LOCUS       NC_014303               6951 bp    DNA     circular BCT 23-AUG-2010
DEFINITION  Halalkalicoccus jeotgali B3 plasmid 6, complete sequence.
ACCESSION   NC_014303
VERSION     NC_014303.1  GI:299883499
DBLINK      Project: 50305
KEYWORDS    .
SOURCE      Halalkalicoccus jeotgali B3
  ORGANISM  Halalkalicoccus jeotgali B3
            Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
            Halobacteriaceae; Halalkalicoccus.
REFERENCE   1  (bases 1 to 6951)
  AUTHORS   Roh,S.W., Nam,Y.D., Nam,S.H., Choi,S.H., Park,H.S. and Bae,J.W.
  TITLE     Complete genome sequence of Halalkalicoccus jeotgali B3(T), an
            extremely halophilic archaeon
  JOURNAL   J. Bacteriol. 192 (17), 4528-4529 (2010)
   PUBMED   20601480
REFERENCE   2  (bases 1 to 6951)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUN-2010) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 6951)
  AUTHORS   Roh,S.W., Nam,Y.-D., Nam,S.-H., Choi,S.-H., Park,H.-S. and
            Bae,J.-W.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUN-2010) Department of Biology, Kyung Hee
            University, HoeGi-Dong 1, DongDaeMun-Gu, Seoul 130-701, Republic of
            Korea, Seoul, Seoul 130-701, Republic of Korea
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to CP002068.
            This archaeon was isolated in our laboratory, followed by
            depositing this isolate into four culture collections (see the ref,
            IJSEM 2007, 57(10):2296-2298).
            Genome was manually curated based on annotation generated by the
            NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group.
            Information about the Pipeline can be found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..6951
                     /organism="Halalkalicoccus jeotgali B3"
                     /mol_type="genomic DNA"
                     /strain="B3"
                     /culture_collection="CECT:7217"
                     /culture_collection="DSMZ:DSM 18796"
                     /culture_collection="JCM:14584"
                     /culture_collection="KCTC:4019"
                     /db_xref="taxon:795797"
                     /plasmid="6"
                     /note="type strain of Halalkalicoccus jeotgali"
     gene            join(6663..6951,1..503)
                     /locus_tag="HacjB3_19618"
                     /db_xref="GeneID:9385835"
     CDS             join(6663..6951,1..503)
                     /locus_tag="HacjB3_19618"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_003739050.1"
                     /db_xref="GI:299883507"
                     /db_xref="GeneID:9385835"
                     /translation="MTKPDETDADAANSAETNGATDMDDNADPNETSFVGTDVLTVAK
                     DAVKAKRGHGGISEVIRDAINREAFGEQLNRRGQLEARREELVEKRAERREELREVTN
                     RLEGEIDALGDEIDTLDTKLNSLTTREERYEAKLESLEYWLRVKGMRFDPGNGRLKEV
                     AASAGREPEGVIQDLKLRNPDVPDVAFGDGDPGDTYNPPDSNQTALKSTESTGGDGEI
                     TPLRDREEIYREREPATETEPGTEPELIGDGSGDTQDNRPNNPDE"
     misc_feature    15..>257
                     /locus_tag="HacjB3_19618"
                     /note="V-type ATP synthase subunit I; Validated; Region:
                     PRK05771"
                     /db_xref="CDD:180249"
