LOCUS NC_013363 5686 bp DNA circular BCT 07-OCT-2009 DEFINITION Escherichia coli O26:H11 str. 11368 plasmid pO26_3, complete sequence. ACCESSION NC_013363 VERSION NC_013363.1 GI:260751828 DBLINK Project:41021 KEYWORDS . SOURCE Escherichia coli O26:H11 str. 11368 ORGANISM Escherichia coli O26:H11 str. 11368 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. REFERENCE 1 AUTHORS Ogura,Y., Ooka,T., Iguchi,A., Toh,H., Asadulghani,M., Oshima,K., Kodama,T., Abe,H., Nakayama,K., Kurokawa,K., Tobe,T., Hattori,M. and Hayashi,T. TITLE Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli JOURNAL Proc. Natl. Acad. Sci. U.S.A. 106 (42), 17939-17944 (2009) PUBMED 19815525 REFERENCE 2 (bases 1 to 5686) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (07-OCT-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5686) AUTHORS Hattori,M., Toh,H., Oshima,K., Yamashita,A., Hayashi,T., Ogura,Y. and Ooka,T. TITLE Direct Submission JOURNAL Submitted (21-DEC-2008) Contact:Masahira Hattori University of Tokyo, Graduate School of Frontier Sciences; 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8562, Japan URL :http://www.cb.k.u-tokyo.ac.jp/hattorilab/ COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..5686 /organism="Escherichia coli O26:H11 str. 11368" /mol_type="genomic DNA" /strain="11368" /serovar="O26:H11" /db_xref="taxon:573235" /plasmid="pO26_3" /note="enteropathogenic Escherichia coli" gene 3..140 /locus_tag="ECO26_p3-1" /db_xref="GeneID:8470643" CDS 3..140 /locus_tag="ECO26_p3-1" /codon_start=1 /transl_table=11 /product="putative mobilization protein 1" /protein_id="YP_003232550.1" /db_xref="GI:260751829" /db_xref="GeneID:8470643" /translation="MSEVFTVIPETCEAAAVKLIGVVVKRFTDICLFICVQFVKFLQQ R" gene complement(6..197) /locus_tag="ECO26_p3-2" /db_xref="GeneID:8470638" CDS complement(6..197) /locus_tag="ECO26_p3-2" /codon_start=1 /transl_table=11 /product="putative RNA I inhibition modulator protein Rom" /protein_id="YP_003232551.1" /db_xref="GI:260751830" /db_xref="GeneID:8470638" /translation="MTKQEKTALNMARFIRGQTLTLLEKLNELDADEQADICESLHDH ADELYRSCLARFGDDGENL" gene 262..585 /locus_tag="ECO26_p3-3" /db_xref="GeneID:8470639" CDS 262..585 /locus_tag="ECO26_p3-3" /codon_start=1 /transl_table=11 /product="putative mobilization protein 2" /protein_id="YP_003232552.1" /db_xref="GI:260751831" /db_xref="GeneID:8470639" /translation="MLTIRVTDDEHARLLERCEGKQLAVWMRRVCLGEPVARSGKLPT LAPPLLRQLAAIGNNLNQTARKVNSGQWSSGDRVQVVAALMAIGDELRRLRLAVREQG TRDDS" gene 575..2128 /locus_tag="ECO26_p3-4" /db_xref="GeneID:8470640" CDS 575..2128 /locus_tag="ECO26_p3-4" /codon_start=1 /transl_table=11 /product="mobilization protein MbeA" /protein_id="YP_003232553.1" /db_xref="GI:260751832" /db_xref="GeneID:8470640" /translation="MIVKFHARGKGGGSGPVDYLLGRERNREGATVLQGNPEEVRELI DATPFAKKYTSGVLSFAEKELPPGGREKVMASFERVLMPGLEKNQYSILWVEHQDKGR