LOCUS NC_013368 6673 bp DNA circular BCT 07-OCT-2009 DEFINITION Escherichia coli O111:H- str. 11128 plasmid pO111_5, complete sequence. ACCESSION NC_013368 VERSION NC_013368.1 GI:260751919 DBLINK Project:41023 KEYWORDS . SOURCE Escherichia coli O111:H- str. 11128 ORGANISM Escherichia coli O111:H- str. 11128 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. REFERENCE 1 AUTHORS Ogura,Y., Ooka,T., Iguchi,A., Toh,H., Asadulghani,M., Oshima,K., Kodama,T., Abe,H., Nakayama,K., Kurokawa,K., Tobe,T., Hattori,M. and Hayashi,T. TITLE Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli JOURNAL Proc. Natl. Acad. Sci. U.S.A. 106 (42), 17939-17944 (2009) PUBMED 19815525 REFERENCE 2 (bases 1 to 6673) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (07-OCT-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 6673) AUTHORS Hattori,M., Toh,H., Oshima,K., Yamashita,A., Hayashi,T., Ogura,Y. and Ooka,T. TITLE Direct Submission JOURNAL Submitted (21-DEC-2008) Contact:Masahira Hattori University of Tokyo, Graduate School of Frontier Sciences; 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8562, Japan URL :http://www.cb.k.u-tokyo.ac.jp/hattorilab/ COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..6673 /organism="Escherichia coli O111:H- str. 11128" /mol_type="genomic DNA" /strain="11128" /serovar="O111:H-" /db_xref="taxon:585396" /plasmid="pO111_5" /note="enteropathogenic Escherichia coli" gene 1..288 /locus_tag="ECO111_p5-01" /db_xref="GeneID:8470756" CDS 1..288 /locus_tag="ECO111_p5-01" /codon_start=1 /transl_table=11 /product="putative mobilization protein 1" /protein_id="YP_003237832.1" /db_xref="GI:260751920" /db_xref="GeneID:8470756" /translation="MSEVFTVIPEACEAAAVKLVSVVVKRFADVSLVVGVQFIQFFQQ GQRLAFDEAGHVKGGFFLFSHSSVSPCVGSLSEVFNDTGETRKDAHDTGHG" gene complement(4..195) /locus_tag="ECO111_p5-02" /db_xref="GeneID:8470747" CDS complement(4..195) /locus_tag="ECO111_p5-02" /codon_start=1 /transl_table=11 /product="RNA I inhibition modulator protein" /protein_id="YP_003237833.1" /db_xref="GI:260751921" /db_xref="GeneID:8470747" /translation="MTKQEKTALNMARFIKSQTLTLLEKLNELDADDQADICEALHDH ADELYRSCLARFGDDGENL" gene 239..586 /locus_tag="ECO111_p5-03" /db_xref="GeneID:8470748" CDS 239..586 /locus_tag="ECO111_p5-03" /codon_start=1 /transl_table=11 /product="putative mobilization protein 2" /protein_id="YP_003237834.1" /db_xref="GI:260751922" /db_xref="GeneID:8470748" /translation="MIPVKRERMLTIRVTDEEHARLLARCEGKQLASWMRKVCLGAPP SKTSGLPTLAPPLLRQFASVGNNLNQIARKINSGQWSGHDRVHVVAALMAIGRELSEL RDEVRKQGERDDS" gene 576..2174 /locus_tag="ECO111_p5-04" /db_xref="GeneID:8470749" CDS 576..2174 /locus_tag="ECO111_p5-04" /codon_start=1 /transl_table=11 /product="putative mobilization protein 3" /protein_id="YP_003237835.1" /db_xref="GI:260751923" /db_xref="GeneID:8470749" /translation="MIVKFHARGKGGGSGPVDYLLGRERSREGARVLRGAPEEVRELI