASIKLGKITYNGDSRGNEYENEYEIMNIDPSEPFRLRTDLCTDVF VLKLYPGIDPDIFDFIKENYKGLVIETFGLGGIPNLEDYNIVSKVKEVIEAGVVVAVT TQCVEEGVNLGVYEVGRDLAEHNKAIITGDMNTEAIVGKLMWALGNFNNLSDVKCFME TPIFGDMSVEEK" misc_feature 565472..566467 /locus_tag="Acear_0516" /note="Asparaginase (amidohydrolase): Asparaginases are tetrameric enzymes that catalyze the hydrolysis of asparagine to aspartic acid and ammonia. In bacteria, there are two classes of amidohydrolases, one highly specific for asparagine and localised to the...; Region: Asparaginase; cl00216" /db_xref="CDD:193714" misc_feature order(565499..565504,565529..565531,565628..565633, 565718..565726,565799..565801,565934..565936) /locus_tag="Acear_0516" /note="active site/substrate binding site [active]" /db_xref="CDD:29532" misc_feature order(565502..565504,565529..565531,565631..565645, 565652..565654,565724..565726,565736..565738, 565805..565807,565820..565828,565835..565840, 565901..565906,565916..565918,565922..565924, 565934..565945,565949..565951,565979..565987, 565991..565993,566012..566014,566018..566020, 566063..566068,566072..566077,566123..566125, 566129..566131,566135..566137,566147..566149, 566153..566155,566174..566176,566180..566182, 566204..566212,566216..566218,566222..566224, 566297..566299,566321..566326) /locus_tag="Acear_0516" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:29532" gene 566826..568046 /locus_tag="Acear_0517" /db_xref="GeneID:9512538" CDS 566826..568046 /locus_tag="Acear_0517" /EC_number="1.1.1.38" /note="COGs: COG0281 Malic enzyme; InterPro IPR016040:IPR015884:IPR012301:IPR012302; KEGG: bay:RBAM_026270 YtsJ; PFAM: malic protein NAD-binding; malic protein domain protein; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating); SPTR: A7Z7K9 YtsJ; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain" /codon_start=1 /transl_table=11 /product="Malate dehydrogenase (oxaloacetate-decarboxylating)" /protein_id="YP_003827128.1" /db_xref="GI:302391308" /db_xref="GeneID:9512538" /translation="MSLKEKALDLHEDNQGKLKVDTKVKVETEDDLSLAYSPGVAEPC LEIKDDREKIFDYTNKSNFVAVVSNGSAVLGLGDIGSEASMPVMEGKSVLFKEFGGVD AFPICLDEEDPDKLIETVKRMATTFGGINLEDIKSPECFYIEKRLKEELDIPVFHDDQ HGTAIIVLAGLINSLKLVGKEKEDVRVIVNGAGAAGTSVTKLLLAEGIGEVIVVDKEG AIYEGQDSLTESQEELARLTNPENEKGSLSQVIKGADVFIGVSVAGVLKKEMVRKMAD DPIIFPMANPEPEIWPEDAFAAGAKIVGTGRSDYPNQVNNVMAFPGLFRGALDVRAKD INEEMKVAASYALAELVSEEELTADYVIPKPFDERVGPYVAAAVAQAAVESGVARIEL DYETELEQAKELMA" misc_feature 566826..568034 /locus_tag="Acear_0517" /note="Malic enzyme [Energy production and conversion]; Region: SfcA; COG0281" /db_xref="CDD:30629" misc_feature 566868..567269 /locus_tag="Acear_0517" /note="Malic enzyme, N-terminal domain; Region: malic; pfam00390" /db_xref="CDD:144108" misc_feature 567303..567941 /locus_tag="Acear_0517" /note="NAD(P) binding domain of malic enzyme (ME), subgroup 2; Region: NAD_bind_2_malic_enz; cd05311" /db_xref="CDD:133453" misc_feature order(567399..567410,567468..567473,567603..567608, 567618..567620,567672..567680,567741..567743, 567765..567767,567771..567773) /locus_tag="Acear_0517" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:133453" gene 568081..569496 /locus_tag="Acear_0518" /db_xref="GeneID:9512539" CDS 568081..569496 /locus_tag="Acear_0518" /EC_number="4.2.1.2" /EC_number="4.3.1.1" /note="COGs: COG1027 Aspartate ammonia-lyase; InterProIPR020557:IPR000362:IPR003031:IPR008948:IPR 018951; KEGG: hor:Hore_03150 aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; SPTR: B8D1J9 Aspartate ammonia-lyase; PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase" /codon_start=1 /transl_table=11 /product="fumarase" /protein_id="YP_003827129.1" /db_xref="GI:302391309" /db_xref="GeneID:9512539" /translation="MSRIEKDFLGEMEIEDEAYYGVQSKRAAQNFMVTGVSISSELIH ALGVVKKAVTTANMNLGYLGKEKAKAIIQAAEEVREGKFDDEVILDSVQGGAGTSINM NINEIIANRALEILGYEKGDYDRVHPNTDVNMAQSTNDVIPTAIRIATLRKIDGLIEA TNLLDKRLIQKEEEFDDVLKMGRTQLQDAVPIRLGQEFGAYRKTVERFIDRIKEVRND LTEINLGATAVGTGLNADPKYIELAIKELRKSTGLKLESTDNLIDGTQNTDIFVEVSG RLKTFASSLSKIANDLRLLDSGPKAGLNEINLPAVQPGSSIMPGKVNPVIPEMVNQAS FQVLGNDQTITLASEAGQLELNVMVPVIVFNLLQSINILTNVNRIFAEKCIKDITVNK ERCEEFVDRSVGVVTALNPHIGYAKACEVAKKSLREDRPVKEIILEEDIMDEEKLSQI LNPVEMTEPGIAGKQLLPKEA" misc_feature 568087..569481 /locus_tag="Acear_0518" /note="aspartate ammonia-lyase; Provisional; Region: aspA; PRK12273" /db_xref="CDD:183393" misc_feature 568087..569376 /locus_tag="Acear_0518" /note="Aspartase; Region: Aspartase; cd01357" /db_xref="CDD:176462" misc_feature order(568363..568374,568489..568497,568630..568635, 569041..569043,569047..569049,569062..569064) /locus_tag="Acear_0518" /note="active sites [active]" /db_xref="CDD:176462" misc_feature order(568627..568638,568648..568650,568666..568671, 568687..568689,568699..568701,568711..568713, 568765..568767,568855..568860,568867..568869, 568876..568881,568885..568887,568894..568899, 568906..568908,568915..568920,568927..568932, 568936..568941,568948..568953,569101..569103, 569125..569127,569134..569142,569299..569301) /locus_tag="Acear_0518" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:176462" gene 569514..570260 /locus_tag="Acear_0519" /db_xref="GeneID:9512540" CDS 569514..570260 /locus_tag="Acear_0519" /note="COGs: COG1794 Aspartate racemase; InterPro IPR001920:IPR018187:IPR004380:IPR015942; KEGG: aoe:Clos_0547 aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: A8MLJ5 Aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase" /codon_start=1 /transl_table=11 /product="aspartate racemase" /protein_id="YP_003827130.1" /db_xref="GI:302391310" /db_xref="GeneID:9512540" /translation="MKKTVGILGGMGPQATVNLFQKVINFTDAECDQDHIQALINNNP QIPDRTEYILGDGEDLTPHLIKGAIKLQQLGADYLAMPCNTAHYFYDEVVRYMDIPFL NMIEEVAAEVDRKYGNDSKVGLLATTGTYQVGIYEKVLQESGVNLITPDESGKEAVYD VIYKVKEGFDDIKFQSVNNLLAEMKKQGVSVVILGCTELPLIKDKLDSEIDYMDCTEI LAQRIVDYASDQENSSQIEVEAEMVTQTIE" misc_feature 569517..570194 /locus_tag="Acear_0519" /note="Asp/Glu/Hydantoin racemase; Region: Asp_Glu_race; cl00518" /db_xref="CDD:193849" misc_feature 569520..570194 /locus_tag="Acear_0519" /note="aspartate racemase; Region: asp_race; TIGR00035" /db_xref="CDD:129146" gene 570313..571155 /locus_tag="Acear_0520" /db_xref="GeneID:9512541" CDS 570313..571155 /locus_tag="Acear_0520" /EC_number="4.2.1.2" /note="COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646; KEGG: amt:Amet_3413 fumarate hydratase; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; PRIAM: Fumarate hydratase; SPTR: C6PXL2 Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region" /codon_start=1 /transl_table=11 /product="fumarase alpha subunit" /protein_id="YP_003827131.1" /db_xref="GI:302391311" /db_xref="GeneID:9512541" /translation="MSINVNEITDAVAEMCMEANFILGDDIIESYHQALEREDSPVAQ EILERLIENAEIAKEEKMPICQDTGMTVVFVELGQDAEIEGGDLTEAINKGVSKGYKD GYLRKSVVDGPLERENTGDNTPAVIHTEIVPGDKLKLTVAPKGFGSENMSQIKMLKPA DGVEGVKDFVVQTVKEAGPNPCPPVVVGVGIGGTFEKAAFLAKKSLLRPVGEASEEEN IADLETELLEKVNELNIGPQGFGGKTTALAVNVETYPTHIAGLPVAVNINCHVTRHKE RTLG" misc_feature 570319..571149 /locus_tag="Acear_0520" /note="Fumarate hydratase (Fumerase); Region: Fumerase; cl00851" /db_xref="CDD:186222" gene 571171..571704 /locus_tag="Acear_0521" /db_xref="GeneID:9512542" CDS 571171..571704 /locus_tag="Acear_0521" /note="COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain; InterPro IPR004647; KEGG: cbe:Cbei_0190 fumarate hydratase; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; SPTR: A6LPV0 Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region" /codon_start=1 /transl_table=11 /product="hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit" /protein_id="YP_003827132.1" /db_xref="GI:302391312" /db_xref="GeneID:9512542" /translation="MSEIRLETPLTEEKVRELEAGDTVLISGTVYTARDAAHARLVDA LDSDKDMPFEIDGQVIYYVGPAPAKPGKPIGSAGPTTSYRMDPFAPRLIKEGLRGMIG KGYRNDEVVEAMKEEGAVYFGAIGGAAALIAQRIKEAEVIAYDDLGTEAVRRLEVEDL PVLVVIDAEGNSLYEVE" misc_feature 571177..571698 /locus_tag="Acear_0521" /note="Fumarase C-terminus; Region: Fumerase_C; cl00795" /db_xref="CDD:186192" gene 571916..573235 /locus_tag="Acear_0522" /db_xref="GeneID:9512543" CDS 571916..573235 /locus_tag="Acear_0522" /EC_number="2.3.3.1" /note="COGs: COG0372 citrate synthase; InterPro IPR016142:IPR002020:IPR016141; KEGG: cno:NT01CX_0234 citrate synthase; PFAM: citrate synthase; PRIAM: citrate (Si)-synthase; SPTR: A0Q286 citrate synthase I; PFAM: citrate synthase" /codon_start=1 /transl_table=11 /product="citrate (Si)-synthase" /protein_id="YP_003827133.1" /db_xref="GI:302391313" /db_xref="GeneID:9512543" /translation="MEINKWLEEVSKQAERVNTISEDYYDKYDIKQGLRNSDGTGVVV GFTKIGSVHGYKYVNGEKTPMEGKLFYRNLEIEDLVENISELGFENTIYLLLFGELPS EDEINNFNEVLDNYRKLPPQFTENMILKSPSNDVMNKLQRSILALYSHDEDPDTLEID KILLQSIKLIARFPTIISYGYQAKAHYFDDQSLYLHNPKKGIGTAKNILHMIRADNSY TKLEADTLDLLLVLHAEHGGGNNSAFTTHVVSSSGTDTYSAVGAAVGSLKGAKHGGAN LRVRKMIKNIQQNIDDYTDEAQLKDYLMKILKKEVFDKEGLIYGMGHAVYTKSDPRAV ILKEKAAELAKEKGRMNEFNLYSNIERLTKEIFKELRGDTNICANVDLYSGFVYDLLN IPKELYTPLFATARVASWCAHRIEQLVSDEKVIRPAYKSLKNEPKDS" misc_feature 572012..573211 /locus_tag="Acear_0522" /note="Citrate synthase (CS), citryl-CoA lyase (CCL), the C-terminal portion of the single-subunit type ATP-citrate lyase (ACL) and the C-terminal portion of the large subunit of the two-subunit type ACL. CS catalyzes the condensation of acetyl coenzyme A (...; Region: CS_ACL-C_CCL; cl00416" /db_xref="CDD:187898" misc_feature 572012..573196 /locus_tag="Acear_0522" /note="Citrate synthase; Region: Citrate_synt; pfam00285" /db_xref="CDD:189486" misc_feature order(572621..572623,572633..572635,572729..572731, 572882..572887,572909..572911,573131..573133, 573191..573193) /locus_tag="Acear_0522" /note="oxalacetate binding site [chemical binding]; other site" /db_xref="CDD:99853" misc_feature order(572621..572623,572633..572635,572726..572731, 572864..572869,572873..572887,572909..572911, 573050..573052,573131..573133) /locus_tag="Acear_0522" /note="citrylCoA binding site [chemical binding]; other site" /db_xref="CDD:99853" misc_feature order(572723..572731,572738..572740,572747..572749, 572864..572887,573041..573043,573050..573052, 573056..573058,573182..573184) /locus_tag="Acear_0522" /note="coenzyme A binding site [chemical binding]; other site" /db_xref="CDD:99853" misc_feature order(572729..572731,572882..572884,573056..573058) /locus_tag="Acear_0522" /note="catalytic triad [active]" /db_xref="CDD:99853" gene 573392..576766 /locus_tag="Acear_0523" /db_xref="GeneID:9512544" CDS 573392..576766 /locus_tag="Acear_0523" /note="InterPro IPR002052:IPR002296:IPR011639; KEGG: sun:SUN_2234 hypothetical protein; PFAM: Eco57I restriction endonuclease; SPTR: C7XNH4 N-6 DNA methylase; PFAM: Eco57I restriction endonuclease" /codon_start=1 /transl_table=11 /product="Eco57I restriction endonuclease" /protein_id="YP_003827134.1" /db_xref="GI:302391314" /db_xref="GeneID:9512544" /translation="MADLFNKQVLQTQLKNHSIPDYEDKLDTIRSWKRNLKSIIGANE ERLQASFLKGIFGIVLGYRDMTEADGDGEYTLEIEPSTEVDATKPDGSLGFYHQEEDG STEAVIELKGPKTSLDKQQKRSGKYYGTPVEQAFGYASKYDGCKWVIVSNMIEIRLYT VIRGQGHYEVFRVDELDQEENFKKFHLLLSRNNLLSKQGKSMTQQLSEETEQQEENIS VEFYNLYKETRVELFEHLKENNSDYEEDLLLDKAQKFLDRIIFICFCEDLGLLPAEIL HKAIDRGTDSYSFSEVTVWQEIKGVFRAIDTGSEQHNINAYNGGLFKPDEVLDSLVIK NDFFTVIDEISAYDFDSELDVNILGHVFEQSISDIEEIKADIQNDDYDRQESKRKKDG IYYTPEYITKYIVENSVGKYLEDIRRELGENELPDIEEADTPQLEGKYKKKHLEFYHE YEERLKEVKVLDPACGSGAFLNQAFDFLLKEYQWIYEQIDRLQEGQRSIFGLESLHKD ILKNNIYGVDINESSVEITKLSLWLKTANKNQPLTNLDDNIKCGNSLIDDPEVAGEKA FDWEDEFPEIMDDGGFDVVVGNPPYVRHEQIKWMKPYLKDNYEVYNGTADLYCYFFER GIELLDEDGYFSFIVSNKFTRAKYGKELREYLLNYQIEEYIDYTDENVFRDATVDPCV IIIKKSVNQDDYLINYNKNHVVPRRSLSVNNWSFMTKKEFNLKEILEEKGDQLEKWNL DIKFGIKTGLNKAFIIDEELKNELISKDQQNEEIIKPLLRGRDIRRYKFNFNNLYLLL TGYDIDIPNEYPHIYEYLKQFKTDAKKRYDQGKNWWNLRGCDYYDDFEEEKIIYRDIS DRLMFCYDSENIYFNNTVYFINSGNKYLLAILNSKLINFYYKLISSQLGSGASRGFSI YIKKLPIPKIIQEKQKPFIDKANFMIEGKKKLNQLQQIEFISLINKYTSKSGPQLGDI VEEDGFYNKIYSGRARKVRNMTVTVNDTILTIYADKSSSGQYELMKFEVEDKYQRRYI KYYLENLTDQQLEEANDFSGGLVKRVLQIEIPDYHKYQVVRKVVNEWNDLQQEIADLE EKIEVTDREIDQMVYDLYGLSDEEIQIVEESLADNS" misc_feature 574556..576097 /locus_tag="Acear_0523" /note="type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family; Region: met_A_Alw26; TIGR02987" /db_xref="CDD:163096" misc_feature 575135..575461 /locus_tag="Acear_0523" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" misc_feature 575717..576112 /locus_tag="Acear_0523" /note="TaqI-like C-terminal specificity domain; Region: TaqI_C; pfam12950" /db_xref="CDD:193423" gene 577402..578232 /locus_tag="Acear_0524" /db_xref="GeneID:9512545" CDS 577402..578232 /locus_tag="Acear_0524" /note="KEGG: bcc:BCc_201 YoaE; SPTR: Q057M6 Putative transmembrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827135.1" /db_xref="GI:302391315" /db_xref="GeneID:9512545" /translation="MIRIFKNKSNSWKSNLGKVIILVAIIIACTSLFMEWTSPGSIQS SGDTVGDLARDARLAEEGFVAQGFQHQGVFFVSFIYLYFLIKALRDKKISKMNIILFW GGTITFGILKLMISPYFHRNADYGLGIFLFISSIIILFIGLKLYDDKFDKQKEKLSFS KLDIGRKSIIISAGIIIFLILSISLLVGAHENLTLNQIIFDLISFIMFYLASYLSIKA INKKFIDKKKSSISVLVILLALAIYLFVEDAPFLIYLIAATPFMILLFGINKVSHPYS " gene 578528..578695 /locus_tag="Acear_0525" /pseudo /db_xref="GeneID:9512546" gene 578794..580032 /locus_tag="Acear_0526" /pseudo /db_xref="GeneID:9512547" gene 580172..580402 /locus_tag="Acear_0527" /pseudo /db_xref="GeneID:9512548" gene 580594..581883 /locus_tag="Acear_0528" /db_xref="GeneID:9512549" CDS 580594..581883 /locus_tag="Acear_0528" /note="COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR004101:IPR001645; KEGG: kol:Kole_0510 FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; SPTR: C5CEI6 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase" /codon_start=1 /transl_table=11 /product="FolC bifunctional protein" /protein_id="YP_003827136.1" /db_xref="GI:302391316" /db_xref="GeneID:9512549" /translation="MKDAVEYLNKLDKFGVKPGLERIEVLLDYLDNPQNEINVIQVGG SNGKGSTSVMISSILAAAGYKVGTYNSPEIVSFYERMRINGEYMEPEALERLTKEVKP YIKKIEEQGLGHPTFFEVVTAIAFKYFAQEEVDVAVMEVGLGGRLDATNLADNIAAAV TNISREHTEYLGDTIAEIAAEKGGIVNQGGKLVTGVKNEAALDKLREISTKKEVEMID VNQEIEVERLDKDLRGQSFKAKGKQDYGKLQLDLLGRYQQQNLKVALGVIEALPTSFE VTTEDIQQGLKDLTWPGRLELLGENPLVILDGAHNPAGAKELGRVIKEDLDYEELILV LGILADKDIEQMLDILTPLADKIILTKNTNKRASDPYEVAKVLEDRGKDVEVVPKVAQ AAQQAIEIAAPADLISISGSLYTIAEARKFLVKNIIN" misc_feature 580594..581862 /locus_tag="Acear_0528" /note="Folylpolyglutamate synthase [Coenzyme metabolism]; Region: FolC; COG0285" /db_xref="CDD:30633" misc_feature 580717..581394 /locus_tag="Acear_0528" /note="Mur ligase middle domain; Region: Mur_ligase_M; pfam08245" /db_xref="CDD:191979" misc_feature 581464..581703 /locus_tag="Acear_0528" /note="Mur ligase family, glutamate ligase domain; Region: Mur_ligase_C; pfam02875" /db_xref="CDD:190458" gene 581937..582494 /locus_tag="Acear_0529" /db_xref="GeneID:9512550" CDS 581937..582494 /locus_tag="Acear_0529" /note="InterPro IPR007730; KEGG: hor:Hore_14360 sporulation domain protein; PFAM: sporulation domain protein; SPTR: B8CY16 sporulation domain protein; PFAM: sporulation related domain; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain" /codon_start=1 /transl_table=11 /product="sporulation domain protein" /protein_id="YP_003827137.1" /db_xref="GI:302391317" /db_xref="GeneID:9512550" /translation="MTKILVKEVVIMKFDRPKLKSGFSLAAMVITMSLLAAVVGYFLG NWMIQYVTAPEDGIENVSSEKVVSEEKLDTSELESNSSSALSDEAIQDQSNQNSTADS TMQSQPEVKQDSTNNLFVVQVGAFDNHDNAKGLVEKLKTKGYSAYITSQNPYKVQVGA FKKEKKARDLGEKLKQDGFPVFISH" misc_feature 582291..582485 /locus_tag="Acear_0529" /note="Sporulation related domain; Region: SPOR; cl10051" /db_xref="CDD:186898" gene 582627..582986 /locus_tag="Acear_0530" /db_xref="GeneID:9512551" CDS 582627..582986 /locus_tag="Acear_0530" /note="InterPro IPR010766; KEGG: tex:Teth514_2147 hypothetical protein; PFAM: DRTGG domain protein; SPTR: A1HP46 Putative uncharacterized protein; PFAM: DRTGG domain" /codon_start=1 /transl_table=11 /product="DRTGG domain protein" /protein_id="YP_003827138.1" /db_xref="GI:302391318" /db_xref="GeneID:9512551" /translation="MKLKDIKEAIDAEIVYGDTKLDLDIVTACGADLMSDVLTFTEEN TLLLTGLTKPQVIRTADMLNLAAIVFVRGKNPNKETIKLAQKNNIALLSTDYSLYKAC GLLYRAGLAEEEIKEEV" misc_feature 582639..582950 /locus_tag="Acear_0530" /note="DRTGG domain; Region: DRTGG; cl12147" /db_xref="CDD:196357" gene 582988..583890 /locus_tag="Acear_0531" /db_xref="GeneID:9512552" CDS 582988..583890 /locus_tag="Acear_0531" /note="COGs: COG2524 transcriptional regulator protein; InterPro IPR013785:IPR003594:IPR000644; KEGG: dtu:Dtur_0911 anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: hypothetical protein; ATP-binding region ATPase domain protein; SMART: hypothetical protein; SPTR: B8E164 Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: CBS domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /codon_start=1 /transl_table=11 /product="signal transduction protein with CBS domains" /protein_id="YP_003827139.1" /db_xref="GI:302391319" /db_xref="GeneID:9512552" /translation="MEKAGLSPEFIEELAVDLTVKDIMVDDVITLNPGHKIKNAKEIM RLRKISGIPIINDDQELVGIISIDDIVTALEEDKLDEKLIDLMSTDLITITPNVTITE ALRKFKKHQYGRLPVIDSSNRLQGIITPGDITSKLLKEVKKRELVEQGENDDGIGEKI QVEMEIEGGDFQNSGEASTRIKSLLEQMNLSPIVIRKAAVITYEAEMNVVIHAERGQV MAEVTPEEIDVVVEDEGAGIEDIDLAMQPGYSTASDHIRELGFGAGMGLANIQRWSDE LNIESEVGVGTKLEATIQLHKENI" misc_feature 583045..583386 /locus_tag="Acear_0531" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature 583066..583386 /locus_tag="Acear_0531" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair; cl10010" /db_xref="CDD:99705" misc_feature <583597..583878 /locus_tag="Acear_0531" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cl00075" /db_xref="CDD:193644" gene 583938..584294 /locus_tag="Acear_0532" /db_xref="GeneID:9512553" CDS 583938..584294 /locus_tag="Acear_0532" /note="InterPro IPR012335:IPR012336; KEGG: nth:Nther_0098 ferredoxin-like protein; SPTR: B2A3S1 ferredoxin-like protein; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit" /codon_start=1 /transl_table=11 /product="ferredoxin-like protein" /protein_id="YP_003827140.1" /db_xref="GI:302391320" /db_xref="GeneID:9512553" /translation="MKSLEELDKIRQQAKEEMKLRDNDEEIRINIPMSTCGISAGARE VLNVISEELDRQEIDNVTLNQRGCIGLCHYEPIVEVKESDQEVVTYGNITPEGARRII EEHIVNGQIIEELVIK" misc_feature 584019..584252 /locus_tag="Acear_0532" /note="Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:; Region: TRX_Fd_family; cd02980" /db_xref="CDD:48529" misc_feature order(584019..584021,584025..584027,584130..584138) /locus_tag="Acear_0532" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48529" misc_feature order(584031..584033,584046..584048,584139..584141, 584151..584153) /locus_tag="Acear_0532" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:48529" gene 584562..585890 /locus_tag="Acear_0533" /db_xref="GeneID:9512554" CDS 584562..585890 /locus_tag="Acear_0533" /note="COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; InterProIPR012285:IPR017900:IPR017896:IPR009051:IPR 010208:IPR011538:IPR019554:IPR001450; KEGG: hor:Hore_14350 electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8CY15 electron transport complex, RnfABCDGE type, C subunit; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit" /codon_start=1 /transl_table=11 /product="electron transport complex, RnfABCDGE type, C subunit" /protein_id="YP_003827141.1" /db_xref="GI:302391321" /db_xref="GeneID:9512554" /translation="MEAKTFRQGIHPSYNKDATASKSLKNAELPEEVVIPLAQHIGAP CEPVVNVGDKVKVGQKIGDSDSFVSAPVHASISGEVTDISKVATGDGEKTLAVTIASD GQDTLHESVKPKGDLDTLSPQELRDIVQEAGIVGLGGATFPSHVKVSIPEDKNVDTVI LNGAECEPYLTVDHRTMVEMSKEVVYGLKAIMKMSDAKQGYIGIEVNKPDAIEEMKKT VEDEENIEVISLEVKYPQGAERQLIDACIGREVPSGGLPLDAGVVVNNVGTAVAMTDA IKNGMPLVQRTVTVTGSGIQNPQNLVFRLGTKVEDLIEQCGGFKGEVGKVIMGGPMMG AAQHSTDIPATKGTSGILIFQEDEVEEYESSNCIRCARCVDVCPAFLMPVTLSKVAQV DMVEKLDDYNVMDCIECGSCSYVCPANIPLLHWIRLGKDKLAAEQRKNEE" misc_feature 584574..585872 /locus_tag="Acear_0533" /note="C subunit; Region: rnfC; TIGR01945" /db_xref="CDD:162617" misc_feature 584946..585338 /locus_tag="Acear_0533" /note="Respiratory-chain NADH dehydrogenase 51 Kd subunit; Region: Complex1_51K; pfam01512" /db_xref="CDD:144926" misc_feature 585420..585563 /locus_tag="Acear_0533" /note="SLBB domain; Region: SLBB; pfam10531" /db_xref="CDD:192616" misc_feature <585618..>585884 /locus_tag="Acear_0533" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" gene 585902..586828 /locus_tag="Acear_0534" /db_xref="GeneID:9512555" CDS 585902..586828 /locus_tag="Acear_0534" /note="COGs: COG4658 NADH:ubiquinone oxidoreductase subunit RnfD; InterPro IPR011303:IPR004338; KEGG: hor:Hore_14340 electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; SPTR: B8CY14 electron transport complex, RnfABCDGE type, D subunit; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit" /codon_start=1 /transl_table=11 /product="electron transport complex, RnfABCDGE type, D subunit" /protein_id="YP_003827142.1" /db_xref="GI:302391322" /db_xref="GeneID:9512555" /translation="MSNKRDLVVTSSPHVSDDDSVSKIMYNVVLALMPATILAVRTFG LHALWVILTCCVTALAGEAAVQRMRGVQVTIQDGSALVTGLLLALSLPPGLPLWMAVV GTLVAIILGKQIFGGLGYNYFNPALLGRAFLLASFPVMMTNWQKPFVDAQAQATPLNL MKMQGEATPYYDLFMGTISGSLGEVSALAVLLGGLYLLYKGYIDWRIPLSYLGTIAVF MTILGEDPVFHLLAGSVLIGAFFYATDMVTTPITKKGRWIFGVGAGILLVLIRIFGGY PEGVLYSILLMNMCVPIIDRYTVPSVFGEVTE" misc_feature 585968..586819 /locus_tag="Acear_0534" /note="RnfE family; Region: NQR2_RnfD_RnfE; cl00779" /db_xref="CDD:186185" gene 586828..587376 /locus_tag="Acear_0535" /db_xref="GeneID:9512556" CDS 586828..587376 /locus_tag="Acear_0535" /note="COGs: COG4659 NADH:ubiquinone oxidoreductase subunit RnfG; InterPro IPR010209:IPR007329; KEGG: hor:Hore_14330 electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; SPTR: B8CY13 electron transport complex, RnfABCDGE type, G subunit; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit" /codon_start=1 /transl_table=11 /product="electron transport complex, RnfABCDGE type, G subunit" /protein_id="YP_003827143.1" /db_xref="GI:302391323" /db_xref="GeneID:9512556" /translation="MAQDDPKVKMIIVLTSIMIVSAAVLTGIFVFTKPKIEAHKVQAK KEAILEVLPGSEEYKTVNKNGLELYKGYDENGNLVGTAIQTEGSGFQSVIKLMLGLDL ENDKILAVKVLSHKETPGLGARMTEPWFQDQFKEKEFSDEFKAKEDVEAIAGSTISSQ SVADIIENTIEKVESATEGGGE" misc_feature 586858..587340 /locus_tag="Acear_0535" /note="FMN-binding domain; Region: FMN_bind; cl01081" /db_xref="CDD:194030" gene 587379..587969 /locus_tag="Acear_0536" /db_xref="GeneID:9512557" CDS 587379..587969 /locus_tag="Acear_0536" /note="COGs: COG4660 NADH:ubiquinone oxidoreductase subunit RnfE; InterPro IPR010968:IPR003667; KEGG: hor:Hore_14320 electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; SPTR: B8CY12 electron transport complex, RnfABCDGE type, E subunit; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit" /codon_start=1 /transl_table=11 /product="electron transport complex, RnfABCDGE type, E subunit" /protein_id="YP_003827144.1" /db_xref="GI:302391324" /db_xref="GeneID:9512557" /translation="MAELIKDFTRGLWAENPVWVLLLGMCPTLAVTTTAVNGFAMGLA TSFVLLGGGIVNSLLRNIIPDKVRIPSYIVVIATFVTIADYVMAAYVPNIHSFLGLFI PLIVCNCLILGRSEAFAGKNPVHRSAIDALGMGVGFTWALTLLGIIREVFGFGSVFGI QIFGDWFTPWIIMVLPGGAFITLGLVLGLFNLIKSK" misc_feature 587379..587966 /locus_tag="Acear_0536" /note="Rnf-Nqr subunit, membrane protein; Region: Rnf-Nqr; cl00597" /db_xref="CDD:186097" gene 588007..588585 /locus_tag="Acear_0537" /db_xref="GeneID:9512558" CDS 588007..588585 /locus_tag="Acear_0537" /note="COGs: COG4657 NADH:ubiquinone oxidoreductase subunit RnfA; InterPro IPR011293:IPR003667; KEGG: hor:Hore_14310 electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; SPTR: B8CY11 electron transport complex, RnfABCDGE type, A subunit; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit" /codon_start=1 /transl_table=11 /product="electron transport complex, RnfABCDGE type, A subunit" /protein_id="YP_003827145.1" /db_xref="GI:302391325" /db_xref="GeneID:9512558" /translation="MELLLLFVGAAITNNFILARFLGICPFIGVSKEVPTAFSMGMAT TFVLTTSAMVVWAVQNLILVPFHLEFMQYVSFILIIASFVQLTEMAIRKISEPLYKTL GIFLPLITTNCAILGMALLIPLKGYSFIESTVFGFGAGAGFTLAMVLMAGMRENLEFA DVPEPLQGAPITLIIAGLMAIAFMGFSGMLSM" misc_feature 588007..588573 /locus_tag="Acear_0537" /note="Rnf-Nqr subunit, membrane protein; Region: Rnf-Nqr; cl00597" /db_xref="CDD:186097" gene 588646..589917 /locus_tag="Acear_0538" /db_xref="GeneID:9512559" CDS 588646..589917 /locus_tag="Acear_0538" /note="COGs: COG2878 NADH:ubiquinone oxidoreductase subunit RnfB; InterProIPR017900:IPR017896:IPR010207:IPR007202:IPR 001450; KEGG: hor:Hore_14300 electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8CY10 electron transport complex, RnfABCDGE type, B subunit; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit" /codon_start=1 /transl_table=11 /product="electron transport complex, RnfABCDGE type, B subunit" /protein_id="YP_003827146.1" /db_xref="GI:302391326" /db_xref="GeneID:9512559" /translation="MDLSLFKVSIPSMGVMGAIFAGGLAIASSKLAVEVDPRIEEIEE VLPGANCGACGEPGCSSFAEAVVNGNAEINGCPVGGSEVAGEIAEIMGVESGDSVRRI ATLLCKGGDEETFARSEYRGIESCKAADIAGGGNKSCVYGCLGFGDCEAVCSFDAIKM NENGLPEVIADECTGCGNCVEECPKGLFTLVEEGQEVFIHCSSHSGGKDVKEACKTGC IGCGVCETKCPVDAITIEDNLAVIDYEECINCGVCAEACPMDTIEAPKAKDQVSAVDE TEETDTGDDRECSIYITEECVGCGVCVEECPVDAISSEDGEIHNIDPEVCIECENCVE VCPTDAIQSKEGETEEAEKTNSNDAAEEDDHECSIYITEECVGCGVCVEECPVDAISG EDGEIHNIDPEVCIECENCVEVCPTEAIETE" misc_feature 588655..589467 /locus_tag="Acear_0538" /note="ferredoxin; Validated; Region: PRK07118" /db_xref="CDD:180852" misc_feature 588778..588882 /locus_tag="Acear_0538" /note="Putative Fe-S cluster; Region: FeS; pfam04060" /db_xref="CDD:112857" misc_feature <589153..>589332 /locus_tag="Acear_0538" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" gene 590128..590832 /locus_tag="Acear_0539" /db_xref="GeneID:9512560" CDS 590128..590832 /locus_tag="Acear_0539" /note="COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR004033; KEGG: pth:PTH_1439 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: UbiE/COQ5 methyltransferase; SPTR: A5D2A5 methylase involved in ubiquinone/menaquinone biosynthesis; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases" /codon_start=1 /transl_table=11 /product="ubiquinone/menaquinone biosynthesis methyltransferase" /protein_id="YP_003827147.1" /db_xref="GI:302391327" /db_xref="GeneID:9512560" /translation="MNKENRVYKIFQSIALKYDLMNKLMSFGLDNRWRRLVAKQAALK PGDKVLDVGGGTGRLSLELAKLLNDNGSVVCMDFSENMLQKAEKDLKDHRCYDRLEFK VDNAMDISFAANTFDAVTSAWVLRNVDDISQVLAEMKRVVKPGGRVVSLDLAKPKSEL YNSLYSFYLAKIIPVIGRLIYGQSDPYEYLYDSWKYFPNQEQLAKKFRDVGLINVDYY ELMGGVLAIHVGQMPS" misc_feature 590134..590817 /locus_tag="Acear_0539" /note="ubiE/COQ5 methyltransferase family; Region: Ubie_methyltran; pfam01209" /db_xref="CDD:110227" misc_feature 590269..590574 /locus_tag="Acear_0539" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature order(590281..590301,590356..590361,590437..590445, 590491..590493) /locus_tag="Acear_0539" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 590878..591885 /locus_tag="Acear_0540" /db_xref="GeneID:9512561" CDS 590878..591885 /locus_tag="Acear_0540" /EC_number="2.5.1.30" /note="COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR008949:IPR000092; KEGG: dae:Dtox_1248 trans-hexaprenyltranstransferase; PFAM: polyprenyl synthetase; PRIAM: trans-hexaprenyltranstransferase; SPTR: Q8GDT5 Farnesyl pyrophosphate synthetase (Fragment); PFAM: polyprenyl synthetase" /codon_start=1 /transl_table=11 /product="trans-hexaprenyltranstransferase" /protein_id="YP_003827148.1" /db_xref="GI:302391328" /db_xref="GeneID:9512561" /translation="MIKFELMPSINKDLKQVEQKLKEVTETKFSLLYRISNRLLNAGG KRLRPLLVLLSGKLNDHSAQDLISIGASVELLHMATLIHDDVIDNSLHRRSENTINQD WGNKVAVLSGDLLYTQALKLLVEHGNDEIVNYMLDIVGLICEGEAKQAVTNHDLNQDM KDYINKITKKTALLIGASCKLGAMVSQVDAKKAAAMESYGKNLGIAFQIINDLNDIVA DKEELGKEPGDDLRQGTLTLPVLYALDNSIKKEFLKKVIISRNNSQAEIKKAIGILKN SGAIKHSIEISRDYINQALDTLTLFSDSPAKNALQLITQTVINSYKGLEPLETGIKIN N" misc_feature 590890..591834 /locus_tag="Acear_0540" /note="Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]; Region: IspA; COG0142" /db_xref="CDD:30491" misc_feature 590956..591834 /locus_tag="Acear_0540" /note="Trans-Isoprenyl Diphosphate Synthases, head-to-tail; Region: Trans_IPPS_HT; cd00685" /db_xref="CDD:173833" misc_feature order(591103..591105,591112..591120,591124..591132, 591136..591141,591154..591159,591313..591315, 591322..591324,591385..591390,591397..591399, 591508..591513,591520..591522,591550..591552, 591565..591567,591580..591582) /locus_tag="Acear_0540" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:173833" misc_feature 591112..591141 /locus_tag="Acear_0540" /note="chain length determination region; other site" /db_xref="CDD:173833" misc_feature order(591127..591132,591139..591141,591154..591159, 591322..591324,591385..591387,591508..591513, 591520..591522,591550..591552,591565..591567, 591580..591582) /locus_tag="Acear_0540" /note="substrate-Mg2+ binding site; other site" /db_xref="CDD:173833" misc_feature order(591127..591132,591139..591141,591154..591159, 591385..591387,591508..591513) /locus_tag="Acear_0540" /note="catalytic residues [active]" /db_xref="CDD:173833" misc_feature order(591127..591132,591139..591141,591154..591159, 591322..591324,591385..591387) /locus_tag="Acear_0540" /note="aspartate-rich region 1; other site" /db_xref="CDD:173833" misc_feature order(591145..591189,591529..591534,591550..591567, 591574..591588) /locus_tag="Acear_0540" /note="active site lid residues [active]" /db_xref="CDD:173833" misc_feature order(591508..591513,591520..591522,591550..591552, 591565..591567,591580..591582) /locus_tag="Acear_0540" /note="aspartate-rich region 2; other site" /db_xref="CDD:173833" gene 591928..593211 /locus_tag="Acear_0541" /db_xref="GeneID:9512562" CDS 591928..593211 /locus_tag="Acear_0541" /EC_number="1.2.1.70" /note="COGs: COG0373 Glutamyl-tRNA reductase; InterProIPR016040:IPR018214:IPR015895:IPR015896:IPR 000343:IPR006151; KEGG: chy:CHY_1207 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; shikimate/quinate 5-dehydrogenase; PRIAM: Glutamyl-tRNA reductase; SPTR: Q3ACT4 Glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA reductase" /protein_id="YP_003827149.1" /db_xref="GI:302391329" /db_xref="GeneID:9512562" /translation="MTIVAMGLNHKTAPVEIREQISFTSQEKEDALNIIGNQNKISEG ILLATCNRTEVYVISSNQETGIEFILELLSQFSTLDQSELSEYLYTYSDLDAVTHLYK VASGLDSMVLGEEQILGQIKEAFELAKDQDTIDTILHHLFTEALKVGKRARSETSIND NAASVSYAAVELANKIFGSLDRKRVLILGTGEMSKLTLKNLVDHGVEDIVVANRTFSK AQNLALEFDGQAIRWKEIEDWLNQIDIVISSTAAPHYVIRYDMIEKILPNRDHKPLFF IDIAVPRDIEPEIHNLPNVYAYNIDDLESVVNANLKEREKAIKFVKRIIKQEVTAFDK WRNSRNAVPIIKSLRKQAEEIRQEELQRAFAKLDDIGEEEKNIVKSLTHKIVNKLLHN PTVQVKEFANIEESQLYLEAVSELFCLNSKENEQM" misc_feature 591928..593202 /locus_tag="Acear_0541" /note="glutamyl-tRNA reductase; Reviewed; Region: hemA; PRK00045" /db_xref="CDD:178819" misc_feature 591934..592881 /locus_tag="Acear_0541" /note="NADP-binding domain of glutamyl-tRNA reductase; Region: NAD_bind_Glutamyl_tRNA_reduct; cd05213" /db_xref="CDD:133452" misc_feature order(591982..591984,592072..592074,592273..592275, 592282..592284,592294..592296,592303..592305, 592315..592317) /locus_tag="Acear_0541" /note="tRNA; other site" /db_xref="CDD:133452" misc_feature order(592072..592077,592081..592083,592252..592254, 592267..592269,592273..592275,592285..592287) /locus_tag="Acear_0541" /note="putative tRNA binding site [nucleotide binding]; other site" /db_xref="CDD:133452" misc_feature order(592492..592494,592498..592500,592507..592509) /locus_tag="Acear_0541" /note="putative NADP binding site [chemical binding]; other site" /db_xref="CDD:133452" misc_feature 592888..593187 /locus_tag="Acear_0541" /note="Glutamyl-tRNAGlu reductase, dimerisation domain; Region: GlutR_dimer; pfam00745" /db_xref="CDD:189697" gene 593312..593977 /locus_tag="Acear_0542" /db_xref="GeneID:9512563" CDS 593312..593977 /locus_tag="Acear_0542" /EC_number="4.99.1.4" /note="COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR016040:IPR006367; KEGG: dae:Dtox_1249 siroheme synthase; PRIAM: Sirohydrochlorin ferrochelatase; SPTR: A5D3L3 Siroheme synthase; TIGRFAM: siroheme synthase; PFAM: Sirohaem synthase dimerisation region; TIGRFAM: siroheme synthase, N-terminal domain" /codon_start=1 /transl_table=11 /product="siroheme synthase" /protein_id="YP_003827150.1" /db_xref="GI:302391330" /db_xref="GeneID:9512563" /translation="MAEYYPLALDLATKEVLVVGGGAVAERKVQSLLDAEAEVTIISP GLTSKLKRQAEEGLISYEDRVYQSSDIDGKFLVIGATDDSEVNEQIAKDALACNLLVN VVDQPELSNFNVPAVIREGSLCLSISTDGKSPALSGRIRRELEEEFGPEYGEFLDLMG RLRSEVISKVDDIQERRSIFKELAYSEAIEYIKSEDYQKVEKLLDSILPEDINLKEVA NEG" misc_feature 593312..593737 /locus_tag="Acear_0542" /note="precorrin-2 dehydrogenase; Validated; Region: PRK06719" /db_xref="CDD:180668" misc_feature 593318..593935 /locus_tag="Acear_0542" /note="Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]; Region: CysG; COG1648" /db_xref="CDD:31834" gene 593967..594911 /locus_tag="Acear_0543" /db_xref="GeneID:9512564" CDS 593967..594911 /locus_tag="Acear_0543" /EC_number="2.5.1.61" /note="COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: drm:Dred_2163 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; PRIAM: Hydroxymethylbilane synthase; SPTR: A4J6H7 Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase" /codon_start=1 /transl_table=11 /product="hydroxymethylbilane synthase" /protein_id="YP_003827151.1" /db_xref="GI:302391331" /db_xref="GeneID:9512564" /translation="MKGNKVIIGTRSSDLAVGQAEIVAEMLGKAVSEYEFELEKIKTK GDKILDSPLSQVGGKGLFIKELEVSLLEEEIDLAVHSMKDMPAELPEGLAVLGFPERV DSRDALVSNGDRNLDELPTGARIGTGSLRRTSQLLNYRPDLEVVPIRGNINTRLEKLT AEELNLDAIVLAAAGLIRMGWKDKITEYLDDEVMLPAAGQGALAIEAREDDEEIKTLI NKIDDQRTRYILQAERGFLERLDGDCQVPIGALAEIEGEEITLEGMVATLDGQKHLRD QITGSVGEAEELGIELAEELIAKGAEKILQQARQETDK" misc_feature 593976..594812 /locus_tag="Acear_0543" /note="porphobilinogen deaminase; Reviewed; Region: hemC; PRK00072" /db_xref="CDD:178840" misc_feature 593982..594812 /locus_tag="Acear_0543" /note="Hydroxymethylbilane synthase (HMBS), also known as porphobilinogen deaminase (PBGD), is an intermediate enzyme in the biosynthetic pathway of tetrapyrrolic ring systems, such as heme, chlorophylls, and vitamin B12. HMBS catalyzes the conversion of...; Region: HMBS; cd00494" /db_xref="CDD:29604" misc_feature order(594003..594005,594018..594020,594210..594227, 594231..594233,594258..594263,594267..594284, 594357..594359,594363..594368,594378..594380, 594417..594419,594486..594488,594495..594500, 594546..594569,594621..594623,594642..594644, 594651..594653,594663..594668,594675..594677, 594696..594698,594711..594713,594750..594752, 594765..594767,594774..594776,594783..594785, 594789..594791) /locus_tag="Acear_0543" /note="domain interfaces; other site" /db_xref="CDD:29604" misc_feature order(594009..594011,594021..594023,594207..594209, 594213..594218,594345..594353,594357..594362, 594408..594410,594429..594431,594474..594482, 594489..594491,594498..594500,594555..594557, 594564..594569,594696..594698) /locus_tag="Acear_0543" /note="active site" /db_xref="CDD:29604" gene 594911..596416 /locus_tag="Acear_0544" /db_xref="GeneID:9512565" CDS 594911..596416 /locus_tag="Acear_0544" /EC_number="4.2.1.75" /EC_number="2.1.1.107" /note="COGs: COG0007 uroporphyrinogen-III methylase; InterProIPR014777:IPR014776:IPR003043:IPR000878:IPR 003754:IPR006366; KEGG: pth:PTH_0973 uroporphyrinogen-III methylase and uroporphyrinogen-III synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrinogen III synthase HEM4; SPTR: A5D3L6 uroporphyrinogen-III methylase and uroporphyrinogen-III synthase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase" /codon_start=1 /transl_table=11 /product="uroporphyrinogen-III C-methyltransferase ;uroporphyrinogen-III synthase" /protein_id="YP_003827152.1" /db_xref="GI:302391332" /db_xref="GeneID:9512565" /translation="MTNGKVFLVGAGPGDPKLITVKGLEAIKEADVLVYDYLASEQLL AKASDDVEKIYVGKKAGNHTYTQEEINNIIVKKTKNGKVVTRLKGGDPFIFGRGGEEA EYLQENGVKFEIVPGITSPIAVPAYAGIPLTHRDFNSSVSFVTGHEDPDKEESSLDWE KLATATGTIVFLMGVGNLAKNVAKLKEHGRDPETPAALIRWGTKPEQETVSGTLDNIV ERVEEAGLKPPAITIVGEVVELRDKLKWFDNKPLFGKRILVTRSRTQASSLSKKLYEL GGQPVECPAIKIVPPKDLEPLDQALMEADEYDWAVFTSVNGVKSVVNRLKELDRDVRA FGDAKICAIGSKTAAELENWGLKVDYVPDKYVAESILAGLDNDLTGQKFLLPRSDISR SALPEGLKDRGAEVNNVTAYRTVTGEGNEEALELIDKGEVDIITFTSSSTVRNFIKML GDRDYNKLLADVTIACIGPITAGTAEEFGLEVDIIAEEYTIDGLVEAVLNK" misc_feature 594914..595651 /locus_tag="Acear_0544" /note="Tetrapyrrole (Corrin/Porphyrin) Methylases; Region: TP_methylase; cl00304" /db_xref="CDD:197405" misc_feature 595679..596404 /locus_tag="Acear_0544" /note="Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations...; Region: HemD; cd06578" /db_xref="CDD:119440" misc_feature order(595691..595693,595850..595858,595946..595948, 596072..596074,596144..596146,596150..596152, 596222..596236) /locus_tag="Acear_0544" /note="active site" /db_xref="CDD:119440" misc_feature 595709..596398 /locus_tag="Acear_0544" /note="Uroporphyrinogen-III synthase HemD; Region: HEM4; pfam02602" /db_xref="CDD:145641" gene 596508..597485 /locus_tag="Acear_0545" /db_xref="GeneID:9512566" CDS 596508..597485 /locus_tag="Acear_0545" /EC_number="4.2.1.24" /note="COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR013785:IPR001731; KEGG: tpd:Teth39_1889 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; PRIAM: Porphobilinogen synthase; SPTR: C6Q7Q1 Porphobilinogen synthase; PFAM: Delta-aminolevulinic acid dehydratase" /codon_start=1 /transl_table=11 /product="porphobilinogen synthase" /protein_id="YP_003827153.1" /db_xref="GI:302391333" /db_xref="GeneID:9512566" /translation="MFSELIKRPRRLRNDNLRDLVRETGLSIEDLIYPLFVVNGENIK EEIPSMPGNYHWSLDLVVEEIDRLVELGIKAVILFGVPESKDERGSTAWAEDGIVQRA CRRIKEEYSDLLVITDVCLCQYTDHGHCGVLEDGRVKNDPTLELLTKVAVSHVEAGAD MVAPSDMMDGRVGAIRQALDDSGFNNTPIMAYSAKYASSFYGPFRDAAHSAPDEGDRC SYQMDPGNSREAVKEAALDIEEGADIVMVKPALSYLDIIQKIKEEFNYPVAAYNVSGE FSLVKAAAEKGWVNEQEVVLEMMLSMKRAGADLILTYFAKDIACWLKEK" misc_feature 596574..597473 /locus_tag="Acear_0545" /note="Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the...; Region: ALAD_PBGS; cd00384" /db_xref="CDD:88598" misc_feature order(596577..596579,596649..596651,596658..596660, 596925..596930,597009..597014,597099..597107, 597165..597167,597174..597176,597192..597194, 597201..597206,597258..597272,597342..597344, 597396..597398,597408..597410,597417..597419) /locus_tag="Acear_0545" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:88598" misc_feature order(596859..596861,596865..596867,596871..596873, 596895..596897,597000..597002,597090..597092, 597108..597110,597117..597122,597135..597137, 597156..597158,597168..597170,597249..597251, 597318..597320,597327..597329,597444..597446) /locus_tag="Acear_0545" /note="active site" /db_xref="CDD:88598" misc_feature order(597090..597092,597249..597251) /locus_tag="Acear_0545" /note="Schiff base residues; other site" /db_xref="CDD:88598" gene 597521..597988 /locus_tag="Acear_0546" /db_xref="GeneID:9512567" CDS 597521..597988 /locus_tag="Acear_0546" /note="COGs: COG1522 transcriptional regulators; InterPro IPR019888; KEGG: amt:Amet_0050 AsnC family transcriptional regulator; SMART: transcription regulator, AsnC-type; SPTR: A7UGV5 NirD" /codon_start=1 /transl_table=11 /product="AsnC family transcriptional regulator" /protein_id="YP_003827154.1" /db_xref="GI:302391334" /db_xref="GeneID:9512567" /translation="MDEIDKKLLNLTQHRFPITPRPYREIGKEIGIGAKEVINRLQSL KEEGYIRRIGGIFNSKKLGYVSTLAACKVKEDKYYEIAEVINQYRGVTHNYRRNHEFN LWFTLIAPSQKKLNEQLEEIHQIDGLEVLRNLPAKRFFKLGVKLDLEQDKEES" misc_feature 597521..597964 /locus_tag="Acear_0546" /note="Transcriptional regulators [Transcription]; Region: Lrp; COG1522" /db_xref="CDD:31711" misc_feature 597521..597829 /locus_tag="Acear_0546" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene 597988..598473 /locus_tag="Acear_0547" /db_xref="GeneID:9512568" CDS 597988..598473 /locus_tag="Acear_0547" /note="COGs: COG1522 transcriptional regulators; InterPro IPR019885; KEGG: nth:Nther_1130 transcriptional regulator, AsnC family; SPTR: A7UGV6 NirL" /codon_start=1 /transl_table=11 /product="AsnC family transcriptional regulator" /protein_id="YP_003827155.1" /db_xref="GI:302391335" /db_xref="GeneID:9512568" /translation="MPVQLSELDKAIIREVQEELSLEERPYQQIAERIGISEEELLER LEVLKERGQLRRMGVILYHRRLGYSANGMGAWVVPEEKREEIGGLMAGYDEISHVYER PTYPDWPYSLFSMIHCRNREQVERIAADISQKTGIEDYIILYSTEELKKVSMKYFCEE E" misc_feature 597988..598440 /locus_tag="Acear_0547" /note="Transcriptional regulators [Transcription]; Region: Lrp; COG1522" /db_xref="CDD:31711" gene 598473..599798 /locus_tag="Acear_0548" /db_xref="GeneID:9512569" CDS 598473..599798 /locus_tag="Acear_0548" /EC_number="5.4.3.8" /note="COGs: COG0001 glutamate-1-semialdehyde aminotransferase; InterPro IPR015421:IPR005814:IPR015424:IPR004639; KEGG: bbe:BBR47_18060 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: aminotransferase class-III; SPTR: C0ZAH4 glutamate-1-semialdehyde 2,1-aminomutase 2; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase" /codon_start=1 /transl_table=11 /product="glutamate-1-semialdehyde 2,1-aminomutase" /protein_id="YP_003827156.1" /db_xref="GI:302391336" /db_xref="GeneID:9512569" /translation="MIIDGGEDKIMSFSKSKELFADAKEVIPGGVNSPVRAFSAVDAE PVFIEEAKGSKLYDADGNEYIDYVGSWGPMIVGHGHPQVVETVQQEAAKGTSFGTPTK LETEMAELVVDAVPSIEKVRMVNSGTEATMSALRLARGYTGKDKIIKLTGCYHGHGDS LLIDAGSGVTTLGIPGSPGVPESIAQETIAAPYNDLEAIEEIFVEYGDNIAAVILEPV TGNMGVIEPKEGYLEGLREITDEYESLLVFDEVMTGFRVAYGGVQERYGVTPDLTCLG KIIGGGLPVGAYGGKEEIMDHIAPDGPVYQAGTLSGNPLAMAAGIETLKLLQEPGVYE ELEEKSAKLTAGFKDNLNDLDLPYCQSRVGAMFSLFFTDQKVVDYSTVQTCDTEAFSL YFRKMLEEGVYLGCSQFEAGFMSLAHTDKDIEKTIEANYNALKAVKENL" misc_feature 598509..599786 /locus_tag="Acear_0548" /note="glutamate-1-semialdehyde aminotransferase; Provisional; Region: PRK00062" /db_xref="CDD:178834" misc_feature 598527..599774 /locus_tag="Acear_0548" /note="Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase...; Region: OAT_like; cd00610" /db_xref="CDD:99735" misc_feature order(598848..598856,598932..598937,598941..598943, 599118..599120,599217..599219,599223..599228, 599301..599303) /locus_tag="Acear_0548" /note="inhibitor-cofactor binding pocket; inhibition site" /db_xref="CDD:99735" misc_feature order(598851..598856,598932..598937,599118..599120, 599217..599219,599226..599228,599301..599303) /locus_tag="Acear_0548" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 599301..599303 /locus_tag="Acear_0548" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 600030..601055 /locus_tag="Acear_0549" /db_xref="GeneID:9512570" CDS 600030..601055 /locus_tag="Acear_0549" /note="COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: cth:Cthe_0561 ApbE-like lipoprotein; PFAM: ApbE family lipoprotein; SPTR: C0GEW8 ApbE family lipoprotein; PFAM: ApbE family" /codon_start=1 /transl_table=11 /product="ApbE family lipoprotein" /protein_id="YP_003827157.1" /db_xref="GI:302391337" /db_xref="GeneID:9512570" /translation="MQQKKKIGLSLIILLILLVGTITSFKIISSPPEYETKEFLMDTM VSLTVTGNEAKEAGQAAVKAMRQTADEATRYNENSIISRINNGAGNKPVEVTDDLLVM IKTAKEYGRLTDGKFDITVAPVIDLWNFKAEDPAVPSDNKIERRLDLVNYKEININED KRTVMLAEPGMKLDLGGVAKGYIVDQAAEVLKKFDIESALINAGGNIRTIGTKPNGDK WRIGIRNPRDTSKDSEDNYSNIIGIKETNVVTSGDYERYFMEEGRRYHHILDPNTGYP ARGLASVTIVADSSFKADILSTALFILGFDEAKAYIQEDDSIEGMLITTDLNKWQSEG FKKLIVD" misc_feature 600222..600998 /locus_tag="Acear_0549" /note="ApbE family; Region: ApbE; cl00643" /db_xref="CDD:193897" gene 601069..601677 /locus_tag="Acear_0550" /db_xref="GeneID:9512571" CDS 601069..601677 /locus_tag="Acear_0550" /note="COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: amt:Amet_0989 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein; SPTR: A6TLY8 Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein" /codon_start=1 /transl_table=11 /product="molybdopterin-guanine dinucleotide biosynthesis protein A-like protein" /protein_id="YP_003827158.1" /db_xref="GI:302391338" /db_xref="GeneID:9512571" /translation="MSAIILAGGLSSRMEGANKPLMEFGDTTMIGRIVDNLKSIFSEV LIVTKNQELYQDYDAEIVLDKFEHQGPLSGIHAGLEASRTENNFIVSCDMPFLNLDLI RYMLNQSVEDILVPRVEGHLEPLHAVYSKQCLPKIEKAVRREKFKIIEFWEWDDVDVR YIEQTEVERFDPNLYTFFNINTRKDYRQALEILTKMNKEELD" misc_feature 601069..601647 /locus_tag="Acear_0550" /note="molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed; Region: mobA; PRK00317" /db_xref="CDD:178976" misc_feature 601069..601626 /locus_tag="Acear_0550" /note="MobA catalyzes the formation of molybdopterin guanine dinucleotide; Region: MobA; cd02503" /db_xref="CDD:133000" misc_feature order(601084..601092,601096..601098,601123..601125, 601207..601209,601258..601260,601276..601281, 601288..601290,601339..601341,601345..601347) /locus_tag="Acear_0550" /note="GTP binding site [chemical binding]; other site" /db_xref="CDD:133000" gene complement(601738..601971) /locus_tag="Acear_0551" /db_xref="GeneID:9512572" CDS complement(601738..601971) /locus_tag="Acear_0551" /note="KEGG: chy:CHY_0853 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827159.1" /db_xref="GI:302391339" /db_xref="GeneID:9512572" /translation="MDLKDGLEESLEDLSKKELRELLEKKQDLYDEVKEEMEFTLKNA GHHLPGNTRDNYERELQMIEQEIDKIQTALDKK" gene 602147..602641 /locus_tag="Acear_0552" /db_xref="GeneID:9512573" CDS 602147..602641 /locus_tag="Acear_0552" /note="COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; InterPro IPR004435; KEGG: sfu:Sfum_3074 molybdopterin-guanine dinucleotide biosynthesis MobB region; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; SPTR: C0GJ11 Molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB" /codon_start=1 /transl_table=11 /product="molybdopterin-guanine dinucleotide biosynthesis protein B" /protein_id="YP_003827160.1" /db_xref="GI:302391340" /db_xref="GeneID:9512573" /translation="MLPVVSIVGNSGSGKTTFLERLIPEMKARGYKVATIKHDAHNFK IDKPGKDSWQHRKAGAQTVILSSQTKMAMIKELDQEIGLDTLVQNYINNKDIDLVITE GYKTGDKPKIEIFRPAKFDQPLFAKEDSNVLTIIRNNEDVEGGFLVSQLIKAADLIEE EVLK" misc_feature 602153..602554 /locus_tag="Acear_0552" /note="Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In E. coli, the synthesis of Moco involves genes from several loci: moa...; Region: MobB; cd03116" /db_xref="CDD:48380" misc_feature order(602171..602173,602186..602194) /locus_tag="Acear_0552" /note="Walker A motif; other site" /db_xref="CDD:48380" gene 602701..603228 /locus_tag="Acear_0553" /db_xref="GeneID:9512574" CDS 602701..603228 /locus_tag="Acear_0553" /note="COGs: COG4769 membrane protein; InterPro IPR014535:IPR010898; KEGG: hor:Hore_14270 heptaprenyl diphosphate synthase component I; PFAM: Heptaprenyl diphosphate synthase component I; SPTR: B8CY07 Heptaprenyl diphosphate synthase component I; PFAM: Heptaprenyl diphosphate synthase component I" /codon_start=1 /transl_table=11 /product="Heptaprenyl diphosphate synthase component I" /protein_id="YP_003827161.1" /db_xref="GI:302391341" /db_xref="GeneID:9512574" /translation="MTEVKTYLYLALLSAIAVVLHLVETLIPMSVIIPGAKLGLANAM VLLALVLFGYQAGIKVLLLRIIISSFLLGTFMTINFYLSLAGGLLSFGIMLILHKYLG DKFSLVGISLAGAIVHNVGQIMTAYLIIDNWGIFYYLPYLLFFSLPTGIFIGLTVIYL EEHLRLNFKLNQEFN" misc_feature 602737..603180 /locus_tag="Acear_0553" /note="Heptaprenyl diphosphate synthase component I; Region: Hpre_diP_synt_I; cl01973" /db_xref="CDD:154687" gene 603280..603855 /locus_tag="Acear_0554" /db_xref="GeneID:9512575" CDS 603280..603855 /locus_tag="Acear_0554" /note="COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; InterPro IPR003697; KEGG: hor:Hore_14260 maf protein; PFAM: Maf family protein; SPTR: B8CY06 Maf protein; TIGRFAM: maf protein; PFAM: Maf-like protein; TIGRFAM: MAF protein" /codon_start=1 /transl_table=11 /product="maf protein" /protein_id="YP_003827162.1" /db_xref="GI:302391342" /db_xref="GeneID:9512575" /translation="MAKIVLASASPRRSQLLDQIGVEFIVQPSSVDESKFDGQAAINL VQQLAAAKSRDVANKLDKGLVIGADTVVVHHGQVLGKPESDDEAYAMLSKLSGSCHQV ITGLAVIDIENSTTRIDYKITEVEMREFSGQEISDYISTGEPMDKAGGYGIQERGAIF VTGIKGSYTNVVGLPVTKLVMICKDLGYQIV" misc_feature 603289..603819 /locus_tag="Acear_0554" /note="Nucleotide binding protein Maf. Maf has been implicated in inhibition of septum formation in eukaryotes, bacteria and archaea, but homologs in B.subtilis and S.cerevisiae are nonessential for cell division. Maf has been predicted to be a nucleotide- or...; Region: Maf; cd00555" /db_xref="CDD:29954" misc_feature order(603301..603303,603316..603318,603376..603378, 603433..603435,603484..603486,603520..603522) /locus_tag="Acear_0554" /note="active site" /db_xref="CDD:29954" misc_feature order(603415..603417,603622..603639) /locus_tag="Acear_0554" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29954" gene 603877..604566 /locus_tag="Acear_0555" /db_xref="GeneID:9512576" CDS 603877..604566 /locus_tag="Acear_0555" /note="COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: tte:TTE0897 DNA repair protein RadC; PFAM: DNA repair protein RadC; SPTR: Q8RBC5 DNA repair protein radC homolog; TIGRFAM: DNA repair protein RadC; PFAM: protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc" /codon_start=1 /transl_table=11 /product="DNA replication and repair protein RadC" /protein_id="YP_003827163.1" /db_xref="GI:302391343" /db_xref="GeneID:9512576" /translation="MDYNLTIKDLPKEERPREKLCKFGTKAMSTAELLALIIRTGSQS DTAIELANKLLTHTGGLKFIGDLSVEELQEVKGVGLAKAAQISATVELGRRIRLANQE TKEIITSPQDVANLLLARLSFLEKEHFVTLLLNTKNEIISIEDISIGSLSNSIVHPRE VFKPAIRRSSAAVILAHNHPSGNPEPSKEDIDITQRIKKAGKILGIEVLDHLVIGNKD YISLKEKGYFK" misc_feature 603889..604560 /locus_tag="Acear_0555" /note="hypothetical protein; Reviewed; Region: PRK00024" /db_xref="CDD:178801" misc_feature 604207..604545 /locus_tag="Acear_0555" /note="Mov34/MPN/PAD-1 family; Region: MPN_DUF2466; cd08071" /db_xref="CDD:163702" misc_feature order(604255..604257,604405..604407,604411..604413, 604435..604437,604444..604446) /locus_tag="Acear_0555" /note="MPN+ (JAMM) motif; other site" /db_xref="CDD:163702" misc_feature order(604405..604407,604411..604413,604444..604446) /locus_tag="Acear_0555" /note="Zinc-binding site [ion binding]; other site" /db_xref="CDD:163702" gene 604592..605638 /locus_tag="Acear_0556" /db_xref="GeneID:9512577" CDS 604592..605638 /locus_tag="Acear_0556" /note="COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: hor:Hore_14240 cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; SPTR: B8CY04 Cell shape determining protein, MreB/Mrl family; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family" /codon_start=1 /transl_table=11 /product="rod shape-determining protein MreB" /protein_id="YP_003827164.1" /db_xref="GI:302391344" /db_xref="GeneID:9512577" /translation="MVLDFLTAPFSRDMGIDLGTANTLVYVKGKGVLITEPSVVAIRK DSNEVLKVGEDAKDMIGRTPGNIVAIRPMKDGVIANFEITEKMLRHFITKAHKRRRLV RPRIIVCVPSGVTEVEKRAVIDAALQAGAREAYLIEEPMAAAIGAGLPVDEPTGNMVV DIGGGTTEVAVISLGGIVTKKSIRVGGDEMDEAIVNHIKSKYNLTIGERTAESVKMDI GSVYSVEEGEEEEIDIRGRDLVNGLPKTITVTSNEIIEALEEPVFNIVKAVTDTLERT PPELSADIMDRGIIMAGGGALLTGLDQLLCEETGMPVYLAEDPLHCVVEGTSKVLDEL NSLRDVLISPKRLS" misc_feature 604619..605620 /locus_tag="Acear_0556" /note="rod shape-determining protein MreB; Provisional; Region: PRK13927" /db_xref="CDD:184401" misc_feature 605066..605503 /locus_tag="Acear_0556" /note="Cell division protein FtsA; Region: FtsA; cl11496" /db_xref="CDD:196250" gene 605682..606512 /locus_tag="Acear_0557" /db_xref="GeneID:9512578" CDS 605682..606512 /locus_tag="Acear_0557" /note="COGs: COG1792 Cell shape-determining protein; InterPro IPR005223:IPR007221; KEGG: hor:Hore_14230 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: B8CY03 Rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC" /codon_start=1 /transl_table=11 /product="rod shape-determining protein MreC" /protein_id="YP_003827165.1" /db_xref="GI:302391345" /db_xref="GeneID:9512578" /translation="MGSFFRRHQKFILVLVILVLILSLANLVDSVFSDSDWGQGIVID AIASLAGGIDLINSEVSDTFNVILNYNKVKQENARLKKEVKSLEWKVHQLKEVVKENA RLRDLLSFKSRVPFEVIGAKVITKSADNWSRLITINRGRNSGLESKMLVVTYNGYLVG RVEKVTAYNAQVLLLSDPNFTISGLVAKEDSREVGIINGAISQKKELKMKRLPWNAEV KAGDQVITSGLSDTYPKGIIIGDVKEVKPDDHGLTRLAILEPFVDLNTFEEVLVITDF " misc_feature 606042..606500 /locus_tag="Acear_0557" /note="rod shape-determining protein MreC; Region: MreC; pfam04085" /db_xref="CDD:146620" gene 606530..607012 /locus_tag="Acear_0558" /db_xref="GeneID:9512579" CDS 606530..607012 /locus_tag="Acear_0558" /note="InterPro IPR007227:IPR017225; KEGG: swo:Swol_1639 hypothetical protein; SPTR: Q0AWG6 Putative uncharacterized protein; TIGRFAM: rod shape-determining protein MreD; PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD" /codon_start=1 /transl_table=11 /product="rod shape-determining protein MreD" /protein_id="YP_003827166.1" /db_xref="GI:302391346" /db_xref="GeneID:9512579" /translation="MRYLIYFLLILTALILQITIFAFNPIWGITPDLLLIVVISLALL NGYRRGAYIGFIAGLLQELFSSGLFGVNIITKLTFGYICGFFKGKVYSGNVLLPGFLV GITTFLNQSLIIFLNKNIVLESRFLMQFKKAVGPLIGYHVLLSLFIYPAIYYINQKYQ " misc_feature 606596..>606880 /locus_tag="Acear_0558" /note="rod shape-determining protein MreD; Region: MreD; cl01087" /db_xref="CDD:189144" gene 607042..608865 /locus_tag="Acear_0559" /db_xref="GeneID:9512580" CDS 607042..608865 /locus_tag="Acear_0559" /EC_number="2.4.1.129" /note="COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR012338:IPR005311:IPR017790:IPR001460; KEGG: hor:Hore_14210 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: peptidoglycan glycosyltransferase; SPTR: B8CY01 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding protein dimerisation domain; TIGRFAM: penicillin-binding protein 2" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 2" /protein_id="YP_003827167.1" /db_xref="GI:302391347" /db_xref="GeneID:9512580" /translation="MAKKDKFNQRLRYLRIIIVILFMILAGRLFFLQILSGNKYQKLA NGNRIHVREIKAPRGKIKSKDGKILVSNRLAYTVSILPDKINNELEATLEKLSRFLDM GIDELEAKVNGDVDSKSVVLKRDISQRELVILEENKSELPGVIINKIPVRDYVYDQLG SHFLGYVGEISAAQLERYQDSGYKVNDIIGKTGLELEYEEYLRGNDGKKQLEVNSLGQ KKQTLGIKQPTSGNDLILNIDSELQKIVQQHLKDGLERLQNKAKEDDEIPEPPTGGAV VALDPNTGEVLALSSAPNYDLSLFSGGISSKNWKKLNSDPQRPLLNRAISRTPPSGSI FKLVTGTAAIEELGVTADSEFYDPGYYQVADTKFKNWLTGGQGNLDFIDAIAFSNNTV FYELGHKLYKQDKNLLQEYAKEYGLGKKTGIDLPNEKDGLVPSPAWREEHFTKHINKV WLPGYTINLAIGQGNLKTTPIQLANLISAIANGGTIYSPQIVDRIVGHQNQVVKDYKP QILNELSVSDSTLEILQTGMEGVTTYGTAGSFFEDLSITVAGKTGTAQTNSNRSNHAW FAGYAPVDNPQIAIVVFIEYGSSSRNTLPIARQILEDYLVK" misc_feature 607105..608856 /locus_tag="Acear_0559" /note="penicillin-binding protein 2; Region: pbp2_mrdA; TIGR03423" /db_xref="CDD:188321" misc_feature 607201..607713 /locus_tag="Acear_0559" /note="Penicillin-binding Protein dimerisation domain; Region: PBP_dimer; pfam03717" /db_xref="CDD:190723" misc_feature 607861..608847 /locus_tag="Acear_0559" /note="Penicillin binding protein transpeptidase domain; Region: Transpeptidase; cl01039" /db_xref="CDD:154162" gene 608957..609592 /locus_tag="Acear_0560" /db_xref="GeneID:9512581" CDS 608957..609592 /locus_tag="Acear_0560" /note="COGs: COG0850 Septum formation inhibitor; InterPro IPR016098:IPR005526:IPR013033; KEGG: amt:Amet_2294 septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; SPTR: C0GEW0 Septum site-determining protein MinC; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC, C-terminal domain; TIGRFAM: septum site-determining protein MinC" /codon_start=1 /transl_table=11 /product="septum site-determining protein MinC" /protein_id="YP_003827168.1" /db_xref="GI:302391348" /db_xref="GeneID:9512581" /translation="MQDEGVNFRWDEGSLVITLDDELDFQHLIEQLKEKVIKAKGFFI NSNLRIELNNRKLNKEEKNQLVEIFNSLQGLSVIEIVSNSILDQKTEEVKEDSELPTL LLNRTLRSGQSITYEGNVVIKGDVNPGAEVTATGDILVMGIFRGIGHAGASGREESTI IAFRLQPLQLRIGNKISRAPDGEVNYSTDYADRPEIALIKDGAILIKELKN" misc_feature 608957..609589 /locus_tag="Acear_0560" /note="septum formation inhibitor; Reviewed; Region: minC; PRK00513" /db_xref="CDD:179052" misc_feature 609257..609580 /locus_tag="Acear_0560" /note="Septum formation inhibitor MinC, C-terminal domain; Region: MinC_C; pfam03775" /db_xref="CDD:146423" gene 609618..610412 /locus_tag="Acear_0561" /db_xref="GeneID:9512582" CDS 609618..610412 /locus_tag="Acear_0561" /note="COGs: COG2894 Septum formation inhibitor-activating ATPase; InterPro IPR010223:IPR002586; KEGG: hor:Hore_14190 septum site-determining protein MinD; PFAM: cobyrinic acid ac-diamide synthase; SPTR: B8CXZ9 Septum site-determining protein MinD; TIGRFAM: septum site-determining protein MinD; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD" /codon_start=1 /transl_table=11 /product="septum site-determining protein MinD" /protein_id="YP_003827169.1" /db_xref="GI:302391349" /db_xref="GeneID:9512582" /translation="MDGKAIVITSGKGGVGKTTTAANLGTGLAKLGNEVVLIDADIGL RNLDVVLGLENRIVYDIVNVVEEQCRLEQALIKDKRYDSLCLLPAAQTRDKTAVAPDQ MEELCNRLKQDFDYVLVDSPAGIEQGFKNAIAGVDEGIIVTTPEVSAIRDADRIIGML EAEGIKEPEVIINRMRMDMVKKGDMMDIDDMIEILAIKLLGVVPDDEQIVVSTNKGEP IILSGGKTKAGQAFENIVHRITGENVPLMSLDESFMDRFKRIIGLG" misc_feature 609717..610313 /locus_tag="Acear_0561" /note="Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a...; Region: MinD; cd02036" /db_xref="CDD:73299" misc_feature 609732..609740 /locus_tag="Acear_0561" /note="Switch I; other site" /db_xref="CDD:73299" misc_feature 609975..609989 /locus_tag="Acear_0561" /note="Switch II; other site" /db_xref="CDD:73299" gene 610431..610688 /locus_tag="Acear_0562" /db_xref="GeneID:9512583" CDS 610431..610688 /locus_tag="Acear_0562" /note="COGs: COG0851 Septum formation topological specificity factor; InterPro IPR005527; KEGG: drm:Dred_2542 cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; SPTR: C1TGL2 Cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE" /codon_start=1 /transl_table=11 /product="cell division topological specificity factor MinE" /protein_id="YP_003827170.1" /db_xref="GI:302391350" /db_xref="GeneID:9512583" /translation="MIESIKNFFTEEKDSKDVAKERLELVLVHDRIDISPETLEDMKG ELINVVSKYVKIEESKLEINLAQDDKMIALKANIPVKRKVE" misc_feature 610431..610676 /locus_tag="Acear_0562" /note="Septum formation topological specificity factor MinE; Region: MinE; cl00538" /db_xref="CDD:193859" gene 610801..611931 /locus_tag="Acear_0563" /db_xref="GeneID:9512584" CDS 610801..611931 /locus_tag="Acear_0563" /note="COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR018365:IPR011923:IPR001182; KEGG: hor:Hore_14170 cell cycle protein; PFAM: cell cycle protein; SPTR: B8CXZ7 Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA" /codon_start=1 /transl_table=11 /product="rod shape-determining protein RodA" /protein_id="YP_003827171.1" /db_xref="GI:302391351" /db_xref="GeneID:9512584" /translation="MRLKKLLQNLDYWIPILVIILVGIGLVVINSATGANSSIIQNRF IIKQLIAIILGILLLIISLFFDYRALRNYSNIIYIFTLLLLFLVLVLGTRISGSKSWI KLGAVSIQPAELAKLGLIISLADFLAARGEKLKELKHFLFSCLYICPILILTLAQNDL GTVLVLVAIFAGMFFTAGANLKYYFGIIGLGSLLIGGSLIAHFCFGLPIPLKKYQLMR LIIFWNPDLDPLGYGYNIIQSKIAIGSGGLLGKGLFAGTQTQLGFLPEKHTDFIFSVL GEELGFIGGIVVLVCFLLLLWRSIKVAFEAKDNFGQLLVVGVISMFLFHIFENIGMTI GIMPITGLPLPFISYGGSSLLTNILAVALIINVNIRRKKLIF" misc_feature 610990..611916 /locus_tag="Acear_0563" /note="Cell cycle protein; Region: FTSW_RODA_SPOVE; cl00511" /db_xref="CDD:189110" gene 611995..612864 /locus_tag="Acear_0564" /db_xref="GeneID:9512585" CDS 611995..612864 /locus_tag="Acear_0564" /note="InterPro IPR008915; KEGG: drm:Dred_2539 peptidase M50; PFAM: peptidase M50; SPTR: C0GEV5 peptidase M50; PFAM: peptidase family M50" /codon_start=1 /transl_table=11 /product="peptidase M50" /protein_id="YP_003827172.1" /db_xref="GI:302391352" /db_xref="GeneID:9512585" /translation="MYIIKILGVKIKLNLLFLVVILIFGYFRLLDKAVITFGSAFLHE LTHVAVAKGNGIGIDEVELLPFGGVAKYNDLLELDPKVEIKTAMAGPLCNLFLAAVMV ICLRYSFFNAGWGLFLIRTNLVIAFFNLLPALPLDGGRVFRAFKTRQLGFRQATKLTI CLSRYLAVTVGVLALIGLWFGYFNIMLLIIAFFIYTSTFKENRNNIYILMRYLNQKKQ RLKERKILRNEELVVIETTKIKKVIEKFKPKSFHTIMVVDNDLNIIATLTEEEIITAL LELGINIQIKDLI" misc_feature 612067..612606 /locus_tag="Acear_0564" /note="SpoIVFB Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50B), regulates intramembrane proteolysis (RIP), and is involved in the pro-sigmaK pathway of bacterial spore formation. SpoIVFB (sporulation protein, stage IV cell wall formation, F...; Region: S2P-M50_SpoIVFB; cd06161" /db_xref="CDD:100082" misc_feature order(612121..612126,612133..612135,612379..612381, 612403..612405) /locus_tag="Acear_0564" /note="active site" /db_xref="CDD:100082" misc_feature 612379..612390 /locus_tag="Acear_0564" /note="putative substrate binding region [chemical binding]; other site" /db_xref="CDD:100082" gene 613572..615419 /locus_tag="Acear_0565" /db_xref="GeneID:9512586" CDS 613572..615419 /locus_tag="Acear_0565" /note="COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: hor:Hore_14150 radical SAM domain protein; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B8CXZ5 radical SAM domain protein; PFAM: radical SAM superfamily" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003827173.1" /db_xref="GI:302391353" /db_xref="GeneID:9512586" /translation="MKQEEIEEKLEDILPKVSKPTRYLGNELNVVNKDLDKQQVNFLL AFPDIYEVGMSHLGIRILYHLLNEQEDIAAERVYMPWFDLEEKMQELEMPLFSLESKE PASNFDIVGFTLQYELSYSNILTMLDLAEIPLMSEDRTTEDPLVIAGGPCTVNPEPIT DFFDVIVIGEAEALLEELVTVYNRWQKTGDSREELLHQLAGISGVYVPDFYNIDYNRT EVDSFTVEYSDLSDRITKRVVSDLDESYYPSRWIVPYMDIVHDRINLEVARGCSRGCR FCQAGMTYRPVRERSQERLEELAADLIDQTGYEELGLTSLSTSDYSEIEELTEKLVKD YSELQVGLSLPSLRAEPSSVELAKKVQKVKKTGLTFAPEAGTQRLRDVINKGVTENDL MEAVQAAYDAGWQRVKLYFMIGLPTETEDDLAGIVKLAKKVAAVGKLKVKVGVSTFIP KPYTPFQWVGFNKLEDLRDKIDYLQQNLKGRGLSLDWNDPALSLLEAAFSRGDRRLNQ VLMEAWKLGAQFDGWTEHFDIDLWRQAFKESGMDLEEYVYRDFDPEDRLPWDHIEVGV SKDYLRKEYDKALSEETTEDCRFTDCSGCGVNQILDIDNCLVGGERNED" misc_feature 613602..615374 /locus_tag="Acear_0565" /note="radical SAM family uncharacterized protein; Region: rSAM_fuse_unch; TIGR03960" /db_xref="CDD:188475" misc_feature 614364..>614837 /locus_tag="Acear_0565" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature order(614382..614384,614388..614390,614394..614396, 614400..614408,614511..614513,614517..614522, 614598..614603,614682..614684,614805..614807) /locus_tag="Acear_0565" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" gene 615409..616116 /locus_tag="Acear_0566" /db_xref="GeneID:9512587" CDS 615409..616116 /locus_tag="Acear_0566" /note="COGs: COG5011 conserved hypothetical protein; InterPro IPR018768; KEGG: hor:Hore_14140 hypothetical protein; PFAM: protein of unknown function DUF2344; SPTR: B8CXZ4 Uncharacterized protein conserved in bacteria; PFAM: Uncharacterized protein conserved in bacteria (DUF2344)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827174.1" /db_xref="GI:302391354" /db_xref="GeneID:9512587" /translation="MKIRAKMAKGDEVKFISHLNLMNTLTRALRRARIPIKFSQGYTP RPAISFGSALAVGVVSKSEYIDFELETDFSVKKFKEDLNEELPPGIRILKVKEIPENT KSLMAVINAARYRIELKMEDTIDKSEAEEMLADFLSRDEIMIIRKRRNKSDREFNLRP MVFELELLDVIDKKVVVEALIQTGSSGNLRTEELVRAFQQRYPVSDDFELTQVQRLGL YVKRGKKLLTPFEAAVE" misc_feature 615412..616065 /locus_tag="Acear_0566" /note="radical SAM-linked protein; Region: sam_1_link_chp; TIGR03936" /db_xref="CDD:188451" misc_feature 615412..615978 /locus_tag="Acear_0566" /note="Uncharacterized protein conserved in bacteria (DUF2344); Region: DUF2344; cl02090" /db_xref="CDD:154738" gene 616153..617838 /locus_tag="Acear_0567" /db_xref="GeneID:9512588" CDS 616153..617838 /locus_tag="Acear_0567" /EC_number="3.1.4.-" /note="COGs: COG1530 Ribonuclease G and E; InterProIPR012340:IPR018247:IPR002792:IPR016027:IPR 004659:IPR003029:IPR019307; KEGG: dae:Dtox_3326 ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; deoxyribonuclease/rho motif-related TRAM; PRIAM: Ribonuclease E; SPTR: C0GEV2 Ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; TRAM domain; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family" /codon_start=1 /transl_table=11 /product="RNAse G" /protein_id="YP_003827175.1" /db_xref="GI:302391355" /db_xref="GeneID:9512588" /translation="MVKEILVDVDFKDTRVAIVEDNELSEIYFERENEQQVVGNIYKG IVADVLPGMQAAFVNVGLEKNVFLHVSDALALVSEEKRKNKLSIQEVVQPGQKIMVQI TKEPLGSKGARVTCDLNLPGRYLVLMITMDHIGISRRITDDQERNRLKGITQEIKPED KGLIVRTAAANKSGADLKRDFNFLIKLWEKIIHHYHNRQAPDLLHSDLNLVSRIVRDK FTKEVDRMLINDRKEFEETMELLDFISPNLKSKVQLYNRSKPIFEYYDLETAIDKTLK RKVWLDCGGYIIFDVTEALTAVDVNTGKYVGSTDLADTVLKTNKEAAKEIAKQLKLRD IGGIIIIDFIDMDNKQDQQEVLETLDEALQKDKTKTTILGLTELGLVEMTRKKEKEGV EEFLQKSCPYCEGSGRVLSEDTVALRAIRKLRNLFANRDDEEAVLLEVHPQVAARLIG LGGNSLKELEAELDRHIYVKGSKKLHIEEIDIVETGSKETIAELASPVEVGERKVLEI EETHVTNKQDGISRIEGFIIDVIEGGHLVGEQVEVEITEVYRTYAKAKVVRKV" misc_feature 616192..617415 /locus_tag="Acear_0567" /note="ribonuclease, Rne/Rng family; Region: RNaseEG; TIGR00757" /db_xref="CDD:188080" misc_feature 616246..616521 /locus_tag="Acear_0567" /note="S1_RNase_E: RNase E and RNase G, S1-like RNA-binding domain. RNase E is an essential endoribonuclease in the processing and degradation of RNA. In addition to its role in mRNA degradation, RNase E has also been implicated in the processing of rRNA, and...; Region: S1_RNase_E; cd04453" /db_xref="CDD:88419" misc_feature order(616279..616281,616429..616431,616441..616443) /locus_tag="Acear_0567" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:88419" misc_feature order(616351..616353,616462..616464,616471..616473, 616480..616485,616513..616515) /locus_tag="Acear_0567" /note="oligonucleotide binding site [chemical binding]; other site" /db_xref="CDD:88419" misc_feature 617641..617826 /locus_tag="Acear_0567" /note="TRAM domain; Region: TRAM; cl01282" /db_xref="CDD:120537" gene 617999..618310 /locus_tag="Acear_0568" /db_xref="GeneID:9512589" CDS 617999..618310 /locus_tag="Acear_0568" /note="COGs: COG0261 Ribosomal protein L21; InterPro IPR001787; KEGG: hor:Hore_14120 ribosomal protein L21; PFAM: ribosomal protein L21; SPTR: B3KL33 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L21P" /protein_id="YP_003827176.1" /db_xref="GI:302391356" /db_xref="GeneID:9512589" /translation="MYAIIETGGKQYKVEEGQIVEIEKLNTEEDEAVEFETIKAVSSE DGLQVGQPNLEDAKVTGKVVEHGKGDKIIVFKYKPKNNYRKKMGHRQPYTKVMIEDIQ A" misc_feature 617999..618307 /locus_tag="Acear_0568" /note="Ribosomal prokaryotic L21 protein; Region: Ribosomal_L21p; cl00382" /db_xref="CDD:185955" gene 618313..618645 /locus_tag="Acear_0569" /db_xref="GeneID:9512590" CDS 618313..618645 /locus_tag="Acear_0569" /note="COGs: COG2868 ribosomal protein; InterPro IPR007422; KEGG: tte:TTE0914 ribosomal protein; PFAM: protein of unknown function DUF464; SPTR: Q8RBA8 Predicted ribosomal protein; PFAM: protein of unknown function (DUF464)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827177.1" /db_xref="GI:302391357" /db_xref="GeneID:9512590" /translation="MVKVIIERNQSGQVTEFRAEGHAEYGEYGSDIVCAAVSAILQTA VFGLTEHLGLSVEVDTSGGWLQCNLEDINATKEINAVLETMVIGLEKTAQSYPDNLKI LEGGKKDD" misc_feature 618313..618618 /locus_tag="Acear_0569" /note="Protein of unknown function (DUF464); Region: DUF464; cl01080" /db_xref="CDD:194029" gene 618638..618940 /locus_tag="Acear_0570" /db_xref="GeneID:9512591" CDS 618638..618940 /locus_tag="Acear_0570" /note="COGs: COG0211 Ribosomal protein L27; InterPro IPR001684:IPR018261; KEGG: hor:Hore_14110 ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: B8CXZ1 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L27P" /protein_id="YP_003827178.1" /db_xref="GI:302391358" /db_xref="GeneID:9512591" /translation="MIKEMNLQLFAQKKAVGSSNNGRDSISKRLGVKSHDGQFIPAGS IIVRQRGTKFKPGLNVGRGGDDTLFAKEDGYVTFERKGKQTRQVSVYTEDQLEMMA" misc_feature 618665..618910 /locus_tag="Acear_0570" /note="Ribosomal L27 protein; Region: Ribosomal_L27; cl00359" /db_xref="CDD:193785" gene 619044..620336 /locus_tag="Acear_0571" /db_xref="GeneID:9512592" CDS 619044..620336 /locus_tag="Acear_0571" /note="COGs: COG0536 GTPase; InterProIPR006169:IPR006074:IPR006073:IPR015349:IPR 014100:IPR005225:IPR002917; KEGG: hor:Hore_14100 GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein; SPTR: B8CXZ0 GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; Obg family GTPase CgtA; PFAM: GTPase of unknown function; Domain of unknown function (DUF1967); GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension; small GTP-binding protein domain" /codon_start=1 /transl_table=11 /product="GTP-binding protein Obg/CgtA" /protein_id="YP_003827179.1" /db_xref="GI:302391359" /db_xref="GeneID:9512592" /translation="MFVDEVAIEVEAGSGGDGVTSFRREKFVPEGGPDGGDGGPGGDV ILTVDKGLNTLLEFREQKIYKAEDGENGQEKNKHGSGGDDLIIEVPPGTVVYDKQTDE VMADMTAEGDKLIVAEGGRGGRGNARFKSSTRQAPKFSENGEPGEKKELKLELKLLAD VGLVGFPNVGKSTLISSVSAAKPEIGNYHFTTVEPNLGVVKTGDYSSFVMADIPGLIE GAHSGVGLGDDFLRHLERTKVILHVLDVSGFEGRDPIEDFAVINEELEKFNPQLSQRP QIVAANKMDLTAAKENIDRVKEELEDQGYEVFPISAVTGQGVDELIQAVDKLVQTSEE TIESEIEDDDKEVVIKGPQPAGEEDFEIIKRNGRYIVQGEEIERKVAMVDLTNEESAY HFARRLQEMGIEDALKAHGINDGDTVKIGEIEFEYFAE" misc_feature 619044..620327 /locus_tag="Acear_0571" /note="GTPase CgtA; Reviewed; Region: obgE; PRK12297" /db_xref="CDD:183415" misc_feature 619047..619481 /locus_tag="Acear_0571" /note="GTP1/OBG; Region: GTP1_OBG; pfam01018" /db_xref="CDD:110047" misc_feature 619518..620030 /locus_tag="Acear_0571" /note="Obg subfamily. The Obg nucleotide binding protein subfamily has been implicated in stress response, chromosome partitioning, replication initiation, mycelium development, and sporulation. Obg proteins are among a large group of GTP binding proteins...; Region: Obg; cd01898" /db_xref="CDD:133298" misc_feature 619536..619559 /locus_tag="Acear_0571" /note="G1 box; other site" /db_xref="CDD:133298" misc_feature order(619545..619562,619887..619892,619896..619898, 619974..619979) /locus_tag="Acear_0571" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133298" misc_feature 619581..619628 /locus_tag="Acear_0571" /note="Switch I region; other site" /db_xref="CDD:133298" misc_feature 619617..619619 /locus_tag="Acear_0571" /note="G2 box; other site" /db_xref="CDD:133298" misc_feature 619677..619688 /locus_tag="Acear_0571" /note="G3 box; other site" /db_xref="CDD:133298" misc_feature order(619686..619709,619716..619754) /locus_tag="Acear_0571" /note="Switch II region; other site" /db_xref="CDD:133298" misc_feature 619887..619898 /locus_tag="Acear_0571" /note="G4 box; other site" /db_xref="CDD:133298" misc_feature 619974..619982 /locus_tag="Acear_0571" /note="G5 box; other site" /db_xref="CDD:133298" misc_feature 620121..620324 /locus_tag="Acear_0571" /note="Domain of unknown function (DUF1967); Region: DUF1967; cl07779" /db_xref="CDD:195605" gene 620359..620652 /locus_tag="Acear_0572" /db_xref="GeneID:9512593" CDS 620359..620652 /locus_tag="Acear_0572" /note="COGs: COG1534 RNA-binding protein containing KH domain possibly ribosomal protein; InterPro IPR001890:IPR017924; KEGG: hor:Hore_14090 conserved hypothetical protein TIGR00253; PFAM: protein of unknown function UPF0044; SPTR: B8CXY9 Putative uncharacterized protein; PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: conserved hypothetical protein TIGR00253" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827180.1" /db_xref="GI:302391360" /db_xref="GeneID:9512593" /translation="MLTGKQRSYLRKQGNQLNPVVQIGKKGITPDLLKQVEEVLEAKE LIKIRALNNSLYTAREMAEELAEECNAEIVQVIGNVCLIYRQSEEDPYYNLPG" misc_feature 620362..620613 /locus_tag="Acear_0572" /note="CRS1 / YhbY (CRM) domain; Region: CRS1_YhbY; cl00663" /db_xref="CDD:193903" gene 620671..621804 /locus_tag="Acear_0573" /db_xref="GeneID:9512594" CDS 620671..621804 /locus_tag="Acear_0573" /EC_number="2.7.2.11" /note="COGs: COG0263 glutamate 5-kinase; InterProIPR001048:IPR019797:IPR001057:IPR002478:IPR 015947:IPR005715:IPR011529; KEGG: pth:PTH_0834 gamma-glutamyl kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; PRIAM: glutamate 5-kinase; SMART: PUA domain containing protein; SPTR: A5D411 glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase" /codon_start=1 /transl_table=11 /product="glutamate 5-kinase" /protein_id="YP_003827181.1" /db_xref="GI:302391361" /db_xref="GeneID:9512594" /translation="MSIESRLRQADRIVIKIGSSTLTHSTSKLDLGRIESLIRQIVDL KNQGKEVILVTSGAISAGRGKLDLTEVANTIPEKQALAAVGQGLLMKIYEKIFSEYGS TLAQILLTKGDITERKRYLNSRNTLFKLLDYGIIPVINENDTVAVDEIKFGDNDTLSA LVASLVDADLLVILSDVEGIYTSDPREDETAQLISKIDRITSELEKIAGGAGTDRGTG GMATKIEAAKIATRAGVMMMIANGSQEYILQEIVKGVNPGTVFLPDEQKLASRKKWIA FNLAVQGKLIVDAGAAEALLNQGTSLLPCGVIEVRGGFEAGDVVDVLNKDGEEICRGI VNYSSQEVEAIQGLQSTEIIDNLGYKDYDEVIHRDNLVCLETD" misc_feature 620680..621786 /locus_tag="Acear_0573" /note="gamma-glutamyl kinase; Provisional; Region: PRK05429" /db_xref="CDD:180076" misc_feature 620704..621456 /locus_tag="Acear_0573" /note="AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine)...; Region: AAK_G5K_ProB; cd04242" /db_xref="CDD:58608" misc_feature order(620728..620730,621193..621201,621208..621213, 621319..621321,621325..621327,621337..621339) /locus_tag="Acear_0573" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:58608" misc_feature order(620803..620808,620815..620817,620905..620907, 620917..620919,620986..620988,620992..620994, 621034..621039,621055..621057,621064..621066, 621094..621096,621100..621105) /locus_tag="Acear_0573" /note="homotetrameric interface [polypeptide binding]; other site" /db_xref="CDD:58608" misc_feature 620839..620862 /locus_tag="Acear_0573" /note="putative phosphate binding site [ion binding]; other site" /db_xref="CDD:58608" misc_feature order(620842..620844,621097..621099,621130..621132) /locus_tag="Acear_0573" /note="putative allosteric binding site; other site" /db_xref="CDD:58608" misc_feature 621517..621732 /locus_tag="Acear_0573" /note="PUA domain; Region: PUA; cl00607" /db_xref="CDD:153884" gene 621819..623075 /locus_tag="Acear_0574" /db_xref="GeneID:9512595" CDS 621819..623075 /locus_tag="Acear_0574" /EC_number="1.2.1.41" /note="COGs: COG0014 Gamma-glutamyl phosphate reductase; InterProIPR016162:IPR016163:IPR016161:IPR000965:IPR 012134:IPR015590; KEGG: mta:Moth_0563 gamma-glutamyl phosphate reductase; PFAM: aldehyde Dehydrogenase; PRIAM: glutamate-5-semialdehyde dehydrogenase; SPTR: Q2RKZ6 Gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase" /codon_start=1 /transl_table=11 /product="glutamate-5-semialdehyde dehydrogenase" /protein_id="YP_003827182.1" /db_xref="GI:302391362" /db_xref="GeneID:9512595" /translation="MSIKEKVVDKAQAASQAARGLANLDTTTKNEALLAMADALEDSS DFILNENQKDMKQGRENGLNDALMDRLLLTEARLEKMANGLREVAQFDDPIGEVTGMK KRPNGLQIGKVKVPLGVIGMIYEARPNVTADATGLCLKAGNAVLLRGGSEAINSNQAV TEVIAKAAYKSGIPTGAIQLIETTDREAVQVMFELNEYLDVLIPRGGPGLINAVINNS TVPVIETGVGNCHTYIDNEADQEMAQEIVMNAKTQRPGVCNAMETLLVHSEIAEDFLP EMVTKLQEADVEIRGDETVQRLVSGVQPADEEDWSTEYLDYILAVKVIDGFEEAVDHI HQYNTKHSEAIITDNYHKARKFLNIVDAAAVYVNASTRFTDGGQFGLGSEIGISTQKL HARGPMSVNELTTTKFVGYGDGQIRE" misc_feature 621873..623057 /locus_tag="Acear_0574" /note="Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19; Region: ALDH_F18-19_ProA-GPR; cd07079" /db_xref="CDD:143398" misc_feature 621879..623039 /locus_tag="Acear_0574" /note="gamma-glutamyl phosphate reductase; Region: proA; TIGR00407" /db_xref="CDD:161862" misc_feature 622590..622592 /locus_tag="Acear_0574" /note="putative catalytic cysteine [active]" /db_xref="CDD:143398" gene 623358..624923 /locus_tag="Acear_0575" /db_xref="GeneID:9512596" CDS 623358..624923 /locus_tag="Acear_0575" /note="COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171; KEGG: dhd:Dhaf_0077 methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; SPTR: Q251W5 methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; methylene-tetrahydrofolate reductase C terminal" /codon_start=1 /transl_table=11 /product="methylenetetrahydrofolate reductase" /protein_id="YP_003827183.1" /db_xref="GI:302391363" /db_xref="GeneID:9512596" /translation="MAENSLEESITDKDDFTVTWELIPGRGARETNQEEIFTNAEKAA ESDKVDGVTITENPGGNPAISAEYLGMKVQELGIEPIVHFTCKDKNRNQIESFLYSLE REEVSNILVMTGDYPVGGYKGASKPVYDLDPTQALDLITDLNEGLEYKDPFGRSVSLK ETNFFPGAAVSPFKRLESEQMVQYYKLKKKIEKGAQFIIPQLGYDARKFHELIQFVEM NDWDVPVIGNLFVLPYGAGRAMNANRIPGCVVTDDLLEQLKKEKEAEDNGKQARLMRA AKMYAFMKGMGYAGAHIGGHGLDYEGVEFVIEKGEELAPNWRDYIHEFDFPMEDGFYY FEKDEETGLNTDQPAQRKSKPSKETAHQLIRVGHNLLFEPDGLFFGPMQSICNVSEDG LLEEPFNFMERVIKTITNECEECGDCALVDLAYLCPMSQCPKNQRNGACGGSKDGWCE VYPEEQKCLYVRVYDRLKAYEEEEKLRDNWVPPVDWDLTHNSPWRNYFLGRDHTAKEI GITSPGSEESKKA" misc_feature 623409..624251 /locus_tag="Acear_0575" /note="Methylenetetrahydrofolate reductase (MTHFR). 5,10-Methylenetetrahydrofolate is reduced to 5-methyltetrahydrofolate by methylenetetrahydrofolate reductase, a cytoplasmic, NAD(P)-dependent enzyme. 5-methyltetrahydrofolate is utilized by methionine...; Region: MTHFR; cd00537" /db_xref="CDD:29637" misc_feature order(623523..623525,623604..623606,623691..623699, 623751..623753,623763..623765,623829..623831, 623850..623852,623868..623870,623874..623876, 623904..623906,623913..623915,623922..623927, 623952..623954,623958..623960,624237..624239) /locus_tag="Acear_0575" /note="FAD binding site [chemical binding]; other site" /db_xref="CDD:29637" misc_feature 624561..624824 /locus_tag="Acear_0575" /note="Methylene-tetrahydrofolate reductase C terminal; Region: MTHFR_C; pfam12225" /db_xref="CDD:152660" gene complement(624984..625835) /locus_tag="Acear_0576" /db_xref="GeneID:9512597" CDS complement(624984..625835) /locus_tag="Acear_0576" /note="KEGG: dsy:DSY3922 hypothetical protein; SPTR: Q24QI1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827184.1" /db_xref="GI:302391364" /db_xref="GeneID:9512597" /translation="MNIDNKSSFSIFDSLCSYSPAKLKENKFYLSRLKQLIDKNPQQF FNQLFFDYYWQSDQLELMTVIKRLRLVADQIKLPILNYLIYLEQPYNSALNNFTQQKE LCQFIRKIRSTLKDLVKEEITHNQASQKTQAKIKTGLKHVNQFDTYAERRFEIADRGF NNREVIENISNYLSKAKPLADLAYFDDLYFCRKKLKPIRNQLNQRSFNKFIQKFIKNK LLTTAKKEKILNHLQNFITQSFLDQQSKRAYAVYLTLGISIPWEKHHFIKRLILNSHL ETKIKQL" gene 625962..626588 /locus_tag="Acear_0577" /db_xref="GeneID:9512598" CDS 625962..626588 /locus_tag="Acear_0577" /EC_number="2.7.7.18" /note="COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; InterPro IPR014729:IPR004821:IPR005248:IPR004820; KEGG: tte:TTE0918 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: C6P9I3 Nicotinate (Nicotinamide) nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain" /codon_start=1 /transl_table=11 /product="nicotinate-nucleotide adenylyltransferase" /protein_id="YP_003827185.1" /db_xref="GI:302391365" /db_xref="GeneID:9512598" /translation="MLDDLIEDNIDRLGIMGGTFDPIHNGHLVTAEAAAYQYELDKVV FVPSANPPHKTEQKITDAEDRYIMTILATMNNSKFGVSRLEIDRGGLSYTIDTVQTFK EMLDNVDLYFITGADAILEIFTWKKAEQLLQECKFIAATRPGYSLSKLEEGIYEEYKE KIFQLKIPGLAISSTDIRNRVKIGRPIKYQLPNTVEAYIKKRKLYKEE" misc_feature 625995..626579 /locus_tag="Acear_0577" /note="Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism]; Region: NadD; COG1057" /db_xref="CDD:31257" misc_feature 625998..626576 /locus_tag="Acear_0577" /note="Nicotinamide/nicotinate mononucleotide adenylyltransferase; Region: NMNAT; cd02165" /db_xref="CDD:185680" misc_feature order(626007..626021,626031..626033,626037..626042, 626049..626051,626112..626114,626235..626243, 626295..626297,626301..626306,626310..626315, 626334..626339,626382..626387,626475..626477) /locus_tag="Acear_0577" /note="active site" /db_xref="CDD:185680" misc_feature 626031..626042 /locus_tag="Acear_0577" /note="(T/H)XGH motif; other site" /db_xref="CDD:185680" gene 626600..627166 /locus_tag="Acear_0578" /db_xref="GeneID:9512599" CDS 626600..627166 /locus_tag="Acear_0578" /note="COGs: COG1713 HD superfamily hydrolase involved in NAD metabolism; InterPro IPR003607:IPR005249:IPR006675:IPR006674; KEGG: tte:TTE0919 HD superfamily hydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q8RBA3 Predicted HD superfamily hydrolase involved in NAD metabolism; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: conserved hypothetical protein TIGR00488; uncharacterized domain HDIG" /codon_start=1 /transl_table=11 /product="metal dependent phosphohydrolase" /protein_id="YP_003827186.1" /db_xref="GI:302391366" /db_xref="GeneID:9512599" /translation="MTEREKIRLLQEMISQKRLKHSLAVRDVAVDLAKEYGADIKKAR TAGLLHDSAKGISNDNLLQMAQEFGIVVDDVISTVPSLLHGPIGAKLVQKEFGIEDKE ILNAIKIHTLGAEEMTILEKIIFIADYIEPNRTCAGLDELRKKARVNLDSAIRIACDR TLKYHIRNEDLIHPQTLATRNAFLRKDG" misc_feature 626600..627163 /locus_tag="Acear_0578" /note="Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism]; Region: COG1713" /db_xref="CDD:31899" misc_feature 626627..627100 /locus_tag="Acear_0578" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" gene 627169..628419 /locus_tag="Acear_0579" /db_xref="GeneID:9512600" CDS 627169..628419 /locus_tag="Acear_0579" /note="COGs: COG1316 transcriptional regulator; InterPro IPR004474; KEGG: hor:Hore_13390 cell envelope-related transcriptional attenuator; PFAM: cell envelope-related transcriptional attenuator; SPTR: B8CXS0 Cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain" /codon_start=1 /transl_table=11 /product="cell envelope-related transcriptional attenuator" /protein_id="YP_003827187.1" /db_xref="GI:302391367" /db_xref="GeneID:9512600" /translation="MAKYNKYERHRLKKKQEKEKKRSKKRFIYKLIALLVLLIIIASA GVFMKGWQLDNDDNDLQSAVDTEREQINCLILGSDALDDGTTRTDVVILASFDLKSRK LGLFSLPRDTRVEIPGRDGYHKLNAAYAYGGPKLVTKTVEDLLKVPIDHYISTDFNGF REIIDTLDGVKVNVEKHLKYIDQAGGLYIDIPAGRQTLSGQKALEYIRFRHDKLGDIG RIERQHKFLEALLERVYNPKVLLKTPKLLSHIRNNVETDLPWLESLQAAPELIKLITD LDQNKVGMATLPGEPEYIDGISYWIPDQLLVDRVVDSLINTKEYIPNSKLNISILNGN GKQGAAYQLETLLSSSGYNIVQTANADTFNYVQTCIYFNPNVSDKAQELAGYLKGRLI EWEDVDTKKEVDIKIILGENSNIS" misc_feature 627328..628161 /locus_tag="Acear_0579" /note="Cell envelope-related transcriptional attenuator domain; Region: LytR_cpsA_psr; cl00581" /db_xref="CDD:193877" gene 628529..628876 /locus_tag="Acear_0580" /db_xref="GeneID:9512601" CDS 628529..628876 /locus_tag="Acear_0580" /note="COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: hor:Hore_13380 iojap-like protein; PFAM: Iojap-related protein; SPTR: B8CXR9 Iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-related protein" /codon_start=1 /transl_table=11 /product="iojap-like protein" /protein_id="YP_003827188.1" /db_xref="GI:302391368" /db_xref="GeneID:9512601" /translation="MMGTEELAELIAETADDKKALDITILNLQGISIIADYFVICSGK TDIQVQAIARGIEDKLSDNPEVELQRKEGMDDAKWVLLDYADIIVHIFHRQEREFYEL ERLWGDAERVDWQ" misc_feature 628574..628846 /locus_tag="Acear_0580" /note="Domain of unknown function DUF143; Region: DUF143; cl00519" /db_xref="CDD:193850" gene 628953..629027 /locus_tag="Acear_R0050" /db_xref="GeneID:9512602" tRNA 628953..629027 /locus_tag="Acear_R0050" /product="tRNA-Ala" /db_xref="GeneID:9512602" gene 629166..631652 /locus_tag="Acear_0581" /db_xref="GeneID:9512603" CDS 629166..631652 /locus_tag="Acear_0581" /EC_number="6.1.1.4" /note="COGs: COG0495 Leucyl-tRNA synthetase; InterProIPR014729:IPR001412:IPR002302:IPR009008:IPR 009080:IPR015413:IPR013155; KEGG: hor:Hore_13370 leucyl-tRNA synthetase; PFAM: tRNA synthetase valyl/leucyl anticodon-binding; tRNA synthetase class I (M); SPTR: B8CXR8 Leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family" /codon_start=1 /transl_table=11 /product="leucyl-tRNA synthetase" /protein_id="YP_003827189.1" /db_xref="GI:302391369" /db_xref="GeneID:9512603" /translation="MGDSYDFTNIEEKWQQYWEEEQLFETELDPDKPKHYTLEMFPYP SGNLHMGHVRVYSIGDVIARFKRMQGYNVLHPMGWDSFGLPAENAAIERDIHPNSWTW DNIANMKKQLKSLGLSYDWNREVATCHPDYYKWTQWLFLQLYKEDLAYKQESAVNWCP GCETVLANEQVVNGGCERCDTEVEEKNLAQWFFKITEYADELLEDHELLDDWPDRVKT MQQNWIGRSEGVEIKFPIDGLDEELEVFTTRPDTVYGATYMVLAPEHPLVEELTSGTE QEEEVMDFVSEMKEKDDEERTSQESEKRGVFTGGYAVNPMTEERIPILVANYVLMSYG TGAIMAVPAHDQRDFDFAKKYDLDIRVVVQPEDEEMSGDTLEEAYTDDGVIVNSGMLN GLDTDEAFDKIADYMEENNIGNKEINYRLRDWLVSRQRYWGTPIPIIYCDECGAVPVP EEELPVELPTDVEITGHGQSPLAQVDEFVNTTCPECGKAAQRETDTMDTFVDSSWYFL RYTDSGNEEEIFDSKKANYWMNVDQYVGGIEHAILHLLYARFFMKFISDLGIADAKEP FERLLAQGMVLKDGAKMSKSKGNVVDPLEIIDNYGADTARLFMLFAAPPQKDLEWDDE GVKGASRFLDRVWRVTAEYTDQIKEIDLDNLQIDNLDKSEKELYRSVHLAIKDVTEDL DNRKQFNTAISSIMELINSLYQYRDQAAEENIELIALAVKTAILLLSPFAPHITEELW SKLGQSESVHCQEWPEYKEEALKKDEITIVVQINGNVRDRVEVAPNIEEEELKELVLA QDKVQDYLTEDKELVKTIVVPKKLVNLVIQ" misc_feature 629166..631646 /locus_tag="Acear_0581" /note="leucyl-tRNA synthetase; Validated; Region: leuS; PRK00390" /db_xref="CDD:178996" misc_feature 629265..>629873 /locus_tag="Acear_0581" /note="catalytic core domain of leucyl-tRNA synthetases; Region: LeuRS_core; cd00812" /db_xref="CDD:173906" misc_feature 629310..629321 /locus_tag="Acear_0581" /note="HIGH motif; other site" /db_xref="CDD:173906" misc_feature <630645..631028 /locus_tag="Acear_0581" /note="catalytic core domain of leucyl-tRNA synthetases; Region: LeuRS_core; cd00812" /db_xref="CDD:173906" misc_feature order(630774..630776,630780..630785,630795..630797, 630882..630884,630891..630893,630912..630914, 630918..630920) /locus_tag="Acear_0581" /note="active site" /db_xref="CDD:173906" misc_feature 630909..630923 /locus_tag="Acear_0581" /note="KMSKS motif; other site" /db_xref="CDD:173906" misc_feature 631026..631394 /locus_tag="Acear_0581" /note="Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases; Region: Anticodon_Ia_Leu_BEm; cd07958" /db_xref="CDD:153412" misc_feature order(631035..631037,631044..631049,631056..631058, 631068..631070,631230..631232,631242..631244, 631251..631256,631263..631265,631272..631274, 631284..631286) /locus_tag="Acear_0581" /note="tRNA binding surface [nucleotide binding]; other site" /db_xref="CDD:153412" gene 631768..632406 /locus_tag="Acear_0582" /db_xref="GeneID:9512604" CDS 631768..632406 /locus_tag="Acear_0582" /note="COGs: COG1555 DNA uptake protein and related DNA-binding protein; InterPro IPR004509:IPR019554; KEGG: tte:TTE0926 DNA uptake protein and related DNA-binding proteins; PFAM: Soluble ligand binding domain; SPTR: Q8RB96 DNA uptake protein and related DNA-binding proteins; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein" /codon_start=1 /transl_table=11 /product="competence protein ComEA helix-hairpin-helix repeat protein" /protein_id="YP_003827190.1" /db_xref="GI:302391370" /db_xref="GeneID:9512604" /translation="MLRFTKREEMILLVIIITLVIGSGIIAVNYFTDKKSEKAFVADN TAKKSVESKEEKLEQKQQSEDKELDEILVQVGGEINQPGVYKLREGSRIFQLLDKAGG ITSKADLDQMNLVKELKDGEKIIVPKEVTTEKKTAIQGDNQKKTEQDKINLNTATKNE LQQLYRIGPALSDRIIEYRNQHGGFNKISELKEVSRIGEKIFQENKERLTVR" misc_feature 631981..>632088 /locus_tag="Acear_0582" /note="SLBB domain; Region: SLBB; pfam10531" /db_xref="CDD:192616" misc_feature 632035..632400 /locus_tag="Acear_0582" /note="comEA protein; Region: comE; TIGR01259" /db_xref="CDD:130326" gene 632403..634730 /locus_tag="Acear_0583" /db_xref="GeneID:9512605" CDS 632403..634730 /locus_tag="Acear_0583" /note="COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); InterPro IPR004797:IPR004477; KEGG: hor:Hore_12920 DNA internalization-related competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; SPTR: B8CXM3 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2" /codon_start=1 /transl_table=11 /product="DNA internalization-related competence protein ComEC/Rec2" /protein_id="YP_003827191.1" /db_xref="GI:302391371" /db_xref="GeneID:9512605" /translation="MSLGKEFKAPFLIILFSLAAGIGLGFMLDISLLILIISQIGLII GIIICWYYELELSKVLILIFILLAGLTLVQNLEYQYQNSKVVTDYAGEYIKVKGRVVE KSKAKKETKYILEPEMVIQEGKEDRLKHGKVLLKLKDEGYNYGDVLEVTGRLRLPMTN RNPGGFSYRDYLKQQGVYSLLSDRKVDRIRLIGNKGNPLIKLSLQFKSHAGKILDKTV DEPYNLLLRGLLLGEKELLPNEIMNKFEQVGLNHLLVISGFHIGLLVLILNSICRGLK LPVKLADLMAIFLIIGYIIITYGQASVVRAGTVVILYIIGRWFNRKVNIYNILSLVAV IILIYNPYYLLRPSFQLSFMVVYSIIYLTPVLQRRLFFLPSFVARVLAASIAAQLGAF PILVYHFNRISFGPIIGNILVMPVVSLIIFLGFISLLVGNLHLIFAQLLNNISYLLST FLLELVGYLMKFDFLTFKLPRPNLLVIGIYYFLFFQSRDLLAEEIIPNFQRKREKIIL GLLIILLCILVSEFSYILDDGLEAVFLDVGQGSASLLSLPSGKKVLIDGGPDKDLVAD FLYQNGVSQLELIILSHFHSDHYKGLFRVIKEFEVDRVLVPEPAVQNEIVSSFFQMLK KKGIDYREIKGGGKYDLGKVKFNFYHYPGSISDPNNNSLITRLSYNDFQILFTGDAEK KVEEYLLQKKVPVDSEVLKVGHHGSDSSSKLDFLQQVKPKLSVISVGRWNRYNLPDAG VINRLESIEAEVFETKEEGAVIIESDGEKYWLQQR" misc_feature 633120..633857 /locus_tag="Acear_0583" /note="Competence protein; Region: Competence; cl00471" /db_xref="CDD:193833" misc_feature 633987..634724 /locus_tag="Acear_0583" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" gene 634795..635727 /locus_tag="Acear_0584" /db_xref="GeneID:9512606" CDS 634795..635727 /locus_tag="Acear_0584" /note="COGs: COG4974 Site-specific recombinase XerD; InterProIPR013762:IPR011010:IPR010998:IPR004107:IPR 002104; KEGG: cce:Ccel_1654 integrase family protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: C7IIL0 Integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family" /codon_start=1 /transl_table=11 /product="integrase family protein" /protein_id="YP_003827192.1" /db_xref="GI:302391372" /db_xref="GeneID:9512606" /translation="MKLINLMEDFLQWIEVEKGYADSTIKAYEYDILLFLRWYDGGEI IQGENKEDLKIKLKRIELENVTLEELRKFVVYLAQELDYSNTTRCRKIASLKSFWNYL CKVRKLTDNIASDLSLPKKEPTTEIYLKQKEINQLFVAIDEISRNIIRDKSILAVLLY TGIRVSECINLNLSDIDLESRILRIVKGKGGKSRMIGINKELMPYIKDYLQKRQQVLI EGNPLFLSERGNRLNKRTLQYHFKRWVEEAGLPDEVTVHKCRHTFLSHLCQNGASLAE IKQISGHKNLASLQRYLHNDQKRLNKIVNKVSYK" misc_feature 634795..635712 /locus_tag="Acear_0584" /note="site-specific tyrosine recombinase XerC; Reviewed; Region: xerC; PRK00236" /db_xref="CDD:178942" misc_feature 634813..635703 /locus_tag="Acear_0584" /note="DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine recombinases that share the same fold in their catalytic domain containing six conserved active site...; Region: DNA_BRE_C; cl00213" /db_xref="CDD:193712" misc_feature order(635284..635289,635359..635361,635557..635565, 635668..635670) /locus_tag="Acear_0584" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29495" misc_feature order(635284..635286,635359..635361,635563..635565, 635572..635574,635641..635643,635668..635670) /locus_tag="Acear_0584" /note="Int/Topo IB signature motif; other site" /db_xref="CDD:29495" misc_feature order(635284..635286,635563..635565,635572..635574, 635641..635643,635668..635670) /locus_tag="Acear_0584" /note="active site" /db_xref="CDD:29495" gene complement(635733..636578) /locus_tag="Acear_0585" /db_xref="GeneID:9512607" CDS complement(635733..636578) /locus_tag="Acear_0585" /note="COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; InterPro IPR003594:IPR005467; KEGG: mta:Moth_1579 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Q2RI54 Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /codon_start=1 /transl_table=11 /product="signal transduction histidine kinase regulating citrate/malate metabolism" /protein_id="YP_003827193.1" /db_xref="GI:302391373" /db_xref="GeneID:9512607" /translation="MKWKSNLRIKYIIIILLTQSFLLLIFNIKSHITSFKLPSVLLNI ILFISICLSFLSIIMIKEAIKLINHEMKFKLQKVKLEEKEKLIESLRSQKHDFANHLQ TLYGMVQLGKNKKAQKYIKSLSKDLANLKYEQTEVTNTILDSILVPKKEKAANESLKF NYQIDEGIENIKLPLNKIFRIVSNLVDNAIDATKDFNEECRIEIKGRNGSEEYILNVF NTGPIIEDKLVGEILEAGFSSKGAKRGYGLHIVKELVKEAGGRLEIESKPDYGTEFIC YFPKD" misc_feature complement(635745..636047) /locus_tag="Acear_0585" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(635757..635759,635763..635768, 635781..635783,635787..635789,635835..635846, 635907..635912,635916..635918,635922..635924, 635928..635930,636006..636008,636015..636017, 636027..636029)) /locus_tag="Acear_0585" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(636015..636017) /locus_tag="Acear_0585" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(635838..635840,635844..635846, 635910..635912,635916..635918)) /locus_tag="Acear_0585" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(636575..637075) /locus_tag="Acear_0586" /db_xref="GeneID:9512608" CDS complement(636575..637075) /locus_tag="Acear_0586" /note="KEGG: swo:Swol_2401 signal transduction histidine kinase regulating citrate/malate metabolism; SPTR: Q0AUB4 Signal transduction histidine kinase regulating citrate/malate metabolism" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827194.1" /db_xref="GI:302391374" /db_xref="GeneID:9512608" /translation="MELSISQILFFVLPESLLMNYVGLGLINIKIPIKKHIKISLSCI CSLVILRNILKLYGIHIIILYFILTLSFKKFIEITWSSAIIASLLGYILLLLGETLVF PLIFQYFNTNIQELINNKLILNWIAFYLTKLPLLITGFMIYFYDFSFFDLESLHKIYN STGDKQ" gene complement(637138..637677) /locus_tag="Acear_0587" /db_xref="GeneID:9512609" CDS complement(637138..637677) /locus_tag="Acear_0587" /note="KEGG: swo:Swol_2401 signal transduction histidine kinase regulating citrate/malate metabolism; SPTR: Q0AUB4 Signal transduction histidine kinase regulating citrate/malate metabolism" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827195.1" /db_xref="GI:302391375" /db_xref="GeneID:9512609" /translation="MNLSTIQILLHIVPESFLLIYVSLGLINIKIKLQQHIKITIIYT CCLILLRDILNLYGLHIIFLFLSLTLLFRIFIEISWNLAIIASLLGFIILLLSELVLF PLVFQYLNTNIKTFINNDLILFSIIFYLTKLPSLIMSLMIYFFDFHLLNSEYLNDIFD FHLLNSEYLNDIFNFTNAN" gene 637957..638568 /locus_tag="Acear_0588" /db_xref="GeneID:9512610" CDS 637957..638568 /locus_tag="Acear_0588" /note="COGs: COG4512 Membrane protein ly involved in post-translational modification of the autoinducing quorum-sensing peptide; InterPro IPR006741; KEGG: aoe:Clos_0235 accessory gene regulator B; PFAM: accessory gene regulator B; SMART: accessory gene regulator B; SPTR: A8MKY1 accessory gene regulator B; PFAM: accessory gene regulator B" /codon_start=1 /transl_table=11 /product="accessory gene regulator B" /protein_id="YP_003827196.1" /db_xref="GI:302391376" /db_xref="GeneID:9512610" /translation="MSDKKGIELLSEKLVLGLFKDLSMEEKEVLSYGATILLSTLGTY LLLIFVSSLFNVTVLALTAVATSSLLRIFSGGVHASRFRNCALSGTIVFTTLGLIVSN FGSQIKNINILVCLLLITGSLIIYLYAPAEIKEKPITSQEKRARFKIYSFIVLSSLLL IYYIINLRTDYNYFVLAGLLGISWQLFTLTPIAYKLLGRNDNI" misc_feature 637984..638550 /locus_tag="Acear_0588" /note="Accessory gene regulator B; Region: AgrB; cl01873" /db_xref="CDD:186484" gene 638624..638743 /locus_tag="Acear_0589" /db_xref="GeneID:9512611" CDS 638624..638743 /locus_tag="Acear_0589" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827197.1" /db_xref="GI:302391377" /db_xref="GeneID:9512611" /translation="MKEAIAKLLKKATKANVASVSGIAYYQPEVPQAVKKEDK" gene 638811..639242 /locus_tag="Acear_0590" /db_xref="GeneID:9512612" CDS 638811..639242 /locus_tag="Acear_0590" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827198.1" /db_xref="GI:302391378" /db_xref="GeneID:9512612" /translation="MGKENDLDKIAQTVNIWCKSLIQKDEANLKSIVNPYNFRDKEIA YKNTKLIHQEDIQYTHTEYIEHVRLLWKKRKYLQTRTRDAVTYLMKEFAIYNATLQAK IKNKNDNSVIEYNDMDASFELLKIDNQWYLSGLTNIIRINN" gene 639663..640831 /locus_tag="Acear_0591" /pseudo /db_xref="GeneID:9512613" gene complement(641230..641949) /locus_tag="Acear_0592" /db_xref="GeneID:9512614" CDS complement(641230..641949) /locus_tag="Acear_0592" /note="KEGG: bld:BLi01570 hypothetical protein; SPTR: C0GEU0 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827199.1" /db_xref="GI:302391379" /db_xref="GeneID:9512614" /translation="MKKIFVLSLVAILCLSVFVGCTPSSDQAADTTEQSQADISKETG SDTDQSEPESEDINQTQTEPELEEEAQAPDETEDQTEPEDTAEKKKTNEEEKEEFDPA ELSIDEYVQHLVSSTLGDATSQGNEILLKYDYSDEELVLNLAADGNESYTVDVIQEKL FAASNKLFSKVFTDRQDIDKFTLVWYLYLVDKKDGEQGGKACTIEMSRDTFESINWDE VTRKEVPNKVDDFWIHPALTE" gene complement(642421..642717) /locus_tag="Acear_0593" /db_xref="GeneID:9512615" CDS complement(642421..642717) /locus_tag="Acear_0593" /note="InterPro IPR001448; KEGG: hor:Hore_12910 small acid-soluble spore protein alpha/beta type; PFAM: small acid-soluble spore protein alpha/beta type; SPTR: B8CXM2 Small acid-soluble spore protein alpha/beta type; PFAM: Small, acid-soluble spore proteins, alpha/beta type" /codon_start=1 /transl_table=11 /product="small acid-soluble spore protein alpha/beta type" /protein_id="YP_003827200.1" /db_xref="GI:302391380" /db_xref="GeneID:9512615" /translation="MSVRNNGNQLVNPMAMEAMDKFKQEAAQELNVSDEYKSGYWGNM TSRECGAVGGQMVKKMIEEMENQLANGANISAQTNDQEQDYNLANKAGNYQPQQ" misc_feature complement(642511..642696) /locus_tag="Acear_0593" /note="Small, acid-soluble spore proteins, alpha/beta type; Region: SASP; pfam00269" /db_xref="CDD:144014" gene complement(642818..643114) /locus_tag="Acear_0594" /db_xref="GeneID:9512616" CDS complement(642818..643114) /locus_tag="Acear_0594" /note="InterPro IPR001448; KEGG: hor:Hore_12910 small acid-soluble spore protein alpha/beta type; PFAM: small acid-soluble spore protein alpha/beta type; SPTR: B8CXM2 Small acid-soluble spore protein alpha/beta type; PFAM: Small, acid-soluble spore proteins, alpha/beta type" /codon_start=1 /transl_table=11 /product="small acid-soluble spore protein alpha/beta type" /protein_id="YP_003827201.1" /db_xref="GI:302391381" /db_xref="GeneID:9512616" /translation="MSVRNNGNQLVNPMAMEAMDKFKQEAAQELNVSDEYKSGYWGNM TSRECGAVGGQMVKKMIEEMENQLANGTNISAQTNDQEQDYNLANKAGNYQPQQ" misc_feature complement(642908..643093) /locus_tag="Acear_0594" /note="Small, acid-soluble spore proteins, alpha/beta type; Region: SASP; pfam00269" /db_xref="CDD:144014" gene 643396..644421 /locus_tag="Acear_0595" /db_xref="GeneID:9512617" CDS 643396..644421 /locus_tag="Acear_0595" /note="COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR008921:IPR005790:IPR010372; KEGG: hor:Hore_12890 DNA polymerase III subunit delta; PFAM: DNA polymerase III delta; SPTR: B8CXM0 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III subunit delta; PFAM: DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III subunit delta" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit delta" /protein_id="YP_003827202.1" /db_xref="GI:302391382" /db_xref="GeneID:9512617" /translation="MQYQDILEQDITDLDNLYLLIGDEEYLMKEFIDQFITEFVEEEF KDFNLDTINDSNDGFLTKLSNSVNQLPFMVDRRITILNGERLFTNRFNKDETEDLKEL LNDFAETSILLVKTTNQPDKRRKLYKAFKESGQILDFENLKYKALDEWIETRANELGN KIDSKAVKLLEKMFNNNLQRLDSELQKISTFLGSKEIMTFKKVRQIISKDRLLKENII FDFVDAIGEQNNEQALHLLNQMINNGQSEIGLLMMIARQVRLILQCKELYQQGKKPQQ IANRLNQHPYPIKKCIKQSKNFSISELEDILEQLLESNINLVTGEDKELELELLILKL GQIVNSN" misc_feature 643447..643965 /locus_tag="Acear_0595" /note="DNA polymerase III, delta subunit; Region: DNA_pol3_delta; pfam06144" /db_xref="CDD:148006" misc_feature 643483..644346 /locus_tag="Acear_0595" /note="DNA polymerase III, delta subunit; Region: holA; TIGR01128" /db_xref="CDD:188110" gene complement(644463..644729) /locus_tag="Acear_0596" /db_xref="GeneID:9512618" CDS complement(644463..644729) /locus_tag="Acear_0596" /note="InterPro IPR002583; KEGG: nth:Nther_1176 30S ribosomal protein S20P; PFAM: ribosomal protein S20; SPTR: B2A1L9 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S20P" /protein_id="YP_003827203.1" /db_xref="GI:302391383" /db_xref="GeneID:9512618" /translation="MPTSKSATKRVRVAKKKEERNRKVKDQLKEAIKNVEEALEAEEV ETAKEELREAKQTIDKAVTKGILHENTAARRKSKLERRVNKLIN" misc_feature complement(644472..>644558) /locus_tag="Acear_0596" /note="Ribosomal protein S20; Region: Ribosomal_S20p; cl00384" /db_xref="CDD:193796" gene 644904..645239 /locus_tag="Acear_0597" /db_xref="GeneID:9512619" CDS 644904..645239 /locus_tag="Acear_0597" /note="InterPro IPR007165; KEGG: hor:Hore_12870 hypothetical protein; PFAM: hypothetical protein; SPTR: B8CXL8 Putative uncharacterized protein; PFAM: Membrane protein of unknown function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827204.1" /db_xref="GI:302391384" /db_xref="GeneID:9512619" /translation="MQGWLGAIIRFIVSAFVLLAVSYFLPGFEIVGFANALIAAVVIA LIGYIIESILGDDVSPQSRGLVGFLTSASVIYLTQFVVGNMTVTIIGALLAALVIGIV DAVVPTELR" misc_feature 644913..645221 /locus_tag="Acear_0597" /note="Membrane protein of unknown function; Region: DUF360; cl00850" /db_xref="CDD:154038" gene 645266..646264 /locus_tag="Acear_0598" /db_xref="GeneID:9512620" CDS 645266..646264 /locus_tag="Acear_0598" /EC_number="3.4.24.78" /note="InterPro IPR005080; KEGG: hor:Hore_12860 spore protease; PFAM: peptidase M63 germination protease; PRIAM: GPR endopeptidase; SPTR: B8CXL7 spore protease; TIGRFAM: spore protease; PFAM: Germination protease; TIGRFAM: GPR endopeptidase" /codon_start=1 /transl_table=11 /product="spore protease" /protein_id="YP_003827205.1" /db_xref="GI:302391385" /db_xref="GeneID:9512620" /translation="MSKDNINPYTDLAIESRDLAVERTGGEVKGVKVDEQTIDHAKIT RIEVMNKQAAEALGKKPGHYITIHSDKLRENNRQIHEYLSGVMAAELNQLVDYNSLAK TFDQEPTILVIGLGNWNATPDALGPRVIHNLLVTRHLYDSSPEDVRDGMRPVCALAPG VLGLTGIETAEILKGVIDRVDPDLVVAVDSLVAKEAKHLNATIQISNTGIYPGSGLGK QRLGITKEDMEVPVIALGIPTVVNSVTIVNDTIDELMENRGLSNTNLQQELGQVNNQQ KQQLIKRILQPYLGDLVVTPKGIDELIRDVGRIVAGGLNVAFHPDIKKEDVSLYLQ" misc_feature 645272..646237 /locus_tag="Acear_0598" /note="Germination protease; Region: Peptidase_A25; cl04057" /db_xref="CDD:186613" gene 646350..647516 /locus_tag="Acear_0599" /db_xref="GeneID:9512621" CDS 646350..647516 /locus_tag="Acear_0599" /note="InterPro IPR010897; KEGG: hor:Hore_12850 stage II sporulation P family protein; PFAM: Stage II sporulation P family protein; SPTR: B8CXL6 Stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P" /codon_start=1 /transl_table=11 /product="stage II sporulation protein P" /protein_id="YP_003827206.1" /db_xref="GI:302391386" /db_xref="GeneID:9512621" /translation="MDLISNNLIKAIIVFLVILLGLISVNAVYNSERKPAAVSVFNPE EQSKDKLDKENLINHLLHFDIRNSKEILQKAIPILGSSQQKNSFKEVLNDPIVLINQA SDFLIGVKMDNPASILQAELPNLSVVNRNMAEREERKTEADQKETFNQKRQAQDEVQE TELNFTQTEPSQKTEKFDDNNLVGIYYTHTSESYEESVSNFHSKPGTRGDVVEVGRKL IERLESKHGINALHSTRVNDSVYRESYMESRETARQLIEDNPNLQMVFDIHRDALAKQ DKELFTTTIDGQKVAKVMIVVAKANKNYGLSHPEWRKNLRFAYRLADEINSMYPNLLR KVKVVDNRRYNQDLHPHSVLLEIGGVSNTSAEAKRSTRLMADVIASLLDDELNN" misc_feature 646674..647486 /locus_tag="Acear_0599" /note="Stage II sporulation protein P (SpoIIP); Region: SpoIIP; pfam07454" /db_xref="CDD:148833" misc_feature 646896..647495 /locus_tag="Acear_0599" /note="stage II sporulation protein P; Region: spore_II_P; TIGR02867" /db_xref="CDD:163050" gene 647599..649404 /locus_tag="Acear_0600" /db_xref="GeneID:9512622" CDS 647599..649404 /locus_tag="Acear_0600" /note="COGs: COG0481 Membrane GTPase LepA; InterProIPR000640:IPR000795:IPR009022:IPR009000:IPR 005225:IPR006297:IPR004161:IPR013842; KEGG: hor:Hore_12840 GTP-binding protein LepA; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; SPTR: A1HR05 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain" /codon_start=1 /transl_table=11 /product="GTP-binding protein LepA" /protein_id="YP_003827207.1" /db_xref="GI:302391387" /db_xref="GeneID:9512622" /translation="MSGVNQDRIINFCIIAHVDHGKSTLADRLLEYTDTIEERDMEEQ LLDTMELERERGITIKAQAVRMNYEADDGQNYILNLIDTPGHVDFNYEVSRSLEACEG ALLVIDAAQGVEAQTLANIYLALEADLEIIPVINKIDLDSARPDLVKEELIDIGIDPD EAILTSAKEGVGIGEVLDAVVERVSSPAGDIDRPLKALIFDSVYDPYQGVIAYYRVVE GSIEPGMEIEMMATEKTFEVEEVGIFTPNMESVDRLVAGEVGYVIAGIKDVKHSRVGD TITEANNPTDEPLPGYQKAKPMVYCGLYPVEGADYDLLRDALEKLQLNDAALTFEPET SEALGFGYRGGFLGLLHMEIIQERLEREYDLDLITTAPSVVYKVHKEDGEVLEIENPA KMPEPQEIDFIEEPFVEATIMLPDDYVGDGMELAQDRRGEFEDMQYLDETRVKLVYEL PLSEIILDFFDQLKSATRGYATLDYEFVGYREADLVKLNILVNKDPIDALSCIVHEDN AYEIGQSLTRKLKEFIPEQMFEVPVQAAIGNNVIARQTIRAKRKNVLQKCYGGDVSRK RKLLEKQKEGKKRMKQVGSVEIPQEAFMAILSIDE" misc_feature 647608..649401 /locus_tag="Acear_0600" /note="GTP-binding protein LepA; Provisional; Region: PRK05433" /db_xref="CDD:180078" misc_feature 647629..648159 /locus_tag="Acear_0600" /note="LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and...; Region: LepA; cd01890" /db_xref="CDD:133290" misc_feature 647644..647667 /locus_tag="Acear_0600" /note="G1 box; other site" /db_xref="CDD:133290" misc_feature order(647647..647649,647653..647655,647665..647670, 647677..647679,647686..647691,647782..647787, 647854..647859,647926..647931,648037..648039, 648049..648051) /locus_tag="Acear_0600" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:133290" misc_feature order(647653..647670,648004..648009,648013..648015, 648094..648102) /locus_tag="Acear_0600" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133290" misc_feature 647749..647784 /locus_tag="Acear_0600" /note="Switch I region; other site" /db_xref="CDD:133290" misc_feature 647770..647772 /locus_tag="Acear_0600" /note="G2 box; other site" /db_xref="CDD:133290" misc_feature 647842..647853 /locus_tag="Acear_0600" /note="G3 box; other site" /db_xref="CDD:133290" misc_feature 647848..647904 /locus_tag="Acear_0600" /note="Switch II region; other site" /db_xref="CDD:133290" misc_feature 648004..648015 /locus_tag="Acear_0600" /note="G4 box; other site" /db_xref="CDD:133290" misc_feature 648094..648102 /locus_tag="Acear_0600" /note="G5 box; other site" /db_xref="CDD:133290" misc_feature 648181..648435 /locus_tag="Acear_0600" /note="lepA_II: This subfamily represents the domain II of LepA, a GTP-binding protein localized in the cytoplasmic membrane. The N-terminal domain of LepA shares regions of homology to translation factors. In terms of interaction with the ribosome, EF-G, EF-...; Region: lepA_II; cd03699" /db_xref="CDD:58090" misc_feature 648811..649050 /locus_tag="Acear_0600" /note="lepA_C: This family represents the C-terminal region of LepA, a GTP-binding protein localized in the cytoplasmic membrane. LepA is ubiquitous in Bacteria and Eukaryota (e.g. Saccharomyces cerevisiae GUF1p), but is missing from Archaea. LepA exhibits...; Region: lepA_C; cd03709" /db_xref="CDD:58062" misc_feature 649072..649395 /locus_tag="Acear_0600" /note="GTP-binding protein LepA C-terminus; Region: LepA_C; pfam06421" /db_xref="CDD:191515" gene 649419..650555 /locus_tag="Acear_0601" /db_xref="GeneID:9512623" CDS 649419..650555 /locus_tag="Acear_0601" /EC_number="1.3.99.22" /note="COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638:IPR004559:IPR007197:IPR010723; KEGG: cth:Cthe_1325 coproporphyrinogen III oxidase, anaerobic; PFAM: HemN domain protein; radical SAM domain protein; PRIAM: Coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: A3DF28 Coproporphyrinogen III oxidase, anaerobic; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase" /codon_start=1 /transl_table=11 /product="oxygen-independent coproporphyrinogen III oxidase" /protein_id="YP_003827208.1" /db_xref="GI:302391388" /db_xref="GeneID:9512623" /translation="MEEYGLYIHFPFCIQKCYYCDFNSVAWQDDLAAEFFTALCEEIK LVAADYDYPQLKSIFLGGGTPSCFSGQTIAELLSVLEDEFRLKTELEVTIEANPGTVD QNKLEIFKEVGINRLSFGVQSFDNRILNKLGRIHTAQKAEKNYYLAREVGFANINLDL IFAIPGQKLSQWKVTLESALQLAPEHLATYNLKIEPGTKLGKDLAQGRIEPVCQDLDL EMYQLTKKLLIDNGYEHYEISNFAKPGYRSEHNQIYWQNEPYLALGPGAHFYDGEFRG NNLESIGEYINVIKDGEKPVEIEESLSREDKIIETMILGLRLKEGISTLEFEERFGES VHNIYNEELKKLNKQGLIEINSQQIALTEKGRVLANDVLAEFIL" misc_feature 649431..650552 /locus_tag="Acear_0601" /note="coproporphyrinogen III oxidase; Provisional; Region: PRK08599" /db_xref="CDD:181496" misc_feature 649437..649955 /locus_tag="Acear_0601" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" misc_feature 650172..650516 /locus_tag="Acear_0601" /note="HemN C-terminal region; Region: HemN_C; pfam06969" /db_xref="CDD:191656" gene 650718..651764 /locus_tag="Acear_0602" /db_xref="GeneID:9512624" CDS 650718..651764 /locus_tag="Acear_0602" /note="COGs: COG1420 transcriptional regulator of heat shock gene; InterPro IPR011991:IPR002571; KEGG: hor:Hore_12820 heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; SPTR: B8CXL3 Heat-inducible transcription repressor HrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA" /codon_start=1 /transl_table=11 /product="heat-inducible transcription repressor HrcA" /protein_id="YP_003827209.1" /db_xref="GI:302391389" /db_xref="GeneID:9512624" /translation="MLEMTDRKKDVLKAIINEYVMTAEPVGSRTLARRYDFGVSSATI RNEMADLEEMGYLEKPHKSAGRIPSDKGYRFYVDTLMELRDISKQQRKKIKDNYESKA KEIHDIIKQTSDMLSELTHYTSLVLTPQVQDSVFQKLKLIPLDSRHMLLILMTDIGVV QNKVVVMPGELSRSELQKISRYLNENLEGLSLSGIDKDLLNNLEKNLINQLDILVSDL GFLADDLFRVSLDEKIYLGGTTNILEQPEFNDIRKVKAVLRVLEKEELLYNILGKIYN SSEVEVIIGQENEFDEIKDCSMVTATYQLGDKAIGKIGVLGPTRMEYPNVVSKVKIVA QILSNMLDETERNK" misc_feature 650718..651740 /locus_tag="Acear_0602" /note="heat-inducible transcription repressor; Provisional; Region: hrcA; PRK00082" /db_xref="CDD:178849" misc_feature 650724..650939 /locus_tag="Acear_0602" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 651036..651698 /locus_tag="Acear_0602" /note="HrcA protein C terminal domain; Region: HrcA; pfam01628" /db_xref="CDD:145001" gene 651786..652418 /locus_tag="Acear_0603" /db_xref="GeneID:9512625" CDS 651786..652418 /locus_tag="Acear_0603" /note="COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR013805:IPR009012:IPR000740; KEGG: nth:Nther_1182 GrpE protein; PFAM: GrpE protein; SPTR: B2A1M8 protein grpE; PFAM: GrpE" /codon_start=1 /transl_table=11 /product="GrpE protein" /protein_id="YP_003827210.1" /db_xref="GI:302391390" /db_xref="GeneID:9512625" /translation="MSHNQAAKKEFDFEEEKKEKEEAELEDEAELESEEVTEDSVDEA MDEELEVSDLKEQIEDLEKELERSEQEKEEYINKLQRQRADFSNYKNRVKKEKDNLKE NATKELVSELLPILDNFERALASSAEDENLADFMEGMEMISRQLVKVLQQEGLEEIST VGEEFDPNLHEAVAKEPSEEYESGIVIEELQKGYSFNGQVLRAAMIKVAE" misc_feature 652014..652409 /locus_tag="Acear_0603" /note="GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding...; Region: GrpE; cd00446" /db_xref="CDD:73207" misc_feature order(652017..652022,652029..652031,652041..652043, 652050..652055,652095..652097,652107..652109, 652116..652118,652137..652139,652149..652151, 652200..652202,652209..652211,652242..652244) /locus_tag="Acear_0603" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73207" misc_feature order(652056..652058,652284..652286,652293..652307, 652353..652355,652380..652382,652392..652394) /locus_tag="Acear_0603" /note="hsp70 (ATPase domain) interactions [polypeptide binding]; other site" /db_xref="CDD:73207" gene 652528..654432 /locus_tag="Acear_0604" /db_xref="GeneID:9512626" CDS 652528..654432 /locus_tag="Acear_0604" /note="COGs: COG0443 Molecular chaperone; InterPro IPR018181:IPR001023:IPR012725:IPR013126; KEGG: hor:Hore_12800 chaperone protein DnaK; PFAM: Heat shock protein 70; SPTR: B8CXL1 Chaperone protein dnaK; TIGRFAM: chaperone protein DnaK; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK" /codon_start=1 /transl_table=11 /product="chaperone protein DnaK" /protein_id="YP_003827211.1" /db_xref="GI:302391391" /db_xref="GeneID:9512626" /translation="MGKKEKVIGIDLGTTNSCVAVIEGGDPTVIPNAKGNRTTPSVVG YSDKGERLVGEAAKRQAITNPDDTVASIKRHMGSDHKETLEGEEYTPQEISAMTLQKL KQDAEDYIGEEVEKAVITVPAYFSDSQRQATKDAGKIAGLEVERIINEPTAASLAYGL DDEEDQTILVYDLGGGTFDVSILELGGGVFEVVATSGNNKLGGDDFDQKIIDYLAEEF EKEHGIDLREDKMALQRLNEAAEEAKIELSGVATTNVNLPFITQDESGPKHLDIDISR SQFEKMTSDLVEKTMKPTRQALSDADLSKNEIDHVILVGGSTRIPAIREAVENELGQQ PHKGVNPDECVAVGAAIQGGVLAGEVDDLVLLDVTPLSLGIETMGGVFTKLIERNTTI PTEKSKIFSTAADNQTTVDIHVLQGEREMAKHNKTLGRFQLTGIPPAPRGVPQIEVTF EIDKNGIVHVSAKDKGSGNEQQITIESDTGLSDEEIEEMVKEAEENAEEDKRRREAVE TVTEADSLVHQVEKTIEEAGEAADDATVSQIETAKEELEDVLEDIDINNIDPDEVDVD LIEEKKENLSSQLHELTQQMYSQAQQQAGAQAGAGAAGAGAAGAQGTAGQEDDEDVVD VDFEEVDDEE" misc_feature 652537..654291 /locus_tag="Acear_0604" /note="molecular chaperone DnaK; Provisional; Region: dnaK; PRK00290" /db_xref="CDD:178963" misc_feature 652546..653520 /locus_tag="Acear_0604" /note="Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton. Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one...; Region: ACTIN; cl11528" /db_xref="CDD:187091" misc_feature order(652567..652569,653041..653043,653062..653064, 653260..653262,653473..653475) /locus_tag="Acear_0604" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28896" misc_feature order(653077..653082,653086..653088,653092..653094, 653098..653100,653425..653427,653431..653433) /locus_tag="Acear_0604" /note="profilin binding site; other site" /db_xref="CDD:28896" gene 654546..655676 /locus_tag="Acear_0605" /db_xref="GeneID:9512627" CDS 654546..655676 /locus_tag="Acear_0605" /note="COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR001623:IPR001305:IPR018253:IPR003095:IPR 008971:IPR012724:IPR002939; KEGG: hor:Hore_12790 chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: B8CXL0 Chaperone protein dnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ C terminal region; DnaJ domain; DnaJ central domain (4 repeats); TIGRFAM: chaperone protein DnaJ" /codon_start=1 /transl_table=11 /product="chaperone protein DnaJ" /protein_id="YP_003827212.1" /db_xref="GI:302391392" /db_xref="GeneID:9512627" /translation="MSKKDYYEVLGVDEDASQKEIKKAYRKMAKKYHPDVSDEPNAEE KFKEASEAYEVLSDEEKRAKYDRFGHAGVDQDQAGFGQGGFGQGDFGSFDDIFDMFFG GGGGRGRRKNARRKGADLKYNLRIDFEEAVFGTEKEITVPRTEECDNCNGTGAKSDSD VETCAKCNGSGQIKFQQKTPLGQFVQTKTCDRCNGTGKFIKDPCPACNGKGKVKRRRT VTVNVPAGVEDGSRLRMRGEGETGENGGPAGDLFVVINVRSHKLFERRGDDILCEVPI SFVQAILGDEIEVPTLDGKVKFKIPEGTQPGTSFRLQDKGVPHLKGRGRGDQHIKVKV VIPEELGEEQKELLRKFAEISGEEINPEEKGFFRKVKKALGM" misc_feature 654546..655661 /locus_tag="Acear_0605" /note="chaperone protein DnaJ; Provisional; Region: PRK10767" /db_xref="CDD:182712" misc_feature 654558..654719 /locus_tag="Acear_0605" /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of...; Region: DnaJ; cd06257" /db_xref="CDD:99751" misc_feature order(654642..654650,654672..654674,654681..654686, 654693..654698) /locus_tag="Acear_0605" /note="HSP70 interaction site [polypeptide binding]; other site" /db_xref="CDD:99751" misc_feature 654984..655166 /locus_tag="Acear_0605" /note="DnaJ central domain; Region: DnaJ_CXXCXGXG; cl14908" /db_xref="CDD:196869" misc_feature 655350..655586 /locus_tag="Acear_0605" /note="DnaJ C terminal domain; Region: DnaJ_C; pfam01556" /db_xref="CDD:190034" gene 655702..656574 /locus_tag="Acear_0606" /db_xref="GeneID:9512628" CDS 655702..656574 /locus_tag="Acear_0606" /note="COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR004498:IPR010456; KEGG: esi:Exig_0783 ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; SPTR: B1YKT1 Ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase" /codon_start=1 /transl_table=11 /product="ribosomal protein L11 methyltransferase" /protein_id="YP_003827213.1" /db_xref="GI:302391393" /db_xref="GeneID:9512628" /translation="MEAKVFTKQKALPAVSSILDDLGVDGLIKEKVKDEVSDDNLMVK FYLPVDKSLEAKLSVLKSKIKHLPDYDIDLGSGRIECESISDQDWRESWKENFKSKQV TDKLVIKPTWEDYQPKPEEKVIEIDPGMAFGTGSHVTTTMCLEAIEEYSSQYSDLLDI GTGTGILSIGAYLLGIEDITAIDIDETAVRIAKENLKLNGISQGVKVEQGNLAEEVDN SYGLVVANLLPHIILDLIPNLRQLIDQEGIFILSGITQEKKKRIKEELKEFSLKVIEV KDSGDWVTLIGERC" misc_feature 655888..656568 /locus_tag="Acear_0606" /note="ribosomal protein L11 methyltransferase; Reviewed; Region: prmA; PRK00517" /db_xref="CDD:179053" misc_feature 656164..>656379 /locus_tag="Acear_0606" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene 656579..657325 /locus_tag="Acear_0607" /db_xref="GeneID:9512629" CDS 656579..657325 /locus_tag="Acear_0607" /note="COGs: COG1385 conserved hypothetical protein; InterPro IPR015947:IPR006700; KEGG: hor:Hore_12770 conserved hypothetical protein TIGR00046; PFAM: protein of unknown function DUF558; SPTR: B8CXK8 Putative uncharacterized protein; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827214.1" /db_xref="GI:302391394" /db_xref="GeneID:9512629" /translation="MHHFFVEPDYITEGQVRITGDDVKHITKSLRLGPGDEISVADGK GRRYMVEIAETGNGLVLGNIKEEFRSKVEPEVEVTLLQGLPKSRKMDLIVEKCTELGI DKVIPAETKRSVVKLKPSKAKRRRKRWQRKAEAAAKQSKRARIPAVGQLMNLTDLSEI ATDYDLILLPWEEESTSSVKEVLGSAAAIEKVLIIIGPEGGFTAEEVETAKQLGAKSV SLGPRILRTETAGLTTLSLVLYELGDLGGQ" misc_feature 656579..657316 /locus_tag="Acear_0607" /note="RNA methyltransferase; Region: Methyltrans_RNA; cl00611" /db_xref="CDD:186105" gene 657325..658635 /locus_tag="Acear_0608" /db_xref="GeneID:9512630" CDS 657325..658635 /locus_tag="Acear_0608" /note="COGs: COG0621 2-methylthioadenine synthetase; InterProIPR013785:IPR002792:IPR013848:IPR006638:IPR 005839:IPR006467:IPR007197; KEGG: hor:Hore_12760 MiaB-like tRNA modifying enzyme; PFAM: protein of unknown function UPF0004 ; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B8CXK7 MiaB-like tRNA modifying enzyme; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family" /codon_start=1 /transl_table=11 /product="MiaB-like tRNA modifying enzyme" /protein_id="YP_003827215.1" /db_xref="GI:302391395" /db_xref="GeneID:9512630" /translation="MERVAFYTLGCKVNQYDTEAMINLFTAADYELVDFSDEADVYVI NTCTVTHQGARKSRKMVRRANRRNPQAIVAVVGCYPQVSPAEILEIDGVDLIVGTEGQ SRIVDLVEQAKRADESLNFVRDISEAEDFEEIPLDKFEERTRASLKVQDGCDNFCAYC IIPYTRGSVRSRRIEDAVAEAKRLAASGFKEIVLTGIHLGAYGKEVEEEIDLVTLLKE LIEISGLERIRLSSIEATEVTSDLIDLIATEEKLCRHLHLPLQNGSDKILAAMNRDYT VQQYADKVAEIRSNIPQIALTTDVMVGFPGETDEDFEATYQLIEELAFSDLHVFKYSK REGTAAAKFSNQVHSKLKKERSAKLRKLADDLASQYRKKFLGAELDVLIEEERDGSTD LLTGLTDNYLRVMIDDQDQYRKELIEVELNKLQEDYLIGKITKG" misc_feature 657331..657618 /locus_tag="Acear_0608" /note="Uncharacterized protein family UPF0004; Region: UPF0004; pfam00919" /db_xref="CDD:189770" misc_feature 657340..658587 /locus_tag="Acear_0608" /note="MiaB-like tRNA modifying enzyme; Region: MiaB-like-C; TIGR01579" /db_xref="CDD:162433" misc_feature 657763..658281 /locus_tag="Acear_0608" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene 658696..659040 /locus_tag="Acear_0609" /db_xref="GeneID:9512631" CDS 658696..659040 /locus_tag="Acear_0609" /note="COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR011151:IPR019808:IPR001310:IPR011146; KEGG: hor:Hore_12750 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; SPTR: B8CXK6 Histidine triad (HIT) protein; PFAM: HIT domain" /codon_start=1 /transl_table=11 /product="histidine triad (HIT) protein" /protein_id="YP_003827216.1" /db_xref="GI:302391396" /db_xref="GeneID:9512631" /translation="MSNCIFCKIANHEMDSDIVYEDEKVVAFRDLEPQAPVHILIVPK KHIATVLDLAEEDNELVGHIYQVASKIAEEEGIAEDGFRVVNNCNEAGGQTVFHLHFH LLGGRDLQWPPG" misc_feature 658702..659013 /locus_tag="Acear_0609" /note="Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a...; Region: PKCI_related; cd01276" /db_xref="CDD:29589" misc_feature order(658777..658779,658783..658788,658807..658809, 658813..658815,658954..658956,658975..658977, 658981..658983,658993..658995,658999..659001) /locus_tag="Acear_0609" /note="nucleotide binding site/active site [active]" /db_xref="CDD:29589" misc_feature order(658987..658989,658993..658995,658999..659007) /locus_tag="Acear_0609" /note="HIT family signature motif; other site" /db_xref="CDD:29589" misc_feature 658993..658995 /locus_tag="Acear_0609" /note="catalytic residue [active]" /db_xref="CDD:29589" gene 659081..659524 /locus_tag="Acear_0610" /db_xref="GeneID:9512632" CDS 659081..659524 /locus_tag="Acear_0610" /note="COGs: COG1610 conserved hypothetical protein; InterPro IPR003789:IPR019004; KEGG: hor:Hore_12740 GatB/YqeY domain protein; PFAM: protein of unknown function; SPTR: B8CXK5 GatB/Yqey domain protein; PFAM: Yqey-like protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827217.1" /db_xref="GI:302391397" /db_xref="GeneID:9512632" /translation="MSLKDELLADMKEAMKNGDKQKLSVIRMTRAAIKNVEIEESKDL SDDELIEVLAKEVKQRRESIEEYKKAGQEDTVEELKEEINILEEYLPEQLSEEELVDL VEEVIADVGAEDMSDMGKVMGAIMPKVKGRADGSKVNELVRERLQ" misc_feature 659090..659518 /locus_tag="Acear_0610" /note="GatB domain; Region: GatB_Yqey; cl11497" /db_xref="CDD:159498" gene 659605..660915 /locus_tag="Acear_0611" /db_xref="GeneID:9512633" CDS 659605..660915 /locus_tag="Acear_0611" /note="COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: dtu:Dtur_0766 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: C0GEK5 Putative uncharacterized protein; PFAM: serine dehydrogenase proteinase; NfeD-like" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827218.1" /db_xref="GI:302391398" /db_xref="GeneID:9512633" /translation="MVEYLRLNQRWMALILILVIGLLLSFSAVGEAEAKTIYEIPVEG EINLGLARFVERGIAQAENSQAEAILLTVDTFGGLVKAATMIRDDILGTELPVVAYVK NRAWSAGALITIASSDIFMDSGSSIGAAETRPQEEKIISAFRKEFQTTAEKRGRDSGI AAAMVDADIEIEGVVEEGKILTLTANEAEKLDFITGVVNSRREAIAAAGYSQAEIEKI TPNLREQLARFVSSPVVSSILLTIGFTALIIEGITLGWGGAGTVGILSLGLYFGGRLM AGSAGLGLIFLFIVGVFLLGLEVLVVPGFGITGIGGLTAVLTSLFFTFESQQTAVYVL SISLLTSVVGLIIAAKYFLESTIWKKIELGTSQTKDEGYSSHQEAKELVGKQGRAVTP LRPAGIAKITGKRRDVVSQGDFIAAGEDIEVVSVRGRRIVVKKI" misc_feature 659695..660912 /locus_tag="Acear_0611" /note="Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]; Region: NfeD; COG1030" /db_xref="CDD:31233" misc_feature 659713..660219 /locus_tag="Acear_0611" /note="Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease; Region: Clp_protease_NfeD_like; cd07021" /db_xref="CDD:132932" misc_feature order(659716..659718,660208..660210) /locus_tag="Acear_0611" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132932" misc_feature order(659923..659925,660016..660018) /locus_tag="Acear_0611" /note="active site residues [active]" /db_xref="CDD:132932" misc_feature 660529..660912 /locus_tag="Acear_0611" /note="NfeD-like C-terminal, partner-binding; Region: NfeD; cl00686" /db_xref="CDD:120037" gene 660933..661916 /locus_tag="Acear_0612" /db_xref="GeneID:9512634" CDS 660933..661916 /locus_tag="Acear_0612" /note="COGs: COG4864 conserved hypothetical protein; InterPro IPR001107; KEGG: drm:Dred_2488 hypothetical protein; PFAM: band 7 protein; SPTR: A4J7E5 Putative uncharacterized protein; PFAM: SigmaW regulon antibacterial" /codon_start=1 /transl_table=11 /product="band 7 protein" /protein_id="YP_003827219.1" /db_xref="GI:302391399" /db_xref="GeneID:9512634" /translation="MFGTLIIVILGLTGFVWLFSYVIPVGLWLSALASGVKVSIGTLI GMRFRRVPPAEIVRPMIKSHKAGVELGIDRLEAHYLAGGNVDRVVDALIAAERADIDL TFERAAAIDLAGRDVLEAVQMSVNPKVIQTPMVTAVAMDGIQVQANARVTVRANIDQL VGGAGEETILARVGEGIVTTVGSANAHTKVLENPDSISKTVLEKGLDSGTAFEILSID IADVDVGKNIGAQLQTDQAEADKEIAQAKAEERRAMAVAQEQEMKAEVQEKRAKVVEA EAEVPLAISQALREGKMGVMDYLNYQNIKADTEMRNSISGEEETVMTDDEE" misc_feature 660933..661877 /locus_tag="Acear_0612" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG4864" /db_xref="CDD:34473" misc_feature 660933..661874 /locus_tag="Acear_0612" /note="SigmaW regulon antibacterial; Region: YdfA_immunity; cl12057" /db_xref="CDD:196322" gene 661940..662476 /locus_tag="Acear_0613" /db_xref="GeneID:9512635" CDS 661940..662476 /locus_tag="Acear_0613" /note="KEGG: IPT/TIG domain containing protein; SPTR: O87306 ElpB2" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827220.1" /db_xref="GI:302391400" /db_xref="GeneID:9512635" /translation="MELLVPILIYFGYSILVAVIKKLKSEYQESDLASYTPDEMPKSE KPEANKQPINGEKSKVEERNKIEEPAIEINKKGTAQLELEEKRQELEARKAEAEKKQQ EVREKLKSKQEKTPSVAKQNNGRLNIKNLDRNMLRQGVVLAEILQPPRAKRPYQAKDS SVRGLSKGKDVSELYKDD" gene 662448..664109 /locus_tag="Acear_0614" /db_xref="GeneID:9512636" CDS 662448..664109 /locus_tag="Acear_0614" /note="COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR002645:IPR011547; KEGG: dae:Dtox_0978 sulphate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1TIU1 Sulfate permease-like transporter, MFS superfamily; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: anti-anti-sigma factor; high affinity sulphate transporter 1" /codon_start=1 /transl_table=11 /product="sulphate transporter" /protein_id="YP_003827221.1" /db_xref="GI:302391401" /db_xref="GeneID:9512636" /translation="MFQNFIKMTKGYGLTDLRDDLLAGLSVATIALPQNMAYALIVGV DPVYGLYTSIVSMIVATFVGVSNYMVVGPANMIALAIASSLAAFEGINYLQGVLLLTM MVGLIQIILGVLKLGDLVKYVSHSVIVGLTTGVALMIGIGQLGSFLGVAVESSTNIFI TVYRLGINLDQLNYYSVAIGSLAMIIIIISKQIDSRLPSYLLAVVVSMLVTYFFNLDQ ELKVINQFSSSLPSFSPVKFDLTLVRQLFISALSIAILGFIQVVSIVKSLEKETGQEV DLNREFIGQGIINTVCSFFSSFAISGSFTNSFANYEAGAKTRFSELIIALVMLLFILL LNSLVEYIPVAALAAIVIIVAYNMIDITEIVKTFRTTKYDAVVLSTTLLTTILAPRLD YAIYLGVLISTIIVLKDTSDINYSHISYEQEKSKFVDQDFEEVKNDELIVINLAGNLN FNTSENLKEELDESFQENKIFVIRTRDVESIDFTTIRELDNFIDRVQRYGGEVMICGL GDDIFDPLEESGVIDKVNRSNVFKADDYIFSSTQEAINEAEDRQN" misc_feature 662448..664094 /locus_tag="Acear_0614" /note="Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]; Region: SUL1; COG0659" /db_xref="CDD:31004" misc_feature 662778..663578 /locus_tag="Acear_0614" /note="Sulfate transporter family; Region: Sulfate_transp; cl00967" /db_xref="CDD:193990" misc_feature 663744..664040 /locus_tag="Acear_0614" /note="Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function; Region: STAS_SulP_like_sulfate_transporter; cd07042" /db_xref="CDD:132913" gene 664726..665013 /locus_tag="Acear_0615" /db_xref="GeneID:9512637" CDS 664726..665013 /locus_tag="Acear_0615" /note="InterPro IPR009877; KEGG: drm:Dred_2486 hypothetical protein; PFAM: protein of unknown function DUF1429; SPTR: A4J7E3 Putative uncharacterized protein; TIGRFAM: sporulation protein YqfC; PFAM: YabP family; TIGRFAM: sporulation protein YqfC" /codon_start=1 /transl_table=11 /product="sporulation protein YqfC" /protein_id="YP_003827222.1" /db_xref="GI:302391402" /db_xref="GeneID:9512637" /translation="MSQDREFIEELKNKFAELFEMPKDTVLDAPRISMVGNMELTLEN HRGIIEYTEDQVRIRINSGQVVISGAELIIADLTKQTVNIKGQIIDISFKF" misc_feature 664756..665004 /locus_tag="Acear_0615" /note="YabP family; Region: YabP; cl06766" /db_xref="CDD:195376" gene 665032..666276 /locus_tag="Acear_0616" /db_xref="GeneID:9512638" CDS 665032..666276 /locus_tag="Acear_0616" /note="InterPro IPR010690; KEGG: dae:Dtox_3071 sporulation protein YqfD; PFAM: stage IV sporulation YqfD; SPTR: C1THU0 sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD" /codon_start=1 /transl_table=11 /product="sporulation protein YqfD" /protein_id="YP_003827223.1" /db_xref="GI:302391403" /db_xref="GeneID:9512638" /translation="MIFRLLCLIRGYVIVQISGYGKEKLINFLMRSDFRVWNVKHKKD HFEAKLKMKDFKQIRPYVRRADCKVRIKSKHGLPYWLRKLKVRKSLLVGVVVAVMMLY LLSSFIWSVEIHGLSELSEEKIVNLLKDSGFEYGMLKHTVDIEELEKKIESHRKIAWA DIELQGTKLDVEIVEKVLVEEKDRTDKVVDVVAKKTGLIEEIIVLKGKPVVKEGELVQ AGERLISGTRKYYPQVPQQEELSTEEKEELEPKIEKMAADGIVKAKVWYRSYAEAKLV DYYQQETAEVLDSISVRYNNSEFNVYGPDKPPFAQFKIEIAVKSLPSWRNIDFPIELI RRRYIKVKDFKERLSLAEAKELAKKRALEKVLDRVSEDAEIINKKFEIISENQKVNNI VRIKALITTKEDIALQKVKTVQ" misc_feature 665053..666252 /locus_tag="Acear_0616" /note="sporulation protein YqfD; Region: spore_yqfD; TIGR02876" /db_xref="CDD:163055" misc_feature 665053..666249 /locus_tag="Acear_0616" /note="Putative stage IV sporulation protein YqfD; Region: YqfD; pfam06898" /db_xref="CDD:148491" gene 666286..667233 /locus_tag="Acear_0617" /db_xref="GeneID:9512639" CDS 666286..667233 /locus_tag="Acear_0617" /note="COGs: COG1702 phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR018111:IPR003714:IPR004087; KEGG: hor:Hore_12600 PhoH family protein; PFAM: PhoH family protein; K Homology, type 1, subgroup; SMART: KH domain protein; SPTR: B8CXJ1 PhoH family protein; PFAM: KH domain; PhoH-like protein" /codon_start=1 /transl_table=11 /product="PhoH family protein" /protein_id="YP_003827224.1" /db_xref="GI:302391404" /db_xref="GeneID:9512639" /translation="MELDQEKIVLPTNEVAKKIFGQHDQNLKLIEEEFGVDVFARGNQ VQVEGDKRDVKKVVKLFEELNKITGKNHTLDQQEMEYAIELAVEDKFDLEEVYSDVVQ VTYQGEKIKPKTLGQKIYIDAIRNHDIVFGIGPAGTGKTYLAVVMAVNALMTNQVSRI VLTRPAIEAGENLGFLPGDLQEKVDPYLRPLYDSLYDVLGTQKVTELLEQDIIEIAPL AYMRGRTLKNSFVILDEAQNTTSAQMKMFLTRLGVNSKAVINGDITQVDLPSHNASGL AEVRTTLKDIEGIEFVYLTNKDVVRHRLVKEIIDAYETP" misc_feature 666610..667224 /locus_tag="Acear_0617" /note="PhoH-like protein; Region: PhoH; cl12134" /db_xref="CDD:196351" gene 667246..669450 /locus_tag="Acear_0618" /db_xref="GeneID:9512640" CDS 667246..669450 /locus_tag="Acear_0618" /note="COGs: COG1480 membrane-associated HD superfamily hydrolase; InterProIPR011624:IPR011621:IPR006674:IPR003607:IPR 006675; KEGG: hor:Hore_12590 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase 7TM extracellular region; metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: B8CXJ0 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG" /codon_start=1 /transl_table=11 /product="7TM receptor with intracellular metal dependent phosphohydrolase" /protein_id="YP_003827225.1" /db_xref="GI:302391405" /db_xref="GeneID:9512640" /translation="MGLLDEFKDKIESDELQFTQNSTVRNWTWGIVVFLVLTLILTID FIPNQVNLEVGQVSPKDVVAPKTIEYVDKEKTEELKQKAAQSVSKVYIEKGNVINKVQ IELSNLFQVVRKYNDIIAESNKNEENKQNNDEETETSSQKLSKTKKIKQIKEEIEIDV SDQVIGRLLEVDRNTFDYIEEKTNNIVIKYVKRGIKSDVLNEIREQMKADVESLSASS QYKYVIQELVQQVIRPNLILNQEETAKRRQQARKSVKPVTKRIQKGEIIIRHGKVVTE EDIKVLTELGLRHKQINFFAIIGLTLTVATFVIMFVVYLLQHQSKAVDDEGVVALLGI LPILTLLLAKIMTFFPIDRQSYLVPVAAMSMLLTVLTNYNLAIMITVFVSFLVSLVTG GGISGAAVGVVGGLAGIYSVSKVSQRSDLVRAGFYVSGASVMMILAFELSTSPFNLLH ILEMIVWGILNGVLAAVITNGFLPYLENTFGITSAVKLLELSNPNQPLLKKLLVEAPG TYHHSVIVGNLAEAAADEVGADSLFVRVGSYYHDIGKIKRPYFFTENQLGDENPHDKL SPTLSTLIITSHVKDGIELAKKYRLPTKVIDIIKQHHGTSLISFFYQEACHDEKYDNI DEKEFRYNGPKPQTKEAALIMLADIVEAATRSKAEVQSNPDKLEALVRGLIRNKLDDG ELDESDLTLKDLDKIATTFVKVLTGIFHSRVEYPDNLAEEIKEEKNLNGGSD" misc_feature 667384..669396 /locus_tag="Acear_0618" /note="Predicted membrane-associated HD superfamily hydrolase [General function prediction only]; Region: COG1480" /db_xref="CDD:31669" misc_feature 668125..668697 /locus_tag="Acear_0618" /note="7TM receptor with intracellular HD hydrolase; Region: 7TM-7TMR_HD; pfam07698" /db_xref="CDD:148997" misc_feature 668764..669228 /locus_tag="Acear_0618" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature order(668779..668781,668866..668871,669187..669189) /locus_tag="Acear_0618" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature 668869..668871 /locus_tag="Acear_0618" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene 669434..669859 /locus_tag="Acear_0619" /db_xref="GeneID:9512641" CDS 669434..669859 /locus_tag="Acear_0619" /note="COGs: COG0319 metal-dependent hydrolase; InterPro IPR020549:IPR002036; KEGG: hor:Hore_12580 conserved hypothetical protein TIGR00043; PFAM: protein of unknown function UPF0054; SPTR: B8CXI9 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: conserved hypothetical protein TIGR00043" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827226.1" /db_xref="GI:302391406" /db_xref="GeneID:9512641" /translation="MEVQINNLQDKIEINDGVRELITEVVREVEKSEGVKAREVSIAL VDNEYIKELNAEYRGLDEPTDVLSFPLGEEMLGDIIISLERAESQAEEYNHSLDREMG FLTVHGMLHLLGYDHKEEEAKEEMRNREEKVLNKLDLER" misc_feature 669437..669856 /locus_tag="Acear_0619" /note="Uncharacterized protein family UPF0054; Region: UPF0054; cl00402" /db_xref="CDD:185971" gene 669889..671175 /locus_tag="Acear_0620" /db_xref="GeneID:9512642" CDS 669889..671175 /locus_tag="Acear_0620" /note="COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170; KEGG: hor:Hore_12560 membrane CBS domain protein; PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; SMART: hypothetical protein; SPTR: B8CXI7 Putative membrane CBS domain protein; PFAM: CBS domain; Domain of unknown function DUF21; transporter associated domain; TIGRFAM: gliding motility-associated protein GldE" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827227.1" /db_xref="GI:302391407" /db_xref="GeneID:9512642" /translation="MGNLTSILELVMLGFLFILSGFFSGSETALMSVNRVKIRHLAQE DDSKAKIVDKLLGQPNKLLTTILVGNNLVNVAASSIATALAIEIFGTKGVGIATAGVT LFILVFGEITPKSFATQNAELASKWVAGYIRIFSYLFFPFIKVLTFVTNFIIKALGGQ PQKNEPFVTEEEIKKFVTVGEKEGVIESDEKEMINSIFDFDDTLVKEIMIPRIDMVCV DIETSIDDLVELIIDLGYSRIPVYNDTVDNIVGILYAKDLLTFLNTEEPTELRKIMRP AYYVPETKEVDTLLTELRKERIHMAIVLDEYGGTAGLITIEDLLEEIVGDIQDEYDEE ENLIEVISDDEILVDARIDIDEVNEVLNIHLPEEDYETVGGFILSTLGYVPETGEELE FENLKLIIEETIQRRISEVRIKTKVEEEAPESEKQD" misc_feature 669967..671157 /locus_tag="Acear_0620" /note="Hemolysins and related proteins containing CBS domains [General function prediction only]; Region: TlyC; COG1253" /db_xref="CDD:31445" misc_feature 669967..670458 /locus_tag="Acear_0620" /note="Domain of unknown function DUF21; Region: DUF21; pfam01595" /db_xref="CDD:190047" misc_feature 670528..670854 /locus_tag="Acear_0620" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the CorC_HlyC domain. CorC_HlyC is a transporter associated domain. This small domain is found in Na+/H+ antiporters, in proteins involved in...; Region: CBS_pair_CorC_HlyC_assoc; cd04590" /db_xref="CDD:73090" misc_feature 670903..671130 /locus_tag="Acear_0620" /note="Transporter associated domain; Region: CorC_HlyC; pfam03471" /db_xref="CDD:190650" gene 671210..671827 /locus_tag="Acear_0621" /db_xref="GeneID:9512643" CDS 671210..671827 /locus_tag="Acear_0621" /note="COGs: COG2928 conserved hypothetical protein; InterPro IPR007462; KEGG: hor:Hore_12550 hypothetical protein; PFAM: protein of unknown function DUF502; SPTR: B8CXI6 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF502)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827228.1" /db_xref="GI:302391408" /db_xref="GeneID:9512643" /translation="MLKNLRNYLITGLIILLPLVVTIYIVTVIFSAVDGFLRPVIELV IGRSVYGLGFILTLAVILGVGIIGTNVLGKRLIEVGEKFLTKIPLVKNIYVTVQQIIN ALFLKNKTAFRKVVVIEYPRKGLYQLGFLTSDGVGEVQQKTDAEVVNVFVPTTPNPTS GKLVLVPHKEITYLDMTVEEGLKFIISGGTVVPKKNDINLLNSKD" misc_feature 671210..671788 /locus_tag="Acear_0621" /note="Protein of unknown function (DUF502); Region: DUF502; cl01107" /db_xref="CDD:194037" gene 671853..672260 /locus_tag="Acear_0622" /db_xref="GeneID:9512644" CDS 671853..672260 /locus_tag="Acear_0622" /EC_number="3.5.4.5" /note="COGs: COG0295 Cytidine deaminase; InterPro IPR016192:IPR002125:IPR016193:IPR006262; KEGG: tpd:Teth39_1828 cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; PRIAM: Cytidine deaminase; SPTR: B0KCB0 Cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric" /codon_start=1 /transl_table=11 /product="cytidine deaminase" /protein_id="YP_003827229.1" /db_xref="GI:302391409" /db_xref="GeneID:9512644" /translation="MEDKLQDKLIKAAINARKNAYVPYSEFAVGAAVLTEEGKIYGGC NIENISYSMTNCAERTAIFKAVSNEEDTKIRAIAIVADTKHPCVPCGACRQVMIEFGD RDLEVIMANLAGDTLIKELDELFWGSVNEEILG" misc_feature 671880..672197 /locus_tag="Acear_0622" /note="Cytidine deaminase zinc-binding domain. These enzymes are Zn dependent. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a water molecule to form a hydroxide ion that performs a nucleophilic attack on...; Region: cytidine_deaminase; cd01283" /db_xref="CDD:29826" misc_feature order(671931..671933,671937..671939,671985..671987, 671991..671993,672018..672026,672120..672122, 672129..672131) /locus_tag="Acear_0622" /note="active site" /db_xref="CDD:29826" misc_feature order(672018..672026,672117..672122,672129..672131) /locus_tag="Acear_0622" /note="catalytic motif [active]" /db_xref="CDD:29826" misc_feature order(672018..672020,672024..672026,672120..672122, 672129..672131) /locus_tag="Acear_0622" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:29826" gene 672263..672718 /locus_tag="Acear_0623" /db_xref="GeneID:9512645" CDS 672263..672718 /locus_tag="Acear_0623" /note="InterPro IPR016181:IPR000182; KEGG: bbe:BBR47_51350 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1TS64 Acetyltransferase; PFAM: Acetyltransferase (GNAT) family" /codon_start=1 /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_003827230.1" /db_xref="GI:302391410" /db_xref="GeneID:9512645" /translation="MDYEIRVITEYSQQLLDELIQIEVDAFGRGGLNKWHLVPMINHG RVFVIYNKDKPVGLAEVLRDFEDSELVYLFGLSIRREYRNQGLGSKLLEYILQQLREE GFDKLELTVAPDNQSAYSLYKSKFGFEKEEYRPKEYGRDEPRFVMKVDL" misc_feature 672398..672592 /locus_tag="Acear_0623" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cd04301" /db_xref="CDD:173926" misc_feature order(672488..672496,672524..672529) /locus_tag="Acear_0623" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene 672722..673642 /locus_tag="Acear_0624" /db_xref="GeneID:9512646" CDS 672722..673642 /locus_tag="Acear_0624" /note="COGs: COG1159 GTPase; InterProIPR015946:IPR002917:IPR004044:IPR009019:IPR 005225:IPR005662; KEGG: aoe:Clos_1252 GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; SPTR: A8MG70 GTP-binding protein era homolog; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain" /codon_start=1 /transl_table=11 /product="GTP-binding protein Era" /protein_id="YP_003827231.1" /db_xref="GI:302391411" /db_xref="GeneID:9512646" /translation="MECDETLNKEENFKSGFVTVIGQPNVGKSTLINHLIGQKIAITT PKKQTTRNKLQCILTRDNAQLIFIDTPGVHRPKDKMGEYMVDTAYKALKKVELIYFMV DAQKGITDLERKINNQLSGIQTPTIIVLNKIDLVSKAKLKDVIESCRRLGDYAELIPV SAETGENTNTLIDKSIELLPDGPKYYPEDMVTDQIEQFVITELIREKIMYLTREEVPH SVALEVVQMGERENKDLIDVNVNIYVERESQKGIIIGKGGKRLKEIGRRAREDIEALL GSQIYLDLWVKVRKDWRDKEDALKMLGYRG" misc_feature 672752..673633 /locus_tag="Acear_0624" /note="GTPase Era; Reviewed; Region: era; PRK00089" /db_xref="CDD:178854" misc_feature 672758..673258 /locus_tag="Acear_0624" /note="Era subfamily. Era (E. coli Ras-like protein) is a multifunctional GTPase found in all bacteria except some eubacteria. It binds to the 16S ribosomal RNA (rRNA) of the 30S subunit and appears to play a role in the assembly of the 30S subunit...; Region: Era; cd04163" /db_xref="CDD:133363" misc_feature 672785..672808 /locus_tag="Acear_0624" /note="G1 box; other site" /db_xref="CDD:133363" misc_feature order(672791..672811,672851..672853,672863..672871, 672935..672937,673112..673117,673121..673123, 673202..673207) /locus_tag="Acear_0624" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133363" misc_feature order(672830..672832,672836..672880) /locus_tag="Acear_0624" /note="Switch I region; other site" /db_xref="CDD:133363" misc_feature 672869..672871 /locus_tag="Acear_0624" /note="G2 box; other site" /db_xref="CDD:133363" misc_feature order(672923..672940,672998..673003) /locus_tag="Acear_0624" /note="Switch II region; other site" /db_xref="CDD:133363" misc_feature 672926..672937 /locus_tag="Acear_0624" /note="G3 box; other site" /db_xref="CDD:133363" misc_feature 673112..673123 /locus_tag="Acear_0624" /note="G4 box; other site" /db_xref="CDD:133363" misc_feature 673202..673210 /locus_tag="Acear_0624" /note="G5 box; other site" /db_xref="CDD:133363" gene 673651..674991 /locus_tag="Acear_0625" /db_xref="GeneID:9512647" CDS 673651..674991 /locus_tag="Acear_0625" /note="COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR006668:IPR000644:IPR006667:IPR006669; KEGG: hor:Hore_12500 magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; hypothetical protein; SPTR: B8CXI1 Magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE)" /codon_start=1 /transl_table=11 /product="magnesium transporter" /protein_id="YP_003827232.1" /db_xref="GI:302391412" /db_xref="GeneID:9512647" /translation="MEEMTAEIKKLIAREDEALLQQKVDELYPADLAEVLVDTTEEET EVLVDLIEEEKLAHILAEVDYEVEKKLLKFLSNNRLTYILDEMYSDDVVDLLGALNIG QTKEFLTLMKQEEAEQIQHLLGYDEESAGGRMTTEYIAMKQDKTVAESIQKLRDIAPE AEMIYYIYVVDEKQELTGVLSMRELIAASPEKKVKDIMHEQVITVNLSLDQEEVAQII SKYDLLAVPVVNRQGLLLGIITFDDILDVIEEEATEDMHKMAGNVEVDVEHEGEVING VIRRLPWLIILLFASLLSANVLEFFEDVLNTVVILTFFMPTLAGTGGNAATQSLAVVV RGLAIGDIKSKEILGYLWNELKVGVLIALSCGLIIGLVAFIWQGNYMLGTVVGLAMIG NIITATVIGTAMPFIINYFGADPAVAAGPFITTLIDVFGYFIYFSLAKLFINYL" misc_feature 673657..674988 /locus_tag="Acear_0625" /note="Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]; Region: MgtE; COG2239" /db_xref="CDD:32420" misc_feature 673729..674034 /locus_tag="Acear_0625" /note="MgtE intracellular N domain; Region: MgtE_N; cl15244" /db_xref="CDD:197452" misc_feature 674068..674394 /locus_tag="Acear_0625" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain in the magnesium transporter, MgtE. MgtE and its homologs are found in eubacteria, archaebacteria, and eukaryota. Members of this family transport Mg2+ or other...; Region: CBS_pair_Mg_transporter; cd04606" /db_xref="CDD:73106" misc_feature 674590..674967 /locus_tag="Acear_0625" /note="Divalent cation transporter; Region: MgtE; cl00786" /db_xref="CDD:120115" gene 675018..675728 /locus_tag="Acear_0626" /db_xref="GeneID:9512648" CDS 675018..675728 /locus_tag="Acear_0626" /EC_number="4.1.2.4" /note="COGs: COG0274 Deoxyribose-phosphate aldolase; InterPro IPR011343:IPR013785:IPR002915; KEGG: hor:Hore_12490 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Deoxyribose-phosphate aldolase; SPTR: B8CXI0 Deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase" /codon_start=1 /transl_table=11 /product="deoxyribose-phosphate aldolase" /protein_id="YP_003827233.1" /db_xref="GI:302391413" /db_xref="GeneID:9512648" /translation="MAIKPKDMAKMLDHTILKPDATIQEVKKKCEEAKEYDFVSVCVN PCYVPLATKLLEDSSVKVCTVVGFPLGGSITEVKAFEAKNAIRNGAQEIDMVANISAI KSGEFGVVHDDIKTVVDATKVSGVTREVITKVIIETCYLTKEEIIKTSEIIKDIGADF VKTSTGFGPEGATKENVGLIRKTVGRPVGVKAAGGIRNFDDALDMLDAGANRIGSSSG VAIVTGKRREEDEEEEEE" misc_feature 675039..675665 /locus_tag="Acear_0626" /note="2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family; Region: DeoC; cd00959" /db_xref="CDD:188646" misc_feature order(675066..675068,675072..675074,675078..675080, 675150..675158,675219..675221,675243..675245, 675258..675260,675273..675284,675309..675311, 675315..675317,675372..675377,675435..675437) /locus_tag="Acear_0626" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:188646" misc_feature order(675501..675503,675510..675512,675594..675602, 675657..675665) /locus_tag="Acear_0626" /note="active site" /db_xref="CDD:188646" misc_feature 675501..675503 /locus_tag="Acear_0626" /note="catalytic residue [active]" /db_xref="CDD:188646" gene 676004..677377 /locus_tag="Acear_0627" /db_xref="GeneID:9512649" CDS 676004..677377 /locus_tag="Acear_0627" /EC_number="2.8.1.7" /note="COGs: COG0520 Selenocysteine lyase; InterPro IPR020578:IPR015421:IPR000192:IPR015424; KEGG: swo:Swol_2429 cysteine desulfurase; PFAM: aminotransferase class V; PRIAM: cysteine desulfurase; SPTR: Q0AU86 cysteine desulfurase; PFAM: Aminotransferase class-V" /codon_start=1 /transl_table=11 /product="cysteine desulfurase" /protein_id="YP_003827234.1" /db_xref="GI:302391414" /db_xref="GeneID:9512649" /translation="MRKRFVNRIRREIIGVGTKVPLNNGRHIQYINFDNAASTPAFRR VNHKVEEFLAWYSNVHRGSGFKSQLATEVYDKVRRLVADFVGADFEENKVIFLKNTTE AINKLVAALDLSQDDVVITTVMEHHSNMLPWRSQAEVVYAEVDKNGRLDINDLEKKLA TYHSRVKLVAVSGASNVTGYLNPIHKIARLAHRYNSQILVDGAQLIPHRSVEMKANSN TEHIDYLAFSAHKMYAPLGCGVLVGPKECFAGQEPDYSGGGTIEAVTLDDVVWAESPE KEEAGTPNIVGAVALGASIKMIQKIDWEALIEQEERLRKYLLKQLQQLEEVKLYGAMA KGVPDNQVGVISFNLDSFHHSLVASILGREWGIGVRSGCFCAQPYLHRLLDLANREIE EFKDKLRRNEDVKRPGLVRVSFGCYNTIKEIQRLIKGLQSIIDRQKKGADFNDEQEYD FEQYFKL" misc_feature 676067..677311 /locus_tag="Acear_0627" /note="Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]; Region: csdA; COG0520" /db_xref="CDD:30866" misc_feature 676100..677293 /locus_tag="Acear_0627" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl00321" /db_xref="CDD:193768" misc_feature order(676301..676306,676313..676315,676520..676522, 676604..676606,676613..676615,676685..676687, 676694..676696) /locus_tag="Acear_0627" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99742" misc_feature 676694..676696 /locus_tag="Acear_0627" /note="catalytic residue [active]" /db_xref="CDD:99742" gene 678350..679312 /locus_tag="Acear_0628" /db_xref="GeneID:9512650" CDS 678350..679312 /locus_tag="Acear_0628" /note="COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: tro:trd_1524 dipeptide ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C4CMX9 ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_003827235.1" /db_xref="GI:302391415" /db_xref="GeneID:9512650" /translation="MFNYIIKRLIFLIPVVIIVAIVAFLITHVIPGDPVRVMLGNFAS EDQVMQLKSQLGMNKPLHLQFMQWITRIVKGDFGKSLFLNIPVTEAILSRIEPTFILA IIGEILGIGIGVPMGVIAAVNHKSWIDQLSITVSLAGVSIPSFWLSLMLILVFGVKLR WFPVCGYEPLAKAGLGSIKYLILPGVTLGFMQSGLIARMTRSAMLDVLKQDYIRTARN KGLAERVVIARHAMKNALIPVVTVIGLNLAVLLGGTWIVETVFNIPGTGSLAINAIMK RDLPVIQGCMIFIAILYVLMNLFVDISYAFINPKVRYKNKGGGA" misc_feature 678350..679294 /locus_tag="Acear_0628" /note="ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Region: DppB; COG0601" /db_xref="CDD:30946" misc_feature 678689..679255 /locus_tag="Acear_0628" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(678692..678697,678710..678712,678743..678754, 678758..678787,678794..678799,678803..678805, 678920..678925,678929..678931,678935..678937, 678944..678949,678953..678955,678965..678970, 678977..678979,679028..679030,679070..679075, 679082..679084,679103..679114,679121..679126, 679151..679156,679205..679210,679217..679222, 679226..679231,679238..679243,679250..679255) /locus_tag="Acear_0628" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(678761..678805,679103..679120) /locus_tag="Acear_0628" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(678803..678805,678905..678907,679121..679123, 679145..679147,679154..679156,679205..679207) /locus_tag="Acear_0628" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(678980..679018,679034..679039,679049..679051) /locus_tag="Acear_0628" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 679309..680151 /locus_tag="Acear_0629" /db_xref="GeneID:9512651" CDS 679309..680151 /locus_tag="Acear_0629" /note="COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: rfr:Rfer_0983 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q21ZS6 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_003827236.1" /db_xref="GI:302391416" /db_xref="GeneID:9512651" /translation="MKDINAFLKEVKQHPYIIIGGTIVIVAILMSLLAPFLTSFNPTN VDAKNRLLSPSITHPMGTDQYGRDIMSRVLFGTRSSIEVGVSVVLLTTILGGIAGIAA GYFPKLDNVIMRVLDGFMAFPGIIIAICLAAIWGAGKLNIILALSFAYFPKMARIVRS CVMTVKESDCVESARSVGAKNMYIIFKYILLNSLSPIIVQATFSFAMAILDEAALSFL GVGITPPNPSLGGMITDARDFMAVAPWGIFFPGFMIIVIVLGLNLLGDGLRDVLDPRL QGKY" misc_feature 679339..680145 /locus_tag="Acear_0629" /note="D-ala-D-ala transporter subunit; Provisional; Region: PRK09881" /db_xref="CDD:182131" misc_feature 679618..680055 /locus_tag="Acear_0629" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(679642..679653,679657..679686,679693..679698, 679702..679704,679753..679758,679762..679764, 679768..679770,679777..679782,679786..679788, 679798..679803,679810..679812,679861..679863, 679903..679908,679915..679917,679936..679947, 679954..679959,679999..680004,680032..680037, 680044..680049,680053..680055) /locus_tag="Acear_0629" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(679660..679704,679936..679953) /locus_tag="Acear_0629" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(679702..679704,679738..679740,679954..679956, 679993..679995,680002..680004,680032..680034) /locus_tag="Acear_0629" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(679813..679851,679867..679872,679882..679884) /locus_tag="Acear_0629" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 680175..680327 /locus_tag="Acear_0630" /db_xref="GeneID:9512652" CDS 680175..680327 /locus_tag="Acear_0630" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827237.1" /db_xref="GI:302391417" /db_xref="GeneID:9512652" /translation="MKKISQIKNRSEKLKNIIALSIAFFSIIMPVVIFSVSTVFIFFI IIKILV" gene 680344..681339 /locus_tag="Acear_0631" /db_xref="GeneID:9512653" CDS 680344..681339 /locus_tag="Acear_0631" /note="COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR017871:IPR003439:IPR013563:IPR003593:IPR 010066; KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Q67KI9 Oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, ATPase subunit" /protein_id="YP_003827238.1" /db_xref="GI:302391418" /db_xref="GeneID:9512653" /translation="MKSRLLKVNNLRTCFHTSEGKVPAVDGVNFHLNKGEIVAIVGES GSGKSVTALSIMNSIPSPPGSIEAGEIIFNNEDILEKSEKEMRKIRGNEISMIFQDPG TALNPVFTIGRQISESLELHKGLSRKEGKKQAVELLRMVGIPSPKECISEYPHQLSGG MKQRVMIAMALSCKPELLIADEPTTGLDVTIQAQILEIMKDLKEELEMAILIITHDLG VVAEMSERVVVMYAGKVVEIAEVKDLFKHPKHPYTRGLLASIPSLTKSEDRLNVIGGS IPEPTELSEGCSFYERCEYAKEICKKEEPSLRNIADNRYLSCWIDTKEYISEVVV" misc_feature 680356..681300 /locus_tag="Acear_0631" /note="ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Region: DppD; COG0444" /db_xref="CDD:30793" misc_feature 680356..681060 /locus_tag="Acear_0631" /note="The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane...; Region: ABC_NikE_OppD_transporters; cd03257" /db_xref="CDD:73016" misc_feature 680467..680490 /locus_tag="Acear_0631" /note="Walker A/P-loop; other site" /db_xref="CDD:73016" misc_feature order(680476..680481,680485..680493,680638..680640, 680884..680889,680986..680988) /locus_tag="Acear_0631" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73016" misc_feature 680629..680640 /locus_tag="Acear_0631" /note="Q-loop/lid; other site" /db_xref="CDD:73016" misc_feature 680812..680841 /locus_tag="Acear_0631" /note="ABC transporter signature motif; other site" /db_xref="CDD:73016" misc_feature 680872..680889 /locus_tag="Acear_0631" /note="Walker B; other site" /db_xref="CDD:73016" misc_feature 680896..680907 /locus_tag="Acear_0631" /note="D-loop; other site" /db_xref="CDD:73016" misc_feature 680974..680994 /locus_tag="Acear_0631" /note="H-loop/switch region; other site" /db_xref="CDD:73016" misc_feature 681043..681300 /locus_tag="Acear_0631" /note="Oligopeptide/dipeptide transporter, C-terminal region; Region: oligo_HPY; cl07097" /db_xref="CDD:195461" gene 681336..682319 /locus_tag="Acear_0632" /db_xref="GeneID:9512654" CDS 681336..682319 /locus_tag="Acear_0632" /note="COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterProIPR017871:IPR003439:IPR013563:IPR003593:IPR 010066; KEGG: hor:Hore_04940 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Q5WIM8 Oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, ATPase subunit" /protein_id="YP_003827239.1" /db_xref="GI:302391419" /db_xref="GeneID:9512654" /translation="MIDKQQDDNILKVKDLVKYFTVTSGIFSEEDSVKAVNGISFNVK RGETLGIVGESGCGKSTAGRTILKLLEPTEGKVIFNGKNIYEMTDEELRRLRRNMQII FQDPFASLNPRMKVGELIKEPLRVHGIESKKERINKVKDIIEVVGLNESHLNKYPHEF SGGQRQRICIARALILNPKFIVCDEVVSALDVSIQSQIINLLKDLQDQFGLTYIFISH DLSVVKHISDRIAVMYLGEIVELASIDELFNNPVHPYTKALLSAIPVPDPEVNKERII LEGDVPSSRNMPSGCSFHTRCPYNEEICSLEKPKLKEKGNEHFVSCHLKCS" misc_feature 681351..682304 /locus_tag="Acear_0632" /note="dipeptide transporter ATP-binding subunit; Provisional; Region: dppF; PRK11308" /db_xref="CDD:183084" misc_feature 681363..682061 /locus_tag="Acear_0632" /note="The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane...; Region: ABC_NikE_OppD_transporters; cd03257" /db_xref="CDD:73016" misc_feature 681492..681515 /locus_tag="Acear_0632" /note="Walker A/P-loop; other site" /db_xref="CDD:73016" misc_feature order(681501..681506,681510..681518,681645..681647, 681885..681890,681987..681989) /locus_tag="Acear_0632" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73016" misc_feature 681636..681647 /locus_tag="Acear_0632" /note="Q-loop/lid; other site" /db_xref="CDD:73016" misc_feature 681813..681842 /locus_tag="Acear_0632" /note="ABC transporter signature motif; other site" /db_xref="CDD:73016" misc_feature 681873..681890 /locus_tag="Acear_0632" /note="Walker B; other site" /db_xref="CDD:73016" misc_feature 681897..681908 /locus_tag="Acear_0632" /note="D-loop; other site" /db_xref="CDD:73016" misc_feature 681975..681995 /locus_tag="Acear_0632" /note="H-loop/switch region; other site" /db_xref="CDD:73016" misc_feature 682044..682307 /locus_tag="Acear_0632" /note="Oligopeptide/dipeptide transporter, C-terminal region; Region: oligo_HPY; cl07097" /db_xref="CDD:195461" gene 682360..684000 /locus_tag="Acear_0633" /db_xref="GeneID:9512655" CDS 682360..684000 /locus_tag="Acear_0633" /note="COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: dps:DP1176 oligopeptide ABC transporter, oligopeptide-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: Q6AP19 Related to oligopeptide ABC transporter, oligopeptide-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle" /codon_start=1 /transl_table=11 /product="extracellular solute-binding protein family 5" /protein_id="YP_003827240.1" /db_xref="GI:302391420" /db_xref="GeneID:9512655" /translation="MKKVSKVLICILVLALTCTVISACSSKQAGVNEAAKKSSPQEMS SEDSRYGGTITVAKKMSVPHLDSDKSTDWQISSIMNHVYEGLFEFDSNFKAQPHLAKS YKISDNGKVYNIKLRKGVLFHNGKEMTAEDISASFNRWLKNNGAGKMVAPYFDKVKIL GKYEIVFKFNEPYAPFINILASPVSNQKLVIRPQEIIEKFGDEVITEHIGTGPYKLVK RIPDQKVKLTRFEDYVPSELHSSMYAGERKAYAKNIVFKIVDEQSVRVAGVKSGRFHF AEEAQQDQYEIFKSNPDVKPIVVNPDLMEMLIINCGNPPFDNINARRALVHAIDMEEL GSAMIGNEAFWDTEACLHPKGTIWYDKNAGKGIYNNYDLEKAKKLLDKANYDGSPIVI LSGRDDKVEKQGAIALKDQLEKVGFKVNLKLFDRPTVVEKRSKEKGWNLHLTMFSKAV PDPQIHAAWTGTDKWISNWDDKYSHQMDKIFAKMIRETDYEKRYKIVKEFYDKYWETV PYINLVDYSRLHLINKSLKNYKSSPQAFFWNTWIKKKQ" misc_feature 682360..683997 /locus_tag="Acear_0633" /note="ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism]; Region: DdpA; COG0747" /db_xref="CDD:31090" misc_feature 682516..683946 /locus_tag="Acear_0633" /note="The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold; Region: PBP2_NikA_DppA_OppA_like; cl01709" /db_xref="CDD:194181" gene 684260..685315 /locus_tag="Acear_0634" /db_xref="GeneID:9512656" CDS 684260..685315 /locus_tag="Acear_0634" /note="COGs: COG0407 uroporphyrinogen-III decarboxylase; KEGG: mac:MA0847 methyltransferase; SPTR: Q8TSF1 methyltransferase; PFAM: uroporphyrinogen decarboxylase (URO-D)" /codon_start=1 /transl_table=11 /product="uroporphyrinogen-III decarboxylase" /protein_id="YP_003827241.1" /db_xref="GI:302391421" /db_xref="GeneID:9512656" /translation="MEKLTTNERLRRLFKGDKIDRIPIIPSASLYAGNLAKVTSREYF LNYEKSFEIKKIAAEIFGYDENPEFNLPGYISWDFGGELHISNKFNIVEPQIIEYPVS DKNDLDNLFLPDLDEAPGFQNRLNFHRIARKNDLSVSIFAGSPLEVVGNIVDINTLIK WFYKKPEIVHSLLKLGVEYILESADYYIDEFGVENCIAFSAYPLESNTIMSEKMFKKF CLPYIMEIFEKLIQKQIKSFGIHLCGDHRLNLKYFKNLPLPDRSFISVSEKMDIELVA QMFGDKHIIGGNIPTSLLINGTANEVYNKSTAIINKMKNYAGGFALMPSCNLPPVTPP LNLYAMIKAVKENGIIR" misc_feature 684293..685297 /locus_tag="Acear_0634" /note="The URO-D_CIMS_like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases, as well as cobalamine (B12) independent methionine...; Region: URO-D_CIMS_like; cl00464" /db_xref="CDD:193829" gene 685383..687422 /locus_tag="Acear_0635" /db_xref="GeneID:9512657" CDS 685383..687422 /locus_tag="Acear_0635" /note="COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR006655:IPR009010:IPR006963:IPR006656:IPR 006657; KEGG: pth:PTH_0579 anaerobic dehydrogenases; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; SPTR: C5EGN5 Anaerobic dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain" /codon_start=1 /transl_table=11 /product="molybdopterin dinucleotide-binding region" /protein_id="YP_003827242.1" /db_xref="GI:302391422" /db_xref="GeneID:9512657" /translation="MEEIITTYCRMCLEECCINVHIKDGKIIDIKGNKNHPWNEGKVC VKGKAAMDWVYSENRIKKPLKKTEAGWKEVSLEKALDEIAEKMKGLKERYGAESVSFW KGEAIGFGQQEEYIRRFCHAFGTPNYFSCDSLCFASRYMGYSLVEGKMSTPDFQNSNY IVIWGNNPVITHINTAARIRKARKNGAKLVVIDPRETETASLADLHIQINPGTDGALA LGIINLIVKNNWYDKEFVSEYTIGFEKLKNYAKKFSPDYVKEETGVSKDRLYSLARDF SKHAPKAINHSGNGLEHHENGVNNIRAIASIGALCGCIDKKGGELLLEGLETRSLTLY DELPLEDIQPIGAQKFPLLYQYRRECNTMLGMEAILNGDPYHIRGMIITAANPALTNP NSNKVKNSLKNLELLVVRDLFMTETAEFADYVLPAASFFERSELVLNSNIKRVGLRKE IFTYKDCQDEYEFLESIAKRVGIKEYFPWDNEDEVNKWLLEGTEVSYKDLKEAELGVK YGDIKYRKYKEQPFNTLSGKIEFAARHLKNMGFSALPKYKLPSYAGALKQEYPYVLIT GARKMYHVHSRNGTMPDYLKDKVRPEVEIHPKDGKKLGVKDGDIVELSSKIGSIEISA KIVGEEDIMPKVLQITHGWRNFNVNEITDDFMNDPLSGFPAVRSLPVKVKKVKGN" misc_feature 685398..687032 /locus_tag="Acear_0635" /note="The MopB_Acetylene-hydratase CD contains acetylene hydratase (Ahy) and other related proteins. The acetylene hydratase of Pelobacter acetylenicus is a tungsten iron-sulfur protein involved in the fermentation of acetylene to ethanol and acetate...; Region: MopB_Acetylene-hydratase; cd02759" /db_xref="CDD:73326" misc_feature 685401..687410 /locus_tag="Acear_0635" /note="Anaerobic dehydrogenases, typically selenocysteine-containing [Energy production and conversion]; Region: BisC; COG0243" /db_xref="CDD:30592" misc_feature order(685407..685409,685416..685418,685428..685430, 685512..685514) /locus_tag="Acear_0635" /note="putative [Fe4-S4] binding site [ion binding]; other site" /db_xref="CDD:73326" misc_feature order(685518..685520,685692..685694,685776..685778, 685782..685790,685872..685877,685881..685883, 685890..685895,685956..685967,686016..686018, 686022..686024,686244..686255,686259..686261, 686532..686540,686550..686552,686610..686618, 686625..686627,686661..686666,686679..686681) /locus_tag="Acear_0635" /note="putative molybdopterin cofactor binding site [chemical binding]; other site" /db_xref="CDD:73326" misc_feature 687057..687407 /locus_tag="Acear_0635" /note="Molybdopterin-Binding, C-terminal (MopB_CT) domain of the MopB superfamily of proteins, a large, diverse, heterogeneous superfamily of enzymes that, in general, bind molybdopterin as a cofactor. The MopB domain is found in a wide variety of molybdenum-; Region: MopB_CT; cl09929" /db_xref="CDD:158784" misc_feature order(687090..687095,687099..687110,687303..687305, 687327..687329,687378..687383) /locus_tag="Acear_0635" /note="molybdopterin cofactor binding site; other site" /db_xref="CDD:30307" gene 687936..689669 /locus_tag="Acear_0636" /db_xref="GeneID:9512658" CDS 687936..689669 /locus_tag="Acear_0636" /EC_number="2.2.1.6" /note="COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766:IPR012846; KEGG: hor:Hore_10830 acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: B8CX18 Acetolactate synthase; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type" /codon_start=1 /transl_table=11 /product="acetolactate synthase, large subunit" /protein_id="YP_003827243.1" /db_xref="GI:302391423" /db_xref="GeneID:9512658" /translation="MEKLTGAEIVVESFYEEDVEVIFGYPGAAVIPIYDVLYDSDLEH ILVHHEQGGVHAADGYARSTGKVGVCLATSGPGATNLVTGLATAYMDSVPLVAITGQV PQSMIGTDSFQEADITGITLPITKHNYLVQDTKELPRIFKEAFHIARTGRPGPVLIDI TKDVLMDEAEVDYPKEVELPGYNPTYQGHELQIKEAAQEINAAQKPVIYAGGGVIISD ASSELRKLAQKASIPTTTTLTGLGAIDERNELSLGMLGMHGTVEANMAISNADLVIAI GARFDDRATGEMDGFAPEAKVIHIDIDPAEVGKRAPVDIPVVGDVKEVLTDLLSLVEE KETGSWQEKIEQWKRRDEDNQDLEDDKLTPRQIIEEIDDLTEGEALITTEVGQHQMWT AQFYNFSKPRSFITSGGLGTMGYGFPAAGGVQIGNPEETVFVLAGDGSFQMNQQELAT VVKNKLPINIVIFNNQYLGMVRQWQELFSDKRYAATCLGKMTDCPPNCSSPGEDCPEM VPDFVKLAASYGIEGRRITKKEEIRPALQEAIESDEPYLLDFIIEEEENVFPMVPAGG SLDQMILKEDV" misc_feature 687936..689663 /locus_tag="Acear_0636" /note="acetolactate synthase 3 catalytic subunit; Reviewed; Region: PRK06048" /db_xref="CDD:180368" misc_feature 687957..688415 /locus_tag="Acear_0636" /note="Pyrimidine (PYR) binding domain of POX and related proteins; Region: TPP_PYR_POX_like; cd07035" /db_xref="CDD:132918" misc_feature order(687996..687998,688011..688016,688026..688028, 688038..688040,688062..688082,688089..688091, 688098..688103,688110..688115,688119..688127, 688161..688163,688182..688184,688194..688196, 688203..688208) /locus_tag="Acear_0636" /note="PYR/PP interface [polypeptide binding]; other site" /db_xref="CDD:132918" misc_feature order(688011..688019,688026..688028,688038..688040, 688065..688067,688071..688082,688086..688088, 688161..688163,688170..688175,688179..688184, 688191..688193,688293..688295,688302..688304) /locus_tag="Acear_0636" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132918" misc_feature order(688011..688013,688083..688085,688161..688163, 688173..688175) /locus_tag="Acear_0636" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132918" misc_feature 688512..688919 /locus_tag="Acear_0636" /note="Thiamine pyrophosphate enzyme, central domain; Region: TPP_enzyme_M; pfam00205" /db_xref="CDD:189448" misc_feature 689019..689630 /locus_tag="Acear_0636" /note="Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS. AHAS catalyzes the condensation of two molecules of pyruvate to give the...; Region: TPP_AHAS; cd02015" /db_xref="CDD:48178" misc_feature order(689088..689099,689166..689168,689172..689174, 689247..689255,689262..689264,689328..689330) /locus_tag="Acear_0636" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:48178" misc_feature order(689157..689159,689166..689168,689172..689174, 689259..689264,689268..689273,689292..689294, 689463..689468,689478..689480,689487..689489) /locus_tag="Acear_0636" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48178" gene 689671..690150 /locus_tag="Acear_0637" /db_xref="GeneID:9512659" CDS 689671..690150 /locus_tag="Acear_0637" /EC_number="2.2.1.6" /note="COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR002912:IPR019455:IPR004789; KEGG: mma:MM_0669 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; SPTR: Q8PZ25 Acetolactate synthase small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit" /codon_start=1 /transl_table=11 /product="acetolactate synthase, small subunit" /protein_id="YP_003827244.1" /db_xref="GI:302391424" /db_xref="GeneID:9512659" /translation="MKHTLSVTVANEAGVLVRIAGLFSRRGFNINSLAVGKTESDDIS RITLVVEGTDETLEQVVKQLNKLIVVHKISDLTNVSAIDRGLALIKVKADIDDRSEVM QIVNTFRGKVVDVAQDSVTIEITGEKEKINALEDLLRPFGILELVRTGQIALARGKK" misc_feature 689671..690147 /locus_tag="Acear_0637" /note="acetolactate synthase 3 regulatory subunit; Reviewed; Region: ilvH; PRK11895" /db_xref="CDD:183365" misc_feature 689677..689892 /locus_tag="Acear_0637" /note="N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS); Region: ACT_AHAS; cd04878" /db_xref="CDD:153150" misc_feature order(689695..689697,689701..689703,689716..689718, 689755..689760,689773..689775,689800..689802) /locus_tag="Acear_0637" /note="putative valine binding site [chemical binding]; other site" /db_xref="CDD:153150" misc_feature order(689707..689712,689719..689721,689740..689742, 689749..689751,689761..689775,689803..689805) /locus_tag="Acear_0637" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:153150" misc_feature 689920..690141 /locus_tag="Acear_0637" /note="Small subunit of acetolactate synthase; Region: ALS_ss_C; pfam10369" /db_xref="CDD:150959" gene 690256..690987 /locus_tag="Acear_0638" /db_xref="GeneID:9512660" CDS 690256..690987 /locus_tag="Acear_0638" /note="KEGG: aoe:Clos_0138 metal dependent hydrolase; SPTR: A8MFR6 Putative metal dependent hydrolase" /codon_start=1 /transl_table=11 /product="metal dependent hydrolase" /protein_id="YP_003827245.1" /db_xref="GI:302391425" /db_xref="GeneID:9512660" /translation="MTAEIDIYHLYHSGICIKTENYCLVFDYCNDQPAGEEKRIENGV LTTEELAEQEKGLVFVTHNHGDHFNPVIFDWAEELDTIEYILSNDVQVQDQENRHKVG KYQELKLDDVYIETYGTTDQGVSFYVEVDGFNIFHSGDLNWWHWKKFTLEERKQEEVE FKQELDRLEGKEIDIACVPVDHRLEEHYYLAGRYFAETIEPEMIVPIHFRDNYYITSD FVDEIADLPVNAVEITERGQKIIFN" misc_feature 690274..690981 /locus_tag="Acear_0638" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" gene complement(690984..692021) /locus_tag="Acear_0639" /db_xref="GeneID:9512661" CDS complement(690984..692021) /locus_tag="Acear_0639" /EC_number="2.7.7.63" /note="COGs: COG0095 Lipoate-protein ligase A; InterPro IPR005107:IPR004143:IPR019491:IPR004562; KEGG: hor:Hore_05080 lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; Lipoate protein ligase-like; PRIAM: Lipoate--protein ligase; SPTR: B8D239 Lipoate-protein ligase; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: Bacterial lipoate protein ligase C-terminus; Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoyltransferase and lipoate-protein ligase" /codon_start=1 /transl_table=11 /product="lipoyltransferase and lipoate-protein ligase" /protein_id="YP_003827246.1" /db_xref="GI:302391426" /db_xref="GeneID:9512661" /translation="MTNKALNSKLVFGTSYNPWYNLAVEEYLIKHIGKQDIILYLWQN DNTVVIGRNQNAWQECHIEDLRRAGGKLARRLSGGGAVFHDLGNLNYTLLMKKKFYNL EEQLIVIVRALNNLGIEAEFSGRNDIVCCGKKISGNAFYYGTKGAYIHGTVLVDTDLD KLTSYLKVSSEKIKSKGIDSVKSRVMNLTDIDNNLTVAQVKDSIQASFQESYNQEQPL TEINIDPTEEKLQELYDKYSDWDWRFGATPDCDISIDNHFTWGEVEINLKLANGYIEQ ATIYSDAMYSDLIEQISVALEERPFKLKVILATVEDVFANYQFPTKINENQLAKEFIT WFKSELEEVIF" misc_feature complement(691071..691979) /locus_tag="Acear_0639" /note="lipoyltransferase and lipoate-protein ligase; Region: lipoyltrans; TIGR00545" /db_xref="CDD:161920" misc_feature complement(691548..691874) /locus_tag="Acear_0639" /note="Biotin/lipoate A/B protein ligase family; Region: BPL_LplA_LipB; cl14057" /db_xref="CDD:187213" misc_feature complement(691032..691283) /locus_tag="Acear_0639" /note="Bacterial lipoate protein ligase C-terminus; Region: Lip_prot_lig_C; pfam10437" /db_xref="CDD:151014" gene complement(692011..693942) /locus_tag="Acear_0640" /db_xref="GeneID:9512662" CDS complement(692011..693942) /locus_tag="Acear_0640" /EC_number="1.8.1.4" /note="COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR012999:IPR003016:IPR013027:IPR000815:IPR 004099:IPR000089:IPR016156:IPR011053:IPR006258; KEGG: hor:Hore_21030 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; biotin/lipoyl attachment domain-containing protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: B8CZZ6 Dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Biotin-requiring enzyme; TIGRFAM: dihydrolipoamide dehydrogenase" /codon_start=1 /transl_table=11 /product="dihydrolipoamide dehydrogenase" /protein_id="YP_003827247.1" /db_xref="GI:302391427" /db_xref="GeneID:9512662" /translation="MLIKLDPEQLPEDADQAKITEICVQPGENIKPETVIMQLEADKT SISLTSKKSGTIKKILVTEDEEIEVQQPLVKIASKPIPIKLSTEQLPNDTEEAQVTNL PLKTGDKVTAGEVICELEADKTTITLESKQSGTIAEIKIAEEDTVQTGETLLTITPAQ QETKDKQDIKSTSSSETETEITVIGGGPGGYVAALKAAKLGADVTLIEKEKLGGTCLN WGCIPTKALVRSAQVYTNLKEAEEFGCQAENIDFNWESILERKENIVTKLTQGIEQLL TTHEIKVISGTAQLKDETTVEVTTADEEVIVNTEQMIIATGSQPVQLPIIDDKAVDHL LYSRQALDLDELPEKMVIIGGGVIGLEFAFIFSRLDVEVTVIEYLDEVLSFLDSDITE EITQAAQTEGIDIYTSAQAKQITSTADDQCLVKFEYQNSEQYITADRALMAVGRKPDL GGLEVEKLGIELDKETDGIQVNDRMQTTIDNIYAIGDVTGKTQLAHAASHQGIVAVKN IMDQPEKMDYNTIPTAIFTKPEIASVGMTEKEAAKADHTVKIGKFPVAANGKALTLGE TTGFVKIIADAKTDQVLGGAIIGPHATDLIAEITLAVNNQLTTEEVIETIHAHPTSAE TIHEAALAVRPEGALHYDE" misc_feature complement(693715..693918) /locus_tag="Acear_0640" /note="Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid...; Region: lipoyl_domain; cd06849" /db_xref="CDD:133458" misc_feature complement(order(693796..693798,693808..693825, 693844..693846)) /locus_tag="Acear_0640" /note="E3 interaction surface; other site" /db_xref="CDD:133458" misc_feature complement(693814..693816) /locus_tag="Acear_0640" /note="lipoyl attachment site [posttranslational modification]; other site" /db_xref="CDD:133458" misc_feature complement(693475..693702) /locus_tag="Acear_0640" /note="Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid...; Region: lipoyl_domain; cd06849" /db_xref="CDD:133458" misc_feature complement(order(693556..693558,693568..693585, 693604..693606)) /locus_tag="Acear_0640" /note="E3 interaction surface; other site" /db_xref="CDD:133458" misc_feature complement(693574..693576) /locus_tag="Acear_0640" /note="lipoyl attachment site [posttranslational modification]; other site" /db_xref="CDD:133458" misc_feature complement(692044..693402) /locus_tag="Acear_0640" /note="dihydrolipoamide dehydrogenase; Region: lipoamide_DH; TIGR01350" /db_xref="CDD:162312" misc_feature complement(<693223..693396) /locus_tag="Acear_0640" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(692671..692898) /locus_tag="Acear_0640" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(692053..692382) /locus_tag="Acear_0640" /note="Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Region: Pyr_redox_dim; pfam02852" /db_xref="CDD:190451" gene 694165..694602 /locus_tag="Acear_0641" /db_xref="GeneID:9512663" CDS 694165..694602 /locus_tag="Acear_0641" /note="COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR015946:IPR003718; KEGG: mta:Moth_1892 OsmC-like protein; PFAM: OsmC family protein; SPTR: Q2RH97 OsmC-like protein; PFAM: OsmC-like protein" /codon_start=1 /transl_table=11 /product="OsmC family protein" /protein_id="YP_003827248.1" /db_xref="GI:302391428" /db_xref="GeneID:9512663" /translation="MSEETFTATVNLLEGVTVEAESRGHKIIMDEPEKMGGTDEGMNP VELTLCSLGGCLSICASMFAKSCDVELNDFSVELEGDIDLSGFKGADNVDPGFQDVRF TLYIDSDSPEENIKELVELIENRCPVSDSLQRNITIAGDYEIK" misc_feature 694273..694578 /locus_tag="Acear_0641" /note="OsmC-like protein; Region: OsmC; cl00767" /db_xref="CDD:193933" gene 694947..696285 /locus_tag="Acear_0642" /pseudo /db_xref="GeneID:9512664" gene complement(696490..696642) /locus_tag="Acear_0643" /db_xref="GeneID:9512665" CDS complement(696490..696642) /locus_tag="Acear_0643" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827249.1" /db_xref="GI:302391429" /db_xref="GeneID:9512665" /translation="MNKDNTNLLTKFIDWLGNKPVNKQQMLNETNYLLKDKSARKIYD FLEKDD" gene 696737..698944 /locus_tag="Acear_0644" /db_xref="GeneID:9512666" CDS 696737..698944 /locus_tag="Acear_0644" /note="COGs: COG3886 HKD family nuclease; InterPro IPR006935:IPR001650:IPR014021:IPR014001; KEGG: cno:NT01CX_0321 helicase, PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A0Q2G7 Helicase, PFAM: NgoFVII restriction endonuclease; Helicase conserved C-terminal domain; type III restriction enzyme, res subunit" /codon_start=1 /transl_table=11 /product="type III restriction protein res subunit" /protein_id="YP_003827250.1" /db_xref="GI:302391430" /db_xref="GeneID:9512666" /translation="MLNAITGRKENLYSLFKKELKQAQEVKIIVAFLKESGVKLIVDD LKKQALKNGAEIKIITGKYLNITEPSALYLLKDKLGDMVDLRFYDKDSISFHPKAYFL KKEEEKVLFIGSSNISASAFTNGVEWNYRMIDEVDEVAYERFEQEFDRIFAEESTVID EEELRNYASSWSKPQVEIVEEKEEPERPEPRGAQIEALHELKLARKEGVKKGLVVAAT GVGKTYLVAFDSIKFDKVLFVAHREEILRQTKKTYESIEPELEVTFFTGEEKDASGDI VLASVQKLRREEYLAEDHFLPDEFDYIVVDEFHHAGADSYLKVLDYFEPEFLLGKKDL EKKLSTHKRADLILRNYRNLAGQRTLGFCASINHARYMAEYFNENNIRAVCVHSSSDQ REYFMERKEAVEKLEAGDIDVIFAVDIFNEGVDIPALDTVLFLRPTESYVVFLQQLGR GLREYKEKEYLKVLDFIGNYKRAHYVPFLLAGENPMKKDKQDLKKIDDFDYPNGCQIS FDFEVIDLFNEIQKHDSFRDRMEEEYYRLKKYLGRRPLRKDIQEGVDIDTKEYMRRTY HGEKGYLRFLASIDELKEGEEEWLDIIVEKFLYRLERTSMNKSYKIPTLLALLEDGKL QPEVDIEEVGESFMNYYYNYKLHQKDLNNKKHEGWEEWSREEFKKAALENPVHFLTKG RESKFFSYDEINEQFRLSEDLVPYLNEDLAEHFKDILEYRSRRYFSRRFKEEG" misc_feature 696764..697192 /locus_tag="Acear_0644" /note="Catalytic domain of phospholipase D superfamily proteins; Region: PLDc_SF; cl15239" /db_xref="CDD:197447" misc_feature order(697022..697024,697028..697030,697076..697078, 697082..697084,697115..697117) /locus_tag="Acear_0644" /note="putative active site [active]" /db_xref="CDD:197200" misc_feature 697022..697024 /locus_tag="Acear_0644" /note="catalytic site [active]" /db_xref="CDD:197200" misc_feature 697364..697684 /locus_tag="Acear_0644" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 697391..697405 /locus_tag="Acear_0644" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 697652..697663 /locus_tag="Acear_0644" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature <697802..698095 /locus_tag="Acear_0644" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(697826..697837,697895..697900,697985..697993) /locus_tag="Acear_0644" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(698009..698011,698072..698074,698084..698086, 698093..698095) /locus_tag="Acear_0644" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene 698945..699256 /locus_tag="Acear_0645" /db_xref="GeneID:9512667" CDS 698945..699256 /locus_tag="Acear_0645" /note="KEGG: amt:Amet_1703 hypothetical protein; SPTR: A6TNW1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827251.1" /db_xref="GI:302391431" /db_xref="GeneID:9512667" /translation="MKEYDKLIRDRIPEIIKEDGKEYEVEVMEKEEYKEYLKEKLLEE AKEYIESEEVEELADVLEVIKTIAEVKEIGFEEIEEMRQKKADKRGRFKERLKLLRVY D" gene 699537..703001 /locus_tag="Acear_0646" /db_xref="GeneID:9512668" CDS 699537..703001 /locus_tag="Acear_0646" /note="InterPro IPR000943:IPR011991:IPR007630; KEGG: conserved hypothetical protein; PFAM: sigma-70 region 4 domain protein; SPTR: C3DG05 Putative uncharacterized protein; PFAM: Sigma-70, region 4" /codon_start=1 /transl_table=11 /product="sigma-70 region 4 domain protein" /protein_id="YP_003827252.1" /db_xref="GI:302391432" /db_xref="GeneID:9512668" /translation="MKNSGNDVVYIPDYLKNKSIPKNNENPLCRISKTYELNHFIDLT LDILKTVYKKEKTLFWNLVKQIAFYGVRFKNKLSKYNYVHSNDISVLYTKQRDEFIDY NMLDNYVFKNQLVSFGLIKIQDMDGVSLEAIENIKPKDIKVDLIKQFIKEQGFELVTP EEYCNYTYKISNKSKIRNEVRENRKQLNFNLSFDSDIKTLYDEINCYKENNFDIEDRL YFIQLLMKKLKEVDVNRLIKNIILNKNGDLLLNEIKDYLSVVGINISVKELQNNIKQL LKKSSKFNLIDFNEKTAIILSDYIKDLLNDGPLCLVDLKMKLELEDNWYFCLFSALKK INNIGLNKKRKICLTNNLNARIRFCINSALTKIKRLKNKKIDNLIKNLFINLETPLLL KEIKKYLMFLNIDLSLEEIDELLRNNADFKLIDVNKWSLDSWDEYPEFNEEFKSTWEQ ILSSFPEENRERDIDILNKRIFSNDYTLEKLGEEHSISRQRVRQLEESGMRKLVHYTR IKYIKPFLSLIENLFIDRIIISYNEFDELRKKYFLSLNINEVINFFNTMLKSEKKGVS FSNIISEVEYKLRNIEDKFISKRPLKNILGLINKIINEYFENNEVKYEKLSKLLRRNG IKDKKVIDELLKVNNDTLKIENMVYFINNAGKDDKCALILKEFFSNGVNISKKNDEIK ALLNKYFPLDFKESSNRSITGNIQRSNKIINWGRGDYIHIDNVHVIKDDLIQVKNWLK ERLNSDLIEIWANAAYREFKQYLKDLGIPNQHALYSLLEFYFGDEFHFYKSPRILPLS SKGTEPKQNSDVIEEYLLNVGRKVSKGELKKYFIEEMGWEDYTLSNHLSQAGNVIECN DGIYVHREYLQIDIEKLNQIADDLDNILEQNNSIISVSLIYDNKRVTVMSANISSEKE LYNYLETIHSDRFSFPFYPVIATKNYSSIQSKKDIFEEYFSKCNTSIFYNELKNKFKK LGFELREIYYGVSRSEDIIPLKKGHEYIYKDKLALTEEKKKYLQDLVLELLDASQRHY ISISRTILNNKNRSKLPNLGNSVSWREDLLVYFLSNMNKFLLLGTKDYVVMKKNNKLE IKDDSDFIAYILKNKFNGATKLKKIENFLSRINFISHDLAKSHTEEVSLYEIDNGEII HKDLLDRK" misc_feature 700890..701045 /locus_tag="Acear_0646" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cl01055" /db_xref="CDD:197420" misc_feature <702270..702524 /locus_tag="Acear_0646" /note="Photosystem I reaction centre subunit VI; Region: PSI_PsaH; cl03956" /db_xref="CDD:186608" gene 703010..705109 /locus_tag="Acear_0647" /db_xref="GeneID:9512669" CDS 703010..705109 /locus_tag="Acear_0647" /note="COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR006935:IPR001650:IPR014021:IPR014001; KEGG: nis:NIS_1675 hypothetical protein; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: A6Q5M2 Putative uncharacterized protein; PFAM: Helicase conserved C-terminal domain; type III restriction enzyme, res subunit" /codon_start=1 /transl_table=11 /product="type III restriction protein res subunit" /protein_id="YP_003827253.1" /db_xref="GI:302391433" /db_xref="GeneID:9512669" /translation="MLKDLNLKSVYDSSECNLITKLFIPLLSESFLYKRGVGYFTSGW LRLAAKGLDRLAENGGKVKLVTSPHLETNDWKSFVRGNKAQKDDLLYKSLRKKVSNLG DSLAQNTLTALAWLIADGILEVKFAIPNNNLGDFHDKFAIFEDYHGDKVAIHGSYNDS IKGNLNGESFSVFKSWVKGQSNYVEHHIDRFENIYSDQNDFFQIYNMPQAIRNEIVKL RKNKNRPYNLPDNHNLIKKRGIEIPKKINLYPFQKEALKKWFDNECHGIFEMATGTGK TITSLSCAVKLFKKVKQLITIIAVPFDHLVDQWKEDVINFGFNPILCRGSYRNWLGKL QSKLRDYEMGFRNSLCIIVTHKTAASDRFIKLVNDCKEDILFIGDEMHYLGAENLRKS LRQNYNYRLGLSATPDRWFDEEGTEYIKEYFGQIAKRYSLREAINNGFLTPYQYIPHI VELNDNELEEYNELTHKIVKVRNSVNDEDNEVLTRLLVKRADIIAKAKNKKRVLKELL EKQILNKGKESLSHTIVYCGRGEHKEVLKLLSNLGIQAHEFVHTVPTKERQRILDYFD EGDIQILVAMKCLDEGVNIPATKEAFFLASTSNPREFVQRRGRILRRYSGKHEALVHD FIVLPQTDKLDHLSEDMLKDYKSIVKKEMPRFAEFSLEAKNTFQARDKIYSILKRLNL LHLFDKKPWEVYEEYDL" misc_feature 703040..703600 /locus_tag="Acear_0647" /note="N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain; Region: PLDc_N_DEXD_a; cd09179" /db_xref="CDD:197276" misc_feature order(703418..703420,703424..703426,703475..703477, 703481..703483,703511..703513) /locus_tag="Acear_0647" /note="putative active site [active]" /db_xref="CDD:197276" misc_feature 703418..703420 /locus_tag="Acear_0647" /note="catalytic site [active]" /db_xref="CDD:197276" misc_feature 703733..705055 /locus_tag="Acear_0647" /note="DNA phosphorothioation system restriction enzyme; Region: dnd_restrict_1; TIGR04095" /db_xref="CDD:188610" misc_feature 703802..704230 /locus_tag="Acear_0647" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 703826..703840 /locus_tag="Acear_0647" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 704144..704155 /locus_tag="Acear_0647" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature 704486..704845 /locus_tag="Acear_0647" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(704591..704599,704657..704662,704735..704743) /locus_tag="Acear_0647" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(704759..704761,704822..704824,704834..704836, 704843..704845) /locus_tag="Acear_0647" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene 705126..705293 /locus_tag="Acear_0648" /db_xref="GeneID:9512670" CDS 705126..705293 /locus_tag="Acear_0648" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827254.1" /db_xref="GI:302391434" /db_xref="GeneID:9512670" /translation="MEEEIHQRVVDKINELPITERELALRALELSFRTNSSTVAEKLF SEINEIMDKEE" gene 705297..707351 /locus_tag="Acear_0649" /db_xref="GeneID:9512671" CDS 705297..707351 /locus_tag="Acear_0649" /note="COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: npu:Npun_F4484 hypothetical protein; PFAM: SMC domain protein; SPTR: B2IVN8 Putative uncharacterized protein; TIGRFAM: DNA sulfur modification protein DndD" /codon_start=1 /transl_table=11 /product="SMC domain protein" /protein_id="YP_003827255.1" /db_xref="GI:302391435" /db_xref="GeneID:9512671" /translation="MKIKDIELCNFKQYYGKQNIEFAGYDTDSSENVTVVYGENGRGK TSLYRALMFALYGDKFLDQDKNLQGSRNKDLNPDLYIVNINALKEDFEAENDGVEAYV KVNFINDNIEYSLYRSMFGIQNSQDEIFEEDGKVKLTVKNEDGNTKVIEDKEKIEQKV NSILDGRVKSYFLFDGERIERLTKATKEQKEEVAGGIKNLLKIDELNCSIDALEKLKK KIRKELKKISTGDYRKSIEKLDKLDNKKETLEKDLDSLSEELKYARKQEKDIENELAK FDEYKDLIYERKSLKKRKDELTNDREELSDKIRNFNNKAIMLLADDILENVFADINNK DISGIDIKVKKKVVDRILNQMKCICGTNLNLDSKEHKALKEWANEPEENVVDDRIMDF RDELIKAREYISNNKDNCDELLGSFSKLDGSIEEINSRLEQLDAEIDDVSDEEFEEKK EYRKKLIKDISNFEQEIENKEKKISEVENKIQQAENKRKNLEKQQNIKNEFSKKLELT ENTLAKLEKIKNLFISEVKDDLEEEATAIFKRLIDSATKDTFKRIIVNDDYSLEILDW NNRPFLANISAGQRQVMSLAFITALAKIAGGKDILEVPLFMDTPFGRLSGNHRDNLLK EIPELSPQWILLATDTEFTRVEAEELRKSGNWGKVYKLELIEDGYTKLKEVSVNQFKP KR" misc_feature 705297..707255 /locus_tag="Acear_0649" /note="DNA sulfur modification protein DndD; Region: DNA_S_dndD; TIGR03185" /db_xref="CDD:163179" misc_feature 705303..>705686 /locus_tag="Acear_0649" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 705408..705431 /locus_tag="Acear_0649" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(705417..705422,705426..705434,705672..705674) /locus_tag="Acear_0649" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" gene 707379..707858 /locus_tag="Acear_0650" /db_xref="GeneID:9512672" CDS 707379..707858 /locus_tag="Acear_0650" /note="KEGG: npu:Npun_F4487 hypothetical protein; SPTR: B2IVP1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827256.1" /db_xref="GI:302391436" /db_xref="GeneID:9512672" /translation="MRLQGDIRVQIEEKYNDIYKDLTQDNGIRKPVFDSYGRVFVLCS CLGFEYNKKIPLDKSKKLFWTDSLNNYNHAITILFSIAMLNKGEVNYKILSNDEKIIK ITEKYANGGMKVLIDEVLEPYIKEDDEKFYLDYSNSSFLEKEVLSFIRYEMKSSPFD" misc_feature 707400..>707741 /locus_tag="Acear_0650" /note="dnd system-associated protein 4; Region: dnd_assoc_4; TIGR04062" /db_xref="CDD:188577" gene 707985..710042 /locus_tag="Acear_0651" /db_xref="GeneID:9512673" CDS 707985..710042 /locus_tag="Acear_0651" /note="InterPro IPR007197; KEGG: nar:Saro_3946 radical SAM domain-containing protein; PFAM: radical SAM domain protein; SPTR: A3JX22 Putative uncharacterized protein; PFAM: radical SAM superfamily" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003827257.1" /db_xref="GI:302391437" /db_xref="GeneID:9512673" /translation="MVNILLLEPDYKNKYPPLGLMKISSYHKEKGDSVTFAKGQLRDD EKENDNWDRIYITTLFTFEWDKTIETIEYAKSLIEDKDNIFIGGILATLKPNEIEDKT GIKPITHRLDNDNEEAKRLIGYDNDHIIDNCTPDYEILDDIEYEYPYNDAYFAYMTRG CGMNCEFCAVQTLEPEYVPFISIKEQIKKINQQHGPKRNLLLMDNNVLRSPKFNDIVE EIKELGFARGATYTYENDKGKVITQKRYVDFNQGLDANLLTEEKAKKLSELAIRPARI AFDHIEDRDKYERAIRRCAKYGIKYFSNYMLYNADDFQGKGSQYKADSPEDLYKRLKI TMELQNDINKDKTEDKKVKIYSFPMKYIPLEDTDRSYIGPKWNAKFLRAIQVMLLPCS GVGGVSEEFFRKAFGEDLKEYKLNLRMPESILMSRGKFLQRDDESENELEKRLNEDRG ALVKSKYYKKWKRLYKSMKNEDKLLEVIGDNKFEADGYFEIENNKIKKIYLHYLSKSR FLTLLNKLVSNNLEKDINLVFDYVTDEFPFYIERIAKYIHDKRISHRKLRGYIKVFGK FGVKLILKNWVKNDLENKYLLSRLEKAMMHIGQEFINISKLRAMKRYIDSGCLNKSEI ALVKTYIKDLNEEGITRILKDYFSDFKRQLKFNNRDEPGFEKIEKKIEVLTAELGEQL SLF" misc_feature 707985..709370 /locus_tag="Acear_0651" /note="Fe-S oxidoreductase [Energy production and conversion]; Region: COG1032" /db_xref="CDD:31235" misc_feature 708450..708905 /locus_tag="Acear_0651" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene 710064..711410 /locus_tag="Acear_0652" /db_xref="GeneID:9512674" CDS 710064..711410 /locus_tag="Acear_0652" /note="InterPro IPR003594; KEGG: hmo:HM1_1330 hypothetical protein; SPTR: B0TGI7 Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827258.1" /db_xref="GI:302391438" /db_xref="GeneID:9512674" /translation="MLDDIIIGKHTLESLTAGMYSDAKVIYREYIQNSVDAIDEAINS GITDKCEAKIDIEINKNNSKITIKDNGTGISSKNAVKKLLDIGNSTKNPESTIGFRGI GRLAGLSYCQKLKFVTSYKGEDKKTIVSFDANKLEKLLIPGEYTDYDLLTVIKEVTKS KKHNEKTDKHYFKVILEEVNNIDHILDYNRIKNYLSQVAPIPFDEQKFPWAKDIKNKL DLKGILLDEYNVILSDGNKKEKLFKLNSNEFVADIRKKISDNIKDVEIKFIEDDFNNL IAFLWYTKSNFYGTMVDRKKKGIRLRKGNIQIGDRSTLNKIFKEDRFNGWFQGEVHVF NENLIPNARRDDFEKNLDYTQLISQLKEIGNSLSKDIRKMSKERNNLKKKKQLYKKFD YLNDKIEKVSDFKILDLVDDLSQKEKEVLNKVFKIVDDNYEQEKVDEFVKNIVENF" misc_feature 710154..>710405 /locus_tag="Acear_0652" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cl00075" /db_xref="CDD:193644" gene 711611..712741 /locus_tag="Acear_0653" /db_xref="GeneID:9512675" CDS 711611..712741 /locus_tag="Acear_0653" /note="InterPro IPR002559:IPR012337; KEGG: bth:BT_2222 transposase; PFAM: transposase IS4 family protein; SPTR: B7AMN0 Putative uncharacterized protein; PFAM: transposase DDE domain" /codon_start=1 /transl_table=11 /product="transposase IS4 family protein" /protein_id="YP_003827259.1" /db_xref="GI:302391439" /db_xref="GeneID:9512675" /translation="MNNCTMLLNKLLEVIDINFLDKVVDKYNADYKVHKLTTKVHLLY LLYFHLTEKKSLADFVVNLKVDSNLKKELPQISVSQLSRKNENRSYQIFADIFSHLFD KLKNKQGFKETIKDIGSIKIIDSSIISLCLSLFAWAKFRKSKGGIKLHTLYDAESGAP ENIIVTNAIVHDKEIFDNLTFDSGCTYIFNRAYIDYQKFDYFIENDIYFVTRTKSNTK IEVVRTLEPTKDDKKANILLDADVILGSTDKRMKHELRLIKVKTIDRQGNEKEIKIIT NRFDLPAHQIAQLYKERWEIELFFKWIKQHLKIKRFFGHNKNAVLIQIYSAVILYLLL KLIKKKAKFNGSLLNLTRRIKYSILTIVPDAFNWKDWCYSFS" misc_feature <712127..712597 /locus_tag="Acear_0653" /note="FOG: Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG3385" /db_xref="CDD:33192" gene complement(713670..714065) /locus_tag="Acear_0654" /db_xref="GeneID:9512676" CDS complement(713670..714065) /locus_tag="Acear_0654" /note="InterPro IPR001387:IPR010982; KEGG: tpd:Teth39_2244 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: B7R6E3 Helix-turn-helix domain protein; PFAM: Helix-turn-helix" /codon_start=1 /transl_table=11 /product="XRE family transcriptional regulator" /protein_id="YP_003827260.1" /db_xref="GI:302391440" /db_xref="GeneID:9512676" /translation="MNFSQRLKQLRKEKGLTLEKLADEFDRSKTTFSNYENNHRKPDI DLTIELAEYFNVSIDYLLGNTEEKRTADEIKEVISENQELFKLWEIISDRKDLQLLLQ QVKNFDSKSINNFINIINIIKKEQQDYSE" misc_feature complement(713883..714056) /locus_tag="Acear_0654" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cd00093" /db_xref="CDD:28977" misc_feature complement(order(713955..713957,714030..714032, 714042..714044)) /locus_tag="Acear_0654" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28977" misc_feature complement(order(713958..713960,714033..714035)) /locus_tag="Acear_0654" /note="salt bridge; other site" /db_xref="CDD:28977" misc_feature complement(order(713952..713957,713967..713969, 713976..713978,714009..714014)) /locus_tag="Acear_0654" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28977" gene 714814..716115 /locus_tag="Acear_0655" /db_xref="GeneID:9512677" CDS 714814..716115 /locus_tag="Acear_0655" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: tex:Teth514_2350 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003827261.1" /db_xref="GI:302391441" /db_xref="GeneID:9512677" /translation="MKLAKYFIHKPNKTQQIVLSCLAYASARLYNIGNYQRKKWSKDS DNDYPDWYKQKKQLKENFWYKNLPSQTAQETLKILADNWDSFYQSIEDYQHNPNKYTG EPNPPNYKPKDSKFNFRYLNNGFKIIDGKLRLSIPKQLKKYLKEEYSITNKFLWIRVP NELLSSNRDVLNSTTRIEFKPLSDDTYKVILTYKVDTPTIKEDNGNYLSIDLGINNLM TCYSNQNQESFIIDGGQYLTINRYFDKEIKHYQSIVNGQGKKTSKRIQNLYKKRRKQL FHLIHSATKKVVNYCVENNISRVIVGDIKNIRDNADLGKQTNQKLHKLPFDIIYHQLE YKLNLQGITLIKKSEKYTSQCSPYSKKVTKKYADKSNRIKRGLYVDKNNNQAFNADSV GSFNILRKYLQQRRKGKDITLQVKGLSNPVKYSWNDHQFAA" misc_feature 714814..716019 /locus_tag="Acear_0655" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature 715000..715737 /locus_tag="Acear_0655" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature 715627..715872 /locus_tag="Acear_0655" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature 715789..716013 /locus_tag="Acear_0655" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 716285..716497 /locus_tag="Acear_0656" /pseudo /db_xref="GeneID:9512678" gene 716775..717929 /locus_tag="Acear_0657" /db_xref="GeneID:9512679" CDS 716775..717929 /locus_tag="Acear_0657" /note="InterPro IPR020683:IPR002110; KEGG: hor:Hore_14960 ankyrin; PFAM: ankyrin; SPTR: B8CY76 ankyrin; PFAM: ankyrin repeat" /codon_start=1 /transl_table=11 /product="ankyrin" /protein_id="YP_003827262.1" /db_xref="GI:302391442" /db_xref="GeneID:9512679" /translation="MPVLFCKINLMEYYEIFGSIIQKGFHFKSGAEQRKEETSFLKSG PYYRGWIPTGGESIPIEELGAARGDTAIDNILVVWLAEDLRDNQTKIIGWHEQAKVYR DYINAPDRLYNIEARREDTTFLPLTDWDFTVSLVTDWEQERRGRGCWYSVGGNKDLVR EIKDYIADYKKTNQVQYIDDRLNDIERIWRLEQMLEKNYSLPEIKFLVESGIDLNRRL EDKYTLLMVAAQCNDDPEIITSLVNNGAHIQVVDKYGETALIKAAGWTDNPEVVDRLI FHGARIDYSAGECGYTPLIIAAARNSNPEVTAELVKQGADIDQTTDFGFTPLMAAVKN NSNPKVAEKLLDSGVDVGDKINGQTVADFAEKDILLRNSDVYFNNINMQA" misc_feature 717417..717809 /locus_tag="Acear_0657" /note="ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other...; Region: ANK; cd00204" /db_xref="CDD:29261" misc_feature 717549..717836 /locus_tag="Acear_0657" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" gene complement(717951..718427) /locus_tag="Acear_0658" /db_xref="GeneID:9512680" CDS complement(717951..718427) /locus_tag="Acear_0658" /note="COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: hor:Hore_03840 hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; SPTR: B8D1R6 Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease; PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease" /codon_start=1 /transl_table=11 /product="hydrogenase maturation protease" /protein_id="YP_003827263.1" /db_xref="GI:302391443" /db_xref="GeneID:9512680" /translation="MKPKSKLTVIGMGSLIKSDDGIGIQILRKLKENEELKEVPLLEV GTSPMNYLEKISNSKIIIGIDAVYGGEGPGSIYRFTLDEIERKGETRKDAHGFSLPDV IELARARTGFPIEVIIYGIEPLDLSLNIQLSSPVKKALPKAVTEIKKEIKQISSAG" misc_feature complement(717975..718418) /locus_tag="Acear_0658" /note="coenzyme F420-reducing hydrogenase delta subunit (putative coenzyme F420 hydrogenase processing subunit); Region: frhD; TIGR00130" /db_xref="CDD:161726" misc_feature complement(717987..718403) /locus_tag="Acear_0658" /note="Hydrogenase specific C-terminal endopeptidases, also called Hydrogen Maturation Proteases (H2MP). These enzymes belong to the peptidase family M52. Maturation of [FeNi] hydrogenases includes formation of the nickel metallocenter, proteolytic processing...; Region: H2MP; cd00518" /db_xref="CDD:99872" misc_feature complement(order(718143..718145,718233..718235, 718368..718370)) /locus_tag="Acear_0658" /note="nickel binding site [ion binding]; other site" /db_xref="CDD:99872" gene 718497..719474 /locus_tag="Acear_0659" /db_xref="GeneID:9512681" CDS 718497..719474 /locus_tag="Acear_0659" /EC_number="1.12.99.6" /note="COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR001821; KEGG: hor:Hore_03850 hydrogenase (NiFe) small subunit HydA; PRIAM: Hydrogenase (acceptor); SPTR: B8D1R7 Hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA)" /codon_start=1 /transl_table=11 /product="hydrogenase (NiFe) small subunit HydA" /protein_id="YP_003827264.1" /db_xref="GI:302391444" /db_xref="GeneID:9512681" /translation="MEQEEFVDLCQKLKSAEDYTLSQEVLSAVNEYQTDNREKLPVVW LETNDSGDNNISVMNTTYPYLGQVFEDLIDLLYSNTFMAAQGPDAFAVLQRAARELAG EFVLVIEGAVPIKDDGLYSVVVTTDEERITALEAVNWLGRLAREVVAIGTCASFGGAS AAKPNVSGSVPVSEVLDRQVINVSGCPVNPDWFVGTLAHLLMYGRPELDDLGRPLLFY GFTVHRHCQRRSYFDAGVFAEKLGDIECMFSQGCVGPRTGADCPYRQWVNHVSWPVKA NTPCIGCTTQEFPDGSSPFFVPLPDKNNQERERREEGTAADQRGEIDYD" misc_feature 718668..719096 /locus_tag="Acear_0659" /note="NADH ubiquinone oxidoreductase, 20 Kd subunit; Region: Oxidored_q6; cl00419" /db_xref="CDD:193811" gene 719467..720888 /locus_tag="Acear_0660" /db_xref="GeneID:9512682" CDS 719467..720888 /locus_tag="Acear_0660" /note="COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194:IPR001501; KEGG: hor:Hore_03860 nickel-dependent hydrogenase large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: B8D1R8 Nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase" /codon_start=1 /transl_table=11 /product="nickel-dependent hydrogenase large subunit" /protein_id="YP_003827265.1" /db_xref="GI:302391445" /db_xref="GeneID:9512682" /translation="MTREEINFSPVTRLSGLLSVDVIMDNLQVVEADVKGNMFRGYEE IMGGRQVRDAVYMTQRVCGICSLAHGAAGSYLLDELYGNEISETAQYLRNIMYGADFL QNHIRHFYLFSLPDFVDLPNEPPFQDQNLTDARLNPEENQRLIEHYYDAIEASQESHQ ILALFGGKAPEQHSFLDGGVAVAPTVDKINQARALVDDIYEFVTGAMLPDTQLIADVY NDYFDIGVTPKRLLSFGLFRFGPRNEELLWKGGILEDNSLTPPELDLIEETVINSWFE DEDGDGEVEPNPYKPYAYSWIKTVQYGGEFFETGPLARMLINGFYEGGTSTMDRILAR TIETVKIVALMKKWLERLNLQSEAPINQNQTPVKSEADGITGAMRGGLLHSASIQDEE VVEYDIITPTVWNFAPKDRFGSRGPVENAIVGTEIPREDEIYTVLGRIIRSFDPCISC GTHVLDSQGNLQGKKIFGLQMGD" misc_feature 719482..720846 /locus_tag="Acear_0660" /note="Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Region: Complex1_49kDa; cl00417" /db_xref="CDD:193809" gene 720890..721132 /locus_tag="Acear_0661" /db_xref="GeneID:9512683" CDS 720890..721132 /locus_tag="Acear_0661" /note="COGs: COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); InterPro IPR000688; KEGG: hor:Hore_03870 hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; SPTR: B8D1R9 Hydrogenase nickel insertion protein HypA; PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA" /codon_start=1 /transl_table=11 /product="hydrogenase expression/synthesis HypA" /protein_id="YP_003827266.1" /db_xref="GI:302391446" /db_xref="GeneID:9512683" /translation="MHEMSVVGHLFEIITDYVAEYELEEINRVVVRVGKLTCIEESAF QFAFDVCAEGTAAEEAELVINRVKGDELLLDKLEGS" misc_feature 720890..>721096 /locus_tag="Acear_0661" /note="Hydrogenase expression/synthesis hypA family; Region: HypA; cl00418" /db_xref="CDD:193810" gene 721134..721805 /locus_tag="Acear_0662" /db_xref="GeneID:9512684" CDS 721134..721805 /locus_tag="Acear_0662" /note="COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR012202:IPR003495:IPR004392; KEGG: hor:Hore_03880 hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; SPTR: C6PTB3 Hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: urease accessory protein UreG; hydrogenase accessory protein HypB" /codon_start=1 /transl_table=11 /product="hydrogenase accessory protein HypB" /protein_id="YP_003827267.1" /db_xref="GI:302391447" /db_xref="GeneID:9512684" /translation="MELIEVKEDILHKNDELAANNRKLLNNHGVFTINLVGSPGAGKT ALLEELIARLKDKIQIGVIEGDLYTTKDAARIEAYDIPVIQVNTGGACHLEAAMIREA LNELDLAELDLLVIENVGNLVCTASFDLSEDLKITVLSVTEGSDKPRKYPIIFRKSDL LVVNKLDLLEYTDFSLADLYVDVKALNDELESFEISCKDGSGIAKFCNYLFTQVQQVK LARSN" misc_feature 721158..721775 /locus_tag="Acear_0662" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" gene 721807..724077 /locus_tag="Acear_0663" /db_xref="GeneID:9512685" CDS 721807..724077 /locus_tag="Acear_0663" /note="COGs: COG0068 Hydrogenase maturation factor; InterProIPR004421:IPR017968:IPR017945:IPR001792:IPR 011125:IPR006070; KEGG: hor:Hore_03890 (NiFe) hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; SPTR: B8D1S1 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF" /codon_start=1 /transl_table=11 /product="(NiFe) hydrogenase maturation protein HypF" /protein_id="YP_003827268.1" /db_xref="GI:302391448" /db_xref="GeneID:9512685" /translation="MVNQRKLIQVQGVVQGVGFRPFIYKLAKKHGLNGRVSNTSRGVE IDIEGGKKNITDFISAVKDQPPRLAKIEKITTEDLPAGKYKNFQIATSKSEDDTLTLI SPDVSLCRKCKAEILEVNNRRYKYPFTNCTNCGPRFSIIKDLPYDRRQTTMEPFKMCP ECRAEYHNPEDRRFHAQPNACPDCGPEVWLTDNEGNEFEVEQPLEESGRLLRQGQIIA VKGLSGFHLICDGTNQQAVVRLRRNKSRPNKPLAVMMDRIETVKEYCQVSKLEADILQ GIRKPILLLEKKGSRLPFNIAPNNNSLGVMLPYTPLHCLLFSDQLQILVVTSANQSSL PLEYKNQSALENLREITDYFLLHNREIHLPIDDSVVEVMAGKERIVRRSRGYTPQPIE ISELADKDTLAYGAHFKNTFSISKGRLIFLSQHIGDLDNLETYQRFKRVLNHFKEIYE IEPKIIAYDLHPDYPVSKFGQHEVGKKAAVQHHHAHIVSCLAENGVNKRVIGVAFDGT GWGTDNRIWGGEFLLCDYNDFQRVGRLNYVQLPGGDRAVKAPWRMAVSYLFNTYGEEL DCYLSDNLAEKELRYIINILKHRINSPQTSSMGRLFAAVSALIGQRESITYQGQAAVE LEAVAAKEAMESYAYEIEDRKEGYVINTDKIIRGIVTDLKQGTAKQVIAGRFHATVIG FSLEVCSLLRDRYNINRVALSGGVFQNEIIFTGLYNRLIKAGFEVYTHSRVPCNDGGL SLGQLVIANNQERSQT" misc_feature 721807..722073 /locus_tag="Acear_0663" /note="Acylphosphatase; Region: Acylphosphatase; cl00551" /db_xref="CDD:193864" misc_feature 721861..724056 /locus_tag="Acear_0663" /note="Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]; Region: HypF; COG0068" /db_xref="CDD:30417" misc_feature 722128..722232 /locus_tag="Acear_0663" /note="HypF finger; Region: zf-HYPF; pfam07503" /db_xref="CDD:191760" misc_feature 722278..722382 /locus_tag="Acear_0663" /note="HypF finger; Region: zf-HYPF; pfam07503" /db_xref="CDD:191760" misc_feature 722431..722955 /locus_tag="Acear_0663" /note="yrdC domain; Region: Sua5_yciO_yrdC; cl00305" /db_xref="CDD:185891" gene 724077..724295 /locus_tag="Acear_0664" /db_xref="GeneID:9512686" CDS 724077..724295 /locus_tag="Acear_0664" /note="COGs: COG0298 Hydrogenase maturation factor; InterPro IPR001109; KEGG: hor:Hore_03900 hydrogenase assembly chaperone HypC/HupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); SPTR: B8D1S2 Hydrogenase assembly chaperone hypC/hupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF" /codon_start=1 /transl_table=11 /product="hydrogenase assembly chaperone hypC/hupF" /protein_id="YP_003827269.1" /db_xref="GI:302391449" /db_xref="GeneID:9512686" /translation="MCIAVPVEIIEVSGSTAVAELDGVRKRINVELVSEIEVGNYVLL HSGCAIEKIDQKQAEDTLKLLRSLAVDR" misc_feature 724077..724274 /locus_tag="Acear_0664" /note="HupF/HypC family; Region: HupF_HypC; cl00394" /db_xref="CDD:193800" gene 724314..725393 /locus_tag="Acear_0665" /db_xref="GeneID:9512687" CDS 724314..725393 /locus_tag="Acear_0665" /note="COGs: COG0409 Hydrogenase maturation factor; InterPro IPR002780; KEGG: hor:Hore_03910 hydrogenase formation HypD protein; PFAM: hydrogenase formation HypD protein; SPTR: B8D1S3 Hydrogenase formation HypD protein; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD" /codon_start=1 /transl_table=11 /product="hydrogenase expression/formation protein HypD" /protein_id="YP_003827270.1" /db_xref="GI:302391450" /db_xref="GeneID:9512687" /translation="MEYIDKFRDPELVRGLLKRITAKVDSRVRIMEVCGTHTRAILKS GIKNLLSDNIELISGPGCPICVTSSGYIDAAVKLASKEEVIVATFGDMMRVPGNEISL HQAKASGCDIRVVYSPLDTVELAQQNPDSEVVFLALGFETTAPTIALNINQAAKLELQ NYSILSSLKTMPGVMEKLAASDELNLDGFICPGHVSTIIGAEPFEFLAYQYNLPAVIA GFEPGDILLGLYQLLEMEAAGISRLKNQYSRVVKYRGNRQAIDRIYNIFTRTDAFWRG MGSIEDSGLRLKDEYRQFSARDKFGIQISNRKKPEGCICGEILRGIKKPVDCELFADS CTPESPIGPCMVSSEGACAAYYQYQ" misc_feature 724314..725390 /locus_tag="Acear_0665" /note="Hydrogenase formation hypA family; Region: HypD; cl12072" /db_xref="CDD:196328" misc_feature 724314..725390 /locus_tag="Acear_0665" /note="Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]; Region: HypD; COG0409" /db_xref="CDD:30758" gene 725403..726413 /locus_tag="Acear_0666" /db_xref="GeneID:9512688" CDS 725403..726413 /locus_tag="Acear_0666" /note="COGs: COG0309 Hydrogenase maturation factor; InterPro IPR011854:IPR000728:IPR010918:IPR016188; KEGG: hor:Hore_03920 hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; SPTR: B8D1S4 Hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE" /codon_start=1 /transl_table=11 /product="hydrogenase expression/formation protein HypE" /protein_id="YP_003827271.1" /db_xref="GI:302391451" /db_xref="GeneID:9512688" /translation="MKIISVITLAHGNGGRLTHDLIDNLFYKYFGNDILAQKGDSALI PPVSGQVVTTTDSFVVNPIFFTGGDIGKLAVTGTVNDLVMSGAKPLYLTVGLIIEEGL QFEKLEAVIESIGRTAEKAEVKVVTGDTKVVEKGSVDQIYINTTGIGRIREEDQLSDE IETGDKVIINGSVGDHGVSIMAQRDELGFESSIKSDCGLLDSLVEDILAESNGVKLLT DPTRGGLATALKEIANQNQVSICLKEERISVKKEVNGICEILGLDPLYLANEGKVIIV ASSDEAERILEIMKRHPQGEQAEVIGTVVEDNGSRLSLETELGGTRVLSMLTNELLPR LC" misc_feature 725439..726314 /locus_tag="Acear_0666" /note="HypE (Hydrogenase expression/formation protein). HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE dehydrates its own carbamoyl moiety in an ATP-dependent process to yield the enzyme thiocyanate. The N-terminal domain of HypE is related to the...; Region: HypE; cd02197" /db_xref="CDD:100033" misc_feature order(725451..725459,725547..725564,725568..725573, 725643..725645,725679..725681,725787..725789, 725793..725795,725802..725804,725808..725810, 725826..725828,725832..725834,726054..726059, 726066..726068) /locus_tag="Acear_0666" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100033" misc_feature 725454..726410 /locus_tag="Acear_0666" /note="hydrogenase expression/formation protein HypE; Region: hypE; TIGR02124" /db_xref="CDD:162715" misc_feature order(725568..725570,725643..725645,726063..726068) /locus_tag="Acear_0666" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:100033" gene 726503..726697 /locus_tag="Acear_0667" /db_xref="GeneID:9512689" CDS 726503..726697 /locus_tag="Acear_0667" /note="KEGG: hor:Hore_03010 hypothetical protein; SPTR: B8D1I5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827272.1" /db_xref="GI:302391452" /db_xref="GeneID:9512689" /translation="MECKVEKNKEHCNCTYSPCPRKGNCCECIQYHQKKDQLPACFFP DEVEKTYDRSIERFIACHSE" gene 726712..727269 /locus_tag="Acear_0668" /db_xref="GeneID:9512690" CDS 726712..727269 /locus_tag="Acear_0668" /note="COGs: COG1514 2'-5' RNA ligase; InterPro IPR014051:IPR009097:IPR004175; KEGG: tsi:TSIB_1140 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; SPTR: C6A3J9 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase" /codon_start=1 /transl_table=11 /product="2'-5' RNA ligase" /protein_id="YP_003827273.1" /db_xref="GI:302391453" /db_xref="GeneID:9512690" /translation="MRSFIAVDLANEEVKDKLVEIQKEIKALHSGKIKLVKPENLHLT LKFLGEIEDTEVEELEEMLEGFKEYSQQEINVSELGVFPHYGYMKVIWAGLKENETLK QIKSELEDKSAELGFDRDTKDFHPHITIGRVKNIWAKDKLVNKLKEFVDQDFGKLKLD KLKLKKSTLTSDGPVYETISEVELN" misc_feature 726712..727263 /locus_tag="Acear_0668" /note="2'-5' RNA ligase; Region: 2_5_ligase; TIGR02258" /db_xref="CDD:162789" misc_feature 726742..726987 /locus_tag="Acear_0668" /note="2',5' RNA ligase family; Region: 2_5_RNA_ligase; pfam02834" /db_xref="CDD:190445" misc_feature 727006..>727158 /locus_tag="Acear_0668" /note="2',5' RNA ligase family; Region: 2_5_RNA_ligase; pfam02834" /db_xref="CDD:190445" gene 727347..729116 /locus_tag="Acear_0669" /db_xref="GeneID:9512691" CDS 727347..729116 /locus_tag="Acear_0669" /note="COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR017871:IPR001140:IPR003439:IPR017940:IPR 003593:IPR011527; KEGG: dae:Dtox_0544 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: C1TE83 ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003827274.1" /db_xref="GI:302391454" /db_xref="GeneID:9512691" /translation="MQKSTLKRGLQLLSYAGNYGWAVVGVVISVLMSTVFVLLPPWLI RYGIDNLIIGEKPEFLWLLGLALVGITLLKGVVDFAKRYGAEYIAQRIIHDVRSQLYD HLNQLSFSFYDSARTGDIMSRITADTDALRKFLSKVSVYVSGNILTIIGILAVMIFWN LQLALLYLIMVPLMVYGMFKYSTQVRPMFRRVRCKFSNLTEIIQEDLNGIESIKLFGQ EKKEKEDFIQENQEYVNTRIETAQTSALWMPYVNFLVGLGSSLVIWYGGRLVISGEIS FGMLVGFISYIAMLLRPVRQTGMMINSATQAAAAAERIFDILQMEPEIQEVDNAYELP PVDGRVEYRDVSFSYQQDEEVLTGINLTAKPGQLIAIVGPSGAGKSTLLHLLPRFYDP DQGEILIDGHNIKELTIGSLRSQIGIVLQDTFLFAASIKDNISYGRPEASMEEIIEAA KIAQINDYIQSLPLGYETPVGEEGVNLSGGQKQRLAMARVLLTDPQLLLLDEPTSSLD AETEEQMQQALSEVIKGRTTFIIAHRLWTVERADQILVIDNGRIVEQGSHEELVSADR LYSQLYSRSLSDRLISETAGDKR" misc_feature 727353..729038 /locus_tag="Acear_0669" /note="ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:31327" misc_feature <727593..728228 /locus_tag="Acear_0669" /note="ABC transporter transmembrane region; Region: ABC_membrane; cl00549" /db_xref="CDD:193863" misc_feature 728364..729038 /locus_tag="Acear_0669" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 728463..728486 /locus_tag="Acear_0669" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(728472..728477,728481..728489,728607..728609, 728847..728852,728943..728945) /locus_tag="Acear_0669" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 728598..728609 /locus_tag="Acear_0669" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 728775..728804 /locus_tag="Acear_0669" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 728835..728852 /locus_tag="Acear_0669" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 728859..728870 /locus_tag="Acear_0669" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 728931..728951 /locus_tag="Acear_0669" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene 729140..730903 /locus_tag="Acear_0670" /db_xref="GeneID:9512692" CDS 729140..730903 /locus_tag="Acear_0670" /note="COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR017871:IPR001140:IPR003439:IPR017940:IPR 003593:IPR011527; KEGG: dae:Dtox_0545 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: C1TE84 ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003827275.1" /db_xref="GI:302391455" /db_xref="GeneID:9512692" /translation="MSDEEDDFQLSELNWKLFRFLFSYLKPYSKRLLLASIAMLMVTV TTLAGPYLSKLAVDDYIMVGDLAGLNRIFILMIISYGVLWFSSYWQRYLASWVGQQIV GKIRKDFYSKLQRLSIDFFYQQRKGDIISRLTHDVNALSDLLTTGFINLLNDFFTLSG IVVIMLLLNLKLALVSFITIPVILFVVSYLGKKMRRAYRDVRQKLAQLNADVEESISN IRIVQALNREAVNTGEFKKLSWKNLKANLKAVSILAVLFPTISLSKVLGEVLVLWYGG WGVVKGSITLGVVVAFLGYVRRFFAPLANLSQVYNTYQSAGAALERIYEYILLEPEIK EPAEPLVPEGGFSGEIDFVDVDFAYDQEPVIKGFNLHLDSGDNFALVGKTGAGKTTVI NLLTRLYDVDSGEILLDGIDLRKISFESLREVIGVVSQNVFLFNTSIKENIKYGNPKV TEKEVIKAAQKVHAHDFITGLPEGYETEVGEKGVKLSGGQKQLISFARTLLADPQILI LDEATSSVDAYTEMLIQQALDELLAGRTAIMIAHRFSTLKKAEKIGVLEEGRLTSVGS HQEVLEENSTYQELYQKQLIK" misc_feature 729182..730891 /locus_tag="Acear_0670" /note="ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:31327" misc_feature 729233..730048 /locus_tag="Acear_0670" /note="ABC transporter transmembrane region; Region: ABC_membrane; cl00549" /db_xref="CDD:193863" misc_feature 730187..730882 /locus_tag="Acear_0670" /note="MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic...; Region: ABCC_MsbA; cd03251" /db_xref="CDD:73010" misc_feature 730283..730306 /locus_tag="Acear_0670" /note="Walker A/P-loop; other site" /db_xref="CDD:73010" misc_feature order(730292..730297,730301..730309,730427..730429, 730667..730672,730763..730765) /locus_tag="Acear_0670" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73010" misc_feature 730418..730429 /locus_tag="Acear_0670" /note="Q-loop/lid; other site" /db_xref="CDD:73010" misc_feature 730595..730624 /locus_tag="Acear_0670" /note="ABC transporter signature motif; other site" /db_xref="CDD:73010" misc_feature 730655..730672 /locus_tag="Acear_0670" /note="Walker B; other site" /db_xref="CDD:73010" misc_feature 730679..730690 /locus_tag="Acear_0670" /note="D-loop; other site" /db_xref="CDD:73010" misc_feature 730751..730771 /locus_tag="Acear_0670" /note="H-loop/switch region; other site" /db_xref="CDD:73010" gene 731001..731480 /locus_tag="Acear_0671" /db_xref="GeneID:9512693" CDS 731001..731480 /locus_tag="Acear_0671" /note="KEGG: hor:Hore_14720 hypothetical protein; SPTR: B8CY52 Putative uncharacterized protein; PFAM: Predicted permease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827276.1" /db_xref="GI:302391456" /db_xref="GeneID:9512693" /translation="MFYVVISVLIIILFIKDREKTVTGVKKGIKKLIKNLPAFLNMMI LVAISLYFVSDEVLVAYLGQDSGISGLFLASFLGSITLMPGFIAFPLSGLLLEKGVSY TVIALFTTTLMMVGVLTYPVEKEFFGRKVTIIRNSLSLLIALIVSLLVGLFYGEVMI" gene 731480..732004 /locus_tag="Acear_0672" /db_xref="GeneID:9512694" CDS 731480..732004 /locus_tag="Acear_0672" /note="KEGG: hor:Hore_14710 hypothetical protein; SPTR: B8CY51 Putative uncharacterized protein; PFAM: Predicted permease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827277.1" /db_xref="GI:302391457" /db_xref="GeneID:9512694" /translation="MLQMLKRYLLTIIFFTFVSGSFLFGYSPGEEIYFNFFDFLLTML KFLPAVFILIGLFDVWVDREVIEKHLGDNSSVSSYFWAILLAGTTVGGLYITFPVAHA MWKKGASLRIIFTYIGAAAICRIPMTLFEASYVGTKFTLIRLLVSVPLVILTSILLEK YLNQKDYELKNNLS" misc_feature 731597..>731986 /locus_tag="Acear_0672" /note="Predicted permease; Region: DUF318; cl00487" /db_xref="CDD:119868" gene 732068..732382 /locus_tag="Acear_0673" /db_xref="GeneID:9512695" CDS 732068..732382 /locus_tag="Acear_0673" /note="InterPro IPR001845:IPR011991; KEGG: dsy:DSY3213 hypothetical protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Q24SJ0 Putative uncharacterized protein; PFAM: Bacterial regulatory protein, arsR family" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="YP_003827278.1" /db_xref="GI:302391458" /db_xref="GeneID:9512695" /translation="MIILQDLLVGLKAIADEKRLKLVNLLLKQDYCVGALAKELEISK SAVSQHLKVLRESELVIGEKRGYWVHYSVQEDKLIELADGLKGLITESKSQSTGCCHH SD" misc_feature 732098..732304 /locus_tag="Acear_0673" /note="Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to...; Region: HTH_ARSR; cd00090" /db_xref="CDD:28974" misc_feature order(732098..732103,732107..732109,732116..732118, 732125..732130,732137..732142,732149..732151, 732239..732241,732299..732304) /locus_tag="Acear_0673" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:28974" misc_feature order(732101..732106,732116..732124,732161..732169, 732194..732205,732209..732214,732221..732226, 732230..732235,732251..732259,732272..732280) /locus_tag="Acear_0673" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28974" misc_feature order(732161..732163,732170..732172,732299..732301) /locus_tag="Acear_0673" /note="putative Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28974" gene complement(732391..733713) /locus_tag="Acear_0674" /db_xref="GeneID:9512696" CDS complement(732391..733713) /locus_tag="Acear_0674" /note="COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: ate:Athe_0312 LmbE family protein; PFAM: LmbE family protein; SPTR: B9MMZ6 LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase" /codon_start=1 /transl_table=11 /product="LmbE family protein" /protein_id="YP_003827279.1" /db_xref="GI:302391459" /db_xref="GeneID:9512696" /translation="MEGITLNKTSDQIMILAPHCDDELLSCGGLIQEAVAKNIESRVV FLTNGDSFRWAAVRNFRRPFLSHQKFQEFGKLRQQEAINALKQLGLSKESIYFLGYPD RGLEFLWSDYWHNENTYFSRYTGSMTNPYDLTYKPARPYTGKNLVEDLTEILSTEKPT KIFISSPFDDHADHWAAYNFLHYALAKLKLDNKLAVDPAIYQYLTHKGSWPISNREDI LPPSELNNDVINWSRFNLNSSQQTTKLTALKEYKSQLKVTKKYLFSFITNNEIFIVDD IRQLELPASNPIESKILAYKEPTANTKKRRRRPGGDIKRIELSLQQPDQLNVKLITKS KCSPRYSFRIKLYILLSSRVKKQREIIDFTITPVKDANSASIKILPTKADQLSCKRVE TKDKQNIIEAIIGTPPLKRKGYLFFQAKSYFKKKVLDSTAWKVVNLIL" misc_feature complement(733195..733674) /locus_tag="Acear_0674" /note="GlcNAc-PI de-N-acetylase; Region: PIG-L; cl00929" /db_xref="CDD:193977" gene complement(733743..734537) /locus_tag="Acear_0675" /db_xref="GeneID:9512697" CDS complement(733743..734537) /locus_tag="Acear_0675" /note="COGs: COG0223 methionyl-tRNA formyltransferase; InterPro IPR002376; KEGG: gme:Gmet_2025 formyl transferase-like; PFAM: formyl transferase domain protein; SPTR: Q39U20 Formyl transferase-like; PFAM: Formyl transferase" /codon_start=1 /transl_table=11 /product="formyl transferase domain protein" /protein_id="YP_003827280.1" /db_xref="GI:302391460" /db_xref="GeneID:9512697" /translation="MKIIIVTQHDPFYLPLLFKKFFKFYIQHQNKIEIEGIVIQQPLG RSSIWNLLKQLYNFYGPIDFSKQALRYLKKQLNYLRYRVGLKDNFLSIPALAKKYNIE VLSYSDINSQEFIDFITDNQIDLVVSASATQIFKEQILTAPKYGCINIHSAPLPRYRG MMPNFWQMYHGEEYSVLTIHRMITKLDKGDIIMQKKTKIKSDMTLDDLVCQTKIKAAE ALGEVLLKFFNNEVEFRPLPDIEGSYFSFPTKKDVEKFKAKGKRLI" misc_feature complement(733806..734351) /locus_tag="Acear_0675" /note="Formyltransferase, catalytic core domain; Region: FMT_core; cl00395" /db_xref="CDD:187897" misc_feature complement(order(733890..733892,734082..734084, 734088..734090,734148..734153,734346..734351)) /locus_tag="Acear_0675" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187712" misc_feature complement(order(733977..733982,733989..733994, 733998..734000,734058..734060,734082..734093, 734118..734120,734133..734156,734343..734351)) /locus_tag="Acear_0675" /note="active site" /db_xref="CDD:187712" misc_feature complement(order(733977..733982,733989..733994, 734091..734093,734118..734120,734133..734141, 734145..734147,734154..734156)) /locus_tag="Acear_0675" /note="cosubstrate binding site; other site" /db_xref="CDD:187712" misc_feature complement(order(733977..733979,734085..734087, 734091..734093)) /locus_tag="Acear_0675" /note="catalytic site [active]" /db_xref="CDD:187712" gene 734888..736828 /locus_tag="Acear_0676" /db_xref="GeneID:9512698" CDS 734888..736828 /locus_tag="Acear_0676" /note="COGs: COG1297 membrane protein; InterPro IPR004813:IPR004814; KEGG: hor:Hore_11130 oligopeptide transporter, OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; SPTR: B8CX47 Oligopeptide transporter, OPT family; TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: OPT oligopeptide transporter protein; TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter, OPT family" /codon_start=1 /transl_table=11 /product="oligopeptide transporter, OPT family" /protein_id="YP_003827281.1" /db_xref="GI:302391461" /db_xref="GeneID:9512698" /translation="MSQQEITEETNEKPEPYVAADKSMAEFTPKAIILGVIMTVVFAA ANAYLGLKVGMTVSASVPAAVISMGILRGVLDQGTILENNTVQTITSAGTSLAAGVIF TVPALILWGVDPSMIKIFFLSLFGGVLGVLFMIPLRKFLIVDEHENLPYPEGTACGEV LIAGEEGGAKSKYVFTGMGIGAIYKLFSGGMKIWKDAVEWAIPGYKGAAIGFDLYPSL LGVGYIIGPKIAVRMLAGGTLGWLVFMPLIAKVGGGLSQPLFPASQPIAELGYWGIWD NYIRYVGAGGVALGGVVSLIKALPTIVESFKAAMGELTTGLAKDAKKVRTNLDLSIKW VGLGALAVILAIAFVPQVPVGILGAAIVTIFGFFFVTVSSRIVGIVGSSSNPASGMTI ATLLATSLIMKAVGWTDKTGMIAALSVGAIVCIAVAVAGDTSQDLKTGFLVGATPKKQ QIGELIGILISAIFVGGIVLMLHQAYGIATKQLPAPQANLMSMVVKGVMKGNLPWALV FTGVFSALVIEMFGIGSLPFAVGLYLPIHLSTPIMIGGLIKLALDKKSISKEARKDKN ESGVLFASGLVAGDALVGILLSALALKGWHTAIQVGSGWAGSAANIIALGTFAVLAYI LWRNSVGATLREEHKDSTNITG" misc_feature 734933..736681 /locus_tag="Acear_0676" /note="OPT oligopeptide transporter protein; Region: OPT; cl14607" /db_xref="CDD:196791" gene 736832..736924 /locus_tag="Acear_0677" /db_xref="GeneID:9512699" CDS 736832..736924 /locus_tag="Acear_0677" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827282.1" /db_xref="GI:302391462" /db_xref="GeneID:9512699" /translation="MKTNQAPHKNKGSLVDFLIKNESREEDKNE" gene 736917..737873 /locus_tag="Acear_0678" /db_xref="GeneID:9512700" CDS 736917..737873 /locus_tag="Acear_0678" /note="COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); KEGG: hor:Hore_11100 leucyl aminopeptidase (aminopeptidase T); SPTR: B8CX44 Leucyl aminopeptidase (Aminopeptidase T); PFAM: Thermophilic metalloprotease (M29)" /codon_start=1 /transl_table=11 /product="leucyl aminopeptidase (aminopeptidase T)" /protein_id="YP_003827283.1" /db_xref="GI:302391463" /db_xref="GeneID:9512700" /translation="MNNLKEAAEIIINDCMSVKDDETTLVIVDKPLRKIGQAIFAAAK EAANEAVLTEIAPRANHGAEPPASIANLMQEFDVVIMPTSKSLSHTKARKAANDAGAR AATLPDITEEIMIRTLTADYEAIKERSEKVAEILDEGKKAHLITEAGTDLKMSLVERS GHPDTGIYHQAGNFGNLPAGEAYIAPLEETAEGKVVIDGAMSGLGVLEEPVTLIVEDG YVVDIQGGKEAAELTELVDQYGKEARNIAELGIGTNDQAILTGNVLEDEKVMSTVHVA IGDNSAFGGKIEIESHLDGIINQPTLKVDDRVIMKEGEFKIL" misc_feature <737067..737861 /locus_tag="Acear_0678" /note="Leucyl aminopeptidase (aminopeptidase T) [Amino acid transport and metabolism]; Region: AmpS; COG2309" /db_xref="CDD:32463" gene complement(738333..740156) /locus_tag="Acear_0679" /db_xref="GeneID:9512701" CDS complement(738333..740156) /locus_tag="Acear_0679" /note="COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641:IPR016035; KEGG: gwc:GWCH70_1002 patatin; PFAM: patatin; SPTR: A6CN36 patatin-like phospholipase; PFAM: patatin-like phospholipase" /codon_start=1 /transl_table=11 /product="patatin" /protein_id="YP_003827284.1" /db_xref="GI:302391464" /db_xref="GeneID:9512701" /translation="MKSNKFIIISLILIMLLSITQTSIAKNKLKRITVKDDTYLLEDT SKFDNLNQPRIAVALSGGGGRALVHIGVLKALEEEGIPIDMLVGTSMGGIIGTMYGSG MTISEIERVATEAAFSNLFETNFFGTQSLLKTEKVNKFLERLTPVDQLEKFPIPTAFL SCELNTGNKYIHTSGRVSDKIQDAYAIPYYFPIQKQDEFTFIDPGIIESTPAKTARVL GADIVISSTAIGKLPYKNYNTASRSMMRMIELLQEKISRPITEEYSDIIIDNPVADYS FMDFNQAAELISIGYQHTKEKIPKIKSLLNKYDIQLQKIDRKGTINLDRLLTDLKYDR LALDSSLLTPKLYFGKDHSFFKQNLFKDDLFKFQYGLKQQLGQIEATILDNRREDNNL EAKLRVKQLTKTIDLISNIKPGSNDNWELKLKYYTPNYTLSVGRRSIDNREFNLIDNE YTIKINNIKLEGETSVLVSPELDSWKVLTSHQGIFEISSIWSAKPKLVYNTTGLLKSP IIYRGSKPKDNVKLQTAIDLIYTHNFLPTIKLMEILQLTDIEYYLFSDYQTSYDSSHA AGIGANTNLKLLGLKPLDFGIYIAEDDEDGSHFGWNINLIF" misc_feature complement(739197..740009) /locus_tag="Acear_0679" /note="Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]; Region: RssA; COG1752" /db_xref="CDD:31938" misc_feature complement(739479..739994) /locus_tag="Acear_0679" /note="Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1; Region: Pat_PNPLA6_PNPLA7_NTE1_like; cd07205" /db_xref="CDD:132844" misc_feature complement(order(739548..739550,739887..739889, 739962..739964,739968..739973)) /locus_tag="Acear_0679" /note="active site" /db_xref="CDD:132844" misc_feature complement(739881..739895) /locus_tag="Acear_0679" /note="nucleophile elbow; other site" /db_xref="CDD:132844" gene 740879..741634 /locus_tag="Acear_0680" /db_xref="GeneID:9512702" CDS 740879..741634 /locus_tag="Acear_0680" /note="COGs: COG1381 recombinational DNA repair protein (RecF pathway); InterPro IPR003717; KEGG: dae:Dtox_3062 DNA repair protein RecO; PFAM: recombination protein O RecO; SPTR: Q67RZ0 DNA repair protein recO; TIGRFAM: DNA repair protein RecO; PFAM: recombination protein O C terminal; recombination protein O N terminal; TIGRFAM: DNA repair protein RecO" /codon_start=1 /transl_table=11 /product="DNA repair protein RecO" /protein_id="YP_003827285.1" /db_xref="GI:302391465" /db_xref="GeneID:9512702" /translation="MSLYKTEAIVLKYYELKEADKIIVLYTRQHGKVQAVANGARKTK SRLAGSVELFTYSDFLLYQGKSLSTISQTEIINSFASLRDDLFKMAYASYVVEVVNEF TVDEEKNEPLFALLLATLYMLDRGEELELATRFFELRLLNLLGYRPQLDACVDCDLDL AKIDKVKFSSKLGGVVCADCALEDQYAMRINKGTVATMERLLEIDYKKLDRLKVPEST RQQLAKILPNYLQSIIEKKLKSLDFLKTLTMTN" misc_feature 740879..741622 /locus_tag="Acear_0680" /note="DNA repair protein RecO; Reviewed; Region: recO; PRK00085" /db_xref="CDD:178852" misc_feature 740879..741115 /locus_tag="Acear_0680" /note="Recombination protein O N terminal; Region: RecO_N; pfam11967" /db_xref="CDD:152402" misc_feature 741125..741604 /locus_tag="Acear_0680" /note="Recombination protein O C terminal; Region: RecO_C; pfam02565" /db_xref="CDD:145610" gene 741655..742044 /locus_tag="Acear_0681" /db_xref="GeneID:9512703" CDS 741655..742044 /locus_tag="Acear_0681" /note="InterPro IPR000449; KEGG: tte:TTE0977 hypothetical protein; PFAM: ubiquitin-associated- domain-containing protein; SPTR: Q8RB47 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="ubiquitin-associated- domain-containing protein" /protein_id="YP_003827286.1" /db_xref="GI:302391466" /db_xref="GeneID:9512703" /translation="MQDINQQLEKIDLIRERTKASYREAKEALEAADGDVLEAVVRLE EEDLNHKKEFQVAGSKLIEKIKELIKKGNVTKILVKKDGEIIFSLPVTVGVIGTAFYP PLAVLGLAATLVGQYTLEVEYNEPTRK" misc_feature <741679..741792 /locus_tag="Acear_0681" /note="nascent polypeptide-associated complex protein; Reviewed; Region: nac; PRK06369" /db_xref="CDD:180545" gene 742342..743229 /locus_tag="Acear_0682" /db_xref="GeneID:9512704" CDS 742342..743229 /locus_tag="Acear_0682" /EC_number="6.1.1.14" /note="COGs: COG0752 Glycyl-tRNA synthetase alpha subunit; InterPro IPR002310:IPR006194; KEGG: hmo:HM1_2457 glycyl-tRNA synthetase, alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit; PRIAM: glycine--tRNA ligase; SPTR: B0TAF7 Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit" /codon_start=1 /transl_table=11 /product="glycyl-tRNA synthetase alpha chain" /protein_id="YP_003827287.1" /db_xref="GI:302391467" /db_xref="GeneID:9512704" /translation="MNFQDMIHALNEFWAEQKCIIKQPYDIEVGAGTMNPATTLRALG PEDWNVAYVEPCRRPADGRYGENPNRLQHYYQYQVIMKPSPQKIQEIYLDSLEALGID PAKHDIRFVEDNWESPTLGAWGLGWEVWLDGMEITQFTYFQQVGGFDVKPVSVEITYG LERIAVYLQEVDSVFDIEWVDGISYGDVHHQGEVEHSTYNFEVADIDKLLTFFDLYEE EAKQAIEEDLVLPAYDYVLKCSHTFNLLDARGAISVTERTSYIKRVRDLANLCAKAYL EQRERLGYPLMKEGRRENE" misc_feature 742342..743205 /locus_tag="Acear_0682" /note="glycyl-tRNA synthetase, tetrameric type, alpha subunit; Region: glyQ; TIGR00388" /db_xref="CDD:129483" misc_feature 742345..743181 /locus_tag="Acear_0682" /note="Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the...; Region: GlyRS_alpha_core; cd00733" /db_xref="CDD:29812" misc_feature order(742351..742353,742363..742365,742375..742377, 742399..742404,742408..742410,742414..742425, 742471..742473,742498..742500,742510..742512, 742558..742560,742876..742878,742915..742917, 742924..742929,742948..742950,742954..742956, 742963..742965,742972..742977,742984..742989, 742996..742998,743005..743007,743017..743019, 743023..743034,743041..743043,743053..743055) /locus_tag="Acear_0682" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29812" misc_feature 742396..742419 /locus_tag="Acear_0682" /note="motif 1; other site" /db_xref="CDD:29812" misc_feature order(742432..742434,742438..742440,742513..742515, 742561..742563,742567..742569,742573..742581, 742744..742749,742759..742761,742807..742812, 742816..742821,742825..742830) /locus_tag="Acear_0682" /note="active site" /db_xref="CDD:29812" misc_feature 742510..742521 /locus_tag="Acear_0682" /note="motif 2; other site" /db_xref="CDD:29812" misc_feature 742819..742830 /locus_tag="Acear_0682" /note="motif 3; other site" /db_xref="CDD:29812" gene 743222..745306 /locus_tag="Acear_0683" /db_xref="GeneID:9512705" CDS 743222..745306 /locus_tag="Acear_0683" /EC_number="6.1.1.14" /note="COGs: COG0751 Glycyl-tRNA synthetase beta subunit; InterPro IPR002311:IPR008909:IPR006194:IPR015944; KEGG: hmo:HM1_2458 glycyl-tRNA synthetase, beta subunit; PFAM: glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain protein; PRIAM: glycine--tRNA ligase; SPTR: B0TAF8 Glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit" /codon_start=1 /transl_table=11 /product="glycyl-tRNA synthetase beta chain" /protein_id="YP_003827288.1" /db_xref="GI:302391468" /db_xref="GeneID:9512705" /translation="MSNNKLLLEIGTEEIPAGFMEPTFEQLEELAAELFKQYRIETGS VATYGTPRRLTLVVNEVSSRQDDLTKEVKGPAKNIAFDDEGNPTKAGSGFARGQGLTV DELEIRDTDNGEYLFAVQTEEGKPTEELLPEILTELIHDLDFAKSMRWADKDMQFVRP IHWILALYGDEPVELEVADIESDTYTKGHRFLSTGQIEIDSAQDYFDRLNEEYVIVDQ NKRREMIIDQITELGKEAGGEVLIDEDLLKEVNYLVEYPTALMGSFDEEFLDLPREVL ITSMREHQRYFPIEDDNGDLMARFITVRNGSEDHIDIVREGNEKVLRARLADGMFFYE EDQKEDLEDKVDELKNVIFQEDLGTIYEKVKRLVELSKVFAKKLDLSEKEVKDSKRAA YLSKADLITEMVIEFPKLEGVMGREYAKLSGENKAVADAIFEHYLPRYATDVLPQTKT GQIVSIADKIDNIVGCFGVGLIPTGSQDPYALRRQAQGIVKIILDSDLKLNLAGLIDN VLELLVEAEKLKRSQGEVKTEVLDFFKQRLEHIFEERGVRYDVSNAVLATDITDLNDA VKRAEAVMEFRNEEKFEDLLTAYNRAGNLADKATSEDINPDLFTDESEEKLYEAYQST QAEVEELLVAKDYSSALDELATLQKPVDKFFNSVMVMADDEKVKNNRLALLKNTVQIF TKIADLSEIVID" misc_feature 743237..745300 /locus_tag="Acear_0683" /note="glycyl-tRNA synthetase subunit beta; Validated; Region: glyS; PRK01233" /db_xref="CDD:179258" misc_feature 743237..744898 /locus_tag="Acear_0683" /note="Glycyl-tRNA synthetase beta subunit; Region: tRNA_synt_2f; pfam02092" /db_xref="CDD:190207" misc_feature 744974..745285 /locus_tag="Acear_0683" /note="Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains; Region: Anticodon_Ia_like; cl12020" /db_xref="CDD:196302" gene 745336..746139 /locus_tag="Acear_0684" /db_xref="GeneID:9512706" CDS 745336..746139 /locus_tag="Acear_0684" /note="COGs: COG1806 conserved hypothetical protein; InterPro IPR005177; KEGG: hor:Hore_12430 hypothetical protein; PFAM: protein of unknown function DUF299; SPTR: B8CXH4 Putative phosphotransferase Hore_12430; PFAM: Domain of unknown function (DUF299)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827289.1" /db_xref="GI:302391469" /db_xref="GeneID:9512706" /translation="MSKALAFIVSDSIGETARQVVEAAATQFNSTTAVEFKSFSYVTD NDDVSKVIDEARNQRSIIAFTLINPDLREYLKTEAVKADIEYVDIMGPMMEALGNVLD KDPKLQPGLVRELDEEYFKKVDAIEFTVQYDDRNDIEGIKEADIVLVGVSRTSKTPMS IYLSYRGYKVANIPLVPEVTPPKILYNNPDHKVIGLTIDSETLNEIRQERLKTLGLNM KSDYASLSRITEELNYSYKVFNRIGCPVVDVSNKSVEESSNTVLKLIQK" misc_feature 745336..746136 /locus_tag="Acear_0684" /note="Domain of unknown function (DUF299); Region: DUF299; cl00780" /db_xref="CDD:186186" gene 746366..747016 /locus_tag="Acear_0685" /db_xref="GeneID:9512707" CDS 746366..747016 /locus_tag="Acear_0685" /note="InterPro IPR016842:IPR013196:IPR000644; KEGG: swo:Swol_1514 CBS domain-containing protein; PFAM: hypothetical protein; Helix-turn-helix type 11 domain protein; SMART: hypothetical protein; SPTR: Q0AWT7 CBS domain protein; PFAM: HTH domain; CBS domain" /codon_start=1 /transl_table=11 /product="signal transduction protein with CBS domains" /protein_id="YP_003827290.1" /db_xref="GI:302391470" /db_xref="GeneID:9512707" /translation="MNLSDRQRRIIEIVKNNEPITSKEIADKLDLTRSALRSDLSVLT MAKILEAKPRVGYFHLQDNSYLAEINKLYTKEVAEVKSVPVVVTEKTSIYNAITTLFL EDVGSLFVVDEEDKNLVGVISRKDLLKITIGDADINQVPVSVAMTRMPNIITIRADDT VLLAAKRLVNYEIDALPVVENFIDESGEPLEDKLKVIGRVSKTNITRVLADLGLEM" misc_feature 746381..746539 /locus_tag="Acear_0685" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 746636..746989 /locus_tag="Acear_0685" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair_4; cd04617" /db_xref="CDD:73116" gene 747033..747854 /locus_tag="Acear_0686" /db_xref="GeneID:9512708" CDS 747033..747854 /locus_tag="Acear_0686" /note="COGs: COG1806 conserved hypothetical protein; InterPro IPR005177; KEGG: drm:Dred_2470 hypothetical protein; PFAM: protein of unknown function DUF299; SPTR: A4J7C7 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF299)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827291.1" /db_xref="GI:302391471" /db_xref="GeneID:9512708" /translation="MLNRVEDEDLTVFIVSDSIGETAETVVNAVISQFGTDQIEIKKF TNITSIAKLSEVVSRAKDRKVIIAYTIVLPELCEHLKKAAKAAEIPIVDVIGPAMLKF SELLGQKPKLEPGLNRQLDQEYFERISCIDYAIRCDDGKELKKLEEADVVIIGVSRTS KTPLSMYLAHQGYKAANIPLMPEVDVPQELYELSAKKLVGLTIDPTVLQEIRQERLNS MQFKKQADYATMDRILKELDFAEEIMKKLGCMIINVTNKSIEETAHKILSERSDL" misc_feature 747066..747833 /locus_tag="Acear_0686" /note="Domain of unknown function (DUF299); Region: DUF299; cl00780" /db_xref="CDD:186186" gene 747854..748837 /locus_tag="Acear_0687" /db_xref="GeneID:9512709" CDS 747854..748837 /locus_tag="Acear_0687" /EC_number="3.1.3.11" /note="COGs: COG1494 Fructose-1 6-bisphosphatase/sedoheptulose 1 7-bisphosphatase and related protein; InterPro IPR004464; KEGG: nth:Nther_2876 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein; PRIAM: Fructose-bisphosphatase; SPTR: B2A3J4 Fructose-1,6-bisphosphatase, class II; TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II" /codon_start=1 /transl_table=11 /product="fructose-1,6-bisphosphatase, class II" /protein_id="YP_003827292.1" /db_xref="GI:302391472" /db_xref="GeneID:9512709" /translation="MERELALEFVRVTEAAALAAAPWMGKGDKEAADQAAVDAMRATF DTVNIKGRVVIGEGEKDEAPMLYIGEEIGGAESPELDIAVDPVEGTTLVAKGLPNSLA VVAAAKKGNLLNAPDMYMRKIAVGSEAKGAIDLKASPTENLEAIAEAKDQEVSDLTVI LLDRPRHEEIIEEIREAGARIKMITDGDVAGGIATALPHTGVDMLIGIGGAPEGVLAA AALKCLGGEMQAQLHPRNDEETQRAIDMSGIDDINKVFTTDDLAKGEDVMFSVTGITN GELLRGVQYSGQKAETQSIVMRSKTGTVRTVKAEHKIKQKPSYFRDEVIKF" misc_feature 747854..748810 /locus_tag="Acear_0687" /note="Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins [Carbohydrate transport and metabolism]; Region: GlpX; COG1494" /db_xref="CDD:31683" misc_feature 747857..748786 /locus_tag="Acear_0687" /note="Bacterial fructose-1,6-bisphosphatase, glpX-encoded. A dimeric enzyme dependent on Mg(2+). glpX-encoded FPBase (FBPase class II) differs from other members of the inositol-phosphatase superfamily by permutation of secondary structure elements. The core...; Region: FBPase_glpX; cd01516" /db_xref="CDD:30132" misc_feature order(747950..747952,748019..748024,748106..748120, 748415..748417,748490..748492) /locus_tag="Acear_0687" /note="putative active site [active]" /db_xref="CDD:30132" gene 748859..751516 /locus_tag="Acear_0688" /db_xref="GeneID:9512710" CDS 748859..751516 /locus_tag="Acear_0688" /EC_number="2.7.9.1" /note="COGs: COG0574 phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterProIPR010121:IPR018274:IPR000121:IPR013815:IPR 013816:IPR008279:IPR015813:IPR002192; KEGG: chy:CHY_0443 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; PRIAM: Pyruvate, phosphate dikinase; SPTR: Q3AEY0 Pyruvate, phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase" /codon_start=1 /transl_table=11 /product="pyruvate phosphate dikinase" /protein_id="YP_003827293.1" /db_xref="GI:302391473" /db_xref="GeneID:9512710" /translation="MNSEKKYIYSFEEGSLDLKPILGGKGASLGEMTSLDLPVPPGMT LTTEACNLYFENDEELPEFLKEGTREYLKDLEEKTGKNFGDDNNPLLLSVRSGATISM PGMMDTILNLGLNDTSVQGLAKEVNDERFAYDCYRRFIQMFGDVVLGIEGYKFGRTLD SLKEEVDADSDLDLTTDDLKKLVAQYKEIIKDEAGIEFPQDPMEQLIKSVDAVFGSWN NKRAIVYRDAHDIAHDLGTAVNVQTMVFGNMGKDSGTGVVFTRNPSTGVNELYGEYLL NAQGEDVVAGIRTPQSIQTLKEELPEVFDQLVDVTETLEDHYKNMQDIEFTIENGQLY LLQTRTGKRTAKAAIKMAADMADEGLIDKEEALLRVEPEHVEKVLHKQIDPEAEPEVI AKGLPASPGAAAGKVVFSADEAEKLGDKGEKVILVSLETTPEDINGVIASQGVLTTRG GMTSHAAVVARGMGKPCVCGCEEIKIDFEKEEFLVGNRRFEKGDKITINGGTGEIMVG KVEMTEPRLSEECRKILKWANETKELGIRANADNGPDAKKAFEFGAEGIGLCRTEHMF MAAERVPLVQQLILSDSEAEKEEALAELEPMQRNDFEEIFTEMKGKPVTVRLLDPPLH EFLPDLVELVEEIAKLESAAEDNKEELNKKRKLLRKVKDMNESNPMLGMRGCRLGIMV PEIYEMQIRAVFKAAVNVAEEGIDVQPEIMLPLVTHVNEFKMLRSRVDKVADEVLAEA DSELSYKVGTMIELPRACMTAEEIAEEADFFSFGTNDLTQTTFGFSRDDAESKFLHHY VEEDILEDNPFISLDPNGVGKLVKMATDDGRKANENLKVGICGEHGGEPKSIGLCQEY GLDYVSCSPYRVPVARLAAVQAKIESDRE" misc_feature 748871..751510 /locus_tag="Acear_0688" /note="pyruvate phosphate dikinase; Provisional; Region: PRK09279" /db_xref="CDD:181751" misc_feature 748916..749875 /locus_tag="Acear_0688" /note="Pyruvate phosphate dikinase, PEP/pyruvate binding domain; Region: PPDK_N; pfam01326" /db_xref="CDD:189943" misc_feature 750119..750358 /locus_tag="Acear_0688" /note="PEP-utilising enzyme, mobile domain; Region: PEP-utilizers; cl01586" /db_xref="CDD:194171" misc_feature 750401..751492 /locus_tag="Acear_0688" /note="Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors. Like other allosteric enzymes, PK has a high substrate affinity R state and a low...; Region: Pyruvate_Kinase; cl09155" /db_xref="CDD:195807" gene 751650..752243 /locus_tag="Acear_0689" /db_xref="GeneID:9512711" CDS 751650..752243 /locus_tag="Acear_0689" /note="COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: dae:Dtox_3039 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: C1TFJ6 Multimeric flavodoxin WrbA; PFAM: NADPH-dependent FMN reductase" /codon_start=1 /transl_table=11 /product="NADPH-dependent FMN reductase" /protein_id="YP_003827294.1" /db_xref="GI:302391474" /db_xref="GeneID:9512711" /translation="MLIAGLNGSPNSDGNTDLLLNKALDAAKDLGAETELIQVSSGLE EIEEPYCTACSQPCSKACYEGTKLEEQYELLSEADGVIIGSPVYFGTVSAQLKAFWDM TRDLRGQNSLLNTVGGTITVGAARFGGQETTIKAVHDLMLVQGMIVIGDGDSETDAGH QGAAGQRKAAEDENAQKRAKTVGRRVVKVAEATESLR" misc_feature 751650..752213 /locus_tag="Acear_0689" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:193819" gene 752262..753278 /locus_tag="Acear_0690" /db_xref="GeneID:9512712" CDS 752262..753278 /locus_tag="Acear_0690" /note="COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674:IPR003607:IPR006261; KEGG: hor:Hore_12420 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: B8CXH3 Deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase" /codon_start=1 /transl_table=11 /product="deoxyguanosinetriphosphate triphosphohydrolase" /protein_id="YP_003827295.1" /db_xref="GI:302391475" /db_xref="GeneID:9512712" /translation="MMKSHRRRLEELEHKNLVQDAALSGETEGRKYAESKCEIRTDFQ RDRDRIIHSKAFRRLKHKTQVFIAPEGDHYRTRLTHTLEVAQIARTIAKALHLNEDLT EAIALGHDLGHTPFGHSGEEALAEMYSKGFKHNHQSLRVVDLLEDKSGAYPGLNLTLE VRDGILTHTGNQQPKTLEGEIVRIADRIAYINHDIDDALRAEIISTSDLPEGALEVLG RTSSQRIDRMVKDIIKHSWQQPEINRSQQVKEATEELRQFLYNRVYVGSKAKTEEDKA KGLLKQLYTYYNDNPEELPQEFKNKLEMYPLPRIVVDYIAGMSDRYALKRGREIFLPR PWLG" misc_feature 752322..753272 /locus_tag="Acear_0690" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" misc_feature 752328..753230 /locus_tag="Acear_0690" /note="deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional; Region: PRK01096" /db_xref="CDD:179219" gene 753368..753811 /locus_tag="Acear_0691" /db_xref="GeneID:9512713" CDS 753368..753811 /locus_tag="Acear_0691" /note="COGs: COG1671 conserved hypothetical protein; InterPro IPR003791; KEGG: sab:SAB0630c hypothetical protein; PFAM: protein of unknown function DUF188; SPTR: Q2YSQ0 UPF0178 protein SAB0630c; PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827296.1" /db_xref="GI:302391476" /db_xref="GeneID:9512713" /translation="MMQILVDGDACPIKDLIIDLAVKYSCRVTIISSIAHWSNRLNDK SVKEVTVDSNPEAADMKIINLACSGDLVITQDYGLAALLLEQEVKVLSPRGKVFTNQN IDYLLAKRHHSAKLRRSGHKTKGPSQYSKQDRRRFKTAFIKLVNS" misc_feature 753371..753805 /locus_tag="Acear_0691" /note="Uncharacterized BCR, YaiI/YqxD family COG1671; Region: DUF188; cl00727" /db_xref="CDD:186163" gene 753824..755674 /locus_tag="Acear_0692" /db_xref="GeneID:9512714" CDS 753824..755674 /locus_tag="Acear_0692" /note="COGs: COG0358 DNA primase; InterProIPR002694:IPR013264:IPR006171:IPR019475:IPR 006154:IPR006295; KEGG: hor:Hore_12410 DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase, DnaB-helicase binding domain; SMART: zinc finger CHC2-family protein; Toprim sub domain protein; SPTR: B8CXH2 DNA primase; TIGRFAM: DNA primase; PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core" /codon_start=1 /transl_table=11 /product="DNA primase" /protein_id="YP_003827297.1" /db_xref="GI:302391477" /db_xref="GeneID:9512714" /translation="MAYLNDEFIDKVRDNNDIIDVISDYTNLEKAGKNYKALCPFHDE RTPSFMVNPEKQLYHCFGCGVGGNVFNFMMDIENLDFIEAVEILAQRIGLSLPERKDS STGESTTKSEIYEIHNWAVKFFNYLLTETNQGSEAYEYLRQRGIKEETIDQFELGYAP DSWRGLFDFLRKKGYSADRIQQAGLIIPQKKGKGYYDRFRNRIIFTINNLRGQAIGFG GRVVDDSHPKYLNSPQTPVFNKKNILYGLARAKREIKRSGSVVIVEGYTDVITGHQFG IENIVASLGTSLTKSQARLLRRYADRVYIAYDGDVAGENATLRGFNILKNTGLEVYVV NLPVDQDPDEVIRSQGKEEFELLLSEAVSLIEFKLESLLTDRDLTKIEQKVEAVDDIM PVLAGIENEIKQAEYIKKIAGRLDVETGVIKSRLKKFQQDVSEQDRNYRDRNNKFKSD SKVDSEAESDTQFQFEKKLLELMIKDTQILNLVKAELDSDEFITDEYQSAAELIFDID NSDWEELINKVNSAEIRQMITEVSLGNYQKEEINEYQLEEAKGYIKKIKEYQLKMKKE RLDAEIEQHEASRDFAKVNQLLRERQEVVQLLQDPDSLLGNNFDVGKGGY" misc_feature 753824..755599 /locus_tag="Acear_0692" /note="DNA primase; Validated; Region: dnaG; PRK05667" /db_xref="CDD:180189" misc_feature 753839..754126 /locus_tag="Acear_0692" /note="CHC2 zinc finger; Region: zf-CHC2; cl02597" /db_xref="CDD:141551" misc_feature 754190..754576 /locus_tag="Acear_0692" /note="DNA primase catalytic core, N-terminal domain; Region: Toprim_N; pfam08275" /db_xref="CDD:191985" misc_feature 754595..754831 /locus_tag="Acear_0692" /note="TOPRIM_DnaG_primases: The topoisomerase-primase (TORPIM) nucleotidyl transferase/hydrolase domain found in the active site regions of proteins similar to Escherichia coli DnaG. Primases synthesize RNA primers for the initiation of DNA replication. DnaG...; Region: TOPRIM_DnaG_primases; cd03364" /db_xref="CDD:173784" misc_feature order(754613..754618,754625..754627,754745..754747, 754751..754753,754757..754759) /locus_tag="Acear_0692" /note="active site" /db_xref="CDD:173784" misc_feature order(754613..754615,754745..754747) /locus_tag="Acear_0692" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173784" misc_feature order(754619..754624,754640..754645,754673..754675) /locus_tag="Acear_0692" /note="interdomain interaction site; other site" /db_xref="CDD:173784" misc_feature 754913..755077 /locus_tag="Acear_0692" /note="DnaB-helicase binding domain of primase; Region: DnaB_bind; pfam10410" /db_xref="CDD:192576" gene 755674..756750 /locus_tag="Acear_0693" /db_xref="GeneID:9512715" CDS 755674..756750 /locus_tag="Acear_0693" /note="COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR000943:IPR011991:IPR007127:IPR009042:IPR 007627:IPR007624:IPR007630:IPR013325:IPR013324:IPR014284:I PR012760; KEGG: hor:Hore_12400 RNA polymerase, sigma 70 subunit, RpoD family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; SPTR: B8CXH1 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 70 subunit, RpoD subfamily" /protein_id="YP_003827298.1" /db_xref="GI:302391478" /db_xref="GeneID:9512715" /translation="MTDKVRNIVEEKVEKLIEKGNQEGQITYKEVMDTLAKVELTPEQ IDDIYQRFAELDIEVVDEDEDEVSKDTEEDLDLSVPDGVGIDDPVRMYLKEIGKVDLL TAEEEVELAKRMEEGDMEAKRMLVEANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIK AVEKFDYTKGYKFSTYATWWIRQAITRSIADQARTIRIPVHMVETINKVIRVSRHLLQ ELGREPTPEEIAEEMDLSEEKVREVLKISQEPVSLETPIGEEEDSHLGDFIEDDDAPA PSVAASHMMLQEQLDEVLDTLSDREKRVLELRFGVEDGRSRTLEEVGKEFGVTRERIR QIEAKALRKLRHPSRSKKLKDYLD" misc_feature 755731..756747 /locus_tag="Acear_0693" /note="RNA polymerase sigma factor RpoD; Validated; Region: PRK09210" /db_xref="CDD:181701" misc_feature 755929..756039 /locus_tag="Acear_0693" /note="Sigma-70 factor, region 1.2; Region: Sigma70_r1_2; pfam00140" /db_xref="CDD:189414" misc_feature 756046..756258 /locus_tag="Acear_0693" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature 756283..756483 /locus_tag="Acear_0693" /note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539" /db_xref="CDD:146934" misc_feature 756532..756708 /locus_tag="Acear_0693" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cd06171" /db_xref="CDD:100119" misc_feature order(756565..756567,756595..756597,756625..756630, 756658..756660,756664..756669,756673..756681, 756685..756690,756694..756696) /locus_tag="Acear_0693" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:100119" gene 756908..756983 /locus_tag="Acear_R0051" /db_xref="GeneID:9512716" tRNA 756908..756983 /locus_tag="Acear_R0051" /product="tRNA-Asn" /db_xref="GeneID:9512716" gene 756994..757070 /locus_tag="Acear_R0052" /db_xref="GeneID:9512717" tRNA 756994..757070 /locus_tag="Acear_R0052" /product="tRNA-Met" /db_xref="GeneID:9512717" gene 757210..757899 /locus_tag="Acear_0694" /db_xref="GeneID:9512718" CDS 757210..757899 /locus_tag="Acear_0694" /note="COGs: COG2384 SAM-dependent methyltransferase; InterPro IPR006901; KEGG: tte:TTE1754 SAM-dependent methyltransferase; PFAM: protein of unknown function DUF633; SPTR: Q8R971 Predicted SAM-dependent methyltransferase; PFAM: Family of unknown function (DUF633)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827299.1" /db_xref="GI:302391479" /db_xref="GeneID:9512718" /translation="MKLSPRLKEITELISSPYSVADIGTDHAYLPIYLAENFDCEKLI ASDVKQAPYQTAVENVQQAELEDMIDVRLGCGLKILEPNEVKAAVIAGVGSDTIIDII ADNKQITDSITEFVLQPMNHAARLRNWLMNNGFQIIDEGLAQEGTRFYEIILIQSGSE QISDPFLLEIGPRLLEKNPQCYQEFLVSKEKKWQTILNQLPDNSSSGLTAKKKQLKYR LDKIQEVMECL" misc_feature 757210..757887 /locus_tag="Acear_0694" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene 757890..759011 /locus_tag="Acear_0695" /db_xref="GeneID:9512719" CDS 757890..759011 /locus_tag="Acear_0695" /note="COGs: COG0327 conserved hypothetical protein; InterPro IPR017221:IPR002678:IPR011322; KEGG: hor:Hore_12390 conserved hypothetical protein TIGR00486; PFAM: protein of unknown function DUF34; SPTR: B8CXH0 Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827300.1" /db_xref="GI:302391480" /db_xref="GeneID:9512719" /translation="MSLSIQQIIQLMEEIASEELALEWDNVGLQIGSYSQQVDKVLVT LDVIPAIMEEAVEKNVDLIISHHPVIFNSLSQVRFDTEIGDLVQTAAKNEISIYTAHT NYDIAQGGLNDQLAAKLGLTDLQVLKTTCEDELKKLVVFIPQKNLEEVRKAIISQGAG WIGNYRDCTFSVEGTGTFKPLAGTDPHIGQKDQLEKVDEVRLETILPASKLEQVLDKL ETVHPYEEVAYDLYSVEATGEQLGLGRIGNLKTSCEFNQFVAQAKDVLELDRVRVVKP ENSEVKRVAVCSGSGADLIRPAVFKGADLLVTGDIKYHDAELAAKMGLGIIDAGHYGT EVIMEECLVESLVTEIKQAGLEEIEIITTDRNKGFIAIV" misc_feature 757908..>758351 /locus_tag="Acear_0695" /note="NIF3 (NGG1p interacting factor 3); Region: NIF3; cl01309" /db_xref="CDD:194097" misc_feature 758286..758606 /locus_tag="Acear_0695" /note="NIF3 (NGG1p interacting factor 3); Region: NIF3; cl01309" /db_xref="CDD:194097" misc_feature <758613..758927 /locus_tag="Acear_0695" /note="NIF3 (NGG1p interacting factor 3); Region: NIF3; cl01309" /db_xref="CDD:194097" gene 759090..759806 /locus_tag="Acear_0696" /db_xref="GeneID:9512720" CDS 759090..759806 /locus_tag="Acear_0696" /note="COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: tye:THEYE_A1031 hypothetical protein; PFAM: protein of unknown function DUF164; SPTR: C0GC07 Putative uncharacterized protein; PFAM: Putative zinc ribbon domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827301.1" /db_xref="GI:302391481" /db_xref="GeneID:9512720" /translation="MAKLQELYRLQQLDRKISRIEEELDSRDLLAEQEEVKIEIAELK DKLAANKEKEKELNKKLKNKEFDDSRLETQLNEYQEQLYDGENNVKELEQLQKKINEI KKQQSQLEDEILDLMIELEEVEANQAEIKQDLEDYQLKLNKLQKSYKEEQSELSIELE EVKQKKESLSEAIGDDLMAEYQKLKEKKHGLAVVELQDGYCMGCRVGLPAKLIEDVRR GNQIFKCERCGRILYWTDNE" misc_feature <759291..759803 /locus_tag="Acear_0696" /note="Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]; Region: COG1579" /db_xref="CDD:31767" misc_feature 759618..759785 /locus_tag="Acear_0696" /note="Putative zinc ribbon domain; Region: DUF164; pfam02591" /db_xref="CDD:190355" gene 759825..760430 /locus_tag="Acear_0697" /db_xref="GeneID:9512721" CDS 759825..760430 /locus_tag="Acear_0697" /note="COGs: COG0328 Ribonuclease HI; InterPro IPR002156:IPR012337; KEGG: mxa:MXAN_5728 ribonuclease H; PFAM: ribonuclease H; SPTR: Q1D0F7 Ribonuclease H; PFAM: RNase H" /codon_start=1 /transl_table=11 /product="ribonuclease H" /protein_id="YP_003827302.1" /db_xref="GI:302391482" /db_xref="GeneID:9512721" /translation="MELNIYTDGASRGNPGPGGIGVLIKDGSNNIKEELADYIGEATN NEAEYQAIIAGLKKARELNSESISLFSDSQLVIKQLTGEYRVRSEKLKPYYLEIKELL QDLPDCDFQHIPREENHKADELANLGIDQFQQSRVDSIGDVEQLVAELDEETAEFETS ADIESVIDSICDKLNQDEGDSEECLKSGIIYGLLLADKINK" misc_feature 759837..760214 /locus_tag="Acear_0697" /note="RNAse HI family that includes Archaeal RNase HI; Region: RNase_HI_archaeal_like; cd09279" /db_xref="CDD:187703" misc_feature order(759846..759857,759951..759959,759966..759968, 760038..760040,760158..760160,760200..760202) /locus_tag="Acear_0697" /note="RNA/DNA hybrid binding site [nucleotide binding]; other site" /db_xref="CDD:187703" misc_feature order(759846..759848,759966..759968,760038..760040, 760188..760190) /locus_tag="Acear_0697" /note="active site" /db_xref="CDD:187703" gene 760543..760836 /gene="rnpB" /locus_tag="Acear_R0053" /db_xref="GeneID:9512722" ncRNA 760543..760836 /gene="rnpB" /locus_tag="Acear_R0053" /ncRNA_class="RNase_P_RNA" /product="RNA component of RNaseP" /note="Bacterial RNase P class A as predicted by Rfam (RF00010), score 266.57" /db_xref="GeneID:9512722" gene 760967..762724 /locus_tag="Acear_0698" /db_xref="GeneID:9512723" CDS 760967..762724 /locus_tag="Acear_0698" /note="KEGG: Cenpf; centromere protein F ; K11499 centromere protein F; SPTR: Q3EZB7 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827303.1" /db_xref="GI:302391483" /db_xref="GeneID:9512723" /translation="MLEEYFINQNEEWLGAMEIVEIEFPIPSIIKELEDLFLKLNIVP VIAGGVVSDSYLQASGLITENKSSDIDIFLDLKVNENRIRQELMANQEVSDLTEIQQE GIKANYSTEIIDKKASFRYKEHKCDLLFCINNRTKIWDFDLTFRQFMYLNGKLYATQL AVNDSQQEILRVVNPVNGLNTLQRIIEFQQRYGFSVEKRSLNLLLDYIAWRGTKKGLI TKEFNNYVPQYFFTGNLRWYYFRWLSQKKAHGRGLFTYLLRTERYYNDYFTDLVGTYN IEYDSNLNYRRFVNKVKDIEFKIETEIEDKEAIINNSGDKVSSVAIDWQNCRRVKTIL EALTQLEFEEFISGYLDDDKVRKIYKWHSPKLGKMIEGLEDFISQLDLEYYQNYTLKL CNQLLELFNTRGPSNLEFKLTISQQAEDLLSVSTDRNWTSCLELPEPDQQRISAARVA ANLQPNTVVAYITDSNSDQWLGRVLIQLLQNGKLRLEKYYGEPMLKEILINELEEVIE QTGYQLNKLNVSRSCTFIEWEPYSDQGRVKKIDTDIYRKYYIDYSLPSFVRNKLNKIE VECEDNGKAGLFRPQRNLY" gene 762681..763514 /locus_tag="Acear_0699" /db_xref="GeneID:9512724" CDS 762681..763514 /locus_tag="Acear_0699" /EC_number="4.2.1.51" /note="COGs: COG0077 prephenate dehydratase; InterPro IPR018528:IPR001086:IPR002912; KEGG: msi:Msm_1052 prephenate dehydratase, PheA; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; PRIAM: prephenate dehydratase; SPTR: A5UM29 prephenate dehydratase, PheA; PFAM: prephenate dehydratase; ACT domain" /codon_start=1 /transl_table=11 /product="prephenate dehydratase" /protein_id="YP_003827304.1" /db_xref="GI:302391484" /db_xref="GeneID:9512724" /translation="MERLAYLGPRGTFTNEAAEKFIKDREIELVPYCEIRTLVEAVDN QQEEAGLVPIENSLEGSVNIILDLLAHQVDLKIQAEILVPINHNLIGHPGADIDSIEK VLSHRQALAQCRNSLKDLLGDFDTVNADSTAQAVNIIQQKDSTWGAIGSRLVAKLHGL DILAANIQDNQLNRTRFVVLSKHDGRWVEDSKTSLVCSPVKNRPGILYEILKLFALRN INLTKIESRPARKKLGEYIFFIDFEGDRRDRKVKETLAELDRKTSMLKVLGSYPQFKE E" misc_feature 762681..763496 /locus_tag="Acear_0699" /note="prephenate dehydratase; Provisional; Region: PRK11898" /db_xref="CDD:183366" misc_feature 762693..763232 /locus_tag="Acear_0699" /note="Prephenate dehydratase; Region: PDT; pfam00800" /db_xref="CDD:144409" misc_feature 763254..763496 /locus_tag="Acear_0699" /note="C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme; Region: ACT_CM-PDT; cd04905" /db_xref="CDD:153177" misc_feature order(763293..763304,763353..763364) /locus_tag="Acear_0699" /note="putative L-Phe binding site [chemical binding]; other site" /db_xref="CDD:153177" gene 763540..764304 /locus_tag="Acear_0700" /db_xref="GeneID:9512725" CDS 763540..764304 /locus_tag="Acear_0700" /note="COGs: COG0217 conserved hypothetical protein; InterPro IPR017856:IPR002876; KEGG: hor:Hore_12350 conserved hypothetical protein TIGR01033; PFAM: protein of unknown function DUF28; SPTR: B8CXG6 UPF0082 protein Hore_12350; PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827305.1" /db_xref="GI:302391485" /db_xref="GeneID:9512725" /translation="MAGHSKWANIKHQKKKEDRRRAKLFSKLSKRIAVEAREGGGDPE KNPDLRMAIQKAKDNNMPKDNIQRAIDRGTGNLDGVEYERIIYEGYGPAGVALYLDLM SDNRNRTASELRHLLSQHGGNLGEKGCVAWMFKRKGQLIIDRTEVEVDEDEVLMSALE AGAEDISIEEQMIEIIIEPSGLEDARKSMEEDGYEFSSGDVVMIPENTVDVDNKKEAQ KVLDLMDELEDHDDVQEVYSNFNIPDEIMTELEKEE" misc_feature 763540..764289 /locus_tag="Acear_0700" /note="Domain of unknown function DUF28; Region: DUF28; cl00361" /db_xref="CDD:193787" gene 764410..765066 /locus_tag="Acear_0701" /db_xref="GeneID:9512726" CDS 764410..765066 /locus_tag="Acear_0701" /note="InterPro IPR015050; KEGG: hor:Hore_12340 hypothetical protein; PFAM: Domain of unkown function DUF1901; SPTR: A1HT73 Putative uncharacterized protein; PFAM: Domain of unkown function (DUF1901)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827306.1" /db_xref="GI:302391486" /db_xref="GeneID:9512726" /translation="MLDKKKIILISLVIILLASVITYFGLDLRNNESTPQKEDRIKSE AEEDITQSQQKFSQLIKEKREEFETKLELTEERLLTGPNPSLIFKTYYTRCGDIVVDH KKAKNEFEINNLVAKYPQWTLAKKGKERIILKRRVDKVCPEHKEEMYLGIKDGTVAIF YGNPDDEQEILKRKTNISVDLLPAEEIESLKEGIIVESQKELLALLEGLSSIQDEQLK " misc_feature 764821..765030 /locus_tag="Acear_0701" /note="BofC C-terminal domain; Region: BofC_C; pfam08955" /db_xref="CDD:192185" gene 765169..765774 /locus_tag="Acear_0702" /db_xref="GeneID:9512727" CDS 765169..765774 /locus_tag="Acear_0702" /note="COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; InterProIPR012340:IPR013849:IPR011114:IPR003583:IPR 016027:IPR010994:IPR000085; KEGG: dae:Dtox_1110 Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SPTR: C1T953 Holliday junction DNA helicase subunit RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit" /codon_start=1 /transl_table=11 /product="Holliday junction DNA helicase RuvA" /protein_id="YP_003827307.1" /db_xref="GI:302391487" /db_xref="GeneID:9512727" /translation="MIAHLTGELVLKEEARIVIDVQGVGYEVMIPTSVQNRLPNIGED IKVYTHTYVREDRFVLYGFLQLSELELFGKLLKVSKVGPKVAVSILSTLNAREFKLAV AKEDIEVLKEVKGIGKKTAQRLILEMKGKIDLDRIMEEEESSQSVDGIEREEAVEGLM NLGYNIQEAREAVTEACKGVDEAAGVEEVIKLALQKFGQND" misc_feature 765169..765756 /locus_tag="Acear_0702" /note="Holliday junction DNA helicase RuvA; Reviewed; Region: ruvA; PRK00116" /db_xref="CDD:178876" misc_feature 765169..765354 /locus_tag="Acear_0702" /note="RuvA N terminal domain; Region: RuvA_N; pfam01330" /db_xref="CDD:110340" misc_feature 765622..765762 /locus_tag="Acear_0702" /note="RuvA, C-terminal domain; Region: RuvA_C; pfam07499" /db_xref="CDD:148866" gene 765804..766805 /locus_tag="Acear_0703" /db_xref="GeneID:9512728" CDS 765804..766805 /locus_tag="Acear_0703" /note="COGs: COG2255 Holliday junction resolvasome helicase subunit; InterProIPR008823:IPR011991:IPR008824:IPR003959:IPR 003593:IPR004605; KEGG: hor:Hore_12310 Holliday junction DNA helicase RuvB; PFAM: ATPase AAA; Holliday junction DNA helicase RuvB domain; SMART: AAA ATPase; SPTR: B8CXG2 Holliday junction DNA helicase RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit" /codon_start=1 /transl_table=11 /product="Holliday junction DNA helicase subunit RuvB" /protein_id="YP_003827308.1" /db_xref="GI:302391488" /db_xref="GeneID:9512728" /translation="MEDRIVSPDENTSDKELDSSLRPKSLNEYIGQEKVKNNLEIFIE AAKGRGEALDHVLLYGPPGLGKTTLANIIAEEMGVNIKITSGPAIERPGDLAAILTNL NPNDVLFIDEIHRLNRMVEEVLYPAMEDFALDIIIGDGPSARSVRLDLAQFTLVGATT KAGQLTSPLRDRFGVISRLKLYSTEELQQIVYRSARVLNVKIDDAGALELAKRSRGTP RIANRLLKRVRDYAQVRADGVITEEVAKAGLEMLEVDELGLDDIDRKMLQTLINKFGG GPVGLNTLSAAVGEEEATIEDVYEPYLLQIGYLQRTPRGRVATKLAYEHLDLDYKEE" misc_feature 765813..766793 /locus_tag="Acear_0703" /note="Holliday junction DNA helicase RuvB; Reviewed; Region: ruvB; PRK00080" /db_xref="CDD:178847" misc_feature 765891..766346 /locus_tag="Acear_0703" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 765981..766004 /locus_tag="Acear_0703" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(765984..766007,766134..766136,766281..766283) /locus_tag="Acear_0703" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 766122..766139 /locus_tag="Acear_0703" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 766317..766319 /locus_tag="Acear_0703" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 766566..766787 /locus_tag="Acear_0703" /note="Holliday junction DNA helicase ruvB C-terminus; Region: RuvB_C; pfam05491" /db_xref="CDD:191283" gene 766808..767026 /locus_tag="Acear_0704" /db_xref="GeneID:9512729" CDS 766808..767026 /locus_tag="Acear_0704" /note="KEGG: gem:GM21_0889 hypothetical protein; SPTR: C6E1N7 Putative uncharacterized protein; PFAM: protein of unknown function (DUF2905)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827309.1" /db_xref="GI:302391489" /db_xref="GeneID:9512729" /translation="MGAQFSGLGKSLIIIGLLLVAVGAIFTLDLNLPLGRLPGDIRIE RENFSFYLPITTSIILSIVLSLLLKFFR" misc_feature <766901..>766975 /locus_tag="Acear_0704" /note="Protein of unknown function (DUF2905); Region: DUF2905; pfam11146" /db_xref="CDD:192711" gene 767446..768471 /locus_tag="Acear_0705" /db_xref="GeneID:9512730" CDS 767446..768471 /locus_tag="Acear_0705" /note="COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); InterPro IPR003699; KEGG: cno:NT01CX_1834 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: C5VTD4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferas e-isomerase; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine--tRNA ribosyltransferase-isomerase" /protein_id="YP_003827310.1" /db_xref="GI:302391490" /db_xref="GeneID:9512730" /translation="MKVSDFDYDLPEELIAQQPAEPRDESQLMVLDRKTGEIKERIFK KIIDLIEPGDTLVLNNTEVIPARLYGKKEKTGGKVEFLLLTETELDTWEVLVRPGRKV KIGTRVVFGDNDLIAEVKDRTDFGGRVVEFEYKGVFAEVLDKLGEMPLPPYITKELEE RNQYQTVYAQKKGAAAAPTAGLHFTEEVLEQLEEKGVNIAAITLHVGLGTFRPVRADE VEEHDMHAEYYEVTDKAADTINQTKESGGRIIAVGTTVTRTLETVGNKEGYVEADKGW TDIFIYPGYEFKVIDGLLTNFHLPESTLIMMVTAFAGYDKVMAAYQEAIDKEYRFYSF GDAMLII" misc_feature 767446..768468 /locus_tag="Acear_0705" /note="Queuosine biosynthesis protein; Region: Queuosine_synth; cl00523" /db_xref="CDD:186057" misc_feature 767446..768468 /locus_tag="Acear_0705" /note="S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional; Region: queA; PRK00147" /db_xref="CDD:178900" gene 768495..769610 /locus_tag="Acear_0706" /db_xref="GeneID:9512731" CDS 768495..769610 /locus_tag="Acear_0706" /EC_number="2.4.2.29" /note="COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; InterPro IPR002616:IPR004803; KEGG: hor:Hore_12290 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: B8CXG0 Queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming" /codon_start=1 /transl_table=11 /product="tRNA-guanine transglycosylase" /protein_id="YP_003827311.1" /db_xref="GI:302391491" /db_xref="GeneID:9512731" /translation="MTFEYTLQKESTDTKARCGEFTTPHGKIETPVFMPVGTKATVKT MSPEELEEIDTQIILGNTYHLYLRPGHDLIEEAGGLHEFMNWNGPILTDSGGFQVFSL ADRREISEEGVEFQSHLDGSKEFISPEKSIEIQMGLGADIIMAFDECPAHSAEKEYIK ESLELTTRWAKRCQQAHTRDDQALFGIIQGGMHRDLREQSAEEITALDFPGYAIGGLS VGESKELMHEVLDYAPDLLPADKPRYLMGVGTPQDLFEGVMRGIDMFDCVFPTRIARN GAVFTSQGRITIRNATYKRQFTSLDPECDCYVCQNYTRAYIRHLIKRNEILGLRLTTY HNLYFLNDLMAKMRQAIFAEELFEFRENFYRKYGLEL" misc_feature 768495..769592 /locus_tag="Acear_0706" /note="Queuine tRNA-ribosyltransferase; Region: TGT; cl00409" /db_xref="CDD:193805" gene 769711..769995 /locus_tag="Acear_0707" /db_xref="GeneID:9512732" CDS 769711..769995 /locus_tag="Acear_0707" /note="COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: hor:Hore_12280 preprotein translocase, YajC subunit; PFAM: YajC family protein; SPTR: B8CXF9 Preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit" /codon_start=1 /transl_table=11 /product="preprotein translocase, YajC subunit" /protein_id="YP_003827312.1" /db_xref="GI:302391492" /db_xref="GeneID:9512732" /translation="MNIVMSILPWVAIFGIFWFLFIRPQKKKQQEHEDMVDNLEVGDE IITIGGIKGKITKIDGDEFRLKISPEVEVEVIRNAVGRLAGDESEENNDE" misc_feature 769714..769956 /locus_tag="Acear_0707" /note="Preprotein translocase subunit; Region: YajC; cl00806" /db_xref="CDD:193942" gene 770052..770600 /locus_tag="Acear_0708" /db_xref="GeneID:9512733" CDS 770052..770600 /locus_tag="Acear_0708" /EC_number="3.4.21.89" /note="COGs: COG0681 Signal peptidase I; InterProIPR019756:IPR019757:IPR019758:IPR000223:IPR 011056:IPR019759:IPR015927; KEGG: hor:Hore_12270 signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: B8CXF8 Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type" /codon_start=1 /transl_table=11 /product="signal peptidase I" /protein_id="YP_003827313.1" /db_xref="GI:302391493" /db_xref="GeneID:9512733" /translation="MQITKQEVREFFESVVIAGVLAFFIITFVAQSFVVQGESMEPTL HNGERLFVDKVSYRFSNPDRGDIIVFSPQGSPGRKYIKRVIGLPGDKVMIRDKKVYVN GTSIKEDYTLEETLGNFGPYHVPQDHLFVLGDNRNNSADSRYTSLVGFVSYSDIEGRA FWVYWPLDEMRIIDHEEYKRIN" misc_feature 770082..770555 /locus_tag="Acear_0708" /note="signal peptidase I, bacterial type; Region: sigpep_I_bact; TIGR02227" /db_xref="CDD:188205" misc_feature 770142..770531 /locus_tag="Acear_0708" /note="The S26 Type I signal peptidase (SPase; LepB; leader peptidase B; leader peptidase I; EC 3.4.21.89) family members are essential membrane-bound serine proteases that function to cleave the amino-terminal signal peptide extension from proteins that are...; Region: S26_SPase_I; cd06530" /db_xref="CDD:119398" misc_feature order(770166..770168,770295..770297) /locus_tag="Acear_0708" /note="Catalytic site [active]" /db_xref="CDD:119398" gene 770865..771524 /locus_tag="Acear_0709" /db_xref="GeneID:9512734" CDS 770865..771524 /locus_tag="Acear_0709" /note="InterPro IPR006674:IPR006675; KEGG: mta:Moth_1692 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: Q2RHU5 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG" /codon_start=1 /transl_table=11 /product="metal dependent phosphohydrolase" /protein_id="YP_003827314.1" /db_xref="GI:302391494" /db_xref="GeneID:9512734" /translation="MSILEKIKEASQVTAYIKKADEHLKNIGFTEHSFRHANLVAETA ENILKKLDYSSEMAELAGAAGYLHDIGNVVNRQNHAQSSAVLASQILTDLGLDYDKIA TIMGAIGNHDEGEGQPVNNIAAALIIADKSDVHWTRVRNDDYSTFDIHDRVNYAVQQS CIEIDRTEKMITLDLEIDTEISTVMEYFEIFLTRMVMCRQAAEVLGCDFQLIINEVEL L" misc_feature 770955..771263 /locus_tag="Acear_0709" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature order(770970..770972,771066..771071,771252..771254) /locus_tag="Acear_0709" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature 771069..771071 /locus_tag="Acear_0709" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene 771633..772853 /locus_tag="Acear_0710" /db_xref="GeneID:9512735" CDS 771633..772853 /locus_tag="Acear_0710" /note="COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR001036:IPR003335:IPR005791; KEGG: hor:Hore_12260 protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: B8CXF7 protein-export membrane protein SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family" /codon_start=1 /transl_table=11 /product="protein-export membrane protein SecD" /protein_id="YP_003827315.1" /db_xref="GI:302391495" /db_xref="GeneID:9512735" /translation="MTRKNKKLLKIVGIMAAVIIAAYFLLPINEAINLGLDLQGGTHV VLEAEPTEQSKVTNDSMQRVISVINRRVNQMGLTEPVIQREGDRRIIVELPGVENPNQ AIETIGKTAQLKFKDPNGEVVMTGGHLVDAQATYGTQFNQPVIQFELDSVGKDKFAQL TKKHVGERIAIHLDEELLTNPQVQDPIPGGEGIITGYETLEEAQEDALLLRAGALPMP VKVIQNRTIGPTLGARSIDQSITAGLIGLALVALLMIILYRLSGAVATVALGIYGVIV MGTLAGLNATLTLPGIAGLILSIGMAVDANIIIFERVKQELGAGKTKRAAIKSGFERA YKTIFDANVTTLITAGILAYFGTGTIRGFAVTLSIGILASMFTAIVVTRTLVDLLLDA NLLKGQNAFGRVRR" misc_feature <771780..772769 /locus_tag="Acear_0710" /note="preprotein translocase subunit SecD; Reviewed; Region: secD; PRK05812" /db_xref="CDD:180271" misc_feature 772305..772769 /locus_tag="Acear_0710" /note="Protein export membrane protein; Region: SecD_SecF; cl14618" /db_xref="CDD:176628" gene 772860..773732 /locus_tag="Acear_0711" /db_xref="GeneID:9512736" CDS 772860..773732 /locus_tag="Acear_0711" /note="COGs: COG0341 Preprotein translocase subunit SecF; InterPro IPR003335:IPR005665; KEGG: hor:Hore_12250 protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: B8CXF6 protein-export membrane protein SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF" /codon_start=1 /transl_table=11 /product="protein translocase subunit secF" /protein_id="YP_003827316.1" /db_xref="GI:302391496" /db_xref="GeneID:9512736" /translation="MEIIGKRKIWFIISALIIIVGLGSLVMQGLNLGIDFTGGTLMEF TFDKEVTTGQIREVLAGFDLDKKSVVQNTGEMGILIRTVNLRQDEITEVQSAIKDKYS SAEMLRTEMVGPAIGSELKSKAYWALLIAAIAIVLYISYRFEFKFAIAALMALAHDVL IVIGSFSLVGEEVGSPFIAALLTVVGYSINDTIVIFDRIRETVKYRDKESFADLNNKA VLDTLPRSINTSMTTLVSILAILIFGGATIKPFMLALLIGILSGTYSSIFIASPVLVE IDAWKKRRNSKQTA" misc_feature 772863..773720 /locus_tag="Acear_0711" /note="preprotein translocase subunit SecF; Reviewed; Region: secF; PRK13022" /db_xref="CDD:183847" misc_feature 772929..773015 /locus_tag="Acear_0711" /note="SecD/SecF GG Motif; Region: Sec_GG; pfam07549" /db_xref="CDD:116168" misc_feature 773136..773690 /locus_tag="Acear_0711" /note="Protein export membrane protein; Region: SecD_SecF; cl14618" /db_xref="CDD:176628" gene 773831..774205 /locus_tag="Acear_0712" /db_xref="GeneID:9512737" CDS 773831..774205 /locus_tag="Acear_0712" /note="KEGG: hor:Hore_12240 hypothetical protein; SPTR: B8CXF5 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827317.1" /db_xref="GI:302391497" /db_xref="GeneID:9512737" /translation="MFELFKKTMVTGLGAMLFTKEKAEELVNELVEQGRINRQEAEEI IEDLVAEIEKESNETKNRMKQELRGLLDKMGLKNDEEITKLKGEIKDLELELEALKEE VEELKANKDSGKENAITEIDDE" misc_feature 773831..774097 /locus_tag="Acear_0712" /note="Poly(hydroxyalcanoate) granule associated protein (phasin); Region: Phasin; cl07863" /db_xref="CDD:195632" gene 774198..774671 /locus_tag="Acear_0713" /db_xref="GeneID:9512738" CDS 774198..774671 /locus_tag="Acear_0713" /note="InterPro IPR007403; KEGG: swo:Swol_1006 hypothetical protein; PFAM: protein of unknown function DUF456; SPTR: Q0AY84 Putative uncharacterized protein; PFAM: protein of unknown function (DUF456)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827318.1" /db_xref="GI:302391498" /db_xref="GeneID:9512738" /translation="MSKVLIIVAVIIGVLGTLLPGLPGTPIILIAGIIYGWLNGFQVI SLQLVFWLVVLSLVAEFLEYIISGFSAKRFGGSKYSILGLLIGALIGAIILGPLGILA GMFLGSIIVELILGKEVNSAVKTGIGAIIGAIGGSIFSFLISLLMAGLLLSRVFY" misc_feature 774300..>774572 /locus_tag="Acear_0713" /note="Protein of unknown function (DUF456); Region: DUF456; cl01069" /db_xref="CDD:154179" gene 774685..776364 /locus_tag="Acear_0714" /db_xref="GeneID:9512739" CDS 774685..776364 /locus_tag="Acear_0714" /note="COGs: COG0661 unusual protein kinase; InterPro IPR004147:IPR002575:IPR011009; KEGG: hor:Hore_12230 2-octaprenylphenol hydroxylase; PFAM: ABC transporter; aminoglycoside phosphotransferase; SPTR: B8CXF4 2-octaprenylphenol hydroxylase; PFAM: phosphotransferase enzyme family; ABC1 family" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003827319.1" /db_xref="GI:302391499" /db_xref="GeneID:9512739" /translation="MIGFRGLNRRYRHIQRYRKIAEVLIKNGFGYLLDSLDLYQFLPL TRRLKLDNEESEELSRAERLRLVLEELGPTFIKLGQLLSTRQDLIPQEYIKELTKLQD DVPPFSFELVLQQVEEELNQPVDDLFANIEKEPLAAASIGQVHKAVLKNGQQVVIKVQ RPEIRDIIETDLDIIFNLAEILDKRVIGDDFLDPVEIASEFNRIIKKELDYQIEGRNT EKFNRNFADEEEIKVPKIYWELSTKKLLVSEYIEGTKLSRIKSEDIDCDYKKIAQIGA NSFMKQVLVDGFFHGDPHPGNVLITPEEKVAFIDFGIVGRIDKDTMEEIADLFLAVIN RNIDKMVDKLLKLGMLTQKINRRALKRDMGELLDEYYGADLKEIDISRIINQMLNLAF KYRVQLPTDFILLGKALMTVEGIGRDLDPDFNVLAAAKPFAYQLLRKRFHPKRIFTEI FSDAKQLYHFLVHTPKQLERILKLLERQDFKIELRHIGLEELISKLDIITNRLSVSII VSALIVGSSYIMQTDKGPTLFELPALGLGGYLLAGFFGLWLVISILRSGRF" misc_feature 774898..776244 /locus_tag="Acear_0714" /note="Predicted unusual protein kinase [General function prediction only]; Region: AarF; COG0661" /db_xref="CDD:31005" misc_feature 775057..775395 /locus_tag="Acear_0714" /note="Protein Kinases, catalytic domain; Region: PKc_like; cl09925" /db_xref="CDD:195926" misc_feature 775291..775638 /locus_tag="Acear_0714" /note="Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs)...; Region: APH_ChoK_like; cd05120" /db_xref="CDD:88612" misc_feature order(775297..775299,775303..775305,775384..775386, 775426..775437,775558..775560,775570..775575, 775579..775581,775609..775614) /locus_tag="Acear_0714" /note="active site" /db_xref="CDD:88612" misc_feature order(775297..775299,775303..775305,775384..775386, 775426..775437,775558..775560,775570..775575, 775579..775581,775609..775614) /locus_tag="Acear_0714" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:88612" gene 776382..776762 /locus_tag="Acear_0715" /db_xref="GeneID:9512740" CDS 776382..776762 /locus_tag="Acear_0715" /note="KEGG: hor:Hore_12220 uncharacterized integral membrane protein; SPTR: B8CXF3 Uncharacterized integral membrane protein; PFAM: protein of unknown function (DUF1049)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827320.1" /db_xref="GI:302391500" /db_xref="GeneID:9512740" /translation="MQLILVAAFVFALIVAIFAIQNAITVQVVLFTWQFETSLVVVIF GAAILGALSVGLFGLMQYIKLKLKLRKKEQKINKLEGELAELSPAEDDNKERGLIEEE ESVENKAIEIKSEVRDEKEQENHY" misc_feature <776442..776567 /locus_tag="Acear_0715" /note="Protein of unknown function (DUF1049); Region: DUF1049; cl01539" /db_xref="CDD:194160" gene 776820..780452 /locus_tag="Acear_0716" /db_xref="GeneID:9512741" CDS 776820..780452 /locus_tag="Acear_0716" /note="COGs: COG0608 Single-stranded DNA-specific exonuclease; InterProIPR001667:IPR003156:IPR014905:IPR011545:IPR 001650:IPR014021:IPR014001:IPR004610; KEGG: cdf:CD2746 single-stranded-DNA-specific exonuclease; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; HIRAN; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: Q183I1 Putative single-stranded-DNA-specific exonuclease; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHHA1 domain; DHH family; Helicase conserved C-terminal domain; HIRAN domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; single-stranded-DNA-specific exonuclease RecJ" /codon_start=1 /transl_table=11 /product="single-stranded-DNA-specific exonuclease RecJ" /protein_id="YP_003827321.1" /db_xref="GI:302391501" /db_xref="GeneID:9512741" /translation="MILDREWKLLNRSTEEEPNLSDSLNISSVLAEILSSRGLNSKQK VENFLEVELDGLHSPFLLEGIEQAVDRISTAMESQEIIGIYGDYDVDGITSTGLLINY FQHLGVEPKYHIPNRLEEGYGLNKDAIESLAQSGVELLITVDCGISDYQEVKYANQLG IDVIITDHHEVPARIPPAEAVINAKQSNCNYPFSQLCGAGVAYKLILALADKDQQVNQ KEIKEYYLDLLAMGIVADIVPLVDENRIMVKYGLELLQNPNNLGLSALIEAVDLTETE INTGHIGYILAPRLNAAGRIGNPDLALELLITDDPSQAADIAAELEEINHRRRDIEAD IRQEAELMVEGMDLEQTKALVLASENWHSGVVGIVASDIQEKYYRPTIMIAIEDDGIG RGSARSIKGFNIYQAVKNSEDLLPKFGGHEQAAGLSIAKEDIAQFRDEINQYADDRLS DKDLTPRLKLDCEVELSELSKELVQEIDYLAPFGFGNPRPKLAVREVTVADFATVGSN GEHLKLAVTDEAGTTVECIGFNMAGFRQKLISQQEEIDLACTVEINNWQGKSELQLKL KDINFPEVSFIDQLFAKSKEIIADNYYRGIGEEDQFYTKVVGVTFEGRQELIKELKRG DKLNLVREPENEYDESAIRVETTDQEQIGYLKSGLAKHLAPYLDVGFEYQVTVSEVTG GVDKNLGVNIFIEQAGYKEAESAEEAKSCRAQLETLNRSEILNEVRQALIGDYDFRSK QKEVLTTLDNDQDTLAIFGTGRGKSAIFQSYAALQALNQGRITVILYPLRALVNDQFD SLKKNLAPLGLDIYKANGSLSVGEREKLITALNHGELDIVLTTPEFMEYHLDKFQNLA DEIGFLVVDESHHIGMASSSFRPTYKRLGKLNSKLGNPLVLAVTATANNQVAREIIET LNIGEIIIDPHVRSNLEIIDKRGCRDKEAYLYEVASSGEKSIIYVNSREQSIELASNL RQRLPGLAEEIGFYNAGLTNKERNRIESMFWSGKLKIIVSTSAFGEGIDIPDIRNIVL YHLNFNLTEFNQQSGRVGRDGKQAKIHLLFGQQDVRINEFILDSMAPEREVLVQLYCV LKQEEDTDQQIKLTNQQLAQKVSSRLQGKVRENTVSAGLGVLEDLNILTRIQEAGNRI IQLRRIPDSQLDLNDSLRYREGLEDKEAFNEFKDFILNAEAEELLSLVNQPIYPTKLV KTKGEN" misc_feature 776895..778526 /locus_tag="Acear_0716" /note="single-stranded-DNA-specific exonuclease RecJ; Region: recJ; TIGR00644" /db_xref="CDD:161976" misc_feature 777042..777521 /locus_tag="Acear_0716" /note="DHH family; Region: DHH; pfam01368" /db_xref="CDD:189957" misc_feature 777960..778148 /locus_tag="Acear_0716" /note="DHHA1 domain; Region: DHHA1; pfam02272" /db_xref="CDD:190268" misc_feature 778623..778901 /locus_tag="Acear_0716" /note="HIRAN domain; Region: HIRAN; pfam08797" /db_xref="CDD:192156" misc_feature 779073..779525 /locus_tag="Acear_0716" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature 779100..779114 /locus_tag="Acear_0716" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature 779412..779423 /locus_tag="Acear_0716" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature 779652..779996 /locus_tag="Acear_0716" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature order(779697..779708,779778..779783,779856..779864) /locus_tag="Acear_0716" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature order(779880..779882,779943..779945,779955..779957, 779964..779966) /locus_tag="Acear_0716" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene 780457..780969 /locus_tag="Acear_0717" /db_xref="GeneID:9512742" CDS 780457..780969 /locus_tag="Acear_0717" /EC_number="2.4.2.7" /note="COGs: COG0503 adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR000836:IPR005764; KEGG: amt:Amet_2352 adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: B6G1J7 Putative uncharacterized protein; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="adenine phosphoribosyltransferase" /protein_id="YP_003827322.1" /db_xref="GI:302391502" /db_xref="GeneID:9512742" /translation="MDLTDKIRVIEDFPEEGIKFKDITTLLKDIEAYQAAIDQFVDRY QDCDIDVVVGIESRGFLVGAPLALELGKSFVPARKEGKLPAEVVRAEYDLEYGTSILE LHCDAIDPGDKVLIVDDLLATGGTVEAAVSLVEELGGEVVELAFLIELSFLEGRDELT DHDIYSVIIE" misc_feature 780457..780960 /locus_tag="Acear_0717" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene 781000..783204 /locus_tag="Acear_0718" /db_xref="GeneID:9512743" CDS 781000..783204 /locus_tag="Acear_0718" /EC_number="2.7.6.5" /note="COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR012675:IPR006674:IPR007685:IPR004095:IPR 002912:IPR003607:IPR012676:IPR004811; KEGG: hor:Hore_12190 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; amino acid-binding ACT domain protein; PRIAM: GTP diphosphokinase; SMART: metal-dependent phosphohydrolase HD region; SPTR: B8CXF0 (P)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: HD domain; ACT domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family" /codon_start=1 /transl_table=11 /product="(p)ppGpp synthetase I, SpoT/RelA" /protein_id="YP_003827323.1" /db_xref="GI:302391503" /db_xref="GeneID:9512743" /translation="MIRVKEETEGAENMALEDLIEKIESYINDPDLELITKAYKFAKD AHEGQYRVSGEPFVEHPLGVALIMAELELDIISITGALLHDVVEDTEVSFAQLRNEFG EEITLLVNGVTKLSKIAFKSREEQQAESLRKMFLAMSKDIRVILIKLSDRLHNMRTLE YLSQQKQERIARETIEIYAPLAHRLGISTLKWELEDLSFKHLEPNKYYELSNKVSKNR DEREEYIDRCISKVEKRLNLEGIDAHIYGRPKHLYSIYQKMKRKNKELSEIYDLVALR VIVNDVQECYQVLGNIHEIWNPIPGRIKDYIAMPKSNMYQSLHTTVIGPKGEPLEIQI RTWDMHRTAEYGVAAHWRYKEGKKNNEKAAKKISWLRQLLEWQKDLQDATEFMETLKV DLFEDEVFVFTPQGDVISLPRDATPVDFAYNIHTEVGHSCVGAKVNDKLVPLEYKLEN GDIVEILTSKNSGPSRDWLNFIKTSRAKSKIKRWFKQQRRDEAIDKGKDSLEEKLNKY NIQFKEEEKKAKLKNIAQKLGRSSIKDLYAAIGYNKVKTSQVISKLRPEDEKKDKAPE EILKKLKEKTKTKRKSKADKGIKVKGMEGLLVRIAKCCNPVPGDEIVGYITRGRGVSI HRRDCSNIKNLLDEHEEREIEVEWNIKQETSYEVALEIEALNQHALLNDLTNVISNAQ LSITTINAQTTKDGFAHIYLVIEISSLDHMNDIMNKLNRIEGVLDVQRANPN" misc_feature 781030..783189 /locus_tag="Acear_0718" /note="Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]; Region: SpoT; COG0317" /db_xref="CDD:30665" misc_feature 781174..781467 /locus_tag="Acear_0718" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" misc_feature 781663..782034 /locus_tag="Acear_0718" /note="Nucleotidyltransferase (NT) domain of RelA- and SpoT-like ppGpp synthetases and hydrolases; Region: NT_Rel-Spo_like; cd05399" /db_xref="CDD:143389" misc_feature order(781741..781743,781747..781749,781810..781815, 781825..781827,781909..781911,781915..781917, 781930..781932,781936..781938,781942..781944, 781954..781956,781990..781992,781996..781998, 782002..782004,782026..782031) /locus_tag="Acear_0718" /note="synthetase active site [active]" /db_xref="CDD:143389" misc_feature order(781741..781743,781909..781911,781915..781917, 781930..781932,781936..781938,781942..781944, 781954..781956,781990..781992,781996..781998, 782026..782028) /locus_tag="Acear_0718" /note="NTP binding site [chemical binding]; other site" /db_xref="CDD:143389" misc_feature order(781810..781812,781990..781992) /locus_tag="Acear_0718" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143389" misc_feature 782194..782373 /locus_tag="Acear_0718" /note="TGS_RelA_SpoT: The RelA (SpoT) protein, also referred to as ppGpp hydrolase/synthetase, is a ribosome-associated protein that is activated during amino acid starvation and thought to mediate the stringent response. RelA contains a TGS domain, named...; Region: TGS_RelA_SpoT; cd01668" /db_xref="CDD:133438" misc_feature 782977..783189 /locus_tag="Acear_0718" /note="ACT domain found C-terminal of the RelA/SpoT domains; Region: ACT_RelA-SpoT; cd04876" /db_xref="CDD:153148" gene 783229..783678 /locus_tag="Acear_0719" /db_xref="GeneID:9512744" CDS 783229..783678 /locus_tag="Acear_0719" /note="COGs: COG1490 D-Tyr-tRNAtyr deacylase; InterPro IPR003732; KEGG: hor:Hore_12180 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: B8CXE9 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase" /codon_start=1 /transl_table=11 /product="D-tyrosyl-tRNA(Tyr) deacylase" /protein_id="YP_003827324.1" /db_xref="GI:302391504" /db_xref="GeneID:9512744" /translation="MRAIVQRVEDAAVRVENEVIADIDQGLLVFLGIKDGDTEEDISY LIDKIVNLRIFSNQKGKMDLSVKDLDLEVLVVPQFTLYGDCRSGKRPDFTAAASPKEA KELFKKFIDEIKETSIEVGTGEFGAMMEVDFINDGPVTIMLDSNKEF" misc_feature 783229..783663 /locus_tag="Acear_0719" /note="D-Tyrosyl-tRNAtyr deacylases; a class of tRNA-dependent hydrolases which are capable of hydrolyzing the ester bond of D-Tyrosyl-tRNA reducing the level of cellular D-Tyrosine while recycling the peptidyl-tRNA; found in bacteria and in eukaryotes but...; Region: Dtyr_deacylase; cd00563" /db_xref="CDD:29648" misc_feature order(783247..783249,783457..783471,783505..783507, 783649..783651) /locus_tag="Acear_0719" /note="putative active site [active]" /db_xref="CDD:29648" misc_feature order(783358..783360,783367..783375,783379..783390, 783457..783462,783466..783471,783475..783483, 783487..783501,783505..783507,783607..783660) /locus_tag="Acear_0719" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29648" misc_feature order(783370..783372,783385..783387,783487..783489, 783496..783498) /locus_tag="Acear_0719" /note="putative tRNAtyr binding site [nucleotide binding]; other site" /db_xref="CDD:29648" gene 783711..784331 /locus_tag="Acear_0720" /db_xref="GeneID:9512745" CDS 783711..784331 /locus_tag="Acear_0720" /note="COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: mta:Moth_1678 beta-lactamase-like; SPTR: Q2RHV9 Beta-lactamase-like; PFAM: Metallo-beta-lactamase superfamily" /codon_start=1 /transl_table=11 /product="beta-lactamase" /protein_id="YP_003827325.1" /db_xref="GI:302391505" /db_xref="GeneID:9512745" /translation="MIVKKIPVGSLGANCYMLGDEESGKAIVIDPGAEGAKILDLVNE LSLELKYIVNTHGHYDHIGANQFLLQKSQSKLLIHQDDSEFLVDPKKNLSSLSISGKI EGPKADRLLTEGDEISCGKWELEVIHTPGHTPGGITLLGNGKLFVGDTIFARGVGRTD FPYGSKEVLMESIQEKLLPLADELEVFPGHGPKGKLGEIKASNPFL" misc_feature 783711..784325 /locus_tag="Acear_0720" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" gene 784424..785638 /locus_tag="Acear_0721" /db_xref="GeneID:9512746" CDS 784424..785638 /locus_tag="Acear_0721" /note="InterPro IPR011990:IPR001440:IPR019734:IPR013026; KEGG: hor:Hore_12160 peptidyl-prolyl cis-trans isomerase; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: B8CXE7 peptidyl-prolyl cis-trans isomerase; PFAM: SurA N-terminal domain; Tetratricopeptide repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827326.1" /db_xref="GI:302391506" /db_xref="GeneID:9512746" /translation="MIFDNLRNNSRILIYIVIIAFVGGGVLVGLSGYFNGSNSNAQSQ NQTAHAQQQNIAVVNDKPIRYQDFQRGLQRFQQQSQRPIGNSQVLALKNRVLQQMIDQ ELLLQKAKEENITVNISDQEVETQLDNWIKNTGRSRKEIENLLSDRGSSIAQVKKQLK EGMHKQKLINRMVQQAQDGVEVTEKELKDAYEKSTEKEAAGEEFTKIKPKLRKKLKQQ KKKQAISQMVNNYREEADIEINSVEIKAYRAAQNENYDEAVAGYKNALDQGNKEAYIY SGLAQVYQQQDKTDKAIETYKKAIEKSPKDSQMKLALGNLYQQAGKEDKAVKQLDKVA ESAGNNLLLHYRLQSLYKKMGYEEKAKAEMEKVKELQKKAAKKQKALQKKAKEQQKES EEQESKEEENNK" misc_feature <784679..>785014 /locus_tag="Acear_0721" /note="peptidylprolyl isomerase; Provisional; Region: prsA; PRK00059" /db_xref="CDD:178832" misc_feature 785156..785428 /locus_tag="Acear_0721" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature order(785159..785161,785195..785197,785207..785209, 785216..785218,785261..785263,785297..785299, 785309..785311,785318..785320,785363..785365, 785399..785401,785411..785413,785420..785422) /locus_tag="Acear_0721" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature order(785162..785167,785252..785257,785261..785266, 785273..785278,785354..785359,785366..785371, 785378..785383) /locus_tag="Acear_0721" /note="binding surface" /db_xref="CDD:29151" gene 785666..786928 /locus_tag="Acear_0722" /db_xref="GeneID:9512747" CDS 785666..786928 /locus_tag="Acear_0722" /EC_number="6.1.1.21" /note="COGs: COG0124 Histidyl-tRNA synthetase; InterProIPR004516:IPR004154:IPR002314:IPR006195:IPR 015807; KEGG: hor:Hore_12150 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: B8CXE6 Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="histidyl-tRNA synthetase" /protein_id="YP_003827327.1" /db_xref="GI:302391507" /db_xref="GeneID:9512747" /translation="MSIKKPRGTNDILPEDSLKWQYIEDTARDICTRYNYEEIRTPIF ENTDLFQRGIGEATDIVEKEMYTFNDKGGRSITLRPEGTASVVRAFLEHKIYGQAQPT KYFYYGPMFRYERPQSGRYRQFHQMGVEVLGTDSPAIDAEVISLGLQILKELGLSDLE VHLNSVGCPVCREDYREELRDHFADDLEELCSDCQSRYDRNPLRILDCKNEKCQEYTA DAPEIIDSLCEDCADHFKEVQNYLQRLDIDYIIDSSLVRGLDYYTKTAFEIMYTGLGA QDTIFGGGRYDGLAEEIGGREIPGIGFAMGMERIILALEEQDVDLPLTTDLDLFITTI GQPAKETAFEYLYQLRQAGLKVEMDYLGRSVKGQMKCADRTNAQYSIILGGNELEKGT ATVRNMETGEETEIKLNNLVEEMNELIA" misc_feature 785666..786925 /locus_tag="Acear_0722" /note="histidyl-tRNA synthetase; Reviewed; Region: hisS; PRK00037" /db_xref="CDD:178812" misc_feature 785711..786610 /locus_tag="Acear_0722" /note="Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain. HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent...; Region: HisRS-like_core; cd00773" /db_xref="CDD:73226" misc_feature order(785726..785728,785762..785764,785777..785797, 785867..785872,785906..785908,785912..785914, 785927..785932,785939..785944,786029..786034, 786053..786055,786077..786079,786089..786091, 786098..786100,786515..786517,786569..786574) /locus_tag="Acear_0722" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73226" misc_feature 785771..785797 /locus_tag="Acear_0722" /note="motif 1; other site" /db_xref="CDD:73226" misc_feature order(785906..785908,785912..785914,785999..786001, 786005..786007,786026..786028,786035..786037, 786041..786043,786053..786055,786434..786436, 786440..786442,786446..786451,786500..786502, 786515..786517,786572..786574,786581..786583, 786590..786592) /locus_tag="Acear_0722" /note="active site" /db_xref="CDD:73226" misc_feature 785996..786010 /locus_tag="Acear_0722" /note="motif 2; other site" /db_xref="CDD:73226" misc_feature order(786569..786583,786590..786592) /locus_tag="Acear_0722" /note="motif 3; other site" /db_xref="CDD:73226" misc_feature 786665..786910 /locus_tag="Acear_0722" /note="HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is...; Region: HisRS_anticodon; cd00859" /db_xref="CDD:29799" misc_feature order(786665..786670,786773..786775,786791..786793, 786815..786817,786845..786847,786851..786853) /locus_tag="Acear_0722" /note="anticodon binding site; other site" /db_xref="CDD:29799" gene 786947..788737 /locus_tag="Acear_0723" /db_xref="GeneID:9512748" CDS 786947..788737 /locus_tag="Acear_0723" /EC_number="6.1.1.12" /note="COGs: COG0173 Aspartyl-tRNA synthetase; InterProIPR002312:IPR012340:IPR004365:IPR004364:IPR 004115:IPR006195:IPR016027:IPR004524; KEGG: hor:Hore_12140 aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; SPTR: B8CXE5 Aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type" /codon_start=1 /transl_table=11 /product="aspartyl-tRNA synthetase" /protein_id="YP_003827328.1" /db_xref="GI:302391508" /db_xref="GeneID:9512748" /translation="MTAMKDLERDYYCGELSSEEIDEEVTLMGWVQRRRDHGGLIFVD LRDRFGLVQVVFSPQEAKEAFEKAEDLRKEYVIAVTGKVARRPEGTINPELATGEIEV NVKEIEILSEADTPPLQIAEDSEVGEDLRLKYRYLDLRRPNMQENIILRHQVKKAVRN YLDEEDFLEIETPMLTKSTPEGARDYLVPSRVHRGKFYALPQSPQLFKQLLMVSGMER YYQITRCFRDEDLRADRQPEFTQIDMEMSFVDEDDVISLVEGMIQEIFATAGLEEPTD FAHMSYQEAMDRFGTDRPDLRFGLELVDVSEIVEDSEFNVFSGTIADGGEVKGINAKG CADFSRKDLDDLTDYVGNYGAQGLAWIALREDGISSPISKFLSDEELEEIQNEMEAEE GDLLLFVADRPKVVAAALGHLRLKLAQRLDLIDQDEFNFVWITDFPLLERDEDEDRLV SLHHPFTAPQDEDIDLLDSKPTEVKAKAYDLVLNGTEIGGGSIRIHDRDLQEKIFENL SLTDEEIDNKFGFLLEAFDYGTPPHGGIAFGLDRLVMLLGKLETIRDVIAFPKTQNAT CLLTEAPSRVAEEQLEELNLKVQDDEVEVN" misc_feature 786971..788722 /locus_tag="Acear_0723" /note="aspartyl-tRNA synthetase; Validated; Region: aspS; PRK00476" /db_xref="CDD:179042" misc_feature 786971..787330 /locus_tag="Acear_0723" /note="EcAspRS_like_N: N-terminal, anticodon recognition domain of the type found in Escherichia coli aspartyl-tRNA synthetase (AspRS), the human mitochondrial (mt) AspRS-2, the discriminating (D) Thermus thermophilus AspRS-1, and the nondiscriminating (ND)...; Region: EcAspRS_like_N; cd04317" /db_xref="CDD:58587" misc_feature order(786971..786973,786980..786982,787034..787036, 787088..787090,787277..787279,787283..787288) /locus_tag="Acear_0723" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:58587" misc_feature order(787043..787045,787049..787057,787070..787072, 787103..787105,787160..787162,787202..787204, 787220..787222,787247..787249,787295..787297) /locus_tag="Acear_0723" /note="anticodon binding site; other site" /db_xref="CDD:58587" misc_feature 787388..>787816 /locus_tag="Acear_0723" /note="Asp tRNA synthetase (aspRS) class II core domain. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. AspRS is a homodimer, which attaches a specific amino acid to the 3' OH group of ribose of the...; Region: AspRS_core; cd00777" /db_xref="CDD:73228" misc_feature order(787397..787405,787412..787414,787421..787426, 787433..787435,787442..787453,787457..787477, 787496..787498,787505..787519,787529..787540, 787583..787588,787595..787600,787616..787618, 787628..787630,787658..787660,787688..787690, 787703..787705) /locus_tag="Acear_0723" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:73228" misc_feature 787463..787477 /locus_tag="Acear_0723" /note="motif 1; other site" /db_xref="CDD:73228" misc_feature order(787487..787495,787553..787555,787559..787561, 787568..787570,787625..787627,787631..787633, 787646..787654,787661..787663,787667..787669) /locus_tag="Acear_0723" /note="active site" /db_xref="CDD:73228" misc_feature 787622..787633 /locus_tag="Acear_0723" /note="motif 2; other site" /db_xref="CDD:73228" misc_feature 787895..788176 /locus_tag="Acear_0723" /note="GAD domain; Region: GAD; pfam02938" /db_xref="CDD:145868" misc_feature <788231..788638 /locus_tag="Acear_0723" /note="Asp tRNA synthetase (aspRS) class II core domain. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. AspRS is a homodimer, which attaches a specific amino acid to the 3' OH group of ribose of the...; Region: AspRS_core; cd00777" /db_xref="CDD:73228" misc_feature 788561..788572 /locus_tag="Acear_0723" /note="motif 3; other site" /db_xref="CDD:73228" gene 788834..789014 /locus_tag="Acear_R0054" /db_xref="GeneID:9512749" ncRNA 788834..789014 /locus_tag="Acear_R0054" /ncRNA_class="other" /product="6S RNA" /db_xref="GeneID:9512749" gene 789128..789715 /locus_tag="Acear_0724" /db_xref="GeneID:9512750" CDS 789128..789715 /locus_tag="Acear_0724" /note="COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: dae:Dtox_3509 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: C1TBY9 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase" /codon_start=1 /transl_table=11 /product="5-formyltetrahydrofolate cyclo-ligase" /protein_id="YP_003827329.1" /db_xref="GI:302391509" /db_xref="GeneID:9512750" /translation="MSAQEVGITKQEQREEVMNYRQRLTDKELLDKSMEIKKKLFELD EFIEAEVIMFYVDFRNEVKTEFMIKEALNDGKRVVIPISQVEDRSLLLSELKDYDQEL ETGTYDILEPREEYIRPVEHSELDLVTVPGVAFDEDCNRLGYGGGYYDRFSAGLDPDV DRIALAFEIQIVDQVVTDEHDLPVDKVLTEKRVIT" misc_feature 789155..789697 /locus_tag="Acear_0724" /note="5-formyltetrahydrofolate cyclo-ligase family; Region: 5-FTHF_cyc-lig; cl00360" /db_xref="CDD:193786" gene 790323..791642 /locus_tag="Acear_0725" /db_xref="GeneID:9512751" CDS 790323..791642 /locus_tag="Acear_0725" /note="COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003959:IPR003593; KEGG: hor:Hore_12030 ATPase AAA; PFAM: ATPase AAA; SMART: AAA ATPase; SPTR: B8CXD4 ATPase AAA; PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus" /codon_start=1 /transl_table=11 /product="recombination protein MgsA" /protein_id="YP_003827330.1" /db_xref="GI:302391510" /db_xref="GeneID:9512751" /translation="MDLFTHSSQEELDASAPLADRMRPTTLDDFFGQEEIVGPDRLLR RAIKADRIQSLILYGPPGTGKTTLAMIIANTTSSEFERLNAVTSGIKDIREIIKQAKE RRRMYQTKTILFIDEIHRFNKSQQDALLPAVEKGIIILIGATTENPYFEVNSPLVSRS RVFELKPLTKDNLKQILLKALDDTEQGLGDYKVDVTQEALEHIAEMANGDARIALNAL ELAVLTTPENGTGIKEITLKVAEESIQQRSLDYDKTGDNHYDTVSAFIKSMRGSDPDA TLYWLARMIEAGEDPKFIARRILVHAAEDVGNADPQALTVATSTARAVEYIGLPEARI PLAQAAVYIATAPKSNSAIKGIDQALKAVRSETVSGIPNHLKDTHYQEAEKLDRGIGY KYPYNYPQNYVKQQYLPDELAKKRFYKPENQGYEKKIKKFLDELKKD" misc_feature 790371..791597 /locus_tag="Acear_0725" /note="recombination factor protein RarA; Reviewed; Region: PRK13342" /db_xref="CDD:183986" misc_feature 790413..790799 /locus_tag="Acear_0725" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 790497..790520 /locus_tag="Acear_0725" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(790500..790523,790668..790670,790755..790757) /locus_tag="Acear_0725" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 790656..790673 /locus_tag="Acear_0725" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 790797..790799 /locus_tag="Acear_0725" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 791133..791597 /locus_tag="Acear_0725" /note="MgsA AAA+ ATPase C terminal; Region: MgsA_C; cl13440" /db_xref="CDD:196613" gene 791666..792292 /locus_tag="Acear_0726" /db_xref="GeneID:9512752" CDS 791666..792292 /locus_tag="Acear_0726" /note="COGs: COG1739 conserved hypothetical protein; InterProIPR000640:IPR001498:IPR015269:IPR020568:IPR 009022; KEGG: hor:Hore_12020 conserved hypothetical protein TIGR00257; PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; elongation factor G domain protein; SPTR: C0GDM3 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: conserved hypothetical protein TIGR00257" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827331.1" /db_xref="GI:302391511" /db_xref="GeneID:9512752" /translation="MQDKYKTIAENYRVQLKIDKCTFVVSAANVQTVKGAEDFIARVA EEFPDVKHNDVYAFKIGLGSNSIEKASDAGEPAGSAGPPLLQAINGAEITNVVIVVTR YFGGKHGIGGLIRAYGKCGREVIKEAGVIEKERHLTIGIGVPYDSMGKVINDLEGHHG KIKDTKYTNDGVEVIAVMKPSYLEEFKERITEITGGQAEFRQLEEEFR" misc_feature 791669..792277 /locus_tag="Acear_0726" /note="Uncharacterized conserved protein [Function unknown]; Region: COG1739" /db_xref="CDD:31925" misc_feature 791717..792043 /locus_tag="Acear_0726" /note="Uncharacterized protein family UPF0029; Region: UPF0029; pfam01205" /db_xref="CDD:189888" misc_feature 792092..792253 /locus_tag="Acear_0726" /note="Domain of unknown function (DUF1949); Region: DUF1949; pfam09186" /db_xref="CDD:150017" gene 792307..792921 /locus_tag="Acear_0727" /db_xref="GeneID:9512753" CDS 792307..792921 /locus_tag="Acear_0727" /note="COGs: COG2364 membrane protein; InterPro IPR003740; KEGG: bbe:BBR47_28180 hypothetical protein; PFAM: protein of unknown function DUF161; SPTR: C0ZDD6 Conserved hypothetical membrane protein; PFAM: Uncharacterized BCR, YitT family COG1284" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827332.1" /db_xref="GI:302391512" /db_xref="GeneID:9512753" /translation="MEELKKWSRFILGLSIVSIGIVLIIKADLGVAPWDVFHIGLTKQ FELTIGRAGQLTGGVIILFSYLLGGIKPKIGTVLNMLVVGFMIDGVMLVIPKPPVGQI FQYLYLFFGIIIFGIGVGMYISAHCGTGPRDSLMMALDYKLRFNIGLIRNGMEVLVLL IGYCLGGPVGIGTFCFALGVGPVVKFSLDLMDRFDNFSSVGTEY" misc_feature 792382..792888 /locus_tag="Acear_0727" /note="Predicted membrane protein [Function unknown]; Region: COG2364" /db_xref="CDD:32511" gene 793083..793544 /locus_tag="Acear_0728" /db_xref="GeneID:9512754" CDS 793083..793544 /locus_tag="Acear_0728" /note="COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: mta:Moth_1653 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: Q2RHY4 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: transcriptional regulator; TIGRFAM: rrf2 family protein ( transcriptional regulator)" /codon_start=1 /transl_table=11 /product="BadM/Rrf2 family transcriptional regulator" /protein_id="YP_003827333.1" /db_xref="GI:302391513" /db_xref="GeneID:9512754" /translation="MKLSTKGRYGVRAMVDLALHYDDQGATPLNSIAERQNISEHYLE QLIATLRKAGLVNSVRGAYGGYLLARKPAEITVKDIIQELEGPIAPSECVAKESESSC ENIESCITRLIWKKLRNSINEVLNSITLEDLRQEAINAKQEGEHHGYSYHI" misc_feature 793083..793481 /locus_tag="Acear_0728" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 793083..793481 /locus_tag="Acear_0728" /note="Rrf2 family protein; Region: rrf2_super; TIGR00738" /db_xref="CDD:129821" gene 793569..794741 /locus_tag="Acear_0729" /db_xref="GeneID:9512755" CDS 793569..794741 /locus_tag="Acear_0729" /EC_number="2.8.1.7" /note="COGs: COG1104 cysteine sulfinate desulfinase/cysteine desulfurase; InterProIPR016454:IPR020578:IPR015421:IPR000192:IPR 015424:IPR017772; KEGG: hor:Hore_08880 aminotransferase class V; PFAM: aminotransferase class V; PRIAM: cysteine desulfurase; SPTR: B8CWH5 Aminotransferase class V; TIGRFAM: cysteine desulfurase NifS; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS" /codon_start=1 /transl_table=11 /product="cysteine desulfurase NifS" /protein_id="YP_003827334.1" /db_xref="GI:302391514" /db_xref="GeneID:9512755" /translation="MEKVYLDNAATTPVAPEVKEAIEPYLAEKFGNASSVHSFGREVR EKVEAVREEVAELIGADDPEEVIFTSGGTEADNLSIKGIAMENRDKGQHIITSSIEHH AVLHPCEYLEEYHDFDVTYLPVDEDGLVDPADVAEAITDETILVTIMLANNEVGTIQP IAEIGEILKDKDIYFHTDAVQAVGSIPVDVNELQVDLLSLSAHKFNGPKGIGACYIRK GTEIIPFMHGGAQERGLRASTENVPGIVGLGKAAELAAENLEEKQKKITELRDRLING IKENIDEVILNGHPTKRLPNNVNVSIRYIEGESLLLNLDLEGIAASSGSACTSGSLDP SHVLLAMDIPHEIAHGSLRLTLGKYTTEEEIDYALERLSKVVDKLRAMSPIYNKAK" misc_feature 793578..794702 /locus_tag="Acear_0729" /note="Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]; Region: csdA; COG0520" /db_xref="CDD:30866" misc_feature 793578..794447 /locus_tag="Acear_0729" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl00321" /db_xref="CDD:193768" misc_feature order(793782..793787,793794..793796,794016..794018, 794100..794102,794109..794111,794169..794171, 794178..794180) /locus_tag="Acear_0729" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99742" misc_feature 794178..794180 /locus_tag="Acear_0729" /note="catalytic residue [active]" /db_xref="CDD:99742" gene 794787..795191 /locus_tag="Acear_0730" /db_xref="GeneID:9512756" CDS 794787..795191 /locus_tag="Acear_0730" /note="COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871:IPR017787; KEGG: mta:Moth_1651 nitrogen-fixing NifU-like; PFAM: nitrogen-fixing NifU domain protein; SPTR: Q2RHY6 Nitrogen-fixing NifU-like; TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold IscU; FeS cluster assembly scaffold protein NifU, Clostridium type" /codon_start=1 /transl_table=11 /product="FeS cluster assembly scaffold protein NifU" /protein_id="YP_003827335.1" /db_xref="GI:302391515" /db_xref="GeneID:9512756" /translation="MYSDKVMDHFQNPRNVGEIEDADGVGEVGNPTCGDIMKMYITVE DDVITDIKFKTFGCGAAIATSSITTEMVKGKTLDEAEELTNSEVAEALDGLPPEKMHC SNLAADALQNAINNYKGIEDDDVCTHCEDISH" misc_feature 794787..795125 /locus_tag="Acear_0730" /note="Iron-sulfur cluster scaffold-like proteins; Region: IscU_like; cd06664" /db_xref="CDD:143480" misc_feature order(794787..794798,794805..794810,794883..794888, 794958..794960,794964..794966,795078..795083, 795087..795092) /locus_tag="Acear_0730" /note="trimerization site [polypeptide binding]; other site" /db_xref="CDD:143480" misc_feature order(794883..794885,794958..794960,795090..795092) /locus_tag="Acear_0730" /note="active site" /db_xref="CDD:143480" gene 795215..795325 /locus_tag="Acear_0731" /db_xref="GeneID:9512757" CDS 795215..795325 /locus_tag="Acear_0731" /note="InterPro IPR018318; PFAM: tRNA methyl transferase-like; PFAM: tRNA methyl transferase" /codon_start=1 /transl_table=11 /product="tRNA methyl transferase" /protein_id="YP_003827336.1" /db_xref="GI:302391516" /db_xref="GeneID:9512757" /translation="MTDKKVMVAMSGGVDSSLTAALLNFSLTKELIDDKL" misc_feature 795227..