LELNFVIPNMELQSGKRLQPYYDRADRPRIDAWQTLVNHHYGLHDPNAPENRRILTLP DNLPKTKQALAESVTRGIDALYHVGEIKGRQDVIQALTEAGIEVVRVTRSSISIAGPN GGRNIKLKGAFYEQSFTDGRGVREKAERESRIYRENAEQRVQEARRVCQRGCDLKRDE NQRRYSPVHSLDREIAGKTPGRGERGDDAAQEGRVKAGREYGHDVTGDSLSPVYSEWR DALVSWREDTGEPGRNQEAGRDIAETEREDMGRGVCAGREQEIPCPSVREISGGDSLS GERVGTSEGVTQSDRAGNTFAERLRAAATGLYAAAERMGERLRGIAEDVFAYATGQRD AERAGHAVESAGAALERADRTLEPVIQRELEIREERLIQEREHVLSLERERQPEIQER TLDGPSLGW" gene complement(2405..3535) /locus_tag="ECO26_p3-5" /db_xref="GeneID:8470641" CDS complement(2405..3535) /locus_tag="ECO26_p3-5" /note="type II restriction modification system" /codon_start=1 /transl_table=11 /product="putative DNA modification methylase" /protein_id="YP_003232554.1" /db_xref="GI:260751833" /db_xref="GeneID:8470641" /translation="MTVKNNYLNRGYLVTSTTQAKKIAKLHLEKLDLADKFSFGLPEV DDRYHVWRVPLVATGHRIGEIVINSKTSTIDYKKSSKSPFLIKKAMEVVHTPKKVKKE KKIISKSPLNNMLLQGNCAETLKKLPDESVNLVFTSPPYYNAKPEYSEYHTYDEYLSL LRSVIKECHRVLSEGRFFVINVSPVLIRRASRNEASKRIAVPFDLHRLFIEEGYEFID DIHWVKPEGAGWALGRGRRFAADRNPLQYKPVPVTEYILVYRKKTDKLIDWNIRNHHS KEDVFDSKIGDDYEKTNLWKINPSRNRKHPATFPYGLAERVIKYYSFKNDVILDPFAG SGTTAKAAIDLGRRFVMCEISKQYIDLIIEGTMLGGDLKIIN" gene 3612..4679 /locus_tag="ECO26_p3-6" /db_xref="GeneID:8470642" CDS 3612..4679 /locus_tag="ECO26_p3-6" /note="type II restriction modification system" /codon_start=1 /transl_table=11 /product="putative restriction enzyme" /protein_id="YP_003232555.1" /db_xref="GI:260751834" /db_xref="GeneID:8470642" /translation="MNFKDKNCFPNELIALAKISKNDVLDKFGTDVFKKVVYDVLTGK NVREFTEILTRTRLLESNLSFFDFFVDKMKEGITPKQLYLYAKNALSNKSYVKSNQPV LEWMVMMTNKQTQNVLRDEHGDGFDRLALRTQEEILKIKNGYEDKIGEISIGGQKVSL EDFCYIILSLGSQTLTIRGSEKSLHGKYFEKLILGSLFTIMGFEYKEKIEEGLNAKCF TLSTRADDRESDATLVFNGKAIRVDIGFIGRGNTEISLDKVSRFRRMDDIGGVMHNIS TMVIVDVIGDRSRIVNMAEEIDGKVVAMSDPYWVAKVSSYISSKLNVDDLLEDKPQLK DIQSFISDALENVDLEKYIKL" ORIGIN 1 atgtgtcaga ggttttcacc gtcatccccg aaacgtgcga ggcagctgcg gtaaagctca 61 tcggcgtggt cgtgaagcga ttcacagata tctgcctgtt catctgcgtc cagttcgtta 121 agtttctcca gcagcgttaa tgtctggcct ctgatgaaac gggccatgtt aagggcggtt 181 ttttcctgtt tagtcactga tgcctccgtg taagggggat ttctgttcat gggggtaatg 241 ataccgatga aacgcgagag gatgctcacg atacgggtta ctgatgatga acatgcccgg 301 ttactggaac gctgtgaggg taaacaactg gcggtatgga tgcggcgggt ctgcctgggt 361 gagccggttg cccgttccgg gaagctgccg acactggctc cgccgttact gcgtcagctg 421 gccgccatcg ggaataacct gaatcagaca gcgaggaagg tgaacagcgg acagtggtct 481 tccggtgacc gggttcaggt agtggccgca ctgatggcca tcggggatga gctgcgccgg 541 ctgcgtctgg ccgtcaggga acaggggacg cgggatgata gttaaatttc atgccagggg 601 aaaaggtggt ggcagtggtc cggttgatta cctgctggga agggagcgta accgggaagg 661 ggcaacggtg cttcagggta atccggaaga agtccgggaa ctcatcgatg ccacgccatt 721 tgcgaagaaa tacacgtcag gtgttctgtc gttcgcggag aaggagctgc cgccgggagg 781 acgtgaaaaa gtgatggcga gctttgagcg tgtactgatg cccggtctcg aaaaaaatca 841 gtacagcatc ctgtgggtgg agcaccagga