     gene            2173..2907
                     /locus_tag="HacjB3_19623"
                     /db_xref="GeneID:9385828"
     CDS             2173..2907
                     /locus_tag="HacjB3_19623"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_003739051.1"
                     /db_xref="GI:299883500"
                     /db_xref="GeneID:9385828"
                     /translation="MATNMRYLNGSNTDESSITTNATPNASVVVRRTPDEMDANRGRE
                     RHPDAPRPPGNHPTAVRGLDPETGRAVWIDFGEDGGAEIVGPVVLPDGTLPDREPGAV
                     GNRESAATATEPDRESPPGAIETAIGSDRLATLASVNPGRLGKLAGLDIGADRDTEAN
                     TEPDRESPTTESHRRASPVTGTLTALSPVKGVGSTDDTDANTESDTESNEDTERVGPD
                     RVGAPTLAAYREAHADAESTDGEGDR"
     gene            2904..3368
                     /locus_tag="HacjB3_19628"
                     /db_xref="GeneID:9385829"
     CDS             2904..3368
                     /locus_tag="HacjB3_19628"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_003739052.1"
                     /db_xref="GI:299883501"
                     /db_xref="GeneID:9385829"
                     /translation="MSASARRHTDAELLRYAAQVSSEHGEPFSASSMAPKTDLSTDDL
                     ADQLLALSLDYETPASRRGKRDSYLPLRSVRVAGERVWFLAPPDEIERTDRLTGVRQA
                     AILHKGDDLRVGSLNTQSLHGNRAWEPDRGDRRATELLAEHAPEWWREAADE"
     gene            3579..3860
                     /locus_tag="HacjB3_19633"
                     /db_xref="GeneID:9385830"
     CDS             3579..3860
                     /locus_tag="HacjB3_19633"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_003739053.1"
                     /db_xref="GI:299883502"
                     /db_xref="GeneID:9385830"
                     /translation="MTTHDIDISDDTSGKDAEISDIVSGIETCDRMIEMAESRLNGRI
                     RNAEHERIRIQYIKAISTHLRTKRSYLKDRELEEMAETVADLEREIGRP"
     gene            3857..4156
                     /locus_tag="HacjB3_19638"
                     /db_xref="GeneID:9385831"
     CDS             3857..4156
                     /locus_tag="HacjB3_19638"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_003739054.1"
                     /db_xref="GI:299883503"
                     /db_xref="GeneID:9385831"
                     /translation="MSRDDREDLRRRIEELRDRAGERPDLIEALGIERAAEWWFDPDT
                     QKRMIQSSLGGSQRPQAVVTTSEGEEYRADLIALWTGVVSSQDPDEIIEETEASG"
     gene            complement(5172..5414)
                     /locus_tag="HacjB3_19643"
                     /db_xref="GeneID:9385832"
     CDS             complement(5172..5414)
                     /locus_tag="HacjB3_19643"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_003739055.1"
                     /db_xref="GI:299883504"
                     /db_xref="GeneID:9385832"
                     /translation="MLQDLSIFFEFSELAVHCLPSAADLIGHLLRGLRSRHSIPSPED
                     TENPFFSDLFSVPAVFGSLAFHGWMYSSLLYIPVAH"
     gene            5584..5895
                     /locus_tag="HacjB3_19648"
                     /db_xref="GeneID:9385833"
     CDS             5584..5895
                     /locus_tag="HacjB3_19648"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_003739056.1"
                     /db_xref="GI:299883505"
                     /db_xref="GeneID:9385833"