>795283 /locus_tag="Acear_0731" /note="Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide; Region: AANH_like; cl00292" /db_xref="CDD:193753" misc_feature order(795239..795244,795251..795262) /locus_tag="Acear_0731" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:73291" gene 795731..797255 /locus_tag="Acear_R0055" /db_xref="GeneID:9512758" rRNA 795731..797255 /locus_tag="Acear_R0055" /product="16S ribosomal RNA" /db_xref="GeneID:9512758" gene 797374..800325 /locus_tag="Acear_R0056" /db_xref="GeneID:9512759" rRNA 797374..800325 /locus_tag="Acear_R0056" /product="23S ribosomal RNA" /db_xref="GeneID:9512759" gene 800437..800553 /locus_tag="Acear_R0058" /db_xref="GeneID:9512760" rRNA 800437..800553 /locus_tag="Acear_R0058" /product="5S ribosomal RNA" /db_xref="GeneID:9512760" gene 800580..800653 /locus_tag="Acear_R0059" /db_xref="GeneID:9512761" tRNA 800580..800653 /locus_tag="Acear_R0059" /product="tRNA-Gln" /db_xref="GeneID:9512761" gene 800663..800738 /locus_tag="Acear_R0060" /db_xref="GeneID:9512762" tRNA 800663..800738 /locus_tag="Acear_R0060" /product="tRNA-Glu" /db_xref="GeneID:9512762" gene 800856..800931 /locus_tag="Acear_R0061" /db_xref="GeneID:9512763" tRNA 800856..800931 /locus_tag="Acear_R0061" /product="tRNA-Val" /db_xref="GeneID:9512763" gene 800937..801014 /locus_tag="Acear_R0062" /db_xref="GeneID:9512764" tRNA 800937..801014 /locus_tag="Acear_R0062" /product="tRNA-Asp" /db_xref="GeneID:9512764" gene 801018..801093 /locus_tag="Acear_R0063" /db_xref="GeneID:9512765" tRNA 801018..801093 /locus_tag="Acear_R0063" /product="tRNA-Thr" /db_xref="GeneID:9512765" gene 801102..801177 /locus_tag="Acear_R0064" /db_xref="GeneID:9512766" tRNA 801102..801177 /locus_tag="Acear_R0064" /product="tRNA-Lys" /db_xref="GeneID:9512766" gene 801195..801271 /locus_tag="Acear_R0065" /db_xref="GeneID:9512767" tRNA 801195..801271 /locus_tag="Acear_R0065" /product="tRNA-Met" /db_xref="GeneID:9512767" gene 801329..801404 /locus_tag="Acear_R0066" /db_xref="GeneID:9512768" tRNA 801329..801404 /locus_tag="Acear_R0066" /product="tRNA-Phe" /db_xref="GeneID:9512768" gene 801421..801506 /locus_tag="Acear_R0067" /db_xref="GeneID:9512769" tRNA 801421..801506 /locus_tag="Acear_R0067" /product="tRNA-Leu" /db_xref="GeneID:9512769" gene 801517..801593 /locus_tag="Acear_R0068" /db_xref="GeneID:9512770" tRNA 801517..801593 /locus_tag="Acear_R0068" /product="tRNA-Gly" /db_xref="GeneID:9512770" gene 801602..801678 /locus_tag="Acear_R0069" /db_xref="GeneID:9512771" tRNA 801602..801678 /locus_tag="Acear_R0069" /product="tRNA-Arg" /db_xref="GeneID:9512771" gene 801692..801768 /locus_tag="Acear_R0070" /db_xref="GeneID:9512772" tRNA 801692..801768 /locus_tag="Acear_R0070" /product="tRNA-His" /db_xref="GeneID:9512772" gene 801936..802691 /locus_tag="Acear_0732" /db_xref="GeneID:9512773" CDS 801936..802691 /locus_tag="Acear_0732" /note="COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterProIPR011990:IPR001440:IPR013105:IPR019734:IPR 013026; KEGG: hor:Hore_10800 TPR repeat-containing protein; PFAM: hypothetical protein; TPR repeat-containing protein; SPTR: B8CX15 TPR repeat-containing protein; PFAM: Proline dehydrogenase; Tetratricopeptide repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827337.1" /db_xref="GI:302391517" /db_xref="GeneID:9512773" /translation="MINRRSKFIIISLIVINLLCTGFVATASSSNKEVSNYKLGLKHF RAGDYQSAVPKLAAAISENPDLMYPHYILGLTYYRLDKYKFAETQLKKAHEIKPEHYR VMVNLGRVYLKQDKIDQAIEITKQAIETNQKIDDAYNVLGRAYRKAEKIKEAIDSFKK AVELNDENYYVLNNLGYTYIQTNQYKEAISVLKQAVALNPGIPYLYNNLGFAYENVDE LKKAKKAYEEALAVDSTYQKAEVNLERVKRLLK" misc_feature 802044..802334 /locus_tag="Acear_0732" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature order(802044..802049,802056..802061,802146..802151, 802155..802160,802167..802172,802248..802253, 802260..802265,802272..802277) /locus_tag="Acear_0732" /note="binding surface" /db_xref="CDD:29151" misc_feature order(802053..802055,802089..802091,802101..802103, 802110..802112,802155..802157,802191..802193, 802203..802205,802212..802214,802257..802259, 802293..802295,802305..802307,802314..802316) /locus_tag="Acear_0732" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature 802251..802535 /locus_tag="Acear_0732" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature order(802251..802253,802260..802265,802350..802355, 802359..802364,802371..802376,802452..802457, 802464..802469,802476..802481) /locus_tag="Acear_0732" /note="binding surface" /db_xref="CDD:29151" misc_feature order(802257..802259,802293..802295,802305..802307, 802314..802316,802359..802361,802395..802397, 802407..802409,802416..802418,802461..802463, 802497..802499,802509..802511,802518..802520) /locus_tag="Acear_0732" /note="TPR motif; other site" /db_xref="CDD:29151" gene 802979..803941 /locus_tag="Acear_0733" /db_xref="GeneID:9512774" CDS 802979..803941 /locus_tag="Acear_0733" /note="KEGG: acl:ACL_1055 hypothetical protein; SPTR: A9NH35 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827338.1" /db_xref="GI:302391518" /db_xref="GeneID:9512774" /translation="MNNKYSFLLGAGASVPAGIPPLEQLYELYVENLTKREIDLISLM EDRFAKDDYNFNLKLLLKILNLFKELDQEPIKSLFINTDNELINNLDLVSTMIKKLKR LIRKECTVEKSNIDYLLPLRRFIYNIDSLQVFTLNYDLLIETLCELYQINYTDGFRLT WQPDLLEDKSFDLRLYKLHGSSMWYETEDERKLKIPVTNYDGKLEYFLGTELSNLLVY PKKNSCEPFQKLLHYFGLHLLETEILICIGYSFGDSLIKQQVLEGLKNNPQLHIYLVS PHAEQTLEEHFSCYKERITFFNLGIEEALADDFLYFKVHDFRNE" misc_feature 802985..803857 /locus_tag="Acear_0733" /note="SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+...; Region: SIR2; cl00195" /db_xref="CDD:193702" gene 803967..804254 /locus_tag="Acear_0734" /db_xref="GeneID:9512775" CDS 803967..804254 /locus_tag="Acear_0734" /note="InterPro IPR005642; KEGG: drm:Dred_2329 hypothetical protein; PFAM: protein of unknown function DUF340 membrane; SPTR: A4J6Y6 Putative uncharacterized protein; PFAM: Membrane protein of unknown function (DUF340)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827339.1" /db_xref="GI:302391519" /db_xref="GeneID:9512775" /translation="MALIILSLLLGLLIGYFEILPNKLSSLTDELITIGLVLLLFSMG AEMGLNDKIISNLDKLGFQALALAVGSIAGSLSLIKLIEGMIIDFGKEDKN" misc_feature 804042..>804194 /locus_tag="Acear_0734" /note="Membrane protein of unknown function (DUF340); Region: DUF340; cl01028" /db_xref="CDD:194012" gene 804257..804853 /locus_tag="Acear_0735" /db_xref="GeneID:9512776" CDS 804257..804853 /locus_tag="Acear_0735" /note="COGs: COG2431 membrane protein; InterPro IPR005642; KEGG: drm:Dred_2328 protein of unknown function DUF340, membrane; PFAM: protein of unknown function DUF340 membrane; SPTR: A4J6Y5 Putative uncharacterized protein; PFAM: Membrane protein of unknown function (DUF340)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827340.1" /db_xref="GI:302391520" /db_xref="GeneID:9512776" /translation="MTILIILSVVGGILAGQFFLPQQIASILDQTTMYFLALLLLGIG IDIGQKKEVITKIKKMGWRIILVPLMIGVGSIIGAILSGWLLALPLNESSAIGAGFGW YSLSGVLITEIYDVQIGSLAFLTNVFRELLAVILIPILAKRKTSLTLIAPGGATTMDT TLPLIVKSSTSKLGIIAFISGAVLSFLVPVLVPLLIKL" misc_feature <804407..804802 /locus_tag="Acear_0735" /note="Membrane protein of unknown function (DUF340); Region: DUF340; cl01028" /db_xref="CDD:194012" gene complement(804872..804991) /locus_tag="Acear_0736" /db_xref="GeneID:9512777" CDS complement(804872..804991) /locus_tag="Acear_0736" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827341.1" /db_xref="GI:302391521" /db_xref="GeneID:9512777" /translation="MKIDFFFAWSKNEEDDLKSWGGGFKLPSFLKWIKGILKR" gene 805789..805935 /locus_tag="Acear_0737" /db_xref="GeneID:9512778" CDS 805789..805935 /locus_tag="Acear_0737" /note="COGs: COG2001 conserved hypothetical protein; InterPro IPR003444:IPR020603; KEGG: hor:Hore_09000 MraZ protein; PFAM: MraZ domain; SPTR: B8CWI7 protein mraZ; PFAM: MraZ protein" /codon_start=1 /transl_table=11 /product="MraZ domain protein" /protein_id="YP_003827342.1" /db_xref="GI:302391522" /db_xref="GeneID:9512778" /translation="MLMGEYVHAMDKKGRVIIPSKFRKELGNKFVVTRGLDECLFIYP MVGI" misc_feature 805789..>805926 /locus_tag="Acear_0737" /note="MraZ protein; Region: MraZ; pfam02381" /db_xref="CDD:111290" gene 805962..806897 /locus_tag="Acear_0738" /db_xref="GeneID:9512779" CDS 805962..806897 /locus_tag="Acear_0738" /note="COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; InterPro IPR002903; KEGG: aoe:Clos_1371 S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; SPTR: A8MH28 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW" /codon_start=1 /transl_table=11 /product="S-adenosyl-methyltransferase MraW" /protein_id="YP_003827343.1" /db_xref="GI:302391523" /db_xref="GeneID:9512779" /translation="MDFEHIPVLLTETIELLDCKEDGIYVDCTVGGGGHAVEIADKLT TDGTLIGIDQDLAAIEAAKESLSNAECKVELVRDNYKNIDRVLNRFGIDSVDGLLFDL GFSSHQIDTAQRGFSYQYEAPLDMRMDQRASRTAADLVNDLSQSELTDIIAEYGEEKW ASRIAEFIVRYRQDKPFKLTTELVETIKAAIPAGARRSGPHPAKRTFQALRIAVNNEL EVLTKTLDKIVPLLKSGGRMAFITFHSLEDRIVKHKFKELAQDCICPPDFPVCACDEE AEVEIITKKPITAQQKEIDDNPRARSAKLRAAEKL" misc_feature 805962..806894 /locus_tag="Acear_0738" /note="Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane]; Region: COG0275" /db_xref="CDD:30623" misc_feature 805968..806894 /locus_tag="Acear_0738" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene 806921..807448 /locus_tag="Acear_0739" /db_xref="GeneID:9512780" CDS 806921..807448 /locus_tag="Acear_0739" /note="InterPro IPR007060; KEGG: hor:Hore_09020 septum formation initiator; PFAM: Septum formation initiator; SPTR: B8CWI9 Septum formation initiator; PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL" /codon_start=1 /transl_table=11 /product="Septum formation initiator" /protein_id="YP_003827344.1" /db_xref="GI:302391524" /db_xref="GeneID:9512780" /translation="MNKVIVVEKKTKDYKKINSTASNKEKQQRQQKSSNNNKSDSILI YMIIGILITLITVIFSILYINKYVELSKINLKINQVEKEIETLTAKKQKLKLKISQNK SLSRVEKVAKNELGMIKAEDIEYIAMGQQEMSNIKNKPSVDSTVNRFRLSRLSRKVIS WLQGLTEVEAGTLEE" gene 807506..809587 /locus_tag="Acear_0740" /db_xref="GeneID:9512781" CDS 807506..809587 /locus_tag="Acear_0740" /EC_number="2.4.1.129" /note="COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterProIPR005311:IPR001460:IPR005543:IPR012338:IPR 011927; KEGG: hor:Hore_09030 stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; PRIAM: peptidoglycan glycosyltransferase; SMART: PASTA domain containing protein; SPTR: B8CWJ0 Stage V sporulation protein D; TIGRFAM: stage V sporulation protein D; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding protein dimerisation domain; PASTA domain; TIGRFAM: stage V sporulation protein D" /codon_start=1 /transl_table=11 /product="stage V sporulation protein D" /protein_id="YP_003827345.1" /db_xref="GI:302391525" /db_xref="GeneID:9512781" /translation="MGESKLQVRKRILILFLIVVFVMLGIILRLAWIQIFNNELYQSK ALNQRLRKLKVEPRRGIIYDKNGEELAISGSSQTVVAVPAEIEDPSKVADKLTLILDM ERSEIYKKITKSAYAVYLERKISEKKAAQIKSLDLSGITFTEETKRFYPKGDLAAHIL GFAGIDNQGLNGIELAYDQVLRGEPGRIMIEKDATGRMMPRGVEQYLDPTDGNNLYLT IDHVVQYIAERELEKALRGNEAEGGTIIVMNPQTGGVLALANRPTYNPNHFAKYSPGR WRNSAISDSYEPGSTFKIVTMSAALEEGVVNLEDQFFDPGYIKVEGERIKCWKNGGHG KQTFAEVVANSCNPGFVQIGQRVGKEDFYQYVKAFGFGQKTDINLPGEADGLVYDYDD IGPVELATMSFGHGISVTPMQLITAVSAVASDGVLLNPRLVDRIENEEGEVIKDFKSK EIRKVVSEETAKTTRDLLEGVVTDGSGEKAQVKGYRIGGKTGTAKHYGVQSYDSSFIG MLPIDNPQLVVLVVMKGVSSYPYYGSQVAAPLFHDVVKDTVRYLGIPPTEREEVRDRE QEDSKEVEVPNLINYSFAEGQSKLRQLGLNSKFEGSGDQIADQIPKPGAMIRKGSTVI FFSDDALDHRSRYDITVPNLEGESLKEARSLLSELELKLEGEGKGTITSQQPKPGTRI ESGDTIKVKLN" misc_feature 807590..809392 /locus_tag="Acear_0740" /note="stage V sporulation protein D; Region: spoVD_pbp; TIGR02214" /db_xref="CDD:131269" misc_feature 807668..808105 /locus_tag="Acear_0740" /note="Penicillin-binding Protein dimerisation domain; Region: PBP_dimer; pfam03717" /db_xref="CDD:190723" misc_feature 808232..809143 /locus_tag="Acear_0740" /note="Penicillin binding protein transpeptidase domain; Region: Transpeptidase; cl01039" /db_xref="CDD:154162" misc_feature 809225..809389 /locus_tag="Acear_0740" /note="PASTA domain of PBP2x-like proteins, first repeat. Penicillin-binding proteins (PBPs) are the major targets for beta-lactam antibiotics, like penicillins and cephalosporins. Beta-lactam antibiotics specifically inhibit transpeptidase activity by...; Region: PASTA_Pbp2x-like_1; cd06576" /db_xref="CDD:119327" gene 809651..811141 /locus_tag="Acear_0741" /db_xref="GeneID:9512782" CDS 809651..811141 /locus_tag="Acear_0741" /EC_number="6.3.2.13" /note="COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterProIPR018109:IPR013221:IPR004101:IPR000713:IPR 005761; KEGG: hor:Hore_09040 UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: B8CWJ1 UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase" /protein_id="YP_003827346.1" /db_xref="GI:302391526" /db_xref="GeneID:9512782" /translation="MKNLNEVVTDLKIGVLQGDLDSRIAGIAYDSRNVETDYLFVCIE GFTDDGHNYIEEAIDSGATALLVEKEVEVDSEVTVIKTDDTRLGLAEVSAAFYDYPSR ELKVVGVTGTNGKTTNTYLIESILKKAGYKLGLIGTIKNKVSDQTFDSQRTTPEALDI NKLLAQMIDKGVTHVVMEVSSHALDLNRVAKIDFDVAIFTNITQDHLDFHDSFSEYLA AKKKLFSSLKDSSEKTAIINIDDPHSDEFLEAANSKVLTYGIEKDANLKAKDITISPT GVEFGLESTIGEMELDLNITGLFNVYNTLSAIGAGLSLGVDLDEIKAGLEEIQGIAGR FEIIEEAQDFGVIVDYAHTPDSLRNILETAHDFVEGRIIVVFGCGGDRDKDKRPIMGQ VAVELGDFAVVTSDNPRSEEPAEIIADIEVGIKEKDKIKGEDCDYIIIEDRAEAINYG IESAQPDDLVFIVGKGHETYQTFKDKTIPFDDREVARRSLAKIRGE" misc_feature 809717..809941 /locus_tag="Acear_0741" /note="Mur ligase family, catalytic domain; Region: Mur_ligase; pfam01225" /db_xref="CDD:144716" misc_feature 809720..811129 /locus_tag="Acear_0741" /note="UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Provisional; Region: murE; PRK00139" /db_xref="CDD:178894" misc_feature 810008..810583 /locus_tag="Acear_0741" /note="Mur ligase middle domain; Region: Mur_ligase_M; pfam08245" /db_xref="CDD:191979" misc_feature 810641..810901 /locus_tag="Acear_0741" /note="Mur ligase family, glutamate ligase domain; Region: Mur_ligase_C; pfam02875" /db_xref="CDD:190458" gene 811143..812540 /locus_tag="Acear_0742" /db_xref="GeneID:9512783" CDS 811143..812540 /locus_tag="Acear_0742" /note="COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR013221:IPR004101:IPR000713:IPR005863; KEGG: dae:Dtox_1051 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: C1TA08 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-d iaminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase" /protein_id="YP_003827347.1" /db_xref="GI:302391527" /db_xref="GeneID:9512783" /translation="MEIMTVDDFISEIDGRLISGNLKEEIKQISIDSRTINSGELFFA IKGDRFDGHDFVMDALRAEAVGAVVDNEQVERYNNVDSDEVIIGVEDTTRALQDLAEY YRSLFDIPVIGITGSTGKTTTKDLVASVLETKFKTLKTEGNYNNEFGLPLTLFRLDST YEAVVVELAMRGLGDIKTLCQIAQPQIGVVTNVGLTHLECLGSQENIAKAKSELVENL PPTGTAILNGDDKYVRQMADETKAEILYYGRESGNNLQASRVDNLGEAGLKFRVSRQL EEFTIDLPLAGEYNVYNALAAVGVGLKLGLNINEIQQGLAEPDLTGMRGEIKELKDDI TLINDAYNANPTSMEAGLDLLVDIGTDKGGLIAVLGDMLELGSAAEEAHRQIGKKVIN KKIDYLLTVGDLASLIGQEAKKLGMDSSRIFICDDNQEINRQLLQLIKPDDTILLKGS RGMKLEEVEKALLGD" misc_feature 811149..812537 /locus_tag="Acear_0742" /note="UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]; Region: MurF; COG0770" /db_xref="CDD:31113" misc_feature 811215..811454 /locus_tag="Acear_0742" /note="Mur ligase family, catalytic domain; Region: Mur_ligase; pfam01225" /db_xref="CDD:144716" misc_feature 811515..812021 /locus_tag="Acear_0742" /note="Mur ligase middle domain; Region: Mur_ligase_M; pfam08245" /db_xref="CDD:191979" misc_feature 812103..812351 /locus_tag="Acear_0742" /note="Mur ligase family, glutamate ligase domain; Region: Mur_ligase_C; pfam02875" /db_xref="CDD:190458" gene 812557..813519 /locus_tag="Acear_0743" /db_xref="GeneID:9512784" CDS 812557..813519 /locus_tag="Acear_0743" /EC_number="2.7.8.13" /note="COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018480:IPR018481:IPR003524; KEGG: hor:Hore_09060 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase, family 4, conserved region; phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR: B8CWJ3 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide-trans ferase; PFAM: glycosyl transferase family 4; phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase" /codon_start=1 /transl_table=11 /product="phospho-N-acetylmuramoyl-pentapeptide- transferase" /protein_id="YP_003827348.1" /db_xref="GI:302391528" /db_xref="GeneID:9512784" /translation="MINLIYAAATAFIITLLIGPVMISLLRRLKFGQNIREVGPRRHF EKSGTPTMGGVIILVSTVVPVLLFTDITPKLFWALFVTLSYGCLGLLDDSIKIVADRS LGLRAMHKLLIQILIGGLLGYNVLYNLNISSELIIPYLGTVIDLGIYFIPFVILVVVG TSNAVNLTDGLDGLAAGVTIIVAITYTVINLKFGNYDLAIFTTSIVGACLGFAWFNSY PAQVFMGDTGSLALGGAIAVAAVLTQTELFLVIIGGVYVIEALSVMIQVIYFKLTGGK RIFKMSPLHHHFELKGWKETKVVIRFWIVAAILSLVGLLGLQGI" misc_feature 812611..813507 /locus_tag="Acear_0743" /note="phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional; Region: mraY; PRK00108" /db_xref="CDD:178869" misc_feature 812671..813501 /locus_tag="Acear_0743" /note="Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the formation of the first lipid intermediate in the synthesis of bacterial cell wall peptidoglycan. It catalyzes the formation of undecaprenyl-pyrophosphoryl-N-...; Region: GT_MraY; cd06852" /db_xref="CDD:133462" misc_feature 812830..812835 /locus_tag="Acear_0743" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:133462" misc_feature 813223..813234 /locus_tag="Acear_0743" /note="putative catalytic motif [active]" /db_xref="CDD:133462" misc_feature order(813385..813387,813403..813417) /locus_tag="Acear_0743" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:133462" gene 813544..814908 /locus_tag="Acear_0744" /db_xref="GeneID:9512785" CDS 813544..814908 /locus_tag="Acear_0744" /note="COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR016040:IPR013221:IPR004101:IPR005762; KEGG: hor:Hore_09070 UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: B8CWJ4 UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanine/D-glutamate ligase" /protein_id="YP_003827349.1" /db_xref="GI:302391529" /db_xref="GeneID:9512785" /translation="MNLADKKVVVIGLGKRTGVAAAEFLVKQKAEVVVSDIKSADELQ NELGELADYEIDFDLGGHSSKVTDNTDLIVVSPGVPSDIPILEKAQSLGIPVISEIEL AYHFCSAPIMAITGTNGKTTTTTLTGEIFTVAQEEVKIRGNIGYPLIEDITSLTDKGV VVAEISSFQLENIRDFRPKISLILNLTPDHLNRHGTFEDYIAAKKKIFINQTESDYTV LNYDDELTRGLADETGGEVIYFSQQSRLNHGIYAAEGKIINNLTADNEPLIQIDETGI KGPHNLENALGAVVIALLRGIDVKIIRKVLQEFSGIEHRIEEVATIEGIKYINDSKAT NPAAAIKALETFSAPITLIAGGMDKKAELTDFAFKIEENVQNLILLGETAEKIEESVT EFRFSNIKQVDSISEAVKEAEEVSVKGSIVLLAPGCASWDMFGSYKERGNRFKKEVME LRRK" misc_feature 813544..814896 /locus_tag="Acear_0744" /note="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional; Region: murD; PRK14106" /db_xref="CDD:184511" misc_feature 813544..>813702 /locus_tag="Acear_0744" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 813955..814419 /locus_tag="Acear_0744" /note="Mur ligase middle domain; Region: Mur_ligase_M; pfam08245" /db_xref="CDD:191979" misc_feature 814477..>814629 /locus_tag="Acear_0744" /note="Mur ligase family, glutamate ligase domain; Region: Mur_ligase_C; pfam02875" /db_xref="CDD:190458" gene 814910..815995 /locus_tag="Acear_0745" /db_xref="GeneID:9512786" CDS 814910..815995 /locus_tag="Acear_0745" /note="COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR006162:IPR001182:IPR013437; KEGG: hor:Hore_09080 stage V sporulation protein E; PFAM: cell cycle protein; SPTR: B8CWJ5 Stage V sporulation protein E; TIGRFAM: cell division protein FtsW; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; stage V sporulation protein E; cell division protein FtsW" /codon_start=1 /transl_table=11 /product="cell division-specific peptidoglycan biosynthesis regulator FtsW" /protein_id="YP_003827350.1" /db_xref="GI:302391530" /db_xref="GeneID:9512786" /translation="MEKTKPPDLIIFFTMITLLGIGIVMVFSSTSIRAYANYGDSFYF LKKQFIWSIIGIGAMIFFMTINYNLYKNLARLGIMISVGLLVAVLIFGKVVGGSQRWL NLGFMRMQPSEIIKLSIVIYMARYLSIKQNQLDDFLHGLGPPLFILALICGLILLQPD LGTTVAIGGTVMVMFVAAGVRFKHLAWLASVGLLGVIYLILSAPYRMQRFLAFLDPWK DPLDSGFHIIQSLYALGSGGLFGVGIGQSKQKFFYLPEPGTDFIFAIIGEELGFLGAV VVVLLFFLFAWRGLRIAAEAPDVFSSLLAVGITTMITLQAVINIGVVTGSMPVTGMTL PFISYGGSSLVIMLSGVGVLLNISRHV" misc_feature 814931..815992 /locus_tag="Acear_0745" /note="Cell cycle protein; Region: FTSW_RODA_SPOVE; cl00511" /db_xref="CDD:189110" gene 816010..817116 /locus_tag="Acear_0746" /db_xref="GeneID:9512787" CDS 816010..817116 /locus_tag="Acear_0746" /EC_number="2.4.1.227" /note="COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR004276:IPR007235:IPR006009; KEGG: drm:Dred_0675 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: glycosyltransferase 28 domain; glycosyl transferase family 28; PRIAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; SPTR: A1HU51 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyltransferase family 28 N-terminal domain; glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase" /protein_id="YP_003827351.1" /db_xref="GI:302391531" /db_xref="GeneID:9512787" /translation="MKAIITGGGTGGHIYPGLAIARNIEAEYENPEILFVGNAEGLEA EIVPQAGYELKTVPCQGLPRELSIKILESLILTGLGVWKAREIITSFQPDIVIGTGGY VSGPVVLAAALMGKKTIIQEQNAYPGLTNRLLAYLVDKVMLSHQDAEDYFTSRADFIW TGNPIRPEIMTARKEASCNKLGLDSKRKIILSFGGSRGARSINQAMEEVYRLAQRNSQ LQILHITGKNEFDRVQEVAAKLGITELDTGNIIIKPYLYDMAAGLAAADLVISRAGAT GLAEITARGIPAILIPYPHAAENHQVHNARALEKEGAAKVILDQNLTGKRLVEEVKNL IFTDKKLERMARASKRLGKPQAGANILQLVKELV" misc_feature 816046..817113 /locus_tag="Acear_0746" /note="undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional; Region: murG; PRK00726" /db_xref="CDD:179100" misc_feature 816046..817098 /locus_tag="Acear_0746" /note="MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl...; Region: GT1_MurG; cd03785" /db_xref="CDD:99961" misc_feature order(816220..816222,816229..816231,816262..816264, 816346..816348,816421..816423) /locus_tag="Acear_0746" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99961" misc_feature order(816379..816381,816595..816597,816679..816681, 816772..816774,816784..816786,816829..816840, 816847..816849,816886..816888,816907..816912, 816919..816921) /locus_tag="Acear_0746" /note="active site" /db_xref="CDD:99961" gene 817255..818664 /locus_tag="Acear_0747" /db_xref="GeneID:9512788" CDS 817255..818664 /locus_tag="Acear_0747" /EC_number="6.3.2.8" /note="COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterProIPR016040:IPR013221:IPR004101:IPR000713:IPR 005758; KEGG: hor:Hore_09100 UDP-N-acetylmuramate--alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; SPTR: B8CWJ7 UDP-N-acetylmuramate--alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--alanine ligase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramate/alanine ligase" /protein_id="YP_003827352.1" /db_xref="GI:302391532" /db_xref="GeneID:9512788" /translation="MEDEARIHLIGIGGIGMSGIANLLLDLGYEVSGSDIKESDIVTD LQQKGAKVSIGHQASNIEGADEVVLSSAIPEDNPELVKAKKEGLPILKRAEMVGKLMS KQQGISISGTHGKTTTTAMAATVLEKNSLDSTILVGGKLDLISGSNAKLGTGDYFITE ADESDGSLLFMDPKIGVVTNIEADHLDYYESCSEIIDTFSKFLNSLPSDGVGIVSLDD NEIRDMVDRVDTDLITYGLNNKAEIMAKDIELQEFGSKSVIYRYQDRLGELKLNVPGK HNLSNALAVIGIGLHIGLEFSKIAEALKDFTGVKRRFEKLGKYRGAVLVDDYAHHPTE LEATLAAANNMDFERIIAVFQPHRYTRTKFLLEEFSLAFGDADEVIITDIYASGEEPI PGVKAEKIAELINQRVFQKAKFIAELDKVYDYLKDRIGAGDLVLTLGAGDVWKVGDRL ASNRVETIVNSPEELTMEV" misc_feature 817315..818607 /locus_tag="Acear_0747" /note="UDP-N-acetylmuramate--L-alanine ligase; Provisional; Region: murC; PRK00421" /db_xref="CDD:179018" misc_feature <817321..817560 /locus_tag="Acear_0747" /note="Mur ligase family, catalytic domain; Region: Mur_ligase; pfam01225" /db_xref="CDD:144716" misc_feature 817579..818121 /locus_tag="Acear_0747" /note="Mur ligase middle domain; Region: Mur_ligase_M; pfam08245" /db_xref="CDD:191979" misc_feature 818179..818439 /locus_tag="Acear_0747" /note="Mur ligase family, glutamate ligase domain; Region: Mur_ligase_C; pfam02875" /db_xref="CDD:190458" gene 818668..819573 /locus_tag="Acear_0748" /db_xref="GeneID:9512789" CDS 818668..819573 /locus_tag="Acear_0748" /EC_number="1.1.1.158" /note="COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; InterProIPR016167:IPR016169:IPR011601:IPR006094:IPR 016166:IPR003170; KEGG: dau:Daud_1434 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: B1I4C2 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylenolpyruvoylglucosamine reductase" /protein_id="YP_003827353.1" /db_xref="GI:302391533" /db_xref="GeneID:9512789" /translation="MKESIKQELKSKVKGKISFEESLKNHTSFQVGGPAEVLIIPQDI DDLQQLMVYLNRTGVEHTVIGNGTNLLVSDQGISGVVIKLVGGIDGVEIQKQRITAGG GASLPVVAKQAAKVGLSGLEFASGLPATVGGATVMNAGLKSLNHISKVIDKVRVVSST GELQIFDSSECEFGYRQSRFQLADSVIVGVEMILKPKPKEKIQSKMEELIAKRKKSQP LKMPNAGCIFKNPSSASAGRLIDEAGGKGMQIGGAVVSSKHANFIVNKDNATAQDIMD LIDEVKTLVKEEYGLELVCEVQIIS" misc_feature 818686..819567 /locus_tag="Acear_0748" /note="UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional; Region: murB; PRK13905" /db_xref="CDD:184385" misc_feature 818770..819156 /locus_tag="Acear_0748" /note="FAD binding domain; Region: FAD_binding_4; pfam01565" /db_xref="CDD:190040" misc_feature 819262..819570 /locus_tag="Acear_0748" /note="UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; Region: MurB_C; pfam02873" /db_xref="CDD:111727" gene 819589..820854 /locus_tag="Acear_0749" /db_xref="GeneID:9512790" CDS 819589..820854 /locus_tag="Acear_0749" /EC_number="2.5.1.7" /note="COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; InterPro IPR001986:IPR013792:IPR005750; KEGG: pth:PTH_1858 UDP-N-acetylglucosamine enolpyruvyl transferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); SPTR: A5D142 UDP-N-acetylglucosamine enolpyruvyl transferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /protein_id="YP_003827354.1" /db_xref="GI:302391534" /db_xref="GeneID:9512790" /translation="MSSFIVEGGNRLTGEVEISGAKNAVLPILAGTALSSGENSIHQV PKLRDVRVMKEVLESLGAEVSQEDDVITVNSRLIDSCEIAEALMRKMRATVFLMGPLL ARFNQVRISQPGGCSIGPRPIDLHIKGLKALGAKFTEGHGYLEVKADKLVGADIHLDF PSVGATENIMMAATKAKGTTVLRNAAKEPEIIDLQNFLNCMGAEIRGAGTDMIKIKGV EKLQSINYTVIPDRIETGTFMVAAAITNGEVLLQNVIPEHIEPVIAKLIEAGVEIKYD QDQIKVTGVPKVKAVDVKTLPYPGFPTDMQPQFMALLSVAEGTSVITETIFENRFKHA DELRRMGADIKIESRSAIIEGIDNLSGTVVEASDLRAGAALVLAGLVAENKTEIKDIY HIDRGYEDLEEKIDRLGGQISRVKEEPNE" misc_feature 819589..820833 /locus_tag="Acear_0749" /note="UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated; Region: PRK09369" /db_xref="CDD:181804" misc_feature 819622..820812 /locus_tag="Acear_0749" /note="UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall. The reaction is phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine =...; Region: UdpNAET; cd01555" /db_xref="CDD:30128" misc_feature order(819640..819651,820270..820281) /locus_tag="Acear_0749" /note="hinge; other site" /db_xref="CDD:30128" misc_feature order(819655..819657,819862..819864,819874..819876, 819949..819966,820066..820068,820075..820080, 820498..820500) /locus_tag="Acear_0749" /note="active site" /db_xref="CDD:30128" gene 820847..821782 /locus_tag="Acear_0750" /db_xref="GeneID:9512791" CDS 820847..821782 /locus_tag="Acear_0750" /EC_number="6.3.2.4" /note="COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterProIPR000291:IPR013817:IPR013816:IPR011127:IPR 011095:IPR011761:IPR016185:IPR005905; KEGG: pth:PTH_1390 D-alanine-D-alanine ligase and related ATP-grasp enzymes; PFAM: D-alanine--D-alanine ligase domain protein; PRIAM: D-alanine--D-alanine ligase; SPTR: A5D2F9 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase" /codon_start=1 /transl_table=11 /product="D-alanine/D-alanine ligase" /protein_id="YP_003827355.1" /db_xref="GI:302391535" /db_xref="GeneID:9512791" /translation="MNKRVAVIRGGRSKERDISLKTGKAVYEALETEGVDVIALDPEE ENFYQQLTTEEIDVAFIALHGRYGEDGTIQGLFEMMDIPYTGSGVLASSLAMDKIISK KLFQQEGVLTPEFKVISRNNWDQQAEKLLTELKIELDLPVVVKPALEGSSLGLSIIKK RENLATAVDTAFEYDNEVLVEKYIAGKEITIGILGNQDLSVLPIIEIKPKTGAYDFEA KYTKGMTEFVIPAQLEEEIYNQAQKIANKAYRVLKCSGMARADLIVSKEGKPYVLEVN TIPGMTETSLLPQAAQAAGIDFPELVLEILEYAVK" misc_feature 820847..821773 /locus_tag="Acear_0750" /note="D-alanine--D-alanine ligase; Reviewed; Region: ddl; PRK01372" /db_xref="CDD:179288" misc_feature 820853..821107 /locus_tag="Acear_0750" /note="D-ala D-ala ligase N-terminus; Region: Dala_Dala_lig_N; pfam01820" /db_xref="CDD:190121" misc_feature 821156..821767 /locus_tag="Acear_0750" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" gene 821871..822572 /locus_tag="Acear_0751" /db_xref="GeneID:9512792" CDS 821871..822572 /locus_tag="Acear_0751" /note="COGs: COG1589 Cell division septal protein; InterPro IPR013685; KEGG: hor:Hore_09110 polypeptide-transport-associated domain protein FtsQ-type; PFAM: polypeptide-transport-associated domain protein FtsQ-type; SPTR: A1HU47 polypeptide-transport-associated domain protein, FtsQ-type; PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type" /codon_start=1 /transl_table=11 /product="polypeptide-transport-associated domain protein FtsQ-type" /protein_id="YP_003827356.1" /db_xref="GI:302391536" /db_xref="GeneID:9512792" /translation="MDRKDYFILSLSLVIIIAVLTFINSNFFSLSSVVVSGNKVLTNR EIIQAAGLNKEENIFQIDFEDISAKLMEKHQIKGVVLKRKLPSTVKIKLDERRPLLAV LSNNKYLLLNKNGWILTKIEKLSNVTYPILKDVEVNTINNKVKLTEHLQTSLQYLTGV DRKILNRIDSIEFDTKDNVIFQLESGIVKFGQPLKIDYKIKLFNQIYHDLKEKRKKLE YINLKYYKNPVVRLE" misc_feature <821985..822566 /locus_tag="Acear_0751" /note="Cell division septal protein [Cell envelope biogenesis, outer membrane]; Region: FtsQ; COG1589" /db_xref="CDD:31777" misc_feature 821985..822158 /locus_tag="Acear_0751" /note="POTRA domain, FtsQ-type; Region: POTRA_1; pfam08478" /db_xref="CDD:149506" gene 822803..824089 /locus_tag="Acear_0752" /db_xref="GeneID:9512793" CDS 822803..824089 /locus_tag="Acear_0752" /note="COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR003494:IPR020823; KEGG: hor:Hore_09120 cell division protein FtsA; PFAM: cell division protein FtsA; SPTR: B8CWJ9 Cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA" /codon_start=1 /transl_table=11 /product="cell division protein FtsA" /protein_id="YP_003827357.1" /db_xref="GI:302391537" /db_xref="GeneID:9512793" /translation="MSQRRIITGLDIGTTKICAIIAEVNDNEILDIIGIGTSPSVGLR KGVVVDIDDTVSSIESAIEKAERMAGIEVDSVYVGIAGSHISSMNSQGVVAITGEDKE ITQEDIDRVIEASQIVAIPPEREILHVLPRGFVIDGCQKVKHPRGMSGVRLKVETHIV TGSITSIENLVKSVNKLGIDVEDVVLEPLAASESVLSNSEKELGVVLVDIGGGTTDVA IFKEGSIWYTAVLPVGGDHITNDIAVGLRTPIKNAEKIKIKDGSALADEVSEKEKIDV LTTSGKETKTVSRKLLCEIIEPRIDEIFSLVQQEIYESGYDGLIPAGLVVTGGASLMP LIPELASEKLDLPVRRGIPDKIDDLANFVDDNIYSVGNEEVNISEDSTAIFATGVGLV CYGNQQEHESPLTSQKEGKGMGNILNKVKDWFDGTF" misc_feature 822818..823915 /locus_tag="Acear_0752" /note="cell division protein FtsA; Region: ftsA; TIGR01174" /db_xref="CDD:162236" misc_feature 822821..823387 /locus_tag="Acear_0752" /note="Cell division protein FtsA; Region: FtsA; cl11496" /db_xref="CDD:196250" misc_feature 823415..823864 /locus_tag="Acear_0752" /note="Cell division protein FtsA; Region: FtsA; cl11496" /db_xref="CDD:196250" gene 824133..825230 /locus_tag="Acear_0753" /db_xref="GeneID:9512794" CDS 824133..825230 /locus_tag="Acear_0753" /note="COGs: COG0206 Cell division GTPase; InterProIPR020805:IPR000158:IPR003008:IPR018316:IPR 019746:IPR008280; KEGG: hor:Hore_09130 cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: B8CWK0 Cell division protein ftsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ" /codon_start=1 /transl_table=11 /product="cell division protein FtsZ" /protein_id="YP_003827358.1" /db_xref="GI:302391538" /db_xref="GeneID:9512794" /translation="MFEFCAETDQFADIKVVGVGGGGNNAINRMIESQLKGVEFVAIN TDAQALVSSAANSTVQIGEKLTEGLGAGANPELGQKAAEESREMIAETLKGADMVFIT AGMGGGTGTGAAPVVAEVAKELGALTVAVVTKPFTVEGRKRMEKAEYGVDNLKEKVDT LIVIPNDRLLETVEKQTSLMEAFEVADDVLRQGVQGISDLITITGLINLDFADVKTIM TDAGSALMGIGDAEGEDRAAEAARQAIASPLLEASIEGAKGVLLNITGGVDLGLHEAN EAAKTVSEVADANANIILGAVVDEDLEKEVKVTVIATGFDETEEQEVQVEESKPDVDT NDEKSGRDLDNIESFANDDLDIPAFLRQKEG" misc_feature 824133..825224 /locus_tag="Acear_0753" /note="cell division protein FtsZ; Validated; Region: PRK09330" /db_xref="CDD:181781" misc_feature 824166..825074 /locus_tag="Acear_0753" /note="FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum...; Region: FtsZ_type1; cd02201" /db_xref="CDD:100021" misc_feature order(824190..824198,824205..824207,824277..824279, 824442..824462,824535..824540,824559..824561, 824628..824630,824679..824681,824688..824693, 824700..824702) /locus_tag="Acear_0753" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:100021" misc_feature order(824751..824756,824760..824762,824937..824948, 824955..824957) /locus_tag="Acear_0753" /note="SulA interaction site; other site" /db_xref="CDD:100021" gene 825445..826362 /locus_tag="Acear_0754" /db_xref="GeneID:9512795" CDS 825445..826362 /locus_tag="Acear_0754" /note="InterPro IPR005081; KEGG: mta:Moth_0851 sporulation factor SpoIIGA; PFAM: peptidase U4 sporulation factor SpoIIGA; SPTR: Q2RK71 Putative uncharacterized protein; PFAM: sporulation factor SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA" /codon_start=1 /transl_table=11 /product="peptidase U4 sporulation factor SpoIIGA" /protein_id="YP_003827359.1" /db_xref="GI:302391539" /db_xref="GeneID:9512795" /translation="MELTIYLDLLIIINLLMNYLLLWTTGRLIKIDYKIWRLILSAFV GTLYTILILFPQWQFCNNIVTYFFISILMVCLAYWPLWWKRLLKALGYFYLMTFLTAG VLMAGYNLNLQSQFREVTNSFNLSLQDSWILLLGALVLGLLGKFGWSIFQRRVPAESA IIPLVIIFEGKKLELEALIDTGNRLCDPLTEAPVIIVELNSLLTVLPQEIEEIFSNYD LALNREEIATDIGNTAWANRFRLIPFSAIGSQRELLIGLKPDEVRFNFKDEIFITDQV IVGVEDQEFNQIEDYTALMNPELFDKEGG" misc_feature 825511..826344 /locus_tag="Acear_0754" /note="Sporulation factor SpoIIGA; Region: Peptidase_U4; cl04058" /db_xref="CDD:155847" gene 826365..827108 /locus_tag="Acear_0755" /db_xref="GeneID:9512796" CDS 826365..827108 /locus_tag="Acear_0755" /note="COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR016263:IPR000943:IPR011991:IPR007627:IPR 007630:IPR013325:IPR013324:IPR014200:IPR014284; KEGG: bcl:ABC2351 sporulation sigma factor SigE; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; SPTR: A1HS90 RNA polymerase sigma factor (Fragment); TIGRFAM: RNA polymerase sigma-E factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-E factor" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 29 subunit, SigE" /protein_id="YP_003827360.1" /db_xref="GI:302391540" /db_xref="GeneID:9512796" /translation="MLALAQKLKLSFRIQFVKLLQKLGLDVNRKIFYVGSSEALPPPL SNEEESYLLSKLKEGDKAVRSVLIERNLRLVVYIARKFENTGIDIEDLVSIGTIGLIK AVNTFDVSKRIKLATYASRCIENEILMYLRRNNKKKSEISFDEPLNIDWDGNELKLSD VLGTDMDLIYQYIEEDVDRELLLQAMEVLTDRERKIMILRFGLGEDREEMTQKEVADI LGISQSYISRLEKRIIKKLQQEISKMQLE" misc_feature 826392..827099 /locus_tag="Acear_0755" /note="sporulation sigma factor SigE; Reviewed; Region: PRK08301" /db_xref="CDD:181367" misc_feature 826563..826772 /locus_tag="Acear_0755" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature 826899..827078 /locus_tag="Acear_0755" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cd06171" /db_xref="CDD:100119" misc_feature order(826932..826934,826962..826964,826995..827000, 827028..827030,827034..827039,827043..827051, 827055..827060,827064..827066) /locus_tag="Acear_0755" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:100119" gene 827133..827438 /locus_tag="Acear_0756" /db_xref="GeneID:9512797" CDS 827133..827438 /locus_tag="Acear_0756" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827361.1" /db_xref="GI:302391541" /db_xref="GeneID:9512797" /translation="MKISSDQIWTTTEIMRDLFSMPDRLIYNMPERERYNRIHKYLYQ RVKEEKATSVGRSEVNSQECYGFNFHNELYMIPIKFLVESEGEKENISSSGKKVISL" gene 827852..829132 /locus_tag="Acear_0757" /db_xref="GeneID:9512798" CDS 827852..829132 /locus_tag="Acear_0757" /note="COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: drm:Dred_2890 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: A4J8J1 Thiamine biosynthesis protein thiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC" /codon_start=1 /transl_table=11 /product="hydroxymethylpyrimidine synthase" /protein_id="YP_003827362.1" /db_xref="GI:302391542" /db_xref="GeneID:9512798" /translation="MTQLIKAKSGKITFEMEQIATREGIAPEVIRKKVAAGELVIPKN KERKTSFSQGFGAELKTKISTSVGLYDNYTDLKTELNKVDLAVELGTDAIMDLSKDGD IDNMRRQVLDNTELPVGTLPIYQAAKESQEKTDSILDMTVDDIFNIVEKQAADGVDFM GIHAGLKRDILDRLKFEGRVEGLVSHGGQILAGWMLHNDCENPFYEHYDRLLEIAKEY DVTISLADTFRPGAIEDSLDRAQVQELIILGELVEEGWNEGVQMMVKGPGHIPLDQIE STVQLQKELCHGAPYFTFGPLVTDLATGYDDINSAIGGAHAAAAGADLLCYVTPVEHL DFPTKEDIQQGVMAAKIAAQVGDLSKGDQRAWELEEKMAQARKELDWKEEIELALNPK HAEEIRSKRNPAGSDGCAMCGEYCAIKVVNEYLN" misc_feature 827852..829129 /locus_tag="Acear_0757" /note="ThiC family; Region: ThiC; cl08031" /db_xref="CDD:195653" gene 829162..830439 /locus_tag="Acear_0758" /db_xref="GeneID:9512799" CDS 829162..830439 /locus_tag="Acear_0758" /note="COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: hmo:HM1_2074 thiamine biosynthesis protein, ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: B0TGD5 Thiamine biosynthesis protein, thic; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC" /codon_start=1 /transl_table=11 /product="hydroxymethylpyrimidine synthase" /protein_id="YP_003827363.1" /db_xref="GI:302391543" /db_xref="GeneID:9512799" /translation="MTQLSKAKEGIITNEMEAVAENEGLSPEEIRSGVAQGEIVIPSN VNRDRIDYMGIGSNLQTKVNASIGSSKDYPDPEREKEKLQAALETGADAIMDLSTGGD IDLVRKNTLEIADVPVGTVPIYQAGIESIDKYGSVVEMKEEDIFTEIERQAEAGVDFM AIHCGMTLEVLERLKKEGRTTDIVSRGGGFLTGWMLHHNRENPLYTDYDRVLEIAKKH DVTLSLGDGIRPGAVVDSLDRAQIQGLLVTGELVQRAREAGVQVMVEGPGHVPLEDID TTIQVQKELCHQAPFFILGMLVTDLAAGYDHIVAAIGGARSTWAGADFVCYVTPAEHL GLPAPEDIGAGVTAAKIATHAGDIAKYGEEVKQLDRKMAEARIKDDWQEQIKLAINED EIEARKGEELRDEMKVMDQKKAEPMEIVDNYLQ" misc_feature 829162..830376 /locus_tag="Acear_0758" /note="ThiC family; Region: ThiC; cl08031" /db_xref="CDD:195653" gene 830453..831505 /locus_tag="Acear_0759" /db_xref="GeneID:9512800" CDS 830453..831505 /locus_tag="Acear_0759" /EC_number="2.4.2.21" /note="COGs: COG2038 NaMN:DMB phosphoribosyltransferase; InterPro IPR003200:IPR017846; KEGG: drm:Dred_2728 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; PRIAM: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; SPTR: A4J829 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase" /protein_id="YP_003827364.1" /db_xref="GI:302391544" /db_xref="GeneID:9512800" /translation="MEMELLEKTVAEIDKLNEEKMAEAKQRLDSLTKPPGSLGKLEEI AIKLAGMSGELYPKVDKKVHIVMAGDHGVVSEGVSAVSQEVTIQMVYNFLNEGAAINV LANQVGVDVTIIDIGVAGELDAEGLIDKKVKLGTDNLAQGPAMDRKEAVASIETGIEV VTEMIENGANLIGTGEMGIGNTTPSSAILAAITDLSLDDTVGFGTGIDDDQLEKKKEI VAQALEVNQPDVNDGLDVLAKVGGLEIGGMAGVMLGAAAANKPVMVDGFISGAAALIA QKIEPKVTDYLIPSHKSVEPGHIRMYEILGLEPMLDMDMRLGEGTGAVLGMNLVESAT RIISQMATFEEAQVEH" misc_feature 830477..831496 /locus_tag="Acear_0759" /note="Phosphoribosyltransferase; Region: DBI_PRT; pfam02277" /db_xref="CDD:190270" misc_feature 830546..831490 /locus_tag="Acear_0759" /note="Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (DMB-PRT), also called CobT; Region: DMB-PRT_CobT; cd02439" /db_xref="CDD:143332" misc_feature order(830546..830575,830690..830692,830705..830707, 830714..830719,830741..830749,830756..830761, 830765..830767,831332..831334,831374..831376, 831380..831397,831401..831403,831425..831427, 831434..831436,831446..831448,831455..831460, 831470..831475,831488..831490) /locus_tag="Acear_0759" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:143332" misc_feature order(830546..830548,830552..830557,830687..830689, 830705..830707,830717..830719,830978..830998, 831248..831256,831329..831331,831401..831409, 831476..831478) /locus_tag="Acear_0759" /note="active site pocket [active]" /db_xref="CDD:143332" misc_feature 831407..831409 /locus_tag="Acear_0759" /note="putative cataytic base [active]" /db_xref="CDD:143332" gene 831531..832043 /locus_tag="Acear_0760" /db_xref="GeneID:9512801" CDS 831531..832043 /locus_tag="Acear_0760" /note="KEGG: dhd:Dhaf_3889 hypothetical protein; SPTR: Q24TX9 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827365.1" /db_xref="GI:302391545" /db_xref="GeneID:9512801" /translation="MSFKTNTKEREENFWQARNLVKMALFTALSGIGAWLTFPSPIGT VALDSAPGYFLGLMAGGWQGAIVLCLGHLLSAVKMGFPLGPIHLLVGILMGGCGLAVS YLYQRVNVVITIIVGSLLNGVVVNACLIPLLGIGFFAGMTPILLLASVVNIILAVLLY RLLKGKIDRI" gene 832055..832789 /locus_tag="Acear_0761" /db_xref="GeneID:9512802" CDS 832055..832789 /locus_tag="Acear_0761" /note="KEGG: aoe:Clos_2206 hypothetical protein; SPTR: A8MIV9 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827366.1" /db_xref="GI:302391546" /db_xref="GeneID:9512802" /translation="MERDVSVIDLTVDEKLVIACDSIGRIGPKEEDIVETSGRIVGKL SARVALMEALAVRATPISVVNTLSVEYEPTGKEIIAGIEEEIAVLDMVEGDIITGSTE ENIPTLQTGIGITVVGRAAKEELRVADSQSGDLMVALGLPKVGDEVLESIEEIVNLAD LEQILELDYIHDILPVGSKGIKYEAELLAELNGLGLELEETVIDLKKSAGPATALLLT LPEEYWAELKNLFSKPLNLLGRLHSP" gene 832820..833752 /locus_tag="Acear_0762" /db_xref="GeneID:9512803" CDS 832820..833752 /locus_tag="Acear_0762" /note="InterPro IPR013838:IPR013022:IPR012307; KEGG: fnu:FN1967 hypothetical protein; PFAM: xylose isomerase domain protein TIM barrel; SPTR: C6PRJ9 xylose isomerase domain protein TIM barrel; PFAM: xylose isomerase-like TIM barrel" /codon_start=1 /transl_table=11 /product="xylose isomerase domain protein TIM barrel" /protein_id="YP_003827367.1" /db_xref="GI:302391547" /db_xref="GeneID:9512803" /translation="MRELFNFSVYTLEWFENDWQQVVDFCQEQGFAGIELLSAGLDRN QAKDEIPNDLIKGMHLSYYLNWLPLTSTEYNKLDLDKVIADYREELELASELDVDYVV FHASSVKSEDVFREDFTYSDSTILSEIVEVVNKVMAGMDVEFKLLFENLWWSGLTFLD KKEALEFIHQVDYENVGFLVDTGHLMNTNPKLSTEAEGLDYLERILIEFQDTADLFYG VHLHKSLSGSYRQQNQDRLYDEFKSSQDYEEKVKVVREFISNVDQHLPFRDESPIEVL DLIKPDYVTHEFTCYEKEEFIQFLQIQRDLLNHN" misc_feature <832991..833527 /locus_tag="Acear_0762" /note="AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-...; Region: AP2Ec; cl12060" /db_xref="CDD:187176" misc_feature order(832994..832996,833129..833131,833264..833266, 833360..833362,833369..833371,833483..833485, 833522..833524) /locus_tag="Acear_0762" /note="Metal-binding active site; metal-binding site" /db_xref="CDD:28903" gene 834659..834733 /locus_tag="Acear_0763" /pseudo /db_xref="GeneID:9512804" gene 834845..835450 /locus_tag="Acear_0764" /db_xref="GeneID:9512805" CDS 834845..835450 /locus_tag="Acear_0764" /note="COGs: COG2452 site-specific integrase-resolvase; InterProIPR006118:IPR006119:IPR000551:IPR009061:IPR 010093; KEGG: lhe:lhv_2923 transposase ORF_A; PFAM: Resolvase domain; regulatory protein MerR; SPTR: A0ZDF6 Putative uncharacterized protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: MerR family regulatory protein; Resolvase, N terminal domain; TIGRFAM: DNA binding domain, excisionase family" /codon_start=1 /transl_table=11 /product="DNA binding domain protein, excisionase family" /protein_id="YP_003827368.1" /db_xref="GI:302391548" /db_xref="GeneID:9512805" /translation="MKLSVKEAADFLGVAKSTLRRWDNEGKLVADRTEGGHRRYPKDK LIAFQKKDNNQSKLTIGYCRVSSHGQKDDLKRQVENVSNYCIANGYQFKIIRDIGSGL NYKKKGLKELIELIESRKIERIVVNYKDRLIRFGYEMFEQICELNNVEIEIINHTENK TYQEELVDDVLSIITVFSAKLYGSRSSKAKKIKETNKELFD" misc_feature 834851..835441 /locus_tag="Acear_0764" /note="Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair]; Region: COG2452" /db_xref="CDD:32568" misc_feature 834851..834988 /locus_tag="Acear_0764" /note="Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins; Region: HTH_MerR-trunc; cd04762" /db_xref="CDD:133390" misc_feature order(834854..834862,834902..834904,834950..834958) /locus_tag="Acear_0764" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133390" misc_feature 835019..835417 /locus_tag="Acear_0764" /note="Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain. Serine recombinases catalyze site-specific recombination of...; Region: SR_IS607_transposase_like; cd03769" /db_xref="CDD:58118" misc_feature order(835034..835036,835040..835042,835232..835237, 835244..835246) /locus_tag="Acear_0764" /note="catalytic residues [active]" /db_xref="CDD:58118" misc_feature 835040..835042 /locus_tag="Acear_0764" /note="catalytic nucleophile [active]" /db_xref="CDD:58118" gene 835480..836988 /locus_tag="Acear_0765" /db_xref="GeneID:9512806" CDS 835480..836988 /locus_tag="Acear_0765" /note="InterPro IPR010095; KEGG: hya:HY04AAS1_0096 transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; SPTR: B4U6M0 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003827369.1" /db_xref="GI:302391549" /db_xref="GeneID:9512806" /translation="MLRTSKIRITDQEFKEFAIEKVYLTRHFENMLLILLEQDYKQEI GDRKLISNPYVMRAVIRDTKGGQYADKVSYIKDKYQDHGLMQDLIKVGKQLKKDNLVM TMRKVRKDFKSFYTKVKNGDNSANPPKPKKLSKMNSYTLLIDNDKGMSLAYLKKGQNK LGITLDHDEGRKYLYIDHQAVRDIVGDLDNIQSVNLQYSNGELYLLITYHQEVETNND RPHKLAGLDIGVDNLAAIYIEDEASPSLIVAGKKYKTYNSKFNRQIAQISNSIDTCKL ESRKNYLRKYKSYLFEKRNRFFYDQFHKVSKRLLEYLDQHDVTELVISDNLNHLKNNG NCKLQKKTKQNFIQIPFGKLLDYLKYKAKEYGIKVTVVNEAYTSKSNSFTNEVHKVKS LQQKIDSLKAQQKQIESDIKYQQYQCLIDAYQDLLDKYNYQGKRVKRGLYLDYINDLA MHSDINGARNIAKLSSNYQKKDCNNLKKLCNPIKVENDYQFCQLLKQDKQAA" misc_feature 835756..836463 /locus_tag="Acear_0765" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature 836359..836613 /locus_tag="Acear_0765" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" gene 837592..838347 /locus_tag="Acear_0766" /db_xref="GeneID:9512807" CDS 837592..838347 /locus_tag="Acear_0766" /note="COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751:IPR018024; KEGG: dae:Dtox_3736 cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; SPTR: C1TIW6 Cobalamin biosynthesis protein CbiM; TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein CbiM" /protein_id="YP_003827370.1" /db_xref="GI:302391550" /db_xref="GeneID:9512807" /translation="MNKKKNTILIGLYFLVGIMLFPDRIYAMHIAEGFLPVKWAGIWW IAMLPFLALGIKKVKSITQKEGPGIKMLLALAGAFVFVLSSLKLPSLTGSCSHPTGVG LGAILFGPWPMVVLGCIVLIFQAVLLAHGGLTTLGANVFSMAIVGPFVAYGAYRLLKK LNAPNWLSVFTGSALGNLLTYITTATQLAWAFPGKTGFIASLIKFMGVFATTQVPLAV TEGLVTVLIFNLLLEYSEGELKELSVISKGETV" misc_feature 837673..838338 /locus_tag="Acear_0766" /note="Cobalt uptake substrate-specific transmembrane region; Region: CbiM; cl00397" /db_xref="CDD:185967" gene 838344..838637 /locus_tag="Acear_0767" /db_xref="GeneID:9512808" CDS 838344..838637 /locus_tag="Acear_0767" /note="COGs: COG1930 ABC-type cobalt transport system periplasmic component; InterPro IPR003705; KEGG: lsp:Bsph_3450 cobalt ABC transporter permease; PFAM: Cobalt transport protein CbiN; SPTR: B1HRG0 Probable cobalt transport protein; PFAM: Cobalt transport protein component CbiN; TIGRFAM: cobalt transport protein" /codon_start=1 /transl_table=11 /product="Cobalt transport protein CbiN" /protein_id="YP_003827371.1" /db_xref="GI:302391551" /db_xref="GeneID:9512808" /translation="MSLTSKNLIILCLILIVTITPLIIKQNAGFGGADGEAEGIIKKM NSDYEPWFSVIWSPPSGEIESLLFALQAALGAGFLGYYIGSKRAEAKYKDESE" misc_feature <838464..838634 /locus_tag="Acear_0767" /note="Cobalt transport protein component CbiN; Region: CbiN; cl00842" /db_xref="CDD:186218" gene 838648..839577 /locus_tag="Acear_0768" /db_xref="GeneID:9512809" CDS 838648..839577 /locus_tag="Acear_0768" /note="COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: hor:Hore_18990 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: B8CZC8 Periplasmic binding protein; PFAM: Periplasmic binding protein" /codon_start=1 /transl_table=11 /product="periplasmic binding protein" /protein_id="YP_003827372.1" /db_xref="GI:302391552" /db_xref="GeneID:9512809" /translation="MKLRQILIGLLLAAVFLAGCTAGVKTTYAEDYFAKVTDDLGREV IIKEKPQRIISLAPSHTETLFALEAGNRVVGVTEYADYPKVVNEIDKVGTIKEPNVEK IIQLQPDLVLAAGITPKEVITRLNELGIDVVGLNPTDVSEIIDSISLIDKATGQVEEA EIITTEMRNRVEEITETVAKNVDEAQRPKVFYEIWKKPLYTAGPETFIDDLIHLAGGI NIAHQAEGMWPQYSFEVLLAENPEVYLASSHSWKHQVSKESILQREKFQEIKAIQNER VYIIDQDIVNRASPRIITALEKVAKAVHPELFN" misc_feature 838663..839574 /locus_tag="Acear_0768" /note="ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: FepB; COG0614" /db_xref="CDD:30959" misc_feature 838798..839550 /locus_tag="Acear_0768" /note="Cobalamin binding protein BtuF. These proteins have been shown to function as initial receptors in ABC transport of vitamin B12 (cobalamin) in eubacterial and some archaeal species. They belong to the TroA superfamily of helical backbone metal...; Region: BtuF; cd01144" /db_xref="CDD:29747" misc_feature order(838819..838824,838882..838884,838990..838992, 839245..839247,839329..839331) /locus_tag="Acear_0768" /note="cobalamin binding residues [chemical binding]; other site" /db_xref="CDD:29747" misc_feature order(838948..838950,839347..839349) /locus_tag="Acear_0768" /note="putative BtuC binding residues; other site" /db_xref="CDD:29747" misc_feature order(838987..838989,839014..839016,839023..839025, 839041..839043,839053..839055,839062..839064, 839068..839073,839080..839082,839089..839094) /locus_tag="Acear_0768" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29747" gene 839593..840639 /locus_tag="Acear_0769" /db_xref="GeneID:9512810" CDS 839593..840639 /locus_tag="Acear_0769" /note="COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: amt:Amet_3618 transport system permease protein; PFAM: transport system permease protein; SPTR: A6TU72 transport system permease protein; PFAM: FecCD transport family" /codon_start=1 /transl_table=11 /product="transport system permease protein" /protein_id="YP_003827373.1" /db_xref="GI:302391553" /db_xref="GeneID:9512810" /translation="MKKNKLKWRGIIASLLVLLAATVVVGTSLGATKIPFQEVVKVLS AKIPFIKDIIEAGQEVGVNETIIFKIRLPRVILAGLVGLALATSGTVFQALLKNPMAD PYVIGISSGASLGATLGMICDLQVNLLGLNSIPMFAFAGALLTTFVVYNLAKVGKKIS VTTLLLAGIAVGSTLSAVVSLLMVFNDQNMHQIVFWIMGSLASKSWSDVSMVWIYILI GYIIVHFLAQDLNIMLLGEDSAQSLGVEVERMKKILLVTGALLAGAAVAGSGVIGFVG LIIPHIVRLLVGPDHRILIPSSALIGAIFLILTDTFARTVIAPTEIPVGIITSLFGGP FFIYLLNKKKGTGF" misc_feature 839854..840612 /locus_tag="Acear_0769" /note="Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+. PBP-dependent ABC transporters consist...; Region: TM_ABC_iron-siderophores_like; cd06550" /db_xref="CDD:119348" misc_feature order(839869..839871,839881..839889,840262..840267, 840271..840279,840283..840288,840292..840309, 840313..840321,840442..840444,840463..840465) /locus_tag="Acear_0769" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119348" misc_feature order(839884..839886,839890..839892,839905..839907, 840079..840081,840085..840090,840097..840102, 840109..840114,840121..840123,840130..840135, 840139..840141,840172..840177,840184..840186, 840412..840414,840568..840570,840577..840582, 840589..840591,840598..840603,840610..840612) /locus_tag="Acear_0769" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119348" misc_feature order(840139..840141,840214..840216,840388..840390, 840400..840402,840532..840534,840559..840561) /locus_tag="Acear_0769" /note="putative PBP binding regions; other site" /db_xref="CDD:119348" gene 840653..841915 /locus_tag="Acear_0770" /db_xref="GeneID:9512811" CDS 840653..841915 /locus_tag="Acear_0770" /note="COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR020322:IPR017871:IPR003439:IPR003593; KEGG: hor:Hore_00190 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0GDX8 ABC transporter; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003827374.1" /db_xref="GI:302391554" /db_xref="GeneID:9512811" /translation="MTAKLEVDKLSYKYGNFEVLKEVSFSVAQGEFIGLIGPNGSGKS TLLKNINSILYPDDGKVYLDNFDLQNLGKKEIAKKLAVVPQNTNVNFDFTVEEIVLMG RAPYIGRFESESDEDYEVVKEAMELTNTLKLAERPISQLSGGERQRVILARSLAQQPE VLLLDEPTSNLDINYQLEIMNLLKKLNRDHNLTVIVVLHDLNLASEYCDKLLLLEDGE IYAHGSPKEIVTAENIEDVYGSKVIIKKHYPSGRPYVTMLDNHYIPETQLDHQVHIIC GGGTGRELIENLVEQGFQVSCGVLNEQDSDWEVAKSCDVEIVAEEPFAPISQESHEAN LAAIKEVDTVVLTEIPFGSGNLLNLKAAFWAAEQGKEVIVMDQERLSKRDYTKGEGNN LYKKLLDMGVIVVGDNYEVLDKLVKDRE" misc_feature 840659..841417 /locus_tag="Acear_0770" /note="ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]; Region: FepC; COG1120" /db_xref="CDD:31317" misc_feature 840668..841321 /locus_tag="Acear_0770" /note="ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC...; Region: ABC_Iron-Siderophores_B12_Hemin; cd03214" /db_xref="CDD:72973" misc_feature 840761..840784 /locus_tag="Acear_0770" /note="Walker A/P-loop; other site" /db_xref="CDD:72973" misc_feature order(840770..840775,840779..840787,840905..840907, 841145..841150,841247..841249) /locus_tag="Acear_0770" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72973" misc_feature 840896..840907 /locus_tag="Acear_0770" /note="Q-loop/lid; other site" /db_xref="CDD:72973" misc_feature 841073..841102 /locus_tag="Acear_0770" /note="ABC transporter signature motif; other site" /db_xref="CDD:72973" misc_feature 841133..841150 /locus_tag="Acear_0770" /note="Walker B; other site" /db_xref="CDD:72973" misc_feature 841157..841168 /locus_tag="Acear_0770" /note="D-loop; other site" /db_xref="CDD:72973" misc_feature 841235..841255 /locus_tag="Acear_0770" /note="H-loop/switch region; other site" /db_xref="CDD:72973" misc_feature 841484..>841756 /locus_tag="Acear_0770" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene 841939..843978 /locus_tag="Acear_0771" /db_xref="GeneID:9512812" CDS 841939..843978 /locus_tag="Acear_0771" /note="COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR001484:IPR012910:IPR000531; KEGG: dat:HRM2_07670 BtuB1; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: C0QJM8 BtuB1; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent siderophore receptor" /codon_start=1 /transl_table=11 /product="TonB-dependent receptor" /protein_id="YP_003827375.1" /db_xref="GI:302391555" /db_xref="GeneID:9512812" /translation="MNKKLVTALVLALVVSLVAAPAVMAEETDKKTDQKQEEVKKEKD EEEKTYTMDELVVIASKHPEKLSEASVSVEKIDEEDIEQKNAHNVADLLRGASSVNIS DYGGHGGSKTINIRGSNAKRVLILVDGQRINDPQTGGVDLSQLPIKQIKKIEILKGPS SSLYGANALGGVVNITTKSGSEKSKTDVEVNFGSFETRKLNLNHSGSTESLKYILSAL KKKSDGYRMNSAMDQERIFTKFSHKLDEYSNLMLSLKCNDFYRRSPGDVETPDPNHYQ KDEDKNINVQLKKQFKNADTKITVYYNKHETDNYNKYYKNSTNPMDFNRYYYDDGNAY YYDEGEKIQVSGISLDEKVSDSDHERGKLGLNFSRTHYYQAHTLTYGGEFYQKEFETV QTGPSITGKYTTEHDQKNKAFFVQDEWQVKDKLKINFGGRYDDNEKFGSEFSPRLGAV YTINSNLNFHASAGEAYKVPTFDDLYWPSTPMGEGNPNLEPETAKAYEMGLRYLNKGL KGEFNLFKKDIDNYIQWAPEDPTAQYSVWKPSNFTSVEITGGELILNKKLTSNYSVKF NYTYLDSNNEKYDKRLSYKPYHMANIGLNYNNQDISFGLNGKYVGDRISADATYASVV KVPGYFVTNLKLSKKLKDNAKISLEINNLFDREYESKKDFLMPGRNVMLNLSREF" misc_feature 842101..843975 /locus_tag="Acear_0771" /note="Outer membrane cobalamin receptor protein [Coenzyme metabolism]; Region: BtuB; COG4206" /db_xref="CDD:33936" misc_feature 842152..843975 /locus_tag="Acear_0771" /note="TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel; Region: ligand_gated_channel; cd01347" /db_xref="CDD:73259" misc_feature order(842152..842181,842209..842238,842275..842292, 842311..842334,842377..842409,842443..842469) /locus_tag="Acear_0771" /note="N-terminal plug; other site" /db_xref="CDD:73259" misc_feature order(842893..842895,842998..843000) /locus_tag="Acear_0771" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:73259" gene 844013..844960 /locus_tag="Acear_0772" /db_xref="GeneID:9512813" CDS 844013..844960 /locus_tag="Acear_0772" /note="COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR003538:IPR006260; KEGG: Gm2129; predicted gene 2129; PFAM: Gram-negative tonB protein; SPTR: C3YUC1 Putative uncharacterized protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain" /codon_start=1 /transl_table=11 /product="TonB family protein" /protein_id="YP_003827376.1" /db_xref="GI:302391556" /db_xref="GeneID:9512813" /translation="MRLLKKSITPLKVAFIIAVGLHLALFNFGSSIVKLDNLAHSQGN FSQKVRFKMAAASAEANPSSSADKEEEKEVEEQKETQEEKQEEQKESEDKVEEQKEVE EEPEPKEEEVKEVKKEELKEQQEPEQEEETEEQEEEMDRETEKKEPKEEKKKEPEPKE QKEDKEEEKSESKEEKKEAPQEKNKEEPEEKKRDEASEPNNATEASGQSSQETKQVDL TEGSKPGVEEPSLIDYKQPEYPERMKKREIEGKVVLKVLIDYEGQVDEITVRKSSGYK QLDLAAKKAAKEWRFNPARKEHQKIGSWILVPIRFRLEA" misc_feature 844715..844951 /locus_tag="Acear_0772" /note="Gram-negative bacterial tonB protein; Region: TonB; cl10048" /db_xref="CDD:195954" gene 844974..845591 /locus_tag="Acear_0773" /db_xref="GeneID:9512814" CDS 844974..845591 /locus_tag="Acear_0773" /note="COGs: COG0811 biopolymer transport protein; InterPro IPR002898; KEGG: pca:Pcar_1505 MotA/TolQ/ExbB proton channel family protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Q3A4F6 MotA/TolQ/ExbB proton channel family protein; PFAM: MotA/TolQ/ExbB proton channel family" /codon_start=1 /transl_table=11 /product="MotA/TolQ/ExbB proton channel" /protein_id="YP_003827377.1" /db_xref="GI:302391557" /db_xref="GeneID:9512814" /translation="MQYLLAKGGVIIYPLLLCSIIVVTLALERLYQFSRISKELSNNL MNQIKDKISSNKVDKAVELCEEVKGPIGKVLKQGILHLDKEPEEIEEQMAEVELEEFP KLEKHLGLLNFIGKISPSLGLLGTVTGMIKTFHVLSMSGKPEQLAQGISEALTTTATG LVISIPALGAYYYFTNKLQQIALHTEKREKELINYIKEVGANDEV" misc_feature 844974..845570 /locus_tag="Acear_0773" /note="Biopolymer transport proteins [Intracellular trafficking and secretion]; Region: TolQ; COG0811" /db_xref="CDD:31153" misc_feature 845016..845561 /locus_tag="Acear_0773" /note="MotA/TolQ/ExbB proton channel family; Region: MotA_ExbB; cl00568" /db_xref="CDD:186086" gene 845581..845982 /locus_tag="Acear_0774" /db_xref="GeneID:9512815" CDS 845581..845982 /locus_tag="Acear_0774" /note="COGs: COG0848 biopolymer transport protein; InterPro IPR003400; KEGG: kko:Kkor_1376 biopolymer transport protein ExbD/TolR; PFAM: biopolymer transport protein ExbD/TolR; SPTR: B4WLJ0 transport energizing protein, ExbD/TolR family; PFAM: biopolymer transport protein ExbD/TolR" /codon_start=1 /transl_table=11 /product="biopolymer transport protein ExbD/TolR" /protein_id="YP_003827378.1" /db_xref="GI:302391558" /db_xref="GeneID:9512815" /translation="MKYKFKRDDLEINLAPMIDVVFLLLIFFIVASTLNLREVKSNIQ LPDTEVVEEKKETEINISVTEEGEVYLGKERVKLTELEERLRNKTEDESIKTLTVFAD KEVAFQKVIQVMDIAKKIEVNNLNFALHKSK" misc_feature 845596..845964 /locus_tag="Acear_0774" /note="Biopolymer transport protein ExbD/TolR; Region: ExbD; cl00537" /db_xref="CDD:193858" gene 846006..846368 /locus_tag="Acear_0775" /db_xref="GeneID:9512816" CDS 846006..846368 /locus_tag="Acear_0775" /note="COGs: COG2138 conserved hypothetical protein; InterPro IPR002762; KEGG: hmo:HM1_2393 sirohydrochlorin cobaltochelatase; PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; SPTR: C4BYB4 Uncharacterized conserved protein; PFAM: CbiX" /codon_start=1 /transl_table=11 /product="cobalamin (vitamin B12) biosynthesis CbiX protein" /protein_id="YP_003827379.1" /db_xref="GI:302391559" /db_xref="GeneID:9512816" /translation="MKTGVVVLGHGSRAEDARSVFNEIVEMIEDKVDYEVVKGASMEL AEPSLEQVVDQIADEVDKISIVPLFLFPGVHIQEDIPELIDGLREDYPEVEFEFGENI GADEKVADIMVERIEEIV" misc_feature 846015..846314 /locus_tag="Acear_0775" /note="Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a...; Region: CbiX_SirB_N; cd03416" /db_xref="CDD:48643" misc_feature order(846033..846035,846228..846230) /locus_tag="Acear_0775" /note="putative active site [active]" /db_xref="CDD:48643" gene 846863..847645 /locus_tag="Acear_0776" /db_xref="GeneID:9512817" CDS 846863..847645 /locus_tag="Acear_0776" /note="COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: tye:THEYE_A1919 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: B5YI78 Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region" /codon_start=1 /transl_table=11 /product="Nickel transport complex, NikM subunit, transmembrane" /protein_id="YP_003827380.1" /db_xref="GI:302391560" /db_xref="GeneID:9512817" /translation="MRRISSILLLSLILVLGVTVAASAHFQMILPSDDVVMQGEEREI DLDLVFTHPMAGHTMDMEKPAKFGVLHKGTKKSLVDTLEPSKIKGRDAFETSYRLRGF GDFVFYVEPEPYWESADGVYITQCTKMVVNSMGVASDWGKEVGMKAEIVPLTRPYGLW TNNVFTGVVKKNGKPVPYAEIEVEYFNEGKFSKLAGNEVTELPNETFTTQVIKADKNG VFTYAMPKSGWWGFAALMEGEPVNGKSHEIGAVMWVKTHDMK" misc_feature 846920..847576 /locus_tag="Acear_0776" /note="ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: CbiK; COG5266" /db_xref="CDD:34863" misc_feature 846926..847582 /locus_tag="Acear_0776" /note="Nickel uptake substrate-specific transmembrane region; Region: NikM; pfam10670" /db_xref="CDD:151174" gene 847746..848384 /locus_tag="Acear_0777" /db_xref="GeneID:9512818" CDS 847746..848384 /locus_tag="Acear_0777" /note="COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: dol:Dole_2022 cobalamin (vitamin B12) biosynthesis CbiM protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; SPTR: A8ZTE3 Cobalamin (vitamin B12) biosynthesis CbiM protein; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM" /codon_start=1 /transl_table=11 /product="cobalamin (vitamin B12) biosynthesis CbiM protein" /protein_id="YP_003827381.1" /db_xref="GI:302391561" /db_xref="GeneID:9512818" /translation="MHISEGVLSAPVLLTGAATTVAGVAVGLKTMDNEDIPKTAIVSS ALFVASLIHIPLGPTSVHLILNGVAGILLGWQVFPAFLIALFLQAVLFQFGGLTSLGM NTINVALPAIVGYYLFKSLLKFNRNDKQLFLGVISFVCGIVPVFLTTIMLAISLVFTN ESFLEVAQLTIVSHLPVMAIEGIISAFAIIFIKRVKPEMLKGVIGKNEEFKI" misc_feature 847746..848351 /locus_tag="Acear_0777" /note="Cobalt uptake substrate-specific transmembrane region; Region: CbiM; cl00397" /db_xref="CDD:185967" gene 848365..849021 /locus_tag="Acear_0778" /db_xref="GeneID:9512819" CDS 848365..849021 /locus_tag="Acear_0778" /note="InterPro IPR010916; KEGG: tye:THEYE_A1921 hypothetical protein; SPTR: B5YI80 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827382.1" /db_xref="GI:302391562" /db_xref="GeneID:9512819" /translation="MKSLKFKKKLSAYIPFTICIALVIALILTLPAYAHRVISYSYVE GDSVVVEGAFDDGSPTKKAKVKVYNSSGKVINKGKTNAQGIYKFEVSKKDDLKIVLEA GMGHKAESNIKQEDLPEVANSSTQQQTKDNSKQSSIQESTTTTGISEDKLRSLIREEL SKELSEKLPQEIAPIKRSLIQLKNKKGPGVTEILGGIGYIFGLMGIAFYFKAKRSEVA " gene 849018..849782 /locus_tag="Acear_0779" /db_xref="GeneID:9512820" CDS 849018..849782 /locus_tag="Acear_0779" /note="COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339:IPR012809; KEGG: dol:Dole_2020 cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; SPTR: A8ZTE1 Cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ" /codon_start=1 /transl_table=11 /product="cobalt ABC transporter, inner membrane subunit CbiQ" /protein_id="YP_003827383.1" /db_xref="GI:302391563" /db_xref="GeneID:9512820" /translation="MIDEKFTEGSTWVHQLDPRIKIVITMMLAVVTAVGKNVDMLLVA FGFSGLLLITARLDIKKVGKRLLIVNSFIFLMWLILPFTYPGEGLFQVGPLIASREGV IYTAKITLRSNTIMLIMISLLSTSAMSSIIHAMKYLYIPEKLIYLLFFIYRYIHVIKT EFGNLYSAMLLRGFKPNTTIHCYKSYAYLVGRLLIKSYERSQRVYEAMTCRGFKGKFY ILDNFNLSSLDYLVFVGSLFLVSCLVMLESGYLMLK" misc_feature 849063..849650 /locus_tag="Acear_0779" /note="Cobalt transport protein; Region: CbiQ; cl00463" /db_xref="CDD:186013" gene 849970..850596 /locus_tag="Acear_0780" /db_xref="GeneID:9512821" CDS 849970..850596 /locus_tag="Acear_0780" /note="COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: tye:THEYE_A1923 cobalt import ATP-binding protein CbiO; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B5YI82 Cobalt import ATP-binding protein CbiO; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003827384.1" /db_xref="GI:302391564" /db_xref="GeneID:9512821" /translation="MIKIRNLSFQYPDGTQILDNFNLTVQENDRIALIGPNGTGKTTL FKIIMGLLIPQEGEVIIFGKQRKEEEDFVEVREKIGFLFQDSDDQLFCSTVEEDIAFG PLNLGKSKEKAMEIVSETLELVDMQGFEKKTPYSLSGGEKRMIAFATILAMKPKLLLL DEPFAGLDKDATEKMLSILTEIDLPYVIISHRNSLVKEVTDDSYYLNR" misc_feature 849970..850566 /locus_tag="Acear_0780" /note="cell division ATP-binding protein FtsE; Region: FtsE; TIGR02673" /db_xref="CDD:131721" misc_feature 849976..850593 /locus_tag="Acear_0780" /note="Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This...; Region: ABC_cobalt_CbiO_domain1; cd03225" /db_xref="CDD:72984" misc_feature 850072..850095 /locus_tag="Acear_0780" /note="Walker A/P-loop; other site" /db_xref="CDD:72984" misc_feature order(850081..850086,850090..850098,850219..850221, 850450..850455,850540..850542) /locus_tag="Acear_0780" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72984" misc_feature 850210..850221 /locus_tag="Acear_0780" /note="Q-loop/lid; other site" /db_xref="CDD:72984" misc_feature 850378..850407 /locus_tag="Acear_0780" /note="ABC transporter signature motif; other site" /db_xref="CDD:72984" misc_feature 850438..850455 /locus_tag="Acear_0780" /note="Walker B; other site" /db_xref="CDD:72984" misc_feature 850462..850473 /locus_tag="Acear_0780" /note="D-loop; other site" /db_xref="CDD:72984" misc_feature 850528..850548 /locus_tag="Acear_0780" /note="H-loop/switch region; other site" /db_xref="CDD:72984" gene 851438..852538 /locus_tag="Acear_0781" /db_xref="GeneID:9512822" CDS 851438..852538 /locus_tag="Acear_0781" /note="COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: afu:AF0432 iron (III) ABC transporter, ATP-binding protein (HemV-2); PFAM: periplasmic binding protein; SPTR: O29817 Iron (III) ABC transporter, ATP-binding protein (HemV-2); PFAM: Periplasmic binding protein" /codon_start=1 /transl_table=11 /product="periplasmic binding protein" /protein_id="YP_003827385.1" /db_xref="GI:302391565" /db_xref="GeneID:9512822" /translation="MKNKKWSILLLIFIFLVFSVITGCTKQTANETKEATEVVTDLND RKVEVPQNVERIVCIGPGALRLITYMNSTDLVVGVEEGEHKDDWGGAYNLAHPEFKDL PIIGPNHGGDAELIAAQNPDVIFLYGDSNKAKNLQQKTGVPVVMLDYTDLGPNRNQGL YKSWRLIGKVLDKEAKAEELIAYTEELIADLKKRTEDIPKKEKPKVYAGAISYHGGHG IISTKVPFPPFTFLNASYVADELGYEEVQSLMINQEKILDWDPEIIFIDESNLNLVKQ DLRKNQEYKSITAIEKGNIYGFLPYASYHRNPATILANTYYMGKVLYPEEFSDIEPDK KANTIFKKFVGKAVYEELAQTYGGFKPIKLKN" misc_feature 851516..852424 /locus_tag="Acear_0781" /note="ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: FepB; COG0614" /db_xref="CDD:30959" misc_feature 851582..852358 /locus_tag="Acear_0781" /note="Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding...; Region: HemV-2; cd01147" /db_xref="CDD:29750" misc_feature 851735..851737 /locus_tag="Acear_0781" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:29750" gene 852574..853641 /locus_tag="Acear_0782" /db_xref="GeneID:9512823" CDS 852574..853641 /locus_tag="Acear_0782" /note="COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000209:IPR010916:IPR000522; KEGG: mbu:Mbur_1048 ABC Fe3+-siderophore transporter, inner membrane subunit; PFAM: transport system permease protein; SPTR: Q12X45 Iron complex/vitamin B12 ABC transporter permease protein; PFAM: FecCD transport family" /codon_start=1 /transl_table=11 /product="transport system permease protein" /protein_id="YP_003827386.1" /db_xref="GI:302391566" /db_xref="GeneID:9512823" /translation="MAKKEGILAEYQKYTGKKVLFGAVLILLLILLTMYSIAVGAVKI PIAEVVTTLLGSNTGNAYTIIWNIRLPRVLAAIAAGMGLSVSGAAMQSILKNPLGSPY TLGISHAAAFGAAFSIVVLGAGSLQSSSADAVILNNPYITTISAFVWALISTGVILIL TKYKNATPETMILTGVALSSLFTAGTTALQYFASDVEIASIVFWTFGDVGRVTWNNLL IISLAVIPSSVYFMYNSWNYSALASGKETAKSLGVNVEKIRLHGMLISSFVTALIVSF VGIIGFVGLVAPHIVRKIIGGDEKYLIPVSCLVGGLLLLASDTAARTVIAPIVLPVGI LTSFLGAPLFIYLVLKGRRYW" misc_feature 852742..853632 /locus_tag="Acear_0782" /note="ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]; Region: CeuC; COG4605" /db_xref="CDD:34236" misc_feature 852790..853617 /locus_tag="Acear_0782" /note="Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+. PBP-dependent ABC transporters consist...; Region: TM_ABC_iron-siderophores_like; cd06550" /db_xref="CDD:119348" misc_feature order(852844..852846,852856..852864,853267..853272, 853276..853284,853288..853293,853297..853314, 853318..853326,853447..853449,853468..853470) /locus_tag="Acear_0782" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119348" misc_feature order(852859..852861,852865..852867,852880..852882, 853081..853083,853087..853092,853099..853104, 853111..853116,853123..853125,853132..853137, 853141..853143,853177..853182,853189..853191, 853417..853419,853573..853575,853582..853587, 853594..853596,853603..853608,853615..853617) /locus_tag="Acear_0782" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119348" misc_feature order(853141..853143,853219..853221,853393..853395, 853405..853407,853537..853539,853564..853566) /locus_tag="Acear_0782" /note="putative PBP binding regions; other site" /db_xref="CDD:119348" gene 853638..854402 /locus_tag="Acear_0783" /db_xref="GeneID:9512824" CDS 853638..854402 /locus_tag="Acear_0783" /note="COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR017871:IPR003439:IPR003593; KEGG: hut:Huta_1821 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C7NSA4 ABC transporter related; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003827387.1" /db_xref="GI:302391567" /db_xref="GeneID:9512824" /translation="MRLEIEGLEFSYQQEDILKNIELELDEGEILGIIGPNGSGKSTL LKCINGILKPDRGDIWLNGKDLAKFSSNEMAQNIGYVPQKENRKFPATVFDTILMGRK PYISWKPTEKDLTIVSEIIDMLYLDSISMRDVNRLSGGQRQKVIMGRALAQQPEVMLL DEPTSDLDLKHQLEVLNVVKDQVAQGISAIIAIHDLSLAGRYCDKIVMLDQGRIFDAG GLEILTPKNIESVYDVKVSVKEHYGRRLVVPEEPIA" misc_feature 853638..854384 /locus_tag="Acear_0783" /note="ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]; Region: FepC; COG1120" /db_xref="CDD:31317" misc_feature 853647..854291 /locus_tag="Acear_0783" /note="ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC...; Region: ABC_Iron-Siderophores_B12_Hemin; cd03214" /db_xref="CDD:72973" misc_feature 853740..853763 /locus_tag="Acear_0783" /note="Walker A/P-loop; other site" /db_xref="CDD:72973" misc_feature order(853749..853754,853758..853766,853884..853886, 854118..854123,854217..854219) /locus_tag="Acear_0783" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72973" misc_feature 853875..853886 /locus_tag="Acear_0783" /note="Q-loop/lid; other site" /db_xref="CDD:72973" misc_feature 854046..854075 /locus_tag="Acear_0783" /note="ABC transporter signature motif; other site" /db_xref="CDD:72973" misc_feature 854106..854123 /locus_tag="Acear_0783" /note="Walker B; other site" /db_xref="CDD:72973" misc_feature 854130..854141 /locus_tag="Acear_0783" /note="D-loop; other site" /db_xref="CDD:72973" misc_feature 854205..854225 /locus_tag="Acear_0783" /note="H-loop/switch region; other site" /db_xref="CDD:72973" gene 854426..855508 /locus_tag="Acear_0784" /db_xref="GeneID:9512825" CDS 854426..855508 /locus_tag="Acear_0784" /note="COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR001378:IPR003814; KEGG: afu:AF0433 hypothetical protein; PFAM: formylmethanofuran dehydrogenase subunit E region; protein of unknown function UPF0066; SPTR: O29816 UPF0066 protein AF_0433; PFAM: Prokaryotic dksA/traR C4-type zinc finger; FmdE, Molybdenum formylmethanofuran dehydrogenase operon; Uncharacterised protein family UPF0066; TIGRFAM: conserved hypothetical protein TIGR00104" /codon_start=1 /transl_table=11 /product="formylmethanofuran dehydrogenase subunit E region" /protein_id="YP_003827388.1" /db_xref="GI:302391568" /db_xref="GeneID:9512825" /translation="MEIESIGTVKSKFDEPADPEEMQKEESTIIIKPEYEEGLYRIED NDYLQVAFQFHLSDSYELKAPRRHGRVRGVFASRSPNRPSSIGTTCVELLERQGRRLK IKGLDAVDGTPILDLKPYAAIMDKPDDDFADKKEDPRAEINHLIRSHDLESLLIKAGE LHGHFCPYVSLGVIAGAYALDELGLKSAGMEDVVAIVETNSCFSDGVQYATGCSFGNN ALIYRDYGKTAVTVAKRDGTGIRLYVKDNDELLSEYPEAEELFDKVIVNRAGTKEDKK RINQLWNEIAFELIRKPVDELFNIEEVNAELSEYAPIFEDAFCNDCGEKIMGPKAVSK EDKDLCISCADADYLQLDGRGLVEVE" misc_feature 854441..854785 /locus_tag="Acear_0784" /note="Escherichia coli YaeB and related proteins; Region: UPF0066; cd09281" /db_xref="CDD:187753" misc_feature order(854441..854443,854537..854545,854549..854551, 854570..854572,854582..854584,854642..854659, 854669..854671,854675..854677,854681..854683, 854768..854785) /locus_tag="Acear_0784" /note="homodimer interaction site [polypeptide binding]; other site" /db_xref="CDD:187753" misc_feature order(854579..854581,854585..854590,854657..854659, 854681..854683,854687..854689,854744..854746, 854759..854761) /locus_tag="Acear_0784" /note="cofactor binding site; other site" /db_xref="CDD:187753" misc_feature 854879..855472 /locus_tag="Acear_0784" /note="Formylmethanofuran dehydrogenase subunit E [Energy production and conversion]; Region: COG2191" /db_xref="CDD:32374" misc_feature 854903..855331 /locus_tag="Acear_0784" /note="FmdE, Molybdenum formylmethanofuran dehydrogenase operon; Region: FmdE; pfam02663" /db_xref="CDD:190380" gene 855537..856055 /locus_tag="Acear_0785" /db_xref="GeneID:9512826" CDS 855537..856055 /locus_tag="Acear_0785" /note="COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR012349:IPR002563:IPR009002; KEGG: mac:MA3322 hypothetical protein; PFAM: flavin reductase domain protein FMN-binding; SPTR: Q8TKS4 Putative uncharacterized protein; PFAM: Flavin reductase like domain" /codon_start=1 /transl_table=11 /product="flavin reductase domain protein FMN-binding protein" /protein_id="YP_003827389.1" /db_xref="GI:302391569" /db_xref="GeneID:9512826" /translation="MELEPDELQEVLPLPMTVITTTNSEGIDNAAPYGCVMPILRPLN LVALASALPRDTLANIRETEEFVINVMGKPGYQESMKCSKDFPKEVNELTEVGLETTS SLEVTPPRIKKAIGWIEARLEREVEGDDYVIVLGEAVSVEVNDEYLEEDEITEDPLVM FSSNFKQLGDSI" misc_feature 855567..856040 /locus_tag="Acear_0785" /note="Flavin Reductases; Region: FlaRed; cl00801" /db_xref="CDD:193940" gene 856173..857279 /locus_tag="Acear_0786" /db_xref="GeneID:9512827" CDS 856173..857279 /locus_tag="Acear_0786" /note="COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: tsi:TSIB_1863 HemV-3 iron (III) ABC transporter, ATP-binding protein; PFAM: periplasmic binding protein; SPTR: C5ZZT1 HemV-3 iron (III) ABC transporter, ATP-binding protein; PFAM: Periplasmic binding protein" /codon_start=1 /transl_table=11 /product="periplasmic binding protein" /protein_id="YP_003827390.1" /db_xref="GI:302391570" /db_xref="GeneID:9512827" /translation="MNKIKQYGIVVMMLALLLVVGGCAGQQAEEKIETVKIEDMVGRE VEVPKEVDKTIGVGAGALRLITYLEATDKVVGVEQFEKRDQNRPYIMGHPELTELPSI GPIHGGDAELIAAQSPDVIFATYTDGSTADSLQEKTGIPVVVLSYGGPSTMERDTYYK GLKLMAEVLNKEDRAEELIQYTEDVIDDLQQRTEDIAKADKPKVYAGGIGQRGSHGIV STEPAYPSFEFINANNVASPLGMEHAMVSKEKLLEWDPEIIFVDEGGYSLVVEDLKSP EYESISAVENGELYGVLPYNYYTTNFETVLINSYYMGKIIYPEQFSDIASEKKADKIY EKFVGAPVYDQMQEAFGGYKRIDLQQAIKEVENK" misc_feature 856311..857075 /locus_tag="Acear_0786" /note="Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding...; Region: HemV-2; cd01147" /db_xref="CDD:29750" misc_feature 856374..857045 /locus_tag="Acear_0786" /note="Periplasmic binding protein; Region: Peripla_BP_2; pfam01497" /db_xref="CDD:144914" misc_feature 856461..856463 /locus_tag="Acear_0786" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:29750" gene 857317..858408 /locus_tag="Acear_0787" /db_xref="GeneID:9512828" CDS 857317..858408 /locus_tag="Acear_0787" /note="COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: afu:AF0432 iron (III) ABC transporter, ATP-binding protein (HemV-2); PFAM: periplasmic binding protein; SPTR: C6NPI9 Periplasmic binding protein; PFAM: Periplasmic binding protein" /codon_start=1 /transl_table=11 /product="periplasmic binding protein" /protein_id="YP_003827391.1" /db_xref="GI:302391571" /db_xref="GeneID:9512828" /translation="MQKKKWFSLLVVTVVSMSVLIGGCADNQAQQTVEKTEITDLSDR KVEIPRQVDRIVALGSGALRQIVYLGAADKVVGVEEIEHRKDNYAPYNLAHQEFRDLP TVGPNHGGDAELIAAQAPDVIFFKGDPGEAKDLQQKTGIPVINLAVGDFPRRDEVLYQ SWRLIGKILDREERVEELIQYMEDSIADLKERTVGISDQQKPEVYAGGITHRGGHGIA GAKEPFPPFQFVQAKNVAGELGHKEVTSVMVSREKILDWNPEIIFINSANEKLVKGDL QKHSEYKSLTAIEEDKVYGVLPYSYYHRNFGSILANSYYIGKILYPDRFSDIDPAAKA DEIYKEFIGKAVYDQMEEKVGGFKRVKLD" misc_feature 857377..858297 /locus_tag="Acear_0787" /note="ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: FepB; COG0614" /db_xref="CDD:30959" misc_feature 857458..858231 /locus_tag="Acear_0787" /note="Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding...; Region: HemV-2; cd01147" /db_xref="CDD:29750" misc_feature 857611..857613 /locus_tag="Acear_0787" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:29750" gene 858943..859644 /locus_tag="Acear_0788" /db_xref="GeneID:9512829" CDS 858943..859644 /locus_tag="Acear_0788" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827392.1" /db_xref="GI:302391572" /db_xref="GeneID:9512829" /translation="MKRIIGEQKVQKEEINNEKISIVLALVLIVTMAVPAMALEFQKG KMKVENKYKDVDDSNEDGSGTKAKTYLFLKQQVDKQVSIFTLLRVDYDFANQKSTETK TFIRKGWINVENAVGPLDFRAGRLDEAAANNLLYDMERKYEFARATYDSKDFAIKAGH SFEDKNAGKIFFTEAKAKNLGLFETVTLNYVDNNELAYEGYSVASAKEFGVANLDFTY GDADNDADDLTSNAK" gene 859860..860651 /locus_tag="Acear_0789" /db_xref="GeneID:9512830" CDS 859860..860651 /locus_tag="Acear_0789" /note="COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: tye:THEYE_A1919 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: B5YI78 Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region" /codon_start=1 /transl_table=11 /product="Nickel transport complex, NikM subunit, transmembrane" /protein_id="YP_003827393.1" /db_xref="GI:302391573" /db_xref="GeneID:9512830" /translation="MKRTSSILLLSLVLVLGVTLTASAHFQMILPSDDVVMKGEEQTI DLNLLFTHPMSAAEVMDMEQPNKFGVIHKGNRTSLLDSLQSKEFMGGKGYTTSYQLER FGDYTFYLQPGPYWEPAESKYITHCTKVVVNSMGVSQNWDQEIGMKAEIVPLTRPYGL WTNNTFRGVVMKNGKPVPNAEVEVEYFNQAKFDSLKQDTYESVELPADVFTTQVIKAD KNGVFSYSMPKAGWWGFAALMEGEPINGKSHELGALMWVKTYDMK" misc_feature 859923..860588 /locus_tag="Acear_0789" /note="Nickel uptake substrate-specific transmembrane region; Region: NikM; pfam10670" /db_xref="CDD:151174" misc_feature 859923..860582 /locus_tag="Acear_0789" /note="ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: CbiK; COG5266" /db_xref="CDD:34863" gene complement(860717..860947) /locus_tag="Acear_0790" /db_xref="GeneID:9512831" CDS complement(860717..860947) /locus_tag="Acear_0790" /note="KEGG: dau:Daud_0652 hypothetical protein; SPTR: B1I2P5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827394.1" /db_xref="GI:302391574" /db_xref="GeneID:9512831" /translation="MSCNSMRHKFQQEKDNLNFAQAMEIYQDVKGSIATHKTELEELK ESNAEQEEINHLKKHINEGEKLLQEINSMQLH" gene 861247..861855 /locus_tag="Acear_0791" /db_xref="GeneID:9512832" CDS 861247..861855 /locus_tag="Acear_0791" /note="COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: dol:Dole_2022 cobalamin (vitamin B12) biosynthesis CbiM protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; SPTR: A8ZTE3 Cobalamin (vitamin B12) biosynthesis CbiM protein; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM" /codon_start=1 /transl_table=11 /product="cobalamin (vitamin B12) biosynthesis CbiM protein" /protein_id="YP_003827395.1" /db_xref="GI:302391575" /db_xref="GeneID:9512832" /translation="MHISEGVLSAPVLVAGAAATAAGVGVGLTGMSDEDIPKTAIVSS ALFVASLIHIPLGPTNLHLVLNGIGGILLGWQIFPAFLVALSLQAILFQFGGITVLGI NTFNLALPAVASYYLFKLLLNFNRSDKELVLGGIALICGIVAVFLSTIMLAISLVFTN ESFLEIAKLTVVSQLPLMLVEGISSAFIITFINKAKPEILEG" misc_feature 861247..861852 /locus_tag="Acear_0791" /note="Cobalt uptake substrate-specific transmembrane region; Region: CbiM; cl00397" /db_xref="CDD:185967" gene 861862..862542 /locus_tag="Acear_0792" /db_xref="GeneID:9512833" CDS 861862..862542 /locus_tag="Acear_0792" /note="KEGG: dba:Dbac_3137 hypothetical protein; SPTR: C7LX02 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827396.1" /db_xref="GI:302391576" /db_xref="GeneID:9512833" /translation="MFKVESNKRSLLSIFFSVVVILLLTLVLTLPAYAHRIVSYAYTE GDEVVVEGAYGNGSPVKDCKVVVYDSQENVVYEGRTDSQGIAKFKVPKKSDLKIIMDS GTGHKSESIIEKEELSEIKPENKFHSNKENSSTQKVTQDNNSAKESGVETTGISEDKL RKIIQEEVSEELSGQLSNDIASIKRDLVRLKKKKGPGVVEILGGLGYIMGLMGIGLYF KTKGDEQA" misc_feature 861970..>862143 /locus_tag="Acear_0792" /note="Large extracellular alpha-helical protein [General function prediction only]; Region: COG2373" /db_xref="CDD:32520" gene 862539..863276 /locus_tag="Acear_0793" /db_xref="GeneID:9512834" CDS 862539..863276 /locus_tag="Acear_0793" /note="COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339:IPR012809; KEGG: tye:THEYE_A1922 cobalt ABC transporter, permease protein CbiQ; PFAM: cobalt transport protein; SPTR: B5YI81 Cobalt ABC transporter, permease protein CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ" /codon_start=1 /transl_table=11 /product="cobalt ABC transporter, inner membrane subunit CbiQ" /protein_id="YP_003827397.1" /db_xref="GI:302391577" /db_xref="GeneID:9512834" /translation="MINEDFAEGSSWIHNLDPRIKIIVAIMLAVVTAVEKDLSVLLQI FTAVCFILITARLNGKEILKRLLMINIFIFLIWLFLPFTYPGEVLFHFGPLTASYEGV IYTLQITLRSNAIMLIVISLLSTSTITSLIHAMDYLYIPQKLIYLFFFIYRYLYVIRD EFYTLRNAMLLRGFKRETSIRCYKSYAYLMGMLLIRSYERATRVYEAMICRGFNGQFY LMDDFSLSTLDHIVFAGSICLVSWVLV" misc_feature 862584..863171 /locus_tag="Acear_0793" /note="Cobalt transport protein; Region: CbiQ; cl00463" /db_xref="CDD:186013" gene 863756..864553 /locus_tag="Acear_0794" /db_xref="GeneID:9512835" CDS 863756..864553 /locus_tag="Acear_0794" /note="COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339:IPR012809; KEGG: dae:Dtox_3734 cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; SPTR: C6Q7P4 Cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ" /codon_start=1 /transl_table=11 /product="cobalt ABC transporter, inner membrane subunit CbiQ" /protein_id="YP_003827398.1" /db_xref="GI:302391578" /db_xref="GeneID:9512835" /translation="MLDIDQYAYSNQLRQVHPVEKALFTFMTMLVCLVANSIITSLAV ITLMVGVVIFKAEIPLQFLIKLLLLPISFLFLATVTVVITITNSGGDFLFYFNLFGWK IGVGAGSLIKALNLFLKSLGTVSCLYFLALTTPMVELLSILKRLKIPKIFIELMILIY RFIFVLLETANLIRVSQVSRLGYSSFKNSFYSLSKLVSNLFVRSYYRAKGLLTTLLAR GYEGEIKVLEPDYEYSKKNFVLIFVAEILLIILTIYVGGGDFVIINT" misc_feature 863801..864409 /locus_tag="Acear_0794" /note="Cobalt transport protein; Region: CbiQ; cl00463" /db_xref="CDD:186013" gene 864534..865364 /locus_tag="Acear_0795" /db_xref="GeneID:9512836" CDS 864534..865364 /locus_tag="Acear_0795" /note="COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593:IPR005876; KEGG: dae:Dtox_3733 cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1TIW9 Cobalt transport protein ATP-binding subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit" /codon_start=1 /transl_table=11 /product="cobalt ABC transporter, ATPase subunit" /protein_id="YP_003827399.1" /db_xref="GI:302391579" /db_xref="GeneID:9512836" /translation="MSSSILKAEDIVFEYPNGTRALDCLSIDIEEGKKVAILGANGAG KSTLFLHFNGILQPDEGRIQFKGETVSYDNKFLKRLREKVGIVFQDPDMQLFSANVFQ EISFGPLNLDLSDEEVENRVYEAMEVTETTDLKERPTHLLSYGQKKRISIADILAMKP EVIVFDEPTVWLDPKSSIEIVDFFNEINKQGITVILSTHNVDLAYSWADYIYIFAEGN IISEGKPEEVFQKQDLLDTADLIQPWIIEVYDHLIDKGVINSDTPLPNSKEELFTLIS " misc_feature 864546..865322 /locus_tag="Acear_0795" /note="cobalt transporter ATP-binding subunit; Provisional; Region: cbiO; PRK13639" /db_xref="CDD:184199" misc_feature 864552..865184 /locus_tag="Acear_0795" /note="Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This...; Region: ABC_cobalt_CbiO_domain1; cd03225" /db_xref="CDD:72984" misc_feature 864648..864671 /locus_tag="Acear_0795" /note="Walker A/P-loop; other site" /db_xref="CDD:72984" misc_feature order(864657..864662,864666..864674,864798..864800, 865029..865034,865128..865130) /locus_tag="Acear_0795" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72984" misc_feature 864789..864800 /locus_tag="Acear_0795" /note="Q-loop/lid; other site" /db_xref="CDD:72984" misc_feature 864957..864986 /locus_tag="Acear_0795" /note="ABC transporter signature motif; other site" /db_xref="CDD:72984" misc_feature 865017..865034 /locus_tag="Acear_0795" /note="Walker B; other site" /db_xref="CDD:72984" misc_feature 865041..865052 /locus_tag="Acear_0795" /note="D-loop; other site" /db_xref="CDD:72984" misc_feature 865116..865136 /locus_tag="Acear_0795" /note="H-loop/switch region; other site" /db_xref="CDD:72984" gene 865532..865807 /locus_tag="Acear_0796" /db_xref="GeneID:9512837" CDS 865532..865807 /locus_tag="Acear_0796" /note="KEGG: rxy:Rxyl_3159 hypothetical protein; SPTR: Q1ARB2 Putative uncharacterized protein; PFAM: protein of unknown function (DUF3311)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827400.1" /db_xref="GI:302391580" /db_xref="GeneID:9512837" /translation="MEESDDKQVPLTPIFFPDTISEKKKKQSIFWVIYFAIVILAQVW PIYLIGNRIHPIILGMPFSMVWIVIWTGVFAFIGLLIRYKQEFGGEN" gene 865808..867283 /locus_tag="Acear_0797" /db_xref="GeneID:9512838" CDS 865808..867283 /locus_tag="Acear_0797" /note="COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: rxy:Rxyl_3158 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Q1ARB3 Na+/solute symporter; PFAM: Sodium:solute symporter family" /codon_start=1 /transl_table=11 /product="Na+/solute symporter" /protein_id="YP_003827401.1" /db_xref="GI:302391581" /db_xref="GeneID:9512838" /translation="MSTSVIVLLVIAAYLVIVLATGIRAGIGQENDIKEYVAASGSLG LVIMYFLMGGAIYSAFAFLGGPGWAYSKGAASFYIMAYCGLGLVPWLIWGPRTYRLGR KYGYVTQAELVSDRFQSKALSAIMAIVSILAFIQYIALQLKGMAYVINVTTGGMIPFW LGALMAYGVVLIYVLTSGVRGVGWTNVLQASMMIIMGWVLGIWLTFKFHGGPTAMFQQ IAETSPTHLLVGGSQMSWPAFSSALLVSILGFTMWPHLFMKAYTSNSEKTIKRTILFY PTFAIFMVPVLFIGFSGIGVVASESLEAADQILPTMLMQLDLPAWGLGLVAAGTLAAA MSSSDTITHGAASVYTMDFHRKVINSDLDDRKSVIVTRIAVVIFTSVAYYIAVFGAKS LVAILLGAYGSIVQFFPLVAATFFWPRATKQGAIAGLLTGVVVNTYISLVGPVPLEIN PGIWGLLANIVVFIFVSLLTKPNDMEHIKKFTEEATVPVDK" misc_feature 865871..867223 /locus_tag="Acear_0797" /note="Sodium:solute symporter family; Region: SSF; cl00456" /db_xref="CDD:186007" misc_feature 865910..867280 /locus_tag="Acear_0797" /note="Predicted symporter [General function prediction only]; Region: DhlC; COG4147" /db_xref="CDD:33899" gene 867367..868548 /locus_tag="Acear_0798" /db_xref="GeneID:9512839" CDS 867367..868548 /locus_tag="Acear_0798" /EC_number="3.5.1.14" /note="COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterProIPR017439:IPR001412:IPR002933:IPR011650:IPR 010168; KEGG: dth:DICTH_1768 thermostable carboxypeptidase 1; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: Aminoacylase; SPTR: C4CJY7 Amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain; TIGRFAM: amidohydrolase" /codon_start=1 /transl_table=11 /product="amidohydrolase" /protein_id="YP_003827402.1" /db_xref="GI:302391582" /db_xref="GeneID:9512839" /translation="MKNLTDRISDFEEDLITIRREFHKHPETAFNEYETADRIADYLN DWGLEVKTEVGKTGVVGLLRGSNPGKTIAIRVDIDALPIEEETGFEFASQNEGIMHAC GHDGHIAVGLGAAKILSEYREELNGNVKFIFQPAEEILSGSEAMLEDGVLSEPEVDAI LGLHIWPDIESGSVGIKEGPVMAAVDKFEVEIKGKGGHGAIPNKSIDPIVMGSEAVKS LQKIVSREISPLDSAVITVGTFNAGTAFNVIPDKVELSGTVRTFDSEVRKFISNRIEG IIANVTEGARGEYNLDYEFGIPATVNDARFTAQTKKVAEDILGTDRVVEDIEPSMGGE DFSLYQQEVPGTYLFLGTYNEDKGLTDSIHHPEFSIDEDILSIGVKVFSEIVFDFFKN D" misc_feature 867397..868545 /locus_tag="Acear_0798" /note="Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]; Region: AbgB; COG1473" /db_xref="CDD:31662" misc_feature 867409..868524 /locus_tag="Acear_0798" /note="M20 Peptidase Aminoacylase 1 family; Region: M20_Acy1; cd03886" /db_xref="CDD:193507" misc_feature order(867670..867672,867676..867678,867778..867780, 867856..867858,868456..868458) /locus_tag="Acear_0798" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193507" misc_feature order(867925..867927,867991..867996,868006..868008, 868015..868017,868024..868026,868075..868095, 868105..868110,868114..868116,868132..868140) /locus_tag="Acear_0798" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:193507" gene 868581..869717 /locus_tag="Acear_0799" /db_xref="GeneID:9512840" CDS 868581..869717 /locus_tag="Acear_0799" /EC_number="2.7.1.31" /note="COGs: COG1929 Glycerate kinase; InterPro IPR018193:IPR004381; KEGG: hor:Hore_22950 glycerate kinase; PFAM: glycerate kinase; PRIAM: Glycerate kinase; SPTR: B8D188 Glycerate kinase; TIGRFAM: glycerate kinase; PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase" /codon_start=1 /transl_table=11 /product="glycerate kinase" /protein_id="YP_003827403.1" /db_xref="GI:302391583" /db_xref="GeneID:9512840" /translation="MKVLIALDSFKGSLTALEAAESLERGLKKADLQFEIEKLPMADG GEGTVRSLVDATEGRIVKEEVTGPLGDRVEAFFGILGDDNTAVIEMAAASGLPLVSED DRDPTKTTTYGTGELIKAALNEGCRKLIIGIGGSATNDCGVGMAQALGGNFVDKNGKE VGFGGGELKSIKRIDLSGMDARIKETEIQVACDVDNPLYGKEGAAYVYAPQKGADPEM VEELDEGLRHIADIINRDLEVAVDSISGAGAAGGLGAGLVAFLEGELKPGIDVVIEAT GIEKRVKEADIVITGEGMIDSQTVFGKTPIGVAKVAKKHSLPVVGVAGSLGAGADKVY EHGIDALFSITNAPMSLDKAMDKASILLESLGENIGRMLKISSA" misc_feature 868584..869708 /locus_tag="Acear_0799" /note="Glycerate kinase family; Region: Gly_kinase; cl00841" /db_xref="CDD:186217" gene complement(869697..870599) /locus_tag="Acear_0800" /db_xref="GeneID:9512841" CDS complement(869697..870599) /locus_tag="Acear_0800" /note="COGs: COG1313 Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating protein; InterPro IPR016431:IPR007197; KEGG: gur:Gura_2282 radical SAM domain-containing protein; PFAM: radical SAM domain protein; SPTR: A5G3U4 radical SAM domain protein; PFAM: radical SAM superfamily" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003827404.1" /db_xref="GI:302391584" /db_xref="GeneID:9512841" /translation="MPTSNYLDLYQSGKLAKRVEKAYEILQDCTLCPHHCHVNRSNDE LGYCQTGSEIKVASYGPHFGEEEPLVGSNGSGTIFFSSCNLRCVYCQNYDISQHQSGD AVTVEELAEIMISLQKRGCHNINFVTPSHMIHALLAATLEACKKGLEIPLVYNSGGYD DKEALGLLDGIIDIYMPDVKYIDENTALKYSKIPDYPPIVKTALKEMHQQVGDLKIKD NVAVQGLLIRHLILPNNLAGTKEIIDFIADELSTDTYINIMDQYYPAYKAADYKVLNR RTNTSEFEEAVEIAQNKGLSRRYL" misc_feature complement(869862..870371) /locus_tag="Acear_0800" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene 870670..871305 /locus_tag="Acear_0801" /db_xref="GeneID:9512842" CDS 870670..871305 /locus_tag="Acear_0801" /note="COGs: COG0586 hypothetical protein; KEGG: sso:SSO2787 hypothetical protein; SPTR: C4CKS5 Uncharacterized hypothetical protein; PFAM: SNARE associated Golgi protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827405.1" /db_xref="GI:302391585" /db_xref="GeneID:9512842" /translation="MNCEVKKVDFNSLIALIIDLSSQYGYLIIFLSAVGEGMGLPIPD GIILAISSYFVFNGQMSVLGLVSYFVLGSIIGNLTAYSIGRWSKGWLKESSLFKLDES DRMDRIEYLFSRYGIWALLITQIFSRVLRVPMIYAAGFQEMNILKYSAVCIAGNFVWG MAWVLGGLYVSSNWTKLEELMTSYKNLQFLVVGLVVVIFYLFYRRAQVENG" misc_feature 870727..871284 /locus_tag="Acear_0801" /note="Uncharacterized membrane-associated protein [Function unknown]; Region: DedA; COG0586" /db_xref="CDD:30931" misc_feature 870793..871170 /locus_tag="Acear_0801" /note="SNARE associated Golgi protein; Region: SNARE_assoc; cl00429" /db_xref="CDD:193815" gene 871370..871446 /locus_tag="Acear_R0071" /db_xref="GeneID:9512843" tRNA 871370..871446 /locus_tag="Acear_R0071" /product="tRNA-Pro" /db_xref="GeneID:9512843" gene complement(871541..871653) /locus_tag="Acear_0802" /pseudo /db_xref="GeneID:9512844" gene 871739..872134 /locus_tag="Acear_0803" /db_xref="GeneID:9512845" CDS 871739..872134 /locus_tag="Acear_0803" /note="KEGG: cts:Ctha_0426 hypothetical protein; SPTR: B3QUJ1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827406.1" /db_xref="GI:302391586" /db_xref="GeneID:9512845" /translation="MFYLLLVVTFLVALISCYIVIKAFDEPIDNILSKIVTDDISKAW TKYIKFAIYVVGISGGVRIWEIEKYITAPSGPRENTKAIILTPERWTLEIYRTLIGSL KSIAWMLLMFFGFTLVAYVALKVFGKREV" gene 872182..872691 /locus_tag="Acear_0804" /db_xref="GeneID:9512846" CDS 872182..872691 /locus_tag="Acear_0804" /note="KEGG: nth:Nther_0757 hypothetical protein; SPTR: B2A7P5 Putative uncharacterized protein; PFAM: protein of unknown function (DUF3231)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827407.1" /db_xref="GI:302391587" /db_xref="GeneID:9512846" /translation="MNINFFDKLFKNLKSEKEQISSNETFHIWNSLRVRYISTETYNL YKNFIHDKDLEILINEHLEQFNQEIEQLENLTNNYQIKAPDRPAEDINTTKQLDQITD RYIFRKIYADLISELHYLIRPVTESISNDNVRDFFSNMLFNHLDMLDEFYKYGKLKGW TTMQPKHYS" gene 872817..873032 /locus_tag="Acear_0805" /db_xref="GeneID:9512847" CDS 872817..873032 /locus_tag="Acear_0805" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827408.1" /db_xref="GI:302391588" /db_xref="GeneID:9512847" /translation="MTFAEKAADEASQTINEGKSEDEYNSKWLKAVVGAMDYLVKNAQ LLGGATNREEQTEQVTQREEYDFIRYL" gene 873240..873758 /locus_tag="Acear_0806" /db_xref="GeneID:9512848" CDS 873240..873758 /locus_tag="Acear_0806" /note="InterPro IPR012347:IPR009078; KEGG: aoe:Clos_1705 hypothetical protein; SPTR: A8MGM2 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2383)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827409.1" /db_xref="GI:302391589" /db_xref="GeneID:9512848" /translation="MQDNNQQQETAAGESAPNQVENNKEVVVTLNKVLKGEHMAIDTY DQYLDRIDDSQTKDLLQQFKEDHQKHASKLAQRIEDLGADPQENSGLSGLVSKTMMEI GDLLGMEPSEEEAVNKIYQGEDMGINLVEENLIEKLDKKSKDLVSEVLQTDKQHLEQF KQFSDQNLESQQ" misc_feature 873327..873728 /locus_tag="Acear_0806" /note="Ferritin-like superfamily of diiron-containing four-helix-bundle proteins; Region: Ferritin_like; cd00657" /db_xref="CDD:153097" misc_feature order(873348..873350,873438..873440,873447..873449, 873606..873608,873696..873698,873705..873707) /locus_tag="Acear_0806" /note="dinuclear metal binding motif [ion binding]; other site" /db_xref="CDD:153097" gene 873897..874151 /locus_tag="Acear_0807" /db_xref="GeneID:9512849" CDS 873897..874151 /locus_tag="Acear_0807" /note="KEGG: nth:Nther_0724 hypothetical protein; SPTR: B2A7C0 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827410.1" /db_xref="GI:302391590" /db_xref="GeneID:9512849" /translation="MEDEELFADPIILGAVAGVIGNIPKTILTITFYYFGWVRYTFSQ LAAGLFMKQEVLSNPLGQKVKNPPLFIWVMNLLTYSLIQY" gene 874338..875639 /locus_tag="Acear_0808" /db_xref="GeneID:9512850" CDS 874338..875639 /locus_tag="Acear_0808" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: tex:Teth514_2350 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003827411.1" /db_xref="GI:302391591" /db_xref="GeneID:9512850" /translation="MKLAKYFIHKPNQTQQIVLGCLAYASARLYNIGNYQRKNWSKDS AKNYPDWYKQKKQLKEKFWYKNLPSQTAQETLKILADNWDSFYQSKKDYQNNPDKYTG EPNPPNYKPKDSKFNFRYLNNGFKIIDGKLRLSIPKQLKKYLKEEYSITNKFLWIRVP NELLSSNRDVLNSTTRIEFKPLSDDTYKVILTYKVDTPTIKEDNGNYLSIDLGINNLM TCYSNQNQESFIIDGGQYLAINRYFDKKIKHYQSILNGQGKKTSKRIQNLYKKRRKQL FHLIHSATKKVVNYCIENNISRVIVGDIKNIRDDADLGKQNNQKLHKLPFDIIYHQLE YKLNLQGITLIKKSEKYTSQCSPYSKKVTKKYANKSNRVKRGLYIDKDNNQAFNADSI GAFNILRKYLQQRRKGPDITLQVKGLSNPVKYNWNNHQFAA" misc_feature 874338..875543 /locus_tag="Acear_0808" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature 874524..875261 /locus_tag="Acear_0808" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature 875151..875396 /locus_tag="Acear_0808" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature 875313..875537 /locus_tag="Acear_0808" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 875899..876975 /locus_tag="Acear_0809" /db_xref="GeneID:9512851" CDS 875899..876975 /locus_tag="Acear_0809" /EC_number="1.1.1.6" /note="COGs: COG0371 Glycerol dehydrogenase; InterPro IPR016205:IPR018211:IPR016160:IPR001670; KEGG: kol:Kole_0505 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: C4IIN3 Glycerol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase" /codon_start=1 /transl_table=11 /product="glycerol 2-dehydrogenase (NAD+)" /protein_id="YP_003827412.1" /db_xref="GI:302391592" /db_xref="GeneID:9512851" /translation="MTRILISPNKYVQGKGVIKELGEYLDDFGEKVLALCDPVVLELF TDKVKEGLANKDVKLEEFNGEASKKEIDRLKEMVQKEKIEVVVGIGGGKTLDTAKAVS YYAGLPVGIVPTIAATDAPCSALSVIYTEDGVFEEYLFLPSNPDLVLVDTKIVAKAPV RFLVSGMGDALATYFEADACSVTKAPNIPGGTQTITATNLAKLCYDTLIEYGTAAKEA VEAEAVTEAVEKIVEANTLLSGLGFESGGLAAAHAIHNGFTVLEETHSKTHGEKVAYS TIVQLVMEDRPPELIEEVIRFCKEVGLPTTLVDLGIEEINEEDILKVAETSSVEDETI HNMPFEVDAEMVKDAILAVDRLGK" misc_feature 875920..876966 /locus_tag="Acear_0809" /note="Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation; Region: GlyDH; cd08170" /db_xref="CDD:173929" misc_feature 875920..876936 /locus_tag="Acear_0809" /note="Iron-containing alcohol dehydrogenase; Region: Fe-ADH; pfam00465" /db_xref="CDD:189559" misc_feature order(875923..875931,875935..875940,876505..876507, 876514..876516,876583..876588,876595..876597) /locus_tag="Acear_0809" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173929" misc_feature order(876007..876009,876169..876177,876184..876186, 876193..876195,876238..876243,876247..876249, 876304..876309,876358..876360,876382..876384, 876403..876405,876415..876417,876652..876654, 876664..876666,876703..876705) /locus_tag="Acear_0809" /note="active site" /db_xref="CDD:173929" misc_feature order(876403..876405,876652..876654,876703..876705) /locus_tag="Acear_0809" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173929" gene 877825..878358 /locus_tag="Acear_0810" /db_xref="GeneID:9512852" CDS 877825..878358 /locus_tag="Acear_0810" /note="COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: amt:Amet_3696 nitroreductase; PFAM: nitroreductase; SPTR: Q3A439 Nitroreductase; PFAM: Nitroreductase family" /codon_start=1 /transl_table=11 /product="nitroreductase" /protein_id="YP_003827413.1" /db_xref="GI:302391593" /db_xref="GeneID:9512852" /translation="MLSLLKKRRSIRKYQNREVENEKVEKLIKAALLSPSSRGFEPWE FIVVDDKESLNQLADAKEAGSAFLDGAPVGIVVCADPEVSDVWIEDTSIASINIQLAA EDLGLGSCWIQIRNRNHSAEKTSSEYVKEVLSIPDNLEVESIIAIGYADEEKPPHKED DLNYQKIFRNSYGSSSY" misc_feature 877825..878310 /locus_tag="Acear_0810" /note="NAD(P)H:flavin oxidoreductase-like family 2. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes...; Region: NADPH_oxidoreductase_2; cd02151" /db_xref="CDD:48396" misc_feature order(877846..877848,877852..877854,877858..877860, 877936..877938,878161..878166) /locus_tag="Acear_0810" /note="putative FMN binding site [chemical binding]; other site" /db_xref="CDD:48396" gene 878427..878660 /locus_tag="Acear_0811" /db_xref="GeneID:9512853" CDS 878427..878660 /locus_tag="Acear_0811" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827414.1" /db_xref="GI:302391594" /db_xref="GeneID:9512853" /translation="MKNELNTDDLDSSNDDGIDSIKELWDELMDNNKTDEESGFIPEN EEEAEKMLEEMKECGCIDSTKEMKEKAKQERQD" gene complement(879059..880435) /locus_tag="Acear_0812" /db_xref="GeneID:9512854" CDS complement(879059..880435) /locus_tag="Acear_0812" /note="InterPro IPR005490; KEGG: amt:Amet_2951 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: A6TSD3 Putative uncharacterized protein; PFAM: L,D-transpeptidase catalytic domain" /codon_start=1 /transl_table=11 /product="ErfK/YbiS/YcfS/YnhG family protein" /protein_id="YP_003827415.1" /db_xref="GI:302391595" /db_xref="GeneID:9512854" /translation="MNRKITYIFILLLVVALSGYAYFINMSPDEVPKQQTEDHAQEDR LTKTELENVEENINAFNIEDDFRITQNLSQEKNDVLALNSQKTTQVLKKINPKRKNTV LHQYDSRLPETINRALQYFSYDISYNYFLVTEENGAEIKENPDPATTTVVRVENLDKV SLLQRVDGEEVAGSNIWYRVAIEKDNQIYEGYLHSTTGLTRKFRFDKMQNAVNNLRQE VAEGALHYISNYKNQNGAPPQKGDSAVDEQGYRVYHSAPAYKEASTDANYRYAPDGML VRILNETDDFYYVNIPTFDGNFYIPKQYIDSTAKLNQLNHVLVVDNEQQNQAAFKLVE DGLNLVSYTLATTGKPGDFSFETSPGAYKVLEKKERFEYLKKGSEDIAGYAPFATRFS GGAYLHGVPVAYEEENGEKIDPGLIEYIHTIGTFPRSSMCVRNFTSHAKFIYNWMDVQ NGAVIVID" misc_feature complement(879065..879733) /locus_tag="Acear_0812" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: ErfK; COG1376" /db_xref="CDD:31566" misc_feature complement(879065..>879187) /locus_tag="Acear_0812" /note="L,D-transpeptidase catalytic domain; Region: YkuD; pfam03734" /db_xref="CDD:190732" gene complement(880614..881072) /locus_tag="Acear_0813" /pseudo /db_xref="GeneID:9512855" gene 881582..881905 /locus_tag="Acear_0814" /pseudo /db_xref="GeneID:9512856" gene 882094..883044 /locus_tag="Acear_0815" /db_xref="GeneID:9512857" CDS 882094..883044 /locus_tag="Acear_0815" /note="COGs: COG2378 transcriptional regulator protein; InterPro IPR018356:IPR001034; KEGG: nth:Nther_0815 helix-turn-helix type 11 domain protein; SPTR: B2A7V3 Helix-turn-helix type 11 domain protein; PFAM: HTH domain" /codon_start=1 /transl_table=11 /product="helix-turn-helix type 11 domain protein" /protein_id="YP_003827416.1" /db_xref="GI:302391596" /db_xref="GeneID:9512857" /translation="MKYDRLLRLTSLIDHIASAPGKNFQFYADKFGVAARTIRRDVDT LAEAGLPVETSAGIRFINDIELPNINFTYNEAFALMIALSELKRYTQFDGELEQVKVK LEEVFPDKLAEIAKEIEKRVGIYPSRTEIATEISDKMMPIISSLIDNRRLEIKYYSFS SDEVKWRKVDPYGVFFRRRSWYLAAYCHLADEVRTFRFSRVREWNHLREYFELPDDFN LDEYVTESWELMKGEPAEIEVKFASDVAQLILETEFNKDEEKELLKDGSVIYRVKVEG WREIFYWILSFGGDAEIIKPDWLRSKAEDEAKRMLKLYSS" misc_feature 882094..883041 /locus_tag="Acear_0815" /note="Predicted transcriptional regulator [Transcription]; Region: COG2378" /db_xref="CDD:32525" misc_feature <882175..882264 /locus_tag="Acear_0815" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene 883056..885812 /locus_tag="Acear_0816" /db_xref="GeneID:9512858" CDS 883056..885812 /locus_tag="Acear_0816" /note="KEGG: hau:Haur_2228 hypothetical protein; SPTR: A9AX60 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Csc3" /codon_start=1 /transl_table=11 /product="CRISPR-associated protein Csc3" /protein_id="YP_003827417.1" /db_xref="GI:302391597" /db_xref="GeneID:9512858" /translation="MSSILELVASEEDSFWNDYLQEVAFNGLTPYYKIQQWGNREGTT LGEHVLTGCMLIQELKDICNLTELEEKICLAAYTVHDMNKIERFANKNIPLKKATLED ILIELERVNLVKIFPEAKEYIDDITFLVRNHAGKFHAMEGLLAPNKRDFQLGQDRLEE LVELIKGVDVADLSDEFSEEYQKDKFLSKVNIIADKQYQLVNHRLSEHRGILTNLIHN AVNQYLQEEYNYTPVFVYPKGIYYLTDDPVKLTRNEFEKLAKQVEKEVNKIVRGKFAD FISSTSTGIKIDGKCLDLNVPFIDMLEVVDNRIHSKGYGSDRHTKVWKKVLENVDGLD QDTTEDYKEFFAALTDTPFVEEEFHTAELIRAYYNFLRLDHFNLNSAQAWNRTYELLD VDEEVQSYFELLSGLAAIYYRPYPLAKYLMDNEDLSYDKLYQLVKERGTEVVDELQDD ETDSLFKRYIYRVLSIDQQNFVDQEEFQANFDYYLDKPHKQCSTCGLDYEVDDWMAGD VPDNINVQFFSNRLAGGGGEPKRNICKICNKQFVLEKLNFVAHSQTDTFYLHFYPKGF HSAVFLNAFRHTLDKLRGEDNRAIMLKNDQIIIDQLDEKVDRDLQLKFSETNSNGNPL PRYSQVVGNIITLPLNCPGDNDTQRFIFALQQILIWMRYFNFRAILSRTPIPPLAHNE FDQLYLDNLPFNLKGVIGKQNLDHEEVEELWGDIKDFYNISSQVDEGTDRRKVYAKLF RTASDNLMELFFVLDRLIIQKADSEREELAISRRVLEKLESLISTKGGEEMESAEVIA KLGELAGKSYIKGKTFKRNSLLKPIDIIFDLLERKSEYLDLETVFATATQQIFDHIKR ISPDDRQPGETKYQKIEEFVATFKKDLLEGVYQGKINNLIADQKIIKSAYLFYYRKAT KTEE" misc_feature 883185..885788 /locus_tag="Acear_0816" /note="CRISPR/Cas system-associated protein Cas10d; Region: Cas10d_I-D; cd09712" /db_xref="CDD:187843" misc_feature 883221..885788 /locus_tag="Acear_0816" /note="CRISPR type I-D/CYANO-associated protein Csc3/Cas10d; Region: cas_Csc3; TIGR03174" /db_xref="CDD:132218" gene 885835..886782 /locus_tag="Acear_0817" /db_xref="GeneID:9512859" CDS 885835..886782 /locus_tag="Acear_0817" /note="InterPro IPR017574; KEGG: hau:Haur_2229 hypothetical protein; SPTR: A9AX61 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Csc2; TIGRFAM: CRISPR-associated protein Csc2" /codon_start=1 /transl_table=11 /product="CRISPR-associated protein Csc2" /protein_id="YP_003827418.1" /db_xref="GI:302391598" /db_xref="GeneID:9512859" /translation="MDLLDEYSDFLVDEYQNFPQSNYVNILLVRKTESETIFRTESEG GLSKEFVRITGQEEPTQRVVMTKRKQVAVERRTGRELLRRHDQLFENDGDICAMNRNT PCGECVDCMLYGFAVGSGGAQKARVITNDAYSLLPAKKVTAKRTFNALYDNGTMRDPE TGETSTSLGEVEYIKPETHFIDVQTLKDVTAEELIYVLGNILRSTRYGAISSKIGKME NYLVGIYFSDCELTSNLELTQQVNQELEEVEFPLETDKIKGLAKEKMDQSLESIFGQV KVLADEKLDQLLNEIREIYQSDEQIEELLETIVKKYPGN" misc_feature 885889..886695 /locus_tag="Acear_0817" /note="CRISPR/Cas system-associated protein Csc2; Region: Csc2_I-D; cl11869" /db_xref="CDD:187965" gene 886860..887564 /locus_tag="Acear_0818" /db_xref="GeneID:9512860" CDS 886860..887564 /locus_tag="Acear_0818" /note="InterPro IPR017576; KEGG: hau:Haur_2230 hypothetical protein; SPTR: A9AX62 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Csc1; TIGRFAM: CRISPR-associated protein Csc1" /codon_start=1 /transl_table=11 /product="CRISPR-associated protein Csc1" /protein_id="YP_003827419.1" /db_xref="GI:302391599" /db_xref="GeneID:9512860" /translation="MEQERKVYHVELELLENTFFASREIYNYYETEPLLGHFALAYAL GLCQGTYSQPKKPLYQEHFTDLNDKGIYLTPATVIGRPKFIIQNFNTLSDSYWYSFEN NAVESDRSKDRTSASNFPQQGRAKMLATGNQFSFYLFSRDELELPRYIRLGKFMSKAK VKQKKVNYELQEVEQKKIRRVLSPLDFGEKVEMHSYDTINIRPTPLIKNSILSGKMLY IKQSDEYLPADMSYGV" misc_feature 886893..887555 /locus_tag="Acear_0818" /note="CRISPR/Cas system-associated protein Csc1; Region: Csc1_I-D; cl11870" /db_xref="CDD:187966" gene 887568..889817 /locus_tag="Acear_0819" /db_xref="GeneID:9512861" CDS 887568..889817 /locus_tag="Acear_0819" /note="COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster; InterProIPR011545:IPR014021:IPR001650:IPR014001:IPR 017575; KEGG: hau:Haur_2231 helicase superfamily protein; PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; SPTR: A9AX63 Helicase superfamily 1 and 2 ATP-binding; TIGRFAM: CRISPR-associated helicase, Cyano-type; PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase, Cyano-type" /codon_start=1 /transl_table=11 /product="CRISPR-associated helicase, Cas3 family" /protein_id="YP_003827420.1" /db_xref="GI:302391600" /db_xref="GeneID:9512861" /translation="MIEISLSEDYEPVSKENPFNLEYTPLKHQYQTYRALQDNQIVMN LHNTGTGKTLASLLYLFDLQEIGGNVLFIAPTNELIHQHARDIKGFITENDLKFNVIN VDAGLLEQLTSQARRNGDKLHRLLSNPLEFAKELDLEFTDRSYPFVFVTNPDIFYYAL YFQYNRIDRRNLCQDFAALFSYIVIDEFHYYNSKQFANFLFFFALSKGFGYFAEDRRI CLLSATPAQYVINYLEELDLKMEIIDLEGDQEKKLQTLTKAKAEIVAGDLDEEIDLVE DKITDYLHQGLEGVIIGNSLSRINRAFAQIEWPDKERITGPQSRRARQEANKKQLILA TPTVDIGYNFDKENKNRQNIDFAVVEAKSVDELLQRIGRAGRVLGKEIQNQPSKLLIL VDDNSYSVLADELEKNKEYGRKEFAKLLVKLNTPPQKKEFVQYINSYALLESFYPLYE MYCAMPDEIKDYIEELFNLLQEIFSGTKSFRKLLAIMSKFKHHERVCEGEEELSLQDC QDFSYWFDNRTYPDDVIEEYAENSGFQKSVMDFIRQEYAVKKSLFNFRDSFNGPRAVV YDPQDILASDEVTSYDLLHVIRNYKYDLYSSRQQFKEATGSDLKGDFYLQVRDFRSEK MRLSYRLKSPYGLDKQSFEEKLCNRPLALSGLELVSDSALKSEITNYFKEEYIPMLIM TNNLTSNLYGAVKNSAIYPVKIEMIFPDYDSEEYYVILGTAAFLVYPELRGAIYAAEN QKEEPEIII" misc_feature 887649..888692 /locus_tag="Acear_0819" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cl14882" /db_xref="CDD:197446" misc_feature 887649..888692 /locus_tag="Acear_0819" /note="CRISPR-associated helicase Cas3, subtype CYANO; Region: cas3_cyano; TIGR03158" /db_xref="CDD:163164" gene 889831..890424 /locus_tag="Acear_0820" /db_xref="GeneID:9512862" CDS 889831..890424 /locus_tag="Acear_0820" /note="COGs: COG1468 RecB family exonuclease; InterPro IPR013343; KEGG: npu:Npun_R2693 CRISPR-associated Cas4 family protein; PFAM: CRISPR-associated protein Cas4; SPTR: B2ITJ9 CRISPR-associated protein Cas4; TIGRFAM: CRISPR-associated protein Cas4; PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4" /codon_start=1 /transl_table=11 /product="CRISPR-associated protein Cas4" /protein_id="YP_003827421.1" /db_xref="GI:302391601" /db_xref="GeneID:9512862" /translation="MDQKLYVPLSAINAYNYCPYRVYLEYVLGEWKDNTHTIEGILKH DRAHSGERRYDSNRIQTTQVFVKSEQYRLVGKIDVVEEKEGEVYPVEYKKGRSGEWIN DHLQLCAQALCLEEQLGVKITKGYLWYFSSRDREEVEFDLKLRDKTIETGESVLKIME GEVIPENEYSRRCRACSIEEICLPKEVSILKKGGIDY" misc_feature 889849..890379 /locus_tag="Acear_0820" /note="CRISPR/Cas system-associated protein Cas4; Region: Cas4_I-A_I-B_I-C_I-D_II-B; cd09637" /db_xref="CDD:187768" gene 890424..891419 /locus_tag="Acear_0821" /db_xref="GeneID:9512863" CDS 890424..891419 /locus_tag="Acear_0821" /note="COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729; KEGG: drm:Dred_1625 CRISPR-associated Cas1 family protein; PFAM: protein of unknown function DUF48; SPTR: A4J500 CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1" /codon_start=1 /transl_table=11 /product="CRISPR-associated protein Cas1" /protein_id="YP_003827422.1" /db_xref="GI:302391602" /db_xref="GeneID:9512863" /translation="MPTVYVTQEDTALRKKGERLIVKQGKEKIADVPLVKVDQVVVFG NASISGSLISLLLKAEVPIAYLSYYGKYKGRLVPEYSKNSLLRLKQFEAHKDMKVKLE LTRKIVKGKLTNMRTLLMRDTRETRSEEVKQLCQKMKNIINKIERTESIDKLRGFEGM GSRYYFSQFNEVLNDSFNFNGRNRRPPKDPVNCLLSFGYSLLLNDVLAALYLVGFDPY IGFFHSSQYGKPALALDLMEEFRPVIVDSVVKSVINKKMIVSDNFNKTCGTVKMKDKA RNKFLEQYEKRLREEFTHPVFEYKVTWRRCIELQARLISKTINEEIEEYPPLVVK" misc_feature 890430..891383 /locus_tag="Acear_0821" /note="CRISPR/Cas system-associated protein Cas1; Region: Cas1_I-II-III; cd09634" /db_xref="CDD:187766" gene 891420..891692 /locus_tag="Acear_0822" /db_xref="GeneID:9512864" CDS 891420..891692 /locus_tag="Acear_0822" /note="COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR003799; KEGG: cyh:Cyan8802_4556 CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; SPTR: A0YW88 Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated protein Cas2" /codon_start=1 /transl_table=11 /product="CRISPR-associated protein, Cas2 family" /protein_id="YP_003827423.1" /db_xref="GI:302391603" /db_xref="GeneID:9512864" /translation="MFVVISYDISEDKRRNRIFKILKDFGTWIQYSVFECELEKKDYL KLRDRLQKVLDEDEDNIRFYFLCSKCEDEIERIGSESSPAQQSIII" misc_feature 891426..891659 /locus_tag="Acear_0822" /note="CRISPR/Cas system-associated protein Cas2; Region: Cas2_I_II_III; cd09725" /db_xref="CDD:187856" gene 891732..892526 /locus_tag="Acear_0823" /db_xref="GeneID:9512865" CDS 891732..892526 /locus_tag="Acear_0823" /note="InterPro IPR019267:IPR010156; KEGG: drm:Dred_1632 CRISPR-associated Cas family protein; PFAM: protein of unknown function DUF2276; SPTR: A4J507 CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein Cas6; PFAM: Uncharacterized conserved protein (DUF2276); TIGRFAM: CRISPR-associated protein Cas6" /codon_start=1 /transl_table=11 /product="CRISPR-associated protein Cas6" /protein_id="YP_003827424.1" /db_xref="GI:302391604" /db_xref="GeneID:9512865" /translation="MFYSVIVRFRAKKDIYFNYYPGESLHGMLFHMINKRDEEKVTVL HDRYNSKPFTISPILPYLKWRKGKRYLKKGKKYFFRITFLEEEWYKLFMEYFLYHPEG LKLNGVKIEVIEALTNSKQDNRCDCIEPSQLRQNSGDDRKIKFKFHSTTTFSIEDRHI IFPRADYLFNSLFSKWQEFGSEKLTVEREDFDNIYLSRYDLESTMEWFNDYPIKGFEG KCKYELSSKISSKKVKDINLLAGFAFYGGVGYKTTMGLGQVARMQN" misc_feature 891882..892508 /locus_tag="Acear_0823" /note="CRISPR/Cas system-associated RAMP superfamily protein Cas6; Region: Cas6-I-III; cd09652" /db_xref="CDD:187783" repeat_region 892812..893288 /note="CRISPR" gene 893453..894036 /locus_tag="Acear_0824" /pseudo /db_xref="GeneID:9512866" gene complement(894158..894538) /locus_tag="Acear_0825" /db_xref="GeneID:9512867" CDS complement(894158..894538) /locus_tag="Acear_0825" /note="InterPro IPR012544; KEGG: cbf:CLI_1474 hypothetical protein; PFAM: protein of unknown function DUF1696; SPTR: C5RKM1 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1696)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827425.1" /db_xref="GI:302391605" /db_xref="GeneID:9512867" /translation="MGLFSGLMGNASEMDMEKLEKELAEILIKGEEIEQGYQLIRDYF VFTNKRLILVDKQGLTGAKKELHSIPYSSIRHFSIETARSFDRDSELKIWIASLQQPV IKEFSKKSSDILEVQKTLSKHALK" misc_feature complement(894164..894535) /locus_tag="Acear_0825" /note="Protein of unknown function (DUF1696); Region: DUF1696; pfam08000" /db_xref="CDD:149210" gene 894751..894939 /locus_tag="Acear_0826" /db_xref="GeneID:9512868" CDS 894751..894939 /locus_tag="Acear_0826" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827426.1" /db_xref="GI:302391606" /db_xref="GeneID:9512868" /translation="MKWIIGFLAVLGISVWAFVSFLKSNLKEKKEVEVISDNQTDQSD DNMEVVREKMMNGIEEDK" gene complement(894977..895903) /locus_tag="Acear_0827" /db_xref="GeneID:9512869" CDS complement(894977..895903) /locus_tag="Acear_0827" /note="COGs: COG0679 permease; InterPro IPR005479:IPR004776; KEGG: hor:Hore_02940 auxin efflux carrier; PFAM: auxin efflux carrier; SPTR: B8D1H8 auxin efflux carrier; PFAM: Membrane transport protein" /codon_start=1 /transl_table=11 /product="auxin efflux carrier" /protein_id="YP_003827427.1" /db_xref="GI:302391607" /db_xref="GeneID:9512869" /translation="MQFSIIINQILVLFIIIFIGYIIRKKEIINQEVSDGLTDLLMEV TLPALIISSMIIEINPRLVNNLQISFWVWGGLYLFIIGMISLLSHYLPFSQNQKSVFK FATIFGNVGYMGYPVIDAIYPEYGMLYAIIGNIFFNVLAWTYGIYLFTKKEDGDNKIQ FEKLLNNGLIAIIIGFGFLLTGYQLPNPLTGALDRLGNMTFPLSMIVIGSSLTNIDFK TILYNKYLYLISGLKLIIIPLIIFLLLQPFTIPTKINNIVVILFAMPSAATTVVFAEK FGADYTLASEGVFVTTLFSLVTIPFFIYLITL" misc_feature complement(894983..895816) /locus_tag="Acear_0827" /note="Membrane transport protein; Region: Mem_trans; cl09117" /db_xref="CDD:189190" gene 896198..898438 /locus_tag="Acear_0828" /db_xref="GeneID:9512870" CDS 896198..898438 /locus_tag="Acear_0828" /note="COGs: COG0366 Glycosidase; InterProIPR006046:IPR013783:IPR013781:IPR004193:IPR 004185:IPR006047:IPR006589:IPR017853:IPR014756; KEGG: mta:Moth_1856 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; SPTR: C6PDY5 Alpha amylase; PFAM: Alpha amylase, N-terminal ig-like domain; carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain" /codon_start=1 /transl_table=11 /product="alpha amylase catalytic region" /protein_id="YP_003827428.1" /db_xref="GI:302391608" /db_xref="GeneID:9512870" /translation="MAESFEVTFTYKPVISVDSVNLIGDFNDWDLDRTPMADENGDGT YEVTLELEAGEYQYKFVVDDDKWQKPPEADYYVDDGFGEKNGVIIVGDEVPLRVSVKG NGVIDFETLRHNNSDVKFANPLSRDRISIRFQTRRNDVEEVTLCYNDGQKQRIQLENF ATYEEFDFYKAIIDLENPYFEYYFEVKDGDKIIWYDKEGIKEADNGKLTDLTSFQYNL SEVDIFRTPGWVKDAIFYQIFPDRFYNGCKENDPEKIEVYKDEDTRCDAVIPDWEKGV PPNPPVLTEETEFYDNKNEIHPEAGYYVFYGGDLQGVEQKIPYLKRLGVNAVYLNPIF KGTANHRYNTAGYELVDDTLAIKGDLEASEEYVIKLIEKLHRYGFKVIFDAVFNHTGY EHWAFQDIIEHGKDSKYVDWYNIHSFPIVPLYKQNKENPPNYDCWWGFGHLPELNVKN PEVRDYIFQVTEKWMDPKGNGDLSAGIDGWRLDVPNEVKEVVPNFWQDWRESVMEINP EAYIVGEIWDNASDYLQGDEFDGVMNYRFRDAALRFLGLNEIKGDEFAAELSKMYFQY PEQANYSMLNLIDSHDTSRYLTVIDEDKERMKLTVLFQMTYLGAPMVYYGDEIGMKGE DGPDCRRTMIWKDRGYTKPDYDLFNHYQRLIKIRKQQPALRRGNIRGIDIAYDQVDGF KRSYGDQQLLVLLNAGKEMIDLEVEVDAADGKYRELYQNRIVSVDNGRLHLKLEGITG AIIKLS" misc_feature 896216..896464 /locus_tag="Acear_0828" /note="E or 'early' set of sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end; Region: E_set; cl09101" /db_xref="CDD:195789" misc_feature 896534..>896797 /locus_tag="Acear_0828" /note="CD and pullulan-degrading enzymes N-terminus domain. Members of this subgroup include: Cyclomaltodextrinase (CDase), maltogenic amylase, and neopullulanase all of which are capable of hydrolyzing all or two of the following three types of substrates:...; Region: CD_pullulan_degrading_enzymes_N_term; cd02857" /db_xref="CDD:30344" misc_feature 896567..898297 /locus_tag="Acear_0828" /note="maltodextrin glucosidase; Provisional; Region: PRK10785" /db_xref="CDD:182728" misc_feature order(896732..896734,896738..896740) /locus_tag="Acear_0828" /note="homodimer; other site" /db_xref="CDD:30344" misc_feature 897119..898078 /locus_tag="Acear_0828" /note="Alpha amylase, catalytic domain; Region: Alpha-amylase; cl07893" /db_xref="CDD:164103" gene 898453..899940 /locus_tag="Acear_0829" /db_xref="GeneID:9512871" CDS 898453..899940 /locus_tag="Acear_0829" /EC_number="2.4.1.25" /note="COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR013781:IPR003385:IPR017853; KEGG: lba:Lebu_1529 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: C7NB71 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase" /codon_start=1 /transl_table=11 /product="4-alpha-glucanotransferase" /protein_id="YP_003827429.1" /db_xref="GI:302391609" /db_xref="GeneID:9512871" /translation="MEFKRQSGILLHPTSLPGDYGIGSLGEEAYEFIDFLVAADQKLW QILPLGPTGYGDSPYQSFSAFAGNPLLISLERLKEDGLLAADDLKTEKEFALDYVDYD QVTEFKYPLFEKAFQTFKRDAAKSIEDKFQRFCCENSDWLDDYALFKTLKECFEGQPW YEWDEDIKLRRSEAINHYQETLQDRIKFHKFIQYIFFKQWNRLKAYANENYIKIVGDI PIFVAYDSADVWANPELFSLDEDKKPINVAGVPPDYFSETGQLWGNPLYDWQKLKETD YDWWIDRFETTLELVDIVRLDHFRGFAAYWAVPYGEKTAVRGKWKEGPGRDFFRKVKD ELKKLPIIAEDLGVITDEVEELRDYFKLPGMNVLQFGFNSQDDNNHLPHNYTKNSVVY TGTHDNNTVLGWYNNADDEAREYAIEYLKASEDNICWDFLQAAWASVSKIAIAPLQDI LSLNSEARMNTPGTTKGNWKWRYRKEMLDVNLSKKLKRLTGIYHR" misc_feature 898453..899937 /locus_tag="Acear_0829" /note="4-alpha-glucanotransferase; Region: Glyco_hydro_77; cl00711" /db_xref="CDD:186157" gene 900353..900970 /locus_tag="Acear_0830" /db_xref="GeneID:9512872" CDS 900353..900970 /locus_tag="Acear_0830" /EC_number="5.4.1.2" /note="COGs: COG2082 Precorrin isomerase; InterPro IPR003722; KEGG: cby:CLM_1073 precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase CbiC/CobH; PRIAM: Precorrin-8X methylmutase; SPTR: C1FVC4 Precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase" /codon_start=1 /transl_table=11 /product="precorrin-8X methylmutase" /protein_id="YP_003827430.1" /db_xref="GI:302391610" /db_xref="GeneID:9512872" /translation="MEIIQNPEAIEDKSMNIIEEEVADLECSDQEKKIVKRVIHATAD FDFKDLIIISEDAVEAGLQALESGSNIVTDVNMLRAGINDRKLGSFGGELKCFISNDD VAKEAKEKGITRSMMSMRRAAKNPDNKIFAIGNAPTALFELMKLIKAGKADPELIIGT PVGFVGAKESKAELEKMDLPFITVRGRKGGSSVAASITNALLYMK" misc_feature 900353..900964 /locus_tag="Acear_0830" /note="Precorrin isomerase [Coenzyme metabolism]; Region: CobH; cl00913" /db_xref="CDD:197416" misc_feature 900377..900964 /locus_tag="Acear_0830" /note="Precorrin-8X methylmutase; Region: CbiC; pfam02570" /db_xref="CDD:145615" gene 900996..902126 /locus_tag="Acear_0831" /db_xref="GeneID:9512873" CDS 900996..902126 /locus_tag="Acear_0831" /note="COGs: COG1903 Cobalamin biosynthesis protein CbiD; InterPro IPR002748; KEGG: amt:Amet_0070 cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; SPTR: A6TJE5 Putative cobalt-precorrin-6A synthase [deacetylating]; TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein CbiD" /protein_id="YP_003827431.1" /db_xref="GI:302391611" /db_xref="GeneID:9512873" /translation="MFESYVKRNGEKLRRGYTTGTAAAGAAKAAAETLYSGQTLDVVK VDTPAEIVVDLEISGTEIKEESVSCTVLKDGGDDADITDGTEIVAEVTKLDSGIELKG GKGVGEVTKPGLAVEVGKPAINPVPREMIIDSVKEVLPPESGAKITIKVPEGEELAAN TLNPRLGVEGGISILGTTGIVEPMSKKAYRESLVVTLDQALAEDNYELVFIFGNYGKQ MAQSMGVSDNQWVKMSNFVGYMLERAAEREIERIILLGHVGKLIKVGAGIFDTHSSVA DARLEIVAAYTASLGGSQQLIQKILAANTAEETIQILREVELAEDVFNLLAKRVVARA AEKVEYEIDFGAILFSMDQEVVGSYGVELKKGAEEWRIKSMC" misc_feature 901008..902090 /locus_tag="Acear_0831" /note="CbiD; Region: CbiD; cl00828" /db_xref="CDD:186211" gene 902102..902728 /locus_tag="Acear_0832" /db_xref="GeneID:9512874" CDS 902102..902728 /locus_tag="Acear_0832" /note="COGs: COG2241 Precorrin-6B methylase 1; InterPro IPR014777:IPR000878:IPR012818; KEGG: lba:Lebu_0508 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: C7NEQ8 Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit" /codon_start=1 /transl_table=11 /product="precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit" /protein_id="YP_003827432.1" /db_xref="GI:302391612" /db_xref="GeneID:9512874" /translation="MENQIYVLGIGPGSKEYMLPVVERLASESDVLIGGRRALELFSQ LDKEELVIKADLERILNYIQDNYQQKQIAVLVSGDPGLYSMLNYLSKHFSKDQLKVIP GISSLQLGFAEAKLVWQDAEITSLHGRERSELLELVQKEDKVGFFTDHKFPPDEIAQY LLDNGVQDRKAFVGERLSYEDERIIDGDLEEIADSDNFDMSVMVVYSE" misc_feature 902114..902725 /locus_tag="Acear_0832" /note="Tetrapyrrole (Corrin/Porphyrin) Methylases; Region: TP_methylase; cl00304" /db_xref="CDD:197405" gene 902721..903311 /locus_tag="Acear_0833" /db_xref="GeneID:9512875" CDS 902721..903311 /locus_tag="Acear_0833" /note="COGs: COG2242 Precorrin-6B methylase 2; InterPro IPR014008; KEGG: dae:Dtox_1292 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; SPTR: C6Q7R1 Precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Met-10+ like-protein; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit" /codon_start=1 /transl_table=11 /product="precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit" /protein_id="YP_003827433.1" /db_xref="GI:302391613" /db_xref="GeneID:9512875" /translation="MSKWRFQTPGIPDDLFIRGDLPMTKEEVRAVTISKLRLKRDSVV WDIGAGTGSLSIEAGLIADQGSVWAVERESEGIELINQNCEEFGVENIEPINGEAPAA LADLPAADRIIIGGSGGQLEEILAMVDKKMTAEGRVVLNAITLETLLAAKESLSKMDY SFNIVTVSITRTREIGNYHMLDAQNPIYIIAGERRR" misc_feature 902730..903302 /locus_tag="Acear_0833" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" misc_feature 902742..903305 /locus_tag="Acear_0833" /note="Precorrin-6B methylase 2 [Coenzyme metabolism]; Region: CobL; COG2242" /db_xref="CDD:32423" gene 903313..904026 /locus_tag="Acear_0834" /db_xref="GeneID:9512876" CDS 903313..904026 /locus_tag="Acear_0834" /EC_number="2.1.1.151" /note="COGs: COG2243 Precorrin-2 methylase; InterPro IPR012382:IPR014777:IPR000878:IPR006364; KEGG: dae:Dtox_1293 precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PRIAM: Cobalt-factor II C(20)-methyltransferase; SPTR: C1TH33 Precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: precorrin-2 C20-methyltransferase" /codon_start=1 /transl_table=11 /product="precorrin-2 C20-methyltransferase" /protein_id="YP_003827434.1" /db_xref="GI:302391614" /db_xref="GeneID:9512876" /translation="MAGKFYGVGVGPGDPELMTLKAKRILDQADIICTPKSKAGKDSI ALSIVKEVVSTEGKIKDLVFPMTHDQERLDKFWNEAVDEIQAELESGQNVAFITLGDP LLYSTYIYVLERLQNRPMEVEIETVPGINSFSACAAAMNQPLAEKNETLSIIPAAYDY DDLEEILATFDNTVLMKVARNFDEVVAKLEKLEMKESSFYASKCGRSEELLTRDLDSL LGDELDYLSLVIAKQRGEE" misc_feature 903319..904011 /locus_tag="Acear_0834" /note="Tetrapyrrole (Corrin/Porphyrin) Methylases; Region: TP_methylase; cl00304" /db_xref="CDD:197405" gene 904031..904795 /locus_tag="Acear_0835" /db_xref="GeneID:9512877" CDS 904031..904795 /locus_tag="Acear_0835" /EC_number="2.1.1.133" /note="COGs: COG2875 Precorrin-4 methylase; InterProIPR003043:IPR014777:IPR014776:IPR000878:IPR 006362; KEGG: amt:Amet_0074 precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PRIAM: Precorrin-4 C(11)-methyltransferase; SPTR: A6TJE9 Precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: precorrin-4 C11-methyltransferase" /codon_start=1 /transl_table=11 /product="precorrin-4 C11-methyltransferase" /protein_id="YP_003827435.1" /db_xref="GI:302391615" /db_xref="GeneID:9512877" /translation="MKVYFVGAGPGDPELITVKGQKIIKKADVIIYAGSLVNPDVLDV AKDEAEIHNSASMTLEEVLEVMETAVAENKLVARVHTGDPSLYGAIQEQIDELVEMEV DFEVIPGVSSFLATAASLKREYTLPDVSQTMILTRLEGRTSVPDKEKLHKLARHNASM AIFLSVHMIGDVVKELAEEYPVETPIAVVQKASWPDEKKVIGTLETITEKVEEAEIDK TAMIVVGDFLDTEYSRSKLYDKDFSHEYRTSNTGSQ" misc_feature 904031..904774 /locus_tag="Acear_0835" /note="Tetrapyrrole (Corrin/Porphyrin) Methylases; Region: TP_methylase; cl00304" /db_xref="CDD:197405" gene 904799..905860 /locus_tag="Acear_0836" /db_xref="GeneID:9512878" CDS 904799..905860 /locus_tag="Acear_0836" /note="COGs: COG2073 Cobalamin biosynthesis protein CbiG; InterPro IPR002750; KEGG: drm:Dred_2710 cobalamin (vitamin B12) biosynthesis CbiG protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; SPTR: A1HPX3 Cobalamin (vitamin B12) biosynthesis CbiG protein; PFAM: Cobalamin biosynthesis central region; Cobalamin synthesis G C-terminus; Cobalamin synthesis G N-terminal" /codon_start=1 /transl_table=11 /product="cobalamin (vitamin B12) biosynthesis CbiG protein" /protein_id="YP_003827436.1" /db_xref="GI:302391616" /db_xref="GeneID:9512878" /translation="MNLAVIAITDNGIKTAFRIAEEMEAGLDIYLPDKFKESTETEQV NFYTGRLKELVSRIFTEYDGLIFVMALGIVIRVTADFLTDKRRDPAVVTVDETEEFVI STLSGHLGGANELTVQLASSLGAAPVITTATDRQGKLAIDMLAKELDCRIDPFSNLKH INAAIVNDKEINIFTDYELDLGSDKNLNFYSLNELDQVNSAPTVVISNQPVKLPENLA QKPYLYLRPRNLTVGIGCRRGVSKERIAAAVDKALAEIDSDLNQVKSLATIDLKSDEA GLVEYAEDKDLELKIISRDKIKNADLEFTTSEFVKQTIGVGGVCEPAALLSGKKMELL LKKTKLDGVTVAVAEERFM" misc_feature 904799..905851 /locus_tag="Acear_0836" /note="cobalamin biosynthesis protein CbiG; Validated; Region: PRK05788" /db_xref="CDD:180260" misc_feature 904949..905200 /locus_tag="Acear_0836" /note="Cobalamin synthesis G N-terminal; Region: CbiG_N; pfam11760" /db_xref="CDD:152196" misc_feature 905210..905479 /locus_tag="Acear_0836" /note="Cobalamin biosynthesis central region; Region: CbiG_mid; pfam11761" /db_xref="CDD:192823" misc_feature 905483..905845 /locus_tag="Acear_0836" /note="Cobalamin synthesis G C-terminus; Region: CbiG_C; cl12133" /db_xref="CDD:196350" gene 905755..906576 /locus_tag="Acear_0837" /db_xref="GeneID:9512879" CDS 905755..906576 /locus_tag="Acear_0837" /EC_number="2.1.1.131" /note="COGs: COG1010 Precorrin-3B methylase; InterPro IPR014777:IPR000878:IPR006363; KEGG: dps:DP0224 precorrin-3B C17-methyltransferase (CobJ); PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Q6ARS2 Probable precorrin-3B C17-methyltransferase (CobJ); TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: precorrin-3B C17-methyltransferase" /codon_start=1 /transl_table=11 /product="precorrin-3 methyltransferase" /protein_id="YP_003827437.1" /db_xref="GI:302391617" /db_xref="GeneID:9512879" /translation="MRTSSIIEWQEDGITLKEDETGRSDSSSSRGEVYVVGIGPGDLE HLSIKAFQIIKDVDVVAGYNTYIDLVDELISKEQEVISTGMTKEIDRVEMALEAAQKG NRVAIVSSGDAGVYGMAGLVLETVDKKDLELEVEIIPGITAANAAASTLGAPLMHDYA VISLSDLLTPWKVIVDRLKRAAGGDFVVVLYNPKSKQRQQQIVKAREIFLQHKEPATP VGIVRSAKRGSEEMVITDLENMLDEEIGMVTTVIIGNSETFSFADSMVTPRGYEV" misc_feature 905851..906570 /locus_tag="Acear_0837" /note="Tetrapyrrole (Corrin/Porphyrin) Methylases; Region: TP_methylase; cl00304" /db_xref="CDD:197405" gene 906573..907331 /locus_tag="Acear_0838" /db_xref="GeneID:9512880" CDS 906573..907331 /locus_tag="Acear_0838" /note="COGs: COG2099 Precorrin-6x reductase; InterPro IPR003723; KEGG: dae:Dtox_1297 precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; SPTR: C6PHW4 Precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase" /codon_start=1 /transl_table=11 /product="precorrin-6x reductase" /protein_id="YP_003827438.1" /db_xref="GI:302391618" /db_xref="GeneID:9512880" /translation="MIYLIGGTKDSRQLTKKLLEAGYEVVVSVATEYGEKLVNEIEGV EVIADRLDQSGMEEVIEEYNVDRVIDATHPFAALVSQTAIKAAASKGKEYLRFERPPI ELPESELIIEKAGFEAALDYLKGTTGRILLTIGSKELDRFVTVIPDFNQRVVARVLPT AGVLQKCQQELGIPPANLIAIQGPFSQKLNQQLLIDYGIDLLVTKASGKTGGLDTKLQ AALDLKLPVLVIRRPEIDYPQLVTNMEELVDQLN" misc_feature 906573..907328 /locus_tag="Acear_0838" /note="Precorrin-6x reductase [Coenzyme metabolism]; Region: CobK; COG2099" /db_xref="CDD:32282" misc_feature 906576..907328 /locus_tag="Acear_0838" /note="Precorrin-6x reductase CbiJ/CobK; Region: CbiJ; cl00922" /db_xref="CDD:186262" gene 907350..907973 /locus_tag="Acear_0839" /db_xref="GeneID:9512881" CDS 907350..907973 /locus_tag="Acear_0839" /EC_number="2.7.7.62" /note="COGs: COG2087 adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; InterPro IPR003203; KEGG: drm:Dred_1910 adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; PRIAM: adenosylcobinamide-phosphate guanylyltransferase; SPTR: A4J5S8 adenosylcobinamide kinase; PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase" /codon_start=1 /transl_table=11 /product="adenosylcobinamide-phosphateguanylyltransferase" /protein_id="YP_003827439.1" /db_xref="GI:302391619" /db_xref="GeneID:9512881" /translation="MTDEFKKVLILGGARSGKSSFAEDMAYTLGRKDVTYIATAKPDD EEMQERIKHHKEQRPDSWRTVEEPEKVAERIPKLAGEAEVILLDCLTVLVSNLLLQGE ELGTEDYHFKEGEQKSQETLAELEKLATAIEEAEANIIVVSNEVGQGLVPPYPLSRIY RDTVGRANQLLAQAVTEVYISYAGLPVEIKELGERTREKFGGYNNDC" misc_feature 907371..907916 /locus_tag="Acear_0839" /note="Adenosylcobinamide kinase / adenosylcobinamide phosphate guanyltransferase (CobU). CobU is bifunctional cobalbumin biosynthesis enzymes which display adenosylcobinamide kinase and adenosylcobinamide phosphate guanyltransferase activity. This enzyme is...; Region: CobU; cd00544" /db_xref="CDD:29982" misc_feature order(907386..907394,907398..907400,907782..907793, 907797..907799,907830..907832,907842..907847, 907851..907856,907863..907865,907896..907898, 907902..907904) /locus_tag="Acear_0839" /note="homotrimer interface [polypeptide binding]; other site" /db_xref="CDD:29982" misc_feature 907386..907406 /locus_tag="Acear_0839" /note="Walker A motif; other site" /db_xref="CDD:29982" misc_feature order(907392..907406,907467..907469,907512..907514, 907521..907523,907545..907547,907611..907616) /locus_tag="Acear_0839" /note="GTP binding site [chemical binding]; other site" /db_xref="CDD:29982" misc_feature 907599..907613 /locus_tag="Acear_0839" /note="Walker B motif; other site" /db_xref="CDD:29982" gene 907963..909480 /locus_tag="Acear_0840" /db_xref="GeneID:9512882" CDS 907963..909480 /locus_tag="Acear_0840" /EC_number="6.3.5.10" /note="COGs: COG1492 Cobyric acid synthase; InterPro IPR002586:IPR011698:IPR017929:IPR004459; KEGG: dae:Dtox_3093 cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid ac-diamide synthase; SPTR: C1TIH4 adenosylcobyric acid synthase (glutamine-hydrolysing); TIGRFAM: cobyric acid synthase CobQ; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ" /codon_start=1 /transl_table=11 /product="adenosylcobyric acid synthase (glutamine-hydrolysing)" /protein_id="YP_003827440.1" /db_xref="GI:302391620" /db_xref="GeneID:9512882" /translation="MTAKTIMLQGTASNVGKSILTTALCRIFAEDGYQTTPFKGWNMA LNSYVTKDGGEIGIAQAIQAQAAGIDITVDMQPFLLKPKGKGESQVIKHGRPMADLGL KEQDSQYRQFALQEIEQSLDRLCEEFEMVVMEGAGSPAEINIKERDLANMNVAKLKET PVLLVADVDRGGALASVVGTIELLPPEEKELVAGIILNKFRGDRELLEPGIETVEEET GIPVVGVIPYFQGFRIPAEDSVALTDLQDEDVEVEIAVIKLPHISNFTDLEPFEQEPK TGVRYITQRDQLGNPDLIIIPGSKNTIDDLLYLQETGLAAEIEQAAEKSVPVIGVCGG YQMLGQKVYDPEGTESNWQELDGLGLLPIETTFSPNKLTFQAEAVVKGSGEFFADLTG SEVAGYEIHMGTSQLISDNSPAFRIKKRGQEEVNIADGAVSQDGLVFGTYLHGIFAND NFRRNLINRLRERKGLERLKADTVSHQVKLEESYEQLAAIVRDNLDLDQIYRIME" misc_feature 907966..909474 /locus_tag="Acear_0840" /note="cobyric acid synthase; Provisional; Region: PRK00784" /db_xref="CDD:179125" misc_feature 907978..>908094 /locus_tag="Acear_0840" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" misc_feature <908329..908643 /locus_tag="Acear_0840" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" misc_feature 908722..909333 /locus_tag="Acear_0840" /note="Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ); Region: GATase1_CobQ; cd01750" /db_xref="CDD:153221" misc_feature order(908956..908958,909163..909165,909169..909171) /locus_tag="Acear_0840" /note="catalytic triad [active]" /db_xref="CDD:153221" gene 909507..911027 /locus_tag="Acear_0841" /db_xref="GeneID:9512883" CDS 909507..911027 /locus_tag="Acear_0841" /EC_number="6.3.5.10" /note="COGs: COG1492 Cobyric acid synthase; InterPro IPR002586:IPR011698:IPR017929:IPR004459; KEGG: dae:Dtox_3093 cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid ac-diamide synthase; SPTR: A1HPW5 Cobyric acid synthase CobQ; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ" /codon_start=1 /transl_table=11 /product="adenosylcobyric acid synthase (glutamine-hydrolysing)" /protein_id="YP_003827441.1" /db_xref="GI:302391621" /db_xref="GeneID:9512883" /translation="MTAKTLMFQGTGSDVGKSVMTAAFCRILAQDGYHVAPFKSQNMA LNSYVTKEGGEIGRAQAVQAEAAQVEATVDMNPILLKPKEDTTSQVIIHGRPHRNMGA QEYFNHREEGLSYIQESLNRLKEDYQGVVLEGAGSPAEVNLREYDLVNMKAAELAQAP VILVASIERGGVFASIVGTFKLLNESELERIKGIIINKFRGDVSRLKPGLEFIEEYTG VPVLGVIPYFTDFKIPEEDSLPADRLEGSQYGDIEIAILYLPHISNFTDFAPLEDEAD VKVRYIKDGEQLGEPDAVIIPGSKNTIEDLEYLQEVGYVDQIQELAEKGTMVVGICGG YQMLGTKITDPHRMETDGKEIAGLELLKVETTFNPEKVTKQVTGEIINNQNLFSSLAD RSIAGYEIHMGESRLGKGVEPLIEVSAEDEKKTRLDGAVSEDGLVFGTYLHGIFDNDT FRRSFINYLRQQKGLPKLDCSAEVSTAEKREKAYEQLAEIVRENVDLEQVYQILNL" misc_feature 909510..911018 /locus_tag="Acear_0841" /note="cobyric acid synthase; Provisional; Region: PRK00784" /db_xref="CDD:179125" misc_feature 909525..>909665 /locus_tag="Acear_0841" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" misc_feature <909879..910184 /locus_tag="Acear_0841" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" misc_feature 910266..910874 /locus_tag="Acear_0841" /note="Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ); Region: GATase1_CobQ; cd01750" /db_xref="CDD:153221" misc_feature order(910500..910502,910707..910709,910713..910715) /locus_tag="Acear_0841" /note="catalytic triad [active]" /db_xref="CDD:153221" gene 911057..912010 /locus_tag="Acear_0842" /db_xref="GeneID:9512884" CDS 911057..912010 /locus_tag="Acear_0842" /note="COGs: COG1270 Cobalamin biosynthesis protein CobD/CbiB; InterPro IPR004485; KEGG: dae:Dtox_3092 cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; SPTR: C1TIH3 adenosylcobinamide-phosphate synthase; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein CobD" /protein_id="YP_003827442.1" /db_xref="GI:302391622" /db_xref="GeneID:9512884" /translation="MFEQISIIVIAAVILDLVIGEIDRITHPVVIIGNFIDWGEERLR QLAGSSLAEKAAGLILAVVTIGLTWSITYFLVMAAVKVNIILGLIIKVLLISITLSIS GLAEAAKGIYQPLVNDDLDQARQKLDWIVGRDTDELAENEIVRATVETVAENTVDGIL SPLFYAFLGGAPLAMAYKAVNTLDSMLGYKNERYRYFGWAPARIDDLANLVPARISGL LFPLAALLLGKNSLQSFKIVLRDARKHPSPNGGYSEAAVAGALGVRLGGLNYYHGEPS FREHLGDETRKLVAADIKAAIHLMYLTTGLFLISEILFVII" misc_feature 911114..912007 /locus_tag="Acear_0842" /note="CobD/Cbib protein; Region: CobD_Cbib; cl00561" /db_xref="CDD:193870" gene 912028..913416 /locus_tag="Acear_0843" /db_xref="GeneID:9512885" CDS 912028..913416 /locus_tag="Acear_0843" /note="COGs: COG1797 cobyrinic acid a c-diamide synthase; InterPro IPR002586:IPR011698:IPR017929:IPR004484; KEGG: dae:Dtox_3091 cobyrinic acid a,c-diamide synthase; PFAM: cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; SPTR: A4J816 Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase" /codon_start=1 /transl_table=11 /product="cobyrinic acid a,c-diamide synthase" /protein_id="YP_003827443.1" /db_xref="GI:302391623" /db_xref="GeneID:9512885" /translation="MQPRVVIAGTQSGVGKTTLATGLMAAMTKKGYDVQPYKVGPDYI DPGFHTAATERISRNLDSWMVSSDKLIELFDRNSQGADISIIEGVMGLFDGHRVDEGD GSTAEVAKILSAPVILIIDAGKMAQSGAALAYGYKHYDSELNLAGVILNRVSSDSHYQ ILKEPIEELGISVLGYIPRQESLELPERHLGLVPTSETSQMDDYIDDLAEVILQNLDL KELYNLAAETEEVEVKKKTLFSQTGPVSEVKLAVARDEAFNFYYEDNLDLLEENGVEL EYFSPVFDTALPEDIAGLYIGGGFPESFLAELSDNQSMQKSIKEAIVAGMPVYAECGG LMYLTEAITDFEGETHSMVGSISGRIEMTDRLQAMGYAEAEVKEDNILLNQGDKVRGH EFHYSRLVSLPEDTTYAYRLTGGKGRDNRAGGILKDNLLASYLHLHFASNPAVIDNLI DSCLKFIEGSSY" misc_feature 912028..913395 /locus_tag="Acear_0843" /note="cobyrinic acid a,c-diamide synthase; Validated; Region: PRK01077" /db_xref="CDD:179218" misc_feature 912028..912594 /locus_tag="Acear_0843" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" misc_feature 912775..913377 /locus_tag="Acear_0843" /note="Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase; Region: GATase1_CobB; cd03130" /db_xref="CDD:153224" misc_feature order(913021..913023,913339..913341,913345..913347) /locus_tag="Acear_0843" /note="catalytic triad [active]" /db_xref="CDD:153224" gene 913418..914017 /locus_tag="Acear_0844" /db_xref="GeneID:9512886" CDS 913418..914017 /locus_tag="Acear_0844" /EC_number="2.5.1.17" /note="COGs: COG2109 ATP:corrinoid adenosyltransferase; InterPro IPR003724; KEGG: hmo:HM1_1898 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: B0TFD9 ATP:corrinoid adenosyltransferase btur/cobo/cobp; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase" /codon_start=1 /transl_table=11 /product="Cob(I)yrinic acid a,c-diamide adenosyltransferase" /protein_id="YP_003827444.1" /db_xref="GI:302391624" /db_xref="GeneID:9512886" /translation="MNSELEQGLVQVYTGKGKGKTTASLGLALRAVGHGFKVVMIQFM KGSAYSGELFSTERLPNLSIKQFGRGCPYAALIREGLRKCDGCGECFLKGEEDEAKEE FKEYVDEAYSYAQKVLQNSEIDIVILDEINNALRYDLLAVDDVLDLISLKGDKTELIM TGRGFDDDILEAADLVTEMKAQKHPYADQGISSRRGIEY" misc_feature 913433..913975 /locus_tag="Acear_0844" /note="ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a...; Region: CobA_CobO_BtuR; cd00561" /db_xref="CDD:29983" misc_feature order(913436..913438,913469..913471,913481..913483, 913493..913498,913502..913519,913562..913564, 913568..913573,913577..913582,913886..913888, 913925..913930,913934..913957,913961..913966, 913970..913972) /locus_tag="Acear_0844" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:29983" misc_feature 913460..913480 /locus_tag="Acear_0844" /note="Walker A motif; other site" /db_xref="CDD:29983" misc_feature order(913469..913471,913475..913483,913505..913507, 913805..913807) /locus_tag="Acear_0844" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29983" misc_feature order(913550..913552,913559..913561,913643..913645, 913814..913816,913826..913828,913904..913906, 913973..913975) /locus_tag="Acear_0844" /note="hydroxycobalamin binding site [chemical binding]; other site" /db_xref="CDD:29983" misc_feature 913790..913804 /locus_tag="Acear_0844" /note="Walker B motif; other site" /db_xref="CDD:29983" gene 914043..914798 /locus_tag="Acear_0845" /db_xref="GeneID:9512887" CDS 914043..914798 /locus_tag="Acear_0845" /note="COGs: COG0368 Cobalamin-5-phosphate synthase; InterPro IPR003805; KEGG: pth:PTH_1313 cobalamin-5-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; SPTR: A5D2P6 Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase" /codon_start=1 /transl_table=11 /product="cobalamin 5'-phosphate synthase" /protein_id="YP_003827445.1" /db_xref="GI:302391625" /db_xref="GeneID:9512887" /translation="MLIRRLVTRLIISLQFLTRIPINADINYTSRNVGKSMIYYPIIG SLIGAILVGLNVGFSFLWSDLAVKALLLIAWIMITGGLHLDGYMDTIDGIFSGRSKQR MLEIMHDSRVGAHGVTGLMSLLLLKFVFLTELTAQIEVEVLLLVPTLSRWAMVYAAAF YPYAREEAGLGTAYAEFVETKELLIASLWTAVLAGLLLGVYGLAAFILVWIITVVIIR IITKRIDGLTGDCYGAINELIEVFALLALTLIY" misc_feature 914052..914792 /locus_tag="Acear_0845" /note="Cobalamin-5-phosphate synthase; Region: CobS; cl00415" /db_xref="CDD:185982" gene 914817..915725 /locus_tag="Acear_0846" /db_xref="GeneID:9512888" CDS 914817..915725 /locus_tag="Acear_0846" /note="COGs: COG4542 protein involved in propanediol utilization and related protein (includes coumermycin biosynthetic protein) possible kinase; InterPro IPR012363:IPR006204:IPR013750:IPR020568; KEGG: mta:Moth_1103 GHMP kinase; PFAM: GHMP kinase; GHMP kinase domain protein; SPTR: A1HPW0 GHMP kinase; PFAM: GHMP kinases N terminal domain" /codon_start=1 /transl_table=11 /product="GHMP kinase" /protein_id="YP_003827446.1" /db_xref="GI:302391626" /db_xref="GeneID:9512888" /translation="MKATVRAPGTCGELVQGTINGDNFHVTCPINCYSYVTVELTTEL KRSICNCNLSKTIKAVDKTLDYLGNDSLKARIEVDSNLISEKGMASSTADITAAILAT AVASGERITSDEIANLALSIEPTDGLFYEGIVLFDHVQGKRYRYLGEVAGIDILMLDL GGKVDTLDFNNRKDLAELNRKNEPETNRALKLAVEGIKEQNSKLIGRGATLSSQANQR ILAKPHFNKLLQLTELQGVWGINVAHSGTLLGILHDSKRIETEALKTEVQNMKDDLSI YNVKLINGGLEIIESSFNQERKYQYG" misc_feature 914817..915584 /locus_tag="Acear_0846" /note="Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism]; Region: PduX; COG4542" /db_xref="CDD:34189" gene 915718..916824 /locus_tag="Acear_0847" /db_xref="GeneID:9512889" CDS 915718..916824 /locus_tag="Acear_0847" /note="COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterProIPR004838:IPR001176:IPR015421:IPR015422:IPR 004839:IPR015424:IPR005860; KEGG: dae:Dtox_3089 L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; SPTR: C1TJJ7 L-threonine-O-3-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; histidinol-phosphate aminotransferase" /codon_start=1 /transl_table=11 /product="L-threonine-O-3-phosphate decarboxylase" /protein_id="YP_003827447.1" /db_xref="GI:302391627" /db_xref="GeneID:9512889" /translation="MASNKRIHGGNIKAAADKYGLKPDKIIDFSANINFLGPPAVVED VIKDNLDDIVNYPEPNAQSLSLALAEYHGVEAENLIVGNGAVELIYLVSKVISPEQAL VLAPTFSEYEAAVESVGGEVNLFELNRANKFSLEIDELIVELNNSQLDLLFLCNPNNP TGDLISKDDLLKLLATAEKNDVFVIVDEAFLDFLWAEADYTLISKAAAVDNLLVLRSM TKFFAIPGLRVGYAVTNRQLVTKLEENKDPWNVNLFAQRVGTEVVAEDKYIQKTKEAI NREKKFLYQSLEKLTGCEPYQPAANYILIDISKTEYTSTELKDRLASKGILIRDCSSY HLLGSNFIRVAVKGREDNQQLIAALKSLLEAGGE" misc_feature 915718..916818 /locus_tag="Acear_0847" /note="Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]; Region: HisC; COG0079" /db_xref="CDD:30428" misc_feature 915796..916797 /locus_tag="Acear_0847" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature order(915967..915975,916039..916041,916192..916194, 916285..916287,916366..916368,916372..916377, 916399..916401) /locus_tag="Acear_0847" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature order(915976..915978,916069..916071,916264..916266, 916393..916401,916480..916482,916489..916491) /locus_tag="Acear_0847" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature 916375..916377 /locus_tag="Acear_0847" /note="catalytic residue [active]" /db_xref="CDD:99734" gene 916828..917439 /locus_tag="Acear_0848" /db_xref="GeneID:9512890" CDS 916828..917439 /locus_tag="Acear_0848" /note="COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR001345:IPR013078:IPR017578; KEGG: mta:Moth_1105 phosphoglycerate mutase; PFAM: phosphoglycerate mutase; SPTR: Q2RJH0 phosphoglycerate mutase; TIGRFAM: alpha-ribazole phosphatase; PFAM: phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase" /codon_start=1 /transl_table=11 /product="alpha-ribazole phosphatase" /protein_id="YP_003827448.1" /db_xref="GI:302391628" /db_xref="GeneID:9512890" /translation="MATEIILVRHGETLWNKESRFQGSADVKLSSDGVKQAERLAERF ADFRLDMVYASDLQRAAKTAEIVADQHGININTEAKLREANFGVWEGLTFEEIKERDG EKLDAWLKDPVTVQTPEGENFEEVQKRAKEGLNRIKTKHEDEQVLVVAHGGTIRALLV DLLGMPLSNFWRIQQDNTAVNIVKFYDGDPIVSLINCTQHLRE" misc_feature 916837..917415 /locus_tag="Acear_0848" /note="Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction; Region: HP_PGM_like; cd07067" /db_xref="CDD:132718" misc_feature order(916852..916857,917002..917004,917278..917283) /locus_tag="Acear_0848" /note="catalytic core [active]" /db_xref="CDD:132718" gene 917441..917671 /locus_tag="Acear_0849" /pseudo /db_xref="GeneID:9512891" gene 917824..918606 /locus_tag="Acear_0850" /db_xref="GeneID:9512892" CDS 917824..918606 /locus_tag="Acear_0850" /note="COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR000943:IPR011991:IPR007627:IPR007624:IPR 007630:IPR013325:IPR013324:IPR014212:IPR014322:IPR014284; KEGG: hor:Hore_09160 sporulation sigma factor SigG; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: B8CWK3 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma subunit, RpsG/SigG" /protein_id="YP_003827449.1" /db_xref="GI:302391629" /db_xref="GeneID:9512892" /translation="MGNKVDISGVNTSELPVLSNEEMRELFKKMQNGDREARQTIVGG NLKLVLSVLQRFNNRGEPIDDLFQVGCIGLMKAIDNFDLSRNVKFSTYAVPMIIGEIR RHLRDHNPIRVSRSLRDTAYKALQMKESLENKTSEEPTLTEIAQELGIPREEIVQALD AIQDPISLFEPIYQDGGDPIYVMDQVSDDDSEDESWLEGIAVREALRQLEDREKLILS MRFYKGKTQMEVADNIGISQAQVSRLEKAALENLEKYVSEER" misc_feature 917824..918594 /locus_tag="Acear_0850" /note="sporulation sigma factor SigG; Reviewed; Region: PRK08215" /db_xref="CDD:181296" misc_feature 917944..918147 /locus_tag="Acear_0850" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature 918178..>918357 /locus_tag="Acear_0850" /note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539" /db_xref="CDD:146934" misc_feature 918421..918579 /locus_tag="Acear_0850" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cd06171" /db_xref="CDD:100119" misc_feature order(918451..918453,918481..918483,918499..918504, 918532..918534,918538..918543,918547..918555, 918559..918564,918568..918570) /locus_tag="Acear_0850" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:100119" gene 918608..919294 /locus_tag="Acear_0851" /db_xref="GeneID:9512893" CDS 918608..919294 /locus_tag="Acear_0851" /note="InterPro IPR014202; KEGG: cce:Ccel_0292 stage II sporulation protein R; PFAM: sporulation stage II protein R; SPTR: C7ID14 Stage II sporulation protein R; TIGRFAM: stage II sporulation protein R; PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R" /codon_start=1 /transl_table=11 /product="stage II sporulation protein R" /protein_id="YP_003827450.1" /db_xref="GI:302391630" /db_xref="GeneID:9512893" /translation="MKKIRLMAITVIALVILVGFGTSSAVVFTPEQDTTAYKHKNLLR LHVIANSNSVNDQKIKRKVRNRIMNQTKKLFIGVTDADKAQEVVKENLGYIESVAEAE LASLDSNCQVKVKLGNFHFPKRTYGSKTLPAGDYNALRIIIGQGQGQNWWCVLFPPFC YIDSVNKKEAKKNFEALEKEEVNIKVKSKFMEYVKSNPQLTQKKKEITNLLRTSVTDL DNLISNLTSD" misc_feature 918725..919105 /locus_tag="Acear_0851" /note="Stage II sporulation protein R (spore_II_R); Region: Spore_II_R; cl09775" /db_xref="CDD:158692" gene 919432..919701 /locus_tag="Acear_0852" /db_xref="GeneID:9512894" CDS 919432..919701 /locus_tag="Acear_0852" /note="InterPro IPR007903:IPR011033:IPR014238; KEGG: aac:Aaci_1292 sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; SPTR: C1PSR5 sporulation protein, YlmC/YmxH family; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family" /codon_start=1 /transl_table=11 /product="sporulation protein, YlmC/YmxH family" /protein_id="YP_003827451.1" /db_xref="GI:302391631" /db_xref="GeneID:9512894" /translation="MIKTSELKKKEVISVNGERLGLIKDIELDLNKGKIKAVVVPGEK KLFGVLSDPDDLVINWNQIQKIGEDVILVNLDEFANFENDITEVK" misc_feature 919438..919656 /locus_tag="Acear_0852" /note="Photosynthetic reaction center (RC) complex, subunit H; RC is an integral membrane protein-pigment complex which catalyzes light-induced reduction of ubiquinone to ubiquinol, generating a transmembrane electrochemical gradient of protons used to...; Region: PRCH; cl09959" /db_xref="CDD:164180" gene 919795..920214 /locus_tag="Acear_0853" /db_xref="GeneID:9512895" CDS 919795..920214 /locus_tag="Acear_0853" /note="COGs: COG0864 transcriptional regulator protein containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; InterPro IPR013321:IPR014864:IPR002145:IPR010985; KEGG: dvm:DvMF_1320 nickel responsive regulator; PFAM: NikR nickel binding; CopG domain protein DNA-binding domain protein; SPTR: C0GGF1 Putative transcriptional regulator, CopG family; PFAM: Ribbon-helix-helix protein, copG family; NikR C terminal nickel binding domain; TIGRFAM: nickel-responsive transcriptional regulator NikR" /codon_start=1 /transl_table=11 /product="CopG family transcriptional regulator" /protein_id="YP_003827452.1" /db_xref="GI:302391632" /db_xref="GeneID:9512895" /translation="MDELVRFGISMKESLLNKFDDLIANKGYSNRSEAIRDLIRNRLV ENEWEDEKKEVAGTVTLIYDHHSSGLSDKLNTIQHDAHHLFLSTTHVHLDHHNCLEVL VVKGKAGEVRSIAERLIGVKGVKHGKLTITSTGKNLD" misc_feature 919801..920208 /locus_tag="Acear_0853" /note="nickel responsive regulator; Provisional; Region: PRK04460" /db_xref="CDD:179855" misc_feature 919960..920196 /locus_tag="Acear_0853" /note="NikR C terminal nickel binding domain; Region: NikR_C; pfam08753" /db_xref="CDD:192144" gene 920296..921108 /locus_tag="Acear_0854" /db_xref="GeneID:9512896" CDS 920296..921108 /locus_tag="Acear_0854" /note="COGs: COG1496 conserved hypothetical protein; InterPro IPR003730:IPR011324; KEGG: pth:PTH_1832 hypothetical protein; PFAM: protein of unknown function DUF152; SPTR: A5D154 Uncharacterized conserved protein; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: conserved hypothetical protein TIGR00726" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827453.1" /db_xref="GI:302391633" /db_xref="GeneID:9512896" /translation="MFKLIEGKKVKYYTIEEFADTDLVTHAFSTRLGGISKGDFAELN LGFHTGDRTENVLKNRQRLCDELEIDYRQLVAGEQVHSDNIEIVTEADRGKGAVEYRD SIPETDALITNQRDVVLTSYYADCVPVIILDPVKEVAALAHGGWKGTVKKIGQKTVLK MKQEFGSEPEDILVGIGPSIGSCCYEVDDYVIKPLSQSVDYWEELVIKTGDNSWKLDL WQANSRQLQDIGVLKENIIVSEICTACNTDKLYSYRAESGTTGRMASLIKLK" misc_feature 920365..921105 /locus_tag="Acear_0854" /note="Multicopper polyphenol oxidase (laccase) [Secondary metabolites biosynthesis, transport and catabolism]; Region: yfiH; COG1496" /db_xref="CDD:31685" misc_feature 920377..921096 /locus_tag="Acear_0854" /note="Multi-copper polyphenol oxidoreductase laccase; Region: Cu-oxidase_4; cl00650" /db_xref="CDD:186127" gene 921128..921835 /locus_tag="Acear_0855" /db_xref="GeneID:9512897" CDS 921128..921835 /locus_tag="Acear_0855" /note="COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: chy:CHY_2047 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: Q3AAG8 DNA-binding response regulator; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, winged helix family" /protein_id="YP_003827454.1" /db_xref="GI:302391634" /db_xref="GeneID:9512897" /translation="MKEKKILVVDDEENIVELVKFNLEKEGYQVFVTYDGQAALDKLQ EEDIDLLVLDLMLPEIGGLDICRQIRNDDELSDLPIIMLTAKEKEVDRILGLELGADD YVTKPFSPRELVARVKAILRRTGSSGQKTDEDCIKLGEIVIDLNKYEVLLDDKQVNFT PKEFELLMLLAKNAGKVLTRNFLLKEIWGYGYNGDTRTVDVHIRRTRQKLNNNLAEDV EYIETVRGVGYRFKELE" misc_feature 921137..921832 /locus_tag="Acear_0855" /note="Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]; Region: OmpR; COG0745" /db_xref="CDD:31088" misc_feature 921146..921490 /locus_tag="Acear_0855" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(921155..921160,921287..921289,921311..921313, 921377..921379,921434..921436,921443..921448) /locus_tag="Acear_0855" /note="active site" /db_xref="CDD:29071" misc_feature 921287..921289 /locus_tag="Acear_0855" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(921296..921301,921305..921313) /locus_tag="Acear_0855" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 921443..921451 /locus_tag="Acear_0855" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 921533..921820 /locus_tag="Acear_0855" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cd00383" /db_xref="CDD:29475" misc_feature order(921605..921607,921662..921667,921719..921721, 921728..921730,921752..921757,921794..921796, 921809..921811) /locus_tag="Acear_0855" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29475" gene 921839..923617 /locus_tag="Acear_0856" /db_xref="GeneID:9512898" CDS 921839..923617 /locus_tag="Acear_0856" /note="COGs: COG5002 Signal transduction histidine kinase; InterProIPR004358:IPR003594:IPR003660:IPR013656:IPR 003661:IPR005467:IPR000014:IPR009082; KEGG: amt:Amet_2865 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; SPTR: A6TS47 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box" /codon_start=1 /transl_table=11 /product="multi-sensor signal transduction histidine kinase" /protein_id="YP_003827455.1" /db_xref="GI:302391635" /db_xref="GeneID:9512898" /translation="MFFKSIRWKIMALWLVLIISVLIISGLILNDRLKHHFTTQLEED LIKETKLIRTLLQDRISSSQRQVEEIDKLVTEYGDKIDARITIIDADGLVLGDSEEVP TDMDNHLHRPEVQQALESEVGKSTRYSKTLQMNMKYIALAVKSENEITGIVRLALPLT QVENSLFDIFWRLIFSGVVAIIISLILGLKLTKRITDPIDRMTQVAARMAQGNLDQRL SFNFQDELGRLSRAFNNMADKLEAKINEISGEKNKIEAILRGMGDGVIAVDEDGKIIL LNPAAEEIFQLKEEKTLGKYTMEVTRSHKLDDAIMASLKNGEDITEEIETIYPVERMI RVHVTPIKNDKTTERGAVAVLRDVTELRRLEQIRTEFVSNVSHELRTPLTSIKGYVET LLDERDCEPGVRERFLQVIKDETDRLERLITDLLNLSQLESASDSFDQELVNLNQVIE NVLTTVMPKADNKGIDLKVDVPVDITGIKGSRGQLERLYINLVDNGIKYTSEGGQVKI KVYEDEDRVWSEIIDTGMGIPEEDLPRIFERFYRVDKTRSRKLGGTGLGLSIVKHILE RHNGGIEVESKVEEGTKFIFWLPKPK" misc_feature 921962..>922567 /locus_tag="Acear_0856" /note="sensory histidine kinase CreC; Provisional; Region: PRK11100" /db_xref="CDD:182962" misc_feature 922421..922564 /locus_tag="Acear_0856" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cd06225" /db_xref="CDD:100122" misc_feature order(922421..922426,922433..922438,922442..922447, 922454..922459,922463..922465,922511..922516, 922520..922525,922532..922537,922541..922546, 922553..922558) /locus_tag="Acear_0856" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100122" misc_feature 922577..923596 /locus_tag="Acear_0856" /note="phosphate regulon sensor kinase PhoR; Region: phoR_proteo; TIGR02966" /db_xref="CDD:163090" misc_feature 922619..922912 /locus_tag="Acear_0856" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature order(922667..922669,922679..922681,922697..922699, 922736..922744,922814..922816) /locus_tag="Acear_0856" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature order(922727..922729,922739..922741,922754..922756, 922763..922768,922844..922846,922850..922852) /locus_tag="Acear_0856" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature 922931..923128 /locus_tag="Acear_0856" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature order(922949..922951,922961..922963,922973..922975, 922982..922984,922994..922996,923003..923005, 923057..923059,923069..923071,923078..923080, 923090..923092,923099..923101,923111..923113) /locus_tag="Acear_0856" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature 922967..922969 /locus_tag="Acear_0856" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature 923291..923602 /locus_tag="Acear_0856" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(923309..923311,923321..923323,923330..923332, 923399..923401,923405..923407,923411..923413, 923417..923422,923501..923512,923558..923560, 923564..923566,923579..923584,923588..923590) /locus_tag="Acear_0856" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 923321..923323 /locus_tag="Acear_0856" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(923411..923413,923417..923419,923501..923503, 923507..923509) /locus_tag="Acear_0856" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(923702..923854) /locus_tag="Acear_0857" /db_xref="GeneID:9512899" CDS complement(923702..923854) /locus_tag="Acear_0857" /note="KEGG: cbi:CLJ_0075 hypothetical protein; SPTR: C3KS83 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827456.1" /db_xref="GI:302391636" /db_xref="GeneID:9512899" /translation="MARKNINTTLDEDLYKKIKVLAIELDKNANDLIEEGMEYIINKY ENQKNV" gene 923951..925216 /locus_tag="Acear_0858" /db_xref="GeneID:9512900" CDS 923951..925216 /locus_tag="Acear_0858" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: cbi:CLJ_0076 transposase; PFAM: transposase IS605 OrfB; SPTR: C3KS84 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003827457.1" /db_xref="GI:302391637" /db_xref="GeneID:9512900" /translation="MKLSFKFKPNFSHKQLEIIKELSWHCSKLYNTVNYQIKNNEDVK PVYTKLEKQFKSNWHTDYLHSHNRQQLFKQLAQDWKSYFNSIKDYNNNLSKYQGQPKP PNFKYLDSNPSEIIFTNLATRVRENNLLLSLSKEIKNQYQVDSLKFELPPAVQSLINL DNLQQVRIKKDNLSSDWYLIIIHKVNEKENASGDNLMSIDLGLDNLATLTFKDDIDSY IINGKPLKSKNKYFNQEINRLQSIRMKQTSSKKFKDTKQIKKLRIKRQNYISNYLHQA SRKIINLAKNNNVSKIVIGDLKQIKQNMNYNKSFVQVPIQRLKDLIEYKAKLAGIKVY IINEAYTSGCSALDKEKLNKVNYNKFRRVERGLFFTEDSIPINADVNGSLNIMRKFLK DKCIPEMVDKFHSRDNGAVNSPERIRVAR" misc_feature 923951..925123 /locus_tag="Acear_0858" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature 924137..924853 /locus_tag="Acear_0858" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature 924743..924976 /locus_tag="Acear_0858" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature 924899..925117 /locus_tag="Acear_0858" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 925592..926503 /locus_tag="Acear_0859" /db_xref="GeneID:9512901" CDS 925592..926503 /locus_tag="Acear_0859" /note="COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR006059:IPR011862; KEGG: hor:Hore_21620 phosphate binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: B8D0H2 phosphate binding protein; TIGRFAM: phosphate binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate binding protein" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter substrate-binding protein, PhoT family" /protein_id="YP_003827458.1" /db_xref="GI:302391638" /db_xref="GeneID:9512901" /translation="MINRKVVALSLVLLMTVGVLFTATGQAEAWGIFGDDEEKQEEKV EENGNQGSDEKAKNLSIQGSSTVLPIAQRAAEVYMEKNPEVNITVRGGGSGNGIAALV DGAVDIADASRFIKEGEYDQARDNGIYPVPHRVAMDGIAVVLHPSNSVDGLTLDEIKA IYTGEITNWKELGGEDEEIVVVSRDSSSGTFEVFGEIALEGEKVAPSALMQASNGAVS GTVSETEGAIGYVGLGYLSDDLKAVKVNGVKPSNATVASGAFPIARPLFMFTDGWPEG LTAKFINFVLSAEGQEIAEEQGYVPLH" misc_feature 925754..926497 /locus_tag="Acear_0859" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene 926594..928768 /locus_tag="Acear_0860" /db_xref="GeneID:9512902" CDS 926594..928768 /locus_tag="Acear_0860" /note="COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR000644:IPR000160; KEGG: hmo:HM1_2081 signal transduction protein, PFAM: EAL domain protein; hypothetical protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: B0TGE2 Signal transduction protein, PFAM: EAL domain; CBS domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain" /codon_start=1 /transl_table=11 /product="diguanylate cyclase/phosphodiesterase" /protein_id="YP_003827459.1" /db_xref="GI:302391639" /db_xref="GeneID:9512902" /translation="MLENIKNSIKGLLDYGMNGYIRENLTDTLTDLPIIPVFHDKLHK YLKIEGKNVGVVCLDIVNFSHIEKEYGYKACEKILLGLTDILDDICDNLVRAEDKIGI SNRGGDDFIIFLAGLEDTITEAEKSLQIVANRIKSQAVDRLNKRDYIEKSLNLYVGYT VISGKNVKRVESAVYKAIKEADKRAKDEEYQKWIKKKNRLAEIIDQEQIQILYQPLIS LQSGEKMGYEALTRGPEGSEFERPDYLFGFAKETDLLLDLEHLCRRKSIIDATDFLDG ERLSINVSPEVIEVDDFKKGVTEQLISDLEMNKKNIIFEITEKTAINNFDIFRKTLKH YYGQGYQIAVDDVGAGYANLQTISELHPQYIKLDMSLVRKVNIDTTKEALLEALINFA HRIDAKVIAEGIEDYDELEKLIELGVDYGQGYLIQHPLSTPKPIDQSLKQFILKKNEE LEKSITINTLKIEKIARQDITLHQDDLVEKAVNYFEQNHYLTGIVVVNDEETPVGLIM KDELYYRLGKRFGVSLFKQRSVELIMEKHPLIVDGEETIKEVSRQAMSREHDRIYNYI VVTKEDKYYGSVSIRSLLEHITKMQVDVAQNLNPLTGLPGNSLIEQQLDKAINNNSDL AIMYIDLDNFKAFNDNYGFENGDRVIKLTADILVNLTRQGDFVGHIGGDDFIVITEAK GAKAVSQRIINRYEDEVKEIVNDKTCFLYQPTISISVEQLLS" misc_feature 926666..927124 /locus_tag="Acear_0860" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(926768..926770,926915..926917) /locus_tag="Acear_0860" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(926783..926785,926792..926797,926807..926809, 926831..926833,926906..926908,926909..926920) /locus_tag="Acear_0860" /note="active site" /db_xref="CDD:143635" misc_feature order(926885..926887,926993..926995) /locus_tag="Acear_0860" /note="I-site; other site" /db_xref="CDD:143635" misc_feature 927185..927886 /locus_tag="Acear_0860" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:30163" misc_feature 927977..928345 /locus_tag="Acear_0860" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature 927992..928348 /locus_tag="Acear_0860" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain. The GGDEF domain has been suggested to be homologous to the adenylyl cyclase catalytic domain...; Region: CBS_pair_GGDEF_assoc; cd04598" /db_xref="CDD:73098" misc_feature 928391..>928750 /locus_tag="Acear_0860" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(928481..928483,928610..928612) /locus_tag="Acear_0860" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(928496..928498,928505..928510,928520..928522, 928532..928534,928598..928600,928604..928615) /locus_tag="Acear_0860" /note="active site" /db_xref="CDD:143635" misc_feature order(928586..928588,928661..928663) /locus_tag="Acear_0860" /note="I-site; other site" /db_xref="CDD:143635" gene 928911..929612 /locus_tag="Acear_0861" /db_xref="GeneID:9512903" CDS 928911..929612 /locus_tag="Acear_0861" /note="COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: tpd:Teth39_0825 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C6Q3M2 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, winged helix family" /protein_id="YP_003827460.1" /db_xref="GI:302391640" /db_xref="GeneID:9512903" /translation="MGEDHILVVDDEKNILELVKYNLIQEGYEVSLAINGEKALKKVD DIAPDLIILDIMLPGLDGFEVCHCLQEMEKTEGIPIIFLSAKSEVEDKVKGLNLGATD YLTKPFSPRELASRVKAVSRRINQNPYHKKETLRYGKLTMDLKGYRVLINKEEIDLTN KEFNLLAYLIDKLGKVCSRDELLANVWGYENVSGIRTVDVHIRMLRKKFTQYNIESLL IKTVQGVGYKLVKNN" misc_feature 928923..929606 /locus_tag="Acear_0861" /note="Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]; Region: OmpR; COG0745" /db_xref="CDD:31088" misc_feature 928929..929270 /locus_tag="Acear_0861" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(928938..928943,929070..929072,929094..929096, 929160..929162,929217..929219,929226..929231) /locus_tag="Acear_0861" /note="active site" /db_xref="CDD:29071" misc_feature 929070..929072 /locus_tag="Acear_0861" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(929079..929084,929088..929096) /locus_tag="Acear_0861" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 929226..929234 /locus_tag="Acear_0861" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 929313..929597 /locus_tag="Acear_0861" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cd00383" /db_xref="CDD:29475" misc_feature order(929385..929387,929442..929447,929499..929501, 929508..929510,929532..929537,929571..929573, 929586..929588) /locus_tag="Acear_0861" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29475" gene 929729..930649 /locus_tag="Acear_0862" /db_xref="GeneID:9512904" CDS 929729..930649 /locus_tag="Acear_0862" /note="COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR011862; KEGG: hor:Hore_21580 phosphate binding protein; SPTR: B8D0G7 phosphate binding protein; TIGRFAM: phosphate binding protein; TIGRFAM: phosphate binding protein" /codon_start=1 /transl_table=11 /product="phosphate binding protein" /protein_id="YP_003827461.1" /db_xref="GI:302391641" /db_xref="GeneID:9512904" /translation="MKKLFNKKLVVLVSLVALVGIVAVGCGGNQQSQGDYVQVKGSDT MVNMVQVLSEKYMGEKEDASISVTGGGSGTGIAALINDKVDIANASRIMKDEEIQQAK DNGVEPKRFVIGMDGLAVVVNGENSIKDLTVEEIGKIFRGDITNWKEIGGPDKEISLY GRQSNSGTFVYFKDNVLESDYSADMKRMNGNAQIVEAIKEDKAGIGYVGIGYVVKDGE VIDGLNVLNVAKDADAKAASPLKPENVKTGAYPLARPLNQYTNGKPTGAILDFIKYEL SEEGQKIAVEEGFYPVSPEFKKINQKNLTD" misc_feature 929837..930604 /locus_tag="Acear_0862" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene 931170..932060 /locus_tag="Acear_0863" /db_xref="GeneID:9512905" CDS 931170..932060 /locus_tag="Acear_0863" /note="COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR011864; KEGG: hor:Hore_21570 phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B8D0G6 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter, permease protein PstA" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter membrane protein 1, PhoT family" /protein_id="YP_003827462.1" /db_xref="GI:302391642" /db_xref="GeneID:9512905" /translation="MKKKGSLSRLKEKGIELFFFGNGILAIIILIGIFYLLVSEGLPM FEEVGFKEFLTSTRWNPTSSNPGYGILSLIVSTLLVTIGSLIFSVPLGIACAAYLAEV ADSRVREALKPVIEILAGIPSVVIGFLGIVLVGPMIADLFNLSNGLNAINGSILLGIM ALPTIISISEDAISAVPEEYKEASLALGANRWHTLIKVVLPAALSGITAAVMLGMGRA IGETMAVLMATGNAPALPGSIFDSVRTMTATIAVELGEVPYNTTHYYSLFAIGLVLFV MTFIVNLVSDIVLHKYGEGQ" misc_feature 931281..932045 /locus_tag="Acear_0863" /note="phosphate ABC transporter, permease protein PstC; Region: phosphate_pstC; TIGR02138" /db_xref="CDD:162724" misc_feature 931398..931886 /locus_tag="Acear_0863" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(931437..931442,931449..931454,931467..931469, 931500..931511,931515..931544,931551..931556, 931560..931562,931644..931649,931653..931655, 931659..931661,931668..931673,931677..931679, 931689..931694,931701..931703,931752..931754, 931794..931799,931806..931808,931827..931838, 931845..931850) /locus_tag="Acear_0863" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(931518..931562,931827..931844) /locus_tag="Acear_0863" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(931560..931562,931620..931622,931845..931847, 931881..931883) /locus_tag="Acear_0863" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(931704..931742,931758..931763,931773..931775) /locus_tag="Acear_0863" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 932060..932911 /locus_tag="Acear_0864" /db_xref="GeneID:9512906" CDS 932060..932911 /locus_tag="Acear_0864" /note="COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR005672; KEGG: hor:Hore_21560 phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B8D0G5 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter membrane protein 2, PhoT family" /protein_id="YP_003827463.1" /db_xref="GI:302391643" /db_xref="GeneID:9512906" /translation="MKTNELKQKIGFGILRLSALVILLILGTILYDIISKGIGVINWG FITEAPKQGMTAGGIWPAIVGTFLVTLITAAVAIPLGIFAAIYLNEYANQGKITRLIR MSIRNLAGVPSIVYGLFGLAFFVNILGLGTSVLSAGLTLGLMTLPVTITASEEALKAV PDAYRQGALALGASKWYSIRTNVLPHAIPGILTGTILGLARAAGETAPILFTGAAFFL PFLPKSLSSQFMALPYHLYIMATQHHDIAQVRPLAYGTALVLITLVLAMNLIAILLRF WLRKKKE" misc_feature 932144..932899 /locus_tag="Acear_0864" /note="phosphate ABC transporter, permease protein PstA; Region: 3a0107s02c; TIGR00974" /db_xref="CDD:162141" misc_feature 932246..932701 /locus_tag="Acear_0864" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature order(932294..932299,932306..932311,932324..932326, 932360..932371,932375..932404,932411..932416, 932420..932422,932486..932491,932495..932497, 932501..932503,932510..932515,932519..932521, 932531..932536,932543..932545,932594..932596, 932636..932641,932648..932650,932669..932680, 932687..932692) /locus_tag="Acear_0864" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(932378..932422,932669..932686) /locus_tag="Acear_0864" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature order(932420..932422,932471..932473,932687..932689) /locus_tag="Acear_0864" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature order(932546..932584,932600..932605,932615..932617) /locus_tag="Acear_0864" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene 932939..933715 /locus_tag="Acear_0865" /db_xref="GeneID:9512907" CDS 932939..933715 /locus_tag="Acear_0865" /EC_number="3.6.3.27" /note="COGs: COG1117 ABC-type phosphate transport system ATPase component; InterProIPR017871:IPR003439:IPR015850:IPR003593:IPR 005670; KEGG: hor:Hore_21550 phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8D0G4 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter ATP-binding protein, PhoT family" /protein_id="YP_003827464.1" /db_xref="GI:302391644" /db_xref="GeneID:9512907" /translation="MVEEVNNNSEKIVVEDLDFYYDDFQALEDVTLRVPPNQVTALIG PSGCGKSTFLRTLNRMNDLIEGTKVEGTVLIDGKDIYQEDLDVVSLRKRVGMVFQEPN PFPKSIYNNVAYGPKAHGIKDKAELDEIVEESLKRAALWDEVNDRLDKSAIGISGGQQ QRLCIARALAVNPDILLMDEPTSALDPVATAKIEELVEELKKNYTVVIVTHSMQQAAR ISDHTAFFLTGEVVETGPTEKIFERPEDQRTEDYITGRFG" misc_feature 932966..933712 /locus_tag="Acear_0865" /note="phosphate transporter ATP-binding protein; Provisional; Region: PRK14240" /db_xref="CDD:184586" misc_feature 932972..933658 /locus_tag="Acear_0865" /note="Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein...; Region: ABC_PstB_phosphate_transporter; cd03260" /db_xref="CDD:73019" misc_feature 933068..933091 /locus_tag="Acear_0865" /note="Walker A/P-loop; other site" /db_xref="CDD:73019" misc_feature order(933077..933082,933086..933094,933233..933235, 933473..933478,933569..933571) /locus_tag="Acear_0865" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73019" misc_feature 933224..933235 /locus_tag="Acear_0865" /note="Q-loop/lid; other site" /db_xref="CDD:73019" misc_feature 933401..933430 /locus_tag="Acear_0865" /note="ABC transporter signature motif; other site" /db_xref="CDD:73019" misc_feature 933461..933478 /locus_tag="Acear_0865" /note="Walker B; other site" /db_xref="CDD:73019" misc_feature 933485..933496 /locus_tag="Acear_0865" /note="D-loop; other site" /db_xref="CDD:73019" misc_feature 933557..933577 /locus_tag="Acear_0865" /note="H-loop/switch region; other site" /db_xref="CDD:73019" gene 933746..934396 /locus_tag="Acear_0866" /db_xref="GeneID:9512908" CDS 933746..934396 /locus_tag="Acear_0866" /note="COGs: COG0704 phosphate uptake regulator; InterPro IPR008170; KEGG: hor:Hore_21540 phosphate uptake regulator, PhoU; PFAM: PhoU family protein; SPTR: B8D0G3 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU" /codon_start=1 /transl_table=11 /product="phosphate uptake regulator, PhoU" /protein_id="YP_003827465.1" /db_xref="GI:302391645" /db_xref="GeneID:9512908" /translation="MVRSNFNQELEELNQKLLKMGSMVEEAIHKSVTSLAEKDVELAE EVMENDDLIDEAEVEIEKRCIKLIALQQPVAKDLRTIGMISKIITDLERMGDLAYNIA RITTEIAGESLIKPLVDIPHMTRITQDMVRESLDAFVNLDSEKAYEVAEMDDEVDRIN EQILRELLTYMMEDASTISQATRLMFVGRYLERIADHATNICERIIYMVTGEREEL" misc_feature 933803..934384 /locus_tag="Acear_0866" /note="phosphate transport system regulatory protein PhoU; Region: phoU_full; TIGR02135" /db_xref="CDD:162721" misc_feature 933803..934060 /locus_tag="Acear_0866" /note="PhoU domain; Region: PhoU; pfam01895" /db_xref="CDD:190154" misc_feature 934103..934360 /locus_tag="Acear_0866" /note="PhoU domain; Region: PhoU; pfam01895" /db_xref="CDD:190154" gene 934519..935430 /locus_tag="Acear_0867" /db_xref="GeneID:9512909" CDS 934519..935430 /locus_tag="Acear_0867" /note="KEGG: hor:Hore_09210 membrane fusion protein; SPTR: B8CWK8 Putative membrane fusion protein; TIGRFAM: membrane fusion protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827466.1" /db_xref="GI:302391646" /db_xref="GeneID:9512909" /translation="MTRKRIRSKADSQKNKFGVTKILMAIIAFIIALSVVLNLFFHTT DKTVLSKYGKIRDEFKTEGLFVRRESVTIAPISGRLNLKVEARTKVQASTLVAQIKNN RSKYNLYSYNSGLVSYHTDGLESTLQPENIDELTYKQFQKLGYKIHRIHNGTNVNNGR PIFKIVDNFLLYLVTPISKDKSQLFKPGMEVEFELPQKTEDRYTARVDRIINSQNKDM LVLDVKRFISLFMKLRKTEVNLIKSSYNGIVVPITALVSKEGKTGVMVVKNEQASFKE VKIVGKNQNQAVIKGIDVGVKIFKDPE" misc_feature 934669..>934851 /locus_tag="Acear_0867" /note="HlyD family secretion protein; Region: HlyD_2; pfam12700" /db_xref="CDD:193176" misc_feature 934855..935391 /locus_tag="Acear_0867" /note="putative membrane fusion protein; Region: TIGR02828" /db_xref="CDD:131875" gene 935443..936753 /locus_tag="Acear_0868" /db_xref="GeneID:9512910" CDS 935443..936753 /locus_tag="Acear_0868" /note="COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714:IPR006596; KEGG: geo:Geob_2932 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; SPTR: B9M2S9 PhoH family protein; PFAM: PhoH-like protein" /codon_start=1 /transl_table=11 /product="PhoH family protein" /protein_id="YP_003827467.1" /db_xref="GI:302391647" /db_xref="GeneID:9512910" /translation="MKKTYVLDTNVLLHDPGALFAFDDNDIIIPIVVIEEIDAQKKRQ NSIGRSARQVSRYLDDLREKGELYKGVELRQGGTLKIELNHQMLDQLPLSLSEEKADN RILSTAMGLDEDSEVNKPIILVTKDINMRVKSDALGIKAEDYETNKINIEELYSGLST VKVDPELIDQFYSEEELELEQDFYPNQFILLEDNVGGSQSALCRYDDERNLLRPLIFQ GTDTWGITPRNKEQQCAFDMLLNDEIKLITLVGKAGTGKTLLALAVGLEKVVELKDFN RLLVTRPIVPMGNDLGYLPGDKKEKLRPWMQPIYDNMELLVGSRDGDAADMIQNLQDM NLIEMEALTYIRGRSIPQQFIIVDEAQNLTPHEIKTIITRVGEGTKIILTGDPYQIDN PYLDSNSNGLTYLAERFKDQKIAGHITLRSGERSELAELAASVL" misc_feature 935443..936750 /locus_tag="Acear_0868" /note="NYN ribonuclease and ATPase of PhoH family domains [General function prediction only]; Region: COG1875" /db_xref="CDD:32059" misc_feature 935449..935892 /locus_tag="Acear_0868" /note="PIN domain of bacterial Smg6-like homologs with PhoH-like ATPase domains; Region: PIN_PhoHL-ATPase; cd09883" /db_xref="CDD:189053" misc_feature order(935464..935466,935548..935550,935743..935745, 935821..935823) /locus_tag="Acear_0868" /note="putative active site [active]" /db_xref="CDD:189053" misc_feature 936112..936732 /locus_tag="Acear_0868" /note="PhoH-like protein; Region: PhoH; cl12134" /db_xref="CDD:196351" gene 936896..938791 /locus_tag="Acear_0869" /db_xref="GeneID:9512911" CDS 936896..938791 /locus_tag="Acear_0869" /note="COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003594:IPR013656:IPR005467:IPR 000014:IPR000700:IPR009082; KEGG: hor:Hore_07420 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; SPTR: B8CW30 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box" /codon_start=1 /transl_table=11 /product="multi-sensor signal transduction histidine kinase" /protein_id="YP_003827468.1" /db_xref="GI:302391648" /db_xref="GeneID:9512911" /translation="MRYKKTLIKEAIILFCLVIGAIYISFKNFLLFHVSIELFSIIIA FNIFVIAVNASEITENSNFIFLGLTYGFVGFFDLLHTLAYPGMDILAKGGIDLSAQLW IIARYIESFSLLGFVLFWYKDFKKSNKVIYIYILVTAILLLNIFYLHTFPACFIERIG LTSFKIISEYIVSGILLIGIILLVTNKQKLNSKIYWFMLGGLGTTIGSTISLTFYTNP YDFSIIVGHLLKLISFYFIYKAITKTSLQKPYQSLFYELNKTKKKLEQKQNKLLNVAK VLFVIVNTEGKVTSINQYGCEVLGYQEEEIIGKDWCDNFVAIEDKKRSREIGKKLVAE NLESVECIENNIITKEEEKRTIAWRNTILRDEVGNIKEVLGAGIDITDRKKLQEQLVR SEKLAELGKLASGICHEFNNQLAGMMGQIDILLLKNKQDKISLTADAIDRLKQIKSNG QQAKKIAYDLMNISKPKSESISAHDIKEIIDEILSIQQRKLEVENIEVIRKYSSVPKV KMNSDELKQIFLNLIINARDAMGPYNGGQLKISVQEVDNDEIEVEVSDTGIGMDEETK NQIFKPFFTTKADLIQDKFDQKGNGLGLSITAKIIEKYNGSIEVKSEKGTGTTFTIRI PTVNLST" misc_feature 937730..938065 /locus_tag="Acear_0869" /note="PAS domain S-box; Region: sensory_box; TIGR00229" /db_xref="CDD:161776" misc_feature 937730..937873 /locus_tag="Acear_0869" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature 938030..938785 /locus_tag="Acear_0869" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: COG3920" /db_xref="CDD:33706" misc_feature 938081..938290 /locus_tag="Acear_0869" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature order(938099..938101,938111..938113,938123..938125, 938132..938134,938144..938146,938153..938155, 938219..938221,938231..938233,938240..938242, 938252..938254,938261..938263,938273..938275) /locus_tag="Acear_0869" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature 938117..938119 /locus_tag="Acear_0869" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature 938438..938767 /locus_tag="Acear_0869" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(938456..938458,938468..938470,938477..938479, 938555..938557,938561..938563,938567..938569, 938573..938578,938666..938677,938723..938725, 938729..938731,938744..938749,938753..938755) /locus_tag="Acear_0869" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 938468..938470 /locus_tag="Acear_0869" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(938567..938569,938573..938575,938666..938668, 938672..938674) /locus_tag="Acear_0869" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene 938884..940671 /locus_tag="Acear_0870" /db_xref="GeneID:9512912" CDS 938884..940671 /locus_tag="Acear_0870" /note="COGs: COG2199 FOG: GGDEF domain; InterPro IPR003018:IPR000160; KEGG: hor:Hore_07420 multi-sensor signal transduction histidine kinase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; SPTR: B8CW30 Sensor protein; TIGRFAM: diguanylate cyclase; PFAM: GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain" /codon_start=1 /transl_table=11 /product="diguanylate cyclase with GAF sensor" /protein_id="YP_003827469.1" /db_xref="GI:302391649" /db_xref="GeneID:9512912" /translation="MGENHQYKSNSLIILVITCLVLSFISFKNYLLFHNIVELYSVII ACGIFIIAVNTSHLSSNSYLLFIGVSYGFIAFFDLFHTLSYKGMGVFFIRTANLPTQL WIIARYLEAISLLIAFKFINTDISTKKLYFSYFIFSLVLLSGVFWAEWFPNCYQPDSG LTIFKIYSEYVIIAILILNIMLLIKKRDKFHSQFYKYMMYSIGFTILSELLFTMYSDV QGLFNILGHIVKLISFYYIYKSVIQINLLDPYNALFRNINKKNKKMKQLNNTLLVITK VKGLIATEEDIETFFDKSLDVLLEKRDYAMAWIGKAIEEDKKVIPMAQAGMTKGYLDN ITITWDDKESSMGPTGRAIKERKHIIEKNNVNFASCQEEASRKNYVTSIALPIIHDDQ VYGALNIYSKSKNTFIKPEIDLLQDLARNIGFAINKLRNKEKIKYLSFHDQLTGLYNR MFFNKELERLNVKRNLPLSIVVTDLNGLKKVNDNYGHKMGDKLLIAFAKLLREYCRQD DIICRWGGDEFALLFPKTPSSKTKEIISRIKEKVNQTTCEGIQLSSAFGYAVKTNTED DIQQIFKQADNNMYQDKRQQKQSSDINNC" misc_feature 939724..940191 /locus_tag="Acear_0870" /note="FOG: GAF domain [Signal transduction mechanisms]; Region: FhlA; COG2203" /db_xref="CDD:32385" misc_feature 939739..940161 /locus_tag="Acear_0870" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" misc_feature 940201..940644 /locus_tag="Acear_0870" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(940303..940305,940432..940434) /locus_tag="Acear_0870" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(940318..940320,940327..940332,940342..940344, 940354..940356,940420..940422,940426..940437) /locus_tag="Acear_0870" /note="active site" /db_xref="CDD:143635" misc_feature order(940408..940410,940492..940494) /locus_tag="Acear_0870" /note="I-site; other site" /db_xref="CDD:143635" gene 940861..942978 /locus_tag="Acear_0871" /db_xref="GeneID:9512913" CDS 940861..942978 /locus_tag="Acear_0871" /note="COGs: COG2206 HD-GYP domain; InterProIPR003018:IPR013655:IPR006674:IPR000014:IPR 000700:IPR001610:IPR003607; KEGG: dth:DICTH_1580 response regulator; PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold-3 domain protein; GAF domain protein; SMART: metal-dependent phosphohydrolase HD region; PAS domain containing protein; GAF domain protein; PAC repeat-containing protein; SPTR: B5YAC5 Putative response regulator; TIGRFAM: PAS sensor protein; PFAM: HD domain; PAS fold; TIGRFAM: PAS domain S-box" /codon_start=1 /transl_table=11 /product="PAS/PAC sensor protein" /protein_id="YP_003827470.1" /db_xref="GI:302391650" /db_xref="GeneID:9512913" /translation="MNYLIWENEKLEIKTKKRKVPENTIEKWQNIVDIMVKKIGVTDA LITRVTPPYIEVFQASQNKENPFNRRDKVKLTGHYCEVVVKNRKKLLVSNALENDNWK DSIEVEKGMISYLGFPLKWPDGDIFGTICVHDTEENEFSKDAEELIKQFQELVESHLK ILYQKEQLDQQIEKEQKIKERLELVMDASEHGFWDWDLDTGEVYFSPRYYTMLGYKPG ELPMKTETWINLIHPNDRKKIILKIEEYIENAQPFEEEFRMKCKDCSYKWISGRIKSF EIDKEGNPHRAVGVHVDITKHKKDERKLRNQKEELKDQKEELQALNEQLTAYSEEVAT INQELNELNNRFINMINVISNLNEGSKSDEKGFLADLLHRAVNIIPEADYGKIYIVDE DGYCNFIDAIGHDIDILKKSKMREEIFFCDSGQSIYILDEYSLNIDKIPDGIKQNFIS ALKPVSQSIYINITVNDEVVGKIILDIAEDSNQEFSNNTKEILSSLATLASVFFSFQR YNKLQGQFTKDLITSIIQMLEIYDRYTSGHSENVAQIASKIAEEMGLSQRKITDAYWA GMVHDIGKLLIPLNILNKKGTLSDSEYELIKKHPYWGYKSLSKSESLSHIAKYVLHHH ERWDGEGYPDGLKDSEIPLISQILAVSDSWDAMTSDRAYREVLSKDEAIQEIRDNKRS QFSPRVVDAFINLLEGNLEFEVV" misc_feature 940936..941361 /locus_tag="Acear_0871" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" misc_feature 941434..941742 /locus_tag="Acear_0871" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature 941464..941733 /locus_tag="Acear_0871" /note="PAS fold; Region: PAS_3; pfam08447" /db_xref="CDD:117024" misc_feature order(941473..941475,941485..941487,941503..941505, 941548..941559,941635..941637,941650..941652) /locus_tag="Acear_0871" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature order(941539..941541,941551..941553,941575..941577, 941584..941589,941671..941673,941677..941679) /locus_tag="Acear_0871" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature 942457..942888 /locus_tag="Acear_0871" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature order(942472..942474,942568..942573,942814..942816) /locus_tag="Acear_0871" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature 942571..942573 /locus_tag="Acear_0871" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene 943247..944536 /locus_tag="Acear_0872" /db_xref="GeneID:9512914" CDS 943247..944536 /locus_tag="Acear_0872" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: cbi:CLJ_0076 transposase; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; SPTR: C3KS84 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003827471.1" /db_xref="GI:302391651" /db_xref="GeneID:9512914" /translation="MKLSFKFKPDFSHKQLEIVKELSWHCSKLYNITNYAIKNNKDIK PVYTRLENNFKDNWHTDYLHSHNRQQLFKQLVQDWKSYFNSIEDYNNNPSKYQGQPRP PKFKYLDNNPSEVIFTNLATRIREGNLLLSLSKEIKNRYQVDSLKFRLPTVIESLIDE DNLSMSKGHSVENSLQQVRIKQDNLTNQWYLLIIYKQQPKENSPGDNIMSIDLGLDNL ATLTFKDNTENYIINGKPLKSKNKYFNQEINRLQSIRMKQTGSKKFKDTKQIKKLRTK RRNYVFDYLHKASRKIVNLAKKHNVSKIVIGDLKEIKQGMDYNKSFVQVPIQRLKDLI EYKAKLEGIEVNIINEAYTSGCSAIDLEKLNKDNYNKSRRVERGLFQSNFGLTINADV NGSLNIMRKFLDKCIPELINRARDNGVVNPPKRLRVA" misc_feature 943247..944473 /locus_tag="Acear_0872" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature 943433..944185 /locus_tag="Acear_0872" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature 944075..944308 /locus_tag="Acear_0872" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature 944231..944449 /locus_tag="Acear_0872" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 944585..945469 /locus_tag="Acear_0873" /db_xref="GeneID:9512915" CDS 944585..945469 /locus_tag="Acear_0873" /note="COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: drt:Dret_1528 diguanylate cyclase; PFAM: GGDEF domain containing protein; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; SPTR: C1SRP2 Diguanylate cyclase (GGDEF) domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain" /codon_start=1 /transl_table=11 /product="diguanylate cyclase" /protein_id="YP_003827472.1" /db_xref="GI:302391652" /db_xref="GeneID:9512915" /translation="MCEVREASVACLGGGSLNISKKEINNKKIHEVFITDAEDLESTF LLKEGSYKEIHLKFCNSLLEKDNYIFVSYIFKLDNNYCLIGERKNVEDKEALEKISLL NNELANKTRKLTKKNKKLQQAKDEIEKLSKTDELTGLANRRHFMNYLQKIFSQAQRYS QSLSLVMIDLDKFKNINDTYGHDAGDKVLSALGDLLNNETRNEDLAARIGGEEFIVIL TQTDLNDARNYAERIRKKISKLNIESIPVKITASLGVATMKNNDDYESIFNRADEALY KAKNSGRDKVCKYKGYKL" misc_feature 944981..945445 /locus_tag="Acear_0873" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(945089..945091,945218..945220) /locus_tag="Acear_0873" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(945104..945106,945113..945118,945128..945130, 945140..945142,945206..945208,945212..945223) /locus_tag="Acear_0873" /note="active site" /db_xref="CDD:143635" misc_feature order(945194..945196,945278..945280) /locus_tag="Acear_0873" /note="I-site; other site" /db_xref="CDD:143635" gene 945696..947042 /locus_tag="Acear_0874" /db_xref="GeneID:9512916" CDS 945696..947042 /locus_tag="Acear_0874" /note="COGs: COG1151 6Fe-6S prismane cluster-containing protein; InterProIPR016100:IPR016099:IPR004137:IPR011254:IPR 010048; KEGG: bbe:BBR47_47240 probable hydroxylamine reductase; PFAM: Prismane; SPTR: C0ZKM4 Probable hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase" /codon_start=1 /transl_table=11 /product="hybrid cluster protein" /protein_id="YP_003827473.1" /db_xref="GI:302391653" /db_xref="GeneID:9512916" /translation="MFKRILSSHLKEEINMTEMNMFCNQCEQTPSGGCTKVGVCGKNE DIASLQDTVIYGLKGVAAYANHARELGYTDPEVNETIERGLYSTLTNVNFNLEENIEM AMEVGEATVKVMDLLDEAHTDEFGIPEPVEVPQNQAEGKAILVTGHNLHALKELLEQS EGKGINIYTHSEMLPAHGYPELNKYDHLKGNIGGSWTDQRELFEEFPGAILGTTNCVM PIRGGYADRFFSYDVTGLEDVTKIEDDDFTPVIEKALDLPEANMESDETLTTGFHHQN VLELAPNIVEAVKEGKISRFFVIAGCDSPGSGNEYYRELAKSVPEDCVILTTACGKFR FNDLDYGTVPGTEIPRFIDLGQCNNSISAVKIALALADAFDCEVNELPLSIVLSWFEQ KACAILLGLFNLGIQDIYLGATPPDFLTENVVGVLQDNFNLQLTGDSQEDLEKMLG" misc_feature 945747..947039 /locus_tag="Acear_0874" /note="hydroxylamine reductase; Provisional; Region: PRK12310" /db_xref="CDD:183427" misc_feature 945756..947036 /locus_tag="Acear_0874" /note="Hybrid cluster protein (HCP), formerly known as prismane, is thought to play a role in nitrogen metabolism but its specific function is unknown. HCP has three structural domains, an N-terminal alpha-helical domain, and two similar domains comprising a...; Region: HCP; cd01914" /db_xref="CDD:73287" misc_feature order(945762..945764,945771..945773,945795..945797, 945813..945815) /locus_tag="Acear_0874" /note="cubane metal cluster [ion binding]; other site" /db_xref="CDD:73287" misc_feature order(946137..946139,946209..946211,946341..946343, 946599..946601,946683..946685,946764..946766, 946866..946868) /locus_tag="Acear_0874" /note="hybrid metal cluster; other site" /db_xref="CDD:73287" gene complement(947167..948375) /locus_tag="Acear_0875" /db_xref="GeneID:9512917" CDS complement(947167..948375) /locus_tag="Acear_0875" /note="COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153; KEGG: amt:Amet_4404 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; SPTR: A6TWA9 Sodium/hydrogen exchanger; PFAM: Sodium/hydrogen exchanger family" /codon_start=1 /transl_table=11 /product="sodium/proton antiporter, CPA1 family (TC 2.A.36)" /protein_id="YP_003827474.1" /db_xref="GI:302391654" /db_xref="GeneID:9512917" /translation="MALSLAVIILLGLIFNRAFKKMKLPGLLGMLILGILIGPYGFNL ISEEILTISPDLRKIALIVILLRAGLGIEKETLKKVGVPAVKLSFIPSFLEGFTVLFV SMQLFGLSFIEGGILGFIIAAVSPAVVVPQMLNLIDNNRGADKGIPTLILTGASIDDV IAITIFSTFLGFYGGSQLNIAKKLLNVPISILMGVLLGIITGFILLYLFKKYHIRDTK KALLILSSAIILTGLKDLLKNIIPIAALLGVMAIGFILQERYNLVAKRLASKFNKIWV FAEIMLFVLVGAEVNIYLAINSGLIGLVIIFIGLIARGTGVLISVAGTELNWKERIFS VIAYSPKATVQAAIGAVPLSAGVESGELILAMAVLAIIITAPLGAAGIKLAGENWLSK PENNPEEAKL" misc_feature complement(947293..948258) /locus_tag="Acear_0875" /note="NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]; Region: NhaP; COG0025" /db_xref="CDD:30375" gene 948619..949317 /locus_tag="Acear_0876" /db_xref="GeneID:9512918" CDS 948619..949317 /locus_tag="Acear_0876" /note="COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: cce:Ccel_0596 alanine racemase domain protein; PFAM: alanine racemase domain protein; SPTR: B6FYW0 Putative uncharacterized protein; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family" /codon_start=1 /transl_table=11 /product="alanine racemase domain protein" /protein_id="YP_003827475.1" /db_xref="GI:302391655" /db_xref="GeneID:9512918" /translation="MSEIKDNLKQVQKRIAAAAKRAGRDSDEIKLVAVTKTRGIEEIK EVIEADVVDLGESRVQELRDKYDNISQKINWHMIGHLQRNKVKYIMRMERCNLIHSMD SMRLAKKINKRAGMADRVMNVLVQINVAGDENKFGLEPEETIDYLRKVAEFENLQVKG LMTMVPYVDDTEQVRPYFRELKELFEEVKRAEIPNIEMQELSMGITNDFEVAIEEGAT IVRVGSAIFGPREY" misc_feature 948628..949302 /locus_tag="Acear_0876" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins; Region: PLPDE_III_YBL036c_like; cd00635" /db_xref="CDD:143483" misc_feature order(948718..948720,948724..948726,948787..948789, 948850..948852,949108..949110,949231..949233, 949279..949281,949285..949290) /locus_tag="Acear_0876" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143483" misc_feature 948724..948726 /locus_tag="Acear_0876" /note="catalytic residue [active]" /db_xref="CDD:143483" gene 949350..950147 /locus_tag="Acear_0877" /db_xref="GeneID:9512919" CDS 949350..950147 /locus_tag="Acear_0877" /EC_number="1.5.1.2" /note="COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR000304:IPR004455:IPR016040; KEGG: pmx:PERMA_0589 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: C0QUL3 Pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase" /protein_id="YP_003827476.1" /db_xref="GI:302391656" /db_xref="GeneID:9512919" /translation="MNKIGIIGAGSMAEALINGLINENQVDKEAVIASDISDQRREVM TDKYGIEIVADNHKVVTESDYIFLAVKPQVIGDVIEEVADLFTTEQKVISIAAGVSTE QLEEMISAKVPVVRIMPNTPALVQEGVLAYSLGRQATEEFGRELEDLLSPVGKVIKVK EALMPAVTGLSGSGPAYVALILEALVAGGVKLGLSHSDSKDLAIQTLAGTAKLAAESD EHLAVLRDQVTSPGGTTAEALYRLEKSGIRSGLIEAVAASAEKAQEL" misc_feature 949350..950144 /locus_tag="Acear_0877" /note="pyrroline-5-carboxylate reductase; Reviewed; Region: PRK11880" /db_xref="CDD:183357" misc_feature 949353..950144 /locus_tag="Acear_0877" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene 950171..950455 /locus_tag="Acear_0878" /db_xref="GeneID:9512920" CDS 950171..950455 /locus_tag="Acear_0878" /note="InterPro IPR003425; KEGG: sat:SYN_00106 hypothetical protein; PFAM: protein of unknown function YGGT; SPTR: Q2LU56 Hypothetical membrane protein; PFAM: YGGT family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827477.1" /db_xref="GI:302391657" /db_xref="GeneID:9512920" /translation="MYALIRLIDLSFTIYTWILIARVISSWVSPPMHNSNVRKIMKFI YEVTEPVLAPIRRMLPTGNIGIDLSPLIAFIAINIIHNSLLRILRRLLLY" misc_feature 950192..950410 /locus_tag="Acear_0878" /note="YGGT family; Region: YGGT; cl00508" /db_xref="CDD:193846" gene 950484..951278 /locus_tag="Acear_0879" /db_xref="GeneID:9512921" CDS 950484..951278 /locus_tag="Acear_0879" /note="COGs: COG2302 conserved hypothetical protein contains S4-like domain; InterPro IPR002942; KEGG: hor:Hore_09250 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: B8CWL2 RNA-binding S4 domain protein; PFAM: S4 domain" /codon_start=1 /transl_table=11 /product="RNA-binding S4 domain protein" /protein_id="YP_003827478.1" /db_xref="GI:302391658" /db_xref="GeneID:9512921" /translation="MFNREKFLRYIKAKDEEEELTAAKVLDKAREALQKHEPTFTNFL NPYQRELLTSILDQIYDLKYLLYGGFERAERKRIGLMPDYYMREIVDNPLTIFEISGN FNFASVSHRDFLGAILGTGIKREVVGDLIVSSDKCQVIVAEEIKDYLLFNLKRVHNVP VEVEEIDAEKLEVEPEHVKEIKSTVASLRLDSVASSGFSTSRTKMAREIEAGNVKLNW KIEDDPAQTVELDDIISIRGRGRVEIDQHLGRSRKDRIKLILKRYT" misc_feature 950523..951272 /locus_tag="Acear_0879" /note="Uncharacterized conserved protein, contains S4-like domain [Function unknown]; Region: COG2302" /db_xref="CDD:32457" misc_feature 951045..951215 /locus_tag="Acear_0879" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cl09940" /db_xref="CDD:186878" gene 951303..951980 /locus_tag="Acear_0880" /db_xref="GeneID:9512922" CDS 951303..951980 /locus_tag="Acear_0880" /note="InterPro IPR007793:IPR019933; KEGG: ctc:CTC01621 minicell-associated protein; PFAM: DivIVA family protein; SPTR: Q894C8 Minicell-associated protein; TIGRFAM: DivIVA domain; PFAM: DivIVA protein; TIGRFAM: DivIVA domain" /codon_start=1 /transl_table=11 /product="DivIVA domain protein" /protein_id="YP_003827479.1" /db_xref="GI:302391659" /db_xref="GeneID:9512922" /translation="MDELLTPLDIYNKEFNKTFSVWAYNTKEVEEFLDLVAECYEEIY LENEELRDRIADLEERLQEYKEREETLNKTIDTVKETADKQQRTAEQRAESIIENAKQ KAANIKERAKTQAELIIDKAEMKTEKMVNQTNEQLEEERRKYKNLVESKELFEAKFKS LLKTYLVMLNESDGLEELELEQLDNLEKQNIEELKDKFNSDISDELSTIKFSQDKVAA IEKDKTE" misc_feature 951315..951779 /locus_tag="Acear_0880" /note="DivIVA protein; Region: DivIVA; pfam05103" /db_xref="CDD:147333" misc_feature 951315..951413 /locus_tag="Acear_0880" /note="DivIVA domain; Region: DivI1A_domain; TIGR03544" /db_xref="CDD:163317" misc_feature <951540..>951725 /locus_tag="Acear_0880" /note="ATP synthase B/B' CF(0); Region: ATP-synt_B; cl07975" /db_xref="CDD:195650" gene 951993..952238 /locus_tag="Acear_0881" /db_xref="GeneID:9512923" CDS 951993..952238 /locus_tag="Acear_0881" /note="KEGG: tpd:Teth39_0873 hypothetical protein; SPTR: B0K8R6 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827480.1" /db_xref="GI:302391660" /db_xref="GeneID:9512923" /translation="MEDRIAVVGILIEDREGIAQQVNKVLGEFGNIIVGRMGIPYREK EVSVISLIVNGTTDQLSAMSGQLGNLEGVKVKSAVTA" misc_feature 952002..952232 /locus_tag="Acear_0881" /note="putative iron-only hydrogenase system regulator; Region: hyd_TM1266; TIGR03959" /db_xref="CDD:188474" gene 952264..952968 /locus_tag="Acear_0882" /db_xref="GeneID:9512924" CDS 952264..952968 /locus_tag="Acear_0882" /EC_number="3.2.2.9" /note="COGs: COG0775 Nucleoside phosphorylase; InterPro IPR000845:IPR010049; KEGG: bbe:BBR47_41630 probable MTA/SAH nucleosidase; PFAM: purine or other phosphorylase family 1; PRIAM: adenosylhomocysteine nucleosidase; SPTR: C0ZHL6 Probable MTA/SAH nucleosidase; TIGRFAM: MTA/SAH nucleosidase; PFAM: phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase" /codon_start=1 /transl_table=11 /product="MTA/SAH nucleosidase" /protein_id="YP_003827481.1" /db_xref="GI:302391661" /db_xref="GeneID:9512924" /translation="MIGIIGAMDVEIKLLKSDLDLKEKKERAQMVFYQGELKGKDVVL VKSGIGKVNAAVCTQILVDDFSVDKVIFTGVAGAVDEELDVGDIVISTDTIQHDVNST AMGYELGEIAEMNKVRFEADQDLIAIAKDAGEKLIEDGAGIEVVAGRVLSGDEFIADD EKVEWLKEVFNGYCAEMEGAAVGQACFLNDIPFVIIRSMSDKADGSAEVDYSAFMKKA ANRSYRIVEEMLEHLK" misc_feature 952264..952965 /locus_tag="Acear_0882" /note="Phosphorylase superfamily; Region: PNP_UDP_1; cl00303" /db_xref="CDD:193757" gene 953344..956127 /locus_tag="Acear_0883" /db_xref="GeneID:9512925" CDS 953344..956127 /locus_tag="Acear_0883" /EC_number="6.1.1.5" /note="COGs: COG0060 isoleucyl-tRNA synthetase; InterProIPR001412:IPR015905:IPR014729:IPR002300:IPR 013155:IPR010663:IPR009080:IPR009008:IPR002301; KEGG: hor:Hore_09270 isoleucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; zinc finger Fpg domain protein; SPTR: B8CWL4 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="isoleucyl-tRNA synthetase" /protein_id="YP_003827482.1" /db_xref="GI:302391662" /db_xref="GeneID:9512925" /translation="MDYKETLNLPETEFQMRANLSEREEEFQEYWEENEIYDEALKNR EGAEKFILHDGPPYANGDIHIGHALNQVLKDILTRYKTLQGYQSPYIPGWDTHGLPIE HQITKELGDKIEELSTAELREECKNYALKYIDRQREQFKRLGAWGEWDNPYVTLDPEY EAKQIEVFGEIIKNGYLSKGMKPVYWCPHCNTALAEAEVEYEEARAPSIYVKFPVQEG ITVGDTELTAEDSYVVIWTTTPWTIPSNMAITVHPDFDYVVAEAEGDLLVVAKELVDE MMEIVGIDEYEIVEEIEGDALEGLVTTHPFFDRESPIIFGDHVTLEQGTGCVHTAPGH GHEDYVIGVEYDLPVFAPMDNDGVFTEEAGPFAGMYYDDANIKVTDMLEDDDLLMNLD FIDHSYPNCWRCKNPIIFRATEQWFASVDAIKDDALETIKDVDWYPEWGEERMANMIE DRSDWCISRQKSWGVPIPIFYCQDCGADIATDETIKAVKELFAEEGSNAWFEKTAEEI LPAGFECPECGEIEFEKESDIMDVWFDSGSSHASVLEIREELERPADIYLEGTDQYRG WFNSSLLTSIAYKGEAPYKGVVTNGFTVDANGKKMSKSQGNVVSPHEVIDQYGADILR LWVASSDFKEDVRVSDKILQQNAEVYRRIRNTFRYILGNMDNFDPVENTVEYDELLEI DKWALHKLQKLVDEITEAYEEYDYHKLYHKVHNFCATEMSSFYMDVLKDRLYTSVTDS TKRRAAQTAMYEILTTLIKVLSPVLVHTAEEAWQHLPESGKEAESVFLTDWPEVKEDY INEELEAKWDRLLTIREDVSKALELARNEDIVGHSLDAGIEIYASEEVNDFLKQFDNL ADLFIVSKVELAAKENADVTTYTGEETDIEVVVEAAPGEKCDRCWKYRTSVGDNEDHP EICAECLEVVNQL" misc_feature 953344..956118 /locus_tag="Acear_0883" /note="isoleucyl-tRNA synthetase; Reviewed; Region: ileS; PRK05743" /db_xref="CDD:180231" misc_feature 953485..>953901 /locus_tag="Acear_0883" /note="catalytic core domain of isoleucyl-tRNA synthetases; Region: IleRS_core; cd00818" /db_xref="CDD:173909" misc_feature 953533..953544 /locus_tag="Acear_0883" /note="HIGH motif; other site" /db_xref="CDD:173909" misc_feature <954562..955257 /locus_tag="Acear_0883" /note="catalytic core domain of isoleucyl-tRNA synthetases; Region: IleRS_core; cd00818" /db_xref="CDD:173909" misc_feature order(954673..954675,954940..954942,954949..954951, 955018..955032,955036..955038,955042..955044, 955111..955125,955135..955152,955246..955248) /locus_tag="Acear_0883" /note="active site" /db_xref="CDD:173909" misc_feature 955141..955155 /locus_tag="Acear_0883" /note="KMSKS motif; other site" /db_xref="CDD:173909" misc_feature 955255..955794 /locus_tag="Acear_0883" /note="Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases; Region: Anticodon_Ia_Ile_BEm; cd07960" /db_xref="CDD:153414" misc_feature order(955264..955266,955276..955278,955285..955287, 955297..955299,955306..955308,955315..955320, 955462..955464,955471..955476,955483..955488, 955495..955497,955510..955512,955522..955524, 955531..955533,955786..955788) /locus_tag="Acear_0883" /note="tRNA binding surface [nucleotide binding]; other site" /db_xref="CDD:153414" misc_feature order(955306..955308,955315..955317) /locus_tag="Acear_0883" /note="anticodon binding site; other site" /db_xref="CDD:153414" misc_feature 956023..956112 /locus_tag="Acear_0883" /note="Zinc finger found in FPG and IleRS; Region: zf-FPG_IleRS; pfam06827" /db_xref="CDD:148438" gene complement(956175..956435) /locus_tag="Acear_0884" /db_xref="GeneID:9512926" CDS complement(956175..956435) /locus_tag="Acear_0884" /note="KEGG: aoe:Clos_1961 hypothetical protein; SPTR: A8MI67 Putative uncharacterized protein; PFAM: protein of unknown function (DUF3343)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827483.1" /db_xref="GI:302391663" /db_xref="GeneID:9512926" /translation="MKDTFCVITFHSTHLALEFERVVKKEEIKAKSIPVPRQISSSCG IAGRFEEEKLEEIKDICRKYDIDFEQIYRVYQDKTKEPEELA" misc_feature complement(956214..956429) /locus_tag="Acear_0884" /note="Protein of unknown function (DUF3343); Region: DUF3343; pfam11823" /db_xref="CDD:152259" gene complement(956442..956660) /locus_tag="Acear_0885" /db_xref="GeneID:9512927" CDS complement(956442..956660) /locus_tag="Acear_0885" /note="InterPro IPR001455; KEGG: tte:TTE1883 transcriptional regulator; PFAM: SirA family protein; SPTR: Q8R5R2 Predicted transcriptional regulator; PFAM: SirA-like protein" /codon_start=1 /transl_table=11 /product="SirA family protein" /protein_id="YP_003827484.1" /db_xref="GI:302391664" /db_xref="GeneID:9512927" /translation="MANKEVDTRGRSCPEPVIMTKQAIQEISEGEITVLINEEVAKEN VSRMARNSGCSVEVEDSEDGYRLLITKR" misc_feature complement(956448..956648) /locus_tag="Acear_0885" /note="SirA_like_N, a protein of unknown function with an N-terminal SirA-like domain. The SirA, YedF, YeeD protein family is present in bacteria as well as archaea. SirA (also known as UvrY, and YhhP) belongs to a family of a two-component response...; Region: SirA_like_N; cd03421" /db_xref="CDD:48207" misc_feature complement(order(956607..956609,956613..956624, 956631..956633,956640..956645)) /locus_tag="Acear_0885" /note="CPxP motif; other site" /db_xref="CDD:48207" gene complement(956650..957729) /locus_tag="Acear_0886" /db_xref="GeneID:9512928" CDS complement(956650..957729) /locus_tag="Acear_0886" /note="KEGG: aoe:Clos_1963 hypothetical protein; SPTR: A8MI69 Putative uncharacterized protein; PFAM: YeeE/YedE family (DUF395); TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827485.1" /db_xref="GI:302391665" /db_xref="GeneID:9512928" /translation="MNNRKGIIFTGAVIGVLAGLLVKFGNPVNMGICVACFIRDIAGG MGLHRAGVVQYIRPEIIGFILGAFIISLVTKEFDAKGGSSPFMRFVLAMFVMIGALVF LGCPLRMVLRLAGGDLNAIIGILGFAAGIIIGAQFIKKGFTLGRAYQQNQTNGYILPI VALILLVFVITKPSFILFSSKGPGAMYAPIMISLLAGLIIGGLAQRSRICMVGGIRDL YLIKDPHLIIGFISVFVFTLLVNLGFGNFQLGFVGQPAAHTDGLWNFLGMLLTGFGSV LLGGCPLRQTILAGEGNIDSAITFMGYLFGAAIAHNFGLAATPKGVSINGKIAVIVGI IIVAGIGFSKAKNFTLTKGGISHGQ" misc_feature complement(956803..>957117) /locus_tag="Acear_0886" /note="putative inner membrane protein; Provisional; Region: PRK11099" /db_xref="CDD:182961" gene 958085..959242 /locus_tag="Acear_0887" /db_xref="GeneID:9512929" CDS 958085..959242 /locus_tag="Acear_0887" /note="COGs: COG0520 Selenocysteine lyase; InterProIPR020578:IPR015421:IPR000192:IPR015424:IPR 010969; KEGG: cbi:CLJ_B3972 cysteine desulfurase family protein; PFAM: aminotransferase class V; SPTR: C3KWI5 cysteine desulfurase family protein; TIGRFAM: cysteine desulfurase family protein; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein" /codon_start=1 /transl_table=11 /product="cysteine desulfurase family protein" /protein_id="YP_003827486.1" /db_xref="GI:302391666" /db_xref="GeneID:9512929" /translation="MKEVYLDNAATSRVKPDNVLEAMNNYLTNIGCSPGRGGYECSLQ ASRIVLNTRLAFADFFNVNSSEQIIFSHNITHGLNYALKGLLSEGDHVITTSIEHNAV VRPLKGLEEAGIIEVDYISCDEAGILDPEDVEKAVCDNTKLLVTTHASNIIGTLTPVQ QLGKIADKHGLYFILDTAQTAGIYDLDFADLKLDVLAFTGHKGLLGPTGTGGLAVSKE VAQEMEPLIEGGTGSISDKEYQPDFLPDKFESGTMNTVGLAGLKAGIEFIKEQGLKKI REHELELTDRLLQGLDAIEGIKIYGPKDTKLQTSTVSIDVADFDLGQLSFRLDDEYGI MTRSGLHCAPLAHKTIGSFPEGTLRFSIGYFNTAEEIDYTLETLEELMRTN" misc_feature 958094..959233 /locus_tag="Acear_0887" /note="Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]; Region: csdA; COG0520" /db_xref="CDD:30866" misc_feature 958094..959218 /locus_tag="Acear_0887" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl00321" /db_xref="CDD:193768" misc_feature order(958304..958309,958316..958318,958526..958528, 958610..958612,958619..958621,958679..958681, 958688..958690) /locus_tag="Acear_0887" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99742" misc_feature 958688..958690 /locus_tag="Acear_0887" /note="catalytic residue [active]" /db_xref="CDD:99742" gene 959809..960138 /locus_tag="Acear_0888" /db_xref="GeneID:9512930" CDS 959809..960138 /locus_tag="Acear_0888" /note="KEGG: hor:Hore_09290 hypothetical protein; SPTR: B8CWL6 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827487.1" /db_xref="GI:302391667" /db_xref="GeneID:9512930" /translation="MSNKQWEEDDEVEEELDKETIIELKESLMKLIGDFHKMGVAEYI EMVRSPKRMLYVNFLAGLARGLGVVVGATLLGAIFLSILFKMADLNLPLIGEYIARLV RIVKQNL" gene 960207..960920 /locus_tag="Acear_0889" /db_xref="GeneID:9512931" CDS 960207..960920 /locus_tag="Acear_0889" /note="COGs: COG1734 DnaK suppressor protein; InterPro IPR020458:IPR000962:IPR014240; KEGG: hor:Hore_09300 transcriptional regulator, TraR/DksA family; SPTR: B8CWL7 transcriptional regulator, TraR/DksA family; TIGRFAM: sporulation protein, yteA family; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: sporulation protein, yteA family; RNA polymerase-binding protein DksA" /codon_start=1 /transl_table=11 /product="TraR/DksA family transcriptional regulator" /protein_id="YP_003827488.1" /db_xref="GI:302391668" /db_xref="GeneID:9512931" /translation="MTEYNEEYYREKLLQERERIIEQIESFDDKNYTGLHHSLKDSTS ELSTYDNHPSDQAPNTFEREKDLGLKDNAYRLLQKIDDALERIETGDYGICDICQEEI NRERLDFIPYTTRCVECNRAQAEEEEETTNRPVAEDPLGHPFGRTFNDDTESISFDGE DSWQSVAQYGTVNTPSDISEAVKQAEAYIDADENQGSVEWGDRVTDQGFTTGDEEYND ENLLSEQPTVDGEVEDSEE" misc_feature 960318..960713 /locus_tag="Acear_0889" /note="Prokaryotic dksA/traR C4-type zinc finger; Region: zf-dskA_traR; cl00755" /db_xref="CDD:193930" gene 961017..961460 /locus_tag="Acear_0890" /db_xref="GeneID:9512932" CDS 961017..961460 /locus_tag="Acear_0890" /EC_number="3.4.23.36" /note="COGs: COG0597 Lipoprotein signal peptidase; InterPro IPR001872; KEGG: hor:Hore_09320 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; SPTR: B8CWL9 Lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase" /codon_start=1 /transl_table=11 /product="lipoprotein signal peptidase" /protein_id="YP_003827489.1" /db_xref="GI:302391669" /db_xref="GeneID:9512932" /translation="MIAAFIIVVVVIILDQASKLVIVQNFSLHESIPIIEDIFYLTYV RNYGAAFGLLNNQRLFFIIITLVIILGLLFFYKQAQKEGIILQIAWGLGLGGAAGNLI DRVRLGYVIDFLDFRVWPVFNLADSAIVIAVSLFFYWAIILDGLE" misc_feature 961017..961433 /locus_tag="Acear_0890" /note="lipoprotein signal peptidase; Provisional; Region: PRK14787" /db_xref="CDD:173248" misc_feature 961056..961448 /locus_tag="Acear_0890" /note="Signal peptidase (SPase) II; Region: Peptidase_A8; cl00458" /db_xref="CDD:187899" gene 961466..962392 /locus_tag="Acear_0891" /db_xref="GeneID:9512933" CDS 961466..962392 /locus_tag="Acear_0891" /EC_number="5.4.99.-" /note="COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterProIPR006224:IPR002942:IPR006145:IPR020103:IPR 006225; KEGG: hor:Hore_09330 ribosomal large subunit pseudouridine synthase D; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: B8CWM0 Pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family" /codon_start=1 /transl_table=11 /product="ribosomal large subunit pseudouridine synthase D" /protein_id="YP_003827490.1" /db_xref="GI:302391670" /db_xref="GeneID:9512933" /translation="MSEEREYIIDDNDVDQRLDKFLAYQNEELSRSYIQKLIDNGEVT VNKEEKKNSYRLQVGDEVKLIIPQPEEVEIKPESIPLEVIAEDEDIVVINKQADLVVH PAPGHKQGTLVNALLYHCDNLSGINGEIRPGIVHRLDKDTSGAIVAAKNDQAHRNLVK QFKERRTEKIYLALVEGNIKHNKAKIDAAIGRDPYNRKRMAVTKRNSKQAVTRFEVLE RFGNYTWVKLKLETGRTHQIRVHMSYIDNPVVGDRLYGYNKQQLNVHRQLLHAYQLGF NHPRRNKWVEFTAEMPSDIKQILEKLRSEKNR" misc_feature 961508..962374 /locus_tag="Acear_0891" /note="pseudouridine synthase, RluA family; Region: rluA_subfam; TIGR00005" /db_xref="CDD:161659" misc_feature 961511..961747 /locus_tag="Acear_0891" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cd00165" /db_xref="CDD:29105" misc_feature order(961514..961516,961550..961555,961559..961564, 961568..961573,961580..961585,961589..961591, 961607..961630,961634..961636) /locus_tag="Acear_0891" /note="RNA binding surface [nucleotide binding]; other site" /db_xref="CDD:29105" misc_feature 961733..962293 /locus_tag="Acear_0891" /note="PseudoU_synth_RsuA/RluD: Pseudouridine synthase, RsuA/RluD family. This group is comprised of eukaryotic, bacterial and archeal proteins similar to eight site specific Escherichia coli pseudouridine synthases: RsuA, RluA, RluB, RluC, RluD, RluE, RluF...; Region: PseudoU_synth_RluCD_like; cd02869" /db_xref="CDD:30029" misc_feature order(961871..961882,962180..962182) /locus_tag="Acear_0891" /note="active site" /db_xref="CDD:30029" gene complement(962430..962633) /locus_tag="Acear_0892" /db_xref="GeneID:9512934" CDS complement(962430..962633) /locus_tag="Acear_0892" /note="InterPro IPR017900:IPR001080:IPR001450:IPR017896; KEGG: dau:Daud_1080 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B1I3N2 4Fe-4S ferredoxin, iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003827491.1" /db_xref="GI:302391671" /db_xref="GeneID:9512934" /translation="MPTDTIVLEVDPELCISCGLCIEECPAVFDWGDDDKAVAIVDTI PEKVQGDAIAAQEGCPTDAIKDA" misc_feature complement(962439..962618) /locus_tag="Acear_0892" /note="Ferredoxin [Energy production and conversion]; Region: Fer; COG1141" /db_xref="CDD:31336" gene 962928..963473 /locus_tag="Acear_0893" /db_xref="GeneID:9512935" CDS 962928..963473 /locus_tag="Acear_0893" /EC_number="2.4.2.9" /note="COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: hor:Hore_09350 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: uracil phosphoribosyltransferase; SPTR: B8CWM2 uracil phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain" /codon_start=1 /transl_table=11 /product="uracil phosphoribosyltransferase" /protein_id="YP_003827492.1" /db_xref="GI:302391672" /db_xref="GeneID:9512935" /translation="MLEYKKDILDQEGIQRALTRIAHEILEKNKGLDDLAVIGIRTRG VPLAERIAEKITEIEGEEVPVGILDITLYRDDLTTVAQQPIVHQTEIPFDITDKKVVL VDDVLYTGRTVRASLDALIDLGRPRAIQLAILIDRGHRELPIRADFVGKNLPTSQEEV VEVKLKEVDDAEEVILMEYQK" misc_feature 962940..963395 /locus_tag="Acear_0893" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene 963633..964913 /locus_tag="Acear_0894" /db_xref="GeneID:9512936" CDS 963633..964913 /locus_tag="Acear_0894" /note="COGs: COG2233 xanthine/uracil permease; InterPro IPR006042:IPR006043; KEGG: hor:Hore_09360 uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; SPTR: B8CWM3 uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; PFAM: Permease family; TIGRFAM: uracil-xanthine permease" /codon_start=1 /transl_table=11 /product="uracil-xanthine permease" /protein_id="YP_003827493.1" /db_xref="GI:302391673" /db_xref="GeneID:9512936" /translation="MEKESLRAEKLALPQKVILGIQHMFAMFGATVLVPKLTGLNPSV ALFTSAVGTIIFHFITKGKVPAYLGSSFAFIAPIIAAKESFGIPGAMLGCLTAGLIYI IMSAVIKAVGSDFLEKFLPPVVVGPVIMTIGLGLAPTAKDMATAHLPTAIFTLAVAIV ISIFGKGLIKVIPILIGVVSGYIFAYLAGIVDLAPVQEAAWLALPNFSLPSISEFSAS LPAVLIIAPIAVVTMVEHLGDVLALSKTVDREFIEEPGLHRTLLGDGIATAFAALLGG PPNTTYGENIGVLAITKVHNPVVIEIAAVFVFGMSFVQKLGALIRTIPAAVMGGIVIL LFGMIASIGLRTLIENEVDLSNNRNLVIVSTVLVIGISNLAFTIPGLGTDLKGMGLAA IVGIGLNILLPESAEAESDTEANEVQAEEAVQKA" misc_feature 963657..964835 /locus_tag="Acear_0894" /note="Sulfate transporter family; Region: Sulfate_transp; cl00967" /db_xref="CDD:193990" misc_feature 963672..964748 /locus_tag="Acear_0894" /note="Permease family; Region: Xan_ur_permease; pfam00860" /db_xref="CDD:189745" gene 964950..965891 /locus_tag="Acear_0895" /db_xref="GeneID:9512937" CDS 964950..965891 /locus_tag="Acear_0895" /EC_number="2.1.3.2" /note="COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR006130:IPR002082:IPR006132:IPR006131; KEGG: hor:Hore_09370 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; PRIAM: Aspartate carbamoyltransferase; SPTR: B8CWM4 Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase" /codon_start=1 /transl_table=11 /product="aspartate carbamoyltransferase" /protein_id="YP_003827494.1" /db_xref="GI:302391674" /db_xref="GeneID:9512937" /translation="MSFKHKHLLDLMDLSREEIQLILDTAESMKEIFTRSIKKVPTLR GKTIISLFYEPSTRTKSSFDLAGKRLSADMMSLSVSTSSVVKGESLVDTAKTMEAMGA DAVIMRHSMPGAPHLLAESIDASVLNAGDGAHAHPTQALLDMYSIREERGKIAGETIA IVGDIKHSRVARSNIWALNKLGAKVRVVGPPTLIPANLEEMDVEVYYDLEEGLEGIDV VNILRIQLERQEAGYLPNLREYTKFYGVDEKILELVGDEVTVMHPGPTNRGVEITPEV AYGDQSVINEQVTNGVAIRMALLYLLTGGEKIEETAN" misc_feature 964950..965870 /locus_tag="Acear_0895" /note="aspartate carbamoyltransferase catalytic subunit; Provisional; Region: pyrB; PRK00856" /db_xref="CDD:179144" misc_feature 964965..965399 /locus_tag="Acear_0895" /note="Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Region: OTCace_N; pfam02729" /db_xref="CDD:190401" misc_feature 965412..965855 /locus_tag="Acear_0895" /note="Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Region: OTCace; pfam00185" /db_xref="CDD:189438" gene 965872..967161 /locus_tag="Acear_0896" /db_xref="GeneID:9512938" CDS 965872..967161 /locus_tag="Acear_0896" /EC_number="3.5.2.3" /note="COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR002195:IPR006680:IPR011059:IPR004722; KEGG: dae:Dtox_2354 dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; SPTR: C1T9C1 Dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type" /codon_start=1 /transl_table=11 /product="dihydroorotase" /protein_id="YP_003827495.1" /db_xref="GI:302391675" /db_xref="GeneID:9512938" /translation="MKRLLIKNGKVVSPADGLNEELDILVAEGRIEKIGSGLEDKEAE VIDAIGKVVTPGLIDMHVHLREPGFEHKETIKTGTEAAAAGGFTSVACMPNTNPVIDN SSIVDSVIKKAEFEGKVNLFPIGSITKGLEGEELSEIGSMKEAGIVGISDDGETVMNS ELMRLALEYVTAFDLPVISHAEDQVLSGDGVVNEGYYSTVTGLDPIPAAAEDIIVARD IRLAELTGAPLHIAHVSTKRAVELVRDAKERGLEVTAEATPHHFTLTDEAVISFDTNT KVNPPLRSEEDVAAIKEGLADGTIDVIATDHAPHAFEEKNVEYDDAPFGISGLETALP LVITELVKPGIISLEEAVEKLTSNPAEVLNSDVGRLKEGSRADITVLDLDEEYEVDVD KFYSKGKNSPFDGFRLSGRPKVTIVDGKVVMKDNKVL" misc_feature 965875..967146 /locus_tag="Acear_0896" /note="dihydroorotase; Validated; Region: pyrC; PRK09357" /db_xref="CDD:181796" misc_feature 965881..>966060 /locus_tag="Acear_0896" /note="Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have...; Region: metallo-dependent_hydrolases; cl00281" /db_xref="CDD:193747" misc_feature 965995..967116 /locus_tag="Acear_0896" /note="Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C...; Region: DHOase_IIa; cd01317" /db_xref="CDD:30060" misc_feature order(966052..966054,966058..966060,966409..966411, 966568..966570,966787..966789) /locus_tag="Acear_0896" /note="active site" /db_xref="CDD:30060" gene 967175..968131 /locus_tag="Acear_0897" /db_xref="GeneID:9512939" CDS 967175..968131 /locus_tag="Acear_0897" /EC_number="4.1.1.23" /note="COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterProIPR018089:IPR013785:IPR001754:IPR011060:IPR 011995; KEGG: amt:Amet_4212 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: A8SXZ1 Putative uncharacterized protein; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2" /codon_start=1 /transl_table=11 /product="orotidine 5'-phosphate decarboxylase" /protein_id="YP_003827496.1" /db_xref="GI:302391676" /db_xref="GeneID:9512939" /translation="MSNFTTRLKAKIEEKKSFVCVGLDPRLNRIPEQIKEEIVAEYGK TKEAVGKIFLEFNQGIIDAVADYAAAVKPQIAFYEQYGHQGIKAYEETIEYAKKKDLL VIGDAKRNDIGSTAKAYADGHLGEVDFWEEAEVGYGADALTVNGYLGSDGIDPFVEAC NQQGKGIFVLVRTSNPSAGELQDLEADNKRIYEVMAELVNDWGEDIKDEDGFSAVGAV IGATYPEEAEELREIMGNAYFLVPGYGAQGAGAKEVVPSFKDGGYGAIVNSARGIIFA YQREPWKDRFSADEYQEAAQAAVEYMREDINTALNEAGKLPW" misc_feature 967229..968005 /locus_tag="Acear_0897" /note="Orotidine 5'-phosphate decarboxylase (ODCase) is a dimeric enzyme that decarboxylates orotidine 5'-monophosphate (OMP) to form uridine 5'-phosphate (UMP), an essential step in the pyrimidine biosynthetic pathway. In mammals, UMP synthase contains two...; Region: OMP_decarboxylase_like; cd04725" /db_xref="CDD:73387" misc_feature order(967238..967240,967244..967246,967388..967390, 967394..967396,967490..967492,967496..967498, 967691..967696,967898..967900,967982..967987) /locus_tag="Acear_0897" /note="active site" /db_xref="CDD:73387" misc_feature order(967394..967396,967400..967405,967493..967498, 967502..967507,967514..967519,967526..967531, 967607..967615,967646..967648,967691..967693, 967745..967747,967985..967987) /locus_tag="Acear_0897" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73387" gene 968157..969239 /locus_tag="Acear_0898" /db_xref="GeneID:9512940" CDS 968157..969239 /locus_tag="Acear_0898" /EC_number="6.3.5.5" /note="COGs: COG0505 Carbamoylphosphate synthase small subunit; InterProIPR001317:IPR011702:IPR006220:IPR002474:IPR 000991:IPR017926:IPR006274; KEGG: drm:Dred_1683 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; SPTR: A4J557 Carbamoyl-phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthase small subunit" /protein_id="YP_003827497.1" /db_xref="GI:302391677" /db_xref="GeneID:9512940" /translation="MEAKLVLEDGTIFTGKAFGAVEEGAEGEIVFNTSMTGYQEILTD ASYKGEIVTMTYPLIGNYGINEDDIESYTSHVNGFIVKEFCAQPSNWRALDKLENYLK EHGIMGISDIDTRALTKKLRIHGTMKGIITTNEADREELIGQAKEAPGLSGRDLVSKV TTDETYRLDGDDYRVVLMDFGAKKNIGRSLREEGCEVIVVPADTSAEGVMEYEPDGIM LSNGPGDPQDVPYAVETVKELIGKKPIFGICLGHQILGLAFGGDTYKLKFGHRGANHP VQDLRTKRVYITSQNHGFAVEAESLDSAEVEITHRNLNDDTVEGMKHRKYPVFSVQYH PEASPGPEDSHYLFTEFIELIASETA" misc_feature 968157..969221 /locus_tag="Acear_0898" /note="carbamoyl phosphate synthase small subunit; Reviewed; Region: PRK12564" /db_xref="CDD:183597" misc_feature 968157..968552 /locus_tag="Acear_0898" /note="Carbamoyl-phosphate synthase small chain, CPSase domain; Region: CPSase_sm_chain; pfam00988" /db_xref="CDD:144543" misc_feature 968679..969212 /locus_tag="Acear_0898" /note="Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II; Region: GATase1_CPSase; cd01744" /db_xref="CDD:153215" misc_feature order(968901..968903,969156..969158,969162..969164) /locus_tag="Acear_0898" /note="catalytic site [active]" /db_xref="CDD:153215" misc_feature order(968976..968978,968982..968984,969003..969005, 969009..969011,969093..969095,969171..969176, 969180..969185) /locus_tag="Acear_0898" /note="subunit interface [polypeptide binding]; other site" /db_xref="CDD:153215" gene 969270..972482 /locus_tag="Acear_0899" /db_xref="GeneID:9512941" CDS 969270..972482 /locus_tag="Acear_0899" /note="COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR005479:IPR005483:IPR013817:IPR013816:IPR 005481:IPR005480:IPR011607:IPR011761:IPR016185:IPR006275; KEGG: dae:Dtox_2352 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; SPTR: C1T9B9 Carbamoyl-phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthase large subunit" /protein_id="YP_003827498.1" /db_xref="GI:302391678" /db_xref="GeneID:9512941" /translation="MPKREELKRVMVIGSGPIIIGQAAEFDYSGSQACRALKDEGVEV ILVNSNPATIMTDQNIADRVYIEPLTAEVVAKIIKQEKPDGLLPTLGGQTGLNIASEL ARKGLLEELDIEMLGTPLDTIEKAEDRDKFIQMLHEIDEPVLESKIADSIEEAKEIAE GIGYPVIIRPAYTMGGTGGGVADNPEELEEVASRGLKHSLIDEVLIEKSIKGWKEVEY EVMRDGANNCITVCNMENFDPVGIHTGDSIVVAPSQTLSDKEYQMLRSSSLKIIRELG IEGGCNVQFALDPDSFQYYIIEVNPRVSRSSALASKATGYPIAKVSTKIALGMTLAEI ENAITKKTSACFEPALDYIVFKIPRWPFDKFHYADRELGTQMKATGEVMAIDRLFESS MLKAVRSLEIGTYSLRLEESSEWTDEEMKEDLINAEDKRLFVVAEALRRGWSVDEVHE ITEIDTFFLWKMQNIIDHEQKIEEADELTAELLKEVKKLGFSDKDIAQLRGVTEDKIR ELREEKDIDAVYKMVDTCAAEFKAETPYYYSSYERENESETTDKKKAMVIGSGPIRIG QGIEFDYCSVHSAWALHEEGYESIIANNNPETVSTDFDTSDRLYFEPLTKEDMLNIIE HEDPEGVVVQFGGQTSINLAKPLADEGVEILGTSVEAIDIAEDRDKFMNLLDELDIPT PTGSTVYSVPEAKKTATEIGYPVVVRPSYVLGGRAMEVVYKEEELMQYMETEAKVSEE HPLLVDKYITGKEIEIDAISDGEDVLIPGIMEHIERAGVHSGDSIAVYPEQTLSEDER EQLIDYTVKLGRALNVKGLINIQYVVADGTVYVIEVNPRSSRTIPYLSKVTGVPMVKV ATKAMLGHKLNDLGYENGLWPEQDHVAVKVPVFSFSKLMKVDTSLGPEMKSTGEVLGI DHDYAKALYKAFVAAGIDIPEDGTILATIADKDKKEAIPFIKRFAQLGFNIVATKGTA KALKETGVEAESVNKISEGSPHVVDLIRDNEIDLVVNTLTKGKEPERDGFKIRRNAVE YGLPCLTSLDTTEAILHVLEEIKTEGNDNFEYLALQDYMA" misc_feature 969270..972473 /locus_tag="Acear_0899" /note="carbamoyl phosphate synthase large subunit; Reviewed; Region: carB; PRK05294" /db_xref="CDD:179998" misc_feature 969288..969635 /locus_tag="Acear_0899" /note="Carbamoyl-phosphate synthase L chain, N-terminal domain; Region: CPSase_L_chain; pfam00289" /db_xref="CDD:189488" misc_feature 969651..970271 /locus_tag="Acear_0899" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" misc_feature 970527..970874 /locus_tag="Acear_0899" /note="Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Region: CPSase_L_D3; pfam02787" /db_xref="CDD:190426" misc_feature 970926..971252 /locus_tag="Acear_0899" /note="Carbamoyl-phosphate synthase L chain, N-terminal domain; Region: CPSase_L_chain; pfam00289" /db_xref="CDD:189488" misc_feature 971268..971876 /locus_tag="Acear_0899" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" misc_feature 972078..972407 /locus_tag="Acear_0899" /note="Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways...; Region: MGS_CPS_II; cd01424" /db_xref="CDD:29636" misc_feature order(972093..972095,972111..972113,972171..972173, 972177..972182,972228..972230,972294..972299, 972303..972305) /locus_tag="Acear_0899" /note="IMP binding site; other site" /db_xref="CDD:29636" misc_feature order(972174..972176,972186..972188,972210..972212, 972216..972221,972225..972227,972261..972263) /locus_tag="Acear_0899" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29636" misc_feature order(972372..972374,972387..972389,972399..972401) /locus_tag="Acear_0899" /note="interdomain contacts; other site" /db_xref="CDD:29636" misc_feature 972372..972380 /locus_tag="Acear_0899" /note="partial ornithine binding site; other site" /db_xref="CDD:29636" gene 972500..973297 /locus_tag="Acear_0900" /db_xref="GeneID:9512942" CDS 972500..973297 /locus_tag="Acear_0900" /note="COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterProIPR012165:IPR008333:IPR001433:IPR019480:IPR 017927:IPR017938; KEGG: dae:Dtox_2351 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: C1T9B8 Dihydroorotate oxidase B, electron transfer subunit; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain" /codon_start=1 /transl_table=11 /product="oxidoreductase FAD/NAD(P)-binding domain protein" /protein_id="YP_003827499.1" /db_xref="GI:302391679" /db_xref="GeneID:9512942" /translation="MSRQINGDILANERINESDYRLVLSLPEIIDEVKPGQFLHVKCG PGVDPLLRRPLSIHQCNRDKGEIVLLYRVFGRGTELLATREVGEELDIMGPLGNGFDL TELKEKILVVGGGIGSAPLMALIERLVKLNKEVTVLIGAQNKEQLLCQDELTDLPVDF KTATNDGSAGYEGYVTGLLEQELEANEYEQIFACGPTPMLKAMQPLVSKKNIEMQLSL EERMGCGTGACLSCVCKVKVENEEGFEYRKACTDGPVFKASEVIFDE" misc_feature 972500..973288 /locus_tag="Acear_0900" /note="dihydroorotate dehydrogenase electron transfer subunit; Reviewed; Region: PRK00054" /db_xref="CDD:178828" misc_feature 972524..973270 /locus_tag="Acear_0900" /note="FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to...; Region: DHOD_e_trans; cd06218" /db_xref="CDD:99814" misc_feature order(972650..972652,972656..972667,972707..972715, 972731..972739,972845..972847,973157..973162) /locus_tag="Acear_0900" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99814" misc_feature order(972656..972658,972662..972667) /locus_tag="Acear_0900" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99814" misc_feature order(972728..972730,972737..972739,972746..972748, 972758..972760,972782..972784,972788..972790) /locus_tag="Acear_0900" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99814" misc_feature order(972830..972832,972842..972853,972857..972859) /locus_tag="Acear_0900" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99814" misc_feature order(972845..972850,972917..972925,973082..973087) /locus_tag="Acear_0900" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99814" misc_feature order(973169..973171,973184..973186,973193..973195, 973247..973249) /locus_tag="Acear_0900" /note="Iron coordination center [ion binding]; other site" /db_xref="CDD:99814" gene 973290..974207 /locus_tag="Acear_0901" /db_xref="GeneID:9512943" CDS 973290..974207 /locus_tag="Acear_0901" /EC_number="1.3.3.1" /note="COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR012135:IPR001295:IPR013785:IPR005720; KEGG: dae:Dtox_2350 dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase; SPTR: C1T9B7 Dihydroorotate oxidase B, catalytic subunit; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein" /codon_start=1 /transl_table=11 /product="dihydroorotate oxidase B, catalytic subunit" /protein_id="YP_003827500.1" /db_xref="GI:302391680" /db_xref="GeneID:9512943" /translation="MSKPDLAVDLNGLELNNPVVTASGTFGFGEEYEDYVDLDRLGGV MVKGTTLKPKQGNPTPRIAETPAGMLNAIGLQNPGVEYFIDEILPKIRDYEFQTIVNM SANTVEEYQELAEKLSQPEGIAALEVNISCPNVKKGGLAFGTEPKMAAGVVKAVTENT DLPVITKLSPNVTDITEIAQAVEEAGSDIISLINTLVGMKIDIDTQEPILANTIGGLS GPAIRPVAVKMVYQVAQAVDLPLIGMGGIMNSRDAVEFLLAGASAVSVGTANFSNPGV TMEIIDGIEEYLSEYGCDSVEEIVGKAIK" misc_feature 973305..974198 /locus_tag="Acear_0901" /note="dihydroorotate dehydrogenase (subfamily 1) family protein; Region: pyrD_sub1_fam; TIGR01037" /db_xref="CDD:130109" misc_feature 973308..974198 /locus_tag="Acear_0901" /note="Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine...; Region: DHOD_1B_like; cd04740" /db_xref="CDD:73402" misc_feature order(973380..973385,973392..973394,973428..973430, 973452..973454,973470..973475,973479..973481, 973515..973517,973947..973949,974103..974105, 974109..974114) /locus_tag="Acear_0901" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:73402" misc_feature order(973431..973433,973500..973502,973674..973676, 973683..973685,973788..973790,973866..973874, 973944..973946,974025..974027,974088..974093) /locus_tag="Acear_0901" /note="active site" /db_xref="CDD:73402" misc_feature order(973431..973433,973500..973502,973674..973676, 973788..973790,973866..973871,973944..973946, 974025..974027,974088..974093) /locus_tag="Acear_0901" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73402" misc_feature order(973482..973490,973719..973721,973803..973805, 973878..973898,973905..973913,973947..973949, 973956..973964,973968..973973,974052..974054, 974061..974066,974184..974186,974193..974195) /locus_tag="Acear_0901" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:73402" misc_feature order(973500..973502,973674..973676,973680..973682, 973869..973874) /locus_tag="Acear_0901" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73402" gene 974266..974838 /locus_tag="Acear_0902" /db_xref="GeneID:9512944" CDS 974266..974838 /locus_tag="Acear_0902" /note="COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR000836:IPR006273; KEGG: drm:Dred_1689 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: A4J563 Orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase, Thermus family; orotate phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="orotate phosphoribosyltransferase" /protein_id="YP_003827501.1" /db_xref="GI:302391681" /db_xref="GeneID:9512944" /translation="MDEKRVREIFKKTGVLQEGHFKLTSGKHSDQYLQCAQVFQYPKY VEELCEELASRFDEQEIDLVIAPAIGGIIMSYAMGTALGKKTIFAEREDGEMTLRRGF RINEGDKVLLVEDVTTTGGSVREVIDVVEERGGDLVGVGILVDRSGGEVDFGVQKEAL LTVDVKAYEPEECPLCEKELPIDKPGSRDI" misc_feature 974281..974829 /locus_tag="Acear_0902" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene complement(974953..975366) /locus_tag="Acear_0903" /db_xref="GeneID:9512945" CDS complement(974953..975366) /locus_tag="Acear_0903" /note="KEGG: similar to predicted protein; SPTR: Q8I1Y6 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827502.1" /db_xref="GI:302391682" /db_xref="GeneID:9512945" /translation="MTKDKREDELDIRNKKEEENEEPETLRNYGTENFDPADEEAAEE VVPGVGTVDEENEDLLADEPLADEEFANEAFGNDVMDEELAGNDVMGNEILNNDVDDV TDNDVMNDDALGNDVMDDEINDILDDETREKDEEK" gene 976175..978316 /locus_tag="Acear_0904" /db_xref="GeneID:9512946" CDS 976175..978316 /locus_tag="Acear_0904" /note="InterPro IPR002789; KEGG: cte:CT1915 hypothetical protein; PFAM: protein of unknown function DUF87; SPTR: A1ZJV9 Putative uncharacterized protein; PFAM: Domain of unknown function DUF87; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827503.1" /db_xref="GI:302391683" /db_xref="GeneID:9512946" /translation="MEKNDLEISMEEDVENYNNKKAAEKFSELVQKDQYVGETYSINY ETIKVVISDYFRKQVGGISSLSFLIATRVDPEKEYIDFKREDSSIILLRVLDATDTPE SNEKEALRHEIARRVSGENKFWDSEDAMDHKTREFLASSALECRIIGTFYLEEALKEA KGKLQLKFGCDISNFYPNKGLKVYKPNGEALEKIINYIDPETLKEHYEEYENNSKVRL GNVRYASTRRKHQKIDNVPVYMYPTDLLTQKTALFGMTRTGKSNTTKIIAKSVYELRY PDSEEGEPLRIGQLIFDPNGEYANETVQDRGSLKRVWKLKEDAKREDEVVTYGLDDHP DDPHRKHMRINFFKQELLQQGKDIINNILEDEGAQYIRNFVNVRFEKPNKNDYEDDEF WSYLVRYRRRVLVYQTLLKKAGFNEGYFKPKLKVGKTPFFNSDILEIMSNVELNNTKK QNLINSAAETLSKENPSWGALASAFEGLFYFISDTEAYIDYNQDYIKESTTGEGWADS DLERLLEMFVYSKGANLIGKAEDYHSFGMDEDYAEEIYNDLVEGKLVIVDQATGDPEI NKNVSKKIMWKIFRENQNKFRLGNKPDHILVYLEEAHNLLPAGTETDMQDIWVRTAKE GAKYNIGMIYATQEVSSIQKNILKNTANWFISHLNNTDETKELCKYYDFEDFERSIRR AQDKGFLRVKTLSSFFVKPIQVDLFEIEEGE" misc_feature 976874..>977086 /locus_tag="Acear_0904" /note="Domain of unknown function DUF87; Region: DUF87; pfam01935" /db_xref="CDD:145224" misc_feature <977582..978175 /locus_tag="Acear_0904" /note="HerA helicase [Replication, recombination, and repair]; Region: COG0433" /db_xref="CDD:30782" gene 978319..979707 /locus_tag="Acear_0905" /db_xref="GeneID:9512947" CDS 978319..979707 /locus_tag="Acear_0905" /note="InterPro IPR018977; KEGG: cte:CT1914 hypothetical protein; PFAM: NurA domain; SPTR: Q8KB75 Putative uncharacterized protein; PFAM: NurA domain" /codon_start=1 /transl_table=11 /product="NurA domain protein" /protein_id="YP_003827504.1" /db_xref="GI:302391684" /db_xref="GeneID:9512947" /translation="MGFENEFASYEPLRRIMSSEKVKNLQNRFKRRQRENEEFDNFIR DETILKDDLNKDGCLPNKIIAIDGSKQAVKAENGFPGSEFGYITIASVLIFVDKIREL EQREFIHPQEYRETEKATSIDGVLPGCNIIVDNEKTAKESFRKILYEELKDYKVFSDC ETLLETYEYILELKLEDEKENNSSAPKSPIGSVDKEMTYGFGEYKCPHSGKTLYSTDA LRLHELMKSGGTNGELYGQVMQTFEKLFLVHLLRSFEQKGWVSILDEIAFVLDGPLAV FSASSWLAKYIRREINRINKKQKKFSNKDMIIFGIEKSGMFVDHFIEVDREIYNEEKD KREKLIPNQSLFLIDDKYIKDNIIFSDAKKQYGSETYFGRKLFYKTQNGYHLVPVIIS YTQEQLDLSKAKVNQFPRLADVLSILDELVSVRYPNSLTPLISAHSEAAIPLNLGEKV FEKIAEEIKEKN" gene 979709..980818 /locus_tag="Acear_0906" /db_xref="GeneID:9512948" CDS 979709..980818 /locus_tag="Acear_0906" /note="InterPro IPR017985:IPR001091:IPR002941; KEGG: cte:CT1913 DNA methylase, PFAM: DNA methylase N-4/N-6 domain protein; SPTR: A1ZJW1 DNA methylase, PFAM: DNA methylase" /codon_start=1 /transl_table=11 /product="DNA methylase N-4/N-6 domain protein" /protein_id="YP_003827505.1" /db_xref="GI:302391685" /db_xref="GeneID:9512948" /translation="MNNYKKYFNGYSTPESRWSRFGPYYAMFPLEFAAKVITNHSEKG DWILDPFLGRGTSVYAGSILERKGLGIEINPVGWVFSVVKLNPAPIKDVLRRLKEICS QKEEYNKKILELPEFYDYCFCDEVLKFLLSAKDNLNWKEDLVDATLMGFILVYLHGKI GSNLSNQMQKTKAMGYDYSINWWIENNYSEPPKINPYEFMKKKVNWRYKKGRPQTEES EIELGDSTVILPEIVDDNNRKFSLLLTSPPYYGVTDYFIDQWLRLWMLGGSAKPNYSS DKHKGRFSSKENYYNLLDTVFSNASKVMKEKSAIYVRTDTREFTFKTTVNILKKNFPD HQMKIEGKPYNSRTQTEIFGQKSNKPGEMDIVLKK" misc_feature <979730..979933 /locus_tag="Acear_0906" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene 981179..982225 /locus_tag="Acear_0907" /db_xref="GeneID:9512949" CDS 981179..982225 /locus_tag="Acear_0907" /note="COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: swo:Swol_2548 hypothetical protein; PFAM: filamentation induced by cAMP protein Fic; SPTR: C6PXT3 Filamentation induced by cAMP protein Fic; PFAM: Fic/DOC family" /codon_start=1 /transl_table=11 /product="filamentation induced by cAMP protein Fic" /protein_id="YP_003827506.1" /db_xref="GI:302391686" /db_xref="GeneID:9512949" /translation="MMSFRNEKLKNEEVPMDIVKLIGKINEYKGKQNLYLDQAPQVLE KLKEVAVVQSTKASNSIEGIVITDKRLKEIMQDNTVPEDRSEGEIAGYRDVLNTIHTS YDAIPIKPNIILQFHRDLYKFVSPEGGKWKNQDNVIEEILPNGERYVRFKPLSAAKTP AAIEELCNYLNREMKEENIEPLILIGAFVLDFLSIHPFNDGNGRMARLLTLLLLYKYN YKVGRYISLEKVIAKSKSNYYEALNKSSVGWHEGDHNIFIWLNYFLGTLLAAYKEFED RVGLVRNKKGNKSYRVEQAIKSTLGKFEKGDIRNACPDVSESTINRVFKKLKEEGVIE LLGKGRNAKWKRLE" misc_feature 981227..982195 /locus_tag="Acear_0907" /note="Fic family protein [Function unknown]; Region: COG3177" /db_xref="CDD:32990" misc_feature 981497..981799 /locus_tag="Acear_0907" /note="Fic/DOC family; Region: Fic; cl00960" /db_xref="CDD:193989" gene 983004..983147 /locus_tag="Acear_0908" /db_xref="GeneID:9512950" CDS 983004..983147 /locus_tag="Acear_0908" /note="InterPro IPR000551:IPR009061; KEGG: ter:Tery_3670 DNA binding domain-containing protein; PFAM: regulatory protein MerR; SPTR: A3ITN8 Putative uncharacterized protein; PFAM: MerR family regulatory protein" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="YP_003827507.1" /db_xref="GI:302391687" /db_xref="GeneID:9512950" /translation="MKLSVKEAADFLGVAKSTLRRWDNEGKLVADRTEGGHRRYPYYS LFS" misc_feature 983010..>983129 /locus_tag="Acear_0908" /note="Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins; Region: HTH_MerR-trunc; cd04762" /db_xref="CDD:133390" misc_feature order(983013..983021,983061..983063,983109..983117) /locus_tag="Acear_0908" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133390" gene 983244..984752 /locus_tag="Acear_0909" /db_xref="GeneID:9512951" CDS 983244..984752 /locus_tag="Acear_0909" /note="InterPro IPR010095; KEGG: hya:HY04AAS1_0096 transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; SPTR: B4U6M0 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003827508.1" /db_xref="GI:302391688" /db_xref="GeneID:9512951" /translation="MLRTSKIRIIDQEFKEFAIEKVYLTRHFENMLLILLEQDYKQEI GDRKLISNPYVMRAVIRDTKGGQYADKVSYIKDKYQDHGLMQDLIKVGKQLKKDNLVM TMRKVRKDFKSFYTKVKNGDNSANPPKPKKLSKMNSYTLLIDNDKGMSLAYLKKGQNK LGITLDHDEGRKYLYIDHQAVRDIVGDLDNIQSVNLQYSNGELYLLITYHQEVDTNND RPHKLAGLDIGVDNLAAIYIEDGASPSLIVDGKKYKTYNSKFNRQIAQISNSIDTCKL ESRKNYLRKYKSYLFEKRNRFFYDQFHKVSKRLLEYLDQHDVTELVISDNLNHLKNNG NCKLQKKTKQNFIQIPFGKLLDYLKYKAKEYGIKVTVVNEAYTSKSNSFTNEMHKVKS LQQKIDSLKAQQKQIESDIKYQQCQCLIDAYQDLLDKYNYQGKRVKRGLYLDYINDLA MHSDINGARNIAKLSSNYQKKDCNNLKKLCNPIKVENDYQFCQLLKQDKQAA" misc_feature 983520..984227 /locus_tag="Acear_0909" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature 984123..984377 /locus_tag="Acear_0909" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" gene complement(985247..985681) /locus_tag="Acear_0910" /db_xref="GeneID:9512952" CDS complement(985247..985681) /locus_tag="Acear_0910" /note="COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR014710:IPR013096:IPR011051; KEGG: amt:Amet_2059 cupin 2 domain-containing protein; PFAM: cupin; SPTR: A6TPV2 Cupin 2, conserved barrel domain protein; PFAM: Cupin domain" /codon_start=1 /transl_table=11 /product="cupin" /protein_id="YP_003827509.1" /db_xref="GI:302391689" /db_xref="GeneID:9512952" /translation="MNDDYILPPPKDYGPCPFVINIEEATKRNNYYRIALWTGEYLQL TLMNIKVGNEIGLEMHPDLDQFIRVEQGEGIIKMGDRKNQFDFQAKVYDDYAIFIPAG KWHNMINTGRTPLKLYSIYAPPEHPRGTLHETKEDAEEHHRY" misc_feature complement(985265..985651) /locus_tag="Acear_0910" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene 985957..986820 /locus_tag="Acear_0911" /db_xref="GeneID:9512953" CDS 985957..986820 /locus_tag="Acear_0911" /note="COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: bha:BH0900 transcriptional regulator (enhancement of xylanase A production); PFAM: protein of unknown function DUF323; SPTR: Q9KEF2 transcriptional regulator (Enhancement of xylanase A production); PFAM: Formylglycine-generating sulfatase enzyme" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827510.1" /db_xref="GI:302391690" /db_xref="GeneID:9512953" /translation="MPKKMLIIVLASVLSLGLIGCGNDDIAENIDVPEMVLVEAGTTS EDNGSITVEEDFYIGKYHVTQAEFEEVMGFNPSLFDGNLLFGGNPYHPVENVTWYDAV KYCNELSEAEGLEKYYEISYIEYLEDDGEDWQHSQSIGSAKVEENEGANGYRLPTEVE YEYAARGGKNGEATTYAGSDNIDEIAWYWRNSGDEYLDGDYNYNFDRIENNNCKTHPV GEKQANELGIYDMSGNVWDWTNTLSDGPYPVERGGSWSYDAGSCEVDYRYSLSPSTGG SFLGFRLTKTR" misc_feature 986047..986811 /locus_tag="Acear_0911" /note="Formylglycine-generating sulfatase enzyme; Region: FGE-sulfatase; cl00556" /db_xref="CDD:193867" gene 986903..987718 /locus_tag="Acear_0912" /db_xref="GeneID:9512954" CDS 986903..987718 /locus_tag="Acear_0912" /note="COGs: COG1600 Uncharacterized Fe-S protein; KEGG: dol:Dole_1382 hypothetical protein; SPTR: A8ZYT1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827511.1" /db_xref="GI:302391691" /db_xref="GeneID:9512954" /translation="MNTISKLKFSSSILKKAKEFGADLVGIADVDELKESPSHTAAPK ISPVEVGQREGDLEPGEAAWPEGGKSVIVTAISHPEDKPELDWWHGKHSPPGNQKLVT VIKELIKWINNNYEEVETHYIPYHVEKGGIFLKDAAVMAGLGCIGRNNLLVSPEYGPR VRLRAMIVDVELPPTGPITFDPCSDCEEYCLEKCPQNSFGSIIYDREEIGQERLPGRI GDYSRFKCNDQMEKNIETAEEKDEKVLYEPSGEMVQLLKYCRNCEFSCPIGKE" misc_feature 986951..>987499 /locus_tag="Acear_0912" /note="Uncharacterized Fe-S protein [Energy production and conversion]; Region: COG1600" /db_xref="CDD:31788" misc_feature <987311..987703 /locus_tag="Acear_0912" /note="reductive dehalogenase; Region: RDH; TIGR02486" /db_xref="CDD:162882" gene complement(987875..988738) /locus_tag="Acear_0913" /pseudo /db_xref="GeneID:9512955" gene complement(988735..989037) /locus_tag="Acear_0914" /db_xref="GeneID:9512956" CDS complement(988735..989037) /locus_tag="Acear_0914" /note="InterPro IPR002514; KEGG: hor:Hore_13730 transposase IS3/IS911 family protein; PFAM: transposase IS3/IS911 family protein; SPTR: B8CXV6 transposase IS3/IS911 family protein; PFAM: transposase" /codon_start=1 /transl_table=11 /product="transposase IS3/IS911 family protein" /protein_id="YP_003827512.1" /db_xref="GI:302391692" /db_xref="GeneID:9512956" /translation="MGEKRRTYTEEFKKDAVELSNRSDKTVKNVSENLDIPYGTLIRW RREYKDKGDLAFPGHGKQKLTPEQKEIQRLKKELKDAKTERDILKKAVSIFSNEAK" misc_feature complement(988798..989031) /locus_tag="Acear_0914" /note="Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed...; Region: HTH_Hin_like; cl01116" /db_xref="CDD:186341" gene 989195..989389 /locus_tag="Acear_0915" /db_xref="GeneID:9512957" CDS 989195..989389 /locus_tag="Acear_0915" /note="COGs: COG4895 conserved hypothetical protein; InterPro IPR019240; KEGG: bbe:BBR47_50740 hypothetical protein; PFAM: protein of unknown function DUF2196; SPTR: C0Z5E5 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2196)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827513.1" /db_xref="GI:302391693" /db_xref="GeneID:9512957" /translation="MSGKNRKDIKPGLSVSVVQKKDQRSGKLTKGVVKDILTNSSTHP HGIKVRLESGKVGRVKEIHS" misc_feature 989195..989380 /locus_tag="Acear_0915" /note="Uncharacterized conserved protein (DUF2196); Region: DUF2196; cl02044" /db_xref="CDD:164009" gene 989848..990708 /locus_tag="Acear_0916" /db_xref="GeneID:9512958" CDS 989848..990708 /locus_tag="Acear_0916" /note="COGs: COG1281 Disulfide bond chaperones of the HSP33 family; InterPro IPR000397:IPR016153:IPR016154; KEGG: gtn:GTNG_0064 HSP33-like chaperonin; PFAM: Hsp33 protein; SPTR: A4IJE7 Putative 30 kDa replication protein; PFAM: Hsp33 protein" /codon_start=1 /transl_table=11 /product="Hsp33 protein" /protein_id="YP_003827514.1" /db_xref="GI:302391694" /db_xref="GeneID:9512958" /translation="MKDYLIRVMTTNKEIRALAVNSTGVVREAQKAHDTTPVATAALG RTLNGALLMGSMVKTGQETALKIAGDGPLGKIAAEANHHGEVRGYVQNPKVDFMTSRQ GKLDVAQAIGKGQLVVRKDLGVEEPYEGSVPLVSGEIGEDLTYYFTQSEQVPSAVGLG VLVDTDLSVKAAGGFIVQLLPEASEETIEQLEENLAEIESVSRLIDHGLSPEELLEKI LSGFEFRTLAEKEVIYKCKCSKEDTKNLLASLGKEEIEEIIAEEGKIEIECHFCGEVY QYSKEEVEEI" misc_feature 989848..990705 /locus_tag="Acear_0916" /note="Hsp33-like chaperonin; Reviewed; Region: hslO; PRK00114" /db_xref="CDD:178874" misc_feature 989860..990684 /locus_tag="Acear_0916" /note="Heat shock protein 33 (Hsp33): Cytosolic protein that acts as a molecular chaperone under oxidative conditions. In normal (reducing) cytosolic conditions, four conserved Cys residues are coordinated by a Zn ion. Under oxidative stress (such as heat...; Region: Hsp33; cd00498" /db_xref="CDD:29605" misc_feature order(989893..989895,990283..990285,990295..990303, 990379..990381,990553..990555) /locus_tag="Acear_0916" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29605" misc_feature order(989893..989895,990361..990363,990367..990369, 990379..990390) /locus_tag="Acear_0916" /note="domain crossover interface; other site" /db_xref="CDD:29605" misc_feature order(990553..990555,990559..990561,990652..990654, 990661..990663) /locus_tag="Acear_0916" /note="redox-dependent activation switch; other site" /db_xref="CDD:29605" gene 990768..991892 /locus_tag="Acear_0917" /db_xref="GeneID:9512959" CDS 990768..991892 /locus_tag="Acear_0917" /note="KEGG: amt:Amet_3703 hypothetical protein; SPTR: A6TUF5 Putative uncharacterized protein; PFAM: CHAP domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827515.1" /db_xref="GI:302391695" /db_xref="GeneID:9512959" /translation="MLIFIKSKRKMVLLLVIGCLVLYGSGVYLQNYFPEDSAVPVSED IEDMLTTKVQDIFKVRNKALLEKETDKLESLYSTETKGRWAYEHELKRMKYLHKWSDK QGVEFKEIDSRIVVKRIEEEEDGFSVNLSVSTEYQYVYEDSPETDNSFRTGSYHVLDL APQDEELVITKEWYRDPFADSLNLDELKDQKVKELILSKEPKDLSDLDEKRKKALEYV DQYCGAASPPEYGFEYNSDYKNYNYQGGDCTNFLSQVLYEAGGFSKDSTWNYSQGSGS KAWVNAHVFNRYMLNSGRGSLIARGTYDEVLEPSYKLLPGDYIAYEKNGKVAHVSIVT GIDSKGYILVNSHNADRHRVPWDLGWSNKGIKFLLVRVNY" misc_feature 991398..991868 /locus_tag="Acear_0917" /note="Putative amidase domain; Region: Amidase_6; pfam12671" /db_xref="CDD:193147" gene complement(991897..992253) /locus_tag="Acear_0918" /pseudo /db_xref="GeneID:9512960" gene 992350..992523 /locus_tag="Acear_0919" /pseudo /db_xref="GeneID:9512961" gene complement(992611..992856) /locus_tag="Acear_0920" /db_xref="GeneID:9512962" CDS complement(992611..992856) /locus_tag="Acear_0920" /note="InterPro IPR007159:IPR006339; KEGG: sth:STH3253 sporulation-related transcriptional regulator AbrB; PFAM: SpoVT/AbrB domain protein; SPTR: Q67JB5 sporulation-related transcriptional regulator AbrB; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family" /codon_start=1 /transl_table=11 /product="AbrB family transcriptional regulator" /protein_id="YP_003827516.1" /db_xref="GI:302391696" /db_xref="GeneID:9512962" /translation="MKATGIVRKVDDLGRIVIPIEIRRTLSLEAKDSVEIYVDNDSII FKKYEPACIFCGEASNTTAYKNKVVCEKCLEEMAETA" misc_feature complement(992617..992856) /locus_tag="Acear_0920" /note="SpoVT / AbrB like domain; Region: SpoVT_AbrB; cl00877" /db_xref="CDD:186236" gene 993124..993318 /locus_tag="Acear_0921" /db_xref="GeneID:9512963" CDS 993124..993318 /locus_tag="Acear_0921" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827517.1" /db_xref="GI:302391697" /db_xref="GeneID:9512963" /translation="MAENNQENQGLLNGILERIVGTGEDGNEEPGIAQEELENNNQET SPEAEFSDDEEERELNVVED" gene 993553..995337 /locus_tag="Acear_0922" /db_xref="GeneID:9512964" CDS 993553..995337 /locus_tag="Acear_0922" /note="COGs: COG3829 transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR000014:IPR003593:IPR002078:IPR009057:IPR 013767:IPR002197; KEGG: pth:PTH_0844 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; SPTR: A5D421 transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box" /codon_start=1 /transl_table=11 /product="PAS modulated sigma54 specific transcriptional regulator, Fis family" /protein_id="YP_003827518.1" /db_xref="GI:302391698" /db_xref="GeneID:9512964" /translation="MTKLREIGSFLQRVADAFAAVLDYEISIADHELTSLTGTGEFDK EMKSLCGQGMSRYLLSDSAATTSLFVEDTSSSEFCKHCQSKEVCPTKAAIVSCIRCSE QKMGAFSLIAVDEKQQQTMIENKSELMSFSQNVANFIASTLGEKQMRDQMKVMADRFR AVINSVHEGIIAINAKGIITHINRSAKQLLGIGQEKLGEDIDNLFSKIELDKILQEML EQNYNYFEEEIEYKKENKSFPLLCNITLINNNDQIAGATISFRKLDEMKKLANRIMAE DERITLDSIKGTSNQIVNIKKKVKKVASTDSTILIRGASGTGKGMFAQAIHKESNRCD NSFVTVNCAAIPENLLESELFGYEEGAFTGAKKGGKPGKFELADEGTIFLDEIGDMPI QFQVKLLKAIENKRIMRVGGVEPIDINVRIIAATNQDLDKMVTKGTFREDLFYRLNVI PINIPPLRERQEDISLLLHFFLEKYAELLNKEIKDFTAKAKKKLLNYSWPGNIRELEN TIEYAVNLETSHQITIQSLPNRILKYQLQVEEKDRVLPINEVEKKTIIKALKKFETKQ RAAEVLGISETTLYRRIKKYNIDSNRLD" misc_feature 993781..995319 /locus_tag="Acear_0922" /note="Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:33622" misc_feature 994021..994200 /locus_tag="Acear_0922" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature 994465..994920 /locus_tag="Acear_0922" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 994489..994512 /locus_tag="Acear_0922" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(994492..994515,994705..994707,994831..994833) /locus_tag="Acear_0922" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 994693..994710 /locus_tag="Acear_0922" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 994888..994890 /locus_tag="Acear_0922" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 995197..995310 /locus_tag="Acear_0922" /note="Bacterial regulatory protein, Fis family; Region: HTH_8; cl01091" /db_xref="CDD:186327" gene 995769..996620 /locus_tag="Acear_0923" /db_xref="GeneID:9512965" CDS 995769..996620 /locus_tag="Acear_0923" /EC_number="2.1.2.11" /note="COGs: COG0413 Ketopantoate hydroxymethyltransferase; InterPro IPR003700:IPR015813; KEGG: amt:Amet_1189 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: C1TQY2 Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase" /codon_start=1 /transl_table=11 /product="ketopantoate hydroxymethyltransferase" /protein_id="YP_003827519.1" /db_xref="GI:302391699" /db_xref="GeneID:9512965" /translation="MAKKKSILDFMEMKKDDEKVAWVTAYDYPMASFAEQAEMDMILV GDSLGMVVLGYDGTVPVTMEDCISHCQAVRRGAPNTFCVGDLPFMSYQISPEKAVENA GRFLKESDMDAVKLEGGRRVTDQIEAITDAGIVVCGHIGLTPQSSGQLGGFKAQGLTV ESARELIKDAVAVQEAGAKMLLVEAVPPEVTEFITEKLDIPVYSIGAGLPCDGQLLIC GDMLGMFQAFTPKFVKQYANIAEDAVAGFEEYVKEVKNKEFPKDEHVYHIQESEEKFE KLFDEFK" misc_feature 995787..996548 /locus_tag="Acear_0923" /note="Ketopantoate hydroxymethyltransferase (KPHMT) is the first enzyme in the pantothenate biosynthesis pathway. Ketopantoate hydroxymethyltransferase (KPHMT) catalyzes the first committed step in the biosynthesis of pantothenate (vitamin B5), which is a...; Region: KPHMT-like; cd06557" /db_xref="CDD:119342" misc_feature order(995787..995792,995847..995858,995865..995867, 995910..995912,995916..995933,995943..995948, 995961..995963,995970..995975,995982..995984, 995991..995993,996030..996035,996063..996065, 996075..996077,996084..996089,996102..996104, 996156..996173,996201..996206,996210..996221, 996303..996305,996423..996425,996432..996437, 996477..996479,996486..996500) /locus_tag="Acear_0923" /note="oligomerization interface [polypeptide binding]; other site" /db_xref="CDD:119342" misc_feature order(995838..995840,995895..995897,995901..995909, 996021..996023,996111..996113,996183..996185, 996198..996200,996318..996320,996411..996413, 996417..996419) /locus_tag="Acear_0923" /note="active site" /db_xref="CDD:119342" misc_feature order(995904..995906,996021..996023,996111..996113) /locus_tag="Acear_0923" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:119342" gene 996660..997886 /locus_tag="Acear_0924" /db_xref="GeneID:9512966" CDS 996660..997886 /locus_tag="Acear_0924" /note="InterProIPR006140:IPR008927:IPR016040:IPR011128:IPR 003421:IPR013328; KEGG: kol:Kole_0924 NAD/NADP octopine/nopaline dehydrogenase; PFAM: NAD/NADP octopine/nopaline dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; SPTR: C0WYP9 Possible opine dehydrogenase; PFAM: NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus" /codon_start=1 /transl_table=11 /product="NAD/NADP octopine/nopaline dehydrogenase" /protein_id="YP_003827520.1" /db_xref="GI:302391700" /db_xref="GeneID:9512966" /translation="MGNMEYLKDKPIAVLGAGAVGKAISADCALAGADVRLCDLEPFA EDTLFNVEEKGVKFYGQQLNLYGFERSGTAQYDKVTTDVAEAVEGAGIVIVTTPAVGH EPFFKELIPALEDGMVVHIFPDNYGTLVLRKMMREAGCDKDVIIGGWSSSPYGCRVDI KGGVVLPQIRAYYRAITLRGASLPSTDQNDFLESTKYMGCMDAITNGEGVTGGNTVMD TGFSNVNPVLHCPGTLLGVGVMENYGVVFGEDEYKYSIYSHAYCPSISEVQYSFYEEE RALAEAMGVGIQDFDKDDFFHRENILGQEYMGEDYRIPFDEQDEIQFGTGPHDIENRY ITEDIPVGCHVYHELGERFDVDTPVIDAMINIASAILDRDFYEEGYTLDYLGIGHMNK EEMLDYLHEGEYVEKE" misc_feature 996687..>997016 /locus_tag="Acear_0924" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 997314..997778 /locus_tag="Acear_0924" /note="NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain; Region: Octopine_DH; pfam02317" /db_xref="CDD:145458" gene 998019..999443 /locus_tag="Acear_0925" /db_xref="GeneID:9512967" CDS 998019..999443 /locus_tag="Acear_0925" /note="COGs: COG5598 Trimethylamine:corrinoid methyltransferase; InterPro IPR010426; KEGG: dat:HRM2_44130 MttB8; PFAM: trimethylamine methyltransferase; SPTR: C0QEW8 MttB8; PFAM: Trimethylamine methyltransferase (MTTB)" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase" /protein_id="YP_003827521.1" /db_xref="GI:302391701" /db_xref="GeneID:9512967" /translation="MNSNLKDKIGFEALTEEKIQEIHDASLTILEEQGVKVDDDEIKE MLADHGADVEGDMVCIPSELVEKAVNSAPDSITLYNRSGEVSMEVGKETIHFGTHADM LQIIDPFTDEVREFKREDTEMMTKVADYLPNIDFALAVGLASDVPEKIQSQLALLDTV RNFSKTINFSSNDVQGLKDQLEILSIVAGDLKTFSEKPFAFYYCEPIPPLYHPQESTD KLRLVAEAGVPSVYMPYCMLGGTAPITFAAALAQCNAEVLSGVVIHQLMNEGAPIIYG AMPSVFDMQTTVGAYAAPEFHMLIAAASELADYYGIPFYGTAGASDAKVIDEQAVSEG TMSCFSSMLSKADLIHDVGIMDHCNSLSPEMLVLYNEILDMLSVYRRGVPVNSDELAL DVIDEVGAAGHYLTHSHTSKNFKNIWYPEFFSRAMEGEEESQIRNKIKGKIEEIMENH KVCVDNDRIDDKLDEVESELFERV" misc_feature 998031..999275 /locus_tag="Acear_0925" /note="Trimethylamine methyltransferase (MTTB); Region: MTTB; cl02383" /db_xref="CDD:174723" gene 999469..1000260 /locus_tag="Acear_0926" /db_xref="GeneID:9512968" CDS 999469..1000260 /locus_tag="Acear_0926" /note="KEGG: ter:Tery_3123 hypothetical protein; SPTR: Q10ZR9 Putative uncharacterized protein; PFAM: Asp/Glu/Hydantoin racemase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827522.1" /db_xref="GI:302391702" /db_xref="GeneID:9512968" /translation="MFPYVNRDRDLNHIKAREGHACYGMGIGIMILDDVYPGFPGDVR NASAFPYPIQYEIAEGVDNYTLVWEEDKSPCREPILRAAKKLEDMGCRAIAAECGYFA YFQQDVAAHVDVPVFMSSLLQVPFIQQLIGSEKEVGIVCAQKRFLTDTHLEKVGIDPD SNIVIAGAQDEYGCPEFDNLWDHEKRPEVPEIYYDKAEEDMIRICKEFIEKNPDIGAI MLECTGMQPFARAIQREIDLPVFSWGTLLDYAYSVVAHREYYGHV" misc_feature 999502..1000257 /locus_tag="Acear_0926" /note="Asp/Glu/Hydantoin racemase; Region: Asp_Glu_race; cl00518" /db_xref="CDD:193849" gene 1000312..1001892 /locus_tag="Acear_0927" /db_xref="GeneID:9512969" CDS 1000312..1001892 /locus_tag="Acear_0927" /note="COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: afl:Aflv_1187 choline-glycine betaine transporter; PFAM: BCCT transporter; SPTR: C4ESZ5 Choline-glycine betaine transporter; PFAM: BCCT family transporter" /codon_start=1 /transl_table=11 /product="BCCT transporter" /protein_id="YP_003827523.1" /db_xref="GI:302391703" /db_xref="GeneID:9512969" /translation="MAKNKEKFSPRWGVIILPVLVFGAVLIMGFINSELLESTLYGYF EWFMVNFGWFVDIAALGFVLFCLGMIVHPIGNLKFGGEDAEPEFSFWHWFAMSLCAGI AIGIVMWPPEVLMHTLEPAKGMGLEPKSPEAMLWAMKKTFLHWTLTPYAIYVVCGTII GYVHYNLQKKFAASSALYPLLGDKAFGKVATVVDSITLFAICGGVAGSLGYGILQLGS ALEFSFGIQPGPVVWGAIATVIIASYTTSSITGLDKGIQWLSDKNTWLFIGLLFFVLF AGPTAFSLNLTTQAAGDFINNFIQTSTFTSPFQLSGDMWPQWWDMYWFTDWLSFAPIV GLFLARLCYGRTIRQFVIVNLLLPAGFGMLWFGVFGSFLLHLEFFQGAEIAAVMDAKG MEILMLKMFDFLPLSNIIRPVMILTILISFITLADSMTSTTSMVSTTGFEKYTTEEPP VKMKVFWGLLMGGVAVVSLMIGGIDGVKVIKTMAGIPILFFEVLMIIGFVRHRMHMGS DDNMNLESESQESTTVDQ" misc_feature 1000351..1001814 /locus_tag="Acear_0927" /note="BCCT family transporter; Region: BCCT; cl00569" /db_xref="CDD:189118" gene 1001910..1003325 /locus_tag="Acear_0928" /db_xref="GeneID:9512970" CDS 1001910..1003325 /locus_tag="Acear_0928" /note="COGs: COG5598 Trimethylamine:corrinoid methyltransferase; InterPro IPR010426; KEGG: dhd:Dhaf_4326 trimethylamine methyltransferase; PFAM: trimethylamine methyltransferase; SPTR: Q24SP7 Putative uncharacterized protein; PFAM: Trimethylamine methyltransferase (MTTB)" /codon_start=1 /transl_table=11 /product="trimethylamine:corrinoid methyltransferase" /protein_id="YP_003827524.1" /db_xref="GI:302391704" /db_xref="GeneID:9512970" /translation="MIKRNFLAQDILSNNEIEKIHNASMKILESTGIDILQEEAQEIF EEHGAKVEGKRVYLPRKLVEDALDRAPSSFTLHARNPENNVVIGGNNSVLAPSSGVPF VTDLDNGRRDATFEDYVNLTKIASDSDHIDVLGGLIVEPTDVADEKRHAKMFYAGAKY SDKCLVGSRYGTKSVQDCLEMARILFGEDEIIDDRAVLISIINTNSPLQLDNRMLSSL IEYAKYNQATVITPAAMAGSTGPMSIAGTLTLQNAEAIAGIVLTQLINPGAPVVYGCA STITDMKTAGLAIGSPEYAKFVGASAQLARYYDIPSRAGGSLTDSVMADAQAGYEAMM MFMSSINHGVNFILHSLGILDSYMMASYEKFIIDNEIVGMVKNYQSGIEVNEEMIAEE VINKVGPAGHFLEDAHTLQHMRDFRAPEISNRAGYNGEDNLITTAERANEKWKDTLAN FEEPYLDSVIEERLTEYMESL" misc_feature 1001913..1003310 /locus_tag="Acear_0928" /note="Trimethylamine methyltransferase (MTTB); Region: MTTB; cl02383" /db_xref="CDD:174723" gene 1003373..1004002 /locus_tag="Acear_0929" /db_xref="GeneID:9512971" CDS 1003373..1004002 /locus_tag="Acear_0929" /EC_number="2.1.1.13" /note="COGs: COG5012 cobalamin binding protein; InterPro IPR012741:IPR006158:IPR003759; KEGG: dth:DICTH_0565 trimethylamine corrinoid protein 2; PFAM: cobalamin B12-binding domain protein; methionine synthase B12-binding module cap domain protein; PRIAM: methionine synthase; SPTR: B5YD39 Trimethylamine corrinoid protein 2; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, methanosarcina family; methylmalonyl-CoA mutase C-terminal domain" /codon_start=1 /transl_table=11 /product="methyltransferase cognate corrinoid protein" /protein_id="YP_003827525.1" /db_xref="GI:302391705" /db_xref="GeneID:9512971" /translation="MSEFKEIANAVIDGEVEKVAEIAQELVDAGKKPSEIIKEGLVAG MDVVGDRFKNNEMFVPEVLISAKSMHAGMDIVKPLLAEADTSSAGTVVIGTVEGDLHD IGKNLVAMMIEGAGYEVVDLGVDKSADEIVEAVKEHQPDVVGLSALLTTTMPAMEEAI EALEEASIRNEVKVILGGAPVSKDFADEIGADGYAPDGSVATDLVRKFA" misc_feature 1003382..1003996 /locus_tag="Acear_0929" /note="Predicted cobalamin binding protein [General function prediction only]; Region: COG5012" /db_xref="CDD:34617" misc_feature 1003391..1003990 /locus_tag="Acear_0929" /note="B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or...; Region: corrinoid_protein_B12-BD; cd02070" /db_xref="CDD:30208" misc_feature order(1003664..1003684,1003691..1003693,1003802..1003810, 1003814..1003822,1003907..1003909,1003955..1003957, 1003964..1003966,1003973..1003975) /locus_tag="Acear_0929" /note="B12 binding site [chemical binding]; other site" /db_xref="CDD:30208" misc_feature 1003673..1003675 /locus_tag="Acear_0929" /note="cobalt ligand [ion binding]; other site" /db_xref="CDD:30208" gene 1004033..1004830 /locus_tag="Acear_0930" /db_xref="GeneID:9512972" CDS 1004033..1004830 /locus_tag="Acear_0930" /note="COGs: COG1410 methionine synthase I cobalamin-binding domain; InterPro IPR000489:IPR011005; KEGG: mta:Moth_2115 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; PFAM: dihydropteroate synthase DHPS; SPTR: Q2RGN2 5-methyltetrahydrofolate--homocysteine S-methyltransferase; PFAM: Pterin binding enzyme" /codon_start=1 /transl_table=11 /product="dihydropteroate synthase DHPS" /protein_id="YP_003827526.1" /db_xref="GI:302391706" /db_xref="GeneID:9512972" /translation="MIIIGELINTSRDEVEPAVKDRDTEFIQELAKKQEEAGADYIDV NCGTLIKEEPEALEWLVETVQEVVDVPLCIDSPDPEAIKRGLEAHEGKALVNSITAEE DRFQEILPLIQEYDAQIIALVMNEEGMPEDDTDRIETATKLIEDLTAEGIAEDDIYVD PIIQPIGTDEEMGEYILSAIDEITNKYQEVHITCGLSNISHGLPQRKLLNQTFVVLAM SRGMDSAILDPLDEKIMSLATAADTLLGKDQYCSNYIKASKSDKLTV" misc_feature 1004033..1004716 /locus_tag="Acear_0930" /note="Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a...; Region: Pterin_binding; cl00219" /db_xref="CDD:197403" misc_feature order(1004057..1004059,1004255..1004257,1004318..1004320, 1004324..1004326,1004396..1004398,1004510..1004512, 1004615..1004617,1004627..1004629,1004708..1004710, 1004714..1004716) /locus_tag="Acear_0930" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29544" misc_feature order(1004543..1004545,1004555..1004560,1004666..1004668, 1004678..1004680,1004690..1004692) /locus_tag="Acear_0930" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29544" misc_feature 1004621..1004629 /locus_tag="Acear_0930" /note="inhibitor binding site; inhibition site" /db_xref="CDD:29544" gene 1004914..1005693 /locus_tag="Acear_0931" /db_xref="GeneID:9512973" CDS 1004914..1005693 /locus_tag="Acear_0931" /note="KEGG: ckr:CKR_1801 hypothetical protein; SPTR: B9E2X7 Putative uncharacterized protein; PFAM: Asp/Glu/Hydantoin racemase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827527.1" /db_xref="GI:302391707" /db_xref="GeneID:9512973" /translation="MTCNHYGYLGEESDKENEFSIEKGQVIAGYTIGILLLDVWYPLM PGNVVNASTYDFPVRHKLVKGATQERMHTGDPTLLDDLVEAGRELEKEGVRAIIGACG YFGHFQPQLADELEVPVYLSSLVQIPLIEQGLKSNQKIGILCADEENLTSELMEKCGA RDPDICVVKGLGDKPEFSALPNSDRGEFDNGKVRDEVVTGAKNLVEEHEDVGAILLEC SDMPPYAADVQRAVNLPVYDFITMINWVHNSVAQKPYYGFL" misc_feature 1004962..1005690 /locus_tag="Acear_0931" /note="Asp/Glu/Hydantoin racemase; Region: Asp_Glu_race; cl00518" /db_xref="CDD:193849" gene 1005745..1007694 /locus_tag="Acear_0932" /db_xref="GeneID:9512974" CDS 1005745..1007694 /locus_tag="Acear_0932" /note="COGs: COG0840 methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089:IPR004010; KEGG: bbe:BBR47_16050 probable methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: C0Z9B2 Probable methyl-accepting chemotaxis protein; PFAM: HAMP domain; Cache domain; methyl-accepting chemotaxis protein (MCP) signaling domain" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer with Cache sensor" /protein_id="YP_003827528.1" /db_xref="GI:302391708" /db_xref="GeneID:9512974" /translation="MKKIYDFFDDQTIQSKLIVLMLLIGLVPIITLGYFEVQETKATI KESFINSTTKEIKQVDNAINLYFETIKENCKMFAADSSVKKADKTITTYTDKVTSEEL NLTPLENGGLEAEIYKEYLNFAKSHSNTAYVYMGTEYGSYIQWPATSLRKNYDPRERP FYEIAMKNKGEVVRTSPYASADGTGAIISTVTTIKDETGEVIGVQGLDVSLESLADLV KNMKIGKTGYVIMTTSDGTILAHPKKPELNFKNVRELGVDKLNNLSNIEQDNFKAVMN NKDYLMNVYTSSKTGWKFIAVVEESELAEALSGIYKQIIWITALAALVIIATAILFSK RFSQPIVDATNFAQEIARGNLNVESLQNKSNNEIGNLVQALDKMRDNLRNMIADLMDA IEDLSAYSQELSASAEEGNAVIETNNQNLNEMATSIQQISASSQEVTGLAQEANSQTQ AGSKQIDKITSIKGINQVVSNAVENINELNANSEEIEKIVDIITNIAEQTNLLALNAA IEAARAGEDGRGFAVVAEEIRELAEETAEATKEIDGLIQDTQNKSEAGLEAVKEMKDK IEDRKETLQKTSEVFSQIEAAIEDTSTHIQQTAVSTQNLAENSEQVMDASQDMKNMSQ EVTNSSQELANMAQKLQGLIEEFKV" misc_feature 1006267..1006476 /locus_tag="Acear_0932" /note="Cache domain; Region: Cache_1; pfam02743" /db_xref="CDD:145738" misc_feature <1006738..1006896 /locus_tag="Acear_0932" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature 1006927..1007688 /locus_tag="Acear_0932" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature 1007059..1007691 /locus_tag="Acear_0932" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene 1007719..1008996 /locus_tag="Acear_0933" /db_xref="GeneID:9512975" CDS 1007719..1008996 /locus_tag="Acear_0933" /note="COGs: COG1679 conserved hypothetical protein; InterPro IPR007506; KEGG: vap:Vapar_3213 protein of unknown function DUF521; PFAM: protein of unknown function DUF521; SPTR: C5CQY6 Putative uncharacterized protein; PFAM: protein of unknown function (DUF521)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827529.1" /db_xref="GI:302391709" /db_xref="GeneID:9512975" /translation="MLKLTDYEEQMLDGKEGRLKQVAMEKIVKYAKALGAKELCKVTK ATLYCGAHGYLDVLGSDDIDEIFSQMNMCTSEELSLDEIAECCFAQTCVAPMDSDKWE DLGVTERNYQKNEEFLDYYLDAGVEIAGSCVPYLTGWIPLMGEHFVTSESHVVLMCNS IWGACGNSDGIEAGFWSAVCGRTPKWGNHIMENRKGTHLFNLECKSETIVDWDLIGYT VGRKLPFHSVPVLDGEFRKPDIIRLKQCYGSMATTSGAEMCHIVGVTPEARTLDEALG VEEPQEIITITDEDIAQSRAMLCSDKEGKVEFVTLGCPHYTIEEIKEVAEFLEGKTID SEVKLLVWTTYTIKAMADRSGYTEIIQQAGGDIYTSSCPLVAGKRSHQGVIGIVTDSG KQSHYLKSESSTDVYFGNKFECLKSAVTGKWEV" misc_feature 1007722..1008969 /locus_tag="Acear_0933" /note="Protein of unknown function (DUF521); Region: DUF521; pfam04412" /db_xref="CDD:146848" misc_feature 1007743..1008972 /locus_tag="Acear_0933" /note="Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle; Region: Aconitase; cl00285" /db_xref="CDD:185883" misc_feature order(1007755..1007757,1007764..1007766,1008169..1008174, 1008844..1008846,1008880..1008882,1008895..1008897) /locus_tag="Acear_0933" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:153129" misc_feature order(1008175..1008177,1008655..1008657,1008832..1008834, 1008841..1008846,1008877..1008879) /locus_tag="Acear_0933" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:153129" gene 1009000..1009425 /locus_tag="Acear_0934" /db_xref="GeneID:9512976" CDS 1009000..1009425 /locus_tag="Acear_0934" /note="COGs: COG1786 conserved hypothetical protein; InterPro IPR002840; KEGG: bch:Bcen2424_6625 hypothetical protein; PFAM: protein of unknown function DUF126; SPTR: A2W9E3 Putative uncharacterized protein; PFAM: protein of unknown function DUF126" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827530.1" /db_xref="GI:302391710" /db_xref="GeneID:9512976" /translation="MSDKILIKGRGALGGKAEGRAMVCPESIQGWAGIDDETGEIIEQ GHSLEGKSINDAVVILPGSKGSNGWSCHFHATKIKGTHPAAWIFTKVDSRAGVAIAVE DIPAVTDLDQDPFELINTGDWVKVDGDRGIVEVIPHDKK" misc_feature 1009042..1009383 /locus_tag="Acear_0934" /note="Aconitase swivel domain. Aconitase (aconitate hydratase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. This is the aconitase swivel domain, which undergoes swivelling conformational change in the enzyme...; Region: Aconitase_swivel; cl00215" /db_xref="CDD:185833" misc_feature 1009195..1009203 /locus_tag="Acear_0934" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73200" gene complement(1009457..1009921) /locus_tag="Acear_0935" /db_xref="GeneID:9512977" CDS complement(1009457..1009921) /locus_tag="Acear_0935" /note="KEGG: nth:Nther_1566 hypothetical protein; SPTR: B2A437 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827531.1" /db_xref="GI:302391711" /db_xref="GeneID:9512977" /translation="MTTNLVWLYLFTVLTAAMILIVPPDRIKEFLSFGLIGGGLTAII LQVFGVNILEAWKFNTALIFINGIPLGILLAWIPPTIIFGHFTYRINSFISAGLYIIG FALLTAVITYGSVLLGYRSYLNWNPYLDFLLAFITHLGLAYYLFYQQRLRLT" gene complement(1010015..1010197) /locus_tag="Acear_0936" /db_xref="GeneID:9512978" CDS complement(1010015..1010197) /locus_tag="Acear_0936" /note="InterPro IPR018126; KEGG: hor:Hore_19070 small acid-soluble spore protein (minor alpha/beta-type SASP); SPTR: B8CZD6 Small acid-soluble spore protein (Minor alpha/beta-type SASP); PFAM: Small, acid-soluble spore proteins, alpha/beta type" /codon_start=1 /transl_table=11 /product="small acid-soluble spore protein (minor alpha/beta-type SASP)" /protein_id="YP_003827532.1" /db_xref="GI:302391712" /db_xref="GeneID:9512978" /translation="MSDIMSDETKYELAKELGFAHKVEDGDWGNITTREAGSLVKKAV KMAEEEKIKNMAQNIE" gene 1010458..1011756 /locus_tag="Acear_0937" /db_xref="GeneID:9512979" CDS 1010458..1011756 /locus_tag="Acear_0937" /note="COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: hor:Hore_12730 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: B8CXK4 Metal dependent phosphohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG" /codon_start=1 /transl_table=11 /product="metal dependent phosphohydrolase" /protein_id="YP_003827533.1" /db_xref="GI:302391713" /db_xref="GeneID:9512979" /translation="MKEKKDIDVSLFDMIMSLSDAMDLISTVVNGHHKRVAYIASSIA EELEMSKEEQRHLVIAGALHDVGAFSLQERLDALNFEVTDFLESLGLSKHAEVGYRLI NHFQPFDKIASLIRYHHVYWQEGAGAEFQSERIPLGSHILHLSDRIDVSINMKEEVLS QTDRINKRIKENTGNQFKPELVEVYLNLSDKESFWFDIISPVTMEILAEEFSGINISL SIDELGDLAELFSQIIDFRSRFTASHSSGVAATAQALGGQIGLSKIDRKKIKIAGYLH DLGKLAVPTEILEKEEKLTDEEFNIIKKHVYHTYHTLKGVSGLEEINTWAAFHHERLD GNGYPFHHQKEELSLGSRIMAVADVFTAITENRPYREGMDKDRALEVLQDMVQDSALD SDVVTVLADNYEEINIIRQTAQREETEEYKRFLQEVNGSY" misc_feature 1010551..1010940 /locus_tag="Acear_0937" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature order(1010551..1010553,1010647..1010652,1010893..1010895) /locus_tag="Acear_0937" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature 1010650..1010652 /locus_tag="Acear_0937" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature 1011178..1011603 /locus_tag="Acear_0937" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature order(1011187..1011189,1011283..1011288,1011529..1011531) /locus_tag="Acear_0937" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature 1011286..1011288 /locus_tag="Acear_0937" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene 1011759..1011845 /locus_tag="Acear_0938" /pseudo /db_xref="GeneID:9512980" gene complement(1011940..1012953) /locus_tag="Acear_0939" /db_xref="GeneID:9512981" CDS complement(1011940..1012953) /locus_tag="Acear_0939" /note="COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR010982:IPR001761; KEGG: cpo:COPRO5265_1470 catabolite control protein A (glucose-resistance amylase regulator); PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C6Q8U5 transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_003827534.1" /db_xref="GI:302391714" /db_xref="GeneID:9512981" /translation="MKVTIKDIARIAEVSVATVSRVINNKKYVSEDTRKKVLEVIDRL DYKPDNIARSMITKKTDTIGLVIPELTNPFYAETSQIIVDTARQYGFSTMIYTTDNQS GLQQGEEYINILLQKQIDGIIFGSVRTEENCLSKLDSKDLPYITYHRRLMSEDSNFVV TDDKQGIYDAVEYLVNLGHSSIGYISGPHQFSTSISRLQGFLEVREHFGLDTRPQLIK DGAFSEEQAWKATKKLINLDQRPSAIIAANDLMALAALDCCLEFGLKIPEDISIIGYD NIHLSSHARIQLTTVSVKPRIMAQKTAKLLITEILEKKSTSPVQSILKPKLIIRETTK KSN" misc_feature complement(1011943..1012947) /locus_tag="Acear_0939" /note="Transcriptional regulators [Transcription]; Region: PurR; COG1609" /db_xref="CDD:31797" misc_feature complement(1012783..1012938) /locus_tag="Acear_0939" /note="Helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators; Region: HTH_LacI; cd01392" /db_xref="CDD:143331" misc_feature complement(order(1012786..1012791,1012795..1012800, 1012807..1012809,1012816..1012818,1012855..1012857, 1012864..1012869,1012882..1012884,1012891..1012896, 1012900..1012914,1012936..1012938)) /locus_tag="Acear_0939" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature complement(1012789..1012818) /locus_tag="Acear_0939" /note="domain linker motif; other site" /db_xref="CDD:143331" misc_feature complement(1011970..1012770) /locus_tag="Acear_0939" /note="Ligand binding domain of the LacI tanscriptional regulator family belonging to the type I periplasmic-binding fold protein superfamily; Region: PBP1_LacI_sugar_binding_like; cd06267" /db_xref="CDD:107262" misc_feature complement(order(1012171..1012176,1012183..1012185, 1012195..1012197,1012279..1012281,1012600..1012608, 1012615..1012617,1012624..1012626,1012663..1012665, 1012669..1012683,1012702..1012707,1012711..1012716, 1012723..1012731,1012768..1012770)) /locus_tag="Acear_0939" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:107262" misc_feature complement(order(1012075..1012077,1012126..1012128, 1012288..1012290,1012363..1012365,1012471..1012473, 1012510..1012512,1012579..1012581,1012720..1012722, 1012729..1012734)) /locus_tag="Acear_0939" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:107262" gene 1013263..1013655 /locus_tag="Acear_0940" /db_xref="GeneID:9512982" CDS 1013263..1013655 /locus_tag="Acear_0940" /note="InterPro IPR011051:IPR013096:IPR014710:IPR010462; KEGG: tsi:TSIB_1632 hypothetical protein; PFAM: cupin; SPTR: C6A4Y8 Putative uncharacterized protein; PFAM: Cupin domain" /codon_start=1 /transl_table=11 /product="cupin" /protein_id="YP_003827535.1" /db_xref="GI:302391715" /db_xref="GeneID:9512982" /translation="MVINIKDVPGVKVPAPNNRVLKTLMCPELDNCDEHTILISIIES DSSTGVHTHEAAEYMYVATGRGEAVTIEDGEEIVEPIEPDCLIYAPEGVEHDVRNLGD ETLKLFCVYTPAIEPQGKFLESIEIQKR" misc_feature 1013374..1013595 /locus_tag="Acear_0940" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene 1013878..1014111 /locus_tag="Acear_0941" /db_xref="GeneID:9512983" CDS 1013878..1014111 /locus_tag="Acear_0941" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827536.1" /db_xref="GI:302391716" /db_xref="GeneID:9512983" /translation="MNKNNYRKIIGILMVMCLIMMCPPFYNLANKPVLLLGIPVFILW NLFFGTVLTCLLVVLFKLDDKYENYENKEDKKI" gene 1014108..1015778 /locus_tag="Acear_0942" /db_xref="GeneID:9512984" CDS 1014108..1015778 /locus_tag="Acear_0942" /note="COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: pho:PH1044 hypothetical protein; PFAM: Na+/solute symporter; SPTR: C0N5J6 Putative transporter, SSS family; PFAM: Sodium:solute symporter family" /codon_start=1 /transl_table=11 /product="Na+/solute symporter" /protein_id="YP_003827537.1" /db_xref="GI:302391717" /db_xref="GeneID:9512984" /translation="MIDTSLISGSFSGIPFVMMGIYIVAVVYLSVKAIAAKKIEDVEV TFEEHYTANKTMPGFIVALLILVTFYSGSTFTGKVGFVVKHGVAGGMFYIAACVGAGI ALYFLAEKIWPLAKKYRLSTLADLMELRYQSKKIKVMIAAVVIAFSLIWLILEMLTLG YIFSLISGGVISKTVGSFIGMTLIVTYVMFGGVRSVASVDSFSALVMLFGSITSMIFL IIKFYDGNIFYMFNVIHETAPQALTVPLSGEVAWQVYISYIFLTLFTLMLYPANYMEI CLGESLREVRKSAIATAFSGLWNIVFILISLAGIGLVGLSGLGFEQFADPQSALLEMA QLTGSSVFFGLVTTFMFAAALGTVDSTLMSLSGVISNDIITAFRRIKNNEKCIGSSKD KDSIDKRVTVNAKKEVRIARISALVLSLLAFALGTQKLPMMLIMVAYAGEGIMQLIPL VLGGLYWKKSTPQGAYAGTIVGLISFLVFKNIGFEPFGGLMSGFPALALNSIVFVVVS KLTADKYYSNYLKKYNHVFEDFFVKGKVLKDLNNDEIDEVGNDTPAKV" misc_feature 1014147..1015649 /locus_tag="Acear_0942" /note="Sodium:solute symporter family; Region: SSF; cl00456" /db_xref="CDD:186007" gene 1016131..1016523 /locus_tag="Acear_0943" /db_xref="GeneID:9512985" CDS 1016131..1016523 /locus_tag="Acear_0943" /note="InterPro IPR011051:IPR013096:IPR014710:IPR010462; KEGG: tsi:TSIB_1632 hypothetical protein; PFAM: cupin; SPTR: C6A4Y8 Putative uncharacterized protein; PFAM: Cupin domain" /codon_start=1 /transl_table=11 /product="cupin" /protein_id="YP_003827538.1" /db_xref="GI:302391718" /db_xref="GeneID:9512985" /translation="MVINIKDVPGVKVPAPNNRVLKTLMCPELDNCDEHTILISIIES DSSTGVHTHEAAEYMYVATGRGEAVTIEDGEEVVEPIEPDCLIYAPEGVEHDVRNLGD ETLKLFCVYTPAIEAEGKFLESIEIQKK" misc_feature 1016242..1016463 /locus_tag="Acear_0943" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene 1016553..1017326 /locus_tag="Acear_0944" /db_xref="GeneID:9512986" CDS 1016553..1017326 /locus_tag="Acear_0944" /EC_number="4.1.2.20" /note="COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR015813:IPR005000; KEGG: amt:Amet_0505 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase; PRIAM: 2-dehydro-3-deoxyglucarate aldolase; SPTR: A8RKI9 Putative uncharacterized protein; PFAM: HpcH/HpaI aldolase/citrate lyase family" /codon_start=1 /transl_table=11 /product="2-dehydro-3-deoxyglucarate aldolase" /protein_id="YP_003827539.1" /db_xref="GI:302391719" /db_xref="GeneID:9512986" /translation="MIRKNEVKQKLKNGEPVVGTFVKMNDPASVEILGLAGFDFFVAD NEHISRDKETMVNMIRAAEITDIAPIIRVRENSFIEVLQALDAGALGVQVPNVDTKEG IEEVIRSAKYAPEGQRGFSPGNRSAGYGTMDKQEFVKQANEDTLVVMHCETETSMNNL DEILLEDELDVVFIGPMDLSQSLGIIGQGDHPKLKESVDTIVDKVLDAGKDVGMVASN PAQAKELIDRGVNYVMISTDHGMLGSSAREFVAEMKEDE" misc_feature 1016553..1017314 /locus_tag="Acear_0944" /note="2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism]; Region: HpcH; COG3836" /db_xref="CDD:33628" misc_feature 1016565..1017314 /locus_tag="Acear_0944" /note="Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors. Like other allosteric enzymes, PK has a high substrate affinity R state and a low...; Region: Pyruvate_Kinase; cl09155" /db_xref="CDD:195807" gene 1017361..1018317 /locus_tag="Acear_0945" /db_xref="GeneID:9512987" CDS 1017361..1018317 /locus_tag="Acear_0945" /note="COGs: COG0111 phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006140:IPR016040:IPR006139; KEGG: mka:MK0297 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: Q8TYK0 Predicted dehydrogenase related to phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain" /codon_start=1 /transl_table=11 /product="D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein" /protein_id="YP_003827540.1" /db_xref="GI:302391720" /db_xref="GeneID:9512987" /translation="MKKVLLTEPIHEEGVKLLEEVAEVVQASDYKIDTLVEEAADCHG IIIRKAEIPTEVIKNAPQLEVVAKHGVGVDNIDIETATKEGVVVVNAPESNIYSVAEH TLTMILTIAKNFVVMDKEVREGRFHSRDKIIGTELKGKTAGIIGMGTIGLILTDMLQA MDVEVIAYDPYADPVQAEEAGIELVDELDDIYARADIVSLHLPLNDETEGMIDEDAFA KMKESAFFINAARGAIADEEALYEALKTGEIKGAALDVYTNNPPSSDNPLFELDNVVC SPHNAALTEESKIKMATHAAQGVIDCFKGEEPEYLINPEVLK" misc_feature 1017361..1018299 /locus_tag="Acear_0945" /note="Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]; Region: SerA; COG0111" /db_xref="CDD:30460" misc_feature 1017670..1018203 /locus_tag="Acear_0945" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene 1018342..1019511 /locus_tag="Acear_0946" /db_xref="GeneID:9512988" CDS 1018342..1019511 /locus_tag="Acear_0946" /note="COGs: COG0407 uroporphyrinogen-III decarboxylase; KEGG: dsy:DSY4756 hypothetical protein; SPTR: Q24N47 Putative uncharacterized protein; PFAM: uroporphyrinogen decarboxylase (URO-D)" /codon_start=1 /transl_table=11 /product="uroporphyrinogen-III decarboxylase" /protein_id="YP_003827541.1" /db_xref="GI:302391721" /db_xref="GeneID:9512988" /translation="MSELTSRERIIKALEHQETDRIPIDIGGIYNLTTLHRDAYINLM DYLGYDCDEDEAEIAYFNSQSVLIDEEIRQRFKSDCYPLYTSGPGDWELEIHEDEDGR KWYKDEFGIKWQTSGLYYDPVGNPLKDCTVEDIENYPWPDPKDPSRIAGLKKEAKRIY EETDYCLVLSGPLGGGIYVPCTWFIGYQEFFMKLVMEPEIVEALLEKIVDFHLGWWEM VLEEIGEYLQVVVLSDDLGTQEAPLMRPSMYREQIKPAQEKVVSFIKSKADVKVVYHC DGAVSEFIPDMIDIGFDALNPVQVSAEGMGDTARLKEEFGDEISFWGATCDSQNTLSK GTPEEIRQEVKQRVNDLAAGGGLVLASIHNIQKDVPPENIVAFYDALYESACDAY" misc_feature 1018372..1019490 /locus_tag="Acear_0946" /note="The URO-D_CIMS_like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases, as well as cobalamine (B12) independent methionine...; Region: URO-D_CIMS_like; cl00464" /db_xref="CDD:193829" gene 1019538..1020410 /locus_tag="Acear_0947" /db_xref="GeneID:9512989" CDS 1019538..1020410 /locus_tag="Acear_0947" /EC_number="5.3.1.-" /note="COGs: COG3718 Uncharacterized protein involved in inositol metabolism; InterPro IPR011051:IPR010669; KEGG: dth:DICTH_0482 myo-inositol catabolism protein; PFAM: Myo-inositol catabolism IolB domain protein; SPTR: A1HM17 Myo-inositol catabolism IolB domain protein; PFAM: KduI/IolB family" /codon_start=1 /transl_table=11 /product="5-deoxyglucuronate isomerase" /protein_id="YP_003827542.1" /db_xref="GI:302391722" /db_xref="GeneID:9512989" /translation="MSNLYRFEDEEGYQNIITEDNSDMKYLNFDRILLEAGDRLEHKV EDRELAIVLQDGDFTATVECENSTGLEEVKGVRYDVFDQLPTAIYIPPKSSFKLETET GMEARVYAAPCNEGGAAHFVKPEDLTETMSGAKNWRRSVRVIFGPESDITQKLIVGES VSNPGSWIGFPAHKHDTESDDEYPLEEIFSFKLQGAHGAFAVHHTFNYEEGWDESHII DDENCAVAIPKGYHTSQAAPGCRYYLLWGLAGKEKVYKLTFDPRFKWLQDAETLFEES VGRELTDVMVGKVK" misc_feature 1019547..1020335 /locus_tag="Acear_0947" /note="KduI/IolB family; Region: KduI; cl01508" /db_xref="CDD:194154" gene 1020469..1021311 /locus_tag="Acear_0948" /db_xref="GeneID:9512990" CDS 1020469..1021311 /locus_tag="Acear_0948" /note="COGs: COG1402 Uncharacterized protein amidase; InterPro IPR003785; KEGG: tma:TM0413 creatinine amidohydrolase, PFAM: creatininase; SPTR: A8RKI8 Putative uncharacterized protein; PFAM: Creatinine amidohydrolase" /codon_start=1 /transl_table=11 /product="creatininase" /protein_id="YP_003827543.1" /db_xref="GI:302391723" /db_xref="GeneID:9512990" /translation="MTEEAEKKESYWWQHKSWNEVVEHAKECDIAILPLGSIEQHGHH LPTGHDTLQLFPMLEKVAEETGAMLLPTPWYGAHPHHHWDFPGTIPLSNDTLDKLIKD VVKGASKAGFKKFILFFGHGQAFVTNYTVNDLGKEGYFVLSVMFQRMIRDVHDDIFET PFWHADEAETSIALAHFAEYVDMSKAVDMDATSLVDGDFVDGCTDYASSKPLRFDSGT VSAPEYKDLTNEDGELIGVVGKPSLATEEKGKEYTDYVVERTIKLVNHIKEKHPTGED VETN" misc_feature 1020559..1021260 /locus_tag="Acear_0948" /note="Creatinine amidohydrolase; Region: Creatininase; cl00618" /db_xref="CDD:193888" gene 1021481..1023385 /locus_tag="Acear_0949" /db_xref="GeneID:9512991" CDS 1021481..1023385 /locus_tag="Acear_0949" /EC_number="1.2.7.5" /note="COGs: COG2414 aldehyde:ferredoxin oxidoreductase; InterPro IPR013983:IPR001203:IPR013984; KEGG: pth:PTH_2897 aldehyde:ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase; PRIAM: aldehyde ferredoxin oxidoreductase; SMART: aldehyde ferredoxin oxidoreductase; SPTR: C0GC51 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase, N-terminal domain; aldehyde ferredoxin oxidoreductase, domains 2 & 3" /codon_start=1 /transl_table=11 /product="aldehyde ferredoxin oxidoreductase" /protein_id="YP_003827544.1" /db_xref="GI:302391724" /db_xref="GeneID:9512991" /translation="MGNGYHSKILKVNLTEEKIMIDEKEDKFYRKYLGGPGIAAYYAL KEIPQGADPLGPENALIITNSVVTGSPAPGVMRYSVSAKSPLTGAFGTSEAGGWWGPR FKKAGYDGVIIKGQAAEPTYLFVSDEEVSLKTAENLWGKTTKEVEEILQDRHGSRARV LQIGPGGENQVTYANICNDLAHFNGRNGMGAVMGSKNLKAIVAKGQQDVPCSDEQSVK DIMKWVGKNVHDHPLTSGLHETGTAGGITSVNAGGALPTNNWKENYFSDAEQIGSDAL EEILINRTGCFGCPIRCKRVVEYEDEDYKIDPEYGGPEYETLGAIGSNCGFNDIKLVS KANELCNKYTIDTISFGMTLSFAMHCYEEGLLTKEDTGGFELEFGNGDVLLPLIEQTA KQEGFGKKLALGSARLAKEIGEEAKPFLRVTKNQEVPMHDPRVKTGLGLQFALSSYGG DHWVAQHDPFFTEEDSLGTQAIKPLGILEEVPAVDLSADKIRFFYYTNLLTSVYDCLG TCVFSVIARGILPLDKFMDLVEGVTGWNTSLWELMKVGERTENLMRLFNIREGFSAED DKLPEHFFKDIKGGPHDGEKALDKEEFEAAIKQYYQMAGWDEDGKPLKAKLKELALHD EFKEIVEEYL" misc_feature 1021487..1023310 /locus_tag="Acear_0949" /note="Aldehyde:ferredoxin oxidoreductase [Energy production and conversion]; Region: COG2414" /db_xref="CDD:32549" misc_feature 1021493..1022101 /locus_tag="Acear_0949" /note="Aldehyde ferredoxin oxidoreductase, N-terminal domain; Region: AFOR_N; cl08354" /db_xref="CDD:158266" misc_feature 1022129..1023310 /locus_tag="Acear_0949" /note="Aldehyde ferredoxin oxidoreductase, domains 2 & 3; Region: AFOR_C; pfam01314" /db_xref="CDD:189938" gene 1023477..1023710 /locus_tag="Acear_0950" /db_xref="GeneID:9512992" CDS 1023477..1023710 /locus_tag="Acear_0950" /note="InterPro IPR016155; KEGG: dat:HRM2_23550 MoeD; SPTR: C0GC50 ThiamineS protein" /codon_start=1 /transl_table=11 /product="MoeD" /protein_id="YP_003827545.1" /db_xref="GI:302391725" /db_xref="GeneID:9512992" /translation="MKEIQVKLHGGLDKYLDRKKLTEMAVPDDATITWLYGELGLEKN ETKIVLQNDKKVKLDAEIEADAQIDIYPIFGGG" gene 1023742..1024524 /locus_tag="Acear_0951" /db_xref="GeneID:9512993" CDS 1023742..1024524 /locus_tag="Acear_0951" /note="COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: tro:trd_A0590 metal-dependent hydrolase; SPTR: C0UUQ2 Predicted Zn-dependent hydrolase of beta-lactamase fold" /codon_start=1 /transl_table=11 /product="metal-dependent hydrolase" /protein_id="YP_003827546.1" /db_xref="GI:302391726" /db_xref="GeneID:9512993" /translation="MSLQEEIKKLEVSTGNIAIFWLGNAGFVLKSAQGEIIYIDPYLS NCAERLYGFQRIYPSLITEDEVEADYVLISHEHGDHLDVDSIPSIMEQEEIKLIAPQP CIDKCCNLGVNKDKLLQVEEGSEVELNSCKVRVVFADHGDLAPQAVGYMLDFAGTKVY YTGDTAYTPDKMELAFGMEPEVLIAPINGKFNNLNPLEAALVTRDCKVEVVIPSHFWM FAEHNGNPGEFVEYVDYIAPEAESELITLGDYYLYSGNEENR" misc_feature 1023772..1024509 /locus_tag="Acear_0951" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" gene 1024553..1025605 /locus_tag="Acear_0952" /db_xref="GeneID:9512994" CDS 1024553..1025605 /locus_tag="Acear_0952" /note="COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterProIPR002328:IPR011032:IPR016040:IPR013154:IPR 013149; KEGG: rba:RB5948 Zn-dependent alcohol dehydrogenase; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; SPTR: C6J3Q4 alcohol dehydrogenase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase GroES domain protein" /protein_id="YP_003827547.1" /db_xref="GI:302391727" /db_xref="GeneID:9512994" /translation="MTEKMKAARIFGKQDMRVVDIPIPEVGPEQALIKVKAVGVCGSD VELYEGDHPYLEWGCTTLPITPGHEWAGVIEEVGEDVTDFGPGDRVVGDVSLGCGDCS YCMSGRYNLCPNRRVVGSYRNKEGGFAEYIVMPARNLYNVPESISMPEAALVESAATC VYGVMRTDIEMGDTVLVIGDGPIGQLAVQCADAAGAKEVILSGSYDEKLAIVEKLCNA ETINRHNQEVIEAVMEYTAGQGADVVIEACGNETGLQQAIEAVKPGGELCLLSIYPQS ELTVDVNTTIVKDLDIHNCLASPNAFQPTIDMMESGKIQTQDLITQTLSLKDAEGAFD FIYEERAKTLKVVITP" misc_feature 1024565..1025602 /locus_tag="Acear_0952" /note="Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]; Region: Tdh; COG1063" /db_xref="CDD:31263" misc_feature 1024565..1025599 /locus_tag="Acear_0952" /note="Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; Region: MDR; cl14614" /db_xref="CDD:196795" misc_feature order(1024673..1024681,1024688..1024690,1025015..1025017, 1025027..1025029,1025087..1025104,1025159..1025164, 1025174..1025176,1025219..1025221,1025291..1025296, 1025360..1025365,1025435..1025443) /locus_tag="Acear_0952" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176178" gene 1025658..1026287 /locus_tag="Acear_0953" /db_xref="GeneID:9512995" CDS 1025658..1026287 /locus_tag="Acear_0953" /EC_number="2.1.1.13" /note="COGs: COG5012 cobalamin binding protein; InterPro IPR012741:IPR006158:IPR003759; KEGG: dth:DICTH_0565 trimethylamine corrinoid protein 2; PFAM: cobalamin B12-binding domain protein; methionine synthase B12-binding module cap domain protein; PRIAM: methionine synthase; SPTR: C0GT02 Cobalamin B12-binding domain protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, methanosarcina family; methylmalonyl-CoA mutase C-terminal domain" /codon_start=1 /transl_table=11 /product="methyltransferase cognate corrinoid protein" /protein_id="YP_003827548.1" /db_xref="GI:302391728" /db_xref="GeneID:9512995" /translation="MSEFNEIADAVINGEVEKVAEIAQKLVDAGQKPSKIIKEGLVAG MNVVGKRFKNQDMFVPEVLISAKSMHAGMDIVKPLLSDADSSSAGTVVIGTVKGDLHD IGKNLVAMMIEGAGFEVVDIGIDKSADEIVEAVKEHKPDVLGLSALLTTTMPAMEEAI EALEEAGIRDEVKIILGGAPVSQDFADEIGADGYAPDGSVATDLVRELA" misc_feature 1025667..1026281 /locus_tag="Acear_0953" /note="Predicted cobalamin binding protein [General function prediction only]; Region: COG5012" /db_xref="CDD:34617" misc_feature 1025676..1026278 /locus_tag="Acear_0953" /note="B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or...; Region: corrinoid_protein_B12-BD; cd02070" /db_xref="CDD:30208" misc_feature order(1025949..1025969,1025976..1025978,1026087..1026095, 1026099..1026107,1026192..1026194,1026240..1026242, 1026249..1026251,1026258..1026260) /locus_tag="Acear_0953" /note="B12 binding site [chemical binding]; other site" /db_xref="CDD:30208" misc_feature 1025958..1025960 /locus_tag="Acear_0953" /note="cobalt ligand [ion binding]; other site" /db_xref="CDD:30208" gene 1026321..1027118 /locus_tag="Acear_0954" /db_xref="GeneID:9512996" CDS 1026321..1027118 /locus_tag="Acear_0954" /EC_number="2.1.1.13" /note="COGs: COG1410 methionine synthase I cobalamin-binding domain; InterPro IPR000489:IPR011005; KEGG: mta:Moth_2115 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; PFAM: dihydropteroate synthase DHPS; PRIAM: methionine synthase; SPTR: Q2RGN2 5-methyltetrahydrofolate--homocysteine S-methyltransferase; PFAM: Pterin binding enzyme" /codon_start=1 /transl_table=11 /product="methionine synthase" /protein_id="YP_003827549.1" /db_xref="GI:302391729" /db_xref="GeneID:9512996" /translation="MIIIGELINTSRDEVEPAVKDRDTEFIQELAKKQEEAGADYIDV NCGTLIKEEPEALEWLVKTVQEVVDVPLCIDSPDPEAIKRGLEAHEGKALVNSITAEE DRFQEILPLIQEYDAQIIALVMNEEGMPEDDTDRIETATKLIEDLTAEGIAEDDIYVD PIIQPIGTDEEMGEYILSAIDEITNKYEDVHITCGLSNISHGLPQRKLLNQTFVVLAM SRGMDSAILDPLDEKIMSLAIAADTLLGKDQYCSDYIKAAKSDGLII" misc_feature 1026321..1027004 /locus_tag="Acear_0954" /note="Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a...; Region: Pterin_binding; cl00219" /db_xref="CDD:197403" misc_feature order(1026345..1026347,1026543..1026545,1026606..1026608, 1026612..1026614,1026684..1026686,1026798..1026800, 1026903..1026905,1026915..1026917,1026996..1026998, 1027002..1027004) /locus_tag="Acear_0954" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29544" misc_feature order(1026831..1026833,1026843..1026848,1026954..1026956, 1026966..1026968,1026978..1026980) /locus_tag="Acear_0954" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29544" misc_feature 1026909..1026917 /locus_tag="Acear_0954" /note="inhibitor binding site; inhibition site" /db_xref="CDD:29544" gene 1027196..1028371 /locus_tag="Acear_0955" /db_xref="GeneID:9512997" CDS 1027196..1028371 /locus_tag="Acear_0955" /EC_number="1.1.1.38" /note="COGs: COG0281 Malic enzyme; InterProIPR015884:IPR016040:IPR012301:IPR012302:IPR 001891; KEGG: amt:Amet_2965 malate dehydrogenase; PFAM: malic protein NAD-binding; malic protein domain protein; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating); SPTR: A6TSE7 Malate dehydrogenase (Oxaloacetate-decarboxylating); PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain" /codon_start=1 /transl_table=11 /product="Malate dehydrogenase (oxaloacetate-decarboxylating)" /protein_id="YP_003827550.1" /db_xref="GI:302391730" /db_xref="GeneID:9512997" /translation="MSLKEEALKAHSQHKGKIKVESKIEVKDKDDLSIAYTPGVAEPC KEIDRDIDKVYEYTAKGNLVAIVSDGSAVLGLGNIGPEASLPVMEGKAVLFKEFAGVD AFPLCLDTQNVDEIVETVKRLAPTFGGINLEDISSPRCIEIETRLKEELDLPIFHDDQ HGTAIVVLAGLINALKYTKKELDQTKVVVNGAGSAGIAIAKLLLSAGVKDVIMCDIFG ILHPEEEQMNSIQAEMAEVTNKEQLTGDLASAMEGADVFIGVSAPDIVSQEMVASMAD DAIIFAMANPVPEIRPDAAKEAGAVVVGTGRSDYANQINNVLAFPGIFRGALDVRATD INKEMKIAAAYAIANLISEDELAADYIIPDPFDKRVVSKVAAAVSKAAMESGIAQVK" misc_feature 1027196..1028368 /locus_tag="Acear_0955" /note="Malic enzyme [Energy production and conversion]; Region: SfcA; COG0281" /db_xref="CDD:30629" misc_feature 1027238..1027639 /locus_tag="Acear_0955" /note="Malic enzyme, N-terminal domain; Region: malic; pfam00390" /db_xref="CDD:144108" misc_feature 1027673..1028302 /locus_tag="Acear_0955" /note="NAD(P) binding domain of malic enzyme (ME), subgroup 2; Region: NAD_bind_2_malic_enz; cd05311" /db_xref="CDD:133453" misc_feature order(1027769..1027780,1027838..1027843,1027973..1027978, 1027988..1027990,1028042..1028050,1028111..1028113, 1028135..1028137,1028141..1028143) /locus_tag="Acear_0955" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:133453" gene 1028602..1029792 /locus_tag="Acear_0956" /db_xref="GeneID:9512998" CDS 1028602..1029792 /locus_tag="Acear_0956" /note="COGs: COG1906 conserved hypothetical protein; InterPro IPR007294; KEGG: nth:Nther_0466 protein of unknown function DUF401; PFAM: protein of unknown function DUF401; SPTR: B2A5W9 Putative uncharacterized protein; PFAM: protein of unknown function (DUF401); TIGRFAM: converved hypothetical integral membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827551.1" /db_xref="GI:302391731" /db_xref="GeneID:9512998" /translation="MLSIVGVLIAFGLIIWLLGKEVNLGHAMFLGSIVVAVTSQLSIQ KTVEVFIKGISSESTLELIIIVALIGILAQLMEKTELLTEMIEAYSYIFNQKVIAMFI PSIIGALPIPGGAIMSAPLVKSVGDDMGLNARKEMAVNFLYRHIWGFVFPMMPGLILA AQLTSISMYTLIKLQFPMAIVMGIAGYYSLFKDKEFNKQEKESKSIRKVCSQLLITSL PLLITLIVPLLFNVSLIIGLLMGLLAVIIMKYQKFSWPLLLESIDYELTISIVGIMVF KEFINSGPDLKLLTDLLLSLGLPTMVLITIIPALVGYITGAIISGVGISFPLLLPVID QDPVLVMIMYSAVFFGYFVSPVHFCLILTNEYFGTKIKQVYRDLFWPTVTGLMTLFLL AIVY" misc_feature 1028602..1029786 /locus_tag="Acear_0956" /note="Protein of unknown function (DUF401); Region: DUF401; cl00830" /db_xref="CDD:163914" gene 1029930..1030823 /locus_tag="Acear_0957" /db_xref="GeneID:9512999" CDS 1029930..1030823 /locus_tag="Acear_0957" /note="InterPro IPR000182:IPR016181; KEGG: cce:Ccel_1617 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; PFAM: FR47-like protein" /codon_start=1 /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_003827552.1" /db_xref="GI:302391732" /db_xref="GeneID:9512999" /translation="MEQFVYANEGKVLLREAVQDDIPKIVELFDELPKNDYWQTEELA QGRYDLIDTTGGIICVAVLGEEIIGYTEVVLPDSKDDFGFVTKLQIDDEYKRRKFGTE LVRYGMILTKKKGYVGSVVWPDIDKSKGLYKKIGFKEITDNQKVIFEVKEDLPSVEGE SIKEISSLDEFKELELAVGSQYKVEFIWQRGFELAEEGLLNYNQPLIQKVSVDAGEGV IFFDNRHLFIAVAEEDRDDLDLITDLLQYGSKIAQQEGAEELLTYIHIDDWEEIKSDL EDIWEIKKDETRLEMKMEFED" misc_feature 1029930..1030349 /locus_tag="Acear_0957" /note="Acetyltransferases [General function prediction only]; Region: RimI; COG0456" /db_xref="CDD:30804" misc_feature <1030170..1030367 /locus_tag="Acear_0957" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(1030858..1032627) /locus_tag="Acear_0958" /db_xref="GeneID:9513000" CDS complement(1030858..1032627) /locus_tag="Acear_0958" /note="COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); fibronectin-binding protein A N-terminus (FbpA)" /codon_start=1 /transl_table=11 /product="fibronectin-binding A domain protein" /protein_id="YP_003827553.1" /db_xref="GI:302391733" /db_xref="GeneID:9513000" /translation="MALDGLTLQAIKIELEEELIGGRLDKIYQPKENLLTLRFRQPGE NIKLLLSASPQNPRIHITDSDHENPLRPPTFCMLLRKHLEHGRLRKIEQPDFERILKI YIDSKNNQGEIETKILLIEVMGRHSNIILIDNKNQILDSIKRVTSDMSRHREILPGHE YKKPPKQGKTNPLTVKKDEFIKRIKSADIEKKVYRAIMDNIRGISPLIAKELAYRTGL NKNDKIRKISSISLEKLWPEFKKLIEQIKAEDFEPNLIIEDDKFKAYSVTELTSLSEY QKKKFATANELLDYYFTTKIRLKEITDLKNSLKGVTSDNIEKAMKKYRRVKGQLKGAR NAEKYRIKGELIKANIYRIKPGQTKLEATNYYSDEEETVNIQLDADLSPAENAQKYFK KYDKAKKSVDYLENELRKAKNEVNYLKQVEVLVEQAENIEDLQELKEELTSEGYIKKQ KSKKDSRKNKSKKSEPLKFKSSDGFDIRVGRNNHQNDKLVKYESSDQDLWLHAKDIPG SHVIIKNHTRDEVPQNTIEEAAHLAAYYSKGKNSSNVPVDYALAKHVNKPKGAKPGMV YYENQQTLYVTPQQEIIEEMDQQ" misc_feature complement(1031287..1032618) /locus_tag="Acear_0958" /note="Fibronectin-binding protein A N-terminus (FbpA); Region: FbpA; pfam05833" /db_xref="CDD:147794" misc_feature complement(1030957..1031223) /locus_tag="Acear_0958" /note="Domain of unknown function (DUF814); Region: DUF814; pfam05670" /db_xref="CDD:114396" gene 1032764..1035484 /locus_tag="Acear_0959" /db_xref="GeneID:9513001" CDS 1032764..1035484 /locus_tag="Acear_0959" /note="COGs: COG0474 Cation transport ATPase; InterProIPR006408:IPR001757:IPR018303:IPR004014:IPR 008250:IPR005834:IPR006068:IPR000695; KEGG: hor:Hore_09790 calcium-translocating P-type ATPase, PMCA-type; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase; SPTR: B8CWR6 Calcium-translocating P-type ATPase, PMCA-type; TIGRFAM: calcium-translocating P-type ATPase, PMCA-type; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; sarco/endoplasmic reticulum calcium-translocating P-type ATPase" /codon_start=1 /transl_table=11 /product="ATPase P" /protein_id="YP_003827554.1" /db_xref="GI:302391734" /db_xref="GeneID:9513001" /translation="MEERDDFQAYQLSISDVTTELKTDLETGLLSSQIPARQEKYGPN RLPDQSSPSILGMMLEQFNDFMVWVLIGAVVISGFLGQMDDAIAIIAIVILNAIMGFV QEYRAERSLQALKELAAPEAAVLRDNERKEIPTDELVPGDILYLKPGDKIPADGRIIE SNNLETNEASLTGESITVKKDANRITAEDVALGDRTNMVYMGTTVVKGRAKVVITDIG LETEMGQIANMLQNTEERDTPLQKRLDTLGKWLVYICFLACAAVVGLGVIKGEPIYKM FLSGVSLAVAAIPEGLPAIVTLSLAIGVQRMIKRQAIVRKLPSVETLGCTTVICSDKT GTLTKNEMTIKKIYTDGKTYDLNSEALSAEGVRKSLQIGAICNNAYLKQKSDGMLNQN SWEVMGDPTEGAFLLAARKAGMNKERLQQQFSQLKEVPFSSNRKRMSMIGKRNGENTL YLKGAPDIVLDRCSHYWEDGEVKQLTSNKLNHFKRQNEELSSQALRVLAVAVRKLPKN LDQDRLEKYETDLVLVGLVGMIDPPRPEVKRAIARCKRAGIKPVMVTGDHKNTAQAIA DELNLLNRNDEVVTGSELKQMSEEEFRSRIDRIRVYARVTPEDKLRIVKTLKNRGEVV TMTGDGVNDAPAVKEADIGIAMGEKGTDVTQEASSLILADDNFRTIVAAVEEGRAIYD NIRKFIRYLLSCNIGEILTMFLASLFGFELPLIPIQILWVNLVTDGLPALALGVDPAA EDIMERSPRPPDESIFAHGLKTRIISKGILIGLSTLFAFILGLKISGGSLAEARTMAF TNLVMAQLFFVFSCRSEEYSIFEMNPFSNLHLVVSVIISFIMQLAVLYLPGLKGVFKT TALHQGEWLIILVTAGSATILVEFFEGILHKISSKIQYIRIKNDKNESIS" misc_feature 1032788..1032994 /locus_tag="Acear_0959" /note="Cation transporter/ATPase, N-terminus; Region: Cation_ATPase_N; cl02930" /db_xref="CDD:194483" misc_feature 1032797..1035400 /locus_tag="Acear_0959" /note="Cation transport ATPase [Inorganic ion transport and metabolism]; Region: MgtA; COG0474" /db_xref="CDD:30822" misc_feature 1033058..1033729 /locus_tag="Acear_0959" /note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122" /db_xref="CDD:189402" misc_feature 1034360..1034701 /locus_tag="Acear_0959" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature 1034426..1034428 /locus_tag="Acear_0959" /note="motif II; other site" /db_xref="CDD:119389" misc_feature 1034894..1035406 /locus_tag="Acear_0959" /note="Cation transporting ATPase, C-terminus; Region: Cation_ATPase_C; pfam00689" /db_xref="CDD:189671" gene 1035646..1036116 /locus_tag="Acear_0960" /db_xref="GeneID:9513002" CDS 1035646..1036116 /locus_tag="Acear_0960" /note="COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: hmo:HM1_1703 purine-binding chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: C0GM57 CheW protein; PFAM: CheW-like domain" /codon_start=1 /transl_table=11 /product="CheW protein" /protein_id="YP_003827555.1" /db_xref="GI:302391735" /db_xref="GeneID:9513002" /translation="MSEETQQLIVFNLSGEEFGVKITKVQEIIRMKEITELPNSSEFM AGIINLRGDIISVIDLRNKFGVTQEETKKTRIIIVEMDDQDVGLIVDSVSEVLRINSE NIEDAPDRIAGIKQDYLKGIGKIDERIIILLDLDKLLTAEEKIELENIDENVEA" misc_feature 1035661..1036014 /locus_tag="Acear_0960" /note="CheW-like domain. CheW proteins are part of the chemotaxis signalling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and...; Region: CheW_like; cl00256" /db_xref="CDD:185867" gene 1036157..1038157 /locus_tag="Acear_0961" /db_xref="GeneID:9513003" CDS 1036157..1038157 /locus_tag="Acear_0961" /note="COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207:IPR003594:IPR002545:IPR005467:IPR 009082:IPR010808:IPR004105:IPR004358; KEGG: hmo:HM1_2247 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; SPTR: A1HMP8 CheA signal transduction histidine kinases; PFAM: P2 response regulator binding domain; CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain" /codon_start=1 /transl_table=11 /product="CheA signal transduction histidine kinase" /protein_id="YP_003827556.1" /db_xref="GI:302391736" /db_xref="GeneID:9513003" /translation="MDMEELQELYVTEAEEHLEVLNRSLLDLEDNPHNLDIIKELFRA AHTLKGMAGTMGFEEVSNLTHAMENILDKLRNEEMKVTTEIMNLLFKSVDTLEILANE GEEALGYDLDEVISELKAYASGEIEANESASPEADIGTEIGGTYSLQLTDEEIEELND KLTDESAIYMLNVILEEDCVFGSLRAKMVVNELESYGELIKGRPELKNIEEKEVEEKF HIIFISETDKEGILNSLNRISEIESIELEEVEGVEELKASETEEKEKKDKQDSSPSKS SLSSKLRSSSKIKVDVDRLDDLMNLVAELVIKRTQVESIGLDYELDELNKKLKSLGKV TSELQDEVMNMRMVPINLVFNRFPRLVRDLSQELGKEINLEIEGEDTELDRTIIDEIG DPLVHILRNASDHGIESPEERKEAGKDPEGTIKLSAFHEGNNVVIEIKDDGGGINPEH IKQKAVDNGVISREESQKMSDKEIINLIFASGFSTVEDVSDVSGRGVGMDVVKNKIES LSGSVDIASEVGKGTTFTIKLPLTLAIIQGFLINIADQKYVLPLETIQEIVKVKPDNI KTVNQQEVIQRRGTVIPLISLREELNKPGYEEDPDHISVVIIEIDQEYYGFTVDSIVG QQEVVIKRINDLADEVKKIAGATILGDGSVALIIDVEEITNY" misc_feature 1036163..1036459 /locus_tag="Acear_0961" /note="Histidine Phosphotransfer domain, involved in signalling through a two part component systems in which an autophosphorylating histidine protein kinase serves as a phosphoryl donor to a response regulator protein; the response regulator protein is...; Region: HPT; cd00088" /db_xref="CDD:28972" misc_feature order(1036292..1036294,1036301..1036306,1036349..1036351, 1036358..1036360) /locus_tag="Acear_0961" /note="putative binding surface; other site" /db_xref="CDD:28972" misc_feature 1036292..1036294 /locus_tag="Acear_0961" /note="active site" /db_xref="CDD:28972" misc_feature 1036661..1036870 /locus_tag="Acear_0961" /note="P2 response regulator binding domain; Region: P2; pfam07194" /db_xref="CDD:148665" misc_feature 1037024..1037191 /locus_tag="Acear_0961" /note="Signal transducing histidine kinase, homodimeric domain; Region: H-kinase_dim; pfam02895" /db_xref="CDD:190468" misc_feature 1037327..1037743 /locus_tag="Acear_0961" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(1037345..1037347,1037357..1037359,1037366..1037368, 1037471..1037473,1037477..1037479,1037483..1037485, 1037489..1037494,1037642..1037653,1037699..1037701, 1037705..1037707,1037720..1037725,1037729..1037731) /locus_tag="Acear_0961" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 1037357..1037359 /locus_tag="Acear_0961" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(1037483..1037485,1037489..1037491,1037642..1037644, 1037648..1037650) /locus_tag="Acear_0961" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature 1037753..1038145 /locus_tag="Acear_0961" /note="CheA regulatory domain; CheA is a histidine protein kinase present in bacteria and archea. Activated by the chemotaxis receptor a histidine phosphoryl group from CheA is passed directly to an aspartate in the response regulator CheY. This signalling...; Region: CheA_reg; cd00731" /db_xref="CDD:29681" gene 1038185..1038547 /locus_tag="Acear_0962" /db_xref="GeneID:9513004" CDS 1038185..1038547 /locus_tag="Acear_0962" /note="COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: hor:Hore_10620 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8CWZ8 Response regulator receiver protein; PFAM: Response regulator receiver domain" /codon_start=1 /transl_table=11 /product="response regulator receiver protein" /protein_id="YP_003827557.1" /db_xref="GI:302391737" /db_xref="GeneID:9513004" /translation="MAKEILIVDDAQFMRTMLSKLVEEDGYKVVGEAVDGKDAIEKYK ELEPDLVTMDITMPEMDGIEAMEHIKDFDPDADIIVCSAMGQKPMVVDALEAGAKDFI VKPIKPEKVKEALANILG" misc_feature 1038197..1038529 /locus_tag="Acear_0962" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature 1038200..1038541 /locus_tag="Acear_0962" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(1038209..1038214,1038344..1038346,1038368..1038370, 1038428..1038430,1038485..1038487,1038494..1038499) /locus_tag="Acear_0962" /note="active site" /db_xref="CDD:29071" misc_feature 1038344..1038346 /locus_tag="Acear_0962" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(1038353..1038358,1038362..1038370) /locus_tag="Acear_0962" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 1038494..1038502 /locus_tag="Acear_0962" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" gene 1038570..1039640 /locus_tag="Acear_0963" /db_xref="GeneID:9513005" CDS 1038570..1039640 /locus_tag="Acear_0963" /EC_number="3.1.1.61" /note="COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterProIPR001789:IPR008248:IPR000673:IPR010916:IPR 011006; KEGG: rci:LRC570 chemotaxis methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; SPTR: Q0W7Z3 Chemotaxis methylesterase; PFAM: CheB methylesterase; Response regulator receiver domain" /codon_start=1 /transl_table=11 /product="response regulator receiver modulated CheB methylesterase" /protein_id="YP_003827558.1" /db_xref="GI:302391738" /db_xref="GeneID:9513005" /translation="MSSLIRVLVVDDSAFMRKVISEMLDTDSIEVIATARNGEDALKK LEEYEPDLITLDVEMPKMDGLEFLRKIMPERSLPVIMLSTLTNENDTTTIEALELGAV DFIPKPSGSISLDIDKVEEKLIEKVKVAAECNIENCNTKKTNLTDTNQSTTFSREDRR LNRESKNDDEVVIIGASTGGPKALKEVMTKISSDFSIGILVVQHMPPNFTASLAQRLD RLSQIKVKEAEEGDMIKPGQALLAPGDYNMLVTKGGKITLSQNKKLHNVRPAIDLTME SAVKYYGSQTLGVVLTGMGKDGTRGLKAIKSAGGYTIAQDEKTSVVYGMPRSAYEAGV VNSVKPLPQISDEIVRLSKKLK" misc_feature 1038582..1039631 /locus_tag="Acear_0963" /note="chemotaxis-specific methylesterase; Provisional; Region: PRK00742" /db_xref="CDD:179106" misc_feature 1038591..1038893 /locus_tag="Acear_0963" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(1038600..1038605,1038735..1038737,1038759..1038761, 1038816..1038818,1038879..1038881,1038888..1038893) /locus_tag="Acear_0963" /note="active site" /db_xref="CDD:29071" misc_feature 1038735..1038737 /locus_tag="Acear_0963" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(1038744..1038749,1038753..1038761) /locus_tag="Acear_0963" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 1038888..1038893 /locus_tag="Acear_0963" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 1039080..1039622 /locus_tag="Acear_0963" /note="CheB methylesterase; Region: CheB_methylest; pfam01339" /db_xref="CDD:144802" gene complement(1040228..1042615) /locus_tag="Acear_0964" /db_xref="GeneID:9513006" CDS complement(1040228..1042615) /locus_tag="Acear_0964" /EC_number="5.99.1.3" /note="COGs: COG0188 type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterProIPR005743:IPR002205:IPR013760:IPR006691:IPR 013758:IPR013757; KEGG: hor:Hore_11750 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: B8CXA6 DNA gyrase subunit A; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit" /codon_start=1 /transl_table=11 /product="DNA gyrase, A subunit" /protein_id="YP_003827559.1" /db_xref="GI:302391739" /db_xref="GeneID:9513006" /translation="MIEQEITSVPIEEKMKESYLNYSLSVIISRALPDVRDGLKPVHR RILYATKKLGLIPNKPHKKSARIVGEVLGKYHPHGDAAVYDAMVRMAQYFSQRYKLID GHGNFGSIDGDSAAAMRYTEARLAPLSEELLADIEKETINFVDNFDGSLQEPTVLPSR VPNLLVNGSSGIAVGMSTDIPPHNLKEVISALIQLLEDQDLTIEDLMEYIPGPDFPTG GKIIGNDEIKKAYRTGKGRITLRGKTKIEKRSRNCERIVITEIPYQLNKAKLIEEIAN TIKKGKVDNVTNVRDESDQDGLRIVIELKSKANTEIILNRLYKYTSLQTTQRINMLAL VDQQPEVMDLKTILQHFLDFRREVVTRRTEFELQKSKDRQHILLGLKEAIDNLDKVIS IIRNSQKPSTAKKNLQDKLNVSKKQAAAILDMKLQRLVSLERKKITEELTELKEKIEA LNSILNEKEVMDDLIKKELIEIKEEYGDERKTEIITDESKAELDESDLIKNEDIVLSF SYNKYLKRTTDIENIRAGKGDYITDIMTGTTRDDLLFFTNTGQVHILKTHKIPEHHGL STGDPLSDYLKLPLDEEIVDILILTDETKEKYITIATEEGLIKKTVGKEYETTVSSIK AINLNEEDEVIGAKVTDGQQNLLLGTKGGQTIHFSEDSISDTGRNTKGSKGIDLAEND KVISFNLTANSNYVITATADGRATRTDINAYQIQNRNGKGLKTLTNDSYEVIDIITAS KEDKLLFVTEEGQLEEAPVSEITETERVGRMYTQFKLDDDKIKEVIRLPQLNKTE" misc_feature complement(1040249..1042609) /locus_tag="Acear_0964" /note="DNA gyrase subunit A; Validated; Region: PRK05560" /db_xref="CDD:180128" misc_feature complement(1041227..1042534) /locus_tag="Acear_0964" /note="DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC), bacterial DNA gyrases (A subunit, GyrA),mammalian DNA toposiomerases II. DNA topoisomerases are essential enzymes that regulate the conformational changes in...; Region: TOP4c; cd00187" /db_xref="CDD:29149" misc_feature complement(order(1042145..1042147,1042154..1042225, 1042229..1042285,1042289..1042438,1042451..1042534)) /locus_tag="Acear_0964" /note="CAP-like domain; other site" /db_xref="CDD:29149" misc_feature complement(1042256..1042258) /locus_tag="Acear_0964" /note="Active site [active]" /db_xref="CDD:29149" misc_feature complement(order(1041311..1041361,1041410..1041415, 1041437..1041448,1041455..1041463)) /locus_tag="Acear_0964" /note="primary dimer interface [polypeptide binding]; other site" /db_xref="CDD:29149" misc_feature complement(1040555..1040686) /locus_tag="Acear_0964" /note="DNA gyrase C-terminal domain, beta-propeller; Region: DNA_gyraseA_C; pfam03989" /db_xref="CDD:190822" gene 1042841..1043302 /locus_tag="Acear_0965" /db_xref="GeneID:9513007" CDS 1042841..1043302 /locus_tag="Acear_0965" /note="KEGG: nth:Nther_0724 hypothetical protein; SPTR: B2A7C0 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827560.1" /db_xref="GI:302391740" /db_xref="GeneID:9513007" /translation="MILKDSAVTGAIAGLIGNIPKTVITNLFQSLGWTRYNFGQISAG YFVKEEVVSNSIAVVTGYIADYILAMLLGVVIVYLFRIMGNDYPVFKGLLFGGVSYIF LYGVAMALNFTRVSLLTPLPNLVLLVPHVVFGATTAWVVNYLMAKNTLEEG" gene 1043382..1043771 /locus_tag="Acear_0966" /db_xref="GeneID:9513008" CDS 1043382..1043771 /locus_tag="Acear_0966" /note="KEGG: nth:Nther_0724 hypothetical protein; SPTR: B2A7C0 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827561.1" /db_xref="GI:302391741" /db_xref="GeneID:9513008" /translation="MMSIFKYLGLVKYNFTQMTAGIFVRESALSSPFALAVGLVSDFA VASLLGIILVYIMRMTGKDYPISKGFLYGVMIHIVVYGLAKTLNITSVELLNPVSNFI VLFPNITFGIFSALFIERYGILEVGTT" gene 1043826..1044554 /locus_tag="Acear_0967" /db_xref="GeneID:9513009" CDS 1043826..1044554 /locus_tag="Acear_0967" /note="COGs: COG2323 membrane protein; InterPro IPR007353; KEGG: hor:Hore_05340 predicted membrane protein; PFAM: protein of unknown function DUF421; SPTR: B8D265 Predicted membrane protein; PFAM: protein of unknown function (DUF421)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827562.1" /db_xref="GI:302391742" /db_xref="GeneID:9513009" /translation="MPFWESQQVLTAYQWIFRAVVVFTWLFVMTKLMGQREIGRLTLF DFVIAITIGSVSAGSLGNSQTDLNGVLLTTGTLALLNIIIAVLALKSLTFRRIVQGEP LVLIQNGKLLEDTMRKARINVDDLLMGLRRNKVPNLSDVEFAVLEPNGKISVIPKSQS RNVKPKDLNIDTNYEGFPTVVIEDGNILKDNLQENNLDVDWLKGELENQGVEDKDKVL AAMLDTQGRLYISKKNQKNEELIH" misc_feature 1043871..1044533 /locus_tag="Acear_0967" /note="Protein of unknown function (DUF421); Region: DUF421; cl00990" /db_xref="CDD:193999" gene complement(1044557..1045153) /locus_tag="Acear_0968" /db_xref="GeneID:9513010" CDS complement(1044557..1045153) /locus_tag="Acear_0968" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827563.1" /db_xref="GI:302391743" /db_xref="GeneID:9513010" /translation="MNFESLSAIATLLSALATLFMVHIFREQLKQEWRAVPVIIRPPL NTTNEESTNLREKHLLLKNLGGGPALNVSLYLAPNEFEFKVEKSPELKLSRPLAPNIM YEVQIIGVKTEEAEKNSSISDKVSFNKKFNESEEVIPALVFESDQVIDLPNDINAVIT FEDINRQKRWVKYTGEGLENAKQTYGEEMPGFLKQNSN" gene 1045315..1047228 /locus_tag="Acear_0969" /db_xref="GeneID:9513011" CDS 1045315..1047228 /locus_tag="Acear_0969" /EC_number="5.99.1.3" /note="COGs: COG0187 type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR011557:IPR003594:IPR001241:IPR018522:IPR 013760:IPR020568:IPR013506:IPR006171:IPR002288:IPR000565:I PR013759; KEGG: hor:Hore_11740 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: B8CXA5 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit B" /protein_id="YP_003827564.1" /db_xref="GI:302391744" /db_xref="GeneID:9513011" /translation="MTLQKELDYNAEQIQVLEGLEAVRKRPGMYIGSTGTKGLHHLVW EAVDNSIDEFLAGHGEEIKVKIKEGSIISVEDQGRGIPVEVHPDKKLPAAQLVLTTLH AGGKFDSSGYKVSGGLHGVGISVVNALSEWLELTIWRNGYTYTQQYEKGVPVTEFEKS NSTTKTGTKIEFKPDEDIFDNVKYKFDVLANRLQESAFLNKGLKISLVDTRPGLEKEV TYQYDGGLEAFIDYLNQDRDLLHDDIVYLEEEVDDTYVEVAFQYNKSFNERIYSFANN INTHDGGYHLTGFKTALTRAFNNYAKDNNLLKKSDPKLTGRDLREGLTAVVNVKLTEP QFEGQTKAKLGNSEIRSVVEGAVYNYLNQYLPRHHDMAKEVINKALEAVKARKAAKKA KELTKRKGVLNNNSLPGKLSDCSSRKSEESELYLVEGDSAGGSAKQGRNRDFQAILPL KGKILNVERARLNKIINNNEIAAIITALGTGIGEEFNIDKLRYHKIIIMTDADVDGAH ICTLILTLFYRYMPELIREGHVYVAQPPLYKVTYRGDEEYIYTDKQLQKYLADLDRSK VSIQRYKGLGEMNPSQLWETTMNPENRKLQEIMVDEEREADSIFTRLMGSKAKLRREF IMANADLASNLDV" misc_feature 1045324..1047225 /locus_tag="Acear_0969" /note="DNA gyrase subunit B; Validated; Region: gyrB; PRK05644" /db_xref="CDD:180181" misc_feature 1045429..1045728 /locus_tag="Acear_0969" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(1045447..1045449,1045459..1045461,1045468..1045470, 1045534..1045536,1045540..1045542,1045546..1045548, 1045552..1045557,1045672..1045683) /locus_tag="Acear_0969" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 1045459..1045461 /locus_tag="Acear_0969" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(1045546..1045548,1045552..1045554,1045672..1045674, 1045678..1045680) /locus_tag="Acear_0969" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature 1045984..1046445 /locus_tag="Acear_0969" /note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having a ribosomal S5 domain 2-like fold, of the type found in proteins of the type IIA family of DNA topoisomerases similar to the B subunits of E. coli DNA gyrase and E. coli Topoisomerase IV which are...; Region: TopoII_Trans_DNA_gyrase; cd00822" /db_xref="CDD:48467" misc_feature 1046137..1046139 /locus_tag="Acear_0969" /note="anchoring element; other site" /db_xref="CDD:48467" misc_feature order(1046311..1046313,1046320..1046325,1046329..1046331) /locus_tag="Acear_0969" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48467" misc_feature order(1046329..1046331,1046335..1046337) /locus_tag="Acear_0969" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:48467" misc_feature 1046578..1046919 /locus_tag="Acear_0969" /note="Topoisomerase-primase domain. This is a nucleotidyl transferase/hydrolase domain found in type IA, type IIA and type IIB topoisomerases, bacterial DnaG-type primases, small primase-like proteins from bacteria and archaea, OLD family nucleases from...; Region: TOPRIM; cl00718" /db_xref="CDD:193916" misc_feature order(1046596..1046601,1046608..1046610,1046815..1046817, 1046821..1046823,1046827..1046829) /locus_tag="Acear_0969" /note="active site" /db_xref="CDD:173773" misc_feature order(1046596..1046598,1046815..1046817) /locus_tag="Acear_0969" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173773" misc_feature 1047004..1047192 /locus_tag="Acear_0969" /note="DNA gyrase B subunit, carboxyl terminus; Region: DNA_gyraseB_C; pfam00986" /db_xref="CDD:189792" gene 1047665..1052272 /locus_tag="Acear_0970" /db_xref="GeneID:9513012" CDS 1047665..1052272 /locus_tag="Acear_0970" /note="COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR011335; KEGG: nth:Nther_0834 hypothetical protein; SPTR: C6QR73 Putative uncharacterized protein; PFAM: Putative ATPase (DUF699); protein of unknown function (DUF559)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827565.1" /db_xref="GI:302391745" /db_xref="GeneID:9513012" /translation="MQPESVDRTNKIFDYLDDIVRLGHKVVHRLEDHNNFLLYQNKLP VTENVKANDLFYQLQSSLLEIKRCDLPERPEIPKNLNNWIKFSSALDSEPEIIFKRKM FNNQKQECFYDIPERPLIFKEYKEKLETWIKEVEPLKKSRELFDELFSVSKTLRYEEN LELILGYGILHWKKDNKLIKYPLLTQKAIIEHEAKKDKIIVKTPDDAMWDLELESLID VGISDLGDIRDKFDEIKYNYDFEEGNPYLNLFYEATGITPDGKLIKDIEDASLKPNEN LRIVNGWTLFVRKRNQNELIEDIRAFNEQLKENNITLPNSLQSLVEDPDETTVNWDKS EFHDEWTGLLDNDILFPKEANEEQIQILDCLQKSNGVIVQGPPGTGKSHTIANLISHF MAHGQRVLVTSQKDQALKVLRDMIPESLKSLCISVLQNDVNRKQKLEKAVSYISEIVS KEDYSKLKEKANDLEEKFVTLKKRLQKISTKLKRLAEAELPIITDNMKYSLSPAEVAK KIEQEDKYQWFTDHPSYKTTRAIIDNEDVIKLEDEFPLTDDEFEELKVLRQNLLPKLD ELSTYQLPDTDNLLTPEEFKDMAQNLEKIYQLEQKADDYFPNLVLKEDVQKNTIDLIE KGIKVYNVIEASWAKRLIDDASEFKEQLNDALDTLGTIYENINKLHKSIGLITSIELD ENVSLDKYKEFVDSALERVNQAKKPWKWFSLFDGGEKKALQEIRFNGQQPNNQEEWEK VKDYIKLKLKVNKFVQFWSGLKDNFASYLPDLSQQADFQQVEKVYQKLESAFNYKYEL RLKLKNELSKVIIGEDKVLEERLEEELENIYQALKIKLEQREFIEAEQIFTDLKENLA VLQQRNAHPIVDELIDCLPDEIHVVKEKVAKWKNNYEQLKEIEEFLPDYNKFKELVDK LSTQASNWAEQWMNPEYTLEDLNISVWEEAWEEAILESYLEDISNKEDKISKLEAEQD KFQQQIKKAKENLVLTKTKLRLKDSITDSDLMSLNKWKKAVKRYGKGTGKYAPKWRRE MQKHMQEAKDAIPAWIMPIYRVSETIPKEFGCFDVLIIDEASQCDIRSLLALCRAEKV IIVGDDQQISPSAVGVPHDKVDAFIKQHLDDLPHNTMMDLKTSLYDIGEIIFNAQSRL MLKEHFRCVPEIIEFSNRLCYNNEILPLRNVPDSEKLKPTLESNFVAEGYINDRGKIN KPEAEAICKKVKELAEDPRYKDKTFGVISLKGKKQAKYIFDEIDNYLTSQQLAEHDFL AGDAYTFQGDERDVIILSLVVANNRRFRALTKESAQQRFNVAVSRAKDQLILFHSVEL GADLNNKEDMRYKLLNYIQNGSIEREELENPKELCDSVFEKDVYDWLTERGYKVTPQV EVGNYRIDLVVEGRKNRLAVECDGDRWHPPEKWWEDRMRQRQLERVGWTFWRVSGTTF YSNPDEAMQSIIPRLKELNIEPLLKKEKEQINKLEKNLNQKDEVANNFTPDDVVEGPH GNRGKIIAVESDNLLVEVGPNKKEKWKMQNCSFIKQDKVTC" misc_feature <1048712..