caagggacgg cttgagctga attttgtcat 901 tccgaacatg gagctacaga gcggaaaacg cctccagccg tactacgacc gggcagacag 961 gccgagaatt gatgcctggc agacgctggt taatcaccat tacgggctgc atgaccccaa 1021 cgccccggag aaccgccgga tactgactct ccctgataac ctgccgaaaa cgaaacaggc 1081 gcttgcagag agcgtcacgc gcgggataga cgctctttat catgtcgggg agataaaagg 1141 ccgtcaggat gtgattcagg cgctcacgga ggcagggatt gaagtggtca gggtgacgcg 1201 aagcagtatc agcattgcag gcccgaacgg cgggaggaat atcaagctga aaggagcatt 1261 ttatgagcaa tcttttacag acgggcgcgg agttcgagaa aaagctgaaa gagagagccg 1321 aatctacaga gaaaatgctg aacaacgagt tcaggaggct cggcgagtct gtcagcgagg 1381 ctgtgacctc aaacgagacg aaaatcagag acgctatagc cctgttcaca gcctcgacag 1441 agaaatcgct ggaaaaacac cgggaagggg tgaaagaggc gatgatgcag cacaggaagg 1501 acgtgttaaa gctggcaggg aatacgggca tgatgttact ggggatagtc tttctcctgt 1561 ttacagcgag tggcgggacg ctctggtatc ttggagggag gatacaggcg aacctggaag 1621 aaatcaggaa gcaggaagag acattgcaga aactgaacgc gaagacatgg ggcgtggagt 1681 ttgtgcagga cgggaacagg aaattccttg tccttccgta cgggaaatca gcggaggtga 1741 ttccctttca ggggaaagag tgggtacatc tgaaggagtg acacagagtg acagagctgg 1801 aaacacattt gctgaacgcc ttagagcagc tgcaacagga ctatatgcag cggctgagcg 1861 aatgggagag cgccttcgtg gaattgcaga agatgttttc gcttacgcaa cgggacaacg 1921 cgatgctgaa cgagcgggtc atgcagttga gtcagcaggt gcagcacttg agcgagcaga 1981 cagaacgctt gagccagtta tacagcgaga actggagata agagaggaac ggctgataca 2041 ggagcgcgaa catgtgttat ccctggaacg ggagcgtcag ccggaaatac aggaacgcac 2101 gctggatggc ccttcgctgg gatggtgaaa ccatgaaaaa tggcaggtta agtggattaa 2161 gacaggctaa tgtggtctgt accatctggt tgcataggta ttcatgcggt taaaatttat 2221 caggcgcgat tgcggcagtt tttcgggggg tttgttgcca tttttacctg tctgctgctg 2281 tgatcgcgct gaacgcgttt tggcggtgcg tacaattaag ggattatggt aaattcgaca 2341 atgtggctga tgttgacgcg taaataagcc gccttaaggc ggcttttacc acagtaaagt 2401 ttgattaatt tatgattttt aaatcaccac ctagcatggt tccttctatg atcagatcaa 2461 tatactgctt tgatatctca cacatcacaa atcttctgcc taaatcaatt gctgcttttg 2521 ctgttgttcc cgatccagca aaaggatcta aaataacatc atttttgaaa gaatagtatt 2581 ttataactct ttctgccaga ccgtatggaa atgtagcagg atgttttctg ttacgagatg 2641 gatttatttt ccataggttt gtcttttcgt aatcgtcgcc gatttttgag tcaaaaacat 2701 cctctttgct atgatggttt cttatgttcc aatctattaa tttatcagtt ttttttctgt 2761 aaacaagaat gtactcagtt actggtactg gtttatattg caacggattg cggtcagctg 2821 cgaatcgacg gcctctacct aaagcccagc cagctccttc tggtttaacc caatgtatat 2881 catctatgaa ttcatagcct tcttctataa ataacctgtg caagtcaaaa ggaacagcta 2941 ttctttttga tgcttcattc cgtgacgccc ttcttattaa aacgggcgag acattgatga 3001 cgaaaaaacg accttcgctt aaaactctat ggcactcttt tattactgaa cgcaatagag 3061 agaggtattc atcatatgta tgatattcgg aatactctgg tttggcattg taatatggcg 3121 gtgatgtgaa tactaagttc actgattcat caggtaattt tttcaaggtc tccgcgcagt 3181 tgccttgtag taacatgtta tttaatggtg actttgatat gatttttttt tcttttttta 3241 ccttttttgg ggtatggaca acctccattg ctttcttaat