DATPFAKKYTSGVLSFAEQTLPPGERERVMESFERVLMPGLEKNQYSILWVEHQDKGR LELNFVIPNMELASGKRLQPYYDRADRPRINAWQTLVNHHYGLHDPNAPENRRTLVTP NNLPKAKQEAAEAITRGVEALYHAGALKTRQDVTEALTAAGFEVVRTTRSSISIADPE GGRNLRLKGALYEQSFTNGDRLREETERACRLYREHAEQRVQEARSVCRQGTELKRAE NQRRYQRTHSSGERTTGDAEQCRERAVQRHRERTCPAAGRAALEAGQRADTVPVADGA LRHGRDFSGVMGVDSVAGKPYCGEHPGYQGPGRDAGETPGKNMGCDVSRGQEREISGV AVRGEGGKQLDGGEEERSKTGQGVSEYDRAGNALTERLRAIAAGLYAAAERLGERLHG FAAYVRADTTGERATEGTVRRLESAGAEISRAGGPLESVIYHEQQIRDEQERLARLER ERARSWHEEQEREVRVWRGPSMGM" gene 2202..2423 /locus_tag="ECO111_p5-05" /db_xref="GeneID:8470750" CDS 2202..2423 /locus_tag="ECO111_p5-05" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003237836.1" /db_xref="GI:260751924" /db_xref="GeneID:8470750" /translation="MVPERVKNESGRDSGVSFLLLCFASLPDRAHSSASSRDVCVCHQ LKRWKKNSVMRFTQAKPALFTWLNSYAYG" gene complement(2554..2799) /locus_tag="ECO111_p5-06" /db_xref="GeneID:8470751" CDS complement(2554..2799) /locus_tag="ECO111_p5-06" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003237837.1" /db_xref="GI:260751925" /db_xref="GeneID:8470751" /translation="MKRHRLTEAEERRLAEAIAAEARAMGLTKKDKMPQETKRRLRAR ILKAILDERTASKNREATLTAGQDPDDTFTWQPLRRR" gene 3063..5156 /locus_tag="ECO111_p5-07" /db_xref="GeneID:8470752" CDS 3063..5156 /locus_tag="ECO111_p5-07" /codon_start=1 /transl_table=11 /product="putative colicin activity protein" /protein_id="YP_003237838.1" /db_xref="GI:260751926" /db_xref="GeneID:8470752" /translation="MSDYEGSGPTEGIDYGHSMVVWPSTGLISGGDVKPGGSSGIAPS MPPGWGDYSPQGIALVQSVLFPGIIRRIILDKELEEGDWSGWSVSVHSPWGNEKVSAA RTVLENGLRGGLPEPSRPAAVSFARLEPASGNEQKIIRLMVTQQLEQVTDIPASQLPA AGNNVPVKYRLMDLMQNGTQYMAIIGGIPMTVPVVDAVPVPDRSRPGTNIKDVYSAPV SPNLPDLVLSVGQMNTPVLSNPEIQEEGVIAETGNYVEAGYTMSSNNHDVIVRFPEGS GVSPLYISTVEILDSNGLSQRQEAENKAKDDFRVKKEEAVARAEAEKAKAELFSKAGV NQPPVYTQEMMERANSVMNEQGALVLNNTASSVQLAMTGTGVWTAAGDIAGNISKFFS NALEKVTIPEVSPLLMRISLGALWFHSEEAGAGSDIVPGRNLEAMFSLSAQMLAGQGV VIEPGATSVNLPVRGQLINSNGQLALDLLKTGNESIPAAVPVLNAVRDTATGLDKITL PAVVGAPSRTILVNPVPQPSVPTDTGNHQPVPVTPVHTGTEVKPVEMPVTTITPVSDV GGLRDFIYWRPDAAGTGVEAVYVMLNEPLDSGRFSRKQLDKKYKHAGDFGISDTKKNR ETLTKFRDAIEEHLSDKDTVEKGTYRREKGSKVYFNPNTMNVVIIKSNGEFLSGWKIN PDADNGRIYLETGEL" gene 5153..5416 /locus_tag="ECO111_p5-08" /db_xref="GeneID:8470753" CDS 5153..5416 /locus_tag="ECO111_p5-08" /codon_start=1 /transl_table=11 /product="putative colicin immunity protein" /protein_id="YP_003237839.1" /db_xref="GI:260751927" /db_xref="GeneID:8470753" /translation="MNKMAMIDLAKLFLASKITAIEFSERICVERRRLYGVKDLSPNI LNCGEELFMAAERFEPDADRADYEIDDNGLKVEVRSILEKFKL" gene 5486..5632 /locus_tag="ECO111_p5-09" /db_xref="GeneID:8470754" CDS 5486..5632 /locus_tag="ECO111_p5-09" /codon_start=1 /transl_table=11 /product="putative colicin lysis