LOCUS NC_014303 6951 bp DNA circular BCT 23-AUG-2010 DEFINITION Halalkalicoccus jeotgali B3 plasmid 6, complete sequence. ACCESSION NC_014303 VERSION NC_014303.1 GI:299883499 DBLINK Project: 50305 KEYWORDS . SOURCE Halalkalicoccus jeotgali B3 ORGANISM Halalkalicoccus jeotgali B3 Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus. REFERENCE 1 (bases 1 to 6951) AUTHORS Roh,S.W., Nam,Y.D., Nam,S.H., Choi,S.H., Park,H.S. and Bae,J.W. TITLE Complete genome sequence of Halalkalicoccus jeotgali B3(T), an extremely halophilic archaeon JOURNAL J. Bacteriol. 192 (17), 4528-4529 (2010) PUBMED 20601480 REFERENCE 2 (bases 1 to 6951) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (30-JUN-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 6951) AUTHORS Roh,S.W., Nam,Y.-D., Nam,S.-H., Choi,S.-H., Park,H.-S. and Bae,J.-W. TITLE Direct Submission JOURNAL Submitted (07-JUN-2010) Department of Biology, Kyung Hee University, HoeGi-Dong 1, DongDaeMun-Gu, Seoul 130-701, Republic of Korea, Seoul, Seoul 130-701, Republic of Korea COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002068. This archaeon was isolated in our laboratory, followed by depositing this isolate into four culture collections (see the ref, IJSEM 2007, 57(10):2296-2298). Genome was manually curated based on annotation generated by the NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group. Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..6951 /organism="Halalkalicoccus jeotgali B3" /mol_type="genomic DNA" /strain="B3" /culture_collection="CECT:7217" /culture_collection="DSMZ:DSM 18796" /culture_collection="JCM:14584" /culture_collection="KCTC:4019" /db_xref="taxon:795797" /plasmid="6" /note="type strain of Halalkalicoccus jeotgali" gene join(6663..6951,1..503) /locus_tag="HacjB3_19618" /db_xref="GeneID:9385835" CDS join(6663..6951,1..503) /locus_tag="HacjB3_19618" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003739050.1" /db_xref="GI:299883507" /db_xref="GeneID:9385835" /translation="MTKPDETDADAANSAETNGATDMDDNADPNETSFVGTDVLTVAK DAVKAKRGHGGISEVIRDAINREAFGEQLNRRGQLEARREELVEKRAERREELREVTN RLEGEIDALGDEIDTLDTKLNSLTTREERYEAKLESLEYWLRVKGMRFDPGNGRLKEV AASAGREPEGVIQDLKLRNPDVPDVAFGDGDPGDTYNPPDSNQTALKSTESTGGDGEI TPLRDREEIYREREPATETEPGTEPELIGDGSGDTQDNRPNNPDE" misc_feature 15..