aagaaatgga gacttcgaac 3301 ttttcttata atcaatagtt gacgtttttg aatttataac tatttcacca atcctgtggc 3361 ctgtcgctac taatggtaca cgccatacat ggtaccgatc atcgacttca ggtaacccaa 3421 aggaaaattt atcagctaag tctaatttct ctaggtgcaa ctttgctatt tttttcgcct 3481 gagtcgtaga ggttaccaaa taacctctgt ttaagtaatt gtttttaact gtcatttttc 3541 ctaactatcg atctgttacc atacaacctg ctatcttagc atctcatttt tactatgtcc 3601 atggtgagga tatgaatttc aaggataaaa attgtttccc taacgaactc atagcgttgg 3661 cgaaaatttc aaaaaatgat gttttagata agttcggaac ggatgttttt aaaaaggttg 3721 tttatgatgt tttaacaggt aaaaatgttc gcgaattcac tgaaatacta actcgtacta 3781 gattgttaga aagcaatctc tctttttttg acttttttgt ggataaaatg aaagaaggga 3841 taacgccaaa gcagctttat ctctatgcaa aaaatgcatt atcgaacaag tcttatgtta 3901 agtctaatca acctgttctc gagtggatgg ttatgatgac aaataaacag acccaaaatg 3961 ttttaagaga tgagcatggg gatggttttg atagacttgc tttaaggacg caagaagaaa 4021 tacttaaaat aaaaaacggg tatgaagata aaattggaga gatatctatt ggtgggcaaa 4081 aggtgtcttt agaagatttt tgctatatta ttttatctct tggttcgcaa actttaacta 4141 ttaggggatc tgagaaatct cttcatggta aatattttga aaagctaata ctcggttctt 4201 tatttacaat aatgggtttt gaatataaag aaaaaattga agaagggtta aatgctaaat 4261 gttttactct ttcaacaaga gctgatgaca gggagtctga tgctactctt gtttttaatg 4321 ggaaggcgat tagggttgac attggtttta ttggtagggg taacacagaa ataagtttgg 4381 ataaagtatc tagatttaga cgaatggatg atattggcgg agtgatgcat aatataagca 4441 caatggttat tgttgacgtt attggtgata gaagtagaat agttaatatg gctgaagaga 4501 ttgatggtaa agttgttgcg atgagtgatc cgtattgggt tgcaaaggtc tcttcctata 4561 ttagttcgaa actgaatgta gatgatcttt tagaggataa acctcaactt aaagacatac 4621 agtcttttat atctgatgca ttagagaatg tagatctgga aaaatacatt aaattataag 4681 agattgtaat ccttgactgc gtgcttatta aaagcataat ctctacataa agaaaaacca 4741 ccctggcagg tggtttttca aaggttagct aatcctggca gattatctaa ccaggtaatc 4801 tggcttaagc agagcgcaga ccaccaaaac ttgttcttct agtgtagcca gaatcaggct 4861 gatacttcaa gaactctgtt accaacttat aaatctcgct ctgctaaccc ggttaccaat 4921 ggctgctgcc agtggcgttt ttacgtgtct ttccgggttg gactcaagac gatagttacc 4981 ggataaggcg cagcggtcgg gctgaacggg gggttcgtgc acacagccca gcttggagcg 5041 aacgacctac accgagccga gataccaaca gcgtgagcta tgagaaagcg ccacgcttcc 5101 cgaagggaga aaggcggaga ggtatccggt aagcggcagg gtcggaacag gagagcgcac 5161 gagggagctt ccagggggaa acgcctggta tctttatagt cctgtcgggt ttcgccacct 5221 ctgacttgag cgtcgatttt tgtgatgctc gtcagggggg cggagcctat ggaaaaaacg 5281 ccagcggcgc ggcttttttt gccctttgtc tttttgctca catgttcttt ccggccttat 5341 cccctgattc tgtggataac cgtattgccg tttttgagca agcagactcc gctcgccgca 5401 gtcgaacgac cgagcgcagc gagtcagtga gcgaggaagc ggaaaagcgc ctggacgtgc 5461 attttctcct tacgcatctg tgcggcattt cacacccggc atggtgcact tttcatacaa 5521 tgcgccctga tgccgaataa gtaagccagt atacactccg ctatcgctac gtgactgggt 5581 cagggctgcg ccccgacacc cgctaaaacc cgctgacgcg tcctgacggg cttgtcggct 5641 cccggcatcc gctcacagac aagctgtgac cgtttccggg agctgc //