protein" /protein_id="YP_003237840.1" /db_xref="GI:260751928" /db_xref="GeneID:8470754" /translation="MKKEIGGSMILVLAVLCLTACQANYVRDVQGGTIAPSSSSKLIG VAVQ" gene complement(5919..6179) /locus_tag="ECO111_p5-10" /db_xref="GeneID:8470755" CDS complement(5919..6179) /locus_tag="ECO111_p5-10" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003237841.1" /db_xref="GI:260751929" /db_xref="GeneID:8470755" /translation="MKSASGGETRRGLKIITVSGESLPPAPPRSRHIDYRIPFPPFSL AGHVALSHSSRLLVSRGDLGSSLRAGLYAGTPRSARLLHLLR" ORIGIN 1 gtgtcagagg ttttcaccgt catccccgaa gcgtgcgagg cagctgcggt aaagctcgtc 61 agcgtggtcg tgaagcgctt cgcagatgtc agcctggtcg tcggcgtcca gttcattcag 121 tttttccagc agggtcagcg tctggctttt gatgaagcgg gccatgttaa gggcggtttt 181 ttcctgttta gtcacagttc tgtttctcca tgtgtgggga gtctgtcgga ggtttttaat 241 gataccggtg aaacgcgaaa ggatgctcac gatacgggtc acggatgagg aacatgcgcg 301 gctgctggca cgttgtgagg gaaaacaact tgcgtcatgg atgcgtaagg tctgcctggg 361 ggcaccgcca tcgaaaacgt caggtcttcc gacactggca ccgccgctgt tgcgccagtt 421 cgcttcggtc ggcaataacc tgaatcagat agcccggaag ataaacagcg gacagtggtc 481 ggggcatgac cgggttcatg tggtggctgc actgatggcc atcggacgtg aactgagtga 541 gctgagggat gaggtccgta aacagggaga acgggatgat agttaagttt catgccaggg 601 gaaaaggcgg tggcagtggt ccggttgatt acctgctggg ccgggagcgt agccgggaag 661 gggcgagagt tctgcggggt gctcccgaag aggtgcggga actcatcgat gccacgccgt 721 ttgcgaaaaa atacacctcg ggggttctgt cttttgcaga gcagacactg ccaccgggag 781 agcgtgaaag ggtgatggag agctttgagc gggtactgat gcccggtctt gaaaaaaatc 841 agtacagcat cctgtgggtg gagcaccagg acaaggggcg tcttgagctg aattttgtca 901 tcccgaatat ggagctggcg agcggaaaac ggctccagcc ctattacgac cgggcggacc 961 gtccgcgaat caatgcctgg cagacactgg tgaatcacca ttacgggctg cacgacccga 1021 acgcaccgga gaacaggcgg acacttgtca ccccgaataa tctgccgaaa gcgaaacagg 1081 aggccgcaga agcgattacg aggggagtgg aggctcttta ccatgccgga gcgctaaaaa 1141 cgcgtcagga tgtcactgag gcgcttacag cggcaggttt tgaggtggtg aggacaacca 1201 ggagcagtat cagtatcgcc gacccggagg gcgggcgtaa tctcaggctg aaaggggcgc 1261 tgtatgagca atcttttaca aatggggaca gacttcgaga agaaactgaa agagcgtgcc 1321 gtctctacag agaacatgct gaacagcgag ttcaggaagc tcgaagcgtc tgtagacagg 1381 gaactgaact taaacgggca gaaaatcaga gacgctatca gcgcacacac agcagcggtg 1441 aaagaacaac tggagacgct gaacagtgcc gtgaacgcgc agttcagcgc cacagagaac 1501 gaacttgccc ggcggcagga agagctgctc tggaagctgg tcaaagggcg gatactgtac 1561 ccgtcgctga cggcgctttg cgtcacggtc gggatttttc tggcgtcatg ggggttgatt 1621 cagtggcagg aaagccgtat tgcggcgaac atcctggcta tcagggacca ggaagagacg 1681 ctggcgaaac tccgggaaaa aacatggggt gtgacgtatc acgagggcag gaacgggaaa 1741 tttctggtgt tgccgtccgg ggtgaagggg gaaaacaact ggacggtgga gaagaagaac 1801 gcagtaagac tggtcaggga gtaagtgagt atgacagagc tggaaatgca cttactgaac 1861 gccttagagc aattgcagca ggactatacg cagcggctga aagactggga gagcgccttc 1921 acggatttgc agcatatgtt cgagctgaca cgacaggaga acgggcaact