>257 /locus_tag="HacjB3_19618" /note="V-type ATP synthase subunit I; Validated; Region: PRK05771" /db_xref="CDD:180249" gene 2173..2907 /locus_tag="HacjB3_19623" /db_xref="GeneID:9385828" CDS 2173..2907 /locus_tag="HacjB3_19623" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003739051.1" /db_xref="GI:299883500" /db_xref="GeneID:9385828" /translation="MATNMRYLNGSNTDESSITTNATPNASVVVRRTPDEMDANRGRE RHPDAPRPPGNHPTAVRGLDPETGRAVWIDFGEDGGAEIVGPVVLPDGTLPDREPGAV GNRESAATATEPDRESPPGAIETAIGSDRLATLASVNPGRLGKLAGLDIGADRDTEAN TEPDRESPTTESHRRASPVTGTLTALSPVKGVGSTDDTDANTESDTESNEDTERVGPD RVGAPTLAAYREAHADAESTDGEGDR" gene 2904..3368 /locus_tag="HacjB3_19628" /db_xref="GeneID:9385829" CDS 2904..3368 /locus_tag="HacjB3_19628" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003739052.1" /db_xref="GI:299883501" /db_xref="GeneID:9385829" /translation="MSASARRHTDAELLRYAAQVSSEHGEPFSASSMAPKTDLSTDDL ADQLLALSLDYETPASRRGKRDSYLPLRSVRVAGERVWFLAPPDEIERTDRLTGVRQA AILHKGDDLRVGSLNTQSLHGNRAWEPDRGDRRATELLAEHAPEWWREAADE" gene 3579..3860 /locus_tag="HacjB3_19633" /db_xref="GeneID:9385830" CDS 3579..3860 /locus_tag="HacjB3_19633" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003739053.1" /db_xref="GI:299883502" /db_xref="GeneID:9385830" /translation="MTTHDIDISDDTSGKDAEISDIVSGIETCDRMIEMAESRLNGRI RNAEHERIRIQYIKAISTHLRTKRSYLKDRELEEMAETVADLEREIGRP" gene 3857..4156 /locus_tag="HacjB3_19638" /db_xref="GeneID:9385831" CDS 3857..4156 /locus_tag="HacjB3_19638" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003739054.1" /db_xref="GI:299883503" /db_xref="GeneID:9385831" /translation="MSRDDREDLRRRIEELRDRAGERPDLIEALGIERAAEWWFDPDT QKRMIQSSLGGSQRPQAVVTTSEGEEYRADLIALWTGVVSSQDPDEIIEETEASG" gene complement(5172..5414) /locus_tag="HacjB3_19643" /db_xref="GeneID:9385832" CDS complement(5172..5414) /locus_tag="HacjB3_19643" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003739055.1" /db_xref="GI:299883504" /db_xref="GeneID:9385832" /translation="MLQDLSIFFEFSELAVHCLPSAADLIGHLLRGLRSRHSIPSPED TENPFFSDLFSVPAVFGSLAFHGWMYSSLLYIPVAH" gene 5584..5895 /locus_tag="HacjB3_19648" /db_xref="GeneID:9385833" CDS 5584..5895 /locus_tag="HacjB3_19648" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003739056.1" /db_xref="GI:299883505" /db_xref="GeneID:9385833" /translation="MQSITIKLSSETIDSLNSIAEAEHDGNRSDAVRELLSKGMDYDA LEARHKEAQQQLRAVNARQEDVGELVEHVERERELQQRERERRDAPIWQRAKWWVLGR S" misc_feature 5587..>5721 /locus_tag="HacjB3_19648" /note="nickel-responsive transcriptional regulator NikR; Region: nikR; TIGR02793" /db_xref="CDD:131840" gene complement(5995..6138) /locus_tag="HacjB3_19653" /db_xref="GeneID:9385834" CDS complement(5995..6138) /locus_tag="HacjB3_19653" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003739057.1" /db_xref="GI:299883506" /db_xref="GeneID:9385834" /translation="MNVINNYAWFPGPMEREQYWLENIYYVVRIVYVVILIAGTLSVL GGV" ORIGIN 1 tgcgcgaagt gacgaaccgg cttgaggggg agatcgacgc cctcggggac gagatcgaca 61 ccctcgacac caagctcaac agtctcacga cccgcgagga acggtatgaa gccaagctcg 121 aatcgctcga atactggtta cgggtcaagg ggatgcgatt cgaccccggt aacgggagac 