>1049134 /locus_tag="Acear_0970" /note="DNA helicase, putative; Region: TIGR00376" /db_xref="CDD:188047" misc_feature 1048727..>1048894 /locus_tag="Acear_0970" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cl14882" /db_xref="CDD:197446" misc_feature 1049432..1051615 /locus_tag="Acear_0970" /note="Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair]; Region: COG1112" /db_xref="CDD:31309" misc_feature 1051730..1051972 /locus_tag="Acear_0970" /note="Superfamily of nucleases including Short Patch Repair (Vsr) Endonucleases, archaeal Holliday junction resolvases, MutH methy-directed DNA mismatch-repair endonucleases, and catalytic domains of many restriction endonucleases, such as EcoRI, BamHI, and...; Region: Restriction_endonuclease_like; cl00277" /db_xref="CDD:185879" misc_feature order(1051742..1051744,1051820..1051822,1051859..1051861, 1051865..1051867) /locus_tag="Acear_0970" /note="putative active site [active]" /db_xref="CDD:29959" gene complement(1052343..1053251) /locus_tag="Acear_0971" /db_xref="GeneID:9513013" CDS complement(1052343..1053251) /locus_tag="Acear_0971" /note="InterPro IPR001584:IPR012337; KEGG: gtn:GTNG_3490 IS1477 transposase; PFAM: Integrase catalytic region; SPTR: B4BS96 Integrase catalytic region; PFAM: Integrase core domain" /codon_start=1 /transl_table=11 /product="Integrase catalytic region" /protein_id="YP_003827566.1" /db_xref="GI:302391746" /db_xref="GeneID:9513013" /translation="MKIINSLKTDYTISELCRTFNIARSTYYYRQNSNDNQENNTKNK LYTGHHAYDKDGNLVPEHKVISLVKEYCNEFPHLGYRMVTNYLNYEKELKVNHKRIYR IMKVLDLLQEQIVPKPKNYQLKQKHELTGPNQLWEMDMVQMYIDENGQWVYMFDIIDV YTREIVGHYQSLRCRTKEALAALEQATDNRNTENLTLRTDNGTQFKSREFQRKLNELD ISHERTTVNTPEENAHIESFHGTLKRSEIYRNHYSDITHCRKSIDKFIDRYNNRRPHS SVGKMPPAVYHKNILNNLVSRVKFAV" misc_feature complement(1052364..1053194) /locus_tag="Acear_0971" /note="putative transposase OrfB; Reviewed; Region: PHA02517" /db_xref="CDD:177368" misc_feature complement(1052520..1052864) /locus_tag="Acear_0971" /note="Integrase core domain; Region: rve; cl01316" /db_xref="CDD:194099" gene complement(1053253..1053552) /locus_tag="Acear_0972" /db_xref="GeneID:9513014" CDS complement(1053253..1053552) /locus_tag="Acear_0972" /note="InterPro IPR002514; KEGG: tye:THEYE_A0837 ISCc3, transposase OrfA; PFAM: transposase IS3/IS911 family protein; SPTR: B5YKB3 ISCc3, transposase OrfA; PFAM: transposase" /codon_start=1 /transl_table=11 /product="transposase IS3/IS911 family protein" /protein_id="YP_003827567.1" /db_xref="GI:302391747" /db_xref="GeneID:9513014" /translation="MPKSYDPELKMEIVLRVLKDENISDLVEEYDVSRNSIYAWKKEF LDGGMSKLNGESPTEQEAKLKEKDKQIQEMQKIIGQQKVQMEILKKSPGRIKYRR" misc_feature complement(1053334..1053549) /locus_tag="Acear_0972" /note="Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed...; Region: HTH_Hin_like; cl01116" /db_xref="CDD:186341" gene 1054132..1055079 /locus_tag="Acear_0973" /db_xref="GeneID:9513015" CDS 1054132..1055079 /locus_tag="Acear_0973" /note="InterPro IPR002559; KEGG: csc:Csac_2323 transposase, IS4 family protein; PFAM: transposase IS4 family protein; SPTR: C5VPC1 transposase, IS4 family protein; PFAM: transposase DDE domain; transposase domain (DUF772)" /codon_start=1 /transl_table=11 /product="transposase IS4 family protein" /protein_id="YP_003827568.1" /db_xref="GI:302391748" /db_xref="GeneID:9513015" /translation="MIISPEELKENTFYQICSKLDEIYYTKFSPQENQGRGRPKKYSD LQMIKCLLYKVKNKIYCLRELESKLKEDLLALGIIKLNDVPDHSTFALRFNQLEKMKF NILFQSVIKELNPDTRITSIDATALRSSKNDSDAKLGVSTNLGRYKGYKLHLIASNDS IPLSFKFTTGNVYDNTFDYCKEIMEPLGEHDIFILLGDAAYDSTKLFKLADDLGFKLL TDINYRNADSIDDFTDKCRIENGIYFNSPMGEKMYKNRLTIERSFSILKERYNLEAPR LYGFKRYRSHVMWTLLLYLIEKLIDKENGITDNKFSWNR" misc_feature 1054474..1055019 /locus_tag="Acear_0973" /note="Transposase DDE domain; Region: DDE_Tnp_1; pfam01609" /db_xref="CDD:144990" gene 1055175..1055324 /locus_tag="Acear_0974" /pseudo /db_xref="GeneID:9513016" gene 1056245..1056523 /locus_tag="Acear_0975" /db_xref="GeneID:9513017" CDS 1056245..1056523 /locus_tag="Acear_0975" /note="KEGG: wri:WRi_010330 RNA-directed DNA polymerase (reverse transcriptase); SPTR: Q64B18 Retron type reverse transcriptase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827569.1" /db_xref="GI:302391749" /db_xref="GeneID:9513017" /translation="MELQVKDTPSGIRTREKVRTKLTRITQRARKDKEAKFCALGHLM YKSTLREAFRRLSRTAALGIDGETKESYEENLAENIDNLYKSLKNNSL" gene 1056900..1057379 /locus_tag="Acear_0976" /db_xref="GeneID:9513018" CDS 1056900..1057379 /locus_tag="Acear_0976" /note="COGs: COG1142 Fe-S-cluster-containing hydrogenase components 2; InterPro IPR017896:IPR017900:IPR001450:IPR000813; KEGG: swo:Swol_1704 4Fe-4S ferredoxin, iron-sulfur binding; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q0PID9 Fe-S cluster-containing protein; PFAM: 4Fe-4S binding domain" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003827570.1" /db_xref="GI:302391750" /db_xref="GeneID:9513018" /translation="MNKILMIDPDKCSSCKNCELICSFYHEQEFNPAKSRVQALTWER IGVGIPMMCMHCEDAACMEVCPVDAIYRDVETGAVLVDHDRCFGCKLCVSACPFGNVT YNLETKQVIKCDLCGGEPQCVEFCPSNAIEYKEDSSINRNKKLAVAEKFKDLFEEVE" misc_feature 1056900..1057331 /locus_tag="Acear_0976" /note="Fe-S-cluster-containing hydrogenase components 2 [Energy production and conversion]; Region: HycB; COG1142" /db_xref="CDD:31337" gene 1057380..1059206 /locus_tag="Acear_0977" /db_xref="GeneID:9513019" CDS 1057380..1059206 /locus_tag="Acear_0977" /EC_number="1.2.7.5" /note="COGs: COG2414 aldehyde:ferredoxin oxidoreductase; InterPro IPR013983:IPR001203:IPR013985; KEGG: swo:Swol_1703 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase; PRIAM: aldehyde ferredoxin oxidoreductase; SMART: aldehyde ferredoxin oxidoreductase; SPTR: Q0AWA3 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase, N-terminal domain; aldehyde ferredoxin oxidoreductase, domains 2 & 3" /codon_start=1 /transl_table=11 /product="aldehyde ferredoxin oxidoreductase" /protein_id="YP_003827571.1" /db_xref="GI:302391751" /db_xref="GeneID:9513019" /translation="MYSWTGKLLRINLTERTSTVESLSCEDAEEYLGGRGLGTKIMMD EVAPEVDPLSADNKLIFATGVLTGTIAPSSGRYMVITKGPLTGTIACSNSGGFFGAEL KYAGYDAVIIEGEADRPVYLWIYNDQVEIRDAEDFWGETTHDTTDMIRGETNEEAKVS CIGPAGENLVKMACIMNEMNRAAGRTGVGAVMGSKNLKAVAVRGTNGVTVADNEGFMD TVRKARQMIEEHPVGGEGLPTYGTNILVNILNESGGLPVNNFRDSGVFEMADKIGGET LAEENLIRNKGCYSCIIRCGRVTKVTDPEYKGIGEGPEYEAAWGYGADCGVDNLNIIT KANHLCNELGLDAISMPTTIACAMELYEEGYISQEEVDYDLCFGKEEILVELTRKTAY REGFGDELAEGSYRMAEKYGHPELSMSIKKQEMPAYDPRTLQGIGLEYATSNRGGCHV RGYTTSPEILGVPEKIDPNATEGKAKWCVTMQDLTAALDASGFCLFSTFGLDADIMAE LLSTATGLDLSTEDFIKIGERIWNLEKIFNLAAGFTKEDDTLPPRILEEPQKTGPYKG EVNRLDEMLPDYYELRGWNEESIPTIEKMEELNLEEYYQSLE" misc_feature 1057380..1059188 /locus_tag="Acear_0977" /note="Aldehyde:ferredoxin oxidoreductase [Energy production and conversion]; Region: COG2414" /db_xref="CDD:32549" misc_feature 1057389..1057994 /locus_tag="Acear_0977" /note="Aldehyde ferredoxin oxidoreductase, N-terminal domain; Region: AFOR_N; cl08354" /db_xref="CDD:158266" misc_feature 1058025..1059179 /locus_tag="Acear_0977" /note="Aldehyde ferredoxin oxidoreductase, domains 2 & 3; Region: AFOR_C; pfam01314" /db_xref="CDD:189938" gene 1059290..1059568 /locus_tag="Acear_0978" /db_xref="GeneID:9513020" CDS 1059290..1059568 /locus_tag="Acear_0978" /note="InterPro IPR010038:IPR016155:IPR003749:IPR012675; KEGG: tvo:TVN0794 molybdopterin converting factor, small subunit; PFAM: thiamineS protein; SPTR: C4EUS9 MoaD family protein; TIGRFAM: MoaD family protein; PFAM: ThiS family; TIGRFAM: MoaD family protein, archaeal" /codon_start=1 /transl_table=11 /product="MoaD family protein" /protein_id="YP_003827572.1" /db_xref="GI:302391752" /db_xref="GeneID:9513020" /translation="MILQINFFATFRKVTGNKQYDYQGSVENIKELLLELSDNFGTEF REMVLVGEELSPEVIILVNGINIEHLAQEETELNDKDKVSIFPVVAGG" misc_feature 1059299..1059565 /locus_tag="Acear_0978" /note="Ubiquitin-like proteins; Region: UBQ; cl00155" /db_xref="CDD:193685" misc_feature order(1059386..1059388,1059464..1059466,1059551..1059553) /locus_tag="Acear_0978" /note="charged pocket; other site" /db_xref="CDD:176352" misc_feature order(1059470..1059481,1059545..1059550) /locus_tag="Acear_0978" /note="hydrophobic patch; other site" /db_xref="CDD:176352" gene 1059859..1061814 /locus_tag="Acear_0979" /db_xref="GeneID:9513021" CDS 1059859..1061814 /locus_tag="Acear_0979" /note="COGs: COG3284 transcriptional activator of acetoin/glycerol metabolism; InterProIPR000014:IPR003593:IPR002078:IPR009057:IPR 003018:IPR013767:IPR002197:IPR020441; KEGG: ppd:Ppro_0885 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; SPTR: C6MRV0 GAF modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box" /codon_start=1 /transl_table=11 /product="GAF modulated sigma54 specific transcriptional regulator, Fis family" /protein_id="YP_003827573.1" /db_xref="GI:302391753" /db_xref="GeneID:9513021" /translation="MERNVEQITEAWQTYVLQGKVNDKLDTSIKRSWQRCSEYEINPF QESNDCVLQANNLQEKLEEYEEIIRVATPIMKELHQSIKGSNFIVVLTDNQGHVLKSI GDDSFMPKAQKVYLIEGASWHEKVKGTNAIGTVIEEESPLNVYASEHFFQENHFLTCS AAPIFDADDNFIGVIDISGDYHSAQRHTLGMVVAAASAIQRQLLLQHLERELMISEKQ KELILNSTAEGFFTVNNEGVITQINQKGSQLLGYAPQECIGKKFETFFPESTFSSLMK LTTDGTEKSKEMVWNLKQKRLQVTSKVINEEEEVTGLVIKINDFSAQKKSETKKEQKT DYSFSDIIGQSREIRKMIRIAQKVANSDSTILLTGESGTGKELFAQAIHNYSSRQDKE FVPINCGAIPEDLMESELFGYQDGAFTGAKRGGKPGKFELADDGTIFLDEIGELNFSA QVKLLRVLQERKVSRLGSNELIPVDVRIIAATNKNLKERIKTGDFREDLYYRLNVINL ELPPLRERGEDIIILAEYFIEKLGMALGKYNVKLSEPVKKTFKNYNWPGNIRELKNGI ESALNLIEGLVIKKEHIPDYLGTETDLQSQHYSIDDELLSLKEAEARAIRKALKYFEG NISRAARHLEIGRNTLYRKIEKYGINI" misc_feature 1059883..1061805 /locus_tag="Acear_0979" /note="Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]; Region: AcoR; COG3284" /db_xref="CDD:33094" misc_feature 1060054..1060455 /locus_tag="Acear_0979" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" misc_feature 1060516..>1060638 /locus_tag="Acear_0979" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature 1060882..1061376 /locus_tag="Acear_0979" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 1060963..1060986 /locus_tag="Acear_0979" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(1060966..1060989,1061179..1061181,1061305..1061307) /locus_tag="Acear_0979" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 1061167..1061184 /locus_tag="Acear_0979" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 1061362..1061364 /locus_tag="Acear_0979" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature 1061674..1061799 /locus_tag="Acear_0979" /note="Bacterial regulatory protein, Fis family; Region: HTH_8; cl01091" /db_xref="CDD:186327" gene 1062115..1063272 /locus_tag="Acear_0980" /db_xref="GeneID:9513022" CDS 1062115..1063272 /locus_tag="Acear_0980" /EC_number="1.1.1.1" /note="COGs: COG1454 alcohol dehydrogenase class IV; InterPro IPR018211:IPR001670; KEGG: dae:Dtox_2962 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: C1TB62 alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase" /codon_start=1 /transl_table=11 /product="iron-containing alcohol dehydrogenase" /protein_id="YP_003827574.1" /db_xref="GI:302391754" /db_xref="GeneID:9513022" /translation="MKQVYGYFMSPVNLMGAGAVEEIGDQLKKLKGTKALIVTDEDLV ELGIVEEVTEHIKKVGIDFVVFDGVQPNPTVSNVEAGLELLEEENCDIVVSVGGGSPH DCAKGIAIVATNGGEITDYEGLDQSTEPMMPLISVNTTAGTASEMTRFAVITDEERQV KMAIADWRVTPNVAINDPLLMMKKPPALTAATGMDALTHAVEAYVSTDATPVTDSAAI KAIELVAENLREAVANGDNFEARDNMAYAEFLAGMAFNNASLGFVHAMAHQLGGFYDL PHGVCNAILLPHVEGFNLIANPGRLADIAETMGENIEELSTRAAADKALEAITTLSKD IGIPQRLSDLEGVKKEDFDTLAENALKDVCSSTNPRKATKEEIIGIFESAY" misc_feature 1062127..1063260 /locus_tag="Acear_0980" /note="Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria; Region: LPO; cd08176" /db_xref="CDD:173935" misc_feature 1062133..1063269 /locus_tag="Acear_0980" /note="Alcohol dehydrogenase, class IV [Energy production and conversion]; Region: EutG; COG1454" /db_xref="CDD:31643" misc_feature order(1062145..1062159,1062628..1062630,1062757..1062759, 1062850..1062852) /locus_tag="Acear_0980" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173935" misc_feature order(1062232..1062234,1062406..1062414,1062529..1062534, 1062541..1062543,1062568..1062570,1062595..1062597, 1062652..1062654,1062676..1062678,1062697..1062699, 1062709..1062711,1062904..1062906,1062946..1062948) /locus_tag="Acear_0980" /note="active site" /db_xref="CDD:173935" misc_feature order(1062697..1062699,1062709..1062711,1062904..1062906, 1062946..1062948) /locus_tag="Acear_0980" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173935" gene 1063560..1064051 /locus_tag="Acear_0981" /db_xref="GeneID:9513023" CDS 1063560..1064051 /locus_tag="Acear_0981" /EC_number="1.6.5.3" /note="COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012336:IPR012335; KEGG: chy:CHY_0731 Fe-hydrogenase, gamma subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: Q3AE49 Fe-hydrogenase, gamma subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit E ;anaerobic carbon-monoxide dehydrogenase diaphorase component iron-sulfur protein" /protein_id="YP_003827575.1" /db_xref="GI:302391755" /db_xref="GeneID:9513023" /translation="MACQCGEVEENKEEYLQPLKGILKAYAGKKEDLIPVLQAAQQEY GYLPQPVLREISKELDIFFSEVYGVATFYSQFHLEPRGENIIRVCMGTACHVRGGDEI LDKVKAELGIDAGETTDDQKFTLESVACIGACGLAPVMTVNDDTHGLLVPDKIPDILD QYR" misc_feature 1063641..1064048 /locus_tag="Acear_0981" /note="NADH-quinone oxidoreductase, E subunit; Region: nuoE_fam; TIGR01958" /db_xref="CDD:131013" misc_feature 1063812..1064045 /locus_tag="Acear_0981" /note="TRX-like [2Fe-2S] Ferredoxin (Fd) family, NADH:ubiquinone oxidoreductase (Nuo) subunit E subfamily; Nuo, also called respiratory chain Complex 1, is the entry point for electrons into the respiratory chains of bacteria and the mitochondria of...; Region: TRX_Fd_NuoE; cd03064" /db_xref="CDD:48613" misc_feature order(1063812..1063814,1063818..1063820,1063938..1063946) /locus_tag="Acear_0981" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:48613" misc_feature order(1063824..1063826,1063839..1063841,1063947..1063949, 1063959..1063961) /locus_tag="Acear_0981" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:48613" gene 1064079..1065920 /locus_tag="Acear_0982" /db_xref="GeneID:9513024" CDS 1064079..1065920 /locus_tag="Acear_0982" /EC_number="1.6.99.5" /note="COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR017896:IPR017900:IPR012336:IPR011538:IPR 019554:IPR019575:IPR001450:IPR012335; KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: C5RL36 NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain" /codon_start=1 /transl_table=11 /product="anaerobic carbon-monoxide dehydrogenase diaphorase component flavoprotein" /protein_id="YP_003827576.1" /db_xref="GI:302391756" /db_xref="GeneID:9513024" /translation="MKSLEQLNRLQQKAQQDLERVEKRILICGGTGCVSSGSKEIQDE LRKELEVNNLKSEVKIVETGCHGFCEKGPIIIIYPEEVFYCEVDPEDIKELVEKQLLE GEVVDRLLYEDPVSKESIPSYREIDFYNEQQQIALTNCGQINPEDIEEYLAVGGYQAL GEALTGMKPEEVIDEVKESGLRGRGGGGFPTGLKWQFAQESEGDKKYIICNADEGDPG AFMDRSILEGDPHKVLEGMIIAGYAVGSDEGYIYVRAEYPLAVKRLREAISQAREYGL LGENLFGTEFSFDINIKEGAGAFVCGEETALIASIEGRRGMPQSRPPYPAQEGLWGKP TNINNVETYANISTIITEGAESFSSVGTEESKGTKVFALAGKINNTGLVEVPMGITVE EIIYDIGGGIPGDKDFKAVQIGGPSGGCLPEEKLHLPIDYDSLLEAGAMMGSGGLVVM DEDTCMVDVARYFLDFTVSESCGKCAPCSEGTKRMLDILERITDGNGKQEDLEQLEKL AEVIKDTSLCGLGQTAPNPVLSTLKYFRDEYKAHVKDNKCPAGVCKSLVEYQITDDCQ GCTKCVDECPGDAISGEAKEQHTIDEDDCIKCGSCINVCPFDAIVTK" misc_feature 1064145..1064372 /locus_tag="Acear_0982" /note="Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:; Region: TRX_Fd_family; cd02980" /db_xref="CDD:48529" misc_feature order(1064148..1064150,1064154..1064156,1064262..1064270) /locus_tag="Acear_0982" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48529" misc_feature order(1064160..1064162,1064175..1064177,1064271..1064273, 1064283..1064285) /locus_tag="Acear_0982" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:48529" misc_feature 1064451..1065710 /locus_tag="Acear_0982" /note="NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion]; Region: NuoF; COG1894" /db_xref="CDD:32078" misc_feature 1064604..1065116 /locus_tag="Acear_0982" /note="Respiratory-chain NADH dehydrogenase 51 Kd subunit; Region: Complex1_51K; pfam01512" /db_xref="CDD:144926" misc_feature 1065447..1065584 /locus_tag="Acear_0982" /note="NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Region: NADH_4Fe-4S; pfam10589" /db_xref="CDD:192637" misc_feature <1065765..1065911 /locus_tag="Acear_0982" /note="B subunit; Region: rnfB; TIGR01944" /db_xref="CDD:162616" misc_feature 1065843..1065908 /locus_tag="Acear_0982" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" gene 1065940..1067775 /locus_tag="Acear_0983" /db_xref="GeneID:9513025" CDS 1065940..1067775 /locus_tag="Acear_0983" /EC_number="1.2.99.2" /note="COGs: COG1151 6Fe-6S prismane cluster-containing protein; InterProIPR010047:IPR011254:IPR004137:IPR016101:IPR 016099; KEGG: kcr:Kcr_0762 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; PRIAM: carbon-monoxide dehydrogenase (acceptor); SPTR: C5RL35 carbon-monoxide dehydrogenase, catalytic subunit; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit" /codon_start=1 /transl_table=11 /product="carbon-monoxide dehydrogenase, catalytic subunit" /protein_id="YP_003827577.1" /db_xref="GI:302391757" /db_xref="GeneID:9513025" /translation="MKEKAKSDGVETVWDRFEEQQPQCGFGQLGLCCRNCNMGPCRID PFGEGPSKGVCGATAGTIVSRNLIRMTAAGAAAHSDHGRETALVFKEIVEGEVPGYEI KDEAKLNSIASRLGVNTDREIEEVAKDVAEIALEDFGKQDDEVISFANAYAPESLQQV WQELDVAPRNIDREVVEIMHRTHMGVDADPLNLNLQGIRAALGDGWGGSLIGTEFSDV MFGTPEPVESSANLGVLEENKVNVITHGHVPILSEKIVEAAEDEEMIELAKSKGADGI VVAGMCCTGNEIIMRHGIPTAGNFLQQELAITTGAVDAMVVDYQCIMPSLTDVADCYH TKVITTSEKAKLPGAEHIEFDPAKADKIAKQIIKTAIENYPARKEEKIGIPEEKMDGV VGFSVESIVDALGGSLDPLLEAIKEGQIKGIAGIVGCNNPKVEHDEGHVEVAKKLIAN DILVVGTGCWSIAAMKDGLFKPEAAELAGDGLQAVCEQLEIPPCLHMGSCVDNTRILV AVSAIAEALGVEPSQLPVAGAAPEWMSEKAVSIGTYFVASGIFTVLGTTPPVLGSNEV VKLLTEDIEEVTGGKFAVESTPNEIADLMLDHIASKRKELLGERG" misc_feature 1065940..1067757 /locus_tag="Acear_0983" /note="Carbon monoxide dehydrogenase (CODH) is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA, respectively. CODH has two types of metal clusters, a cubane [Fe4-S4] center (B-cluster) similar to...; Region: CODH; cd01915" /db_xref="CDD:29677" misc_feature 1065940..1067757 /locus_tag="Acear_0983" /note="carbon-monoxide dehydrogenase, catalytic subunit; Region: CO_DH_cata; TIGR01702" /db_xref="CDD:130763" misc_feature order(1065970..1065972,1065985..1065987,1065994..1065999, 1066006..1066008,1066033..1066035,1066045..1066065, 1066069..1066071,1066096..1066107,1066135..1066137, 1066147..1066149,1066153..1066158,1066165..1066170, 1066414..1066416,1066423..1066434,1066453..1066455, 1066465..1066470,1066477..1066482,1066486..1066506, 1066516..1066518,1066897..1066914,1066930..1066932, 1066963..1066968,1066972..1066974,1066978..1066980, 1066984..1066992,1067539..1067541,1067545..1067550, 1067632..1067634,1067641..1067643,1067653..1067655, 1067665..1067670,1067740..1067742,1067749..1067751) /locus_tag="Acear_0983" /note="ACS interaction site; other site" /db_xref="CDD:29677" misc_feature order(1065970..1065972,1065985..1065990,1065994..1065999, 1066003..1066008,1066018..1066020,1066027..1066029, 1066033..1066035,1066042..1066065,1066096..1066107, 1066135..1066137,1066144..1066146,1066156..1066158, 1066165..1066167,1066177..1066179,1066186..1066188, 1066465..1066470,1066477..1066482,1066486..1066512, 1066516..1066518,1066897..1066911,1066921..1066923, 1066963..1066974,1066978..1066980,1067539..1067550) /locus_tag="Acear_0983" /note="CODH interaction site; other site" /db_xref="CDD:29677" misc_feature order(1066036..1066038,1066045..1066047,1066060..1066062, 1066102..1066104) /locus_tag="Acear_0983" /note="cubane metal cluster (B-cluster) [ion binding]; other site" /db_xref="CDD:29677" misc_feature order(1066678..1066680,1066786..1066788,1066900..1066902, 1067221..1067226,1067314..1067316,1067437..1067439, 1067542..1067544,1067548..1067550) /locus_tag="Acear_0983" /note="Ni-Fe-S cluster (C-cluster) [ion binding]; other site" /db_xref="CDD:29677" gene 1067778..1068314 /locus_tag="Acear_0984" /db_xref="GeneID:9513026" CDS 1067778..1068314 /locus_tag="Acear_0984" /note="COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896:IPR017900:IPR001450; KEGG: tga:TGAM_0823 7Fe ferredoxin; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C5RL34 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003827578.1" /db_xref="GI:302391758" /db_xref="GeneID:9513026" /translation="MEKIIYVNLDKCLGCHTCEIECAVEDSDSKSLFGAILEDPLPQA RVSVEFMEGNNIPWQCRHCDDAPCETVCPTGAIGRENSESPVVIEKDKCIGCKMCLQV CPFGVIERSKAGGVVTKCDLCTDRLEEGAEPACVEGCPTNALEFITTKELAKKRREAA AEGLVAAFQKSESDVKMG" misc_feature 1067778..>1068233 /locus_tag="Acear_0984" /note="Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion]; Region: HybA; COG0437" /db_xref="CDD:30786" misc_feature <1068030..1068212 /locus_tag="Acear_0984" /note="RPB11 and RPB3 subunits of RNA polymerase; Region: RNAP_RPB11_RPB3; cl11409" /db_xref="CDD:196219" gene 1068326..1069084 /locus_tag="Acear_0985" /db_xref="GeneID:9513027" CDS 1068326..1069084 /locus_tag="Acear_0985" /note="COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041:IPR017896:IPR017900:IPR001450; KEGG: mpl:Mpal_0845 ferredoxin; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; ferredoxin; SPTR: B8GGF2 ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain; 4Fe-4S binding domain" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003827579.1" /db_xref="GI:302391759" /db_xref="GeneID:9513027" /translation="MKAIINGRDVELKTEKTILELAEEMDIEIPTLCHHGGLEPYGAC RLCIVEIEKNGRRELDTSCTRYVEDGMKIRTETEEIIEKRKVIAELLLARAPESKKLQ KKLEDLGVTETEFTARDYDCVLYCGKCVRACKEEVGIGAINFVGRGYETEVDTPFSID SDVCIGCGACAEVCPTGAIEVDDEGSTRYIRYFNTTLELKECRECGDFFSTERMIERL KAEEEFSSFAEEYFDLCEKCRRNKEMSKFLEVKQ" misc_feature 1068326..>1068862 /locus_tag="Acear_0985" /note="NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) [Energy production and conversion]; Region: NuoG; COG1034" /db_xref="CDD:31237" misc_feature 1068341..>1068484 /locus_tag="Acear_0985" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature order(1068410..1068415,1068422..1068424,1068449..1068451, 1068455..1068466) /locus_tag="Acear_0985" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature order(1068422..1068424,1068455..1068457,1068464..1068466) /locus_tag="Acear_0985" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" misc_feature 1068680..1069057 /locus_tag="Acear_0985" /note="formate hydrogenlyase complex iron-sulfur subunit; Provisional; Region: PRK12387" /db_xref="CDD:183492" misc_feature 1068800..1068865 /locus_tag="Acear_0985" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" gene 1069081..1069836 /locus_tag="Acear_0986" /db_xref="GeneID:9513028" CDS 1069081..1069836 /locus_tag="Acear_0986" /note="COGs: COG3640 CO dehydrogenase maturation factor; InterPro IPR014433:IPR002586; KEGG: mae:Maeo_0554 cobyrinic acid ac-diamide synthase; PFAM: cobyrinic acid ac-diamide synthase; SPTR: C5RL31 cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain" /codon_start=1 /transl_table=11 /product="cobyrinic acid ac-diamide synthase" /protein_id="YP_003827580.1" /db_xref="GI:302391760" /db_xref="GeneID:9513028" /translation="MKIAVSGKGGVGKTTISAGLARIFSREGEEVIALDTDSSPNLMT ALGAKDTSVTPLSEMDELIEEKTGVEPGSGYGQMFRLNFTVDDILDRFGVECDDGVQL LVAGSIRQGGSGCFCPENALIKKLMEHYLKEWDQTLIMDMEAGIEHLGRGTTENVDVL LTVVEPSLRSVKTAARINRLAEDIGIENNVAILNKMKEEREKEIIEDKLDIPLIYTIP YNDSVNKADLKGNSVFNEDEELMNMMAELKQKL" misc_feature 1069081..1069833 /locus_tag="Acear_0986" /note="CO dehydrogenase maturation factor [Cell division and chromosome partitioning]; Region: CooC; COG3640" /db_xref="CDD:33438" misc_feature 1069084..1069572 /locus_tag="Acear_0986" /note="The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible...; Region: CooC; cd02034" /db_xref="CDD:73297" misc_feature 1069099..1069122 /locus_tag="Acear_0986" /note="P-loop; other site" /db_xref="CDD:73297" misc_feature <1069492..1069779 /locus_tag="Acear_0986" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" gene 1070097..1070468 /locus_tag="Acear_0987" /db_xref="GeneID:9513029" CDS 1070097..1070468 /locus_tag="Acear_0987" /note="KEGG: aoe:Clos_0953 component of glycine reductase complex; SPTR: C2L1B7 GrdX protein" /codon_start=1 /transl_table=11 /product="component of glycine reductase complex" /protein_id="YP_003827581.1" /db_xref="GI:302391761" /db_xref="GeneID:9513029" /translation="MAQYLIVTDNPLVKENVELDINYCESLDEVMITTRDLVHSRYKL ITHPLSGSVKPVQSPYKSIILQKIKNNKLNYKSLRIIESAITKVEQFKKNYTDRDYPK EVLKDYQTIDFSLLQSGLEKI" gene 1070573..1071859 /locus_tag="Acear_0988" /db_xref="GeneID:9513030" CDS 1070573..1071859 /locus_tag="Acear_0988" /note="InterPro IPR016585:IPR015417; KEGG: tte:TTE1879 GrdE proprotein; PFAM: glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; SPTR: Q8R8W0 GrdE proprotein; PFAM: glycine/sarcosine/betaine reductase component B subunits" /codon_start=1 /transl_table=11 /product="glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits" /protein_id="YP_003827582.1" /db_xref="GI:302391762" /db_xref="GeneID:9513030" /translation="MKLELGKIQINDVKFGSTTEVNSGLLTVNKDKLVEEIIDDNQIK SLDVELAKPGDSIRIIPVKDVVEPRVKVEGAGGIFPGIIAEEDMVGSGRTHALKGVGV VTTGKIVGFQEGIIDMSGPGAEYTPFSKLNNIVITCEVASDIEQHEHEEIVRMTGLKA ANYIGKVAQDLEPDEIEEFESKPIPEAVAEYPDLPKVGYIYMLQTQGLLHDTYVYGVD AKEILPTLVSPTEVMDGAIISGNCVSACDKNVTYVHQNNPIIEDLYKHHGTEYNFLGA IITNENVTLSDKKRSSNYTAKLAEQLGLDAAIISQEGFGNPDADLIMNCVKLEEKGIK TVLTTDEYAGRDGASQSLADADPKADAVVTAGNANETVTLPAMERIIGHQKVADVIAG GFDGSLHQDGSITVELQAITGATNELGFGNLTAREY" misc_feature 1070573..1071856 /locus_tag="Acear_0988" /note="Glycine/sarcosine/betaine reductase component B subunits; Region: Gly_reductase; pfam09338" /db_xref="CDD:150114" gene 1071900..1073201 /locus_tag="Acear_0989" /db_xref="GeneID:9513031" CDS 1071900..1073201 /locus_tag="Acear_0989" /note="Contains selenocysteine; InterPro IPR010187:IPR010186; KEGG: nth:Nther_0474 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; PFAM: Selenoprotein B glycine/betaine/sarcosine/D-proline reductase; SPTR: B2A5X7 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; glycine reductase, selenoprotein B; PFAM: glycine/sarcosine/betaine reductase selenoprotein B (GRDB); TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; glycine reductase, selenoprotein B" /codon_start=1 /transl_except=(pos:1072926..1072928,aa:Sec) /transl_table=11 /product="selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family" /protein_id="YP_003827583.1" /db_xref="GI:302391763" /db_xref="GeneID:9513031" /translation="MSLRIVHYINQFFGQIGGEEKADIPPKTEEGPVGPGNGINAGLK EIGEIVKTIICGDDYFNEHTEDAKVEIKKVLEDVEPDLVLAGPAFNAGRYGMACGGVA ELACDELDIPVISAMYPENPGYEMYKNYAYVIKTSDSAAGMREAIPNLIKLIKSYNKK DGKLGRPEEEGYMTRNLRKNIFAEKRGSTRAVEMLVKKINGEEFETEYPMPDFDRVDP VDPIEDLANTKVALVTSGGIVPEGNPDRIESSSASKYGEYKITETGETAHGGYDPVYA NEDPNRVLPVDVMRDLENEGAIGELHEFYYSTVGNGTAVANAKAYAEEIAEKLINDGV QAVILTSTUGTCTRCGATMVKEIEKAGLPVIHVATVVPISKTVGANRIVPAAAIPHPL GDPEKSLEEEKQIRREIVDKCLQALQTEIDDQTVFSYVKGC" misc_feature 1071909..1073180 /locus_tag="Acear_0989" /note="Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); Region: GRDB; cl06409" /db_xref="CDD:157190" misc_feature 1071909..1073180 /locus_tag="Acear_0989" /note="selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; Region: various_sel_PB; TIGR01918" /db_xref="CDD:130973" gene 1073292..1073615 /locus_tag="Acear_0990" /db_xref="GeneID:9513032" CDS 1073292..1073615 /locus_tag="Acear_0990" /note="KEGG: mta:Moth_1274 hypothetical protein; SPTR: Q2RJ01 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827584.1" /db_xref="GI:302391764" /db_xref="GeneID:9513032" /translation="MAKVKVSVEAGICGFTTFITADADGMEEVELNIESDCEQVQQVQ EEINSVNAMSMLSNKKPHETEVYQVLAAHLKHVSCPVYSGCFKAVEVAAGMALPEDVK IEIEK" gene 1073732..1074484 /locus_tag="Acear_0991" /db_xref="GeneID:9513033" CDS 1073732..1074484 /locus_tag="Acear_0991" /EC_number="5.1.1.3" /note="COGs: COG0796 glutamate racemase; InterPro IPR004391:IPR018187:IPR001920:IPR015942; KEGG: hor:Hore_02590 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: glutamate racemase; SPTR: B8D151 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase" /codon_start=1 /transl_table=11 /product="glutamate racemase" /protein_id="YP_003827585.1" /db_xref="GI:302391765" /db_xref="GeneID:9513033" /translation="MKIGFFDSGVGGITVLKEALKVLPNKDYIYYADTANVPYGTKPK EEVKHYVFDAVDFITDQGINALVIACNTATSVAVNDLRDEFQFPIIGMEPAVKPAVEK NKTKKVLVTATPLTLQEEKLWELVAKIGSKDIIDSLPLPKLVEFAENFIFDEETILSY LEERFSSYDLNRYSSIVLGCTHFIFYRRLFRKIIPDDVEIIDGNRGAVKQLKRQLKAP EHKSGTGEIIFYSSKKGNEDNIALREYIRLLD" misc_feature 1073732..1074427 /locus_tag="Acear_0991" /note="Asp/Glu/Hydantoin racemase; Region: Asp_Glu_race; cl00518" /db_xref="CDD:193849" gene 1074770..1076072 /locus_tag="Acear_0992" /pseudo /db_xref="GeneID:9513034" gene complement(1076295..1076813) /locus_tag="Acear_0993" /db_xref="GeneID:9513035" CDS complement(1076295..1076813) /locus_tag="Acear_0993" /EC_number="1.16.3.1" /note="COGs: COG1528 ferritin-like protein; InterPro IPR009040:IPR009078:IPR008331:IPR012347; KEGG: bcz:BCZK4783 ferritin; PFAM: ferritin Dps family protein; PRIAM: ferroxidase; SPTR: Q631R3 ferritin; PFAM: ferritin-like domain" /codon_start=1 /transl_table=11 /product="ferroxidase" /protein_id="YP_003827586.1" /db_xref="GI:302391766" /db_xref="GeneID:9513035" /translation="MLSDRLLEALNDQMNFEFLSAHYYLAMGAYCAEQDFDGFAHFFW VQAEEERFHAEKFYNFINEKGERAVIDAISKPQNDFDSLKDVFTTALEHEQEVTKRIY DLMDIATEESEYSTVNFLDWFVEEQVEEEDTMEGIIKKIDRLGEKGQGIFMLDQELAQ RTFDPANADQEE" misc_feature complement(1076340..1076807) /locus_tag="Acear_0993" /note="nonheme-containing ferritins; Region: Nonheme_Ferritin; cd01055" /db_xref="CDD:153113" misc_feature complement(1076382..1076795) /locus_tag="Acear_0993" /note="Ferritin-like domain; Region: Ferritin; pfam00210" /db_xref="CDD:189451" misc_feature complement(order(1076424..1076429,1076436..1076438, 1076532..1076534,1076655..1076657,1076664..1076669, 1076763..1076765)) /locus_tag="Acear_0993" /note="ferroxidase diiron center [ion binding]; other site" /db_xref="CDD:153113" gene 1077057..1077431 /locus_tag="Acear_0994" /db_xref="GeneID:9513036" CDS 1077057..1077431 /locus_tag="Acear_0994" /EC_number="1.15.1.1" /note="COGs: COG2033 Desulfoferrodoxin; InterPro IPR004462:IPR004793:IPR002742; KEGG: hor:Hore_05310 desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; SPTR: B8D261 Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain" /codon_start=1 /transl_table=11 /product="desulfoferrodoxin" /protein_id="YP_003827587.1" /db_xref="GI:302391767" /db_xref="GeneID:9513036" /translation="MEVREVFKCDICGNVVELLQAGAPALVCCGEDMKKLEAQTEDSS VEKHVPVVEETDDGIKILIGSTLHPMEDDHLIRFIEVLTEDKVLRAEFKAGDEPKAVF NVDQDEVIEVREFCNLHGLWKA" misc_feature 1077060..1077428 /locus_tag="Acear_0994" /note="desulfoferrodoxin; Region: dfx_rbo; TIGR00320" /db_xref="CDD:161816" misc_feature 1077069..1077164 /locus_tag="Acear_0994" /note="Desulforedoxin (DSRD) domain; a small non-heme iron domain present in the desulforedoxin (rubredoxin oxidoreductase) and desulfoferrodoxin proteins of some archeael and bacterial methanogens and sulfate/sulfur reducers. Desulforedoxin is a small...; Region: DSRD; cd00974" /db_xref="CDD:28839" misc_feature order(1077081..1077083,1077090..1077092,1077138..1077143) /locus_tag="Acear_0994" /note="non-heme iron binding site [ion binding]; other site" /db_xref="CDD:28839" misc_feature order(1077096..1077107,1077111..1077116,1077120..1077122, 1077126..1077137) /locus_tag="Acear_0994" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:28839" misc_feature 1077189..1077425 /locus_tag="Acear_0994" /note="Superoxide reductase-like (SORL) domain; present in a family of mononuclear non-heme iron proteins that includes superoxide reductase and desulfoferrodoxin. Superoxide reductase-like proteins scavenge superoxide anion radicals as a defense mechanism...; Region: SORL; cl00014" /db_xref="CDD:163715" misc_feature order(1077192..1077194,1077198..1077200,1077258..1077260, 1077276..1077278,1077402..1077404,1077411..1077413) /locus_tag="Acear_0994" /note="non-heme iron binding site [ion binding]; other site" /db_xref="CDD:28801" gene 1077459..1078034 /locus_tag="Acear_0995" /db_xref="GeneID:9513037" CDS 1077459..1078034 /locus_tag="Acear_0995" /note="COGs: COG1592 Rubrerythrin; InterProIPR004039:IPR009040:IPR009078:IPR003251:IPR 012347; KEGG: mta:Moth_1286 rubrerythrin; PFAM: Rubrerythrin; rubredoxin-type Fe(Cys)4 protein; SPTR: Q2RIY9 Rubrerythrin; PFAM: Rubrerythrin" /codon_start=1 /transl_table=11 /product="Rubrerythrin" /protein_id="YP_003827588.1" /db_xref="GI:302391768" /db_xref="GeneID:9513037" /translation="MSELKGTETEKNLLKSFAGESQARNRYDYFASQAKKEGYNQISN IFKETARNEKEHAKRVFKFLKGGEVEVTAAFPAGVIGTTVENLEAAAAGENHEHTSMY PEFAEVAEEEGFTEIAKVFREIAEAEEAHEERFLALLNNIKNDRVFKREEEVRWKCGN CGYVHDGKEAPEVCPACAHPQSYFELKEENY" misc_feature 1077471..1078022 /locus_tag="Acear_0995" /note="Rubrerythrin [Energy production and conversion]; Region: COG1592" /db_xref="CDD:31780" misc_feature 1077480..1077887 /locus_tag="Acear_0995" /note="Rubrerythrin, ferritin-like diiron-binding domain; Region: Rubrerythrin; cd01041" /db_xref="CDD:153100" misc_feature order(1077516..1077518,1077525..1077527,1077537..1077539, 1077615..1077617,1077624..1077626,1077735..1077740, 1077747..1077749,1077840..1077842,1077849..1077851) /locus_tag="Acear_0995" /note="binuclear metal center [ion binding]; other site" /db_xref="CDD:153100" misc_feature 1077918..1078019 /locus_tag="Acear_0995" /note="Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-...; Region: rubredoxin_SM; cd00729" /db_xref="CDD:29432" misc_feature order(1077930..1077932,1077939..1077941,1077978..1077980, 1077987..1077989) /locus_tag="Acear_0995" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29432" gene 1077977..1080757 /locus_tag="Acear_0996" /db_xref="GeneID:9513038" CDS 1077977..1080757 /locus_tag="Acear_0996" /note="COGs: COG0666 FOG: ankyrin repeat; InterPro IPR002110:IPR020683; KEGG: ankyrin repeat protein; PFAM: ankyrin; SPTR: A2DU09 ankyrin repeat protein, PFAM: ankyrin repeat" /codon_start=1 /transl_table=11 /product="ankyrin" /protein_id="YP_003827589.1" /db_xref="GI:302391769" /db_xref="GeneID:9513038" /translation="MSRLCSSTVLFRIKGRKLLISLLKPIRIVTRIGFFKFLKSFSDL KQVINYSMFNYYSVASIVKGAIMLKKKLQLIILLSVITTLALNFTVYADNDYNSLLFE GVKTNKLSKVKEALENGANISARNDKGETPLKLAVAQGYFGLVEFLHKEKKAKVNTKD NNDITPLMEAAFDGNLKLMKYLVAEGAELEAKDKDGWTALKYGINQGHIETIDYLLNA GAEINTKDKRGRTALMTAVDYGKLEVVRYLTREYLVRLSAINVQDERGWTPLMIAAYR GDLEAARYLVEAGAYLNTQNKNGWTPLMKAAYEGHTQVANYLIKAGADIDAQNQEGWT PLMEAAYKGHIQIVKKLVQSGSYIDAKNSNGWTSLMVAANEGYLEVVDYLVSQEADIE AENKNGWTPLMKAAYEGHIQVVDYLIEAGADIDAQNKNGWTSLMSAIYNGEVEPVKLL IQQEADLGGRDKRGYTALRMAVLNGRLQMVKILVEAGIDIGIRDYSGWPLLKSAVMKE NYEVADYLLVSGADIDAENKEGWTTLHLAVAKGRLEPVKYLVKNGANIKAQNKAGQTP LHLAAEEGKIDVLDYLLTKDVSIDLRNNRGRTALFTAVDENNQKIVKFLLGQGADIEA RTDQGRTPLIFAASSGRLEIVKYLVDQGADLNAADNRNWTPLMAAAAEERLRIVEYLI SEQNIKLQGPKGEELLRLAARRGELSVIKYLVNREVEITRQDQKGRSPLMLAAQKGYL SVVDYLLERGADLEVRSKNGYTPLMLAASGGNLKVVKYLLDQGAEITVRGKGNETPLM LASYGGSMEIVEFLIDQGAEIKARDESGWSALMFAAYNGKTEIIEYLVDKGARIGIKD DNGWTPLIAAAYNGYLKTVKYLIEAGADIKAKTDNSLTVYEMAVAQEHFEILGFLKEV IEDRNQKNYFNL" misc_feature 1078253..1078624 /locus_tag="Acear_0996" /note="ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other...; Region: ANK; cd00204" /db_xref="CDD:29261" misc_feature 1078373..1078654 /locus_tag="Acear_0996" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" misc_feature 1078445..1078834 /locus_tag="Acear_0996" /note="ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other...; Region: ANK; cd00204" /db_xref="CDD:29261" misc_feature 1078643..1079032 /locus_tag="Acear_0996" /note="ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other...; Region: ANK; cd00204" /db_xref="CDD:29261" misc_feature 1078784..1079062 /locus_tag="Acear_0996" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" misc_feature 1078853..1079230 /locus_tag="Acear_0996" /note="ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other...; Region: ANK; cd00204" /db_xref="CDD:29261" misc_feature 1078982..1079260 /locus_tag="Acear_0996" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" misc_feature 1079051..1079428 /locus_tag="Acear_0996" /note="ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other...; Region: ANK; cd00204" /db_xref="CDD:29261" misc_feature 1079180..1079458 /locus_tag="Acear_0996" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" misc_feature 1079477..1079755 /locus_tag="Acear_0996" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" misc_feature 1079546..1079923 /locus_tag="Acear_0996" /note="ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other...; Region: ANK; cd00204" /db_xref="CDD:29261" misc_feature 1079675..1079953 /locus_tag="Acear_0996" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" misc_feature 1079942..1080415 /locus_tag="Acear_0996" /note="ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other...; Region: ANK; cd00204" /db_xref="CDD:29261" misc_feature 1080239..1080613 /locus_tag="Acear_0996" /note="ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other...; Region: ANK; cd00204" /db_xref="CDD:29261" misc_feature 1080266..1080544 /locus_tag="Acear_0996" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" misc_feature 1080464..1080742 /locus_tag="Acear_0996" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" gene complement(1080763..1081767) /locus_tag="Acear_0997" /db_xref="GeneID:9513039" CDS complement(1080763..1081767) /locus_tag="Acear_0997" /note="COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterProIPR000014:IPR006675:IPR003607:IPR013767:IPR 006674; KEGG: det:DET1049 HD domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold domain protein; SMART: metal-dependent phosphohydrolase HD region; PAS domain containing protein; SPTR: Q3Z7N5 HD domain protein; TIGRFAM: PAS sensor protein; metal dependent phophohydrolase; PFAM: HD domain; PAS fold; TIGRFAM: PAS domain S-box; uncharacterized domain HDIG" /codon_start=1 /transl_table=11 /product="PAS/PAC sensor protein" /protein_id="YP_003827590.1" /db_xref="GI:302391770" /db_xref="GeneID:9513039" /translation="MAEDNHKLFKTALKQISKGIIITNDNNKIIFANEEAKKIKNISQ TELIGKDITSVHPDDTQNKIKQIMNSLQQKNVNQFTTIIANQDNQEYLNTTYKLLENE NNDYIGTMQILSDKTSQIKFEEEKAKSLHKLEKQVDTLNEQLQDLFISSMTSLVKTLE AKDSYTKGHSLRVCEIATKLAEHKHDVSTEIDKIKLAGKLHDIGKVGTQETILNKSSS LSDSEFNHIKQHPIMSEEILSPIERFKPITKMVRHHHERYDGTGYPDGLKQKEIPLGS RIVSIADSYDAMTSNRPYRSPMNPKEAVREIKENLGTQFDPELGKIFLELFYEGKIEE " misc_feature complement(1081423..1081713) /locus_tag="Acear_0997" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(order(1081504..1081506,1081519..1081521, 1081597..1081605,1081642..1081644,1081660..1081662, 1081672..1081674)) /locus_tag="Acear_0997" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(1081480..1081482,1081486..1081488, 1081567..1081572,1081579..1081581,1081603..1081605, 1081612..1081614)) /locus_tag="Acear_0997" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(1080847..1081275) /locus_tag="Acear_0997" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature complement(order(1080919..1080921,1081162..1081167, 1081261..1081263)) /locus_tag="Acear_0997" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature complement(1081162..1081164) /locus_tag="Acear_0997" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene 1082028..1082816 /locus_tag="Acear_0998" /db_xref="GeneID:9513040" CDS 1082028..1082816 /locus_tag="Acear_0998" /EC_number="3.1.1.5" /note="COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR016035:IPR002641; KEGG: hor:Hore_10170 patatin; PFAM: patatin; PRIAM: lysophospholipase; SPTR: B8CWV4 patatin; PFAM: patatin-like phospholipase" /codon_start=1 /transl_table=11 /product="lysophospholipase" /protein_id="YP_003827591.1" /db_xref="GI:302391771" /db_xref="GeneID:9513040" /translation="MGEERPTVGLALGAGAAKGIAHIGVLQVLKEADINIDYLAGTSI GSMIGGFYAAGLDLKWIERIAYQINWDLLTDFTVPRQGLIAGKKVKAFVQLLTKSKRF SDLDIPFAAVATDIEKGEEVILQDGLVADAIRASTSIPGVYVPYRIDNRLLVDGAILN RIPVNVVQNLGADVIIGVDVGFDFQENKVNNIFDVILTSIRIMEQEVFDKRIIEADVL IRPEVGYIAPQDLDRAEEAVAAGIEAAQKALPQIKESIERWEEQ" misc_feature 1082100..1082567 /locus_tag="Acear_0998" /note="Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1; Region: Pat_PNPLA6_PNPLA7_NTE1_like; cd07205" /db_xref="CDD:132844" misc_feature 1082148..1082162 /locus_tag="Acear_0998" /note="nucleophile elbow; other site" /db_xref="CDD:132844" gene 1082813..1083829 /locus_tag="Acear_0999" /db_xref="GeneID:9513041" CDS 1082813..1083829 /locus_tag="Acear_0999" /note="COGs: COG3480 secreted protein containing a PDZ domain; InterPro IPR020568:IPR001478; KEGG: hor:Hore_10180 PDZ/DHR/GLGF domain protein; SPTR: B8CWV5 PDZ/DHR/GLGF domain protein; PFAM: Lon protease (S16) C-terminal proteolytic domain" /codon_start=1 /transl_table=11 /product="PDZ/DHR/GLGF domain protein" /protein_id="YP_003827592.1" /db_xref="GI:302391772" /db_xref="GeneID:9513041" /translation="MINFRSKRVKRVLTVSLIILVAVVLSAVWPTDYYLESPGVAKDL SPLIEVENGYAQNIEGQFRLTAVSLEPASLLEYYYISFFGADGVTLTPLKRQLPSGVD PEEYFEMMQEVMKESQLKAQAVALRQAGYEPTVTGKGAKIVEILEESNARGKLKQDDI IIKVDDKQVNLLTEVVDEIRAREIGEVVKVTVKRGEKEIDYKIKTKELEETPGQASLG VLISSYQRSYDFPVEIKVDAGEIGGPSAGMMFTLEILNQLTAADLTHGYDIAGTGTIT LDGKVGEISGIKQKILAAEKEGVDIFLAPDKNYEAAKETATEVKVVAIEDIQAAVQFL NSLE" misc_feature 1082900..1083826 /locus_tag="Acear_0999" /note="Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms]; Region: SdrC; COG3480" /db_xref="CDD:33283" misc_feature <1083506..1083736 /locus_tag="Acear_0999" /note="Lon protease (S16) C-terminal proteolytic domain; Region: Lon_C; pfam05362" /db_xref="CDD:191262" gene complement(1083813..1085081) /locus_tag="Acear_1000" /db_xref="GeneID:9513042" CDS complement(1083813..1085081) /locus_tag="Acear_1000" /note="COGs: COG1323 nucleotidyltransferase; InterPro IPR008513; KEGG: hor:Hore_10190 predicted nucleotidyltransferase; PFAM: protein of unknown function DUF795; SPTR: B8CWV6 UPF0348 protein Hore_10190; PFAM: protein of unknown function (DUF795)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827593.1" /db_xref="GI:302391773" /db_xref="GeneID:9513042" /translation="MKVAGVITEYNPFHYGHKYHLEKSLKLTEANYSICVMSGNFVQR GEPAITNKWSRTEMALNAGIDLILELPVTYALRSAEYFAYGAVQLLNKTGVVDQLVFG SEIGEINPLLTVGKILAEEPAELSNLIQTELKKGLSFPEARAKAVVNYITQTNINLTP TEIQEIIGNPNNILGLEYIKALSRSKSSIQPLTIQRRGADYYQQNIETEIVSATAIRN RILSEDMNYNLTTKIPTYTNRIIKEELNQGKAPISLQNFNLAVLSILRRTSKTELAEF EDVTAGLENRIKDAALKTGSLLELINLIKTKRFTQTRIQRILLQLLLNLKQKDLHKFD NAGGPQYLRVLGFNQQGRKLLSAISDKGSLPLINRIASHYQSSYPPQSLKEEMLAAEI RATDLYSLAYDNEEYRRGGQDYRKPIILEN" misc_feature complement(1083825..1085081) /locus_tag="Acear_1000" /note="hypothetical protein; Provisional; Region: PRK13670" /db_xref="CDD:184227" misc_feature complement(1084218..1085081) /locus_tag="Acear_1000" /note="hypothetical protein; Provisional; Region: PRK13671" /db_xref="CDD:184228" gene 1085224..1085421 /locus_tag="Acear_1001" /pseudo /db_xref="GeneID:9513043" gene 1085755..1086759 /locus_tag="Acear_1002" /db_xref="GeneID:9513044" CDS 1085755..1086759 /locus_tag="Acear_1002" /EC_number="2.3.1.8" /note="COGs: COG0280 phosphotransacetylase; InterPro IPR004614:IPR012147:IPR002505; KEGG: hor:Hore_10200 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; SPTR: B8CWV7 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase" /codon_start=1 /transl_table=11 /product="phosphotransacetylase" /protein_id="YP_003827594.1" /db_xref="GI:302391774" /db_xref="GeneID:9513044" /translation="MDFVTEIKEEAQAAGKTIVLPEGEEPRMIKAVPQILEEELADII LLGEESKLEEIADEESVDISGAEIIDPKEADRLDEFSSTYYELRKHKGISEEEALEQM EDSLYFGAMLVKEGIADGLVAGALNATANVLRPVIKIIGTEEEVSIVSGSFLMIVPDC EYGADGKMLFADSGVFPEGSPEELAEIAISSADTFEALTGEEPKVAMLSFSTKGSAEH PLVDKMREAAEICKEKAPDLEVDGEMQGDAALVPEIGAKKAPDSDVAGNANVLIFPDL NGGNIAYKLVQRLADADAFGPLIQGSALPVNDLSRGCSVSDIVTVTAITAVQAAFKDK " misc_feature 1085755..1086705 /locus_tag="Acear_1002" /note="Phosphate acetyl/butaryl transferase; Region: PTA_PTB; cl00390" /db_xref="CDD:193798" misc_feature 1085761..1086705 /locus_tag="Acear_1002" /note="Phosphotransacetylase [Energy production and conversion]; Region: Pta; COG0280" /db_xref="CDD:30628" gene 1086788..1088002 /locus_tag="Acear_1003" /db_xref="GeneID:9513045" CDS 1086788..1088002 /locus_tag="Acear_1003" /EC_number="2.7.2.1" /note="COGs: COG0282 Acetate kinase; InterPro IPR004372:IPR000890; KEGG: hor:Hore_10210 acetate kinase; PFAM: acetate and butyrate kinase; SPTR: B8CWV8 Acetate kinase; TIGRFAM: acetate kinase; PFAM: Acetokinase family; TIGRFAM: acetate kinase" /codon_start=1 /transl_table=11 /product="acetate kinase" /protein_id="YP_003827595.1" /db_xref="GI:302391775" /db_xref="GeneID:9513045" /translation="MKVLVLNCGSSSAKYQLINMEDESVLASGVIERIGIDGAFLEHE PAQGEEVKVENEIPDHSVAIKMVIDALLDDDYGVIDDMNEISAVGHRVVHGGEEFADS VLVDDEVYEGIDSVKDLAPLHNPPNLLGIEVSQELMPETPDVAVFDTAFHQTMPAKSY MYALPYEWYEEHDVRRYGFHGTSHKYVSKRAAKISDEPIEDLKIITCHLGNGASVAAI NGGEVIDTSMGLTPLEGLVMGTRCGDIDPAIIPFMMEKEDLDASEVDTILNKESGVAG VSGVSSDFRDLKESANDGNERAQLAIDLFCQRVKKYIGSYSAALGGVDVVVFTAGIGE NAIDIRAKILEDLDYLGLTLDEDKNDMRGKEEVITTDNSDNIAMVIPTNEELVIARDT KRLVIEAQENAS" misc_feature 1086788..1087975 /locus_tag="Acear_1003" /note="Acetokinase family; Region: Acetate_kinase; cl01029" /db_xref="CDD:194013" gene 1088150..1088899 /locus_tag="Acear_1004" /db_xref="GeneID:9513046" CDS 1088150..1088899 /locus_tag="Acear_1004" /note="COGs: COG2035 membrane protein; InterPro IPR007163; KEGG: mae:Maeo_0809 hypothetical protein; PFAM: protein of unknown function DUF368; SPTR: C5U7M6 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF368)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827596.1" /db_xref="GI:302391776" /db_xref="GeneID:9513046" /translation="MNKFLELFMKGIPIGISNTLPGVSGGTMALVLGIYDDLISGIKK IKLSVVGPIFLGAVVGVLGSSKIITFLLESYSSLVKAFLLGLIFASSKVTFKQVKEIN LKTIGLSLVGLLLALMYSVELGSVTTTSSLSYFKVFFGGAIGSVAMILPGVSGGTILI MLGLYEGVLEAITVLNLSVIIIFSLGVGSGLLAFSRILSFLLNNFRSLLMAFLTGLIL GSMRSVISFQLGIGVIISFILGVIVIQLLSE" misc_feature 1088189..1088887 /locus_tag="Acear_1004" /note="Domain of unknown function (DUF368); Region: DUF368; cl00893" /db_xref="CDD:193969" gene 1088926..1089210 /locus_tag="Acear_1005" /db_xref="GeneID:9513047" CDS 1088926..1089210 /locus_tag="Acear_1005" /note="KEGG: dhd:Dhaf_4209 hypothetical protein; SPTR: B8FTX4 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827597.1" /db_xref="GI:302391777" /db_xref="GeneID:9513047" /translation="MSIFEAIMLLCFGAAWPASIYRSYVSRDNSGKSLWFMVIVLIGY ISGVTHKLIYSYDLVIYLYILNGLMVSADILLYYRNSRLTEESDSEMKSN" gene 1089863..1091230 /locus_tag="Acear_1006" /db_xref="GeneID:9513048" CDS 1089863..1091230 /locus_tag="Acear_1006" /note="COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528:IPR005829; KEGG: nth:Nther_2612 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: B2A1X1 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: efflux protein, MATE family" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /protein_id="YP_003827598.1" /db_xref="GI:302391778" /db_xref="GeneID:9513048" /translation="MELTEDSDRLGNEPIIPLLFKLSVPSIIGMVIQALYNVIDSIYI GHLSKEALSALSLVFPLQMILIAVAVGTGVGTSSLISRLLGEEEDDEANSAAQHTVLL IIFYGMVAILIGIFFSRGLLRLFTSNNTLIDLGSSYIRIILIGSWAVFFPIVADNILR GEGNTYAPMWTMIIGALLNIALDPFLIFGIGIFPQLGIRGAAYATVISRFISGIFIGY ILFKSERQFNFNPKTFEFDFSIIHEIYQVGLPAMVMQLLTSFMIIGINKIVAGYSIAA VAVVGVYHRLQTFVFMPVFGLDQGYMPIVGYNYGHENPDRMKKTIRYGLIIGFLFTSL GGVIFQLFPRELISLFNNDPALLDIGETALKRISFAFPIMGLVIVASTTFQAIGEGIP SLVLSFLRQILLLLPIMYLLGRLYGLSALWYAFPISELITVILMAFWLASTLQEAYQE LATEN" misc_feature 1089905..1091191 /locus_tag="Acear_1006" /note="Na+-driven multidrug efflux pump [Defense mechanisms]; Region: NorM; COG0534" /db_xref="CDD:30880" misc_feature 1089935..1090414 /locus_tag="Acear_1006" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" misc_feature 1090610..1091041 /locus_tag="Acear_1006" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" gene 1091366..1092376 /locus_tag="Acear_1007" /db_xref="GeneID:9513049" CDS 1091366..1092376 /locus_tag="Acear_1007" /EC_number="2.3.1.8" /note="COGs: COG0280 phosphotransacetylase; InterPro IPR004614:IPR012147:IPR002505; KEGG: hor:Hore_10200 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; SPTR: B8CWV7 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase" /codon_start=1 /transl_table=11 /product="phosphotransacetylase" /protein_id="YP_003827599.1" /db_xref="GI:302391779" /db_xref="GeneID:9513049" /translation="MDFVTEIKEEAQAAGKTIVLPEGEEPRMIKAVPQILEEELADII LLGEESKLQEIADEESVDISGAEIIDPKEADRLDEFGSTYYELRKHKGISKEEALEQM EDPLYFGAMLVKEGIADGLVAGALNATANVLRPVIKIIGTEEEVSIVSGSFLMIVPDC EYGADGKMLFADSGVFPEGSPEELAEIAISSADTFEALTGEEPKVAMLSFSTKGSAEH PLVDKMREAAEICKEKAPDLEVDGEMQGDAALVPEIGAKKAPDSDVAGNANVLIFPDL NGGNIAYKLVQRLAGADAFGPLIQGSALPVNDLSRGCSVSDIVTVTAITAVQAAFKDK QK" misc_feature 1091366..1092316 /locus_tag="Acear_1007" /note="Phosphate acetyl/butaryl transferase; Region: PTA_PTB; cl00390" /db_xref="CDD:193798" misc_feature 1091372..1092316 /locus_tag="Acear_1007" /note="Phosphotransacetylase [Energy production and conversion]; Region: Pta; COG0280" /db_xref="CDD:30628" gene 1092403..1093599 /locus_tag="Acear_1008" /db_xref="GeneID:9513050" CDS 1092403..1093599 /locus_tag="Acear_1008" /EC_number="2.7.2.1" /note="COGs: COG0282 Acetate kinase; InterPro IPR004372:IPR000890; KEGG: hor:Hore_10210 acetate kinase; PFAM: acetate and butyrate kinase; SPTR: B8CWV8 Acetate kinase; TIGRFAM: acetate kinase; PFAM: Acetokinase family; TIGRFAM: acetate kinase" /codon_start=1 /transl_table=11 /product="acetate kinase" /protein_id="YP_003827600.1" /db_xref="GI:302391780" /db_xref="GeneID:9513050" /translation="MKVLVLNCGSSSLKYQLINMENESALAKGLVERIGIDGAFLEHE PAGGEEVTVENEIPDHSVAIKMVIDALLDDDYGVIDDMDEINAVGHRVVHGGEEFAES VLIDDEVYEGIDSVKDLAPLHNPPNLLGIEVSQELMPETPDVAVFDTAFHQTMPAKSY MYALPYEWYEKYGVRRYGFHGTSHKYVSQRAAEVVDESAEDLKVITCHLGNGASVAAV DGGKVIDTSMGLTPLEGLAMGTRCGDIDPAIIPFMMEKEDLDASEVDTILNKESGVAG VSGVSSDFRDLEQAANDGNEKAQLAIDLFCQRVKKYIGSYAAELGGVDVIVMTAGIGE NGIEIREDILEGLEFLGIEVDSEKNDMRGEEQVITTDSSETKAVVIPTNEELMIARDT ERLVTA" misc_feature 1092403..1093590 /locus_tag="Acear_1008" /note="Acetokinase family; Region: Acetate_kinase; cl01029" /db_xref="CDD:194013" gene 1093675..1094160 /locus_tag="Acear_1009" /db_xref="GeneID:9513051" CDS 1093675..1094160 /locus_tag="Acear_1009" /note="COGs: COG1399 metal-binding possibly nucleic acid-binding protein; InterPro IPR018245:IPR010916:IPR003772; KEGG: hor:Hore_10220 predicted metal-binding, possibly nucleic acid-binding protein; PFAM: protein of unknown function DUF177; SPTR: B8CWV9 Predicted metal-binding, possibly nucleic acid-binding protein; PFAM: Uncharacterized ACR, COG1399" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827601.1" /db_xref="GI:302391781" /db_xref="GeneID:9513051" /translation="MKINVEDIKENLGEFKELSFKEQIEDLKFQGRDIKVVKPAQMEF QVFNTDDSFLVTGSIELELNVACSRCLERFNLPVSIDLEEEVDKEEVELIDNQAMIDI TKEIDDSIMLAIPMQPVCDEDCAGLCPSCGQNLNEADCDCFMHTVDPRLAKLEKLLDK E" misc_feature 1093837..1094148 /locus_tag="Acear_1009" /note="Uncharacterized ACR, COG1399; Region: DUF177; cl00616" /db_xref="CDD:193886" gene 1094202..1094369 /locus_tag="Acear_1010" /db_xref="GeneID:9513052" CDS 1094202..1094369 /locus_tag="Acear_1010" /note="COGs: COG0333 Ribosomal protein L32; InterPro IPR002677; KEGG: hor:Hore_10230 ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: B8CWW0 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L32P" /protein_id="YP_003827602.1" /db_xref="GI:302391782" /db_xref="GeneID:9513052" /translation="MAVPKQRTSKSRKRKRRTHWKLNAPNLVECSQCGEFKLSHRVCN ECGYYKGRPVK" misc_feature 1094202..1094363 /locus_tag="Acear_1010" /note="Ribosomal L32p protein family; Region: Ribosomal_L32p; cl09115" /db_xref="CDD:195795" gene 1094517..1095113 /locus_tag="Acear_1011" /db_xref="GeneID:9513053" CDS 1094517..1095113 /locus_tag="Acear_1011" /note="InterPro IPR017275; KEGG: tte:TTE1477 fatty acid biosynthesis transcriptional regulator; SPTR: B7RAH2 Putative uncharacterized protein; PFAM: MaoC like domain" /codon_start=1 /transl_table=11 /product="fatty acid biosynthesis transcriptional regulator protein" /protein_id="YP_003827603.1" /db_xref="GI:302391783" /db_xref="GeneID:9513053" /translation="MGKKLSKAERQKALKEKIEENPFLIDQELAKIFGVSIQTIRLDR LELNIPEVRKRIRNLAKDSYSKVKSVSNSEIIGELIDIELNKSGTSILETNEDMGLTD SRIVRGHHIFAQANSLAVAIIDTDLALTGLTKTKFECPVHVGERLIAEAVVQSKKDEK FQIEVTTKVKQDRVFNGEFIIFSGGRLNGEVKKRADSR" misc_feature 1094523..1095065 /locus_tag="Acear_1011" /note="fatty acid biosynthesis transcriptional regulator; Provisional; Region: PRK04424" /db_xref="CDD:179847" misc_feature 1094730..1095053 /locus_tag="Acear_1011" /note="The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated...; Region: hot_dog; cl00509" /db_xref="CDD:193847" gene 1095097..1096104 /locus_tag="Acear_1012" /db_xref="GeneID:9513054" CDS 1095097..1096104 /locus_tag="Acear_1012" /note="COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; InterPro IPR012281:IPR003664; KEGG: dhd:Dhaf_3821 fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; SPTR: B8FRS7 Fatty acid/phospholipid synthesis protein plsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX" /codon_start=1 /transl_table=11 /product="phosphate:acyl-(acyl carrier protein) acyltransferase" /protein_id="YP_003827604.1" /db_xref="GI:302391784" /db_xref="GeneID:9513054" /translation="MQIAVDVMGGDYAPDEIIKGAVESISEIEGKILLVGPEDVIEEK LKDYNYNLNRLEIIDAPDVIEMDETPAKAVRQKTDSSIAVGVRLVRSGKADALVSAGS TGAVMAGSLLKLGRIKGVKRPAIATVMPALEGETLVLDVGANVDSTPENMVQYALMGN IYAEQILHKSKPKVGLLSIGEEAKKGNELTKETYQLLKELDINFIGNVEGRDIFTTDC DVVVCDGFVGNTILKTAEGLSKTVFEMMKEELEASLIAKLGSWFMKSSLKRLKKKMDY AEYGGAPLLGVNGVVIIGHGSSKNKAVKNAINVACESVERQVLDQIKENINERTGRAD E" misc_feature 1095097..1096080 /locus_tag="Acear_1012" /note="Phosphate acetyl/butaryl transferase; Region: PTA_PTB; cl00390" /db_xref="CDD:193798" gene 1096097..1097089 /locus_tag="Acear_1013" /db_xref="GeneID:9513055" CDS 1096097..1097089 /locus_tag="Acear_1013" /EC_number="2.3.1.41" /note="COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterProIPR004655:IPR016039:IPR013751:IPR013747:IPR 016038; KEGG: hor:Hore_10260 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: B8CWW3 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl-carrier-protein) synthase III" /protein_id="YP_003827605.1" /db_xref="GI:302391785" /db_xref="GeneID:9513055" /translation="MSKELRRAGITGVGSYAPDKVLTNRDLEEMVDTSDEWIKSRTGI QERRIAKEETTTSDLAYKAAEAALDDADLAPEELDLILVATVTPDMVFPATGCLLQDR LNATDAAAFDLEAGCSGFVYGISVATQFVRTGAYDNVLVIGAETLSKIINWEDRNTCV LFGDGAGAAVIQPVESRGILSTVLGSDGSGGDVLQIPAGGSKQPASLETVENNLHCIQ MEGNAVFKFAVRAMGKGAVEALNEAGLEKEDVDFLIPHQANIRIIDGAAKRLNLSDDE VFVNLDKYGNTSAASIPIALDEAVEAGKIHSGDRVVIVGFGAGLTWAASVIEWS" misc_feature 1096112..1097083 /locus_tag="Acear_1013" /note="3-oxoacyl-(acyl carrier protein) synthase III; Reviewed; Region: PRK09352" /db_xref="CDD:181792" misc_feature 1096115..1097077 /locus_tag="Acear_1013" /note="Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl...; Region: KAS_III; cd00830" /db_xref="CDD:29417" misc_feature order(1096352..1096354,1096358..1096360,1096385..1096387, 1096394..1096396,1096418..1096438,1096460..1096462, 1096469..1096474,1096481..1096486,1096541..1096543, 1096646..1096663,1096679..1096684,1097051..1097053) /locus_tag="Acear_1013" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29417" misc_feature order(1096445..1096447,1096862..1096864,1096952..1096954) /locus_tag="Acear_1013" /note="active site" /db_xref="CDD:29417" misc_feature 1096871..1096873 /locus_tag="Acear_1013" /note="CoA binding pocket [chemical binding]; other site" /db_xref="CDD:29417" gene 1097101..1098048 /locus_tag="Acear_1014" /db_xref="GeneID:9513056" CDS 1097101..1098048 /locus_tag="Acear_1014" /note="COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR017569:IPR004136:IPR013785; KEGG: hor:Hore_10270 enoyl-(acyl-carrier-protein) reductase II; PFAM: 2-nitropropane dioxygenase NPD; SPTR: B8CWW4 Enoyl-(acyl-carrier-protein) reductase II; TIGRFAM: enoyl-(acyl-carrier-protein) reductase II; PFAM: 2-nitropropane dioxygenase; TIGRFAM: enoyl-(acyl-carrier-protein) reductase II" /codon_start=1 /transl_table=11 /product="enoyl-(acyl-carrier-protein) reductase II" /protein_id="YP_003827606.1" /db_xref="GI:302391786" /db_xref="GeneID:9513056" /translation="MLKTELCKQLEIEYPIIQGGMAWIATGELAAAVSNAGGLGIIGA GNAPAEVVREEIKKAKELTDKTYGVNVMLLSPHVDEVIETVYEEEVPVITTGAGNPGK YIDKLKEVGTKIIPVVPSVALAKRMARLDVDAIIAEGTEAGGHIGEVATMPLIPQIVD AIDLPVIAAGGIGDGRGLTAALALGAEGVQVGTRFVCAEECTVHENYKEAIIGARDRD AIVTARSTGHPVRNLKNKLTRQIDKLENKGVSKEELEELGIGRLQNAAKEGDVKEGSV MAGQIAGMVNEEKPAADIIQEFIQEAETVLKEKVELIEK" misc_feature 1097107..1098021 /locus_tag="Acear_1014" /note="putative enoyl-(acyl-carrier-protein) reductase II; Region: enACPred_II; TIGR03151" /db_xref="CDD:132195" misc_feature 1097134..1097799 /locus_tag="Acear_1014" /note="2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin...; Region: NPD_like; cd04730" /db_xref="CDD:73392" misc_feature order(1097158..1097163,1097314..1097316,1097386..1097388, 1097449..1097451,1097512..1097514,1097524..1097529, 1097605..1097613,1097668..1097679) /locus_tag="Acear_1014" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73392" misc_feature 1097530..1097535 /locus_tag="Acear_1014" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73392" misc_feature 1097533..1097535 /locus_tag="Acear_1014" /note="putative catalytic residue [active]" /db_xref="CDD:73392" gene 1098069..1099001 /locus_tag="Acear_1015" /db_xref="GeneID:9513057" CDS 1098069..1099001 /locus_tag="Acear_1015" /EC_number="2.3.1.39" /note="COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterProIPR004410:IPR016035:IPR016036:IPR014043:IPR 001227; KEGG: tte:TTE1473 acyl-carrier-protein S-malonyltransferase; PFAM: Acyl transferase; SPTR: Q8R9V9 (acyl-carrier-protein) S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase" /codon_start=1 /transl_table=11 /product="(acyl-carrier-protein) S-malonyltransferase" /protein_id="YP_003827607.1" /db_xref="GI:302391787" /db_xref="GeneID:9513057" /translation="MSGKTAFLFPGQGAQKVGMGAELVKEFSAAKEVFDAADEALDLD ISKLCFEGPADELKQTENTQPAILTMSIAVYEVLKEKGIQPDTVAGHSLGEYSALVAA GALDFKSAVKLVRKRGQFMEEAVPAGEGAMGAVIGLKREGVQEAVKEGSRFGIVELAN YNTPIQTVISGEKEAVEKTLELAEDTGAKKTVLLDVSGPFHSSLMKSAGDKLAAELEK IEISEPELPVMANVTADYVETPDEIKKALIDQLSGSVYWVDIIELMIDNNLDRVIEAG PGRTLKSFMRRIDRSITALNVRNLSSLEKTLQKL" misc_feature 1098072..1098995 /locus_tag="Acear_1015" /note="Acyl transferase domain; Region: Acyl_transf_1; cl08282" /db_xref="CDD:186816" misc_feature 1098078..1098938 /locus_tag="Acear_1015" /note="malonyl CoA-acyl carrier protein transacylase; Region: fabD; TIGR00128" /db_xref="CDD:188028" gene 1099057..1099806 /locus_tag="Acear_1016" /db_xref="GeneID:9513058" CDS 1099057..1099806 /locus_tag="Acear_1016" /EC_number="1.1.1.100" /note="COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR011284:IPR002198:IPR016040:IPR002347; KEGG: hor:Hore_10290 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: B8CWW6 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl-carrier-protein) reductase" /protein_id="YP_003827608.1" /db_xref="GI:302391788" /db_xref="GeneID:9513058" /translation="MELEGKTAVVTGSSRGIGKAIALSLAEEGASVAVNYPVEAEKEN AQEVVDMIKNLGQEAVTVKANVVQLDEVKKMMKQVKDEFDSIDILVNNAGITNDNLLL RMKEEDWDSVIDVNLKGVFNCTKAVTKIMMKQRSGKIINIASVVGRMGNAGQANYSAS KAGVIGLTKSTAKELASRGIMANAVAPGFIQSRMTDELSEEVQEEMLEAIPLDEFGTP EDVANVVSFLASSKADYITGQVINVAGGMVM" misc_feature 1099057..1099803 /locus_tag="Acear_1016" /note="3-ketoacyl-(acyl-carrier-protein) reductase; Validated; Region: fabG; PRK05557" /db_xref="CDD:180126" misc_feature 1099072..1099800 /locus_tag="Acear_1016" /note="beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs; Region: BKR_SDR_c; cd05333" /db_xref="CDD:187594" misc_feature order(1099090..1099092,1099096..1099107,1099162..1099164, 1099174..1099176,1099246..1099254,1099330..1099341, 1099399..1099401,1099480..1099488,1099525..1099527, 1099537..1099539,1099615..1099620,1099624..1099626, 1099630..1099638) /locus_tag="Acear_1016" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187594" misc_feature order(1099126..1099128,1099138..1099140,1099273..1099275, 1099351..1099362,1099366..1099374,1099381..1099386, 1099393..1099395,1099405..1099410,1099417..1099422, 1099426..1099431,1099438..1099443,1099450..1099452, 1099498..1099521,1099528..1099533,1099540..1099545, 1099552..1099557,1099561..1099578,1099582..1099587, 1099621..1099623,1099684..1099692,1099696..1099707, 1099714..1099716,1099723..1099728,1099732..1099737, 1099747..1099749,1099756..1099794,1099798..1099800) /locus_tag="Acear_1016" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:187594" misc_feature order(1099354..1099362,1099366..1099368,1099372..1099374, 1099381..1099386,1099393..1099395,1099405..1099410, 1099417..1099422,1099429..1099431,1099438..1099443, 1099450..1099452,1099495..1099521,1099528..1099533, 1099540..1099545,1099552..1099557,1099561..1099569, 1099573..1099578) /locus_tag="Acear_1016" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187594" misc_feature order(1099402..1099404,1099486..1099488,1099525..1099527, 1099537..1099539) /locus_tag="Acear_1016" /note="active site" /db_xref="CDD:187594" gene 1099898..1100128 /locus_tag="Acear_1017" /db_xref="GeneID:9513059" CDS 1099898..1100128 /locus_tag="Acear_1017" /note="InterPro IPR003231:IPR009081:IPR006162:IPR006163; KEGG: hor:Hore_10300 acyl carrier protein; PFAM: phosphopantetheine-binding; SPTR: B8CWW7 Acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine attachment site; TIGRFAM: acyl carrier protein" /codon_start=1 /transl_table=11 /product="acyl carrier protein" /protein_id="YP_003827609.1" /db_xref="GI:302391789" /db_xref="GeneID:9513059" /translation="MSVLEQVKEIVVEELAVEPEEVTETASFIDDLGADSLDIVELVM AFEEEFEIEIPDEDAEDIGTVEDAVEYIKSHN" misc_feature 1099898..1100122 /locus_tag="Acear_1017" /note="Phosphopantetheine attachment site; Region: PP-binding; cl09936" /db_xref="CDD:195933" gene 1100203..1101177 /locus_tag="Acear_1018" /db_xref="GeneID:9513060" CDS 1100203..1101177 /locus_tag="Acear_1018" /note="COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136:IPR013785; KEGG: hmo:HM1_2167 2-nitropropane dioxygenase; PFAM: 2-nitropropane dioxygenase NPD; SPTR: B0TGW2 2-nitropropane dioxygenase; PFAM: 2-nitropropane dioxygenase" /codon_start=1 /transl_table=11 /product="2-nitropropane dioxygenase NPD" /protein_id="YP_003827610.1" /db_xref="GI:302391790" /db_xref="GeneID:9513060" /translation="MDLPRLKIGDLVAEIPIVQGGMAVKVSTAPLAAAVAEEGGIGLI AGSGISTDELKAEIRRAQELTEGILGVNIMVAASKFKELVEGSIAEGIDLIVAGAGFS RDLFDMGKESGVEIVPIVSSARLAKISEKLGASAVVVEGKEAGGHLGTDRPMKEILEE VTDAVDIPVIAAGGIIDGADIAETLQLGADGVQMGSRFVATEECEVDDSFKELYIDAE PEDSVMIESPVGLPGRALRNEFYERLGSGEVKTGFHCDYICLKDCSRVYCIIKSLIKA KEGDMTNGLVFAGEETYRINDILPVKEVINNLVDKAKSLLNQEESIDE" misc_feature 1100203..1101162 /locus_tag="Acear_1018" /note="Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]; Region: COG2070" /db_xref="CDD:32253" misc_feature 1100242..1100910 /locus_tag="Acear_1018" /note="2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin...; Region: NPD_like; cd04730" /db_xref="CDD:73392" misc_feature order(1100263..1100268,1100422..1100424,1100494..1100496, 1100557..1100559,1100620..1100622,1100632..1100637, 1100716..1100724,1100779..1100790) /locus_tag="Acear_1018" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73392" misc_feature 1100638..1100643 /locus_tag="Acear_1018" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73392" misc_feature 1100641..1100643 /locus_tag="Acear_1018" /note="putative catalytic residue [active]" /db_xref="CDD:73392" gene 1101170..1102411 /locus_tag="Acear_1019" /db_xref="GeneID:9513061" CDS 1101170..1102411 /locus_tag="Acear_1019" /EC_number="2.3.1.41" /note="COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterProIPR017568:IPR018201:IPR016039:IPR014030:IPR 014031:IPR016038; KEGG: amt:Amet_2753 beta-ketoacyl synthase-like protein; PFAM: Beta-ketoacyl synthase; SPTR: A6TRT6 Beta-ketoacyl synthase-like protein; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl-carrier-protein) synthase II" /protein_id="YP_003827611.1" /db_xref="GI:302391791" /db_xref="GeneID:9513061" /translation="MSNRVVVTGMGTVSPVGIGLKDYWAALEAGESGIDRVTNFDAAE LDSKVGGEVKDFNAQDYMSRKDAKRMDKFAQFAVAAAKIAVEDSDLKIDDSNAEDVGV LVGSGIGGMETFENQTKRLIERGPGRISPFFIPKMISNMAAGQVSIQLGAKGPNATTV SACASATHAIGDAFDIIRRGDAEVMVTGGSEAAITELSYAGFCAMKALSTRNDEPTRA SRPFDEERDGFVMGEGSGILVLESLDSALERGAKIYGEVVGYGMSGDAYHVTAPDPEA DGAARSMQMAIDNSGLDLEDINYINAHGTSTPQNDKLETKAIKDVFGDLAYDVAVSST KSMTGHLLGAAGGIEAIASLLAIEKGVVPPTINYENEDSECDLDYVPNEARELEVKAV LSNSLGFGGHNATLIFAEYQQ" misc_feature 1101176..1102393 /locus_tag="Acear_1019" /note="Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen...; Region: KAS_I_II; cd00834" /db_xref="CDD:29421" misc_feature 1101176..1102393 /locus_tag="Acear_1019" /note="beta-ketoacyl-acyl-carrier-protein synthase II; Region: fabF; TIGR03150" /db_xref="CDD:163158" misc_feature order(1101488..1101490,1101509..1101514,1101524..1101526, 1101530..1101535,1101569..1101571,1101587..1101589, 1101599..1101601,1101611..1101613,1101629..1101631, 1101635..1101637,1101641..1101649,1101683..1101685, 1101692..1101697,1101704..1101706,1101767..1101772, 1101779..1101784,1101956..1101970,1102010..1102012, 1102367..1102369,1102373..1102375) /locus_tag="Acear_1019" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29421" misc_feature order(1101656..1101658,1102076..1102078,1102187..1102189) /locus_tag="Acear_1019" /note="active site" /db_xref="CDD:29421" gene 1102430..1103134 /locus_tag="Acear_1020" /db_xref="GeneID:9513062" CDS 1102430..1103134 /locus_tag="Acear_1020" /EC_number="3.1.26.3" /note="COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR011907:IPR000999:IPR001159:IPR014720; KEGG: hor:Hore_10320 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; PRIAM: Ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein; SPTR: B8CWW9 Ribonuclease III; TIGRFAM: ribonuclease III; PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial" /codon_start=1 /transl_table=11 /product="RNAse III" /protein_id="YP_003827612.1" /db_xref="GI:302391792" /db_xref="GeneID:9513062" /translation="MITAEYKEKLEELQSKIDIYFADLDLLQRALTHKSYANENRDLN LKDNERLEFLGDSVLDIVVSEYMFNRYPDYPEGKLAKMRASVVSAPTLAAKARELDLG RYLLLGHGEEMTGGRKRSSILADAFEALVGSIYLDQDLDIAEDFIMKLMKVDIESAEA GEHIRDYKTTLQEMIQKRSNARPEYYVIEEKGPDHSKEFTVEVKFNDRSLGEGTGSSK KEAQQQAAKNALKKLK" misc_feature 1102448..1103080 /locus_tag="Acear_1020" /note="ribonuclease III; Reviewed; Region: rnc; PRK00102" /db_xref="CDD:178863" misc_feature 1102502..1102906 /locus_tag="Acear_1020" /note="RIBOc. Ribonuclease III C terminal domain. This group consists of eukaryotic, bacterial and archeal ribonuclease III (RNAse III) proteins. RNAse III is a double stranded RNA-specific endonuclease. Prokaryotic RNAse III is important in post-...; Region: RIBOc; cd00593" /db_xref="CDD:29697" misc_feature order(1102574..1102579,1102586..1102591,1102598..1102600, 1102607..1102612,1102619..1102624,1102628..1102636, 1102664..1102666,1102832..1102834,1102859..1102861) /locus_tag="Acear_1020" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29697" misc_feature order(1102574..1102576,1102583..1102585,1102595..1102597, 1102802..1102804,1102811..1102813) /locus_tag="Acear_1020" /note="active site" /db_xref="CDD:29697" misc_feature order(1102583..1102585,1102802..1102804,1102811..1102813) /locus_tag="Acear_1020" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:29697" misc_feature 1102925..>1103080 /locus_tag="Acear_1020" /note="Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase...; Region: DSRM; cd00048" /db_xref="CDD:28930" misc_feature order(1102925..1102927,1102943..1102948,1103075..1103080) /locus_tag="Acear_1020" /note="dsRNA binding site [nucleotide binding]; other site" /db_xref="CDD:28930" gene complement(1103347..1103729) /locus_tag="Acear_1021" /pseudo /db_xref="GeneID:9513063" gene 1103813..1105063 /locus_tag="Acear_1022" /db_xref="GeneID:9513064" CDS 1103813..1105063 /locus_tag="Acear_1022" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: cbi:CLJ_0076 transposase; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; SPTR: C3KS84 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003827613.1" /db_xref="GI:302391793" /db_xref="GeneID:9513064" /translation="MKLAFKFKPNFSHKQLEIVKELSWHCSKLYNTVNYEIKNNEEIK PVYTRLENNFKSNWHTEYLHSHNRQQLFKQLAQDWKSYFNSIEDYNNNPNKYKGKPKP PNFKYLDSNPSEIIFTNLAIRVREDNLLLSLSKEIKSKFQVDSLKFQLLPIIESLTNL DNLQQVRIKRDNLSDNWYLIIIHKVNEKNKAKGNNIMAIDLGLNNLATLTFKDNPESY IIDGKVIKSENRYYNRRITKLQKIRMKQIGNQKFKDTKQIKKLRLKRRNFVADYLHKA SKEIVKLATKNNVDTMVIGDIAGIKQNNKHNKHFVAVPIQRLKNLIEYKAKLEGIKVV FVNEAYTSGCSAIDEEKLNKNNYDKSRRIKRGLFKTGNKVINADVNGSLNIMRKYIKN GTPKMVKQIRDMGEVNTPERLRVS" misc_feature 1103999..1104715 /locus_tag="Acear_1022" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature 1104605..1104838 /locus_tag="Acear_1022" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature 1104761..1104976 /locus_tag="Acear_1022" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 1105513..1105836 /locus_tag="Acear_1023" /db_xref="GeneID:9513065" CDS 1105513..1105836 /locus_tag="Acear_1023" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827614.1" /db_xref="GI:302391794" /db_xref="GeneID:9513065" /translation="MKKGAVLVVVTAAVLTTADTATKLERHQIEMKVHNKILQLKVIK PIIKLQKIRSQVVKKVKIKQTKESKLRVGIMNKERIVKKILQIKSEKKINRKKQVIAG ILFQI" gene 1106318..1107553 /locus_tag="Acear_1024" /db_xref="GeneID:9513066" CDS 1106318..1107553 /locus_tag="Acear_1024" /note="COGs: COG2081 flavoprotein; InterPro IPR004792:IPR013027; KEGG: cce:Ccel_1733 HI0933 family protein; PFAM: HI0933 family protein; SPTR: C7ICE2 HI0933 family protein; PFAM: HI0933-like protein; TIGRFAM: conserved hypothetical protein TIGR00275" /codon_start=1 /transl_table=11 /product="HI0933 family protein" /protein_id="YP_003827615.1" /db_xref="GI:302391795" /db_xref="GeneID:9513066" /translation="MKTEIVVVGGGPAGMMAAGTAAQNGAEVLLLEKNEQLGKKLLIT GKGRCNLTNDCSIERMIENFPETGSFLYSALYTFPNHQLRNFFAELGVPTKVERGDRV FPESDSARDVVDALKGYLKDKGVEIRLKTAVNEILVEEGAVKGVMDRDGNSYLADKVV FTPGGASYPTTGSSGDGYEMLETVGHRIKSIKPSLVPLQAKEGWVASLEGLTLKNVEA GLYLNEEEIDSEFGELLFTDDGVSGPIVLTLSRDVVSRLGEGSLKLKIDLKPALDEQT LDNRLQRDFEKYSRKQFKNSLGDLLPSKLIPVIVDLVSIPADKKVNQITVEERRELMQ LVKELEVTIIGTKGLRQAIVTKGGVMIDEIDPQTMESKLVSDLYLAGEVIDIDAYTGG FNLQAAFSTGYLAGINVVD" misc_feature 1106396..1107535 /locus_tag="Acear_1024" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 1106396..1107535 /locus_tag="Acear_1024" /note="flavoprotein, HI0933 family; Region: TIGR00275" /db_xref="CDD:161797" gene 1107904..1108470 /locus_tag="Acear_1025" /db_xref="GeneID:9513067" CDS 1107904..1108470 /locus_tag="Acear_1025" /note="KEGG: hor:Hore_10330 hypothetical protein; SPTR: B8CWX0 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827616.1" /db_xref="GI:302391796" /db_xref="GeneID:9513067" /translation="MFRGFYNFILRLIERIESLLIKGTISLLILLITVQIALNDPLSA KLQFENSYLQQLKEIPVVQQVVTYLQRNNSGVKQTAELKEVTQSESVTTDKQGIVELK VLNSTTDQQIKVFINKKLRKTFSKGQARILVEPGDKIILDTRGINKGLWFQVTALSDN LQNFNGGERFWIKNDLYTLEEVKVRKRY" gene 1108705..1109121 /locus_tag="Acear_1026" /db_xref="GeneID:9513068" CDS 1108705..1109121 /locus_tag="Acear_1026" /note="InterPro IPR015111; KEGG: pth:PTH_1631 hypothetical protein; PFAM: HutP family protein; SPTR: A5D1T0 Putative uncharacterized protein; PFAM: HutP" /codon_start=1 /transl_table=11 /product="HutP family protein" /protein_id="YP_003827617.1" /db_xref="GI:302391797" /db_xref="GeneID:9513068" /translation="MKDDQASKEVATAAIKMSLTDRKEEKELKKEYAAEDLKVAAVDF GGEFTSSVKKVIERAIVAAKRESVIKDTHTDQGAVAGATKEALSQITDKAIGFNVGGK IGVARRGDHISVAVFFAIGLLHLNEMAIGLGHRAVP" misc_feature 1108729..1109109 /locus_tag="Acear_1026" /note="HutP; Region: HutP; cl07944" /db_xref="CDD:186718" gene 1109145..1109513 /locus_tag="Acear_1027" /db_xref="GeneID:9513069" CDS 1109145..1109513 /locus_tag="Acear_1027" /EC_number="5.4.99.5" /note="COGs: COG4401 Chorismate mutase; InterPro IPR008243:IPR013813; KEGG: hor:Hore_10340 chorismate mutase; PFAM: Chorismate mutase of the AroH class; SPTR: C7ICD9 Chorismate mutase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1" /codon_start=1 /transl_table=11 /product="chorismate mutase" /protein_id="YP_003827618.1" /db_xref="GI:302391798" /db_xref="GeneID:9513069" /translation="MSSEVVAIRGAITVDKNTKEDILTSTQELLTEILERNQLDEEDI ISIFFTVTQDLDAAFPAQAARELGLDFIPLLCANEIDVPGAISKCVRILIHINAGEKL EEVEHIYLKDAKKLRPDLVD" misc_feature 1109157..1109504 /locus_tag="Acear_1027" /note="Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In...; Region: AroH; cd02185" /db_xref="CDD:100026" misc_feature order(1109157..1109165,1109169..1109171,1109274..1109282, 1109307..1109312,1109319..1109324,1109337..1109339, 1109361..1109366,1109370..1109372,1109376..1109393, 1109427..1109429) /locus_tag="Acear_1027" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100026" misc_feature order(1109169..1109171,1109319..1109321,1109328..1109330, 1109337..1109339,1109367..1109372,1109379..1109384, 1109400..1109402,1109415..1109420,1109469..1109471, 1109490..1109492) /locus_tag="Acear_1027" /note="active site" /db_xref="CDD:100026" gene 1109527..1110606 /locus_tag="Acear_1028" /db_xref="GeneID:9513070" CDS 1109527..1110606 /locus_tag="Acear_1028" /EC_number="2.6.1.9" /note="COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterProIPR005861:IPR015424:IPR004839:IPR001176:IPR 015421; KEGG: mta:Moth_0515 histidinol phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Q2RL44 Histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase" /codon_start=1 /transl_table=11 /product="histidinol phosphate aminotransferase apoenzyme" /protein_id="YP_003827619.1" /db_xref="GI:302391799" /db_xref="GeneID:9513070" /translation="MIREDILDIKPYVPGKPIEEVKRELGIDDVIKLASNENPLGPSK KAVEAMKEAASGVHIYPHGDCYVLKEALSDRLGVSEEELMFGNGSDDILKFIGEAFVN TGEEVIVAEPSFSEYEFATNIMGGDVVKVPLKDYTHNLSAMLETITDQTKLVFICNPN NPTGTTVTKQEVDSFMAEVPDDVVVVFDEAYKEYVTSDDYPETINYLTDYDNVIILRT FSKIYGLAGLRIGYAISNKELIGYLNRVRPPFEVNSMAQTAAYAALQDQDHLNKSKEI NTEGKKYLYQEFERLGLEYVPTETNFILVDVKKDASEVFADMQKQGVIIRNAQAFGYE TMIRVTIGTDEQNQRLINTLEQVLA" misc_feature 1109533..1110591 /locus_tag="Acear_1028" /note="histidinol-phosphate aminotransferase; Region: hisC; TIGR01141" /db_xref="CDD:162223" misc_feature 1109617..1110594 /locus_tag="Acear_1028" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature order(1109788..1109796,1109866..1109868,1110007..1110009, 1110097..1110099,1110178..1110180,1110184..1110189, 1110211..1110213) /locus_tag="Acear_1028" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature order(1109797..1109799,1109896..1109898,1110079..1110081, 1110205..1110213,1110292..1110294,1110301..1110303) /locus_tag="Acear_1028" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature 1110187..1110189 /locus_tag="Acear_1028" /note="catalytic residue [active]" /db_xref="CDD:99734" gene 1110629..1111642 /locus_tag="Acear_1029" /db_xref="GeneID:9513071" CDS 1110629..1111642 /locus_tag="Acear_1029" /EC_number="2.5.1.54" /note="COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268:IPR006218:IPR013785; KEGG: tpd:Teth39_0984 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: C6Q6Z9 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase" /codon_start=1 /transl_table=11 /product="3-deoxy-D-arabinoheptulosonate-7-phosphate synthase" /protein_id="YP_003827620.1" /db_xref="GI:302391800" /db_xref="GeneID:9513071" /translation="MVIVMEDNATERQIENVIKRVEELGFEPHLSQGDVKTIIGVIGE NKYEAMESIASLRGIEKVVEITKPYKLSGKQFKKEPTVVDVDGVKVGGESVTVMAGPC AVESKEQLFEAAEVVKENGAQILRGGAYKPRTSPYSFQGLKEKGLKFLAEARERTGLK IVTEVMDTRSVELVAKYADIFQIGARNMQNYPLLREVGKADKPVLLKRGMTATYKELL LSAEYVMAGGNHDVILCERGIRTFSEYTRNTVDISTIPVIKELSHLPIIVDPSHGTGK WSLVDSVSKGAIAAGADGLLIEVHPDPATALSDGPQSLTPTNFAKLMDEMQPIAEAVN KKL" misc_feature 1110632..1111636 /locus_tag="Acear_1029" /note="3-deoxy-7-phosphoheptulonate synthase; Reviewed; Region: PRK08673" /db_xref="CDD:181535" misc_feature 1110836..1111606 /locus_tag="Acear_1029" /note="NeuB family; Region: NeuB; cl00496" /db_xref="CDD:186036" gene 1111656..1112762 /locus_tag="Acear_1030" /db_xref="GeneID:9513072" CDS 1111656..1112762 /locus_tag="Acear_1030" /EC_number="1.3.1.12" /note="COGs: COG0287 prephenate dehydrogenase; InterPro IPR003099:IPR016040:IPR002912; KEGG: hmo:HM1_1926 prephenate dehydrogenase, PFAM: prephenate dehydrogenase; amino acid-binding ACT domain protein; PRIAM: prephenate dehydrogenase; SPTR: B0TFQ3 prephenate dehydrogenase, PFAM: prephenate dehydrogenase; ACT domain" /codon_start=1 /transl_table=11 /product="prephenate dehydrogenase" /protein_id="YP_003827621.1" /db_xref="GI:302391801" /db_xref="GeneID:9513072" /translation="MNRIDRIAIIGVGLLGASLGLACKRFTSVTEIVGYDQNKDHLKE ALEIGAIDGIIDNLENNSLLGEVDLVVLATPISVIPDILNKIQKQVRPGTIITDVGST KGWLMEKINNQLRSDITYIPGHPMTGSEVSGPGGADAYLFENAVYVLTPLEPTPEDRQ QALVELLEEIGAKLLFMSPAEHDRIVAAVSHLPHVMACTLVEAVGQAARDDDHVFSLA AGGFKDTTRIAAGSPRMWTDICLSNSEEILEMIRTFKGELAEFERVLAANKGEELFNR FKQTQALRQEIPEKKRGLIASTYELVVTIPDQPKAIGKVTSLLGEAGINISDIELLQV RESGGTLRLAFADGEALKLAEDLLREAGYKLKVK" misc_feature 1111740..1112510 /locus_tag="Acear_1030" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 1111746..1112744 /locus_tag="Acear_1030" /note="prephenate dehydrogenase; Validated; Region: PRK06545" /db_xref="CDD:180613" misc_feature 1112550..1112750 /locus_tag="Acear_1030" /note="C-terminal ACT domain of the monofunctional, NAD dependent, prephenate dehydrogenase (PDH); Region: ACT_PDH-BS; cd04909" /db_xref="CDD:153181" gene 1112779..1114062 /locus_tag="Acear_1031" /db_xref="GeneID:9513073" CDS 1112779..1114062 /locus_tag="Acear_1031" /EC_number="2.5.1.19" /note="COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; InterPro IPR006264:IPR016228:IPR001986:IPR013792; KEGG: drm:Dred_1151 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); SPTR: C0GG08 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase" /codon_start=1 /transl_table=11 /product="3-phosphoshikimate 1-carboxyvinyltransferase" /protein_id="YP_003827622.1" /db_xref="GI:302391802" /db_xref="GeneID:9513073" /translation="MELKIKPKDKLQGTIKVPGDKSISHRSVMLGALAEGKTEVTGFL TGEDCLNTARAFQKMGVEIEGLGSEEMVIHGVGLNGLQEPESILDLGNSGTSMRLMLG ILAGQDFYAVVTGDESLSKRPMARVVEPLGDMGAEIYGRDGGNLAPLTVIGQNLTNQE YQSPVASAQVKSCILLAGLYADGTTTVIEPAKSRDHTERMLEYFGTELNIDGLEVSVI GQPKLKGQKVVVPSDISSASFFLVAALINQQAELILEDVGLNPTRAGILEVLTAMEAD YELLDKRLENQEPIADIKVNSSNLQATTIGGAVIPKLIDELPILAVAATQAEGETVIK DAEELRVKETDRISAMVTELRRLGVEVEEREDGMVIPGPQSIKGGCSCRSYDDHRIAM SLAVAGLIAQEEIEITNADCIKTSFPNFVELLKDI" misc_feature 1112779..1114059 /locus_tag="Acear_1031" /note="3-phosphoshikimate 1-carboxyvinyltransferase; Provisional; Region: PRK02427" /db_xref="CDD:179423" misc_feature 1112809..1114059 /locus_tag="Acear_1031" /note="EPSP synthase domain. 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EC 2.5.1.19) catalyses the reaction between shikimate-3-phosphate (S3P) and phosphoenolpyruvate (PEP) to form 5-enolpyruvylshkimate-3-...; Region: EPSP_synthase; cd01556" /db_xref="CDD:30129" misc_feature order(1112827..1112838,1113466..1113477) /locus_tag="Acear_1031" /note="hinge; other site" /db_xref="CDD:30129" misc_feature order(1112839..1112844,1112854..1112856,1113052..1113054, 1113058..1113063,1113142..1113144,1113277..1113285, 1113346..1113348,1113355..1113357,1113721..1113723, 1113790..1113792,1113802..1113807,1113814..1113816, 1113940..1113945,1114021..1114023) /locus_tag="Acear_1031" /note="active site" /db_xref="CDD:30129" gene 1114148..1114819 /locus_tag="Acear_1032" /db_xref="GeneID:9513074" CDS 1114148..1114819 /locus_tag="Acear_1032" /EC_number="2.7.4.14" /note="COGs: COG0283 Cytidylate kinase; InterPro IPR003136:IPR000623:IPR011994; KEGG: bay:RBAM_021040 cytidylate kinase; PFAM: cytidylate kinase region; shikimate kinase; SPTR: A3F449 Cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase" /codon_start=1 /transl_table=11 /product="cytidylate kinase" /protein_id="YP_003827623.1" /db_xref="GI:302391803" /db_xref="GeneID:9513074" /translation="MQSDIVITIDGPAGAGKSTVAKRVAEQLGIIYIDTGAMYRALTL KALREDIDLNNEDELAHLAHRTEIELEKIDGEDKVLLDEEDVTEEIRSQKVSNYVSVV AKVSSVREELVNLQQEMASNKGVIMDGRDIGTVVLPDADLKIFLTASVEERARRRYEE LKEKGKDVEFDELKDEILRRDRLDQERKVAPLKKAEDAIELDSTNLTVEEVLRQVIKL CQEEL" misc_feature 1114148..1114816 /locus_tag="Acear_1032" /note="cytidylate kinase; Provisional; Region: cmk; PRK00023" /db_xref="CDD:178800" misc_feature 1114163..1114759 /locus_tag="Acear_1032" /note="Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor; Region: CMPK; cd02020" /db_xref="CDD:73296" misc_feature order(1114472..1114474,1114535..1114540,1114706..1114708) /locus_tag="Acear_1032" /note="CMP-binding site; other site" /db_xref="CDD:73296" misc_feature order(1114685..1114687,1114697..1114699) /locus_tag="Acear_1032" /note="The sites determining sugar specificity; other site" /db_xref="CDD:73296" gene 1114819..1115415 /locus_tag="Acear_1033" /db_xref="GeneID:9513075" CDS 1114819..1115415 /locus_tag="Acear_1033" /note="COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR004552:IPR002123; KEGG: hor:Hore_10400 1-acylglycerol-3-phosphate O-acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: B8CWX7 1-acylglycerol-3-phosphate O-acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases" /codon_start=1 /transl_table=11 /product="1-acyl-sn-glycerol-3-phosphate acyltransferase" /protein_id="YP_003827624.1" /db_xref="GI:302391804" /db_xref="GeneID:9513075" /translation="MRSDSAVYNVGHFLTNIFFRFVTGWQIEGRGNIPQEGPLIVVSN HISNWDPVIISSALTRRIQFVAKKELFEIPVVGGFLDYIDTIPIRRGRPDRKALKRAF DLLESEGCLGLFPEGTRSKSGKLKKAKRGIVMIALKSEAPILPLGLRDTDNPFSQKVQ INIGQPFTLEQYYGKDLDKKEMKEVGSEIMDEVRQLIE" misc_feature 1114867..1115370 /locus_tag="Acear_1033" /note="Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like; Region: LPLAT_AGPAT-like; cd07989" /db_xref="CDD:153251" misc_feature order(1114951..1114953,1114960..1114962,1114966..1114968, 1115014..1115025,1115167..1115175) /locus_tag="Acear_1033" /note="putative acyl-acceptor binding pocket; other site" /db_xref="CDD:153251" gene 1115457..1117139 /locus_tag="Acear_1034" /db_xref="GeneID:9513076" CDS 1115457..1117139 /locus_tag="Acear_1034" /EC_number="2.7.13.3" /note="COGs: COG3275 Putative regulator of cell autolysis; InterProIPR003594:IPR005467:IPR011620:IPR010559:IPR 004358; KEGG: hor:Hore_10410 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; PRIAM: Histidine kinase; SMART: ATP-binding region ATPase domain protein; SPTR: B8CWX8 Signal transduction histidine kinase, LytS; PFAM: Histidine kinase; 5TMR of 5TMR-LYT; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /codon_start=1 /transl_table=11 /product="signal transduction histidine kinase, LytS" /protein_id="YP_003827625.1" /db_xref="GI:302391805" /db_xref="GeneID:9513076" /translation="MILDLLITLLKNMSVIAVFAYLLSRTDTFKKIVYGEPSLKIKFF LILFFGILSALGTFLGVYIFNAYANIRAIGVVVAGFLGGPFVGLGAGLIGGLHRYTLG GFTAFACAIGTITSGLIAGLTRKYRSFDQINTELAFWVGIGVEIIEMGYVLFLSTPFA EAQQLVTVIAVPMILNNAIGIAIFVNILQTAKKEEEKVKALQSQKALEIANRTLPHLQ EGLNYDSAEKTADTILMMTNIKAVSITNLSEVLAHKGLAEDHHQPGEDILTDATKRTL ETGEVSVAETAYDIGCPVVDCNLAAAVMAPLKFQDEIIGTLKFYKDREESIKEVEIEL ATGVANLLSTQIKIARLKKEAQLATQAELKALQAQIHPHFLFNALNTISSFCRTRPQQ ARDLLINLSQFFRRTLKSNKKIISLAEELEHIENYIAIEKARFGDQLEVKIDIEDELL EVQLPNFILQPLVENAVRHGVSPQPGGGKVEIIAQDNDDEVEIVIKDNGIGIENERLT EILQEGTGEGMGIGLANVNSRLEKIYNSSYGLQIESRLRKGTEIYITIPKQS" misc_feature 1115460..1117133 /locus_tag="Acear_1034" /note="Putative regulator of cell autolysis [Signal transduction mechanisms]; Region: LytS; COG3275" /db_xref="CDD:33086" misc_feature 1115613..1115822 /locus_tag="Acear_1034" /note="Protein of unknown function (DUF1393); Region: DUF1393; cl01942" /db_xref="CDD:194214" misc_feature <1116372..1116509 /locus_tag="Acear_1034" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" misc_feature 1116540..1116785 /locus_tag="Acear_1034" /note="Histidine kinase; Region: His_kinase; pfam06580" /db_xref="CDD:191560" misc_feature 1116828..1117124 /locus_tag="Acear_1034" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(1116837..1116839,1116849..1116851,1116858..1116860, 1116939..1116941,1116945..1116947,1116951..1116953, 1116957..1116962,1117014..1117025,1117080..1117082, 1117086..1117088,1117101..1117106,1117110..1117112) /locus_tag="Acear_1034" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 1116849..1116851 /locus_tag="Acear_1034" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(1116951..1116953,1116957..1116959,1117014..1117016, 1117020..1117022) /locus_tag="Acear_1034" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene 1117153..1117926 /locus_tag="Acear_1035" /db_xref="GeneID:9513077" CDS 1117153..1117926 /locus_tag="Acear_1035" /note="COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492:IPR011006; KEGG: hor:Hore_10420 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; SPTR: B8CWX9 Two component transcriptional regulator, LytTR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, LytTR family" /protein_id="YP_003827626.1" /db_xref="GI:302391806" /db_xref="GeneID:9513077" /translation="MKLDVVVVDDELPARDELKFLLSETDELEVIAEAATGQQALELI ADKDPDVAFLDIQMPGKSGIEVTEEILTWDQKPLIIFITAYDDYAIKAFELNAIDYLL KPFSKERFEKTIERILTKQQTESKEAIDQQLNQLIASMESAEDSLIRIPVHSKQGRIK LLDKEDIIAAYTKEGDVYIKTNTEEYCSDFTLSALEDTLPTPYFFRVHRSYLANLKEV SEIIPWFKGKYRLVMNDELESELPVSRNKIKRLKEIINL" misc_feature 1117159..1117923 /locus_tag="Acear_1035" /note="putative two-component response-regulatory protein YehT; Provisional; Region: PRK11697" /db_xref="CDD:183278" misc_feature 1117168..1117506 /locus_tag="Acear_1035" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature order(1117177..1117182,1117315..1117317,1117339..1117341, 1117399..1117401,1117450..1117452,1117459..1117464) /locus_tag="Acear_1035" /note="active site" /db_xref="CDD:29071" misc_feature 1117315..1117317 /locus_tag="Acear_1035" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature order(1117324..1117329,1117333..1117341) /locus_tag="Acear_1035" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature 1117459..1117467 /locus_tag="Acear_1035" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature 1117621..1117920 /locus_tag="Acear_1035" /note="LytTr DNA-binding domain; Region: LytTR; cl04498" /db_xref="CDD:156100" gene 1118047..1119477 /locus_tag="Acear_1036" /db_xref="GeneID:9513078" CDS 1118047..1119477 /locus_tag="Acear_1036" /note="COGs: COG1966 carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: cbl:CLK_2726 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: B1L1Z0 carbon starvation protein CstA; PFAM: carbon starvation protein CstA" /codon_start=1 /transl_table=11 /product="carbon starvation protein CstA" /protein_id="YP_003827627.1" /db_xref="GI:302391807" /db_xref="GeneID:9513078" /translation="MVSFISGLIILIVGYLTYGKFIGRIFGEDETKKTPAITKEDGVD YVPLGWARIFLIQLLNIAGLGPIFGAISGALWGPVAFIWIALGSIFAGGVHDYLAGML SVRNDGATISEIVGEYLGEGARKFMRGFSVILLILVGTVFMTGPAKLLANLTPNMITL NVWLSIIIVYYFLATILPVDKIIAKFYPVLGASLLIMALGVGGGLVIGDYQIPEIAFN NLHPESLSIWPLMFVTIACGAISGFHATQSPLMARCLKNERDGRKVFYGAMIAEGVIA MIWAAAAMTFFGGTGELATAMSNLGGPAGIVKEISDSMLGIVGGILAMLGVVALPISS GDTAFRSARLILADIFDLEQVASKNRLKLALPLFMIGTLLSQMDFSIIWRYFAWSNQT LAMIALWAGAAYLAKHNKLHWIATIPATFMTAVSVSYIITAPEGLGLSVTIATVCGLL TAGGALVWFLVNNNTAVVSKEQVKKN" misc_feature 1118056..1119459 /locus_tag="Acear_1036" /note="Carbon starvation protein CstA; Region: CstA; cl00856" /db_xref="CDD:193955" gene 1119735..1121765 /locus_tag="Acear_1037" /db_xref="GeneID:9513079" CDS 1119735..1121765 /locus_tag="Acear_1037" /note="COGs: COG0539 Ribosomal protein S1; InterProIPR003451:IPR003029:IPR016027:IPR000110:IPR 012340; KEGG: hor:Hore_10450 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; RNA binding S1 domain protein; SPTR: B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; S1 RNA binding domain; TIGRFAM: ribosomal protein S1; (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)" /codon_start=1 /transl_table=11 /product="hydroxymethylbutenyl pyrophosphate reductase" /protein_id="YP_003827628.1" /db_xref="GI:302391808" /db_xref="GeneID:9513079" /translation="MEIILADHAGFCFGVRRAMRLTMEAGENKEEKTRTLGPLIHNPQ AVDRLQELGVGIVDTIEEVEEGTVIIRSHGVPPEVLAKAEDKDLNILDATCPFVKKAQ ENASKLYQEGYQVIVSGDKKHPEVTAILGSTDHQAVVVEEEEDLEKLPKNMDKVGVIA QTTQSIKKFKELVTKLMDRTEELKIYNTICTTTHERQAAAGKLAAEVGLMIVIGGYNS ANTNRLAEICDEAGAKTYHVETAEELSRDWFYNIEKVGVTAGASTPNWIIKEVVSRME DIKKEENVEKLDSKAQDTDIERGEALTGTVEQITDDEVYVDIGAKSEGIIPSHELSNQ QFESPSDVVQEGEEVEVQVLNQENEDGNIVLSKKKQDQEKSWQRVEKVYENDEIIEAE ITKEVKGGLVADVGLRGFIPASHVAIEYVEDLSQYVGETLQLKIIEVERDNNNVVLSR KEVLEEERAKKKEEIFASLEEGEVIEGRVTKLVDFGAFVDIGGVEGLLHISEMSWGRI DHPSDVLEEAQETEVKVLGVKPEEERISLGLKQILPDPWEEFLDNYNEGEVISGKITK TVDFGAFMEIESGVEGLIHISQLSHRHVANTEEVVTAGDEVEAKIINIEPDERKVGLS LKELEDKEEQKSQDKSQEKSQQKDVDEFIDDDDEGTGVTIGDMFGELFEEEQ" misc_feature 1119735..1121600 /locus_tag="Acear_1037" /note="4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed; Region: PRK00087" /db_xref="CDD:178853" misc_feature 1119735..1120562 /locus_tag="Acear_1037" /note="LytB protein; Region: LYTB; cl00507" /db_xref="CDD:193845" misc_feature 1120629..1120838 /locus_tag="Acear_1037" /note="S1_RPS1_repeat_ec1_hs1: Ribosomal protein S1 (RPS1) domain. RPS1 is a component of the small ribosomal subunit thought to be involved in the recognition and binding of mRNA's during translation initiation. The bacterial RPS1 domain architecture...; Region: S1_RPS1_repeat_ec1_hs1; cd05687" /db_xref="CDD:88442" misc_feature order(1120653..1120655,1120677..1120679,1120707..1120709, 1120713..1120715) /locus_tag="Acear_1037" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88442" misc_feature 1120890..1121087 /locus_tag="Acear_1037" /note="S1_RPS1_repeat_ec2_hs2: Ribosomal protein S1 (RPS1) domain. RPS1 is a component of the small ribosomal subunit thought to be involved in the recognition and binding of mRNA's during translation initiation. The bacterial RPS1 domain architecture...; Region: S1_RPS1_repeat_ec2_hs2; cd04465" /db_xref="CDD:88430" misc_feature order(1120914..1120916,1120938..1120940,1120962..1120964, 1120968..1120970) /locus_tag="Acear_1037" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88430" misc_feature 1121145..1121348 /locus_tag="Acear_1037" /note="S1_RPS1_repeat_ec3: Ribosomal protein S1 (RPS1) domain. RPS1 is a component of the small ribosomal subunit thought to be involved in the recognition and binding of mRNA's during translation initiation. The bacterial RPS1 domain architecture consists of...; Region: S1_RPS1_repeat_ec3; cd05688" /db_xref="CDD:88443" misc_feature order(1121172..1121174,1121196..1121198,1121223..1121225, 1121229..1121231) /locus_tag="Acear_1037" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88443" misc_feature 1121403..1121591 /locus_tag="Acear_1037" /note="S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain...; Region: S1_like; cl09927" /db_xref="CDD:195927" misc_feature order(1121427..1121429,1121451..1121453,1121481..1121483, 1121487..1121489) /locus_tag="Acear_1037" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88416" gene 1121894..1122580 /locus_tag="Acear_1038" /db_xref="GeneID:9513080" CDS 1121894..1122580 /locus_tag="Acear_1038" /note="InterPro IPR011672; KEGG: hor:Hore_10460 protein of unknown function (DUF1614); PFAM: protein of unknown function DUF1614; SPTR: B8CWY3 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1614)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827629.1" /db_xref="GI:302391809" /db_xref="GeneID:9513080" /translation="MSFGILLLVAAGILIYLGFAERILDRMYLTDSQALIFIGLLIAG SYIDIPITNTPPITINVGGAILPVVLGIYILVQADYREVVRALISIIATGGVIYALTQ IYQFEEGHTLLDPSYLFGVIAGITAYLTSRSRRSAFLSGTLGFLLYDLIHVWQITFGG VTGRADIGGAGALDTIILAGLIAVVLTEIVGESRERLETELTENNQQEDRRDLDKMEV GDLNGGEDDE" misc_feature <1122074..1122451 /locus_tag="Acear_1038" /note="Protein of unknown function (DUF1614); Region: DUF1614; cl01694" /db_xref="CDD:154543" gene 1122573..1123676 /locus_tag="Acear_1039" /db_xref="GeneID:9513081" CDS 1122573..1123676 /locus_tag="Acear_1039" /note="InterPro IPR010897; KEGG: hor:Hore_10470 stage II sporulation P family protein; PFAM: Stage II sporulation P family protein; SPTR: B8CWY4 Stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P" /codon_start=1 /transl_table=11 /product="stage II sporulation protein P" /protein_id="YP_003827630.1" /db_xref="GI:302391810" /db_xref="GeneID:9513081" /translation="MSRYSTKVSVLVLTFLLLFSTLALAAEESPDYFTVVDQKGNTVF KTEMKVHKGDWYIGPDNKKYTVVEVKEDKAVAEYDREVDLISEDSKLPSALSELSTSE APLAKGKDKKTVALYHTHSSESFVPTSGTHSEKGLGDIHNVVNKLATELEQKGVKVIN AGESNGPHDGGAYARSRRTAKKLAQKSPDAIFDVHRDGVPDKSQYLTKVNGKQVAKVR LVVGRQNPGMKANDKFAKQLKYVTDKKYPGLVKGIYYAKGSYNQDLSPRATLLEFGTH TITEDDAKESTVFFSNAVTSLISAQAQGAENVTNEQNSGAFRSLLIILGVVIIGMLGY LFANEGSLNGVINRIKEFFGREFAGISDGNDEE" misc_feature 1122912..1123457 /locus_tag="Acear_1039" /note="stage II sporulation protein P; Region: spore_II_P; TIGR02867" /db_xref="CDD:163050" gene 1123712..1124608 /locus_tag="Acear_1040" /db_xref="GeneID:9513082" CDS 1123712..1124608 /locus_tag="Acear_1040" /note="KEGG: hor:Hore_10480 hypothetical protein; SPTR: B8CWY5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827631.1" /db_xref="GI:302391811" /db_xref="GeneID:9513082" /translation="MKYGAMIIISTVLGTLARLWMLRIDYRQYPGYPHGYAVHLALGF IAAGLGGLVVPALLADEYVAITFLALAAQQFSNIRDMERKFLTELEETELVSRGSAYI EGIAKVFEARNYLAMLVAFISSIGYNFFSWPGAVAAGIATSLILQQAMTEDIIQDIAE VKVVDLEFIGPGGANIAIDEVVIMNVGLKESLQHWKEGGIGIVIDPKDDNARATLANI GQRQAIIHDVITQLGVKLDTGVQDYTPLARLNLDTGRVCIIIVPIEPDEKWVKEAVEN TPVLESSKRKPLATEAGQSAAD" gene 1124621..1124821 /locus_tag="Acear_1041" /db_xref="GeneID:9513083" CDS 1124621..1124821 /locus_tag="Acear_1041" /note="KEGG: hor:Hore_10490 hypothetical protein; SPTR: B8CWY6 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827632.1" /db_xref="GI:302391812" /db_xref="GeneID:9513083" /translation="MDVNLTNNILAIVTLKGDEAKVDGGYAPVFYAEDEEELEYIAMI LSRLTFSMAHNLGNGVYILVKH" gene 1124842..1125309 /locus_tag="Acear_1042" /db_xref="GeneID:9513084" CDS 1124842..1125309 /locus_tag="Acear_1042" /note="KEGG: swo:Swol_1336 hypothetical protein; SPTR: Q0AXB0 Putative uncharacterized protein; PFAM: protein of unknown function (DUF3189)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827633.1" /db_xref="GI:302391813" /db_xref="GeneID:9513084" /translation="MKIIYYDSTGRYLAVIAAAIHLGQLDSNGGLPEWNQLEELTYFN SDDRIKAGEIIFIGRDQLGNDIYILGSEGVGGVIEKAISGIKRIFNIEVEDIFVDLTK YENWRFNLGLVIKSLNFSFLANRLIYNNLTDFFSEVKEIVSEIKGRQVDESNL" misc_feature 1124845..1125285 /locus_tag="Acear_1042" /note="Protein of unknown function (DUF3189); Region: DUF3189; pfam11385" /db_xref="CDD:151825" gene 1125293..1125757 /locus_tag="Acear_1043" /db_xref="GeneID:9513085" CDS 1125293..1125757 /locus_tag="Acear_1043" /note="KEGG: tex:Teth514_1985 hypothetical protein; SPTR: C6Q3K9 Putative uncharacterized protein; PFAM: protein of unknown function (DUF3189)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827634.1" /db_xref="GI:302391814" /db_xref="GeneID:9513085" /translation="MKVIYNCYGSAHSSVLAAGIHVGLLPEDRVPTFGEITALPHYDQ TETEEIGTIYYFGEDELGSQVYILGMKSSPKVVKRAIFSMLEEFDIDRTELVLVDSLP YVNNMTRIGGFLSRGLGLVKIGRPLTVYGLQKSYSRFVNLVQGVKKRLGYIY" misc_feature 1125296..1125739 /locus_tag="Acear_1043" /note="Protein of unknown function (DUF3189); Region: DUF3189; pfam11385" /db_xref="CDD:151825" gene 1125865..1127178 /locus_tag="Acear_1044" /db_xref="GeneID:9513086" CDS 1125865..1127178 /locus_tag="Acear_1044" /note="COGs: COG1625 Fe-S oxidoreductase related to NifB/MoaA family; InterPro IPR007197:IPR007549; KEGG: drm:Dred_1159 hypothetical protein; PFAM: protein of unknown function DUF512; radical SAM domain protein; SPTR: A4J3P0 Putative uncharacterized protein; PFAM: protein of unknown function (DUF512); TIGRFAM: FeS-containing Cyanobacterial-specific oxidoreductase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827635.1" /db_xref="GI:302391815" /db_xref="GeneID:9513086" /translation="MEEEPYVEITDIRPDSIADELDIESGDKLLRINDQQIRDYIDYR FLSTDLYLELLIRKKNGEEWLYEIEKDYDEDLGLEFSSIIYDGLKKCNNNCIFCFVDQ SPAGLRETLNLKDDDYRFSFLQGSYITLTNLAEEEINRIKRLHLSPLYVSVHTTDPEL RVRMMHNKKAGDILPKLRELVEAGIEFHTQIVLCPEINDGQELDRTIENLIELTPAVR SLAIVPVGLTEYRSGLYSLRSFTAQEAEEVIEQVAKWQEKLAQRGENFIYLADEFYLL ADRELPAVEDYNGFVQLENGVGMIRLFWQQFEEAADQLPASLNEEADFTLITGELGAE ALRPVIDRLNEIEKLSLNLLIVENKFFGSQVTVTGLLAGEDIIKAIEEAEVADKIVLP AVLLNDDDLFIDDLKLSDLENRFPQLEFILVDNDAENLVNRLMNI" misc_feature 1125889..1127046 /locus_tag="Acear_1044" /note="putative FeS-containing Cyanobacterial-specific oxidoreductase; Region: cyano_FeS_chp; TIGR03279" /db_xref="CDD:132322" misc_feature 1126135..1126488 /locus_tag="Acear_1044" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" misc_feature 1126531..1127046 /locus_tag="Acear_1044" /note="Protein of unknown function (DUF512); Region: DUF512; pfam04459" /db_xref="CDD:146883" gene 1127196..1128512 /locus_tag="Acear_1045" /db_xref="GeneID:9513087" CDS 1127196..1128512 /locus_tag="Acear_1045" /note="COGs: COG1160 GTPase; InterProIPR005225:IPR016484:IPR003593:IPR002917:IPR 006073:IPR015946; KEGG: aoe:Clos_1399 GTP-binding protein EngA; PFAM: GTP-binding protein HSR1-related; SMART: AAA ATPase; SPTR: A8MH56 GTP-binding protein engA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain" /codon_start=1 /transl_table=11 /product="ribosome-associated GTPase EngA" /protein_id="YP_003827636.1" /db_xref="GI:302391816" /db_xref="GeneID:9513087" /translation="MSKPVVAIVGRPNVGKSTLFNRIVGNRISIVEDEPSITRDRLYG EGEWLDNHFLVVDTGGLDLDSEAELKDEVRQQAELAIEEAEVVLFVVDGRTGIKPMDR EVANLLRRSNKPIILTVNKVDSKELEEKVKYDFYELGLGEPVAISAKHALNTGDLLDE VISHFSTEETGEYDEDTIRISVIGRPNVGKSSLVNSILGKERVIVNDVPGTTRDAIDT YFEVGDNQFVIIDTAGMRKRSKVEAGIEKYSVIRSLKAVDRSDVALMVLDATQGITQQ DKKIAGYAHDQGKAMVIAVNKWDLIKKETNIDQRYADEIRYEASFINYAPITFVSALT GQRVLEILDIVEYAAEQYSRRIKTNVLNNVIKEAISKHQPPSQKGRRLKVYYATQPRV KPPLIILFVNDPTLLRQSYKRYLKNSIRKSFGFDGTPLKIIARNRK" misc_feature 1127202..1128509 /locus_tag="Acear_1045" /note="GTP-binding protein Der; Reviewed; Region: PRK00093" /db_xref="CDD:178858" misc_feature 1127214..1127690 /locus_tag="Acear_1045" /note="EngA1 subfamily. This CD represents the first GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that...; Region: EngA1; cd01894" /db_xref="CDD:133294" misc_feature 1127223..1127246 /locus_tag="Acear_1045" /note="G1 box; other site" /db_xref="CDD:133294" misc_feature order(1127232..1127234,1127238..1127249,1127553..1127558, 1127562..1127564,1127634..1127642) /locus_tag="Acear_1045" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133294" misc_feature order(1127277..1127297,1127307..1127318) /locus_tag="Acear_1045" /note="Switch I region; other site" /db_xref="CDD:133294" misc_feature 1127307..1127309 /locus_tag="Acear_1045" /note="G2 box; other site" /db_xref="CDD:133294" misc_feature order(1127361..1127378,1127442..1127447) /locus_tag="Acear_1045" /note="Switch II region; other site" /db_xref="CDD:133294" misc_feature 1127364..1127375 /locus_tag="Acear_1045" /note="G3 box; other site" /db_xref="CDD:133294" misc_feature 1127553..1127564 /locus_tag="Acear_1045" /note="G4 box; other site" /db_xref="CDD:133294" misc_feature 1127634..1127642 /locus_tag="Acear_1045" /note="G5 box; other site" /db_xref="CDD:133294" misc_feature 1127721..1128239 /locus_tag="Acear_1045" /note="EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that...; Region: EngA2; cd01895" /db_xref="CDD:133295" misc_feature 1127745..1127768 /locus_tag="Acear_1045" /note="G1 box; other site" /db_xref="CDD:133295" misc_feature order(1127754..1127756,1127760..1127771,1128081..1128086, 1128090..1128092,1128186..1128194) /locus_tag="Acear_1045" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133295" misc_feature order(1127790..1127792,1127799..1127840) /locus_tag="Acear_1045" /note="Switch I region; other site" /db_xref="CDD:133295" misc_feature 1127829..1127831 /locus_tag="Acear_1045" /note="G2 box; other site" /db_xref="CDD:133295" misc_feature 1127886..1127897 /locus_tag="Acear_1045" /note="G3 box; other site" /db_xref="CDD:133295" misc_feature order(1127895..1127900,1127970..1127975) /locus_tag="Acear_1045" /note="Switch II region; other site" /db_xref="CDD:133295" misc_feature 1128081..1128092 /locus_tag="Acear_1045" /note="G4 box; other site" /db_xref="CDD:133295" misc_feature 1128186..1128194 /locus_tag="Acear_1045" /note="G5 box; other site" /db_xref="CDD:133295" gene 1128528..1129148 /locus_tag="Acear_1046" /db_xref="GeneID:9513088" CDS 1128528..1129148 /locus_tag="Acear_1046" /note="COGs: COG0344 membrane protein; InterPro IPR020788:IPR003811; KEGG: hor:Hore_10540 acyl-phosphate glycerol-3-phosphate acyltransferase; PFAM: protein of unknown function DUF205; SPTR: C0GI36 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF205); TIGRFAM: conserved hypothetical integral membrane protein TIGR00023" /codon_start=1 /transl_table=11 /product="acyl-phosphate glycerol-3-phosphate acyltransferase" /protein_id="YP_003827637.1" /db_xref="GI:302391817" /db_xref="GeneID:9513088" /translation="MVSYIFVILISYLLGSIPFGLIITRLVKGVDIREYGSGNIGATN AYRVMGFGMGIMVALCDIGKGYISVFIAQQVFGSQAALILILAGLAAIAGHNWPIFLK FDGGRGVATSVGVLISLLPKAVLIAFFAWLVIVLTTRYVSLGSIIGAVLIPISALIFN SPATYVGLGLAIAIFVVYRHRPNIQRLLAGEENKIGWNMDVEKKEE" misc_feature 1128528..1129118 /locus_tag="Acear_1046" /note="Domain of unknown function (DUF205); Region: DUF205; cl00410" /db_xref="CDD:193806" gene 1129170..1130201 /locus_tag="Acear_1047" /db_xref="GeneID:9513089" CDS 1129170..1130201 /locus_tag="Acear_1047" /EC_number="1.1.1.94" /note="COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterProIPR006168:IPR008927:IPR016040:IPR011128:IPR 006109:IPR013328; KEGG: cth:Cthe_1022 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; PRIAM: Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); SPTR: A3DE75 Glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus" /codon_start=1 /transl_table=11 /product="glycerol 3-phosphate dehydrogenase (NAD(P)+)" /protein_id="YP_003827638.1" /db_xref="GI:302391818" /db_xref="GeneID:9513089" /translation="MDKAAVIGGGSWGSAIAILLANNGYRVSLRDISKEQVTEINDKR TNSNYLPEVKIPEAITATTDLKEAVKKAKLVVVVVPSDAIRKVAEELSGLLAVDTVII SATKGIEEDSYYRMSEVLEDELRSELHDNIAVLSGPSHAEEVSKELPTTVVAASSSRL LAEQIQNIFMSDTFRVYTNPDVVGVELGGALKNIIAIAAGITDGLGYGDNTKAALITR GMAEIKRLGVALGADPMTFAGLSGIGDLVVTCASEHSRNRRLGFKIGQGKSLDQALDE MKMVAEGVRTAKAAYQLAGREGVEVPIIKQAYQVLFEDKSPCKAVNELMMRGKKHEIE EVVQNKDNW" misc_feature 1129224..1130150 /locus_tag="Acear_1047" /note="NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated; Region: gpsA; PRK00094" /db_xref="CDD:178859" misc_feature 1129224..1129658 /locus_tag="Acear_1047" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 1129707..1130141 /locus_tag="Acear_1047" /note="NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; Region: NAD_Gly3P_dh_C; pfam07479" /db_xref="CDD:116100" gene 1130910..1132103 /locus_tag="Acear_1048" /db_xref="GeneID:9513090" CDS 1130910..1132103 /locus_tag="Acear_1048" /note="COGs: COG3835 Sugar diacid utilization regulator; InterPro IPR008599; KEGG: mta:Moth_2351 CdaR family transcriptional regulator; PFAM: sugar diacid recognition domain protein; SPTR: Q2RG03 transcriptional regulator, CdaR family; PFAM: Putative sugar diacid recognition" /codon_start=1 /transl_table=11 /product="CdaR family transcriptional regulator" /protein_id="YP_003827639.1" /db_xref="GI:302391819" /db_xref="GeneID:9513090" /translation="MENIPEINLTSDLAQKIVDRTMEILNYNINIRDYNGRIIASGNQ KRIDTISEMAAQAIKEEEVLTVSKQKAEGDSGMEPGIQLPIYFNGKIMGAVDITGEPK RIEKYGGLVKMTVELMLQQAFYLKKLQLEEQAEEHFIKELLNKNSELSNANIQDRAQV MGYDQRRSYLVAILELTNLWDKLLENVGDTSSMKLQQYKIKIQEGIQELFYNQSSVKV FHLDGERFIILKCEANDDLKNKEDLLELGTNLVGKLDKRFNFDCKLGIGKINQGLRGI RKSFEEGLEALDLGIRFYPTKQVHYSGNLIQERIVENLAPEVRQDLAEIFPLDDQYQQ SLEVYFASNLNVSKTANKLCLHRNSVMYRLNRITEITGFDPRDSEDMVNLKLALLCYK LESSN" misc_feature 1130934..1132076 /locus_tag="Acear_1048" /note="Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms]; Region: CdaR; COG3835" /db_xref="CDD:33627" misc_feature 1130934..1131338 /locus_tag="Acear_1048" /note="Putative sugar diacid recognition; Region: Diacid_rec; pfam05651" /db_xref="CDD:147680" gene 1132761..1134179 /locus_tag="Acear_1049" /db_xref="GeneID:9513091" CDS 1132761..1134179 /locus_tag="Acear_1049" /note="COGs: COG5598 Trimethylamine:corrinoid methyltransferase; InterPro IPR010426; KEGG: dhd:Dhaf_4326 trimethylamine methyltransferase; PFAM: trimethylamine methyltransferase; SPTR: Q24SP7 Putative uncharacterized protein; PFAM: Trimethylamine methyltransferase (MTTB)" /codon_start=1 /transl_table=11 /product="trimethylamine:corrinoid methyltransferase" /protein_id="YP_003827640.1" /db_xref="GI:302391820" /db_xref="GeneID:9513091" /translation="MIKRNTLAGDVLSDNDVKMIHQESLQLLEETGVEIMHEEALDIF EDNGAKVEGKRVYLSAELVEDALDQAPTSFTLHARNSDNDVVIGGGNSVLAPGYGSPY VTSIDESRRDSTFEDYKNFTKLASVSENIDVLGGVLVEPTDLDDKIRHVKMLYAAAKY SDKCLMGSALGAKKARESFKMASILFGEDEIIDDRPITMSLINTMSPLQYDNRMADAL IEHARYNQAAVIASLIMAGSTGPMSIAGTLVLQNVEVLTGIVLAQMVNSGAPVVYGSA STIMDMKAASLAVGSPEYAKFIGATSQLARYYGLPSRAGGSITDSIMVDTQAGYEAMM MFISSINHGINFVLHSAGLLENYMTMSYEKFIIDDEILSMVTNYQAGIEVNEDTVATK VIDDVGPSGHYLQEPHTLQHMEDFREPEISNRAGYTSDNDLIPTVERANEKWKAILAD FESPYLDSVIEQKLTDYIEELK" misc_feature 1132764..1134164 /locus_tag="Acear_1049" /note="Trimethylamine methyltransferase (MTTB); Region: MTTB; cl02383" /db_xref="CDD:174723" gene 1134287..1135852 /locus_tag="Acear_1050" /db_xref="GeneID:9513092" CDS 1134287..1135852 /locus_tag="Acear_1050" /note="COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: dsy:DSY3643 hypothetical protein; PFAM: BCCT transporter; SPTR: C6J4T1 Choline/carnitine/betaine transporter; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport" /codon_start=1 /transl_table=11 /product="choline/carnitine/betaine transporter" /protein_id="YP_003827641.1" /db_xref="GI:302391821" /db_xref="GeneID:9513092" /translation="MAQPEKEVEERVHNSEKKIDPIVFWISAVISGVLIIWGVVDNAG FGDVVNAVFDFLVGNFGWSYLLFVSVVLVATVVVGFTRLGDIKLGKPDDEPEFSTRSW IAMLFSAGMGIGLVFWGVAEPVMHYASPPFGDGETARSAMIAARYSFFHWGLHPWALY SFFGMVLAYFGFRRGLPQLPSSTLYPLVGKEGVKGFWGKAFDILAVFATLFGIATSLG LGAQQINSGLHTLFGIPNNTMMALAIIIVVTIAFVISAVTGLDKGIKILSNINITLGS LLIVLMFIGGPTVFILDYLTQGIGGLFQNFFDMSFFTSPVEQSPWPGWWTIFYWAWWI AWTPFCGGFIGRISKGRTIKEYVLGTLFLPSVIGFVWIATMGGSAIWMEQFGAGGIVG PVQNDVASAFFVSLGKFPLGTFMCMIATVLISTFFITSADSGTFVMGMLTSHGTLEPK TGVKVTWGVLEGFIAAVLLLAGGLSALQTASIAGAFPFMIFMVFTVFAFFKALKKDRD MLAQGEFIGELDW" misc_feature 1134353..1135804 /locus_tag="Acear_1050" /note="BCCT family transporter; Region: BCCT; cl00569" /db_xref="CDD:189118" gene 1136090..1136722 /locus_tag="Acear_1051" /db_xref="GeneID:9513093" CDS 1136090..1136722 /locus_tag="Acear_1051" /EC_number="2.1.1.13" /note="COGs: COG5012 cobalamin binding protein; InterPro IPR006158:IPR003759; KEGG: dth:DICTH_0565 trimethylamine corrinoid protein 2; PFAM: cobalamin B12-binding domain protein; methionine synthase B12-binding module cap domain protein; PRIAM: methionine synthase; SPTR: B5YD39 Trimethylamine corrinoid protein 2; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, methanosarcina family" /codon_start=1 /transl_table=11 /product="methionine synthase" /protein_id="YP_003827642.1" /db_xref="GI:302391822" /db_xref="GeneID:9513093" /translation="MADFEELSNSVIEGNEEKVVELTQELVDDGLEPKEIIRQGLIGG INVVGQRFKDGDMFIPQVMMAAESMKSGMEIVNPLLAEGESSSVGKVVLGTVAGDLHD IGKNLVGMMMESASLEVIDLGVDIDPEEFVEAVKENNPDLLGMSALLTTTMLEMQNTI ELLEEEGLLDGLKIMVGGAPVTPNFADEIGADRWAQDAAAAKEAALELIE" misc_feature 1136105..1136659 /locus_tag="Acear_1051" /note="methyltransferase cognate corrinoid proteins, Methanosarcina family; Region: pyl_corrinoid; TIGR02370" /db_xref="CDD:131423" misc_feature 1136108..1136659 /locus_tag="Acear_1051" /note="B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or...; Region: corrinoid_protein_B12-BD; cd02070" /db_xref="CDD:30208" misc_feature order(1136381..1136401,1136408..1136410,1136519..1136527, 1136531..1136539,1136624..1136626) /locus_tag="Acear_1051" /note="B12 binding site [chemical binding]; other site" /db_xref="CDD:30208" misc_feature 1136390..1136392 /locus_tag="Acear_1051" /note="cobalt ligand [ion binding]; other site" /db_xref="CDD:30208" gene 1136754..1138211 /locus_tag="Acear_1052" /db_xref="GeneID:9513094" CDS 1136754..1138211 /locus_tag="Acear_1052" /note="COGs: COG5598 Trimethylamine:corrinoid methyltransferase; InterPro IPR010426; KEGG: dat:HRM2_44190 MttB9; PFAM: trimethylamine methyltransferase; SPTR: C0GT00 Trimethylamine methyltransferase; PFAM: Trimethylamine methyltransferase (MTTB)" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase" /protein_id="YP_003827643.1" /db_xref="GI:302391823" /db_xref="GeneID:9513094" /translation="MEKMVRSNSVVNKSVNYSTLSEKERERIFYAALEILERTGAVVH DEETLDVLEDAGCWIEDGNHVKIPSGVAQDAVKSAPERVVFYDRNGNPAIHAEGNNSY YGPGPTNNYHKDPWTGERREPCKQDSANVAKVCDYLPNIDYVMDLGTVKDVPAQLSDV HAYHAMVKNTTKPIFHWGFDIEQYQAIIDMAATAVGGLDKLQKKPTLALYAEPTPPLI HSEEGIAKCVHAAKYDLPDIYTPCVMAGGSTPATLAATIATGIADSIVGLVANQHVNE GSPFILGGVYTIMDMKSTIFSYGAPEFLALQAGIAEVAHYMGIPVFGTAGCTDSCTLD GQAAGESAMSILISALAGANVIHDVGYTEYASTGSLYQLVMGDEVIGMVKQYTNGVEV NEDTLALDVIDEVGPGGDYSGHSHTKEHLEDFWTPDLIDRMKREDWEKDGQEMGDKII AKTQRILEEYEPEPLEDEVVEELDRIAEEAEEKYL" misc_feature 1136802..1138124 /locus_tag="Acear_1052" /note="Trimethylamine methyltransferase (MTTB); Region: MTTB; cl02383" /db_xref="CDD:174723" gene 1138233..1138865 /locus_tag="Acear_1053" /db_xref="GeneID:9513095" CDS 1138233..1138865 /locus_tag="Acear_1053" /EC_number="2.1.1.13" /note="COGs: COG5012 cobalamin binding protein; InterPro IPR006158:IPR003759; KEGG: dth:DICTH_0565 trimethylamine corrinoid protein 2; PFAM: cobalamin B12-binding domain protein; methionine synthase B12-binding module cap domain protein; PRIAM: methionine synthase; SPTR: B5YD39 Trimethylamine corrinoid protein 2; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, methanosarcina family; methylmalonyl-CoA mutase C-terminal domain" /codon_start=1 /transl_table=11 /product="methionine synthase" /protein_id="YP_003827644.1" /db_xref="GI:302391824" /db_xref="GeneID:9513095" /translation="MADLEELSNSVIEGNEEKVVELTQELVDDGLEPKEIIRQGLIGG INVVGQRFKDGDMFIPQVMMAAESMKSGMEIVNPLLAEGESSSVGKVVLGTVAGDLHD IGKNLVGMMMESASLEVIDLGVDIDPEEFVEAVKENDPDLLGMSALLTTTMLEMQNTI ELLEEEGLLDGLKIMVGGAPVTPNFADEIGADRWAQDAAAAKEAALELIE" misc_feature 1138248..1138802 /locus_tag="Acear_1053" /note="methyltransferase cognate corrinoid proteins, Methanosarcina family; Region: pyl_corrinoid; TIGR02370" /db_xref="CDD:131423" misc_feature 1138251..1138802 /locus_tag="Acear_1053" /note="B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or...; Region: corrinoid_protein_B12-BD; cd02070" /db_xref="CDD:30208" misc_feature order(1138524..1138544,1138551..1138553,1138662..1138670, 1138674..1138682,1138767..1138769) /locus_tag="Acear_1053" /note="B12 binding site [chemical binding]; other site" /db_xref="CDD:30208" misc_feature 1138533..1138535 /locus_tag="Acear_1053" /note="cobalt ligand [ion binding]; other site" /db_xref="CDD:30208" gene 1138899..1140338 /locus_tag="Acear_1054" /db_xref="GeneID:9513096" CDS 1138899..1140338 /locus_tag="Acear_1054" /note="COGs: COG5598 Trimethylamine:corrinoid methyltransferase; InterPro IPR010426; KEGG: dol:Dole_1111 trimethylamine methyltransferase; PFAM: trimethylamine methyltransferase; SPTR: C0GT01 Trimethylamine methyltransferase; PFAM: Trimethylamine methyltransferase (MTTB)" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase" /protein_id="YP_003827645.1" /db_xref="GI:302391825" /db_xref="GeneID:9513096" /translation="MRSRSNYKVNGSAVQEVLADDQCKQVLSGAMKILKETGVAYQDE EAVEILKEAGCYVENGRVYIPVKLVEKALRTVPSQVTLYNSRTKEAELYLEGGNAYFG TGSEAPCFLDPYEEAIVDTTQETVEMATKLADALPRIDFVMSMGNIQDKSESVRDRYQ FLAQLANTSKPIVTTAVDKQGCADIVEMSETVAGGAEELKRRPFMALCVKPDSPLKPA AVDTEKLMYASEKSLPVTYTPYLSAGANVPATLAGAVAVGLAEVLAALVLNQQIEEGA PFIMGGYFTIVDTENEICSDGAPESSLMQAALSDIAHYLDIPMFGACGGTDSKTVDEQ AAIEDALSILTSAKSGANLNHGIGSIEYGNATALENLIICDEMIGFARRSIKGIEVND ETLALDIIHEVGPGGHFITQQHTMDNFQKETWYPDLFQRKNYVDWEDEGKKTLTDRAH EKALDILESHEPDGLDDEMIEKLEAIVEE" misc_feature 1138917..1140329 /locus_tag="Acear_1054" /note="Trimethylamine methyltransferase (MTTB); Region: MTTB; cl02383" /db_xref="CDD:174723" gene 1140458..1142428 /locus_tag="Acear_1055" /db_xref="GeneID:9513097" CDS 1140458..1142428 /locus_tag="Acear_1055" /note="COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit; InterPro IPR008040:IPR002821; KEGG: dhd:Dhaf_1734 hydantoinase/oxoprolinase; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; SPTR: B8FPW6 Hydantoinase/oxoprolinase; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region" /codon_start=1 /transl_table=11 /product="Hydantoinase/oxoprolinase" /protein_id="YP_003827646.1" /db_xref="GI:302391826" /db_xref="GeneID:9513097" /translation="MSVTLGIDTGGTYTDGVVMDLDEGKIFAESKALTTRRDLSIGIN ECIDNLEEIDFSDIKMVSLSTTLATNATVEGQGCEVGLILIGFELEDNLPTEHYVSIQ GGHDIKGNRKERLDVKEVREVVNSLQSKVDAFAVSGYLSVRNPEHEKKVKDIIQDLTD YPVVCGHELTSSLGISERTATAVLNARLIPIIADLINAVKGMMEEHNIDAPLMIVKGD GSLVSEEVAREKPIETILSGPASSIIGSTYLTDLEDGIVVDMGGTTTDVALLQDGTPS LTEKGAMVGGWLTRVKAVDMATIGIGGDSYIRVSKDHLLQVGPQRVYPLCWAVAQHRY LLDQLLEIDAEEYFPVNSQPTDILFFIKEPLHIDLTKTEEQILEIIREKPQSLYHIGK KLDKDPNLLRWNRLVNIGSVHRASLTPTDLLHVTGRMEEWNVEASKVGVKIGARRYGV EVENFIKDVEEEIYYKIALVITEMLLKDKKVEFDWKQDSLTEFLLEAIFRENKEQDEL IEFSTTINLPIIAIGAPVEAYFPEIADRCNATLEIPEHSEVANAVGTVTGKVIEQVEI LVKPGAESGYLVHAPGEKKMFKELEEAVEFAKDVGEKYVRERAKRSKVTDLKVNIEHE DVYSSFSQLEDKDDLYLESKIKVVAMGRPELN" misc_feature 1140458..1142335 /locus_tag="Acear_1055" /note="N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]; Region: HyuA; COG0145" /db_xref="CDD:30494" misc_feature 1140470..1140934 /locus_tag="Acear_1055" /note="Hydantoinase/oxoprolinase N-terminal region; Region: Hydant_A_N; pfam05378" /db_xref="CDD:147519" misc_feature 1140989..>1141435 /locus_tag="Acear_1055" /note="Hydantoinase/oxoprolinase; Region: Hydantoinase_A; cl00668" /db_xref="CDD:163895" misc_feature <1142003..1142149 /locus_tag="Acear_1055" /note="Hydantoinase/oxoprolinase; Region: Hydantoinase_A; cl00668" /db_xref="CDD:163895" gene 1142460..1143257 /locus_tag="Acear_1056" /db_xref="GeneID:9513098" CDS 1142460..1143257 /locus_tag="Acear_1056" /EC_number="2.1.1.13" /note="COGs: COG1410 methionine synthase I cobalamin-binding domain; InterPro IPR000489:IPR011005:IPR002856; KEGG: mta:Moth_2115 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; PFAM: dihydropteroate synthase DHPS; PRIAM: methionine synthase; SPTR: Q2RGN2 5-methyltetrahydrofolate--homocysteine S-methyltransferase; PFAM: Pterin binding enzyme" /codon_start=1 /transl_table=11 /product="methionine synthase" /protein_id="YP_003827647.1" /db_xref="GI:302391827" /db_xref="GeneID:9513098" /translation="MIIIGELINTSREEVEPAVKDRDKEFIQELAKKQEEAGVDYVDV NCGTLIREEPEALEWLVETVQEAVDVPLCIDSPDPKAIKQGLEAHEGKALVNSITAED ERYDEVLPLIKEYDANIVALVMNDNGMPDDATDRIEVATELVDNLLEDGIPAEDIFVD PIIQPIGTDSEMGEHILNAVEEISSKYEDIHITCGLSNISHGLPQRQLLNQAYLVLAM SRGMDSAILDPLDEKIMSLAQASDTLLGKDQYCSDYIKASKSGDLTV" misc_feature 1142460..1143143 /locus_tag="Acear_1056" /note="Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a...; Region: Pterin_binding; cl00219" /db_xref="CDD:197403" misc_feature order(1142484..1142486,1142682..1142684,1142745..1142747, 1142751..1142753,1142823..1142825,1142937..1142939, 1143042..1143044,1143054..1143056,1143135..1143137, 1143141..1143143) /locus_tag="Acear_1056" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29544" misc_feature 1142487..1143065 /locus_tag="Acear_1056" /note="Pterin binding enzyme; Region: Pterin_bind; pfam00809" /db_xref="CDD:189727" misc_feature order(1142970..1142972,1142982..1142987,1143093..1143095, 1143105..1143107,1143117..1143119) /locus_tag="Acear_1056" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29544" misc_feature 1143048..1143056 /locus_tag="Acear_1056" /note="inhibitor binding site; inhibition site" /db_xref="CDD:29544" gene 1143527..1143901 /locus_tag="Acear_1057" /db_xref="GeneID:9513099" CDS 1143527..1143901 /locus_tag="Acear_1057" /note="KEGG: cbl:CLK_0695 GrdX protein; SPTR: A8SM60 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="GrdX protein" /protein_id="YP_003827648.1" /db_xref="GI:302391828" /db_xref="GeneID:9513099" /translation="MKYFILSNNPIVRENFEQVYFVKVSVKELLIKVRNLVHKGHELI THPLPASMKIMSSPFRSIVLSKDKQQRVDAFQVEVIEESIFKLRYHIQQQSIDNDNDD DYQMLDYRLLRSALESSNKIAL" gene 1143924..1145210 /locus_tag="Acear_1058" /db_xref="GeneID:9513100" CDS 1143924..1145210 /locus_tag="Acear_1058" /note="InterPro IPR015417; KEGG: shi:Shel_21510 glycine/sarcosine/betaine reductase component B alpha/beta subunit; PFAM: glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; SPTR: C7N8C6 glycine/sarcosine/betaine reductase component B alpha/beta subunit; PFAM: glycine/sarcosine/betaine reductase component B subunits" /codon_start=1 /transl_table=11 /product="glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits" /protein_id="YP_003827649.1" /db_xref="GI:302391829" /db_xref="GeneID:9513100" /translation="MKLELEKIEIEDIQLGNETYVEDGVLTVNEEELVSLLKEDNRIE GVSLDVAKPGEKVRIIPVKDVIQPRFKVEGEGQGYPGVTDKMAGVGDGVTKVLDGAAV VTIGEIVGIQEGLIDMWGEGADYTPFSKTNNLVVDITPVDDLSGHDHEEAVRLAGLKA GKYLGAAGEKVEPDKTEVYEMNSMAENIEDYPDLPRVAYIEMMISQGLLHDTYIYGVD SKEILPTLIHPNEILDGAMVSGNCVAACDKITTYQHQNNSVVLDLYDKHGEEINFMGA ILTPELVTLEGKTRSCKYATNIAKMLGAEGVVISEEGYGNPDADLVQNCKFLEDDGIK TALITDECAGRDGMSQSLADANSAAKAVVSTGNVSHPVELAPAEKVIGNEEVIANLSG GSEESLGEDGSIVCELNAVIGSTSEIGYHSVTAKSY" misc_feature 1143957..1145207 /locus_tag="Acear_1058" /note="Glycine/sarcosine/betaine reductase component B subunits; Region: Gly_reductase; pfam09338" /db_xref="CDD:150114" gene 1145232..1146539 /locus_tag="Acear_1059" /db_xref="GeneID:9513101" CDS 1145232..1146539 /locus_tag="Acear_1059" /note="Contains selenocysteine; InterPro IPR010186:IPR010187; KEGG: chy:CHY_2393 glycine reductase, selenoprotein B; PFAM: Selenoprotein B glycine/betaine/sarcosine/D-proline reductase; SPTR: Q3A9J4 glycine reductase complex component B subunit gamma; TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; glycine reductase, selenoprotein B; manually curated; PFAM: glycine/sarcosine/betaine reductase selenoprotein B (GRDB); TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; glycine reductase, selenoprotein B" /codon_start=1 /transl_except=(pos:1146279..1146281,aa:Sec) /transl_table=11 /product="selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family" /protein_id="YP_003827650.1" /db_xref="GI:302391830" /db_xref="GeneID:9513101" /translation="MSQKFKVVYYLNQFFGQVGGEDEADIEPFTEEGPVGPAQGFEGM LEDGEVAGTVICGDNYFNENSEAVDTVLEMINEYDPDVVVAGPAFNAGRYGMACAGVC KAVAEELGISVVTGMYEENPGLDVCKEIAYVVETADSAAGMRDALPTMANIVDKLVSG KPLGPPEEEGYIPQGRRKTVFSDKRGSLRAVEMLMARLNGEEFETELSMPEFDDVDPA DPVEDITEATVALVTSGGIVPGDNPDQIESASATKFGCYSIEGVNDLKEDTDYITIHG GYDPVYANEDCNRVVPLDVLRDLEEEGAVGNIHDKYYVTTGTGTAVANAEEFGEEIGE ELKNDGVDAVILTSTUGTCTRCGATMVKEIERYGIPIVHMASIISISQSVGANRIVPS IAIPHPVGNPDLGLKEEKELRKSMVEKALEALTTEIEDQTIFE" misc_feature 1145247..1146536 /locus_tag="Acear_1059" /note="Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); Region: GRDB; cl06409" /db_xref="CDD:157190" misc_feature 1145247..1146536 /locus_tag="Acear_1059" /note="selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; Region: various_sel_PB; TIGR01918" /db_xref="CDD:130973" gene 1146553..1147020 /locus_tag="Acear_1060" /db_xref="GeneID:9513102" CDS 1146553..1147020 /locus_tag="Acear_1060" /EC_number="1.21.4.4" /note="Contains selenocysteine; InterPro IPR006812:IPR016160; KEGG: nth:Nther_0473 glycine/sarcosine/betaine reductase complex protein A; PFAM: glycine reductase complex selenoprotein A; SPTR: B2A5X6 Betaine reductase; manually curated; PFAM: glycine reductase complex selenoprotein A" /codon_start=1 /transl_except=(pos:1146676..1146678,aa:Sec) /transl_table=11 /product="glycine reductase complex selenoprotein A" /protein_id="YP_003827651.1" /db_xref="GI:302391831" /db_xref="GeneID:9513102" /translation="MLEGKKVAIIGDRDGIPAPAIQECIETTGAEVVFGSTECFVUTA AGAMDLENQKRIQELAEEHGEENLVVILGGAEAEASGLAAETVTNGDPTFAGPLAGVQ LGLRVYHVVEPEIKDEIDEDVYEDQISMMEMVLEVDDIVEEVKKYREEYCQFI" misc_feature 1146553..1147008 /locus_tag="Acear_1060" /note="Glycine reductase complex selenoprotein A; Region: GRDA; cl04705" /db_xref="CDD:186632" gene 1147107..1148300 /locus_tag="Acear_1061" /db_xref="GeneID:9513103" CDS 1147107..1148300 /locus_tag="Acear_1061" /note="COGs: COG0492 Thioredoxin reductase; InterProIPR005982:IPR012336:IPR013027:IPR013766:IPR 000103; KEGG: nth:Nther_0470 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain; SPTR: B2A5X3 Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Thioredoxin; Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase" /codon_start=1 /transl_table=11 /product="thioredoxin reductase" /protein_id="YP_003827652.1" /db_xref="GI:302391832" /db_xref="GeneID:9513103" /translation="MSKEYDVIIVGGGPAGLSAGMYASRSKLDTLLLETGDVGGQPKS YEEMENYPGVLDASAPELVENFKEHAQEFGTEIKEGEVKEIDADGFVKTVTTKEGVEY KAKSIILATGAEPRRLDVEGEEEFKGKGVSYCATCDADFFVDLEVAVVGNGNSAIEEA LYLTKFASKVTVIVIHEEGTMDADKIYQERAYENDKIEFVWNSTVDRIEGDGLVDKAV LKNIKTGDLTDFECDGIFIFIGRVPSTDFVEDTVELTDNGYIKVDDTLETSKPGVFAA GDVREKYLRQVVTAAADGATTATAAGGYIEEEEYWQENVLEADEDVLVAFWSPTNEES MDMTNKLENMDLDAKLVKIDTYKNMRISNRYEVTEIPTLLKLQDGEVVEKLIQPTVDE LEEII" misc_feature 1147107..>1147205 /locus_tag="Acear_1061" /note="NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis]; Region: Gid; cl11520" /db_xref="CDD:187089" misc_feature 1147119..1147970 /locus_tag="Acear_1061" /note="thioredoxin-disulfide reductase; Region: TRX_reduct; TIGR01292" /db_xref="CDD:162288" misc_feature 1147332..>1147442 /locus_tag="Acear_1061" /note="NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis]; Region: Gid; cl11520" /db_xref="CDD:187089" misc_feature 1147545..1147769 /locus_tag="Acear_1061" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 1148043..1148297 /locus_tag="Acear_1061" /note="TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox...; Region: TRX_family; cd02947" /db_xref="CDD:48496" misc_feature order(1148097..1148099,1148106..1148108) /locus_tag="Acear_1061" /note="catalytic residues [active]" /db_xref="CDD:48496" gene 1148337..1148654 /locus_tag="Acear_1062" /db_xref="GeneID:9513104" CDS 1148337..1148654 /locus_tag="Acear_1062" /note="COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR017936:IPR012336:IPR013766:IPR012335; KEGG: nth:Nther_0471 thioredoxin domain; PFAM: Thioredoxin domain; SPTR: B2A5X4 Thioredoxin domain; PFAM: Thioredoxin" /codon_start=1 /transl_table=11 /product="Thioredoxin domain protein" /protein_id="YP_003827653.1" /db_xref="GI:302391833" /db_xref="GeneID:9513104" /translation="MIEVDKENYEEEVLEVEGPVMVDYWGEGCDHCLELMPGVEDLAE KYGDDMKFCKLNIKGNRRLAMSQQVMGLPSMVFYVDGEKVEHLSGDDLTIEEIEEEIK KHI" misc_feature 1148403..1148603 /locus_tag="Acear_1062" /note="TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox...; Region: TRX_family; cd02947" /db_xref="CDD:48496" misc_feature order(1148421..1148423,1148430..1148432) /locus_tag="Acear_1062" /note="catalytic residues [active]" /db_xref="CDD:48496" gene 1149097..1150635 /locus_tag="Acear_1063" /db_xref="GeneID:9513105" CDS 1149097..1150635 /locus_tag="Acear_1063" /note="InterPro IPR016039:IPR013751; KEGG: nth:Nther_0475 betaine reductase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; SPTR: B2A5X8 Betaine reductase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III" /codon_start=1 /transl_table=11 /product="3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III" /protein_id="YP_003827654.1" /db_xref="GI:302391834" /db_xref="GeneID:9513105" /translation="MNEAVLKGNSYVLVHAANTLLEHGSTQTSERAQNPDSEYLKQAP EFLRSYEEVVGYGPNQSYIGNMSIKDLEDIERPWYENNVDDASRFSDWGEIMPEDEFY GVMKMADSFDLVQLSEDFAKDVKDKLADHSLLEDNLDQIEGTAVDSIQEMVDEHTAEP LYLDGELIGCVKQAHDTDVNLNAHTMLENTVVKASGILSMLHLGKQEGIDLAEIDYVI EVSEEACGDINQRGGGNFAKSIAEMAGCKQATGSDTRSFCAGPAHGLIHAAGLVKSGM FDNVVVVAGGSTAKLGMNGKDHVKNEMPILEDCLGGFAVLVSEDDGKSPVIRTDAVGR HTVDTGSSPQAVISSLVTEPLDNIDLGITDIDKYSVEMQNPDITEPAGAGNVPESNYK MIAALGVKRGDLEKKELPNFVDEHGMPGFAPTQGHIPSGVPFIGHARREMLAGEMERS MIIGKGSLFLGRMTNLFDGVSFIMEANEGQDSNETGVSEDEIKGIVAKAMRNLSDSLL ADEE" misc_feature 1149607..1150494 /locus_tag="Acear_1063" /note="'initiating' condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by...; Region: init_cond_enzymes; cd00827" /db_xref="CDD:29414" misc_feature order(1149760..1149762,1149766..1149768,1149808..1149810, 1149817..1149819,1149841..1149858,1149883..1149885, 1149892..1149897,1149904..1149909,1149964..1149966, 1150078..1150089,1150468..1150470) /locus_tag="Acear_1063" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29414" misc_feature order(1149868..1149870,1150375..1150377) /locus_tag="Acear_1063" /note="active site" /db_xref="CDD:29414" gene 1150650..1151810 /locus_tag="Acear_1064" /db_xref="GeneID:9513106" CDS 1150650..1151810 /locus_tag="Acear_1064" /note="COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; InterPro IPR012116:IPR003664; KEGG: nth:Nther_0476 glycine reductase; PFAM: fatty acid synthesis plsX protein; SPTR: B2A5X9 glycine reductase; PFAM: Fatty acid synthesis protein" /codon_start=1 /transl_table=11 /product="fatty acid synthesis plsX protein" /protein_id="YP_003827655.1" /db_xref="GI:302391835" /db_xref="GeneID:9513106" /translation="MANKEAKKKVANVFNQVADAIETGQFGAKTKVGITTLGSEHGVE EIVKGAEMAHNKHQDLEVKLIGPDVDTELSVIYETDCEETAHDKMEELLQAGKIDACV TNHFNFPIGVSTVGRVVTPGLGREMLLATSTGSSATNRITAMVKNAIYGITAAKALGN ENPSVGILNVDGARQVEQALKELKDNGYEINFSETVRADGGCVMRGNDLLQGSADIMV TDTLTGNLLMKVFGAFTTGGSYESLGYGYGPGVGEDYDQIINIISRASGAPVIAGAIR YAADAAQGELTKVAQQEFKAAKDAGLEEIIEDIESSNSAAEEEVSAPPAKTVDEEISG IDILTLDDAKAALWKEGIYAETGMGCTGPVVMVANEDEEEAMEILKENGFIT" misc_feature 1150740..1151747 /locus_tag="Acear_1064" /note="Phosphate acetyl/butaryl transferase; Region: PTA_PTB; cl00390" /db_xref="CDD:193798" gene 1152041..1153519 /locus_tag="Acear_1065" /db_xref="GeneID:9513107" CDS 1152041..1153519 /locus_tag="Acear_1065" /note="InterPro IPR014201; KEGG: hor:Hore_10560 sporulation stage IV protein A; PFAM: sporulation stage IV protein A; SPTR: B8CWZ2 sporulation stage IV protein A; TIGRFAM: stage IV sporulation protein A; PFAM: Stage IV sporulation protein A (spore_IV_A); TIGRFAM: stage IV sporulation protein A" /codon_start=1 /transl_table=11 /product="stage IV sporulation protein A" /protein_id="YP_003827656.1" /db_xref="GI:302391836" /db_xref="GeneID:9513107" /translation="MEEYNIYQDIADRTGGDIYIGVVGPVRTGKSTFIKRFMDLLVLP NIEDEYEKERTQDELPQSGAGRTIMTTEPKFVPNEGIELGLDDKLNFRVRLVDCVGYQ VDGALGYEEEDGPRMVITPWYEEAIPFQEAAEVGTKKVIDEHSTIGLVVTTDGSITEL PRESYIEAEERVIAELEEIGKPYLITLNTTSPNSQRTQQLKGELEEKYNKPVVPVDCE NLTEDDITYLLQETLYEFPVREINIDLPLWIDQLNSDHWLSEELSANINESMEDVIRL RDIEEGLNNLADYEYTKEIILENMDLGTGSAEINIAMQDQLFYNVIKEETGLEIEGDH HLFNLIQELSEAKDKYDKVAQALAEVEEKGYGIVQPELEDLVFDEPELIKQGGQFGVK LNASAPSIHMIRADINTEVSPVVGTEKRCEELIDFMQEEFEENPEAIWDTDFLGRSLH DLVKDGIQNKLYRMPENAQNKLQDTLQKVVNEGSGGLICIIL" misc_feature 1152041..1153516 /locus_tag="Acear_1065" /note="Stage IV sporulation protein A (spore_IV_A); Region: Spore_IV_A; cl09772" /db_xref="CDD:158689" gene 1153681..1153980 /locus_tag="Acear_1066" /db_xref="GeneID:9513108" CDS 1153681..1153980 /locus_tag="Acear_1066" /note="COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119:IPR020816:IPR010992; KEGG: hor:Hore_10570 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: B8CWZ3 Histone family protein DNA-binding protein; PFAM: Bacterial DNA-binding protein" /codon_start=1 /transl_table=11 /product="bacterial nucleoid protein Hbs" /protein_id="YP_003827657.1" /db_xref="GI:302391837" /db_xref="GeneID:9513108" /translation="MTKTELVDRIADKTGLTKKDTKETVDAFTEVVTETLQEEANKDE DERDKVQLIGFGSFEVRDRSARKGRNPQTGEEIEIPARKVPAFKAGKGLKEAVDQ" misc_feature 1153684..1153968 /locus_tag="Acear_1066" /note="Integration host factor (IHF) and HU are small heterodimeric members of the DNABII protein family that bind and bend DNA, functioning as architectural factors in many cellular processes including transcription, site-specific recombination, and higher-...; Region: HU_IHF; cd00591" /db_xref="CDD:29683" misc_feature order(1153684..1153689,1153696..1153698,1153705..1153707, 1153717..1153719,1153759..1153761,1153768..1153773, 1153780..1153785,1153795..1153797,1153822..1153833, 1153840..1153845,1153858..1153860,1153924..1153929, 1153939..1153941,1153945..1153947,1153966..1153968) /locus_tag="Acear_1066" /note="IHF dimer interface [polypeptide binding]; other site" /db_xref="CDD:29683" misc_feature order(1153684..1153692,1153756..1153758,1153825..1153827, 1153831..1153833,1153837..1153842,1153849..1153851, 1153861..1153863,1153867..1153872,1153876..1153878, 1153885..1153896,1153924..1153926,1153936..1153938, 1153942..1153944,1153951..1153953) /locus_tag="Acear_1066" /note="IHF - DNA interface [nucleotide binding]; other site" /db_xref="CDD:29683" gene 1154112..1154987 /locus_tag="Acear_1067" /db_xref="GeneID:9513109" CDS 1154112..1154987 /locus_tag="Acear_1067" /EC_number="2.6.1.42" /note="COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005785:IPR018300:IPR001544; KEGG: hor:Hore_10810 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; PRIAM: Branched-chain-amino-acid transaminase; SPTR: B8CX16 Branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; D-amino acid aminotransferase" /codon_start=1 /transl_table=11 /product="branched chain amino acid aminotransferase apoenzyme" /protein_id="YP_003827658.1" /db_xref="GI:302391838" /db_xref="GeneID:9513109" /translation="MSQKVYLNGELVEKDEAKVSVWDHGFLYGDGIFEGIRAYNGRIF RFKQHIDRLYESAKAIMLDIPLTKEEMEEAVIETIQANELEDCYIRLVVSRGVGDLGL NPTSCPESNVIIIASDIELYPEKFYKEGLEVVTVPTRRNIPEALNPRIKSLNYLNNIL AKLEANRAGVLEAVMLNNEGYVAECTGDNIFIIKDDTLITPPVSAGALKGIKRDVVLE IAPELGLEVREELFTRHALYTADECFLSGTAAEVVPVVKIDDRDIADGTPGDYTWDLI DKFRERANSEGEHIY" misc_feature 1154118..1154972 /locus_tag="Acear_1067" /note="branched-chain amino acid aminotransferase; Provisional; Region: PRK12479" /db_xref="CDD:183549" misc_feature 1154127..1154948 /locus_tag="Acear_1067" /note="D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids. It plays a major role in the synthesis of bacterial cell wall components like D-alanine and D-...; Region: D-AAT_like; cd01558" /db_xref="CDD:29569" misc_feature order(1154163..1154168,1154172..1154201,1154208..1154210, 1154379..1154381,1154385..1154387,1154391..1154393, 1154442..1154444,1154454..1154456,1154565..1154579, 1154583..1154588,1154595..1154600,1154610..1154612, 1154670..1154672) /locus_tag="Acear_1067" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:29569" misc_feature order(1154193..1154195,1154208..1154210,1154265..1154267, 1154562..1154564,1154574..1154576,1154661..1154663, 1154742..1154747,1154853..1154855) /locus_tag="Acear_1067" /note="substrate-cofactor binding pocket; other site" /db_xref="CDD:29569" misc_feature order(1154208..1154210,1154265..1154267,1154562..1154564, 1154745..1154747,1154853..1154855) /locus_tag="Acear_1067" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:29569" misc_feature 1154562..1154564 /locus_tag="Acear_1067" /note="catalytic residue [active]" /db_xref="CDD:29569" gene 1155230..1155685 /locus_tag="Acear_1068" /db_xref="GeneID:9513110" CDS 1155230..1155685 /locus_tag="Acear_1068" /note="COGs: COG4492 hypothetical protein; InterPro IPR008310:IPR002912; KEGG: dhd:Dhaf_3377 amino acid-binding ACT domain protein; PFAM: amino acid-binding ACT domain protein; SPTR: A1HTV0 Amino acid-binding ACT domain protein" /codon_start=1 /transl_table=11 /product="amino acid-binding ACT domain protein" /protein_id="YP_003827659.1" /db_xref="GI:302391839" /db_xref="GeneID:9513110" /translation="MRESSNEYYVVHKDILPTAIVKTVKAKQLLKSGGVDNVSEAVER IGLSRSAYYKYKDYAFPFLEDTQQKVITLSLLLKHESGVLSQVINEIAKVKGNILTIN QGIPLQGVANATITIETIEMISDVDGLMEDLDGLSGIQKVEIIGRNFKY" misc_feature 1155236..1155673 /locus_tag="Acear_1068" /note="hypothetical protein; Provisional; Region: PRK04435" /db_xref="CDD:179848" misc_feature 1155440..1155667 /locus_tag="Acear_1068" /note="C-terminal ACT domain of a small (; 147 a.a.) putative phenylalanine biosynthetic pathway protein described in Bacillus subtilis (BS) PheB (PheB-BS) and related domains; Region: ACT_PheB-BS; cd04888" /db_xref="CDD:153160" gene 1155702..1156991 /locus_tag="Acear_1069" /db_xref="GeneID:9513111" CDS 1155702..1156991 /locus_tag="Acear_1069" /EC_number="1.1.1.3" /note="COGs: COG0460 Homoserine dehydrogenase; InterProIPR016204:IPR019811:IPR016040:IPR005106:IPR 001342:IPR002912; KEGG: dae:Dtox_2114 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; PRIAM: Homoserine dehydrogenase; SPTR: C1TG46 Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain" /codon_start=1 /transl_table=11 /product="homoserine dehydrogenase" /protein_id="YP_003827660.1" /db_xref="GI:302391840" /db_xref="GeneID:9513111" /translation="MGKSVVKVAILGLGTVGSGVAKLLLENNQNINQKIDNEVKLVKV LDKDLTREREVDIPAEMMTDNPEDILSNPEIDVVVETIGGVGPAKELVTEALEVKKNV VTANKEMVAKYGSELLELSDENGVDFYFEASVGGGIPIIRSLKESLTANRIQEVMGIV NGTTNYILTKMIQEGAKFEDVLAEAQQKGYAEPDPTADIEGYDAAYKLSILSAIAFGS PVDVDDIHLEGISDIKQEDITYAKELGYVIKLLAIGKEADGEIEVRVHPTMIPNEHPL AAVNNVFNAVFVKGHAVGELMYYGRGAGSMPTGSAIVADVMDIARNINYRANNRISCS CYEDKDIKPMFDITAKYYIRLEVIDEPGVLASVSSIFGKNNVSIESVIQKGKIDKTVP LVLVTHQVTEGDIQTALKEIKELDEVKELSSLIRVED" misc_feature 1155717..1156985 /locus_tag="Acear_1069" /note="homoserine dehydrogenase; Provisional; Region: PRK06349" /db_xref="CDD:180538" misc_feature 1155735..1156094 /locus_tag="Acear_1069" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature 1156116..1156652 /locus_tag="Acear_1069" /note="Homoserine dehydrogenase; Region: Homoserine_dh; pfam00742" /db_xref="CDD:189696" misc_feature 1156752..1156985 /locus_tag="Acear_1069" /note="ACT_HSDH_Hom CD includes the C-terminal ACT domain of the NAD(P)H-dependent, homoserine dehydrogenase (HSDH) and related domains; Region: ACT_HSDH-Hom; cd04881" /db_xref="CDD:153153" gene 1157015..1158256 /locus_tag="Acear_1070" /db_xref="GeneID:9513112" CDS 1157015..1158256 /locus_tag="Acear_1070" /EC_number="2.7.2.4" /note="COGs: COG0527 Aspartokinase; InterProIPR005260:IPR001341:IPR018042:IPR001048:IPR 002912; KEGG: drm:Dred_1167 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; PRIAM: Aspartate kinase; SPTR: A4J3P8 Aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase" /codon_start=1 /transl_table=11 /product="aspartate kinase" /protein_id="YP_003827661.1" /db_xref="GI:302391841" /db_xref="GeneID:9513112" /translation="MGLIVQKYGGTSVANPDRIKKVAERIVKRKHEGDQVVAVVSALG NTTDELIELSREITDNPPKREYDMLVSTGEQVSVALLAMAINELGEEVISLTGSQVGI ITDDLHSKAQILKIDSSRLEKELSKDKIVVVAGFQGVTINNDITTLGRGGSDTTAVAL ATKLDAEVCEIYTDVDGIYTADPRTVEAASKLKGISYDEMLELANLGAQVLQPRSVEF AKNYGIKLAVRSSFNHKPGTYVKEVGKLEKDRVVTGVACSTDDIKISLIGVPDRPGIA YQIFEALAEASINVDMIIQNVHRGEVNDITFTIDDENLNEAKALLDKLQNELAIENIV YDSEVAKVSIVGAGMVTNPGVAAEMFEALASQDINIEMISTSEIKVSCLINKSDADKA VQAIHDSFDLGNVEEASDGNV" misc_feature 1157015..1158223 /locus_tag="Acear_1070" /note="aspartate kinase; Reviewed; Region: PRK06635" /db_xref="CDD:180641" misc_feature 1157021..1157737 /locus_tag="Acear_1070" /note="AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive...; Region: AAK_AKii-LysC-BS; cd04261" /db_xref="CDD:58627" misc_feature order(1157033..1157035,1157039..1157047,1157534..1157539, 1157546..1157551) /locus_tag="Acear_1070" /note="putative nucleotide binding site [chemical binding]; other site" /db_xref="CDD:58627" misc_feature order(1157033..1157035,1157153..1157155,1157234..1157236) /locus_tag="Acear_1070" /note="putative catalytic residues [active]" /db_xref="CDD:58627" misc_feature order(1157135..1157137,1157153..1157155,1157474..1157476, 1157558..1157560) /locus_tag="Acear_1070" /note="putative Mg ion binding site [ion binding]; other site" /db_xref="CDD:58627" misc_feature order(1157135..1157140,1157153..1157155,1157234..1157236) /locus_tag="Acear_1070" /note="putative aspartate binding site [chemical binding]; other site" /db_xref="CDD:58627" misc_feature 1157801..1158019 /locus_tag="Acear_1070" /note="ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related proteins; Region: ACT_AKii-LysC-BS-like_1; cd04913" /db_xref="CDD:153185" misc_feature 1157906..1157911 /locus_tag="Acear_1070" /note="putative allosteric regulatory site; other site" /db_xref="CDD:153185" misc_feature 1158032..1158220 /locus_tag="Acear_1070" /note="ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains; Region: ACT_AKii-LysC-BS-like_2; cd04936" /db_xref="CDD:153208" misc_feature 1158032..1158034 /locus_tag="Acear_1070" /note="putative allosteric regulatory residue; other site" /db_xref="CDD:153208" gene 1158249..1159148 /locus_tag="Acear_1071" /db_xref="GeneID:9513113" CDS 1158249..1159148 /locus_tag="Acear_1071" /EC_number="2.7.1.39" /note="COGs: COG0083 Homoserine kinase; InterProIPR000870:IPR006203:IPR020568:IPR006204:IPR 013750:IPR014721; KEGG: hmo:HM1_1938 homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; SPTR: B0TFR6 Homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase" /codon_start=1 /transl_table=11 /product="homoserine kinase" /protein_id="YP_003827662.1" /db_xref="GI:302391842" /db_xref="GeneID:9513113" /translation="MYRVKVPATTANLGPGFDILGMALDLYNIIEVKETDRGLNIDIE GLGAKELPTDKSNLVYQTMDYLFDKADYRPAGLDIKLINQIPIARGLGSSATIIVGGL VLANTLAGTPFSNDQLLNFAAEIEGHPDNVAPALLGGVVISVITDQEEIIYKKIKAPE LKTVVGIPDFKLSTTEAREVLPAQVTFNDAVFNCSRVGLLVSAFMTEDYDLLATCFED RLHQSYRQDLVPGMGEVIKEAKDDGALAIALSGAGPSIVALTLENEVEVGETIVRVFA QHGIKANYKVAEPNSTGVIVENL" misc_feature 1158249..1159139 /locus_tag="Acear_1071" /note="homoserine kinase; Provisional; Region: PRK01212" /db_xref="CDD:179248" misc_feature 1158480..1158665 /locus_tag="Acear_1071" /note="GHMP kinases N terminal domain; Region: GHMP_kinases_N; cl08256" /db_xref="CDD:195670" gene 1159334..1161022 /locus_tag="Acear_1072" /db_xref="GeneID:9513114" CDS 1159334..1161022 /locus_tag="Acear_1072" /note="COGs: COG0646 methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726:IPR000489:IPR011005; KEGG: drm:Dred_2207 homocysteine S-methyltransferase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; SPTR: A4J6L9 methionine synthase (B12-dependent); PFAM: Pterin binding enzyme; Homocysteine S-methyltransferase" /codon_start=1 /transl_table=11 /product="homocysteine S-methyltransferase" /protein_id="YP_003827663.1" /db_xref="GI:302391843" /db_xref="GeneID:9513114" /translation="MKSDFLTELESEVLLFDGAMGTQLQQAGLGTDTAPEAWNLENPK AIKKIHKSYLAAGSRVIQTNTFGANCIKLGKYDLEDKVTEINQAAVEIAKEVQKDGYV AGSIGPLGKLFAPMGTLTFREGVDVFAEQIRALVNAGVDVISFETMNDLQELRAAVVA AKEVTSEVPIIAQMTFDENLRSLSGTNPQIAATVLDSLGADIIGANCSLGPQGLLEVL KALNRTTDKPIIIQPNAGLPEIVDGETVYQQSPEEMAEYIKRFVQEGANIIGGCCGTS PEHIKAFAEKLSRLEPKRSAADKKFRLASGMELVELSEDSRSLMIGEQINTDSDKRLT EEIKDQVEAGAQVLNINVDGTDIDGVEIQQVVERVQKTSRASMAIDTADIEVLEAGLE AFVGKALINSVTGREEDLNRILPLAKKYGAGLICSTVDDDGIPGTAEKRVEIAKRIKQ QTGEYGIAPEDLLINPVAVTVSSQQEAAIETLQAIKLIKEHLDLKTVLQVDNISDKLP KRLLLDRTFISMALGYGLDAYIIDPLNEEIRETILAAEVLVNRDRDAERYITEF" misc_feature 1159340..1160200 /locus_tag="Acear_1072" /note="Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism]; Region: MetH; COG0646" /db_xref="CDD:30991" misc_feature 1159340..1160197 /locus_tag="Acear_1072" /note="Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) [Amino acid transport and metabolism]; Region: MHT1; cl14105" /db_xref="CDD:187229" misc_feature 1160288..1160971 /locus_tag="Acear_1072" /note="Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a...; Region: Pterin_binding; cl00219" /db_xref="CDD:197403" misc_feature 1160288..1160806 /locus_tag="Acear_1072" /note="Pterin binding enzyme; Region: Pterin_bind; pfam00809" /db_xref="CDD:189727" misc_feature order(1160309..1160311,1160471..1160473,1160534..1160536, 1160540..1160542,1160612..1160614,1160726..1160728, 1160828..1160830,1160840..1160842,1160921..1160923, 1160927..1160929) /locus_tag="Acear_1072" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29544" misc_feature order(1160771..1160776,1160879..1160881,1160891..1160893, 1160903..1160905,1160951..1160956) /locus_tag="Acear_1072" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29544" misc_feature 1160834..1160842 /locus_tag="Acear_1072" /note="inhibitor binding site; inhibition site" /db_xref="CDD:29544" gene 1161108..1162514 /locus_tag="Acear_1073" /db_xref="GeneID:9513115" CDS 1161108..1162514 /locus_tag="Acear_1073" /note="COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterProIPR005761:IPR019793:IPR013221:IPR004101:IPR 000713; KEGG: hor:Hore_00700 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--lysine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: B8D077 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--lysine ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramyl-tripeptide synthetase" /protein_id="YP_003827664.1" /db_xref="GI:302391844" /db_xref="GeneID:9513115" /translation="MKEYNNISGVTCDSRKVGAGDAFVAIEGFEDDGNKYIDDAVKQG AEVVYTEREIDHREVQVVKVDNARKILAQLANQVYNSPSESLELVGVTGTNGKTTTTH LIEKLFSGYGFTTGLIGTVKIKLGDKVEEADLTTPGADQICNYMDKMVDNNVDIAAME VSSHGIKLHRVEGLDFDIVVYTNLTKDHLDLHEDFEDYLATKKELFKQAGEESTALIN LDDEYADRIMSGLSAEVITYGFSDRADIQVTEASYDAGGSRFRIESSLASPQQFEIEL NLLGRHNIYNALAAAAVGLIYGLSVEEIKAQLKEFNPFFRRLEVIYDDKFTIIDDCAH NPGNYRAVFETIKELDYDRLYIINAIRGNRGITVSRENAEIISKYIPDLNLSKLYITS CEKLANKYDVVSDEEREVFLSTLCDSGLEFEYFDYLHPCLNQTLKQVKSNDLIILLGA HAMDQAADLILNLINNNN" misc_feature 1161126..1162469 /locus_tag="Acear_1073" /note="UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]; Region: MurF; COG0770" /db_xref="CDD:31113" misc_feature 1161126..1161344 /locus_tag="Acear_1073" /note="Mur ligase family, catalytic domain; Region: Mur_ligase; pfam01225" /db_xref="CDD:144716" misc_feature 1161411..1161989 /locus_tag="Acear_1073" /note="Mur ligase middle domain; Region: Mur_ligase_M; pfam08245" /db_xref="CDD:191979" misc_feature 1162053..>1162244 /locus_tag="Acear_1073" /note="Mur ligase family, glutamate ligase domain; Region: Mur_ligase_C; pfam02875" /db_xref="CDD:190458" gene 1162674..1163060 /locus_tag="Acear_1074" /db_xref="GeneID:9513116" CDS 1162674..1163060 /locus_tag="Acear_1074" /note="InterPro IPR005149:IPR011991:IPR003432; KEGG: amt:Amet_2654 PadR-like family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: A6TRI8 transcriptional regulator, PadR-like family; PFAM: transcriptional regulator PadR-like family" /codon_start=1 /transl_table=11 /product="PadR family transcriptional regulator" /protein_id="YP_003827665.1" /db_xref="GI:302391845" /db_xref="GeneID:9513116" /translation="MSNYKGKLNRQFPAKISTTAFTSIYILHLLKNNDHLYGQKILDM INEQMDARWQPSRGMVYPLLREMEDQGYVESWWSEPDKRSIRYYRLTEKGAEHLEKMK IKYKSSFREARKIIDTAIDEIYQGNI" misc_feature 1162740..1162976 /locus_tag="Acear_1074" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene 1163206..1163958 /locus_tag="Acear_1075" /db_xref="GeneID:9513117" CDS 1163206..1163958 /locus_tag="Acear_1075" /note="COGs: COG2323 membrane protein; InterPro IPR007353; KEGG: drm:Dred_1469 hypothetical protein; PFAM: protein of unknown function DUF421; SPTR: C0GJP2 Putative uncharacterized protein; PFAM: protein of unknown function (DUF421)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827666.1" /db_xref="GI:302391846" /db_xref="GeneID:9513117" /translation="MLDNLIDNGRIGTMFGRTVFIYIFTLLAVRLMGKREVGELTPFD LVVSLMIAEVAAVVIEEHQAPMIHAIIPIITLSGLQILISFISLKSETLRRFLNGSPS ILIKNGEIIEEEMKSSRYTIHDLLSQLRENGIFNIKDVEFAILETSGDLTVIPKSQKR AVTPEDLNIDTEYEGIPTILINDGKINHSNLEKIGMSKEWLLNELKEHRVENIEDVLA AILDTTGELYVTTKNADKLSERIMDTIPDKFQ" misc_feature 1163236..1163910 /locus_tag="Acear_1075" /note="Protein of unknown function (DUF421); Region: DUF421; cl00990" /db_xref="CDD:193999" gene 1164039..1164239 /locus_tag="Acear_1076" /db_xref="GeneID:9513118" CDS 1164039..1164239 /locus_tag="Acear_1076" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827667.1" /db_xref="GI:302391847" /db_xref="GeneID:9513118" /translation="MEEDNIPPLDELDQETIETVENYNPDDAELGEDISAEIIEEAQD ISPDDYDIHDELSESIKEKKRD" gene 1164251..1164412 /locus_tag="Acear_1077" /pseudo /db_xref="GeneID:9513119" gene 1164541..1165128 /locus_tag="Acear_1078" /db_xref="GeneID:9513120" CDS 1164541..1165128 /locus_tag="Acear_1078" /EC_number="3.2.2.21" /note="COGs: COG2094 3-methyladenine DNA glycosylase; InterPro IPR003180:IPR011034; KEGG: nth:Nther_0710 DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); PRIAM: DNA-3-methyladenine glycosylase II; SPTR: B2A7A8 Putative 3-methyladenine DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg)" /codon_start=1 /transl_table=11 /product="DNA-3-methyladenine glycosylase" /protein_id="YP_003827668.1" /db_xref="GI:302391848" /db_xref="GeneID:9513120" /translation="MNLKLDFYKQDAVTLAKNLLGNLLIRRIKDKEIRVKIVETEAYV GPEDKACHAYQNKKTKRTKVMFKRGGHSYVYLIYGIHHCFNVVTASKGKPEAVLVRAV EPIEGWDLIRQNRQIKSNKDEDLTNGPGKLCQALEIDKSLNGHDLVKGEKICIADNNQ SYNIAADKRINIDYAEEYKDKLWRFYIKDNSFVSK" misc_feature 1164559..1165122 /locus_tag="Acear_1078" /note="Alkyladenine DNA glycosylase catalyzes the first step in base excision repair; Region: AAG; cd00540" /db_xref="CDD:187726" misc_feature order(1164661..1164663,1164667..1164669,1164694..1164696, 1164757..1164759,1164772..1164774,1164793..1164795, 1164832..1164834,1164838..1164840,1165048..1165050) /locus_tag="Acear_1078" /note="active site" /db_xref="CDD:187726" misc_feature order(1164667..1164669,1164688..1164690,1164694..1164696, 1164709..1164711,1164715..1164717,1164721..1164723, 1164763..1164765,1164772..1164774,1164781..1164783, 1164793..1164795,1164832..1164834,1164838..1164840, 1164871..1164873,1164922..1164933,1164958..1164960, 1165048..1165053) /locus_tag="Acear_1078" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:187726" gene 1165150..1165662 /locus_tag="Acear_1079" /db_xref="GeneID:9513121" CDS 1165150..1165662 /locus_tag="Acear_1079" /note="COGs: COG1827 small molecule binding protein (contains 3H domain); InterPro IPR004173:IPR013196:IPR011991; KEGG: cbl:CLK_3150 transcriptional regulator; PFAM: 3H domain protein; Helix-turn-helix type 11 domain protein; SPTR: B1L1L4 transcriptional regulator, biotin repressor family; PFAM: HTH domain; 3H domain" /codon_start=1 /transl_table=11 /product="3H domain protein" /protein_id="YP_003827669.1" /db_xref="GI:302391849" /db_xref="GeneID:9513121" /translation="MSAEERREEILNLLLTKEKPITGSDLAERFDVSRQAIVQDVALL RAKGEEILATSQGYVVPQQNSKMVVRTIACKHNGDEIRGELETVIKYGGRVKDVIVEH PIYGELKGFLMVQSKEDLNTFMKKYKQDSVKPLLTLTEGVHLHTIEALNEEVLNLIEE KLEEKGYLLE" misc_feature 1165198..1165323 /locus_tag="Acear_1079" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 1165363..1165617 /locus_tag="Acear_1079" /note="3H domain; Region: 3H; pfam02829" /db_xref="CDD:145798" gene 1165797..1166393 /locus_tag="Acear_1080" /pseudo /db_xref="GeneID:9513122" gene 1166390..1167625 /locus_tag="Acear_1081" /pseudo /db_xref="GeneID:9513123" gene 1167606..1168475 /locus_tag="Acear_1082" /db_xref="GeneID:9513124" CDS 1167606..1168475 /locus_tag="Acear_1082" /EC_number="2.4.2.19" /note="COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR004393:IPR002638:IPR013785; KEGG: pth:PTH_0226 nicotinate-nucleotide pyrophosphorylase; PFAM: quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: A5D5U1 Nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: quinolinate phosphoribosyl transferase, C-terminal domain; quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase" /codon_start=1 /transl_table=11 /product="nicotinate-nucleotide pyrophosphorylase (carboxylating)" /protein_id="YP_003827670.1" /db_xref="GI:302391850" /db_xref="GeneID:9513124" /translation="MELNLNRQQILRMIDDALAEDIGTGDLTTEAVVDSTQQVQGELI AKEEGVIAGLAVAGLIFERLGAKIDYQQQIEEGVRVRPQTVIATISGLAAPILTGERV ALNFLQRLSGIATKTAQYAELVADYDVRIVDTRKTTPGLRMLEKYAVRVGGGFNHRCG LYDAVLIKDNHIQVVGSITEAVEQAKEGVPHTVKIEVEVETLAEVKEALASGVDIIML DNMPPELMEKAVGLIAGQTVTEASGGITAETIKEVAQAGVDIISLGTLTHTISALDIS LRLGSDNNDRPKG" misc_feature 1167639..1168439 /locus_tag="Acear_1082" /note="Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-...; Region: QPRTase; cd01572" /db_xref="CDD:29619" misc_feature 1167645..1168442 /locus_tag="Acear_1082" /note="nicotinate-nucleotide pyrophosphorylase; Region: nadC; TIGR00078" /db_xref="CDD:161695" misc_feature order(1167687..1167692,1167903..1167908,1167918..1167920, 1168008..1168010,1168014..1168016,1168026..1168031, 1168086..1168091,1168101..1168103,1168107..1168109, 1168113..1168118,1168125..1168127,1168158..1168160, 1168407..1168409) /locus_tag="Acear_1082" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29619" misc_feature order(1168005..1168013,1168074..1168079,1168260..1168262, 1168329..1168334,1168389..1168391,1168395..1168400, 1168407..1168409) /locus_tag="Acear_1082" /note="active site" /db_xref="CDD:29619" gene 1168456..1169472 /locus_tag="Acear_1083" /db_xref="GeneID:9513125" CDS 1168456..1169472 /locus_tag="Acear_1083" /note="COGs: COG3641 membrane protein toxin regulator; InterPro IPR003352; KEGG: nth:Nther_2149 PTS system, EIIc component; PFAM: phosphotransferase system EIIC; SPTR: C0GCA2 phosphotransferase system EIIC" /codon_start=1 /transl_table=11 /product="phosphotransferase system EIIC" /protein_id="YP_003827671.1" /db_xref="GI:302391851" /db_xref="GeneID:9513125" /translation="MIGQKVKRFLAEKNIELSLERYGIQALGAMARGLFASLIVGLIL KVLGQRLGIPLLVEFSKTAMDMMGPAIGVAVAYGLEAPPLVIFTSVVTGAAGAELGGP VGAFISAVIGAEFGKVISKETKLDIVITPSVVIITGLLMAKFVGPGIDAFMKGLGQVI MRATELQPIPMGIIVSVLMGMALTLPISSAAIGLMLSLSGLAAGAATVGCSAQMIGFA VISWRENGFGGLISQGLGTSMLQMPNIVRNPYIWIPPTLSGAILGPIATTVIPMENIP IGSGMGTAGLVGQFGTIEAMGMEALGSIIILHFILPAILSLVIAELMRKWGLIGAEDL LLEL" misc_feature 1168480..1169469 /locus_tag="Acear_1083" /note="Phosphotransferase system, EIIC; Region: PTS_EIIC; cl00557" /db_xref="CDD:186079" gene 1169685..1171304 /locus_tag="Acear_1084" /db_xref="GeneID:9513126" CDS 1169685..1171304 /locus_tag="Acear_1084" /note="COGs: COG0058 Glucan phosphorylase; InterPro IPR011834:IPR000811; KEGG: hmo:HM1_2568 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; SPTR: B0TAZ4 phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases" /codon_start=1 /transl_table=11 /product="alpha-glucan phosphorylase" /protein_id="YP_003827672.1" /db_xref="GI:302391852" /db_xref="GeneID:9513126" /translation="MKDKSNVAYFCMEYGLNEELPIYSGGLGVLAGDYLKAADDLDLP LVGIGILWDQGYTHQYIGEDGRPYDTFPTFDFDEYLQDTGVTVTVTVDGEEVNCKVKL LERYDNAPLYLLDTNISDSKHSWITSKLYDGDEYDRIAQEIVLGIGGVRALRELNINV DKYHFNEGHAVFAGVELIREKMEAGMSFSEAKEATREEIVFTTHTPVEAGNEAHDHGL LRRLGVYNSLDYEMMESIGGNPFNMTVAGLKLSSVTNGVSKLHEQTTKEMWEDVEDKA PITGVTNGVHANTWQDERMKDAYEAGEDLWQPHSELKQELVDYIAGNHYYGTQLDTNT LIIGFARRAAEYKRWQLIFENEEKIAPLLEERKLQLVFSGKAHPDDELGKDIVQSLVQ IEQRYKGSVVFLENYNLGVAQKMIKGCDVWLNNPRRPLEASGTSGMKAAMNGVLNLSV VDGWVGEGVEHNVSGWLIDELLPDISQLNDDQQDAEALYKIIYDEILPTYYEDRDKWK KMMRASIDMSQEKFSAQRMIKDYYTRIYNPK" misc_feature 1169691..1171298 /locus_tag="Acear_1084" /note="Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate...; Region: Glycosyltransferase_GTB_type; cl10013" /db_xref="CDD:186885" misc_feature 1169703..1171298 /locus_tag="Acear_1084" /note="alpha-glucan phosphorylases; Region: more_P_ylases; TIGR02094" /db_xref="CDD:162699" gene 1171533..1172216 /locus_tag="Acear_1085" /db_xref="GeneID:9513127" CDS 1171533..1172216 /locus_tag="Acear_1085" /note="COGs: COG3330 conserved hypothetical protein; KEGG: hor:Hore_16010 hypothetical protein; SPTR: B8CYI1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827673.1" /db_xref="GI:302391853" /db_xref="GeneID:9513127" /translation="MSESKEKKLSKLQKESIQGDSELSSFSQQNEEKNQQHNLQQVFD DEYELPESYDLNRIVLQVRNPESIYIYWEYTFDKLQDTAIQAGYEDVKKAPLILRVYC CGENNTEAEYYDINITLDHNDWYLYDLNPDHDYEVELGILNDKFYPILKSNQVTTPSN SISDKLDEEWMTVTEKLEEIYTLAGIDELESYSSENLMQEMTKEIKLSHLKTGYSSLE VLKNSDEVR" misc_feature 1171602..1172072 /locus_tag="Acear_1085" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3330" /db_xref="CDD:33139" gene 1172243..1173844 /locus_tag="Acear_1086" /db_xref="GeneID:9513128" CDS 1172243..1173844 /locus_tag="Acear_1086" /note="COGs: COG1543 conserved hypothetical protein; InterPro IPR011330:IPR004300:IPR015293; KEGG: bhy:BHWA1_02300 glycosyl hydrolase family 57; PFAM: Domain of unknown function DUF1957; glycoside hydrolase family 57; SPTR: C0QWV3 glycosyl hydrolase family 57; PFAM: Domain of unknown function (DUF1957); glycosyl hydrolase family 57" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827674.1" /db_xref="GI:302391854" /db_xref="GeneID:9513128" /translation="MSKNKGYLSLVLHAHLPFVRHPEHDNFLEERWLYEAITETYIPL IKQFEELHQNEVDYKLTVSLSPTLISMLTDELLQQRYIDYLDRLIGLTNSEVDRTSDQ PQMNQTARMYLDKFKEAKEIFIGWYNKDLIAAFKEFQELGYLELIVCGATHGYLPLME EYPEAVRAQIELAVNTYKQYFDRKPKGIWLPECGYYPGLDKILADYNLRFFILDTHGL LYATPRPKYGAFAPVYTESGVAAFGRDNQSSEKVWSAEEGYPGDHNYREYYRDIGFDL SFDYLQPYIQQEVRVNTGLKYYKITGEDSNLQEKELYNYQKALDRAKIHAEDFIQQQI EQIEKLNDLMDRKPMITAPYDAELFGHWWYEGPNFLNYLIRKLDNDQEVIELISPVEY LKEYPENQVCEPPMCSWGANGYNDVWVEDSNAWIYRHLHQAADKMIELATDYEEPDSL TERALNQAARELLLAQSSDWAFIMKTDTMVEYAVKRTKSHIHRFFNLYNQIKMDDLDV DWLEELEYKDNIFSEIDYRVYSEEY" misc_feature 1172255..1173832 /locus_tag="Acear_1086" /note="Uncharacterized conserved protein [Function unknown]; Region: COG1543" /db_xref="CDD:31732" misc_feature 1173524..1173829 /locus_tag="Acear_1086" /note="Domain of unknown function (DUF1957); Region: DUF1957; pfam09210" /db_xref="CDD:192230" gene 1173879..1175132 /locus_tag="Acear_1087" /db_xref="GeneID:9513129" CDS 1173879..1175132 /locus_tag="Acear_1087" /EC_number="2.7.7.27" /note="COGs: COG0448 ADP-glucose pyrophosphorylase; InterProIPR011831:IPR005836:IPR011004:IPR005835:IPR 001451; KEGG: rca:Rcas_0946 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; SPTR: A7NHW3 Glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase, GlgD subunit" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate adenylyltransferase" /protein_id="YP_003827675.1" /db_xref="GI:302391855" /db_xref="GeneID:9513129" /translation="METLAMVLAGGKGSRLDILSADRAKPSVPFAGKFRIIDFALSNC VNSGIYDVGILTQYLPRSLNRHIGIGKPWDLDRQFGGATLLQPYTGKKGGWYQGTAHA IYQNINYIKDIDPEYVIILSSDHVYKMDYSKMVNYHKEKGADLTIAVKPVSMKEASQF GILTTDEEMQINDFQEKPDNPSSNLASMGIYVFTKDVLVGKLEEFCNQENSDFGHHII PQMIDPDDVFAYEFNGYWQDVGTLKSYWETNLELTDLVPEMNLYDDNWKLLTRSEEQP PVKFGPKGQASKSLISNGAIINGKVENSVISPGVFIEENVVIKDSIICNDSKIKQGTV INKSIIDKEVIIGSECQIGCSGEKKANFEQPEILHSGLNVIGKGAEVPAETCIEKNCR IFPWIEEDDFRKKAIQSGSTVRPQT" misc_feature 1173879..1175042 /locus_tag="Acear_1087" /note="glucose-1-phosphate adenylyltransferase; Provisional; Region: glgC; PRK05293" /db_xref="CDD:179997" misc_feature 1173891..1174595 /locus_tag="Acear_1087" /note="ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch; Region: ADP_Glucose_PP; cd02508" /db_xref="CDD:133002" misc_feature order(1173900..1173902,1173906..1173911,1174167..1174169, 1174173..1174175,1174245..1174250,1174512..1174514, 1174518..1174523) /locus_tag="Acear_1087" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:133002" misc_feature order(1174059..1174061,1174068..1174070,1174125..1174127, 1174134..1174136,1174143..1174145,1174194..1174196, 1174200..1174202,1174212..1174217) /locus_tag="Acear_1087" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:133002" misc_feature 1174707..1175021 /locus_tag="Acear_1087" /note="Glucose-1-phosphate adenylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Glucose-1-phosphate adenylyltransferase is also known as ADP-glucose synthase or ADP-glucose pyrophosphorylase. It catalyzes the first committed and rate-...; Region: LbH_G1P_AT_C; cd04651" /db_xref="CDD:100056" misc_feature order(1174707..1174709,1174713..1174751) /locus_tag="Acear_1087" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:100056" misc_feature order(1174740..1174742,1174752..1174757,1174785..1174787, 1174791..1174793,1174800..1174802,1174899..1174901, 1175010..1175012) /locus_tag="Acear_1087" /note="N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:100056" misc_feature order(1174899..1174904,1175007..1175009) /locus_tag="Acear_1087" /note="sulfate 1 binding site; other site" /db_xref="CDD:100056" gene 1175155..1176600 /locus_tag="Acear_1088" /db_xref="GeneID:9513130" CDS 1175155..1176600 /locus_tag="Acear_1088" /EC_number="2.4.1.21" /note="COGs: COG0297 Glycogen synthase; InterPro IPR011835:IPR013534:IPR001296; KEGG: hor:Hore_06940 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; PRIAM: Starch synthase; SPTR: B8CVY2 Glycogen/starch synthase, ADP-glucose type; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain; glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type" /codon_start=1 /transl_table=11 /product="glycogen synthase (ADP-glucose)" /protein_id="YP_003827676.1" /db_xref="GI:302391856" /db_xref="GeneID:9513130" /translation="MDNRLKVLFVSPEVDPFIKTGGLADVAGSLPQAIKELGVDIRVV LPEYSQVPDEYLNQLEHLLHYRTKVGWRDEYVGINNLDNKGVPTYFIDNKHYFDRTAV YGHDDKQIQFAYFCRAVLEMLPKIGFQPDIIHCNDWQTGPISIMLKENYKLYDFYQDI KTVYTIHNLRYQGKFDREILEDVLALDSAHWESGVVKHDNNVNYMKMGINMSDTVTTV SNTYAEEIKTPYFGEGLDYVIRMNADDVYGIINGIDYKKYNPAVDEEIYAKYDLENLE GKAENKKKLQKDMGLSAKDVPVIGMVSRLVEQKGLDLIGQVIDELMNEEIQFVILGTG EERYEEIFKAAASRYPDKIAANIKYDSTLAKKIYAGSDLFLMPSKYEPCGIGQLISLR YGTIPVVRETGGLNDTIQSYNEETGSGNGFSFTDYNADDMLYTIRRAVKFYNQPSEWQ GLVKNAMKSDFSWHNSAEEYLELYQNTIAQV" misc_feature 1175167..1176594 /locus_tag="Acear_1088" /note="glycogen synthase; Provisional; Region: glgA; PRK00654" /db_xref="CDD:179083" misc_feature 1175170..1176582 /locus_tag="Acear_1088" /note="This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family...; Region: GT1_Glycogen_synthase_DULL1_like; cd03791" /db_xref="CDD:99965" misc_feature order(1175209..1175211,1175218..1175220,1176058..1176066, 1176226..1176231,1176244..1176246,1176295..1176297, 1176310..1176312) /locus_tag="Acear_1088" /note="ADP-binding pocket [chemical binding]; other site" /db_xref="CDD:99965" misc_feature order(1175824..1175826,1176355..1176357,1176370..1176375, 1176379..1176381,1176454..1176456) /locus_tag="Acear_1088" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99965" gene 1176959..1178296 /locus_tag="Acear_1089" /db_xref="GeneID:9513131" CDS 1176959..1178296 /locus_tag="Acear_1089" /note="InterPro IPR003615:IPR002711; KEGG: ate:Athe_2426 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: B9MNG3 HNH endonuclease; PFAM: HNH endonuclease" /codon_start=1 /transl_table=11 /product="HNH endonuclease" /protein_id="YP_003827677.1" /db_xref="GI:302391857" /db_xref="GeneID:9513131" /translation="MVFVLNKDKTPLNPCHNGKAKWLLDNNYAVVHKIQPFTIRLKKK VTNPNLKDYTLKIDPGSKTTGLAINNGSQVAFLANLHHRADTIKQNLQTRREHRRFRR SQLKYREKRFDNRKRGDNWLPPSVDSIVNNIKTWVQRLKKLCPISKVVVEMVRFDTQK MQNPEIEGIEYQQGTLQGYNVREYLLYKHNHTCQYCGGESGDPVLEVEHKIPSSRGGT DSIKNLTLSCKTCNQDKDNRTLKEWLQDLKEQDFRKKLPKVRYKNVKQILESKVDISL KDAGRVNSYRYKLLDQLKSICSNIETSTGAKTKYNRNQVAELEKTHYFDALCVGTAKQ EYSFQKGFKVLSIKATGRGTRQRTLLDKYGFPRAYRSRNKYVDNFKTGDLVKAVIPKG KNKGVYFARVSTRKSGYFRLDCFNGSKVDGVNSKYLNLLQRGAGYSYSFEDIA" misc_feature <1177376..1177789 /locus_tag="Acear_1089" /note="CRISPR-associated protein Cas9/Csn1, subtype II/NMEMI; Region: cas_Csn1; TIGR01865" /db_xref="CDD:162567" misc_feature 1177511..1177663 /locus_tag="Acear_1089" /note="HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins...; Region: HNHc; cd00085" /db_xref="CDD:28969" misc_feature order(1177574..1177576,1177580..1177588,1177592..1177594, 1177625..1177630,1177640..1177645,1177652..1177654) /locus_tag="Acear_1089" /note="active site" /db_xref="CDD:28969" gene 1178688..1179182 /locus_tag="Acear_1090" /db_xref="GeneID:9513132" CDS 1178688..1179182 /locus_tag="Acear_1090" /note="COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit; InterPro IPR002758; KEGG: mgm:Mmc1_2216 membrane bound protein complex subunit MbxA; PFAM: cation antiporter; SPTR: C0GEX8 Cation antiporter; PFAM: Na+/H+ ion antiporter subunit" /codon_start=1 /transl_table=11 /product="multisubunit sodium/proton antiporter, MrpE subunit (2.A.63.1)" /protein_id="YP_003827678.1" /db_xref="GI:302391858" /db_xref="GeneID:9513132" /translation="MNDKNQAINFWIMNFLLFLFWFLLSGSFNFFSIVIGLILSYLIF NLSIRFFGNELEFWYRPRQLLLLTNFFVSLISEIIKANLNMAWIIINPKLPVSPGIVK FKTGLKSDLAKVILANTITLTPGTLTIDINGDEFIVHIIAKESIEGLLSNELEKLLSE IEGN" misc_feature 1178787..1179113 /locus_tag="Acear_1090" /note="Na+/H+ ion antiporter subunit; Region: MNHE; cl00807" /db_xref="CDD:186198" gene 1179184..1179447 /locus_tag="Acear_1091" /db_xref="GeneID:9513133" CDS 1179184..1179447 /locus_tag="Acear_1091" /note="InterPro IPR007208; KEGG: amt:Amet_4158 multiple resistance and pH regulation protein F; PFAM: multiple resistance and pH regulation protein F; SPTR: C0GEX7 Multiple resistance and pH regulation protein F; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF)" /codon_start=1 /transl_table=11 /product="multiple resistance and pH regulation protein F" /protein_id="YP_003827679.1" /db_xref="GI:302391859" /db_xref="GeneID:9513133" /translation="MGLVFKLAIGTIIFTSFLCLYRGILGPSAVDRIIVVNTINTKVV VILGLSSCVFDNFLYLDVAIVYAMMSFIFTIAVAKYKLKGNLS" misc_feature 1179184..1179435 /locus_tag="Acear_1091" /note="Multiple resistance and pH regulation protein F (MrpF / PhaF); Region: MrpF_PhaF; cl09154" /db_xref="CDD:186841" gene 1179460..1179807 /locus_tag="Acear_1092" /db_xref="GeneID:9513134" CDS 1179460..1179807 /locus_tag="Acear_1092" /note="COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit; InterPro IPR005133; KEGG: tpd:Teth39_0434 monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; SPTR: C0GEX6 Monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit" /codon_start=1 /transl_table=11 /product="monovalent cation/proton antiporter, MnhG/PhaG subunit" /protein_id="YP_003827680.1" /db_xref="GI:302391860" /db_xref="GeneID:9513134" /translation="MSFIIIGLIFTGVFFFIVGTIGLIRLPDTYSRIHAPTKCDTLGL GLIISGMILYNGLSIHSVKMLLILIFLWITGPAAASVISKAAIENEVPFSEGSFCYYQ NDELKKEVVKDGQ" misc_feature 1179460..1179750 /locus_tag="Acear_1092" /note="Na+/H+ antiporter subunit; Region: PhaG_MnhG_YufB; cl00583" /db_xref="CDD:197412" gene 1179797..1180036 /locus_tag="Acear_1093" /db_xref="GeneID:9513135" CDS 1179797..1180036 /locus_tag="Acear_1093" /note="KEGG: nth:Nther_0504 multicomponent Na+:H+ antiporter subunit B; SPTR: B2A689 Putative multicomponent Na+:H+ antiporter subunit B" /codon_start=1 /transl_table=11 /product="multicomponent Na+:H+ antiporter subunit B" /protein_id="YP_003827681.1" /db_xref="GI:302391861" /db_xref="GeneID:9513135" /translation="MVNNITLLLLLLLAVSALIATQIKDLLAAIVVFGVYSLIMSIIW QQMKAPDLAITEAVVGIVISIMFVVLISRTERWEE" misc_feature 1179797..>1180033 /locus_tag="Acear_1093" /note="Domain related to MnhB subunit of Na+/H+ antiporter; Region: MnhB; cl00676" /db_xref="CDD:186140" gene 1180024..1180131 /locus_tag="Acear_1094" /db_xref="GeneID:9513136" CDS 1180024..1180131 /locus_tag="Acear_1094" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827682.1" /db_xref="GI:302391862" /db_xref="GeneID:9513136" /translation="MGRVKKLISIIFILRFVVVNDMFTFDSGDIIEEMG" gene 1180152..1180541 /locus_tag="Acear_1095" /db_xref="GeneID:9513137" CDS 1180152..1180541 /locus_tag="Acear_1095" /note="InterPro IPR007182; KEGG: amt:Amet_4154 Na+/H+ antiporter MnhB subunit-related protein; PFAM: Na+/H+ antiporter MnhB subunit-related protein; SPTR: C0GEX3 Na+/H+ antiporter MnhB subunit-related protein; PFAM: Domain related to MnhB subunit of Na+/H+ antiporter" /codon_start=1 /transl_table=11 /product="Na+/H+ antiporter MnhB subunit-related protein" /protein_id="YP_003827683.1" /db_xref="GI:302391863" /db_xref="GeneID:9513137" /translation="MQHLVVKKITEILLPFLQIYGFYVLLNGHHSPGGGFAGGAILGA SLIIYSLVFGIKEAKDKIPHVLLTIINSIGVLIYILLGIAGVFLGGNILGNGALSLEL GLFLESAIGLVVAGVMTSFFYKLVEEE" misc_feature 1180152..1180529 /locus_tag="Acear_1095" /note="Domain related to MnhB subunit of Na+/H+ antiporter; Region: MnhB; cl00676" /db_xref="CDD:186140" gene 1180544..1180915 /locus_tag="Acear_1096" /db_xref="GeneID:9513138" CDS 1180544..1180915 /locus_tag="Acear_1096" /note="COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: nth:Nther_0507 NADH-ubiquinone oxidoreductase chain 4L; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: C0GEX2 NADH-ubiquinone oxidoreductase chain 4L; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L" /codon_start=1 /transl_table=11 /product="multisubunit sodium/proton antiporter, MrpC subunit (2.A.63.1)" /protein_id="YP_003827684.1" /db_xref="GI:302391864" /db_xref="GeneID:9513138" /translation="MDLIVKLIQNIHYFISLFLFLLGFYTMLAKSNLVKKMIGLNIMD TSIFLFLVSTGYIKGGKVPLIHNADKVLRVNPLPHALVLTGIVVSFSISVFGYALIIK IYSHYGTINTKEISKMRGNDK" misc_feature 1180580..1180894 /locus_tag="Acear_1096" /note="NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; Region: Oxidored_q2; cl00492" /db_xref="CDD:186032" gene 1180912..1182405 /locus_tag="Acear_1097" /db_xref="GeneID:9513139" CDS 1180912..1182405 /locus_tag="Acear_1097" /note="COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750:IPR003918; KEGG: nth:Nther_0508 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: B2A693 Proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N" /codon_start=1 /transl_table=11 /product="multisubunit sodium/proton antiporter, MrpD subunit (2.A.63.1)" /protein_id="YP_003827685.1" /db_xref="GI:302391865" /db_xref="GeneID:9513139" /translation="MNISEHLPISIVLFQLIVGVMLPLFHKWKESFTSIIVAFAAIIN VLISSASILQILKSGTRTYQLGGWASHLGIEVVFDNITALTSLLISVIFMIIIFYAIK GIEEEIDSKQVGHYFSLFFFLNAAMYGMAMAFDIFNLYVFMEISLIASVGIVTIKDTP EAIQGGFKYLILNAIGSSTILLGIGMIYQTTGYLNFIWIAQEINSAWANSPQVITAVI GLFIVGFSLKSALFPLHIWLPDAHSAAPTPSSAMLSGLIIKVYCISLIRIIYIVLSPQ VLEAIPLGSILRILAAISILFGSFFAILQTDIKRMLAYSSVSQIGYIVLGFSLFTQSG LQGSLLHVINHAFMKSGLFLAAGNIIKKTGIKKINRLSGLGRKMPVTFTAFSLGALAM IGIPPLNGFFSKWYLALGSLEANMPIYLVVIIVSSLLNATYYLPVIVKGFFYESQENL DGFKEVKPSLYIPPILLGSSCLVLGLGIKWPMKIIDQVAKTLLTMGG" misc_feature 1180924..1182300 /locus_tag="Acear_1097" /note="putative monovalent cation/H+ antiporter subunit D; Reviewed; Region: PRK08376" /db_xref="CDD:181405" misc_feature 1181314..1182132 /locus_tag="Acear_1097" /note="NADH-Ubiquinone/plastoquinone (complex I), various chains; Region: Oxidored_q1; cl14187" /db_xref="CDD:187256" gene 1182410..1183897 /locus_tag="Acear_1098" /db_xref="GeneID:9513140" CDS 1182410..1183897 /locus_tag="Acear_1098" /note="COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750:IPR003916; KEGG: ctc:CTC01338 sodium/proton antiporter ShaA; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: C0GJ36 NADH dehydrogenase (Quinone); PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus" /codon_start=1 /transl_table=11 /product="NADH/Ubiquinone/plastoquinone (complex I)" /protein_id="YP_003827686.1" /db_xref="GI:302391866" /db_xref="GeneID:9513140" /translation="MPTFLKPIAPWLVILFPILTLPLKFFLKRIKKTREILALIVPVI TTLFVSSYYSLIVNGEVLTNTVFKMNNILNIYFRVDAASFLFAIVSSTLWIFTIIYSF GYMKEYQNKDRYYSFLILALSVTMGVAFSGNLLTFYMFYELLTLITYPLVIHVQTEEA MDAGKQYLTYSLSGGALILLGIMFVAFLNEGVVLNFIPGGLISKSLLETGRSLEITLL VFLAGFSVKAAVMPLHRWLPAAMVAPTPISALFHAVAVVNSGVFGIIRIVYFVFGPEI VISLWTGKLFLVLILITIVLASIIAFFKDNLKRRLAYSTVSQLGYISLGAFLLNLEGL SGGILHLFNHALIKITLFFCSGVIYIVTHKKKISEMAGIGKKMPWTMGAFAIASLGMV GIPPSVGFNSKWYLMLGSFNQGSLLIMGLLILSAMLNAGYFLPIVVSAFFKEPITDFE EHQGFFEAPVSMLAPTVILAIATIGFGIWYHFPSLVVEVVVQNIF" misc_feature 1182431..1183894 /locus_tag="Acear_1098" /note="putative monovalent cation/H+ antiporter subunit D; Reviewed; Region: PRK08375" /db_xref="CDD:181404" misc_feature 1182800..1183639 /locus_tag="Acear_1098" /note="NADH-Ubiquinone/plastoquinone (complex I), various chains; Region: Oxidored_q1; cl14187" /db_xref="CDD:187256" gene 1183912..1185804 /locus_tag="Acear_1099" /db_xref="GeneID:9513141" CDS 1183912..1185804 /locus_tag="Acear_1099" /note="COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001516:IPR001750:IPR003916; KEGG: amt:Amet_4151 NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: C0GDB1 NADH dehydrogenase (Quinone); PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus" /codon_start=1 /transl_table=11 /product="NADH/Ubiquinone/plastoquinone (complex I)" /protein_id="YP_003827687.1" /db_xref="GI:302391867" /db_xref="GeneID:9513141" /translation="MIDLELIPILLVILPLLGIGLGYLTKKYSFWAVLTTAANLILAI YLFKPIFAGKVIEKSYSFSIFPAGLYFKVDLLGYIFLAIVSFVWVLATVYSVSYMKQE ENVPRYYVFLLATLSSMMGVFVTGDFFSLLLFFEMVTIISYVLVVHNESEEAHYGGNY YLYMGVAGGLLILWATALIYKFTGNLIIESAFLQLSQLGVIKYVIASMMIIGFGVKAG MFPVHIWLPKAHPVAPSPASALLSGIIIKAGAYGILRVVTTLYWPVGEIHEIITLQNI GFGLVIFGAITMFLGMLRALFQWNVKRMLAYSSVSQMGYILMGIGAAGYLGTHGTLGF SGAVYHIINHALFKSSAFLIIGAIYFTTHEMDLKKLSGIGRNYPVLMVAFIATLFGIG GIPGFNGYASKTLIHHSLLEAFHLHHDFWILAAEKIFIITSAGTLCYFLKIFYYIFIK EEKTDQEDLPDMPFLIQIVVSVLGVCILVLGLIPDMVVKNLFQPLYQAYSLDVSIAKH VHFWSWGTLWDSISYLLAGSILFVFAVRGSWFEFSLSKGISIEKFWCGFLDYYFGIYN QVKKVRVILQDIGNLIFGLISDILLQIDLNVKGKEGGATIKNLNFSTLIVASLLLVIS LIFMLY" misc_feature 1184287..1185129 /locus_tag="Acear_1099" /note="NADH-Ubiquinone/plastoquinone (complex I), various chains; Region: Oxidored_q1; cl14187" /db_xref="CDD:187256" gene 1185845..1185946 /locus_tag="Acear_1100" /db_xref="GeneID:9513142" CDS 1185845..1185946 /locus_tag="Acear_1100" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827688.1" /db_xref="GI:302391868" /db_xref="GeneID:9513142" /translation="MENVKKSATIDINDYEFIVHLSTEDNGTARWEK" gene 1185943..1186245 /locus_tag="Acear_1101" /db_xref="GeneID:9513143" CDS 1185943..1186245 /locus_tag="Acear_1101" /note="KEGG: amt:Amet_4155 hypothetical protein; SPTR: C0GJ35 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827689.1" /db_xref="GI:302391869" /db_xref="GeneID:9513143" /translation="MRKVIVFLIILALGFTVAVIVSDMPTFGSKMVPSNNQVSQHYIK NSVEETKSHNIVGAILVDYRAYDTLIEIIVLFTTSVIVSSLFIIQNSDNSASQNKY" misc_feature <1185946..1186197 /locus_tag="Acear_1101" /note="Domain related to MnhB subunit of Na+/H+ antiporter; Region: MnhB; cl00676" /db_xref="CDD:186140" gene 1186467..1187690 /locus_tag="Acear_1102" /db_xref="GeneID:9513144" CDS 1186467..1187690 /locus_tag="Acear_1102" /note="COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153:IPR004684; KEGG: nth:Nther_0276 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; SPTR: B2A4V2 Sodium/hydrogen exchanger; PFAM: Sodium/hydrogen exchanger family" /codon_start=1 /transl_table=11 /product="transporter, CPA2 family (2.A.37)" /protein_id="YP_003827690.1" /db_xref="GI:302391870" /db_xref="GeneID:9513144" /translation="MDIVLGFSLLLFCGFIVGSLLKKLGIPSITGYIITGVIFGESVL GIQTYEQVETLVPITNLGLGIIALTIGEELVLGELKELGASIFNITLLQFLASFMFVV GGMLLFDVALPLALILGVMAATTGPAAITAVIEEYKTEGPFTNTLLATVALNDVLCIM AFGLTMTAAELLVNGSGGSILTMLSMPVIEIVGSIIVGYLIAWLFSFLAHKIDHQKEY LLIVLTVVLMTMQLAGRYHLSPLLINLMAGFALTNFFNAQHEIREVIEAVEVPIYVAF FTLAGAKLHLGALFNTGIIGIAFIFFRVLGKILGARAGAVISNSIPSIKNYLGVSLIA QAGVAVGLIFIASSNFPQFSDIITSVVLASVAISELLGPLAAKLGLTKADEVNKAVEA DGCSIKKEIKISSTT" misc_feature 1186467..1187600 /locus_tag="Acear_1102" /note="Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]; Region: KefB; cl10482" /db_xref="CDD:164194" misc_feature 1186491..1187597 /locus_tag="Acear_1102" /note="Sodium/hydrogen exchanger family; Region: Na_H_Exchanger; pfam00999" /db_xref="CDD:189798" gene 1187794..1189215 /locus_tag="Acear_1103" /db_xref="GeneID:9513145" CDS 1187794..1189215 /locus_tag="Acear_1103" /note="COGs: COG1757 Na+/H+ antiporter; InterPro IPR004770:IPR018461; KEGG: amt:Amet_4617 Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like; SPTR: A6TWX0 Na+/H+ antiporter NhaC; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter family; TIGRFAM: Na+/H+ antiporter NhaC" /codon_start=1 /transl_table=11 /product="sodium/proton antiporter, NhaC family (TC 2.A.35.1.1)" /protein_id="YP_003827691.1" /db_xref="GI:302391871" /db_xref="GeneID:9513145" /translation="MERERKPEFFEALLPVLITAVLLFTGIVFLGIDPHIPLVLGTIV ASILGAKLGFSWEEIKDGLLDGINIAMSSVIILLIIGIVIGVWILSGTVPTMIYYGMK LLSPKIFLVATALICAVVSVSSGSSWTTAGTVGIALIGVGEGLGIPLPMVAGAIISGA YFGDKMSPLSDTTNLAPAMAGSELFEHIKHMIYTTAPAFIISLILFWILGRNFGAESL DAEKIDLILNTLNQTFTINIWMLIPAVVVFTMAAMKLPAIPTLISGSVIGGVFAMLFQ GVGFSAVINAMHYGYSSETGVEVLDSLLSRGGLNSMMWTISLILCALAFGGVLDKVSV LEVIVNKILSFADTTGKLIASNIISCIGANALLGDQFLSIIVPGRMYRAAYEKKGLHP KNLSRVLEDSGTLTAVLIPWTAGGAYMASTLGVDTIAYLPYCFFNLLVPVVSMVYGFM DITIEPSEASESASNAQTSETIT" misc_feature 1187806..1189149 /locus_tag="Acear_1103" /note="Na+/H+ antiporter NhaC; Region: antiport_nhaC; TIGR00931" /db_xref="CDD:188097" misc_feature 1188268..1189143 /locus_tag="Acear_1103" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene 1189325..1190818 /locus_tag="Acear_1104" /db_xref="GeneID:9513146" CDS 1189325..1190818 /locus_tag="Acear_1104" /EC_number="4.2.3.1" /note="COGs: COG0498 Threonine synthase; InterPro IPR004450:IPR000634:IPR001926; KEGG: cth:Cthe_1381 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; PRIAM: Threonine synthase; SPTR: A3DF84 L-threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase" /codon_start=1 /transl_table=11 /product="L-threonine synthase" /protein_id="YP_003827692.1" /db_xref="GI:302391872" /db_xref="GeneID:9513146" /translation="MKYISTRGNYDKVDASEAIRLGMVPTGGLFVPEEIPTLSRETIN SMQNSSYQEIVEKILDEFLTDYTEQELQEAVAKAYNCDNFSVEEITSLYKLDDNSHVL ELWHGPTAAFKDLALQVMPYLLSQAIEKEETDKDILILVATSGDTGKAALEGFKNVDG IEIIVFYPEEGVSQVQKRQMVTTTGDNTAVVAVAGNFDDCQSSVKEIFGDQNFKEVIA DKGYQLSSANSINWGRLVPQIIYYFAAYAELLNQKEIKPGEEINITVPTGNFGNILAS YYAYRMGLPVNKFICASNDNKVLTDFFKTGVYDKNRDFKKTVSPSMDILISSNLERFL FEVTGHDAQKVTNWYQQLKEEGKFEVDEETKDRINEIFVGEYATEDETKETIQAVYQE HNYVIDPHTAVGVNVYNKYFNNYNDKTTTVIDATANPYKFGTTVLSAINDSVITDEMT EFDILEELNEETGVEIHSGLEGLANQEIKHELKCKVDGIRDIIQQVL" misc_feature 1189325..1190710 /locus_tag="Acear_1104" /note="Threonine synthase [Amino acid transport and metabolism]; Region: ThrC; COG0498" /db_xref="CDD:30844" misc_feature 1189328..1190779 /locus_tag="Acear_1104" /note="Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants...; Region: Thr-synth_2; cd01560" /db_xref="CDD:107203" misc_feature order(1189661..1189663,1190126..1190131,1190600..1190602) /locus_tag="Acear_1104" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:107203" misc_feature 1189661..1189663 /locus_tag="Acear_1104" /note="catalytic residue [active]" /db_xref="CDD:107203" gene complement(1190873..1192570) /locus_tag="Acear_1105" /db_xref="GeneID:9513147" CDS complement(1190873..1192570) /locus_tag="Acear_1105" /note="COGs: COG0058 Glucan phosphorylase; InterPro IPR011834:IPR000811; KEGG: hmo:HM1_2568 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; SPTR: B0TAZ4 phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases" /codon_start=1 /transl_table=11 /product="alpha-glucan phosphorylase" /protein_id="YP_003827693.1" /db_xref="GI:302391873" /db_xref="GeneID:9513147" /translation="MQNKPNIAYFCMEYGLDEELPIYSGGLGVLAGDYLKAAADLDLP VIGLGILWEQDYTQQYIGEDGRPYDTFPTFDFDFLTDTGITVTVNIEGEEVDCKVRLV DKYDNAPLYLLDTNFPESEHGWITSKLYGGDDKDRLAQEMVLGIGGVRALRKLDIDVD KYHFNEGHAVLAGVELIREKMEAGMSFDEAKEATREEIVFTTHTPVRAGNEIHEHRLL QHMKAYNSLNYKQMKEIGDNPFNMTVAGLRLSSITNGVSDLHQETTKEMWKDVDDKAP IIGITNGVHAKTWQDERIKNAYEAGEDLWQPHYELKQELVDYVKEVDGANLNPDSLII GFARRTAPYKRSELIFRDADAIDPLLREGKIQLVFSGKAHPNDDTGKDIVQNLVQMEQ KYTDSVVFLENYDMDIARKMVRGSDVWLNNPRRPLEASGTSGMKAAMNGVLNLSVVDG WLAEGPEHGVSGWLIDEVLHEEYNHLSEDEQDLRALHQIIYDEVIPTYYENHEEWKKM MQASIDMSHEQFSAQRMVKEYYDRLYNITSKERDKDFEAIEVITESIEEVHFPQHEM" misc_feature complement(1190969..1192561) /locus_tag="Acear_1105" /note="Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate...; Region: Glycosyltransferase_GTB_type; cl10013" /db_xref="CDD:186885" misc_feature complement(1190966..1192552) /locus_tag="Acear_1105" /note="alpha-glucan phosphorylases; Region: more_P_ylases; TIGR02094" /db_xref="CDD:162699" gene 1192810..1194948 /locus_tag="Acear_1106" /db_xref="GeneID:9513148" CDS 1192810..1194948 /locus_tag="Acear_1106" /note="COGs: COG2217 Cation transport ATPase; InterProIPR006404:IPR006416:IPR001757:IPR006121:IPR 018303:IPR008250:IPR005834:IPR001366; KEGG: bcr:BCAH187_A0723 heavy metal-transporting ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; haloacid dehalogenase; SPTR: C2XPA0 Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase" /codon_start=1 /transl_table=11 /product="ATPase P" /protein_id="YP_003827694.1" /db_xref="GI:302391874" /db_xref="GeneID:9513148" /translation="MANTYKAVAGLKKEFLLQGLGCANCASKMEHRINELDNVKTAEL NFTVQKLIITVEDESELDETIEAAEEIIHDLEPEVEVKEAEEEKDSESIMDNAEIKRK GLRITVGSFFFIAALIAPVSFNFKLVLFITAYLTIGGGVLKRAVRNISKGQFFDENFL MALATTGAFAIQEFPEAVSVMLFYQLGELLQNIAVDRSRRSIKDLMDIKAEYANLKTE TGVKEVDPAEVNIGDRIIIKPGERVPLDGKVISGEAQMDTSALTGESAPRKVESGEDI LSGFINKTGVLTVEVKKELQESMITRILDLVENASAKKAPTEKFITKFARYYTPAVVF VALALATLPPLLLTDALFADWIYRALVFLVISCPCALLISIPLGFFGGIGAASKRGIL VKGGNYLEALNNLDRVIFDKTGTLTEGNFEVDEVIAAKGYTKQEVLDLAAKVEVHSNH PIAQSILAASSKDINAEDIEGYEELSGQGIKAKIAGEEVLVGNEKLLSKLALESNRYK SEDKTVVNVVVEEDYIGSILIADQIKSDAKEAIAELKELGIKEVVMLTGDNKIVAERI VDKLGLDSYQAELLPNEKVKKTERLLAQSSNDGKLAFVGDGINDAPVLARADVGVAMG GLGSDAAIEAADIVLMTDEPAKLGEALEVASDTKRIVWQNIILTLGIKGIVMALGAVG MATMWEAVFADVGVALLAVLNSLRIIKSKK" misc_feature 1192843..1194945 /locus_tag="Acear_1106" /note="Cation transport ATPase [Inorganic ion transport and metabolism]; Region: ZntA; COG2217" /db_xref="CDD:32399" misc_feature 1192849..1193013 /locus_tag="Acear_1106" /note="Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain...; Region: HMA; cl00207" /db_xref="CDD:193707" misc_feature 1193347..1194012 /locus_tag="Acear_1106" /note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122" /db_xref="CDD:189402" misc_feature 1194373..1194789 /locus_tag="Acear_1106" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" gene 1195062..1195394 /locus_tag="Acear_1107" /db_xref="GeneID:9513149" CDS 1195062..1195394 /locus_tag="Acear_1107" /note="COGs: COG1278 Cold shock protein; InterProIPR011129:IPR019844:IPR016027:IPR002059:IPR 012340; KEGG: hor:Hore_16470 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B8CYM7 Putative cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain" /codon_start=1 /transl_table=11 /product="cold-shock DNA-binding domain protein" /protein_id="YP_003827695.1" /db_xref="GI:302391875" /db_xref="GeneID:9513149" /translation="MVSLSEIVGEEAEEDISKSVDEGDAAEEESITVDESVAVDSDTG SRTGKVKWFDTKKGYGFIEQEDGDDIFVHYTAIQEEGFKDLEEEQQVSFEVVESDKGL QAENVTKV" misc_feature 1195197..1195388 /locus_tag="Acear_1107" /note="Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein...; Region: CSP_CDS; cd04458" /db_xref="CDD:88424" misc_feature order(1195215..1195217,1195242..1195244,1195272..1195274, 1195359..1195361) /locus_tag="Acear_1107" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:88424" misc_feature order(1195233..1195253,1195269..1195280) /locus_tag="Acear_1107" /note="RNA-binding motif; other site" /db_xref="CDD:88424" gene 1195536..1196711 /locus_tag="Acear_1108" /db_xref="GeneID:9513150" CDS 1195536..1196711 /locus_tag="Acear_1108" /EC_number="3.4.21.108" /note="COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR009003:IPR001254:IPR001940; KEGG: hor:Hore_00650 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: B8D072 2-alkenal reductase; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)" /codon_start=1 /transl_table=11 /product="HtrA2 peptidase" /protein_id="YP_003827696.1" /db_xref="GI:302391876" /db_xref="GeneID:9513150" /translation="MWNNIAVSRKSLIKYLAVIMIGIVVSGGLFIGLSTGQAFAQNEA DSTQNVYKSNFFADIASKVDAAVVRINVKVEIDSEKLKENYPFFNDPYFKKFFEQQIP FEGEGNPKFRQGFGTGFIISQDGYILTNEHVIHGAEEVTVKLSDRKEPIKAEVVGTDF SLDLAVLKINVNDKLPAVKLGNSDNIKPGDWTVAIGNPYGLNHTVTVGVISALGRPLR IRQGKKPRVYKNMIQTDAAINPGNSGGPLLNREGQVIGINTAINAQAQGIGFAIPINE AKRVLSDLKQHGKVIRPWMGVYMQPITEEMTEYFNLESTEGALIADIISDSPADKAGL KAGDVIVEINEIAVENPEDVVKLVEKAEVGDKMVLRVLREGYKRFVSVTLDERPKEY" misc_feature 1195608..1196705 /locus_tag="Acear_1108" /note="Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]; Region: DegQ; COG0265" /db_xref="CDD:30614" misc_feature 1195878..1196378 /locus_tag="Acear_1108" /note="Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic...; Region: Tryp_SPc; cl00149" /db_xref="CDD:193682" misc_feature 1196412..1196681 /locus_tag="Acear_1108" /note="PDZ domain of tryspin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-...; Region: PDZ_serine_protease; cd00987" /db_xref="CDD:29044" misc_feature order(1196415..1196426,1196430..1196432,1196583..1196588, 1196595..1196600) /locus_tag="Acear_1108" /note="protein binding site [polypeptide binding]; other site" /db_xref="CDD:29044" gene 1196783..1197409 /locus_tag="Acear_1109" /db_xref="GeneID:9513151" CDS 1196783..1197409 /locus_tag="Acear_1109" /EC_number="3.5.4.9" /note="COGs: COG3404 methenyl tetrahydrofolate cyclohydrolase; InterPro IPR007044; KEGG: aoe:Clos_0294 formiminotransferase-cyclodeaminase; PFAM: Formiminotransferase-cyclodeaminase; PRIAM: methenyltetrahydrofolate cyclohydrolase; SPTR: A8ML40 Formiminotransferase-cyclodeaminase; PFAM: Formiminotransferase-cyclodeaminase" /codon_start=1 /transl_table=11 /product="methenyltetrahydrofolate cyclohydrolase" /protein_id="YP_003827697.1" /db_xref="GI:302391877" /db_xref="GeneID:9513151" /translation="MIEEEKIGKFLDDFASDKHTPGGGSAAALSGALGAASTCMVASL TVGKDDYADVKEKMEELIADTTELKDDYLELVDKDMEVFNDFMEALKLPKETEEEKEK RAEALKEASIEATEVPFAMAKKSLEVLKQALIAAKKGNIQAVSDAGVGAIEAWAALEA AELNVNINLASMNNEEYVAKKRQEMKELKEEAKELKEEVLEITNEKIG" misc_feature 1196801..1197322 /locus_tag="Acear_1109" /note="Formiminotransferase-cyclodeaminase; Region: FTCD_C; cl01350" /db_xref="CDD:194108" gene complement(1197451..1198230) /locus_tag="Acear_1110" /db_xref="GeneID:9513152" CDS complement(1197451..1198230) /locus_tag="Acear_1110" /note="COGs: COG3773 Cell wall hydrolyses involved in spore germination; InterPro IPR002482:IPR018392:IPR011105; KEGG: tpd:Teth39_0988 cell wall hydrolase, SleB; PFAM: cell wall hydrolase SleB; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; SPTR: B0K930 Cell wall hydrolase, SleB; PFAM: Cell Wall Hydrolase; LysM domain" /codon_start=1 /transl_table=11 /product="cell wall hydrolase SleB" /protein_id="YP_003827698.1" /db_xref="GI:302391878" /db_xref="GeneID:9513152" /translation="MHKFKFKLPLIIGLIGILIFSSVGIALGSVVHRVSPGENLWTIA RWYNTTVNQIKTANNYWSNRITVGQQLVIPGNFKTHRVKPGDSLHKIAHRFSVSINQL RIHNGIWHNIIRSGDILTIPSSTEAKNSYAANTVPNYISDKEFDLLSRLVQAEALGES FEGKVAVAAVVLNRVEDSKFPNTISKVIYQPLAFEPVMNGRIYHPANNESIKAVEAAL NGWDPTNNSLYFYNPAKVYSPYNWIWSRSITTRIDNHVFAL" misc_feature complement(1198009..1198143) /locus_tag="Acear_1110" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1198093..1198095,1198102..1198104, 1198117..1198119,1198126..1198128,1198135..1198137)) /locus_tag="Acear_1110" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature complement(1197865..1197993) /locus_tag="Acear_1110" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cl00107" /db_xref="CDD:153515" misc_feature complement(1197457..1197759) /locus_tag="Acear_1110" /note="Cell Wall Hydrolase; Region: Hydrolase_2; pfam07486" /db_xref="CDD:191754" gene 1198401..1198646 /locus_tag="Acear_1111" /db_xref="GeneID:9513153" CDS 1198401..1198646 /locus_tag="Acear_1111" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827699.1" /db_xref="GI:302391879" /db_xref="GeneID:9513153" /translation="MEFKDKLIQRLKEDPDVFNEIRSEIIASDFNREKKEKIGFIDKP EESNFLEERSDEKLIEAIAANLEYFIEYSKENEERWV" gene 1199073..1199612 /locus_tag="Acear_1112" /db_xref="GeneID:9513154" CDS 1199073..1199612 /locus_tag="Acear_1112" /note="InterPro IPR006339:IPR007159; KEGG: bbe:BBR47_01050 stage V sporulation protein T; PFAM: SpoVT/AbrB domain protein; SPTR: C0ZHE1 Stage V sporulation protein T; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T" /codon_start=1 /transl_table=11 /product="AbrB family transcriptional regulator" /protein_id="YP_003827700.1" /db_xref="GI:302391880" /db_xref="GeneID:9513154" /translation="MRATGIVRKIDNLGRVVIPKEIRKEMKINNGNTLEIFVDQDDSV ILKKYSPVDELDQVQDYVNTLVETTECDVMITDTDKVIAGSEELERYERRPVGAVIKE TMENRNTEIIEEGTKGDICEDYEHNEEKVGSILIAPVMKQGDVLGAVILSSQDQSLGD YEVKIAETTAKILSKQLGL" misc_feature 1199076..1199603 /locus_tag="Acear_1112" /note="stage V sporulation protein T; Region: spore_V_T; TIGR02851" /db_xref="CDD:131898" misc_feature 1199094..1199234 /locus_tag="Acear_1112" /note="SpoVT / AbrB like domain; Region: SpoVT_AbrB; cl00877" /db_xref="CDD:186236" gene 1199770..1200153 /locus_tag="Acear_1113" /db_xref="GeneID:9513155" CDS 1199770..1200153 /locus_tag="Acear_1113" /note="COGs: COG0640 transcriptional regulator protein; InterPro IPR001845:IPR018334:IPR011991; KEGG: hor:Hore_22370 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: B8D0P6 Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="YP_003827701.1" /db_xref="GI:302391881" /db_xref="GeneID:9513155" /translation="MPENDKCLSCEVYKIHEENIKLLQDEELPEDIILKLAETFKVLG DPTRIKIINALSNVELCVCDISEHLEMSSSAVSHQLRVLRNLNLVKYRKEGRTVYYSL DDDHILQLFSQCLEHVLEKEDIDKS" misc_feature 1199887..1200117 /locus_tag="Acear_1113" /note="Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to...; Region: HTH_ARSR; cd00090" /db_xref="CDD:28974" misc_feature order(1199887..1199892,1199896..1199898,1199905..1199907, 1199914..1199919,1199926..1199931,1199938..1199940, 1200028..1200030,1200085..1200090,1200094..1200102, 1200106..1200114) /locus_tag="Acear_1113" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:28974" misc_feature order(1199890..1199895,1199905..1199913,1199950..1199958, 1199983..1199994,1199998..1200003,1200010..1200015, 1200019..1200024,1200040..1200048,1200061..1200069) /locus_tag="Acear_1113" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28974" misc_feature order(1199950..1199952,1199959..1199961,1200085..1200087) /locus_tag="Acear_1113" /note="putative Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28974" gene 1200696..1201142 /locus_tag="Acear_1114" /db_xref="GeneID:9513156" CDS 1200696..1201142 /locus_tag="Acear_1114" /note="COGs: COG3238 conserved hypothetical protein; InterPro IPR006750; KEGG: mta:Moth_0102 hypothetical protein; PFAM: protein of unknown function DUF606; SPTR: C0GJ02 Putative uncharacterized protein; PFAM: protein of unknown function, DUF606" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827702.1" /db_xref="GI:302391882" /db_xref="GeneID:9513156" /translation="MTQTFFFIFAVIAGTAMAIQGSLNSVLGKVIGFWEATFVVHIIA TSLVAVIIFIFSLNKGDFGNLMETPWYTYIGGILNVIILYGVVVTIPKLGVANATTLI IVGQVTTAVIIDHFGFWGLEAVPFQWTKLIGVGLLALGARILLNTG" misc_feature 1200708..1201124 /locus_tag="Acear_1114" /note="Protein of unknown function, DUF606; Region: DUF606; cl01273" /db_xref="CDD:194091" gene 1201286..1201603 /locus_tag="Acear_1115" /db_xref="GeneID:9513157" CDS 1201286..1201603 /locus_tag="Acear_1115" /note="COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR005746:IPR017936:IPR017937:IPR012336:IPR 013766:IPR006662:IPR012335; KEGG: aae:aq_1916 thioredoxin; PFAM: Thioredoxin domain; SPTR: A5ZAU9 Putative uncharacterized protein; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="YP_003827703.1" /db_xref="GI:302391883" /db_xref="GeneID:9513157" /translation="MVEESTVKLTEENFKNEVMKSDKKVLVDFWAPWCGPCKQVSPIV EELGEEHEEVKIGKVNVDENQNLAAEYGIMSIPTLIVFEDGEILNKQVGAASKERLES LIK" misc_feature 1201319..1201600 /locus_tag="Acear_1115" /note="TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox...; Region: TRX_family; cd02947" /db_xref="CDD:48496" misc_feature order(1201385..1201387,1201394..1201396) /locus_tag="Acear_1115" /note="catalytic residues [active]" /db_xref="CDD:48496" gene 1201821..1204070 /locus_tag="Acear_1116" /db_xref="GeneID:9513158" CDS 1201821..1204070 /locus_tag="Acear_1116" /note="COGs: COG0209 Ribonucleotide reductase alpha subunit; InterPro IPR013344:IPR008926:IPR013509:IPR000788; KEGG: tye:THEYE_A0131 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; SPTR: B8D0M9 Ribonucleoside-diphosphate reductase; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent" /codon_start=1 /transl_table=11 /product="ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent" /protein_id="YP_003827704.1" /db_xref="GI:302391884" /db_xref="GeneID:9513158" /translation="MSLDLLENTKNLLEDRYLKRNEKREIVETPEELFIRVAENIAAA EEDEEKQEYYEEEFYNLMTDFKFLPNSPTLMNAGTELQQLAACFVLPVEDSMEGIFTA VRNAALIHKSGGGTGFAFSRLRPKDDVVKSTGGVSSGPLSFMKVFNSATNTVKQGGKR RGANMGMLRVDHPDILDFIHAKGELNDKNQELYDEFKESLEDTYLAPEVIDKKLKQYK QKLLDDQFSNFNLSVGVTDEFMEAVKNDENYELINPRTGQVVGELDARKVFNLIVKYA WKNGEPGLVFLDEINHKNPVPNLGEIEATNPCGEQPLLPNEACNLGSINLSKFVDDGT VDWEELKETIDLAVRFLDNVIDMNNYPLDKIEEQVMKARKIGLGVMGFHEMLIKLGIA YNSDEAVEMAKKVMKFINEHAHQYSQKLAEEKGAFPAWEESKYKTPKRNATLTTIAPT GSISFLAGTSGGIEPFFDFSYTHTDGDGNTSRFEYDFTSEAEEEVLVTTMDIAPEWHI KIQAAFQNYVDNAVSKTINLPNTATKEDIREAYILAYELNCKGLTVYRDGSRESQVLK SSDDKKEETLRTDKIYPRTRPLIADGKTVRYDTGCGKLYLTINVDDNGEPIETFLTTG SDGGCQVMTEAVSRLTSMALRAGIAPEEIIDQLSSTSTCPSFMYQRGKGAELTGRSCS DVVGKALKKILETSNGLEKISKEEITETEEENEIDSSLTPKCPECGNKLIFEEGCSTC KNCGYSNCS" misc_feature 1201833..1204067 /locus_tag="Acear_1116" /note="ribonucleotide-diphosphate reductase subunit alpha; Validated; Region: PRK08665" /db_xref="CDD:181531" misc_feature 1201857..1202066 /locus_tag="Acear_1116" /note="Ribonucleotide reductase, all-alpha domain; Region: Ribonuc_red_lgN; pfam00317" /db_xref="CDD:189500" misc_feature 1201998..1203494 /locus_tag="Acear_1116" /note="Class II ribonucleotide reductase, dimeric form; Region: RNR_II_dimer; cd02888" /db_xref="CDD:153089" misc_feature order(1202028..1202033,1202076..1202078,1202157..1202165, 1202298..1202303,1202307..1202309,1202736..1202744, 1202748..1202750,1202781..1202783,1203162..1203179) /locus_tag="Acear_1116" /note="active site" /db_xref="CDD:153089" misc_feature order(1202061..1202063,1202106..1202111,1202118..1202123, 1202127..1202132,1202139..1202144,1202151..1202153, 1202205..1202207,1202214..1202225,1202232..1202234, 1202247..1202249,1202256..1202258,1202265..1202270, 1202277..1202279,1202283..1202291,1202295..1202297) /locus_tag="Acear_1116" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:153089" misc_feature order(1202100..1202102,1202103..1202108,1202115..1202117, 1202151..1202153,1202190..1202192,1202208..1202210, 1202214..1202216,1202229..1202234,1202247..1202249, 1202277..1202285) /locus_tag="Acear_1116" /note="effector binding site; other site" /db_xref="CDD:153089" misc_feature 1203606..1203893 /locus_tag="Acear_1116" /note="TSCPD domain; Region: TSCPD; cl14834" /db_xref="CDD:196835" gene complement(1204117..1204587) /locus_tag="Acear_1117" /pseudo /db_xref="GeneID:9513159" gene 1204893..1205522 /locus_tag="Acear_1118" /db_xref="GeneID:9513160" CDS 1204893..1205522 /locus_tag="Acear_1118" /note="COGs: COG3773 Cell wall hydrolyses involved in spore germination; InterPro IPR011105; KEGG: hor:Hore_06410 cell wall hydrolase SleB; PFAM: cell wall hydrolase SleB; SPTR: B8D2H1 Cell wall hydrolase SleB; PFAM: Cell Wall Hydrolase" /codon_start=1 /transl_table=11 /product="cell wall hydrolase SleB" /protein_id="YP_003827705.1" /db_xref="GI:302391885" /db_xref="GeneID:9513160" /translation="MIRHMRLKKIITYIVLISLLVPFLTGFVLIEPVWAFGSEDYKSV LKALFMVFLLSFLGDDSDDSKESNSNNDSSLSEEYVRYQPTEEELETLARAVYSEARG ESYVGQVAVAAVILNRVDSPEFPNTINGVVYQRHDGQYAFSAVWDGQIYLTPDETAYQ TAKDALNGWDPSDGALYYYNPDTATASWIFENTVPIKRIGKHLFANLKI" misc_feature 1205193..1205510 /locus_tag="Acear_1118" /note="Cell Wall Hydrolase; Region: Hydrolase_2; pfam07486" /db_xref="CDD:191754" gene 1205588..1206097 /locus_tag="Acear_1119" /db_xref="GeneID:9513161" CDS 1205588..1206097 /locus_tag="Acear_1119" /note="KEGG: tex:Teth514_0072 hypothetical protein; SPTR: C6Q6N2 S-layer domain protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827706.1" /db_xref="GI:302391886" /db_xref="GeneID:9513161" /translation="MYRGVVLIGILITLLVTTGCNVDDNKSGTIIYNSEQELIGEWTK QEPPQETKYKLITEENKQKVLTTYSDDEAKPYYQKIKELDLTKKVAVLAYLGPMPTGG YGIQINKVIQKNNQLIAEIKYISPQPDDMVTMAVTYPYDLVTLKIDKLSVEESSKLDL VIVEENNVK" gene 1206705..1207433 /locus_tag="Acear_1120" /db_xref="GeneID:9513162" CDS 1206705..1207433 /locus_tag="Acear_1120" /note="COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: aoe:Clos_2218 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: A8MIX1 Cell wall hydrolase/autolysin; PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD" /codon_start=1 /transl_table=11 /product="cell wall hydrolase/autolysin" /protein_id="YP_003827707.1" /db_xref="GI:302391887" /db_xref="GeneID:9513162" /translation="MWIVINRKLLLYIVIILLILTFQLKDRYLSSSVAVNLDFPLNKK VIMIDPGHGGIDGGTNKQKVLEKNINLAIALKLKKVLDHRNVTVKLTRKEDQALDHLN NHSSSRHLRDLWARVEMINQEKIDLFISLHVNAGVSYLRGPKIFYKADNKRLAYLLQN KLNNLEYKDIKHPTNTPLAADYFVLNHAKPPGVIVEVGYITNPVDYRLLQQDDYQWVM ARTLAAGIEEYFSSFSFYLEKIRD" misc_feature 1206837..1207385 /locus_tag="Acear_1120" /note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino...; Region: MurNAc-LAA; cd02696" /db_xref="CDD:119407" misc_feature order(1206858..1206860,1206900..1206902,1207098..1207100, 1207290..1207292) /locus_tag="Acear_1120" /note="active site" /db_xref="CDD:119407" misc_feature order(1206858..1206860,1206900..1206902,1207098..1207100) /locus_tag="Acear_1120" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:119407" gene 1207611..1208189 /locus_tag="Acear_1121" /db_xref="GeneID:9513163" CDS 1207611..1208189 /locus_tag="Acear_1121" /note="COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR014284:IPR013325:IPR013324:IPR007627:IPR 013249; KEGG: sth:STH845 RNA polymerase ECF-type sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: Q67R63 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma-24 subunit, ECF subfamily" /protein_id="YP_003827708.1" /db_xref="GI:302391888" /db_xref="GeneID:9513163" /translation="MDKEDKRLIADCKKGNNKAFRLLINKYKQDCLNAAYQLVSDKEL AEDIAQEAFVRIYKSIDNFRGDSSFFTWVYQIILNLCRDHFRKQPKENPVSLEDSALE SILRKEIPDSDDVPENHLEKQELQRIIKESLTELSFKHRQVIVLRDLQGFTYKRIAEI LEIPLGTVKSRLNTARNRLQKKLAVAKRKYIK" misc_feature 1207635..1208162 /locus_tag="Acear_1121" /note="RNA polymerase sigma factor RpoE; Provisional; Region: PRK09652" /db_xref="CDD:182019" misc_feature 1207677..1207874 /locus_tag="Acear_1121" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature 1207986..1208150 /locus_tag="Acear_1121" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cd06171" /db_xref="CDD:100119" misc_feature order(1208019..1208021,1208049..1208051,1208067..1208072, 1208100..1208102,1208106..1208111,1208115..1208123, 1208127..1208132,1208136..1208138) /locus_tag="Acear_1121" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:100119" gene 1208221..1208781 /locus_tag="Acear_1122" /db_xref="GeneID:9513164" CDS 1208221..1208781 /locus_tag="Acear_1122" /note="KEGG: dth:DICTH_0687 hypothetical protein; SPTR: B5YDF1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="transmembrane anti-sigma factor" /protein_id="YP_003827709.1" /db_xref="GI:302391889" /db_xref="GeneID:9513164" /translation="MECKKVQQTLSAYLDQEISDFETKKIERHLDQCEKCSLDYQALQ ETVDKLDYYPQIEADDGFTEEIMDKIEEEKSLSNLVFEDWLSKFILSHKLVITVIALF LLLCIILVFTIINRSSVFIVGNVFYHLFSSSYFVSDNLVTVYPKLLLYLEGAFLISLI GFIFMLKQVKEWDKFSDLNNKLNEEN" misc_feature 1208224..>1208370 /locus_tag="Acear_1122" /note="mycothiol system anti-sigma-R factor; Region: antisig_RsrA; cl11829" /db_xref="CDD:189233" gene 1208784..1209635 /locus_tag="Acear_1123" /db_xref="GeneID:9513165" CDS 1208784..1209635 /locus_tag="Acear_1123" /note="KEGG: pjd:Pjdr2_1704 hypothetical protein; SPTR: A1HLQ7 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827710.1" /db_xref="GI:302391890" /db_xref="GeneID:9513165" /translation="MLDYRQNNFINIYIIILITILILFTNYNIGLANTDMKNLIKHGS VSITSDQVVENVIVVGGRVSIAGTVKEDVVVLGGNLEVKSSAVIGGNIGVVGGKIDQS SQAVVTENIFNLELSPADFDILLVGILIFLSFMFVKYLVAIVLLLTAILLNLFLPGQI QEMARVINEESFKVTLLGIFGTILFGLLIIISAITIIGSPISILILGLVLIGMIVGFN GLAYLIGDQLSRILAIKVNKDLTIGILGICNLILVWFIPIIGSLLFLLFCTLGFGAII FKILPLE" gene 1209658..1210704 /locus_tag="Acear_1124" /db_xref="GeneID:9513166" CDS 1209658..1210704 /locus_tag="Acear_1124" /note="InterPro IPR005242; KEGG: dth:DICTH_0817 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: B5YDS3 Membrane protein, PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827711.1" /db_xref="GI:302391891" /db_xref="GeneID:9513166" /translation="MDRKIKKGLIFFYIVSLVVIGGIIYYTANIETWHQILRLKLEYL VLTLLLTVVMWLLDFMRIKELAKGIGENISLPLGLKLVWTNLFLAAVTPFQTGGGPMQ VYLMYRKNKLKVPKGIVITSMKFMIGLLFFAVVSPMVIVLYPNLLPENKFKYIFYYIV FFFAITGIIYLLIVFFPKKVKKALYSIADFLAGFSFINSKYTDKLLKFGIRNINEFNN SLKVYLTESRKNLLLSILYTILFLVVQFSIPILLIRALGFNVSSVKIILNQIILTTLM YFTPTPGGSGIAEGGFMVLFLQYVPKYSIGILILLWRFFVVYLGVIFGLYIFIKVLGE VTLSKIMNIETEGS" misc_feature 1209697..1210665 /locus_tag="Acear_1124" /note="Uncharacterised protein family (UPF0104); Region: UPF0104; cl04219" /db_xref="CDD:194802" gene 1210711..1211928 /locus_tag="Acear_1125" /db_xref="GeneID:9513167" CDS 1210711..1211928 /locus_tag="Acear_1125" /note="COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: dth:DICTH_0815 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: C1I989 Putative uncharacterized protein; PFAM: glycosyl transferases group 1" /codon_start=1 /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_003827712.1" /db_xref="GI:302391892" /db_xref="GeneID:9513167" /translation="MHIAMFTNNYKPFVGGVPISIDLFAREFRKLGHKVSIFAPEYNE EVEEEEENTFRVPSLKMIKYGDSCFPIPISGLSDFKKNFGDFDIDIIHCHHPFFLGRV GQKLGNKHDIPVVYTYHTRFKEYFIHLPAGVRQVCQVAIDKLLKDFCNRSDLIFTPTD GMTEYLINKEVQSKIKVIPTGINIDNYKKYEDGKNEDYRKQLGLKPDENILLFVSRLS TEKNIGFLFESLQPLLRSNEDNKTKLLMVGDGPQKEELMQKTKNLNIDEQVKFLGKKD REELIRIYKLADIFVFSSLSETQGIVIIEALAGKTPVVALNGTGVKDILTDGRDGFLL EIGDKDGFRNRILKLLNNDELYNNMSEEAWKKANQYSINTLAKKVLSHYRSLCNGAKT NDYKSEVAAGRER" misc_feature 1210711..1211877 /locus_tag="Acear_1125" /note="Glycosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaG; COG0438" /db_xref="CDD:30787" misc_feature 1210714..1211868 /locus_tag="Acear_1125" /note="This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-...; Region: GT1_UGDG_like; cd03817" /db_xref="CDD:99987" misc_feature order(1210756..1210758,1211350..1211358,1211545..1211547, 1211614..1211616) /locus_tag="Acear_1125" /note="putative ADP-binding pocket [chemical binding]; other site" /db_xref="CDD:99987" gene 1211967..1212548 /locus_tag="Acear_1126" /db_xref="GeneID:9513168" CDS 1211967..1212548 /locus_tag="Acear_1126" /note="KEGG: cbk:CLL_A1144 lipoprotein; SPTR: B2THK0 Putative lipoprotein" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="YP_003827713.1" /db_xref="GI:302391893" /db_xref="GeneID:9513168" /translation="MPRNMNLTIGIAIIALIIGALSGAYYSKVLDGEIDVEDQELQEE YFYPVYGADRQAEKTIVNFYIKLSEDLTLKEKLKIIADKLSRFKFDHLPIEVVKIKKN KQDIAIINLCEHEWNRSQDGSDELRGISWRSHYFQGSAGGMITSETLIRTFLQRDYNG DWVDGVKFLYEGREITQEMTQHIHLSGIKDRKE" gene 1212692..1212850 /locus_tag="Acear_1127" /db_xref="GeneID:9513169" CDS 1212692..1212850 /locus_tag="Acear_1127" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827714.1" /db_xref="GI:302391894" /db_xref="GeneID:9513169" /translation="MVYLREPGYFGHRGNLRVYQPKCIYCEESIYSNERILWTDYGLA HRDCFLEI" gene complement(1212907..1213461) /locus_tag="Acear_1128" /db_xref="GeneID:9513170" CDS complement(1212907..1213461) /locus_tag="Acear_1128" /note="InterPro IPR001387:IPR011051:IPR013096:IPR014710; KEGG: hor:Hore_01840 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; cupin; SMART: helix-turn-helix domain protein; SPTR: B8D0X7 transcriptional regulator, XRE family; PFAM: Cupin domain; Helix-turn-helix" /codon_start=1 /transl_table=11 /product="XRE family transcriptional regulator" /protein_id="YP_003827715.1" /db_xref="GI:302391895" /db_xref="GeneID:9513170" /translation="MEDIDLNIGTKLHQIRKKKGYSLSKLEEVTEVSKSMLGQIERGT SNPTVKTLWKIAKGLNVSFSTFIEEESSEVSIVSPADTKPLIEDDSNYLVYPLFSFEQ KKRFEIYNIELKPNHNHQAEAHFPGVEEYIIVSKGTLELIIAGQTYQVPTESTIHFPA DKSHTYCNNTESIVKAYVLVYYPV" misc_feature complement(1213282..1213437) /locus_tag="Acear_1128" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cd00093" /db_xref="CDD:28977" misc_feature complement(order(1213336..1213338,1213411..1213413, 1213423..1213425)) /locus_tag="Acear_1128" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28977" misc_feature complement(order(1213339..1213341,1213414..1213416)) /locus_tag="Acear_1128" /note="salt bridge; other site" /db_xref="CDD:28977" misc_feature complement(order(1213333..1213338,1213348..1213350, 1213357..1213359,1213390..1213395)) /locus_tag="Acear_1128" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28977" misc_feature complement(1212910..1213215) /locus_tag="Acear_1128" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene 1213662..1214408 /locus_tag="Acear_1129" /db_xref="GeneID:9513171" CDS 1213662..1214408 /locus_tag="Acear_1129" /note="COGs: COG1296 branched-chain amino acid permease (azaleucine resistance); InterPro IPR011606; KEGG: mmz:MmarC7_1603 AzlC family protein; PFAM: AzlC family protein; SPTR: A6VJN5 AzlC family protein; PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC" /codon_start=1 /transl_table=11 /product="AzlC family protein" /protein_id="YP_003827716.1" /db_xref="GI:302391896" /db_xref="GeneID:9513171" /translation="MSESRSKAIVEENSVEELSFTAGIKEGIPIALGYIPIAITFGLV AESAGINKQISILMSLLVFAGASQFVAVNLLAVGSGVGEVILTTFIVNLRHLLMAASI SQRFRDNVSKGWRALLAFGITDETFSLASLRSEEKLSTSFMLGLNLISYLSWVAGTGI GVFVGAELPSAIQASMGIALYAMFIGLLVPSLQKSYSVVGVVIFAVVINSLLNWLSVF SSISDGWKIVITTILAAFLGAVLFPKEESN" misc_feature 1213743..1214168 /locus_tag="Acear_1129" /note="AzlC protein; Region: AzlC; cl00570" /db_xref="CDD:193874" gene 1214408..1214707 /locus_tag="Acear_1130" /db_xref="GeneID:9513172" CDS 1214408..1214707 /locus_tag="Acear_1130" /note="InterPro IPR008407; KEGG: hor:Hore_01820 branched-chain amino acid transport; PFAM: branched-chain amino acid transport; SPTR: B8D0X5 Branched-chain amino acid transport; PFAM: Branched-chain amino acid transport protein (AzlD)" /codon_start=1 /transl_table=11 /product="branched-chain amino acid transport" /protein_id="YP_003827717.1" /db_xref="GI:302391897" /db_xref="GeneID:9513172" /translation="MDRLLLVVVGMAVVTYIPRMLPMVLLQEMELSPFMNRFLEFIPY AALSALIFPGILSSTNSTVSAVIGGSVAVVLAYFRLNLLLIVISSIISVFLVGLI" misc_feature 1214417..>1214584 /locus_tag="Acear_1130" /note="Branched-chain amino acid transport protein (AzlD); Region: AzlD; cl00735" /db_xref="CDD:193920" gene 1216048..1216302 /locus_tag="Acear_1131" /db_xref="GeneID:9513173" CDS 1216048..1216302 /locus_tag="Acear_1131" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827718.1" /db_xref="GI:302391898" /db_xref="GeneID:9513173" /translation="MGYCKKNTFKNQLKEQIGEFIVVLIKSGVDCCKKKGVLCGIEED FLVIMNDDSKMEISLKAIVAIKKSISGTKQNNYFDEYCYE" gene 1216318..1217034 /locus_tag="Acear_1132" /db_xref="GeneID:9513174" CDS 1216318..1217034 /locus_tag="Acear_1132" /note="KEGG: viral A-type inclusion protein; SPTR: A2ERL6 Viral A-type inclusion protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827719.1" /db_xref="GI:302391899" /db_xref="GeneID:9513174" /translation="MEETNESFPTDIEEIASVIENLDFTGEEIEFLLKKLEDLKNNNS VDQYSEELANFLINQLNKLKQTQEEDEISEEESIHLEGFGSDNGLNASDLRSLLQNKV EEFVVINLIMGGEYCQIEGVLCNVGANFITLIYQNQIIYIKIESIAAIERKMNNYSKP DDLQKNKRIKTYKDQYYMDETIENVQLDESKEDNENNTSQKSKEKCIECQSETKPLNS HNRGQKIKKEQKSYTEVNEE" gene complement(1217101..1217571) /locus_tag="Acear_1133" /db_xref="GeneID:9513175" CDS complement(1217101..1217571) /locus_tag="Acear_1133" /note="KEGG: ate:Athe_2271 hypothetical protein; SPTR: B9MMP4 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827720.1" /db_xref="GI:302391900" /db_xref="GeneID:9513175" /translation="MEEKPEQDNLFELVSVEDDFQHLPSKAICKEIIKEKTLTIPKQK PKVEQLSKTLIKPSITSHKTICTPEGFKVIIQGKVTEKVFYVADKPEQSVHAAKFCFP FCTFIKLPKKTNIKDIKVKAEDVIIQLIDQKKINKCVLLCICAIPEKNIKHCDC" misc_feature complement(1217179..1217439) /locus_tag="Acear_1133" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" gene 1217739..1218260 /locus_tag="Acear_1134" /db_xref="GeneID:9513176" CDS 1217739..1218260 /locus_tag="Acear_1134" /note="KEGG: bbe:BBR47_57840 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827721.1" /db_xref="GI:302391901" /db_xref="GeneID:9513176" /translation="MSDLQRSSQEEALVDIVESIVSKQNSVGYFINAEVEKIQSFSDQ SDTSLDEIIDFHTEVASNIKNTMKLQMLLQFKLEEILEKKNWISQKAGETKAKKSKVL IDLLEAVIFVESVIENFLQIELKVRKKVVQKYNFLPNKVNDFMRIMDLIINNGKRIQK ELEFEIKMLENYL" gene 1218279..1218602 /locus_tag="Acear_1135" /db_xref="GeneID:9513177" CDS 1218279..1218602 /locus_tag="Acear_1135" /note="KEGG: afl:Aflv_1237 hypothetical protein; SPTR: C2NRU7 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827722.1" /db_xref="GI:302391902" /db_xref="GeneID:9513177" /translation="MSMPELPEGKDFKDALVDLLESIALEEVSLAHFVNAEAEKIQKV AKSKKITPEEMIKFQKNISKTMRSTIKKEMLLQFKLEDILDFKGKGKKDNSCGGGDDD PCKEY" gene 1218765..1219061 /locus_tag="Acear_1136" /db_xref="GeneID:9513178" CDS 1218765..1219061 /locus_tag="Acear_1136" /note="KEGG: afl:Aflv_1237 hypothetical protein; SPTR: Q8KNV8 Putative uncharacterized protein pBt030" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827723.1" /db_xref="GI:302391903" /db_xref="GeneID:9513178" /translation="MEPDLPDPNGDFTQPEALTQLLLSIALEEVSLAHVENAEGEKIQ AIVDAFEAGDIGFQQTLDLQDSVNDTLKTTIKKQMLLQFKLEDVLDFKGELELP" gene 1219371..1219781 /locus_tag="Acear_1137" /db_xref="GeneID:9513179" CDS 1219371..1219781 /locus_tag="Acear_1137" /note="KEGG: afl:Aflv_1237 hypothetical protein; SPTR: Q8KNV8 Putative uncharacterized protein pBt030" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827724.1" /db_xref="GI:302391904" /db_xref="GeneID:9513179" /translation="MEPDLPDPNGDFTQPEALTQLLLSIALEEVSLAHVENAEGEKIQ AIVDAFEAGDIGFQQTLDLQDSVNDTLKTTIKKQMLLQFKLEDVLDFKEREPRVIQNT ATITATFNDESVTAQDIAFYNTNTTTSIQEVSKS" gene 1219778..1222687 /locus_tag="Acear_1138" /db_xref="GeneID:9513180" CDS 1219778..1222687 /locus_tag="Acear_1138" /note="InterPro IPR001434; KEGG: gme:Gmet_2043 hypothetical protein; SPTR: Q39U02 Putative uncharacterized protein; TIGRFAM: hypothetical protein; TIGRFAM: conserved repeat domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827725.1" /db_xref="GI:302391905" /db_xref="GeneID:9513180" /translation="MTVIGGIDLGNLTDYLFFFADGSTDANWQGATKGFVGDVAVDGI QASEGTSGSVPYAGTISTNDATLGAWQDIVDQNDPPEVDPAQAFASTNNGALITGLES DLANAFTQINALTANPGDLPAPFDTNFDGTIQSLDGLDTQNGTDEVFVLDITSNFSGI STQISITGDAGDVFIFRWDTDGDPSNGYQGQVKFQSGGAIVPGGGLVPSNFINVAGDI NASGGGSTPPPPYPQGPRFDDGTGSSIVNGSDFSGGGFFTGYWLTTGDPTNGETQSLS NGIFVGGWYTTTTKFSMTSGTSGVYVSPNEATLTNPNIDVEKEVSNDNGTTWFDADDP PGPNVVQGTAPQFRFTVTNTGNVTLTNVVVSDDVFGQIATIPSLAPGESQQFIQVGTW VLGQQVNTATATGDFDGQTVSDTDPAHWVGVEAPTAAIDVEKEVSPDNGATWFDADNP PGPDVVNPTNPQFRFTVTNTGNVTLTNVEVTDDVFGQIATIPSLAPGASQQFIVNGTW AQGQQVNTATATGDFDGQTVSDTDPAYWVGVEAQVPAIDVEKEVSNDNGTTWFDADNP PGPDVVQGTNPQFRFTVTNTGNVTLSNVQITDDVSGLIATIPSLAPGASQQFIVNGTW ALGQQVNTATTTGDFDGATVSDTDPAHWVGVEAPTPDIDVVKEVSPDNGTNWFDADNP PGPEVVNPTNPQFRFTVTNTGNVTLTNVEVTDDVFGQIATIPSLAPGASQQFIVNGTW ASGQQVNTATATGEFDGQTVSDTDPAHWVGVEEAVPSIDVVKEVSPDNGATWFDADNP PGPNVINPTNPQFRFTVINTGNVTLSNVQVTDDVFGLIAVIPSLAAGASQQFIQVGTW APGQQMNTATATGEFDGQTVTDTDPANWFGADIAIDIVKEVSVDNGATWIDANTSPGP TLPEGVTPQFRYTVTNTGNVSLTNLTLEDSNLGNIPIPAGNDPLDPGQSFSVIAP" gene complement(1222970..1223149) /locus_tag="Acear_1139" /db_xref="GeneID:9513181" CDS complement(1222970..1223149) /locus_tag="Acear_1139" /note="KEGG: viral A-type inclusion protein" /codon_start=1 /transl_table=11 /product="viral A-type inclusion protein" /protein_id="YP_003827726.1" /db_xref="GI:302391906" /db_xref="GeneID:9513181" /translation="MTKDKNEQPEMKNIKNKKDDEENRLEELNEEFDDRNMESVTEGD EDLEDEEIDNIDLGG" gene 1223442..1224200 /locus_tag="Acear_1140" /db_xref="GeneID:9513182" CDS 1223442..1224200 /locus_tag="Acear_1140" /note="KEGG: hor:Hore_08460 hypothetical protein; SPTR: B8CWD4 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827727.1" /db_xref="GI:302391907" /db_xref="GeneID:9513182" /translation="MKNRLIISLILIGLLFGIITFTTAANLNGDEVLTKIKEANNAKS VKLTAKMESYDANGDKMEHKLKWISKNGRVDKSLIRLLAPANLKDTAFLTKNKNNSRD MYLYLSELESSTKLTGRQQNSSFLETNFSYRDLATLNDQDYKQDYRAIILRENSQEFL LQIIPIEADINYNYGKMWVAKKNWYPVKIEFYNEEGKLYKVLRNKKLKKINGYWRAQQ IVMENHQTGSKSILYVDKIDYDQRIDDKLFQVNN" gene 1224279..1225700 /locus_tag="Acear_1141" /db_xref="GeneID:9513183" CDS 1224279..1225700 /locus_tag="Acear_1141" /note="InterPro IPR000184; KEGG: swp:swp_0720 hypothetical protein; PFAM: surface antigen (D15); SPTR: B8CIR0 Putative uncharacterized protein; PFAM: Surface antigen" /codon_start=1 /transl_table=11 /product="surface antigen (D15)" /protein_id="YP_003827728.1" /db_xref="GI:302391908" /db_xref="GeneID:9513183" /translation="MKKYIKCFTVLIIVVLLNLIFMGGAYGTEAEAESKSDVKVVKDK SFFGEMVNKVKGYYTIDEETEEKHVPFVYYVNEAGLMVGDFYYNTDLFDNQTKLISAS MYSPTKETFTSFTNVKDYPLSDKCSLGGDLKIIKYNEIKNSALGNDSSDEEIPESTLD VIDSFKDLSPTSQQRVEDALIATLDDSDDIDPKESLETDKEEKVYSSLLNEAQTNGDK MDGYQLYHGWNNSITIDLTYKINETNDIVTAYTYEELESQVTDYKSDTISLAWENEEI DRKNNPRQGHKLITKVEKSLDWLGHDSENSWDYTKYTLDARKYLPVFEESTLAFRFRT QSTTGEEVKDQERTFLNMLSGDSNPEVTTYAPFFDMSLLGDLNTMKGYNYYRFYDNNS VLYQTELRFPLDNILPRLQGNIFAEAGRVSSDFDQELFTEDMHYSGGFGVRYFFNQDV VVRTDVGFSDEGTKMRMNIGQTF" misc_feature <1224939..1225610 /locus_tag="Acear_1141" /note="Surface antigen; Region: Bac_surface_Ag; cl03097" /db_xref="CDD:155280" gene 1225922..1228051 /locus_tag="Acear_1142" /db_xref="GeneID:9513184" CDS 1225922..1228051 /locus_tag="Acear_1142" /note="COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731:IPR003392:IPR001036; KEGG: hor:Hore_08450 efflux transporter, , hydrophobe/amphiphile efflux-3 (HAE3) family; PFAM: patched family protein; SPTR: B8CWD3 Efflux transporter, , hydrophobe/amphiphile efflux-3 (HAE3) family; PFAM: MMPL family" /codon_start=1 /transl_table=11 /product="patched family protein" /protein_id="YP_003827729.1" /db_xref="GI:302391909" /db_xref="GeneID:9513184" /translation="MPARVKLDKIKEIFGGTEFIIISLTADDVLNLSTLKKVKKLEEN LKELKQIKKVKSPFSMHSITGKNNNLIIDDLIKKIPETTSKKQQLRQKIKNNNLVYGN LIAKDFKAVAVVGYLQKDSDDQLLLKKLNKIIDKSSEDERIYLAGMPVIRAKIASNII YDIKRFMPSGLLIVLVFLYLCFKQLRGIILPFIVAVMSIIVSIGLASLLNWKIHLITV ILPVALMAITNDYGIHIIAYYQEENYQQRSINEVELSRLVVRNLSRPIIATGITTIIG LLCLLAHIIVPAQQLGVLAAVGIGFALLASILFMPAVLSLLSKPKPVKITEKNNNSRS MEKMLFGISDFVTSYPKKIITAFLLVIILVSSGICLLKVDTNPINYFSRNSQIVKSNN IINKYFGGTSTISIVAKGDIEDPAVMKKIAKLEERLKEYKKVDQVTAISNVMRNINLE LHNKNEKFARVPTTRNAISQYFLLYSMSEESTELVDFERRHALIRARIKTNSTTEINK IVDSINKNIDNSNQSSFVFIGGIGDLLAELVDSVVKGQVFSLTLSVISVALIVIYLFS SLTAGVIAILPLTLAIVTLFGLMGYFGIELNMITALLSSIMIGVGVDYTIHFLWRYRK EKKNRDSKAAVKKTLMTTGRGIIFNALSVIVGFVILLGSNFLPVKFFGFLVIISISGC LIGSLILLPAVCIIFEPEFLESSIADS" misc_feature <1226339..1228024 /locus_tag="Acear_1142" /note="Predicted exporters of the RND superfamily [General function prediction only]; Region: COG1033" /db_xref="CDD:31236" misc_feature <1227653..1227931 /locus_tag="Acear_1142" /note="Protein of unknown function (DUF1129); Region: DUF1129; cl11555" /db_xref="CDD:159539" gene complement(1228074..1228655) /locus_tag="Acear_1143" /db_xref="GeneID:9513185" CDS complement(1228074..1228655) /locus_tag="Acear_1143" /note="InterPro IPR013216; KEGG: cbi:CLJ_B2296 methyltransferase type 11; PFAM: methyltransferase type 11; SPTR: C3KY90 Putative methyltransferase type 11; PFAM: methyltransferase domain" /codon_start=1 /transl_table=11 /product="methyltransferase type 11" /protein_id="YP_003827730.1" /db_xref="GI:302391910" /db_xref="GeneID:9513185" /translation="MQLPPKLYNWLVRPEWLTNIYINDLLKENFILKNKDVLDFGCGI GSTSSIFNPEDYLGIDPDQERIKYAQQLYSDYDFQTLDKSKLDFEANSFDYILMIAVL HHIPSDELRDILQQFHQILKSTGKIIVIEPCFFSNSYLNNYFMKIMDNGDYIRNPNQY FKLFQNQYYKVNPIAKYKKMILYNELFFFAIPA" misc_feature complement(1228266..1228550) /locus_tag="Acear_1143" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(1228359..1228361,1228407..1228415, 1228473..1228478,1228518..1228538)) /locus_tag="Acear_1143" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 1228954..1229199 /locus_tag="Acear_1144" /db_xref="GeneID:9513186" CDS 1228954..1229199 /locus_tag="Acear_1144" /note="InterPro IPR005370; KEGG: hor:Hore_00370 uncharacterized protein family (UPF0180); PFAM: protein of unknown function UPF0180; SPTR: B8D044 Uncharacterized protein family (UPF0180); PFAM: Uncharacterised protein family (UPF0180)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827731.1" /db_xref="GI:302391911" /db_xref="GeneID:9513186" /translation="MARKISVAVEDDLSNVSQELERRGYEVMDLEEDNLQKVDAIVIS GEDKNVMNMSDIKNEASVINADGLSAVEVSEELQNRI" misc_feature 1228972..1229196 /locus_tag="Acear_1144" /note="Uncharacterised protein family (UPF0180); Region: UPF0180; cl04214" /db_xref="CDD:186621" gene 1229214..1229471 /locus_tag="Acear_1145" /db_xref="GeneID:9513187" CDS 1229214..1229471 /locus_tag="Acear_1145" /note="KEGG: hor:Hore_02350 hypothetical protein; SPTR: B8D127 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827732.1" /db_xref="GI:302391912" /db_xref="GeneID:9513187" /translation="MKTSNVMAILIDKRTNSAPKVQEILTTYGSIIETRLGIHETDDS QEEGLILLVLRDDKEEISNLADELKEVTGVKVNTMELKFHE" misc_feature 1229229..1229450 /locus_tag="Acear_1145" /note="putative iron-only hydrogenase system regulator; Region: hyd_TM1266; TIGR03959" /db_xref="CDD:188474" gene 1229744..1230940 /locus_tag="Acear_1146" /db_xref="GeneID:9513188" CDS 1229744..1230940 /locus_tag="Acear_1146" /EC_number="2.5.1.49" /note="COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterProIPR006235:IPR000277:IPR000209:IPR015424:IPR 015421:IPR015422; KEGG: hor:Hore_19570 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; PRIAM: O-acetylhomoserine aminocarboxypropyltransferase; SPTR: B8CZI5 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: methionine gamma-lyase; OAH/OAS sulfhydrylase; O-succinylhomoserine sulfhydrylase" /codon_start=1 /transl_table=11 /product="O-acetylhomoserine sulfhydrolase" /protein_id="YP_003827733.1" /db_xref="GI:302391913" /db_xref="GeneID:9513188" /translation="MTEEKKEKLGFDTLSVHAGYEPEPTTGSRAVPIYQTTSYVFDDA EHAANLFAQEEEGNIYTRLSNPTNAVFEKRVAALEGGEAGLAIASGMAAINLTVLTLL EAGDEIVASRSIYGGTFHLFTETLPKYEIETTFVAPDDLAEWEAAITEDTKIIYLESP GNPLLDLVDIEAVAEIAHKHDIKVVVDNTFNTPYLSQPLSLGADIVLHSATKYIGGHG SSIGGIVVGPKDLIDQMRSEGYRDTGPALSPMNSWLFIQGLETLSLRMEKHCENAQKI AEWLEEHPKVDWVRYPGLESHPHHELAKKQQRSFGGMICFEVKGGLEAGKQLINNVKL CSLLANIGDTRTLIIHPASTTHEQLSKEDQQAAGITEGLIRLSVGIENVEDIIADLKQ AFSKLD" misc_feature 1229771..1230925 /locus_tag="Acear_1146" /note="OAH/OAS sulfhydrylase; Region: OAH_OAS_sulfhy; TIGR01326" /db_xref="CDD:130393" misc_feature 1229822..1230928 /locus_tag="Acear_1146" /note="CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of...; Region: CGS_like; cd00614" /db_xref="CDD:99738" misc_feature order(1229846..1229857,1229861..1229866,1229921..1229923, 1229927..1229929,1230005..1230010,1230014..1230019, 1230086..1230088,1230101..1230103,1230110..1230112, 1230374..1230376,1230398..1230400,1230404..1230406, 1230452..1230454,1230485..1230487,1230491..1230496, 1230731..1230733) /locus_tag="Acear_1146" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99738" misc_feature order(1230008..1230016,1230086..1230088,1230215..1230217, 1230302..1230304,1230368..1230370,1230374..1230379, 1230404..1230406) /locus_tag="Acear_1146" /note="substrate-cofactor binding pocket; other site" /db_xref="CDD:99738" misc_feature order(1230008..1230016,1230086..1230088,1230302..1230304, 1230311..1230313,1230368..1230370,1230374..1230379) /locus_tag="Acear_1146" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99738" misc_feature 1230377..1230379 /locus_tag="Acear_1146" /note="catalytic residue [active]" /db_xref="CDD:99738" gene 1230972..1232108 /locus_tag="Acear_1147" /db_xref="GeneID:9513189" CDS 1230972..1232108 /locus_tag="Acear_1147" /EC_number="2.3.1.31" /note="COGs: COG2021 Homoserine acetyltransferase; InterPro IPR006296:IPR008220:IPR000073; KEGG: hor:Hore_19560 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; PRIAM: Homoserine O-acetyltransferase; SPTR: B8CZI4 Homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase" /codon_start=1 /transl_table=11 /product="homoserine O-acetyltransferase" /protein_id="YP_003827734.1" /db_xref="GI:302391914" /db_xref="GeneID:9513189" /translation="MSIPSKRLNSVNSVGLVKTKELTLFEEEEFYFESGAKLSPIDVA YETYGTLNSKKDNVVLICHPLTASAHAAGWYTKDDKRPGLWDPLIGPGKAIDTNQYYV ICSNILGGCYGTTGPASINPETGKEYGLNFPVVTIKDMVNLQKALLDRLGIKQLAAVI GGSMGGMQVLRWAVEYPDFVEKIIPIATSGRLKARTMAYNQLAIDAIKNDPDWQNGDY YDSNRKPTKGMALARKIGMITYRTSEAFQSEFGRDRIEDKDFYSLDNQFQINSYLDYQ GEKFMNRFDANSFIYLTKAMDLFDLSRDYKSFEAALSKIEAENLLITIDSDKLFPPEE SMEIVEGIQKVGGKIKHHQINSEVGHDSFLIEFNKLDDPIRNFL" misc_feature 1231065..1232105 /locus_tag="Acear_1147" /note="Homoserine acetyltransferase [Amino acid transport and metabolism]; Region: MET2; COG2021" /db_xref="CDD:32204" misc_feature 1231068..1232105 /locus_tag="Acear_1147" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" gene complement(1232279..1233268) /locus_tag="Acear_1148" /db_xref="GeneID:9513190" CDS complement(1232279..1233268) /locus_tag="Acear_1148" /note="COGs: COG0309 Hydrogenase maturation factor; InterPro IPR011854:IPR010918:IPR016188:IPR000728; KEGG: hor:Hore_21270 AIR synthase related protein domain protein; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; SPTR: C5VP17 Hydrogenase maturation factor; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain" /codon_start=1 /transl_table=11 /product="AIR synthase related protein" /protein_id="YP_003827735.1" /db_xref="GI:302391915" /db_xref="GeneID:9513190" /translation="MKAGKLNINNLKSLILDQISATNQDVLVKPNIGEDSAVIDFGEF VAVISTDPITGVQEGMGSLAVNVACNDIAANGAEPIGIQQTLLVPPETTEDEIIAITR DINQGAKELGIDILGGHTEITDIVNKPLVSCTAIGKTTKEKFVTSSGAEIGDDIIVTK WTGLEGASILAVDYYNKLLELGVGKETLATAKNFGNQISVLPEGLIGAEFGVNAMHDV TEGGLYGSLYELTEAAETGFMIDQQKVPLHPATESIIEALELNPYQLIGSGMMILTTS RGEELIKELTKEDIPAAIVGEITESQRIIRTDTEEIELEEAPQDELWQFLADN" misc_feature complement(1232375..1233217) /locus_tag="Acear_1148" /note="AIR synthase (PurM) related protein, subgroup 1 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two...; Region: PurM-like1; cd06061" /db_xref="CDD:100037" misc_feature complement(1232300..1233205) /locus_tag="Acear_1148" /note="Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]; Region: HypE; COG0309" /db_xref="CDD:30657" misc_feature complement(order(1232582..1232584,1232861..1232863, 1232873..1232878,1232912..1232914,1233008..1233010, 1233017..1233019,1233026..1233028,1233056..1233058, 1233113..1233115,1233119..1233121,1233125..1233136)) /locus_tag="Acear_1148" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100037" misc_feature complement(order(1232912..1232920,1233056..1233058)) /locus_tag="Acear_1148" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:100037" gene complement(1233295..1233810) /locus_tag="Acear_1149" /db_xref="GeneID:9513191" CDS complement(1233295..1233810) /locus_tag="Acear_1149" /note="COGs: COG4720 membrane protein; InterPro IPR009825; KEGG: amt:Amet_3693 hypothetical protein; PFAM: protein of unknown function DUF1393; SPTR: A6TUE5 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1393)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827736.1" /db_xref="GI:302391916" /db_xref="GeneID:9513191" /translation="MNKTKELSLNGILIALVAIATMAIKVPVPATEGYIHLGDSMIYL ASILFGWKTGLIAGGLGSALADLFSGYAHWAFPTLIIKGLEGLIIGKIVHQTARNTSL RIKDIIAAFIGGGWMVLGYYLAGAVLTNSLIVPLSSIPWNIIQAVGGAIIVFPIIFAI IKSNILDYLNN" misc_feature complement(1233373..1233810) /locus_tag="Acear_1149" /note="Protein of unknown function (DUF1393); Region: DUF1393; cl01942" /db_xref="CDD:194214" gene 1234009..1235475 /locus_tag="Acear_1150" /db_xref="GeneID:9513192" CDS 1234009..1235475 /locus_tag="Acear_1150" /note="COGs: COG3552 protein containing von Willebrand factor type A (vWA) domain; InterPro IPR008912; KEGG: dae:Dtox_0807 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SPTR: C1TCM7 protein containing von Willebrand factor type A (VWA) domain; PFAM: VWA domain containing CoxE-like protein" /codon_start=1 /transl_table=11 /product="VWA containing CoxE family protein" /protein_id="YP_003827737.1" /db_xref="GI:302391917" /db_xref="GeneID:9513192" /translation="MDIKMLTDEFEQFVEENKGNSTDNYIENNIIKFIQILRGLGFNI SLVESIEAVDSLKTIDILNKKEFKLTLQALLVKNYEERKIYNQVFELFFTSEGLKNEK ESVFVEDKDEISEDDEVIHDPIDRKDKEDNDSDDEDDEEWEIEIDNLDQEQQELYEEL DPEVKEKVNEQVRDKFGETLLQASKTDSMVKNFIQGSLQYWKAKLNQNRQGIIDLDST IDVRKTGDREVDSKLRSIVNKLDDESEFILAKDIKEIAEENLEETMEVIKRLSRKLAT KFSRRQKKKNKSRKIDIRSTLRKNIKYGGTLVELSYQQRRRQKPRFLLICDVSDSMAK YSTFILQFIYGFSDVIKEIESFIFSEDLERITDYFEDNKSFGAKMSEIIGDSKEWSGA TNLNQALETFNQEYESLLTSRTVVFIVSDTKTLGLEEAVQKVKSIKSKVKDIIWLNTL PKSAWENRDSVKLFKNHCQMFKCNRLKDMQQIIKKKLL" misc_feature 1234084..>1234371 /locus_tag="Acear_1150" /note="Protein containing von Willebrand factor type A (vWA) domain [General function prediction only]; Region: CoxE; COG3552" /db_xref="CDD:33354" misc_feature 1234894..1235373 /locus_tag="Acear_1150" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cl00057" /db_xref="CDD:197401" gene 1235558..1235833 /locus_tag="Acear_1151" /db_xref="GeneID:9513193" CDS 1235558..1235833 /locus_tag="Acear_1151" /note="InterPro IPR011437; KEGG: hor:Hore_07510 hypothetical protein; PFAM: protein of unknown function DUF1540; SPTR: B8CW39 Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1540)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827738.1" /db_xref="GI:302391918" /db_xref="GeneID:9513193" /translation="MGPKSHVHCTVENCKWFEEPNLCVAEKILITSDDFSKELPNEMD VEETNQIVNQKGLSPITECYQSNCKTFVPEDKYDQGLGGTNPNNPDQ" gene 1236117..1236938 /locus_tag="Acear_1152" /db_xref="GeneID:9513194" CDS 1236117..1236938 /locus_tag="Acear_1152" /note="COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR014284:IPR000943:IPR013325:IPR013324:IPR 007627:IPR007624:IPR007630:IPR011991; KEGG: hor:Hore_12400 RNA polymerase, sigma 70 subunit, RpoD family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: B8CXH1 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 70 subunit, RpoD" /protein_id="YP_003827739.1" /db_xref="GI:302391919" /db_xref="GeneID:9513194" /translation="MSINQYYQEMGHDLLSKKEEAKLAKGAQNGDQEARKELIEHNLR LVVSIAKKYRGKGMEFEDMIQEGNLGLMKAIDKFDPDKGYRFSTYATWWIRQSITRAL PEAKTIRVPVHVWEKTTKVFKAKEKLYNQLNREPTFEEISEETGIDSEKVKEIIRISS DQNLASLNNLVGDDENTELGELIADDDVEEPMTDLNRQFLQEDLEEVLEELTDREAEI IRLRFGLKDNWPKTLQEVADRFKLSRERIRQIQEKALRRLRHPSRSKALKAYIAG" misc_feature 1236216..1236929 /locus_tag="Acear_1152" /note="RNA polymerase sigma factor RpoD, C-terminal domain; Region: RpoD_Cterm; TIGR02393" /db_xref="CDD:162836" misc_feature 1236228..1236422 /locus_tag="Acear_1152" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature 1236462..1236689 /locus_tag="Acear_1152" /note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539" /db_xref="CDD:146934" misc_feature <1236768..1236896 /locus_tag="Acear_1152" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cl01055" /db_xref="CDD:197420" gene 1237143..1237487 /locus_tag="Acear_1153" /db_xref="GeneID:9513195" CDS 1237143..1237487 /locus_tag="Acear_1153" /note="InterPro IPR012427; KEGG: taf:THA_1719 hypothetical protein; PFAM: protein of unknown function DUF1622; SPTR: B7IDS8 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1622)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827740.1" /db_xref="GI:302391920" /db_xref="GeneID:9513195" /translation="MIRMQDLIITLSEYISYLAQLFAIIIIAHGIIVVFWINLNNVFT KEDAVDVMKRSRTKLGYSFSVGLGILIGSSILRSVVAPTWNDIGQLAAIIGIRTALNY FLNRDLGAILNN" misc_feature <1237299..1237466 /locus_tag="Acear_1153" /note="Protein of unknown function (DUF1622); Region: DUF1622; cl01991" /db_xref="CDD:154697" gene 1237630..1238982 /locus_tag="Acear_1154" /db_xref="GeneID:9513196" CDS 1237630..1238982 /locus_tag="Acear_1154" /note="COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005839:IPR006463:IPR006638:IPR002792:IPR 013848:IPR007197:IPR013785; KEGG: hor:Hore_11680 RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: B8CX99 RNA modification enzyme, MiaB family; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: TRAM domain; radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family" /codon_start=1 /transl_table=11 /product="tRNA-i(6)A37 thiotransferase enzyme MiaB" /protein_id="YP_003827741.1" /db_xref="GI:302391921" /db_xref="GeneID:9513196" /translation="MNEEEKKEEDIEGLAVIETYGCQMNEHDSEKLAGVLKEKGYKLI EDTEKADVIILNTCCIRENAEVKVHGKIGYLKQYKRENPDLIIGICGCMMQQEGMAEK IKDKHPHVDIVFGTHNIHEFSQLLDAAEEESETIIDIWGEKEELIPDLPTRRETDHKA WVTIIYGCNNFCTYCIVPYVRGREKSRSSIDIVDEIKELADDGVKEVTLLGQNVNSYG YDLDRKIDFADLLEELDQIEGIERIRYMTSHPRDFTTKLIKTIADSNKVCEHFHLPIQ SGSSRILEKMNRGYTQEEYLALVEEIRSYIPQAAITTDFIVGFPGERDEDFAETLKLV EEVEFDMAYTFKYSQRSGTPAAEMEGQIEEDVKQKRLQKLMDIQSDISAQKNKKLLGK TVKVLGDGESKNNPERQTGRTRTNKIVVFNSDKDLTGKLINVKINKASSWTLTGDLVK " misc_feature 1237678..1238979 /locus_tag="Acear_1154" /note="(dimethylallyl)adenosine tRNA methylthiotransferase; Provisional; Region: PRK14328" /db_xref="CDD:184625" misc_feature 1237678..1237974 /locus_tag="Acear_1154" /note="Uncharacterized protein family UPF0004; Region: UPF0004; pfam00919" /db_xref="CDD:189770" misc_feature 1238113..1238667 /locus_tag="Acear_1154" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature order(1238131..1238133,1238137..1238139,1238143..1238145, 1238149..1238157,1238257..1238259,1238263..1238268, 1238368..1238376,1238449..1238451,1238575..1238577) /locus_tag="Acear_1154" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" gene 1239054..1239425 /locus_tag="Acear_1155" /db_xref="GeneID:9513197" CDS 1239054..1239425 /locus_tag="Acear_1155" /note="COGs: COG3679 conserved hypothetical protein; InterPro IPR009763:IPR010368; KEGG: hor:Hore_15270 hypothetical protein; PFAM: protein of unknown function DUF964; protein of unknown function DUF1333; SPTR: B8CYA7 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF964)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827742.1" /db_xref="GI:302391922" /db_xref="GeneID:9513197" /translation="MSIMDKAEELGDEILESSEYNELKDAEEAVESDETAKSLLDEFQ AAQKRLQMAQANGQEVTQEQQQEIQSIQAKMQENEKIKEFMEAQQNFNKIMQTVNQVI TSALQGEEAAAEDECPSGCSC" misc_feature 1239060..1239380 /locus_tag="Acear_1155" /note="Protein of unknown function (DUF964); Region: DUF964; cl01483" /db_xref="CDD:194147" gene 1239584..1242265 /locus_tag="Acear_1156" /db_xref="GeneID:9513198" CDS 1239584..1242265 /locus_tag="Acear_1156" /note="COGs: COG0249 Mismatch repair ATPase (MutS family); InterProIPR005748:IPR007696:IPR000432:IPR016151:IPR 007860:IPR007695:IPR007861; KEGG: hor:Hore_11670 DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SPTR: B8CX98 DNA mismatch repair protein mutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS" /codon_start=1 /transl_table=11 /product="DNA mismatch repair protein MutS" /protein_id="YP_003827743.1" /db_xref="GI:302391923" /db_xref="GeneID:9513198" /translation="MAKELTPMMQQYFSIKDEYDDAILLFRLGDFYEMFADDAELAAR ELELTLTSRNKGKGKKTPMAGIPYHSAESYIATLIDKGYRVAICEQVEDPSETNGLVK REVVRVITPGTVIDNEMLDDKNNNYLSAVVANEEGFGIATIDISTGDFSTTELTGEEA QSNLIDELARINPAECLVDTNLYEKTEVITYINQQLDPIINEIKERFNYSQAYDLLID HFEVNSLDGFGCEDLKFAVTAAGAVLDFLIETQKRTLGHLNQLTTYSTKDYMTLDANT RRNLELTKTIRDQSYKGSLLWVLDQTVTAMGGRKLQKWLEQPLLDVEGINNRLDAVGE LKDNIFLKEELKDNLTEVYDLERLMSKITYGSANARDLIALKTSIANLPAIKELLTQF ESSKLKSAADKLDTLEDVHELIESSIKEEPPTTVTEGDIIKTGYDEELDEFRQAMNEG KDWIANLEKEEKERTGIKSLKVGFNKVHGYYIEVTKANLDLVPDNYERKQTLSNSERY ITPELKEKESKILGAEEKSVELEYQLFTEIREKVAQETERVQKVADIVAQLDVLASLA EVAINNNYCHPEVNASDVIDIEDGRHPVVEEMLEEESFVPNDSYIDCDQDRFLIITGP NMSGKSTYMRQVALMVLMSQIGSFIPADEAKIGIVDRIFTRVGASDDLTTGQSTFMVE MNEVANILNNATQNSLVILDEVGRGTSTYDGLSIAWAVTEYISDQSNIGAKSLFATHY HELTELESKLPGVKNYNVAVKEEGSDITFLRKIVPGKANDSYGIEVAKRAGVPKSVID RANEVLEKLETEIDNYEQINNSLESEKVAEAKAEITSESELQQQNQLALFAAQNSELI QKLGELDIMSMTPLEAMNKLHQLQQEAREELKSQELA" misc_feature 1239584..1242238 /locus_tag="Acear_1156" /note="DNA mismatch repair protein MutS; Provisional; Region: PRK05399" /db_xref="CDD:180056" misc_feature 1239599..1239937 /locus_tag="Acear_1156" /note="MutS domain I; Region: MutS_I; pfam01624" /db_xref="CDD:144998" misc_feature 1239959..1240357 /locus_tag="Acear_1156" /note="MutS domain II; Region: MutS_II; pfam05188" /db_xref="CDD:147397" misc_feature 1240886..1241161 /locus_tag="Acear_1156" /note="MutS family domain IV; Region: MutS_IV; pfam05190" /db_xref="CDD:147399" misc_feature 1241339..1241995 /locus_tag="Acear_1156" /note="MutS1 homolog in eukaryotes. The MutS protein initiates DNA mismatch repair by recognizing mispaired and unpaired bases embedded in duplex DNA and activating endo- and exonucleases to remove the mismatch. Members of the MutS family possess C-terminal...; Region: ABC_MutS1; cd03284" /db_xref="CDD:73043" misc_feature 1241450..1241473 /locus_tag="Acear_1156" /note="Walker A/P-loop; other site" /db_xref="CDD:73043" misc_feature order(1241459..1241464,1241468..1241476,1241582..1241584, 1241687..1241692,1241798..1241800) /locus_tag="Acear_1156" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73043" misc_feature 1241573..1241584 /locus_tag="Acear_1156" /note="Q-loop/lid; other site" /db_xref="CDD:73043" misc_feature 1241597..1241638 /locus_tag="Acear_1156" /note="ABC transporter signature motif; other site" /db_xref="CDD:73043" misc_feature 1241675..1241692 /locus_tag="Acear_1156" /note="Walker B; other site" /db_xref="CDD:73043" misc_feature 1241699..1241710 /locus_tag="Acear_1156" /note="D-loop; other site" /db_xref="CDD:73043" misc_feature 1241786..1241806 /locus_tag="Acear_1156" /note="H-loop/switch region; other site" /db_xref="CDD:73043" gene 1242289..1244271 /locus_tag="Acear_1157" /db_xref="GeneID:9513199" CDS 1242289..1244271 /locus_tag="Acear_1157" /note="COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); InterProIPR014763:IPR014762:IPR003594:IPR020568:IPR 013507:IPR014790; KEGG: hor:Hore_11660 DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; SPTR: B8CX97 DNA mismatch repair protein mutL; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL C terminal dimerisation domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL" /codon_start=1 /transl_table=11 /product="DNA mismatch repair protein MutL" /protein_id="YP_003827744.1" /db_xref="GI:302391924" /db_xref="GeneID:9513199" /translation="MPKQIKKLPQEVVSKIAAGEVIERPASVVKELVENSIDADSDKI EIKVNNGGKDLIQVIDTGYGMTREDAELALERHATSKITEANDLFSIRSLGFRGEALP SIAAISRLTMKTRTEDKLGGTLVKINGGEIKKIEDAGCPIGTNIIVKDLFYNTPVRYK YLKTSATEIRRISDIVNRLALAYPEITFKLSHNQKKVLETPGNGNLMDTILSVYGKEV AKSMIAVDYEDKYMQVSGYVSKPNISRASKKHQSFFINRRYIKSRALSEAISKAYHTL LAKGRHPIAILTIKLNPVLVDVNVHPTKMEVNFSREKEVASVLQNGVKEALSNADLIP EVKLNSKDSTAVSKKDSQDSKQQQELELTKKRKFSSEKNKKKSQKKEKSTQKTTNDNQ DKSIQTDQINETKESSDRINRKESAEELKNGIEKQSKQADYFQKREQSNEKEKKNKES VAIKESQSDYNKDDATKSLSSFLPLGQIHNTYIIAQGEDGFYIVDQHAAHERILYNEL MEKFKQAEIKSQSLLMPVRLELTNPEIEILEENSEHLKNLGFEFEAFGGQTYLVRAVP NLLHKLDIKELCLDIIDNLLDKGKIQEPTEIIEDLLVIMSCRGAIKSGKSLVPGEMES LLQQLEESGNQHTCPHGRPTIIHFSKKELDKKFKRI" misc_feature 1242301..1244268 /locus_tag="Acear_1157" /note="DNA mismatch repair protein; Reviewed; Region: mutL; PRK00095" /db_xref="CDD:178860" misc_feature 1242361..>1242618 /locus_tag="Acear_1157" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(1242379..1242381,1242391..1242393,1242400..1242402, 1242460..1242462,1242466..1242468,1242472..1242474, 1242478..1242483,1242580..1242591) /locus_tag="Acear_1157" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 1242391..1242393 /locus_tag="Acear_1157" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(1242472..1242474,1242478..1242480,1242580..1242582, 1242586..1242588) /locus_tag="Acear_1157" /note="G-X-G motif; other site" /db_xref="CDD:28956" misc_feature 1242904..1243269 /locus_tag="Acear_1157" /note="MutL_Trans: transducer domain, having a ribosomal S5 domain 2-like fold, conserved in the C-terminal domain of DNA mismatch repair (MutL/MLH1/PMS2) family. This transducer domain is homologous to the second domain of the DNA gyrase B subunit, which is...; Region: MutL_Trans; cd00782" /db_xref="CDD:48466" misc_feature 1243198..1243200 /locus_tag="Acear_1157" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:48466" misc_feature 1243711..1244139 /locus_tag="Acear_1157" /note="MutL C terminal dimerisation domain; Region: MutL_C; cl07336" /db_xref="CDD:195534" gene 1244287..1245249 /locus_tag="Acear_1158" /db_xref="GeneID:9513200" CDS 1244287..1245249 /locus_tag="Acear_1158" /EC_number="2.5.1.75" /note="COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR018022:IPR002627; KEGG: hor:Hore_11650 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: B8CX96 tRNA Delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA)" /codon_start=1 /transl_table=11 /product="tRNA delta(2)-isopentenylpyrophosphate transferase" /protein_id="YP_003827745.1" /db_xref="GI:302391925" /db_xref="GeneID:9513200" /translation="MQEPLVAIIGPTAVGKTELSFTLAKELNAEIISGDSMQVYEGMD IGTAKPTVEERQGIPHHMIDILTPDQDFSVADFQERVDELIPEIVERGRLPMLVGGTG LYVKALIQGFIFPEMETDWDLRKQLEAEAEEHGTEYVHDKLKEIDPTLADKLHPNDLR RVIRGIEVYQQTGKTSTHFRQKAKERPPRYRAVKIGLKRDRDELYERINRRVDLMIDN GLIEEVKELYEAGYERGLTSMQGLGYKELIGYFEGEYDLEEAIRLIKRDTRHFAKKQL TWFRKDDEIHWFDVGEYEDEELVSDVEDVIKEKLSSEDMELITS" misc_feature 1244287..1245159 /locus_tag="Acear_1158" /note="IPP transferase; Region: IPPT; cl00403" /db_xref="CDD:197410" gene 1245374..1246306 /locus_tag="Acear_1159" /db_xref="GeneID:9513201" CDS 1245374..1246306 /locus_tag="Acear_1159" /note="COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959:IPR000641; KEGG: hor:Hore_11610 ATPase AAA; PFAM: ATPase AAA; SMART: AAA ATPase; SPTR: A1HMU5 AAA ATPase, central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: stage V sporulation protein K" /codon_start=1 /transl_table=11 /product="ATPase AAA" /protein_id="YP_003827746.1" /db_xref="GI:302391926" /db_xref="GeneID:9513201" /translation="MKKREIIEQIENGKMSITESFRFLNDSSLALKEQQINNNDSKEK LKEVKAKLDRLVGLDKLKRLVDELEAFVKIQQKRQENQLATEPLVMHMVFKGNPGTGK TTIARIFGELFKELGLLSEGHLKEVERADLVGEYIGHTAQKTKDAIEEALGGILFIDE AYSLARGGTRDFGKESIDALVKGMEDNRDDLIVILAGYPREMEEFLETNPGLSSRFPI KVHFDDYTLDELIEIAELMLEEREYELSQTAESKLYKILAKKRQKSGSERGNARTVRN LIERAIRVQAMRVVEKEDIFRKDLMLIQPEDFEE" misc_feature <1245416..>1245556 /locus_tag="Acear_1159" /note="excinuclease ABC, A subunit; Region: uvra; TIGR00630" /db_xref="CDD:161968" misc_feature 1245515..1246297 /locus_tag="Acear_1159" /note="stage V sporulation protein K; Region: spore_V_K; TIGR02881" /db_xref="CDD:163057" misc_feature 1245644..1246042 /locus_tag="Acear_1159" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 1245659..1245682 /locus_tag="Acear_1159" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(1245662..1245685,1245848..1245850,1245965..1245967) /locus_tag="Acear_1159" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 1245836..1245853 /locus_tag="Acear_1159" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 1246016..1246018 /locus_tag="Acear_1159" /note="arginine finger; other site" /db_xref="CDD:99707" gene 1246335..1246940 /locus_tag="Acear_1160" /db_xref="GeneID:9513202" CDS 1246335..1246940 /locus_tag="Acear_1160" /note="InterPro IPR002917; KEGG: hor:Hore_11600 GTP-binding conserved hypothetical protein TIGR00650; PFAM: GTP-binding protein HSR1-related; SPTR: B8CX93 Putative uncharacterized protein; PFAM: GTPase of unknown function" /codon_start=1 /transl_table=11 /product="GTP-binding protein HSR1-related protein" /protein_id="YP_003827747.1" /db_xref="GI:302391927" /db_xref="GeneID:9513202" /translation="MAKSLVVGQTNAGKTCFTINFADYLGINELKFTLKQPAGFSSQR TYQLQAAREELVSSRSHTTTEIQQVQLQLPVGKGKKELKLMDTCGLVEGIHSDRGIRK AMAQTLTKLRQADIVLHIIDLAKLSSEGIQKISELDLEIYNYCKVEKCYAVLANKTDL KVAQKNLSFLQEKLNQAKIIPISALYQQGFRKVKRFLLKNL" misc_feature 1246350..1246937 /locus_tag="Acear_1160" /note="Era (E. coli Ras-like protein)-like. This family includes several distinct subfamilies (TrmE/ThdF, FeoB, YihA (EngG), Era, and EngA/YfgK) that generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs)...; Region: Era_like; cd00880" /db_xref="CDD:133256" misc_feature 1246356..1246379 /locus_tag="Acear_1160" /note="G1 box; other site" /db_xref="CDD:133256" misc_feature order(1246365..1246382,1246800..1246805,1246809..1246811, 1246881..1246886) /locus_tag="Acear_1160" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133256" misc_feature 1246518..1246532 /locus_tag="Acear_1160" /note="Switch I region; other site" /db_xref="CDD:133256" misc_feature 1246521..1246523 /locus_tag="Acear_1160" /note="G2 box; other site" /db_xref="CDD:133256" misc_feature order(1246587..1246604,1246671..1246673) /locus_tag="Acear_1160" /note="Switch II region; other site" /db_xref="CDD:133256" misc_feature 1246590..1246601 /locus_tag="Acear_1160" /note="G3 box; other site" /db_xref="CDD:133256" misc_feature 1246800..1246811 /locus_tag="Acear_1160" /note="G4 box; other site" /db_xref="CDD:133256" misc_feature 1246881..1246889 /locus_tag="Acear_1160" /note="G5 box; other site" /db_xref="CDD:133256" gene 1247018..1247614 /locus_tag="Acear_1161" /db_xref="GeneID:9513203" CDS 1247018..1247614 /locus_tag="Acear_1161" /note="KEGG: hor:Hore_11590 hypothetical protein; SPTR: B8CX92 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827748.1" /db_xref="GI:302391928" /db_xref="GeneID:9513203" /translation="MLKIIIPSIHDLLAVLFTGISIKLMDDYLDQILDRLQNKKTLAL KWGRATLPYTLLSFSLAVVFNYSWAVSLFWASYILGMGYDLTDELPTGLKAYQESLLL LLIGIYILPIENFLSSLSVMVGIQLIDDLIDLKYDKEVYRNNSVYLLGKRQVILLLIA VLAIGVYFDPKKTLTVLVVTPLIVLLLEDETGRGRKNQ" gene 1247583..1247816 /locus_tag="Acear_1162" /db_xref="GeneID:9513204" CDS 1247583..1247816 /locus_tag="Acear_1162" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827749.1" /db_xref="GI:302391929" /db_xref="GeneID:9513204" /translation="MKLGGEGKINEIIVFSFFIILGVGYLIGYYFGRQDGIKKGRVKT EISLREESLQKGYCVLCKDNKNIQALQEKNRDI" gene 1247858..1248100 /locus_tag="Acear_1163" /db_xref="GeneID:9513205" CDS 1247858..1248100 /locus_tag="Acear_1163" /note="COGs: COG1923 Uncharacterized host factor I protein; InterPro IPR005001:IPR010920:IPR001163; KEGG: cth:Cthe_0774 RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; SPTR: A3DDI0 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq" /codon_start=1 /transl_table=11 /product="RNA-binding protein Hfq" /protein_id="YP_003827750.1" /db_xref="GI:302391930" /db_xref="GeneID:9513205" /translation="MTSQINLQDSFLNQVRREDITVTVYLVNGFQLSGKVTGFDNFTV ILDTDDQQQMIYKHAISTITPEKAVESLFKSNNGTD" misc_feature 1247882..1248064 /locus_tag="Acear_1163" /note="Hfq, an abundant, ubiquitous RNA-binding protein, functions as a pleiotrophic regulator of RNA metabolism in prokaryotes, required for transcription of some transcripts and degradation of others. Hfq binds small RNA molecules called riboregulators that...; Region: Hfq; cd01716" /db_xref="CDD:99753" misc_feature order(1247921..1247941,1247945..1247998) /locus_tag="Acear_1163" /note="Sm1 motif; other site" /db_xref="CDD:99753" misc_feature order(1247933..1247944,1247975..1247977,1248008..1248010, 1248014..1248031,1248035..1248052) /locus_tag="Acear_1163" /note="intra - hexamer interaction site; other site" /db_xref="CDD:99753" misc_feature 1247945..1247950 /locus_tag="Acear_1163" /note="inter - hexamer interaction site [polypeptide binding]; other site" /db_xref="CDD:99753" misc_feature order(1247975..1247977,1247981..1247986,1248023..1248025) /locus_tag="Acear_1163" /note="nucleotide binding pocket [chemical binding]; other site" /db_xref="CDD:99753" misc_feature 1248011..1248046 /locus_tag="Acear_1163" /note="Sm2 motif; other site" /db_xref="CDD:99753" gene 1248218..1248859 /locus_tag="Acear_1164" /db_xref="GeneID:9513206" CDS 1248218..1248859 /locus_tag="Acear_1164" /note="InterPro IPR019734:IPR013026:IPR001440:IPR011990; KEGG: hor:Hore_11550 tetratricopeptide TPR_2 repeat protein; PFAM: TPR repeat-containing protein; SPTR: B8CX88 hypothetical protein; PFAM: Tetratricopeptide repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827751.1" /db_xref="GI:302391931" /db_xref="GeneID:9513206" /translation="MKRLDIVLVLIILLVFGVFNNSAISKSKYQSEWKDLIETNQKLI KQEEKDNPKNIKAHFRLGVAYANLGKIDLAKEEFDFLDELDEKKEDKELKKLTKYYEK QLDETSSGPLLLNYLGFAYYADHNYESSLQIFKKIVKKDSENIWSHNYLATVYGKLGK YDKAEKVLKRSMEIRDDDYTHFLLGAVYYKQGSIFKALYHVGKSGSVATKLLD" misc_feature 1248554..1248829 /locus_tag="Acear_1164" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature order(1248554..1248556,1248560..1248565,1248572..1248577, 1248662..1248667,1248671..1248676,1248683..1248688, 1248761..1248766,1248773..1248778,1248785..1248790) /locus_tag="Acear_1164" /note="binding surface" /db_xref="CDD:29151" misc_feature order(1248569..1248571,1248605..1248607,1248617..1248619, 1248626..1248628,1248671..1248673,1248707..1248709, 1248719..1248721,1248728..1248730,1248770..1248772, 1248806..1248808,1248818..1248820,1248827..1248829) /locus_tag="Acear_1164" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature 1248590..1248829 /locus_tag="Acear_1164" /note="Anaphase-promoting complex, cyclosome, subunit 3; Region: Apc3; pfam12895" /db_xref="CDD:193368" gene 1248938..1249240 /locus_tag="Acear_1165" /db_xref="GeneID:9513207" CDS 1248938..1249240 /locus_tag="Acear_1165" /note="InterPro IPR009057:IPR002514; KEGG: hor:Hore_13730 transposase IS3/IS911 family protein; PFAM: transposase IS3/IS911 family protein; SPTR: B8CXV6 transposase IS3/IS911 family protein; PFAM: transposase" /codon_start=1 /transl_table=11 /product="transposase IS3/IS911 family protein" /protein_id="YP_003827752.1" /db_xref="GI:302391932" /db_xref="GeneID:9513207" /translation="MGEKRKSYTEEFKKDAVELSNRSDKTVKDVSENLDIPYGTLVRW RREYKDKGDLAFPGHGKQKLTSEQKEIQRLKKELKDAKTERDILKKAVSIFSNEPK" misc_feature 1248944..1249177 /locus_tag="Acear_1165" /note="Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed...; Region: HTH_Hin_like; cl01116" /db_xref="CDD:186341" gene 1249288..1250100 /locus_tag="Acear_1166" /db_xref="GeneID:9513208" CDS 1249288..1250100 /locus_tag="Acear_1166" /note="COGs: COG2801 transposase and inactivated derivatives; InterPro IPR001584:IPR012337; KEGG: hor:Hore_00290 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: B8D037 Integrase catalytic region; PFAM: Integrase core domain" /codon_start=1 /transl_table=11 /product="Integrase catalytic region" /protein_id="YP_003827753.1" /db_xref="GI:302391933" /db_xref="GeneID:9513208" /translation="MCQVLEVSRSGYYKWLNRKPSQREKINKKLKLKIAEIYWQHNGT YGSPRIHRVLRKEGYTVNIKRVARLMRIMGLKAIQKRKFKRTTNSNHDLPLKENLLKR DFDIDKPDKVWVSDITYISTKKGWLYLAVVIDLYSRKVVGYSMSKRINTDLIMSATKM AISRRNPEAGLIFHSDRGSQYASHKLQNLFKQHSIRSSMSRKGDCWDNAVAESFFGSL KTELVYHKKYLTRNQARLDIFEYIAGYYNKVRLHSYLNYMSPKNYEKERKMA" misc_feature 1249300..1250082 /locus_tag="Acear_1166" /note="putative transposase OrfB; Reviewed; Region: PHA02517" /db_xref="CDD:177368" misc_feature 1249606..1249953 /locus_tag="Acear_1166" /note="Integrase core domain; Region: rve; cl01316" /db_xref="CDD:194099" gene 1250139..1250354 /locus_tag="Acear_1167" /db_xref="GeneID:9513209" CDS 1250139..1250354 /locus_tag="Acear_1167" /note="COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR017963:IPR001126; KEGG: cbe:Cbei_4241 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein; SPTR: C4IDI1 DNA polymerase IV; PFAM: impB/mucB/samB family" /codon_start=1 /transl_table=11 /product="UMUC domain protein DNA-repair protein" /protein_id="YP_003827754.1" /db_xref="GI:302391934" /db_xref="GeneID:9513209" /translation="MLEMELDILHVDMDVFYAAIEIRDNPELKDKPVIIGGTSKQGVV STASYEARKYGIHSAMPIFKAKQLCLR" misc_feature 1250163..>1250345 /locus_tag="Acear_1167" /note="Y-family of DNA polymerases; Region: PolY; cl12025" /db_xref="CDD:196304" misc_feature order(1250172..1250177,1250184..1250189,1250283..1250285, 1250292..1250294) /locus_tag="Acear_1167" /note="active site" /db_xref="CDD:176453" gene 1250469..1252073 /locus_tag="Acear_1168" /db_xref="GeneID:9513210" CDS 1250469..1252073 /locus_tag="Acear_1168" /note="InterPro IPR002110:IPR020683; KEGG: ankyrin repeat protein; PFAM: ankyrin; SMART: ankyrin; SPTR: A2EHX9 ankyrin repeat protein, PFAM: ankyrin repeat" /codon_start=1 /transl_table=11 /product="ankyrin" /protein_id="YP_003827755.1" /db_xref="GI:302391935" /db_xref="GeneID:9513210" /translation="MQERIFKEEPMVNIKQYINSDRFNVYQRNEAGLTPLMLAARDNS SIDVVISLIKQGAEVNNRDETGRTALMYAAEENPNPYLAATLIEQGAKVNVEDKDNRT ALMYAAQDNLNPQVIKILMDNGAEVNAQDKDERISLMFAAYKNDNPEVITTLINNGAK LEARDKYGRTALMYAAASNFNLDIITALIYNGAKIEVREESGKTALMVAAEYNLNPEV LIALIENGAEIKARDKDGLTALMYAACKNDNPEILDLLIEHGAKIKARDRDGFTALMY AAVNTSNPKIITTLINNDADVKARDKDGLTPLMYAAQGNPNSKVITTLLDNGAAIDAR DKDGFTVLMYAAANNSASEIITTLISSGAEIEAKDSNEKTVLMYAAQHNPYPEVILTL LNNGAEIDCCDVEGRTPLMYAAENKNTRILTTLLSNGAEVGVKDEEGRTALIYAAQNS SDPEVIKTLLNNGSEINIRDDKEKTPLIHAAEKNSNPEVIEALLEHGADAKLDSAGKV AIDYADENQSIKDTEIYWRLNDKSFN" misc_feature 1250574..1250861 /locus_tag="Acear_1168" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" misc_feature 1250646..1251035 /locus_tag="Acear_1168" /note="ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other...; Region: ANK; cd00204" /db_xref="CDD:29261" misc_feature 1250880..1251167 /locus_tag="Acear_1168" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" misc_feature 1251084..1251371 /locus_tag="Acear_1168" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" misc_feature 1251159..1251545 /locus_tag="Acear_1168" /note="ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other...; Region: ANK; cd00204" /db_xref="CDD:29261" misc_feature 1251288..1251575 /locus_tag="Acear_1168" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" misc_feature 1251567..1251950 /locus_tag="Acear_1168" /note="ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other...; Region: ANK; cd00204" /db_xref="CDD:29261" misc_feature 1251594..1251878 /locus_tag="Acear_1168" /note="Ankyrin repeats (3 copies); Region: Ank_2; pfam12796" /db_xref="CDD:193272" gene complement(1252554..1254101) /locus_tag="Acear_1169" /db_xref="GeneID:9513211" CDS complement(1252554..1254101) /locus_tag="Acear_1169" /note="COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR014249:IPR002797; KEGG: hor:Hore_22040 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: B8D0L3 polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B" /codon_start=1 /transl_table=11 /product="stage V sporulation protein B" /protein_id="YP_003827756.1" /db_xref="GI:302391936" /db_xref="GeneID:9513211" /translation="MFKKQTLLQGAFVLMIAGLINRTLGFGLRLVLVRIIGDQGIGLF QMVFPVFITFSILATFGFSVAISKFVSERISQNNYHEILKILKIAVIFAVITGSFFAI ILYFNAPFVANKVLNNAKTELLLKAIAPALFFVAIASMFRGFFQGLRMMIPTATSQIV EQITRIIVTLVVIKALLDYQLKYQVTGAALGISAGEGLGLLTLLLIFFKVKTDIIKQI QPTIDIKTNWNLFKELIKFGFPITIGKVVASLIYSLEAILIPAQLQAAGYSVTEATSL YGQLSGMVLQIVHLPTVITVAVTSSLIPAVSEAISANNHKRFQDHYQQALRLTIYTGL PAAVIFFLLPEKICSLLFGYPQAGSILQLFALGAIFLYLLQILKGILQGLGDPNIVVI NSIVGLIFEVVLIYFLVSQPDIGLKGAILAITVRFIVIAMLHFVAIYRKVDLTLNLKQ LIIKPFLAAGLLAASLTSIYQYFWQLSQNNLLSTFLAVSIGMTGYLAILITTGGITSR DIDRILN" misc_feature complement(1252740..1254083) /locus_tag="Acear_1169" /note="stage V sporulation protein B; Region: spore_V_B; TIGR02900" /db_xref="CDD:163065" misc_feature complement(1253325..1254083) /locus_tag="Acear_1169" /note="Polysaccharide biosynthesis protein; Region: Polysacc_synt; cl10513" /db_xref="CDD:187004" gene complement(1254216..1255148) /locus_tag="Acear_1170" /db_xref="GeneID:9513212" CDS complement(1254216..1255148) /locus_tag="Acear_1170" /note="COGs: COG4974 Site-specific recombinase XerD; InterProIPR011010:IPR010998:IPR004107:IPR002104:IPR 013762; KEGG: hor:Hore_11080 phage integrase family protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: B8CX42 Phage integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family" /codon_start=1 /transl_table=11 /product="integrase family protein" /protein_id="YP_003827757.1" /db_xref="GI:302391937" /db_xref="GeneID:9513212" /translation="MRNLTYHKAINSFTKYLIAERGYSESTVNHYKHDLSVFGRYLEK EFDCNLEELNVTNINRFEVSEFLSDIILVKDNSPEARNRKLYSLRSFFEYLKKRNIIK NNPTDSIEASKSELKSEPIYLNEKNMEKYLEAIKNYNSKYCSRDLAINKLFLYSGLRI SELVNLNLDDINYEDQSIKFFGKGNKERYVPLHQEALTAIKDYLPDRNKITPKNQDAR QALFLSNQRRRISVRTIQKMVKKYAKKAGVRNASKITPHKLRHTFASLLYQKTKDLRV LQDLLGHSDISTTQIYTHTDKEQRKSAIDEMPDM" misc_feature complement(1254234..1255148) /locus_tag="Acear_1170" /note="site-specific tyrosine recombinase XerC; Reviewed; Region: xerC; PRK00236" /db_xref="CDD:178942" misc_feature complement(1254246..1255121) /locus_tag="Acear_1170" /note="DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine recombinases that share the same fold in their catalytic domain containing six conserved active site...; Region: DNA_BRE_C; cl00213" /db_xref="CDD:193712" misc_feature complement(order(1254273..1254275,1254378..1254386, 1254600..1254602,1254669..1254674)) /locus_tag="Acear_1170" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29495" misc_feature complement(order(1254273..1254275,1254300..1254302, 1254369..1254371,1254378..1254380,1254600..1254602, 1254672..1254674)) /locus_tag="Acear_1170" /note="Int/Topo IB signature motif; other site" /db_xref="CDD:29495" misc_feature complement(order(1254273..1254275,1254300..1254302, 1254369..1254371,1254378..1254380,1254672..1254674)) /locus_tag="Acear_1170" /note="active site" /db_xref="CDD:29495" gene complement(1255218..1256159) /locus_tag="Acear_1171" /db_xref="GeneID:9513213" CDS complement(1255218..1256159) /locus_tag="Acear_1171" /note="InterPro IPR000305:IPR011010:IPR002104:IPR013762; KEGG: hor:Hore_11080 phage integrase family protein; PFAM: integrase family protein; SPTR: B8CX42 Phage integrase family protein; PFAM: Phage integrase family; GIY-YIG catalytic domain" /codon_start=1 /transl_table=11 /product="integrase family protein" /protein_id="YP_003827758.1" /db_xref="GI:302391938" /db_xref="GeneID:9513213" /translation="MYIYRLYNKDKEIIYIGRTKLERIELRIRTHFSNYKKYNLDSFW RKNIRYYDYAKVNNNYELAMYEIFYINKYNPCNNKENKFNCPLTVELPELSFSNTKHV EKAGVDLEYYLDIYSEWLGKLQSKSQAITFQDKKEIIQKVDQYLPKNINKLFQTIKTE QKTNWIRNSLAIKLISYTGLRTSELIDLDYKDIDLSKRALIFTRNNETHLMPINKELI PTLERHIQNNIESQNKPLFVSTRGNRMNHRSLQMVIAKYRSIIEDKLNFKLTANNLRQ LFIKTLLTITDNFDLIKSICGIGKNRINEIKLNHKVL" misc_feature complement(1255926..1256156) /locus_tag="Acear_1171" /note="GIY-YIG catalytic domain; Region: GIY-YIG; cl01061" /db_xref="CDD:194023" misc_feature complement(1255311..>1255739) /locus_tag="Acear_1171" /note="DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine recombinases that share the same fold in their catalytic domain containing six conserved active site...; Region: DNA_BRE_C; cl00213" /db_xref="CDD:193712" misc_feature complement(order(1255335..1255337,1255344..1255346, 1255548..1255550,1255617..1255619)) /locus_tag="Acear_1171" /note="Int/Topo IB signature motif; other site" /db_xref="CDD:29495" misc_feature complement(order(1255335..1255337,1255344..1255346, 1255617..1255619)) /locus_tag="Acear_1171" /note="active site" /db_xref="CDD:29495" misc_feature complement(order(1255344..1255352,1255548..1255550, 1255614..1255619)) /locus_tag="Acear_1171" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29495" gene complement(1256236..1256409) /locus_tag="Acear_1172" /db_xref="GeneID:9513214" CDS complement(1256236..1256409) /locus_tag="Acear_1172" /note="KEGG: dhd:Dhaf_2715 hypothetical protein; SPTR: B8FWC9 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827759.1" /db_xref="GI:302391939" /db_xref="GeneID:9513214" /translation="MSTSKISECVLEHKPCTDCGECNYCDLDETKICDNCMECIEGNQ EFRAIEVSDIKYE" gene 1256979..1257602 /locus_tag="Acear_1173" /db_xref="GeneID:9513215" CDS 1256979..1257602 /locus_tag="Acear_1173" /EC_number="3.4.21.88" /note="COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterProIPR006200:IPR015927:IPR006199:IPR019759:IPR 006197:IPR011991:IPR011056; KEGG: aoe:Clos_1549 LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24/S26A/S26B, conserved region; PRIAM: Repressor lexA; SPTR: A8MFC9 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA binding domain; peptidase S24-like; TIGRFAM: SOS regulatory protein LexA" /codon_start=1 /transl_table=11 /product="SOS-response transcriptional repressor, LexA" /protein_id="YP_003827760.1" /db_xref="GI:302391940" /db_xref="GeneID:9513215" /translation="MEDLSARQQQILNFIIEEINQKGYPPSVREIADAVGLSSPSTVH SHLTTLEEKDYIRKDPTKPRAIEVLHEPISEEETEKEMVNIPLLGRVTAGKPILAVEN IEDTFPISLEYISDTTDQLFMLTVEGESMIEAGILDGDYVIVKQQNTAQNRDIVVALL DKEVTVKRFFKEEDHIRLQPENETMEPIITSDVQILGKVVGVYRQLS" misc_feature 1256979..1257173 /locus_tag="Acear_1173" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 1256988..1257590 /locus_tag="Acear_1173" /note="LexA repressor; Validated; Region: PRK00215" /db_xref="CDD:178931" misc_feature 1257342..1257578 /locus_tag="Acear_1173" /note="Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (...; Region: S24_LexA-like; cd06529" /db_xref="CDD:119397" misc_feature order(1257366..1257368,1257477..1257479) /locus_tag="Acear_1173" /note="Catalytic site [active]" /db_xref="CDD:119397" gene complement(1257607..1259112) /locus_tag="Acear_1174" /db_xref="GeneID:9513216" CDS complement(1257607..1259112) /locus_tag="Acear_1174" /note="COGs: COG0815 Apolipoprotein N-acyltransferase; InterPro IPR004563:IPR003010; KEGG: dat:HRM2_47870 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: C0QHH7 Apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase" /codon_start=1 /transl_table=11 /product="apolipoprotein N-acyltransferase" /protein_id="YP_003827761.1" /db_xref="GI:302391941" /db_xref="GeneID:9513216" /translation="MYNKSGSRFIMPILSGILLGIPFQFPELYFVNWIGLIPLLLVIK NQSVKGVFKSGVISGGVFFGFILYWLAYPQMIFDLPIILAIGTVVLLCSLLAFFIGIF SVAANYILTNHRIWSFLLIPTAWTTLEYLRVLVTFKNLPFGIIGYSQAYLPLLIQIAD LVGVYGVTFLVILLNILIYKVILYLALENILTKKEVIISCLILIITVGYGIVKLDINS PLNQKEKTLRLGMMQPNIRQKIKWNRNHQSKIIDKYIDLTEELLTNKEIDLIIWPETA VPFILNDGRLQQKKLFQKIDSWNLPLLTGALNQTNGIIYNQALLINYNLDIIDKYSKV KLVPFGEYLPYKDYFPKFIRGMINDKTPGTKLNNFNYQGINWSNPICSEILNPDLVSK LAVNNHFLINISNEAWFKKSSGPIQTWQSTIFRAVENRKPVIKVSNTGISGVINAQGR VVKQITPFQAKTFTYNLRIKEPEKTVYSRFGNYFIYLITLISTGLLLMRYY" misc_feature complement(1257616..1259094) /locus_tag="Acear_1174" /note="apolipoprotein N-acyltransferase; Reviewed; Region: lnt; PRK00302" /db_xref="CDD:178970" misc_feature complement(1257640..1258434) /locus_tag="Acear_1174" /note="Apolipoprotein N-acyl transferase (class 9 nitrilases); Region: ALP_N-acyl_transferase; cd07571" /db_xref="CDD:143595" misc_feature complement(order(1257898..1257900,1257958..1257963, 1257967..1257972,1258090..1258092,1258102..1258104, 1258114..1258116,1258291..1258293)) /locus_tag="Acear_1174" /note="putative active site [active]" /db_xref="CDD:143595" misc_feature complement(order(1257970..1257972,1258114..1258116, 1258291..1258293)) /locus_tag="Acear_1174" /note="catalytic triad [active]" /db_xref="CDD:143595" misc_feature complement(order(1257649..1257663,1257790..1257795, 1257829..1257834,1257838..1257846,1257850..1257855, 1257937..1257942,1257949..1257963,1257967..1257969, 1258066..1258074,1258093..1258095,1258102..1258113)) /locus_tag="Acear_1174" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:143595" gene complement(1259252..1260832) /locus_tag="Acear_1175" /db_xref="GeneID:9513217" CDS complement(1259252..1260832) /locus_tag="Acear_1175" /note="COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: hor:Hore_19140 Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like; SPTR: B8CZE2 Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter family" /codon_start=1 /transl_table=11 /product="transporter, NhaC family (TC 2.A.35)" /protein_id="YP_003827762.1" /db_xref="GI:302391942" /db_xref="GeneID:9513217" /translation="MSEYGVLSILPPLLAIILAWWSREVLISLFIGILVGATILADFN PLVGFMRTVDTYMVNSLTDSWNVSILLFLLTLAGMVGIISRSGATQAVADYLAKKAKT ARKAQIATWFMGLLIFFDDYANTLIVGNTMRSITDKLKISREKLAYIVDCTAAPVTSM ALISTWVGYEMGLIQDAFTKLGIERNIYATFLQTVPYRFYSVFALFLVLIIASLGKDY GPMYDAEMRARKEGKLLRDDATPMASKELTEMKTPDENALNWYDAFIPIVSVIIITLI GLWYNGGGAEGATIRKAFGDADSSVVLLWASFGGTIIAALMSFGKRVLSIEEVMEAWI DGAKSLAIASAILILAWSLGGVIDELGTANYIVKLTKGVVPPFLVPTMMFVLPCVVAF ATGTSWGANAIIMPLAIPMAVKLGAPLTPTIGAVLTGCVFGDHCSPISDTTIMSSTSS AADHIDHVKTQIPYAITAGVIAVVFGFIPAGLGISAVFLVPIGLIALYVTVNLLGKEV SESKEVIESQETVEASSS" misc_feature complement(1259336..1260772) /locus_tag="Acear_1175" /note="Na+/H+ antiporter [Energy production and conversion]; Region: NhaC; COG1757" /db_xref="CDD:31943" misc_feature complement(1259402..1260355) /locus_tag="Acear_1175" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene complement(1261219..1261461) /locus_tag="Acear_1176" /db_xref="GeneID:9513218" CDS complement(1261219..1261461) /locus_tag="Acear_1176" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827763.1" /db_xref="GI:302391943" /db_xref="GeneID:9513218" /translation="MSREITIYLSEEIDNFITTLSFEEGISEEEVIVEILRDYYTVIQ DEYDDYEIPNELFSLKNEEGLLTISDTYKKKFNESE" gene complement(1261545..1261832) /locus_tag="Acear_1177" /db_xref="GeneID:9513219" CDS complement(1261545..1261832) /locus_tag="Acear_1177" /note="COGs: COG2119 membrane protein; InterPro IPR001727; KEGG: amt:Amet_4329 hypothetical protein; PFAM: protein of unknown function UPF0016; SPTR: A6TW35 Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0016" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827764.1" /db_xref="GI:302391944" /db_xref="GeneID:9513219" /translation="MNWKLFFTTYAMLFLAELGDKTQLAVFTLVTQNESPIPIFLGAS AALITVTLIAAFFGNMITKYVPESYLQLGAGVIFIVIGIFVLKDALGNLVM" misc_feature complement(1261611..1261817) /locus_tag="Acear_1177" /note="Uncharacterized protein family UPF0016; Region: UPF0016; pfam01169" /db_xref="CDD:189869" gene complement(1262158..1262292) /locus_tag="Acear_1178" /pseudo /db_xref="GeneID:9513220" gene complement(1262346..1262465) /locus_tag="Acear_1179" /pseudo /db_xref="GeneID:9513221" gene complement(1262661..1263161) /locus_tag="Acear_1180" /db_xref="GeneID:9513222" CDS complement(1262661..1263161) /locus_tag="Acear_1180" /note="KEGG: rer:RER_04930 amidase substrates transport protein; SPTR: Q53185 Putative transporter protein amiS2; PFAM: AmiS/UreI family transporter" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827765.1" /db_xref="GI:302391945" /db_xref="GeneID:9513222" /translation="MYEIIIAAVLFVDAFVLFVLGAETLGYGKVKTAGIATFIGGFFQ LINGLILIFLLNNAYDGFLVWIFAITFLYAGYIFAKEMTTDALASALGMLGIFVAYYF VDMALAGYQVWLILMGSYIILYAIFVAFLNEKVSAKLTGWYAIAVSILTCLVPGMYYL SGNSFH" gene complement(1263298..1263981) /locus_tag="Acear_1181" /db_xref="GeneID:9513223" CDS complement(1263298..1263981) /locus_tag="Acear_1181" /note="COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterProIPR000595:IPR001808:IPR012318:IPR018490:IPR 014710:IPR011991; KEGG: tpd:Teth39_2267 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: B0K8F6 transcriptional regulator, Crp/Fnr family; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain" /codon_start=1 /transl_table=11 /product="Crp/Fnr family transcriptional regulator" /protein_id="YP_003827766.1" /db_xref="GI:302391946" /db_xref="GeneID:9513223" /translation="MIEKKVLKNSSYFATLSEKNLDKIVNLMFVREYKEGEIIFFEEE KGEGLFFIKSGKVKIAKIVESGEEQILHILKQGEIFAEVVLFDGSNYPATAIAMEDSQ IGILRNKDIERLITEVPEIALKILKVMSKRLRRAQQTIRNLGLKNTESRTASILLYLA KEHGIDGKNRNQVEINLSLSQQELSNLVGASRETISRVLKKLKEKDLIATSRQQIVIK DLLGLKRII" misc_feature complement(1263325..1263966) /locus_tag="Acear_1181" /note="cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:31008" misc_feature complement(1263604..1263945) /locus_tag="Acear_1181" /note="effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO...; Region: CAP_ED; cd00038" /db_xref="CDD:28920" misc_feature complement(order(1263703..1263711,1263736..1263741)) /locus_tag="Acear_1181" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:28920" misc_feature complement(order(1263619..1263627,1263637..1263645)) /locus_tag="Acear_1181" /note="flexible hinge region; other site" /db_xref="CDD:28920" misc_feature complement(1263331..>1263420) /locus_tag="Acear_1181" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene complement(1264064..1264762) /locus_tag="Acear_1182" /db_xref="GeneID:9513224" CDS complement(1264064..1264762) /locus_tag="Acear_1182" /note="InterPro IPR017896:IPR017900:IPR001450; KEGG: hor:Hore_21860 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8D0J6 4Fe-4S ferredoxin iron-sulfur binding domain protein" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003827767.1" /db_xref="GI:302391947" /db_xref="GeneID:9513224" /translation="MKKRPIIKINEEECNGCGNCVVDCEEGALKIVDGKAKLVNEVFC DGLGDCIGNCPTGALTIEKRAAKEFDPEATEEHVKKMKESSCSCPGSKIKVMNKETEE NQDNEVTVKSQLQNWPIQIHLLPSEAPYFENANLLVTADCVPAAYGDYHQQLLKDKIA VMGCPKLDNASSYVNKLSAIIANNNLNSITIARMEVPCCSGLVKIVKEALVEAESNLN IEVVTIGVNGELNK" misc_feature complement(1264577..>1264750) /locus_tag="Acear_1182" /note="RPB11 and RPB3 subunits of RNA polymerase; Region: RNAP_RPB11_RPB3; cl11409" /db_xref="CDD:196219" misc_feature complement(<1264409..1264744) /locus_tag="Acear_1182" /note="putative oxidoreductase Fe-S binding subunit; Reviewed; Region: PRK12769" /db_xref="CDD:183733" gene complement(1264881..1265531) /locus_tag="Acear_1183" /db_xref="GeneID:9513225" CDS complement(1264881..1265531) /locus_tag="Acear_1183" /note="COGs: COG1564 Thiamine pyrophosphokinase; InterPro IPR006282:IPR007371:IPR007373; KEGG: csc:Csac_2348 thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; SPTR: A4XLZ1 Thiamine pyrophosphokinase; TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase" /codon_start=1 /transl_table=11 /product="thiamine pyrophosphokinase" /protein_id="YP_003827768.1" /db_xref="GI:302391948" /db_xref="GeneID:9513225" /translation="MKRVILFANGELKGRDKFYQDYINNDDFIVCADGGTEYTYRLGI EPNLILGDLDSISSQILKYYRNQNVEWQQYPARKNKTDTQLVIEELIKKGYKKIIIFA ALGGRFDHSLGNLYLLEGLHQSDITIKLVSSEEIIEVIKDNKIIKNKINRTISLLPLT KKVTNIHLSGFEYELDGTTFYRGNTLGLSNIIRDKKASIKFDTGTLLIIINKNNKE" misc_feature complement(1264902..1265522) /locus_tag="Acear_1183" /note="Thiamine pyrophosphokinase; Region: TPK; cd07995" /db_xref="CDD:153431" misc_feature complement(1264905..1265519) /locus_tag="Acear_1183" /note="thiamine pyrophosphokinase; Region: thi_PPkinase; TIGR01378" /db_xref="CDD:188135" misc_feature complement(order(1264962..1264973,1265007..1265009, 1265013..1265015,1265190..1265192,1265202..1265204, 1265211..1265219,1265223..1265225,1265283..1265300, 1265367..1265372,1265376..1265378,1265430..1265438, 1265502..1265510)) /locus_tag="Acear_1183" /note="active site" /db_xref="CDD:153431" misc_feature complement(order(1264905..1264907,1264965..1264970, 1264974..1264976,1265052..1265057,1265061..1265063, 1265067..1265069,1265073..1265075,1265127..1265129, 1265133..1265135,1265184..1265189,1265193..1265216, 1265220..1265222,1265280..1265282,1265292..1265300, 1265409..1265411,1265418..1265420,1265430..1265432)) /locus_tag="Acear_1183" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:153431" misc_feature complement(order(1264962..1264973,1265007..1265009, 1265013..1265015,1265289..1265300,1265376..1265378)) /locus_tag="Acear_1183" /note="thiamine binding site [chemical binding]; other site" /db_xref="CDD:153431" gene complement(1265544..1266092) /locus_tag="Acear_1184" /db_xref="GeneID:9513226" CDS complement(1265544..1266092) /locus_tag="Acear_1184" /note="COGs: COG3859 membrane protein; InterPro IPR012651; KEGG: nth:Nther_0280 proton-coupled thiamine transporter YuaJ; PFAM: thiamine transporter YuaJ; SPTR: B2A4V6 Proton-coupled thiamine transporter YuaJ; TIGRFAM: proton-coupled thiamine transporter YuaJ; PFAM: Thiamine transporter protein (Thia_YuaJ); TIGRFAM: probable proton-coupled thiamine transporter YuaJ" /codon_start=1 /transl_table=11 /product="proton-coupled thiamine transporter YuaJ" /protein_id="YP_003827769.1" /db_xref="GI:302391949" /db_xref="GeneID:9513226" /translation="MNDQKVRRLTELGIALALATILNFVRIYQLPQGGSVSLEMIPIF FIALRWGLKEGITLGGMYGILQLILGAKIFYPLQAILDYPVAFGSLGLAGIIHNWIDK NNLKENGILIFSSVILAGGFRLLIHIISGVIFFGEYTPKGQNVWLYSLGYNASYMLPE ILITIIVMIFLVKSSSSFIATK" misc_feature complement(1265556..1266068) /locus_tag="Acear_1184" /note="Thiamine transporter protein (Thia_YuaJ); Region: Thia_YuaJ; cl01588" /db_xref="CDD:163989" gene complement(1266350..1267741) /locus_tag="Acear_1185" /db_xref="GeneID:9513227" CDS complement(1266350..1267741) /locus_tag="Acear_1185" /note="COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: hor:Hore_21890 hypothetical protein; PFAM: extracellular solute-binding protein family 1; SPTR: B8D0J9 Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding protein" /codon_start=1 /transl_table=11 /product="extracellular solute-binding protein family 1" /protein_id="YP_003827770.1" /db_xref="GI:302391950" /db_xref="GeneID:9513227" /translation="MLKKFFSDVNWLLLVGMVLLIIITTGALTFYFNYEGQKGFKIDP KVQLDSKKEYEITYWDYPLFIGQEKEYENFLKEAISEFNDMYPNIKVNYKLLSFIEGR DKLKNSLEAGNPPDIYHGIFGNKLMNKKLQIPVNIFFKQKEESERDKYNKVGLKAFTY NQQVWGLPNWIKPQVWAGNQKLFSKTNSTVDQIEKNGWTWGEFQQIASEIADLDKNTS IIFNPYNPKLFYQLLSANGKDRLVTSKGNLAFTSDDLKQAFEFLDDLRSNEVFPREPE EMNKKMLPNFWQQKAGVIAPVNIWLLNNFYQKNKEESDVKLTLLPLPTKNLEAKKVPV DVAGLLLFRQQEYKGDDHTKAAYKFAKFLNQQKNLFIAKKLKILPAYLPLESLWREEV KLRVRLKEQLLSYNKRGVVESPSGFDKAKCENKIQNVINKNYEDFWLEGVSILTVIDR IMNKSKKIANNNN" misc_feature complement(1266356..1267594) /locus_tag="Acear_1185" /note="ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]; Region: UgpB; COG1653" /db_xref="CDD:31839" gene complement(1267761..1268699) /locus_tag="Acear_1186" /db_xref="GeneID:9513228" CDS complement(1267761..1268699) /locus_tag="Acear_1186" /note="COGs: COG1376 conserved hypothetical protein; InterPro IPR002477:IPR005490; KEGG: hor:Hore_21900 ErfK/YbiS/YcfS/YnhG family protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding domain 1 protein; SPTR: B8D0K0 ErfK/YbiS/YcfS/YnhG family protein; PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain" /codon_start=1 /transl_table=11 /product="ErfK/YbiS/YcfS/YnhG family protein" /protein_id="YP_003827771.1" /db_xref="GI:302391951" /db_xref="GeneID:9513228" /translation="MSLKKISILLIVMLFIFSSSVLAEDAETSCSCQEYRQLKLTESR MEGNDIWELQRELKKLGFYDQQLNSTYNWSTYLAVKEFQKANDLPTTGVVNESIWQQI AHKLKKGEKITEASSDDLEAPEGEVFLLIDTYKKKMTVYSDGEPYHEFPVAVGKPSTK SPIGEWAIIAKDAHWGGGFGVRWMRLNVPWGIFGIHGTNKPGSIGTAASHGCIRMYNR HVKILYSWVDIGTRVKIIGKRDPIKITHNLRPGQTGKDVLLFQEKLREYGFDPGYTDG RFGDSTEKAIKEFKYIYGLQDDLTADQNTFYILNLK" misc_feature complement(1268394..1268564) /locus_tag="Acear_1186" /note="Putative peptidoglycan binding domain; Region: PG_binding_1; pfam01471" /db_xref="CDD:190001" misc_feature complement(1267995..1268324) /locus_tag="Acear_1186" /note="L,D-transpeptidase catalytic domain; Region: YkuD; pfam03734" /db_xref="CDD:190732" misc_feature complement(1267773..1267943) /locus_tag="Acear_1186" /note="Putative peptidoglycan binding domain; Region: PG_binding_1; pfam01471" /db_xref="CDD:190001" gene complement(1268815..1269933) /locus_tag="Acear_1187" /db_xref="GeneID:9513229" CDS complement(1268815..1269933) /locus_tag="Acear_1187" /note="COGs: COG0795 permease; InterPro IPR005495; KEGG: hor:Hore_17610 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: B8CYZ1 Permease YjgP/YjgQ family protein; PFAM: Predicted permease YjgP/YjgQ family" /codon_start=1 /transl_table=11 /product="permease YjgP/YjgQ family protein" /protein_id="YP_003827772.1" /db_xref="GI:302391952" /db_xref="GeneID:9513229" /translation="MIPIKLIDKYILKEVTILFLIGLIIISIIMLSSFLFELTDLIII RKVALSSVLKLLIYKLPTIIVRAIPMSVLFATIIGLGRLSKDNEITALRMGSISIYRL ILPLIILGLIISGGNYLLNEKVVPFSNKRFQVIMNETVLKSRMPEIKENIFFKGTRNK LFYIGKYNESQSTVKDIVIYELDSKQDYPNIIMANKGRVYKDNKWELNEGYIYKYNND GNLINKDKFKDITVGFKANINRFADQQSPSEMSIKELKEEIEFLKKIGADPNSLLVEY HLKFAMPFSALIFILVGSILSIKGKNSKGVNILFTIIIIFFYYLLLSLSRSLGRNEVF SPLVAAWLTNFIFIILGAILFYIDNPFRKFKQKIKRVL" misc_feature complement(1268866..1269924) /locus_tag="Acear_1187" /note="Predicted permeases [General function prediction only]; Region: COG0795; cl12074" /db_xref="CDD:189246" misc_feature complement(1268866..1269909) /locus_tag="Acear_1187" /note="Predicted permease YjgP/YjgQ family; Region: YjgP_YjgQ; pfam03739" /db_xref="CDD:190734" gene complement(1269930..1272065) /locus_tag="Acear_1188" /db_xref="GeneID:9513230" CDS complement(1269930..1272065) /locus_tag="Acear_1188" /EC_number="3.6.1.-" /note="COGs: COG0514 Superfamily II DNA helicase; InterProIPR006293:IPR018329:IPR014001:IPR001650:IPR 002121:IPR014021:IPR002464:IPR010997:IPR011545:IPR018982; KEGG: drm:Dred_1261 ATP-dependent DNA helicase RecQ; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein; SPTR: A4J3Z2 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; ATP-dependent DNA helicase, RecQ family" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase, RecQ-like protein" /protein_id="YP_003827773.1" /db_xref="GI:302391953" /db_xref="GeneID:9513230" /translation="MSRRPKQILQNYFGYKSFKPGQKEIIDNILAGNNTIGILPTGGG KSICFQIPAVCLSGVTVVFSPLISLMKDQIDSLRAVGIDATFINSSLSRKEIRNRIEG VKLDQYDLLYIAPERLESNKFFSLLKTIDISLIVVDEAHCISQWGHDFRPAYLLISNL LDKLDDNPIVTAFTATATEDVRKDIGSILDIKESNIFITSFDRPNLNFKLIKGEDKRD FIEEYVATNSGEAGIIYAATRKEVDNLYSFLQEEGFAVGKYHAGLSSVVRKKTQDDFL YDRIEVVVATNAFGMGIDKSNVRYVIHHNMPKDIESYYQEAGRAGRDGEQSECVLLFS PSDTRLPKYFIEESNLSLERKKLAHKKLQQMINYSYTDSCLRNYILEYFGEDNPPAEC NNCSNCNDNQEIKDITVKAQKILSCIYRMNERYGITKTAKVLSGSKSKAILELDLNEL STYGIMPEYTIKEIKNLIKFLVAEGYIYLTEGKYSVTKLTDKAYSVLQDEKKVKRIVR KETEKISEDNELFDILRRLRKEIAAEERVAPFVIFHDSTLQDMVEKLPSNKEEMMKVS GMGKIKFKKYGFQFLEKINQYCVNKDIDREKTRIKQEKDKIIKNKELKSYMKSYKLYQ SDNNLEEIAEMRDLALTTVQNHIIRAAEEGQEVDLDSFVPAQYRQLILEKIEESSNDR LKPIKEALPEEISYFQIKAMACKKEILEG" misc_feature complement(1270305..1272050) /locus_tag="Acear_1188" /note="ATP-dependent DNA helicase RecQ; Region: recQ; TIGR01389" /db_xref="CDD:130456" misc_feature complement(1271538..1271969) /locus_tag="Acear_1188" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature complement(1271928..1271942) /locus_tag="Acear_1188" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature complement(1271643..1271654) /locus_tag="Acear_1188" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature complement(1271070..1271450) /locus_tag="Acear_1188" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature complement(order(1271202..1271210,1271283..1271288, 1271346..1271357)) /locus_tag="Acear_1188" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(order(1271100..1271102,1271109..1271111, 1271121..1271123,1271184..1271186)) /locus_tag="Acear_1188" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(1270575..1270850) /locus_tag="Acear_1188" /note="RQC domain; Region: RQC; pfam09382" /db_xref="CDD:192276" misc_feature complement(1270314..1270517) /locus_tag="Acear_1188" /note="HRDC domain; Region: HRDC; cl02578" /db_xref="CDD:154997" misc_feature complement(1269945..