                     /translation="MQSITIKLSSETIDSLNSIAEAEHDGNRSDAVRELLSKGMDYDA
                     LEARHKEAQQQLRAVNARQEDVGELVEHVERERELQQRERERRDAPIWQRAKWWVLGR
                     S"
     misc_feature    5587..>5721
                     /locus_tag="HacjB3_19648"
                     /note="nickel-responsive transcriptional regulator NikR;
                     Region: nikR; TIGR02793"
                     /db_xref="CDD:131840"
     gene            complement(5995..6138)
                     /locus_tag="HacjB3_19653"
                     /db_xref="GeneID:9385834"
     CDS             complement(5995..6138)
                     /locus_tag="HacjB3_19653"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_003739057.1"
                     /db_xref="GI:299883506"
                     /db_xref="GeneID:9385834"
                     /translation="MNVINNYAWFPGPMEREQYWLENIYYVVRIVYVVILIAGTLSVL
                     GGV"
ORIGIN      
        1 tgcgcgaagt gacgaaccgg cttgaggggg agatcgacgc cctcggggac gagatcgaca
       61 ccctcgacac caagctcaac agtctcacga cccgcgagga acggtatgaa gccaagctcg
      121 aatcgctcga atactggtta cgggtcaagg ggatgcgatt cgaccccggt aacgggagac
      181 tcaaagaggt ggccgcgagc gccgggcggg aaccggaagg tgtcatacag gaccttaagc
      241 tccggaatcc agatgtgccg gatgtggcct tcggcgacgg ggatcccgga gacacctaca
      301 atccaccgga cagtaatcag acggcgctca aatccaccga gagtaccggc ggggacggcg
      361 agataacccc gcttcgggac cgagaggaga tttaccggga gcgagagccc gcgacagaga
      421 cggagccggg gacggagccg gagctgatag gcgacggctc cggcgacact caggacaacc
      481 gaccgaacaa ccccgacgag tgagttaaca acttacttct cagcgttatt aaccagatct
      541 agaagtggtg ccgacggtct acccaaatac aaatttgtat ttccaaaccc aaatttgtat
      601 ttggtcgtct agtagtagtg tagtagtagt gtagtagtag tagtagtagt agtagtagta
      661 gtagtagtag tagtagtagc gtagctgtag cggccgttaa cagcggttgc gtcggtctga
      721 gaaaggtggt tcggacgggg gtgctcctgt cggtggtttg tcgcgtcggg ctgatctacc
      781 gaatacaaat ttgcgttcgg accgttcctg ttgcttcccc ggggtcgtgt tgccgccggt
      841 aggacggatt tatcctgtcg gtggtttgtc gcgtcgggct gatcctgttg ctcgcgtccg
      901 gtcgaaacgg gtggttcgtt cgtttcggtc ctgttggatc gaacgggaca ggttggggct
      961 gacgtgactc ggacggatcg acaccggcgc gtgggtggac tgaccacccg aacccccggg
     1021 gtagcgtgag cagatccctg ttgctccccg tctccctcag tcctgttcag tactgtctgt
     1081 cctctctgcc ctgtcctgtc cttcccctct ctgtcctccc tctctcagtc cgtcgctgtg
     1141 gtctctctga gcctatcaca tagccctctc tggggactct cctctctgta aggggtttaa
     1201 ccctactcaa ccatcgtctc cccgtgagag gcgtctcacg cacagctatt gcacacacct
     1261 gtacatcctt gcgtgtgcaa ggtgggctcg agatttgcag ggatcgctgt tatcactctt
     1321 tcttgccgga gtagttcgta tcggattaag gatacgtcgg aggtatcggt tggatgacac
     1381 aggccgcagt ctatcgattc gtgtttcggg ggatcgcctg agtcacggat ctacttttga
     1441 ttagtgcagt aatcaaaagt ggattggccg tcagccgcag aggcgctgtg tgcgttcctg
     1501 agcaccgtcg tctctccgag tgctatacta ctcgtttcgt cgcccggcca cgccagcggc
     1561 gcgctgtggc ttcggggctg agccacggcg ctatgccagc cacgcgagcc acggagcgct
     1621 gacaccgggc ggtgtcggcc cgtggccggt ccggccacgc ggtcggtggc cggccacccc
     1681 gcctgctcat gtcagcgagt ctatacacgc gcgcagtctg tcagcgccct gtcacgccgc
     1741 aggctcccct atctcaccac taatactata taaggcaaga ttcaatccta tttaaagtat