181 tcaaagaggt ggccgcgagc gccgggcggg aaccggaagg tgtcatacag gaccttaagc 241 tccggaatcc agatgtgccg gatgtggcct tcggcgacgg ggatcccgga gacacctaca 301 atccaccgga cagtaatcag acggcgctca aatccaccga gagtaccggc ggggacggcg 361 agataacccc gcttcgggac cgagaggaga tttaccggga gcgagagccc gcgacagaga 421 cggagccggg gacggagccg gagctgatag gcgacggctc cggcgacact caggacaacc 481 gaccgaacaa ccccgacgag tgagttaaca acttacttct cagcgttatt aaccagatct 541 agaagtggtg ccgacggtct acccaaatac aaatttgtat ttccaaaccc aaatttgtat 601 ttggtcgtct agtagtagtg tagtagtagt gtagtagtag tagtagtagt agtagtagta 661 gtagtagtag tagtagtagc gtagctgtag cggccgttaa cagcggttgc gtcggtctga 721 gaaaggtggt tcggacgggg gtgctcctgt cggtggtttg tcgcgtcggg ctgatctacc 781 gaatacaaat ttgcgttcgg accgttcctg ttgcttcccc ggggtcgtgt tgccgccggt 841 aggacggatt tatcctgtcg gtggtttgtc gcgtcgggct gatcctgttg ctcgcgtccg 901 gtcgaaacgg gtggttcgtt cgtttcggtc ctgttggatc gaacgggaca ggttggggct 961 gacgtgactc ggacggatcg acaccggcgc gtgggtggac tgaccacccg aacccccggg 1021 gtagcgtgag cagatccctg ttgctccccg tctccctcag tcctgttcag tactgtctgt 1081 cctctctgcc ctgtcctgtc cttcccctct ctgtcctccc tctctcagtc cgtcgctgtg 1141 gtctctctga gcctatcaca tagccctctc tggggactct cctctctgta aggggtttaa 1201 ccctactcaa ccatcgtctc cccgtgagag gcgtctcacg cacagctatt gcacacacct 1261 gtacatcctt gcgtgtgcaa ggtgggctcg agatttgcag ggatcgctgt tatcactctt 1321 tcttgccgga gtagttcgta tcggattaag gatacgtcgg aggtatcggt tggatgacac 1381 aggccgcagt ctatcgattc gtgtttcggg ggatcgcctg agtcacggat ctacttttga 1441 ttagtgcagt aatcaaaagt ggattggccg tcagccgcag aggcgctgtg tgcgttcctg 1501 agcaccgtcg tctctccgag tgctatacta ctcgtttcgt cgcccggcca cgccagcggc 1561 gcgctgtggc ttcggggctg agccacggcg ctatgccagc cacgcgagcc acggagcgct 1621 gacaccgggc ggtgtcggcc cgtggccggt ccggccacgc ggtcggtggc cggccacccc 1681 gcctgctcat gtcagcgagt ctatacacgc gcgcagtctg tcagcgccct gtcacgccgc 1741 aggctcccct atctcaccac taatactata taaggcaaga ttcaatccta tttaaagtat 1801 cgaaagactt atacgttaga atcccttaga gacgcgtagg tgccgcgcgc tccgccctcc 1861 cctccccgcg ctggccgctg gcgatcagcc acggccagcc gacagatctg gtccacaggg 1921 gcctcgattt ggtccgtcat agattcgggg tcgggcgcgc gacaccgacc tgtctgcgcg 1981 aatcagacat ccgtgtgttc agttccggtg cgcgcgtggg tttgggagac cacccgcgcc 2041 gggatcagtg cttacatcga gcaacatcag gttcgtctcg gcgacctgtg acatttggga 2101 acgtcaagtt tccaccccat cttttgaacg aatgactaac tctactctac tctatctgga 2161 taggtcatgc aaatggccac caatatgcga tatctgaacg gatcgaacac ggacgaatcg 2221 agcataacca cgaacgcgac cccgaacgcg tcggtcgtcg tccgtcggac cccggatgag 2281 atggacgcga accggggacg cgagcgccac ccggacgcgc cacgtccccc ggggaaccac 2341 ccgacggcag tccgcgggct cgatccagag acggggcggg cggtgtggat cgacttcggc 2401 gaggacggtg gcgccgagat cgtcggtccg gtggtcctcc cggatggcac