>1270229) /locus_tag="Acear_1188" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG4955" /db_xref="CDD:34563" gene complement(1272110..1273519) /locus_tag="Acear_1189" /db_xref="GeneID:9513231" CDS complement(1272110..1273519) /locus_tag="Acear_1189" /note="COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR003607:IPR002646:IPR006674; KEGG: hor:Hore_14390 poly(A) polymerase/tRNA nucleotidyl transferase; PFAM: polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: B8CY19 poly(A) polymerase/tRNA nucleotidyl transferase; PFAM: HD domain; poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG" /codon_start=1 /transl_table=11 /product="polynucleotide adenylyltransferase/metal dependent phosphohydrolase" /protein_id="YP_003827774.1" /db_xref="GI:302391954" /db_xref="GeneID:9513231" /translation="MEHLNYLVEILNQHNIKGYLVGGIIRDYLLEREIKDIDVAINDK VRIIARKFADLVTGGFVVLDKKRDTYRVVTEELNYDLAPIIGDSIYEDLLGRDFTINA LASDIDGIDLDKDRGLSGEIIDPTGGRSDLKEKTIRAINKETFKEDPLRLLRGVRFRA ELNFTINSKTEELMQKDSQLITEVASERIKEELLKIAAADKAADNLEYLEKKSGLLSY LIPEIKMMKKIGKCKYHKEDVWTHSLYTVEQLEELLRDVFWSKQVSNDQIPLLKLAAL FHDIGKLWTEEMIDGEVHFYGHHKEGAKKIVPILRQLTFSRRKIKYIKRLIRYHMRPL SLYSADNLTQKGKYRFFRAAKGVVGDVCLLAAADILATKLWNERREEIADNLDFIKEL ISDTEKMKKRTSKLLLTGYDVMELLNIEEGPQVGRILDKIREAQAQGKIENRTEAVEY LKKLKNKFNYTEVIHRKSD" misc_feature complement(1273118..1273519) /locus_tag="Acear_1189" /note="Nucleotidyltransferase (NT) domain of ClassII CCA-adding enzymes; Region: NT_ClassII-CCAase; cd05398" /db_xref="CDD:143388" misc_feature complement(1272155..1273498) /locus_tag="Acear_1189" /note="tRNA CCA-pyrophosphorylase; Provisional; Region: PRK13299" /db_xref="CDD:183958" misc_feature complement(order(1273217..1273219,1273226..1273237, 1273280..1273282,1273319..1273321,1273406..1273408, 1273412..1273414,1273439..1273444,1273451..1273456)) /locus_tag="Acear_1189" /note="active site" /db_xref="CDD:143388" misc_feature complement(order(1273217..1273219,1273229..1273237, 1273406..1273408,1273412..1273414,1273442..1273444, 1273451..1273456)) /locus_tag="Acear_1189" /note="NTP binding site [chemical binding]; other site" /db_xref="CDD:143388" misc_feature complement(order(1273280..1273282,1273406..1273408, 1273412..1273414)) /locus_tag="Acear_1189" /note="metal binding triad [ion binding]; metal-binding site" /db_xref="CDD:143388" misc_feature complement(1272839..1273033) /locus_tag="Acear_1189" /note="Probable RNA and SrmB- binding site of polymerase A; Region: PolyA_pol_RNAbd; pfam12627" /db_xref="CDD:193105" misc_feature complement(<1272602..1272805) /locus_tag="Acear_1189" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" gene complement(1273661..1274125) /locus_tag="Acear_1190" /db_xref="GeneID:9513232" CDS complement(1273661..1274125) /locus_tag="Acear_1190" /note="KEGG: cdf:CD0529 hypothetical protein; SPTR: Q188X6 Putative membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827775.1" /db_xref="GI:302391955" /db_xref="GeneID:9513232" /translation="MKLKGRKTLNQLKAMIIVGIMILIGQKIGYGMSITKAIPGIVLV IGIAMLALIIKDLFPNIKFPAFAWASMTALILSMPFMPTAELFLKYTDQVSFLGTTTP ILAFAGISVGNKIETLKRLSWKVFIVAIAVFIGTFFGSAIISHFVLKIQGII" gene complement(1274115..1274987) /locus_tag="Acear_1191" /db_xref="GeneID:9513233" CDS complement(1274115..1274987) /locus_tag="Acear_1191" /note="KEGG: cdf:CD0530 hypothetical protein; SPTR: C0D1D8 Putative uncharacterized protein; PFAM: protein of unknown function (DUF3100)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827776.1" /db_xref="GI:302391956" /db_xref="GeneID:9513233" /translation="MEEKKKPEELLETKGRTSIFIRLYLTALLIVMITEAIGIIKFSL GPGQVVLLPMLFAVIIGMAITPDLLGKAISGLKNLVSKEEIETAGPLVMISLLPLGVK YGTLVGPNIVKVVQAGPAFLLQELGNLGTICIALPFALFLGMKREAVGATASICREPT LGVIGERYGIASPEGTGVLGTYLTGTVFGTIFFGLLGALSASLTGLHPYALAMASGMG SGSMMTAASGSLAEAVPEMKDTILAYAATSNMLTGVTGLYSVIFIGLPAVNFLYDKLE PVIGSEEGEETNEA" misc_feature complement(1274163..1274897) /locus_tag="Acear_1191" /note="Protein of unknown function (DUF3100); Region: DUF3100; pfam11299" /db_xref="CDD:151740" gene complement(1275022..1276350) /locus_tag="Acear_1192" /db_xref="GeneID:9513234" CDS complement(1275022..1276350) /locus_tag="Acear_1192" /note="COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR017144:IPR011650:IPR002933; KEGG: cdf:CD0528 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Q188X2 Putative amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain; TIGRFAM: amidohydrolase" /codon_start=1 /transl_table=11 /product="amidohydrolase" /protein_id="YP_003827777.1" /db_xref="GI:302391957" /db_xref="GeneID:9513234" /translation="MNKEELKQKICKVIDENRERIIAFNQKIYDNPELGYKETFSTEA ISQELKDLGLKVKKDIAVTGCKGRIENQNPGPTIALLGELDSITCPEHPDADPETGAV HACGHNIQLSAMLGAAIGLVSSNVVNELEGNVEFIAVPAEEYVELEYRSKLLEEGKIK FFGGKQELIYQGELDNVDLAMMIHSLDLGDKKALIGGSGNGFVGKKVQFVGKESHAGS APEEGVNALNGAMLAMSNIHAQRETFPEEEKVRVHPIITKGGDIVNVVPADVRIETYV RARTIEGIIDANKKVNRSLKAGAMAVGAEINISDMPGYLPLLTDTEFDTLFKSNLTKF IGENNIQEGASFTGSFDFGDVSHLMPSLHPFFGGVKGDIHTRDFRLDDPELAIITPAK TLATTIVDLLFDEAQTAKEIIDDFDPELTKEEYLGFLDGITRDIKEDFKD" misc_feature complement(1275145..1276308) /locus_tag="Acear_1192" /note="M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family; Region: M20_Acy1L2_like_2; cd09849" /db_xref="CDD:193573" misc_feature complement(1275145..1276305) /locus_tag="Acear_1192" /note="Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]; Region: AbgB; COG1473" /db_xref="CDD:31662" misc_feature complement(order(1275229..1275231,1275799..1275801, 1275922..1275924,1276030..1276032,1276036..1276038)) /locus_tag="Acear_1192" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193573" gene complement(1276423..1276803) /locus_tag="Acear_1193" /db_xref="GeneID:9513235" CDS complement(1276423..1276803) /locus_tag="Acear_1193" /note="COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056:IPR019897:IPR013813:IPR006175; KEGG: cdf:CD2513 translation inhibitor endoribonuclease; PFAM: Endoribonuclease L-PSP; SPTR: Q182K0 Putative translation inhibitor endoribonuclease; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP" /codon_start=1 /transl_table=11 /product="endoribonuclease L-PSP" /protein_id="YP_003827778.1" /db_xref="GI:302391958" /db_xref="GeneID:9513235" /translation="MTKELIHTDEAPAAVGSYSQAVKVGDTIYVSGQIAIDPETEELI DGDVEAQTKQVLDNLTAILKETDCTLKDVVKAEVFLDDINNFDSVNDIYAEYFAEEPP ARACMEVARLPKDVAVEISVIAVK" misc_feature complement(1276432..1276752) /locus_tag="Acear_1193" /note="YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no...; Region: YjgF_YER057c_UK114_family; cd00448" /db_xref="CDD:100004" misc_feature complement(order(1276435..1276437,1276441..1276443, 1276447..1276449,1276477..1276500,1276525..1276527, 1276534..1276536,1276567..1276569,1276573..1276575, 1276579..1276584,1276588..1276590,1276708..1276713, 1276717..1276719,1276723..1276725,1276732..1276734, 1276738..1276740,1276747..1276752)) /locus_tag="Acear_1193" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100004" misc_feature complement(order(1276447..1276449,1276492..1276494, 1276534..1276536,1276546..1276548,1276750..1276752)) /locus_tag="Acear_1193" /note="putative active site [active]" /db_xref="CDD:100004" gene complement(1276897..1277565) /locus_tag="Acear_1194" /db_xref="GeneID:9513236" CDS complement(1276897..1277565) /locus_tag="Acear_1194" /note="COGs: COG2964 conserved hypothetical protein; InterPro IPR013559; KEGG: drm:Dred_1367 YheO domain-containing protein; PFAM: YheO domain protein; SPTR: A4J495 YheO domain protein; PFAM: YheO-like PAS domain" /codon_start=1 /transl_table=11 /product="YheO domain protein" /protein_id="YP_003827779.1" /db_xref="GI:302391959" /db_xref="GeneID:9513236" /translation="MRILVDDTREVHPYLENVKSIAKGIHKFLGQDSEVVIHDLSDPT SSIIFLAGGLTDRELGGPVTDLVLKTLRQESNPEDIVNYRNQTEDGRTFKSSTLFIKD DREEVIGCLCINYDVTKLSLVQNIINNFCAMEEDSNKDSNQKEIEYEIFANDINDVLN KMIKAAIDQVNKPVPFMEKEDKLKVIEFLEQKSAFIIKGAVERIADDLGVSRYTVYNY LKEI" misc_feature complement(1276900..1277544) /locus_tag="Acear_1194" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG2964" /db_xref="CDD:32784" misc_feature complement(1277185..1277523) /locus_tag="Acear_1194" /note="YheO-like PAS domain; Region: PAS_6; pfam08348" /db_xref="CDD:116929" gene complement(1277663..1279141) /locus_tag="Acear_1195" /db_xref="GeneID:9513237" CDS complement(1277663..1279141) /locus_tag="Acear_1195" /note="COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: hla:Hlac_0614 Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like; SPTR: A6CJY8 Na+/H+ antiporter; PFAM: Na+/H+ antiporter family" /codon_start=1 /transl_table=11 /product="transporter, NhaC family (TC 2.A.35)" /protein_id="YP_003827780.1" /db_xref="GI:302391960" /db_xref="GeneID:9513237" /translation="MPEKEINEDRINFRVGTFGGAVPMLFFVFWAIFISVQGAPDTKG LIVGALIGLVLGMFLVKDEWEKYCEKIFEGMSQDVGVVAIVAWFFAGTFAQILQEGGL VKGLVWIASSMGVEGSAFVIVTFLLAALFSTAVGTGYGTVVAFTTLMYPAGIIMGAHP IVLLAGILSGAAFGDNLAPVSDTTIVSAVTQETDVPGVVRSRFKYCIIAAIPAMILLF IFGTASGKMGISAAKATEYMSNSAEPIGLLFLIPFALVIYLAMSGNHLIISLTWGILT ASVMGVTTGLIKIQDLLFINGEEGVVTGAIVDGVMGYVPMAVLILLIVAAGYIMQCGG TMESMKKWLASKIQNKVSRAELSMWLLIAGLNVFITINTAAEIAAAPFVKEVGEDFHI HPYRRANLLDATTSALGYIFPWSGAVLLAYSTLQNVAGQYDFVNVIPTTKLWPYVFHG WFLVLVMFGAVITGFGRRYIGPNGEPVKEIPEAKENSMGMEI" misc_feature complement(1278479..>1278973) /locus_tag="Acear_1195" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature complement(1277747..1278634) /locus_tag="Acear_1195" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene complement(1279203..1280081) /locus_tag="Acear_1196" /db_xref="GeneID:9513238" CDS complement(1279203..1280081) /locus_tag="Acear_1196" /EC_number="4.3.1.17" /note="COGs: COG1760 L-serine deaminase; InterPro IPR004642:IPR005130; KEGG: amt:Amet_2318 L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain; PRIAM: L-serine ammonia-lyase; SPTR: A6TQK7 L-serine dehydratase, iron-sulfur-dependent, alpha subunit; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit" /codon_start=1 /transl_table=11 /product="L-serine ammonia-lyase" /protein_id="YP_003827781.1" /db_xref="GI:302391961" /db_xref="GeneID:9513238" /translation="MYDFETVKELINLTEKHEVSITEVVIKREKELSEKSEVEIRKRM NKSLEVMREAIKQGLTEDITSMSGLVGGDAKLIASAREREETITGNIMSQAITRALAV SEVNAAMGKIVAVPTAGSCGILPGALLTIADDIDISDKEIVDSLFVASGIGLAVAKQA SVSGAAGGCQAECGTASGMAAAAITYLLGGDNNQVANATAIALKNILGLVCDPVAGLV EIPCIKRNTMGAANALVAAEMALAGVESKIPIDEVIIAMKEVGEALPEELRETSLGGL AATPTGCRIKEQLKAD" misc_feature complement(1279245..1280072) /locus_tag="Acear_1196" /note="L-serine deaminase [Amino acid transport and metabolism]; Region: SdaA; COG1760" /db_xref="CDD:31946" misc_feature complement(1279245..1280039) /locus_tag="Acear_1196" /note="Serine dehydratase alpha chain; Region: SDH_alpha; cl12120" /db_xref="CDD:196345" gene complement(1280097..1280768) /locus_tag="Acear_1197" /db_xref="GeneID:9513239" CDS complement(1280097..1280768) /locus_tag="Acear_1197" /EC_number="4.3.1.17" /note="COGs: COG1760 L-serine deaminase; InterPro IPR004643:IPR005131:IPR002912; KEGG: cpf:CPF_2959 L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein; PRIAM: L-serine ammonia-lyase; SPTR: Q8XH62 Probable L-serine dehydratase beta subunit; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: ACT domain; serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit" /codon_start=1 /transl_table=11 /product="L-serine ammonia-lyase" /protein_id="YP_003827782.1" /db_xref="GI:302391962" /db_xref="GeneID:9513239" /translation="MSNLSAFDTLGPVMVGPSSSHTAGAVRIGNLAREIVGKDFKRVK IYLHGSFRETYQGHGTDKALIGGLLGLSTENSLIKKSFQLAKQKKIEFEFIPADLGKV HPNTVKLKIEDIDEDMNIITASSIGGGSIVVTEIDGVEVDLTGEYPTLITLHEDKPGV VAKVSAILNEYQLNIAEMKVVRQNKGTLATAVIGLDYQLDVSILNKIQKVSEVKKVKL VNPIE" misc_feature complement(1280148..1280768) /locus_tag="Acear_1197" /note="L-serine dehydratase, iron-sulfur-dependent, beta subunit; Region: sda_beta; TIGR00719" /db_xref="CDD:129802" misc_feature complement(1280355..1280732) /locus_tag="Acear_1197" /note="Serine dehydratase beta chain; Region: SDH_beta; pfam03315" /db_xref="CDD:190598" misc_feature complement(1280112..1280324) /locus_tag="Acear_1197" /note="ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme; Region: ACT; cl09141" /db_xref="CDD:195804" gene complement(1280916..1281695) /locus_tag="Acear_1198" /db_xref="GeneID:9513240" CDS complement(1280916..1281695) /locus_tag="Acear_1198" /note="COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792:IPR016032:IPR011991; KEGG: sil:SPO1488 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: C7G988 transcriptional regulator, LuxR family; PFAM: Bacterial regulatory proteins, luxR family" /codon_start=1 /transl_table=11 /product="LuxR family transcriptional regulator" /protein_id="YP_003827783.1" /db_xref="GI:302391963" /db_xref="GeneID:9513240" /translation="MEVITAEDWQLIHQFLIQVGSIDSFKDYKLKVLELIKALIAYDS SNFFVYNKLNSQFEKTTSVNVDSRVIDDYINYFQYIDGLKEKTFNQPHPSKSTQVMDY SKWKKTEFFNDFLRVNGCYYLCGVDLHYNDQLLGTLSFYRDEHSPDFNLKELLYLELL RPHLSNQLHKLIVLEKRSEIEEVDYSKLIEIEGLLYKFSNREIEVAKLVVSGLNNEEI AGELFISINTVKKHLYSIFRKIGVNSRAQLTSKLLKINFKN" misc_feature complement(1280934..1281104) /locus_tag="Acear_1198" /note="C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors...; Region: LuxR_C_like; cd06170" /db_xref="CDD:99777" misc_feature complement(order(1280961..1280963,1280994..1281008, 1281012..1281017,1281021..1281026,1281048..1281056, 1281093..1281101)) /locus_tag="Acear_1198" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:99777" misc_feature complement(order(1280934..1280939,1280946..1280948, 1280955..1280963,1281054..1281056,1281060..1281062, 1281066..1281068)) /locus_tag="Acear_1198" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:99777" gene 1281818..1282351 /locus_tag="Acear_1199" /db_xref="GeneID:9513241" CDS 1281818..1282351 /locus_tag="Acear_1199" /note="KEGG: conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827784.1" /db_xref="GI:302391964" /db_xref="GeneID:9513241" /translation="MKKLMVILGIMMLMNLCIISTASAFIGIENLNMLSIYEDSWVLD RFKPLEPGELDVGEYRISTNFGRIINDDYNDYNSNLNNYYIGFDTAFENDWYLNSSYN FTPYYQHSSQGDRSRYDNINLMLTRSFNDDNQFYCGYSRIKNKEKEYDSGEFSHIKKD TNDLFFIGAEFYGSFLD" gene complement(1282432..1283688) /locus_tag="Acear_1200" /db_xref="GeneID:9513242" CDS complement(1282432..1283688) /locus_tag="Acear_1200" /note="COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: dae:Dtox_0989 hypothetical protein; PFAM: protein of unknown function DUF2088; SPTR: C1TA68 Uncharacterized conserved protein; PFAM: Uncharacterized conserved protein (DUF2088)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827785.1" /db_xref="GI:302391965" /db_xref="GeneID:9513242" /translation="MKLKYGEEELNFDQSRLTKSRVLLPNEQRGVADPLKAVKDSLQN PINSLSIAELVNEELPDKVVIIVNDVSRPTPYEYLLPPLLEELHKVGIEQENITFVIA TGIHEPNTKEQNLSIFGEKLLDEYKFISHNPDENLVDLGKLSSGNRLYLNREVVEADL LITLGVILPHYFAGFSGGRKSILPGVAGRESIEYNHSHMVDLIGNLPPIEENQISQEM LEAARKAGVDFILNVVTNSNKEIVEVVAGNYKQAWQQGVNTSSEMYHVSLEEKADAAI VSAGGYPKDINFYQAQKALDNADYATKEGGTIILAAECREGLGENIFTDWLSSSTEPK DNLHRIKDKFVLGGHKAFAISKVAMKKDIILISDFDRETTEQLFAKKASSISEALDYV EEKHGQDYTSVIMPQGGLAVPVVDKE" misc_feature complement(1283086..1283676) /locus_tag="Acear_1200" /note="Domain of unknown function (DUF2088); Region: DUF2088; pfam09861" /db_xref="CDD:150523" misc_feature complement(1282447..1283592) /locus_tag="Acear_1200" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3875" /db_xref="CDD:33664" gene complement(1283746..1284636) /locus_tag="Acear_1201" /db_xref="GeneID:9513243" CDS complement(1283746..1284636) /locus_tag="Acear_1201" /note="InterPro IPR000620; KEGG: oih:OB0608 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A6CU20 Putative uncharacterized protein; PFAM: EamA-like transporter family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827786.1" /db_xref="GI:302391966" /db_xref="GeneID:9513243" /translation="MTESRFNPYLILILGVFIISFAAILIKLTTAPAPVVAFYRMALA SIILFPIVIVRNRGEIKEVLTRKYFISIFCGGFFLAAHFIFWITSLNYTTVASSVVFV AMQPIFVTLGSYLIFKEEASASLIVGIVVAVVGSVIIGFSDLKVAGNFLYGDLLALAG AVMIAGYVLIASKLREELSLLPYVFVIYSISALFLYIFVLGQGYKLVSYSLNDYFIFF LLALGPNLIGHTSFNWALKYVSSPVVATSILVEPIGSTILAFFILNEVPPIGTLIGSI FILSGIYLAVREDSKGKEKN" misc_feature complement(1283794..1284543) /locus_tag="Acear_1201" /note="Carboxylate/Amino Acid/Amine Transporter; Region: 2A78; TIGR00950" /db_xref="CDD:162128" misc_feature complement(1283776..1284153) /locus_tag="Acear_1201" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene complement(1284730..1285374) /locus_tag="Acear_1202" /db_xref="GeneID:9513244" CDS complement(1284730..1285374) /locus_tag="Acear_1202" /note="COGs: COG1075 acetyltransferase and hydrolase with the alpha/beta hydrolase fold; InterPro IPR000073; KEGG: nth:Nther_0618 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: B2A6T2 Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase fold protein" /protein_id="YP_003827787.1" /db_xref="GI:302391967" /db_xref="GeneID:9513244" /translation="MNNKVVLVHGFSKDSRDMLQLQENLNQLGYEGITVDLPLTFKTI ETAASIFKKEMEILISSLDDEELIHLVGHSTGGLIVRNFLATTDTIDKVGRAVLIGTP NYGSQLADIAADLSTILVNILKTLRSLQTEEVRKLELVEDSKIDIGAIAGNKNNLLLG KLLSKESDGLVHVESVKYEGLKDFIILSYGHKEIHYKFETAELVVSFLEKGKFE" misc_feature complement(<1285120..1285362) /locus_tag="Acear_1202" /note="Putative serine esterase (DUF676); Region: DUF676; pfam05057" /db_xref="CDD:191180" misc_feature complement(1284745..>1285173) /locus_tag="Acear_1202" /note="Alpha/beta hydrolase of unknown function (DUF915); Region: DUF915; cl14892" /db_xref="CDD:196853" gene complement(1285408..1286175) /locus_tag="Acear_1203" /db_xref="GeneID:9513245" CDS complement(1285408..1286175) /locus_tag="Acear_1203" /note="KEGG: cbi:CLJ_B0745 hypothetical protein; SPTR: C3L1K2 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827788.1" /db_xref="GI:302391968" /db_xref="GeneID:9513245" /translation="MEKELLSYVKKELDLVEDSIYLLDSKAGDVTGDGIEDNIYLIGN KEDNDAIFAENITLVVQNGATGRYISVSLETDSGYGSRLFIGDFTKNGVADVKVSIDS GGSGGVAYYYIYSFNGRSLELIFDFEEFNQNYEYKVNYRDFYKVEVINKTLGKIFVID ISYRDAEYLSEIYYAEGRLKEPIEGDVLPLGGLFPIVRDERKDTYDLFAIQRIIGRYN ADGLGYAQTFLTWDRNEFLPTNFEVALLGQEIDDQIL" gene complement(1286315..1287124) /locus_tag="Acear_1204" /db_xref="GeneID:9513246" CDS complement(1286315..1287124) /locus_tag="Acear_1204" /note="KEGG: mta:Moth_1313 hypothetical protein; SPTR: Q2RIW3 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1638)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827789.1" /db_xref="GI:302391969" /db_xref="GeneID:9513246" /translation="MKKAVISCKVLYEEIFELINGDFDVEFLPQGLHNLPNCEDMRDE IQEVIDELEAKKDYDYIILGYGLCSGGVEGLKAKEASLVIPKVHDCIPMFLGGREIKD ELEKGGTYYLSRGWIDCGGDTYKRYLFLANKEEELQKWIDKFRDYQSGDSQKIVDWYQ KDRYQKLAELGYPEDKARFVSFEALKNYDSITLIDNDNLDSIHYRYTEAMYNFIDDLL KEERGEGLDYQVVKGDTKILKDLLYFDELDEKNQTNLAIIPPNEGLQLEIR" misc_feature complement(1286618..1287049) /locus_tag="Acear_1204" /note="Protein of unknown function (DUF1638); Region: DUF1638; pfam07796" /db_xref="CDD:149066" gene complement(1287182..1287874) /locus_tag="Acear_1205" /db_xref="GeneID:9513247" CDS complement(1287182..1287874) /locus_tag="Acear_1205" /note="KEGG: ctc:CTC02003 hypothetical protein; SPTR: Q892T6 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827790.1" /db_xref="GI:302391970" /db_xref="GeneID:9513247" /translation="MRNYEDRKVSINQEVVTEVRDKLNDFKREIANYSVNEVKTEELF RLLQRLYTLGGNLLAEFDEFIACQKGCNQCCDKLVYITELEGMMIDEFIMNNFNQDEI NEIQSEVNKRIRLRNSTDASKSYGEVIRSHKKEFSCIFYSQKNLCRVYPARPWNCRRH IVFSDRETCSLETEENPITLDNTSFTEVKDLVDDIEEEIYRLNDTFKNEIYYTLQGYA EEVICEIDKQEL" gene complement(1288443..1288520) /locus_tag="Acear_1206" /pseudo /db_xref="GeneID:9513248" gene 1288696..1289139 /locus_tag="Acear_1207" /db_xref="GeneID:9513249" CDS 1288696..1289139 /locus_tag="Acear_1207" /note="COGs: COG3238 conserved hypothetical protein; InterPro IPR006750; KEGG: drt:Dret_2106 protein of unknown function DUF606; PFAM: protein of unknown function DUF606; SPTR: C1SVQ5 Uncharacterized conserved protein; PFAM: protein of unknown function, DUF606" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827791.1" /db_xref="GI:302391971" /db_xref="GeneID:9513249" /translation="MTLIFMFFALLAGVIVTFQIGINSQLQLFLNNPVQAALVSFSVG TISLLLYSVIAGYDWPTLQEALQTPWWIWIGGVLGAIYVFSTIFLAPKLGATVLISLI ITGQLITSLILDHYGFLGFPQQAINPWRILGVILLIIGAVLIRSN" misc_feature 1288705..1289085 /locus_tag="Acear_1207" /note="Protein of unknown function, DUF606; Region: DUF606; cl01273" /db_xref="CDD:194091" gene complement(1289151..1289918) /locus_tag="Acear_1208" /db_xref="GeneID:9513250" CDS complement(1289151..1289918) /locus_tag="Acear_1208" /note="KEGG: nth:Nther_2043 hypothetical protein; SPTR: B2A719 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827792.1" /db_xref="GI:302391972" /db_xref="GeneID:9513250" /translation="MKQRSIIAIILLLIIICGVSGIGMADANVDIRVNGGGVIKVNNI IGGDLVSLLGNVESGPDAVVKGEITKIGGPGHVVTGFFGWEFSIFRVIVFYGLAVLVF VLIPKHQRRMTAALMEKPVRKLFIGFIALFALPVVISVAGISLIGIPLIPFMILSFII AKFIGYVAVVLAVGGRIRTVGNFEMNIFLQLLAGVVILWLIRSLAVIGVISYLVVTAL AVGTIIDTKFGTNRPWFNKEEFREISENDRDKEEEGE" gene 1290200..1290787 /locus_tag="Acear_1209" /db_xref="GeneID:9513251" CDS 1290200..1290787 /locus_tag="Acear_1209" /note="KEGG: drm:Dred_0877 IS605 family transposase OrfB; SPTR: A4J2W1 transposase, IS605 OrfB family; PFAM: Probable transposase" /codon_start=1 /transl_table=11 /product="IS605 family transposase OrfB" /protein_id="YP_003827793.1" /db_xref="GI:302391973" /db_xref="GeneID:9513251" /translation="MSNKHHITVHHIKLFKLTKTKRKQLNNLLKDWNKAIRSALKIVK HWDFTTYTKSHKQTYRVLRHNFNLPSQVAVEANRKAVETYKSASEKYRNNVQFHSQVP VSLVNEKGFELINNDSRYIAKIPIKGRKSIYCPLSFGEYQLNKIENPKYKLKTAKLYK YNNEWYIDLIMEYEQPKRETDTILGIDLGIVKLAT" gene complement(1291571..1292044) /locus_tag="Acear_1210" /db_xref="GeneID:9513252" CDS complement(1291571..1292044) /locus_tag="Acear_1210" /note="COGs: COG4708 membrane protein; InterPro IPR010387; KEGG: dtu:Dtur_1489 protein of unknown function DUF988; PFAM: protein of unknown function DUF988; SPTR: B8E126 Putative uncharacterized protein; PFAM: QueT transporter" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827794.1" /db_xref="GI:302391974" /db_xref="GeneID:9513252" /translation="MKINSKLITKIAGVAALYAVLTILLAPISYGAIQVRIAEALTLL PFFLGSWAAVGLWIGCMFANIFGGLGLIDIIGGSALTLVAGLLTARARNIWEAGIYPV IINALGVGLILNITLQLPYWSTSFYVGIGELISVYVIGVPAISITMEKVGSIFST" misc_feature complement(1291592..1292023) /locus_tag="Acear_1210" /note="QueT transporter; Region: QueT; cl01932" /db_xref="CDD:154659" gene complement(1292275..1293363) /locus_tag="Acear_1211" /db_xref="GeneID:9513253" CDS complement(1292275..1293363) /locus_tag="Acear_1211" /note="COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterProIPR005861:IPR001917:IPR015424:IPR004839:IPR 015421; KEGG: nth:Nther_1931 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: B2A6G9 Histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase" /codon_start=1 /transl_table=11 /product="histidinol-phosphate aminotransferase" /protein_id="YP_003827795.1" /db_xref="GI:302391975" /db_xref="GeneID:9513253" /translation="MVDEIRETIKNVSPYAHGKTIKEIKEEYGLDKVAKLCFNENPYA PYPNCLSAIKNEFENLNYYADADYIELKELIGERLGFAKKNIALSHGAVGILEILSKI FIQKGNEVIIPESTYGLYEDLSRSLGAVVKKAPLVSDKINVEVMLDKITPETKLIWLC NPHNPTGTIIKDSEFKYFLDQVPEDVWIIVDEAYYEFTDAEELPDTTATVKEGENIIL VRTFSKAYGMAGLRLGYALADQEIIRAIKQASQPFNANKAAIAGAKAVLKDDSYFKKA VNKINDSKEYLISELKKMNYQVLPSYTNFVFFRTSYPADEITNELLQNGVMVASGSRW NCDKGIRVSIGKPEENQKFLQELKRAGS" misc_feature complement(1292290..1293348) /locus_tag="Acear_1211" /note="histidinol-phosphate aminotransferase; Region: hisC; TIGR01141" /db_xref="CDD:162223" misc_feature complement(1292287..1293261) /locus_tag="Acear_1211" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature complement(order(1292668..1292670,1292692..1292697, 1292701..1292703,1292782..1292784,1292872..1292874, 1293013..1293015,1293085..1293093)) /locus_tag="Acear_1211" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(1292578..1292580,1292587..1292589, 1292668..1292676,1292803..1292805,1292983..1292985, 1293082..1293084)) /locus_tag="Acear_1211" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(1292692..1292694) /locus_tag="Acear_1211" /note="catalytic residue [active]" /db_xref="CDD:99734" gene complement(1293382..1295007) /locus_tag="Acear_1212" /db_xref="GeneID:9513254" CDS complement(1293382..1295007) /locus_tag="Acear_1212" /note="COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766; KEGG: nth:Nther_1932 thiamine pyrophosphate protein TPP binding domain protein; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: B2A6H0 Thiamine pyrophosphate protein TPP binding domain protein; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain" /codon_start=1 /transl_table=11 /product="thiamine pyrophosphate protein TPP binding domain protein" /protein_id="YP_003827796.1" /db_xref="GI:302391976" /db_xref="GeneID:9513254" /translation="MEKEINQIGADLVVKALEKLQVETIFGIPGIHNLDVYDSLLSSD LEHVTARHEQGAGFMADGYARTNEKPGVCLVISGPGITNIITPMGQAMADSVPMVVIS SQLPTSVLDQGTGSLHELKNSTYLTKSVAKESKRVMHKDKIRSSIEEAYHLAMTGRPG PVHVEIPLDILQAPISKVESSIMNNYISYDPWEDLNQDNKIESAANLLQEADRPMIIA GGGSSQSTEELRKLVEELEIPLVQTIAGKGVISEEHLLCLGASIKFDSIQKRIKNADC VLAVGTELAPTDLEGTELKIEGILIQIDMDPGNFQRNFAADISLRGDAQRILSEVIDR LDFKENSNNQLKLEELGHSKEELVEHRGIDEKELDFTLDMLNVIREAVPEGGVLVTDM TSPAYVARSEYPAYSPRTFLHPVGYGTLGYALPAAAGAKFANPNKDVVALTGDGGFQF TMQELGVLLEHQFSLPIIIWNNDGFGEIRRNEELRHPNETIAVNHKNPNLEDLARSYE FSFSSVTNSSELKTVLEDALAKPKPEIIEIKAK" misc_feature complement(1294507..1294977) /locus_tag="Acear_1212" /note="Pyrimidine (PYR) binding domain of POX and related proteins; Region: TPP_PYR_POX_like; cd07035" /db_xref="CDD:132918" misc_feature complement(1293424..1294968) /locus_tag="Acear_1212" /note="hypothetical protein; Provisional; Region: PRK07524" /db_xref="CDD:168991" misc_feature complement(order(1294726..1294731,1294738..1294740, 1294750..1294752,1294771..1294773,1294807..1294815, 1294819..1294824,1294831..1294836,1294843..1294845, 1294852..1294872,1294894..1294896,1294906..1294908, 1294918..1294923,1294936..1294938)) /locus_tag="Acear_1212" /note="PYR/PP interface [polypeptide binding]; other site" /db_xref="CDD:132918" misc_feature complement(order(1294621..1294623,1294630..1294632, 1294741..1294743,1294750..1294755,1294759..1294764, 1294771..1294773,1294846..1294848,1294852..1294863, 1294867..1294869,1294894..1294896,1294906..1294908, 1294915..1294923)) /locus_tag="Acear_1212" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132918" misc_feature complement(order(1294759..1294761,1294771..1294773, 1294849..1294851,1294921..1294923)) /locus_tag="Acear_1212" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132918" misc_feature complement(1294018..1294407) /locus_tag="Acear_1212" /note="Thiamine pyrophosphate enzyme, central domain; Region: TPP_enzyme_M; pfam00205" /db_xref="CDD:189448" misc_feature complement(1293424..1293891) /locus_tag="Acear_1212" /note="Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. These enzymes include, among others, the E1 components of the pyruvate, the acetoin...; Region: TPP_enzymes; cd00568" /db_xref="CDD:48162" misc_feature complement(order(1293586..1293588,1293592..1293594, 1293667..1293678,1293748..1293750)) /locus_tag="Acear_1212" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:48162" gene complement(1295231..1296160) /locus_tag="Acear_1213" /db_xref="GeneID:9513255" CDS complement(1295231..1296160) /locus_tag="Acear_1213" /note="COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: dde:Dde_0146 glycine betaine/L-proline ABC transporter, solute-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SPTR: Q317E9 Putative glycine betaine/L-proline ABC transporter, solute-binding protein; PFAM: Substrate binding domain of ABC-type glycine betaine transport system; TIGRFAM: choline ABC transporter, periplasmic binding protein" /codon_start=1 /transl_table=11 /product="glycine/betaine ABC transporter substrate-binding protein" /protein_id="YP_003827797.1" /db_xref="GI:302391977" /db_xref="GeneID:9513255" /translation="MKKLVVNLIILMMLVTIFAAPVAASNPEEPIVFGEADWPGIWGK DAVVEHILENIGYEVEIKTVKNVIIYNRMVDKEIDVFLGSWMPSDKPTRDELKGQFKI VKTNLDEGLYTLGVPKYVWEAGVRSFTDLDKYAEKFDHKIYAGPIGWKFTKAMKKAIK NDIYGLGDWKLVNSSQTAMIANMKRAVKKGDWIATLAWKPHWMNYVMDIKYLKDPKNI WVNAESWVDTITRVGFKQDRPQVHKFLTQFKTTTDMSNEWIYYIGYKDQEPERVAQRW VKNNLDVVKDWLKGVKAKNGKQAFEVLKNKVNN" misc_feature complement(1295273..1296106) /locus_tag="Acear_1213" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature complement(1295249..1296064) /locus_tag="Acear_1213" /note="choline ABC transporter, periplasmic binding protein; Region: ABC_choline_bnd; TIGR03414" /db_xref="CDD:188316" gene complement(1296534..1296773) /locus_tag="Acear_1214" /db_xref="GeneID:9513256" CDS complement(1296534..1296773) /locus_tag="Acear_1214" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827798.1" /db_xref="GI:302391978" /db_xref="GeneID:9513256" /translation="MNEFKELKKAKRVWNETADVTTKVILYQLNVECPNCKESYGSWK LLPPIQVINDRFHLVKYQCECSEVFKKIEDAREEE" gene complement(1296836..1296909) /locus_tag="Acear_R0072" /db_xref="GeneID:9513257" tRNA complement(1296836..1296909) /locus_tag="Acear_R0072" /product="tRNA-Gln" /db_xref="GeneID:9513257" gene complement(1297035..1297403) /locus_tag="Acear_1215" /db_xref="GeneID:9513258" CDS complement(1297035..1297403) /locus_tag="Acear_1215" /note="KEGG: viral A-type inclusion protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827799.1" /db_xref="GI:302391979" /db_xref="GeneID:9513258" /translation="MKEEHEDKEVDKRDEGIEDEDNFDRLENIIEENLEGIVNGDDDT ENVEMGQVQFPNTEADDEFIGDFKSDVAQQVGRFSDKVHMGSPSDEAGAIGQDALKDT IEKSREELAEKLNGAENDEE" gene complement(1297457..1297984) /locus_tag="Acear_1216" /db_xref="GeneID:9513259" CDS complement(1297457..1297984) /locus_tag="Acear_1216" /note="COGs: COG3926 Putative secretion activating protein; InterPro IPR008565:IPR018537; KEGG: abm:ABSDF1449 hypothetical protein; PFAM: protein of unknown function DUF847; peptidoglycan binding domain; SPTR: B0VL45 Putative uncharacterized protein; PFAM: Predicted peptidoglycan domain; Predicted lysozyme (DUF847)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827800.1" /db_xref="GI:302391980" /db_xref="GeneID:9513259" /translation="MDDEFERAFKKILDYEGGYSDEQKDHGGKTKYGITEKLARDYGH EGEMKDLELEKAKEIYYREFWANHLYSWIEDERIATEVFEQAVNMGAKTANKHLQKAY NLLADKEIAVDGIIGQRTLEAVNNFEHNSDLFKLLNILQAKKYINIVKNDASQQKFIR GWLRRVELDIDSRKS" misc_feature complement(1297715..1297966) /locus_tag="Acear_1216" /note="Predicted lysozyme (DUF847); Region: DUF847; pfam05838" /db_xref="CDD:147798" misc_feature complement(1297484..1297708) /locus_tag="Acear_1216" /note="Predicted Peptidoglycan domain; Region: PG_binding_3; pfam09374" /db_xref="CDD:117916" gene complement(1298172..1298882) /locus_tag="Acear_1217" /db_xref="GeneID:9513260" CDS complement(1298172..1298882) /locus_tag="Acear_1217" /note="COGs: COG2323 membrane protein; InterPro IPR007353; KEGG: hor:Hore_05430 predicted membrane protein; PFAM: protein of unknown function DUF421; SPTR: B8D273 Predicted membrane protein; PFAM: protein of unknown function (DUF421)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827801.1" /db_xref="GI:302391981" /db_xref="GeneID:9513260" /translation="MAEYIEAAWTTIIIFILLVILTRLVGRKLLAQVTFFDFVTGVTI GTIAGAYVVNEVRGNAVLLSPVVLVLCTLGLGYLTVKSLKIRKLVKGEPVVVIQNGKI LEDNMFKSRYTLDALEMQLREKDVFDINEVEFAVLESDGELSVLKKSQYNSITPNDLG LDTDYKGLATEIIKDGEVLEQNLKQNNLDFNWLYQELNNQGIDDVSRVMLATLNTDGS LYLDLKDETPDYTQKVED" misc_feature complement(1298205..1298882) /locus_tag="Acear_1217" /note="Protein of unknown function (DUF421); Region: DUF421; cl00990" /db_xref="CDD:193999" gene 1299190..1299657 /locus_tag="Acear_1218" /db_xref="GeneID:9513261" CDS 1299190..1299657 /locus_tag="Acear_1218" /note="KEGG: wri:WRi_010010 hypothetical protein; SPTR: Q73HD7 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827802.1" /db_xref="GI:302391982" /db_xref="GeneID:9513261" /translation="MNIFVLDENIQKCAKYHADKHVIKMILESAQLLCSAHWMTGNEA PYRLTHKNHPCSKWVRNSIENYRWLVRLGLALCKEYTYRYNRTHKTEEKLKWLRDNEP NLPDKEKTDFVLVMPDKYKCEDPVEAYRTYYRQEKEDIAAWKNRPIPDWFKID" gene complement(1299866..1301425) /locus_tag="Acear_1219" /db_xref="GeneID:9513262" CDS complement(1299866..1301425) /locus_tag="Acear_1219" /note="COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: dsy:DSY3643 hypothetical protein; PFAM: BCCT transporter; SPTR: Q24RB0 Putative uncharacterized protein; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport" /codon_start=1 /transl_table=11 /product="choline/carnitine/betaine transporter" /protein_id="YP_003827803.1" /db_xref="GI:302391983" /db_xref="GeneID:9513262" /translation="MAKIENEVEPSNKKLDIDPVVFGISVVISAILVIWGITATESFS KAVEIVFDVLVGNFGWSYLLFVSGTLVVTLIIGLSKYGDIKLGKPDEEPEFNTGSWFA MLFSAGMGIGLVFWGVAEPISHYASPPFGQGETAESALLAIRYSFFHWGLHPWALFSL FGMIIGYFGFRRGMPQLPSCTLYPLIGEKGVKGPIGKMFDILAVFATLFGMATSLGLG AQQINSGLNFLFGIPNNNIVAIIIIAIITVIFIVCTVTGLDSGIKHIGNINVWLSFLI LAAMITVGPTVFIFNYFTQGIGGYLQNIFNMSFFTSAVENSNWPGWWTVFYWAWWISW TPFVGGFIARISRGRTIREFVVATLFGPTILSLIWIATMGGSGIWLEQFSSGGIVGPV QSDVASAFFVALNQFPLGSIMSVIATILVATYFITSANSATFVMGMLTSYGTLDPSRK VKITWGTAEGLLAAILLLAGGLSALQTAAIASAFPFMIFMCFSIISFFKALQKDQTIQ NQGEFIGTIDI" misc_feature complement(1300061..1301365) /locus_tag="Acear_1219" /note="BCCT family transporter; Region: BCCT; cl00569" /db_xref="CDD:189118" gene complement(1301526..1302323) /locus_tag="Acear_1220" /db_xref="GeneID:9513263" CDS complement(1301526..1302323) /locus_tag="Acear_1220" /EC_number="2.1.1.13" /note="COGs: COG1410 methionine synthase I cobalamin-binding domain; InterPro IPR000489:IPR011005; KEGG: mta:Moth_2115 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; PFAM: dihydropteroate synthase DHPS; PRIAM: methionine synthase; SPTR: Q2RGN2 5-methyltetrahydrofolate--homocysteine S-methyltransferase; PFAM: Pterin binding enzyme" /codon_start=1 /transl_table=11 /product="methionine synthase" /protein_id="YP_003827804.1" /db_xref="GI:302391984" /db_xref="GeneID:9513263" /translation="MIIVGELINTSRDEVEPAVKDRDAEFIQDLAKRQEEAGADYIDV NCGTLIKEEPEALEWLVNTVQEVVDVPLCIDSPDPEAIKRGLEAHEGKALVNSITAED ERFSEILPLIQEYDAEIIALVMDDEGMPEDDTDRIKTATKLIDDLTAEGIAEEDIYVD PIIQPIGTDEEMGEYILSAIDEITNKYEDVHITCGLSNISHGLPQRRLLNQSFVLLAM SRGMDSAILDPLDKKIMSLATAADTLLGKDQYCGNYIKASKSDKLTV" misc_feature complement(1301640..1302323) /locus_tag="Acear_1220" /note="Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a...; Region: Pterin_binding; cl00219" /db_xref="CDD:197403" misc_feature complement(order(1301640..1301642,1301646..1301648, 1301727..1301729,1301739..1301741,1301844..1301846, 1301958..1301960,1302030..1302032,1302036..1302038, 1302099..1302101,1302297..1302299)) /locus_tag="Acear_1220" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29544" misc_feature complement(1301718..1302296) /locus_tag="Acear_1220" /note="Pterin binding enzyme; Region: Pterin_bind; pfam00809" /db_xref="CDD:189727" misc_feature complement(order(1301664..1301666,1301676..1301678, 1301688..1301690,1301796..1301801,1301811..1301813)) /locus_tag="Acear_1220" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29544" misc_feature complement(1301727..1301735) /locus_tag="Acear_1220" /note="inhibitor binding site; inhibition site" /db_xref="CDD:29544" gene complement(1302351..1302980) /locus_tag="Acear_1221" /db_xref="GeneID:9513264" CDS complement(1302351..1302980) /locus_tag="Acear_1221" /EC_number="2.1.1.13" /note="COGs: COG5012 cobalamin binding protein; InterPro IPR006158:IPR003759; KEGG: dth:DICTH_0565 trimethylamine corrinoid protein 2; PFAM: cobalamin B12-binding domain protein; methionine synthase B12-binding module cap domain protein; PRIAM: methionine synthase; SPTR: B5YD39 Trimethylamine corrinoid protein 2; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, methanosarcina family; methylmalonyl-CoA mutase C-terminal domain" /codon_start=1 /transl_table=11 /product="methionine synthase" /protein_id="YP_003827805.1" /db_xref="GI:302391985" /db_xref="GeneID:9513264" /translation="MSKFNEISEAVINGEEEKVAELVQDLVDDGEEPSKIIKEGLVAG MDVVGKRFKAQDMFVPEVLISAESMHAGMDIVKPLLADDDSSSNGTFMISTVDGDLHD IGKNLVSMMVEGAGYEVVDLGVDKSADEILEAVKEHNPDVLGLSALLTTTMPAMGDTI EALEEAGIRDEVKVILGGAPVSQDFADEIDADGYASDGSAATDLVRKFA" misc_feature complement(1302414..1302965) /locus_tag="Acear_1221" /note="methyltransferase cognate corrinoid proteins, Methanosarcina family; Region: pyl_corrinoid; TIGR02370" /db_xref="CDD:131423" misc_feature complement(1302414..1302962) /locus_tag="Acear_1221" /note="B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or...; Region: corrinoid_protein_B12-BD; cd02070" /db_xref="CDD:30208" misc_feature complement(order(1302444..1302446,1302531..1302539, 1302543..1302551,1302660..1302662,1302669..1302689)) /locus_tag="Acear_1221" /note="B12 binding site [chemical binding]; other site" /db_xref="CDD:30208" misc_feature complement(1302678..1302680) /locus_tag="Acear_1221" /note="cobalt ligand [ion binding]; other site" /db_xref="CDD:30208" gene complement(1303056..1304471) /locus_tag="Acear_1222" /db_xref="GeneID:9513265" CDS complement(1303056..1304471) /locus_tag="Acear_1222" /note="COGs: COG5598 Trimethylamine:corrinoid methyltransferase; InterPro IPR010426; KEGG: dhd:Dhaf_4326 trimethylamine methyltransferase; PFAM: trimethylamine methyltransferase; SPTR: Q24SP7 Putative uncharacterized protein; PFAM: Trimethylamine methyltransferase (MTTB)" /codon_start=1 /transl_table=11 /product="trimethylamine:corrinoid methyltransferase" /protein_id="YP_003827806.1" /db_xref="GI:302391986" /db_xref="GeneID:9513265" /translation="MIKRNFSSQDLLSDNEVKEIHEASMDLLENNGIEIMHEEARNIF AENGAKVEDKTVFLPRQVIEDALDKAPSSFTLHARNPEKNVTVGGNNSVLAPGYGSPS VTDIKEGRRDSTFEDYINFTKLAADSDNIDVLGGVIVEPTDVKDEIRHAKMLYVAAKN SDKCLMGSALGAKKARESFEMASMLFGEDEIIDDRPIVISLINTMSPLQFDERMLDAL IEHAKYNQAVVVASLIMSGSTGPMSIAGTLTLQNVEVLAGIVLSQLINPGTPAVYGSA TTIMDMKTSNLAIGSPEYAKFIGATAQLARYYDLPCRAGGSLTDSLMPDAQAGYEAMM TFKSTLNHGVNFVLHSAGLLENYMTMSYEKFIIDDEIISLLTNYQSGIGVNKELIAKE VIEEVGPAGHYLTEAHTMKHMKDFERPEVGNRTGYSSSDNIVPTMERAHEIYKERLEN FEAPELDPAIDEKLTDYIDSL" misc_feature complement(1303068..1304468) /locus_tag="Acear_1222" /note="Trimethylamine methyltransferase (MTTB); Region: MTTB; cl02383" /db_xref="CDD:174723" gene 1304925..1306226 /locus_tag="Acear_1223" /db_xref="GeneID:9513266" CDS 1304925..1306226 /locus_tag="Acear_1223" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: tex:Teth514_2350 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003827807.1" /db_xref="GI:302391987" /db_xref="GeneID:9513266" /translation="MKLAKYFIHKPNQTQQIVLGCLAYASARLYNIGNYQRKNWSKDS DKEYPDWYKQKKQLKTNFWYKNLPSQTAQETLKILADNWDSFYQSMEDYQDNPDKYNG EPNPPNYKPKDSKFNFRYLNNGFKIIDGKLRLSIPKQLKKYLKEEYSIANKFLWIRVP NELLSSNRDILNSTTRIEFKPLSDDTYKVILTYKVDTPTIKEDNGNYLSIDLGINNLM TCYSNQNQESFIIDGGQYLAINRYFDKKIKHYQSILNGQGKKTSKRIQNLYKKRRKQL FHLIHSATKKVVNYCIENNISRVIVGDIKNIRDDANLGKQTNQKLHKLPFDIIYHQLE YKLNLQGITLIKKNEKYTSQCSPYSKKVTKKYANKSNRVKRGLYIDKDNNQAFNADSI GAFNILRKYLQQRRKGKDITLQVKGLSNPVKYNWNNHQFAA" misc_feature 1304925..1306130 /locus_tag="Acear_1223" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature 1305111..1305848 /locus_tag="Acear_1223" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature 1305738..1305983 /locus_tag="Acear_1223" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature 1305900..1306124 /locus_tag="Acear_1223" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 1306588..1307259 /locus_tag="Acear_1224" /db_xref="GeneID:9513267" CDS 1306588..1307259 /locus_tag="Acear_1224" /note="InterPro IPR001647:IPR017937:IPR009057:IPR012287; KEGG: lsp:Bsph_1992 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A3I8T7 transcriptional regulator, TetR family protein; PFAM: Bacterial regulatory proteins, tetR family" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_003827808.1" /db_xref="GI:302391988" /db_xref="GeneID:9513267" /translation="MINVEETNIKTKRILKIFIEATTKIIKKEGIEGVTIRKVADIAG YNSATIYNYFENCNQLISFAAIKFISNYVQALPDYFDEENSTLENFLAVWECFCTYCF EDPKIYYAVFTEDIGNQSENLIKNYYSLFPEDLGNPPEEVMPMLMQFDFVERCKISIA PCIEEGYFTEEEAEEINEMIRLTYQGMLSLLINNRVDYSIQEATKRTMKYIRRIVNSY LKNSC" misc_feature 1306588..>1306992 /locus_tag="Acear_1224" /note="Transcriptional regulator [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:31500" misc_feature 1306642..1306770 /locus_tag="Acear_1224" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene complement(1307286..1308038) /locus_tag="Acear_1225" /db_xref="GeneID:9513268" CDS complement(1307286..1308038) /locus_tag="Acear_1225" /note="InterPro IPR002781; KEGG: hor:Hore_08910 predicted permease; PFAM: protein of unknown function DUF81; SPTR: B8CWH8 Predicted permease; PFAM: Sulfite exporter TauE/SafE" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827809.1" /db_xref="GI:302391989" /db_xref="GeneID:9513268" /translation="MSLFKVLTVLFAGTAAGFINTLAGGGSLIAMSALIFMGLPSAVA NGTNRIAILIQNIVAVTNFRQKGFSDFKFSFKLSIPTIIGAVIGSNLAVDLPEALFNK ILAGIMILILILIIVDPKEKMETTVEKLSSGRQLTAMVAFFFVGIYGGFIQGGVGFLF IITLSLITGFSLVKVNSIKVFVIAAYTIPSLAVFVINGKVAWLAGLILAVGNSLGAYL GSNFAVSKGDKWIKYILIIVILAIAISLLLGA" misc_feature complement(1307343..1308023) /locus_tag="Acear_1225" /note="Predicted permeases [General function prediction only]; Region: COG0730; cl00498" /db_xref="CDD:186038" misc_feature complement(1307343..1308014) /locus_tag="Acear_1225" /note="Sulfite exporter TauE/SafE; Region: TauE; pfam01925" /db_xref="CDD:190162" gene 1308204..1309061 /locus_tag="Acear_1226" /db_xref="GeneID:9513269" CDS 1308204..1309061 /locus_tag="Acear_1226" /note="COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014258:IPR003646:IPR014044; KEGG: hor:Hore_05140 SCP-like extracellular; PFAM: SCP-like extracellular; SMART: SH3 domain protein; SPTR: B8D245 SCP-like extracellular; PFAM: cysteine-rich secretory protein family; Bacterial SH3 domain; TIGRFAM: uncharacterized protein, YkwD family" /codon_start=1 /transl_table=11 /product="SCP-like extracellular" /protein_id="YP_003827810.1" /db_xref="GI:302391990" /db_xref="GeneID:9513269" /translation="MKKKFVILSVLLIVVLTLGACANTDENNQSRQDQNQNKMETKAS SIFQQADVKNMKVTTNKAEVKSGPSEKFKTIATLNKNETAKVLAQIKDWYVIQLENNR IGSVNSNQTKPIVEEGQPRPPQPQPTPQPEQTKTPEPKNPQENQSAEEIEPVNDLSSM ERQMVDLINEARKNNDVTPLKTDNELTRVARMKSQDMVKNDYFSHYSPTYGSPFDMLN KFGVEYIQAGENIAGNSSVEAAHRGLMNSTGHRRNILNPQYTHVGVGAKSSDKYGYIF TQLFISKPK" misc_feature 1308372..1308539 /locus_tag="Acear_1226" /note="Bacterial SH3 domain; Region: SH3_3; cl02551" /db_xref="CDD:141512" misc_feature 1308684..1309043 /locus_tag="Acear_1226" /note="SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5...; Region: SCP_bacterial; cd05379" /db_xref="CDD:88558" gene complement(1309761..1310549) /locus_tag="Acear_1227" /pseudo /db_xref="GeneID:9513270" gene complement(1310723..1311250) /locus_tag="Acear_1228" /db_xref="GeneID:9513271" CDS complement(1310723..1311250) /locus_tag="Acear_1228" /note="InterPro IPR002482:IPR018392; KEGG: hor:Hore_11320 peptidoglycan-binding LysM; PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; SPTR: B8CX65 peptidoglycan-binding LysM; PFAM: LysM domain" /codon_start=1 /transl_table=11 /product="peptidoglycan-binding lysin domain protein" /protein_id="YP_003827811.1" /db_xref="GI:302391991" /db_xref="GeneID:9513271" /translation="MVDDSRECPPNTEKYVIKAGDTLYELTQRFETTISALIGANPNI DPDNLQVGQEICIPLQERFPSCPEGNFYSIQPGDTLYKIAQRFNISVDDLQEANPRLD SQNLNVGEIICIPLATPPVECPESTVEYQIQAGDTFYEVAKRFGTTVEELQRLNPDVN PDALLIGQTICVPKA" misc_feature complement(1311077..1311211) /locus_tag="Acear_1228" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1311164..1311166,1311173..1311175, 1311188..1311190,1311197..1311199,1311206..1311208)) /locus_tag="Acear_1228" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature complement(1310894..1311175) /locus_tag="Acear_1228" /note="FOG: LysM repeat [Cell envelope biogenesis, outer membrane]; Region: LytE; COG1388" /db_xref="CDD:31578" misc_feature complement(1310906..1311040) /locus_tag="Acear_1228" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1310993..1310995,1311002..1311004, 1311017..1311019,1311026..1311028,1311035..1311037)) /locus_tag="Acear_1228" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature complement(1310732..1310863) /locus_tag="Acear_1228" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1310819..1310821,1310828..1310830, 1310843..1310845,1310852..1310854,1310861..1310863)) /locus_tag="Acear_1228" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" gene 1311505..1311714 /locus_tag="Acear_1229" /pseudo /db_xref="GeneID:9513272" gene complement(1311769..1311918) /locus_tag="Acear_1230" /db_xref="GeneID:9513273" CDS complement(1311769..1311918) /locus_tag="Acear_1230" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827812.1" /db_xref="GI:302391992" /db_xref="GeneID:9513273" /translation="MAEEEKNEEKNEKESFEMHDESVCTGVAQHVMRQAAKQQKEKNK EKDNK" gene complement(1311943..1313010) /locus_tag="Acear_1231" /db_xref="GeneID:9513274" CDS complement(1311943..1313010) /locus_tag="Acear_1231" /note="COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: hor:Hore_11260 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: B8CX59 Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold" /codon_start=1 /transl_table=11 /product="oxidoreductase domain protein" /protein_id="YP_003827813.1" /db_xref="GI:302391993" /db_xref="GeneID:9513274" /translation="MEQIKVGIIGCGMAWERLHYPAFQELQDKYKVTACCDVDFDKAR KATEMVGIGQEKAYQDYNEMINQEELDAVDIIVPIPENFPISEDVAEMGINIICEKPL ATSLEEAEEYSHLADRHRIQIMIAENYRYNEENNIIRDLIREQKIGDVVYFISNKITD FSEDMLGNKFAAKEWRQHPDYPGGRILDSAIHNLAGIRHIFGPIESLYAVGKPQDDDF NPYLSTNINLKFKNGIVGQFSYFPSGKEMQRPLVGTRIFGTEGMIYLEESKAGVINVA YNDGTREEIPYQPERGFYNELLDFYNSLTGQEAISVPPQMEYGDLKTVMAVLESIEEN KVVEVDKYDQYQLEEQVHVFG" misc_feature complement(1311991..1313010) /locus_tag="Acear_1231" /note="Predicted dehydrogenases and related proteins [General function prediction only]; Region: MviM; COG0673" /db_xref="CDD:31017" misc_feature complement(1312633..1313001) /locus_tag="Acear_1231" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(1312297..1312593) /locus_tag="Acear_1231" /note="Oxidoreductase family, C-terminal alpha/beta domain; Region: GFO_IDH_MocA_C; cl11611" /db_xref="CDD:159579" gene complement(1313187..1313486) /locus_tag="Acear_1232" /db_xref="GeneID:9513275" CDS complement(1313187..1313486) /locus_tag="Acear_1232" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827814.1" /db_xref="GI:302391994" /db_xref="GeneID:9513275" /translation="MVNEISISKRLQTLIDGNNTLKENLYQIAEWLNKNYNIRLYFCE IIGGRRWSFLAGNEGVISGRKIELTDSLGVIVEDYNALDEGDWAKVFNIIRKLNQ" gene complement(1313461..1314960) /locus_tag="Acear_1233" /db_xref="GeneID:9513276" CDS complement(1313461..1314960) /locus_tag="Acear_1233" /note="COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR007197:IPR010722:IPR013785; KEGG: tte:TTE1568 thiamine biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; radical SAM domain protein; SPTR: Q8R9N8 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; PFAM: radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH" /codon_start=1 /transl_table=11 /product="iron-only hydrogenase maturation protein HydG" /protein_id="YP_003827815.1" /db_xref="GI:302391995" /db_xref="GeneID:9513276" /translation="MGSINPAEWAANVIKQDEIDRYLIDGDDFIDDNLIEQQLEEHRD PDPKWIREIIQKSLEIERLEPEETAALLNVEDEELLNEMKEAALEVKKKVYDNRVVTF APLYCSNLCVNNCVYCGFRKDNTNETRKVLNMKKVKEEARNLVKMGHKRSIVVYGEHP ASDADYIAESMEAIYDVKVETKHGYGSLRRVNINAAPMEIEDLKKLWDVGVGTYQVFQ ETYHHETYQKLHPSGPKSNYRWRLYALHRAMEAGIDDVAIGALFGLYDWKFEVMGLLY HAIDLERQFNGVGPHTISFPRLMEADGSPYTQNSKYKVEDEEFKKLITVLRLAVPYTG LIVTARETPEIRREAMQLGCTQTDASTRIGIGAYSEEYTEQEKKRQQFILGDTRDLDT VIKEFAEMGMITSFCTAGYRCGRTGDKIMNLLQEGVEGKFCKLNAVLTFREWLDDFAS EETKKAGEKVIAQELEEIENDSFFTENNLLNEFKNYYERIKNGERDLYI" misc_feature complement(1313464..1314909) /locus_tag="Acear_1233" /note="thiamine biosynthesis protein ThiH; Reviewed; Region: thiH; PRK09613" /db_xref="CDD:181990" misc_feature complement(1314088..1314639) /locus_tag="Acear_1233" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(1314097..1314102,1314310..1314312, 1314379..1314387,1314487..1314492,1314496..1314498, 1314604..1314612,1314616..1314618,1314622..1314624, 1314628..1314630)) /locus_tag="Acear_1233" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" misc_feature complement(1313752..1314081) /locus_tag="Acear_1233" /note="Biotin and Thiamin Synthesis associated domain; Region: BATS; cl06149" /db_xref="CDD:157061" gene complement(1315334..1315957) /locus_tag="Acear_1234" /db_xref="GeneID:9513277" CDS complement(1315334..1315957) /locus_tag="Acear_1234" /note="COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR015797:IPR000086; KEGG: cpf:CPF_1205 NUDIX family hydrolase; PFAM: NUDIX hydrolase; SPTR: C4BWY9 ADP-ribose pyrophosphatase; PFAM: Hydrolase of X-linked nucleoside diphosphate N terminal; NUDIX domain" /codon_start=1 /transl_table=11 /product="NUDIX hydrolase" /protein_id="YP_003827816.1" /db_xref="GI:302391996" /db_xref="GeneID:9513277" /translation="MSKEPKWLEYAKRLQAIAQAGLTYSENKYDRERFEEIREISSSI IKDQTELKKEEISELFMEDAGYPTPKIDVRAAVFKDDKILLVKEKVDGRWSLPGGWAD VGYSLKENLIKEAQEEAGVKIKPQRIISILDRRKHHKKSFPFGMYKIFVECEFLSGEF EKNIETSDSGFFSVTDLPPLSLGRNTKEQIRSCFEARRKDYHKAIFD" misc_feature complement(1315778..1315948) /locus_tag="Acear_1234" /note="Hydrolase of X-linked nucleoside diphosphate N terminal; Region: Nudix_N; pfam12535" /db_xref="CDD:193066" misc_feature complement(1315385..1315753) /locus_tag="Acear_1234" /note="Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly...; Region: Nudix_Hydrolase_14; cd04672" /db_xref="CDD:72908" misc_feature complement(1315595..1315663) /locus_tag="Acear_1234" /note="nudix motif; other site" /db_xref="CDD:72908" gene 1316200..1316673 /locus_tag="Acear_1235" /db_xref="GeneID:9513278" CDS 1316200..1316673 /locus_tag="Acear_1235" /note="KEGG: nth:Nther_2423 hypothetical protein; SPTR: B2A0V8 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827817.1" /db_xref="GI:302391997" /db_xref="GeneID:9513278" /translation="MKLNQLINDKIARGIIAGIIAGIIMEIINYPLYKLELLTLRPID FSIMIIKHHGAKTMLDIVTGFVNHLFFASTSGIILSYILSYSNYRLPLLKGMGIGLGT NIMLLVMASFFKIKAVTNLPTRTILALNISAATAFGLTAGYILNYFHKRFDLALK" gene 1317327..1317914 /locus_tag="Acear_1236" /db_xref="GeneID:9513279" CDS 1317327..1317914 /locus_tag="Acear_1236" /note="KEGG: trq:TRQ2_0374 hypothetical protein; SPTR: C7I833 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827818.1" /db_xref="GI:302391998" /db_xref="GeneID:9513279" /translation="MTKQKKTMIILTIAFLMIQTLTLIDMAKDIKQDHTFELFIITAF FISYTFIELKYNLHLSNYIRGLIILTLISHMQFGQYLNFYTKFFYFDIILHIFGTYSF TLFTYSLLNKTVSKPSLAKNRELILIVLLGISLGTLFEIIKFLIDIIFTPKIPAQTGL IDTNLDMIANIVGAVIAAVHLANTDLIRESQKHKE" gene complement(1317883..1318644) /locus_tag="Acear_1237" /db_xref="GeneID:9513280" CDS complement(1317883..1318644) /locus_tag="Acear_1237" /note="COGs: COG1600 Uncharacterized Fe-S protein; KEGG: dau:Daud_0137 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: B1I0Y2 4Fe-4S ferredoxin, iron-sulfur binding domain protein" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain-containing protein" /protein_id="YP_003827819.1" /db_xref="GI:302391999" /db_xref="GeneID:9513280" /translation="MIKELITKVIKKTVSNSDTKTEYRQPLVGFADADDNDFKKLEEV IAAEHKLPSDILSGAETVISFFIPFAREVIEANQHQKECALKWGIAYHETNELISKIC FKLQKKLAKESIEVGWQSATHNFDEERLISFWSHRSIAKICGLGDFGLNRMLITEQGS AGRYGSLVMDQYVTPSAEFKETPCLYYRDGSCGVCVDRCPKGALTKERFDRHLCYEVL LKNNEIFQAKLKEYDGSFDVCGKCQITPCAFGIPE" misc_feature complement(<1317901..1318638) /locus_tag="Acear_1237" /note="Uncharacterized Fe-S protein [Energy production and conversion]; Region: COG1600" /db_xref="CDD:31788" gene complement(1318668..1318802) /locus_tag="Acear_1238" /db_xref="GeneID:9513281" CDS complement(1318668..1318802) /locus_tag="Acear_1238" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827820.1" /db_xref="GI:302392000" /db_xref="GeneID:9513281" /translation="MQIFNHQVGIEDIFANSEVEKVYNLIKENMKSELKELTIADLLD " gene complement(1318828..1319070) /locus_tag="Acear_1239" /db_xref="GeneID:9513282" CDS complement(1318828..1319070) /locus_tag="Acear_1239" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827821.1" /db_xref="GI:302392001" /db_xref="GeneID:9513282" /translation="MFADLFGKMERIINFFQEVILNNLATGTGQTLINVLERYVHDIN QLGVISFASLVVIIIFMLARIEKTFCWGNWKFTAAR" gene complement(1319104..1319889) /locus_tag="Acear_1240" /db_xref="GeneID:9513283" CDS complement(1319104..1319889) /locus_tag="Acear_1240" /EC_number="3.1.26.4" /note="COGs: COG0328 Ribonuclease HI; InterPro IPR012337:IPR002156; KEGG: cbe:Cbei_2486 ribonuclease H; PFAM: ribonuclease H; PRIAM: Ribonuclease H; SPTR: A6LWB3 Ribonuclease H; PFAM: RNase H" /codon_start=1 /transl_table=11 /product="Ribonuclease H" /protein_id="YP_003827822.1" /db_xref="GI:302392002" /db_xref="GeneID:9513283" /translation="MEMLVFGMEIISQLGDDYKIKVSQKDKSASFWFNPESKELRFCG DNKLSSLLKEKEYQLRKMLHTKRMDTYYVGFELKFCLRTKKDVSGFNDKERLMVVDKR EAEIESYTRENYESNRIPKVYTDGSFLEELDNGAYAVIIKDEAGEYEYYTERVDVKNS NLIELLAAIKGVELLENRERIRIVTDSQYVRKGLAEWIINWRLNDWQTVNGEQVKHID YWKKFDELTKGKYIELEWVKAHADHFENELCDIMARETAENDL" misc_feature complement(1319116..1319529) /locus_tag="Acear_1240" /note="RNase HI family found mainly in prokaryotes; Region: RNase_HI_prokaryote_like; cd09278" /db_xref="CDD:187702" misc_feature complement(order(1319128..1319130,1319182..1319184, 1319332..1319334,1319398..1319400,1319407..1319409, 1319413..1319418,1319506..1319517)) /locus_tag="Acear_1240" /note="RNA/DNA hybrid binding site [nucleotide binding]; other site" /db_xref="CDD:187702" misc_feature complement(order(1319140..1319142,1319332..1319334, 1319398..1319400,1319515..1319517)) /locus_tag="Acear_1240" /note="active site" /db_xref="CDD:187702" gene complement(1319905..1321035) /locus_tag="Acear_1241" /db_xref="GeneID:9513284" CDS complement(1319905..1321035) /locus_tag="Acear_1241" /note="COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: aba:Acid345_0572 STE24 endopeptidase; PFAM: peptidase M48 Ste24p; SPTR: A8CTF2 Ste24 endopeptidase; PFAM: peptidase family M48" /codon_start=1 /transl_table=11 /product="peptidase M48 Ste24p" /protein_id="YP_003827823.1" /db_xref="GI:302392003" /db_xref="GeneID:9513284" /translation="MEELYDPKRRRLAKEYNRIKDRYNKYEIVLRVLFWGIFFGLSLE VRLYHFIADMIGNFDLKLIGFLLGITFLYSIYNWIFDYLLSYRLNRTYELSNQTPKEW LIDKVKVFILTNFFLYIAGRVFLTITIWYPDRWWLPFSIGGIFFILVINFVFPVVLLP LFFELTPYPESSLRERLMELFARAGVEVADIYEFNLSSKMNSANAAVIGMGKTRKIIL GDNLQDRYTNDEIEAVLAHEVGHHANGDMFELLAVEALSLLITVFLVSKFWQPLTGLF GYMEAYSIISLPLFFLMLGILNWLISPLELIFSRQTERKADNFALELIDNPHDLATAF AKLADDSLAKLEYNWYELLFKASHPPINERVEKALYWSDRGN" misc_feature complement(1319938..1320546) /locus_tag="Acear_1241" /note="Peptidase family M48; Region: Peptidase_M48; cl12018" /db_xref="CDD:187163" gene complement(1321066..1323540) /locus_tag="Acear_1242" /db_xref="GeneID:9513285" CDS complement(1321066..1323540) /locus_tag="Acear_1242" /note="COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: cth:Cthe_2086 peptidase U32; PFAM: peptidase U32; SPTR: C7HE01 peptidase U32; PFAM: Collagenase; peptidase family U32" /codon_start=1 /transl_table=11 /product="peptidase U32" /protein_id="YP_003827824.1" /db_xref="GI:302392004" /db_xref="GeneID:9513285" /translation="MYDYQIDKPELLAPVGNRKSLYAAVQNGCDAIYLGGKSFNARKR AENFSIEELKEVFEYAHIRGVRVYVTVNTLYKDQEIKEVLEFIEQIYRYGVDGVIIQD LGAARLINEAIPDLELHASTQMTVHNLEGAKYLEELGFSRVILARELSLAEIEEIIEG TQLEVETFVHGALCISYSGQCLMSSLIGGRSGNRGRCAQPCRLPYTLIDLDTREIIEK EFAESHLLSPKDINTLEILPNLIDAGIASFKIEGRMKRPEYTALVTEKYHRYIDDYVE NREKNYEVNEDDLEEITQIFNRGGFIPGYYLGKDDLDLISHQRPKNWGVKIGEVIEYD NRSGECKIKLNKELDVGDGIEIWTGEDKNPGAILSEFEEISEDIIKIEIDGRIRAGDS VYRTSDEELLTRLQKTYQLPDTIKKIEIFGHLTAKLGEPMELKVWEDAGHYLSVTGDF VCEEAENQPVTEDDLREQLNKLGNTPYEFGSLELDIDDNLFIPISKINELRRRAVEEL NLKRSKQFLSSERSGRINQKDFGLETAERKEKVELTVYLKEIDYLEDILEVGVDRVYC DSQQLELDQVDDWVQQARDYDTEFFIKLPQIARQDRMKEVKEKIDSLEESQVDGYLVP QLGIAYLLQGTEKKLIADYPLNIFNSYSVSHWQLEEYKGVVLSPELTLNEIKDLTEYN NIDKEIIVYGHLPMMITEYCPIGGVVTEFNSERCCNQECLQGDYGLLDRKGMAAPIET DPDNCIVTIYNSQPLYVLDYLSEIMQSGCQSYRLDFVREDKEEAIEILQAYRAKFDNR DFDSPTLKNRMNQKGYTTGHFYRGVK" misc_feature complement(1322479..1323531) /locus_tag="Acear_1242" /note="Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]; Region: COG0826" /db_xref="CDD:31168" misc_feature complement(<1323232..1323474) /locus_tag="Acear_1242" /note="TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate...; Region: TIM_phosphate_binding; cl09108" /db_xref="CDD:195791" misc_feature complement(1322608..1323303) /locus_tag="Acear_1242" /note="Peptidase family U32; Region: Peptidase_U32; cl03113" /db_xref="CDD:194534" misc_feature complement(1321993..1322364) /locus_tag="Acear_1242" /note="Collagenase; Region: DUF3656; pfam12392" /db_xref="CDD:193007" misc_feature complement(1321078..1321734) /locus_tag="Acear_1242" /note="Peptidase family U32; Region: Peptidase_U32; cl03113" /db_xref="CDD:194534" gene 1323739..1324179 /locus_tag="Acear_1243" /db_xref="GeneID:9513286" CDS 1323739..1324179 /locus_tag="Acear_1243" /note="KEGG: cbl:CLK_1627 hypothetical protein; SPTR: B1KVH8 Conserved domain protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827825.1" /db_xref="GI:302392005" /db_xref="GeneID:9513286" /translation="MSKFNPDKLSVEYRQGITPTNPVIPRRYTLTHSDETGELFLTIG YEYAYDMINPTRDEVIGEWNYDTNYIFQATVYVGGNNREEVDRRNRIFIQELPLALKA IRYGDRKLFQTHPDLDKASIYIYFRSVYSEYNRTEYWGSFSDYK" misc_feature 1323742..1324176 /locus_tag="Acear_1243" /note="Staygreen protein; Region: Staygreen; pfam12638" /db_xref="CDD:193116" gene complement(1324454..1324939) /locus_tag="Acear_1244" /db_xref="GeneID:9513287" CDS complement(1324454..1324939) /locus_tag="Acear_1244" /note="COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR008254:IPR001226:IPR018087; KEGG: cdf:CD0810 flavodoxin; PFAM: flavodoxin/nitric oxide synthase; SPTR: Q18A03 Putative flavodoxin; PFAM: Flavodoxin" /codon_start=1 /transl_table=11 /product="flavodoxin/nitric oxide synthase" /protein_id="YP_003827826.1" /db_xref="GI:302392006" /db_xref="GeneID:9513287" /translation="MKLAVLYHSETGNTERVAEIVAQGANEVDNVEAKTMGIEELDDE FVEEAEAVIFGTPTYLANFSWQTKKWFDTEMDYDLSGKLGAVFATENYLGGGADMALL TMIGHMLVRGMVIYSGGAAEGKPYTHYGAVCIQDGDEDQQERAEIFGERVASKALELF A" misc_feature complement(1324457..1324939) /locus_tag="Acear_1244" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:193819" gene 1325064..1325558 /locus_tag="Acear_1245" /db_xref="GeneID:9513288" CDS 1325064..1325558 /locus_tag="Acear_1245" /note="KEGG: nth:Nther_1566 hypothetical protein; SPTR: B2A437 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827827.1" /db_xref="GI:302392007" /db_xref="GeneID:9513288" /translation="MDYYWLIQSTAYWSLTLFIVPYKYIKRLFPFGFLGGFIYTWIVQ YTAVQILNLWRYTPTFLTIYDIPFFFVISWFGVTLLYGYFLINYSKYQVYVITFFVSW TTFTNYFANQAGVFAMTNWSLSLTLMFAVFSHIFLLYLLKLMNGVEDIGTKKDMLNLK DNDK" gene complement(1325695..1326996) /locus_tag="Acear_1246" /db_xref="GeneID:9513289" CDS complement(1325695..1326996) /locus_tag="Acear_1246" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: tex:Teth514_2350 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003827828.1" /db_xref="GI:302392008" /db_xref="GeneID:9513289" /translation="MKLAKHFIHKPNQTQQVVLGCLAYANARLYNIGNYQRKDWSKDS AKNYPDWYKQKKQLKDNFWYKNLPSQTAQETLKILADNWDSFYQSMEDYQDNPDKYNG KPNPPNYKPKDSKFNLRYLNNGFKIIDGKLRLSIPKQLKKYLKEEYSITNKFLWIRVP NELLSSNRDVLNSTTRIEFKPLSDDTYKVILTYKVDTPTIKEDDGNYLSIDLGINNLM TCYSNQNQESFIIDGGQYLAINRYFDKKIKHYQSILNGQGKKTSKRIQNLYKKRRKQL FHLIHSATKKVVNYCVENNISRVIVGDIKNIRDDADLGKQNNQKLHKLPFDIIYHQLE YKLNLQGITLIKKSEKYTSQCSPYSKKVTKKYANKSNRVKRGLYIDKDNNQAFNADSI GAFNILRKYLQQRRKGPDITLQVKGLSNPVKYNWNNHQFAA" misc_feature complement(1326073..1326810) /locus_tag="Acear_1246" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature complement(1325938..1326183) /locus_tag="Acear_1246" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature complement(1325797..1326021) /locus_tag="Acear_1246" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 1327437..1328129 /locus_tag="Acear_1247" /db_xref="GeneID:9513290" CDS 1327437..1328129 /locus_tag="Acear_1247" /note="COGs: COG2930 conserved hypothetical protein; InterPro IPR007461; KEGG: kol:Kole_1819 protein of unknown function DUF500; PFAM: protein of unknown function DUF500; SPTR: C1TLZ7 Uncharacterized conserved protein; PFAM: Family of unknown function (DUF500)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827829.1" /db_xref="GI:302392009" /db_xref="GeneID:9513290" /translation="MKTNKLWILIICLVLTISLGVNTVKADNVVPNDRIEEATQILKE ISDQKDADSLAYLLKEAKGVVIFPKVIKGGFMFGGRYGEGLLLKRDNNNWYGPYFIEM KGLSYGFQIGVQSIGLVLVITNERGLSNFKKDNLTLGGGLSVAAGPVGRSTEAATDIN LEAAIYSYSMSKGAFAGASLEGAKVSKDKEENKSYWGKSLISDEIFTKRAYDQRITPL INTIEELAAAAD" misc_feature 1327545..1328108 /locus_tag="Acear_1247" /note="Family of unknown function (DUF500); Region: DUF500; cl01109" /db_xref="CDD:194038" gene complement(1328148..1328549) /locus_tag="Acear_1248" /db_xref="GeneID:9513291" CDS complement(1328148..1328549) /locus_tag="Acear_1248" /EC_number="1.8.4.11" /note="COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR011057:IPR002579; KEGG: gem:GM21_0248 methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B; PRIAM: peptide-methionine (R)-S-oxide reductase; SPTR: C6DY58 methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase" /codon_start=1 /transl_table=11 /product="methionine-R-sulfoxide reductase" /protein_id="YP_003827830.1" /db_xref="GI:302392010" /db_xref="GeneID:9513291" /translation="MKDNKIEKSKAEWEKILTDDEYRVLREQGTEPAFDNEFYDNFKD GIYLCAGCGNELFSAEDKFKSGTGWPSYTKPIDEEAVETSIDKSLLQTRVEVHCNRCG GHLGHIFEDGPEPTGLRYCINSTALNFKEEK" misc_feature complement(1328154..1328537) /locus_tag="Acear_1248" /note="SelR domain; Region: SelR; cl00369" /db_xref="CDD:185947" gene 1329311..1330078 /locus_tag="Acear_1249" /db_xref="GeneID:9513292" CDS 1329311..1330078 /locus_tag="Acear_1249" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827831.1" /db_xref="GI:302392011" /db_xref="GeneID:9513292" /translation="MKKIALCLVLSLIILSFTSVTMAKPKKPKHKHKKKHPHSNSGNP EVMEEIFNIKKEKLKHFNNFNLEPEELSLVFYLHSVSNRPIGNKEIQFILKHKEDWDK ITWYFGLPPIMFEDEIITFRHPPTSKQLFLPVGKKRYEAARRGVVEEKLEVKHNKYEY KYRNKRSKVKEKIEIKHNKYNYHYTNKRLGIKETLQVKYPSYRYTYHYKNKRTGERIR KRGRGRPLNPRIFYHKLRKRRQQETEFHLSVQINIDL" gene complement(1330165..1330836) /locus_tag="Acear_1250" /db_xref="GeneID:9513293" CDS complement(1330165..1330836) /locus_tag="Acear_1250" /note="InterPro IPR013216; KEGG: sse:Ssed_3294 6-O-methylguanine DNA methyltransferase; PFAM: methyltransferase type 11; SPTR: A8FYH5 6-O-methylguanine DNA methyltransferase; PFAM: methyltransferase domain" /codon_start=1 /transl_table=11 /product="methyltransferase type 11" /protein_id="YP_003827832.1" /db_xref="GI:302392012" /db_xref="GeneID:9513293" /translation="MKKNTNVDKEILNKQNQHWENTFTKKSDMFGTEPSIPAQKATKI FKKEGKKELLELGGGQGRDTIFFAQNGFQVTVLDYCETGVETIKQKAQKMGLSESITA ICHDVRKPLPFDDESFDCCYSHMLYCMALTTSELEFLSDEIRRVLKLGGLNVYTVRNT NDPDYGTGIHRGEDIYEVGEFVIHFFDKEKVDHLAKGFEIINIDEFEEGGLPRRLFRV TLKKE" misc_feature complement(1330381..1330656) /locus_tag="Acear_1250" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" misc_feature complement(<1330183..>1330506) /locus_tag="Acear_1250" /note="hypothetical protein; Provisional; Region: PRK08317" /db_xref="CDD:181382" gene complement(1330897..1331475) /locus_tag="Acear_1251" /db_xref="GeneID:9513294" CDS complement(1330897..1331475) /locus_tag="Acear_1251" /note="COGs: COG5423 metal-binding protein; Contains selenocysteine; InterPro IPR019271; KEGG: rci:RRC508 hypothetical protein; PFAM: protein of unknown function DUF2284, metal-binding; SPTR: Q1Q4I7 Putative uncharacterized protein; PFAM: Predicted metal-binding protein (DUF2284)" /codon_start=1 /transl_except=(pos:complement(1331086..1331088),aa:Sec) /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827833.1" /db_xref="GI:302392013" /db_xref="GeneID:9513294" /translation="MDDFIILNLMRWNIVSENFNCLVNKALELGVEEAKIIGTETIFV GHWVQWKCQYGCSLYDEDASHRPGAPDVEEMEKMLKEYNKALLIHGFKGPLLSELAVK LEHEAIKQGYYKAFVLISLPFSNSGSTUQSEEGETQDESQLNEEEEASIRPMMEACGI DVFKTVRANGFEIATTKETHGRWNYFALVLLE" misc_feature complement(1330903..1331379) /locus_tag="Acear_1251" /note="Predicted metal-binding protein (DUF2284); Region: DUF2284; cl02248" /db_xref="CDD:154819" gene complement(1331485..1331604) /locus_tag="Acear_1252" /pseudo /db_xref="GeneID:9513295" gene complement(1331615..1332001) /locus_tag="Acear_1253" /db_xref="GeneID:9513296" CDS complement(1331615..1332001) /locus_tag="Acear_1253" /note="COGs: COG3976 conserved hypothetical protein; InterPro IPR007329; KEGG: hor:Hore_04000 FMN-binding domain protein; PFAM: FMN-binding domain protein; SPTR: B8D1T2 FMN-binding domain protein; PFAM: FMN-binding domain" /codon_start=1 /transl_table=11 /product="FMN-binding domain protein" /protein_id="YP_003827834.1" /db_xref="GI:302392014" /db_xref="GeneID:9513296" /translation="MKRIKLKKLIYLSLAVVIILATIGYRGYMRKVRNIEINDVNLTE IEAGEYVGEYATKLGSAKVKVTVKDHQIIRVDILEHNHVQGKKAEKVIYSVIEEQTPN VDAIAGATGSSKVVCKAIENALSNQK" misc_feature complement(1331630..>1331920) /locus_tag="Acear_1253" /note="FMN-binding domain; Region: FMN_bind; cl01081" /db_xref="CDD:194030" gene complement(1332035..1332232) /locus_tag="Acear_1254" /db_xref="GeneID:9513297" CDS complement(1332035..1332232) /locus_tag="Acear_1254" /note="COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR015797:IPR000086:IPR020084; KEGG: hor:Hore_13970 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: B8CXX7 NUDIX hydrolase; PFAM: NUDIX domain" /codon_start=1 /transl_table=11 /product="NUDIX hydrolase" /protein_id="YP_003827835.1" /db_xref="GI:302392015" /db_xref="GeneID:9513297" /translation="MKYPEPTVGAVIFNPDDEILLCKSNKWDNKYVIPGGHIELGERM EKALIREIKEEKGKLIFLSNN" misc_feature complement(<1332062..1332223) /locus_tag="Acear_1254" /note="Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or...; Region: Nudix_Hydrolase; cl00447" /db_xref="CDD:189099" misc_feature complement(order(1332065..1332091,1332119..1332127)) /locus_tag="Acear_1254" /note="nudix motif; other site" /db_xref="CDD:72880" gene complement(1332309..1334210) /locus_tag="Acear_1255" /db_xref="GeneID:9513298" CDS complement(1332309..1334210) /locus_tag="Acear_1255" /note="COGs: COG0326 Molecular chaperone HSP90 family; InterProIPR020568:IPR003594:IPR020576:IPR001404:IPR 020575; KEGG: pmo:Pmob_1086 heat shock protein 90; PFAM: heat shock protein HSP90-like; ATP-binding region ATPase domain protein; SPTR: C4V4F3 Chaperone HtpG; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein" /codon_start=1 /transl_table=11 /product="heat shock protein HSP90" /protein_id="YP_003827836.1" /db_xref="GI:302392016" /db_xref="GeneID:9513298" /translation="MTAEEKKFQTETQKILDLMINSIYTNQEIFLRELIANASDAIDK VKFQSLTESDILEGDSDFEIWLDVDEENDVFTIKDNGIGMTYDEVVENIGTIAQSGSQ DFLQKLQERQAAADDEALDLIGQFGVGFYSSFMVADKVTLITRAPKEDKGVKWESTGD GTYTIEEVDKPKRGTTIKLQLRDEFTADGEELDITNRRNIERLVQKHSNYVAYPIKMK CYEEDDEGEVTEQIKTLNDMKPLWIRNKSDIEEEDYNEFYKEVFTDWADPLEVIHSKV EGLVKYSTLLFIPQQAPSNIFSDDFDQGLRLYSKNNFVMDNCSKLLPDYLRFVRGLVD SPDFTLNLSRQVLQDDKQLKIISKNLKKKVLKRLKSMLGDDREKYKEFWNEFGQLIKG GINMTHGKEQDKLVELLIFPSSHSDSEMTTLAEYVERMPEDQDVIYYVTGEDETTVEK LPQMELLQEKGLEVLYFFDEVDEFVINNLQEYDDIEFKSVLRGDLDLDDADDDIDADE DEVEELLEDIKGHLDDKVSDVRLSKRLKSSAVCLVSGDVGLSMSMEKVLEKMDQNMGQ AQRILEINPQHELFSKLKEIHTTEGNSDRLAEYSELLYSLASLVEGFTPEDPVEFSDK ITELMVEAK" misc_feature complement(1332315..1334210) /locus_tag="Acear_1255" /note="heat shock protein 90; Provisional; Region: PRK05218" /db_xref="CDD:179965" misc_feature complement(1333659..1334129) /locus_tag="Acear_1255" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cl00075" /db_xref="CDD:193644" gene complement(1334421..1335446) /locus_tag="Acear_1256" /db_xref="GeneID:9513299" CDS complement(1334421..1335446) /locus_tag="Acear_1256" /note="KEGG: nth:Nther_0757 hypothetical protein; SPTR: C0GIJ6 Putative uncharacterized protein; PFAM: protein of unknown function (DUF3231)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827837.1" /db_xref="GI:302392017" /db_xref="GeneID:9513299" /translation="MSILRTYILDYIDLIMFIEGVVAIIFSFFKKDQKLSVLEAHSLW NLLSSKYHIINNVQLWHTYAHDKDLKKLMKEFLEDLDEHTEQLEKELERYSIEAPPRA KHHAHGDVNSQMLCDEIIGKDYFTFLQRMVELVLFSIQYSYFNDDLYKFFQDFAKHAI EQTDRILKYLKTKGWIDIPPNYLNVPEDVDEKLGSIEAFHLWTHTHYRYVNIEETLRW KEHVHDAEFKKILERGLKKLNEQVEVLEKELEHFGLPVPKGPPNVVKTNDKATHKDEY IFKSLFIGLQWAGTLHAKAFQQCITNDRIRELFKDYLYEELDMLQQISKYGKLKGWLP TPPKYIE" misc_feature complement(1334436..1334876) /locus_tag="Acear_1256" /note="Protein of unknown function (DUF3231); Region: DUF3231; pfam11553" /db_xref="CDD:151989" gene 1335623..1336327 /locus_tag="Acear_1257" /db_xref="GeneID:9513300" CDS 1335623..1336327 /locus_tag="Acear_1257" /note="COGs: COG1378 transcriptional regulator protein; InterPro IPR002831; KEGG: drm:Dred_3250 transcriptional regulator, TrmB; PFAM: transcriptional regulator TrmB; SPTR: A4J9J7 transcriptional regulator, TrmB; PFAM: Sugar-specific transcriptional regulator TrmB; Archaeal transcriptional regulator TrmB" /codon_start=1 /transl_table=11 /product="TrmB family transcriptional regulator" /protein_id="YP_003827838.1" /db_xref="GI:302392018" /db_xref="GeneID:9513300" /translation="MDLKELLTYFNLTRQEAAIYLSLTVNGPMTGYEVAKETGISRSS VYTNLANLVDKGAAYLIEDKAKQYTPAAIDEFCSNKIRELKEIKKQLIENMPQRQEED GGYITIKGRKNILNKIKNMIKQAEKRIYISSSDDILKTVLPYLEDALARELKVVIITQ LPLELNDAVIYQTERKEDQIRLIVDSVEVLTGEIINENNSTCLYSKKENLVNLFKESL RNEIKLIKLTEGDDLE" misc_feature 1335641..1335832 /locus_tag="Acear_1257" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature 1335932..1336294 /locus_tag="Acear_1257" /note="Middle phospholipase D-like domain of the transcriptional regulator TrmB and similar proteins; Region: PLDc_like_TrmB_middle; cd09124" /db_xref="CDD:197223" misc_feature order(1335998..1336006,1336010..1336012,1336073..1336084, 1336088..1336090,1336094..1336096,1336121..1336123, 1336127..1336129,1336133..1336135,1336169..1336171, 1336175..1336177,1336262..1336267,1336274..1336276, 1336283..1336288) /locus_tag="Acear_1257" /note="C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:197223" misc_feature order(1336274..1336279,1336286..1336288) /locus_tag="Acear_1257" /note="sugar binding site [chemical binding]; other site" /db_xref="CDD:197223" gene 1336324..1337562 /locus_tag="Acear_1258" /db_xref="GeneID:9513301" CDS 1336324..1337562 /locus_tag="Acear_1258" /note="COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR009006:IPR000183:IPR002986; KEGG: drm:Dred_3249 Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: A4J9J6 Diaminopimelate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase" /codon_start=1 /transl_table=11 /product="Orn/DAP/Arg decarboxylase 2" /protein_id="YP_003827839.1" /db_xref="GI:302392019" /db_xref="GeneID:9513301" /translation="MKKPFVSLEELKEITEEYPTPFHLYDEQGIRENARKLNEAFAWN DGFKEYFAVKATPNPTILKILQEEGCGVDCSSLTELMMSDKVGFSGDDIMFSSNVTPK EDYELASKLDAIINLDDITHIDFLEEVAGIPERISCRYNPGNNFKSDNDIMDNPAEAK YGFTYPQLVEGFKKLQDKGAKEFGLHAFLASNTTADEYYPALARILFETAVKLNKETG AEIGFINLSGGIGIPYRPEEEPADIMAIGEGVREAYEEILVPAGLDDVAIFTELGRFM LGPYGCLVTTAIHKKHIYKDYVGLDACAADLMRPAMYGAYHHISVMGKEDQPHDHKYD VTGGLCENNDKFAIDRMLPKVDKGDLLVIHDTGAHGYAMGYNYNGKLRSAEVLLQEDG STKLIRRAETPDDYFATLDI" misc_feature 1336333..1337487 /locus_tag="Acear_1258" /note="Diaminopimelate decarboxylase [Amino acid transport and metabolism]; Region: LysA; COG0019" /db_xref="CDD:30369" misc_feature 1336375..1337487 /locus_tag="Acear_1258" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase; Region: PLPDE_III_DapDC; cd06828" /db_xref="CDD:143501" misc_feature order(1336477..1336479,1336483..1336485,1336540..1336542, 1336609..1336611,1336738..1336740,1336879..1336881, 1336885..1336887,1336894..1336896,1337005..1337010, 1337134..1337145,1337248..1337250,1337260..1337262, 1337341..1337343,1337428..1337430,1337440..1337442, 1337452..1337454) /locus_tag="Acear_1258" /note="active site" /db_xref="CDD:143501" misc_feature order(1336477..1336479,1336483..1336485,1336540..1336542, 1336609..1336611,1336738..1336740,1336879..1336881, 1336885..1336887,1336894..1336896,1337005..1337010, 1337134..1337145,1337341..1337343,1337428..1337430) /locus_tag="Acear_1258" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143501" misc_feature order(1336483..1336485,1336885..1336887,1336894..1336896, 1337143..1337145,1337248..1337250,1337260..1337262, 1337341..1337346,1337428..1337430,1337440..1337442, 1337452..1337454) /locus_tag="Acear_1258" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143501" misc_feature order(1336483..1336485,1337341..1337343) /locus_tag="Acear_1258" /note="catalytic residues [active]" /db_xref="CDD:143501" misc_feature order(1336498..1336503,1336546..1336551,1336555..1336560, 1336615..1336623,1336633..1336635,1336675..1336677, 1336684..1336686,1336798..1336809,1337188..1337190, 1337194..1337196,1337212..1337214,1337218..1337220, 1337332..1337349,1337353..1337355,1337437..1337445, 1337449..1337460,1337467..1337469) /locus_tag="Acear_1258" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143501" gene complement(1337629..1339800) /locus_tag="Acear_1259" /db_xref="GeneID:9513302" CDS complement(1337629..1339800) /locus_tag="Acear_1259" /note="COGs: COG5002 Signal transduction histidine kinase; InterProIPR003594:IPR009082:IPR000014:IPR005467:IPR 000700:IPR013767:IPR003661:IPR001610:IPR004358; KEGG: hor:Hore_07420 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: B8CW30 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box" /codon_start=1 /transl_table=11 /product="multi-sensor signal transduction histidine kinase" /protein_id="YP_003827840.1" /db_xref="GI:302392020" /db_xref="GeneID:9513302" /translation="MKKLNVESDISKLKYLVIIFGLSIFFIAPYLSLSLQGISCMILV GLGAYFGHLKGGIVAAFLLSQGLVFGALFKYQSYLRERLKEQSLELTMEKDKLNKILY TTMDGFLILNTEGEIIEANKSYQEMIGYSREELLEMTIDDIDITKNKEEVKDHMERIM TDEQDRFETKCSCKNGEVIDVEVSTTYIDDLEEPIFVSFDRDITERKKTEQTLKESEA KFRSYIDNAPYGVFVINSRGEYIEVNEAACELSGYSKEELLNMSIEDVTVDRQKAKRH LVQLLEVGELSLEIMLLKKDGSKFHANINAVKASENRLLGFVEDITARKEAEEKVKEE RDKLQKYFDITEVIVVNLDRTGKVELLNRKGCEILGVKEEEVLGHDWTENFVKEEDSA ETKQIINSLLEGEIINDKNRIITKSGEERKILWHNAVLKDEQSQMNKILSTGIDITEV ESLKEKVAYNKLKMEFFANISHEFRTPLNLIFSAQQMLEMYQKKLEPEQSSKMGKYTT IIKQNGRRLLRLANNLIDITKMDSGSFELELENCNIVSLVRKVACSVAEHIEYKELEF EFDSEIEEKIIACDPFNIERVILNLLSNAVKFTDIGDKVSVNIYTEEGKVLISVKDTG IGISQEKQELIFKRFGQADKSFTRSNEGTGIGLSIVKSIVELHNGQISVESEEGVGSE FIIELSDRKLAEGSSFQTNDRYNSQEIIDRIDVEFADIYDL" misc_feature complement(<1339372..1339617) /locus_tag="Acear_1259" /note="Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:33622" misc_feature complement(1339192..1339485) /locus_tag="Acear_1259" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(1338835..1339482) /locus_tag="Acear_1259" /note="FOG: PAS/PAC domain [Signal transduction mechanisms]; Region: AtoS; COG2202" /db_xref="CDD:32384" misc_feature complement(order(1339273..1339275,1339288..1339290, 1339363..1339374,1339411..1339413,1339429..1339431, 1339441..1339443)) /locus_tag="Acear_1259" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(1339246..1339248,1339252..1339254, 1339336..1339338,1339345..1339347,1339369..1339371, 1339381..1339383)) /locus_tag="Acear_1259" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(1337794..1339143) /locus_tag="Acear_1259" /note="nitrogen fixation negative regulator NifL; Region: nifL_nitrog; TIGR02938" /db_xref="CDD:131984" misc_feature complement(1338838..1339122) /locus_tag="Acear_1259" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(order(1338910..1338912,1338925..1338927, 1338997..1339005,1339042..1339044,1339060..1339062, 1339072..1339074)) /locus_tag="Acear_1259" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(1338883..1338885,1338889..1338891, 1338970..1338975,1338982..1338984,1339000..1339002, 1339012..1339014)) /locus_tag="Acear_1259" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(1338460..1338762) /locus_tag="Acear_1259" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(order(1338547..1338549,1338562..1338564, 1338640..1338651,1338688..1338690,1338706..1338708, 1338718..1338720)) /locus_tag="Acear_1259" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(1338520..1338522,1338526..1338528, 1338610..1338615,1338622..1338624,1338646..1338648, 1338658..1338660)) /locus_tag="Acear_1259" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(1338214..1338423) /locus_tag="Acear_1259" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature complement(order(1338229..1338231,1338241..1338243, 1338250..1338252,1338262..1338264,1338271..1338273, 1338283..1338285,1338349..1338351,1338358..1338360, 1338370..1338372,1338379..1338381,1338391..1338393, 1338403..1338405)) /locus_tag="Acear_1259" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature complement(1338385..1338387) /locus_tag="Acear_1259" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature complement(1337791..1338051) /locus_tag="Acear_1259" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(1337830..1337841,1337920..1337925, 1337929..1337931,1337935..1337937,1337941..1337943, 1338010..1338012,1338019..1338021,1338031..1338033)) /locus_tag="Acear_1259" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(1338019..1338021) /locus_tag="Acear_1259" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(1337833..1337835,1337839..1337841, 1337923..1337925,1337929..1337931)) /locus_tag="Acear_1259" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(1340222..1341235) /locus_tag="Acear_1260" /db_xref="GeneID:9513303" CDS complement(1340222..1341235) /locus_tag="Acear_1260" /note="KEGG: tle:Tlet_1198 hypothetical protein; SPTR: A8F6H6 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827841.1" /db_xref="GI:302392021" /db_xref="GeneID:9513303" /translation="MSLTSFIKKADIRKNIDKTFNKPSFSQSNIEMKVKPPKAYSGKD YMLIGTAFDYLFRFYLKHEYKDNAKDSHWIAHTSLYLLSNKISNIDILFPQNFLKEMG IVIPDMEGFEEVPGVENHGGFIIYDNIEYDKIDFDKIVKYIMEGGELTCSSKIEKQFR RTFNAIFNAEKVYNKYVKDGKMNEEVIKAIIDLAKIDDYLRGRKFNETLGEYKKEYIE DLKNLYHAIPEQNNLANKVYLNPTFGKGSKLVNGADADLIINDTLIDVKTTKNLNLTA KQWRQLVGYLTLIDFQNKFSINKAGIYFSRYGYFYTFDACKIYNSDEYGKFKKWFIDK AKS" gene complement(1342321..1343613) /locus_tag="Acear_1261" /db_xref="GeneID:9513304" CDS complement(1342321..1343613) /locus_tag="Acear_1261" /note="COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477:IPR013597; KEGG: dae:Dtox_1820 RNA-directed DNA polymerase (reverse transcriptase); PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; SPTR: B3CMG0 Putative reverse transcriptase; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain" /codon_start=1 /transl_table=11 /product="RNA-directed DNA polymerase (Reverse transcriptase)" /protein_id="YP_003827842.1" /db_xref="GI:302392022" /db_xref="GeneID:9513304" /translation="MIKAPISLQDLRKRIYLKSKKEESHKFWGLYVHVCKLDTLLKAY RIARKKNGSSGVDGITFEDIEGIGVLKYLKKIREELVNETYKPQENRKQEIPKGNGKV RVLGIPTIKDRIVQGALKLILEPIFEADFQESSYGYRPKRTAHQAVKKIEKAIVSGKR KVIDLDLSSYFDTVKHHILLAKIAKRVIDKEVMHLIKLMLKASGKEGVPQGGVISPLF ANLYLNEVDRMLERAKEVTKSKGKYTELEYARFADDIVIAVSSHPSMNWLLSKVIQRL KEELDKIKVKVNKEKTKVVNLEKGERISFLGFTLKRRKTFSGKWGVLTVPQMKKRTAL LQKIKEVIKRHRTTGIFELMITELNTILRGWVNYFSIGNSENCFSYVKDYVENKVRRY LMKQRGKKGYGWKRWSSDWLYNEIGLFDNYKLARYNES" misc_feature complement(1342684..1343343) /locus_tag="Acear_1261" /note="RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable...; Region: RT_G2_intron; cd01651" /db_xref="CDD:73157" misc_feature complement(1342684..1343331) /locus_tag="Acear_1261" /note="Reverse transcriptase (RNA-dependent DNA polymerase); Region: RVT_1; pfam00078" /db_xref="CDD:143860" misc_feature complement(order(1342693..1342698,1342852..1342857, 1342861..1342863,1342981..1342986,1343101..1343118)) /locus_tag="Acear_1261" /note="putative active site [active]" /db_xref="CDD:73157" misc_feature complement(order(1342855..1342857,1342984..1342986, 1343101..1343118)) /locus_tag="Acear_1261" /note="putative NTP binding site [chemical binding]; other site" /db_xref="CDD:73157" misc_feature complement(1342981..1342983) /locus_tag="Acear_1261" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:73157" misc_feature complement(1342393..1342617) /locus_tag="Acear_1261" /note="Group II intron, maturase-specific domain; Region: GIIM; pfam08388" /db_xref="CDD:149448" gene complement(1344060..1344152) /locus_tag="Acear_1262" /db_xref="GeneID:9513305" CDS complement(1344060..1344152) /locus_tag="Acear_1262" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827843.1" /db_xref="GI:302392023" /db_xref="GeneID:9513305" /translation="MSRTLGTLYVQRSWTYPMGVSPIRVKVKTL" gene complement(1344268..1345404) /locus_tag="Acear_1263" /db_xref="GeneID:9513306" CDS complement(1344268..1345404) /locus_tag="Acear_1263" /note="KEGG: hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827844.1" /db_xref="GI:302392024" /db_xref="GeneID:9513306" /translation="MKIKVMRKTNLWRCFNILGIILDFIVSNLGKIYGKLNKCKHKLR LFLFNKNLICNSQIKDKEAKNIAYSILSSKILKAVPYKNINLNEFIAVFTQVNKSNNG YDHKICILRKLGENYTSVWQKKSSFLIESLNVEDIDNDGEEEIVFIEHGSGTGSWIRK LNIYSMKKDKLYKVEEYQDYNSLSSSYSPTVKTNFKLNTQIGKAIEKTAKKYGFLKKR IVDLEDKKFAHYKWHEMNGKKRNGFVNLKYYNGKPKYENELHKKLEIDDLIWYSYVME PLYGYIKSEDKHFVAYAPSFIQNFVDCFVSKNRERLFFTCCNDEGIYDFEFDNSNKEI GEIKYYTHYNNKKIPKVKSLESIANNKLLINKDMVISIGDLNKT" gene 1345658..1346077 /locus_tag="Acear_1264" /pseudo /db_xref="GeneID:9513307" gene complement(1346079..1347278) /locus_tag="Acear_1265" /db_xref="GeneID:9513308" CDS complement(1346079..1347278) /locus_tag="Acear_1265" /note="COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594:IPR009082:IPR000014:IPR005467:IPR 000700:IPR013656:IPR003661:IPR004358; KEGG: hor:Hore_07420 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: B8CW30 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold" /codon_start=1 /transl_table=11 /product="PAS/PAC sensor signal transduction histidine kinase" /protein_id="YP_003827845.1" /db_xref="GI:302392025" /db_xref="GeneID:9513308" /translation="MELKELLKKNFEEEGVDIEETLTNVLDNLHDIVIYQNLEREILW ANETAIEEFNEPFDEIKERHCYELVHDSSQLCEDCLVEKAEATGEIVEREKINPNGNL YLVRVYPVKNKEKEIKGIIRISLNITKRRALKERLEQNRLRTELFANLSHELKTPLNL MFSGMQLLKLNLEKNEDEDKYMEYLNTIKRNTNRLLKLVENLVDINKLDSRSYDLSFQ NCDIVSLVEKVFFSVKEYAENKKRELEFDSEIEEKVIACDSFNMERVMLNLFSNAIKF TDKGDKISMYLSDEGDNISISVKDTGIGIPKDKQEIIFERFGQVDKSFTRNNEGSGIG LSLVNLIIERHDGEIDLHSEYGSGSEFIIKLPAQKLAQEDAERKKIEIHDSIINKIDM EFSDIYC" misc_feature complement(1346196..1347194) /locus_tag="Acear_1265" /note="phosphate regulon sensor kinase PhoR; Region: phoR_proteo; TIGR02966" /db_xref="CDD:163090" misc_feature complement(1346898..1347194) /locus_tag="Acear_1265" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(order(1346979..1346981,1347066..1347077, 1347114..1347116,1347132..1347134,1347144..1347146)) /locus_tag="Acear_1265" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(1346958..1346960,1346964..1346966, 1347036..1347041,1347048..1347050,1347072..1347074, 1347084..1347086)) /locus_tag="Acear_1265" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(1346658..1346861) /locus_tag="Acear_1265" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature complement(order(1346673..1346675,1346685..1346687, 1346694..1346696,1346706..1346708,1346715..1346717, 1346727..1346729,1346793..1346795,1346808..1346810, 1346817..1346819,1346829..1346831,1346841..1346843)) /locus_tag="Acear_1265" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature complement(1346823..1346825) /locus_tag="Acear_1265" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature complement(1346184..1346495) /locus_tag="Acear_1265" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(1346196..1346198,1346202..1346207, 1346220..1346222,1346226..1346228,1346274..1346285, 1346364..1346369,1346373..1346375,1346379..1346381, 1346385..1346387,1346454..1346456,1346463..1346465, 1346475..1346477)) /locus_tag="Acear_1265" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(1346463..1346465) /locus_tag="Acear_1265" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(1346277..1346279,1346283..1346285, 1346367..1346369,1346373..1346375)) /locus_tag="Acear_1265" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(1347491..1349878) /locus_tag="Acear_1266" /db_xref="GeneID:9513309" CDS complement(1347491..1349878) /locus_tag="Acear_1266" /note="COGs: COG1067 ATP-dependent protease; InterPro IPR020568:IPR008269:IPR001984; KEGG: hor:Hore_03380 peptidase S16 lon domain protein; PFAM: peptidase S16 lon domain protein; SPTR: B8D1M2 peptidase S16 lon domain protein; PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related ATP-dependent protease" /codon_start=1 /transl_table=11 /product="peptidase S16 lon domain protein" /protein_id="YP_003827846.1" /db_xref="GI:302392026" /db_xref="GeneID:9513309" /translation="MVDDKRLTAVQLKCNCKPERFDFETTDELEPITGELIGQNRAVK AMDLGLKVEQEGYNIFISGIPGTGKTTYAKTLARGKSKDAEVPDDICYVYNFFDSEKP RALNLPSGQGANLQEDMDKLIEELKTEIPQVFAGEEYKQEKNEIMNEYRQKSNQIMED FEKDVKERGFTLQNTGDNLVPVPLNEEEEPIEQNEFQQLDEEKRSNLREKSQQIQDEM EQVMRKINNLKSEAKKELKNKEKKIALSVIQPIIASLKDEYEDYPQVIEYLKEVQKDI TENLDQFRNKQKDNTTPTISLTQMQKEDESFFTRYKVNLLVDNSNLEGAPVVYEPNPT YYNLFGKIEGKSQLGTITTDFTMIKKGAVHEANGGYLIVKAKDVLTNALAWETMKRIL LNQEIVVENIGEQYRSMPITTLKPEAIPVDIKIIMIGNPYIYQLLYNYDEEFKKLFKV KADFDVQMERSEENMEKFASFISSISDSEDIRHFTVGAVSRIIEYSSRLTDDREKLST QFNEILELLFEANAWAEMENDDEYINRNDVIKAIEEKEYRYNLTEEKIQEMIDRGHIL VDVEDKEVGQINGLSVYQTGQYSFGRPTRITARTFLGQKGVVNIEREVDMSGKIHNKG VMILSGFLGGKYAQKQPLSLSASLTFEQNYGGIDGDSASCAELIALLSAIADIPVKQD LAITGSMNQKGMVQPIGGVNEKIEGFYKVCKLKGLTGSQGVVIPKQNEDNLMLKPEIV EAVSSGEFNIYSVEEIDEAIELMMGVEAEKVHSQVEEELKQMANKATEFVDKEDK" misc_feature complement(<1349513..1349815) /locus_tag="Acear_1266" /note="lon-related putative ATP-dependent protease; Region: lon_rel; TIGR00764" /db_xref="CDD:162029" misc_feature complement(1347530..1349053) /locus_tag="Acear_1266" /note="Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones]; Region: LonB; COG1067" /db_xref="CDD:31266" misc_feature complement(1347587..>1347907) /locus_tag="Acear_1266" /note="Lon protease (S16) C-terminal proteolytic domain; Region: Lon_C; pfam05362" /db_xref="CDD:191262" gene complement(1350032..1350994) /locus_tag="Acear_1267" /db_xref="GeneID:9513310" CDS complement(1350032..1350994) /locus_tag="Acear_1267" /note="COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR011055:IPR016047; KEGG: hor:Hore_23480 peptidase M23B; PFAM: peptidase M23; SPTR: B8D1E1 peptidase M23B; PFAM: peptidase family M23" /codon_start=1 /transl_table=11 /product="peptidase M23" /protein_id="YP_003827847.1" /db_xref="GI:302392027" /db_xref="GeneID:9513310" /translation="MSYEEQKKVVTIQIIPHSTGKLVSFKISKKLLKIIISFIILSIV GSSLGLTIYYSRNLKLQQTIDKLHHVKKENIELRNKLNDLSAETQELQAKFNELEAID SEIKNIIGYEKANSQADNSETLIHITNQEINFGEDTTEASLASGYTSNLVNNTEDRLQ KLKNVFPKKKKELKQLKISVVEYKDYLASKPVGWPVKTEKKRITSDFGYRLHPILNRR IMHEGVDIGVWYGTEIYATGAGKVIHAGWKNGYGKLVMIDHGYGFRTLYGHNRRVNVR VGDEIERGDLIAYSGNTGRSSGPHLHYEIQVNGKPVNPMDYIKE" misc_feature complement(1350035..>1350832) /locus_tag="Acear_1267" /note="Membrane-bound metallopeptidase [Cell division and chromosome partitioning]; Region: COG4942" /db_xref="CDD:34550" misc_feature complement(1350053..1350337) /locus_tag="Acear_1267" /note="Peptidase family M23; Region: Peptidase_M23; pfam01551" /db_xref="CDD:190031" gene 1351307..1352263 /locus_tag="Acear_1268" /db_xref="GeneID:9513311" CDS 1351307..1352263 /locus_tag="Acear_1268" /note="COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR011330:IPR018392:IPR002509:IPR002482; KEGG: amt:Amet_4252 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; SPTR: A6TVW2 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; LysM domain; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB" /codon_start=1 /transl_table=11 /product="polysaccharide deacetylase" /protein_id="YP_003827848.1" /db_xref="GI:302392028" /db_xref="GeneID:9513311" /translation="MSSTKKNLITLLLIFIIISTVCITSYAASNYTIQSGDSLFSISR KYNTNVSTLAKANKIKNPNLIYSGSTLQVPDAVETKSTKDDSNTYTSDNWLSGNGMIS ISDSKDRSKKIYRRTKADSMQIALTFDDGPDKIYTPQILKILKKYDIKATFFLLGKEV QKYPQITKQIIEEGHLIGNHSWSHPDLTKLDKEELKKEVLTTEEKIKEVTGRAPALIR PPYGAVSDEIVDQLKEMNYKIIHWSVDSLDWNSDTKEEILDRVLPRLKPGVIILFHSS IGKSRNLTPTVQALPAIIEELQKRNIELVTVDKLLSLASYKS" misc_feature 1351397..1351528 /locus_tag="Acear_1268" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature order(1351397..1351399,1351406..1351408,1351415..1351417, 1351430..1351432,1351439..1351441) /locus_tag="Acear_1268" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature 1351661..1352239 /locus_tag="Acear_1268" /note="Polysaccharide deacetylase; Region: Polysacc_deac_1; cl12061" /db_xref="CDD:189245" gene complement(1352297..1353322) /locus_tag="Acear_1269" /db_xref="GeneID:9513312" CDS complement(1352297..1353322) /locus_tag="Acear_1269" /EC_number="3.5.1.28" /note="COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR012854:IPR002508:IPR010916; KEGG: cth:Cthe_1016 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; PRIAM: N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SPTR: A3DE69 Cell wall hydrolase/autolysin; PFAM: Copper amine oxidase N-terminal domain; N-acetylmuramoyl-L-alanine amidase" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="YP_003827849.1" /db_xref="GI:302392029" /db_xref="GeneID:9513312" /translation="MTIKYKVLVILLAIIILFSFSVEAKEAKLIIDGQRIKTNLIIIN GRTLVPAEVISKHFGAKLNWDSRRQELRIDSKNLTAKLTVGSNQAVVNSITVPLQTKV RVSNGKVLVPLRFLPKIYGGNLAWKGSTKTIYYHSNRITNISGVMASSLTSNSENYHW KKSKRIVIDPGHGGESPGAIGHSGVEEKRVNYQIASRVYQQLKEEGFQVILTREQGQD LPLLQRSAISNDWPADMFISIHADYNYRSWITGTTTYAHWNASKNNWALAWYVQDEIV KRTGTDSNGLKAANFAVLRGNNVPAILVETAFLSNPKEEYLLTTPAFQQKIVEGVVAG IKRYYYN" misc_feature complement(1352921..1353196) /locus_tag="Acear_1269" /note="Copper amine oxidase N-terminal domain; Region: Cu_amine_oxidN1; pfam07833" /db_xref="CDD:191865" misc_feature complement(1352315..1352830) /locus_tag="Acear_1269" /note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino...; Region: MurNAc-LAA; cd02696" /db_xref="CDD:119407" misc_feature complement(order(1352408..1352410,1352603..1352605, 1352762..1352764,1352807..1352809)) /locus_tag="Acear_1269" /note="active site" /db_xref="CDD:119407" misc_feature complement(order(1352603..1352605,1352762..1352764, 1352807..1352809)) /locus_tag="Acear_1269" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:119407" gene 1353446..1353665 /locus_tag="Acear_1270" /pseudo /db_xref="GeneID:9513313" gene complement(1353737..1354534) /locus_tag="Acear_1271" /db_xref="GeneID:9513314" CDS complement(1353737..1354534) /locus_tag="Acear_1271" /EC_number="2.1.1.13" /note="COGs: COG1410 methionine synthase I cobalamin-binding domain; InterPro IPR011005:IPR000489; KEGG: mta:Moth_2115 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; PFAM: dihydropteroate synthase DHPS; PRIAM: methionine synthase; SPTR: Q2RGN2 5-methyltetrahydrofolate--homocysteine S-methyltransferase; PFAM: Pterin binding enzyme" /codon_start=1 /transl_table=11 /product="methionine synthase" /protein_id="YP_003827850.1" /db_xref="GI:302392030" /db_xref="GeneID:9513314" /translation="MIIVGELINTSREGIEPAVKDRDTEFIQDLAKKQEEAGADYIDV NCGTLIDEEQEALEWLVNTVQEVVDVPLCIDTPDPKAMDRALAAHDGKALVNSITAEE ERFNETLEIIQKHDAQVVALVMDDGGMPDGIEDRTRVGKKLIEDLTDAGMDMDDIYVD PIIQPIGTDQEVGQHILEAIDEITSEYEDVHITCGLSNISHGLPQRKLLNRTFVTLAM AKGMDSAIIDPLDPKIMALITTANTLLGNDKHCSNYIQAVQNGELDV" misc_feature complement(1353851..1354534) /locus_tag="Acear_1271" /note="Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a...; Region: Pterin_binding; cl00219" /db_xref="CDD:197403" misc_feature complement(order(1353851..1353853,1353857..1353859, 1353938..1353940,1353950..1353952,1354055..1354057, 1354169..1354171,1354241..1354243,1354247..1354249, 1354310..1354312,1354508..1354510)) /locus_tag="Acear_1271" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29544" misc_feature complement(order(1353875..1353877,1353887..1353889, 1353899..1353901,1354007..1354012)) /locus_tag="Acear_1271" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29544" misc_feature complement(1353938..1353946) /locus_tag="Acear_1271" /note="inhibitor binding site; inhibition site" /db_xref="CDD:29544" gene complement(1354635..1355279) /locus_tag="Acear_1272" /db_xref="GeneID:9513315" CDS complement(1354635..1355279) /locus_tag="Acear_1272" /note="COGs: COG5012 cobalamin binding protein; InterPro IPR006158:IPR003759:IPR012741:IPR008254; KEGG: dhd:Dhaf_4325 methyltransferase cognate corrinoid protein; PFAM: cobalamin B12-binding domain protein; methionine synthase B12-binding module cap domain protein; SPTR: Q24SP8 Putative uncharacterized protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, methanosarcina family; methylmalonyl-CoA mutase C-terminal domain" /codon_start=1 /transl_table=11 /product="trimethylamine corrinoid protein" /protein_id="YP_003827851.1" /db_xref="GI:302392031" /db_xref="GeneID:9513315" /translation="MSDELFEKAAEAICDADVDKAEEIAQTALDEGIDPLKMIEKGYT AGIKEVGRLFDRGELFLPQLMGCAEAMKKASGILQEAAAKEDAAAGESIKIVLGTVQG DVHDIGKGIVASILEANGIEVFDLGTDVPIEDFITKAKEVDADIIGTSALLTTTMGAN EELLEILEEENLRDEFDLVVGGGPVTKRFAEKIGADGYAEDANEAVNKIKELAD" misc_feature complement(1354665..1355258) /locus_tag="Acear_1272" /note="methyltransferase cognate corrinoid proteins, Methanosarcina family; Region: pyl_corrinoid; TIGR02370" /db_xref="CDD:131423" misc_feature complement(1354647..1355252) /locus_tag="Acear_1272" /note="B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or...; Region: corrinoid_protein_B12-BD; cd02070" /db_xref="CDD:30208" misc_feature complement(order(1354665..1354667,1354674..1354676, 1354683..1354685,1354731..1354733,1354818..1354826, 1354830..1354838,1354947..1354949,1354956..1354976)) /locus_tag="Acear_1272" /note="B12 binding site [chemical binding]; other site" /db_xref="CDD:30208" misc_feature complement(1354965..1354967) /locus_tag="Acear_1272" /note="cobalt ligand [ion binding]; other site" /db_xref="CDD:30208" gene complement(1355301..1356686) /locus_tag="Acear_1273" /db_xref="GeneID:9513316" CDS complement(1355301..1356686) /locus_tag="Acear_1273" /note="Contains pyrrolysine; InterPro IPR012653; KEGG: mac:MA0933 dimethylamine methyltransferase; PFAM: Dimethylamine:corrinoid methyltransferase; SPTR: Q8TS72 Dimethylamine methyltransferase mtbB2; TIGRFAM: dimethylamine; PFAM: Dimethylamine methyltransferase (Dimeth_PyL); TIGRFAM: dimethylamine:corrinoid methyltransferase" /codon_start=1 /transl_except=(pos:complement(1355637..1355639),aa:Pyl) /transl_table=11 /product="dimethylamine:corrinoid methyltransferase" /protein_id="YP_003827852.1" /db_xref="GI:302392032" /db_xref="GeneID:9513316" /translation="MKNMVQTRLGDGSTIEMTEDEIRADIERGIEDAVDRAEVDSLPE EEIEKLTDIYTRPSKFVSVETGNELVLTFDEGSVKLKRLAVSIGRIPDLQIYERVFCS DTAELAHIDYSFKPVKPIVAEEQIEMEQALLSTVLPLYYGAMPNLSLYSQPDGAFPNP AELLPKGKVKEAQEAYEGMMEHAIKDMVFVGSKMYEAGADGINFDTTGSAGEPDFLAT LKATEELKEKYPNISIEMGMAGEFVLGMHGDLEYNGVGLAGLYPHEQVKLAEEAGVDV FGPVVNINSSETIPWNIGRTVTMMKACAEAADIPVHANVGMGVGGVPIVETPPADSLS RASAALAEIGKQDGLOVGVGDPNGMVISHALASGMGGVRTAGDLVARMQMSENMRLDE AKEYVADKLGVEVGELTDPVIMDEVRNELNIGRVQPEAGEAKGVEAKFNISELLDIRI NSVEKFKNKTS" misc_feature complement(1355307..1356665) /locus_tag="Acear_1273" /note="Dimethylamine methyltransferase (Dimeth_PyL); Region: Dimeth_Pyl; cl09737" /db_xref="CDD:142242" gene complement(1357168..1357998) /locus_tag="Acear_1274" /db_xref="GeneID:9513317" CDS complement(1357168..1357998) /locus_tag="Acear_1274" /note="COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR016071:IPR006021:IPR004365; KEGG: hor:Hore_04500 nuclease (SNase domain protein); PFAM: nuclease (SNase domain protein); nucleic acid binding OB-fold tRNA/helicase-type; SMART: nuclease (SNase domain protein); SPTR: B8D1Y1 Nuclease (SNase domain protein); PFAM: Staphylococcal nuclease homologue; OB-fold nucleic acid binding domain" /codon_start=1 /transl_table=11 /product="nuclease (SNase domain protein)" /protein_id="YP_003827853.1" /db_xref="GI:302392033" /db_xref="GeneID:9513317" /translation="MLLIKRRVLSLLLLVMILLSFGIAGSALKVNEELKINQDKLDNL AKVYVAKVIDGDTIKTTGGEKIRFIGVDTPETKHPEKSVEYYGKEASKFTKNKLEDKK VYLEYGVEKKDKYKRTLAYIFMEDGTFFNAKLLVAGYAELLTIPPNLKYVELFKDLVR EARGNNRGLWKKEEEEASQLPVISWQKADEYIGTKVIVEGEVIDTYDSGKAVFLNFAE EYWNTFSAVIFASNLYKFSNNPAQHYLHKEVRIRGRVKDYEESPEIIIEEPKQIRIKE " misc_feature complement(1357483..1357872) /locus_tag="Acear_1274" /note="Staphylococcal nuclease homologues; Region: SNc; smart00318" /db_xref="CDD:128613" misc_feature complement(1357483..1357848) /locus_tag="Acear_1274" /note="Staphylococcal nuclease homologues. SNase homologues are found in bacteria, archaea, and eukaryotes. They contain no disufide bonds; Region: SNc; cd00175" /db_xref="CDD:29137" misc_feature complement(order(1357648..1357650,1357654..1357659, 1357774..1357776,1357783..1357785,1357801..1357803, 1357831..1357833)) /locus_tag="Acear_1274" /note="Catalytic site; other site" /db_xref="CDD:29137" gene complement(1358621..1359250) /locus_tag="Acear_1275" /db_xref="GeneID:9513318" CDS complement(1358621..1359250) /locus_tag="Acear_1275" /note="COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR008978:IPR002068; KEGG: dae:Dtox_3173 heat shock protein HSP20; SPTR: C1TAJ0 Molecular chaperone (Small heat shock protein); PFAM: Hsp20/alpha crystallin family" /codon_start=1 /transl_table=11 /product="Molecular chaperone (small heat shock protein)" /protein_id="YP_003827854.1" /db_xref="GI:302392034" /db_xref="GeneID:9513318" /translation="MLTNQFTQSPFLAQNAFGMPQQQAFAGQNLQSGQNLQSMGAVSG YAPRTNAWSYRLQPASNAGNFNNMTTGTIQQQPGAIQQQGSQFGQNAQAGYAATSNAM MSQQLSTGIISPSVDISETKNDIIVACNLPNVNVNNLNLTATENSLSISAQAFAGNQS SGIHRTVPLSTTVRAEAIDANYSNGILEVRMPKKEGTSNRQQLQVNVGE" misc_feature complement(1358672..1358902) /locus_tag="Acear_1275" /note="Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are...; Region: ACD_sHsps-like; cd06464" /db_xref="CDD:107221" misc_feature complement(order(1358693..1358698,1358756..1358758, 1358852..1358857,1358861..1358863,1358867..1358869, 1358888..1358902)) /locus_tag="Acear_1275" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:107221" gene complement(1359330..1359701) /locus_tag="Acear_1276" /db_xref="GeneID:9513319" CDS complement(1359330..1359701) /locus_tag="Acear_1276" /note="COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR008978:IPR002068; KEGG: rpk:RPR_p13 small heat shock protein; PFAM: heat shock protein Hsp20; SPTR: A6MYV2 Small heat shock protein; PFAM: Hsp20/alpha crystallin family" /codon_start=1 /transl_table=11 /product="heat shock protein Hsp20" /protein_id="YP_003827855.1" /db_xref="GI:302392035" /db_xref="GeneID:9513319" /translation="MANNFNLQNRQGNHSTGIANYNQPNYVSPQVDVVEDDRAVHYIY ELPGVNLESLNVELSQESIFIEANIDSAVQNQMNFLHQERRKGAFFRKMSLPTNVDNN NAEANFTHGLLKVTFPKTNNF" misc_feature complement(1359345..1359608) /locus_tag="Acear_1276" /note="Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are...; Region: ACD_sHsps-like; cd06464" /db_xref="CDD:107221" misc_feature complement(order(1359366..1359371,1359429..1359431, 1359558..1359563,1359567..1359569,1359573..1359575, 1359594..1359608)) /locus_tag="Acear_1276" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:107221" gene 1359803..1360783 /locus_tag="Acear_1277" /db_xref="GeneID:9513320" CDS 1359803..1360783 /locus_tag="Acear_1277" /note="InterPro IPR002825:IPR019793; KEGG: dae:Dtox_3172 protein of unknown function DUF114; PFAM: protein of unknown function DUF114; SPTR: C1TAI9 ClpP class periplasmic serine protease; PFAM: serine dehydrogenase proteinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827856.1" /db_xref="GI:302392036" /db_xref="GeneID:9513320" /translation="MSREDRLQIIEEISNRRNSEVICYFTGDRKNISTRIAPDAVKVI YQHLRQINPDNKIDLFIYTRGGDVLTPWRLVNLIREYCDYFSVLVPFRAYSAGTLICL GANEIVMGKMGELGPIDPTVANAFNPQNPNNPEAKIPISVEDVSAYLDLAQERFKVQS EDNLINALSYLVDQVHPLALGNVRRNYLLIRSTAKKLLSLHSLVENEAVVQNIIDYLT EKLYAHNYMIPRKEAADIKLPVKYPDPELEDLLWRLYENYEEELELKKPFQPLDYLDH ANNEFQVCGGYIESKPALDKFIFTGQVQQDEMMNEPEVNITEQKWVPAIK" misc_feature 1359818..>1360306 /locus_tag="Acear_1277" /note="Serine dehydrogenase proteinase; Region: SDH_sah; pfam01972" /db_xref="CDD:110924" misc_feature 1359944..>1360147 /locus_tag="Acear_1277" /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase...; Region: crotonase-like; cl14780" /db_xref="CDD:189268" misc_feature 1360085..1360087 /locus_tag="Acear_1277" /note="active site" /db_xref="CDD:132923" gene 1360814..1360990 /locus_tag="Acear_1278" /db_xref="GeneID:9513321" CDS 1360814..1360990 /locus_tag="Acear_1278" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827857.1" /db_xref="GI:302392037" /db_xref="GeneID:9513321" /translation="MVDINPNHDIATPEETETYYIIDDNSGSASANYLSRNLIKKDGI IIASEENNTSADLN" gene complement(1361055..1361933) /locus_tag="Acear_1279" /db_xref="GeneID:9513322" CDS complement(1361055..1361933) /locus_tag="Acear_1279" /note="InterPro IPR016181:IPR000182; KEGG: mbu:Mbur_0273 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Q12Z48 Acetyltransferase (GNAT) family protein; PFAM: Acetyltransferase (GNAT) family" /codon_start=1 /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_003827858.1" /db_xref="GI:302392038" /db_xref="GeneID:9513322" /translation="MSISSLKLENEHGNFKIIRGRNYAAKVKYSDFNQRITVKSYWGK NVFSLGKRLKSEAKRKNYGKIWVKAKTSDKNKFIRLGFKSEAEIPNFYRTEDAIIMSY YVNEKRSLHFNKEKAEEIIEKITNLEPKNKRPELNDGWNFKLAESSDLDEMAQLYKQV FDSYPNPIFDPEYLYKTMQENLVYGLIYDNNNNLVATASADTDPELKNAEMTDFATAP EARGQGAASYLLMELEEELAERNYQSLYTIARSISYSMNKVFKQAGYEYTGKMIKNCH IGGKLEDMNLWCKVID" misc_feature complement(1361067..1361846) /locus_tag="Acear_1279" /note="putative beta-lysine N-acetyltransferase; Region: GNAT_ablB; TIGR03827" /db_xref="CDD:163539" misc_feature complement(1361136..1361372) /locus_tag="Acear_1279" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cl00357" /db_xref="CDD:197408" gene complement(1361960..1363165) /locus_tag="Acear_1280" /db_xref="GeneID:9513323" CDS complement(1361960..1363165) /locus_tag="Acear_1280" /EC_number="5.4.3.2" /note="COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR003739:IPR007197; KEGG: dae:Dtox_0600 lysine 2,3-aminomutase YodO family protein; PFAM: radical SAM domain protein; PRIAM: Lysine 2,3-aminomutase; SPTR: A8MLR3 Lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Lysine-2,3-aminomutase; radical SAM superfamily; TIGRFAM: KamA family protein" /codon_start=1 /transl_table=11 /product="L-lysine 2,3-aminomutase" /protein_id="YP_003827859.1" /db_xref="GI:302392039" /db_xref="GeneID:9513323" /translation="MDLAEKLEVWDCSKEEWEDWRWQLKNSITTADELQQYFDIDDQQ AEEIKEAAKIFPMSITPYYASLIDFDDELCPIKLQAVPQKEELEEYEYEMEDPLHEEE DSPVPGLTHRYPDRVLLMVTNYCSMFCRHCTRKRKVGDGNTQDDFDQIQAGIEYIKNN PQVRDVLLSGGDPLLLDLDKLEKIIARLKEIPHVEIVRLGSRVPVVLPQRIDDELIAR LKKYSPLWINTHFNHKKEITSRSKKALAKLADNGFPLGNQTVLLRNINDSPAVMEDLM HKLVANRVRPYYLYQCDLSRGIEHFRTSISTGIEIIESLIGHTSGFAVPRYVVDAPGG GGKIPISPNYVISSSSQKTILRNYEGDIVAYREPECREVESNRTAEKEKTEAVGVKKL LVDDDQFSL" misc_feature complement(1362167..1363153) /locus_tag="Acear_1280" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" misc_feature complement(1361963..1363135) /locus_tag="Acear_1280" /note="lysine-2,3-aminomutase; Region: lys_2_3_AblA; TIGR03820" /db_xref="CDD:163532" misc_feature complement(<1361963..1362214) /locus_tag="Acear_1280" /note="Lysine-2,3-aminomutase; Region: LAM_C; pfam12544" /db_xref="CDD:152978" gene 1364248..1364335 /locus_tag="Acear_1281" /pseudo /db_xref="GeneID:9513324" gene 1364362..1365513 /locus_tag="Acear_1282" /db_xref="GeneID:9513325" CDS 1364362..1365513 /locus_tag="Acear_1282" /note="COGs: COG0004 Ammonia permease; InterPro IPR001905:IPR002229; KEGG: Ammonium transporter Family protein ; K06580 Rhesus blood group-associated glycoprotein; PFAM: ammonium transporter; SPTR: C5RME7 Rh family protein/ammonium transporter; PFAM: Ammonium transporter Family" /codon_start=1 /transl_table=11 /product="ammonium transporter" /protein_id="YP_003827860.1" /db_xref="GI:302392040" /db_xref="GeneID:9513325" /translation="MKSKIKNKLVSKSIIFCLLFLFVASTTTYAVEESTAELFQYHRG QDVFFMFMLVAFLMLFIKKFEWGVCLVTLLTLSVAFPLYVIIQRNLFDFSLGIELIIT GIFCAITLIIAAGVIFGHVKIWHFIPLGILFVPGYILNEWFLFSYLEGVADSGGSILV HMFAAYWGWGVILALQRRDVNQAEMNATTHSISFVWLASMLLWVLWPSFTTSLLPTDL IITGMTTTYLALMASTLTAFLVLKWIKGELDPLIYTYAILAGGVAIGSTVDLVGPGTA WLIGAAGGIISVLCFLYLDDWLANKTNLTDTMGVNNLHGIPGIFGGLMGIPFAGSVQI YAIAGGIIIPLVTGLIAGIIVKIFEKPQLLLDDAEIFDINIDLERTQQM" misc_feature <1364674..1365435 /locus_tag="Acear_1282" /note="Ammonium Transporter Family; Region: Ammonium_transp; cl03012" /db_xref="CDD:194508" gene 1365700..1365912 /locus_tag="Acear_1283" /db_xref="GeneID:9513326" CDS 1365700..1365912 /locus_tag="Acear_1283" /note="InterPro IPR011437; KEGG: bay:RBAM_027740 hypothetical protein; PFAM: protein of unknown function DUF1540; SPTR: A7Z806 Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1540)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827861.1" /db_xref="GI:302392041" /db_xref="GeneID:9513326" /translation="MSEEMGEIACNVSNCEYWGNGNICTADKISVSTDSYTGETADME IGAIDDEVASPKSQQTQCVTFKPTDE" gene complement(1365958..1367133) /locus_tag="Acear_1284" /db_xref="GeneID:9513327" CDS complement(1365958..1367133) /locus_tag="Acear_1284" /note="COGs: COG0301 Thiamine biosynthesis ATP pyrophosphatase; InterPro IPR003720:IPR004114:IPR020536; KEGG: tpd:Teth39_0798 thiamine biosynthesis protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain protein; SPTR: C7IQV2 Thiamine biosynthesis/tRNA modification protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI" /codon_start=1 /transl_table=11 /product="thiamine biosynthesis/tRNA modification protein ThiI" /protein_id="YP_003827862.1" /db_xref="GI:302392042" /db_xref="GeneID:9513327" /translation="MKDLILIKYGEIGIKGSNRYLFEDRLIRNMEESLSGINKEVDIY KTHGRVFVEAEGSFERIRERLQKVFGIVGVCSAKETELDFEKIKNAGLELIERELSGK PRTFKVETRRINKDFQYDSMEISRKLGAYILRNTEDLTVDVHDPDIQLDVEIRHKQAY LYASDLPGVKGLPVGSCGKAGLLLSGGIDSPVAGWMAMKRGVEIMPIYFHTPPFTSSR AKEKVLDLSRVLAEYAGGSLQVRIVPFTEVQKALNEKCPEKLLTVIMRRMMMRIAERI TNNNEGKALITGESIGQVASQTLESMNVTNAVAQMPVFRPLIGLDKNEIKARAKEIGT YEISIQPYDDCCTIFVPDSPETKPKLRFVEYGEEDLEVERLIEEAVKEAEIITVEAD" misc_feature complement(1365967..1367133) /locus_tag="Acear_1284" /note="thiamine biosynthesis protein ThiI; Provisional; Region: PRK01565" /db_xref="CDD:179303" misc_feature complement(1366648..1366935) /locus_tag="Acear_1284" /note="THUMP domain; Region: THUMP; cl12076" /db_xref="CDD:159736" misc_feature complement(1366066..1366599) /locus_tag="Acear_1284" /note="ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway. It belongs to the Adenosine Nucleotide Hydrolysis suoerfamily and predicted to bind to Adenosine nucleotide; Region: ThiI; cd01712" /db_xref="CDD:30167" misc_feature complement(order(1366501..1366503,1366507..1366509, 1366564..1366575,1366579..1366587)) /locus_tag="Acear_1284" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30167" gene complement(1367151..1368311) /locus_tag="Acear_1285" /db_xref="GeneID:9513328" CDS complement(1367151..1368311) /locus_tag="Acear_1285" /EC_number="2.8.1.7" /note="COGs: COG1104 cysteine sulfinate desulfinase/cysteine desulfurase; InterProIPR015424:IPR000192:IPR015421:IPR020578:IPR 016454; KEGG: tpd:Teth39_0797 aminotransferase, class V; PFAM: aminotransferase class V; PRIAM: cysteine desulfurase; SPTR: B0K8J1 Aminotransferase, class V; PFAM: Aminotransferase class-V" /codon_start=1 /transl_table=11 /product="cysteine desulfurase" /protein_id="YP_003827863.1" /db_xref="GI:302392043" /db_xref="GeneID:9513328" /translation="MDEVYLDNSATTKPKFEVIEAMMEPLTDVYGNPSSLHSMGVEAE KLIKQARRSLAKVIKADEREIIFTSGGTEANNLAIKGTLNALQRYGNQIITTKVEHSS VLDTLKELEEKGWEVVYLDVDKRGRVDLKQLEEAVSENTVLVSIMQVNSEVGTVQPIA EVEKIINEYRDSRLYLHVDGVQALGKLELDVNRPNIDLLSLSSHKIHGPKGVGALYID KDIRLKPQLTGGGQEMEYRGGTENVPGIVGFGRAADLIRDGFKEDTFYMKQLKERLAE GIIDNFKGVQINGPEPKDGVSHILNLSFRGLKGEVLIHALEEKNIYASTGSACSSKTP DPSHVLQAMDLDDEAMEGAIRFSLSSENTKKEIDYVIDVLTEVVPELRKIIG" misc_feature complement(1367178..1368302) /locus_tag="Acear_1285" /note="Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]; Region: csdA; COG0520" /db_xref="CDD:30866" misc_feature complement(1367190..1368302) /locus_tag="Acear_1285" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl00321" /db_xref="CDD:193768" misc_feature complement(order(1367697..1367699,1367706..1367708, 1367766..1367768,1367775..1367777,1367868..1367870, 1368087..1368089,1368096..1368101)) /locus_tag="Acear_1285" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99742" misc_feature complement(1367697..1367699) /locus_tag="Acear_1285" /note="catalytic residue [active]" /db_xref="CDD:99742" gene complement(1368338..1368646) /locus_tag="Acear_1286" /db_xref="GeneID:9513329" CDS complement(1368338..1368646) /locus_tag="Acear_1286" /note="COGs: COG0011 conserved hypothetical protein; InterPro IPR016198:IPR002767; KEGG: hor:Hore_03360 conserved hypothetical protein TIGR00106; PFAM: protein of unknown function DUF77; SPTR: B8D1M0 Putative uncharacterized protein; PFAM: Domain of unknown function DUF77; TIGRFAM: conserved hypothetical protein TIGR00106" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827864.1" /db_xref="GI:302392044" /db_xref="GeneID:9513329" /translation="MAIVEVTVVPLGTEDASLSKYVAGCQQVLVEEEGIEYQLTPMGT IIEGDLDTIFAVVKKLHETPFDEGAVRVSTSIKIDDRRDKEASMDQKIDSVESKLEQG " misc_feature complement(1368359..1368637) /locus_tag="Acear_1286" /note="Domain of unknown function DUF77; Region: DUF77; cl00307" /db_xref="CDD:193760" gene complement(1368660..1370297) /locus_tag="Acear_1287" /db_xref="GeneID:9513330" CDS complement(1368660..1370297) /locus_tag="Acear_1287" /note="COGs: COG1031 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: nth:Nther_1966 radical SAM domain protein; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B2A6K3 radical SAM domain protein; PFAM: radical SAM superfamily" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003827865.1" /db_xref="GI:302392045" /db_xref="GeneID:9513330" /translation="MSRQKVSILDGYLDEPSCLGVPPYIAPHVRYTYGALRDAGLAKE EIDYLTIDQFRDNKEELLNRLKMSQAVVIIAGTTVPGKYLGGKPISLQEIESLTERLQ SPEVILSGPIINSGLKINSVDKTASEIPGLTVYQEFTNNNLITELDPVEIVDRWARLG AVVTTKHPNFPYLVCELETFRGCPREENCAFCSEGFKEITYHRSLEGIIGEVAELSSL GNQYFRLGCQTDLLLYQAEEQEGRLCPNPEVIKSLYTGIREVASDLKTLHMDNINPAT IADFPDRSAEVLEMIAAYNTAGDIAAFGLESADPQVLEANNIGTTPDKTMQAIEIMNQ ASGYRDEDGVPKLLPGLNLLHGLKGEREQTMELNLKFLHKIIEKDLLVRRINVRQVNA LQGYETGYNYSKQEFKEYKDKINEEINQPMLKRVFPKGTLLKEVIVEKSQGKISFGRQ LGTYPILIGVPGQRQVGKVFDVKVIDYGYRSVTGIPWPFNLNQAGLAELEALPGIGKK RAMRIFMADKIKDLDELNRVLDYSYDVEQLRNLVIFN" misc_feature complement(1368711..1370285) /locus_tag="Acear_1287" /note="Uncharacterized Fe-S oxidoreductase [Energy production and conversion]; Region: COG1031" /db_xref="CDD:31234" misc_feature complement(1369293..1369769) /locus_tag="Acear_1287" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene complement(1370413..1371912) /locus_tag="Acear_1288" /db_xref="GeneID:9513331" CDS complement(1370413..1371912) /locus_tag="Acear_1288" /note="COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: cpo:COPRO5265_1307 sodium- and chloride-dependent transporter, TnaT; PFAM: sodium:neurotransmitter symporter; SPTR: C4IJM2 transporter; PFAM: Sodium:neurotransmitter symporter family" /codon_start=1 /transl_table=11 /product="sodium:neurotransmitter symporter" /protein_id="YP_003827866.1" /db_xref="GI:302392046" /db_xref="GeneID:9513331" /translation="MESSENQWGSRLGFILATIGSAVGLGNIWRFSYVAYDNGGGAFL IPYFFALLTTGIPLLILEFSFGQKMRGSAPFSFTKVDEKWEWLGWWSTLVTFVLISYY SVIISWSFKYIYYAFSGAWGSNPEAFLYNTHLQLTSGIGELGGVNLSVLLIVLVVWLI NFVIVYNGIEAGVEKASKIFMPILALLMLIIVVRGITLPGAVEGINKFLEPDFAALLN PGVWLAAYGQIFFTLSVCFGVMIAYGSYLSEDSDIVNNAFITALANCSFSFIVGIGVF GILGYMAAQTGQPIEEVVAQSIGLAFVAFPKAINMLPAFNTVLGVIFFVALGIAGISS SISMVEAVSAPVMDKFNLSRKKATTIVCGLGFIASILFTTGAGLYFLDIIDHYNMQFG VAVIGILEAVVIGWYYKAEVLRDFFNPISNFQVGRWWDIMIKYITPLFLTYMLIRSFV MELNQPYAGYPVSDLKIGWIAAAGVLIMSIILNLLPNRYDGLVKNETDL" misc_feature complement(1370566..1371912) /locus_tag="Acear_1288" /note="Sodium:neurotransmitter symporter family; Region: SNF; cl11976" /db_xref="CDD:196291" gene 1372063..1372821 /locus_tag="Acear_1289" /db_xref="GeneID:9513332" CDS 1372063..1372821 /locus_tag="Acear_1289" /note="COGs: COG3872 metal-dependent protein; InterPro IPR010787; KEGG: tle:Tlet_1004 hypothetical protein; PFAM: protein of unknown function DUF1385; SPTR: A8F5Y6 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1385)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827867.1" /db_xref="GI:302392047" /db_xref="GeneID:9513332" /translation="MKMGGRSYRNGIRLFGQKYSVKTYYEDGQLKYEVGQNALANNKL FLSAKKIPVLRGMVSILFSIFYFLKEAIQKPTKFWPILLFIIFDISLEIYFQLFPNSI ASVSFLPTPAKIPVYLVVVISIILLLRMTILQELFKFHGAEHKAINYYQSDYQQNIAS HSRLARRCGTNLVVFYLFIIFIFETLGLGFNIYLETLVAIGIAYEFILILPESILNIP YLVQMITTIEPDSKHLKAAEKALDILISMEERDK" misc_feature 1372213..1372809 /locus_tag="Acear_1289" /note="Protein of unknown function (DUF1385); Region: DUF1385; cl01595" /db_xref="CDD:154493" gene complement(1372839..1373852) /locus_tag="Acear_1290" /db_xref="GeneID:9513333" CDS complement(1372839..1373852) /locus_tag="Acear_1290" /note="COGs: COG1533 DNA repair photolyase; InterPro IPR007197; KEGG: hmo:HM1_2342 spore photoproduct lyase; PFAM: radical SAM domain protein; SPTR: B0THU2 spore photoproduct lyase; TIGRFAM: spore photoproduct lyase" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003827868.1" /db_xref="GI:302392048" /db_xref="GeneID:9513333" /translation="MKAFEPKSVLIEEQALDYELGAEIKERYEDKEVPVRMIESHNRV KWKEQMTPLELFEKAKETLVVGVKKTLRFKSCQPSADYRVVGNTSCPGRCEYCYLATN LGSAVYPRVYVNIDEILDAIKKHIKKSEKEITTFEASSSSDPIALEHITGVLGRMINF FSQRDDALLRVATKFDNIDSFLNIDHNEKTRFRYSINSAYVIREFENLTPSLTSRLQA AYKLKEAGYPVGFIIAPIMLHENWKQEYKRMIDKLATAFSDFQNSELSFELIMFRFST RTKNIIQERYPETKLDFSKDQKKHKGFGKYVYDEETAEQLRTYLAELIKDRLPKAEIE YFV" misc_feature complement(1372842..1373843) /locus_tag="Acear_1290" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" misc_feature complement(1372842..1373648) /locus_tag="Acear_1290" /note="DNA repair photolyase [DNA replication, recombination, and repair]; Region: SplB; COG1533" /db_xref="CDD:31722" gene complement(1373849..1374322) /locus_tag="Acear_1291" /db_xref="GeneID:9513334" CDS complement(1373849..1374322) /locus_tag="Acear_1291" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827869.1" /db_xref="GI:302392049" /db_xref="GeneID:9513334" /translation="MLIDRLIKEVKFELQEAYRLLDELNEEELQSEINNDGLLAETTR NIITDQKRLLTNLEIDRLATVISKIEDEHTICPSCKKELSKNKRVVRLPYYSLINIKE NPIPPVEIIVIDTCQHCNYILDFEFFKGDEAYQLYQLLIKDLNNTEFELKEELER" gene complement(1374471..1375676) /locus_tag="Acear_1292" /db_xref="GeneID:9513335" CDS complement(1374471..1375676) /locus_tag="Acear_1292" /note="COGs: COG0281 Malic enzyme; InterPro IPR016040:IPR012301:IPR012302:IPR005829; KEGG: bbe:BBR47_13780 probable NAD-dependent malic enzyme; PFAM: malic protein domain protein; malic protein NAD-binding; SPTR: C0Z7W2 Probable NAD-dependent malic enzyme; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain" /codon_start=1 /transl_table=11 /product="malic protein domain protein" /protein_id="YP_003827870.1" /db_xref="GI:302392050" /db_xref="GeneID:9513335" /translation="MIIKEDALMGYETPEEKEKKEVQNKQVDTKKQQGRKQDRRAKSR TDFLQEIVNDPEKIYKYTDKGRRVAVISNGSSVLHLGEIGADAVLPIVESKVKLLEKY AEVEAVPICLDIMDIDKLAATIKNLAPAYGAIFLEDIAAPECIELQYRLQNQLSIPVY HDDQQGRAIAVLAALYNALQVVDKSLEDLNVVIFGSEIANLAIIELLLTAEVKEVTLY DKFGIFEPKDSKFSLIKKRIDRKSRVNIMETNLEEALDGADVLLGNGFGDILNQHVVH NMKEKPIIFSLADSIAKEAPRMDMFDFEEGEKINSQLVFPGLIKGLLQNRQKRLSLEV QLIAAKIVASLVEKPAADNILPNAFDPEVMNKVTEAVFKGVTTAKTDVDKLKKKEDLS LEVMEYLLD" misc_feature complement(1375221..>1375520) /locus_tag="Acear_1292" /note="Malic enzyme, N-terminal domain; Region: malic; pfam00390" /db_xref="CDD:144108" misc_feature complement(1374564..1375187) /locus_tag="Acear_1292" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(order(1374816..1374818,1374882..1374887, 1375017..1375022,1375080..1375088)) /locus_tag="Acear_1292" /note="NAD(P) binding pocket [chemical binding]; other site" /db_xref="CDD:133449" gene complement(1375713..1376699) /locus_tag="Acear_1293" /db_xref="GeneID:9513336" CDS complement(1375713..1376699) /locus_tag="Acear_1293" /EC_number="3.2.1.4" /note="COGs: COG1363 cellulase M and related protein; InterPro IPR008007; KEGG: tpd:Teth39_1873 peptidase M42 family protein; PFAM: peptidase M42 family protein; PRIAM: cellulase; SPTR: C0GHP8 peptidase M42 family protein; PFAM: M42 glutamyl aminopeptidase" /codon_start=1 /transl_table=11 /product="cellulase" /protein_id="YP_003827871.1" /db_xref="GI:302392051" /db_xref="GeneID:9513336" /translation="MKEIIKRLTEAYGPSGHEEEIRNLIRSELEDEVDEIRVDKLGNL ITYKEGSSDKKVMLAAHMDEIGLIVTHIDEDGFIRFSNVGGVSPYILLGERVIFGNGL EGVISKEELDSIKKLRFSKMYIDVGLDSKEDVKEEINIGDVATYKREFSDLGDRLLAK SLDNRAGCALLIETIKNLSTLANDTYFVFTVQEEVGIRGAQTSAFGINPDLGIAVDVT GTGDTPESRRMAVSLGEGPAIKVKDRSVITHPKVKDLMVSTAEEQEISYQLEVLEFGG TDAGSIHLTRKGVPTGVLSIPARYIHTPSEVVDYSDVENGVKLLDSILQKEV" misc_feature complement(1375719..1376699) /locus_tag="Acear_1293" /note="Cellulase M and related proteins [Carbohydrate transport and metabolism]; Region: FrvX; COG1363" /db_xref="CDD:31554" misc_feature complement(1375740..1376693) /locus_tag="Acear_1293" /note="M42 Peptidase, Endoglucanases; Region: M42_Frv; cd05656" /db_xref="CDD:193532" misc_feature complement(order(1375779..1375781,1375785..1375787, 1375791..1375793,1375800..1375805,1375848..1375853, 1375887..1375889,1375929..1375931,1375968..1375970, 1375977..1375979,1375995..1376003,1376082..1376087, 1376094..1376099,1376106..1376108,1376226..1376228, 1376232..1376234,1376241..1376243,1376247..1376249, 1376277..1376282,1376319..1376327,1376331..1376333, 1376385..1376387,1376391..1376396,1376415..1376426, 1376433..1376435,1376457..1376459,1376469..1376471, 1376490..1376498,1376574..1376576,1376583..1376588, 1376622..1376624,1376634..1376636,1376649..1376657)) /locus_tag="Acear_1293" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:193532" misc_feature complement(order(1375794..1375799,1375872..1375877, 1375884..1375886,1376043..1376054,1376109..1376111, 1376118..1376123,1376211..1376213,1376517..1376519)) /locus_tag="Acear_1293" /note="active site" /db_xref="CDD:193532" misc_feature complement(order(1375794..1375796,1376052..1376054, 1376118..1376123,1376211..1376213,1376517..1376519)) /locus_tag="Acear_1293" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193532" gene complement(1376683..1377720) /locus_tag="Acear_1294" /db_xref="GeneID:9513337" CDS complement(1376683..1377720) /locus_tag="Acear_1294" /note="COGs: COG1363 cellulase M and related protein; InterPro IPR008007; KEGG: amt:Amet_2621 cellulase; PFAM: peptidase M42 family protein; SPTR: C0GHP7 peptidase M42 family protein; PFAM: M42 glutamyl aminopeptidase" /codon_start=1 /transl_table=11 /product="peptidase M42 family protein" /protein_id="YP_003827872.1" /db_xref="GI:302392052" /db_xref="GeneID:9513337" /translation="MLLGKLSEAVGISGAEDEVRDLIKEEVADYVDEVKTDALGNLIT YKEGNPSLPTLLVAAHMDEIGLMITNIEKNGLLSFKPVGAVDKRILVSKQVVIGDDKV PGVIGAKAIHLQKPAERRKPLRIKQLYIDIGAKDEQAAKKLVQIGDTATFSTKFSQLN DKTVKGKAFDDRVGCSLLIKLLKQNYNFPVYGIFSVQEEVGLRGAGPAVYDLEPDLAL VLEGTTASDVPESKEHAYSTTVGEGPALTIMDATIIPNRSLLQEIITVAEKEEIDYQF RKSTAAGTDAGRVHLSKEGIPTAVISVPVRYIHSPASMLNLDDYQTTHDLVDKFSVKL AQGGISLERDN" misc_feature complement(1376713..1377720) /locus_tag="Acear_1294" /note="Cellulase M and related proteins [Carbohydrate transport and metabolism]; Region: FrvX; COG1363" /db_xref="CDD:31554" misc_feature complement(1376731..1377720) /locus_tag="Acear_1294" /note="M42 Peptidase, Endoglucanases; Region: M42_Frv; cd05656" /db_xref="CDD:193532" misc_feature complement(order(1376779..1376781,1376785..1376787, 1376791..1376793,1376800..1376805,1376848..1376853, 1376887..1376889,1376929..1376931,1376968..1376970, 1376977..1376979,1376995..1377003,1377088..1377093, 1377100..1377105,1377112..1377114,1377226..1377228, 1377232..1377234,1377244..1377246,1377250..1377252, 1377280..1377285,1377322..1377330,1377334..1377336, 1377406..1377408,1377412..1377417,1377439..1377450, 1377457..1377459,1377481..1377483,1377493..1377495, 1377514..1377522,1377601..1377603,1377610..1377615, 1377649..1377651,1377661..1377663,1377676..1377684)) /locus_tag="Acear_1294" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:193532" misc_feature complement(order(1376794..1376799,1376872..1376877, 1376884..1376886,1377049..1377060,1377115..1377117, 1377124..1377129,1377211..1377213,1377541..1377543)) /locus_tag="Acear_1294" /note="active site" /db_xref="CDD:193532" misc_feature complement(order(1376794..1376796,1377058..1377060, 1377124..1377129,1377211..1377213,1377541..1377543)) /locus_tag="Acear_1294" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193532" gene complement(1377711..1378769) /locus_tag="Acear_1295" /db_xref="GeneID:9513338" CDS complement(1377711..1378769) /locus_tag="Acear_1295" /note="COGs: COG1363 cellulase M and related protein; InterPro IPR008007; KEGG: tex:Teth514_0376 peptidase M42 family protein; PFAM: peptidase M42 family protein; SPTR: C0GHP6 cellulase; PFAM: M42 glutamyl aminopeptidase" /codon_start=1 /transl_table=11 /product="peptidase M42 family protein" /protein_id="YP_003827873.1" /db_xref="GI:302392053" /db_xref="GeneID:9513338" /translation="MENRDFLEKLSGYTGVSGREEKVAEIIRGSFSDYTDEIKTDTLG NLIALKEGEDKRKDKLQIMLAAHMDEIGLMVKDIDDDGFIKFTTVGGIDQRTLVGQEV TIYGKKAIKGIIGAKPPHVQEKEERNKAVKIEDMYIDVGRDNKEVTDLVSVGDLAVIE RRFSELDGNRVSGKALDDRSGVTVILECLKELQRLHHTADVYPTATVQEEVGVRGATT STYGIVPDIGIVIDVGHGKMPGTSEEDTAKLGDGPVIVLGPQIHPKLHKKLKEIANEY EIPYQINAETTPRGTDAFAVQVTRSGIPTALISIPLRYMHTSVETLDLTDIKQAGRLL ANFINQVDAEFVEGLRCF" misc_feature complement(1377729..1378769) /locus_tag="Acear_1295" /note="Cellulase M and related proteins [Carbohydrate transport and metabolism]; Region: FrvX; COG1363" /db_xref="CDD:31554" misc_feature complement(1377756..1378757) /locus_tag="Acear_1295" /note="M42 Peptidase, Endoglucanases; Region: M42_Frv; cd05656" /db_xref="CDD:193532" misc_feature complement(order(1377807..1377809,1377813..1377815, 1377819..1377821,1377828..1377833,1377876..1377881, 1377912..1377914,1377960..1377962,1377990..1377992, 1377999..1378001,1378017..1378025,1378104..1378109, 1378116..1378121,1378128..1378130,1378254..1378256, 1378260..1378262,1378272..1378274,1378278..1378280, 1378308..1378313,1378347..1378355,1378359..1378361, 1378428..1378430,1378434..1378439,1378467..1378478, 1378485..1378487,1378509..1378511,1378521..1378523, 1378542..1378550,1378638..1378640,1378647..1378652, 1378686..1378688,1378698..1378700,1378713..1378721)) /locus_tag="Acear_1295" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:193532" misc_feature complement(order(1377822..1377827,1377900..1377902, 1377909..1377911,1378065..1378076,1378131..1378133, 1378140..1378145,1378239..1378241,1378569..1378571)) /locus_tag="Acear_1295" /note="active site" /db_xref="CDD:193532" misc_feature complement(order(1377822..1377824,1378074..1378076, 1378140..1378145,1378239..1378241,1378569..1378571)) /locus_tag="Acear_1295" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193532" gene 1378873..1379580 /locus_tag="Acear_1296" /db_xref="GeneID:9513339" CDS 1378873..1379580 /locus_tag="Acear_1296" /note="COGs: COG2720 Uncharacterized vancomycin resistance protein; InterPro IPR007391; KEGG: ate:Athe_1099 VanW family protein; PFAM: VanW family protein; SPTR: B9MR96 VanW family protein; PFAM: VanW like protein" /codon_start=1 /transl_table=11 /product="VanW family protein" /protein_id="YP_003827874.1" /db_xref="GI:302392054" /db_xref="GeneID:9513339" /translation="MKNKTLQSIILIIILFLLPLILNSTDPNYHKSKIKRNIKIKLKN QKFNLFSTINFPNQNTLQLNVNKTSKQVSLLSIYTTPLKDDNPQRTNNIRIALQKLNN RIIQPQEEFSFNQQIGNLTPENGYQPAPAIINNRLQPAYGGGVCQASSTLYNTLLQAE LKITERHPHSSPVDYVPQDRDATIVPNVKDLKFKNNKESPILIRSEILENKVVIFLFK IHNSEYSLNRLNKSYSF" misc_feature 1379131..1379523 /locus_tag="Acear_1296" /note="VanW like protein; Region: VanW; pfam04294" /db_xref="CDD:146762" gene complement(1379586..1380578) /locus_tag="Acear_1297" /db_xref="GeneID:9513340" CDS complement(1379586..1380578) /locus_tag="Acear_1297" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827875.1" /db_xref="GI:302392055" /db_xref="GeneID:9513340" /translation="MDSKIQVIQENSDLDETEAELALDLAEGDIEEALQMVDYVDKPF FALHIKFETEGSNKVYGLVNLIGNGKEGEILRLNVITTYKRELWSIGVDINNKVFDRT IEEVKEGSGTTYDKDIRNSFTDELNSAQLFELFTNVKEDCLPGIKGMIRDLLNPIFNK KIELEIGTGLLTKTQLARKTTVEFDDNKEDEEEETENMQLSIYLKSVPVISAIKGCKV KELEIGDEILVRIIDEREVGRYLAELISTEEKGVAVGKITDIHFNEQSDRYTLMLEFG PKIYGKLLVKGEIKIALRDKQEETNIGFELGFPIGLILLFLLLVIIIILLLLYI" gene complement(1380726..1383458) /locus_tag="Acear_1298" /db_xref="GeneID:9513341" CDS complement(1380726..1383458) /locus_tag="Acear_1298" /note="COGs: COG1615 conserved hypothetical protein; InterPro IPR005372; KEGG: hor:Hore_10710 glutamate--cysteine ligase/ amino acid ligase; PFAM: protein of unknown function UPF0182; SPTR: B8CX07 Putative glutamate--cysteine ligase/ amino acid ligase; PFAM: Uncharacterised protein family (UPF0182)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827876.1" /db_xref="GI:302392056" /db_xref="GeneID:9513341" /translation="MNSIRRIIFIIVIAGLILGSLALLGINFYTDWLWFSSIEYLSVF KTIFFTNIWIKLGIMLFFTVFVFINLLITKKEILDYKQREENVEYIDDPLADQRNSFL ELVTSRNLTWVFLGVSILVSLLFSSISSDVWRIVKEFLNSTPFNITDPIFNNDIGFYI FELPFYKFIYQLLTILLVVSGVLSAVIYLFINSKQLLTRNITQGSRAKYHLSVLVALF MLLKAWGYLLSRYDLLYSTRGVAFGASYTDVNASLFALNVLAVLAALVAVFMIINIFT KNLKLVFGGIIVLLVASILLGSIYPQIIQQFNVEPNELTKERPYIKYNIQMTKEAYNL DEIEESPYPVQGKLRYEDIENNPETISNIRLWDSRPLKSTYSQLQEMRLYYNFADIDI DRYEIDGEYRQVMLSPRELNQDQLPSRANTWINRKLKYTHGFGVAMNLANRVSPEGLP DFLIKNIPPKSETDLNITEPRIYYGEQTNNYVVANNQEQEFDYPMGDQNAYNTYQGSG GVQLDSIIKQLAFASRFSSAKMILNGDISSESRLLFYRNIQQRVNKIAPFLSYDSDPY MVIGDDGKLYWMQDAYTTTDMYPYSEPYNNSLNYIRNSVKVVIDAYTGETNFYIIDDS DPLVQTYSKIFPELFKPFAEMSDDLKNHIRYPEDLFKIQTQLYSTYHMTNPTVFYNKE DLWKIPTEKLAGNTVEMQPYYTIMQLPEHKEEEFLLMQPFTPNRKNNMISWLAARSDQ EDYGKLLLYKFPKQRLIYGPMQIESRIDQNSTISRQLSLWDQKGSRVIRGNLLVIPIE DSILYVEPIYLQSDQSDLPEMKRVIVSDGNRVVMARNLDLAFAKLFEGEADAPDVPEE EIEQEIIGVQNLTERALELYNEAQTNLQEGNWTEYGEAIEELRSILEDLKSETE" misc_feature complement(1380735..1383380) /locus_tag="Acear_1298" /note="Uncharacterized conserved protein [Function unknown]; Region: COG1615; cl09133" /db_xref="CDD:186837" misc_feature complement(1381119..1383380) /locus_tag="Acear_1298" /note="Uncharacterised protein family (UPF0182); Region: UPF0182; pfam03699" /db_xref="CDD:146370" gene complement(1383620..1384408) /locus_tag="Acear_1299" /db_xref="GeneID:9513342" CDS complement(1383620..1384408) /locus_tag="Acear_1299" /note="COGs: COG1410 methionine synthase I cobalamin-binding domain; InterPro IPR011005:IPR000489; KEGG: chy:CHY_1227 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; PFAM: dihydropteroate synthase DHPS; SPTR: Q3ACR9 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase; PFAM: Pterin binding enzyme" /codon_start=1 /transl_table=11 /product="dihydropteroate synthase DHPS" /protein_id="YP_003827877.1" /db_xref="GI:302392057" /db_xref="GeneID:9513342" /translation="MIIIGERINGMFNDIGEAIKNEDPEPIQEWAVKQVEAGADYLDA NVGPAVEDSPEVMKWLVEVIQDEVDAPVALDTTNVDAIEAGLEVHEGSAMINSTTAQP EKMESILPLVAEYDANVIGLAMDKSGVPKDAETRTAKAMEIIANADARGIPMENLFID PLILPVNVAQDHAPEVLETIQRVKKLADPAPNTVLGLSNVSQNCNNMKLINRTFLVMA MAVGLDSVIAEANDEDLIDAVATAEIVLNNDVYCDSFLNQFRKK" misc_feature complement(1383680..1384408) /locus_tag="Acear_1299" /note="Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a...; Region: Pterin_binding; cl00219" /db_xref="CDD:197403" misc_feature complement(1383800..1384408) /locus_tag="Acear_1299" /note="Pterin binding enzyme; Region: Pterin_bind; pfam00809" /db_xref="CDD:189727" misc_feature complement(order(1383722..1383724,1383728..1383730, 1383809..1383811,1383821..1383823,1383929..1383931, 1384043..1384045,1384115..1384117,1384121..1384123, 1384184..1384186,1384382..1384384)) /locus_tag="Acear_1299" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29544" misc_feature complement(order(1383695..1383700,1383746..1383748, 1383758..1383760,1383770..1383772,1383872..1383877, 1383887..1383889)) /locus_tag="Acear_1299" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29544" misc_feature complement(1383809..1383817) /locus_tag="Acear_1299" /note="inhibitor binding site; inhibition site" /db_xref="CDD:29544" gene complement(1384450..1385427) /locus_tag="Acear_1300" /db_xref="GeneID:9513343" CDS complement(1384450..1385427) /locus_tag="Acear_1300" /note="COGs: COG2069 CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein); InterPro IPR011005:IPR004486:IPR016041; KEGG: mta:Moth_1198 acetyl-CoA decarbonylase/synthase complex subunit delta; PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; SPTR: C0GF44 CO dehydrogenase/acetyl-CoA synthase, delta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase, delta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase, delta subunit" /codon_start=1 /transl_table=11 /product="acetyl-CoA decarbonylase/synthase delta subunit" /protein_id="YP_003827878.1" /db_xref="GI:302392058" /db_xref="GeneID:9513343" /translation="MAVEIAKQNWDGQVEELTIGATEEEGGTRTSTVTVGGETTLPFL HFEGEIPNKPVVALEILDEEPKDWPEPLAEVWGDVWDDPAKWAKKCVEEYGAELIALR LTSADPIGQDRSAEEIAETVEEVLDAVGVPLIILGCGDEEKDNEILKAAAEAAEGENL LIGFAEEENHSTIAAACMVHDHNVIAQSPVDMNICKQLNILLTDMKVKTNQIVIDPLV SSLGYGMEYSYSVMERIRLGALRDDDMLAMPMINFIGEEAWDVKETQASEEEKPGWGE LSTRGIQWETAMGTTVLQGGADILVARHPESKENIEAGIEELMTESSYE" misc_feature complement(1384453..1385427) /locus_tag="Acear_1300" /note="acetyl-CoA decarbonylase/synthase complex subunit delta; Provisional; Region: PRK04452" /db_xref="CDD:179852" gene complement(1385509..1386264) /locus_tag="Acear_1301" /db_xref="GeneID:9513344" CDS complement(1385509..1386264) /locus_tag="Acear_1301" /note="COGs: COG3640 CO dehydrogenase maturation factor; InterPro IPR002586:IPR014433; KEGG: chy:CHY_1225 CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC; PFAM: cobyrinic acid ac-diamide synthase; SPTR: Q3ACS1 CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain" /codon_start=1 /transl_table=11 /product="cobyrinic acid ac-diamide synthase" /protein_id="YP_003827879.1" /db_xref="GI:302392059" /db_xref="GeneID:9513344" /translation="MNIAVAGKGGTGKTTFTALMIRALIKNDERPILAVDADANANLN EALGMEVQAKITRVLEEFKDKKDEIPPGMDKINYMELQLSSALSEEKDVDLLVMGGPT GSGCYCYPNDLLKKFIDKLNDNYPYMVMDNEAGLEHLSRRTTQDIDALYVISDASARG IRSAGRVKEIVDDLDLKVDQIYLVVTKTTGNELEILQDEIDKTGLEVIGTVPRDEEIL EYDLHGKPLIDLPDESAVVESVEKIVEKTVLAD" misc_feature complement(1385521..1386264) /locus_tag="Acear_1301" /note="CO dehydrogenase maturation factor [Cell division and chromosome partitioning]; Region: CooC; COG3640" /db_xref="CDD:33438" misc_feature complement(1385803..>1386066) /locus_tag="Acear_1301" /note="The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible...; Region: CooC; cd02034" /db_xref="CDD:73297" misc_feature complement(1385563..>1385934) /locus_tag="Acear_1301" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" gene complement(1386331..1388265) /locus_tag="Acear_1302" /db_xref="GeneID:9513345" CDS complement(1386331..1388265) /locus_tag="Acear_1302" /note="COGs: COG3894 Uncharacterized metal-binding protein; InterPro IPR001041:IPR012675; KEGG: dhd:Dhaf_2795 ferredoxin; PFAM: ferredoxin; SPTR: C0GF45 ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain" /codon_start=1 /transl_table=11 /product="ferredoxin" /protein_id="YP_003827880.1" /db_xref="GI:302392060" /db_xref="GeneID:9513345" /translation="MPVINFLLDSEKIEFTCDSGTNLMEAVVEAGIELKAVCGGAGSC GKCQVIVKEGEVNQLAQGSLSPDKLKQGYVLACQTEVIEDVRIEIPPESRLSEHQIFV AEEAEDEELLTEKEIQIAEKIELDPLYKRVDLELDEPTLVNNASDLDRLYTGLNQRHD WPGLTTSLSVMEDLASHLRDNNWQTQVSLALANDNYEVSELNAPDYEQPDYGIAVDIG TTTMVLELINLETGESVATSGLYNKQGRYGDDVIGRINYAKQNDDGLDKLHQAVIDTI NELIDDVVNKESIDYADIKTAVFAGNTTMSHLFLGIDPNNIRLEPYIPTVNFIPPLQA EELGIKIKEEGWIHYLPGVSSFVGGDITSGVLATEIGKREEITLFIDIGTNGELVLGN QDWLITCSCSAGPAFEGGGIEYGMRAMSGAIEFFEIDEDTYEIKYSTINARPPIGVCG SGLIKLIATLNEVGIINRSGKFESDFEHERLREREYETEFVLVWEEQAGIDEDIVITE NDIKNLLRSKGAIYAGIRMMLQNMSLTEDFIEEVLVAGGFGNYINIDDAKKIGLLPDL PNDKFKFVGNTSLKGAKMSLLSKEKFDQVNEIANKMTYLELSAEDQSQEFMDEFVSAQ FIPHTDLSLFPSVTETNSDD" misc_feature complement(1386385..1388265) /locus_tag="Acear_1302" /note="Uncharacterized metal-binding protein [General function prediction only]; Region: COG3894" /db_xref="CDD:33682" misc_feature complement(1388002..1388256) /locus_tag="Acear_1302" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature complement(order(1388035..1388040,1388125..1388136, 1388140..1388142,1388152..1388154,1388161..1388166)) /locus_tag="Acear_1302" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature complement(order(1388035..1388037,1388125..1388127, 1388134..1388136,1388152..1388154)) /locus_tag="Acear_1302" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" gene complement(1388305..1389657) /locus_tag="Acear_1303" /db_xref="GeneID:9513346" CDS complement(1388305..1389657) /locus_tag="Acear_1303" /EC_number="2.1.1.-" /note="COGs: COG1456 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein); InterPro IPR011005:IPR007202:IPR016041:IPR016218; KEGG: dae:Dtox_1272 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; Fe-S cluster domain protein; SPTR: C0GF46 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; PFAM: Putative Fe-S cluster; CO dehydrogenase/acetyl-CoA synthase delta subunit" /codon_start=1 /transl_table=11 /product="acetyl-CoA decarbonylase/synthase gamma subunit" /protein_id="YP_003827881.1" /db_xref="GI:302392061" /db_xref="GeneID:9513346" /translation="MGLSSLEIYKKLPQTNCGDCGHPTCMAFAMQLAEDKASLDECPD VSDEAREALAAAAAPPITDITIGVGDYERTLGEETEIFRHDKTFFNETGVAISVSDAA DAEAIEERVEQIDQLTFERVGQVIEVDMVAVTNDSDDAASFKEAVEIVADNTDRILIL VSEDVEAVENALEVVADRNPLIYAATEDNYEEMTEVAKENECPLAVKGEDLNSLAELA EKVKDLDYENLVIDSGARNASQVLADQTVIRRKCINDKFRPFAFPTITFASGETPAQE IAQASTYIAKYAGIVVLSETVELSEMLPVLTVRQNIYNDPRVPVTVEPNQVNEIGEPD EKSPVIITTNFSLTYYSVEGEIPSDAYIIPIDTDGTSLLTAWAADKFGGKKIAEIVNE ETDIGDRVDHNKLTISGHVAVISGKLEEESGWDVVVGPREASGLTNFIANRWEDELEA " misc_feature complement(1388323..1389657) /locus_tag="Acear_1303" /note="acetyl-CoA decarbonylase/synthase complex subunit gamma; Provisional; Region: PRK04165" /db_xref="CDD:179760" misc_feature complement(1389529..1389624) /locus_tag="Acear_1303" /note="Putative Fe-S cluster; Region: FeS; pfam04060" /db_xref="CDD:112857" gene complement(1389766..1391928) /locus_tag="Acear_1304" /db_xref="GeneID:9513347" CDS complement(1389766..1391928) /locus_tag="Acear_1304" /EC_number="2.3.1.169" /note="COGs: COG1614 CO dehydrogenase/acetyl-CoA synthase beta subunit; InterPro IPR011254:IPR004461:IPR016099; KEGG: chy:CHY_1222 bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; PRIAM: CO-methylating acetyl-CoA synthase; SPTR: C0GF47 CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit" /codon_start=1 /transl_table=11 /product="CO dehydrogenase/acetyl-CoA synthase complex, beta subunit" /protein_id="YP_003827882.1" /db_xref="GI:302392062" /db_xref="GeneID:9513347" /translation="MSKDRDMRELAGKTNVCKAAIEGAIVATGYAEIKLQRALANYGP DTEVAFPTTGYELPFISGLGGDKVTKLGELPSVLNKYKKNIQHKYDLEHAKLAGETTA IAAEIIEALKYVEEEKPYEDEIYMGFVNDKILREYGIDLVDFTIPGEAVIMGKADDPE KLAEMINELQSMGILTFLCDEVVDQAVDQGVKMGVEFYTLPLGHFTQVVHAVNFAMRS ALAFGGEERGDYDAVLDYIRERIRGFVIALGDQDEVEMAAQMAASHLGMPTITNQDDV EEIEDRYIVEEDYDEMVQLGLELRDIHIEIVDIPVPITVGAAFEGQQIRSDDMYVEFG GQRTTAFELVKKRDKDEVEDGNVELIGPDIDEVEEGGQLPLGIMVDIYGRDMQEDFEG VLERQTHHFCNYGEGLWHMGQRDINWIRISKEAKEAGFTIKGIGEILYAKFKSEFPSI IDRLQIRLITDQDKVEEKLEEAKARYDKRDERMEKLSDESVDVFYDCTLCQSFAPDHV CVVTPDRVGLCGAISWLDAQAAYEIDPAGPNQPIELGETIDEEKGQWEGCNKRTEKES GGNVTEVNLYSMMESPMTSCGCFEAIMAMVPEANGIMIVNREHGGQTPVGMTFSTLAG SVGGGNQTPGFMGIGKTYVTSDKFIQADGGIARIIWMPKEFKEQLEDDIKQRAKEEGL GEDFYDKIADETVGTAAEEILPYLQEKGHPALDMDPLM" misc_feature complement(1389769..1391895) /locus_tag="Acear_1304" /note="bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; Reviewed; Region: PRK09529" /db_xref="CDD:181932" misc_feature complement(1391017..1391871) /locus_tag="Acear_1304" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" misc_feature complement(order(1391167..1391172,1391851..1391856, 1391863..1391868)) /locus_tag="Acear_1304" /note="ACS interaction site; other site" /db_xref="CDD:73219" misc_feature complement(order(1391167..1391175,1391833..1391835, 1391842..1391844,1391854..1391856,1391863..1391865)) /locus_tag="Acear_1304" /note="CODH interaction site; other site" /db_xref="CDD:73219" misc_feature complement(order(1391167..1391169,1391173..1391175, 1391314..1391316,1391386..1391388,1391464..1391466)) /locus_tag="Acear_1304" /note="metal cluster binding site [ion binding]; other site" /db_xref="CDD:73219" misc_feature complement(1389769..1391007) /locus_tag="Acear_1304" /note="CO dehydrogenase/acetyl-CoA synthase complex beta subunit; Region: CdhC; cl11685" /db_xref="CDD:187145" gene complement(1391983..1393932) /locus_tag="Acear_1305" /db_xref="GeneID:9513348" CDS complement(1391983..1393932) /locus_tag="Acear_1305" /EC_number="1.2.7.4" /EC_number="1.2.99.2" /note="COGs: COG1151 6Fe-6S prismane cluster-containing protein; InterProIPR011254:IPR010047:IPR004137:IPR016101:IPR 016099; KEGG: chy:CHY_1824 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; PRIAM: carbon-monoxide dehydrogenase (acceptor); SPTR: P59934 carbon monoxide dehydrogenase 1; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit" /codon_start=1 /transl_table=11 /product="carbon-monoxide dehydrogenase, catalytic subunit" /protein_id="YP_003827883.1" /db_xref="GI:302392063" /db_xref="GeneID:9513348" /translation="MVFEKETIDPAAQEMLQVAEEEGRETTWDLREQMEPQCGFGDTG VCCNICLQGPCRVNPNYNEKGNQKGICGARDYTIVARNLVRHTVGGTSSHSGHARHVA ELFREVAEGHVDSYEVKDKEKLMKVADKLEIETEDRETNEIAKEVAEEAIGNFIGFHG EELSWLEPMVPESRYQIFNECNIIPTGINDAINEAMHRTAMGVDSDPLNLIFGNLQTA LADFTGCTIGTDLSDIIFGTPEVVESEANLGVLDEDAVNVIVHGHEPVLSEKVVAAAK KLEDEAKEAGAENGINVAGICCTGNELLMRQGVPLATNFASQELAIMTGAVDAMVVDI QCIMPSIQSVANCYHTEIITTIPFSKISGAKHIEFNDSTADQDAEEIVRTAIEAYKER PKEINIPDYKSKLMAGFSFEEIENILSQVNEDDPLSVINDAIDEGDIKGICLFAGCNN TKVTHDKNHTEVAKGLVENDVLCVATGCVANALGKAGFMLPEAVEEYAGEGLKRFFSK LNEELGKELPLIWHMGSCVDNSRLIEFVTALANHKGVDIGEYPIVASAPEPMHEKAVS IGSWCVTIGLTTHVGVLPQITGSRLVTEVATKVAKDVYDGYFILESDPEAAVEELVAE LDERTWVQDMKAKVLASDKYTTERY" misc_feature complement(1392043..1393914) /locus_tag="Acear_1305" /note="carbon-monoxide dehydrogenase, catalytic subunit; Region: CO_DH_cata; TIGR01702" /db_xref="CDD:130763" misc_feature complement(1392043..1393908) /locus_tag="Acear_1305" /note="Carbon monoxide dehydrogenase (CODH) is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA, respectively. CODH has two types of metal clusters, a cubane [Fe4-S4] center (B-cluster) similar to...; Region: CODH; cd01915" /db_xref="CDD:29677" misc_feature complement(order(1392043..1392045,1392052..1392054, 1392124..1392129,1392139..1392141,1392151..1392153, 1392160..1392162,1392244..1392249,1392253..1392255, 1392835..1392843,1392847..1392849,1392853..1392855, 1392859..1392864,1392895..1392897,1392913..1392930, 1393306..1393308,1393315..1393335,1393339..1393344, 1393351..1393356,1393366..1393368,1393387..1393398, 1393405..1393407,1393654..1393659,1393666..1393671, 1393675..1393677,1393687..1393689,1393717..1393728, 1393759..1393761,1393765..1393785,1393795..1393797, 1393822..1393824,1393831..1393836,1393843..1393845, 1393858..1393860)) /locus_tag="Acear_1305" /note="ACS interaction site; other site" /db_xref="CDD:29677" misc_feature complement(order(1392244..1392255,1392847..1392849, 1392853..1392864,1392904..1392906,1392916..1392930, 1393306..1393308,1393309..1393335,1393339..1393344, 1393351..1393356,1393636..1393638,1393645..1393647, 1393657..1393659,1393666..1393668,1393678..1393680, 1393687..1393689,1393717..1393728,1393765..1393788, 1393795..1393797,1393801..1393803,1393810..1393812, 1393822..1393827,1393831..1393836,1393840..1393845, 1393858..1393860)) /locus_tag="Acear_1305" /note="CODH interaction site; other site" /db_xref="CDD:29677" misc_feature complement(order(1393720..1393722,1393768..1393770, 1393783..1393785,1393792..1393794)) /locus_tag="Acear_1305" /note="cubane metal cluster (B-cluster) [ion binding]; other site" /db_xref="CDD:29677" misc_feature complement(order(1392244..1392246,1392250..1392252, 1392355..1392357,1392499..1392501,1392589..1392594, 1392925..1392927,1393039..1393041,1393144..1393146)) /locus_tag="Acear_1305" /note="Ni-Fe-S cluster (C-cluster) [ion binding]; other site" /db_xref="CDD:29677" gene complement(1394079..1394849) /locus_tag="Acear_1306" /db_xref="GeneID:9513349" CDS complement(1394079..1394849) /locus_tag="Acear_1306" /note="COGs: COG3640 CO dehydrogenase maturation factor; InterPro IPR002586:IPR014433; KEGG: dae:Dtox_1269 cobyrinic acid ac-diamide synthase; PFAM: cobyrinic acid ac-diamide synthase; SPTR: C1TIB8 CO dehydrogenase maturation factor; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain" /codon_start=1 /transl_table=11 /product="cobyrinic acid ac-diamide synthase" /protein_id="YP_003827884.1" /db_xref="GI:302392064" /db_xref="GeneID:9513349" /translation="MKIAISGKGGVGKTTIAAALSKLFAKDDYQVFAVDADPDANLAT TLGIPAEDAVDLKPLVELEDVIKDKNADGGSLVNLNPNVEDVLDDYAYNLKNIKFVRM GDAKQGGSECYCKENSFLRSLVESLLVDKDEVVILDMGAGIEHLSRGTAQDVDCLIVV IEPSQTSIETANIVKEMAVDLEIPKVKIVANKVYDDQAKELIANNFSDEDILGYIPFN QEILASFMDLQEVGQLYDALDMEDIYNNLLDKVGGEIE" misc_feature complement(1394097..1394849) /locus_tag="Acear_1306" /note="CO dehydrogenase maturation factor [Cell division and chromosome partitioning]; Region: CooC; COG3640" /db_xref="CDD:33438" misc_feature complement(1394367..1394846) /locus_tag="Acear_1306" /note="The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible...; Region: CooC; cd02034" /db_xref="CDD:73297" misc_feature complement(1394808..1394831) /locus_tag="Acear_1306" /note="P-loop; other site" /db_xref="CDD:73297" misc_feature complement(1394202..>1394471) /locus_tag="Acear_1306" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" gene complement(1395107..1395799) /locus_tag="Acear_1307" /db_xref="GeneID:9513350" CDS complement(1395107..1395799) /locus_tag="Acear_1307" /note="InterPro IPR002035; KEGG: bbe:BBR47_05740 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: C0ZKA0 Putative uncharacterized protein; PFAM: von Willebrand factor type A domain" /codon_start=1 /transl_table=11 /product="von Willebrand factor type A" /protein_id="YP_003827885.1" /db_xref="GI:302392065" /db_xref="GeneID:9513350" /translation="MKLKHNIALLMIISIFLLAVIGITELPFNQPQNMKVDQRQLPTF TDANNVEIIWDVSGSMWGKVEKNKKYLRAKKALKDIVMMIPDHVNIGLRTFGKGEDSD RSTNLVVNIATNNKSTLLAKINNLKPAGKSPIGKALSQAGVDLINLDGNNHILLVTDG RDTGNIVPSRVADRLSKNGIYIHVLKIGAVGNQQRAVLKSIARLGGGRYFTYSERHAV VPTMNLVESTDN" misc_feature complement(1395173..1395664) /locus_tag="Acear_1307" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cl00057" /db_xref="CDD:197401" misc_feature complement(order(1395323..1395325,1395404..1395406, 1395635..1395637)) /locus_tag="Acear_1307" /note="metal ion-dependent adhesion site (MIDAS); other site" /db_xref="CDD:29222" gene complement(1395902..1397554) /locus_tag="Acear_1308" /db_xref="GeneID:9513351" CDS complement(1395902..1397554) /locus_tag="Acear_1308" /note="COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160:IPR003018; KEGG: hor:Hore_12380 diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein; SPTR: B8CXG9 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain" /codon_start=1 /transl_table=11 /product="diguanylate cyclase with GAF sensor" /protein_id="YP_003827886.1" /db_xref="GI:302392066" /db_xref="GeneID:9513351" /translation="MAILLKRKAMNMKETGLFVIKFFIVGGIICSFILIIDKLYQVKA VEEVKDEKTDKLNKSLKNLNFISKLTQEVVNPSIDLYQTLELIVDMTCEILEVEAGGI MILDDDKEYISYKAVNNIEPGFIPEKISEDVLELISDEQELIVNNGLRLDKKFGFIKE SGYDDLLAVPLIENNEEQDEIYGILFTASKNEFQQQELKMMNTLATQVVCLIKGNKLF ERMQRNVAELSTLQMISTTINSTLDLDQVLELAIDVIVGTMGVSSCATLLFDEDREEL SLEASRGWPDKSDKKEVFNMESNFFGRIIESQEIVVFNEVPDKVKEELNFLEMKSAIA VPLRLRDDVIGIITAVNTMISHSFNGDDERFLNTLANQIAIAIENARMYNQMEEQAIK DGLTQLYNYSYFQHALSEEIDRAKRYQQDLSLLLLDIDDFKEINDTYGHLVGDKVLEE LSTILKKTTRKIDIVARYGGEEFAIILPETDIEGARLLGSRINDQVRDMVVEEKGLEL KITVSIGAAAYNQGITQKDLINNADRSLYRAKTEGKDKVCIN" misc_feature complement(1396385..1396876) /locus_tag="Acear_1308" /note="FOG: GAF domain [Signal transduction mechanisms]; Region: FhlA; COG2203" /db_xref="CDD:32385" misc_feature complement(1396394..1396828) /locus_tag="Acear_1308" /note="GAF domain; Region: GAF; cl00853" /db_xref="CDD:193954" misc_feature complement(1395911..1396378) /locus_tag="Acear_1308" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(1396142..1396144,1396271..1396273)) /locus_tag="Acear_1308" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(1396139..1396150,1396154..1396156, 1396220..1396222,1396232..1396234,1396244..1396249, 1396256..1396258)) /locus_tag="Acear_1308" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(1396082..1396084,1396166..1396168)) /locus_tag="Acear_1308" /note="I-site; other site" /db_xref="CDD:143635" gene complement(1397622..1397750) /locus_tag="Acear_1309" /db_xref="GeneID:9513352" CDS complement(1397622..1397750) /locus_tag="Acear_1309" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827887.1" /db_xref="GI:302392067" /db_xref="GeneID:9513352" /translation="MDMEEVRFAELDESQIQKLNKMEETLADRKDQKVILLAYEQE" gene complement(1397857..1398282) /locus_tag="Acear_1310" /db_xref="GeneID:9513353" CDS complement(1397857..1398282) /locus_tag="Acear_1310" /note="COGs: COG1661 DNA-binding protein with PD1-like DNA-binding motif; InterPro IPR005175; KEGG: hor:Hore_10920 predicted DNA-binding protein with PD1-like DNA-binding motif; PFAM: protein of unknown function DUF296; SPTR: C5HLA7 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF296)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827888.1" /db_xref="GI:302392068" /db_xref="GeneID:9513353" /translation="MVREYEIENVYMGRLPHGSDLIESLIEIVKEKGIETGKVTVIGA VKEATISFYDQKEEEYNDKQFTDELEIVNCNGNISLKDGEPIIHAHISFGDEEGNLFG GHLAEGTTVFAGEYIIEEYTGEAFVRGYDEITGLPLWQE" misc_feature complement(1397899..1398258) /locus_tag="Acear_1310" /note="Domain of unknown function (DUF296); Region: DUF296; cl00720" /db_xref="CDD:193917" gene complement(1398299..1398622) /locus_tag="Acear_1311" /db_xref="GeneID:9513354" CDS complement(1398299..1398622) /locus_tag="Acear_1311" /note="InterPro IPR010652; KEGG: hor:Hore_22250 protein of unknown function (DUF1232); PFAM: protein of unknown function DUF1232; SPTR: B8D0N4 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1232)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827889.1" /db_xref="GI:302392069" /db_xref="GeneID:9513354" /translation="MKISSIFRWGSVIRRLIGFLKDKEVSKLKKLLLILPIIYVVSPI DLVSDFIPIFGWLDDAVVLTVVWNFFLQELKEYELKDNTAVNQNDDNNRTDDYTLSKD DYQIN" misc_feature complement(1398380..>1398514) /locus_tag="Acear_1311" /note="Protein of unknown function (DUF1232); Region: DUF1232; cl01318" /db_xref="CDD:194100" gene complement(1398814..1400148) /locus_tag="Acear_1312" /db_xref="GeneID:9513355" CDS complement(1398814..1400148) /locus_tag="Acear_1312" /note="KEGG: amt:Amet_4635 hypothetical protein; SPTR: A6TWY8 Putative uncharacterized protein; PFAM: Glutathionylspermidine synthase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827890.1" /db_xref="GI:302392070" /db_xref="GeneID:9513355" /translation="MLEEAVVEYHNLLAEEPDKYARDLEKIYHKLEAENIYYHGEVIP ILYQPLFFSQSEIDQISRLTAKLSSILTKVINRYLVDEEFRSYFGFSQELEDLILANP GYSSPVPMARFDIFYYGEEDYKFCELNTDGSSGMVKTNVLEKKFLQAEGIKGLTEKTD YNFAYCELLDEWLDILLANYQEFNPEDDSPNIAIMDFDNLGMVSEFEYFRVLLQNSGY RTVIVDPRELKYENNKLYYGGLEIDLIYRRAVTIDIMEYYSEIEDLLAAYYNQDVCIV GSFRSQIIHNKIIFAILHDEDKTGFLDKEDRRFIEEYIPETALITKERQQLNYIKDNR EELVLKPLDFYGAQGVYIGCDLTPSQWEDALNNIQPEQYLVQKFCSIPELEMAVLEED ELRLESFKYTLGLFMYNLSFAGIYTRAGKDNLIASSTGCVTLPNFVVGENRI" misc_feature complement(1399102..1400004) /locus_tag="Acear_1312" /note="Glutathionylspermidine synthase; Region: GSP_synth; cl00503" /db_xref="CDD:193843" misc_feature complement(<1399021..1399221) /locus_tag="Acear_1312" /note="Domain of unknown function (DUF407); Region: DUF407; pfam04174" /db_xref="CDD:112964" gene complement(1400142..1401464) /locus_tag="Acear_1313" /db_xref="GeneID:9513356" CDS complement(1400142..1401464) /locus_tag="Acear_1313" /EC_number="6.3.2.2" /note="COGs: COG3572 Gamma-glutamylcysteine synthetase; InterPro IPR006336; KEGG: aoe:Clos_0252 glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2; PRIAM: glutamate--cysteine ligase; SPTR: A8MKZ8 glutamate--cysteine ligase; PFAM: glutamate-cysteine ligase family 2(GCS2); TIGRFAM: glutamate--cysteine ligase, plant type" /codon_start=1 /transl_table=11 /product="glutamate--cysteine ligase" /protein_id="YP_003827891.1" /db_xref="GI:302392071" /db_xref="GeneID:9513356" /translation="MDYKEQLDRFEAYFKSSEKNKENKAVGLEIEHFVVDSDTLKTVS YSEEAGIEKILAQLVRQGWEGRREGNHLIQANKEGAVITLEPGGQLEISIEPERRITD LEDRYYAFLKELLPILNQNNQLLITAGYQIESKISEIEWNPKKRYQIMSKYLGKRGKY AHNMMKGTASIQVALDYINETDFIKKFRIANTLAPAVAALFDNAAFFESEEYEAYNIR TDIWSHCDPDRCGTVKEAFDKDFNYRKYAEYILNRSPILLKQGSEFISAGQKTCRDIF KTQDLSQKELEHVLTMFFPDVRAKNFIEIRMIDSIPPKLNFAAVAFWKGLLYNDQNLE RVSKLIADITYEEVQKAREDVVKKGLVAKLDNYQVLELGKRLLQWAKEGLPDVEKEYL ISLEKLLSDNKTPVDKTREKLAAGFDKRQAIDWLILNSRLETEVKKEC" misc_feature complement(1400229..1401452) /locus_tag="Acear_1313" /note="Glutamate-cysteine ligase family 2(GCS2); Region: GCS2; cl00954" /db_xref="CDD:186280" gene 1401604..1401987 /locus_tag="Acear_1314" /db_xref="GeneID:9513357" CDS 1401604..1401987 /locus_tag="Acear_1314" /note="InterPro IPR004360; KEGG: lin:lin2271 hypothetical protein; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: A8UCX4 glyoxalase I/lactoylglutathione lyase; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase" /codon_start=1 /transl_table=11 /product="glyoxalase/bleomycin resistance protein/dioxygenase" /protein_id="YP_003827892.1" /db_xref="GI:302392072" /db_xref="GeneID:9513357" /translation="MNYNFVHTCIRVLDLEESKAFYKNALNLEVARERDFPEDKFTLV YMKRPNDSFELELTYNYDREEPYTIGDGYSHLAVTVDNLKASYQQHKDAGYEVGDIKS LNEEAEGGYYFLTDPDGYRIEVIQK" misc_feature 1401616..1401978 /locus_tag="Acear_1314" /note="Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione; Region: Glyoxalase_I; cd07233" /db_xref="CDD:176659" misc_feature order(1401616..1401630,1401634..1401636,1401646..1401651, 1401658..1401663,1401670..1401675,1401682..1401684, 1401691..1401693,1401700..1401705,1401733..1401735, 1401745..1401747,1401760..1401762,1401766..1401771, 1401781..1401786,1401817..1401846,1401868..1401870, 1401961..1401963,1401970..1401972) /locus_tag="Acear_1314" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:176659" misc_feature order(1401622..1401624,1401634..1401636,1401709..1401711, 1401724..1401726,1401730..1401732,1401769..1401771, 1401775..1401777,1401781..1401783,1401826..1401828, 1401904..1401906,1401934..1401936,1401940..1401942, 1401964..1401966,1401970..1401972) /locus_tag="Acear_1314" /note="active site" /db_xref="CDD:176659" misc_feature order(1401622..1401624,1401769..1401771,1401826..1401828, 1401970..1401972) /locus_tag="Acear_1314" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:176659" misc_feature order(1401634..1401636,1401709..1401711,1401724..1401726, 1401730..1401732,1401775..1401777,1401781..1401783, 1401904..1401906,1401934..1401936,1401940..1401942, 1401964..1401966) /locus_tag="Acear_1314" /note="glutathione binding site [chemical binding]; other site" /db_xref="CDD:176659" gene complement(1402102..1403598) /locus_tag="Acear_1315" /db_xref="GeneID:9513358" CDS complement(1402102..1403598) /locus_tag="Acear_1315" /note="COGs: COG4399 conserved hypothetical protein; InterPro IPR007383; KEGG: cbi:CLJ_B0114 hypothetical protein; PFAM: protein of unknown function DUF445; SPTR: B1QIT7 Putative uncharacterized protein; PFAM: protein of unknown function (DUF445)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827893.1" /db_xref="GI:302392073" /db_xref="GeneID:9513358" /translation="MNLTFVVSPLVGSVIGYCTNWVAVKMLFKPLEEKRILGMKVPFT PGVIPRRRGKLAESIGDAVGEELLTPDAFHEILQGEDMKEKIQGFVNERIKSLKEEER NLQELLDLAVSNSDDREELKAEMKKMISTGIKGLLDKEEIMSVVKKELAQIDIERLED YLASDEYQDFKNKLSTFLLSNLYRDSTKEGLLVFLNNRLERIKDNQKTVSDFLPDGMN ENLSEWLSDQGPEFVEKLISFLDSETAKERINKKLDEALGSNSVMQMVGGFLDKEKIV NQFIDYIVKFLEEPESQKEIIAKLDEFLDSIFETEAAVIIDKFDDEDLIEVIDFILEK TATEEVVDKLFNSLEESVVDKLAKKDLTNNDKIITVIEELIEKVIESDFLSAKIESWV DQQLDKLSERPVRYYFNKLDAVTLQKVELGVVGSLEYIIENHLGRVLSTLDFKEMVIK KVNDFDILEVENLLLSVIETELNAITWFGAVLGLIMGLITPFISVLFS" misc_feature complement(1402108..1403568) /locus_tag="Acear_1315" /note="Protein of unknown function (DUF445); Region: DUF445; pfam04286" /db_xref="CDD:190933" gene 1404413..1406023 /locus_tag="Acear_1316" /db_xref="GeneID:9513359" CDS 1404413..1406023 /locus_tag="Acear_1316" /note="COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766; KEGG: hor:Hore_08220 pyruvate oxidase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: B8CWB0 Pyruvate oxidase; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain" /codon_start=1 /transl_table=11 /product="thiamine pyrophosphate protein TPP binding domain protein" /protein_id="YP_003827894.1" /db_xref="GI:302392074" /db_xref="GeneID:9513359" /translation="MENRNLTDVIIEQLDKWNVEHIYGYSGDTILEFFSALSNSPIKL YTSKHEGTAGLMASAEAKLNDELAVCVAHSGPGTANIINGIGDAYSDRVPLLLITGQV PTWNIGTDYKQFVNQLELTKPLTVFSSLVTNPDSIVDLMVKAMTMSIVNGGVSHLAIP MDLWQAETTAVPREYPSHLNKKEIPKEKIINKAVDRINQANKPVILYGRGAKECKKGL KELAQQIDGGLIYTLPAKGIISDNCPLSLGGLGLAGSDIASQLLNEADLIINFGATWW PMDYVPRQPEVIQFDTVKENIGLAHPVELGILGDIKKSITSLLKKLPEKDNQAWRSEI SSARKTWLDSLEESVEVAETPLTPQSVIQTISNKTTENEIISLDSGDNVVWFGKYFTD QCQDVLVSGSWRTMGFGVPASLAAKINQPEAPVTSITGDGGISMVLAEILTAVRYDLP VRIIIMNNGTLAMERNRMTTADLIPEEVDLTNPDFVQFAESCNAQGFRPESISELENI LEQTQQLNEVAVIDVPTQASTVPGTKLM" misc_feature 1404425..1404913 /locus_tag="Acear_1316" /note="Pyrimidine (PYR) binding domain of POX; Region: TPP_PYR_POX; cd07039" /db_xref="CDD:132922" misc_feature 1404434..1405987 /locus_tag="Acear_1316" /note="Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]; Region: IlvB; COG0028" /db_xref="CDD:30378" misc_feature order(1404473..1404475,1404488..1404490,1404494..1404496, 1404503..1404505,1404512..1404517,1404548..1404559, 1404566..1404568,1404578..1404580,1404587..1404592, 1404596..1404601,1404638..1404640,1404647..1404649, 1404659..1404661,1404668..1404673,1404680..1404685, 1404905..1404907) /locus_tag="Acear_1316" /note="PYR/PP interface [polypeptide binding]; other site" /db_xref="CDD:132922" misc_feature order(1404488..1404490,1404494..1404496,1404503..1404505, 1404512..1404517,1404548..1404559,1404563..1404565, 1404638..1404640,1404647..1404652,1404659..1404661, 1404668..1404670,1404758..1404760,1404764..1404766, 1404770..1404772,1404794..1404796,1404839..1404841, 1404848..1404850,1404905..1404907) /locus_tag="Acear_1316" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:132922" misc_feature order(1404488..1404490,1404494..1404496,1404503..1404505, 1404512..1404517,1404548..1404559,1404563..1404565, 1404638..1404640,1404647..1404652,1404659..1404661, 1404668..1404670,1404770..1404772,1404905..1404907) /locus_tag="Acear_1316" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132922" misc_feature order(1404488..1404490,1404560..1404562,1404629..1404631, 1404650..1404652) /locus_tag="Acear_1316" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132922" misc_feature 1404989..1405342 /locus_tag="Acear_1316" /note="Thiamine pyrophosphate enzyme, central domain; Region: TPP_enzyme_M; pfam00205" /db_xref="CDD:189448" misc_feature 1405475..1405987 /locus_tag="Acear_1316" /note="Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. These enzymes include, among others, the E1 components of the pyruvate, the acetoin...; Region: TPP_enzymes; cl01629" /db_xref="CDD:194179" misc_feature order(1405628..1405630,1405700..1405711,1405784..1405786, 1405790..1405792) /locus_tag="Acear_1316" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:48162" gene complement(1406028..1406876) /locus_tag="Acear_1317" /db_xref="GeneID:9513360" CDS complement(1406028..1406876) /locus_tag="Acear_1317" /note="COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: tpd:Teth39_1645 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B0KB98 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component" /codon_start=1 /transl_table=11 /product="nitrate/sulfonate/bicarbonate ABC transporter permease" /protein_id="YP_003827895.1" /db_xref="GI:302392075" /db_xref="GeneID:9513360" /translation="MSMFERIKAVLNKYLTKDSVTDEHGKYLKKMRLRKISINTLQIL ILAALIIGWQLAAKYKIVDPFITSYPSQIIKTIYEMSLNGELFKHIWVTVYETLIGFL LGATGGLVIASILWWSDYLSQIFEPFIIVLNALPKMALGPVLIIWLGNGTIAIIGMAL LISIIVTIVMVYNGFKETDQNKIKLLRTLGADKFQIFKKVVLPDNLPTIFGALKVNIG LSLVGTIVGEFLVSEAGLGYLIVYGGQVFKLDLVMTSVIILSVLAGLLYYLVAWLEKK IINWEE" misc_feature complement(1406082..1406609) /locus_tag="Acear_1317" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(1406082..1406087,1406094..1406099, 1406106..1406111,1406115..1406120,1406127..1406132, 1406160..1406165,1406190..1406195,1406202..1406213, 1406232..1406234,1406241..1406246,1406286..1406288, 1406337..1406339,1406346..1406351,1406361..1406363, 1406367..1406372,1406379..1406381,1406385..1406387, 1406391..1406396,1406442..1406444,1406448..1406453, 1406460..1406489,1406493..1406504,1406529..1406531, 1406544..1406549,1406556..1406561)) /locus_tag="Acear_1317" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(1406196..1406213,1406442..1406486)) /locus_tag="Acear_1317" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature complement(order(1406130..1406132,1406160..1406162, 1406169..1406171,1406193..1406195,1406409..1406411, 1406442..1406444)) /locus_tag="Acear_1317" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature complement(order(1406265..1406267,1406277..1406282, 1406298..1406336)) /locus_tag="Acear_1317" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene complement(1406863..1407630) /locus_tag="Acear_1318" /db_xref="GeneID:9513361" CDS complement(1406863..1407630) /locus_tag="Acear_1318" /note="COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: aoe:Clos_2093 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8MIJ7 ABC transporter related; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="nitrate/sulfonate/bicarbonate ABC transporter ATPase" /protein_id="YP_003827896.1" /db_xref="GI:302392076" /db_xref="GeneID:9513361" /translation="MNKIQFKEVGMKYHTVAEETEALKDLSFSVEENEFVSLVGPSGC GKTTALSLVSGLLSPTSGQVTIDGKRVKGIDEKVGYMLQEDYLFPWRTILDNILIGLE VKDELTAKSRQKARQLLADYGLEGFADYYPTQLSGGMRQRVALARTLIFEPEILLLDE PFSALDYHTKLTLEDEVAQILRNKEKTVVLVTHDIAEAVAMSDRVLVFTERPGSIKEE YKIDLAISGDFSTFKAREAEEFRYYFNSIWEELDVYV" misc_feature complement(1406878..1407630) /locus_tag="Acear_1318" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]; Region: TauB; COG1116" /db_xref="CDD:31313" misc_feature complement(1406962..1407621) /locus_tag="Acear_1318" /note="NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars...; Region: ABC_NrtD_SsuB_transporters; cd03293" /db_xref="CDD:73052" misc_feature complement(1407490..1407513) /locus_tag="Acear_1318" /note="Walker A/P-loop; other site" /db_xref="CDD:73052" misc_feature complement(order(1407052..1407054,1407151..1407156, 1407382..1407384,1407487..1407495,1407499..1407504)) /locus_tag="Acear_1318" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73052" misc_feature complement(1407382..1407393) /locus_tag="Acear_1318" /note="Q-loop/lid; other site" /db_xref="CDD:73052" misc_feature complement(1407199..1407228) /locus_tag="Acear_1318" /note="ABC transporter signature motif; other site" /db_xref="CDD:73052" misc_feature complement(1407151..1407168) /locus_tag="Acear_1318" /note="Walker B; other site" /db_xref="CDD:73052" misc_feature complement(1407133..1407144) /locus_tag="Acear_1318" /note="D-loop; other site" /db_xref="CDD:73052" misc_feature complement(1407046..1407066) /locus_tag="Acear_1318" /note="H-loop/switch region; other site" /db_xref="CDD:73052" gene complement(1407644..1408633) /locus_tag="Acear_1319" /db_xref="GeneID:9513362" CDS complement(1407644..1408633) /locus_tag="Acear_1319" /note="COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: hor:Hore_11510 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; SPTR: B8CX84 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: NMT1/THI5 like" /codon_start=1 /transl_table=11 /product="nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein" /protein_id="YP_003827897.1" /db_xref="GI:302392077" /db_xref="GeneID:9513362" /translation="MKKLLTVGLVMVLLVGTSLTGLAATEVRLNEVVHSIFYTPQYVA LHKGFFKQEGLKVELSTAWGGDKAATALMSDHADIALIGPEPSIYIYQRGADNHPINF AQLTQKAGSFLLAREPMPDFMLEDLRGKKVIGNRPGGAPEMVMEYVLRHNGIEPFEDV QINTSLDFSANAPAFKNGLGDFVQLFEPKASKLEKMGAGYVVASFGELGGKVPYTAYM ACKDYIADNPEVIQKFTNAVYRAQKWTYDHSAKEIAEVIKPSFSELEDDILVKVVKRY KGQNTWAHNPILSKSELDYWQDIIMEADELDKKVDYEVIVDTKFAEEAVKNTE" misc_feature complement(1407890..1408519) /locus_tag="Acear_1319" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" misc_feature complement(1407674..1408507) /locus_tag="Acear_1319" /note="ABC transporter, substrate-binding protein, aliphatic sulfonates family; Region: SsuA_fam; TIGR01728" /db_xref="CDD:130789" gene complement(1408758..1409399) /locus_tag="Acear_1320" /db_xref="GeneID:9513363" CDS complement(1408758..1409399) /locus_tag="Acear_1320" /note="KEGG: aac:Aaci_0657 hypothetical protein; SPTR: C1PVU2 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827898.1" /db_xref="GI:302392078" /db_xref="GeneID:9513363" /translation="MDDITMLAEKYLENYSVNDVINQEAAFLFILESPHTQEMRNGYP VAGSSGVEMTKFIYNTDKKDAFGKLVSQTKKYSDEYENLERFSILNVSSAPMQREGLK DYDLDEEEERIVRILEKLRVNYKSRNHRNQEWNQVKEVILSDFKQRLVSGLEVMERLT YLVPCGKLAVNYLQLIQNSEKIINQKEVIWNIPHPSFNQWSHYESMDQLKEKL" gene complement(1409411..1410514) /locus_tag="Acear_1321" /db_xref="GeneID:9513364" CDS complement(1409411..1410514) /locus_tag="Acear_1321" /note="COGs: COG2006 conserved hypothetical protein; InterPro IPR007160; KEGG: csc:Csac_1323 hypothetical protein; PFAM: protein of unknown function DUF362; SPTR: C0GDD7 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827899.1" /db_xref="GI:302392079" /db_xref="GeneID:9513364" /translation="MNRIYNLYGSKPKEMVYRILEEMDLDLDSDLTVGLKPNLILDKK SSSGATTDPELAAGVVEYLQQQGIDDILILEGSWVGAETERAFEVCGYNELVRKYDLS LYDLKEDQTQNCRSGRFEIKVCQKPLAVDYLINLPVLKAHCQTKITCALKNLKGCLPD SEKRRFHRLGLHQPIAHLNQILSSDLVLVDGIIGDLTFEEGGNPVHMNRIIAGKDSVL IDAYVARLLGFDAYEVDYIGIAEQLGVGSAELNKAEVIELNQPVDSFQTLDSIAQRGE KISRITDFVTTDQACSACLGSLVHALTRIDDKYGLPADFSISVGQGLEDKEIEGIGVG KCARRADKSIFGCPPDAKSIVDGLVEIWELTDE" misc_feature complement(1409735..1410421) /locus_tag="Acear_1321" /note="Uncharacterized conserved protein [Function unknown]; Region: COG2006" /db_xref="CDD:32189" misc_feature complement(1409834..1410421) /locus_tag="Acear_1321" /note="Domain of unknown function (DUF362); Region: DUF362; pfam04015" /db_xref="CDD:190830" gene complement(1410544..1411218) /locus_tag="Acear_1322" /db_xref="GeneID:9513365" CDS complement(1410544..1411218) /locus_tag="Acear_1322" /EC_number="2.1.1.77" /note="COGs: COG2518 protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: pth:PTH_2678 protein-L-isoaspartate carboxylmethyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: A5CYQ6 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase" /codon_start=1 /transl_table=11 /product="protein-L-isoaspartate O-methyltransferase" /protein_id="YP_003827900.1" /db_xref="GI:302392080" /db_xref="GeneID:9513365" /translation="MLFQDNERYQAMKRERMVKEQLQPKGIRHQATVESMLTVPRHKF VSERFQDMAYQDTALPIDKEQTISQPYIVGLMTEALQPSSGDKVLEIGTGSGYAAAVL AEIVDEVYTVERHQDLAQQAEDRFELLGYENIRLRVGDGTKGWVEYAPYDGITIAAGA PVVPESLADQLVTGGRLVIPVGRKEGVQELMLLKKKADGKLARSSLGQVRFVPLVGEE GWNKGR" misc_feature complement(1410676..1410960) /locus_tag="Acear_1322" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(1410751..1410753,1410796..1410804, 1410877..1410882,1410928..1410948)) /locus_tag="Acear_1322" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(1411297..1413357) /locus_tag="Acear_1323" /db_xref="GeneID:9513366" CDS complement(1411297..1413357) /locus_tag="Acear_1323" /note="COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR008928:IPR012336:IPR004879:IPR012335; KEGG: cth:Cthe_0291 hypothetical protein; PFAM: protein of unknown function DUF255; SPTR: A3DC51 Putative uncharacterized protein; PFAM: protein of unknown function, DUF255; glycosyl hydrolase family 76" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827901.1" /db_xref="GI:302392081" /db_xref="GeneID:9513366" /translation="MTTEQKGDPNRLIEEQSPYLLQHAYNPVDWYSWSDEAFKKAKTE DKPVFLSIGYSTCHWCHVMERESFEDEEVAEILNRSFVAIKVDREERPDIDNIYMTVC QTLTGRGGWPLTVIMTPEKKPFFAGTYFPKEAGRGQPGLMDILIRVEQAWKKKRQPLL ETSEEILSALERVNDTDKNDSASMEEMSGLAKEAFISFVANFDEDYGGFGTAPKFPTP HNLMFLLRYWKSTGEEKALEMVETTLDNMYRGGMYDHLGYGFARYSTDEKWLVPHFEK MLYDNALLAVTYLEAYQITDKEDYADIAREIFTYVLRDLTSPEGGFYSAEDADSEREE GKFYVWTPNEIKKILGNKQGEEFCQVYNITDEGNFEGKSIPNLIGTELDKSEVDKKFA AERKELFKAREKRVHPHKDDKILTSWNGLMIAALAIGARVLNDERYQQAAKEAAEFIW QNLRRDGNGRLLARYRNGEADYYGYVDDYAFFIWGLIELYETTFETEYLEKAAELNND LIEYFWDKEQGGLYFYGYDSEELLTRPKEIYDGAIPSGNSVATLNLLRLAKLIGDTEL EEKARQQFEYFGSRITNKPIASSYFLLSWLFAQNGGREIVIAGNREETVTEEMVQVLH QEFLPFTVSLLNTTQERKKLSELVPFAADQMKVDKRPTAYICENFACQKPVIDIEQFK ERLQ" misc_feature complement(1411300..1413342) /locus_tag="Acear_1323" /note="Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]; Region: COG1331" /db_xref="CDD:31522" misc_feature complement(1412896..1413267) /locus_tag="Acear_1323" /note="TRX domain, SSP411 protein family; members of this family are highly conserved proteins present in eukaryotes, bacteria and archaea, about 600-800 amino acids in length, which contain a TRX domain with a redox active CXXC motif. The human/rat protein...; Region: SSP411; cd02955" /db_xref="CDD:48504" misc_feature complement(order(1413178..1413180,1413187..1413189)) /locus_tag="Acear_1323" /note="catalytic residues [active]" /db_xref="CDD:48504" gene complement(1413461..1413718) /locus_tag="Acear_1324" /db_xref="GeneID:9513367" CDS complement(1413461..1413718) /locus_tag="Acear_1324" /note="InterPro IPR012452; KEGG: hor:Hore_17260 protein of unknown function (DUF1657); PFAM: protein of unknown function DUF1657; SPTR: B8CYV6 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1657)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827902.1" /db_xref="GI:302392082" /db_xref="GeneID:9513367" /translation="MTVGEDLHQTLTSLESIRTNYEQFAQSTQDQQAQQMFQQGAQQL DSMIDDLKNRVDYAEQEEPQYKVEQQMTGQQQGQQQGQQRQ" gene 1413911..1415215 /locus_tag="Acear_1325" /db_xref="GeneID:9513368" CDS 1413911..1415215 /locus_tag="Acear_1325" /note="COGs: COG2607 ATPase (AAA+ superfamily); InterPro IPR008533; KEGG: hor:Hore_15640 predicted ATPase (AAA+ superfamily); PFAM: protein of unknown function DUF815; SPTR: B8CYE4 Predicted ATPase (AAA+ superfamily); PFAM: protein of unknown function (DUF815)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827903.1" /db_xref="GI:302392083" /db_xref="GeneID:9513368" /translation="MYLSAAKNCCLKLNQLLIYRNLLDNNLIKKVKDLVLNLNNQPTK LTKLQTDYYQLYHELIKTGEKNELQGNLWQQYLLKAITTDKNTFSLTSERLGKDLGTS LYQAAVHDLKILKKFYKLNLAEIENKLNIQPIEFIHNFNPSTANNSLFTDNLTNLNKA FSQTESPKKLTDLLIDYYYSTGTGKLNRYAAFQWNNQQQQPIGIKNPDSVTFKELIGY QSQQQRLIENTEAFLNNNQANNVLLFGASGTGKSSSIKALINRYANEGLRLIEITKNQ LTELPKILHFLKQRGLYFIIFMDDLSFEDFETEYKYLKAIMEGGIERKPDNTLFYATS NRRNLIKEKWNDRSQQSSEVHPKDTKQEKLSLVERFGITITYEAPDQRDYLKIVKKLA EKNNINLSQEELEKKAKRWAIRHNGRSGRTAQQFITHLLGKE" misc_feature 1414466..1415209 /locus_tag="Acear_1325" /note="Predicted ATPase (AAA+ superfamily) [General function prediction only]; Region: COG2607" /db_xref="CDD:32599" misc_feature 1414574..1414936 /locus_tag="Acear_1325" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature 1414643..1414666 /locus_tag="Acear_1325" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(1414646..1414669,1414805..1414807,1414913..1414915) /locus_tag="Acear_1325" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 1414793..1414810 /locus_tag="Acear_1325" /note="Walker B motif; other site" /db_xref="CDD:99707" gene complement(1415216..1416010) /locus_tag="Acear_1326" /db_xref="GeneID:9513369" CDS complement(1415216..1416010) /locus_tag="Acear_1326" /note="COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: kol:Kole_1007 protein of unknown function DUF218; PFAM: protein of unknown function DUF218; SPTR: C5CHG0 Putative uncharacterized protein; PFAM: DUF218 domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827904.1" /db_xref="GI:302392084" /db_xref="GeneID:9513369" /translation="MVLFLVKLLSKLILPPGLFIILLIILFILLQTSQNKYSYRKNKR KYLYGCLILLLILIYLFSSYPGEFLLTKPLESQFDPLLISNRESKVGNSTAIVLLGSG VRRGTSRGVEIGEITLARLYRTWQIHKETGLDLVVSGGVVPGADNTSGAEVMKEVLLD LGVKEDKIILEKKAKNTWQNAVNTALLLEEREYEQIILVTSALHMKRAVYSFERNCNQ RLIPAPANYTFNTDVSLLDYLPNRESLDNSLAALHEWIGLVWYSFK" misc_feature complement(1415237..1415665) /locus_tag="Acear_1326" /note="YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been...; Region: YdcF-like; cd06259" /db_xref="CDD:99750" misc_feature complement(order(1415249..1415251,1415390..1415392, 1415399..1415401,1415411..1415413,1415471..1415473, 1415480..1415482)) /locus_tag="Acear_1326" /note="putative active site [active]" /db_xref="CDD:99750" gene complement(1416216..1416767) /locus_tag="Acear_1327" /db_xref="GeneID:9513370" CDS complement(1416216..1416767) /locus_tag="Acear_1327" /note="COGs: COG0622 phosphoesterase; InterPro IPR000979:IPR004843; KEGG: hor:Hore_08250 phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; SPTR: B8CWB3 phosphodiesterase, MJ0936 family; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family" /codon_start=1 /transl_table=11 /product="phosphodiesterase, MJ0936 family" /protein_id="YP_003827905.1" /db_xref="GI:302392085" /db_xref="GeneID:9513370" /translation="MKLGVVSDTHGSLSAWKETVKYLEDTDMILHAGDLLYHGARNPL PSGYDTEGLVKELNGFCGNLLAVKGNVDALVDDWVLPYPLSDYSVVIDNGRKIVIYHG YQHESKAERVEFAEQFGADILIYGHTHKPLLERIKGVILLNPGSAALPKQDPSQPTIA VIENTKIKIITLNDKEVIEELAL" misc_feature complement(1416375..1416767) /locus_tag="Acear_1327" /note="Calcineurin-like phosphoesterase; Region: Metallophos; pfam00149" /db_xref="CDD:189420" misc_feature complement(1416252..1416764) /locus_tag="Acear_1327" /note="Escherichia coli YfcE and related proteins, metallophosphatase domain; Region: MPP_YfcE; cd00841" /db_xref="CDD:163617" misc_feature complement(order(1416381..1416383,1416387..1416389, 1416465..1416467,1416555..1416560,1416666..1416668, 1416738..1416740,1416744..1416746)) /locus_tag="Acear_1327" /note="active site" /db_xref="CDD:163617" misc_feature complement(order(1416381..1416383,1416387..1416389, 1416465..1416467,1416558..1416560,1416666..1416668, 1416738..1416740,1416744..1416746)) /locus_tag="Acear_1327" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163617" misc_feature complement(order(1416459..1416461,1416480..1416512, 1416525..1416527,1416552..1416566,1416573..1416575, 1416684..1416689)) /locus_tag="Acear_1327" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:163617" gene complement(1416799..1417368) /locus_tag="Acear_1328" /db_xref="GeneID:9513371" CDS complement(1416799..1417368) /locus_tag="Acear_1328" /note="KEGG: bay:RBAM_010250 YhaG; SPTR: A7Z313 YhaG" /codon_start=1 /transl_table=11 /product="YhaG" /protein_id="YP_003827906.1" /db_xref="GI:302392086" /db_xref="GeneID:9513371" /translation="MKMRRFVEAALLLAIGFILRNIMPPLMLGMKPDLSLVMLFVVIM LYRDLKLTLVSGAVAGIISAFTTAFPGGQLANVVEKPLTSLSVLAILYLVSKMKISNK LEAGIIGLFGTLISGTLFLLITLAFVGLPGSFKALFLSVVLPTALMNVAFLYVLYPII KRIKGLTPSTKQELNEASKKNSLIRLFFY" gene complement(1417447..1418325) /locus_tag="Acear_1329" /db_xref="GeneID:9513372" CDS complement(1417447..1418325) /locus_tag="Acear_1329" /note="COGs: COG0583 transcriptional regulator; InterPro IPR000909:IPR000847:IPR005119:IPR011991; KEGG: drm:Dred_2282 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: A4J6T9 transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_003827907.1" /db_xref="GI:302392087" /db_xref="GeneID:9513372" /translation="MKLKTLKMLVKLIEMGSFSAVADKLDLTQPAVSMQIKSLEKRFD TDLVVRQDGGIKLTPTGKIIYRKAKRILDVWEEAKLEIEQVKGETFDQLIIGASTIPS EYLLPDLLAEFYKKFPQVEVLMEVGDSTEIINNLEDREVDIIIVGSKPTQNQFEVVSV IEDRLVLILPLEHRLINSSHVSLADLIKEQILIREQGSGTRKAMLAGLKEAGIDKAEL NLGLQLGSTEAVISAVEAGLGVSFVSELAASKAVDNRRVEKVKVNDMLISRKLYLAYH QERKNEALIKEFRKIF" misc_feature complement(1418140..1418286) /locus_tag="Acear_1329" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(1417462..1418280) /locus_tag="Acear_1329" /note="LysR transcriptional regulator; Provisional; Region: rbcR; CHL00180" /db_xref="CDD:177082" misc_feature complement(1417453..1418052) /locus_tag="Acear_1329" /note="C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold; Region: PBP2_CysL_like; cd08420" /db_xref="CDD:176112" misc_feature complement(order(1417618..1417623,1417627..1417632, 1417648..1417665,1417948..1417968,1417972..1417974, 1417984..1417986,1417993..1417998,1418002..1418007)) /locus_tag="Acear_1329" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176112" gene complement(1418358..1418828) /locus_tag="Acear_1330" /db_xref="GeneID:9513373" CDS complement(1418358..1418828) /locus_tag="Acear_1330" /note="COGs: COG4087 Soluble P-type ATPase; InterPro IPR005834; KEGG: dae:Dtox_2830 HAD family hydrolase; PFAM: haloacid dehalogenase; SPTR: C1T7S9 Soluble P-type ATPase; PFAM: haloacid dehalogenase-like hydrolase" /codon_start=1 /transl_table=11 /product="haloacid dehalogenase" /protein_id="YP_003827908.1" /db_xref="GI:302392088" /db_xref="GeneID:9513373" /translation="MLKCQIPNFKSLEVDKLVFDYNGTLACDGQPIESVKEKLNQLAE KFEVYILTADTFGTVENEFKDIEAEIIIIDSNDGSKAKQKFIRQLGSQTVIAVGNGSN DRLMLDEAGLGILVIGSEGASTRSLLESDLLINNINDVLDTILNPQRLVASLRE" misc_feature complement(1418379..1418828) /locus_tag="Acear_1330" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" gene complement(1418908..1419270) /locus_tag="Acear_1331" /db_xref="GeneID:9513374" CDS complement(1418908..1419270) /locus_tag="Acear_1331" /note="COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR011006:IPR001789; KEGG: hor:Hore_10620 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8CWZ8 Response regulator receiver protein; PFAM: Response regulator receiver domain" /codon_start=1 /transl_table=11 /product="response regulator receiver protein" /protein_id="YP_003827909.1" /db_xref="GI:302392089" /db_xref="GeneID:9513374" /translation="MAKGILIVDDAQFMRTMLSQLIEENGYEVLGEAENGQEAVEMYK EVNPDLVTMDITMPDMDGIEATEAILEIDPDAKIVMCSAMGQKPMVVDALEAGAKDFI VKPIQPEKVKDTLKSIFV" misc_feature complement(1418923..1419258) /locus_tag="Acear_1331" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature complement(1418914..1419255) /locus_tag="Acear_1331" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(1418956..1418961,1418968..1418970, 1419025..1419027,1419085..1419087,1419109..1419111, 1419241..1419246)) /locus_tag="Acear_1331" /note="active site" /db_xref="CDD:29071" misc_feature complement(1419109..1419111) /locus_tag="Acear_1331" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(1419085..1419093,1419097..1419102)) /locus_tag="Acear_1331" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(1418953..1418961) /locus_tag="Acear_1331" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" gene complement(1419380..1419457) /locus_tag="Acear_R0073" /db_xref="GeneID:9513375" tRNA complement(1419380..1419457) /locus_tag="Acear_R0073" /product="tRNA-Pro" /db_xref="GeneID:9513375" gene complement(1419488..1419564) /locus_tag="Acear_R0074" /db_xref="GeneID:9513376" tRNA complement(1419488..1419564) /locus_tag="Acear_R0074" /product="tRNA-Gly" /db_xref="GeneID:9513376" gene complement(1419621..1419697) /locus_tag="Acear_R0075" /db_xref="GeneID:9513377" tRNA complement(1419621..1419697) /locus_tag="Acear_R0075" /product="tRNA-Met" /db_xref="GeneID:9513377" gene complement(1419715..1419790) /locus_tag="Acear_R0076" /db_xref="GeneID:9513378" tRNA complement(1419715..1419790) /locus_tag="Acear_R0076" /product="tRNA-Lys" /db_xref="GeneID:9513378" gene complement(1419799..1419874) /locus_tag="Acear_R0077" /db_xref="GeneID:9513379" tRNA complement(1419799..1419874) /locus_tag="Acear_R0077" /product="tRNA-Thr" /db_xref="GeneID:9513379" gene complement(1419878..1419955) /locus_tag="Acear_R0078" /db_xref="GeneID:9513380" tRNA complement(1419878..1419955) /locus_tag="Acear_R0078" /product="tRNA-Asp" /db_xref="GeneID:9513380" gene complement(1419961..1420036) /locus_tag="Acear_R0079" /db_xref="GeneID:9513381" tRNA complement(1419961..1420036) /locus_tag="Acear_R0079" /product="tRNA-Val" /db_xref="GeneID:9513381" gene complement(1420169..1420244) /locus_tag="Acear_R0080" /db_xref="GeneID:9513382" tRNA complement(1420169..1420244) /locus_tag="Acear_R0080" /product="tRNA-Glu" /db_xref="GeneID:9513382" gene complement(1420253..1420326) /locus_tag="Acear_R0081" /db_xref="GeneID:9513383" tRNA complement(1420253..1420326) /locus_tag="Acear_R0081" /product="tRNA-Gln" /db_xref="GeneID:9513383" gene complement(1420353..1420469) /locus_tag="Acear_R0082" /db_xref="GeneID:9513384" rRNA complement(1420353..1420469) /locus_tag="Acear_R0082" /product="5S ribosomal RNA" /db_xref="GeneID:9513384" gene complement(1420581..1423531) /locus_tag="Acear_R0083" /db_xref="GeneID:9513385" rRNA complement(1420581..1423531) /locus_tag="Acear_R0083" /product="23S ribosomal RNA" /db_xref="GeneID:9513385" gene complement(1423650..1425174) /locus_tag="Acear_R0085" /db_xref="GeneID:9513386" rRNA complement(1423650..1425174) /locus_tag="Acear_R0085" /product="16S ribosomal RNA" /db_xref="GeneID:9513386" gene complement(1425630..1426274) /locus_tag="Acear_1332" /db_xref="GeneID:9513387" CDS complement(1425630..1426274) /locus_tag="Acear_1332" /note="COGs: COG1573 uracil-DNA glycosylase; InterPro IPR005122:IPR005273; KEGG: hor:Hore_11480 uracil-DNA glycosylase; PFAM: uracil-DNA glycosylase superfamily; SPTR: B8CX81 uracil-DNA glycosylase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4" /codon_start=1 /transl_table=11 /product="phage SPO1 DNA polymerase-related protein" /protein_id="YP_003827910.1" /db_xref="GI:302392090" /db_xref="GeneID:9513387" /translation="MLFHDTKDQLGLFTEQDQEQQRFNNLDEIKEVAVECERCELHKE CIQTVFGTGNSDTGLMFVGEGPGRQEDEQGEPFVGKAGQLFNKILKAAEIKRKDVYIS NIVKCRPPGNRNPKFSEMKSCLWFLAQEIKLIQPMIIVPLGSIAVKGLLDPDGKITEL RGNWVEREGYYLLPTFHPAALLRNEQWKKPTWHDFLKIKKGYQRYLELKEEGKL" misc_feature complement(1425678..1426169) /locus_tag="Acear_1332" /note="Uracil DNA glycosylase superfamily; Region: UDG; cl00483" /db_xref="CDD:193838" gene complement(1426394..1426897) /locus_tag="Acear_1333" /db_xref="GeneID:9513388" CDS complement(1426394..1426897) /locus_tag="Acear_1333" /note="KEGG: pml:ATP_00056 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827911.1" /db_xref="GI:302392091" /db_xref="GeneID:9513388" /translation="MFLMKDCRISECYKKNLLITLGKLAINNYPSIILEYNHQLSGEL KNLMTTVINDLQICRQLKTRISKLQTELNSSSYDNKRNNNRIQAYKDSLELKKKRLKH LRTDNYEQLAKIGEEFFKNRLLNHDRKFSNVYSQLEDELFQGGCIKDYKNTYINKYIN KVVNFIF" gene 1426994..1428115 /locus_tag="Acear_1334" /db_xref="GeneID:9513389" CDS 1426994..1428115 /locus_tag="Acear_1334" /note="KEGG: conserved hypothetical protein; SPTR: C5D868 Putative uncharacterized protein; PFAM: Flagellar hook-length control protein FliK" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827912.1" /db_xref="GI:302392092" /db_xref="GeneID:9513389" /translation="MKLFNNWPSKTNPESINKIEEILKKSPSKNISEANSDHLQQMTS KKVDNILTELGLLHNEANERIIKALLKYQLSLNKEEIINIKQLLNNHQTDSTEALKAI IFFKKTNLKLNHSSIKLLIDFLTKKPEIAADLKELIKSSPDKIANKLTEFILQPNQED RYFTAEEIKKQIMKLGLNFENNLLTKEAKQLNSLKRFLFDLKNNNSQTANKIIDNVIY NLTNQKLIMHQNERSGTNFLYLQLPLQFPNQEFITAHLNIFHQQKKSKPEERDNNRFC LALNLETKKLGLINIKLDFYNEQLNIYINTSSDKTLKLIKSQIQNLKTALTSLGYDIK NVTLAAIDTEDIQKDIESEVLQTNPFNFDNQLHNINFTI" misc_feature 1427804..1428004 /locus_tag="Acear_1334" /note="Flagellar hook-length control protein FliK; Region: Flg_hook; cl14669" /db_xref="CDD:196811" gene 1428128..1428418 /locus_tag="Acear_1335" /db_xref="GeneID:9513390" CDS 1428128..1428418 /locus_tag="Acear_1335" /note="COGs: COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; InterPro IPR006135; KEGG: hor:Hore_19930 FlhB domain protein; PFAM: type III secretion exporter; SPTR: B3KIA0 Cytoplasmic domain of flagellar protein FhlB-like protein; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein" /codon_start=1 /transl_table=11 /product="type III secretion exporter" /protein_id="YP_003827913.1" /db_xref="GI:302392093" /db_xref="GeneID:9513390" /translation="MTEEQDNKTQNKKAAALKYDPEQNNAPQVVAKGSNEVAKKIIAK AKENDIPIHQDDTLVKNLIQLDLEEEITGELYQIVAEVLSFIYQLNEMDNLD" misc_feature <1428167..1428397 /locus_tag="Acear_1335" /note="Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]; Region: FlhB; cl12017" /db_xref="CDD:196301" gene complement(1428381..1429055) /locus_tag="Acear_1336" /db_xref="GeneID:9513391" CDS complement(1428381..1429055) /locus_tag="Acear_1336" /note="InterPro IPR004223; KEGG: tpd:Teth39_0998 vitamin B12 dependent methionine synthase, activation region; PFAM: vitamin B12 dependent methionine synthase activation region; SPTR: B0K940 vitamin B12 dependent methionine synthase, activation region; PFAM: vitamin B12 dependent methionine synthase, activation domain" /codon_start=1 /transl_table=11 /product="vitamin B12 dependent methionine synthase activation region" /protein_id="YP_003827914.1" /db_xref="GI:302392094" /db_xref="GeneID:9513391" /translation="MKLEIDITEEEVLGMYGYQSLEEVTPQIKKTATEMIAEGEELAN LKSVTGDIEEIEINSKENLITINGDYKIESDYLTDKLFGANKATAGLVTTGFRLEKEI NNYFNKGDYLKATILDIVGNRLLDRITKKVWHTVRDNAVNQGLGVSGYYSPGEGDWDI ADQEFLFKLASGEKIGVNLTSKQMLSPQKSLLFIIGQGSNLEVNEYEPCQDCTNQDCP FHSADR" misc_feature complement(1428456..1428785) /locus_tag="Acear_1336" /note="Vitamin B12 dependent methionine synthase, activation domain; Region: Met_synt_B12; pfam02965" /db_xref="CDD:111813" gene complement(1429071..1429706) /locus_tag="Acear_1337" /db_xref="GeneID:9513392" CDS complement(1429071..1429706) /locus_tag="Acear_1337" /EC_number="4.2.99.18" /EC_number="3.2.2.-" /note="COGs: COG0177 EndoIII-related endonuclease; InterProIPR011257:IPR005759:IPR003265:IPR003651:IPR 004035; KEGG: hor:Hore_10790 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; SPTR: C6Q7V8 Endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III" /codon_start=1 /transl_table=11 /product="endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase" /protein_id="YP_003827915.1" /db_xref="GI:302392095" /db_xref="GeneID:9513392" /translation="MKTEEEINEILRILADEYPAPQTELNYKTPFQLLIATILSAQTT DRQVNKITTELFSKYNNPEDFLDLTPEELAEEIHGVGLYRNKSKYILKTCQKLVDEYD SQIPKTREELMELSGVGRKTANVVLSCAFEFDTIAVDTHVFRVTNRLGIANSDNVRRT EEELMKNLPQDKWSSAHHWFIFHGREICKARNPRCGECPVNHLCDYYKELD" misc_feature complement(1429080..1429703) /locus_tag="Acear_1337" /note="Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]; Region: Nth; COG0177" /db_xref="CDD:30526" misc_feature complement(1429155..1429616) /locus_tag="Acear_1337" /note="endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases; Region: ENDO3c; cd00056" /db_xref="CDD:28938" misc_feature complement(order(1429449..1429451,1429566..1429568, 1429575..1429583)) /locus_tag="Acear_1337" /note="minor groove reading motif; other site" /db_xref="CDD:28938" misc_feature complement(1429341..1429364) /locus_tag="Acear_1337" /note="helix-hairpin-helix signature motif; other site" /db_xref="CDD:28938" misc_feature complement(order(1429164..1429166,1429176..1429178, 1429332..1429334)) /locus_tag="Acear_1337" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:28938" misc_feature complement(1429290..1429292) /locus_tag="Acear_1337" /note="active site" /db_xref="CDD:28938" misc_feature complement(1429086..1429148) /locus_tag="Acear_1337" /note="FES domain; Region: FES; smart00525" /db_xref="CDD:128798" gene complement(1429736..1430509) /locus_tag="Acear_1338" /db_xref="GeneID:9513393" CDS complement(1429736..1430509) /locus_tag="Acear_1338" /note="COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR014940; KEGG: dth:DICTH_1469 hydrolases of the alpha/beta superfamily; PFAM: BAAT/Acyl-CoA thioester hydrolase; SPTR: B5YFH9 Hydrolases of the alpha/beta superfamily; PFAM: Prolyl oligopeptidase family" /codon_start=1 /transl_table=11 /product="BAAT/Acyl-CoA thioester hydrolase" /protein_id="YP_003827916.1" /db_xref="GI:302392096" /db_xref="GeneID:9513393" /translation="MEKPILFGESKSEMLGILHTPECKTDYPKPAVIFCHGFQGNKIG PHRIFVKMARKLAANGITVFRFDYRGSGDSSGDFIDTTISGQIEDTLTAIDYVRQLDR VNESQLGLLGLSLGGAVAALATARTDKIKALVLWSAVADIQKVFLAQRPENYDEEKVN KQGYIDLDGYRLGSRFIAEIGEIDPLAEVEGDNNSVFLVHGSEDEVVPIENTDKYYNT FSSEVCKKHIVVGSDHTYSKHEWESEVLDKTEEWLIENL" misc_feature complement(1429739..1430494) /locus_tag="Acear_1338" /note="Hydrolases of the alpha/beta superfamily [General function prediction only]; Region: COG1073" /db_xref="CDD:31271" misc_feature complement(<1430282..1430428) /locus_tag="Acear_1338" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" misc_feature complement(1429739..1430344) /locus_tag="Acear_1338" /note="Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These...; Region: Esterase_lipase; cl12031" /db_xref="CDD:197440" gene 1430754..1431995 /locus_tag="Acear_1339" /db_xref="GeneID:9513394" CDS 1430754..1431995 /locus_tag="Acear_1339" /note="COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701:IPR005829:IPR001958; KEGG: hor:Hore_21760 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: B8D0I6 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_003827917.1" /db_xref="GI:302392097" /db_xref="GeneID:9513394" /translation="MDKKYKIMLTTFSSVPFLMVLGNSMLIPEFPKLKAALDINQFQV GLFITLFSASAGISIPFLGYLSDRIGRKKIIIPSLFLYGLGGLIAGIASVILKENAYP VILGSRIIQGIGGAGTYPIVIALVGDIFTSNQRSEALGIIESANGLGKILSPILGAAI ALISWYALFFSYAILAIPIIIAMWLLTEEPDDNTKEQTLKEYLNNIKEIFKARGIPLV FSLLGGMVVLFLLFGLLSYLSDILETKYNIEGLIKGLVIAIPIFFMSTVSYFTGVFLK KEEKYFRHVLSLGLIVNAIILSSLSFVDNLYLYMGLISILGLGSGLVLPTVNTLITSS SSSEQRGGISSLYGSVRFIGVALGPPTFSLLHRISQKAMFFGAAGIGLISSILIFLFL DEDKIMSVDEDNQEDASDTED" misc_feature 1430778..>1431311 /locus_tag="Acear_1339" /note="The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of...; Region: MFS; cd06174" /db_xref="CDD:119392" misc_feature 1430802..1431830 /locus_tag="Acear_1339" /note="Major Facilitator Superfamily; Region: MFS_1; pfam07690" /db_xref="CDD:191813" misc_feature order(1430820..1430822,1430829..1430837,1430841..1430846, 1430895..1430897,1430904..1430909,1430916..1430918, 1430928..1430933,1430937..1430942,1431096..1431101, 1431108..1431113,1431120..1431125,1431132..1431134, 1431168..1431173,1431180..1431185,1431201..1431203) /locus_tag="Acear_1339" /note="putative substrate translocation pore; other site" /db_xref="CDD:119392" gene complement(1431992..1432141) /locus_tag="Acear_1340" /db_xref="GeneID:9513395" CDS complement(1431992..1432141) /locus_tag="Acear_1340" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827918.1" /db_xref="GI:302392098" /db_xref="GeneID:9513395" /translation="MSIKVISSFIVIIGLLAWLVLNHPVEDEAQGKNNYGYFFKLKNR DREHD" gene complement(1432152..1432610) /locus_tag="Acear_1341" /db_xref="GeneID:9513396" CDS complement(1432152..1432610) /locus_tag="Acear_1341" /note="COGs: COG2707 membrane protein; InterPro IPR007382; KEGG: drm:Dred_1097 hypothetical protein; PFAM: protein of unknown function DUF441; SPTR: A4J3H9 Putative uncharacterized protein; PFAM: protein of unknown function (DUF441)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827919.1" /db_xref="GI:302392099" /db_xref="GeneID:9513396" /translation="MGKEYILILIVFSLGVLAKSDLLSLAAVILFILKALHLHSIFPI LEDKGLDLGLLFLILAVLTPLITDDNGLSELVTAFKSPVGILALLGGLLATKLNGMGL ELLETEPHLIVQMVLGSLIGIIFLDGIPVGPLMAGGLTALFFQLFRFFIS" misc_feature complement(1432179..1432595) /locus_tag="Acear_1341" /note="Protein of unknown function (DUF441); Region: DUF441; cl01041" /db_xref="CDD:194016" gene complement(1432637..1433350) /locus_tag="Acear_1342" /db_xref="GeneID:9513397" CDS complement(1432637..1433350) /locus_tag="Acear_1342" /EC_number="3.1.3.71" /note="COGs: COG2045 phosphosulfolactate phosphohydrolase; InterPro IPR005238; KEGG: cbe:Cbei_0040 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulfolactate phosphatase; PRIAM: 2-phosphosulfolactate phosphatase; SPTR: A6LPF0 Probable 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulpholactate phosphatase; TIGRFAM: 2-phosphosulfolactate phosphatase" /codon_start=1 /transl_table=11 /product="2-phosphosulfolactate phosphatase" /protein_id="YP_003827920.1" /db_xref="GI:302392100" /db_xref="GeneID:9513397" /translation="MKIELILTAEEIEEKKIKNRVVAAIDTFRATTTIVTALENGARE VIPVVSIPKAVEYQSQNINDDIITAGEREGQKVAELDLGNSPLSFTESIVKNKQVVLT TTNGTEMLANLNQAKKVVIAALINLGAVAKEVESADELILCCAGSQGRFSLEDFITAG GLIYRLKDKGIKLELSDLSLVAYQSYLINSNKLLATLSQSENGDRLISLGKQSDVNYA LQKDLYSITPIYCQGIIQS" misc_feature complement(1432646..1433290) /locus_tag="Acear_1342" /note="2-phosphosulpholactate phosphatase; Region: 2-ph_phosp; cl00895" /db_xref="CDD:186243" gene complement(1433437..1434276) /locus_tag="Acear_1343" /db_xref="GeneID:9513398" CDS complement(1433437..1434276) /locus_tag="Acear_1343" /EC_number="4.4.1.19" /note="COGs: COG1809 conserved hypothetical protein; InterPro IPR003830:IPR013785; KEGG: drm:Dred_1677 phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulfolactate synthase ComA; PRIAM: phosphosulfolactate synthase; SPTR: A4J551 phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulfolactate synthase (ComA)" /codon_start=1 /transl_table=11 /product="phosphosulfolactate synthase" /protein_id="YP_003827921.1" /db_xref="GI:302392101" /db_xref="GeneID:9513398" /translation="MTKEQSKNGWKLDIDFPLSGRKEKPRQTGLTMVLDKGLGLNQTE DLMEMAADYIDFHKLSFGTSALYHPEILEQKIDLITSYGVDIYPGGTFLEVAVTQGML DDYLTKAKELGFTAIEVSDGTIDLTARLRSSIIKEAVNRDFKVLTEIGKKDKNSKFEL SKMIKQLKQDIADGAYKVIVEARESGRNISIYDKEGNLDEFKMEQLLLGAENKEDIIW EAPLKKQQVKFINTLGPNVNLGNIAPTEILALESLRVGVRGDTFKTALLQQDDYEKVF SLE" misc_feature complement(1433497..1434231) /locus_tag="Acear_1343" /note="(2R)-phospho-3-sulfolactate synthase (ComA); Region: ComA; cl00782" /db_xref="CDD:193937" gene complement(1434313..1434585) /locus_tag="Acear_1344" /db_xref="GeneID:9513399" CDS complement(1434313..1434585) /locus_tag="Acear_1344" /note="InterPro IPR020390; KEGG: bcl:ABC2479 hypothetical protein; SPTR: C1PED3 Putative uncharacterized protein; PFAM: protein of unknown function (DUF2619)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827922.1" /db_xref="GI:302392102" /db_xref="GeneID:9513399" /translation="MIYIKNKILLSMALLRVISGIIEFSAALLMLKFNSVEKALQLNS ILALVGPTVLVLVTALGLVEIAEKISLLNFVVIASGVGLILLGIKL" misc_feature complement(1434334..1434540) /locus_tag="Acear_1344" /note="Protein of unknown function (DUF2619); Region: DUF2619; pfam10942" /db_xref="CDD:151389" gene complement(1434681..1435640) /locus_tag="Acear_1345" /db_xref="GeneID:9513400" CDS complement(1434681..1435640) /locus_tag="Acear_1345" /note="COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: similar to ENSANGP00000022032; PFAM: ADP-ribosylation/Crystallin J1; SPTR: A0B6F5 ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase" /codon_start=1 /transl_table=11 /product="ADP-ribosylation/Crystallin J1" /protein_id="YP_003827923.1" /db_xref="GI:302392103" /db_xref="GeneID:9513400" /translation="MKKRLLQDKFIGSLVGTFVGDALGMAVEGYTIEEIEKKYGQLDY MLEARLGAGTYTDDTEMMIGVAESLISASGFDGADMAEKFVTNCNLDRGYGAGTIEAL NNIKAGSSWQEAGENIFDGGSFGNGSAMRIAPVGVFYHTDYEELRIKAKKSSQITHAH PLGKTGAAIQALTVGYAVNQKPEADFSVTDYLDVLTEYIDFESVEYSQALSSIQDFLK NVPEPKVVRNKLGNDARAFNSVPTSIYSCLINTDNFKKAVTYAINLGGDTDTLGAMTG AIAGAYHGYNDIPSDWLDQLENRERGLDYVIELGKKLFCLKHK" misc_feature complement(1434765..1435607) /locus_tag="Acear_1345" /note="ADP-ribosylglycohydrolase; Region: ADP_ribosyl_GH; cl00614" /db_xref="CDD:193885" gene complement(1436117..1437169) /locus_tag="Acear_1346" /db_xref="GeneID:9513401" CDS complement(1436117..1437169) /locus_tag="Acear_1346" /note="COGs: COG2603 ATPase; InterPro IPR001763:IPR017582; KEGG: cpe:CPE2070 tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; SPTR: A1HSD7 Rhodanese domain protein; TIGRFAM: tRNA 2-selenouridine synthase; PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase" /codon_start=1 /transl_table=11 /product="tRNA 2-selenouridine synthase" /protein_id="YP_003827924.1" /db_xref="GI:302392104" /db_xref="GeneID:9513401" /translation="MELITYQETLAKDSLVYVDVRSPKEFAESTIPEAVNIPVFNNEE RDEIGTTYVQESPMKARMLGIDLLSPKLPRLVKEIKALTDEYSYVVLFCARGGLRSES IGVITELIGVKLYKLEGGYKSYRHFILDQLEDYELESDLLVIHGNTGVGKTELLYSLQ EKEVPIIDLEGLANHRGSAFGGIGLGKPTNQKHFDSLLWERLEELNGAELIAVEAESK RIGMSVLPEFFLQAMEEGIHILIESTLEARVNRIYKEYAVSYEEDPDAFIDRWLESLT AIKKHIIKKAGKDEYKRLVKLSKAGELKKVIRTLLTEYYDPLYEYSQRQHDSFALRTE SDDIPEITEEIIDFLG" misc_feature complement(1436192..1437169) /locus_tag="Acear_1346" /note="tRNA 2-selenouridine synthase; Provisional; Region: PRK11784" /db_xref="CDD:183313" misc_feature complement(1436786..1437118) /locus_tag="Acear_1346" /note="Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins...; Region: RHOD; cl00125" /db_xref="CDD:193666" misc_feature complement(1436891..1436893) /locus_tag="Acear_1346" /note="active site residue [active]" /db_xref="CDD:29073" gene complement(1437305..1438360) /locus_tag="Acear_1347" /db_xref="GeneID:9513402" CDS complement(1437305..1438360) /locus_tag="Acear_1347" /note="COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterProIPR008995:IPR011868:IPR003439:IPR005116:IPR 003593:IPR017871; KEGG: pmo:Pmob_0377 ABC transporter related; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; SPTR: A9BF55 ABC transporter related; TIGRFAM: molybdate ABC transporter ATPase; PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum ABC transporter, ATP-binding protein" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter ATPase" /protein_id="YP_003827925.1" /db_xref="GI:302392105" /db_xref="GeneID:9513402" /translation="MIKLENISKDLGDFKLKNIDLELKEEEYFTILGPTGTGKSILLE VIAGLQQPEEGDIWFEDELVSNLPPEDRQIGMVYQDYMLFPHLDVKENILFGLKLRKE SAAEKKQKLQQIVSLLGINDLLDRSVKTLSGGEKQRVALARALIISPKILLLDEPLSA LDPSTKNKIQQDLKRVHTELGTTTLHVTHDFNEALSLADRIAIMQEGEIVQVGSPQQV FKQPESNFIAEFVGSKNIFVGQVVHKDDRTVIKINEDIELEINTEKEGDISLIIRPED IIISHQFFNSSARNSYQGVVKEVKERLSIVEVKVDIGIEMIAYITYRSLEEMGIEPGK EVYLTFKATACHVIKNA" misc_feature complement(1437317..1438360) /locus_tag="Acear_1347" /note="ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]; Region: PotA; COG3842" /db_xref="CDD:33633" misc_feature complement(1437653..1438357) /locus_tag="Acear_1347" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(1438241..1438264) /locus_tag="Acear_1347" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature complement(order(1437794..1437796,1437893..1437898, 1438124..1438126,1438238..1438246,1438250..1438255)) /locus_tag="Acear_1347" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature complement(1438124..1438135) /locus_tag="Acear_1347" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature complement(1437941..1437970) /locus_tag="Acear_1347" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature complement(1437893..1437910) /locus_tag="Acear_1347" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature complement(1437875..1437886) /locus_tag="Acear_1347" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature complement(1437788..1437808) /locus_tag="Acear_1347" /note="H-loop/switch region; other site" /db_xref="CDD:72971" misc_feature complement(1437320..1437505) /locus_tag="Acear_1347" /note="TOBE domain; Region: TOBE_2; cl01440" /db_xref="CDD:163979" gene complement(1438353..1439141) /locus_tag="Acear_1348" /db_xref="GeneID:9513403" CDS complement(1438353..1439141) /locus_tag="Acear_1348" /note="COGs: COG0555 ABC-type sulfate transport system permease component; InterPro IPR000515; KEGG: pmo:Pmob_0378 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A9BF56 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_003827926.1" /db_xref="GI:302392106" /db_xref="GeneID:9513403" /translation="MNRSGFKLILSLFSILLLFFILAPLTKLLTGSSAELVLTTLQEQ KVYNSLLITFKASLVATVITLILGIPLAYLLARGDFPGKALVEGIINLPVIIPHTAAG IALLTVFGSQFFGGKFFSKLGIEFVSEFPGVVIGMMFVSLPFLINEAKEGFRSIDERL EKVSRTLGATPAQTFFKVALPLNLNHIISGSVMMWGRGLSEFGAVVILAYHPMTAPIL IYERFTSYGLKYSKPIAIVMVLVTLSIFVGLRLLHNRGGRGIND" misc_feature complement(1438413..1438994) /locus_tag="Acear_1348" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(1438413..1438418,1438425..1438430, 1438437..1438442,1438446..1438451,1438458..1438463, 1438491..1438496,1438521..1438526,1438533..1438544, 1438563..1438565,1438572..1438577,1438617..1438619, 1438668..1438670,1438677..1438682,1438692..1438694, 1438698..1438703,1438710..1438712,1438716..1438718, 1438722..1438727,1438824..1438826,1438830..1438835, 1438842..1438871,1438875..1438886,1438914..1438916, 1438929..1438934,1438941..1438946)) /locus_tag="Acear_1348" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(1438527..1438544,1438824..1438868)) /locus_tag="Acear_1348" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature complement(order(1438461..1438463,1438491..1438493, 1438500..1438502,1438524..1438526,1438740..1438742, 1438824..1438826)) /locus_tag="Acear_1348" /note="putative PBP binding loops; other site" /db_xref="CDD:119394" misc_feature complement(order(1438596..1438598,1438608..1438613, 1438629..1438667)) /locus_tag="Acear_1348" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene complement(1439146..1440117) /locus_tag="Acear_1349" /db_xref="GeneID:9513404" CDS complement(1439146..1440117) /locus_tag="Acear_1349" /note="COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR006059; KEGG: pmo:Pmob_0379 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: A9BF57 Uncharacterized solute-binding protein Pmob_0379; PFAM: Bacterial extracellular solute-binding protein" /codon_start=1 /transl_table=11 /product="tungstate/molybdate binding protein" /protein_id="YP_003827927.1" /db_xref="GI:302392107" /db_xref="GeneID:9513404" /translation="MLKKRLSIVLIMLVALMAVSQVGAAINPEEVKGEITVFHAGSLA IPFKQVEEAFEAKYPQADVVREAAGSRTTVRKVTDLGRKADVVGSADYTVIEKLMMPE FANWRANFATNEMAIMYTPHSKYADKINADNWYKILLKDDVSYAHSNPNADPCGYRSQ LVWKLAEKYYNEPGLYDELDVGCPAKNVRPKETDLIAMLESGEIDYLFIYRSVAKQHD MPFVILPEKISLKTNKYSDFYSTVSYDISGKAPGEKITKTGRPMVYGVTIPKNAPNKT GAVAFMKFLLSEEGQEIMRKNGQPPIAPAKVNNLDEVPTDLRLIKEE" misc_feature complement(1439164..1440114) /locus_tag="Acear_1349" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(1440315..1440653) /locus_tag="Acear_1350" /db_xref="GeneID:9513405" CDS complement(1440315..1440653) /locus_tag="Acear_1350" /note="COGs: COG2005 N-terminal domain of molybdenum-binding protein; InterPro IPR000847:IPR011991; KEGG: mta:Moth_0066 ModE family transcriptional regulator; PFAM: regulatory protein LysR; SPTR: Q2RMD4 transcriptional regulator, ModE family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain" /codon_start=1 /transl_table=11 /product="ModE family transcriptional regulator" /protein_id="YP_003827928.1" /db_xref="GI:302392108" /db_xref="GeneID:9513405" /translation="MEPKVKLWLEVDGEAVFGTGRLKLLKYIDSLGSINKAANKLNMS YRAAWGKIKASEERLGIKLIETQVGGAKGGGTQLTPKAKEMLIKYQRYESEVNKQAQK IYEDILADLF" misc_feature complement(<1440348..1440653) /locus_tag="Acear_1350" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene 1440849..1441052 /locus_tag="Acear_1351" /db_xref="GeneID:9513406" CDS 1440849..1441052 /locus_tag="Acear_1351" /note="InterPro IPR008995:IPR004606:IPR005116; KEGG: dae:Dtox_3442 TOBE domain protein; PFAM: TOBE domain protein; SPTR: C1T8I0 Molybdenum-pterin binding domain protein; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain" /codon_start=1 /transl_table=11 /product="TOBE domain protein" /protein_id="YP_003827929.1" /db_xref="GI:302392109" /db_xref="GeneID:9513406" /translation="MSLSARNRLTGSIKDIKSDDVSSEIILNIGGQEVCSTITTNSVE RLNLEVGDEVTAAIKASNVIIQK" misc_feature 1440849..1441043 /locus_tag="Acear_1351" /note="TOBE domain; Region: TOBE_2; cl01440" /db_xref="CDD:163979" gene complement(1441165..1441914) /locus_tag="Acear_1352" /db_xref="GeneID:9513407" CDS complement(1441165..1441914) /locus_tag="Acear_1352" /note="KEGG: sth:STH39 RNA polymerase delta subunit; SPTR: Q67TG9 RNA polymerase delta subunit; PFAM: DNA-directed RNA polymerase delta subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827930.1" /db_xref="GI:302392110" /db_xref="GeneID:9513407" /translation="MSEAYNLTRLMTISDMAYKILKDREGSMHYKELFKEISEVKKIE NPSSVQSCIYSEDKFIRMGDGYWGLTEWLLNGLSFVYSIKPLEYQRQTLNIDFDHELY FPYYIQHDEINIEFRNRKYRGIRKDKQTFALEEFYNKEQVYPKNKLIIKILDVNDFDY KIVDLKRKDEELELDGLNQRIADLAFEVLKEKRGIMSTTRILKHILIKILKTEGIEGE FNLGPLMSLSEILSSDERFNKRLSGMFALNI" misc_feature complement(1441696..1441872) /locus_tag="Acear_1352" /note="DNA-directed RNA polymerase delta subunit; Region: RNA_pol_delta; cl01319" /db_xref="CDD:194101" gene complement(1442034..1442552) /locus_tag="Acear_1353" /db_xref="GeneID:9513408" CDS complement(1442034..1442552) /locus_tag="Acear_1353" /note="COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR004570:IPR000462; KEGG: tex:Teth514_2221 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: B0K4L9 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase" /codon_start=1 /transl_table=11 /product="CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase" /protein_id="YP_003827931.1" /db_xref="GI:302392111" /db_xref="GeneID:9513408" /translation="MNIANRLTLSRILIIPVFLYIFFVQFKYHLLLAGVIFFLSGLTD LLDGYIARTYDQVSNLGRLLDPLADKLTMITVFIALAVNQLIPIWILLVVICREVIIL SGAVLVYLNGVDIINPSKVGKYATLFLYITAFSYIVKWEFFQYFVLLAIPLTIVSGID YCIKAYSTFING" misc_feature complement(1442049..1442552) /locus_tag="Acear_1353" /note="CDP-alcohol phosphatidyltransferase; Region: CDP-OH_P_transf; cl00453" /db_xref="CDD:193825" gene complement(1442582..1442863) /locus_tag="Acear_1354" /db_xref="GeneID:9513409" CDS complement(1442582..1442863) /locus_tag="Acear_1354" /note="COGs: COG1254 Acylphosphatase; InterPro IPR001792; KEGG: deh:cbdb_A998 acylphosphatase; PFAM: acylphosphatase; SPTR: Q3ZXY7 Acylphosphatase; PFAM: Acylphosphatase" /codon_start=1 /transl_table=11 /product="acylphosphatase" /protein_id="YP_003827932.1" /db_xref="GI:302392112" /db_xref="GeneID:9513409" /translation="MSTTSAIKAVVKGRVQGVGYRAFTHQKATKLGLRGYVRSSDGNE VEVIAEGEKESLEELVDLLETGPTRAEINEVKWEWIDATDDYIRFAIKY" misc_feature complement(1442585..1442854) /locus_tag="Acear_1354" /note="Acylphosphatase; Region: Acylphosphatase; cl00551" /db_xref="CDD:193864" gene complement(1443178..1444617) /locus_tag="Acear_1355" /db_xref="GeneID:9513410" CDS complement(1443178..1444617) /locus_tag="Acear_1355" /note="COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: hor:Hore_10610 cation transporter; PFAM: cation transporter; SPTR: B8CWZ7 Cation transporter; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family" /codon_start=1 /transl_table=11 /product="cation transporter" /protein_id="YP_003827933.1" /db_xref="GI:302392113" /db_xref="GeneID:9513410" /translation="MRLKIIFNILGKLLIFVGLAMLLPLAVALFYKEVDGLSFLVSMG LTISVGKIMQKFSYSQQEIRHREGFAIVTLGWILISLFGAIPFMLSGVFDNFVNAFFE SVSGFTTTGATVILSLESLSHSILFWRSLSHWLGGMGIIVMSIAILPELAGSMQLFKA EAPGPVNDRLRPRIKETAKTLWVIYILLTILQMILLFFNDMSFFDAVLHSFGTMSTGG FSSRTLSVKAYDSLIIEGIMVFFMFLAGTNFTLHYQALRGNIKALFNNKEFRFYLFLV TTAILLITVNLRLQVYKGWLQSIRYAAFQTLSIISTAGFATVDYDIWPPFARGILLVL MFIGGCAGSTAGGIKIIRIYALMKKGFQELYKLIHPRAVTSLKIGNRAVSEEVSTSIL GFFFLYIIVFVVAAITLTSFGIDLISSISAVAATLGNIGPGLGLIGPLNTYVPLPIVG KLLLSFCMLLGRLEIYTVLVFMLAGFWRR" misc_feature complement(1443181..1444617) /locus_tag="Acear_1355" /note="Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]; Region: TrkG; COG0168" /db_xref="CDD:30517" misc_feature complement(1443184..1444617) /locus_tag="Acear_1355" /note="Cation transport protein; Region: TrkH; cl10514" /db_xref="CDD:187005" gene complement(1444630..1446021) /locus_tag="Acear_1356" /db_xref="GeneID:9513411" CDS complement(1444630..1446021) /locus_tag="Acear_1356" /note="COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148:IPR006037:IPR006036; KEGG: drm:Dred_2911 potassium transporter peripheral membrane component; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: A1HP21 TrkA-N domain protein; PFAM: TrkA-N domain; TrkA-C domain" /codon_start=1 /transl_table=11 /product="TrkA-N domain protein" /protein_id="YP_003827934.1" /db_xref="GI:302392114" /db_xref="GeneID:9513411" /translation="MAVAKLKKLKNKLTSSTSKLAIIYGGNELGVQLAEQLTKLERDV VIIDEDPQQLKQIQEKIDVMTLAGSGVDIERLKQVGINRTELMLAVSDNDEKNVLTSI YANRLGVEQIITKVDDYDYLTDNNSLLNDELGIDLIVNPCRIVVDQITNLIRPTMKTG IESFISGKIKLSEMTVTHRSPLAFNRLSEIDLPTNSLVICILRRNRLFIPDGDHKIYP GDTVYILGKKGLRTRLGQFLNKSQRKKEKVVLAGGSNISYQLTKILNQKRTVLTLIEE NRTCCEELAEEISDILVLNGRPTNIDLLKEEGIDQADIFVAAGNEDEKNLLTGLVAKK LGAKKVITIVNSLEYSYFSEIVNVDTILTPQILVLEKMLDFLHQGQVDTETILDGQMH LLKTDVPKRIANKQVKVKDLNKSSDLIVGIVNREEKLIIPDGGLELKQNDQLLVFTLA AKSNIKQELFSSF" misc_feature complement(1444666..1445958) /locus_tag="Acear_1356" /note="potassium transporter peripheral membrane component; Reviewed; Region: trkA; PRK09496" /db_xref="CDD:181909" misc_feature complement(1445599..1445958) /locus_tag="Acear_1356" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(1445338..1445511) /locus_tag="Acear_1356" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature complement(1444930..1445280) /locus_tag="Acear_1356" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene complement(1446197..1447312) /locus_tag="Acear_1357" /db_xref="GeneID:9513412" CDS complement(1446197..1447312) /locus_tag="Acear_1357" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: cdf:CD1661 transposase-like protein B; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; SPTR: Q5KY50 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003827935.1" /db_xref="GI:302392115" /db_xref="GeneID:9513412" /translation="MIKRFVPTKKGYKTRIYPNQEQKELINKTIGSCRWVYNYFLEKA KINGYESKTKYIKQLPQLKNEHVWLKEVDSIALQQAVRDLDQAFQNFFDGKQNYPQFK SKKHSRLSYRTQYFKRSSGTESIEIQNNKIKLPKLSWIEFNKHQEVKGNILNVTVSKE IDKYYISINLKDVIVTEVNYNQGEIGIDLGIKDFAITSDSEKIENPRHLQKYQDKLVR LQKKLARKEEGSNNWQKVKQKIVKLHRKIKNVRKDFLHKLSTRLVKENQLIAIENLNI KGMLKNSKLAKHIQDVSWSKFVNMLEYKGKWYNCIVEKVNNFFPSSQTCSECGKKNPK VKDLSVRNWVCKCGATHDRDLNASLNILKQAKKQLAD" misc_feature complement(1446218..1447288) /locus_tag="Acear_1357" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature complement(1447178..1447288) /locus_tag="Acear_1357" /note="Helix-turn-helix domain; Region: HTH_OrfB_IS605; pfam12323" /db_xref="CDD:192986" misc_feature complement(1446476..1447111) /locus_tag="Acear_1357" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature complement(1446224..1446433) /locus_tag="Acear_1357" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 1447445..1447651 /locus_tag="Acear_1358" /db_xref="GeneID:9513413" CDS 1447445..1447651 /locus_tag="Acear_1358" /note="KEGG: cce:Ccel_2966 hypothetical protein; SPTR: B8I8S8 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827936.1" /db_xref="GI:302392116" /db_xref="GeneID:9513413" /translation="MLTIKQEIKSYLARTGWTMTDLIKALNEKYNRNDSVQNLSNKLT RGTIKYKEVKEIADIIGAEIIWEF" gene complement(1447735..1448169) /locus_tag="Acear_1359" /db_xref="GeneID:9513414" CDS complement(1447735..1448169) /locus_tag="Acear_1359" /note="InterPro IPR005031; KEGG: hmo:HM1_1942 streptomyces cyclase/dehydrase, PFAM: cyclase/dehydrase; SPTR: B0TFS0 Streptomyces cyclase/dehydrase, PFAM: polyketide cyclase / dehydrase and lipid transport" /codon_start=1 /transl_table=11 /product="cyclase/dehydrase" /protein_id="YP_003827937.1" /db_xref="GI:302392117" /db_xref="GeneID:9513414" /translation="MPDVENSILIDGEIGEVYEVAKDMESYPRFMENVVEVKVVKEGE NTTITSWVAEVDGKRLAWKERDIFDPENKHIFYELVEGDLKKFSGEWKFEEKNRGTQL RLTVDFEFGISMLSSVVNPILKKKVMSNSQAMLEAIKEEVEA" misc_feature complement(1447738..1448160) /locus_tag="Acear_1359" /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily; Region: SRPBCC; cl14643" /db_xref="CDD:196807" misc_feature complement(order(1447756..1447758,1447765..1447773, 1447780..1447785,1447789..1447803,1447846..1447848, 1447852..1447854,1447858..1447860,1447864..1447866, 1447882..1447884,1447888..1447890,1447894..1447899, 1447939..1447941,1447945..1447947,1447987..1447989, 1447993..1447995,1447999..1448001,1448026..1448028, 1448032..1448034,1448038..1448040,1448044..1448046, 1448062..1448064,1448104..1448109,1448113..1448121, 1448146..1448148,1448152..1448154,1448158..1448160)) /locus_tag="Acear_1359" /note="hydrophobic ligand binding site; other site" /db_xref="CDD:176854" gene complement(1448180..1449436) /locus_tag="Acear_1360" /db_xref="GeneID:9513415" CDS complement(1448180..1449436) /locus_tag="Acear_1360" /EC_number="2.6.1.11" /note="COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR015424:IPR005814:IPR015421:IPR010916; KEGG: tth:TTC0553 ornithine aminotransferase; PFAM: aminotransferase class-III; SPTR: A1HTU7 Acetylornithine and succinylornithine aminotransferases; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases" /codon_start=1 /transl_table=11 /product="acetylornithine aminotransferase apoenzyme" /protein_id="YP_003827938.1" /db_xref="GI:302392118" /db_xref="GeneID:9513415" /translation="MKSKEEIIELYEEHLNPGLARIFKFMGLNSIEVEAEGVKVKNSS GEEYLDCIGGYGSLNFGHRPSEIITALQQQLEKMPLSSKLLFNRQQAEFAAKLAEVTP GNLKYSFICNSGTEAVEGALKLARLYTGRSEIISTINSFHGKSMGALSATGKKEYKAP FQPLVPGFKHVPFGDIEALTEAVTSETAAVIVEPIQGEGGIVLPPKGYLTEVRRLCNE KEVVMIVDEIQTGLGRTGTNFAVEFEEVVPDIMTLAKSLGGGVMPLGALIAKPKLWEP LCEAPMLHTSTFGGNPLAAAAGKKALEILEQDELALRARQRGNSLLTELNKLQIEYPD LIKEVRGRGLMIGIELTTEGIGGMLISELTKRNLLAAYTLNSPQVIRVEPPLIITEKE VTKVVEVFSAAFKEVAAMNSQEKSIG" misc_feature complement(1448213..1449421) /locus_tag="Acear_1360" /note="putrescine--2-oxoglutarate aminotransferase; Provisional; Region: PRK11522" /db_xref="CDD:183175" misc_feature complement(1448273..1449406) /locus_tag="Acear_1360" /note="Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase...; Region: OAT_like; cd00610" /db_xref="CDD:99735" misc_feature complement(order(1448672..1448674,1448750..1448755, 1448759..1448761,1448858..1448860,1449005..1449007, 1449011..1449016,1449092..1449100)) /locus_tag="Acear_1360" /note="inhibitor-cofactor binding pocket; inhibition site" /db_xref="CDD:99735" misc_feature complement(order(1448672..1448674,1448750..1448752, 1448759..1448761,1448858..1448860,1449011..1449016, 1449092..1449097)) /locus_tag="Acear_1360" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature complement(1448672..1448674) /locus_tag="Acear_1360" /note="catalytic residue [active]" /db_xref="CDD:99735" gene complement(1450064..1450495) /locus_tag="Acear_1361" /db_xref="GeneID:9513416" CDS complement(1450064..1450495) /locus_tag="Acear_1361" /note="COGs: COG3610 conserved hypothetical protein; KEGG: lsp:Bsph_0862 hypothetical protein; SPTR: A3I838 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1212)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827939.1" /db_xref="GI:302392119" /db_xref="GeneID:9513416" /translation="MVLDILAVFLATIAFGIIFKLPKRALFNSGLAGVLGWGGYNLAF EFTHNQIFASFLGVVVITIIAEISARLLKEPATLFIVSGIIPLVPGSQAYFTMLNLIE KDYQAGFATGVETFLIAGAISAGIIFVGVLARLQTDESNLQ" misc_feature complement(1450100..1450489) /locus_tag="Acear_1361" /note="Protein of unknown function (DUF1212); Region: DUF1212; cl01118" /db_xref="CDD:194040" gene complement(1450510..1451262) /locus_tag="Acear_1362" /db_xref="GeneID:9513417" CDS complement(1450510..1451262) /locus_tag="Acear_1362" /note="COGs: COG2966 conserved hypothetical protein; InterPro IPR010619; KEGG: amt:Amet_2364 hypothetical protein; PFAM: protein of unknown function DUF1212; SPTR: A1HRS2 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1212)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827940.1" /db_xref="GI:302392120" /db_xref="GeneID:9513417" /translation="MAQQNVLLLVSLVGEILLKNGAETYRVEETVRKIGAVYDFVKTE VFALPTGLFISLEDKDGQSWTRIKRIKHQTTDLQKVSMVNDLSRQITTGQIETNQALM EMKKISNHQDSYSAVISYLSAGVGSLTFSYLVYGLRLELIPAFIGALVLETWMRRNNI NNFVAEVVSGLIAATVGIVSNYFYPVLDHNLIILGIIIILVPGVSVTNAARDIIAGDS LSGVVRGMNALLTALAIALGVASILGIKIILI" misc_feature complement(1450654..1451208) /locus_tag="Acear_1362" /note="Protein of unknown function (DUF1212); Region: DUF1212; cl01118" /db_xref="CDD:194040" gene 1451381..1451554 /locus_tag="Acear_1363" /db_xref="GeneID:9513418" CDS 1451381..1451554 /locus_tag="Acear_1363" /note="KEGG: hor:Hore_11730 hypothetical protein; SPTR: B8CXA4 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827941.1" /db_xref="GI:302392121" /db_xref="GeneID:9513418" /translation="MVDKDINHDPEHEKGAPPPQSMPALFGWMTIDHQREKAKELIEI SQELTDIGDLDRN" gene complement(1451574..1452323) /locus_tag="Acear_1364" /db_xref="GeneID:9513419" CDS complement(1451574..1452323) /locus_tag="Acear_1364" /note="COGs: COG2323 membrane protein; InterPro IPR007353; KEGG: mta:Moth_0220 hypothetical protein; PFAM: protein of unknown function DUF421; SPTR: Q2RLY4 Putative uncharacterized protein; PFAM: protein of unknown function (DUF421)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827942.1" /db_xref="GI:302392122" /db_xref="GeneID:9513419" /translation="MSGAIIFEIIIQTFLAFFAILFYTRILGKQQIGELSFHDYVNGI TFGSIAATMTTDFNQRTWHYLLGLTLFAALTFLMQLIVVRSRKARKVIEGEPIVLIHN GKILEKNMKTARFNLQELTSHLRQKDIFDLKQVEYAILEPNGNISVMPKPEHKSVTVK DMGLSVSPEAVPTAVITDGKLLLPNLKQHGLSKTWIKEQLKAYGIEKIEEVFMAAYDP VKEELYIDLYEDNLGKNTVDMSEEYNTKDPE" misc_feature complement(1451631..1452308) /locus_tag="Acear_1364" /note="Protein of unknown function (DUF421); Region: DUF421; cl00990" /db_xref="CDD:193999" gene 1452389..1452481 /locus_tag="Acear_1365" /db_xref="GeneID:9513420" CDS 1452389..1452481 /locus_tag="Acear_1365" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827943.1" /db_xref="GI:302392123" /db_xref="GeneID:9513420" /translation="MSLTLQTVLTILFIVVGFVILYILSKKELI" gene 1452794..1453714 /locus_tag="Acear_1366" /db_xref="GeneID:9513421" CDS 1452794..1453714 /locus_tag="Acear_1366" /note="COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: swi:Swit_1926 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C3XCE2 ABC-type multidrug transport system; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003827944.1" /db_xref="GI:302392124" /db_xref="GeneID:9513421" /translation="MSAAIKIQDLNKSYGDLQALTDINLKIEKGEFFGLLGPNGAGKS TLIKILGGLADKDSGQVSILGTDIDKNHCQAKRSLGIVPQELIIDPYFNPKETLKLQS GYFGIQDNDEKINEILTAMDLHDKANAYARNLSGGMKRRLLIAKALIHDPDIIVLDEP TAGVDVELRNNLWNYIRQLNNEGKTIILTTHYLKEAEALCDRIAIMDQGHIVAVDTKE KLINSIDKKLVEIKLKEEINQLPKAFSNYKVEINEEVGKITFELSKKEIEDFIRQLYK SEIQIKDIDISSAKLEDVFLKLTNLGGKDN" misc_feature 1452794..1453693 /locus_tag="Acear_1366" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:31326" misc_feature 1452806..1453453 /locus_tag="Acear_1366" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature 1452902..1452925 /locus_tag="Acear_1366" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature order(1452911..1452916,1452920..1452928,1453043..1453045, 1453265..1453270,1453364..1453366) /locus_tag="Acear_1366" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature 1453034..1453045 /locus_tag="Acear_1366" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature 1453193..1453222 /locus_tag="Acear_1366" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature 1453253..1453270 /locus_tag="Acear_1366" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature 1453277..1453288 /locus_tag="Acear_1366" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature 1453352..1453372 /locus_tag="Acear_1366" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene 1453710..1454471 /locus_tag="Acear_1367" /db_xref="GeneID:9513422" CDS 1453710..1454471 /locus_tag="Acear_1367" /note="InterPro IPR000412:IPR013525:IPR013526; KEGG: mmb:Mmol_0306 ABC transporter; PFAM: ABC transporter; SPTR: B1G8F8 ABC transporter; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003827945.1" /db_xref="GI:302392125" /db_xref="GeneID:9513422" /translation="MNYISFYTLVKKEVMRFIKVSIQTIFAPLISTTLYLIIFSYSFK SKEVANYSVPYIKFIIPGLIIMGIIQNSFANTSSSLVISKYQGTIIELLLAPFSHIEL SLGLMIGGIARGLAVGIAIYLVSILFYGGTVAHPLLLLLAGTIVAGVFSLLGIVAGLW AEKFDHVSIFSNFFITPLTFLSGVFYSVESLPGIWSKISLFNPVVYMVDLVRYSFIGQ SDVNYLFSLTIISGAFVVLLTLVTYLFKIGYKIKD" misc_feature 1453710..1454465 /locus_tag="Acear_1367" /note="ABC-2 type transporter; Region: ABC2_membrane; cl11417" /db_xref="CDD:196223" gene complement(1454697..1455080) /locus_tag="Acear_1368" /db_xref="GeneID:9513423" CDS complement(1454697..1455080) /locus_tag="Acear_1368" /note="KEGG: nmr:Nmar_0571 hypothetical protein; SPTR: A6LSV2 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827946.1" /db_xref="GI:302392126" /db_xref="GeneID:9513423" /translation="MKKEFLTAINCMDGRVQEPVIQWLQEEYRKEYVDMITEPGPNLI LAEGQPKSNVESIKSRVEISVNKHGSDLVAVVGHYDCAGNPAGKEKQLEDIKSAVDKV KDWDLDAEVIGLWVDKEWKVERVEL" gene complement(1455406..1456884) /locus_tag="Acear_1369" /db_xref="GeneID:9513424" CDS complement(1455406..1456884) /locus_tag="Acear_1369" /note="COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445:IPR018253; KEGG: nth:Nther_0255 cation transporter; PFAM: cation transporter; SPTR: C3WAZ2 Trk-type K+ transport system; PFAM: Cation transport protein" /codon_start=1 /transl_table=11 /product="cation transporter" /protein_id="YP_003827947.1" /db_xref="GI:302392127" /db_xref="GeneID:9513424" /translation="MRYKEMIIQRYKLLLKYIGILTIGIGVILLLPLLVLPFYPQNIM YSTSFLIPSFLYMILGGVIWKLIQSENNFTLSLKEGGIIVLASWILAIIASALPFIIA GKLNFTQAVFEATSGWTTTGLSVVNEAKTPNIFLLWRSIMQFFGGAGLIVVMLSSILH PYGFGLYNAEGRSDQLLPHVKQSAKAIMLIYSGYTIGGIILYILAGMGVFDAVNHSIA ALSTGGFSTRQASIGYWNSISVEIVTWVLMLLGTTNFATHFALLKGKFKIFFKNGEVR LLGVLIAVFTPLISYFTLTELYNYLPDLLRRGIFETITAISTTGFSLDTFNNWNSFGM LSMILLMLIGGGTGSTAGGIKLYRIYLMFKSLIWQFEGYFLPQNAVRENYIWRGETKL YIKLEYIRETANYIYLYMGTYFIGVFIYLAYGYDLTNSMFEFASALGTVGLSIGITAA DAPTGILWLETVGMFLGRLEFLVIFFAVAKIIKDLKFNLENK" misc_feature complement(1455460..1456725) /locus_tag="Acear_1369" /note="Cation transport protein; Region: TrkH; cl10514" /db_xref="CDD:187005" misc_feature complement(1455481..1456593) /locus_tag="Acear_1369" /note="potassium uptake protein, TrkH family; Region: 2a38; TIGR00933" /db_xref="CDD:162118" gene complement(1456897..1457556) /locus_tag="Acear_1370" /db_xref="GeneID:9513425" CDS complement(1456897..1457556) /locus_tag="Acear_1370" /note="COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148:IPR006037:IPR006036; KEGG: nth:Nther_0254 TrkA-N domain protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: B2A4T1 TrkA-N domain protein; PFAM: TrkA-N domain; TrkA-C domain" /codon_start=1 /transl_table=11 /product="TrkA-N domain protein" /protein_id="YP_003827948.1" /db_xref="GI:302392128" /db_xref="GeneID:9513425" /translation="MRIIIVGGGKVVYHLTKNFTAKGYEVAIINKDKDYCKMLARETN SLAICGDGSKPEYLAQAEARKTDAVLALTGSDPDNLFICQLAQKEFGIPQTFSVVNNP DNEEIFKSLGVETIFNTTKLISLLIEQRVEISDVNNLLSIEEGRISISQVVLKSTSPV LGKTVRELDLPHDIVFGCVIREENVLIPHGDTKLLEGDKVLIITLPEKQGQAFSVLSG E" misc_feature complement(1456900..1457556) /locus_tag="Acear_1370" /note="K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]; Region: TrkA; COG0569" /db_xref="CDD:30915" misc_feature complement(1457203..1457550) /locus_tag="Acear_1370" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(1456936..1457112) /locus_tag="Acear_1370" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene complement(1457573..1457971) /locus_tag="Acear_1371" /db_xref="GeneID:9513426" CDS complement(1457573..1457971) /locus_tag="Acear_1371" /note="COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR016040:IPR003148:IPR006036; KEGG: tle:Tlet_0894 TrkA domain-containing protein; PFAM: TrkA-N domain protein; SPTR: Q1ELZ9 K+ transport systems, NAD-binding component; PFAM: TrkA-N domain" /codon_start=1 /transl_table=11 /product="TrkA-N domain protein" /protein_id="YP_003827949.1" /db_xref="GI:302392129" /db_xref="GeneID:9513426" /translation="MYILVIGCGRTGSSIANLLSKEGQNVVVVDKDSEAFDRLSAEFT GFTIVGDATEIEVLTEAKLDKTDAAVITTNDDNVNAMIAQIASELYDVPKVFVRVIDP SKEVIYEDTDIIEMSPTNLLVTEFKDKIIS" misc_feature complement(1457627..1457965) /locus_tag="Acear_1371" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene complement(1457974..1458681) /locus_tag="Acear_1372" /db_xref="GeneID:9513427" CDS complement(1457974..1458681) /locus_tag="Acear_1372" /note="COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR011006:IPR019734:IPR001789:IPR013026:IPR 013105; KEGG: nth:Nther_0252 response regulator receiver protein; PFAM: response regulator receiver; hypothetical protein; SMART: response regulator receiver; Tetratricopeptide repeat; SPTR: B2A4S9 Response regulator receiver protein; PFAM: Response regulator receiver domain; Tetratricopeptide repeat" /codon_start=1 /transl_table=11 /product="response regulator receiver protein" /protein_id="YP_003827950.1" /db_xref="GI:302392130" /db_xref="GeneID:9513427" /translation="MTQEKILIVDDEKNIRKTLKQCLQTDYEVVTAVNGEDGIDKFAE DDFAVILLDMKLPGIDGIKVLEEIKKEDNGANVIMITGFGSVKTAVKTMKLGAVDYLR KPFTPDEIRKIVQEVIDRDRIEIVEEELDSYEDYVQYAKSCINDRKFEKAREYLQKAV SLDTSKPEAFNLLGVIFEMQDKLKEAQKEYRAALALDPSYKPARDNLDRTTQFEYQKR DINLGEVDEEEDETEEA" misc_feature complement(1458337..1458666) /locus_tag="Acear_1372" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature complement(1458337..1458663) /locus_tag="Acear_1372" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(1458370..1458375,1458382..1458384, 1458439..1458441,1458499..1458501,1458523..1458525, 1458649..1458654)) /locus_tag="Acear_1372" /note="active site" /db_xref="CDD:29071" misc_feature complement(1458523..1458525) /locus_tag="Acear_1372" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(1458499..1458507,1458511..1458516)) /locus_tag="Acear_1372" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(1458367..1458375) /locus_tag="Acear_1372" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(<1458061..1458282) /locus_tag="Acear_1372" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(1458064..1458069,1458145..1458150, 1458157..1458162,1458166..1458171,1458256..1458261, 1458268..1458273,1458277..1458282)) /locus_tag="Acear_1372" /note="binding surface" /db_xref="CDD:29151" misc_feature complement(order(1458103..1458105,1458112..1458114, 1458124..1458126,1458160..1458162,1458205..1458207, 1458214..1458216,1458226..1458228,1458262..1458264)) /locus_tag="Acear_1372" /note="TPR motif; other site" /db_xref="CDD:29151" gene complement(1458712..1459071) /locus_tag="Acear_1373" /db_xref="GeneID:9513428" CDS complement(1458712..1459071) /locus_tag="Acear_1373" /note="COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789; KEGG: nth:Nther_0251 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B2A4S8 Response regulator receiver protein; PFAM: Response regulator receiver domain" /codon_start=1 /transl_table=11 /product="response regulator receiver protein" /protein_id="YP_003827951.1" /db_xref="GI:302392131" /db_xref="GeneID:9513428" /translation="MNKILVVEDNKNIITVLRICLQNAGYEVKTVSNGVKAVETAFEW KPDLILLDIKIPKMNGFLVCETLKDEEVTANTPIIMLSAKAEEENIKKAYNLGAEGYI TKPIEPKRLLAEIDKYL" misc_feature complement(1458724..1459062) /locus_tag="Acear_1373" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature complement(1458715..1459059) /locus_tag="Acear_1373" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(1458757..1458762,1458769..1458771, 1458826..1458828,1458892..1458894,1458916..1458918, 1459045..1459050)) /locus_tag="Acear_1373" /note="active site" /db_xref="CDD:29071" misc_feature complement(1458916..1458918) /locus_tag="Acear_1373" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(1458892..1458900,1458904..1458909)) /locus_tag="Acear_1373" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(1458754..1458762) /locus_tag="Acear_1373" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" gene complement(1459086..1460939) /locus_tag="Acear_1374" /db_xref="GeneID:9513429" CDS complement(1459086..1460939) /locus_tag="Acear_1374" /note="COGs: COG5002 Signal transduction histidine kinase; InterProIPR003594:IPR009082:IPR000014:IPR005467:IPR 000700:IPR003660:IPR013767:IPR003661:IPR004358; KEGG: nth:Nther_0250 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; SPTR: B2A4S7 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box" /codon_start=1 /transl_table=11 /product="multi-sensor signal transduction histidine kinase" /protein_id="YP_003827952.1" /db_xref="GI:302392132" /db_xref="GeneID:9513429" /translation="MAKNLNLRTKILVGYLITVMIIIGVASWAIYNFVSLNESINDIM VENYRSVIAAEGMMEALERQDSAELIFVFGQQKKALDIFKKNQMQFMKHLSRAEDNIT IDKEKKIIANLNQEYQNYLEMFSTLQRKADQSKLKEAQNFYLEEVMPQFEKIKTETRD LLLVNQNHMKTAQEKANDSAVKAVYSTAIFSVIATIFAILFGIYISNLIIKPVKELTA TVKEIAAGNLDHEIKMDTKDEIGQLAHEFNSMTERLKEFEEMNVGKVIEEKNKSEAIV KSISNPLLVTDEENKVQLMNPKAEELFDLNEDNIVETHFLESIDEDRIFDLITETLDS GEEQVGKNNEVITFKPDNNDSKGHYFRINTTPVSDREGNTNLVVTLLEDITHLKEVDQ MKSEFVSMVSHEFRTPLTSMNMGINMLLEENIGEINEEQKELLEVAKEDCEHLNNLVD DLLDLSKIESGEIDLEFDAVAVKKIFEASIQPFMTQAEEQGVDLITEETNGLEVYADF NKITWVITNLIGNALRYTGKGDKIKLLADKKGHKMHISVADTGEGIPKEYRHKIFKKF VRVGDDKDEETGTGLGLAISKEIIEAHGGRIWVESEVGEGSIFTFTLKLPK" misc_feature complement(1460400..1460930) /locus_tag="Acear_1374" /note="Four helix bundle sensory module for signal transduction; Region: 4HB_MCP_2; pfam12729" /db_xref="CDD:193205" misc_feature complement(<1460172..1460594) /locus_tag="Acear_1374" /note="Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms]; Region: NarQ; COG3850" /db_xref="CDD:33640" misc_feature complement(1460172..1460315) /locus_tag="Acear_1374" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cd06225" /db_xref="CDD:100122" misc_feature complement(order(1460178..1460183,1460190..1460195, 1460199..1460204,1460211..1460216,1460220..1460225, 1460271..1460273,1460277..1460282,1460289..1460294, 1460298..1460303,1460310..1460315)) /locus_tag="Acear_1374" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100122" misc_feature complement(1459101..1460147) /locus_tag="Acear_1374" /note="phosphate regulon sensor kinase PhoR; Region: phoR_proteo; TIGR02966" /db_xref="CDD:163090" misc_feature complement(<1459974..1460123) /locus_tag="Acear_1374" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature complement(1459557..1459763) /locus_tag="Acear_1374" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cl00080" /db_xref="CDD:153499" misc_feature complement(1459101..1459400) /locus_tag="Acear_1374" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(1459113..1459115,1459119..1459124, 1459137..1459139,1459143..1459145,1459191..1459202, 1459278..1459283,1459287..1459289,1459293..1459295, 1459299..1459301,1459368..1459370,1459377..1459379, 1459389..1459391)) /locus_tag="Acear_1374" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(1459377..1459379) /locus_tag="Acear_1374" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(1459194..1459196,1459200..1459202, 1459281..1459283,1459287..1459289)) /locus_tag="Acear_1374" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(1461304..1462116) /locus_tag="Acear_1375" /db_xref="GeneID:9513430" CDS complement(1461304..1462116) /locus_tag="Acear_1375" /note="COGs: COG2801 transposase and inactivated derivatives; InterPro IPR012337:IPR001584; KEGG: hor:Hore_00290 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: B8D037 Integrase catalytic region; PFAM: Integrase core domain" /codon_start=1 /transl_table=11 /product="Integrase catalytic region" /protein_id="YP_003827953.1" /db_xref="GI:302392133" /db_xref="GeneID:9513430" /translation="MCQVLEVSRSGYYKWLNRKPSQREKINKKLKLKIAEIYWQHNGT YGSPRIHRVLRKEGYTVNIKRVARLMRIMGLKAIQKRKFKRTTNSNHDLPLKENLLKR DFDIDKPDKVWVSDITYISTKKGWLYLAVVIDLYSRKVVGYSMSKRINTDLIMSATKM AISRRNPEAGLIFHSDRGSQYASHKVQNLFKQHSIRSSMSRKGDCWDNAVAESFFGTL KIELVYHKKYLTRNQARLDIFEYIAGYYNKVRLHSYLDYMSPKDYEKERKMA" misc_feature complement(1461322..1462104) /locus_tag="Acear_1375" /note="putative transposase OrfB; Reviewed; Region: PHA02517" /db_xref="CDD:177368" misc_feature complement(1461451..1461798) /locus_tag="Acear_1375" /note="Integrase core domain; Region: rve; cl01316" /db_xref="CDD:194099" gene complement(1462164..1462424) /locus_tag="Acear_1376" /db_xref="GeneID:9513431" CDS complement(1462164..1462424) /locus_tag="Acear_1376" /note="InterPro IPR002514; KEGG: hor:Hore_13730 transposase IS3/IS911 family protein; PFAM: transposase IS3/IS911 family protein; SPTR: B8CXV6 transposase IS3/IS911 family protein; PFAM: transposase" /codon_start=1 /transl_table=11 /product="transposase IS3/IS911 family protein" /protein_id="YP_003827954.1" /db_xref="GI:302392134" /db_xref="GeneID:9513431" /translation="MLLNYQIDQIKQLKNVSENLDIPYGTLIRWRREYKDKGDLAFPG HGKQKLTPEQKEIQRLKKELKDAKTERDILKKAVSIFSNEAK" misc_feature complement(1462227..>1462385) /locus_tag="Acear_1376" /note="Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed...; Region: HTH_Hin_like; cl01116" /db_xref="CDD:186341" gene complement(1462944..1463045) /locus_tag="Acear_1377" /db_xref="GeneID:9513432" CDS complement(1462944..1463045) /locus_tag="Acear_1377" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827955.1" /db_xref="GI:302392135" /db_xref="GeneID:9513432" /translation="MAQDYFKADPITILIVILILQQIGGGVLSGFDY" gene 1463260..1464490 /locus_tag="Acear_1378" /pseudo /db_xref="GeneID:9513433" gene complement(1464505..1465794) /locus_tag="Acear_1379" /db_xref="GeneID:9513434" CDS complement(1464505..1465794) /locus_tag="Acear_1379" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: cbi:CLJ_0076 transposase; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; SPTR: C3KS84 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003827956.1" /db_xref="GI:302392136" /db_xref="GeneID:9513434" /translation="MKLSFKFKPDFSHKQLEIVKELSWHCSKLYNITNYAIKNNKDIK PVYTRLENNFKDNWHTDYLHSHNRQQLFKQLVQDWKSYFNSIEDYNNNPSKYQGQPRP PKFKYLDNNPSEVIFTNLATRIREGNLLLSLSKEIKNRYQVDSLKFRLPTVIESLIDE DNLSMSKGHSVENSLQQVRIKQDNLTNQWYLLIIYKQQPKENSPGDNIMSIDLGLDNL ATLTFKDNTENYIINGKPLKSKNKYFNQEINRLQSIRMKQTGSKKFKDTKQIKKLRTK RRNYVFDYLHKASRKIVNLAKKHNVSKIVIGDLKEIKQGMDYNKSFVQVPIQRLKDLI EYKAKLEGIEVNIINEAYTSGCSAIDLEKLNKDNYNKSRRVERGLFQSNFGLTINADV NGSLNIMRKFLDKCIPELINRARDNGVVNPPKRLRVA" misc_feature complement(1464568..1465794) /locus_tag="Acear_1379" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature complement(1464856..1465608) /locus_tag="Acear_1379" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature complement(1464733..1464966) /locus_tag="Acear_1379" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature complement(1464592..1464810) /locus_tag="Acear_1379" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene complement(1465878..1467818) /locus_tag="Acear_1380" /db_xref="GeneID:9513435" CDS complement(1465878..1467818) /locus_tag="Acear_1380" /note="COGs: COG0840 methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660; KEGG: bha:BH3903 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: Q9K629 methyl-accepting chemotaxis protein; PFAM: HAMP domain; Cache domain; methyl-accepting chemotaxis protein (MCP) signaling domain" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer" /protein_id="YP_003827957.1" /db_xref="GI:302392137" /db_xref="GeneID:9513435" /translation="MLGIELNDSLKKSITLKVGVAIIVVLTVIFTLVILDFRQAQTEE INKEIEKIILNISNQINAENKRTVDLVETLAQYQEVGNLGEREESISYLRSFLDNHSN FSAAYFAYESNADGADNEYIGTLENAHNVAGRFIPYVHRTESGIEMEPLLDISTSTYY QTPKKTGQTTLTEPYDYQGEMITETTHPIEVDGEFMGIAGIDRSLTEFQNMLRNLNPF KTARFYLLSSENKVVGTSDEDKLLTKYLNEIDQYKDAFNPLINSDQEKIVHNKELDRV IAYAPIEIGGWKILMTVEQSEIMSAVNEATFKMIILGVVGVLILCGLLYWLIKSSLSP LNTLQGKVEEIANKGGDLTQRLDVEEENEVGKLADAFNDLLASLQEIMKNITEETEEV ASASQQLSASAEEGNAVIETTMNNIEQMTAGVEEASASSQQVTSFSEETGEIAEDGGE KLEQVMEQFENIKSSVEISTDNVEKLNELIQEIEEINDLITNIAEQTNLLALNASIEA ARAGEHGEGFAVVAEEIRELAEETNDATDNIANLIEKTTIKADETLEATKENEEQITK GDKRVSEAGEAFEDIMSRLGDTIEQMQQASAAIEQLAAGSDEISNATDEVNQVIEEVT ESSTDLADNSQRLQQMVNKFKV" misc_feature complement(1466679..>1466846) /locus_tag="Acear_1380" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(1465881..1466522) /locus_tag="Acear_1380" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1467855..1468184) /locus_tag="Acear_1381" /pseudo /db_xref="GeneID:9513436" gene complement(1469289..1469687) /locus_tag="Acear_1382" /pseudo /db_xref="GeneID:9513437" gene complement(1470113..1470526) /locus_tag="Acear_1383" /db_xref="GeneID:9513438" CDS complement(1470113..1470526) /locus_tag="Acear_1383" /note="InterPro IPR002934; KEGG: mma:MM_1472 nucleotidyltransferase; PFAM: DNA polymerase III subunit beta; SPTR: Q8PWV4 Putative nucleotidyltransferase; PFAM: Nucleotidyltransferase domain" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit beta" /protein_id="YP_003827958.1" /db_xref="GI:302392138" /db_xref="GeneID:9513438" /translation="MDKESIITTVREYCEEYKEIIGVYLFGSVAKDKFNNQSDIDIAL MLDDKLDKLSVFDFKLQIAVGLEELLDREVDVVIFSNADLRLKHQILKGQLIIGKDNK LRVRKESEALSNYLDMKYFYNMYESELGRKFTDGK" misc_feature complement(1470254..1470523) /locus_tag="Acear_1383" /note="Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins; Region: NT_KNTase_like; cd05403" /db_xref="CDD:143393" misc_feature complement(order(1470302..1470304,1470308..1470310, 1470404..1470406,1470410..1470415,1470434..1470436, 1470443..1470451)) /locus_tag="Acear_1383" /note="active site" /db_xref="CDD:143393" misc_feature complement(order(1470404..1470406,1470410..1470415, 1470434..1470436,1470443..1470451)) /locus_tag="Acear_1383" /note="NTP binding site [chemical binding]; other site" /db_xref="CDD:143393" misc_feature complement(order(1470302..1470304,1470404..1470406, 1470410..1470412)) /locus_tag="Acear_1383" /note="metal binding triad [ion binding]; metal-binding site" /db_xref="CDD:143393" misc_feature complement(order(1470302..1470304,1470308..1470310)) /locus_tag="Acear_1383" /note="antibiotic binding site [chemical binding]; other site" /db_xref="CDD:143393" gene complement(1470631..1470978) /locus_tag="Acear_1384" /db_xref="GeneID:9513439" CDS complement(1470631..1470978) /locus_tag="Acear_1384" /note="InterPro IPR011051:IPR013096:IPR014710; KEGG: kol:Kole_0253 cupin 2 conserved barrel domain protein; PFAM: cupin; SPTR: C5CD34 cupin; PFAM: Cupin domain" /codon_start=1 /transl_table=11 /product="cupin" /protein_id="YP_003827959.1" /db_xref="GI:302392139" /db_xref="GeneID:9513439" /translation="MSTNKIEEIKKENVSDGEKIKGTVKQVLTTEDEGISNIRMRYFT VEPGGHTPWHKHDWEHENYFVRGKGILVTKEEEIEVQPGMSGYVEANKMHQFKNPYDE SFEFICLIPVAEE" misc_feature complement(1470637..1470969) /locus_tag="Acear_1384" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene complement(1471027..1471761) /locus_tag="Acear_1385" /db_xref="GeneID:9513440" CDS complement(1471027..1471761) /locus_tag="Acear_1385" /note="COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: tte:TTE1740 Sir2 family NAD-dependent protein deacetylase; PFAM: Silent information regulator protein Sir2; SPTR: Q8R984 NAD-dependent deacetylase 2; PFAM: Sir2 family" /codon_start=1 /transl_table=11 /product="Silent information regulator protein Sir2" /protein_id="YP_003827960.1" /db_xref="GI:302392140" /db_xref="GeneID:9513440" /translation="MTKLKKLARLIHESERTVAITGAGISTESGIPDFRSSGGLWQQE NSIVLSNDTLERNPKCFYSFGQNIFEKIRAAEPNPAHYALAELEETGELEAVITQNVD SLHQKAGSQNVLEIHGHLRSGTCLSCERKYDIEEIFSKLKRNDVPDCDRCSGLIKPDI VLFGDPLPEDFVQSRKVVSEADLALVIGSSLEVAPANMLPKLADKQAVINLQQTTLDQ QAEVVINQKAGEVLSEVVDFINRTSY" misc_feature complement(1471039..1471752) /locus_tag="Acear_1385" /note="NAD-dependent deacetylase; Provisional; Region: PRK14138" /db_xref="CDD:172627" misc_feature complement(1471081..1471731) /locus_tag="Acear_1385" /note="SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+...; Region: SIR2; cl00195" /db_xref="CDD:193702" gene complement(1471809..1472519) /locus_tag="Acear_1386" /db_xref="GeneID:9513441" CDS complement(1471809..1472519) /locus_tag="Acear_1386" /note="KEGG: mta:Moth_0642 hypothetical protein; SPTR: Q2RKR9 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827961.1" /db_xref="GI:302392141" /db_xref="GeneID:9513441" /translation="MKGFDRPLKPEWVYEMIQRLEVGDKLSEHKEELDEVLKELTGKT GKRKVRTVIGRYFLKDLDKPRQRSVQDSLIFRLIKEQQLDEVKPVMLFNLLVKAPILQ YFSEQLFNLYERQQEINAAFLRKKAYQRIGERDIARRSLRNFLSTLTDFGILQQQDRK IFIWNKRLIVNEENFINFLKLYSKFYLKSPQISLNDLPEYLLFYFDLPNVREIAQKYN NVHWDYTRRLQAAIVTLY" gene complement(1472519..1474360) /locus_tag="Acear_1387" /db_xref="GeneID:9513442" CDS complement(1472519..1474360) /locus_tag="Acear_1387" /note="InterPro IPR013973; KEGG: tpd:Teth39_0929 alkaline phosphatase domain-containing protein; PFAM: PglZ domain protein; SPTR: B0K8X1 PglZ domain; PFAM: PglZ domain" /codon_start=1 /transl_table=11 /product="PglZ domain protein" /protein_id="YP_003827962.1" /db_xref="GI:302392142" /db_xref="GeneID:9513442" /translation="MEYSWYNAILDKIKSIEADIILVIDSEELLKSQGLQEKLKDLYS TVELYQSELLLRRNLKQEQEAIIIFESGNDIPYFLLDKYPEVEVSYRDIFPQLAEEVL DWLEEKEIEELYLYYQTNDFFTQLDSRETLEFVIKTLYEVALNGNQIENIVAFLIKYF FVKSEITGAINELVGEKLVSSNYTVNINQIRERDDFFIWLEGKWKEFLINERAEIDFS DPKLRYLIDDCFEQGLMQPVDLSNEDIDLETVINEGRANYWVRSGIQNLNRLSVKQEL KIEREKLEELLTGNLSIREWGIAAKIWGKISYLAYTEEMYESFISLQKRLDEKFINFV EEEYDRLVFDHRFQYAPLNNRILPHIVEEEPDKFALICFDGMSFKDWRVVKQYLTTNL DSVSLKEKFSLAMIPTVTSYSRQAIFSGELPRNNDDKYQEEKGLTQYLMNELDINKEE IYFDNCEVPTEINLLGYKAVGLIYRFIDKSAHNSLNPKLHYKSLTDILESSELAKVIM KLITNNFKIYFTSDHGNLFCKGNGVHPSRHLVDDRANRAAVYQHENLAKEIEVSNKLI LNFPNIIGDDYIVTMRDRKKFGNKRPALTHGGPNIEEVIIPLIEVSK" misc_feature complement(1472765..1473265) /locus_tag="Acear_1387" /note="PglZ domain; Region: PglZ; pfam08665" /db_xref="CDD:149651" gene complement(1474498..1477104) /locus_tag="Acear_1388" /db_xref="GeneID:9513443" CDS complement(1474498..1477104) /locus_tag="Acear_1388" /note="InterPro IPR002941:IPR002052; KEGG: mta:Moth_0639 DNA methylase N-4/N-6; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: Q2RKS2 DNA methylase N-4/N-6; PFAM: DNA methylase" /codon_start=1 /transl_table=11 /product="DNA methylase N-4/N-6 domain protein" /protein_id="YP_003827963.1" /db_xref="GI:302392143" /db_xref="GeneID:9513443" /translation="MDEDKLEPLEDLLDEMREIEGFPKGEDEDILELSDPPYYTACPN PYLDDFIGEYGTEYDPESDDYERKPFVGDIKESKRDSISLAHKYVTKVPYKAIMYFIM HYTKPGDIVFDGFAGSGMTGIAAQMCENPSEEMQKKIEDRLDSVEYGARKAVLNELSP AASFITSNYNFACNEEELKQKAEEIIAKVEEECGWVYETNHVKEATDTRTGKQATLFD IEKNKGKINHIIWSDMFICPYCESEFVLWEEAIDHEKGEMQDEFKCSSCNAEITKKEC DKAKEEYYDNLIGEKSIRVKKSPVLIDYSVGSKRFEKKPDKDDLELIKKIDDITIPYF TPNYRMPEGKESRRNDKFGMTHIHHFYTKRNLYVLAKFYNEIKKIDNKRIKDKLMFIF TSLLLRSSKKCIVHVSNFFHGGGGYVTTISGNLYIPSFRVETSVIENFKRRVNKTNKL NKYKQLKKDNARVNLGSATDLSMIPENSFDYMYIDPPFGSNLMYSELNFLTDSWLQVI ENNNSEAIINSVQNKDLVDYNNLMEQSFKEFYRILKPNRWITIEFNNSKATIWNKIQE SLTRAGFIIAQVAVLDKDSGSFVSNVSPGAVKNDLIINAYKPKKEFEDKFLKTAGEGL EADFIRQQLEHLPVEANIERTEQMLYSKMLAHYVENGFKIQYNANNFYQLLHDSFIER DGYWFLEEQADEYDRWKASLKLDEIEDIKEGNQVMFVTDEKSALTWLHNFLDEPKEYS EIYTGYEQVVTKTKDLIPELRDMLDNNFVMEDGKYRRPQTKEERQKIEENRERELERA WKDLLDKAKNGRRKIKNVRKEALIHGFTKCYQKENYEDIITVADRLYKSTLRSSGDIL DFVDIARMKLDQ" misc_feature complement(1476730..>1476846) /locus_tag="Acear_1388" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene complement(1477107..1480754) /locus_tag="Acear_1389" /db_xref="GeneID:9513444" CDS complement(1477107..1480754) /locus_tag="Acear_1389" /note="InterPro IPR003593; KEGG: mta:Moth_0638 hypothetical protein; SMART: AAA ATPase; SPTR: Q2RKS3 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="AAA ATPase" /protein_id="YP_003827964.1" /db_xref="GI:302392144" /db_xref="GeneID:9513444" /translation="MQVKDLINFDEIKDVIDIDSDLENEESCKALVDKYIISERLRGY LQEIAEDLAQPKHKSCQIIGSYGSGKSHLLAFLSALLDNPDFSSYIQDEKVREAFESN LNRRFAVVQFELQAGRTDLSHYFYDRVEMKLRDKYGIEIPSVDPDQVFDHKEKVREIL GKVKEVDPQMGLVVIIDEISDFLKQKVKKEKKHRDTQFMRVLAQASQTMDFMLIGSMQ EDILTDPEFNDEADSFGRTSERYRIVTISKEDIKKVVSQRALNKSLEQREELEELLTD YGQQIEEVHSKIDEFIDLYPVHPYVIEVFNQLPYFEKRGVIQFTVDEVKKILDEEFPA FITYDRIFDLIASKHTVKSLDEVAEVVKAIDTLNSKIPLLRDNLQEDARRIVKALAVL KLYGQTANNGATPEELANELLIISDKFSGADRIEMVLNKLREVTDGQFIAKSENNYYY IDLEHTRDYDVIIKRKTEDLYDGATDEELVKVLKSVFELDSDSDYDRVYDDYSYWPDK KSFRYGSFIYDDGSSEVEKGDGDFNFVFVSPYRDRTTIKQDGSTAVLNLEYDDELDTL LKKAAALTSLIKNSPYPKNIMRSRLKTCKGELKEKLLDKVINTEIENGTSYAGAGGLL SQQPDTLMEYYYEIKPALFGAYFSEKYDKYPKLANQLTPENIRGEVERTIKDILGSGE QVTVSNSQNLLKALQLLDSDNYPDSNNSPYAKLILKKLNNNKGKNVKIEEIVEELAGK PYGLNRELVYLILVVLTYNGETNLKKHGGKTVTAADLKDVLSSGLDAFDEISYITLET DFPVNEVAKVLRVLDINPGLIKQKKNRKDALKQFKNEVGDIENKINEVDQQLSNLKIK AKPNEHIDLDALLAKRSGIDNIPIEKFSKVKTVPGLKKIVLDDFELEELEIGLKFLDN FIEFLADFEEKIYDPYIHLKESMDFIKEYRNFFADEDIAALEEIADKCDEIVDDLSTL LEHDERRILKGKLQQYQRKYREIYYQTHEQKVGAGVEWSKLEKIKNNQELQQLKVLKD VRGLDTADFKRLQMKINKLSRAKCDSLEEEYLSGNYKCPYCQFPEFDASSLKDIDDTL DEMWDEIYDIKDEWEAQILEEIKNYEDNIRLLDQAEKEVIEEIQSAKTLPDKIDRELV KALNNLFSELEEIEVSGAEIEEIIFANGGVLDYDDFANKLEEVKEKILTQGDRTNLRI KRPADDREEEE" gene complement(1480754..1481230) /locus_tag="Acear_1390" /db_xref="GeneID:9513445" CDS complement(1480754..1481230) /locus_tag="Acear_1390" /note="KEGG: mta:Moth_0637 hypothetical protein; SPTR: Q2RKS4 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827965.1" /db_xref="GI:302392145" /db_xref="GeneID:9513445" /translation="MVNLDDLIRVSRDNHYKLLTLVGDNPAKVDEITAYLEDKDWEVY DVEENVLDLIEDIPEGKIYLRIGDKIKKWVNTLGDRIVLTNTSILCSPELDKITPLGA FKYLMRGSREAVLFLDARIRDNKAIYSRPGRDDYCEMDLSEVISEQIDNVIIGGDD" gene complement(1481407..1484058) /locus_tag="Acear_1391" /db_xref="GeneID:9513446" CDS complement(1481407..1484058) /locus_tag="Acear_1391" /note="InterPro IPR000209; KEGG: ava:Ava_3504 peptidase S8 and S53, subtilisin, kexin, sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Q3M7C5 peptidase S8 and S53, subtilisin, kexin, sedolisin; PFAM: Subtilase family" /codon_start=1 /transl_table=11 /product="peptidase S8 and S53 subtilisin kexin sedolisin" /protein_id="YP_003827966.1" /db_xref="GI:302392146" /db_xref="GeneID:9513446" /translation="MSGDNEFVYPHLELVNAAPYNKDERYKYGGGIGPSEKDRKEHSR KIKEDIDEVQETINIKAKDTGINPRLIFKIEYENSFSKDQLRRAGFIFLGNLPGNKEQ VVFSDQEGMEIFLEKWQEYSEGELTDKEYPQYRNIFDNIISIKPLDAEDRKGPKLKNE EIIDDKKYWLDIELWHRDSELEKDRKDLEEVMDQNGKITDYYTSDNLHLLRIKTDGFT LKELLEQEMVCQIDFPPKLRSEAREKVSLDLDDISFGEPDEDANGVCIIDSGIMPNHD LLEDALVHYDVFRDDLNDGIDESGHGTFVAGIALYGDVEECIEKKEFIPEVKLFSARV TDENNCLGPSDKLYIKQIKVAIEYYNDEFNCRVFNISLGDPEKVFMGNQYQSHWAQIL DDLARERDLIIVVPTGNISKMHFDKDLNLEGEKVVTEYPGYLFRRKSGLLDPATATNC ITVGAVANELRTSGRFIKHNEKKLNIKKIPVAKAKQPAPFTRSGLGINDTIKPEFIAS GGNIYFHGEHEMLMGEESMETGTFSLNYDFINDNRLFSCATGTSYAAPVIANLAARVL NYNSEFTSNTVRALLANSAIRPSRVDDTIEEHMQESHVDIIAFLNEIKDELSEDLKEK VEDCSNKGYITKSDKEDFLKSDSLPSQLKDLLRVTPGYPAEFDEYLLRVSGYGVPNLD KAIYSSEKRVTMYAEGKIGVDKFNVYEVPIPDEFTDSKGIRRIVVSLAYSPPTKNTRK DYCGYSMNLELIRGKSLEEVLEIASNDDKDEKYSELRTATRCELLPKKNLRSSSTLQR VIFERKQRSSEDYGDTYYLVVEFKDNWIGDSATFRDDFMEDYSVVVTLEHENEEVKIY EEVRQRVEEKVEEQIEQGVREHIKLKS" misc_feature complement(1482304..1483269) /locus_tag="Acear_1391" /note="Peptidase S8 family domain in Subtilisin-like proteins; Region: Peptidases_S8_Subtilisin_like_2; cd04847" /db_xref="CDD:173793" misc_feature complement(order(1482403..1482405,1482832..1482834, 1482943..1482945,1482991..1482993,1483156..1483158, 1483255..1483257)) /locus_tag="Acear_1391" /note="active site" /db_xref="CDD:173793" misc_feature complement(order(1482403..1482405,1483156..1483158, 1483255..1483257)) /locus_tag="Acear_1391" /note="catalytic triad [active]" /db_xref="CDD:173793" gene complement(1484066..1485085) /locus_tag="Acear_1392" /db_xref="GeneID:9513447" CDS complement(1484066..1485085) /locus_tag="Acear_1392" /note="COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003959:IPR003593:IPR003960; KEGG: bbr:BB0910 ATPase; PFAM: ATPase AAA; SMART: AAA ATPase; SPTR: Q7WNX5 Putative ATPase; PFAM: ATPase family associated with various cellular activities (AAA)" /codon_start=1 /transl_table=11 /product="ATPase AAA" /protein_id="YP_003827967.1" /db_xref="GI:302392147" /db_xref="GeneID:9513447" /translation="MPKGKFVEELLKAYRDNDYELFKEIAEKIIEDEKDKNHHRLANS LQEIIDSFSDNQEYQQNNSSSINDSYFNKMPRDDQDGADLVSIIKPKYYLEDVVLSNE NKRVINRIMAEYYGANQLRGYNLNAKRRILFCGPPGCGKTMTAQSLANEINLPLLYIH MDSLISSYLGDTASNLRKIFQYAEQGRWVIFFDEFDTIGKSRDDENEHGELKRAVNTF LQMLDNFKTETLLIAATNHQHLLDNAIWRRFDEIVYFDKPDIEQIQKLLKKKLRTFKS EIDFKKASEELVGMSHAQIERICKDAIKYSILYDIEIVNGEVLKECIEEENRRKKIYT GVDKE" misc_feature complement(1484315..1484734) /locus_tag="Acear_1392" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(1484309..1484704) /locus_tag="Acear_1392" /note="ATPases associated with a variety of cellular activities; Region: AAA; smart00382" /db_xref="CDD:128665" misc_feature complement(1484660..1484683) /locus_tag="Acear_1392" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(1484378..1484380,1484507..1484509, 1484657..1484680)) /locus_tag="Acear_1392" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(1484504..1484521) /locus_tag="Acear_1392" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(1484342..1484344) /locus_tag="Acear_1392" /note="arginine finger; other site" /db_xref="CDD:99707" gene 1485377..1485826 /locus_tag="Acear_1393" /db_xref="GeneID:9513448" CDS 1485377..1485826 /locus_tag="Acear_1393" /note="SPTR: C6PSY1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827968.1" /db_xref="GI:302392148" /db_xref="GeneID:9513448" /translation="MLAKLSYPMKKKAKRLIELKNKLDNTKLNKWLIGLMIISAIYTL AFSERYLTYLPIDAILQSLLDTEVSTTNSFIKIIDFTFLGTLIITTSATYLRIKSINK IKDKFQTLREDIISELDTDLCLCNAQCTCKDDFIKYMEEKDINLIFK" gene complement(1485914..1487629) /locus_tag="Acear_1394" /db_xref="GeneID:9513449" CDS complement(1485914..1487629) /locus_tag="Acear_1394" /note="InterPro IPR016024:IPR004155:IPR011989; KEGG: dal:Dalk_2626 sec-C motif domain protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein" /codon_start=1 /transl_table=11 /product="PBS lyase HEAT domain protein repeat-containing protein" /protein_id="YP_003827969.1" /db_xref="GI:302392149" /db_xref="GeneID:9513449" /translation="MTEEAERLYTKEDFINYCKHPEPLVRNWAFEYLTTLYPQTEEIS QYLPEFLAAADKEEDNELQYIIFTYLKENYKHLSGGLIYGCLKKELDIDTKAFLLNIL ARQGYQPEKVLAEIKQLLEKDEFNINGFLRLQKALGNLGTEEAYNYLRSMNPDLKLEM MDARSYLASLLKFKRPESVKEVTQKVLRNLDRCSYNHFFQELSKLFCGHEFSYYLCNF FSWMGDIERILDFLEEYWPGNSGVKRLQALIDESEVETLTEEPYETSFNYLINNIRAE FDSRYSFGVKEESLDLELLNSKQDEMSETDFWIGFILGIIEKERDYILEEEIELFLLY LLSLWIVLLEELDFESDIARARQDDDYLWEVFILDREFIPAEITELVLEKVDIFEERL ISLIDSDDYSSRVSRAIEVLGKANSKAAVPYIIEVIDNEQEDMVCEAAVEALRRIADI SIDRLMRAISQGDFTRIIYLTSVLEWQPYDSVASFLIELHQEGELEEELFVYTLKRVG SERGLDYLERMSFKGKSGYFFKTLIILSILNQREDNLELYREKLEKIKQQRASKFDFS FNLEA" gene 1487879..1489060 /locus_tag="Acear_1395" /db_xref="GeneID:9513450" CDS 1487879..1489060 /locus_tag="Acear_1395" /EC_number="3.5.1.14" /note="COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR011650:IPR010168:IPR002933:IPR017439; KEGG: ton:TON_0348 bifunctional carboxypeptidase/aminoacylase; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: Aminoacylase; SPTR: C4CJY7 Amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain; TIGRFAM: amidohydrolase" /codon_start=1 /transl_table=11 /product="amidohydrolase" /protein_id="YP_003827970.1" /db_xref="GI:302392150" /db_xref="GeneID:9513450" /translation="MKLENQLKKEVQKVSNRVVEWRRDFHRHPELAFQEERTSRKVRE LLTSWGIKTETVAQTGIIGLLEGSNRGKTVAIRADIDALPITEETNLPYRSQEEGKMH ACGHDAHTAIALGVAKVLTKFKDSLDGNIKFIFQPAEEGAGGAKPMIEAGALDKPPVE AIFGFHVWPDLPSGKIGLKKGPIMASADDLKLTIKGQGAHGARPHQGRDPITIGADTI VALQQLVSREVEARQPTVLSIGSFQAGSTYNVIPDKAVIKGTLRTLNPEVRSYIKERM TEVIDSLTQALQADYELEYNCQLPPTVNTPGYIEVLKEVAEEVSPGSSIVLNEASMGS EDFGYFLQEVPGAYFMLGTRNPDQGVVHPIHSSKFDLDEAVLPLGVEILCHSVLKSLI N" misc_feature 1487924..1489051 /locus_tag="Acear_1395" /note="Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]; Region: AbgB; COG1473" /db_xref="CDD:31662" misc_feature 1487930..1489042 /locus_tag="Acear_1395" /note="M20 Peptidase Aminoacylase 1 family; Region: M20_Acy1; cd03886" /db_xref="CDD:193507" misc_feature order(1488188..1488190,1488194..1488196,1488296..1488298, 1488374..1488376,1488971..1488973) /locus_tag="Acear_1395" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193507" misc_feature order(1488443..1488445,1488509..1488514,1488524..1488526, 1488533..1488535,1488542..1488544,1488593..1488613, 1488623..1488628,1488632..1488634,1488650..1488658) /locus_tag="Acear_1395" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:193507" gene 1489085..1490497 /locus_tag="Acear_1396" /db_xref="GeneID:9513451" CDS 1489085..1490497 /locus_tag="Acear_1396" /note="COGs: COG4145 Na+/panthothenate symporter; InterPro IPR001734; KEGG: gtn:GTNG_0289 sodium/panthothenate symporter; PFAM: Na+/solute symporter; SPTR: Q2B3M1 Sodium/panthothenate symporter; PFAM: Sodium:solute symporter family" /codon_start=1 /transl_table=11 /product="Na+/solute symporter" /protein_id="YP_003827971.1" /db_xref="GI:302392151" /db_xref="GeneID:9513451" /translation="MNIDWNSTLVMTAYLAITLSVASYYGGKNTDSSEDFSVGGRKFG IVILFFTMLATAVGAASVVGYTGWYYIRGLSQIWFVIGISVSYLIYLFYLAPKISDFG FEHNASTVGDWLEYRYDRITKNISSVLLIIAYLAITAFQYMAMAEIFTQVTNISYNYS LIITAAIVIIYTSIGGLWSIAATDVLQGAMTIIGLLVLTPIIISKAGGISQILAEVPD QHLQLFGHVDPVGALSFTLVFMLGIISWPDIWQRCYSAESKQSLKRSLGLFVVASIII TGGLVLFIGLGAKVLYPGYSSPEKILPFMIMKQMPNLLGSIFLAALVAVIMGTADSTL LISAVMFEKDIFSQIKPDASDATKLKVNRYATIIGGVIVLILAITAPSMFSIWVWSAD ITGATLAVPILLGMAWQRPSHYAALTSIITGFGGWAIARAGWIDWKPILLGSLLSLLG YLAATLLTTKETPTKQEQLN" misc_feature 1489097..1490359 /locus_tag="Acear_1396" /note="Sodium:solute symporter family; Region: SSF; cl00456" /db_xref="CDD:186007" gene complement(1490604..1493705) /locus_tag="Acear_1397" /db_xref="GeneID:9513452" CDS complement(1490604..1493705) /locus_tag="Acear_1397" /note="COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR014016:IPR014017:IPR000212; KEGG: hor:Hore_04140 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: B8D1U5 UvrD/REP helicase; PFAM: UvrD/REP helicase" /codon_start=1 /transl_table=11 /product="UvrD/REP helicase" /protein_id="YP_003827972.1" /db_xref="GI:302392152" /db_xref="GeneID:9513452" /translation="MINVLKASAGTGKTYRLSLEYVAALLRGEDFGKIVVMTFTRKAT AEIRERIFEHLEDILAEGAESEVVKNLEEIYNDLEVDLSQLEEVYEKMLCNKDQIKVY TIDSFINHIFREAIAPYLGIYSYEIVDDDQNREIVERVFKELLNNPADFKLMEDFLLE NVERDIDNYLTLIDRLIKDRWKFLLIEREERPKREVGNLVAEFEQAVDILKSIAQAKG KEFSQAYFKKDFRRYLELEGLTNKEEYITKNYKQFIKNKFWNGNKTRGKKVKALKEEL EAAYDEFRRKLANYIYNQEMIPYEEEVFNFSQRIFEIYDRLKFKEKIFTHADVSNYTY YYFYRDELNLLEGQSVSDYFFELLGSEVSSLLIDEFQDTSILQWSILQPLLAECETIV AVGDEKQSIYGWRGGEKELFANLEEILGGDSESLGTSYRSEREIIEFVNRFFTGIYEN WDYDGVEHLPEKDGGYVEVLYGDERAKINTDTKAFGKLGEDHQEKLHNLNQRVTEDLK AEIAQRIKEKLPNYNNVGILARSNNELAEIAAQLDKEGIPYILESNDSLVDHRAVKPL YFLLNYLAYSDYFELIKFLRSELVGINDGALKYLLQNKARVEEYMANGEIELEAAALS EILTTIRDLKKLDFNLLTSYLVEELGLLELYQDNAGALKNIYYFFSKMKKFESLPKFM AYLEENKDREELKQVGVKQADAVQLMTIHKSKGLSFETEFFYWKPSANQSNRGNSLEL YLDFDERFENIEDYMLTNSKYSQLFEYLNLDFHKQEEEKAFVEEINNVYVAMTRPVRN LFLYIEAPCSYKRLLDKQEWAGKDYGIYEEAILGGAKAASLKDLAERKSFGKLVVSES EEEGSQVELPDLQKYFQAEEISENRLAEINDDKDLQMNIQKEIKRNEGLAIHYYLEHI KYDTPQKREYARSMVLAKYGNLLGPERIEEAFVKVEDLLDRHQDYFSDRWDVYTEYEL VSGDKQYRIDRLIVDDEQQEVVIIDYKSGKTQEEEQLDRYAEIVEARLEDEYEIRTEF LEV" misc_feature complement(1490655..1493693) /locus_tag="Acear_1397" /note="putative recombination protein RecB; Provisional; Region: PRK13909" /db_xref="CDD:184388" misc_feature complement(<1493517..1493687) /locus_tag="Acear_1397" /note="UvrD/REP helicase; Region: UvrD-helicase; cl14126" /db_xref="CDD:196784" misc_feature complement(1491987..>1492613) /locus_tag="Acear_1397" /note="UvrD/REP helicase; Region: UvrD-helicase; cl14126" /db_xref="CDD:196784" misc_feature complement(1490637..>1490768) /locus_tag="Acear_1397" /note="CRISPR/Cas system-associated protein Cas4; Region: Cas4_I-A_I-B_I-C_I-D_II-B; cl00641" /db_xref="CDD:193896" gene complement(1493702..1496314) /locus_tag="Acear_1398" /db_xref="GeneID:9513453" CDS complement(1493702..1496314) /locus_tag="Acear_1398" /note="KEGG: hor:Hore_04130 hypothetical protein; SPTR: B8D1U4 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827973.1" /db_xref="GI:302392153" /db_xref="GeneID:9513453" /translation="MEINYVDYFDNLLEAVVDDSRPRVYVFNNYATKLEAKNYYCRPF LALESEFLMMSELKERLFPGDRLQLKEEKLVIIFYELLTEEDKQQLGISDYNDVIDLA NDFFNFYEELAEYKVDEIEDLRDWQQEKYDIFQDLRKRYIAKMEELDYTDKTLSYETA NFSLDFLQDFDEVVFVNVLEFTPLEKEIVSKLEVAGQTVQLYNQIKPEDYDEETLQLK SVTLPDELEPKVEIYQIDEDLLQLVNALVKVDEAETNYTILDGDFENSNYHNLLSSSK IKVDKDVSFTKTRLFRFLESLYTLLKNADFSSGGIRLRLGDLVEASHLAGFRDYYSLD RSELNGLNQLAQEDYVYFCEELIDDQLAPFRAVVEEIEQISGLRSLSGFCSYLEGLVV EKLADNRYKNDLNIFFGSLAELNSITEMGIVDSWNQYFTNNAQGLFLLILRYLRFKRV ETTVDDSGAEVEVKDLLTSSFVNRNRIMMLNVVEGIVPRAEEAAFLLTESQRTQVGLK TYQQQRLEMKYKFFRHLLSSEQAVIFSLKNEEQNIAVSSFIEELQLKYNLPTKEVEIT GADYPEIIKSIFDCDSCLLGVDEKLADKYSDRLEIEAEDFANQRLSLTYYKYSTLKRY CSYRFYLEQLAGLEAEQMEFSRELSPKVLGILVHRVFEEMINRVGDRIKDGGYKPEKE VIKEVITEKVASFDLKIPGYYEEYYEEVIFKAVQESVEYFLTVLPDRVKGNIKDIVTE WMPAQDESRVFMESEEVEIQLNGRIDLVIETDESKHIIDYKTGRGNTEQLDLYSLLYN QELEAGEMIDKSIYNVMDQKFDRGYRGSEERFRDKLRNLLEEAIIDSKEYQGQFKSRC KRCDYIDICKVGWR" misc_feature complement(<1494311..1494463) /locus_tag="Acear_1398" /note="CRISPR/Cas system-associated protein Cas4; Region: Cas4_I-A_I-B_I-C_I-D_II-B; cl00641" /db_xref="CDD:193896" misc_feature complement(1493717..>1494079) /locus_tag="Acear_1398" /note="CRISPR/Cas system-associated protein Cas4; Region: Cas4_I-A_I-B_I-C_I-D_II-B; cl00641" /db_xref="CDD:193896" gene complement(1496345..1497115) /locus_tag="Acear_1399" /db_xref="GeneID:9513454" CDS complement(1496345..1497115) /locus_tag="Acear_1399" /EC_number="3.1.3.25" /note="COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760:IPR020583:IPR020550; KEGG: gem:GM21_2706 inositol monophosphatase; PFAM: inositol monophosphatase; SPTR: C6E194 Inositol monophosphatase; PFAM: Inositol monophosphatase family" /codon_start=1 /transl_table=11 /product="inositol monophosphatase" /protein_id="YP_003827974.1" /db_xref="GI:302392154" /db_xref="GeneID:9513454" /translation="MLDLKECAKQVKEWARGVGEFQLERLDSNFQVNCKSSDVDLVTE VDELSEEILIEKINNNYPDHSILAEESGVADNDSDYRWVIDPLDGTTNYAHGFSIFAV SIALEYKEEVVLGVVYIPPLDHLYWAVKGEGAFLNDEWIEISRTNNLGEALLATGFPY DKATARKNNLDNFTKLVPQIRGIRRSGSAAFDLCNVASGVFDAFWELKLSFWDIAAGA LLVEEAGGEIVTFNKEKGITIVAGNDSLVEQILAEIGE" misc_feature complement(1496387..1497073) /locus_tag="Acear_1399" /note="IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be...; Region: IMPase; cd01639" /db_xref="CDD:30137" misc_feature complement(order(1496477..1496482,1496846..1496863, 1496906..1496911,1496978..1496980,1496996..1496998, 1497011..1497013)) /locus_tag="Acear_1399" /note="active site" /db_xref="CDD:30137" misc_feature complement(order(1496510..1496521,1496531..1496533, 1496555..1496575,1496585..1496587,1496594..1496599, 1496606..1496608,1496615..1496620,1496642..1496647, 1496651..1496653,1496657..1496665,1496819..1496836, 1496840..1496845,1496993..1496995,1496999..1497001)) /locus_tag="Acear_1399" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:30137" gene complement(1497356..1498120) /locus_tag="Acear_1400" /db_xref="GeneID:9513455" CDS complement(1497356..1498120) /locus_tag="Acear_1400" /note="COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623:IPR010755; KEGG: dat:HRM2_24840 DjlA; PFAM: heat shock protein DnaJ domain protein; protein of unknown function DUF1332; SMART: heat shock protein DnaJ domain protein; SPTR: C0QG10 DjlA; PFAM: DnaJ domain; Tellurite resistance protein TerB" /codon_start=1 /transl_table=11 /product="heat shock protein DnaJ domain protein" /protein_id="YP_003827975.1" /db_xref="GI:302392155" /db_xref="GeneID:9513455" /translation="MSWSGKLIGGGIGYMFGGPIGAVIGGLIGNKFDQSDKRQQSRPE LDEREKLDMMFFTTTFSMLAKFAQADGAVTRSEINVVDNFIKKDLQLDKEARELAIKI FDEAKRNQDSFEDFAEQFYDYFKEQESILVSMLDLLMRVAVADNNLHKQERKYLRKVK QIFNINDSQYKSIKARYTQEENQEENMDKYYKILEVSPEANMSEVKRKYREKVKEFHP DNIINKGLSEEFVDFAEEKFKEIQEAYEMIKKKKAS" misc_feature complement(1497365..1498057) /locus_tag="Acear_1400" /note="Dna-J like membrane chaperone protein; Provisional; Region: djlA; PRK09430" /db_xref="CDD:181850" misc_feature complement(1497632..1497949) /locus_tag="Acear_1400" /note="N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins; Region: terB_like_DjlA; cd07316" /db_xref="CDD:143585" misc_feature complement(order(1497665..1497667,1497686..1497688, 1497890..1497892,1497911..1497913)) /locus_tag="Acear_1400" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:143585" misc_feature complement(1497365..1497553) /locus_tag="Acear_1400" /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of...; Region: DnaJ; cl02542" /db_xref="CDD:194350" gene 1498552..1500261 /locus_tag="Acear_1401" /db_xref="GeneID:9513456" CDS 1498552..1500261 /locus_tag="Acear_1401" /note="COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006158:IPR007197:IPR006638; KEGG: tpe:Tpen_0071 radical SAM domain-containing protein; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A1RWA1 radical SAM domain protein; PFAM: radical SAM superfamily; B12 binding domain" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003827976.1" /db_xref="GI:302392156" /db_xref="GeneID:9513456" /translation="MSKPDLILLHPPSVYDFREKSIFYGPISDLIPSSPIFEMYPLGL LTIQSYLEKKGYNVRIVNLALKMMKNNDFNVRKFISNLNPKAFGIDLHWLPHAHGSLE IAKIVKEEHSKIPTIFGGLSSTYFHKELIDYPQVNYVLRGDSTEEPFYDLLQAIERET SLQKVPNLTWKDSKEETVVNSLDFNPPTLDHADLGIDTMIKNVFKYRDLESVIPFHGW LKNPITTVISVKGCRQGCITCGRSKYSNECYNERQGPIFRSPDSMIKNIKEIINFSRG PIFIVGDIRQAGRDYAEELLDKLSRINCKNEIVFELFRPAARDFLEKINDSVTNWSLE LSPESHSEEVRKAQNGTAIYTNEEMEQTLDIATNLDCNRIDVFFMIGLPKQTAKSVEE TIDYCEYLFQKYDTKLSCFISPMGPFLDPGSLAFEEPEKMGYKKFAHTLEDHRKRLTN SSWEEILSYETEWMTKKEIVEQTYKAGDKLNKLKSKYDRIDNQTSQRINKRIKQAKKL KKYLDREKKDLKISGDFNLKGEIDKFSISTVCEKSELDWPTTFGKFKILGGIKSLVSH FLS" misc_feature 1498585..1500042 /locus_tag="Acear_1401" /note="Fe-S oxidoreductase [Energy production and conversion]; Region: COG1032" /db_xref="CDD:31235" misc_feature 1498669..1499067 /locus_tag="Acear_1401" /note="B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the...; Region: radical_SAM_B12_BD; cd02068" /db_xref="CDD:30206" misc_feature 1499227..1499742 /locus_tag="Acear_1401" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene 1500583..1501833 /locus_tag="Acear_1402" /db_xref="GeneID:9513457" CDS 1500583..1501833 /locus_tag="Acear_1402" /note="COGs: COG3314 conserved hypothetical protein; InterPro IPR014226:IPR011642; KEGG: hor:Hore_10150 sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; SPTR: B8CWV2 sporulation integral membrane protein YlbJ; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ" /codon_start=1 /transl_table=11 /product="sporulation integral membrane protein YlbJ" /protein_id="YP_003827977.1" /db_xref="GI:302392157" /db_xref="GeneID:9513457" /translation="MSRAINKRSVYIKAAIGIFITISLIIFSEQGFEAAVQGLHTWWE IVFPALLPFFIMAEILMGLGVVHFIGALLEPLMRPVFKLPGVGAFAFAMGLASGYPIG AKITGNLRRDKLCTQVEGERLVAFCNTADPLFMIGAVAVGMFGKPEIGLTLAAAHYIS CIIVGLTMRFYDPPNSNEDVKTSPHQEEGLIKHALGELYRARKSDGRPLGELMGDAVM EAVNTLLLIGGYIILFSVLTEILHLMGITKLLTAILTPILKPFNIDTSLILPIISGLF EITNGADLASQTSAPLIEQIIITSGIIAWSGFSVHAQVITMVKGTDIRIKPYIWARVL HGITASIVTAIIFNPLQSISPLDTAPVFANQGYQLSKLSLGIDYLQRIEILSLGLIAF LSGLIAISIIFYIIQKITVVTIKT" misc_feature 1500667..1501698 /locus_tag="Acear_1402" /note="sporulation integral membrane protein YlbJ; Region: spore_ylbJ; TIGR02871" /db_xref="CDD:163053" misc_feature 1500718..1501017 /locus_tag="Acear_1402" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" gene 1501983..1502150 /locus_tag="Acear_1403" /db_xref="GeneID:9513458" CDS 1501983..1502150 /locus_tag="Acear_1403" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827978.1" /db_xref="GI:302392158" /db_xref="GeneID:9513458" /translation="MFKIKDKYSLGILAGLIANIIRTVFNYIAYYFNLSELLGIEIPS FMVACFYGSYP" gene complement(1502959..1503825) /locus_tag="Acear_1404" /db_xref="GeneID:9513459" CDS complement(1502959..1503825) /locus_tag="Acear_1404" /note="KEGG: kol:Kole_0840 hypothetical protein; SPTR: C5CGA9 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827979.1" /db_xref="GI:302392159" /db_xref="GeneID:9513459" /translation="MIKIVFEIFSTLLIIPCLVFVASVIANILFNQQVKQEVKELFNN TVENNNGVIQESDLEELPNSVQKWLEYSQVVGKERIRSVRLKQKAVMRIEEDKSWMSV KAEQYFTVDKPGFIWKARIKAAPFFYIVGRDKYQNGRGSMLIKILSLITVADSKGQEM DQATLVRYLAEIVWFPTAALSSYIEWEEIDSTSAKAIMSYRGVTASGVFEFDSQGRVI NFTAERYMEKNGEYDLETWVVSMDEYKECNGVCIPVQGAVTWQLETGDFNWFQFEITE IEYNKPVIYEKF" gene 1504003..1505334 /locus_tag="Acear_1405" /db_xref="GeneID:9513460" CDS 1504003..1505334 /locus_tag="Acear_1405" /note="COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR011066:IPR010920:IPR011014:IPR006685; KEGG: jan:Jann_0136 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: A0NUW0 Putative uncharacterized protein; PFAM: Mechanosensitive ion channel" /codon_start=1 /transl_table=11 /product="MscS Mechanosensitive ion channel" /protein_id="YP_003827980.1" /db_xref="GI:302392160" /db_xref="GeneID:9513460" /translation="MSSDLINEVTNQLIKMGNRYILLPKNIIQIGIMLIIFTLTLLTN KKVTSQIKSIVKNIFERSEVEFDEKVEALIEKLTFPITYTILFGLYILFGINFSWPYQ IVNIAVEITTAWIIIRFMSSFFKNTLLIRLFSFLILSIAILNIMNIYDSTINLLDDIA LSTGEIRISLLLIIQGFFLLSIFMWIATKITSFIEKKINNSKNLTPSLQVLINKFSRF TIFGFAILISLSSLGIDLTALTVLSGAIGVGIGFGLQKIVSNFISGIIILIDKSVKPG DVIEIDNTYGLISSLNSRFVSIVTLNGEEYLIPNEDFITKKVVNLSYSNKLIRLEVPV GISYNSNVEEAMKLIEEVANKNDRITNLQNPSCLLTGFGDSSINLKLKFWITDPEQGL ENIKSQVLLGIWKTFQEHDIEIPYPQYELHLSSVKRESTETSFSFQKKESI" misc_feature 1504651..1505247 /locus_tag="Acear_1405" /note="Mechanosensitive ion channel; Region: MS_channel; pfam00924" /db_xref="CDD:144501" gene 1505697..1506287 /locus_tag="Acear_1406" /db_xref="GeneID:9513461" CDS 1505697..1506287 /locus_tag="Acear_1406" /note="COGs: COG2364 membrane protein; InterPro IPR003740; KEGG: bha:BH1258 hypothetical protein; PFAM: protein of unknown function DUF161; SPTR: Q9KDF5 BH1258 protein; PFAM: Uncharacterized BCR, YitT family COG1284" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827981.1" /db_xref="GI:302392161" /db_xref="GeneID:9513461" /translation="MKIAKKWTKFLIGLVVLSFGLVLTIKSNLGVRPWDVFHIGLTKY FDITIGQASQLTGLAVIIISFLIIRVKPTLGTIISIIIVGFLIDLVVAFIPQPVNIIW QYLYLFCGILIFGTGVGTYISAQCGAGPRDNLMIALHKKLKFKLGIIRNGIEVIILVI GSILGGPVGIGTVCAALGTGPVVEFSLNMMNDSNDN" misc_feature 1505709..1506281 /locus_tag="Acear_1406" /note="Predicted membrane protein [Function unknown]; Region: COG2364" /db_xref="CDD:32511" misc_feature 1505724..1505957 /locus_tag="Acear_1406" /note="Uncharacterized BCR, YitT family COG1284; Region: DUF161; pfam02588" /db_xref="CDD:190354" gene complement(1506348..1508000) /locus_tag="Acear_1407" /db_xref="GeneID:9513462" CDS complement(1506348..1508000) /locus_tag="Acear_1407" /note="COGs: COG0840 methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR013163:IPR004090; KEGG: dhd:Dhaf_0078 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: C1SND4 methyl-accepting chemotaxis protein; PFAM: Cache domain; HAMP domain; methyl-accepting chemotaxis protein (MCP) signaling domain" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer with Cache sensor" /protein_id="YP_003827982.1" /db_xref="GI:302392162" /db_xref="GeneID:9513462" /translation="MLKKIVDKLTIRNKILLGVGLSVLIGMLILGSLILFEFKTFTDE NVHNLRELLIREKRQQIKSTVDVMSGTLSDIYDKQQGNLSKEELKELLVNEVNEANFG ENGYFYMYNYQGTVIAHGAKPQLINDNLWDLQRKDQYVIRDLAAAAEDGGGFVNFFWE HPETDKMEQKFGYAAPIEGTDWFIGSGAYESAINPKLKAESKKVQQTEWDILLSVFLV LAVELLLLGIIIFKISGYLESNFDKLLTGFKELEDGNLNATVEIDSQDEIGELGRAFN QFATEQSKLLANILGVVDDLSAYSEELSASAQEGNAAIETTTQLIEEMSTNIQQISAS AQEVTGLAQEANSQAEIGSENIEQAVSSMKEINNAVEETVEVISNLDSKSEEIGKIVD LITNIAEQTNMLALNASIEAARAGEHGEGFAVVAEEIRELAEETANATDEINNLVTET QQKSNIGLQSIKEVEAKAEKGLEIAEETGEVFAEINNANQETSSNIQQTAAATQDLVE NSDEIREAAEENDNVAREVANSSQELASMAQDLKELIEEFEV" misc_feature complement(1507599..1507853) /locus_tag="Acear_1407" /note="Cache domain; Region: Cache_2; pfam08269" /db_xref="CDD:149365" misc_feature complement(1507158..1507322) /locus_tag="Acear_1407" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(1506357..1507064) /locus_tag="Acear_1407" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(1506351..1506965) /locus_tag="Acear_1407" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1508139..1509206) /locus_tag="Acear_1408" /db_xref="GeneID:9513463" CDS complement(1508139..1509206) /locus_tag="Acear_1408" /note="COGs: COG0628 permease; InterPro IPR002549; KEGG: cce:Ccel_2541 protein of unknown function UPF0118; PFAM: protein of unknown function UPF0118; SPTR: Q2B7K9 Putative uncharacterized protein; PFAM: Domain of unknown function DUF20" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827983.1" /db_xref="GI:302392163" /db_xref="GeneID:9513463" /translation="MFTGRFFKAAYGLILILLILFLAGQIPYIMNPLSTVISIILLPV LLGGFFYYLLRPIVRFFTARVNSKNLAILITGLLIIIAAVVVIYFGGSIIYTELEKLI NYFSLNYEVIRENISRIIKLGNGHLDFLSDFNIQKRLLGFAQRMLEKFSNYNFMGAFS SLTNLGTIVVLIPFVVFYFLKDDHKIYYLLLSWFTEENKPQAKRMLREIDEALATYIG TQLIVAFILGSFMFVGYLLIGLPNSLALALIIAITSLVPILGPALGILPALFVALTTN FLMIVKLFIVLAVAQYLEGNLVRPIVQGGKLNIHPLVVLFLIIISILLFGVLGALFVV PIYVVVRIIIENKTAFYSNKQ" misc_feature complement(1508274..1509101) /locus_tag="Acear_1408" /note="Domain of unknown function DUF20; Region: UPF0118; cl00465" /db_xref="CDD:186015" gene complement(1509305..1510027) /locus_tag="Acear_1409" /db_xref="GeneID:9513464" CDS complement(1509305..1510027) /locus_tag="Acear_1409" /note="COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: dae:Dtox_3632 radical SAM domain protein; PFAM: radical SAM domain protein; SPTR: C7IDZ9 radical SAM domain protein; PFAM: radical SAM superfamily" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003827984.1" /db_xref="GI:302392164" /db_xref="GeneID:9513464" /translation="MEMEGVKLPVVEIFNSISGEGISAGEIVTFVRVAGCNLRCDYCD TMYSYQDEEYELLTPQQIVNRINNFGTQQVICTGGEPLEEDKPKRYLPLYLAKQGFEV RIETNGSWSVYNQQELQKFGLDGEGINYTLDIKCPSSNMAEYNLFTNLEQLGLNDEIK FVVQDKSDIDYALKVIDDYKNELSKQEIVINFSPVFEELAPKKLVSILQEHQTYFAQF NLKVRLSIQLHKLIWDPEVTGV" misc_feature complement(1509323..1510015) /locus_tag="Acear_1409" /note="Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones]; Region: NrdG; COG0602" /db_xref="CDD:30947" misc_feature complement(<1509623..1509925) /locus_tag="Acear_1409" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(1509635..1509637,1509707..1509715, 1509788..1509793,1509797..1509799,1509899..1509904, 1509908..1509910,1509914..1509916,1509920..1509922)) /locus_tag="Acear_1409" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" gene complement(1510029..1510526) /locus_tag="Acear_1410" /db_xref="GeneID:9513465" CDS complement(1510029..1510526) /locus_tag="Acear_1410" /note="COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: apa:APP7_1154 6-pyruvoyl tetrahydrobiopterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: C7IE00 Putative uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein" /codon_start=1 /transl_table=11 /product="preQ(0) biosynthesis protein QueD" /protein_id="YP_003827985.1" /db_xref="GI:302392165" /db_xref="GeneID:9513465" /translation="MIQLNINSEVQVMSQVSVTKSFSWDMAHMLAGHEDQCKNLHGHT YKLEVEVTSKSGKLQAAGASQGMIIDFKDLKQVVTEEIVAPLDHAFLYWAKSPDEVEH QLAATLQDADRKVVSVDFRPTAENMANYFWEILQNNFTKLDIEVVSVKVWETPTSYAE VKGVR" misc_feature complement(1510038..1510475) /locus_tag="Acear_1410" /note="Tunnelling fold (T-fold). The five known T-folds are found in five different enzymes with different functions: dihydroneopterin-triphosphate epimerase (DHNTPE), dihydroneopterin aldolase (DHNA) , GTP cyclohydrolase I (GTPCH-1), 6-pyrovoyl...; Region: TFold; cl00263" /db_xref="CDD:193736" misc_feature complement(order(1510050..1510052,1510068..1510070, 1510398..1510400,1510404..1510406)) /locus_tag="Acear_1410" /note="active site" /db_xref="CDD:29764" gene complement(1510504..1511175) /locus_tag="Acear_1411" /db_xref="GeneID:9513466" CDS complement(1510504..1511175) /locus_tag="Acear_1411" /note="COGs: COG0603 PP-loop superfamily ATPase; InterPro IPR004479:IPR018317:IPR014729; KEGG: ckr:CKR_0369 hypothetical protein; PFAM: Queuosine synthesis-like; SPTR: C7IE01 ExsB protein; TIGRFAM: exsB protein; PFAM: ExsB; TIGRFAM: exsB protein" /codon_start=1 /transl_table=11 /product="preQ(0) biosynthesis protein QueC" /protein_id="YP_003827986.1" /db_xref="GI:302392166" /db_xref="GeneID:9513466" /translation="MKKAVVLFSGGLDSTTALYLAKSKGYQVYALSFKYGQSHSRELE AAKRIADQVGVAEHVVVETSLSAWGGSALTDQEMDIPQGEKEREEIPTTYVPARNMIF LSYAASYAEAVGAHDIFIGVSEVDYSGYVDCRQEFIDAMEEAINQGTVCGAEEDNPIK IQAPFINLTKAEEIELGMELGVDYSLTWSCYRGEELACGNCDSCMLRLKAFEEAGYDD PIEYK" misc_feature complement(1510537..1511169) /locus_tag="Acear_1411" /note="ExsB is a transcription regulator related protein. It is a subfamily of a Adenosine nucleotide binding superfamily of proteins. This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome. In...; Region: ExsB; cd01995" /db_xref="CDD:73293" misc_feature complement(order(1511062..1511064,1511068..1511070, 1511134..1511145,1511149..1511157)) /locus_tag="Acear_1411" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:73293" gene complement(1511196..1511957) /locus_tag="Acear_1412" /db_xref="GeneID:9513467" CDS complement(1511196..1511957) /locus_tag="Acear_1412" /note="COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR008275:IPR002731; KEGG: cbi:CLJ_B1663 CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; SPTR: C3KVW0 Putative CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase" /codon_start=1 /transl_table=11 /product="CoA-substrate-specific enzyme activase" /protein_id="YP_003827987.1" /db_xref="GI:302392167" /db_xref="GeneID:9513467" /translation="MKVLGIDLGSREVKVIVMNKNNIIDQFKVSTMSFYRDYCNFAGR IIVDKDKLDVSQTKIKISTGYGKNNTDLKEFEPINEIKAHTYGAIYQTGLKNFILLDV GGQDVKAVKVEKGLITDLELNEKCAASCGRYLENMANVLEVSLTEMSNYYQDPVELNS TCAVFSESELIGKIAEGAQIERLCAGVNYSMYKRLRPLLTQFKGRRLIISGGVAYNQA ITRYLETDYDQVIALDKPQFNGAIGCCYYGLLMDN" misc_feature complement(1511229..1511948) /locus_tag="Acear_1412" /note="FGGY family of carbohydrate kinases, N-terminal domain; Region: FGGY_N; cl09121" /db_xref="CDD:195797" gene complement(1511938..1512954) /locus_tag="Acear_1413" /db_xref="GeneID:9513468" CDS complement(1511938..1512954) /locus_tag="Acear_1413" /note="COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: cby:CLM_1793 2-hydroxyglutaryl-CoA dehydratase, D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; SPTR: C1FN22 2-hydroxyglutaryl-CoA dehydratase, D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component" /codon_start=1 /transl_table=11 /product="2-hydroxyglutaryl-CoA dehydratase D-component" /protein_id="YP_003827988.1" /db_xref="GI:302392168" /db_xref="GeneID:9513468" /translation="MNKIGITTTVPVEVLLAAGYQAVDLNNLFITSDKYDQYIEQAER DGFPKNSCAWIKGIYGACLKHNIKEVISVLEGDCSNTHALAEVLKARGITTYPLAYPY SHKLDDVKEAINHFMDLFGVTRKEVEEVRDKLNNIRSLAKEIDRLTWKDSKATGFENH LYQINCSDFTGDVDSFAEELKAKINEIEKRESIDKKVRLGYIGVPPMMDDLYEFVTKF NAYIVYNEVQREFAFPRAKQADNIYQQYYDYTYPYDLDFRLEKIKEQIEVRNLDGLIH YTQSFCYRELEDVVIKEELEIPILNIRGDKSRQLDSRMKLRLEAFLDMLGDLKEGRNE GFRN" misc_feature complement(1511980..1512954) /locus_tag="Acear_1413" /note="Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB [Amino acid transport and metabolism]; Region: HgdB; COG1775" /db_xref="CDD:31961" gene complement(1513140..1514291) /locus_tag="Acear_1414" /db_xref="GeneID:9513469" CDS complement(1513140..1514291) /locus_tag="Acear_1414" /note="KEGG: vsa:VSAL_I1074 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827989.1" /db_xref="GI:302392169" /db_xref="GeneID:9513469" /translation="MKKLSITLALVLVVAMALPAMAAEVKVNDNAVNISGEVEIEQTD NNSDNTELVGTEDTLETTLTLYIDSQISEKVSVFSTLEIADNNDDMTDDFDVEEAGVD VKDVFGPIGLKAGKMELVSTDAMLYDYDEIEKDNNFATFYYEEGNVNAMVGNTLDDDG DESLGSATVAKFGVTDLGVIDSLDFDYIGVGDFQTSVANYFDFSNKLNDLGNLNEKYI DYSDFDGYTLKAAKNFGVVDTALTLGNVDSENIDSADAVSLDLSTDQLLPGATLSLAY GDVEAGYVQPFQDSYLNNAELPYGLTDFDVIQPGVNFDITDKLNVDFSYAMYDADDVD MDEDYLDLVFAYDLAENTTLDLEYENHDYDIDGASDDDETITTTLTTKF" gene complement(1514756..1515841) /locus_tag="Acear_1415" /db_xref="GeneID:9513470" CDS complement(1514756..1515841) /locus_tag="Acear_1415" /note="KEGG: mpe:MYPE6470 DNA topoisomerase IV subunit A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827990.1" /db_xref="GI:302392170" /db_xref="GeneID:9513470" /translation="MKKFSILLALVLVLGLAVPAMAAADVDVSTTVGVENVYDDSKDE SSATEGYLYLFLEGNPTENVNFYSEIDFTGYFDGNKNEEDVDVYEAWIEVDEVVGPVD VKLGRMYEESADNVLYEYDSDDFVRLGYEAGNVSAKFGHNLDSEGDDAPATAGDSEAF AEFKATDLGLLDQASLNYTKDNNLTDADGNATGDSYEGYTVKLTNDFDVVDASLLYGT ADGEYASGNDWNESADITALGLSTDQLFPGATLSLDYADVEENFVKAEDQDSYLNDTV TGDDFDMIKPGVNFDLTDKTNVDFSYAMYSADNDDADDDYLDLLITHNVAENTTLEVE LEDHSYDGSNITDDDETIITTTLETNF" gene complement(1516245..1516706) /locus_tag="Acear_1416" /db_xref="GeneID:9513471" CDS complement(1516245..1516706) /locus_tag="Acear_1416" /note="KEGG: tpd:Teth39_1299 hypothetical protein; SPTR: B0K9Z0 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827991.1" /db_xref="GI:302392171" /db_xref="GeneID:9513471" /translation="MQDKDLLQLNNILDELEETVETADSLPLTNKVLVNPDHILRLVA KLKNMMPAEIERAEEIVNRKKEILAEAEQAAEKKVERKISESQVIKKAEDKAQEIVDE AKRVASEIRTGVDTYGDEVLAEVEDKLEEKLNEVRRNRAELKQQEDLKQTS" gene complement(1516709..1517194) /locus_tag="Acear_1417" /db_xref="GeneID:9513472" CDS complement(1516709..1517194) /locus_tag="Acear_1417" /EC_number="2.7.7.3" /note="COGs: COG0669 phosphopantetheine adenylyltransferase; InterPro IPR004821:IPR001980:IPR004820:IPR014729; KEGG: cno:NT01CX_2230 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: A0Q101 phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain" /codon_start=1 /transl_table=11 /product="phosphopantetheine adenylyltransferase" /protein_id="YP_003827992.1" /db_xref="GI:302392172" /db_xref="GeneID:9513472" /translation="MGRAAVYPGSFDPITNGHLDIIERTANIFDNVIVAVSNNPNKDH LFSREERVQMIEEAIVDYEEIEVDAFDGLLIDYIREQKAEIIVRGLRAVSDFEAEFQM ASMNKKLDSDIETIFMMTKNQYVYLSSSIIREVSELGGCIEGLVPENVIPKLREKIGG E" misc_feature complement(1516742..1517194) /locus_tag="Acear_1417" /note="Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism]; Region: NadD; COG1057" /db_xref="CDD:31257" misc_feature complement(1516727..1517182) /locus_tag="Acear_1417" /note="Phosphopantetheine adenylyltransferase; Region: PPAT; cd02163" /db_xref="CDD:173914" misc_feature complement(order(1516814..1516816,1516823..1516825, 1516835..1516837,1516877..1516879,1516889..1516891, 1516898..1516903,1516922..1516924,1516928..1516933, 1516973..1516981,1517069..1517071,1517084..1517086, 1517132..1517134,1517141..1517146,1517162..1517176)) /locus_tag="Acear_1417" /note="active site" /db_xref="CDD:173914" misc_feature complement(1517141..1517152) /locus_tag="Acear_1417" /note="(T/H)XGH motif; other site" /db_xref="CDD:173914" gene complement(1517197..1517745) /locus_tag="Acear_1418" /db_xref="GeneID:9513473" CDS complement(1517197..1517745) /locus_tag="Acear_1418" /note="COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398:IPR016065:IPR002052; KEGG: hor:Hore_10130 methyltransferase; PFAM: protein of unknown function methylase SPTR: B8CWV0 Putative methyltransferase; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family" /codon_start=1 /transl_table=11 /product="methyltransferase" /protein_id="YP_003827993.1" /db_xref="GI:302392173" /db_xref="GeneID:9513473" /translation="MRVIAGKSKGHNLRSISGTEVRPTIDRVKEALFNILGPEIIDID FLDLYAGFGGLGIEALSRGAASSTFIDNSARQIGIIEENLKLTGLEQQAEVIQGDVLT QLGRFTPQSFDIIVMDPPYQAGLLEPTIEKIMQYDLLKEAGIISVEHHKQDEIAIEFD NLELIRERDYGNTCLSLYMKGD" misc_feature complement(1517302..1517616) /locus_tag="Acear_1418" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(1517392..1517394,1517446..1517454, 1517530..1517535,1517584..1517604)) /locus_tag="Acear_1418" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(1517861..1520242) /locus_tag="Acear_1419" /db_xref="GeneID:9513474" CDS complement(1517861..1520242) /locus_tag="Acear_1419" /EC_number="3.6.1.