     1801 cgaaagactt atacgttaga atcccttaga gacgcgtagg tgccgcgcgc tccgccctcc
     1861 cctccccgcg ctggccgctg gcgatcagcc acggccagcc gacagatctg gtccacaggg
     1921 gcctcgattt ggtccgtcat agattcgggg tcgggcgcgc gacaccgacc tgtctgcgcg
     1981 aatcagacat ccgtgtgttc agttccggtg cgcgcgtggg tttgggagac cacccgcgcc
     2041 gggatcagtg cttacatcga gcaacatcag gttcgtctcg gcgacctgtg acatttggga
     2101 acgtcaagtt tccaccccat cttttgaacg aatgactaac tctactctac tctatctgga
     2161 taggtcatgc aaatggccac caatatgcga tatctgaacg gatcgaacac ggacgaatcg
     2221 agcataacca cgaacgcgac cccgaacgcg tcggtcgtcg tccgtcggac cccggatgag
     2281 atggacgcga accggggacg cgagcgccac ccggacgcgc cacgtccccc ggggaaccac
     2341 ccgacggcag tccgcgggct cgatccagag acggggcggg cggtgtggat cgacttcggc
     2401 gaggacggtg gcgccgagat cgtcggtccg gtggtcctcc cggatggcac acttccggac
     2461 cgagagccgg gagcggtcgg caaccgagag agcgcggcca cggccacgga gcccgaccgg
     2521 gagagcccgc ccggagcgat cgaaacggcg atcgggagcg accgactcgc cacgctcgcg
     2581 agcgtcaacc ccggccgact cggcaagctg gcggggctcg atatcggcgc cgaccgcgac
     2641 accgaagcca acaccgaacc cgaccgggag agcccgacaa ctgagagcca ccggcgggcg
     2701 tcgcctgtca cggggacgct gaccgctctc tcccccgtga agggcgtcgg gagcacggac
     2761 gacaccgacg cgaacacgga gagcgacacc gagagcaacg aggacaccga gcgggtcggt
     2821 ccggatcggg tcggggcgcc gacgctggcg gcctatcgtg aggctcacgc cgacgctgag
     2881 agcacggacg gggagggcga ccgatgagtg cgagcgcccg ccgtcacacc gacgccgaac
     2941 tactccgata cgcggctcag gtgtcgagcg aacacggtga gccattcagc gcctcgtcga
     3001 tggcgccgaa gacggacctc tcgacggacg acctcgcgga ccagctgctc gccctctcac
     3061 tggattatga gacgccggcc tcgcggcgag gaaaacgaga ttcgtacctc cccttacgga
     3121 gcgtccgggt cgctggcgag agagtgtggt tcctcgcccc tccggatgag atcgagcgca
     3181 cggaccgcct gacgggcgtt agacaggcgg cgatcctgca caagggcgac gacctccggg
     3241 ttggctcact caacacgcag tcgctccacg gcaaccgtgc atgggagccg gaccgggggg
     3301 accgtcgggc cacggaactg ctggccgagc acgcccctga gtggtggcga gaggccgccg
     3361 acgaatgacc gccacgtaag cgacactcag accgccatat cggccccatt tcaccccgtg
     3421 acgcttcggc cctccatcca cgccgtaaca cccccgaccg ccgcagagac ctccttgcac
     3481 gcaaatccgg gactaagagc cgattcgacg tttttccaga aaccccccga gaacggcgtg
     3541 ttcggcacgc cgggacgctc tcaggcaaaa aacaactcat gacaacacac gatatagaca
     3601 tttcagacga tacgagcggc aaagacgcgg aaatatcgga tattgtaagc ggcatcgaaa
     3661 cgtgcgatcg aatgatagag atggcagagt cgcgattaaa cgggagaata aggaacgcgg
     3721 agcacgaacg tatccggatt cagtacatca aagcgataag tacccatctc cggacaaaac
     3781 ggagttatct gaaagatcgc gaattagagg agatggccga aacggtggcc gacctcgaaa
     3841 gggagatcgg ccggccatga gccgtgacga ccgggaggac ttacgccggc ggatcgagga
     3901 gcttcgggat cgggctggcg agaggccgga cctgatagaa gcgctgggga tcgagcgggc
     3961 ggcggagtgg tggtttgatc cggacacgca gaagcgaatg atccagtcgt cgctgggcgg
     4021 ctcacagcgg cctcaggcgg tcgtaacgac ctccgagggc gaggagtacc gcgccgacct
     4081 gatcgcactg tggacgggcg tggtgtcctc tcaggacccg gatgagatta tcgaggagac
     4141 ggaggccagc ggatgagtca gccacggtgt ccgcgtggcg acgactgtgt gggcgacggc
     4201 catgtgtccc gtgactggcg acgcgtgttt ggcgatcgcc cgtgtttgga ctgttcggga
     4261 gcgggctggc ggatcgataa gagcgacttc ggggggatcg acgacctgag gccagctgac
     4321 gccgacggcg gactgccgtc gggccgtggt cggtccgacc acgatgccga cgcggacacc