acttccggac 2461 cgagagccgg gagcggtcgg caaccgagag agcgcggcca cggccacgga gcccgaccgg 2521 gagagcccgc ccggagcgat cgaaacggcg atcgggagcg accgactcgc cacgctcgcg 2581 agcgtcaacc ccggccgact cggcaagctg gcggggctcg atatcggcgc cgaccgcgac 2641 accgaagcca acaccgaacc cgaccgggag agcccgacaa ctgagagcca ccggcgggcg 2701 tcgcctgtca cggggacgct gaccgctctc tcccccgtga agggcgtcgg gagcacggac 2761 gacaccgacg cgaacacgga gagcgacacc gagagcaacg aggacaccga gcgggtcggt 2821 ccggatcggg tcggggcgcc gacgctggcg gcctatcgtg aggctcacgc cgacgctgag 2881 agcacggacg gggagggcga ccgatgagtg cgagcgcccg ccgtcacacc gacgccgaac 2941 tactccgata cgcggctcag gtgtcgagcg aacacggtga gccattcagc gcctcgtcga 3001 tggcgccgaa gacggacctc tcgacggacg acctcgcgga ccagctgctc gccctctcac 3061 tggattatga gacgccggcc tcgcggcgag gaaaacgaga ttcgtacctc cccttacgga 3121 gcgtccgggt cgctggcgag agagtgtggt tcctcgcccc tccggatgag atcgagcgca 3181 cggaccgcct gacgggcgtt agacaggcgg cgatcctgca caagggcgac gacctccggg 3241 ttggctcact caacacgcag tcgctccacg gcaaccgtgc atgggagccg gaccgggggg 3301 accgtcgggc cacggaactg ctggccgagc acgcccctga gtggtggcga gaggccgccg 3361 acgaatgacc gccacgtaag cgacactcag accgccatat cggccccatt tcaccccgtg 3421 acgcttcggc cctccatcca cgccgtaaca cccccgaccg ccgcagagac ctccttgcac 3481 gcaaatccgg gactaagagc cgattcgacg tttttccaga aaccccccga gaacggcgtg 3541 ttcggcacgc cgggacgctc tcaggcaaaa aacaactcat gacaacacac gatatagaca 3601 tttcagacga tacgagcggc aaagacgcgg aaatatcgga tattgtaagc ggcatcgaaa 3661 cgtgcgatcg aatgatagag atggcagagt cgcgattaaa cgggagaata aggaacgcgg 3721 agcacgaacg tatccggatt cagtacatca aagcgataag tacccatctc cggacaaaac 3781 ggagttatct gaaagatcgc gaattagagg agatggccga aacggtggcc gacctcgaaa 3841 gggagatcgg ccggccatga gccgtgacga ccgggaggac ttacgccggc ggatcgagga 3901 gcttcgggat cgggctggcg agaggccgga cctgatagaa gcgctgggga tcgagcgggc 3961 ggcggagtgg tggtttgatc cggacacgca gaagcgaatg atccagtcgt cgctgggcgg 4021 ctcacagcgg cctcaggcgg tcgtaacgac ctccgagggc gaggagtacc gcgccgacct 4081 gatcgcactg tggacgggcg tggtgtcctc tcaggacccg gatgagatta tcgaggagac 4141 ggaggccagc ggatgagtca gccacggtgt ccgcgtggcg acgactgtgt gggcgacggc 4201 catgtgtccc gtgactggcg acgcgtgttt ggcgatcgcc cgtgtttgga ctgttcggga 4261 gcgggctggc ggatcgataa gagcgacttc ggggggatcg acgacctgag gccagctgac 4321 gccgacggcg gactgccgtc gggccgtggt cggtccgacc acgatgccga cgcggacacc 4381 ccgcaatggg gtgccgagta gtggggtcac gtcggcgtgt ggtctgtgga ttcgcgggat 4441 ttcatggggt tgcgtggagc ccctgacaca acgtgaacac ccctggaagg gacccaacga 4501 cgtgatcgac gctggtcccg ggggtgcgac tggttctcag gatccactga cacatcaatt 4561 aatcggtcgc tgaggacgac ggcgagcgta acacgattga ggaacgagcg ggtggagcgg 4621 tccggggtat tgggccgccc accgactcag tggaaccgtg ggaactcgcg ggaccgtccc 4681 gctaagcgtg cacactccct