-" /note="COGs: COG1200 RecG-like helicase; InterProIPR016027:IPR004609:IPR014021:IPR001650:IPR 004365:IPR011545:IPR014001:IPR019793; KEGG: hor:Hore_10120 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: B8CWU9 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase RecG" /protein_id="YP_003827994.1" /db_xref="GI:302392174" /db_xref="GeneID:9513474" /translation="MADKEEILQKLLKPVGIEKKAGYNNSSVFGGFDNYILQWLDRLA ELSSDERVLELIADLKELFSDYSRVQIKQRQKKLAAGQELFNSLSNLIQEETVEEDSM QRLPPIWQKSIRYVKGVGKKRAEKLARLEIDTLRDMLFYIPRDYRDWSKNLPIRELSP DSEVTATGQVVDSTELRPRKGLTITKVIISDNTGRLAGVWFNQSYIKQKFKPGMAVSF SGEVKQEYGELQITHPHYEIMDSDKELDPGKILPVYSTTQGLSQNLLRKIVSRILKEH LDRFPESLSPGIKDKYDLLDVKEALYKIHFPDQIREVKEARQRLAFGELFILQLGILL KKTDLLTEEEGLVHTGSDELITNFLSDLPFELTSAQRRVWAEIKDNLESSIVMNRLVQ GDVGSGKTVVATLALLKAVSSGYQGAMMAPTEILAEQHYLSLKESLEEYGLQIGLLVG SLKKSERKEVIAGIESGEVDIVIGTHALLQEEVSFAKLGLVITDEQHRFGVRQRAILK EKGENPDVLVMTATPIPRTLALTLYGDLDLSVIDELPPGRKPVITEWRREKDFDKIFD FIRQEVKSGRQAYIVCPLVEESEELDVRSAENMAEKLDEDIFPEFKIGLLHGQLKTDE KEAVMEGFRSQQIDILVSTTVIEVGVDVANATLMVILDAQRFGLAQLHQLRGRVGRSE YQSYCILVADPGTETGRERMKIMTQSTDGFVIAEEDLQLRGPGEFFGTRQHGLPDLEV ADLLRDSRLVELARKEARKVVDSDPKLQQEEHQLLADLLQAKFGDGFELIDVS" misc_feature complement(1517864..1519909) /locus_tag="Acear_1419" /note="ATP-dependent DNA helicase RecG; Provisional; Region: PRK10917" /db_xref="CDD:182836" misc_feature complement(1519529..1519735) /locus_tag="Acear_1419" /note="RecG_wedge_OBF: A subfamily of OB folds corresponding to the OB fold found in the N-terminal (wedge) domain of Escherichia coli RecG. RecG is a branched-DNA-specific helicase, which catalyzes the interconversion of a DNA replication fork to a four-...; Region: RecG_wedge_OBF; cd04488" /db_xref="CDD:72960" misc_feature complement(order(1519550..1519552,1519628..1519630, 1519640..1519642,1519691..1519693,1519712..1519714)) /locus_tag="Acear_1419" /note="ssDNA binding site; other site" /db_xref="CDD:72960" misc_feature complement(order(1519529..1519531,1519586..1519588, 1519592..1519594,1519598..1519600)) /locus_tag="Acear_1419" /note="generic binding surface II; other site" /db_xref="CDD:72960" misc_feature complement(1518674..1519084) /locus_tag="Acear_1419" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature complement(1519043..1519057) /locus_tag="Acear_1419" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature complement(1518752..1518763) /locus_tag="Acear_1419" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature complement(1518173..1518580) /locus_tag="Acear_1419" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature complement(order(1518308..1518316,1518389..1518394, 1518485..1518496)) /locus_tag="Acear_1419" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(order(1518203..1518205,1518212..1518214, 1518224..1518226,1518290..1518292)) /locus_tag="Acear_1419" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene complement(1520308..1521168) /locus_tag="Acear_1420" /db_xref="GeneID:9513475" CDS complement(1520308..1521168) /locus_tag="Acear_1420" /note="COGs: COG1307 conserved hypothetical protein; InterPro IPR003797; KEGG: hor:Hore_10110 DegV family protein; PFAM: DegV family protein; SPTR: B8CWU8 DegV family protein; TIGRFAM: degV family protein; PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family" /codon_start=1 /transl_table=11 /product="degV family protein" /protein_id="YP_003827995.1" /db_xref="GI:302392175" /db_xref="GeneID:9513475" /translation="MSAIKVVTDSTSDLSSGLLNKFGIGMIPLTVNIDNQFFIDKINI SARGFFERLEQEDELPTTSQPAVGKFKERYFQLAEEYDTIISIHISDKLSGTYRTAQL AAEAVQEEAEVDIRVIDSKSASLGLGFLAIYAAEAVSQDRDIGEIMEGIKLRRNAVSI LFTIDTLEYLQQGGRIGKAKAFLGDLLNIKPILEVDETGEVNFHSQVRGKKRLFRKVK RLARRKLKERTLDFPPKLALLHGAAMNDLRELQSEIIELADWESVVVSEIGPVIGTHV GPGALGVVIL" misc_feature complement(1520314..1521159) /locus_tag="Acear_1420" /note="Uncharacterised protein, DegV family COG1307; Region: DegV; cl00577" /db_xref="CDD:189119" gene complement(1521197..1522867) /locus_tag="Acear_1421" /db_xref="GeneID:9513476" CDS complement(1521197..1522867) /locus_tag="Acear_1421" /note="COGs: COG1461 kinase related to dihydroxyacetone kinase; InterPro IPR004007:IPR019986; KEGG: hor:Hore_10100 Dak phosphatase; PFAM: Dak phosphatase; SPTR: B8CWU7 Dak phosphatase; TIGRFAM: DAK2 domain fusion protein YloV; PFAM: DAK2 domain; TIGRFAM: DAK2 domain fusion protein YloV" /codon_start=1 /transl_table=11 /product="DAK2 domain fusion protein YloV" /protein_id="YP_003827996.1" /db_xref="GI:302392176" /db_xref="GeneID:9513476" /translation="MRSKNKVKQSNTKGKLYTLNAVQLKEALKFSVDYFADFKEEIDR LNVFPVPDGDTGTNMYLTLSKAVDEIEGLTTESVSELLESFAAGALMGARGNSGVIFS QLLRGFSEEIKAEDGLGIAEIASGLDNAAAVAYQGVMKPTEGTILTVAREVGETALSL AEEKKEVDEFLQAVVKQAESTVEKTPQLLSPLKEAGVVDAGGRGYEIFLEGIYKYFAA DDITHSKPAEDDIASDSKAESKQLPSLEYKYCTEFIIKEPELNSKELRGRIEEYGASL LVVEGNGFIKVHIHSNNPGLVLEAGLEAGSLTGIKIDNMEEEQHENRVVAKESEEAVK EEKKDRIGVIAVAAGEGIIDLFDSLGVDLVIEGGQSMNPSTEDLLEAIREVKADKVII LPNNKNVISAAKQVVEVADKEIEVVTTKSMPEGIAAMMMFSPAGRLTEIKEMMEEEAG EVKTGEVTYAVCDSDLNDLNIAEGDILGLVEGNIEVVTKDRIEAATEIVDKLIELEDY LVTIYVGDEVEEKEVKRLEERLEDEVMELDLEICNGGQPLYYYLIAVE" misc_feature complement(1521200..1522753) /locus_tag="Acear_1421" /note="DAK2 domain fusion protein YloV; Region: YloV; TIGR03599" /db_xref="CDD:188350" misc_feature complement(1522226..1522723) /locus_tag="Acear_1421" /note="DAK2 domain; Region: Dak2; cl03685" /db_xref="CDD:194673" gene complement(1522851..1523216) /locus_tag="Acear_1422" /db_xref="GeneID:9513477" CDS complement(1522851..1523216) /locus_tag="Acear_1422" /note="COGs: COG1302 conserved hypothetical protein; InterPro IPR005531; KEGG: dsy:DSY2678 hypothetical protein; PFAM: protein of unknown function DUF322; SPTR: Q24U25 Putative uncharacterized protein; PFAM: protein of unknown function (DUF322)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827997.1" /db_xref="GI:302392177" /db_xref="GeneID:9513477" /translation="MQQELENELGKITISKEVISIIAGMAAVECYGLVGMATQRVKDG LNELLGRENLRKGVEVVVGEGTVSIDLYIIVEYGVNISEVANNIIDKVKYTLEELAGV EVSEININVQGVRVGEVEE" misc_feature complement(1522872..1523195) /locus_tag="Acear_1422" /note="Protein of unknown function (DUF322); Region: DUF322; cl00574" /db_xref="CDD:153866" gene complement(1523220..1523435) /locus_tag="Acear_1423" /db_xref="GeneID:9513478" CDS complement(1523220..1523435) /locus_tag="Acear_1423" /note="InterPro IPR015077; KEGG: glo:Glov_2077 hypothetical protein; PFAM: Domain of unknown function DUF1858; SPTR: B3E3H4 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1858)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003827998.1" /db_xref="GI:302392178" /db_xref="GeneID:9513478" /translation="MKIKKDMYVLDVLKEYPEVKKVLSDYGLSCSGCLGVDSAQIEEI AFNHEIDLESLLADLNKAVEKMEEKEE" misc_feature complement(1523256..1523429) /locus_tag="Acear_1423" /note="Domain of unknown function (DUF1858); Region: DUF1858; cl14817" /db_xref="CDD:196831" gene 1523605..1523835 /locus_tag="Acear_1424" /db_xref="GeneID:9513479" CDS 1523605..1523835 /locus_tag="Acear_1424" /note="InterPro IPR001383; KEGG: hor:Hore_10080 ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: B8CWU5 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L28P" /protein_id="YP_003827999.1" /db_xref="GI:302392179" /db_xref="GeneID:9513479" /translation="MAKHCEICGKGSNKANAVTRRGKAKKEGGVGRNVTQRAKRTQKP NLQKVKAMVDGSPKRIHVCTKCLKAGKVERAY" misc_feature 1523605..1523811 /locus_tag="Acear_1424" /note="Ribosomal L28 family; Region: Ribosomal_L28; cl00367" /db_xref="CDD:185945" gene complement(1523900..1525078) /locus_tag="Acear_1425" /db_xref="GeneID:9513480" CDS complement(1523900..1525078) /locus_tag="Acear_1425" /EC_number="1.1.1.38" /note="COGs: COG0281 Malic enzyme; InterProIPR016040:IPR012301:IPR012302:IPR015884:IPR 001891; KEGG: amt:Amet_1304 malate dehydrogenase; PFAM: malic protein NAD-binding; malic protein domain protein; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating); SPTR: A6TMU1 Malate dehydrogenase (Oxaloacetate-decarboxylating); PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain" /codon_start=1 /transl_table=11 /product="Malate dehydrogenase (oxaloacetate-decarboxylating)" /protein_id="YP_003828000.1" /db_xref="GI:302392180" /db_xref="GeneID:9513480" /translation="MSVDEEALKLHREHKGKLSIESKVPVENKDQLSLAYTPGVAAPC SKIEEDDRLADEYTARGNLVAVVTDGSAVLGLGDIGPKAAMPVMEGKAVLFKEFAGVD AFPLCLDTQETDEIIETVKRLAPTFGGINLEDIAAPACMEIEARLKEELDIPVFHDDQ HGTAIVVLAGLINALRYVDKELEEAVVVVNGAGSAGIAIAKLLLSVGVKDVILADIFG ILHPDQEEMNEIQSEMAEMTNQKNLTGDLTEAMKGADVFIGVSAPEIVTEDMVASMAE DPIVFAMANPVPEIRPKAARRAGAKVVGTGRSDYANQINNVLAFPGIFRGALDVRAAD INEEMKIAAAYAIADLIFKEELKADYVIPDPFNKQVVPEVATAVAKAAVESGVARQEI " misc_feature complement(1523903..1525078) /locus_tag="Acear_1425" /note="Malic enzyme [Energy production and conversion]; Region: SfcA; COG0281" /db_xref="CDD:30629" misc_feature complement(1524635..1525036) /locus_tag="Acear_1425" /note="Malic enzyme, N-terminal domain; Region: malic; pfam00390" /db_xref="CDD:144108" misc_feature complement(1523972..1524601) /locus_tag="Acear_1425" /note="NAD(P) binding domain of malic enzyme (ME), subgroup 2; Region: NAD_bind_2_malic_enz; cd05311" /db_xref="CDD:133453" misc_feature complement(order(1524131..1524133,1524137..1524139, 1524161..1524163,1524224..1524232,1524284..1524286, 1524296..1524301,1524431..1524436,1524494..1524505)) /locus_tag="Acear_1425" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:133453" gene complement(1525182..1525364) /locus_tag="Acear_1426" /db_xref="GeneID:9513481" CDS complement(1525182..1525364) /locus_tag="Acear_1426" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828001.1" /db_xref="GI:302392181" /db_xref="GeneID:9513481" /translation="MVDSPQRNNEFRIGDIVIKASETKQVYFEVTDITEDYIKIEALE MPLSTYVTSKEIVKIR" gene complement(1525443..1526570) /locus_tag="Acear_1427" /db_xref="GeneID:9513482" CDS complement(1525443..1526570) /locus_tag="Acear_1427" /EC_number="5.1.1.1" /note="COGs: COG0787 Alanine racemase; InterProIPR009006:IPR000821:IPR001608:IPR011079:IPR 020622; KEGG: hor:Hore_01680 alanine racemase; PFAM: alanine racemase domain protein; PRIAM: Alanine racemase; SPTR: B8D0W1 Alanine racemase; TIGRFAM: alanine racemase; PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase" /codon_start=1 /transl_table=11 /product="alanine racemase" /protein_id="YP_003828002.1" /db_xref="GI:302392182" /db_xref="GeneID:9513482" /translation="MGNEFNRPVWVEVNLENIRFNLKQIRARVSADTLVMAVVKADAY GHGAVPVARAAVEAGADRLAVGLPEEGVQLRNAGFEVPIQILGEVLPEQIPLLAKYGL IPTVSKLETAVELERINAQLESRQKIHLKVDTGMGRLGVKPDEVVGFAQKLSSFPHLE LEGLLTHFATADEADKEYTRQQWQKFNYAIECLEAAGIRIPVKHCANSAAIIDLPEME LDLVRAGIMLYGLRPSDEVGDSLQLKSVLNWKARIVYLKEVDKGCGISYGATYTTADK AEIATIPLGYADGYFRALSNKGDVLINGRRAPIRGRVCMDQFMVDVTEIPGVSVGDEV ILIGKQDDKEVTAMELADLVGTINYEIISKITKRVPRIYVN" misc_feature complement(1525449..1526552) /locus_tag="Acear_1427" /note="alanine racemase; Reviewed; Region: alr; PRK00053" /db_xref="CDD:178827" misc_feature complement(1525449..1526549) /locus_tag="Acear_1427" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase; Region: PLPDE_III_AR; cd00430" /db_xref="CDD:143481" misc_feature complement(order(1525494..1525496,1525626..1525631, 1525713..1525715,1525770..1525772,1525893..1525904, 1525947..1525952,1526070..1526072,1526157..1526159, 1526178..1526180,1526313..1526315,1526439..1526441, 1526451..1526453,1526457..1526459)) /locus_tag="Acear_1427" /note="active site" /db_xref="CDD:143481" misc_feature complement(order(1525494..1525496,1525893..1525904, 1525947..1525952,1526070..1526072,1526157..1526159, 1526313..1526315,1526439..1526441,1526451..1526453, 1526457..1526459)) /locus_tag="Acear_1427" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143481" misc_feature complement(order(1525467..1525469,1525491..1525496, 1525503..1525508,1525620..1525625,1525695..1525697, 1525713..1525715,1525728..1525730,1525767..1525775, 1525779..1525784,1525794..1525796,1525800..1525811, 1526064..1526066,1526070..1526072,1526154..1526165, 1526247..1526252,1526361..1526366,1526373..1526375, 1526448..1526453)) /locus_tag="Acear_1427" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143481" misc_feature complement(order(1525494..1525496,1525626..1525631, 1525713..1525715,1525770..1525772,1526070..1526072, 1526157..1526159,1526439..1526441,1526451..1526453)) /locus_tag="Acear_1427" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143481" misc_feature complement(order(1525770..1525772,1526451..1526453)) /locus_tag="Acear_1427" /note="catalytic residues [active]" /db_xref="CDD:143481" gene complement(1526697..1527167) /locus_tag="Acear_1428" /db_xref="GeneID:9513483" CDS complement(1526697..1527167) /locus_tag="Acear_1428" /EC_number="2.5.1.9" /note="COGs: COG0054 Riboflavin synthase beta-chain; InterPro IPR002180; KEGG: amt:Amet_1021 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; PRIAM: Riboflavin synthase; SPTR: A6TM20 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase" /codon_start=1 /transl_table=11 /product="6,7-dimethyl-8-ribityllumazine synthase" /protein_id="YP_003828003.1" /db_xref="GI:302392183" /db_xref="GeneID:9513483" /translation="MKQVFEGKLVGKGLKFGVVVGRFNEFISNKLLSGAMDALKRHDV AEEDVEVAWVPGGFEIPLIAKKMAKSGKYDAVICLGAVIRGDTPHFEYVCNEVSKGIG KVGLQEEIPVMFGVITTDTIEQAIERAGTKAGNKGWEAAVSALEMANLITEIEK" misc_feature complement(1526724..1527104) /locus_tag="Acear_1428" /note="lumazine synthase (6,7-dimethyl-8-ribityllumazine synthase, LS), catalyzes the penultimate step in the biosynthesis of riboflavin (vitamin B2); type-I; Region: Lumazine_synthase-I; cd09209" /db_xref="CDD:187742" misc_feature complement(order(1526727..1526732,1526739..1526741, 1526751..1526753,1526760..1526762,1526784..1526786, 1526796..1526798,1526808..1526810,1526814..1526816, 1526820..1526822,1526826..1526828,1526838..1526843, 1526850..1526864,1526868..1526876,1526880..1526888, 1526892..1526897,1526901..1526903,1526907..1526912, 1526916..1526918,1526949..1526951,1526961..1526963, 1526967..1526975,1526979..1526987,1526991..1526996, 1527003..1527014,1527099..1527101)) /locus_tag="Acear_1428" /note="homopentamer interface [polypeptide binding]; other site" /db_xref="CDD:187742" misc_feature complement(order(1526751..1526753,1526760..1526762, 1526784..1526786,1526817..1526831,1526898..1526903, 1526907..1526909,1526913..1526930,1526991..1527002, 1527096..1527101)) /locus_tag="Acear_1428" /note="active site" /db_xref="CDD:187742" gene complement(1527197..1528411) /locus_tag="Acear_1429" /db_xref="GeneID:9513484" CDS complement(1527197..1528411) /locus_tag="Acear_1429" /note="COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; InterPro IPR017945:IPR000422:IPR000926:IPR016299; KEGG: mta:Moth_0917 GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; SPTR: A1HMW2 GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase" /codon_start=1 /transl_table=11 /product="3,4-dihydroxy-2-butanone 4-phosphate synthase" /protein_id="YP_003828004.1" /db_xref="GI:302392184" /db_xref="GeneID:9513484" /translation="MDFEFNKIEAAIKDIKEGKMVVVVDDEDRENEGDIIMAADKVTP EAINFMAMHARGLICLPIVGTRLDKLELPQMVEHNSDSHETAFTVSIDHRDTTTGISA YERCQTVREVLNPDSKPEDFTRPGHIFPLRSRPGGVLRRAGHTEAAVDLARLAGLYPA GVICEVMSDDGTMARVPELMEFVEEHQLKIITIEDLIKYRVKRDKLVTRTAEVDMPTK HGHFKAYSYVEDNGQNCHIALVKGDIEDKEDVLVRVHSECLTGDALGSLRCDCGEQLA RALTKIEEEGAGVLLYMRQEGRGIGLSNKLKAYELQDEGKDTVEANEMLGFDADLRDY GIGAQILTDLNLSSIRLMTNNPRKIVGLEGYGLEVTERVSIEVEPNCNNEEYLRTKKE KLGHMLVDGFNK" misc_feature complement(1527218..1528408) /locus_tag="Acear_1429" /note="bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional; Region: PRK09311" /db_xref="CDD:181774" misc_feature complement(1527812..1528390) /locus_tag="Acear_1429" /note="3,4-dihydroxy-2-butanone 4-phosphate synthase; Region: DHBP_synthase; cl00336" /db_xref="CDD:185917" misc_feature complement(1527218..1527796) /locus_tag="Acear_1429" /note="GTP cyclohydrolase II (RibA). GTP cyclohydrolase II catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5' phosphate, formate, pyrophosphate (APy), and GMP in the biosynthetic pathway of riboflavin. Riboflavin is the...; Region: GTP_cyclohydro2; cd00641" /db_xref="CDD:88311" misc_feature complement(order(1527473..1527475,1527482..1527487, 1527491..1527496,1527503..1527508,1527530..1527532, 1527536..1527538,1527575..1527577,1527584..1527589, 1527608..1527610,1527614..1527628,1527632..1527637, 1527641..1527643,1527695..1527697,1527701..1527703, 1527707..1527709,1527728..1527736,1527740..1527742, 1527764..1527784)) /locus_tag="Acear_1429" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:88311" misc_feature complement(order(1527338..1527340,1527347..1527355, 1527416..1527418,1527422..1527424,1527458..1527460, 1527476..1527478,1527485..1527487,1527497..1527499, 1527518..1527529,1527590..1527592,1527599..1527601, 1527605..1527607,1527632..1527634,1527638..1527655)) /locus_tag="Acear_1429" /note="active site" /db_xref="CDD:88311" gene complement(1528434..1529087) /locus_tag="Acear_1430" /db_xref="GeneID:9513485" CDS complement(1528434..1529087) /locus_tag="Acear_1430" /EC_number="2.5.1.9" /note="COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR017938:IPR001783; KEGG: swo:Swol_1221 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: C6Q2S9 Riboflavin synthase, alpha subunit; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit" /codon_start=1 /transl_table=11 /product="riboflavin synthase, alpha subunit" /protein_id="YP_003828005.1" /db_xref="GI:302392185" /db_xref="GeneID:9513485" /translation="MFTGIVEEMGEVSSINRGSQSVELEIKADKVLEDVKIGDSIATS GVCLTVTDFGEDYFTVDVMPETMRKSSLAELQIGSKVNLERALRLQDRLGGHLVSGHI DGTGKIKKKQREDNAILVTVSLPSDLKRYLIPKGSITVDGISLTIAELEETEFIVSLI PHTAQETTLGQKSIGDTVNLEVDLIGKYVERMLNFQIESDNNQSNVDLNLLQKNGFL" misc_feature complement(1528512..1529087) /locus_tag="Acear_1430" /note="riboflavin synthase subunit alpha; Provisional; Region: PRK09289" /db_xref="CDD:181760" misc_feature complement(1528830..1529081) /locus_tag="Acear_1430" /note="Lumazine binding domain; Region: Lum_binding; pfam00677" /db_xref="CDD:144321" misc_feature complement(1528539..1528793) /locus_tag="Acear_1430" /note="Lumazine binding domain; Region: Lum_binding; pfam00677" /db_xref="CDD:144321" gene complement(1529093..1530208) /locus_tag="Acear_1431" /db_xref="GeneID:9513486" CDS complement(1529093..1530208) /locus_tag="Acear_1431" /EC_number="3.5.4.26" /EC_number="1.1.1.193" /note="COGs: COG0117 Pyrimidine deaminase; InterProIPR016193:IPR004794:IPR011549:IPR002125:IPR 002734:IPR016192; KEGG: drm:Dred_2093 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase; SPTR: A4J6A7 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal; riboflavin biosynthesis protein RibD" /codon_start=1 /transl_table=11 /product="diaminohydroxyphosphoribosylaminopyrimidine deaminase ;5-amino-6-(5-phosphoribosylamino)uracil reductase" /protein_id="YP_003828006.1" /db_xref="GI:302392186" /db_xref="GeneID:9513486" /translation="MADYNRDIDYMRLALDLAAKGRGRTSPNPMVGAVIVKDGEIVGQ GYHHAAGKPHAEVNALQDAADKTEDATVYVTLEPCSHYGKTPPCTKALIGAGVSRVVA AMKDPNPKVAGRGLQKLADAGIEVESGLLEEEAKELNEAFIKYITTERPFVILKNAMT LDGKIATKTGDSKWISGEESRRYVHRLRDEVDGILVGIGTVLSDNPRLTTRLPEQDGQ DPIRIVLDSRLEIPLDSNLVTQESEAKTVVAAAETADEEKAAKLEEAGVEVIFLPDKQ GRIDLDSLLAELGRMEIMSLLVEGGSRINTSFLFTELVDKILYFIAPKLIGGSEAVQA VGGQGVDKVADGIELGDYELSTIGNDILIVGYPDYKE" misc_feature complement(1529117..1530178) /locus_tag="Acear_1431" /note="riboflavin biosynthesis protein RibD; Region: eubact_ribD; TIGR00326" /db_xref="CDD:161819" misc_feature complement(1529840..1530178) /locus_tag="Acear_1431" /note="Riboflavin-specific deaminase. Riboflavin biosynthesis protein RibD (Diaminohydroxyphosphoribosylaminopyrimidine deaminase) catalyzes the deamination of 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate, which is an intermediate step in the...; Region: Riboflavin_deaminase-reductase; cd01284" /db_xref="CDD:29827" misc_feature complement(order(1529945..1529947,1529972..1529977, 1530041..1530049)) /locus_tag="Acear_1431" /note="catalytic motif [active]" /db_xref="CDD:29827" misc_feature complement(order(1529945..1529947,1529972..1529974, 1530041..1530043,1530047..1530049)) /locus_tag="Acear_1431" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:29827" misc_feature complement(1529108..1529761) /locus_tag="Acear_1431" /note="Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5,10-...; Region: DHFR; cl00161" /db_xref="CDD:193688" gene complement(1530805..1531452) /locus_tag="Acear_1432" /db_xref="GeneID:9513487" CDS complement(1530805..1531452) /locus_tag="Acear_1432" /EC_number="5.1.3.1" /note="COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR011060:IPR000056:IPR013785; KEGG: bwe:BcerKBAB4_3683 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Q4MJ70 Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase" /codon_start=1 /transl_table=11 /product="ribulose-phosphate 3-epimerase" /protein_id="YP_003828007.1" /db_xref="GI:302392187" /db_xref="GeneID:9513487" /translation="MVKIAPSILAADFSNLEEEIKQVSKAEYLHLDVMDGHFVPNITI GPLVVEAISDKTDQLLDAHLMIENPDQYIPDFADSGAELITVHAEACPHLHRTVQNIK EQEVKAGVALNPATPLTALDHILPELDLVLLMTVNPGFGGQKFIEDMLPKINRLRKRI EQNNLDIDIQVDGGIKPYNVDRVVEAGANVIVAGSAIFGSDDPGQAVVDLQESCK" misc_feature complement(1530823..1531446) /locus_tag="Acear_1432" /note="Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative...; Region: RPE; cd00429" /db_xref="CDD:73366" misc_feature complement(1530820..1531443) /locus_tag="Acear_1432" /note="ribulose-phosphate 3-epimerase; Region: rpe; TIGR01163" /db_xref="CDD:130231" misc_feature complement(order(1530868..1530873,1530931..1530933, 1530937..1530939,1531027..1531032,1531036..1531041, 1531258..1531260,1531357..1531359,1531426..1531428, 1531432..1531434)) /locus_tag="Acear_1432" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73366" misc_feature complement(order(1530997..1530999,1531009..1531011, 1531015..1531017,1531042..1531044,1531084..1531086, 1531096..1531098,1531102..1531104,1531111..1531113, 1531165..1531170,1531174..1531176,1531237..1531239, 1531249..1531251,1531318..1531329,1531333..1531335, 1531339..1531344,1531348..1531350,1531402..1531404, 1531411..1531413)) /locus_tag="Acear_1432" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:73366" misc_feature complement(order(1530937..1530939,1531264..1531266, 1531357..1531359,1531363..1531365)) /locus_tag="Acear_1432" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:73366" gene complement(1531446..1532333) /locus_tag="Acear_1433" /db_xref="GeneID:9513488" CDS complement(1531446..1532333) /locus_tag="Acear_1433" /note="COGs: COG1162 GTPase; InterPro IPR016027:IPR004881:IPR010914; KEGG: dae:Dtox_2303 ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; SPTR: B0MG96 Putative uncharacterized protein; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A" /codon_start=1 /transl_table=11 /product="ribosome small subunit-dependent GTPase A" /protein_id="YP_003828008.1" /db_xref="GI:302392188" /db_xref="GeneID:9513488" /translation="METGRIIKAYAGYYYVLSFERDVVYETRLRGRFRQEDIDFYVGD RVEFSIIDEDEQTGVIEELLPRSTKLDRPAVANIDQVVLVFASQQPELNYELLDRFLL LVEAYGFEILICINKVDLVGLNEAQEALADYEDIGYRVVYTSAETEHGLNRLTEELQG RLSVLAGPSGVGKSSLLNRLSPEAEMDVGKVSQKIKQGRHTTRHVELITLDNGGLVVD TPGFTSLRIDFIAERELAYFFREMREYTGQCKFNDCLHSSEPECRVKQALEEGEIPQS RYDSYLSFLSEIKGEDNQW" misc_feature complement(1531467..1532330) /locus_tag="Acear_1433" /note="GTPase RsgA; Reviewed; Region: PRK00098" /db_xref="CDD:178861" misc_feature complement(1531479..1532324) /locus_tag="Acear_1433" /note="YjeQ/EngC. YjeQ (YloQ in Bacillus subtilis) represents a protein family whose members are broadly conserved in bacteria and have been shown to be essential to the growth of E. coli and B. subtilis. Proteins of the YjeQ family contain all sequence...; Region: YjeQ_engC; cd01854" /db_xref="CDD:57925" misc_feature complement(order(1531707..1531709,1531713..1531718, 1531722..1531724,1532103..1532108,1532127..1532129, 1532199..1532210,1532307..1532309,1532313..1532315)) /locus_tag="Acear_1433" /note="GTPase/OB domain interface [polypeptide binding]; other site" /db_xref="CDD:57925" misc_feature complement(order(1531482..1531484,1531494..1531496, 1531503..1531505,1531614..1531616,1531620..1531622, 1531632..1531634,1531920..1531922,1532016..1532021, 1532028..1532033,1532037..1532042,1532049..1532054)) /locus_tag="Acear_1433" /note="GTPase/Zn-binding domain interface [polypeptide binding]; other site" /db_xref="CDD:57925" misc_feature complement(order(1531809..1531826,1531899..1531904, 1531974..1531979,1531983..1531988)) /locus_tag="Acear_1433" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:57925" misc_feature complement(1531977..1531988) /locus_tag="Acear_1433" /note="G4 box; other site" /db_xref="CDD:57925" misc_feature complement(1531896..1531904) /locus_tag="Acear_1433" /note="G5 box; other site" /db_xref="CDD:57925" misc_feature complement(1531812..1531835) /locus_tag="Acear_1433" /note="G1 box; other site" /db_xref="CDD:57925" misc_feature complement(1531716..1531739) /locus_tag="Acear_1433" /note="Switch I region; other site" /db_xref="CDD:57925" misc_feature complement(1531728..1531730) /locus_tag="Acear_1433" /note="G2 box; other site" /db_xref="CDD:57925" misc_feature complement(1531671..1531682) /locus_tag="Acear_1433" /note="G3 box; other site" /db_xref="CDD:57925" misc_feature complement(1531668..1531676) /locus_tag="Acear_1433" /note="Switch II region; other site" /db_xref="CDD:57925" gene complement(1532351..1534294) /locus_tag="Acear_1434" /db_xref="GeneID:9513489" CDS complement(1532351..1534294) /locus_tag="Acear_1434" /note="COGs: COG0515 serine/threonine protein kinase; InterProIPR011009:IPR000719:IPR005543:IPR017442:IPR 020635:IPR002290:IPR017441:IPR008271; KEGG: hor:Hore_09960 protein kinase; PFAM: serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA domain containing protein; SPTR: B8CWT3 protein kinase; PFAM: protein kinase domain; PASTA domain" /codon_start=1 /transl_table=11 /product="serine/threonine protein kinase with PASTA sensor(s)" /protein_id="YP_003828009.1" /db_xref="GI:302392189" /db_xref="GeneID:9513489" /translation="MIGGCLNNRYKIEDRIGAGGMALVYEATDKLLNRRVAVKVLRPQ FATDEEFIERFKREAQAVANFTHPNIVNIFDIGEDDGTHYIVMENVQGETLKHRIQKQ GKLDSLSALKITKQICNALVTAHRKQIIHCDIKPGNILLASEDVVKLTDFGIARAVTS SSTLKQTDTVIGSAAYFSPEQARGDKLDNRTDIYSLGIVLYEMVTGEVPFRGESPVSV ALKHIKEEPEPPTKFDNTIPAQIENIVLKAVSKKPQERYDNVKKMLVDVKAALKELEE LEKDNIDKSAAETDKEQEETIVMSKNDYPTKQLSNVTDEDYREENYIQSNKASSFCQK NRSLVIWSLVVVLIAGSLVFGYHQVISYFEVPVVEVPNLVEKDLETAKQSLQNKGLQL EIYNRSYNNDIPEEHIISQYPEAGKKVKQNRDISVAVSKGAKLIKVPGVMGKQLREAK VLIEEEDLEVGEVEYVFNDEIKKGLIVSQTPSSNKEVKVDTEVDLIISKGKEAKPVKV PNLVGLTEENAKKRLRDFDLIIGEVKYKKSLSYFEGEVMDQEPKSGAEVVPSFPINLV VSEGIRNPYGSEVHEFNIRVNINPGEEDQRVKIIVRDDNGRRIIYNQVHHPGDLVKQQ IVSVGSTVVQVYVNDRLVREQRL" misc_feature complement(1533521..1534270) /locus_tag="Acear_1434" /note="Protein Kinases, catalytic domain; Region: PKc_like; cl09925" /db_xref="CDD:195926" misc_feature complement(order(1533770..1533781,1533833..1533835, 1533842..1533844,1533875..1533877,1533881..1533886, 1533890..1533892,1533896..1533898,1534007..1534009, 1534013..1534015,1534025..1534036,1534082..1534084, 1534178..1534180,1534184..1534186,1534223..1534225, 1534235..1534249)) /locus_tag="Acear_1434" /note="active site" /db_xref="CDD:173623" misc_feature complement(order(1533842..1533844,1533875..1533877, 1533881..1533886,1533890..1533892,1533896..1533898, 1534013..1534015,1534025..1534036,1534082..1534084, 1534178..1534180,1534184..1534186,1534223..1534225, 1534235..1534249)) /locus_tag="Acear_1434" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:173623" misc_feature complement(order(1533770..1533781,1533833..1533835, 1533884..1533886,1533890..1533892,1533896..1533898, 1534007..1534009,1534013..1534015,1534235..1534237)) /locus_tag="Acear_1434" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:173623" misc_feature complement(1533524..1534225) /locus_tag="Acear_1434" /note="Serine/Threonine protein kinases, catalytic domain; Region: S_TKc; smart00220" /db_xref="CDD:128516" misc_feature complement(order(1533770..1533781,1533827..1533847)) /locus_tag="Acear_1434" /note="activation loop (A-loop); other site" /db_xref="CDD:173623" misc_feature complement(1533005..1533181) /locus_tag="Acear_1434" /note="PASTA domain of bacterial serine/threonine kinase pknB-like proteins. PknB is a member of a group of related transmembrane sensor kinases present in many gram positive bacteria, which has been shown to regulate cell shape in Mycobacterium tubercolosis...; Region: PASTA_pknB; cd06577" /db_xref="CDD:119328" misc_feature complement(1532801..1532986) /locus_tag="Acear_1434" /note="PASTA domain of bacterial serine/threonine kinase pknB-like proteins. PknB is a member of a group of related transmembrane sensor kinases present in many gram positive bacteria, which has been shown to regulate cell shape in Mycobacterium tubercolosis...; Region: PASTA_pknB; cd06577" /db_xref="CDD:119328" misc_feature complement(1532591..1532776) /locus_tag="Acear_1434" /note="PASTA domain of bacterial serine/threonine kinase pknB-like proteins. PknB is a member of a group of related transmembrane sensor kinases present in many gram positive bacteria, which has been shown to regulate cell shape in Mycobacterium tubercolosis...; Region: PASTA_pknB; cd06577" /db_xref="CDD:119328" gene complement(1534314..1535024) /locus_tag="Acear_1435" /db_xref="GeneID:9513490" CDS complement(1534314..1535024) /locus_tag="Acear_1435" /EC_number="3.1.3.16" /note="COGs: COG0631 serine/threonine protein phosphatase; InterPro IPR001932:IPR014045; KEGG: bld:BLi01797 PrpC; PFAM: protein phosphatase 2C-like; PRIAM: phosphoprotein phosphatase; SMART: protein phosphatase 2C domain protein; SPTR: C2BZG2 phosphoprotein phosphatase; PFAM: protein phosphatase 2C" /codon_start=1 /transl_table=11 /product="protein serine/threonine phosphatase" /protein_id="YP_003828010.1" /db_xref="GI:302392190" /db_xref="GeneID:9513490" /translation="MESGFKSDCGKIREQNEDNYLQTEQNGLKIFAVADGMGGHNAGE VASSIAIEMLRDHNFSFNRVPGDLIEVIEAINNQIKNKAEQNPEYQGMGTTLTAAVLS ENQVYIGHVGDSRAYLLRNREFKQLTEDHSLVNRLVKDGKITAEEAKDHPQSNVLLQA LGTESQVDIDLIELEAKTGDLFLLCSDGLNTMLSDREVKSILLEEKSLQQKADKLVQR AKEFGGYDNITINLFAVS" misc_feature complement(1534335..1535018) /locus_tag="Acear_1435" /note="Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence...; Region: PP2Cc; cd00143" /db_xref="CDD:29062" misc_feature complement(1534341..1535015) /locus_tag="Acear_1435" /note="Protein phosphatase 2C; Region: PP2C; pfam00481" /db_xref="CDD:189566" misc_feature complement(order(1534347..1534349,1534464..1534466, 1534914..1534922,1534971..1534976,1534986..1534988)) /locus_tag="Acear_1435" /note="Active site [active]" /db_xref="CDD:29062" gene complement(1535052..1536104) /locus_tag="Acear_1436" /db_xref="GeneID:9513491" CDS complement(1535052..1536104) /locus_tag="Acear_1436" /EC_number="2.1.1.-" /note="COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR004383:IPR007197; KEGG: hor:Hore_09940 radical SAM enzyme, Cfr family; PFAM: radical SAM domain protein; SPTR: B8CWT1 radical SAM enzyme, Cfr family; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family" /codon_start=1 /transl_table=11 /product="23S rRNA m(2)A-2503 methyltransferase" /protein_id="YP_003828011.1" /db_xref="GI:302392191" /db_xref="GeneID:9513491" /translation="MTDKAELISFDLTELENFINNELGEASFRAEQIFNWIYKQGAVN FEEMTNLSQGLRSRLQSKAYIQQLTEITRAKSEDGTVKFLFELEDNKEIETVFLPYQD GRNSICVSTQVGCGMGCNFCATGQQGLERNLTTGEIVSQILKVQQLMGSNGYDPSLIS NVVFMGMGEPLANYDNFLRVIDILNSEKALNISMRRITVSTCGLVPQIKRLADKELQL VLAISLHAAEDKLRSEMMPINKRYPLEELIAACEYYLQKTNRRITFEYALVDGVNNRR QDAEKLAQLLSGLLCHVNLIPVNPVKELGLTRPNRKAIKEFKEILDRHNIQATVRQER GNDIEAACGQLRTENS" misc_feature complement(1535055..1536095) /locus_tag="Acear_1436" /note="Predicted Fe-S-cluster redox enzyme [General function prediction only]; Region: COG0820" /db_xref="CDD:31162" misc_feature complement(1535067..1536095) /locus_tag="Acear_1436" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cl14056" /db_xref="CDD:197444" gene complement(1536132..1537478) /locus_tag="Acear_1437" /db_xref="GeneID:9513492" CDS complement(1536132..1537478) /locus_tag="Acear_1437" /note="COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR006027:IPR004573:IPR001678:IPR018314; KEGG: pth:PTH_1788 tRNA and rRNA cytosine-C5-methylases; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; SPTR: A5D1B7 tRNA and rRNA cytosine-C5-methylases; TIGRFAM: sun protein; PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; NOL1/NOP2/sun family RNA methylase; transcription antitermination factor NusB" /codon_start=1 /transl_table=11 /product="sun protein" /protein_id="YP_003828012.1" /db_xref="GI:302392192" /db_xref="GeneID:9513492" /translation="MTKNGRQTAVEAVYRVNEEGAYSNLILNHLFKKYNLADQDRGLA TELIYGSLRMRNHLDWILNQFADRRVNKMDKWTRNILRLGLYQIRFLDSIPDAVACNE TVELAKDYQHSGAAGFVNGILRSILRSLDEIEFPQLKSNPVQHIRYKYSFPQWMVETW VKRYGVELTVDICSAFNQIPSKIIRQNRLKVTAEELQADLASVGIETEAISEIPQAFR VTNSSSLFQSNSFTAGYFQIQGLASIIAGHIMNPQPKDIVLDLCSAPGGKTTHLAELM ANQGEIVANDLHEDKLELIERNCNRLGIRIVRTRAGDGRSLKFEKKFDRILVDAPCSG LGMIAKKPEIKWQKKPQDIDSLAELQLELLNNAGRFLKPKGELVYSTCTITHQENLEV INKFLAQNSDFELVDLSSWADKLGISSEFILEGSIQLLPTWQTNEGFFIAKLKKRV" misc_feature complement(1536138..1537478) /locus_tag="Acear_1437" /note="16S rRNA methyltransferase B; Provisional; Region: PRK14902" /db_xref="CDD:184895" misc_feature complement(1537092..1537472) /locus_tag="Acear_1437" /note="N-terminal RNA binding domain of the methyltransferase Sun. The rRNA-specific 5-methylcytidine transferase Sun, also known as RrmB or Fmu shares the RNA-binding non-catalytic domain with the transcription termination factor NusB. The precise biological...; Region: Methyltransferase_Sun; cd00620" /db_xref="CDD:29566" misc_feature complement(1537461..1537472) /locus_tag="Acear_1437" /note="putative RNA binding site [nucleotide binding]; other site" /db_xref="CDD:29566" misc_feature complement(1536141..1536929) /locus_tag="Acear_1437" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene complement(1537493..1538167) /locus_tag="Acear_1438" /db_xref="GeneID:9513493" CDS complement(1537493..1538167) /locus_tag="Acear_1438" /note="KEGG: nth:Nther_1746 hypothetical protein; SPTR: B2A5G5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828013.1" /db_xref="GI:302392193" /db_xref="GeneID:9513493" /translation="MPLLFIILLIVVLFPSLLIPVGFLMMLLVLFIPFKFTFDSLIIL LTAPGQIIKIAVNPKLRRNHALEHATINVLEESYGHQQLSGLAREDGFLIQGIINPVV LQQAAQEGLQRLKAGEQGLVIHDRCGTSLMVGNLLSALIFFGLLLSTGHFTILYVLVA VVCSRLLGPIVGRYTQRFLTTSTDVEGMVIKEIRSEAEFNNFFGISLSNQPQKLFVKT DRLEVY" gene complement(1538169..1538870) /locus_tag="Acear_1439" /db_xref="GeneID:9513494" CDS complement(1538169..1538870) /locus_tag="Acear_1439" /note="COGs: COG2738 Zn-dependent protease; InterPro IPR007395; KEGG: hor:Hore_09910 peptidase membrane zinc metallopeptidase PFAM: peptidase membrane zinc metallopeptidase SPTR: B8CWS8 peptidase membrane zinc metallopeptidase PFAM: Putative neutral zinc metallopeptidase" /codon_start=1 /transl_table=11 /product="peptidase membrane zinc metallopeptidase" /protein_id="YP_003828014.1" /db_xref="GI:302392194" /db_xref="GeneID:9513494" /translation="MFFPFFDPTFFILIPALLISMYAQYKVKSTFNKYLNVAASKGYT GAEVARDILQQKGIRDVTVERAKGSGSLNDHYDPRSKTVRLSSEVYNGRSLASLGVAA HETGHAVQHAVEYLPLNIRHTLLPAANFGSKLGLPLGIFGFFFFRSQFLVQLGLVIFA GAVLFQIVTLPVEFNASTRAIEFLRNGNYLASDEVKSTKKVLNAAALTYVAAVLVSIG HMLRLLMMASMLDDN" misc_feature complement(1538190..1538837) /locus_tag="Acear_1439" /note="Putative neutral zinc metallopeptidase; Region: Zn_peptidase_2; cl01049" /db_xref="CDD:194018" gene complement(1538885..1539658) /locus_tag="Acear_1440" /db_xref="GeneID:9513495" CDS complement(1538885..1539658) /locus_tag="Acear_1440" /note="COGs: COG1852 conserved hypothetical protein; InterPro IPR002829; KEGG: mta:Moth_0899 hypothetical protein; PFAM: protein of unknown function DUF116; SPTR: Q2RK23 Putative uncharacterized protein; PFAM: protein of unknown function DUF116" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828015.1" /db_xref="GI:302392195" /db_xref="GeneID:9513495" /translation="MKIKMQQNEENTRDRKLFLSLLVLSVMILGIIVSGIWYLNLTNF NHISRIILLVVGIIITLFSLIVVLGIVGILIILRKNEPVSFFYGPIRIVISYLFPLVI YLGKILGFDRLEIKNSFIRVNNQLVKPNRLEVAPENILMLLPHCIQQVDCEYRITNDL DNCRRCGRCPVDDILQLRDKYGIKVAVATGGTLARRIIKEVQPRAIIAVACERDLTSG IQDTYPLPVIGVVNIRPEGPCINTLVEIEKLEKAINKLL" misc_feature complement(1538897..1539370) /locus_tag="Acear_1440" /note="Protein of unknown function DUF116; Region: DUF116; cl00800" /db_xref="CDD:154005" gene complement(1539648..1540613) /locus_tag="Acear_1441" /db_xref="GeneID:9513496" CDS complement(1539648..1540613) /locus_tag="Acear_1441" /EC_number="2.1.2.9" /note="COGs: COG0223 methionyl-tRNA formyltransferase; InterProIPR002376:IPR011034:IPR005794:IPR005793:IPR 001555; KEGG: cdf:CD2584 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; SPTR: A1HMX6 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase" /codon_start=1 /transl_table=11 /product="methionyl-tRNA formyltransferase" /protein_id="YP_003828016.1" /db_xref="GI:302392196" /db_xref="GeneID:9513496" /translation="MDVIFMGTPDFAVPTLKRLIKEEFTDLIGVVTQPDRPRGRGQKL HPSPVKKEALKEDLTLLQPEDINSSDSVAKLKELNPDVIVVIAYGQVLDNEILELPKL GCINVHASLLPKYRGSGPLHRVLINGEEKTGITTIYMEEGLDTGDMILQEEVEITSEE TVGQLHDRLAVLGADVLIETLELIKSGEAERIPQDDRKATYAQKINKEEGRIDWTASA YEIKNLIRGMNPWPGAYTFYNDNRLKVWGSKIYDSKTKPSVIPGTVVDIEAESGFIVQ SGEGQLLINEVQPENKQRMSANDFLRGYDLQEGTLLATDQDQNED" misc_feature complement(1539675..1540613) /locus_tag="Acear_1441" /note="methionyl-tRNA formyltransferase; Reviewed; Region: fmt; PRK00005" /db_xref="CDD:178787" misc_feature complement(1539999..1540613) /locus_tag="Acear_1441" /note="Methionyl-tRNA formyltransferase, N-terminal hydrolase domain; Region: FMT_core_Met-tRNA-FMT_N; cd08646" /db_xref="CDD:187715" misc_feature complement(order(1540182..1540187,1540194..1540199, 1540203..1540205,1540263..1540265,1540287..1540298, 1540323..1540325,1540338..1540361,1540578..1540583, 1540593..1540595)) /locus_tag="Acear_1441" /note="putative active site [active]" /db_xref="CDD:187715" misc_feature complement(order(1540002..1540004,1540257..1540265, 1540287..1540292,1540296..1540298,1540347..1540358, 1540488..1540499,1540503..1540505,1540515..1540517, 1540581..1540583,1540587..1540592)) /locus_tag="Acear_1441" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187715" misc_feature complement(order(1540182..1540187,1540194..1540199, 1540296..1540298,1540323..1540325,1540338..1540346, 1540350..1540352,1540359..1540361)) /locus_tag="Acear_1441" /note="putative cosubstrate binding site; other site" /db_xref="CDD:187715" misc_feature complement(order(1540182..1540184,1540290..1540292, 1540296..1540298)) /locus_tag="Acear_1441" /note="catalytic site [active]" /db_xref="CDD:187715" misc_feature complement(1539723..1539992) /locus_tag="Acear_1441" /note="C-terminal domain of Formyltransferase and other enzymes; Region: Met_tRNA_FMT_C; cd08704" /db_xref="CDD:187732" misc_feature complement(order(1539729..1539731,1539735..1539740, 1539744..1539746,1539750..1539752,1539882..1539884, 1539888..1539890,1539921..1539923)) /locus_tag="Acear_1441" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187732" gene complement(1540644..1541081) /locus_tag="Acear_1442" /db_xref="GeneID:9513497" CDS complement(1540644..1541081) /locus_tag="Acear_1442" /EC_number="3.5.1.88" /note="COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: hor:Hore_09890 peptide deformylase; PFAM: formylmethionine deformylase; PRIAM: peptide deformylase; SPTR: B8CWS6 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: polypeptide deformylase; TIGRFAM: peptide deformylase" /codon_start=1 /transl_table=11 /product="peptide deformylase" /protein_id="YP_003828017.1" /db_xref="GI:302392197" /db_xref="GeneID:9513497" /translation="MAVLSIRTIGDPVLRTEAKPVDEVTEKTEGLIKNMQDTMYDASG VGLAAPQIGISKRVIVVDVGEGPLALINPEIVESSGSEIDEEGCLSIPNENGNVERAA RVVVDALDSDGREVEIEAEGLLARVLQHEIDHLEGILFVDKVE" misc_feature complement(1540662..1541066) /locus_tag="Acear_1442" /note="Polypeptide or peptide deformylase; a family of metalloenzymes that catalyzes the removal of the N-terminal formyl group in a growing polypeptide chain following translation initiation during protein synthesis in prokaryotes. These enzymes utilize Fe(...; Region: Pep_deformylase; cd00487" /db_xref="CDD:29602" misc_feature complement(order(1540680..1540682,1540689..1540694, 1540815..1540823,1540929..1540931,1540944..1540952)) /locus_tag="Acear_1442" /note="active site" /db_xref="CDD:29602" misc_feature complement(order(1540689..1540691,1540815..1540817, 1540929..1540931,1540944..1540946)) /locus_tag="Acear_1442" /note="catalytic residues [active]" /db_xref="CDD:29602" misc_feature complement(order(1540680..1540682,1540692..1540694, 1540818..1540820)) /locus_tag="Acear_1442" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:29602" gene complement(1541124..1543367) /locus_tag="Acear_1443" /db_xref="GeneID:9513498" CDS complement(1541124..1543367) /locus_tag="Acear_1443" /note="COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterProIPR005259:IPR014021:IPR001650:IPR011545:IPR 014001; KEGG: hor:Hore_09880 primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: B8CWS5 Primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: Helicase conserved C-terminal domain; type III restriction enzyme, res subunit; TIGRFAM: primosomal protein N'" /codon_start=1 /transl_table=11 /product="primosomal protein N'" /protein_id="YP_003828018.1" /db_xref="GI:302392198" /db_xref="GeneID:9513498" /translation="MEFRYAEVIVDLPINEVDKPFTYLIPDQLREEIEIGYQVKVPFG HRQLSGYVIELKEEVESDSTKLKEIIKLKSSLQLFDRELLRLAKWIADYYQTYLITVL KSVIPSGDITQKTERIVRLNYSVPEIKQELAKLSKRAYKQREVLEYLIENQDQDLTST ALAEKVNTTSGTVRRLYEKDLIRYEEMEVRRDPVADIDFEPTTPFSLTTEQQKALNQI ENLREAPESGTLLLKGVTGSGKTEVYLQAIAQVIDDGQDAIVLVPEISLTPQTVKRFK SRFGDQIAIYHSHLSNGERYDEWLRMKRGEAKVVVGARSAIFAPFSNLGLIIIDEEHE TSYKQGDHPKYQARKVANKRAELTGAVTVLGTATPALESYYQVQQGNYQSVSLENRID NRPLPPVEVIDMREELEAGHRSIFSRRLTAAIEDRLAKNEQIILFLNRRGFSTFVLCR ECGFVLECPNCDVSLTYHADKTLLRCHYCDYQRKVPDICPECESRYIKYFGAGTQKVE QAIIEEFPTARVLRMDVDTTTRKGAHQRMLDRFRNNEADILLGTQMIAKGHDFPNITL VGVITADTALNFPDFRAAEHTFQLLTQVAGRTGRGDIVGEVVVQTYDPDHYSIQLAKE HDYETFYQQEIEARKELDYPPFTHLINLIIKHEKEVKVSKVANQLGGILNQQIRDREL NVELLGPIPAPLAKLRGKYRWQMILKGRDLDMMRKLNSYSLEALKKTVNLESTVISVD VDPIKML" misc_feature complement(1541130..1543358) /locus_tag="Acear_1443" /note="primosome assembly protein PriA; Validated; Region: PRK05580" /db_xref="CDD:180144" misc_feature complement(1542261..1542680) /locus_tag="Acear_1443" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature complement(1542645..1542659) /locus_tag="Acear_1443" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature complement(1542369..1542380) /locus_tag="Acear_1443" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature complement(1541568..1541795) /locus_tag="Acear_1443" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cl14882" /db_xref="CDD:197446" gene complement(1543495..1544682) /locus_tag="Acear_1444" /db_xref="GeneID:9513499" CDS complement(1543495..1544682) /locus_tag="Acear_1444" /EC_number="2.5.1.6" /note="COGs: COG0192 S-adenosylmethionine synthetase; InterPro IPR002133; KEGG: chy:CHY_0138 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: methionine adenosyltransferase; SPTR: Q3AFS4 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase" /codon_start=1 /transl_table=11 /product="methionine adenosyltransferase" /protein_id="YP_003828019.1" /db_xref="GI:302392199" /db_xref="GeneID:9513499" /translation="MANKNYLFTSESVTEGHPDKVADQISDAVLDAILSQDPQGRVAC ETLVTTGMVLVSGEISTDCYVDISQIARETVKEIGYTRAKFGFDGETCAVLTSIDEQS PDIAMGVDEALEAKEGSTGDQELGAGDQGLMFGYATNETEELMPLPIVLSHKLARRLA KVRKDNLLSYLRPDGKTQVTVEYEEDKPVRVDTVVVSTQHGPDVSLDQIKEDIISEVI KPVIDEEMLDDKTEYLVNPTGRFVIGGPHGDAGLTGRKIIVDTYGGTARHGGGAFSGK DPTKVDRSATYAARYVAKNVVAAGLADRCEVQLSYAIGVASPVSIMVDTFGTANIEEE ALEELITEYFDLRPSRIIEELNLRRPIYNQVAAYGHLGRNDLELPWERTDKADLLRDE AGL" misc_feature complement(1543498..1544673) /locus_tag="Acear_1444" /note="S-adenosylmethionine synthetase; Validated; Region: PRK05250" /db_xref="CDD:179974" misc_feature complement(1544374..1544667) /locus_tag="Acear_1444" /note="S-adenosylmethionine synthetase, N-terminal domain; Region: S-AdoMet_synt_N; pfam00438" /db_xref="CDD:189548" misc_feature complement(1543960..1544313) /locus_tag="Acear_1444" /note="S-adenosylmethionine synthetase, central domain; Region: S-AdoMet_synt_M; pfam02772" /db_xref="CDD:190418" misc_feature complement(1543537..1543956) /locus_tag="Acear_1444" /note="S-adenosylmethionine synthetase, C-terminal domain; Region: S-AdoMet_synt_C; pfam02773" /db_xref="CDD:111646" gene complement(1544924..1545721) /locus_tag="Acear_1445" /db_xref="GeneID:9513500" CDS complement(1544924..1545721) /locus_tag="Acear_1445" /note="COGs: COG1101 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: hor:Hore_19970 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8CZM5 ABC transporter related; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003828020.1" /db_xref="GI:302392200" /db_xref="GeneID:9513500" /translation="MLKVSGVRKVFGQGTVNENIALRDVDLELDAGEFVTVIGSNGAG KSTLLNSIAGTFPINKGSIEVNGIELTGEPDYKRAGLIGRVFQDPLEGTAASMSIEEN LAMAADRGKRRGLSIGVDSERRDEFKEYLSLLGLGLEDRLTDKVGLLSGGQRQSLTLL MATIAKPKVLLLDEHTAALDPKTAEQVIDLTNKIVGKHNLTVLMVTHDLTQALDMGTR TIMMDTGEIVLDIKGSARSHMTVEELLDKFAQAQGKELTNDRMLLAQ" misc_feature complement(1544933..1545721) /locus_tag="Acear_1445" /note="ABC-type uncharacterized transport system, ATPase component [General function prediction only]; Region: PhnK; COG1101" /db_xref="CDD:31298" misc_feature complement(1545032..1545718) /locus_tag="Acear_1445" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(1545584..1545607) /locus_tag="Acear_1445" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature complement(order(1545101..1545103,1545200..1545205, 1545461..1545463,1545581..1545589,1545593..1545598)) /locus_tag="Acear_1445" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature complement(1545461..1545472) /locus_tag="Acear_1445" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature complement(1545248..1545277) /locus_tag="Acear_1445" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature complement(1545200..1545217) /locus_tag="Acear_1445" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature complement(1545182..1545193) /locus_tag="Acear_1445" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature complement(1545095..1545115) /locus_tag="Acear_1445" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene complement(1545738..1546634) /locus_tag="Acear_1446" /db_xref="GeneID:9513501" CDS complement(1545738..1546634) /locus_tag="Acear_1446" /note="COGs: COG4120 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: hor:Hore_19980 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: B8CZM6 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component" /codon_start=1 /transl_table=11 /product="inner-membrane translocator" /protein_id="YP_003828021.1" /db_xref="GI:302392201" /db_xref="GeneID:9513501" /translation="MIMWGTLLSSIEQGLVYGIMALGVYLTFRILDFPDLTVDGSFPL GAAVTAKLIISGVDPIISTLIAVLIGAVAGMITGFLNTKLKIVGLLSGILTMTALYSI NLRIMGKANIPLLNQETVLTKIEALGFAGLWQTGIFFLIVIILLKLLIDWFLHTELGL ALRATGDNQQMIRSLGVNTDLMIILGLALSNSLVALAGSLVAQYQGFADVGMGIGMII IGLASVIIGEVVFSTRKIFWATLSVIGGSIVYRLAITTALRLGFAPTDLKIVTSVLVI LALAAPTLKEDLKLSLLSDTSS" misc_feature complement(1545798..1546595) /locus_tag="Acear_1446" /note="Transmembrane subunit (TM) of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which are involved in the uptake of branched-chain amino acids (AAs), as well as TMs of transporters involved in the uptake of...; Region: TM_PBP1_branched-chain-AA_like; cd06574" /db_xref="CDD:119320" misc_feature complement(1546071..1546127) /locus_tag="Acear_1446" /note="TM-ABC transporter signature motif; other site" /db_xref="CDD:119320" gene complement(1546655..1547650) /locus_tag="Acear_1447" /db_xref="GeneID:9513502" CDS complement(1546655..1547650) /locus_tag="Acear_1447" /note="COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: hor:Hore_19990 ABC-type uncharacterized transport system, periplasmic component; PFAM: protein of unknown function DUF534; SPTR: B8CZM7 ABC-type uncharacterized transport system, periplasmic component; PFAM: ABC transporter substrate binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828022.1" /db_xref="GI:302392202" /db_xref="GeneID:9513502" /translation="MDLINRKLVLGLLILGLIIITVGCGQSQTGNEADKKLKIGVIQI VEHPALDAARKGFVDSLAEQGYKEGEDVDYDYQNAQGDMSTAQTIAKNFKNNQVDMIL AIATPTAQAAANATSEIPILITAVTDPKEAGLVNSLDKPGTNVTGTSDLTPVGKQLEL LVEISPEVKDVGILYNAGETNSVVQADLAKEKADELGLNLVEGAVSNSSDVFQTTQTL AGKVDAFYVPTDNTVASAVESVVKVANENDLPLIVGEEEVVERGGLATIGINYYQLGQ QTGSMAAEVIAGADPAQMPIEYLEGAELVINKEAAKEMNVDLPDDIVNRAANIIK" misc_feature complement(1546658..1547566) /locus_tag="Acear_1447" /note="ABC-type uncharacterized transport system, periplasmic component [General function prediction only]; Region: COG2984" /db_xref="CDD:32803" misc_feature complement(1546697..1547539) /locus_tag="Acear_1447" /note="Type I periplasmic ligand-binding domain of uncharacterized ABC-type transport systems that are predicted to be involved in the uptake of amino acids, peptides, or inorganic ions; Region: PBP1_ABC_uncharacterized_transporter; cd06325" /db_xref="CDD:107320" misc_feature complement(order(1546904..1546906,1546994..1546996, 1547426..1547428,1547432..1547434)) /locus_tag="Acear_1447" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:107320" misc_feature complement(order(1546886..1546888,1546961..1546963, 1547108..1547110,1547270..1547278,1547330..1547338)) /locus_tag="Acear_1447" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:107320" gene complement(1547963..1548409) /locus_tag="Acear_1448" /db_xref="GeneID:9513503" CDS complement(1547963..1548409) /locus_tag="Acear_1448" /EC_number="4.4.1.21" /note="COGs: COG1854 LuxS protein involved in autoinducer AI2 synthesis; InterPro IPR011249:IPR003815; KEGG: cbh:CLC_0781 S-ribosylhomocysteinase; PFAM: LuxS protein; PRIAM: S-ribosylhomocysteine lyase; SPTR: A7FRY3 S-ribosylhomocysteinase LuxS; PFAM: S-Ribosylhomocysteinase (LuxS)" /codon_start=1 /transl_table=11 /product="quorum-sensing autoinducer 2 (AI-2), LuxS" /protein_id="YP_003828023.1" /db_xref="GI:302392203" /db_xref="GeneID:9513503" /translation="MEIEVESFNLDHTQVDAPYVREAGRIETPQGDLIQKYDLRLLQP NENAVPTGAMHTLEHLLAGYMRERIDNVVDVAPMGCRTGFYLIVVGSPELDEIEEAVV DSLQEVIKTEMEDVPATTARECGNYRDHSLFGAKEYAEEVLAGFKE" misc_feature complement(1547978..1548397) /locus_tag="Acear_1448" /note="S-Ribosylhomocysteinase (LuxS); Region: LuxS; cl00802" /db_xref="CDD:186195" gene complement(1548399..1549631) /locus_tag="Acear_1449" /db_xref="GeneID:9513504" CDS complement(1548399..1549631) /locus_tag="Acear_1449" /EC_number="4.1.1.36" /EC_number="6.3.2.5" /note="COGs: COG0452 phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR007085:IPR003382:IPR005252; KEGG: hor:Hore_09830 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; PRIAM: phosphopantothenate--cysteine ligase; SPTR: A1HMY1 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic" /codon_start=1 /transl_table=11 /product="phosphopantothenoylcysteine decarboxylase ;phosphopantothenate-cysteine ligase" /protein_id="YP_003828024.1" /db_xref="GI:302392204" /db_xref="GeneID:9513504" /translation="MPNEEKKLKNKSILLGVTGGIAAYKALEIVSSLKKLGAEVDVIM TESATEFVQPLSFRSLSHNPVIVDMFTEPKQWNVKHISLAEKADLCLIAPATANIIGK VANGIADDMLSTTVMATNAPVLLAPAMNCNMYDNPILQQNLTKLKELDYQLIEPDAGY LACGTEGKGRLPAPDEIVNELIKRLTKGLELTDQRILITAGGTQEPIDPVRFIGNHSS GKMGYTVAKEAARRGAEVTLVTAPTALQTPVGVESIQVQTAQQMYERVMELQAEQDII IKAAAVADYRPQKIAENKIKKDDSDLVIKLERNPDILAELGNRKEEKLLVGFAAESED LIANAEEKLERKNLDLILANDITADDAGFGTDTNRGIIISRTDREELPTLPKEEVASR LLDRITNLLERRGEQNGD" misc_feature complement(1548429..1549613) /locus_tag="Acear_1449" /note="bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated; Region: PRK05579" /db_xref="CDD:180143" misc_feature complement(1549071..1549601) /locus_tag="Acear_1449" /note="Flavoprotein; Region: Flavoprotein; cl08021" /db_xref="CDD:195652" misc_feature complement(1548471..1549052) /locus_tag="Acear_1449" /note="DNA / pantothenate metabolism flavoprotein; Region: DFP; cl04410" /db_xref="CDD:186628" gene complement(1549652..1549855) /locus_tag="Acear_1450" /db_xref="GeneID:9513505" CDS complement(1549652..1549855) /locus_tag="Acear_1450" /note="InterPro IPR006110:IPR003716; KEGG: hor:Hore_09820 DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; SPTR: A1HMY2 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase, omega subunit" /protein_id="YP_003828025.1" /db_xref="GI:302392205" /db_xref="GeneID:9513505" /translation="MLAYPPIGELLEKSGAKEYTLVIEAAKRARELNDEDPVVDCKTK KPVSNALEEVLAGRLKHKSVDEE" misc_feature complement(1549655..1549849) /locus_tag="Acear_1450" /note="RNA polymerase Rpb6; Region: RNA_pol_Rpb6; cl14651" /db_xref="CDD:189264" gene complement(1549882..1550460) /locus_tag="Acear_1451" /db_xref="GeneID:9513506" CDS complement(1549882..1550460) /locus_tag="Acear_1451" /EC_number="2.7.4.8" /note="COGs: COG0194 Guanylate kinase; InterPro IPR017665:IPR008144:IPR008145:IPR020590; KEGG: hor:Hore_09810 guanylate kinase; PFAM: guanylate kinase; PRIAM: Guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; SPTR: B8CWR8 Guanylate kinase; TIGRFAM: guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: guanylate kinase" /codon_start=1 /transl_table=11 /product="guanylate kinase" /protein_id="YP_003828026.1" /db_xref="GI:302392206" /db_xref="GeneID:9513506" /translation="MLKSEEGKLIILSGPSAVGKGTVITALMDEYQDISYSVSVTTRQ PRVDEEDGVDYFFVSETEFKEMIDNDEFIEWAKVHENYYGTPKKCVEDTLASGQDVIL EIDIQGAAQVKKSYQQGVFIFLAPPSLEELEARIQKRGTDSQKAIEVRMENATEEMER AENYDYIVVNDEVEEAVEKVKSVIIAERCKVD" misc_feature complement(1550080..1550436) /locus_tag="Acear_1451" /note="Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to guanosine monophosphate (GMP) to yield adenosine diphosphate (ADP) and...; Region: GMPK; cd00071" /db_xref="CDD:73180" misc_feature complement(order(1550212..1550214,1550227..1550229, 1550296..1550298,1550323..1550325,1550332..1550334, 1550353..1550355,1550401..1550403,1550419..1550421)) /locus_tag="Acear_1451" /note="catalytic site [active]" /db_xref="CDD:73180" misc_feature complement(order(1550401..1550403,1550419..1550421)) /locus_tag="Acear_1451" /note="G-X2-G-X-G-K; other site" /db_xref="CDD:73180" gene complement(1550476..1550721) /locus_tag="Acear_1452" /db_xref="GeneID:9513507" CDS complement(1550476..1550721) /locus_tag="Acear_1452" /note="COGs: COG2052 conserved hypothetical protein; InterPro IPR007169; KEGG: cbt:CLH_1161 protein YlzA; PFAM: protein of unknown function DUF370; SPTR: C5UXW3 protein YlzA; PFAM: Domain of unknown function (DUF370)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828027.1" /db_xref="GI:302392207" /db_xref="GeneID:9513507" /translation="MGIKLINIGFGNIAAANRIIAIVSPESAPIKRIIQEARDRGMLV DATYGRRTRAVVITDSDHVILSAVQPETVSQRIDDEE" misc_feature complement(1550479..1550721) /locus_tag="Acear_1452" /note="Domain of unknown function (DUF370); Region: DUF370; cl00898" /db_xref="CDD:186245" gene complement(1550744..1551628) /locus_tag="Acear_1453" /db_xref="GeneID:9513508" CDS complement(1550744..1551628) /locus_tag="Acear_1453" /note="COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR005229:IPR013527:IPR013551; KEGG: cth:Cthe_1317 hypothetical protein; PFAM: YicC domain protein; domain of unknown function DUF1732; SPTR: A3DF20 Putative uncharacterized protein; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: conserved hypothetical protein TIGR00255" /codon_start=1 /transl_table=11 /product="YicC domain protein" /protein_id="YP_003828028.1" /db_xref="GI:302392208" /db_xref="GeneID:9513508" /translation="MLRSMTGYSQAQVEIEGYEIIVEIKSVNHKYQKIYLHIPDHFSP LEPKLKEIIKSRVGRGKVNYNLEIKNKEEAEVKVSINQTTATEYIDSLKRLKDKFDLT GELNINLLTQFDDILEVEEIKQNVEGLWPEIKEATKEALVDFIEMREKEGNKLLADLA ARAESIESLIEKIEDRIPEMVDKYKAKLEDRLEELLTDAEVNEERLANEVVIMADKSD VTEELVRLKSHIEQFEETLELDVAEPVGRKLDFIAQEMHREINTVGSKINDSEISNYV IDLKSEVDKIREQVRNVE" misc_feature complement(1550747..1551628) /locus_tag="Acear_1453" /note="hypothetical protein; Provisional; Region: PRK11820" /db_xref="CDD:183325" misc_feature complement(1551155..1551625) /locus_tag="Acear_1453" /note="YicC-like family, N-terminal region; Region: YicC_N; pfam03755" /db_xref="CDD:146410" misc_feature complement(1550747..1551010) /locus_tag="Acear_1453" /note="Domain of unknown function (DUF1732); Region: DUF1732; pfam08340" /db_xref="CDD:149411" gene complement(1551796..1552518) /locus_tag="Acear_1454" /db_xref="GeneID:9513509" CDS complement(1551796..1552518) /locus_tag="Acear_1454" /EC_number="3.6.1.31" /EC_number="3.5.4.19" /note="COGs: COG0139 phosphoribosyl-AMP cyclohydrolase; InterPro IPR008179:IPR002496; KEGG: dae:Dtox_0758 phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; SPTR: C1TDK3 phosphoribosyl-ATP pyrophosphatase; phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase" /codon_start=1 /transl_table=11 /product="phosphoribosyl-AMP cyclohydrolase ;phosphoribosyl-ATP pyrophosphatase" /protein_id="YP_003828029.1" /db_xref="GI:302392209" /db_xref="GeneID:9513509" /translation="MNYLDELDFNDDDLIPAIVQDIETDEVLMMAYMNQEAVTKTVKT GYTWFWSRSRQKLWKKGESSGHLQQVEEIKLDCDGDTLLVKVRQTGGACHTGYYSCFY RQLNSSKKFEATGRKVFDPDEVYGEKVSDDSEEKTENQLVPKGSLPQILQEVYQVVLD RKENPVEDSYTCYLFDEGLDKILKKVGEEATEVVIASKNGDEEEIVAEIADLLYHLLV LLNYHEINLNQVYDELASRFEK" misc_feature complement(1551805..1552518) /locus_tag="Acear_1454" /note="bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; Reviewed; Region: PRK02759" /db_xref="CDD:179470" misc_feature complement(1552141..1552518) /locus_tag="Acear_1454" /note="Phosphoribosyl-AMP cyclohydrolase; Region: PRA-CH; cl00344" /db_xref="CDD:193779" misc_feature complement(1551799..1552074) /locus_tag="Acear_1454" /note="MazG nucleotide pyrophosphohydrolase domain; Region: MazG; cl00345" /db_xref="CDD:193780" gene complement(1552515..1553276) /locus_tag="Acear_1455" /db_xref="GeneID:9513510" CDS complement(1552515..1553276) /locus_tag="Acear_1455" /EC_number="4.1.3.-" /note="COGs: COG0107 Imidazoleglycerol-phosphate synthase; InterPro IPR011060:IPR004651:IPR006062:IPR013785; KEGG: aae:aq_181 imidazole glycerol phosphate synthase subunit HisF; PFAM: histidine biosynthesis protein; SPTR: C1SM21 Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase subunit hisF" /protein_id="YP_003828030.1" /db_xref="GI:302392210" /db_xref="GeneID:9513510" /translation="MLAKRIIPCLDVDEGRVVKGVNFVGLRDAGDPVELAAFYDQAGA DELVFLDITASAEKRETMVEVVKRTSEEVFIPFTIGGGIRTIADMRRLLKAGADKISI NSAAVKNPDLIAEGAKKFGSQCIVVAIDAKRKEDDSGWEVYIHGGRKATGLDAVEWAT RVEELGAGEILLTSMDSDGTKDGYDNELNAAVSSRLNIPVIASGGAGDPEDILNAFTE GKADAALAASIFHFEEYSITEVKEYLQQEEVVVRI" misc_feature complement(1552518..1553276) /locus_tag="Acear_1455" /note="Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism]; Region: HisF; COG0107" /db_xref="CDD:30456" misc_feature complement(1552536..1553267) /locus_tag="Acear_1455" /note="The cyclase subunit of imidazoleglycerol phosphate synthase (HisF). Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-; Region: HisF; cd04731" /db_xref="CDD:73393" misc_feature complement(order(1552593..1552598,1552662..1552670, 1552740..1552745,1552758..1552760,1552839..1552841, 1552887..1552889,1552893..1552895,1552965..1552970, 1553031..1553033,1553127..1553129,1553220..1553222)) /locus_tag="Acear_1455" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73393" misc_feature complement(order(1552611..1552613,1552686..1552688, 1552770..1552772,1552908..1552910,1552980..1552985, 1552992..1552994,1553049..1553051,1553055..1553057, 1553064..1553066,1553076..1553078,1553142..1553144, 1553157..1553159)) /locus_tag="Acear_1455" /note="glutamase interaction surface [polypeptide binding]; other site" /db_xref="CDD:73393" gene complement(1553295..1554026) /locus_tag="Acear_1456" /db_xref="GeneID:9513511" CDS complement(1553295..1554026) /locus_tag="Acear_1456" /EC_number="5.3.1.16" /note="COGs: COG0106 phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; InterPro IPR011060:IPR006063:IPR006062:IPR013785; KEGG: syp:SYNPCC7002_A1890 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR: A3ISI1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase" /codon_start=1 /transl_table=11 /product="1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase" /protein_id="YP_003828031.1" /db_xref="GI:302392211" /db_xref="GeneID:9513511" /translation="MEVIPAIDIKDGECVRLYKGDFDQKTVYGQPLEMAELWAAKGAT RLHIVDLDGALDGKPKNLDLISEIVNRVELPLQVGGGIRDLATIENYLDIGVERVIIG TAAVENPDLVVRAIDNFGSDRIVIGIDAKDGYVATEGWLETSDTTAVDLGKAMQQKGV KRVVFTDISKDGTLTGPNIENTKELACKTELKVIASGGVSQLADIEAIAELEEFGVEG VITGKALYSKDLDLEEAIELVDDQD" misc_feature complement(1553316..1554023) /locus_tag="Acear_1456" /note="HisA. Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-...; Region: HisA; cd04732" /db_xref="CDD:73394" misc_feature complement(1553325..1554020) /locus_tag="Acear_1456" /note="phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Region: TIGR00007" /db_xref="CDD:161661" misc_feature complement(order(1553640..1553642,1553886..1553888, 1554003..1554005)) /locus_tag="Acear_1456" /note="catalytic residues [active]" /db_xref="CDD:73394" gene complement(1554026..1554634) /locus_tag="Acear_1457" /db_xref="GeneID:9513512" CDS complement(1554026..1554634) /locus_tag="Acear_1457" /EC_number="2.4.2.-" /note="COGs: COG0118 glutamine amidotransferase; InterPro IPR010139:IPR017926:IPR000991:IPR016226; KEGG: gur:Gura_4055 imidazole glycerol phosphate synthase subunit HisH; PFAM: glutamine amidotransferase class-I; SPTR: A5G8T1 Imidazole glycerol phosphate synthase subunit hisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase subunit hisH" /protein_id="YP_003828032.1" /db_xref="GI:302392212" /db_xref="GeneID:9513512" /translation="MIRIIDYGMGNLRSVQKGFEKMGFAAEITSDPAEIAKADGVVLP GVGAFGDAMDNLREAGLIGVINDVIEQGMPFLGICLGLHLLFSTSEEWGQQKGLDIIP GKVVKFPAELDKKIPHMGWNQLELEKETELFKDLESGFFQYFVHSYYVVPEDESVIAT TTEYGMEFVSSIQQDNVYAVQYHPEKSSKQGLKILKNFGELI" misc_feature complement(1554029..1554634) /locus_tag="Acear_1457" /note="imidazole glycerol phosphate synthase subunit HisH; Provisional; Region: hisH; PRK13141" /db_xref="CDD:183868" misc_feature complement(1554041..1554631) /locus_tag="Acear_1457" /note="Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS); Region: GATase1_IGP_Synthase; cd01748" /db_xref="CDD:153219" misc_feature complement(order(1554080..1554082,1554086..1554088, 1554392..1554406,1554494..1554517)) /locus_tag="Acear_1457" /note="putative active site [active]" /db_xref="CDD:153219" misc_feature complement(1554494..1554517) /locus_tag="Acear_1457" /note="oxyanion strand; other site" /db_xref="CDD:153219" misc_feature complement(order(1554080..1554082,1554086..1554088, 1554398..1554400)) /locus_tag="Acear_1457" /note="catalytic triad [active]" /db_xref="CDD:153219" gene complement(1554655..1555242) /locus_tag="Acear_1458" /db_xref="GeneID:9513513" CDS complement(1554655..1555242) /locus_tag="Acear_1458" /EC_number="4.2.1.19" /note="COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; InterPro IPR020568:IPR000807:IPR020565; KEGG: cth:Cthe_2884 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: C7HI03 Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase" /codon_start=1 /transl_table=11 /product="imidazoleglycerol-phosphate dehydratase" /protein_id="YP_003828033.1" /db_xref="GI:302392213" /db_xref="GeneID:9513513" /translation="MREAEIKRRTSETEIELRLNLDGDGSSKVDTGVPFLDHMLELFS KHGLFNLELTADGDLEIDAHHTVEDIGICLGRAINKSIGDKAGIKRYGTEYVPMDEAL VSVSLDLSGRSYLAYGLELKRDRVGEFDTELVVEFMRAVVQNGGLNLHLRQLAGENTH HIIEAAFKAFGRALCEAVEEDKRITGVMSTKDKLE" misc_feature complement(1554661..1555233) /locus_tag="Acear_1458" /note="Imidazoleglycerol-phosphate dehydratase; Region: IGPD; cd07914" /db_xref="CDD:153419" misc_feature complement(order(1554751..1554753,1554760..1554765, 1554835..1554837,1554907..1554909,1554946..1554951, 1554973..1554975,1555039..1555041,1555048..1555053, 1555105..1555110,1555117..1555119,1555129..1555131, 1555207..1555209)) /locus_tag="Acear_1458" /note="putative active site pocket [active]" /db_xref="CDD:153419" misc_feature complement(order(1554760..1554774,1554835..1554840, 1554847..1554849,1554853..1554855,1554862..1554876, 1555048..1555053,1555057..1555065,1555129..1555131, 1555138..1555143)) /locus_tag="Acear_1458" /note="4-fold oligomerization interface [polypeptide binding]; other site" /db_xref="CDD:153419" misc_feature complement(order(1554751..1554753,1554760..1554765, 1554835..1554837,1555039..1555041,1555048..1555053, 1555129..1555131)) /locus_tag="Acear_1458" /note="metal binding residues [ion binding]; metal-binding site" /db_xref="CDD:153419" misc_feature complement(order(1554700..1554702,1554718..1554720, 1554727..1554729,1554781..1554783,1554787..1554789, 1554793..1554795,1554799..1554801,1554901..1554903, 1554907..1554909,1554919..1554927,1554937..1554942, 1554946..1554954,1554958..1554966,1554970..1554972, 1554976..1554978)) /locus_tag="Acear_1458" /note="3-fold/trimer interface [polypeptide binding]; other site" /db_xref="CDD:153419" gene complement(1555263..1556558) /locus_tag="Acear_1459" /db_xref="GeneID:9513514" CDS complement(1555263..1556558) /locus_tag="Acear_1459" /EC_number="1.1.1.23" /note="COGs: COG0141 Histidinol dehydrogenase; InterPro IPR016161:IPR012131:IPR001692; KEGG: tte:TTE2138 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; PRIAM: Histidinol dehydrogenase; SPTR: C5RDD3 Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase" /codon_start=1 /transl_table=11 /product="histidinol dehydrogenase" /protein_id="YP_003828034.1" /db_xref="GI:302392214" /db_xref="GeneID:9513514" /translation="MIKLINTNEAEVDDKLEDILTRSSFDDPEKMETVEEVLNDIQAN GDEAVLKYTAKFDGVEFSPEEMLVTEEEIKAAYKQVDDEFLAALETAIENIEDFHRRQ KRESWMNVDDDGVVLGQVIRPLESVGLYVPGGTAAYPSSVLMNGIPAKVAEVDEVIMV SPPDESGEMNPYTLVAADKIDIDKIYKVGGAQAVGAIAFGTEAVPKVDKIVGPGNIYV TLAKKLAYGYVDIDMLAGPSEVLVLADNTAVPKHVAADLLSQAEHDPMASSVLVTDSK ELAEAVQVELKKQLAELSRQEIATQALEDYGAIILTDDLTEAIEITNRFAPEHLEVAV DKPFELVGKLKNAGAIFLGHNTAEPLGDYIAGPNHVLPTGGSARFYSSLNLDDFIKKS SILSYSKEGLAKVKDKAIKLAEVEGLDAHANSVRVRFED" misc_feature complement(1555266..1556495) /locus_tag="Acear_1459" /note="Histidinol dehydrogenase [Amino acid transport and metabolism]; Region: HisD; COG0141" /db_xref="CDD:30490" misc_feature complement(1555296..1556468) /locus_tag="Acear_1459" /note="E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-...; Region: Histidinol_dh; cd06572" /db_xref="CDD:119329" misc_feature complement(order(1555770..1555772,1555905..1555910, 1555914..1555922,1555983..1555985,1555989..1555994, 1556073..1556075,1556136..1556138,1556160..1556165, 1556169..1556171,1556391..1556393)) /locus_tag="Acear_1459" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:119329" misc_feature complement(order(1555296..1555316,1555320..1555325, 1555368..1555391,1555398..1555403,1555407..1555421, 1555425..1555430,1555458..1555460,1555464..1555466, 1555470..1555484,1555488..1555493,1555497..1555499, 1555503..1555529,1555533..1555538,1555545..1555547, 1555560..1555562,1555770..1555775,1555779..1555787, 1555791..1555796,1555803..1555808,1555878..1555880, 1555890..1555892,1555935..1555937,1556139..1556153, 1556187..1556189,1556193..1556195,1556202..1556216, 1556226..1556228,1556232..1556234,1556253..1556258, 1556265..1556270,1556277..1556282,1556289..1556291, 1556295..1556300,1556307..1556312)) /locus_tag="Acear_1459" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:119329" misc_feature complement(order(1555296..1555298,1555305..1555307, 1555311..1555313,1555452..1555454,1555470..1555475, 1555485..1555487,1555572..1555577,1555770..1555772, 1555845..1555847,1556139..1556141,1556145..1556147)) /locus_tag="Acear_1459" /note="product binding site; other site" /db_xref="CDD:119329" misc_feature complement(order(1555296..1555298,1555305..1555307, 1555311..1555313,1555452..1555454,1555470..1555475, 1555485..1555487,1555572..1555577,1555770..1555772, 1555779..1555781,1555845..1555847,1556139..1556141)) /locus_tag="Acear_1459" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119329" misc_feature complement(order(1555296..1555298,1555473..1555475, 1555770..1555772,1555779..1555781)) /locus_tag="Acear_1459" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:119329" misc_feature complement(1555572..1555577) /locus_tag="Acear_1459" /note="catalytic residues [active]" /db_xref="CDD:119329" gene complement(1556542..1557198) /locus_tag="Acear_1460" /db_xref="GeneID:9513515" CDS complement(1556542..1557198) /locus_tag="Acear_1460" /EC_number="2.4.2.17" /note="COGs: COG0040 ATP phosphoribosyltransferase; InterPro IPR013820:IPR018198; KEGG: hor:Hore_02190 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; PRIAM: ATP phosphoribosyltransferase; SPTR: B8D111 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="ATP phosphoribosyltransferase catalytic subunit" /protein_id="YP_003828035.1" /db_xref="GI:302392215" /db_xref="GeneID:9513515" /translation="MPLKIALPKGRLFDPVVDILQEAGVVNKDLDDDSRKLILSGQNG DFEFILSKAVDVPTYVEYGAADIGVSGKDVLLESGKKVCEVVDLGLGCCRLVVAVPKD LGITTLEELPAKARVATKYPQTAERFFNQHGIQVETIKLNGSIEMAPAVDLAEMIVDI TSTGTTLRKNNLVEIAEVAKSSARLIINRVSYKTHYGEIKNIVQRIERSLNSKDDQIN " misc_feature complement(1556560..1557198) /locus_tag="Acear_1460" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(1557217..1558479) /locus_tag="Acear_1461" /db_xref="GeneID:9513516" CDS complement(1557217..1558479) /locus_tag="Acear_1461" /EC_number="6.1.1.21" /note="COGs: COG0124 Histidyl-tRNA synthetase; InterProIPR015807:IPR004517:IPR006195:IPR002314:IPR 004516; KEGG: hmo:HM1_3053 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); PRIAM: Histidine--tRNA ligase; SPTR: B0TDN5 Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase 2; histidyl-tRNA synthetase; PFAM: tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; ATP phosphoribosyltransferase, regulatory subunit" /codon_start=1 /transl_table=11 /product="histidyl-tRNA synthetase 2" /protein_id="YP_003828036.1" /db_xref="GI:302392216" /db_xref="GeneID:9513516" /translation="MESELNFTKMQTPDGTKDYLPEEAKKKKYLEREIDSIFARWGYE EVITPAIEFFAALSIGTGSELQQKMYKLFDRKGHILALRPEMTAPIARLVANRLKEAP RPLRLSYQANVFKYEAPQAGRQREFYQAGIELIGAKEQLADAEIAAIAVEVLQQVGLK NFSLDIGQIDYFIGLMEEADLTTEMKKKIRSKLNQKDFVGLERLVKETDLTARQRKAL LTLPDLRGGREIIDRARELVDNQQSKSALDNLEKIYKNLELLGVADCINLDLNIIRGF NYYTGMVFEGYTQDLGFTICGGGRYDNLLEQFGAASPATGFAVGIDRLLIALENQGVE LPIEEERIFLLYEEDKKEAAINLAKDLRADDKKVALEIIDRDLASSIDYASKSDWSRL VYLGSKELIKDRDYELDTLCGQEVIRLK" misc_feature complement(1557322..1558449) /locus_tag="Acear_1461" /note="ATP phosphoribosyltransferase regulatory subunit; Provisional; Region: hisZ; PRK12292" /db_xref="CDD:183410" misc_feature complement(1557493..1558413) /locus_tag="Acear_1461" /note="Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain. HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent...; Region: HisRS-like_core; cd00773" /db_xref="CDD:73226" misc_feature complement(order(1557529..1557534,1557583..1557585, 1558036..1558038,1558045..1558047,1558057..1558059, 1558081..1558083,1558102..1558107,1558189..1558194, 1558201..1558206,1558219..1558221,1558225..1558227, 1558261..1558266,1558327..1558347,1558360..1558362, 1558396..1558398)) /locus_tag="Acear_1461" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73226" misc_feature complement(1558327..1558353) /locus_tag="Acear_1461" /note="motif 1; other site" /db_xref="CDD:73226" misc_feature complement(order(1557511..1557513,1557520..1557522, 1557529..1557531,1557583..1557585,1557598..1557600, 1557643..1557648,1557652..1557654,1557658..1557660, 1558081..1558083,1558093..1558095,1558099..1558101, 1558108..1558110,1558129..1558131,1558135..1558137, 1558219..1558221,1558225..1558227)) /locus_tag="Acear_1461" /note="active site" /db_xref="CDD:73226" misc_feature complement(1558126..1558140) /locus_tag="Acear_1461" /note="motif 2; other site" /db_xref="CDD:73226" misc_feature complement(order(1557511..1557513,1557520..1557534)) /locus_tag="Acear_1461" /note="motif 3; other site" /db_xref="CDD:73226" gene complement(1558609..1559196) /locus_tag="Acear_1462" /db_xref="GeneID:9513517" CDS complement(1558609..1559196) /locus_tag="Acear_1462" /note="COGs: COG3773 Cell wall hydrolyses involved in spore germination; InterPro IPR011105; KEGG: hor:Hore_11760 cell wall hydrolase SleB; PFAM: cell wall hydrolase SleB; SPTR: B8CXA7 Cell wall hydrolase SleB; PFAM: Cell Wall Hydrolase" /codon_start=1 /transl_table=11 /product="cell wall hydrolase SleB" /protein_id="YP_003828037.1" /db_xref="GI:302392217" /db_xref="GeneID:9513517" /translation="MTNKTGFSLKVVALTLIFTLLISYITVLLPLCQDNVAHASGLDI KVSSDDISKGLALILLFTVVREALEEDVNAENISDSNQGLLARIIHAEARGEPYRGQV AVGAVVLNRVRSSQFPDTIQEVVYQEGQFTSVENGQINLNPNKTAYRAAKEALSGRDP SKDALYFYNPDKARTLWWLSTRETTVEIGNHVFAE" misc_feature complement(1558612..1558917) /locus_tag="Acear_1462" /note="Cell Wall Hydrolase; Region: Hydrolase_2; pfam07486" /db_xref="CDD:191754" gene complement(1559224..1559637) /locus_tag="Acear_1463" /db_xref="GeneID:9513518" CDS complement(1559224..1559637) /locus_tag="Acear_1463" /EC_number="2.7.4.6" /note="COGs: COG0105 Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: afu:AF0767 nucleoside diphosphate kinase (ndk); PFAM: nucleoside diphosphate kinase; PRIAM: Nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase; SPTR: O29491 Nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase" /codon_start=1 /transl_table=11 /product="nucleoside diphosphate kinase" /protein_id="YP_003828038.1" /db_xref="GI:302392218" /db_xref="GeneID:9513518" /translation="MEQTFFMIKPDGTRRNLVGEIISRIEKKGLEIKAMKMMQISNRL AKKHYAEHIDKPFFSDLKEFITSGPVVAMVVEGPGAIKIVRRMMGQTDPAESTPGSIR GDYALSIDRNVVHGSDSPESAEREIDLFFSEDEII" misc_feature complement(1559245..1559634) /locus_tag="Acear_1463" /note="Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside...; Region: NDPk_I; cd04413" /db_xref="CDD:58528" misc_feature complement(order(1559260..1559262,1559284..1559289, 1559293..1559295,1559302..1559304,1559332..1559334, 1559365..1559367,1559383..1559385,1559467..1559469, 1559491..1559493,1559611..1559613)) /locus_tag="Acear_1463" /note="active site" /db_xref="CDD:58528" misc_feature complement(order(1559527..1559535,1559560..1559562, 1559569..1559571,1559578..1559586,1559599..1559601)) /locus_tag="Acear_1463" /note="multimer interface [polypeptide binding]; other site" /db_xref="CDD:58528" gene complement(1559666..1560334) /locus_tag="Acear_1464" /db_xref="GeneID:9513519" CDS complement(1559666..1560334) /locus_tag="Acear_1464" /note="InterPro IPR001119; KEGG: hor:Hore_11770 S-layer domain protein; PFAM: S-layer domain protein; SPTR: B8CXA8 S-layer domain protein; PFAM: S-layer homology domain" /codon_start=1 /transl_table=11 /product="S-layer domain protein" /protein_id="YP_003828039.1" /db_xref="GI:302392219" /db_xref="GeneID:9513519" /translation="MKKIVSIGLIVSLLLVFTLPVFGQEKIEDVPKDHWAYQSVKELV DRGFMSLHEDNTFNGQEEVTRYQLAKVVAEILATIDQGQVKGSKEDAATLRELSTEFR SELVEINKKTDIFDKKLDKLAKQDKVAEEDRIKTKEELMAVRKEVDKIITDIEEYEAT QHSLKSRLTTLESKNRNLRNRVSVLEDELSETKDENEELKSKSKNQMLVGGGLLLLVL AAGS" misc_feature complement(1560128..1560250) /locus_tag="Acear_1464" /note="S-layer homology domain; Region: SLH; pfam00395" /db_xref="CDD:189531" misc_feature complement(<1559729..>1560157) /locus_tag="Acear_1464" /note="chromosome segregation protein SMC, primarily archaeal type; Region: SMC_prok_A; TIGR02169" /db_xref="CDD:162740" gene complement(1560367..1562352) /locus_tag="Acear_1465" /db_xref="GeneID:9513520" CDS complement(1560367..1562352) /locus_tag="Acear_1465" /note="InterPro IPR008965:IPR002102; KEGG: hor:Hore_11780 hypothetical protein; PFAM: cellulosome anchoring protein cohesin region; SPTR: B8CXA9 Putative uncharacterized protein; PFAM: Cohesin domain" /codon_start=1 /transl_table=11 /product="cellulosome anchoring protein cohesin region" /protein_id="YP_003828040.1" /db_xref="GI:302392220" /db_xref="GeneID:9513520" /translation="MKSRLMVIIVIISFILLSANALAAVDEHGNLQIKNDYISIVVNQ DQKNASRFAVDVTGGDPMHDNDDGKPLIYGRPKPWTSYTTIKVDDTNYVFGGKTDKRA GKLGKYGKQVKAPYITEQGAIETVYKYGDITVIQSLSFVKSNTTGLPDTAQIKYKVKN SGDKLHKIGLRIMLDTMLGNNDGAPFRIGSNALKTDKMYTKDKLPIFWQAFDKLDDAQ VIAQGTVKGNQVTAPDKLYVADWGSLADGVWSFDYNPGEEFMRKGEFQLDSALALFWE PKSLPPGESTTYVTNYGLGGITTVPGLLSLGVSSPAEVVLDKQNKSFPVVAYIQNTAE IEAKEVATELNLPEGLTLAGDEAKEKSLGNLKPGSTSQVVWQVEPKEEAKQELEYSVD VTAENTDDNSVSRSVTVIGPPKLKLSLSGPKKLELENRMLEPNPFEVTAKVANRGAST AYDPTVSIILPPGLKLADGEKKIKYLGYLEPEEEVDVPWMVESVGMEGELPYAVEMEA INTENESGMEFLHVPKLEPAAYLQTDNQDIKVGDYLKVRFKVANIEKLYKVAAELKYN QNRLDLIYASRGTLFVQNNELLSWEQDLNRNKGTISLTGNTRKEEDVLSDTVGILYFK VKRSGSANISFKDLLITDESGQEINYDQERLSFIIDN" misc_feature complement(1560406..1560753) /locus_tag="Acear_1465" /note="Type II cohesin domain, interaction partner of dockerin; Region: Type_II_cohesin; cd08547" /db_xref="CDD:176099" misc_feature complement(order(1560412..1560414,1560418..1560420, 1560430..1560432,1560529..1560537,1560547..1560549, 1560574..1560576,1560598..1560600,1560673..1560678)) /locus_tag="Acear_1465" /note="dockerin binding interface; other site" /db_xref="CDD:176099" gene complement(1562382..1563509) /locus_tag="Acear_1466" /db_xref="GeneID:9513521" CDS complement(1562382..1563509) /locus_tag="Acear_1466" /note="COGs: COG5271 AAA ATPase containing von Willebrand factor type A (vWA) domain; InterPro IPR006260:IPR003538; KEGG: Gm2129; predicted gene 2129; PFAM: Gram-negative tonB protein; SPTR: Q9DGL1 Retinitis pigmentosa GTPase regulator-like protein (Fragment); TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain" /codon_start=1 /transl_table=11 /product="TonB family protein" /protein_id="YP_003828041.1" /db_xref="GI:302392221" /db_xref="GeneID:9513521" /translation="MKRYILISLLLHILILSLSPNFYEAKPAFKTYPLRQQGVIEFSD LDKSDSNTVNRVEGVEKEEPKDEVEDQEDNKNEDEKKDKRNNEDEPKEDNESKGNNES KGNNESKENINKGSKEETDTVSEEPEQQEPEEQKSEEIESEETKPEEVEPEEPNKKEV EPEEVEPKEPEKAEESQEKTASNSEDAGKLEDDSTPEAASDVLDSKQGEETVEVKEDK TEDSKSENEKSEGNKETEKSKDKTAEAEKDSQDKDKAAASDGEQQKSGAEETEGQEQP KEKTPQMMVAKKKMPVYPKNAVNQGVEGRVALKVEVEATGEVKNVIILESSGDSNLDG VAKLTVQRGWEFDTAGSSYVIFLDVVFTSGEVEIKFNRLDL" misc_feature complement(1562397..1562639) /locus_tag="Acear_1466" /note="Gram-negative bacterial tonB protein; Region: TonB; cl10048" /db_xref="CDD:195954" gene complement(1563534..1563944) /locus_tag="Acear_1467" /db_xref="GeneID:9513522" CDS complement(1563534..1563944) /locus_tag="Acear_1467" /note="COGs: COG0848 biopolymer transport protein; InterPro IPR003400; KEGG: hor:Hore_11800 biopolymer transport protein ExbD/TolR; PFAM: biopolymer transport protein ExbD/TolR; SPTR: B8CXB1 biopolymer transport protein ExbD/TolR; PFAM: biopolymer transport protein ExbD/TolR" /codon_start=1 /transl_table=11 /product="biopolymer transport protein ExbD/TolR" /protein_id="YP_003828042.1" /db_xref="GI:302392222" /db_xref="GeneID:9513522" /translation="MFQRNNKSRTKIKILPMIDVLFFLLVFFMLFTTFRTTPAGLDID LPQAETVTEQKQEQLMVNVSANGQIYVDDQLLTKTDLKNEVATVIEQNPKAVVIIKAD RAVAYDEVVEVMDIARQVGASKLALAADNKVDQK" misc_feature complement(1563549..1563932) /locus_tag="Acear_1467" /note="Biopolymer transport protein ExbD/TolR; Region: ExbD; cl00537" /db_xref="CDD:193858" gene complement(1563925..1564590) /locus_tag="Acear_1468" /db_xref="GeneID:9513523" CDS complement(1563925..1564590) /locus_tag="Acear_1468" /note="COGs: COG0811 biopolymer transport protein; InterPro IPR002898; KEGG: hor:Hore_11810 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: B8CXB2 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel family" /codon_start=1 /transl_table=11 /product="MotA/TolQ/ExbB proton channel" /protein_id="YP_003828043.1" /db_xref="GI:302392223" /db_xref="GeneID:9513523" /translation="MLNFVFKGGPTIIPLLICSILSVAIILERYFYFRSINNNDFRLV KRVKLLLSDGKLSKAKKEAEKTNGPIAAMVLAGLEKYRHDRQTVKEFIQARGQHEIRV MEKRLRVLDFIASVSPLLGLLGTVIGIIKSFDILAGAQGMAAPSALSSGIAEALISTA IGLIVAIPTMLFYTYLDSKVEAKMTEMQQWSTRLIEMLAEDPSSNCSSSTARGESYVS KKQ" misc_feature complement(1563988..1564590) /locus_tag="Acear_1468" /note="Biopolymer transport proteins [Intracellular trafficking and secretion]; Region: TolQ; COG0811" /db_xref="CDD:31153" misc_feature complement(1563997..1564584) /locus_tag="Acear_1468" /note="MotA/TolQ/ExbB proton channel family; Region: MotA_ExbB; cl00568" /db_xref="CDD:186086" gene complement(1564712..1565578) /locus_tag="Acear_1469" /db_xref="GeneID:9513524" CDS complement(1564712..1565578) /locus_tag="Acear_1469" /note="COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR016195:IPR004013:IPR003141; KEGG: hor:Hore_11830 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: B8CXB4 PHP domain protein; PFAM: PHP domain" /codon_start=1 /transl_table=11 /product="PHP domain protein" /protein_id="YP_003828044.1" /db_xref="GI:302392224" /db_xref="GeneID:9513524" /translation="MTVDLHLHTTASDGSFTPSEVVNKAVQLGLDVIAITDHDTVGGI PEAKAEAFDKDLEVISGIELNTELFDLEIHILGYYIDDNNLALQNELKKLRTARYDRI EKMIKKLGDRGIEIDFDYVCQLAGDNNLSRVHLAQAIVERGYVYQISEAFDEYIGKGC SSYVSRYKLTPRRAIELIKAAGGIPVLAHPALLERDELISEFITDGLVGIEVYHSEHS QSDVRHYKHLAQKYDLVITGGSDCHGAYKDNVLLGSVEVPDKVVRDLKQNQREGGSGL ACSSLNQNFNYL" misc_feature complement(1564850..1565578) /locus_tag="Acear_1469" /note="Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only]; Region: COG0613" /db_xref="CDD:30958" misc_feature complement(1565378..1565569) /locus_tag="Acear_1469" /note="DNA polymerase alpha chain like domain; Region: POLIIIAc; smart00481" /db_xref="CDD:128757" gene complement(1565667..1566197) /locus_tag="Acear_1470" /db_xref="GeneID:9513525" CDS complement(1565667..1566197) /locus_tag="Acear_1470" /note="COGs: COG0700 membrane protein; InterPro IPR011642; KEGG: hor:Hore_11840 nucleoside recognition domain protein; PFAM: nucleoside recognition domain protein; SPTR: B8CXB5 Nucleoside recognition domain protein; PFAM: Nucleoside recognition" /codon_start=1 /transl_table=11 /product="nucleoside recognition domain protein" /protein_id="YP_003828045.1" /db_xref="GI:302392225" /db_xref="GeneID:9513525" /translation="MIDFLKCLSEWAIPIIILVIVGYAYYKGVEVYEVFTEGAVEGFN TVIKIIPYLVAMLMAISIFRASGALEILLDLLQPLLNLLGVPREIVTLGLVRPLSGTG SLGIVTELIQQHGPDSFIGRLASTIQGSTETTFYVVAVYFGAVGIKNTRYAIIAGLIA DLAGFLAAIYITKLVF" misc_feature complement(1565742..1566152) /locus_tag="Acear_1470" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" gene complement(1566220..1566798) /locus_tag="Acear_1471" /db_xref="GeneID:9513526" CDS complement(1566220..1566798) /locus_tag="Acear_1471" /note="COGs: COG2715 Uncharacterized membrane protein required for spore maturation in B.subtilis.; InterPro IPR011642; KEGG: hor:Hore_11850 nucleoside recognition domain protein; PFAM: nucleoside recognition domain protein; SPTR: B8CXB6 Nucleoside recognition domain protein; PFAM: Nucleoside recognition" /codon_start=1 /transl_table=11 /product="nucleoside recognition domain protein" /protein_id="YP_003828046.1" /db_xref="GI:302392226" /db_xref="GeneID:9513526" /translation="MINHIWFGLIILGVITGMMTGNLDQVSKAVLQTTEEGVMMLIKL VGPMSLWLGIMKLAEESNFVDLLAKIIRPITQRLFPKLPANHPALGAIMLNISANMLG LGNSATPLGIKAMQRLQDLNNKPDTATDTMCTFLVVNTSSVTLIPATIISLRTAAGSS APLEIVGTTIFATTCSTIVGIIADRILRRIWL" misc_feature complement(1566223..1566798) /locus_tag="Acear_1471" /note="Uncharacterized membrane protein, required for spore maturation in B.subtilis. [General function prediction only]; Region: SpmA; COG2715" /db_xref="CDD:32608" gene complement(1566922..1567182) /locus_tag="Acear_1472" /db_xref="GeneID:9513527" CDS complement(1566922..1567182) /locus_tag="Acear_1472" /note="COGs: COG2359 conserved hypothetical protein; InterPro IPR007347; KEGG: cbf:CLI_2458 stage V sporulation protein S; PFAM: Stage V sporulation protein S; SPTR: C3L0A0 Stage V sporulation protein S; PFAM: Stage V sporulation protein S (SpoVS)" /codon_start=1 /transl_table=11 /product="Stage V sporulation protein S" /protein_id="YP_003828047.1" /db_xref="GI:302392227" /db_xref="GeneID:9513527" /translation="MEVLKVSSDSSPNSVAGALAGVLRERGAAELQAIGAGAINQGIK AVAIARGFVAPSGLDLICIPAFTDIEIDGEERTAIKLIVEPR" misc_feature complement(1566925..1567182) /locus_tag="Acear_1472" /note="Stage V sporulation protein S (SpoVS); Region: SpoVS; cl01005" /db_xref="CDD:154140" gene complement(1567329..1568111) /locus_tag="Acear_1473" /db_xref="GeneID:9513528" CDS complement(1567329..1568111) /locus_tag="Acear_1473" /note="COGs: COG1692 conserved hypothetical protein; InterPro IPR005235:IPR004843; KEGG: chy:CHY_1170 Ser/Thr protein phosphatase family protein; PFAM: metallophosphoesterase; SPTR: Q3ACW9 Ser/Thr protein phosphatase family protein; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: conserved hypothetical protein TIGR00282" /codon_start=1 /transl_table=11 /product="metallophosphoesterase" /protein_id="YP_003828048.1" /db_xref="GI:302392228" /db_xref="GeneID:9513528" /translation="MKLLFIGDIVGRAGRRAVRELMPAIKEEEEIDFVIANGENAAGG FGITNKVAEELYGYGIDVLTMGNHTWDNKEIFDFIDDDSNLIRPYNYPPGTPGRGYGV YEVESGIKIGVVNLLGRIFMDNVDCPFRSLEELLPDIEADFTIVDFHAEATAEKIGLG RYFDGEVAAVLGTHTHVQTADEKVLSEGTAYITDLGLTGGVESILGMKEEEPLKKLTT QLPQRFSVATGDTQLTGVIVELDLETGLAESITRVREVHLNQ" misc_feature complement(1567578..1568111) /locus_tag="Acear_1473" /note="Calcineurin-like phosphoesterase; Region: Metallophos; pfam00149" /db_xref="CDD:189420" misc_feature complement(1567347..1568108) /locus_tag="Acear_1473" /note="Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain; Region: MPP_DR1281; cd07382" /db_xref="CDD:163625" misc_feature complement(order(1567584..1567586,1567590..1567592, 1567665..1567667,1567908..1567913,1567992..1567997, 1568082..1568084,1568088..1568090)) /locus_tag="Acear_1473" /note="putative active site [active]" /db_xref="CDD:163625" misc_feature complement(order(1567584..1567586,1567590..1567592, 1567665..1567667,1567911..1567913,1567992..1567997, 1568088..1568090)) /locus_tag="Acear_1473" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163625" misc_feature complement(order(1567350..1567352,1567356..1567358, 1567461..1567466,1567473..1567475,1567485..1567487, 1567497..1567505,1567533..1567535,1567563..1567565, 1567569..1567583,1567587..1567589,1567626..1567631, 1567638..1567643,1567647..1567655,1567659..1567661, 1567713..1567715,1567722..1567727,1567731..1567733, 1567749..1567751,1567755..1567757)) /locus_tag="Acear_1473" /note="homodimer binding site [polypeptide binding]; other site" /db_xref="CDD:163625" gene complement(1568246..1569781) /locus_tag="Acear_1474" /db_xref="GeneID:9513529" CDS complement(1568246..1569781) /locus_tag="Acear_1474" /EC_number="3.1.4.16" /note="COGs: COG1418 HD superfamily hydrolase; InterProIPR017705:IPR006675:IPR004088:IPR018111:IPR 006674:IPR004087:IPR003607; KEGG: hor:Hore_11870 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; PRIAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; SMART: metal-dependent phosphohydrolase HD region; KH domain protein; SPTR: B8CXB8 Metal dependent phosphohydrolase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG" /codon_start=1 /transl_table=11 /product="metal dependent phosphohydrolase" /protein_id="YP_003828049.1" /db_xref="GI:302392229" /db_xref="GeneID:9513529" /translation="MSIMLIYIVISLVIGVGVGYLVRRYIAESKIESAEKRAEQIVDD AEREADSKKREILLEAKEKAHEIKEDVENECRERRNELQRLEKRLVKKEETLENKMEN VEQREEELNRKEKEIREKKKEIDKLHEKHVKELEELSGLTTEEAKDLLLQRVEDEVEH ESARMIKEIESQAREEADKRAREVISTAIQRCAADHVAETTVSVVSLPNDEMKGRIIG REGRNIRALENLTGIDLIIDDTPEAVILSGFDPIRREIARIALEKLIADGRIHPARIE EMVEKAEEEIDSRIYEEGEQATFDTGVHGLDNEVIKLLGRLKYRTSYGQNVLQHSIEV AHLAEVMAAELGVDAKLAKRAGLLHDLGKAVDRDMEGPHVKIGADLAEKFGESPEVIH AISAHHGDIEAESVEAVLVAAADAVSAARPGARRETLESYIKRLENLENLADSFDGVE TAYAIQAGREVRIMVEPDKISDNKASKLAYDVSKQVEQELEYPGQIKVTVVRETREVE YAN" misc_feature complement(1568252..1569703) /locus_tag="Acear_1474" /note="phosphodiesterase; Provisional; Region: PRK12704" /db_xref="CDD:183692" misc_feature complement(1568582..1568815) /locus_tag="Acear_1474" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" gene complement(1569907..1570563) /locus_tag="Acear_1475" /db_xref="GeneID:9513530" CDS complement(1569907..1570563) /locus_tag="Acear_1475" /note="KEGG: cth:Cthe_1092 hypothetical protein; SPTR: A3DEE5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828050.1" /db_xref="GI:302392230" /db_xref="GeneID:9513530" /translation="MQVEGIINNLEKDIDKKKEEYNLRKGQYDQLVDEKQERQTRIEK LEDKVDIFEETRILLQETAEYARRQAKQQIENLVTKALQYIFGAEFSFEIEIEEKRGR PSAEFYVVSEYQDRKLKNNPQMARGGGIVDVVSLALRIAILESYRPKVAGPLVLDEPA KHVSEEYISNVAQFLKYVNQHFSRQVIIVTHKSHLSQIGDKSFRVELIEGVSEVTTEF " misc_feature complement(1569946..>1570545) /locus_tag="Acear_1475" /note="ATPase involved in DNA repair [DNA replication, recombination, and repair]; Region: RecN; COG0497" /db_xref="CDD:30843" misc_feature complement(1569946..>1570182) /locus_tag="Acear_1475" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(1570159..1570182) /locus_tag="Acear_1475" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature complement(1570090..1570107) /locus_tag="Acear_1475" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature complement(1570072..1570083) /locus_tag="Acear_1475" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature complement(1569985..1570005) /locus_tag="Acear_1475" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene complement(1570575..1570823) /locus_tag="Acear_1476" /db_xref="GeneID:9513531" CDS complement(1570575..1570823) /locus_tag="Acear_1476" /note="KEGG: cth:Cthe_0943 hypothetical protein; SPTR: A3DDZ8 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828051.1" /db_xref="GI:302392231" /db_xref="GeneID:9513531" /translation="MSDFAEEIKKLKSDLDQAKNKRYKYEARMEELKKQRQKLMDKLD KCGVEPEELDDEIEELEDKLQELIAEAKELLPQDILNE" gene complement(1570816..1572273) /locus_tag="Acear_1477" /db_xref="GeneID:9513532" CDS complement(1570816..1572273) /locus_tag="Acear_1477" /note="COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: cth:Cthe_0944 SMC protein-like protein; PFAM: SMC domain protein; SPTR: A3DDZ9 SMC protein-like protein" /codon_start=1 /transl_table=11 /product="SMC domain protein" /protein_id="YP_003828052.1" /db_xref="GI:302392232" /db_xref="GeneID:9513532" /translation="MIEEIRIENFQSHKDTVLKLADGLNLITGPSDSGKTAVIRALRW VLYNEPLGDDFIRVGARRCRVGILLTNGYRVIRERSKKENRYLVVEPDGSQEIYTGFG TKVPAEVKDLHQMAKVALDNDLETTLNLDYQLIGPFLLNDSGSTKAKAIGQLTGVHVI DAAIKDIARDLRRTKDSMKQETSEVERINEKLLDYQDLPQLKEEINKESKLLSEIKEV YAKLQEYQSLKEQRDDLTEEERELNKVLNKLAHLKKVESLYQQIDKYNKERINLEELQ QDWQQLTAALKKADKLLKKLSKLDKIEKNYQQSVQFLQKREKLIELQQKLQKSTAELE ASKKILEQTDKLEQAEEALTQVLKLKEDLSTLNDIKQDLIEVDKELSKKQKALSKLPK IEKSQQLISQIGEVKERLDKLKELKEEQEENQKNLHTGQKCITEVNQRLESRLEDYKA KLRELNRCPVCFNRIETDTLEQIIDNYSVGGVESE" misc_feature complement(<1571107..1572270) /locus_tag="Acear_1477" /note="chromosome segregation protein; Provisional; Region: PRK03918" /db_xref="CDD:179675" misc_feature complement(<1572136..1572270) /locus_tag="Acear_1477" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(1572166..1572189) /locus_tag="Acear_1477" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature complement(order(1572163..1572171,1572175..1572180)) /locus_tag="Acear_1477" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" gene complement(1572299..1573276) /locus_tag="Acear_1478" /db_xref="GeneID:9513533" CDS complement(1572299..1573276) /locus_tag="Acear_1478" /note="COGs: COG0420 DNA repair exonuclease; InterPro IPR004843; KEGG: cth:Cthe_0945 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: A3DE00 Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase" /codon_start=1 /transl_table=11 /product="metallophosphoesterase" /protein_id="YP_003828053.1" /db_xref="GI:302392233" /db_xref="GeneID:9513533" /translation="MKILVLTDTHIRGTTPQNRIDDFSAALKEKLLEIKEIVKQKEVD FILHGGDLFDRPDTAPSVVSDFIQLLRDFEVPIYIVAGNHDLYGHNPTTLPRTMLGLL DASGIVEVLNFGEERIIESDGIRLQLQGSPYYYDLDSSDEPDKYLLEKRPDVDYAVNL VHGFLLPQPLGIDIDYTLIDDIRATEADITITGHYHTGFGIEEMADQQYCLNPGSIVR VGAYPSELNRIPQVAVVELTSEGMDIRLHQLDTAKSGEEVLDRSQIELNEYRNQKLAD FTQSIKGAGKFNFLEVKEILDELADNKDLKMEVKKEARDRIAKAEEDLA" misc_feature complement(1572689..1573276) /locus_tag="Acear_1478" /note="Calcineurin-like phosphoesterase; Region: Metallophos; pfam00149" /db_xref="CDD:189420" misc_feature complement(1572623..1573273) /locus_tag="Acear_1478" /note="Mre11 nuclease, N-terminal metallophosphatase domain; Region: MPP_Mre11_N; cd00840" /db_xref="CDD:163616" misc_feature complement(order(1572689..1572697,1572791..1572793, 1573025..1573030,1573124..1573126,1573247..1573249, 1573253..1573255)) /locus_tag="Acear_1478" /note="active site" /db_xref="CDD:163616" misc_feature complement(order(1572689..1572691,1572695..1572697, 1572791..1572793,1573028..1573030,1573124..1573126, 1573247..1573249,1573253..1573255)) /locus_tag="Acear_1478" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163616" misc_feature complement(order(1572875..1572877,1573010..1573015, 1573019..1573021,1573115..1573117,1573223..1573243)) /locus_tag="Acear_1478" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:163616" gene complement(1573407..1574456) /locus_tag="Acear_1479" /db_xref="GeneID:9513534" CDS complement(1573407..1574456) /locus_tag="Acear_1479" /note="COGs: COG0468 RecA/RadA recombinase; InterProIPR013765:IPR020588:IPR020587:IPR003593:IPR 020584:IPR001553; KEGG: hor:Hore_11890 RecA protein; PFAM: RecA domain protein; SMART: AAA ATPase; SPTR: B8CXC0 protein recA; TIGRFAM: recA protein; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA" /codon_start=1 /transl_table=11 /product="RecA protein" /protein_id="YP_003828054.1" /db_xref="GI:302392234" /db_xref="GeneID:9513534" /translation="MKEEKEEALKRTLKQIEKEHGKGSIMRLGEANTLDVEAIPTGAL SLDVALGVGGIPRGRIVEVFGPEASGKTTVALHMIAETQKMDGVAAFIDAEHALDPKY AKNLGVDIDELLISQPNTGEEALEICESLVRSGAIDIVVVDSVAALVPEAEIEGEMGD SHVGLQARLMSQAMRKLSGTISKSKTTCIFINQIREKVGVRFGNPETTPGGRALKFYS SVRLDIRRRKAIKDGDEFLGNKTRVKVVKNKVAPPFKTAEFDIMYGTGISKTGCILDM AVDHDIVERSGAWYSYGDDVTLGQGRANSKEALEENPELLAEIEKKVKQELGMIDQEE VEAEDTENETEEKEE" misc_feature complement(1573464..1574456) /locus_tag="Acear_1479" /note="recombinase A; Provisional; Region: recA; PRK09354" /db_xref="CDD:181793" misc_feature complement(1573470..1574447) /locus_tag="Acear_1479" /note="RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange; Region: recA; cd00983" /db_xref="CDD:29984" misc_feature complement(order(1573524..1573526,1573665..1573667, 1573809..1573811,1573821..1573823,1574124..1574129, 1574142..1574162,1574166..1574171,1574376..1574390, 1574400..1574402,1574409..1574414,1574418..1574423)) /locus_tag="Acear_1479" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:29984" misc_feature complement(1574241..1574264) /locus_tag="Acear_1479" /note="Walker A motif; other site" /db_xref="CDD:29984" misc_feature complement(order(1573665..1573676,1573740..1573742, 1573779..1573781,1573878..1573880,1574028..1574030, 1574151..1574153,1574160..1574162,1574172..1574174, 1574238..1574258)) /locus_tag="Acear_1479" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29984" misc_feature complement(1574028..1574042) /locus_tag="Acear_1479" /note="Walker B motif; other site" /db_xref="CDD:29984" gene complement(1574658..1575944) /locus_tag="Acear_1480" /db_xref="GeneID:9513535" CDS complement(1574658..1575944) /locus_tag="Acear_1480" /note="COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: amt:Amet_3891 hypothetical protein; PFAM: protein of unknown function DUF2088; SPTR: A1HP90 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828055.1" /db_xref="GI:302392235" /db_xref="GeneID:9513535" /translation="MIKSYNLPYGEEKLTFQFPDEIEMQSIKPNKISVIEDYEAEFRS ILNDPIGSPPLKDIVSQGETVVIIVSDITRSAYKTDRYLPVLVDELNQIGVPDEDITI VISTGTHRSHTAEEDEVVVGSEVYNRVKVENHDATAEDLVYLGESSRGTEIAVNRTVY EADRIILTGGIVYHLLAGFGGGRKSIMPGICGYDSIQQNHSLALKDIDSSGVNPQVKT GVLDGNPVAEDMFEIAEKVNPDFMINVVVNDNKEYLAMVAGDLNKAFKRGCKMVEQAF GIPVETKSDLVISSCGGYPKDIQLYQSVKGLNNAGYAVRDDGVIILCSKCSDGGGPDN FMKWFDYSGVDNLREALKEDFTIAGFVALRAVSIASKANVILISDLADEVIENAGMIP AQTPKEAYQKAEEILNGVETVTLMPQGSLTFPLIEE" misc_feature complement(1574664..1575929) /locus_tag="Acear_1480" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3875" /db_xref="CDD:33664" misc_feature complement(1575333..1575920) /locus_tag="Acear_1480" /note="Domain of unknown function (DUF2088); Region: DUF2088; pfam09861" /db_xref="CDD:150523" gene complement(1576077..1577474) /locus_tag="Acear_1481" /db_xref="GeneID:9513536" CDS complement(1576077..1577474) /locus_tag="Acear_1481" /note="InterPro IPR004843; KEGG: nth:Nther_1472 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: C0GDM6 Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase" /codon_start=1 /transl_table=11 /product="metallophosphoesterase" /protein_id="YP_003828056.1" /db_xref="GI:302392236" /db_xref="GeneID:9513536" /translation="MKQEIIILILIAILTTVVAVNLMSSTIYRLSAFEVEIETKISAD TVTEINFPPVGKLIADTHFIPLSLKIDVLNINPDRLEKLLNNISDKEEFIAGIKVKAS EIIQLFILRTLLIAFGGGVVGVIILGSRDWIRLFAGGLVGLILLSVLFTGLYFTYDVD RLSDPNYQGMLSAAPWMISLIEEGLNNIDKLGTEMEVITSNISNLFNEVEALRGLGEV EGGTKVLHVSDIHNNPVALDFIEKAVKSFEVDLIIDSGDISDYGTPVEAKLFERIEKL DLPYVFVPGNHDSPTIVEKMAEFDNVIILDEDTVTVSGLTIAGIGDPAAVTKEIKPPE SEMVSIYQQKLEELVTEQPAEPDLLATHNFLIASGFVGRVPVLLHGHDHQFEVKQQQG TTIIDAGTTGAAGIRGLQSKKEIPYTVALLHFSNPQPEVALEAVDIIKIYSRTSGFIL ERKGIGPQQEQTSSE" misc_feature complement(<1576368..1576814) /locus_tag="Acear_1481" /note="metallophosphatase superfamily, metallophosphatase domain; Region: MPP_superfamily; cl13995" /db_xref="CDD:196777" misc_feature complement(1576320..1576808) /locus_tag="Acear_1481" /note="Calcineurin-like phosphoesterase; Region: Metallophos; pfam00149" /db_xref="CDD:189420" misc_feature complement(order(1576422..1576424,1576614..1576619, 1576704..1576706,1576782..1576784,1576788..1576790)) /locus_tag="Acear_1481" /note="active site" /db_xref="CDD:163614" misc_feature complement(order(1576422..1576424,1576617..1576619, 1576704..1576706,1576782..1576784,1576788..1576790)) /locus_tag="Acear_1481" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163614" gene complement(1577499..1578749) /locus_tag="Acear_1482" /db_xref="GeneID:9513537" CDS complement(1577499..1578749) /locus_tag="Acear_1482" /note="COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR001453:IPR020817:IPR008135:IPR008136; KEGG: ate:Athe_0985 competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; SPTR: B9MQY2 Putative competence-damage inducible protein; TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain" /codon_start=1 /transl_table=11 /product="competence/damage-inducible protein cinA" /protein_id="YP_003828057.1" /db_xref="GI:302392237" /db_xref="GeneID:9513537" /translation="MRAEIVSIGTELLLGQIVDANSAYIAEKLADLGIDLYYQMTVGD NQERLQKVLKRSLEHSDIVITTGGLGPTDDDLTREAVAEVMGVDLIKDEKLEEQIRGF FAELEREMTVNNLSQAYLPAGAEPIINSRGTAPGIIIERNGKTVISMPGVPPEMKQMM NKKVIPYLHDKAGSKELIKSKVLRVCGYGESSLETEIKDILDSQTNPTVALLSDKAEV HLRLTAKAGNQKMADNLINQVEAELRERLGDDIFGIDDETMEKVVGDRLREEVLTLAV AESCTGGLIGHRITNVSGSSDYFKQGVVVYSNQAKKDLVQVKEETLSEYGAVSRETAC EMAEGVKELADTDLGIAVTGIAGPTGGSEEKPVGLVYMGLADDKKVGSFKFKFHGSRK QIKYLTSQYTLDKLRRYLEGSIVL" misc_feature complement(1577511..1578749) /locus_tag="Acear_1482" /note="competence damage-inducible protein A; Provisional; Region: PRK00549" /db_xref="CDD:179060" misc_feature complement(1578246..1578746) /locus_tag="Acear_1482" /note="Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of...; Region: cinA; cd00885" /db_xref="CDD:58166" misc_feature complement(order(1578276..1578278,1578285..1578287, 1578297..1578302,1578540..1578548)) /locus_tag="Acear_1482" /note="putative MPT binding site; other site" /db_xref="CDD:58166" misc_feature complement(1577520..1577984) /locus_tag="Acear_1482" /note="Competence-damaged protein; Region: CinA; cl00666" /db_xref="CDD:186135" gene 1578892..1579521 /locus_tag="Acear_1483" /db_xref="GeneID:9513538" CDS 1578892..1579521 /locus_tag="Acear_1483" /note="KEGG: dae:Dtox_1693 hypothetical protein; SPTR: C1T9S3 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828058.1" /db_xref="GI:302392238" /db_xref="GeneID:9513538" /translation="MSLSDNQTDSAGYKQAIEKATERLARTEPEDIVHKTGVEFRNKE NEFVLTAFNQRYYIKYPTGEIDDSEAELPVTTGLKIIILHFLLTGNDWPLGNELISFR ELPDGTPYKDAFQREAVKPIIDSFCHKPQKLKKAAQKLGAEFTDRSDLGFTINTLPTI PLTYLIWLGDKELNGGANILFDSSIMTKLHTEDIAFLGEYTTKLLLRFS" misc_feature 1578973..1579506 /locus_tag="Acear_1483" /note="Domain of unknown function (DUF3786); Region: DUF3786; pfam12654" /db_xref="CDD:193131" gene complement(1579726..1580721) /locus_tag="Acear_1484" /db_xref="GeneID:9513539" CDS complement(1579726..1580721) /locus_tag="Acear_1484" /EC_number="2.3.1.41" /note="COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterProIPR016039:IPR004655:IPR013751:IPR013747:IPR 016038; KEGG: hor:Hore_10260 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: B8CWW3 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl-carrier-protein) synthase III" /protein_id="YP_003828059.1" /db_xref="GI:302392239" /db_xref="GeneID:9513539" /translation="MTKKVRKAGITGVGYYVPKNILTNYDLEEMLETSDKWIKSRTGI EERRIADDNEATSDLAFKAAKKALSDAELDAEDLDLILVATMTPDMLFPATACLLQDR LNATEAAAFDLEAACSGFAYGLSVASQFIASRAYDNILVIGAETISKILDWNNRNTCI LFGDGAGAAVVQPVESGGILGSILGADGSDSDLLKMPAGGSKRPVSQKTIENDLHYLE MDGNAVFKFAVRIVAKAALQVLKELGLTAEDIDFFIPHQANIRIIDAAAKRLNLNEQE VFINLDKYGNTSAASIPIALAEAVQADKIDKGDKILFVGFGAGLTWGANVIEWSY" misc_feature complement(1579735..1580706) /locus_tag="Acear_1484" /note="3-oxoacyl-(acyl carrier protein) synthase III; Reviewed; Region: PRK09352" /db_xref="CDD:181792" misc_feature complement(1579741..1580703) /locus_tag="Acear_1484" /note="Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl...; Region: KAS_III; cd00830" /db_xref="CDD:29417" misc_feature complement(order(1579765..1579767,1580134..1580139, 1580155..1580172,1580275..1580277,1580332..1580337, 1580344..1580349,1580356..1580358,1580380..1580400, 1580422..1580424,1580431..1580433,1580458..1580460, 1580464..1580466)) /locus_tag="Acear_1484" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29417" misc_feature complement(order(1579864..1579866,1579954..1579956, 1580371..1580373)) /locus_tag="Acear_1484" /note="active site" /db_xref="CDD:29417" misc_feature complement(1579945..1579947) /locus_tag="Acear_1484" /note="CoA binding pocket [chemical binding]; other site" /db_xref="CDD:29417" gene complement(1580847..1582799) /locus_tag="Acear_1485" /db_xref="GeneID:9513540" CDS complement(1580847..1582799) /locus_tag="Acear_1485" /note="COGs: COG0840 methyl-accepting chemotaxis protein; InterProIPR010989:IPR004089:IPR003660:IPR004010:IPR 004090; KEGG: ctc:CTC00888 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: C6PRU6 methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: Cache domain; HAMP domain; methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer with Cache sensor" /protein_id="YP_003828060.1" /db_xref="GI:302392240" /db_xref="GeneID:9513540" /translation="MNSIKKKLILITLVLILIPFIVSNLMNYYFISSGFESRVKEENL TLAHSISNNVEEFMNKAYKISERLTKNSDIISFEGSKQEAVLKETIEQNPYFKLFYIQ DTTGMQTARSSGTLGNRSGRWWFKKIMETKDPFISKSYFTLKDNIPVTSIIMPIYDQR GLQGIFGADLKLDHLQKLVEELSLGKGSHAYIIDGQGVVIAHPNKKQVSQLYNYRKMT KKVLVKDSNGNVVLDEEGNQKTELRKIEVPEKLKEITNEALNGRSGVAEYANNEGEGV ISAYYPIELKGDSDNWAVITVHNKKEAMGFVSSVGYKNIIIAVGLILLVITAMYFAAN KITTPILNLVGLMEEAAEGNLSVYSDYQGEDEIGRLSDSFNTMINDLRNIIQTTEKTA AETLSTSEELSASSQQTAAAVEEATALTEEFTSSVDQLSTNAQDMARSADEISDLAQN GLEDMKDTQQKMEEILQTSSKSQQAIEELNSYSLKIENIIDVISDISDQTNLLALNAA IEAARAGEAGHGFAVVAEEIRELAEETQKSVENIKNIIEELTSQTGQTVTTIQENSDQ IEAGAEMVNQTGEAFQEIADKIQNITAQIQTVAETGQSLADGSHEISKTSEEQAEATQ EMSTLAQQLSQMAGELKELVDRFEIE" misc_feature complement(1582173..1582403) /locus_tag="Acear_1485" /note="Cache domain; Region: Cache_1; pfam02743" /db_xref="CDD:145738" misc_feature complement(1581651..1581818) /locus_tag="Acear_1485" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(1580850..1581485) /locus_tag="Acear_1485" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1583096..1583386) /locus_tag="Acear_1486" /db_xref="GeneID:9513541" CDS complement(1583096..1583386) /locus_tag="Acear_1486" /note="InterPro IPR016155:IPR012675; KEGG: tne:Tneu_1338 MoaD family protein; PFAM: ThiS family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828061.1" /db_xref="GI:302392241" /db_xref="GeneID:9513541" /translation="MQVQVKYFATFCLETDFIQQEEIKLKSGATVKDLITRLSDRYGI GFKKRLFTKEGSLDSVSWIILNDKRLKKVKELELVLKSGDTISFSPPRLVGG" misc_feature complement(1583099..1583380) /locus_tag="Acear_1486" /note="Ubiquitin-like proteins; Region: UBQ; cl00155" /db_xref="CDD:193685" gene complement(1583370..1585283) /locus_tag="Acear_1487" /db_xref="GeneID:9513542" CDS complement(1583370..1585283) /locus_tag="Acear_1487" /EC_number="1.2.7.5" /note="COGs: COG2414 aldehyde:ferredoxin oxidoreductase; InterPro IPR001203:IPR013983:IPR013984; KEGG: kcr:Kcr_0275 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase; PRIAM: aldehyde ferredoxin oxidoreductase; SMART: aldehyde ferredoxin oxidoreductase; SPTR: B1L3K4 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase, N-terminal domain; aldehyde ferredoxin oxidoreductase, domains 2 & 3" /codon_start=1 /transl_table=11 /product="aldehyde ferredoxin oxidoreductase" /protein_id="YP_003828062.1" /db_xref="GI:302392242" /db_xref="GeneID:9513542" /translation="MNNQLDGWQGRVLWVDLTEKEVYKEELSEDLCRKYLGQSGINAK ILYDNVGPEVDPLDPENYLIFGVGPLGGTLAPCSGRFTVTSKAPLTGLFGDSNCGGHW GPELKYAGYDHIVITGKADQPVYLWINDEQVELRDASKVWGKTTWATEEYLQEKLGNN TIQVASIGPAGENLVNYAAIICNHNRAAGRTGMGAVMGSKNLKAIAVYGSKEIKVAEP KEFLDIAVESQEDIMDDPLYEVANTFGTTAITRLAQELGFLPTKNFQESTFSGADKLS GEKILEKYATKHKGCFNCPVSCSRYYKVDEGEYEGTVGEGPEYETISAMGTKCGNENL PSVLKANTLANQLGLDTISTGSVISWAMELYQRDIITSEDTGGLELEWGNHQELIELV KMIAHRKGFGDLLAKGAFKAAQEIGNSAEEYVVHSKGMEYPAVDVRGTKGMALGFAVA SRGGDHLKSLPLYEIAHDVYKEAIQEELGIEVEDEYWTQYETKPRLIAWHEEWHCVVD SLGLCKLEGIALKPLRPKHFAQLVSAATGVEFDEDRLQKIGERIWNLERLFNIREGLS REDDMPPKRMLEETIATGPSAGEGLSSAKFNSMLDEYYSLRGWDLANGIPKKQKLEEL NLNWEVKKSASTG" misc_feature complement(1583397..1585265) /locus_tag="Acear_1487" /note="Aldehyde:ferredoxin oxidoreductase [Energy production and conversion]; Region: COG2414" /db_xref="CDD:32549" misc_feature complement(1584651..1585262) /locus_tag="Acear_1487" /note="Aldehyde ferredoxin oxidoreductase, N-terminal domain; Region: AFOR_N; cl08354" /db_xref="CDD:158266" misc_feature complement(1583406..1584623) /locus_tag="Acear_1487" /note="Aldehyde ferredoxin oxidoreductase, domains 2 & 3; Region: AFOR_C; pfam01314" /db_xref="CDD:189938" gene complement(1585276..1585569) /locus_tag="Acear_1488" /db_xref="GeneID:9513543" CDS complement(1585276..1585569) /locus_tag="Acear_1488" /note="InterPro IPR017896; KEGG: eba:ebA5004 iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase; SPTR: C0GQF7 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828063.1" /db_xref="GI:302392243" /db_xref="GeneID:9513543" /translation="MGKAIEIRINSEQCRGCRRCALACSWGKEGGVNPRKAGIKIHKL EKGAKDRPMINQQCEEEFCGKTPFEDSEKRVPRCVEACLFGALELVEEVDSSE" misc_feature complement(<1585279..1585551) /locus_tag="Acear_1488" /note="Fe-S-cluster-containing hydrogenase components 2 [Energy production and conversion]; Region: HycB; COG1142" /db_xref="CDD:31337" gene 1586008..1587027 /locus_tag="Acear_1489" /db_xref="GeneID:9513544" CDS 1586008..1587027 /locus_tag="Acear_1489" /note="InterPro IPR000834; KEGG: cbi:CLJ_B1489 zinc carboxypeptidase family protein; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; SPTR: C3KUP1 Zinc carboxypeptidase family protein; PFAM: Zinc carboxypeptidase" /codon_start=1 /transl_table=11 /product="peptidase M14 carboxypeptidase A" /protein_id="YP_003828064.1" /db_xref="GI:302392244" /db_xref="GeneID:9513544" /translation="MKTKLISILLLICCLFFNLTGCHDNQNNSNSKIKQEDSPIITAV SDYNYSQMRKQMNQLEDKYESIKVSTIGKSLAKRNLYLLTLGSGKKKIGVIGGVHGRE GITSLLTLKLAEDYAKHLKQSQEIEGYNLEELLDKVTFCFIPMLNPDGIEIATHGIKN EVKDRNFYLKANEGSSGFKRWKANGRGVDLNKQFPADWNQVKSKNSPHFKSYKGPKPE SEPESQALADLTRSKKFEAVVAFHNSGNIIYWYYNQKGEEYNRDYKLGKLLSKETGYK LVAPEESSTAAAGYKDWFIKEFKLPGFTIEIGEGKTKQPLPSDKLGKYFKENRTTLLE LAQNI" misc_feature 1586227..1587003 /locus_tag="Acear_1489" /note="The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key...; Region: Peptidase_M14_like; cl11393" /db_xref="CDD:196209" misc_feature order(1586302..1586304,1586311..1586313,1586551..1586553, 1586578..1586583,1586731..1586736,1586749..1586751, 1586923..1586925) /locus_tag="Acear_1489" /note="active site" /db_xref="CDD:133066" misc_feature order(1586302..1586304,1586311..1586313,1586731..1586733) /locus_tag="Acear_1489" /note="Zn-binding site [ion binding]; other site" /db_xref="CDD:133066" gene complement(1587039..1587206) /locus_tag="Acear_1490" /pseudo /db_xref="GeneID:9513545" gene 1587448..1588749 /locus_tag="Acear_1491" /db_xref="GeneID:9513546" CDS 1587448..1588749 /locus_tag="Acear_1491" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: tex:Teth514_2350 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003828065.1" /db_xref="GI:302392245" /db_xref="GeneID:9513546" /translation="MKLAKYFIHKPNQTQQVVLGCLAYASARLYNIGNYQRKNWSKDS DEDYPDWYKQKKQLKTNFWYKNLPSQTAQETLKILADNWDSFYQSMEDYQDNPDKYNG KPNSPNYKPKDSKFNFRYLNNGFKIIDGKLRLSIPKQLKEYLKKEYSITNKFLWIRVP NELLSSNRDILNSTTRIEFKPLSDDTYKVILTYKVDTPTIKEDNGNYLSIDLGINNLM TCYSNQNQESFIIDGGQYLAINRYFDKKIKHYQSILNGQGKKTSKRIQNLYKKRRKQL FHLIHSATKKVVNYCVENNISRVIVGDIKNIRDNADLGKQTNQKLHKLPFDIIYHQLE YKLNLQGITLIKKSEKYTSQCSPYSKKVTKKYADKSNRIKRGLYVDKDNNQAFNADSI GAFNILRKYLQQRRKGPDITLQVKGLSNPVKYNWNNHQFAA" misc_feature 1587448..1588653 /locus_tag="Acear_1491" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature 1587634..1588371 /locus_tag="Acear_1491" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature 1588261..1588506 /locus_tag="Acear_1491" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature 1588423..1588647 /locus_tag="Acear_1491" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene complement(1588825..1589004) /locus_tag="Acear_1492" /db_xref="GeneID:9513547" CDS complement(1588825..1589004) /locus_tag="Acear_1492" /note="InterPro IPR017946:IPR004129; KEGG: tde:TDE0799 glycerophosphoryl diester phosphodiesterase, PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: C7GAV3 Glycerophosphoryl diester phosphodiesterase family protein; PFAM: Glycerophosphoryl diester phosphodiesterase family" /codon_start=1 /transl_table=11 /product="glycerophosphoryl diester phosphodiesterase" /protein_id="YP_003828066.1" /db_xref="GI:302392246" /db_xref="GeneID:9513547" /translation="MLKIGHRGTAGLAPENTAAAFKKAVELDLDMVELDVQLCELLGI EIPSFMVACFYGSYP" misc_feature complement(<1588888..1588995) /locus_tag="Acear_1492" /note="Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins; Region: GDPD; cd08556" /db_xref="CDD:176499" misc_feature complement(1588987..1588989) /locus_tag="Acear_1492" /note="catalytic site [active]" /db_xref="CDD:176499" misc_feature complement(order(1588900..1588902,1588906..1588908)) /locus_tag="Acear_1492" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:176499" gene complement(1589034..1590431) /locus_tag="Acear_1493" /db_xref="GeneID:9513548" CDS complement(1589034..1590431) /locus_tag="Acear_1493" /note="COGs: COG3314 conserved hypothetical protein; InterPro IPR011642; KEGG: aoe:Clos_2305 nucleoside recognition domain-containing protein; PFAM: nucleoside recognition domain protein; SPTR: A8MJ56 Nucleoside recognition domain protein" /codon_start=1 /transl_table=11 /product="nucleoside recognition domain protein" /protein_id="YP_003828067.1" /db_xref="GI:302392247" /db_xref="GeneID:9513548" /translation="MESNLEAELIHNQVETDPEEIEITTPKVLKFLIPSLIGIFMFLC PVPYDGAISTPVGVISEWLAAVGEAYLPIVVTVLITFSAVVSTLTTLFKPKFIINNAL LNKLFYTKKLYLVFRVLGAIFAILVLNKVGVKYIYSSDTGGTMMSLISSLVTWFFSAS FLMPLLMEFGAMDYTGTVVRSFVKPLFTLPGRAAIDLVTSWVGNCDVGVVLTRKQYNS GFYTGREAATIGTCFSAVSLPFCLVVAALLEVDALFIPFYATVVITGMVSVMIMSRIP PLSTLPDTYHSDTGKQIDEEEPEGMKKSEWALRKGIQRAEGAGGLTEILSQGAKTFLN IIFTLSPLVMAWGTIALIIATFTPIFDWLSLPFGYYLQFLGVPEAFKAAPATIVGFAD MFIPAILASSISSLKTRFIIGVLSLVQIIYMTEVGTLLVTSDIPVTFKDLAIIFLEKT VIVIPLIVLLTNLFI" misc_feature complement(1589052..1590353) /locus_tag="Acear_1493" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3314" /db_xref="CDD:33123" misc_feature complement(<1589745..1589987) /locus_tag="Acear_1493" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" gene complement(1590421..1591518) /locus_tag="Acear_1494" /db_xref="GeneID:9513549" CDS complement(1590421..1591518) /locus_tag="Acear_1494" /note="COGs: COG0371 Glycerol dehydrogenase; InterPro IPR001670:IPR016205; KEGG: aoe:Clos_2306 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: A8MJ57 Iron-containing alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase" /codon_start=1 /transl_table=11 /product="iron-containing alcohol dehydrogenase" /protein_id="YP_003828068.1" /db_xref="GI:302392248" /db_xref="GeneID:9513549" /translation="MSSTVGFPNYTIENGAIEKLGKLCSKYGEKVLVIGGKTALSKTE EEIKNTLKTNDLEIIDFIWYGGECTLHNIELKRKKAVETEADLIIGVGGGKALDTAKG AAEKADLPIFTVPTIAATCAATTPLSILYTAKGDFDSFFHLTKPPVHIFIDTKVIANA PAKYLRGGIGDTVAKHYEVEIKSRPDELAHASALGKEMSTMCVEPLVEYGFQALKDCR ENDVSFALKQVVLNNIITTGLVSMLVKEKYNGACAHSLCYGLTLIERLEEEFLHGELV AYGLLVQLIIDERENEFNKLYHFFDQVGLPVSLDHFKLEVNRKDLESILKEAVAGEDM IDMPYQVTEDDFYEAIKRLEMINKGEEEYGE" misc_feature complement(1590460..1591500) /locus_tag="Acear_1494" /note="Glycerol dehydrogenase-like; Region: GlyDH-like2; cd08171" /db_xref="CDD:173930" misc_feature complement(1590484..1591497) /locus_tag="Acear_1494" /note="Iron-containing alcohol dehydrogenase; Region: Fe-ADH; pfam00465" /db_xref="CDD:189559" misc_feature complement(order(1590703..1590705,1590745..1590747, 1590757..1590759,1590994..1590996,1591006..1591008, 1591027..1591029,1591051..1591053,1591105..1591107, 1591111..1591113,1591162..1591164,1591168..1591173, 1591216..1591218,1591225..1591227,1591234..1591242, 1591411..1591413)) /locus_tag="Acear_1494" /note="putative active site [active]" /db_xref="CDD:173930" misc_feature complement(order(1590703..1590705,1590757..1590759, 1591006..1591008)) /locus_tag="Acear_1494" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173930" gene complement(1591553..1592716) /locus_tag="Acear_1495" /db_xref="GeneID:9513550" CDS complement(1591553..1592716) /locus_tag="Acear_1495" /note="COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterProIPR015424:IPR004839:IPR015421:IPR004838:IPR 001176; KEGG: aoe:Clos_2304 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: A8MJ55 Aminotransferase class I and II; PFAM: Aminotransferase class I and II" /codon_start=1 /transl_table=11 /product="aminotransferase class I and II" /protein_id="YP_003828069.1" /db_xref="GI:302392249" /db_xref="GeneID:9513550" /translation="MKREVLAEEYLDQEQTIIAEIGALAQQYDDIINLSLGDPDYPTN SQVTEAAFQDAQEGYTRYTAAVGDPELRREIIKYNQKEFGYEVDLSQVMVTVGACHGM FLALESILDEGDEVIVPAPYFTPYLEQIRLAGGKPVILETTEDEGFQINAESLQALVT DKTKAVIINTPNNPTGVCFSEEVLTDLEEVVIEEDLIIFADEVYGALSFKHDFVPLAT RDRLQDRTITVASFSKDYAMTGWRVGYVIAPDFVIDSMQRVNEGICYAAPSISQRAAL HALRLHKEIQPLMVDEYKKRVNYAYQRIKTISNMSVLPPEATFYLFVNIKDTGLSSAE VSKKMLEEARVLAIPGTAFGECGEGYIRIACTVDKDKLKSAFDRLAEMKIFNQ" misc_feature complement(1591574..1592701) /locus_tag="Acear_1495" /note="aspartate aminotransferase; Provisional; Region: PRK08361" /db_xref="CDD:169403" misc_feature complement(1591574..1592623) /locus_tag="Acear_1495" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature complement(order(1591991..1591993,1592015..1592020, 1592024..1592026,1592105..1592107,1592198..1592200, 1592348..1592350,1592420..1592428)) /locus_tag="Acear_1495" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(1591895..1591897,1591904..1591906, 1591991..1591999,1592126..1592128,1592318..1592320, 1592417..1592419)) /locus_tag="Acear_1495" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(1592015..1592017) /locus_tag="Acear_1495" /note="catalytic residue [active]" /db_xref="CDD:99734" gene complement(1592884..1593081) /locus_tag="Acear_1496" /pseudo /db_xref="GeneID:9513551" gene 1593371..1593796 /locus_tag="Acear_1497" /db_xref="GeneID:9513552" CDS 1593371..1593796 /locus_tag="Acear_1497" /note="COGs: COG0517 FOG: CBS domain; InterPro IPR000644:IPR013785; KEGG: hor:Hore_06340 signal-transduction protein with CBS domains; PFAM: hypothetical protein; SMART: hypothetical protein; SPTR: B8D2G4 Putative signal-transduction protein with CBS domains; PFAM: CBS domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828070.1" /db_xref="GI:302392250" /db_xref="GeneID:9513552" /translation="MQLKNIMTSDVSTIDTNSTVQDAAKIMNDLDVGIVPVCSGQKPV GVVTDRDIVLRNTAQGGDINTPIEQVMSDDPVYGTPDMSPQEAAQLMSEKQIRRLPIV ENDNIVGIISLGDLSTESRTDMEAGKALSTISTPSRPEK" misc_feature 1593380..1593718 /locus_tag="Acear_1497" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature 1593395..1593727 /locus_tag="Acear_1497" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair_9; cd04622" /db_xref="CDD:73121" gene complement(1593933..1594511) /locus_tag="Acear_1498" /db_xref="GeneID:9513553" CDS complement(1593933..1594511) /locus_tag="Acear_1498" /note="COGs: COG0311 glutamine amidotransferase involved in pyridoxine biosynthesis; InterPro IPR002161; KEGG: cce:Ccel_1859 SNO glutamine amidotransferase; PFAM: SNO glutamine amidotransferase; SPTR: C7ICQ4 SNO glutamine amidotransferase; PFAM: SNO glutamine amidotransferase family" /codon_start=1 /transl_table=11 /product="pyridoxal phosphate synthase yaaE subunit" /protein_id="YP_003828071.1" /db_xref="GI:302392251" /db_xref="GeneID:9513553" /translation="MVKVGVLALQGGVEEHLSLLESLPEVEASPVKKQSELTKLDGLI IPGGESTTIGRLIEIFGLKEKLIELGKAGLPIWGTCAGMILLAKEILGSGKNHLGLMN ITVKRNGYGNQLASFRTEVEVPAVAEESLPLVFIRAPYVTEVGSEVKVLARIDENIVA VEEKNFLATSFHPELTTDSNFHQYFINKVNAR" misc_feature complement(1593954..1594502) /locus_tag="Acear_1498" /note="Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis; Region: GATase1_PB; cd01749" /db_xref="CDD:153220" misc_feature complement(order(1593990..1593992,1593996..1593998, 1594101..1594106,1594191..1594193,1594272..1594274, 1594365..1594373)) /locus_tag="Acear_1498" /note="predicted active site [active]" /db_xref="CDD:153220" misc_feature complement(order(1593990..1593992,1593996..1593998, 1594272..1594274)) /locus_tag="Acear_1498" /note="catalytic triad [active]" /db_xref="CDD:153220" gene complement(1594514..1595395) /locus_tag="Acear_1499" /db_xref="GeneID:9513554" CDS complement(1594514..1595395) /locus_tag="Acear_1499" /note="COGs: COG0214 Pyridoxine biosynthesis enzyme; InterPro IPR011060:IPR001852; KEGG: tte:TTE0823 pyridoxal biosynthesis lyase PdxS; PFAM: vitamin B6 biosynthesis protein; SPTR: C6PC70 Pyridoxine biosynthesis protein; TIGRFAM: pyridoxine biosynthesis protein; PFAM: SOR/SNZ family; TIGRFAM: pyridoxine biosynthesis protein" /codon_start=1 /transl_table=11 /product="pyridoxal phosphate synthase yaaD subunit" /protein_id="YP_003828072.1" /db_xref="GI:302392252" /db_xref="GeneID:9513554" /translation="MEEERYELNKNLAQMLKGGVIMDVTNSKEAEIAEEAGAVAVMAL ERVPADIRQDGGVARASDPAMVKEIIEAVTIPVMAKARIGHFVEAQILEEIGVDYIDE SEVLTPADEDNHIDKTKFDVPFVCGATDLGEALRRVGEGASMIRTKGEAGTGNVVEAV RHMRKIKAQIKELTTKDSEELMTAAKELKAPFELVKYVAENGKLPVINFAAGGVATPA DAAMMMQLGCDGVFVGSGIFKSGDPSKRGRAIVEAVAHYDDPEVVAEVSENLGEAMVG INVDTLSDDEKLAQRGW" misc_feature complement(1594517..1595395) /locus_tag="Acear_1499" /note="pyridoxal biosynthesis lyase PdxS; Provisional; Region: PRK04180" /db_xref="CDD:179769" misc_feature complement(1594520..1595368) /locus_tag="Acear_1499" /note="PdxS is a subunit of the pyridoxal 5'-phosphate (PLP) synthase, an important enzyme in deoxyxylulose 5-phosphate (DXP)-independent pathway for de novo biosynthesis of PLP, present in some eubacteria, in archaea, fungi, plants, plasmodia, and some...; Region: pdxS; cd04727" /db_xref="CDD:73389" misc_feature complement(order(1594700..1594702,1594757..1594759, 1594934..1594942,1595156..1595158,1595270..1595272, 1595327..1595329)) /locus_tag="Acear_1499" /note="active site" /db_xref="CDD:73389" misc_feature complement(order(1594616..1594618,1594739..1594744, 1594751..1594753,1594904..1594906,1594913..1594918, 1594925..1594927,1594931..1594939,1595063..1595077, 1595126..1595128,1595135..1595143,1595150..1595152, 1595195..1595197,1595219..1595221,1595225..1595227)) /locus_tag="Acear_1499" /note="multimer interface [polypeptide binding]; other site" /db_xref="CDD:73389" gene 1595592..1597064 /locus_tag="Acear_1500" /db_xref="GeneID:9513555" CDS 1595592..1597064 /locus_tag="Acear_1500" /note="COGs: COG1167 transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterProIPR015424:IPR000524:IPR004839:IPR011991:IPR 015421:IPR015422; KEGG: amt:Amet_3155 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: A6TSX6 Putative transcriptional regulator, GntR family; PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_003828073.1" /db_xref="GI:302392253" /db_xref="GeneID:9513555" /translation="MIASIELKKSASKHLYLQLYSQLRELILKGELEADTKLPPIRKF SKKLSVNNITIVNAYNLLEEEDLVYKKVGSGTFVAPLTNQHKEEQNNYLDEQVYIDED TKFTEQQEKMINFATGAPTPDLFPIAPFKRLVNKVLDRDGGYAFGYQKSQGYLELRKT ISSYITNYNIKADIDEIQIISGAQQGIDILAKTFLDYGDTVFVERPTYPGAISVFNSR KANIVEIPITSEGIDTAVLEEKLAEYNPEFLYLMPNFQNPTGYSYSKTTKERIIELAN EYSLLIIEDDCLGDLNYTSKDNKSLKSLDQNQRIIYIKSFSKVFMPGLRLAFLLIPNR YFEDILISKYISDIFTDGLVQRVLDLYFKEEMWEEQITTLKDTYSQRYQTMCNALQEY LPQKVEFTIPQGGLNFWLELPAELTDKKLQQQALKKDINLAPGSVFYAAAPPDNRIRL SIAAASQKEIRRGIKKLASIIKDQLENNGYQLNNSFLPLV" misc_feature 1595634..1597022 /locus_tag="Acear_1500" /note="Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:31361" misc_feature 1595634..1595828 /locus_tag="Acear_1500" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature order(1595637..1595639,1595706..1595708,1595712..1595717, 1595739..1595753,1595757..1595762,1595769..1595771, 1595799..1595804,1595808..1595819) /locus_tag="Acear_1500" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature 1595928..1596995 /locus_tag="Acear_1500" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature order(1596135..1596143,1596213..1596215,1596360..1596362, 1596453..1596455,1596534..1596536,1596540..1596545, 1596564..1596566) /locus_tag="Acear_1500" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature order(1596144..1596146,1596243..1596245,1596432..1596434, 1596558..1596566,1596651..1596653,1596660..1596662) /locus_tag="Acear_1500" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature 1596543..1596545 /locus_tag="Acear_1500" /note="catalytic residue [active]" /db_xref="CDD:99734" gene complement(1597093..1597617) /locus_tag="Acear_1501" /db_xref="GeneID:9513556" CDS complement(1597093..1597617) /locus_tag="Acear_1501" /note="KEGG: bld:BLi01570 hypothetical protein; SPTR: C0GEU0 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828074.1" /db_xref="GI:302392254" /db_xref="GeneID:9513556" /translation="MQQLEKKLIAAVLILLVLVGIYFSGVINNRKAGNTNPAKMKLDD YIPYLIKETTGGIIDFGSDTLLSYKVNSDMLLLKLHANESYSEKKTQRKINQSSIKIL KKFFIDREDIKKVVLNWYLELPDSRGERKLRKVLALVMTKEEAVTVNWNSLTAYDLSN TVAGYWIHPILKAD" gene complement(1598515..1599267) /locus_tag="Acear_1502" /db_xref="GeneID:9513557" CDS complement(1598515..1599267) /locus_tag="Acear_1502" /note="KEGG: nth:Nther_2770 hypothetical protein; SPTR: B2A2V2 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828075.1" /db_xref="GI:302392255" /db_xref="GeneID:9513557" /translation="MIQLVVICKVEPDERGGTIESKDNEGIPFLITISYLLSFLSIRL MVLIAGAAESTFAEIAKQGGTLEIDFYIGRNIILFGHHIHHFYFGILLISLAGWLSIV GSTKFTNRHLALMYGSGLGLLMDEIGLLLTWGHYYSSLTYLLSLFLVGIFLNIIFFPD FWYEVRNNILKSRPDSVTWNTLLVHSDFIKVVDNVSKELNKTERASLIFTGIAYVCVG ILILLYPRFVYYWVAGIFIIQGISSLVNAWQK" gene complement(1599242..1600117) /locus_tag="Acear_1503" /db_xref="GeneID:9513558" CDS complement(1599242..1600117) /locus_tag="Acear_1503" /note="COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197:IPR013785:IPR006638; KEGG: swo:Swol_0443 oxygen-independent coproporphyrinogen III oxidase, PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C0GCW8 radical SAM domain protein; PFAM: radical SAM superfamily" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003828076.1" /db_xref="GI:302392256" /db_xref="GeneID:9513558" /translation="MRYEGKVYRPPSEASSVIIQSTVGCPHNQCNFCNMYKEKKFKIR PIEEIKEDLDEAKNHYGVNARRLFLADGNSILMKTDQLIEVLEYAYEVFPDLERVTTY GSAYFIALKSLAELRRLQSAGLTRIHSGMESGDNEVLEMINKGVTFEEIVEAGRMVKA ADIELSEYYMVGVGGTELSQKHAINSARALNQIDPDFIRLRTFIPLSGTPMYQQYKTG ELNLLSPHQALQETKMLIQNFKDISSQLLSDHISNYWDVSGKLPEDKNQMIQEINRAL EINETEFRDPASGHL" misc_feature complement(1599425..1600066) /locus_tag="Acear_1503" /note="Radical SAM; Region: Elp3; smart00729" /db_xref="CDD:128968" misc_feature complement(1599482..1600048) /locus_tag="Acear_1503" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(1599509..1599514,1599608..1599610, 1599728..1599730,1599806..1599814,1599899..1599904, 1599908..1599910,1600016..1600024,1600028..1600030, 1600037..1600039,1600043..1600045)) /locus_tag="Acear_1503" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" gene complement(1600170..1601072) /locus_tag="Acear_1504" /db_xref="GeneID:9513559" CDS complement(1600170..1601072) /locus_tag="Acear_1504" /note="COGs: COG1597 Sphingosine kinase; InterPro IPR005218:IPR001206; KEGG: cac:CAC0679 lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; SPTR: Q97L83 Unsharacterized protein, BmrU family; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU)" /codon_start=1 /transl_table=11 /product="diacylglycerol kinase catalytic region" /protein_id="YP_003828077.1" /db_xref="GI:302392257" /db_xref="GeneID:9513559" /translation="MKLLKLIYNPVSGNEDFTESLDYCIQRLQSLGYLVSLYRTEKNQ ELTKAFFDIEKLNYDGVITAGGDGTINKVINLMKRYNLDMPLGIIPAGTSNDLAVHLT IPYNLDGALDVIAKDNIKAVDLGEIKGDREKFFINVCAGGLFANVAHQTDRRFKNAFG KLAYYLNGLTEISTFEAVPLEITTCETVIKEEVLLFLIFNGSSAGGFNNLGKAAKIDD GLLDLIAVKNVSFNKLPALLVKILQGSHIQDENIIHCKSDYIKVELLDDSIDDFRVDI DGEEGPLLPIEACVHFQEIKIFTP" misc_feature complement(1600212..1601072) /locus_tag="Acear_1504" /note="putative lipid kinase; Reviewed; Region: PRK13059" /db_xref="CDD:183858" misc_feature complement(1600692..1601063) /locus_tag="Acear_1504" /note="Diacylglycerol kinase catalytic domain; Region: DAGK_cat; cl01255" /db_xref="CDD:194084" gene complement(1601113..1601913) /locus_tag="Acear_1505" /db_xref="GeneID:9513560" CDS complement(1601113..1601913) /locus_tag="Acear_1505" /note="InterPro IPR000415; KEGG: nth:Nther_1558 nitroreductase; PFAM: nitroreductase; SPTR: C0GKP5 Nitroreductase; PFAM: Nitroreductase family" /codon_start=1 /transl_table=11 /product="nitroreductase" /protein_id="YP_003828078.1" /db_xref="GI:302392258" /db_xref="GeneID:9513560" /translation="MKLPVDEWLEAVKVRKSRRRFIDRPIEEEKITRMERCCVGFRPF SGVRGKLVKDSADEVFSGVIGSYGSVKGTSSYIVFIGDTTTPNVEAKVGYLGEGLVLE ATLLGLSTCWIGGFFKPEVAAKQIDLAEKEKVFAVTPLGYTKESKSFEEKVMGWMAKS HQRKSLSEIAAGYNEDNWPGWVKQGLKAARVAPSAVNRQPWRFNYDKDSVLLSLDNTK DKYDIPKELDCGIAMLHFELGALKAGVKGSWEFLSTPKVARYKLEKLN" misc_feature complement(1601407..1601889) /locus_tag="Acear_1505" /note="Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are...; Region: Nitro_FMN_reductase; cl00514" /db_xref="CDD:193848" misc_feature complement(order(1601566..1601568,1601572..1601574, 1601797..1601799,1601857..1601859,1601863..1601865, 1601869..1601871)) /locus_tag="Acear_1505" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73303" misc_feature complement(order(1601611..1601613,1601620..1601625, 1601626..1601628)) /locus_tag="Acear_1505" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73303" misc_feature complement(1601119..1601370) /locus_tag="Acear_1505" /note="Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are...; Region: Nitro_FMN_reductase; cl00514" /db_xref="CDD:193848" misc_feature complement(order(1601152..1601157,1601326..1601328)) /locus_tag="Acear_1505" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73303" misc_feature complement(order(1601200..1601202,1601209..1601214, 1601221..1601226,1601230..1601232)) /locus_tag="Acear_1505" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:73303" gene complement(1601951..1603414) /locus_tag="Acear_1506" /db_xref="GeneID:9513561" CDS complement(1601951..1603414) /locus_tag="Acear_1506" /note="COGs: COG0612 Zn-dependent peptidase; InterPro IPR011249:IPR011765:IPR007863:IPR011237; KEGG: taf:THA_808 peptidase M16 inactive domain family; PFAM: peptidase M16 domain protein; SPTR: B7IGQ6 peptidase M16 inactive domain family; PFAM: peptidase M16 inactive domain; Insulinase (peptidase family M16)" /codon_start=1 /transl_table=11 /product="peptidase M16 domain protein" /protein_id="YP_003828079.1" /db_xref="GI:302392259" /db_xref="GeneID:9513561" /translation="MKKITLVLMLVVIISLVAVQTSYAGVDFDQELFKELAKNKNKIP KIDIPDYKRVELENGMIIYLVKNDELPIVELTGYIKGGRRQEKKDIAGISGFMFEMMN TGTKELSEQDFLRYKELHGIGFNFGVNKDYFKFSGNALSTDKEALISLTADILRYPKF DAEYFKRIKQEKKRSLAQAKTEEDSLLDMYFYRNLYEDHPYSFSSDLNLKMKALDNIT PSSLQKFHRRNVAPNNIVLGIIGDIDLSQMEKLVREQFSDWSKRETRIRQPEIKENKD DHNKVILINKPDATQATIKMGYNFFSNSFEDKIPFEMANRVYGSGRFGSRLMENLRSE KGYVYSVYSRDNYYELGGDYYITTEVKPAKSDETIAAIKKEMLSIKRGKNKISEDELF KIINRYNALFPKVYNSKLSILNKVIYNAEIRDRKPNYMNEYIQEYNNLDAATAQKVFA EYTYPNRFLTVIVGKKQDILPEFENQGIDVEVVEIGT" misc_feature complement(1601999..1603264) /locus_tag="Acear_1506" /note="Predicted Zn-dependent peptidases [General function prediction only]; Region: PqqL; COG0612" /db_xref="CDD:30957" misc_feature complement(1602809..1603183) /locus_tag="Acear_1506" /note="Insulinase (Peptidase family M16); Region: Peptidase_M16; pfam00675" /db_xref="CDD:189663" misc_feature complement(1602221..1602769) /locus_tag="Acear_1506" /note="Peptidase M16 inactive domain; Region: Peptidase_M16_C; pfam05193" /db_xref="CDD:191225" gene complement(1603439..1604797) /locus_tag="Acear_1507" /db_xref="GeneID:9513562" CDS complement(1603439..1604797) /locus_tag="Acear_1507" /note="COGs: COG0612 Zn-dependent peptidase; InterPro IPR011249:IPR011765:IPR007863:IPR011237; KEGG: taf:THA_809 zinc protease; PFAM: peptidase M16 domain protein; SPTR: B7IGQ7 Zinc protease; PFAM: peptidase M16 inactive domain; Insulinase (peptidase family M16)" /codon_start=1 /transl_table=11 /product="peptidase M16 domain protein" /protein_id="YP_003828080.1" /db_xref="GI:302392260" /db_xref="GeneID:9513562" /translation="MKRIVRLLLISLLIISCFVSTALAESNSNQKLFIPEVDYSHFKL ENGLQIYVFEDHQVPLANFSLWYKVGSIDESEEVAGISHLLEHVMFLGTDTLKKDQIH QLIKSVGGTNNAGTYYDYTMYYEEIPSAKLELAMAIEADRMRNLRINPKEFKRERKVV KQERRMRLENNVYSSALEEIQAKAFTKSPLQHQIIGQMESLSNITAEDMQNYYTKYYA PNNAVMVVSGDVNAQEVYRLAKEYYGDYHPQQIERLKMKEPKQTEEKFIKLEKMTELP MVGMMYKIPEGNHPDIVPIEALLNIWINNATSRVKTELKQKQRIIIQAGGFPLAIRRP GHVLVYVMPMSEEMMDRVKEGIDQELHRLIEEGITDEELRIVKKAVLKERIFKQKNIS STARTVAQNVIRYGKPEFYQTEIKRWKNLTKEDIIRVAEKYFTEDNRTVGYVMPQKDK ED" misc_feature complement(1603442..1604677) /locus_tag="Acear_1507" /note="Predicted Zn-dependent peptidases [General function prediction only]; Region: PqqL; COG0612" /db_xref="CDD:30957" misc_feature complement(<1604348..1604635) /locus_tag="Acear_1507" /note="Insulinase (Peptidase family M16); Region: Peptidase_M16; pfam00675" /db_xref="CDD:189663" misc_feature complement(1603658..1604191) /locus_tag="Acear_1507" /note="Peptidase M16 inactive domain; Region: Peptidase_M16_C; pfam05193" /db_xref="CDD:191225" gene complement(1604889..1605450) /locus_tag="Acear_1508" /pseudo /db_xref="GeneID:9513563" gene complement(1605819..1606289) /locus_tag="Acear_1509" /db_xref="GeneID:9513564" CDS complement(1605819..1606289) /locus_tag="Acear_1509" /note="KEGG: ate:Athe_2271 hypothetical protein; SPTR: B9MMP4 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828081.1" /db_xref="GI:302392261" /db_xref="GeneID:9513564" /translation="MIFIKNEFDFNDDLVELQGLYEPEDIKKYCKLPKKEFVKELKLK VPEEKPDIEQLAKILINADVFKFKTINTIEGLKVIFQGKINKKILYVADNPEQSVHAA HFQTSFCQFLKLPDSFKVKKIKVFIEDVSTTIVNPRKINECVVIFVCAIPKCMD" misc_feature complement(1605876..1606139) /locus_tag="Acear_1509" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" gene 1606636..1607121 /locus_tag="Acear_1510" /db_xref="GeneID:9513565" CDS 1606636..1607121 /locus_tag="Acear_1510" /note="KEGG: cbt:CLH_0177 hypothetical protein; SPTR: C5UU58 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828082.1" /db_xref="GI:302392262" /db_xref="GeneID:9513565" /translation="MGAIQNPDVVQLCPAFPDREALYFKEIFVSDTFKIPEEKPDKEQ IVNVNTSVDLVDVQTIEVELPDGETGEKVFTAGNIYLDVQYSSTRETQTVHFVRYQLP FQTYIVTDCGDLITEGELPDDYVVHVCIEKMLEEQIDERTINFELLLLVWVEDATPPV Q" misc_feature 1606753..1607058 /locus_tag="Acear_1510" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" gene 1607149..1607973 /locus_tag="Acear_1511" /db_xref="GeneID:9513566" CDS 1607149..1607973 /locus_tag="Acear_1511" /note="KEGG: cbt:CLH_0177 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828083.1" /db_xref="GI:302392263" /db_xref="GeneID:9513566" /translation="MNKLTEKSLAQEQCPEEDVLINSFTEVIVCEELEIPPQKPPKEH IADTSVTPIVDDIEVIEVDLGDQEEPRKKVVASGNLNIGIEYSALEDEQQIHFAHFGV PFQGIIGLRPCISDPQVDGFNRGLLPACFDLDDFNLNACVEHKQFHQITERKIKVVIV VLLWLEPKFELNFTQPAEDGTEISNDADFTLEAEVVDGIPLSEGQFEWAPVTDPDDTT TICTDADPDGTISCDWLVGDLPAADTEVIITATAIPECYSYLEIQDTVTATIVAAP" misc_feature 1607266..1607607 /locus_tag="Acear_1511" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" gene 1608038..1608457 /locus_tag="Acear_1512" /db_xref="GeneID:9513567" CDS 1608038..1608457 /locus_tag="Acear_1512" /note="KEGG: csc:Csac_0235 hypothetical protein; SPTR: A4XG47 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828084.1" /db_xref="GI:302392264" /db_xref="GeneID:9513567" /translation="MLTFTGIFDQVPIDSKLVIPPQKPEMEYILDTKVNVIINKDEVI DTPLLVPEAEDEVQLRKVVVSGIVEIKIVYSALVPDQKVHAAHFNVPFCELIEWPDGP PQGTPIEVDPVIEKEVFMKEDERRIFKSLLIRLDIYR" misc_feature 1608107..1608382 /locus_tag="Acear_1512" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" gene 1608537..1609007 /locus_tag="Acear_1513" /db_xref="GeneID:9513568" CDS 1608537..1609007 /locus_tag="Acear_1513" /note="KEGG: cbt:CLH_0177 hypothetical protein; SPTR: C5UU58 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828085.1" /db_xref="GI:302392265" /db_xref="GeneID:9513568" /translation="MPKKCFGDNVGDEMCPGEGDVISFHIQTTLSGLLDIPLQKPPKE EIFDSTHEIDITKLKSITVARPQGKKVLVTGTFMAGIEYLAKTEEQTVHFFHSDIPFQ VLIKDNDGTMLDLDFDLNEYIAHVCVEHEEYQQVDERTIAYEVVLLIWLQRKDN" misc_feature 1608657..1608953 /locus_tag="Acear_1513" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" gene 1609024..1609473 /locus_tag="Acear_1514" /db_xref="GeneID:9513569" CDS 1609024..1609473 /locus_tag="Acear_1514" /note="KEGG: csc:Csac_0235 hypothetical protein; SPTR: A4XG47 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828086.1" /db_xref="GI:302392266" /db_xref="GeneID:9513569" /translation="MLTFMDMAGDPEVFDELVINHNLTIPEEKPVMEKLLGYKIKYKI KKAAVIATPLVENGLPVRKVIIKGDAKITIKYVADVPDQQVHGAHFKAPFSKLIMWPG GPAPETPLCVEVLEEHVQIHMLDSKHLSKVIVIQLNVSVNKKGGDKD" misc_feature <1609210..1609401 /locus_tag="Acear_1514" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" gene 1609473..1611794 /locus_tag="Acear_1515" /db_xref="GeneID:9513570" CDS 1609473..1611794 /locus_tag="Acear_1515" /note="InterPro IPR001434; KEGG: gme:Gmet_2043 hypothetical protein; SPTR: Q39U02 Putative uncharacterized protein; TIGRFAM: hypothetical protein; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; conserved repeat domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828087.1" /db_xref="GI:302392267" /db_xref="GeneID:9513570" /translation="MAVIGGIDLGNLTDYLLFFADANEDANWQGASKGFAGDVAVDGI QANERTSGFVPYAGTITTNDLTLDAWQDIVDDNPLQATGVTGQVALINDLETDLINAF QQINALSTNLPPGVTAPVSSTDLNGVDTTNGTAETFVIDIVDGLSFSSKIFITGDPED VFILRWDEDPGTPGYQGQVKPQSGGAIVPQGGLEPGNFINVAGDINASGGGTTPAAPY PQGPRLDDGQGALINGGDDFDGGGFFTGYWLTTGSPTDSGPGGLLIGDTSSLSNGIFV GGWYTLTTKFSMTSGTSGVYVSPNPATLGEPSVDVEKFVSPDGGTTFFDADTPPGPNI VMGTDPEYRIVVTNTGNETLTNITLTDDVLGAFATPASLAPGDSFEVTATGTWAEGLN TNTATVTADGDTVTGLTDSDPANYTGVTASIDVEKLVSADGGMTFVDADTPPGPDIVT GTDPVFKYVVTNNGTEILTDISLIDSKLGPITIPTTTLNPGESFEVTAAGTWAEGQQT NTATATGTFDSTIVEDTDPANYFGAANAAIDIEKLVSGDGGLTFFDADTPTGPLINED TDPQFKFIVTNTGDAPLTDITVTDTVLGFITTIPSLNPGDSDETIVIGTWAGGQQTNT ATAEGTFNDQTLTDTDPANYFGIPECFSQLLIDGDLEIPEPKPDIAKIVDFNVKSKVN DIDIFDTVDGTKIIVGGFVKIGITYVADNEQQTEHFAHFRVPFSATLVCPEIPLDAKL EPIIVIEHEQHHIIDERTISKDIVMLVGVIENC" misc_feature 1611471..>1611689 /locus_tag="Acear_1515" /note="Domain of unknown function (DUF3794); Region: DUF3794; pfam12673" /db_xref="CDD:193149" gene complement(1611958..1612224) /locus_tag="Acear_1516" /db_xref="GeneID:9513571" CDS complement(1611958..1612224) /locus_tag="Acear_1516" /note="InterPro IPR016155:IPR010038:IPR003749:IPR012675; KEGG: tac:Ta0895 hypothetical protein; PFAM: thiamineS protein; SPTR: A8VXJ2 methyltransferase type 12; TIGRFAM: MoaD family protein; PFAM: ThiS family; TIGRFAM: MoaD family protein, archaeal" /codon_start=1 /transl_table=11 /product="MoaD family protein" /protein_id="YP_003828088.1" /db_xref="GI:302392268" /db_xref="GeneID:9513571" /translation="MKVKLLATLRDITDCKEVCLEASNINQVIDELIAEYGSAMENKL LDDKEVRESLTILVNGRNILYLDGLETELKTKDVVTIFPRVAGG" misc_feature complement(1611961..1612224) /locus_tag="Acear_1516" /note="Ubiquitin domain of MoaD-like proteins; Region: MoaD; cd00754" /db_xref="CDD:176354" misc_feature complement(order(1611961..1611963,1611970..1611978, 1611991..1611993,1612048..1612050,1612192..1612197, 1612201..1612209)) /locus_tag="Acear_1516" /note="MoaE interaction surface [polypeptide binding]; other site" /db_xref="CDD:176354" misc_feature complement(order(1611961..1611963,1611970..1611972, 1611976..1611978,1612192..1612197,1612204..1612209)) /locus_tag="Acear_1516" /note="MoeB interaction surface [polypeptide binding]; other site" /db_xref="CDD:176354" misc_feature complement(1611961..1611963) /locus_tag="Acear_1516" /note="thiocarboxylated glycine; other site" /db_xref="CDD:176354" gene complement(1612245..1614044) /locus_tag="Acear_1517" /db_xref="GeneID:9513572" CDS complement(1612245..1614044) /locus_tag="Acear_1517" /EC_number="1.2.7.5" /note="COGs: COG2414 aldehyde:ferredoxin oxidoreductase; InterPro IPR001203:IPR013983:IPR013985:IPR008162; KEGG: mta:Moth_0722 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase; PRIAM: aldehyde ferredoxin oxidoreductase; SMART: aldehyde ferredoxin oxidoreductase; SPTR: Q2RKJ9 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase, N-terminal domain; aldehyde ferredoxin oxidoreductase, domains 2 & 3" /codon_start=1 /transl_table=11 /product="aldehyde ferredoxin oxidoreductase" /protein_id="YP_003828089.1" /db_xref="GI:302392269" /db_xref="GeneID:9513572" /translation="MAGWMGQILRIDLSTEEATVEELDEELAKDYIGARGLGTKLFCD EVAPEVDPLSADNKLIFATGPLTGTAAVSASRYNVVTKSPLTGTIAASNSGGYFPSEI KYAGYDVVIFEGEADRPVYILIDDGEVEIKPAEDLWGLTTLETDNQLREEYGDGFKIS AIGPAGEQQVKFACIMNDRERAAGRSGVGAVMGSKKIKAVMVRGSQGIKPADRDEFKE VLRDCLTKIEESGVTNEGLPALGTPVLVNIVNEHGNLPAENFQENVFDRAEKVSGEKL ADELLVKNKACAGCPIGCGRVTALSSDKYEGFGEGPEYETIWAFGPDCGIDDLEAITK ANYICNELGLDTITMGTTIACAMEMYEEGIIDSDEIDLDLEFGNAEAMIEAVKLTGKK EGIGAKLAEGSKRVADSYGHPEYSMSSKKQEYPAYDPRGSQGMGLEYATSNRGGCHVR GYLTSPEVLGIPEPVDPLTVEGKAELTKTFQDLTAVVDSSGICLFTTFALGGEDIYKL LEAVTGAEYTQEEMMEAGERIWNLERQFNLEAGIGPDEDKLAKRLLEEPAPKGAAEGR VVELDTMLAEYYELRGWTPEGEIKEEKKEALGL" misc_feature complement(1612248..1614044) /locus_tag="Acear_1517" /note="Aldehyde:ferredoxin oxidoreductase [Energy production and conversion]; Region: COG2414" /db_xref="CDD:32549" misc_feature complement(1613427..1614035) /locus_tag="Acear_1517" /note="Aldehyde ferredoxin oxidoreductase, N-terminal domain; Region: AFOR_N; cl08354" /db_xref="CDD:158266" misc_feature complement(1612248..1613399) /locus_tag="Acear_1517" /note="Aldehyde ferredoxin oxidoreductase, domains 2 & 3; Region: AFOR_C; pfam01314" /db_xref="CDD:189938" gene complement(1614045..1614530) /locus_tag="Acear_1518" /db_xref="GeneID:9513573" CDS complement(1614045..1614530) /locus_tag="Acear_1518" /note="COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896:IPR001450:IPR017900; KEGG: mta:Moth_0721 4Fe-4S ferredoxin, iron-sulfur binding; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B0NIY9 Putative uncharacterized protein; PFAM: 4Fe-4S binding domain" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003828090.1" /db_xref="GI:302392270" /db_xref="GeneID:9513573" /translation="MKKTLLINPEKCIGCRTCELMCSLEHESEFNPSLARITMINFPE EIDTIPITCLHCEDPSCQEACPTGAINKIEETGAVVIDHDKCIGCNMCMMVCPIGIIS TAETETSAHNSKCDLCGGEPECVEFCPTGALEYGRPDEVLLDRKKKLAKRLNNLIEEA I" misc_feature complement(1614108..1614530) /locus_tag="Acear_1518" /note="Fe-S-cluster-containing hydrogenase components 2 [Energy production and conversion]; Region: HycB; COG1142" /db_xref="CDD:31337" gene complement(1614701..1616182) /locus_tag="Acear_1519" /db_xref="GeneID:9513574" CDS complement(1614701..1616182) /locus_tag="Acear_1519" /EC_number="3.6.4.6" /note="COGs: COG0465 ATP-dependent Zn protease; InterPro IPR003959:IPR000642:IPR003593:IPR003960; KEGG: hor:Hore_11930 microtubule-severing ATPase; PFAM: ATPase AAA; peptidase M41; PRIAM: vesicle-fusing ATPase; SMART: AAA ATPase; SPTR: B8CXC4 Microtubule-severing ATPase; PFAM: peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH" /codon_start=1 /transl_table=11 /product="vesicle-fusing ATPase" /protein_id="YP_003828091.1" /db_xref="GI:302392271" /db_xref="GeneID:9513574" /translation="MVKEISLGVGIAVVIFLAFRGINLFPALILVGIGYFLFNIFKNQ GLGTKKSFNTHQGAEESFSDVTFEDIGGQETAKNELLEALEFVRDINKVKSLGIRPLK GIMLSGPPGTGKTLMAKAVARHIDSVFISTSGSEFVEMYAGVGAKRVRELFEKAKDSA HKKNKTNAVIFIDEIEILGGKRGQNSSHLEYDQTLNQLLVELDGMSIDDEINILVIGA TNRIDILDKAILRPGRFDRIVKVDLPDKDGRHKILEIHTRDKPLAEDVDLEQIAKETF RFSGAHLESLANEAAIMAMRANSKEIKSSHFKEAIDKVMMGEKLNRRPRQEELERIAY HETGHALVAEFVKPGSVSTINITSRGKALGYVRHNPEDDHYLQTLNYLKGQIAICIAG AIAEEIILGNRSTGAANDFEKATELAKKIIFAGMSDLGVVSKDHLAPNKVQEEINKII TAEEERVNQWISSKQDLILEVVARLLEEESITGEEFRKKLQIK" misc_feature complement(1614722..1616119) /locus_tag="Acear_1519" /note="ATP-dependent metalloprotease FtsH; Region: FtsH_fam; TIGR01241" /db_xref="CDD:162266" misc_feature complement(1615454..1615972) /locus_tag="Acear_1519" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(1615838..1615861) /locus_tag="Acear_1519" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(1615523..1615525,1615664..1615666, 1615835..1615858)) /locus_tag="Acear_1519" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(1615661..1615678) /locus_tag="Acear_1519" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(1615481..1615483) /locus_tag="Acear_1519" /note="arginine finger; other site" /db_xref="CDD:99707" misc_feature complement(1614722..1615219) /locus_tag="Acear_1519" /note="Peptidase family M41; Region: Peptidase_M41; pfam01434" /db_xref="CDD:144872" gene complement(1616175..1616726) /locus_tag="Acear_1520" /db_xref="GeneID:9513575" CDS complement(1616175..1616726) /locus_tag="Acear_1520" /note="KEGG: hor:Hore_11940 hypothetical protein; SPTR: B8CXC5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828092.1" /db_xref="GI:302392272" /db_xref="GeneID:9513575" /translation="MEFKGVRLELVAVGLIISLVIFFGGNYYIQNYRTEDLLREELLA IKEVEKIEINNLNETREVSITLNQVGNLQNLYQELDSLLNSSLGRGNYIIKLENSDNE KLMTAYQKIHLSVYESIITGRFTDLGNKLGELKDRLKLDSAEVSVDESNIYLKLGVGG DEYYKVIKRSYPAGALQGGGSSG" gene complement(1617238..1617681) /locus_tag="Acear_1521" /db_xref="GeneID:9513576" CDS complement(1617238..1617681) /locus_tag="Acear_1521" /note="COGs: COG1267 Phosphatidylglycerophosphatase A and related protein; InterPro IPR007686; KEGG: sul:SYO3AOP1_0645 phosphatidylglycerophosphatase A; PFAM: phosphatidylglycerophosphatase A; SPTR: B2V8K8 Phosphatidylglycerophosphatase A; PFAM: Phosphatidylglycerophosphatase A" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphatase A" /protein_id="YP_003828093.1" /db_xref="GI:302392273" /db_xref="GeneID:9513576" /translation="MLKKRIIKLLATGFYSGLSPIAPGTVGTIAALVFAFIWLQKYTI NFAFILFFVIAGTLISQWAEELYGVKDAAQIVIDEWAGFFIAVFGLGVDNFIPAFILF RIFDILKPPPIKNLQQFHGGIGIMLDDILAGLMANVLLRLVLNFL" misc_feature complement(1617250..1617663) /locus_tag="Acear_1521" /note="Phosphatidylglycerophosphatase A; a bacterial membrane-associated enzyme involved in lipid metabolism; Region: PgpA; cd06971" /db_xref="CDD:133477" misc_feature complement(order(1617250..1617255,1617361..1617366, 1617370..1617375,1617379..1617387,1617391..1617399, 1617421..1617423,1617430..1617435,1617439..1617444, 1617451..1617459,1617466..1617468,1617514..1617519, 1617526..1617531,1617538..1617540,1617586..1617588, 1617652..1617654)) /locus_tag="Acear_1521" /note="tetramer interfaces [polypeptide binding]; other site" /db_xref="CDD:133477" misc_feature complement(order(1617295..1617300,1617307..1617309, 1617445..1617450,1617457..1617459)) /locus_tag="Acear_1521" /note="binuclear metal-binding site [ion binding]; other site" /db_xref="CDD:133477" gene complement(1617659..1618225) /locus_tag="Acear_1522" /db_xref="GeneID:9513577" CDS complement(1617659..1618225) /locus_tag="Acear_1522" /EC_number="2.7.8.5" /note="COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR004570:IPR000462; KEGG: hor:Hore_11960 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; PRIAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; SPTR: B8CXC7 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase" /codon_start=1 /transl_table=11 /product="CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase" /protein_id="YP_003828094.1" /db_xref="GI:302392274" /db_xref="GeneID:9513577" /translation="MNLPNKLTLLRIILVPIFMFFLLFNSAGESAVYTRYLAVAVFSL AAVTDGLDGYIARKENLVTRFGKFIDPLADKLLISAALVALVDMGEISAWAAIIIIGR EFAITGLRVVAAADGIVISASKLGKYKTTLQIIAIIAIIINLPYSLVLLWLAVLLTVI SGLDYLWKGRKVIMPNVKGNNDAEEKNN" misc_feature complement(<1617827..1618225) /locus_tag="Acear_1522" /note="CDP-alcohol phosphatidyltransferase; Region: CDP-OH_P_transf; cl00453" /db_xref="CDD:193825" gene complement(1618222..1619550) /locus_tag="Acear_1523" /db_xref="GeneID:9513578" CDS complement(1618222..1619550) /locus_tag="Acear_1523" /EC_number="2.-.-.-" /note="COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005839:IPR005840:IPR002792:IPR013848:IPR 007197:IPR013785:IPR006638; KEGG: hor:Hore_11970 MiaB-like tRNA modifying enzyme; PFAM: protein of unknown function UPF0004 ; radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: B8CXC8 MiaB-like tRNA modifying enzyme; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: TRAM domain; radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, TIGR01125; RNA modification enzyme, MiaB family" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S12P methylthiotransferase" /protein_id="YP_003828095.1" /db_xref="GI:302392275" /db_xref="GeneID:9513578" /translation="MVAVGLVNLGCAKNQVDAEIMLGLIDEAGFKLVNDYSQAEVLIV NTCGFIGDAKEESIDTILQLAEYKKDNCKSLIVTGCLAQRHLEELEAEIPEIDGILGT GNFDKIVEVIKETLSGKSRAEVGNPEFNYHNRLPQKRIGQDYTAYLKIAEGCNNCCSY CVIPELRGKLHSREIEDIVTEAVELADQGVKEVNIIAQDITKYGSDLYGEPRLVELLT ELMKVKGIKWFRLLYAYPNDFSDELIEVMAKHERICNYIDLPIQHVDDKIRSKMRRRG TKEDILSLIRKLRDRIPGISIRTSLIVGFPGETEDEFKNLLDFVQQARFDRLGVFTYS REEGTAAAEMPDQVAEEIKEERYERIMDLQQRISLERNQEWIGREVEVLIEEIQQNED QKLAVGRTQQDAPEIDGLVYVEDVKAEPGEFIKVRIKDAYEYDLIGERVE" misc_feature complement(1618237..1619541) /locus_tag="Acear_1523" /note="ribosomal protein S12 methylthiotransferase RimO; Region: TIGR01125" /db_xref="CDD:162211" misc_feature complement(1619248..1619541) /locus_tag="Acear_1523" /note="Uncharacterized protein family UPF0004; Region: UPF0004; pfam00919" /db_xref="CDD:189770" misc_feature complement(1618474..1619109) /locus_tag="Acear_1523" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(1618552..1618557,1618645..1618647, 1618771..1618773,1618849..1618857,1618933..1618938, 1618942..1618944,1619065..1619073,1619077..1619079, 1619083..1619085,1619089..1619091)) /locus_tag="Acear_1523" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" misc_feature complement(1618234..1618425) /locus_tag="Acear_1523" /note="TRAM domain; Region: TRAM; cl01282" /db_xref="CDD:120537" gene complement(1619685..1620794) /locus_tag="Acear_1524" /db_xref="GeneID:9513579" CDS complement(1619685..1620794) /locus_tag="Acear_1524" /note="COGs: COG2768 Uncharacterized Fe-S center protein; InterPro IPR017896:IPR001450:IPR017900; KEGG: hor:Hore_20700 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8CZW3 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003828096.1" /db_xref="GI:302392276" /db_xref="GeneID:9513579" /translation="MSEVYYADMKAEDKDSNLINKLSQLFYKAGFDEMIDKEELFGIK LHFGEEGNTAFIRPVYIRRLVEEIKKAAGKPFLTDANTLYVGTRANSVDHLNTAIANG FGYSTVQAPIVIADGLQGRNVYEVEINQKHFDKVKIGSEICEADGMLSVAHVKGHELT GFGGAIKNVGMGLGSRAGKQQMHAVVTPEVEEEECITCGECSDWCPEDAFEIDEVSRL DEEKCIGCGECIVTCPTDAITPRFVDDSADDIQERIAEYTLGAVKGKEDKVGYINFVM DVTPLCDCVGWNDRNIVDDIGILASKDPVAIDQASVDLINQQAGKEDSALQCNHEPGE DKFKGVDPDLDWKAQLIHAERIGLGSREYDLVKID" misc_feature complement(1619691..1620794) /locus_tag="Acear_1524" /note="Uncharacterized Fe-S center protein [General function prediction only]; Region: COG2768" /db_xref="CDD:32630" misc_feature complement(<1620246..1620680) /locus_tag="Acear_1524" /note="Uncharacterized conserved protein [Function unknown]; Region: COG2006" /db_xref="CDD:32189" misc_feature complement(1620078..1620140) /locus_tag="Acear_1524" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" gene complement(1620831..1621391) /locus_tag="Acear_1525" /db_xref="GeneID:9513580" CDS complement(1620831..1621391) /locus_tag="Acear_1525" /EC_number="3.5.4.16" /note="COGs: COG0302 GTP cyclohydrolase I; InterPro IPR001474:IPR020602:IPR018234; KEGG: chy:CHY_0955 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: Q3ADI2 GTP cyclohydrolase 1; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase I" /protein_id="YP_003828097.1" /db_xref="GI:302392277" /db_xref="GeneID:9513580" /translation="MVDKEQIREAVGMILDAIGEDPDREGLLETPDRVARMYEEVFSG LHKDPADDLQIFFNQAHEELVLVKDISFYSMCEHHLLPFYGKAHVGYIPENGKVTGLS KLARVVDSFAKRPQLQERLTSQVADLIMKNVEARGVIVVVEAEHMCMTMRGIKKPGSL TTTSAVRGILQNDQAAREEALKLIKD" misc_feature complement(1620837..1621388) /locus_tag="Acear_1525" /note="GTP cyclohydrolase I (GTP-CH-I) catalyzes the conversion of GTP into dihydroneopterin triphosphate. The enzyme product is the precursor of tetrahydrofolate in eubacteria, fungi, and plants and of the folate analogs in methanogenic bacteria. In...; Region: GTP_cyclohydro1; cd00642" /db_xref="CDD:29763" misc_feature complement(order(1620855..1620863,1620867..1620869, 1620876..1620881,1620894..1620902,1620906..1620914, 1620918..1620923,1620936..1620941,1620948..1620956, 1620993..1620995,1621023..1621025,1621032..1621034, 1621038..1621046,1621074..1621076,1621083..1621091, 1621101..1621103,1621107..1621109,1621113..1621115, 1621134..1621136,1621140..1621142,1621146..1621151, 1621158..1621163,1621173..1621175,1621179..1621181, 1621185..1621196,1621200..1621211,1621221..1621223, 1621227..1621229,1621257..1621259,1621272..1621274, 1621281..1621283,1621293..1621295,1621299..1621304, 1621308..1621316,1621320..1621322,1621326..1621328, 1621332..1621334,1621338..1621343,1621350..1621352, 1621362..1621364,1621371..1621376,1621383..1621388)) /locus_tag="Acear_1525" /note="homodecamer interface [polypeptide binding]; other site" /db_xref="CDD:29763" misc_feature complement(1620837..1621364) /locus_tag="Acear_1525" /note="GTP cyclohydrolase I; Provisional; Region: PLN03044" /db_xref="CDD:178607" misc_feature complement(order(1620936..1620938,1620948..1620950, 1620954..1620956,1621035..1621043,1621074..1621076, 1621086..1621091,1621095..1621097,1621155..1621160, 1621164..1621166,1621284..1621286,1621293..1621295)) /locus_tag="Acear_1525" /note="active site" /db_xref="CDD:29763" misc_feature complement(order(1620948..1620950,1620954..1620956, 1621155..1621160,1621164..1621166)) /locus_tag="Acear_1525" /note="putative catalytic site residues [active]" /db_xref="CDD:29763" misc_feature complement(order(1620948..1620950,1621155..1621160, 1621164..1621166)) /locus_tag="Acear_1525" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:29763" misc_feature complement(order(1620867..1620881,1620885..1620893, 1620978..1620980,1620984..1620986,1621002..1621004, 1621011..1621013)) /locus_tag="Acear_1525" /note="GTP-CH-I/GFRP interaction surface; other site" /db_xref="CDD:29763" gene 1621631..1622266 /locus_tag="Acear_1526" /db_xref="GeneID:9513581" CDS 1621631..1622266 /locus_tag="Acear_1526" /note="KEGG: dae:Dtox_1693 hypothetical protein; SPTR: C1T9S3 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828098.1" /db_xref="GI:302392278" /db_xref="GeneID:9513581" /translation="MKKYEQNNFIIARKKARKKFKEIPPQELAANSGADFQSDNNRLR LRFLADDYFIDYPEGEIYLADKQDKEIDLKIQILILYYLNKASGAQVKDELISYREIP HGGNQYYDIFKRRAIDPLVNKFGHQPEKLIEAGKKLNGETADTGDYSITIPVLPKVPM TLIIWAGDDELPPSGNILLNKSILGYLSAKDIYVAAGITVKVLTKTAENLE" misc_feature 1621703..1622239 /locus_tag="Acear_1526" /note="Domain of unknown function (DUF3786); Region: DUF3786; pfam12654" /db_xref="CDD:193131" gene complement(1622301..1622948) /locus_tag="Acear_1527" /db_xref="GeneID:9513582" CDS complement(1622301..1622948) /locus_tag="Acear_1527" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828099.1" /db_xref="GI:302392279" /db_xref="GeneID:9513582" /translation="MEIIILLVILMGLGIVEFSTLKAILLRVVQFGNKYSGFLSLLTS LILAYATWRYVVMGRKTLDFMRESFKKEYEEDIKFMFIQKPKEEIVDEFVTNEQLIKG DLEDDALTVNEDETYLYINIFNSGRRLVSHIQLIYQVRIINPWEEALVENEEIKTVIP VTIQPNDYISFPLVQVLNLPQVEIVIESLRSFNGLGKEQLLNSPQRKLEYKNKNS" gene complement(1623110..1623316) /locus_tag="Acear_1528" /pseudo /db_xref="GeneID:9513583" gene complement(1623370..1623663) /locus_tag="Acear_1529" /db_xref="GeneID:9513584" CDS complement(1623370..1623663) /locus_tag="Acear_1529" /note="KEGG: hor:Hore_11980 hypothetical protein; SPTR: B8CXC9 Putative uncharacterized protein; PFAM: Predicted metal-binding protein (DUF2103)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828100.1" /db_xref="GI:302392280" /db_xref="GeneID:9513584" /translation="MSGKYRINKIKQEHTIIEDVLPLLEDLAALKSIKSIIPGRINQR GGSGMQPYLQLKYNTPTGIKVLAKTSSSIQEVFVVTDYPDKTMRLMKENGLVK" misc_feature complement(1623412..1623642) /locus_tag="Acear_1529" /note="Predicted metal-binding protein (DUF2103); Region: DUF2103; cl01651" /db_xref="CDD:154519" gene complement(1623799..1625169) /locus_tag="Acear_1530" /db_xref="GeneID:9513585" CDS complement(1623799..1625169) /locus_tag="Acear_1530" /EC_number="4.3.2.1" /note="COGs: COG0165 Argininosuccinate lyase; InterProIPR008948:IPR009049:IPR000362:IPR020557:IPR 003031; KEGG: pca:Pcar_2418 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: Q3A1V0 Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccinate lyase" /codon_start=1 /transl_table=11 /product="argininosuccinate lyase" /protein_id="YP_003828101.1" /db_xref="GI:302392281" /db_xref="GeneID:9513585" /translation="MKLWGGRFEAETDQLVEEYTSSIGFDQRLYKYDIQGSIAHVKML AECGILTYEERDQIIAGLEEILEEIEAGDFEFEIGLEDIHMNIEQRLIDKIGSVGGKL HTARSRNDQVALDMRLYLRDQIEAIQALIEKLQQVLLELAEENIDIIMPGYTHLQRAQ PVRVAHHLLAYYYKLKRDYDRLEDVYKRTNVLPLGAGALAGTTFDIDRQFVADELGFD GVSQNSLDTVSDRDFVIEFLAASSTLMMHLSRFSEELVLWTSQEFDFVDIDDAFCTGS SIMPQKKNPDVPELIRGKTGRIYGHLMQLLTVMKGLPLAYNKDMQEDKEGLFDTVDTL KGALELFARMLAKTSFNQIKLEATAEDGFTNATEVADYLVEQGLPFREAHEVVGKTVL YCINEDKKLSELELEEWQNFSDRFSDDIYQKIDIETAVDARDSVGGPAKEEIKRAITA EKKECQ" misc_feature complement(1623802..1625169) /locus_tag="Acear_1530" /note="argininosuccinate lyase; Provisional; Region: PRK00855" /db_xref="CDD:179143" misc_feature complement(1623808..1625106) /locus_tag="Acear_1530" /note="Argininosuccinate lyase (argininosuccinase, ASAL); Region: Argininosuccinate_lyase; cd01359" /db_xref="CDD:176463" misc_feature complement(order(1624198..1624203,1624207..1624209, 1624216..1624218,1624222..1624224,1624303..1624305, 1624312..1624314,1624318..1624320,1624342..1624344, 1624348..1624350,1624477..1624479,1624705..1624710, 1624834..1624836,1624843..1624851,1624918..1624920, 1624924..1624926,1625092..1625094,1625104..1625106)) /locus_tag="Acear_1530" /note="active sites [active]" /db_xref="CDD:176463" misc_feature complement(order(1623829..1623831,1623853..1623867, 1623871..1623873,1624009..1624011,1624018..1624020, 1624027..1624032,1624057..1624059,1624072..1624074, 1624153..1624155,1624162..1624164,1624195..1624197, 1624204..1624206,1624213..1624224,1624246..1624254, 1624258..1624260,1624267..1624275,1624279..1624296, 1624300..1624305,1624312..1624314,1624318..1624326, 1624330..1624341,1624357..1624359,1624381..1624383, 1624390..1624395,1624408..1624413,1624420..1624425, 1624429..1624434,1624441..1624443,1624453..1624455, 1624462..1624464,1624474..1624476,1624480..1624485, 1624492..1624506,1624546..1624548,1624555..1624557, 1624561..1624575,1624606..1624608,1624618..1624620, 1624627..1624632,1624639..1624641,1624657..1624662, 1624672..1624674,1624690..1624713,1624858..1624863, 1624870..1624872,1624879..1624881)) /locus_tag="Acear_1530" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:176463" gene complement(1625150..1625671) /locus_tag="Acear_1531" /db_xref="GeneID:9513586" CDS complement(1625150..1625671) /locus_tag="Acear_1531" /note="InterPro IPR016181:IPR000182; KEGG: cce:Ccel_2916 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: B8I8B0 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family" /codon_start=1 /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_003828102.1" /db_xref="GI:302392282" /db_xref="GeneID:9513586" /translation="MKFKVKKAEMEDSNLVFRLTKRAFQHYNVPSRSPTTPALSETIE DVEEDIKEKNILIAYLNDKPVGSVRFYSSNGKDFYLSRLGVIGEYQNQGVGQRLVAEV ERWAKAQGGERITLYSAYSSKKLMEFYQKLGYEIIEIRDDPDYTRAVIQKELDQVDAG KIKEEQDYEAMGW" misc_feature complement(1625321..1625509) /locus_tag="Acear_1531" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cd04301" /db_xref="CDD:173926" misc_feature complement(order(1625384..1625389,1625417..1625425)) /locus_tag="Acear_1531" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene complement(1625703..1626911) /locus_tag="Acear_1532" /db_xref="GeneID:9513587" CDS complement(1625703..1626911) /locus_tag="Acear_1532" /EC_number="6.3.4.5" /note="COGs: COG0137 Argininosuccinate synthase; InterPro IPR001518:IPR014729:IPR018223; KEGG: hor:Hore_02900 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: B8D1H4 Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase" /codon_start=1 /transl_table=11 /product="argininosuccinate synthase" /protein_id="YP_003828103.1" /db_xref="GI:302392283" /db_xref="GeneID:9513587" /translation="MDKQNINKIVLAYSGGLDTSVAVKWLQDKYDAEVVAFAADVGQN EDLEPVKEKALETGAIKAYVEDLKEEFLTDYAFKGLKAGAKYEAKYPLATAYSRPLIA KKMIEVAKQEGADAVAHGCTGKGNDQVRFDVSFQALAPGIEIVAPLREWEFGSRQEQI DYADKEGISVGATKESPYSIDRNLWGISIECGVLEDPAEEPPADVYQITTDPEEAPDE PEYVEVTFEQGEPVALNGTEYGPVELVDKLNGIAGKHGVGRVDMVENRLVGIKSREIY EAPAATVLLTAHRHLEDLVLDRETAHYKKVIAEKYAELTYYGQWFSPLKDALDAFVES TQKYVSGTIKLKLYKGNATVVGRESDESLYQENLATYEKSDTFNHDAAVGFIELFGLP LKVDSTIHKE" misc_feature complement(1625727..1626893) /locus_tag="Acear_1532" /note="Argininosuccinate synthase [Amino acid transport and metabolism]; Region: ArgG; COG0137" /db_xref="CDD:30486" misc_feature complement(1625736..1626887) /locus_tag="Acear_1532" /note="Argininosuccinate synthase. The Argininosuccinate synthase is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate . In...; Region: Argininosuccinate_Synthase; cd01999" /db_xref="CDD:30186" misc_feature complement(order(1626372..1626377,1626519..1626521, 1626552..1626554,1626618..1626620,1626783..1626785, 1626795..1626797,1626801..1626803,1626855..1626857, 1626876..1626878)) /locus_tag="Acear_1532" /note="ANP binding site [chemical binding]; other site" /db_xref="CDD:30186" misc_feature complement(order(1625964..1625966,1626084..1626086, 1626120..1626122,1626342..1626344,1626348..1626350, 1626369..1626377,1626522..1626524,1626534..1626536, 1626627..1626632,1626642..1626644)) /locus_tag="Acear_1532" /note="Substrate Binding Site II [chemical binding]; other site" /db_xref="CDD:30186" misc_feature complement(order(1626531..1626539,1626546..1626551)) /locus_tag="Acear_1532" /note="Substrate Binding Site I [chemical binding]; other site" /db_xref="CDD:30186" gene complement(1626976..1627917) /locus_tag="Acear_1533" /db_xref="GeneID:9513588" CDS complement(1626976..1627917) /locus_tag="Acear_1533" /EC_number="2.1.3.3" /note="COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR006130:IPR002292:IPR006132:IPR006131; KEGG: cth:Cthe_1869 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; PRIAM: Ornithine carbamoyltransferase; SPTR: A3DGL1 Ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase" /codon_start=1 /transl_table=11 /product="ornithine carbamoyltransferase" /protein_id="YP_003828104.1" /db_xref="GI:302392284" /db_xref="GeneID:9513588" /translation="MDHLLTISDLTDEEIKQIFSLTNKLKEQNKQGIDHPVLAGQTLG MIFQKSSTRTRVSFETGMFQLGGHGLFLSSDDIQLGRGETISDTAKTLSRYVNGIMIR TYDHSDVEELAAAGSIPVINGLTDLLHPCQVLADLYTIQEKLGSLQDKKLTYIGDGNN MSHSLLIGATKVGMDISLAVPNAYRPDEDIVATADKQAEESGSQIEILTDPLQAAENA DAVYTDVWASMGDEDEAEERMKAFKDYQVNEEVMNAAQNKAVFLHCLPAYRGKEVTAG VIDGPQSVVFDEAENRMHVQKAIMVELMADQAKKEDL" misc_feature complement(1627006..1627917) /locus_tag="Acear_1533" /note="ornithine carbamoyltransferase; Provisional; Region: PRK00779" /db_xref="CDD:179122" misc_feature complement(1627489..1627911) /locus_tag="Acear_1533" /note="Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Region: OTCace_N; pfam02729" /db_xref="CDD:190401" misc_feature complement(1627009..1627476) /locus_tag="Acear_1533" /note="Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Region: OTCace; pfam00185" /db_xref="CDD:189438" gene complement(1628827..1632030) /locus_tag="Acear_1534" /db_xref="GeneID:9513589" CDS complement(1628827..1632030) /locus_tag="Acear_1534" /note="COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR016185:IPR005480:IPR006275:IPR011761:IPR 005481:IPR005479:IPR011607:IPR013817:IPR013816:IPR005483; KEGG: cth:Cthe_1868 carbamoyl-phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; SPTR: A3DGL0 Carbamoyl-phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; carbamoyl-phosphate synthase, large subunit" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthase large subunit" /protein_id="YP_003828105.1" /db_xref="GI:302392285" /db_xref="GeneID:9513589" /translation="MPKQEGVEKVLVIGSGPIVIGQAAEFDYSGTQACKALKEEGIEV VLVNSNPATIMTDTDIADQVYVEPITIDFVEEVIKKEEPDGILPTLGGQTGLNLAVEL AEAGILEETGIELLGTSLDSIQRAEDRDRFRATMEEIGQPVAESQIIDTLAEAKEFVA EIGFPVIIRPAYTMGGAGGGIADNSQELEDIVSRGLNNSPISQVLIEKSIAGWKEIEY EVLRDGADNCIVICNMENIDPVGIHTGDSIVVAPSQTLADLEYQMLRSASLEIIKELG IEGGCNVQFALHPDSLDYYVIEVNPRVSRSSALASKATGYPIARVAAKIATGLRLDEI ENSITQETTACFEPALDYVVSKIPRWPFDKFSSADRDLSTQMKATGEVMSIGRNFEES IMKAIESLDSDLDLIAADFSQLSRKELITKLEMPTDERLFVIIEALQRGFDLMEIVEL TGIDKFFVFKLAYLVEQADELKESSLDDLEADRLEELKRNGFSDAYLAKLLQAPEEEV AAKRKELGVKAVFKMVDTCAAEFEAATPYYYSTYEREDETFDSEKDSVLVVGSGPIRI GQGIEFDYCSVHSVKALSEEGMESLIINNNPETVSTDYDTSDKLFFEPITVEHVLNII DREDPDGVILQFGGQTSVNLAQLLAERGVEVLGTPVKSMDLAEDRDKFTQVLDELNID YPAGTTATSREEALAIADDLGYPLLVRPSYVLGGRAMQVVYKEEELVEYMELAVKVSP DHPVLIDRYIPGKEVEIDAIADGNNAVIPGIMEHIEKAGVHSGDSMAVYPPQTLTDQQ IDRIVEDTIKIVKRLEMNGLVNIQFVIDKEGKPYVLEVNPRASRTIPILSKVTGVPMV KLATKTMLGKKLPELGYDYGLVPESDLITVKSPVFSFEKITDLDVFLGPEMKSTGEVM GTDTTFSKALYKSLLSTGFNLPQGGKVLLSVADRDKEEAIEVAEEFVELGFSLVGTLN TAQRISEAGIEIESISKQNDKKDVFDIIKENQVDLVVNTPTRGKIAARTGFQLRRTAV EYGLTCLTSLSTVKAFLKILKQDLNNLQVLSLDEYLA" misc_feature complement(1628833..1632030) /locus_tag="Acear_1534" /note="carbamoyl phosphate synthase large subunit; Reviewed; Region: carB; PRK05294" /db_xref="CDD:179998" misc_feature complement(1631665..1632009) /locus_tag="Acear_1534" /note="Carbamoyl-phosphate synthase L chain, N-terminal domain; Region: CPSase_L_chain; pfam00289" /db_xref="CDD:189488" misc_feature complement(1631029..1631649) /locus_tag="Acear_1534" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" misc_feature complement(1630405..1630776) /locus_tag="Acear_1534" /note="Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Region: CPSase_L_D3; pfam02787" /db_xref="CDD:190426" misc_feature complement(1630045..1630371) /locus_tag="Acear_1534" /note="Carbamoyl-phosphate synthase L chain, N-terminal domain; Region: CPSase_L_chain; pfam00289" /db_xref="CDD:189488" misc_feature complement(1629418..1630029) /locus_tag="Acear_1534" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" misc_feature complement(1628887..1629216) /locus_tag="Acear_1534" /note="MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate...; Region: MGS-like; cl00245" /db_xref="CDD:185860" misc_feature complement(order(1629001..1629003,1629112..1629117, 1629121..1629123,1629181..1629183,1629199..1629201)) /locus_tag="Acear_1534" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:29632" gene complement(1632042..1633121) /locus_tag="Acear_1535" /db_xref="GeneID:9513590" CDS complement(1632042..1633121) /locus_tag="Acear_1535" /EC_number="6.3.5.5" /note="COGs: COG0505 Carbamoylphosphate synthase small subunit; InterProIPR002474:IPR006274:IPR017926:IPR000991:IPR 001317:IPR011702:IPR006220; KEGG: amt:Amet_4211 carbamoyl phosphate synthase small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; SPTR: A6TVS3 Carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthase small subunit" /protein_id="YP_003828106.1" /db_xref="GI:302392286" /db_xref="GeneID:9513590" /translation="MKAILALEDGTYFEGESFGAAGEVTGELVFNTSMTGYQEVMTDP SYRGQIVTMTYPLIGNYGINDEDNESDEPQVSGFVVRESCNYPSNWRCQKTDEEFLKE NNVIGIQNIDTRALTKHIRNQGMMQAVISTEDLNPNSLVQKAKESSLSSELVQEVTVG ESYFLQADFQSKYHIAVLDLGVKENMLDSFKQCNADLTVLPADTTAEEILELNPDGLF ISNGPGDPKDNPEVIAEVEKLVGKLPLFGICFGHQILALALGADTYKLKFGHRGANHP VKNLSTGQVYITSQNHGYAVKEESLPEEMIVTHKNLNDDTVEGMKHTKLPIFSVQYHP EAAPGPHDSDFLFNKFIELIVDSAA" misc_feature complement(1632060..1633121) /locus_tag="Acear_1535" /note="carbamoyl phosphate synthase small subunit; Reviewed; Region: PRK12564" /db_xref="CDD:183597" misc_feature complement(1632729..1633121) /locus_tag="Acear_1535" /note="Carbamoyl-phosphate synthase small chain, CPSase domain; Region: CPSase_sm_chain; pfam00988" /db_xref="CDD:144543" misc_feature complement(1632069..1632599) /locus_tag="Acear_1535" /note="Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II; Region: GATase1_CPSase; cd01744" /db_xref="CDD:153215" misc_feature complement(order(1632117..1632119,1632123..1632125, 1632375..1632377)) /locus_tag="Acear_1535" /note="catalytic site [active]" /db_xref="CDD:153215" misc_feature complement(order(1632096..1632101,1632105..1632110, 1632186..1632188,1632267..1632269,1632273..1632275, 1632294..1632296,1632300..1632302)) /locus_tag="Acear_1535" /note="subunit interface [polypeptide binding]; other site" /db_xref="CDD:153215" gene complement(1633258..1634739) /locus_tag="Acear_1536" /db_xref="GeneID:9513591" CDS complement(1633258..1634739) /locus_tag="Acear_1536" /note="COGs: COG0591 Na+/proline symporter; InterPro IPR011851:IPR019900:IPR001734; KEGG: dsa:Desal_1778 sodium/proline symporter; PFAM: Na+/solute symporter; SPTR: C6BTR0 Sodium/proline symporter; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily" /codon_start=1 /transl_table=11 /product="sodium/proline symporter" /protein_id="YP_003828107.1" /db_xref="GI:302392287" /db_xref="GeneID:9513591" /translation="MIQIQTLLAFIVYFIFMMSIGIYFYRRTVDVEDYLLGGRGLGSW VTALSAQASDMSGWLLMGLPGAVYLGGVEQAWIAIGLFVGTYLNWKFVSSRLRVYTQK TDAITLASFFEERFKDPTGLLRIISALITLLFFTIYASSGLVAAGKLFESIFNIQYAA AVLIGTFVIMLYTFLGGFSAVCWTDLVQGLLMVSTIIIVPILAYNVVGGFEGVKTAAL AKGASLSLLPADSSISMMGIISAVAWGLGYFGQPHILARFMGIDSVKKIPKAMRIAVI WVFVSLGGAVIIGLISIPMFENLSGGDQEKVFIYMIDKLFNPWVSGILLAAILAAIMS TIDSQLLVLSSTITEDFYKKIKKDTSEQELIYVGRGSVLVTSLIALFLALNPNNTVLG LVAYAWGGFGAAFGPIVLFALFSKNTSWKSALAGMIMGTIVLIVWKEFDLGAVFFGNS LYEIVPGFIVNVLTISIVNLVAGEESAGILTEFNEVAEEMNNA" misc_feature complement(1633309..1634739) /locus_tag="Acear_1536" /note="Predicted symporter [General function prediction only]; Region: DhlC; COG4147" /db_xref="CDD:33899" misc_feature complement(1633273..1634730) /locus_tag="Acear_1536" /note="Sodium:solute symporter family; Region: SSF; cl00456" /db_xref="CDD:186007" gene complement(1634838..1635221) /locus_tag="Acear_1537" /db_xref="GeneID:9513592" CDS complement(1634838..1635221) /locus_tag="Acear_1537" /note="KEGG: cth:Cthe_3174 hypothetical protein; SPTR: A3DK90 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828108.1" /db_xref="GI:302392288" /db_xref="GeneID:9513592" /translation="MNKLVIGITIFLILLLGLSVYGYREVVNSAEPILDKLNKLETEI QNEDWQTAKTTNEALQDRWEKTQNLWTPLVDHSRVDGLENSLIKIKKAVNEEEKTEAL LEIAVSRRLVQNVPNTQKINFKNIF" gene complement(1635243..1635917) /locus_tag="Acear_1538" /db_xref="GeneID:9513593" CDS complement(1635243..1635917) /locus_tag="Acear_1538" /note="COGs: COG2323 membrane protein; InterPro IPR007353; KEGG: cth:Cthe_3175 hypothetical protein; PFAM: protein of unknown function DUF421; SPTR: A3DK91 Putative uncharacterized protein; PFAM: protein of unknown function (DUF421)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828109.1" /db_xref="GI:302392289" /db_xref="GeneID:9513593" /translation="MLIVIIRTVILYLAVLVVLRLMGKRQIGELQPFDLAVTIMVSEL AAMPMQNTDVPLINSLLPISLILILQIYISVINTKSFKAREIVCGSPDILIENGQLNE EELRKNRISIHELLEELRVKGYHNLAEIEFAFIETNGQVSVIPKSQNRPVTPEDLEIE TDYEGVAYSLIVDGKVYQPNLDEVGLSKDWLKNELSNFGINDLSDVLFANIDSSGNIF YQLYDS" misc_feature complement(1635246..1635917) /locus_tag="Acear_1538" /note="Protein of unknown function (DUF421); Region: DUF421; cl00990" /db_xref="CDD:193999" gene complement(1635998..1637146) /locus_tag="Acear_1539" /db_xref="GeneID:9513594" CDS complement(1635998..1637146) /locus_tag="Acear_1539" /EC_number="3.5.1.25" /note="COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase; InterPro IPR011059:IPR003764:IPR006680; KEGG: cbi:CLJ_B3061 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; PRIAM: N-acetylglucosamine-6-phosphate deacetylase; SPTR: C3L2N8 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine-6-phosphate deacetylase" /protein_id="YP_003828110.1" /db_xref="GI:302392290" /db_xref="GeneID:9513594" /translation="MKCIIKADLIYTPMKSKAQYLVIADSTVLKITDTLAEYDLSNFK LVDYSGCQIIPGLIDTHIHGGAGVEVMEASLASVKRLSHYGFKTGVTSLLPTTLAAPK SLLLDTLEIIKEAQTSCSNIIGAHLEGPFINPKQAGAQKKEFITAPNRGYVDRLLTDY KDLIKIVSLAPEVDGGLEMVDYLEQQGITTSVAHSAASLEVMQQAFSYGLSCATHIFN KMNSLHHRQPGTVGAVLNNDSCSCEVIADGIHIHPEVIGLLLKIKGVDKVILISDSMQ AAGMGAGKYNLGNQKVTVDKQGRARLTDGTLAGSTLKLIDAVANVVEFTRLNFSQALK LATVNPAYKLGLERKGRLKADYVADFVVVDEELEVLATYKKGSKVYPG" misc_feature complement(1636019..1637140) /locus_tag="Acear_1539" /note="N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to...; Region: NagA; cd00854" /db_xref="CDD:30034" misc_feature complement(order(1636226..1636228,1636328..1636330, 1636397..1636399,1636490..1636495,1636502..1636504, 1636565..1636567,1636730..1636732,1636763..1636765, 1636958..1636960,1636964..1636966)) /locus_tag="Acear_1539" /note="active site" /db_xref="CDD:30034" misc_feature complement(order(1636364..1636366,1636373..1636378, 1636382..1636387,1636391..1636402,1636439..1636444, 1636463..1636465,1636469..1636474,1636478..1636480, 1636496..1636498)) /locus_tag="Acear_1539" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:30034" gene 1637368..1638279 /locus_tag="Acear_1540" /db_xref="GeneID:9513595" CDS 1637368..1638279 /locus_tag="Acear_1540" /note="COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127:IPR006128:IPR006129; KEGG: aoe:Clos_2136 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: A8MIP0 Periplasmic solute binding protein; PFAM: Periplasmic solute binding protein family" /codon_start=1 /transl_table=11 /product="periplasmic solute binding protein" /protein_id="YP_003828111.1" /db_xref="GI:302392291" /db_xref="GeneID:9513595" /translation="MFNLNRAFNLVILFLVVGLMLSIVNPVMGQETSTAYVSFYPLYD AATKIGGNQIDIKLVIPNGAEVHSYKPSPQKIAQLETADIFFYNGVGLESWADKAVQN LKGSKVKTVNLSKSVDLLPLADHHNKHHNDPHIWLDPLNMKMIGEVITEEFCRLDPEH KEIYQQNFDQFAQQIDQLHKEYKTVLADKQQKYILVSHSAFGYLTNRYGLEQISVTGI APHEEPSPNTLARLTQKANQYNLNYIFRETLSSPKTVNALAQEADLEILPLNPIAGLT ETEQQNNEDYFSLMRQNLDNLKKAVKK" misc_feature 1637473..1638273 /locus_tag="Acear_1540" /note="Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor...; Region: AdcA; cd01017" /db_xref="CDD:29736" misc_feature 1637476..1638267 /locus_tag="Acear_1540" /note="Periplasmic solute binding protein family; Region: SBP_bac_9; pfam01297" /db_xref="CDD:189932" misc_feature order(1637566..1637568,1637767..1637769,1637959..1637961, 1638184..1638186) /locus_tag="Acear_1540" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:29736" gene 1638279..1638974 /locus_tag="Acear_1541" /db_xref="GeneID:9513596" CDS 1638279..1638974 /locus_tag="Acear_1541" /note="COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: amt:Amet_1173 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A6TMG3 ABC transporter related; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003828112.1" /db_xref="GI:302392292" /db_xref="GeneID:9513596" /translation="MDKVITVNNLSFAYEEEPILKNVNLQVNRGDFLAFIGPNGSGKS TLLKLLLGLLTADQGEIKLLETEINDFTDWTKIGYIPQNVRNFNNSFPATVREVIGSN LYSEMNFFKLLTAELEERIDKALKLVNMLDYKDSLIGNLSGGQQQRIFIARTLVTEPE IIFLDEPLTGVDINAQNELYELLTKLNQELEITVTMVSHDLNSIYRYTDRIISVKNCQ LVDKKQLREGEIC" misc_feature 1638282..1638938 /locus_tag="Acear_1541" /note="ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]; Region: CbiO; COG1122" /db_xref="CDD:31319" misc_feature 1638297..1638926 /locus_tag="Acear_1541" /note="ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-...; Region: ABC_Metallic_Cations; cd03235" /db_xref="CDD:72994" gene 1638968..1639816 /locus_tag="Acear_1542" /db_xref="GeneID:9513597" CDS 1638968..1639816 /locus_tag="Acear_1542" /note="COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626:IPR002229; KEGG: amt:Amet_1174 ABC transporter; PFAM: ABC transporter; SPTR: A6TMG4 ABC transporter; PFAM: ABC 3 transport family" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003828113.1" /db_xref="GI:302392293" /db_xref="GeneID:9513597" /translation="MLEILSYSFMQRAFIVGNIIGVICPLIGTFLVLKRLALIGHTLS HVALAGIALGMFLGVYPLYMALIISIMAALSIEKLRQNYKDYAELSLSIILAAGLGIA TILIGLINGNSGIFSYLFGSISLVTNQDLFTVLPLGIIIIGIIIYFYYGFFAIAFNEE EARLAGIPVKGLNILFMILVSVTVSLSMRIIGGLLVSSLITLPVATGLQLATSFKDTI KYSIIFSLLAVNLGLIISFYQDLAPGGTIILISVVYLLGALGYKKIKQTLHNSQENRL DSDKKI" misc_feature 1638995..1639735 /locus_tag="Acear_1542" /note="Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+. PBP-dependent ABC transporters consist...; Region: TM_ABC_iron-siderophores_like; cd06550" /db_xref="CDD:119348" misc_feature order(1639049..1639051,1639061..1639069,1639403..1639408, 1639412..1639420,1639424..1639429,1639433..1639450, 1639454..1639462,1639586..1639588,1639607..1639609) /locus_tag="Acear_1542" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119348" misc_feature order(1639064..1639066,1639070..1639072,1639085..1639087, 1639229..1639231,1639235..1639240,1639247..1639252, 1639259..1639264,1639271..1639273,1639280..1639285, 1639289..1639291,1639313..1639318,1639325..1639327, 1639553..1639555,1639700..1639702,1639709..1639714, 1639721..1639723,1639730..1639735) /locus_tag="Acear_1542" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119348" misc_feature order(1639289..1639291,1639355..1639357,1639529..1639531, 1639541..1639543,1639676..1639678,1639691..1639693) /locus_tag="Acear_1542" /note="putative PBP binding regions; other site" /db_xref="CDD:119348" gene 1640345..1641949 /locus_tag="Acear_1543" /db_xref="GeneID:9513598" CDS 1640345..1641949 /locus_tag="Acear_1543" /note="InterPro IPR004995; KEGG: pth:PTH_1840 hypothetical protein; PFAM: GerA spore germination protein; SPTR: A5D162 Hypothetical membrane protein; PFAM: Bacillus/Clostridium GerA spore germination protein" /codon_start=1 /transl_table=11 /product="GerA spore germination protein" /protein_id="YP_003828114.1" /db_xref="GI:302392294" /db_xref="GeneID:9513598" /translation="MWQQLKKWLQDKYIAQQNEKEDTADMFFNSLAENEAVLKKRLDK IDDVRFRDIKPADGDNNQLKMTLVYITDLVDKEIINNHILKPILSHKQNSDLEALIED KDAEVLKNQIIDAEDMTKLDKIEKAITDLMAGKSILLIDQTPYVFSIATQGWEERSVP DPVVERTVRGPNVSFMENIKTNTGLIRRRIKDDNLKIEPFTKGRQTKTKINVIYLDGV ANQKIVKEVKKRIESIEVAGINSAQHLLELIEDNPLSPFETVYLTQRPDIISAGLLEG RVAILIDGTPTVLTVPKLFMENLISPEDYYSRIYYTLVIRIIRFSAFLVAATLPAFYI SLLGFHQEVLPLTLVNSIYTAREGVPFPIAVEMIVYGLFFEGIREAGARIPTGLGSSV TIVGALILGQAAISAGFLSPDGVIIGSLTGIAVFLTPTLEFSNTLLILRLLFVGAASI AGFYGMTILFLLVTMHLTSLRSFGVPYTKPIAPLQLTDLRDFFIRVPYLLMNTRPESL ENEDQTRQDNQPSRRFFFKYKLTEDD" misc_feature 1640444..1641868 /locus_tag="Acear_1543" /note="Bacillus/Clostridium GerA spore germination protein; Region: GerA; pfam03323" /db_xref="CDD:190601" gene 1641966..1643063 /locus_tag="Acear_1544" /db_xref="GeneID:9513599" CDS 1641966..1643063 /locus_tag="Acear_1544" /note="InterPro IPR004761; KEGG: mta:Moth_2041 spore germination protein; PFAM: spore germination protein; SPTR: Q2RGV2 spore germination protein; TIGRFAM: spore germination protein; PFAM: spore germination protein; TIGRFAM: spore germination protein (amino acid permease)" /codon_start=1 /transl_table=11 /product="spore germination protein" /protein_id="YP_003828115.1" /db_xref="GI:302392295" /db_xref="GeneID:9513599" /translation="MKTRISTYQTALLLVVTILATSIVFLPELIITRAKQDAWIAIIL LIGFMGVISLIYTLLTRRMGSTDLINFNRRVLGRVLTIPLGLGLIAYFLISSGVILRE TSEIMVAVYMPETPLWFFILTGLLTAAAFVYYGLEVMARSFEILFYLYLVAYLFAFLI VIKDLSLSFLRPMLAEGIKPILQGAYPGLLFFGELFLILLFAPQMSKQNQAHKSLLGA IGIIGTLFLIAVISSLALFGAELASNLTFPVLSVHRYAEALGFLERLDPLFIFYWIGS GIIKTAIFFYGGIYIGQKLLGLSTYYALIPFALPPVFYTAFYYFQNVAEIAEFLTTAI PYYLFIQVFYPLLLLIISLIRGIKAEEGRDR" misc_feature 1641975..1642925 /locus_tag="Acear_1544" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene 1643060..1644151 /locus_tag="Acear_1545" /db_xref="GeneID:9513600" CDS 1643060..1644151 /locus_tag="Acear_1545" /note="InterPro IPR004761; KEGG: gwc:GWCH70_2166 spore germination protein; PFAM: spore germination protein; SPTR: C5D3G1 spore germination protein; TIGRFAM: spore germination protein; PFAM: spore germination protein; TIGRFAM: spore germination protein (amino acid permease)" /codon_start=1 /transl_table=11 /product="spore germination protein" /protein_id="YP_003828116.1" /db_xref="GI:302392296" /db_xref="GeneID:9513600" /translation="MKTRISTYQATLLLVVTVLATSIVFLPELVITRAKQDAWLAGIL LISFAVINAVIYILLTRRMGRTDLINFNRQVLGNLLTIPVGLGLIAYFLISSGIVIRD TAEIMIGVYMPETPLWFFILTTLLTAAAFVYYGLEVMARSFEIIFYFFIITFLVIFLM IVPDLSTAFIQPVLGDGIAPVLKGAYPGLRFFGEFFLILILAPQLAKQKEAYKSLLGA IIILGILFLMTILSALMLFGAELASELTFPLLSVHRYAEALGFLERLDPLFIFYWVGG NIFKAAIFIYGAVYTGQKLLGLSTYYILIPFTLPIIFYFGFYYFQNVAEISKFIMSTI PYYLAIQTFYPLVLLIISILRRIQTNETS" misc_feature 1643069..1644019 /locus_tag="Acear_1545" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene 1644138..1645355 /locus_tag="Acear_1546" /db_xref="GeneID:9513601" CDS 1644138..1645355 /locus_tag="Acear_1546" /note="InterPro IPR008844; KEGG: nth:Nther_0875 germination protein, Ger(X)C family; PFAM: spore germination B3 GerAC family protein; SPTR: B2A894 Germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family" /codon_start=1 /transl_table=11 /product="germination protein, Ger(x)C family" /protein_id="YP_003828117.1" /db_xref="GI:302392297" /db_xref="GeneID:9513601" /translation="MKPANLKKTVILLLILSLAITLSGCWSAREFDTLALVKGVGIDL AEKEDRIKFTIQMISPNPQQGGGQPGGGGGQAGQSSQFWTTSTTGYSIFEANRNLVKT IGRKPFYPHTEVYIIGEELARQGIKPYIDFFNRDPEIRRRAYIIIAKGEAEDILKAPH GVETVPILAVKQIIDGQSISGSIYSTNLREFTVSALSNTTDPVTAAVELRPGGPEEEG EENKDNLIYINGAAMFKGDKLVDWLTRKETRGLNWVQKPSEIIGPVLIKAPDEDKRIG IEVLKATSSVEPELEDGEFKMKVEITVEGNISEAQIRKYDITKVGNITHLDQRFAQVI KNEIINGLQKSQQYQADIFGFGETIRNKYPQEFKEKQDNWDQIYSKLPVTIEVKSNIR RPGMVKEGIGTYK" misc_feature 1644207..1645331 /locus_tag="Acear_1546" /note="Spore germination B3/ GerAC like, C-terminal; Region: Spore_GerAC; cl05194" /db_xref="CDD:195053" gene 1645368..1645826 /locus_tag="Acear_1547" /db_xref="GeneID:9513602" CDS 1645368..1645826 /locus_tag="Acear_1547" /note="KEGG: nth:Nther_2306 hypothetical protein; SPTR: B2A8I8 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828118.1" /db_xref="GI:302392298" /db_xref="GeneID:9513602" /translation="MFNIKDKYFSGIMTGILINIPINILDYIFYLLNINQYHMWQIAA SAYFRIQDVDTVPALIVGAISDYSTAILLAITIVYLLSITGTDYFWAKGLSVGGIWWL FAFGVMLRIKIGRIDPIDAGTNLYHVSEHMLFGVLVAWIITKYGQEALAE" gene 1645871..1646866 /locus_tag="Acear_1548" /db_xref="GeneID:9513603" CDS 1645871..1646866 /locus_tag="Acear_1548" /note="KEGG: nth:Nther_0757 hypothetical protein; SPTR: B2A7P5 Putative uncharacterized protein; PFAM: protein of unknown function (DUF3231)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828119.1" /db_xref="GI:302392299" /db_xref="GeneID:9513603" /translation="MEFSDLLPDISIFKKSITTEEQISSTEAYNLWNALRARYISIET YKLYRNFVHDRDFDLLLDGHIEDFQEQITMLENLADKYKVKVPAKPSDQLQTSAHIDI ITDKLIFRRIYSDLISELYFLSRSISSTTYNDKLRRYFIDFVENHLNNYENLYKYGKT KGWTDVAPSFKTHQPGEKEQLSAGEAGHIWDHLNLRYDQVQLTRIFLDFVHDTEFKLI LEQGNKILQKQAKLLAEKATEYEVPTPEKPPASQKAKIDPEIMEDKFAYRVILKGIQE AIDSHIGAVIETIRNDKLRKLFFDLYNEEVELFNDLIEYGKMKGWTHIIPTYRKA" misc_feature 1646375..1646833 /locus_tag="Acear_1548" /note="Protein of unknown function (DUF3231); Region: DUF3231; pfam11553" /db_xref="CDD:151989" gene complement(1647474..1648664) /locus_tag="Acear_1549" /db_xref="GeneID:9513604" CDS complement(1647474..1648664) /locus_tag="Acear_1549" /EC_number="2.6.1.11" /note="COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterProIPR004636:IPR015422:IPR015421:IPR005814:IPR 015424; KEGG: hor:Hore_02850 acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: B8D1G9 Acetylornithine and succinylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases" /codon_start=1 /transl_table=11 /product="acetylornithine aminotransferase apoenzyme" /protein_id="YP_003828120.1" /db_xref="GI:302392300" /db_xref="GeneID:9513604" /translation="MKKEEIVQADKDYFMNVFNDRVPIVVDKGEGVRIYDKDGNEYLD FLAGIAVNALGHSHPKVNEAIKEQVDKVIHCTNIYYIEPQAKLNELLVENSAGDKVFY GNSGAEANEGAIKLARKYFKAQNEDRYEVITTTKSFHGRTLATIAATGQKKYQKPFVP LPEGFKSAPYNDLEALKEAVTDKTAAIMVEPIQGEGGINPATQEYLKGIRELCDEEGI LLILDEIQTGLGRTGKLFAYEHYGIEPDIFSLAKALGNGVPVSAFLAKEEVADAFTPG DHGSTFGGNPLACAAAYATLSTILEEDLVEYAAEMGDYFQAKLQDLVEKYDVVDSIRG KGLMIGLEVEFDANEIVSEAFEQGLLINAVSDTTLRFVPPLIVEESDIDEAVAILEEI IAES" misc_feature complement(1647522..1648664) /locus_tag="Acear_1549" /note="acetylornithine aminotransferase; Provisional; Region: PRK02627" /db_xref="CDD:179453" misc_feature complement(1647522..1648649) /locus_tag="Acear_1549" /note="Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase...; Region: OAT_like; cd00610" /db_xref="CDD:99735" misc_feature complement(order(1647909..1647911,1647987..1647992, 1647996..1647998,1648095..1648097,1648242..1648244, 1648248..1648253,1648344..1648352)) /locus_tag="Acear_1549" /note="inhibitor-cofactor binding pocket; inhibition site" /db_xref="CDD:99735" misc_feature complement(order(1647909..1647911,1647987..1647989, 1647996..1647998,1648095..1648097,1648248..1648253, 1648344..1648349)) /locus_tag="Acear_1549" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature complement(1647909..1647911) /locus_tag="Acear_1549" /note="catalytic residue [active]" /db_xref="CDD:99735" gene complement(1648679..1649542) /locus_tag="Acear_1550" /db_xref="GeneID:9513605" CDS complement(1648679..1649542) /locus_tag="Acear_1550" /EC_number="2.7.2.8" /note="COGs: COG0548 Acetylglutamate kinase; InterPro IPR011148:IPR004662:IPR001048; KEGG: mta:Moth_2288 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Q2RG64 Acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase" /codon_start=1 /transl_table=11 /product="N-acetylglutamate kinase" /protein_id="YP_003828121.1" /db_xref="GI:302392301" /db_xref="GeneID:9513605" /translation="MEDLIKKADILVEALPYMRKFHDKTVVIKYGGSAMVNDEIKKSV LEDITLLKYVGVNPVIVHGGGPVINETLDRFGIESQFHQGLRITTKEIMEVVEMVLVG QVNKEIVSLANQFGSKSIGISGKDGNLIEAEDYELEDDVDLGYVGQVTEINPEVLDNL INSGFLPVVSPIGVGSEGESYNINADLVAGQLAAALDADKLILLTNVEGILEEESDKD SLISSLTIEEAEDMIETGQIAGGMIPKVNSCIDALDGGVRRTHILDGRISHSLLLEIF TDRGIGTMITK" misc_feature complement(1648688..1649515) /locus_tag="Acear_1550" /note="AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using...; Region: AAK_NAGK-C; cd04250" /db_xref="CDD:58616" misc_feature complement(1649486..1649515) /locus_tag="Acear_1550" /note="feedback inhibition sensing region; other site" /db_xref="CDD:58616" misc_feature complement(order(1648712..1648714,1648724..1648729, 1648736..1648738,1649048..1649050,1649075..1649077, 1649159..1649170,1649174..1649176,1649180..1649188, 1649192..1649194,1649213..1649215,1649225..1649227, 1649234..1649236,1649249..1649254,1649261..1649263, 1649318..1649323,1649381..1649383,1649393..1649395, 1649405..1649407,1649486..1649491,1649498..1649500, 1649504..1649512)) /locus_tag="Acear_1550" /note="homohexameric interface [polypeptide binding]; other site" /db_xref="CDD:58616" misc_feature complement(order(1648808..1648810,1648817..1648822, 1648826..1648828,1648832..1648834,1648910..1648912, 1648922..1648930,1648991..1648993,1649444..1649449, 1649456..1649458)) /locus_tag="Acear_1550" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:58616" misc_feature complement(order(1648988..1648993,1648997..1648999, 1649285..1649290,1649351..1649356)) /locus_tag="Acear_1550" /note="N-acetyl-L-glutamate binding site [chemical binding]; other site" /db_xref="CDD:58616" gene complement(1649578..1650804) /locus_tag="Acear_1551" /db_xref="GeneID:9513606" CDS complement(1649578..1650804) /locus_tag="Acear_1551" /EC_number="2.3.1.35" /EC_number="2.3.1.1" /note="COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); InterPro IPR002813:IPR016117; KEGG: hor:Hore_02830 N-acetylglutamate synthase;glutamate N-acetyltransferase; PFAM: arginine biosynthesis protein ArgJ; PRIAM: Amino-acid N-acetyltransferase; SPTR: B8D1G7 N-acetylglutamate synthase;glutamate N-acetyltransferase; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase" /codon_start=1 /transl_table=11 /product="N-acetylglutamate synthase ;glutamate N-acetyltransferase" /protein_id="YP_003828122.1" /db_xref="GI:302392302" /db_xref="GeneID:9513606" /translation="MVTNPVEVEFKDLSGGITNTLGFLGAGINCGIKEYEKDLALIYS ETEANLAAVFTQNQVKAAPVLIGQEIKERGTAQAFIINSGNANACTGEEGFKNANRIN ESLGEELGIDADLIFPASTGIIGQQLPMEAVTSGIEEITDQLHPAGGKKACRAIMTTD TYPKEMAVAFEIDGREVILGGMSKGSGMIEPNMATMLGFLTTDLNISQQLLQEALTEA VDESFNRITVDGDQSTNDAVAIMANGQAGNEQINHKGDNYYKFLAALKEVTKYLAQQI VKDGEGATKFVEIEVVNALTLSDANSIARAIANSQLVKTALFGEDPNWGRIVAAAGYS GGQIELDRLDLEINGQKLLVDGKQELTDPEKLRDLLARDEIKIKLNLHLGSGQAKVWT CDLSYEYVKINGEYHT" misc_feature complement(1649581..1650741) /locus_tag="Acear_1551" /note="Ornithine acetyltransferase (OAT) family; also referred to as ArgJ. OAT catalyzes the first and fifth steps in arginine biosynthesis, coupling acetylation of glutamate with deacetylation of N-acetylornithine, which allows recycling of the acetyl group...; Region: OAT; cd02152" /db_xref="CDD:73147" misc_feature complement(order(1649614..1649622,1649746..1649748, 1649800..1649811,1649818..1649823,1649827..1649838, 1649842..1649844,1649848..1649853,1649857..1649862, 1649869..1649877,1650109..1650120,1650229..1650231, 1650241..1650243,1650430..1650435,1650538..1650540, 1650625..1650639)) /locus_tag="Acear_1551" /note="heterotetramer interface [polypeptide binding]; other site" /db_xref="CDD:73147" misc_feature complement(order(1649581..1649586,1649596..1649598, 1650220..1650222,1650244..1650246,1650253..1650255, 1650328..1650333,1650439..1650444)) /locus_tag="Acear_1551" /note="active site pocket [active]" /db_xref="CDD:73147" misc_feature complement(1650220..1650225) /locus_tag="Acear_1551" /note="cleavage site" /db_xref="CDD:73147" gene complement(1650842..1651882) /locus_tag="Acear_1552" /db_xref="GeneID:9513607" CDS complement(1650842..1651882) /locus_tag="Acear_1552" /EC_number="1.2.1.38" /note="COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; InterPro IPR000706:IPR000534:IPR012280:IPR016040; KEGG: dau:Daud_0339 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SPTR: B1I1C5 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: ATP synthase, F1 delta subunit; N-acetyl-gamma-glutamyl-phosphate reductase, common form" /codon_start=1 /transl_table=11 /product="N-acetyl-gamma-glutamyl-phosphate reductase" /protein_id="YP_003828123.1" /db_xref="GI:302392303" /db_xref="GeneID:9513607" /translation="MIKAGIIGATGYAGAELVRLLTNHSKVEIEFLTSRSFTGQKISE VYPALAGIVDLKCEEIDIKQQAKRVDIVFTALPHGVSMSVVPELIKAGVKVIDLSGDY RYSSQKIYEDWYQQKHESSELIDKAVYGLPELNKEEIKEAGLVANPGCYPTSATLALA PVVEEGLVDSQSIIIDAKSGVTGAGRKPSRVTHFSEVAESFKAYKVGEHRHTSEIEQN LAGLSAKEVILSFTPHLVPMKRGILSTIYADLTQKVNSKELIELYQKFYSQEPFARIR QEEKMPEVKEVTGSNYCDLGIKLDKRTGRLIIISVIDNLIKGASGQAIQNLNLMSDLD EKEGLDFAGIIP" misc_feature complement(1650845..1651837) /locus_tag="Acear_1552" /note="N-acetyl-gamma-glutamyl-phosphate reductase; Validated; Region: argC; PRK00436" /db_xref="CDD:179024" misc_feature complement(1651457..1651837) /locus_tag="Acear_1552" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(1650932..1651408) /locus_tag="Acear_1552" /note="Semialdehyde dehydrogenase, dimerisation domain; Region: Semialdhyde_dhC; pfam02774" /db_xref="CDD:145758" gene complement(1652524..1652724) /locus_tag="Acear_1553" /db_xref="GeneID:9513608" CDS complement(1652524..1652724) /locus_tag="Acear_1553" /note="COGs: COG1278 Cold shock protein; InterProIPR002059:IPR012156:IPR012340:IPR011129:IPR 019844:IPR016027; KEGG: lwe:lwe2036 cold shock-like protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: Q71Y04 Cold-shock domain family protein; PFAM: 'Cold-shock' DNA-binding domain" /codon_start=1 /transl_table=11 /product="cold-shock DNA-binding domain protein" /protein_id="YP_003828124.1" /db_xref="GI:302392304" /db_xref="GeneID:9513608" /translation="MKTGTVKWFDGKKGYGFIEVPGEDDVFVHFSAIEEEGFKTLEEG QEVQFKVVEGDKGPQAEEVTKI" misc_feature complement(1652530..1652721) /locus_tag="Acear_1553" /note="Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein...; Region: CSP_CDS; cd04458" /db_xref="CDD:88424" misc_feature complement(order(1652557..1652559,1652644..1652646, 1652674..1652676,1652701..1652703)) /locus_tag="Acear_1553" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:88424" misc_feature complement(order(1652638..1652649,1652665..1652685)) /locus_tag="Acear_1553" /note="RNA-binding motif; other site" /db_xref="CDD:88424" gene complement(1652827..1653402) /locus_tag="Acear_1554" /db_xref="GeneID:9513609" CDS complement(1652827..1653402) /locus_tag="Acear_1554" /note="COGs: COG0474 Cation transport ATPase; InterPro IPR001757:IPR004014:IPR008250; KEGG: fma:FMG_1563 calcium-transporting P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; SPTR: C6Q4A0 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporter/ATPase, N-terminus; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC" /codon_start=1 /transl_table=11 /product="ATPase P" /protein_id="YP_003828125.1" /db_xref="GI:302392305" /db_xref="GeneID:9513609" /translation="MADKKWYQVEIDKILKEFKTNREKGLTDEIAAELLKEYGKNIVQ QKNQRTLVEMFLDQFKNFLVIILLLAAVVSGIVGEVKDTVVISVIVILNAVLGVFQEH RAEESLQALRRMETPTARVLRSGRWREIDSKELVPGDIVELEAGDAVGADLRIISANN LEVQEAALTGESTSVEKNNGERVVEIFKQII" misc_feature complement(1653217..1653387) /locus_tag="Acear_1554" /note="Cation transporter/ATPase, N-terminus; Region: Cation_ATPase_N; cl02930" /db_xref="CDD:194483" misc_feature complement(<1652854..1653150) /locus_tag="Acear_1554" /note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122" /db_xref="CDD:189402" gene complement(1653430..1654932) /locus_tag="Acear_1555" /db_xref="GeneID:9513610" CDS complement(1653430..1654932) /locus_tag="Acear_1555" /note="COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014021:IPR001650:IPR000330:IPR014001; KEGG: hor:Hore_08850 helicase domain protein; PFAM: helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: B8CWH2 Helicase domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain" /codon_start=1 /transl_table=11 /product="helicase domain protein" /protein_id="YP_003828126.1" /db_xref="GI:302392306" /db_xref="GeneID:9513610" /translation="MAINQRAVDNDLVVLDELADFWAERDFALYPHQIETAQRVIDEL DGRALLADEVGLGKTIEAGLILKEYILRGEVETVLILTPASLSYQWWVELTNKFDIDI FNNRKGKGWHYFDHQIASIDLAKRERHAEVIYQRDFDMVIVDEAHKLKNSDTLNWQFV NNLSPEYMLFLTATPIQNDLDELYNLVSLLKSELFRVNDSDLLKQNLDQVMIRNERTD SELDFTDRDVKLIPLELTSPEQQLYDGITELVKQEYDRCRAENRNLLHLVTLQREICS SSFAVIETLQNFLNSAAEELVPKVEQLLQLAEEIQINQKVQVVEELLKEIDGQAVIFT EYLATQNYICYYLYQRGLMPVKFDGTLNDTQKERAKRFFAEQGDVLVSTAAGRQGINL QFCNVIINYDLPWNPMKLEQRIGRVHRLGQTEEVKIYNLCTKGTIEEKIVNVLHDKIN LFESVVGNLDKIVNNSKEHNLDKSILDVIVNQEGEELEKSLEELLTEQIK" misc_feature complement(1654303..1654854) /locus_tag="Acear_1555" /note="DEAD-like helicases superfamily; Region: DEXDc; smart00487" /db_xref="CDD:128763" misc_feature complement(1654408..1654788) /locus_tag="Acear_1555" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cd00046" /db_xref="CDD:28927" misc_feature complement(1654756..1654770) /locus_tag="Acear_1555" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28927" misc_feature complement(1654492..1654503) /locus_tag="Acear_1555" /note="putative Mg++ binding site [ion binding]; other site" /db_xref="CDD:28927" misc_feature complement(1653646..1653996) /locus_tag="Acear_1555" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature complement(order(1653778..1653786,1653856..1653861, 1653919..1653930)) /locus_tag="Acear_1555" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(order(1653676..1653678,1653685..1653687, 1653697..1653699,1653760..1653762)) /locus_tag="Acear_1555" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" gene complement(1655041..1655439) /locus_tag="Acear_1556" /db_xref="GeneID:9513611" CDS complement(1655041..1655439) /locus_tag="Acear_1556" /note="KEGG: cth:Cthe_0955 hypothetical protein; SPTR: A3DE10 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828127.1" /db_xref="GI:302392307" /db_xref="GeneID:9513611" /translation="MSRYSDSSADKSTLSVKWIFRGIVVSFLLLLAVSIIGGLIITFI DIDDLIIQKILIIFNYLSILTGSFLTGLNVEGNGWLNGGLVGLGHIGLIFLLSLMWVE TLFTLGSLIMLGIGSMTGLIGGMAGINFKD" gene complement(1656207..1656977) /locus_tag="Acear_1557" /db_xref="GeneID:9513612" CDS complement(1656207..1656977) /locus_tag="Acear_1557" /EC_number="3.1.3.6" /EC_number="3.1.3.5" /EC_number="3.6.1.11" /note="COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: pth:PTH_1397 stationary phase survival protein SurE; PFAM: Survival protein SurE; PRIAM: 5'-nucleotidase; SPTR: C0GHU3 Stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE" /codon_start=1 /transl_table=11 /product="5'-nucleotidase ;exopolyphosphatase ;3'-nucleotidase" /protein_id="YP_003828128.1" /db_xref="GI:302392308" /db_xref="GeneID:9513612" /translation="MKILVTNDDGIYADGIQQLARALAKNPDNEVLVVAPDREQSATG HAITLHRPLRVKEVNYDSADAESLAVNGTPADCVKLGIEAILEEKPDIVISGINRGPN LGCDVLYSGTVSAAFEGILLGVPAVAVSLAAYDDLNFTYAAEFISELVEDLAEKGLDK EVLLNVNIPPCNREELEGVQITKLGNRSYINTFDQRTDPRGEDYYWMGGDIVEEGNDE ETDVAAVNQQRISITPIRLNLTDFEAIEELSQKDLDIF" misc_feature complement(1656228..1656977) /locus_tag="Acear_1557" /note="Survival protein SurE; Region: SurE; cl00448" /db_xref="CDD:193823" gene 1657147..1657224 /locus_tag="Acear_R0086" /db_xref="GeneID:9513613" tRNA 1657147..1657224 /locus_tag="Acear_R0086" /product="tRNA-Pro" /db_xref="GeneID:9513613" gene 1657229..1657305 /locus_tag="Acear_R0087" /db_xref="GeneID:9513614" tRNA 1657229..1657305 /locus_tag="Acear_R0087" /product="tRNA-Met" /db_xref="GeneID:9513614" gene complement(1657310..1658059) /locus_tag="Acear_1558" /db_xref="GeneID:9513615" CDS complement(1657310..1658059) /locus_tag="Acear_1558" /note="InterPro IPR003675; KEGG: mta:Moth_1913 abortive infection protein; PFAM: Abortive infection protein; SPTR: Q2RH76 Abortive infection protein; PFAM: CAAX amino terminal protease family" /codon_start=1 /transl_table=11 /product="Abortive infection protein" /protein_id="YP_003828129.1" /db_xref="GI:302392309" /db_xref="GeneID:9513615" /translation="MFKSRYQNQKVVWTGTDILLIILITISMTLLFNFLVASLLEHLS YIIPGVLSYKQIIVNFLQFATMLIVSMYIIFTKYGLSLKILGFQMIDLKKMVTLGIIG GFGICSMAMLVNLGVQKLIMEWWGIVIPSQPIITELMESQNQLTFILYASLIVIVAPI TEEVFFRGLMYQYFKDRFGLFKGGLLAAVIFGALHFSLWSFLATFLGGLGLIILYEVS QSLYTSIIAHATWNFIIVTIIYVLWQVNGVV" misc_feature complement(1657358..1657627) /locus_tag="Acear_1558" /note="CAAX amino terminal protease self- immunity; Region: Abi; cl00558" /db_xref="CDD:193868" gene complement(1658182..1658979) /locus_tag="Acear_1559" /db_xref="GeneID:9513616" CDS complement(1658182..1658979) /locus_tag="Acear_1559" /note="COGs: COG1426 conserved hypothetical protein; KEGG: hor:Hore_08820 helix-turn-helix; SPTR: B8CWG9 Helix-turn-helix" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828130.1" /db_xref="GI:302392310" /db_xref="GeneID:9513616" /translation="MGDMEELGQKIRQARLDRGITIDKVQKSTKIRKKYLKAIEAGDF EVISQEVFLKGFLRVYANYVGLDGQEILNEYNELIDLRQEVKKGKTEIEEDESTAEKV LCFISNHLMKIVAAVVILLMVFLGGTILYKQGIIGNLTQTEQSNMILSEEKKDNTSQE SVSTGIEADTNKQEIKVKDRNTEPSKRNITIKVLETSWIKVVVDGKIVLEEMLSSGTE RSWHADRSVEFLSANAAGVKVVLNGEAFGPFGRQGEVIERKFTLKSE" misc_feature complement(1658242..1658970) /locus_tag="Acear_1559" /note="Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown]; Region: COG1426" /db_xref="CDD:31615" misc_feature complement(1658749..1658958) /locus_tag="Acear_1559" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cl09100" /db_xref="CDD:195788" gene complement(1659015..1659803) /locus_tag="Acear_1560" /db_xref="GeneID:9513617" CDS complement(1659015..1659803) /locus_tag="Acear_1560" /EC_number="3.6.1.27" /note="COGs: COG1968 Uncharacterized bacitracin resistance protein; InterPro IPR003824; KEGG: hor:Hore_08750 undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; PRIAM: undecaprenyl-diphosphatase; SPTR: B8CWG2 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP" /codon_start=1 /transl_table=11 /product="undecaprenol kinase" /protein_id="YP_003828131.1" /db_xref="GI:302392311" /db_xref="GeneID:9513617" /translation="MSILDSIILGIVQGITEFLPISSSGHLVIFKNLLGFTEPHLIYD VFLHFGTLIAVTVFYWDDIRDLLSLDFKYNKERLLIITATFPTAVMGFVLKDTFESLF GSVSAVGIALLVTGGLLWWVENMNIRFDKKVRNLSLLQAIIIGIAQGIAITPGISRSG ITIIAGLFIGLKRKAAARFSFLIFIPAVLGATLLEVIDLFEVGGIEVNYLSLLIGTVT AAVVGYAAIKFLLKALEKDQFEYFAYYVWGIGSLILVFNFISLI" misc_feature complement(1659036..1659803) /locus_tag="Acear_1560" /note="Bacitracin resistance protein BacA; Region: BacA; cl00858" /db_xref="CDD:186224" gene complement(1659973..1660521) /locus_tag="Acear_1561" /db_xref="GeneID:9513618" CDS complement(1659973..1660521) /locus_tag="Acear_1561" /note="COGs: COG3331 Penicillin-binding protein-related factor A recombinase; InterPro IPR004612; KEGG: acl:ACL_0833 Holliday junction-specific endonuclease; PFAM: recombination protein U; SPTR: C5NUC5 recombination protein U; PFAM: recombination protein U; TIGRFAM: recombination protein U" /codon_start=1 /transl_table=11 /product="recombination protein U" /protein_id="YP_003828132.1" /db_xref="GI:302392312" /db_xref="GeneID:9513618" /translation="MTKYRQGYANRGRQLETELETTNQYYNSQGIAKIQKIPIPVKVL NFNPQTGKITKAFYQQKSTVDYIGTYQGRTIVFDAKETNVETRFDLKNIKQHQYQYLK DQNQCGAVAFLLVRFKKLDESYYLPFKLLDEYMIKKQQGGRKSIPYEEIAIDKYKLEA NGLVLLDYLSVVDKVIANREEK" misc_feature complement(1659988..1660500) /locus_tag="Acear_1561" /note="Recombination protein U; Region: RecU; cl01314" /db_xref="CDD:186418" gene complement(1660526..1661353) /locus_tag="Acear_1562" /db_xref="GeneID:9513619" CDS complement(1660526..1661353) /locus_tag="Acear_1562" /note="COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR000943:IPR014284:IPR011991:IPR009042:IPR 007627:IPR007624:IPR007630:IPR013325:IPR013324; KEGG: mta:Moth_0624 RNA polymerase sigma factor RpoD; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: Q2RKT5 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 70 subunit, RpoD subfamily" /protein_id="YP_003828133.1" /db_xref="GI:302392313" /db_xref="GeneID:9513619" /translation="MINSINQYYQDISHDLLTKEEEISLARKAQAGDSEAKDKLIRHN LRLVVSIANKHQGKGLDLQDLVQEGNIGLITAVEKFDPDKGYRFSTYASWWIKQRVTR AIANQGKTIRIPVHVWQKTNKIFKVKDDLQTELGREPTAEEIAEETDISLEKIKEVMR VITDQNLASLNQFVGDDRDTELGQLVPSGSADDPVEGTSQQLLKEDLEELLTELSDRE AEVIRLRFGLRDSRPRTLKEVGEELGVTRERIRQIQLKALNRLKHPTRIKQLKGYLE" misc_feature complement(1661243..1661344) /locus_tag="Acear_1562" /note="Sigma-70 factor, region 1.2; Region: Sigma70_r1_2; pfam00140" /db_xref="CDD:189414" misc_feature complement(1660529..1661248) /locus_tag="Acear_1562" /note="RNA polymerase sigma factor RpoD, C-terminal domain; Region: RpoD_Cterm; TIGR02393" /db_xref="CDD:162836" misc_feature complement(1661024..1661236) /locus_tag="Acear_1562" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature complement(1660760..1660999) /locus_tag="Acear_1562" /note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539" /db_xref="CDD:146934" misc_feature complement(1660568..1660711) /locus_tag="Acear_1562" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cd06171" /db_xref="CDD:100119" misc_feature complement(order(1660580..1660582,1660586..1660591, 1660595..1660603,1660607..1660612,1660616..1660618, 1660646..1660651,1660679..1660681,1660709..1660711)) /locus_tag="Acear_1562" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:100119" gene 1661562..1661777 /locus_tag="Acear_1563" /db_xref="GeneID:9513620" CDS 1661562..1661777 /locus_tag="Acear_1563" /note="COGs: COG2155 conserved hypothetical protein; InterPro IPR007211; KEGG: amt:Amet_2334 hypothetical protein; PFAM: protein of unknown function DUF378; SPTR: A6TQM0 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF378)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828134.1" /db_xref="GI:302392314" /db_xref="GeneID:9513620" /translation="MDTLDRLALILVIIGALNWGLIGLFEFDLVANLFGGQNAALSRL IYSLVGLAGLYSITFLFREETVPTDES" misc_feature 1661562..1661747 /locus_tag="Acear_1563" /note="Domain of unknown function (DUF378); Region: DUF378; cl00943" /db_xref="CDD:120258" gene complement(1661826..1662794) /locus_tag="Acear_1564" /db_xref="GeneID:9513621" CDS complement(1661826..1662794) /locus_tag="Acear_1564" /note="InterPro IPR018392:IPR002482; KEGG: hor:Hore_13890 peptidoglycan-binding LysM; PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; SPTR: B8CXX0 peptidoglycan-binding LysM; PFAM: LysM domain" /codon_start=1 /transl_table=11 /product="peptidoglycan-binding lysin domain protein" /protein_id="YP_003828135.1" /db_xref="GI:302392315" /db_xref="GeneID:9513621" /translation="MNGISLSRVVRSRERLLQQNYRQLDQQVTDSDPEQIIRQLRRIQ NQQLNLLDDLISGLEEPTPPSPSVKLAQHIVQQGETLFLLARKYNTTVARILRVNPDI EDPDVIQTGMVINLPIILPQRPECYFEYTVKPGDTLFRLAQRFDTTVNQLVYYNSISD SDLIYPGRILLIPCPDNQDNQKKSLEEYEGDIEVANESNNENGIYFDTLARDNENNFN GTVKDNLFTADTKFRLERILENFGIQAPERIDFEENIVIGAVGYDIEALDLEDRTLKV VVTDKPKGYHLIKVTKEEFSVEGSHRIDFVTAEDSSLDQKRINISF" misc_feature complement(1662444..1662578) /locus_tag="Acear_1564" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1662534..1662536,1662543..1662545, 1662558..1662560,1662567..1662569,1662576..1662578)) /locus_tag="Acear_1564" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature complement(1662276..1662407) /locus_tag="Acear_1564" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1662363..1662365,1662372..1662374, 1662387..1662389,1662396..1662398,1662405..1662407)) /locus_tag="Acear_1564" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" gene complement(1662863..1665124) /locus_tag="Acear_1565" /db_xref="GeneID:9513622" CDS complement(1662863..1665124) /locus_tag="Acear_1565" /note="COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541:IPR003593; KEGG: hor:Hore_08760 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: B8CWG3 Cell divisionFtsK/SpoIIIE; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family" /codon_start=1 /transl_table=11 /product="DNA translocase FtsK" /protein_id="YP_003828136.1" /db_xref="GI:302392316" /db_xref="GeneID:9513622" /translation="MVNYKLQDYLIPVSNKVVRWFKLKSTLVKIYQERNNELLGIFLI VLAILLGISFYFKATGLVGRILTQGFKVILGNGAYIVPFVFLMWGINLVRDKEFKITG RSIGLCLLFLVILTLFHFESGTKLEFKFALQGRGGGLVGAVILYILRRSLEDLGAYIV LGAVSLIGMLLATDLFLSTLVKQITEYFMELSVKFKNKLNQFKKKLIPEKKATKNSET VQEKESSQVKVNKNSKDNKEKQLPKQEKADRSNTEKQNKLQVGTEQEIKQPELFAEEL EVKDNEYILPPLSLLQKVQVGSSAGVNQADGDLLEKTLDNFGVDAKVGDVSYGPTVTR YEVHPAPGVKVSRISSLSNDIALALAASDVRIEAPIPGKAAVGIEVPNQEQIMVSLRE ILESDAFQNFDSKLGIALGKDITGKSVVADLSGMPHLLVAGATGSGKSVCINSIISSL LYRGSPDELKLMLIDPKKVELNIYDKIPHLIAPVVTDPKKAASALKWVVQEMENRYEL FADSGAKDIASYNRQLSEDEADQKLPYVVVIIDELSDLMMVAADAVEDAICRLAQMAR AAGIHLIIATQRPSVDVITGVIKANIPSRISFAVSSQADSRTILDTGGAEKLLGKGDM LFSPVGSQQGTRIQGAFISEKEVKNLVKYIKRQDNPEYAEKLAEIKDKDITIETDDKD ELYEKAVRIAVTERASISLLQRKLRIGYTRAARLIDTMEEEGIVGEHRGSKAREVLID EEELEELLNEGGK" misc_feature complement(1662920..>1664506) /locus_tag="Acear_1565" /note="DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]; Region: FtsK; COG1674" /db_xref="CDD:31860" misc_feature complement(1663382..1663957) /locus_tag="Acear_1565" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(1662920..1663075) /locus_tag="Acear_1565" /note="Ftsk gamma domain; Region: Ftsk_gamma; cl09645" /db_xref="CDD:158603" gene complement(1665166..1666818) /locus_tag="Acear_1566" /db_xref="GeneID:9513623" CDS complement(1665166..1666818) /locus_tag="Acear_1566" /note="COGs: COG1283 Na+/phosphate symporter; InterPro IPR004633:IPR003841:IPR008170; KEGG: hor:Hore_21650 Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; SPTR: B8D0H5 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter" /codon_start=1 /transl_table=11 /product="Na/Pi-cotransporter II-related protein" /protein_id="YP_003828137.1" /db_xref="GI:302392317" /db_xref="GeneID:9513623" /translation="MSLGMIFNLLGGLGLFIYGMKQMGDGLQKTAGKKLRQLLEMLTT NRIAGVLVGTGVTAIIQSSSATTVMVVGFVNAGLMTLKQSIGVIMGANIGTTITAQLI AFKISHYSFHAIAIGAALYLFGKKRKTKYIGQVLLGFGILFLGLSTMKETMRPLRDSQ MFAVAMERFGSSPILGVILGTVVTVMVQSSSASIGILISLISVNAITYQMAVPILLGD NIGTTITALLSSVGTNSTARRSAMAHMIFNVLGTFTFIAALYLIPDLPAALEKFFIGL SNYFGQEVSAGRLLANTHSAFNILNTLLWLPFVGVIVKVVTSLIPEKDVEFKSGTKYI DERMIETPGVALDQTKKELIRMSKLSQKSVIKAQESFLSEDEDLAAEIKEIEEVINDL ECSIVAYLTDISNKSLSEKDISRLNGYLKLVDAIESVADNAENIAELAEYKIEHKLEF SGQAIEDIEYMFKKVDEAVQISIKALEELDIKKANKLLELEGEIDTLEKDYRNSHLGR LNDGDCLPVSGVVFLDVLKNVEHIGDQVTKIAYSVLEDLKSE" misc_feature complement(1665181..1666758) /locus_tag="Acear_1566" /note="Na+/phosphate symporter [Inorganic ion transport and metabolism]; Region: NptA; COG1283" /db_xref="CDD:31474" misc_feature complement(1666366..1666758) /locus_tag="Acear_1566" /note="Na+/Pi-cotransporter; Region: Na_Pi_cotrans; pfam02690" /db_xref="CDD:190392" misc_feature complement(<1666051..1666323) /locus_tag="Acear_1566" /note="Na+/Pi-cotransporter; Region: Na_Pi_cotrans; pfam02690" /db_xref="CDD:190392" misc_feature complement(1665499..1665762) /locus_tag="Acear_1566" /note="PhoU domain; Region: PhoU; pfam01895" /db_xref="CDD:190154" misc_feature complement(1665190..1665447) /locus_tag="Acear_1566" /note="PhoU domain; Region: PhoU; pfam01895" /db_xref="CDD:190154" gene complement(1666887..1667828) /locus_tag="Acear_1567" /db_xref="GeneID:9513624" CDS complement(1666887..1667828) /locus_tag="Acear_1567" /note="COGs: COG1283 Na+/phosphate symporter; InterPro IPR003841; KEGG: cbt:CLH_0274 Na/Pi-cotransporter family protein/PhoU family protein; PFAM: Na+/Picotransporter; SPTR: B2UYE7 Na/Pi-cotransporter family protein/PhoU family protein; PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter" /codon_start=1 /transl_table=11 /product="Na+/Picotransporter" /protein_id="YP_003828138.1" /db_xref="GI:302392318" /db_xref="GeneID:9513624" /translation="MVLIILFSGLFSFIYGLKLTNISLKDAVDYRIKFLLHKITENRL FSLVVGMLITVLFQSSSATIVLIMSFVNAGLLGVYQALSLVLGANIGTTVTGQLFSFN LENYLWIFFLIGVICYFIYYKSEDDKWLSYTGVFIGFGLIFFGLNLLTAAFAPLKDTE FFLRIIFRLSGNSFLALGSGVAGTAILQSSSAFIGVILALAKQNLIQLSTALRLLLGS NIGTCITAVIAAVNSSATAKKIAIGHIIFNFVGALIFLPMVNFYSSLITLTSSNLARQ IANGHTGFNLINAILFFLLFDRFYWLVESITYAFSRT" misc_feature complement(<1667469..1667792) /locus_tag="Acear_1567" /note="Na+/Pi-cotransporter; Region: Na_Pi_cotrans; pfam02690" /db_xref="CDD:190392" misc_feature complement(<1667058..1667339) /locus_tag="Acear_1567" /note="Na+/Pi-cotransporter; Region: Na_Pi_cotrans; pfam02690" /db_xref="CDD:190392" gene complement(1668663..1668887) /locus_tag="Acear_1568" /db_xref="GeneID:9513625" CDS complement(1668663..1668887) /locus_tag="Acear_1568" /note="KEGG: bbe:BBR47_34140 hypothetical protein; SPTR: C0ZF32 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828139.1" /db_xref="GI:302392319" /db_xref="GeneID:9513625" /translation="MVYYSIIPAGDIFAEEDEEAEEELVELEVDGVTMLINQTEVDKG EIVKVISSNPQDYLNADYQPGTMIKFEPQI" gene complement(1668899..1669747) /locus_tag="Acear_1569" /db_xref="GeneID:9513626" CDS complement(1668899..1669747) /locus_tag="Acear_1569" /note="COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR002142; KEGG: hor:Hore_08720 peptidase S14 ClpP; PFAM: peptidase S49; SPTR: B8CWF9 peptidase S14 ClpP; PFAM: Clp protease" /codon_start=1 /transl_table=11 /product="peptidase S49" /protein_id="YP_003828140.1" /db_xref="GI:302392320" /db_xref="GeneID:9513626" /translation="MSEYNQEQETEEENKISIPRKSKPKRKKKASSQKSAGKLETLKQ LGQTKLPKNIDNDIHCINIVGQIEGHRSLPPKNKTTKYEHLIPQLVAVEQNPKVKGVI ITLNTVGGDIEAGLAISEMLSSLSKPTVSLVLGGGHSIGGPIAVATDKSFIAETATMT IHPIRLTGKVIGVPQTYDYLDKMQDRVINFVSRHSNISNEDFRNLMFRTGELVRDVGT VLIGEEAVDKGMIDEVGGLSQAIKALKEKIDAEEDNKDSKVDIEANNGDVATEAIEVV RQNTLM" misc_feature complement(1669046..1669567) /locus_tag="Acear_1569" /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase...; Region: crotonase-like; cl14780" /db_xref="CDD:189268" misc_feature complement(1669331..1669333) /locus_tag="Acear_1569" /note="active site" /db_xref="CDD:132923" gene 1670065..1670265 /locus_tag="Acear_1570" /db_xref="GeneID:9513627" CDS 1670065..1670265 /locus_tag="Acear_1570" /note="InterPro IPR010035:IPR012675:IPR003749:IPR016155; KEGG: dae:Dtox_1679 thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; SPTR: C1TJF7 Thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS" /codon_start=1 /transl_table=11 /product="thiamine biosynthesis protein ThiS" /protein_id="YP_003828141.1" /db_xref="GI:302392321" /db_xref="GeneID:9513627" /translation="MKIILNGEEKELTSEIPLTDFLTAQNLDPDKLVIQYNQEIIQQE ECSSIILTAGDKLEVLKFVGGG" misc_feature 1670068..1670262 /locus_tag="Acear_1570" /note="ThiaminS ubiquitin-like sulfur carrier protein; Region: ThiS; cd00565" /db_xref="CDD:176353" misc_feature order(1670182..1670184,1670236..1670244) /locus_tag="Acear_1570" /note="thiS-thiF/thiG interaction site; other site" /db_xref="CDD:176353" gene 1670268..1671038 /locus_tag="Acear_1571" /db_xref="GeneID:9513628" CDS 1670268..1671038 /locus_tag="Acear_1571" /note="COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; InterPro IPR013785:IPR008867; KEGG: pth:PTH_0640 hypothetical protein; PFAM: thiazole biosynthesis family protein; SPTR: A1HPQ6 Thiazole biosynthesis family protein; PFAM: Thiazole biosynthesis protein ThiG" /codon_start=1 /transl_table=11 /product="thiazole-phosphate synthase" /protein_id="YP_003828142.1" /db_xref="GI:302392322" /db_xref="GeneID:9513628" /translation="MSDKLIIGEEKLENRLFTGTGKFPNQEIIPDTIKAANSKVVTMA LRRVNFDTPEENVINYIPDNCRLLPNTSGARTAEEAVRIAKIARAAGCGNWIKIEVIS DNKYLLPDNQETIKATEILAKEGFVVLPYVSPDLMVAKKLEEAGAAAVMPLGAPIGSN RGLKTKELVRILIDEIKLPIVVDAGIGKPSQAAEAMEMGADAVLVNTAIATAEDTVAM ARAFDRAVKAGREAYLAGTGKVKNKASASSPLTGFLGE" misc_feature 1670280..1671017 /locus_tag="Acear_1571" /note="Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes...; Region: ThiG; cd04728" /db_xref="CDD:73390" misc_feature order(1670397..1670399,1670433..1670435,1670442..1670444) /locus_tag="Acear_1571" /note="ThiS interaction site; other site" /db_xref="CDD:73390" misc_feature order(1670556..1670558,1670562..1670564,1670814..1670816) /locus_tag="Acear_1571" /note="putative active site [active]" /db_xref="CDD:73390" misc_feature order(1670571..1670573,1670580..1670582,1670589..1670597, 1670664..1670666,1670670..1670678,1670685..1670690, 1670742..1670750,1670757..1670759,1670775..1670777, 1670787..1670789,1670829..1670837,1670847..1670849, 1670856..1670861,1670886..1670888,1670901..1670909, 1670916..1670921,1670928..1670930,1670949..1670951, 1670958..1670963,1670967..1670981,1670985..1670990, 1670994..1670996,1671000..1671008,1671012..1671014) /locus_tag="Acear_1571" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:73390" gene 1671040..1672140 /locus_tag="Acear_1572" /db_xref="GeneID:9513629" CDS 1671040..1672140 /locus_tag="Acear_1572" /note="COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR012726:IPR013785:IPR007197:IPR010722; KEGG: mta:Moth_1664 thiamine biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; radical SAM domain protein; SPTR: Q2RHX3 Thiazole biosynthesis ThiH; TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH" /codon_start=1 /transl_table=11 /product="tyrosine lyase ThiH" /protein_id="YP_003828143.1" /db_xref="GI:302392323" /db_xref="GeneID:9513629" /translation="MSYYDTYSKFKDVNFSDYLKQITAQDVTKVLTKDNLDQQDFLTL LAPAASNFLEELAQKAHELTIQHFGRTISLYAPLYVSDYCVNQCSYCGFNVTNDFQRS KLDLSEVEKEAQAIAKKGFKNLLILTGESRTHAPISYLKEVIKVLKDYFPSLTIEIYP LETEEYKELIAAGIDGLTIYQEVYDEEIYDQVHVKGPKKNYQFRLNAPERGCQAGMRK VNIGALLGLNNWQEETFWTGLHAQYLQNKYLETEINISVPRLRPHIGSYQPNSIVENK DLVQIMLAYRLFLPRIGLNLSTRESAQLRDNLIPLGVTKLSAESSTAVGGYAHDKDEK QFDISDDRTVDEVKKMLIKKGYQPVFKCWHRI" misc_feature 1671040..1672134 /locus_tag="Acear_1572" /note="thiamine biosynthesis protein ThiH; Reviewed; Region: thiH; PRK09240" /db_xref="CDD:181720" misc_feature 1671271..1671867 /locus_tag="Acear_1572" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature order(1671289..1671291,1671295..1671297,1671301..1671303, 1671307..1671315,1671421..1671423,1671427..1671432, 1671514..1671516,1671577..1671579,1671709..1671711, 1671814..1671819) /locus_tag="Acear_1572" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" misc_feature 1671796..1672113 /locus_tag="Acear_1572" /note="Biotin and Thiamin Synthesis associated domain; Region: BATS; cl06149" /db_xref="CDD:157061" gene 1672156..1672791 /locus_tag="Acear_1573" /db_xref="GeneID:9513630" CDS 1672156..1672791 /locus_tag="Acear_1573" /EC_number="2.5.1.3" /note="COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733:IPR013785; KEGG: cth:Cthe_0601 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; PRIAM: Thiamine-phosphate diphosphorylase; SPTR: A3DD07 Thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase" /codon_start=1 /transl_table=11 /product="thiamine-phosphate diphosphorylase" /protein_id="YP_003828144.1" /db_xref="GI:302392324" /db_xref="GeneID:9513630" /translation="MVKNVLDTDLYCLTAEEYSLGRSNIEVVDKMLRADIEIIQYRAK KKKMLYKYKECLKLRKMTKQAGVKFIINDDVDLALAVDADGIHIGQEDLPIEEVRNLV GQDKIIGLSTHSPQQAREAQNRGADYIGVGPIFKTNTKEDVCNPVGLEYLDYVVENID LPFVAIGGIKEHNMDIVKARGAKCISMVTEIVGAENIINKIKNIREKINQK" misc_feature 1672183..1672740 /locus_tag="Acear_1573" /note="Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-...; Region: TMP_TenI; cd00564" /db_xref="CDD:73367" misc_feature order(1672186..1672188,1672192..1672194,1672273..1672275, 1672279..1672281,1672414..1672416,1672486..1672488, 1672537..1672539,1672543..1672545,1672564..1672566, 1672570..1672572,1672645..1672647,1672657..1672659, 1672711..1672722) /locus_tag="Acear_1573" /note="thiamine phosphate binding site [chemical binding]; other site" /db_xref="CDD:73367" misc_feature order(1672273..1672275,1672279..1672281,1672285..1672287, 1672369..1672374,1672429..1672431,1672486..1672488, 1672564..1672566,1672570..1672575,1672657..1672659, 1672717..1672722) /locus_tag="Acear_1573" /note="active site" /db_xref="CDD:73367" misc_feature order(1672279..1672281,1672285..1672287,1672369..1672374, 1672420..1672422,1672429..1672431,1672486..1672488, 1672573..1672575) /locus_tag="Acear_1573" /note="pyrophosphate binding site [ion binding]; other site" /db_xref="CDD:73367" gene complement(1672889..1674559) /locus_tag="Acear_1574" /db_xref="GeneID:9513631" CDS complement(1672889..1674559) /locus_tag="Acear_1574" /note="COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily; InterPro IPR004613:IPR011108:IPR001587; KEGG: hor:Hore_08700 beta-lactamase domain protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: B8CWF7 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="RNA-metabolising metallo-beta-lactamase" /protein_id="YP_003828145.1" /db_xref="GI:302392325" /db_xref="GeneID:9513631" /translation="MSNNQIDKLSCIPLGGVSEIGKNMMVVEIEDEILIIDAGIMFPE DDLLGIDLVIPDMTYLKKNRDRIKGIVLTHGHLDHIGALPYLLKEINVPVYGTKLTLG LVRGNLEEHGLLKDSYLKHVYPGHTAQIGEHFNVEFIRVNHSIADACALAVHTPVGTL VYASDFKFDQTPVNDQMADIHRLAELGQEGVLALFSDSTNAEREGYTMSEKVVGETID EIFSDADGRIIVASFASNIDRIQQFIDSAFNQNRKVAVTGRSMINNVEIASELGYLDI PDGMLVDLDELKDLRDDQIALITTGSQGEPMAALTRMSRGDHRQINIKSGDTVVVSAT AIPGNEKSVGKTINKLFKRGADVIYESVSGVHVSGHASQEELKLMLNLVQPEYFIPVH GEYRHMHCHAKLAREVGIPEENIFINEPGNVMEFSNNDGQTTGSVTAGRVLVDGLGVG DVGNIVLRDRRLLSQDGVLIVVVTIDDRGQIVAGPDIISRGFVYIRESGELISAATRR VEKALSKCEQNNVTEWSILKSEIKDALGSFIYHKIERRPMILPIIMEV" misc_feature complement(1672898..1674559) /locus_tag="Acear_1574" /note="mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]; Region: COG0595" /db_xref="CDD:30940" misc_feature complement(1673921..1674511) /locus_tag="Acear_1574" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" misc_feature complement(1673372..>1673449) /locus_tag="Acear_1574" /note="RNA-metabolising metallo-beta-lactamase; Region: RMMBL; pfam07521" /db_xref="CDD:191768" gene complement(1674803..1675684) /locus_tag="Acear_1575" /db_xref="GeneID:9513632" CDS complement(1674803..1675684) /locus_tag="Acear_1575" /EC_number="4.2.1.52" /note="COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220:IPR005263:IPR013785:IPR020625; KEGG: hor:Hore_08690 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; PRIAM: Dihydrodipicolinate synthase; SPTR: B8CWF6 Dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate synthase" /protein_id="YP_003828146.1" /db_xref="GI:302392326" /db_xref="GeneID:9513632" /translation="MTDLGEVITAMVTPFTDDLEVNYEAAARLANYLADNGSDGILLF GTTGEVPTLNKEEKIKLVEVVKEEVGDKVNIIVGTGSYSTQASIEMTKTATDLGVDGV MLVTPYYNKPPQDGLDKHFKQVAEVTDLPVILYNVPSRTSKNIEAETVARLAEVENIV AVKEASGDLEQVATVNRLTDDDFLIYSGDDGLTLPILSVGGTGVVSVAAHLVGNRIKE MIHCYKSGQVQKAAQLNAELGDVFAKIFITTNPIPVKKAVNLIGYEAGPVRPPLVDAN QQQTEALKSLLQNHNLL" misc_feature complement(1674821..1675666) /locus_tag="Acear_1575" /note="dihydrodipicolinate synthase; Region: dapA; TIGR00674" /db_xref="CDD:129757" misc_feature complement(1674824..1675666) /locus_tag="Acear_1575" /note="Dihydrodipicolinate synthase (DHDPS); Region: DHDPS; cd00950" /db_xref="CDD:188637" misc_feature complement(order(1674872..1674874,1674878..1674880, 1674932..1674937,1675265..1675267,1675271..1675273, 1675358..1675366,1675433..1675435,1675439..1675441, 1675538..1675552)) /locus_tag="Acear_1575" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:188637" misc_feature complement(order(1675115..1675117,1675121..1675123, 1675196..1675198,1675265..1675267,1675280..1675282, 1675544..1675549)) /locus_tag="Acear_1575" /note="active site" /db_xref="CDD:188637" misc_feature complement(1675196..1675198) /locus_tag="Acear_1575" /note="catalytic residue [active]" /db_xref="CDD:188637" gene complement(1675703..1676926) /locus_tag="Acear_1576" /db_xref="GeneID:9513633" CDS complement(1675703..1676926) /locus_tag="Acear_1576" /EC_number="2.7.2.4" /note="COGs: COG0527 Aspartokinase; InterPro IPR001341:IPR001048:IPR018042; KEGG: hor:Hore_08680 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: B8CWF5 Aspartokinase; TIGRFAM: aspartate kinase; PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase" /codon_start=1 /transl_table=11 /product="aspartate kinase" /protein_id="YP_003828147.1" /db_xref="GI:302392327" /db_xref="GeneID:9513633" /translation="MRNVLIQKFGGSSLDTPEKRELVVDKIINSINQGYKPVVVVSAM GREGSPYATDTLINLAKEAYGYINPRDKDLLMSCGEVISTVVVGQKLKSRGYDYQALT GAQAGIVTDDNHGSTKILEVNPGRILEALENNFTPIVAGFQGITEEGEITTLGRGGSD TTACVLGAALHAEMVEIYTDVEGVMTADPDLVPDAKTLKHITYTEVGELAYQGAKVIH PRAAEIAKRERVPVMIKSTFSDAAGTVISDKFKNSDEMDIKGDQLVAGVASRTNVSLV KIIPREEKEFATDLGCFEVLAEAGISVDFINVRPEMVTFIINNELIEKTEEVLAETEY NYEIGNNLIKISVVGAGMTGQPGVMSKVVKALEGDGVSIYQTTDSHTTISCLIREDEE KKALCALHEQFNLAE" misc_feature complement(1675712..1676920) /locus_tag="Acear_1576" /note="aspartate kinase I; Reviewed; Region: PRK08210" /db_xref="CDD:181293" misc_feature complement(1676186..1676917) /locus_tag="Acear_1576" /note="Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that...; Region: AAK; cl00452" /db_xref="CDD:193824" misc_feature complement(order(1676372..1676377,1676384..1676389, 1676891..1676899,1676903..1676905)) /locus_tag="Acear_1576" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:58599" misc_feature complement(order(1676447..1676455,1676795..1676803, 1676894..1676899,1676903..1676905)) /locus_tag="Acear_1576" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:58599" misc_feature complement(1675913..1676092) /locus_tag="Acear_1576" /note="ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme; Region: ACT; cl09141" /db_xref="CDD:195804" misc_feature complement(1675712..1675897) /locus_tag="Acear_1576" /note="ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme; Region: ACT; cl09141" /db_xref="CDD:195804" gene complement(1676950..1677960) /locus_tag="Acear_1577" /db_xref="GeneID:9513634" CDS complement(1676950..1677960) /locus_tag="Acear_1577" /EC_number="1.2.1.11" /note="COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterProIPR012080:IPR005986:IPR000534:IPR012280:IPR 016040; KEGG: hor:Hore_08670 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SPTR: B8CWF4 Aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)" /codon_start=1 /transl_table=11 /product="aspartate semialdehyde dehydrogenase" /protein_id="YP_003828148.1" /db_xref="GI:302392328" /db_xref="GeneID:9513634" /translation="MKRCNVAVVGATGAVGREMLNILEERDFPYDDLKLLATERSAGT IMTVKGEEYEVEVTTPESFEDVDIALFSAGSTASENLAEEVVSRGAVMIDNSSAFRMD DDVPLVVPEVNPEDIAQHEGIIANPNCSTIQMVVPLKPIYDKVGIERIVVSTYQAVSG TGKDAMDELVEQSEKILNEEEIDPEVYPEQIAFNALPHIDVFFDNDYTKEEMKMVNET QKIMNDDSIKVTATTVRIPVLIGHGESVNLELGSKLEAEEAKRLLSETEGVKVIDNPD ELAYPTQIDSEEDDDVLVGRIRVDETLEAGLNLWIVANNLRKGAALNTIQIAEKLIET EF" misc_feature complement(1676965..1677912) /locus_tag="Acear_1577" /note="aspartate-semialdehyde dehydrogenase; Provisional; Region: PRK14874" /db_xref="CDD:184874" misc_feature complement(1677601..1677912) /locus_tag="Acear_1577" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(1677007..1677549) /locus_tag="Acear_1577" /note="Semialdehyde dehydrogenase, dimerisation domain; Region: Semialdhyde_dhC; pfam02774" /db_xref="CDD:145758" gene complement(1678312..1678905) /locus_tag="Acear_1578" /db_xref="GeneID:9513635" CDS complement(1678312..1678905) /locus_tag="Acear_1578" /note="InterPro IPR014214:IPR003382; KEGG: hor:Hore_08660 dihydrodipicolinate synthase subunit B; PFAM: flavoprotein; SPTR: B8CWF3 Dihydrodipicolinate synthase subunit B; TIGRFAM: dipicolinic acid synthetase, B subunit; PFAM: Flavoprotein; TIGRFAM: dipicolinic acid synthetase, B subunit" /codon_start=1 /transl_table=11 /product="dipicolinic acid synthetase, B subunit" /protein_id="YP_003828149.1" /db_xref="GI:302392329" /db_xref="GeneID:9513635" /translation="MELDGKRIGFAVTGSHCTFDQVLPQLKRIVEAGGVVTPILSKSV QNMDTKFGTAEEWKTKITEITDQEPKTTIVEAEPIGPDKLLDILIVAPCTGNTLAKIA NAITDTPVLMAVKSHLRNNRPVVLALASNDGLGNNAHNLGKLLNTKNIYFVPFGQDNP QRKINSLVARMDLIPDTLEYALEERQIQPVLIEYKGI" misc_feature complement(1678318..1678905) /locus_tag="Acear_1578" /note="Flavoprotein; Region: Flavoprotein; cl08021" /db_xref="CDD:195652" gene complement(1678935..1679816) /locus_tag="Acear_1579" /db_xref="GeneID:9513636" CDS complement(1678935..1679816) /locus_tag="Acear_1579" /note="InterPro IPR016040:IPR006151; KEGG: dae:Dtox_3168 dipicolinic acid synthetase, A subunit; PFAM: shikimate/quinate 5-dehydrogenase; SPTR: C1TAI5 Dipicolinic acid synthetase, A subunit; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; TIGRFAM: dipicolinic acid synthetase, A subunit" /codon_start=1 /transl_table=11 /product="shikimate/quinate 5-dehydrogenase" /protein_id="YP_003828150.1" /db_xref="GI:302392330" /db_xref="GeneID:9513636" /translation="MDNKLTGVEIAVLGGGTREEVMLESLIAVDAKVKTLGRPESEIE GLIVEDKVLEVVKDANVVIAPMTGTNEEGYLKATFGDRAVELTQDFFTQLAPESIFMI GIADEEMKDYCQQNNLELIQLAKLDELAILNSIPTAEGAIQVAMEKSDITLHSNKSIV LGLGRVGLTQARMLKGLGSKTYGAARNPADRARAKELGIIPVKFSDLKEVISEMDFIF NTVPAVVLDKEVLSEVKSEVLIIDLASEPGGTDFATAEELGIEAVLSLGLPGRVAPKT AGEILGRITPRLIAERI" misc_feature complement(1678944..1679801) /locus_tag="Acear_1579" /note="dipicolinate synthase subunit A; Reviewed; Region: PRK08306" /db_xref="CDD:181371" misc_feature complement(<1679094..>1679339) /locus_tag="Acear_1579" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene complement(1679888..1680685) /locus_tag="Acear_1580" /db_xref="GeneID:9513637" CDS complement(1679888..1680685) /locus_tag="Acear_1580" /EC_number="1.3.1.26" /note="COGs: COG0289 Dihydrodipicolinate reductase; InterPro IPR011770:IPR016040:IPR000846; KEGG: hor:Hore_08640 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; PRIAM: Dihydrodipicolinate reductase; SPTR: B8CWF1 Dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate reductase" /protein_id="YP_003828151.1" /db_xref="GI:302392331" /db_xref="GeneID:9513637" /translation="MTKEVIVNGALGKMGQEVVKLLNRTDGFKLVSAVDKVDIGEDIH KLLGVSAPVVEIESDLAEAISKTEPDAVVDFTTPQVVMENIETGLENGINMVIGTTGI TEADIDKIEDWTEEAEAKVIIAPNFAVGAILMMKFSQMAAKYLDQAEIIELHHDQKLD APSGTAIKTAELINEVQNATEKEVDEIEKIIGARGGEEGNINIHSVRLSGLVAHQEVL FGGVGQTLKIRHDSINRRSFMPGVKLALESLDEVDGVVYGLEKLMEF" misc_feature complement(1679891..1680685) /locus_tag="Acear_1580" /note="dihydrodipicolinate reductase; Provisional; Region: PRK00048" /db_xref="CDD:178822" misc_feature complement(1680305..1680673) /locus_tag="Acear_1580" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(1679897..1680298) /locus_tag="Acear_1580" /note="Dihydrodipicolinate reductase, C-terminus; Region: DapB_C; pfam05173" /db_xref="CDD:191215" gene complement(1681060..1681560) /locus_tag="Acear_1581" /db_xref="GeneID:9513638" CDS complement(1681060..1681560) /locus_tag="Acear_1581" /note="KEGG: hor:Hore_07990 hypothetical protein; SPTR: C0GIX7 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828152.1" /db_xref="GI:302392332" /db_xref="GeneID:9513638" /translation="MSSVISIFNSQGQAEEALQELKESGYSEADMSLVAKEDEDAGRQ QDVEAGEEMTVGDQNLTDGSTTGGAIGGIAGLLAGAGTLAIPGVGPIIAAGPIAAGLS GAAAGGLTGALVDYGIPQEASQDYEEQIRSGNMLAIYEGIESSEEASEIAAIMQRNGA IDVETH" gene complement(1681623..1681889) /locus_tag="Acear_1582" /db_xref="GeneID:9513639" CDS complement(1681623..1681889) /locus_tag="Acear_1582" /note="InterPro IPR014238:IPR007903:IPR011033; KEGG: pth:PTH_1281 hypothetical protein; PFAM: PRC-barrel domain protein; SPTR: A5D2T2 Uncharacterized conserved protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family" /codon_start=1 /transl_table=11 /product="sporulation protein, YlmC/YmxH family" /protein_id="YP_003828153.1" /db_xref="GI:302392333" /db_xref="GeneID:9513639" /translation="MKLSELQGKEIINMHDGGRLGILGDTELILDIKSGDIESIIIPD QGGFLSIFGEEKYLIIPWQAVKKVGSEVIIVDLDNDLQPQRASI" misc_feature complement(1681659..1681886) /locus_tag="Acear_1582" /note="Photosynthetic reaction center (RC) complex, subunit H; RC is an integral membrane protein-pigment complex which catalyzes light-induced reduction of ubiquinone to ubiquinol, generating a transmembrane electrochemical gradient of protons used to...; Region: PRCH; cl09959" /db_xref="CDD:164180" gene complement(1681952..1682389) /locus_tag="Acear_1583" /db_xref="GeneID:9513640" CDS complement(1681952..1682389) /locus_tag="Acear_1583" /EC_number="3.6.1.23" /note="COGs: COG0756 dUTPase; InterPro IPR008181:IPR008180; KEGG: hor:Hore_07970 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; PRIAM: dUTP diphosphatase; SPTR: B8CW85 Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)" /codon_start=1 /transl_table=11 /product="deoxyuridine 5'-triphosphate nucleotidohydrolase" /protein_id="YP_003828154.1" /db_xref="GI:302392334" /db_xref="GeneID:9513640" /translation="MEIEIKRLDDSLPLPEYKHRGEDAGMDLYSREEGVLKPGKYGLF KTGIAIALPRGYAGFINPRSGLAVDYGVTVLNADGVIDPGYRGEIGVPLINHGAEEFK VKKKTRIAQLVVQKYEEVEWKEVEELSTTDRGEGGFGHTGLRD" misc_feature complement(1682054..1682320) /locus_tag="Acear_1583" /note="Trimeric dUTP diphosphatases; Region: trimeric_dUTPase; cd07557" /db_xref="CDD:143638" misc_feature complement(order(1682057..1682059,1682069..1682071, 1682078..1682092,1682102..1682104,1682108..1682110, 1682114..1682116,1682120..1682122,1682141..1682143, 1682150..1682152,1682168..1682176,1682192..1682209, 1682213..1682215,1682261..1682263,1682267..1682272, 1682285..1682287,1682315..1682320)) /locus_tag="Acear_1583" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:143638" misc_feature complement(order(1682120..1682125,1682135..1682137, 1682144..1682152,1682195..1682203)) /locus_tag="Acear_1583" /note="active site" /db_xref="CDD:143638" gene complement(1682450..1683307) /locus_tag="Acear_1584" /db_xref="GeneID:9513641" CDS complement(1682450..1683307) /locus_tag="Acear_1584" /note="COGs: COG2720 Uncharacterized vancomycin resistance protein; InterPro IPR007391; KEGG: nth:Nther_1452 VanW family protein; PFAM: VanW family protein; SPTR: B2A3A5 VanW family protein; PFAM: VanW like protein" /codon_start=1 /transl_table=11 /product="VanW family protein" /protein_id="YP_003828155.1" /db_xref="GI:302392335" /db_xref="GeneID:9513641" /translation="MVLNVINDFKKKRLLIIISLVIIALLLITNLIVERIKRRLYGVA EGVTYEGESVEYLFWNEVRNLVREDAEKRRVWSRSADIDAKTGRIIAEKEGKIIDIES TVKRIMEAEAGTAVTAKVYQIDSYPTEEDLKKVTEVIGSYKTSISGSRSRLENIKLAA ESINNQLLYSDEVFSFNQVVGPRTEEQGYKEGPVLYNGTAGSGIGGGVCQVSSTLYNA VQEANLQIIERYPHSSPVRYVPEGQDAAVAWNLLDFKFHNQYLFPLIIKGSVHGRTLV IKILGYQQE" misc_feature complement(1682465..1682854) /locus_tag="Acear_1584" /note="VanW like protein; Region: VanW; pfam04294" /db_xref="CDD:146762" gene complement(1683308..1684042) /locus_tag="Acear_1585" /db_xref="GeneID:9513642" CDS complement(1683308..1684042) /locus_tag="Acear_1585" /note="COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509:IPR011330; KEGG: hor:Hore_07960 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: B8CW84 polysaccharide deacetylase; PFAM: Divergent polysaccharide deacetylase; polysaccharide deacetylase; TIGRFAM: probable sporulation protein, polysaccharide deacetylase family" /codon_start=1 /transl_table=11 /product="polysaccharide deacetylase" /protein_id="YP_003828156.1" /db_xref="GI:302392336" /db_xref="GeneID:9513642" /translation="MFNKFRFYFIPLHRIALFAVIILLITASFMVQTLTSDVAPVVND EIKPYYHGPETKEEMAITINVAWGQEHIPKMLEVLEEKDVKVTFFFLGKWVKKFPELT ERIADKGHEVGNHGYQHFHPNQLSRNRLTELIKKNEKLLQEITGEQTELFAPPYGEYN DQVVKVADELGYKTIMWTADTVDWQRPKPEVIIHRVMRKAGKGGIVLMHPTEPTAKAL PKMIDKLRAKGYKLVTVSKLLTESGD" misc_feature complement(1683329..1683940) /locus_tag="Acear_1585" /note="delta-lactam-biosynthetic de-N-acetylase; Region: spore_pdaA; TIGR02884" /db_xref="CDD:131930" misc_feature complement(1683326..1683889) /locus_tag="Acear_1585" /note="Polysaccharide deacetylase; Region: Polysacc_deac_1; cl12061" /db_xref="CDD:189245" gene complement(1684049..1684831) /locus_tag="Acear_1586" /db_xref="GeneID:9513643" CDS complement(1684049..1684831) /locus_tag="Acear_1586" /note="COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509:IPR011330; KEGG: hor:Hore_07950 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: B8CW83 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB" /codon_start=1 /transl_table=11 /product="polysaccharide deacetylase" /protein_id="YP_003828157.1" /db_xref="GI:302392337" /db_xref="GeneID:9513643" /translation="MSFYLSKRIALILLLIIGTSIFFVGNLSPDLSKKVSLLTSNRLV PIYKVDTSQQKIAITLDGMWGAKYTEDILKVLREHDVEITFFFGGNWLEDNPEMAKKI AENGHEIGNHTYSHPHLNSLSKSEIEEELIRNQKLIESLVGRQPKVFRPPFGEYSNKV INVAKELGFQTIQWSIDSLDWKDPGNEAIVNRVLDKVSPGDIILMHNNATDIVEALET LIPKLKKQGYEIVKVSELTYDDNYYIESHSGVQKKRKKSGEE" misc_feature complement(1684121..1684747) /locus_tag="Acear_1586" /note="delta-lactam-biosynthetic de-N-acetylase; Region: spore_pdaA; TIGR02884" /db_xref="CDD:131930" misc_feature complement(1684124..1684687) /locus_tag="Acear_1586" /note="Polysaccharide deacetylase; Region: Polysacc_deac_1; cl12061" /db_xref="CDD:189245" gene 1684990..1686171 /locus_tag="Acear_1587" /db_xref="GeneID:9513644" CDS 1684990..1686171 /locus_tag="Acear_1587" /note="COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508:IPR019606; KEGG: hor:Hore_07940 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; Lipoprotein LpqB, GerMN domain; SMART: cell wall hydrolase/autolysin; SPTR: B8CW82 N-acetylmuramoyl-L-alanine amidase; PFAM: sporulation and spore germination; N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD" /codon_start=1 /transl_table=11 /product="cell wall hydrolase/autolysin" /protein_id="YP_003828158.1" /db_xref="GI:302392338" /db_xref="GeneID:9513644" /translation="MINFWIISKYKFIIILSMIIFLVSFFAGGITKHNNFSQLEKIVV IDPGHGSIDKGTHRNEVYEKEINLKIAKELAALLEKGNLQVILTRTDDSLYKDDRNKD IKYRARLANKKDADLFVSIHVNSFPGTSSFGGQTFYTPNSPQSKKLAKFIQQELINIQ PENYRKIKPGNFYVLNKTDMPAVLAEVGFLSNDVDFKRLTSTEERKKIAKALSKGIIT YFNSNLPLPPTEKEAQQTVQTNTSLNNKFKVYFPKVTATEADLIPINQTVPTTEIFVT NSNSLIEQIASKALEALIAGPELKDKFQNIIPVETEVLELKVKNKTAYVNFSREIMTN FNGGSTKEALAVNAIVQTLTQFSEINEVEILIEGQQNKSIGGHIFFEYPLTKKDLPII R" misc_feature 1685113..1685640 /locus_tag="Acear_1587" /note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino...; Region: MurNAc-LAA; cd02696" /db_xref="CDD:119407" misc_feature order(1685134..1685136,1685176..1685178,1685353..1685355, 1685545..1685547) /locus_tag="Acear_1587" /note="active site" /db_xref="CDD:119407" misc_feature order(1685134..1685136,1685176..1685178,1685353..1685355) /locus_tag="Acear_1587" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:119407" misc_feature 1685728..1686114 /locus_tag="Acear_1587" /note="Sporulation and spore germination; Region: Germane; pfam10646" /db_xref="CDD:151159" gene complement(1686196..1687149) /locus_tag="Acear_1588" /db_xref="GeneID:9513645" CDS complement(1686196..1687149) /locus_tag="Acear_1588" /note="COGs: COG3773 Cell wall hydrolyses involved in spore germination; InterPro IPR018392:IPR011105:IPR002482; KEGG: hor:Hore_07930 cell wall hydrolase SleB; PFAM: cell wall hydrolase SleB; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; SPTR: B8CW81 Cell wall hydrolase SleB; PFAM: LysM domain; Cell Wall Hydrolase" /codon_start=1 /transl_table=11 /product="cell wall hydrolase SleB" /protein_id="YP_003828159.1" /db_xref="GI:302392339" /db_xref="GeneID:9513645" /translation="MRWKKGAFVVCILILMLVIITAGAVAAPRFKLYYEVQEGDALVK VAKKFGTSVDRLKEINNLQKGTIKAGEELKIPQTYQAETDKKRDYQINRILLDEVYKT DRIIDGQFRQKNFVEREIVVKIKDKSTAKVDVSNLRTLDYYLKSGDTLYELAREFNTS VRVLRKLNNLIDTDVIRRGDKIALPINNLTPKQVISKTISREELNLLARLISAEARGE PFVGQVAVGAVVLNRVVSNYFPDSIKRVIYQPGQFAVVSDGQINNQPTRQAYRAAETV LNGQDPSRGALYFYNPKTAKTMQWLSTRSTLVKIGDHVFAR" misc_feature complement(1686922..1687053) /locus_tag="Acear_1588" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1687006..1687008,1687015..1687017, 1687030..1687032,1687039..1687041,1687048..1687050)) /locus_tag="Acear_1588" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature complement(1686577..1687017) /locus_tag="Acear_1588" /note="FOG: LysM repeat [Cell envelope biogenesis, outer membrane]; Region: LytE; COG1388" /db_xref="CDD:31578" misc_feature complement(1686595..1686726) /locus_tag="Acear_1588" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1686682..1686684,1686691..1686693, 1686706..1686708,1686715..1686717,1686724..1686726)) /locus_tag="Acear_1588" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature complement(1686199..1686504) /locus_tag="Acear_1588" /note="Cell Wall Hydrolase; Region: Hydrolase_2; pfam07486" /db_xref="CDD:191754" gene complement(1687234..1689750) /locus_tag="Acear_1589" /db_xref="GeneID:9513646" CDS complement(1687234..1689750) /locus_tag="Acear_1589" /note="COGs: COG1199 Rad3-related DNA helicase; InterProIPR014013:IPR001650:IPR006554:IPR014001:IPR 006555:IPR001405; KEGG: hor:Hore_07920 helicase C2; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicase; SPTR: B8CW80 Helicase c2; PFAM: DEAD_2; DEAD/DEAH box helicase; TIGRFAM: DnaQ family exonuclease/DinG family helicase" /codon_start=1 /transl_table=11 /product="helicase c2" /protein_id="YP_003828160.1" /db_xref="GI:302392340" /db_xref="GeneID:9513646" /translation="MKIDDYFTAEVRTKLKKVIVEADQQEVYCIGRLSSEEEIITEVE VVARGNKQAVPVPAAKLRPGEVVIHNHPSGNLSPSQPDLNLAAKFGAQQIGFIIINNQ VDDLYVVVEPDLAAEMKELAVEEISDLFAAGNALDKTLGQYEYRRQQQIMAEVVAKAF NRSTHLLVEAGTGTGKSLAYLIPSIYWAVKNEQRVVISTNTINLQEQLIKKDIPLLKK ALDLDFKAVLVKGRRNYICLRKLYNLQQIADQALENEERESYLKLLDWATEAQTGCRS ELVFQPQASVWNRVASESDTCLRSDCPHHSQCFFARARAKSINADLLVVNHHLLFSDI AVRKEEGMDLKVAVLPRYSHIICDEAHNIEEVATSYLGEKISKQQLIKYLNNLHVKQS KEGIQGFLMEARFKINQAREQIDEDTRLDLQRLIDNILQPLVLKVTDRTNTFFNVLEK FKQKAQSEKQGENKLRLTEEIREDEGWETIKEEADNLLLSLNQLSKKLDELRVEIDLL STADIDDYEGLLVDITARVDRAKAVVRVIDTVINQTDDDTVDWIEVTKNSREEINCRL NSAPINIAGEFKDNLLLEMDSIIFTSATLTVNKSFDYIRDRLGLEKDLVAELRTGDPF DYSQQALLGIPTDLPEPYDDTFLTEALRVLKELLTANQGRSLVLFTSYGMLNQFYYKL RGELEETKLNLYRQGEKSRHLLVEDFKQDLAPVIFGTASFWEGIDIPGEQLSSVIIVK LPFQVPTDPVIEAKVEEIEAEGRNAFYNYMLPRAVIKFKQGFGRLIRSQSDSGSVIVL DKRILTKNYGKSFISSVPQGCKIIADNHQEITKKVEKIQA" misc_feature complement(<1689496..>1689555) /locus_tag="Acear_1589" /note="Mpr1p, Pad1p N-terminal (MPN) domains; Region: MPN; cl13996" /db_xref="CDD:196778" misc_feature complement(1687237..1689324) /locus_tag="Acear_1589" /note="Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]; Region: DinG; COG1199" /db_xref="CDD:31392" misc_feature complement(1688479..1689318) /locus_tag="Acear_1589" /note="DEAD_2; Region: DEAD_2; cl14887" /db_xref="CDD:196848" misc_feature complement(1687339..1687737) /locus_tag="Acear_1589" /note="CRISPR/Cas system-associated DinG family helicase Csf4; Region: Csf4_U; cl09250" /db_xref="CDD:187934" gene complement(1689785..1690621) /locus_tag="Acear_1590" /db_xref="GeneID:9513647" CDS complement(1689785..1690621) /locus_tag="Acear_1590" /EC_number="3.1.21.2" /note="COGs: COG0648 Endonuclease IV; InterProIPR001719:IPR013022:IPR012307:IPR000463:IPR 018246; KEGG: hor:Hore_07910 apurinic endonuclease Apn1; PFAM: xylose isomerase domain protein TIM barrel; PRIAM: Deoxyribonuclease IV (phage-T(4)-induced); SMART: AP endonuclease family 2; SPTR: B8CW79 Probable endonuclease 4; TIGRFAM: apurinic endonuclease Apn1; PFAM: xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1)" /codon_start=1 /transl_table=11 /product="apurinic endonuclease Apn1" /protein_id="YP_003828161.1" /db_xref="GI:302392341" /db_xref="GeneID:9513647" /translation="MKLGAHLSIAGGVDKAVDRAEELEINAFQIFAKNPRGWTGKELT TEVAELFKEKSKSIELASSVVHANYLSNLATPKDELYKKSKESLTEDIRRADCLGADY VVLHPGNHTGSGIEAGIKRVNQALQEIINEFNPEAKLLLENVAGAGTEVGFNFDDLLA MTEGIPLKRVGICLDTCHAFTAGYDLRSEAGFDGLLTEIDDTFGLENLPVIHVNDSKE EVGSNKDRHYHIGQGKIGSEGFARLVNHSQMKEKVLIIETPIDDNGDDELNLKTLRNL GK" misc_feature complement(1689794..1690621) /locus_tag="Acear_1590" /note="endonuclease IV; Provisional; Region: PRK01060" /db_xref="CDD:179214" misc_feature complement(1689794..1690615) /locus_tag="Acear_1590" /note="AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-...; Region: AP2Ec; cd00019" /db_xref="CDD:28903" misc_feature complement(order(1689818..1689820,1689851..1689853, 1690415..1690417,1690529..1690531,1690604..1690606)) /locus_tag="Acear_1590" /note="AP (apurinic/apyrimidinic) site pocket; other site" /db_xref="CDD:28903" misc_feature complement(order(1690397..1690399,1690406..1690408, 1690412..1690417,1690508..1690522)) /locus_tag="Acear_1590" /note="DNA interaction; other site" /db_xref="CDD:28903" misc_feature complement(order(1689851..1689853,1689941..1689943, 1689947..1689949,1689986..1689988,1690088..1690090, 1690097..1690099,1690196..1690198,1690304..1690306, 1690424..1690426)) /locus_tag="Acear_1590" /note="Metal-binding active site; metal-binding site" /db_xref="CDD:28903" gene complement(1690725..1692851) /locus_tag="Acear_1591" /db_xref="GeneID:9513648" CDS complement(1690725..1692851) /locus_tag="Acear_1591" /EC_number="2.7.7.8" /note="COGs: COG1185 polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); InterProIPR004088:IPR003029:IPR012162:IPR015848:IPR 012340:IPR001247:IPR015847:IPR018111:IPR004087:IPR020568:I PR016027; KEGG: hor:Hore_07900 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; RNA binding S1 domain protein; PRIAM: polyribonucleotide nucleotidyltransferase; SMART: KH domain protein; SPTR: A1HSC0 polyribonucleotide nucleotidyltransferase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase" /codon_start=1 /transl_table=11 /product="polyribonucleotide nucleotidyltransferase" /protein_id="YP_003828162.1" /db_xref="GI:302392342" /db_xref="GeneID:9513648" /translation="MENQEWKMELGGRELTLETGKLAQQANGSVLVRYGETVILVTAT MDDPRGMDYFPLMINYEERLYSVGKIPGGFIKREGRPSEAATLTSRLIDRPLRPLFPE GMRHDVQVIATVLSVDNDNSPEVAAMIGASAALSISDIPFEGPIGGVNVGLVDGELIL NPTVEEQEESSLDLIVAGNKDGVMMVESAANEVTEDKMIEAIDYGHQKLQGIIKLQEE MVAKIGKEEADLELVTVEDPEVEAAVREYAGEDLKEALLTKDKAERGENLDQVKEEVK EHFTDEFADDEGTEEKMKVVSSTLDKITKETIRSLVLDEGKRVDGRDLDEVRPIWCEV DVLPRAHGSGIFTRGQTQVMTVATLGAVGDEQRLDGIEVKESKRYMHHYNFPSFSVGE TGPIRGPGRREIGHGALGERALRPMIPEHDDFPYTIRLVSEVLESNGSTSQASICGST LSLMDAGVPIRKPVAGIAMGLMKKGDKVEVLSDIQGIEDFNGDMDFKVAGSEDGITAL QMDVKIKGISKDILAEALEQARQGRLHILDKMLEVMPESRDELSPYAPSIITMEIDPE KIRDVIGPGGKTIKKIIDETGVNVDIEDDGTVFIAADDQESGKQAQQMVAKMTEDVEV GEIYLGEVKRVTHFGAFVEILPGKEGLVHISELADYHVDEVEDLLTVGDEILVKLTEI DDKDRLNLSRKEALVEREREKDNEDR" misc_feature complement(1690764..1692851) /locus_tag="Acear_1591" /note="polynucleotide phosphorylase/polyadenylase; Provisional; Region: PRK11824" /db_xref="CDD:183327" misc_feature complement(1692429..1692821) /locus_tag="Acear_1591" /note="3' exoribonuclease family, domain 1; Region: RNase_PH; pfam01138" /db_xref="CDD:189854" misc_feature complement(1692228..1692422) /locus_tag="Acear_1591" /note="3' exoribonuclease family, domain 2; Region: RNase_PH_C; pfam03725" /db_xref="CDD:190728" misc_feature complement(1691883..1692137) /locus_tag="Acear_1591" /note="Polyribonucleotide nucleotidyltransferase, RNA binding domain; Region: PNPase; pfam03726" /db_xref="CDD:146390" misc_feature complement(1691475..1691876) /locus_tag="Acear_1591" /note="3' exoribonuclease family, domain 1; Region: RNase_PH; pfam01138" /db_xref="CDD:189854" misc_feature complement(1691007..1691186) /locus_tag="Acear_1591" /note="Polynucleotide phosphorylase (PNPase) K homology RNA-binding domain (KH). PNPase is a polyribonucleotide nucleotidyl transferase that degrades mRNA in prokaryotes and plant chloroplasts. The C-terminal region of PNPase contains domains homologous to...; Region: PNPase_KH; cd02393" /db_xref="CDD:29003" misc_feature complement(order(1691076..1691087,1691100..1691105, 1691112..1691117,1691124..1691138,1691142..1691150, 1691154..1691156)) /locus_tag="Acear_1591" /note="putative nucleic acid binding region [nucleotide binding]; other site" /db_xref="CDD:29003" misc_feature complement(1691124..1691135) /locus_tag="Acear_1591" /note="G-X-X-G motif; other site" /db_xref="CDD:29003" misc_feature complement(1690776..1690979) /locus_tag="Acear_1591" /note="S1_PNPase: Polynucleotide phosphorylase (PNPase), ), S1-like RNA-binding domain. PNPase is a polyribonucleotide nucleotidyl transferase that degrades mRNA. It is a trimeric multidomain protein. The C-terminus contains the S1 domain which binds ssRNA...; Region: S1_PNPase; cd04472" /db_xref="CDD:88437" misc_feature complement(order(1690893..1690895,1690899..1690901, 1690929..1690931,1690953..1690955)) /locus_tag="Acear_1591" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88437" misc_feature complement(1690833..1690838) /locus_tag="Acear_1591" /note="domain interface; other site" /db_xref="CDD:88437" gene complement(1692960..1693226) /locus_tag="Acear_1592" /db_xref="GeneID:9513649" CDS complement(1692960..1693226) /locus_tag="Acear_1592" /note="COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR005290:IPR009068:IPR000589; KEGG: pca:Pcar_1560 30S ribosomal protein S15; PFAM: ribosomal protein S15; SPTR: Q3A4A2 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S15P" /protein_id="YP_003828163.1" /db_xref="GI:302392343" /db_xref="GeneID:9513649" /translation="MLAPEKKEEIIDKYGRHEGDTGSSEVQIAILTARIDELTEHLRD HNQDHNSRRGLLKMVGKRKRLLEYLQNNDVERYRELIKELGIRG" misc_feature complement(1692972..1693211) /locus_tag="Acear_1592" /note="Ribosomal protein S15 (prokaryotic)_S13 (eukaryotic) binds the central domain of 16S rRNA and is required for assembly of the small ribosomal subunit and for intersubunit association, thus representing a key element in the assembly of the whole...; Region: Ribosomal_S15p_S13e; cd00353" /db_xref="CDD:48353" misc_feature complement(order(1693023..1693025,1693035..1693037, 1693074..1693079,1693083..1693088,1693092..1693094, 1693104..1693106,1693113..1693115,1693125..1693127, 1693146..1693148,1693155..1693157,1693206..1693208)) /locus_tag="Acear_1592" /note="16S/18S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:48353" misc_feature complement(order(1692978..1692980,1692990..1692992, 1693110..1693112,1693119..1693121,1693128..1693133, 1693140..1693142)) /locus_tag="Acear_1592" /note="S13e-L30e interaction site [polypeptide binding]; other site" /db_xref="CDD:48353" misc_feature complement(order(1692972..1692977,1693038..1693040, 1693050..1693052)) /locus_tag="Acear_1592" /note="25S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:48353" gene complement(1693353..1694276) /locus_tag="Acear_1593" /db_xref="GeneID:9513650" CDS complement(1693353..1694276) /locus_tag="Acear_1593" /note="COGs: COG0196 FAD synthase; InterPro IPR002606:IPR014729:IPR015865:IPR015864; KEGG: hor:Hore_07880 FMN adenylyltransferase;riboflavin kinase; PFAM: FAD synthetase; Riboflavin kinase; SPTR: B8CW76 FMN adenylyltransferase;riboflavin kinase; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase" /codon_start=1 /transl_table=11 /product="riboflavin biosynthesis protein RibF" /protein_id="YP_003828164.1" /db_xref="GI:302392344" /db_xref="GeneID:9513650" /translation="MEIINGEEIKSETESVVAALGAFDGIHYGHQQLIDEVITTADRL NCKAALFSFKPHPLSVVAPSKAPPLITSWKQKYRILEELGLDKVYLVEFTADFAKLDF KGFVRDYLVAGINVHKVVVGEDFRFGYQGLGDTIKLKKLGAEFGFEVKVIDSVTIDNK VVSSTYIRELIEAGRLQEVKTYLTRNYSIEGKVIDGDKRGRELGFPTANLKPVADYII PKSGVYAVYVYLEGTKMAGAAHVGSCPTFNQDELSIEVNIFDFDDDIYQEKIEVEFVE GLRSEMEFNSRDGLIKQIMKDIAEAKDILEV" misc_feature complement(1693362..1694273) /locus_tag="Acear_1593" /note="bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed; Region: PRK05627" /db_xref="CDD:180171" misc_feature complement(1693689..1694231) /locus_tag="Acear_1593" /note="FAD synthetase, N-terminal domain of the bifunctional enzyme; Region: FAD_synthetase_N; cd02064" /db_xref="CDD:185679" misc_feature complement(order(1693785..1693793,1693815..1693817, 1693905..1693907,1694187..1694189,1694196..1694198, 1694205..1694216)) /locus_tag="Acear_1593" /note="active site" /db_xref="CDD:185679" misc_feature complement(1693359..1693733) /locus_tag="Acear_1593" /note="Riboflavin kinase; Region: Flavokinase; pfam01687" /db_xref="CDD:190069" gene complement(1694326..1695315) /locus_tag="Acear_1594" /db_xref="GeneID:9513651" CDS complement(1694326..1695315) /locus_tag="Acear_1594" /note="COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: hor:Hore_07860 phosphoesterase RecJ domain protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: B8CW74 phosphoesterase RecJ domain protein; PFAM: DHH family; DHHA1 domain" /codon_start=1 /transl_table=11 /product="phosphoesterase RecJ domain protein" /protein_id="YP_003828165.1" /db_xref="GI:302392345" /db_xref="GeneID:9513651" /translation="MRKYQSLLNSLEKYDSFLLTTHVNPDGDAVGSLLGLKYILQSYA DEIDLVVEDSVPEYLSFLSGTEDIYLSDELANTERKTDYDLVFVVDCGDLERIGKVAD LIPEGNKIINIDHHDDNQEYGSYNYVDSTVSSAGELVYDLAVELGANFKKDFGMAIAA AIITDTGNFKFSNTTPKAHRIIADMLELGIDTKRIIKEVYQRESYGGLKLKGKVLSDL KLAGDRNIAWASVSQQDLDLFEVDWEDTEGLVNSIRGVKGVEVGVLFKEVAEEKIRVS FRSNEYFAVNEFAHQFEGGGHPRAAGCTVMAPLAEAEERVISKLESELGVKNQ" misc_feature complement(1694344..1695315) /locus_tag="Acear_1594" /note="Exopolyphosphatase-related proteins [General function prediction only]; Region: COG0618" /db_xref="CDD:30963" misc_feature complement(1694827..1695285) /locus_tag="Acear_1594" /note="DHH family; Region: DHH; pfam01368" /db_xref="CDD:189957" misc_feature complement(1694362..1694529) /locus_tag="Acear_1594" /note="DHHA1 domain; Region: DHHA1; pfam02272" /db_xref="CDD:190268" gene complement(1695322..1695690) /locus_tag="Acear_1595" /db_xref="GeneID:9513652" CDS complement(1695322..1695690) /locus_tag="Acear_1595" /note="COGs: COG0858 Ribosome-binding factor A; InterPro IPR000238:IPR015946:IPR020053; KEGG: hor:Hore_07850 ribosome-binding factor A; PFAM: ribosome-binding factor A; SPTR: B8CW73 Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A" /codon_start=1 /transl_table=11 /product="ribosome-binding factor A" /protein_id="YP_003828166.1" /db_xref="GI:302392346" /db_xref="GeneID:9513652" /translation="MGNYRPRRVAELIKKEVSQMLQQEIKDPRIGFVTITDVEVSEDL RHAKVFVSVLDAEETKEETMEGLENAVGYIRRELGQRIRLRHTPEILFRYDDSIKRGA RIFEILKDLDQDEKEADKKE" misc_feature complement(1695340..1695690) /locus_tag="Acear_1595" /note="Ribosome-binding factor A; Region: RBFA; cl00542" /db_xref="CDD:186071" gene complement(1695710..1697665) /locus_tag="Acear_1596" /db_xref="GeneID:9513653" CDS complement(1695710..1697665) /locus_tag="Acear_1596" /note="COGs: COG0532 translation initiation factor 2 (IF-2; GTPase); InterProIPR000178:IPR005225:IPR006847:IPR000795:IPR 004161:IPR006162:IPR009000; KEGG: hor:Hore_07840 translation initiation factor IF-2; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein; SPTR: B8CW72 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; translation-initiation factor 2; translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2" /codon_start=1 /transl_table=11 /product="bacterial translation initiation factor 2 (bIF-2)" /protein_id="YP_003828167.1" /db_xref="GI:302392347" /db_xref="GeneID:9513653" /translation="MGKIRVYKLAEDLGLESSEVIDILNELGEEVSSHMSTVEDETAD LVAEMVNEEAAEDTKTESGDDVIELETSLTVKELAEEMGEEPNSLMQELVGLGIMATI NQELDEETIETVLAEYGYEVEFKTEEEEEGTSYNELVQDIDDDPEDIEERAPVVTVMG HVDHGKTTLLDAIRETNVTESEAGGITQHIGAYQVDVDGEKITFLDTPGHEAFTSLRA RGAQVTDVAILIIAADDGVMPQTVEAINHAKAADVPIIVAINKVDKHNAQPERVKQEL TEYELVPEEWGGNTICVPISALQKQNIDELLEMVILVSEMEELKANHDRPANGVVVEA ELDKGRGPVATVLIKNGTLKIGDPIVAGLSYGTVKALVNDQGERVKKAGPAMPVGVLG FNSVPQSGDLLQVLEDEREVRKLAERRQDEKRQEDLSQKKTVTLDDLYDQIQEGEIKD LNIIIKGDVQGSVEAIKEALLQLSTDEVQVNVVHSGVGAVREADIMLATASNAIVIGF NVRPDDNARQAAEKEQVDIRTYRVIYKAIEDIRAAMEGMLEPDYKEIVLGRADVRDTF SVPKVGTIAGIYVTDGKVNRNANARLLRDNVVIFEGDIASLKRFEDDVREVDEGYECG LGLENFNDIKVGDTIEIYDYKEIKRTL" misc_feature complement(1697507..1697665) /locus_tag="Acear_1596" /note="Translation initiation factor IF-2, N-terminal region; Region: IF2_N; pfam04760" /db_xref="CDD:147093" misc_feature complement(1695713..1697476) /locus_tag="Acear_1596" /note="translation initiation factor IF-2; Region: IF-2; TIGR00487" /db_xref="CDD:161900" misc_feature complement(1697318..1697449) /locus_tag="Acear_1596" /note="Translation initiation factor IF-2, N-terminal region; Region: IF2_N; pfam04760" /db_xref="CDD:147093" misc_feature complement(1696715..1697206) /locus_tag="Acear_1596" /note="IF2/eIF5B (initiation factors 2/ eukaryotic initiation factor 5B) subfamily. IF2/eIF5B contribute to ribosomal subunit joining and function as GTPases that are maximally activated by the presence of both ribosomal subunits. As seen in other GTPases...; Region: IF2_eIF5B; cd01887" /db_xref="CDD:133287" misc_feature complement(1697165..1697188) /locus_tag="Acear_1596" /note="G1 box; other site" /db_xref="CDD:133287" misc_feature complement(order(1696844..1696846,1696856..1696858, 1696961..1696966,1697033..1697038,1697090..1697095, 1697141..1697146,1697153..1697155,1697162..1697167, 1697177..1697179,1697183..1697185)) /locus_tag="Acear_1596" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:133287" misc_feature complement(order(1696772..1696780,1696874..1696879, 1696883..1696888,1697033..1697035,1697162..1697182)) /locus_tag="Acear_1596" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133287" misc_feature complement(1697093..1697113) /locus_tag="Acear_1596" /note="Switch I region; other site" /db_xref="CDD:133287" misc_feature complement(1697105..1697107) /locus_tag="Acear_1596" /note="G2 box; other site" /db_xref="CDD:133287" misc_feature complement(1697039..1697050) /locus_tag="Acear_1596" /note="G3 box; other site" /db_xref="CDD:133287" misc_feature complement(1696988..1697044) /locus_tag="Acear_1596" /note="Switch II region; other site" /db_xref="CDD:133287" misc_feature complement(1696877..1696888) /locus_tag="Acear_1596" /note="G4 box; other site" /db_xref="CDD:133287" misc_feature complement(1696772..1696780) /locus_tag="Acear_1596" /note="G5 box; other site" /db_xref="CDD:133287" misc_feature complement(1696403..1696687) /locus_tag="Acear_1596" /note="This family represents the domain II of bacterial Initiation Factor 2 (IF2) and its eukaryotic mitochondrial homologue mtIF2. IF2, the largest initiation factor is an essential GTP binding protein. In E. coli three natural forms of IF2 exist in the...; Region: IF2_mtIF2_II; cd03702" /db_xref="CDD:58093" misc_feature complement(1696040..1696366) /locus_tag="Acear_1596" /note="Translation-initiation factor 2; Region: IF-2; pfam11987" /db_xref="CDD:152422" misc_feature complement(1695743..1695994) /locus_tag="Acear_1596" /note="mtIF2_IVc: this family represents the C2 subdomain of domain IV of mitochondrial translation initiation factor 2 (mtIF2) which adopts a beta-barrel fold displaying a high degree of structural similarity with domain II of the translation elongation...; Region: mtIF2_IVc; cd03692" /db_xref="CDD:58083" gene complement(1697738..1698868) /locus_tag="Acear_1597" /db_xref="GeneID:9513654" CDS complement(1697738..1698868) /locus_tag="Acear_1597" /note="COGs: COG0195 transcription elongation factor; InterProIPR004088:IPR010213:IPR013735:IPR012340:IPR 015946:IPR004087:IPR009019:IPR016027; KEGG: hor:Hore_07820 NusA antitermination factor; PFAM: NusA domain protein; SPTR: B8CW70 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA" /codon_start=1 /transl_table=11 /product="NusA antitermination factor" /protein_id="YP_003828168.1" /db_xref="GI:302392348" /db_xref="GeneID:9513654" /translation="MNIELIQALEDIEKDKNIPKEMLLDALKAALESAYKKNFGSKQN VEIEIDEENGEVNVYSNREVVKEVDNPNLEMSLEEAREIDPNYEAGDVVSVEVTPANF GRIAAQTAKQVVIQRIREAERDIIYEEFADMEDEIITGIIQRNHKKNVIVDLGRTEAI LIPPEQIPNENYEPSERIKIYIVEVKQTTKGPNILVSRTHPGLLKRLFELEVPEIHDG VVKIKAVAREAGFRSKIAVDSTEAEVDPIGSCVGPNGMRVQAVVDELNGEKIDIVNWS EDPAEFIANALSPAEVTGVEVDEEEQVAVVVVPDYQLSLAIGKEGQNARLAAKLTGWK IDIKSESEVDEEILESMDDVETDGEEGSNFDFTEVDLSDGLS" misc_feature complement(1697786..1698868) /locus_tag="Acear_1597" /note="transcription elongation factor NusA; Provisional; Region: nusA; PRK12327" /db_xref="CDD:183442" misc_feature complement(1698494..1698859) /locus_tag="Acear_1597" /note="NusA N-terminal domain; Region: NusA_N; pfam08529" /db_xref="CDD:192057" misc_feature complement(1698275..1698475) /locus_tag="Acear_1597" /note="S1_NusA: N-utilizing substance A protein (NusA), S1-like RNA-binding domain. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. NusA is a transcription elongation factor containing an N-terminal catalytic domain and...; Region: S1_NusA; cd04455" /db_xref="CDD:88421" misc_feature complement(order(1698383..1698385,1698389..1698391, 1698416..1698418,1698440..1698442)) /locus_tag="Acear_1597" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88421" misc_feature complement(order(1698290..1698292,1698389..1698391, 1698395..1698397,1698422..1698424,1698434..1698436)) /locus_tag="Acear_1597" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:88421" misc_feature complement(1697855..1698034) /locus_tag="Acear_1597" /note="NusA_K homology RNA-binding domain (KH). NusA is an essential multifunctional transcription elongation factor that is universally conserved among prokaryotes and archaea. NusA anti-termination function plays an important role in the expression of...; Region: NusA_KH; cd02134" /db_xref="CDD:48406" misc_feature complement(1697906..1697917) /locus_tag="Acear_1597" /note="G-X-X-G motif; other site" /db_xref="CDD:48406" gene complement(1698891..1699352) /locus_tag="Acear_1598" /db_xref="GeneID:9513655" CDS complement(1698891..1699352) /locus_tag="Acear_1598" /note="COGs: COG0779 conserved hypothetical protein; InterPro IPR003728; KEGG: cth:Cthe_0995 hypothetical protein; PFAM: protein of unknown function DUF150; SPTR: C7HBX1 Putative uncharacterized protein; PFAM: Uncharacterised BCR, YhbC family COG0779" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828169.1" /db_xref="GI:302392349" /db_xref="GeneID:9513655" /translation="MGQKIADYIFDLARPIVEDHGLELVDTEYQKEGQDWTVRVFVDK PEGVTLDDCQKISREISDRLDIEDPIEKSYILEVSSPGLDRPLKDEEDFKRFTGHLID VSTYAPVNGEKSFTGELLEIIDDKVKLKLDNDDVVEISRDKIAKANLALEF" misc_feature complement(1698894..1699352) /locus_tag="Acear_1598" /note="ribosome maturation protein RimP; Reviewed; Region: PRK00092" /db_xref="CDD:178857" misc_feature complement(<1699002..1699319) /locus_tag="Acear_1598" /note="The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members...; Region: Sm_like; cl00259" /db_xref="CDD:193733" misc_feature complement(1698894..1699133) /locus_tag="Acear_1598" /note="The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members...; Region: Sm_like; cl00259" /db_xref="CDD:193733" misc_feature complement(order(1698972..1699001,1699002..1699016, 1699032..1699052)) /locus_tag="Acear_1598" /note="Sm1 motif; other site" /db_xref="CDD:99752" misc_feature complement(order(1698909..1698926,1698930..1698935, 1698939..1698947,1698978..1698980,1698999..1699001, 1699008..1699010,1699014..1699016,1699032..1699037, 1699041..1699043)) /locus_tag="Acear_1598" /note="D3 - B interaction site; other site" /db_xref="CDD:99752" misc_feature complement(order(1698909..1698923,1698930..1698932, 1699011..1699013,1699035..1699037,1699041..1699043)) /locus_tag="Acear_1598" /note="D1 - D2 interaction site; other site" /db_xref="CDD:99752" misc_feature complement(order(1698909..1698923,1698927..1698944, 1698993..1698995,1699032..1699040)) /locus_tag="Acear_1598" /note="Hfq - Hfq interaction site; other site" /db_xref="CDD:99752" misc_feature complement(order(1698933..1698935,1698987..1698989, 1698993..1698995)) /locus_tag="Acear_1598" /note="RNA binding pocket [nucleotide binding]; other site" /db_xref="CDD:99752" misc_feature complement(1698912..1698947) /locus_tag="Acear_1598" /note="Sm2 motif; other site" /db_xref="CDD:99752" gene complement(1699552..1703874) /locus_tag="Acear_1599" /db_xref="GeneID:9513656" CDS complement(1699552..1703874) /locus_tag="Acear_1599" /EC_number="2.7.7.7" /note="COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterProIPR006308:IPR006054:IPR004365:IPR004013:IPR 013520:IPR011708:IPR003141:IPR006055:IPR012337:IPR016195:I PR016027; KEGG: hor:Hore_07800 DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; phosphoesterase PHP domain protein; SPTR: B8CW68 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III, epsilon subunit; PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; Exonuclease; OB-fold nucleic acid binding domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, alpha chain, Gram-positive type" /codon_start=1 /transl_table=11 /product="DNA polymerase III catalytic subunit, PolC type" /protein_id="YP_003828170.1" /db_xref="GI:302392350" /db_xref="GeneID:9513656" /translation="MLRVYIEAAKENIIQQELATELLTASDVDLSAQIKFKKIVLEPE TKRLEIYGQAAKFLKEEGLTGTIAEIIERKIDPIQQVNCYFNYFRADLSLEERLENKW SGIVTTVADEFPMTKGWLLEAKWELVDKQQLIVQVKNKMGIEKLQAKKCDVLISDLIA DRLNQEVTVEFELGDFSKEVKALSKQQQQENEDYVNNLMAAVDSQMENQTGSSDGNNS NNRSESKIIMGKKIKSEVTDIEDLQSEERSVTIQGEVINLEIRELKSGRNLVIFAITD TTDSITAKVFEDKDGKVASNISEGDWLRVRGRAQIDKYTQELTVMPRDVSRFQPEIKE DQAEEKRVELHLHTQMSAMDSVVELEDVIERAADWEHQALAITDHGVVQSFPEAYNIA DDLDLKLVYGLEAYLVDDGEPIVINEADVELEETEYIVFDLETTGFNPYHNEIIEIGA AKVKDGRIIDRFGTLVDPETEIPERIVELTGIDNSMVAGKPKKEEALNEFLDFVGEAT IVAHNLSFDRNFINNKLQAIGESALDNSALDTLNLARALLDLKSFKLNRLAKEFDKSL DNHHRAVDDAEVTAEILLELLDILKEDGVTHLTEVNELSSEIDYKRLRPYHAVILVKN QQGLKNLYKLVSKAHIETFHRVPRILKSDLLKRREGLIIGSACEAGQLYQAIVNGKDE STIREIAEFYDYLEIQPLGNNQFLIENEQVDSKEKLKEINHQIYQLGQKLNKPVVATG DVHFLDPEDKIYREILMEGQGFDDAEDQAPLYYRTTEEMLDEFDYFEPEVAKEVVIDN PKQIVEEVEEVKPVPDGLFTPEIEGAVEEVKQMTYNKARSIYGDELPELVVNRLEKEL DAIIGNGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSLVATMCDITEVNPLPPHYVC PKCKYSEFFTDGSVGIGVDLPDEVCPECGADLIKSGSDIPFEVFMGFEGDKVPDIDLN FSGEYQPEVHRYTEDLFGEDHVYRAGTISTIADRTAYGFVKGYMDDRSLTLRKAEVNR LVDGCTGARKTTGQHPGGQMVVPQDKEVFDFTPIQRPANDQDSDVLTTHFDYHSISGR ILKLDILGHDDPTTIRMLQDLTGVDPTSIPLDNPETMAIFSKVEPLGVSKEEIGTTVG SLGIPEFGTSFVRQMLEDTRPTTFAELVRISGLSHGTDVWLNNAQDLIEEGTAELSEV ISVRDDIMNYLLQKGVEASKAFWIMEDVRHGEGLTEEQEQTMRDNDVPDWYIKSCKKI KYMFPKAHAVAYVMMAFRIAFFKVHYPEAFYNTYFTIKSADFDAQIVLQGKDFIKEKI QEIKAKGNDATQKDKNTLTVLEIVIEALVRGIEFVSVDLYDSEAEKFQITNNGLRPPL ITLQGLGKSAAESIIQAREEGEFSSIEDLKNRTSISKTVIEVMKEHGCLDGLPETNQL SFFQ" misc_feature complement(1699558..1703778) /locus_tag="Acear_1599" /note="DNA polymerase III PolC; Validated; Region: polC; PRK00448" /db_xref="CDD:179031" misc_feature complement(1703260..1703766) /locus_tag="Acear_1599" /note="DNA polymerase III polC-type N-terminus; Region: DNA_pol3_alph_N; pfam11490" /db_xref="CDD:151927" misc_feature complement(1702894..1703130) /locus_tag="Acear_1599" /note="polC_OBF: A subfamily of OB folds corresponding to the N-terminal OB-fold nucleic acid binding domain of Bacillus subtilis type C replicative DNA polymerase III alpha subunit (polC). Replication in B. subtilis and Staphylococcus aureus requires two...; Region: polC_OBF; cd04484" /db_xref="CDD:72956" misc_feature complement(order(1702897..1702899,1702957..1702959, 1702963..1702965,1702969..1702971,1703125..1703127)) /locus_tag="Acear_1599" /note="generic binding surface II; other site" /db_xref="CDD:72956" misc_feature complement(order(1702918..1702926,1702945..1702953, 1702972..1702974,1703017..1703019,1703023..1703031, 1703047..1703049,1703053..1703064,1703104..1703112)) /locus_tag="Acear_1599" /note="generic binding surface I; other site" /db_xref="CDD:72956" misc_feature complement(1702648..1702848) /locus_tag="Acear_1599" /note="DNA polymerase alpha chain like domain; Region: POLIIIAc; smart00481" /db_xref="CDD:128757" misc_feature complement(1702135..1702590) /locus_tag="Acear_1599" /note="DEDDh 3'-5' exonuclease domain family; Region: DEDDh; cd06127" /db_xref="CDD:176648" misc_feature complement(order(1702150..1702152,1702165..1702167, 1702324..1702332,1702336..1702341,1702564..1702566, 1702570..1702581)) /locus_tag="Acear_1599" /note="active site" /db_xref="CDD:176648" misc_feature complement(order(1702150..1702152,1702165..1702167, 1702327..1702332,1702336..1702341,1702564..1702566, 1702570..1702581)) /locus_tag="Acear_1599" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:176648" misc_feature complement(order(1702150..1702152,1702165..1702167, 1702324..1702326,1702573..1702575,1702579..1702581)) /locus_tag="Acear_1599" /note="catalytic site [active]" /db_xref="CDD:176648" misc_feature complement(1700125..1701399) /locus_tag="Acear_1599" /note="Bacterial DNA polymerase III alpha subunit; Region: DNA_pol3_alpha; pfam07733" /db_xref="CDD:191832" gene complement(1703887..1704567) /locus_tag="Acear_1600" /db_xref="GeneID:9513657" CDS complement(1703887..1704567) /locus_tag="Acear_1600" /note="COGs: COG1285 membrane protein; InterPro IPR003416:IPR002912; KEGG: cth:Cthe_1919 MgtC/SapB transporter; PFAM: MgtC/SapB transporter; amino acid-binding ACT domain protein; SPTR: A3DGQ9 MgtC/SapB transporter; PFAM: MgtC family" /codon_start=1 /transl_table=11 /product="MgtC/SapB transporter" /protein_id="YP_003828171.1" /db_xref="GI:302392351" /db_xref="GeneID:9513657" /translation="MILNYVEILSRLVLAILLGGMVGWERESSSRPAGFRTNILVCLG SALIMVVSLKFYGLFEAAHSNDPGRIAAQVVSGIGFLGAGTIIREGFAVKGLTTAAGL WAIAGVGLAVGAGFYFSAISATVLIIMTLTILSIIEKKITHGNREKKLRIKAYDQPGE IGKIGSVLGDHNVHILDLSIDHIRNEQNIYINLRVRLPADFDANQVIPHLTQTTGVIQ VELKDDSG" misc_feature complement(1703899..1704561) /locus_tag="Acear_1600" /note="Uncharacterized membrane protein [Function unknown]; Region: SapB; COG1285" /db_xref="CDD:31476" misc_feature complement(<1704274..1704534) /locus_tag="Acear_1600" /note="MgtC family; Region: MgtC; cl12207" /db_xref="CDD:187193" misc_feature complement(1703959..1704120) /locus_tag="Acear_1600" /note="ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme; Region: ACT; cd02116" /db_xref="CDD:153139" gene complement(1704637..1705266) /locus_tag="Acear_1601" /db_xref="GeneID:9513658" CDS complement(1704637..1705266) /locus_tag="Acear_1601" /note="COGs: COG0463 glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: nth:Nther_1438 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: B2A391 glycosyl transferase family 2; PFAM: glycosyl transferase family 2" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_003828172.1" /db_xref="GI:302392352" /db_xref="GeneID:9513658" /translation="MEIAAVIPAYNEEERIAEVAKVAIQHNLITETIVVSDGSTDNTA LIANRCGAEVLELSENIGKGGAMQLGIEETEAEIILFLDADLIGLKEKHLDKLLKPLI NNKVKMTVGVFGEGRFTTDLAHKIAPFLSGQRGIRREILQQISNLDLTKFGVEVALTR YANEAGIKTKQVRLEDLTHVMKEEKLGFWQGLIARLKMYWEMLKGVRWS" misc_feature complement(1704790..1705251) /locus_tag="Acear_1601" /note="DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; Region: DPM_DPG-synthase_like; cd04179" /db_xref="CDD:133022" misc_feature complement(order(1705012..1705014,1705237..1705239, 1705243..1705245)) /locus_tag="Acear_1601" /note="Ligand binding site [chemical binding]; other site" /db_xref="CDD:133022" misc_feature complement(order(1705012..1705017,1705156..1705158)) /locus_tag="Acear_1601" /note="Putative Catalytic site [active]" /db_xref="CDD:133022" misc_feature complement(1705012..1705020) /locus_tag="Acear_1601" /note="DXD motif; other site" /db_xref="CDD:133022" gene complement(1705282..1706334) /locus_tag="Acear_1602" /db_xref="GeneID:9513659" CDS complement(1705282..1706334) /locus_tag="Acear_1602" /EC_number="1.17.7.1" /note="COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; InterPro IPR016425:IPR004588:IPR011005; KEGG: hor:Hore_07760 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; PRIAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; SPTR: B8CW64 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase" /codon_start=1 /transl_table=11 /product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase" /protein_id="YP_003828173.1" /db_xref="GI:302392353" /db_xref="GeneID:9513659" /translation="MLRKEIKQVEIGDVKIGGDAPISVQSMTNTDTRDVAATVEQIRK LEKAGCELIRVAVPDQDAAEKVDEIKAAIDIPLIADIHFNHRLALRVLELGIDGLRIN PGNIGGEDKIKAVALAAKKREVPIRVGVNAGSLEEGLLAEYGSPTSEAMVESALQNIR LLEKYGFNDIIISLKASDVDMTKEAYELIAKKVNYPLHLGITEAGTEWAGTIKSAVGL GIILNKGLGDTIRVSLTGDPVQEVRVGYEILKSLNLRQKGPEIISCPTCGRCEIDLIE VANEVEQKIQNLDLNLKVAIMGCVVNGPGEAKEADIGIAGGKNVGLLFKEGEVIRKVS EDELIATLLTEIDKMK" misc_feature complement(1705288..1706334) /locus_tag="Acear_1602" /note="4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed; Region: ispG; PRK00366" /db_xref="CDD:178989" misc_feature complement(1705294..1706328) /locus_tag="Acear_1602" /note="1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Region: ispG_gcpE; TIGR00612" /db_xref="CDD:188068" gene complement(1706315..1706902) /locus_tag="Acear_1603" /db_xref="GeneID:9513660" CDS complement(1706315..1706902) /locus_tag="Acear_1603" /note="InterPro IPR006675:IPR006674:IPR003607; KEGG: hor:Hore_07750 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: B8CW63 Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG" /codon_start=1 /transl_table=11 /product="metal dependent phosphohydrolase" /protein_id="YP_003828174.1" /db_xref="GI:302392354" /db_xref="GeneID:9513660" /translation="MLTEHVTLETLITDSVAKKHLPQGGLRHAVITAENAFELANERQ LCVDIATKAGLLHDIGHTTWEHQGEWDYESYNYYDIHTIKGAERAHELLIFKGEDLSK ARTVALAILFHSDSSPISENVELTPLQQLVFDADDMDELKDKERHNLEIDFAEALERV RRLDMLVYQSLQNCSALQCKDCNGRVGETDAEKRD" misc_feature complement(1706462..1706827) /locus_tag="Acear_1603" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" gene complement(1706921..1707994) /locus_tag="Acear_1604" /db_xref="GeneID:9513661" CDS complement(1706921..1707994) /locus_tag="Acear_1604" /note="COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478:IPR004387:IPR008915; KEGG: hor:Hore_07740 membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: B8CW62 Putative membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP" /codon_start=1 /transl_table=11 /product="membrane-associated zinc metalloprotease" /protein_id="YP_003828175.1" /db_xref="GI:302392355" /db_xref="GeneID:9513661" /translation="MLTTVVSFVVVISILIFVHEFGHFIVAKKTGVLVEEFAIGMGPK LVGKQKGETLYSIRLFPLGGYCKMTGEFPIDEEEDEIEDVKQYRQAYRNERCLFQKSV FERMAVIFTGPLMNFLLAVVVFSLIFSVFGVPVSGSSSTVIGTVLPDKPAKEAGLQAQ DKIVAVNDQQVNNWEELAALINKNPNQEIKVTVKRNGDFKSFQVTPELDSERDIGLIG IMPQLVREQAGIFKSIKLGVQQTLAVTVGIISGVWQMITGQMSSSVAGPVKIAQLVGD AAQVSILKVLNLMAILSVNLGILNLLPFPALDGGRLVFLGIEVVRGKAVDPEKEGFVH FIGLVLLLILMAIIVYRDIVDIF" misc_feature complement(1706924..1707940) /locus_tag="Acear_1604" /note="Predicted membrane-associated Zn-dependent proteases 1 [Cell envelope biogenesis, outer membrane]; Region: COG0750" /db_xref="CDD:31093" misc_feature complement(<1707617..1707940) /locus_tag="Acear_1604" /note="RseP-like Site-2 proteases (S2P), zinc metalloproteases (MEROPS family M50A), cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. In Escherichia coli, the S2P homolog...; Region: S2P-M50_PDZ_RseP-like; cd06163" /db_xref="CDD:100084" misc_feature complement(order(1707926..1707928,1707935..1707940)) /locus_tag="Acear_1604" /note="active site" /db_xref="CDD:100084" misc_feature complement(1707377..>1707553) /locus_tag="Acear_1604" /note="PDZ domain of bacterial and plant zinc metalloprotases, presumably membrane-associated or integral membrane proteases, which may be involved in signalling and regulatory mechanisms. May be responsible for substrate recognition and/or binding, as most...; Region: PDZ_metalloprotease; cd00989" /db_xref="CDD:29046" misc_feature complement(1706933..>1707142) /locus_tag="Acear_1604" /note="Site-2 protease (S2P) class of zinc metalloproteases (MEROPS family M50) cleaves transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of this family use proteolytic...; Region: S2P-M50; cl10020" /db_xref="CDD:127338" misc_feature complement(1707086..1707097) /locus_tag="Acear_1604" /note="putative substrate binding region [chemical binding]; other site" /db_xref="CDD:100078" gene complement(1707988..1709145) /locus_tag="Acear_1605" /db_xref="GeneID:9513662" CDS complement(1707988..1709145) /locus_tag="Acear_1605" /EC_number="1.1.1.267" /note="COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR003821:IPR013512:IPR013644:IPR016040; KEGG: cth:Cthe_0999 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: B6FZH9 Putative uncharacterized protein; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose 5-phosphate reductoisomerase" /protein_id="YP_003828176.1" /db_xref="GI:302392356" /db_xref="GeneID:9513662" /translation="MKTVTILGSTGSIGKQTLEVIRKLDLEYELTALTANSNVEVLAA QVREFKPKFAVLMNEEAASELKYKLSDLETKVLTGKEGLIRAATVDQVDLVINSVVGA AGLMPTLEAIEAGKDIGLANKETLVVAGELVMAKAKENGVQILPIDSEHNAVFQALAG EDREVIEKIILTASGGPFRGSTKQELADVTVEEALDHPNWDMGGKITIDSATLMNKGL EVIEARWLFDVEFTDIEVVVHPQSIIHSLVQFKDTSIIAELGLPDMKVPIQYVLTYPQ RQENNLERLNLAEVGRLDFEEPDRELFPCLDYAYQAGELGGTMPAVLNAANEVAVARF LAGKLKFIEIPKVIKRVMEQHQIVESPNLTEILAADSWARTQGEKEVEAFC" misc_feature complement(1708024..1709145) /locus_tag="Acear_1605" /note="1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional; Region: PRK05447" /db_xref="CDD:180089" misc_feature complement(1708756..1709136) /locus_tag="Acear_1605" /note="1-deoxy-D-xylulose 5-phosphate reductoisomerase; Region: DXP_reductoisom; pfam02670" /db_xref="CDD:190383" misc_feature complement(1708465..1708716) /locus_tag="Acear_1605" /note="1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; Region: DXP_redisom_C; pfam08436" /db_xref="CDD:192038" gene complement(1709164..1710222) /locus_tag="Acear_1606" /db_xref="GeneID:9513663" CDS complement(1709164..1710222) /locus_tag="Acear_1606" /note="COGs: COG0628 permease; InterPro IPR014227:IPR002549; KEGG: hor:Hore_07720 sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; SPTR: B8CW60 sporulation integral membrane protein YtvI; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: Domain of unknown function DUF20; TIGRFAM: sporulation integral membrane protein YtvI" /codon_start=1 /transl_table=11 /product="sporulation integral membrane protein YtvI" /protein_id="YP_003828177.1" /db_xref="GI:302392357" /db_xref="GeneID:9513663" /translation="MKPTYKLGLGILGIALLSLIFFEYLLIYFLPFIIAFLIASLIEP IVELLQTKLRLNRGLAVTICLGIILIIIILLITIFLSRLFVELTKLANNIPEFKTLGA RAQWVVKQNQNLSRLLLELELPETVKEVITQNLEHLYQQLRSMIQRGITTFLELLRGL PKFITILLVSLISTFFISRDKELINQTILRAFPRPWHKNINKLESEIMSAAIGFIRAE LILISITTVLMITGLLLLGSDYAISLGLVAGLLDLIPVIGPSLVILPWAGYSMIIGDI SFGVSLLAVLITVAVIRQLVEAKVIGENIGIHPLATLISMYLGVQILGIGGFFIGPAI LILLRAIIRAGFASVLIE" misc_feature complement(1709227..1710093) /locus_tag="Acear_1606" /note="Domain of unknown function DUF20; Region: UPF0118; cl00465" /db_xref="CDD:186015" gene complement(1710245..1711075) /locus_tag="Acear_1607" /db_xref="GeneID:9513664" CDS complement(1710245..1711075) /locus_tag="Acear_1607" /note="COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: tpd:Teth39_1219 phosphatidate cytidylyltransferase; PFAM: phosphatidate cytidylyltransferase; SPTR: C6Q752 Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family" /codon_start=1 /transl_table=11 /product="phosphatidate cytidylyltransferase" /protein_id="YP_003828178.1" /db_xref="GI:302392358" /db_xref="GeneID:9513664" /translation="MLNRRVGSALIGILLLVFILNTGGLLFLVAVLLLAAIGLNEFYE LAAVKGAKPNKILGIVSGLFLLVMGYLDFKGLIINSNLYLGIVLVLYILLLSNLFKEN RQTDSPILDTAVTLLGIIYVGGLFLYLILIYNFSSGGVNIGKRLIWLPILATWITDTL AYFTGLNFGRHKLAPNISPNKTIEGAVGGLVGSILLVAVAGLWLPLSFLDLKNRIILG TLVGIAAQLGDLVESAFKRDAQIKDSGNLIPGHGGVLDRFDSLLFVLPVTYYYFQLFS " misc_feature complement(1710251..>1710754) /locus_tag="Acear_1607" /note="Cytidylyltransferase family; Region: CTP_transf_1; cl00347" /db_xref="CDD:185926" gene complement(1711082..1711807) /locus_tag="Acear_1608" /db_xref="GeneID:9513665" CDS complement(1711082..1711807) /locus_tag="Acear_1608" /EC_number="2.5.1.31" /note="COGs: COG0020 undecaprenyl pyrophosphate synthase; InterPro IPR001441:IPR018520; KEGG: ate:Athe_1812 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: B9MKP7 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase" /codon_start=1 /transl_table=11 /product="undecaprenyl pyrophosphate synthetase" /protein_id="YP_003828179.1" /db_xref="GI:302392359" /db_xref="GeneID:9513665" /translation="METEEMPEHIAVIMDGNGRWAKEQGLSRSAGHKKGVQKLKKIIE IVNKLEIEHLTVFAFSTENWKRPKKEVDFLMRLFHRTFDNEVLDLHNSDVRIRVLGRR QGLPENIKAKIDEVVDLTNKNQGLNLNIALNYGGRSEIIDAAKSLAAKVKNGTVKLDD IDEEELSNELYTADIPDPELLIRPSGEKRISNFLLWQSAYAEFWFTDTYWPEFDKEEL LEAIAEYQRRERRFGGLKEKDSR" misc_feature complement(1711127..1711789) /locus_tag="Acear_1608" /note="Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS); homodimers which catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl...; Region: CIS_IPPS; cd00475" /db_xref="CDD:29593" misc_feature complement(1711763..1711765) /locus_tag="Acear_1608" /note="catalytic residue [active]" /db_xref="CDD:29593" misc_feature complement(1711751..1711762) /locus_tag="Acear_1608" /note="putative FPP diphosphate binding site; other site" /db_xref="CDD:29593" misc_feature complement(order(1711418..1711420,1711424..1711426, 1711469..1711471,1711490..1711492,1711571..1711579, 1711583..1711588,1711628..1711642)) /locus_tag="Acear_1608" /note="putative FPP binding hydrophobic cleft; other site" /db_xref="CDD:29593" misc_feature complement(order(1711199..1711201,1711211..1711213, 1711220..1711222,1711232..1711234,1711241..1711246, 1711325..1711327,1711352..1711354,1711361..1711363, 1711373..1711375,1711397..1711399)) /locus_tag="Acear_1608" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29593" misc_feature complement(order(1711241..1711243,1711259..1711261)) /locus_tag="Acear_1608" /note="putative IPP diphosphate binding site; other site" /db_xref="CDD:29593" gene complement(1711952..1712509) /locus_tag="Acear_1609" /db_xref="GeneID:9513666" CDS complement(1711952..1712509) /locus_tag="Acear_1609" /note="COGs: COG0233 Ribosome recycling factor; InterPro IPR002661; KEGG: hor:Hore_07680 ribosome recycling factor; PFAM: ribosome recycling factor; SPTR: B8CW56 Ribosome-recycling factor; TIGRFAM: ribosome recycling factor; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor" /codon_start=1 /transl_table=11 /product="ribosome recycling factor" /protein_id="YP_003828180.1" /db_xref="GI:302392360" /db_xref="GeneID:9513666" /translation="MIKQVEKKTQQKMEEVIDEVKDDFDQIRTGRAKPSLIEGITADY YGTKTPINQMAKVSAPEPRQLVIQPWDDGVLEDIEKAIMKSDLDLSPNNDGEVIRINI PKLTEEKRKEYVSLANDKAEEHRIEIRNLRREANDELEELETAGEISEDNYHRGLENI QDLTDEYIAKVDELLDKKEEAILAI" misc_feature complement(1711961..1712497) /locus_tag="Acear_1609" /note="Ribosome recycling factor (RRF). Ribosome recycling factor dissociates the posttermination complex, composed of the ribosome, deacylated tRNA, and mRNA, after termination of translation. Thus ribosomes are 'recycled' and ready for another round of...; Region: RRF; cd00520" /db_xref="CDD:29621" misc_feature complement(order(1712195..1712206,1712414..1712425)) /locus_tag="Acear_1609" /note="hinge region; other site" /db_xref="CDD:29621" gene complement(1712539..1713252) /locus_tag="Acear_1610" /db_xref="GeneID:9513667" CDS complement(1712539..1713252) /locus_tag="Acear_1610" /EC_number="2.7.4.22" /note="COGs: COG0528 Uridylate kinase; InterPro IPR001057:IPR011817:IPR015963:IPR001048; KEGG: hor:Hore_07670 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: UMP kinase; SPTR: B8CW55 Uridylate kinase; TIGRFAM: uridylate kinase; PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase" /codon_start=1 /transl_table=11 /product="uridylate kinase" /protein_id="YP_003828181.1" /db_xref="GI:302392361" /db_xref="GeneID:9513667" /translation="MAEAEFSRVIIKLSGEVLSGNQEYGIDPEFINSVAQEIKEVNET EVEVAIVVGGGNIFRGVAGSAKGMDRGTADYMGMLATVINALALQDALEKLEIETRVQ TAIAMREVAEPYIRRRAIRHLEKGRIVIFGAGTGNPFFSTDTTAALRAAEIDADAILM AKNVDGVYDSDPVENPDAVKFKELNYIDVINRGLGVMDSTAVSLCMDNEIPIIVFGLK EMENIKKVVTGKEIGTFVR" misc_feature complement(1712545..1713234) /locus_tag="Acear_1610" /note="UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control...; Region: AAK_UMPK-PyrH-Ec; cd04254" /db_xref="CDD:58620" misc_feature complement(order(1712740..1712745,1712749..1712751, 1712755..1712757,1712764..1712769,1712824..1712829, 1713088..1713096,1713205..1713210,1713217..1713219)) /locus_tag="Acear_1610" /note="putative nucleotide binding site [chemical binding]; other site" /db_xref="CDD:58620" misc_feature complement(order(1712827..1712835,1712839..1712844, 1712848..1712850,1713019..1713024,1713031..1713033, 1713073..1713078,1713088..1713096)) /locus_tag="Acear_1610" /note="uridine monophosphate binding site [chemical binding]; other site" /db_xref="CDD:58620" misc_feature complement(order(1712629..1712631,1712797..1712802, 1712809..1712811,1712836..1712844,1712848..1712850, 1712872..1712874,1712890..1712892,1712899..1712901, 1712911..1712913,1712953..1712955,1712983..1712985, 1713004..1713006,1713025..1713030,1713052..1713057)) /locus_tag="Acear_1610" /note="homohexameric interface [polypeptide binding]; other site" /db_xref="CDD:58620" gene complement(1713381..1714031) /locus_tag="Acear_1611" /db_xref="GeneID:9513668" CDS complement(1713381..1714031) /locus_tag="Acear_1611" /note="COGs: COG0264 translation elongation factor Ts; InterProIPR001816:IPR014039:IPR000449:IPR018101:IPR 009060; KEGG: aac:Aaci_1420 translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; SPTR: C1PV78 Elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts" /codon_start=1 /transl_table=11 /product="translation elongation factor Ts (EF-Ts)" /protein_id="YP_003828182.1" /db_xref="GI:302392362" /db_xref="GeneID:9513668" /translation="MGISAADVKELRAKTSAGILDCKKALKETDGDMEEAVKYLREKG ISEAEEKSERTAAEGLVHSYIHMNGTIGVLVEVNCETDFVAKNDAFKELVNNIAMHIA AANPKYLSREDVPEDVIEQEKEMLEKQALNEDKPEHIVEQIVEGRLEKFFNQNCLLEQ EYIRNDDKTVQELLTEKIAELGENINIRRFTRYELGEGIEVEEEDFAEEVKSEVGE" misc_feature complement(1713453..1714031) /locus_tag="Acear_1611" /note="elongation factor Ts; Reviewed; Region: tsf; PRK12332" /db_xref="CDD:183447" misc_feature complement(1713912..1714025) /locus_tag="Acear_1611" /note="Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members of the ubiquitination pathway, UV excision repair proteins, and certain protein kinases. Although its specific role is so far unknown, it has been...; Region: UBA; cl00153" /db_xref="CDD:193684" misc_feature complement(1713453..1713866) /locus_tag="Acear_1611" /note="Elongation factor TS; Region: EF_TS; pfam00889" /db_xref="CDD:189759" gene complement(1714130..1714930) /locus_tag="Acear_1612" /db_xref="GeneID:9513669" CDS complement(1714130..1714930) /locus_tag="Acear_1612" /note="COGs: COG0052 Ribosomal protein S2; InterPro IPR001865:IPR005706:IPR018130; KEGG: hor:Hore_07650 ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: B8CW53 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S2P" /protein_id="YP_003828183.1" /db_xref="GI:302392363" /db_xref="GeneID:9513669" /translation="MSVVTMKEMLESGVHFGHKTRRWNPKMESYIFTERNGIYIIDLQ QTEKLAEEAYNFVRDLASEGKQILFASTKKQAQETIEREATRCGMPYVKERWLGGMLT NYQTISKRIDRLEELEQMEEDGLFEVLPKKEVMELKRERDKLVRFLGGIRDMDGLPDA IFIADPRREEIAVAEANKLGIPIVAIVDTNCDPDLIDYVIPGNDDAIRAVKLLTGIMA DAVLEGKQGKQEQEAEVQEAQVEAEDVAEVEEEVQEDTAEVEETKEAE" misc_feature complement(1714262..1714906) /locus_tag="Acear_1612" /note="Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of...; Region: RPS2; cd01425" /db_xref="CDD:100106" misc_feature complement(order(1714397..1714399,1714406..1714408, 1714622..1714627,1714634..1714642,1714646..1714648, 1714820..1714828,1714853..1714858)) /locus_tag="Acear_1612" /note="rRNA interaction site [nucleotide binding]; other site" /db_xref="CDD:100106" misc_feature complement(order(1714340..1714351,1714391..1714393, 1714397..1714402)) /locus_tag="Acear_1612" /note="S8 interaction site; other site" /db_xref="CDD:100106" misc_feature complement(1714280..1714297) /locus_tag="Acear_1612" /note="putative laminin-1 binding site; other site" /db_xref="CDD:100106" gene complement(1715143..1715637) /locus_tag="Acear_1613" /db_xref="GeneID:9513670" CDS complement(1715143..1715637) /locus_tag="Acear_1613" /note="InterPro IPR003770; KEGG: hypothetical protein; PFAM: aminodeoxychorismate lyase; PFAM: YceG-like family" /codon_start=1 /transl_table=11 /product="aminodeoxychorismate lyase" /protein_id="YP_003828184.1" /db_xref="GI:302392364" /db_xref="GeneID:9513670" /translation="MARKVLLGIGILLTVVGLLLIATDSLELQQPGETDEKQVKQKID KKRIIREATELGMKFPEDLSKEEIKHQAKRVGLKLNSNNITSEKESNDNKPVRIEITS GATAGQVVQKLYQSKIIKDRQALLELIKKANLENKILAGEYEFDSDISVEKILLNITG NRDQ" misc_feature complement(<1715173..1715361) /locus_tag="Acear_1613" /note="proteins similar to Escherichia coli yceG; Region: yceG_like; cl00675" /db_xref="CDD:186139" gene complement(1715650..1716084) /locus_tag="Acear_1614" /db_xref="GeneID:9513671" CDS complement(1715650..1716084) /locus_tag="Acear_1614" /note="KEGG: taf:THA_1283 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828185.1" /db_xref="GI:302392365" /db_xref="GeneID:9513671" /translation="MLKILILSLGISCIAASLFLAYRQEKKVGHELRKREVRLNRLLQ QVNNLLDRLEKQYSTLEEEQKSDFVDTLDFKLKEDYHPDKKVESINQNLNKEDRKRED AAKTEKHKQINELLNSGFNYSEIAQHLNMGRREVELIHKLND" gene complement(1716107..1716301) /locus_tag="Acear_1615" /db_xref="GeneID:9513672" CDS complement(1716107..1716301) /locus_tag="Acear_1615" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828186.1" /db_xref="GI:302392366" /db_xref="GeneID:9513672" /translation="MGEFITPHTRIPRSIEAGKMQQQELANQMQKEDIKKQQQVNEAD DEEQNSDQEGIKGTYIDIKA" gene complement(1716321..1718171) /locus_tag="Acear_1616" /db_xref="GeneID:9513673" CDS complement(1716321..1718171) /locus_tag="Acear_1616" /note="COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: hor:Hore_16620 predicted polymerase, contains PALM domain, HD hydrolase domain and Zn-ribbon domain; PFAM: protein of unknown function DUF342; SPTR: B8CYP3 Predicted polymerase, contains PALM domain, HD hydrolase domain and Zn-ribbon domain; PFAM: protein of unknown function (DUF342)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828187.1" /db_xref="GI:302392367" /db_xref="GeneID:9513673" /translation="MREVKLEATNEAEAIQKALEELELQKDYSRDELDIKAELIEEEK GFLGFGAKKIYQVQVSIPEDGEEKASEEVEEKVEFQDGEVDLIVNEEGIFIQLTPPQG NGEEVSLVQIEDLLEAKEITEVDYDQVSEALTEDIYNEPIQVAQRKPELDRDAEIGVN LKNDGMEAYLSIKPALGGKKATLERIKSALAEAGVAFGIKEQKLKDLVDEDGVLKQEI EEVLIAKGAEPVKGSPAEIDFKFDLESEERQVRELENGSVDYLNLNKINNVKPGDVLA TKTPSQSGSPGTTVTGDKVEPEPVEDKSIPAGKNTKLSSDSLTLESEIEGQVIYERDK IDVVPVHTVQGDVDLSTGNIKFVGTVVIEGDVIDGMRVEAKEDIQVKGSVHAAELEAG EEILVKNGFIGKDKGELSADGDIKVKFIENGRVVTDNDLIVTEAIMHSDIDAARIIRV ENKGLIVGGKIRAGREIEAKVVGSNLGTKTELYVGVTPELRDKYNQLKDELADYQQEL EEAVKTIKYLKKKQEQNDGQLSDRDREVMGQKTRARFQTAKEIEDLKEDKESLEKRLD EGKNGRIKVQDTLHSGVKLTIGTEVKRISKKLTNVQYYIEDGEVNKGSYS" misc_feature complement(1716342..1717697) /locus_tag="Acear_1616" /note="Protein of unknown function (DUF342); Region: DUF342; pfam03961" /db_xref="CDD:146542" gene complement(1718188..1718970) /locus_tag="Acear_1617" /db_xref="GeneID:9513674" CDS complement(1718188..1718970) /locus_tag="Acear_1617" /note="COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR000943:IPR014284:IPR012845:IPR011991:IPR 007627:IPR007624:IPR007630:IPR013325:IPR013324; KEGG: hmo:HM1_2251 RNA polymerase sigma factor, FliA/whig family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: B0THD2 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily" /protein_id="YP_003828188.1" /db_xref="GI:302392368" /db_xref="GeneID:9513674" /translation="MARPKDKTEQKLWIEFKEHNNQQAKEELMLRFMPLVKYVANRVA INLPDKFEFEDLQNYGIIGLIDAIERFDHRRGMKFSTYAISRIRGSIIDQLRRLDWVP TTIRRKAKQVAEINSELANKLGRLPTDEEIRQELDLDSDEYSQLMSEINIPQETSLDS FINSRQADGVTLIEVIADEDAARPEQTFRYEEIKRILGEAIEKLKPQERKVVTLYYYE GLNLTEIGEVLEVTTARISQLHTKAIYRLRGYLSRKKEELLE" misc_feature complement(1718194..1718961) /locus_tag="Acear_1617" /note="RNA polymerase sigma factor WhiG; Reviewed; Region: PRK06288" /db_xref="CDD:180512" misc_feature complement(1718671..1718889) /locus_tag="Acear_1617" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature complement(1718416..1718652) /locus_tag="Acear_1617" /note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539" /db_xref="CDD:146934" misc_feature complement(1718227..1718391) /locus_tag="Acear_1617" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cd06171" /db_xref="CDD:100119" misc_feature complement(order(1718239..1718241,1718245..1718250, 1718254..1718262,1718266..1718271,1718275..1718277, 1718305..1718310,1718326..1718328,1718356..1718358)) /locus_tag="Acear_1617" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:100119" gene complement(1718986..1719393) /locus_tag="Acear_1618" /db_xref="GeneID:9513675" CDS complement(1718986..1719393) /locus_tag="Acear_1618" /note="KEGG: bca:BCE_A0016 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828189.1" /db_xref="GI:302392369" /db_xref="GeneID:9513675" /translation="MDGLTKSLSIIFAAAVFLLVAIITVANGLSLVIIFKRSLLSSLL FGVLGGVIGYLVTNMTRINKQQQEVNAVSQETAAQQYAAQSQETGEDKTAKDEFQPLD LEEIDYDEQQEVEELAEQDPEKLAKMVQNIQEE" gene complement(1719410..1719892) /locus_tag="Acear_1619" /db_xref="GeneID:9513676" CDS complement(1719410..1719892) /locus_tag="Acear_1619" /note="COGs: COG1871 Chemotaxis protein; stimulates methylation of MCP protein; InterPro IPR005659; KEGG: hor:Hore_07640 chemotaxis protein CheD; PFAM: CheD family protein; SPTR: B8CW52 Chemotaxis protein CheD; PFAM: CheD" /codon_start=1 /transl_table=11 /product="CheD, stimulates methylation of MCP protein" /protein_id="YP_003828190.1" /db_xref="GI:302392370" /db_xref="GeneID:9513676" /translation="MSKIRVKMADLNVGKKNDVLITSGLGSCVGVALYDSHSQIGGLA HIMLPEVPDNRENNNPAKYADTAVELLLEEMKKIGANTRRLKAKIAGGAQMFDFDNSD SNMKIGTRNVKAVKRILREENIRILGSDVGRDYGRTMEFYTEDGRTLIKTVKGEDQVL " misc_feature complement(1719413..1719892) /locus_tag="Acear_1619" /note="CheD chemotactic sensory transduction; Region: CheD; cl00810" /db_xref="CDD:193944" gene complement(1719889..1720527) /locus_tag="Acear_1620" /db_xref="GeneID:9513677" CDS complement(1719889..1720527) /locus_tag="Acear_1620" /note="COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: hor:Hore_07630 CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; SPTR: A1HN13 CheC, inhibitor of MCP methylation; PFAM: CheC-like family" /codon_start=1 /transl_table=11 /product="CheC, inhibitor of MCP methylation" /protein_id="YP_003828191.1" /db_xref="GI:302392371" /db_xref="GeneID:9513677" /translation="MEDGVQTDLTELSDIQLDALKEIANIGAGNAATAFSQMLDRRID MSVPKVDIMPLNEIPEILGGPESLIAGILVEVMGEIPGKILFALDEASAKRMTALLVD RRLNNVEEQTEEIQESTLKEMGNILTNSYLNALSRMTNLSSVPSVPGLAQDMAGAILE VAFLQVGYIGDYALVVETEFWDGKDKISGNFFFIPTPESLNKILSKLGVGQI" misc_feature complement(1719898..1720509) /locus_tag="Acear_1620" /note="Chemotaxis protein CheC, inhibitor of MCP methylation [Cell motility and secretion / Signal transduction mechanisms]; Region: CheC; COG1776" /db_xref="CDD:31962" misc_feature complement(1720372..1720485) /locus_tag="Acear_1620" /note="CheC-like family; Region: CheC; pfam04509" /db_xref="CDD:191012" gene complement(1720574..1721254) /locus_tag="Acear_1621" /db_xref="GeneID:9513678" CDS complement(1720574..1721254) /locus_tag="Acear_1621" /note="COGs: COG5581 glycosyltransferase; InterPro IPR009875; KEGG: hor:Hore_16650 type IV pilus assembly PilZ; PFAM: type IV pilus assembly PilZ; SPTR: B8CYP6 type IV pilus assembly PilZ; PFAM: PilZ domain" /codon_start=1 /transl_table=11 /product="type IV pilus assembly PilZ" /protein_id="YP_003828192.1" /db_xref="GI:302392372" /db_xref="GeneID:9513678" /translation="MANLSLEIDQSVEVEVKSGSYTGSYICKVIDIAEDIIQLTLPIK KEAVVPLSVGTRLEVSFSDECAKYSFRTKVLSRHKANNVAVCEVEFPAKVNKIQRRDF VRVPIREEVEYRQLELDDLQELEDEEDKQEDFKLTFTRDISGGGLLLAVQEYISPNSF VELKFDIEDFSFDKVIGEVLRVDQLAEEDEKIGLAIKYINISQSEQDEIVQWVLQKQL ELHKKGLL" misc_feature complement(1720586..1721239) /locus_tag="Acear_1621" /note="c-di-GMP-binding protein [Signal transduction mechanisms]; Region: COG5581" /db_xref="CDD:35140" misc_feature complement(1721018..1721236) /locus_tag="Acear_1621" /note="Flagellar protein YcgR; Region: YcgR_2; pfam12945" /db_xref="CDD:193418" misc_feature complement(1720610..1720963) /locus_tag="Acear_1621" /note="PilZ domain; Region: PilZ; cl01260" /db_xref="CDD:194086" gene complement(1721279..1722169) /locus_tag="Acear_1622" /db_xref="GeneID:9513679" CDS complement(1721279..1722169) /locus_tag="Acear_1622" /note="COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: hor:Hore_16660 cobyrinic acid ac-diamide synthase; PFAM: cobyrinic acid ac-diamide synthase; SPTR: B8CYP7 cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain" /codon_start=1 /transl_table=11 /product="cobyrinic acid ac-diamide synthase" /protein_id="YP_003828193.1" /db_xref="GI:302392373" /db_xref="GeneID:9513679" /translation="MKDQAHGLRELVQKQSTTHQEDQKKPEEELARIYSVASGKGGVG KTNFTVNLSLALQAKDRRVGIIDADLGMANIDVVLGLTPQYNLGHVIKGKKKIEEIIV EGPQNLEVIPGTSGAEELANLTDYQLQNLINSWQVLENKYDIILIDIGAGISKSVIDF ALAADEIIIISTPEPTSVTDAYGLIKTIVNQQQISEINLVVNRTESDREGKRISNRVT EVVNDFLEIQVNVLGTIPEDKNVIKAVKRQHPFWLEFPNSKAANAIKEIRNQLLDIKE ENTSTGVKGFFSKLFGLTDK" misc_feature complement(1721294..1722076) /locus_tag="Acear_1622" /note="Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]; Region: flhG; COG0455" /db_xref="CDD:30803" misc_feature complement(1721378..1722073) /locus_tag="Acear_1622" /note="Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a...; Region: MinD; cd02036" /db_xref="CDD:73299" misc_feature complement(1722029..1722055) /locus_tag="Acear_1622" /note="P-loop; other site" /db_xref="CDD:73299" misc_feature complement(order(1721462..1721464,1722029..1722040, 1722044..1722046)) /locus_tag="Acear_1622" /note="ADP binding residues [chemical binding]; other site" /db_xref="CDD:73299" misc_feature complement(1721963..1721971) /locus_tag="Acear_1622" /note="Switch I; other site" /db_xref="CDD:73299" misc_feature complement(1721714..1721728) /locus_tag="Acear_1622" /note="Switch II; other site" /db_xref="CDD:73299" gene complement(1722176..1723258) /locus_tag="Acear_1623" /db_xref="GeneID:9513680" CDS complement(1722176..1723258) /locus_tag="Acear_1623" /note="COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR020006:IPR000897:IPR003593; KEGG: hor:Hore_16670 GTP-binding signal recognition particle SRP54 G-domain protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; SPTR: A1HN19 GTP-binding signal recognition particle SRP54, G-domain; TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FlhF" /protein_id="YP_003828194.1" /db_xref="GI:302392374" /db_xref="GeneID:9513680" /translation="MEVKRYRGENMQEAMFKVKADLGSDAIILHTRKFKEGGFLGLFG TEMVEVVATIEDEVHNTKDKEEKQKVESELNQVKQMMGNVLQKLEENKLQSSYTNLPE NLKEVVDRLLAQGITDELATEILIAVNDKLGPKEIEDKEIIKSLFSEEIKARLNPVSP ITLSDQESKVVAFIGPTGVGKTTTVAKLAADFSLTKNKDVGLVTADTYRIAAVEQLKT YSEIINVPLEVVYNSAELEQALDKFAAKDLVLVDTAGRSQNNEMHMSELDALLAKIDV AEKHLVLSAITKFKDLLDIILSFQQIGLDKFIFTKLDETKDLGMLVNIIDQFDAELSY ITNGQNVPEDIEVFKPEKIVNSLLEE" misc_feature complement(1722179..1723258) /locus_tag="Acear_1623" /note="flagellar biosynthesis regulator FlhF; Validated; Region: flhF; PRK05703" /db_xref="CDD:180213" misc_feature complement(1722254..1722751) /locus_tag="Acear_1623" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" gene complement(1723259..1725331) /locus_tag="Acear_1624" /db_xref="GeneID:9513681" CDS complement(1723259..1725331) /locus_tag="Acear_1624" /note="COGs: COG1298 Flagellar biosynthesis pathway component FlhA; InterPro IPR001712:IPR006301; KEGG: hor:Hore_16680 flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; SPTR: B8CYP9 Flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FlhA" /protein_id="YP_003828195.1" /db_xref="GI:302392375" /db_xref="GeneID:9513681" /translation="MAAPSDNLAPASFTQYSDIIFALAVVTIVVMFIIPLPTFLLDVL LSANIAFGLTILLISMYTVEPLEFSVFPTLLLIATLFRLALNVSTTRLILGEAYAGEV ILSFGEFVVGGNYVVGFVIFIILIVIQYVVITKGAERVAEVTARFTLDALPGKQMSID ADLNAGLITEAEARAQRKKLRDESDFYGAMDGASKFVKGDAIAGIIITLINVIGGLVI GVLQQGMAVTEALQTYTLLTIGDGLVSQIPALLISTAAGIVVTRAASESNLGEDLSNQ MLAQPKSLLIVSGVLTLFAFVSGLPTIPFLLLAVMLAGLGYTLYQTQQEIVEEETASE EEEEVAQYEEQEDIDELLKVDPMEVEVGYNLIPLVVPEQGGDLLDRVSMIRRQCALEM GIIIPPIRIRDNMQLEPDHYQVNLRGIEIASHEIMVNHYLAMDSGMVTEEIDGIETTE PAFDLPALWISEDQKEEAELAGYTIVDPPSVIATHLTELIKDHAHELLGRQEVQELID NLKDDYSAVIDELIPELMTIGEIQKVLQNLLKEGIPVRDLVTILETLADEARNTKDID ILTEYARQALSRQISELYKDDKNNIHVLTLDPQLEERISDSIERTEQGAYVTLTPETA QQLFNNLSQKIQEMMQQGYDPIVLTSPIVRYHFKDLTEQVASDLTVLSFNELEPDLNV QTVGMVSL" misc_feature complement(1723262..1725331) /locus_tag="Acear_1624" /note="flagellar biosynthesis protein FlhA; Validated; Region: flhA; PRK06012" /db_xref="CDD:180350" misc_feature complement(1723268..1725286) /locus_tag="Acear_1624" /note="Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion]; Region: FlhA; cl07980" /db_xref="CDD:195651" gene complement(1725334..1726395) /locus_tag="Acear_1625" /db_xref="GeneID:9513682" CDS complement(1725334..1726395) /locus_tag="Acear_1625" /note="COGs: COG1377 Flagellar biosynthesis pathway component FlhB; InterPro IPR006135:IPR006136; KEGG: hor:Hore_16690 flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; SPTR: B8CYQ0 Flagellar biosynthetic protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: type III secretion protein, YscU/HrpY family; flagellar biosynthetic protein FlhB" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FlhB" /protein_id="YP_003828196.1" /db_xref="GI:302392376" /db_xref="GeneID:9513682" /translation="MPAEEKTEDPTPKRRQEAREEGQVAQSQELSMAFTLLFSFIMLF FLMDNILYESMEFMNKYFTDYMTMTLNLQTFYTLLLELMQFIFRLVAPLMFVVALVGV VVGLLQTGFLFTPTSLQPDPSKLDPVSGFKQIFSKQTVAEFFKSILKISIVGGIAYLT IKDNLPQLIMFSKMGLNQVVSLIGSIIYSLAIKVSLILILLGILDFIYQKWEHEQQLK MTKQEVKEEKKQTEGNPEIKKRQKEKQQEMAMNRMMESVPEADVVITNPTHIAVAIKF DIDNMDAPIVVAKGKGEIAHKIKKKAEECGIEIVEEKPLARALYGQVEIEEEIPMELY QAVAEILAYVYQLNDERRY" misc_feature complement(1725340..1726386) /locus_tag="Acear_1625" /note="flagellar biosynthesis protein FlhB; Reviewed; Region: flhB; PRK05702" /db_xref="CDD:180212" misc_feature complement(1725343..1726383) /locus_tag="Acear_1625" /note="Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]; Region: FlhB; cl12017" /db_xref="CDD:196301" gene complement(1726407..1727183) /locus_tag="Acear_1626" /db_xref="GeneID:9513683" CDS complement(1726407..1727183) /locus_tag="Acear_1626" /note="COGs: COG1684 Flagellar biosynthesis pathway component FliR; InterPro IPR002010:IPR006303; KEGG: hor:Hore_16700 flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; SPTR: B8CYQ1 Flagellar biosynthetic protein fliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FliR" /protein_id="YP_003828197.1" /db_xref="GI:302392377" /db_xref="GeneID:9513683" /translation="MDLALIELIYQGALIMLRLTGLFLTAPFFGSRVIPKRIKAALAF LVTLILSPVVDGSNLELPTNILILLFNFLSELTIGLIFGFITILIFASIQLAGQMISM RMGLAMANIMDPMNGSSIAVIGQFKNVLATLLFLVINGHHQLLRALKHSFDVIPLTGL RISDALFMKLLRMAGDLFPLAFQIALPIIAALFLTDVAFGLVARTVPQMNVFVMGLPT KLLVGSLLLLITVPVYISLIRGLFDDLFANIDRIISILGN" misc_feature complement(1726443..1727171) /locus_tag="Acear_1626" /note="Bacterial export proteins, family 1; Region: Bac_export_1; cl00734" /db_xref="CDD:186167" gene complement(1727197..1727466) /locus_tag="Acear_1627" /db_xref="GeneID:9513684" CDS complement(1727197..1727466) /locus_tag="Acear_1627" /note="COGs: COG1987 Flagellar biosynthesis pathway component FliQ; InterPro IPR002191:IPR006305; KEGG: hor:Hore_16710 flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; SPTR: B8CYQ2 Flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ; Tat (twin-arginine translocation) pathway signal sequence" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FliQ" /protein_id="YP_003828198.1" /db_xref="GI:302392378" /db_xref="GeneID:9513684" /translation="MTEQLVIELGRRALLQVVMVTAPMLGLGLLAGLAISILQATTQI QEQTLVFIPKILAVIVAIIIFGPWMLNTLVDFVHNLFLNIPNYVG" misc_feature complement(1727200..1727466) /locus_tag="Acear_1627" /note="Bacterial export proteins, family 3; Region: Bac_export_3; cl00867" /db_xref="CDD:186229" gene complement(1727490..1728263) /locus_tag="Acear_1628" /db_xref="GeneID:9513685" CDS complement(1727490..1728263) /locus_tag="Acear_1628" /note="COGs: COG1338 Flagellar biosynthesis pathway component FliP; InterPro IPR005838:IPR005837; KEGG: hor:Hore_16720 flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; SPTR: B8CYQ3 Flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FliP" /protein_id="YP_003828199.1" /db_xref="GI:302392379" /db_xref="GeneID:9513685" /translation="MINKRWKFIFKVSILLLLIIISSQGIVEAAPTFEIPDVNLSIET GEGSQNLALPLQIMLLLTVLSLAPAILIMLTSFVRIAVVLSLIRRALATRRMPPNQVI IGLAIFLTIFVMAPVWGQIYDTAVQPYLDDEINQMQAYEQGIKPLRKFMFKQTREKDI ALFVDLGEIERPQNQMEIPTYVLIPAFIISELRIAFQIGFIIYLPFIVIDMIVASTLM SMGMMMLPPVMISLPFKILLFVLVDGWYLVIKSLIKTFN" misc_feature complement(1727496..1728179) /locus_tag="Acear_1628" /note="FliP family; Region: FliP; cl00593" /db_xref="CDD:186095" gene complement(1728256..1728600) /locus_tag="Acear_1629" /db_xref="GeneID:9513686" CDS complement(1728256..1728600) /locus_tag="Acear_1629" /note="KEGG: ctc:CTC01663 flagellar formation protein; SPTR: Q893Z2 Putative flagellar formation protein; PFAM: Flagellar biosynthesis protein, FliO" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828200.1" /db_xref="GI:302392380" /db_xref="GeneID:9513686" /translation="MSFSWQLIKMVFYLSLIIILFFIVIKFIKKQRHLQGFNRNLQIL EKIYFNSDQALYLVKVIDEVWVLGISKERVELLSKVTDLDKIEKLTAELEDNNLKQSF KKFFNRDGCNND" misc_feature complement(1728274..