gagggaacag 1981 tgcgacggct tgagtcagca ggtgcagaga ttagccgggc aggtggaccg cttgagtcgg 2041 ttatttatca cgaacagcag ataagggatg aacaggaaag gctggcacgc ctggaacggg 2101 agcgtgcgcg gtcctggcat gaagagcagg aacgggaagt acgggtatgg cgtggcccgt 2161 caatggggat gtgacggtga gttgttccgg gaggttgcca gatggtaccg gaacgcgtta 2221 aaaacgaatc cgggcgcgat tctggcgtgt cgtttttgtt gctgtgtttt gcctctttgc 2281 cagatcgcgc tcattcctca gcctcatccc gcgatgtctg cgtatgtcat caactgaaaa 2341 gatggaaaaa aaacagtgtc atgaggttta cgcaggcaaa accagcgtta ttcacatggc 2401 tgaatagcta tgcatacggt taaaatttat caggtgcgat cgcggcagct tttcgggtgg 2461 tttgttgcca tttttacctg tcagcagccg tgatcgcgct gaacgcattt cagcggtgcg 2521 tacaataagg ggttatgtta aataaccctt agcttagcgg cggcgcagtg gttgccaggt 2581 gaaggtgtca tccgggtcct gtccggcagt cagtgtggct tctcgatttt tgctggccgt 2641 tcgttcatca agaatggctt taagtatccg tgcccggagg cgtcgctttg tttcctgcgg 2701 cattttgtcc tttttcgtca gccccatggc acgagcttca gcggcaatgg cttctgccag 2761 tcggcgctct tcggcttcgg tcagtctatg gcgtttcatg gtggtctccg ggtgtttctc 2821 tggtgtcata acagtttaac tgttggctct ctccttatgc taatcagcct tctttcatgc 2881 ctgttgccat tgagtttaag aatgattggt tgtttttctt gagcgttttc acaaaaacgt 2941 aaatccagtg ggttgacagg atttacgagg tgacgtaact ttttactgta cataaaacca 3001 gtggttttat gtacagtttg ttgtttttaa cgcattgttt taaaagtcaa agaggtgttt 3061 ttatgagtga ttacgaaggt agtggtccga cagaaggtat tgattatggg cactcgatgg 3121 tcgtgtggcc gtcaacagga ctgatttcgg gtggtgatgt gaaaccagga ggctcatcag 3181 gtatcgctcc atccatgcct ccgggatggg gggattacag cccacagggt atcgcacttg 3241 tacaaagtgt tctttttccg ggaattattc gccggattat tctggataag gaacttgaag 3301 agggagactg gtcgggatgg tctgtcagtg tgcatagccc ttggggaaac gagaaagttt 3361 ccgctgcacg aacagttctt gagaatggtt tacgtggtgg tttgccagaa ccgtctcgcc 3421 cggctgctgt ttcttttgcc cgtctggagc ctgcttccgg aaatgagcaa aaaattattc 3481 gtcttatggt tacacagcaa ctggaacagg taacggatat tccggccagc cagttaccag 3541 cagcgggtaa taatgtaccg gtgaaatatc gtctgatgga ccttatgcag aacggtacgc 3601 aatatatggc tattatcgga ggtattccga tgacagtgcc ggtagttgat gccgttccag 3661 ttccggaccg gagtcgtccg ggaacaaata ttaaagatgt ttacagtgcc cctgtatcac 3721 caaatctacc ggacctggta ttaagtgtgg gtcagatgaa tactccggtt ctgtctaatc 3781 ccgaaattca ggaagaagga gttattgctg agacaggtaa ttatgttgag gctggttata 3841 cgatgtccag taataatcat gatgtcattg ttcgttttcc tgaaggcagt ggtgtttctc 3901 cgttatatat ttcaactgta gagattctgg acagtaatgg tctgagtcag cgtcaggaag 3961 ccgaaaataa agcaaaggat gatttcagag tcaagaaaga agaagcggta gcccgggctg 4021 aagctgaaaa agcaaaagcc gagttattta gtaaagcagg tgtgaaccag cctcctgtat 4081 atacacagga aatgatggaa agggctaatt cagtaatgaa tgagcaggga gctcttgttc 4141 tgaataacac tgccagttct gtacaactgg cgatgaccgg aactggtgtc tggactgctg 4201 ctggtgatat tgcaggcaac ataagcaagt ttttcagtaa tgctctggag aaagtaacca 4261 tacccgaagt gagtcccctg cttatgcgga tttctcttgg tgctctgtgg tttcattcag 4321 