cacaggccat ccaccttccg ggtgtgtgca aatgagactc 4741 aatgccacag ggacttattt gtagtgcatt ggagattgcg acgatgccgc cgccggaggt 4801 cttgggtgga tggacccccg tcagcagaca gtagagtcca tgtacagact cgcgctgcct 4861 tcttgtgaca acacaatttt cctcacgcgg ttcggtaccg cgggtcggaa cgagtcgcac 4921 gcccccggga gcagtacggg gtgtgcgtct gctacgtagt gccacgacaa cttatcgata 4981 acggtggcgg atagaagcga cgtgagcgcc tgtgattcgg gctcgacgtg tcgatatctt 5041 ctttcgtgtt cgcttgtttc gtggacatgg gttcttgatc tgagacccac ccgctcgcct 5101 gtgcaaccag gcgggcgacc attcataccg tcctcaatcg ccccgaagag cgggtgtgtc 5161 tctacctatt gctaatgagc aacaggtata tatagtagag aggagtacat ccatccatgg 5221 aacgcgagcg agccgaaaac ggccggtacg ctgaacaggt cactgaagaa cgggttctcg 5281 gtgtcctcgg gagaggggat ggagtgacga gaccgcaatc cgcgaagcag gtggccgata 5341 agatcggctg cactcggcaa gcagtggacc gcaagctccg agaactcgaa aaagatggaa 5401 aggtcctgaa gcatgagctc ggatcgagga gtgtggcgtg gacgccccga aggatgctcc 5461 gtcggggctg agtgagttcg tgcatcagtc agctgtctaa aatctccagt cgaaatcagt 5521 cgtacaggag tctgacggct ggctgacggt gttacttggt actacgatcg taacacaccg 5581 gtaatgcaga gcattacgat caaattatcc agtgagacga ttgactcact caacagcatc 5641 gcggaggctg agcacgacgg aaaccgctca gacgctgtac gggagttact gagtaagggt 5701 atggactatg acgcgctcga agctcggcac aaggaggctc agcagcagct ccgtgcggtc 5761 aatgccagac aggaggatgt gggcgagctt gttgagcacg ttgagcgcga gcgtgagtta 5821 cagcagcggg agcgtgagcg ccgagatgcc ccgatttggc aacgagcgaa gtggtgggtg 5881 cttggacgct cttgactttt cttcggcagt cttaacaggg cgtgggctca acactcaatc 5941 gttgactacc agggtcggcc tctggatgag tgtccgaggc cgtatcccgt gctgctatac 6001 tccccccagt accgacagcg tccccgcgat cagaatcacg acatagacga tccggacgac 6061 atagtaaata ttctcaagcc aatactgctc tcgttccatc ggacctggaa accaggcgta 6121 gttgttgatg acgttcatac gcgtagctga ttgaatgagg cccagaatcc gacgcggttg 6181 ttgactacca gagtcggcct ctggggcctc cacatcaacc cgataccctc caccgggaaa 6241 cacccaccga tccggttcgt ttcctctctt attatatgta acccggcatg caaatgctat 6301 gttgccagta gattaatata gagcccggca ctgccgtacc cggttagtat agcagttcca 6361 agcttgttga taggaccgac agcattaccg agccgggcga ggtgattcgg acgcgatcgc 6421 gtggcgagcg ccgacgccag tacctacgcg aggatttatc cgggcgcact ggcaagcgta 6481 gctaaagcta tggaatagat gacagcgacg gggtggtacc aagcaccccg ccaacagcaa 6541 agtatagctc cctcctacgg agcacacacc tgacttgggt gtgttccgtt ctacggcgcc 6601 gggtcgtatg agtcttccgg gttcggggac aagaggcgag atattttcat cgacacggaa 6661 gaatgacgaa accagacgaa acggatgcag acgcggcgaa cagcgcggaa acgaacggag 6721 cgacggatat ggacgacaat gccgacccga acgaaacctc attcgtcggg acggatgtgc 6781 tcactgtcgc caaggacgcc gttaaggcta agcgcggcca cggtggcata tccgaggtga 6841 tccgggacgc gatcaaccgc gaggcgttcg gggagcaact gaaccgacgc ggccagctcg 6901 aagcgcgccg agaggaactt gtcgaaaagc gcgccgagcg tcgcgaggaa c //