>1728504) /locus_tag="Acear_1629" /note="Flagellar biosynthesis protein, FliO; Region: FliO; cl01247" /db_xref="CDD:194078" gene complement(1728659..1728757) /locus_tag="Acear_1630" /pseudo /db_xref="GeneID:9513687" gene complement(1728764..1729990) /locus_tag="Acear_1631" /db_xref="GeneID:9513688" CDS complement(1728764..1729990) /locus_tag="Acear_1631" /note="COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR001172:IPR012826:IPR007597:IPR001543; KEGG: hor:Hore_16740 CheC, inhibitor of MCP methylation; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; SPTR: B8CYQ5 CheC, inhibitor of MCP methylation; TIGRFAM: flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein FliN" /codon_start=1 /transl_table=11 /product="CheC, inhibitor of MCP methylation / FliN fusion protein" /protein_id="YP_003828201.1" /db_xref="GI:302392381" /db_xref="GeneID:9513688" /translation="MNEEVLSQDEIDALLNDDSNNDETEAVESNEQDDNNSELENELT DKEKDAIGEIGNISMGSAATALYSLLDETVEITAPEVELVTFQKLIQEYERPCVVVDV EYIEGLEGSNLLIIEQQDAAIISDLMMGGDGNNPDAELNELHLSAVSEAMNQMMGSAS TSMSTIMQGDKVNISPPNAELLTLNTDEIKSRSFQPDDEVVKVSFDLTIGEVIDSEIL QLMPLDFAKELVAYLTDPDPSERAEEPQESGETAADNISQNEPATKSKAEAEQQPQQQ TAQQQPQQQQAAQQLANSKSGAVSREESVDVQSVEFSQLGEGQTEQGQSKIDLIKDVP LEVTVRLGKTKMLIKDILELGNGSVIELDKLAGESVDLLVNGKLIAKGEVVVIDENFG FRVTDIVSPMERITNL" misc_feature complement(1728767..1729990) /locus_tag="Acear_1631" /note="flagellar motor switch protein; Validated; Region: PRK08119" /db_xref="CDD:181236" misc_feature complement(1729742..1729852) /locus_tag="Acear_1631" /note="CheC-like family; Region: CheC; pfam04509" /db_xref="CDD:191012" misc_feature complement(1729457..1729564) /locus_tag="Acear_1631" /note="CheC-like family; Region: CheC; pfam04509" /db_xref="CDD:191012" misc_feature complement(1728788..1729015) /locus_tag="Acear_1631" /note="Surface presentation of antigens (SPOA); Region: SpoA; cl00819" /db_xref="CDD:186206" gene complement(1729983..1730984) /locus_tag="Acear_1632" /db_xref="GeneID:9513689" CDS complement(1729983..1730984) /locus_tag="Acear_1632" /note="COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689:IPR001543:IPR005479; KEGG: hor:Hore_16750 flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; SPTR: B8CYQ6 Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliM" /protein_id="YP_003828202.1" /db_xref="GI:302392382" /db_xref="GeneID:9513689" /translation="MSSDRVLSQNEIDDLLQEFNSGDVEAEELKDTEEKSVKAYDFKH PDKLSKDQLRTLRIIYENFARLLNTSLSTQLRTMIHVELNSIEQLSYDEFIRSLPQPT IMSICDFNPLAGEFILEINPRLGYAIVERLFGGQGTPPNNIRDFTDIEEMVLKKVLKQ NLSAFVEAWENVIDLKPRIKNLESNPQFTQIVPGNDMVILATFDAKIAEAEGLINVCI PYIVLEPIVSKLNAQYWFSTSRDSASSEELNKLKDRLSKAKLPVIANLGTTNITVADL LDLQPGDVIRMDQKATKEAVVKVGNKEKFIGKPGVVGSKLAIEISSVLDKEEAVEDE" misc_feature complement(1729986..1730984) /locus_tag="Acear_1632" /note="flagellar motor switch protein FliM; Validated; Region: fliM; PRK06666" /db_xref="CDD:180651" misc_feature complement(1730004..1730234) /locus_tag="Acear_1632" /note="Surface presentation of antigens (SPOA); Region: SpoA; cl00819" /db_xref="CDD:186206" gene complement(1730996..1731445) /locus_tag="Acear_1633" /db_xref="GeneID:9513690" CDS complement(1730996..1731445) /locus_tag="Acear_1633" /note="COGs: COG1580 Flagellar basal body-associated protein; InterPro IPR005503; KEGG: hor:Hore_16760 flagellar basal body-associated protein FliL; PFAM: flagellar basal body-associated protein FliL; SPTR: B8CYQ7 Flagellar basal body-associated protein FliL; PFAM: Flagellar basal body-associated protein FliL" /codon_start=1 /transl_table=11 /product="flagellar basal body-associated protein FliL" /protein_id="YP_003828203.1" /db_xref="GI:302392383" /db_xref="GeneID:9513690" /translation="MSEDSGHNFKLMLVVMVLLSLLIAAGTSYFMLQQLGGNSQSSSQ ASESVAELGPTHKAGEFTVNLSDNRRYLRMNLVLEVSNKDVINKLETRNPQVRDAVIS IVRTKKPQDINTQAGIKDLREQIRNELNKFIAEGKVTNVFFTQFVVQ" misc_feature complement(1731035..1731271) /locus_tag="Acear_1633" /note="Flagellar basal body-associated protein FliL; Region: FliL; cl00681" /db_xref="CDD:193906" gene complement(1731438..1732184) /locus_tag="Acear_1634" /db_xref="GeneID:9513691" CDS complement(1731438..1732184) /locus_tag="Acear_1634" /note="COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: hor:Hore_16770 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; SPTR: B8CYQ8 OmpA/MotB domain protein; PFAM: OmpA family" /codon_start=1 /transl_table=11 /product="OmpA/MotB domain protein" /protein_id="YP_003828204.1" /db_xref="GI:302392384" /db_xref="GeneID:9513691" /translation="MSRRKKRRNNDESDDSNWLTTYGDMMTLLLAFFVLLYSFSSVDV QKFRNVVEALQGNLGVLKGGKTISSSDLITAGVRDENLGMPELNRINQKITSYLQEQE LEDEIKVEMTERGLTIRFTGKVLFDIGRATIKEDAYSILDKISGIISEVPNQIMVEGH TDNLPISNSRFPSNWELSTARATEVVKYFIEENSITPAKLSAAGYSKYKPVKPNDSPE NRALNRRVDVILLKREFSEASRQKGGKLDE" misc_feature complement(1731483..1732184) /locus_tag="Acear_1634" /note="flagellar motor protein MotS; Reviewed; Region: PRK06925" /db_xref="CDD:180754" misc_feature complement(1731495..1731815) /locus_tag="Acear_1634" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature complement(order(1731513..1731515,1731525..1731527, 1731654..1731656,1731663..1731668,1731678..1731680, 1731699..1731704,1731798..1731803)) /locus_tag="Acear_1634" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene complement(1732171..1732986) /locus_tag="Acear_1635" /db_xref="GeneID:9513692" CDS complement(1732171..1732986) /locus_tag="Acear_1635" /note="COGs: COG1291 Flagellar motor component; InterPro IPR002898:IPR000540; KEGG: hor:Hore_16780 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: B8CYQ9 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel family" /codon_start=1 /transl_table=11 /product="MotA/TolQ/ExbB proton channel" /protein_id="YP_003828205.1" /db_xref="GI:302392385" /db_xref="GeneID:9513692" /translation="MDLDLATMGGLIVGALLIAGAIVLGGSPIIFISGTSFLMVVGGT LAAATVSYSFKHIQDLIGILKVAFYEQQTNPQEIISVLVSFAEKARREGLLALEDEAN QLDDDFLQKGIQLVVDGTDSELVRSILETELAFLEERHATSRGIFETMGELSPAFGMM GTLVGLIQMLSKLENPENVGGGLATALITTFYGTVMANLVFIPLAKKLRMKSEEEILV KEVMIEGILSIQAGENPRIVEEKLKAFLSGAGREVLEEEEIEGEMAVENNVAP" misc_feature complement(1732234..1732980) /locus_tag="Acear_1635" /note="MotA/TolQ/ExbB proton channel family; Region: MotA_ExbB; cl00568" /db_xref="CDD:186086" gene complement(1733014..1733205) /locus_tag="Acear_1636" /db_xref="GeneID:9513693" CDS complement(1733014..1733205) /locus_tag="Acear_1636" /note="InterPro IPR009384; KEGG: tte:TTE1432 hypothetical protein; PFAM: flagellar FlbD family protein; SPTR: C6P7Q8 Flagellar FlbD family protein; PFAM: Flagellar protein (FlbD)" /codon_start=1 /transl_table=11 /product="flagellar FlbD family protein" /protein_id="YP_003828206.1" /db_xref="GI:302392386" /db_xref="GeneID:9513693" /translation="MIEVTRLGGCEVVVNAEMIEFIESTPDTVLSLVSGKKIVVTEDV EVVKERVINYKRELNKVVD" misc_feature complement(1733035..1733205) /locus_tag="Acear_1636" /note="Flagellar protein (FlbD); Region: FlbD; cl00683" /db_xref="CDD:153933" gene complement(1733279..1734952) /locus_tag="Acear_1637" /db_xref="GeneID:9513694" CDS complement(1733279..1734952) /locus_tag="Acear_1637" /note="COGs: COG1749 Flagellar hook protein FlgE; InterProIPR020013:IPR001444:IPR011491:IPR010930:IPR 001969:IPR019776; KEGG: hor:Hore_16800 flagellar hook protein FlgE, epsilon proteobacterial; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein; SPTR: B8CYR1 Flagellar hook protein FlgE, epsilon proteobacterial; TIGRFAM: flagellar hook-basal body protein; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: flagellar hook protein FlgE, epsilon proteobacterial; flagellar hook-basal body proteins" /codon_start=1 /transl_table=11 /product="flagellar hook-basal body protein" /protein_id="YP_003828207.1" /db_xref="GI:302392387" /db_xref="GeneID:9513694" /translation="MMRSMYAGVSGLKAHQTKMDVIGNNISNVNTTGYKGSRVTFKEM LNQTMEGASAPQDGRGGTNPQQIGLGVSLGSIDNNMETGNLQSTGKMTDVALQGEGFF IVNDGTKNLYTRAGNLSFDEEGYLTNSSNGNRVQGWTADEDGTIDKTNAANLEDISLD ESMDASATTEAKYKDNLNPTLEELNLTEGSDVFEIDNGATDNINVSLSEGENENEWNF TLSADDPDTEFVASSGSNTLSGTIQLNSDGTVSDIVDSSGSSFTDSGGLATPDIEVNQ VAGTAGSTYIELPDFSSSTPHVNASTLFDNTNDGGTTADAITNNTRTITTNVYDSQGA EHTVTMDITKVGANDWQIAESSIDVTDADINDDNGDGDLDWLGGSDHTIQFDADGNID SGTEATLTFDPATGAADGQEVTLDFSSLTQFDGDMTAGFDTADGYPQGSLESFTIDGS GTITGSYDNGYNKALAKIGVATFSNPAGLSKEGDTLFDTSNNSGDPQVGQAGIGGRGM IAPGSLEMSNVDLARQFTEMITAQRGFQSNSKAISTSDQMLQTLVNLKR" misc_feature complement(<1734431..1734952) /locus_tag="Acear_1637" /note="flagellar hook protein FlgE; Validated; Region: flgE; PRK08425" /db_xref="CDD:181421" misc_feature complement(1734848..1734940) /locus_tag="Acear_1637" /note="Flagella basal body rod protein; Region: Flg_bb_rod; cl15245" /db_xref="CDD:197453" misc_feature complement(1733642..1733971) /locus_tag="Acear_1637" /note="Flagellar basal body protein FlaE; Region: FlaE; pfam07559" /db_xref="CDD:191784" misc_feature complement(1733345..1733620) /locus_tag="Acear_1637" /note="flagellar basal-body rod protein FlgF; Region: flgF; TIGR02490" /db_xref="CDD:188226" gene complement(1735045..1735431) /locus_tag="Acear_1638" /db_xref="GeneID:9513695" CDS complement(1735045..1735431) /locus_tag="Acear_1638" /note="InterPro IPR013367; KEGG: hor:Hore_16810 flagellar operon protein; SPTR: B8CYR2 Flagellar operon protein; TIGRFAM: flagellar operon protein; PFAM: protein of unknown function (DUF3766); TIGRFAM: flagellar operon protein" /codon_start=1 /transl_table=11 /product="flagellar operon protein" /protein_id="YP_003828208.1" /db_xref="GI:302392388" /db_xref="GeneID:9513695" /translation="MNNRIYSNRRIAPLQQSNKTEKTEQKKSRKSFNEILQKQLQEEA GIKFSGHAKKRLESRNIDLTAQDMQKLEKAVTKAETKGAKESLVMTDKVAYIVSVENK TVITAVDDQNMKENVFTNIDSAVIMD" misc_feature complement(1735051..1735341) /locus_tag="Acear_1638" /note="Protein of unknown function (DUF3766); Region: DUF3766; cl11797" /db_xref="CDD:164263" gene complement(1735453..1735869) /locus_tag="Acear_1639" /db_xref="GeneID:9513696" CDS complement(1735453..1735869) /locus_tag="Acear_1639" /note="COGs: COG1843 Flagellar hook capping protein; InterPro IPR005648; KEGG: hor:Hore_16820 flagellar hook capping protein; PFAM: flagellar hook capping protein; SPTR: B8CYR3 Flagellar hook capping protein; PFAM: Flagellar hook capping protein" /codon_start=1 /transl_table=11 /product="flagellar hook capping protein" /protein_id="YP_003828209.1" /db_xref="GI:302392389" /db_xref="GeneID:9513696" /translation="MAISEIASASNANVEGTGKQTEDSNKMGKDEFLELFVTQLKNQN PLEPMDNKEFIAQTAQFTSMEQMKNMNQNLEKFLGMQKLTQVSSLIGKEVKALDSDSG EEITGEVEKVKMADSGPKLIINGNEYEMGSVNEILG" misc_feature complement(1735492..1735821) /locus_tag="Acear_1639" /note="Flagellar hook capping protein; Region: FlgD; cl04347" /db_xref="CDD:194838" gene complement(1735885..1737531) /locus_tag="Acear_1640" /db_xref="GeneID:9513697" CDS complement(1735885..1737531) /locus_tag="Acear_1640" /note="InterPro IPR001635; KEGG: hypothetical protein; PFAM: flagellar hook-length control protein; SPTR: A0BIX7 Chromosome undetermined scaffold_11, whole genome shotgun sequence; PFAM: Flagellar hook-length control protein FliK" /codon_start=1 /transl_table=11 /product="flagellar hook-length control protein" /protein_id="YP_003828210.1" /db_xref="GI:302392390" /db_xref="GeneID:9513697" /translation="MEAAQLLQLNSSSQTVNNSSFQTVENSKSGSSFLQKLNNAAVGQ KQKQQSGQLLNQNGIDSVKDLKQNLSQEELKKFQRLLNEDTDLDSIKLKKLFDKDLDL NLNQTELQKLKKLLTEDGFEITEEELKDLLDSIGSIYQELMELDINKLSSLSEAEQSE LKQLKADLLAAIKEFKLQLKNLKEIDAKQLELLQQQSTKEQHQIKATKQFKENLLQKL AELKKLAGKMQKQRSAAGLKSGQQNQQLQQISKMLKQLTNSDSKLSKLLQKYGIAGEQ IEVETKKQQAKVKNQQSSDGKNAKDNAASNQKLKGKKESKSQDNSDKSSLKQLLESQD KETKDKKVKVRLSSDKQKLKAESFNAAKASAEDQMKVKNNVRQNIVNSKFMNVNSNLQ GVDQTKVVNQVLQQLEQLKSLGKNELTLKLKPDSLGKVNLKMAVSDGVLTTKVMAENY QVKKAIEAQLHQLKNALAEKNLEVGEMVVEVGSEEDFSSFQEQESFTQQEFSGQQQNR QSQQELNPELLMELGEIEEPIEIDSAVDSSLGVDSIDYVI" misc_feature complement(1736116..1736292) /locus_tag="Acear_1640" /note="Flagellar hook-length control protein FliK; Region: Flg_hook; cl14669" /db_xref="CDD:196811" gene complement(1737579..1738118) /locus_tag="Acear_1641" /db_xref="GeneID:9513698" CDS complement(1737579..1738118) /locus_tag="Acear_1641" /note="InterPro IPR006668; KEGG: bld:BLi01846 YlxF; PFAM: MgtE intracellular region; SPTR: Q65JM3 protein kinase PKN/PRK1, effector,Flagellar motor switch protein FliG-like; PFAM: MgtE intracellular N domain" /codon_start=1 /transl_table=11 /product="MgtE intracellular region" /protein_id="YP_003828211.1" /db_xref="GI:302392391" /db_xref="GeneID:9513698" /translation="MKKFFLSILAIILSIIVVVIGLQMFGIMDVKGIAINQMKKIPVA KQMIAGQEIQTELEAELEQEEEKVAELTQENQELKNRLEGRNSELKDKQSTIETLEEE LANLETQQQERKNRIKKLVDMYQAMDAANVAQVIPELKDSLAIRILQELEAEHAGDIL SQLPPEEAARYSDILSGES" misc_feature complement(1737588..>1737779) /locus_tag="Acear_1641" /note="MgtE intracellular N domain; Region: MgtE_N; cl15244" /db_xref="CDD:197452" gene complement(1738139..1738603) /locus_tag="Acear_1642" /db_xref="GeneID:9513699" CDS complement(1738139..1738603) /locus_tag="Acear_1642" /note="InterPro IPR012823:IPR000809; KEGG: nth:Nther_1395 flagellar export protein FliJ; PFAM: flagellar FliJ protein; SPTR: B2A347 Flagellar export protein FliJ; TIGRFAM: flagellar export protein FliJ; PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ" /codon_start=1 /transl_table=11 /product="flagellar export protein FliJ" /protein_id="YP_003828212.1" /db_xref="GI:302392392" /db_xref="GeneID:9513699" /translation="MQQFDFKMEKVLDYRQQEEDMIQQELTKIQSVLKKEKEKLNKLV TNKCEIQTKLKEKESNGINLQQAVMYRDHLEVLAAEIEEQKQVVAQIKEEFEKCRSRL LDKTKECKMLNKLKERQFANYKEEFLKEEQKNIDELATNNFIRQADNNQAVI" misc_feature complement(1738169..1738594) /locus_tag="Acear_1642" /note="Flagellar FliJ protein; Region: FliJ; cl09161" /db_xref="CDD:195810" misc_feature complement(1738169..1738588) /locus_tag="Acear_1642" /note="flagellar export protein FliJ; Region: flagell_FliJ; TIGR02473" /db_xref="CDD:131526" gene complement(1738617..1739936) /locus_tag="Acear_1643" /db_xref="GeneID:9513700" CDS complement(1738617..1739936) /locus_tag="Acear_1643" /EC_number="3.6.3.14" /EC_number="3.6.3.15" /note="COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterProIPR005714:IPR013380:IPR020005:IPR004100:IPR 000194:IPR003593:IPR020003; KEGG: hmo:HM1_2224 flagellar protein export ATPase FliI, PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; PRIAM: H(+)-transporting two-sector ATPase; SMART: AAA ATPase; SPTR: B0THA5 Flagellar protein export ATPase flii, TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; flagellar protein export ATPase FliI" /codon_start=1 /transl_table=11 /product="type III secretion system ATPase, FliI/YscN" /protein_id="YP_003828213.1" /db_xref="GI:302392393" /db_xref="GeneID:9513700" /translation="MSDKLLDGNKLAKELESWSLVNNFGKISQVVGLIIESEGPDVTL GEICLIKSDSNSEPIQAEVVGFRDNKVLLMPLGEMGGIGPGCKVEATNEPLKVKVGDE LLGHVLDGLGNPLTDLDLDQLHKEYSVNNPPPNPLVRQRITEPLSVGIRSIDGLLTCG RGQRLGIFAGSGVGKSTLLGMIARNTAADVNVIGLIGERGREVREFIEDDLGTEGLKR SVVVVATSDQPALVRLKGALVTTTIAEYFRDQGQDVMLMMDSITRFARAQREVGLAVG EPPATRGYTPSVFAMLPKLLERAGNNEVGTITGLYNVLVEGDDMNEPIADAVRGIVDG HITLSRDLATQNHYPAVDVLESVSRVMDDVVTEEHQTAAQQLREVLATYEESKDLVNI GAYEEGNNPELDYALSKLDEVNDFLQQGVEEKSDFETTLQQLKNIFK" misc_feature complement(1738623..1739864) /locus_tag="Acear_1643" /note="flagellar protein export ATPase FliI; Region: FliI_clade2; TIGR03497" /db_xref="CDD:132536" misc_feature complement(1739661..1739858) /locus_tag="Acear_1643" /note="ATP synthase alpha/beta family, beta-barrel domain; Region: ATP-synt_ab_N; pfam02874" /db_xref="CDD:145823" misc_feature complement(1738680..1739657) /locus_tag="Acear_1643" /note="Flagellum-specific ATPase/type III secretory pathway virulence-related protein. This group of ATPases are responsible for the export of flagellum and virulence-related proteins. The bacterial flagellar motor is similar to the F0F1-ATPase, in that they...; Region: ATPase_flagellum-secretory_path_III; cd01136" /db_xref="CDD:30002" misc_feature complement(1739409..1739429) /locus_tag="Acear_1643" /note="Walker A motif/ATP binding site; other site" /db_xref="CDD:30002" misc_feature complement(1739160..1739174) /locus_tag="Acear_1643" /note="Walker B motif; other site" /db_xref="CDD:30002" gene complement(1739926..1740705) /locus_tag="Acear_1644" /db_xref="GeneID:9513701" CDS complement(1739926..1740705) /locus_tag="Acear_1644" /note="COGs: COG1317 Flagellar biosynthesis/type III secretory pathway protein; InterPro IPR002842:IPR018035; KEGG: lbf:LBF_2847 flagellar assembly protein H; PFAM: Flagellar assembly protein FliH/type III secretion system HrpE; H+transporting two-sector ATPase E subunit; SPTR: B0SP03 Flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH" /codon_start=1 /transl_table=11 /product="Flagellar assembly protein FliH/type III secretion system HrpE" /protein_id="YP_003828214.1" /db_xref="GI:302392394" /db_xref="GeneID:9513701" /translation="MSKVIKHFQVNKNNSVQLFKDEDEDTSKQNEKQPPEAENEIKQP EEELKQAKDEIVIEAENEAEEIIQEANKKAEEIKNNAKSEAEKIKEEAYQEGLEQGYE EGREEILAQGEEEISQLLDRLKTEIDNLDHQIEEKIFCLKDDVLELSIAISEKIIKQE LSLDRSIIKNLIQESLELLDGEKRVTIRVNFSDLELLKEEKDRLLKLDSNLEEIKLVS DKDIQPGGCILETEFGGLDATITSQLEEISDRLLGGEKDER" misc_feature complement(1739965..1740366) /locus_tag="Acear_1644" /note="Flagellar assembly protein FliH; Region: FliH; pfam02108" /db_xref="CDD:111047" gene complement(1740698..1741708) /locus_tag="Acear_1645" /db_xref="GeneID:9513702" CDS complement(1740698..1741708) /locus_tag="Acear_1645" /note="COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090:IPR011002; KEGG: nth:Nther_1392 flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; SPTR: A1HN41 Flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliG" /protein_id="YP_003828215.1" /db_xref="GI:302392395" /db_xref="GeneID:9513702" /translation="MAQLDNLSGKQKAAILLVSLGPDLSAEVMKHFDEDEIEELTLEI ANLNKVPAETKDEVLDEFHQMCVAYDYLNQGGIGYAREVLTKALGERQAENVIDRLTS SLQVRPFDQLRKADPTQLLNFIQGEHPQTIALIMAYLNPNQASTILSALSPQQQTEVA KRIATMDRTSPEVIKEVERVLEQKLSSMMTNEYSTAGGLESIVDIINTVDRGTEKTIL EDLDEDDPELAEDIRKRLFVFEDITLLTDQAVQLVLRDIDMEDLALALKTVDDEVSDK IFNNLSNRAADMLKEDMEFMGPVRVRDVEEAQQSIVNEIRRLEEMGEIVIDRGGEDEV IV" misc_feature complement(1740701..1741708) /locus_tag="Acear_1645" /note="flagellar motor switch protein G; Validated; Region: fliG; PRK05686" /db_xref="CDD:180201" misc_feature complement(1740731..1741015) /locus_tag="Acear_1645" /note="FliG C-terminal domain; Region: FliG_C; pfam01706" /db_xref="CDD:190075" gene complement(1741728..1743302) /locus_tag="Acear_1646" /db_xref="GeneID:9513703" CDS complement(1741728..1743302) /locus_tag="Acear_1646" /note="COGs: COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; InterPro IPR000067:IPR006182:IPR011546:IPR013556; KEGG: hor:Hore_16890 flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; peptidase M41 FtsH extracellular; Flagellar M-ring domain protein; SPTR: B8CYR9 Flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: Flagellar M-ring protein C-terminal; Secretory protein of YscJ/FliF family; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)" /codon_start=1 /transl_table=11 /product="flagellar M-ring protein FliF" /protein_id="YP_003828216.1" /db_xref="GI:302392396" /db_xref="GeneID:9513703" /translation="MIENLKQMIEQVKELWNNLDTKAKVIISSSAIVSIIVLLLVTNW ASQPNYVTLFNDLTMKDAGAITKQLDEKQIDYKLGADGTKISVPAQKVHQVRLDLASK GLPQKGAVGFEIFDKNQLGSTDFEQQVNFYRALSGELARSIMHLQNVKFAKVQISAPR ESLYLDKKKVVKASVMLKMKEYAELDLKQVEGITNLVASSVEDLKPENVTVVDDRGNL LTAELNKEDKFNNTDFSPKLLELENDFESNMESELNTMLSKVLGPDNVVVRVNAKLNF DRRQMESRTYEPVNDDQGVVRSEQSTEVSYSGQGDTPSGVPGTESNIPGYEGGEEQSS NYDKEETTTNYEINEKIETYTQVPGDVEKMSVAVMVDKELSPAQTESIRQSVESAVGY SAERGDQITITNFEFDRSLEKKMTAEMEAQKSAEQRRWIIIGIITILVLIIGFLILRR LRSGSGRAGDGGQGAEELDVVVDDQGQTETAATEEKELSPEERKRKEMKEEISDLVEQ QPEEVARLLKTWLAEE" misc_feature complement(1741731..1743302) /locus_tag="Acear_1646" /note="flagellar MS-ring protein; Reviewed; Region: fliF; PRK06007" /db_xref="CDD:180348" misc_feature complement(1742634..1743173) /locus_tag="Acear_1646" /note="Secretory protein of YscJ/FliF family; Region: YscJ_FliF; cl01907" /db_xref="CDD:186494" misc_feature complement(1742082..1742534) /locus_tag="Acear_1646" /note="Flagellar M-ring protein C-terminal; Region: YscJ_FliF_C; pfam08345" /db_xref="CDD:192009" gene complement(1743332..1743628) /locus_tag="Acear_1647" /db_xref="GeneID:9513704" CDS complement(1743332..1743628) /locus_tag="Acear_1647" /note="COGs: COG1677 Flagellar hook-basal body protein; InterPro IPR001624; KEGG: nth:Nther_1390 flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; SPTR: B2A342 Flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE" /codon_start=1 /transl_table=11 /product="flagellar hook-basal body complex subunit FliE" /protein_id="YP_003828217.1" /db_xref="GI:302392397" /db_xref="GeneID:9513704" /translation="MKVDQLQTDKLLNLQKVNQNNKVEGKDSFKKVFNNALHKVNNLQ KQQDVMAKKLATGEVDNIHQVMVTATKAKLALDLTLEIRNKAVESYKEIMRMQV" misc_feature complement(1743335..>1743547) /locus_tag="Acear_1647" /note="Flagellar hook-basal body complex protein FliE; Region: FliE; cl09139" /db_xref="CDD:195803" gene complement(1743643..1744080) /locus_tag="Acear_1648" /db_xref="GeneID:9513705" CDS complement(1743643..1744080) /locus_tag="Acear_1648" /note="COGs: COG1558 Flagellar basal body rod protein; InterPro IPR006299:IPR001444:IPR010930:IPR019776; KEGG: hor:Hore_16910 flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: B8CYS1 Flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgC" /protein_id="YP_003828218.1" /db_xref="GI:302392398" /db_xref="GeneID:9513705" /translation="MGLFSGMNVSSSGMTAQRLRMDLISNNIANINTTRTDDGGPYKK KSPVFKAKNDQGFSLPNSDAQSNQVGQGVEVSSIKESSKPPKLVYNPQHPDANEEGYV EMPNIDIASEMVDMVSASRAYEANVTALNTSKQMAKSALKIGK" misc_feature complement(1743646..1744080) /locus_tag="Acear_1648" /note="flagellar basal body rod protein FlgC; Reviewed; Region: flgC; PRK05681" /db_xref="CDD:180197" misc_feature complement(1743976..1744062) /locus_tag="Acear_1648" /note="Flagella basal body rod protein; Region: Flg_bb_rod; cl15245" /db_xref="CDD:197453" misc_feature complement(1743652..1743768) /locus_tag="Acear_1648" /note="Domain of unknown function (DUF1078); Region: DUF1078; pfam06429" /db_xref="CDD:191521" gene complement(1744107..1744514) /locus_tag="Acear_1649" /db_xref="GeneID:9513706" CDS complement(1744107..1744514) /locus_tag="Acear_1649" /note="COGs: COG1815 Flagellar basal body protein; InterPro IPR006300:IPR001444:IPR019776; KEGG: hmo:HM1_2218 flagellar basal-body rod protein FlgB, PFAM: flagellar basal body rod protein; SPTR: A1HN45 Flagellar basal-body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgB" /protein_id="YP_003828219.1" /db_xref="GI:302392399" /db_xref="GeneID:9513706" /translation="MDNITGNQSISVLTKALDGLQQRQEAISNNIANVDTPDYKRKDV NFKSELKTALNNDSTGLTATHKNHFSTNSNLDQLSLRIKTDSNTKMRSDQNNVDIDRE MSILAKNGLEYQAVTRMLSMEFDQLSSVINKVK" misc_feature complement(1744119..1744496) /locus_tag="Acear_1649" /note="flagellar basal-body rod protein FlgB; Region: FlgB; TIGR01396" /db_xref="CDD:162337" misc_feature complement(1744152..1744472) /locus_tag="Acear_1649" /note="Flagella basal body rod protein; Region: Flg_bb_rod; cl15245" /db_xref="CDD:197453" gene complement(1744865..1745659) /locus_tag="Acear_1650" /db_xref="GeneID:9513707" CDS complement(1744865..1745659) /locus_tag="Acear_1650" /note="COGs: COG4465 Pleiotropic transcriptional repressor; InterPro IPR014154:IPR010312:IPR013198; KEGG: hor:Hore_07580 GTP-sensing transcriptional pleiotropic repressor CodY; PFAM: GTP-sensing transcriptional pleiotropic repressor CodY; Helix-turn-helix CodY domain protein; SPTR: B8CW46 GTP-sensing transcriptional pleiotropic repressor CodY; TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY; PFAM: CodY helix-turn-helix domain; CodY GAF-like domain; TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY" /codon_start=1 /transl_table=11 /product="GTP-sensing pleiotropic transcriptional repressor CodY" /protein_id="YP_003828220.1" /db_xref="GI:302392400" /db_xref="GeneID:9513707" /translation="MEEVLKSLLKETRKINRLLKKSAVNSVDFTEIAKVVSGSIESNV YIVDKSGEILGYELINKFECELMINEVVNQGYFPEDYNDWVLGITETQANFEQKDANC VFKKDEECMFTQKITTIIPINGGGERLGTLIVARFDGKFNADDLILAEYGATVVGMEI LRAQSEKIEKEARKKAAVHVALETLSYSELEAIEHIFEELEGKEGLLVASKIADRVGI TRSVIVNALRKFESAGVIETRSLGMKGTYIKILNERLLEELEKIKA" misc_feature complement(1744877..1745644) /locus_tag="Acear_1650" /note="transcriptional repressor CodY; Validated; Region: PRK04158" /db_xref="CDD:179755" misc_feature complement(1745165..1745641) /locus_tag="Acear_1650" /note="CodY GAF-like domain; Region: CodY; pfam06018" /db_xref="CDD:147918" misc_feature complement(1744871..1745050) /locus_tag="Acear_1650" /note="CodY helix-turn-helix domain; Region: HTH_CodY; pfam08222" /db_xref="CDD:116808" gene complement(1745792..1747195) /locus_tag="Acear_1651" /db_xref="GeneID:9513708" CDS complement(1745792..1747195) /locus_tag="Acear_1651" /note="COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; InterPro IPR004491:IPR013093:IPR019489:IPR003593; KEGG: hor:Hore_07570 heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA; Clp ATPase-like; SMART: AAA ATPase; SPTR: B8CW45 Heat shock protein HslVU, ATPase subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: heat shock protein HslVU, ATPase subunit HslU" /codon_start=1 /transl_table=11 /product="heat shock protein HslVU, ATPase subunit HslU" /protein_id="YP_003828221.1" /db_xref="GI:302392401" /db_xref="GeneID:9513708" /translation="MEELTPRKIVEQLDKYIVGQEEAKKSVAVALRNRYRRRQLSTEL KEEIMPKNILMIGPTGVGKTEIARRLAKLAQAPFAKVEVTKFTEVGYVGRDVESMIRD LVQTAIRMVKRERMEEVEDKAEKLAEDRILDKLLPLPENENNSNPLGALFGNFGNEEN NSSEVEDQEHLKRLKKRREELREKLRAGELEDRVIEIEVEENNSQMIEVFSGSGVEEM GVNFQDVLGGMFPNQTKERKASIKEAREILKQQEAQKLIDMDEVSSEAISRVEESGII FLDEIDKVAGDNASSSGPEVSREGVQRDILPIVEGSTVMTKHGPVKTDHIFFIAAGAF HVSKPTDLIPELQGRFPIRVELSSLTEENFKAILTEPENALTKQYKALLTTEDLEIEF TERAIEELASIAFQINEETENIGARRLHTVLEKLLEDISFEAPEMSEDSIEIDAEYVQ DKLSDIVEDKDLSRYIL" misc_feature complement(1745795..1747195) /locus_tag="Acear_1651" /note="ATP-dependent protease ATP-binding subunit HslU; Provisional; Region: hslU; PRK05201" /db_xref="CDD:179962" misc_feature complement(<1746881..1747144) /locus_tag="Acear_1651" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(1747004..1747027) /locus_tag="Acear_1651" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(1747001..1747024) /locus_tag="Acear_1651" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(1746137..1746490) /locus_tag="Acear_1651" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" gene complement(1747216..1747743) /locus_tag="Acear_1652" /db_xref="GeneID:9513709" CDS complement(1747216..1747743) /locus_tag="Acear_1652" /note="COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; InterPro IPR001353; KEGG: drm:Dred_1981 ATP-dependent protease peptidase subunit; PFAM: 20S proteasome A and B subunits; SPTR: A4J5Z6 ATP-dependent protease hslV; PFAM: Proteasome subunit" /codon_start=1 /transl_table=11 /product="ATP dependent peptidase CodWX, CodW component" /protein_id="YP_003828222.1" /db_xref="GI:302392402" /db_xref="GeneID:9513709" /translation="MFEATTVVAVKQGKKVAIAGDGQVTMKHTVMKHKAKKVRRLYNG EVLAGFAGSAADGFTLFEKFEAKIEEFQGNLQRAAVELAKEWRTDKMLRKLEALLIVA NDEHLLVISGSGDVIEPDDDVTAIGSGGPYALAATRALLEYSELEPADIAKQALKIAS DICIYTNDNITVEEI" misc_feature complement(1747219..1747731) /locus_tag="Acear_1652" /note="Protease HslV and the ATPase/chaperone HslU are part of an ATP-dependent proteolytic system that is the prokaryotic homolog of the proteasome. HslV is a dimer of hexamers (a dodecamer) that forms a central proteolytic chamber with active sites on the...; Region: protease_HslV; cd01913" /db_xref="CDD:48442" misc_feature complement(order(1747360..1747362,1747633..1747635, 1747675..1747677,1747681..1747683,1747729..1747731)) /locus_tag="Acear_1652" /note="active site" /db_xref="CDD:48442" misc_feature complement(order(1747252..1747254,1747258..1747263, 1747270..1747272,1747282..1747284,1747315..1747317, 1747339..1747341,1747348..1747353,1747390..1747392, 1747402..1747404,1747483..1747485,1747654..1747662)) /locus_tag="Acear_1652" /note="HslU subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:48442" gene complement(1747845..1749938) /locus_tag="Acear_1653" /db_xref="GeneID:9513710" CDS complement(1747845..1749938) /locus_tag="Acear_1653" /EC_number="5.99.1.2" /note="COGs: COG0550 Topoisomerase IA; InterProIPR000380:IPR005733:IPR013824:IPR013826:IPR 006171:IPR013497:IPR013498:IPR006154:IPR003601:IPR003602; KEGG: hor:Hore_07540 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; SPTR: B8CW42 DNA topoisomerase; TIGRFAM: DNA topoisomerase I; PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial" /codon_start=1 /transl_table=11 /product="DNA topoisomerase I" /protein_id="YP_003828223.1" /db_xref="GI:302392403" /db_xref="GeneID:9513710" /translation="MAENLVIVESPAKAKTINKFLGKGFNVEASMGHVIDLPKSQLGI NIEENFEPKYITIRGKGDVLKKLRKAVKKSDNVFLATDPDREGEAISWHLSRALKLDD ESECRIEFNEITENAIQQAIEAPRSIDKDRVDAQQARRLLDRLVGYKLSPLLWKKVRR GLSAGRVQSVAVKIICQREEEIEEFEPDEYWSLEADLQTDSKQQFEAKLHRIDGDKFK LNNKEETDKVIVEAEKNNFVIEKIKERKRRNNPAPPLTTSSLQQRAASSLNFTAKKTM FIAQQLYEGLDLGSEGTVGLITYIRTDSTRISKEAQQDTRKFIEDNFGPRYRPKDTKK YKVKSGAQDAHEAIRPTSVFRTPKKVKSYLNNDQYRLYKLIWEKFVASQMTPAIYKTL SVDIKAGKYLFRSTGSRTLFKGYLAVDTFKNRKQDKDLPEDLEEGTEVELLEFKPEQH FTKPPARYTEAKLVKTLEKKGIGRPSTYAPTVAKIQDRGYVNKEGKRFVPTELGKTVN HLLNKHFPDVTDIKFTANLEQQLDDVEVGKEDWRELLKEFYFPFEERLNSAYENMEEV ELEKEVTDEVCEKCGKNMIVKHGKYGKFLACPGFPDCKNTKPYLIKMGVDCIECEDGE VVQRKSKKGRTFYGCSNYPDCEFMIWYKPVQEYCPECGTFLMEKTTKKRGTEYLCADE DCDFKTTPEELESEE" misc_feature complement(1747977..1749938) /locus_tag="Acear_1653" /note="DNA topoisomerase I; Validated; Region: PRK05582" /db_xref="CDD:180146" misc_feature complement(1749564..1749929) /locus_tag="Acear_1653" /note="TOPRIM_TopoIA_TopoI: The topoisomerase-primase (TORPIM) domain found in members of the type IA family of DNA topoisomerases (Topo IA) similar to Escherichia coli DNA topoisomerase I. Type IA DNA topoisomerases remove (relax) negative supercoils in...; Region: TOPRIM_TopoIA_TopoI; cd03363" /db_xref="CDD:173783" misc_feature complement(order(1749681..1749683,1749687..1749689, 1749693..1749695,1749900..1749902,1749909..1749914)) /locus_tag="Acear_1653" /note="active site" /db_xref="CDD:173783" misc_feature complement(order(1749651..1749656,1749660..1749665, 1749684..1749686,1749690..1749692,1749891..1749893)) /locus_tag="Acear_1653" /note="interdomain interaction site; other site" /db_xref="CDD:173783" misc_feature complement(order(1749687..1749689,1749693..1749695)) /locus_tag="Acear_1653" /note="putative metal-binding site [ion binding]; other site" /db_xref="CDD:173783" misc_feature complement(1749684..1749686) /locus_tag="Acear_1653" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:173783" misc_feature complement(1748277..1749548) /locus_tag="Acear_1653" /note="DNA Topoisomerase, subtype IA; DNA-binding, ATP-binding and catalytic domain of bacterial DNA topoisomerases I and III, and eukaryotic DNA topoisomerase III and eubacterial and archael reverse gyrases. Topoisomerases clevage single or double stranded...; Region: TOP1Ac; cd00186" /db_xref="CDD:73184" misc_feature complement(order(1749393..1749455,1749468..1749548)) /locus_tag="Acear_1653" /note="domain I; other site" /db_xref="CDD:73184" misc_feature complement(order(1748475..1748480,1748490..1748492, 1748496..1748501,1748508..1748513,1749036..1749038, 1749087..1749089,1749099..1749101,1749486..1749488, 1749498..1749500,1749510..1749512,1749519..1749524)) /locus_tag="Acear_1653" /note="DNA binding groove [nucleotide binding]" /db_xref="CDD:73184" misc_feature complement(order(1748403..1748405,1749408..1749410, 1749420..1749422)) /locus_tag="Acear_1653" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:73184" misc_feature complement(order(1748580..1748612,1748682..1748738, 1748742..1748786,1749189..1749230,1749354..1749380)) /locus_tag="Acear_1653" /note="domain II; other site" /db_xref="CDD:73184" misc_feature complement(order(1748787..1748849,1748883..1748909, 1748970..1749056,1749084..1749164,1749168..1749188)) /locus_tag="Acear_1653" /note="domain III; other site" /db_xref="CDD:73184" misc_feature complement(order(1748445..1748447,1748511..1748513, 1748517..1748519,1748808..1748810,1748820..1748822, 1748829..1748831,1748904..1748906,1749135..1749143, 1749153..1749155)) /locus_tag="Acear_1653" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:73184" misc_feature complement(order(1748904..1748906,1749036..1749038, 1749042..1749044)) /locus_tag="Acear_1653" /note="catalytic site [active]" /db_xref="CDD:73184" misc_feature complement(order(1748277..1748387,1748403..1748447, 1748457..1748579)) /locus_tag="Acear_1653" /note="domain IV; other site" /db_xref="CDD:73184" misc_feature complement(1748115..1748210) /locus_tag="Acear_1653" /note="Topoisomerase DNA binding C4 zinc finger; Region: zf-C4_Topoisom; cl11977" /db_xref="CDD:143760" misc_feature complement(1747980..1748099) /locus_tag="Acear_1653" /note="Topoisomerase DNA binding C4 zinc finger; Region: zf-C4_Topoisom; cl11977" /db_xref="CDD:143760" gene complement(1749972..1750466) /locus_tag="Acear_1654" /db_xref="GeneID:9513711" CDS complement(1749972..1750466) /locus_tag="Acear_1654" /note="KEGG: hor:Hore_07530 hypothetical protein; SPTR: B8CW41 Putative uncharacterized protein; PFAM: protein of unknown function (DUF494)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828224.1" /db_xref="GI:302392404" /db_xref="GeneID:9513711" /translation="MNENVIEIVSYLVKQIMHNEDVIENEEQLVENLVSQGYEIADID MAFELIFSSNIYDEENEVEANNHKFELTKSQRILDVRERFKLSIPVQGALLRLTNLGL ISDDELEEVLEKTVHIKKKELGLKSLWNLLRKVIDEPTRLSVIIENSPEFESINSEHK QYIN" misc_feature complement(<1750083..1750454) /locus_tag="Acear_1654" /note="Protein of unknown function (DUF494); Region: DUF494; cl01103" /db_xref="CDD:186336" gene complement(1750612..1751715) /locus_tag="Acear_1655" /db_xref="GeneID:9513712" CDS complement(1750612..1751715) /locus_tag="Acear_1655" /note="COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488:IPR010994; KEGG: hor:Hore_07520 DNA protecting protein DprA; PFAM: SMF family protein; SPTR: B8CW40 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA" /codon_start=1 /transl_table=11 /product="DNA protecting protein DprA" /protein_id="YP_003828225.1" /db_xref="GI:302392405" /db_xref="GeneID:9513712" /translation="MDTRKYWLGLINLQGLGSRIIKNLLDYFGDAESIWKASQKELCK VRLIGTKRSQHIIKDREEIDLDYKVKRLNELGVEYLTLDDEEYPFLLENIYDPPPVIF YKGELTSRDLISLSIVGSRKCTAYGRKVANRLAASLADQGFTIISGLARGIDTAAHQG ALKEGRTVGVLGSGIDVIYPPENDELVTEIEESGAVISSFPLGTAPHGNNFPKRNRII SGLSLGTIVVEAAKKSGSLITANLALQQGREVFAIPGDITKDQSVGTNDLIQTGAKLV QSIDDILIELPLDDWWERIDKTDQELKEEEKTDLSLQEAKVYDKIESVPQEFDKILAT VDFSASQLNSILLKLEIKGLITQLAGNRFKRSS" misc_feature complement(1750621..1751715) /locus_tag="Acear_1655" /note="Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]; Region: Smf; COG0758" /db_xref="CDD:31101" misc_feature complement(1750882..1751505) /locus_tag="Acear_1655" /note="DNA recombination-mediator protein A; Region: DNA_processg_A; cl00695" /db_xref="CDD:153941" gene complement(1751785..1753314) /locus_tag="Acear_1656" /db_xref="GeneID:9513713" CDS complement(1751785..1753314) /locus_tag="Acear_1656" /note="COGs: COG0606 ATPase with chaperone activity; InterProIPR001208:IPR004482:IPR000523:IPR003593:IPR 020568; KEGG: hor:Hore_07410 Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; SPTR: B8CW29 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein" /codon_start=1 /transl_table=11 /product="Mg chelatase, subunit ChlI" /protein_id="YP_003828226.1" /db_xref="GI:302392406" /db_xref="GeneID:9513713" /translation="MISKVISSAVLGIEAYLVDVEIDLAQGLPSFNLVGLPNTVVKES RERVRAAIKNSGFNFPVKRITVNLAPADIKKEGAIYDLPLAIGILAAQEIVDAAKLSE YVLVGELSLNGEVREINGALPMALNVKEEGKEGIILPEANANEAAVVDGIDVIPVTSL EETIEFLNDEDLNFEVDQDYQLDLNPEYKIDFAEVKGQQAAKRALEVAAAGGHNIIMI GPPGSGKTMLAKRFPTILPDLTLKEAVELTKIYSIVGLLSENESLINRRPFRDPHHTT SNAGMIGGGRVPQPGEVSLAHHGVLFLDELPEFNRNVLEVLRQPLEEREVTISRSLTT LTYPANIMLIAAMNPCPCGFHGDSKQDCSCSHRQIERYRNKVSGPLLDRIDIHIEVPR LEAEVISSSPTGETSAEIRQRVNQARKIQYDRFHKQSIICNAEMNGKLLEEYCILTSD SKELLQQAIERLNLSARAYDRILKLGRTIADLDQKTKIEVDHIGEAIQYRDLDRKLFA S" misc_feature complement(1751800..1753275) /locus_tag="Acear_1656" /note="Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]; Region: COG0606" /db_xref="CDD:30951" misc_feature complement(1752121..1752744) /locus_tag="Acear_1656" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" gene complement(1753342..1753704) /locus_tag="Acear_1657" /db_xref="GeneID:9513714" CDS complement(1753342..1753704) /locus_tag="Acear_1657" /note="COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR003509:IPR011335; KEGG: csc:Csac_2148 hypothetical protein; PFAM: protein of unknown function UPF0102; SPTR: A4XLE5 UPF0102 protein Csac_2148; PFAM: Uncharacterised protein family UPF0102; TIGRFAM: conserved hypothetical protein TIGR00252" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828227.1" /db_xref="GI:302392407" /db_xref="GeneID:9513714" /translation="MVNKKKLGQLGEELAAEYLKELGYSIINRNYSCRIGELDIIAAK DNYLVFVEVKTKQNFKFGTPREEVNYHKQQKLQQVAQYYISQHPKKEANYRFDVIGIL YQSEDDYQVSHIKNAFLT" misc_feature complement(1753351..1753704) /locus_tag="Acear_1657" /note="Uncharacterised protein family UPF0102; Region: UPF0102; cl00516" /db_xref="CDD:186051" gene 1753871..1754437 /locus_tag="Acear_1658" /db_xref="GeneID:9513715" CDS 1753871..1754437 /locus_tag="Acear_1658" /note="InterPro IPR009097; KEGG: hor:Hore_02930 hypothetical protein; SPTR: B8D1H7 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828228.1" /db_xref="GI:302392408" /db_xref="GeneID:9513715" /translation="MVEPAELDKEVFIVLTLDYDDLTPALKIQESIAEYYNLYEDGQY PELHITLDRINKDSIQQAKKILEKIAKDTQPVPIAISNFECFKLSNSLVLKVDETQAL VKLANKIHNQLSTNGLSTIDDYVDWNFHITLVNNHFTDNKISDFEFNTLCSVLDGLES PISTTAKSIEIWQPTLNPEEKQVASFKL" misc_feature 1753934..>1754206 /locus_tag="Acear_1658" /note="hypothetical protein; Provisional; Region: PRK13679" /db_xref="CDD:184236" gene 1754733..1755056 /locus_tag="Acear_1659" /db_xref="GeneID:9513716" CDS 1754733..1755056 /locus_tag="Acear_1659" /note="COGs: COG0393 conserved hypothetical protein; InterPro IPR002765; KEGG: afu:AF0869 hypothetical protein; PFAM: protein of unknown function DUF74; SPTR: O29392 UPF0145 protein AF_0869; PFAM: Domain of unknown function (DUF74)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828229.1" /db_xref="GI:302392409" /db_xref="GeneID:9513716" /translation="MIITTTDKIAYRKIKETLGVVRGNTIRARHIGNDILAMLRNLIG GEVKEYTGMISEAREEAFERMNQEAEELEADAILNVRFTTSQVMGGAAEILAYGTAVK LERRE" misc_feature 1754742..1755044 /locus_tag="Acear_1659" /note="Domain of unknown function (DUF74); Region: DUF74; cl00426" /db_xref="CDD:193812" gene complement(1755094..1755330) /locus_tag="Acear_1660" /db_xref="GeneID:9513717" CDS complement(1755094..1755330) /locus_tag="Acear_1660" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828230.1" /db_xref="GI:302392410" /db_xref="GeneID:9513717" /translation="MKLKQGDILSGMVLEVKAKTAVINFGHYALEARVLTELEVGEKV KVQVKGKYKNTVVLKVLNRHYDGEIGDNSIDVRV" gene complement(1755337..1756284) /locus_tag="Acear_1661" /db_xref="GeneID:9513718" CDS complement(1755337..1756284) /locus_tag="Acear_1661" /EC_number="3.1.26.4" /note="COGs: COG0164 Ribonuclease HII; InterPro IPR001352:IPR012337; KEGG: hor:Hore_07370 ribonuclease H; PFAM: ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: B8CW25 Ribonuclease; PFAM: Ribonuclease HII" /codon_start=1 /transl_table=11 /product="Ribonuclease H" /protein_id="YP_003828231.1" /db_xref="GI:302392411" /db_xref="GeneID:9513718" /translation="MQVSEMTIKELKAELEKMELTAVSEELLAELTADSRKGVQQLAK RYQRKKQRVAQKKEKFREMKQFEDDLANRGYQLIGGVDEAGRGPLAGPVAAAVVILPE DIWMPGLNDSKQLSEAKREEFFAKLQEEAVDIGVGLVDSDRIDEVNIRNANYQAMREA ISNLEQTPDYLLVDGEEIPEIGIEQRRLVDGDQRSVSIAAASIIAKVTRDRMLVEYDQ EYPEYNFVQHKGYGTADHIAALEEHGPCPIHRYSFSKVREAALGEDYYLFEEGLKQAD SIDELESIAASVKECVDLLSEFELKELRNIFSQRRQELR" misc_feature complement(1755514..1756047) /locus_tag="Acear_1661" /note="bacterial Ribonuclease HII-like; Region: RNase_HII_bacteria_HII_like; cd07182" /db_xref="CDD:187695" misc_feature complement(order(1755667..1755669,1755724..1755726, 1755763..1755765,1755823..1755825,1755832..1755840, 1756030..1756041)) /locus_tag="Acear_1661" /note="RNA/DNA hybrid binding site [nucleotide binding]; other site" /db_xref="CDD:187695" misc_feature complement(order(1755709..1755711,1755763..1755765, 1756036..1756041)) /locus_tag="Acear_1661" /note="active site" /db_xref="CDD:187695" gene complement(1756902..1757417) /locus_tag="Acear_1662" /db_xref="GeneID:9513719" CDS complement(1756902..1757417) /locus_tag="Acear_1662" /EC_number="3.4.21.89" /note="COGs: COG0681 Signal peptidase I; InterProIPR000223:IPR011056:IPR019759:IPR019756:IPR 019757:IPR019758:IPR015927; KEGG: dth:DICTH_1422 signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: C1TKM4 Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type" /codon_start=1 /transl_table=11 /product="signal peptidase I" /protein_id="YP_003828232.1" /db_xref="GI:302392412" /db_xref="GeneID:9513719" /translation="MGISKADFKEYLEAVVIAIILSFLIITFIVQAFFIPSGSMQPTL KPGDRIFVNKFIYHFQAPQRFDIIVFKYPVDPHKKFIKRVIGLPGDTVKILEGTVYVN GEPLKEDYTLNQGYSDYHKIKVPPNNYFVLGDNRNNSEDSRFWGFVPRENIVGKALFR FWPITRIGTIN" misc_feature complement(1756929..1757387) /locus_tag="Acear_1662" /note="signal peptidase I, bacterial type; Region: sigpep_I_bact; TIGR02227" /db_xref="CDD:188205" misc_feature complement(1756947..1757327) /locus_tag="Acear_1662" /note="The S26 Type I signal peptidase (SPase; LepB; leader peptidase B; leader peptidase I; EC 3.4.21.89) family members are essential membrane-bound serine proteases that function to cleave the amino-terminal signal peptide extension from proteins that are...; Region: S26_SPase_I; cd06530" /db_xref="CDD:119398" misc_feature complement(order(1757172..1757174,1757301..1757303)) /locus_tag="Acear_1662" /note="Catalytic site [active]" /db_xref="CDD:119398" gene complement(1757499..1757861) /locus_tag="Acear_1663" /db_xref="GeneID:9513720" CDS complement(1757499..1757861) /locus_tag="Acear_1663" /note="COGs: COG0335 Ribosomal protein L19; InterPro IPR001857:IPR018257; KEGG: tye:THEYE_A0821 ribosomal protein L19; PFAM: ribosomal protein L19; SPTR: B5YK97 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L19P" /protein_id="YP_003828233.1" /db_xref="GI:302392413" /db_xref="GeneID:9513720" /translation="MEELLKAVEEDNMKDNIPDFQSGDTVSVHVKVEEGGAERIQLFE GIVIQRKGGGVRETFTVRKISHGVGIERIFPVHSPKIDKIEIVKRGDVNRSKLFYLRQ RRGKNARVKEKREAKEEV" misc_feature complement(1757547..1757855) /locus_tag="Acear_1663" /note="Ribosomal protein L19; Region: Ribosomal_L19; cl00406" /db_xref="CDD:193803" gene complement(1757978..1758556) /locus_tag="Acear_1664" /db_xref="GeneID:9513721" CDS complement(1757978..1758556) /locus_tag="Acear_1664" /note="COGs: COG4752 conserved hypothetical protein; InterPro IPR019230; KEGG: hor:Hore_07340 hypothetical protein; PFAM: protein of unknown function DUF2168; SPTR: B8CW22 Uncharacterized protein conserved in bacteria; PFAM: Uncharacterized protein conserved in bacteria (DUF2168)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828234.1" /db_xref="GI:302392414" /db_xref="GeneID:9513721" /translation="MAVISEIYLSLIHNPVYNKNMEVITTTVTNFDLHDIARVSRTYN LDKYYIVNHLDSQQEFVKKMQNYWSSDFGAEYNSDRQEAFKVVEIKPDLEAVLNEIEA ETGKEPVVIATDARKYENTIGYKDLRDDIATDQRPYLILLGTGWGLTQEVIEEADYIL EPIYGRGDYNHLSVRSAASIILDRLVGEEWWR" misc_feature complement(1757993..1758538) /locus_tag="Acear_1664" /note="SpoU rRNA Methylase family; Region: SpoU_methylase; cl00362" /db_xref="CDD:193788" gene complement(1758560..1759294) /locus_tag="Acear_1665" /db_xref="GeneID:9513722" CDS complement(1758560..1759294) /locus_tag="Acear_1665" /EC_number="2.1.1.31" /note="COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; InterPro IPR002649:IPR016009; KEGG: dth:DICTH_1424 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: B5YFD5 tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase" /codon_start=1 /transl_table=11 /product="tRNA (Guanine37-N(1)-) methyltransferase" /protein_id="YP_003828235.1" /db_xref="GI:302392415" /db_xref="GeneID:9513722" /translation="MLKFHILTIFPEMFTGPLNESILKRAQNEELIKIDITDIRSFAQ NKHNNVDDAPYGGGAGMVMKPEPIFRAVEDVESDESKVIFLSPQGKTFDQKIAKELAE EEHLVLLCGRYEGVDERVRKEVVDEEISIGDYVLTGGELSAMVVIDAVARMIPGVLGT HQSAVEDSFYHGILDYPHYTRPRKYRSLEVPEVLLSGDHQKIADWRKKQALKRTLLRR PDLLEEVELSDEERELLSNIKKELDK" misc_feature complement(1758569..1759291) /locus_tag="Acear_1665" /note="tRNA (Guanine-1)-methyltransferase; Region: tRNA_m1G_MT; cl00407" /db_xref="CDD:185975" gene complement(1759295..1759801) /locus_tag="Acear_1666" /db_xref="GeneID:9513723" CDS complement(1759295..1759801) /locus_tag="Acear_1666" /note="COGs: COG0806 RimM protein required for 16S rRNA processing; InterPro IPR011961:IPR002676:IPR007903:IPR011033; KEGG: hor:Hore_07320 16S rRNA processing protein RimM; PFAM: PRC-barrel domain protein; RimM protein; SPTR: B8CW20 Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM" /codon_start=1 /transl_table=11 /product="16S rRNA processing protein RimM" /protein_id="YP_003828236.1" /db_xref="GI:302392416" /db_xref="GeneID:9513723" /translation="MDEELIDIGKITRHQGNKGEVRVLPLTDYPERFEFLERAILVKD NKKEEVIVEDMRYHKQFIVLKFAEFDDIGTAIEHKDFMVKIPESEAIELPEGHYYLHE IIDLKVVTVDGQNLGKVTDILETGSNDVYVVQSGSKEHLIPGTKEVIKQIDLEAKEMV IKPIKGLI" misc_feature complement(1759298..1759801) /locus_tag="Acear_1666" /note="16S rRNA-processing protein RimM; Provisional; Region: rimM; PRK00122" /db_xref="CDD:178881" misc_feature complement(1759535..1759780) /locus_tag="Acear_1666" /note="RimM N-terminal domain; Region: RimM; pfam01782" /db_xref="CDD:190106" misc_feature complement(1759301..1759519) /locus_tag="Acear_1666" /note="Photosynthetic reaction center (RC) complex, subunit H; RC is an integral membrane protein-pigment complex which catalyzes light-induced reduction of ubiquinone to ubiquinol, generating a transmembrane electrochemical gradient of protons used to...; Region: PRCH; cl09959" /db_xref="CDD:164180" gene complement(1759883..1760113) /locus_tag="Acear_1667" /db_xref="GeneID:9513724" CDS complement(1759883..1760113) /locus_tag="Acear_1667" /note="COGs: COG1837 RNA-binding protein (contains KH domain); InterPro IPR004088:IPR009019; KEGG: hor:Hore_07310 nucleic acid binding protein, containing KH domain; SPTR: B8CW19 Nucleic acid binding protein, containing KH domain" /codon_start=1 /transl_table=11 /product="RNA-binding protein (KH domain)" /protein_id="YP_003828237.1" /db_xref="GI:302392417" /db_xref="GeneID:9513724" /translation="MKELVELIARNIVDNPEEVNVNQVEGSKSVILELQVAEEDMGKV IGKQGRIAKAIRTVVKAAATKEGKRVIVEIIQ" misc_feature complement(1759889..1760113) /locus_tag="Acear_1667" /note="Predicted RNA-binding protein (contains KH domain) [General function prediction only]; Region: COG1837; cl00794" /db_xref="CDD:186191" gene complement(1760143..1760412) /locus_tag="Acear_1668" /db_xref="GeneID:9513725" CDS complement(1760143..1760412) /locus_tag="Acear_1668" /note="COGs: COG0228 Ribosomal protein S16; InterPro IPR000307; KEGG: hor:Hore_07300 ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: B8CW18 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S16P" /protein_id="YP_003828238.1" /db_xref="GI:302392418" /db_xref="GeneID:9513725" /translation="MAVKIRLRRMGANRDASYRLVVADSRDSRDGRFIEELGHYDPTT EPETVDIKQEKALEWLQNGAKPSSTVKNLFKDQGIMEKFDELKNK" misc_feature complement(1760191..1760409) /locus_tag="Acear_1668" /note="Ribosomal protein S16; Region: Ribosomal_S16; cl00368" /db_xref="CDD:193791" gene complement(1760449..1761810) /locus_tag="Acear_1669" /db_xref="GeneID:9513726" CDS complement(1760449..1761810) /locus_tag="Acear_1669" /note="COGs: COG0541 Signal recognition particle GTPase; InterProIPR004780:IPR013822:IPR004125:IPR000897:IPR 003593; KEGG: hor:Hore_07290 signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; SPTR: B8CW17 Signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle protein" /codon_start=1 /transl_table=11 /product="signal recognition particle subunit FFH/SRP54 (srp54)" /protein_id="YP_003828239.1" /db_xref="GI:302392419" /db_xref="GeneID:9513726" /translation="MIFEGLADKLQDTFDKLRGKGKLSEKDVKSALREVKLALLEADV NFKVVKNFISDIEERAVGKEVMDSLTPAQQVIKIVNEELTDLMGGTQSKLSIASDPPT VIMLVGLQGAGKTTTVGKLAKHLHKNGRRPLLVAGDVYRPAAIKQLQVLGERLDQPVF SMGDKQDPVDIAKAGVSHAESNGRDVVIIDTAGRLHIDEELMGELKDIKAAVNPQEIL LVVDAMTGQDAVNVAESFDDALGVDGITLTKLDGDARGGAALSIRKVTGRPIKFVGTG EKLDDLEPFHPDRMASRILGMGDMLSLIEKAEENIDAEKAKELEEKLRKEEFTLDDFL DQMSQIRNMGPLDQIMDMIPGMGKIKQLDNLDMGEEHLDQIEAIISSMTTEEKRDPSI INGSRRRRIANGSGTEVQDVNRLLKQFKQAQKMMKQLNDMQQGMGGGGGGLGGLGNKF PFM" misc_feature complement(1760569..1761804) /locus_tag="Acear_1669" /note="signal recognition particle protein; Provisional; Region: PRK10867" /db_xref="CDD:182793" misc_feature complement(1761562..1761795) /locus_tag="Acear_1669" /note="SRP54-type protein, helical bundle domain; Region: SRP54_N; pfam02881" /db_xref="CDD:190463" misc_feature complement(1760989..1761507) /locus_tag="Acear_1669" /note="The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal sighnal sequences of newly synthesized polypeptides at the ribosome. The...; Region: SRP; cd03115" /db_xref="CDD:48379" misc_feature complement(1761466..1761489) /locus_tag="Acear_1669" /note="P loop; other site" /db_xref="CDD:48379" misc_feature complement(order(1761055..1761060,1761067..1761069, 1761232..1761234,1761397..1761399)) /locus_tag="Acear_1669" /note="GTP binding site [chemical binding]; other site" /db_xref="CDD:48379" misc_feature complement(1760569..1760829) /locus_tag="Acear_1669" /note="Signal peptide binding domain; Region: SRP_SPB; pfam02978" /db_xref="CDD:190490" gene complement(1761822..1762169) /locus_tag="Acear_1670" /db_xref="GeneID:9513727" CDS complement(1761822..1762169) /locus_tag="Acear_1670" /note="COGs: COG2739 conserved hypothetical protein; InterPro IPR011991:IPR007394:IPR013324; KEGG: hor:Hore_07280 helix-turn-helix protein YlxM/p13 family protein; PFAM: helix-turn-helix protein YlxM/p13 family protein; SPTR: B8CW16 Putative helix-turn-helix protein YlxM/p13 family protein; PFAM: Putative helix-turn-helix protein, YlxM / p13 like" /codon_start=1 /transl_table=11 /product="helix-turn-helix protein YlxM/p13 family protein" /protein_id="YP_003828240.1" /db_xref="GI:302392420" /db_xref="GeneID:9513727" /translation="MLERTVRVGILFDFYGELLTDRQQEMVRLYFYHDLSLGEVAEEC EISRQAVYDNLQRAEKILEDYEKKLGLVARYKYIQQQVDDLTEVVDRIAQEIGDESLE KLQQIIDNLSAEN" misc_feature complement(1761846..1762166) /locus_tag="Acear_1670" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cl01055" /db_xref="CDD:197420" misc_feature complement(1761882..1762166) /locus_tag="Acear_1670" /note="Putative helix-turn-helix protein, YlxM / p13 like; Region: UPF0122; pfam04297" /db_xref="CDD:113081" gene complement(1762255..1763364) /locus_tag="Acear_1671" /db_xref="GeneID:9513728" CDS complement(1762255..1763364) /locus_tag="Acear_1671" /note="COGs: COG0552 Signal recognition particle GTPase; InterPro IPR004390:IPR013822:IPR000897:IPR003593; KEGG: hor:Hore_07270 signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; SPTR: B8CW15 Signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY" /codon_start=1 /transl_table=11 /product="signal recognition particle-docking protein FtsY" /protein_id="YP_003828241.1" /db_xref="GI:302392421" /db_xref="GeneID:9513728" /translation="MFKKLFGRSKKGEDEDQKQPQNQAEAEDEEVEKEENNTDTGGVF NRLETHNPDELEDEDTSETEDEGGFFSRLKDGLSKTRNSFVSQVQNLFTGRSSIDEEL YEELEEILIQADVGVHTTMGLVDELRTIAEEEGIKDPSKLHNVFKEQLEDILDRGADD VYDNHRLTILMVVGVNGVGKTTTIGKIALRAKQNSQDVLLAAGDTFRAGAIEQLEAWG TEVGVDIISHEAGADSAAVAYDAVQAAKARDKDLLVVDTAGRLHTQDNLMEELKKVHR IIDREAEDARVEVLLVLDATTGQNAISQAEMFDKAVDVDGIALTKLDGTAKGGIILAV KEELGIPVKLIGVGEDVEDLQDFEPDAFIDALFAE" misc_feature complement(1762258..1763163) /locus_tag="Acear_1671" /note="signal recognition particle-docking protein FtsY; Provisional; Region: PRK10416" /db_xref="CDD:182441" misc_feature complement(1762915..1763148) /locus_tag="Acear_1671" /note="SRP54-type protein, helical bundle domain; Region: SRP54_N; pfam02881" /db_xref="CDD:190463" misc_feature complement(1762327..1762803) /locus_tag="Acear_1671" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" gene complement(1763385..1764518) /locus_tag="Acear_1672" /db_xref="GeneID:9513729" CDS complement(1763385..1764518) /locus_tag="Acear_1672" /note="KEGG: hor:Hore_07260 peptidase S7, Flavivirus NS3 serine protease; SPTR: B8CW14 peptidase S7, Flavivirus NS3 serine protease" /codon_start=1 /transl_table=11 /product="peptidase S7, Flavivirus NS3 serine protease" /protein_id="YP_003828242.1" /db_xref="GI:302392422" /db_xref="GeneID:9513729" /translation="MQVKGIAKSIVDKLVNRSIELSQGRSAGALGLINQDGYIDALSE IVNGGLSGLPYRQLLSKVVTTAGKSLIEVVNQLPDNAVLISTNPGKTGLITSTSGINT LNLPVVSIGVKQLSLAGVGILYPKSEYFDLATESEKIELKKLAARDMDEEREILKESS KLKLNFLDISEELEVIEIEERPFSISIKSDEEWHLPRLEVDSIDKDFVAELVDKSTSI EQGREVAAMGVIEDGTVVQSGDLVVGGMGYIPSRLLASGYTDISGISLRQAYNKEVPH NAVVVHTHPGGTGVMHRGDAMAGPGMWGRPVIAIGHDKAGEVKGATVIEMQSEVTDLA EEAEKVGQKYYEAQTPEEEAEIRKRRFGIVQEYTDLCKPIEIE" gene complement(1764575..1768141) /locus_tag="Acear_1673" /db_xref="GeneID:9513730" CDS complement(1764575..1768141) /locus_tag="Acear_1673" /note="COGs: COG1196 Chromosome segregation ATPase; InterProIPR011890:IPR011891:IPR003395:IPR010935:IPR 003345:IPR009053; KEGG: hor:Hore_07250 chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; M protein repeat-containing protein; SPTR: B8CW13 Chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type; chromosome segregation protein SMC, primarily archaeal type" /codon_start=1 /transl_table=11 /product="chromosome segregation protein SMC" /protein_id="YP_003828243.1" /db_xref="GI:302392423" /db_xref="GeneID:9513730" /translation="MHLKKIEMHGFKSFAEEVKVEFEPNITAVLGPNGSGKSNIADAI RWVLGEQSAKSLRGSKMEDVIFAGSSQRKPMGIAEVTLTLDNSNGQLPIDYNEVTLGR RVTRSGKSEYLINNSVCRLKDIEELIMGTGLGTEAYSIIGQGKVDEILSSKATERRLI FEEAAGITKHKQRKKEASRKLEKTEQDLNRVNDIIGELEKRVGPLEKEAKKARKYKKY YEELKGLEVNLLLNKYSEIEAELTEVIETRTRFEDKISQVKAQVAEFDSKEEELNLEL DKAIEAISLNKDEIYQTESDIERINNKLEIIKEKRNNADYRINQLENEIKDLRDEIKD LKRTEKENQKKLKTTENRLQEKQEELKTAEEELAAVTDRLEEKEGSKDSAEEDKLEYL NRINKKQNQVTNLTRQIKDIKEEKKEKQEEITEIEANIAAAKTELDELTAEISAIEDD LETEEEAVTAKKEQEEELETRLQKLQDEYNQLDSKRNNYQSKLDVLENMQQKYQGYYR GVKNVLQYHQDNPEFAQLYGVVAELLEVPKEFEIAIETALGSRLQNVVVATEEDAKEA INYLKREKAGRATFLPLNLVDPRSLRQREEEALEVKGALGIAADLIDYQDKFSPVVKN LLGRIIIADNIDAAVTISKKTGQRVKVVTLEGEVVNPGGSMTGGSSQNKNADLLGRSR QIEELSDRIDGLNQKLETLKEEGISVKDRLVSLTERKEEQQEAVHQLDLDLTSKRKDY QQLKEEIERLETDRKQLNNYLNVLDKELSSLKNEKEDISSQLADLTDGNQDIEGIITS IEEEIERIEAKKEEYNEEITDIKVKIASIEQEKNNLKQEADRLQDQIQKAESGISNKK SEIEELRKRKEKLADQKIDFREDQNELKQQKKELEAKLADLKEKKEGLTAEIKEIKEK SQGIRKELEEIQTEHNEYEVKEAQLEMELESIEEKLVDSYEVEIEAEIDDREPIEDYE VVEERIEELKSAIDELGHVNLGAIEEYETLKERFSFMKEQHADLIEARNSLTEVINKI ESRMEKKFKETFDEIKMKFEEVFTELFGGGQAELKLEDPDNLLETGIEINAQPPGKKL QKLSLMSGGEKALTAIALLFALLKVRPSPFYILDEIDAPLDEANVDRFTDFLQNLSSL SQFIVITHRKGTMKAADALYGVTMQESGVSELVSLKLTELAS" misc_feature complement(1764593..1768135) /locus_tag="Acear_1673" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:162739" misc_feature complement(<1767683..1768135) /locus_tag="Acear_1673" /note="Barmotin is a tight junction-associated protein expressed in rat epithelial cells which is thought to have an important regulatory role in tight junction barrier function. Barmotin belongs to the SMC protein family. SMC proteins are large (...; Region: ABC_SMC_barmotin; cd03278" /db_xref="CDD:73037" misc_feature complement(1768028..1768051) /locus_tag="Acear_1673" /note="Walker A/P-loop; other site" /db_xref="CDD:73037" misc_feature complement(order(1767713..1767715,1768025..1768033, 1768037..1768042)) /locus_tag="Acear_1673" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73037" misc_feature complement(1767713..1767724) /locus_tag="Acear_1673" /note="Q-loop/lid; other site" /db_xref="CDD:73037" misc_feature complement(1766219..1766566) /locus_tag="Acear_1673" /note="SMC proteins Flexible Hinge Domain; Region: SMC_hinge; pfam06470" /db_xref="CDD:191533" misc_feature complement(1764614..>1764892) /locus_tag="Acear_1673" /note="Barmotin is a tight junction-associated protein expressed in rat epithelial cells which is thought to have an important regulatory role in tight junction barrier function. Barmotin belongs to the SMC protein family. SMC proteins are large (...; Region: ABC_SMC_barmotin; cd03278" /db_xref="CDD:73037" misc_feature complement(1764833..1764862) /locus_tag="Acear_1673" /note="ABC transporter signature motif; other site" /db_xref="CDD:73037" misc_feature complement(1764773..1764790) /locus_tag="Acear_1673" /note="Walker B; other site" /db_xref="CDD:73037" misc_feature complement(1764755..1764766) /locus_tag="Acear_1673" /note="D-loop; other site" /db_xref="CDD:73037" misc_feature complement(1764674..1764694) /locus_tag="Acear_1673" /note="H-loop/switch region; other site" /db_xref="CDD:73037" gene complement(1768329..1768589) /locus_tag="Acear_1674" /db_xref="GeneID:9513731" CDS complement(1768329..1768589) /locus_tag="Acear_1674" /note="COGs: COG2359 conserved hypothetical protein; InterPro IPR007347; KEGG: tte:TTE1467 hypothetical protein; PFAM: Stage V sporulation protein S; SPTR: A1HN80 Stage V sporulation protein S; PFAM: Stage V sporulation protein S (SpoVS)" /codon_start=1 /transl_table=11 /product="Stage V sporulation protein S" /protein_id="YP_003828244.1" /db_xref="GI:302392424" /db_xref="GeneID:9513731" /translation="MEVLKIASDSKPKSVAGALAAVLRDEGKAELQAIGAGAVNQAVK AIAIARGFVAPSGVDLVSIPAFAEIEIDGEERTAIKFIVEPR" misc_feature complement(1768332..1768589) /locus_tag="Acear_1674" /note="Stage V sporulation protein S (SpoVS); Region: SpoVS; cl01005" /db_xref="CDD:154140" gene complement(1768737..1769762) /locus_tag="Acear_1675" /db_xref="GeneID:9513732" CDS complement(1768737..1769762) /locus_tag="Acear_1675" /note="COGs: COG1243 Histone acetyltransferase; InterPro IPR013785:IPR007197:IPR006638; KEGG: cth:Cthe_0930 radical SAM family protein; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: A3DDY5 radical SAM; PFAM: radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003828245.1" /db_xref="GI:302392425" /db_xref="GeneID:9513732" /translation="MKKRHYIIPIFVPHQGCPHDCVFCNQREITGFQEDMTPKKAARI IEEYLSTMNKENSKIEIAFYGGSFTGLEIKEQTQLLEVAYKYCQEGIVDNLRLSTRPD YIDREILNNLAKYNVQIIELGVQSLADKVLQASCRGHTPEDVFKASRLIKKFGFELGI QLMPGLPKSTQESMFYSVQQAIGLTPDLVRIYPTLVIGGTKLAESYSEGEFTPLTLQE AVEICKEELKLFRSRGIPVVRIGLQPSSGVNKEAVIAGPFHPAFRQLVESNLVLDRIK AYLGAKVDEPQLTFRVNSRFNSVLRGQKNNNLKALQEEYGIKIEVEVDNDLDYREILI AERKQII" misc_feature complement(1769097..1769735) /locus_tag="Acear_1675" /note="Radical SAM; Region: Elp3; smart00729" /db_xref="CDD:128968" misc_feature complement(1769130..1769732) /locus_tag="Acear_1675" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(1769181..1769186,1769274..1769276, 1769394..1769396,1769463..1769471,1769547..1769552, 1769556..1769558,1769688..1769696,1769700..1769702, 1769706..1769708,1769712..1769714)) /locus_tag="Acear_1675" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" gene complement(1769778..1770512) /locus_tag="Acear_1676" /db_xref="GeneID:9513733" CDS complement(1769778..1770512) /locus_tag="Acear_1676" /EC_number="5.4.99.-" /note="COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterProIPR002942:IPR000748:IPR006145:IPR018496:IPR 020103; KEGG: hor:Hore_07230 ribosomal large subunit pseudouridine synthase B; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: B8CW11 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase family" /codon_start=1 /transl_table=11 /product="ribosomal large subunit pseudouridine synthase B" /protein_id="YP_003828246.1" /db_xref="GI:302392426" /db_xref="GeneID:9513733" /translation="MERLQKVMSQAGVASRRKSEDIITAGRVEVNGEVVTELGTKVDP EQDTIKVDGQQIKREKLVYLLLNKPQGYITTVDDPHNRRTVIDLIQDVSQAVHPVGRL DKDTEGLLLLTNDGDLTYALTHPSHGIDKTYMATVKGVPNQSKIEALEKGIKLKDGWT APAEAKLVAELAERAVVSLTIHEGRKHQVKRMLKSVGHPVEELKRIKFGPLDLTGLSP GEYRHLTNSEIKELKAVEDRVTAAEN" misc_feature complement(1769811..1770512) /locus_tag="Acear_1676" /note="16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]; Region: RsuA; COG1187" /db_xref="CDD:31380" misc_feature complement(1770312..1770509) /locus_tag="Acear_1676" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cd00165" /db_xref="CDD:29105" misc_feature complement(order(1770384..1770386,1770390..1770413, 1770432..1770434,1770438..1770443,1770450..1770455, 1770459..1770464,1770468..1770473,1770504..1770506)) /locus_tag="Acear_1676" /note="RNA binding surface [nucleotide binding]; other site" /db_xref="CDD:29105" misc_feature complement(1769889..1770326) /locus_tag="Acear_1676" /note="Pseudouridine synthases are responsible for the synthesis of pseudouridine from uracil in ribosomal RNA. The RsuA subfamily includes Pseudouridine Synthase similar to Ribosomal small subunit pseudouridine 516 synthase. Most of the proteins in this...; Region: PseudoU_synth_RsuA_like; cd02870" /db_xref="CDD:30030" misc_feature complement(order(1769943..1769945,1770204..1770215)) /locus_tag="Acear_1676" /note="active site" /db_xref="CDD:30030" gene complement(1771176..1772327) /locus_tag="Acear_1677" /db_xref="GeneID:9513734" CDS complement(1771176..1772327) /locus_tag="Acear_1677" /EC_number="3.4.16.4" /note="COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; InterProIPR018044:IPR001967:IPR012907:IPR012338:IPR 015956; KEGG: hor:Hore_07220 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; PRIAM: serine-type D-Ala-D-Ala carboxypeptidase; SPTR: B8CW10 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain" /codon_start=1 /transl_table=11 /product="serine-type D-Ala-D-Ala carboxypeptidase" /protein_id="YP_003828247.1" /db_xref="GI:302392427" /db_xref="GeneID:9513734" /translation="MWLTKRNKLLFILIGLIIISFNADIVSAKPDITARSAIVVDVKT GEVLYAKNHHERRPPASTTKIMTGILAIENGNLDTEVTVSDRAAYTGGSSIWLTSGET LKLEELLYGLLLNSGNDAAVAIAEHIGGSVEGFAWMMNRKAREIGALNTTFQNPNGLP QNGHLTTAYDLALITRYALQNDTFAKIVRTVRKTISWEGHEYGRSLLNTNRLLRKFDK VDGVKTGYTDAAGRCLVSAASADNRQVVSVVLKSGQMWHDSIKLLNYGLDNFKQIELI SKDETAHTIRINEAKKEEVDLIAAKEFGIVIPQDEDVEIKKEVRVQNDLKLPIEKGEQ VGKLTFYVAGEKKGIVPLLTKRRVTADSKINNFFQKLTASLLEMTSNFL" misc_feature complement(1771179..1772249) /locus_tag="Acear_1677" /note="D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]; Region: DacC; COG1686" /db_xref="CDD:31872" misc_feature complement(1771578..1772237) /locus_tag="Acear_1677" /note="Beta-lactamase; Region: Beta-lactamase; cl01009" /db_xref="CDD:194006" misc_feature complement(1771254..1771520) /locus_tag="Acear_1677" /note="Penicillin-binding protein 5, C-terminal domain; Region: PBP5_C; pfam07943" /db_xref="CDD:191901" gene complement(1772385..1772789) /locus_tag="Acear_1678" /db_xref="GeneID:9513735" CDS complement(1772385..1772789) /locus_tag="Acear_1678" /note="COGs: COG3874 conserved hypothetical protein; InterPro IPR014229:IPR017975; KEGG: nth:Nther_1649 sporulation protein YtfJ; PFAM: sporulation protein YtfJ; SPTR: B2A4K1 sporulation protein YtfJ; TIGRFAM: sporulation protein YtfJ; PFAM: sporulation protein YtfJ (spore_YtfJ); TIGRFAM: sporulation protein YtfJ" /codon_start=1 /transl_table=11 /product="sporulation protein YtfJ" /protein_id="YP_003828248.1" /db_xref="GI:302392428" /db_xref="GeneID:9513735" /translation="MGEHPIESVMDTTMENIKSMVDVNTIVGDPVETVEGSVIIPVSK VSFGFAAGGSEYVTSKGKENKKDKDGNEFGGGTGAGVMLQPIAFLVVGQDQVRLMSVD DNNGIEKLINAAPELMKELKSITEDDSKFQSN" misc_feature complement(1772424..1772780) /locus_tag="Acear_1678" /note="Sporulation protein YtfJ (Spore_YtfJ); Region: Spore_YtfJ; cl01596" /db_xref="CDD:194173" gene complement(1772762..1773529) /locus_tag="Acear_1679" /db_xref="GeneID:9513736" CDS complement(1772762..1773529) /locus_tag="Acear_1679" /note="KEGG: dae:Dtox_2091 hypothetical protein; SPTR: C1TG23 Putative uncharacterized protein; PFAM: protein of unknown function (DUF2953)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828249.1" /db_xref="GI:302392429" /db_xref="GeneID:9513736" /translation="MNFILFFFLLVVILLAGYFLPINAIVKYKRNDGSDDLRMWVEVW PGIVIYRLQISYLELKGLFAESLLKFKAEIEAIGSPNIEFERNKSIKDLDWEEIIEQL KFIKGMTDQFEALERGLDTFKDELHRLNELTLRNPILLRIIGTLVLGIEGQCKRLKWR TEFGIENPAATGVATGLLWAVKNNLYSFLSFKAEKVVEPEFEVIPNFNQVNELEVEFE SIFSLRLGNIISRGLKIIWTRYKRRFFEKWENIQLNQ" misc_feature complement(1772906..1773049) /locus_tag="Acear_1679" /note="Protein of unknown function (DUF2953); Region: DUF2953; pfam11167" /db_xref="CDD:151609" gene complement(1774163..1775176) /locus_tag="Acear_1680" /db_xref="GeneID:9513737" CDS complement(1774163..1775176) /locus_tag="Acear_1680" /note="COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits; InterProIPR006066:IPR017896:IPR014261:IPR005117:IPR 006067:IPR001450:IPR017900; KEGG: tpd:Teth39_1915 nitrite and sulphite reductase 4Fe-4S region; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C6PAT3 Sulfite reductase, subunit C; TIGRFAM: sulfite reductase, subunit C; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, subunit C" /codon_start=1 /transl_table=11 /product="sulfite reductase, subunit C" /protein_id="YP_003828250.1" /db_xref="GI:302392430" /db_xref="GeneID:9513737" /translation="MNHDIDVGKLTSNCYRQSKVDGEFMLQMRVPGAVIDAKYLSYAQ HVAETWGNGEFHIGTRQTLSLPGINYEDIDEVNEYIKGYIQGVEVELCGVDMEVNEEG FPNLGARNIMACIGNSHCIKANINTTELARKLERRIYPSPYHIKIGISGCPNDCGKGH FNDFGIIGLVDPEYQYDRCIGCGECVEACASHATGVLEKVEGKIEKDDCCCVGCGECV VACPTGAWERNPTDYYRVTIGGRAGKQYPRLGKMFLNWVTEDVVLGIIDNWEEFSAEV LNYEPIYLHGGHLIDMAGYYNFRDKILEGVELNPKAEVADHIYWDETEYRANIHVTAT GNE" misc_feature complement(1774217..1775167) /locus_tag="Acear_1680" /note="sulfite reductase, subunit C; Region: sulfite_red_C; TIGR02912" /db_xref="CDD:131958" misc_feature complement(1774934..1775116) /locus_tag="Acear_1680" /note="Nitrite/Sulfite reductase ferredoxin-like half domain; Region: NIR_SIR_ferr; pfam03460" /db_xref="CDD:190643" gene complement(1775209..1776018) /locus_tag="Acear_1681" /db_xref="GeneID:9513738" CDS complement(1775209..1776018) /locus_tag="Acear_1681" /note="COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterProIPR001221:IPR017927:IPR012165:IPR014260:IPR 008333:IPR001433:IPR019480:IPR017938; KEGG: tpd:Teth39_1916 anaerobic sulfite reductase subunit B; PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; SPTR: C6PAT4 Sulfite reductase, subunit B; TIGRFAM: sulfite reductase, subunit B; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase, subunit B" /codon_start=1 /transl_table=11 /product="sulfite reductase, subunit B" /protein_id="YP_003828251.1" /db_xref="GI:302392431" /db_xref="GeneID:9513738" /translation="MGDNCDCKNELQPEPYLITDIIRETEIEYTFRVKADIMPKPGQF FQLSLPKVGEAPFSVSGIGENWLEFTIRKVGKVTSEAFKLKPGDNLFMRGPYGNSFPV DKYKGEDIVVIAGGTGVCAVKSLLQYFYKNYADVNSVHFLTGFKDKASILYSEELEKY REKFSNTIYSLDNEEIDGFETGFVTEYIDQVPFADFADYQVVIVGPQPMMDAAAAECL EQGVAEDRIWVSMERNMSCGVGKCGHCKIDDTYVCLDGPVFNYTKAKNLID" misc_feature complement(1775212..1775997) /locus_tag="Acear_1681" /note="anaerobic sulfite reductase subunit B; Provisional; Region: PRK08221" /db_xref="CDD:181300" misc_feature complement(1775236..1775967) /locus_tag="Acear_1681" /note="Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases. Clostridium pasteurianum inducible dissimilatory type sulfite reductase is...; Region: sulfite_reductase_like; cd06221" /db_xref="CDD:99817" misc_feature complement(order(1775317..1775322,1775668..1775670, 1775785..1775793,1775803..1775811,1775845..1775856, 1775860..1775862)) /locus_tag="Acear_1681" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99817" misc_feature complement(order(1775845..1775850,1775854..1775856)) /locus_tag="Acear_1681" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99817" misc_feature complement(order(1775728..1775730,1775734..1775736, 1775758..1775760,1775776..1775778,1775785..1775787, 1775794..1775796)) /locus_tag="Acear_1681" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99817" misc_feature complement(order(1775656..1775658,1775662..1775673, 1775683..1775685)) /locus_tag="Acear_1681" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99817" misc_feature complement(order(1775401..1775406,1775581..1775589, 1775665..1775670)) /locus_tag="Acear_1681" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99817" misc_feature complement(order(1775260..1775262,1775284..1775286, 1775293..1775295,1775308..1775310)) /locus_tag="Acear_1681" /note="Iron coordination center [ion binding]; other site" /db_xref="CDD:99817" gene complement(1776019..1777053) /locus_tag="Acear_1682" /db_xref="GeneID:9513739" CDS complement(1776019..1777053) /locus_tag="Acear_1682" /note="InterPro IPR017896:IPR014259:IPR009051; KEGG: tpd:Teth39_1917 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: C6PHZ6 Sulfite reductase, subunit A; TIGRFAM: sulfite reductase, subunit A; TIGRFAM: sulfite reductase, subunit A" /codon_start=1 /transl_table=11 /product="sulfite reductase, subunit A" /protein_id="YP_003828252.1" /db_xref="GI:302392432" /db_xref="GeneID:9513739" /translation="MSYRVNTERMDEILLELQSDYKVYAPVRFEGRGRYSGTDVIRYE EINSVKDVVYDEKSDISPKEIIHPITQRLFYFTEHEYKESKVYDKEILIFARPCDING IERLDTIFLENGDNEDKYYKRLRDKVKFVLMECKEGWDTCFCTSMEANKTDNYSLAIR FEEDELLIEVKDDEFEHLFSTQEETEFTPQFPISNQTTVDIPEINSEELLAEVYELEM WKDYNDRCESCGACTAACITCSCFTTSDVTYTENGDAGERRRVWASCLHEDFTEMAGG DSFRNTPGERMRFRTLHKIYDYQKRFGEEHMCVGCGRCTDRCNELISFSATINRLSEE VAKLKNKEVK" misc_feature complement(1776025..1777053) /locus_tag="Acear_1682" /note="anaerobic sulfite reductase subunit A; Provisional; Region: PRK15055" /db_xref="CDD:185015" gene complement(1777263..1777817) /locus_tag="Acear_1683" /db_xref="GeneID:9513740" CDS complement(1777263..1777817) /locus_tag="Acear_1683" /note="COGs: COG1386 transcriptional regulator protein containing the HTH domain; InterPro IPR005234:IPR011991; KEGG: hor:Hore_07180 transcriptional regulator; PFAM: chromosome segregation and condensation protein ScpB; SPTR: B8CW06 Putative transcriptional regulator; TIGRFAM: segregation and condensation protein B; PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B" /codon_start=1 /transl_table=11 /product="chromosome segregation and condensation protein, ScpB" /protein_id="YP_003828253.1" /db_xref="GI:302392433" /db_xref="GeneID:9513740" /translation="MKNNPEALIEALLFTAVEPLKPKEIKKVTELSLSEIEAAIDNLA AEYDNPSRGVELLEINQGYQLRTKPAYQSYINQLHQPEVNKQLTQASLETLTIIAYKQ PVTRAEIEDIRGVNVSKALKTLQQRGLIAELGRKDTIGNPIIYGTSDKFLEYFGLSDL NELPEPEDFSNLDEEDILEDEELQ" misc_feature complement(1777323..1777799) /locus_tag="Acear_1683" /note="Putative transcriptional regulators (Ypuh-like); Region: DUF387; cl00612" /db_xref="CDD:186106" gene complement(1777828..1778589) /locus_tag="Acear_1684" /db_xref="GeneID:9513741" CDS complement(1777828..1778589) /locus_tag="Acear_1684" /note="COGs: COG1354 conserved hypothetical protein; InterPro IPR003768; KEGG: aoe:Clos_1587 chromosome segregation and condensation protein ScpA; PFAM: chromosome segregation and condensation protein ScpA; SPTR: C4GBE8 Putative uncharacterized protein; PFAM: ScpA/B protein" /codon_start=1 /transl_table=11 /product="chromosome segregation and condensation protein ScpA" /protein_id="YP_003828254.1" /db_xref="GI:302392434" /db_xref="GeneID:9513741" /translation="MSYEVKIDAFEGPIPLLLHLIKQEEVEIYDISIAEITAQYLDYI EAMQELNLEIASEFLVMAADLIEIKINTLLPDDSSEESEEEKVDPRQQLINRLLEYKK YKDLADRLRNQEKRYRKSYTRNLESVLTEIDAEETEVNPLENISLEEFVTTFEELVSE MLEEEQEQKEKETDDKLSHLNREEITIQERMDQLDQQLQQKREIDFAELFAGDYTRLE VVVTFMALLELMKQHKVGIRQEQVFGEIEIHLLDK" misc_feature complement(1777846..1778589) /locus_tag="Acear_1684" /note="ScpA/B protein; Region: ScpA_ScpB; cl00598" /db_xref="CDD:186098" gene complement(1778608..1779594) /locus_tag="Acear_1685" /db_xref="GeneID:9513742" CDS complement(1778608..1779594) /locus_tag="Acear_1685" /EC_number="6.1.1.2" /note="COGs: COG0180 Tryptophanyl-tRNA synthetase; InterProIPR002306:IPR014729:IPR002305:IPR001412:IPR 017969; KEGG: dtu:Dtur_1469 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: B8E106 Tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="tryptophanyl-tRNA synthetase" /protein_id="YP_003828255.1" /db_xref="GI:302392435" /db_xref="GeneID:9513742" /translation="MATKGRIFSGMRPTGKLHLGHLIGVLNNWKDLQDDYDCTFGVVD WHALTTKYDQTEDIKQNRREMVIDWISAGIDPDKSIIYVQSDIPEIAELHLLLSMLVS VSRLERLPTYKDQVRELEVKDSVPFGLLEYPILMAADILIHKADTIPVGEDQLPHIEI TREIARRFNHLYGETFPEPEPKLGEVPKLLGLDGRKMSKSYGNAIYLADEKEEIGDKV NQMVTDPERIRLDDPGHPEVCSVYDYHGIFNSEEVDEIKVNCKNADLGCRDCKVRLTE VLTDYLADIHKKRAELEENPEMIDEILAEGAQEARKRTKETIKEVRAAMNLS" misc_feature complement(1778611..1779588) /locus_tag="Acear_1685" /note="tryptophanyl-tRNA synthetase II; Reviewed; Region: PRK12282" /db_xref="CDD:183400" misc_feature complement(1778758..1779579) /locus_tag="Acear_1685" /note="catalytic core domain of tryptophanyl-tRNA synthetase; Region: TrpRS_core; cd00806" /db_xref="CDD:173903" misc_feature complement(order(1778998..1779000,1779004..1779009, 1779031..1779033,1779124..1779126,1779133..1779138, 1779142..1779147,1779151..1779153,1779178..1779180, 1779187..1779189,1779199..1779201,1779343..1779345, 1779457..1779459,1779472..1779474,1779523..1779525, 1779532..1779537,1779541..1779543,1779559..1779573)) /locus_tag="Acear_1685" /note="active site" /db_xref="CDD:173903" misc_feature complement(1779532..1779543) /locus_tag="Acear_1685" /note="HIGH motif; other site" /db_xref="CDD:173903" misc_feature complement(order(1779190..1779195,1779202..1779207, 1779211..1779213,1779274..1779279,1779283..1779294, 1779298..1779303,1779310..1779318,1779322..1779327, 1779448..1779453,1779460..1779462)) /locus_tag="Acear_1685" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173903" misc_feature complement(1778995..1779009) /locus_tag="Acear_1685" /note="KMSKS motif; other site" /db_xref="CDD:173903" gene complement(1779635..1780231) /locus_tag="Acear_1686" /db_xref="GeneID:9513743" CDS complement(1779635..1780231) /locus_tag="Acear_1686" /note="COGs: COG1994 Zn-dependent protease; InterPro IPR008915; KEGG: hor:Hore_07160 peptidase M50; PFAM: peptidase M50; SPTR: B8CW04 peptidase M50; PFAM: peptidase family M50" /codon_start=1 /transl_table=11 /product="peptidase M50" /protein_id="YP_003828256.1" /db_xref="GI:302392436" /db_xref="GeneID:9513743" /translation="MEIAQFILLVPILLFSLSIHEYSHGKMADFLGDPTPKMTGRLTL NPLAHLDLMGALVLLITRRFGWAKPVQVNPRYFSNPRQGMMYVGLAGPGANILLAVLF SLFLKFFAIPFGLPRVIGMFLQIGVALNLGLAIFNLLPLPPLDGSKILRGLLPRKYDS TLQQIEGYGPFILLFLVFTGLLHNIIGPIWAFFYNILL" misc_feature complement(1779683..1780216) /locus_tag="Acear_1686" /note="Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the...; Region: S2P-M50_like_1; cd06158" /db_xref="CDD:100079" misc_feature complement(order(1779797..1779799,1779821..1779823, 1780160..1780162,1780169..1780174)) /locus_tag="Acear_1686" /note="active site" /db_xref="CDD:100079" misc_feature complement(1779812..1779823) /locus_tag="Acear_1686" /note="putative substrate binding region [chemical binding]; other site" /db_xref="CDD:100079" gene complement(1780235..1782901) /locus_tag="Acear_1687" /db_xref="GeneID:9513744" CDS complement(1780235..1782901) /locus_tag="Acear_1687" /note="COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterProIPR000644:IPR013785:IPR001667:IPR003156:IPR 002646; KEGG: drm:Dred_1131 polynucleotide adenylyltransferase region; PFAM: polynucleotide adenylyltransferase region; hypothetical protein; phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: hypothetical protein; SPTR: A4J3L2 polynucleotide adenylyltransferase region; PFAM: DHH family; DHHA1 domain; CBS domain; poly A polymerase head domain" /codon_start=1 /transl_table=11 /product="polynucleotide adenylyltransferase region" /protein_id="YP_003828257.1" /db_xref="GI:302392437" /db_xref="GeneID:9513744" /translation="MQLITGHKGTDFDSLAAMVAASKLYPEATMVFPGRLSQNVKDFM SLYKDRISVKRPNQLQTELEQNLIDSLIIVDTRLANRLGELKYLAFDSEVELIIYDHH PELDEELTGAWELIEPVGAVTSLLCQQIERRGLEITSFEATLFMLGIYEDTGSLMFNS TTSTDAAAVSFLLENDANLSVVNQFIERPLSSIQQDLFTQLLDSLQAYELDGLEVDVY KAELDEYIGGIAYLTQKLDDLNQADVLFTLVRLDNKILIVARSNVDTLDVSTIVTEYG GGGHRRAASAMVRDKKLALSQLEEEIITMVEEKMEPLVLAGDIMSSPVQTITPDKSME EAEEKMLCYGHSGLIVTEDEDLVGVISRRDVDKVKQHDLMHAPVKGYMSRQVVTIRED TTFKDIQQKLVEYDIGRLPVLNRNNELVGIVTRSDVLRVLYGEADYIKGMQNRYGCSM VEVSQQTFNVKNILKKMESEEYKLLSEIGKIADNLELDVYIVGGFVRDLILGVENFDF DIVVEGNGIKFARELAEELEGEVIEEHQEFGTACVATRLGLKLDVASCRVEYYQSPGA LPEVEASDLKQDLFRRDFTLNALAIKLNSERFGKLIDFFGGKEDLEAGLIRILHNFSF IDDPTRIFRALRFVNRYDFELGQITRELMEHAIDQKVVEGVSLGRLSNELELILKEET AAEILSDLEEFDLLKFFHPQLSWTAKQSKLASEIPWAERWVEELEIEEELAVWQLYLL LLVNPLSVAEAKSLLTELKISNDIIAKVEFIKESDKEKLELLREFNVQPSEVYNSLKS LSLEELVYLVIVSENTEVKDWIEFYLLELRRIELQVTGKDIIELGYEPGPCFEKALQA VKTKKLNGELETYEAERNYLEKYLICLKEEDN" misc_feature complement(1781960..1782901) /locus_tag="Acear_1687" /note="Exopolyphosphatase-related proteins [General function prediction only]; Region: COG0618" /db_xref="CDD:30963" misc_feature complement(1782452..1782895) /locus_tag="Acear_1687" /note="DHH family; Region: DHH; pfam01368" /db_xref="CDD:189957" misc_feature complement(1781807..1782196) /locus_tag="Acear_1687" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair; cl10010" /db_xref="CDD:99705" misc_feature complement(1781615..1781950) /locus_tag="Acear_1687" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature complement(1781612..1781941) /locus_tag="Acear_1687" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with an upstream DHH domain which performs a phosphoesterase function and a downstream polyA polymerase domain. CBS is a small domain originally...; Region: CBS_pair_DHH_polyA_Pol_assoc; cd04595" /db_xref="CDD:73095" misc_feature complement(1780286..1781509) /locus_tag="Acear_1687" /note="tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]; Region: PcnB; COG0617" /db_xref="CDD:30962" misc_feature complement(1781063..1781485) /locus_tag="Acear_1687" /note="Nucleotidyltransferase (NT) domain of ClassII CCA-adding enzymes; Region: NT_ClassII-CCAase; cd05398" /db_xref="CDD:143388" misc_feature complement(order(1781141..1781143,1781150..1781161, 1781231..1781233,1781246..1781248,1781288..1781290, 1781375..1781377,1781381..1781383,1781408..1781413, 1781420..1781425)) /locus_tag="Acear_1687" /note="active site" /db_xref="CDD:143388" misc_feature complement(order(1781141..1781143,1781153..1781161, 1781375..1781377,1781381..1781383,1781411..1781413, 1781420..1781425)) /locus_tag="Acear_1687" /note="NTP binding site [chemical binding]; other site" /db_xref="CDD:143388" misc_feature complement(order(1781246..1781248,1781375..1781377, 1781381..1781383)) /locus_tag="Acear_1687" /note="metal binding triad [ion binding]; metal-binding site" /db_xref="CDD:143388" gene complement(1783060..1784373) /locus_tag="Acear_1688" /db_xref="GeneID:9513745" CDS complement(1783060..1784373) /locus_tag="Acear_1688" /EC_number="4.1.1.20" /note="COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR002986:IPR000183:IPR009006; KEGG: pth:PTH_1235 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: C0GG16 Diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase" /codon_start=1 /transl_table=11 /product="diaminopimelate decarboxylase" /protein_id="YP_003828258.1" /db_xref="GI:302392438" /db_xref="GeneID:9513745" /translation="MVLHGTMEVNEKGNLEVGGCDVTNIATEYGTPLYILDEEELRDN CRAYRQAFEEWYPNSETIYASKAFMSLTICKIVEEEGLGLDVVSGGELYTALEADFPT DKIYFHGNNKTPEELEMVLNEEIGRIVVDNNYELELLNELADQQGKRADILIRVTPGV EAHTHSYIQTGQTDSKFGVGIQNGLALETVKKAVELENIDVKGIHCHIGSQIFNLESF EVAVDVMLDFVEEVKIETGLVMEELNIGGGIGIKYTDKDQSVSIDQYAELVAKAIKQK CEEINIPLPKIINEPGRSIIGTAGSTIYTVGSIKNIPDVRKYVAVDGGMPDNIRPALY EAEYEAIVANKANRKPEEVVSITGKCCESGDMLIWDIELPEMEPGDVLLTPCTGAYGY AMANNYNSLPKPGVVLINNGQVEEIIRGERYEDLVAKEEIPARLK" misc_feature complement(1783084..1784352) /locus_tag="Acear_1688" /note="diaminopimelate decarboxylase; Region: lysA; TIGR01048" /db_xref="CDD:188105" misc_feature complement(1783147..1784289) /locus_tag="Acear_1688" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase; Region: PLPDE_III_DapDC; cd06828" /db_xref="CDD:143501" misc_feature complement(order(1783180..1783182,1783192..1783194, 1783204..1783206,1783291..1783293,1783372..1783374, 1783384..1783386,1783495..1783506,1783630..1783635, 1783744..1783746,1783753..1783755,1783759..1783761, 1783909..1783911,1784050..1784052,1784119..1784121, 1784176..1784178,1784182..1784184)) /locus_tag="Acear_1688" /note="active site" /db_xref="CDD:143501" misc_feature complement(order(1783204..1783206,1783291..1783293, 1783495..1783506,1783630..1783635,1783744..1783746, 1783753..1783755,1783759..1783761,1783909..1783911, 1784050..1784052,1784119..1784121,1784176..1784178, 1784182..1784184)) /locus_tag="Acear_1688" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143501" misc_feature complement(order(1783180..1783182,1783192..1783194, 1783204..1783206,1783288..1783293,1783372..1783374, 1783384..1783386,1783495..1783497,1783744..1783746, 1783753..1783755,1784176..1784178)) /locus_tag="Acear_1688" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143501" misc_feature complement(order(1783291..1783293,1784176..1784178)) /locus_tag="Acear_1688" /note="catalytic residues [active]" /db_xref="CDD:143501" misc_feature complement(order(1783165..1783167,1783174..1783185, 1783189..1783197,1783279..1783281,1783285..1783302, 1783414..1783416,1783420..1783422,1783444..1783446, 1783450..1783452,1783840..1783851,1783972..1783974, 1783981..1783983,1784026..1784028,1784038..1784046, 1784101..1784106,1784110..1784115,1784158..1784163)) /locus_tag="Acear_1688" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143501" gene complement(1784403..1784693) /locus_tag="Acear_1689" /db_xref="GeneID:9513746" CDS complement(1784403..1784693) /locus_tag="Acear_1689" /note="COGs: COG1254 Acylphosphatase; InterPro IPR020456:IPR001792:IPR017968; KEGG: hor:Hore_08420 cylphosphatase; PFAM: acylphosphatase; SPTR: B8CWD0 Acylphosphatase; PFAM: Acylphosphatase" /codon_start=1 /transl_table=11 /product="acylphosphatase" /protein_id="YP_003828259.1" /db_xref="GI:302392439" /db_xref="GeneID:9513746" /translation="MNRDSEMLRLHIFISGRVQGVGFRNFIRTKAEELNLTGWIKNLE DGRVEAVFAGRENKVKEISAAVQTGPSLARVDNVDSKQEEYVDEFDKFRIVF" misc_feature complement(1784409..1784669) /locus_tag="Acear_1689" /note="Acylphosphatase; Region: Acylphosphatase; cl00551" /db_xref="CDD:193864" gene complement(1784775..1784924) /locus_tag="Acear_1690" /db_xref="GeneID:9513747" CDS complement(1784775..1784924) /locus_tag="Acear_1690" /note="KEGG: tye:THEYE_A0511 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828260.1" /db_xref="GI:302392440" /db_xref="GeneID:9513747" /translation="MKVPQRLQTKLQELGIEVVIATTDDAVEIFNRRYDTDDQKAAAG FHLTC" misc_feature complement(1784784..>1784924) /locus_tag="Acear_1690" /note="Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as...; Region: Mth938-like; cl00182" /db_xref="CDD:193696" gene complement(1785102..1785671) /locus_tag="Acear_1691" /db_xref="GeneID:9513748" CDS complement(1785102..1785671) /locus_tag="Acear_1691" /note="COGs: COG1309 transcriptional regulator; InterProIPR001647:IPR012287:IPR015893:IPR011075:IPR 009057; KEGG: hmo:HM1_0881 transcriptional regulator, TetR family, PFAM: regulatory protein TetR; SPTR: B0TAN2 transcriptional regulator, tetr family, PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_003828261.1" /db_xref="GI:302392441" /db_xref="GeneID:9513748" /translation="MNSKQEKIFTAAIEKFSQKGSTNTTMQEIAETAGVGKGTLYRYF KNKEDLIFSLIKYGIDEMASKVKEAVENVQDPVKKLEIVIEVQLEFYNQYRGFCKFLT REIWGPQSKFEEHIKEIRTNNTVIIEDIISQGIEEGKLKGINAELGAVSLSGMINITA LHWFMFHESFPVEKIKENLISLYFDGIII" misc_feature complement(1785111..1785662) /locus_tag="Acear_1691" /note="Transcriptional regulator [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:31500" misc_feature complement(1785510..1785650) /locus_tag="Acear_1691" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene complement(1785689..1786867) /locus_tag="Acear_1692" /db_xref="GeneID:9513749" CDS complement(1785689..1786867) /locus_tag="Acear_1692" /note="KEGG: hor:Hore_08470 hypothetical protein; SPTR: B8CWD5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828262.1" /db_xref="GI:302392442" /db_xref="GeneID:9513749" /translation="MKRLRCLTVILVLVLILSSTAVVQGLEISTDIKLDLERDTDENK TDDREKINLTLEEQFNFTTDGYLDLEIESDYEDDTDIGIHEAYINYYTRDIDWRLGKQ EVSWGSAYKIKPTDYFSPNDVSDMHPLDEKFGVTGVKGIYYAPNGLEVTGIAIPDFEA DEVEDGREAEVFKAATEERPTISDYTVQDADDLQLGVKVTKRRVNNFDLSFSAYHGRD NLPILDKKKTKNNLDPTAPKAFIKYPEVTKSGFDIIGDIDDMGIWLETAYSDYDDSQY DDIFETAVGIDYKFDSDLYLVGQWYNKEGRLSSEPKINAFNFYASKPVWNFHELEFTA LYDTESDAYLLEPQFNYSIDDSIELQVGATYAHNEDDAGGMVSALAQDRLYTRLNIEF " gene complement(1786896..1787666) /locus_tag="Acear_1693" /db_xref="GeneID:9513750" CDS complement(1786896..1787666) /locus_tag="Acear_1693" /note="KEGG: hor:Hore_08460 hypothetical protein; SPTR: B8CWD4 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828263.1" /db_xref="GI:302392443" /db_xref="GeneID:9513750" /translation="MMKRIMIVTLIMVLVLSMSGLVSAQELSGDDVLDKVEESIDAQS SQVKLRMELYNESGSKRTRELEAYTKDGEYDKALICFLAPASVKDTAFLSQEKKSDDE DMYLYMPALGNVRKIAGSQKNGSFVGTDFSYNDLSILGGGKYKEDYQATILDEDDKEY LLRLVPTDEDIEYKFVKMWVQKSNWFPTKLEFYDKDKELYKELISEDIKERSGYWTAE KMTMKDLDEGSKTVIYLDEITYDLELNDRIFTVRYLRR" misc_feature complement(1787070..>1787372) /locus_tag="Acear_1693" /note="Outer membrane lipoprotein carrier protein LolA; Region: LolA; cl01065" /db_xref="CDD:194024" gene complement(1787677..1789965) /locus_tag="Acear_1694" /db_xref="GeneID:9513751" CDS complement(1787677..1789965) /locus_tag="Acear_1694" /note="COGs: COG1033 exporter of the RND superfamily protein; InterProIPR001036:IPR000731:IPR004767:IPR003392:IPR 004869; KEGG: hor:Hore_08450 efflux transporter, , hydrophobe/amphiphile efflux-3 (HAE3) family; PFAM: MMPL domain protein; patched family protein; SPTR: B8CWD3 Efflux transporter, , hydrophobe/amphiphile efflux-3 (HAE3) family; TIGRFAM: efflux transporter, , hydrophobe/amphiphile efflux-3 (HAE3) family; PFAM: MMPL family; TIGRFAM: The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family" /codon_start=1 /transl_table=11 /product="efflux transporter, , hydrophobe/amphiphile efflux-3 (HAE3) family" /protein_id="YP_003828264.1" /db_xref="GI:302392444" /db_xref="GeneID:9513751" /translation="MKFIKDIVHKYPKGIIAITILITIFFAYQAADIQINTDIKKMFP EGDPVVDTFDRVSERYGGAEYVVLMLQDENIMDRESLGHIDEITTKMEEIEGVNKAQS ITNIEEIRGQGFTVEVGDFIKDLPATGEEAKQLADKALTKERYLGTLISKDLKAATII AQLKPDSDQQHVVSKVKEIRTEADLTEESYLTGNPVLTKTMADNMKSDILKLFPFVSV VVMGILFTSFRSLRGILLPIIVVLLSVIWTVGFVAWLGKTLSIVSTVLPVLLVSVGSA YAIHFLARFYEDQLEGLSKSEAITESILKVGIAIIMAGVTTIVGFSSLGLSELTIIKD FGLFTAVGVFVALVMSITFLPAVLELMRSPKRFQAAEKRPLLDRIFSLLFKTVKKHNS LVIIVVIVISTLSLWVAPQIQPETNYITFFQQNSEIRQANRLVNSKFGGSDSLEIIID TEETDGIEDPEFLQKVDKLQAQLEELELLSNTMSVVDLLEEENQALNEGKEEYNRLPK RGIAQYLLLLSSDDDDLLEDYIDFDHREVRIRTMTANAGSKKTERTLTKVTELVNNQF SSDEYKVTITGIPVLRNTLTDMIVSSQIRSLLASIVFAFIITSILLKSPVKGFVCSFP IAVTVLLNFGLMGWTAIPLNVATSMIASIAVGVGVDYSIHCYTRYQEEREKGVSIMES LQVAIRTIGRANYFNATAVTAGFLVLLFSSFPPLRTFGLLTSITMVVSFLGAMVLLPS LVIVGQRITEALSGDDDVTLNN" misc_feature complement(1787734..1789884) /locus_tag="Acear_1694" /note="Predicted exporters of the RND superfamily [General function prediction only]; Region: COG1033" /db_xref="CDD:31236" gene complement(1790061..1791011) /locus_tag="Acear_1695" /db_xref="GeneID:9513752" CDS complement(1790061..1791011) /locus_tag="Acear_1695" /note="COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR008275:IPR002731; KEGG: tpd:Teth39_0552 CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; SPTR: C6PJ80 CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase" /codon_start=1 /transl_table=11 /product="CoA-substrate-specific enzyme activase" /protein_id="YP_003828265.1" /db_xref="GI:302392445" /db_xref="GeneID:9513752" /translation="MKGYLGIDVGSVSTNLVLLDENREVKEKLYLRTQGRPIDIVQSG LEELGSKVDDLEIRAVGTTGSARDLAGVIVGADIVKNEITAHAVAASNIVPEVKTVLE IGGQDSKITILRNGVVVDFGMNTVCAAGTGSFLDQQASRLNIPIEEFGQYALQADNPV RIAGRCSVFAESDMIHKQQLGHSTEDIIAGLCEALVRNYLNNVGQGKEIKEPIVFQGG VAANDGIKDAFARSLDAEIIVPKHHDVMGAIGAGILAQERVQDKDETSFKGFDASDFD YEVSSFNCDGCPNSCEIINIHQDDELVARWGSKCPKWEAV" misc_feature complement(1790250..1790999) /locus_tag="Acear_1695" /note="FGGY family of carbohydrate kinases, N-terminal domain; Region: FGGY_N; cl09121" /db_xref="CDD:195797" gene complement(1791008..1792108) /locus_tag="Acear_1696" /db_xref="GeneID:9513753" CDS complement(1791008..1792108) /locus_tag="Acear_1696" /note="COGs: COG3581 conserved hypothetical protein; KEGG: hor:Hore_07100 hypothetical protein; SPTR: B8CVZ8 Uncharacterized protein conserved in bacteria; PFAM: CoA enzyme activase uncharacterised domain (DUF2229)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828266.1" /db_xref="GI:302392446" /db_xref="GeneID:9513753" /translation="MKVTFPHMGQMNLSVKTLLRELDLEVVEPPPITDRTLDLGVKHA PEFACLPLKINIGNYIEALEKGADTIIMAGGCGPCRFGYYGEVQREILKDLDYDFEMV IFEPFQGSWQNFLQQFKFIFKHLSWWKLWSAWKLAWTKCQLIDEAAEYTNKLRGYAVN PELVTEVYEDFLMEIEDLHDRERLQSAVIEMKNQILDLEIDWQKEPLKVGIVGEIYVV LEPFTNLNLEKKLGEMGVIVDRSIYLSDWISEHLFSSSVDSEEHRRIEEAAEPYLKHF VGGHGLETIGRTVLYNQEGYNGVVQLAPFTCMPEIVAESILPEVSRDLDLPVLSLTLD EHTGEAGYITRLEAFVDLLERKQQITTGGQVI" misc_feature complement(1791014..1792108) /locus_tag="Acear_1696" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3581" /db_xref="CDD:33381" misc_feature complement(1791035..1792060) /locus_tag="Acear_1696" /note="CoA enzyme activase uncharacterised domain (DUF2229); Region: DUF2229; cl12083" /db_xref="CDD:159743" gene complement(1792105..1793028) /locus_tag="Acear_1697" /db_xref="GeneID:9513754" CDS complement(1792105..1793028) /locus_tag="Acear_1697" /note="COGs: COG3580 conserved hypothetical protein; KEGG: aoe:Clos_2152 hypothetical protein; SPTR: A8MIQ6 Putative uncharacterized protein; PFAM: CoA enzyme activase uncharacterised domain (DUF2229)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828267.1" /db_xref="GI:302392447" /db_xref="GeneID:9513754" /translation="MTVKVGIPKSLLYFHYYPAWKTFFQQLGAKVVESDDSNQSIIDR GIKLSVDEACFPVKVCHGHIVNLRNKADYIFLPRIISVVKDEYVCPKLMGLADMIKNN ISNLPKLLTPTINHNQGWLDLLESNLKLGAEFTDDRFQIMKAHWQARKALRRYQENLI KEPKQNRLTIALLGHAYLLNDEYLSLGLKEKLEELGVEVITPQNLTERQIDKGANKLS KSLFWTFNREIIGTAYYLFEHQEVDGFIQLAAFGCGPDALIGELIERKAKRRSDIHFM SLNLDEHTGEAGLETRLEAFVDMIRWEVKGA" misc_feature complement(1792414..1793019) /locus_tag="Acear_1697" /note="CoA enzyme activase uncharacterised domain (DUF2229); Region: DUF2229; cl12083" /db_xref="CDD:159743" misc_feature complement(1792132..>1792350) /locus_tag="Acear_1697" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3581" /db_xref="CDD:33381" gene complement(1793060..1793782) /locus_tag="Acear_1698" /db_xref="GeneID:9513755" CDS complement(1793060..1793782) /locus_tag="Acear_1698" /note="COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: npu:Npun_F3111 zinc/iron permease; PFAM: zinc/iron permease; SPTR: C1YWB9 Predicted divalent heavy-metal cations transporter; PFAM: ZIP Zinc transporter" /codon_start=1 /transl_table=11 /product="zinc/iron permease" /protein_id="YP_003828268.1" /db_xref="GI:302392448" /db_xref="GeneID:9513755" /translation="MSSLVKVIIYSSLAGSAILIGGYLGTKDISDRLLSAMLSFGAGI LISVISFSLIPEAYREAGVLGSSVSFLLGGIFFLIIDSYIEYRLNSGFGIAIGTALDD LPEAISMGVGFATKSGGLGIVLAISIFLHNIPEGFLTTEEMVNVGQIDKKFAYLIAGS IALINPMGAIIGFEFLVGLSEFWLGSIMAFAGGAILYMIVDEMIPRAVKVGSKVEVLG ILLGFLVSFLLGETFMSTPLSF" misc_feature complement(1793093..1793782) /locus_tag="Acear_1698" /note="Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]; Region: COG0428; cl00437" /db_xref="CDD:185996" gene complement(1793792..1795258) /locus_tag="Acear_1699" /db_xref="GeneID:9513756" CDS complement(1793792..1795258) /locus_tag="Acear_1699" /note="InterPro IPR004995; KEGG: hor:Hore_07080 GerA spore germination protein; PFAM: GerA spore germination protein; SPTR: B8CVZ6 GerA spore germination protein; PFAM: Bacillus/Clostridium GerA spore germination protein" /codon_start=1 /transl_table=11 /product="GerA spore germination protein" /protein_id="YP_003828269.1" /db_xref="GI:302392449" /db_xref="GeneID:9513756" /translation="MKELTKNLDHNLDYLQDELHADLSFDVLTRTFDVGNRKAGLIYL DGFIKDQLIYILNRLLDVERKDLSVDAIQKVLDKHLPYYEVSTVTTLDDAVDEILSGP QVLLIDGETEAIVIDGRTWMGTSPDEPELEKSTRGPGDGFVETMLFNVQMVRRRLRDP ELVTEVQQVGARSKNDVAMLYIDDIVDPGLVKKIKNKIKKIKVDGLPMADKTIEDFLT GDNLNPLPKVRYTERPDIVSAHLLEGKICIIVDNSPTALILPATFFDQVQSLEDYRQP PLPGTYLKLLRLFATGVSLFLPVIWLLVALQPELLPETLSFIGPKETGQIPLGIQFII ASLGIDFVRMASFQVPSALATSLGIIGALLLGDFAAKVGLFVPETIIYMAIGAIGNFA ISGFELALTIKLLRFILLILVTSFKLYGFIIGTVAIVALFVFSKSFGISYLWPLIPFD WNALKSHIIRQSILDLSHRRPNIHSPKDSDRYPEDNQE" misc_feature complement(1793840..1795228) /locus_tag="Acear_1699" /note="Bacillus/Clostridium GerA spore germination protein; Region: GerA; pfam03323" /db_xref="CDD:190601" gene complement(1795242..1795829) /locus_tag="Acear_1700" /db_xref="GeneID:9513757" CDS complement(1795242..1795829) /locus_tag="Acear_1700" /note="KEGG: bbe:BBR47_24020 probable stage V sporulation protein AE; SPTR: A1HTP1 Stage V sporulation protein AE" /codon_start=1 /transl_table=11 /product="stage V sporulation protein AE" /protein_id="YP_003828270.1" /db_xref="GI:302392450" /db_xref="GeneID:9513757" /translation="MYNVADQAIIITDGDNTACRAVENAGQKLGVRTISKSAGTPTDH SGEEIIKLIKEAESDTALVMFDDEGDKNKGSGEQAMERVLAADEIEILGILAVASDTK DVVGIKPDFSVTNQAEVIDAPVTKDGSPESADHLYLEGDTVDIINEFSPQLVIGIGDI GKMDHQDDHNKGCPITTKAIEEILSRSGKSYERVN" gene complement(1795843..1796193) /locus_tag="Acear_1701" /db_xref="GeneID:9513758" CDS complement(1795843..1796193) /locus_tag="Acear_1701" /note="InterPro IPR005562; KEGG: hor:Hore_07070 sporulation stage V protein AE; PFAM: SpoVA protein; SPTR: B8CVZ5 sporulation stage V protein AE; PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE" /codon_start=1 /transl_table=11 /product="SpoVA protein" /protein_id="YP_003828271.1" /db_xref="GI:302392451" /db_xref="GeneID:9513758" /translation="MNYLTAFLVGGLICGLGQLFLDYTNYTPAHLLVTMVTVGAILTG LGLFQPLIDFAGAGVTALVINFGHVVTKGVLNEVNRNGFLGLFAGILELGSVGISASI VIGFLMAAIFRPKE" misc_feature complement(1795849..1796187) /locus_tag="Acear_1701" /note="SpoVA protein; Region: SpoVA; cl04298" /db_xref="CDD:194825" gene complement(1796194..1797255) /locus_tag="Acear_1702" /db_xref="GeneID:9513759" CDS complement(1796194..1797255) /locus_tag="Acear_1702" /note="InterPro IPR010894; KEGG: mta:Moth_1375 stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein; SPTR: Q2RIQ1 Stage V sporulation AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD" /codon_start=1 /transl_table=11 /product="stage V sporulation protein AD" /protein_id="YP_003828272.1" /db_xref="GI:302392452" /db_xref="GeneID:9513759" /translation="MNKSIGQQTISFESQPKIISSSAIVGPKEGDGPLGEYFDKVLDD SYYQQDTWEKAERKMTKENIDLLLTKAKLSPDKIDYLVGGDLLNQVVTSNFSAVKFPV PYFGIYGACSTLAEGLILGAVLIDGGFGNRVINFTSSHYQSAERQYRTPNEYGDKYPP YKQWTATGAGAMITSRDGSGPVITEATPGQVVDLGIKDPQDMGSAMAPAAADTILQHL EDTGRTPNDYDLIVTGDLGEVGSEILAELLKEKGVDIADSHDDCGLMLYNSDQGVGAG GSGCACSAVVTASYLLPYINNGNFNRIFVVATGSLLSSVTSLQGDSIPCIAHGVVIEN NSKSNAVGSIESKVKSEGK" misc_feature complement(1796248..1797255) /locus_tag="Acear_1702" /note="stage V sporulation protein AD; Validated; Region: PRK08304" /db_xref="CDD:181369" gene complement(1797278..1797724) /locus_tag="Acear_1703" /db_xref="GeneID:9513760" CDS complement(1797278..1797724) /locus_tag="Acear_1703" /note="InterPro IPR014203:IPR005562; KEGG: hor:Hore_07050 sporulation stage V protein AC; PFAM: SpoVA protein; SPTR: B8CVZ3 sporulation stage V protein AC; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC" /codon_start=1 /transl_table=11 /product="stage V sporulation protein AC" /protein_id="YP_003828273.1" /db_xref="GI:302392453" /db_xref="GeneID:9513760" /translation="MADINKNSKEYKKLVKKVHPSQSKFKNFLLAYLIGGLIAVIGEL ITMSLTAQGLPLNEAGPLMSVSMIFIGGLLTGLGVYDRIAQYAGAGTIVPITGFANAI VAPAMEYKQDGYVLGLGAKMYNIAGPVLTYAMLSGFTIGIIKLIFA" misc_feature complement(1797284..1797700) /locus_tag="Acear_1703" /note="SpoVA protein; Region: SpoVA; cl04298" /db_xref="CDD:194825" gene complement(1797731..1797934) /locus_tag="Acear_1704" /db_xref="GeneID:9513761" CDS complement(1797731..1797934) /locus_tag="Acear_1704" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828274.1" /db_xref="GI:302392454" /db_xref="GeneID:9513761" /translation="MLREKNLFIILTIIILLTLAVLSWMLVNSSLFDPELSPGAKKVF NEYKLEEANLNSNDRFRLKLSMR" gene complement(1798610..1799371) /locus_tag="Acear_1705" /db_xref="GeneID:9513762" CDS complement(1798610..1799371) /locus_tag="Acear_1705" /note="COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR000943:IPR014322:IPR014284:IPR011991:IPR 007627:IPR007624:IPR007630:IPR013325:IPR013324; KEGG: mta:Moth_1496 sigma 28 (flagella/sporulation); PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: Q2RID4 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma subunit, RpoX/SigF" /protein_id="YP_003828275.1" /db_xref="GI:302392455" /db_xref="GeneID:9513762" /translation="MNNNSLNIPQKELLSEAETKELLKKAQAGDQKAKDKLVNHNVKL VLKVAHRFANKNYDYEELFQIGSIGLLKAIERFDLERDVKFSTYAVPLIIGEIKRFLR DDDAVKVSRSLKRRAHRINEVKESLTAELNREPTIQEIAEEMEVDKEEIVNALEAVRE PTSIYSPVYENEGNSIELVDQLAASSENQEQEIDRLALREVIDELKTRERLILKLRFF DEKTQQEVADRIGVSQVQVSRLERKIIDKVREELD" misc_feature complement(1798616..1799227) /locus_tag="Acear_1705" /note="RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; Region: SigBFG; TIGR02980" /db_xref="CDD:188264" misc_feature complement(1799063..1799227) /locus_tag="Acear_1705" /note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542" /db_xref="CDD:146937" misc_feature complement(<1798853..1799017) /locus_tag="Acear_1705" /note="Sigma-70 region 3; Region: Sigma70_r3; pfam04539" /db_xref="CDD:146934" misc_feature complement(1798625..1798789) /locus_tag="Acear_1705" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cd06171" /db_xref="CDD:100119" misc_feature complement(order(1798637..1798639,1798643..1798648, 1798652..1798660,1798664..1798669,1798673..1798675, 1798703..1798708,1798724..1798726,1798754..1798756)) /locus_tag="Acear_1705" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:100119" gene complement(1799384..1799815) /locus_tag="Acear_1706" /db_xref="GeneID:9513763" CDS complement(1799384..1799815) /locus_tag="Acear_1706" /note="COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); InterPro IPR010194:IPR003594; KEGG: hor:Hore_07010 anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B8CVY9 Putative anti-sigma regulatory factor, serine/threonine protein kinase; TIGRFAM: anti-sigma F factor; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: anti-sigma F factor" /codon_start=1 /transl_table=11 /product="anti-sigma regulatory factor, serine/threonine protein kinase" /protein_id="YP_003828276.1" /db_xref="GI:302392456" /db_xref="GeneID:9513763" /translation="MSKNNARLELKSISDNIGLARVTVASFAAQLDFTISEIEEIKVA VSEAVSNAIIHGYKDETGIIGINLEIDGDKLIIEVEDSGRGISNIEQACEPSYTTADR MGLGLVFIDSFMDELSIDSELEQGTKIRMITSPEKTEKKVN" misc_feature complement(1799423..1799695) /locus_tag="Acear_1706" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(1799429..1799431,1799435..1799440, 1799453..1799455,1799459..1799461,1799495..1799506, 1799558..1799563,1799567..1799569,1799573..1799575, 1799579..1799581,1799654..1799656,1799663..1799665, 1799675..1799677)) /locus_tag="Acear_1706" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(1799663..1799665) /locus_tag="Acear_1706" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(1799498..1799500,1799504..1799506, 1799561..1799563,1799567..1799569)) /locus_tag="Acear_1706" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(1799838..1800176) /locus_tag="Acear_1707" /db_xref="GeneID:9513764" CDS complement(1799838..1800176) /locus_tag="Acear_1707" /note="COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658:IPR014237; KEGG: aac:Aaci_1746 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1PTX4 Anti-sigma factor antagonist; TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma F factor antagonist" /codon_start=1 /transl_table=11 /product="anti-sigma-factor antagonist" /protein_id="YP_003828277.1" /db_xref="GI:302392457" /db_xref="GeneID:9513764" /translation="MELEIERVGVNLIVRIDGSLDLHTVDTLRKRIDEKLTGEVGIQN MILNLKNVDFIDSSGLGFIIGRYKQINNHGGKLKIINVNNSIKQVFELSGILKIVDVF TDEQEALQAV" misc_feature complement(1799871..1800170) /locus_tag="Acear_1707" /note="Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation; Region: STAS_anti-anti-sigma_factors; cd07043" /db_xref="CDD:132914" misc_feature complement(order(1799892..1799894,1799898..1799903, 1799913..1799915,1799979..1799984,1799991..1799999, 1800003..1800011,1800015..1800017,1800090..1800092, 1800108..1800116,1800120..1800122)) /locus_tag="Acear_1707" /note="anti sigma factor interaction site; other site" /db_xref="CDD:132914" misc_feature complement(1800006..1800008) /locus_tag="Acear_1707" /note="regulatory phosphorylation site [posttranslational modification]; other site" /db_xref="CDD:132914" gene complement(1800304..1801497) /locus_tag="Acear_1708" /db_xref="GeneID:9513765" CDS complement(1800304..1801497) /locus_tag="Acear_1708" /EC_number="3.4.16.4" /note="COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; InterProIPR018044:IPR012907:IPR001967:IPR012338:IPR 015956; KEGG: hor:Hore_06980 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; PRIAM: serine-type D-Ala-D-Ala carboxypeptidase; SPTR: B8CVY6 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain" /codon_start=1 /transl_table=11 /product="serine-type D-Ala-D-Ala carboxypeptidase" /protein_id="YP_003828278.1" /db_xref="GI:302392458" /db_xref="GeneID:9513765" /translation="MVKRIISIILLVFLLCLSFSLTLSAEELPDPEFDLEAKSAVLME AKSGKVIYEKNAHEELPPASITKTMTLLLTMEAIDEGKANLDEAVTTSEYAAGMGGSQ IWLEPGEEMKLEEMIKAIAIVSANDACVAVAEHLYGTEEVFVNAMNEKADELGLDDTH FVNTNGLPVEDSDKRGNYTSAHDVGVMSRELVTKYPQVLDYTKIWIDHLRDGDSFLRN TNNLVRFYKGADGLKTGHTSQAGFGVVATAERKGLRFIAVVMKEETSDTRFKEAGELL SYGFSIYRSVPVIQKGEVAIDEVEIYKGKNPKVKAVARKDLTAAVIKGNEGNLKRQIL VKEDLTAPLKRGEKIGELRVLSDGQKIASVDLVANREVQKGNIIQVIIQLLKKFLLNI VNVFN" misc_feature complement(1800331..1801425) /locus_tag="Acear_1708" /note="D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]; Region: DacC; COG1686" /db_xref="CDD:31872" misc_feature complement(<1800775..1801398) /locus_tag="Acear_1708" /note="Beta-lactamase; Region: Beta-lactamase; cl01009" /db_xref="CDD:194006" misc_feature complement(1800376..1800651) /locus_tag="Acear_1708" /note="Penicillin-binding protein 5, C-terminal domain; Region: PBP5_C; pfam07943" /db_xref="CDD:191901" gene complement(1801634..1802938) /locus_tag="Acear_1709" /db_xref="GeneID:9513766" CDS complement(1801634..1802938) /locus_tag="Acear_1709" /EC_number="2.4.2.2" /EC_number="2.4.2.4" /note="COGs: COG0213 Thymidine phosphorylase; InterProIPR000053:IPR018090:IPR020072:IPR000312:IPR 017459:IPR013102:IPR017872; KEGG: hor:Hore_06970 thymidine phosphorylase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; PRIAM: Pyrimidine-nucleoside phosphorylase; SPTR: B8CVY5 Thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase" /codon_start=1 /transl_table=11 /product="thymidine phosphorylase" /protein_id="YP_003828279.1" /db_xref="GI:302392459" /db_xref="GeneID:9513766" /translation="MRAYDIILKKRNGKELATAEIEFLIGEYTAGRLPDYQLAAWAMA VFFTGMSKRETADLTMAMADSGDRIDLSPIQGVKVDKHSTGGVGDTTTLVLAPLVAAA GVPVAKMSGRGLGHTGGTIDKLEAIPGFNTSLSLEEFIANVNHRQVAVAGQTSNLAPA DKQLYALRDVTATVDSISLIASSIMSKKIAAGAEKIVLDVKVGSGAFMKTYEQAVKLA ESMVEIGRQVNRQTVAVLSNMDQPLGQAVGNALEVKEAVKTLYGEGPEDLIKLCLTLG AQMLKVAGMVETESEGREQLKEVLNSGAALRKFKDLIAAQGGNSSVVDDLTLLPAAKK QIELKAQKEGYIAGIDAEEVGLAAMSLGAGRETKDDIIDPSVGVVLQAKVGDQVNYGD TLATLHINDDANLMAVKEQLQSAYTITDEQSDKSKLIYKIIE" misc_feature complement(1801724..1802932) /locus_tag="Acear_1709" /note="pyrimidine-nucleoside phosphorylase; Region: Y_phosphoryl; TIGR02644" /db_xref="CDD:162960" misc_feature complement(1802738..1802926) /locus_tag="Acear_1709" /note="Glycosyl transferase family, helical bundle domain; Region: Glycos_trans_3N; pfam02885" /db_xref="CDD:145834" misc_feature complement(1801964..1802617) /locus_tag="Acear_1709" /note="Glycosyl transferase family, a/b domain; Region: Glycos_transf_3; pfam00591" /db_xref="CDD:144256" misc_feature complement(1801685..1801906) /locus_tag="Acear_1709" /note="Pyrimidine nucleoside phosphorylase C-terminal domain; Region: PYNP_C; pfam07831" /db_xref="CDD:116444" gene complement(1802935..1803753) /locus_tag="Acear_1710" /db_xref="GeneID:9513767" CDS complement(1802935..1803753) /locus_tag="Acear_1710" /EC_number="2.4.2.1" /note="COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR011268:IPR011270:IPR000845:IPR018099; KEGG: hor:Hore_06960 purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine or other phosphorylase family 1; SPTR: B8CVY4 Purine nucleoside phosphorylase I, inosine and guanosine-specific; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family" /codon_start=1 /transl_table=11 /product="purine nucleoside phosphorylase I, inosine and guanosine-specific" /protein_id="YP_003828280.1" /db_xref="GI:302392460" /db_xref="GeneID:9513767" /translation="MELLKVEETVEYLADLIDIKPEIALILGSGLGELADEIKEATSI PYSEIPNFPVSTVKGHAGQLVSGRLRRKKVIAMQGRFHYYEGYDMAEITFPVRVMELL GADKLIITNSAGGVNRNYNVGDLMIINDHINFMGTNPLVGPNEEEFGPRFLDMSQAYS PELITAAERAASKIGVNTRKGVYLATTGPNYETPAEVRCMSRLGADAVGMSTVPEVIV ANHMNCEVLGISCIANMAAGILSEPLDHMEVIETTKRVKEDFINLVTKVLEVIE" misc_feature complement(1802941..1803753) /locus_tag="Acear_1710" /note="Phosphorylase superfamily; Region: PNP_UDP_1; cl00303" /db_xref="CDD:193757" gene complement(1803772..1804947) /locus_tag="Acear_1711" /db_xref="GeneID:9513768" CDS complement(1803772..1804947) /locus_tag="Acear_1711" /EC_number="5.4.2.7" /note="COGs: COG1015 phosphopentomutase; InterProIPR010045:IPR017849:IPR013553:IPR006124:IPR 002114:IPR017850; KEGG: mta:Moth_1500 phosphopentomutase; PFAM: phosphopentomutase domain protein; metalloenzyme domain protein; PRIAM: phosphopentomutase; SPTR: Q2RID0 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: Metalloenzyme superfamily; TIGRFAM: phosphopentomutase" /codon_start=1 /transl_table=11 /product="phosphopentomutase" /protein_id="YP_003828281.1" /db_xref="GI:302392461" /db_xref="GeneID:9513768" /translation="MEIDRVVLIVLDSVGIGALPDAADFGDEGANTLVHVAEAVGDIE LPNLEELGLGNITEISGIAQTDNPAGVFGRMKEASQGKDTITGHWELAGLVSSEPFPT YSEGFPAEVIEEFEEQIGREVLGNKPASGTVIIEELGAEHLETGKPIVYTSADSVFQI AAHEEVIPVEELYEICRTARKILTGPHAVGRVIARPFVGELGSFERTERREDFSLQPP EETLLDSVSQAGKSVMAVGKIEDIFSERGITDSIHSTNNQEAVQDICKFLTRDKEGLI FANLIDFDQEYGHRNDPQGYAQALEKFDASLPEIIELLTEKDILIITADHGCDPIYEG TDHTREYVPLLVSGERIKRDVNLGTRDTFADLAATIADLLEVTKPPAGTSFKEKLFR" misc_feature complement(1803781..1804935) /locus_tag="Acear_1711" /note="Sulfatase; Region: Sulfatase; cl10460" /db_xref="CDD:195965" misc_feature complement(1803793..1804935) /locus_tag="Acear_1711" /note="Metalloenzyme superfamily; Region: Metalloenzyme; pfam01676" /db_xref="CDD:145035" gene complement(1804962..1805606) /locus_tag="Acear_1712" /db_xref="GeneID:9513769" CDS complement(1804962..1805606) /locus_tag="Acear_1712" /note="COGs: COG1300 membrane protein; InterPro IPR014196:IPR002798; KEGG: hor:Hore_06860 sporulation stage II protein M; PFAM: protein of unknown function DUF95 transmembrane; SPTR: B8CVX4 sporulation stage II protein M; TIGRFAM: stage II sporulation protein M; PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M" /codon_start=1 /transl_table=11 /product="stage II sporulation protein M" /protein_id="YP_003828282.1" /db_xref="GI:302392462" /db_xref="GeneID:9513769" /translation="MFSLRQLGTSSIQFMRRNLSILLFLIIIFISGVTFGAIAVKMLS YAEKNQLVNYLANFFQNFKGKLVLQQEILAQEAVFYNLKLILLVWILGISIVGMPIIP ILVFLRGFILGFAVGFLVDELAVKGFLFAVVSIVPHNLFAIPSLIIAGTAGIAFALNL FKSRFKRMPINFAQYFFGYSTLMIILAVILVTAGLIESFLTPILMSFITKTVIY" misc_feature complement(1804992..1805513) /locus_tag="Acear_1712" /note="Integral membrane protein DUF95; Region: DUF95; cl00572" /db_xref="CDD:193875" gene complement(1805673..1806371) /locus_tag="Acear_1713" /db_xref="GeneID:9513770" CDS complement(1805673..1806371) /locus_tag="Acear_1713" /note="KEGG: hor:Hore_06850 hypothetical protein; SPTR: B8CVX3 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828283.1" /db_xref="GI:302392463" /db_xref="GeneID:9513770" /translation="MATLTSNQEWIPTLNITSNASGAAEAARKGDVVMIVDLISMSTT VETALDAGAIDVFGASPDCVSTPVTVNPEKIGYFAGKKALKNDTELIIATEPRLASNE ERKDNIQLALTGIKRAGVEIDTIIPNLGAEIVKLVDFEGKVVLVITDTGGTAYDAAYN HGAPEVITGTVARTFKKSGVMPAKESAQRAIIAAQKFKTGITLVAASSNSHEDVLAAE QIGKLIIEEGFLQI" gene complement(1806409..1806966) /locus_tag="Acear_1714" /db_xref="GeneID:9513771" CDS complement(1806409..1806966) /locus_tag="Acear_1714" /note="InterPro IPR004385:IPR000086:IPR020084:IPR015797; KEGG: amt:Amet_2521 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: A6TR56 NUDIX hydrolase; PFAM: NUDIX domain; TIGRFAM: nudix hydrolase, YffH family" /codon_start=1 /transl_table=11 /product="NUDIX hydrolase" /protein_id="YP_003828284.1" /db_xref="GI:302392464" /db_xref="GeneID:9513771" /translation="MNESLIEEQLNSTSIYEGRIVNLRLDDVKLPDNNKAKREIVEHA GGVAVIPYLFEDKEVILVRQFRNPIEKVLLELPAGLLEINEDPKSCARRELEEETGYR TEDLQQIGSFYTSPGFCNEEIHLYLAQDLSKYSQKTDGDEFIELVKMPLKKIKQKLYT PEISDAKTVIGLQYLLNHLQQNNID" misc_feature complement(1806454..1806840) /locus_tag="Acear_1714" /note="ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as...; Region: ADPRase_NUDT5; cd03424" /db_xref="CDD:72882" misc_feature complement(order(1806454..1806456,1806466..1806468, 1806490..1806495,1806532..1806534,1806538..1806543, 1806601..1806615,1806619..1806621,1806625..1806636, 1806751..1806753,1806766..1806768,1806772..1806774, 1806778..1806780,1806832..1806834,1806838..1806840)) /locus_tag="Acear_1714" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:72882" misc_feature complement(order(1806604..1806606,1806673..1806675, 1806685..1806687,1806727..1806729,1806769..1806771, 1806829..1806831)) /locus_tag="Acear_1714" /note="ADP-ribose binding site [chemical binding]; other site" /db_xref="CDD:72882" misc_feature complement(order(1806541..1806543,1806604..1806606, 1806673..1806675,1806685..1806687,1806727..1806735, 1806769..1806771)) /locus_tag="Acear_1714" /note="active site" /db_xref="CDD:72882" misc_feature complement(order(1806664..1806717,1806721..1806732)) /locus_tag="Acear_1714" /note="nudix motif; other site" /db_xref="CDD:72882" misc_feature complement(order(1806541..1806543,1806673..1806675, 1806685..1806687)) /locus_tag="Acear_1714" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:72882" gene complement(1806985..1808076) /locus_tag="Acear_1715" /db_xref="GeneID:9513772" CDS complement(1806985..1808076) /locus_tag="Acear_1715" /note="KEGG: drm:Dred_1093 hypothetical protein; SPTR: A4J3H5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828285.1" /db_xref="GI:302392465" /db_xref="GeneID:9513772" /translation="MLAIKRGKIAKIIKQRPGLTEVEVELKTGEKRRAINYDDLTGEV SLGDEVILNTTAVELDLGTGGYDFIIYIEGNEPRDLDGLGHIMKLRYSPFQLKTLSVE EEASSWQQEIKNFTSLEGNPVIIGSLHSMLAPTVIVLNRLSNFSLQIAYIMTDAAALP LKLSNTVAELQQKELLDTTITIGHAFGGDLEAVNIYSGLAAAKEVAEADVIIVAMGPG VVGTGTKYGFSGIEQGEIINAVSNLGGIPLAIPRISFSDERKRHYGFSHHTLTVLEEI ALREAVVGVPKLSAANKQKRLNSQLIESNLNYKHDIRYRDGSDVLELISNSDIGVNTM GRDETEDPEFFMTAGITGVLALEELGVSL" misc_feature complement(1807018..1807980) /locus_tag="Acear_1715" /note="Protein of unknown function (DUF3866); Region: DUF3866; pfam12982" /db_xref="CDD:193455" gene complement(1808285..1809412) /locus_tag="Acear_1716" /db_xref="GeneID:9513773" CDS complement(1808285..1809412) /locus_tag="Acear_1716" /note="COGs: COG2195 Di- and tripeptidase; InterPro IPR010162:IPR002933:IPR011650; KEGG: pth:PTH_1208 di- and tripeptidases; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: A5D308 Di-and tripeptidases; TIGRFAM: peptidase T-like protein; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain; TIGRFAM: peptidase T-like protein" /codon_start=1 /transl_table=11 /product="peptidase T-like protein" /protein_id="YP_003828286.1" /db_xref="GI:302392466" /db_xref="GeneID:9513773" /translation="MLDRTEIIDKFMELVQIDSESRFERQMANRMKSELSDLGLEVWE DDTGARIGSYTGNIIGKLEGTNPELPTICLIAHLDTVVPGQNIKPIIKNGVIFSQGQT ILGADDKAGITIILATLEQLIENDYEYGDIEVVFTVCEEAGLLGAKNLDFNRLEADMG IVYDSDGEIGTIITEGPAQEKIRVVVRGRSAHAGKNPQKGINAIKVASIALSNMKLGE IDEETTANIGVIKGGKATNIVPDRVELKGEARSRDEEKLDIQMEHMINIFKRSAEKVG AEVNIENNRLFSAFYLNSNLPVVQAAVSGAKRLGIEPKLVATGGGSDTNIFNNRGIPA INMGIGVKDNHTPKENIRADDLIQTVEYNLAIMEDLKKNYA" misc_feature complement(1808306..1809406) /locus_tag="Acear_1716" /note="M20 Peptidase T like enzymes specifically cleave tripeptides; Region: M20_peptT_like; cd05683" /db_xref="CDD:193558" misc_feature complement(1808309..1809394) /locus_tag="Acear_1716" /note="peptidase T-like protein; Region: PepT-like; TIGR01883" /db_xref="CDD:162579" misc_feature complement(order(1808378..1808380,1808921..1808923, 1808990..1808995,1809092..1809094,1809182..1809184)) /locus_tag="Acear_1716" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193558" misc_feature complement(order(1808378..1808380,1808456..1808458, 1808693..1808695,1808714..1808737,1808741..1808743, 1808756..1808770,1808780..1808782,1808789..1808791, 1808798..1808803,1808807..1808809,1808813..1808815, 1808819..1808824,1808831..1808839,1809164..1809166)) /locus_tag="Acear_1716" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:193558" gene complement(1809538..1810620) /locus_tag="Acear_1717" /db_xref="GeneID:9513774" CDS complement(1809538..1810620) /locus_tag="Acear_1717" /note="COGs: COG3457 amino acid racemase; InterPro IPR001608; KEGG: tpd:Teth39_1046 alanine racemase domain-containing protein; PFAM: alanine racemase domain protein; SPTR: B0K988 Alanine racemase domain protein; PFAM: Alanine racemase, N-terminal domain" /codon_start=1 /transl_table=11 /product="alanine racemase domain protein" /protein_id="YP_003828287.1" /db_xref="GI:302392467" /db_xref="GeneID:9513774" /translation="MSYPRLEVDLDKVTANAERIVNLADSEDIEIIGVTKSVCADIKI AEAMLAGGVDGLADSRIKNLKYMQENLVSPDIPLMLLRIPMISEVDRVVEYADISLNS ELEVIKALDQVAKEMNQKHRIILMVDVGDRREGVMPEDVIDIAAEILDLENIELTGLG TNLACFGGVLPSENNMQLLIDLKNEINNKFGVNIQQISGGNSSSLPRLRNKGLPDEIT QLRVGETILLGSNVIDRSPFPDTYQETFLLAAEVIEVKKKPVQPEGRRGQNAFGERRK ITKTGVRRRAILGIGRQDIKMKGLTPLAEDIEIEEASSDHLIIDVTDYEAGIEVGDIL KFKLNYGALLNAATSQYVDISYISSN" misc_feature complement(1809544..1810620) /locus_tag="Acear_1717" /note="Predicted amino acid racemase [Amino acid transport and metabolism]; Region: COG3457" /db_xref="CDD:33260" misc_feature complement(1809550..1810614) /locus_tag="Acear_1717" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase-like 1; Region: PLPDE_III_AR_like_1; cd06815" /db_xref="CDD:143490" misc_feature complement(order(1809565..1809567,1809742..1809747, 1809754..1809756,1809760..1809762,1809766..1809768, 1809853..1809864,1810216..1810227,1810294..1810296, 1810306..1810308,1810312..1810314,1810357..1810359, 1810414..1810416,1810432..1810437,1810441..1810446, 1810507..1810509,1810513..1810515,1810612..1810614)) /locus_tag="Acear_1717" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143490" misc_feature complement(order(1809745..1809747,1809949..1809960, 1810015..1810020,1810135..1810137,1810222..1810224, 1810243..1810245,1810375..1810377,1810450..1810452, 1810513..1810515,1810519..1810521)) /locus_tag="Acear_1717" /note="active site" /db_xref="CDD:143490" misc_feature complement(order(1809949..1809960,1810015..1810020, 1810135..1810137,1810243..1810245,1810375..1810377, 1810450..1810452,1810513..1810515,1810519..1810521)) /locus_tag="Acear_1717" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143490" misc_feature complement(order(1809949..1809951,1810135..1810137, 1810222..1810224,1810513..1810515)) /locus_tag="Acear_1717" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143490" misc_feature complement(1810513..1810515) /locus_tag="Acear_1717" /note="catalytic residue [active]" /db_xref="CDD:143490" gene complement(1810878..1811522) /locus_tag="Acear_1718" /db_xref="GeneID:9513775" CDS complement(1810878..1811522) /locus_tag="Acear_1718" /note="COGs: COG5012 cobalamin binding protein; InterPro IPR006158:IPR003759:IPR012741; KEGG: mac:MA0529 trimethylamine corrinoid protein; PFAM: cobalamin B12-binding domain protein; methionine synthase B12-binding module cap domain protein; SPTR: C5RI92 Cobalamin B12-binding domain protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, methanosarcina family" /codon_start=1 /transl_table=11 /product="methyltransferase cognate corrinoid protein" /protein_id="YP_003828288.1" /db_xref="GI:302392468" /db_xref="GeneID:9513775" /translation="MSEELFEKAAEAVCDGNVDKAVELAETAVEENIDPLKMIEKGFT VGITEVGDLFDQGEVFLPQLMSCSEAMKAASDILKEAAVEQGKDQEENITVVIGSVAG DVHDIGKGIVKTLLEANGMDVYDLGTEVSVDDFISKAKEVDADVISTSSLLTTTMAEN EKLINTLKEENLREQFDVLVGGAPVTEEWAEEIEADGYGETANQAVKVVYDLVG" misc_feature complement(1810881..1811516) /locus_tag="Acear_1718" /note="Predicted cobalamin binding protein [General function prediction only]; Region: COG5012" /db_xref="CDD:34617" misc_feature complement(1810896..1811495) /locus_tag="Acear_1718" /note="B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or...; Region: corrinoid_protein_B12-BD; cd02070" /db_xref="CDD:30208" misc_feature complement(order(1810908..1810910,1810917..1810919, 1810926..1810928,1810974..1810976,1811061..1811069, 1811073..1811081,1811190..1811192,1811199..1811219)) /locus_tag="Acear_1718" /note="B12 binding site [chemical binding]; other site" /db_xref="CDD:30208" misc_feature complement(1811208..1811210) /locus_tag="Acear_1718" /note="cobalt ligand [ion binding]; other site" /db_xref="CDD:30208" gene complement(1811595..1812983) /locus_tag="Acear_1719" /db_xref="GeneID:9513776" CDS complement(1811595..1812983) /locus_tag="Acear_1719" /note="Contains pyrrolysine; InterPro IPR008031; KEGG: dae:Dtox_0025 monomethylamine methyltransferase MtmB; PFAM: Monomethylamine methyltransferase MtmB; SPTR: P58866 Monomethylamine methyltransferase mtmB2; PFAM: Monomethylamine methyltransferase MtmB" /codon_start=1 /transl_except=(pos:complement(1812375..1812377),aa:Pyl) /transl_table=11 /product="monomethylamine:corrinoid methyltransferase" /protein_id="YP_003828289.1" /db_xref="GI:302392469" /db_xref="GeneID:9513776" /translation="MTTKKKVDVFEAYNRALTGPKVDKDEWDYEVIPENAKKMKEKYD IEFEEGEFIPTDEDLIDRLFQAGLEMLVETGAYCKETGRVIEYTEEEVLEAIKAAPKS VTLGEGKDAVELVSRTHKDTEPPIIQGGPTGAPVSEDLFVEMHEAFAQEPLVDTIVNG VFETINGNQPAPGSPWEIKASKSEGKLIRHACKRAGYPGTGLOGCETALSPAGCIAAD HDGGMKESDSHEVSQLNELKIDVGALTFTAHYVLNGDVIMCEQMPIFGGYAGGLEETT IVDVATHLNSFLMTDADYHLDGPVHVRWGITTARETLQVAGHCARAIAANTDLITSNQ YYTLAGPCTEMCLLETAAQSITDTASGRGLLSGVASAKGVETDYTTGMEARFMGEAAY SVAGMELNKVNKILDELVATYENNYNDAPKGKKFQECYDVVTLDPNDEYLEVYEKAAK TLKEIGLDIKDY" misc_feature complement(1811613..1812980) /locus_tag="Acear_1719" /note="Monomethylamine methyltransferase MtmB; Region: MtmB; pfam05369" /db_xref="CDD:114111" gene complement(1813262..1813357) /locus_tag="Acear_1720" /db_xref="GeneID:9513777" CDS complement(1813262..1813357) /locus_tag="Acear_1720" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828290.1" /db_xref="GI:302392470" /db_xref="GeneID:9513777" /translation="MSNSAVMMLLFAIVVLGGGLGICLNIAFKNQ" gene complement(1813360..1814880) /locus_tag="Acear_1721" /db_xref="GeneID:9513778" CDS complement(1813360..1814880) /locus_tag="Acear_1721" /note="COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: drt:Dret_1767 sodium:neurotransmitter symporter; PFAM: sodium:neurotransmitter symporter; SPTR: C1SVV7 transporter; PFAM: Sodium:neurotransmitter symporter family" /codon_start=1 /transl_table=11 /product="sodium:neurotransmitter symporter" /protein_id="YP_003828291.1" /db_xref="GI:302392471" /db_xref="GeneID:9513778" /translation="MSVESSDDGQWGSRIGFILAAIGSAVGLGNIWRFSYMAYDNGGG AFLIPYFFALLTAGIPILIMEFGFGHKMRGSAPFSFAKMGKKWEWLGWWQVLVSFVIA TYYVVVISWSLNYVTFSFNRVWGENPEAYFFGDFLQITDGISQIGGINFSVLISLLIV WGVSYIILYNGIEEGIEKASKIFMPLLALFMIIITIRGVTLPGAMAGINKFLEPDFSA LTDVKVWLAAYGQIFFTLSVGFAIMITYSSYLPEDSDIVNNAFITALSNSAFSFIVGI GVFGILGYMAAQTGEPISKVVTSGIGLAFVAFPKAINMLPAFRSLFGVIFFLALAIAG FSSCVSILEAVIAAVRDKFDIGRKAAVNYVCSVGAVISLLYTTGAGLYFLDIVDHFIN QFGIALAGLVECIIIGWFYKVSIIREHANRLSDFAIGSWWDIMIRVITPICLGVAFVQ NTMKELAAPYGGYPMNAILKYGWSVAAGVIVLGIIMSLRPWKGKKSDELISNREVM" misc_feature complement(1813519..1814868) /locus_tag="Acear_1721" /note="Sodium:neurotransmitter symporter family; Region: SNF; cl11976" /db_xref="CDD:196291" gene complement(1815107..1815922) /locus_tag="Acear_1722" /db_xref="GeneID:9513779" CDS complement(1815107..1815922) /locus_tag="Acear_1722" /note="KEGG: amt:Amet_2519 hypothetical protein; SPTR: A6TR54 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828292.1" /db_xref="GI:302392472" /db_xref="GeneID:9513779" /translation="MAILTGITLILTYLGYPLIKRLLIRYSLVTENFSGCEIPVGYGL LLGVNAVIILLVGKGLRIYPGEVVTSFVFLIMVAGATGLADDYLGYEQSSGFSGHLRK LWQEYQVTTGFLKAALIGIFTFLIVNRVIMDNFVVRLVNFSLVVLMTNFINLLDLRPG RALKGFIIITFSSLLATDILFIKLLLPLLVMVIILLPIDLRAEAMLGDVGSNLLGACL GLGLLFSLGFIYKVMLVVGLVLIHIYTEKSSLTELIARNRVLNYIDQLGRGRI" gene complement(1815922..1816599) /locus_tag="Acear_1723" /db_xref="GeneID:9513780" CDS complement(1815922..1816599) /locus_tag="Acear_1723" /note="COGs: COG0463 glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: tte:TTE1307 cell wall biosynthesis glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Q8RAB6 glycosyltransferases involved in cell wall biogenesis; PFAM: glycosyl transferase family 2" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_003828293.1" /db_xref="GI:302392473" /db_xref="GeneID:9513780" /translation="MSEVTVLVPAYNEADKIKFTIRALDQVPKIDEIIAINDGSTDNT AEIVSNKTPAKLIDLETNQGKGAALNKGLEAAQGKIISLVDADLEETAVELEKLLEPV VHQQVDMSIADFPSPEKKGGFGLVTNLAQLGLKFFTGEEFGSPLSGQRVLTREVIDYL NGFKSGFGVEVGLTIEVINGGFEVAEIPVEMSHRETGRDWKGFRHRGRQFKDVLKVLL DQLRSGR" misc_feature complement(1816090..1816584) /locus_tag="Acear_1723" /note="DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; Region: DPM_DPG-synthase_like; cd04179" /db_xref="CDD:133022" misc_feature complement(order(1816339..1816341,1816567..1816569, 1816573..1816575)) /locus_tag="Acear_1723" /note="Ligand binding site [chemical binding]; other site" /db_xref="CDD:133022" misc_feature complement(order(1816339..1816344,1816486..1816488)) /locus_tag="Acear_1723" /note="Putative Catalytic site [active]" /db_xref="CDD:133022" misc_feature complement(1816339..1816347) /locus_tag="Acear_1723" /note="DXD motif; other site" /db_xref="CDD:133022" gene complement(1816592..1817200) /locus_tag="Acear_1724" /db_xref="GeneID:9513781" CDS complement(1816592..1817200) /locus_tag="Acear_1724" /note="KEGG: drm:Dred_1089 hypothetical protein; SPTR: A4J3H1 Putative uncharacterized protein; PFAM: protein of unknown function (DUF3186)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828294.1" /db_xref="GI:302392474" /db_xref="GeneID:9513781" /translation="MVIDLRYQIVTTVIIFLTLGIGILIGSSMVGKQGIVTEQQKMIN RLENDFDHLRRKNNRFQQKIISLQEKIEDNQQFQQELFPVVVDGIINDETVLVVHNKS NLGDKVDKLNSIFKLAGSKRITIKPIDSLPKKVTLDSYNYLIYLGSKEKFADKELQKE YNNNFKKIKYLSDDILGSKQKLMKYFLKLSGNLSQTGSVQIE" misc_feature complement(<1816820..1817194) /locus_tag="Acear_1724" /note="Protein of unknown function (DUF3186); Region: DUF3186; pfam11382" /db_xref="CDD:151822" gene complement(1817222..1818340) /locus_tag="Acear_1725" /db_xref="GeneID:9513782" CDS complement(1817222..1818340) /locus_tag="Acear_1725" /note="COGs: COG4825 Uncharacterized membrane-anchored protein; InterPro IPR007371; KEGG: tte:TTE1305 hypothetical protein; PFAM: Thiamin pyrophosphokinase catalytic region; SPTR: C6P837 Thiamin pyrophosphokinase catalytic region; PFAM: Thiamine pyrophosphokinase C terminal; Thiamin pyrophosphokinase, catalytic domain" /codon_start=1 /transl_table=11 /product="Thiamin pyrophosphokinase catalytic region" /protein_id="YP_003828295.1" /db_xref="GI:302392475" /db_xref="GeneID:9513782" /translation="MEINAEVKLGKKTKKLVKQLTGREIAVIDHTDIDQLAATSLIDT GIKAVVNASSSITGKYPNLGPEELLTNNIFIIDEVGTEIFQKLEDGDKIRIVDNEIFK AGSKIAEGRVLDRATLEEKLKISRENLEEELDKFVENTLEYAKEEKDLILDLHPPEIE TQIEGEHVLIVVRGQDYKDDLEAITSYIREIEPVLIGVDGGADALLEFGFEPDIIIGD MDSISDYALQLGAELIVHAYPNGDAPGMERIHDLNLTAQKFPAPGTSEDIAMQLAYEK GSELITAVGTHSNMIDFLEKGRAGMSSTFLTRLKIGARLVDAKGVNKLYNNRLRPKHI LQIIAAAMIPVIIILVVAPPMQQMMRLLLIKLRFSLGF" misc_feature complement(1817360..1818274) /locus_tag="Acear_1725" /note="Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown]; Region: COG4825" /db_xref="CDD:34434" gene 1818598..1819239 /locus_tag="Acear_1726" /db_xref="GeneID:9513783" CDS 1818598..1819239 /locus_tag="Acear_1726" /note="COGs: COG2344 AT-rich DNA-binding protein; InterPro IPR011991:IPR016040:IPR009718:IPR003781; KEGG: ctc:CTC02428 redox-sensing transcriptional repressor REX; PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; SPTR: C0GJN8 CoA-binding domain protein; PFAM: CoA binding domain; Putative DNA-binding protein N-terminus" /codon_start=1 /transl_table=11 /product="CoA-binding domain protein" /protein_id="YP_003828296.1" /db_xref="GI:302392476" /db_xref="GeneID:9513783" /translation="MPKETKEVSESVIKRMSFYSQILEKLKTKDVEFISIQQLEEKFG LNVIRFRKDLACFGEFNMQELVMNQWEVDKLLSKLKKILGLNKKQKAILIGGGRIGTA LTDFNQKEKNSEVKIKSVFDNDPEKIGTKIGELEIKPVSKVPQVVKEINPEIGIITVS NQTAQQVADLLIENGIKVLLNFASIHVEVPEEVYLQNIDLTLEMRKLMYYSNS" misc_feature 1818601..1819236 /locus_tag="Acear_1726" /note="redox-sensing transcriptional repressor Rex; Provisional; Region: PRK05472" /db_xref="CDD:180107" misc_feature 1818619..1818759 /locus_tag="Acear_1726" /note="Putative DNA-binding protein N-terminus; Region: Put_DNA-bind_N; pfam06971" /db_xref="CDD:115616" misc_feature 1818871..1819146 /locus_tag="Acear_1726" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene complement(1819328..1820116) /locus_tag="Acear_1727" /db_xref="GeneID:9513784" CDS complement(1819328..1820116) /locus_tag="Acear_1727" /note="COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR001789:IPR012052:IPR011991:IPR014879:IPR 016032:IPR011006; KEGG: hor:Hore_06590 response regulator receiver protein; PFAM: sporulation initiation factor Spo0A ; response regulator receiver; SMART: response regulator receiver; SPTR: B8D2I9 Response regulator receiver protein; TIGRFAM: sporulation transcription factor Spo0A; PFAM: sporulation initiation factor Spo0A C terminal; Response regulator receiver domain; TIGRFAM: sporulation transcription factor Spo0A" /codon_start=1 /transl_table=11 /product="response regulator receiver protein" /protein_id="YP_003828297.1" /db_xref="GI:302392477" /db_xref="GeneID:9513784" /translation="MEKDNTKVLLVDDNKEFCQLVREFIEEQENMEVIGVGNNGLEAL DLIEEKDPDVVILDIIMPHLDGIGVLEELKEDGKINDLKVIMLTAFGQEELTQKVVEL GANYYILKPFDLEKLVDRIEQLMTPVGQQGGVTATANATTDKSQNLDVRITDIMHEIG VPAHIKGYLYLREAIGMVVEEVELLGAITKELYPLVARKFNTTPSRVERAIRHAIEVA WERGNTEAINKLFGHSVSTESGKPTNSQFIAKIADKLRLEIKAS" misc_feature complement(1819331..1820107) /locus_tag="Acear_1727" /note="sporulation transcription factor Spo0A; Region: spore_0_A; TIGR02875" /db_xref="CDD:131922" misc_feature complement(1819742..1820092) /locus_tag="Acear_1727" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(1819784..1819789,1819796..1819798, 1819853..1819855,1819919..1819921,1819943..1819945, 1820078..1820083)) /locus_tag="Acear_1727" /note="active site" /db_xref="CDD:29071" misc_feature complement(1819943..1819945) /locus_tag="Acear_1727" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(1819919..1819927,1819931..1819936)) /locus_tag="Acear_1727" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(1819781..1819789) /locus_tag="Acear_1727" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(1819349..1819666) /locus_tag="Acear_1727" /note="Sporulation initiation factor Spo0A C terminal; Region: Spo0A_C; pfam08769" /db_xref="CDD:149736" gene complement(1820247..1821596) /locus_tag="Acear_1728" /db_xref="GeneID:9513785" CDS complement(1820247..1821596) /locus_tag="Acear_1728" /EC_number="3.4.21.116" /note="InterPro IPR014219:IPR008763:IPR001478; KEGG: hor:Hore_06580 peptidase S55 sporulation stage IV protein B; PFAM: peptidase S55 SpoIVB; PRIAM: SpoIVB peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: B8D2I8 peptidase S55 sporulation stage IV protein B; TIGRFAM: stage IV sporulation protein B; PFAM: SpoIVB peptidase S55; TIGRFAM: stage IV sporulation protein B" /codon_start=1 /transl_table=11 /product="stage IV sporulation protein B" /protein_id="YP_003828298.1" /db_xref="GI:302392478" /db_xref="GeneID:9513785" /translation="MGRLCRSVIKSVKQRWKRSSLYLGISLLVLTLLIPMFLTTIGFP EELQIVKGHKQLLEIDFPFPVYIRVDKSEELKINGQQVNDNYFKVDLSNPLAIKSAVL GEIDLEFNLFGVIPIRQATVNVIPQVKVYPGGQSVGIILESKGVLVVKKSYVLGTDNE KYYLANSAGIKVGDRILAVNGQRVEGKKSLSKLINYYGQRQEVLKLKIRRNGSLITKN LEPKKNHSGRYMIGLYIDDGATGVGTMTFYDPQTKMYGALGHMITEPNSRSRMPISEG KIVKADISGIQRGNDTLPGEKLGTFFDNQQIMGKINKNDRFGIYGKLNHTVSNKFFPD PIPVATALQVKRGPAKIYTVVEDDEIEEFQIQIVEVMKQQSPHEKGLVVKITDHELLN KTGGIIQGMSGSPIVQNGKLVGAVTHVFINDSTKGYGVLAEWMIEKAGLIQDKMAQN" misc_feature complement(1820271..1821431) /locus_tag="Acear_1728" /note="stage IV sporulation protein B; Region: spore_IV_B; TIGR02860" /db_xref="CDD:163044" misc_feature complement(1820934..>1821104) /locus_tag="Acear_1728" /note="PDZ domain of bacterial and plant zinc metalloprotases, presumably membrane-associated or integral membrane proteases, which may be involved in signalling and regulatory mechanisms. May be responsible for substrate recognition and/or binding, as most...; Region: PDZ_metalloprotease; cd00989" /db_xref="CDD:29046" misc_feature complement(1820286..1820933) /locus_tag="Acear_1728" /note="SpoIVB peptidase S55; Region: Peptidase_S55; pfam05580" /db_xref="CDD:114310" gene complement(1821676..1823421) /locus_tag="Acear_1729" /db_xref="GeneID:9513786" CDS complement(1821676..1823421) /locus_tag="Acear_1729" /note="COGs: COG0497 ATPase involved in DNA repair; InterPro IPR004604:IPR003395:IPR019269; KEGG: hor:Hore_06570 DNA repair protein RecN; PFAM: SMC domain protein; Biogenesis of lysosome-related organelles complex-1, subunit 2; SPTR: B8D2I7 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN" /codon_start=1 /transl_table=11 /product="DNA repair protein RecN" /protein_id="YP_003828299.1" /db_xref="GI:302392479" /db_xref="GeneID:9513786" /translation="MLLNLSIYNFALIEELQIDFTGNLNIITGETGAGKSIIVKALQM LLGGRASTDYIRSGQKKAVIEANCSIKNDQPVKNKLEQLGIDYDPTEGIILTREITHN GNNCSRINGRIVTLKVTRELSQYLIEIHSQHEHQALFKSQKQLTLLDDFGGKEISELL KKTEMIYQRLKKKQEEYTALNQNEKEKARRIDLLQFQLDEIEEADLTAGEDEELLAEK RRLSNIEEIAEITGRIYAGLYESGFEETVIIDQLNQFVKELNYISSFDDELESIIEML EEAVYKLQEAAYQLDDYQHQLEFNPQRLNKIEQRLQLINKLKRKYGDNVNEILDYQAE IQSELDDLLTSEARLEELEEEIVKLKEDYFTVASKLSGLRCKVAEDFAEKIISELEDL AMEKSKFELEVTPMIDSFQEVELNRITSYGIDQVEFLISPNPGEDLKPLAEIASGGEL SRTMLAIKKIIAENDEVQTLIFDEVDTGIGGRVADLVAEKLAIIAQNQQVISITHLPQ IASMGDTHYHISKNMTDGQTKTEVVQLEDKKRIEELSRMLAGSQLTDATLEHADEMIK LARKKKETILESKIE" misc_feature complement(1821712..1823421) /locus_tag="Acear_1729" /note="ATPase involved in DNA repair [DNA replication, recombination, and repair]; Region: RecN; COG0497" /db_xref="CDD:30843" misc_feature complement(<1822933..1823418) /locus_tag="Acear_1729" /note="RecN ATPase involved in DNA repair; ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides...; Region: ABC_RecN; cd03241" /db_xref="CDD:73000" misc_feature complement(1823314..1823337) /locus_tag="Acear_1729" /note="Walker A/P-loop; other site" /db_xref="CDD:73000" misc_feature complement(order(1822999..1823001,1823311..1823319, 1823323..1823328)) /locus_tag="Acear_1729" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73000" misc_feature complement(1822999..1823010) /locus_tag="Acear_1729" /note="Q-loop/lid; other site" /db_xref="CDD:73000" misc_feature complement(1821772..>1822158) /locus_tag="Acear_1729" /note="RecN ATPase involved in DNA repair; ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides...; Region: ABC_RecN; cd03241" /db_xref="CDD:73000" misc_feature complement(1822060..1822089) /locus_tag="Acear_1729" /note="ABC transporter signature motif; other site" /db_xref="CDD:73000" misc_feature complement(1822000..1822017) /locus_tag="Acear_1729" /note="Walker B; other site" /db_xref="CDD:73000" misc_feature complement(1821982..1821993) /locus_tag="Acear_1729" /note="D-loop; other site" /db_xref="CDD:73000" misc_feature complement(1821901..1821921) /locus_tag="Acear_1729" /note="H-loop/switch region; other site" /db_xref="CDD:73000" gene complement(1823437..1823889) /locus_tag="Acear_1730" /db_xref="GeneID:9513787" CDS complement(1823437..1823889) /locus_tag="Acear_1730" /note="COGs: COG1438 Arginine repressor; InterPro IPR001669:IPR011991; KEGG: hor:Hore_06560 arginine repressor, ArgR; PFAM: arginine repressor; SPTR: B8D2I6 Arginine repressor; TIGRFAM: arginine repressor; PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor" /codon_start=1 /transl_table=11 /product="ArgR family transcriptional regulator" /protein_id="YP_003828300.1" /db_xref="GI:302392480" /db_xref="GeneID:9513787" /translation="MKSKRHLKIMKYIQQEEISTQQELAARLREDGIAVTQATVSRDI KELGLIKVPTKDKGYKYALPPEREHSDLQGRMERMFKDSVVDFDHSENLIVINTLPGT ANGVASLIDNADWEGVLSTLAGDDTILIIVKPKEMVEEILEKLHQLTI" misc_feature complement(1823455..1823889) /locus_tag="Acear_1730" /note="arginine repressor; Provisional; Region: PRK04280" /db_xref="CDD:179807" misc_feature complement(1823686..1823886) /locus_tag="Acear_1730" /note="Arginine repressor, DNA binding domain; Region: Arg_repressor; pfam01316" /db_xref="CDD:110329" misc_feature complement(1823446..1823655) /locus_tag="Acear_1730" /note="Arginine repressor, C-terminal domain; Region: Arg_repressor_C; pfam02863" /db_xref="CDD:145816" gene complement(1823902..1824759) /locus_tag="Acear_1731" /db_xref="GeneID:9513788" CDS complement(1823902..1824759) /locus_tag="Acear_1731" /EC_number="2.7.1.23" /note="COGs: COG0061 sugar kinase; InterPro IPR017437:IPR002504:IPR016064; KEGG: nth:Nther_1692 ATP-NAD/AcoX kinase; PFAM: ATP-NAD/AcoX kinase; PRIAM: NAD(+) kinase; SPTR: B2A524 Probable inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD kinase" /codon_start=1 /transl_table=11 /product="NAD(+) kinase" /protein_id="YP_003828301.1" /db_xref="GI:302392481" /db_xref="GeneID:9513788" /translation="MEKIGLIPNPTKEQAIETVKGIIDWLEKRGIEYLVEEESAGLVG EQNKGSSYQEMAVEVDLVIVFGGDGTFLNTARHFAAVEMPILGVNLGGLGFLTDIELS KLGSALEDLIAGKFEIEERMMLEAKVIREGEKINQVVAVNDVVITKGSFSRIIELKTY IEGEYVTTYPADGLIVASPTGSTAYSLSAGGPIVNPKLKSLVVTPICPHTLSSRSIVT AGDEVVEVEVKADHEDIMLTVDGQTGLKLASGDKIKIKHSDLVTKLVKLEDYNFYKIL KNRIQFSDF" misc_feature complement(1823929..1824750) /locus_tag="Acear_1731" /note="Diacylglycerol kinase catalytic domain; Region: DAGK_cat; cl01255" /db_xref="CDD:194084" misc_feature complement(1823920..1824702) /locus_tag="Acear_1731" /note="inorganic polyphosphate/ATP-NAD kinase; Provisional; Region: ppnK; PRK02231" /db_xref="CDD:167337" gene complement(1824791..1825603) /locus_tag="Acear_1732" /db_xref="GeneID:9513789" CDS complement(1824791..1825603) /locus_tag="Acear_1732" /note="COGs: COG1189 rRNA methylase; InterPro IPR002942:IPR004538:IPR002877; KEGG: hor:Hore_06540 hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein; SPTR: C1I685 Hemolysin A; TIGRFAM: hemolysin A; PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein" /codon_start=1 /transl_table=11 /product="hemolysin A" /protein_id="YP_003828302.1" /db_xref="GI:302392482" /db_xref="GeneID:9513789" /translation="MVKERLDKLVTQRELYPSRSKAKRAIMAGLVLVDGELVDKAGTQ VDVEADIEIKGKVHPYVSRGGLKLEKSLKVFDVDVEDKVIIDIGASTGGFTDCALQHG ASKVYAVDVGYGQLAWKLRQDERVINRERTNARYLTPNDFDTEFELATIDVAFISLTK ILPAVIELLIPNGDILALIKPQFEAGPENVDNNGVVKDFEIHYQVIERIINFAQDRNL SLVDLSFSPITGAQGHNVEYLAYFSLDKSKAINSDCSKKIQRVIDQAEQELL" misc_feature complement(1824866..1825597) /locus_tag="Acear_1732" /note="Predicted rRNA methylase [Translation, ribosomal structure and biogenesis]; Region: COG1189" /db_xref="CDD:31382" misc_feature complement(1825424..1825594) /locus_tag="Acear_1732" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cd00165" /db_xref="CDD:29105" misc_feature complement(order(1825466..1825468,1825472..1825495, 1825514..1825516,1825520..1825525,1825532..1825537, 1825541..1825546,1825550..1825555,1825589..1825591)) /locus_tag="Acear_1732" /note="RNA binding surface [nucleotide binding]; other site" /db_xref="CDD:29105" misc_feature complement(1824887..1825426) /locus_tag="Acear_1732" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene complement(1825596..1827488) /locus_tag="Acear_1733" /db_xref="GeneID:9513790" CDS complement(1825596..1827488) /locus_tag="Acear_1733" /EC_number="2.2.1.7" /note="COGs: COG1154 Deoxyxylulose-5-phosphate synthase; InterProIPR005477:IPR015941:IPR005475:IPR005476:IPR 009014; KEGG: hor:Hore_06530 deoxyxylulose-5-phosphate synthase; PFAM: transketolase central region; transketolase domain protein; SPTR: B8D2I3 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase, thiamine diphosphate binding domain; transketolase, C-terminal domain; transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose-5-phosphate synthase" /protein_id="YP_003828303.1" /db_xref="GI:302392483" /db_xref="GeneID:9513790" /translation="MGEYLQDITSPRELDNLSTKELDEVAEEIRRKIIVTLSKTGGHL ASSLGVVELTLALHTVFKTPKDKIIWDVGHQAYAHKLVTGRYDEFSSLRQYQGLSGFP KRSESRHDALNTGHSSTSISAALGMACSRDIKGQDNDVAALIGDGALTGGMAFEALNH AGHLGTDLTVVLNDNEMSIAENVGAVSSYLTKLRTEPMLHRIKEDIEELVNKIPAIGS RVIKTVDRVKEGLKYLVVSGVLFEEMGFSYLGPVDGHDIKEMQKSLEYAKNLDGPALV HAITTKGKGYTPAENAPKNFHGISAFKIKTGESKRERELPTYSTIFSRTLVDLAEDDK DIVAITAAMPSGTGLDKFKTEFPDRFYDVGIAEQHAVTFGTGLALEGSKPVITLYSTF LQRAYDQLIHDVALNEAPVTLAIDRGGLVGRDGETHQGVFDYAYLRGIPGFTVMAPKN ENELQHMLKTAINYPGPVSLRYPRGMGAGVPLDSKLEELEIGKAEVLREGSDLAILAI GSMVMPALEASKELAKQGIEATVVNSRFVKPLDEDLILDVAKEHDQILTIEEHVLQGG FGSAVLELLADSNVTDIGIERMGIPDEFVQQGSQDILLDHYGLNKAGIKEKVSKLVDN GVDRSG" misc_feature complement(1825623..1827476) /locus_tag="Acear_1733" /note="1-deoxy-D-xylulose-5-phosphate synthase; Provisional; Region: PRK05444" /db_xref="CDD:180086" misc_feature complement(1826631..1827368) /locus_tag="Acear_1733" /note="TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis. Terpeniods are plant natural products with important pharmaceutical activity. DXS...; Region: TPP_DXS; cd02007" /db_xref="CDD:73294" misc_feature complement(order(1826958..1826960,1826964..1826966, 1827045..1827056,1827138..1827140)) /locus_tag="Acear_1733" /note="TPP-binding site; other site" /db_xref="CDD:73294" misc_feature complement(1826067..1826528) /locus_tag="Acear_1733" /note="Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins; Region: TPP_PYR_DXS_TK_like; cd07033" /db_xref="CDD:132916" misc_feature complement(order(1826094..1826096,1826157..1826162, 1826208..1826210,1826217..1826219,1826292..1826297, 1826304..1826306,1826358..1826366,1826370..1826375, 1826382..1826399,1826403..1826405,1826412..1826414, 1826463..1826465,1826481..1826483,1826487..1826489)) /locus_tag="Acear_1733" /note="PYR/PP interface [polypeptide binding]; other site" /db_xref="CDD:132916" misc_feature complement(order(1826166..1826168,1826172..1826177, 1826181..1826186,1826211..1826213,1826217..1826219, 1826298..1826300,1826304..1826309,1826388..1826396, 1826403..1826405,1826463..1826465)) /locus_tag="Acear_1733" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132916" misc_feature complement(order(1826304..1826306,1826313..1826315, 1826388..1826390,1826394..1826396)) /locus_tag="Acear_1733" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132916" misc_feature complement(1825647..1826015) /locus_tag="Acear_1733" /note="Transketolase, C-terminal domain; Region: Transketolase_C; pfam02780" /db_xref="CDD:145764" gene complement(1827538..1828425) /locus_tag="Acear_1734" /db_xref="GeneID:9513791" CDS complement(1827538..1828425) /locus_tag="Acear_1734" /EC_number="2.5.1.10" /note="COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR008949:IPR000092; KEGG: drm:Dred_1076 polyprenyl synthetase; PFAM: polyprenyl synthetase; SPTR: A4J3F8 Farnesyl-diphosphate synthase; PFAM: polyprenyl synthetase" /codon_start=1 /transl_table=11 /product="farnesyl-diphosphate synthase" /protein_id="YP_003828304.1" /db_xref="GI:302392484" /db_xref="GeneID:9513791" /translation="MEINDFLVAKAEAVNKALDDYLPAEDKKPAKLHQSMRYSTLMGG KRLRPVLTLIVANSLFGVEEERIMPAAAAVELVHNYSLIHDDLPCMDDDDYRRGELAN HKVFGDAIAVLSGDALLTYAFELLTKLEGDFTAEQILKVSKEVAQGAGFRGMVGGQAA DMLAEGKAVEDIDLEFIHRYKTGALLQAAVRTGAILGGADKEELAALTIYAENIGLSF QIIDDILDIVGDEEKLGKEVGSDEGQDKATFPSVYGLEESRAMAQKKVQAAKEAIERF EEDAELLIQLADYIIERDY" misc_feature complement(1827541..1828425) /locus_tag="Acear_1734" /note="Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]; Region: IspA; COG0142" /db_xref="CDD:30491" misc_feature complement(1827547..1828344) /locus_tag="Acear_1734" /note="Trans-Isoprenyl Diphosphate Synthases, head-to-tail; Region: Trans_IPPS_HT; cd00685" /db_xref="CDD:173833" misc_feature complement(order(1827688..1827690,1827703..1827705, 1827718..1827720,1827748..1827750,1827757..1827762, 1827871..1827873,1827880..1827885,1827943..1827945, 1827952..1827954,1828135..1828140,1828153..1828158, 1828168..1828176,1828180..1828188,1828195..1828197)) /locus_tag="Acear_1734" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:173833" misc_feature complement(order(1828153..1828158,1828165..1828188)) /locus_tag="Acear_1734" /note="chain length determination region; other site" /db_xref="CDD:173833" misc_feature complement(order(1827688..1827690,1827703..1827705, 1827718..1827720,1827748..1827750,1827757..1827762, 1827883..1827885,1827943..1827945,1828135..1828140, 1828153..1828155,1828168..1828173)) /locus_tag="Acear_1734" /note="substrate-Mg2+ binding site; other site" /db_xref="CDD:173833" misc_feature complement(order(1827757..1827762,1827883..1827885, 1828135..1828140,1828153..1828155,1828168..1828173)) /locus_tag="Acear_1734" /note="catalytic residues [active]" /db_xref="CDD:173833" misc_feature complement(order(1827883..1827885,1827943..1827945, 1828135..1828140,1828153..1828155,1828168..1828173)) /locus_tag="Acear_1734" /note="aspartate-rich region 1; other site" /db_xref="CDD:173833" misc_feature complement(order(1827682..1827696,1827703..1827720, 1827736..1827741,1828105..1828149)) /locus_tag="Acear_1734" /note="active site lid residues [active]" /db_xref="CDD:173833" misc_feature complement(order(1827688..1827690,1827703..1827705, 1827718..1827720,1827748..1827750,1827757..1827762)) /locus_tag="Acear_1734" /note="aspartate-rich region 2; other site" /db_xref="CDD:173833" gene complement(1828425..1828676) /locus_tag="Acear_1735" /db_xref="GeneID:9513792" CDS complement(1828425..1828676) /locus_tag="Acear_1735" /note="InterPro IPR003761; KEGG: noc:Noc_2036 exonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; SPTR: Q3J9K0 Exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII, small subunit" /protein_id="YP_003828305.1" /db_xref="GI:302392485" /db_xref="GeneID:9513792" /translation="MADIDTEELSFGTALDQLEKIVNKLEGEELSLEDSLAEFERGIK LSKFCSQTLEEAESKVEIIKDEAGELQIGSYDLEQKGAD" misc_feature complement(1828470..1828676) /locus_tag="Acear_1735" /note="Exonuclease VII small subunit; Region: Exonuc_VII_S; cl00750" /db_xref="CDD:193926" gene complement(1828858..1830078) /locus_tag="Acear_1736" /db_xref="GeneID:9513793" CDS complement(1828858..1830078) /locus_tag="Acear_1736" /EC_number="3.1.11.6" /note="COGs: COG1570 Exonuclease VII large subunit; InterPro IPR003753:IPR004365:IPR020579; KEGG: hor:Hore_06490 exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: Exodeoxyribonuclease VII; SPTR: B8D2H9 Exodeoxyribonuclease 7 large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII, large subunit" /protein_id="YP_003828306.1" /db_xref="GI:302392486" /db_xref="GeneID:9513793" /translation="MTVTELTKYIKRRLETDDLLNNLLITGEISNFHHHSSGHMYFTL KDDNSRLKSVMFRSANQNLKFQPEDGMEVIASGYVSLYESRGQYQLYVQDLQPEGIGA LHIAFEQLKEELQKKGLFAVEHKQELPQFPQKVGVITSPTGAAIRDILSVIQRRFRGV SVLVAPATVQGDKAASTLVGALEILNQQSDVDVIIIGRGGGSIEDLWPFNEEEVARAI FSSQTPVVSAVGHETDYTISDFVADVRAPTPSAAGELVVSNQKEVNRYVKGLTDSLVQ NIEQKLSDCRNQLVNLMERRVFLQPKRQLKDRKQRIDELEERLINLMERRLNLAQERL QSKAGKLDTLSPLNILSRGYSYCRKRDKKESLSSVSEIKPGDKLEIFLSDGKLEIEVM NIKKGKVNIDQFTK" misc_feature complement(1828903..1830078) /locus_tag="Acear_1736" /note="exodeoxyribonuclease VII large subunit; Reviewed; Region: xseA; PRK00286" /db_xref="CDD:178962" misc_feature complement(1829782..1830015) /locus_tag="Acear_1736" /note="ExoVII_LU_OBF: A subfamily of OB folds corresponding to the N-terminal OB-fold domain of Escherichia coli exodeoxyribonuclease VII (ExoVII) large subunit. E. coli ExoVII is composed of two non-identical subunits. E. coli ExoVII is a single-strand-...; Region: ExoVII_LU_OBF; cd04489" /db_xref="CDD:72961" misc_feature complement(order(1829791..1829793,1829851..1829853, 1829857..1829859,1829863..1829865,1830007..1830009)) /locus_tag="Acear_1736" /note="generic binding surface II; other site" /db_xref="CDD:72961" misc_feature complement(order(1829806..1829814,1829839..1829847, 1829866..1829868,1829911..1829913,1829917..1829925, 1829941..1829943,1829947..1829958,1829986..1829994)) /locus_tag="Acear_1736" /note="generic binding surface I; other site" /db_xref="CDD:72961" gene complement(1830115..1830975) /locus_tag="Acear_1737" /db_xref="GeneID:9513794" CDS complement(1830115..1830975) /locus_tag="Acear_1737" /EC_number="1.5.1.5" /EC_number="3.5.4.9" /note="COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase; InterPro IPR000672:IPR016040:IPR020630:IPR020631; KEGG: nam:NAMH_0757 FolD bifunctional protein; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: methylenetetrahydrofolate dehydrogenase (NADP(+)); SPTR: B9L952 Bifunctional protein folD; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain" /codon_start=1 /transl_table=11 /product="5,10-methylenetetrahydrofolate dehydrogenase (NADP+) methenyltetrahydrofolate cyclohydrolase" /protein_id="YP_003828307.1" /db_xref="GI:302392487" /db_xref="GeneID:9513794" /translation="MSEEAMILDGSAKSKEIQDEISAEVEELKEEEGVVPKLSIIFVG DNPASASYIKLQQRICNKVGIESEVVDLPEEISQEDLLDELDKLNNDDEVNGILIQMP LPDHIDDDKVIRAINPDKDIDAFHPYNIGELVIDGDAYVPCTPEGVMELFDRYDIELR GKDVTVVGHSNIVGKPMALLLLNENATVSVCHIDTEDTASYTKESDIVIVAAGVPNLI TADMVKEGAIVIDVGINEVDGEIVGDVDFEKVKEKAGAITPVPGGAGPMTIAMLLKDT LKSYKEMLNK" misc_feature complement(1830118..1830960) /locus_tag="Acear_1737" /note="5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]; Region: FolD; COG0190" /db_xref="CDD:30539" misc_feature complement(1830607..1830960) /locus_tag="Acear_1737" /note="Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Region: THF_DHG_CYH; pfam00763" /db_xref="CDD:189708" misc_feature complement(1830133..1830624) /locus_tag="Acear_1737" /note="NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase; Region: NAD_bind_m-THF_DH_Cyclohyd; cd01080" /db_xref="CDD:133448" misc_feature complement(order(1830364..1830366,1830391..1830396, 1830400..1830402,1830406..1830423,1830430..1830432, 1830439..1830444,1830469..1830471,1830487..1830489, 1830493..1830495,1830583..1830585,1830592..1830597)) /locus_tag="Acear_1737" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:133448" misc_feature complement(order(1830172..1830174,1830181..1830183, 1830274..1830276,1830280..1830282,1830325..1830327, 1830334..1830336,1830340..1830342,1830397..1830402, 1830466..1830471,1830544..1830546)) /locus_tag="Acear_1737" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:133448" misc_feature complement(order(1830169..1830171,1830190..1830195)) /locus_tag="Acear_1737" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133448" gene complement(1831095..1832045) /locus_tag="Acear_1738" /db_xref="GeneID:9513795" CDS complement(1831095..1832045) /locus_tag="Acear_1738" /note="COGs: COG0533 Metal-dependent protease with possible chaperone activity; InterPro IPR017861:IPR000905; KEGG: mta:Moth_1520 O-sialoglycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease; SPTR: Q2RIB0 O-sialoglycoprotein endopeptidase; PFAM: Glycoprotease family; TIGRFAM: metalloendopeptidase, , glycoprotease family" /codon_start=1 /transl_table=11 /product="peptidase M22 glycoprotease" /protein_id="YP_003828308.1" /db_xref="GI:302392488" /db_xref="GeneID:9513795" /translation="MGLIMGIDTSNYTTSAALLNQKGELVTEARKLLEVNKGQRGLRQ SEAVFKHVEQFPKVIKELGVKALEEQIYKIAVSTKPRPTDKSYMPVFRVGEGHAHSLA EVLGIPLKEVSHQAGHLQAGIWSAGGPQTREFLAVHISGGTTEIMRVASLDGSFEIER LGSASDLHAGQFIDRVGVELGLDFPAGPQLEKLAQKGEKGAVIIPSAVDRYDISFSGP NSAAMRAVADNKRPADIALAVQSCIAKALEKVLRLALDEQGLDQILIVGGVAANLYLR QRLKDKLEHPAVGGRLFFAAPEFSSDNAVGVAALGLRDAK" misc_feature complement(1831098..1832039) /locus_tag="Acear_1738" /note="Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]; Region: QRI7; COG0533" /db_xref="CDD:30879" misc_feature complement(<1831707..1832039) /locus_tag="Acear_1738" /note="Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]; Region: COG1214; cl14000" /db_xref="CDD:189252" gene complement(1832049..1832465) /locus_tag="Acear_1739" /db_xref="GeneID:9513796" CDS complement(1832049..1832465) /locus_tag="Acear_1739" /note="COGs: COG0781 transcription termination factor; InterPro IPR011605:IPR006027; KEGG: oih:OB1881 transcription antitermination protein NusB; PFAM: NusB/RsmB/TIM44; SPTR: Q8EQ42 N utilization substance protein B homolog; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB" /codon_start=1 /transl_table=11 /product="NusB antitermination factor" /protein_id="YP_003828309.1" /db_xref="GI:302392489" /db_xref="GeneID:9513796" /translation="MTDRYSRHEARKIAVQTLYQIDINDEGLEKNLEMLTNRIEGLEL EDTFLEEIITGTYQNLSEIDKELNESAEGWKVSRMGKVDRNILRLAIYEILYVDDIPI EVSIDEAVELAKEFIADKSPKFINGVLGRVVSKQEE" misc_feature complement(1832061..1832447) /locus_tag="Acear_1739" /note="Transcription termination factor NusB (N protein-Utilization Substance B). NusB plays a key role in the regulation of ribosomal RNA biosynthesis in eubacteria by modulating the efficiency of transcriptional antitermination. NusB along with other Nus...; Region: Terminator_NusB; cd00619" /db_xref="CDD:29565" misc_feature complement(order(1832433..1832435,1832445..1832447)) /locus_tag="Acear_1739" /note="putative RNA binding site [nucleotide binding]; other site" /db_xref="CDD:29565" gene complement(1832532..1832762) /locus_tag="Acear_1740" /db_xref="GeneID:9513797" CDS complement(1832532..1832762) /locus_tag="Acear_1740" /note="InterPro IPR018730; KEGG: ate:Athe_1000 hypothetical protein; PFAM: protein of unknown function DUF2273; SPTR: A1HQ68 Putative uncharacterized protein; PFAM: Small integral membrane protein (DUF2273)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828310.1" /db_xref="GI:302392490" /db_xref="GeneID:9513797" /translation="MKNDLFDKALEVFYLYKGRIIGSFLGLLFSLFFIYFGFILTVFI FICIFIGYQVGSRYDREDNLRDIIDDILPPNR" gene complement(1832776..1833312) /locus_tag="Acear_1741" /db_xref="GeneID:9513798" CDS complement(1832776..1833312) /locus_tag="Acear_1741" /note="KEGG: nth:Nther_1704 hypothetical protein; SPTR: B2A536 Putative uncharacterized protein; PFAM: protein of unknown function (DUF322)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828311.1" /db_xref="GI:302392491" /db_xref="GeneID:9513798" /translation="MQLLDRIIIFVFTILLIFISLIMIGSAVELIPLTYISAFINQYY GQAVIGVIGAVLLVVAVRILYPLFRRKDKSRNTIVRENSLGEIRLSLSAIDALVNEAV NQTRGIKEVESKLKVGEEGLNIFLEVVVTPDINIPEISEELQESIKEYLKRTTGVVVG QIEVLVDKVAQDSNLRVE" misc_feature complement(1832815..>1833006) /locus_tag="Acear_1741" /note="Protein of unknown function (DUF322); Region: DUF322; cl00574" /db_xref="CDD:153866" gene complement(1833383..1833817) /locus_tag="Acear_1742" /db_xref="GeneID:9513799" CDS complement(1833383..1833817) /locus_tag="Acear_1742" /note="COGs: COG1302 conserved hypothetical protein; InterPro IPR005531; KEGG: hor:Hore_06270 hypothetical protein; PFAM: protein of unknown function DUF322; SPTR: A1HQ70 Putative uncharacterized protein; PFAM: protein of unknown function (DUF322)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828312.1" /db_xref="GI:302392492" /db_xref="GeneID:9513799" /translation="MNNMDDMEAMKKVENDVGTVRIANEVVGIIAGLAATEVEGVAGM SGGFAGGIAEILGKKNLSKGVKVEVGEKEAAIDLYVITEYGIRIPDVAWEIQDNVKQA IEDMTGLSVVEVNVHVQGVDFGDEQEEEAEEEEKEETTHRVR" misc_feature complement(1833455..1833772) /locus_tag="Acear_1742" /note="Protein of unknown function (DUF322); Region: DUF322; cl00574" /db_xref="CDD:153866" gene complement(1833882..1835234) /locus_tag="Acear_1743" /db_xref="GeneID:9513800" CDS complement(1833882..1835234) /locus_tag="Acear_1743" /EC_number="6.3.4.14" /EC_number="6.4.1.2" /note="COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterProIPR011761:IPR011764:IPR004549:IPR013817:IPR 013816:IPR005481:IPR005479:IPR005482:IPR016185:IPR011054; KEGG: hor:Hore_06260 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SPTR: B8D2F6 Acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase" /codon_start=1 /transl_table=11 /product="biotin carboxylase ;acetyl-CoA carboxylase carboxyltransferase subunit alpha" /protein_id="YP_003828313.1" /db_xref="GI:302392493" /db_xref="GeneID:9513800" /translation="MFDKILVANRGEIALRIIRACKELGIKTVAVYSEADKETLHVKH ADETYCLGPPSSNKSYLNIPSIISVADMAGVDAIHPGYGFLSENAYFAEVCETCGIKF IGPSAESMEQMGDKSIARETMIEAGVPVVPGTEGGLSGLEEAVETADEIGYPVIVKAA FGGGGRGMRTAQNEDDLKQAIQTASSEAEAAFGNAEVYLEKYIEEPRHIEFQIIADEH GNVVHLGERDCSIQRRHQKVIEEAPSPALDVDLREEMGQAAVKAAEAVNYANAGTVEF LLDKHNNYYFIEMNTRIQVEHPVTELVTGIDLIKEQIRIASGKELGYTQEDIEINGAA IECRINAEDPDKDFRPSPGQLEEYIIPGGFGVRIDSCAYPGYLIPPHYDSMVAKLITH GNDREEARRRMLRALDEFEISGIKTTIPFHKLVLNNAFFQQGEFYTNFIQRRIIGELE " misc_feature complement(1833885..1835234) /locus_tag="Acear_1743" /note="acetyl-CoA carboxylase biotin carboxylase subunit; Validated; Region: PRK08591" /db_xref="CDD:181492" misc_feature complement(1834908..1835231) /locus_tag="Acear_1743" /note="Carbamoyl-phosphate synthase L chain, N-terminal domain; Region: CPSase_L_chain; pfam00289" /db_xref="CDD:189488" misc_feature complement(1834269..1834892) /locus_tag="Acear_1743" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl03087" /db_xref="CDD:194530" misc_feature complement(1833912..1834229) /locus_tag="Acear_1743" /note="Biotin carboxylase C-terminal domain; Region: Biotin_carb_C; cl08365" /db_xref="CDD:195719" gene complement(1835283..1837148) /locus_tag="Acear_1744" /db_xref="GeneID:9513801" CDS complement(1835283..1837148) /locus_tag="Acear_1744" /EC_number="6.4.1.1" /note="COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterProIPR001249:IPR000089:IPR000891:IPR013785:IPR 003379:IPR001882:IPR011053; KEGG: chy:CHY_1999 pyruvate carboxylase subunit B; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein; PRIAM: Pyruvate carboxylase; SPTR: Q3AAL6 Oxaloacetate decarboxylase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; oxaloacetate decarboxylase alpha subunit" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase, biotin carboxyl carrier protein" /protein_id="YP_003828314.1" /db_xref="GI:302392494" /db_xref="GeneID:9513801" /translation="MTKKVGVTDTTLRDAHQSLWATRMRTEDMLPIVSKLDEVGYHSM EVWGGATFDVCMRYLKEDPWERLRLLNEYIQNTPLQMLLRAQNVVGYKHYPDDVVRKF VQKAEENGIDIFRIFDALNDVRNMRTALEAVKETEAHAQATVVYTVSPVHTIEHYVET AVTLQEMGADSICIKDMAGLLKPYRAYDLVTAIKEEVDLPIQIHSHYIGGLAISTYLK AIEAGADVVDTATASLAFGSSQPPVETITAIFSETEYDNKFDLDSLFDIDRYFEQVRR ERGFERGVTRITDMQTFSHQVPGGMISNLVSQLEDQNSLDRIHDVLNEIPKVREELGY PPLVTPTSQVVGVQAVFNVLLEERYKVIPDEVKSYIRGYYGRPPAEIDPEIKELAIGD EEPITCRPADLLDPMLDNIKDEVEHYAEKEEDYLSYALFPQVGLKFLKERKQEKDIFG VDDEDKEVKEEEEEMNLGEIKELVKILNETDVSEINLESDDTKVNIKKGGTVVKEAAD TAEVQQEAQTQNNDTQTVKTDESTASDQEVEAEEGETIEAPMVGTFYRAPAPDADPFV EVGDVVEEGETLCIIEAMKLMNEIEADDKVKILDILVEDAEPIEYGQPLFLVEKL" misc_feature complement(1835289..1837145) /locus_tag="Acear_1744" /note="pyruvate carboxylase subunit B; Validated; Region: PRK09282" /db_xref="CDD:181754" misc_feature complement(1836318..1837130) /locus_tag="Acear_1744" /note="Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain; Region: DRE_TIM_PC_TC_5S; cd07937" /db_xref="CDD:163675" misc_feature complement(order(1836429..1836431,1836531..1836533, 1836537..1836539,1836624..1836626,1836714..1836716, 1836897..1836899,1836903..1836905,1837002..1837004, 1837014..1837016,1837098..1837100,1837107..1837112)) /locus_tag="Acear_1744" /note="active site" /db_xref="CDD:163675" misc_feature complement(order(1837014..1837016,1837107..1837112)) /locus_tag="Acear_1744" /note="catalytic residues [active]" /db_xref="CDD:163675" misc_feature complement(order(1836531..1836533,1836537..1836539, 1836624..1836626,1837107..1837109)) /locus_tag="Acear_1744" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163675" misc_feature complement(order(1836354..1836356,1836396..1836398, 1836414..1836416,1836444..1836446,1836450..1836455, 1836495..1836500,1836510..1836512,1836516..1836518, 1836522..1836524,1836597..1836599,1836603..1836605)) /locus_tag="Acear_1744" /note="homodimer binding site [polypeptide binding]; other site" /db_xref="CDD:163675" misc_feature complement(1835805..1836272) /locus_tag="Acear_1744" /note="Conserved carboxylase domain; Region: PYC_OADA; pfam02436" /db_xref="CDD:145532" misc_feature complement(1835295..1835507) /locus_tag="Acear_1744" /note="The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase...; Region: biotinyl_domain; cd06850" /db_xref="CDD:133459" misc_feature complement(order(1835370..1835372,1835391..1835399, 1835424..1835426)) /locus_tag="Acear_1744" /note="carboxyltransferase (CT) interaction site; other site" /db_xref="CDD:133459" misc_feature complement(1835394..1835396) /locus_tag="Acear_1744" /note="biotinylation site [posttranslational modification]; other site" /db_xref="CDD:133459" gene complement(1837327..1837929) /locus_tag="Acear_1745" /db_xref="GeneID:9513802" CDS complement(1837327..1837929) /locus_tag="Acear_1745" /note="KEGG: hor:Hore_06240 hypothetical protein; SPTR: B8D2F4 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828315.1" /db_xref="GI:302392495" /db_xref="GeneID:9513802" /translation="MSIFIRKKLIWLLVLMLWVGMVSAIVVYNVDDSASISKEEKPQA KEVSNMEIETPEELDKKLQKVEQKAINVAKTDQDTKKKDENFFIEYRLERDKIRSEQV NLLREMINNPNSNKELKNKAQNRLLEITNNLEKEMEIESLIRARDYQDAISFLHQNSV DVIIASNSGLEKKDVAKIGDIVAKTTGLEIEDVTIIEKKY" misc_feature complement(1837342..1837827) /locus_tag="Acear_1745" /note="SpoIIIAH-like protein; Region: SpoIIIAH; pfam12685" /db_xref="CDD:193161" gene complement(1837938..1838552) /locus_tag="Acear_1746" /db_xref="GeneID:9513803" CDS complement(1837938..1838552) /locus_tag="Acear_1746" /note="KEGG: hor:Hore_06230 sporulation stage III protein AG; SPTR: B8D2F3 sporulation stage III protein AG; TIGRFAM: stage III sporulation protein AG" /codon_start=1 /transl_table=11 /product="sporulation stage III protein AG" /protein_id="YP_003828316.1" /db_xref="GI:302392496" /db_xref="GeneID:9513803" /translation="MANNGWKERIKQLFAGMVNENNRKLVWRITILGVIGFLLLVSGK LIDSNPSQMISQNESETEAKQTISSQQLDTEAEMERKLAKILSDISGVGRVRVDITLD TGSEYEYARDYNTSQKTTDQQDSNGGQQKTEQVDKQRELVIVRTDTGKEEAVIKKETK PKVRGVMVVAEGAEVSQVKAELISAVKVGLGVRAHRIVVLPMKR" misc_feature complement(1837944..1838468) /locus_tag="Acear_1746" /note="stage III sporulation protein AG; Region: spore_III_AG; TIGR02830" /db_xref="CDD:163038" gene complement(1838573..1839190) /locus_tag="Acear_1747" /db_xref="GeneID:9513804" CDS complement(1838573..1839190) /locus_tag="Acear_1747" /note="InterPro IPR014245; KEGG: dae:Dtox_2606 hypothetical protein; PFAM: sporulation stage III protein AF; SPTR: C1THT5 Stage III sporulation protein AF (spore_III_AF); TIGRFAM: stage III sporulation protein AF; PFAM: Stage III sporulation protein AF (spore_III_AF); TIGRFAM: stage III sporulation protein AF" /codon_start=1 /transl_table=11 /product="stage III sporulation protein AF" /protein_id="YP_003828317.1" /db_xref="GI:302392497" /db_xref="GeneID:9513804" /translation="MIAYLVAWIRNIVVILLLTSFIELLLPESELEKYTRVVLGLFIV IAILNPILNLFNNNYNFQQITDLLTVEEESQMNKSEIMEQGKELRNISQQKARSDYKR QLSKQIAALLSFNNELPKSSVKVKLRPDNKIEKIIIKLQQNENRDQPEIEQEIKVDDI EINNESQQESREANQKQSLEVNQQIKKQLANFYNLSHEQIIIKRD" misc_feature complement(1838579..1839112) /locus_tag="Acear_1747" /note="Stage III sporulation protein AF (Spore_III_AF); Region: Spore_III_AF; cl09803" /db_xref="CDD:158705" gene complement(1839196..1840407) /locus_tag="Acear_1748" /db_xref="GeneID:9513805" CDS complement(1839196..1840407) /locus_tag="Acear_1748" /note="InterPro IPR014194; KEGG: hor:Hore_06210 sporulation stage III protein AE; PFAM: sporulation stage III protein AE; SPTR: B8D2F1 sporulation stage III protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE" /codon_start=1 /transl_table=11 /product="stage III sporulation protein AE" /protein_id="YP_003828318.1" /db_xref="GI:302392498" /db_xref="GeneID:9513805" /translation="MNNRKKIILIFIVLILISQILILPLQAESQGEIRENLENKKEEL VKQQLNRLDISRIKKQIEKLNRDAGEYLPKLTLDDMISLFTNGEMDFKFKGIITGLLE YLFKEIVVNLELLGKLIILAVISAVLKSFQNSFAEENISRLVNSIIYLVLVIVALNSF KVALNIGQETIDNMVSFMQALLPTLLTLLVAVGNVTSASLFQPITFLTVNLLSVLIKN IIFPLLLLGVILSIVNNISDNFDVSGLADLIREVNISLLGSFLTIFIGVMVVQGAAGA VGDGITIRTAKYLSGAFIPVIGGMFADALDMIIGGSLLIKNAIGILGVIIIFLFCAFS VIKIAALIFVYKFARAVIQPISDSKIVACLNDLSSSLILVFASVLSVAMMFFIMVTII VGVANMSVMLR" misc_feature complement(1839211..1840194) /locus_tag="Acear_1748" /note="Stage III sporulation protein AE (spore_III_AE); Region: Spore_III_AE; cl09771" /db_xref="CDD:164148" gene complement(1840441..1840827) /locus_tag="Acear_1749" /db_xref="GeneID:9513806" CDS complement(1840441..1840827) /locus_tag="Acear_1749" /note="InterPro IPR014211; KEGG: cth:Cthe_0842 stage III sporulation protein AD; PFAM: sporulation stage III protein AD; SPTR: A3DDP8 Stage III sporulation protein AD; TIGRFAM: stage III sporulation protein AD; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD" /codon_start=1 /transl_table=11 /product="stage III sporulation protein AD" /protein_id="YP_003828319.1" /db_xref="GI:302392499" /db_xref="GeneID:9513806" /translation="MEIIKIVGLGLVATILAILIRGEEPEIALQLSLVVGILIFALML SKVVAIIDLLRDLALKAEIDLVYLDTILKVIGIAYIAEFGAAISRDAGEGIIASKIEF AGKVLIMVLGIPIMLAIMESIMQLMP" misc_feature complement(1840447..1840749) /locus_tag="Acear_1749" /note="Stage III sporulation protein AC/AD protein family; Region: SpoIIIAC; cl05961" /db_xref="CDD:156954" gene complement(1840842..1841036) /locus_tag="Acear_1750" /db_xref="GeneID:9513807" CDS complement(1840842..1841036) /locus_tag="Acear_1750" /note="InterPro IPR009570; KEGG: hor:Hore_06190 stage III sporulation AC family protein; PFAM: Stage III sporulation AC family protein; SPTR: B8D2E9 Stage III sporulation AC family protein; TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC" /codon_start=1 /transl_table=11 /product="stage III sporulation protein AC" /protein_id="YP_003828320.1" /db_xref="GI:302392500" /db_xref="GeneID:9513807" /translation="MNVDLVFKIAGLGILISIFNIVLEQANKEEQAEMLTLVGVIIVL MMVIRLINDLFTNVRQIFGF" misc_feature complement(1840845..1841036) /locus_tag="Acear_1750" /note="Stage III sporulation protein AC/AD protein family; Region: SpoIIIAC; cl05961" /db_xref="CDD:156954" gene complement(1841060..1841578) /locus_tag="Acear_1751" /db_xref="GeneID:9513808" CDS complement(1841060..1841578) /locus_tag="Acear_1751" /note="InterPro IPR014198; KEGG: dae:Dtox_2610 stage III sporulation protein SpoAB; PFAM: sporulation stage III protein AB; SPTR: A5D344 Hypothetical membrane protein; TIGRFAM: stage III sporulation protein AB; PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB" /codon_start=1 /transl_table=11 /product="stage III sporulation protein AB" /protein_id="YP_003828321.1" /db_xref="GI:302392501" /db_xref="GeneID:9513808" /translation="MIKLAGSLLIVGATSWLGFLKADQLIQRTKQLQQLQIAFQALEA EIMYAAVPLPEAMGKVGNKVDSPAADFFLVSKEKLKSEIGITARQAWQEAVEEVFPNT ALMIEDKEFLLNFGNNLGNSDRTHQEKNLQLVQKELKQAKEASVTAKKSGVKKWRYFG ILGGLLIVILLY" misc_feature complement(1841105..1841572) /locus_tag="Acear_1751" /note="Stage III sporulation protein AB (spore_III_AB); Region: Spore_III_AB; cl08022" /db_xref="CDD:186736" gene complement(1841575..1842567) /locus_tag="Acear_1752" /db_xref="GeneID:9513809" CDS complement(1841575..1842567) /locus_tag="Acear_1752" /note="COGs: COG3854 conserved hypothetical protein; InterPro IPR014217; KEGG: tpd:Teth39_1088 AAA ATPase; SPTR: B0K9D0 AAA ATPase; TIGRFAM: stage III sporulation protein AA; TIGRFAM: stage III sporulation protein AA" /codon_start=1 /transl_table=11 /product="stage III sporulation protein AA" /protein_id="YP_003828322.1" /db_xref="GI:302392502" /db_xref="GeneID:9513809" /translation="MIERIKEEIFPVLATTLRRILRQVDTDILSKTEEIRLRTDQPLI LNLHHKEAIITKNGRITKDFKRAYYTTKQDIEETMNLMTQHSLYALEEELQQGYLTLA GGHRVGFVGQVVSDLDEIELIKNFSGLNIRISQEIIGAADEVIGEVISNDQSQSIYNT LIISPPQCGKTTLLRDLIRQLSTGLPEQNFSGLKVGVVDERGELGGSYQGVVQNQLGI RTDLLANCPKSQGMILLIRAMSPEVIVTDEIGSRQDVQAICEAVNAGVKIVTSVHGRD LKEIKQRPNLEKLLGQNFFKKFIILSRRQGPGTVEEIIKAEDSKSRLTEKRKIL" misc_feature complement(1841629..1842471) /locus_tag="Acear_1752" /note="stage III sporulation protein AA; Region: spore_III_AA; TIGR02858" /db_xref="CDD:163043" gene complement(1842921..1843481) /locus_tag="Acear_1753" /db_xref="GeneID:9513810" CDS complement(1842921..1843481) /locus_tag="Acear_1753" /note="COGs: COG0231 translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); InterProIPR020599:IPR011768:IPR014722:IPR012340:IPR 013185:IPR001059:IPR015365:IPR013852:IPR016027:IPR008991; KEGG: mta:Moth_1538 elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW domain protein; Elongation factor P/YeiP protein; SPTR: Q2RI92 Elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P" /codon_start=1 /transl_table=11 /product="translation elongation factor P (EF-P)" /protein_id="YP_003828323.1" /db_xref="GI:302392503" /db_xref="GeneID:9513810" /translation="MISTNDFSTGITIELDGELYKVIDYEHTKPGKGGAYIQTELKNV DTGSTTTKRFKSGEKVKQAYIETRTYQYLYRDGDKYVFMDNDTYEQVDLTKDKLGAAT KYLKENQEIKLEVYEEKIIGVQVPNSVELVVASAPPAIKGDTVSGGTKQVELETGAKV KVPLFIEEGDILKIDTRSGEYIERVN" misc_feature complement(1842924..1843481) /locus_tag="Acear_1753" /note="elongation factor P; Validated; Region: PRK00529" /db_xref="CDD:179058" misc_feature complement(1843302..1843475) /locus_tag="Acear_1753" /note="Elongation factor P (EF-P) KOW-like domain; Region: EFP_N; pfam08207" /db_xref="CDD:191966" misc_feature complement(1843104..1843286) /locus_tag="Acear_1753" /note="S1_EF-P_repeat_1: Translation elongation factor P (EF-P), S1-like RNA-binding domain, repeat 1. EF-P stimulates the peptidyltransferase activity in the prokaryotic 70S ribosome. EF-P enhances the synthesis of certain dipeptides with N-formylmethionyl-...; Region: S1_EF-P_repeat_1; cd04470" /db_xref="CDD:88435" misc_feature complement(order(1843122..1843127,1843140..1843142, 1843215..1843217)) /locus_tag="Acear_1753" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88435" misc_feature complement(1842930..1843097) /locus_tag="Acear_1753" /note="S1_EF-P_repeat_2: Translation elongation factor P (EF-P), S1-like RNA-binding domain, repeat 1. EF-P stimulates the peptidyltransferase activity in the prokaryotic 70S ribosome. EF-P enhances the synthesis of certain dipeptides with N-formylmethionyl-...; Region: S1_EF-P_repeat_2; cd05794" /db_xref="CDD:88469" misc_feature complement(order(1842939..1842944,1842957..1842959, 1843008..1843010)) /locus_tag="Acear_1753" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88469" gene complement(1843565..1844635) /locus_tag="Acear_1754" /db_xref="GeneID:9513811" CDS complement(1843565..1844635) /locus_tag="Acear_1754" /note="COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994:IPR000587:IPR001131; KEGG: hor:Hore_06140 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: B8D2E4 peptidase M24; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain" /codon_start=1 /transl_table=11 /product="peptidase M24" /protein_id="YP_003828324.1" /db_xref="GI:302392504" /db_xref="GeneID:9513811" /translation="MEERITALREKLTELDLDGIMINNLQNKYYLSGFTGTAGTVIIT DQEAVLITDFRYIEQAENQAIDFKIIEHGNPKIETIREELQRLEVERLGFEAQQESYQ QYQQYQKKLGSLELVPTKDVVKELRIIKDESELNTIQEAVKIADDAFLHITEYIEPEM TEKEVSLELEYFMKQKGASAKAFDFIVASGKRGAMPHGVATDKEIAAGELVTFDLGSV YQQYNSDLTRNIIVGSEPTEKQQEVYETVLEAQLAAIKAIEPGKTGTEIDKVARDVIT KAGYGDNFGHGLGHGVGLEVHEGPRLAQGKDEELRPGMVVTVEPGIYLSGWGGIRIED IVVVTEEGCNVITEAPKELIRV" misc_feature complement(1843574..1844626) /locus_tag="Acear_1754" /note="aminopeptidase; Provisional; Region: PRK09795" /db_xref="CDD:182080" misc_feature complement(1844249..1844626) /locus_tag="Acear_1754" /note="Creatinase/Prolidase N-terminal domain; Region: Creatinase_N; pfam01321" /db_xref="CDD:189940" misc_feature complement(1843607..1844233) /locus_tag="Acear_1754" /note="Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline; Region: APP-like; cd01092" /db_xref="CDD:29977" misc_feature complement(order(1843637..1843639,1843679..1843681, 1843766..1843768,1843961..1843963,1843994..1843996, 1844045..1844047)) /locus_tag="Acear_1754" /note="active site" /db_xref="CDD:29977" gene complement(1844651..1845076) /locus_tag="Acear_1755" /db_xref="GeneID:9513812" CDS complement(1844651..1845076) /locus_tag="Acear_1755" /EC_number="4.2.1.10" /note="COGs: COG0757 3-dehydroquinate dehydratase II; InterPro IPR001874:IPR018509; KEGG: gur:Gura_1823 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II; PRIAM: 3-dehydroquinate dehydratase; SPTR: A5GF08 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II" /codon_start=1 /transl_table=11 /product="3-dehydroquinate dehydratase" /protein_id="YP_003828325.1" /db_xref="GI:302392505" /db_xref="GeneID:9513812" /translation="MYLVLHGPNLNLLGKREPEVYGRLTLADINQQLEELAAELEVEL IIEQLNGEGEIVERIHQALEEEADGILINPAAYTHYSIAIRDALAGVELPTVEVHLSN IHAREEFRQQSVTASVAAGQISGLGIDSYLLGLRALVNL" misc_feature complement(1844654..1845070) /locus_tag="Acear_1755" /note="Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway...; Region: DHQase_II; cd00466" /db_xref="CDD:63885" misc_feature complement(order(1844747..1844749,1844807..1844809, 1844816..1844821,1844828..1844830,1844849..1844851, 1844897..1844899,1844906..1844908,1844915..1844929, 1845044..1845046,1845050..1845052)) /locus_tag="Acear_1755" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:63885" misc_feature complement(order(1844747..1844749,1844774..1844782, 1844819..1844821,1844840..1844842,1844849..1844854, 1844858..1844860,1845014..1845016,1845029..1845031)) /locus_tag="Acear_1755" /note="active site" /db_xref="CDD:63885" misc_feature complement(order(1844657..1844659,1844666..1844668, 1844678..1844680,1844690..1844692,1844699..1844707, 1844711..1844722,1844726..1844731,1844762..1844767, 1844771..1844773)) /locus_tag="Acear_1755" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:63885" gene complement(1845078..1846172) /locus_tag="Acear_1756" /db_xref="GeneID:9513813" CDS complement(1845078..1846172) /locus_tag="Acear_1756" /EC_number="4.2.3.4" /note="COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR016303:IPR016037:IPR002658; KEGG: drm:Dred_1021 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; PRIAM: 3-dehydroquinate synthase; SPTR: A4J3A3 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase" /codon_start=1 /transl_table=11 /product="3-dehydroquinate synthase" /protein_id="YP_003828326.1" /db_xref="GI:302392506" /db_xref="GeneID:9513813" /translation="MEQVGVDLGERSYRIKIGTGLLSSLDQHLAEAGIKTGTKLLVIT DERVKELYGADIEANLQQSNFEFRLTAVPEGETSKSLDRAKELYDEAVDFGLERSSAV VAFGGGVVGDLAGFIAATYMRGIPLVQVPTTLLAQVDSSVGGKVAVNHEAGKNLIGAF YQPEGVIIDLEVLTTLEERDVKSGLAEVIKYGVIWDNNFFNYLQVNSKAIRDLDFEVL TKVIQRSCQIKAEIVGEDEKEKGLRAILNYGHTIGHAVEALAGYGKYRHGEAVAVGMV SAVKLAHKLEMVTETEVQKQQKLISSLGLPTTFDNFKIDNIIAKTRQDKKVQDGQVRY ILPNQIGEVEIVSGIAKDLITEVLEDQQEG" misc_feature complement(1845099..1846139) /locus_tag="Acear_1756" /note="Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis; Region: DHQS; cd08195" /db_xref="CDD:173954" misc_feature complement(1845228..1846133) /locus_tag="Acear_1756" /note="Iron-containing alcohol dehydrogenase; Region: Fe-ADH; pfam00465" /db_xref="CDD:189559" misc_feature complement(order(1845372..1845374,1845411..1845413, 1845423..1845425,1845600..1845602,1845612..1845614, 1845633..1845635,1845657..1845659,1845702..1845704, 1845711..1845713,1845768..1845770,1845774..1845779, 1845828..1845830,1845837..1845839,1845846..1845854, 1846038..1846040)) /locus_tag="Acear_1756" /note="active site" /db_xref="CDD:173954" misc_feature complement(order(1845693..1845710,1845735..1845740, 1845804..1845812,1845816..1845818,1845825..1845827, 1845906..1845911,1845930..1845932)) /locus_tag="Acear_1756" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:173954" misc_feature complement(order(1845372..1845374,1845423..1845425, 1845612..1845614)) /locus_tag="Acear_1756" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173954" gene complement(1846179..1846688) /locus_tag="Acear_1757" /db_xref="GeneID:9513814" CDS complement(1846179..1846688) /locus_tag="Acear_1757" /EC_number="2.7.1.71" /note="COGs: COG0703 shikimate kinase; InterPro IPR000623; KEGG: tte:TTE1275 shikimate kinase; PFAM: shikimate kinase; PRIAM: shikimate kinase; SPTR: Q8RAE8 shikimate kinase; PFAM: shikimate kinase" /codon_start=1 /transl_table=11 /product="shikimate kinase" /protein_id="YP_003828327.1" /db_xref="GI:302392507" /db_xref="GeneID:9513814" /translation="MDNIVLIGFMGTGKSTVGQHLSERLELEFVDSDEVIEERAGREI SSIFAEYGEEYFRDLETEVITDLSRQQRLVISTGGGVVLRQENIEQLRKKGTIILLTA EPEVILDRVKDSDRPLLEVPEPLEKIKEMLADRREYYDITEYKIDTSQMSVAEVVAEI EKIISNEGG" misc_feature complement(1846185..1846688) /locus_tag="Acear_1757" /note="shikimate kinase; Reviewed; Region: aroK; PRK00131" /db_xref="CDD:178887" misc_feature complement(1846224..1846682) /locus_tag="Acear_1757" /note="Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the...; Region: SK; cd00464" /db_xref="CDD:30188" misc_feature complement(order(1846230..1846232,1846341..1846343, 1846359..1846361,1846641..1846658)) /locus_tag="Acear_1757" /note="ADP binding site [chemical binding]; other site" /db_xref="CDD:30188" misc_feature complement(order(1846590..1846592,1846596..1846598, 1846644..1846646)) /locus_tag="Acear_1757" /note="magnesium binding site [ion binding]; other site" /db_xref="CDD:30188" misc_feature complement(order(1846284..1846286,1846449..1846457, 1846509..1846511,1846518..1846520,1846590..1846592)) /locus_tag="Acear_1757" /note="putative shikimate binding site; other site" /db_xref="CDD:30188" gene complement(1846694..1847896) /locus_tag="Acear_1758" /db_xref="GeneID:9513815" CDS complement(1846694..1847896) /locus_tag="Acear_1758" /EC_number="4.2.3.5" /note="COGs: COG0082 Chorismate synthase; InterPro IPR000453:IPR020541; KEGG: hor:Hore_06100 chorismate synthase; PFAM: chorismate synthase; PRIAM: Chorismate synthase; SPTR: B8D2E0 Chorismate synthase; TIGRFAM: chorismate synthase; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase" /codon_start=1 /transl_table=11 /product="chorismate synthase" /protein_id="YP_003828328.1" /db_xref="GI:302392508" /db_xref="GeneID:9513815" /translation="MLRYLTAGESHGKAVTAVIEGLPANLEIEPEDINRELARRQGGY GRGGRMELENDTVDILSGIRANQTLGSPVTFQIKNKDWINWQEIMSPAGDGGYEKEKV VIEKDEKVKEVTPKVTKPRPGHADLAGSLKYDQGDIRNILERASARETAARVAVGAVA KKLLKEFGIKVISHVVQLGPIEAEKQGLSFLEIENQVDNSPVRTLDEQAEEEMIEEIK QAKKAGDSLGGVFEVVTTPLPVGLGSHVQWDRKLDGRLAQALMSIQAIKGVEVGLGFA AADKPGSKVHDEIYYQDGRFQHQSNNAGGIEGGMTNGESLRLKAAMKPIPTLYKPLES VDLETKEEFKASVERSDVTAVPAAGVVGEAVVAIELAKAWLEKFGGDSMAEIKRNYKN YIHSLKER" misc_feature complement(1846844..1847893) /locus_tag="Acear_1758" /note="Chorismase synthase, the enzyme catalyzing the final step of the shikimate pathway; Region: Chorismate_synthase; cd07304" /db_xref="CDD:143612" misc_feature complement(order(1846916..1846918,1846925..1846936, 1846940..1846942,1846961..1846969,1846973..1846981, 1846988..1846990,1847048..1847053,1847063..1847068, 1847072..1847077,1847084..1847098,1847105..1847107, 1847111..1847116,1847120..1847128,1847135..1847140, 1847144..1847146,1847162..1847170,1847174..1847176, 1847207..1847224,1847237..1847239,1847438..1847440, 1847462..1847467,1847498..1847512,1847669..1847671, 1847675..1847677,1847681..1847683,1847687..1847692, 1847711..1847716,1847720..1847725,1847822..1847827, 1847837..1847839,1847843..1847845,1847849..1847851, 1847870..1847890)) /locus_tag="Acear_1758" /note="Tetramer interface [polypeptide binding]; other site" /db_xref="CDD:143612" misc_feature complement(order(1846916..1846924,1846928..1846933, 1847102..1847107,1847444..1847446,1847453..1847464, 1847525..1847530,1847777..1847779,1847864..1847866)) /locus_tag="Acear_1758" /note="Active site [active]" /db_xref="CDD:143612" misc_feature complement(order(1846844..1846846,1846916..1846924, 1846928..1846930,1847102..1847110,1847459..1847461, 1847465..1847467,1847522..1847530)) /locus_tag="Acear_1758" /note="FMN-binding site [chemical binding]; other site" /db_xref="CDD:143612" gene complement(1848012..1849298) /locus_tag="Acear_1759" /db_xref="GeneID:9513816" CDS complement(1848012..1849298) /locus_tag="Acear_1759" /note="COGs: COG1450 type II secretory pathway component PulD; InterProIPR001775:IPR011662:IPR005644:IPR004846:IPR 004845; KEGG: dtu:Dtur_1035 type II and III secretion system protein; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; SPTR: A1HM79 type II and III secretion system protein; PFAM: Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ" /codon_start=1 /transl_table=11 /product="type II and III secretion system protein" /protein_id="YP_003828329.1" /db_xref="GI:302392509" /db_xref="GeneID:9513816" /translation="MNLRYNNPSKVAIIIYLILVIVLLSSAAVAEKMPESDQQIDLNL RDVDLKDAFRALADVSGVNIIADSSVEGKVTVKLKDVSFLKAMNLITKTNSLSYRVLD GVVIVGSSEKLKSNFEKKKTKIFKLENSDPEKVKENLSLLIKNKAIGINERTKSLIVT AYPNKLKEIGNIIEQLDHLQKQVIIEARIEDVSYDKLKDLGINWSFAKNRGDNKGEQI SDTDIENGGSGILEIGDVSMNYTAIIRALKSTDDSTTLANPRIATIDGKEAVINMGQE VPILKSEKDDDGQTSTNISFRDVGTVLKITPRINNNQIRMNIKPEVSEVDHWEGSYPV INTKKVETNIIVKNGETIVIGGLISEKEINQLSKVPLFGDVPIFGELFKSRRTTKEKR ELVIFITPRIIEDNGQADEEEKDFSASIHSKDKKDQ" misc_feature complement(1848087..1849187) /locus_tag="Acear_1759" /note="type IV pilus secretin (or competence protein) PilQ; Region: IV_pilus_PilQ; TIGR02515" /db_xref="CDD:162898" misc_feature complement(1848753..1848935) /locus_tag="Acear_1759" /note="Bacterial type II/III secretion system short domain; Region: Secretin_N; pfam03958" /db_xref="CDD:146539" misc_feature complement(1848087..1848563) /locus_tag="Acear_1759" /note="Bacterial type II and III secretion system protein; Region: Secretin; cl02829" /db_xref="CDD:164025" gene complement(1849302..1849874) /locus_tag="Acear_1760" /db_xref="GeneID:9513817" CDS complement(1849302..1849874) /locus_tag="Acear_1760" /note="KEGG: hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828330.1" /db_xref="GI:302392510" /db_xref="GeneID:9513817" /translation="MQFNNLFSSSFIKTKLVLIFASILLSVGCSGFITYQALDLINTK QDIENFKEEIARIVKVQDIEAGLDEDLQEITNGSNQSNVLFSYNNQSNTNPFRSLLTK KVVDKSVASKQDSSTVDKPEIIKPDITVLGILGNQKVKRAIIRLGSSETEVYIVRVKE EIQELKIKSITDNKVIITKQNRDFSYEFGG" gene complement(1849874..1850443) /locus_tag="Acear_1761" /db_xref="GeneID:9513818" CDS complement(1849874..1850443) /locus_tag="Acear_1761" /note="KEGG: hor:Hore_06070 hypothetical protein; SPTR: C6MRL1 Pilus assembly protein PilO; PFAM: Pilus assembly protein, PilO" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828331.1" /db_xref="GI:302392511" /db_xref="GeneID:9513818" /translation="MIIMEWSNLSSREQKLILIGLIVILSVGYYYYIYQPQVKRLAEV KQQVEQKLNELRVESKVLEKKKELKQKYELLQQQLQEKEGNFLEIGDDSRLIVDLGNL ADQTGVELLSTGPAESIKDDIYIQYPVKVNLEGTYNNIIDFVNKIVELDYLIRIQNLN ISSKLAPTDRIQVEMRIIGYALEQKSGDR" misc_feature complement(1849910..>1850161) /locus_tag="Acear_1761" /note="Pilus assembly protein, PilO; Region: PilO; cl01234" /db_xref="CDD:154281" gene complement(1850421..1850996) /locus_tag="Acear_1762" /db_xref="GeneID:9513819" CDS complement(1850421..1850996) /locus_tag="Acear_1762" /note="InterPro IPR007813; KEGG: dtu:Dtur_1032 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: B8E235 Fimbrial assembly family protein; PFAM: Fimbrial assembly protein (PilN)" /codon_start=1 /transl_table=11 /product="Fimbrial assembly family protein" /protein_id="YP_003828332.1" /db_xref="GI:302392512" /db_xref="GeneID:9513819" /translation="MINLLPSEYKEKRKLNIDKILIGVLIFTLLLIPLSYYIKLSLEI KRAEAKLELIDRELDKLKDKSQGLNKLQKEYQSLKTRLHNRKKIVGEKVDWSAVLREL QQVISDESWIKEFKVVSHQSFKITGYTLNNQQLEIMIEKLKTSSYFNDVSIDSSTQKK LVLNGYEDQNTIHYQISGKLRANVGDNNGME" misc_feature complement(<1850517..1850708) /locus_tag="Acear_1762" /note="Fimbrial assembly protein (PilN); Region: PilN; pfam05137" /db_xref="CDD:191205" gene complement(1850989..1852047) /locus_tag="Acear_1763" /db_xref="GeneID:9513820" CDS complement(1850989..1852047) /locus_tag="Acear_1763" /note="COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883:IPR003494; KEGG: gsu:GSU2032 type IV pilus biogenesis protein PilM; PFAM: cell division protein FtsA; SPTR: Q1K2X0 type IV pilus assembly protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: cell division protein FtsA; type IV pilus assembly protein PilM" /codon_start=1 /transl_table=11 /product="type IV pilus assembly protein PilM" /protein_id="YP_003828333.1" /db_xref="GI:302392513" /db_xref="GeneID:9513820" /translation="MKVLDKLKNKFSSFFNNNIIGLDIGDSLIKLVEVESKQDKIQLN NLAITPTPSEAVEEGKLKDIDALSEQIKSLLEDNEFQVDQAVTAVSGEEVIIRTVEVP NMPEDELDEVIRWEAQEQIPISVDEAILDYEIVTRKPNGGYELMLVAVAKDLIDRYID LFANLGLKLAAIEIEPTAAARVVHQLYPTQTIGLIDIGAGTTDVSIFGNGELIFTRTI RMAGDEITEEIMENYDLSFEEAEEYKRNNNLFEDAKLNVLIRNLTTAIYRSLDYFQVQ YKDYNVDQLVLTGGESKLTGFISHLENEFEVTTEKLDLISSIESKVEGLSRSELLEVM PFLSVGIGLGLREVKGND" misc_feature complement(1851499..1851993) /locus_tag="Acear_1763" /note="Cell division protein FtsA; Region: FtsA; cl11496" /db_xref="CDD:196250" misc_feature complement(1851004..1851987) /locus_tag="Acear_1763" /note="Competence protein A; Region: Competence_A; pfam11104" /db_xref="CDD:192707" misc_feature complement(<1851310..1851474) /locus_tag="Acear_1763" /note="Cell division protein FtsA; Region: FtsA; cl11496" /db_xref="CDD:196250" gene complement(1852061..1853086) /locus_tag="Acear_1764" /db_xref="GeneID:9513821" CDS complement(1852061..1853086) /locus_tag="Acear_1764" /note="KEGG: nth:Nther_2091 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828334.1" /db_xref="GI:302392514" /db_xref="GeneID:9513821" /translation="MCKNEQGSVIFLALLTITVLMTMVTASSYMLNNEIKINTYNIDR VQALYTAEAGIEKVINEINFTITEDELKGKLSDFNIANSTCEYLEIVKDENEFKIIVK GKAENNAKRKIKATIALVNVYSEKPFIYGTDFIINENSESNGNNGEDNSNLSNSGQQV NELDAIDDDVYDDYINDKNVIEKADGYNGDLDLNSGEVVYIKGKGTLNDIEVSYSEGD NLPVVVVDDDLTLDNIHEVNNIVLMIKGNFKYKTTGKGTLKNTYIYSEGNVTFKGHAK EESPGNSDEINGPFTFKGQCVAESNVKFKISTNKKNQTINYLSPRENGVPSDISGIKI TSWQEVN" gene complement(1853101..1853616) /locus_tag="Acear_1765" /db_xref="GeneID:9513822" CDS complement(1853101..1853616) /locus_tag="Acear_1765" /note="InterPro IPR012902:IPR001120; KEGG: dae:Dtox_2703 hypothetical protein; SPTR: C1T857 Prepilin-type N-terminal cleavage/methylation domain-containing protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828335.1" /db_xref="GI:302392515" /db_xref="GeneID:9513822" /translation="MLSGRNQGFTLIEVLIVLAIIGVVSTAISNVLLTGVKVWNFNQQ QVDLQQRGRGIMLRLSPEIRKASQAIIKDGSGTQTNNGVRLTLKDDSGNEYLEYLVED GVLKEKEADWSSHKPITQKIISNSDVFNYIDSSDDCEIAKEDKELIKIKLVLEVEDKT YNLINKVYLRN" misc_feature complement(1853209..1853604) /locus_tag="Acear_1765" /note="Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]; Region: PulG; COG2165" /db_xref="CDD:32348" misc_feature complement(1853533..1853601) /locus_tag="Acear_1765" /note="Prokaryotic N-terminal methylation motif; Region: N_methyl; cl06830" /db_xref="CDD:141948" gene complement(1853626..1854015) /locus_tag="Acear_1766" /db_xref="GeneID:9513823" CDS complement(1853626..1854015) /locus_tag="Acear_1766" /note="KEGG: cno:NT01CX_1599 hypothetical protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828336.1" /db_xref="GI:302392516" /db_xref="GeneID:9513823" /translation="MLFQLHQWEEGMSLIEVMVGITLLFIALVPILGYFVSSTRMVSE TEKKSIALNLAQQKMEKLKSKDFVDLPDSIKNHDKIDIDGDGEDDYPNFNIEVNGDPD DKIKEITVIVHWNDDELVKLETLIAKR" misc_feature complement(<1853824..1853985) /locus_tag="Acear_1766" /note="Tfp pilus assembly protein PilV [Cell motility and secretion / Intracellular trafficking and secretion]; Region: PilV; COG4967" /db_xref="CDD:34574" gene complement(1854036..1854506) /locus_tag="Acear_1767" /db_xref="GeneID:9513824" CDS complement(1854036..1854506) /locus_tag="Acear_1767" /note="InterPro IPR012902:IPR001120; KEGG: dau:Daud_0971 general secretion pathway protein H; SPTR: B1I3D8 General secretion pathway protein H; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828337.1" /db_xref="GI:302392517" /db_xref="GeneID:9513824" /translation="MKGIAERKAGFTLLEVLVVVSIIGVLAGVGAFGIRDVLANYRLK TEVSSIVSMLNKAKQWTVFKQEKYGVKFSTANETYTLFRYSDDKEFETKDSNTGIDIY ESNRIHFLPEGTADYGEVRLKNSNGEKYRIYVYSVTGRISVKAWDEELKNWIDM" misc_feature complement(1854078..1854488) /locus_tag="Acear_1767" /note="Tfp pilus assembly protein FimT [Cell motility and secretion / Intracellular trafficking and secretion]; Region: FimT; COG4970" /db_xref="CDD:34577" misc_feature complement(1854414..1854485) /locus_tag="Acear_1767" /note="Prokaryotic N-terminal methylation motif; Region: N_methyl; cl06830" /db_xref="CDD:141948" gene complement(1854524..1855288) /locus_tag="Acear_1768" /db_xref="GeneID:9513825" CDS complement(1854524..1855288) /locus_tag="Acear_1768" /note="COGs: COG1989 type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627:IPR000045; KEGG: hor:Hore_06010 prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; SPTR: B8D2D1 Prepilin peptidase; PFAM: Bacterial peptidase A24 N-terminal domain; type IV leader peptidase family" /codon_start=1 /transl_table=11 /product="peptidase A24A domain protein" /protein_id="YP_003828338.1" /db_xref="GI:302392518" /db_xref="GeneID:9513825" /translation="MIVNAVIFIFGLIIGSFLNVIIYRLPEDKSIIFPRSRCTSCQTE LGVIDLIPIVSFLLTKGRCRYCGAKISYQYPLVEFLTGIIFLLLFQQYYFSIQFMIYA FLSSLLLTAAVIDLKHQIIPNRITYFGIITGLILSLLFKHITIRSALLGLVIPAGFLL LIAVITKGGLGMGDVKFIAMIGTYLGAKYTLISIFIGSIVGSVIGLALIGLGVKSRKD RVPFGPLLALGNLLMILYGQVIMDWYLSYKFGMLNL" misc_feature complement(1854548..1855234) /locus_tag="Acear_1768" /note="Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]; Region: PulO; COG1989" /db_xref="CDD:32172" misc_feature complement(1855007..1855234) /locus_tag="Acear_1768" /note="Bacterial Peptidase A24 N-terminal domain; Region: DiS_P_DiS; pfam06750" /db_xref="CDD:191601" misc_feature complement(1854716..1854985) /locus_tag="Acear_1768" /note="Type IV leader peptidase family; Region: Peptidase_A24; cl02077" /db_xref="CDD:154734" gene complement(1855327..1857108) /locus_tag="Acear_1769" /db_xref="GeneID:9513826" CDS complement(1855327..1857108) /locus_tag="Acear_1769" /note="InterPro IPR007016; KEGG: dhd:Dhaf_4478 O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: B8FWI1 O-antigen polymerase; PFAM: O-Antigen ligase" /codon_start=1 /transl_table=11 /product="O-antigen polymerase" /protein_id="YP_003828339.1" /db_xref="GI:302392519" /db_xref="GeneID:9513826" /translation="MEYSKEKSHIKYLLPIAFILAVVPLIVYAKKISIDGILKDYWSQ QLDFFSYYKMIAFLIAVLASVISLVVYYYKRRKLKRTYYYLFMEIYGILIIISTIYST SPSVALWGFPDRYEGMFVLLGYLIILFVTINLVEYKPDIRFLLFSLLLSAAVISTIGV FQYFGVDPLTTVFGKEIILPSSLHSIGDNISARFDYAFSTLYNPNYMGSYTGMLLALV LTLYTLTAKKKIRILLGCFSLLIFAGWLASLSRAGMVGGFCSIVFLVILLRRELKKNW KALAVLTLGFMLVFTGMNYAGDGRLVKEVFSFGQEVKIAAGKKTGEFKDITINKDQLT IITKEEKLQINLTEDNSLAFRDGAGKKVDYKLKKDGGIIKLKNGKYQAYKFRLLPDKG LLHFEYGSSEFGKKKVDFKITTKPERGFWIMGFAGKAYKTGQIEKWGFEGRENLGSNR GYIWSRSLPMLKDTILTGYGPDTYGLYFPQYDNVGKLIAFNTTRKIVDKPHNMYLQVG INTGVISLIALLTVFGVYSFSSIKLYWGGRFDNFYKKVGVGIFGAFLAYAIAGLFNDS VISVAPVFWILFGIGISVNMKLKEELV" misc_feature complement(1855549..>1855779) /locus_tag="Acear_1769" /note="O-Antigen ligase; Region: Wzy_C; cl04850" /db_xref="CDD:194980" gene complement(1857815..1858198) /locus_tag="Acear_1770" /db_xref="GeneID:9513827" CDS complement(1857815..1858198) /locus_tag="Acear_1770" /note="COGs: COG4968 Tfp pilus assembly protein PilE; InterPro IPR000983:IPR012902:IPR013545:IPR001120; KEGG: ppd:Ppro_1656 pilin domain-containing protein; PFAM: type II secretion system protein G; SPTR: A1HQ21 Tfp pilus assembly protein PilE-like; PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain" /codon_start=1 /transl_table=11 /product="type II secretion system protein G" /protein_id="YP_003828340.1" /db_xref="GI:302392520" /db_xref="GeneID:9513827" /translation="MFNKWQEKINYFGTGEEGFTLIELMIVISVLGILAGIAIPRFSG VQDKAKIAAVESDLRNIQTGLEMYKAENGSYPTSVSLITEYVEFEGLDNYSFEADSEY DYTISTSVGGVEVTLTPGGISTTDD" misc_feature complement(1858082..1858147) /locus_tag="Acear_1770" /note="Prokaryotic N-terminal methylation motif; Region: N_methyl; cl06830" /db_xref="CDD:141948" misc_feature complement(<1857965..1858069) /locus_tag="Acear_1770" /note="Bacterial type II secretion system protein G; Region: GSPII_G; pfam08334" /db_xref="CDD:192005" gene complement(1858243..1858638) /locus_tag="Acear_1771" /db_xref="GeneID:9513828" CDS complement(1858243..1858638) /locus_tag="Acear_1771" /note="COGs: COG4968 Tfp pilus assembly protein PilE; InterPro IPR000983:IPR012902; KEGG: gme:Gmet_1399 N-terminal methylation; SPTR: A1HQ21 Tfp pilus assembly protein PilE-like; PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain" /codon_start=1 /transl_table=11 /product="Tfp pilus assembly protein PilE" /protein_id="YP_003828341.1" /db_xref="GI:302392521" /db_xref="GeneID:9513828" /translation="MISKLRRRMSFVSEEDGFTLIELMIVIAVLGVLAGIAIPRFSGV TDKADIASAESDLRNLQTAAEMYIAEHSTTPNSITSLSGYIDDAESDDYYNNNYEFND DGNGDYKIETSEEVGGKTVFVTPGGIGTN" misc_feature complement(<1858408..1858590) /locus_tag="Acear_1771" /note="general secretion pathway protein G; Region: typeII_sec_gspG; TIGR01710" /db_xref="CDD:130771" misc_feature complement(1858525..1858590) /locus_tag="Acear_1771" /note="Prokaryotic N-terminal methylation motif; Region: N_methyl; cl06830" /db_xref="CDD:141948" gene complement(1858661..1859872) /locus_tag="Acear_1772" /db_xref="GeneID:9513829" CDS complement(1858661..1859872) /locus_tag="Acear_1772" /note="COGs: COG1459 type II secretory pathway component PulF; InterPro IPR003004:IPR018076:IPR001992; KEGG: hor:Hore_05990 Tfp pilus biogenesis protein PilC; PFAM: type II secretion system F domain; SPTR: B8D2C9 Tfp pilus biogenesis protein PilC; PFAM: Bacterial type II secretion system protein F domain" /codon_start=1 /transl_table=11 /product="type II secretion system F domain protein" /protein_id="YP_003828342.1" /db_xref="GI:302392522" /db_xref="GeneID:9513829" /translation="MTKVFRYKVRDENGEQLEGALEAESREIVIDRLRNRGYYITSIE EEQESSSLGDKLKQFKKVKLKDLALFCRQFATMIDAGVSLVRALDILGDQTGNPKLRE AIRSVQEHVEGGVSLSNALEEEDHVFPRLFISMVEAGETGGILDEVLLEMADHFEKEN EMKQQITSALAYPAVITLVAVGVVVFLVTVILPTFVDIFAGMNIQLPLPTRILLTTSN LISSYWYLFVGAVLVVISFSYYYYQTDRGKRQIDWLLLKLPLFGDLIIKISVARFSRT LGTLISSGVTILEGLEVVSRVVSNQIVAEQLNEARNSISAGESMADPLQQNGLFPQMV IQMIRIGEETGSLDQMLNRVAQFYDQEVEHKVEGMVSLIEPALILILGLVVGSIVVSM MLPMFNMMQGF" misc_feature complement(1858664..1859866) /locus_tag="Acear_1772" /note="Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]; Region: PulF; COG1459" /db_xref="CDD:31648" misc_feature complement(1859357..1859665) /locus_tag="Acear_1772" /note="Bacterial type II secretion system protein F domain; Region: GSPII_F; cl00906" /db_xref="CDD:154078" misc_feature complement(1858745..1859056) /locus_tag="Acear_1772" /note="Bacterial type II secretion system protein F domain; Region: GSPII_F; cl00906" /db_xref="CDD:154078" gene complement(1859903..1860949) /locus_tag="Acear_1773" /db_xref="GeneID:9513830" CDS complement(1859903..1860949) /locus_tag="Acear_1773" /note="COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321:IPR001482:IPR003593; KEGG: aoe:Clos_1637 twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: A1HQ23 Twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT" /codon_start=1 /transl_table=11 /product="twitching motility protein" /protein_id="YP_003828343.1" /db_xref="GI:302392523" /db_xref="GeneID:9513830" /translation="MELDDLLREGIRVGASDIHLTVGIEPTARINGNLRKLCDSKINS DKINGLVAGMLGSNEEEIYKETGEVDFAYHLDNYRFRVNVFKQRGNPAAVLRIIPNEI LSLEELGLPEKLKELALKPRGLFLVTGPTGSGKSTTLASMIDLVNSKMDKHIITLEDP IEYVHQHKRSIINQRAVGKDTDNFANGLRSALRQDPDIILVGEMRDLETISTAITAAE TGHLVLATLHTNNASETIERIINVFPAHQQTQVRTQLALTLEGVLSQQLLPTIDNLDR VVATELMIANSAVRNLIREDKTHQLESVMQTGSDEGMHTMDYSLRDLYLNGKISRKMA LERAVNVETLKKQI" misc_feature complement(1859906..1860949) /locus_tag="Acear_1773" /note="Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]; Region: PilT; COG2805" /db_xref="CDD:32636" misc_feature complement(1859990..1860586) /locus_tag="Acear_1773" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(order(1860542..1860550,1860560..1860565)) /locus_tag="Acear_1773" /note="Walker A motif; other site" /db_xref="CDD:29986" misc_feature complement(order(1860341..1860346,1860473..1860478, 1860482..1860484,1860542..1860550,1860560..1860562)) /locus_tag="Acear_1773" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29986" misc_feature complement(1860344..1860358) /locus_tag="Acear_1773" /note="Walker B motif; other site" /db_xref="CDD:29986" gene complement(1860964..1862661) /locus_tag="Acear_1774" /db_xref="GeneID:9513831" CDS complement(1860964..1862661) /locus_tag="Acear_1774" /note="COGs: COG2804 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831:IPR001482:IPR003593; KEGG: hor:Hore_05970 Tfp pilus assembly protein PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: A1HQ24 General secretory pathway protein E; PFAM: type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB; general secretory pathway protein E" /codon_start=1 /transl_table=11 /product="type II secretion system protein E (GspE)" /protein_id="YP_003828344.1" /db_xref="GI:302392524" /db_xref="GeneID:9513831" /translation="MIKKKRLGDILVDVGFITEEELQEALEQQKGTEKRLGTVLKEMK LVTEQDVMEALEYQLGIPQVNLNKFIIDSEVIKMIPQSLAERHRAIPIKKEDNTLTVA MADPLDVLAIDDIRIKTDCEVIPVIASEDEIQQAIEQYFGSEDIVNEFIEDIDARQIE LDSEEEMEVDRLREMVDEAPVVRLVNNIINEGVKLRASDIHIEPQGDEVQVRYRVDGI LRNEMDIPKHTHSALVSRIKIMADMDIAERRRPQDGRIQMMIRDKEIDLRISVLPTIE GEKVVIRILDKDNLMLELNELGFLPEHLTDFKSMIQQPHGMLLITGPTGSGKTTTLYS ALNRLNTEEKNIITIEDPVEYTLNGINQVQTNPQVGLTFADGLRSILRQDPDIVMVGE IRDKETAEIAIHAALTGHLVLTTLHTNEAAGALTRLINMGIEPFLVASSVIGVVAQRL VRTICDNCKAKDEELAVDFNLGKYIDGEEVLEIYEGDGCRRCNERGYLGRTAIHEILE IDSEIKKLIVKKASAAEIEEQAVNNGMITLESSGLEKVNQGITTLEEVMRVTKVYVD" misc_feature complement(1860979..1862646) /locus_tag="Acear_1774" /note="type IV-A pilus assembly ATPase PilB; Region: type_IV_pilB; TIGR02538" /db_xref="CDD:162908" misc_feature complement(1862227..1862544) /locus_tag="Acear_1774" /note="GSPII_E N-terminal domain; Region: GSPII_E_N; pfam05157" /db_xref="CDD:191212" misc_feature complement(1861162..1861956) /locus_tag="Acear_1774" /note="PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP). It is responsible for the export the majority of Gram-negative bacterial exoenzymes and toxins. PulE is a cytoplasmic protein of the GSP, which...; Region: PulE-GspE; cd01129" /db_xref="CDD:29995" misc_feature complement(1861675..1861698) /locus_tag="Acear_1774" /note="Walker A motif; other site" /db_xref="CDD:29995" misc_feature complement(order(1861486..1861491,1861609..1861614, 1861618..1861620,1861675..1861683,1861693..1861695)) /locus_tag="Acear_1774" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29995" misc_feature complement(1861486..1861503) /locus_tag="Acear_1774" /note="Walker B motif; other site" /db_xref="CDD:29995" gene complement(1862766..1863644) /locus_tag="Acear_1775" /db_xref="GeneID:9513832" CDS complement(1862766..1863644) /locus_tag="Acear_1775" /EC_number="1.1.1.25" /note="COGs: COG0169 shikimate 5-dehydrogenase; InterPro IPR011342:IPR016040:IPR013708:IPR006151; KEGG: drm:Dred_1018 shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase; PRIAM: shikimate dehydrogenase; SPTR: A4J3A0 shikimate dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain; shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase" /codon_start=1 /transl_table=11 /product="shikimate 5-dehydrogenase" /protein_id="YP_003828345.1" /db_xref="GI:302392525" /db_xref="GeneID:9513832" /translation="MSLDHLNLEERELVGLFGYPVKHSLSPVMHNTAFSKLDLDYLYL PFEVEPDNLKAAVEGIRGLNLRGVNLTIPHKEAVIPYLDQVSKEAELIGAVNTIKNEA GELIGYNTDGRGFVRSLQEEGFMPQNKNVLIVGAGGAARAVAFQLGLEGVERLYVANR TFKKAEDLVSDIKKGLEMETVQPLPLKQEKLKKIISGIDLLVDTTPIGMHPESDVEPV IEPELIQPDMVVSDLVYNPVETSLLKAAKDRGAKTVSGLGMLVHQGAISFEIWTGKKA PVKLMAETIRDNIELE" misc_feature complement(1862772..1863611) /locus_tag="Acear_1775" /note="shikimate 5-dehydrogenase; Reviewed; Region: aroE; PRK00258" /db_xref="CDD:178949" misc_feature complement(1863351..1863599) /locus_tag="Acear_1775" /note="Shikimate dehydrogenase substrate binding domain; Region: Shikimate_dh_N; pfam08501" /db_xref="CDD:149523" misc_feature complement(1862826..1863317) /locus_tag="Acear_1775" /note="NAD(P) binding domain of Shikimate dehydrogenase; Region: NAD_bind_Shikimate_DH; cd01065" /db_xref="CDD:133443" misc_feature complement(order(1862856..1862858,1862865..1862867, 1862940..1862942,1863312..1863314)) /locus_tag="Acear_1775" /note="shikimate binding site; other site" /db_xref="CDD:133443" misc_feature complement(order(1862865..1862870,1862877..1862879, 1862946..1862948,1863027..1863035,1863165..1863170, 1863228..1863230,1863237..1863239)) /locus_tag="Acear_1775" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:133443" gene complement(1864617..1865513) /locus_tag="Acear_1776" /db_xref="GeneID:9513833" CDS complement(1864617..1865513) /locus_tag="Acear_1776" /note="InterPro IPR000620; KEGG: dau:Daud_1134 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: B1I3S6 Putative uncharacterized protein; PFAM: EamA-like transporter family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828346.1" /db_xref="GI:302392526" /db_xref="GeneID:9513833" /translation="MEEYEEVSFKKRIKADLALLFVVFVWGTTFAIMKGVFDIVTPFY FLTLRFWTAVIVLVLIFHRRLKKLDWETIKLGSFVGIFLFGGFAFQVVGLNYTTASKA GFLTGLSVVIVPILSAIILKKIPSMLTVIGVTLATIGLGLLSFNGEFIFNFGDFLVFL CAVSLAVYILLVGKYVQQKDSILLTIVQITTVALLSGFSSLVEGSFEVVLQPELWGAV VYMAFFATTLALVVQNKAQEFTTPTRTAIIFSMEPVFAAVFAYFYLGEVISVNSYWGG LLIVVGMIIAELKLSKPKEEAV" misc_feature complement(1865079..1865444) /locus_tag="Acear_1776" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" misc_feature complement(1864662..1865438) /locus_tag="Acear_1776" /note="Carboxylate/Amino Acid/Amine Transporter; Region: 2A78; TIGR00950" /db_xref="CDD:162128" misc_feature complement(1864659..1865027) /locus_tag="Acear_1776" /note="EamA-like transporter family; Region: EamA; cl01037" /db_xref="CDD:194015" gene complement(1865532..1866002) /locus_tag="Acear_1777" /db_xref="GeneID:9513834" CDS complement(1865532..1866002) /locus_tag="Acear_1777" /note="InterPro IPR011642; KEGG: hor:Hore_08280 nucleoside recognition domain protein; PFAM: nucleoside recognition domain protein; SPTR: B8CWB6 Nucleoside recognition domain protein; PFAM: Nucleoside recognition" /codon_start=1 /transl_table=11 /product="nucleoside recognition domain protein" /protein_id="YP_003828347.1" /db_xref="GI:302392527" /db_xref="GeneID:9513834" /translation="MPWNEIINEIIVEGFGTLKQIALIIFPLMVVLEIGRDIGILDKV SQLFAPVLKIFKLPAKTALPLLVGQIFGLTYGAGVIIQISEEENISQNKLLVMAVFLA ICHAVIEDTLLFVAVGGRGGVILATRLFLAVGITYIFSKFLIKGTEEIETSIES" gene complement(1866027..1866446) /locus_tag="Acear_1778" /db_xref="GeneID:9513835" CDS complement(1866027..1866446) /locus_tag="Acear_1778" /note="InterPro IPR011642; KEGG: hor:Hore_08270 nucleoside recognition domain protein; PFAM: nucleoside recognition domain protein; SPTR: B8CWB5 Nucleoside recognition domain protein; PFAM: Nucleoside recognition" /codon_start=1 /transl_table=11 /product="nucleoside recognition domain protein" /protein_id="YP_003828348.1" /db_xref="GI:302392528" /db_xref="GeneID:9513835" /translation="MIGQDTIKRGLQKGWNTYLTLVKIIIPVHILVTILKYTPLIEIL ATWVAPVMKHLGLSGEAILALISGYLLNNYAALGVVTGLDFSIREITILGTMLGISHA LIIEAAVIKRIKVKILPLVCLRILVSLLTGYILNLLL" misc_feature complement(<1866198..1866419) /locus_tag="Acear_1778" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" gene complement(1866472..1868292) /locus_tag="Acear_1779" /db_xref="GeneID:9513836" CDS complement(1866472..1868292) /locus_tag="Acear_1779" /note="COGs: COG0370 Fe2+ transport system protein B; InterProIPR006073:IPR005225:IPR003373:IPR002917:IPR 011619:IPR011642:IPR011640; KEGG: hor:Hore_13350 ferrous iron transport protein FeoB; PFAM: GTP-binding protein HSR1-related; ferrous iron transport protein B domain protein; nucleoside recognition domain protein; ferrous iron transport B domain protein; SPTR: B8CXR6 ferrous iron transport protein FeoB; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: ferrous iron transport protein B; ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain" /codon_start=1 /transl_table=11 /product="ferrous iron transport protein B" /protein_id="YP_003828349.1" /db_xref="GI:302392529" /db_xref="GeneID:9513836" /translation="MDDCSEDVIVLAGNPNVGKSIFFNELTGIYVDVSNFPGTTLDIS HGYYKGNVVVDTPGVYGVSSFNEEETVARDVIIEADVVLNIVDAAHLERDLFLTQQII DMGIPVVVALNMMDEAKRQGLRIDVEGLEAELGVPVIGTVATEGQGMDKVKEALFKAR TGRSDHKLQRKLKRFNNRVNQPEALLILEDDPDLAEKYGIKFSDEGKNREKIYRRRRK RIDRIINRVVTRRIRRNSLKSRLSRLMVKPLTGIPILLSVLFIIYQVVGVLIAQKVVD FTEGVVLEGIYEPFIRSVVTEFIPVNSILGNILVGEFGLLTMTVTYIFGLLLPLVIGF YFFLSLLEDSGYLPRVATLTDRVLSKLGLNGRAVIPLILGFGCVTMAVITTRLLGSKR ERMIATFLLGLAIPCSAQLGVIVGLISPLGFKYLLFYAGIICFVLIAAGVILNWGLSG GSTGLLIDLPPLRVPRLSNVVTKTFTKAQLFIEEAGPIFLLGSLIITLMQINGWLGVI EDAVAPIIVNWLKLPKEMAVVFIMGIVRRDFGVAGLTKLALSPPQTLVALVTATLFVP CIASMMVIFKERNLKETILIWIGSWLSAFGIGGVLAQVLI" misc_feature complement(1866475..1868280) /locus_tag="Acear_1779" /note="Fe2+ transport system protein B [Inorganic ion transport and metabolism]; Region: FeoB; COG0370" /db_xref="CDD:30719" misc_feature complement(1867816..1868262) /locus_tag="Acear_1779" /note="Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this...; Region: FeoB; cd01879" /db_xref="CDD:133280" misc_feature complement(1868233..1868256) /locus_tag="Acear_1779" /note="G1 box; other site" /db_xref="CDD:133280" misc_feature complement(order(1867861..1867869,1867945..1867947, 1867951..1867956,1868230..1868241,1868245..1868247)) /locus_tag="Acear_1779" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133280" misc_feature complement(1868164..1868178) /locus_tag="Acear_1779" /note="Switch I region; other site" /db_xref="CDD:133280" misc_feature complement(1868173..1868175) /locus_tag="Acear_1779" /note="G2 box; other site" /db_xref="CDD:133280" misc_feature complement(1868119..1868130) /locus_tag="Acear_1779" /note="G3 box; other site" /db_xref="CDD:133280" misc_feature complement(order(1868056..1868058,1868065..1868121)) /locus_tag="Acear_1779" /note="Switch II region; other site" /db_xref="CDD:133280" misc_feature complement(1867945..1867956) /locus_tag="Acear_1779" /note="G4 box; other site" /db_xref="CDD:133280" misc_feature complement(1867861..1867869) /locus_tag="Acear_1779" /note="G5 box; other site" /db_xref="CDD:133280" misc_feature complement(1867033..1867314) /locus_tag="Acear_1779" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" misc_feature complement(1866862..1867017) /locus_tag="Acear_1779" /note="Ferrous iron transport protein B C terminus; Region: FeoB_C; pfam07664" /db_xref="CDD:191804" misc_feature complement(1866562..1866840) /locus_tag="Acear_1779" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" gene complement(1868468..1868896) /locus_tag="Acear_1780" /db_xref="GeneID:9513837" CDS complement(1868468..1868896) /locus_tag="Acear_1780" /note="COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: hor:Hore_05900 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: B8D2C0 ferric uptake regulator, Fur family; PFAM: ferric uptake regulator family" /codon_start=1 /transl_table=11 /product="ferric uptake regulator, Fur family" /protein_id="YP_003828350.1" /db_xref="GI:302392530" /db_xref="GeneID:9513837" /translation="MTIKIKNVKDKLAANNYKMTSQRRIILESIIENEGEHLSAEEIY ARVKEEEPGIGLATVYRTLELFCDLNILHQLNFDDNCRRYELNHENKHHHHLICINCG SITEFNDEILEDFETGIEQEHNFSVTDHRIKFYGYCKNCQ" misc_feature complement(1868483..1868833) /locus_tag="Acear_1780" /note="Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators; Region: Fur_like; cd07153" /db_xref="CDD:133478" misc_feature complement(order(1868579..1868581,1868612..1868614, 1868618..1868620,1868639..1868641,1868786..1868788)) /locus_tag="Acear_1780" /note="metal binding site 2 [ion binding]; metal-binding site" /db_xref="CDD:133478" misc_feature complement(1868690..1868734) /locus_tag="Acear_1780" /note="putative DNA binding helix; other site" /db_xref="CDD:133478" misc_feature complement(order(1868507..1868509,1868558..1868560, 1868615..1868617,1868621..1868623)) /locus_tag="Acear_1780" /note="metal binding site 1 [ion binding]; metal-binding site" /db_xref="CDD:133478" misc_feature complement(order(1868486..1868512,1868516..1868524, 1868549..1868554,1868600..1868608)) /locus_tag="Acear_1780" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133478" misc_feature complement(order(1868483..1868485,1868594..1868596, 1868603..1868605)) /locus_tag="Acear_1780" /note="structural Zn2+ binding site [ion binding]; other site" /db_xref="CDD:133478" gene complement(1868958..1869452) /locus_tag="Acear_1781" /db_xref="GeneID:9513838" CDS complement(1868958..1869452) /locus_tag="Acear_1781" /EC_number="2.7.6.3" /note="COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: bay:RBAM_000900 hypothetical protein; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; PRIAM:2-amino-4-hydroxy-6-hydroxymethyldihydropteri dinediphosphokinase; SPTR: A7Z0K2 FolK; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase" /codon_start=1 /transl_table=11 /product="2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase" /protein_id="YP_003828351.1" /db_xref="GI:302392531" /db_xref="GeneID:9513838" /translation="MTTVYLSLGSNKESREEYLQRAIKKLQDHSGIRVIASSPVYETK PVGYTDQDDFLNLVLEVKTTLASLELLDYIQEVELELDRTREIRWGPRTIDIDIILFG EKEIESERLTIPHPRFHKRAFVLVPLLDLTDEVVYEGKTAAELLDELPHKADVVEYKS CLRI" misc_feature complement(1869060..1869443) /locus_tag="Acear_1781" /note="7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after...; Region: HPPK; cd00483" /db_xref="CDD:29601" misc_feature complement(order(1869084..1869086,1869090..1869092, 1869105..1869110,1869117..1869119,1869159..1869164, 1869168..1869170,1869177..1869179,1869186..1869188, 1869198..1869200,1869204..1869206,1869219..1869221, 1869228..1869230,1869240..1869242,1869285..1869287, 1869291..1869293,1869315..1869317,1869321..1869326, 1869426..1869428)) /locus_tag="Acear_1781" /note="catalytic center binding site [active]" /db_xref="CDD:29601" misc_feature complement(order(1869090..1869092,1869105..1869110, 1869117..1869119,1869159..1869164,1869177..1869179, 1869198..1869200,1869204..1869206,1869219..1869221, 1869228..1869230,1869240..1869242)) /locus_tag="Acear_1781" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29601" gene complement(1869449..1869817) /locus_tag="Acear_1782" /db_xref="GeneID:9513839" CDS complement(1869449..1869817) /locus_tag="Acear_1782" /EC_number="4.1.2.25" /note="COGs: COG1539 Dihydroneopterin aldolase; InterPro IPR006157:IPR006156; KEGG: dae:Dtox_0236 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; PRIAM: Dihydroneopterin aldolase; SPTR: B0AC35 Putative uncharacterized protein; TIGRFAM: dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain" /codon_start=1 /transl_table=11 /product="dihydroneopterin aldolase" /protein_id="YP_003828352.1" /db_xref="GI:302392532" /db_xref="GeneID:9513839" /translation="MSDYIRLEGLEFYGYHGALAEEKELGQRFIVDLELEIDLQEAGM TDRLDQTINYAEVYQKVKEIVEGDSYDLIEAVAEKIADSLLRDYSILEGIAVRVKKPE VPIPGVLDWVEVEIERSSKS" misc_feature complement(1869461..1869811) /locus_tag="Acear_1782" /note="Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines...; Region: DHNA_DHNTPE; cd00534" /db_xref="CDD:29762" misc_feature complement(order(1869470..1869496,1869509..1869514, 1869737..1869763,1869779..1869811)) /locus_tag="Acear_1782" /note="homooctamer interface [polypeptide binding]; other site" /db_xref="CDD:29762" misc_feature complement(order(1869476..1869478,1869518..1869520, 1869596..1869607,1869752..1869754,1869761..1869769)) /locus_tag="Acear_1782" /note="active site" /db_xref="CDD:29762" gene complement(1869820..1871019) /locus_tag="Acear_1783" /db_xref="GeneID:9513840" CDS complement(1869820..1871019) /locus_tag="Acear_1783" /EC_number="2.5.1.15" /note="COGs: COG0294 dihydropteroate synthase; InterPro IPR000489:IPR006390:IPR011005; KEGG: cth:Cthe_2581 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; PRIAM: dihydropteroate synthase; SPTR: C7HBS7 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase" /codon_start=1 /transl_table=11 /product="dihydropteroate synthase" /protein_id="YP_003828353.1" /db_xref="GI:302392533" /db_xref="GeneID:9513840" /translation="MQQARVLEIKDEASFKEELEELGTDKSGINIMAPKSQYYLIKLK DIPLKAALILKQEMLSKGGEVALPREGAGLQVEETDLILMGTRSIYKKVEKVLRQQPF GLREIGELILETLDSYQSELGSISGSNYEFNFGKRTYIMGILNVTPDSFSDGGEYNDF DTAVERAQEMIDNGADIIDIGGESTRPGSDPLPLEEELERVIPVIEYLTPRIDVPISV DTYKSEVGRRALEAGADIINDITGFKEDPKLAEVAAEYDAPVILMHIQGRPKNMQQNP SYEDLISEILNYLQESIDVGLEAGIKREKIIVDPGIGFGKTTDHNLEIMQRLGEFKSL GQPILLGTSRKSMIGNTLDLPVDQRVEGTGATVSIGIANGADIVRVHDVKEMARVAKM TDAMVRR" misc_feature complement(1869838..1870608) /locus_tag="Acear_1783" /note="DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and...; Region: DHPS; cd00739" /db_xref="CDD:29545" misc_feature complement(1869832..1870602) /locus_tag="Acear_1783" /note="dihydropteroate synthase; Region: DHPS; TIGR01496" /db_xref="CDD:162390" misc_feature complement(order(1869877..1869879,1869883..1869885, 1869985..1869987,1869997..1869999,1870093..1870095, 1870231..1870233,1870300..1870302,1870306..1870308, 1870363..1870365,1870585..1870587)) /locus_tag="Acear_1783" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:29545" misc_feature complement(order(1869853..1869858,1869901..1869903, 1869913..1869915,1869925..1869927,1870039..1870044, 1870054..1870056)) /locus_tag="Acear_1783" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29545" misc_feature complement(1869985..1869993) /locus_tag="Acear_1783" /note="inhibitor binding site; inhibition site" /db_xref="CDD:29545" gene complement(1871043..1871555) /locus_tag="Acear_1784" /db_xref="GeneID:9513841" CDS complement(1871043..1871555) /locus_tag="Acear_1784" /note="InterPro IPR006674:IPR003607; KEGG: dae:Dtox_0234 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C1TFV6 Uncharacterized domain HDIG-containing protein; PFAM: HD domain" /codon_start=1 /transl_table=11 /product="metal dependent phosphohydrolase" /protein_id="YP_003828354.1" /db_xref="GI:302392534" /db_xref="GeneID:9513841" /translation="MERLNKIIDSQEYNSYLQKNHQREQDRIFCRHTWQHFIAVARIT YLLILEEELAEELLTKWQLEEKNDLKEIVYTAAMLHDIGRWKQYDTGQDHAAVSAKLA VDLLEKYRYTALEKEIILTAIKEHRGKPDSDKSILGCLLCRGDNLSRNCRECFAREKC KSVKNPTIKY" misc_feature complement(1871094..1871471) /locus_tag="Acear_1784" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl00076" /db_xref="CDD:193645" gene complement(1871654..1872073) /locus_tag="Acear_1785" /db_xref="GeneID:9513842" CDS complement(1871654..1872073) /locus_tag="Acear_1785" /note="InterPro IPR000671; KEGG: cce:Ccel_1072 hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; SPTR: B8HZT1 Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease; PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease" /codon_start=1 /transl_table=11 /product="hydrogenase maturation protease" /protein_id="YP_003828355.1" /db_xref="GI:302392535" /db_xref="GeneID:9513842" /translation="MGYELAVVGLGNTSRQDRGIGIYLLDSLQDRFSKYPIKFINGGV DGRDLFNLLQQLTVKKVIVLDTVEKIESPGSLNYLTMALDQAGRLEKLMIITIEVFET DWGSELSFPLVKKYKEISTEIESVIEQMLTRPLRINP" misc_feature complement(1871729..1872058) /locus_tag="Acear_1785" /note="Hydrogenase specific C-terminal endopeptidases, also called Hydrogen Maturation Proteases (H2MP). These enzymes belong to the peptidase family M52. Maturation of [FeNi] hydrogenases includes formation of the nickel metallocenter, proteolytic processing...; Region: H2MP; cd00518" /db_xref="CDD:99872" misc_feature complement(order(1871879..1871881,1872020..1872022)) /locus_tag="Acear_1785" /note="nickel binding site [ion binding]; other site" /db_xref="CDD:99872" gene complement(1872131..1873246) /locus_tag="Acear_1786" /db_xref="GeneID:9513843" CDS complement(1872131..1873246) /locus_tag="Acear_1786" /note="COGs: COG1641 conserved hypothetical protein; InterPro IPR002822; KEGG: ckr:CKR_0284 hypothetical protein; PFAM: protein of unknown function DUF111; SPTR: A1HNV5 Putative uncharacterized protein; PFAM: protein of unknown function DUF111; TIGRFAM: conserved hypothetical protein TIGR00299" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828356.1" /db_xref="GI:302392536" /db_xref="GeneID:9513843" /translation="MKVAYFDLTNGVDAAGILGAVIDLGWKVDNLRKLLSGLNLTELE LDLVERVRVSVQDKRVGVELGLDSDLEEEMLDYKEVKELISSSNLDEMFIKEALEIFA ALFKIKTELFLREVITALVYILGILNGIKMLKLERIYASSIRLGESPEFTVLELLKGN PVSFLADKERLVTELGAALVSSLVDEFNSGQNMILEDSGYGLITESSEKLRITLGSID KEAEYQQDEVITVETNIDDMSQEFYDYIIQQLFKVGALDVYLTPIQMKKNRPAQKLTV LTAERNLNNLLEIIFAETTTLGVRINRQQRYKLEREIRQISLEGREVDVKLGFKGDKL VNIAPEYDSCKQAAEDLDLPLKEVYRRTVASIDRLDT" misc_feature complement(1872134..1873246) /locus_tag="Acear_1786" /note="Uncharacterized conserved protein [Function unknown]; Region: COG1641; cl03398" /db_xref="CDD:186571" misc_feature complement(1872167..1873237) /locus_tag="Acear_1786" /note="Protein of unknown function DUF111; Region: DUF111; pfam01969" /db_xref="CDD:145249" gene complement(1873269..1874120) /locus_tag="Acear_1787" /db_xref="GeneID:9513844" CDS complement(1873269..1874120) /locus_tag="Acear_1787" /note="COGs: COG0492 Thioredoxin reductase; InterPro IPR000103:IPR013027; KEGG: cbh:CLC_3377 pyridine nucleotide-disulfide family oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A7FZ25 Oxidoreductase, pyridine nucleotide-disulphide family; PFAM: Pyridine nucleotide-disulphide oxidoreductase" /codon_start=1 /transl_table=11 /product="FAD-dependent pyridine nucleotide-disulfide oxidoreductase" /protein_id="YP_003828357.1" /db_xref="GI:302392537" /db_xref="GeneID:9513844" /translation="MDDIEKFDIVVIGGGPAGLSAAINAKIRNKEVAIFENQQLGGKI WDAPHVDNYLGFYDIDGQELVNKFIDHINKLEIPVIKKKVIRTLSMGEYFSITTNQEN YEADKIILATGVNNPNRIDGETEFLGQGVSYCATCDGKLFRGKKVAVLGYAEDSVEET NYLAELAETTYFIPEDDLDYEELASEVEIIESEPEEIKGDGFVDELVLEDRSLEVAGV MILRPTVPTDEIIDGLDLEDNYIKVDSNFETSVEGVYAAGDCVGKPLQLPKAVGEGQV AILNAVE" misc_feature complement(<1873782..1874102) /locus_tag="Acear_1787" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(1873278..1874099) /locus_tag="Acear_1787" /note="thioredoxin-disulfide reductase; Region: TRX_reduct; TIGR01292" /db_xref="CDD:162288" gene 1874346..1875641 /locus_tag="Acear_1788" /db_xref="GeneID:9513845" CDS 1874346..1875641 /locus_tag="Acear_1788" /EC_number="6.2.1.30" /note="COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: ate:Athe_1504 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; PRIAM: Phenylacetate--CoA ligase; SPTR: B9MJU4 Phenylacetate--CoA ligase; PFAM: AMP-binding enzyme; TIGRFAM: phenylacetate-CoA ligase" /codon_start=1 /transl_table=11 /product="phenylacetate-CoA ligase" /protein_id="YP_003828358.1" /db_xref="GI:302392538" /db_xref="GeneID:9513845" /translation="MIWNKEYEAIERKELTNLQVRRLQQTIQRIYENVPFYRRKLDEK GVAAEDITSLSDLSKLPFTTKDDLRDNYPFDLFAVSLDEIVRIHSSSGTTGKPTVVGY TEEDIEIWTELIARTMTAAGIQKGDIVQNAFGYGLFTGGLGIHYGAEEVGASVVPISG GNTKRQIKLMDDFGSTALLCTPSYALYIAEVAEELGFDIKNSELQAGIFGAEPWSDSM RDEIEDLLNITAIDIYGLSEVIGPGVATECQAQNGLHIFEDHFIPEVIDPETGEKLGY GKQGELVFTTITKTGLPVIRYRTKDISVLHKEKCSCGRTLVRMERVSGRVDDMLIIRG VNVFPSQIESVLLDISETEPHYQLIVEREGRLDKLEIQVEVSDKIFSDEVRRLEELER KIHHEIESVLGISVQVKLVEPNTIPRSEGKAKRVIDKRK" misc_feature 1874367..1875635 /locus_tag="Acear_1788" /note="Acyl-protein synthetase, LuxE; Region: LuxE; cl10450" /db_xref="CDD:186997" gene 1875663..1876094 /locus_tag="Acear_1789" /db_xref="GeneID:9513846" CDS 1875663..1876094 /locus_tag="Acear_1789" /note="COGs: COG4747 hypothetical protein; InterPro IPR002912; KEGG: dae:Dtox_3510 amino acid-binding ACT domain protein; PFAM: amino acid-binding ACT domain protein; SPTR: C1TBZ0 ACT domain protein; PFAM: ACT domain" /codon_start=1 /transl_table=11 /product="ACT domain protein" /protein_id="YP_003828359.1" /db_xref="GI:302392539" /db_xref="GeneID:9513846" /translation="MKVKQISIFLENKSGRLADVTTVLGKEDINIRALSIADTSDFGI LRLIVDQPKKALEILKAKNFTVSETEVIAVEVSDDPGGLSQALAALKEENINIEYMYA FIEKSSEDALVVFRVEEISAAISVLEEKGFNLLKAEEVYKL" misc_feature 1875663..1876091 /locus_tag="Acear_1789" /note="ACT domain-containing protein [General function prediction only]; Region: COG4747" /db_xref="CDD:34362" misc_feature 1875669..1875866 /locus_tag="Acear_1789" /note="N-terminal ACT domain of a novel protein composed almost entirely of two tandem ACT domains; Region: ACT_Bt0572_1; cd04908" /db_xref="CDD:153180" misc_feature 1875873..1876067 /locus_tag="Acear_1789" /note="C-terminal ACT domain of a novel protein composed of just two ACT domains; Region: ACT_Bt0572_2; cd04882" /db_xref="CDD:153154" gene complement(1876241..1876624) /locus_tag="Acear_1790" /db_xref="GeneID:9513847" CDS complement(1876241..1876624) /locus_tag="Acear_1790" /note="COGs: COG1342 DNA-binding protein; InterPro IPR002852; KEGG: hor:Hore_18270 predicted DNA-binding protein; PFAM: protein of unknown function DUF134; SPTR: B8CZ57 UPF0251 protein Hore_18270; PFAM: protein of unknown function DUF134" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828360.1" /db_xref="GI:302392540" /db_xref="GeneID:9513847" /translation="MGRPPKERRVGYIPEVKFFKPVGIPKRELKEVSLTIEEVEAIRL KDKEDLTQQEASERMEVSRPTFQRILTEARKKITDALIEGKSLKFRGGNYRFKPRCAK CGSDFNPKQKNGRHRWGQQVCPQCD" misc_feature complement(1876340..1876624) /locus_tag="Acear_1790" /note="Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial...; Region: Sigma70_r4; cl01055" /db_xref="CDD:197420" gene complement(1876771..1877118) /locus_tag="Acear_1791" /db_xref="GeneID:9513848" CDS complement(1876771..1877118) /locus_tag="Acear_1791" /note="KEGG: mta:Moth_1413 hypothetical protein; SPTR: Q2RIL3 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828361.1" /db_xref="GI:302392541" /db_xref="GeneID:9513848" /translation="MPCGDGTGPEGFGPMTGRGAGFCAGYNVPGYMNDGPRRGMGRGL GRGRGMGRRGAGRRAMGRRRTPAYRPRPVNNSNVDQTEAEVNYLQQEKEALENELEAI QERILELKDDNKE" misc_feature complement(1876774..>1876887) /locus_tag="Acear_1791" /note="bZIP transcription factor; Region: bZIP_1; cl02576" /db_xref="CDD:194369" gene complement(1877271..1878065) /locus_tag="Acear_1792" /db_xref="GeneID:9513849" CDS complement(1877271..1878065) /locus_tag="Acear_1792" /note="COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR019591; KEGG: hor:Hore_18320 ATP-binding protein involved in chromosome partitioning; PFAM: ATPase-like, ParA/MinD; SPTR: B8CZ62 ATP-binding protein involved in chromosome partitioning; PFAM: ParA/MinD ATPase like; Anion-transporting ATPase" /codon_start=1 /transl_table=11 /product="ATPase-like, ParA/MinD" /protein_id="YP_003828362.1" /db_xref="GI:302392542" /db_xref="GeneID:9513849" /translation="MYELEDGKFKLEYGSVNEGMISVASGKGGVGKSTITVNLAVSLS ELGKKVGIIDADIRGFSIPRILGLTEEPEGIDDKKLKPPVAKGIKVMSMGSLVQEEDP IIWRAPMLHGILEQFMTEVQWGELDYLLFDLPPGTGDMPLNIMQQLPDSEIVIVTTPQ IAATNVAGRIGKMADKLECETLGVVENMSYYQCSDCGNKEYIFGQGGGKAMAERLETE LLGELPLLPAVREDSDQGKSIILEEPESDVSKEFISIAKKIMDKHL" misc_feature complement(1877280..1877966) /locus_tag="Acear_1792" /note="ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]; Region: Soj; COG1192" /db_xref="CDD:31385" misc_feature complement(1877430..1877966) /locus_tag="Acear_1792" /note="MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions...; Region: MRP-like; cd02037" /db_xref="CDD:73300" gene complement(1878089..1878442) /locus_tag="Acear_1793" /db_xref="GeneID:9513850" CDS complement(1878089..1878442) /locus_tag="Acear_1793" /note="COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: hor:Hore_18360 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: B8CZ66 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: dinitrogenase iron-molybdenum cofactor" /codon_start=1 /transl_table=11 /product="dinitrogenase iron-molybdenum cofactor biosynthesis protein" /protein_id="YP_003828363.1" /db_xref="GI:302392543" /db_xref="GeneID:9513850" /translation="MKKIAVPTDGDNVAQHFGRCPQYTIVEADGDEIKSKELIENPGH KPGFLPKYLNERNVDVVLAGGMGRRAKDLFDQNGIESETGVTGVVDEAIEEYLAGNLD AEGDICDHDEHDCDH" misc_feature complement(1878152..1878436) /locus_tag="Acear_1793" /note="This uncharacterized conserved protein belongs to a family of iron-molybdenum cluster-binding proteins that includes NifX, NifB, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of...; Region: MTH1175; cd00851" /db_xref="CDD:29645" gene complement(1878448..1879314) /locus_tag="Acear_1794" /db_xref="GeneID:9513851" CDS complement(1878448..1879314) /locus_tag="Acear_1794" /note="COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017896:IPR002586:IPR001450:IPR017900; KEGG: hor:Hore_18370 cobyrinic acid ac-diamide synthase; PFAM: cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8CZ67 cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; 4Fe-4S binding domain" /codon_start=1 /transl_table=11 /product="cobyrinic acid ac-diamide synthase" /protein_id="YP_003828364.1" /db_xref="GI:302392544" /db_xref="GeneID:9513851" /translation="MKKVTVISGKGGTGKTIVTANLTALAQDLVLADCDVDAPNMHLL MKPKILEEQSYKGGKVAVKDEEECIDCGLCKKLCNFGAVTDDYEIDEVKCEGCGLCAA KCPTDALQLTVEKTGNIFLSRSRFGPMVHAKLGIGAENSGKLVSEVSQKAEEIAKEQE KDLVLIDGSPGIGCPVVASLNGADMTLIVTEPTKSGLADLKRVLQVTEHFGINALVII NKSDLNEDITVEIEEFCQQQDIMLAGKIPFDSKVVEAMRQGELIVDYNPESRVTAALK GIWKRVNNKLKE" misc_feature complement(1878457..1879314) /locus_tag="Acear_1794" /note="MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion]; Region: COG1149" /db_xref="CDD:31343" misc_feature complement(1878574..1879308) /locus_tag="Acear_1794" /note="This protein family's function is unkown. It contains nucleotide binding site. It uses NTP as energy source to transfer electron or ion; Region: Fer4_NifH_child; cd03110" /db_xref="CDD:73339" misc_feature complement(1879264..1879290) /locus_tag="Acear_1794" /note="P loop nucleotide binding; other site" /db_xref="CDD:73339" misc_feature complement(1878802..1878816) /locus_tag="Acear_1794" /note="switch II; other site" /db_xref="CDD:73339" gene complement(1879311..1880153) /locus_tag="Acear_1795" /db_xref="GeneID:9513852" CDS complement(1879311..1880153) /locus_tag="Acear_1795" /note="COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017896:IPR002586:IPR001450:IPR017900; KEGG: hor:Hore_18380 cobyrinic acid ac-diamide synthase; PFAM: cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8CZ68 cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain" /codon_start=1 /transl_table=11 /product="cobyrinic acid ac-diamide synthase" /protein_id="YP_003828365.1" /db_xref="GI:302392545" /db_xref="GeneID:9513852" /translation="MKITVLSGKGGTGKTTVATNLALSLDNVQFIDADVEEPNSYIFV KPDFADRSELVLREVPEIDEEKCTNCQQCIDFCEYNALALFGDNLMVFPKLCHSCGGC KHICPEEAITAKDRKTGEIRWDPDINGLEFWQGELNIGEISAVPVIEKLKEYTNEDKT VIMDAPPGTTCPTVEAVTDSDYCILVTEPTPFGLHDLKMAVEVVKKLKKPYGVVINRS EEDGDGIIEEYCNVEGIPILLRIPFQREIAELYSEGIPFVEEMPEWREHFQEVVCEAK KVVE" misc_feature complement(1879314..1880153) /locus_tag="Acear_1795" /note="MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion]; Region: COG1149" /db_xref="CDD:31343" misc_feature complement(1879428..1880150) /locus_tag="Acear_1795" /note="This protein family's function is unkown. It contains nucleotide binding site. It uses NTP as energy source to transfer electron or ion; Region: Fer4_NifH_child; cd03110" /db_xref="CDD:73339" misc_feature complement(1880106..1880132) /locus_tag="Acear_1795" /note="P loop nucleotide binding; other site" /db_xref="CDD:73339" misc_feature complement(1879650..1879664) /locus_tag="Acear_1795" /note="switch II; other site" /db_xref="CDD:73339" gene complement(1880173..1880535) /locus_tag="Acear_1796" /db_xref="GeneID:9513853" CDS complement(1880173..1880535) /locus_tag="Acear_1796" /note="COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: mtp:Mthe_0560 dinitrogenase iron-molybdenum cofactor biosynthesis; PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: A0B6M7 dinitrogenase iron-molybdenum cofactor biosynthesis; PFAM: dinitrogenase iron-molybdenum cofactor" /codon_start=1 /transl_table=11 /product="dinitrogenase iron-molybdenum cofactor biosynthesis protein" /protein_id="YP_003828366.1" /db_xref="GI:302392546" /db_xref="GeneID:9513853" /translation="MKIAVTASNNTGLETEVDPRFGRASYFAIIDSESMEVEFIDNSA ANASSGAGIEAAQMVSDQGVEELISVKVGPKAFKALQSAGIDIYTVDGGSLKEVVEAY KAGELDKLDNPTNPGHMG" misc_feature complement(1880227..1880535) /locus_tag="Acear_1796" /note="This uncharacterized conserved protein belongs to a family of iron-molybdenum cluster-binding proteins that includes NifX, NifB, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of...; Region: MTH1175; cd00851" /db_xref="CDD:29645" gene complement(1880760..1881221) /locus_tag="Acear_1797" /db_xref="GeneID:9513854" CDS complement(1880760..1881221) /locus_tag="Acear_1797" /note="COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: tpd:Teth39_1056 ferric uptake regulator family protein; PFAM: ferric-uptake regulator; SPTR: C6P894 ferric uptake regulator, Fur family; PFAM: ferric uptake regulator family" /codon_start=1 /transl_table=11 /product="ferric uptake regulator, Fur family" /protein_id="YP_003828367.1" /db_xref="GI:302392547" /db_xref="GeneID:9513854" /translation="MALKTEKDSKVRGIISDIRWQTDLHLTSQRKVILETLIENSDQH LSVDDIYSLIKEKNDFIGLATIYRNLDLLEELGVVVKRNFDDKSAKYEFIFGDKLKHH HLICESCGKVMEIENFLPDGLKEEVMETKEFQITDYSLQIYGYCKECRSNS" misc_feature complement(1880784..1881137) /locus_tag="Acear_1797" /note="Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators; Region: Fur_like; cd07153" /db_xref="CDD:133478" misc_feature complement(order(1880880..1880882,1880913..1880915, 1880919..1880921,1880946..1880948,1881090..1881092)) /locus_tag="Acear_1797" /note="metal binding site 2 [ion binding]; metal-binding site" /db_xref="CDD:133478" misc_feature complement(1880994..1881038) /locus_tag="Acear_1797" /note="putative DNA binding helix; other site" /db_xref="CDD:133478" misc_feature complement(order(1880808..1880810,1880859..1880861, 1880916..1880918,1880922..1880924)) /locus_tag="Acear_1797" /note="metal binding site 1 [ion binding]; metal-binding site" /db_xref="CDD:133478" misc_feature complement(order(1880787..1880813,1880817..1880825, 1880850..1880855,1880901..1880909)) /locus_tag="Acear_1797" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133478" misc_feature complement(order(1880784..1880786,1880895..1880897, 1880904..1880906)) /locus_tag="Acear_1797" /note="structural Zn2+ binding site [ion binding]; other site" /db_xref="CDD:133478" gene complement(1881371..1882081) /locus_tag="Acear_1798" /db_xref="GeneID:9513855" CDS complement(1881371..1882081) /locus_tag="Acear_1798" /note="COGs: COG2186 transcriptional regulators; InterPro IPR000524:IPR011991:IPR011711; KEGG: mta:Moth_2304 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C0GH87 GntR family transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_003828368.1" /db_xref="GI:302392548" /db_xref="GeneID:9513855" /translation="MSIFKPIKNKRIYQQIIEQIRELITDGTLEPGDKLMSERAMAEE LDVSRASIREAFSVLEMLGLIESRPGEGTFIKEMKEDKVVEPLALILAGDTDNVFELI EVRKILEVESAALATKRATEEDIERIGEVIQDMEQDVKEGRLGDQADVKFHIAIVKAT HNQMFTKVMYTISDLLIQAIGQSRQKLFTVEGNNEMLYKQHKKIYENIAAKKPQLARE SMYNHLETTKNELEKLMK" misc_feature complement(1881854..>1882006) /locus_tag="Acear_1798" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature complement(order(1881863..1881874,1881878..1881883, 1881911..1881913,1881920..1881925,1881929..1881943, 1881965..1881970,1881974..1881976)) /locus_tag="Acear_1798" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature complement(1881404..1881784) /locus_tag="Acear_1798" /note="FCD domain; Region: FCD; cl11656" /db_xref="CDD:196275" gene complement(1882303..1883577) /locus_tag="Acear_1799" /db_xref="GeneID:9513856" CDS complement(1882303..1883577) /locus_tag="Acear_1799" /note="COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: amt:Amet_3746 hypothetical protein; PFAM: protein of unknown function DUF2088; SPTR: B0MCQ2 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828369.1" /db_xref="GI:302392549" /db_xref="GeneID:9513856" /translation="MTTVKLPYGKEKLTLELPEDELKGVLTSQTHEYTVEKSEKELVK EALAEPIGTPTLQELAQDKEEIVIISSDHTRPVPSHVTMPILLDKIRAGNPEAEITIL VATGFHRASTEEELRDKYGDEIVDNERIINHDCRDEDSLVEIGTLPSGGDLILNQLAV EADLLIAEGFIEPHFFAGFSGGRKSILPGIASKKTVLANHCAEFVGHDHARTGILDGN PMHEDMLYAAEEAGLDFILNVAINEEKKVINAFAGHYQEAHLEGCDFVTKLAGAESKP ADIVVTTNGGYPLDQNIYQSVKSMTAAEATCNENGVIIIASECSDGHGGEGFYRTFAE AETVPEVMEEIEVRGRNETVPDQWESQVLARILLQFEVIMVTDAPREMVEDMHMKWAS DIDEAVTMAKEIVNNDNPEITVVPDGVSVIVK" misc_feature complement(1882309..1883577) /locus_tag="Acear_1799" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3875" /db_xref="CDD:33664" misc_feature complement(1882939..1883556) /locus_tag="Acear_1799" /note="Domain of unknown function (DUF2088); Region: DUF2088; pfam09861" /db_xref="CDD:150523" gene complement(1883599..1884861) /locus_tag="Acear_1800" /db_xref="GeneID:9513857" CDS complement(1883599..1884861) /locus_tag="Acear_1800" /note="COGs: COG0247 Fe-S oxidoreductase; InterProIPR017896:IPR012257:IPR012285:IPR004017:IPR 017900:IPR009051; KEGG: dhd:Dhaf_4517 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: A1HQY5 Putative uncharacterized protein; PFAM: cysteine-rich domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828370.1" /db_xref="GI:302392550" /db_xref="GeneID:9513857" /translation="MSKVLQEIEDELANCVKCGLCREVCPIFTELDNEAAVARGKVNL MESVLNEDLELTDKYKEFMELCLLCKACADNCPCGVEVDKLVLKAREELADEKGLSVL KKGIFSIVGNKTLYPIAMKLGANFQGLAFKENDGPQSGNNIRLGGLGLDKDRVVPNLA TEHFRDKYPEVIEVDNPEGRVAFFTGCAINYIEPKVGEAVVNVLTENNIEVVIPEEQQ CCGLAINSYGDVDTAKELAKNNIEAINSYDVDAIVTACGSGGSTLREEYPEWLEKTEF EAEVYDISEYLVDVVGIDREKLGSVRKKVTYHDSCHLSRGMGVTEQPREILEAIPGLY FEEMEEPNRCCGSAGTFNIAHYDLSMDIHRHKTEDIKQTGADTVAAGCLACLMQIVDG LNKADLDKDVVHTVQLLDEAYQKGKENN" misc_feature complement(1883623..1884849) /locus_tag="Acear_1800" /note="Fe-S oxidoreductase [Energy production and conversion]; Region: GlpC; COG0247" /db_xref="CDD:30596" misc_feature complement(<1884568..>1884849) /locus_tag="Acear_1800" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" misc_feature complement(1884070..1884252) /locus_tag="Acear_1800" /note="Cysteine-rich domain; Region: CCG; pfam02754" /db_xref="CDD:111630" misc_feature complement(1883695..1883877) /locus_tag="Acear_1800" /note="Cysteine-rich domain; Region: CCG; pfam02754" /db_xref="CDD:111630" gene complement(1884854..1886251) /locus_tag="Acear_1801" /db_xref="GeneID:9513858" CDS complement(1884854..1886251) /locus_tag="Acear_1801" /note="COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016167:IPR016168:IPR006094:IPR 004113:IPR016164; KEGG: hmo:HM1_0364 glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein; SPTR: B0TF00 Glycolate oxidase, subunit glcd; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD" /codon_start=1 /transl_table=11 /product="FAD linked oxidase domain protein" /protein_id="YP_003828371.1" /db_xref="GI:302392551" /db_xref="GeneID:9513858" /translation="MFSKSVIDKFNDVVGAEYVLTSKEELLSYSYDSTAGMESMTPEL VVKPANTEEVAEVVKVASEEKINIIPRGAGTNLCGGTIPIENSVVVVLTRMDKILEID EENLTATVEAGVITEELCNRVEAKELLFPPDPGSMSVSTIGGNIAECAGGLRGLKYGV TKDYVMGLEIVLPNGKIIEIGGKTVKNVTGYDLPNLYTGSEGTLGIITKATLELIPAP DTRKTMLAIFDELDDAAETISSIISNKVIPVTLEIMDQVTIKTVEAFAEIGLPTDAEA VLLIEVDGLEEVVERDYKKVIKICEEHNAREVELAKSDEERDELKAARKSSFSALARE KPTTILEDATVPRSNIPAMIKGIREIAERYDLKIGTFGHAGDGNLHPTILADERDEEE MERVHKAVEEIFDLALELDGTLSGEHGIGSAKVGFMTQEIGEDGLQALRDLKYALDPK GLFNPHKLIGADDNE" misc_feature complement(1885709..1886128) /locus_tag="Acear_1801" /note="FAD binding domain; Region: FAD_binding_4; pfam01565" /db_xref="CDD:190040" misc_feature complement(1884881..1886119) /locus_tag="Acear_1801" /note="glycolate oxidase, subunit GlcD; Region: glcD; TIGR00387" /db_xref="CDD:129482" gene complement(1886466..1888121) /locus_tag="Acear_1802" /db_xref="GeneID:9513859" CDS complement(1886466..1888121) /locus_tag="Acear_1802" /note="COGs: COG1620 L-lactate permease; InterPro IPR003804; KEGG: amt:Amet_3751 L-lactate transport; PFAM: L-lactate permease; SPTR: A6TUK2 L-lactate transport; TIGRFAM: L-lactate transport; PFAM: L-lactate permease; TIGRFAM: L-lactate transport" /codon_start=1 /transl_table=11 /product="L-lactate transport" /protein_id="YP_003828372.1" /db_xref="GI:302392552" /db_xref="GeneID:9513859" /translation="MSLTMSALIATLPIVVVGILMVGFMWSSNKAMPLGFLTAAIIGL VFWDMPMKWVTASTISGVINAFSILLIVFGAILILKTLQGAGAVDSIGASLTGVTKDR RVQVLLIAFLLGSFFEGAAGFGTPAAVGAPLLVGLGFPPLVAAIVALICDSVSVSFGA VGVPIWGGFAALEGVVNLPEGMTFLQFLQNIGVYTAFLHFIVGSFIPLVAVLMTTKIT KGSFKDGLEIWPLALFTGLSYTIPSTIIAYISGPELPALMGSLIAIPIIVFVVSQGWL VPEDEWEFKPQSEWDSSWIGDIEPGDSDVEAEMSAFMAWLPYVLIGLILLVGRLEVFG LTPLLKSVSFGWTEIFGTSAGSTITPFYNPGIFPFIFIAILMPMIYGMKGEKVAKAWK DTFKTLLPAAVALVFTLGMVKIMMNSGPAVGGDSMLVVMAKAAASLTGRLWILLASIA GILGSFISGSATVSDIMFANFQYATALEINAPRTIILALQAIGGAAGNMICIHNVVAA CATVGIVGKEGLIIRKNLFVALAYGLLAGIAAWILITLQPGIF" misc_feature complement(1886541..1888118) /locus_tag="Acear_1802" /note="L-lactate permease; Region: Lactate_perm; cl00701" /db_xref="CDD:186153" gene complement(1888425..1889162) /locus_tag="Acear_1803" /db_xref="GeneID:9513860" CDS complement(1888425..1889162) /locus_tag="Acear_1803" /note="COGs: COG2186 transcriptional regulators; InterPro IPR000524:IPR011991:IPR011711; KEGG: amt:Amet_3750 GntR domain-containing protein; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: A6TUK1 GntR family transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_003828373.1" /db_xref="GI:302392553" /db_xref="GeneID:9513860" /translation="MSIFKPIKNKRIYQQIIEQVRELIADGTLEPGDKLMSERAMAEK LDVSRASIREAFSVLEMLGLIESRPGEGTFITDADSNALIEPLALVLMIDQDNVFELL EIRKIIEVGNAGLAAERATDEKLKEMKEALSLMRKQRSTGEMASDADFKFHFAVAKGT GNKILVKIMHVIADLLYNSIGMNLQQMYKVEGNSEMIIQQHKNIYKNIMEKNVRGAKQ AMYHHLEAAREEILWIIKESNRLKDET" misc_feature complement(1888443..1889156) /locus_tag="Acear_1803" /note="Transcriptional regulators [Transcription]; Region: FadR; COG2186" /db_xref="CDD:32369" misc_feature complement(1888935..1889129) /locus_tag="Acear_1803" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature complement(order(1888944..1888955,1888959..1888964, 1888992..1888994,1889001..1889006,1889010..1889024, 1889046..1889051,1889055..1889057,1889124..1889126)) /locus_tag="Acear_1803" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature complement(1888485..1888865) /locus_tag="Acear_1803" /note="FCD domain; Region: FCD; cl11656" /db_xref="CDD:196275" gene complement(1889342..1890733) /locus_tag="Acear_1804" /db_xref="GeneID:9513861" CDS complement(1889342..1890733) /locus_tag="Acear_1804" /note="COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016167:IPR016168:IPR006094:IPR 004113:IPR016164; KEGG: amt:Amet_0821 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase domain protein; SPTR: C1IB77 Glycolate oxidase subunit; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD" /codon_start=1 /transl_table=11 /product="FAD linked oxidase domain protein" /protein_id="YP_003828374.1" /db_xref="GI:302392554" /db_xref="GeneID:9513861" /translation="MSYNKVTEEDIKCLEEILDSDRVTIKENINEDYAHDELAELKVY PEVMVEPETTEEVSEIMKLASERNIPVTPRGTGTGLCGGAVAMEGGILLLTTAMDEII EIDEENLTAKVQPGVILMSFAEKVNDLGFMYPPDPGEKSATLGGNVLTNAGGMRAVKY GVTRDYVLGMEIVLPNGEVINTGGKVVKNSSGYSIKDLMVSSEGTLGIVTEITLKLIP LPKKQLTLLIPFDSLDEAIDTVPEIINAKIVPTGIEFMEREVLLAATDYLGKGFPETS APAYLLLTFYGNDNEELEKKYEAAADVCLDNDAYDVYIANTEERQDVIWDTRGALLEA LKAVSHLDECDVVVPRNRVAEFVKYTHKLEEKHDLRIRSFGHAGDGNLHIYTLKDDLD EETWHERNKAVMDDMYAKAREMKGQVSGEHGIAYAKKEYLHEDIGKTQVELMKGIKEV FDPQNILNPGKTV" misc_feature complement(1889351..1890556) /locus_tag="Acear_1804" /note="glycolate oxidase, subunit GlcD; Region: glcD; TIGR00387" /db_xref="CDD:129482" misc_feature complement(1890185..1890556) /locus_tag="Acear_1804" /note="FAD binding domain; Region: FAD_binding_4; pfam01565" /db_xref="CDD:190040" gene complement(1890821..1892020) /locus_tag="Acear_1805" /db_xref="GeneID:9513862" CDS complement(1890821..1892020) /locus_tag="Acear_1805" /note="COGs: COG2025 electron transfer flavoprotein alpha subunit; InterProIPR017896:IPR014729:IPR001450:IPR014730:IPR 014731:IPR017900; KEGG: cno:NT01CX_1611 electron transfer flavoprotein alpha-subunit; PFAM: electron transfer flavoprotein alpha/beta-subunit ; 4Fe-4S ferredoxin iron-sulfur binding domain protein; electron transfer flavoprotein alpha subunit; SPTR: C6PWC2 electron transfer flavoprotein alpha/beta-subunit; PFAM: 4Fe-4S binding domain; electron transfer flavoprotein domain; electron transfer flavoprotein FAD-binding domain" /codon_start=1 /transl_table=11 /product="electron transfer flavoprotein alpha/beta-subunit" /protein_id="YP_003828375.1" /db_xref="GI:302392555" /db_xref="GeneID:9513862" /translation="MSNYTIDYANCTLCEECIEACPFDAIEIVDDKVEINAACKACGI CVDTCPEGVIQPVEDEREAVNKDEYSDVLVFAEQLEGEIHPVTYELMGKGRELADKID QELHVILLGHNLTDQTDEILAHGADKVYVYDQEELHHYNVQPYATAIEDCIKRTKPTI VLIGATSIGRSLAPRVATRFRTGLTADCTILDVRENTDLVQTRPAFGGNIMARILTTR HRPQMATMRYKVMEPIPRVENPTGEVVEFSVSKEKLETRAKICEITKKPDVESIEDAD VIVAVGRGIREEKDLEMAQELADLLGGKLGTTRPLIEKGWTEHKQQIGLSGRTVRPEL IITLGISGAVQFVAGMKNSENIFAVNNDPEANIFDVAHYGVVGDLYEVLPRLIEKIKN GENILAS" misc_feature complement(1891940..1892011) /locus_tag="Acear_1805" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" misc_feature complement(1891847..>1891996) /locus_tag="Acear_1805" /note="ferredoxin; Validated; Region: PRK07118" /db_xref="CDD:180852" misc_feature complement(1890845..1891807) /locus_tag="Acear_1805" /note="Electron transfer flavoprotein, alpha subunit [Energy production and conversion]; Region: FixB; COG2025" /db_xref="CDD:32208" misc_feature complement(1891283..1891807) /locus_tag="Acear_1805" /note="The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an...; Region: ETF_alpha; cd01715" /db_xref="CDD:30170" misc_feature complement(1890959..1891207) /locus_tag="Acear_1805" /note="Electron transfer flavoprotein FAD-binding domain; Region: ETF_alpha; pfam00766" /db_xref="CDD:189709" gene complement(1892017..1892811) /locus_tag="Acear_1806" /db_xref="GeneID:9513863" CDS complement(1892017..1892811) /locus_tag="Acear_1806" /note="COGs: COG2086 electron transfer flavoprotein beta subunit; InterPro IPR012255:IPR014729:IPR014730; KEGG: cac:CAC2544 electron-transferring flavoprotein small subunit; PFAM: electron transfer flavoprotein alpha/beta-subunit; SPTR: Q97G28 electron-transferring flavoprotein small subunit; PFAM: electron transfer flavoprotein domain" /codon_start=1 /transl_table=11 /product="electron transfer flavoprotein alpha/beta-subunit" /protein_id="YP_003828376.1" /db_xref="GI:302392556" /db_xref="GeneID:9513863" /translation="MEILVCVKQVPETKDVEVDENGNLIRDGVDSIMNPYDMYALETA LQLKEEHGGTVTAITMGPPQAKEVLKEAYMMGADRGYLLSDIKFAGADVLATSYTLAQ GLEVIGLKDGYDLIICGMESTDGDTAQVGPAIAETLDIPHVAYVSSIEESTKDKIVVE KDMADTIEIVEFSYPGLITVTKHVKQPRLPSYKLKLETQDREINTLTFDDLPDDDETN FGLKGSPTQVEKVFPPDDDIEQVMWDGTGEELSDKMYNELKELKMI" misc_feature complement(1892191..1892808) /locus_tag="Acear_1806" /note="The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an...; Region: ETF_beta; cd01714" /db_xref="CDD:30169" misc_feature complement(order(1892422..1892433,1892446..1892451, 1892455..1892460,1892632..1892634,1892701..1892703, 1892710..1892712,1892791..1892796)) /locus_tag="Acear_1806" /note="Ligand binding site [chemical binding]; other site" /db_xref="CDD:30169" gene complement(1893090..1893605) /locus_tag="Acear_1807" /db_xref="GeneID:9513864" CDS complement(1893090..1893605) /locus_tag="Acear_1807" /note="InterPro IPR019606; KEGG: hor:Hore_15500 hypothetical protein; PFAM: Lipoprotein LpqB, GerMN domain; SPTR: B8CYD0 Putative uncharacterized protein; PFAM: sporulation and spore germination" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="YP_003828377.1" /db_xref="GI:302392557" /db_xref="GeneID:9513864" /translation="MMTDKEKKNYLLIAGITLISVIILFILFTTSQSETKEVKLYFSY NQGQNLKSEVRRVESDQLYVNTIQELIQGPTDKYLGQTLPDGTKLIDFKLRKEVLILN FNSKFRENHWGGSTGEIMTIYSIVNTMAQFPEVKQVQFLIAGTKIESLVGHIDLTDPI GPNDELIEYEN" misc_feature complement(1893156..1893494) /locus_tag="Acear_1807" /note="Sporulation and spore germination; Region: Germane; pfam10646" /db_xref="CDD:151159" gene complement(1893605..1895944) /locus_tag="Acear_1808" /db_xref="GeneID:9513865" CDS complement(1893605..1895944) /locus_tag="Acear_1808" /EC_number="3.5.1.28" /note="COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR012854:IPR002508; KEGG: hor:Hore_15510 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; PRIAM: N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SPTR: B8CYD1 N-acetylmuramoyl-L-alanine amidase; PFAM: Copper amine oxidase N-terminal domain; N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="YP_003828378.1" /db_xref="GI:302392558" /db_xref="GeneID:9513865" /translation="MLIHKRIIMLVILLTLVCYISPVLASSTVSKVFINDRLVRSDLK VKQMGDTLLIPVEILTEGFNLEVDWKNLIKTVNIKYDDKVIKLRAGESKVQVGDRIKE LSSDIRLEKDRVLIPVDFISKILGYKVDWTDNTLQFSKPSGTVKDITYENQKFGEAIK IEITEQLDYEIKQLTAPDRLLIDIYDSKLAEDIDDIAVNNGSIFQIRSGQFNPGVTRV VLDLYQPLDYRTEVINKNGDCQLILKMNSKITGFKYDNNKGLFSISATDELNNYKTEF DKDNKKMIVKFPNMILDVVKDKFVIDNELVKNVNLTQLEKEGIPVIKVIFKMKKWFEL DIEQDSENNNLLLLRPERRVELIDVNYDSQAGEVRIKTEYPVTPQVVPLEKGDRLVAD FPNAVFRDLSQNITIEDEFIEEIRIAQFNKELVRTVIDLEKLVDYELESRVDKETDDY VTVVKLDSPKNLKSQAEKDIAEQETEEKSKQLRAVDITQQNQKTSMQVKLNTDSNYEI RKFNYPDRLVIDIPGAAAALKPTEITEAKGVIKDVRVSQFSRNPMIARVVFELSHAVD YQVVSEEETNEINLQIQATNSNNLNLVGKTIVIDAGHGGADPGAIGAGGTMEKDVNLD VAKKLASLLKEAGAKIRMTRKEDKYVTLWDRANEANELNCDIFVSIHANAHQKKKASG SETYVYPGSYGDNLVLAKKVQGSLHEKLGTPDRGVRFDKFYVLENTTMPSILVEIGFL TNSHEERLLASSSFKQKAAEGMYKGIVDFFSRTGKEEGN" misc_feature complement(1895540..1895800) /locus_tag="Acear_1808" /note="Copper amine oxidase N-terminal domain; Region: Cu_amine_oxidN1; pfam07833" /db_xref="CDD:191865" misc_feature complement(1895279..>1895464) /locus_tag="Acear_1808" /note="Localisation of periplasmic protein complexes; Region: AMIN; pfam11741" /db_xref="CDD:152177" misc_feature complement(1894607..1894876) /locus_tag="Acear_1808" /note="Localisation of periplasmic protein complexes; Region: AMIN; pfam11741" /db_xref="CDD:152177" misc_feature complement(1894211..1894528) /locus_tag="Acear_1808" /note="Localisation of periplasmic protein complexes; Region: AMIN; pfam11741" /db_xref="CDD:152177" misc_feature complement(1893629..1894282) /locus_tag="Acear_1808" /note="N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]; Region: AmiC; COG0860" /db_xref="CDD:31201" misc_feature complement(1893644..1894159) /locus_tag="Acear_1808" /note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino...; Region: MurNAc-LAA; cd02696" /db_xref="CDD:119407" misc_feature complement(order(1893737..1893739,1893932..1893934, 1894091..1894093,1894136..1894138)) /locus_tag="Acear_1808" /note="active site" /db_xref="CDD:119407" misc_feature complement(order(1893932..1893934,1894091..1894093, 1894136..1894138)) /locus_tag="Acear_1808" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:119407" gene complement(1896109..1896276) /locus_tag="Acear_1809" /db_xref="GeneID:9513866" CDS complement(1896109..1896276) /locus_tag="Acear_1809" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828379.1" /db_xref="GI:302392559" /db_xref="GeneID:9513866" /translation="MVCIICGKKISKQKFCNTCEECEEKVDKLSQEILKSHKKLTLRH IKQANIEYNKP" gene complement(1896509..1897066) /locus_tag="Acear_1810" /db_xref="GeneID:9513867" CDS complement(1896509..1897066) /locus_tag="Acear_1810" /note="COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358:IPR005467:IPR003594; KEGG: nth:Nther_0097 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A1HP40 Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="YP_003828380.1" /db_xref="GI:302392560" /db_xref="GeneID:9513867" /translation="MKELSLHILDLVQNSIKAEATEVRIEIIEDLTADKMKILIIDNG QGISEEFLEDVLDPFTTTRTTRKVGLGLPLFQAAAEQCNGELNISSTEGKGTTVEATF QHSHIDRVPLGDIVGTIVTIIQGNPDLDLYYRHVIDNEEFSFVTSDLRDRLQGVPLNK PEVIKFIKEYLSENIEKIKKTEELK" misc_feature complement(1896761..1897045) /locus_tag="Acear_1810" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(1896773..1896775,1896779..1896784, 1896797..1896799,1896803..1896805,1896851..1896862, 1896926..1896931,1896935..1896937,1896941..1896943, 1896947..1896949,1897016..1897018,1897025..1897027, 1897037..1897039)) /locus_tag="Acear_1810" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(1897025..1897027) /locus_tag="Acear_1810" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(1896854..1896856,1896860..1896862, 1896929..1896931,1896935..1896937)) /locus_tag="Acear_1810" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(1897085..1897825) /locus_tag="Acear_1811" /db_xref="GeneID:9513868" CDS complement(1897085..1897825) /locus_tag="Acear_1811" /note="COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR004013:IPR003141:IPR016195; KEGG: cth:Cthe_0337 PHP-like protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: A3DC96 PHP-like protein; PFAM: PHP domain" /codon_start=1 /transl_table=11 /product="PHP domain protein" /protein_id="YP_003828381.1" /db_xref="GI:302392561" /db_xref="GeneID:9513868" /translation="MIEYLADLHVHTVLSPCGDLIMTPQNIIQTAEAKGIDILAITDH NSAENLEVALKLAKSSTVNIIPGMEIETKEEIHLITLFSDLKAVMSFQKLVYSHLPPV DNDEEVFGPQLITDEKDQFIDRIEQLLLISTDLSLEETVAEVEKRGGIIFPAHVDKKE YSILTSLGFIPEEVNFSVLEISKFCSQIELYNKFPTAESYRLIKSSDAHYISDIAPHI KFKLKAPILSEINLAFKGDKDRKVVINK" misc_feature complement(<1897361..1897813) /locus_tag="Acear_1811" /note="Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only]; Region: COG0613" /db_xref="CDD:30958" misc_feature complement(1897604..1897807) /locus_tag="Acear_1811" /note="DNA polymerase alpha chain like domain; Region: POLIIIAc; smart00481" /db_xref="CDD:128757" gene complement(1897839..1898171) /locus_tag="Acear_1812" /db_xref="GeneID:9513869" CDS complement(1897839..1898171) /locus_tag="Acear_1812" /note="KEGG: nth:Nther_0094 HPr kinase; SPTR: A7AED5 Putative uncharacterized protein; PFAM: DRTGG domain" /codon_start=1 /transl_table=11 /product="HPr kinase" /protein_id="YP_003828382.1" /db_xref="GI:302392562" /db_xref="GeneID:9513869" /translation="MELKEIISILDLTVVDRSIELDSEVTGGYSSDLLSHVMGQANPG DLWITIQTHQNIVAVASLIGLAGIIIVDGAELDEETIIKAKEEEIPLLTTELSAYEIA GRLYKLGV" misc_feature complement(1897848..1898159) /locus_tag="Acear_1812" /note="DRTGG domain; Region: DRTGG; cl12147" /db_xref="CDD:196357" gene complement(1898207..1899127) /locus_tag="Acear_1813" /db_xref="GeneID:9513870" CDS complement(1898207..1899127) /locus_tag="Acear_1813" /note="COGs: COG2524 transcriptional regulator protein; InterPro IPR000644:IPR013785:IPR003594; KEGG: dth:DICTH_0761 anti-sigma regulatory factor; PFAM: hypothetical protein; ATP-binding region ATPase domain protein; SMART: hypothetical protein; ATP-binding region ATPase domain protein; SPTR: B5YDL9 Anti-sigma regulatory factor; PFAM: CBS domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /codon_start=1 /transl_table=11 /product="signal transduction protein with CBS domains" /protein_id="YP_003828383.1" /db_xref="GI:302392563" /db_xref="GeneID:9513870" /translation="MQNFTLEFVKQISADLTINDIMTTDVITLHPDNKLKNAKEIMRL RKISGIPIVDQNKRLLGIISIDDIIQGLEYNKLDNKINSLMSTDLITVNNQNNSIGDV LFKFKKYKFGRLPVIDNNNKLVGIITPGDITRKLLSKVKEKISEDSFAENGVRKEDEE ASKEEVQPLELQIEGGNFKKGGNASSRIKKTLQQLEISAAVIRKAAIVIYEAEMNVII HAKRGKVLLEVDQSRIKITVEDSGPGIKDVESAMEPGYSTASEYIRELGFGAGMGLAN IKRYSDELNIDSKVSQGTKIEAEIYLESDD" misc_feature complement(1898732..1899076) /locus_tag="Acear_1813" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature complement(1898726..1899058) /locus_tag="Acear_1813" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair; cl10010" /db_xref="CDD:99705" misc_feature complement(1898240..>1898506) /locus_tag="Acear_1813" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cl00075" /db_xref="CDD:193644" gene complement(1899148..1899489) /locus_tag="Acear_1814" /db_xref="GeneID:9513871" CDS complement(1899148..1899489) /locus_tag="Acear_1814" /note="InterPro IPR010766; KEGG: cpy:Cphy_3800 DRTGG domain-containing protein; PFAM: DRTGG domain protein; SPTR: A1HP46 Putative uncharacterized protein; PFAM: DRTGG domain" /codon_start=1 /transl_table=11 /product="DRTGG domain protein" /protein_id="YP_003828384.1" /db_xref="GI:302392564" /db_xref="GeneID:9513871" /translation="MELKDVKEITESEIIIGEDNLDLEITTACGADLMSDVLAFTVEK TLLLTGLTKLQVIRTADLIDLSAIIFVRGKQPSDEAVKLAQETEIPLLYTDYTLYESC GRLYQAGLGAE" misc_feature complement(1899166..1899477) /locus_tag="Acear_1814" /note="DRTGG domain; Region: DRTGG; cl12147" /db_xref="CDD:196357" gene complement(1899697..1900761) /locus_tag="Acear_1815" /db_xref="GeneID:9513872" CDS complement(1899697..1900761) /locus_tag="Acear_1815" /note="COGs: COG0739 Membrane protein related to metalloendopeptidase; InterProIPR002477:IPR018392:IPR016047:IPR002482:IPR 011055; KEGG: hor:Hore_11020 peptidase M23B; PFAM: peptidase M23; peptidoglycan-binding lysin domain; peptidoglycan-binding domain 1 protein; SMART: peptidoglycan-binding LysM; SPTR: B8CX37 peptidase M23B; PFAM: Putative peptidoglycan binding domain; peptidase family M23; LysM domain" /codon_start=1 /transl_table=11 /product="peptidase M23" /protein_id="YP_003828385.1" /db_xref="GI:302392565" /db_xref="GeneID:9513872" /translation="MNWRRIKVLFPLLVFLILLNIYTVAFASSLGVRDLEVGMRGSDV KLLQQRLNNLGYSIEVDGIFGKETKKIVKKFQEKNDLFSDGIVGTRTIYYLQNKKIDL EYKVEPGDSLYGLAEEYDVSVDAIKQANDLKDSMIRVGQKLIIPDIAIGGGNEKDLYN IIIEYKVRAGDTLSELAKRYNSDISEIKELNNLNGERIRIGQTLKIPRKAQGVEVSRT GSNYHRSEFIWPVKGRISSDYGYRVHPITSERHFHGGVDIAVSPGTVIKAAAPGKVVT SSWVKGFGYTVIIKHKDRIKTLYAHNSRLLVKTGQYVQQGQVISRSGSTGRSTGPHLD FRILLDGEPINPLNKLPSKY" misc_feature complement(1900477..1900644) /locus_tag="Acear_1815" /note="Putative peptidoglycan binding domain; Region: PG_binding_1; pfam01471" /db_xref="CDD:190001" misc_feature complement(1899709..1900455) /locus_tag="Acear_1815" /note="Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane]; Region: NlpD; COG0739" /db_xref="CDD:31082" misc_feature complement(1900324..1900452) /locus_tag="Acear_1815" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1900408..1900410,1900417..1900419, 1900432..1900434,1900441..1900443,1900450..1900452)) /locus_tag="Acear_1815" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature complement(1900141..1900275) /locus_tag="Acear_1815" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1900225..1900227,1900234..1900236, 1900249..1900251,1900258..1900260,1900267..1900269)) /locus_tag="Acear_1815" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature complement(1899724..1900011) /locus_tag="Acear_1815" /note="Peptidase family M23; Region: Peptidase_M23; pfam01551" /db_xref="CDD:190031" gene complement(1900986..1902407) /locus_tag="Acear_1816" /db_xref="GeneID:9513873" CDS complement(1900986..1902407) /locus_tag="Acear_1816" /EC_number="5.3.1.9" /note="COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672:IPR018189; KEGG: hor:Hore_19060 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); SPTR: B8CZD5 Glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate isomerase" /protein_id="YP_003828386.1" /db_xref="GI:302392566" /db_xref="GeneID:9513873" /translation="MSKPRYQQKEWQKEMKIRLDVNNMFASQVGEEHGFTPEDIEELE EELQTAHEAIREAKEEGELGFMELPETQKDVARRIKESAAEKRKEFDNFVVLGIGGSA LGAKALRTAFTHSYKQEVPRLFVSDNVDPANFKELLEALDLEKTVFNVISKSGGTAET MSQFLIARDLVAKELGIDKVAEHFIATTSKDSGKLIEIAQREGIETFYIPENVGGRFS VLTPVGLLPAAFCGIDIEELLAGAEYMDRICAVDDVWKNPAYLNATLQYLADQDGKNI SVMMPYVDKLKDVADWYRQLWAESLGKEKDRDGKVVNVGPTPVKALGTTDQHSQVQLY MAGPYDKVITFLTVDAYGAEVEIPQEYSDIEEVSYLGGHILNDLITTEQTATELALTK NQRLNTTITLPEVNEFTVGQLFYMFELQTAFAGELYGINAFNQPGVELGKNYTYGILG RQGYEERKEEYEAKAPKDDGLII" misc_feature complement(1901061..1902365) /locus_tag="Acear_1816" /note="glucose-6-phosphate isomerase; Provisional; Region: PRK00973" /db_xref="CDD:179193" misc_feature complement(1901715..1902191) /locus_tag="Acear_1816" /note="Phosphoglucose isomerase (PGI) contains two SIS (Sugar ISomerase) domains. This classification is based on the alignment of the first SIS domain. PGI is a multifunctional enzyme which as an intracellular dimer catalyzes the reversible isomerization of...; Region: SIS_PGI_1; cd05015" /db_xref="CDD:88410" misc_feature complement(order(1901763..1901765,1901937..1901939, 1901946..1901954,1902105..1902110,1902114..1902116)) /locus_tag="Acear_1816" /note="active site" /db_xref="CDD:88410" misc_feature complement(order(1901910..1901912,1901919..1901921, 1901931..1901933,1902018..1902029)) /locus_tag="Acear_1816" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:88410" misc_feature complement(1901064..1901585) /locus_tag="Acear_1816" /note="Phosphoglucose isomerase (PGI) contains two SIS (Sugar ISomerase) domains. This classification is based on the alignment of the second SIS domain. PGI is a multifunctional enzyme which as an intracellular dimer catalyzes the reversible isomerization of...; Region: SIS_PGI_2; cd05016" /db_xref="CDD:88411" misc_feature complement(order(1901247..1901249,1901256..1901258, 1901277..1901279,1901283..1901285,1901400..1901402, 1901409..1901414,1901421..1901426,1901433..1901441, 1901445..1901447,1901499..1901504,1901511..1901513, 1901523..1901525,1901559..1901561,1901583..1901585)) /locus_tag="Acear_1816" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:88411" misc_feature complement(order(1901511..1901513,1901523..1901525)) /locus_tag="Acear_1816" /note="active site" /db_xref="CDD:88411" gene 1902664..1903086 /locus_tag="Acear_1817" /db_xref="GeneID:9513874" CDS 1902664..1903086 /locus_tag="Acear_1817" /note="KEGG: antiviral protein ski2 ; K12599 antiviral helicase SKI2" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828387.1" /db_xref="GI:302392567" /db_xref="GeneID:9513874" /translation="MVHNKKTNTAKTDNWFKTVEQKTTEKNNNKINKNNQTDIRKEQK SNHSPNFKQELINHRDQFLHVIAHNNQKSDSFQGILARIEADFITLINTPTVIKIPIK KITAIITNPKQVPASTLSAKEIKPIIKEVLETLFDLDI" gene complement(1903132..1903359) /locus_tag="Acear_1818" /db_xref="GeneID:9513875" CDS complement(1903132..1903359) /locus_tag="Acear_1818" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828388.1" /db_xref="GI:302392568" /db_xref="GeneID:9513875" /translation="MNYDFVEGLEDQVGDSIAVIINAGEGCCLHQGILCQVGVDFVTL VDGDERIEVPFESIAAIKKQACGAADERMDP" gene complement(1903383..1903628) /locus_tag="Acear_1819" /db_xref="GeneID:9513876" CDS complement(1903383..1903628) /locus_tag="Acear_1819" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828389.1" /db_xref="GI:302392569" /db_xref="GeneID:9513876" /translation="MTFEEQLQAQIGDFMTVIIKAGGNCCKHRGILCSIRDDFIVLVH DDERIEIPISQIAAVRKLAGGASEEDYYDDDCYDDWK" gene 1903952..1905610 /locus_tag="Acear_1820" /db_xref="GeneID:9513877" CDS 1903952..1905610 /locus_tag="Acear_1820" /note="COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit; InterPro IPR008040:IPR002821; KEGG: hor:Hore_22450 N-methylhydantoinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; SPTR: B8D0Q4 N-methylhydantoinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region" /codon_start=1 /transl_table=11 /product="Hydantoinase/oxoprolinase" /protein_id="YP_003828390.1" /db_xref="GI:302392570" /db_xref="GeneID:9513877" /translation="MQLGIDIGGTHTDGVLLDQNNQLLKHNKLPTQPQDLTKTILTSC QQLTSNLTTKQLDRLVLSTTLATNLIVKEEYRAAGLLLIPGPGLNPDWYSYSPHAKIL SGSIDHRGREVKSIDEAEIKQAIAGFIKNEVLNIGICGKFSTRNPEHELKIKEIIEDD FSEVENITLSHKLSGKLNYPRRVATTYLNTGVQTEQNRFISDIQTGLNKLNLEAPVYI LKADGGTMSLQEAKNAPIKSINSGPAASIMGIFGLTEPSETSLGLDIGGTTTDISLFI GQEPIFKPKGITINDYKTSVRGLYNQSIGAGGDSLIQIKNGNLKIGPQRKGPAAAFGG PAPTPTDALVILGLTNSGDKEKATASLKPLAEEMNLSIQKLADRIITEFCSQIQNKIN QMLTKLNNQPVYTINKLLTNNRIRPTKITGIGGPAKAIIPKLADRLNLNYEVPNYSPV ANAIGAALARTTRECTLYADTSRDYYNIPELGIEEKITAEFNLKKAERIAKQKLKANL KNQTPEIEITNNQAFNLVRGFNTTGQIIEVTAQVKPGRRKLNAN" misc_feature 1903958..1904428 /locus_tag="Acear_1820" /note="Hydantoinase/oxoprolinase N-terminal region; Region: Hydant_A_N; pfam05378" /db_xref="CDD:147519" misc_feature 1904495..1905343 /locus_tag="Acear_1820" /note="Hydantoinase/oxoprolinase; Region: Hydantoinase_A; cl00668" /db_xref="CDD:163895" gene 1905600..1906940 /locus_tag="Acear_1821" /db_xref="GeneID:9513878" CDS 1905600..1906940 /locus_tag="Acear_1821" /note="COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: hor:Hore_22480 histone deacetylase superfamily; PFAM: histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: B8D0Q7 Histone deacetylase superfamily; PFAM: Histone deacetylase domain" /codon_start=1 /transl_table=11 /product="Histone deacetylase" /protein_id="YP_003828391.1" /db_xref="GI:302392571" /db_xref="GeneID:9513878" /translation="MQIKAKNNLGLIFFPAFDWSISPTHPEREERLLYTKDQVLEEGL LDIEGIKEYNPLVATEDDVNRTHICIPDAKSIISKPHLISAGGAIKAAELVMQKEVDK AFAIIRPPGHHAFRVVHGARGFCTINNEAIMVEYLRNKYDSDLKIAFVDTDAHHADGT QNIYYNDPNILHISIHQDGRTLFPGTGFTDELGGPGAWGRTINLPLPTNTTDQGLHYA LDNLILPILDDFDPDLIINAAGQDNHYSDPLTRMNITAQGYAELNDKLDPDLAILQGG YSIESALPYINTGIMLAMAGLDYSYIQEPDYDPTVKEQPAKITDTIKQRTNKLITSWQ KRDKIDLQDEFPIKNINGEDYHINHRNIFYDTSQLREEQEIKIKICDDCSGVMIIDSQ VRPHSMGETRSIILPFDVCNECRQLGYDKYEASKQDFSAVYLQDKVGDKLLTNL" misc_feature 1905645..1906484 /locus_tag="Acear_1821" /note="Histone deacetylase domain; Region: Hist_deacetyl; cl02986" /db_xref="CDD:194501" gene complement(1907003..1908280) /locus_tag="Acear_1822" /pseudo /db_xref="GeneID:9513879" gene complement(1908661..1909203) /locus_tag="Acear_1823" /db_xref="GeneID:9513880" CDS complement(1908661..1909203) /locus_tag="Acear_1823" /note="COGs: COG3030 protein affecting phage T7 exclusion by the F plasmid; InterPro IPR007313; KEGG: nth:Nther_0552 FxsA cytoplasmic membrane protein; PFAM: FxsA cytoplasmic membrane protein; SPTR: B2A6D7 FxsA cytoplasmic membrane protein; PFAM: FxsA cytoplasmic membrane protein" /codon_start=1 /transl_table=11 /product="FxsA cytoplasmic membrane protein" /protein_id="YP_003828392.1" /db_xref="GI:302392572" /db_xref="GeneID:9513880" /translation="MFIRLLLLFTIVPILELALLIQLGSYVGLLPTIGLIAVTGVVGA SLARSQGFLVVNQIRNKLAAGSLPADSLIEGLLILIGGGLLLTPGLLTDITGFSLIIP LTRKAIRRLVKKTLKKQIDKGNIQFSFFGGNKGNSDSQQYNWQQTDEEDDWDNLSESI DVNYEEVDDESKEDNDDNKA" misc_feature complement(1908835..1909188) /locus_tag="Acear_1823" /note="FxsA cytoplasmic membrane protein; Region: FxsA; cl01148" /db_xref="CDD:186358" gene complement(1909298..1910035) /locus_tag="Acear_1824" /db_xref="GeneID:9513881" CDS complement(1909298..1910035) /locus_tag="Acear_1824" /EC_number="1.4.1.13" /note="COGs: COG0070 glutamate synthase domain 3; InterPro IPR012061:IPR002489; KEGG: hor:Hore_16290 glutamate synthase (NADPH) GltB3 subunit; PFAM: glutamate synthase alpha subunit domain protein; SPTR: B8CYK9 glutamate synthase (NADPH) GltB3 subunit; PFAM: GXGXG motif" /codon_start=1 /transl_table=11 /product="glutamate synthase (NADPH) GltB3 subunit" /protein_id="YP_003828393.1" /db_xref="GI:302392573" /db_xref="GeneID:9513881" /translation="MATIDAAGVYYKELNKEVKELLKSGETEITLDNVNGQRYIGDGL ESNAKLIINGTPGNDLAAFTNGVEIVVNGNGQDGIANTMNGGKLVINGQTGDTLGYSM RGGEVYVRDSVGYRVGIHMKGYQDKQPTIIVGGTAGDFFGEYMAGGRLILLGLDRQAD EPIIGNHVAVGMHGGVIYIRDEIEDYLTGLEVKVTEATPADRQEIRNSLTDYCQQFNL DLEEIMEAKFSKLIPVSHRPYGNMYAY" misc_feature complement(1909331..1910032) /locus_tag="Acear_1824" /note="Archaeal-type gltB domain. This domain shares sequence similarity with a region of unknown function found in the large subunit of glutamate synthase, which is encoded by gltB and found in most bacteria and eukaryotes. It is predicted to be homologous...; Region: arch_gltB; cd00981" /db_xref="CDD:29610" misc_feature complement(order(1909517..1909519,1909526..1909528, 1909535..1909537,1909598..1909600,1909604..1909609, 1909619..1909630,1909670..1909672,1909676..1909681, 1909688..1909702,1909727..1909729,1909736..1909738, 1909745..1909747,1909754..1909759,1909784..1909786, 1909793..1909795,1909808..1909816,1909847..1909849, 1909859..1909864,1909871..1909873,1909931..1909936)) /locus_tag="Acear_1824" /note="putative subunit interface; other site" /db_xref="CDD:29610" gene complement(1910053..1911312) /locus_tag="Acear_1825" /db_xref="GeneID:9513882" CDS complement(1910053..1911312) /locus_tag="Acear_1825" /note="COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027:IPR016040; KEGG: ate:Athe_2358 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B9MN97 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase" /codon_start=1 /transl_table=11 /product="FAD-dependent pyridine nucleotide-disulfide oxidoreductase" /protein_id="YP_003828394.1" /db_xref="GI:302392574" /db_xref="GeneID:9513882" /translation="MDYVIIGNSAAGVGAIEGIREIDAASRVTVISDEPYHTYSRPLI SYYLADKVDWEQMKFRSDDFYAENNVETKLGVKATGINEAANSVNLANGEEVGFDKLL VATGGTPFIPPLEGINKDNIYNFIKVDDAESIAGEIKDLETGKVVILGAGLIGLKAAE ALVKQGLEVTVVELADQVLSAILDKEAAKLVQQHLEAKGINFIFEDTIAEFLGGEKVT GVKLESEQKLDCDLAVVAVGVRPNTEIVKETDIEVNQGIIVNDRLETNTEDIYAAGDV AEGEDLVRKMKSVVPIWPDAYNQGRTAGMNMAGVAEKYAESFPRNSIGFFGLPMITAG IINPDGKEYEVLVTKDEDKKVYKKIVLRDDRIVGFIYLNDIDRAGILIDLIKEEKNIA EVKDQLLSDDFGYLSFDKGWRQERLAK" misc_feature complement(<1910116..1911303) /locus_tag="Acear_1825" /note="NAD(P)H-nitrite reductase [Energy production and conversion]; Region: NirB; COG1251" /db_xref="CDD:31443" misc_feature complement(1910632..1910880) /locus_tag="Acear_1825" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" gene complement(1911325..1911771) /locus_tag="Acear_1826" /db_xref="GeneID:9513883" CDS complement(1911325..1911771) /locus_tag="Acear_1826" /note="COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896:IPR001450; KEGG: tex:Teth514_0560 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C7ITL7 4Fe-4S ferredoxin iron-sulfur binding domain protein" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003828395.1" /db_xref="GI:302392575" /db_xref="GeneID:9513883" /translation="MKRVYAKEEYCLGCRLCEVYCVTNHSESQDIIKAHKLEKITPRV VIESKGVLSLALQCRHCEEADCTRACITGALQKDPKTGEITYDQDKCVGCWTCIMACS YGVIQRDEAGQKVISKCDLCGEEEESEPACVTNCPNGALVFEDRGE" misc_feature complement(<1911349..1911762) /locus_tag="Acear_1826" /note="putative oxidoreductase Fe-S binding subunit; Reviewed; Region: PRK12769" /db_xref="CDD:183733" gene complement(1911808..1913310) /locus_tag="Acear_1827" /db_xref="GeneID:9513884" CDS complement(1911808..1913310) /locus_tag="Acear_1827" /EC_number="1.4.1.13" /note="COGs: COG0069 glutamate synthase domain 2; InterProIPR017896:IPR013785:IPR001450:IPR002932:IPR 017900; KEGG: hor:Hore_16300 glutamate synthase (NADPH); PFAM: ferredoxin-dependent glutamate synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: glutamate synthase (NADPH); SPTR: B8CYL0 glutamate synthase (NADPH); PFAM: Conserved region in glutamate synthase" /codon_start=1 /transl_table=11 /product="glutamate synthase (NADPH) GltB2 subunit" /protein_id="YP_003828396.1" /db_xref="GI:302392576" /db_xref="GeneID:9513884" /translation="MSLNLKNPEFIVERNMDKCIECQVCERQCANEVHWYDEDLEKMR AEDINCVNCHRCVALCPTNALVIKEYPLEYKQNSNWTEEMITNIQKQADTGGILLTGM GNPTDKKIYWDHILLNASQVTNPSIDPLREPMELKTYLGRKPDQIEFNEEGEVEDLPP QLELETPIMFGAMSFGSISINACKALAQAASEMGMMYNTGEGGLHEDLYQYRDNTIVQ VASGRFGVHQEYLNAGAAIEIKIGQGAKPGIGGHLPGEKVGKEVSETRMIPEGSDALS PAPHHDIYSIEDLRQLIYALKEATDYEKPVSVKISAVHNVAAIAAGIATAGADIIAID GYRGGTGAAPTMIRDNVGIPIELALAAVDDRLREERLRNNVSLVVSGSIRNSADIVKA VALGADAVYVSSAALVALGCHMCQKCYTGKCNWGIATQEPELVKRLNPELGVKRVKNL IEGWSHEIKEILGGMGINALESLRGNRLMLRGMDLTEKELDILGIKHAGE" misc_feature complement(<1913101..