aagaagctgg agcaggaagt gatatcgtgc cggggcgaaa tctggaggcg atgttttcgc 4381 tgagtgctca gatgttggct ggacagggcg tggtcattga acctggtgcg acgagtgtaa 4441 atctgcctgt tcgtggacaa ttgataaaca gtaacgggca attagctctg gatttactga 4501 aaacagggaa tgaaagtatc ccagctgcgg ttcctgttct taatgctgtc cgtgatacag 4561 caacaggact ggataaaatc acgttaccag cagtagtagg cgcaccttcc cggacgattc 4621 tggttaatcc ggtaccacaa ccttcggtgc caacagatac aggtaatcat caacccgttc 4681 cggttacacc agtgcataca ggaacggaag taaaaccggt cgaaatgcca gtaacgacga 4741 ttactcctgt ttctgatgtt ggtggactac gagattttat ttactggcgt cctgatgctg 4801 ctgggactgg tgttgaagct gtttatgtga tgcttaatga acctctggat tcagggcgat 4861 tttcgcgtaa acaacttgat aaaaaatata aacatgctgg tgattttggt attagtgata 4921 caaaaaagaa tcgtgaaact cttactaaat tcagggatgc tattgaggag catttatcgg 4981 ataaggatac agtagagaaa ggaacatacc gaagagaaaa aggttcaaaa gtttatttta 5041 atcctaatac gatgaatgtg gttataatta agtcaaatgg tgagttctta tctgggtgga 5101 aaataaatcc agatgcggat aatggtcgaa tttatttaga gacaggtgaa ctatgaacaa 5161 gatggcaatg atcgatttgg cgaaattatt tttagcttcg aaaattacag caattgagtt 5221 ttcagagcga atttgtgttg aacggagaag attgtatggt gttaaggatt tgtctccgaa 5281 tatattaaat tgtggggaag agttgtttat ggctgctgag cgatttgagc ctgatgcaga 5341 tagggctgat tatgaaattg atgataatgg acttaaggtt gaggtccgat ctatcttgga 5401 aaaatttaaa ttataatcat gagtgatttt aatatctggc atttaagtat aaatgtcaga 5461 tattcactca tgacaaggag atgtcatgaa aaaagagata gggggatcta tgattctcgt 5521 tcttgctgtt ttgtgtctga ctgcttgcca agctaactat gtaagagatg ttcagggtgg 5581 aacaattgct ccatcatcat cttcgaaact aatcggggtg gcggttcagt gaaaaatatt 5641 aaaggatctt cttgagatcc tttttttctg cgcgtaatct gctgcctgta aacgaaaaaa 5701 cccgccttgt ggcgggtcct tccgtccgat cagaagtctt cgacctcttc taatcggcgg 5761 tggtaactgg cttggaggag cacagtcacc aaaactgtct tttcagttta gccttaactg 5821 gttcataact tcaagagcaa ctcctctaaa tcagttacca atggctgctg ccagtggcgt 5881 taagtcgtgt cttttccggg ttggccccaa gagaacagtt accggagaag gtgcagcagt 5941 cgggctgaac ggggggttcc tgcatacagc ccagcccgga gcgaactgcc taagtcgccc 6001 cgagatacca gaagacgtga gctatgagaa agcgccacgt gtcccgcaag ggagaaaggc 6061 ggaaaaggta tccggtaatc gatatggcgg gaacgtgggg gcgcaggagg gagcgattca 6121 ccggaaacgg tgatgatctt taagccacgt cgggtttcgc caccgctggc ggatttcatg 6181 gttgagcctc atggctccca cagatgcaca gaaaaagcgt ctgttttgtg aagtccgtca 6241 ggggggcgga gcctatggaa aaacgccagc ggcgcgactt tttttgccct ttgccttttt 6301 gctcacatgt tctttccggc cttatcccct gattctgtgg ataacactat caccgctttt 6361 gagtgggcag ataccgctcg ccgcagccga acgaccgagc gtagcgagtc agtgagcgag 6421 gaagcggaaa agcgcctgga cgagcatttt ctccttacgc atctgtgcgg catttcacac 6481 ccgccatggc gcacttttca tacaattctc actgatgcca tatgattaag ccagtataca 6541 ctccgctatc gctatgtgac tgggtcatgg ctgcgccccg acacccgcta aaacccgctg 6601 acgcgccctg acgggcttgt ctgctcccgg catccgctca caggccagct gtgaccgtct 6661 ccgggagctg cat //