     4381 ccgcaatggg gtgccgagta gtggggtcac gtcggcgtgt ggtctgtgga ttcgcgggat
     4441 ttcatggggt tgcgtggagc ccctgacaca acgtgaacac ccctggaagg gacccaacga
     4501 cgtgatcgac gctggtcccg ggggtgcgac tggttctcag gatccactga cacatcaatt
     4561 aatcggtcgc tgaggacgac ggcgagcgta acacgattga ggaacgagcg ggtggagcgg
     4621 tccggggtat tgggccgccc accgactcag tggaaccgtg ggaactcgcg ggaccgtccc
     4681 gctaagcgtg cacactccct cacaggccat ccaccttccg ggtgtgtgca aatgagactc
     4741 aatgccacag ggacttattt gtagtgcatt ggagattgcg acgatgccgc cgccggaggt
     4801 cttgggtgga tggacccccg tcagcagaca gtagagtcca tgtacagact cgcgctgcct
     4861 tcttgtgaca acacaatttt cctcacgcgg ttcggtaccg cgggtcggaa cgagtcgcac
     4921 gcccccggga gcagtacggg gtgtgcgtct gctacgtagt gccacgacaa cttatcgata
     4981 acggtggcgg atagaagcga cgtgagcgcc tgtgattcgg gctcgacgtg tcgatatctt
     5041 ctttcgtgtt cgcttgtttc gtggacatgg gttcttgatc tgagacccac ccgctcgcct
     5101 gtgcaaccag gcgggcgacc attcataccg tcctcaatcg ccccgaagag cgggtgtgtc
     5161 tctacctatt gctaatgagc aacaggtata tatagtagag aggagtacat ccatccatgg
     5221 aacgcgagcg agccgaaaac ggccggtacg ctgaacaggt cactgaagaa cgggttctcg
     5281 gtgtcctcgg gagaggggat ggagtgacga gaccgcaatc cgcgaagcag gtggccgata
     5341 agatcggctg cactcggcaa gcagtggacc gcaagctccg agaactcgaa aaagatggaa
     5401 aggtcctgaa gcatgagctc ggatcgagga gtgtggcgtg gacgccccga aggatgctcc
     5461 gtcggggctg agtgagttcg tgcatcagtc agctgtctaa aatctccagt cgaaatcagt
     5521 cgtacaggag tctgacggct ggctgacggt gttacttggt actacgatcg taacacaccg
     5581 gtaatgcaga gcattacgat caaattatcc agtgagacga ttgactcact caacagcatc
     5641 gcggaggctg agcacgacgg aaaccgctca gacgctgtac gggagttact gagtaagggt
     5701 atggactatg acgcgctcga agctcggcac aaggaggctc agcagcagct ccgtgcggtc
     5761 aatgccagac aggaggatgt gggcgagctt gttgagcacg ttgagcgcga gcgtgagtta
     5821 cagcagcggg agcgtgagcg ccgagatgcc ccgatttggc aacgagcgaa gtggtgggtg
     5881 cttggacgct cttgactttt cttcggcagt cttaacaggg cgtgggctca acactcaatc
     5941 gttgactacc agggtcggcc tctggatgag tgtccgaggc cgtatcccgt gctgctatac
     6001 tccccccagt accgacagcg tccccgcgat cagaatcacg acatagacga tccggacgac
     6061 atagtaaata ttctcaagcc aatactgctc tcgttccatc ggacctggaa accaggcgta
     6121 gttgttgatg acgttcatac gcgtagctga ttgaatgagg cccagaatcc gacgcggttg
     6181 ttgactacca gagtcggcct ctggggcctc cacatcaacc cgataccctc caccgggaaa
     6241 cacccaccga tccggttcgt ttcctctctt attatatgta acccggcatg caaatgctat
     6301 gttgccagta gattaatata gagcccggca ctgccgtacc cggttagtat agcagttcca
     6361 agcttgttga taggaccgac agcattaccg agccgggcga ggtgattcgg acgcgatcgc
     6421 gtggcgagcg ccgacgccag tacctacgcg aggatttatc cgggcgcact ggcaagcgta
     6481 gctaaagcta tggaatagat gacagcgacg gggtggtacc aagcaccccg ccaacagcaa
     6541 agtatagctc cctcctacgg agcacacacc tgacttgggt gtgttccgtt ctacggcgcc
     6601 gggtcgtatg agtcttccgg gttcggggac aagaggcgag atattttcat cgacacggaa
     6661 gaatgacgaa accagacgaa acggatgcag acgcggcgaa cagcgcggaa acgaacggag
     6721 cgacggatat ggacgacaat gccgacccga acgaaacctc attcgtcggg acggatgtgc
     6781 tcactgtcgc caaggacgcc gttaaggcta agcgcggcca cggtggcata tccgaggtga
     6841 tccgggacgc gatcaaccgc gaggcgttcg gggagcaact gaaccgacgc ggccagctcg
     6901 aagcgcgccg agaggaactt gtcgaaaagc gcgccgagcg tcgcgaggaa c
//