>1913262) /locus_tag="Acear_1827" /note="The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (ACS), and carbon monoxide dehydrogenase (CODH), all of which contain [Fe4-S4] metal clusters at their active sites. These proteins have a conserved alpha-; Region: HCP_like; cl14655" /db_xref="CDD:187409" misc_feature complement(1913119..1913259) /locus_tag="Acear_1827" /note="4Fe-4S dicluster domain; Region: Fer4_7; pfam12838" /db_xref="CDD:193313" misc_feature complement(1911874..1913007) /locus_tag="Acear_1827" /note="Glutamate synthase (GltS) FMN-binding domain. GltS is a complex iron-sulfur flavoprotein that catalyzes the reductive synthesis of L-glutamate from 2-oxoglutarate and L-glutamine via intramolecular channelling of ammonia, a reaction in the plant...; Region: GltS_FMN; cd02808" /db_xref="CDD:73370" misc_feature complement(1911907..1912986) /locus_tag="Acear_1827" /note="Conserved region in glutamate synthase; Region: Glu_synthase; pfam01645" /db_xref="CDD:110632" misc_feature complement(order(1912042..1912044,1912057..1912059, 1912075..1912077,1912099..1912104,1912165..1912167, 1912171..1912173,1912288..1912296,1912384..1912386, 1912513..1912515,1912573..1912575,1912591..1912593, 1912657..1912659,1912708..1912710,1912789..1912800)) /locus_tag="Acear_1827" /note="active site" /db_xref="CDD:73370" misc_feature complement(order(1912099..1912104,1912165..1912167, 1912171..1912173,1912291..1912296,1912384..1912386, 1912591..1912593,1912657..1912659,1912708..1912710, 1912789..1912800)) /locus_tag="Acear_1827" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73370" misc_feature complement(order(1912288..1912293,1912513..1912515, 1912573..1912575)) /locus_tag="Acear_1827" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73370" misc_feature complement(order(1912042..1912044,1912057..1912059, 1912075..1912077)) /locus_tag="Acear_1827" /note="3Fe-4S cluster binding site [ion binding]; other site" /db_xref="CDD:73370" gene complement(1913307..1914404) /locus_tag="Acear_1828" /db_xref="GeneID:9513885" CDS complement(1913307..1914404) /locus_tag="Acear_1828" /EC_number="1.4.1.13" /note="COGs: COG0067 glutamate synthase domain 1; InterPro IPR017932:IPR012375:IPR000583; KEGG: hor:Hore_16310 glutamate synthase (NADPH) GltB1 subunit; PFAM: glutamine amidotransferase class-II; SPTR: B8CYL1 glutamate synthase (NADPH) GltB1 subunit; PFAM: glutamine amidotransferases class-II" /codon_start=1 /transl_table=11 /product="glutamate synthase (NADPH) GltB1 subunit" /protein_id="YP_003828397.1" /db_xref="GI:302392577" /db_xref="GeneID:9513885" /translation="MRGSRPQEKIMSGCAISGILNRKGNRFSGAEIMESIALMHERSN GLGGGFAAYGIYPEYEDKYAVHMFYDDLTAKEEADHFLNRHFSITISEKIPTREVEVI NNPPIIWRYFVEPDQQKLTSAGLTEDEYVAQCVMNINANYRGAFVVSSGKNMGVFKGV GYPEDIGEFYQLEEYKAYLWTAHGRFPTNTPGWWGGAHPFTLLDWSIVHNGEISSYGA NKRYLEMFGYECAMQTDTEAITYLFDLMLRKHDLPLEAAVKAVAAPLWSEIERMDEKE AKIAKTIRTVYSSALLNGPFSVILGHKDGFIALNDRIKLRPLVVAKDDERTYVASEES AIRQICSNPKEIRTPKGGEAVIGLLEGRQGV" misc_feature complement(<1914240..1914365) /locus_tag="Acear_1828" /note="Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. This domain is related to...; Region: Gn_AT_II; cl00319" /db_xref="CDD:153682" misc_feature complement(1913334..1913984) /locus_tag="Acear_1828" /note="Glutamine amidotransferases class-II (Gn-AT)_GlxB-type. GlxB is a glutamine amidotransferase-like protein of unknown function found in bacteria and archaea. GlxB has a structural fold similar to that of other class II glutamine amidotransferases...; Region: GlxB; cd01907" /db_xref="CDD:73286" misc_feature complement(order(1913700..1913702,1913772..1913777, 1913847..1913852)) /locus_tag="Acear_1828" /note="putative active site [active]" /db_xref="CDD:73286" gene complement(1914555..1914893) /locus_tag="Acear_1829" /db_xref="GeneID:9513886" CDS complement(1914555..1914893) /locus_tag="Acear_1829" /note="COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187:IPR015867:IPR017918:IPR011322; KEGG: npu:Npun_F4466 nitrogen regulatory protein P-II, GlnB; PFAM: nitrogen regulatory protein P-II; SPTR: O30794 Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II" /codon_start=1 /transl_table=11 /product="nitrogen regulatory protein P-II" /protein_id="YP_003828398.1" /db_xref="GI:302392578" /db_xref="GeneID:9513886" /translation="MKKVECIIRPEKLEELVVAVEQLGISGLNITQIAGYGNQKGQTD TYRGVEYEVKFKEKLKVEIVVDEEKVEDLVDKILSAARTGEVGDGKIFIYSIEEAVRI RTKEVGKEAI" misc_feature complement(1914582..1914884) /locus_tag="Acear_1829" /note="Nitrogen regulatory protein P-II; Region: P-II; cl00412" /db_xref="CDD:193807" gene complement(1914912..1916246) /locus_tag="Acear_1830" /db_xref="GeneID:9513887" CDS complement(1914912..1916246) /locus_tag="Acear_1830" /note="COGs: COG0004 Ammonia permease; InterPro IPR001905:IPR018047; KEGG: pmo:Pmob_1796 ammonium transporter; PFAM: ammonium transporter; SPTR: A9BIZ7 Ammonium transporter; TIGRFAM: ammonium transporter; PFAM: Ammonium transporter Family; TIGRFAM: ammonium transporter" /codon_start=1 /transl_table=11 /product="ammonium transporter" /protein_id="YP_003828399.1" /db_xref="GI:302392579" /db_xref="GeneID:9513887" /translation="MSRRVALLMLLVLMVVLLSPTALAATTAESNAVAIDTTWTLLAA FLVFFMQAGFAMVEAGFTRAKNAGNIIMKNIMDVSIGAVVYWICGFAFMFGVGNSFIG LDGFFLNGSYEHLGLNIPLEAFWVFQSVFAATAATIVSGAAAERTKYTGYLIYSIVIS GVIYPVVGHWIWGGGWLSNMIDFAGSTVVHSVGGWAALAAAIVLGPRLGKYNKDGSAN ALPGHNLLMAALGVFILWFGWFGFNTGSTVAGTDLSIGSIAVTTNLAAAAGVVLAMLT SWIKYGKADVSMTLNGALAGLVGITAGTAAVDNVGAVIIGALSGILVVYAVELIDKLQ ADDPVGAVAVHGVCGAFGTLMVGLLATDGGLFYGGGLNLLLTQAKGVISVAVWTFSTS YILFKAVDLTIGMRVSEEEEKRGLDLTEHNSVSYPDFVPLHAKKSIKVSKQE" misc_feature complement(1914960..1916147) /locus_tag="Acear_1830" /note="Ammonium Transporter Family; Region: Ammonium_transp; cl03012" /db_xref="CDD:194508" gene complement(1916379..1917713) /locus_tag="Acear_1831" /db_xref="GeneID:9513888" CDS complement(1916379..1917713) /locus_tag="Acear_1831" /EC_number="6.3.1.2" /note="COGs: COG0174 glutamine synthetase; InterPro IPR004809:IPR014746:IPR008147:IPR008146; KEGG: hor:Hore_21290 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: B8D022 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic domain; glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I" /codon_start=1 /transl_table=11 /product="L-glutamine synthetase" /protein_id="YP_003828400.1" /db_xref="GI:302392580" /db_xref="GeneID:9513888" /translation="MSSMTKEDVLQKAEELDVKFIRLQFTDILGVVKNVAITVDQLEE ALEGEIMFDGSSIDGFTRIQESDMYLKPDFNTFTIFPWRPEAGGTVARLVCDVYNPND EAFAGGPRNVLKKVLKEAEEMGYTMNVGPEPEFFLFEKTEDGRATIETHDQGGYFDLG PVDLGNDVRREIVLTLEKMGFEVEASHHEVAPGQHEIDFKYEEALRTADNIATFKFVV KSIANQYDVHATFMPKPIFGENGSGMHVHQSLFEGSENAFYDESDELGLSQTAKYYIG GLLKHAQALAAITNPTVNSYKRLVPGYEAPVYQAWSSANRSALIRIPSASGVGTRLEL RNPDPTANPYLAIAVMLKAGLDGIKNEIEPPTEVVENIYDMTAEEKEELGIESLPVNI NQAVQELLADEVIQDALGDHVLKHFVEAKQIEWDDYRTSVHQWELDNYLETF" misc_feature complement(1916391..1917695) /locus_tag="Acear_1831" /note="glutamine synthetase, type I; Region: GlnA; TIGR00653" /db_xref="CDD:161979" misc_feature complement(1917414..1917665) /locus_tag="Acear_1831" /note="Glutamine synthetase, beta-Grasp domain; Region: Gln-synt_N; pfam03951" /db_xref="CDD:146534" misc_feature complement(1916652..1917389) /locus_tag="Acear_1831" /note="Glutamine synthetase, catalytic domain; Region: Gln-synt_C; pfam00120" /db_xref="CDD:189401" gene complement(1917864..1918586) /locus_tag="Acear_1832" /db_xref="GeneID:9513889" CDS complement(1917864..1918586) /locus_tag="Acear_1832" /EC_number="6.3.1.5" /note="COGs: COG0171 NAD synthase; InterPro IPR003694:IPR014729; KEGG: hor:Hore_19030 NH(3)-dependent NAD(+) synthetase; PFAM: NAD synthase; SPTR: B8CZD2 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; TIGRFAM: NAD+ synthetase" /codon_start=1 /transl_table=11 /product="NH(3)-dependent NAD(+) synthetase" /protein_id="YP_003828401.1" /db_xref="GI:302392581" /db_xref="GeneID:9513889" /translation="MLDKNYQKVIYKLQNWIQDKVESAGCQGAVVGLSGGIDSSVTAV LSKMAFPKRTLGLIMPCESNSQDRRDAQLVADEFDIDYEIVDLNNTLNTLLSAVDNFD DKMPKANIKPRLRMTVLYYYGQLRNSLVIGTDNRSELKLGYFTKHGDGGIDLAPMGNL VKTEVREVAKLLEIPNRIINKAPSAGLWADQTDESELGLSYEEIDRYILTGEADEQVK RKVESLAEENSHKLQLPPIPEF" misc_feature complement(1917894..1918577) /locus_tag="Acear_1832" /note="NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD). The conversion of NaAD to...; Region: NAD_synthase; cd00553" /db_xref="CDD:30166" misc_feature complement(1917879..1918574) /locus_tag="Acear_1832" /note="NAD+ synthetase; Region: nadE; TIGR00552" /db_xref="CDD:161924" misc_feature complement(order(1917897..1917899,1918110..1918115, 1918122..1918139,1918146..1918151,1918212..1918217, 1918221..1918229,1918233..1918241,1918245..1918250, 1918257..1918259,1918269..1918271,1918311..1918316, 1918323..1918328,1918335..1918346,1918527..1918532, 1918539..1918541,1918548..1918553)) /locus_tag="Acear_1832" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:30166" misc_feature complement(order(1917894..1917899,1917999..1918001, 1918026..1918028,1918032..1918037,1918140..1918142, 1918149..1918160,1918173..1918175,1918188..1918190, 1918242..1918244,1918248..1918253,1918260..1918262, 1918272..1918274,1918410..1918418,1918470..1918472, 1918485..1918496)) /locus_tag="Acear_1832" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:30166" misc_feature complement(order(1918035..1918040,1918101..1918103, 1918188..1918190,1918242..1918244,1918410..1918415, 1918470..1918475,1918485..1918493)) /locus_tag="Acear_1832" /note="ATP binding pocket [chemical binding]; other site" /db_xref="CDD:30166" misc_feature complement(order(1918035..1918037,1918173..1918175, 1918473..1918475,1918485..1918487)) /locus_tag="Acear_1832" /note="Mg binding site [ion binding]; other site" /db_xref="CDD:30166" misc_feature complement(order(1917996..1918019,1918026..1918049, 1918392..1918394)) /locus_tag="Acear_1832" /note="active-site loop [active]" /db_xref="CDD:30166" gene complement(1918629..1918781) /locus_tag="Acear_1833" /db_xref="GeneID:9513890" CDS complement(1918629..1918781) /locus_tag="Acear_1833" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828402.1" /db_xref="GI:302392582" /db_xref="GeneID:9513890" /translation="MCCTTNGQKELGRRKMYDRRRSGIGKLYHQKMRDRNKPIFHQLA TECNCG" gene complement(1918982..1920823) /locus_tag="Acear_1834" /db_xref="GeneID:9513891" CDS complement(1918982..1920823) /locus_tag="Acear_1834" /EC_number="6.3.5.4" /note="COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterProIPR017932:IPR006426:IPR014729:IPR000583:IPR 001962; KEGG: mta:Moth_1299 asparagine synthase, glutamine-hydrolyzing; PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: Q2RIX6 Asparagine synthase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)" /codon_start=1 /transl_table=11 /product="asparagine synthase (glutamine-hydrolyzing)" /protein_id="YP_003828403.1" /db_xref="GI:302392583" /db_xref="GeneID:9513891" /translation="MCGIAGWIDWKVNMNQQRSIVEEMGKTLECRGPDEKGAWFTENV GFAHRRLIVIDPEGGKQPMIKKHQGNTYVITYNGELYNTQELRRRLKTKGYEFNSHSD TEVLLTSYIEWGEECVKHLNGIFAFGIWDQKRESLYLARDRIGVKPLFYTQQQDRLIF GSELKALLAHPDIEAEIDTDGLGQIFVMGPARTPGNGVFCGIDEVKPGHYLVYDRDGL RKCQYWNLESKQHTDTAEETVHRVRELFVDTVERQLVSDVPICTLLSGGLDSSAITAV ASKALQEAGKGQLHTYSVDYEGNDEHFESNEFQPDADNVWVERVSNYLGTKHHSVILD NSRLAEMLPAGVTARDLPGMADIDTSLYLFSRAIKEDFTVAVSGECADEIFGGYPWYH REEALQADTFPWSRNLEDRVRLLDNNLAARIKPQEYMQAKYQQALEEVPRLPGEEGKN ARMREMFYLNLTRWMPTLLDRKDRMSMLTGLEIRVPFCDHRLVEYVWNIPWSMKNYGG NRKGILREALKGILPEDVRLRPKNPYPKTFNPDYFAAVRDWLLEILDTPNAPLLELID VAAVRKLTKADQDFDIPWFGQLMRLPQLFAYLIQVNTWLEEYNVSIK" misc_feature complement(1920149..1920820) /locus_tag="Acear_1834" /note="Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine synthetase B catalyses the ATP-dependent conversion of aspartate to asparagine. This enzyme is a homodimer, with each monomer composed of a glutaminase domain and a...; Region: AsnB; cd00712" /db_xref="CDD:48476" misc_feature complement(order(1920518..1920520,1920587..1920595, 1920674..1920676,1920818..1920820)) /locus_tag="Acear_1834" /note="active site" /db_xref="CDD:48476" misc_feature complement(1919222..1920814) /locus_tag="Acear_1834" /note="asparagine synthase (glutamine-hydrolyzing); Region: asn_synth_AEB; TIGR01536" /db_xref="CDD:188154" misc_feature complement(order(1920677..1920679,1920716..1920730, 1920737..1920739,1920746..1920748,1920770..1920772)) /locus_tag="Acear_1834" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48476" misc_feature complement(1919219..1920097) /locus_tag="Acear_1834" /note="The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes...; Region: Asn_Synthase_B_C; cd01991" /db_xref="CDD:30178" misc_feature complement(order(1919687..1919695,1919732..1919734, 1919936..1919944,1920029..1920037)) /locus_tag="Acear_1834" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30178" misc_feature complement(order(1919687..1919695,1919732..1919734, 1919936..1919944,1920029..1920037)) /locus_tag="Acear_1834" /note="Molecular Tunnel; other site" /db_xref="CDD:30178" gene 1921010..1921963 /locus_tag="Acear_1835" /db_xref="GeneID:9513892" CDS 1921010..1921963 /locus_tag="Acear_1835" /EC_number="1.1.1.95" /note="COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006139:IPR006140; KEGG: cno:NT01CX_0601 D-isomer specific 2-hydroxyacid dehydrogenases; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; PRIAM: phosphoglycerate dehydrogenase; SPTR: C5VNM2 Putative glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain" /codon_start=1 /transl_table=11 /product="phosphoglycerate dehydrogenase" /protein_id="YP_003828404.1" /db_xref="GI:302392584" /db_xref="GeneID:9513892" /translation="MKIVMLEPLAVKEEIINELKANLEEQDHEFVAYDNRIEDEDVII DRASEADALIITNLPLSERVIEACSNLKLISVAFTGVDHIDLEACQKQGVTVCNAPGY STHSVAELAIGFMITVMRNMVPCDVATRKGKTRTGLIGNELKGKKLGIIGTGSIGLRV AEIGKVFGCELLGYNRSEKEQAKELGLEYVNLDTLMKESDIISLHLPHTEETKGMIDK EKISLMKESSIFINVARGPIVDNEALAAALKEGHIAGAGIDVFEMEPPIPQDHPLLNA PNTVVTPHVAFATPEAFYRRANTVFDNIESWLQDNPQNVMN" misc_feature 1921010..1921951 /locus_tag="Acear_1835" /note="Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]; Region: LdhA; COG1052" /db_xref="CDD:31252" misc_feature 1921343..1921867 /locus_tag="Acear_1835" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" gene complement(1922017..1923564) /locus_tag="Acear_1836" /db_xref="GeneID:9513893" CDS complement(1922017..1923564) /locus_tag="Acear_1836" /note="COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108:IPR011059; KEGG: nth:Nther_1904 amidohydrolase 3; PFAM: amidohydrolase; SPTR: B2A658 amidohydrolase; PFAM: Amidohydrolase family" /codon_start=1 /transl_table=11 /product="amidohydrolase" /protein_id="YP_003828405.1" /db_xref="GI:302392585" /db_xref="GeneID:9513893" /translation="MKTLADLILYNGKIITLDGTDRIVEAVAVNKEEIIAVGTNEEIK EFMTDNTQQLNLEGKTVVPGFIDSHVHFVQTGLNKLFLNFTGVDSREEMLNLIKNRAQ KLPAGEWIYGVGFDEENFADPQPPTRWQLDKLVPDNPAWFSRVDCHSCVVNSKALQLL NMPRNILGLDRDRKGRVTGVIRNKANFEVRNWVLGNIPNRKRMKAIQVATRLALEVGI TTIHSMEGGGLFSELDLQLLLEVKDENPLDIVLFNQTMDVDRVLSLGLDRIGGCIALD GSIGSRTAALIEPYADEPTTRARLYHSQKRINEFVTTAHKAGLQIAVHAIGSRAIDQI LEAYQVAQKEYPRDNPRHRVEHNELINQQQINKAKELGVTLSMQPAFEYYWGGSAGMY STRLGEKRAKRTNPFRDIIDANCLMIGGSDSDVTPMDPLLGIHGAVNHSNPTQQLTIK EALKLFTINPAKAAFEADIKGSIEVGKAANLTVLNRDILTVPSDEIKDIEVMKTIIKG RIHYARY" misc_feature complement(1922023..1923564) /locus_tag="Acear_1836" /note="Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]; Region: COG1574" /db_xref="CDD:31762" misc_feature complement(1922116..1923489) /locus_tag="Acear_1836" /note="YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling; Region: YtcJ_like; cd01300" /db_xref="CDD:30043" misc_feature complement(order(1922299..1922301,1922497..1922499, 1922593..1922595,1923352..1923354,1923358..1923360)) /locus_tag="Acear_1836" /note="active site" /db_xref="CDD:30043" gene complement(1923669..1925750) /locus_tag="Acear_1837" /db_xref="GeneID:9513894" CDS complement(1923669..1925750) /locus_tag="Acear_1837" /note="COGs: COG3829 transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR000014:IPR000700:IPR000644:IPR 013785:IPR013767:IPR003593:IPR009057; KEGG: drm:Dred_0399 PAS/PAC sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; hypothetical protein; AAA ATPase; SPTR: Q0AWW3 Sigma-L-dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: CBS domain; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box" /codon_start=1 /transl_table=11 /product="sigma54 specific transcriptional regulator" /protein_id="YP_003828406.1" /db_xref="GI:302392586" /db_xref="GeneID:9513894" /translation="MKVAEIMTKDPITLCKEDTIGKAAEIFHNERIDGAPVVDAENKL IGIFTKSHLMKAVKEGLENSIAVGKLMQTDVMKITEDRTLESAWKIKIGRLPVVDKDN GLVGILTRTDLVEAFYTQSQKVVGELTTILDSSHNGIIAIDVEGRIITFNSAAEEILG YKAEEVLGRQIADIIPNTGLINVLETGEEEFGEKINVGDVVALTNRSLIYKDGELRGS MAIFQDISELEKVSEELNTVKNLNKELDAIIESVSDGLYVTDGNADTIRINSAYEEIT GIKSEEVLGRNMEELVEEGIFSEAVTFQVLEKEESVSVMHDIKTGKQVLSTGNPVFNE EGEIVRVVTTARDVEELNHLKQELEKTKELSEKYYSELEKLRSQQLEFDEIVIKSGKM ERVFDLALQVGRVDSTVLITGESGVGKEIIARTIHKVSDRRDGSLIKVNCGAIPDNLL EAELFGYEEGAFTGAKSEGKMGMFELANDGTLFLDEIGELPLNLQVKLLRALQEKEIM RVGGTESIDINARIISATNQDLEQMTKEGKFREDLYYRLNVVPIYVPPLRERKEDITP LISHFLQEFNEKFEVNKTIASAAIEALENYDWMGNVRELENLIERLVVMTSEQMITLD CLPEHIKKKQQGNLDIEIFDIIPLKQGVSKVEEDLVKMALDKYGSTYKAAEVLGVSQP TVVRKKQKYGI" misc_feature complement(1925409..1925744) /locus_tag="Acear_1837" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature complement(1925403..1925726) /locus_tag="Acear_1837" /note="The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-...; Region: CBS_pair; cd02205" /db_xref="CDD:73081" misc_feature complement(<1925223..1925372) /locus_tag="Acear_1837" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature complement(1923672..1925363) /locus_tag="Acear_1837" /note="Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:33622" misc_feature complement(<1924866..1925021) /locus_tag="Acear_1837" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature complement(1924083..1924583) /locus_tag="Acear_1837" /note="The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes...; Region: AAA; cd00009" /db_xref="CDD:99707" misc_feature complement(1924491..1924514) /locus_tag="Acear_1837" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(1924170..1924172,1924296..1924298, 1924488..1924511)) /locus_tag="Acear_1837" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(1924293..1924310) /locus_tag="Acear_1837" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature complement(1924113..1924115) /locus_tag="Acear_1837" /note="arginine finger; other site" /db_xref="CDD:99707" gene complement(1925931..1927253) /locus_tag="Acear_1838" /db_xref="GeneID:9513895" CDS complement(1925931..1927253) /locus_tag="Acear_1838" /note="COGs: COG2031 Short chain fatty acids transporter; InterPro IPR006160; KEGG: nth:Nther_2249 short chain fatty acid transporter; PFAM: short chain fatty acid transporter; SPTR: B2A847 Short chain fatty acid transporter; PFAM: Short chain fatty acid transporter; TIGRFAM: conserved hypothetical integral membrane protein" /codon_start=1 /transl_table=11 /product="short chain fatty acid transporter" /protein_id="YP_003828407.1" /db_xref="GI:302392587" /db_xref="GeneID:9513895" /translation="MVKKLSKFFVSLIEEYLPDPFLFAIALTAVVYVLGIVIAGNGPM EMIGHWGDGLWNLLAFAMQMCLVLITGHALANTDLFSKILKKIASIPDSAGGAIALTT FISGLCCWINWGFGLVIGALLAKEMAKQVEGVDYRLLIASAYSGFVIWHAGLAGSVPL TVATEGHFMEHLMGVIPISSTIFSSYNLIISVVVLLTIPFLNRMMLPDKDERVIVDPE VLKEEDSAGNSEPELNTVADRLENNMLVSFVLGGMGAAYLLNYFVNNGFALNLNIVIF LFMTLGILLHKTPKNYLNAFETAVKGCSGIILQFPLYSGIMGMMVGSGLATIMSEFFV SIATQTTLPFFSFLSAGIVNFFVPSGGGQWAVQAPIMVPAAADLGVDISRISMAVAWG DAWTNMIQPFWALPALGIAGLGARDIMGYCIMVLMWSGVIVSLGLMFL" misc_feature complement(1925934..1927253) /locus_tag="Acear_1838" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" gene complement(1927279..1928457) /locus_tag="Acear_1839" /db_xref="GeneID:9513896" CDS complement(1927279..1928457) /locus_tag="Acear_1839" /EC_number="2.3.1.9" /note="COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: cbt:CLH_0482 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: B2UZJ2 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases" /codon_start=1 /transl_table=11 /product="acetyl-CoA acetyltransferase" /protein_id="YP_003828408.1" /db_xref="GI:302392588" /db_xref="GeneID:9513896" /translation="MEEIVIASAVRTAIGSFGGSLKKVSAIELGTTTIKAALERAELD AGEVDEVIMGNVLQAGSGQNPARQASVNAGLPVETPAMTINKVCGSGLKAVNLAAQAI KAGDGDVFVVGGMENMSQAPYVQNKARWGERMGHGKLVDTMIQDGLWCAFNDYHMGIT AENVAEQWDISREEQDEFAATSQQRAEAALEEGKFEDEIVPVEVPQRKGDPVVFDKDE YPRSGVTAEGLANLRPAFKKDGTVTAGNASGINDGAAALVVMTKSKAEELGVEPLATI KSYASAGVDPAIMGTGPIPSSKKALQEADLTVEDMDLVEANEAFASQSLAVVQDLGLD TEKVNVNGGAIALGHPIGASGARILITLLHEMKKQDSKYGLATLCIGGGQGAATVVER " misc_feature complement(1927282..1928457) /locus_tag="Acear_1839" /note="putative acyltransferase; Provisional; Region: PRK05790" /db_xref="CDD:180261" misc_feature complement(1927282..1928445) /locus_tag="Acear_1839" /note="Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and...; Region: thiolase; cd00751" /db_xref="CDD:29411" misc_feature complement(order(1927309..1927314,1927549..1927551, 1927609..1927611,1927615..1927617,1927621..1927623, 1928101..1928103,1928146..1928148,1928155..1928160, 1928179..1928181,1928203..1928214,1928245..1928247, 1928257..1928259,1928266..1928268,1928308..1928310, 1928389..1928391)) /locus_tag="Acear_1839" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29411" misc_feature complement(order(1927321..1927323,1927411..1927413, 1928194..1928196)) /locus_tag="Acear_1839" /note="active site" /db_xref="CDD:29411" gene complement(1928480..1929139) /locus_tag="Acear_1840" /db_xref="GeneID:9513897" CDS complement(1928480..1929139) /locus_tag="Acear_1840" /EC_number="2.8.3.9" /note="COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR012791:IPR004165:IPR004164; KEGG: amt:Amet_4246 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; PRIAM: Butyrate--acetoacetate CoA-transferase; SPTR: A6TVV6 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit" /codon_start=1 /transl_table=11 /product="butyryl-CoA:acetoacetate CoA-transferase beta subunit" /protein_id="YP_003828409.1" /db_xref="GI:302392589" /db_xref="GeneID:9513897" /translation="MDKQTKREIIANRIAAELNDGDIVNLGIGLPTMVGDYVSDDIDI TLQSENGFLGLGPAPEEGDEDKDLVNAGAQPVTIKEGGAFFDSADSFAIIRGGHVDIT VLGALQADEQGNLANWMIPGKLVPGMGGAMDLVVGAQQVIIGTAHTIKGNPKILKECD LPLTAKKQVDLIVTEMGVMKVTEDGLVLREINPEFTVDEVQEATEAELIIPDDLEEME V" misc_feature complement(1928510..1929121) /locus_tag="Acear_1840" /note="Coenzyme A transferase; Region: CoA_trans; cl00773" /db_xref="CDD:189128" gene complement(1929142..1929795) /locus_tag="Acear_1841" /db_xref="GeneID:9513898" CDS complement(1929142..1929795) /locus_tag="Acear_1841" /EC_number="2.8.3.9" /EC_number="2.8.3.8" /note="COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR012792:IPR004165:IPR004163; KEGG: amt:Amet_4247 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; PRIAM: Acetate CoA-transferase; SPTR: A6TVV7 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit" /codon_start=1 /transl_table=11 /product="butyryl-CoA:acetoacetate CoA-transferase alpha subunit" /protein_id="YP_003828410.1" /db_xref="GI:302392590" /db_xref="GeneID:9513898" /translation="MAEVTSLDEALDQVKDGMEVMIGGFMSCGTPRKIVKGMVEREVK DLTIIANDTGKTNDGIGRLIRNKQAEKVIASHIGLNPETGDQMNDGELEVDLVPQGTL VEQIRAAGAGLGGFLTPTGVGTVVEEGKDKIEIDGQEYLLELPITADVALVKAWKADK KGNLVYRKSARNFNPLIAMAADLVIVEAEEIVETGEIDPNEVMTPAAFVDIIVGGEE" misc_feature complement(1929145..1929780) /locus_tag="Acear_1841" /note="Coenzyme A transferase; Region: CoA_trans; cl00773" /db_xref="CDD:189128" gene complement(1930584..1931231) /locus_tag="Acear_1842" /db_xref="GeneID:9513899" CDS complement(1930584..1931231) /locus_tag="Acear_1842" /note="COGs: COG0020 undecaprenyl pyrophosphate synthase; InterPro IPR001441; KEGG: hor:Hore_14480 di-trans-poly-cis-decaprenylcistransferase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; SPTR: B8CY28 Di-trans-poly-cis-decaprenylcistransferase; PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase" /codon_start=1 /transl_table=11 /product="Di-trans-poly-cis-decaprenylcistransferase" /protein_id="YP_003828411.1" /db_xref="GI:302392591" /db_xref="GeneID:9513899" /translation="MRVPDHIGIIPDGNRRWAESKGLSKEQGYTHGLSPGVKLLRLCK EVGVNEVTYYGFTTDNTERPPKQITAFRQACVDAVEMLANEDASLLVIGDRQADEFPD ELESYTEERQPFGNNEIKVNFLVNYGWKWDLNSLSQADEVSRRKLKNQLNSNQVSQVD LVIRWGNRRRLSGFLPVQSVYADFYVVDEYWPDFEPEQFYEALEWYDKQDITYGG" misc_feature complement(1930614..1931222) /locus_tag="Acear_1842" /note="Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS); homodimers which catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl...; Region: CIS_IPPS; cl00230" /db_xref="CDD:193723" misc_feature complement(1931196..1931198) /locus_tag="Acear_1842" /note="catalytic residue [active]" /db_xref="CDD:29593" misc_feature complement(1931184..1931195) /locus_tag="Acear_1842" /note="putative FPP diphosphate binding site; other site" /db_xref="CDD:29593" misc_feature complement(order(1930863..1930865,1930869..1930871, 1930929..1930931,1931016..1931021,1931061..1931075)) /locus_tag="Acear_1842" /note="putative FPP binding hydrophobic cleft; other site" /db_xref="CDD:29593" misc_feature complement(order(1930680..1930682,1930692..1930694, 1930701..1930703,1930713..1930715,1930722..1930727, 1930806..1930808,1930842..1930844)) /locus_tag="Acear_1842" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29593" misc_feature complement(order(1930722..1930724,1930740..1930742)) /locus_tag="Acear_1842" /note="putative IPP diphosphate binding site; other site" /db_xref="CDD:29593" gene complement(1931864..1933261) /locus_tag="Acear_1843" /db_xref="GeneID:9513900" CDS complement(1931864..1933261) /locus_tag="Acear_1843" /note="COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: nth:Nther_2612 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: B2A1X1 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: efflux protein, MATE family" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /protein_id="YP_003828412.1" /db_xref="GI:302392592" /db_xref="GeneID:9513900" /translation="MLGVKLTKDSDRLGTEEILPLLIKLSVPGIIGMSTQSLYNVIDS IYIGRLSKEALSAVSLAFPVQMILIAIGAGTGVGISSLISRLLGQGREDRASNAAGHV MLITLVYGLVFCLLGILWSDELINIFTDNSTLIAMAVEYIRVIMMGSLAIFFPMIANN ILRGAGNTFAPMVMLVIGAVLNIILDPFLIFGIGIFPKLGIQGAAVATILSRLIGGIF IAYILFLQQNQIEFSVKKFEFDFQLIKEIYRVGLPAMAMPLSASVMIAGVNKIIAGYS TLAIAVFGIYFRLQSFVFLPIVGLNQGYMPIVGYNYGHKNPERMKKTIKLGLAVSSVF TTIGFITFQLFPQELIQLFNRSPELLEMGVTALKKLTLAFPIMGPALVASATFQAVGK GVPSLIHSVTRQVFFLFPIMYVLGEIYGLDTLWYALPIAEFIAAVGIIIWMVITFRTL FTELQSTSVATENSQ" misc_feature complement(1931918..1933210) /locus_tag="Acear_1843" /note="Na+-driven multidrug efflux pump [Defense mechanisms]; Region: NorM; COG0534" /db_xref="CDD:30880" misc_feature complement(1932701..1933180) /locus_tag="Acear_1843" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" misc_feature complement(1932044..1932505) /locus_tag="Acear_1843" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" gene complement(1933295..1933804) /locus_tag="Acear_1844" /db_xref="GeneID:9513901" CDS complement(1933295..1933804) /locus_tag="Acear_1844" /note="KEGG: drt:Dret_0274 hypothetical protein; SPTR: Q3Z8U7 Membrane protein, PFAM: Predicted permease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828413.1" /db_xref="GI:302392593" /db_xref="GeneID:9513901" /translation="MNWLAIIFGKGWPQRIIILGAVILYIYLGFTKPEVAKEGINGAG KTFLNLFTLIFAALLISRAIGLLLPEETIYQWFGEETGVLGIIRGGLLGGVLQGGPYA VYPIIKSIYDKGAHISVVIAMLLGYGAIGLARIPYGFFFFEPKIIGLRVLLALPVPII GGLLVYLFF" gene complement(1933930..1934460) /locus_tag="Acear_1845" /db_xref="GeneID:9513902" CDS complement(1933930..1934460) /locus_tag="Acear_1845" /note="InterPro IPR018392:IPR002482; KEGG: hor:Hore_13890 peptidoglycan-binding LysM; PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM; SPTR: B8CXX0 peptidoglycan-binding LysM; PFAM: LysM domain" /codon_start=1 /transl_table=11 /product="peptidoglycan-binding lysin domain protein" /protein_id="YP_003828414.1" /db_xref="GI:302392594" /db_xref="GeneID:9513902" /translation="MDGLSVARNILVQERVLCFLYRRLDQQVTDEELDEIVNRLRRLQ RQQLQLLNELIEKLEIPMPPSGVRYAEYIVQRGDTLFLIAQRYNTTIANLLRVNPGIE DPDDIQVGMRIKLPIILPQPPEDYFEYTVRMGDTLFELARRFNTTVNELVFFNSISNP ELIYPGRILIIPSDEE" misc_feature complement(1934113..1934247) /locus_tag="Acear_1845" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1934203..1934205,1934212..1934214, 1934227..1934229,1934236..1934238,1934245..1934247)) /locus_tag="Acear_1845" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" misc_feature complement(1933939..1934214) /locus_tag="Acear_1845" /note="FOG: LysM repeat [Cell envelope biogenesis, outer membrane]; Region: LytE; COG1388" /db_xref="CDD:31578" misc_feature complement(1933945..1934076) /locus_tag="Acear_1845" /note="Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function; Region: LysM; cd00118" /db_xref="CDD:29017" misc_feature complement(order(1934032..1934034,1934041..1934043, 1934056..1934058,1934065..1934067,1934074..1934076)) /locus_tag="Acear_1845" /note="putative peptidoglycan binding site; other site" /db_xref="CDD:29017" gene complement(1935102..1936988) /locus_tag="Acear_1846" /db_xref="GeneID:9513903" CDS complement(1935102..1936988) /locus_tag="Acear_1846" /note="COGs: COG0840 methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR004010; KEGG: hor:Hore_22560 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: B8D0R5 methyl-accepting chemotaxis sensory transducer; PFAM: Cache domain; HAMP domain; methyl-accepting chemotaxis protein (MCP) signaling domain" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer with Cache sensor" /protein_id="YP_003828415.1" /db_xref="GI:302392595" /db_xref="GeneID:9513903" /translation="MLESIKERITVRNKLLLFILIPLFIISVILLYRNYTAVTTSITE TVEETSLQQTEGYTQVIDNWLEAKKNETRILAKTLELEEGWSENRDVWALVDKLDREA LEDTFESLMLIDRTGRAWTTQDRSIHDVSNRDYFLEAKRKNELIVSEAMRSKMTGEHI FTISLPVKNETGKTVAVLSGTTLLKPLQQIVNNMGLGETGYAYLVEGDGQVIAHPTQA LELNILDSSQEAITKNLANIGKKMVAEKKGTDRYTYQGQEQYVYYHPVEGTDWSLALI VPVEELTAAGKKIVTQSTIGYIALFLIIAAVVFFISNSIGKTINEILDVLDKAADGDL TERAESKTNDELGRMADAINRTFDSFAETINKLINMADEVASAGQELSASAEEADATI ETTSDQVDQMAGGIQQVAASSQEVNAFSEEATATAHEGNENIETAVEQMKEIDQKVND VETVVKDLSETSEEIEKIIQLITDIADQTNLLALNAAIEAARAGEHGHGFAVVADEIR ELAEQTGEATEEIAGLITETQEGSKEATEAINAGVAAVDKGERIITEAGNAFEEITQA IEETSTQVQETSSATQQLASNSDEVARATDQIEAISDEITDASVELAHLAEDLESMVK QFEV" misc_feature complement(1936344..1936550) /locus_tag="Acear_1846" /note="Cache domain; Region: Cache_1; pfam02743" /db_xref="CDD:145738" misc_feature complement(<1935822..>1936211) /locus_tag="Acear_1846" /note="two component system sensor kinase SsrA; Provisional; Region: PRK15347" /db_xref="CDD:185245" misc_feature complement(1935912..1936106) /locus_tag="Acear_1846" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(1935111..1935872) /locus_tag="Acear_1846" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(1935105..1935716) /locus_tag="Acear_1846" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(1937007..1938875) /locus_tag="Acear_1847" /db_xref="GeneID:9513904" CDS complement(1937007..1938875) /locus_tag="Acear_1847" /note="COGs: COG2206 HD-GYP domain; InterProIPR000014:IPR000700:IPR013767:IPR013655:IPR 006674:IPR001610:IPR003607; KEGG: sat:SYN_01234 response regulator receiver domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold-3 domain protein; PAS fold domain protein; SMART: metal-dependent phosphohydrolase HD region; PAS domain containing protein; PAC repeat-containing protein; SPTR: Q2LW86 Response regulator receiver domain with sensory domain; TIGRFAM: PAS sensor protein; PFAM: HD domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box; uncharacterized domain HDIG" /codon_start=1 /transl_table=11 /product="PAS/PAC sensor protein" /protein_id="YP_003828416.1" /db_xref="GI:302392596" /db_xref="GeneID:9513904" /translation="MKAEDNQQNLILDDAVMEIANQLRLTKEADFEPILEIIGDEVEV DSIFIFNFMVKYKQIDEWTAMDYQPLFKDLSQAKIEELGWKFRKLVQDEEYIINNSSQ LSKELIEEQVIIQSLDVSALVLVPIFDAEERLVGIIGAAKRQTPKFWSESELKLFNIT AEMLGNHYELYKTEVEKRKLFNTIETAAVVLDSSWQIIAANDEFKKLSGYTEELPEDV EMMDFIHQDDVDKVRGYLQQKMNSSNLLLSEEEVRFITKDQRTKHVSISAGLIPETTE IIVSLLDITEKKEIKDEFRKNAELLYSSFEKANIGMTIINLDKEFIKANDAFCNMLGY SKEQMLQKTFIDITHPNDRERSINLWNQLIDGGERTVEFEKRYLHQDGYIVWADINLT LVRDENDDPLYFISQIENITEEKKTKQKLEYSHKQLEKTFNSMVDTLGSVISLRDPYT AGHQQRVAELAVEIGREMNLHSDMIEGIKVAGILHDIGKIKVPAEILSRPGEITDEEF QLIQQHCRHGYDILQEVEFDWPIAEVALQHHERIDGSGYPQGLSGEDILLEAKILAVA DVVEAMSSHRPYRPSLGIDAAINEIKKNKGLKYNSRVVDACLNVLENNRQILEKAN" misc_feature complement(1938339..1938803) /locus_tag="Acear_1847" /note="FOG: GAF domain [Signal transduction mechanisms]; Region: FhlA; COG2203" /db_xref="CDD:32385" misc_feature complement(1938006..1938344) /locus_tag="Acear_1847" /note="PAS domain S-box; Region: sensory_box; TIGR00229" /db_xref="CDD:161776" misc_feature complement(1938024..1938311) /locus_tag="Acear_1847" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(order(1938099..1938101,1938114..1938116, 1938198..1938209,1938246..1938248,1938264..1938266, 1938276..1938278)) /locus_tag="Acear_1847" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(1938072..1938074,1938078..1938080, 1938168..1938173,1938180..1938182,1938204..1938206, 1938216..1938218)) /locus_tag="Acear_1847" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(1937613..1937981) /locus_tag="Acear_1847" /note="PAS domain S-box; Region: sensory_box; TIGR00229" /db_xref="CDD:161776" misc_feature complement(1937643..1937954) /locus_tag="Acear_1847" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(order(1937730..1937732,1937745..1937747, 1937826..1937837,1937874..1937876,1937892..1937894, 1937904..1937906)) /locus_tag="Acear_1847" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(1937703..1937705,1937709..1937711, 1937796..1937801,1937808..1937810,1937832..1937834, 1937844..1937846)) /locus_tag="Acear_1847" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(1937160..1937534) /locus_tag="Acear_1847" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature complement(order(1937175..1937177,1937418..1937423, 1937517..1937519)) /locus_tag="Acear_1847" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature complement(1937418..1937420) /locus_tag="Acear_1847" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene complement(1939023..1942220) /locus_tag="Acear_1848" /db_xref="GeneID:9513905" CDS complement(1939023..1942220) /locus_tag="Acear_1848" /note="COGs: COG2909 ATP-dependent transcriptional regulator protein; InterProIPR013026:IPR011990:IPR001440:IPR005158:IPR 019734; KEGG: sth:STH810 transcriptional regulator; PFAM: transcriptional activator domain; TPR repeat-containing protein; SPTR: A6CQL5 transcriptional regulator; PFAM: Bacterial transcriptional activator domain" /codon_start=1 /transl_table=11 /product="transcriptional activator domain protein" /protein_id="YP_003828417.1" /db_xref="GI:302392597" /db_xref="GeneID:9513905" /translation="MKEGMEDRVEIQSKFIPSNYNIASWKNKKVWNKYKNISTYPLTI IEAKAGYGKTTSLVGFIHQEYSADFYWYSIEKAEVNIISFWSNICRAIGFREEEITDL LDELIIELNQGGIGVEEVVVHLINLLINKLNGNKYLIIDNFYVACEDKDIIDSLNYFI KFLPSSVHLILLTRLEVNFPSLYSWQIERRVLKIEEENFILNRQQIEEFALLQYDLQL TSERIEEILKESEGWILAVDLMLREMDKGNNPEEVMAEDSKSFSLLVEYFNCEVLDYL SDKDPYLINFLLQTSILKKLEVDICNQLLDINISQQILEQLLSSQAFLYQIDDDDGYC YHNLFKEFLEYTAKQKYDYNLLHNKAKEIYYNEGRDDGVVYHILQVGDEEEIVKLVIE NISDWKEREKFNLLEKCLDFLSQDTYLSHPYLHIYQGDIYYQEEEYDLAAKEYQTARE YFQDQQNKKGLISALFKLSRLYFFLHSIKGVEYFNELINYKHLFSDKQQKEFLYLKAK ACFYQGEIGQTKEMILKLKSHDIECNTLKAELAFLSGDLLQAQKLIKEIMINQERYSY FLDYIRIVINLFRGNIHQAQELVWRKIVAAKGIEKTFFEYIGATVDRMAGRRKEEISK RKYFETLKNNLDSSCWYLSMLMVDLIFWEAYYGNPELGIESGKECLTKFAKTEYGVAI TYYGIGLNYHSSQNSEDSLKYFEEAKNCFEKLDNKLYLCTVLMLISAVTYELGCETKF EPTIEQTLKLARENSYDYLFLKETFIGVKSLNDFIPVLIEARDRGIEADYVNELLSEF NLSNLDRHPGYCLKIKAFGEFRLWRRCGKEEVVEEEWTRKKSKELFKLFLVNYDELIP RERICSLLWPDKEIDKAKRSFNVALNNLNQILEPNRESGAEPYFIVRHNLSYGLNRRI SYSYDVADFEEAIKRGDRTKDGVVKMNYYQQAVELYQDDFLVHDLYKSWINIERERLI RLFLDTANNLIEYYFKQGEYEESIQLADRILAIDKYFEQAYLYKMKSYEQLGQRSFAV KTYQKCKGILNKELNINPISEIEDYYQKLTLENST" misc_feature complement(<1940439..1942103) /locus_tag="Acear_1848" /note="ATP-dependent transcriptional regulator [Transcription]; Region: MalT; COG2909" /db_xref="CDD:32733" misc_feature complement(1939047..1939790) /locus_tag="Acear_1848" /note="DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms]; Region: DnrI; COG3629" /db_xref="CDD:33428" gene complement(1942235..1942402) /locus_tag="Acear_1849" /pseudo /db_xref="GeneID:9513906" gene 1942580..1943971 /locus_tag="Acear_1850" /db_xref="GeneID:9513907" CDS 1942580..1943971 /locus_tag="Acear_1850" /note="COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: hor:Hore_05190 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: B8D250 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: efflux protein, MATE family" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /protein_id="YP_003828418.1" /db_xref="GI:302392598" /db_xref="GeneID:9513907" /translation="MAKKFKKQLGKQVDSTKGSIIKSLFHLSWPIILSNLMHMTYNLV DTIWVGKVGAKAVAAISLSFPIVFVLLSLGIGFTIAGTTLVAQYTGAEEGEKVNHVVG QIFSFVLSIALFCSVIGIIFTPDFLKWMGASKEVLPLAVSYMRVLFGGMTFMFIFFIF SALLRGSGNSITPMKLMFVSTLINIILDPFLIFGVSFFPELGVTGAAVATIFSRAVVA VISIYFLWTGKYGLHLKWHHLKFDFKLIKEIVVLGAPAAIEQSTRGLGMTVMMSIVAH FGTMAVAAFGICTRILSLVIMPSRGFSTATTTMVGQNLGANKVSRAEKSAYISTGLNF ILLSILGAIFFTVPQLVIKVFNDNPEVIRIGSSFIQINGLFFGFMGGLIVINGGFRGA GNTLSAMFFSIFSLWIIRIPLANIWSKVFEWGTNGIWWAFVISNVLGSLTAILWFKRG HWKKSIINKDKKA" misc_feature 1942610..1943965 /locus_tag="Acear_1850" /note="Na+-driven multidrug efflux pump [Defense mechanisms]; Region: NorM; COG0534" /db_xref="CDD:30880" misc_feature 1942667..1943146 /locus_tag="Acear_1850" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" misc_feature 1943342..1943821 /locus_tag="Acear_1850" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" gene complement(1944010..1947123) /locus_tag="Acear_1851" /db_xref="GeneID:9513908" CDS complement(1944010..1947123) /locus_tag="Acear_1851" /note="COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: hor:Hore_05050 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: B8D236 Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family" /codon_start=1 /transl_table=11 /product="acriflavin resistance protein" /protein_id="YP_003828419.1" /db_xref="GI:302392599" /db_xref="GeneID:9513908" /translation="MKLSDFSVDRPVTTVMVILIIIVLGGIAFTRLSVDLYPDMTIPV VSVSTRYSGAAPEEIEESVTRPLEEGLATVDDIDSVSSTSRENLSQVTLEFDWGTDMD MAAVDVREQVSQIKEHLPDEADDPIVRKIDLDQIPIMIFGISSDHRSGLELKEFAEDN IKDELEKIPGLASASIVSGENRQININVDRKKLEGYNLSINQVTAALHQENVNLPGGE ITERPTEYLLRTEGQFESIEDIENVIITMRQQKPITIKNVAEIEDGYKDRSVYVRVNE RKTVGAMVTKQSGANTVEVIDRAKEKLDKIREDLPSDIYIDISRDQSKFIKKSIATVQ QNVLVGGLFAVIILFLFLRSFRSTFIIGAAIPITVVAAFGLLYYSGYTLNLMTLGGLA LGVGMLVDNSVVVLENIFRHLRHEGADPIRAAKQGSDEVGTAVFASTMTTLAVFIPIS FVEGIARELFGPFSMTIAFALLASFIIAVTFVPMSSARLLSFSNVKEDDAQEEKITVR AANKVLNIYRQILDWCLDHRKTVLAIAVILFAASLALFPFIGKEFMPDSERDSFRIMI ELPVGTGLETTNQEAKKIEKIVTQIPEVQVAFNLVGDTGGKGSTSGSNEAMFMVRLVD EENRERSTSEIQESIRSKLPSIPGAEIRFAEASMIGGGGGDDSPLSIKIFGGDLDRLE SIADQVKKEVEKVKGTRDVHSSVDEGKPEIRVDVDRKRAADLGLGVNKIGKTVETYVN GRTATQYHGTEDGDTVDIKVRLAKADRTKIQQLNSMKIMTSKGRFIPLNSVAKIVQTE GPTKVTREDQQRHVSIYSNLGDRDLGSVVADISDRVESNIELPPNYSIEYSGENEDMQ ETFKNLSMALAVAIVLVYMVLASQFESLLHPFTVMLTLPLTLIGVLAALFLTGETISA TSMIGVIMLAGIVVNNAIVLVDYINLLRDRGLRRREAILKAGPVRLRPVLMTALTTIL GLIPVAAGWGSGSEGMAPMGIAVIGGLTTATFLTLLVIPTLYLSLEKIKDFLITVPGK LKDKIAG" misc_feature complement(1944064..1947120) /locus_tag="Acear_1851" /note="Cation/multidrug efflux pump [Defense mechanisms]; Region: AcrB; COG0841" /db_xref="CDD:31183" misc_feature complement(1944130..>1944540) /locus_tag="Acear_1851" /note="Protein export membrane protein; Region: SecD_SecF; cl14618" /db_xref="CDD:176628" gene complement(1947120..1948262) /locus_tag="Acear_1852" /db_xref="GeneID:9513909" CDS complement(1947120..1948262) /locus_tag="Acear_1852" /note="COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: swo:Swol_0175 hypothetical protein; PFAM: secretion protein HlyD family protein; SPTR: Q0B0H7 Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit" /codon_start=1 /transl_table=11 /product="efflux transporter, RND family, MFP subunit" /protein_id="YP_003828420.1" /db_xref="GI:302392600" /db_xref="GeneID:9513909" /translation="MKNGKLVILLASLLIFSLVISGCSSQSEQAVADSEPKKQESVQQ EDSKDSKLVVQVAEATRDDLKVELDFTGELAAYREVNLVPEISGVVREIKFEENDQVN KGQLLLKLDQAMEQAEVEKVEGNLEVAKSRLDNARKKFKRIKSLYEKNVISKSEYDST KSKYEVARAQLKQAKASLNSAETQLNKTTIESPIKGVIAQKRVELGEMATTGNPVAKI VQLRPLEFEGSISTTDLTKVEVGQSVTVEVDSYPERTFTGEVNKVAPTVNPSNRGLKV TVQLANEELLLKPGMFAAGRILVDELENVLVVPKAAVKEQNSSQQILVVKNGTVENRD VETGPANNNRIVVTEGLKPGEKAVVRGPANLQSGTEVEVTEWGETE" misc_feature complement(1947165..1948103) /locus_tag="Acear_1852" /note="RND family efflux transporter, MFP subunit; Region: RND_mfp; TIGR01730" /db_xref="CDD:162505" misc_feature complement(1947696..>1947950) /locus_tag="Acear_1852" /note="Outer membrane efflux protein; Region: OEP; pfam02321" /db_xref="CDD:190278" gene complement(1948309..1949655) /locus_tag="Acear_1853" /db_xref="GeneID:9513910" CDS complement(1948309..1949655) /locus_tag="Acear_1853" /note="COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: gme:Gmet_3465 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: A1HRF7 Outer membrane efflux protein; PFAM: Outer membrane efflux protein" /codon_start=1 /transl_table=11 /product="outer membrane efflux protein" /protein_id="YP_003828421.1" /db_xref="GI:302392601" /db_xref="GeneID:9513910" /translation="MFQKDRLTGLVLLLVLGLLLNCTVSIQAEEKEVIELDLKEGIKL GLERNSSLQQLKSRMEAARAAVEQVEAQLKPRVSINSRYTRFDEEQRINRNSINASKD LYSHQLNLNYLLYQTPAKLKVKQKEYQWQNIKEEYQHQKKQLAYRITQNYYEILKAQE LVRVNQESLKQVKEHLKQTRAHLKAGNAVKTDLLQTKVRKSEVQQQFLQAKNNLQLAR ERFKNQLEIKGSKQIELTEDIGFPEVDLSMPKALDSAFDKRSDLNSLQAELKSLRQGL KWAQKSDNPNLALSGKVSKEGSEFNPESDEFWSVTVNLEWDLYDGGENEALVEQSKSN LEAQESALDKKKQSIDLEVREGFLNLDLSRKQKATAKQRVESAQENLRLAKLRYKEGV AINTEVIDAQVELSKAKTDHQQSVYDYYINQAALLKSMGMSYLSVHNSETDLSRSN" misc_feature complement(1948363..1949550) /locus_tag="Acear_1853" /note="type I secretion outer membrane protein, TolC family; Region: type_I_sec_TolC; TIGR01844" /db_xref="CDD:162556" misc_feature complement(1948990..1949544) /locus_tag="Acear_1853" /note="Outer membrane efflux protein; Region: OEP; pfam02321" /db_xref="CDD:190278" misc_feature complement(1948363..1948905) /locus_tag="Acear_1853" /note="Outer membrane efflux protein; Region: OEP; pfam02321" /db_xref="CDD:190278" gene complement(1949668..1950255) /locus_tag="Acear_1854" /db_xref="GeneID:9513911" CDS complement(1949668..1950255) /locus_tag="Acear_1854" /note="COGs: COG1309 transcriptional regulator; InterPro IPR001647:IPR009057:IPR011075:IPR012287; KEGG: tte:TTE0070 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Q8RDG2 transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_003828422.1" /db_xref="GI:302392602" /db_xref="GeneID:9513911" /translation="MELDNKEERILEAAAEVFADQGFFKATVIEIAEQADIAKGTIYL YFDSKQDLFKSLIVSRVNRLYQGALKDKENKSSFEAKIKSIITRELNYFAEEADLSKS IISGFSGMDEEFKKAFCKIRKKYRGVIKEIIQSEIEFEAVEDVASDDAVRALQGIIHS FGFDYYLTSTDEDSKVEELTDIIYNLFINGISEKN" misc_feature complement(1949683..1950246) /locus_tag="Acear_1854" /note="Transcriptional regulator [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:31500" misc_feature complement(1950088..1950228) /locus_tag="Acear_1854" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:144144" gene complement(1950404..1951819) /locus_tag="Acear_1855" /db_xref="GeneID:9513912" CDS complement(1950404..1951819) /locus_tag="Acear_1855" /note="COGs: COG5598 Trimethylamine:corrinoid methyltransferase; InterPro IPR010426; KEGG: dhd:Dhaf_4326 trimethylamine methyltransferase; PFAM: trimethylamine methyltransferase; SPTR: Q24SP7 Putative uncharacterized protein; PFAM: Trimethylamine methyltransferase (MTTB)" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase" /protein_id="YP_003828423.1" /db_xref="GI:302392603" /db_xref="GeneID:9513912" /translation="MLERRFEPQDVLSEEEVEQIHEASMNLLENTGMEVLHEEAREIF AENGAKVEGKKVYLPRKIVEDYVEKAPETFTLHARNPENTVEVGGQNSVFAPGFGSPY VTDIENGRRESTYEDYVNFTKLSAASGHLDTLGGVLVEMNDIPEEERHVKMIHAGAKY SDKSLMSSALGEKKARDCFKMTSLLFGEDEIIDDRTINISIVSTTTPLKYDTKMVGAI LEHARYNQASIIASLVMGGSTGPITIAGGLVLQNVEVLAGVVLAQMVNPGAPVVYGSA STITDMKTAALTVGSSEYTKYTGATAQLARYYGMPSRNGGVLTDSLVTDVQAGYESMM NFMTSMNYGINFQIHCAGLLENYMTMSYEKFVVDEEILGMVKNCHRKIEVNEDTLAED LIDEVGHGGHYLSESHTLNHMKDHREPIINNRSGYSAVDEKTTAAERANEKWKQMLED YEEPYLDPVIEKKLTDFMENL" misc_feature complement(1950419..1951816) /locus_tag="Acear_1855" /note="Trimethylamine methyltransferase (MTTB); Region: MTTB; cl02383" /db_xref="CDD:174723" gene complement(1951883..1952254) /locus_tag="Acear_1856" /db_xref="GeneID:9513913" CDS complement(1951883..1952254) /locus_tag="Acear_1856" /note="KEGG: cby:CLM_2227 sigma-54 dependent transcriptional regulator; SPTR: B0A7A3 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828424.1" /db_xref="GI:302392604" /db_xref="GeneID:9513913" /translation="MSKLKEIEDFIQQVADAFAAVLDYEICIVDDDLEVLVGTGKYQE EINDRGGPGCITHQLMLNPQQTDLFVRDTSESALCNQCSKRQGCPVQATIVCSIVFSN ITFGTFCLMAMNERQSQNFIT" gene complement(1952365..1954338) /locus_tag="Acear_1857" /db_xref="GeneID:9513914" CDS complement(1952365..1954338) /locus_tag="Acear_1857" /note="COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit; InterPro IPR008040:IPR002821; KEGG: dhd:Dhaf_1734 hydantoinase/oxoprolinase; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; SPTR: B8FPW6 Hydantoinase/oxoprolinase; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region" /codon_start=1 /transl_table=11 /product="Hydantoinase/oxoprolinase" /protein_id="YP_003828425.1" /db_xref="GI:302392605" /db_xref="GeneID:9513914" /translation="MGFVLGIDTGGTYTDGVVMDVEEGLIYDTAKSLTTRRDLAVGIN KCMNNLDEVDFDNIKMVSLSTTLATNATVEEQGCEVGLILVGFEIENELPTEHIVQVS GGHTIKGEERENLDSKEVKEAVQSMKDQVDAFAVSSYFSIRNPEHEEKVKSIIQEITD YSIVCGHELTSSLGMHERTTTAVLNARLLPIIAELIEAVKESMDNKGIDAPLMIVKCD GSLVSEEVAQEKPIETILSGPASSLIGATYLTDVEDGIVVDMGGTTTDVALLENGNPS LNEEGAMVGGWLTRVQAVDIVTIGVGGDSYVQISKDGILQIGPQRVYPLAWAIEEEEY LIDQLKEIKEGECFPINSQPTDILFFIKEPINVDLSRTETKILKIIKEEGPQTLYHLG QKLNKSTNLLFWQRLVNIGSVYRASLTPTDILHAEGELDRWNKQAAELGVEIMTSRYG TTQGEFITDVREEIYYKVALVISEMLLKDKGINFEWEQDSLAEFLLQEMFGSNQELEE LIDFSAVMKLPIVAIGAPVEAYFPQIADKLNASLKIPDYSEVANAVGTVTGKVIERVE IEIKPDTGSGYIAYAPLERREFSDLTSAVEFAKEAGKEYARSQVEKSGAVDIEVMVDH DDVYISFSQSGESDDLYITSVIEVIAMGRPKLK" misc_feature complement(1952458..1954338) /locus_tag="Acear_1857" /note="N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]; Region: HyuA; COG0145" /db_xref="CDD:30494" misc_feature complement(1953862..1954326) /locus_tag="Acear_1857" /note="Hydantoinase/oxoprolinase N-terminal region; Region: Hydant_A_N; pfam05378" /db_xref="CDD:147519" misc_feature complement(<1953364..1953807) /locus_tag="Acear_1857" /note="Hydantoinase/oxoprolinase; Region: Hydantoinase_A; cl00668" /db_xref="CDD:163895" misc_feature complement(1952644..>1952787) /locus_tag="Acear_1857" /note="Hydantoinase/oxoprolinase; Region: Hydantoinase_A; cl00668" /db_xref="CDD:163895" gene complement(1954414..1955655) /locus_tag="Acear_1858" /db_xref="GeneID:9513915" CDS complement(1954414..1955655) /locus_tag="Acear_1858" /EC_number="2.6.1.83" /note="COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004838:IPR004839:IPR015424:IPR015421; KEGG: ate:Athe_0546 aminotransferase class I and II; PFAM: aminotransferase class I and II; SPTR: C6J3D0 Aminotransferase class I and II; PFAM: Aminotransferase class I and II" /codon_start=1 /transl_table=11 /product="LL-diaminopimelate aminotransferase apoenzyme" /protein_id="YP_003828426.1" /db_xref="GI:302392606" /db_xref="GeneID:9513915" /translation="MTEESYIQQQFAERIGGEQFGKGDVLYKFEKIKRAKEAAKEENP EVELIDLGVGEPDWMADDGVIERLYEEAQKWENRGYADNGIFAFKEAAAEYMAEVFDV EGLDPETEINHSIGSKPALAMLPSAFINPGDITIMTTPGYPVMGTNTEGLDGEVVSLP LLKENDFLPDLNSLNEEEKERAKLLYINYPNNPTGAVANKEFFAEVVEFAKENDIIVI HDAAYAGLTFDGYEPLSFLSVPGAKEVGIEIQSLSKAFNMTGWRMAFVAGNPLVVNAF ATVKDNNDSGQFKAIQQACVYALNHPEITEKTSKKYSRRHNMLVDALQDLGFEAEKPK GSFYLYVPIPKGTEDGIEFENAEEFCQYLIKEHLISAVPWDDAGSFVRFSVTFVAEGE EEEQQVIDEIKDRLSRAKFVF" misc_feature complement(1954429..1955514) /locus_tag="Acear_1858" /note="aspartate aminotransferase; Provisional; Region: PRK08361" /db_xref="CDD:169403" misc_feature complement(1954498..1955511) /locus_tag="Acear_1858" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature complement(order(1954870..1954872,1954894..1954899, 1954903..1954905,1954987..1954989,1955080..1955082, 1955230..1955232,1955302..1955310)) /locus_tag="Acear_1858" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(1954774..1954776,1954783..1954785, 1954870..1954878,1955008..1955010,1955200..1955202, 1955299..1955301)) /locus_tag="Acear_1858" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(1954894..1954896) /locus_tag="Acear_1858" /note="catalytic residue [active]" /db_xref="CDD:99734" gene complement(1955695..1956534) /locus_tag="Acear_1859" /db_xref="GeneID:9513916" CDS complement(1955695..1956534) /locus_tag="Acear_1859" /EC_number="5.1.1.7" /note="COGs: COG0253 Diaminopimelate epimerase; InterPro IPR001653:IPR018510; KEGG: dae:Dtox_2322 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; PRIAM: Diaminopimelate epimerase; SPTR: A5D193 Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase" /codon_start=1 /transl_table=11 /product="diaminopimelate epimerase" /protein_id="YP_003828427.1" /db_xref="GI:302392607" /db_xref="GeneID:9513916" /translation="MEFTKMHGLGNDFVMVNGFNEDIADPNQLAEAICDRHFGVGADG LVLILPSKQEEADFRMRIFNPDGSEPEMCGNAIRCFGKYLYDRDLTEKTKIRVETLAG IIVPELIIEKDQVEAVQVDMGQPGLGSTDIPITGVNKDKVIKEKLEVENEEYEITAVS MGNPHTVIFVDDADDFPVTEVGPKIEEHPRFPEKTNVEFIEVMNRSEIKMRVWERGAG VTLACGTGACGSTVASILNDYTNQKVEVHLLGGDLTIEWTEDSHVYMTGPAEEVFVGE WIK" misc_feature complement(1955704..1956534) /locus_tag="Acear_1859" /note="diaminopimelate epimerase; Provisional; Region: dapF; PRK00450" /db_xref="CDD:179032" misc_feature complement(1956160..1956528) /locus_tag="Acear_1859" /note="Diaminopimelate epimerase; Region: DAP_epimerase; cl14668" /db_xref="CDD:187422" misc_feature complement(1955728..1956066) /locus_tag="Acear_1859" /note="Diaminopimelate epimerase; Region: DAP_epimerase; cl14668" /db_xref="CDD:187422" gene complement(1956663..1958417) /locus_tag="Acear_1860" /db_xref="GeneID:9513917" CDS complement(1956663..1958417) /locus_tag="Acear_1860" /EC_number="2.7.1.40" /note="COGs: COG0469 Pyruvate kinase; InterProIPR001697:IPR018209:IPR018313:IPR015793:IPR 015794:IPR008279:IPR015813:IPR015795:IPR011037; KEGG: hor:Hore_03220 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PEP-utilising protein mobile region; SPTR: B8D1K6 Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase" /codon_start=1 /transl_table=11 /product="pyruvate kinase" /protein_id="YP_003828428.1" /db_xref="GI:302392608" /db_xref="GeneID:9513917" /translation="MRRTKIVCTIGPGSDDEETLSQLIDAGMNVARMNFSHGNHQEHK ERIQRVRNLAAQKGKPVAIMLDTKGPEVRTGMLKNDEEVTLKEGEKFVLTTEEIEGDD KRVSVSYNDLPKDVEVGGTILIDDGLIELEIDNISDTEVECTVLNGGQLGLRKGVNLP GVSVNLPAITDKDAADIKFGIELDVDFIAASFIRKASDVLEIKRILEKDDADIKIISK IESEEGVENIDEIIEVSSGIMVARGDLGVEIPTEQVPAAQKMMIDKCNREGKPVITAT QMLDSMIRNPRPTRAEASDVANAILDGTDATMLSGETAMGEYPVRSVETMAKIAQEIE ESEQYAKQMAQKNMVPPRTVTDSISYSTCETAHDLGASAIITSTSSGHTARMVSKYRP YSPVIAATPNPKVCKQLALSWGVKPIVVEDTASTDDMFEVSVRGALEAGYINMGDLIV LTAGTPVGVSGTTNLLRVHIVGEAIVRGTGIGKTAFSGRVCIVDDPDEANEKMKEGDV LVTHSTDRDFVPAMKKAEAVITEEAGLTSHAAIVSLNLGIPAVVGAYDAMEMLEDGEL VTVDSVRGLVYKGEANVL" misc_feature complement(1956666..1958417) /locus_tag="Acear_1860" /note="pyruvate kinase; Provisional; Region: PRK06354" /db_xref="CDD:180540" misc_feature complement(1957005..1958417) /locus_tag="Acear_1860" /note="Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors. Like other allosteric enzymes, PK has a high substrate affinity R state and a low...; Region: Pyruvate_Kinase; cl09155" /db_xref="CDD:195807" misc_feature complement(order(1957176..1957184,1957188..1957190, 1957194..1957199,1957206..1957208,1957239..1957241, 1957245..1957247,1957251..1957253,1957407..1957412, 1957416..1957418,1957503..1957505,1957509..1957511, 1957605..1957607,1957617..1957622,1957674..1957676, 1957782..1957784,1957815..1957817,1957836..1957838, 1957860..1957862,1957905..1957919,1957926..1957928, 1957944..1957949,1958199..1958210,1958232..1958234, 1958238..1958240,1958406..1958411)) /locus_tag="Acear_1860" /note="domain interfaces; other site" /db_xref="CDD:29370" misc_feature complement(order(1957590..1957592,1957686..1957688, 1957758..1957760,1957764..1957766,1957842..1957844, 1958220..1958222,1958316..1958318,1958322..1958324)) /locus_tag="Acear_1860" /note="active site" /db_xref="CDD:29370" misc_feature complement(1956666..1956995) /locus_tag="Acear_1860" /note="PEP-utilising enzyme, mobile domain; Region: PEP-utilizers; cl01586" /db_xref="CDD:194171" gene complement(1958498..1959496) /locus_tag="Acear_1861" /db_xref="GeneID:9513918" CDS complement(1958498..1959496) /locus_tag="Acear_1861" /EC_number="2.7.1.11" /note="COGs: COG0205 6-phosphofructokinase; InterPro IPR012828:IPR015912:IPR000023:IPR012003; KEGG: hor:Hore_03210 6-phosphofructokinase; PFAM: phosphofructokinase; PRIAM: 6-phosphofructokinase; SPTR: B8D1K5 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; TIGRFAM: 6-phosphofructokinase" /codon_start=1 /transl_table=11 /product="6-phosphofructokinase" /protein_id="YP_003828429.1" /db_xref="GI:302392609" /db_xref="GeneID:9513918" /translation="MDKIGVLTSGGDAPGMNAAVRAVTRKAIYEGLEIIGIKRGYTGV IESDFMVMDRGSVADIIHRGGTMLHSARCEEFRTEAGRKKAIEQLKYGGIEGLIVIGG DGSFKGAQLLSEESDIKVVGVPATIDNDIACTDYSIGYDTAMNTILDAINKIRDTATS HERTFVVETMGRHSGILTLMSGLAGGAESILVPEIDFSLEEVCEKLNHGYERGKLHSI ILVAEGIEQDFTSSTDNNESQAFAIAEEISNRTGFETRVTVLGHLQRGGIPTAQDRIL GSRLGAAAVDLLLEGETNKMVGVVHEEVKSFPIEESLTRSKDLNKEIYKLADILSL" misc_feature complement(1958504..1959496) /locus_tag="Acear_1861" /note="6-phosphofructokinase; Provisional; Region: PRK03202" /db_xref="CDD:179553" misc_feature complement(1958504..1959490) /locus_tag="Acear_1861" /note="Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases...; Region: PFK; cl00204" /db_xref="CDD:193705" misc_feature complement(order(1958702..1958704,1958711..1958713, 1958828..1958830,1958981..1958989,1959107..1959109, 1959113..1959115,1959119..1959121,1959173..1959178, 1959182..1959190,1959281..1959283,1959374..1959376, 1959464..1959466)) /locus_tag="Acear_1861" /note="active site" /db_xref="CDD:29437" misc_feature complement(order(1959173..1959178,1959182..1959190, 1959281..1959283,1959374..1959376,1959464..1959466)) /locus_tag="Acear_1861" /note="ADP/pyrophosphate binding site [chemical binding]; other site" /db_xref="CDD:29437" misc_feature complement(order(1958510..1958512,1958594..1958596, 1958639..1958641,1958660..1958662,1958672..1958677, 1958855..1958857,1958939..1958941,1958945..1958950, 1959032..1959034,1959041..1959043,1959053..1959055, 1959089..1959091,1959311..1959313,1959320..1959322, 1959335..1959337,1959422..1959424,1959434..1959436)) /locus_tag="Acear_1861" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29437" misc_feature complement(order(1958849..1958857,1958861..1958863, 1958933..1958935,1958939..1958941,1959032..1959034, 1959320..1959325,1959332..1959337,1959422..1959424, 1959434..1959436)) /locus_tag="Acear_1861" /note="allosteric effector site; other site" /db_xref="CDD:29437" misc_feature complement(order(1958702..1958704,1958711..1958713, 1958729..1958731,1958828..1958830,1958981..1958989, 1959008..1959010,1959107..1959109,1959113..1959115, 1959119..1959121)) /locus_tag="Acear_1861" /note="fructose-1,6-bisphosphate binding site; other site" /db_xref="CDD:29437" gene complement(1959530..1960486) /locus_tag="Acear_1862" /db_xref="GeneID:9513919" CDS complement(1959530..1960486) /locus_tag="Acear_1862" /EC_number="6.4.1.2" /note="COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; InterPro IPR001095:IPR011763:IPR020582; KEGG: hor:Hore_03200 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; PRIAM: Acetyl-CoA carboxylase; SPTR: B8D1K4 Acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase carboxyltransferase subunit alpha" /protein_id="YP_003828430.1" /db_xref="GI:302392610" /db_xref="GeneID:9513919" /translation="MANNNLEFEKPLLELEDKIKELKQFMEEKDIDLTDEIETLKHRS AQLKEEIYDELEPWQILKLARHAERPTTFDYIDLICDDFIELHGDRNFGDDQALIGGI GKIGAQPLTIIGHQKGKDTKDNLNRNFGMAHPEGYRKALRLMKQAEKFNRPILSLVNT PGAFPGIGAEERGQAEAIARNMREMGSLEVPIIVVITGEGGSGGALGIGVGDKVMMME YTYYSVCSPEACAAILWKDAAEAKTAAKALKLTAEDLLELEIIDDIVPEPIGGAHKDF TKSGELLKEAVLDSLQEVEQLSIKEMLDQRYDKFRRIGEYNE" misc_feature complement(1959533..1960486) /locus_tag="Acear_1862" /note="Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; Region: ACCA; cl00513" /db_xref="CDD:189112" gene complement(1960476..1961384) /locus_tag="Acear_1863" /db_xref="GeneID:9513920" CDS complement(1960476..1961384) /locus_tag="Acear_1863" /note="COGs: COG0777 Acetyl-CoA carboxylase beta subunit; InterPro IPR000438:IPR011762; KEGG: hor:Hore_03190 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; SPTR: B8D1K3 Acetyl-CoA carboxylase, carboxyl transferase, beta subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase carboxyltransferase subunit alpha" /protein_id="YP_003828431.1" /db_xref="GI:302392611" /db_xref="GeneID:9513920" /translation="MFKDWFGGKKSKYVTVKRQREEDDENKKRKEKGKGQIKEELWTK CKNCGEIIFNKKLAENLKVCLECGYHFRLNAQERLNILVDEGEFKEYDKKLETTNPLD FPDYEEKLKKYQEKTGLNEAAVTGEAKIGGHEVILGIVDANFLMGSMNSVVGEKITRA IEAALDKELPLIIISGGGGGARMYEGMLSLMQMPKTSLALSRLDKAGHLYISVLTDPT YGGVSASFASLGDIIIAEADAKIGFAGPRVIKQTINKDLPDGFQTSEFQLEHGMVDKV VNRKDMKDILVRTLDIHSLRGEADGQ" misc_feature complement(1960506..1961264) /locus_tag="Acear_1863" /note="Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; Region: ACCA; cl00513" /db_xref="CDD:189112" gene complement(1961734..1963161) /locus_tag="Acear_1864" /db_xref="GeneID:9513921" CDS complement(1961734..1963161) /locus_tag="Acear_1864" /note="COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: dhd:Dhaf_1525 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: C1TNX5 Na+/proline symporter; PFAM: Sodium:solute symporter family" /codon_start=1 /transl_table=11 /product="Na+/solute symporter" /protein_id="YP_003828432.1" /db_xref="GI:302392612" /db_xref="GeneID:9513921" /translation="MNVTLLIVIVYIMLLYGLAWYSTKLKSGEEIVEEFFLADRGFPA YIVAAMLTGLAVGGASTIGVAESAYTQGISAGMYNAAWAVGAIVVGFTAASRLRDLTV TTIPELFGNYYDEAGRVIAVIGQIIIQIVITSLQYIAGGAILASLLPELFSVNMGALL TAIVLGGVALIGGYWGAGLTNLINVIVIYIGVIIGAIMSISKAGGISNIVANLPVGLQ WFDPVAGVGIGIIIAWFIVMITQTHSTQAVVQISFAAKDGQTAKRGFILGGLIILPIG FICALFGIVAAVQFPGLEDPAMALPKVILNLPAIISGLTLAGLWASSISTTVGLLLGS STLVVNDIWKNYIQTDITQKQEHIMSRIVVVVITALTFLLAITVEGILDTLLIGLTLT TAYTVVVLFTIFAPKLCKKSAAFWTIGTGIIFLFVWVFVPAIRIVSHPIFLAWPIAIG TFLLVSMLDKTPANIPNEVVESEST" misc_feature complement(<1962028..1963065) /locus_tag="Acear_1864" /note="Sodium:solute symporter family; Region: SSF; cl00456" /db_xref="CDD:186007" gene complement(1963236..1964033) /locus_tag="Acear_1865" /db_xref="GeneID:9513922" CDS complement(1963236..1964033) /locus_tag="Acear_1865" /EC_number="4.2.1.20" /note="COGs: COG0159 Tryptophan synthase alpha chain; InterPro IPR002028:IPR018204:IPR011060:IPR013785; KEGG: sat:SYN_01941 tryptophan synthase alpha chain; PFAM: tryptophan synthase alpha chain; PRIAM: Tryptophan synthase; SPTR: C7IS91 Tryptophan synthase, alpha subunit; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit" /codon_start=1 /transl_table=11 /product="tryptophan synthase, alpha subunit" /protein_id="YP_003828433.1" /db_xref="GI:302392613" /db_xref="GeneID:9513922" /translation="MNRIEEKFKQLKKQEETALMPYITAGDPTLGFTKKLIKEFEASG VDMIELGVPYSDPLADGPTIQQAAQRALSAGADLEQIFGLIEEVRTEVEIPIILMGYY NSFYKYSLQEVVSKAEEVGVDGLIIPDLPPEEAEEVEKFKNGDQLSSIFLLAPTSSEE RMELVNQQSDGFIYCVSTLGVTGARNKLSSQLQGFLARVRQHSDQPLAVGFGISAPKQ AAQVAKYAEGVIVGSAIIDRIAENLDQREEVMLKEVSSLVKRLKKAL" misc_feature complement(1963239..1963985) /locus_tag="Acear_1865" /note="tryptophan synthase; Region: PLN02591" /db_xref="CDD:178201" misc_feature complement(1963248..1963982) /locus_tag="Acear_1865" /note="Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are...; Region: Tryptophan_synthase_alpha; cd04724" /db_xref="CDD:73386" misc_feature complement(order(1963335..1963340,1963398..1963403, 1963485..1963490,1963512..1963514,1963842..1963844, 1963854..1963856,1963887..1963889)) /locus_tag="Acear_1865" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73386" misc_feature complement(order(1963488..1963490,1963731..1963733, 1963854..1963856,1963887..1963889)) /locus_tag="Acear_1865" /note="active site" /db_xref="CDD:73386" misc_feature complement(order(1963731..1963733,1963854..1963856, 1963887..1963889)) /locus_tag="Acear_1865" /note="catalytic residues [active]" /db_xref="CDD:73386" misc_feature complement(order(1963551..1963553,1963560..1963568, 1963572..1963574,1963632..1963634,1963641..1963643, 1963647..1963652,1963716..1963718,1963725..1963727, 1963836..1963841,1963848..1963850,1963857..1963859, 1963863..1963874)) /locus_tag="Acear_1865" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:73386" gene complement(1964026..1965216) /locus_tag="Acear_1866" /db_xref="GeneID:9513923" CDS complement(1964026..1965216) /locus_tag="Acear_1866" /EC_number="4.2.1.20" /note="COGs: COG0133 Tryptophan synthase beta chain; InterPro IPR006654:IPR006653:IPR001926; KEGG: pmo:Pmob_1208 tryptophan synthase subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: A9BHQ3 Tryptophan synthase, beta subunit; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit" /codon_start=1 /transl_table=11 /product="tryptophan synthase, beta chain" /protein_id="YP_003828434.1" /db_xref="GI:302392614" /db_xref="GeneID:9513923" /translation="MQNKRGYFGEFGGRYVPETLMAALDELEAAYDKYKEDDEFQAEL ESYLKDYVGRPSPLYYAERLTKKLGGAKIYLKREDLNHTGAHKINNTIGQVLLADRMG KERIIAETGAGQHGVATATAAALFNLDCEIYMGVKDIERQRMNVFRMELLGAEVVPVE SGSKTLKDATNEAIRDWVTNVEDTHYIIGSVVGPHPYPEIVRDFQAVIGEETKEQMLE LEGRLPDYLVACVGGGSNAMGIFYPFVEDEEVEMIGVEAAGLGLDTAKHAASLNAGSQ GVLHGSMSYILQDSDGQIIPAHSISAGLDYPGVGPEHSHYFETGRADYESITDEESLQ GFQLLSEIEGIIPALESAHAVAYLSELAPKLDSNEIVVLNLSGRGDKDVEAVANRLEE EADE" misc_feature complement(1964035..1965201) /locus_tag="Acear_1866" /note="tryptophan synthase, beta chain; Region: PLN02618" /db_xref="CDD:178227" misc_feature complement(1964059..1965150) /locus_tag="Acear_1866" /note="Tryptophan synthase-beta: Trptophan synthase is a bifunctional enzyme that catalyses the last two steps in the biosynthesis of L-tryptophan via its alpha and beta reactions. In the alpha reaction, indole 3-glycerol phosphate is cleaved reversibly to...; Region: Trp-synth_B; cd06446" /db_xref="CDD:107207" misc_feature complement(order(1964089..1964091,1964167..1964169, 1964509..1964523,1964647..1964649,1964875..1964877, 1964956..1964961)) /locus_tag="Acear_1866" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:107207" misc_feature complement(1964956..1964958) /locus_tag="Acear_1866" /note="catalytic residue [active]" /db_xref="CDD:107207" gene complement(1965206..1965835) /locus_tag="Acear_1867" /db_xref="GeneID:9513924" CDS complement(1965206..1965835) /locus_tag="Acear_1867" /EC_number="5.3.1.24" /note="COGs: COG0135 phosphoribosylanthranilate isomerase; InterPro IPR001240:IPR011060:IPR013785; KEGG: gur:Gura_1736 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: phosphoribosylanthranilate isomerase; SPTR: C6MQI3 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase" /codon_start=1 /transl_table=11 /product="phosphoribosylanthranilate isomerase" /protein_id="YP_003828435.1" /db_xref="GI:302392615" /db_xref="GeneID:9513924" /translation="MAATRIKVCGITNLDDARQAVRLGVDSIGFIFANSPRQVTAEQV HQIINKLPPFINLTGVFVDEDIEEVQKTADYCGLDTLQLHGTETPEYCKQLKAWKVIK AFRVREKLEPKRMAAYEIAGYLLDTYQPKRLGGTGKTFNWDLAVEAEEVGPIILAGGL NPDNITTAVKKVEPYGVDINSGVESSPGQKDQQKLKRVVNNIRRLEYAE" misc_feature complement(1965230..1965820) /locus_tag="Acear_1867" /note="Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP). Most PRAIs are monomeric...; Region: PRAI; cd00405" /db_xref="CDD:73365" misc_feature complement(order(1965293..1965298,1965302..1965304, 1965458..1965460,1965584..1965586,1965590..1965592, 1965743..1965745,1965809..1965811,1965815..1965817)) /locus_tag="Acear_1867" /note="active site" /db_xref="CDD:73365" gene complement(1965822..1966616) /locus_tag="Acear_1868" /db_xref="GeneID:9513925" CDS complement(1965822..1966616) /locus_tag="Acear_1868" /EC_number="4.1.1.48" /note="COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR001468:IPR013798:IPR011060:IPR013785; KEGG: amt:Amet_1080 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: A6TM74 Indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase" /codon_start=1 /transl_table=11 /product="indole-3-glycerol phosphate synthase" /protein_id="YP_003828436.1" /db_xref="GI:302392616" /db_xref="GeneID:9513925" /translation="MFLDKIVANTKEEVKQRKEEISLTELKERLRPVDEVRDFKAALT NSVLGLIAEIKQASPSKGLIRKDFNPVEIAKKYSQNRVEAISILTDEEFFQGSLEYLQ QVREATDLPLLRKDFIIDPYQVYEAQAHGADAVLLIVNILTEKKLIELISLIRKLGME ALVEVHTAGELKTACRAGAEIVGINNRNLKTFETDIEQTLQLQELLPADKVIVSESGI SSKDDIEKLTDTGVDAVLIGEALMRSDDLSNRIAELLGRSDGNGSN" misc_feature complement(1965855..1966502) /locus_tag="Acear_1868" /note="Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the...; Region: IGPS; cd00331" /db_xref="CDD:73363" misc_feature complement(order(1965900..1965905,1965966..1965971, 1966050..1966052,1966056..1966058,1966062..1966064, 1966125..1966127,1966203..1966205,1966266..1966268, 1966272..1966274,1966335..1966337,1966437..1966445, 1966452..1966454,1966458..1966460)) /locus_tag="Acear_1868" /note="active site" /db_xref="CDD:73363" misc_feature complement(order(1966062..1966064,1966125..1966127, 1966272..1966274,1966452..1966454,1966458..1966460)) /locus_tag="Acear_1868" /note="ribulose/triose binding site [chemical binding]; other site" /db_xref="CDD:73363" misc_feature complement(order(1965900..1965905,1965966..1965968, 1966452..1966454)) /locus_tag="Acear_1868" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:73363" misc_feature complement(order(1966050..1966052,1966056..1966058, 1966335..1966337,1966440..1966442)) /locus_tag="Acear_1868" /note="substrate (anthranilate) binding pocket [chemical binding]; other site" /db_xref="CDD:73363" misc_feature complement(order(1966050..1966052,1966203..1966205, 1966266..1966268,1966272..1966274,1966335..1966337)) /locus_tag="Acear_1868" /note="product (indole) binding pocket [chemical binding]; other site" /db_xref="CDD:73363" gene complement(1966607..1967635) /locus_tag="Acear_1869" /db_xref="GeneID:9513926" CDS complement(1966607..1967635) /locus_tag="Acear_1869" /EC_number="2.4.2.18" /note="COGs: COG0547 Anthranilate phosphoribosyltransferase; InterPro IPR005940:IPR017459:IPR000312; KEGG: cth:Cthe_0873 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like; PRIAM: Anthranilate phosphoribosyltransferase; SPTR: C7HEV0 Anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family, a/b domain; glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="anthranilate phosphoribosyltransferase" /protein_id="YP_003828437.1" /db_xref="GI:302392617" /db_xref="GeneID:9513926" /translation="MRKFIKQVTNGKNLDVGQAAEAMELIMSGEATKAQIGSFITGLR MKGETVPEITGCAEVMRKKATAVKPKTSDVIDTCGTGGDGVGTFNISTTTAFVAIGGG VPVAKHGNRSVSSKSGSADVLEELGVNLDLTAPQVAEAVDRIGIGFMYAPNFHQAMKH AIKPRKEIGIRTVFNILGPLTNPARAEYQVLGVYDPELTSVLAHVLGNLGVKRAFVVH GAGGLDEISNLGETKVSYLSDGEVEDFTIHPRDFGLSLAEVGDIKGGNAAENAQITLD ILQGKSGPKREIILLNSAAAFLVAGKVDRLEEGIDLAAEVIDTGQALDKLEALIDYTQ RKQDQKCS" misc_feature complement(1966631..1967635) /locus_tag="Acear_1869" /note="anthranilate phosphoribosyltransferase; Provisional; Region: trpD; PRK00188" /db_xref="CDD:178920" misc_feature complement(1967441..1967635) /locus_tag="Acear_1869" /note="Glycosyl transferase family, helical bundle domain; Region: Glycos_trans_3N; pfam02885" /db_xref="CDD:145834" misc_feature complement(1966667..1967374) /locus_tag="Acear_1869" /note="Glycosyl transferase family, a/b domain; Region: Glycos_transf_3; pfam00591" /db_xref="CDD:144256" gene complement(1967678..1969150) /locus_tag="Acear_1870" /db_xref="GeneID:9513927" CDS complement(1967678..1969150) /locus_tag="Acear_1870" /EC_number="4.1.3.27" /note="COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterProIPR005256:IPR006805:IPR015890:IPR005801:IPR 019999; KEGG: sat:SYN_01947 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: Q2LUE5 Anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages; anthranilate synthase component I, archaeal clade" /codon_start=1 /transl_table=11 /product="anthranilate synthase, component I" /protein_id="YP_003828438.1" /db_xref="GI:302392618" /db_xref="GeneID:9513927" /translation="MYYPNREEFMAKADKGNLVPVYSEVVADLETPVSAFKKLDTGEY SYLLESVEGGEKVGRYSFIGIDPFLIFSYQQGKVKIEEGNRVEEHRTEEPLKELEEVL DRYQPVEVDGLPRFSGGAVGYLGYELVTSFEEIPQPESGLEVPDALFMLTDTILIFDH VKHKIKIVANARVNGDPKTAYQEAVERIEGLKSRLNRSLGEQKPPISLRQKSKQNEFE FKSNLTKSEFTAKVEQAKEYIKSGDIFQVVLSQRLEVLTEAEPFDVYRSLRRVNPSPY MYYLNFADLELIGASPEMLVRVEDGNVENRPIAGTRRRGETEEEDNALAEEMLNDKKE RAEHTMLVDLGRNDVGRVSRYGSVEVDEFMEIEKYSHVMHLVSNIRGELRENYSSFDA LKACFPAGTVSGAPKIRAMEIISELEPTKRGPYAGAIGYFGFDGNLDSCITIRTMLFY DQKVYLQAGAGIVADSQPEAEYYETLNKAEALLAALELVD" misc_feature complement(1967717..1969072) /locus_tag="Acear_1870" /note="anthranilate synthase component I, non-proteobacterial lineages; Region: trpE_most; TIGR00564" /db_xref="CDD:161932" misc_feature complement(1968650..1969069) /locus_tag="Acear_1870" /note="Anthranilate synthase component I, N terminal region; Region: Anth_synt_I_N; pfam04715" /db_xref="CDD:191067" misc_feature complement(1967717..1968481) /locus_tag="Acear_1870" /note="chorismate binding enzyme; Region: Chorismate_bind; cl10555" /db_xref="CDD:195988" gene complement(1969137..1969952) /locus_tag="Acear_1871" /db_xref="GeneID:9513928" CDS complement(1969137..1969952) /locus_tag="Acear_1871" /EC_number="2.5.1.54" /note="COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268:IPR006218:IPR013785; KEGG: hmo:HM1_1923 phospho-2-dehydro-3-deoxyheptonate aldolase, PFAM: DAHP synthetase I/KDSA; SPTR: B0TFQ1 phospho-2-dehydro-3-deoxyheptonate aldolase, TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase" /codon_start=1 /transl_table=11 /product="3-deoxy-D-arabinoheptulosonate-7-phosphate synthase" /protein_id="YP_003828439.1" /db_xref="GI:302392619" /db_xref="GeneID:9513928" /translation="MSQPAKELYPLAGKSDKLEKSIIGIGDIGIGSGEPTVIADFCAI ESREKFFTAAVSLKEAGAEVLRYELQLSPYSSQGLEDLSLEMLAEVKEETGLLIATEV MDIRQVESIAEYVDILQIGSQNMQNYPLLREVGNYNLPVILKRGMSATIREWLLAAEY ILDAGNQDVILCEQGIKCFQQYTENLLDISAVPIIRQLSHLPVIIDPSQAAGRSDLII PLAKAGLAAGVDGVMVEVHFETDETFCTRDQSLTLSQFEDLVEVIGANRNVLS" misc_feature complement(1969158..1969922) /locus_tag="Acear_1871" /note="NeuB family; Region: NeuB; cl00496" /db_xref="CDD:186036" gene complement(1970158..1970394) /locus_tag="Acear_1872" /db_xref="GeneID:9513929" CDS complement(1970158..1970394) /locus_tag="Acear_1872" /note="InterPro IPR000824:IPR016031; KEGG: hor:Hore_03170 tryptophan RNA-binding attenuator protein; PFAM: tryptophan RNA-binding attenuator protein; SPTR: B8D1K1 Tryptophan RNA-binding attenuator protein; PFAM: Tryptophan RNA-binding attenuator protein" /codon_start=1 /transl_table=11 /product="tryptophan RNA-binding attenuator protein" /protein_id="YP_003828440.1" /db_xref="GI:302392620" /db_xref="GeneID:9513929" /translation="MPNRVEEDYVVIKALEDGVTIIGLTRGEQTKFHHTEKLDAGEVM LAQFTEHTSAIKIRGKADIITEHGEATSGDVDAE" misc_feature complement(1970173..1970394) /locus_tag="Acear_1872" /note="Tryptophan RNA-binding attenuator protein; Region: TrpBP; cl03437" /db_xref="CDD:186573" gene complement(1970494..1971474) /locus_tag="Acear_1873" /db_xref="GeneID:9513930" CDS complement(1970494..1971474) /locus_tag="Acear_1873" /note="COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR018357:IPR001451:IPR011004; KEGG: asu:Asuc_1962 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; SPTR: C0KTY6 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Bacterial transferase hexapeptide (three repeats)" /codon_start=1 /transl_table=11 /product="UDP-3-O-(3-hydroxymyristoyl)" /protein_id="YP_003828441.1" /db_xref="GI:302392621" /db_xref="GeneID:9513930" /translation="MEVNQADYYQIRTTVGGTESYKLRDKLSDYDLHYSVKVIRGPEG RKVDLSVVVKGEMLEEMMALIENICLDPIITIVPVTDFKDQKEIREWRKVTLMDGASV SSLAELYDGVYLDHGSRVVGNAILNEEVKIGQNTFVGTGVIIRSNTVIGDNCHIGTGA IIGDNVEIGNNVKIEENVTIRSDVKIGNDVSIGTAANLESNVTIRDKIRIGPLARIFN VGRKRAKLESADDRKVISTVIEGGTFIGSGAIVGGTVGKNVMVGSNAIVHTANIESEV TVGSGAVVPYGSKVESGLTVIGSPARPIEDYQQEKKLFEFLAEKYEDELE" misc_feature complement(1970935..1971255) /locus_tag="Acear_1873" /note="Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes...; Region: LbetaH; cl00160" /db_xref="CDD:193687" misc_feature complement(1970623..1971141) /locus_tag="Acear_1873" /note="Acetyltransferase (isoleucine patch superfamily) [General function prediction only]; Region: WbbJ; COG0110" /db_xref="CDD:30459" misc_feature complement(order(1970950..1970952,1970956..1970958, 1970962..1970964,1970974..1970976,1971004..1971006, 1971010..1971015,1971028..1971030,1971058..1971060, 1971064..1971066,1971082..1971084,1971112..1971114, 1971118..1971120,1971130..1971132,1971136..1971138)) /locus_tag="Acear_1873" /note="putative trimer interface [polypeptide binding]; other site" /db_xref="CDD:100038" misc_feature complement(1970551..1971087) /locus_tag="Acear_1873" /note="Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes...; Region: LbetaH; cl00160" /db_xref="CDD:193687" misc_feature complement(order(1970950..1970952,1970968..1970970, 1971004..1971006,1971019..1971024,1971028..1971030)) /locus_tag="Acear_1873" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:100038" misc_feature complement(order(1970782..1970784,1970830..1970835, 1970848..1970850,1970902..1970904,1970932..1970934, 1970938..1970940,1970950..1970952,1970956..1970958)) /locus_tag="Acear_1873" /note="putative trimer interface [polypeptide binding]; other site" /db_xref="CDD:100038" misc_feature complement(order(1970782..1970784,1970839..1970844, 1970848..1970850)) /locus_tag="Acear_1873" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:100038" gene complement(1971509..1972000) /locus_tag="Acear_1874" /db_xref="GeneID:9513931" CDS complement(1971509..1972000) /locus_tag="Acear_1874" /note="COGs: COG1267 Phosphatidylglycerophosphatase A and related protein; InterPro IPR007686; KEGG: amt:Amet_3072 phosphatidylglycerophosphatase A; PFAM: phosphatidylglycerophosphatase A; SPTR: A6TSP4 Phosphatidylglycerophosphatase A; PFAM: Phosphatidylglycerophosphatase A" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphatase A" /protein_id="YP_003828442.1" /db_xref="GI:302392622" /db_xref="GeneID:9513931" /translation="MKELVINLLKQRGVKLKAIAEIVYELQVPYNPNLTLEDCIINVE RVFEKREVQHTILTGLALDKMAEDDKLEEPLATIIKTDEPLYGIDESLAMTIANIYGT IGVTSFGYLDKEKTGIIKKLDNSQGRVDTFLDDIVAGIASAASARLAHQLKQEEQEQA EIS" misc_feature complement(1971551..1971988) /locus_tag="Acear_1874" /note="Phosphatidylglycerophosphatase A; a bacterial membrane-associated enzyme involved in lipid metabolism; Region: PgpA; cd06971" /db_xref="CDD:133477" misc_feature complement(order(1971551..1971556,1971662..1971667, 1971671..1971676,1971680..1971688,1971692..1971700, 1971707..1971709,1971716..1971721,1971725..1971730, 1971737..1971745,1971752..1971754,1971815..1971820, 1971827..1971832,1971839..1971841,1971911..1971913, 1971977..1971979)) /locus_tag="Acear_1874" /note="tetramer interfaces [polypeptide binding]; other site" /db_xref="CDD:133477" misc_feature complement(order(1971596..1971601,1971608..1971610, 1971731..1971736,1971743..1971745)) /locus_tag="Acear_1874" /note="binuclear metal-binding site [ion binding]; other site" /db_xref="CDD:133477" gene complement(1972051..1975440) /locus_tag="Acear_1875" /db_xref="GeneID:9513932" CDS complement(1972051..1975440) /locus_tag="Acear_1875" /note="COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004805:IPR004013:IPR011708:IPR004365:IPR 016195:IPR003141; KEGG: pth:PTH_2220 DNA polymerase III DnaE; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; SPTR: A5D017 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)" /codon_start=1 /transl_table=11 /product="DNA polymerase III catalytic subunit, DnaE type" /protein_id="YP_003828443.1" /db_xref="GI:302392623" /db_xref="GeneID:9513932" /translation="MSGFVHLHCHTEYSLLDGAARIGELVTQAADYGMPALAITDHGN MYGAVEFYKAAKDAGIKPIIGSEVYVAPESRFNQKHNRADSPYHLVLLAKNNQGYRNL LKLVSKGYLEGFYYKPQIDLELLRKYNEGLICLSGCLAGRIARGLLNEQQQQVKEMIS TYQDIFGENDFYLELQDQGLRKEKIINHSLIELGEEMDVPLVATNDVHYLNQEDAQAH DVLLCIQTGKLLTTEDRMKFPNDEFYLKSGQEMADIFSEVPQAIENTVEIAKRCNVEL DFDQTYLPYYDVPEEKNLSSYLRELCLKGARKRYGEVTDEVQERLDYELEIINEMGYP AYFLIVWDFIEYAKEKGIMVGPGRGSAAGSLVSYVLGITDIDPLEHGLIFERFLNPQR VSMPDIDIDFCYQRRDEVIDYVTEKYGQDRVAQIITFGTMAARAVVRDVGRVLDLSYA QVDKIAKLIPFDADLDEALESSQELKDLCQKKDEIKELIDYAQKLEGLPRHASTHAAG VVISKEELTEYTPLQQNKGEVTTQYPMGDLEAIGLLKMDFLGLRTLTVINNTLEIIER TQGIKLDLDEIPLDDEQTYQLLQTGNTEGLFQIESNLFQRLIADLKPTRFEDLIALLA LGRPGPLGSGMVDDFIKRRHGEAEVEYPHADLEEILEETYGVILYQEQVMRIANEIAG YSLGEADILRRGMGKKKPELLKKHRQKFIDGALDKGYSEELANELFDLMEYFGGYGFN KSHSAAYAFVSYRTAYLKTYYPVEYMAALLSSIMGNSDKVARYIEECNRMGIEVLPPD VNESEVRFTVVGDRIRFGLEAVKNVGQKAIEEIIRARQEEGAFESLTDFCQKVFLGKV NQRVIESLIKAGAFDSLGAYRSQMLTVIEDLYEQAHKIQKEKGNGQQSFGDFLNADEF GNVEVKLPEMSEYSHDQLLAMEREYLGLYISGHPIDKYQDLLAENRFESIVAIKDLAD KEEVRFGGIINSINQIITKNGKDMAFLELEDRTGQLEVVVFPEQYNKFQELLIPNEFI MGQGRLDQNEEGAKLIAHSLQKAPEKKLYLKVKEISSAELQQLAAALKKFSGSTPVYL VLKLNREKIIISTSSQFSVKLEPGLENRLQEISGVEDYILA" misc_feature complement(1972069..1975440) /locus_tag="Acear_1875" /note="DNA polymerase III DnaE; Reviewed; Region: dnaE; PRK06826" /db_xref="CDD:180713" misc_feature complement(1975225..1975425) /locus_tag="Acear_1875" /note="DNA polymerase alpha chain like domain; Region: POLIIIAc; smart00481" /db_xref="CDD:128757" misc_feature complement(1973287..1974555) /locus_tag="Acear_1875" /note="Bacterial DNA polymerase III alpha subunit; Region: DNA_pol3_alpha; pfam07733" /db_xref="CDD:191832" misc_feature complement(1972288..1972512) /locus_tag="Acear_1875" /note="DnaE_OBF: A subfamily of OB folds corresponding to the C-terminal OB-fold nucleic acid binding domain of Thermus aquaticus and Escherichia coli type C replicative DNA polymerase III alpha subunit (DnaE). The DNA polymerase holoenzyme of E. coli...; Region: DnaE_OBF; cd04485" /db_xref="CDD:72957" misc_feature complement(order(1972288..1972290,1972342..1972344, 1972348..1972350,1972354..1972356,1972510..1972512)) /locus_tag="Acear_1875" /note="generic binding surface II; other site" /db_xref="CDD:72957" misc_feature complement(order(1972303..1972311,1972330..1972338, 1972357..1972359,1972402..1972404,1972408..1972416, 1972432..1972434,1972438..1972449,1972489..1972497)) /locus_tag="Acear_1875" /note="generic binding surface I; other site" /db_xref="CDD:72957" gene 1975573..1975884 /locus_tag="Acear_1876" /db_xref="GeneID:9513933" CDS 1975573..1975884 /locus_tag="Acear_1876" /note="KEGG: hor:Hore_03130 hypothetical protein; SPTR: B8D1J7 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828444.1" /db_xref="GI:302392624" /db_xref="GeneID:9513933" /translation="MQRIIIAFFTSLGVLLGGVLVGSLASAFTQQSPIKLMFKLAKDI KLWAIATAIGGTFSNLRVLEGGFMEGKISLVAKQLLVLISAFLGAQLAIWLITILTGG K" gene 1975888..1976361 /locus_tag="Acear_1877" /db_xref="GeneID:9513934" CDS 1975888..1976361 /locus_tag="Acear_1877" /note="KEGG: hor:Hore_03120 hypothetical protein; SPTR: B8D1J6 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828445.1" /db_xref="GI:302392625" /db_xref="GeneID:9513934" /translation="MKFRFLTLTRHELYQLLATFILGLIIGALVINLITARQIDQLIY KNKELTNQIQAQNDELEKLEESLANRKWKVVQNIKIIIETEENKHIKQQLEEKLYELL KSIIGRQMNKIDGTLISNTIDDRVILVDSANYKINLIWLLLQQETIVKVEATSTD" gene complement(1976358..1977548) /locus_tag="Acear_1878" /db_xref="GeneID:9513935" CDS complement(1976358..1977548) /locus_tag="Acear_1878" /EC_number="2.6.1.1" /note="COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterProIPR004838:IPR004839:IPR015424:IPR015421:IPR 001176; KEGG: cth:Cthe_0755 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: A3DDG1 L-aspartate aminotransferase; PFAM: Aminotransferase class I and II" /codon_start=1 /transl_table=11 /product="L-aspartate aminotransferase apoenzyme" /protein_id="YP_003828446.1" /db_xref="GI:302392626" /db_xref="GeneID:9513935" /translation="MYLTSKVQKIEESPTLAISSKATQMKNQGLDIVGLGAGEPDFET PDHIKEAAIEAIEAGFTNYTTTSGILELKEAICDKLKRENGLEYSPEEIIVSSGAKHS LYNTLQAICGGGDEIIVPTPYWVSYPQQIKLAGGEAAIVETEEENGFKLKPEDLRAGI TDKTRGVILNSPSNPTGAVYTEDELTEIAEIAVENGIYIIADEIYEKIYYDEKPVSIA SLGKEVRDLTILINGVSKAYSMTGWRIGYAAADSRIVSAMSKLQSHSTSNPNSIAQKA SIAALEGSQDPVDKMVAAFEERRNYIVNRINRINGLSAQNPKGAFYLFVNGTELIGST VADEEITDDYKLADVLLTETRVAVVPGSAFGAPGYLRLSYAASLSELTKALDRIEDLL GIEA" misc_feature complement(1976373..1977545) /locus_tag="Acear_1878" /note="aspartate aminotransferase; Provisional; Region: PRK08361" /db_xref="CDD:169403" misc_feature complement(1976379..1977446) /locus_tag="Acear_1878" /note="Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine...; Region: AAT_like; cd00609" /db_xref="CDD:99734" misc_feature complement(order(1976817..1976819,1976841..1976846, 1976850..1976852,1976934..1976936,1977027..1977029, 1977177..1977179,1977249..1977257)) /locus_tag="Acear_1878" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(1976721..1976723,1976730..1976732, 1976817..1976825,1976955..1976957,1977147..1977149, 1977246..1977248)) /locus_tag="Acear_1878" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(1976841..1976843) /locus_tag="Acear_1878" /note="catalytic residue [active]" /db_xref="CDD:99734" gene complement(1977657..1979477) /locus_tag="Acear_1879" /db_xref="GeneID:9513936" CDS complement(1977657..1979477) /locus_tag="Acear_1879" /note="COGs: COG1217 membrane GTPase involved in stress response; InterProIPR005225:IPR006298:IPR000795:IPR004161:IPR 000640:IPR009022:IPR009000; KEGG: cth:Cthe_1007 GTP-binding protein TypA; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; SPTR: C6Q0X9 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain" /codon_start=1 /transl_table=11 /product="GTP-binding protein TypA" /protein_id="YP_003828447.1" /db_xref="GI:302392627" /db_xref="GeneID:9513936" /translation="MELITRDDIRNIAIIAHVDHGKTTLVDSMLKQSGVFHEQKQVEN RVMDTNDLERERGITILSKNTAIDYQGTKINIVDTPGHADFGGEVERILKMVDGVLLI VDGFEGPMPQTKFVLRKALALDLKPVVVINKIDRSNARPYEVEDEVLELFIELEASAE QLEFPVVYASGLEGFAREEIGEENNDLEPLFQEIITKIPPPAVDLTAPLQMVVTTIEY NDYVGRLAVGKIKRGRVSNGAVVSICRSDGSIITDQISSLYKYSGLGRKEVEEAKAGD IVAIAGLEEINIGETIADKDAPEPLPFIEIEKPTVTMTFTTNDSPFAGQEGEFLTSRH LQARFDKELESNVALDIAETESPDTWRVSGRGLLHLSVLIETMRREGYEFQVSKPDVI TKKENGQKLEPIKELVIDIPEEFMGTIMEEIGQRKGQMQNMTQLNADRVRLEFGIPAR GLIGFRSDFLTITKGEGIINHTFSHYAPYRGELPERQHGSLIATEEGEVTRFGIFNAQ ERGTIFVKPGTRVYRGMIIGANARQNDLDINICKQKKLDNMRSGSADEAIDLIPSTDL SLEEALNYIDDDEYVEVTPHNIRLRKKILNAKQRRKSNKN" misc_feature complement(1978875..1979456) /locus_tag="Acear_1879" /note="TypA (tyrosine phosphorylated protein A)/BipA subfamily. BipA is a protein belonging to the ribosome-binding family of GTPases and is widely distributed in bacteria and plants. BipA was originally described as a protein that is induced in Salmonella...; Region: TypA_BipA; cd01891" /db_xref="CDD:133291" misc_feature complement(1977672..1979453) /locus_tag="Acear_1879" /note="GTP-binding protein TypA/BipA; Region: TypA_BipA; TIGR01394" /db_xref="CDD:162336" misc_feature complement(1979409..1979432) /locus_tag="Acear_1879" /note="G1 box; other site" /db_xref="CDD:133291" misc_feature complement(order(1979037..1979039,1979049..1979051, 1979157..1979162,1979229..1979234,1979286..1979291, 1979385..1979390,1979397..1979399,1979406..1979411, 1979421..1979423,1979427..1979429)) /locus_tag="Acear_1879" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:133291" misc_feature complement(order(1978962..1978970,1979073..1979075, 1979079..1979084,1979406..1979423)) /locus_tag="Acear_1879" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133291" misc_feature complement(1979289..1979324) /locus_tag="Acear_1879" /note="Switch I region; other site" /db_xref="CDD:133291" misc_feature complement(1979301..1979303) /locus_tag="Acear_1879" /note="G2 box; other site" /db_xref="CDD:133291" misc_feature complement(1979235..1979246) /locus_tag="Acear_1879" /note="G3 box; other site" /db_xref="CDD:133291" misc_feature complement(1979184..1979240) /locus_tag="Acear_1879" /note="Switch II region; other site" /db_xref="CDD:133291" misc_feature complement(1979073..1979084) /locus_tag="Acear_1879" /note="G4 box; other site" /db_xref="CDD:133291" misc_feature complement(1978962..1978970) /locus_tag="Acear_1879" /note="G5 box; other site" /db_xref="CDD:133291" misc_feature complement(1978596..1978853) /locus_tag="Acear_1879" /note="BipA_TypA_II: domain II of BipA (also called TypA) having homology to domain II of the elongation factors (EFs) EF-G and EF-Tu. BipA is a highly conserved protein with global regulatory properties in Escherichia coli. BipA is phosphorylated on a...; Region: BipA_TypA_II; cd03691" /db_xref="CDD:58082" misc_feature complement(1978038..1978274) /locus_tag="Acear_1879" /note="BipA_TypA_C: a C-terminal portion of BipA or TypA having homology to the C terminal domains of the elongation factors EF-G and EF-2. A member of the ribosome binding GTPase superfamily, BipA is widely distributed in bacteria and plants. BipA is a...; Region: BipA_TypA_C; cd03710" /db_xref="CDD:58063" gene complement(1979510..1980271) /locus_tag="Acear_1880" /db_xref="GeneID:9513937" CDS complement(1979510..1980271) /locus_tag="Acear_1880" /note="COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR010140:IPR004013:IPR016195:IPR003141; KEGG: hor:Hore_11520 histidinol-phosphatase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: B8CX85 Histidinol-phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family" /codon_start=1 /transl_table=11 /product="histidinol phosphate phosphatase HisJ family" /protein_id="YP_003828448.1" /db_xref="GI:302392628" /db_xref="GeneID:9513937" /translation="MLVDYHVHPIAHDDGDHSKDNLRKFVKQAKKKGIKEVGIADHNR YHNMFQLDNIQVVNQEFNDVELKFGIEMDYTPGKEEEIADFLTQFNFDFVIGSIHYLG DWMFDHPDYIDEYNNRDIDEVYERYFNYLSQAARSGLFDIIGHLDLIKVFDFHPQSDI LEYVGPALQAIAKEKLCIELNTNGLNKPVEEIYPSRKILEEAYKLEIPVTLSSDAHIS KRVGENLDSAQDLLKDIGYEKIATFKDRQRKLVSI" misc_feature complement(1979513..1980271) /locus_tag="Acear_1880" /note="histidinol-phosphatase; Provisional; Region: PRK07328" /db_xref="CDD:180932" misc_feature complement(1980053..1980262) /locus_tag="Acear_1880" /note="DNA polymerase alpha chain like domain; Region: POLIIIAc; smart00481" /db_xref="CDD:128757" gene complement(1980288..1980689) /locus_tag="Acear_1881" /db_xref="GeneID:9513938" CDS complement(1980288..1980689) /locus_tag="Acear_1881" /note="COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: cth:Cthe_0103 hypothetical protein; PFAM: protein of unknown function UPF0047; SPTR: A3DBL5 Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: conserved hypothetical protein TIGR00149" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828449.1" /db_xref="GI:302392629" /db_xref="GeneID:9513938" /translation="MVYGLTISTNSKTEMIDITNKVQSLISDLSLSSGICTLFVPHTT AAVTINENADPTVQQDILKELNKVIPFEDDYQHLEGNSAAHIKSTLVGCSQQIIIEQG ELALGTWQGIYFCEFDGPRSRKLKIKLVGKE" misc_feature complement(1980300..1980644) /locus_tag="Acear_1881" /note="Uncharacterised protein family UPF0047; Region: UPF0047; cl00439" /db_xref="CDD:193820" gene 1980941..1981522 /locus_tag="Acear_1882" /db_xref="GeneID:9513939" CDS 1980941..1981522 /locus_tag="Acear_1882" /note="COGs: COG1584 membrane protein; InterPro IPR000791; KEGG: dae:Dtox_2192 GPR1/FUN34/YaaH family protein; PFAM: GPR1/FUN34/yaaH family protein; SPTR: C1TI37 Predicted membrane protein, COG1584; PFAM: GPR1/FUN34/yaaH family" /codon_start=1 /transl_table=11 /product="GPR1/FUN34/yaaH family protein" /protein_id="YP_003828450.1" /db_xref="GI:302392630" /db_xref="GeneID:9513939" /translation="MANNKIANPAPLGLAGFALTTFVLSFYNAEILSTGEAIVFPLAL FYGGLAQFMAGMWEFKTGNTFGATAFTSYGAWWMFFALFEYSITLGWIDLGANAATSV GLVLIAWGIFTFYMWLGTFKLNRALWLIFLTLWITFFLLALGDLVAPKFGILGGYMGI ICALIAWYTSAAEIINDVSDETVLPLGEKNISA" misc_feature 1980953..1981507 /locus_tag="Acear_1882" /note="GPR1/FUN34/yaaH family; Region: Grp1_Fun34_YaaH; cl00685" /db_xref="CDD:193908" gene complement(1981584..1983389) /locus_tag="Acear_1883" /db_xref="GeneID:9513940" CDS complement(1981584..1983389) /locus_tag="Acear_1883" /note="COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR013352:IPR017900:IPR000283:IPR001041:IPR 017896:IPR019574:IPR001450:IPR004108:IPR003149:IPR009016; KEGG: pth:PTH_2010 hydrogenase subunit; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; SPTR: A5D0Q2 Hypothetical hydrogenase subunit; TIGRFAM: hydrogenase, Fe-only; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenases, Fe-only" /codon_start=1 /transl_table=11 /product="NAD(P)-dependent iron-only hydrogenase catalytic subunit" /protein_id="YP_003828451.1" /db_xref="GI:302392631" /db_xref="GeneID:9513940" /translation="MVSVTVDGQEVEVEEGATVLDAAEKLDIDIPTLCYLEDLNEPGS CRVCLVEIEGEENYQPSCVYNVTDGLEVRTNTPGVIEARKKMIELLLSDHPFDCLTCA ANQNCELQSIAKQHGIRDIDFDGERNEFPVDDLSPALVREPSKCIRCRRCISVCSEIQ EVHIYDINERGFDSVAAPAFNESLMDTPCITCGQCIMVCPTGALHGQDDKQKVWDALA DDTKHVVIQTAPAIRVTIGEMFGMEVGSLVTGKLVSALKRVGFDRVFDDCFGADVVVM EEGRELMERLESGKDLPQFTSCCPGWVKFCESFYPSLLDNLSSCKSPQQVFGALAKTY YAEKAGIDPDNIFSVSTMPCVAKKYEAQRPEMDDSGRQDVDAVLTTRELGEMIKQIGI DIENLPEQEYDEPMGYATGAGVIFGSTGGVMEATLRTVYEKLTGERLEDFELQKVRSQ DFNEAEVKLDEDRSINVAVARGTGNARKLIHRVLSGEADYDFVEVMACPAGGCVGGGG QPIYSGRDRWARMVEDRVARADGLLKSDGRKDIKVAHENPFVKELYDSFLEKPHGEKS QKLLHTSYTDRQLYTHEERYSEQKGKEMKEADKNN" misc_feature complement(1983171..1983386) /locus_tag="Acear_1883" /note="2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis...; Region: fer2; cd00207" /db_xref="CDD:29262" misc_feature complement(order(1983204..1983209,1983246..1983257, 1983261..1983263,1983288..1983290,1983297..1983302)) /locus_tag="Acear_1883" /note="catalytic loop [active]" /db_xref="CDD:29262" misc_feature complement(order(1983204..1983206,1983246..1983248, 1983255..1983257,1983288..1983290)) /locus_tag="Acear_1883" /note="iron binding site [ion binding]; other site" /db_xref="CDD:29262" misc_feature complement(1983021..1983143) /locus_tag="Acear_1883" /note="NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Region: NADH-G_4Fe-4S_3; pfam10588" /db_xref="CDD:192636" misc_feature complement(1981893..1982912) /locus_tag="Acear_1883" /note="hydrogenase, Fe-only; Region: Fe_only_hydrog; TIGR02512" /db_xref="CDD:162896" misc_feature complement(1981893..1982756) /locus_tag="Acear_1883" /note="Iron only hydrogenase large subunit, C-terminal domain; Region: Fe_hyd_lg_C; pfam02906" /db_xref="CDD:190471" misc_feature complement(1981659..1981826) /locus_tag="Acear_1883" /note="Iron hydrogenase small subunit; Region: Fe_hyd_SSU; pfam02256" /db_xref="CDD:190260" gene complement(1983410..1985212) /locus_tag="Acear_1884" /db_xref="GeneID:9513941" CDS complement(1983410..1985212) /locus_tag="Acear_1884" /EC_number="1.6.99.5" /note="COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR017900:IPR017896:IPR011538:IPR019554:IPR 019575:IPR001450:IPR012336:IPR012335; KEGG: tpd:Teth39_1457 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: B0KAE4 NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain" /codon_start=1 /transl_table=11 /product="NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein" /protein_id="YP_003828452.1" /db_xref="GI:302392632" /db_xref="GeneID:9513941" /translation="MSIEAEVLVCSGTSCFSSGGPEIYNNLLENLEEKGLTGEVKLVQ TGCFGFCEKGPIVVIYQEDNPGGIFYCQVEPEDAQRIVEEHLIKDEIIEELLYEEPET GRKVAQYEDMGFYKYQQRIALRNCGLIEPHNIREYIARDGYQALGKALTEMTPEEIID EVKTSKLRGRGGGGFPTGVKWELTKSAEGSPKFIICNADEGDPGAFMDRSIVEGDPHS VIEGLAIGAYVIGANQGYVYVRAEYPLAVDRLEKAIESARELGVLGEDIFGSGFDFNV EIRVGAGAFVCGEETALIHSVQGDRGDPHGKPPYPANDGLWDQPTVINNVETLANIPQ IILNGGDWFSHIGTEESTGTKVFALAGDIHNTGLIEVPMGTTLREVIFNLGGGIPDDK EFKAAQTGGPSGGCLPREKLDISMDYDSLLEVGSMMGSGGLIVMDEDTCMVDVARFYL DFTQDEACGKCTPGRVGTKRLLEMLNRIVSGEAEENILDKLEALCHEIKKTALCGLGQ SAPNPILSTLEYFRDEYEAHVFDKYCPAGVCKDLASYKIDEEACEACGVCKEECPVSA ITGSKEEGYEIDPEICESCGICEEECPFEVITRG" misc_feature complement(1984967..1985194) /locus_tag="Acear_1884" /note="Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:; Region: TRX_Fd_family; cd02980" /db_xref="CDD:48529" misc_feature complement(order(1985075..1985083,1985189..1985191)) /locus_tag="Acear_1884" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48529" misc_feature complement(order(1985060..1985062,1985072..1985074, 1985168..1985170,1985183..1985185)) /locus_tag="Acear_1884" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:48529" misc_feature complement(1983626..1984885) /locus_tag="Acear_1884" /note="NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion]; Region: NuoF; COG1894" /db_xref="CDD:32078" misc_feature complement(1984211..1984729) /locus_tag="Acear_1884" /note="Respiratory-chain NADH dehydrogenase 51 Kd subunit; Region: Complex1_51K; pfam01512" /db_xref="CDD:144926" misc_feature complement(1983992..1984147) /locus_tag="Acear_1884" /note="SLBB domain; Region: SLBB; pfam10531" /db_xref="CDD:192616" misc_feature complement(1983758..1983886) /locus_tag="Acear_1884" /note="NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Region: NADH_4Fe-4S; pfam10589" /db_xref="CDD:192637" misc_feature complement(1983509..1983580) /locus_tag="Acear_1884" /note="4Fe-4S binding domain; Region: Fer4; cl02805" /db_xref="CDD:194449" gene complement(1985229..1985723) /locus_tag="Acear_1885" /db_xref="GeneID:9513942" CDS complement(1985229..1985723) /locus_tag="Acear_1885" /note="COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012336:IPR012335; KEGG: ate:Athe_1295 NADH dehydrogenase (ubiquinone) 24 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: B9MRU1 NADH dehydrogenase (Ubiquinone) 24 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit" /codon_start=1 /transl_table=11 /product="NAD(P)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein" /protein_id="YP_003828453.1" /db_xref="GI:302392633" /db_xref="GeneID:9513942" /translation="MMQATEEIKELSEDEKFEKLDEIIEQNRGQEGILINVLHQAQQI FGHLSRKIQVHIAEGLDIPFSKVYAVISFYSLFSTEMRGKYTIEVCTGTACYVKGAED ILEQFKTELEIEPGETTEDGLFTLETTRCIGACGMAPVIKVGDDTHGRLKEDQVSDLL DKYE" misc_feature complement(1985232..1985639) /locus_tag="Acear_1885" /note="NADH-quinone oxidoreductase, E subunit; Region: nuoE_fam; TIGR01958" /db_xref="CDD:131013" misc_feature complement(1985235..1985474) /locus_tag="Acear_1885" /note="TRX-like [2Fe-2S] Ferredoxin (Fd) family, NADH:ubiquinone oxidoreductase (Nuo) subunit E subfamily; Nuo, also called respiratory chain Complex 1, is the entry point for electrons into the respiratory chains of bacteria and the mitochondria of...; Region: TRX_Fd_NuoE; cd03064" /db_xref="CDD:48613" misc_feature complement(order(1985334..1985342,1985460..1985462, 1985466..1985468)) /locus_tag="Acear_1885" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:48613" misc_feature complement(order(1985319..1985321,1985331..1985333, 1985439..1985441,1985454..1985456)) /locus_tag="Acear_1885" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:48613" gene complement(1985826..1986224) /locus_tag="Acear_1886" /db_xref="GeneID:9513943" CDS complement(1985826..1986224) /locus_tag="Acear_1886" /note="COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: hor:Hore_08960 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: B8CWI3 ferric uptake regulator, Fur family; PFAM: ferric uptake regulator family" /codon_start=1 /transl_table=11 /product="ferric uptake regulator, Fur family" /protein_id="YP_003828454.1" /db_xref="GI:302392634" /db_xref="GeneID:9513943" /translation="MGTQPKRRMTKQRKKILEVLRNTDSHPTADWIYDQVKQEMPNIS LGTVYRNLNVLKEMEKIMELNYGSSHSHFDGNAENHYHFTCLECGKICDVSEPVHSDL DQKVEEEMGCSISHHRLEFFGTCAECKEEE" misc_feature complement(1985850..1986194) /locus_tag="Acear_1886" /note="Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators; Region: Fur_like; cd07153" /db_xref="CDD:133478" misc_feature complement(order(1985946..1985948,1985979..1985981, 1985985..1985987,1986003..1986005,1986147..1986149)) /locus_tag="Acear_1886" /note="metal binding site 2 [ion binding]; metal-binding site" /db_xref="CDD:133478" misc_feature complement(1986051..1986095) /locus_tag="Acear_1886" /note="putative DNA binding helix; other site" /db_xref="CDD:133478" misc_feature complement(order(1985874..1985876,1985925..1985927, 1985982..1985984,1985988..1985990)) /locus_tag="Acear_1886" /note="metal binding site 1 [ion binding]; metal-binding site" /db_xref="CDD:133478" misc_feature complement(order(1985853..1985879,1985883..1985891, 1985916..1985921,1985967..1985975)) /locus_tag="Acear_1886" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133478" misc_feature complement(order(1985850..1985852,1985961..1985963, 1985970..1985972)) /locus_tag="Acear_1886" /note="structural Zn2+ binding site [ion binding]; other site" /db_xref="CDD:133478" gene 1986602..1986820 /locus_tag="Acear_1887" /db_xref="GeneID:9513944" CDS 1986602..1986820 /locus_tag="Acear_1887" /note="COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: deb:DehaBAV1_1377 NifU domain-containing protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: Q3ZZW9 NifU protein, homolog; PFAM: NifU-like domain" /codon_start=1 /transl_table=11 /product="nitrogen-fixing NifU domain protein" /protein_id="YP_003828455.1" /db_xref="GI:302392635" /db_xref="GeneID:9513944" /translation="MKEEVEAALDKIRPSLEADGGGVELIDVEEGVVKVKLTGACGGC PMSQMTLKNGIERVLKEEIPEVEKVESV" misc_feature 1986614..1986817 /locus_tag="Acear_1887" /note="NifU-like domain; Region: NifU; cl00484" /db_xref="CDD:153799" gene 1986947..1987024 /locus_tag="Acear_R0088" /db_xref="GeneID:9513945" tRNA 1986947..1987024 /locus_tag="Acear_R0088" /product="tRNA-Pro" /db_xref="GeneID:9513945" gene 1987042..1987128 /locus_tag="Acear_R0089" /db_xref="GeneID:9513946" tRNA 1987042..1987128 /locus_tag="Acear_R0089" /product="tRNA-Tyr" /db_xref="GeneID:9513946" gene complement(1987149..1988813) /locus_tag="Acear_1888" /db_xref="GeneID:9513947" CDS complement(1987149..1988813) /locus_tag="Acear_1888" /note="COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: gka:GK1598 AMP-binding domain protein; PFAM: AMP-dependent synthetase and ligase; SPTR: C6QUY9 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme" /codon_start=1 /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_003828456.1" /db_xref="GI:302392636" /db_xref="GeneID:9513947" /translation="MPKVLEMTLGELLDRQAIKYSENDAVVYTEKEIRYSYREFRDVC NQAAKGFMELGIDVGDHVAIWAHNQPEWLITQFATGKMGGVLVTVNTNYRAMELEYLL KQSDAETLILSEGMRADYPEILYEICPELKSSEPGELKSENLPHLKNVIYIGDGDVPA GMYHWNDIMELGKQASNVKLRKRQNSLNPDDVINMQYTSGTTGFPKGVMLTHTNIIAD ANYIADCMEFTNEDRLCIPVPFFHCFGCVLGTLVCVTKGATMVPIVKFKPEPVLETIE AEECTAVHGVPTMFISELEYPDFDQYDLSSLRTGIMAGSPCPMKVMKQVINKMGAEEI TIAYGQTEASPVITQTRTDNSLERRVSTVGRALPNVEVKIVNPDTGKEVPPGVQGELC TRGFHVMEGYYKMPEETEETIDGDGWLHTGDLAIMDKDGYCKITGRLKNMIIRGGENV YPREVEEHFYDHPKIKDVEVVGIPDEKYGEEVMAYIQLKDGEEATAEEIFNYFKDRIS WHKLPKKIEVVNNYPMTASGKVQKYKLRERAIENYNLHDVEEFETA" misc_feature complement(1987191..1988813) /locus_tag="Acear_1888" /note="AMP-binding domain protein; Validated; Region: PRK08315" /db_xref="CDD:181380" misc_feature complement(1987203..1988714) /locus_tag="Acear_1888" /note="Acyl-protein synthetase, LuxE; Region: LuxE; cl10450" /db_xref="CDD:186997" gene complement(1988948..1989448) /locus_tag="Acear_1889" /db_xref="GeneID:9513948" CDS complement(1988948..1989448) /locus_tag="Acear_1889" /note="COGs: COG2032 Cu/Zn superoxide dismutase; InterPro IPR001424; KEGG: amt:Amet_4517 superoxide dismutase, copper/zinc binding; PFAM: superoxide dismutase copper/zinc binding; SPTR: A6TWM1 Superoxide dismutase [Cu-Zn]; PFAM: Copper/zinc superoxide dismutase (SODC)" /codon_start=1 /transl_table=11 /product="superoxide dismutase copper/zinc binding protein" /protein_id="YP_003828457.1" /db_xref="GI:302392637" /db_xref="GeneID:9513948" /translation="MIKLKEEVDFKNSDRIAKAIIKGGPLAPGLKGVVYFKAVPGGTR VIVEVKGLPPFQAAQNDQPPIGPHGFHIHEFGTCKVGDPDDPFQAAGDHYNPTNQPHG NHAGDLPVLFSNNGFARMSFFTNKFEVEDVIGRSVIIHQNPDDYRSQPAGAAGKRLAC GVIEWS" misc_feature complement(1988960..1989397) /locus_tag="Acear_1889" /note="Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide radicals to molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the...; Region: Cu-Zn_Superoxide_Dismutase; cd00305" /db_xref="CDD:48338" misc_feature complement(order(1989047..1989052,1989218..1989226, 1989344..1989346,1989350..1989352,1989383..1989385, 1989389..1989391)) /locus_tag="Acear_1889" /note="E-class dimer interface [polypeptide binding]; other site" /db_xref="CDD:48338" misc_feature complement(order(1989113..1989115,1989317..1989319)) /locus_tag="Acear_1889" /note="P-class dimer interface [polypeptide binding]; other site" /db_xref="CDD:48338" misc_feature complement(order(1989029..1989031,1989128..1989130, 1989137..1989139,1989170..1989172,1989230..1989232, 1989236..1989238)) /locus_tag="Acear_1889" /note="active site" /db_xref="CDD:48338" misc_feature complement(order(1989029..1989031,1989170..1989172, 1989230..1989232,1989236..1989238)) /locus_tag="Acear_1889" /note="Cu2+ binding site [ion binding]; other site" /db_xref="CDD:48338" misc_feature complement(order(1989128..1989130,1989137..1989139, 1989146..1989148,1989170..1989172)) /locus_tag="Acear_1889" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:48338" gene complement(1990178..1991023) /locus_tag="Acear_1890" /db_xref="GeneID:9513949" CDS complement(1990178..1991023) /locus_tag="Acear_1890" /note="KEGG: hor:Hore_03980 transmembrane anti-sigma factor; SPTR: B8D1T0 Putative transmembrane anti-sigma factor" /codon_start=1 /transl_table=11 /product="transmembrane anti-sigma factor" /protein_id="YP_003828458.1" /db_xref="GI:302392638" /db_xref="GeneID:9513949" /translation="MRILKCKGLIILLGILLIVLVTTSCRAPSIGLQDSVEPQSLKRP VQTKEKGKELLTEEELQSTGKDRKIIKEANLNLERNDLAEAYEEVQELVKKYNGYIID SHQWQNNNQKKYYRYTLRIPQQNFDSAIAGLKDLGKLKDERFTGRDVTREYIDLKARL SNFKAQEERYLELLDQAKDVEDILKIEKELNRVRTEIEQLEGQLKYYDNRVDLATINV QIVQPSPIIGSNWQIINSFKDAVRGFVKSINLIIILIGALLPWLLFLFLILMVGYFIF KVKRK" gene 1991224..1991424 /locus_tag="Acear_1891" /db_xref="GeneID:9513950" CDS 1991224..1991424 /locus_tag="Acear_1891" /note="COGs: COG1278 Cold shock protein; InterProIPR019844:IPR002059:IPR016027:IPR012340:IPR 012156:IPR011129; KEGG: hor:Hore_05400 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B8D271 Putative cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain" /codon_start=1 /transl_table=11 /product="cold-shock DNA-binding protein family" /protein_id="YP_003828459.1" /db_xref="GI:302392639" /db_xref="GeneID:9513950" /translation="MATGTVKWFDSNKGYGFIERPEEDDVFVHFSAIQDDGFKDLEEG EEVEFEVVEGDKGLQAENVVKL" misc_feature 1991230..1991418 /locus_tag="Acear_1891" /note="Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein...; Region: CSP_CDS; cd04458" /db_xref="CDD:88424" misc_feature order(1991245..1991247,1991272..1991274,1991302..1991304, 1991389..1991391) /locus_tag="Acear_1891" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:88424" misc_feature order(1991263..1991283,1991299..1991310) /locus_tag="Acear_1891" /note="RNA-binding motif; other site" /db_xref="CDD:88424" gene 1991482..1991682 /locus_tag="Acear_1892" /db_xref="GeneID:9513951" CDS 1991482..1991682 /locus_tag="Acear_1892" /note="COGs: COG1278 Cold shock protein; InterProIPR019844:IPR002059:IPR016027:IPR012340:IPR 012156:IPR011129; KEGG: pjd:Pjdr2_4583 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: C6D8L8 Cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain" /codon_start=1 /transl_table=11 /product="cold-shock DNA-binding protein family" /protein_id="YP_003828460.1" /db_xref="GI:302392640" /db_xref="GeneID:9513951" /translation="METGTVKWFDSNKGYGFIERPEEDDVFVHFSAIQEDGFKDLEEG EEVEFNIVEGDKGLQAEDVVKL" misc_feature 1991485..1991676 /locus_tag="Acear_1892" /note="Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein...; Region: CSP_CDS; cd04458" /db_xref="CDD:88424" misc_feature order(1991503..1991505,1991530..1991532,1991560..1991562, 1991647..1991649) /locus_tag="Acear_1892" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:88424" misc_feature order(1991521..1991541,1991557..1991568) /locus_tag="Acear_1892" /note="RNA-binding motif; other site" /db_xref="CDD:88424" gene complement(1991812..1992387) /locus_tag="Acear_1893" /db_xref="GeneID:9513952" CDS complement(1991812..1992387) /locus_tag="Acear_1893" /note="COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR017719:IPR019752:IPR002869; KEGG: nth:Nther_2697 indolepyruvate ferredoxin oxidoreductase, beta subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: B2A2E5 Indolepyruvate ferredoxin oxidoreductase, beta subunit; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit" /codon_start=1 /transl_table=11 /product="indolepyruvate ferredoxin oxidoreductase, beta subunit" /protein_id="YP_003828461.1" /db_xref="GI:302392641" /db_xref="GeneID:9513952" /translation="MSKTTNIMLTGVGGQGVLLASEIISQAALEEGFDVKKSEVHGMA QRGGSVVSNVTYGEKVYSPLIAKGEADLLLAFEPLEALRWANYLKSDGKIITNTQRID PLPVAIGEAEYPANIMDRLEETGYEIISIDALDIATDLGNQKVVNTVLIGQFTNFSEI SQEVFKKVVKESVPPKTVDLNLKAFNAGNEY" misc_feature complement(1991824..1992384) /locus_tag="Acear_1893" /note="Pyruvate ferredoxin/flavodoxin oxidoreductase; Region: POR; cl00546" /db_xref="CDD:193862" misc_feature complement(1991815..1992375) /locus_tag="Acear_1893" /note="2-oxoglutarate ferredoxin oxidoreductase subunit gamma; Validated; Region: PRK08537" /db_xref="CDD:181462" gene complement(1992380..1994137) /locus_tag="Acear_1894" /db_xref="GeneID:9513953" CDS complement(1992380..1994137) /locus_tag="Acear_1894" /note="COGs: COG4231 Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits; InterProIPR017721:IPR017896:IPR002880:IPR011766:IPR 001450:IPR009014; KEGG: nth:Nther_2698 indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B2A2E6 Indolepyruvate ferredoxin oxidoreductase, alpha subunit; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit" /codon_start=1 /transl_table=11 /product="indolepyruvate ferredoxin oxidoreductase, alpha subunit" /protein_id="YP_003828462.1" /db_xref="GI:302392642" /db_xref="GeneID:9513953" /translation="MEKVLLSGNEAVARGAYEAGVKVATAYPGTPSTEILENIVQYKD DIHCQWSPNEKVSMEVAIGAAFGGVRSLVAMKHVGLNVAADPFMTLSYTGIRGGLVVV SADDPSMHSSQNEQDNRHYARFAKVPMLEPADSQEAKDFVGYALDISEEFDTPVILRT TTRISHAKTVVEPGGREEYSVPEEFEKDPDKFVMVPANAYKRHPKIEERLNRVGDYAE TSPLNRVEGQNQELGIITSGVTYNHAKEVFPEASFLKLGITYPLPEKKIKKFAKQVDK LYVIEELDPFLENQIKAMGIEVTGKDKLPLTYELNTKVIRESFIEEKVEDTIVEESKE LPPRPPALCPGCPHRGVFYSLNKLGVTVTGDIGCYALGVVPPLSAMDTLVCMGASIGN AFGLELALGDKIKGDVVGVIGDSTYMHSGITGLIDIMYNKGASTIVILDNRITAMTGH QENPVTGKTLMGEDTVEVDLVELNKALGVENVRTVDPYDLGETKKVITEELEKDEISV VVAQRSCVLLDSVERKAPYTVDSDKCQDCGQCLDIGCPALVKEEGEAKINDYLCTGCG VCTEICVFDAIVRDGGSDE" misc_feature complement(1992407..1994134) /locus_tag="Acear_1894" /note="indolepyruvate ferredoxin oxidoreductase, alpha subunit; Region: IOR_alpha; TIGR03336" /db_xref="CDD:163218" misc_feature complement(1993652..1994116) /locus_tag="Acear_1894" /note="Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins; Region: TPP_PYR_PFOR_IOR-alpha_like; cd07034" /db_xref="CDD:132917" misc_feature complement(order(1993775..1993780,1993811..1993816, 1993859..1993861,1993871..1993873,1993880..1993882, 1993931..1993933,1993937..1993939,1993946..1993954, 1993958..1993963,1993985..1993996,1994027..1994029, 1994036..1994038,1994048..1994050,1994066..1994071)) /locus_tag="Acear_1894" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132917" misc_feature complement(order(1993871..1993873,1993880..1993882, 1993931..1993933,1993937..1993939,1993946..1993954, 1993958..1993963,1993985..1993996,1994027..1994032, 1994048..1994050,1994054..1994059,1994066..1994071)) /locus_tag="Acear_1894" /note="PYR/PP interface [polypeptide binding]; other site" /db_xref="CDD:132917" misc_feature complement(order(1993976..1993978,1994054..1994056)) /locus_tag="Acear_1894" /note="TPP binding site [chemical binding]; other site" /db_xref="CDD:132917" misc_feature complement(order(1993820..1993822,1994048..1994050)) /locus_tag="Acear_1894" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:132917" misc_feature complement(1992593..1993096) /locus_tag="Acear_1894" /note="TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit. IOR catalyzes the oxidative decarboxylation of arylpyruvates, such as indolepyruvate or phenylpyruvate, which are generated by the...; Region: TPP_IOR_alpha; cd02008" /db_xref="CDD:48171" misc_feature complement(order(1992806..1992808,1992812..1992814, 1992890..1992901,1992980..1992982)) /locus_tag="Acear_1894" /note="TPP-binding site; other site" /db_xref="CDD:48171" gene complement(1994356..1994859) /locus_tag="Acear_1895" /db_xref="GeneID:9513954" CDS complement(1994356..1994859) /locus_tag="Acear_1895" /note="COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563:IPR009002:IPR012349; KEGG: hor:Hore_11280 flavoredoxin; PFAM: flavin reductase domain protein FMN-binding; SPTR: B8CX61 Putative flavoredoxin; PFAM: Flavin reductase like domain" /codon_start=1 /transl_table=11 /product="flavin reductase domain protein FMN-binding protein" /protein_id="YP_003828463.1" /db_xref="GI:302392643" /db_xref="GeneID:9513954" /translation="MQEVEYNQYLTEALDAISKGAFLTVKAGGELNTMTIGWANVGYI WGKPFFTVLVRHSRHTFELIEKTDEFTVSIPLESDMREELNFCGTKSGRNYDKFIECS LTALSGQVVETPVIGGCDLHYECKIKFTQVMDEDNLDADYQAEWYPEDDYHTLYFGEI VKSYLTE" misc_feature complement(1994359..1994799) /locus_tag="Acear_1895" /note="Flavin Reductases; Region: FlaRed; cl00801" /db_xref="CDD:193940" gene complement(1994871..1995062) /locus_tag="Acear_1896" /db_xref="GeneID:9513955" CDS complement(1994871..1995062) /locus_tag="Acear_1896" /note="InterPro IPR018191:IPR004370; KEGG: mmx:MmarC6_1743 4-oxalocrotonate tautomerase; PFAM: 4-oxalocrotonate tautomerase; SPTR: A9AB31 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme" /codon_start=1 /transl_table=11 /product="4-oxalocrotonate tautomerase family enzyme" /protein_id="YP_003828464.1" /db_xref="GI:302392644" /db_xref="GeneID:9513955" /translation="MPIITLEGPELTKEQKKELVKSFTESASEVIGFPEEKFIVMLKE TESENVGVGGELLSEKKKD" misc_feature complement(1994889..1995059) /locus_tag="Acear_1896" /note="4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one...; Region: 4Oxalocrotonate_Tautomerase; cl00235" /db_xref="CDD:185852" misc_feature complement(order(1994952..1994954,1995054..1995059)) /locus_tag="Acear_1896" /note="active site 1 [active]" /db_xref="CDD:29603" misc_feature complement(order(1994970..1994975,1994985..1994987, 1994994..1994999,1995006..1995008,1995039..1995059)) /locus_tag="Acear_1896" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29603" misc_feature complement(order(1994895..1994921,1994928..1994933, 1994937..1994951,1994955..1994960,1994991..1994993, 1995000..1995005,1995012..1995017,1995042..1995044, 1995048..1995050)) /locus_tag="Acear_1896" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:29603" misc_feature complement(order(1994913..1994915,1995042..1995044)) /locus_tag="Acear_1896" /note="active site 2 [active]" /db_xref="CDD:29603" gene complement(1995152..1995610) /locus_tag="Acear_1897" /db_xref="GeneID:9513956" CDS complement(1995152..1995610) /locus_tag="Acear_1897" /note="COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR004440:IPR001537:IPR016914; KEGG: cth:Cthe_0127 RNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: A3DBN9 RNA methyltransferase, TrmH family, group 2; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: SpoU rRNA methylase family; TIGRFAM: rRNA methylase, , group 2" /codon_start=1 /transl_table=11 /product="RNA methyltransferase, TrmH family, group 2" /protein_id="YP_003828465.1" /db_xref="GI:302392645" /db_xref="GeneID:9513956" /translation="MNIVLYQPEIPPNTGNIARTCACTGASLHLIRPLGFSTDEKAVR RAGLDYWDKVDVNYYDSFRELEEKYSDHNFYFATKFASKFYTEIEYKSDDFLVFGQET AGLPEEITERYKENCIRIPMLKEVRALNLANSVSIILYEALRQNGFDNLV" misc_feature complement(1995155..1995610) /locus_tag="Acear_1897" /note="SpoU rRNA Methylase family; Region: SpoU_methylase; cl00362" /db_xref="CDD:193788" gene complement(1995638..1996093) /locus_tag="Acear_1898" /db_xref="GeneID:9513957" CDS complement(1995638..1996093) /locus_tag="Acear_1898" /note="COGs: COG1683 conserved hypothetical protein; InterPro IPR007553; KEGG: aoe:Clos_1835 hypothetical protein; PFAM: protein of unknown function DUF523; SPTR: A8MHU3 Putative uncharacterized protein; PFAM: protein of unknown function (DUF523)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828466.1" /db_xref="GI:302392646" /db_xref="GeneID:9513957" /translation="MLAVSSCLLGCDCKYNGGDNEDKQVLKLTEIKPVIPICPEELGQ LPTPRPPAEIKNGDGHDVLDGRAQVVDKQGRDVTNEFIEGAYQSLQQVRMNGITAVVL KSRSPSCGKGRIYTGDFSGDLKDGDGVTTALFKRNGIKVYNEDEIGKLL" misc_feature complement(1995653..1996093) /locus_tag="Acear_1898" /note="Protein of unknown function (DUF523); Region: DUF523; cl00733" /db_xref="CDD:153961" gene complement(1996114..1996959) /locus_tag="Acear_1899" /db_xref="GeneID:9513958" CDS complement(1996114..1996959) /locus_tag="Acear_1899" /note="COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR000845; KEGG: pth:PTH_0210 purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: A5D5S4 Purine nucleoside phosphorylase; PFAM: phosphorylase superfamily" /codon_start=1 /transl_table=11 /product="purine or other phosphorylase family 1" /protein_id="YP_003828467.1" /db_xref="GI:302392647" /db_xref="GeneID:9513958" /translation="MNDEIPEANFGVIGGSSTYALDFPEDLDGDDIEVVGKGLIFSTP YGDSPEFKLFTVGEKRVLTCKMHGWRKWQEDLSRAEASKQVFWVFMQAGVKRVMAEGG VGAINHLLEPRDIVVPTDYIDQSMRRDVDLNQGYLLMMRQAICPELHQVLYEGAQDNP IGRAFRRSNYVVTDGRHFESPAEVEMYKQAGGDVIGQTLCPEVYLAREIGACYAGVYL VVNYAEGVVKDWSHDELKELFHNEGEVIGNILLEALRKIDIDQDCNCSELRKPTLIKE ENCGE" misc_feature complement(1996189..1996947) /locus_tag="Acear_1899" /note="Phosphorylase superfamily; Region: PNP_UDP_1; cl00303" /db_xref="CDD:193757" gene complement(1997060..1997878) /locus_tag="Acear_1900" /db_xref="GeneID:9513959" CDS complement(1997060..1997878) /locus_tag="Acear_1900" /EC_number="2.5.1.54" /note="COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268:IPR006218:IPR013785; KEGG: hmo:HM1_1923 phospho-2-dehydro-3-deoxyheptonate aldolase, PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: B0TFQ1 phospho-2-dehydro-3-deoxyheptonate aldolase, TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase" /codon_start=1 /transl_table=11 /product="3-deoxy-D-arabinoheptulosonate-7-phosphate synthase" /protein_id="YP_003828468.1" /db_xref="GI:302392648" /db_xref="GeneID:9513959" /translation="MKMLTELDVSDHKEVVEVGDVKIGGEDLAIMAGPCAVESREQLL TAADHVAKEGGQILRGGAFKPRTSPYSFQGLGEEGLEYLAEARERTGLKIVTELLYSD DIELVNSYTDILQIGSRNMQNYGLLKKLGEVDTPVMLKRGYAATIKEWLMAAEYVISH GNDNVILCERGIRTFETATRNTLDLNGIALIKDKLNIPVIIDPSHGTGQRNLVSPMAK AGISAGADGIMVEMHPNPEEALCDGQQSLTLDDFSQLVDELNRVAQAVDKRLAV" misc_feature complement(1997081..1997878) /locus_tag="Acear_1900" /note="NeuB family; Region: NeuB; cl00496" /db_xref="CDD:186036" misc_feature complement(1997123..1997821) /locus_tag="Acear_1900" /note="DAHP synthetase I family; Region: DAHP_synth_1; pfam00793" /db_xref="CDD:189723" gene complement(1998587..1999942) /locus_tag="Acear_1901" /db_xref="GeneID:9513960" CDS complement(1998587..1999942) /locus_tag="Acear_1901" /EC_number="2.6.1.62" /note="COGs: COG0161 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005815:IPR005814:IPR015424:IPR015421; KEGG: bcb:BCB4264_A4230 adenosylmethionine--8-amino-7-oxononanoate transaminase; PFAM: aminotransferase class-III; SPTR: A1HTZ2 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase" /codon_start=1 /transl_table=11 /product="adenosylmethionine-8-amino-7-oxononanoateaminotr ansferase" /protein_id="YP_003828469.1" /db_xref="GI:302392649" /db_xref="GeneID:9513960" /translation="MEDELSLLEKDKEYLWHPFTQMKEWVEDDQLIIERGEGIKLYDT EGNEYYDGVSSIWLNVHGHQKEELDEAVIDQLDRIAHSTMLGLSNKPAIELAEKLVEL TPEGLNKVFYSDSGSTAVEIGLKMAFQYWQQIDHDFGAKDKFITLTNAYHGDTVGSVS VGGVDLFHEIYKPLLFDSLKAPSPYCYRCPFDEEKESCNFSCIKELESMMQEHHHEVA AMVIEPLVQGAGGMIVAPDGYLAKVRELCSEYNILLLADEVAAGFGRTGKMFACEHED VRPDIMTVAKGISGGYLPISATLTTDEIYDAFYDDYETQKTFFHGHSYTGNPLAAAVS VANIELFKEEKIIEKMPPKIKIAADKLAEFRELDHVGDIRQKGLMIGIELIEDKETKE PYDWKEKMGVKVAMKAREKGMIIRPLGNIVVFMPPLCSTEQQLLDMLEIIYESIKEIT S" misc_feature complement(1998590..1999897) /locus_tag="Acear_1901" /note="adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional; Region: PRK06916" /db_xref="CDD:180746" misc_feature complement(1998605..1999897) /locus_tag="Acear_1901" /note="Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase...; Region: OAT_like; cd00610" /db_xref="CDD:99735" misc_feature complement(order(1999085..1999087,1999163..1999168, 1999172..1999174,1999274..1999276,1999481..1999483, 1999487..1999492,1999592..1999600)) /locus_tag="Acear_1901" /note="inhibitor-cofactor binding pocket; inhibition site" /db_xref="CDD:99735" misc_feature complement(order(1999085..1999087,1999163..1999165, 1999172..1999174,1999274..1999276,1999487..1999492, 1999592..1999597)) /locus_tag="Acear_1901" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature complement(1999085..1999087) /locus_tag="Acear_1901" /note="catalytic residue [active]" /db_xref="CDD:99735" gene complement(1999966..2000688) /locus_tag="Acear_1902" /db_xref="GeneID:9513961" CDS complement(1999966..2000688) /locus_tag="Acear_1902" /EC_number="6.3.3.3" /note="COGs: COG0132 Dethiobiotin synthetase; InterPro IPR004472; KEGG: gsu:GSU1583 dethiobiotin synthase; PRIAM: Dethiobiotin synthase; SPTR: Q74CT8 Dethiobiotin synthase; TIGRFAM: dethiobiotin synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase" /codon_start=1 /transl_table=11 /product="dethiobiotin synthase" /protein_id="YP_003828470.1" /db_xref="GI:302392650" /db_xref="GeneID:9513961" /translation="MEAGIFITGTDTGIGKTVVTAGLVAALQQQGYNIGAMKPFQSGA VESNGRLLAPDLEFLLKTTELVADGYDLMNPVRLKPPLAPSVAAEVEGVEVDIDEVES AYNSLQQQYQSLIVEGAGGLMVPLAENFLIPDLIKLFSLPVVVVARPNLGTINHTVLT VKVARQLGLEIIGVIINGLKEEEAGLAEETNPELIEELVDIPVLGIVPYREAIGDDPE EVDLGKLIIENVDLEPVIEYLD" misc_feature complement(2000065..>2000382) /locus_tag="Acear_1902" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" gene complement(2000713..2001693) /locus_tag="Acear_1903" /db_xref="GeneID:9513962" CDS complement(2000713..2001693) /locus_tag="Acear_1903" /EC_number="2.8.1.6" /note="COGs: COG0502 Biotin synthase; InterProIPR002684:IPR007197:IPR010722:IPR013785:IPR 006638; KEGG: chy:CHY_0889 biotin synthase; PFAM: biotin and thiamin synthesis associated; radical SAM domain protein; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Q3ADP5 Biotin synthase; TIGRFAM: biotin synthase; PFAM: radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase" /codon_start=1 /transl_table=11 /product="biotin synthase" /protein_id="YP_003828471.1" /db_xref="GI:302392651" /db_xref="GeneID:9513962" /translation="MEKMDRIKEIYNRVINGEEVTAAEAEELSQLNSEEVWQLIMLAR RITEEFIGDKEVDLCSIVNAKSGSCSEDCKFCAQSAYYDTNVEEYSLLSKAEIISRAQ EMEDKGADHFGIVTSGKEILSEEEFQRILEAVKELTEETGLKICASLGKLSIKRAKLL AEAGLERYHHNLETSANYFPEICSTHDYSERVTTVKNVKAAGLEVCCGGIIGLGESFR DRIELAFKLKNLDVDSVPINILNPVEGTPLEYSDSLPPLEILQTTAIFRFILPDKMIR YAGGREDNLRSLQPLGLVAGVNGLLVDQYLTTEGQGVEKDIQMVKDLGLM" misc_feature complement(2000719..2001684) /locus_tag="Acear_1903" /note="biotin synthase; Validated; Region: PRK06256" /db_xref="CDD:180492" misc_feature complement(2000899..2001498) /locus_tag="Acear_1903" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(2000974..2000979,2001064..2001066, 2001181..2001183,2001250..2001258,2001334..2001339, 2001343..2001345,2001463..2001471,2001475..2001477, 2001481..2001483,2001487..2001489)) /locus_tag="Acear_1903" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" misc_feature complement(2000719..2000988) /locus_tag="Acear_1903" /note="Biotin and Thiamin Synthesis associated domain; Region: BATS; cl06149" /db_xref="CDD:157061" gene complement(2002533..2003651) /locus_tag="Acear_1904" /db_xref="GeneID:9513963" CDS complement(2002533..2003651) /locus_tag="Acear_1904" /note="COGs: COG1600 Uncharacterized Fe-S protein; InterProIPR004453:IPR017900:IPR017896:IPR013542:IPR 001450:IPR004155:IPR009051:IPR016024:IPR011989; KEGG: gwc:GWCH70_0503 iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PBS lyase HEAT domain protein repeat-containing protein; SPTR: C5D5W5 Iron-sulfur cluster binding protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster binding protein" /protein_id="YP_003828472.1" /db_xref="GI:302392652" /db_xref="GeneID:9513963" /translation="MNLTTKIKEQGKKIGLDEVKITAAEPFPAVKDFLFKMKEEDKLS KFVKGDLDLITDPKQVLSTARSIIVTAISYQVDINQKPNLKEELRGKLSRFTWGEDYH NVLGKKLDQLIDFLNQQVPAVKTKKFVDTGPTVDRALARRAGIGWQGKNCSIIHPEYG SWIFIGGIITDLELKLDLPLENKCGDCQKCIEACPTGALEEPYLLNSSKCLGYVTLSR GYLKEEERQTMGTRLWGCDTCQEVCPYNQEAESGNHSEFQPQTIEVYPQLPDLLTLTD REYQEKFGPTAMNWRGKRPIQRNAAVIMGNLKNPKAIPYLIEGLKDSKPIVRAHSAWA LGEIGVANVVADLEQALQIEQTKQVTEELRSAIQKLSS" misc_feature complement(2002641..2003645) /locus_tag="Acear_1904" /note="Uncharacterized Fe-S protein [Energy production and conversion]; Region: COG1600" /db_xref="CDD:31788" misc_feature complement(2003259..2003489) /locus_tag="Acear_1904" /note="Domain of unknown function (DUF1730); Region: DUF1730; pfam08331" /db_xref="CDD:149403" gene 2003833..2005041 /locus_tag="Acear_1905" /db_xref="GeneID:9513964" CDS 2003833..2005041 /locus_tag="Acear_1905" /note="COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680:IPR011059; KEGG: mta:Moth_0462 amidohydrolase; PFAM: amidohydrolase; SPTR: Q2RL96 Amidohydrolase; PFAM: Amidohydrolase family" /codon_start=1 /transl_table=11 /product="amidohydrolase" /protein_id="YP_003828473.1" /db_xref="GI:302392653" /db_xref="GeneID:9513964" /translation="MTIKKITDNQQAIILAGSIIDGTGAKPKTRQAIIIDNQKIKKII PEQQLTDSTELQNYEKIDLNDYTILPGLIDSHVHLALDGIDFKKVTDEWNSISKTKER VNKELKNTLKNGVVAVRDGGDRAQISFIAKQMVEEKEALGPDIVTTNYALSKKEYYGS FLGPGIESKDEIKAEVTKLHQSNIDQLKVLASGIVSFSEYGKVGAVQFSIDELKHIVN LAHEYDLQVMAHASSEEAVQTCIQAGVDTLEHGYFLSEDSLKELAAKEIPWIPTVVPV ANQPNDKDLYSEKELVIIKQTYELQLKMIDKAQDLGVKLGIGTDAGAYQVRHGLSYFR ELELFNQTSLSPLEIIKIATKNNSEIIELDHKLGSIEPNKKPELIGVKGDPLKDLSLL DNPEIIIHAA" misc_feature 2004004..2005008 /locus_tag="Acear_1905" /note="Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the...; Region: Met_dep_hydrolase_A; cd01299" /db_xref="CDD:30042" misc_feature order(2004058..2004060,2004064..2004066,2004520..2004522, 2004580..2004582,2004790..2004792) /locus_tag="Acear_1905" /note="active site" /db_xref="CDD:30042" gene 2005743..2006513 /locus_tag="Acear_1906" /db_xref="GeneID:9513965" CDS 2005743..2006513 /locus_tag="Acear_1906" /note="COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: kra:Krad_3138 cobyrinic acid ac-diamide synthase; PFAM: cobyrinic acid ac-diamide synthase; SPTR: C6R1Y9 SpoOJ regulator protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain" /codon_start=1 /transl_table=11 /product="cobyrinic acid ac-diamide synthase" /protein_id="YP_003828474.1" /db_xref="GI:302392654" /db_xref="GeneID:9513965" /translation="MGQVLVIANQKGGVGKTTTTLNLGAILNELNKEILLVDLDPQGG LTFHCGYEPEELESTIYDALKDEEMTDEIILETGFGPELLPANVDLAVSEMELMNTVA RERRLTAVLNPLRDKYDLIIIDGQPSLGLLTLNAMTAANQVIIPISCEYLALRGVNGL MKMIKKVQGQLNSSLKINGVLPTMFDRRTNHTEWALKQIRDRFEPEIKVYNHIIYRSI RFAEAAEAQEPIIHYAKNIPGADGYRNLARELIKNGTV" misc_feature 2005743..2006501 /locus_tag="Acear_1906" /note="ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]; Region: Soj; COG1192" /db_xref="CDD:31385" misc_feature 2005752..>2005868 /locus_tag="Acear_1906" /note="ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following...; Region: ParA; cd02042" /db_xref="CDD:73302" misc_feature 2005773..2005793 /locus_tag="Acear_1906" /note="P-loop; other site" /db_xref="CDD:73302" misc_feature 2005791..2005793 /locus_tag="Acear_1906" /note="Magnesium ion binding site [ion binding]; other site" /db_xref="CDD:73302" misc_feature <2006094..2006291 /locus_tag="Acear_1906" /note="ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following...; Region: ParA; cd02042" /db_xref="CDD:73302" misc_feature 2006112..2006114 /locus_tag="Acear_1906" /note="Magnesium ion binding site [ion binding]; other site" /db_xref="CDD:73302" gene complement(2006541..2006759) /locus_tag="Acear_1907" /db_xref="GeneID:9513966" CDS complement(2006541..2006759) /locus_tag="Acear_1907" /note="InterPro IPR013429; KEGG: dae:Dtox_1074 regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; SPTR: C1T991 Putative regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: regulatory protein, FmdB family" /codon_start=1 /transl_table=11 /product="regulatory protein, FmdB family" /protein_id="YP_003828475.1" /db_xref="GI:302392655" /db_xref="GeneID:9513966" /translation="MPIYEFKCKDCGHEFEALCGSSDEKPDCCPECKGEDLKKLLSTF SAKGPTISSSDNDSECGSCSSTSCDTCD" misc_feature complement(2006634..2006759) /locus_tag="Acear_1907" /note="Zinc ribbon domain; Region: CxxC_CxxC_SSSS; cl00993" /db_xref="CDD:197419" gene 2007018..2007245 /locus_tag="Acear_1908" /db_xref="GeneID:9513967" CDS 2007018..2007245 /locus_tag="Acear_1908" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828476.1" /db_xref="GI:302392656" /db_xref="GeneID:9513967" /translation="MLTKIFNKLSSIKIKLMSLILIILLIALNIGIGCFTFFVLTDIK EHIYQEKKKQGELLDIEIPSFMVACFYGSYP" gene complement(2007325..2008626) /locus_tag="Acear_1909" /db_xref="GeneID:9513968" CDS complement(2007325..2008626) /locus_tag="Acear_1909" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: tex:Teth514_2350 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003828477.1" /db_xref="GI:302392657" /db_xref="GeneID:9513968" /translation="MKLAKYFIHKTNQTQQIVLGCLAYASARLYNIGNYQRKNWSKDS AKDYPDWYKQKKQLKTNFWYKNLPSQTAQETLKILSDNWDSFYQSMEDYQDNSDKYNG EPNPPNYKPKDSKFNFRYLNNGFKIIDGKLRLSIPKQLKKYLKEEYSITNKFLWIRVP NELLSSNRDVLNSTTRIEFKPLSDDTYKVILTYKVDTPTIKEDNGNYLSIDLGINNLM TCYSNQNQESFIIDGGQYLAINRYFDKKIKHYQSILNGQGKKTSKRIQQLYKKRRKQL FHLIHSATKKVVDYCIKHNISRVIVGDIKNIRDDANLGKQNNQKLHKLPFDIIYHQLE YKLNLQGITLIKKSEKYTSQCSPYSKKVTKKYADKSNRIKRGLYVDKNNNQAFNADSV GSFNILRKYLQQRRKGKDITLQVKGLSNPVKYSWNDYQFVV" misc_feature complement(2007703..2008440) /locus_tag="Acear_1909" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature complement(2007568..2007813) /locus_tag="Acear_1909" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature complement(2007427..2007651) /locus_tag="Acear_1909" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 2008866..2009642 /locus_tag="Acear_1910" /db_xref="GeneID:9513969" CDS 2008866..2009642 /locus_tag="Acear_1910" /note="COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR005467:IPR003661:IPR003594:IPR009082:IPR 004358; KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: A0Q276 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="YP_003828478.1" /db_xref="GI:302392658" /db_xref="GeneID:9513969" /translation="MGSLLFVLKTPLNLIFSALQMLNSAQKNKSKEGNEKIERYTNII EQNSQRLLRLVNNIVDITKIEAGSFTLNLQNYDIVKLIKSITYSVREYIEHKNKILEF NTDSEHKVIACDAVNIERIMLNLLSNAVKFTDEGDKITVSLDDKEDSILISIKDTGIG IEEEKQEIIFQQFGQANKSFDRNNEGSGIGLSIVKSLVELHDGEIRLNSEYSAGSEFI IELPAKKISEKDNSTANSNKHQTQNLTNKINIEFSDIYEL" misc_feature 2008887..2009066 /locus_tag="Acear_1910" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cl00080" /db_xref="CDD:153499" misc_feature 2009217..2009528 /locus_tag="Acear_1910" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature order(2009235..2009237,2009247..2009249,2009256..2009258, 2009325..2009327,2009331..2009333,2009337..2009339, 2009343..2009348,2009427..2009438,2009484..2009486, 2009490..2009492,2009505..2009510,2009514..2009516) /locus_tag="Acear_1910" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature 2009247..2009249 /locus_tag="Acear_1910" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature order(2009337..2009339,2009343..2009345,2009427..2009429, 2009433..2009435) /locus_tag="Acear_1910" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene 2009966..2010640 /locus_tag="Acear_1911" /db_xref="GeneID:9513970" CDS 2009966..2010640 /locus_tag="Acear_1911" /EC_number="1.11.1.15" /note="COGs: COG0450 peroxiredoxin; Contains selenocysteine; InterProIPR017936:IPR000866:IPR019479:IPR012336:IPR 012335; KEGG: tte:TTE2186 peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; peroxiredoxin-like; PRIAM: peroxiredoxin; SPTR: B7R8N9 Antioxidant, AhpC/TSA family; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family" /codon_start=1 /transl_except=(pos:2010131..2010133,aa:Sec) /transl_table=11 /product="peroxiredoxin" /protein_id="YP_003828479.1" /db_xref="GI:302392659" /db_xref="GeneID:9513970" /translation="MANQQQNDTPRACLPQIGAEAPGFTAMTTFGERSLSDYRGNWLV FFAHPGDFTPVUTTEFIAFAEAYDKFQERGAELLGLSIGSIPSHLAWVYDIYEETGVE IPFPIIADVNQQIAKLYGMISEEASTTTTVRPVFIIDPQGIVRLILYYPLEVGRSIPE ILRTLDALQTADRKNAATPANWQPGDPLVLPVPKTYQELLDRVENRPGYDCIDWYLCY MDYNNR" misc_feature 2009984..2010631 /locus_tag="Acear_1911" /note="peroxiredoxin; Provisional; Region: PRK13189" /db_xref="CDD:183884" misc_feature 2010014..2010619 /locus_tag="Acear_1911" /note="Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by...; Region: PRX_1cys; cd03016" /db_xref="CDD:48565" misc_feature order(2010014..2010016,2010125..2010127,2010134..2010142, 2010149..2010151,2010245..2010247,2010254..2010256, 2010323..2010325,2010356..2010358,2010398..2010406, 2010410..2010418,2010422..2010439,2010443..2010445, 2010452..2010454,2010464..2010469,2010494..2010499, 2010503..2010508,2010608..2010610,2010617..2010619) /locus_tag="Acear_1911" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:48565" misc_feature order(2010050..2010052,2010209..2010217,2010221..2010226, 2010230..2010235,2010239..2010244,2010269..2010271, 2010296..2010301,2010329..2010331,2010350..2010355, 2010542..2010544,2010602..2010604) /locus_tag="Acear_1911" /note="decamer (pentamer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:48565" misc_feature order(2010122..2010124,2010131..2010133,2010362..2010364) /locus_tag="Acear_1911" /note="catalytic triad [active]" /db_xref="CDD:48565" gene complement(2011357..2012367) /locus_tag="Acear_1912" /pseudo /db_xref="GeneID:9513971" gene 2012516..2013719 /locus_tag="Acear_1913" /pseudo /db_xref="GeneID:9513972" gene complement(2013768..2015183) /locus_tag="Acear_1914" /db_xref="GeneID:9513973" CDS complement(2013768..2015183) /locus_tag="Acear_1914" /note="COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003660:IPR003661:IPR003594:IPR 009082:IPR004358; KEGG: cbl:CLK_2842 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: B1KSE3 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain" /codon_start=1 /transl_table=11 /product="integral membrane sensor signal transduction histidine kinase" /protein_id="YP_003828480.1" /db_xref="GI:302392660" /db_xref="GeneID:9513973" /translation="MLSKLNKLWERMNIPIYLKLTLIYAFIFSLMIVISSTATFKIMK YLGWQNFKEEVRDTSREIANYIKAGKALDKSLLQEIDLRGPVDFRIYNRAGDLVLSND WHVLHSKKGQHRLEINMKSNLGSISVWRDSSGEKKALYLNRKIEYNNQLFYLQVDFPL RGRDSIFNTLLLILSITSIIGILSSIVVGNYIAKKMLRPIGEITATAQKITINDLDKR IDTSGADDELKKLALTFNNMIDRLQASIEKQKQFVSDASHELRTPISVIQGYIDLLDR WGKEDKEVLEEAIEAIQAETTSMKKLLEQLLFLARSDKGQYKFEHKTFDLSELIAEVY QEFELIDDEHEITLAQNDQVEIRGDAKAIKQMLRIIIDNSIKYTESGGRITITSQQRR EEEQVRIVIKDTGRGIGKEELDRIFDRFYRVDESRTSKTGGAGLGLSIAKWIVESQQG RIEANSELNKGTEIIITLPTC" misc_feature complement(2014452..2014598) /locus_tag="Acear_1914" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cd06225" /db_xref="CDD:100122" misc_feature complement(order(2014458..2014463,2014470..2014475, 2014479..2014484,2014491..2014496,2014500..2014505, 2014554..2014556,2014560..2014565,2014572..2014577, 2014581..2014586,2014593..2014598)) /locus_tag="Acear_1914" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:100122" misc_feature complement(2014251..2014448) /locus_tag="Acear_1914" /note="Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-...; Region: HisKA; cd00082" /db_xref="CDD:119399" misc_feature complement(order(2014266..2014268,2014278..2014280, 2014287..2014289,2014299..2014301,2014308..2014310, 2014320..2014322,2014374..2014376,2014383..2014385, 2014395..2014397,2014404..2014406,2014416..2014418, 2014428..2014430)) /locus_tag="Acear_1914" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119399" misc_feature complement(2014410..2014412) /locus_tag="Acear_1914" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:119399" misc_feature complement(2013780..2014097) /locus_tag="Acear_1914" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cd00075" /db_xref="CDD:28956" misc_feature complement(order(2013792..2013794,2013798..2013803, 2013816..2013818,2013822..2013824,2013870..2013881, 2013960..2013965,2013969..2013971,2013975..2013977, 2013981..2013983,2014056..2014058,2014065..2014067, 2014077..2014079)) /locus_tag="Acear_1914" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28956" misc_feature complement(2014065..2014067) /locus_tag="Acear_1914" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28956" misc_feature complement(order(2013873..2013875,2013879..2013881, 2013963..2013965,2013969..2013971)) /locus_tag="Acear_1914" /note="G-X-G motif; other site" /db_xref="CDD:28956" gene complement(2015164..2015847) /locus_tag="Acear_1915" /db_xref="GeneID:9513974" CDS complement(2015164..2015847) /locus_tag="Acear_1915" /note="COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR005829:IPR001789:IPR001867:IPR011006; KEGG: aoe:Clos_0943 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C5RIG3 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, winged helix family" /protein_id="YP_003828481.1" /db_xref="GI:302392661" /db_xref="GeneID:9513974" /translation="MGDYQVLIIEDEEKIARFLELELEHEGYEVEAVYNGEEGLEAII EGDFDLVLLDIMLPGLSGMEICRRVRKESEIPIIMLTAKDDTTDKVMGLDLGAHDYIT KPFAIEELLARMRGVLRRNKRDAGMDSILRVKNLVLNQETREVRVNDEVVELTKKEYN LLLYLLKNKGIVLSREQIIEDVWGYDYPGDTNIVDVYIRYLRSKIDDECKETYIETVR GVGYVIKAE" misc_feature complement(2015167..2015838) /locus_tag="Acear_1915" /note="Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]; Region: OmpR; COG0745" /db_xref="CDD:31088" misc_feature complement(2015494..2015829) /locus_tag="Acear_1915" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(2015536..2015541,2015548..2015550, 2015605..2015607,2015662..2015664,2015686..2015688, 2015815..2015820)) /locus_tag="Acear_1915" /note="active site" /db_xref="CDD:29071" misc_feature complement(2015686..2015688) /locus_tag="Acear_1915" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(2015662..2015670,2015674..2015679)) /locus_tag="Acear_1915" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(2015533..2015541) /locus_tag="Acear_1915" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(2015176..2015457) /locus_tag="Acear_1915" /note="Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase...; Region: trans_reg_C; cd00383" /db_xref="CDD:29475" misc_feature complement(order(2015185..2015187,2015200..2015202, 2015233..2015238,2015260..2015262,2015269..2015271, 2015323..2015328,2015383..2015385)) /locus_tag="Acear_1915" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:29475" gene complement(2016033..2017247) /locus_tag="Acear_1916" /db_xref="GeneID:9513975" CDS complement(2016033..2017247) /locus_tag="Acear_1916" /note="COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: bbe:BBR47_15080 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: A1HTE5 Putative uncharacterized protein; PFAM: Predicted permease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828482.1" /db_xref="GI:302392662" /db_xref="GeneID:9513975" /translation="MIFEVFTIALKSLQANKLRTFLSMLGIIIGVGAVIAIVSIGTGA QKQVTSNISSLGSNLIEISQGFSRGRGGSVSSQSTDVFTLEMADAIEASCPDVKQVIP SAQSQGLLIKGENNLQASLIGTEAAYQEINDYYPKQGKFIDQVDIETAGNIIILGSEL VEELFPAANPLGERVNFNYQNHTFLFTVVGVMEEKSTGGPLGDLNDQAYIPITTYLNK LANTNYVSGFKAQAESSQVASKAVSQIEYFLTQRIGNQDEFRIMSQDQILDTITGVTK SLSLMLGGIAAISLVVGGIGIMNIMLVSVTERTREIGIRKALGAKKRDILAQFMIESL SLSGTGGVLGIGLGYGGGYIISKVGGWPFVISPLSVVIAFSFSLLIGLFFGIYPALKA AKLEPVDALSYE" misc_feature complement(2016036..2017199) /locus_tag="Acear_1916" /note="ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]; Region: SalY; COG0577" /db_xref="CDD:30922" misc_feature complement(2016435..2017106) /locus_tag="Acear_1916" /note="MacB-like periplasmic core domain; Region: MacB_PCD; pfam12704" /db_xref="CDD:193180" misc_feature complement(<2016252..2016395) /locus_tag="Acear_1916" /note="FtsX-like permease family; Region: FtsX; pfam02687" /db_xref="CDD:190390" gene complement(2017244..2017924) /locus_tag="Acear_1917" /db_xref="GeneID:9513976" CDS complement(2017244..2017924) /locus_tag="Acear_1917" /note="COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: tpd:Teth39_2014 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1ZUH1 ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003828483.1" /db_xref="GI:302392663" /db_xref="GeneID:9513976" /translation="MLEVKDLTKVFRSGEEVAVRALDSVSFRVEAGEMVAIMGPSGSG KSTLMHLIGCLDQPTEGKYFLDGEDVSLAGDNQLAEIRNQQVGFIFQQFNLLAKMSVL YNVEVPLIYAGVSRKQRRQRARDLLEEVGLGHRLDHYPTEISGGQKQRVAIARALANN PSLILADEPTGNLDSETEAEIMDIFHNLNEEGHTIILVTHSEKIGRHAQRILHLLDGR LIEDEVVV" misc_feature complement(2017253..2017924) /locus_tag="Acear_1917" /note="ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]; Region: SalX; COG1136" /db_xref="CDD:31331" misc_feature complement(2017268..2017921) /locus_tag="Acear_1917" /note="This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together...; Region: ABC_MJ0796_Lo1CDE_FtsE; cd03255" /db_xref="CDD:73014" misc_feature complement(2017787..2017810) /locus_tag="Acear_1917" /note="Walker A/P-loop; other site" /db_xref="CDD:73014" misc_feature complement(order(2017325..2017327,2017421..2017426, 2017652..2017654,2017784..2017792,2017796..2017801)) /locus_tag="Acear_1917" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73014" misc_feature complement(2017652..2017663) /locus_tag="Acear_1917" /note="Q-loop/lid; other site" /db_xref="CDD:73014" misc_feature complement(2017469..2017498) /locus_tag="Acear_1917" /note="ABC transporter signature motif; other site" /db_xref="CDD:73014" misc_feature complement(2017421..2017438) /locus_tag="Acear_1917" /note="Walker B; other site" /db_xref="CDD:73014" misc_feature complement(2017403..2017414) /locus_tag="Acear_1917" /note="D-loop; other site" /db_xref="CDD:73014" misc_feature complement(2017319..2017339) /locus_tag="Acear_1917" /note="H-loop/switch region; other site" /db_xref="CDD:73014" gene complement(2017924..2018982) /locus_tag="Acear_1918" /db_xref="GeneID:9513977" CDS complement(2017924..2018982) /locus_tag="Acear_1918" /note="COGs: COG0845 Membrane-fusion protein; InterPro IPR006143:IPR000089; KEGG: pmo:Pmob_0815 RND family efflux transporter MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: A9BHD0 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit" /codon_start=1 /transl_table=11 /product="efflux transporter, RND family, MFP subunit" /protein_id="YP_003828484.1" /db_xref="GI:302392664" /db_xref="GeneID:9513977" /translation="MKKWISIGLAVVLIIGGGIVGWNKFFRQQSASSSNLTQQIRPKM VMTLKKGNLVKSIIASGVVESIESQELYFKTNGTIKSINIAEGAKVSEGQVLMELDND KQRLEYYKAKNEYERAVINGTQSEVEEAKLNLKIAEDKLEETKLKAPFSGIVNEIGVE EDSYTELDQGKIVAKIIDDSSYQVEVNVDESDSRQLSLGQPARITLEALPGREFAGKV VDIGANAESESGIVTLPVTVSITEKPNFIKPGFSADVEIIVNKIEDRLVVPITAIFSK QGTTKAVQIIDGRPTVVDVETGITNGKQVVVEEGLKSGDKILINTYQFANSGTKDGTE QSKGGMIPGGRMMRGGGR" misc_feature complement(2017993..2018850) /locus_tag="Acear_1918" /note="RND family efflux transporter, MFP subunit; Region: RND_mfp; TIGR01730" /db_xref="CDD:162505" gene complement(2018997..2020409) /locus_tag="Acear_1919" /db_xref="GeneID:9513978" CDS complement(2018997..2020409) /locus_tag="Acear_1919" /note="COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: hypothetical protein; PFAM: outer membrane efflux protein; SPTR: A1HRF7 Outer membrane efflux protein; PFAM: Outer membrane efflux protein" /codon_start=1 /transl_table=11 /product="outer membrane efflux protein" /protein_id="YP_003828485.1" /db_xref="GI:302392665" /db_xref="GeneID:9513978" /translation="MLYPRNKLLVLVISLFLVTASATTVLAKEITFKEAVKQGLKNNL ELVKSRSNLHQLQRELKIIKAGSDWQVDADTEINNSGDNFLANGESEDELDELELTLT GSKTYWSGLVLETDLDYQQADLLEKAAQDSLEFDFSAVQDIYPQVPTAAEQDYIQQKL EIEKAETRLAEEQNNKVINWTADYLELLRLQKSYQLAQKNHQVAEQELAEAVAQQEIG EAGKIELLRAQAELKEREYNLKTAENDYQQARQALADELGLSDGDKLVLANKTNYLTE LKEIAASFPIDLTNKTALINLAVDNSVELTAKKLDIRSAEHKLEWKKLEDKPEIDLKG SYDSAAEEWQAGVVVTYNLFDSGRQELEVENLREEAATFKREEEQLIKDIKLEVADLS SRIPAKQADLEGAEFSLAKAELEKAVAKKQLEQGLIDQLEFRAEALALQEAKINLQAA EDELLITKLELIEYVSQISL" misc_feature complement(2019636..>2019941) /locus_tag="Acear_1919" /note="Outer membrane efflux protein; Region: OEP; pfam02321" /db_xref="CDD:190278" misc_feature complement(2019015..2019530) /locus_tag="Acear_1919" /note="Outer membrane efflux protein; Region: OEP; pfam02321" /db_xref="CDD:190278" gene complement(2020390..2021475) /locus_tag="Acear_1920" /db_xref="GeneID:9513979" CDS complement(2020390..2021475) /locus_tag="Acear_1920" /note="KEGG: tna:CTN_0283 outer membrane protein-like protein precursor; SPTR: B9KBR3 Outer membrane protein-like protein; PFAM: Outer membrane efflux protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828486.1" /db_xref="GI:302392666" /db_xref="GeneID:9513979" /translation="MRRKRKGLIIVIICLTLLVLISNLVLAGSGEKLNVIETINLVLK ENHELQIAKLELANAEIEYQKSQANNLTAQSRAAELEAKANLLQAQNQYYETQADLIK EGLTKYGAVRLAKQNIAVKQTEKRLEKLRLDKIKTQLKQGHKNNLDLIEQMNEYQDVE VNFNQAEDTYQQALRELKFIINYNEEKNLELQPLTAVELWQITEQEVLQCGLESSLEL KLAAERIAAAKQKLTKLKQIATPKLELKTAENELQIAKLDKNSIKREVKTALYSNYDD FKHMIKQLNLRAENLSEVRENQKRIAQQQKKGLASREELLAVEVQLLQAKYDYQSAVV DYYSWQLELKVAMQEEVEGLLDALPEK" misc_feature complement(2020930..>2021235) /locus_tag="Acear_1920" /note="Outer membrane efflux protein; Region: OEP; pfam02321" /db_xref="CDD:190278" gene 2021658..2022092 /locus_tag="Acear_1921" /db_xref="GeneID:9513980" CDS 2021658..2022092 /locus_tag="Acear_1921" /note="COGs: COG1846 transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: dhd:Dhaf_0023 transcriptional regulator, TrmB; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: B1B7Z7 transcriptional regulator, MarR family; PFAM: MarR family" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_003828487.1" /db_xref="GI:302392667" /db_xref="GeneID:9513980" /translation="MTQEHIGKYLSIARRAHSSLLDQKLKPYDISHGQVLLLIALYRN DGICQQTISEIYNLNKAAVGRGIKKLKSIGFITKETDPEDRRRQLIYLTAKAKEFQPK LKEILSSVEAEMKQDLTKKEVETFFKVIKKICNNLDVEINNK" misc_feature 2021691..2022053 /locus_tag="Acear_1921" /note="Transcriptional regulators [Transcription]; Region: MarR; COG1846" /db_xref="CDD:32031" misc_feature 2021730..2022026 /locus_tag="Acear_1921" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" gene 2022137..2023510 /locus_tag="Acear_1922" /db_xref="GeneID:9513981" CDS 2022137..2023510 /locus_tag="Acear_1922" /note="COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: nth:Nther_2612 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: B2A1X1 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: efflux protein, MATE family" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /protein_id="YP_003828488.1" /db_xref="GI:302392668" /db_xref="GeneID:9513981" /translation="MELTEKADRLGTEAIIPLLIKLSIPSIIGMGVQALYNIVDSIYV GRLSTEALSALSLAFPIQLILVALGVGTGVGTSSLISRLLGKSEGARANNAAEHVILI SLGYGLIIGLIGFFFADDLIHLFTTDTLLIDLGQRYIRIIMVGSLAIFIPMIFNNILR GEGNTFLPMLTMLIGAGLNIILDPFLIFGIGIFPQLGVDGAAYATVFSRLVSGIFITA VLFSDQNQIQLRFSEFKFDFQIIKEIYQVGFPAMIMRLLASIMVLGMNKIVGNYSTTA IAVVGIFFRLQTFVLLPVFGFNQGFLPIVGYNYGHNNPKRMKKTITYGMLSAFCFTLL GFLIFRLFPGYLIKLFNQDPKLISMGTTALKKISFAYLLAGINIVGSATFQALGDGLP SLCISFLRQIILILPLMYLLGEFYGLNTVWFAIPIAEVFSFLLLTVWLMSTLKKAFSN MKEQNFV" misc_feature 2022221..2023501 /locus_tag="Acear_1922" /note="Na+-driven multidrug efflux pump [Defense mechanisms]; Region: NorM; COG0534" /db_xref="CDD:30880" misc_feature <2022479..2022688 /locus_tag="Acear_1922" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" misc_feature 2022884..2023345 /locus_tag="Acear_1922" /note="MatE; Region: MatE; pfam01554" /db_xref="CDD:190033" gene complement(2023772..2025454) /locus_tag="Acear_1923" /db_xref="GeneID:9513982" CDS complement(2023772..2025454) /locus_tag="Acear_1923" /EC_number="4.2.1.9" /note="COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR004404:IPR020558:IPR000581; KEGG: cth:Cthe_2713 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: C5EPY2 Dihydroxyacid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase" /codon_start=1 /transl_table=11 /product="dihydroxyacid dehydratase" /protein_id="YP_003828489.1" /db_xref="GI:302392669" /db_xref="GeneID:9513982" /translation="MKTRSSSILERPEWSMNRSLYKSMGFTDDDLSKPLIGIANSWNE ICPGNFNLKQVADSVRRGVTAAGGTPLEFGVIGACDGIAQGNDGMRFILPTRDQIAND IELMIEAHQLDAVVLLASCDKIVPGMLMAAARLDLPTILVNGGTMLPGAVDIPLEPYE EHVDAAAVQESYSLLKDEKIDMDKSLELENNACPTYGSCAYMGTANTMCCLAEALGMS LPGSAMVPAPYSKRMHIAYKTGKQIMELVEKDITAKEIINNKSIENATRVSLAIGGST NIALHLPAIAYEAEVEFDINKLDELSKSTPHIASIMPASKYDVVDLYEAGGVPAVMKE LSTLLNEDALTVTSKTVEENIKLAETRRREVIKTTDAPVHEEGGVAVLEGNLAPEGGI TKPAAIKDEMFEFTGEARVFNSEQEAIDAILDNEISAGQVVVIRYEGPKGGPGMPEMF KPMKLLMGKGLAESVALVTDGRFSGTNNGCFVGHISPEAAEGGPLAAVKDGDVITIDI PEREISLEVDEEVIEDRLKEWERPGLSRKRGYLSLYAKLASSASDGAILKLE" misc_feature complement(2023775..2025445) /locus_tag="Acear_1923" /note="Dehydratase family; Region: ILVD_EDD; cl00340" /db_xref="CDD:185921" misc_feature complement(2023781..2025382) /locus_tag="Acear_1923" /note="dihydroxy-acid dehydratase; Region: ilvD; TIGR00110" /db_xref="CDD:161713" gene complement(2025491..2026342) /locus_tag="Acear_1924" /db_xref="GeneID:9513983" CDS complement(2025491..2026342) /locus_tag="Acear_1924" /EC_number="2.1.2.11" /note="COGs: COG0413 Ketopantoate hydroxymethyltransferase; InterPro IPR003700:IPR015813; KEGG: amt:Amet_1189 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: C1TQY2 Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase" /codon_start=1 /transl_table=11 /product="ketopantoate hydroxymethyltransferase" /protein_id="YP_003828490.1" /db_xref="GI:302392670" /db_xref="GeneID:9513983" /translation="MAKKKSILDFMEMKENGEKVAWVTAYDYPMASFAEQAGMDMILV GDSLGMVVLGYDGTVPVTMEDCISHCQAVRRGAPNTFCIGDLPFMSYQTSPKEAVANA GRFLKEADMDAVKLEGGRRVTDQIEAITDAGIVVCGHIGLTPQSSGQLGGFKAQGLTV DSARELIKDAVAVQEAGAKMLLVEAVPPEVTEFITEKLDIPVYSIGAGLPCDGQLLIC GDMLGMFQAFTPKFVKQYASIAEDAVAGFEEYVKEVKNEEFPKDEHVYHIQESQAKFD KLFKEFE" misc_feature complement(2025563..2026324) /locus_tag="Acear_1924" /note="Ketopantoate hydroxymethyltransferase (KPHMT) is the first enzyme in the pantothenate biosynthesis pathway. Ketopantoate hydroxymethyltransferase (KPHMT) catalyzes the first committed step in the biosynthesis of pantothenate (vitamin B5), which is a...; Region: KPHMT-like; cd06557" /db_xref="CDD:119342" misc_feature complement(order(2025611..2025625,2025632..2025634, 2025674..2025679,2025686..2025688,2025806..2025808, 2025890..2025901,2025905..2025910,2025938..2025955, 2026007..2026009,2026022..2026027,2026034..2026036, 2026046..2026048,2026076..2026081,2026118..2026120, 2026127..2026129,2026136..2026141,2026148..2026150, 2026163..2026168,2026178..2026195,2026199..2026201, 2026244..2026246,2026253..2026264,2026319..2026324)) /locus_tag="Acear_1924" /note="oligomerization interface [polypeptide binding]; other site" /db_xref="CDD:119342" misc_feature complement(order(2025692..2025694,2025698..2025700, 2025791..2025793,2025911..2025913,2025926..2025928, 2025998..2026000,2026088..2026090,2026202..2026210, 2026214..2026216,2026271..2026273)) /locus_tag="Acear_1924" /note="active site" /db_xref="CDD:119342" misc_feature complement(order(2025998..2026000,2026088..2026090, 2026205..2026207)) /locus_tag="Acear_1924" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:119342" gene complement(2026457..2027812) /locus_tag="Acear_1925" /db_xref="GeneID:9513984" CDS complement(2026457..2027812) /locus_tag="Acear_1925" /note="COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: dfe:Dfer_1410 gluconate transporter; PFAM: gluconate transporter; SPTR: A6C503 gluconate permease gntP; PFAM: GntP family permease; TIGRFAM: gluconate transporter" /codon_start=1 /transl_table=11 /product="gluconate transporter" /protein_id="YP_003828491.1" /db_xref="GI:302392671" /db_xref="GeneID:9513984" /translation="MLLPLLAFVIGVFAIVFFVIRLKLPAFIGLTLSAFIVGIVTPEI PFAEVPAQIATIFGNTMTGIGIPILMASVVGKSLMDSGAAIRIVRGFLNVTGEEKSEL SLLGSSYLLSIPVFFDNVFYLLAPLARAMKARTKIKYPLYIACISAGALVTHTLVPPT PGPLAMASNIGVDVGMVMIVGIIVAIPCSVVGGLVYGRWIDKRLDIPLRETMGSTKES LEQVANKPLEELPGLGVSLLPIILPVIFVGSDTITKAIGVSESVGGLTSFIGNPTFAL TIAALIAASILAMQKGFSTEELAESLERSLESGGIIVAITAAGGAFGGILKAAGVGQA IAGGLSELGIPLIVSAWLITGLIKIAQGSTTVALLTTSSIMAPFASQLSCHPVYLITA IGTGGMMFSWFNDSGFWIINKVAGLNESETFKVWSFLNPVMSITGIIMTLIMSRLFPL I" misc_feature complement(2026478..2027752) /locus_tag="Acear_1925" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature complement(2026478..2027752) /locus_tag="Acear_1925" /note="gluconate transporter; Region: gntP; TIGR00791" /db_xref="CDD:129873" gene complement(2028199..2028864) /locus_tag="Acear_1926" /db_xref="GeneID:9513985" CDS complement(2028199..2028864) /locus_tag="Acear_1926" /note="COGs: COG1802 transcriptional regulators; InterPro IPR000524:IPR011711:IPR011991; KEGG: tro:trd_A0077 transcriptional regulator, GntR family; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: B9L5F0 transcriptional Regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_003828492.1" /db_xref="GI:302392672" /db_xref="GeneID:9513985" /translation="MKRVLEHETKGEKVKHYLLDCILNKSEYKPGDKIIETQIAKELN ISQAPVRDAIKDLKMMGFVESEPYKGSYIKQMSDKELKEVYEIRVALERIAVKQAIQY ITEEELNEMESIVAEMTNCIENEDYLQFTKLDRRFHNIIVEASQNSMLKKVWDKLGIE YWTWQGLKFLKENQLYNFKDQVDRHQAIYEAIKNEDSQKAELIIEDHFPGELIEQIKN NEE" misc_feature complement(2028643..2028840) /locus_tag="Acear_1926" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature complement(order(2028652..2028663,2028667..2028672, 2028700..2028702,2028709..2028714,2028718..2028732, 2028754..2028759,2028832..2028834,2028838..2028840)) /locus_tag="Acear_1926" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature complement(2028241..2028618) /locus_tag="Acear_1926" /note="FCD domain; Region: FCD; cl11656" /db_xref="CDD:196275" gene complement(2029282..2030412) /locus_tag="Acear_1927" /db_xref="GeneID:9513986" CDS complement(2029282..2030412) /locus_tag="Acear_1927" /note="InterPro IPR002559:IPR012337; KEGG: bth:BT_2222 transposase; PFAM: transposase IS4 family protein; SPTR: B7AMN0 Putative uncharacterized protein; PFAM: transposase DDE domain" /codon_start=1 /transl_table=11 /product="transposase IS4 family protein" /protein_id="YP_003828493.1" /db_xref="GI:302392673" /db_xref="GeneID:9513986" /translation="MNNCTMLLNKLLEVIDINFLDKVVDKYNADYKVHKLTTKVHLLY LLYFHLTEKKSLADFVVNLKVDSNLKKELPQISVSQLSRKNENRSYQIFADIFSHLFD KLKNKQGFKETIKDIGSIKIIDSSIISLCLSLFAWAKFRKSKGGIKLHTLYDAESGAP ENIIVTNAIVHDKEIFDNLTFDSGCTYIFDRAYIDYQKFDDFIENDIYFVTRTKSNTK IEVVRTLEPTKDDKEANILLDADVILGSTDKRMKHELRLIKVKTTDRQGNEKEIEIIT NRFDLPAHQIAQLYKERWEIELFFKWIKQHLKIKRFFGHNENAVLIQIYSTIILYLLL KLIKQKSKFNGRLLNLTRRIKYSILMTVPHTFNWKDWCHSFS" misc_feature complement(2029453..>2029896) /locus_tag="Acear_1927" /note="FOG: Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG3385" /db_xref="CDD:33192" gene complement(2030571..2032058) /locus_tag="Acear_1928" /db_xref="GeneID:9513987" CDS complement(2030571..2032058) /locus_tag="Acear_1928" /note="KEGG: cac:CAC3565 cell adhesion domain-containing protein; SPTR: A3Y9M0 Uncharacterized secreted protein, containing cell adhesion domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828494.1" /db_xref="GI:302392674" /db_xref="GeneID:9513987" /translation="MKRKFIIILILLLIFLLSGCSSILKNFKDETPPKIVKVQPTDGA KDVDISSEIKVYFNEKLAENSIKSSILLIRKDTGKVMEADVSYKNKVITLDPKRKYVD IGNKIVLRGVKTGLEYQIFIKDDIKDDSGNSLKENHSFEFKTSDLDYGLYWFGPNGEC EKYVDGRKNEYYDPQKPVVIYSHGWQPGLYESTFTQDQPYIRSTHNYSINTGKIWRKK GYNIGAWMWGQFAAEGFLEDEIIRVEDAEAKIWFDKNIRYKVRNGSYRYFNQKKSVHE IFYDTYIKALRNNTNENIRLVGHSIGNQVVITLAHKISNNIKENNLDSHYMPKRIALL DPYWSNSHFSNGKSIANVISDYAMEMATKNDVVIENYRTTKTSTLIGDLNYALQDIAA VYRVNAGFLDYLKKLTKFRKEHNYATTWYFWSMKYDIPANNNGVIGARASNYKIKQCM NIHRNSTWFWKMNWFGVGNMAGEETPSPYDDEFTMESGVISAIGN" gene 2032551..2033015 /locus_tag="Acear_1929" /db_xref="GeneID:9513988" CDS 2032551..2033015 /locus_tag="Acear_1929" /note="KEGG: pth:PTH_2129 hypothetical protein; SPTR: A5D0C1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828495.1" /db_xref="GI:302392675" /db_xref="GeneID:9513988" /translation="MQQTQLILSIFQFILEGIALSFSTAIFLKIKIDNKKILIIGLIS ALLGFFFRKLPIVFGFHSILSILLFTILLNLFYKKEIVKCFIAVAKAFILLSVFEILT GNIFIYLTNKTVKEIINNPYLKTLAVLPQSILLFLLGFIMLQIRKRRDKVEL" gene 2033005..2033628 /locus_tag="Acear_1930" /db_xref="GeneID:9513989" CDS 2033005..2033628 /locus_tag="Acear_1930" /note="COGs: COG4512 Membrane protein ly involved in post-translational modification of the autoinducing quorum-sensing peptide; InterPro IPR006741; KEGG: cbh:CLC_0389 accessory gene regulator protein B; PFAM: accessory gene regulator B; SMART: accessory gene regulator B; SPTR: C1I303 accessory gene regulator protein B; PFAM: accessory gene regulator B" /codon_start=1 /transl_table=11 /product="accessory gene regulator B" /protein_id="YP_003828496.1" /db_xref="GI:302392676" /db_xref="GeneID:9513989" /translation="MSYKQAIQTLSSYIAEELNLPDKKQDRIRFGLELLVSTLMSLST SLILAKLLGIFNSVLFILFASAVLKSVSGGIHLKTPWECALFGALFFNILGLTAVVMK TSIYNNWVLFLIISSLYIFISLLLWSPADVEEKPIKGDKKRKTLKMISVILSSILLVL VAVSFFVYEEQFALFNISVILGLLFQSSTISPAAYKLLEFYYQVRKL" misc_feature 2033023..2033601 /locus_tag="Acear_1930" /note="Accessory gene regulator B; Region: AgrB; cl01873" /db_xref="CDD:186484" gene 2033696..2033824 /locus_tag="Acear_1931" /db_xref="GeneID:9513990" CDS 2033696..2033824 /locus_tag="Acear_1931" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828497.1" /db_xref="GI:302392677" /db_xref="GeneID:9513990" /translation="MKKLMKKLAMNSLATVLLVIATVGVIGPTCFMGFYQPELPEE" gene 2033899..2035560 /locus_tag="Acear_1932" /db_xref="GeneID:9513991" CDS 2033899..2035560 /locus_tag="Acear_1932" /note="COGs: COG2206 HD-GYP domain; InterPro IPR000160:IPR006675:IPR006674:IPR003607; KEGG: pth:PTH_2130 hypothetical protein; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; SMART: GGDEF domain containing protein; metal-dependent phosphohydrolase HD region; SPTR: A5D0C2 Putative uncharacterized protein; TIGRFAM: diguanylate cyclase; metal dependent phophohydrolase; PFAM: HD domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; uncharacterized domain HDIG" /codon_start=1 /transl_table=11 /product="diguanylate cyclase and metal dependent phosphohydrolase" /protein_id="YP_003828498.1" /db_xref="GI:302392678" /db_xref="GeneID:9513991" /translation="MDHKNFDWQKLRQNKIKNYTIFSYVMALLLLGMIVLEFFSCSNF GVFPYLTVSIPALILITCFISKYLNNKTIISSPRKNNYFLFILFVSLITILVLKNITF DKHLLKIYYLIPIILSAINYSQSLGFFTAGYSSLNLLMLNYLLNDFSKLDFDIIIIIL FFWVAWLIGGFIDLEQKVQEQLEKIAVTDNLTSLPNYANFQTTLDSWLEKAKDEQIPL SLALMDLDNFKFFNDSLGHQKGDELLKQTATLVKEQIDEDIFFARYGGDEFAFLFLGH NQETALKKIKKIKKVVQKKITIPYEDFLEEKPTFSLGVASYPDQALTKQELIDMADYA LYQAKTTQKDQVEIYHKALNELADELEESERESFNSIRTLLSIINAKDKYTYAHSERI ANYAKKFAKELKLSEEETKRLVYGAFLHDIGKIEVEREILMKQEKLDESEWKMIKKHP KIGNKILAPLQFSQEIKPIVLYHHENFDGTGYPEGLKGNEIPFYARILRILDSFDAIT TNRPYSSAASKQEALKELKKETGKQFDPQLVKVFLKVAKKDIKLN" misc_feature 2034460..2034939 /locus_tag="Acear_1932" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(2034568..2034570,2034697..2034699) /locus_tag="Acear_1932" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(2034583..2034585,2034592..2034597,2034607..2034609, 2034619..2034621,2034685..2034687,2034691..2034702) /locus_tag="Acear_1932" /note="active site" /db_xref="CDD:143635" misc_feature order(2034673..2034675,2034757..2034759) /locus_tag="Acear_1932" /note="I-site; other site" /db_xref="CDD:143635" misc_feature 2035048..2035476 /locus_tag="Acear_1932" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cd00077" /db_xref="CDD:28958" misc_feature order(2035060..2035062,2035156..2035161,2035402..2035404) /locus_tag="Acear_1932" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28958" misc_feature 2035159..2035161 /locus_tag="Acear_1932" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:28958" gene complement(2035694..2036713) /locus_tag="Acear_1933" /db_xref="GeneID:9513992" CDS complement(2035694..2036713) /locus_tag="Acear_1933" /EC_number="3.5.3.8" /note="COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR005923:IPR006035; KEGG: ctc:CTC01812 formiminoglutamase; PFAM: Arginase/agmatinase/formiminoglutamase; SPTR: C6PUL0 Formiminoglutamase; TIGRFAM: formiminoglutamase; PFAM: Arginase family; TIGRFAM: formimidoylglutamase" /codon_start=1 /transl_table=11 /product="formiminoglutamase" /protein_id="YP_003828499.1" /db_xref="GI:302392679" /db_xref="GeneID:9513992" /translation="MNVYMIFNKCYQPVDKEIWQGRIDDTDDFTAFRWHQWIELIDLT DENLNPIVDKKQGFCFLGFRGDQGVKRNGGRPGAAKGPISIRRELANLPVRFDRETKL FDAGNISSSDASMEIQQEALALAIKKIIDLDLFPLLLGGGHEIALGHYNGLLKSKINN DQKPKIGIINFDAHFDLRPYPDGGNSGTMFRQIADQCQSSGIDYSYLAVGIQKCGNTV SLFKTADELGVDYILAEDITEFNILDILNKLDSYINQNDYIYLTICSDVFSSAFAPGV SSIQPLGIEPEIALNLIKHIMKSNKVISCDIAEVSPRFDLDNSTAKLAAIIIFAIINT LVGRE" misc_feature complement(2035745..2036683) /locus_tag="Acear_1933" /note="Arginase family; Region: Arginase; cl00306" /db_xref="CDD:193759" gene complement(2037353..2038528) /locus_tag="Acear_1934" /db_xref="GeneID:9513993" CDS complement(2037353..2038528) /locus_tag="Acear_1934" /EC_number="3.5.1.14" /note="COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650:IPR017439; KEGG: pho:PH1043 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: Aminoacylase; SPTR: O58754 387aa long hypothetical amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain; TIGRFAM: amidohydrolase" /codon_start=1 /transl_table=11 /product="amidohydrolase" /protein_id="YP_003828500.1" /db_xref="GI:302392680" /db_xref="GeneID:9513993" /translation="MNLKEEVESINNEIIEWRRDFHKHPELPFEEERTSNIVENLLTE WGLETERMARTGVIGLLEGEEEGKTIAIRADMDALPITEKNDVEYKSQEEGKMHACGH DAHTAMALGAAKVLSKYRHLLSGNVKFIFQPAEEGAGGAEPLIEEGVLNNPTVDAIFG MHVAPEVPSGKIGLKPGPIMASADDFKLTIKGHGTHGAQPHEGVDPITIGSNIIMSLQ QLISREIKALKSAVLSIGAFKSGDACNIIPDRAEILGTLRTLDPELRCYLKDRIEEVI ENVTQAMKADYELEYICQMPVTSSDPEFIEMIKEVNENMNPGSNFMIDEPSMGSEDFG YFLEEVSGAYVLLGIRNLDKGLIHPLHNPKFNIDEDVLSSGVELICENVLKYLNDEK" misc_feature complement(2037365..2038480) /locus_tag="Acear_1934" /note="Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]; Region: AbgB; COG1473" /db_xref="CDD:31662" misc_feature complement(2037377..2038480) /locus_tag="Acear_1934" /note="M20 Peptidase Aminoacylase 1 family; Region: M20_Acy1; cd03886" /db_xref="CDD:193507" misc_feature complement(order(2037446..2037448,2038043..2038045, 2038121..2038123,2038223..2038225,2038229..2038231)) /locus_tag="Acear_1934" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193507" misc_feature complement(order(2037761..2037769,2037785..2037787, 2037791..2037796,2037806..2037826,2037875..2037877, 2037884..2037886,2037893..2037895,2037905..2037910, 2037974..2037976)) /locus_tag="Acear_1934" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:193507" gene complement(2038580..2040121) /locus_tag="Acear_1935" /db_xref="GeneID:9513994" CDS complement(2038580..2040121) /locus_tag="Acear_1935" /EC_number="4.3.1.3" /note="COGs: COG2986 Histidine ammonia-lyase; InterPro IPR005921:IPR001106:IPR008948; KEGG: aoe:Clos_1187 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; PRIAM: Histidine ammonia-lyase; SPTR: A8MF64 Histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase" /codon_start=1 /transl_table=11 /product="histidine ammonia-lyase" /protein_id="YP_003828501.1" /db_xref="GI:302392681" /db_xref="GeneID:9513994" /translation="MKEVILDGSRLSLYDVIEVARNHKPVKLDDEAKERVKSSRAVVD KFVEREEVVYGITTGFGELSEVFIAKDKTEELQENLICSHSCGVGDCFEEEVVRTIML LRANALAKGVSGIRLDTLQLLINMINEGVHPVIPEKGSLGASGDLAPLAHMVLVMINR GEAFYQGERITGKEAMEQAGIEPVQLKAKEGLALINGTQVMTAVGALVVYDAINLAKM ADISAALTLEALKGITDPFDKRVHEVRSHKYQMTTARDLLRLTEGSDLTTRQGELRVQ DAYTLRCLPQIHGASKDAIEYVKKKVDIEMNSATDNPLIFVEEEDVISGGNFHGQPMA LGFDFLGTAIAELANVSERRIERLVNPNLSGLPAFLVNNEGVNSGFMITQYVAASLVS ENKVSAHPASVDSIPSSANQEDHVSMGTIAARKAKDILYNTSRVLAIELLAAVQAIDL VNPDGKNLGKGTAAAYQKVREKIDKLDEDRVMYEDINQSVDLIKEEKIIQAVEQEIGE LNKEL" misc_feature complement(2038643..2040106) /locus_tag="Acear_1935" /note="tyrosine 2,3-aminomutase; Region: Tyr_2_3_mutase; TIGR03832" /db_xref="CDD:163544" misc_feature complement(2038772..2040091) /locus_tag="Acear_1935" /note="Phenylalanine ammonia-lyase (PAL) and histidine ammonia-lyase (HAL); Region: PAL-HAL; cd00332" /db_xref="CDD:176460" misc_feature complement(order(2039150..2039152,2039186..2039188, 2039276..2039278,2039285..2039287,2039534..2039536, 2039546..2039560,2039882..2039884,2039891..2039893, 2039942..2039944,2039948..2039950,2039954..2039962)) /locus_tag="Acear_1935" /note="active sites [active]" /db_xref="CDD:176460" misc_feature complement(order(2038826..2038831,2038838..2038840, 2038847..2038852,2038868..2038870,2038877..2038897, 2038928..2038939,2038943..2038960,2038964..2038966, 2038970..2038981,2038985..2038990,2038994..2038999, 2039033..2039035,2039042..2039044,2039051..2039053, 2039063..2039065,2039075..2039077,2039084..2039086, 2039105..2039107,2039117..2039119,2039126..2039131, 2039135..2039155,2039159..2039161,2039174..2039182, 2039195..2039200,2039207..2039212,2039219..2039224, 2039231..2039233,2039240..2039245,2039261..2039266, 2039273..2039278,2039282..2039290,2039294..2039296, 2039372..2039374,2039381..2039383,2039387..2039392, 2039399..2039404,2039657..2039659,2039666..2039668, 2039705..2039710,2039792..2039794,2039855..2039878, 2039885..2039887,2039942..2039947)) /locus_tag="Acear_1935" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:176460" gene complement(2040264..2041685) /locus_tag="Acear_1936" /db_xref="GeneID:9513995" CDS complement(2040264..2041685) /locus_tag="Acear_1936" /note="COGs: COG1288 membrane protein; InterPro IPR018385; KEGG: nth:Nther_1853 C4-dicarboxylate anaerobic carrier; PFAM: C4-dicarboxylate anaerobic carrier-like; SPTR: B2A608 C4-dicarboxylate anaerobic carrier; PFAM: C4-dicarboxylate anaerobic carrier" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate anaerobic carrier" /protein_id="YP_003828502.1" /db_xref="GI:302392682" /db_xref="GeneID:9513995" /translation="MANEGVVEKNENEKKFKAPDAIVLIVALLIVTSIFTYLLPAGEY NRIVDPETGRKIVEVGSYHQVADRAVSAWGLLQSIPKGMNKAASIINFLLIIGGIFGI LEATGSIEKLMSLAINKLKGKERLVVPVILTAWALGGAIIGNFEESLAFIPLQITLTL ALGFDSILGVALALCGVGVGYVAAILNPFTVGIAQEIAGVPMFSGVGFRAVVFITFVA VTIIYLYRYAGKIKDNPELSPVYEIDKDSPYIDSDLHDEEVGFTTKHKLVLTVFILGI GVLIYGVMQHGFYLTKIAAVFVGMGAMMGIVGGLDINEIVDGFVEGAHNLLYASIVVG FARAITVVMSDGKILDVIIHGMASMMSGLPKSLSAVGMFFLQMVINLFVSSGSGQAVL SMPIMAPLADVFELTRQTAVLAFQFGDGITNLVTPTSGALMAALAIGKIPWGKWIKWF APLFMIWVSLASIFMFIAVKMSF" misc_feature complement(2040267..2041631) /locus_tag="Acear_1936" /note="Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices...; Region: ArsB_NhaD_permease; cl09110" /db_xref="CDD:197433" misc_feature complement(2040273..2041631) /locus_tag="Acear_1936" /note="Predicted membrane protein [Function unknown]; Region: COG1288" /db_xref="CDD:31479" gene complement(2042063..2045128) /locus_tag="Acear_1937" /db_xref="GeneID:9513996" CDS complement(2042063..2045128) /locus_tag="Acear_1937" /note="COGs: COG3899 ATPase; InterProIPR018488:IPR019734:IPR013026:IPR005158:IPR 001440:IPR011990; KEGG: ctc:CTC02319 serine/threonine kinase, regulatory protein; PFAM: transcriptional activator domain; TPR repeat-containing protein; SPTR: Q891Q0 serine/threonine kinase, regulatory protein; PFAM: Bacterial transcriptional activator domain" /codon_start=1 /transl_table=11 /product="transcriptional activator domain protein" /protein_id="YP_003828503.1" /db_xref="GI:302392683" /db_xref="GeneID:9513996" /translation="MPKLEVTVLGTPVVELDGKPIDFPYKKVEALLYYLVVKKKTRRN KLASLLWGDMEESKAKKNLRNALYQLKKTVGDQVIETPDRFIVTLDDNCDLQLDLDEF LANKDASSIKLYEGEFLNDFLVKNASEFNDWVFEQMNYCEQLYIKLLKQQIKECKAAG QLQQGISYLETLLEVNEFDEIAYRDLMEFYSEQGNIAKAIETYKLLEDQLETKLGITP DKKTVELLQNIKENISANIEEDNSIDKEFIGREEELEAVMNLLYRFTAGAQNHSCFVF GEAGIGKTELVRQALASVRLENCLVVKTNCYQAEERYIFKPWKNILQQLKEQINLANI DLPPLWKRAISFLFPSILTEDDESALDELVNCDSIQYQSAVEALLFLVSEIAKEQKLV LVFEDLQWCDDRSLLLLRNLIRENENNNILVLATSRNQRRERVEEFFADLKRHDLLTE ITLNRLNLSEVKDFAQKTLPDYQFSKDLLIKIHQETEGNIFFLVELLNLLAEDGKEEA LANLLTVKSKNILRNRVLSVSKEAQKILRLASICFDNFSYELLAAISDKNDLELIEIL EELQNYYLIEELSVNQREGLTYRFTHSKLREFIYEQQSRSRVRLLHRRIAQFFEEQLQ ETARSRNYYSKLIHHYSQAGDKFKHLTYLIKEAEMYFYYTHELFPIISDRRLAKDNIL SFNQEWPQYYLSKVEDLLKEIEWKSDNSFELRKMEVKFLNLQSHFLIAQGDYEAAIDQ IEKLINEAKLINDYGILLEAYEKMASLGIQKENTNLIEKNAVEMYDLAKKQKANVKEG IALRFLGIVRLYQRQYSKAEELFNQALDVFKEAETVRKKYTLGIATVYNYLGEVKRYQ GEFEQAINFYQHSIDLCENQDILSGVGIFYVNAGQMFYKLENYKKAQNYFFQSLKIFQ QLRTIWGYSVIANSFMALLSIQTGSYKEAYDYIVNSDAIIEQCYKRYWAGILLRSKAE IAKQMNNDNQLREVFSDRLDLDYRKYAQQALDIFEAIGADYEVELMKKL" misc_feature complement(2044442..2045122) /locus_tag="Acear_1937" /note="DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms]; Region: DnrI; COG3629" /db_xref="CDD:33428" misc_feature complement(2042072..2044390) /locus_tag="Acear_1937" /note="Predicted ATPase [General function prediction only]; Region: COG3899" /db_xref="CDD:33687" misc_feature complement(2042390..2042731) /locus_tag="Acear_1937" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(2042441..2042446,2042453..2042458, 2042465..2042470,2042564..2042569,2042576..2042581, 2042585..2042590,2042708..2042713,2042720..2042725, 2042729..2042731)) /locus_tag="Acear_1937" /note="binding surface" /db_xref="CDD:29151" misc_feature complement(order(2042402..2042404,2042411..2042413, 2042423..2042425,2042459..2042461,2042522..2042524, 2042531..2042533,2042543..2042545,2042579..2042581, 2042657..2042659,2042666..2042668,2042678..2042680, 2042714..2042716)) /locus_tag="Acear_1937" /note="TPR motif; other site" /db_xref="CDD:29151" gene complement(2045208..2046452) /locus_tag="Acear_1938" /db_xref="GeneID:9513997" CDS complement(2045208..2046452) /locus_tag="Acear_1938" /EC_number="3.5.2.7" /note="COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR005920:IPR006680:IPR011059; KEGG: ctc:CTC02320 imidazolonepropionase; PFAM: amidohydrolase; PRIAM: Imidazolonepropionase; SPTR: Q891P9 Imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase" /codon_start=1 /transl_table=11 /product="imidazolonepropionase" /protein_id="YP_003828504.1" /db_xref="GI:302392684" /db_xref="GeneID:9513997" /translation="MSKLLIKNAKELVTCKGRAPKTGAKMNELEIITDGALRIEDGII TQVGKTKEIISEIDEAEFEVIDASGQAVLPGFIDSHTHFVFGGYRADEFNWRLQGMPY TEIMERGGGIVNSVESTRQASPADLKEDAQNRLDSMLSFGITTVEGKSGYGLDLETEL KQLKVMEELNHEHAVDIVSTFLGAHAIPAEYEDRSADFIDYLIEEVMPVVVKETAVDF CDVFCDQGIFSVKEARKILLAGQKLGLKSKLHADEIAQIGGAELAAEIGAVSADHLLK ASDCGIERMAEGKVVGTLLPITAFSLKEEYARGRYMIDNGMSVALATDLNPGSCYSES IPLLFALATLYMELTIEEAVTALTINGAAAVDRAEQVGSLEVGKRGDVVILDAPSYTH LAYHIGVNSVDKVVKAGEVVVN" misc_feature complement(2045253..2046419) /locus_tag="Acear_1938" /note="Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]; Region: HutI; COG1228" /db_xref="CDD:31421" misc_feature complement(2045253..2046338) /locus_tag="Acear_1938" /note="Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria...; Region: Imidazolone-5PH; cd01296" /db_xref="CDD:30039" misc_feature complement(order(2045481..2045483,2045634..2045636, 2045694..2045696,2045703..2045705,2046207..2046209, 2046213..2046215)) /locus_tag="Acear_1938" /note="active site" /db_xref="CDD:30039" gene complement(2046452..2047354) /locus_tag="Acear_1939" /db_xref="GeneID:9513998" CDS complement(2046452..2047354) /locus_tag="Acear_1939" /EC_number="4.3.1.4" /note="COGs: COG3643 glutamate formiminotransferase; InterPro IPR004227:IPR012886:IPR013802; KEGG: aoe:Clos_0580 glutamate formiminotransferase; PFAM: Formiminotransferase domain protein; Formiminotransferase domain protein; PRIAM: Formimidoyltetrahydrofolate cyclodeaminase; SPTR: A8MLX5 glutamate formiminotransferase; TIGRFAM: glutamate formiminotransferase; PFAM: Formiminotransferase domain, N-terminal subdomain; Formiminotransferase domain; TIGRFAM: glutamate formiminotransferase" /codon_start=1 /transl_table=11 /product="glutamate formiminotransferase" /protein_id="YP_003828505.1" /db_xref="GI:302392685" /db_xref="GeneID:9513998" /translation="MAQILECIPNFSEGQDEEKIEKIVQPFKDISGVKLLDYSADKDH NRLVVTMIGSPDALKKSVLEAMEIAVDLIDMNEHAGEHPRMGAVDVVPFTPVRGVTME EAVELANEVAQEASEKMELPIYLYEEAATTPERKNLADIRRGEFEGFADKIQQPEWKP DYGPAELHSTAGASVIGARMPLVAFNVNLDTDDLEIANEIARKVRHSGGGLRYCKAIG IDLNERGITQVSMNMTDYTKTALYQSYEMVKFEAERYGVDVIGSELIGLLPAQALFDV AEYYLGVEDFSGDQIMENRLLEEL" misc_feature complement(2046461..2047354) /locus_tag="Acear_1939" /note="glutamate formiminotransferase; Region: FtcD; TIGR02024" /db_xref="CDD:131079" misc_feature complement(2046815..2047348) /locus_tag="Acear_1939" /note="Formiminotransferase domain, N-terminal subdomain; Region: FTCD_N; pfam07837" /db_xref="CDD:191867" misc_feature complement(<2046512..2046811) /locus_tag="Acear_1939" /note="Formiminotransferase domain; Region: FTCD; pfam02971" /db_xref="CDD:111818" gene complement(2047491..2048099) /locus_tag="Acear_1940" /db_xref="GeneID:9513999" CDS complement(2047491..2048099) /locus_tag="Acear_1940" /note="COGs: COG3404 methenyl tetrahydrofolate cyclohydrolase; InterPro IPR007044; KEGG: nth:Nther_0428 formiminotransferase-cyclodeaminase; PFAM: Formiminotransferase-cyclodeaminase; SPTR: C4EVJ9 methenyl tetrahydrofolate cyclohydrolase; PFAM: Formiminotransferase-cyclodeaminase" /codon_start=1 /transl_table=11 /product="Formiminotransferase-cyclodeaminase" /protein_id="YP_003828506.1" /db_xref="GI:302392686" /db_xref="GeneID:9513999" /translation="MSFADYSIDEFTAELASDAATPGGGSVAGLCGSLSASLIAMVIR LTKENDLDHDTAELEELQIEALELIDEDSESFDQVMAAFKLPKETEEEQEKRSRAIQE AMKEAAITPLETMKLGLELLKIAVKVVREGNANAVSDAGVAGLLALDAVKGGRYNVLI NAESLTDEADAGELKDKSEEILAEAEELAAEIERIAEERILG" misc_feature complement(2047593..2048081) /locus_tag="Acear_1940" /note="Formiminotransferase-cyclodeaminase; Region: FTCD_C; cl01350" /db_xref="CDD:194108" gene complement(2048133..2050160) /locus_tag="Acear_1941" /db_xref="GeneID:9514000" CDS complement(2048133..2050160) /locus_tag="Acear_1941" /EC_number="4.2.1.49" /note="COGs: COG2987 Urocanate hydratase; InterPro IPR000193; KEGG: kol:Kole_0448 urocanate hydratase; PFAM: Urocanase; PRIAM: Urocanate hydratase; SPTR: C5CE63 Urocanate hydratase; TIGRFAM: urocanate hydratase; PFAM: Urocanase; TIGRFAM: urocanate hydratase" /codon_start=1 /transl_table=11 /product="urocanate hydratase" /protein_id="YP_003828507.1" /db_xref="GI:302392687" /db_xref="GeneID:9514000" /translation="MEFDVSKAMKIKLSDELPEKTEFKEGIRRAPRRELNLSQEEMEL ALKNALRYIPPKLHEELAPEFMDELLTHGRIYGYRYRPEGEIKAKPIHEYKGKTLEGK ALQLMIDNNLDFDVALYPYELVTYGETGQVCQNWMQYRLIKKYLQEMTQDQTLVVQSG HPLGLFPSKPEAPRVISTNGLMVGMYDNLENFNKAAALGVANYGQMTAGGWMYIGPQG IVHGTYNTLLNAGRKFLDNDLDEDLSGQLYITSGLGGMSGAQAKAVEIAGGIGVIAEV DESRIETRHEQGWLSKISDDLDEIFDWVAEYQQSGEAVSIAYHGNVVDLLDYVVENDI EVDLLSDQTSCHEPYTGGYNPVGFTFEEGRELLNNKPEEFRKEVDKSLRKHYSLIKKL VDRGAYFFDYGNSFMKAVYDAGVKEIAKNEDDPTQGFIFPSYVEDVMGPICFDYGYGP FRWVCLSGKDEDLRKTDQAAMECIDPDRRAQDYDNYQWIADAEENELVVGSKARILYA DGPGRVEIALKFNELVREGEIGPVMLGRDHHDVSGTDSPFRETANIKDGSNIMAEMSV HCFAGNCARGMTLAVESNGGGVGIGKAFNGGFGLVLDGSKRVDEIIKSALDWDVHSGV ARRAWARNENAIETMMDWNKEHGAKGHATLPYQPEEGLVEDTVANSLKEQN" misc_feature complement(2048187..2049938) /locus_tag="Acear_1941" /note="urocanate hydratase; Provisional; Region: PRK05414" /db_xref="CDD:180062" misc_feature complement(2048250..2049896) /locus_tag="Acear_1941" /note="urocanate hydratase; Region: hutU; TIGR01228" /db_xref="CDD:130295" gene 2050677..2051978 /locus_tag="Acear_1942" /db_xref="GeneID:9514001" CDS 2050677..2051978 /locus_tag="Acear_1942" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: tex:Teth514_2350 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003828508.1" /db_xref="GI:302392688" /db_xref="GeneID:9514001" /translation="MKLAKYFIHKPNQTQQIVLGCLAYASARLYNIGNYQRKNWSKDS DKEYPDWYKQKKQLKENFWYKNLPSQTAQETLKILADNWDSFYQSKKDYQNNPDKYTG EPNPPNYKPKDSKFNFRYLNNGFKIIDGKLRLSIPKQLKKYLKEEYSITNKFLWIRVP NELLSSNRDVLNSTTRIEFKPLSDDTYKVILTYKVDTPTIKEDNGNYLSIDLGINNLM TCYSNQNQESFIIDGGQYLAINRYFDKKIKHYQSILNGQGKKTSKRIQQLYKKRRKQL FHLIHSATKKVVDYCIKHNISRVIVGDIKNIRDDADLGKQNNQKLHKLPFDIIYHQLE YKLNLQGITLIKKSEKYTSQCSPYSKKVTKKYGDKSNRIKRGLYVDKNNNQAFNADSV GSFNILRKYLQQRRKGKDITLQVKGLSNPVKYSWNDHQFAA" misc_feature 2050677..2051882 /locus_tag="Acear_1942" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature 2050863..2051600 /locus_tag="Acear_1942" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature 2051490..2051735 /locus_tag="Acear_1942" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature 2051652..2051876 /locus_tag="Acear_1942" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene complement(2052058..2053131) /locus_tag="Acear_1943" /db_xref="GeneID:9514002" CDS complement(2052058..2053131) /locus_tag="Acear_1943" /note="InterPro IPR008844; KEGG: amt:Amet_0872 spore germination B3 GerAC family protein; PFAM: spore germination B3 GerAC family protein; SPTR: A6TLM9 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family" /codon_start=1 /transl_table=11 /product="germination protein, Ger(x)C family" /protein_id="YP_003828509.1" /db_xref="GI:302392689" /db_xref="GeneID:9514002" /translation="MINGMIKKILILLILIFTVLPLTGCWDIREIEQTQFPSYITVDK AKEEVAAPYLYSLQFPILRPKAPKKVNNLSVTAYSIENAINNLQNRSVGVISLGMLKT IIFSKEVAKEGLLPQIDALWRNPLIPGSVLLAITPKQAAKIKKVKVPTTENRGQYLDL LFRTTSRNTLLPERNLTNFFSNLKTTGIEPVIPIIKYGKTDIKIIGTALFRKDKMIGK LQVPETRSLALLKENFSKGEIALKVDNHIVTYYVQQTNSQIKPSYHDGKFTFNINLEL DVDVVENTSSKRLTDNKTALANMERHLESALKKEIDNLFTELQKYKSDAIGIGRRVKV KDRELLGIEIPSFMVACFYGSYP" misc_feature complement(2052127..2053083) /locus_tag="Acear_1943" /note="Spore germination B3/ GerAC like, C-terminal; Region: Spore_GerAC; cl05194" /db_xref="CDD:195053" gene complement(2053121..2054094) /locus_tag="Acear_1944" /pseudo /db_xref="GeneID:9514003" gene complement(2054066..2054584) /locus_tag="Acear_1945" /pseudo /db_xref="GeneID:9514004" gene complement(2054824..2054940) /locus_tag="Acear_1946" /pseudo /db_xref="GeneID:9514005" gene 2055056..2056681 /locus_tag="Acear_1947" /db_xref="GeneID:9514006" CDS 2055056..2056681 /locus_tag="Acear_1947" /note="InterPro IPR004995; KEGG: mta:Moth_2042 GerA spore germination protein; PFAM: GerA spore germination protein; SPTR: Q2RGV1 GerA spore germination protein; PFAM: Bacillus/Clostridium GerA spore germination protein" /codon_start=1 /transl_table=11 /product="GerA spore germination protein" /protein_id="YP_003828510.1" /db_xref="GI:302392690" /db_xref="GeneID:9514006" /translation="MWRYLKNWIKDMYTLQQNKRGTTKEKFFNDLTRNEELLTNKFQN IDDIKFRHLKLTNESNQQIDATLVYITNLIDKEIINNNIIKPLLSEDNQNLSLAEKDT ETISSKIIDAENIERIDKVNKAVNDILAGKSILLVDQSSHVLSISTQGWEERSVERPI TERTVRGPSDGFTENIKTNTGLIRRRIKDKQLKVESFTKGSYTNTQINVLYAEDIVNS KIVAEVKKRLNSINVDQITGPRHIMELIEDNPLSPFDTIYETERPDIATAGMLEGRVT ILIDGYPTALVAPMLFMENLVSPEDYYYNFYYTLGARAIRFLGFLVSALLPAIYIAIL AFHQEVLPITLVNKIYSAREGVPFPIAIEMIIFGAFFEGIKEAGARIPQALGPSVTIV GALILGEAAINAGLLSPDSVIIGSITGISIFLMPTTEFNNTLLLIRLLFVLGAATSGF FGITLAVLWITMHLTNLRSFGIPFMRPVAPLQLQDLKDFFMRVPYLVMNTRPKSLETE EVNRQNNQPIKRFFFKYDLQEQDTKNEVTDNEN" misc_feature 2055155..2056570 /locus_tag="Acear_1947" /note="Bacillus/Clostridium GerA spore germination protein; Region: GerA; pfam03323" /db_xref="CDD:190601" gene 2056671..2057756 /locus_tag="Acear_1948" /db_xref="GeneID:9514007" CDS 2056671..2057756 /locus_tag="Acear_1948" /note="InterPro IPR004761; KEGG: dsy:DSY1191 hypothetical protein; PFAM: spore germination protein; SPTR: Q24YB2 Putative uncharacterized protein; TIGRFAM: spore germination protein; PFAM: spore germination protein; TIGRFAM: spore germination protein (amino acid permease)" /codon_start=1 /transl_table=11 /product="spore germination protein" /protein_id="YP_003828511.1" /db_xref="GI:302392691" /db_xref="GeneID:9514007" /translation="MKTRISPYQATLLLVSTIIGTAIVLLPTLIVQDAKQDAWLSGII LIAFALIISIIYSLIANRMERTDLIAFSRQTFGQIITTILTGGLVIYFVITSGTVTRQ ISEIMVSTYLPETPLWFLNLNIILTAAAFVYYGLEVTARVLEIIFYLFLVTFLIAIII LTKDMSPAFLQPVLSEGFKPILKSIYPGLVIFGEFFIVLIFAPQIAEPNKVYKSLVSS IAISGVLMMIVILSTLMIFGPGMTANLTFPLLSAHRYAQALGVIERLDPLFIFYWVGG GVLKAAIFFYGAVYTIQKLFRLSTYYIIIPFTIPPIFYISSYYFKNVRELADFLHQMV PLYIAIQVVYPILLLIFSTLRGVDSSD" misc_feature 2056680..2057564 /locus_tag="Acear_1948" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene 2057749..2058945 /locus_tag="Acear_1949" /db_xref="GeneID:9514008" CDS 2057749..2058945 /locus_tag="Acear_1949" /note="InterPro IPR008844; KEGG: dhd:Dhaf_0845 germination protein, Ger(X)C family; PFAM: spore germination B3 GerAC family protein; SPTR: Q24NX6 Putative uncharacterized protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family" /codon_start=1 /transl_table=11 /product="germination protein, Ger(x)C family" /protein_id="YP_003828512.1" /db_xref="GI:302392692" /db_xref="GeneID:9514008" /translation="MTKLKQILTILLICCLATIVSGCWSSREFDSLALVKGIGVDLAK EEDRVKFTVQLSKPQEQQGGGQSGGAAQQFWTTSSTGYSIFEANRNLVKTVGRQPFYS HSEVVIIGEELARQGIKPYIDLFNRDPELRRRAYIAIARGEEAEKILQSSHGIEPLSA IAVKQIINGQSITGTIFASDLREFTISMLSDTKDTVTAPIQLKEGGPKEESKEEEKNL LYINGGAVFRDDKLVGWLTRKETRGLNWVLKPNEVTGGILIKAPDEEEKITIETVHAK SQVEAQLEDNHFKIKLKIDAEGSIAEDLSRNYNITREANISQLNKRFAQVINNEIINA LKKSQKYKADIFGFGEKINEEYPQEFKKRVDNWDKIYAKLPVKIEVTANIRRPGLIEE GIGTYK" misc_feature 2057809..2058921 /locus_tag="Acear_1949" /note="Spore germination B3/ GerAC like, C-terminal; Region: Spore_GerAC; cl05194" /db_xref="CDD:195053" gene complement(2059442..2061256) /locus_tag="Acear_1950" /db_xref="GeneID:9514009" CDS complement(2059442..2061256) /locus_tag="Acear_1950" /EC_number="2.7.7.4" /note="COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; InterProIPR011779:IPR000795:IPR004161:IPR009000:IPR 009001; KEGG: amt:Amet_3492 sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; PRIAM: Sulfate adenylyltransferase; SPTR: C6PP07 Sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; adenylylsulphate kinase; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; translation elongation factor TU" /codon_start=1 /transl_table=11 /product="sulfate adenylyltransferase, large subunit" /protein_id="YP_003828513.1" /db_xref="GI:302392693" /db_xref="GeneID:9514009" /translation="MTTELAEQKEDLNIVIAGHVDHGKSTIIGRLLADTDSLPEGKLE QVKKTCRKNSKPFEYAFLLDALKDEQSQGITIDSARCFFETEKREYIILDAPGHIEFL KNMVTGAARAEAALLVIDADEGIQENSKRHGYMLSMLGIDQIVVLVNKMDLVDYNQEI YDEIVEDYTEFLHEIDIQPETFLPVSGMEGDNIASLSDNTPWYEDETVLEVLDSFAAE ELPMDQPFRMPVQDVYKFTKGGDDRRIIAGTITSGQVNVGDEVVFYPSGKKSTVKSIE GFNRPTTVSASVGESTGFTLEEQIYITRGEVATIDDEPQPESTSRIKANIFWLGRKEM TKDKEYYLKLGTAKVRARIEEIERVIDASDLSQNEAKDRIERHDVAECILKLDKAIAF DLANEIAETSRFVIVDEHEIAGGGIVQEALEDKQSWIREKVMLRNYKWEKSHITNDER AEKYNQKSTLVLITGEEDVGKKPTAKALEKRLFNDSKIVYFLGIGNVLYGVDADIKGT EENNHRKEHLRRLAEVSNIMLDAGAILAVTAVELTQDDLELIKTTVNPDKIKTVWLGK NVTTDINYDLHIPEFESEKEAAGKIKGLLQEQEIIFKP" misc_feature complement(2059982..2061241) /locus_tag="Acear_1950" /note="GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism]; Region: CysN; COG2895" /db_xref="CDD:32720" misc_feature complement(2060600..2061220) /locus_tag="Acear_1950" /note="CysN_ATPS subfamily. CysN, together with protein CysD, form the ATP sulfurylase (ATPS) complex in some bacteria and lower eukaryotes. ATPS catalyzes the production of ATP sulfurylase (APS) and pyrophosphate (PPi) from ATP and sulfate. CysD, which...; Region: CysN_ATPS; cd04166" /db_xref="CDD:133366" misc_feature complement(order(2060927..2060929,2060936..2060938, 2060984..2060986,2060990..2060992,2061011..2061013, 2061017..2061019,2061023..2061028,2061218..2061220)) /locus_tag="Acear_1950" /note="CysD dimerization site [polypeptide binding]; other site" /db_xref="CDD:133366" misc_feature complement(2061182..2061205) /locus_tag="Acear_1950" /note="G1 box; other site" /db_xref="CDD:133366" misc_feature complement(order(2060756..2060758,2060768..2060770, 2060888..2060893,2060960..2060965,2061017..2061022, 2061158..2061163,2061170..2061172,2061179..2061184, 2061194..2061196,2061200..2061202)) /locus_tag="Acear_1950" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:133366" misc_feature complement(order(2060693..2060701,2060798..2060803, 2060807..2060812,2061056..2061058,2061179..2061190, 2061194..2061196)) /locus_tag="Acear_1950" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133366" misc_feature complement(2061020..2061052) /locus_tag="Acear_1950" /note="Switch I region; other site" /db_xref="CDD:133366" misc_feature complement(2061032..2061034) /locus_tag="Acear_1950" /note="G2 box; other site" /db_xref="CDD:133366" misc_feature complement(2060966..2060977) /locus_tag="Acear_1950" /note="G3 box; other site" /db_xref="CDD:133366" misc_feature complement(2060915..2060971) /locus_tag="Acear_1950" /note="Switch II region; other site" /db_xref="CDD:133366" misc_feature complement(2060801..2060812) /locus_tag="Acear_1950" /note="G4 box; other site" /db_xref="CDD:133366" misc_feature complement(2060693..2060701) /locus_tag="Acear_1950" /note="G5 box; other site" /db_xref="CDD:133366" misc_feature complement(2060330..2060581) /locus_tag="Acear_1950" /note="CysN_NodQ_II: This subfamily represents the domain II of the large subunit of ATP sulfurylase (ATPS): CysN or the N-terminal portion of NodQ, found mainly in proteobacteria and homologous to the domain II of EF-Tu. Escherichia coli ATPS consists of...; Region: CysN_NodQ_II; cd03695" /db_xref="CDD:58086" misc_feature complement(2060006..2060308) /locus_tag="Acear_1950" /note="TCysN_NoDQ_II: This subfamily represents the domain II of the large subunit of ATP sulfurylase (ATPS): CysN or the N-terminal portion of NodQ, found mainly in proteobacteria and homologous to the domain II of EF-Tu. Escherichia coli ATPS consists of...; Region: CysN_NoDQ_III; cd04095" /db_xref="CDD:58077" misc_feature complement(2059475..2059876) /locus_tag="Acear_1950" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(order(2059838..2059849,2059862..2059864)) /locus_tag="Acear_1950" /note="Active site [active]" /db_xref="CDD:73295" gene complement(2061548..2062429) /locus_tag="Acear_1951" /db_xref="GeneID:9514010" CDS complement(2061548..2062429) /locus_tag="Acear_1951" /EC_number="2.7.7.4" /note="COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500:IPR014729:IPR011784; KEGG: amt:Amet_3493 sulfate adenylyltransferase subunit 2; PFAM: phosphoadenosine phosphosulfate reductase; SPTR: C6PP06 phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase family" /codon_start=1 /transl_table=11 /product="sulfate adenylyltransferase subunit 2" /protein_id="YP_003828514.1" /db_xref="GI:302392694" /db_xref="GeneID:9514010" /translation="MDHLDRLENKSIHIIREAYSEFNNLSMLWSIGKDSTVLLWLARK AFFGHVPLPLVHIDTDYKIPEMIEHRDRLAKEWELDMIYGQNEAALENKETFPDGNTT RIECCKNLKSEALKKTLNGTWPRYRMNHNTGKYEVEENPEPYTGVIVGVRADEEGTRS KERYFSPRDTNNDWDLGDQPPEFWDQYKTDFAPGTHVRIHPLLDWKEVDIWRYIEREN IPMVSLYYDQGDGTRYRSLGCAPCTDPVESTASTPQEIVKELESGKFSNIAERAGRKQ DEEDGGGLEELRKEGYM" misc_feature complement(2061554..2062420) /locus_tag="Acear_1951" /note="sulfate adenylyltransferase, small subunit; Region: CysD; TIGR02039" /db_xref="CDD:131094" misc_feature complement(2061716..2062360) /locus_tag="Acear_1951" /note="This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. A highly...; Region: PAPS_reductase; cd01713" /db_xref="CDD:30168" misc_feature complement(order(2061836..2061838,2061848..2061850, 2061953..2061955,2062097..2062099)) /locus_tag="Acear_1951" /note="Active Sites [active]" /db_xref="CDD:30168" gene complement(2062731..2063657) /locus_tag="Acear_1952" /db_xref="GeneID:9514011" CDS complement(2062731..2063657) /locus_tag="Acear_1952" /note="COGs: COG1053 succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR015939:IPR000103; KEGG: pth:PTH_0239 adenylylsulfate reductase subunit alpha; SPTR: A8SQY3 Putative uncharacterized protein; PFAM: FAD binding domain" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase/fumarate reductase flavoprotein subunit" /protein_id="YP_003828515.1" /db_xref="GI:302392695" /db_xref="GeneID:9514011" /translation="MLLGNYVSKGDRSIKINGEHIKPIIAEAVERSGVNVLNRVNITN YIVVDGKVRGAFGFSVRENKFYLIQAKAVIVATGGASGIYRPNNPGQARHKMWYPPFN AGAGYAMGIRAGRGPCYLDITHLSDEEGQRLKSSFLNMSPDIILKWADEEIEPQEEPI EIYGTEPYIVGGHSQSGYWIDVDRKTTLDGLYAAGDVAGGAPKKYATGCMVEGEIAGL SALEYIEGVDFAELSQDLITKEFRRVWAPLENEGGFKPQDLEERLQKIMDEYAGGLST DYRIYEEKLLQARQLLARFKQDLSDAKTENKH" misc_feature complement(<2063316..2063648) /locus_tag="Acear_1952" /note="adenylylsulfate reductase subunit alpha; Validated; Region: PRK06854" /db_xref="CDD:180733" misc_feature complement(2062734..>2063327) /locus_tag="Acear_1952" /note="adenylylsulfate reductase subunit alpha; Validated; Region: PRK06854" /db_xref="CDD:180733" gene complement(2063792..2064052) /locus_tag="Acear_1953" /db_xref="GeneID:9514012" CDS complement(2063792..2064052) /locus_tag="Acear_1953" /note="InterPro IPR001455; KEGG: gur:Gura_3940 redox protein regulator of disulfide bond formation-like protein; PFAM: SirA family protein; SPTR: A5G8G8 Redox protein regulator of disulfide bond formation-like protein; PFAM: SirA-like protein" /codon_start=1 /transl_table=11 /product="SirA family protein" /protein_id="YP_003828516.1" /db_xref="GI:302392696" /db_xref="GeneID:9514012" /translation="MLNLLIDKEENGDIEVIDLRGVECPMNFVKAKVAMAPLDEGKVL EIYLDQGEPIANVPDSLASEGHEILDQHKTAEGHYVLRVKKN" misc_feature complement(2063798..2064007) /locus_tag="Acear_1953" /note="SirA, YedF, and YeeD. Two-layered alpha/beta sandwich domain. SirA (also known as UvrY, and YhhP) belongs to a family of bacterial two-component response regulators that controls secondary metabolism and virulence. The other member of this two-...; Region: SirA_YedF_YeeD; cd00291" /db_xref="CDD:48205" misc_feature complement(order(2063966..2063968,2063972..2063983, 2063990..2063992,2063999..2064004)) /locus_tag="Acear_1953" /note="CPxP motif; other site" /db_xref="CDD:48205" gene complement(2064066..2066336) /locus_tag="Acear_1954" /db_xref="GeneID:9514013" CDS complement(2064066..2066336) /locus_tag="Acear_1954" /note="COGs: COG2217 Cation transport ATPase; InterProIPR006403:IPR006416:IPR001757:IPR018303:IPR 017969:IPR006121:IPR008250:IPR005834:IPR001366; KEGG: hor:Hore_04850 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; haloacid dehalogenase; SPTR: B8D216 Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC" /codon_start=1 /transl_table=11 /product="ATPase P" /protein_id="YP_003828517.1" /db_xref="GI:302392697" /db_xref="GeneID:9514013" /translation="MEQAQQLERSTLKIADMTCASCAQRVESALDNTEGVIDATVNFA AEKATVEFNPAQVSDYDLKQIVEDTGYEVVEEEKTEVEEQDEDQQKIAKARSKMLWSW GLTIPIILWMIPEMFLGIAWPTETVYHLGMIALATPILLLVGRKTYYTAYKAISHGSA NMDVLIAMGTGAAFITGPASFFTPLADYAGVAGMIMTFHLTGRYIETKAKGRASQAIK KLLELGAKTATVVREGEEVEVPVDEVQVGDIMVIKPGEKVPTDGEIIEGESAIDESMA TGESMPVKKTVGDEVIGATINQRGLIKVKATKVGKDTFLSQVIKMVEEAQGTKVPIQE FADRVTSIFVPTVLIIAAVTFGLWLLFPETLREVTTWAAAYLPWVNPNLGLITGAIFA TIAVLVIACPCALGLATPTALMVGTGMGAENGVLIRKGEAIQTLKEVHTIVFDKTGTI TEGHPAVTDLVPSEGFSEAELLQLAASVEAGSEHPLGEAIVRRAQEDDLTIDDISGFE AITGKGVQAQVGDSQVFVGSRRLMDEQDIDVSPVEDRMKTLEEEAKTAMLIGVDNQLA GIIAVADPLKEDSKQAIAELRDLGLETAMITGDNERTAKAIAQEVGIDHVVAEVLPDG KVDEIMKLQDEFGTVAMVGDGINDAPALTQANVGIAIGTGTDIAIESSDVTLVRGNLS SVITAIKLSRATFRKIKQNLFWAFIYNTIAIPVAILGLLHPIIAEAAMATSSISVVTN ANLLRRVDVQPRYLEK" misc_feature complement(2064099..2066318) /locus_tag="Acear_1954" /note="Cation transport ATPase [Inorganic ion transport and metabolism]; Region: ZntA; COG2217" /db_xref="CDD:32399" misc_feature complement(2066124..2066306) /locus_tag="Acear_1954" /note="Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain...; Region: HMA; cd00371" /db_xref="CDD:29471" misc_feature complement(order(2066271..2066273,2066280..2066288)) /locus_tag="Acear_1954" /note="metal-binding site [ion binding]" /db_xref="CDD:29471" misc_feature complement(2065032..2065757) /locus_tag="Acear_1954" /note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122" /db_xref="CDD:189402" misc_feature complement(2064381..2064650) /locus_tag="Acear_1954" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cl11391" /db_xref="CDD:197437" gene complement(2066591..2066695) /locus_tag="Acear_1955" /db_xref="GeneID:9514014" CDS complement(2066591..2066695) /locus_tag="Acear_1955" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828518.1" /db_xref="GI:302392698" /db_xref="GeneID:9514014" /translation="MNQILLDPTKEISTIYHISAIPTPYFIGPAGKIL" gene complement(2066723..2067403) /locus_tag="Acear_1956" /db_xref="GeneID:9514015" CDS complement(2066723..2067403) /locus_tag="Acear_1956" /note="COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: aoe:Clos_2717 cytochrome c biogenesis protein transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: A8MKB6 Cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome C biogenesis protein transmembrane region" /codon_start=1 /transl_table=11 /product="cytochrome c biogenesis protein transmembrane region" /protein_id="YP_003828519.1" /db_xref="GI:302392699" /db_xref="GeneID:9514015" /translation="MQEVSIIVALLAGITSFVSPCVLPLVPAYVSYITGSAAQKGRLF TLVRAIGFVIGFSIIFILMGASASYLGQLFARYQSIFTKISGILIIVFGLQMVGILKF DLLYKEVRFKGPQQATNWFSSILMGMAFAAGWTPCVGTVLASILLYAGSSTTVVTGVL LLTVYSLGLGIPFILTAVFINKFTSLSNKINKYLPLISKVSGVVMIIFGILLYLNQIQ KLSQYFYW" misc_feature complement(2066768..2067394) /locus_tag="Acear_1956" /note="Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]; Region: CcdA; COG0785" /db_xref="CDD:31128" misc_feature complement(2066762..2067379) /locus_tag="Acear_1956" /note="Cytochrome C biogenesis protein transmembrane region; Region: DsbD; cl00515" /db_xref="CDD:153822" gene complement(2067565..2067708) /locus_tag="Acear_1957" /db_xref="GeneID:9514016" CDS complement(2067565..2067708) /locus_tag="Acear_1957" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828520.1" /db_xref="GI:302392700" /db_xref="GeneID:9514016" /translation="MECDTDKAVRFCPQCRYEVTDKEVLRCPRCNKILLKKCSECNKC SFT" misc_feature complement(<2067619..>2067696) /locus_tag="Acear_1957" /note="integral membrane protein, PqiA family; Region: pqiA_fam; TIGR00155" /db_xref="CDD:161734" gene complement(2067758..2069596) /locus_tag="Acear_1958" /db_xref="GeneID:9514017" CDS complement(2067758..2069596) /locus_tag="Acear_1958" /note="COGs: COG0370 Fe2+ transport system protein B; InterProIPR005225:IPR003373:IPR002917:IPR011642:IPR 011640:IPR006073; KEGG: hor:Hore_13350 ferrous iron transport protein FeoB; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; ferrous iron transport B domain protein; SPTR: B8CXR6 ferrous iron transport protein FeoB; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: ferrous iron transport protein B; ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain" /codon_start=1 /transl_table=11 /product="ferrous iron transport protein B" /protein_id="YP_003828521.1" /db_xref="GI:302392701" /db_xref="GeneID:9514017" /translation="MDCCDITHQIDIPEKAQKVVLAGNPNVGKSIFFNDFTGVYVDVS NYPGTTLDISSGKYNDKVVLDTPGVYGVSSFNDEERVARDVILSADVVVNIVDAVHLE RDLFLTQQIIDMGIPVVIALNMMDEAQENGLDIDVDKLSRELGVPVIPTVAPEGKGLE EVKRVIDTAQKGEVSLTEEVEADLNEMELNRREGLLVLEGDVNVANRNNLEPTDKKEE IYRQRRERVNEITDKVLSQATEDTNFKVKLGRWMVRPITGIPMLLAVLYGLYEFIGVF VAQTIVDFTEGAVFAETYEPFIKGIVGNLVAIDSLLGKLLVGQFGILTMAVTYTFGLL LPLVIGFYLFLSLLEDSGYLPRVAVLVDRVLTSLGMNGRAIIPMLLGFGCVTMATITT RLLGSKRERIIAVFLLGLAIPCSAQLGVIVGLIAPLGAKYFMIYVATIAVVYILSGTF LNRVMPGKSTDLLIDLPPLRWPKLSNILRKTYIKSKSFIKEAGPIFVIGAAVVTVMQN FGILTAIQELVAPITVGWLELPKEAATAFIMGIVRRDFGAAGLTDLAMTPVQTIVSLI TITLFVPCIAAMMIMIKERNWKESLAIWFGSWITAFVVGGIVAKIL" misc_feature complement(2067761..2069554) /locus_tag="Acear_1958" /note="Fe2+ transport system protein B [Inorganic ion transport and metabolism]; Region: FeoB; COG0370" /db_xref="CDD:30719" misc_feature complement(2069081..2069536) /locus_tag="Acear_1958" /note="Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this...; Region: FeoB; cd01879" /db_xref="CDD:133280" misc_feature complement(2069507..2069530) /locus_tag="Acear_1958" /note="G1 box; other site" /db_xref="CDD:133280" misc_feature complement(order(2069135..2069143,2069219..2069221, 2069225..2069230,2069504..2069515,2069519..2069521)) /locus_tag="Acear_1958" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133280" misc_feature complement(2069438..2069452) /locus_tag="Acear_1958" /note="Switch I region; other site" /db_xref="CDD:133280" misc_feature complement(2069447..2069449) /locus_tag="Acear_1958" /note="G2 box; other site" /db_xref="CDD:133280" misc_feature complement(2069393..2069404) /locus_tag="Acear_1958" /note="G3 box; other site" /db_xref="CDD:133280" misc_feature complement(order(2069330..2069332,2069339..2069395)) /locus_tag="Acear_1958" /note="Switch II region; other site" /db_xref="CDD:133280" misc_feature complement(2069219..2069230) /locus_tag="Acear_1958" /note="G4 box; other site" /db_xref="CDD:133280" misc_feature complement(2069135..2069143) /locus_tag="Acear_1958" /note="G5 box; other site" /db_xref="CDD:133280" misc_feature complement(2068316..2068597) /locus_tag="Acear_1958" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" misc_feature complement(2068145..2068300) /locus_tag="Acear_1958" /note="Ferrous iron transport protein B C terminus; Region: FeoB_C; pfam07664" /db_xref="CDD:191804" misc_feature complement(2067845..2068132) /locus_tag="Acear_1958" /note="Nucleoside recognition; Region: Gate; cl00486" /db_xref="CDD:186029" gene complement(2069599..2069832) /locus_tag="Acear_1959" /db_xref="GeneID:9514018" CDS complement(2069599..2069832) /locus_tag="Acear_1959" /note="InterPro IPR007167; KEGG: hor:Hore_13360 ferrous iron transport protein FeoA; PFAM: FeoA family protein; SPTR: B8CXR7 ferrous iron transport protein FeoA; PFAM: FeoA domain" /codon_start=1 /transl_table=11 /product="FeoA family protein" /protein_id="YP_003828522.1" /db_xref="GI:302392702" /db_xref="GeneID:9514018" /translation="MTLADVKRGDEFQITTIPEENVRAQALRFGISEGSEVSCAEKVP GGPVIVARNLQEIAVGRNLAEQIAVELQGREDR" misc_feature complement(2069620..2069832) /locus_tag="Acear_1959" /note="FeoA domain; Region: FeoA; cl00838" /db_xref="CDD:193951" gene complement(2070069..2071154) /locus_tag="Acear_1960" /db_xref="GeneID:9514019" CDS complement(2070069..2071154) /locus_tag="Acear_1960" /EC_number="2.1.1.61" /note="COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR004506:IPR018318:IPR014729; KEGG: hor:Hore_08900 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like; SPTR: B8CWH7 tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase" /codon_start=1 /transl_table=11 /product="tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase" /protein_id="YP_003828523.1" /db_xref="GI:302392703" /db_xref="GeneID:9514019" /translation="MLGLDQNRVVVAMSGGVDSSLAAAILKKEGYEVIGITMKIWPSE ETPVDNENGCCSLSAVNDARRVAYKLDIPFYVINFEDLFKRTVIQNFKNEYAQARTPN PCVVCNKVIKFNAFLNKAKELGAYYMATGHYAKIIQNEDGRYLLKKSAAPDKDQTYML YNLTQEQLKHTIFPLAEYTKQQTRELAKDYDLKVYDKPESQEICFIPDDDYRRFLQEN HPEIIEPGPILDVEGNKLGEHKGLPFYTIGQRRGLGLENNKKLYVVDMDPERNALIVG DNEDVFAKELIVEEINWISIEKLTEPKEVQAKIRYNSPAAEATIYPVEENVAKVVFAE PQRAITPGQSAVFYNQNIVVGGGVIKE" misc_feature complement(2070078..2071133) /locus_tag="Acear_1960" /note="tRNA methyl transferase; Region: tRNA_Me_trans; pfam03054" /db_xref="CDD:145938" misc_feature complement(2070078..2071133) /locus_tag="Acear_1960" /note="tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble position of some tRNAs...; Region: tRNA_Me_trans; cd01998" /db_xref="CDD:30185" misc_feature complement(order(2071038..2071040,2071044..2071046, 2071098..2071109,2071113..2071121)) /locus_tag="Acear_1960" /note="Ligand Binding Site [chemical binding]; other site" /db_xref="CDD:30185" gene complement(2071175..2071624) /locus_tag="Acear_1961" /db_xref="GeneID:9514020" CDS complement(2071175..2071624) /locus_tag="Acear_1961" /note="COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: mta:Moth_1653 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: Q2RHY4 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: transcriptional regulator; TIGRFAM: rrf2 family protein ( transcriptional regulator)" /codon_start=1 /transl_table=11 /product="BadM/Rrf2 family transcriptional regulator" /protein_id="YP_003828524.1" /db_xref="GI:302392704" /db_xref="GeneID:9514020" /translation="MQLSTKGRYGVRAMFDLALQQKEGPIPLKEIAERQKISDNYLEQ LIAVLKNNRLVESVRGAYGGYLLAKPPEEISIGDIIRALEGPIDLADCVGGRSCEFED NCIVELIWQKVKKEIDDILDSITLEDLLQEAANAQQDDKQHGYMYYI" misc_feature complement(2071220..2071624) /locus_tag="Acear_1961" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cl00088" /db_xref="CDD:193654" misc_feature complement(2071235..2071624) /locus_tag="Acear_1961" /note="Rrf2 family protein; Region: rrf2_super; TIGR00738" /db_xref="CDD:129821" gene complement(2071639..2072565) /locus_tag="Acear_1962" /db_xref="GeneID:9514021" CDS complement(2071639..2072565) /locus_tag="Acear_1962" /EC_number="2.5.1.47" /note="COGs: COG0031 cysteine synthase; InterPro IPR005856:IPR005859:IPR001926; KEGG: hor:Hore_23060 cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: B8D199 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases" /codon_start=1 /transl_table=11 /product="cysteine synthase" /protein_id="YP_003828525.1" /db_xref="GI:302392705" /db_xref="GeneID:9514021" /translation="MEINDNITELIGQTPLVKLNRVVPRGAAEVVVKLDSFNPGSSIK DRIALSMIKTAEEEGKLKQGGTIVEPTSGNTGIGLALVGTAKGYEVVLTMPDTMSVER RKLLSALGANLVLTPGQEGMPGAIEKAEELAAENDDYFMPQQFKNSANPNIHRQTTAQ EILQATEGEIDAFVAGVGTGGTITGIGEVLKSKVDEVEIIAVEPADSPVLNGGQPGPH SIQGIGAGFVPEVLNTEILDEVVTIKDKDAEITARKLAAEEGIFVGVSSGAAVAVAIE VAKRLGPDNRVVAIAPDTGERYLSTTLFEDEE" misc_feature complement(2071654..2072547) /locus_tag="Acear_1962" /note="cysteine synthases; Region: cysKM; TIGR01136" /db_xref="CDD:162219" misc_feature complement(2071666..2072532) /locus_tag="Acear_1962" /note="CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine...; Region: CBS_like; cd01561" /db_xref="CDD:107204" misc_feature complement(order(2071669..2071671,2071678..2071680, 2071708..2071710,2071780..2071788,2071792..2071800, 2072071..2072076,2072239..2072244,2072251..2072256, 2072263..2072268,2072314..2072316,2072323..2072325, 2072449..2072451,2072455..2072457,2072473..2072475, 2072512..2072520)) /locus_tag="Acear_1962" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:107204" misc_feature complement(order(2071687..2071692,2071768..2071770, 2071900..2071902,2072020..2072037,2072344..2072346, 2072434..2072436)) /locus_tag="Acear_1962" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:107204" misc_feature complement(2072434..2072436) /locus_tag="Acear_1962" /note="catalytic residue [active]" /db_xref="CDD:107204" gene complement(2072661..2075258) /locus_tag="Acear_1963" /db_xref="GeneID:9514022" CDS complement(2072661..2075258) /locus_tag="Acear_1963" /EC_number="1.2.1.10" /EC_number="1.1.1.1" /note="COGs: COG1454 alcohol dehydrogenase class IV; InterProIPR018211:IPR015590:IPR001670:IPR016161:IPR 016162:IPR012079; KEGG: tex:Teth514_0627 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; aldehyde Dehydrogenase; SPTR: C6PBR3 Iron-containing alcohol dehydrogenase; PFAM: aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase AdhE ;acetaldehyde dehydrogenase" /protein_id="YP_003828526.1" /db_xref="GI:302392706" /db_xref="GeneID:9514022" /translation="MTQQIVKIPRQPQEQIFTLIDKALEAASQLDVMSQKELDRIIKE MALAGVDNHIRLAELAVEETEMGVYEDKITKNLFATENVYHDIKDKKTKGVINQDSTT GIIEVAEPVGVIAALIPATNPTSTALFKALIALKAGNPVIFSFHPRAFESSKETARIM RNAAIEAGAPEGCIQWIEPSSEEMTDKLMTHSDVSLVLATGGGSMVQAAYSSGTPAIG VGPGNVPVYIEESADLEQAVHDITTSKTFDNGTVCASEQTLLVDKEVSSRVKELFVSY HTYILDEAERKRLEKVAIDSETKAMNPKVVGQSATKIAEMAGIEVPDDTVLLLVPLQG IGAGYPLSREKLSPILGVQEVADYREGIGKISEVVNFDGLGHTAVVHSNCQQVIDEFR TKVKTGRLLVNNPATFGAVGDIYNHLPPSMTLGCGTFGGNSTTANVTVDQLYNVKRLT DRKVEREWIKLPPEIYFNPGSLSQLSNLEGEKAVIITDKVMEELGYVQQTAEYLEQAE IDYQVFTGVEPDPSVTTVMEGKEVLEAYGADIIIALGGGSPIDAAKGMWLFYEYPETD FKDLKLRFMDIKKRVYDFPELGDKAKFVAIPTTSGSGSEITSFTVITDKENQVKYPLV SYELTPDMAIVDSELAMTLPPKMTAYTGLDVLTHGIEAYVSVMASDYTDPLALQAIKL VFEYLPRAYKNGTEDKEAREKMHHAACIAGMSFTNAFLGINHSLAHVLGSKFEISHGL ANALLLPHVIKYNAQSPTKFAHYPNYSYHQAGERYNELAKELGLKADSREKGVNNLIQ EIKNLMITLDLPLSIAELEIDKQEFKSKIGAMAKIAYSDQATIANPRKPLVSELEDIY NKAYDGLKA" misc_feature complement(2072679..2075249) /locus_tag="Acear_1963" /note="bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional; Region: PRK13805" /db_xref="CDD:184338" misc_feature complement(2073903..2075207) /locus_tag="Acear_1963" /note="Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like; Region: ALDH_F20_ACDH; cd07122" /db_xref="CDD:143440" misc_feature complement(2074500..2074502) /locus_tag="Acear_1963" /note="putative catalytic cysteine [active]" /db_xref="CDD:143440" misc_feature complement(2072691..2073875) /locus_tag="Acear_1963" /note="C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD); Region: AAD_C; cd08178" /db_xref="CDD:173937" misc_feature complement(order(2073045..2073047,2073075..2073077, 2073087..2073089,2073285..2073287,2073297..2073299, 2073318..2073320,2073342..2073344,2073396..2073401, 2073456..2073458,2073462..2073467,2073597..2073599, 2073606..2073608,2073615..2073623,2073795..2073797)) /locus_tag="Acear_1963" /note="putative active site [active]" /db_xref="CDD:173937" misc_feature complement(order(2073045..2073047,2073087..2073089, 2073285..2073287,2073297..2073299)) /locus_tag="Acear_1963" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:173937" gene 2075378..2075698 /locus_tag="Acear_1964" /db_xref="GeneID:9514023" CDS 2075378..2075698 /locus_tag="Acear_1964" /note="KEGG: dhd:Dhaf_3389 hypothetical protein; SPTR: C0GIN8 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828527.1" /db_xref="GI:302392707" /db_xref="GeneID:9514023" /translation="MILISDLQDLLTEIDEKNADGFCFEVRHKILEIPRNLYLETLSD HKQPLSEEAVQHVVEEYLDWKDEQGLPGMIRINDNQEENQIELDAAVRYLVSCEENSC DRNI" gene complement(2075749..2076042) /locus_tag="Acear_1965" /db_xref="GeneID:9514024" CDS complement(2075749..2076042) /locus_tag="Acear_1965" /note="COGs: COG2440 ferredoxin-like protein; InterPro IPR017896:IPR001450; KEGG: hor:Hore_00130 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8CZP6 4Fe-4S ferredoxin iron-sulfur binding domain protein" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003828528.1" /db_xref="GI:302392708" /db_xref="GeneID:9514024" /translation="MSNFSKDQKTPLDSIPIKADDTSHIQIKNREVCLEECENKPCTY YCPTRVFSWRGEENRIEIDYTRCVECLACPHGCPHNNIAWSFPQGGYGVNYQN" misc_feature complement(2075755..2075991) /locus_tag="Acear_1965" /note="Ferredoxin-like protein [Energy production and conversion]; Region: FixX; COG2440" /db_xref="CDD:32561" gene complement(2076042..2077352) /locus_tag="Acear_1966" /db_xref="GeneID:9514025" CDS complement(2076042..2077352) /locus_tag="Acear_1966" /note="COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR013027:IPR006076; KEGG: hor:Hore_00140 electron-transferring-flavoprotein dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; SPTR: B8CZP7 electron-transferring-flavoprotein dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase" /codon_start=1 /transl_table=11 /product="FAD-dependent pyridine nucleotide-disulfide oxidoreductase" /protein_id="YP_003828529.1" /db_xref="GI:302392709" /db_xref="GeneID:9514025" /translation="MGHDRYDAVVVGAGPAGSAAAMSMAQNNLSVALIERGEQPGSKN MFGGSLSRKPTAEAIPEFWKEAPLERAIVNEELWLMDKTSAVKVGFTGLEFNKSPYNK FSVIRSKFDPWFADQAVKAGAQLMTSTLVEELVYEKTGLLNKKVAGVELDSGEIIHAD VVLLAEGASAALTQEAGLREEIKPSSLFLYVKEELGLPAEKIESRFNLEPGEGANIGM LGYPGSGIIGKGGIWTNQESISVVVGGYLNQIINKGVSPYQLLSRFKEHSLISRLLAG AEPIAYKAHTIPKGGYNEIPQLYGDGVLVAGDAAMMVTGRRGADLAILTGLYAAEVIA QARAAQDYSAEILKGYEKRIMNSFFMENIKEHKDRKEYYQNYSDSDFLLTKAANDAAY RFFKVGLQSKKDKMKTIRKDLFNMQPTDKLVSDLYHGLKNWGDF" misc_feature complement(2076252..2077352) /locus_tag="Acear_1966" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(2076054..2077277) /locus_tag="Acear_1966" /note="Dehydrogenases (flavoproteins) [Energy production and conversion]; Region: FixC; COG0644" /db_xref="CDD:30989" gene complement(2077421..2077582) /locus_tag="Acear_1967" /db_xref="GeneID:9514026" CDS complement(2077421..2077582) /locus_tag="Acear_1967" /note="InterPro IPR011437; KEGG: ate:Athe_2063 protein of unknown function DUF1540; PFAM: protein of unknown function DUF1540; SPTR: B9MLF0 Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1540)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828530.1" /db_xref="GI:302392710" /db_xref="GeneID:9514026" /translation="MDKNESIKCRVSNCTHWDSQYCTASNIEVDVDGGGTNAPNAEGT NCHTFEPRS" misc_feature complement(2077436..2077564) /locus_tag="Acear_1967" /note="Domain of Unknown Function (DUF1540); Region: DUF1540; pfam07561" /db_xref="CDD:191785" gene complement(2077974..2078801) /locus_tag="Acear_1968" /db_xref="GeneID:9514027" CDS complement(2077974..2078801) /locus_tag="Acear_1968" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: hwa:HQ1713A IS1341-type transposase; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003828531.1" /db_xref="GI:302392711" /db_xref="GeneID:9514027" /translation="MPNELLSSNRDVLNSTTRIEFKPLSDDTYKVILTYKVDTPTIKE DNGNYLSIDLGINNLMTCYSNQNQESFIIDGGQYLAINRYFDKQIKHYQSILNGQGKK TSKRIQNLYKKRRKQLFHLIHSATKKVVNYCIENNISRVIVGDIKNIRDDANLGKQNN QKLHKLPFDIIYHQLEYKLNLQGITLIKKSEKYTSQCSPYSKKVTKKYGDKSNRIKRG LYVDKNNNQAFNADSVGSFNILRKYLQQRRKGKDITLQVKGLSNPVKYSWNDHQFAA" misc_feature complement(2078352..>2078726) /locus_tag="Acear_1968" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature complement(2078217..2078462) /locus_tag="Acear_1968" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature complement(2078076..2078300) /locus_tag="Acear_1968" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene complement(2078013..2079211) /locus_tag="Acear_1969" /pseudo /db_xref="GeneID:9514028" gene 2079608..2081293 /locus_tag="Acear_1970" /db_xref="GeneID:9514029" CDS 2079608..2081293 /locus_tag="Acear_1970" /note="COGs: COG1053 succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003953:IPR015939:IPR013027; KEGG: pth:PTH_0239 adenylylsulfate reductase subunit alpha; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: A5D5R5 succinate dehydrogenase/fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: adenosine phosphosulphate reductase, alpha subunit" /codon_start=1 /transl_table=11 /product="fumarate reductase/succinate dehydrogenase flavoprotein domain protein" /protein_id="YP_003828532.1" /db_xref="GI:302392712" /db_xref="GeneID:9514029" /translation="MSKMEVINLKTDILIIGGGAAGCYAGIMGKKYNEDIDILIVEKA QIERSGCLAAGISALNAYLNPDQTPESFLDYIKEDSEGLVRDDLIYTIAKGVNEAAHN LEDWGVPFLKDEAGNYLTKGSRSIRINGEQIKPILAKKVKESGVRVLNRINVTNYIVH NGQVRGAFGFGVRNNKFYVLQAKAVICATGGAAGIYRPNNPGQARHKIWYCPFNTGAG YAMGIRAGAEMTTFEMRFIALRAKDVISPTGTLAQRFDAKQVNVLGEEYQKKYKKNST PFRLYATVQENQKGKGPCFLDLTHLNKEESQRLKKSYLNMSPDILLKWADEDTEPHEQ QVEIHGTEPYIVGGHSQSGYWIDKNRQTTLQGLYAAGDVAGGAPKKYATGCMVEGKIA VLNALEYVSKVETFEIDNGLITQELNRLVSPLKKEAGFPAPALEKRLQKIMDEYAGGL STNYQLQEEKLLTARRLLHKLNQDLTKGQANNKHQLMKLQEVIDKVKVSQVLVEHLLY RKETRWRGYQERVDYPDKDDENWFKFVNSIYNNKKDKIEIIERKHKEIDPNDS" misc_feature 2079608..2081230 /locus_tag="Acear_1970" /note="adenylylsulfate reductase subunit alpha; Validated; Region: PRK06854" /db_xref="CDD:180733" misc_feature 2079704..2080729 /locus_tag="Acear_1970" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature 2080916..>2081206 /locus_tag="Acear_1970" /note="domain; Region: Succ_DH_flav_C; pfam02910" /db_xref="CDD:190472" gene 2081283..2081585 /locus_tag="Acear_1971" /db_xref="GeneID:9514030" CDS 2081283..2081585 /locus_tag="Acear_1971" /note="InterPro IPR017900:IPR017896:IPR001450; KEGG: pth:PTH_0240 ferredoxin; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A5D5R6 ferredoxin" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003828533.1" /db_xref="GI:302392713" /db_xref="GeneID:9514030" /translation="MTVKIDKELCDECKECIRICPGNLLYQAQSGAIMIRNKKNCWDC GACVKKCPQEAIEMYLPVEIGGRGSSLKASQKENKLIWKLKKFDGSKKQFIIKNKT" misc_feature 2081283..2081480 /locus_tag="Acear_1971" /note="Ferredoxin [Energy production and conversion]; Region: COG1146" /db_xref="CDD:31341" misc_feature <2081289..2081456 /locus_tag="Acear_1971" /note="RPB11 and RPB3 subunits of RNA polymerase; Region: RNAP_RPB11_RPB3; cl11409" /db_xref="CDD:196219" gene complement(2081648..2082088) /locus_tag="Acear_1972" /db_xref="GeneID:9514031" CDS complement(2081648..2082088) /locus_tag="Acear_1972" /note="InterPro IPR013838:IPR005302:IPR011037:IPR015808; KEGG: tpd:Teth39_0863 MOSC domain-containing protein; PFAM: MOSC domain containing protein; SPTR: C6JM67 Mosc domain-containing protein; PFAM: MOSC domain" /codon_start=1 /transl_table=11 /product="MOSC domain containing protein" /protein_id="YP_003828534.1" /db_xref="GI:302392714" /db_xref="GeneID:9514031" /translation="MREIIQTGKVVAICCGRERREAKEVTDEGYIKTDYGLEGDVHAG KGERQISLLASEESKELMEKYNLEYGDFEQNIVTEGIEADHLSLGDRLKVGEDIILEV TQIGKEFQDGYEIFHRVMCERGIFTKVLRGGEIKARDQIQVSSS" misc_feature complement(2081660..2081983) /locus_tag="Acear_1972" /note="MOSC domain; Region: MOSC; pfam03473" /db_xref="CDD:146227" gene complement(2082267..2082386) /locus_tag="Acear_1973" /db_xref="GeneID:9514032" CDS complement(2082267..2082386) /locus_tag="Acear_1973" /note="PFAM: Helix-turn-helix domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828535.1" /db_xref="GI:302392715" /db_xref="GeneID:9514032" /translation="MTKKFIPIKRVYKCRIYPNQEQQEIIKQTIGAARWVPIC" misc_feature complement(<2082279..2082362) /locus_tag="Acear_1973" /note="Helix-turn-helix domain; Region: HTH_OrfB_IS605; pfam12323" /db_xref="CDD:192986" gene complement(2082403..2082807) /locus_tag="Acear_1974" /db_xref="GeneID:9514033" CDS complement(2082403..2082807) /locus_tag="Acear_1974" /note="COGs: COG1943 transposase and inactivated derivatives; InterPro IPR002686; KEGG: drm:Dred_0876 transposase IS200-family protein; PFAM: transposase IS200-family protein; SPTR: C0EWM1 Putative uncharacterized protein; PFAM: transposase IS200 like" /codon_start=1 /transl_table=11 /product="transposase IS200-family protein" /protein_id="YP_003828536.1" /db_xref="GI:302392716" /db_xref="GeneID:9514033" /translation="MNNLIHARTCVYNVGYHIVFTVKYRQKVLTGKVATRLKEVLHQV AQDKEFIIETMELMPDHVHIFVSTKPTVAPTDIVRTIKSISAIKLFDKHPKLKKFYAR CGSLWSKGYFIDTVGNANIETIKEYIVNQDFQ" misc_feature complement(2082415..2082777) /locus_tag="Acear_1974" /note="Transposase IS200 like; Region: Y1_Tnp; cl00848" /db_xref="CDD:154036" gene 2083059..2083598 /locus_tag="Acear_1975" /db_xref="GeneID:9514034" CDS 2083059..2083598 /locus_tag="Acear_1975" /note="InterPro IPR008254; KEGG: dsa:Desal_0459 hypothetical protein; PFAM: flavodoxin/nitric oxide synthase; SPTR: C6BX46 Putative uncharacterized protein; PFAM: Flavodoxin" /codon_start=1 /transl_table=11 /product="flavodoxin/nitric oxide synthase" /protein_id="YP_003828537.1" /db_xref="GI:302392717" /db_xref="GeneID:9514034" /translation="MEKEALVCYWSRTGNTEQVAETIKEALEENDLNVTYKEVKEMED DDFLDYDWVFLGTPSHHFLPPKPALKTLQSKLNTYSNEGEVKLCAPDRPDKKAAVFCT YSGPHTGIDEAIPVGKYLGQFLEHIGFNVVDEWYVIGEMHMNIPNINTEGRLGNIKGR PNEEDLTRIKNNVEDVLEK" misc_feature <2083062..2083586 /locus_tag="Acear_1975" /note="Uncharacterized flavoproteins [Energy production and conversion]; Region: FpaA; COG0426" /db_xref="CDD:30775" misc_feature 2083071..>2083235 /locus_tag="Acear_1975" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:193819" gene complement(2083654..2084508) /locus_tag="Acear_1976" /db_xref="GeneID:9514035" CDS complement(2083654..2084508) /locus_tag="Acear_1976" /note="COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685:IPR010920:IPR011066:IPR011014; KEGG: hor:Hore_23390 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: B8D1D2 MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel" /codon_start=1 /transl_table=11 /product="MscS Mechanosensitive ion channel" /protein_id="YP_003828538.1" /db_xref="GI:302392718" /db_xref="GeneID:9514035" /translation="MNKFKSLFTSSSDQVITVDLLTSAGIIILQLAGIFILSKILFKF INYLIENIFDEKDGHDSQTIQRNKTLKTILQSALRYLFYFVVVTTSLQVLGIPTASIL AGAGVFGLAIGFGAQNLVEDIITGFFILFENQFGVGDYIRVSEVEGFVQEVGLRTTRI KNFNGDLHIIPNRRIEQVTNLTADLRRVAVDAAIEYEQNIGQAVTVLEDLCQEIKTNY NEIINEGPEVLGVQELAASSVKIRVVAMVEAEESWQFERVMKRKIKDRFDEESISIPY NHLTLVEK" misc_feature complement(2083684..2084277) /locus_tag="Acear_1976" /note="Mechanosensitive ion channel; Region: MS_channel; pfam00924" /db_xref="CDD:144501" gene 2084672..2085109 /locus_tag="Acear_1977" /db_xref="GeneID:9514036" CDS 2084672..2085109 /locus_tag="Acear_1977" /note="COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR015358:IPR009061; KEGG: stl:stu1600 MerR family transcriptional regulator; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; SPTR: A8CPE1 Putative transcriptional regulator, MerR family; PFAM: MerR family regulatory protein; MerR, DNA binding" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="YP_003828539.1" /db_xref="GI:302392719" /db_xref="GeneID:9514036" /translation="MTNSQEIDFFKIGVLSKKAEVSKRTIRYYEELELLTPSKVSEGG FRLYTKNDLQRLMVIKGFKELGFSLDQIKELLHPQPDKNKKEKLEYSKQILKSQLEAT NEQIEKLKKLRQRSQTALEMLAECQSCSKDSCPPQCPNRKAFL" misc_feature 2084699..2085046 /locus_tag="Acear_1977" /note="Predicted transcriptional regulators [Transcription]; Region: SoxR; COG0789" /db_xref="CDD:31132" misc_feature 2084699..2085007 /locus_tag="Acear_1977" /note="Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA; Region: HTH_TipAL-Mta; cd01106" /db_xref="CDD:133381" misc_feature order(2084702..2084710,2084750..2084752,2084801..2084809) /locus_tag="Acear_1977" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133381" misc_feature order(2084843..2084845,2084852..2084854,2084864..2084869, 2084894..2084896,2084933..2084935,2084945..2084947, 2084963..2084965,2084975..2084977,2084984..2084989) /locus_tag="Acear_1977" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133381" gene 2085222..2085374 /locus_tag="Acear_1978" /db_xref="GeneID:9514037" CDS 2085222..2085374 /locus_tag="Acear_1978" /note="KEGG: fno:Fnod_0812 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828540.1" /db_xref="GI:302392720" /db_xref="GeneID:9514037" /translation="MAEMKDRADCPNIEVNEIDCTCTADCDLQGKCCACIQAHRQNDD LPACLA" gene 2085394..2086005 /locus_tag="Acear_1979" /db_xref="GeneID:9514038" CDS 2085394..2086005 /locus_tag="Acear_1979" /note="InterPro IPR012437; KEGG: chy:CHY_1188 hypothetical protein; PFAM: protein of unknown function DUF1638; SPTR: Q3ACV1 Putative uncharacterized protein; PFAM: protein of unknown function (DUF1638)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828541.1" /db_xref="GI:302392721" /db_xref="GeneID:9514038" /translation="MKKSVKKEKGIICCGVLAEELELICQEEGITAEKYYIDPALHVD FDKLRARLIDVLDEVSHKHEELIIIFGNCYPEIDQTITKYNGDRIKAQDCMWALLGDK KTDLDSQGDIFYLTSGYLKHWRDIFASQNGLGWDPIDARQNFGFYDKIILLDTGVREI PEEEILEFFEYTRIPIEPIEIDLTYFKKLVLDKLNHSVICSRV" misc_feature 2085496..>2085864 /locus_tag="Acear_1979" /note="Protein of unknown function (DUF1638); Region: DUF1638; pfam07796" /db_xref="CDD:149066" gene complement(2086614..2086802) /locus_tag="Acear_1980" /db_xref="GeneID:9514039" CDS complement(2086614..2086802) /locus_tag="Acear_1980" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828542.1" /db_xref="GI:302392722" /db_xref="GeneID:9514039" /translation="MKNKESQTSKFNSQMTLGEQSRIITKKGTDVRLPNEISPEMAQM LDGHQSALTVALYKSLAE" gene complement(2086904..2087647) /locus_tag="Acear_1981" /db_xref="GeneID:9514040" CDS complement(2086904..2087647) /locus_tag="Acear_1981" /note="COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR002177:IPR008331:IPR009078:IPR012347; KEGG: nth:Nther_2165 ferritin Dps family protein; PFAM: ferritin Dps family protein; SPTR: A6CL15 Putative starvation induced DNA binding protein; PFAM: ferritin-like domain" /codon_start=1 /transl_table=11 /product="ferritin Dps family protein" /protein_id="YP_003828543.1" /db_xref="GI:302392723" /db_xref="GeneID:9514040" /translation="MAEGEYQTSNQESIEEISTNMSNFEGSFNLDKSGFNSQMPGHTT DHSMILRQQPRTIKKEGAGIGLSDEVRLEMAQMLDDHQSALTVALHQYNKHHWLTEGA ESFFSLHHMLEEHRDKTVDHIDMIGERVARLGCVPTAHPTTQHELSYLKHEVEGRYTM RDFLRNDLEHELKLQEMMRKTIKRAHEIEDYGTVEVLEEILLDREDFGYHIYSVLEDD TLVRGMNHLLDKEHDLINRSTETSENKLQ" misc_feature complement(2086985..2087425) /locus_tag="Acear_1981" /note="Ferritin-like domain; Region: Ferritin; pfam00210" /db_xref="CDD:189451" misc_feature complement(2087003..2087422) /locus_tag="Acear_1981" /note="Ferritin-like superfamily of diiron-containing four-helix-bundle proteins; Region: Ferritin_like; cl00264" /db_xref="CDD:193737" misc_feature complement(order(2087027..2087029,2087036..2087038, 2087135..2087137,2087282..2087284,2087291..2087293, 2087393..2087395)) /locus_tag="Acear_1981" /note="dinuclear metal binding motif [ion binding]; other site" /db_xref="CDD:153097" gene complement(2087804..2089282) /locus_tag="Acear_1982" /db_xref="GeneID:9514041" CDS complement(2087804..2089282) /locus_tag="Acear_1982" /note="COGs: COG0840 methyl-accepting chemotaxis protein; InterPro IPR012827:IPR004089:IPR012312:IPR004090; KEGG: dsa:Desal_0932 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Hemerythrin HHE cation binding domain protein; SMART: chemotaxis sensory transducer; SPTR: C6BZU0 methyl-accepting chemotaxis sensory transducer; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain; methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: hemerythrin-like metal-binding domain" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer" /protein_id="YP_003828544.1" /db_xref="GI:302392724" /db_xref="GeneID:9514041" /translation="MNEKLSALTWKCRLGLITVLLFGIPIINLINSLISNYISNSIMG YLGIFIEIVIIFTLIEFLFREFIIEELNQTLNSVDEFDADLKDKNIIKNIKDEIDDLS IYSQELSASSNEGNVAVKKTNELVEKILANIEDISASAEEVTGFAEEATAQTQQGRDN IDGTINSINEINQVVDETVETMQQLDDNAQQISEIIELITNIADQTNLLALNAAIEAA RAGEEGQGFAVVAEEIRELAEETSSATNNIIDIVETTQNKAAEGLSSIKQVKNKAEEG KVVAEETNQIFFQIEDASQEVAEMIEQTAAAASNLVESSDELSEESETLASIFDVVSD SSDELADMSAEVSRLFNDSEVNTDDVELINWNDSYSIGIDKIDCQHKQLFEQVNKLII ANRENRGQEEMGEIIDFLADYTIQHFSDEEELQQESDYPDYKQHKKIHDNFVQDAVEF KEKFEEGKVDTGDMMKFNRKIAKWLVNHVKGIDQELAKYVRE" misc_feature complement(2088227..2088970) /locus_tag="Acear_1982" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(<2088359..2088778) /locus_tag="Acear_1982" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" misc_feature complement(2087834..2088196) /locus_tag="Acear_1982" /note="Hemerythrin (Hr) is a non-heme diiron oxygen transport protein found in four marine invertebrate phyla including priapulida, brachiopoda, sipunculida, and annelida, as well as in protozoa. Myohemerythrin (Mhr), a hemerythrin homolog, is found in the...; Region: Hemerythrin; cl11605" /db_xref="CDD:196268" misc_feature complement(order(2087912..2087914,2087951..2087953, 2087993..2087995,2087999..2088007,2088017..2088019, 2088023..2088028,2088035..2088052,2088056..2088061, 2088116..2088121,2088128..2088133,2088137..2088142, 2088149..2088154,2088161..2088163,2088173..2088175, 2088182..2088193)) /locus_tag="Acear_1982" /note="octamerization interface [polypeptide binding]; other site" /db_xref="CDD:29622" misc_feature complement(2087813..2088190) /locus_tag="Acear_1982" /note="hemerythrin-like metal-binding domain; Region: hemeryth_dom; TIGR02481" /db_xref="CDD:162878" misc_feature complement(order(2087834..2087836,2087849..2087851, 2087963..2087965,2087975..2087977,2088020..2088022, 2088032..2088034,2088143..2088145)) /locus_tag="Acear_1982" /note="diferric-oxygen binding site [ion binding]; other site" /db_xref="CDD:29622" gene 2089538..2089741 /locus_tag="Acear_1983" /db_xref="GeneID:9514042" CDS 2089538..2089741 /locus_tag="Acear_1983" /note="COGs: COG1278 Cold shock protein; InterProIPR019844:IPR002059:IPR016027:IPR012340:IPR 012156:IPR011129; KEGG: hor:Hore_16470 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B8CYM7 Putative cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain" /codon_start=1 /transl_table=11 /product="cold-shock DNA-binding protein family" /protein_id="YP_003828545.1" /db_xref="GI:302392725" /db_xref="GeneID:9514042" /translation="MILSGTVKWFDSNKGFGFIERPDEDDVFVHYSAIAEDGFKDLDE GAEVEFEVVEGEKGPQAENVVKL" misc_feature 2089550..2089735 /locus_tag="Acear_1983" /note="Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein...; Region: CSP_CDS; cd04458" /db_xref="CDD:88424" misc_feature order(2089562..2089564,2089589..2089591,2089619..2089621, 2089706..2089708) /locus_tag="Acear_1983" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:88424" misc_feature order(2089580..2089600,2089616..2089627) /locus_tag="Acear_1983" /note="RNA-binding motif; other site" /db_xref="CDD:88424" gene 2089976..2090620 /locus_tag="Acear_1984" /db_xref="GeneID:9514043" CDS 2089976..2090620 /locus_tag="Acear_1984" /note="KEGG: hypothetical protein LOC679495; SPTR: Q54ZV8 RNA-binding region RNP-1 domain-containing protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828546.1" /db_xref="GI:302392726" /db_xref="GeneID:9514043" /translation="MVKKKRSRSRNPKNNSSNDKEKKSNTNQTKQQTNQKSETETKKK NSKKKNKSQVKETKTQNNLQRKTSPNNTSTNVSLTSLMKSNLKGVISDLRTFTDNIEQ IINLVNTIEQMGPIIKQLSKIQAQNDGELNLETVLSHTNLDLSNIKSGSTEQNPHNQH EKNESDSRNPKSFNKNSDDTNSHGQKHTDSESDGIDKSELSDLLAEVLSKKLSE" gene complement(2090672..2091883) /locus_tag="Acear_1985" /db_xref="GeneID:9514044" CDS complement(2090672..2091883) /locus_tag="Acear_1985" /note="COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: pjd:Pjdr2_0135 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: C6CSS5 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family" /codon_start=1 /transl_table=11 /product="peptidase S8 and S53 subtilisin kexin sedolisin" /protein_id="YP_003828547.1" /db_xref="GI:302392727" /db_xref="GeneID:9514044" /translation="MSLADPIETLITILILQQITGNNGFDFGSYSRRQKDSSRASNPS RRRNNSKKKNLSDYIIVHDHQLNENELQEKVELQREMGQLKKKLPLINGVACQLEDED HLAEVESMPGVRRVDEDLTLEIKSSSGDFIPWGIEEINASDAWSELKAKVGIIDTGID LNHFDLSPINSGYNPINSAQQPEDQNGHGTHVAGTIAARKNGRGIVGVAPAIKLYPVK AFDKDGSAKMSSLIEALQWSIDNDLQVLNMSFGVDKGNDTLQEAIVKTYEAGITMVAA AGNDGATTVDFPARYPEVIAVGAVNEDKKLADFSNYGSNLDVLAPGVDVQSTWKNGQF NKLDGTSMAAPHVTGITALILGKFDNLTPAKIKEAIKEGAVLLDSIDSAKQGSGLVNA AETIEILKKQN" misc_feature complement(2090768..2091433) /locus_tag="Acear_1985" /note="Peptidase S8 family domain in Subtilisin proteins; Region: Peptidases_S8_Subtilisin_subset; cd07477" /db_xref="CDD:173803" misc_feature complement(order(2090861..2090863,2091047..2091049, 2091134..2091136,2091191..2091193,2091320..2091322, 2091416..2091418)) /locus_tag="Acear_1985" /note="active site" /db_xref="CDD:173803" misc_feature complement(order(2090861..2090863,2091320..2091322, 2091416..2091418)) /locus_tag="Acear_1985" /note="catalytic residues [active]" /db_xref="CDD:173803" gene 2092317..2092460 /locus_tag="Acear_1986" /db_xref="GeneID:9514045" CDS 2092317..2092460 /locus_tag="Acear_1986" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828548.1" /db_xref="GI:302392728" /db_xref="GeneID:9514045" /translation="MQEESFGFESAELERYFGSFFQILIWVFAFIIIFDHFGGGFGGL FNE" gene 2092630..2092740 /locus_tag="Acear_1987" /db_xref="GeneID:9514046" CDS 2092630..2092740 /locus_tag="Acear_1987" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828549.1" /db_xref="GI:302392729" /db_xref="GeneID:9514046" /translation="MPGGFDYFDADPVVILIVILILQQVGKGVFSHHYDY" gene 2092797..2092916 /locus_tag="Acear_1988" /db_xref="GeneID:9514047" CDS 2092797..2092916 /locus_tag="Acear_1988" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828550.1" /db_xref="GI:302392730" /db_xref="GeneID:9514047" /translation="MPGHDHDLCGCGCYIELILVVFLISCLCRGGVFGFFDAD" gene 2093007..2093615 /locus_tag="Acear_1989" /db_xref="GeneID:9514048" CDS 2093007..2093615 /locus_tag="Acear_1989" /note="KEGG: rci:RCIX2497 hypothetical protein; SPTR: Q0W226 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828551.1" /db_xref="GI:302392731" /db_xref="GeneID:9514048" /translation="MSNYNQIKNFYRKRYSSSNKSHKAVGWESEQKQYKRFKALIKNF DQELLKKESIVDFGCGLADLLPWLQKRSLAEKYIGVDIMEEFLKDNRKKFPEFRFIDT GSFLKKPQKYGFIVASGVFTLSWGQNHRKQIKDMIKRLYNKSYHGFSFNMISSFYPKT KKNYYYFNPLKMGEFCTSITERLIIDCSYLPEDFTITLFKNS" misc_feature 2093169..2093432 /locus_tag="Acear_1989" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene complement(2093659..2095074) /locus_tag="Acear_1990" /db_xref="GeneID:9514049" CDS complement(2093659..2095074) /locus_tag="Acear_1990" /note="COGs: COG0069 glutamate synthase domain 2; InterPro IPR002932:IPR013785; KEGG: hor:Hore_17300 glutamate synthase (NADPH) large subunit; PFAM: ferredoxin-dependent glutamate synthase; SPTR: B8CYW0 glutamate synthase (NADPH) large subunit; PFAM: Conserved region in glutamate synthase" /codon_start=1 /transl_table=11 /product="ferredoxin-dependent glutamate synthase" /protein_id="YP_003828552.1" /db_xref="GI:302392732" /db_xref="GeneID:9514049" /translation="MFKKLMNKIMMGMMDNMMDHMMNRMMQEPYTENLFSFITIMKKL SPKAIIEAGMRAESGKPIERPLGSPNVQSEWQKLFLNPVHLFKLPTQDGVQIQTKTTI GPQAENPLKLELPILLAGMSYGGALSLNAKVALARASAMAGTATNSGEAPLIDEEREE ADYFIGQYNRGGWMNQPEQLSRLDAIEIQLGQGAQAAAPMGMSPTQIGEDLRQAKDLE PGEKAVIHTRLSEMKQPSDFFEIVQQLRDEYGVPVGLKFCATHYLEQELEIAVKAGVD YVVIDGAEAGTHGGPTTLQDDVGLPTLYALSRAVKFLEEKGVKDRVSVIASGGLTTPG HFLKALALGADAVYIGSIALMALLQTQMSKALPQEPPPQIPLYLGKFKEDLDVEEAAE HLAKFLKSCLEEMKLTAYSLGKTDLAQLNRKDLVSVDQELAKVLGVDYAGYPQLGADP VSESNINFMEKENEEPQPTTH" misc_feature complement(2093791..2094936) /locus_tag="Acear_1990" /note="Glutamate synthase (GltS) FMN-binding domain. GltS is a complex iron-sulfur flavoprotein that catalyzes the reductive synthesis of L-glutamate from 2-oxoglutarate and L-glutamine via intramolecular channelling of ammonia, a reaction in the plant...; Region: GltS_FMN; cd02808" /db_xref="CDD:73370" misc_feature complement(2093788..2094813) /locus_tag="Acear_1990" /note="isopentenyl-diphosphate delta-isomerase, type 2; Region: IPP_isom_2; TIGR02151" /db_xref="CDD:162733" misc_feature complement(order(2093965..2093967,2093980..2093982, 2093998..2094000,2094022..2094027,2094088..2094090, 2094094..2094096,2094211..2094219,2094307..2094309, 2094430..2094432,2094490..2094492,2094508..2094510, 2094574..2094576,2094625..2094627,2094709..2094720)) /locus_tag="Acear_1990" /note="active site" /db_xref="CDD:73370" misc_feature complement(order(2094022..2094027,2094088..2094090, 2094094..2094096,2094214..2094219,2094307..2094309, 2094508..2094510,2094574..2094576,2094625..2094627, 2094709..2094720)) /locus_tag="Acear_1990" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:73370" misc_feature complement(order(2094211..2094216,2094430..2094432, 2094490..2094492)) /locus_tag="Acear_1990" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73370" misc_feature complement(order(2093965..2093967,2093980..2093982, 2093998..2094000)) /locus_tag="Acear_1990" /note="3Fe-4S cluster binding site [ion binding]; other site" /db_xref="CDD:73370" gene complement(2095113..2095397) /locus_tag="Acear_1991" /db_xref="GeneID:9514050" CDS complement(2095113..2095397) /locus_tag="Acear_1991" /note="InterPro IPR012851; KEGG: pth:PTH_2128 hypothetical protein; PFAM: Coat F domain protein; SPTR: A5D0C0 Putative uncharacterized protein; PFAM: Coat F domain" /codon_start=1 /transl_table=11 /product="Coat F domain protein" /protein_id="YP_003828553.1" /db_xref="GI:302392733" /db_xref="GeneID:9514050" /translation="MNLQDKEMARDMLIMMEQLIQTYTKSELEAANKSLREVFHDLNK DMEVLHTELFNLMQTKGWSEVTTASQQEIESEIISWEQKGLKDDKIEPVE" misc_feature complement(2095212..2095388) /locus_tag="Acear_1991" /note="Coat F domain; Region: Coat_F; cl02368" /db_xref="CDD:194298" gene complement(2095419..2095625) /locus_tag="Acear_1992" /db_xref="GeneID:9514051" CDS complement(2095419..2095625) /locus_tag="Acear_1992" /note="KEGG: nth:Nther_2271 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828554.1" /db_xref="GI:302392734" /db_xref="GeneID:9514051" /translation="MEQLTQMELKKIKNQMNIIALALKKCKNYQQQVQDTELNNIFQE AEQAHQNQLQTLLNQLRNFNGQEH" gene complement(2095786..2097057) /locus_tag="Acear_1993" /db_xref="GeneID:9514052" CDS complement(2095786..2097057) /locus_tag="Acear_1993" /note="COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: mta:Moth_2027 aerolysin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Q2RGW6 Aerolysin. serine peptidase. MEROPS family S08A; PFAM: Subtilase family" /codon_start=1 /transl_table=11 /product="peptidase S8 and S53 subtilisin kexin sedolisin" /protein_id="YP_003828555.1" /db_xref="GI:302392735" /db_xref="GeneID:9514052" /translation="MYSADPIETLITILVLQQITIKVSGLNFGGYSGQRKDGAQQQPG REYNEPDQRKKETSKDSKGDSGDYIIVHDQLLNEDELQEKVELQREQGQVRKKLPLIN GVACRLEDEDHIAEVESIRGVKRVDEDLTLEIKSLDFELESEQSLSGDMVPWGIEAIN TLDAWSDLEVKVGIIDTGIDLNHFDLSPINSGYNTVEPNQRPYDPNGHGTHVAGTISA RKNGKGVVGVAPNIELYPVKAFDKDGSAKMSDLIEALQWSIDNNLGVLNMSFGVDKNN NSLREAIAKVHEAGITMVAAAGNDSTAAVNFPARYPEVIAVGAVNKDKRLADFSNYGT GLDIVAPGVNVQSTWKDGQFNELNGTSMATPHVTGIAALILGKFNNLTPARIKRAIKR GATPLQSIAPVKQGAGLVDAAQTIELLKKQT" misc_feature complement(2095885..2096550) /locus_tag="Acear_1993" /note="Peptidase S8 family domain in Subtilisin proteins; Region: Peptidases_S8_Subtilisin_subset; cd07477" /db_xref="CDD:173803" misc_feature complement(order(2095975..2095977,2096161..2096163, 2096248..2096250,2096305..2096307,2096434..2096436, 2096530..2096532)) /locus_tag="Acear_1993" /note="active site" /db_xref="CDD:173803" misc_feature complement(order(2095975..2095977,2096434..2096436, 2096530..2096532)) /locus_tag="Acear_1993" /note="catalytic residues [active]" /db_xref="CDD:173803" gene 2097551..2097670 /locus_tag="Acear_1994" /db_xref="GeneID:9514053" CDS 2097551..2097670 /locus_tag="Acear_1994" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828556.1" /db_xref="GI:302392736" /db_xref="GeneID:9514053" /translation="MSGYDRDFCGCGCYVELILVVFLISCLCRGGAFGIFDAD" gene 2097807..2097992 /locus_tag="Acear_1995" /db_xref="GeneID:9514054" CDS 2097807..2097992 /locus_tag="Acear_1995" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828557.1" /db_xref="GI:302392737" /db_xref="GeneID:9514054" /translation="MEEPTTEGMDQPTTKEVEDVSTEGFGGFGSFGGFKFEWILILIA VFLLFSGGGFGGLFGEE" gene complement(2098100..2099725) /locus_tag="Acear_1996" /db_xref="GeneID:9514055" CDS complement(2098100..2099725) /locus_tag="Acear_1996" /note="COGs: COG2199 FOG: GGDEF domain; InterProIPR000014:IPR000160:IPR000700:IPR013767:IPR 013655:IPR001610; KEGG: drm:Dred_1552 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: A4J4S7 Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain" /codon_start=1 /transl_table=11 /product="diguanylate cyclase with PAS/PAC sensor" /protein_id="YP_003828558.1" /db_xref="GI:302392738" /db_xref="GeneID:9514055" /translation="MEEEKSRGYFKSIISAVPDLIILFDEEGNYLDVWTSKAEDLVAS KEKLIGKNIDEVLPNEVANSFKKYCSLAIDNDELKTYEYELEFEEGKRYFETHLVSVD AKDANNNEVLAVIRNITERKIVELELERASNKLELTVKGAKLGLWDWNIKTNRIETSK QCSNLLGYEPPNSFTHWKELIHEADKAKISQLIDKLLNGDTSYGKIEYRIKTEDNNYK WLQVIGKVVKWDNKGNPVRVLGILKDIDKRKQVEEELKRQRAYFQQLFNKSPNAIVLL DNEDRVIKVNKSFEQLFEYKQTNIKGEKINNLIIPEKNLGESIEKSLKVKEGEQVSDE VVRETKNSKKIYVEINAFPIKLNQGQIGVYGIYRNISKRKKEEARIKYLSFHDEMTGL YNRRYFENEIERLNNSRKLPISIIIGDMDGLKYINDNYGHKMGDEFIKKTAEAFKAAT RQEDIVARIGGDEFAIILPEADSNTAQKICERIQAKTKWHNKKIDLPEPLRISLGYAV KIDRNQNLDEIFNKADQKMYQNKESRKYSPRDN" misc_feature complement(2099342..2099701) /locus_tag="Acear_1996" /note="PAS domain S-box; Region: sensory_box; TIGR00229" /db_xref="CDD:161776" misc_feature complement(2099372..2099674) /locus_tag="Acear_1996" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cd00130" /db_xref="CDD:29035" misc_feature complement(order(2099456..2099458,2099471..2099473, 2099549..2099560,2099612..2099614,2099624..2099626)) /locus_tag="Acear_1996" /note="putative active site [active]" /db_xref="CDD:29035" misc_feature complement(order(2099432..2099434,2099438..2099440, 2099519..2099524,2099531..2099533,2099555..2099557, 2099567..2099569)) /locus_tag="Acear_1996" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:29035" misc_feature complement(<2098277..>2099491) /locus_tag="Acear_1996" /note="putative diguanylate cyclase; Provisional; Region: PRK09776" /db_xref="CDD:182070" misc_feature complement(<2098790..2098948) /locus_tag="Acear_1996" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl02459" /db_xref="CDD:141436" misc_feature complement(2098121..2098573) /locus_tag="Acear_1996" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(2098340..2098342,2098469..2098471)) /locus_tag="Acear_1996" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(2098337..2098348,2098352..2098354, 2098418..2098420,2098430..2098432,2098442..2098447, 2098454..2098456)) /locus_tag="Acear_1996" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(2098280..2098282,2098364..2098366)) /locus_tag="Acear_1996" /note="I-site; other site" /db_xref="CDD:143635" gene complement(2099904..2101205) /locus_tag="Acear_1997" /db_xref="GeneID:9514056" CDS complement(2099904..2101205) /locus_tag="Acear_1997" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: tex:Teth514_2350 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003828559.1" /db_xref="GI:302392739" /db_xref="GeneID:9514056" /translation="MKLAKYFIHKPNQTQQIVLGCLAYASARLYNIGNYQRKNWSKDS DKEYPDWYKQKKQLKENFWYKNLPSQTAQETLKILADNWDSFYQSKKDYQNNPDKYTG EPNLPNYKPKDSKFNFRYLNNGFKIIDGKLRLSIPKQLKKYLKEEYSITNKFLWIRVP NELLSSNRDVLNSTTRIEFKPLSDDTYKVILTYKVDTPTIKEDNGNYLSIDLGINNLM TCYSNQNQESFIIDGGQYLAINRYFDKKIKHYQSILNGQGKKTSKRIQNLYKKRRKQL FHLIHSATKKVVNYCIENNISRVIVGDIKNIRDDADLGKQNNQKLHKLPFDIIYHQLE YKLNLQGITLIKKSEKYTSQCSPYSKKVTKKYGDKSNRIKRGLYVDKNNNQAFNADSV GSFNILRKYLQQRRKGKDITLQVKGLSNPVKYSWNDHQFAA" misc_feature complement(2100000..2101205) /locus_tag="Acear_1997" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature complement(2100282..2101019) /locus_tag="Acear_1997" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature complement(2100147..2100392) /locus_tag="Acear_1997" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature complement(2100006..2100230) /locus_tag="Acear_1997" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene complement(2101241..2101651) /locus_tag="Acear_1998" /db_xref="GeneID:9514057" CDS complement(2101241..2101651) /locus_tag="Acear_1998" /note="COGs: COG1943 transposase and inactivated derivatives; InterPro IPR002686; KEGG: mma:MM_3037 transposase; PFAM: transposase IS200-family protein; SPTR: Q8PRR7 transposase; PFAM: transposase IS200 like" /codon_start=1 /transl_table=11 /product="transposase IS200-family protein" /protein_id="YP_003828560.1" /db_xref="GI:302392740" /db_xref="GeneID:9514057" /translation="MSNQNNLIHARTCVYNVGYHIVFTVKYRKKILTGKVATRLKEIL HQVAQDKEFIIETMELMPDHLHLFVTAHPKIAPSYIVKMSKGISGRLLLKEFPKLRKQ LYKGHLWNKSYYLETVGNISKDTVKQYIENQKSK" misc_feature complement(2101253..2101612) /locus_tag="Acear_1998" /note="Transposase IS200 like; Region: Y1_Tnp; cl00848" /db_xref="CDD:154036" gene complement(2101908..2102777) /locus_tag="Acear_1999" /db_xref="GeneID:9514058" CDS complement(2101908..2102777) /locus_tag="Acear_1999" /note="COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509:IPR011330; KEGG: glo:Glov_1064 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: B3E663 polysaccharide deacetylase; PFAM: polysaccharide deacetylase" /codon_start=1 /transl_table=11 /product="polysaccharide deacetylase" /protein_id="YP_003828561.1" /db_xref="GI:302392741" /db_xref="GeneID:9514058" /translation="MIDFSRRYWILIAAVSIIMIILTGCSGKEDNLDKKIGQTKLPER LKNKKKEIIAKYKDRTPNEWGENLPGVITRIDTDKKIVVLTLDACGSPGDGYDSKLMD FLIEEEIPATLFINSRWIDDNQETFMELACNPLFTIANHGTRHLPLSVIGKSAYGIKG TTSVEEIVDEVLKNEWKIQNFTEEKPEYFRAGTAYYDEVAVEIVNDLGEKVIGYDTLG DAGATFAKEQVKKAFLSVSPGSIILAHMNRPKSDTAEGIMAAVPELRSKGFQFVKLEN YDNQLISKTEKEE" misc_feature complement(2101953..2102552) /locus_tag="Acear_1999" /note="Polysaccharide deacetylase; Region: Polysacc_deac_1; cl12061" /db_xref="CDD:189245" gene complement(2102949..2104532) /locus_tag="Acear_2000" /db_xref="GeneID:9514059" CDS complement(2102949..2104532) /locus_tag="Acear_2000" /note="COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR000629:IPR014021:IPR001650:IPR014014:IPR 011545:IPR005580:IPR014001; KEGG: hor:Hore_05480 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: B8D278 DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase" /codon_start=1 /transl_table=11 /product="DEAD/DEAH box helicase domain protein" /protein_id="YP_003828562.1" /db_xref="GI:302392742" /db_xref="GeneID:9514059" /translation="MKKKQFEELNLSNEITKAVEDMGFEEATPIQTEAIPHLLAGKDV IGQAQTGTGKTAAFGIPILEKIDPDDKSVQALVLCPTRELAIQVSEEIGRLAKYKRKI KTLPVYGGQSIKRQIKALKKGVQIVIGTPGRTMDHMRRGTLKFDNLKMVILDEADEML NMGFRDDIETILEGVKGKRQTIFFSATMPQSILKLRKKYQTDPEIVKVVHKKLTVPNI EQGYFEVNRRNKLEVLSRLIDIYNPKLSIVFCNTRKQVDELTIQLQARGYFVDGIHGG LNQPQRDRVMNKFKNGTIETLVATDVAARGIDVDDVEAVFNYDIPQDIEYYVHRIGRT GRVGRQGYAFTFVVGKEIYQLKKIEKYAKTKIERKQVPSVSDVEESKMELLLDRVSEI LENENLAQETKLIEELVEEDYVSIDIAAALLKLVMDREEQEGAEKVESFGDTGAEPGM VRLFINIGSKQNVSPGDVVGAIAGETSIPGNVVGLIDIYDKFTFVEVPREYAKEVLKI MKNNQIKGKSIDIELANPK" misc_feature complement(2102979..2104532) /locus_tag="Acear_2000" /note="ATP-dependent RNA helicase DbpA; Provisional; Region: PRK11776" /db_xref="CDD:183308" misc_feature complement(2103912..2104517) /locus_tag="Acear_2000" /note="DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (...; Region: DEADc; cd00268" /db_xref="CDD:28928" misc_feature complement(2104368..2104382) /locus_tag="Acear_2000" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:28928" misc_feature complement(2104062..2104073) /locus_tag="Acear_2000" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:28928" misc_feature complement(2103972..2103980) /locus_tag="Acear_2000" /note="motif III; other site" /db_xref="CDD:28928" misc_feature complement(2103495..2103884) /locus_tag="Acear_2000" /note="Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may...; Region: HELICc; cd00079" /db_xref="CDD:28960" misc_feature complement(order(2103627..2103635,2103708..2103713, 2103771..2103782)) /locus_tag="Acear_2000" /note="nucleotide binding region [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(order(2103525..2103527,2103534..2103536, 2103546..2103548,2103609..2103611)) /locus_tag="Acear_2000" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:28960" misc_feature complement(2102961..2103182) /locus_tag="Acear_2000" /note="DbpA RNA binding domain; Region: DbpA; pfam03880" /db_xref="CDD:146487" gene 2105256..2107985 /locus_tag="Acear_2001" /db_xref="GeneID:9514060" CDS 2105256..2107985 /locus_tag="Acear_2001" /note="COGs: COG0474 Cation transport ATPase; InterProIPR001757:IPR018303:IPR004014:IPR008250:IPR 005834:IPR006068:IPR000695; KEGG: mmz:MmarC7_1737 ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase; SPTR: A6VK17 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC" /codon_start=1 /transl_table=11 /product="ATPase P" /protein_id="YP_003828563.1" /db_xref="GI:302392743" /db_xref="GeneID:9514060" /translation="MNFYQQQVKEVFAELNTSKEGLSNEEAQKRLNKYGENELKTSEG TPKWVLLLSQFKDVLTIMLVVASGMSLLIGNYRDALVMLAIVFINVVIGFFQEFKAEK IMASLKKLVQSPAKVYRDGEITELAQQKLVPGDIISLEEGDKVPADLRIIESYNLRTN DVALTGESMPQEKHSNQINEEASLGDRSNMAYMGTNVASGSATGVVTATGTETEMGKI ASLTQEEERSQSPLQQELSVVANRLAIFALIIGILLFGVSIYRGLDLYYALIYGLGIT VAIVPQALPMQVTVALSQGIAKLSKENAVIKKLSSVETLGSTNIISTDKTGTLTKNEM TVKNLWFDGQEYEVTGLGYKPEGDILNQDGNPVSEEKKDELEIMLDAGTMASNAEIHP PDEDNPSWYPIGDPTEAALITLSTKLGTRSPNEDEENPELHEFSFDSERKRMSSIRKF EDGKFLTMKGALNSVLSITKYIYRDGEKVEITEEDKQRLNELNEKYSNNAMRVLAIAY RQLGPDETDYVIEEIERDVVFLGLVAMVDPPKEGVKEAIEDAHKAHINTYIMTGDHAI TAKAVADEINLGTDKETPVITSQDLQQISDEELKNRMNKNESIIFSRVSPEDKLRIVK NLKAQDQIVAVTGDGVNDAPALKSAHIGVAMGQMGTDVSKETAEMILLDDSYPTLVHA IKEGRKIYNNLKKTVLASLTSNGAELSIVLLGLIGAAVFGWPIPILAIQILSIDLLAE ILPLTALTFDPASEELMTTPPRDRDEHIINKSSTIEVVFLGVLMGGLAFINYGLFVTS IENKLTESHTLYSRATTITYLTIVVCQLLNILSHRYKFTSLLNANLFSNRKMIYSIII SIVLVLGVVYIPGLNSYLDFAPVPIQDWIRVLSAGGVFLLAFEGIKWYRRRNI" misc_feature 2105262..2105465 /locus_tag="Acear_2001" /note="Cation transporter/ATPase, N-terminus; Region: Cation_ATPase_N; cl02930" /db_xref="CDD:194483" misc_feature 2105280..2107979 /locus_tag="Acear_2001" /note="Cation transport ATPase [Inorganic ion transport and metabolism]; Region: MgtA; COG0474" /db_xref="CDD:30822" misc_feature 2105496..2106197 /locus_tag="Acear_2001" /note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122" /db_xref="CDD:189402" misc_feature 2106876..2107220 /locus_tag="Acear_2001" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature 2106936..2106938 /locus_tag="Acear_2001" /note="motif II; other site" /db_xref="CDD:119389" misc_feature 2107425..2107964 /locus_tag="Acear_2001" /note="Cation transporting ATPase, C-terminus; Region: Cation_ATPase_C; pfam00689" /db_xref="CDD:189671" gene complement(2108079..2108633) /locus_tag="Acear_2002" /db_xref="GeneID:9514061" CDS complement(2108079..2108633) /locus_tag="Acear_2002" /note="KEGG: mhu:Mhun_0802 YeeE/YedE family protein; SPTR: Q2FPG1 YeeE/YedE family protein" /codon_start=1 /transl_table=11 /product="YeeE/YedE family protein" /protein_id="YP_003828564.1" /db_xref="GI:302392744" /db_xref="GeneID:9514061" /translation="MLTDLHNKDKLQLALGLVMGIIFGFLLQKAGLTNYQIIIGQLLL RDFTMFKVVSSAIITGMIGVYFLREKELVELHPGSGSLWTAVCGGLIFGIGFGILGYC PGTVVGASGRGAIDGLFGILGITIGVWLFSLIYPLINDTVLTKTEFDELTIPEMLGVN HWWVIISVVIILITILGVIERLGL" gene complement(2108646..2109143) /locus_tag="Acear_2003" /db_xref="GeneID:9514062" CDS complement(2108646..2109143) /locus_tag="Acear_2003" /note="InterPro IPR007272; KEGG: gsu:GSU2310 YeeE/YedE family protein; PFAM: protein of unknown function DUF395 YeeE/YedE; SPTR: Q74AP2 YeeE/YedE family protein; PFAM: YeeE/YedE family (DUF395)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828565.1" /db_xref="GI:302392745" /db_xref="GeneID:9514062" /translation="MSNWSPYLVGAGIGILSWLTFLLSNKTIGVSTAFVRTAGIIEKF FRGDKALERKYYEEYPPVIDWGWTFVLGIAIGAFISVQLSGDFRLVSIPAFWNQQFGS SKLFRWILAGIGGIFIGFGARWAGGCTSGHGISGTLQLAVISWITFIFFFIGGVASAF ILYSF" gene 2109297..2110412 /locus_tag="Acear_2004" /db_xref="GeneID:9514063" CDS 2109297..2110412 /locus_tag="Acear_2004" /note="InterPro IPR004761:IPR002345; KEGG: pth:PTH_1839 hypothetical protein; PFAM: spore germination protein; SPTR: A5D161 Hypothetical membrane protein; TIGRFAM: spore germination protein; PFAM: spore germination protein; TIGRFAM: spore germination protein (amino acid permease)" /codon_start=1 /transl_table=11 /product="spore germination protein" /protein_id="YP_003828566.1" /db_xref="GI:302392746" /db_xref="GeneID:9514063" /translation="MKQKKISLFQYSALLITFLLGTIIIICPEVIISDQLGWLTDITA IALSFISILLLTALHQPLFDSNIVEIANQVGGVWFRIVVGILYIIYVLHLGALNLRLI GNFLSTTIMSNMPILIFTFTLTLVSAYAVTMGIETIARVGQVILPVILLIFTLLLILA IPDYDPSNLLPLKLKTKNLLQGGYLIWAFPLGNLILFSFLFPYVRLQSEKSKTKQYLL YTSIALLISGVILTLRTLTLTMAFGADLASSFTYPVFSMVGIIEIGDFLERLESAFLV MWIGTAFITILFCYWTAVEAVGTLVRSKNKKSFIIPIGIIMVSLSQILFKNYSEQYQF TLHTWPHYAAIFLLIIPVIILLLLLLKKIKNNIKDRQ" misc_feature 2109492..2110325 /locus_tag="Acear_2004" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene complement(2110396..2110605) /locus_tag="Acear_2005" /db_xref="GeneID:9514064" CDS complement(2110396..2110605) /locus_tag="Acear_2005" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828567.1" /db_xref="GI:302392747" /db_xref="GeneID:9514064" /translation="MLVIILIIIYYFNIKEVISLFFKKDYNSFVAVLVLTLISFYLSF GQVLDWPIPQISELMRQPLSFTAGL" gene complement(2110616..2111848) /locus_tag="Acear_2006" /db_xref="GeneID:9514065" CDS complement(2110616..2111848) /locus_tag="Acear_2006" /note="InterPro IPR008844; KEGG: cac:CA_P0019 spore germination protein, GrkC; PFAM: spore germination B3 GerAC family protein; SPTR: Q97TS8 spore germination protein, GRKC; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family" /codon_start=1 /transl_table=11 /product="germination protein, Ger(x)C family" /protein_id="YP_003828568.1" /db_xref="GI:302392748" /db_xref="GeneID:9514065" /translation="MEQSIRIKKIVISIILIILLFSLGGCVGQKELNNLGIINLMGID LTADGEYKVTVHILKPSTGQGGEPANAPGPGSAIWVGQAEGETIEKAVKEIRAKTSWL LIWSHCDIFVLGNKLCRTGIGDVVDFLARNEEIRLTSNVITATDKAWQILKHSPEEKK EPVADQIDGLIKNIADWSKAYNLNLKEVMARLASGNQEVVLGKLELVRAEPVKEGQES SSSSEGKTDKEDGLKKVLKMEGAAVFKKDKLIGSLTPEETRGYMRIIDEIKLHSMDLF LSGHNSPVSLDTYNSQIEIKWDSANPKTFLISIKELSRLAEQDSEISQTSLLTANKIE SLKEEAVKKEIISTIKKSQQLQSDIFGLKGIVKQKSPSTWEKLKQDWEKNFSNLSFKV EVESILKQVGKIHKPIFE" misc_feature complement(2110637..2111776) /locus_tag="Acear_2006" /note="Spore germination B3/ GerAC like, C-terminal; Region: Spore_GerAC; cl05194" /db_xref="CDD:195053" gene complement(2112009..2113301) /locus_tag="Acear_2007" /db_xref="GeneID:9514066" CDS complement(2112009..2113301) /locus_tag="Acear_2007" /note="COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: cbi:CLJ_0076 transposase; PFAM: transposase IS605 OrfB; SPTR: C3KS84 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region" /codon_start=1 /transl_table=11 /product="transposase, IS605 OrfB family" /protein_id="YP_003828569.1" /db_xref="GI:302392749" /db_xref="GeneID:9514066" /translation="MKLSFKFKPNFSHKQLEIVKELSWHCSKLYNIVNYQIKNNEEVK PVYTRLENKFKDNWHTNYLHSHNRQQLFKQLAQDWKSYFKSIEDYNNNPGKYQGQPKP PNFKYLDNNPSEIIFTNLATRVREDNLLLSLSKEIKNQFQVDSLKFELPPVVQGLINL DNLSMSKGHSVENSLQQVRIKKDNLSSDWYLIIIHKVNEKDKAQGDNVMAIDLGLDNL ATLTFKDNPENYIINGKPLKSKNKYFNQEINRLQSIRMKQTGSKNFKDTKQIKQLRIK RQNYISNYLHQASRKIINLAKRHGVSKIIIGDLKQIKQNINYNKSFVQVPIQRLKDLI EYKAKLEGIEVNIINEVYTSGCSALDLEKLNKANYNKSRRVKRGLFKSEIDLNINADV NGSLNIMRKFLTKKCIPELVNQARDNGVVNPPERIRVA" misc_feature complement(2112087..2113301) /locus_tag="Acear_2007" /note="Transposase and inactivated derivatives [DNA replication, recombination, and repair]; Region: COG0675" /db_xref="CDD:31019" misc_feature complement(2112363..2113115) /locus_tag="Acear_2007" /note="Probable transposase; Region: OrfB_IS605; pfam01385" /db_xref="CDD:189964" misc_feature complement(2112240..2112473) /locus_tag="Acear_2007" /note="transposase, IS605 OrfB family, central region; Region: tspaseT_teng_C; TIGR01766" /db_xref="CDD:162522" misc_feature complement(2112099..2112317) /locus_tag="Acear_2007" /note="Putative transposase DNA-binding domain; Region: OrfB_Zn_ribbon; pfam07282" /db_xref="CDD:115907" gene 2113386..2113805 /locus_tag="Acear_2008" /db_xref="GeneID:9514067" CDS 2113386..2113805 /locus_tag="Acear_2008" /note="COGs: COG1943 transposase and inactivated derivatives; InterPro IPR002686; KEGG: bdu:BDU_1120 transposase-like protein; PFAM: transposase IS200-family protein; SPTR: C6PAU4 transposase IS200-family protein; PFAM: transposase IS200 like" /codon_start=1 /transl_table=11 /product="transposase IS200-family protein" /protein_id="YP_003828570.1" /db_xref="GI:302392750" /db_xref="GeneID:9514067" /translation="MNRQLNSNRHSVYSLKYHLVVITKYRHKCINSKIFDELEKIFTR LLNDKDCKVLEFAGEEDHIHVLFETPPQIQLSKLVNTLKTVSSRLIKKDYEEHLKDYY WESAFWSRSYCIISTGGKKSNDNIKKIINRYLKSIEK" misc_feature 2113419..2113742 /locus_tag="Acear_2008" /note="Transposase IS200 like; Region: Y1_Tnp; cl00848" /db_xref="CDD:154036" gene complement(2114139..2115173) /locus_tag="Acear_2009" /db_xref="GeneID:9514068" CDS complement(2114139..2115173) /locus_tag="Acear_2009" /note="COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149:IPR011032:IPR016040; KEGG: deb:DehaBAV1_0246 alcohol dehydrogenase; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; SPTR: A5FSJ2 alcohol dehydrogenase GroES domain protein; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase GroES domain protein" /protein_id="YP_003828571.1" /db_xref="GI:302392751" /db_xref="GeneID:9514068" /translation="MKAAVLKGQGEFNLADVEDTECPPGGVIVKVKSAGICSADVRMI CQGHKALDYPRIPGHEVAGIVAENRAAGSEFEVGDRVQIAPEIICNECSYCREGITNQ CEDIGIMGFTHDGGFAEYIMIPPAGVESGILNPIPVGLSFMEATLAEPLACSINAQEL ARVSKGDRVLVIGAGVIGCLHTMLAKANGAQQVLIADKLTSRINLAEQTEANCFIDLS IESIEEAVTAETENKGVDVIILACEEAALSIPLFKLLAPRGRISFFSSLPYHQSNIEL DANELHYKEQMIVGAYGCRVDQNKKALELMTKELEVDWLITDEISLDEIRTGIERLIN YEGLKTVINF" misc_feature complement(2114142..2115173) /locus_tag="Acear_2009" /note="Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]; Region: Tdh; COG1063" /db_xref="CDD:31263" misc_feature complement(2114145..2115173) /locus_tag="Acear_2009" /note="L-iditol 2-dehydrogenase; Region: iditol_2_DH_like; cd08235" /db_xref="CDD:176197" misc_feature complement(order(2114295..2114303,2114379..2114384, 2114442..2114444,2114448..2114453,2114523..2114525, 2114568..2114570,2114580..2114585,2114640..2114657, 2114715..2114717,2114727..2114729,2115048..2115050, 2115057..2115065)) /locus_tag="Acear_2009" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176197" misc_feature complement(order(2114727..2114729,2114997..2114999, 2115057..2115059,2115063..2115065)) /locus_tag="Acear_2009" /note="catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176197" gene complement(2115517..2115621) /locus_tag="Acear_2010" /pseudo /db_xref="GeneID:9514069" gene complement(2115717..2116529) /locus_tag="Acear_2011" /db_xref="GeneID:9514070" CDS complement(2115717..2116529) /locus_tag="Acear_2011" /note="COGs: COG1464 ABC-type metal ion transport system periplasmic component/surface antigen; InterPro IPR004478:IPR004872; KEGG: tpd:Teth39_1334 YaeC family lipoprotein; PFAM: NLPA lipoprotein; SPTR: A1HMH7 Lipoprotein, YaeC family; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family" /codon_start=1 /transl_table=11 /product="lipoprotein, YaeC family" /protein_id="YP_003828572.1" /db_xref="GI:302392752" /db_xref="GeneID:9514070" /translation="MMKKITVILLLCVLLASFVVGCADDKDVGSEKKVLKVGATAGPF TKILERVKPILAKKNIELEIVTFTDYVAPNLALAEGEIKANTFQHIPYFNSFKEGREL DLTTVGKTIIIPMAIYSDKYESLNQLPEGATVAIPNDPTNGGRALLLLAQAGVFELKE GVGIEATVEDIVANPKDIEIHEVDAAQTARMLPDVAAAAVNSNYALELDMNPREDSIF IEDKDSPYVCIIAVRPEDKDDPVIKEFVEAYQSEEIREFINEHFNGSVIPAF" misc_feature complement(2115720..2116427) /locus_tag="Acear_2011" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(2116839..2117945) /locus_tag="Acear_2012" /db_xref="GeneID:9514071" CDS complement(2116839..2117945) /locus_tag="Acear_2012" /note="COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: fph:Fphi_1735 cardiolipin synthetase; PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; SPTR: C1UU52 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase" /codon_start=1 /transl_table=11 /product="phospholipase D/transphosphatidylase" /protein_id="YP_003828573.1" /db_xref="GI:302392753" /db_xref="GeneID:9514071" /translation="MEKELLINEIESFAEIIKQIKKAKESIYICMYIWRDDNIGNLIA EELIKAADRGVEIKILKDKAGAVFERIEQQKQSFFHKDVEVGLTIKEWVLSFLYYRDN NRSKEQFRNERLNRMLNHDNITIESDKERQDHSKFYVFDNEVLILGGINIGDKTMDGQ TGEYADYMIKFVDSELVSYFWNRLTNKKPKVGYQDVEFYFNIREQNLFEIKPKVLKLL KEARYRIDIEMAYFGDSDITEEIINAAKRGINVTIITSRESNVQQSLNQHILQKIIDE SSSKVKIYLSDRMIHSKFICIDRSKYFLGSANLHKLGMSKLSELNVLVEKGDGIGAKW SRWREEHLQECQLISGDKNLDYNSLIALTEAVLC" misc_feature complement(2117436..2117864) /locus_tag="Acear_2012" /note="Catalytic domain of phospholipase D superfamily proteins; Region: PLDc_SF; cl15239" /db_xref="CDD:197447" misc_feature complement(order(2117448..2117450,2117493..2117495, 2117499..2117501,2117538..2117540,2117544..2117546)) /locus_tag="Acear_2012" /note="putative active site [active]" /db_xref="CDD:197200" misc_feature complement(2117544..2117546) /locus_tag="Acear_2012" /note="catalytic site [active]" /db_xref="CDD:197200" misc_feature complement(2116899..2117306) /locus_tag="Acear_2012" /note="Catalytic domain of phospholipase D superfamily proteins; Region: PLDc_SF; cl15239" /db_xref="CDD:197447" misc_feature complement(order(2116989..2116991,2117022..2117024, 2117028..2117030,2117067..2117069,2117073..2117075)) /locus_tag="Acear_2012" /note="putative active site [active]" /db_xref="CDD:197200" misc_feature complement(2117073..2117075) /locus_tag="Acear_2012" /note="catalytic site [active]" /db_xref="CDD:197200" gene complement(2118145..2118645) /locus_tag="Acear_2013" /db_xref="GeneID:9514072" CDS complement(2118145..2118645) /locus_tag="Acear_2013" /note="COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: mta:Moth_1212 nitroreductase; PFAM: nitroreductase; SPTR: Q2RJ63 Nitroreductase; PFAM: Nitroreductase family" /codon_start=1 /transl_table=11 /product="nitroreductase" /protein_id="YP_003828574.1" /db_xref="GI:302392754" /db_xref="GeneID:9514072" /translation="MEAILSRRSIREYTSETIPDDTMNQLLKAAMSAPSAGNEQPWHF IVIEKQDTLNQIADLHPDAEMLRDAPAAILVCGDIELEEYDGYWVQDCSAATQNILIT AETKDLGSVWVGIHPDKDRENGIRDLFDLPENIIPFSIVSLGRPAEKKPPVDRYDESR VHYNCW" misc_feature complement(2118148..2118645) /locus_tag="Acear_2013" /note="NAD(P)H:flavin oxidoreductase-like family 1. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes...; Region: NADPH_oxidoreductase_1; cd02150" /db_xref="CDD:48395" misc_feature complement(order(2118301..2118306,2118535..2118537, 2118613..2118615,2118619..2118621,2118625..2118627)) /locus_tag="Acear_2013" /note="putative FMN binding site [chemical binding]; other site" /db_xref="CDD:48395" gene complement(2118714..2119280) /locus_tag="Acear_2014" /db_xref="GeneID:9514073" CDS complement(2118714..2119280) /locus_tag="Acear_2014" /note="COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: ckr:CKR_0849 hypothetical protein; PFAM: BioY protein; SPTR: C5VQI8 BioY family protein; PFAM: BioY family" /codon_start=1 /transl_table=11 /product="BioY protein" /protein_id="YP_003828575.1" /db_xref="GI:302392755" /db_xref="GeneID:9514073" /translation="MNLKIKEIILVGLFAALTAVGAYIRVPIPYVPFTLQVLFVFFAG SLLGSKLGLLSQVVYILTGLVGIPIFTKGGGPSYVLQPTFGYLIGFALGAYVIGKIIN NIREKSFIHYLAANLAGLTVVYIVGVAYLYFNFNFIVGKSFSLMKAIQIGFLVPIPGD LFLSIIAAVISKKVLSQVKTTLPAGISD" misc_feature complement(2118756..2119205) /locus_tag="Acear_2014" /note="BioY family; Region: BioY; cl00560" /db_xref="CDD:153855" gene 2119493..2119660 /locus_tag="Acear_2015" /db_xref="GeneID:9514074" CDS 2119493..2119660 /locus_tag="Acear_2015" /note="InterPro IPR017900:IPR017896:IPR001450:IPR000813; KEGG: swo:Swol_2105 ferredoxin; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A5ZPS0 Putative uncharacterized protein; PFAM: 4Fe-4S binding domain" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_003828576.1" /db_xref="GI:302392756" /db_xref="GeneID:9514074" /translation="MAYTINDECVDCGTCVEECPVDAIIEGDDHFEIDEDECVECGNC LDACPVEAIEE" misc_feature <2119502..2119654 /locus_tag="Acear_2015" /note="RPB11 and RPB3 subunits of RNA polymerase; Region: RNAP_RPB11_RPB3; cl11409" /db_xref="CDD:196219" misc_feature 2119517..2119648 /locus_tag="Acear_2015" /note="4Fe-4S dicluster domain; Region: Fer4_7; pfam12838" /db_xref="CDD:193313" gene complement(2119735..2120763) /locus_tag="Acear_2016" /db_xref="GeneID:9514075" CDS complement(2119735..2120763) /locus_tag="Acear_2016" /EC_number="3.1.1.61" /note="COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterPro IPR001789:IPR000673:IPR011006:IPR008248; KEGG: hor:Hore_22570 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; PRIAM: protein-glutamate methylesterase; SMART: response regulator receiver; SPTR: B8D0R6 Response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; Response regulator receiver domain" /codon_start=1 /transl_table=11 /product="response regulator receiver modulated CheB methylesterase" /protein_id="YP_003828577.1" /db_xref="GI:302392757" /db_xref="GeneID:9514075" /translation="MEKIKVLVIYNSPLVNNVLGKALEKNSEIELVGSATNSYLAVRK VEELKPDILILDIRMANMDCLQYLERFMVHHSIPVIVVSTLTTQRNKLVLKALEMGVV DFLIKPAVTTENKRNEFQTEVISKIKSVARANVVPKFKDDFISRELTVNKEKAILGIG ASTGGFKAIKELLARFTAKMPGIVIIQHMPQEFTSAFVRRLNHISDLEVKEAENGDRI LPGQALVIPGGYESGLEKSDGNYYLWLKNNNQSFKQQSSIDTFFTSLAAEVKDKAIGV LLTGMGNDGAKGLKQIKEAGGYTIVQDEETSALFEMPKQAIEQGASKEVVSLDKITDG IIRVLNNQ" misc_feature complement(2119747..2120763) /locus_tag="Acear_2016" /note="chemotaxis-specific methylesterase; Provisional; Region: PRK00742" /db_xref="CDD:179106" misc_feature complement(2120440..2120745) /locus_tag="Acear_2016" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(2120440..2120445,2120452..2120454, 2120515..2120517,2120572..2120574,2120596..2120598, 2120731..2120736)) /locus_tag="Acear_2016" /note="active site" /db_xref="CDD:29071" misc_feature complement(2120596..2120598) /locus_tag="Acear_2016" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(2120572..2120580,2120584..2120589)) /locus_tag="Acear_2016" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(2120440..2120445) /locus_tag="Acear_2016" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(2119753..2120298) /locus_tag="Acear_2016" /note="CheB methylesterase; Region: CheB_methylest; pfam01339" /db_xref="CDD:144802" gene complement(2120991..2121938) /locus_tag="Acear_2017" /db_xref="GeneID:9514076" CDS complement(2120991..2121938) /locus_tag="Acear_2017" /note="COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: mac:MA0936 hypothetical protein; PFAM: SufBD protein; SPTR: Q8TS69 Putative uncharacterized protein; PFAM: Uncharacterized protein family (UPF0051)" /codon_start=1 /transl_table=11 /product="SufBD protein" /protein_id="YP_003828578.1" /db_xref="GI:302392758" /db_xref="GeneID:9514076" /translation="MIDNDYQEMVDIYDQAGGDKDIFTDSDIAHLVIERDEVIGSNLV EGLEVDVKDNQDDLVEVKIVIKEGHQIAKPVHLCFGVLPEEGLQQIDMDITVEDDAAV EILAHCVFPNARDVTHKMDAEIKVRDNSEYIYREVHDHGTSGGVEVIANTDIVMQENS LLKTIFNLFEGRAGLIDIAYESEIGANSNVEMIAKISGSVDDQIKIKENADLIGVNAR GLLETRIALQDQARADILNEMTAYAAGAKGHVDCTEIIKDEANARAVPVVDVRHPEAK VTHEAAIGSIDSTQLQTLLARGLDEEEASDVIIQGMLRG" misc_feature complement(2121003..2121689) /locus_tag="Acear_2017" /note="Uncharacterized protein family (UPF0051); Region: UPF0051; cl03223" /db_xref="CDD:189167" gene complement(2121928..2122689) /locus_tag="Acear_2018" /db_xref="GeneID:9514077" CDS complement(2121928..2122689) /locus_tag="Acear_2018" /note="COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: mfe:Mefer_1235 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C7P912 ABC transporter related; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003828579.1" /db_xref="GI:302392759" /db_xref="GeneID:9514077" /translation="MTENELLQIKDLDLILDDTVILKDLSLTVNAGQVYALIGPNGCG KSSLAYTLMGLDGYSPSNGEVLFKGEDITDLATQERAQKGITLAWQQPARFEGVKVRK FLALGLESQGREVTEQQLRWALNEVAINPDRYLDREVDDTLSGGERKRIELASILLMD PDLVILDEPDSGVDVIALNNISQVINSFRAQGTGVVLITHSDEMLDLADTAALVCGGN IVRRGQPQQIAAYFKDDCSPCGDNECLVEVAANDR" misc_feature complement(2121949..2122614) /locus_tag="Acear_2018" /note="Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]; Region: sufC; COG0396" /db_xref="CDD:30745" misc_feature complement(2122015..2122614) /locus_tag="Acear_2018" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(2122552..2122575) /locus_tag="Acear_2018" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature complement(order(2122090..2122092,2122186..2122191, 2122420..2122422,2122549..2122557,2122561..2122566)) /locus_tag="Acear_2018" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature complement(2122420..2122431) /locus_tag="Acear_2018" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature complement(2122234..2122263) /locus_tag="Acear_2018" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature complement(2122186..2122203) /locus_tag="Acear_2018" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature complement(2122168..2122179) /locus_tag="Acear_2018" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature complement(2122084..2122104) /locus_tag="Acear_2018" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene complement(2122869..2123108) /locus_tag="Acear_2019" /db_xref="GeneID:9514078" CDS complement(2122869..2123108) /locus_tag="Acear_2019" /note="InterPro IPR005243:IPR012336:IPR012335; KEGG: nth:Nther_0752 redox-active disulfide protein 2; SPTR: B2A7P0 Redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; TIGRFAM: small redox-active disulfide protein 2" /codon_start=1 /transl_table=11 /product="redox-active disulfide protein 2" /protein_id="YP_003828580.1" /db_xref="GI:302392760" /db_xref="GeneID:9514078" /translation="MEIKVYGPGCKNCVKLADNAKAAAEDLGADAEVEKVEDMSEIAQ AGIMSTPGLGINGEVKVKGRVPNVEEIKELIEAEM" misc_feature complement(2122881..2123108) /locus_tag="Acear_2019" /note="Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; Region: Thioredoxin_like; cl00388" /db_xref="CDD:193797" gene complement(2123142..2124089) /locus_tag="Acear_2020" /db_xref="GeneID:9514079" CDS complement(2123142..2124089) /locus_tag="Acear_2020" /note="COGs: COG0701 permease; InterPro IPR005524; KEGG: hmo:HM1_0779 permease; PFAM: permease; SPTR: B0TB49 Permease; PFAM: Predicted permease" /codon_start=1 /transl_table=11 /product="permease" /protein_id="YP_003828581.1" /db_xref="GI:302392761" /db_xref="GeneID:9514079" /translation="MIKSFADLVVYNWLNFSQGSHLGEAVNFFVYDTIKIMLLLSVMI FVISIIRSFFQPERVKKLLSGKKLFVGNAIASFLGVVSPFCSCSTVPIFIGFVEAGVP LGVTFSFLITSPIVNEIALVLLYSIFGWQIATLYLVSGVTVGIVGGIIIGYLGLEDYV EEYVYEIEMEEEEIEAMTWEDRIEYAKHQVKDIVGRIWKFVMIGIAIGGLIHGYVPTG ALADYAGPNNPFSVFVGVLFGIPLYSNAVGTIPIVESLMNKGVAVGTALSFMMATVAL SVPQMVILRKVLKPKLIGIFITIVGVSIIGVGYLFNIVI" misc_feature complement(2123214..2124032) /locus_tag="Acear_2020" /note="Predicted permease; Region: DUF318; cl00487" /db_xref="CDD:119868" gene complement(2124171..2124488) /locus_tag="Acear_2021" /db_xref="GeneID:9514080" CDS complement(2124171..2124488) /locus_tag="Acear_2021" /note="COGs: COG0640 transcriptional regulator protein; InterPro IPR001845:IPR011991; KEGG: drm:Dred_0561 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: B8G158 transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="YP_003828582.1" /db_xref="GI:302392762" /db_xref="GeneID:9514080" /translation="MSELISKLKSKLFKALAHPTRIQILNLLQEGELCVCEIYEALEL SQSNISQHLKVLRDQNLVESQKVGVEVHYKIKNDEVWEILELAKDLIVEQINQTQSAL EDR" misc_feature complement(2124222..2124437) /locus_tag="Acear_2021" /note="Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to...; Region: HTH_ARSR; cd00090" /db_xref="CDD:28974" misc_feature complement(order(2124225..2124233,2124237..2124245, 2124249..2124254,2124309..2124311,2124399..2124401, 2124408..2124413,2124420..2124425,2124432..2124434)) /locus_tag="Acear_2021" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:28974" misc_feature complement(order(2124270..2124278,2124291..2124299, 2124315..2124320,2124324..2124329,2124336..2124341, 2124345..2124356,2124381..2124389,2124426..2124434)) /locus_tag="Acear_2021" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28974" misc_feature complement(order(2124252..2124254,2124378..2124380, 2124387..2124389)) /locus_tag="Acear_2021" /note="putative Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28974" gene complement(2125162..2125316) /locus_tag="Acear_2022" /pseudo /db_xref="GeneID:9514081" gene complement(2125342..2125518) /locus_tag="Acear_2023" /db_xref="GeneID:9514082" CDS complement(2125342..2125518) /locus_tag="Acear_2023" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828583.1" /db_xref="GI:302392763" /db_xref="GeneID:9514082" /translation="MDKLLIVLDDKAQDWLNDIYQSENPQQALEFVLEEIAPQKKKKL HCWDGKNRQRGLKA" gene complement(2125532..2125696) /locus_tag="Acear_2024" /db_xref="GeneID:9514083" CDS complement(2125532..2125696) /locus_tag="Acear_2024" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828584.1" /db_xref="GI:302392764" /db_xref="GeneID:9514083" /translation="MSKLFISLDQKEQTMLERICLDKDPQEALEFIVEYIIPKVDKKK KGGMKHPDLD" gene complement(2125754..2125945) /locus_tag="Acear_2025" /db_xref="GeneID:9514084" CDS complement(2125754..2125945) /locus_tag="Acear_2025" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828585.1" /db_xref="GI:302392765" /db_xref="GeneID:9514084" /translation="MTPEEQKEIIAEQIKERRAADGDIDCEFVAGIADKVGLEPLEVG KIVYEELGYKIKGCPYYGD" gene complement(2125967..2126125) /locus_tag="Acear_2026" /db_xref="GeneID:9514085" CDS complement(2125967..2126125) /locus_tag="Acear_2026" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828586.1" /db_xref="GI:302392766" /db_xref="GeneID:9514085" /translation="MDKLFITFDERKLDLLADIYQTEDSQQALEFILEEIVPQKKKET QCWEVRKR" gene complement(2126151..2127296) /locus_tag="Acear_2027" /db_xref="GeneID:9514086" CDS complement(2126151..2127296) /locus_tag="Acear_2027" /note="COGs: COG0520 Selenocysteine lyase; InterProIPR010969:IPR020578:IPR000192:IPR015424:IPR 015421; KEGG: mta:Moth_2214 cysteine desulphurase-like protein; PFAM: aminotransferase class V; SPTR: Q2RGD6 Putative uncharacterized protein; TIGRFAM: cysteine desulfurase family protein; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein" /codon_start=1 /transl_table=11 /product="cysteine desulfurase family protein" /protein_id="YP_003828587.1" /db_xref="GI:302392767" /db_xref="GeneID:9514086" /translation="MSIYLDNAATSFPKPESVYQAVDNYQRNIGVNPGRGSYRRAEQA QEIIVETRKLLSQLFNIETPARIVFTANVTEALNLTLKGLLQEGDHVITSQLEHNAMW RPLKRLERERNIDLTAIPCLEGSYLDVDQIEKAICPETKLVALNHASNVTGAILPIKE VGDICRQHQIPLLVDTAQTAGVYPIDVQRLNIDLLAFTGHKGLLGPTGTGGLYINSDI ELQPLKEGGTGGDSLLERQPDYLPNRFEAGTHNIVGIAGLRAAVKFILEESITNIRAH EQELTSYMLDYLQQIPGLKIYGPAEPERQVAVISFNLEEIPPEEAAYVLDEVYEIMVR AGLHCAPPAHRCIGTVNRGTVRISFNYFNTKEDCQQLYEALCDLSNC" misc_feature complement(2126172..2127290) /locus_tag="Acear_2027" /note="Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS...; Region: SufS_like; cd06453" /db_xref="CDD:99746" misc_feature complement(2126172..2127290) /locus_tag="Acear_2027" /note="Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]; Region: csdA; COG0520" /db_xref="CDD:30866" misc_feature complement(order(2126691..2126696,2126700..2126702, 2126763..2126768,2126772..2126774,2127003..2127005, 2127066..2127068,2127075..2127080)) /locus_tag="Acear_2027" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99746" misc_feature complement(2126691..2126693) /locus_tag="Acear_2027" /note="catalytic residue [active]" /db_xref="CDD:99746" gene complement(2127318..2127665) /locus_tag="Acear_2028" /db_xref="GeneID:9514087" CDS complement(2127318..2127665) /locus_tag="Acear_2028" /note="COGs: COG0640 transcriptional regulator protein; InterPro IPR001845:IPR011991; KEGG: hor:Hore_20100 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: B8CZQ5 Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="YP_003828588.1" /db_xref="GI:302392768" /db_xref="GeneID:9514087" /translation="MGKISNSIYKARAKIAKALAHWLRIEIVDLLAEEGEKCVCELTE ALDASQSVISKHLSTLKEAGIIDSRKEGLNVYYFLETPCIVEFFSCLDDVIMKEFKRK RKKINNIFRPKKN" misc_feature complement(<2127429..2127620) /locus_tag="Acear_2028" /note="Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to...; Region: HTH_ARSR; cd00090" /db_xref="CDD:28974" misc_feature complement(order(2127474..2127476,2127567..2127569, 2127576..2127581,2127588..2127593,2127600..2127602, 2127609..2127611,2127615..2127620)) /locus_tag="Acear_2028" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:28974" misc_feature complement(order(2127435..2127443,2127456..2127464, 2127480..2127485,2127489..2127494,2127501..2127506, 2127510..2127521,2127546..2127554,2127594..2127602, 2127612..2127617)) /locus_tag="Acear_2028" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28974" misc_feature complement(order(2127543..2127545,2127552..2127554)) /locus_tag="Acear_2028" /note="putative Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28974" gene complement(2127878..2128954) /locus_tag="Acear_2029" /db_xref="GeneID:9514088" CDS complement(2127878..2128954) /locus_tag="Acear_2029" /note="COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR004706:IPR002657; KEGG: aoe:Clos_1114 arsenical-resistance protein; PFAM: Bile acid:sodium symporter; SPTR: A8MGW6 Arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein" /codon_start=1 /transl_table=11 /product="arsenical-resistance protein" /protein_id="YP_003828589.1" /db_xref="GI:302392769" /db_xref="GeneID:9514088" /translation="MSQEKMEVKEETEGLGFFEKYLTLWVAICIAIGIGVGRFLSAIP ETLSRFEYAQVNIPVAVLIWFMIYPMMVQIDFSSIIEAGKKPKGLGLTLVVNWLIKPF TMAFFGWLFLKNIFGVFISPELADQYVAGMILLGSAPCTAMVFVWSYLTDGDANYTLI QVAVNDLVLVFAYAPLVMLLLGVTDFNVPYDTVLLSVVLYIIVPLVAGYLSRRYIIKN KGIDWLENVYLKKLDNFTIVGLLLTLIILFAFQGDIILNNPFDILLIAIPLTIQTFFV FILGYGGAKLLKLEHPVAAPASMIGASNFFELAVATAISIFGLTSGAALATVVGVLVE VPVMLALVAIANRTKHWFPQKSKA" misc_feature complement(2127989..2128912) /locus_tag="Acear_2029" /note="Membrane transport protein; Region: Mem_trans; cl09117" /db_xref="CDD:189190" gene complement(2129181..2129885) /locus_tag="Acear_2030" /db_xref="GeneID:9514089" CDS complement(2129181..2129885) /locus_tag="Acear_2030" /note="COGs: COG0622 phosphoesterase; InterPro IPR000979:IPR004843:IPR011152; KEGG: drm:Dred_0560 phosphodiesterase; PFAM: metallophosphoesterase; SPTR: A4J201 phosphodiesterase, MJ0936 family; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family" /codon_start=1 /transl_table=11 /product="phosphodiesterase, MJ0936 family" /protein_id="YP_003828590.1" /db_xref="GI:302392770" /db_xref="GeneID:9514089" /translation="MRLAVITDIHSNIYALEQVLNDIKTRNVDQIVCAGDLVGYTPFP NEVISKVKQEKIETIQGNYDDAIGNLRITCGCDYETEREEKIGLSSLQFTNEEITEDN REFLKDLPQELRLELGNYTALVVHGSPRQLNEYLYADSEQVEEVAAELEEDILICGHT HLPYHRVINGRHIINAGSVGKPKHGNSNGIYTVVEVEDNRVTAEFIEVAYPVEKVTAK IKETDLADELIGILEG" misc_feature complement(2129397..2129885) /locus_tag="Acear_2030" /note="Calcineurin-like phosphoesterase; Region: Metallophos; pfam00149" /db_xref="CDD:189420" misc_feature complement(2129268..2129882) /locus_tag="Acear_2030" /note="Escherichia coli YfcE and related proteins, metallophosphatase domain; Region: MPP_YfcE; cd00841" /db_xref="CDD:163617" misc_feature complement(order(2129403..2129405,2129409..2129411, 2129508..2129510,2129658..2129660,2129700..2129702, 2129778..2129780,2129856..2129858,2129862..2129864)) /locus_tag="Acear_2030" /note="active site" /db_xref="CDD:163617" misc_feature complement(order(2129403..2129405,2129409..2129411, 2129508..2129510,2129700..2129702,2129778..2129780, 2129856..2129858,2129862..2129864)) /locus_tag="Acear_2030" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163617" misc_feature complement(order(2129487..2129489,2129523..2129558, 2129655..2129660,2129700..2129708,2129715..2129717, 2129796..2129801)) /locus_tag="Acear_2030" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:163617" gene complement(2129913..2130227) /locus_tag="Acear_2031" /db_xref="GeneID:9514090" CDS complement(2129913..2130227) /locus_tag="Acear_2031" /note="COGs: COG0640 transcriptional regulator protein; InterPro IPR018334:IPR001845:IPR011991; KEGG: aoe:Clos_1112 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: A8MGW4 transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="YP_003828591.1" /db_xref="GI:302392771" /db_xref="GeneID:9514090" /translation="MEKIAETTELFKALSDERRLKIVDLLACCGKLCVCDVTEELGLS QPNISHHLKILKNAGLIKATKRGRWVDYELNHDKVEEFKDSLDFITAKQPGRYDCTKS DC" misc_feature complement(2129994..2130197) /locus_tag="Acear_2031" /note="Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to...; Region: HTH_ARSR; cd00090" /db_xref="CDD:28974" misc_feature complement(order(2130051..2130053,2130144..2130146, 2130153..2130158,2130165..2130170,2130177..2130179, 2130186..2130188,2130192..2130197)) /locus_tag="Acear_2031" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:28974" misc_feature complement(order(2130012..2130020,2130033..2130041, 2130057..2130062,2130066..2130071,2130078..2130083, 2130087..2130098,2130123..2130131,2130171..2130179, 2130189..2130194)) /locus_tag="Acear_2031" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28974" misc_feature complement(order(2130120..2130122,2130129..2130131)) /locus_tag="Acear_2031" /note="putative Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28974" gene complement(2130834..2131646) /locus_tag="Acear_2032" /db_xref="GeneID:9514091" CDS complement(2130834..2131646) /locus_tag="Acear_2032" /note="COGs: COG2801 transposase and inactivated derivatives; InterPro IPR001584:IPR012337; KEGG: hor:Hore_00290 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: B8D037 Integrase catalytic region; PFAM: Integrase core domain" /codon_start=1 /transl_table=11 /product="Integrase catalytic region" /protein_id="YP_003828592.1" /db_xref="GI:302392772" /db_xref="GeneID:9514091" /translation="MCQVLEVSRSGYYKWLNRKPSQREKINKKLKLKIAEIYWQHNGT YGSPRIHRVLRKEGYTVNIKRVARLMRIMGLKAIQKRKFKRTTNSNHDLPLKENLLKR DFDIDKPDKVWVSDITYISTKKGWLYLAVVIDLYSRKVVGYSMSKRINTDLIMSATKM AISRRNPEAGLIFHSDRGSQYASHKLQNLFKQHSIRSSMSRKGDCWDNAVAESFFGSL KTELVYHKKYLTRNQARLDIFEYIAGYYNKVRLHSYLNYMSPKNYEKERKMA" misc_feature complement(2130852..2131634) /locus_tag="Acear_2032" /note="putative transposase OrfB; Reviewed; Region: PHA02517" /db_xref="CDD:177368" misc_feature complement(2130981..2131328) /locus_tag="Acear_2032" /note="Integrase core domain; Region: rve; cl01316" /db_xref="CDD:194099" gene complement(2131694..2131996) /locus_tag="Acear_2033" /db_xref="GeneID:9514092" CDS complement(2131694..2131996) /locus_tag="Acear_2033" /note="InterPro IPR002514:IPR009057; KEGG: hor:Hore_13730 transposase IS3/IS911 family protein; PFAM: transposase IS3/IS911 family protein; SPTR: B8CXV6 transposase IS3/IS911 family protein; PFAM: transposase" /codon_start=1 /transl_table=11 /product="transposase IS3/IS911 family protein" /protein_id="YP_003828593.1" /db_xref="GI:302392773" /db_xref="GeneID:9514092" /translation="MGEKRKSYTEEFKKDAVELSNRSDKTVKDVSENLDIPYGTLVRW RREYKDKGDLAFPGHGKQKLTSEQKEIQRLKKELKDAKTERDILKKAVSIFSNEPK" misc_feature complement(2131757..2131990) /locus_tag="Acear_2033" /note="Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed...; Region: HTH_Hin_like; cl01116" /db_xref="CDD:186341" gene complement(2132103..2132402) /locus_tag="Acear_2034" /db_xref="GeneID:9514093" CDS complement(2132103..2132402) /locus_tag="Acear_2034" /note="InterPro IPR001845:IPR011991; KEGG: dae:Dtox_2551 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1TEC0 transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="YP_003828594.1" /db_xref="GI:302392774" /db_xref="GeneID:9514093" /translation="MEQKEENWQERLAQLTKALGHPHRIKIIEILADLPDDNQCIVGS IVEQLPVSQSTVSQHLKVLKEAGWIKGRIDGPRVCYCLEDDVFTEYRTLFDQFNI" misc_feature complement(2132118..2132354) /locus_tag="Acear_2034" /note="Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to...; Region: HTH_ARSR; cd00090" /db_xref="CDD:28974" misc_feature complement(order(2132121..2132129,2132133..2132141, 2132145..2132150,2132202..2132204,2132304..2132306, 2132313..2132318,2132325..2132330,2132337..2132339, 2132346..2132348,2132352..2132354)) /locus_tag="Acear_2034" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:28974" misc_feature complement(order(2132163..2132171,2132184..2132192, 2132208..2132213,2132217..2132222,2132229..2132234, 2132238..2132249,2132274..2132282,2132331..2132339, 2132349..2132354)) /locus_tag="Acear_2034" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28974" misc_feature complement(order(2132148..2132150,2132271..2132273, 2132280..2132282)) /locus_tag="Acear_2034" /note="putative Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28974" gene complement(2132422..2133222) /locus_tag="Acear_2035" /db_xref="GeneID:9514094" CDS complement(2132422..2133222) /locus_tag="Acear_2035" /note="COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: dae:Dtox_2552 methyltransferase type 11; PFAM: methyltransferase type 11; SPTR: C1TEC1 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain" /codon_start=1 /transl_table=11 /product="methyltransferase type 11" /protein_id="YP_003828595.1" /db_xref="GI:302392775" /db_xref="GeneID:9514094" /translation="MNDSKNDIKEKVRENYSQIVEGENKGCCSSSGCCSGNSEGIDIA QISNKLGYTSEDLETDFIEANQGLGCGNPQAITNLQPGQTVLDLGCGAGFDVFLAARE VGIEGKVIGVDMTSEMITKARKTAEENNFENVEFRLGEIEALPAADNSVDVVISNCVI NLSVDKEAVFQEIYRVLKSGGRIAISDVVKNNELSEEIKDNLENYSRCITGAIPAEEL EEIMEKNGFEDVEIKRKENSEEIVQDWSTEIQPEDFIYSAYITGKKPE" misc_feature complement(2132656..2132973) /locus_tag="Acear_2035" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(2132752..2132754,2132800..2132808, 2132881..2132886,2132941..2132961)) /locus_tag="Acear_2035" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(2134069..2134251) /locus_tag="Acear_2036" /db_xref="GeneID:9514095" CDS complement(2134069..2134251) /locus_tag="Acear_2036" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828596.1" /db_xref="GI:302392776" /db_xref="GeneID:9514095" /translation="MCKTKEVEGPNHTRKRYTLEGKDIIVESFKGGQRACGNHCISFD SEREAQEYFETEIKEE" gene complement(2134286..2135419) /locus_tag="Acear_2037" /db_xref="GeneID:9514096" CDS complement(2134286..2135419) /locus_tag="Acear_2037" /note="COGs: COG0502 Biotin synthase; InterPro IPR007197:IPR013785:IPR005244:IPR006638; KEGG: dps:DP2376 biotin synthase; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C4BY12 Biotin synthase-like enzyme; PFAM: radical SAM superfamily" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003828597.1" /db_xref="GI:302392777" /db_xref="GeneID:9514096" /translation="MRLEQVLNKNNLNRDDLIYLMGLKDEDKLEKLYNRAYEIKSETV GQKVYFRGLIEFSNRCIKNCNYCGIRHDNNKVNRYTMNEEEILESANWVYENNYGSIV LQSGERNDEEYIEFVNKLVKKIKELSNGELGITLSLGEQTKETYQKWFDLGAHRYLLR IETSNEELYKSIHPNDHDFQSRKECIAELREIGYQVGTGVMIGLPGQTREDLVDDILF FKDESIDMIGMGPYVIHEDTPLVQEVTDQAELRTRNFTWSLKMVAILRLAMPDINIAA TTALQALNPIGRELALQAGANILMPIVTHPNYREDYQLYENKPCIDEKPSDCKDCLAN RVKNVGDEIIYGAWGDSPHYFKRIKGRESDLGSQIDIDNAAGK" misc_feature complement(2134391..2135386) /locus_tag="Acear_2037" /note="biotin synthase; Provisional; Region: PRK07094" /db_xref="CDD:180835" misc_feature complement(2134700..2135260) /locus_tag="Acear_2037" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(2134724..2134729,2134817..2134819, 2134940..2134942,2135009..2135017,2135093..2135095, 2135099..2135101,2135105..2135107,2135216..2135224, 2135228..2135230,2135234..2135236,2135240..2135242)) /locus_tag="Acear_2037" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" misc_feature complement(<2134517..2134717) /locus_tag="Acear_2037" /note="Biotin and Thiamin Synthesis associated domain; Region: BATS; cl06149" /db_xref="CDD:157061" gene 2135723..2135842 /locus_tag="Acear_2038" /pseudo /db_xref="GeneID:9514097" gene 2136167..2136379 /locus_tag="Acear_2039" /pseudo /db_xref="GeneID:9514098" gene 2136566..2136979 /locus_tag="Acear_2040" /pseudo /db_xref="GeneID:9514099" gene 2137015..2138316 /locus_tag="Acear_2041" /pseudo /db_xref="GeneID:9514100" gene complement(2138452..2138613) /locus_tag="Acear_2042" /pseudo /db_xref="GeneID:9514101" gene 2138716..2138919 /locus_tag="Acear_2043" /db_xref="GeneID:9514102" CDS 2138716..2138919 /locus_tag="Acear_2043" /note="InterPro IPR001387; KEGG: avn:Avin_49660 hypothetical protein; SPTR: C3WVM5 Predicted protein" /codon_start=1 /transl_table=11 /product="XRE family transcriptional regulator" /protein_id="YP_003828598.1" /db_xref="GI:302392778" /db_xref="GeneID:9514102" /translation="MIKSKLSVLMGIKKVNIQDVHEGTGINRNTISRLYHDKLKRVDF DTLNRLCKYFDCQVEDVLEYSKD" misc_feature 2138716..2138916 /locus_tag="Acear_2043" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cl09100" /db_xref="CDD:195788" gene complement(2139028..2139243) /locus_tag="Acear_2044" /db_xref="GeneID:9514103" CDS complement(2139028..2139243) /locus_tag="Acear_2044" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828599.1" /db_xref="GI:302392779" /db_xref="GeneID:9514103" /translation="MTEKVLLLVEENGDIRMASVDAGINLGMIAQEEGLKKVRVERGE FEGQILNNLDEYEYDFDKGRIVKRKKN" gene complement(2139453..2140736) /locus_tag="Acear_2045" /db_xref="GeneID:9514104" CDS complement(2139453..2140736) /locus_tag="Acear_2045" /note="COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: drm:Dred_2890 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: A4J8J1 Thiamine biosynthesis protein thiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC" /codon_start=1 /transl_table=11 /product="hydroxymethylpyrimidine synthase" /protein_id="YP_003828600.1" /db_xref="GI:302392780" /db_xref="GeneID:9514104" /translation="MTQMTEAKAGRITAEMKQVANKEGVSAEFIREQIAAGKIVIPAN KNHQHLDPNGFGEGLTTKVNANFGTSEDYPEVDKELEKLEAAVEAGADAVMDLSTGDK ITETRQAILAEAEVPLGTVPIYQATVETLQDDKAIVDLTVDDLFGVIEKQAQDGVDFI TVHCGLTLETIRHLKEEGRVTDIVSRGGSFITGWMLHNDAENPLYEYYDRLLEIAYEY DVTLSLGDGLRPGSLADATDRSQIHELLVLGELVDRAREADVQVMVEGPGHVPFDQIE TNIQLQKELCKGAPFYVLGPLVTDIAVGYDHIAAAIGGTMAASCGADFLCYVTPAEHI GLPNIEEVREGVIATKIAAHSADIAKGNSSAKKQDLQMAEARKALDWEQQIELAIDSK KAKESRAAHNQEIQDEDACSMCGSYCAMKIVDEAL" misc_feature complement(2139456..2140736) /locus_tag="Acear_2045" /note="ThiC family; Region: ThiC; cl08031" /db_xref="CDD:195653" gene complement(2140748..2141533) /locus_tag="Acear_2046" /db_xref="GeneID:9514105" CDS complement(2140748..2141533) /locus_tag="Acear_2046" /EC_number="2.7.1.50" /note="COGs: COG2145 Hydroxyethylthiazole kinase sugar kinase family; InterPro IPR000417:IPR011144; KEGG: tpd:Teth39_1654 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase; PRIAM: Hydroxyethylthiazole kinase; SPTR: C5UCM1 Hydroxyethylthiazole kinase; PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase" /codon_start=1 /transl_table=11 /product="hydroxyethylthiazole kinase" /protein_id="YP_003828601.1" /db_xref="GI:302392781" /db_xref="GeneID:9514105" /translation="MQETLSRIREEKPLVHQITNYVTVNDAANITLYWGGLPVMADAK EEVAEMVQAAQALVLNIGTLNQRQVSSMIKAGKQANRSGIPVILDPVGVGATTFRTET ARRILDELQVAVIKGNQGEISILAEGQGEVRGVESVGDYEELVANAQGLAAAEEAVVV VSGTKDIVTDGETVYKVNNGHPLLGEIVGTGCMLGSTLGVFTGVSDDYLAASLTAVTA YGIAGEIASKKASKPASYKTAFMDSISELTDETVINHEEITKL" misc_feature complement(2140799..2141521) /locus_tag="Acear_2046" /note="4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz. A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine...; Region: THZ_kinase; cd01170" /db_xref="CDD:29354" misc_feature complement(order(2141345..2141350,2141354..2141356, 2141414..2141416,2141420..2141422,2141438..2141440, 2141450..2141452,2141468..2141470,2141474..2141476)) /locus_tag="Acear_2046" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:29354" misc_feature complement(order(2140799..2140801,2140808..2140813, 2140817..2140825,2140829..2140834,2140970..2140981, 2141237..2141242,2141339..2141350,2141384..2141389, 2141396..2141401,2141405..2141416,2141438..2141440, 2141447..2141452,2141456..2141473)) /locus_tag="Acear_2046" /note="multimerization interface [polypeptide binding]; other site" /db_xref="CDD:29354" misc_feature complement(order(2140958..2140960,2140964..2140966, 2140982..2140984,2141036..2141038,2141042..2141044, 2141048..2141050,2141171..2141173,2141180..2141182, 2141186..2141188,2141267..2141269)) /locus_tag="Acear_2046" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29354" gene complement(2141538..2142179) /locus_tag="Acear_2047" /db_xref="GeneID:9514106" CDS complement(2141538..2142179) /locus_tag="Acear_2047" /EC_number="2.5.1.3" /note="COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733:IPR013785; KEGG: hut:Huta_1463 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; PRIAM: Thiamine-phosphate diphosphorylase; SPTR: B9ZHL4 Thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase" /codon_start=1 /transl_table=11 /product="thiamine-phosphate diphosphorylase" /protein_id="YP_003828602.1" /db_xref="GI:302392782" /db_xref="GeneID:9514106" /translation="MEDWDLYLVTEEELSSGRCTLEVVKAAINGGVDLIQLRDKGKDL AYRYELGLKIRELTAEAGVDLIINNRVDLALALEADGVHLGQDDLPLKAAQKLLPEDK IIGISASTVEEALQAEAGGADYLGVGSIFATDSKDLKNDRSAVGLNRLAEIKSKVDIP VAAIGGLNQDNISEVIAAGADVISVISAVTQAEDIEWKTEELKGIIKEAKKGR" misc_feature complement(2141571..2142164) /locus_tag="Acear_2047" /note="Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-...; Region: TMP_TenI; cd00564" /db_xref="CDD:73367" misc_feature complement(order(2141619..2141630,2141682..2141684, 2141694..2141696,2141775..2141777,2141781..2141783, 2141802..2141804,2141808..2141810,2141859..2141861, 2141931..2141933,2142066..2142068,2142072..2142074, 2142153..2142155,2142159..2142161)) /locus_tag="Acear_2047" /note="thiamine phosphate binding site [chemical binding]; other site" /db_xref="CDD:73367" misc_feature complement(order(2141619..2141624,2141682..2141684, 2141772..2141777,2141781..2141783,2141859..2141861, 2141916..2141918,2141973..2141978,2142060..2142062, 2142066..2142068,2142072..2142074)) /locus_tag="Acear_2047" /note="active site" /db_xref="CDD:73367" misc_feature complement(order(2141772..2141774,2141859..2141861, 2141916..2141918,2141925..2141927,2141973..2141978, 2142060..2142062,2142066..2142068)) /locus_tag="Acear_2047" /note="pyrophosphate binding site [ion binding]; other site" /db_xref="CDD:73367" gene complement(2142182..2142973) /locus_tag="Acear_2048" /db_xref="GeneID:9514107" CDS complement(2142182..2142973) /locus_tag="Acear_2048" /EC_number="2.7.4.7" /note="COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399:IPR013749; KEGG: mta:Moth_0867 phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; SPTR: Q2RK55 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase" /codon_start=1 /transl_table=11 /product="phosphomethylpyrimidine kinase" /protein_id="YP_003828603.1" /db_xref="GI:302392783" /db_xref="GeneID:9514107" /translation="MKQVLTIAGSDSGGGAGIQADLKTMTRFKVYGASVITAVTAQNT LGVQGVKALNGSFVAQQLDSVVEDIDFAAVKTGMLANGEIINAVADKIEEYHLSNLVV DPVLVATSGDLLLAQEAISTLKEQLIPRAKVITPNLDEAKVLTGRKKTEQVSLKQLVK ELHQFGADYVLVKGGHSRDELARDLLYDGNDVIEFTAERIDTDDTHGTGCTLSAAIAS NLALGYGLAEAVKRSKDFITEAIRSGCQIGSGSNPVNHLIDYGEE" misc_feature complement(2142203..2142970) /locus_tag="Acear_2048" /note="bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed; Region: PRK06427" /db_xref="CDD:180561" misc_feature complement(2142242..2142967) /locus_tag="Acear_2048" /note="4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of...; Region: HMPP_kinase; cd01169" /db_xref="CDD:29353" misc_feature complement(order(2142779..2142784,2142794..2142796, 2142803..2142805,2142812..2142817,2142821..2142823, 2142827..2142832,2142845..2142859,2142866..2142868, 2142872..2142889,2142896..2142898,2142905..2142910, 2142917..2142919,2142929..2142931,2142935..2142940, 2142944..2142946,2142965..2142967)) /locus_tag="Acear_2048" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29353" misc_feature complement(order(2142344..2142346,2142740..2142742, 2142848..2142850,2142911..2142913,2142947..2142949)) /locus_tag="Acear_2048" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:29353" misc_feature complement(order(2142347..2142349,2142353..2142355, 2142455..2142457,2142554..2142556,2142665..2142667)) /locus_tag="Acear_2048" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29353" gene complement(2143244..2145721) /locus_tag="Acear_2049" /db_xref="GeneID:9514108" CDS complement(2143244..2145721) /locus_tag="Acear_2049" /note="COGs: COG1049 Aconitase B; InterProIPR018136:IPR015929:IPR000573:IPR001030:IPR 015928:IPR015933:IPR015931:IPR015932; KEGG: saf:SULAZ_1512 aconitate hydratase 2; PFAM: aconitase; aconitate hydratase domain protein; SPTR: C1DWJ2 Aconitate hydratase 2; PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2" /codon_start=1 /transl_table=11 /product="aconitase" /protein_id="YP_003828604.1" /db_xref="GI:302392784" /db_xref="GeneID:9514108" /translation="MEDKLKQILEGYKERALERKETYDLLPRPLTAKEVEGLIEGLKV DGLDMNKLIVRLLSEEVRRGTFPSSYVKAEGLAKVVKDEIESDYLSSREALELLADMN GGAATNELIDILKAGLFKEEITNILQNTVLVNEEEFSELAQMANQDKAAQRIIKSWAE REFAEDWQLENAYQGVSIKVGDNLTTGHLSPSKRADSRTDHPLHAQYIMEGREDEADF LDRLEDLKEQADNVIFVAGAALGEGSSRKSATYTMLQILGEPVDGEPEKKAGGVVVAK SFAPIFKNSLVASGMLPVECDTDVINEGDELKIDIEARKLIINGEQELDIKLPIQFKL NKIAAGGMTYFDAGNELQKWAVEYCRENGIDFDESKLPKGAQPEDEKPPQTLAQKIVG LNRLDGKETILPGETATVRIRGVYSQDTTGPMTLDEYQSMAGGDFGAEFVVQSLCHTG ECPSTEERDRHQFIDEFVTERGGVCLEPGEGIIHTIGNRFVLPTDVIVGGDSHTRTPR GVSFPAASDIVAGAMKYGKQDLTMDESVRVIFKGEPKKGITARDLVSTLVTYAEETVG KEIYNGRIIEMEGVEFLNSDERYILTNAVAERSASAGVIPSDETTLDRLEDNLEYLKS RPDADESPSVKNAIAAIEEFLTDPVLLEADENAEYAATIEIPLDEVEEPLVAKPHHPD NVAPLSEVAETELDEVFIGSCVGGDLEGIRAAAKIVDGYQVPHGVNFVVSPAARDIYN ELAADGSLAKLTEAGATVIMPGCGLCMGNKRRIGSGATALTTTTRNYQSRIGPADSKT YLGSAYVAAMAAVLGEIPTAEEYFEMF" misc_feature complement(2143247..2145700) /locus_tag="Acear_2049" /note="bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated; Region: PRK09238" /db_xref="CDD:181718" misc_feature complement(2144792..2145190) /locus_tag="Acear_2049" /note="Aconitase swivel domain. Aconitase (aconitate hydratase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. This is the aconitase swivel domain, which undergoes swivelling conformational change in the enzyme...; Region: Aconitase_swivel; cl00215" /db_xref="CDD:185833" misc_feature complement(2144984..2144992) /locus_tag="Acear_2049" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:73200" misc_feature complement(2143277..2144566) /locus_tag="Acear_2049" /note="Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle; Region: Aconitase; cl00285" /db_xref="CDD:185883" misc_feature complement(order(2143352..2143354,2143367..2143369, 2143421..2143423,2144216..2144221,2144459..2144461, 2144468..2144470)) /locus_tag="Acear_2049" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:153129" misc_feature complement(order(2143370..2143372,2143421..2143426, 2143433..2143435,2143613..2143615,2144213..2144215)) /locus_tag="Acear_2049" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:153129" gene complement(2145776..2147545) /locus_tag="Acear_2050" /db_xref="GeneID:9514109" CDS complement(2145776..2147545) /locus_tag="Acear_2050" /note="COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR001763:IPR013027:IPR004099:IPR016156; KEGG: hor:Hore_02400 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: B8D132 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain" /codon_start=1 /transl_table=11 /product="FAD-dependent pyridine nucleotide-disulfide oxidoreductase" /protein_id="YP_003828605.1" /db_xref="GI:302392785" /db_xref="GeneID:9514109" /translation="MGNKVLIVGGVAGGASTAARLRRMDEEAEIIIFEQGPHISFANC GLPYHIGKVIEEREKLLVQTPEAMEARFNVEVRIKNKVVKIDRANQELEVKDLESDET YREDYDYVVLSPGADPIKPPVPGVDGDRIFTLRNIPDTDEIKGYVDQHKPDSAVVVGG GYIGVEMAENLHERGLDVSIVELAPQVLGPLDREMAAQVHNHLRMKGIELYLDNGVAG LADQEDKKKVSLSNGEELTTDLVIMAAGVSPNTELAQKAGLEIGETGGIKVNDYLQTS DPNIYAIGDAIEVTDAVTSNPAYIPLAGPANKQGRIVANNLTGAKEKFPGSQGTAIAK VFDLTVAGTGNNEKQLTEADIDYEVSYINKKNHAGYYPGAVPMTLKILFTPDEGRLLG AQIVGYEGVDKRIDVLATAIRFEKTVFDLQDLDLAYAPPFGSAKDPVNMAGFAAGNIL NDKVDVIHWHQIDELADDAILLDVREEVEVKLGQIDGSVNIPLNSLRDRLEELDKSKE VVVYCAVGLRGYIGARILMQHGFENVKNLAGGYKLYSAVQKDEQGIIDDSTTPEGERL TSISNPEEGQQAEEEIEKTTSEL" misc_feature complement(2146217..2147488) /locus_tag="Acear_2050" /note="CoA-disulfide reductase; Region: CoA_CoA_reduc; TIGR03385" /db_xref="CDD:163244" misc_feature complement(2146841..2147086) /locus_tag="Acear_2050" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(2146241..2146558) /locus_tag="Acear_2050" /note="Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Region: Pyr_redox_dim; pfam02852" /db_xref="CDD:190451" misc_feature complement(2145911..2146126) /locus_tag="Acear_2050" /note="Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-...; Region: RHOD_Pyr_redox; cd01524" /db_xref="CDD:29087" misc_feature complement(2146007..2146009) /locus_tag="Acear_2050" /note="active site residue [active]" /db_xref="CDD:29087" gene complement(2147681..2147968) /locus_tag="Acear_2051" /db_xref="GeneID:9514110" CDS complement(2147681..2147968) /locus_tag="Acear_2051" /note="InterPro IPR001845:IPR011991; KEGG: aoe:Clos_0896 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: A8MEW4 transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="YP_003828606.1" /db_xref="GI:302392786" /db_xref="GeneID:9514110" /translation="MQDIEVDSELLCSKAKILKALSHPARLCIVKRLLKVDSCNVSDL QTCMEMPQSTVSQHLAKLRNAGIISGERNGVEINYSVVSDDAQGIINVLFE" misc_feature complement(2147714..2147917) /locus_tag="Acear_2051" /note="Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to...; Region: HTH_ARSR; cd00090" /db_xref="CDD:28974" misc_feature complement(order(2147771..2147773,2147864..2147866, 2147873..2147878,2147885..2147890,2147897..2147899, 2147906..2147908,2147912..2147917)) /locus_tag="Acear_2051" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:28974" misc_feature complement(order(2147732..2147740,2147753..2147761, 2147777..2147782,2147786..2147791,2147798..2147803, 2147807..2147818,2147843..2147851,2147891..2147899, 2147909..2147914)) /locus_tag="Acear_2051" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28974" misc_feature complement(order(2147840..2147842,2147849..2147851)) /locus_tag="Acear_2051" /note="putative Zn2+ binding site [ion binding]; other site" /db_xref="CDD:28974" gene complement(2148064..2149434) /locus_tag="Acear_2052" /db_xref="GeneID:9514111" CDS complement(2148064..2149434) /locus_tag="Acear_2052" /EC_number="2.1.1.35" /note="COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR001566:IPR010280:IPR002792:IPR016027; KEGG: hor:Hore_03000 RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (uracil-5)-methyltransferase; PRIAM: tRNA (uracil-5-)-methyltransferase; SPTR: B8D1I4 RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: TRAM domain; tRNA (uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA" /codon_start=1 /transl_table=11 /product="RNA methyltransferase, TrmA family" /protein_id="YP_003828607.1" /db_xref="GI:302392787" /db_xref="GeneID:9514111" /translation="MTESKPVTVGDRVVIELEDLAYGGDAVGRKDGFAIFVPQGVPGE IVNMEITQVKQSYAHGEIIEVVESAPERITGDCKVNGVCGGCQLQHIDYQAQLEYKQE MVKDNIERIGGLSDVDIKPVLGMEHPYFYRNKAQFPVGVKDEDVVTGFYAPGSHEIID TEECLIQHQLINRVISKAVELVEKHEISIYDEDSHSGLLRHLVVRVGVCTNQAMLVFV INGQRIPGQQRLAEELMAEIPELVSIQNNINRQKTNVILGAKTYSLAGESKIIDYIGS IRYQISAQSFFQVNTLQAKKLYDQILEYADLSGEETVVDAYCGIGSISLYLAQAAKQV YGIEVVSQAIDDAKENAELNNIDNCYFKVGKVRKILPKLKSNGLNPEVIVVDPPRKGC HEEVLETFLELKPERIIYVSCKPSSLARDLEQLTAADYEVEEIQPVDMFPQTYHIEAV AKIVRT" misc_feature complement(2149243..2149431) /locus_tag="Acear_2052" /note="TRAM domain; Region: TRAM; cl01282" /db_xref="CDD:120537" misc_feature complement(2148088..2149404) /locus_tag="Acear_2052" /note="SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]; Region: TrmA; COG2265" /db_xref="CDD:32446" misc_feature complement(2148196..2148501) /locus_tag="Acear_2052" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(2148277..2148279,2148337..2148345, 2148418..2148423,2148469..2148489)) /locus_tag="Acear_2052" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(2149534..2150529) /locus_tag="Acear_2053" /db_xref="GeneID:9514112" CDS complement(2149534..2150529) /locus_tag="Acear_2053" /EC_number="1.1.1.41" /note="COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR004434:IPR019818:IPR001804; KEGG: hor:Hore_08060 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: Isocitrate dehydrogenase (NAD(+)); SPTR: C6PZB2 Isocitrate dehydrogenase (NAD(+)); TIGRFAM: isocitrate dehydrogenase, NAD-dependent; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NAD-dependent, mitochondrial type; isopropylmalate/isohomocitrate dehydrogenases; isocitrate dehydrogenase, NADP-dependent, prokaryotic type" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase, NAD-dependent" /protein_id="YP_003828608.1" /db_xref="GI:302392788" /db_xref="GeneID:9514112" /translation="MKNVTLIPGDGIGPEVSQAVQKVIEAAGVEIEWEEANAGKGVME EYGTPLPDEVLDSVRKNKVALKGPITTPVGSGFRSVNVAIRKKLDLYTNLRPVKTYEG APTKFKDVDYVVFRENTEGLYAGIEHKVGEDAAESIKITTRQASERIVKAAFEYAQRE NRKLVTAVHKANIMKLSDGLFLEVAREVAEEYPEIEFNDRIVDNMCMQLVQYPEEYDV LVMPNLYGDVISDLGAGLIGGLGLTPGANIGDEIAVFEAVHGSAPDIAGENKANPIAL LLSGVLMLRHLKETDAADRIEAAVADVLAEGQTLTGDLGGNATTTEITEAIIDRL" misc_feature complement(2149579..2150520) /locus_tag="Acear_2053" /note="Isocitrate/isopropylmalate dehydrogenase; Region: Iso_dh; cl00445" /db_xref="CDD:193821" gene complement(2150557..2152005) /locus_tag="Acear_2054" /db_xref="GeneID:9514113" CDS complement(2150557..2152005) /locus_tag="Acear_2054" /EC_number="6.3.5.-" /note="COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); InterProIPR004413:IPR017958:IPR006075:IPR006107:IPR 018027:IPR003789; KEGG: hor:Hore_02340 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase; SPTR: B8D126 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B" /protein_id="YP_003828609.1" /db_xref="GI:302392789" /db_xref="GeneID:9514113" /translation="MLADYDITIGLEVHAQLDTETKIFCSCSTEFGAEPNVHTCPVCL GLPGVLPVLNKRAVEYAVKAGLALNCEIADFSKFDRKNYFYPDLPKAYQISQYDLPLC EDGYIDVEPEEGDAVRVGINRIHMEEDAGKLVHDGTITDSEGSLVDYNRVGTPLIEIV TEPDIESPAQAVAYLKKLKSILEYLEVSDCNMAEGSLRCDANASIKPKGEAELGVKTE LKNMNSFKAIEQALTYEIKRQKKILDSGKEVIQETRTWDPEAEKTYSMRGKEEAHDYR YFPEPDLVPLEIEQEWLEEIRETIPELPNVRRKRFIEELGLPEYDAQVLTDSKSIADF FEATVAEHNDPKSVSNWMMGDMMRLLNEEGLEIDEAEITPAGLAEMLELLDDGTISNK IAKTVFEEMFKTGKDPEDIVEDKGLKQISDEGELGNVIDEVIEDNPDAVEDYQGGKEQ AIGYLVGQVMQATRGKANPQLAKEMLREKLNQ" misc_feature complement(2150566..2152005) /locus_tag="Acear_2054" /note="aspartyl/glutamyl-tRNA amidotransferase subunit B; Validated; Region: gatB; PRK05477" /db_xref="CDD:180111" misc_feature complement(2151148..2151987) /locus_tag="Acear_2054" /note="GatB/GatE catalytic domain; Region: GatB_N; pfam02934" /db_xref="CDD:145865" misc_feature complement(2150566..2151006) /locus_tag="Acear_2054" /note="GatB domain; Region: GatB_Yqey; cl11497" /db_xref="CDD:159498" gene complement(2152029..2153486) /locus_tag="Acear_2055" /db_xref="GeneID:9514114" CDS complement(2152029..2153486) /locus_tag="Acear_2055" /EC_number="6.3.5.-" /EC_number="3.5.1.4" /note="COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR004412:IPR020556:IPR000120; KEGG: dae:Dtox_0765 glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; PRIAM: Amidase; SPTR: A4J6Z8 Glutamyl-tRNA(Gln) amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A" /protein_id="YP_003828610.1" /db_xref="GI:302392790" /db_xref="GeneID:9514114" /translation="MKLYELTAHELNERLIAGEVSAQEIVESVYQRIDEVEDDVQSYI TLTKDEALKQAKEVDEKLANGEEVNSLAGIPVAIKDNMCTKGVKTTCASNILHNFEPP YNATVVDKLNEVDTVMTGKTNLDEFAMGSSTENSGFFTTKNPWDLDYVPGGSSGGSAA AVAAGEAVISLGSDTGGSIRQPASLCGVVGMKPTYGFVSRYGLVAFASSLDQIGPFSR DVTDCALALNCLCGHDPQDSTSVEREVPDFTESLVDDVSDMKIGVPKEYFGEGIDGEV EEAVQSAIDKLEELGATCEEVSLPHTEYALPAYYLIAPAEASSNLARYDGVRYGYRNE EADGLVDMFKLTRSEGFGDEVQRRIMLGTYALSSGYYDAYYLKAQKVRTLIKQDFEEA FADYDVLISPTSPTTAFKIGEKSDDPLQMYMSDLCTIPANLAGLPGVSIPCGFDSAGL PIGLQILGDHFAEEKLIQVAYTFEQNTDFDTRAEL" misc_feature complement(2152038..2153486) /locus_tag="Acear_2055" /note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]; Region: GatA; COG0154" /db_xref="CDD:30503" misc_feature complement(2152065..2153444) /locus_tag="Acear_2055" /note="GGCT-like domains, also called AIG2-like family. Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is...; Region: GGCT_like; cl11426" /db_xref="CDD:196230" gene complement(2153510..2153806) /locus_tag="Acear_2056" /db_xref="GeneID:9514115" CDS complement(2153510..2153806) /locus_tag="Acear_2056" /EC_number="6.3.5.-" /note="COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; InterPro IPR003837; KEGG: chy:CHY_1101 glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; SPTR: Q3AD37 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C" /protein_id="YP_003828611.1" /db_xref="GI:302392791" /db_xref="GeneID:9514115" /translation="MKIDETTVEKVAMLARLELDEDKKEEMTEQLNDILEYADKLNEL DTEDVEPTAHALPIKNVFREDKVEESLDREAALKNAPEREDGSFKVPQIIDNDE" misc_feature complement(2153522..2153806) /locus_tag="Acear_2056" /note="Glu-tRNAGln amidotransferase C subunit; Region: Glu-tRNAGln; cl00495" /db_xref="CDD:186035" gene complement(2153932..2155947) /locus_tag="Acear_2057" /db_xref="GeneID:9514116" CDS complement(2153932..2155947) /locus_tag="Acear_2057" /EC_number="6.5.1.2" /note="COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); InterProIPR001679:IPR018239:IPR001357:IPR013839:IPR 004150:IPR004149:IPR000445:IPR010994:IPR016027:IPR012340:I PR013840:IPR003583; KEGG: amt:Amet_0942 NAD-dependent DNA ligase LigA; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; zinc-finger NAD-dependent DNA ligase C4-type; helix-hairpin-helix motif; BRCT domain protein; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; SPTR: B3K784 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; Helix-hairpin-helix motif; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent" /codon_start=1 /transl_table=11 /product="DNA ligase, NAD-dependent" /protein_id="YP_003828612.1" /db_xref="GI:302392792" /db_xref="GeneID:9514116" /translation="MAEDETLEQEMKKLINKLNKYNYHYYVLDDPLVSDKEYDQLYDR LVELEEETGKVLSGSPTQRVGAEPLDEFDSHQHLAPLWSLDKAQTGGELRDWDERIRR LIADYNREHPENPLPEPLYTVEYKFDGLTINLTYEEGELVQAATRGTGEVGEAILEQV KTIKTIPLQIPFKSGKLEVQGEGIMRLSVLEEYNQQAETPLKNARNAAAGALRNLDPK VTAERNLDAFFYSIGYYEGIEFDTHLEILDFLRENRFMVNDYLKTFDEIEDVIEEMET IEEKVDDLDYLVDGMVIKVNDLRTQEVLGYTARAPRWAIAYKFAAKEVTTTLLDVKWQ VGRTGKLTPVALLEPVDIEGATVSKATLNNWDDIQRKDVAKGCRVWLRRSNDVIPEII GRVETEEIEEVEEIAKPEECPDCGSSLVQDGVHLFCPNSLFCKPQLVARVAHFASRDA LEIETFSEKTAEKLYEELGLRDIADLYDIEYEELLELEGFGEQKAENLIDALEESKDV ELSSFIYGLGVPNVGTRTAELLADKFKSLERLMEADKEELVEINGIGEVVAEEIVDFF ADENIQGSIQRMLEAGVEPNYEAIEEVQEDSPFVDQTIVMTGSLPGLTRSEAKEKIKA LGGKVTSSVSGNTDILIVGENPGSKLDKARQLEIRIIEGEELIELLE" misc_feature complement(2153983..2155863) /locus_tag="Acear_2057" /note="NAD-dependent DNA ligase LigA; Validated; Region: ligA; PRK07956" /db_xref="CDD:181181" misc_feature complement(2154985..2155863) /locus_tag="Acear_2057" /note="NAD+ dependent DNA ligase adenylation domain. DNA ligases catalyze the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor, but using the same basic reaction...; Region: LIGANc; cd00114" /db_xref="CDD:29013" misc_feature complement(order(2155066..2155068,2155072..2155074, 2155258..2155260,2155402..2155404,2155507..2155509, 2155570..2155572,2155576..2155578,2155696..2155698)) /locus_tag="Acear_2057" /note="nucleotide binding pocket [chemical binding]; other site" /db_xref="CDD:29013" misc_feature complement(order(2155561..2155566,2155570..2155572)) /locus_tag="Acear_2057" /note="K-X-D-G motif; other site" /db_xref="CDD:29013" misc_feature complement(2155570..2155572) /locus_tag="Acear_2057" /note="catalytic site [active]" /db_xref="CDD:29013" misc_feature complement(<2154781..2154978) /locus_tag="Acear_2057" /note="NAD-dependent DNA ligase OB-fold domain; Region: DNA_ligase_OB; pfam03120" /db_xref="CDD:145978" misc_feature complement(2154223..2154411) /locus_tag="Acear_2057" /note="Helix-hairpin-helix motif; Region: HHH_2; pfam12826" /db_xref="CDD:193301" misc_feature complement(<2153998..2154147) /locus_tag="Acear_2057" /note="Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/...; Region: BRCT; cd00027" /db_xref="CDD:28909" misc_feature complement(order(2154064..2154066,2154070..2154072, 2154079..2154081,2154088..2154090,2154100..2154102)) /locus_tag="Acear_2057" /note="Dimer interface [polypeptide binding]; other site" /db_xref="CDD:28909" gene complement(2156078..2158201) /locus_tag="Acear_2058" /db_xref="GeneID:9514117" CDS complement(2156078..2158201) /locus_tag="Acear_2058" /EC_number="3.6.1.-" /note="COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR005751:IPR014016:IPR014017:IPR000212; KEGG: hor:Hore_02290 ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; SPTR: B8D121 ATP-dependent DNA helicase PcrA; TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase PcrA" /protein_id="YP_003828613.1" /db_xref="GI:302392793" /db_xref="GeneID:9514117" /translation="MEILDGLNPQQKKAVKHKDGPLLVLAGAGSGKTMVLTHRIAYLI QQCNVEPYNLLAVTFTNKAAEEMRERIEKLIAQDSEDIWMSTFHSIAVRILRREINKL GYDRNFTIYDTTDQQALIKDIIKNQLDLDPKQFKPRSVLNQISNAKNDLIDVSAFQQG VGSYFERVVGEIYESYQQQLKENNALDFDDLIMKTVELFEEYELVLEYYQNRFRYILV DEYQDVNHAQYRLINLLAEDHKNICVVGDDDQGIYGFRGADISNILDFEEDYSQTEII KLEQNYRSTERILDAAYEVVRNNRGRKPKKLWTENDQGAPIKQYKARGETEEAEYITE EIMKLREEEALDYDDFAVLYRTNAQSRVLEEVFRKQGIPYRIIGGLKFYERKEIKDIL AYLRVLYNPSDDICLQRIINVPKRGIGATTVGRLNNFAAQHNISLYEAVQRVEEIDSI NSRCSGQVRRFNELMSYFRQRADELNALELTKELLDETDYLKNLRQEDTDQARSRIEN IKELLTDIEEYIEQEGDITLGGYLEEVALITDVDNLEAEASAVVMMTLHSAKGLEFPV VFLSGMEEGLFPHSRSFDDKEAIEEERRLCYVGMTRAEEKLYLTHALSRKIYGQRSYN PVSRFIEEIPQQLFCTNEENEQQHSDKSQPEYTVGDQVKHPEWGTGRIVNTEASGQDL QVAVAFPDQGIKKLLVAYASLEKVN" misc_feature complement(2156090..2158195) /locus_tag="Acear_2058" /note="ATP-dependent DNA helicase PcrA; Region: pcrA; TIGR01073" /db_xref="CDD:162191" misc_feature complement(2156864..2158183) /locus_tag="Acear_2058" /note="UvrD/REP helicase; Region: UvrD-helicase; cl14126" /db_xref="CDD:196784" misc_feature complement(2156375..>2156689) /locus_tag="Acear_2058" /note="UvrD/REP helicase; Region: UvrD-helicase; cl14126" /db_xref="CDD:196784" gene 2158293..2158811 /locus_tag="Acear_2059" /db_xref="GeneID:9514118" CDS 2158293..2158811 /locus_tag="Acear_2059" /note="InterPro IPR017936:IPR000866:IPR012336:IPR012335; KEGG: bpu:BPUM_1274 stage IV spore cortex formation protein H; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: B4AEP6 Stage IV spore cortex formation protein H; PFAM: AhpC/TSA family" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen" /protein_id="YP_003828614.1" /db_xref="GI:302392794" /db_xref="GeneID:9514118" /translation="MKKIILVLLIIGLISGISTSLILTPKLFTQSKQQTELPDIEIKT ATNRTINLNTEIDRKTILLFWLPKSNICQQQLEILQQLKAEYQTELHIYGITIGNIQP TKLKKIKEENSLNFPLLIDRRTELTEELMINSIPTLVFINKQGIITEQHTGLLKLSNL KENIDNITTEKN" misc_feature 2158407..2158751 /locus_tag="Acear_2059" /note="TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing...; Region: TlpA_like_family; cd02966" /db_xref="CDD:48515" misc_feature order(2158497..2158499,2158506..2158508) /locus_tag="Acear_2059" /note="catalytic residues [active]" /db_xref="CDD:48515" gene complement(2158831..2160225) /locus_tag="Acear_2060" /db_xref="GeneID:9514119" CDS complement(2158831..2160225) /locus_tag="Acear_2060" /note="COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR017900:IPR006076:IPR001327; KEGG: hor:Hore_02150 FAD dependent oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; SPTR: B8D107 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase" /codon_start=1 /transl_table=11 /product="FAD-dependent pyridine nucleotide-disulfide oxidoreductase" /protein_id="YP_003828615.1" /db_xref="GI:302392795" /db_xref="GeneID:9514119" /translation="MSNLDKSYDLAIVGAGPAGIFTALELIKQDSGLDILILEKGSDI DSRSCPAKQEGINCVGCDNCSIVCGWGGAGAFSDGKLTLSPEIGGNLGDYIGQDKLTE LVDYVDQEYLKFGAPQKVYSASQEALEDIHSQATKAELEFIPSKIRHLGTGYSKEILT AMRDHLLENGVEIRIGAYVTEIMATDGQVEGVKLADGQKIAADNVVVAPGRENAEWLS QEAERMEIDTTINPVDIGVRVEVPSAVLEDLTDKVYESKFIYYNPSFDDKIRTFCMCP NGEVVSENNNGLITVNGHSHAEKKTDNTNFALLVSKTFTEPFKEPITYGKDIAKLANL LGGGILVQRLGDFLNGRRSTEKRIQRGLVEPTFKDATPGDLSLVLPYRHMTAIVEMLE ALDEITPGIYSRHTLLYGVEVKFYSSRLQVQDNLETKIDNLYTAGDGAGITRGLIQAS ASGVVIARDILAAD" misc_feature complement(2158843..2160216) /locus_tag="Acear_2060" /note="Uncharacterized FAD-dependent dehydrogenases [General function prediction only]; Region: COG2509" /db_xref="CDD:32579" misc_feature complement(<2160103..2160198) /locus_tag="Acear_2060" /note="hypothetical protein; Provisional; Region: PRK09897" /db_xref="CDD:182134" misc_feature complement(<2159602..>2159769) /locus_tag="Acear_2060" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" gene complement(2160305..2160976) /locus_tag="Acear_2061" /db_xref="GeneID:9514120" CDS complement(2160305..2160976) /locus_tag="Acear_2061" /note="COGs: COG2339 membrane protein; KEGG: hor:Hore_02140 predicted membrane protein; SPTR: B8D106 Predicted membrane protein; PFAM: Predicted membrane protein (DUF2324)" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="YP_003828616.1" /db_xref="GI:302392796" /db_xref="GeneID:9514120" /translation="MRAILILLVSLVPGIIWVYFFYRQDRYEPEPVRLVIKAFIYGGL AIIPVAIIEFPFADQLTATTNPVKLIFLAVVIVGLPEEFFKLSAVYYGFYNSDEFNEV MDGIIYSVSAGLGFAVIENLLYTVVFGYQVGMMRAFVTTLVHASFSGIAGYYLGLAKM EAESQLKLITIGLGQAVLLHGIYDFLVVSNLISMWGVVFLMLAFYVYLIKLIKKADAI SPFKP" misc_feature complement(2160341..2160976) /locus_tag="Acear_2061" /note="Membrane proteinase, regulator of anti-sigma factor [Posttranslational modification, protein turnover, chaperones]; Region: prsW; COG2339" /db_xref="CDD:32489" gene complement(2161048..2161314) /locus_tag="Acear_2062" /db_xref="GeneID:9514121" CDS complement(2161048..2161314) /locus_tag="Acear_2062" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828617.1" /db_xref="GI:302392797" /db_xref="GeneID:9514121" /translation="MRGELLVRVKLEIDDRKSVLDMIVQKDMTIGSLKDKMDMSPEAV DQVMVNGVRRSEYYSLNSGDWITFEIEGTTKGDSKQRELQSEMD" misc_feature complement(<2161102..>2161284) /locus_tag="Acear_2062" /note="Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes; Region: Motor_domain; cl00286" /db_xref="CDD:176419" gene complement(2161434..2162036) /locus_tag="Acear_2063" /db_xref="GeneID:9514122" CDS complement(2161434..2162036) /locus_tag="Acear_2063" /EC_number="2.7.1.25" /note="COGs: COG0529 adenylylsulfate kinase and related kinase; InterPro IPR002891; KEGG: pmo:Pmob_0712 adenylyl-sulfate kinase; PFAM: adenylylsulfate kinase; PRIAM: adenylyl-sulfate kinase; SPTR: A9BFU1 adenylyl-sulfate kinase; TIGRFAM: adenylylsulfate kinase; PFAM: adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK)" /codon_start=1 /transl_table=11 /product="adenylylsulfate kinase" /protein_id="YP_003828618.1" /db_xref="GI:302392798" /db_xref="GeneID:9514122" /translation="MKNSDSNSNIVWHEGKITYEDRCKNLEQKGIVVWFTGLSGSGKS TIAVEVERELIKTGKAVYRLDGDNIRHGLNSDLGFSEEDRNENIRRIAEVAALMKDAG LITLASFISPFQEMRKFACKKAGEENFIEVYVKADVETCAQRDPKGLYDKAKQGEIDN FTGISSPYEEPKNPELVIDTTKLSIQESVQKVLAEINDLV" misc_feature complement(2161497..2161943) /locus_tag="Acear_2063" /note="Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS). The end-product PAPS is a biologically 'activated' sulfate form important for the assimilation...; Region: APSK; cd02027" /db_xref="CDD:30200" misc_feature complement(order(2161551..2161556,2161605..2161607, 2161701..2161709,2161776..2161778,2161785..2161787, 2161800..2161802,2161827..2161829,2161902..2161913, 2161917..2161922)) /locus_tag="Acear_2063" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:30200" gene complement(2162075..2162818) /locus_tag="Acear_2064" /db_xref="GeneID:9514123" CDS complement(2162075..2162818) /locus_tag="Acear_2064" /note="COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901:IPR009036:IPR016040; KEGG: sru:SRU_2042 MoeZ/MoeB domain-contain protein; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; SPTR: Q2S0Y3 MoeZ/MoeB domain family; PFAM: MoeZ/MoeB domain; ThiF family" /codon_start=1 /transl_table=11 /product="UBA/THIF-type NAD/FAD binding protein" /protein_id="YP_003828619.1" /db_xref="GI:302392799" /db_xref="GeneID:9514123" /translation="MGDLNKEELKRYTRQINLEEIGRQGQQRLKESSILVVGAGGLGS AAIYYLAAAGIGRLGIIDYDEVEVSNLQRQILHTTADIGRNKVDSAKERIEELNPHLE VVTYDRRLTEDNGVDLVKEYDLVVDAVDNFTARYLVNDVCVEAGIPLVEAAVEQYEGQ LMLVDSSQGPCYRCIFPEKPKKPETEGVAILGITAGTIGTLQATEALKFILGIGETMI GKLLIYDGLDLSIRKIRVKKNPDCLVCNT" misc_feature complement(2162093..2162818) /locus_tag="Acear_2064" /note="molybdopterin biosynthesis protein MoeB; Provisional; Region: PRK05690" /db_xref="CDD:180204" misc_feature complement(2162111..2162788) /locus_tag="Acear_2064" /note="ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of...; Region: ThiF_MoeB_HesA_family; cd00757" /db_xref="CDD:30111" misc_feature complement(order(2162417..2162419,2162435..2162437, 2162561..2162563,2162600..2162602,2162627..2162629, 2162633..2162635,2162693..2162695,2162699..2162701, 2162705..2162707)) /locus_tag="Acear_2064" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:30111" misc_feature complement(order(2162114..2162119,2162123..2162125, 2162144..2162146,2162156..2162158,2162339..2162341, 2162345..2162347,2162357..2162362,2162414..2162416, 2162426..2162434,2162693..2162695)) /locus_tag="Acear_2064" /note="substrate interface [chemical binding]; other site" /db_xref="CDD:30111" gene complement(2162953..2163780) /locus_tag="Acear_2065" /db_xref="GeneID:9514124" CDS complement(2162953..2163780) /locus_tag="Acear_2065" /note="COGs: COG1464 ABC-type metal ion transport system periplasmic component/surface antigen; InterPro IPR004872; KEGG: hor:Hore_22280 NlpA lipoprotein; PFAM: NLPA lipoprotein; SPTR: C6Q7G1 Lipoprotein, YaeC family; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family" /codon_start=1 /transl_table=11 /product="NLPA lipoprotein" /protein_id="YP_003828620.1" /db_xref="GI:302392800" /db_xref="GeneID:9514124" /translation="MLKSRKVLTVIGLLLVVALAAGCGGNQTAEPQQEAEKTELVVGA TPVPHAEILTEIKPLLAEEGIELKIKEFTDYVTPNVALADGSIDANFFQHLPYLNDFK EERGLDLTYTTKVHIEPMGLYSEKIESLDEIEEGATIALPNDATNEGRALLLLAENGL IKLNEEAGVKATPVDIVENPKDLQFEELESAQLPRVLPDVTAAVINTNYALEGNLVPT EDAIIMEDSQSPYANVLAIRTEDKNKEALQKLTDVLTSEKVKKFINEEYGGSIVPTF" misc_feature complement(2162956..2163663) /locus_tag="Acear_2065" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(2163811..2164485) /locus_tag="Acear_2066" /db_xref="GeneID:9514125" CDS complement(2163811..2164485) /locus_tag="Acear_2066" /note="COGs: COG2011 ABC-type metal ion transport system permease component; InterPro IPR000515; KEGG: hor:Hore_22290 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A1HMH6 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_003828621.1" /db_xref="GI:302392801" /db_xref="GeneID:9514125" /translation="MNILLKQLVSDGALLWQGLYETIYMVLVSMGIATLFGIPLGVAV VVTEPDRVLENKKVNFVLGAIINVARSIPFIILMVAIIPVTRLLVGTSIGTTAAIVPL AVAAIPFIGRVVENSLKEVDPGVIEAAEAMGATPWEIIIKVLIPEALPSLILGLTLTI ISLIGFSAIVGAIGGGGLGDIAIRYGYQRFQGDIMLKTVVILVILVQVIQSIGNWLAN RLNRAA" misc_feature complement(<2164036..2164431) /locus_tag="Acear_2066" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cd06261" /db_xref="CDD:119394" misc_feature complement(order(2164066..2164068,2164117..2164119, 2164126..2164131,2164141..2164143,2164147..2164152, 2164159..2164161,2164162..2164167,2164240..2164242, 2164246..2164251,2164258..2164287,2164291..2164302, 2164330..2164332,2164366..2164371,2164378..2164383)) /locus_tag="Acear_2066" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(2164240..2164284) /locus_tag="Acear_2066" /note="conserved gate region; other site" /db_xref="CDD:119394" misc_feature complement(order(2164045..2164047,2164057..2164062, 2164078..2164116)) /locus_tag="Acear_2066" /note="ABC-ATPase subunit interface; other site" /db_xref="CDD:119394" gene complement(2164457..2165506) /locus_tag="Acear_2067" /db_xref="GeneID:9514126" CDS complement(2164457..2165506) /locus_tag="Acear_2067" /note="COGs: COG1135 ABC-type metal ion transport system ATPase component; InterProIPR017871:IPR003439:IPR017908:IPR018449:IPR 003593; KEGG: drm:Dred_2652 ABC transporter related; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; SPTR: A4J7V5 ABC transporter related; PFAM: ABC transporter; NIL domain" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003828622.1" /db_xref="GI:302392802" /db_xref="GeneID:9514126" /translation="MIEIKGLTKVYDSEEGEVVALKDINLEIDRDDIFGIIGPSGAGK STFIRCLNLLEEPTEGRMIIDGEDLTELNTGQLRQARKKIGMIFQNFNLLQSRTVADN VAFPLELADINKSEIDKKVTELLELVGLADKANNYPAQLSGGQQQRVGIARALANDPK LLLCDEATSSLDPETTDAILDLIKDINQQLGITVVLITHEMEVIKKICNKVAVLESGS IVEQGETMQIFINPEHKTTKRFVENIVNADIPEEFYQRSSVLEADADRLIKVSFIGES VGQPIISKVIKEFGVDANILYGNIDKIQEVHFGILLIELTGNDFQVKQTIDYLQQQDL QIEVIENEHSVKTVS" misc_feature complement(2164490..2165506) /locus_tag="Acear_2067" /note="DL-methionine transporter ATP-binding subunit; Provisional; Region: metN; PRK11153" /db_xref="CDD:183001" misc_feature complement(2164808..2165506) /locus_tag="Acear_2067" /note="MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein; Region: ABC_MetN_methionine_transporter; cd03258" /db_xref="CDD:73017" misc_feature complement(2165372..2165395) /locus_tag="Acear_2067" /note="Walker A/P-loop; other site" /db_xref="CDD:73017" misc_feature complement(order(2164910..2164912,2165009..2165014, 2165240..2165242,2165369..2165377,2165381..2165386)) /locus_tag="Acear_2067" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73017" misc_feature complement(2165240..2165251) /locus_tag="Acear_2067" /note="Q-loop/lid; other site" /db_xref="CDD:73017" misc_feature complement(2165057..2165086) /locus_tag="Acear_2067" /note="ABC transporter signature motif; other site" /db_xref="CDD:73017" misc_feature complement(2165009..2165026) /locus_tag="Acear_2067" /note="Walker B; other site" /db_xref="CDD:73017" misc_feature complement(2164991..2165002) /locus_tag="Acear_2067" /note="D-loop; other site" /db_xref="CDD:73017" misc_feature complement(2164904..2164924) /locus_tag="Acear_2067" /note="H-loop/switch region; other site" /db_xref="CDD:73017" misc_feature complement(2164490..2164717) /locus_tag="Acear_2067" /note="NIL domain; Region: NIL; pfam09383" /db_xref="CDD:192277" gene complement(2165782..2167023) /locus_tag="Acear_2068" /db_xref="GeneID:9514127" CDS complement(2165782..2167023) /locus_tag="Acear_2068" /note="COGs: COG1808 membrane protein; InterPro IPR013031:IPR005240; KEGG: hor:Hore_02040 conserved hypothetical protein TIGR00341; PFAM: conserved hypothetical protein; SPTR: B8D0Z7 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF389); TIGRFAM: conserved hypothetical protein TIGR00341; uncharacterized hydrophobic domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828623.1" /db_xref="GI:302392803" /db_xref="GeneID:9514127" /translation="MQIALATFKTGEGKEATQLLEALEVDIADYKLLSSPTGDLLIIN LLYGNTDIVLDNLAERFDFETDDDRSLIVFSPDTVIPFNKEKLQASSFKANRESLVTY ARNNSLIDDNFILLAIMAAVIASLGLILNNIPVIVGSMIIAPVFGPIVAIAIGIVLAD FKLMMQGVLSEATVLSIAVVVGLLMGLIVPNVVINSALKTRMFPTVADLFVALAAGSA GAYSLISGVKSQLIGVVIAAAIIPVMCTIGIGISLANSMMVGGGLLLLGGNYLALILA TVGVFYLKGLKPQIWYKFKAQKLVKKSLILIVVAVIILSLPLSWITYQRMIKEKPEDK VRKIYRKKFGDELETDLLSIQVQGKEVELFLYTPDETDEYFFKLLEKRIKEELGGEYR VIFEVVPTRRFQFPLGSDEKS" misc_feature complement(2166247..2166705) /locus_tag="Acear_2068" /note="Domain of unknown function (DUF389); Region: DUF389; cl00781" /db_xref="CDD:193936" gene complement(2167092..2167385) /locus_tag="Acear_2069" /db_xref="GeneID:9514128" CDS complement(2167092..2167385) /locus_tag="Acear_2069" /note="COGs: COG4496 conserved hypothetical protein; InterPro IPR013368:IPR000831:IPR010921; KEGG: hor:Hore_02030 TrpR like protein, YerC/YecD; PFAM: Trp repressor; SPTR: B8D0Z6 TrpR like protein, YerC/YecD; TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD; trp operon repressor, proteobacterial" /codon_start=1 /transl_table=11 /product="TrpR like protein, YerC/YecD" /protein_id="YP_003828624.1" /db_xref="GI:302392804" /db_xref="GeneID:9514128" /translation="MSSHLKDEFTDQLFTAVLALESNEEAYKFFEDICTINEIKALGQ RLQVAKMLDEGATYDKITETTGASTATISRVKRFLNYGAGGYQLILDRLEKNE" misc_feature complement(2167110..2167370) /locus_tag="Acear_2069" /note="Trp repressor protein; Region: Trp_repressor; cl01121" /db_xref="CDD:194043" gene complement(2167479..2167967) /locus_tag="Acear_2070" /db_xref="GeneID:9514129" CDS complement(2167479..2167967) /locus_tag="Acear_2070" /note="COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR020817:IPR008284:IPR001453; KEGG: hmo:HM1_0061 molybdenum cofactor biosynthesis protein, PFAM: molybdopterin binding domain; SPTR: B0TI13 Molybdenum cofactor biosynthesis protein, TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain" /codon_start=1 /transl_table=11 /product="molybdopterin adenylyltransferase" /protein_id="YP_003828625.1" /db_xref="GI:302392805" /db_xref="GeneID:9514129" /translation="MIKVGIITASDKGSRGEREDKSGQVIEEVIAEIEGEVVSYQVVP DEKEVLKAKMLKMVTEDGVDLLLTTGGTGLAPRDVTPDATLELIEREVPGIAEAMRME SLQVTDRAMLSRARAGVIKETLIVNLPGSPKAVQECLEVVIPALPHAVELIKDEVEDC AR" misc_feature complement(2167509..2167964) /locus_tag="Acear_2070" /note="MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea...; Region: MogA_MoaB; cd00886" /db_xref="CDD:58167" misc_feature complement(order(2167557..2167559,2167566..2167568, 2167578..2167583,2167659..2167661,2167749..2167757)) /locus_tag="Acear_2070" /note="MPT binding site; other site" /db_xref="CDD:58167" misc_feature complement(order(2167509..2167511,2167626..2167628, 2167635..2167637,2167665..2167670,2167677..2167679, 2167692..2167700,2167722..2167724,2167734..2167736, 2167740..2167745,2167749..2167751)) /locus_tag="Acear_2070" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:58167" gene complement(2167960..2168889) /locus_tag="Acear_2071" /db_xref="GeneID:9514130" CDS complement(2167960..2168889) /locus_tag="Acear_2071" /note="COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820:IPR005302:IPR011037:IPR015808; KEGG: fma:FMG_1429 molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; MOSC domain containing protein; SPTR: C2HHT0 Molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: MoaC family; MOSC domain; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein C" /protein_id="YP_003828626.1" /db_xref="GI:302392806" /db_xref="GeneID:9514130" /translation="MTTEEKSFTHFNESGRAQMVDVSDKPVTSRKAVAEGRVYTSPET IERIESDGIEKGDVMGVAQIAGIMNAKRTSEIIPMCHPLNITGVDLDFEINNEENYIR IVAEVKISSQTGVEMEALTAVSTAALTIYDMCKAVDKAMEIGEIRLLKKSGGQSGNFR RGKMSEIVAVSVSESKGEQKENVDSAVLKENHGLTGDAHAGDWHRQVSLLAQESIDKM NNQGLDVTAGDFAENLTTKDIDLLELDLGTRIEIGGQAVLEITQHGKECHDRCAVYEQ AGDCVMPREGIFAKVITGGEVKPGDKIEVLDND" misc_feature complement(2167966..2168874) /locus_tag="Acear_2071" /note="molybdenum cofactor biosynthesis protein MoaC/MOSC-domain-containing protein; Provisional; Region: PRK14499" /db_xref="CDD:184711" misc_feature complement(2168419..2168835) /locus_tag="Acear_2071" /note="MoaC family, prokaryotic and eukaryotic. Members of this family are involved in molybdenum cofactor (Moco) biosynthesis, an essential cofactor of a diverse group of redox enzymes. MoaC, a small hexameric protein, converts, together with MoaA, a...; Region: MoaC_PE; cd01420" /db_xref="CDD:29626" misc_feature complement(order(2168428..2168463,2168617..2168637, 2168644..2168721,2168824..2168835)) /locus_tag="Acear_2071" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:29626" misc_feature complement(order(2168470..2168478,2168659..2168673, 2168719..2168727)) /locus_tag="Acear_2071" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:29626" misc_feature complement(order(2168485..2168487,2168494..2168496, 2168527..2168529,2168536..2168544,2168551..2168553, 2168647..2168652,2168656..2168658,2168677..2168679, 2168725..2168727)) /locus_tag="Acear_2071" /note="putative active site [active]" /db_xref="CDD:29626" misc_feature complement(2167975..2168316) /locus_tag="Acear_2071" /note="MOSC domain; Region: MOSC; pfam03473" /db_xref="CDD:146227" gene complement(2168893..2169882) /locus_tag="Acear_2072" /db_xref="GeneID:9514131" CDS complement(2168893..2169882) /locus_tag="Acear_2072" /note="COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterProIPR013483:IPR000385:IPR007197:IPR010505:IPR 013785:IPR006638; KEGG: nth:Nther_1265 molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: B2A243 Molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum Cofactor Synthesis C; radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase subunit MoaA" /protein_id="YP_003828627.1" /db_xref="GI:302392807" /db_xref="GeneID:9514131" /translation="MEDKFGREIDYLRVSVTDRCNLRCFYCMPEDGIDLKTHDEILRY EELYDIIESAVKLGFKKIRLTGGEPLVRKGLVSFIEELEQLEIEDLALTTNGTLLAEY AAELKTAGLDRVNISLDTLQPGKFGEITCSDKYSLSDVIRGIKEAKKVGLTPVKLNVV LIKGVNDNEVEDFARMTLDHDITVRFIEVMPLGDNDKWAKEHYISIAEIKEGLNQLGS LIPVKEGIGNGPAKYYKLPNAVGKLGFISPISDHYCRSCNRIRLTADGFLKPCLLADK EFNIRKVIRSSSKSKNLMETLRQVVLVKPKQGLGDKVDTDFEVNKRQMSQIGG" misc_feature complement(2168896..2169882) /locus_tag="Acear_2072" /note="molybdenum cofactor biosynthesis protein A; Reviewed; Region: moaA; PRK00164" /db_xref="CDD:178909" misc_feature complement(2169301..2169843) /locus_tag="Acear_2072" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(2169307..2169312,2169403..2169405, 2169532..2169534,2169598..2169606,2169679..2169684, 2169688..2169690,2169799..2169807,2169811..2169813, 2169817..2169819,2169823..2169825)) /locus_tag="Acear_2072" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" misc_feature complement(2168962..2169339) /locus_tag="Acear_2072" /note="Molybdenum Cofactor Synthesis C; Region: Mob_synth_C; pfam06463" /db_xref="CDD:115139" gene complement(2169892..2171760) /locus_tag="Acear_2073" /db_xref="GeneID:9514132" CDS complement(2169892..2171760) /locus_tag="Acear_2073" /note="COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817:IPR005110:IPR001453:IPR005111; KEGG: drm:Dred_2878 molybdenum cofactor synthesis domain-containing protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; SPTR: A4J8H9 Molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain" /codon_start=1 /transl_table=11 /product="molybdenum cofactor synthesis domain protein" /protein_id="YP_003828628.1" /db_xref="GI:302392808" /db_xref="GeneID:9514132" /translation="MEKRNIYLDKLPLTEAKEIILNNLAGNYREATERVKVEDASGRV TAEAVYAEDSSPHYYAAAMDGFAVDVDKTFGASKRDPKELTIGQEAFFVDTGDAVPEG CNGVIMIEDVNQLDEATIEITASVAPGQHIRSIGEDILASQLLAPVNTKLGPSEIGGL LAGGITEIEVRKEPEVAILPTGTELVDPGSSLQPGEIVEYNSRVIASQIREWGAVPVK ADKVEDDYELIKNRVDRLSQQYDLVLIIAGSSAGAEDYTSQVIENLGELLFHGVAIKP GKPLMAGVINEKLVIGLPGYPVSAYLGTQLFVRPVIERLLGLTCSQPEKVKAELTQNL TSKLGEEEFVRVNVAHIDGDLKAVPLQRGAGVINSVMKSDGFIRIPALKQGMKQNKQV EVELRRDIDYNQNLLIAGEEDLAYELLCNQIKLQGVGLNLKFKNMASETAVDTLEQKA ANAALVKTVGMRQETVVVNLAVSEVGLVVRPDNSLGINGVEDLSQEGLSFVNQQQGRA ARRLLDSRLETAGINTQEIVGYRQEEITGRDAANLVKEGIIDVGLASRGVAELFNLDF ISLGQITSSLVILESEVEREELKKLLEVVRSNEYKSQLQKIAGYNTEDCGEIIDRK" misc_feature complement(2170051..2171754) /locus_tag="Acear_2073" /note="putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; Provisional; Region: PRK14498" /db_xref="CDD:184710" misc_feature complement(2170573..2171718) /locus_tag="Acear_2073" /note="MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and...; Region: MoeA; cd00887" /db_xref="CDD:58168" misc_feature complement(order(2170582..2170584,2170666..2170668, 2170783..2170785,2171152..2171154,2171161..2171163, 2171167..2171169,2171269..2171271,2171275..2171280, 2171287..2171289,2171293..2171304,2171347..2171349, 2171647..2171649)) /locus_tag="Acear_2073" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:58168" misc_feature complement(order(2171017..2171019,2171089..2171091, 2171209..2171211,2171215..2171220)) /locus_tag="Acear_2073" /note="putative functional site; other site" /db_xref="CDD:58168" misc_feature complement(order(2170855..2170857,2170864..2170866, 2170876..2170881,2171011..2171019)) /locus_tag="Acear_2073" /note="putative MPT binding site; other site" /db_xref="CDD:58168" misc_feature complement(2170048..>2170422) /locus_tag="Acear_2073" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cl11398" /db_xref="CDD:196214" gene complement(2171775..2172995) /locus_tag="Acear_2074" /db_xref="GeneID:9514133" CDS complement(2171775..2172995) /locus_tag="Acear_2074" /note="COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817:IPR005110:IPR001453:IPR005111; KEGG: drm:Dred_2879 molybdenum cofactor synthesis domain-containing protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: A4J8I0 Molybdopterin molybdochelatase; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain" /codon_start=1 /transl_table=11 /product="molybdenum cofactor synthesis domain protein" /protein_id="YP_003828629.1" /db_xref="GI:302392809" /db_xref="GeneID:9514133" /translation="MDFFELVTSKEAYQIIESNIKLNKKTEQIRVTEGLDRVAACDIL TAEDLPAFTKSTMDGYAVQAEDTFGASEEQPQTLDIIGEVEMGVKPELKLKAGQAVEI PTGGMIPDGADSVVMVEKTEAKADEVRVYTSVSPGANIVQKGSDIRQGETVVSADHRL RPQDVGALAGLGIAEIEVYKKPKVGIISTGNELISLDDELKPGQTRDINTYSLASLVE RTGAIPVQGGIIEDNAETLKQALVELADEVDFLVISGGSSVGVKDVTYNVLEEVGTTD VLIHGIAIKPGKPTLFTMLDDLPVYGLPGHPVSVMVTFKKFVAPYIKHQMGIEDSPST VKAEFEQNISSDPGREDYLRVTLQEGESGLVAKPVRGESSLIMTMVEADGLVKVPLAR EGLTAGEEVKVELF" misc_feature complement(2171778..2172995) /locus_tag="Acear_2074" /note="Molybdopterin biosynthesis enzyme [Coenzyme metabolism]; Region: MoeA; COG0303" /db_xref="CDD:30651" misc_feature complement(2171778..2172965) /locus_tag="Acear_2074" /note="MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and...; Region: MoeA; cd00887" /db_xref="CDD:58168" misc_feature complement(order(2171790..2171792,2171874..2171876, 2171991..2171993,2172363..2172365,2172372..2172374, 2172378..2172380,2172480..2172482,2172486..2172491, 2172498..2172500,2172504..2172515,2172558..2172560, 2172900..2172902)) /locus_tag="Acear_2074" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:58168" misc_feature complement(order(2172228..2172230,2172300..2172302, 2172420..2172422,2172426..2172431)) /locus_tag="Acear_2074" /note="putative functional site; other site" /db_xref="CDD:58168" misc_feature complement(order(2172060..2172062,2172069..2172071, 2172081..2172086,2172222..2172230)) /locus_tag="Acear_2074" /note="putative MPT binding site; other site" /db_xref="CDD:58168" gene complement(2173032..2173217) /locus_tag="Acear_2075" /db_xref="GeneID:9514134" CDS complement(2173032..2173217) /locus_tag="Acear_2075" /note="KEGG: nth:Nther_0445 hypothetical protein; SPTR: B2A5U8 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828630.1" /db_xref="GI:302392810" /db_xref="GeneID:9514134" /translation="MNEAERIEEIKDMINKEAVDGVITCAVAHKIAKKKKTSVRKVGE LVEELDIKIKECQLGCF" misc_feature complement(2173071..>2173217) /locus_tag="Acear_2075" /note="N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional; Region: PRK04338" /db_xref="CDD:179832" gene complement(2173585..2174901) /locus_tag="Acear_2076" /db_xref="GeneID:9514135" CDS complement(2173585..2174901) /locus_tag="Acear_2076" /note="COGs: COG2252 Permease; InterPro IPR006043; KEGG: tpd:Teth39_1718 xanthine/uracil/vitamin C permease; PFAM: xanthine/uracil/vitamin C permease; SPTR: C6PLS3 xanthine/uracil/vitamin C permease; PFAM: Permease family" /codon_start=1 /transl_table=11 /product="xanthine/uracil/vitamin C permease" /protein_id="YP_003828631.1" /db_xref="GI:302392811" /db_xref="GeneID:9514135" /translation="MERGFLDRFFKLQENNTTVKTEIIAGLTTFMTMAYIIIVNPMIL KDAGMPFEAVMAATVISAAAATLIMGLYANYPFGLAPGMGLNAFFAYTVVLGMGLSWQ AALAAVFISGIIFIIITVTGIRTAIVNAIPLSLKRAVSAGIGLFIALIGLQNAGVVVS SEATIITLAENLLEPNTLLALIGLLIIGILMARKVKGSILIGIILTTLIGIPMGIVKI EEGFTPFDLKLSLETFGAFTEGFPELFDFGMLNIILAFTFVDLFDTIGTLVGTSARAG MLDEDGKLPRVGKALMADSVGTTFGSMLGTSTVTTYVESTAGIMEGGRTGLTAVVVAV LFLASLIISPLVLLVPEAATAPALIIVGVLMMGAITDIDFEDFTEAFPAFMTIVMMPF AYSIAEGIAAGLIIYPVMKLISGRSDEVHPLVYVLALLFILRYAFM" misc_feature complement(2173588..2174901) /locus_tag="Acear_2076" /note="Sulfate transporter family; Region: Sulfate_transp; cl00967" /db_xref="CDD:193990" misc_feature complement(2173699..2174838) /locus_tag="Acear_2076" /note="Permease family; Region: Xan_ur_permease; pfam00860" /db_xref="CDD:189745" gene complement(2174944..2176494) /locus_tag="Acear_2077" /db_xref="GeneID:9514136" CDS complement(2174944..2176494) /locus_tag="Acear_2077" /EC_number="6.3.5.2" /note="COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterProIPR004739:IPR001674:IPR017926:IPR000991:IPR 018318:IPR014729:IPR011702:IPR006220:IPR001317; KEGG: ctc:CTC02409 GMP synthase; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; tRNA methyl transferase-like; SPTR: Q891G7 GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit" /codon_start=1 /transl_table=11 /product="GMP synthase (glutamine-hydrolyzing)" /protein_id="YP_003828632.1" /db_xref="GI:302392812" /db_xref="GeneID:9514136" /translation="MENKEKQELILVLDFGAQYSQLIARRVREANVYSRLLPYDVSVE RIKELNPDGIIFSGGPSSVYSEDAPYVEEEIFDLGIPILGICYGMQMMCHLLPGGEVE AADHREYGNAELTIKQGLDLLDGLGDELKCWMSHGDRVAEIPDGFEVIGYTDNSPVAA VGNSQRKFYGVQFHPEVVHTPRGREIIENFLFRVCNCSGNWTASNFIEEQIAKIKEEV GDSHVICGLSGGVDSSVAAALVHEAIGDQLTCIFVDHGLLRKNEAEEVKQTFGQEFDM NLISVDAQQRFFAKLEGVDDPEEKRKIIGNEFIEVFDEEAGKLGDIEYLVQGTIYSDV IESGGTDDSATIKSHHNVGGLPEDMNLKLIEPLRNIFKDEVREVGEELGIPAEIVWRQ PFPGPGLGIRVLGEVTPDKVTIVQEADAILREEIKKAGLNREIWQYFAALPPMRSVGV MGDERTYSYTIGIRAVKSKDAMTADWAKLPHELLEKISTRITNEVKEVNRVVYDITSK PPATIEWE" misc_feature complement(2174947..2176479) /locus_tag="Acear_2077" /note="GMP synthase; Reviewed; Region: guaA; PRK00074" /db_xref="CDD:178842" misc_feature complement(2175922..2176467) /locus_tag="Acear_2077" /note="Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase; Region: GATase1_GMP_Synthase; cd01742" /db_xref="CDD:153213" misc_feature complement(order(2175973..2175975,2176090..2176092, 2176234..2176239,2176315..2176323,2176441..2176446)) /locus_tag="Acear_2077" /note="AMP/PPi binding site [chemical binding]; other site" /db_xref="CDD:153213" misc_feature complement(order(2176234..2176236,2176318..2176320)) /locus_tag="Acear_2077" /note="candidate oxyanion hole; other site" /db_xref="CDD:153213" misc_feature complement(order(2175967..2175969,2175973..2175975, 2176237..2176239)) /locus_tag="Acear_2077" /note="catalytic triad [active]" /db_xref="CDD:153213" misc_feature complement(order(2175979..2175981,2176087..2176089, 2176225..2176227)) /locus_tag="Acear_2077" /note="potential glutamine specificity residues [chemical binding]; other site" /db_xref="CDD:153213" misc_feature complement(2174950..2175831) /locus_tag="Acear_2077" /note="The C-terminal domain of GMP synthetase. It contains two subdomains; the ATP pyrophosphatase domain which closes to the N-termial and the dimerization domain at C-terminal end. The ATP-PPase is a twisted, five-stranded parallel beta-sheet sandwiched...; Region: GMP_synthase_C; cd01997" /db_xref="CDD:30184" misc_feature complement(order(2175280..2175324,2175340..2175414, 2175427..2175456,2175478..2175525,2175541..2175654, 2175685..2175717,2175721..2175753,2175757..2175831)) /locus_tag="Acear_2077" /note="ATP Binding subdomain [chemical binding]; other site" /db_xref="CDD:30184" misc_feature complement(order(2175379..2175381,2175736..2175738, 2175742..2175744,2175796..2175807,2175811..2175819)) /locus_tag="Acear_2077" /note="Ligand Binding sites [chemical binding]; other site" /db_xref="CDD:30184" misc_feature complement(order(2174950..2175018,2175022..2175048, 2175067..2175114,2175124..2175156,2175163..2175192, 2175217..2175255)) /locus_tag="Acear_2077" /note="Dimerization subdomain; other site" /db_xref="CDD:30184" gene complement(2176761..2178410) /locus_tag="Acear_2078" /db_xref="GeneID:9514137" CDS complement(2176761..2178410) /locus_tag="Acear_2078" /note="COGs: COG0840 methyl-accepting chemotaxis protein; InterPro IPR004089:IPR003660:IPR013163:IPR004090; KEGG: dhd:Dhaf_0079 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: C1SND4 methyl-accepting chemotaxis protein; PFAM: Cache domain; HAMP domain; methyl-accepting chemotaxis protein (MCP) signaling domain" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer with Cache sensor" /protein_id="YP_003828633.1" /db_xref="GI:302392813" /db_xref="GeneID:9514137" /translation="MGNFKNLSLKKKILLGIGLSLLVSLLVIGSGILLKFNSFQETST KTLEKLLLNDEQMRIKDSVHTASQLMSDIYEENNDNLSQEELKELIVSTNNKVDFGEA GYYFIYNYEGEVVALPPTPDKQGTNRWDLQDANGKYFIRDIVNTAKAGGGFVDYIYEH PETGQEESKFAYIEPIEGTDWLIGSGAYESVINSKLTEPKKEISNFKSETLIFIGIIL VISLVVMFLIINWIANYIKRNLNPVLDGMHRLAAGDLQNKLEVNSQDELGNLAQQYND AVDQLNDLIRELLDNIEDLSAYSEELSASAQEGNATIETTNELVEDISASIEEISASA EEVTSFAQESSSKTEVGNDNIEETLISINEINQSIDEAVGIINELDNTSQEIDNIVEM ITNISEQTNLLALNAAIEAARAGEAGQGFAVVAEEIRELAEETNEATEQIASLIDKTQ SKTDTGLKAVKEVKEKATKSRKVATETGEVFEEIQNASNQTATQIEQTAGATQDLAKK SEQINTSTDDIQNMSNEVTASSQELANMAQRLQELVDKFKI" misc_feature complement(2177988..2178239) /locus_tag="Acear_2078" /note="Cache domain; Region: Cache_2; pfam08269" /db_xref="CDD:149365" misc_feature complement(2177562..2177771) /locus_tag="Acear_2078" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(2176767..2177477) /locus_tag="Acear_2078" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(2176764..2177378) /locus_tag="Acear_2078" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(2178643..2179710) /locus_tag="Acear_2079" /db_xref="GeneID:9514138" CDS complement(2178643..2179710) /locus_tag="Acear_2079" /note="COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006186:IPR006076:IPR013027; KEGG: amt:Amet_0927 FAD dependent dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: C6Q048 FAD dependent dehydrogenase" /codon_start=1 /transl_table=11 /product="FAD dependent oxidoreductase" /protein_id="YP_003828634.1" /db_xref="GI:302392814" /db_xref="GeneID:9514138" /translation="MNNIKVAVVGAGISGLTAAYKLEEKGINPTIFEKEHKVGARFVN GEAMMHIINLPITDVFYYLSLNRELPLQPTLPIRKIIFYGPTNKATIVGDIGYITIRG NHERSLENQLAKLVDSPINYNNKPDYQKLKREFDEVIIATGDPRTIKKIDQWQQTDVS VKIIGATIEGKFNPTTVKMWLNHNLAPQGYAYLLPFGHKLASIAIATPHDIVDSKHLW SNFLDQLDFEFRIKDTFQVDHYEIGQTKTQQFDNTYLIGHAGGFVMPFLGFGQFSSIE SGILVSQAITEGKDYNQLTDKLKKDYKVSLKLRKLFAKMSNNQYDKLVKALNNRVVKK MFLQRKINLAKIIGWLSTPLV" misc_feature complement(<2179594..2179698) /locus_tag="Acear_2079" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox; cl14644" /db_xref="CDD:197445" misc_feature complement(2178652..2179695) /locus_tag="Acear_2079" /note="Dehydrogenases (flavoproteins) [Energy production and conversion]; Region: FixC; COG0644" /db_xref="CDD:30989" gene complement(2179900..2180988) /locus_tag="Acear_2080" /db_xref="GeneID:9514139" CDS complement(2179900..2180988) /locus_tag="Acear_2080" /note="InterPro IPR004761; KEGG: nth:Nther_0873 spore germination protein; PFAM: spore germination protein; SPTR: B2A892 spore germination protein; TIGRFAM: spore germination protein; PFAM: spore germination protein; TIGRFAM: spore germination protein (amino acid permease)" /codon_start=1 /transl_table=11 /product="spore germination protein" /protein_id="YP_003828635.1" /db_xref="GI:302392815" /db_xref="GeneID:9514139" /translation="MFQDQEKISNNQALMLLLAAGIGNIFVVIAVPAVKDAGRDAWLA VLLAYSLAILLGLILIRLGLRFPDKTLVQYLPKVLGRIPGKLVGLIYILIFWSISALI YRETVELIELFMLETPPTPINIMMAILVIYIMRKGFEVFSRLTELLVPIILFLIIFSL VFIFPNLEWKRLTPLLENGLLPVVKSLKVQFPYAIETILFMAFWLPSLRKKDRLTKSL LVGMSIAGILLTILVGGIIAFSGTVMTVSFPFPVYYLSRYILLADFLTGFEAIFIILW LTSSFIEILVFFYPAVVGSAQWLGLKDYRPLIIPMTIITIALSLVPANLTDVLILDRL KNPYLLLPLGLLIPVTWLIAVVRGIDES" misc_feature complement(2180014..2180973) /locus_tag="Acear_2080" /note="Transmembrane amino acid transporter protein; Region: Aa_trans; cl00524" /db_xref="CDD:193853" gene complement(2181003..2182202) /locus_tag="Acear_2081" /db_xref="GeneID:9514140" CDS complement(2181003..2182202) /locus_tag="Acear_2081" /note="InterPro IPR008844; KEGG: dhd:Dhaf_0845 germination protein, Ger(X)C family; PFAM: spore germination B3 GerAC family protein; SPTR: Q24NX6 Putative uncharacterized protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family" /codon_start=1 /transl_table=11 /product="germination protein, Ger(x)C family" /protein_id="YP_003828636.1" /db_xref="GI:302392816" /db_xref="GeneID:9514140" /translation="MINNKYVLIIVLIIGLSFLPGCWSRVELDKRGIVSGIAIDKAKE EGKLKLTAEIIKPGKIKAPSSTGGGSGGSKEKAVWVVSSTGHTIFEAIRNFTMQVSRK LFWAHNRLIIISEDLAREGVYSVLDFFLRDQEGRARAWILISKGSEASEILKMKAELE KIPAKDIEELISARTVTSKAVAVDMHHFFLKLGSKTTSPVASRIEPIGQSKQDKKENK AKKVRLTGASVFKEDKLVGWLNRPATRGFLWITGEVESGIIVVKSPADNGKVSLEIVE TSSKIEAELKNGELVMNIQVDGESNLGDQSGSADLTRPARIEALERRMTAVIRNEIKE CLYKAQQEYKTDIFGFGEVVHRAFPDKWKKLKKNWEEIFPELKVKIDVEAKIRRPGII KESINSK" misc_feature complement(2181024..2182190) /locus_tag="Acear_2081" /note="Spore germination B3/ GerAC like, C-terminal; Region: Spore_GerAC; cl05194" /db_xref="CDD:195053" gene complement(2182192..2183814) /locus_tag="Acear_2082" /db_xref="GeneID:9514141" CDS complement(2182192..2183814) /locus_tag="Acear_2082" /note="InterPro IPR004995; KEGG: cac:CA_P0020 spore germination protein, GrkA; PFAM: GerA spore germination protein; SPTR: Q97TS7 spore germination protein, GRKA; PFAM: Bacillus/Clostridium GerA spore germination protein" /codon_start=1 /transl_table=11 /product="GerA spore germination protein" /protein_id="YP_003828637.1" /db_xref="GI:302392817" /db_xref="GeneID:9514141" /translation="MFSKLLRKLQFLKTANNSSEEIKPPFNLKPRNTGISKSLAKNYE KISDIFQDASDIVIREFSFGESQQDALLVHIEGMTEKNIINENILGSLMWEAKKTETD KKIEIESIKNSAMNVNDVTEVQTMEKAVEGILGGDTAFFMEGYDIALLMSTRTWEHRS VQKPQTEAKVRGPREGFTETLRVNTSLVRRKIKDPNLKMERMKIGRRTRTDTYLVYIK DIANDKIVEEVRRRLNRIEIDGILESGYIEEFIEDNPLSIFSTIGNTESPDKFAAKIL EGRIGILVDGTPFALTIPLLFIEHLQATEDYYSRPFLSTVSRLLRLLALHISLFGPAL YVALTSFHPAIIPTPLLVTISAAREGTPFPSFVEVLVMGIIFEILREAGVRLPRPVGQ AISIVGGLVLGDAAIKAGLVGAPVIIVVALTGITSFVVPPQADFLALLRIPMIFLAAS FGLFGIVWGYIFILIHLASLRSFGVPFMSPLMPFVWQDIKDTFIRAPWWKMNKRPRIL RWQNLQRDSVRVKSNLKPSPAQEENGGEDNDQ" misc_feature complement(2182288..2183691) /locus_tag="Acear_2082" /note="Bacillus/Clostridium GerA spore germination protein; Region: GerA; pfam03323" /db_xref="CDD:190601" gene complement(2184064..2185722) /locus_tag="Acear_2083" /db_xref="GeneID:9514142" CDS complement(2184064..2185722) /locus_tag="Acear_2083" /note="COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR001844:IPR018370:IPR002423; KEGG: hor:Hore_02010 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: B8D0Z4 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL" /codon_start=1 /transl_table=11 /product="chaperonin GroEL" /protein_id="YP_003828638.1" /db_xref="GI:302392818" /db_xref="GeneID:9514142" /translation="MVKELEFGEEGRRVLEEGVNKLAEAVKVTLGPKGRNVILEEGFG APTITNDGVTIAKEIDVKNPFEDLGAQTVKEVATKTNDVAGDGTTTATVLAQAIIQEG MKNVAAGANPMVLKKGIEKAVEQGVKEIRNLSTAIEDKESIAQVASISAADEEIGNLI ADAMEKVGKDGVISVEEGRTMGTSLETVEGMQFDRGYLSPYMATDQEEMKANLEDPYI LLTDQKISSVQDILPLLEKVAQEGKQLIIVAEDVEGEALATLVVNKIRGTFDCVAVKA PGFGDRRKAMLEDIAVLTGGQVITEDKGLQLENATKSMLGQARSITVTKDDTTIVDGA GADNDIQQRVEQLRRQIENTSSDFDREKLEERLAKLAGGVAVVRVGAATETELEEKKH RIEDALSATRAAVEEGIVPGGGTILIDVLQGLDDLELEGDEATGADIVRRALEAPLRL IADNAGHEGSVIAERVKNKDKGIGFDAYNGEFVDMIESGIVDPAKVTRSALQNAASAA AMLLTTETLIVEDEDEDNDGGGGAPAGAAGGGMPGGMGGMPGMM" misc_feature complement(2184235..2185665) /locus_tag="Acear_2083" /note="GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found...; Region: GroEL; cd03344" /db_xref="CDD:48161" misc_feature complement(2184235..2185659) /locus_tag="Acear_2083" /note="TCP-1/cpn60 chaperonin family; Region: Cpn60_TCP1; pfam00118" /db_xref="CDD:189400" misc_feature complement(order(2184355..2184357,2184571..2184573, 2184577..2184579,2184958..2184960,2185042..2185044, 2185138..2185140,2185498..2185500,2185507..2185509, 2185519..2185521,2185543..2185545,2185549..2185551, 2185579..2185581,2185585..2185590,2185603..2185605, 2185609..2185620,2185651..2185653)) /locus_tag="Acear_2083" /note="ring oligomerisation interface [polypeptide binding]; other site" /db_xref="CDD:48161" misc_feature complement(order(2184247..2184249,2184253..2184255, 2184370..2184372,2184484..2184486,2184535..2184537, 2185276..2185278,2185453..2185455,2185465..2185467, 2185627..2185635)) /locus_tag="Acear_2083" /note="ATP/Mg binding site [chemical binding]; other site" /db_xref="CDD:48161" misc_feature complement(order(2184331..2184333,2184340..2184345, 2184349..2184351,2184376..2184378,2184430..2184432, 2185399..2185401)) /locus_tag="Acear_2083" /note="stacking interactions; other site" /db_xref="CDD:48161" misc_feature complement(order(2184499..2184504,2184604..2184606, 2185150..2185152,2185171..2185173,2185303..2185305)) /locus_tag="Acear_2083" /note="hinge regions; other site" /db_xref="CDD:48161" gene complement(2185789..2186079) /locus_tag="Acear_2084" /db_xref="GeneID:9514143" CDS complement(2185789..2186079) /locus_tag="Acear_2084" /note="COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR020818:IPR011032:IPR001476; KEGG: dth:DICTH_0814 co-chaperonin GroES; PFAM: Chaperonin Cpn10; SPTR: A1HSU8 10 kDa chaperonin; PFAM: Chaperonin 10 Kd subunit" /codon_start=1 /transl_table=11 /product="Chaperonin Cpn10" /protein_id="YP_003828639.1" /db_xref="GI:302392819" /db_xref="GeneID:9514143" /translation="MEIKPLGDRVVVKDIEAEEETTESGIVLPESAKEEPQEGEVVAV GAGKKLDNGERLTMDVSEGDRVIYGKYAGTEIEFDGEEYLVISEKDVLAIVE" misc_feature complement(2185795..2186073) /locus_tag="Acear_2084" /note="Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts...; Region: cpn10; cd00320" /db_xref="CDD:73192" misc_feature complement(order(2185798..2185806,2185852..2185854, 2185858..2185860,2185873..2185875,2185903..2185905, 2185966..2185971,2186053..2186055,2186062..2186064, 2186068..2186070)) /locus_tag="Acear_2084" /note="oligomerisation interface [polypeptide binding]; other site" /db_xref="CDD:73192" misc_feature complement(order(2185984..2186019,2186023..2186028)) /locus_tag="Acear_2084" /note="mobile loop; other site" /db_xref="CDD:73192" misc_feature complement(order(2185909..2185911,2185942..2185944)) /locus_tag="Acear_2084" /note="roof hairpin; other site" /db_xref="CDD:73192" gene 2186415..2186702 /locus_tag="Acear_2085" /db_xref="GeneID:9514144" CDS 2186415..2186702 /locus_tag="Acear_2085" /note="COGs: COG3830 hypothetical protein; InterPro IPR002912; KEGG: drm:Dred_1671 hypothetical protein; PFAM: amino acid-binding ACT domain protein; SPTR: A4J546 hypothetical protein; PFAM: ACT domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828640.1" /db_xref="GI:302392820" /db_xref="GeneID:9514144" /translation="MEQEESNRIVITVLGEDKVGLVAKITGILAEHEANIIDITQTLL QDLFSMIMLVNIEELNTSFEELQQELKEAGEELNVKVKTQHEDVFRYMHRV" misc_feature 2186436..2186699 /locus_tag="Acear_2085" /note="ACT domain proteins similar to the yet uncharacterized Streptococcus pneumoniae ACT domain protein; Region: ACT_1ZPV; cd04872" /db_xref="CDD:153144" gene 2186728..2188089 /locus_tag="Acear_2086" /db_xref="GeneID:9514145" CDS 2186728..2188089 /locus_tag="Acear_2086" /note="COGs: COG2848 conserved hypothetical protein; InterPro IPR018201:IPR007841; KEGG: mbu:Mbur_0828 hypothetical protein; PFAM: protein of unknown function DUF711; SPTR: Q12XP4 UPF0210 protein Mbur_0828; PFAM: Uncharacterized ACR (DUF711)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828641.1" /db_xref="GI:302392821" /db_xref="GeneID:9514145" /translation="MLINPDEIIETIKMVEMENFDIRTVTMGINLRDCAHQDIEVLNQ NIYDKITKYAEDLVETAEEMELKYGLPIVNKRISVTPISIVAASCQTEDYSSIAATMD RAAKEVGVDFIGGFSALIHKGCTTGEGRLINSIPKALSITDRTCSSVNVATTKAGINM DAVLRMGEIVKETAELTTEDDAIGCAKLVVFANVPEDNPFMAGAFHGTGEPEAVINVG VSGPGVVKNVVDEIPDVNFDKLATTIKQTAFKITRMGELIGNSVSKALDIPFGIVDLS LAPTPAVGDSIANILESMGLEKCGTHGTTAALALLNDAVKKGGAMASSHVGGLSGAFI PVSEDQGMIEAAEAGALTLNKLEAMTSVCSVGLDMIAIPGSTTKETISAIISDEMAIG MINNKTTAVRIIPVPGKTVGDQVEFGGLLGKAPIMDVNQFESTDFVQRGGRIPAPLQA LGN" misc_feature 2186746..2187948 /locus_tag="Acear_2086" /note="Uncharacterized proteins with similarity to Ribonucleotide reductase and Pyruvate formate lyase; Region: RNR_PFL_like_DUF711; cd08025" /db_xref="CDD:153090" gene complement(2188093..2189445) /locus_tag="Acear_2087" /db_xref="GeneID:9514146" CDS complement(2188093..2189445) /locus_tag="Acear_2087" /note="COGs: COG0535 Fe-S oxidoreductase; InterPro IPR000385:IPR007197:IPR001478:IPR006638; KEGG: dae:Dtox_3511 radical SAM domain protein; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1TBZ1 Predicted Fe-S oxidoreductase; PFAM: radical SAM superfamily; protein of unknown function (DUF512)" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="YP_003828642.1" /db_xref="GI:302392822" /db_xref="GeneID:9514146" /translation="MDYSAKQLVLLSAQERNILPLTSCCNLDCIFCSHKYNPPEIETF KLGHRSLEEIKETAGFLDNKSRIVIGESITRIIEGEPFSHPDFREILIYLRNQFPQTK IQITTNGSYLSRKQVGLLAELGLIELNVSLNSAQPEIRKRLMADSAAEQVRQGIHNLA ESGIPYHGSIVALPQISGWDDIEETVSFLNQNQAQTVRIFLPGFTKLAPDRLQSGLDL WSELHDYIKQLNRTYRVPVTVEPPVVGELTPAVAGVIVNSPADRVGLQSGDEILEVDN NKVHTRVEAFYQLLQAKDPVVKYRHAGRSKKQKLNKLADEASGIVVDYDIAWQRLMEI KDIIAANSAEKVLFLTSVLAEDILRSGIERIESELDFMIEAEVLPVVNNFFGGSIRAA GLLVVDDFLEVIETKQEQVAERDLIFLPSEPFNQWGYDLVGRSFEELEESLDSKVILD " misc_feature complement(2188873..2189391) /locus_tag="Acear_2087" /note="Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster...; Region: Radical_SAM; cd01335" /db_xref="CDD:100105" misc_feature complement(order(2188933..2188935,2189053..2189055, 2189122..2189130,2189206..2189211,2189224..2189226, 2189347..2189355,2189359..2189361,2189365..2189367, 2189371..2189373)) /locus_tag="Acear_2087" /note="FeS/SAM binding site; other site" /db_xref="CDD:100105" misc_feature complement(2188555..>2188695) /locus_tag="Acear_2087" /note="PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated...; Region: PDZ; cl00117" /db_xref="CDD:193662" misc_feature complement(2188102..>2188443) /locus_tag="Acear_2087" /note="Protein of unknown function (DUF512); Region: DUF512; pfam04459" /db_xref="CDD:146883" gene complement(2189463..2190476) /locus_tag="Acear_2088" /db_xref="GeneID:9514147" CDS complement(2189463..2190476) /locus_tag="Acear_2088" /EC_number="3.4.24.57" /note="COGs: COG0533 Metal-dependent protease with possible chaperone activity; InterPro IPR017861:IPR000905; KEGG: hor:Hore_01980 metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: B8D0Z1 Putative metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: Glycoprotease family; TIGRFAM: metalloendopeptidase, , glycoprotease family" /codon_start=1 /transl_table=11 /product="O-sialoglycoprotein endopeptidase" /protein_id="YP_003828643.1" /db_xref="GI:302392823" /db_xref="GeneID:9514147" /translation="MENGLILGIESSCDETSAAVVKEGREVLSNVVASQVDWHRKFGG VVPEIASRKHVELINPVLEQALKEAEVSFEDLSAVAVTYGPGLVGGLLVGIAAAKSIA YAQQIPLLPINHIEGHIYSNFIAHKDLEAPLVCLTVSGGHTDLLYFKELGTYQILGRT RDDAAGEAFDKVAKVLELGYPGGPIIDSLVGEGDPTAIDFPRPLLTEDTYDFSFSGLK TAVLNYINNQQQRGEEINKADLAASFQQAVVDVLTARVIKAVKEKKVGKVILAGGVAS NSQLKAELEAKLAGLDVGLYYPPPKLCTDNAAMIASVGYYHYQQGIRGDYDLNAEPNL RLG" misc_feature complement(2189466..2190464) /locus_tag="Acear_2088" /note="UGMP family protein; Validated; Region: PRK09604" /db_xref="CDD:181984" misc_feature complement(<2190138..2190461) /locus_tag="Acear_2088" /note="Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]; Region: COG1214; cl14000" /db_xref="CDD:189252" gene complement(2190478..2190951) /locus_tag="Acear_2089" /db_xref="GeneID:9514148" CDS complement(2190478..2190951) /locus_tag="Acear_2089" /note="COGs: COG0456 Acetyltransferase; InterPro IPR006464:IPR000182:IPR016181; KEGG: bcb:BCB4264_A0291 ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: B5UWZ7 Ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase" /codon_start=1 /transl_table=11 /product="ribosomal-protein-alanine acetyltransferase" /protein_id="YP_003828644.1" /db_xref="GI:302392824" /db_xref="GeneID:9514148" /translation="MIFDPVDLVLQPMQLADLERVIEIEEESFGSPWSVESFKKELTK NRYAHYLVLKKGAELIGYIGIWIFISEGHITTLAIAPAYRRQGLAKYLLDRIVSSLAE SKVRKVTLEVRVSNQAARRLYRDYGFEEVGIKEDYYQNNQEDAVVMHKVLDKELD" misc_feature complement(2190508..2190903) /locus_tag="Acear_2089" /note="ribosomal-protein-alanine acetyltransferase; Region: rimI; TIGR01575" /db_xref="CDD:162430" misc_feature complement(2190619..2190804) /locus_tag="Acear_2089" /note="N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; Region: NAT_SF; cd04301" /db_xref="CDD:173926" misc_feature complement(order(2190682..2190687,2190715..2190723)) /locus_tag="Acear_2089" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene complement(2190941..2191651) /locus_tag="Acear_2090" /db_xref="GeneID:9514149" CDS complement(2190941..2191651) /locus_tag="Acear_2090" /note="COGs: COG1214 Inactive homolog of metal-dependent protease molecular chaperone; InterPro IPR000905; KEGG: hmo:HM1_1718 glycoprotease protein family member; PFAM: peptidase M22 glycoprotease; SPTR: C0GCU7 peptidase M22 glycoprotease; PFAM: Glycoprotease family" /codon_start=1 /transl_table=11 /product="peptidase M22 glycoprotease" /protein_id="YP_003828645.1" /db_xref="GI:302392825" /db_xref="GeneID:9514149" /translation="MLILAVDSSTSVGAVCLYKEEVIAEYNLNLDKTHSQRLMDQIVG IIDDAYLECSALEAIAVGVGPGSFTGIRIGLATAKSLAHALDIPVVGISTLEALANNL LHITEPICPMLDARRQRVYTAVYQEKDGLGLKEPVVAEDIKEVDSFLEELSKRFKQKI FFIGPGAEEYRELIEDRLGTQAEFSLENNLVQGKSLAQIGSIKLKTGGGDKLMDLKPN YLKRSQAERDWQVSKGDF" misc_feature complement(2190989..2191645) /locus_tag="Acear_2090" /note="Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]; Region: COG1214; cl14000" /db_xref="CDD:189252" gene complement(2191629..2192102) /locus_tag="Acear_2091" /db_xref="GeneID:9514150" CDS complement(2191629..2192102) /locus_tag="Acear_2091" /note="COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: tpd:Teth39_1745 hypothetical protein; PFAM: protein of unknown function UPF0079; SPTR: B0KBT7 Putative uncharacterized protein; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828646.1" /db_xref="GI:302392826" /db_xref="GeneID:9514150" /translation="MLKLITEQPKETIELGAKIGELLNSGDIICLQGNLGAGKTCLAK GLLAGLEVEAEVTSPTYTLINEYQGRLPAYHIDLYRISDYKELYDIGFEEYLYGEGVT IIEWPDKAGPLMPDSYLNITIKSQGDNRLIKIIPQANKYISLVSELKENVDLGGR" misc_feature complement(2191659..2192099) /locus_tag="Acear_2091" /note="Uncharacterised P-loop hydrolase UPF0079; Region: UPF0079; cl00520" /db_xref="CDD:186054" gene complement(2192193..2192699) /locus_tag="Acear_2092" /db_xref="GeneID:9514151" CDS complement(2192193..2192699) /locus_tag="Acear_2092" /note="COGs: COG4684 membrane protein; KEGG: hor:Hore_08330 predicted membrane protein; SPTR: B8CWC1 Predicted membrane protein; PFAM: protein of unknown function (DUF1393)" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="YP_003828647.1" /db_xref="GI:302392827" /db_xref="GeneID:9514151" /translation="MELDTQKITLVGILGAVTAILGMTPLGFVPVPTPAGSATIMHIP VVIGAILEGPLVGGLVGFVFGIFSFLRAGNPFVVDPLIGILPRIFIGVLAGYSYRLVK KESIAAGLAAAVGTLTNTIGVLGLAVWRGYLPSTAAVGIGITHGVPEVVVGVIITILV IKVLKNTG" misc_feature complement(<2192322..2192693) /locus_tag="Acear_2092" /note="Predicted membrane protein [Function unknown]; Region: COG4684" /db_xref="CDD:34301" gene complement(2192720..2194909) /locus_tag="Acear_2093" /db_xref="GeneID:9514152" CDS complement(2192720..2194909) /locus_tag="Acear_2093" /note="InterProIPR019734:IPR013026:IPR001440:IPR013105:IPR 011990; KEGG: TPR Domain containing protein; PFAM: hypothetical protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Q24FG4 TPR Domain containing protein; PFAM: Tetratricopeptide repeat; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828648.1" /db_xref="GI:302392828" /db_xref="GeneID:9514152" /translation="MRKLINLILVVLLCITINLPLAASEQKGSPDRIIKGILANFDQI KDFKGSLVSKIFLAEETVTYRTNIMKNQQRSLTDNSYTFGRIKGTASGRLLNAMPWIY LPPDYSLLQNALPLRGQRDYLEPLNNLEDIYNLKLLGETNLHNKPITLLELSNQFTRQ VIWVEKERLLIDKIEVFNGADQLVATINYNGYREVENEIWLPNLIIVENRNEEQILKI NYQNWVINDGLDNEDFAVGFTPKVRQKIFKLEKKVSADAGDTESRYRLAQLYYEVLET DKAVEMLKQAVEIKPKIKYYRKLAEFYREQSRYNKAIEAIKEALVLDYKRGELHYTLG ELHLQLQNIDQARSSLERAVNLAPTNKEYLERLFWTYRRSAVNDTMLENAQNTLDKLI DLAPNKAKYQIYSGDLYRKADKHHQAVHRYQRAIQITPEDSWGYIKLARSYEELDRYQ IAEQLYLKAVELEASWLNYEYLGDFYHSWKNYDSAVDNYQQALKLKPQQLDIRLKLGE SYWRANKQEQAVTIWKDILKIDNLKLDEYIEIAELFTDYELDNLAVSTYRQGIKEYSG SVDNWSKELLAKLHGRLARLYRKKQNYKLAAKEYQNSIQLHPYSWTYQELGSLKFHQG DLADAVELWQEVKRMDAGNLNAVYNLAIARIIQKDFTVAEDNLEYIKRFNPDQKLAQL VKQAEQVISSLKELELDDKQPGQKHRLEEDRLRQLGIKELIKEVDSR" misc_feature complement(2193833..2194120) /locus_tag="Acear_2093" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(2193890..2193895,2193902..2193907, 2193914..2193919,2193995..2194000,2194007..2194012, 2194016..2194021,2194103..2194108,2194115..2194120)) /locus_tag="Acear_2093" /note="binding surface" /db_xref="CDD:29151" misc_feature complement(order(2193851..2193853,2193860..2193862, 2193872..2193874,2193908..2193910,2193953..2193955, 2193962..2193964,2193974..2193976,2194010..2194012, 2194052..2194054,2194061..2194063,2194073..2194075, 2194109..2194111)) /locus_tag="Acear_2093" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature complement(2193416..2193694) /locus_tag="Acear_2093" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(2193434..2193436,2193443..2193445, 2193455..2193457,2193491..2193493,2193533..2193535, 2193542..2193544,2193554..2193556,2193590..2193592, 2193635..2193637,2193644..2193646,2193656..2193658, 2193692..2193694)) /locus_tag="Acear_2093" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature complement(order(2193473..2193478,2193485..2193490, 2193497..2193502,2193575..2193580,2193587..2193592, 2193596..2193601,2193686..2193691)) /locus_tag="Acear_2093" /note="binding surface" /db_xref="CDD:29151" misc_feature complement(2193224..2193508) /locus_tag="Acear_2093" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(2193269..2193274,2193281..2193286, 2193293..2193298,2193374..2193379,2193386..2193391, 2193395..2193400,2193485..2193490,2193497..2193502, 2193506..2193508)) /locus_tag="Acear_2093" /note="binding surface" /db_xref="CDD:29151" misc_feature complement(order(2193230..2193232,2193239..2193241, 2193251..2193253,2193287..2193289,2193332..2193334, 2193341..2193343,2193353..2193355,2193389..2193391, 2193434..2193436,2193443..2193445,2193455..2193457, 2193491..2193493)) /locus_tag="Acear_2093" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature complement(2192882..2193163) /locus_tag="Acear_2093" /note="Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...; Region: TPR; cd00189" /db_xref="CDD:29151" misc_feature complement(order(2192900..2192902,2192909..2192911, 2192921..2192923,2192957..2192959,2193002..2193004, 2193011..2193013,2193023..2193025,2193059..2193061, 2193101..2193103,2193110..2193112,2193122..2193124, 2193158..2193160)) /locus_tag="Acear_2093" /note="TPR motif; other site" /db_xref="CDD:29151" misc_feature complement(order(2192939..2192944,2192951..2192956, 2192963..2192968,2193044..2193049,2193056..2193061, 2193065..2193070,2193152..2193157)) /locus_tag="Acear_2093" /note="binding surface" /db_xref="CDD:29151" gene complement(2194935..2196134) /locus_tag="Acear_2094" /db_xref="GeneID:9514153" CDS complement(2194935..2196134) /locus_tag="Acear_2094" /EC_number="3.5.1.14" /note="COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650:IPR017439; KEGG: ava:Ava_2218 peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: Aminoacylase; SPTR: A1HTZ9 Amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain; TIGRFAM: amidohydrolase" /codon_start=1 /transl_table=11 /product="amidohydrolase" /protein_id="YP_003828649.1" /db_xref="GI:302392829" /db_xref="GeneID:9514153" /translation="MKDKIRQAISNLESDLIAWRRSIHRQPELGFEEYKTADKIVGIL QETGLDFQTEVAQTGVVADLQLGDDLPTLALRADMDALPIQEQTGVEYASQKEGVMHA CGHDGHVAILLGTAVILDQFRAELNINLRFIFQPAEEGPGGAKPMIEEGVLEDVAGII GLHLNTDQLTGELELKSGVVSAAADQIELVVTGEGGHGAAPHQTVDTVVVAAEIVTAL QTVVSRKVAPHHSVVLSMGKIEGGYRHNVIADQVKLTGTVRSTDPAVREELPDKIEEI IKGITTAHGADYELDYKRGYPVMISNDELVTGLEKSFSGLPEIKQVTKPDHPSMGAED FAYYCQQVPGAFYRLGAGKFPDCSYPGHHPKFNFDEAALELGVITFVEAVLNQSNSEG KDLIDIE" misc_feature complement(2194962..2196131) /locus_tag="Acear_2094" /note="Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]; Region: AbgB; COG1473" /db_xref="CDD:31662" misc_feature complement(2194980..2196089) /locus_tag="Acear_2094" /note="M20 Peptidase Aminoacylase 1 family; Region: M20_Acy1; cd03886" /db_xref="CDD:193507" misc_feature complement(order(2195049..2195051,2195646..2195648, 2195718..2195720,2195820..2195822,2195826..2195828)) /locus_tag="Acear_2094" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:193507" misc_feature complement(order(2195364..2195372,2195388..2195390, 2195394..2195399,2195409..2195429,2195478..2195480, 2195487..2195489,2195496..2195498,2195508..2195513, 2195577..2195579)) /locus_tag="Acear_2094" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:193507" gene complement(2196218..2196568) /locus_tag="Acear_2095" /db_xref="GeneID:9514154" CDS complement(2196218..2196568) /locus_tag="Acear_2095" /note="COGs: COG2337 Growth inhibitor; InterPro IPR003477:IPR011067; KEGG: hor:Hore_01740 transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein; SPTR: B8D0W7 transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein" /codon_start=1 /transl_table=11 /product="transcriptional modulator of MazE/toxin, MazF" /protein_id="YP_003828650.1" /db_xref="GI:302392830" /db_xref="GeneID:9514154" /translation="MAIKRGDVFYADLNPVVGSEQGGIRPVLVIQNDIGNKYSPTVIV AAITSKIKKGKLPTHVEIDSNEHNLDKDSVILLEQIRTIDKKRLRRQVTHLNEEIVKD VDEALEISVGLIDL" misc_feature complement(2196236..2196559) /locus_tag="Acear_2095" /note="PemK-like protein; Region: PemK; cl00995" /db_xref="CDD:194001" gene complement(2196571..2196846) /locus_tag="Acear_2096" /db_xref="GeneID:9514155" CDS complement(2196571..2196846) /locus_tag="Acear_2096" /note="InterPro IPR002145:IPR010985; KEGG: aoe:Clos_2274 CopG family transcriptional regulator; PFAM: CopG domain protein DNA-binding domain protein; SPTR: A8MJ25 Putative transcriptional regulator, CopG family; PFAM: Ribbon-helix-helix protein, copG family" /codon_start=1 /transl_table=11 /product="CopG family transcriptional regulator" /protein_id="YP_003828651.1" /db_xref="GI:302392831" /db_xref="GeneID:9514155" /translation="MTNLKRVMISLPDSLLEKVDGVAEQENQNRSEFVRKAMKLYIAE LRKEEIKQEMKQGYLEMGNINLEIAEDNIRIENRDFSKYEANIAECE" misc_feature complement(<2196619..2196846) /locus_tag="Acear_2096" /note="Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain [Transcription]; Region: NikR; COG0864" /db_xref="CDD:31204" gene complement(2197053..2197226) /locus_tag="Acear_2097" /db_xref="GeneID:9514156" CDS complement(2197053..2197226) /locus_tag="Acear_2097" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828652.1" /db_xref="GI:302392832" /db_xref="GeneID:9514156" /translation="MINWQDSDQHRAADVDSSVKDGLRISKMKQGYYEMGEINLKLAE EGLKAEEEAYKAI" gene complement(2197361..2199604) /locus_tag="Acear_2098" /db_xref="GeneID:9514157" CDS complement(2197361..2199604) /locus_tag="Acear_2098" /note="COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR004483:IPR005580; KEGG: hor:Hore_01710 DNA helicase; PFAM: DbpA RNA-binding domain protein; SPTR: B8D0W4 Putative DNA helicase; TIGRFAM: DNA helicase; PFAM: DbpA RNA binding domain; TIGRFAM: DNA helicase" /codon_start=1 /transl_table=11 /product="DNA helicase" /protein_id="YP_003828653.1" /db_xref="GI:302392833" /db_xref="GeneID:9514157" /translation="MINLVVENLPQYVGPGDIVGAFTNEVQMDGNKIGKIDFINGTAL VEVKEGIADKVVEVMDQNQVAGIEVKVYIDDDIRQKIDKINDYVTEFEQLVQMEREAE MKKHELEMKNLSGYEREEKGRAILHLRGRDQGEAFGGKKVVKFMRQRRGEELPDSEIS VGDLVMLSKNQPLRDDNPTGTVAEKTKYSITVVFDENPPGFIFGKGLRADLYVNDITF QRMLDAITEVEEAEGRLAELRDKFLGLEDIEFAEQDSDVEFKNQNLNQSQKQAVRQAM AAEDFFLVHGPPGTGKTMTSIEIIRQEIGPDKNILATADSNTAVDNLVERLVRDDVEV VRVGHPVRVTPVLREHTLDYLIEDHPKYQESLKLRQEADELLDKQDDLTHPSGRWRRG MSNQQIREQAQQGSGARGVPLDKIKEMAEWLELQEEIDDLFAEMDQLEEEAVNDLLST ADVVCTTNSTAGSEVLDNFWADLLVVDEATQATEPAVLIPLTKTDRVVLAGDHKQLPP TILSERAKQQGLNYTLFERLIDMYGAKIRQMLRVQYRMNDLIMNFSNREFYNGLLESA DGIGGHTLADLDVSAPNGSRPAEKALVFDQPIAFFDTQGMNAPERSKSDSTSVENPIE ADLVIEIAEVAKQLDFAEEDIAVIAPYKDQVELIDDKLDLQGVEVNTVDGFQGREKEV IILSFVRSNEYGNIGFLRDLRRLNVSLTRAKRKLIMIGDASTITSNEVYERLIEYVTD EGYYYAL" misc_feature complement(2199392..2199568) /locus_tag="Acear_2098" /note="DbpA RNA binding domain; Region: DbpA; pfam03880" /db_xref="CDD:146487" misc_feature complement(2197373..2199316) /locus_tag="Acear_2098" /note="DNA helicase, putative; Region: TIGR00376" /db_xref="CDD:188047" misc_feature complement(<2198654..2198818) /locus_tag="Acear_2098" /note="DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region; Region: DEXDc; cl14882" /db_xref="CDD:197446" gene complement(2199709..2200374) /locus_tag="Acear_2099" /db_xref="GeneID:9514158" CDS complement(2199709..2200374) /locus_tag="Acear_2099" /note="COGs: COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis; InterPro IPR002818; KEGG: sat:SYN_01335 isoprenoid biosynthesis protein with amidotransferase-like domain; PFAM: ThiJ/PfpI domain protein; SPTR: Q1K1X2 ThiJ/PfpI; PFAM: DJ-1/PfpI family" /codon_start=1 /transl_table=11 /product="ThiJ/PfpI domain protein" /protein_id="YP_003828654.1" /db_xref="GI:302392834" /db_xref="GeneID:9514158" /translation="MAKVGVLLSGCGVQDGSEIHEAVLTMLHLDKNGQEIIPIAPNIL QSQVIDHLTGDEMERENRDVLVEAARIARGDIRTIKAEVTDQLDGLILPGGAGAVKNL TNYALMPEECKINQQTEQLIIEMIETNRPVGAICIAPLVVARALADTDQQPKVTVGAA SEPAKYIEDKLDAVHVEAAVDEVVVDDELKILTTPAYMLAESIAEAEEGIAKLVARMA DLI" misc_feature complement(2199712..2200365) /locus_tag="Acear_2099" /note="Type 1 glutamine amidotransferase (GATase1)-like domain; Region: GAT_1; cl00020" /db_xref="CDD:193615" misc_feature complement(2199967..2199969) /locus_tag="Acear_2099" /note="conserved cys residue [active]" /db_xref="CDD:153222" gene complement(2200385..2200831) /locus_tag="Acear_2100" /db_xref="GeneID:9514159" CDS complement(2200385..2200831) /locus_tag="Acear_2100" /note="COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644:IPR013785; KEGG: swo:Swol_1883 CBS domain-containing protein; PFAM: hypothetical protein; SMART: hypothetical protein; SPTR: Q0AVS3 hypothetical protein; PFAM: CBS domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828655.1" /db_xref="GI:302392835" /db_xref="GeneID:9514159" /translation="MLAEDIMTEDVITVNQDDTIKDVARLLSDNEISGLPVINDDGEV VGIITEQDLIIRDKKLHFPDYIYLLDSIIYLESLREFEEEFKKMIGTQVEEVMTEEVI TVNQETPTDEIVELMLEHKINRVPVIDNGELVGIISRGDLVKLLAD" misc_feature complement(2200403..2200822) /locus_tag="Acear_2100" /note="FOG: CBS domain [General function prediction only]; Region: COG0517" /db_xref="CDD:30863" misc_feature complement(2200400..2200810) /locus_tag="Acear_2100" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. BON is a putative phospholipid-binding domain found in a family of osmotic shock protection...; Region: CBS_pair_BON_assoc; cd04586" /db_xref="CDD:73086" gene complement(2200839..2202389) /locus_tag="Acear_2101" /db_xref="GeneID:9514160" CDS complement(2200839..2202389) /locus_tag="Acear_2101" /note="COGs: COG0063 sugar kinase; InterPro IPR004443:IPR000631:IPR017953; KEGG: pth:PTH_0657 carbohydrate kinase; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; SPTR: A5D4H8 Predicted carbohydrate kinase; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein N-terminus; carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region" /codon_start=1 /transl_table=11 /product="carbohydrate kinase, YjeF related protein" /protein_id="YP_003828656.1" /db_xref="GI:302392836" /db_xref="GeneID:9514160" /translation="MEVVTAQQMQQIDKRTIEELGIPGVVLMENAGRAVVDTAWEMLD YNQEAEVVILAGGGNNGGDGFVAARLLDDLGVETEVLLVGESEAVSGDAEVNLNILQK LDYEVRELQTEDDLEQAADLLAGADLVIDALLGTGIKGDLRGLFPDLIGLINESEIPV LAVDIPSGLDAETGQPHGRAVKADVTLTFALPKLGLVVYPGSEYAGRLEVADISIPDK AVEAQQIKREWITADLARDFLPKRASCSHKGSFGQAAVIAGSEGMTGAAKLSSLAVLK SGAGIATLGVPKTLHSILEEKLTEVMTKPLPETRDSCLSLNSFAGIKALSREADVMAV GPGMSRSTEITYILHDILGELELPLVIDADGINAVTDLDLLADRKAPTVLTPHPGEMA RLVGTSVAEIEADRIKTAAKWAKDLEVTIVLKGAATVIATADGRAYINSTGNSGLATA GSGDVLTGIITGLMAQGLTADEAAVLGVFLHGLTADLALEEETTYTLLAGDLIDNLAQ AFRYLQEE" misc_feature complement(2201763..2202389) /locus_tag="Acear_2101" /note="YjeF-related protein N-terminus; Region: YjeF_N; cl00318" /db_xref="CDD:193767" misc_feature complement(2200944..2201654) /locus_tag="Acear_2101" /note="B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily; Region: YXKO-related; cd01171" /db_xref="CDD:29355" misc_feature complement(order(2201028..2201030,2201037..2201039, 2201583..2201585)) /locus_tag="Acear_2101" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:29355" misc_feature complement(order(2200944..2200946,2201022..2201024, 2201031..2201036,2201118..2201120,2201229..2201231)) /locus_tag="Acear_2101" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:29355" gene complement(2202414..2202788) /locus_tag="Acear_2102" /db_xref="GeneID:9514161" CDS complement(2202414..2202788) /locus_tag="Acear_2102" /note="COGs: COG0736 phosphopantetheinyl transferase (holo-ACP synthase); InterPro IPR002582:IPR004568:IPR008278; KEGG: dae:Dtox_3772 holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: C1TER3 phosphopantethiene--protein transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase" /codon_start=1 /transl_table=11 /product="holo-acyl-carrier-protein synthase" /protein_id="YP_003828657.1" /db_xref="GI:302392837" /db_xref="GeneID:9514161" /translation="MVTGIGVDIIEVARIKDGWEKYQDRFLDRLFTSEEVDYCLQRSS PEVHLAARFAAKEAVVKAFGTGLRGMKWTEIEVVNDQSGRPEIKLHNQAELLAKELEI REVLISLSHTKQQAIAYATALA" misc_feature complement(2202429..2202788) /locus_tag="Acear_2102" /note="4'-phosphopantetheinyl transferase superfamily; Region: ACPS; cl00500" /db_xref="CDD:193842" gene complement(2202952..2204541) /locus_tag="Acear_2103" /db_xref="GeneID:9514162" CDS complement(2202952..2204541) /locus_tag="Acear_2103" /note="COGs: COG0840 methyl-accepting chemotaxis protein; InterPro IPR008611:IPR004089:IPR003660:IPR004090; KEGG: hha:Hhal_0167 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: C6QQQ6 methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; methyl-accepting chemotaxis protein (MCP) signaling domain" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer" /protein_id="YP_003828658.1" /db_xref="GI:302392838" /db_xref="GeneID:9514162" /translation="MRLNLRKKLLGGFGIVLILMIILGGVLFYSLNLIEDENRVLEQN MEQHSFFQEKELDHVVWVNQLSNTLLTEEKFEGELNPTECSFGNWYYSLLESERYDRL PAEVKEIIQNLEAPHKKLHQSAKEIKSIFAEYGYDSEEGRRLALEVYQTETLKQLDKI EHYFEQYQSYLTKQQNQARSTVERHTLFANRTGIILLIVTVIIGVIVALAINKRITYP IIKAEEFAEKIAAGDLDIDSLEVENDDEIGVLANSLNQMQANLQELVADLIDTIEELT AYSEELTASAQEGNATIETTNELIENISASIQQISAGAEEVASFANEADTKTESGSEN IQDALESMADIRNSVEGTVDIIEELDAYSKEIGQIINLITDISEQTNLLALNAAIEAA RAGEAGQGFSVVAEEIRQLAEETNEATERIAELINKTQQKADVGLEAVQEVETKVAKG QEIIDKTGDVFGEIKDNSKATALQIEDTADAAQQLAESSDEVNQAAQDIGNMSDEIAA SSQELANMSQDLERLVNKFNV" misc_feature complement(2203753..>2203905) /locus_tag="Acear_2103" /note="Methyl-accepting protein, and Phosphatase (HAMP) domain. HAMP is a signaling domain which occurs in a wide variety of signaling proteins, many of which are bacterial. The HAMP domain consists of two alpha helices connected by an extended linker. The...; Region: HAMP; cl01054" /db_xref="CDD:194021" misc_feature complement(2202958..2203707) /locus_tag="Acear_2103" /note="Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer); Region: MA; smart00283" /db_xref="CDD:128579" misc_feature complement(2202955..2203560) /locus_tag="Acear_2103" /note="Taxis toward Aspartate and Related amino acids and Homologs (TarH). The Tar chemoreceptor of Escherichia coli mediates attractant responses to aspartate, maltose, and phenol, repellent responses to Ni2+ and Co2+, and thermoresponses. These...; Region: TarH; cl00144" /db_xref="CDD:193677" gene complement(2205444..2206280) /locus_tag="Acear_2104" /db_xref="GeneID:9514163" CDS complement(2205444..2206280) /locus_tag="Acear_2104" /EC_number="2.7.7.49" /note="COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477; KEGG: lrf:LAR_1270 reverse transcriptase/maturase family protein; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); PRIAM: RNA-directed DNA polymerase; SPTR: Q64E53 Prophage LambdaSa1 transcriptase/maturase family protein; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase)" /codon_start=1 /transl_table=11 /product="RNA-directed DNA polymerase" /protein_id="YP_003828659.1" /db_xref="GI:302392839" /db_xref="GeneID:9514163" /translation="MVSCEERIGELVTRRTYYTLKDKIVTKVNLHLAAQTVIANGGSA GVDGVTIEEFCDNYQQNMRELYRQLQEDRYESSPVLRVMIPKGDGRERPLGIPTVKDR IAQAAVKRKIEPIFEKIFCDCSYGFRPGRSQMDAINKVEEYKEEGYKWVLDADIKGYF DNINQDLLMEFITERINDGWVLRMIKSWLTAGVMTEEGYIPSKQGTPQGGVISPLLAN IYLHQLDKIMTKRGYKIVRFADDFVILTKSKKKAIKHQNKRIPNAVLRQKGLKSLLTT LS" misc_feature complement(2205507..2206040) /locus_tag="Acear_2104" /note="RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable...; Region: RT_G2_intron; cd01651" /db_xref="CDD:73157" misc_feature complement(order(2205558..2205563,2205567..2205569, 2205654..2205659,2205801..2205818)) /locus_tag="Acear_2104" /note="putative active site [active]" /db_xref="CDD:73157" misc_feature complement(order(2205561..2205563,2205657..2205659, 2205801..2205818)) /locus_tag="Acear_2104" /note="putative NTP binding site [chemical binding]; other site" /db_xref="CDD:73157" misc_feature complement(2205654..2205656) /locus_tag="Acear_2104" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:73157" gene complement(2207126..2208958) /locus_tag="Acear_2105" /db_xref="GeneID:9514164" CDS complement(2207126..2208958) /locus_tag="Acear_2105" /EC_number="2.6.1.16" /note="COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR005855:IPR017932:IPR000583:IPR001347; KEGG: dae:Dtox_0606 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; SPTR: C1TG61 glutamine--fructose-6-phosphate transaminase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: SIS domain; glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)" /codon_start=1 /transl_table=11 /product="glutamine--fructose-6-phosphate transaminase" /protein_id="YP_003828660.1" /db_xref="GI:302392840" /db_xref="GeneID:9514164" /translation="MCGIVGYIGDKDASSILMAGLNKLEYRGYDSAGIALYQQDQIEV CKRVGKLDNLEELVADKDPQGQVGIGHTRWATHGKPSTPNAHPHTGCEGEFVIVHNGI IENYLSLKEELLQQGHDFSSETDTEVLVHLLEEHYTGDLAETVRRVAAKLEGSYAFVA LTVNEPDRLIAVRQDSPLIVGLNDGEYFVASDIPAILEHTDEVYILDDGEMAVVTKAG VNLSTIEGEPVDKDIFTVDWNPGMAEKAGYDHFMLKEIHEQPEALRRAISGRLSIDNQ EVILDELKLSSEELAGYERIYIVACGTAYHSGLVAKYLIEDLVKIPVEVDIASEFRYR DPLVSQDTLVIVVSQSGETADTLAAVREAQDKGARVLAISNVVGSTIPREADDVIYIH AGPEIAVASTKAYINMLMVFYLLAIRLAQIKESISQEKAVELIADLKNIPNQAAQIIK DSEELFKEFAGDYAEHENAFFIGRGLDYAVALEGALKLKEISYLHAASYPAGELKHGT LALIEEDVPVVALATQKSVLDKTLSNIQEVQARGASVTGVVLNKKEEVVDALDHVIEI PETEELLTSILTVIPLQLLAYYVAVEKGCDVDQPRNLAKSVTVE" misc_feature complement(2207129..2208958) /locus_tag="Acear_2105" /note="glucosamine--fructose-6-phosphate aminotransferase; Reviewed; Region: PRK00331" /db_xref="CDD:178980" misc_feature complement(2208317..2208955) /locus_tag="Acear_2105" /note="Glutamine amidotransferases class-II (Gn-AT)_GFAT-type. This domain is found at the N-terminus of glucosamine-6P synthase (GlmS, or GFAT in humans). The glutaminase domain catalyzes amide nitrogen transfer from glutamine to the appropriate substrate...; Region: GFAT; cd00714" /db_xref="CDD:48478" misc_feature complement(order(2208581..2208586,2208656..2208661, 2208701..2208703,2208728..2208733,2208737..2208742, 2208878..2208880,2208953..2208955)) /locus_tag="Acear_2105" /note="glutaminase active site [active]" /db_xref="CDD:48478" misc_feature complement(2207699..2208076) /locus_tag="Acear_2105" /note="SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal...; Region: SIS_GlmS_GlmD_1; cd05008" /db_xref="CDD:88405" misc_feature complement(order(2207894..2207896,2207960..2207962, 2207969..2207971,2207981..2207983,2207987..2207989, 2208008..2208013,2208020..2208025,2208053..2208058)) /locus_tag="Acear_2105" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:88405" misc_feature complement(order(2207909..2207917,2208047..2208052)) /locus_tag="Acear_2105" /note="active site" /db_xref="CDD:88405" misc_feature complement(2207135..2207599) /locus_tag="Acear_2105" /note="SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal...; Region: SIS_GlmS_GlmD_2; cd05009" /db_xref="CDD:88406" misc_feature complement(order(2207138..2207140,2207153..2207158, 2207348..2207353,2207357..2207359,2207369..2207374, 2207423..2207434,2207438..2207446,2207450..2207452, 2207462..2207464,2207468..2207470,2207474..2207476, 2207480..2207482,2207492..2207494,2207534..2207536)) /locus_tag="Acear_2105" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:88406" misc_feature complement(order(2207489..2207491,2207498..2207500)) /locus_tag="Acear_2105" /note="active site" /db_xref="CDD:88406" gene complement(2209162..2210502) /locus_tag="Acear_2106" /db_xref="GeneID:9514165" CDS complement(2209162..2210502) /locus_tag="Acear_2106" /EC_number="5.4.2.10" /note="COGs: COG1109 phosphomannomutase; InterProIPR006352:IPR016066:IPR005844:IPR005845:IPR 005846:IPR005843:IPR016055:IPR005841; KEGG: hor:Hore_01560 phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; PRIAM: phosphoglucosamine mutase; SPTR: B8D0U9 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase, C-terminal domain; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase" /codon_start=1 /transl_table=11 /product="phosphoglucosamine mutase" /protein_id="YP_003828661.1" /db_xref="GI:302392841" /db_xref="GeneID:9514165" /translation="MGALFGTDGVRGLANQELTVDLVCRLGKAAGYRLTQEVEYPTVL IGRDTRISGDMLEAALVAGLNSIGVDVLQAGIIPTPVVAYLTKELEVDGGIMISASHN PVADNGIKFFRANGLKLNDELENEIEELFFADPAEIPQPTGVDVGMVEELIEPLVPYK KHLDKVIDADFTGLKVVVDAANGAAFELAPEILREFGAEVIALNDLPDGTNINRNCGS THPEELQAAVEENEADIGIGLDGDGDRIIAVAETGELVDGDGIMAICGRHLIEQDQLP DKTVVTTKYSNLGLQDSLAELGGKVEITKNGDRYVLAEMLEHGYKLGGEKSGHIIFLD YNTTGDGVLTALQLLTVMEETGQPLSELAGVMEPYPQLLVNVEVEDKESWQDNEEIQT AIEEAEETLGSNGRVFVRASGTEPVIRIMVEGKDTEELEELANQIKTTVKEELD" misc_feature complement(2209168..2210499) /locus_tag="Acear_2106" /note="phosphoglucosamine mutase; Provisional; Region: glmM; PRK14316" /db_xref="CDD:184616" misc_feature complement(2209192..2210493) /locus_tag="Acear_2106" /note="GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-...; Region: GlmM; cd05802" /db_xref="CDD:100095" misc_feature complement(order(2209246..2209248,2209261..2209269, 2209273..2209275,2209516..2209518,2209522..2209524, 2209528..2209530,2209579..2209587,2209648..2209650, 2209768..2209773,2209777..2209779,2209783..2209785, 2210173..2210175,2210197..2210205,2210470..2210472, 2210479..2210481,2210485..2210487)) /locus_tag="Acear_2106" /note="active site" /db_xref="CDD:100095" misc_feature complement(order(2209246..2209248,2209261..2209269, 2209273..2209275,2209516..2209518,2209522..2209524, 2209528..2209530,2209579..2209581,2209585..2209587, 2209648..2209650,2209768..2209770,2210203..2210205, 2210479..2210481)) /locus_tag="Acear_2106" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100095" misc_feature complement(order(2209771..2209773,2209777..2209779, 2209783..2209785,2210203..2210205)) /locus_tag="Acear_2106" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:100095" gene complement(2210613..2211338) /locus_tag="Acear_2107" /db_xref="GeneID:9514166" CDS complement(2210613..2211338) /locus_tag="Acear_2107" /EC_number="5.3.3.10" /note="COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR018833:IPR002529:IPR011234; KEGG: pmo:Pmob_0980 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF2437; PRIAM: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; SPTR: A9BJV9 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family" /codon_start=1 /transl_table=11 /product="5-carboxymethyl-2-hydroxymuconateDelta- isomerase" /protein_id="YP_003828662.1" /db_xref="GI:302392842" /db_xref="GeneID:9514166" /translation="MKYVRFKADSEVKYGILNGEQIQVLDRDRHYPLSEVDLLAPCQP NKIVCVGLNYLDHARELDMELPEEPVIFIKPATAVIGPEDVIKYPAVSSQVDYEAEIA AVIKREAKDITAQEAEDYTLGYTCFNDITARDLQDKDGQWTRAKSFDTFAPLGPVIST EVDPNDLQIQLFQNGSLKQESTTGQMIFKMEELISFISQIMTLKPGDVVATGTPPGVG SVQKGDQLEVRIEGIGGLINHVG" misc_feature complement(2211216..2211338) /locus_tag="Acear_2107" /note="Domain of unknown function (DUF2437); Region: DUF2437; pfam10370" /db_xref="CDD:150960" misc_feature complement(2210619..2211335) /locus_tag="Acear_2107" /note="4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit; Region: HpaG-C-term; TIGR02303" /db_xref="CDD:131356" misc_feature complement(2210619..2211203) /locus_tag="Acear_2107" /note="Fumarylacetoacetate (FAA) hydrolase family; Region: FAA_hydrolase; cl11421" /db_xref="CDD:196225" gene complement(2211463..2212368) /locus_tag="Acear_2108" /db_xref="GeneID:9514167" CDS complement(2211463..2212368) /locus_tag="Acear_2108" /EC_number="2.7.7.9" /note="COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005771:IPR005835; KEGG: cbt:CLH_2921 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; SPTR: B2UYN6 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase" /codon_start=1 /transl_table=11 /product="UDP-glucose pyrophosphorylase" /protein_id="YP_003828663.1" /db_xref="GI:302392843" /db_xref="GeneID:9514167" /translation="MQVKKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIVEEA VQAGIEDVIIITGRHKRAIEDHFDKSFELEVNLAEQGKLERLEMVKDISNLVDVHYVR QKEPLGLGHAILCAETFIGDEPFAVLLGDDIVKSDTPVTKQLIDTFEEKQSTIIGVQK VEDEAVNKYGIVDYSNGNNGDYKVQDLIEKPSLEEAPSNIAILGRYVITPAIFDILRG TEPGKGGEIQLTDALKTLLDQEDVYAHIFNGRRYDIGNKLGFLEAVVEFAFARDDIRA PFKDYLLEYLPEELKEEVFNRAAAK" misc_feature complement(2211565..2212359) /locus_tag="Acear_2108" /note="Prokaryotic UGPase catalyses the synthesis of UDP-glucose; Region: UGPase_prokaryotic; cd02541" /db_xref="CDD:133021" misc_feature complement(order(2211679..2211681,2211763..2211765, 2211799..2211804,2211859..2211864,2211973..2211978, 2211982..2211984,2212042..2212053,2212060..2212062, 2212288..2212293,2212333..2212344)) /locus_tag="Acear_2108" /note="active site" /db_xref="CDD:133021" misc_feature complement(order(2211571..2211579,2211583..2211591, 2211595..2211603,2211619..2211621,2211691..2211693, 2211865..2211867,2212051..2212053,2212057..2212059, 2212063..2212068,2212150..2212155,2212165..2212167, 2212171..2212179,2212183..2212185,2212255..2212257, 2212267..2212275,2212279..2212287,2212297..2212305, 2212309..2212323,2212330..2212332)) /locus_tag="Acear_2108" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:133021" gene complement(2212475..2212741) /locus_tag="Acear_2109" /db_xref="GeneID:9514168" CDS complement(2212475..2212741) /locus_tag="Acear_2109" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828664.1" /db_xref="GI:302392844" /db_xref="GeneID:9514168" /translation="MIDFIEADYQAGRLKNIKSGQLSYSILKKLFASIIPQIDLDKVG LVERINLQDKQYNTIRYIIKGHQGEVLTVKNYFPSNATGHKALA" gene 2212924..2213313 /locus_tag="Acear_2110" /db_xref="GeneID:9514169" CDS 2212924..2213313 /locus_tag="Acear_2110" /note="InterPro IPR001387:IPR010982; KEGG: tex:Teth514_0702 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: B0K4S0 transcriptional regulator, XRE family; PFAM: Helix-turn-helix" /codon_start=1 /transl_table=11 /product="XRE family transcriptional regulator" /protein_id="YP_003828665.1" /db_xref="GI:302392845" /db_xref="GeneID:9514169" /translation="MKFNKRLKKLRLEHNLRQKDIAEDLNLTPSAIGFYEQGKRKPDF EMLSRLADYFEVSVDYLLGRTKKDQFYHSQQKQGKMVKENQTNYCAQDNEVPNRDDLA KLVQQAESLPPKAIQALIEFIQTMEEE" misc_feature 2212936..2213106 /locus_tag="Acear_2110" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cd00093" /db_xref="CDD:28977" misc_feature order(2212945..2212947,2212957..2212959,2213032..2213034) /locus_tag="Acear_2110" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28977" misc_feature order(2212954..2212956,2213029..2213031) /locus_tag="Acear_2110" /note="salt bridge; other site" /db_xref="CDD:28977" misc_feature order(2212975..2212980,2213011..2213013,2213020..2213022, 2213032..2213037) /locus_tag="Acear_2110" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:28977" gene complement(2213876..2215726) /locus_tag="Acear_2111" /db_xref="GeneID:9514170" CDS complement(2213876..2215726) /locus_tag="Acear_2111" /note="COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869:IPR016040; KEGG: cno:NT01CX_1779 polysaccharide biosynthesis family protein; PFAM: polysaccharide biosynthesis protein CapD; SPTR: A0PZQ0 polysaccharide biosynthesis protein superfamily; PFAM: polysaccharide biosynthesis protein" /codon_start=1 /transl_table=11 /product="polysaccharide biosynthesis protein CapD" /protein_id="YP_003828666.1" /db_xref="GI:302392846" /db_xref="GeneID:9514170" /translation="MIDLLLKLYKKPRLIIIDLLLINLALILGFVLRFDSNWLSHFSY SYSVIVSIIGLIILYFSGLYKKMWHYASINELKSIIRIVALINLSFTLYIFLAQISFS RSVIIISGVLNILFLGGLRFLLRLIKDYLEYERCDGADTKVLIVGAGDAAEILIREMY KHPELEKEIVGLVDDDPEKLGLEIHGKKVLGDRYDIPDIIEEYDVCEVIIAIPSTAGE AIEKIYDLSNQDGVEIKIVPGLNEIINDGFNLNQIREVGVEDLLRREQVDLNTDQICS YLKDKTVLVTGGGGSIGSELCRQIAHFSPERLIIFDISENNTYFIDLELKEKFNNLEI IPVIGSIQDKHKLEQTFERYQPDVVFHAAAHKHVPLMEHNPEEAVKNNIFGTKRLAET ADECNVERFVLISTDKAVNPTNVMGSTKRTAEMIIQGLNKESKTKFMAVRFGNVLGSK GSVIPLFKRQIAQGGPVTVTHKEVERYFMTIPEAAQLVIQAGSLGTGGEVFVLDMGEP VKIIDLAKDLIKLSGLEVGEDIEIEIIGLRPGEKLSEELLYDDENTISTDHDRIFITN LNGVSQESLNSKLDRLKKVVKLSDSSAIIKSLVELIGTYKPNRDNIKEIS" misc_feature complement(2213882..2215549) /locus_tag="Acear_2111" /note="Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]; Region: COG1086" /db_xref="CDD:31283" misc_feature complement(2214929..>2215342) /locus_tag="Acear_2111" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(order(2215049..2215051,2215091..2215096, 2215211..2215216,2215274..2215282)) /locus_tag="Acear_2111" /note="NAD(P) binding pocket [chemical binding]; other site" /db_xref="CDD:133449" misc_feature complement(2214035..2214892) /locus_tag="Acear_2111" /note="UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs; Region: UDP_invert_4-6DH_SDR_e; cd05237" /db_xref="CDD:187548" misc_feature complement(order(2214377..2214382,2214389..2214400, 2214467..2214469,2214515..2214517,2214584..2214586, 2214629..2214631,2214635..2214643,2214704..2214712, 2214788..2214793,2214851..2214862,2214866..2214868)) /locus_tag="Acear_2111" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187548" misc_feature complement(order(2214359..2214361,2214374..2214379, 2214587..2214589,2214596..2214598,2214605..2214607, 2214617..2214619,2214626..2214637,2214689..2214691, 2214698..2214700,2214707..2214718,2214758..2214760, 2214770..2214772,2214782..2214784,2214788..2214790)) /locus_tag="Acear_2111" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187548" misc_feature complement(order(2214104..2214106,2214113..2214115, 2214194..2214196,2214299..2214301,2214305..2214307, 2214317..2214325,2214356..2214361,2214368..2214376, 2214392..2214397,2214479..2214481,2214503..2214511, 2214629..2214631)) /locus_tag="Acear_2111" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187548" misc_feature complement(order(2214467..2214469,2214479..2214481, 2214509..2214511,2214581..2214583)) /locus_tag="Acear_2111" /note="active site" /db_xref="CDD:187548" gene complement(2215973..2217091) /locus_tag="Acear_2112" /db_xref="GeneID:9514171" CDS complement(2215973..2217091) /locus_tag="Acear_2112" /EC_number="2.6.1.50" /note="COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015424:IPR015421:IPR015422; KEGG: mbu:Mbur_1589 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: glutamine--scyllo-inositol transaminase; SPTR: Q12VN3 Aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family" /codon_start=1 /transl_table=11 /product="glutamine--scyllo-inositol transaminase" /protein_id="YP_003828667.1" /db_xref="GI:302392847" /db_xref="GeneID:9514171" /translation="MTIGLSGPDIGSREKELVNEVLESGWLSLGPKLEEFEEKFADYI GTDYAIGVNSGTSGLHLLIRALGIGEGDEVITTPFSFISSSNCILFEDAEPIFVDIDP ETLCIDPDKIEAAINDKTKAILPVDVFGQPANMTEIMAIADKHDLKVIEDSCEAIGAE HKGQKVGTFADASVFAFYPNKQMTTGEGGVIVTDDEEIADLCRSMRNQGRGTDSSWLN HVRLGYNYRLDEMSCAVGIAQLERIEEILAKRAEVAEEYNRLLADVDEVTTLSIVEET TKMSWFVYVIQLAEGIDRSSVMDHLRSNDIQCKPYFTPIHLQPFYVDEFGYERGDFPI TEQVTDSTIALPFYNNLTKQEIQQVVEILKEGIEKDKK" misc_feature complement(2215985..2217091) /locus_tag="Acear_2112" /note="Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]; Region: WecE; COG0399" /db_xref="CDD:30748" misc_feature complement(2216000..2217052) /locus_tag="Acear_2112" /note="3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary...; Region: AHBA_syn; cd00616" /db_xref="CDD:99740" misc_feature complement(order(2216159..2216161,2216549..2216554, 2216564..2216566,2216627..2216629,2216636..2216638, 2216924..2216929)) /locus_tag="Acear_2112" /note="inhibitor-cofactor binding pocket; inhibition site" /db_xref="CDD:99740" misc_feature complement(order(2216549..2216551,2216564..2216566, 2216627..2216629,2216636..2216638,2216852..2216854, 2216924..2216929)) /locus_tag="Acear_2112" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99740" misc_feature complement(2216549..2216551) /locus_tag="Acear_2112" /note="catalytic residue [active]" /db_xref="CDD:99740" gene complement(2217095..2217724) /locus_tag="Acear_2113" /db_xref="GeneID:9514172" CDS complement(2217095..2217724) /locus_tag="Acear_2113" /note="COGs: COG1045 serine acetyltransferase; InterProIPR020019:IPR018357:IPR001451:IPR011004:IPR 016040; KEGG: mbu:Mbur_1588 hexapaptide repeat-containing transferase; SPTR: Q12VN4 protein with transferase hexapeptide repeat domains; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; PFAM: CoA binding domain; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family" /codon_start=1 /transl_table=11 /product="sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family" /protein_id="YP_003828668.1" /db_xref="GI:302392848" /db_xref="GeneID:9514172" /translation="METVIIGAGGHGKVVLDILKTNNKFKIKGFLDDNPKIHGKEING HQVLGSLDYLKDKEYSAIIAVGNNIIRNKIGKFLAENNIKLINAIHKSAIINSYVEVG VGNVIAAGVIINSNTEIGNNTIINTGATIDHDNIIKDNVHISPGVNLGGNVTINENSH IGIGATILPEITIGRNVIVGAGAVVTEDVPDNVTVVGIPAEIIKENREE" misc_feature complement(2217125..2217715) /locus_tag="Acear_2113" /note="sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; Region: NeuD_NnaD; TIGR03570" /db_xref="CDD:188339" misc_feature complement(2217128..2217712) /locus_tag="Acear_2113" /note="Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain. The alignment contains 6 turns, each containing...; Region: LbH_AT_putative; cd03360" /db_xref="CDD:100050" misc_feature complement(order(2217203..2217205,2217209..2217211, 2217215..2217217,2217227..2217229,2217257..2217259, 2217263..2217268,2217281..2217283,2217311..2217313, 2217317..2217319,2217335..2217337,2217365..2217367, 2217371..2217373,2217383..2217385,2217389..2217391)) /locus_tag="Acear_2113" /note="putative trimer interface [polypeptide binding]; other site" /db_xref="CDD:100050" misc_feature complement(order(2217203..2217205,2217221..2217223, 2217257..2217259,2217272..2217277,2217281..2217283)) /locus_tag="Acear_2113" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:100050" gene complement(2217724..2218323) /locus_tag="Acear_2114" /db_xref="GeneID:9514173" CDS complement(2217724..2218323) /locus_tag="Acear_2114" /EC_number="2.7.8.6" /note="COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: pth:PTH_1100 sugar transferases; PFAM: sugar transferase; PRIAM: undecaprenyl-phosphate galactose phosphotransferase; SPTR: Q1ZRK7 Sugar transferase involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase" /codon_start=1 /transl_table=11 /product="undecaprenyl-phosphate galactose phosphotransferase" /protein_id="YP_003828669.1" /db_xref="GI:302392849" /db_xref="GeneID:9514173" /translation="MLIKRVIDFFGSLVGLVILLPLFIIISLLIKIDSKGPVFFKQDR LGKDGEVFEIYKFRTMVENAENIGDGLFTSKGDPRITKVGKLLRKISLDELPQLINVL KGDMSLIGPRPPVPYYPYKYDEYSDEQKSRFDVKPGITGYAQINGRNNLSWDERIEYD IEYVKNFSLLLDLKIIFSTLAIVLKRDGIYGENKKKVKK" misc_feature complement(2217754..2218314) /locus_tag="Acear_2114" /note="Bacterial sugar transferase; Region: Bac_transf; cl00939" /db_xref="CDD:193981" gene complement(2218374..2219609) /locus_tag="Acear_2115" /db_xref="GeneID:9514174" CDS complement(2218374..2219609) /locus_tag="Acear_2115" /note="COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: pth:PTH_1109 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A5D389 glycosyltransferase; PFAM: glycosyl transferases group 1" /codon_start=1 /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_003828670.1" /db_xref="GI:302392850" /db_xref="GeneID:9514174" /translation="MTDIWLINHHATTKGRHTNISRELVNKGNTVKLFASSFKHNVYK ELKDYPEGKNYLKEKEENYERVWIKTPPYDKNGFKRLINQLVFAYRVIKTGLNMKSPD VIIGSSVHLFAGLAAYILAKIKKVPFIFEVRDLWPQTLVDLDVLNDKSPVTYLFRWLE KFLYKKADKIISVLPRGVDYISSLGIKEEKVIHIPNGVDLTWFDRHINTELENKELIN FFNNQKDMVFAYTGAHGLANGLITLVKSAKIIQDRNIRKNIQFLLVGDGPEKEKLIKE AKRLELNNITFIPRVDKDQVPAILNKADVCVSIVRKSKVHKYGVSMNKIFDYLASGKP MISALEAAFDFADVADCGIALPPDDPPRLANAVVEMSEISLEDREELGKNGRQFVEEN NDYPILAGKLIKVIEEVCR" misc_feature complement(2218401..2219600) /locus_tag="Acear_2115" /note="This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase; Region: GT1_wbuB_like; cd03794" /db_xref="CDD:99968" gene complement(2219644..2220579) /locus_tag="Acear_2116" /db_xref="GeneID:9514175" CDS complement(2219644..2220579) /locus_tag="Acear_2116" /note="KEGG: mvn:Mevan_0403 hypothetical protein; SPTR: B4CZU5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828671.1" /db_xref="GI:302392851" /db_xref="GeneID:9514175" /translation="MEWPGDKKFAFTIFDDTDNSTVKNVSPIYNLLLENNLKTTKSVW VYPPNDNQFSGDCLLDENYLDFVRNLNGNGFEIALHNVGSGNFKRDDIVQGIELFEKL LGFYPNIQVNHAGNRDNIYFGAKRFLPPFSSLYKLYRYIKGGISFEGEVETSKYFWGD IVKEKIKYIRNFTFNGINTLKYDPAMPYIDPQKEEYSNYWFSSSDGHTVEEFNNLIKK ENVDKLAKEGGACIVYTHFASGFVNENGEINLEFKNKLNYLASKNGWFVPVSKLLDYL LQNKEKSSRASYFYLFKLNLLWLIDRLLKKIKYNR" gene complement(2220681..2221535) /locus_tag="Acear_2117" /db_xref="GeneID:9514176" CDS complement(2220681..2221535) /locus_tag="Acear_2117" /note="InterPro IPR007087; KEGG: hch:HCH_06158 sulfotransferase protein; SPTR: C6NM78 Sulfotransferase; PFAM: Sulfotransferase domain" /codon_start=1 /transl_table=11 /product="sulfotransferase protein" /protein_id="YP_003828672.1" /db_xref="GI:302392852" /db_xref="GeneID:9514176" /translation="MVSDKENLKPDFIGIGAMKCATTWLSECLRCHPDIYMSSPKEIH FFSAHYEKELEWYLDHFKESDNFKIRGEFSTSYLPNNEVPIRIKETLGEVKLLVSLRN PVERFISHYKHYLRDEKLVGNLNLKNYQKSIEKYPELLDRGNYSDQLKKYIENFGFDN IKIIIKENIDSKPKEVLGNVYSFLNVDSNFVPPLVEKKVSPGITPKIQLLENLRKMIF SLAKSEAPWFIDLVKKFRIPELYRKLNNKKTFQVDLEVKDKLYDYYRNEIFEVENLIK KDLSFWKR" misc_feature complement(<2220969..2221511) /locus_tag="Acear_2117" /note="Sulfotransferase domain; Region: Sulfotransfer_1; pfam00685" /db_xref="CDD:144327" gene 2221705..2222715 /locus_tag="Acear_2118" /pseudo /db_xref="GeneID:9514177" gene complement(2222996..2224105) /locus_tag="Acear_2119" /db_xref="GeneID:9514178" CDS complement(2222996..2224105) /locus_tag="Acear_2119" /note="COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: dtu:Dtur_0584 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: B8DZD9 glycosyl transferase group 1; PFAM: glycosyl transferases group 1" /codon_start=1 /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_003828673.1" /db_xref="GI:302392853" /db_xref="GeneID:9514178" /translation="MKKIVFMSSVHDVFDTRIFHKEAKTLKKAGYDVTLIAQHTKKEV INGIEIIPIDESNNRYKRFIKTVWEVLKKSFQVKGDIYHFHDPELIPIGLLLKLNGMK VIYDVHEDVPKQIVSKEWIWKPIRGFVSKLASGMEKLADKFFNAIVSATPTIEKKFNN KNSIAVQNFPLLDELHISNSSENNKKKNIVTYVGSITKSRGIKEMVKAIDILSEDYDA KFLLAGKFTSKHLKDKTKKINGWSKVEFQGWIDRKQVASNLSQAKAGLVVLHPKHRYK VSYPIKMFEYMTAGLPVIASDFPLWEEIIEGNECGITVDPLDPKEIAEAIQYIFNHSE EAKRMGQNGRKIVEYKYNWSVEEKKLLNLYENILN" misc_feature complement(2223023..2224075) /locus_tag="Acear_2119" /note="This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase; Region: GT1_wbuB_like; cd03794" /db_xref="CDD:99968" misc_feature complement(2222999..2224057) /locus_tag="Acear_2119" /note="Glycosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaG; COG0438" /db_xref="CDD:30787" gene complement(2224329..2225543) /locus_tag="Acear_2120" /db_xref="GeneID:9514179" CDS complement(2224329..2225543) /locus_tag="Acear_2120" /note="InterPro IPR007016; KEGG: ssp:SSP0069 polysaccharide polymerase; PFAM: O-antigen polymerase; SPTR: Q4A112 Putative polysaccharide polymerase; PFAM: O-Antigen ligase" /codon_start=1 /transl_table=11 /product="O-antigen polymerase" /protein_id="YP_003828674.1" /db_xref="GI:302392854" /db_xref="GeneID:9514179" /translation="MINIKKRYLENLFSFEASFLLFLNAGFFQNLGFLSFITTKIHII IIFAIINIISGLYILFIKKKCFIKRNNFNIFVLFVIFCIYVLLSYINTYGFPKADSKF LQFMFILPWCSFASLLIIDNKKRAFRFICFLFIVGFIFSCNAIFSVLVLGNEVEGYHR VGRMSGALILLSIIFLLNFKNKKCKFMMFSLIIIYILGLFSSAHRAGVISLIMTLIVM LIFYLKKSKDSILNRKSLIYILIFIILVSGVLLKVSDKSHYLISRLNSLYYSISSGNN SRLLMYKESLKVWSKHPIFGVGIGGFSQSTGLNKWRHPHNIYIELLLEFGIIGFGLFV TYMFIWVPSIIKLNYKNDITIFSLIILFIFLFINIMISGDIVDNRLFFSLIGILTSSI FSEIRKYKKIDL" misc_feature complement(2224590..2224973) /locus_tag="Acear_2120" /note="O-Antigen ligase; Region: Wzy_C; cl04850" /db_xref="CDD:194980" gene complement(2225565..2226431) /locus_tag="Acear_2121" /db_xref="GeneID:9514180" CDS complement(2225565..2226431) /locus_tag="Acear_2121" /note="KEGG: pmy:Pmen_1865 hypothetical protein; SPTR: A4XTG3 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828675.1" /db_xref="GI:302392855" /db_xref="GeneID:9514180" /translation="MKKFLKEIFRDIIWKIKNHIRRRNALKSKSEDFFLNLEEKVLNE ANCYFVLSTGRCGTLLLTKILNLDENSDVFHRPSPELVFPSTYAYKIGNDNPEKFKIA SMCARYDHIENSFICDRNFVETNCRITFFAPFLAQVFKKSKFIHLVRSPISFIKSAVS RGFYQHPKADRGHITPKDDASISWDTMTPIEKSAWLWNETNSYIEDFKQEIDSSRYIT IFSENLFTRPEEAEKSLSFLGNKSISKKQISKIIKKPVNKSKKSSLANNLNEEQIKNI EKYTSLAKLYNY" gene complement(2226456..2227646) /locus_tag="Acear_2122" /db_xref="GeneID:9514181" CDS complement(2226456..2227646) /locus_tag="Acear_2122" /note="KEGG: rrs:RoseRS_4421 hypothetical protein; SPTR: A5V1K1 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828676.1" /db_xref="GI:302392856" /db_xref="GeneID:9514181" /translation="MNVEKSKKEYVLDFLARIGFKDNGLSDKTIEFIFSYLAGIEELK TNRKYNDHNWEMNYASFDIKKNRYIPVIDYKIFNLYHKGLLKKIDRKENMWPQKKKFA LCITHDIDHLFGKSFLYYRKMIPHFNKAPIKNKLLFLGSFIKNSLNIKKKSIPDLGIW LKAEEKHNFKSSFLFFSDKLIEPSWEDSFYKYTDKTIFEGQKVEIGCVIKEIFKRGWD VGLHGSCKSYCNSQYLKYEKKRLENLIDCEIKTIRQHHLMFDIRDTPQCQNAVNFKVD STRGSNISPDFRCGTGFPFYQYDLNNEKSLDILQIPLVIQDNALFRHEKLNKEQVVNY VSEVMEMVADINGCMTILWHNNYYKNDKEFQAFEEILNKADKLGAWGCSLRELNDWWR RKRN" gene complement(2227648..2228913) /locus_tag="Acear_2123" /db_xref="GeneID:9514182" CDS complement(2227648..2228913) /locus_tag="Acear_2123" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828677.1" /db_xref="GI:302392857" /db_xref="GeneID:9514182" /translation="MVNINDIDDNFLFQLFELMDERNAKLGLARYDVRDYMSHPFYLK LRKTAPKPIEYLFRMPDVVAPLLLRKILKIEKKLIPTSLYHLGMSFLLMGKLKKNSSF LEESLNYCKVGLDIAIDAPYLCWKHPYKHHGYQWKDESEPKFNSCAHHTSRMGIFLDN IEKAFPEKDFINKSISTAKALLNYHNWHYYSNTCTVSYYPNTEDEVINTGAEVAALMA KTKKTSDTQRHLEGLVRTLVQEQLADGGWNYCTEHHYNKLGGKPVVDNAHNAMIMGAL ADIIDSDRLDEQLYNKTIKVLDKSVGFYFNSFVSSHGKVTKYPNRKEKTGALYDYCEG IIALCKTIRQTDVIDNKQSHELLENIIKKILKRAIEKFVDLKTGDVASDRYFKINYNV QSIRVGSGLLMETISQYLLTKQLLEEEKS" gene complement(2228935..2229831) /locus_tag="Acear_2124" /db_xref="GeneID:9514183" CDS complement(2228935..2229831) /locus_tag="Acear_2124" /note="COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: hch:HCH_05271 cell wall biosynthesis glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: B7R2A7 glycosyltransferase; PFAM: glycosyl transferase family 2" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_003828678.1" /db_xref="GI:302392858" /db_xref="GeneID:9514183" /translation="MPKVSIIIPTYNRASLLKRAIKSVLAQTFKDLELIIIDDNSNDC TEDIVKKYMKFDSRVKYIQNEVNLGGGAAATRNKGIDIARRKYCAFLDDDDEWREDKL EKQLNVLKKNDYSVIGSKKLVLKNCRDSSENLLQDKDYNDCSDFEEISLQDALSGRLH ISPSTLITKTEYLIEIGGFDEKLKASVGYDLNVRLINNFGKGAIINEKLTIIHQEHEY QRVSTSKKSINGAWQSYNKHHHLMSLKTKRKRLMSIHRKSILMDASSIKEKFFNIIKL IPYIDLLLIWIIKTILQKIIKN" misc_feature complement(2229052..2229831) /locus_tag="Acear_2124" /note="Predicted glycosyltransferases [General function prediction only]; Region: COG1216" /db_xref="CDD:31409" misc_feature complement(<2229493..2229816) /locus_tag="Acear_2124" /note="Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Region: Glyco_tranf_GTA_type; cd00761" /db_xref="CDD:132997" misc_feature complement(order(2229550..2229552,2229556..2229558, 2229721..2229723,2229799..2229801,2229805..2229807)) /locus_tag="Acear_2124" /note="active site" /db_xref="CDD:132997" gene complement(2229950..2230588) /locus_tag="Acear_2125" /db_xref="GeneID:9514184" CDS complement(2229950..2230588) /locus_tag="Acear_2125" /note="InterPro IPR013216; KEGG: plt:Plut_1867 hypothetical protein; PFAM: methyltransferase type 11; SPTR: Q3B1R6 Putative uncharacterized protein; PFAM: methyltransferase domain" /codon_start=1 /transl_table=11 /product="methyltransferase type 11" /protein_id="YP_003828679.1" /db_xref="GI:302392859" /db_xref="GeneID:9514184" /translation="MSEDEIQVSKEHYFNSTYDSKRRFCSYWHQIDEVRKLNPSSILE VGIGNGLVSDHLKKHGYSITTVDIDSDLNPDVVASIQDLPFKNGKFEVVMAYEVLEHL PFEEFSVAMQELKRVAQNYILISLPDRNRAYRFQIQLPKIGDIKFLIPIPTFIKSEHK FDGEHYWEIGKKNYSLNKIISNIENINGLKLIKTYRVFEIRSHRFFIIKIVD" misc_feature complement(2230238..2230462) /locus_tag="Acear_2125" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene complement(2230688..2232175) /locus_tag="Acear_2126" /db_xref="GeneID:9514185" CDS complement(2230688..2232175) /locus_tag="Acear_2126" /note="COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: hma:pNG7214 export protein; PFAM: polysaccharide biosynthesis protein; SPTR: Q5V6D5 Probable export protein; PFAM: polysaccharide biosynthesis protein" /codon_start=1 /transl_table=11 /product="polysaccharide biosynthesis protein" /protein_id="YP_003828680.1" /db_xref="GI:302392860" /db_xref="GeneID:9514185" /translation="MKKENNSKNKDNKNDSLAKKTIDSSLWMFGSSFLNKGFKFTRKI ILARILAPEDFGLFGIALLILSASDSLTKTGFNKALIQKQKEVEKYLNTAWTIQVMRG GILFLVLFSTAPIIALFFNEPLAIPILRVLAIAQIFKGVQNIGMIYFDKRLQFNKKFI YTVSGTVFDFTVSIIAAYILKNAWALVWGVLVGSIVKCMISFILHPYRPSLNFSIIKA KELFDFGKWKLATSFIVFFAVHLDDIIVGRILGTTKLGLFQMAFQLSNITASEISYVV SKVAFASYSKLQNDKKRLNIAYLRILELVVTISLPMIGGMIILAPLGIKLVLGEKWMP MLYSFRVLTIGGLFRTLSITGGALFDAVGFPKGDFMMNKWRFISLSITIIPFTYMWGL NGAAMTSGLALLVSLIPLIKNLSSILEQDLGVYLKLSIIPFISSLIMIGVILCSYEYE IIKWFYLIKLILLGSLVYFTLLYLFDKFNNLGPWTNIKWLLKKLL" misc_feature complement(2230742..2232115) /locus_tag="Acear_2126" /note="Polysaccharide biosynthesis protein; Region: Polysacc_synt; cl10513" /db_xref="CDD:187004" misc_feature complement(2230739..2232112) /locus_tag="Acear_2126" /note="Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]; Region: RfbX; COG2244" /db_xref="CDD:32425" gene complement(2232208..2233314) /locus_tag="Acear_2127" /db_xref="GeneID:9514186" CDS complement(2232208..2233314) /locus_tag="Acear_2127" /note="COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653:IPR015424:IPR015421:IPR015422; KEGG: dtu:Dtur_1353 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: B8E0I2 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family" /codon_start=1 /transl_table=11 /product="DegT/DnrJ/EryC1/StrS aminotransferase" /protein_id="YP_003828681.1" /db_xref="GI:302392861" /db_xref="GeneID:9514186" /translation="MKVPLLDLKEQYEGIKDEIQEAINDVLDSTRYIMGKHVEGLEEE VADYCDTEYGIGVASGTDALLLSLKALDIGPGDEVIVPTFTFFATAGVVSRLGATPVF ADIDPVTYNITPEEIEDKITDKTKAIIPVHLYGQPAEMNGIMDIADRYDLKVVEDACQ AIGAEYKGTQVGNFGDAAALSFFPSKNLGGYGDGGMVLTNDEELAQRIKRLRVHGAEP KYHHKEVGYNSRLDAIQAAVLRVKLKYLDEWTEGRQRVAETYDRLFEEYGLENEIVLP EKKIADSKHVYHQYVIRVDNRDELQKTLKEAGVSTSIYYPKPLHLQECYEDLGYQKGD LPVAEKACEEVLALPIDPALKKGQIKYVLKKFKL" misc_feature complement(2232214..2233308) /locus_tag="Acear_2127" /note="Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]; Region: WecE; COG0399" /db_xref="CDD:30748" misc_feature complement(2232214..2233260) /locus_tag="Acear_2127" /note="3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary...; Region: AHBA_syn; cd00616" /db_xref="CDD:99740" misc_feature complement(order(2232373..2232375,2232757..2232762, 2232772..2232774,2232835..2232837,2232844..2232846, 2233132..2233137)) /locus_tag="Acear_2127" /note="inhibitor-cofactor binding pocket; inhibition site" /db_xref="CDD:99740" misc_feature complement(order(2232757..2232759,2232772..2232774, 2232835..2232837,2232844..2232846,2233060..2233062, 2233132..2233137)) /locus_tag="Acear_2127" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99740" misc_feature complement(2232757..2232759) /locus_tag="Acear_2127" /note="catalytic residue [active]" /db_xref="CDD:99740" gene complement(2233540..2234280) /locus_tag="Acear_2128" /db_xref="GeneID:9514187" CDS complement(2233540..2234280) /locus_tag="Acear_2128" /note="COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR001451:IPR011004; KEGG: ckr:CKR_2805 hypothetical protein; PFAM: transferase hexapeptide repeat containing protein; SPTR: C6PW74 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats)" /codon_start=1 /transl_table=11 /product="transferase hexapeptide repeat containing protein" /protein_id="YP_003828682.1" /db_xref="GI:302392862" /db_xref="GeneID:9514187" /translation="MNKISETAKLGDNVSVGDFSIIKDDVKIGNNVIIGNNVVIHEGT TIGDNIRIDDNTVIGKQPMKAVTSAVSDDELQPPCEIGDGCLIGANTVIYAGCEIGSD CLVADQASIRENVEIGEKTIIGRGVAVENYCQIGSKCKLETNVYITAYSEVEDNCFIA PGVITSNDNFAGRSEERYDYFKGVTVKEGGRIGAGATILPGKVIEEDGFVAAGSTVTK DVPAKKIVAGTPAEIFKDVPEDQLLENQ" misc_feature complement(2233894..>2234271) /locus_tag="Acear_2128" /note="Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes...; Region: LbetaH; cl00160" /db_xref="CDD:193687" misc_feature complement(order(2233927..2233929,2233933..2233935, 2233939..2233941,2233951..2233953,2233981..2233983, 2233987..2233992,2234005..2234007,2234035..2234037, 2234041..2234043,2234071..2234073,2234122..2234124, 2234128..2234130,2234140..2234142,2234146..2234148)) /locus_tag="Acear_2128" /note="putative trimer interface [polypeptide binding]; other site" /db_xref="CDD:100038" misc_feature complement(order(2233927..2233929,2233945..2233947, 2233981..2233983,2233996..2234001,2234005..2234007)) /locus_tag="Acear_2128" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:100038" misc_feature complement(2233582..2233932) /locus_tag="Acear_2128" /note="WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain. WcxM is thought to be bifunctional, catalyzing both the isomerization...; Region: LbH_WxcM_N_like; cd03358" /db_xref="CDD:100048" misc_feature complement(order(2233594..2233596,2233642..2233644, 2233699..2233701,2233708..2233710,2233714..2233716, 2233765..2233773,2233789..2233791,2233807..2233809, 2233813..2233815,2233837..2233839,2233861..2233863, 2233867..2233869)) /locus_tag="Acear_2128" /note="putative trimer interface [polypeptide binding]; other site" /db_xref="CDD:100048" misc_feature complement(order(2233591..2233593,2233597..2233602, 2233627..2233632,2233645..2233650,2233684..2233686, 2233699..2233704,2233708..2233710,2233765..2233767, 2233771..2233773,2233855..2233857,2233861..2233863)) /locus_tag="Acear_2128" /note="putative active site [active]" /db_xref="CDD:100048" misc_feature complement(order(2233771..2233773,2233855..2233857, 2233861..2233863)) /locus_tag="Acear_2128" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:100048" misc_feature complement(order(2233591..2233593,2233597..2233602, 2233606..2233608,2233627..2233632,2233645..2233650, 2233654..2233656,2233684..2233686,2233699..2233704, 2233708..2233710,2233765..2233767,2233771..2233773)) /locus_tag="Acear_2128" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:100048" gene complement(2234273..2235400) /locus_tag="Acear_2129" /db_xref="GeneID:9514188" CDS complement(2234273..2235400) /locus_tag="Acear_2129" /note="COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104:IPR016040; KEGG: tte:TTE0653 dehydrogenase and related proteins; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Q8RC00 Predicted dehydrogenases and related proteins; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain" /codon_start=1 /transl_table=11 /product="oxidoreductase domain protein" /protein_id="YP_003828683.1" /db_xref="GI:302392863" /db_xref="GeneID:9514188" /translation="MNNRLGFGIIGCGRISPKHVEGIINNYDEAELVAVSDLVPEKMD EAVDYFKEYIEDDERLKKEINADQNIKKYEDYKELLKDDEVDVVTIATETGYHAEITI DALNAGKHVIVEKAMALSTKDADRMIETADKKGLKLAVCHQNRFNPTVQQLREALQKD RFGRLVHAVASVRWNRNDEYYNMDDWHGTLALDGGILMNQCIHNIDMLCWMMGDVERV TAETDTFLRDIETEDAGMAVVRFKNGAIGLIEGTVCVYPRNLEETFNIFGEQGTVRLA GIAMNEIIDWKFADGAEDEAEKMKEANYETDTVYGYGHNLLFGDMIDAIREDRKPLVD GREGKKAMELVLAIYKSARIGQPIELPLEDYSTTTGVESYE" misc_feature complement(2234315..2235391) /locus_tag="Acear_2129" /note="Predicted dehydrogenases and related proteins [General function prediction only]; Region: MviM; COG0673" /db_xref="CDD:31017" misc_feature complement(2234975..2235388) /locus_tag="Acear_2129" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(2234651..2234941) /locus_tag="Acear_2129" /note="Oxidoreductase family, C-terminal alpha/beta domain; Region: GFO_IDH_MocA_C; cl11611" /db_xref="CDD:159579" gene complement(2235422..2236765) /locus_tag="Acear_2130" /db_xref="GeneID:9514189" CDS complement(2235422..2236765) /locus_tag="Acear_2130" /EC_number="1.1.1.22" /note="COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterProIPR017476:IPR001732:IPR014026:IPR014027:IPR 016040:IPR008927; KEGG: ate:Athe_1238 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: B9MRN4 Nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase" /codon_start=1 /transl_table=11 /product="nucleotide sugar dehydrogenase" /protein_id="YP_003828684.1" /db_xref="GI:302392864" /db_xref="GeneID:9514189" /translation="MSTVERVVEDQMLASAILKDKIKNKEAVIGVIGLGYVGLPLAVE KAKAGYEVIGFDIQQERVDMVNDGENYIGDVVDEELTDLVDEEMITATTDYQRIEVVD VVAICVPTPLDEYYQPNTEYVEASTTDIAKYLHKGMLIILESTTYPGTTEEIVKPILE ETGLKCGEDFFVAFSPERVDPGNKVYNTKNTPKVVGGITSTGTEIAADLYNNVLDSKV HTVSSPSVAEMEKIFENTFRNINIALANEMAILCDKMGIDVWEVINAAKTKPYGFMAF YPGPGLGGHCIPIDPFYLTWKAREHDYHTRLIELAGEINNSMPGFVVGRLMKILNKFK KTLNGADILMLGVAYKSDIDDLRESPALKIIDELKEEGAEIMYNDPHIPEFEHQGVNY ASQELTDELLEEADAVLIATAHSAYDYQKIVDKAQVVFDTRNGTEGIEADNVFRL" misc_feature complement(2235425..2236714) /locus_tag="Acear_2130" /note="UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]; Region: WecC; COG0677" /db_xref="CDD:31021" misc_feature complement(2235809..2236093) /locus_tag="Acear_2130" /note="UDP-glucose/GDP-mannose dehydrogenase family, central domain; Region: UDPG_MGDP_dh; pfam00984" /db_xref="CDD:144540" misc_feature complement(2235464..2235739) /locus_tag="Acear_2130" /note="UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; Region: UDPG_MGDP_dh_C; pfam03720" /db_xref="CDD:190725" gene complement(2236796..2237023) /locus_tag="Acear_2131" /db_xref="GeneID:9514190" CDS complement(2236796..2237023) /locus_tag="Acear_2131" /note="InterPro IPR018638; KEGG: tdn:Suden_0155 hypothetical protein; PFAM: protein of unknown function DUF2061, membrane; SPTR: B6BNF8 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2061)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828685.1" /db_xref="GI:302392865" /db_xref="GeneID:9514190" /translation="MNSNILKDITWRIIGSFITALITYIILQDVKVVSIIILIEVITK MIAYYFHERSWNRIQRGRDYKENRIIIHKNE" misc_feature complement(2236853..2237011) /locus_tag="Acear_2131" /note="Predicted membrane protein (DUF2061); Region: DUF2061; cl01257" /db_xref="CDD:154299" gene complement(2237210..2239027) /locus_tag="Acear_2132" /db_xref="GeneID:9514191" CDS complement(2237210..2239027) /locus_tag="Acear_2132" /EC_number="2.7.7.4" /note="COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; InterProIPR005225:IPR011779:IPR000795:IPR004161:IPR 009000:IPR009001; KEGG: amt:Amet_3492 sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; PRIAM: Sulfate adenylyltransferase; SPTR: C6PP07 Sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; adenylylsulphate kinase; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; translation elongation factor TU" /codon_start=1 /transl_table=11 /product="sulfate adenylyltransferase, large subunit" /protein_id="YP_003828686.1" /db_xref="GI:302392866" /db_xref="GeneID:9514191" /translation="MATELAEEKEDLNIVIAGHVDHGKSTIIGRLLADTDSLPEGKLE QVKETCRKNSKPFEYAFLLDALKDEQSQGITIDSARCFFETDKREYIILDAPGHIEFL KNMVTGAARAEAALLVIDADEGIQENSKRHGYMLSMLGIDQIVVLVNKMDLVDYDQDV YNEIVEDYTKFLHEIDIEPETFVPVSGMEGDNIASLSDNTPWYEDETVLEVLDSFDAE ELPMDKPFRMPVQDVYKFTKGGDNRRIVAGTITSGQVSVGDEVVFYPSGKKSTVKSIE GFNKPTTVSASVGESTGFTLEEQIYITRGEVATIDDEPQPEATSRIRANIFWLGRNEM TKNKEYHLKLGTTKVRARIEEIKRVIDASDLSQNEAKNEIERHDVAECILKLDKAIAF DLANEIAETSRFVIVDEYEIAGGGIVQEALEDKQSWVREKVMLRNYKWEKSHITNDER AEKYNQKSTLVLITGEEDVGKKPTAKALEKRLFNDGKIVYFLGIGNVLYGVDADIKGT EENNHREEHLRRLAEVSNIMLDAGAILAVTAVELTQDDLELIKTTVNPDKIETVWLGE DVTTDINYDLHIPEFEDEKEAAGKIKGLLQERGIIFKPW" misc_feature complement(2237753..2239012) /locus_tag="Acear_2132" /note="GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism]; Region: CysN; COG2895" /db_xref="CDD:32720" misc_feature complement(2238371..2238991) /locus_tag="Acear_2132" /note="CysN_ATPS subfamily. CysN, together with protein CysD, form the ATP sulfurylase (ATPS) complex in some bacteria and lower eukaryotes. ATPS catalyzes the production of ATP sulfurylase (APS) and pyrophosphate (PPi) from ATP and sulfate. CysD, which...; Region: CysN_ATPS; cd04166" /db_xref="CDD:133366" misc_feature complement(order(2238698..2238700,2238707..2238709, 2238755..2238757,2238761..2238763,2238782..2238784, 2238788..2238790,2238794..2238799,2238989..2238991)) /locus_tag="Acear_2132" /note="CysD dimerization site [polypeptide binding]; other site" /db_xref="CDD:133366" misc_feature complement(2238953..2238976) /locus_tag="Acear_2132" /note="G1 box; other site" /db_xref="CDD:133366" misc_feature complement(order(2238527..2238529,2238539..2238541, 2238659..2238664,2238731..2238736,2238788..2238793, 2238929..2238934,2238941..2238943,2238950..2238955, 2238965..2238967,2238971..2238973)) /locus_tag="Acear_2132" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:133366" misc_feature complement(order(2238464..2238472,2238569..2238574, 2238578..2238583,2238827..2238829,2238950..2238961, 2238965..2238967)) /locus_tag="Acear_2132" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133366" misc_feature complement(2238791..2238823) /locus_tag="Acear_2132" /note="Switch I region; other site" /db_xref="CDD:133366" misc_feature complement(2238803..2238805) /locus_tag="Acear_2132" /note="G2 box; other site" /db_xref="CDD:133366" misc_feature complement(2238737..2238748) /locus_tag="Acear_2132" /note="G3 box; other site" /db_xref="CDD:133366" misc_feature complement(2238686..2238742) /locus_tag="Acear_2132" /note="Switch II region; other site" /db_xref="CDD:133366" misc_feature complement(2238572..2238583) /locus_tag="Acear_2132" /note="G4 box; other site" /db_xref="CDD:133366" misc_feature complement(2238464..2238472) /locus_tag="Acear_2132" /note="G5 box; other site" /db_xref="CDD:133366" misc_feature complement(2238101..2238352) /locus_tag="Acear_2132" /note="CysN_NodQ_II: This subfamily represents the domain II of the large subunit of ATP sulfurylase (ATPS): CysN or the N-terminal portion of NodQ, found mainly in proteobacteria and homologous to the domain II of EF-Tu. Escherichia coli ATPS consists of...; Region: CysN_NodQ_II; cd03695" /db_xref="CDD:58086" misc_feature complement(2237777..2238079) /locus_tag="Acear_2132" /note="TCysN_NoDQ_II: This subfamily represents the domain II of the large subunit of ATP sulfurylase (ATPS): CysN or the N-terminal portion of NodQ, found mainly in proteobacteria and homologous to the domain II of EF-Tu. Escherichia coli ATPS consists of...; Region: CysN_NoDQ_III; cd04095" /db_xref="CDD:58077" misc_feature complement(<2237246..2237719) /locus_tag="Acear_2132" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" gene complement(2239323..2240594) /locus_tag="Acear_2133" /db_xref="GeneID:9514192" CDS complement(2239323..2240594) /locus_tag="Acear_2133" /EC_number="2.7.7.49" /note="COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477:IPR013597; KEGG: swo:Swol_2463 RNA-directed DNA polymerase (reverse transcriptase); PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; PRIAM: RNA-directed DNA polymerase; SPTR: Q0AU52 RNA-directed DNA polymerase (Reverse transcriptase); PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain" /codon_start=1 /transl_table=11 /product="RNA-directed DNA polymerase" /protein_id="YP_003828687.1" /db_xref="GI:302392867" /db_xref="GeneID:9514192" /translation="MGTKLDRMAEVARTRPKERFTSLIHLINEEMLIMCHHELDANKA AGIDEVIKSKYEENLRDNVRDLVARMKKQAYKPQPVKRVYIEKDNGKKRPLGIPTYED KLVQKALTKIFNAIYEEDFLECSFGFRPNRSCHDALRSLGKIINKPGIQYVVDTDIKG FFDNVNHKWMMKFLDNRIQDPNLQRLVVRFLRAGIMEEGEKWKTTQGTPQGGVCSPIL ANLYLHHVIDLWFDRIVRKHLEGEAYMVRYADDIIFCFETKEDVDRFYKALQGRLSKF ELELSEEKTKIVKLTDDDDDSNGTFDFLGFTHYMGKCKDGIKRLKRKTSKKRFRRGIK QFKDWIRSSRILPVKEFMRQLNRKLIGTYNYYAVSDNWRSMQRFFRRIRKLVYKWLNR RSQKKSFGWDKFKLFLNKYQIVKPKIKVNLY" misc_feature complement(2239671..2240354) /locus_tag="Acear_2133" /note="RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable...; Region: RT_G2_intron; cd01651" /db_xref="CDD:73157" misc_feature complement(2239674..2240336) /locus_tag="Acear_2133" /note="Reverse transcriptase (RNA-dependent DNA polymerase); Region: RVT_1; pfam00078" /db_xref="CDD:143860" misc_feature complement(order(2239680..2239685,2239842..2239847, 2239851..2239853,2239962..2239967,2240109..2240126)) /locus_tag="Acear_2133" /note="putative active site [active]" /db_xref="CDD:73157" misc_feature complement(order(2239845..2239847,2239965..2239967, 2240109..2240126)) /locus_tag="Acear_2133" /note="putative NTP binding site [chemical binding]; other site" /db_xref="CDD:73157" misc_feature complement(2239962..2239964) /locus_tag="Acear_2133" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:73157" misc_feature complement(2239374..2239619) /locus_tag="Acear_2133" /note="Group II intron, maturase-specific domain; Region: GIIM; pfam08388" /db_xref="CDD:149448" gene complement(2241369..2242638) /locus_tag="Acear_2134" /pseudo /db_xref="GeneID:9514193" gene complement(2243186..2244067) /locus_tag="Acear_2135" /db_xref="GeneID:9514194" CDS complement(2243186..2244067) /locus_tag="Acear_2135" /EC_number="2.7.7.4" /note="COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500:IPR014729:IPR011784; KEGG: amt:Amet_3493 sulfate adenylyltransferase subunit 2; PFAM: phosphoadenosine phosphosulfate reductase; SPTR: C6PP06 phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase family" /codon_start=1 /transl_table=11 /product="sulfate adenylyltransferase subunit 2" /protein_id="YP_003828688.1" /db_xref="GI:302392868" /db_xref="GeneID:9514194" /translation="MDHLDRLENKSIHIIREAYSEFNNLSMLWSIGKDSTVLLWLARK AFFGHVPLPLVHIDTDYKIPEMIEHRDRLAKEWELDMIYGQNEAALENKETFPDGNTT RIECCKNLKSEALKKTLNGTWPRYRMNHNTGKYEVEENPEPYTGVIVGVRADEEGTRS KERYFSPRDTNNDWDLGDQPPEFWDQYKTDFAPGTHVRVHPLLDWKEVDIWRYIEREN IPMVSLYYDQGDGTRYRSLGCNPCTDPVESTASTPQEIVKELESGKFSNIAERAGRKQ DEEDGGGLEELRKEGYM" misc_feature complement(2243192..2244058) /locus_tag="Acear_2135" /note="sulfate adenylyltransferase, small subunit; Region: CysD; TIGR02039" /db_xref="CDD:131094" misc_feature complement(2243354..2243998) /locus_tag="Acear_2135" /note="This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. A highly...; Region: PAPS_reductase; cd01713" /db_xref="CDD:30168" misc_feature complement(order(2243474..2243476,2243486..2243488, 2243591..2243593,2243735..2243737)) /locus_tag="Acear_2135" /note="Active Sites [active]" /db_xref="CDD:30168" gene complement(2244422..2245087) /locus_tag="Acear_2136" /db_xref="GeneID:9514195" CDS complement(2244422..2245087) /locus_tag="Acear_2136" /EC_number="2.7.8.6" /note="COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: hor:Hore_22910 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; PRIAM: undecaprenyl-phosphate galactose phosphotransferase; SPTR: B8D184 undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase" /codon_start=1 /transl_table=11 /product="undecaprenyl-phosphate galactose phosphotransferase" /protein_id="YP_003828689.1" /db_xref="GI:302392869" /db_xref="GeneID:9514195" /translation="MARSESEVINSKNNEIIVERKEVESLGYLIYLATKRLLDIVASI IGIILSFPIIIITAIAIKLESPGPIIFKQDRLGLNGEEFTIYKFRSMVENAESKTGPV WAKKNDSRVTKVGRFIRKTRIDELPQFVNILRGDMSLVGPRPERAVFVQKFSEDYPNF IDRLKVKPGVTGLAQVTGGYELSPHQKSRLDLLYIEKQGLLLDIMILLKTVLVVIFGD GAR" misc_feature complement(2244425..2244985) /locus_tag="Acear_2136" /note="Bacterial sugar transferase; Region: Bac_transf; cl00939" /db_xref="CDD:193981" gene complement(2245188..2245964) /locus_tag="Acear_2137" /db_xref="GeneID:9514196" CDS complement(2245188..2245964) /locus_tag="Acear_2137" /EC_number="3.1.3.48" /note="COGs: COG4464 Capsular polysaccharide biosynthesis protein; InterPro IPR004013:IPR016195:IPR016667; KEGG: cbt:CLH_3211 tyrosine-protein phosphatase CapC; PFAM: PHP domain protein; PRIAM: protein-tyrosine-phosphatase; SPTR: B2V0U7 Exopolysaccharide biosynthesis protein; PFAM: PHP domain" /codon_start=1 /transl_table=11 /product="protein-tyrosine-phosphatase" /protein_id="YP_003828690.1" /db_xref="GI:302392870" /db_xref="GeneID:9514196" /translation="MIDLHSHILPGVDDGVDDIEEALVVAKEAARQGITKMVATPHYL EEGCRLTPEETEEKIAKLQQVIDQAGIDIEILPGAEAYITPDLGWYIQQGKVSTINGS RYLLVEFPMDKKPSQIRNIFYDLKILGYTPVISHPERYSYIQQKPNLLYHWIQDGIYA QLNAGSLLGMFGSQVEETAEILVKHNLVQLIGSDVHSNGRRKVCLKQGRERLEEIVGS KAKQYLENAQLVIKDEEIEVIEPQYYEEKKGFLQLMLSMI" misc_feature complement(2245215..2245964) /locus_tag="Acear_2137" /note="Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]; Region: CapC; COG4464" /db_xref="CDD:34142" misc_feature complement(2245458..2245961) /locus_tag="Acear_2137" /note="PHP domain; Region: PHP; pfam02811" /db_xref="CDD:190435" gene complement(2245992..2246708) /locus_tag="Acear_2138" /db_xref="GeneID:9514197" CDS complement(2245992..2246708) /locus_tag="Acear_2138" /EC_number="2.7.10.2" /note="COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702; KEGG: dae:Dtox_4107 capsular exopolysaccharide family; PRIAM: Non-specific protein-tyrosine kinase; SPTR: C1TDD4 Capsular exopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family" /codon_start=1 /transl_table=11 /product="capsular exopolysaccharide family" /protein_id="YP_003828691.1" /db_xref="GI:302392871" /db_xref="GeneID:9514197" /translation="MIKMDKERRERIQSRDVELITNYSSKSPLAEAYRTLRTNIEFLS PDDPLETMVITSSVPQEGKSITIANLAVSMAENGQQVIVIDADMRKPMQHRIFEITNF GGLSDLLTGELNFAEGLQKTNIEGISLISGGNVPPNPAELLGSQKMEEVIKQAENKAD IVLIDSPPVIAVTDSRLLANKVDGVMLVVAAQETDEEALAKSQQMLEKVQANVIGTVL TKYPAEESNSYYSGYYNYYG" misc_feature complement(2246043..2246618) /locus_tag="Acear_2138" /note="capsular exopolysaccharide family; Region: eps_fam; TIGR01007" /db_xref="CDD:130080" misc_feature complement(<2246445..2246525) /locus_tag="Acear_2138" /note="Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras...; Region: Ras_like_GTPase; cl10444" /db_xref="CDD:195960" gene complement(2246692..2248203) /locus_tag="Acear_2139" /db_xref="GeneID:9514198" CDS complement(2246692..2248203) /locus_tag="Acear_2139" /note="COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR003856; KEGG: hor:Hore_22220 lipopolysaccharide biosynthesis protein; PFAM: lipopolysaccharide biosynthesis protein; SPTR: B8D0N1 Lipopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily" /codon_start=1 /transl_table=11 /product="lipopolysaccharide biosynthesis protein" /protein_id="YP_003828692.1" /db_xref="GI:302392872" /db_xref="GeneID:9514198" /translation="MDNLERQTTDSDITEDMVEIDLREYFTILWKRKMIIIGLLIVAI IGSLVASSLMTKIYQTSALVMVKEDKGMENLFSEQMGALGSLAGSTSNKLATYTQILK SRSIIQQTIEELELKSKETGELISPQALRNKISISGGQEGSGNLITITVNYSDPVVAK RIANTLVDKFQQMNQAMNQSDLQGAAGFVSKQLKEVKTRLANLEEKLLEYKKEHDVIL PEKQGEDLLEKLTKLETAKSKAEVELKQAEAGLKEVRANYNDQDKDIISARTIAQNPM VQKYKEQLSNLEVELTGLKESYTDNHPKVIATNRKIDEVTKRLNETVEEIVRSKTETI NPIYQTLKEKVITLQSKIITTKVQIDTHQQQIKELEKELNALPDKALALARLKRKNKI AEKVYTMLRERKEELQIQKAMKTSDIVVIDPAVVGDEPKPIKPKTKLNVAIAIILATF MGVGIIFVLEYLDTTIKEEQDIEELTDLPVLGTIPDFDTVDHSQGYGRDDQDG" misc_feature complement(2247703..2248149) /locus_tag="Acear_2139" /note="Chain length determinant protein; Region: Wzz; cl01623" /db_xref="CDD:186458" misc_feature complement(2246749..2248143) /locus_tag="Acear_2139" /note="polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; Region: pepcterm_ChnLen; TIGR03007" /db_xref="CDD:163099" misc_feature complement(2246743..>2246982) /locus_tag="Acear_2139" /note="Chain length determinant protein; Region: Wzz; cl01623" /db_xref="CDD:186458" gene complement(2248215..2249078) /locus_tag="Acear_2140" /db_xref="GeneID:9514199" CDS complement(2248215..2249078) /locus_tag="Acear_2140" /note="COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715:IPR019554; KEGG: geo:Geob_3002 polysaccharide export protein; PFAM: polysaccharide export protein; Soluble ligand binding domain; SPTR: A7BZP7 Apsular polysaccharide export protein; PFAM: polysaccharide biosynthesis/export protein; SLBB domain" /codon_start=1 /transl_table=11 /product="polysaccharide export protein" /protein_id="YP_003828693.1" /db_xref="GI:302392873" /db_xref="GeneID:9514199" /translation="MRKSISVIIGILLFCLLLSTGSVLASDYRLNVDDQLYVSVWGHP DLQQKVVVSPNGTITFPLVGEIQVEGMTVSKLTEVITTRLQEYVKIKPSQVNITLEKY EKFRVMVLGEVKKPGTYQVESGDRILDAISRAGGSTQIADLSRIRLTRGNQSQEVNIE AMLTGDGKLQNYQLQDSDVLHIPQAVIEVTILGEVRQPGVYKLEDNFHLSNLIARAGG LTNAAVDKAEYISGAEVKKIDLNQLMAGDSKENIILEDGDTIRIAQTNWTKTLFYVNG LNAIKSLLGGW" misc_feature complement(2248776..2249015) /locus_tag="Acear_2140" /note="Polysaccharide biosynthesis/export protein; Region: Poly_export; pfam02563" /db_xref="CDD:145609" misc_feature complement(2248521..2248997) /locus_tag="Acear_2140" /note="putative polysaccharide export protein, PEP-CTERM sytem-associated; Region: pepcterm_export; TIGR03027" /db_xref="CDD:132072" misc_feature complement(<2248671..2248763) /locus_tag="Acear_2140" /note="SLBB domain; Region: SLBB; pfam10531" /db_xref="CDD:192616" misc_feature complement(<2248251..>2248517) /locus_tag="Acear_2140" /note="polysaccharide export protein EpsE; Region: EpsE; TIGR03028" /db_xref="CDD:132073" misc_feature complement(2248383..2248514) /locus_tag="Acear_2140" /note="SLBB domain; Region: SLBB; pfam10531" /db_xref="CDD:192616" gene complement(2249179..2250432) /locus_tag="Acear_2141" /db_xref="GeneID:9514200" CDS complement(2249179..2250432) /locus_tag="Acear_2141" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828694.1" /db_xref="GI:302392874" /db_xref="GeneID:9514200" /translation="MSKKAVVFILLIMLLVIVSSGVSLAAQNQKSGWWSPYIGRFNGQ WDLSVGTHVWNDHLDLRNLQLRGNMDLAPGLRANMVLRSNEKFDTVDGFDPTFDELYL EKYGFHYGELGTLSASLKVGNMRYLRFPEPDLISLFDQVPGTEDLRFDDAETGYRGEM LTIEYDSKYGLGYHGTGINWDFGSERSGSNLIENYVFYRDKLGKLDLEARAGELQLRH PGGPVERGGRPYHLGRSGPGYSLYLGGNWRGYKAGLLYESIEDEKYDERDTRTGIMVR FAFSKITELLGKVRFDYTRSPEGFVAHIPLLKGRLGDIREEPPENAELVGEIKAERVT TYWQNGQSRNYYEHRLSHWGETGGQDTIVVAETKPWHLRVEALVSPHTSVTSWEEAKE WESDRQGPAQLTQLVTYKFYKVKND" gene 2250727..2251776 /locus_tag="Acear_2142" /db_xref="GeneID:9514201" CDS 2250727..2251776 /locus_tag="Acear_2142" /EC_number="5.3.1.8" /note="COGs: COG1482 phosphomannose isomerase; InterPro IPR001250:IPR011051:IPR014710:IPR014628; KEGG: hor:Hore_21530 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; PRIAM: Mannose-6-phosphate isomerase; SPTR: B8D0G2 Mannose-6-phosphate isomerase, class I; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I" /codon_start=1 /transl_table=11 /product="mannose-6-phosphate isomerase, type 1" /protein_id="YP_003828695.1" /db_xref="GI:302392875" /db_xref="GeneID:9514201" /translation="MFYPLKFEPIHKEKIWGGNRLAAQFDRSLPADKIGESWELAAHE NGTSIVSNGCFKGEGLPELIDKYWAEIMGQEIERSNYDKFPLLIKLLDANDKLSIQVH PDDEYAAKYNIDDSGKNELWYIIDAKPDAELIYGLQPDMTKEEFATSIEDGRLIDKLN SISVNPGDVVFIPAGTVHAIKEGILLAEIQQNSDTTYRIYDWDRVGSDGNPRELHIKE ALEAIDFNRNSYEKCRSIKLTEDNYQRKILAISEYFITERIKVENSFRAEPKKRRFEV LLSLTGQAEVSYSQDTVTISRGETVLIPAQLDSYQLNGKTEVLRTYISSDIEKFKAEL KAKEFTDTEIAKITF" misc_feature 2250733..2251692 /locus_tag="Acear_2142" /note="Phosphomannose isomerase [Carbohydrate transport and metabolism]; Region: ManA; COG1482" /db_xref="CDD:31671" misc_feature 2250736..2251692 /locus_tag="Acear_2142" /note="mannose-6-phosphate isomerase; Provisional; Region: PRK15131; cl14659" /db_xref="CDD:189265" gene complement(2251843..2253546) /locus_tag="Acear_2143" /db_xref="GeneID:9514202" CDS complement(2251843..2253546) /locus_tag="Acear_2143" /EC_number="5.4.2.2" /note="COGs: COG1109 phosphomannomutase; InterProIPR016066:IPR005844:IPR005845:IPR005846:IPR 016055:IPR005841; KEGG: hor:Hore_17410 alpha-phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; SPTR: B8CYX1 Alpha-phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase, C-terminal domain; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I" /codon_start=1 /transl_table=11 /product="alpha-phosphoglucomutase" /protein_id="YP_003828696.1" /db_xref="GI:302392876" /db_xref="GeneID:9514202" /translation="MSYREKYQEWLNNDYFDQETKEELKSIADDEAEIEDRFYTGLEF GTGGIRGVIGTGTNRINKYIIRQATQGLANNILQQSKLAKEQGVVIAHDSRFKSREFA LEAAAVLNGNGIKAYLFDELRPTPELSFAVRELDAVAGIVITASHNPPEYNGYKVYWS DGGQIVPKRAEGITAEIDQITDYSVIEYLEREVAEERGLFEIIGSEIDDKYITELKSL ISNPEVIDKEESDFKIIYTPLHGSGNKLVPRALKEIGFSNLQVVPQQEEPDPEFPTVD YPNPEEESVFELALEMAEEEEPDLILGTDPDADRLGLLLRRGDQYISLTGNQIGVLLM DYLLSQKAEADELPANGAVVKTIVTTELARAIADEYGVEVIDTLTGFKFIGEKIKEFQ QQGDQEFLFGFEESYGYLAGTFVRDKDAVMAATLVAEMAAYYKNKGLDLFQQLENLMD KYGYYLDDLESILLKGKEGQEKIEKILDTLRRESLNQINGKRVTEVKDYLTGIGDLPE ANVLQFDLEDNSRLTVRPSGTEPKIKFYFTAVGENWNEAEDKLEALKDELLSKVQQII E" misc_feature complement(2251939..2253546) /locus_tag="Acear_2143" /note="phosphoglucomutase-2-like protein; Provisional; Region: PTZ00150" /db_xref="CDD:185482" misc_feature complement(2251921..2253423) /locus_tag="Acear_2143" /note="This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-...; Region: PGM2; cd05799" /db_xref="CDD:100092" misc_feature complement(order(2251945..2251947,2251960..2251968, 2251972..2251974,2252323..2252325,2252329..2252331, 2252335..2252337,2252404..2252412,2252473..2252475, 2252617..2252622,2252626..2252628,2252632..2252634, 2253079..2253081,2253103..2253111,2253397..2253399, 2253406..2253408,2253412..2253414)) /locus_tag="Acear_2143" /note="active site" /db_xref="CDD:100092" misc_feature complement(order(2251945..2251947,2251960..2251968, 2251972..2251974,2252323..2252325,2252329..2252331, 2252335..2252337,2252404..2252406,2252410..2252412, 2252473..2252475,2252617..2252619,2253109..2253111, 2253406..2253408)) /locus_tag="Acear_2143" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100092" misc_feature complement(order(2252620..2252622,2252626..2252628, 2252632..2252634,2253109..2253111)) /locus_tag="Acear_2143" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:100092" gene complement(2253597..2254673) /locus_tag="Acear_2144" /db_xref="GeneID:9514203" CDS complement(2253597..2254673) /locus_tag="Acear_2144" /EC_number="2.7.7.22" /EC_number="2.7.7.13" /EC_number="5.3.1.8" /note="COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835:IPR001538; KEGG: hor:Hore_22860 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: B8D179 Mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase" /codon_start=1 /transl_table=11 /product="mannose-1-phosphate guanylyltransferase (GDP) ;mannose-6-phosphate isomerase, type 2" /protein_id="YP_003828697.1" /db_xref="GI:302392877" /db_xref="GeneID:9514203" /translation="MITPLIMAGGVGSRFWPLSRKDTPKQFLKLVDQDQSMIQATVDR ISDLSSYENIFIATNQNYLADIKEHLPEIPENNITVEPMGKNTAACIGLASLYIEQQD PQAVMVVLPSDHLIEDESSYLEILNTAVEVAKKGDNLVTIGIEPTQPETGYGYIAYDQ DEREIEIDNAFAVKEFTEKPDLKTAENFIEQGNYLWNSGMFVWRVDTIRKMFKKYMPN LHKGLERMKEAIGTEQEEEVLVEEFKKLDSISIDYGIMEQADNIYVVPGDFGWDDVGT WSSLERFKEVDLDGNLVEGNHIGLETKNSIIHGNGKLITTVGLDNVIIVETDDAIMVC DKDKAQDVKELRNKLKSEGYEDCL" misc_feature complement(2253669..2254673) /locus_tag="Acear_2144" /note="Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]; Region: {ManC}; COG0836" /db_xref="CDD:31178" misc_feature complement(2253834..2254670) /locus_tag="Acear_2144" /note="GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose; Region: GDP-M1P_Guanylyltransferase; cd02509" /db_xref="CDD:133003" misc_feature complement(order(2254335..2254337,2254647..2254649, 2254653..2254655)) /locus_tag="Acear_2144" /note="Substrate binding site [chemical binding]; other site" /db_xref="CDD:133003" misc_feature complement(<2253615..2253725) /locus_tag="Acear_2144" /note="Cupin domain; Region: Cupin_2; cl09118" /db_xref="CDD:195796" gene complement(2255253..2256236) /locus_tag="Acear_2145" /db_xref="GeneID:9514204" CDS complement(2255253..2256236) /locus_tag="Acear_2145" /note="COGs: COG0463 glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: msi:Msm_1627 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: A7B7G6 Putative uncharacterized protein; PFAM: glycosyl transferase family 2" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_003828698.1" /db_xref="GI:302392878" /db_xref="GeneID:9514204" /translation="MDKLDYELLSIVVPCYNEEETIPIFIKEIKKEIKEIKLNVEVIF VNDGSSDKTQEILQDVYTNNKSFVRVIDLSRNFGKESAMLAGLKYSKGDLITVMDADL QDPPTLLQDMIYAICEEGYDAVATRRHTRKGEPLMRSFFARQFYNIINKISDIDIVEG ARDYRMMTDQVAEALLNMKEYNRFSKGLYEWIGFNTKYIEFENVERVAGNTSWSFWKL FKYAVEGIVSFTTMPLRIASLLGAVVSGFSFIYMMIIIIKTLVFGEVVRGYPSLMSVI LALSGVQLLCMGILGEYLARTYTEVKDRPRYIVKSILDFSSNSDEKELKIS" misc_feature complement(2255268..2256212) /locus_tag="Acear_2145" /note="undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional; Region: PRK10714" /db_xref="CDD:182669" misc_feature complement(2255655..2256206) /locus_tag="Acear_2145" /note="Bacterial DPM1_like enzymes are related to eukaryotic DPM1; Region: DPM1_like_bac; cd04187" /db_xref="CDD:133030" misc_feature complement(order(2255934..2255936,2256189..2256191, 2256195..2256197)) /locus_tag="Acear_2145" /note="Ligand binding site [chemical binding]; other site" /db_xref="CDD:133030" misc_feature complement(order(2255934..2255939,2256096..2256098)) /locus_tag="Acear_2145" /note="Putative Catalytic site [active]" /db_xref="CDD:133030" misc_feature complement(2255934..2255942) /locus_tag="Acear_2145" /note="DXD motif; other site" /db_xref="CDD:133030" gene complement(2256223..2256630) /locus_tag="Acear_2146" /db_xref="GeneID:9514205" CDS complement(2256223..2256630) /locus_tag="Acear_2146" /note="InterPro IPR007267; KEGG: bld:BLi00882 hypothetical protein; PFAM: GtrA family protein; SPTR: C6PPV4 GtrA family protein; PFAM: GtrA-like protein" /codon_start=1 /transl_table=11 /product="GtrA family protein" /protein_id="YP_003828699.1" /db_xref="GI:302392879" /db_xref="GeneID:9514205" /translation="MKYISLQFVKFSLIGVINTINHNLIYLLMIWLDIHYFISNIVAF TLSLIISFFLNCIFTYKVQPTVKKFMVFPLSYLPNLFMQLIGIIFIIEVLEVPEYLGG LLSTIIALPLTYLVMTYILNENEEGEIKTDGQT" misc_feature complement(2256271..2256603) /locus_tag="Acear_2146" /note="GtrA-like protein; Region: GtrA; cl00971" /db_xref="CDD:193991" gene complement(2256662..2257273) /locus_tag="Acear_2147" /db_xref="GeneID:9514206" CDS complement(2256662..2257273) /locus_tag="Acear_2147" /note="KEGG: eel:EUBELI_01616 hypothetical protein; SPTR: C4Z317 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828700.1" /db_xref="GI:302392880" /db_xref="GeneID:9514206" /translation="MNKCKKNIMYLLCISLCIWYIVVLYWIWHPNPPSIEYDLYYIEN KLIDWSGYRGLKYKLGNKLFFGTNDNKMRKIKHRGKGWSYKEKTGNWTKGNKAYLYFT INEEVPTNLQMSIYANAFAPEGNQVVDVIFNDKKIGVLNMKHSKLKKYNVKIPNEVVK EDHFNQIEFVIHKPNSPYQYGLSDDKRLLGMRVRWLELDLLQR" gene complement(2257284..2258402) /locus_tag="Acear_2148" /db_xref="GeneID:9514207" CDS complement(2257284..2258402) /locus_tag="Acear_2148" /note="KEGG: eel:EUBELI_01614 hypothetical protein; SPTR: A8RKN2 Putative uncharacterized protein; PFAM: Mannosyltransferase (PIG-V))" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828701.1" /db_xref="GI:302392881" /db_xref="GeneID:9514207" /translation="MVQFNNRRERIYFILTLVLLSIITYWLSNVVWNMLHNTNNTFVS SLMQWDAGWYKYTIENGYSLEPTNGAQANWAFFPLYPLIVKLFKILTGLSVYQSGFIV SNIFLTIALYIIFEYVSMTRSQSFAFSAVILFALGPYSFYFSSLYTESLFLCLLILCF YNLQRENWLYCGIFGALLSATRTTGVLFFIPLLLRMFLIYFKTSKNLFDIVVQVLKDE KKLLALLLVPTGLFAYMTFLHFHLGDALAFKHVQKAWWRTNGNPIFTLYDNLVFGNYR SKYLSLWGILGIIGSTYLLYKKRFEEGIFALVSIIIPMMSGVQSLPRYFIGTLVLIFA YNDIINQTKKYKWLIVITLVSFNILLLFLWFGGHVITI" misc_feature complement(<2257908..2258294) /locus_tag="Acear_2148" /note="Mannosyltransferase (PIG-V)); Region: Mannosyl_trans2; cl02342" /db_xref="CDD:121251" gene 2258547..2258761 /locus_tag="Acear_2149" /pseudo /db_xref="GeneID:9514208" gene 2259967..2260269 /locus_tag="Acear_2151" /db_xref="GeneID:9514210" CDS 2259967..2260269 /locus_tag="Acear_2151" /note="InterPro IPR002514:IPR009057; KEGG: hor:Hore_13730 transposase IS3/IS911 family protein; PFAM: transposase IS3/IS911 family protein; SPTR: B8CXV6 transposase IS3/IS911 family protein; PFAM: transposase" /codon_start=1 /transl_table=11 /product="transposase IS3/IS911 family protein" /protein_id="YP_003828702.1" /db_xref="GI:302392882" /db_xref="GeneID:9514210" /translation="MGEKRKSYTEEFKKDAVELSNRSDKTVKDVSENLDIPYGTLVRW RREYKDKGDLAFPGHGKQKLTSEQKEIQRLKKELKDAKTERDILKKAVSIFSNEPK" misc_feature 2259973..2260206 /locus_tag="Acear_2151" /note="Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed...; Region: HTH_Hin_like; cl01116" /db_xref="CDD:186341" gene 2260317..2261129 /locus_tag="Acear_2152" /db_xref="GeneID:9514211" CDS 2260317..2261129 /locus_tag="Acear_2152" /note="COGs: COG2801 transposase and inactivated derivatives; InterPro IPR001584:IPR012337; KEGG: hor:Hore_00290 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: B8D037 Integrase catalytic region; PFAM: Integrase core domain" /codon_start=1 /transl_table=11 /product="Integrase catalytic region" /protein_id="YP_003828703.1" /db_xref="GI:302392883" /db_xref="GeneID:9514211" /translation="MCQVLEVSRSGYYKWLNRKPSQREKINKKLKLKIAEIYWQHNGT YGSPRIHRVLRKEGYTVNIKRVARLMRIMGLKAIQKRKFKRTTNSNHDLPLKENLLKR DFDIDKPDKVWVSDITYISTKKGWLYLAVVIDLYSRKVVGYSMSKRINTDLIMSATKM AISRRNPEAGLIFHSDRGSQYASHKLQNLFKQHSIRSSMSRKGDCWDNAVAESFFGSL KTELVYHKKYLTRNQARLDIFEYIAGYYNKVRLHSYLNYMSPKNYEKERKMA" misc_feature 2260329..2261111 /locus_tag="Acear_2152" /note="putative transposase OrfB; Reviewed; Region: PHA02517" /db_xref="CDD:177368" misc_feature 2260635..2260982 /locus_tag="Acear_2152" /note="Integrase core domain; Region: rve; cl01316" /db_xref="CDD:194099" gene complement(2261432..2263207) /locus_tag="Acear_2153" /db_xref="GeneID:9514212" CDS complement(2261432..2263207) /locus_tag="Acear_2153" /note="InterPro IPR007016; KEGG: abu:Abu_0686 hypothetical protein; PFAM: O-antigen polymerase; SPTR: C6PW82 O-antigen polymerase; PFAM: O-Antigen ligase" /codon_start=1 /transl_table=11 /product="O-antigen polymerase" /protein_id="YP_003828704.1" /db_xref="GI:302392884" /db_xref="GeneID:9514212" /translation="MRIKKYILTSSTLLAILGVLMEINLFEMMGLNFSTTEITLLLFV FTCLFFLNIKKVINEICNLIKEERLLILLIVSSITVLILSTLFSQLFTEALKGDLRLL ICLVFGVLFSYLWKNDIVYKDVIKKVLFGLIFVYVFLALFQYLYSPLNKLMVNIFAGG NLHYAVGLPRVTGTMVHPNLFGWFLLIGLVFGLNDMKLKTYIKKYPLLGLLFVSLVSL ALVFVQSRNVWLVFILAMVSTIILSEFKHIKIFAFIGCIAILVFIFLLCPNRFDISKQ INAAYSQVIQYASHAFSTKNKDKNVLLSFDRLIIKNVKSNGNLKNKKTELSKGFVVNS NVIELDEKFGPIKYRGYSLDKGYLNLLFSTNKNLSSKNAFWIHAKRKGKQKNLDLPFS YQIIQNDKYTLQIPIAALSRGVYDVKIGVWKPDKNKCLTINGFQDKSNWNSKSSRITL WKAAIKMGLTHPLTGVGRGVFKKVFPNYVFTDVNKNWLKRNKGVFQAHNIYLSWFSEF GILGFVVILSFVLYIIYKTSLLTSLKIVPMWIVIFGSGVLDDHSHGYLFVILSIMFSY IIFEQYNNKQNGEWVDDESKSSNCT" misc_feature complement(2261657..>2261917) /locus_tag="Acear_2153" /note="O-Antigen ligase; Region: Wzy_C; cl04850" /db_xref="CDD:194980" gene complement(2263252..2264379) /locus_tag="Acear_2154" /db_xref="GeneID:9514213" CDS complement(2263252..2264379) /locus_tag="Acear_2154" /note="COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: ctc:CTC00268 mannosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Q899B7 Mannosyltransferase; PFAM: glycosyl transferases group 1" /codon_start=1 /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_003828705.1" /db_xref="GI:302392885" /db_xref="GeneID:9514213" /translation="MKIGIDTRSLLLPITGIGRYTQQIIKHLHKVKKSTDEIIYFWGA GYEETDYMIDDIGKSEHTHNLGLRGTQTLWEQFILPRRISKHNLDVFHSPRNYNLPFL SFNREVSLIVTMHDTLPFLFPEQYPYSRLVKWRWHLATRKADKIITVSKNSKKDLLKT FKNLKDDDIIVNYCGLDEKFFFNNIDRERLDEVKNKYDLNKPYILTTGGTEPIKNSKM LFEVMKYLTDMNVELAIVGAKWPGEEIPKGKPDNVKFTGYVEEKDFPVLMNGAEIFVF PSLYEGFGLPPLEAMGAGTMVIASNKASVPEVIGDAGILLEPKDIDGWVEAIKSALAD EKKKKKYVNKGLERVNKFSWTKTAEELYSIYEKEVWKKNNK" misc_feature complement(2263264..2264379) /locus_tag="Acear_2154" /note="Glycosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaG; COG0438" /db_xref="CDD:30787" misc_feature complement(2263297..2264376) /locus_tag="Acear_2154" /note="This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the...; Region: GT1_mtfB_like; cd03809" /db_xref="CDD:99981" gene complement(2264380..2265891) /locus_tag="Acear_2155" /db_xref="GeneID:9514214" CDS complement(2264380..2265891) /locus_tag="Acear_2155" /note="COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: sub:SUB1031 exopolysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: Q6WNI0 Putative uncharacterized protein (Fragment); PFAM: polysaccharide biosynthesis protein" /codon_start=1 /transl_table=11 /product="polysaccharide biosynthesis protein" /protein_id="YP_003828706.1" /db_xref="GI:302392886" /db_xref="GeneID:9514214" /translation="MAVNKIEKDKDKSEHFSTLLYHVLRYGIGGLTRAGASLGFTAIF TRIFLPAKFGYYNLVRSIVLFVTLMLTEWMKQAINRYLPSLEDLNEKRIAKNTIVLYI LLFTIFLLILNIIILFIKPYFGIWFNKLCFATVSLIWGLSIYKVCLQVLSAEIKSNYH TLIKTLRSMGRLFLPLILVFLISKKVEYLVWGEAIGTFLIIPFMWKLADLELSITYII KHIKIIKTNIIKYFKYGSPMIGWFLAYILLAIGDRYIIQIFRGAKEVGIYSANYSLIA GGTELVAAPFLLIAHPYLVKMWNQKSKEEVQQLISDTTNWFIYMASVLIIALMFLSKP ITNILLGVKYRVGYWVIPIAGTGLLIWHLSMYGHKPLEFEEDTKRMMLGGLGVAALNV MLNIILVPHFGYMAAAYTTLISYLSYAVLIYFSVKKYMDWIIPFRQVFRKIIWVLVGG LIATVFLREFKNLGFFSKHIIAIFIYGVIAVIVPLRQEGINLKQVLNKFKEAL" misc_feature complement(2264443..2265855) /locus_tag="Acear_2155" /note="Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]; Region: RfbX; COG2244" /db_xref="CDD:32425" gene complement(2265971..2266948) /locus_tag="Acear_2156" /db_xref="GeneID:9514215" CDS complement(2265971..2266948) /locus_tag="Acear_2156" /EC_number="5.1.3.2" /note="COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR005886:IPR001509:IPR016040; KEGG: taf:THA_716 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: B7IGH2 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase" /codon_start=1 /transl_table=11 /product="UDP-galactose 4-epimerase" /protein_id="YP_003828707.1" /db_xref="GI:302392887" /db_xref="GeneID:9514215" /translation="MEKTILVVGGAGYIGSHQVKMLAKRGYEVVVYDNLSTGYRDLVT VDNFEKGDLADKDRLKEVFSRYDIDAVMHFAAFIQVGESVKNPAKYYKNNVVNVINLL DVMLEYDVKYFIFSSTAAVYGEPEEIPIKEGQAKKPISPYGKSKLMVEQILEDYDRAY NLRYTCFRYFNASGADESGRIGEKHDPETHLIPLVLQTALGERDEIYIFGTDYDTRDN TCIRDFIHVNDLADAHIRGLERLFEGDNSEVFNLGSGDGYSVREIIDKAKEITQVNFK VVEDDRREGDPAVLIADSSKATQMLAWEPKYNLEDIIRTAWNWHKSEKI" misc_feature complement(2265980..2266942) /locus_tag="Acear_2156" /note="UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]; Region: GalE; COG1087" /db_xref="CDD:31284" misc_feature complement(2265986..2266939) /locus_tag="Acear_2156" /note="UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs; Region: UDP_G4E_1_SDR_e; cd05247" /db_xref="CDD:187558" misc_feature complement(order(2266433..2266435,2266439..2266444, 2266511..2266513,2266523..2266525,2266595..2266603, 2266670..2266672,2266715..2266717,2266721..2266729, 2266790..2266798,2266835..2266852,2266907..2266918, 2266922..2266924)) /locus_tag="Acear_2156" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:187558" misc_feature complement(order(2266481..2266489,2266493..2266498, 2266505..2266507,2266517..2266519,2266526..2266528, 2266631..2266633,2266640..2266645,2266649..2266654, 2266661..2266666,2266673..2266678,2266685..2266693, 2266697..2266699)) /locus_tag="Acear_2156" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187558" misc_feature complement(order(2266511..2266513,2266523..2266525, 2266595..2266597,2266667..2266669)) /locus_tag="Acear_2156" /note="active site" /db_xref="CDD:187558" misc_feature complement(order(2266091..2266093,2266100..2266102, 2266169..2266171,2266277..2266279,2266283..2266285, 2266289..2266291,2266322..2266333,2266376..2266384, 2266436..2266444,2266523..2266525,2266589..2266597)) /locus_tag="Acear_2156" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187558" gene complement(2266990..2267691) /locus_tag="Acear_2157" /db_xref="GeneID:9514216" CDS complement(2266990..2267691) /locus_tag="Acear_2157" /EC_number="2.7.8.6" /note="COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: cpf:CPF_0595 sugar transferase family protein; PFAM: sugar transferase; PRIAM: undecaprenyl-phosphate galactose phosphotransferase; SPTR: C6JI65 Putative uncharacterized protein; PFAM: Bacterial sugar transferase" /codon_start=1 /transl_table=11 /product="undecaprenyl-phosphate galactose phosphotransferase" /protein_id="YP_003828708.1" /db_xref="GI:302392888" /db_xref="GeneID:9514216" /translation="METSATKNDDIESIQGDANELHKVESNYIYNAVSRGLDIVLASV GMILLAPVFIIVAYKIKKNDGGNIFFKHTRIGKDTEEFKMYKFRTMVPNAEEKLQEVL ENDEELRKEFYENFKLKDDPRITEIGDFLRKTSLDELPQLINIIKGDMSLVGPRPVVD DELEMHYKGTGDIVFSVKPGLTGMWQVNGRSDVEDYEERIALDLKYVKERSLLLDMKI ILKTIKSVIKREGAY" misc_feature complement(2266993..2267589) /locus_tag="Acear_2157" /note="Bacterial sugar transferase; Region: Bac_transf; cl00939" /db_xref="CDD:193981" gene complement(2268271..2269581) /locus_tag="Acear_2158" /db_xref="GeneID:9514217" CDS complement(2268271..2269581) /locus_tag="Acear_2158" /EC_number="1.1.1.22" /note="COGs: COG1004 UDP-glucose 6-dehydrogenase; InterProIPR017476:IPR001732:IPR014026:IPR014027:IPR 016040:IPR008927; KEGG: bld:BLi03804 TuaD; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: Q65E94 TuaD; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase" /codon_start=1 /transl_table=11 /product="nucleotide sugar dehydrogenase" /protein_id="YP_003828709.1" /db_xref="GI:302392889" /db_xref="GeneID:9514217" /translation="MKLSVFGTGYVGLVSGACFAELGHEVICVDIDEEKIEGLRNGVM PIYEDGLKEIVDRNYANGNLKFTTLPAEGVTESDIIFIAVGTPSDNEGGADLSAVEAV VESIAENINDYKIVVDKSTVPVGTGDWVEEMIEEQKEADYEFDVVSCPEFLREGTAVD DTMNPDRVVIGTESEKAAEVMDELHQDFEAPILHTDRYSAEIIKYAANAFLATKISFI NEIANICERTGGNVQEVAKGIGSDHRISDKFLRAGVGFGGACFPKDTKAIVSTAAEHG YDFKIVDSTVEVNEAQKKTLVNKLRQEMSDLEDKKIAVLGLSFKPNTDDMREAPSRTV VKQLLDDGAEVKAYDPVAMEEAEKIFGDSIEYSEDAYDAIDDTEAVILVTEWDEFQNL DLDRVKELLNNSLFIDGRNCYEPEKMKEQGFTYYSVGRKAINVK" misc_feature complement(2268334..2269581) /locus_tag="Acear_2158" /note="Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]; Region: Ugd; COG1004" /db_xref="CDD:31208" misc_feature complement(2269045..2269581) /locus_tag="Acear_2158" /note="Rossmann-fold NAD(P)(+)-binding proteins; Region: NADB_Rossmann; cl09931" /db_xref="CDD:195929" misc_feature complement(2268706..2268987) /locus_tag="Acear_2158" /note="UDP-glucose/GDP-mannose dehydrogenase family, central domain; Region: UDPG_MGDP_dh; pfam00984" /db_xref="CDD:144540" misc_feature complement(2268337..2268645) /locus_tag="Acear_2158" /note="UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; Region: UDPG_MGDP_dh_C; pfam03720" /db_xref="CDD:190725" gene complement(2269749..2270858) /locus_tag="Acear_2159" /db_xref="GeneID:9514218" CDS complement(2269749..2270858) /locus_tag="Acear_2159" /note="COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: dsa:Desal_2046 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: C6BVD1 glycosyl transferase group 1; PFAM: glycosyl transferases group 1" /codon_start=1 /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_003828710.1" /db_xref="GI:302392890" /db_xref="GeneID:9514218" /translation="MSKRLLFMNTGTGWGGVEKWHYKTASALQKREYDIFILGIKDEM FYNKCKDAGLKVDSIDHIGDVTFVNPFRLYWLVRYLKKNMIDAIFLCQSSHFKYGSLA AKLAGVETIVYRRALAKPIKNKFYNRWLLKYCVTDFMSISKVTRDKNLKNIPTDYLSK EKLKLIYKGVKKDKFIDPEITSDLREEFNIKDDELIIGNVGRLCRQKAQQYLIEALPQ VLKEFEKFKVLLVGSGKKGEVFKDRVKELGLEDKVIFTGFREDIPSILKQLDFMVHTA IYEGGAPWVILEAMMAGVPIVTTEATTISEFVIDGENGYLAENKNSTDIAEKILKMIK HPEREKLGQQGAEIAKKKFSFQKMIDEIEEKILNN" misc_feature complement(2269761..2270858) /locus_tag="Acear_2159" /note="Glycosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaG; COG0438" /db_xref="CDD:30787" misc_feature complement(2269767..2270819) /locus_tag="Acear_2159" /note="This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to...; Region: GT1_YqgM_like; cd03801" /db_xref="CDD:99974" gene complement(2270885..2271739) /locus_tag="Acear_2160" /db_xref="GeneID:9514219" CDS complement(2270885..2271739) /locus_tag="Acear_2160" /note="KEGG: pmo:Pmob_0975 hypothetical protein; SPTR: A9BJV4 Putative uncharacterized protein; PFAM: Sulfotransferase domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828711.1" /db_xref="GI:302392891" /db_xref="GeneID:9514219" /translation="MSRKEALKSNWKYKMDKIGMRLRLLGQQDWGPIDKFFIVSTGRT GTHFFAKFLNEFSSVYAIHEPHPTFLRLAISYACGEITDLKAVKKVERCRRALCREVK RKDADIYVESNNRLFSLLPVLREVFEDIKVIHIVRDGRDYVRSGMSRNWYTKEDDGSR LRAVYFEDDKYQDKWDEMTRFEKVCWEWQKKDSFIWQSVKDIDDAITVKFEDIFKDNK FKGMYRIADYIGLSEDKTEKVINRMMNQKASSTTDYAIPHWTDWNQEMMDKFDRIAGG HMKNYYNY" gene complement(2271778..2272929) /locus_tag="Acear_2161" /db_xref="GeneID:9514220" CDS complement(2271778..2272929) /locus_tag="Acear_2161" /note="COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: tye:THEYE_A1549 WabG; PFAM: glycosyl transferase group 1; SPTR: Q1Q2V6 Similar to lipopolysaccharide core biosynthesis protein; PFAM: glycosyl transferases group 1" /codon_start=1 /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_003828712.1" /db_xref="GI:302392892" /db_xref="GeneID:9514220" /translation="MKIALVHKQYTTHGGTERYMVNLSNFLAEEGHEVHVFTGSWDEE VANDEIIFHKTAYFGKKLGIDKYVFAKSAYKEVQKYDFDIIQTFSRTGFGDVIRIGGG CHEVYVDKMMELIDNPLYESIKRLESKLSLSEYLTKYYEAQDFKPGNYKKIVAISQTV KDQIMDVYQVPEKDIVINYNGVDVNQFKPENQEEYRDEIRTKHGFSDEDMVLLFVGTG FKRKGLKYVLQAMAQVDEVELLVVGKGKVNEFKKMAANLNVNERVEFVGASSNVEAYY AAGDVFVLPTIYEPFGSVVTEALASGLPAITSQAAGSAEVLEEGKDGFVLEPVDNVEQ LSIYIKQLKDQSLRDEMSQAAREKALKYSEKRNHQNMLDIYANILEYKL" misc_feature complement(2271784..2272929) /locus_tag="Acear_2161" /note="Glycosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaG; COG0438" /db_xref="CDD:30787" misc_feature complement(2271805..2272926) /locus_tag="Acear_2161" /note="This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to...; Region: GT1_YqgM_like; cd03801" /db_xref="CDD:99974" gene complement(2272969..2273856) /locus_tag="Acear_2162" /db_xref="GeneID:9514221" CDS complement(2272969..2273856) /locus_tag="Acear_2162" /note="KEGG: pmo:Pmob_0975 hypothetical protein; SPTR: A9BJV4 Putative uncharacterized protein; PFAM: Sulfotransferase domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828713.1" /db_xref="GI:302392893" /db_xref="GeneID:9514221" /translation="MKQSKLSKLLSDIKKVPYRIDEIRMKAGLLGFQEWQGIDKYFII STGRTGTKFFAKFLDEFSDIYSIHEPEPDSTLVRLAIDYARRKISKQNAIEKVEQIRR AMCKDVKRKKASSYIESNNRLFSLIPVLREVFEDIKIIHIVRDGRDYVRSGMSRDWYV EEDDAYRLQANYFEEDKYYNQWTNMTRFEKISWMWQKKDKFIYRSVKKADDSITVKFE DIFKDEDYKGLYRIAEYINLPENELKQMIDKMMNKRVNSTKEYAIPHWTEWNQKLRNK FDNIAGEHMKKYYNYNWNN" gene complement(2273905..2274762) /locus_tag="Acear_2163" /db_xref="GeneID:9514222" CDS complement(2273905..2274762) /locus_tag="Acear_2163" /note="InterPro IPR011009; KEGG: tau:Tola_0023 hypothetical protein; SPTR: C4L777 Putative uncharacterized protein; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828714.1" /db_xref="GI:302392894" /db_xref="GeneID:9514222" /translation="MRLNKKIRDNKTKVYYDDELKNNLVEKVLSCVNGQCSDDNFSLI DKSTGRRVFKLEFGNKSYYIKKYSYRKVSKRIKNLFRPSEAFRAFKKCKQLLAAEVSV VKPVLAITYRHDIWTVDSLFITEDFQGMNLRDYLAYEDYSLELKREIIKRLAEFWFEL YQLKFLNGDPNIVNILIRFNQEKFELGLVDVDNIKKLPFIPWKMVIKNLIKFTAHTYS NLDGFGRDKLDYEDRMLFFKEFFSYFNHQEDIDELIDYINQKTVEKLIDWDKKELIIS DKKLSDFYI" misc_feature complement(2274187..>2274510) /locus_tag="Acear_2163" /note="Protein Kinases, catalytic domain; Region: PKc_like; cl09925" /db_xref="CDD:195926" gene complement(2274790..2276001) /locus_tag="Acear_2164" /db_xref="GeneID:9514223" CDS complement(2274790..2276001) /locus_tag="Acear_2164" /note="InterPro IPR007016; KEGG: hor:Hore_18850 O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: B8CZB5 O-antigen polymerase; PFAM: O-Antigen ligase" /codon_start=1 /transl_table=11 /product="O-antigen polymerase" /protein_id="YP_003828715.1" /db_xref="GI:302392895" /db_xref="GeneID:9514223" /translation="MNFGGTRVDKAVVVNYLDKFIIGSLMLMMFSSAISIAGSSIGLG LAFIGWIIKLIITREIDFSGNPLNKPIGIFLLAMLISFIGSYDLAESLDGLEDFLLVF ILYYMVIDNVSDLKTVKKLFGMGLISIAISSTYGLFWQHYYLGVRRVNADFMALDFGA LLLIYLLFVVSYLLFGSVNLQGKVKYIVLSPLIALTLIYNKTRGAWLGFAGATFLTFW VKSKKWIPIFLVIILVVVSFAPQQIQNRIKSIVDLEDNKSNLGRLALWKGSLLMFEDH PVNGIGLGNFTDVYKKDYKQPNTASMAHAHNNFLNFLAETGIVGLAGFIYLLYSILKY LYINYLNLKQGYYRLFVLATSSSVVGVWIIQGVTETNFPKSVVSRTLWFLIALSVVII KLLKEQKDIKI" misc_feature complement(2275030..2275428) /locus_tag="Acear_2164" /note="O-Antigen ligase; Region: Wzy_C; cl04850" /db_xref="CDD:194980" gene complement(2276003..2276815) /locus_tag="Acear_2165" /db_xref="GeneID:9514224" CDS complement(2276003..2276815) /locus_tag="Acear_2165" /note="InterPro IPR000719:IPR010440:IPR011009; KEGG: fps:FP1636 hypothetical protein; PFAM: lipopolysaccharide kinase; SPTR: A6H030 Putative uncharacterized protein; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family" /codon_start=1 /transl_table=11 /product="Mn2+dependent serine/threonine protein kinase" /protein_id="YP_003828716.1" /db_xref="GI:302392896" /db_xref="GeneID:9514224" /translation="MELDYIKEKDDLGTRLIWIAEGWDGDRFRSYLDSFDRDFRAGNA IYDKRNLLTRIEPNKELGIKEDIAVKKFKLTRTYDKLRFCFLDSKAVRSLKIALALEE IGVKTPSPVAVVEKRGKFNKLLYSYFITEYVDYDYNLLDIAKDYDHSLRNKLKDWLPQ IARDVKRMHQAGVVHNDLHAGNILVKLTEEKPEFYYIDLNRGRIKSNLSQKQRVKDLA RFKLTSEEKEIFMEYYAPQHHQELLDLMIKQRERRQRLRQFKKKVRSLLGVR" misc_feature complement(2276114..>2276599) /locus_tag="Acear_2165" /note="Protein Kinases, catalytic domain; Region: PKc_like; cl09925" /db_xref="CDD:195926" gene complement(2277061..2278155) /locus_tag="Acear_2166" /db_xref="GeneID:9514225" CDS complement(2277061..2278155) /locus_tag="Acear_2166" /note="COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: dsa:Desal_2046 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: C4C275 glycosyltransferase; PFAM: glycosyl transferases group 1" /codon_start=1 /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_003828717.1" /db_xref="GI:302392897" /db_xref="GeneID:9514225" /translation="MKKILFLNSCVEWGGGEKWTFEAAEELDSRGYEVIVGSVAKSEL YQKAQRAGLRTKVVPVKGNLSALNPVKLFSFVKYLKQEEIDTIFLNLSQDLKFGGIGG RLAGVDQIIYRRGSAIPIKDRFYTKFLLEDCVTDIIANSKSTKETILENTVQWLSEDK IEIIYNGIKVDEIKSQKEGSDIRAEFGIDEDEVLIGNVGRLSRQKGHKYLVEAVKLLS EEINNFKVLVVGKGKLENKIKKQVKSLGVEEYIIFTGFRSDVYNIMEQIDFLLHTALW EGFGFVIAEAMAVGKPVVSTDVSNISEIMVDGQTGYLAESKNPADIAEKTIKMINTTK KEKMGRIGKNIIEDRFTFTRMIDQIEELYL" misc_feature complement(2277067..2278155) /locus_tag="Acear_2166" /note="Glycosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaG; COG0438" /db_xref="CDD:30787" misc_feature complement(2277106..2278149) /locus_tag="Acear_2166" /note="This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core; Region: GT1_WabH_like; cd03811" /db_xref="CDD:99982" misc_feature complement(order(2277310..2277312,2277376..2277378, 2277556..2277564,2278111..2278113)) /locus_tag="Acear_2166" /note="putative ADP-binding pocket [chemical binding]; other site" /db_xref="CDD:99982" gene complement(2278133..2278912) /locus_tag="Acear_2167" /db_xref="GeneID:9514226" CDS complement(2278133..2278912) /locus_tag="Acear_2167" /note="InterPro IPR001173; KEGG: hor:Hore_18870 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: B8CZB6 glycosyl transferase family 2; PFAM: glycosyl transferase family 2" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_003828718.1" /db_xref="GI:302392898" /db_xref="GeneID:9514226" /translation="MASLGALVLTYNEEENITDCLDSIDWVEEIVVVDSYSEDDTVEL AQQYTSKVYQREFDDFASQRNFGLEKLESEWVLVVDADERVTEELKEEVLDKLSNPQV EGYRVPRRNYFLGKWIKHCGWYPDYTLRLFKTAENSYSGLVHEGIELDGKVVELENDL IHYTYRNLDHYLDKMNHYTTLDAEKKYQAGVKKSLAYMLLRPVLEFIKKFFLKKGFLL GRQGLILSIFSFYYQFQKYVKLWEKYEVEPGSDSNEEDTIS" misc_feature complement(2278235..2278903) /locus_tag="Acear_2167" /note="UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide; Region: Beta4Glucosyltransferase; cd02511" /db_xref="CDD:133005" misc_feature complement(order(2278667..2278669,2278673..2278675)) /locus_tag="Acear_2167" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:133005" gene complement(2278912..2279931) /locus_tag="Acear_2168" /db_xref="GeneID:9514227" CDS complement(2278912..2279931) /locus_tag="Acear_2168" /note="COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002345:IPR002201; KEGG: hor:Hore_18880 lipopolysaccharide heptosyltransferase III, PFAM: glycosyl transferase family 9; SPTR: B8CZB7 Lipopolysaccharide heptosyltransferase III, PFAM: glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase III, ; lipopolysaccharide heptosyltransferase II" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 9" /protein_id="YP_003828719.1" /db_xref="GI:302392899" /db_xref="GeneID:9514227" /translation="MEAEVREPERIVVIDLLYMGDLLFATPFFRNLRQKYPEAKIDLI VNANFYDIIEDNPHFDEVYAYDKDWSITKSIQFARQLRSNDYDLGLNIHGNWRTAILL RIINPDYNVGYGTKGRGIWLDRSLVSSENKHMVEVYLDFLRELGFSGLDDKGLELEID PQAEESMEEFLASQGITEAERLVGLNTGGSWPTKQWMQEGFAQLADRLRWDYDSRVIF FGGPGDVERVEEIAAQMETEPVIAAGKTGLKELAALASFCDLFISGDTGPVHVAAAVG TPTIAIFGPSDETKYQPYGDQHQVVKTELNCRPCGEHHCPEEHHNCMADITVEDILEI VEEGM" misc_feature complement(2278921..2279910) /locus_tag="Acear_2168" /note="ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaF; COG0859" /db_xref="CDD:31200" misc_feature complement(2278921..2279904) /locus_tag="Acear_2168" /note="Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from...; Region: GT1_LPS_heptosyltransferase; cd03789" /db_xref="CDD:99964" misc_feature complement(order(2279119..2279121,2279128..2279133, 2279140..2279142,2279176..2279181,2279275..2279277, 2279374..2279379)) /locus_tag="Acear_2168" /note="putative active site [active]" /db_xref="CDD:99964" gene complement(2279921..2280997) /locus_tag="Acear_2169" /db_xref="GeneID:9514228" CDS complement(2279921..2280997) /locus_tag="Acear_2169" /note="COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: hor:Hore_18890 3-deoxy-D-manno-octulosonic-acid transferase domain protein; PFAM: glycosyl transferase family 9; SPTR: B8CZB8 3-deoxy-D-manno-octulosonic-acid transferase domain protein; PFAM: glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase II" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 9" /protein_id="YP_003828720.1" /db_xref="GI:302392900" /db_xref="GeneID:9514228" /translation="MNKKLDQIERILIIRLSAIGDVIHALPVAKAVRESYPEAEISWI VESKAQDLVVDNPNLDNVILLPKEEWKAEFKEAKWATLKRAKGFFDELTRKYDFDLAL DVHGLFKSGLTAYLSGADRIIGPGDCREGSWLFYDQQVELPDRIHQIDRNLTVAEAIG AESEEVSFDIAVTEEERERVEELLTDLEVNKEQPLVAINPFTSWSSKDWLPDRYALLA DRLISKLGCEVVFTGGPGDREGVAEIMELMAQPAYNLAGKTNLKELAEVYNRTDLFIG GDTGPMHLAVAMDTRVIALMGPTTAATHGPYGGQHIVIQPELDCIECWDRVCERNNEC MKEISGEEVFNAVREALGSDRNGS" misc_feature complement(2279933..2280970) /locus_tag="Acear_2169" /note="ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]; Region: RfaF; COG0859" /db_xref="CDD:31200" misc_feature complement(2279951..2280970) /locus_tag="Acear_2169" /note="Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from...; Region: GT1_LPS_heptosyltransferase; cd03789" /db_xref="CDD:99964" misc_feature complement(order(2280146..2280148,2280155..2280160, 2280167..2280169,2280203..2280208,2280302..2280304, 2280401..2280406)) /locus_tag="Acear_2169" /note="putative active site [active]" /db_xref="CDD:99964" gene complement(2280990..2282288) /locus_tag="Acear_2170" /db_xref="GeneID:9514229" CDS complement(2280990..2282288) /locus_tag="Acear_2170" /note="COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507:IPR001296; KEGG: hor:Hore_18890 3-deoxy-D-manno-octulosonic-acid transferase domain protein; PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; glycosyl transferase group 1; SPTR: B8CZB8 3-deoxy-D-manno-octulosonic-acid transferase domain protein; PFAM: glycosyl transferases group 1; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonic-acid transferase domain protein" /protein_id="YP_003828721.1" /db_xref="GI:302392901" /db_xref="GeneID:9514229" /translation="MIWYLLYNLLLTLLLLLFAPVLLYKMLIKGQYREGFKERLGFLP AEVSQWRTEDVIWIHAASVGETAAAASLVTELKERCPDHKILFSTMTDTGRNMAHKSI DEADGVIYFPLDFPWIVNKVLGRIKPELVIMIETELWPNFLKAAEKFDCKTMVASGRI SDGSLKSYKYFKPLLKKVLANIDILSMQSEQDADRILELGAVKERVWNNGNIKFDQEY GESGAELESELYDRFQLSDDQPVIVMGSTHDDEEEQLLPVYQRLKDNFPELVMILAPR YIERKEEITELYSQAGIDLVCRTEIEQRTDEPVILLDTIGELAQVYSIADLVFIGGSL IKRGGHNILEPAAQGKLVFFGPHMFNFKDNTRMVLEHGVGIQVGDSDELAEKMLYYLE NQEELEAKGRQARQMIEANQGAAERNAQLAAELIGVKSYE" misc_feature complement(2281011..2282219) /locus_tag="Acear_2170" /note="3-deoxy-D-manno-octulosonic-acid transferase; Reviewed; Region: PRK05749" /db_xref="CDD:180233" misc_feature complement(2281056..>2281997) /locus_tag="Acear_2170" /note="Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate...; Region: Glycosyltransferase_GTB_type; cl10013" /db_xref="CDD:186885" gene complement(2282362..2284449) /locus_tag="Acear_2171" /db_xref="GeneID:9514230" CDS complement(2282362..2284449) /locus_tag="Acear_2171" /note="COGs: COG1452 Organic solvent tolerance protein OstA; InterPro IPR005653; KEGG: hor:Hore_17430 organic solvent tolerance protein OstA; PFAM: OstA family protein; SPTR: B8CYX3 Organic solvent tolerance protein OstA; PFAM: OstA-like protein" /codon_start=1 /transl_table=11 /product="OstA family protein" /protein_id="YP_003828722.1" /db_xref="GI:302392902" /db_xref="GeneID:9514230" /translation="MAKKAVIWIAIMMIIFTIPVSAREAPFSIEADNLTIDRTAGFVK ARGEVEVDFGRKVLLAESVNIDLDTKDLLAEGNVVYREPNRELTGPKLLYNYGTKQGK FIDADGEIEGNKISGDEIKMIKGDFKIDNADLTTCESSDAHYKFTAEKVNIHPDDILI AEDVEVWLFGRHVFSYPVYKYSLKHNVELTPVPIIGYTSNSGYYMELDYEHFISRDLQ GDIHTRWTSRDANELRFDYDYDVTNDIELNPIFDYQEEEGWYSRFIFDGDFDYGFNLD FDAKYDRPKEVDRGEIIGDIKLRQQQGGLYWQLERDYHKEWNYSPQLTLGSFDSAVGK FGLISNLKYRIGDVYFDDRYDTGPFSTDEDDEDDDDETYNELDESSEIRRQDLKWTVW SEDYELGPDTTLDTDTVLRKAWYGTDQEYSSYQTGFYLEHGLEKVTDIEAGFDYVHEL GGRPEEFEAFKDELNDESSYLGWTGWRRYYDFVLDGHWITLGEDQKLKWEADVHRAVY EPGNSYDYYGYEANYRHTLTDSLLGILDYEYRRLPEDASWSIKDRDIEREEMSNYDEE FTDYDNSEAEYNPNLRDKINFGLDYEINSRQNNYFHAKGIMEYDLLSREYTTATLDLN YESKKQDHAYWSVDGKLKYDIIDNIYPTRTLEIKRVYDCMDLSLTFDWIEDEDEPEEP LERVVELKYEIKY" misc_feature complement(2282443..2284374) /locus_tag="Acear_2171" /note="Organic solvent tolerance protein OstA [Cell envelope biogenesis, outer membrane]; Region: Imp; COG1452" /db_xref="CDD:31641" gene complement(2284988..2285977) /locus_tag="Acear_2172" /db_xref="GeneID:9514231" CDS complement(2284988..2285977) /locus_tag="Acear_2172" /note="KEGG: hor:Hore_17440 hypothetical protein; SPTR: B8CYX4 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828723.1" /db_xref="GI:302392903" /db_xref="GeneID:9514231" /translation="MKKALSIGLIILLVVPVVSLNLQAEDLQPSFSLSKLQQVEKKLY GRNKEGEESLLQRIKDLEKQLYGRKMSGSLIERGERIFNLVLSNQPHRPSLCFTIGAL EWTLQQRVEQGPIKERLINLEKLLLGEKQSGSISSRMGNLINYSLPEGKIKVKEIEIP AQSLVKIEFLEKVSSDNISESREIKYRVVEDLLVDGRLVLPAGSVGTATVESVEKAKN FGQDGKIKLSFNEINLLDNTELRLILDEKAAEKNKSMKLALGASILGTAVLGPVGLVT GYFVKGEEEVIKPGQPFFVETKVPTVAFGLPIRPGMKENMDDKLKEKNKSGRE" gene complement(2285991..2286812) /locus_tag="Acear_2173" /db_xref="GeneID:9514232" CDS complement(2285991..2286812) /locus_tag="Acear_2173" /note="KEGG: hor:Hore_17450 hypothetical protein; SPTR: B8CYX5 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828724.1" /db_xref="GI:302392904" /db_xref="GeneID:9514232" /translation="MNSTTDDEVQEGKKLVKGITFYENQKKIDDKIDFFSKEEIIVQK KTGLELAVLPGVLVDGSYELTEGRMDSNLGFDIDYKLNHRLNLNAGYYLTGEQKSDGY NLAGMDSTDKKLDSSEESMENIQKIGIDYDTSERTSVFANYFKEDSADDEATTTVVGV KYNDDAEQIAFQYQIEELEEKRLNSTGVEIGINDFAKLKAIYTMIDDEAGDKVGKDSN FESKLLDLGLDLYVNDDTSVKLGYQLSDKNEADGSQEIWESLKPKEANVELEFKF" gene complement(2287090..2288778) /locus_tag="Acear_2174" /db_xref="GeneID:9514233" CDS complement(2287090..2288778) /locus_tag="Acear_2174" /note="InterPro IPR001119; KEGG: hor:Hore_17460 S-layer domain protein; PFAM: S-layer domain protein; SPTR: B8CYX6 S-layer domain protein; PFAM: S-layer homology domain" /codon_start=1 /transl_table=11 /product="S-layer domain protein" /protein_id="YP_003828725.1" /db_xref="GI:302392905" /db_xref="GeneID:9514233" /translation="MTKKVSIVLAIAMILALATPVMASPFTDVPADHWAYDAIKEVSE AGIVTGYEDGTFKGDEKLTRYEMAVIAARISSQVEEGEATDKVMEAAEALTAEFSDEL AALDNRVTALEDKGLNVKIGGEATTVFTDTNVEGTITGNEDQYWEDWDDTLDDDAPAQ EELKQEFDFDIQTIVDENTNVTLTLDTITDGFGDFTSWDGQTKDEDSKELSLDNALLA VTNPNYGLRIGDFEDYHVTDYFYNEEDVEGIEATANLFDTDLMVFKGQDDDTADQSDA QDILGLEAARNIAGIDVTGQYLEADEEGIYGVTAATELMPEVDSNVKYFAFDNDQENN YLVDGEVATKLAGINTTVGYKKVGENFEVVNTLKADDDIYDAGEDYEPGIKGVRVAGD MDVAPGLNVFASVEDEELANEDIFTTEVGAKYAVDETTTLSGSYELADADNDTTTLNA GLEGSYFDNKLATVVDYELEDIDNGEETSTLDIRNEYALTDATAVTGDVQYETVQGTK DTERTYYAVGADHKLTDSTTVGVNYRVLDFENNGTSAEEDYKAESINGELNIKF" misc_feature complement(2288575..2288706) /locus_tag="Acear_2174" /note="S-layer homology domain; Region: SLH; pfam00395" /db_xref="CDD:189531" gene complement(2289451..2289834) /locus_tag="Acear_2175" /db_xref="GeneID:9514234" CDS complement(2289451..2289834) /locus_tag="Acear_2175" /note="InterPro IPR006641:IPR012337:IPR005227; KEGG: ter:Tery_2021 resolvase, RNase H-like fold; SMART: Resolvase RNase H domain protein fold; SPTR: Q93DR3 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0081)" /codon_start=1 /transl_table=11 /product="Resolvase RNase H domain protein fold protein" /protein_id="YP_003828726.1" /db_xref="GI:302392906" /db_xref="GeneID:9514234" /translation="MILGIDPGRDKCGLALMIDKEEIEICEVVATDRILDRIEELIAE YRVNKIVIGDGTSSSELLDRLDSDGFEIHQVDETNSTLEARKLYWQSNPPSSWRRLVP TSFQTPPEAVDGYVAVILIRRYLAE" misc_feature complement(2289583..2289834) /locus_tag="Acear_2175" /note="Uncharacterised protein family (UPF0081); Region: UPF0081; cl00525" /db_xref="CDD:186059" gene complement(2289840..2291075) /locus_tag="Acear_2176" /db_xref="GeneID:9514235" CDS complement(2289840..2291075) /locus_tag="Acear_2176" /note="COGs: COG4372 Uncharacterized protein with the myosin-like domain; KEGG: hor:Hore_17480 uncharacterized protein with myosin-like domain; SPTR: B8CYX8 Uncharacterized protein with myosin-like domain; PFAM: protein of unknown function (DUF3084)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828727.1" /db_xref="GI:302392907" /db_xref="GeneID:9514235" /translation="MYNAILIAAVILISGLIAYIGDQIGMKVGRKRLSLFGLRPRHTS ILVTILTGILIATTTITLLLVTSRGVRMALFNMQAMVKELNTLNHKVEVKDNKLQDMQ QQIQAKGEELTSLKKQKEKINKQLKETSSEYEATQEKLKQTEGELTELTEVKEKLATK VDNLGQEVNSLEEKIEDLTGQKKKLEEKVNSLSYSLKFVGQKYLDSMVGDIVYQKGEV ISSKVIQGGQPDQEIVNKLDQFIVEANQAALDRGIEKQGSKRVIKMYEEDLLQTAKLL HQQGERMVVRLIAQKNTLKDEEVLAKFKLYEDYQVYQQDEVVAQTEIEEVGSLKQLEG KIETFLTEVNGQAIKDGLIPDGQGKVGSLGFSRFYSLFERINQAEKPVIIEIVALEDI WRSDSLTSNIEFVVQSKER" misc_feature complement(<2290116..2291063) /locus_tag="Acear_2176" /note="Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]; Region: COG4372" /db_xref="CDD:34081" misc_feature complement(2290845..2291063) /locus_tag="Acear_2176" /note="Protein of unknown function (DUF3084); Region: DUF3084; pfam11283" /db_xref="CDD:151724" gene complement(2291110..2292204) /locus_tag="Acear_2177" /db_xref="GeneID:9514236" CDS complement(2291110..2292204) /locus_tag="Acear_2177" /note="COGs: COG0795 permease; InterPro IPR005495; KEGG: hor:Hore_17490 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: B8CYX9 Permease YjgP/YjgQ family protein; PFAM: Predicted permease YjgP/YjgQ family" /codon_start=1 /transl_table=11 /product="permease" /protein_id="YP_003828728.1" /db_xref="GI:302392908" /db_xref="GeneID:9514236" /translation="MKIIDRYLLTELLSPLLFGIFAFTSIFVGTDILFELADLMIEWG VSAVTAGQLFILSLPEVIVLTFPMSMLLATLLSFGRLSGDSEVVALKAGGVSFIRLII PVLIVALLLSGLTILANETIVPQSKDAYRRIVWNIKHQEKMPTTQKNLRIAPLDKKTG KIDYIFYAYHFDGSDLTMEEVSLQDYQNGKLVQVIEAKRARWTDERWQFIDGTIYNVN SKDKVPTMEFETYTVKKLNREPKEISRAQKDPDEMSIEELNRHINLKEEEGKDVASLK VLYYQRYAIPFSCFIFALIGAPLGLQPNRSGASIGLGLSIVIIFIYYTLMTIGSTLGQ TGTLPPAVGAWLQNIIFGLVGTGLIIKMSR" misc_feature complement(2291113..2292204) /locus_tag="Acear_2177" /note="Predicted permeases [General function prediction only]; Region: COG0795; cl12074" /db_xref="CDD:189246" misc_feature complement(2291122..2292189) /locus_tag="Acear_2177" /note="Predicted permease YjgP/YjgQ family; Region: YjgP_YjgQ; pfam03739" /db_xref="CDD:190734" gene complement(2292214..2292930) /locus_tag="Acear_2178" /db_xref="GeneID:9514237" CDS complement(2292214..2292930) /locus_tag="Acear_2178" /note="COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: hor:Hore_17500 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8CYY0 ABC transporter related; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003828729.1" /db_xref="GI:302392909" /db_xref="GeneID:9514237" /translation="MTIRAENLVKTYDGVDVVDQVNFKVDPGEIVGILGPNGAGKTTT FYMVVGLIRPNQGRIYLNDQDVTDLSMHKRARAGIGYLAQEASIFRKLTVEENIRAIL EMIDRKEEDEEILNSLLDEFGIQDIRHQKGYTLSGGERRRAEIARALVTDPDYILLDE PFAGVDPIAVNDIQDIISYLKENDFGVLVTDHSVRETLEITDRAYIMHEGEILLSGTS EEIADSEIARKFYLGDKFRM" misc_feature complement(2292217..2292930) /locus_tag="Acear_2178" /note="ABC-type (unclassified) transport system, ATPase component [General function prediction only]; Region: YhbG; COG1137" /db_xref="CDD:31332" misc_feature complement(2292232..2292924) /locus_tag="Acear_2178" /note="The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in...; Region: ABC_YhbG; cd03218" /db_xref="CDD:72977" misc_feature complement(2292805..2292828) /locus_tag="Acear_2178" /note="Walker A/P-loop; other site" /db_xref="CDD:72977" misc_feature complement(order(2292355..2292357,2292451..2292456, 2292679..2292681,2292802..2292810,2292814..2292819)) /locus_tag="Acear_2178" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72977" misc_feature complement(2292679..2292690) /locus_tag="Acear_2178" /note="Q-loop/lid; other site" /db_xref="CDD:72977" misc_feature complement(2292499..2292528) /locus_tag="Acear_2178" /note="ABC transporter signature motif; other site" /db_xref="CDD:72977" misc_feature complement(2292451..2292468) /locus_tag="Acear_2178" /note="Walker B; other site" /db_xref="CDD:72977" misc_feature complement(2292433..2292444) /locus_tag="Acear_2178" /note="D-loop; other site" /db_xref="CDD:72977" misc_feature complement(2292349..2292369) /locus_tag="Acear_2178" /note="H-loop/switch region; other site" /db_xref="CDD:72977" gene complement(2292920..2293498) /locus_tag="Acear_2179" /db_xref="GeneID:9514238" CDS complement(2292920..2293498) /locus_tag="Acear_2179" /note="InterPro IPR005653; KEGG: pha:PSHAa2549 ABC transporter periplasmic substrate-binding protein; PFAM: OstA family protein; SPTR: A1HRI8 OstA family protein; PFAM: OstA-like protein" /codon_start=1 /transl_table=11 /product="OstA family protein" /protein_id="YP_003828730.1" /db_xref="GI:302392910" /db_xref="GeneID:9514238" /translation="MLLEKSKLLPIVLFSLAVITVTSLAGAKEAKEAGGEMEILADEM ILEKKSIVATGNVEVNSSQGRMTGDRFEVDNEAETGLMTGDPPVLVSQGWQVTGKRLE IDFAAEEVFVPQKAHLQSDTMEADAEQMRILYQKRQAVLTGDVVVVNQERRLTGQKVT IDLETERMSSKGRTKLTLPSSDLESESETNDN" misc_feature complement(2292998..2293387) /locus_tag="Acear_2179" /note="OstA-like protein; Region: OstA; cl00844" /db_xref="CDD:193952" gene complement(2293479..2294093) /locus_tag="Acear_2180" /db_xref="GeneID:9514239" CDS complement(2293479..2294093) /locus_tag="Acear_2180" /note="InterPro IPR010664; KEGG: hor:Hore_17520 protein of unknown function (DUF1239); PFAM: protein of unknown function DUF1239; PFAM: protein of unknown function (DUF1239)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828731.1" /db_xref="GI:302392911" /db_xref="GeneID:9514239" /translation="MNKRWLGLILSLILITGGIYWGLAADDGTDSPPSPSSQQEQTEE QVPQREASRVEINVSSDEGSTELKLIADRLSQSSSESELNLQQVVIKAYDKQGGATDL QATLTAPQGYYWPQKGRLEFEGPVEVQNDKVEIKADTLRWDQKENRWIGKGSIVIIHY QQEVKITGERFTAKVDLNKLHVTGNVRAAQYKPKAGEINAAREE" misc_feature complement(<2293518..2293730) /locus_tag="Acear_2180" /note="Organic solvent tolerance protein OstA [Cell envelope biogenesis, outer membrane]; Region: Imp; COG1452" /db_xref="CDD:31641" gene complement(2294117..2294995) /locus_tag="Acear_2181" /db_xref="GeneID:9514240" CDS complement(2294117..2294995) /locus_tag="Acear_2181" /note="COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: hor:Hore_18900 lipid A biosynthesis lauroyl acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: B8CZB9 Lipid A biosynthesis lauroyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase" /codon_start=1 /transl_table=11 /product="lipid A biosynthesis acyltransferase" /protein_id="YP_003828732.1" /db_xref="GI:302392912" /db_xref="GeneID:9514240" /translation="MGDFILYLLYRLLGLLVNILPEAIAYQIGKRFGDLAYWILPKRR QLARKNLQLALDIDDSKVNKLVRANFQHLGMVLIEFLRLGQLTEENIDEFIEIEGLKY LKQAQQDDRGFVLFTGHFGNWEVMGAALALQGFPINALARDQSNELINEDILATRESK GINIFPNKGLVIKQAYRALKRGEGLFVLGDQKSRHAEHYVELFGCKALTRLGTVELAA RTNSVVIPIYILRREDRGYKIIAKEPVEVPDNITDAEKKEIMSDLYNGLEEMIRKYPA QWMWMHDRWKGSPDIE" misc_feature complement(2294138..2294722) /locus_tag="Acear_2181" /note="Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like; Region: LPLAT_LABLAT-like; cd07984" /db_xref="CDD:153246" misc_feature complement(order(2294417..2294425,2294564..2294575, 2294624..2294626,2294630..2294632,2294639..2294641)) /locus_tag="Acear_2181" /note="putative acyl-acceptor binding pocket; other site" /db_xref="CDD:153246" gene complement(2295010..2295546) /locus_tag="Acear_2182" /db_xref="GeneID:9514241" CDS complement(2295010..2295546) /locus_tag="Acear_2182" /EC_number="3.1.3.45" /note="COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR013200:IPR010023:IPR006549; KEGG: hor:Hore_05100 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; PFAM: haloacid dehalogenase type 3; PRIAM: 3-deoxy-manno-octulosonate-8-phosphatase; SPTR: B8D241 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family" /protein_id="YP_003828733.1" /db_xref="GI:302392913" /db_xref="GeneID:9514241" /translation="MSQKEITKDNLKAKAERIKLFIMDVDGVLTDGRIILGEGGQELK FFHVQDGAGIKLAQRAGIKTAIITGRSSQAVTRRAEELDIGDVYQGIADKAAVLEELL DKHGLSLDEAAYIGDDLTDLSILSRVGLSLTVANGVAEVKEEADYITESLGGAGAIRE AIELVLKLQGVWTELLES" misc_feature complement(2295142..2295489) /locus_tag="Acear_2182" /note="Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others...; Region: HAD_like; cd01427" /db_xref="CDD:119389" misc_feature complement(order(2295340..2295345,2295469..2295477)) /locus_tag="Acear_2182" /note="active site" /db_xref="CDD:119389" misc_feature complement(2295460..2295477) /locus_tag="Acear_2182" /note="motif I; other site" /db_xref="CDD:119389" misc_feature complement(2295343..2295345) /locus_tag="Acear_2182" /note="motif II; other site" /db_xref="CDD:119389" gene complement(2295866..2296843) /locus_tag="Acear_2183" /db_xref="GeneID:9514242" CDS complement(2295866..2296843) /locus_tag="Acear_2183" /EC_number="5.3.1.13" /note="COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR000644:IPR001347:IPR004800; KEGG: hor:Hore_18910 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); hypothetical protein; PRIAM: Arabinose-5-phosphate isomerase; SMART: hypothetical protein; SPTR: B8CZC0 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein" /codon_start=1 /transl_table=11 /product="KpsF/GutQ family protein" /protein_id="YP_003828734.1" /db_xref="GI:302392914" /db_xref="GeneID:9514242" /translation="MELDADQIKSQAKRVLDIEKEAIENLSDSINGTFVELVEVILNC SGRVVMTGMGKSGLIAKKLAATFSSTGTPSFFLHPGEAVHGDLGMVTAKDIVIALSNS GETTEVIQILPVIKRIGARIIALTGNIDSTLAENADYFLDTSVEQEACPLDLAPTAST TATLALGDALAIALLESRGFEPEDFALYHPGGSLGKRLLLKVEDVMHVRERNPIVTQD QPLKKTLFTMTSTQMGAANIVNEAGKLVGVITDGDVRRKLEESPDLLQLPAKQVMTAD PVTITADKLAVEAVKIMQDKEINDLPVINDEQEPIGMVNFQDLLKAGVF" misc_feature complement(2295872..2296810) /locus_tag="Acear_2183" /note="D-arabinose 5-phosphate isomerase; Provisional; Region: PRK10892" /db_xref="CDD:182814" misc_feature complement(2296391..2296708) /locus_tag="Acear_2183" /note="KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-...; Region: SIS_Kpsf; cd05014" /db_xref="CDD:88409" misc_feature complement(order(2296544..2296546,2296676..2296678)) /locus_tag="Acear_2183" /note="putative active site [active]" /db_xref="CDD:88409" misc_feature complement(2295878..2296216) /locus_tag="Acear_2183" /note="This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with KpsF/GutQ domains in the API [A5P (D-arabinose 5-phosphate) isomerase] protein. These APIs catalyze the conversion of the pentose pathway...; Region: CBS_pair_KpsF_GutQ_assoc; cd04604" /db_xref="CDD:73104" gene complement(2296847..2297674) /locus_tag="Acear_2184" /db_xref="GeneID:9514243" CDS complement(2296847..2297674) /locus_tag="Acear_2184" /EC_number="2.5.1.55" /note="COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006218:IPR013785:IPR006269; KEGG: hor:Hore_18920 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: B8CZC1 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase" /codon_start=1 /transl_table=11 /product="2-dehydro-3-deoxyphosphooctonate aldolase" /protein_id="YP_003828735.1" /db_xref="GI:302392915" /db_xref="GeneID:9514243" /translation="MVKEVVLNEEIKFGNQRPFVLLAGPCAIESEERSLKVAEGIKEI TDRLGIPYVFKSSYDKANRSSIDSYRGPGLEEGLKILEKVKREFDLPVLSDVHTAEEA EYAADVLDIMQIPAFLSRQTDLVTAVGATGRVVNVKKGQFLAPWDIEQVVEKIESTNN QRILLTERGASFGYNNLVVDMRSLPRMRETGYPVVFDATHSVQLPGGAGDRSGGEREY VPHLARAAAGAGIDALFMEVHDRPEEALCDGPNMVRLDDLEDILRKIQAIDEIVKED" misc_feature complement(2296853..2297662) /locus_tag="Acear_2184" /note="DAHP synthetase I family; Region: DAHP_synth_1; pfam00793" /db_xref="CDD:189723" misc_feature complement(2296859..2297644) /locus_tag="Acear_2184" /note="NeuB family; Region: NeuB; cl00496" /db_xref="CDD:186036" gene complement(2297667..2298413) /locus_tag="Acear_2185" /db_xref="GeneID:9514244" CDS complement(2297667..2298413) /locus_tag="Acear_2185" /EC_number="2.7.7.38" /note="COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; InterPro IPR000215:IPR003329:IPR004528; KEGG: gur:Gura_2980 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; SPTR: A5G5T4 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno- octulosonatecytidylyltransferase" /protein_id="YP_003828736.1" /db_xref="GI:302392916" /db_xref="GeneID:9514244" /translation="MESKQVVGIIPARYGSTRLPGKPLLDICGEPMIQHVYKRAAEAE VFDRVIVATDDERIKERVENFGGEAVMTSTEHKTGTDRLAEAARRIEADIIVNIQGDE PLISPAMIEELVYPLLVDSTLVMSTLKQEIKDQEEVNNPDLVKVVTDKEGYALYFSRS PIPYLRNQETDSKFYKHIGLYAYQKSFLLKFAKLEATPLEQAESLEQLRALENGYRIK VVETEHASIGVDTEEDLKRVRNVMEEIENG" misc_feature complement(2297691..2298401) /locus_tag="Acear_2185" /note="CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide; Region: CMP-KDO-Synthetase; cd02517" /db_xref="CDD:133010" misc_feature complement(order(2298111..2298113,2298117..2298119, 2298177..2298179,2298258..2298260,2298375..2298383)) /locus_tag="Acear_2185" /note="Ligand binding site [chemical binding]; other site" /db_xref="CDD:133010" misc_feature complement(order(2297772..2297783,2297802..2297810, 2297817..2297822,2297895..2297897,2297922..2297942, 2297946..2297951,2297967..2297975,2297991..2297993, 2298042..2298044)) /locus_tag="Acear_2185" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:133010" gene complement(2298395..2299543) /locus_tag="Acear_2186" /db_xref="GeneID:9514245" CDS complement(2298395..2299543) /locus_tag="Acear_2186" /EC_number="2.7.1.130" /note="COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; InterPro IPR003758; KEGG: hor:Hore_18940 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: A1HU40 Tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase" /codon_start=1 /transl_table=11 /product="tetraacyldisaccharide 4'-kinase" /protein_id="YP_003828737.1" /db_xref="GI:302392917" /db_xref="GeneID:9514245" /translation="MNRSLEEYLLAVIRGHKQGFIARIVLIICSFLSNIFKLILKIRS KLYESGIIDSTELDSTVISIGNITAGGTGKTPVAQFLACRFKERGLQTAILNRGYKAD FDGRIGVVSDGRRVKMDATEAGDEAYLLAESLPEVPVVIGSRRAVTGEYAHSELGAEI VILDDGFQHWSLERDLDIVVVDATNPFANGRLMPRGTLREPLTSLARGDVFFLTKVDQ VSKDRLEEIKSKLKEYNATALVFETIHAPSYLRSLAEKEQADKNLDLTGKQVMALSGI GNPQSFEETLESLGAEVVKKVRFEDHHQYTEEEILNIFSSAAQQEVDLIITTEKDAVS MPPQVKEKITNQEIELKVLGIELEVLTEEFELESLLLKLEGTEWKANR" misc_feature complement(2298494..2299450) /locus_tag="Acear_2186" /note="tetraacyldisaccharide 4'-kinase; Region: lpxK; TIGR00682" /db_xref="CDD:161995" misc_feature complement(2298545..2299450) /locus_tag="Acear_2186" /note="Tetraacyldisaccharide-1-P 4'-kinase; Region: LpxK; cl03652" /db_xref="CDD:186597" gene complement(2299562..2300209) /locus_tag="Acear_2187" /db_xref="GeneID:9514246" CDS complement(2299562..2300209) /locus_tag="Acear_2187" /note="COGs: COG2121 conserved hypothetical protein; InterPro IPR007172; KEGG: hor:Hore_18950 hypothetical protein; PFAM: protein of unknown function DUF374; SPTR: B8CZC4 Uncharacterized protein conserved in bacteria; PFAM: Domain of unknown function (DUF374)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828738.1" /db_xref="GI:302392918" /db_xref="GeneID:9514246" /translation="MKRIKTYLVYLAALILVVVTNLTLRLQVTGEEKIKRLKEQGKKL IFVFWHGKMLVPIYHFRRRGYYGLASRSRDGEYISRVLKKLGWNVVRGSTSRGSVRAL LKLVKLLRQGEDVAITPDGPRGPRHETKLGTVYLAKKSSNSVIIPVGVAFNNKKVINS WDCFNLPYPFTRGSLCLGDPIEVSSEADGAELEAKREEVDDSLQAAFREAEELLN" misc_feature complement(2299595..2300149) /locus_tag="Acear_2187" /note="Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374; Region: LPLAT_DUF374-like; cd07983" /db_xref="CDD:153245" misc_feature complement(order(2299841..2299849,2299994..2300005, 2300045..2300047,2300051..2300053,2300060..2300062)) /locus_tag="Acear_2187" /note="putative acyl-acceptor binding pocket; other site" /db_xref="CDD:153245" gene complement(2300228..2301964) /locus_tag="Acear_2188" /db_xref="GeneID:9514247" CDS complement(2300228..2301964) /locus_tag="Acear_2188" /note="COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR017871:IPR003439:IPR017940:IPR003593:IPR 001140:IPR011527; KEGG: hor:Hore_18960 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: B8CZC5 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: lipid A export permease/ATP-binding protein MsbA" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="YP_003828739.1" /db_xref="GI:302392919" /db_xref="GeneID:9514247" /translation="MELVKRILAYVKPYRRRLAAAVVSMVLHSLMTLLFIKGFQDLID TMINNISNSGEGFVKLSWVAVGIVVVYFFKGVAYYGQKYLTSYVAQRAIMDIRNDLYC HLQNLSLGFYDEMKTGQIMSRVTNDVGKLQSAIVSGAVSLFYKSVTLIAGLGYLFYLS WQLSLAVLIIFPIVTYVFIKYNRRIREVSRRVQARIADVTDILQETITGVRIVKSFTQ EDYEYDRFSEQNHANFRANMKNTQLSASLTPIVEILASFIFTFVLWYGGYQVMKGLLT PGELLAFFTLLITISGPIKSLSKLSSTIQKALAAADRIFEIIDLEIDIEEKEDAIELE SAEGKVEFKDVWFSYDEDEMVLKGINLTANPGEVVALVGPSGAGKSTLVDLIPRFYEP QSGEVLLDGYDIKDLTIKSLRSKIGIVPQENILFGGSIGDNIAYGGIDKEQEEIIKAA KAANAHEFIMEFPDGYDTQIGERGTGLSGGQRQRVSIARAILNDPKILILDEATSDLD TESEALVQEALDRLMEERTTFVIAHRLSTVLNADKIVVLDEGEIAEQGTHEELLAQKG LYSHLYKMQFND" misc_feature complement(2300231..2301952) /locus_tag="Acear_2188" /note="lipid A export permease/ATP-binding protein MsbA; Region: MsbA_lipidA; TIGR02203" /db_xref="CDD:131258" misc_feature complement(2301083..2301913) /locus_tag="Acear_2188" /note="ABC transporter transmembrane region; Region: ABC_membrane; cl00549" /db_xref="CDD:193863" misc_feature complement(2300249..2300947) /locus_tag="Acear_2188" /note="MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic...; Region: ABCC_MsbA; cd03251" /db_xref="CDD:73010" misc_feature complement(2300825..2300848) /locus_tag="Acear_2188" /note="Walker A/P-loop; other site" /db_xref="CDD:73010" misc_feature complement(order(2300366..2300368,2300459..2300464, 2300702..2300704,2300822..2300830,2300834..2300839)) /locus_tag="Acear_2188" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:73010" misc_feature complement(2300702..2300713) /locus_tag="Acear_2188" /note="Q-loop/lid; other site" /db_xref="CDD:73010" misc_feature complement(2300507..2300536) /locus_tag="Acear_2188" /note="ABC transporter signature motif; other site" /db_xref="CDD:73010" misc_feature complement(2300459..2300476) /locus_tag="Acear_2188" /note="Walker B; other site" /db_xref="CDD:73010" misc_feature complement(2300441..2300452) /locus_tag="Acear_2188" /note="D-loop; other site" /db_xref="CDD:73010" misc_feature complement(2300360..2300380) /locus_tag="Acear_2188" /note="H-loop/switch region; other site" /db_xref="CDD:73010" gene complement(2301955..2303103) /locus_tag="Acear_2189" /db_xref="GeneID:9514248" CDS complement(2301955..2303103) /locus_tag="Acear_2189" /EC_number="2.4.1.182" /note="COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: hor:Hore_17530 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; PRIAM: Lipid-A-disaccharide synthase; SPTR: B8CYY3 Lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase" /codon_start=1 /transl_table=11 /product="lipid-A-disaccharide synthase" /protein_id="YP_003828740.1" /db_xref="GI:302392920" /db_xref="GeneID:9514248" /translation="MPTVLVVAGEASGDLHAAHVIKEMKKLHSDLEFIGLGGDKMAEA GVDIIFDPTELSTIGFMEALKHLRLMYKVLNQLEEAIKEYKPDAAFLVDYSGFNLKVA KLTNKYEIPTVNYFAPSAWVWGKWRAKKMARRQAKIASVFPMEAEVYREAGAEVNFVG HPLLDIVEPELTPEELAGRLNIDANSEIIGLLPGSRQQEIEKLLPPMLEAAEIIAAKR TEVEFLLPVAETVSEQLIEEMIDNYQVEVKLIAGHSYSVMDSARLLLVTSGTATLEAA CLNTPMVIIYQTSLLTWWLGKLLVKIPYVGLPNIIMDQEVVPELLQDQVSGTKIAEAG LEILGSKDDYQQIKQDLNEVVTRLGDTGATKRVAQMVLNTGGVTTDWN" misc_feature complement(2301985..2303103) /locus_tag="Acear_2189" /note="ipid-A-disaccharide synthase; Provisional; Region: PRK14089" /db_xref="CDD:184498" misc_feature complement(2301985..2303103) /locus_tag="Acear_2189" /note="lipid-A-disaccharide synthase; Reviewed; Region: lpxB; PRK00025" /db_xref="CDD:178802" gene complement(2303108..2303908) /locus_tag="Acear_2190" /db_xref="GeneID:9514249" CDS complement(2303108..2303908) /locus_tag="Acear_2190" /note="COGs: COG3494 conserved hypothetical protein; InterPro IPR010415; KEGG: hor:Hore_17540 hypothetical protein; PFAM: protein of unknown function DUF1009; SPTR: B8CYY4 Uncharacterized protein conserved in bacteria; PFAM: protein of unknown function (DUF1009)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828741.1" /db_xref="GI:302392921" /db_xref="GeneID:9514249" /translation="MNRVGLIAGNGRLPLYFAQAAKDKAREVVAVSVTEQALVNKLDS IVDESYELSVAKLDKLITKLQTAGIKEVVMVGKVNKDLMFNLDFDERMTKLLMNLEEK NDDAILLALVEELAAAGIKVKKQTTYLESLLPQLGTLTEIEPSPDIIKDMEFGFKMAK GIGDLDIGQTVVVKDRAVIAVEAIEGTDQAILRSGQLAEGVVAAKVSKPQQDFRFDIP TIGKDTIKNLIEIGAAGLVIEAAKTFILDRREVCQLADKAGLPIVAMR" misc_feature complement(2303117..2303740) /locus_tag="Acear_2190" /note="Protein of unknown function (DUF1009); Region: DUF1009; cl09182" /db_xref="CDD:158447" gene complement(2303927..2304739) /locus_tag="Acear_2191" /db_xref="GeneID:9514250" CDS complement(2303927..2304739) /locus_tag="Acear_2191" /EC_number="2.3.1.129" /note="COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR010137:IPR001451:IPR011004; KEGG: hor:Hore_17550 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR: B8CYY5 Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase" /codon_start=1 /transl_table=11 /product="acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase" /protein_id="YP_003828742.1" /db_xref="GI:302392922" /db_xref="GeneID:9514250" /translation="MKEVNKGNNIVHLAEVHETAIVKSGAKIGKNVKIGPYSVIGEHV EIGDGTEIGSHVVIEGWTEIGKNNEIFTGASIGQKPQDLKFDGEKSYLTIGDDNIIRE YATIHRGTEEGGLETKIGNDNLIMAYCHVAHDCQVGNNIVMSNATNLGGHVVVEDSAV ISGMVGVHQFVRIGKMTMIGAHSKVVKDVPPYILVDGHPATVNGINTVGLRRNGVNPE LRKEIKQAYKYLYRSNLNVSQAIEKMDQELDASPEIEHFLRFLHNAQRGICR" misc_feature complement(2303930..2304700) /locus_tag="Acear_2191" /note="UDP-N-acetylglucosamine acyltransferase; Provisional; Region: PRK05289" /db_xref="CDD:179994" misc_feature complement(2303936..2304694) /locus_tag="Acear_2191" /note="UDP-N-acetylglucosamine O-acyltransferase (UDP-GlcNAc acyltransferase): Proteins in this family catalyze the transfer of (R)-3-hydroxymyristic acid from its acyl carrier protein thioester to UDP-GlcNAc. It is the first enzyme in the lipid A...; Region: LbH_UDP-GlcNAc_AT; cd03351" /db_xref="CDD:100042" misc_feature complement(order(2304101..2304106,2304122..2304124, 2304197..2304199,2304233..2304238,2304284..2304286, 2304341..2304343,2304350..2304352,2304419..2304421, 2304488..2304490,2304497..2304499)) /locus_tag="Acear_2191" /note="active site" /db_xref="CDD:100042" gene complement(2304759..2305190) /locus_tag="Acear_2192" /db_xref="GeneID:9514251" CDS complement(2304759..2305190) /locus_tag="Acear_2192" /EC_number="4.2.1.-" /note="COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR013114:IPR010084; KEGG: hor:Hore_17560 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase;3-hydroxyacyl-(acyl-carrier-protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: B8CYY6 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase;3-hydroxyacyl-(acyl-carrier-protein) dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ" /codon_start=1 /transl_table=11 /product="3-hydroxyacyl-(acyl-carrier-protein) dehydratase" /protein_id="YP_003828743.1" /db_xref="GI:302392923" /db_xref="GeneID:9514251" /translation="MFDINEIKDILPHRYPFLLIDRILEFEEKERVVGLKNVTVNEEF FNGHYPEHPVMPGVLIVETMAQIGGFVMMDSNEENKEQLPYFAGIDKARFRKPVVPGD QLRIEAEVLKLRGKIGKISATASVDGEVAAEAKLMFAMQDK" misc_feature complement(2304768..2305160) /locus_tag="Acear_2192" /note="FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid...; Region: FabZ; cd01288" /db_xref="CDD:48033" gene complement(2305216..2306064) /locus_tag="Acear_2193" /db_xref="GeneID:9514252" CDS complement(2305216..2306064) /locus_tag="Acear_2193" /note="COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; InterPro IPR004463:IPR020568:IPR015870:IPR011334; KEGG: hor:Hore_17570 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; SPTR: B8CYY7 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase" /codon_start=1 /transl_table=11 /product="UDP-3-0-acyl N-acetylglucosamine deacetylase" /protein_id="YP_003828744.1" /db_xref="GI:302392924" /db_xref="GeneID:9514252" /translation="MHIDSKRQQTIKQEITYTGTGLHTGNQQITITCKPLTANSGIRF KRTDLPSAPEIEAVVDNIVSTKRSTSLGTDQWQISTVEHLLAALNGLKIDNLLIEIDA GEVPITDGSSLVFTELLQKAGIKQQNKKCEIHAIEEAVWAREGDTYLVALPGPELKIT YTFVSDHPAVGNQFGEFTIDEKTFINQIAPSRTFGFASEIEALQEEGLALGGSLDNAV LIGEEEIVNELRFEDEIVRHKILDIIGDLALIKPFRGHIIAVRSGHALNRRLAHKIKQ QVMHCW" misc_feature complement(2305219..2306049) /locus_tag="Acear_2193" /note="UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane]; Region: LpxC; cl00512" /db_xref="CDD:189111" misc_feature complement(2305240..2306043) /locus_tag="Acear_2193" /note="UDP-3-O-acyl N-acetylglycosamine deacetylase; Region: LpxC; pfam03331" /db_xref="CDD:146126" gene complement(2306140..2306874) /locus_tag="Acear_2194" /db_xref="GeneID:9514253" CDS complement(2306140..2306874) /locus_tag="Acear_2194" /note="COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: hor:Hore_17580 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B8CYY8 ABC transporter related; PFAM: ABC transporter" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter ATP-binding protein, PAAT family" /protein_id="YP_003828745.1" /db_xref="GI:302392925" /db_xref="GeneID:9514253" /translation="MLKVRELYKSYGEVQILKGVNFDVSQGETVIIMGPSGCGKSTTI RCINRLTEPDGGQIIYKGCDLLELNQAELLKARQDIGFVFQNFNLIDRLTVFDNIMLA LYKQDTLSLTDKEAVVEDSLNQVQLGDFSNRYPQDLSGGQKQRVAIARALALKPDLML LDEPTASLDPILVSEVLEVLESITANQNRTLLIVTHELDFAYRVADRILLMDNGKIVE EGPPEQVFENPTSEVGKKYNNLIRDH" misc_feature complement(2306164..2306874) /locus_tag="Acear_2194" /note="ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; Region: GlnQ; COG1126" /db_xref="CDD:31323" misc_feature complement(2306227..2306871) /locus_tag="Acear_2194" /note="P-loop containing Nucleoside Triphosphate Hydrolases; Region: P-loop NTPase; cl09099" /db_xref="CDD:158411" misc_feature complement(2306752..2306775) /locus_tag="Acear_2194" /note="Walker A/P-loop; other site" /db_xref="CDD:72971" misc_feature complement(order(2306287..2306289,2306386..2306391, 2306620..2306622,2306749..2306757,2306761..2306766)) /locus_tag="Acear_2194" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:72971" misc_feature complement(2306620..2306631) /locus_tag="Acear_2194" /note="Q-loop/lid; other site" /db_xref="CDD:72971" misc_feature complement(2306434..2306463) /locus_tag="Acear_2194" /note="ABC transporter signature motif; other site" /db_xref="CDD:72971" misc_feature complement(2306386..2306403) /locus_tag="Acear_2194" /note="Walker B; other site" /db_xref="CDD:72971" misc_feature complement(2306368..2306379) /locus_tag="Acear_2194" /note="D-loop; other site" /db_xref="CDD:72971" misc_feature complement(2306281..2306301) /locus_tag="Acear_2194" /note="H-loop/switch region; other site" /db_xref="CDD:72971" gene complement(2306914..2309346) /locus_tag="Acear_2195" /db_xref="GeneID:9514254" CDS complement(2306914..2309346) /locus_tag="Acear_2195" /note="KEGG: hor:Hore_17590 hypothetical protein; SPTR: B8CYY9 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828746.1" /db_xref="GI:302392926" /db_xref="GeneID:9514254" /translation="MEILKYRFRTDLLIWLIVVILVGSSLASGIGYLADNYFGDTVNS LMGDYGKYDFLLTVNQELTDSAMKEIKEVKEEKLPGSKLKKGITVAGTVNYFLQVDDK LRTKAVFSKVDNYFEEIIGVDNVSLMAEPKISLQGMIGDTKNFFNQKISKLSEVDFIL PTGSGLNIILKQSADLQETTEQIEGILDDYRLLQIRFPIAQSPEEITELNLNLRQKLQ KEFSSQEIQSLNSGQRRDLDDLIKTMTQMKKFLMEYATIVEAELPADLKVSATERFAL ASQEDGSLAVGDKITPETILLTPLQREDGLLQLIIKRGDGTEIGGQSLYLISQEGIVK QKFEVANIEQPRYLLQKAVGETKELVPKLASLVDTAEKVNQNFLNWLTEYRQGIDQIQ GLQEELVGQQDKLTSIVSDGSRDLEQLRAAVNDISAVTTSLEESVAEMYRLREKLIEI NSNFKGFERNLEKQVAALSLVGVEDERLTNLRDSVKTLQQKTDGEMDRIISRINSYNP LLNKLEEWNNNLKRVQQLLQAGSDLNLNSPELKGAVKGVVGDLDGIMAELGSLESGVK DLNQLNFKLIITELDHVQNVLPDLRDEEITGTIQLLDKYLAGQVVPGKELNFLVNQSV NQGALESKVEDYFAQQEYDIKQLFTAPGLLQPNVRGEFFRILGEVRAVLTAVIALVFT IFVLFMDQSLVMATIQRRNQQESNRLIKVLNSSYLYGFVLGGVVLSSIFYISQAKLPL LNLEYIFLIGSSLGMLAANKAGSINPLDEAEFLAGEALGLSYTEIMHEIVIPQGRPGV LTILNRRKMIFA" misc_feature complement(<2306968..2307336) /locus_tag="Acear_2195" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits...; Region: TM_PBP2; cl00427" /db_xref="CDD:193813" gene complement(2309764..2310423) /locus_tag="Acear_2196" /db_xref="GeneID:9514255" CDS complement(2309764..2310423) /locus_tag="Acear_2196" /note="KEGG: hor:Hore_17630 hypothetical protein; SPTR: A1HU28 Putative uncharacterized protein; PFAM: Bacterial lipoprotein (DUF940)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828747.1" /db_xref="GI:302392927" /db_xref="GeneID:9514255" /translation="MKLKKNANLLVITLLVGLMLTVGGTAVASTAFEGGFSGLIKTPT ADVLPYNKATVGYHHTDRANLVLFNYGAYDNFELGLSNYWYDDEVRADDDLFLNAKLQ LLEENNSQPAVSMGLVDEDFYAVASSNLDYDLRGHVGLGNGDFDGLFAGISKTINPVT ISTKEENNLQMPVTTLMMEYIDQEFNVGAKFKLTSEFNFNLAVEDLSDLSAGINFNTQ F" misc_feature complement(<2309767..2310321) /locus_tag="Acear_2196" /note="Bacterial putative lipoprotein (DUF940); Region: DUF940; pfam06082" /db_xref="CDD:147959" gene complement(2310429..2311460) /locus_tag="Acear_2197" /db_xref="GeneID:9514256" CDS complement(2310429..2311460) /locus_tag="Acear_2197" /note="COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterProIPR018357:IPR020573:IPR001451:IPR011004:IPR 007691; KEGG: hor:Hore_17640 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; SPTR: B8CYZ4 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase" /codon_start=1 /transl_table=11 /product="UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase" /protein_id="YP_003828748.1" /db_xref="GI:302392928" /db_xref="GeneID:9514256" /translation="MEVPLKELAELVDGEIIGEVELIISGVGGVENVAKGEITFAQSD EYLTKAESSLAAAVIVADEIESDKTLLKVDNPRLAFAKIAHEFEPELYKTNEIHSTAV IADDVECGSNVSIGPQVTIESGVSIGDNVRIAAGAHIGSQVKIGAETIIHPNVVIMHQ TEVGNRVIIHPGAVIGSDGYGFETTSEGHYKVPQLGNVIIEDDVELGANVTIDRGTTG STVIGRGTKTDNLVHIAHNVRIAADCLLVAQVGIAGSAEIGEGVTLAGKAGVVGHLEV GANTTVAAQSIITNDVPPDSFYSGYPAREHKSEMRIKAARRKLPAMVKELRELKKEVK SLKEEVKEG" misc_feature complement(2310495..2311460) /locus_tag="Acear_2197" /note="UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional; Region: lpxD; PRK00892" /db_xref="CDD:179158" misc_feature complement(2311200..2311400) /locus_tag="Acear_2197" /note="UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Region: LpxD; pfam04613" /db_xref="CDD:146990" misc_feature complement(2310531..2311145) /locus_tag="Acear_2197" /note="UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD): The enzyme catalyzes the transfer of 3-hydroxymyristic acid or 3-hydroxy-arachidic acid, depending on the organism, from the acyl carrier protein (ACP) to UDP-3-O-acyl-glucosamine to produce UDP-2,3-...; Region: LbH_LpxD; cd03352" /db_xref="CDD:100043" misc_feature complement(order(2310537..2310539,2310549..2310551, 2310600..2310608,2310642..2310644,2310654..2310662, 2310678..2310680,2310708..2310716,2310726..2310728, 2310732..2310734,2310750..2310752,2310762..2310764, 2310768..2310776,2310780..2310782,2310807..2310815, 2310822..2310824,2310828..2310830,2310834..2310836, 2310846..2310848,2310882..2310890,2310921..2310923, 2310927..2310929,2310945..2310947,2310951..2310953, 2310987..2310989,2310993..2310995,2310999..2311001, 2311038..2311040,2311092..2311097,2311107..2311109)) /locus_tag="Acear_2197" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:100043" misc_feature complement(order(2310609..2310611,2310642..2310647, 2310696..2310704,2310717..2310722,2310750..2310755, 2310762..2310764,2310774..2310776,2310915..2310923)) /locus_tag="Acear_2197" /note="active site" /db_xref="CDD:100043" misc_feature complement(order(2310642..2310647,2310696..2310701, 2310750..2310755,2310915..2310923)) /locus_tag="Acear_2197" /note="UDP-GlcNAc binding site [chemical binding]; other site" /db_xref="CDD:100043" misc_feature complement(order(2310609..2310611,2310702..2310704, 2310717..2310722,2310762..2310764,2310774..2310776)) /locus_tag="Acear_2197" /note="lipid binding site [chemical binding]; lipid-binding site" /db_xref="CDD:100043" gene complement(2311492..2311908) /locus_tag="Acear_2198" /db_xref="GeneID:9514257" CDS complement(2311492..2311908) /locus_tag="Acear_2198" /note="InterPro IPR005632; KEGG: hor:Hore_17650 outer membrane chaperone Skp (OmpH); PFAM: outer membrane chaperone Skp (OmpH); SPTR: A1HU26 Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like)" /codon_start=1 /transl_table=11 /product="outer membrane chaperone Skp (OmpH)" /protein_id="YP_003828749.1" /db_xref="GI:302392929" /db_xref="GeneID:9514257" /translation="MDKRLKLLLIGLTVLVLATGCAQQDKVAVVNMQEIVKKSSRIQN YQEQLDNKLQNLQTEYESELENIENEEKLEQKRQEAYQESQEIKSKIESKVKKDIQKA IAKVAEDNRIDVVLDQNNVKYGGVDITDKVIETLKN" gene complement(2311933..2313078) /locus_tag="Acear_2199" /db_xref="GeneID:9514258" CDS complement(2311933..2313078) /locus_tag="Acear_2199" /note="InterPro IPR005632; KEGG: hor:Hore_17660 hypothetical protein; PFAM: outer membrane chaperone Skp (OmpH); SPTR: B8CYZ6 Putative uncharacterized protein; PFAM: Outer membrane protein (OmpH-like)" /codon_start=1 /transl_table=11 /product="outer membrane chaperone Skp (OmpH)" /protein_id="YP_003828750.1" /db_xref="GI:302392930" /db_xref="GeneID:9514258" /translation="MQRKLWWKVGSLLVGILFVVQLMGCNNTLSIDKSSQNKSEAVSN KIGIVDLEELKAVHPEAEVLKELNKQIKDSQINLEEQQGFLNLTSQNREEHLQSINEQ INKRLQDIKSEYQTKIDERVEKTKEELNAYKESFKQETEEKFEQKKREIRAGLDQKID KRKEEQSTELQDYQQKLNKEYNRKILNLRLKLQMLDLSSKERKEYQQQLAKLETERKE KLAKKKEELQKKLQEYVSEQQKEAEEKLRSYHQKLTEQMQQKINNKQEEANQELQNYI KEQNQLLQQEIETKREELTTKLKNTIVETEEKLDTNITERNEELAANLEKVKEDRNRL EKKINEDIKERIAEVAEDKGLDVVLTNYSSSLSATNITEDVAVKLKE" misc_feature complement(2311939..2312373) /locus_tag="Acear_2199" /note="Outer membrane protein (OmpH-like); Region: OmpH; cl08146" /db_xref="CDD:195657" gene complement(2313114..2313608) /locus_tag="Acear_2200" /db_xref="GeneID:9514259" CDS complement(2313114..2313608) /locus_tag="Acear_2200" /note="InterPro IPR005632; KEGG: hor:Hore_17670 outer membrane chaperone Skp (OmpH); PFAM: outer membrane chaperone Skp (OmpH); SPTR: B8CYZ7 Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like)" /codon_start=1 /transl_table=11 /product="outer membrane chaperone Skp (OmpH)" /protein_id="YP_003828751.1" /db_xref="GI:302392931" /db_xref="GeneID:9514259" /translation="MFKENKLIKILALTLVLSLGIGAVVVLSPMVKAKSEVKKAVAYV DFGKLLKNHPKRDEVDAEFNQYYQNLKEELGSELQSKLEETSGDERQKLLQNYNQRLN EQVKQRQAELLQPLKEDIDATIKKVAAKEEVAVVLHKESVVYGGNDLTDKVLKAMEEQ TESN" misc_feature complement(2313138..2313476) /locus_tag="Acear_2200" /note="Outer membrane protein (OmpH-like); Region: OmpH; cl08146" /db_xref="CDD:195657" gene complement(2313630..2315360) /locus_tag="Acear_2201" /db_xref="GeneID:9514260" CDS complement(2313630..2315360) /locus_tag="Acear_2201" /note="COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: hor:Hore_17680 surface antigen (D15); PFAM: surface antigen (D15); surface antigen variable number repeat protein; SPTR: A1HRG2 Surface antigen (D15); PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein" /codon_start=1 /transl_table=11 /product="surface antigen (D15)" /protein_id="YP_003828752.1" /db_xref="GI:302392932" /db_xref="GeneID:9514260" /translation="MQNKSKFLVLLLTVAVFLASSNLVLAAQQELKNDNLITAIEVEG NKKISKEEILEVVETEVGEQISNQKLQNDLQAIFDLGYFFDVQASFESYRNGVKLIFE VVENPDLKSLEFKGNKSIASKKLKEILDLKEDKLLDTNQLNKGLREIEAYYNEQGYVL AQIEDVLMKKDGTLKVKINEGKVAKIKIEGNEKTKDFVIKRKLSLEPGDVFNADQMRQ DLRDIYNLGFFKDIKPELNQTSAEKNEVALNIKVEERKTGNVGVGAGYSSSDGWLGHF EIQEKNFRGRAQRLGFRWEVGEENTTYELSFYEPWAFGSDTSVSFSIYDRRDEKTGFY DPTDETDEGIDYEEHEKGGSITLGHPLGYDVQGYLTYEYNKTINEALEGETALPEGQE SNTRSLTSSFVRDTRNDVFNPTDGRKDKLSVEYAGQALGGDNDFTKYQLDLRDYTPDF MFEDNSWAFRFKAGLSEGLDEEGLDHERYRIGGPQTLRGFKDDQFVGEEIMLFNAEYR IPFADNFTGVLFTDAGKAWNKDEGFDFDDINKSAGVGVRFKTPMGQLRLDYGWQEEDS RLHFSIGQLF" misc_feature complement(2315043..2315252) /locus_tag="Acear_2201" /note="Surface antigen variable number repeat; Region: Surf_Ag_VNR; cl10520" /db_xref="CDD:195983" misc_feature complement(2314818..2315039) /locus_tag="Acear_2201" /note="Surface antigen variable number repeat; Region: Surf_Ag_VNR; cl10520" /db_xref="CDD:195983" misc_feature complement(2314596..2314817) /locus_tag="Acear_2201" /note="Surface antigen variable number repeat; Region: Surf_Ag_VNR; cl10520" /db_xref="CDD:195983" misc_feature complement(2313633..2314517) /locus_tag="Acear_2201" /note="Surface antigen; Region: Bac_surface_Ag; cl03097" /db_xref="CDD:155280" gene complement(2315393..2319787) /locus_tag="Acear_2202" /db_xref="GeneID:9514261" CDS complement(2315393..2319787) /locus_tag="Acear_2202" /note="COGs: COG2911 conserved hypothetical protein; InterPro IPR007452; KEGG: hor:Hore_17710 hypothetical protein; PFAM: protein of unknown function DUF490; SPTR: B8CZ01 Uncharacterized protein conserved in bacteria; PFAM: Family of unknown function (DUF490)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828753.1" /db_xref="GI:302392933" /db_xref="GeneID:9514261" /translation="MMPVARKYRRIIPWVVILILGASLFMTMSLKWDGVLTSIKDRLV MELESRYGYNVNLDKIEISGVNELKLYNFSLELKEDGFLSVEQVELSYDLLDIVAGKT DSLGSIKEIKLVSPRLIYKQTSNDQADDGTDNLQDLFGSAPILNHYSGRIAIEDGMAV TNLIDGISKIRINQAGLNLTKDNLKGRLDLTLPETETENLVVNGSTDENQFKLTTELD NLDLNVLSEEWKEVLTQKGFQLTAGKASGNLEIKGGLGFESFSELDYKGEIRLKEGII DSNDLTSKIQIIDSKFKLNNRVININSLVTDIGESRLQLSGLMHGWQKPTFYLEYKSS QLALSSIEEWLPSELKLTGMAKAKGRMRGSLDDPTIQTSLQLPVGSINGYQVIDLEFN LWYKNELLTFNDFKTEVAAGILTGRGTINWPKDEGVLYTASLEAEGIDLGQLSTISQA DSTLTGQVNSNLVISGQNSLTDLSLFGSAQVTDGTLMQYEFDTLDSSFWFSNNQLLIS DLNLKSDGSKWQAQGLIDDQRNLNLSITADDVKLSQLDGVHNYRDLAGTASLQGQVKG KLTDPEFSGEVQIKDASYAQRSVDEIIGVISYRQKRIGLNDVLINDQKRKYQLAGEIE LAKEPKLDLELKTKAGKVASLYKLISDQPIYDIHGRFSGSLRIIGPINELRMAGRINL LKGQIHGIGLTSGSSSFSWENDTLKLESIQLFGVESQLIGSGRIEKNGGLALDLEAEN IDLAKLELDNYDIIDSSTIQGSLDFTGEVRGDISRPVLAGEVKLNKLAVNRYNFQRVV GSVEYTGDKLDLRNLTAVQGATEYQAEGKLNLNKEKFSNLALELTNGQLNEVIELLPL KEVEHDIPHSFFGTMTINGEFEAPEVKGRLIAKDIDRNGYLLVDGSYDFGSGADLNVE TQDFALAPFNQLVPALEAIGGDLNLTAELEGELEKLDIESTVEIIDGRVGTLKYDNLK GGLALTKGKLVKLTEPLKLRVNDDNLFRITGYLPLKNREASLYLNINLDNGNLNLLPL LVEGVKTAEGTGNFDLTVSGSRAEPDFAGEVEIDSGRLDIAGLAESISNLEGRAEIKD QRLKLKYLTGRQGQGQFKAQGSMGVTGWQPGQIDLDFSGERIVIDHGSWQGENDLDIT VKGDITEPLISGSILVYDTKISLPFEWPTGKKDSDSAIKPNFDLNLEPGDNVRVQNDN IDILVESGSLQLVTIEDSIQLEGSVSSKIGSFNYYNTDFELESGSAIFDRYEGHIPYL NLTATTEVDNIQQSIEDKKQEEEDGEAIQNGSQEDAVNQVDAKEVLVTLKLSGLADQM EINLESNPSLSRQEIITLLAQQGGLQGFLTKDYDKMIRAEFFRMLESRIDVKILSNIE ETVEDKWNLDRFRIYTGFNSGLKIKMGKSITDDLMLKYNQDFDEDKEHSLGFEYQIMD SMKDIILNGSLNNDEEYKLELETNFSFN" misc_feature complement(<2317145..>2319415) /locus_tag="Acear_2202" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG2911" /db_xref="CDD:32735" misc_feature complement(<2317361..2317936) /locus_tag="Acear_2202" /note="Family of unknown function (DUF490); Region: DUF490; pfam04357" /db_xref="CDD:190952" misc_feature complement(2315399..2316502) /locus_tag="Acear_2202" /note="Family of unknown function (DUF490); Region: DUF490; pfam04357" /db_xref="CDD:190952" gene complement(2320002..2321873) /locus_tag="Acear_2203" /db_xref="GeneID:9514262" CDS complement(2320002..2321873) /locus_tag="Acear_2203" /note="InterPro IPR008763; KEGG: hor:Hore_17720 hypothetical protein; PFAM: peptidase S55 SpoIVB; SPTR: B8CZ02 Putative uncharacterized protein; PFAM: SpoIVB peptidase S55" /codon_start=1 /transl_table=11 /product="peptidase S55 SpoIVB" /protein_id="YP_003828754.1" /db_xref="GI:302392934" /db_xref="GeneID:9514262" /translation="MRKYGSLMLVIAFCVLLFTPVMAVDDSGPREILPVNKIETGMSG VGKTVISGTEVEEFNVEVLGVLKKQGVNRDLILIEVSGDVIDKTGGIAAGMSGSPIYI DGKLIGAIGYGWQLTEHKVGMVTPIEDMLDLWQLDEIEEGTTAGLSEPIKINGKSVEQ VSFVEDKSSVKQDNSLTAYPVKTPLLVSGLDKEAVDYLSEELSAYDLKPVQSTAAADM SKGKEDKLVPGSAIAVQLARGDVDISAVGTLTYREGDRVLGFGHQFMGLGDSNYFLSS AYIHHMIKSMKMPFKLGSPLNSKGIITQDRSAGVGGRIGQSPKVVPLEVDVTDRDLNK EQKINAQIIRNEELFQSLASSVIYQAINSTIDRRGGGTAEVEMEIMANNLEEKIIERK NIFYSRRDVASVALRDFSQALMLITQNPFQKINLIDINLDVDIKEKPQVALIRELNVL TDKLEPGKEVELEVTFQPYREEVLVKNYSFTLPEDIESGIASMELVGGLEANFTAEQQ QEAKPEEKKYGYGKNETFRNLEEVITAFKEQKINSDLVVRIYPSYNNHKAVPVNQNND ENRAENKNETGSEGADLEAMGMLAEETFKTDYILEGRVNTEIEVESNSKENNDDTKE" misc_feature complement(2321520..>2321732) /locus_tag="Acear_2203" /note="SpoIVB peptidase S55; Region: Peptidase_S55; pfam05580" /db_xref="CDD:114310" gene complement(2321929..2322291) /locus_tag="Acear_2204" /db_xref="GeneID:9514263" CDS complement(2321929..2322291) /locus_tag="Acear_2204" /note="InterPro IPR019301; KEGG: nth:Nther_2832 rod binding protein-like protein; PFAM: Flagellar protein FlgJ-like; SPTR: B2A3F0 Rod binding protein-like protein; PFAM: Rod binding protein" /codon_start=1 /transl_table=11 /product="Flagellar protein FlgJ" /protein_id="YP_003828755.1" /db_xref="GI:302392935" /db_xref="GeneID:9514263" /translation="MKINSTQRMEMLTERSRLKQNQRKQSEFKEKLSKLQQQSSKDEQ ENKELKKATQKFSSVFVGLMLKEMRKTIPESGYLDGGLKEDIFKDMLDRKYAEEIADS KQLHLTDKLYQQLSQKTE" misc_feature complement(2321950..2322096) /locus_tag="Acear_2204" /note="Rod binding protein; Region: Rod-binding; cl01626" /db_xref="CDD:194178" gene complement(2322308..2323465) /locus_tag="Acear_2205" /db_xref="GeneID:9514264" CDS complement(2322308..2323465) /locus_tag="Acear_2205" /note="COGs: COG1706 Flagellar basal-body P-ring protein; InterPro IPR001782; KEGG: hor:Hore_16540 flagellar P-ring protein; PFAM: flagellar P-ring protein; SPTR: B8CYN5 Flagellar P-ring protein; PFAM: Flagellar P-ring protein" /codon_start=1 /transl_table=11 /product="flagellar P-ring protein" /protein_id="YP_003828756.1" /db_xref="GI:302392936" /db_xref="GeneID:9514264" /translation="MYIKRTFIILAITLSFSLILSLPLLAQEDNTFQDPMVRIKDITR VQGVRSNQLSGYGLVVGLNGTGDGGGSAATVRSIANMLQNFGVNVNPSQVESENIAAV MVTAELPPFGRVGDRIDINVASIGDADSLQGGTLLMTPLLGPNQQQVYALAQGPVSIG GFNTEQGGSSVRKNHATVGQVPDGATIEEGVETDFSDQQQVTFLLDEPDFATAQRIAD VINQRYGYDSEGNNAAQAVDPGRIKVSVPDRMEDRLVSFVAQVNRLSVRPDKKAKVVV NERTGTIVMGHNVRISTVSVAHGNLTVTISSEEEVSQPPPFSEGETETTEETEIEAEE EENRLIVLPKGSSISDVVKALNGVGATPRDTIAILQAIKAQGALHAKLETM" misc_feature complement(2322311..2323357) /locus_tag="Acear_2205" /note="flagellar basal body P-ring protein; Provisional; Region: flgI; PRK05303" /db_xref="CDD:180004" misc_feature complement(2322320..2323357) /locus_tag="Acear_2205" /note="flagellar basal body P-ring protein; Reviewed; Region: flgI; cl14622" /db_xref="CDD:187395" gene complement(2323499..2324086) /locus_tag="Acear_2206" /db_xref="GeneID:9514265" CDS complement(2323499..2324086) /locus_tag="Acear_2206" /note="COGs: COG2063 Flagellar basal body L-ring protein; InterPro IPR000527; KEGG: hor:Hore_16550 flagellar L-ring protein; PFAM: flagellar L-ring protein; SPTR: B8CYN6 Flagellar L-ring protein; PFAM: Flagellar L-ring protein" /codon_start=1 /transl_table=11 /product="flagellar L-ring protein" /protein_id="YP_003828757.1" /db_xref="GI:302392937" /db_xref="GeneID:9514265" /translation="MKHTVVRFFLVIGLISILSLAANPLLAASLYEDSNSPYGEHKAA EAGDILTVMISESSTADQQASTETGQSNEVNVGPGAGELDFVKLFRLNQEDSSSADGS TSQSGSLTAQMTVQVTEVLPNGNLKIEGTKEITVNAEMQKIEVEGIVRPEDITISNTV NSTKIANSKIKYVGEGAIGDRQEPGLLTKVLNVFF" misc_feature complement(2323502..2323987) /locus_tag="Acear_2206" /note="Flagellar L-ring protein; Region: FlgH; cl00905" /db_xref="CDD:186249" gene complement(2324116..2325102) /locus_tag="Acear_2207" /db_xref="GeneID:9514266" CDS complement(2324116..2325102) /locus_tag="Acear_2207" /note="COGs: COG1261 Flagellar basal body P-ring biosynthesis protein; InterPro IPR017585; KEGG: hor:Hore_16560 flagellar basal body P-ring biosynthesis protein; SPTR: B8CYN7 Flagellar basal body P-ring biosynthesis protein; TIGRFAM: flagella basal body P-ring formation protein FlgA; TIGRFAM: flagella basal body P-ring formation protein FlgA" /codon_start=1 /transl_table=11 /product="flagella basal body P-ring formation protein FlgA" /protein_id="YP_003828758.1" /db_xref="GI:302392938" /db_xref="GeneID:9514266" /translation="MVNWRQLSQLRLVLLLLILLLMTSCAAAAQSKIGFKIDHEVKAA GQKLQLGEIAEIEAPKKFKQKMETINLGQSPLPGYTRVLKRDYILSALERAGFNLSRI TYQIPKQIRVTTPHQVLDTDRLTEKVRNYIQQNLSAEAEDIEIELQNLDREVRLPVGG VELQIGNLNTKRILGRTAVPVNIYVDGKLAKKKYIQAQVTAYQRVLVAQESIKRRQSL AENQFKWEKRPLVKLHSQPFTDVDSIQNYRLERSINTGQILTRNLIEIPPLVKRRDRV KIIAVVGRVRVSTAGVALESGTEGEHIKVRNIKSNREIMAKVIGKKTVKVIL" misc_feature complement(2324125..2324751) /locus_tag="Acear_2207" /note="SAF domain; Region: SAF; cl00555" /db_xref="CDD:193866" gene complement(2325119..2325907) /locus_tag="Acear_2208" /db_xref="GeneID:9514267" CDS complement(2325119..2325907) /locus_tag="Acear_2208" /note="COGs: COG4786 Flagellar basal body rod protein; InterProIPR019776:IPR001444:IPR010930:IPR020013:IPR 012834; KEGG: hor:Hore_16570 flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: B8CYN8 Flagellar basal-body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; flagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgG" /protein_id="YP_003828759.1" /db_xref="GI:302392939" /db_xref="GeneID:9514267" /translation="MIRSLWTAATGMKAQQLNIDTISNNLANVNTNGFKKSRVNFQDL MYQSLREAGTPNNQGSQVPAGIEVGHGVRPAATQKLFAQGSFQQTGNPLDMAIEGDGF FQVVRPNGQVGYTRDGSFKRDSNGRIVTSDGYPLASDITIPEDTTDVSITAEGRVMVK QPGNEEVTEVGQIELSRFSNPAGLKSIGRNLFAETPASGGPTVGVPAEDGFGTISQGY LEKGNVKVVEEMTNMIAAQRAYEVNSKAIKASDQMLQQANNLKR" misc_feature complement(2325125..2325907) /locus_tag="Acear_2208" /note="flagellar basal body rod protein FlgG; Provisional; Region: flgG; PRK12693" /db_xref="CDD:183687" misc_feature complement(2325803..2325895) /locus_tag="Acear_2208" /note="Flagella basal body rod protein; Region: Flg_bb_rod; cl15245" /db_xref="CDD:197453" misc_feature complement(2325185..2325490) /locus_tag="Acear_2208" /note="flagellar basal-body rod protein FlgF; Region: flgF; TIGR02490" /db_xref="CDD:188226" gene complement(2326009..2326746) /locus_tag="Acear_2209" /db_xref="GeneID:9514268" CDS complement(2326009..2326746) /locus_tag="Acear_2209" /note="COGs: COG4786 Flagellar basal body rod protein; InterPro IPR001444:IPR010930:IPR020013:IPR012836; KEGG: tte:TTE0172 flagellar basal body and hook proteins; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; SPTR: C6P9W4 Flagellar basal-body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; flagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; flagellar hook-basal body proteins" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgF" /protein_id="YP_003828760.1" /db_xref="GI:302392940" /db_xref="GeneID:9514268" /translation="MLRGLYTAASGMNASLKRTNIITNNLANSTTPGYKKDQTVNKSF SEMLLRRMPDKEVIGTAGLGAKVDETVTDFSAGSVHKTDNPFDWAIEGEGFFAVQTPE GIRYTRSGDFTLNQDGQVVTQNGNFVLGQAGPLEVVGEQVNVDNQNNLVVDGQVVDQV RVVTFAENDGLVKEGDDLYRATPDVGNQFMATGKINQGYLESSNVNVVESMTNMIEAT RHYESNQRVVKAYDQSLDKTVNSVGRL" misc_feature complement(2326018..2326746) /locus_tag="Acear_2209" /note="Flagellar basal body rod protein [Cell motility and secretion]; Region: FlgG; COG4786" /db_xref="CDD:34397" misc_feature complement(2326642..2326734) /locus_tag="Acear_2209" /note="Flagella basal body rod protein; Region: Flg_bb_rod; cl15245" /db_xref="CDD:197453" misc_feature complement(2326081..>2326257) /locus_tag="Acear_2209" /note="flagellar basal-body rod protein FlgF; Region: flgF; TIGR02490" /db_xref="CDD:188226" gene complement(2326842..2327102) /locus_tag="Acear_2210" /db_xref="GeneID:9514269" CDS complement(2326842..2327102) /locus_tag="Acear_2210" /note="InterPro IPR014208; KEGG: hor:Hore_17740 sporulation stage III transcriptional regulator SpoIIID; SPTR: B8CZ04 sporulation stage III transcriptional regulator SpoIIID; TIGRFAM: sporulation transcriptional regulator SpoIIID; PFAM: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID" /codon_start=1 /transl_table=11 /product="sporulation transcriptional regulator SpoIIID" /protein_id="YP_003828761.1" /db_xref="GI:302392941" /db_xref="GeneID:9514269" /translation="MKDYIYQRVLEVSNYIYETRATVRQAAKVFGVSKSTIHKDATER LQKIDKRLAEKVKKVLEYNKAERHIRGGQATKEKYLSEKNND" misc_feature complement(2326854..2327099) /locus_tag="Acear_2210" /note="Stage III sporulation protein D; Region: SpoIIID; cl11824" /db_xref="CDD:159633" gene complement(2327239..2328147) /locus_tag="Acear_2211" /db_xref="GeneID:9514270" CDS complement(2327239..2328147) /locus_tag="Acear_2211" /note="COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR011055; KEGG: hor:Hore_17750 peptidase M23B; PFAM: peptidase M23; SPTR: B8CZ05 peptidase M23B; PFAM: peptidase family M23" /codon_start=1 /transl_table=11 /product="peptidase M23" /protein_id="YP_003828762.1" /db_xref="GI:302392942" /db_xref="GeneID:9514270" /translation="MSDDINNEEKGKKDNQTDNQREKNRFPFSIKKDKEDIKLKLKES IDKLADKFSWKQFITRLVTNKKFLVGLAVVILAGIILIPQLNDLTSQSEPPASEADRS QDEVVTYEHIPADQEIKGDEQKQPTIAEEKQESDLKTEVEANKEESEKENREELSEEK AESEPVVQQANIKPKFNLPVKGAEVSRSYGWSKHPMLEDWRYHQGVDLQTAQGTPIRA ATAGKIAKIKEDDYLGLVLIIEHKSGHQTIYGHAQEFNLKEGQQVNRGQTIGKVGTSG LVMEPTLHFGIIKDGESVDPTEHLNL" misc_feature complement(2327260..2327547) /locus_tag="Acear_2211" /note="Peptidase family M23; Region: Peptidase_M23; pfam01551" /db_xref="CDD:190031" gene complement(2328223..2329110) /locus_tag="Acear_2212" /db_xref="GeneID:9514271" CDS complement(2328223..2329110) /locus_tag="Acear_2212" /note="COGs: COG2385 sporulation protein and related protein; InterPro IPR000408:IPR013693:IPR014225:IPR013486; KEGG: amt:Amet_0359 sporulation stage II protein D; PFAM: Stage II sporulation D domain protein; SPTR: A1HRD8 SpoIID/LytB domain; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; stage II sporulation protein D" /codon_start=1 /transl_table=11 /product="stage II sporulation protein D" /protein_id="YP_003828763.1" /db_xref="GI:302392943" /db_xref="GeneID:9514271" /translation="MNLFLILLLPTGVVIGSRLMPDFESEKITVKLTMENGRIIELEL EEYIKGVVAAEMPAEFELEALKAQAVAARSYILSRLQGTEKKEVAITTDINMDQAWIS KEELLKEWGNLEYWFKISEAVESTKGIFLTYNGKIVTAVYHSASGSITAAARNVWGRK VPYLQPVSSNYEEQSPYNHFVQKYSFREFARKVDSGISSVNDIDILARSPSRRVLKLQ VGSQIMTGRELRKRLGLKSTNFRYQIKDNYIKFITTGNGHGVGMSQYGAHGMAKEGYN YLEILKHYYSGVSVKKLNH" misc_feature complement(2328232..2329098) /locus_tag="Acear_2212" /note="Stage II sporulation protein; Region: SpoIID; cl07201" /db_xref="CDD:164094" misc_feature complement(2328235..2328999) /locus_tag="Acear_2212" /note="SpoIID/LytB domain; Region: SpoIID_LytB; TIGR02669" /db_xref="CDD:162968" gene complement(2329181..2330446) /locus_tag="Acear_2213" /db_xref="GeneID:9514272" CDS complement(2329181..2330446) /locus_tag="Acear_2213" /EC_number="2.5.1.7" /note="COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; InterPro IPR001986:IPR013792:IPR005750; KEGG: hor:Hore_17770 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); SPTR: B8CZ07 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /protein_id="YP_003828764.1" /db_xref="GI:302392944" /db_xref="GeneID:9514272" /translation="MRRLIAEATDYLEGNISVSGAKNAALPIITAALLGEGGSKLSRI PDLKDVNNLINILSNLGAEVNFTDSELELNTDGIDKYSTDSDLARKMRASYYTLGALL GRYGQACTVLPGGCEIGDRPIDLHLKGFSALGADVELDHGLVKLEADRLKGTEIYLDY PSVGATINIMLAAVLADGETVIENVAREPEIIDLANYLNIMGAEITGAGTDIIKITGV NSLNGTDYTIIPDRIEAGTYMMTVAAVGGDVVIKNVLVEHVRPLIAKLKEMGVEIIEG IDQVRVKSEGCLSGTDIKTMPYPGFPTDMQAQFMALLTQATQENLVIETVFERRFGHV DELRRMGAQIKVDGRSAVVARTDLEGAQVKATDLRAGAALIIAGLTAGGQTEIQNIYH IERGYEDITDKLKGIGANIELVEEYNCLS" misc_feature complement(2329205..2330413) /locus_tag="Acear_2213" /note="UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated; Region: PRK09369" /db_xref="CDD:181804" misc_feature complement(2329226..2330413) /locus_tag="Acear_2213" /note="UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall. The reaction is phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine =...; Region: UdpNAET; cd01555" /db_xref="CDD:30128" misc_feature complement(order(2329754..2329765,2330384..2330395)) /locus_tag="Acear_2213" /note="hinge; other site" /db_xref="CDD:30128" misc_feature complement(order(2329535..2329537,2329955..2329960, 2329967..2329969,2330069..2330086,2330159..2330161, 2330171..2330173,2330378..2330380)) /locus_tag="Acear_2213" /note="active site" /db_xref="CDD:30128" gene complement(2330542..2331132) /locus_tag="Acear_2214" /db_xref="GeneID:9514273" CDS complement(2330542..2331132) /locus_tag="Acear_2214" /note="COGs: COG5506 conserved hypothetical protein; InterPro IPR012543; KEGG: hor:Hore_17780 hypothetical protein; PFAM: protein of unknown function DUF1694; SPTR: B8CZ08 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1694)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828765.1" /db_xref="GI:302392945" /db_xref="GeneID:9514273" /translation="MGPKDEEIQKEAISNQDKNELEQTVSAGIHGGFELKKGEKRRFL GEFKERVIKALTFGQIIEPGVYPEILEAIKDLEAEKLIINRQIDMQAAKEYIDLAREN GLSFKKVESDDFKGDIGLVVVSDKAVNNDEIRVPDKKEKFKELNLPLELLDKAGEKIC TECYEEIADKAPEELINFKKMGWIDKLFGTSCFCKE" misc_feature complement(2330728..2331081) /locus_tag="Acear_2214" /note="Protein of unknown function (DUF1694); Region: DUF1694; cl02318" /db_xref="CDD:154853" gene complement(2331215..2331622) /locus_tag="Acear_2215" /db_xref="GeneID:9514274" CDS complement(2331215..2331622) /locus_tag="Acear_2215" /note="COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR020546:IPR020547:IPR001469; KEGG: hor:Hore_17790 ATP synthase F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; SPTR: B8CZ09 ATP synthase epsilon chain; TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria)" /codon_start=1 /transl_table=11 /product="ATP synthase F1 subunit epsilon" /protein_id="YP_003828766.1" /db_xref="GI:302392946" /db_xref="GeneID:9514274" /translation="MANTVQVDILTSERTVYSDEVEMVIVPTIDGNLGFLPNHSPLIT GLQIGQIRIKKDGEEIELATSGGFIEVKPDQINILADTAEFPEEIDIERAKRAKKRAK ERLQKSDEARINETRAESALQRAINRIDVVQGE" misc_feature complement(2331221..2331619) /locus_tag="Acear_2215" /note="F0F1 ATP synthase subunit epsilon; Validated; Region: atpC; PRK00571" /db_xref="CDD:179070" misc_feature complement(2331374..2331607) /locus_tag="Acear_2215" /note="ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Region: ATP-synt_DE_N; cl10033" /db_xref="CDD:195951" gene complement(2331624..2333045) /locus_tag="Acear_2216" /db_xref="GeneID:9514275" CDS complement(2331624..2333045) /locus_tag="Acear_2216" /EC_number="3.6.3.14" /note="COGs: COG0055 F0F1-type ATP synthase beta subunit; InterProIPR020003:IPR003593:IPR004100:IPR000194:IPR 000793:IPR018118:IPR005722; KEGG: hor:Hore_17800 ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; PRIAM: H(+)-transporting two-sector ATPase; SMART: AAA ATPase; SPTR: B8CZ10 ATP synthase F1, beta subunit; TIGRFAM: ATP synthase F1, beta subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit" /codon_start=1 /transl_table=11 /product="ATP synthase F1 subunit beta" /protein_id="YP_003828767.1" /db_xref="GI:302392947" /db_xref="GeneID:9514275" /translation="MSGNKEQNIGQVVEVIGPVVEFEFSADDLPDIYDAVEVKDEERD IDVTVEILHQVGDSRVKGVAMSSTDGLVRGMEAVNTGAPISVPVGKDCLGRIFNVLGD TIDQQGEVDADDYRPIHQDPPEFEEQSTSTEIFETGIKVVDLLAPYVSGGKVGLFGGA GVGKTVLIMELINRIATEHGGFSVFSGVGERTREGNDLWLEMKESGVLDKVALVYGQM NEPPGARMRVGLTGLTMAEHFRDEFGSDVLMFIDNIFRFIQAGSEVSALLGRMPSAVG YQPTLATDVGALQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRS LTEKGIYPAVDPLDSTSTILDPGIIGERHYNVAREVQETLQRYQDLQDIIAILGMDEL SPEDKLTVNRARKIERFLSQPFFVAEQFTGIPGEYVPLSETIKGFEEILDGKHDDIPE EAFYMAGGIEDVLEKAKELEGSE" misc_feature complement(2331636..2333027) /locus_tag="Acear_2216" /note="F0F1 ATP synthase subunit beta; Validated; Region: PRK09280" /db_xref="CDD:181752" misc_feature complement(2332803..2333012) /locus_tag="Acear_2216" /note="ATP synthase alpha/beta family, beta-barrel domain; Region: ATP-synt_ab_N; pfam02874" /db_xref="CDD:145823" misc_feature complement(2331978..2332799) /locus_tag="Acear_2216" /note="F1 ATP synthase beta subunit, nucleotide-binding domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a...; Region: F1-ATPase_beta; cd01133" /db_xref="CDD:29999" misc_feature complement(order(2331990..2331992,2331996..2331998, 2332002..2332007,2332032..2332037,2332068..2332076, 2332080..2332082,2332101..2332103,2332113..2332118, 2332125..2332127,2332176..2332178,2332197..2332199, 2332209..2332211,2332224..2332229,2332233..2332241, 2332257..2332259,2332269..2332271,2332278..2332280, 2332371..2332373,2332386..2332394,2332458..2332460, 2332467..2332475,2332656..2332658,2332662..2332664, 2332668..2332673,2332677..2332679,2332728..2332730)) /locus_tag="Acear_2216" /note="alpha subunit interaction interface [polypeptide binding]; other site" /db_xref="CDD:29999" misc_feature complement(2332551..2332571) /locus_tag="Acear_2216" /note="Walker A motif; other site" /db_xref="CDD:29999" misc_feature complement(order(2332023..2332028,2332278..2332280, 2332290..2332292,2332464..2332466,2332473..2332478, 2332548..2332556,2332563..2332565)) /locus_tag="Acear_2216" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29999" misc_feature complement(2332290..2332304) /locus_tag="Acear_2216" /note="Walker B motif; other site" /db_xref="CDD:29999" misc_feature complement(order(2332005..2332010,2332026..2332028, 2332032..2332034)) /locus_tag="Acear_2216" /note="inhibitor binding site; inhibition site" /db_xref="CDD:29999" misc_feature complement(2331633..2331956) /locus_tag="Acear_2216" /note="ATP synthase alpha/beta chain, C terminal domain; Region: ATP-synt_ab_C; pfam00306" /db_xref="CDD:144044" gene complement(2333076..2333948) /locus_tag="Acear_2217" /db_xref="GeneID:9514276" CDS complement(2333076..2333948) /locus_tag="Acear_2217" /note="COGs: COG0224 F0F1-type ATP synthase gamma subunit; InterPro IPR000131; KEGG: hor:Hore_17810 ATP synthase F1 subunit gamma; PFAM: H+transporting two-sector ATPase gamma subunit; SPTR: B8CZ11 ATP synthase gamma chain; TIGRFAM: ATP synthase F1 subunit gamma; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit" /codon_start=1 /transl_table=11 /product="ATP synthase F1 subunit gamma" /protein_id="YP_003828768.1" /db_xref="GI:302392948" /db_xref="GeneID:9514276" /translation="MATMREIQRRINSVENTKKITRAMNMVASAKLQRAQESATAAKP FFEKTRQTLLGAFRRIREDVHPLLEKRDQMNRIGYIVITADRGLCGPYNTNVTRKVDE EVEDKSEVGMIAVGRNGRNHFKRNDLEIFSEYLDLEDKPSIGLAQNISNEASELYQDE VFDEVHLIYTQFNSVLSHEVKKLQLLPVEPQKIEDKDEEEGEELNAGYLYEPSPGEVL DVILPKYLRNLIYGSLLEAKASEFAARMTAMDSATENAKEMIEDLTRSFNRARQAEIT QEITEIAAGAEALD" misc_feature complement(2333082..2333948) /locus_tag="Acear_2217" /note="ATP synthase; Region: ATP-synt; cl00365" /db_xref="CDD:193790" gene complement(2334021..2335550) /locus_tag="Acear_2218" /db_xref="GeneID:9514277" CDS complement(2334021..2335550) /locus_tag="Acear_2218" /EC_number="3.6.3.14" /note="COGs: COG0056 F0F1-type ATP synthase alpha subunit; InterProIPR020003:IPR004100:IPR000194:IPR000793:IPR 018118:IPR005294; KEGG: hor:Hore_17820 ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; PRIAM: H(+)-transporting two-sector ATPase; SPTR: B8CZ12 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit" /codon_start=1 /transl_table=11 /product="ATP synthase F1 subunit alpha" /protein_id="YP_003828769.1" /db_xref="GI:302392949" /db_xref="GeneID:9514277" /translation="MNLKPDEISSIIKKRIEDYDVKLETEDVGTVLSVGDGIAQIHGL EEAMAGELLQFASGVYGMVLNLEEDSIGCVILGDETKIEEGDRVERTGELVDVPVGED MIGRVVNALGEPIDGKGPINTDKKRSIESEAPNVIERTPVEVPLQTGLKAVDSLVPIG RGQRELIIGDRQTGKTSIGIDTIINQKDNDVICIYVAIGQKASTVAQVVDRLENNQAM DHTIIVAANASDPAPLQYIAPYAGCAMGEEFMYDGKDVLVVYDDLSKHAVAYREMSLL LRRPPGREAYPGDVFYLHSRLLERAAKLNDDMGGGSLTALPIIETQAGDVSAYIPTNV ISITDGQIYLESELFHSGVRPAINVGISVSRVGGDAQVSAMKDVAGTLRLDLSQYREL EAFAQFGSDLDEATQQKLARGDRIIEVLKQPENNPMEVENQVLSIYAVTNGYMDDIPV DDIKEFEEEMIDFIHSNYAEVPETIKETEELDDEIEEELIAAIEDFKAMFVDEIEKES A" misc_feature complement(2334138..2335550) /locus_tag="Acear_2218" /note="F0F1 ATP synthase subunit alpha; Validated; Region: PRK09281" /db_xref="CDD:181753" misc_feature complement(2335275..2335478) /locus_tag="Acear_2218" /note="ATP synthase alpha/beta family, beta-barrel domain; Region: ATP-synt_ab_N; pfam02874" /db_xref="CDD:145823" misc_feature complement(2334450..2335271) /locus_tag="Acear_2218" /note="F1 ATP synthase alpha, central domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to...; Region: F1_ATPase_alpha; cd01132" /db_xref="CDD:29998" misc_feature complement(order(2334456..2334458,2334489..2334491, 2334498..2334503,2334534..2334536,2334543..2334545, 2334654..2334656,2334666..2334668,2334675..2334677, 2334687..2334689,2334702..2334707,2334711..2334719, 2334735..2334740,2334921..2334923,2334930..2334935, 2334939..2334950,2335035..2335040,2335128..2335130, 2335134..2335136,2335143..2335148,2335152..2335157, 2335203..2335208)) /locus_tag="Acear_2218" /note="beta subunit interaction interface [polypeptide binding]; other site" /db_xref="CDD:29998" misc_feature complement(2335023..2335046) /locus_tag="Acear_2218" /note="Walker A motif; other site" /db_xref="CDD:29998" misc_feature complement(order(2334456..2334458,2334486..2334491, 2334504..2334506,2334543..2334545,2334591..2334593, 2334756..2334758,2334765..2334770,2334951..2334953, 2334966..2334968,2335020..2335028,2335038..2335040)) /locus_tag="Acear_2218" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29998" misc_feature complement(2334768..2334782) /locus_tag="Acear_2218" /note="Walker B motif; other site" /db_xref="CDD:29998" misc_feature complement(2334156..2334425) /locus_tag="Acear_2218" /note="ATP synthase alpha/beta chain, C terminal domain; Region: ATP-synt_ab_C; pfam00306" /db_xref="CDD:144044" gene complement(2335561..2336109) /locus_tag="Acear_2219" /db_xref="GeneID:9514278" CDS complement(2335561..2336109) /locus_tag="Acear_2219" /note="COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); InterPro IPR020781:IPR000711; KEGG: hor:Hore_17830 ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; SPTR: B8CZ13 ATP synthase subunit delta; TIGRFAM: ATP synthase F1 subunit delta; PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit" /codon_start=1 /transl_table=11 /product="ATP synthase F1 subunit delta" /protein_id="YP_003828770.1" /db_xref="GI:302392950" /db_xref="GeneID:9514278" /translation="MRKSEIAKRYSQALFELAKENEKLEEILNEFEKFITLLKQSDEL RKIITHVEITYEQKKDILTEIFAEELSINLFNFIKLLIDKNRANLLETIYQQFKDSVN DELNKLEVEVRSPIELTTQQKKKLKEKLGKALEKNIELQIEINQDLIGGLVLKIGNKV IDGSLTTEIENLSRDLRKLQVS" misc_feature complement(2335576..2336109) /locus_tag="Acear_2219" /note="ATP synthase B/B' CF(0); Region: ATP-synt_B; cl07975" /db_xref="CDD:195650" misc_feature complement(2335582..2336094) /locus_tag="Acear_2219" /note="ATP synthase delta (OSCP) subunit; Region: OSCP; pfam00213" /db_xref="CDD:189453" gene complement(2336106..2336609) /locus_tag="Acear_2220" /db_xref="GeneID:9514279" CDS complement(2336106..2336609) /locus_tag="Acear_2220" /note="COGs: COG0711 F0F1-type ATP synthase subunit b; InterPro IPR002146:IPR005864; KEGG: hor:Hore_17840 ATP synthase F0 subunit B; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: B8CZ14 ATP synthase B chain; TIGRFAM: ATP synthase F0 subunit B; PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b" /codon_start=1 /transl_table=11 /product="ATP synthase F0 subunit B" /protein_id="YP_003828771.1" /db_xref="GI:302392951" /db_xref="GeneID:9514279" /translation="MISLDVTFFFQVINFIALFLILRHFLFEPITNFMNQRSEDISDQ IEEAEKKEAKAEELKSKYKQELKEAKQKAQEIIEEGRRRGQRKKNDIINEAKEEASRQ IQKAEDEIERAKQKAREKLKDEALDLSVDMTKKVVDQMIDKELQEQTINNYLENLDED KLGDQVQ" misc_feature complement(2336130..2336609) /locus_tag="Acear_2220" /note="F0F1-type ATP synthase, subunit b [Energy production and conversion]; Region: AtpF; COG0711" /db_xref="CDD:31055" misc_feature complement(2336145..2336594) /locus_tag="Acear_2220" /note="ATP synthase B/B' CF(0); Region: ATP-synt_B; cl07975" /db_xref="CDD:195650" gene complement(2336730..2336990) /locus_tag="Acear_2221" /db_xref="GeneID:9514280" CDS complement(2336730..2336990) /locus_tag="Acear_2221" /note="InterPro IPR000454:IPR002379:IPR005953; KEGG: nth:Nther_2849 F0F1 ATP synthase subunit C; PFAM: H+transporting two-sector ATPase C subunit; SPTR: B2A3G7 ATP synthase subunit c; TIGRFAM: ATP synthase F0 subunit C; PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c" /codon_start=1 /transl_table=11 /product="ATP synthase F0 subcomplex C subunit" /protein_id="YP_003828772.1" /db_xref="GI:302392952" /db_xref="GeneID:9514280" /translation="MSDQALVLAASAIGAGLAMIAGIGAGIGQGFAAGKGAEAVGKQP DAQGLIVRTMLLGAAVAETTGIYGLVVALILLFANPLLGLLG" misc_feature complement(2336775..>2336879) /locus_tag="Acear_2221" /note="ATP synthase subunit C; Region: ATP-synt_C; cl00466" /db_xref="CDD:193830" gene complement(2337008..2337565) /locus_tag="Acear_2222" /db_xref="GeneID:9514281" CDS complement(2337008..2337565) /locus_tag="Acear_2222" /note="InterPro IPR000454:IPR002379:IPR005953; KEGG: nth:Nther_2850 ATP synthase F0 subunit C; PFAM: H+transporting two-sector ATPase C subunit; SPTR: B2A3G8 ATP synthase F0 subunit C; TIGRFAM: ATP synthase F0 subunit C; PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c" /codon_start=1 /transl_table=11 /product="ATP synthase F0 subunit C" /protein_id="YP_003828773.1" /db_xref="GI:302392953" /db_xref="GeneID:9514281" /translation="MESLVNIITFMLEWLQQFSATALVLAASAIAAGLAMIAGIGPGV GQGFAAGKGAEAVGDYKENNNNITFVMLLGAAVAETSGIFSLVVALIVLYANPLVGVE GTGIVLAASVLGAGLAMIAGVGPGIGQGYAAGKGTERVGQRPKYQGLVVKVMLLGQAV GQTTGIYALVVALILLFANPLLNLL" misc_feature complement(2337278..>2337442) /locus_tag="Acear_2222" /note="ATP synthase subunit C; Region: ATP-synt_C; cl00466" /db_xref="CDD:193830" misc_feature complement(2337053..>2337211) /locus_tag="Acear_2222" /note="ATP synthase subunit C; Region: ATP-synt_C; cl00466" /db_xref="CDD:193830" gene complement(2337594..2338352) /locus_tag="Acear_2223" /db_xref="GeneID:9514282" CDS complement(2337594..2338352) /locus_tag="Acear_2223" /note="COGs: COG0356 F0F1-type ATP synthase subunit a; InterPro IPR000568; KEGG: nth:Nther_2851 ATP synthase F0 subunit A; PFAM: H+transporting two-sector ATPase A subunit; SPTR: Q0ZS25 ATP synthase subunit a; TIGRFAM: ATP synthase F0 subunit A; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)" /codon_start=1 /transl_table=11 /product="ATP synthase F0 subunit A" /protein_id="YP_003828774.1" /db_xref="GI:302392954" /db_xref="GeneID:9514282" /translation="MSFFQRFIERMFLNPVNSDAFAPEVMFKIPNTALTRMLHIANAP VKSSVTTTWVIIIALTIFSWLATRNLKEQPKTASLQNVAETFVESMRGLVGTTMGPEM KKFTPYIGTLMIYLTIANLVGIIPGKDLFHLYTPTADLNTTAALGAITFVNIHFFGIK SKGITSYFKGYFEPLPFMFPLNVIGSLADPVSLSFRLFGNMIGSVVIMGLLYSVMAVI IPGIASIYFDVFAGVLQAFIFTMLTMTYISMEME" misc_feature complement(2337597..2338214) /locus_tag="Acear_2223" /note="ATP synthase A chain; Region: ATP-synt_A; cl00413" /db_xref="CDD:185980" gene complement(2338384..2338761) /locus_tag="Acear_2224" /db_xref="GeneID:9514283" CDS complement(2338384..2338761) /locus_tag="Acear_2224" /note="InterPro IPR008413; KEGG: amt:Amet_0345 hypothetical protein; PFAM: ATP synthase I; SPTR: A6TK57 Putative uncharacterized protein; PFAM: ATP synthase I chain" /codon_start=1 /transl_table=11 /product="ATP synthase I" /protein_id="YP_003828775.1" /db_xref="GI:302392955" /db_xref="GeneID:9514283" /translation="MQLVKATKVFVIKWVLIIDLILLVLMAAFFDMRSAYGLIVGSVM SIINFHLLALSLTKAVKYKPINAGAYVFINYILRYILWFAVFYIALKRPDVNLLTTVL GMLTVKIVITIINIFNWWPEEQQ" gene complement(2338830..2339048) /locus_tag="Acear_2225" /db_xref="GeneID:9514284" CDS complement(2338830..2339048) /locus_tag="Acear_2225" /note="KEGG: aoe:Clos_2568 hypothetical protein; SPTR: A8MJW7 Putative uncharacterized protein; PFAM: Putative F0F1-ATPase subunit (ATPase_gene1)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828776.1" /db_xref="GI:302392956" /db_xref="GeneID:9514284" /translation="MKENFKILQALALLSQIGIVIIIPVFFGVWCGNKLDKWFGTGWV FLILGVILGVLSGMWTSYKLIISQQSSD" gene complement(2339314..2340450) /locus_tag="Acear_2226" /db_xref="GeneID:9514285" CDS complement(2339314..2340450) /locus_tag="Acear_2226" /EC_number="5.1.3.14" /note="COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: hmo:HM1_1094 udp-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: B0TI60 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase" /codon_start=1 /transl_table=11 /product="UDP-N-Acetylglucosamine 2-epimerase" /protein_id="YP_003828777.1" /db_xref="GI:302392957" /db_xref="GeneID:9514285" /translation="MVEEIKKVAIIFGTRPEAIKMAPVVKELKQSQNLNPVVITTAQH RELLDQVLELFQLEVDYDLDIMKPKQNLSQITIKILQQLKPLFEQEEPDLVLVHGDTT TTFTSSLAAFYAQIPIGHVEAGLRTYEKYDPFPEEMNRRLCGVLTEMHFAPTEQAKNN LLQEGIDESQVFITGNTIVDALLEIYEKDYRFSKGVINDLDLLKEKLILVTTHRRENL GQPLVNICRAIKELVVSYPQAEVVFPVHPNPKISKIVKNVLSDVPNVHLIEPLNYKEF INLMVRADIILTDSGGIQEEASSLGKPTLLLRETTERPEAIVSGSVQLVGTNKTRIVK AGLNLLHEQPITSSSSVVTDLYGDGQAAVRIRELLITYFNNINK" misc_feature complement(2339332..2340432) /locus_tag="Acear_2226" /note="UDP-N-acetylglucosamine 2-epimerase; Region: wecB; TIGR00236" /db_xref="CDD:188036" misc_feature complement(2339344..2340432) /locus_tag="Acear_2226" /note="Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues...; Region: GT1_UDP-GlcNAc_2-Epimerase; cd03786" /db_xref="CDD:99962" misc_feature complement(order(2339563..2339565,2339575..2339577, 2339623..2339625,2339632..2339634,2339638..2339640, 2340406..2340408)) /locus_tag="Acear_2226" /note="active site" /db_xref="CDD:99962" misc_feature complement(order(2339962..2339964,2340037..2340039, 2340049..2340051,2340100..2340102,2340106..2340108, 2340112..2340117,2340199..2340201,2340220..2340225, 2340229..2340231)) /locus_tag="Acear_2226" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99962" gene complement(2340559..2341605) /locus_tag="Acear_2227" /db_xref="GeneID:9514286" CDS complement(2340559..2341605) /locus_tag="Acear_2227" /note="COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018480:IPR018481; KEGG: hor:Hore_17910 glycosyl transferase family 4; PFAM: glycosyl transferase, family 4, conserved region; SPTR: B8CZ21 glycosyl transferase family 4; PFAM: glycosyl transferase family 4" /codon_start=1 /transl_table=11 /product="glycosyl transferase, family 4, conserved region" /protein_id="YP_003828778.1" /db_xref="GI:302392958" /db_xref="GeneID:9514286" /translation="MESYILCFLIAVILTYVSTPVAGRIARQVGAVDYPNTRRVNQHP VVNLGGLAIYVGVIAAVLFTAGINSKLLGIIISSTLMLVIGLIDDLRGLSPTSKFIWQ IIAALLVTSFGIKIEFITNPLGGVFYLGALSIPFTVFWLVAITNTVNLIDGLDGLAAG VSTIAAVTLLVVAIQEAELLVIILTIAVAGACIGFLQYNFNPAQIFMGDTGSLFLGFL LAAISALGALKSAAAATLVVPILALGVPIFDTAFAIIRRRQKGEPLFQADRGHLHHRL LELGLSHKETVIVVYLISLSLGLVAIAVNGVSELQAFGVLAILAVILFYGSYKLGVIE LNLDSREENYKSIN" misc_feature complement(2340685..2341599) /locus_tag="Acear_2227" /note="UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [Cell envelope biogenesis, outer membrane]; Region: Rfe; COG0472" /db_xref="CDD:30820" misc_feature complement(2340802..2341494) /locus_tag="Acear_2227" /note="This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond...; Region: GT_WecA_like; cd06853" /db_xref="CDD:133463" misc_feature complement(2341339..2341344) /locus_tag="Acear_2227" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:133463" misc_feature complement(2340979..2340990) /locus_tag="Acear_2227" /note="putative catalytic motif [active]" /db_xref="CDD:133463" gene complement(2341683..2342162) /locus_tag="Acear_2228" /db_xref="GeneID:9514287" CDS complement(2341683..2342162) /locus_tag="Acear_2228" /note="COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR016192:IPR016473:IPR002125:IPR016193; KEGG: aoe:Clos_2571 CMP/dCMP deaminase zinc-binding; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: A8MJX0 CMP/dCMP deaminase zinc-binding; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region" /codon_start=1 /transl_table=11 /product="CMP/dCMP deaminase zinc-binding protein" /protein_id="YP_003828779.1" /db_xref="GI:302392959" /db_xref="GeneID:9514287" /translation="MELNSIEEPEVDDRPSWDQYFMELTSVVAKRSTCLRRKVGALLV KEGRVLATGYNGAPSGLKHCSETGCIREERNIPSGQRHELCRGLHAEQNAIIQAALHG TSIDGATLYCTHQPCVVCAKMIINAGIDEIIIGGSYPDELSASMLEEAGVGVKRFNK" misc_feature complement(2341725..2342111) /locus_tag="Acear_2228" /note="Deoxycytidylate deaminase domain. Deoxycytidylate deaminase catalyzes the deamination of dCMP to dUMP, providing the nucleotide substrate for thymidylate synthase. The enzyme binds Zn++, which is required for catalytic activity. The activity of the...; Region: deoxycytidylate_deaminase; cd01286" /db_xref="CDD:29829" misc_feature complement(order(2341803..2341805,2341812..2341817, 2341890..2341892,2341896..2341898,2341995..2341997)) /locus_tag="Acear_2228" /note="catalytic motif [active]" /db_xref="CDD:29829" misc_feature complement(order(2341803..2341805,2341812..2341814, 2341890..2341892,2341896..2341898)) /locus_tag="Acear_2228" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:29829" gene complement(2342149..2342778) /locus_tag="Acear_2229" /db_xref="GeneID:9514288" CDS complement(2342149..2342778) /locus_tag="Acear_2229" /EC_number="2.4.2.9" /note="COGs: COG0035 uracil phosphoribosyltransferase; InterPro IPR000836:IPR005765; KEGG: hor:Hore_17920 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: uracil phosphoribosyltransferase; SPTR: B8CZ22 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="uracil phosphoribosyltransferase" /protein_id="YP_003828780.1" /db_xref="GI:302392960" /db_xref="GeneID:9514288" /translation="MSEVHVIEHPLIQHKLTHIRDKSTGSKMFRELVEEVSTLLAYEV TRDLPLCDVEVETPVTKTESQVIAGKKLGIVPILRAGLGMVDGILKLIPAAKVGHVGL YRDPDTLEPVEYYCKMPADIENRELLVVDPMLATGGSAEAGIQFVKDRGGKNIKFVCL IAAPEGVERLQEAHPDVDIYTPAIDEKLNDHAYIVPGLGDAGDRLYGTK" misc_feature complement(2342152..2342778) /locus_tag="Acear_2229" /note="Phosphoribosyl transferase domain; Region: Pribosyltran; cl00309" /db_xref="CDD:193761" gene complement(2342798..2344051) /locus_tag="Acear_2230" /db_xref="GeneID:9514289" CDS complement(2342798..2344051) /locus_tag="Acear_2230" /EC_number="2.1.2.1" /note="COGs: COG0112 glycine/serine hydroxymethyltransferase; InterPro IPR019798:IPR001085:IPR015424:IPR015421; KEGG: eat:EAT1b_1325 glycine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; PRIAM: glycine hydroxymethyltransferase; SPTR: C4KYT9 serine hydroxymethyltransferase; PFAM: serine hydroxymethyltransferase" /codon_start=1 /transl_table=11 /product="serine hydroxymethyltransferase" /protein_id="YP_003828781.1" /db_xref="GI:302392961" /db_xref="GeneID:9514289" /translation="MNENNVKQLEEIDSEIAEVVAKEEERQKGTIELIASENFVSEAV LAAMGTVLTNKYAEGYPDARYYGGCGVIDEAEKLAISRAKELFGADHANVQPHSGSQA NAAVYFAVLEHGDTVLGMDLTHGGHLTHGSKVNFSGKQFNFVSYGVNKETERIDYDQL LELAKEHQPKLIVAGASAYPREIDFAKFREVADEVGAYLMVDMAHIAGLIAADLHSNP VEYAEFVTTTTHKTLRGPRAGMILCQEEFASQIDKAIFPGIQGGPLMHIIAAKAVAFK EALRPEFNDYQQQIIDNAQALAEEIKSGGYKLVSNGTDNHLLLVNLTDKEITGLAAEE ALDEVGITVNKNTVPFEERSPKVTSGIRIGTPAVTTRGMEEEEMKRIGSLIVKVLNNI DDEEIKAEVKEEVKELTAKFPLHQK" misc_feature complement(2342879..2344024) /locus_tag="Acear_2230" /note="Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of...; Region: SHMT; cd00378" /db_xref="CDD:99733" misc_feature complement(order(2343206..2343208,2343260..2343262, 2343632..2343637,2343740..2343742,2343761..2343763, 2343806..2343808,2343830..2343835,2343887..2343889, 2343941..2343943,2343956..2343958,2343983..2343988, 2344007..2344009,2344013..2344015)) /locus_tag="Acear_2230" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99733" misc_feature complement(order(2342966..2342968,2343341..2343343, 2343359..2343364,2343437..2343439,2343446..2343448, 2343521..2343523,2343671..2343673,2343752..2343757, 2343854..2343856,2343884..2343886,2343944..2343946)) /locus_tag="Acear_2230" /note="glycine-pyridoxal phosphate binding site [chemical binding]; other site" /db_xref="CDD:99733" misc_feature complement(order(2342966..2342968,2343359..2343361, 2343671..2343673,2343944..2343946)) /locus_tag="Acear_2230" /note="active site" /db_xref="CDD:99733" misc_feature complement(order(2343014..2343016,2343284..2343286, 2343668..2343670,2343674..2343676,2343686..2343688, 2343857..2343859,2343878..2343880)) /locus_tag="Acear_2230" /note="folate binding site [chemical binding]; other site" /db_xref="CDD:99733" gene complement(2344076..2344510) /locus_tag="Acear_2231" /db_xref="GeneID:9514290" CDS complement(2344076..2344510) /locus_tag="Acear_2231" /EC_number="5.3.1.6" /note="COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: esi:Exig_2695 RpiB/LacA/LacB family sugar-phosphate isomerase; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: B1YEH5 Sugar-phosphate isomerase, RpiB/LacA/LacB family; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family" /codon_start=1 /transl_table=11 /product="ribose-5-phosphate isomerase" /protein_id="YP_003828782.1" /db_xref="GI:302392962" /db_xref="GeneID:9514290" /translation="MKVALGSDHGGYELKEEVKRYLEEARIDYKDFGAYSTDSVDYPD IAIPVAEAVSEGKYERGILICGTGIGMSITANKFKGVRAALCHDIFSAKATREHNDSN LLTMGDRVIGKQLALEIVKVWLDTEFHGGRHARRINKIKEIE" misc_feature complement(2344079..2344510) /locus_tag="Acear_2231" /note="Ribose/Galactose Isomerase; Region: LacAB_rpiB; cl00485" /db_xref="CDD:193839" gene complement(2344530..2345210) /locus_tag="Acear_2232" /db_xref="GeneID:9514291" CDS complement(2344530..2345210) /locus_tag="Acear_2232" /note="COGs: COG0394 protein-tyrosine-phosphatase; InterPro IPR017867:IPR000106; KEGG: oih:OB2988 protein-tyrosine-phosphatase; PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; SPTR: Q8EM70 protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase" /codon_start=1 /transl_table=11 /product="protein tyrosine phosphatase" /protein_id="YP_003828783.1" /db_xref="GI:302392963" /db_xref="GeneID:9514291" /translation="MGVNILFVCTGNTCRSSMAEYIFRDLDKSEEYEVMSAGVSAVNG KNAAPQAEQIMSEKGIDISDHQSQKLTEDLVRTSDLILTMTHQHKNSILNMFADSENK VFTLKEFVEEIDELEEITDEIDEIYKRISNQREKFLDEKGAKIERLRKRHQELIQEIG EVEDELNRLEGELSDEIAEDKERLNTLQSKVQNLDISDPFGQPASVYRQCAEELEEYI KLLLEKIE" misc_feature complement(<2344881..2345201) /locus_tag="Acear_2232" /note="Low molecular weight phosphatase family; Region: LMWPc; cd00115" /db_xref="CDD:29014" misc_feature complement(order(2345163..2345171,2345175..2345180, 2345184..2345186)) /locus_tag="Acear_2232" /note="Active site [active]" /db_xref="CDD:29014" misc_feature complement(2344629..>2344790) /locus_tag="Acear_2232" /note="valyl-tRNA synthetase; Reviewed; Region: valS; PRK05729" /db_xref="CDD:180225" gene complement(2345252..2346307) /locus_tag="Acear_2233" /db_xref="GeneID:9514292" CDS complement(2345252..2346307) /locus_tag="Acear_2233" /note="COGs: COG0009 Putative translation factor (SUA5); InterProIPR006070:IPR010923:IPR005145:IPR017945:IPR 004388; KEGG: tsi:TSIB_1410 SUA5 superfamily-related protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; SPTR: B5IT72 Sua5/YciO/YrdC/YwlC family protein, TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein" /codon_start=1 /transl_table=11 /product="translation factor SUA5" /protein_id="YP_003828784.1" /db_xref="GI:302392964" /db_xref="GeneID:9514292" /translation="MEVIKGTRLFNLDDRNAISECSSILTDGGLVAFPTETVYGLGAN ALDAEAVNKIFTAKGRPADNPLIVHIASLSQLDKLVLKVPNQVKLLSDRFWPGPLTLV LKKKEIVPDITTGGLDTIAVRLPDHKVALDLLNRCQLPVAAPSANLSGRPSPTLAQHV VTDLGGRIEAIIDGGQTGVGVESTVISLVEDRPTLLRPGGITYQELTEVLGEVDIDSA VKAELESENKSALAPGMKYKHYSPEADVILVEGEAERIAHKITKLADEYLAEGYQVGI MATEENSNFYTAGQVQVMGSRDKLSVISANLFRLLRSFDDSGVDIILIEGVSNQGLGL AIMNRLRKAAGYQVIRV" misc_feature complement(2345711..2346241) /locus_tag="Acear_2233" /note="yrdC domain; Region: Sua5_yciO_yrdC; cl00305" /db_xref="CDD:185891" misc_feature complement(2345261..2345707) /locus_tag="Acear_2233" /note="SUA5 domain; Region: SUA5; pfam03481" /db_xref="CDD:190656" gene complement(2346294..2347217) /locus_tag="Acear_2234" /db_xref="GeneID:9514293" CDS complement(2346294..2347217) /locus_tag="Acear_2234" /EC_number="2.1.1.72" /note="COGs: COG2890 methylase of polypeptide chain release factors; InterPro IPR002052:IPR007848:IPR004556:IPR019874; KEGG: hor:Hore_17960 modification methylase, HemK family; PFAM: methyltransferase small; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: B8CZ26 Modification methylase, HemK family; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small domain; TIGRFAM: HemK family methylases; protein-(glutamine-N5) methyltransferase, release factor-specific" /codon_start=1 /transl_table=11 /product="protein-(glutamine-N5) methyltransferase, release factor-specific" /protein_id="YP_003828785.1" /db_xref="GI:302392965" /db_xref="GeneID:9514293" /translation="MTERLTIKKILKKTTDYFKEHGIETARLDAEVLLADLLDMERIK LYVNFDRPLTEVEINQYRQRVIQRAKRMPVAYIIGYQEFMSLKFKVNEDVLIPRPETE HLVEAVIQRVNKLADKREKLTVIDLCTGSGAIIISLAKELADVPLEINYIGTDVSQEA LAVAKDNAKLHQVQNQIQFLVGDLLNPVKELNLKPDIIISNPPYIADKELQELEPELQ YEPEIALKAGENGIDFYRQIISETEQLLTDGGIIGFEVGNQQSKSVYQLLEENNFINL TVIDDYAEVPRVILGEKALDGRKGSRFNGSN" misc_feature complement(2346348..2347097) /locus_tag="Acear_2234" /note="protein-(glutamine-N5) methyltransferase, release factor-specific; Region: RF_mod_PrmC; TIGR03534" /db_xref="CDD:188335" misc_feature complement(2346450..2346851) /locus_tag="Acear_2234" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cd02440" /db_xref="CDD:100107" misc_feature complement(order(2346615..2346617,2346666..2346674, 2346750..2346755,2346819..2346839)) /locus_tag="Acear_2234" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(2347236..2348315) /locus_tag="Acear_2235" /db_xref="GeneID:9514294" CDS complement(2347236..2348315) /locus_tag="Acear_2235" /note="COGs: COG0216 protein chain release factor A; InterPro IPR000352:IPR005139:IPR004373; KEGG: hor:Hore_17970 peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: B8CZ27 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1" /codon_start=1 /transl_table=11 /product="bacterial peptide chain release factor 1 (bRF-1)" /protein_id="YP_003828786.1" /db_xref="GI:302392966" /db_xref="GeneID:9514294" /translation="MLDCKEALDDAEARYEKLQKMLSDPEVINNQSKFQKLSKEHAEL KKLVKKYRKYKEIMAEIEEAKELLEMEDDEEAVELAKMELAELEPKQEKLEEELPLML IPEDPNDEKNVIVEIRAGTGGDEAALFAGELYRMYSRYAEKQDWDVDIMSSSSSEVGG FKEMIFVVEGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTATVAVLPEAEDVDIEI NQNDLTIETYRSSGPGGQSVNTTDSAVRITHEPTGVVVSCQDEKSQHKNKRKAMRVLR SRIQEKIEAEKQAEEAEKRKMQIGSGGRSERIRTYNFPQGRITDHRINLTTHQMESIL DGEIDELVDELVTADQTEKLEQMYS" misc_feature complement(2347245..2348300) /locus_tag="Acear_2235" /note="peptide chain release factor 1; Validated; Region: prfA; PRK00591" /db_xref="CDD:179074" misc_feature complement(2347776..>2347994) /locus_tag="Acear_2235" /note="RF-1 domain; Region: RF-1; cl02875" /db_xref="CDD:194471" misc_feature complement(2347350..2347691) /locus_tag="Acear_2235" /note="RF-1 domain; Region: RF-1; cl02875" /db_xref="CDD:194471" gene complement(2348465..2349355) /locus_tag="Acear_2236" /db_xref="GeneID:9514295" CDS complement(2348465..2349355) /locus_tag="Acear_2236" /note="COGs: COG3872 metal-dependent protein; InterPro IPR010787; KEGG: hor:Hore_17980 predicted metal-dependent enzyme; PFAM: protein of unknown function DUF1385; SPTR: B8CZ28 Predicted metal-dependent enzyme; PFAM: protein of unknown function (DUF1385)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828787.1" /db_xref="GI:302392967" /db_xref="GeneID:9514295" /translation="MTDKQQCNHQYGGQAVIEGVMMRGSDNLAIAVRKNEDDIVLHTE EVDSVSDRYSILERPFIRGVVSLFESLIMGMKALTFSANQVAEEEEEEELSTWELILT IGTALGLAILLFVVLPATAIKFIQQYVGSDLVLNFIEGVIKVTVFLLYIIGISRLNDI NRVFQYHGAEHKVIYNYEADLPLSIDNARQYSTLHPRCGTNFLLIVMITSVLLFSFFG RPSLLNRILIHIALLPVVAGLSYEIIKLAGKEDANPIIKLIATPGLWLQKLTTREPDD KQLEVAIKALKGVLELEESS" misc_feature complement(2348474..2349181) /locus_tag="Acear_2236" /note="Protein of unknown function (DUF1385); Region: DUF1385; cl01595" /db_xref="CDD:154493" gene complement(2349414..2349611) /locus_tag="Acear_2237" /db_xref="GeneID:9514296" CDS complement(2349414..2349611) /locus_tag="Acear_2237" /note="COGs: COG0254 Ribosomal protein L31; InterPro IPR002150; KEGG: nth:Nther_2874 50S ribosomal protein L31P; PFAM: ribosomal protein L31; SPTR: A7VZA0 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L31P" /protein_id="YP_003828788.1" /db_xref="GI:302392968" /db_xref="GeneID:9514296" /translation="MQKDIHPEYKEATITCACGETFKTKSTKGDLRVEVCSNCHSFYT GKQKQNTRGGRIERFKEKYDL" misc_feature complement(2349423..2349611) /locus_tag="Acear_2237" /note="Ribosomal protein L31; Region: Ribosomal_L31; cl00377" /db_xref="CDD:185951" gene complement(2349684..2350940) /locus_tag="Acear_2238" /db_xref="GeneID:9514297" CDS complement(2349684..2350940) /locus_tag="Acear_2238" /note="COGs: COG1158 transcription termination factor; InterProIPR011129:IPR003593:IPR011112:IPR011113:IPR 000194:IPR004665; KEGG: hor:Hore_18010 transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; SMART: Cold shock protein; AAA ATPase; SPTR: B8CZ31 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho" /codon_start=1 /transl_table=11 /product="transcription termination factor Rho" /protein_id="YP_003828789.1" /db_xref="GI:302392969" /db_xref="GeneID:9514297" /translation="MNIAELQEKTITELHEVAKDLEISGYTRLKKKELIFEILKAETE NGGLIFAEGVLEILPDGYGFLRPSKYLPSTDDIYISASQIKRFDLRTGDVVSGQVRKP KDNERYFALLRIEAVNYEDPELASERAYFEDLTPLYPQERIVLEDNPSDVSTRLMDLI APVGKGQRGLIVAPPKAGKTVLLKKVANSIVKESPESKLMILLIDERPEEVTDMKRSV DAEVISSTFDEPPKNHIKVSELVLKKAKRLVEQKKDVVILLDSITRLARAYNVNVPSS GRTLSGGLDPTALHKPKRFFGAARNIEEGGSLTILATALVETGSRMDDVIYEEFKGTG NMELHLDRTLAEKRLFPAINVQLSGTRKEELLLGDSELNTMWTLRREITDLSKSEVIS SFIKHIKSTDSNQQMLNSLQKAFGKK" misc_feature complement(2349702..2350940) /locus_tag="Acear_2238" /note="transcription termination factor Rho; Provisional; Region: rho; PRK09376" /db_xref="CDD:181809" misc_feature complement(2350800..2350928) /locus_tag="Acear_2238" /note="Rho termination factor, N-terminal domain; Region: Rho_N; pfam07498" /db_xref="CDD:191758" misc_feature complement(2350593..2350790) /locus_tag="Acear_2238" /note="Rho_CSD: Rho protein cold-shock domain (CSD). Rho protein is a transcription termination factor in most bacteria. In bacteria, there are two distinct mechanisms for mRNA transcription termination. In intrinsic termination, RNA polymerase and nascent...; Region: Rho_CSD; cd04459" /db_xref="CDD:88425" misc_feature complement(order(2350617..2350625,2350632..2350634, 2350707..2350709,2350713..2350715,2350743..2350745, 2350749..2350751,2350755..2350757,2350767..2350769, 2350773..2350775)) /locus_tag="Acear_2238" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:88425" misc_feature complement(2349744..2350490) /locus_tag="Acear_2238" /note="Transcription termination factor rho is a bacterial ATP-dependent RNA/DNA helicase. It is a homohexamer. Each monomer consists of an N-terminal domain of the OB fold, which is responsible for binding to cysteine rich nucleotides. This alignment is of...; Region: rho_factor; cd01128" /db_xref="CDD:29994" misc_feature complement(order(2349801..2349803,2349813..2349815, 2349855..2349860,2349930..2349932,2349936..2349950, 2349954..2349959,2350032..2350034,2350041..2350043, 2350050..2350052,2350059..2350064,2350071..2350073, 2350104..2350106,2350437..2350439)) /locus_tag="Acear_2238" /note="multimer interface [polypeptide binding]; other site" /db_xref="CDD:29994" misc_feature complement(2350401..2350424) /locus_tag="Acear_2238" /note="Walker A motif; other site" /db_xref="CDD:29994" misc_feature complement(order(2349891..2349893,2350398..2350409, 2350413..2350415)) /locus_tag="Acear_2238" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:29994" misc_feature complement(2350161..2350175) /locus_tag="Acear_2238" /note="Walker B motif; other site" /db_xref="CDD:29994" gene complement(2351289..2352140) /locus_tag="Acear_2239" /db_xref="GeneID:9514298" CDS complement(2351289..2352140) /locus_tag="Acear_2239" /EC_number="4.1.2.13" /EC_number="4.1.2.40" /note="COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR000771:IPR013785:IPR011289; KEGG: hor:Hore_18020 fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II; PRIAM: Tagatose-bisphosphate aldolase; SPTR: B8CZ32 Fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist" /codon_start=1 /transl_table=11 /product="fructose-bisphosphate aldolase" /protein_id="YP_003828790.1" /db_xref="GI:302392970" /db_xref="GeneID:9514298" /translation="MSLVPMSDILTKANEEGYAVGGFNMNNLEALQAIIEAAEEENSP VILQASEGAIRYIDMEYAVAMAKAAGEKASVPVAFHLDHGGSFEKVIQCIRNGFSSVM IDGSELPFEENIALTNKVIEAASAVGVSVEAELGMLGGAEDDKEVEDQDATLTNPEEA VEFVDKTGVDALAVAIGTAHGVYKGEPELDFERLDNINQKVAVPLVLHGASGVSDEDI AEAIELGINKINVNTAFQQAFTAKTRQVLEDPDVYDPRKICGPSREAMKEKVIEKIRL FGSHNKA" misc_feature complement(2351292..2352125) /locus_tag="Acear_2239" /note="hypothetical protein; Provisional; Region: PRK08185" /db_xref="CDD:181275" misc_feature complement(2351298..2352125) /locus_tag="Acear_2239" /note="Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose...; Region: TBP_aldolase_IIB; cd00947" /db_xref="CDD:29573" misc_feature complement(order(2351400..2351402,2351409..2351411, 2351421..2351423,2351430..2351435,2351439..2351444, 2351715..2351717,2351934..2351939,2351946..2351948, 2351958..2351960,2351970..2351978,2351985..2351987, 2352045..2352047,2352054..2352062)) /locus_tag="Acear_2239" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:29573" misc_feature complement(order(2351442..2351447,2351451..2351453, 2351508..2351510,2351514..2351519,2351592..2351594, 2351598..2351606,2351892..2351897)) /locus_tag="Acear_2239" /note="active site" /db_xref="CDD:29573" misc_feature complement(order(2351517..2351519,2351601..2351603, 2351892..2351894)) /locus_tag="Acear_2239" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:29573" misc_feature complement(order(2351508..2351510,2351514..2351516, 2351592..2351594,2351598..2351600,2351604..2351606)) /locus_tag="Acear_2239" /note="Na+ binding site [ion binding]; other site" /db_xref="CDD:29573" gene complement(2352177..2352809) /locus_tag="Acear_2240" /db_xref="GeneID:9514299" CDS complement(2352177..2352809) /locus_tag="Acear_2240" /note="KEGG: pth:PTH_2839 hypothetical protein; SPTR: A5CY96 Hypothetical membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828791.1" /db_xref="GI:302392971" /db_xref="GeneID:9514299" /translation="MLFDYKVTLALRCPICGELELHPFTVFDFSGQDSLEIKCSCGFN KMTITTNNYKQYWLQFACLVCETEHVVTYRNNELWSPEVKEISCLENDLELGYLGSEA EIRELIDEEKQLGSIFSEIGIENYFSNSDIMLLALNSLYDIADSGDLFCQCGNRDIEI DMFPGRIELFCRECDGLITINAETEEDLTFLKNIKKIEMLEGVVSALEKN" gene complement(2352877..2353431) /locus_tag="Acear_2241" /db_xref="GeneID:9514300" CDS complement(2352877..2353431) /locus_tag="Acear_2241" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828792.1" /db_xref="GI:302392972" /db_xref="GeneID:9514300" /translation="MRLFIKLLVITLLIIFMFQVSVAAEVQQRLKGEIVAVNSQQGSF LFKSSGDLKEYQVNLHTKLSLNGSQVNLKALRPVTEEDFQPAVIKLNNQGNLIEVRAE YDALPIEIRSVSKDKANLKVNILNSNKVLDITYQEEIILIRNGSQIEIDELQPGDQGL VILGLEDKVRKIKVKNYQYRGEAE" gene complement(2353540..2355132) /locus_tag="Acear_2242" /db_xref="GeneID:9514301" CDS complement(2353540..2355132) /locus_tag="Acear_2242" /EC_number="6.3.4.2" /note="COGs: COG0504 CTP synthase (UTP-ammonia lyase); InterPro IPR017926:IPR017456:IPR000991:IPR004468; KEGG: hor:Hore_18060 CTP synthase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; PRIAM: CTP synthase; SPTR: B8CZ36 CTP synthase; TIGRFAM: CTP synthase; PFAM: glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase" /codon_start=1 /transl_table=11 /product="CTP synthase" /protein_id="YP_003828793.1" /db_xref="GI:302392973" /db_xref="GeneID:9514301" /translation="MTKYIFVTGGVVSSLGKGITAASLGRLLKSRGLNVRIQKFDPYI NVDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDNSLTKNCNVTTGQIYQSVITKE RRGDYLGGTVQVIPHITDEIKERVTRVGKESNADVVITEIGGTIGDIEGLPFVEAIRQ LRGDLGAENVMYIHCTLIPYLEAAGELKTKPTQHSVKELRSVGIQPNIIVCRADRQLT QEVKDKIALFCDIEKEAVIPLIDADCIYEIPLIVEKEGLANIVVDRLNLDVDKPDLDN WKQLVDRMKNLGGETEIAIVGKYIELQDAYISIVESLKHAGIVNDAEINIRWIYAEDL EGEDAAEYLSGVDGILVPGGFGDRGIEGKINSIKYARQENVPFLGLCLGMQCAVIEFA RNVCGLQEANSAEFNDITPDPVIDILPEQKDIEEKGGTMRLGTYPCKVKEGTLTDEAY DEEVIYERHRHRYEFNNYYRKLFEQSGMIFSGVSPDNKLVEIIELEDHSWFVATQFHP EFRSRPNRPHPLFTKFVEATME" misc_feature complement(2353543..2355132) /locus_tag="Acear_2242" /note="CTP synthetase; Validated; Region: pyrG; PRK05380" /db_xref="CDD:180047" misc_feature complement(2354362..2355126) /locus_tag="Acear_2242" /note="CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain. The enzymes hydrolyze the amide bond of glutamine to ammonia and glutamate at the glutaminase domains and transfer...; Region: CTGs; cd03113" /db_xref="CDD:48377" misc_feature complement(order(2354704..2354706,2354710..2354712, 2354908..2354913,2354920..2354922,2354926..2354928, 2355004..2355012,2355016..2355018,2355076..2355087, 2355094..2355096)) /locus_tag="Acear_2242" /note="Catalytic site [active]" /db_xref="CDD:48377" misc_feature complement(order(2354461..2354463,2354563..2354571, 2354701..2354703,2355016..2355018,2355079..2355093)) /locus_tag="Acear_2242" /note="Active site [active]" /db_xref="CDD:48377" misc_feature complement(order(2354461..2354463,2354563..2354571, 2354683..2354685,2354701..2354706,2355004..2355018)) /locus_tag="Acear_2242" /note="UTP binding site [chemical binding]; other site" /db_xref="CDD:48377" misc_feature complement(2353558..2354259) /locus_tag="Acear_2242" /note="Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase; Region: GATase1_CTP_Synthase; cd01746" /db_xref="CDD:153217" misc_feature complement(order(2353606..2353608,2353612..2353614, 2353744..2353755,2353918..2353920,2353978..2353980, 2353987..2353992,2354065..2354079)) /locus_tag="Acear_2242" /note="active site" /db_xref="CDD:153217" misc_feature complement(order(2353987..2353989,2354071..2354073)) /locus_tag="Acear_2242" /note="putative oxyanion hole; other site" /db_xref="CDD:153217" misc_feature complement(order(2353606..2353608,2353612..2353614, 2353990..2353992)) /locus_tag="Acear_2242" /note="catalytic triad [active]" /db_xref="CDD:153217" gene complement(2355179..2356864) /locus_tag="Acear_2243" /db_xref="GeneID:9514302" CDS complement(2355179..2356864) /locus_tag="Acear_2243" /EC_number="6.1.1.19" /note="COGs: COG0018 Arginyl-tRNA synthetase; InterProIPR001412:IPR015945:IPR005148:IPR008909:IPR 009080:IPR014729:IPR001278; KEGG: dae:Dtox_0052 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; arginyl tRNA synthetase domain protein; DALR anticodon binding domain protein; PRIAM: Arginine--tRNA ligase; SPTR: Q2LVV5 Arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="arginyl-tRNA synthetase" /protein_id="YP_003828794.1" /db_xref="GI:302392974" /db_xref="GeneID:9514302" /translation="MSNIVSEIRDDLIIEIKDAIRRAVDEEILNLDNPPDDVMLEVPR EEGHGDYATNIAMVLAGQAGMAPRDIAQVIVDNLAELELVSKVEIAGPGFINFYLVDE WLYQIIETVLNEKEDYGKSNFGNGKKVQIEFVSANPTGPLHVGHGRGAVAGDVLGNIM SAAGFDVAKEYYINDAGNQMELLGKSVALRYQELLGADITMPENSYQGDYIEKIAAKI ETEYGDKYLTDVQDGNYEFFREFAYEQLLANIKADLQAFGIEFDNWFSERKLHQEDKI GEVVAQLKEDGYLYEEEGALWLKSTDFGDDKDRVVIKDNGVPTYLAADIAYHDNKYQR GFEEVINVWGADHHGYIARMKAAVEALGYSPEMLKVIIVQMVTLLRDGKQVSMSKRAG DFITLRDVVDEVGCDAARYFYVMRSTDSHLDFDLDLAKEESAENPVYYIQYAHARICS ILDQIKKEEIKIEDVSGVDLERLDTEVELDLIQKLGDYPEELAESAKSREPHHMARYA YELAAQFHSFYNKCHVLIQDEEVMQARLQLVLAVKQVLSNLLNILGVSAPESM" misc_feature complement(2355182..2356843) /locus_tag="Acear_2243" /note="arginyl-tRNA synthetase; Reviewed; Region: argS; PRK01611" /db_xref="CDD:179308" misc_feature complement(2356568..2356822) /locus_tag="Acear_2243" /note="Arginyl tRNA synthetase N terminal domain; Region: Arg_tRNA_synt_N; pfam03485" /db_xref="CDD:190660" misc_feature complement(2355689..2356483) /locus_tag="Acear_2243" /note="catalytic core domain of arginyl-tRNA synthetases; Region: ArgRS_core; cd00671" /db_xref="CDD:185675" misc_feature complement(order(2355815..2355817,2355824..2355826, 2355893..2355895,2355905..2355907,2356427..2356429, 2356436..2356438,2356454..2356456,2356460..2356462, 2356469..2356471)) /locus_tag="Acear_2243" /note="active site" /db_xref="CDD:185675" misc_feature complement(2356427..2356438) /locus_tag="Acear_2243" /note="HIGH motif; other site" /db_xref="CDD:185675" misc_feature complement(2355695..2355706) /locus_tag="Acear_2243" /note="KMSK motif region; other site" /db_xref="CDD:185675" misc_feature complement(2355182..2355661) /locus_tag="Acear_2243" /note="Anticodon-binding domain of arginyl tRNA synthetases; Region: Anticodon_Ia_Arg; cd07956" /db_xref="CDD:153410" misc_feature complement(order(2355248..2355250,2355308..2355310, 2355314..2355316,2355326..2355328,2355347..2355349, 2355374..2355376,2355494..2355496,2355512..2355517, 2355524..2355529,2355536..2355538,2355545..2355547, 2355557..2355559,2355563..2355571)) /locus_tag="Acear_2243" /note="tRNA binding surface [nucleotide binding]; other site" /db_xref="CDD:153410" misc_feature complement(order(2355182..2355187,2355248..2355250, 2355290..2355301,2355308..2355310,2355494..2355496, 2355512..2355517,2355524..2355529,2355536..2355538)) /locus_tag="Acear_2243" /note="anticodon binding site; other site" /db_xref="CDD:153410" gene complement(2356857..2357297) /locus_tag="Acear_2244" /db_xref="GeneID:9514303" CDS complement(2356857..2357297) /locus_tag="Acear_2244" /note="COGs: COG4506 conserved hypothetical protein; InterPro IPR015231:IPR011038; KEGG: dhd:Dhaf_4847 domain of unknown function DUF1934; PFAM: Domain of unknown function DUF1934; SPTR: B8G0A6 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1934)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828795.1" /db_xref="GI:302392975" /db_xref="GeneID:9514303" /translation="MEVDTLESVVVNVESIQIDETGKKEEISFTTKGSLYQKKFSYYL RYEEELGTDQAVTTTLKIKDDVLTLIRDGAVRMKQDFVAGETGSFSYQTPYGKLEFNL TVEQVYIETAAKQGRIELKYTLKDRDKLVSQNQLLITYKEGLNV" misc_feature complement(2356884..2357267) /locus_tag="Acear_2244" /note="Domain of unknown function (DUF1934); Region: DUF1934; cl01870" /db_xref="CDD:154634" gene complement(2357369..2357824) /locus_tag="Acear_2245" /db_xref="GeneID:9514304" CDS complement(2357369..2357824) /locus_tag="Acear_2245" /note="COGs: COG2707 membrane protein; InterPro IPR007382; KEGG: hdu:HD1071 hypothetical protein; PFAM: protein of unknown function DUF441; SPTR: Q7VMB8 Putative uncharacterized protein; PFAM: protein of unknown function (DUF441)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828796.1" /db_xref="GI:302392976" /db_xref="GeneID:9514304" /translation="MSQTNLILIILFILGLLSKDHALIISALILFGLKNLKLDHWLPV VEQYSVKVGIMLIMLGILTPVATGELDLLQIKETIKTPLGVIGVGMGIIVTLLTRDGL NLMNTTPEVVPNLVVGIILGIAFFGGVPSGPIIASGITAFLIKIFRFLS" misc_feature complement(2357393..2357773) /locus_tag="Acear_2245" /note="Protein of unknown function (DUF441); Region: DUF441; cl01041" /db_xref="CDD:194016" gene complement(2357900..2358979) /locus_tag="Acear_2246" /db_xref="GeneID:9514305" CDS complement(2357900..2358979) /locus_tag="Acear_2246" /note="COGs: COG3581 conserved hypothetical protein; KEGG: swo:Swol_0631 hypothetical protein; SPTR: Q0AZ95 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828797.1" /db_xref="GI:302392977" /db_xref="GeneID:9514305" /translation="MLVTFPQMGDLNIPLESLFDKLGIDTLSPPPLTERTLNLGVRYA PESSCLPFKLVLGNFIEALEEGAEVLMIAGGNGPCRFGHFGELAEEILKDLGYEFKLY ILEPPISSILETITELSSDFSWLKALSALRLAWNKLIIIEKLKKYRLQLGVGLSRERS RRLDNKYLQLVAEAEANKELTGIKRKFKSELNSLVSERDSANVKIGLVGDIYTVLEPF ANLDIERRLNQLGAVVNRGVFLSNWIKENLIYGGLGLNKNRKVNKAARDYLKIGVGGL GLETVGETVLYSHQDYDGVLQLAPFGCMPEIVAQSALTEIEQDLGIPTLTLVVDEHSS AAGVQTRLEAFVDLLQRRKQNTISN" misc_feature complement(2357903..2358979) /locus_tag="Acear_2246" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3581" /db_xref="CDD:33381" misc_feature complement(2357903..2358946) /locus_tag="Acear_2246" /note="CoA enzyme activase uncharacterised domain (DUF2229); Region: DUF2229; cl12083" /db_xref="CDD:159743" gene complement(2359043..2359999) /locus_tag="Acear_2247" /db_xref="GeneID:9514306" CDS complement(2359043..2359999) /locus_tag="Acear_2247" /note="COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR002731:IPR008275; KEGG: pth:PTH_1325 activator of 2-hydroxyglutaryl-CoA dehydratase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; SPTR: A5D2M2 Activator of 2-hydroxyglutaryl-CoA dehydratase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase" /codon_start=1 /transl_table=11 /product="CoA-substrate-specific enzyme activase" /protein_id="YP_003828798.1" /db_xref="GI:302392978" /db_xref="GeneID:9514306" /translation="MKGYLGIDVGSVSINIVILDTDGEVIKKSYLRTKGQPIEVVQQG LKDLSQSLPDDLEIAGVGTTGSGRNLIGVIVGADTIKNEITAHAVAASHILPEVRTVL EIGGQDSKLTILRDGIVVDFAMNTVCAAGTGSFLDQQASRLGIPIEDFGKLALKSNNK VRIAGRCSVFAESDMIHKQQMGHNVEDIIAGLCEALVRNYLNNVGQGKEIREPIIFQG GVAANDGIKQAFEEALETEVTVPEHHEVMGAIGAGLLAKEEVNYSNKETNFEGLKITD VDYTPFSFECDGCSNLCEVIEIRMEGELIARWGYKCNKWDLI" misc_feature complement(2359235..2359987) /locus_tag="Acear_2247" /note="FGGY family of carbohydrate kinases, N-terminal domain; Region: FGGY_N; cl09121" /db_xref="CDD:195797" gene complement(2359996..2361081) /locus_tag="Acear_2248" /db_xref="GeneID:9514307" CDS complement(2359996..2361081) /locus_tag="Acear_2248" /note="COGs: COG3581 conserved hypothetical protein; KEGG: nth:Nther_0110 hypothetical protein; SPTR: B2A3T3 Putative uncharacterized protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828799.1" /db_xref="GI:302392979" /db_xref="GeneID:9514307" /translation="MKVTFPYMGTSQIVFKALMDELGHKAVVKPPGKRTLTLGTKYAP EFACIPFKILLGTYIESLEEGAEMIITSGGHGPCRAGHYGQLHEKILRDLGYDFEMVV FESLADGFSDFITNIRRVAGPDLSWWQILKLIRKGWTRLKALDEIERLSHKVRPRELD QGAATEAFDKAKEIIRTAATVAEIKEAKEEGIRLLQNVEQEEDYEPLKIGLVGEIYVV LEPSANLEIEETLGEMGVEVDSSIYLTDWTKEHTFFMPAEETVEEAAKPYLDQLVGGH GQESIGNTVLYAKNGFDGVIQLAPFTCIPEIVAKSILPQVSKDYNIPFLTLFLDEKTG KAGTVTRLEAFVDLLARKRDRNRRELP" misc_feature complement(2360014..2361081) /locus_tag="Acear_2248" /note="Uncharacterized protein conserved in bacteria [Function unknown]; Region: COG3581" /db_xref="CDD:33381" misc_feature complement(2360008..2361039) /locus_tag="Acear_2248" /note="CoA enzyme activase uncharacterised domain (DUF2229); Region: DUF2229; cl12083" /db_xref="CDD:159743" gene complement(2361078..2362055) /locus_tag="Acear_2249" /db_xref="GeneID:9514308" CDS complement(2361078..2362055) /locus_tag="Acear_2249" /note="COGs: COG3580 conserved hypothetical protein; KEGG: nth:Nther_0109 hypothetical protein; SPTR: B2A3T2 Putative uncharacterized protein; PFAM: CoA enzyme activase uncharacterised domain (DUF2229)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828800.1" /db_xref="GI:302392980" /db_xref="GeneID:9514308" /translation="MSAKIGIPKALSYYVYYPLWEKFFTELGAQVITSDNTSRYIVDD GVKETVNDACVPIKLFHGHVLNLKDRVDYLFLPRLVSTNGEQVYCPKFLGLPDMVRNT LDGLPEIISPRVDIRQGRFKFIKMLYQVGARLTKNPFKIYSAFSKARHYFSDFQSLLQ QGYTVDEAIRGLRGEEVELDNNQAKLKVAVLGYPYIIYDPHISVNMIGKLRDLGVEVV TGDMVSAEELAAQSPKLKKDLFWTLSDKKIKAGYHYYEAGEIDGLIHVTAFGCGPDFM VDELLELAAKNKDDISFMTLTVDEHTGEAGIVTRLEAFIDMLDLRGRKQ" misc_feature complement(2361387..2362046) /locus_tag="Acear_2249" /note="CoA enzyme activase uncharacterised domain (DUF2229); Region: DUF2229; cl12083" /db_xref="CDD:159743" gene complement(2362253..2363584) /locus_tag="Acear_2250" /db_xref="GeneID:9514309" CDS complement(2362253..2363584) /locus_tag="Acear_2250" /EC_number="6.3.1.2" /note="COGs: COG0174 glutamine synthetase; InterPro IPR008147:IPR008146:IPR014746:IPR004809; KEGG: hor:Hore_21290 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; PRIAM: glutamate--ammonia ligase; SPTR: B8D022 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic domain; glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I" /codon_start=1 /transl_table=11 /product="L-glutamine synthetase" /protein_id="YP_003828801.1" /db_xref="GI:302392981" /db_xref="GeneID:9514309" /translation="MSLTKEDILQQAEELDVKFIRMQFTDILGITKNVAITVEQLEEA LEGNTMFDGSSIEGFTRIQESDMYLEPDYDTFTIFPWRPNEGGTVARLICDVYDADGN PFSGGPRNILKKVIKEAAEMGYEMYAGPEPEFFLFETDENGEPTTITHDKGGYFDLSP VDLGYNTRRDISLALEEMGFEVEASHHEVAPGQHEIDFKYADALKTADNIATFKFVTK AIAKEHGLHATFMPKPIFGENGSGMHMNQSLFKDGENAFYDPDDELGLSKIAYHYIGG LMKHAKAIAAITNPTINSYKRLVPGYEAPVYMAWSSANRSALVRIPASRGEGTRVEMR NPDPAANPYLAMAVMLKAGLDGIKNEIDPGEETLDNIYDMTDAERKEAGIDSLPGDLM SALGQLKQDEVIKSALGEHAYTHFVKGKTIEWNVYRNQVHQWELDQYLETF" misc_feature complement(2362265..2363569) /locus_tag="Acear_2250" /note="glutamine synthetase, type I; Region: GlnA; TIGR00653" /db_xref="CDD:161979" misc_feature complement(2363291..2363539) /locus_tag="Acear_2250" /note="Glutamine synthetase, beta-Grasp domain; Region: Gln-synt_N; pfam03951" /db_xref="CDD:146534" misc_feature complement(2362526..2363263) /locus_tag="Acear_2250" /note="Glutamine synthetase, catalytic domain; Region: Gln-synt_C; pfam00120" /db_xref="CDD:189401" gene complement(2363766..2364491) /locus_tag="Acear_2251" /db_xref="GeneID:9514310" CDS complement(2363766..2364491) /locus_tag="Acear_2251" /EC_number="6.3.1.5" /note="COGs: COG0171 NAD synthase; InterPro IPR003694:IPR014729; KEGG: hor:Hore_19030 NH(3)-dependent NAD(+) synthetase; PFAM: NAD synthase; SPTR: B8CZD2 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; TIGRFAM: NAD+ synthetase" /codon_start=1 /transl_table=11 /product="NH(3)-dependent NAD(+) synthetase" /protein_id="YP_003828802.1" /db_xref="GI:302392982" /db_xref="GeneID:9514310" /translation="MRYYDELSEKLSQWIKEQILEAGCKGAVVGLSGGIDSAVTAVLC KQAFPDSTLGLIMPCYSSPEDSEDAELVADKFGIEVETVDLNQTFDILYAELEDDDRA EDNMAVANIKPRLRMTVLYYYAANLNRLVVGTDNRSELEVGYFTKHGDGGVDIAPLGN LVKTEVRQLAKYLEIPERIITKPPTAGLWSDQTDEAELGITYEELDRYILTGEAEPEV KERIENLVAQNEHKLGYPPTPEF" misc_feature complement(2363796..2364482) /locus_tag="Acear_2251" /note="NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD). The conversion of NaAD to...; Region: NAD_synthase; cd00553" /db_xref="CDD:30166" misc_feature complement(2363784..2364467) /locus_tag="Acear_2251" /note="NAD synthase; Region: NAD_synthase; pfam02540" /db_xref="CDD:145596" misc_feature complement(order(2363799..2363801,2364012..2364017, 2364024..2364041,2364048..2364053,2364114..2364119, 2364123..2364131,2364135..2364143,2364147..2364152, 2364159..2364161,2364171..2364173,2364222..2364227, 2364234..2364239,2364246..2364257,2364438..2364443, 2364450..2364452,2364459..2364464)) /locus_tag="Acear_2251" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:30166" misc_feature complement(order(2363796..2363801,2363901..2363903, 2363928..2363930,2363934..2363939,2364042..2364044, 2364051..2364062,2364075..2364077,2364090..2364092, 2364144..2364146,2364150..2364155,2364162..2364164, 2364174..2364176,2364321..2364329,2364381..2364383, 2364396..2364407)) /locus_tag="Acear_2251" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:30166" misc_feature complement(order(2363937..2363942,2364003..2364005, 2364090..2364092,2364144..2364146,2364321..2364326, 2364381..2364386,2364396..2364404)) /locus_tag="Acear_2251" /note="ATP binding pocket [chemical binding]; other site" /db_xref="CDD:30166" misc_feature complement(order(2363937..2363939,2364075..2364077, 2364384..2364386,2364396..2364398)) /locus_tag="Acear_2251" /note="Mg binding site [ion binding]; other site" /db_xref="CDD:30166" misc_feature complement(order(2363898..2363921,2363928..2363951, 2364303..2364305)) /locus_tag="Acear_2251" /note="active-site loop [active]" /db_xref="CDD:30166" gene 2364623..2365810 /locus_tag="Acear_2252" /db_xref="GeneID:9514311" CDS 2364623..2365810 /locus_tag="Acear_2252" /note="COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: gme:Gmet_2690 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Q39S66 peptidase M24; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain" /codon_start=1 /transl_table=11 /product="peptidase M24" /protein_id="YP_003828803.1" /db_xref="GI:302392983" /db_xref="GeneID:9514311" /translation="MNNISKEELNSRISELQQKLKKQNIDSAVIIQNADLFYFTGTVQ AEYLYIPDSGEAVLLVRRGNKRAEKETALEKIVEFKRSAEIPEIIKKEDLDSPDELGL ELDILPYKTANKLQQIFAADKITNITTLIRQVRMVKSDSEIQLIKRAANKLKAVPQLT KEHLTADMNELELSAIIEQDLRQKGHTGFVRMRGLNNELPLGVCTAGKKSTAEVQVDS ICAGAGVHPSAGVGASKSRLKDSEPIILDYVATHQGYIADQTRMAVLGKPSAYLQKTY DKMVQLQTELSKYLTPDYSWQEIYEEGKRLAEELEVTDYYLGYGDNKEKFVGHGVGVE LNEFPFLATGLDFKLKPGMTIALEPKLVVPDIGAIGIENTYLVTENQPKKLTTASEEL IKV" misc_feature 2364632..2365801 /locus_tag="Acear_2252" /note="Xaa-Pro aminopeptidase [Amino acid transport and metabolism]; Region: PepP; COG0006" /db_xref="CDD:30356" misc_feature 2364656..2365033 /locus_tag="Acear_2252" /note="Creatinase/Prolidase N-terminal domain; Region: Creatinase_N; pfam01321" /db_xref="CDD:189940" misc_feature 2365049..2365768 /locus_tag="Acear_2252" /note="A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate...; Region: APP_MetAP; cd01066" /db_xref="CDD:29969" misc_feature order(2365298..2365300,2365361..2365363,2365394..2365396, 2365607..2365609,2365694..2365696,2365736..2365738) /locus_tag="Acear_2252" /note="active site" /db_xref="CDD:29969" gene complement(2365840..2366934) /locus_tag="Acear_2253" /db_xref="GeneID:9514312" CDS complement(2365840..2366934) /locus_tag="Acear_2253" /note="COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterProIPR018062:IPR018060:IPR001789:IPR020449:IPR 000005:IPR011006:IPR009057:IPR012287; KEGG: tex:Teth514_0399 response regulator receiver protein; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; SPTR: C6PBQ1 Two component transcriptional regulator, AraC family; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, AraC family" /protein_id="YP_003828804.1" /db_xref="GI:302392984" /db_xref="GeneID:9514312" /translation="MMYKILIVDDESLERQAMRRLITEQVQELRLIGEATNGEEGIEI TKEENPDIVLMDIKMPKVDGLEATKEIIDLYPGTKIIIITAYNEFDYAQQAIKYGAVD YLLKPVKPDKIIGILEELITEIEEERLYNQLLSHCYDDSEESIKFHQEFFDKEKKLYE LVKEGNVQEVENFIDRSLSLIRRKGDYSLVKLKIRIIEFLVSLSRTINQEAEIDICHF YFEELLSESAELNTALQFITWLKDKLKEVIKKVEDAYDEIDNDVVKRATNYIKQNFHQ DLTLEEVAKEVHLNSSYLSHVFKEEMGCGFTDYLTEIRLDKAQELLRNSNQNVTVIAN QVGYKNANYFSQVFKKKFNLTPTQYRKKNN" misc_feature complement(2366599..2366922) /locus_tag="Acear_2253" /note="Response regulator receiver domain; Region: Response_reg; pfam00072" /db_xref="CDD:143854" misc_feature complement(2366599..2366919) /locus_tag="Acear_2253" /note="Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems...; Region: REC; cd00156" /db_xref="CDD:29071" misc_feature complement(order(2366614..2366619,2366626..2366628, 2366683..2366685,2366743..2366745,2366767..2366769, 2366905..2366910)) /locus_tag="Acear_2253" /note="active site" /db_xref="CDD:29071" misc_feature complement(2366767..2366769) /locus_tag="Acear_2253" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:29071" misc_feature complement(order(2366743..2366751,2366755..2366760)) /locus_tag="Acear_2253" /note="intermolecular recognition site; other site" /db_xref="CDD:29071" misc_feature complement(2366611..2366619) /locus_tag="Acear_2253" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:29071" misc_feature complement(2366002..2366127) /locus_tag="Acear_2253" /note="Bacterial regulatory helix-turn-helix proteins, AraC family; Region: HTH_AraC; pfam00165" /db_xref="CDD:143933" misc_feature complement(2365855..2366106) /locus_tag="Acear_2253" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:128636" misc_feature complement(2365852..2365974) /locus_tag="Acear_2253" /note="Bacterial regulatory helix-turn-helix proteins, AraC family; Region: HTH_AraC; pfam00165" /db_xref="CDD:143933" gene complement(2366924..2368363) /locus_tag="Acear_2254" /db_xref="GeneID:9514313" CDS complement(2366924..2368363) /locus_tag="Acear_2254" /note="COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR005467:IPR003594:IPR018771:IPR010559; KEGG: tex:Teth514_1959 histidine kinase; PFAM: histidine kinase internal region; transcriptional regulator, histidine kinase sensor-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B0K3C6 Histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Predicted histidine kinase sensor domain" /codon_start=1 /transl_table=11 /product="signal transduction histidine kinase, LytS" /protein_id="YP_003828805.1" /db_xref="GI:302392985" /db_xref="GeneID:9514313" /translation="MLHSGEMNIKEVLDYINYKLSDNDLEKIKIKKNGTSVCLQTQID DGIPIVSRLKGAVNMPSFLNIDQDLNLTDLIDVDILQQIQDRFAEATGLAAIIVDDQG DPVTEPSNFSDICSLVLSTDEGKKSCFNYNFSKDDFESKEDPVVFHCHMGFVDLVIPI IVADECFGVVKCGQILPKESEDEIVNKVKKRLNNLNISNVEVEGLLQQMKQIPRPKIN AAATLLSLLANYIVEMSATTLIQKQLHFKNYQLMQEVNNRMEVEKNLQQAELKALQSQ MNPHFLFNSLNIIARLAFLEGADQTEEMIHSLSDLLRYSLRKEEIVTLGEELNYIKDY IKIQKARFGERIEFVIDVDEDLLSYKIPFMSLQPLVENGIIHGLEPKDESGKIEILSE EAEDKLIIKVVDDGIGIKQEKIREIIEARERTVTETHTSSMGINNVHQRLKHYYGSKY GVQIYSTKGEGTEVRISFPKLESGGDDDV" misc_feature complement(<2367812..2368159) /locus_tag="Acear_2254" /note="Predicted sensor domain [Signal transduction mechanisms / Transcription]; Region: PocR; COG4936" /db_xref="CDD:34544" misc_feature complement(2367635..2368153) /locus_tag="Acear_2254" /note="Predicted histidine kinase sensor domain; Region: Hist_Kin_Sens; pfam10114" /db_xref="CDD:150753" misc_feature complement(2366948..2367592) /locus_tag="Acear_2254" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: COG3920" /db_xref="CDD:33706" misc_feature complement(2367314..2367559) /locus_tag="Acear_2254" /note="Histidine kinase; Region: His_kinase; pfam06580" /db_xref="CDD:191560" misc_feature complement(2366954..2367268) /locus_tag="Acear_2254" /note="Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins; Region: HATPase_c; cl00075" /db_xref="CDD:193644" gene complement(2368362..2368544) /locus_tag="Acear_2255" /pseudo /db_xref="GeneID:9514314" gene complement(2369024..2369503) /locus_tag="Acear_2256" /db_xref="GeneID:9514315" CDS complement(2369024..2369503) /locus_tag="Acear_2256" /note="COGs: COG1576 conserved hypothetical protein; InterPro IPR003742; KEGG: hor:Hore_20240 conserved hypothetical protein TIGR00246; PFAM: protein of unknown function DUF163; SPTR: B8CZR7 Ribosomal RNA large subunit methyltransferase H; PFAM: Predicted SPOUT methyltransferase; TIGRFAM: conserved hypothetical protein TIGR00246" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003828806.1" /db_xref="GI:302392986" /db_xref="GeneID:9514315" /translation="MQVNLITIGSLKADYIQRGSDEFSKRLSRYTDLEIIEIKAEKLR SNLSDAEKDKIKKQEAERILKKMSNTAYSIALDYQGKHMTSKGLAKSINNLQLQGYSE LDFIIGGTLGLHSQVKDAADHVLSLSNMTFTHEMARLILLEQIYRAFKILNGEEYHR" misc_feature complement(2369027..2369503) /locus_tag="Acear_2256" /note="Predicted SPOUT methyltransferase; Region: SPOUT_MTase; cl00679" /db_xref="CDD:186141" gene complement(2369524..2370681) /locus_tag="Acear_2257" /db_xref="GeneID:9514316" CDS complement(2369524..2370681) /locus_tag="Acear_2257" /EC_number="3.4.21.108" /note="COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR001940:IPR001254:IPR009003; KEGG: dtu:Dtur_1305 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: B8E0D4 2-alkenal reductase; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)" /codon_start=1 /transl_table=11 /product="HtrA2 peptidase" /protein_id="YP_003828807.1" /db_xref="GI:302392987" /db_xref="GeneID:9514316" /translation="MSPFFDDNGYRESSLFSYFLVALIGAVIGGLLVAFLVPGLVDET DQHRLETKSSPQQIDQSKSRNSNSNTSVTEVVNKVGPAVVKITTVENRLIYDFFYGRR NKQVTGEGSGVIFDKRGYILTNNHVVAEADRIKVLLTLDQNKQQEFSGEVVGRDPVTD LAVVKIEADKLPVAELGDSDNLQVGQLTIAIGNPFGLSNTVTTGVISAVGRKLEIQQG TELTDMIQTDAAINPGNSGGALLDSEGKVIGINTAIVQGAQGLGFAIPINTAQNVAEE IIEKGRVIRPWLGIYGITLNSNLAREYDLSQQKGVFIAEVIKNSPAYKGGLRQGDIIS KIGGKPVETMTKLRNHLKELEIGEKIQIEFYREENLKKTTVELESQPKTIK" misc_feature complement(2369533..2370522) /locus_tag="Acear_2257" /note="Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]; Region: DegQ; COG0265" /db_xref="CDD:30614" misc_feature complement(2369863..2370393) /locus_tag="Acear_2257" /note="Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic...; Region: Tryp_SPc; cl00149" /db_xref="CDD:193682" misc_feature complement(2369557..2369826) /locus_tag="Acear_2257" /note="PDZ domain of tryspin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-...; Region: PDZ_serine_protease; cd00987" /db_xref="CDD:29044" misc_feature complement(order(2369638..2369643,2369650..2369655, 2369806..2369808,2369812..2369823)) /locus_tag="Acear_2257" /note="protein binding site [polypeptide binding]; other site" /db_xref="CDD:29044" gene complement(2370700..2371503) /locus_tag="Acear_2258" /db_xref="GeneID:9514317" CDS complement(2370700..2371503) /locus_tag="Acear_2258" /note="COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: hor:Hore_20260 beta-lactamase domain protein; SPTR: B8CZR9 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily" /codon_start=1 /transl_table=11 /product="beta-lactamase domain protein" /protein_id="YP_003828808.1" /db_xref="GI:302392988" /db_xref="GeneID:9514317" /translation="MIKITLEVCSLASGSSGNSIYVATDKKKVLVDAGLSGKRVSERL AEINVDGSELDAILVTHEHGDHIKGVGILSRRFNLPIYATEKTWAAAKEDLGKIKPEY ICIINKEGLSLGDLELESFEIPHDAVDPVGFTLRNKNKKVSIATDIGYMTEEIMANLK ESNLVILESNHDLEMLKAGPYPWSLKKRIMSREGHLSNDDAAATVVELVKNSVERILL AHLSKDNNVPQLAHLTVKNMIVDAGMELGRDLQLDFAYRNEVSNLFQVG" misc_feature complement(2370748..2371497) /locus_tag="Acear_2258" /note="Metallo-beta-lactamase superfamily; Region: Lactamase_B; cl00446" /db_xref="CDD:193822" gene 2371618..2372391 /locus_tag="Acear_2259" /db_xref="GeneID:9514318" CDS 2371618..2372391 /locus_tag="Acear_2259" /EC_number="2.1.1.80" /note="COGs: COG1352 methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: hor:Hore_20280 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; PRIAM: protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; SPTR: B8CZS1 protein-glutamate O-methyltransferase; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain" /codon_start=1 /transl_table=11 /product="MCP methyltransferase, CheR-type" /protein_id="YP_003828809.1" /db_xref="GI:302392989" /db_xref="GeneID:9514318" /translation="MTLNFTEFRKRASRNINIDLSSYKTKRVKRRINSLMDKNDIKDY NECLDLLKTDKDFKKEFLDHFTINTSEFFRNPKNFNYLKEEVFPELFEHNNKVKIWSA ACSDGSEPYTLAIILNELGINPRRFEILATDIDHQILKTAKKGIYNENSVKKTETAIL NKYFTEQNDRYVLDPKIKNKVNFKQHNLLTDSYRSKWNLILCRNVFIYFTKETKKKIT QKLSNALIKDGFLFLGNTEYLLKPDSYGLTKEYTSFYRR" misc_feature 2371630..2372388 /locus_tag="Acear_2259" /note="Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]; Region: CheR; COG1352" /db_xref="CDD:31543" misc_feature 2371630..>2371755 /locus_tag="Acear_2259" /note="CheR methyltransferase, all-alpha domain; Region: CheR_N; pfam03705" /db_xref="CDD:112515" misc_feature 2371819..2372340 /locus_tag="Acear_2259" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)...; Region: AdoMet_MTases; cl12011" /db_xref="CDD:196296" gene complement(2372402..2374222) /locus_tag="Acear_2260" /db_xref="GeneID:9514319" CDS complement(2372402..2374222) /locus_tag="Acear_2260" /note="COGs: COG2262 GTPase; InterPro IPR006073:IPR002917:IPR016496:IPR005225; KEGG: cce:Ccel_0178 GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; SPTR: A1HMU1 Small GTP-binding protein; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain" /codon_start=1 /transl_table=11 /product="GTP-binding proten HflX" /protein_id="YP_003828810.1" /db_xref="GI:302392990" /db_xref="GeneID:9514319" /translation="MVLITDLRGDLSGIKDRYIEELEMMSSSIFSSGELVAIDFLYQI INIASEIEDKIAVLINRRGEVLRIKVGELTNDFFAGAKQRRSVKRLSGLRCIYLTFNS QLNRKNKIFLKEYRLDLLVHLSLADRQSKLEALVHYPKVDNGQLVVGSELKGPFSLTE LTETDYSTEIEDIEDKLQETETVKVTEAESEAAVLVCLITEDDTGYNQEEPLAELENL